BLASTP 2.2.22 [Sep-27-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.


Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,  
Eugene V. Koonin, and Stephen F. Altschul (2001), 
"Improving the accuracy of PSI-BLAST protein database searches with 
composition-based statistics and other refinements",  Nucleic Acids Res. 29:2994-3005.

Query= gi|255764505|ref|YP_003065248.2| polysialic acid capsule
expression protein [Candidatus Liberibacter asiaticus str. psy62]
         (341 letters)

Database: nr 
           14,124,377 sequences; 4,842,793,630 total letters

Searching..................................................done


Results from round 1


>gi|255764505|ref|YP_003065248.2| polysialic acid capsule expression protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254547856|gb|ACT57308.2| polysialic acid capsule expression protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 341

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI
Sbjct: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW
Sbjct: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI
Sbjct: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI
Sbjct: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT
Sbjct: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII
Sbjct: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341


>gi|315122735|ref|YP_004063224.1| polysialic acid capsule expression protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496137|gb|ADR52736.1| polysialic acid capsule expression protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 323

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 257/322 (79%), Positives = 288/322 (89%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +Q AL+SI  EK+GLSSLESSL GELS  F  AVEKIKAI+GRVV+TGIGKSGHI
Sbjct: 1   MSNLAIQSALQSIEIEKKGLSSLESSLLGELSSHFSRAVEKIKAIRGRVVVTGIGKSGHI 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLAST ASTGTPSFFVHAAEA+HGDLGMIT+DD+II LSWSG S+ELKAIL +ARRFS
Sbjct: 61  GSKLASTFASTGTPSFFVHAAEANHGDLGMITQDDVIIALSWSGESNELKAILCHARRFS 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLIAITSENKS+VACHADIVL LPKEPE+CP+GLAPTTS IMQLAIGDALA+AL+E+ N
Sbjct: 121 IPLIAITSENKSIVACHADIVLKLPKEPEACPYGLAPTTSTIMQLAIGDALAMALMEAEN 180

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+ENDFY LHPGGKLG+LF CA+DVMH+G  +PLVK+G  LIDAI +LSEKRFGC+AVVD
Sbjct: 181 FTENDFYALHPGGKLGSLFTCATDVMHTGTRLPLVKMGSLLIDAIPVLSEKRFGCIAVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E Q+LKGI+TEGDIFRNF K+LN L+VED+M KNPKVI EDTLLTV+MQ L+QHNISVLM
Sbjct: 241 EDQRLKGIVTEGDIFRNFRKNLNVLTVEDIMTKNPKVISEDTLLTVSMQFLKQHNISVLM 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD  QK IGIVHFLDLLRFGI
Sbjct: 301 VVDANQKIIGIVHFLDLLRFGI 322


>gi|218674867|ref|ZP_03524536.1| KpsF/GutQ family protein [Rhizobium etli GR56]
          Length = 331

 Score =  390 bits (1003), Expect = e-106,   Method: Compositional matrix adjust.
 Identities = 193/330 (58%), Positives = 248/330 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++   L++NS ++ A R+I  EKRGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNKRAVKLVENSVLESAKRTIETEKRGLEALERAFHNGLAVPFSRAVETIGNISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+FFVHAAEA+HGDLGMI + D+II +SWSG + ELKAI
Sbjct: 61  GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQSDVIIAISWSGQAQELKAI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L Y+RRFSIPLIAIT + +S +   ADIVL LPKE E+CPHGLAPTTSAIMQLAIGDALA
Sbjct: 121 LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKEIEACPHGLAPTTSAIMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R FS  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFSATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTILATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+VVDD  + +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVVDDDSRPVGLVHFHDLLRIGV 330


>gi|209550883|ref|YP_002282800.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536639|gb|ACI56574.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 331

 Score =  379 bits (974), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 187/330 (56%), Positives = 248/330 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+FFVHAAEA+HGDLGMI + D II +SWSG + ELKAI
Sbjct: 61  GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L Y+RRFSIPLIAIT + +S +   ADIVL LPKE E+CPHGLAPTTSAIMQLAIGDALA
Sbjct: 121 LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACPHGLAPTTSAIMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G  + +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D   +L GI+TEGD+ RN  ++L+ L+V+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+  + +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDEDHRPVGLVHFHDLLRIGV 330


>gi|222087080|ref|YP_002545615.1| polysialic acid capsule expression protein [Agrobacterium
           radiobacter K84]
 gi|221724528|gb|ACM27684.1| polysialic acid capsule expression protein [Agrobacterium
           radiobacter K84]
          Length = 331

 Score =  379 bits (972), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/330 (55%), Positives = 238/330 (72%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++    ++N  ++ A+R+I  E++GL +LE +L   L+  F  AVE I  I GRV+IT
Sbjct: 1   MNKRAVKFIENGAIESAMRTIEIERQGLEALERALADGLAEPFSRAVEVIGGIDGRVIIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA++ ASTGTPSFFVH  EA+HGDLGMIT+DD+II +SW G S EL+ I
Sbjct: 61  GVGKSGHIGNKLAASFASTGTPSFFVHPVEANHGDLGMITQDDVIIAISWGGESAELRGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y+RRFSIP+IAIT+   S +A  +D+VL LPKE E+CPHGLAPTTS ++QLAIGDAL 
Sbjct: 121 ISYSRRFSIPMIAITAGETSTLARESDVVLLLPKEQEACPHGLAPTTSTLLQLAIGDALV 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF   HPGGKLG       D+MH GD +PLV +G  + +A   LS  R
Sbjct: 181 VALLEARGFTAEDFRTFHPGGKLGASLSHVVDIMHKGDRVPLVNLGTGMQEAAMTLSNMR 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D+   L GIIT+GDI RN    L  + V++VM +NPK + E TL T AM LL 
Sbjct: 241 FGCVGVIDDDGCLCGIITDGDIARNLGGSLAEMRVDEVMTRNPKTVKETTLATGAMALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++NIS LMVVD+ ++ IGIVHF DLLR G+
Sbjct: 301 RYNISALMVVDETKRPIGIVHFHDLLRIGV 330


>gi|241206297|ref|YP_002977393.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860187|gb|ACS57854.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 331

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/330 (55%), Positives = 246/330 (74%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVISDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEGSSLAAAADIVLLMPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +DVMH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADVMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEDGRLCGIVTEGDMARNLTRNLAELTVDDIMTRTPKTVKPTVLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDDDRRPVGLVHFHDLLRIGV 330


>gi|116253816|ref|YP_769654.1| arabinose 5-phosphate isomerase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258464|emb|CAK09568.1| putative arabinose 5-phosphate isomerase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 331

 Score =  375 bits (962), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 183/330 (55%), Positives = 247/330 (74%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I +E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIESERRGLEALEQAFDNGLAGPFTRAVEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEGSSLAAAADIVLLIPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  LSV+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEDGRLCGIVTEGDMARNLTRNLAELSVDDIMTRTPKTVRPTVLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDDDRRPVGLVHFHDLLRIGV 330


>gi|190893387|ref|YP_001979929.1| arabinose 5-phosphate isomerase (involved in capsule formation)
           [Rhizobium etli CIAT 652]
 gi|190698666|gb|ACE92751.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli CIAT 652]
          Length = 331

 Score =  370 bits (949), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/330 (55%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+VVDD ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVVDDDRRPLGLVHFHDLLRIGV 330


>gi|327189614|gb|EGE56764.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli CNPAF512]
          Length = 331

 Score =  369 bits (948), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/330 (54%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIDIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVIDDDRRPLGLVHFHDLLRIGV 330


>gi|218459106|ref|ZP_03499197.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli Kim 5]
          Length = 331

 Score =  368 bits (944), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 180/330 (54%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGEHSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERVPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+ ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVIDEDRRPLGLVHFHDLLRIGV 330


>gi|163867471|ref|YP_001608670.1| sugar isomerase [Bartonella tribocorum CIP 105476]
 gi|161017117|emb|CAK00675.1| sugar isomerase [Bartonella tribocorum CIP 105476]
          Length = 330

 Score =  367 bits (941), Expect = 2e-99,   Method: Compositional matrix adjust.
 Identities = 179/319 (56%), Positives = 231/319 (72%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              V  AL+++ +EK+GL +LE++L G LS  F  AV+ I+  +G VVITG+GKSGHIG+
Sbjct: 11  QGAVASALKTLASEKQGLEALEAALLGSLSSSFEAAVQTIRNARGHVVITGLGKSGHIGT 70

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ YA RF IP
Sbjct: 71  KIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETQELSGIMSYAARFRIP 130

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA++LLE R F+
Sbjct: 131 LIAITSSEHSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALAVSLLEMRGFT 190

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF + HPGG LG       D+MH GD IPLV  G  + +A+ +L EK FGCV V+++ 
Sbjct: 191 ATDFKIYHPGGSLGASLKYVCDIMHEGDCIPLVMQGTAMTEAMNVLVEKHFGCVGVINQK 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GD+ RN H +L+  +V++VM K PKV+  +TL+  AM  +  H+I    VV
Sbjct: 251 GELIGIVTDGDLARNIHFNLSKFNVDEVMTKAPKVVKPNTLVGAAMAFINDHHIGAFFVV 310

Query: 321 DDCQKAIGIVHFLDLLRFG 339
           +D +K IGIVHF DLLR G
Sbjct: 311 ED-KKPIGIVHFHDLLRIG 328


>gi|86359150|ref|YP_471042.1| polysialic acid capsule expression protein [Rhizobium etli CFN 42]
 gi|86283252|gb|ABC92315.1| polysialic acid capsule expression protein [Rhizobium etli CFN 42]
          Length = 331

 Score =  365 bits (938), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 181/330 (54%), Positives = 242/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++NS ++ A R+I  EK GL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAIKLVENSVLESAKRTIETEKHGLEALERAFDNGLAGPFTRAVEIIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGTKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEASSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGEKLPLVVKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D   +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDPDGRLCGIVTEGDMARNLSRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+  + IG+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDEDSRPIGLVHFHDLLRIGV 330


>gi|49474989|ref|YP_033030.1| polysialic acid capsule expression protein [Bartonella henselae
           str. Houston-1]
 gi|49237794|emb|CAF26988.1| Polysialic acid capsule expression protein [Bartonella henselae
           str. Houston-1]
          Length = 331

 Score =  365 bits (936), Expect = 7e-99,   Method: Compositional matrix adjust.
 Identities = 178/327 (54%), Positives = 235/327 (71%), Gaps = 1/327 (0%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           +  H L+  STV  A ++I +EK+GL +LE +L G LS  F  AV+ I+   G VVITG+
Sbjct: 4   QSSHMLVLQSTVTSAFKTIASEKQGLEALEEALLGYLSSAFQAAVQTIRNANGHVVITGL 63

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ 
Sbjct: 64  GKSGHIGAKIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETSELSGIIN 123

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +A RF  PLIA+TS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA+A
Sbjct: 124 HAARFRTPLIAMTSGEHSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALAVA 183

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           LLE R F+  DF + HPGG LG       D+MH G+SIPLV  G  +  A+++L EK FG
Sbjct: 184 LLEMRGFTATDFKIYHPGGSLGASLKYVRDIMHQGESIPLVAQGTAMAKAMSVLVEKHFG 243

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           CV VV++  +L GI+T+GD+ RN H +L+  +V+++M K+PK++  +TL+  A   + +H
Sbjct: 244 CVGVVNQEGELIGIVTDGDLARNIHVNLSKFNVDELMTKDPKIVEPNTLVGAATAFINEH 303

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +I    VV++ +K IGIVHF DLLR G
Sbjct: 304 HIGAFFVVEN-KKPIGIVHFHDLLRIG 329


>gi|332716507|ref|YP_004443973.1| capsule expression protein [Agrobacterium sp. H13-3]
 gi|325063192|gb|ADY66882.1| capsule expression protein [Agrobacterium sp. H13-3]
          Length = 331

 Score =  363 bits (931), Expect = 2e-98,   Method: Compositional matrix adjust.
 Identities = 172/323 (53%), Positives = 239/323 (73%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++++ ++ A+R+I  E+ GL++LE +L+  LS  F  A+E I    GR++ITG+GKSGH
Sbjct: 8   LVEDNAIESAVRTISMERAGLAALEEALRNGLSEPFCKAIETIGQSNGRLIITGVGKSGH 67

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI  DD+++ +S  G S EL++I+ Y+RRF
Sbjct: 68  IGAKLAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESSELRSIINYSRRF 127

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           SIPLIA+T    + +A  ADIVL +P E E+CP GLAPTTS +MQLA+GDALA+ALLE+R
Sbjct: 128 SIPLIALTCSESASLAKAADIVLLVPNEQEACPLGLAPTTSTLMQLALGDALAVALLEAR 187

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           NF+  DF V HPGGKLG      SD+MH+GD +PLV  G  + +A+++LS K FGCV ++
Sbjct: 188 NFTAGDFKVFHPGGKLGAGLTLVSDIMHTGDRVPLVGKGTSMPEAVSVLSRKHFGCVGIL 247

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +L GI+TEGD+ RN  ++L  L+V+D+M + PK + +  L T A+  L + +I  L
Sbjct: 248 DEDGRLCGIVTEGDMARNLSRNLAELTVDDIMTRTPKTVKKSVLATSALATLEKFHIGAL 307

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VVDD  + IG+VHF DLLR G+
Sbjct: 308 IVVDDDNRPIGLVHFHDLLRIGV 330


>gi|163758868|ref|ZP_02165955.1| putative arabinose 5-phosphate isomerase [Hoeflea phototrophica
           DFL-43]
 gi|162284158|gb|EDQ34442.1| putative arabinose 5-phosphate isomerase [Hoeflea phototrophica
           DFL-43]
          Length = 346

 Score =  362 bits (929), Expect = 5e-98,   Method: Compositional matrix adjust.
 Identities = 176/314 (56%), Positives = 228/314 (72%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R+I  E+ GL +L ++L+  LS  F  AVE + +I GRV++TG+GKSGH+G+K+A+TL
Sbjct: 32  AGRTIQTERTGLDALAAALENGLSEPFVRAVEALGSISGRVIVTGVGKSGHVGAKIAATL 91

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPS FVH AEA+HGDLGMITRDD IIVLSWSG + ELK IL Y+RRF IPLIA TS
Sbjct: 92  ASTGTPSQFVHPAEANHGDLGMITRDDAIIVLSWSGETAELKGILAYSRRFQIPLIAFTS 151

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
            + S +A  ADIVL LP+E E+CPHGLAPTTS +MQLA+GDALA+ALLES+ F+  DF+ 
Sbjct: 152 GSSSTLAREADIVLGLPREQEACPHGLAPTTSTLMQLALGDALAVALLESKGFTAGDFHT 211

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG      +DVMH+G ++PLV  G    DA+  LSE++FGCV V D    L GI
Sbjct: 212 FHPGGQLGANLAHVADVMHTGGAVPLVPSGTLAPDAVMTLSERKFGCVGVTDASGCLIGI 271

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T+GD+ RN  K+L    ++ +M +NPK I    L + AM +L ++ I  L+V D+ Q  
Sbjct: 272 VTDGDVARNLGKNLVDQPIDAIMTRNPKTIAPTALASTAMAILNKNAIGALIVTDENQMP 331

Query: 327 IGIVHFLDLLRFGI 340
           +GIVHF DLLR G+
Sbjct: 332 LGIVHFHDLLRIGV 345


>gi|240849843|ref|YP_002971231.1| sugar isomerase [Bartonella grahamii as4aup]
 gi|240266966|gb|ACS50554.1| sugar isomerase [Bartonella grahamii as4aup]
          Length = 330

 Score =  362 bits (928), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 177/316 (56%), Positives = 229/316 (72%), Gaps = 1/316 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  AL+++ +EK+GL +LE SL G LS     AV+ I+  +G VVITG+GKSGHIG+K+A
Sbjct: 14  VASALKTLASEKQGLEALEKSLLGTLSSSVEAAVQTIRNARGHVVITGLGKSGHIGTKIA 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVHAAEA+HGDLGMI  D++I+ LSWSG + EL  I+ YA RF IPLIA
Sbjct: 74  ATLASTGTPAFFVHAAEANHGDLGMIGSDNVILALSWSGETQELSGIMSYAARFRIPLIA 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA++LLE R F+  D
Sbjct: 134 MTSSEYSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALAVSLLEMRGFTATD 193

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F + HPGG LG       D+MH GD+IPLV  G  + +A+ +L EK FGCV VV++  +L
Sbjct: 194 FKIYHPGGSLGASLKYVCDIMHEGDNIPLVMQGTSMTEAMNVLVEKHFGCVGVVNQEGEL 253

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ RN H +L+  +V++VM K PKV+  +TL+  A   +  H+I    VV+D 
Sbjct: 254 IGIVTDGDLARNMHFNLSKFNVDEVMTKAPKVVKPNTLVGAATAFINDHHIGAFFVVED- 312

Query: 324 QKAIGIVHFLDLLRFG 339
           +K IGIVHF DLLR G
Sbjct: 313 KKPIGIVHFHDLLRIG 328


>gi|319408151|emb|CBI81804.1| sugar isomerase [Bartonella schoenbuchensis R1]
          Length = 331

 Score =  361 bits (927), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 176/318 (55%), Positives = 230/318 (72%), Gaps = 1/318 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  AL++I  EK+GL +LE +L   LS  F  AV+ I   +G VVITG+GKSGHIG+K+A
Sbjct: 15  ITSALKTISREKQGLEALEKALSSYLSDSFKKAVQTISNAQGHVVITGLGKSGHIGTKIA 74

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVHAAEA+HGDLGMI+ DD+I+ LSWSG + EL  I+ +A RF IPLIA
Sbjct: 75  ATLASTGTPAFFVHAAEANHGDLGMISSDDVILALSWSGETMELSGIINHAARFRIPLIA 134

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   SV+   ADIVL LPK  E+CPHGLAPTTS +MQLA+GDALA+ALLE  +FS  D
Sbjct: 135 MTSGEHSVLGRKADIVLLLPKVEEACPHGLAPTTSTVMQLAMGDALAVALLERHDFSATD 194

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F + HPGG LG  F    D+MH GDS+PL+  G P+ +A+ IL EK FGCV V+++  +L
Sbjct: 195 FKIYHPGGSLGANFKYVRDIMHQGDSLPLIIQGAPMTEAVNILVEKHFGCVGVINQTGEL 254

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ RN H DL+  +V++VM K+PK +  DTL+  A   +  H I    V++D 
Sbjct: 255 IGIVTDGDLARNIHCDLSKFNVDEVMTKDPKNVTPDTLVGAATAFINDHQIGAFFVIED- 313

Query: 324 QKAIGIVHFLDLLRFGII 341
           +K +GIVHF DLLR G +
Sbjct: 314 KKPVGIVHFHDLLRIGAV 331


>gi|121602747|ref|YP_988655.1| KpsF/GutQ family sugar isomerase [Bartonella bacilliformis KC583]
 gi|120614924|gb|ABM45525.1| sugar isomerase, KpsF/GutQ family [Bartonella bacilliformis KC583]
          Length = 330

 Score =  361 bits (927), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 176/316 (55%), Positives = 233/316 (73%), Gaps = 1/316 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  AL++I +EK+GL+ LE +L   LS  F  AV+ I+  KGRVVITG+GKSGHIG+K+A
Sbjct: 14  VTSALKTISSEKQGLAVLEKALLKNLSHSFREAVQTIRDAKGRVVITGLGKSGHIGAKIA 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVHAAEA+HGDLGMI+  D+I+ +SWSG + EL  I+ YA+RF  PLIA
Sbjct: 74  ATLASTGTPAFFVHAAEANHGDLGMISFSDVILAVSWSGETTELSGIINYAKRFRTPLIA 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   S +   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA+ALLE R F+  D
Sbjct: 134 ITSGENSTLGRQADIVLLLPKVEEACPHGLAPTTSTIMQLAMGDALAVALLEMRGFTAID 193

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F + HPGG LG       D+MH GD+IPLV  G  + +A+++L EKRFGCV VV++  +L
Sbjct: 194 FKIYHPGGSLGARLKYVRDIMHQGDNIPLVIQGTLMTEAMSVLVEKRFGCVGVVNQQGEL 253

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ RN H+DL+  +V+++M K+PK++  D L+  A+  +  H+I    VV++ 
Sbjct: 254 IGIVTDGDLARNIHRDLSQFNVDEMMTKDPKILSPDALVGTAIAFIHDHHIGAFFVVEN- 312

Query: 324 QKAIGIVHFLDLLRFG 339
           +K +GIVHF DLLR G
Sbjct: 313 KKPVGIVHFHDLLRVG 328


>gi|15891176|ref|NP_356848.1| capsule expression protein [Agrobacterium tumefaciens str. C58]
 gi|15159530|gb|AAK89633.1| capsule expression protein [Agrobacterium tumefaciens str. C58]
          Length = 331

 Score =  361 bits (926), Expect = 1e-97,   Method: Compositional matrix adjust.
 Identities = 172/323 (53%), Positives = 238/323 (73%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++++ ++ A+R+I  E+ GL++LE +L+  LS  F  A+E I    GR++ITG+GKSGH
Sbjct: 8   LVEDNAIESAVRTISMERAGLAALEDALRNGLSEPFCKAIETIGQSNGRLIITGVGKSGH 67

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI  DD+++ +S  G S EL++I+ Y+RRF
Sbjct: 68  IGAKLAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESAELRSIINYSRRF 127

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           SIPLIA+T    S +A  +DIVL +P E E+CP GLAPTTS +MQLA+GDALA+ALLE+R
Sbjct: 128 SIPLIALTCSENSSLARASDIVLLVPNEQEACPLGLAPTTSTLMQLALGDALAVALLEAR 187

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           NF+  DF V HPGGKLG      SD+MH+GD +PLV  G  + +A+ +LS K FGCV ++
Sbjct: 188 NFTAGDFKVFHPGGKLGASLTLVSDIMHTGDRVPLVNKGTAMPEAVGVLSRKHFGCVGIL 247

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +L GI+TEGD+ RN  ++L  L V+D+M ++PK + +  L T A+  L + +I  L
Sbjct: 248 DEDGRLCGIVTEGDMARNLSRNLAELVVDDIMTRSPKTVKKSVLATSALATLEKFHIGAL 307

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VVDD  + IG+VHF DLLR G+
Sbjct: 308 IVVDDDNRPIGLVHFHDLLRIGV 330


>gi|319404609|emb|CBI78215.1| sugar isomerase [Bartonella rochalimae ATCC BAA-1498]
          Length = 331

 Score =  360 bits (924), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 180/328 (54%), Positives = 228/328 (69%), Gaps = 1/328 (0%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           +  ++L   + V  AL++I  EKRGL  LE + Q +L+  F  AV+ I    G VVITG+
Sbjct: 4   QSSNTLNLQNAVILALKTISIEKRGLEVLEKAFQEKLADSFKAAVQAISNANGHVVITGL 63

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ 
Sbjct: 64  GKSGHIGTKIAATLASTGTPAFFIHAAEANHGDLGMICSDDVILALSWSGETTELSGIIS 123

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +A RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL IGDALAIA
Sbjct: 124 HAARFRIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTTSTTMQLVIGDALAIA 183

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           LLE R F+  DF + HPGG LG       D+MH GD +PLV  G P+  A+ IL EK FG
Sbjct: 184 LLEMRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVTQGVPMTAAMEILVEKHFG 243

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           CV VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   +  H
Sbjct: 244 CVGVVNPRGELIGIITDGDLARNIHNDLSQFNVDEVMTKNPKTVGPDTLVGAATAFINDH 303

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +I    V+++ +K IGIVHF DLLR G+
Sbjct: 304 HIGAFFVIEN-KKPIGIVHFHDLLRIGV 330


>gi|239834502|ref|ZP_04682830.1| sugar isomerase, KpsF/GutQ family [Ochrobactrum intermedium LMG
           3301]
 gi|239822565|gb|EEQ94134.1| sugar isomerase, KpsF/GutQ family [Ochrobactrum intermedium LMG
           3301]
          Length = 361

 Score =  359 bits (921), Expect = 4e-97,   Method: Compositional matrix adjust.
 Identities = 173/312 (55%), Positives = 231/312 (74%), Gaps = 1/312 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E  GLS+LE +L   LS  F  AV+ I A +GR+V+TG+GKSGHIGSKLA+T A
Sbjct: 49  LRTIKTENAGLSALEDALNNGLSAPFVEAVKLIVASRGRLVVTGVGKSGHIGSKLAATFA 108

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT +FFVH+AEA+HGDLGMI RDD+I+ +SWSG + ELK I+ Y++RF IPLIAIT+ 
Sbjct: 109 STGTSAFFVHSAEANHGDLGMIGRDDVILAISWSGETAELKGIVNYSQRFRIPLIAITAG 168

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ +DF   
Sbjct: 169 ENSALGRAADVVLLLPKTAEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTPSDFKTF 228

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG LG   +   D+MH G+ +PLVK+G  + DA+ +L++K FGCV VVD+G  L GI+
Sbjct: 229 HPGGSLGASLIHIRDIMHRGERLPLVKMGTSMPDAMKVLAQKSFGCVVVVDDGGDLAGIV 288

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T+GDI RN  ++L  LSV+++M + PK + ++ L T A+  + +++I  L+VV +  + I
Sbjct: 289 TDGDISRNLSRNLAALSVDEIMTRKPKTVDQNMLATAALNTINENHIGALIVV-EAGRPI 347

Query: 328 GIVHFLDLLRFG 339
           G+VHF DLLR G
Sbjct: 348 GLVHFHDLLRIG 359


>gi|306841148|ref|ZP_07473864.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO2]
 gi|306288774|gb|EFM60092.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO2]
          Length = 333

 Score =  358 bits (920), Expect = 5e-97,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 236/318 (74%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK+G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKMGTPMPDAMKVLAQKSFGCVIVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN +++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLNRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|260460633|ref|ZP_05808884.1| KpsF/GutQ family protein [Mesorhizobium opportunistum WSM2075]
 gi|259033738|gb|EEW34998.1| KpsF/GutQ family protein [Mesorhizobium opportunistum WSM2075]
          Length = 333

 Score =  358 bits (918), Expect = 8e-97,   Method: Compositional matrix adjust.
 Identities = 171/333 (51%), Positives = 236/333 (70%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H KS+ +K   L + +++  ALR++  E+ G+++L  +L+  L+  F  AV+ I  I+GR
Sbjct: 2   HVKSLDKK--PLDRQASIASALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIG+K+A+TLASTGTP+FFVH  EA+HGDLGMI RDD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGAKIAATLASTGTPAFFVHPVEANHGDLGMIARDDAIIAISWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  I+ Y+RRFSIPLIAITS   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL IG
Sbjct: 120 MLGIVAYSRRFSIPLIAITSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG      S++M  GD IPL  +G  + +A+  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTLVSEIMRIGDQIPLASLGTKMPEAVMTL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S+K+ GCV +VD   +L GIIT+GD+ RN H++L  + V++VM + PK +   TL   A+
Sbjct: 240 SQKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAI 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            LL +HNI  L+V  +    +G+VHF DLLR G
Sbjct: 300 ALLNEHNIGALVVTKN-NMPLGVVHFHDLLRIG 331


>gi|225628553|ref|ZP_03786587.1| sugar isomerase, KpsF/GutQ family protein [Brucella ceti str. Cudo]
 gi|225616399|gb|EEH13447.1| sugar isomerase, KpsF/GutQ family protein [Brucella ceti str. Cudo]
          Length = 359

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 41  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 100

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 101 LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 160

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 161 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 220

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 221 SDFRTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 280

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 281 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 339

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 340 EANRPIGLVHFHDLLRIG 357


>gi|17988365|ref|NP_540998.1| polysialic acid capsule expression protein KPSF [Brucella
           melitensis bv. 1 str. 16M]
 gi|148557832|ref|YP_001257149.1| sugar isomerase KpsF/GutQ [Brucella ovis ATCC 25840]
 gi|237816595|ref|ZP_04595587.1| sugar isomerase, KpsF/GutQ family [Brucella abortus str. 2308 A]
 gi|297250024|ref|ZP_06933725.1| arabinose-5-phosphate isomerase [Brucella abortus bv. 5 str. B3196]
 gi|17984142|gb|AAL53262.1| polysialic acid capsule expression protein kpsf [Brucella
           melitensis bv. 1 str. 16M]
 gi|148369117|gb|ABQ61989.1| sugar isomerase, KpsF/GutQ [Brucella ovis ATCC 25840]
 gi|237787408|gb|EEP61624.1| sugar isomerase, KpsF/GutQ family [Brucella abortus str. 2308 A]
 gi|297173893|gb|EFH33257.1| arabinose-5-phosphate isomerase [Brucella abortus bv. 5 str. B3196]
          Length = 359

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 41  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 100

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 101 LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 160

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 161 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 220

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 221 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 280

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 281 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 339

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 340 EANRPIGLVHFHDLLRIG 357


>gi|254706367|ref|ZP_05168195.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis M163/99/10]
 gi|254711343|ref|ZP_05173154.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis B2/94]
 gi|256030028|ref|ZP_05443642.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis M292/94/1]
 gi|256158200|ref|ZP_05456109.1| sugar isomerase, KpsF/GutQ [Brucella ceti M490/95/1]
 gi|256252858|ref|ZP_05458394.1| sugar isomerase, KpsF/GutQ [Brucella ceti B1/94]
 gi|260166921|ref|ZP_05753732.1| sugar isomerase, KpsF/GutQ [Brucella sp. F5/99]
 gi|261219945|ref|ZP_05934226.1| KpsF/GutQ family protein [Brucella ceti B1/94]
 gi|261313813|ref|ZP_05953010.1| KpsF/GutQ family protein [Brucella pinnipedialis M163/99/10]
 gi|261318946|ref|ZP_05958143.1| KpsF/GutQ family protein [Brucella pinnipedialis B2/94]
 gi|261756306|ref|ZP_06000015.1| KpsF/GutQ family protein [Brucella sp. F5/99]
 gi|265987050|ref|ZP_06099607.1| KpsF/GutQ family protein [Brucella pinnipedialis M292/94/1]
 gi|265996712|ref|ZP_06109269.1| KpsF/GutQ family protein [Brucella ceti M490/95/1]
 gi|260918529|gb|EEX85182.1| KpsF/GutQ family protein [Brucella ceti B1/94]
 gi|261298169|gb|EEY01666.1| KpsF/GutQ family protein [Brucella pinnipedialis B2/94]
 gi|261302839|gb|EEY06336.1| KpsF/GutQ family protein [Brucella pinnipedialis M163/99/10]
 gi|261736290|gb|EEY24286.1| KpsF/GutQ family protein [Brucella sp. F5/99]
 gi|262551009|gb|EEZ07170.1| KpsF/GutQ family protein [Brucella ceti M490/95/1]
 gi|264659247|gb|EEZ29508.1| KpsF/GutQ family protein [Brucella pinnipedialis M292/94/1]
          Length = 333

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFRTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|23499840|ref|NP_699280.1| sugar isomerase KpsF/GutQ [Brucella suis 1330]
 gi|62317032|ref|YP_222885.1| sugar isomerase KpsF/GutQ [Brucella abortus bv. 1 str. 9-941]
 gi|83269026|ref|YP_418317.1| CBS domain-containing protein [Brucella melitensis biovar Abortus
           2308]
 gi|189022299|ref|YP_001932040.1| KpsF/GutQ family protein [Brucella abortus S19]
 gi|254691484|ref|ZP_05154738.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 6 str. 870]
 gi|254695220|ref|ZP_05157048.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 3 str. Tulya]
 gi|254698319|ref|ZP_05160147.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699389|ref|ZP_05161217.1| sugar isomerase, KpsF/GutQ [Brucella suis bv. 5 str. 513]
 gi|254702507|ref|ZP_05164335.1| sugar isomerase, KpsF/GutQ [Brucella suis bv. 3 str. 686]
 gi|254731762|ref|ZP_05190340.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 4 str. 292]
 gi|256014869|ref|YP_003104878.1| sugar isomerase, KpsF/GutQ [Brucella microti CCM 4915]
 gi|256042998|ref|ZP_05445944.1| sugar isomerase, KpsF/GutQ [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112018|ref|ZP_05452963.1| sugar isomerase, KpsF/GutQ [Brucella melitensis bv. 3 str. Ether]
 gi|256256669|ref|ZP_05462205.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 9 str. C68]
 gi|260544268|ref|ZP_05820089.1| KpsF/GutQ family protein [Brucella abortus NCTC 8038]
 gi|260564231|ref|ZP_05834716.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. 16M]
 gi|260757104|ref|ZP_05869452.1| KpsF/GutQ family protein [Brucella abortus bv. 6 str. 870]
 gi|260759526|ref|ZP_05871874.1| KpsF/GutQ family protein [Brucella abortus bv. 4 str. 292]
 gi|260762770|ref|ZP_05875102.1| KpsF/GutQ family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882913|ref|ZP_05894527.1| KpsF/GutQ family protein [Brucella abortus bv. 9 str. C68]
 gi|261215582|ref|ZP_05929863.1| KpsF/GutQ family protein [Brucella abortus bv. 3 str. Tulya]
 gi|261749838|ref|ZP_05993547.1| KpsF/GutQ family protein [Brucella suis bv. 5 str. 513]
 gi|261753080|ref|ZP_05996789.1| KpsF/GutQ family protein [Brucella suis bv. 3 str. 686]
 gi|265989435|ref|ZP_06101992.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993464|ref|ZP_06106021.1| KpsF/GutQ family protein [Brucella melitensis bv. 3 str. Ether]
 gi|23463410|gb|AAN33285.1| sugar isomerase, KpsF/GutQ [Brucella suis 1330]
 gi|62197225|gb|AAX75524.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 1 str. 9-941]
 gi|82939300|emb|CAJ12238.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Brucella melitensis biovar Abortus 2308]
 gi|189020873|gb|ACD73594.1| KpsF/GutQ family protein [Brucella abortus S19]
 gi|255997529|gb|ACU49216.1| sugar isomerase, KpsF/GutQ [Brucella microti CCM 4915]
 gi|260097539|gb|EEW81413.1| KpsF/GutQ family protein [Brucella abortus NCTC 8038]
 gi|260151874|gb|EEW86967.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. 16M]
 gi|260669844|gb|EEX56784.1| KpsF/GutQ family protein [Brucella abortus bv. 4 str. 292]
 gi|260673191|gb|EEX60012.1| KpsF/GutQ family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677212|gb|EEX64033.1| KpsF/GutQ family protein [Brucella abortus bv. 6 str. 870]
 gi|260872441|gb|EEX79510.1| KpsF/GutQ family protein [Brucella abortus bv. 9 str. C68]
 gi|260917189|gb|EEX84050.1| KpsF/GutQ family protein [Brucella abortus bv. 3 str. Tulya]
 gi|261739591|gb|EEY27517.1| KpsF/GutQ family protein [Brucella suis bv. 5 str. 513]
 gi|261742833|gb|EEY30759.1| KpsF/GutQ family protein [Brucella suis bv. 3 str. 686]
 gi|262764334|gb|EEZ10366.1| KpsF/GutQ family protein [Brucella melitensis bv. 3 str. Ether]
 gi|263000104|gb|EEZ12794.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. Rev.1]
          Length = 333

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|256059680|ref|ZP_05449875.1| sugar isomerase, KpsF/GutQ [Brucella neotomae 5K33]
 gi|261323651|ref|ZP_05962848.1| KpsF/GutQ family protein [Brucella neotomae 5K33]
 gi|261299631|gb|EEY03128.1| KpsF/GutQ family protein [Brucella neotomae 5K33]
          Length = 333

 Score =  357 bits (917), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGVSLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|49473832|ref|YP_031874.1| polysialic acid capsule expression protein [Bartonella quintana
           str. Toulouse]
 gi|49239335|emb|CAF25668.1| Polysialic acid capsule expression protein [Bartonella quintana
           str. Toulouse]
          Length = 331

 Score =  357 bits (916), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 176/319 (55%), Positives = 231/319 (72%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S V  AL+++ +EK+GL +LE++L G LS  F  AV+ IK   G VVITG+GKSGHIG+
Sbjct: 12  QSAVTSALKTLASEKQGLEALEAALLGNLSSSFEVAVQTIKNANGHVVITGLGKSGHIGT 71

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ +A RF  P
Sbjct: 72  KIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETLELSGIINHAARFRTP 131

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+TS   SV+A  ADIVL LPK  E+CPHGLAPTTS ++QLA+GDALA+ALLE R F+
Sbjct: 132 LIAMTSGEHSVLARQADIVLLLPKIEEACPHGLAPTTSTVVQLAMGDALAVALLEMRGFT 191

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF + HPGG LG       D+MH GDSIPLV  G  + +A+ +L  K FGCV VV++ 
Sbjct: 192 ATDFKIYHPGGSLGAHLKYVRDIMHVGDSIPLVVQGTTMTEAMNVLVAKHFGCVGVVNQR 251

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GD+ RN H +L+  +V++VM K+PK++  +TL+  A   +  H+I    VV
Sbjct: 252 GELIGIVTDGDLARNIHFNLSKFNVDEVMTKDPKIVEPNTLVGAATAFINDHHIGAFFVV 311

Query: 321 DDCQKAIGIVHFLDLLRFG 339
           +D +K +GIVHF DLLR G
Sbjct: 312 ED-KKPLGIVHFHDLLRIG 329


>gi|161620163|ref|YP_001594049.1| KpsF/GutQ family sugar isomerase [Brucella canis ATCC 23365]
 gi|260568587|ref|ZP_05839056.1| KpsF/GutQ family protein [Brucella suis bv. 4 str. 40]
 gi|161336974|gb|ABX63278.1| sugar isomerase, KpsF/GutQ family [Brucella canis ATCC 23365]
 gi|260155252|gb|EEW90333.1| KpsF/GutQ family protein [Brucella suis bv. 4 str. 40]
          Length = 333

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 233/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
              + IG+VHF DLLR G
Sbjct: 314 KANRPIGLVHFHDLLRIG 331


>gi|319899252|ref|YP_004159345.1| sugar isomerase [Bartonella clarridgeiae 73]
 gi|319403216|emb|CBI76775.1| sugar isomerase [Bartonella clarridgeiae 73]
          Length = 331

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 175/325 (53%), Positives = 226/325 (69%), Gaps = 1/325 (0%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+L   + V  AL++I  EKRGL  LE +   +L+  F  AV+ I    G VVITG+GKS
Sbjct: 7   HTLTLQNAVILALKTISVEKRGLEVLEKAFHEKLADSFRAAVQTISNANGHVVITGLGKS 66

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ +A 
Sbjct: 67  GHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSDDVILALSWSGETTELSGIISHAA 126

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL +GD+LAIALLE
Sbjct: 127 RFRIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTTSTTMQLVLGDSLAIALLE 186

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+  DF + HPGG LG       D+MH GD +PLV  G  + +A+ IL +K FGCV 
Sbjct: 187 MRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVAQGISMTEAMEILVKKHFGCVG 246

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V++   +L GI+T+GD+ RN HKDL+   V++VM KNPK +  DTL+  A   +  H+I 
Sbjct: 247 VINPRGELIGIVTDGDLARNIHKDLSQFDVDEVMTKNPKTVSPDTLVGAATAFINDHHIG 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              V+++ +K IGIVHF DLLR G+
Sbjct: 307 AFFVIEN-KKPIGIVHFHDLLRIGV 330


>gi|163844272|ref|YP_001621927.1| KpsF/GutQ family sugar isomerase [Brucella suis ATCC 23445]
 gi|163674995|gb|ABY39105.1| sugar isomerase, KpsF/GutQ family [Brucella suis ATCC 23445]
          Length = 333

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 169/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   + +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDTALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|225685940|ref|YP_002733912.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis ATCC
           23457]
 gi|256261847|ref|ZP_05464379.1| KpsF/GutQ family protein [Brucella melitensis bv. 2 str. 63/9]
 gi|225642045|gb|ACO01958.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis ATCC
           23457]
 gi|263091323|gb|EEZ15859.1| KpsF/GutQ family protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326410260|gb|ADZ67324.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis M28]
 gi|326553553|gb|ADZ88192.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis
           M5-90]
          Length = 333

 Score =  356 bits (914), Expect = 2e-96,   Method: Compositional matrix adjust.
 Identities = 170/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKIENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|114705437|ref|ZP_01438345.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Fulvimarina pelagi HTCC2506]
 gi|114540222|gb|EAU43342.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Fulvimarina pelagi HTCC2506]
          Length = 334

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 170/320 (53%), Positives = 227/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  ALR+I  E  GL +L  SL G+ +  F   + +I  ++GR+V+TG+GKSGHIG+
Sbjct: 15  STAILSALRTIATEAEGLKALSESLVGDRANAFERTIARILEMRGRIVVTGVGKSGHIGT 74

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEA+HGDLGMI +DD+I+ LSWSG + ELK IL Y+RRF I 
Sbjct: 75  KMAATFASTGTPAFFVHAAEANHGDLGMIGQDDIILALSWSGETSELKGILDYSRRFGIT 134

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+TS+  S +   AD +L LP+  E+CPHGLAPTTS  +Q+A+GDALA+ALLE R F+
Sbjct: 135 LIAMTSKPDSALGRSADEILQLPQATEACPHGLAPTTSTALQMALGDALAVALLEQRRFT 194

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF + HPGGKLG   V   DVMHSGD +PLV     + +AI ++S K FGCVA+ DE 
Sbjct: 195 PQDFRIYHPGGKLGASLVKVGDVMHSGDEMPLVTSNTLMSEAILVMSRKSFGCVAITDEA 254

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ R+   DL   +V+DVM +NPK +  DTL   A++ +   NI+ LMVV
Sbjct: 255 GRLSGIITDGDLRRHISSDLLAKTVDDVMTRNPKTVEPDTLAMAALETINASNITSLMVV 314

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            + Q  +GIVH  DLLR G+
Sbjct: 315 REAQP-VGIVHLHDLLRIGV 333


>gi|316932423|ref|YP_004107405.1| KpsF/GutQ family protein [Rhodopseudomonas palustris DX-1]
 gi|315600137|gb|ADU42672.1| KpsF/GutQ family protein [Rhodopseudomonas palustris DX-1]
          Length = 337

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 169/330 (51%), Positives = 236/330 (71%), Gaps = 1/330 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T    S    + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I+  KGR++IT
Sbjct: 8   ITTHAMSEQAAAAIPSALRTLEAEASGVTALATALQADLGVRFAATIDLIQNAKGRLIIT 67

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ LSWSG   E+K +
Sbjct: 68  GLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILALSWSGEQPEMKNL 127

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + YA+RF I L+A+TS+  S +A  AD+ LTLPK  E+CPH LAPTTS++M LA+GDALA
Sbjct: 128 INYAKRFKIALVAMTSDPTSTLATAADVSLTLPKAREACPHNLAPTTSSLMMLALGDALA 187

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLESR FS  DF VLHPGGKLG +   A D+MH+G+++PL  +G  + DA+  +S K 
Sbjct: 188 IALLESRGFSPRDFSVLHPGGKLGAMLKYARDLMHTGEAVPLKPLGTRMSDALVEMSAKG 247

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV ++D   ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + L   A++LL 
Sbjct: 248 FGCVGIIDANGQIAGIVTDGDLRRNMRPDLMTATVDEVMTRNPKTISPNLLAGQALELLN 307

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I+ L+V +  +K +GIVH  DLLR G+
Sbjct: 308 SSKITALLVAEG-KKPLGIVHLHDLLRAGV 336


>gi|39933956|ref|NP_946232.1| CBS/sugar isomerase domain containing protein [Rhodopseudomonas
           palustris CGA009]
 gi|39647803|emb|CAE26323.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Rhodopseudomonas palustris CGA009]
          Length = 337

 Score =  356 bits (913), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 171/340 (50%), Positives = 241/340 (70%), Gaps = 4/340 (1%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +H K+ T    S    + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I
Sbjct: 1   MALSKNHTKTPTM---SEQAAAAIPSALRTLEAEASGVTALATALQSDLGVRFAATIDLI 57

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +  KGR++ITG+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SW
Sbjct: 58  QNAKGRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSW 117

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG   E+K ++ YA+RF I L+A+TS++ S +A  AD+ LTLPK  E+CPH LAPTTS++
Sbjct: 118 SGEQPEMKNLINYAKRFKIALVAMTSDSTSTLATAADVSLTLPKAREACPHNLAPTTSSL 177

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           M LA+GDALAIALLESR F+  DF VLHPGGKLG +   A D+MH+G++IPL  +G  + 
Sbjct: 178 MMLALGDALAIALLESRGFTPGDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTRMS 237

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+  +S K FGCV ++D   ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + 
Sbjct: 238 DALVEMSAKGFGCVGIIDSNGQIAGIVTDGDLRRNMRSDLMTATVDEVMTRNPKTISPNL 297

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L   A++LL    I+ L+V +  +K +GIVH  DLLR G+
Sbjct: 298 LAGQALELLNSSKITALLVAEG-KKPLGIVHLHDLLRAGV 336


>gi|254720676|ref|ZP_05182487.1| sugar isomerase, KpsF/GutQ [Brucella sp. 83/13]
 gi|265985726|ref|ZP_06098461.1| KpsF/GutQ family protein [Brucella sp. 83/13]
 gi|306839373|ref|ZP_07472189.1| sugar isomerase, KpsF/GutQ family [Brucella sp. NF 2653]
 gi|264664318|gb|EEZ34579.1| KpsF/GutQ family protein [Brucella sp. 83/13]
 gi|306405621|gb|EFM61884.1| sugar isomerase, KpsF/GutQ family [Brucella sp. NF 2653]
          Length = 333

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 169/318 (53%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLV  G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVTTGTPMPDAMKVLAQKSFGCVIVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN +++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLNRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|319407601|emb|CBI81251.1| sugar isomerase [Bartonella sp. 1-1C]
          Length = 331

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 175/328 (53%), Positives = 227/328 (69%), Gaps = 1/328 (0%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           +  H+L   + +  AL++I  EKRGL +LE + Q  L+  F  AV+ I    G VVITG+
Sbjct: 4   QSSHTLNLQNAIILALKTISIEKRGLKALEKAFQENLAASFKAAVQAISNANGHVVITGL 63

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI   D+I+ LSWSG + EL  I+ 
Sbjct: 64  GKSGHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSGDVILALSWSGETTELSGIIS 123

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +A RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL IGDALAIA
Sbjct: 124 HAARFHIPLIAITSGEHSILGQQADIVLLLPKVEEACPHGLAPTTSTTMQLVIGDALAIA 183

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           LLE R F+  DF + HPGG LG       D+MH G+ +PLV  G  + +A+ +L +K FG
Sbjct: 184 LLEMRGFTATDFKIYHPGGSLGANLKYVRDIMHQGNRLPLVTQGVSMTEAMEVLVKKHFG 243

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           CV VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   +  H
Sbjct: 244 CVGVVNPRGELIGIITDGDLVRNIHNDLSQFNVDEVMTKNPKTVGPDTLVGAATAFINDH 303

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +I    V+++ +K IGIVHF DLLR G+
Sbjct: 304 HIGAFFVIEN-KKPIGIVHFHDLLRIGV 330


>gi|294853100|ref|ZP_06793772.1| arabinose-5-phosphate isomerase [Brucella sp. NVSL 07-0026]
 gi|294818755|gb|EFG35755.1| arabinose-5-phosphate isomerase [Brucella sp. NVSL 07-0026]
          Length = 333

 Score =  355 bits (912), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 169/318 (53%), Positives = 233/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F   VE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEVVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|306845306|ref|ZP_07477881.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO1]
 gi|306274222|gb|EFM56034.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO1]
          Length = 333

 Score =  355 bits (911), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 169/318 (53%), Positives = 233/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLV  G P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVTTGTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|192289375|ref|YP_001989980.1| KpsF/GutQ family protein [Rhodopseudomonas palustris TIE-1]
 gi|192283124|gb|ACE99504.1| KpsF/GutQ family protein [Rhodopseudomonas palustris TIE-1]
          Length = 337

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 166/319 (52%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I+  KGR++ITG+GKSGHIG K
Sbjct: 19  AAIPSALRTLEAEASGVTALATALQSDLGVRFAATIDLIQNAKGRLIITGLGKSGHIGRK 78

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SWSG   E+K ++ YA+RF I L
Sbjct: 79  IAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLINYAKRFKIAL 138

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+TS+  S +A  AD+ LTLPK  E+CPH LAPTTS++M LA+GDALAIALLESR F+ 
Sbjct: 139 VAMTSDPTSTLATAADVSLTLPKAREACPHNLAPTTSSLMMLALGDALAIALLESRGFTP 198

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF VLHPGGKLG +   A D+MH+G++IPL  +G  + DA+  +S K FGCV ++D   
Sbjct: 199 GDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTRMSDALVEMSAKGFGCVGIIDSNG 258

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + L   A++LL    I+ L+V +
Sbjct: 259 QIAGIVTDGDLRRNMRSDLMTATVDEVMTRNPKTISPNLLAGQALELLNSSKITALLVAE 318

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             +K +GIVH  DLLR G+
Sbjct: 319 G-KKPLGIVHLHDLLRAGV 336


>gi|254711942|ref|ZP_05173753.1| sugar isomerase, KpsF/GutQ [Brucella ceti M644/93/1]
 gi|254715012|ref|ZP_05176823.1| sugar isomerase, KpsF/GutQ [Brucella ceti M13/05/1]
 gi|261216715|ref|ZP_05930996.1| KpsF/GutQ family protein [Brucella ceti M13/05/1]
 gi|261319582|ref|ZP_05958779.1| KpsF/GutQ family protein [Brucella ceti M644/93/1]
 gi|260921804|gb|EEX88372.1| KpsF/GutQ family protein [Brucella ceti M13/05/1]
 gi|261292272|gb|EEX95768.1| KpsF/GutQ family protein [Brucella ceti M644/93/1]
          Length = 333

 Score =  354 bits (909), Expect = 9e-96,   Method: Compositional matrix adjust.
 Identities = 169/318 (53%), Positives = 233/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGSK
Sbjct: 15  AAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGSK 74

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 75  LAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIPL 134

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 135 IAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 194

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLVK   P+ DA+ +L++K FGCV V D+  
Sbjct: 195 SDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTDTPMPDAMKVLAQKSFGCVVVTDDAG 254

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV 
Sbjct: 255 ELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV- 313

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 314 EANRPIGLVHFHDLLRIG 331


>gi|13472656|ref|NP_104223.1| hypothetical protein mll3023 [Mesorhizobium loti MAFF303099]
 gi|14023403|dbj|BAB50009.1| mll3023 [Mesorhizobium loti MAFF303099]
          Length = 333

 Score =  353 bits (907), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 168/333 (50%), Positives = 236/333 (70%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H +S+ +K   L + +++  ALR++  E+ G+++L  +L+  L+  F  AV+ I  I+GR
Sbjct: 2   HARSLDKK--PLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIGSK+A+TLASTGTP+FFVH  EA+HGDLGMI +DD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGSKIAATLASTGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  I+ Y+RRFSIPLIA+TS   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL IG
Sbjct: 120 MLGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG      S++M  GD +PL  +G  + +A+  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S+K+ GCV +VD   +L GIIT+GD+ RN H++L  + V++VM + PK +   TL   A+
Sbjct: 240 SQKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAI 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            LL +HNI  L+V  +    +G+VHF DLLR G
Sbjct: 300 ALLNEHNIGALVVTRN-NMPLGVVHFHDLLRIG 331


>gi|319406114|emb|CBI79744.1| sugar isomerase [Bartonella sp. AR 15-3]
          Length = 331

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 175/325 (53%), Positives = 224/325 (68%), Gaps = 1/325 (0%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+L   + V  AL++I  EKRGL +LE +   +L+  F  AV+ I    G VVITG+GKS
Sbjct: 7   HTLNLQNAVILALKTISIEKRGLEALEKAFHEKLADSFKAAVQAISNANGHVVITGLGKS 66

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+++ LSWSG + EL  I+ +  
Sbjct: 67  GHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSDDVVLALSWSGETTELSGIISHTA 126

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPT S  MQL IGDALAIALLE
Sbjct: 127 RFHIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTASTTMQLVIGDALAIALLE 186

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+  DF + HPGG LG       D+MH GD +PLV  G  +  A+ IL +K FGCV 
Sbjct: 187 MRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVMQGASMTAAMEILVKKHFGCVG 246

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   +  H+I 
Sbjct: 247 VVNSRGELIGIITDGDLARNIHNDLSQFNVDEVMTKNPKTVGPDTLVGTATAFINDHHIG 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              V+++ +K IGIVHF DLLR G+
Sbjct: 307 AFFVIEN-KKPIGIVHFHDLLRIGV 330


>gi|92118874|ref|YP_578603.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14]
 gi|91801768|gb|ABE64143.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14]
          Length = 325

 Score =  352 bits (903), Expect = 5e-95,   Method: Compositional matrix adjust.
 Identities = 171/320 (53%), Positives = 228/320 (71%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ ++ ALR+  AE  G+++L +SL+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NAAIESALRTFEAEAGGVTALAASLKSDLGPAFAAAADMIRKAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF I 
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIA 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+VL  P+  E+CPH LAPTTS++MQLA+GDALAIALLE R F+
Sbjct: 126 LIAMTAERDSTLGKAADVVLVQPRAREACPHNLAPTTSSLMQLALGDALAIALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF VLHPGGKLG L     D+MHSGD+IPL  +G  + DA+  ++ K FGCV V+D  
Sbjct: 186 SVDFSVLHPGGKLGALLKYTRDLMHSGDAIPLRPLGTKMSDALVEMTSKGFGCVGVIDGH 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GD+ R+   DL T+ V+DVM KNPK I  D L    +++L    I+ L +V
Sbjct: 246 GHLVGIVTDGDLRRHMRPDLMTVRVDDVMTKNPKTIGRDLLAGEVLEILNSSKITAL-IV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            D +K +GIVH  DLLR G+
Sbjct: 305 TDGKKPVGIVHLHDLLRAGV 324


>gi|300024165|ref|YP_003756776.1| KpsF/GutQ family protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525986|gb|ADJ24455.1| KpsF/GutQ family protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 343

 Score =  351 bits (901), Expect = 8e-95,   Method: Compositional matrix adjust.
 Identities = 166/320 (51%), Positives = 230/320 (71%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            ++V  A+R++  E  GL  L S L G+L+  F  A+ ++ A+KGRV++TGIGKSGH+G 
Sbjct: 24  KASVASAVRTLNLESEGLVQLASELNGDLAGPFEEAMRRLVAVKGRVIVTGIGKSGHVGQ 83

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVH +EASHGDLGM+TR DLI+ LSWSG + ELK I+ Y+RRF++P
Sbjct: 84  KIAATFASTGTPAFFVHPSEASHGDLGMVTRSDLILALSWSGETVELKPIITYSRRFAVP 143

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS+ KS +   AD+VL LP+  E+CPHGLAPTTS  MQLA+GD+LAIALLE+R F+
Sbjct: 144 LIAITSQAKSALGEQADVVLLLPRTKEACPHGLAPTTSTTMQLALGDSLAIALLEARGFT 203

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF + HPGG LG      SD+MH G+ +PL+K G  + +A+  ++EK FGCV VV++ 
Sbjct: 204 AHDFKIFHPGGSLGANLKYVSDIMHKGERLPLIKSGETMANALVTMTEKSFGCVGVVEKR 263

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+IT+GD+ R+   DL   SV+ +M   PK I    L + A++L+   +I+ L VV
Sbjct: 264 GRLIGVITDGDLRRHMGADLVRASVDQIMTAKPKTISPTMLASAALELINASSITALFVV 323

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +  QK +G+VH  DLLR G+
Sbjct: 324 EK-QKPVGLVHIHDLLRLGV 342


>gi|299132165|ref|ZP_07025360.1| KpsF/GutQ family protein [Afipia sp. 1NLS2]
 gi|298592302|gb|EFI52502.1| KpsF/GutQ family protein [Afipia sp. 1NLS2]
          Length = 336

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 169/317 (53%), Positives = 231/317 (72%), Gaps = 1/317 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ ALR++ AE  G+++L ++LQ  L   F  A + I+  KGRV++TG+GKSGHIG K+A
Sbjct: 20  IESALRTLAAEADGVAALIATLQNGLGAPFAAATDLIRNAKGRVIVTGLGKSGHIGRKIA 79

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVHAAEASHGDLGMIT DD+II LSWSG + EL++++ Y+RRF I LIA
Sbjct: 80  ATLASTGTPAFFVHAAEASHGDLGMITPDDVIIALSWSGETAELRSLINYSRRFRIQLIA 139

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TSE++S +   AD+VL LPK  E+CP+ LAPTTSA+MQLAIGDALAIALLESR FS  D
Sbjct: 140 VTSESESTLGAAADVVLALPKAREACPNNLAPTTSALMQLAIGDALAIALLESRGFSATD 199

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F VLHP GKLG +     D+MH  +S+P+  +G P+ +A+  ++ K FGCVA+VD   ++
Sbjct: 200 FSVLHPSGKLGAMLKFVRDLMHKDESVPMKPLGTPMSEALFEMTSKGFGCVAIVDGRGEI 259

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ R+   DL T +V+ VM  NPK I  D L + A+++L    I+ L +V   
Sbjct: 260 AGIVTDGDLRRHMRPDLMTATVDQVMTANPKTISGDLLASEALEILNASKITAL-IVTKG 318

Query: 324 QKAIGIVHFLDLLRFGI 340
           +  +GI+H  DLLR G+
Sbjct: 319 KTPVGILHLHDLLRAGV 335


>gi|319781610|ref|YP_004141086.1| KpsF/GutQ family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167498|gb|ADV11036.1| KpsF/GutQ family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 333

 Score =  349 bits (896), Expect = 3e-94,   Method: Compositional matrix adjust.
 Identities = 172/333 (51%), Positives = 232/333 (69%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H  S+ +K   L + +++  ALR++  E+ G+ +L  +L+  L+  F  AVE I  I+GR
Sbjct: 2   HAGSLDKK--PLDRQASIASALRTVATEQAGVEALAEALENGLAAPFAQAVEMISGIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIGSK+A+TLASTGTP+FFVH AEA+HGDLGMI RDD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGSKIAATLASTGTPAFFVHPAEANHGDLGMIARDDAIIAMSWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  I+ Y+RRFSIPLIA+T+   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL +G
Sbjct: 120 LMGIVAYSRRFSIPLIAVTAGETSALARAADVVLLLPRAPEACPHGLAPTTSTLLQLVMG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG       ++MH GD +PLV  G  + DAI  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTQIREIMHVGDRLPLVVAGTGMQDAILEL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S K FGCVA+ D    L GIIT+GDI R+   +L  ++V+ VM + PK    DTL+  A+
Sbjct: 240 SRKGFGCVAITDVDGALVGIITDGDIRRHIGSNLLAMTVDQVMTRGPKTATPDTLVATAL 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           Q +    I+ LMVV+  +K +G++H  DLLR G
Sbjct: 300 QTINNSAITSLMVVEG-RKPVGLIHLHDLLRIG 331


>gi|91975344|ref|YP_568003.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5]
 gi|91681800|gb|ABE38102.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 169/319 (52%), Positives = 229/319 (71%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR++ AE  G+++L ++LQ +L   F  A+E I+  KGR++ITG+GKSGHIG K
Sbjct: 18  AAIPSALRTLEAEADGVTALAAALQSDLGGAFVAAIEMIRNAKGRLIITGLGKSGHIGRK 77

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SWSG   E+K ++ YA RF I L
Sbjct: 78  IAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLITYASRFKIAL 137

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS+N S +A  ADI LTLPK  E+CPH LAPTTS++M LA+GDA+AIALLESR F+ 
Sbjct: 138 IAMTSDNGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLALGDAIAIALLESRGFTS 197

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF VLHPGGKLG +   A D+MH+G++IPL  +G  + DA+  +S K FGCV +VD   
Sbjct: 198 TDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTKMSDALVEMSAKGFGCVGIVDANG 257

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           ++ GI+T+GD+ R+   DL T  V++VM K PK I    L    ++LL    I+ L+V +
Sbjct: 258 QIAGIVTDGDLRRHMRPDLMTAIVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTE 317

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             +K +GIVH  DLLR G+
Sbjct: 318 G-KKPVGIVHLHDLLRAGV 335


>gi|222149732|ref|YP_002550689.1| capsule expression protein [Agrobacterium vitis S4]
 gi|221736714|gb|ACM37677.1| capsule expression protein [Agrobacterium vitis S4]
          Length = 331

 Score =  349 bits (895), Expect = 4e-94,   Method: Compositional matrix adjust.
 Identities = 177/323 (54%), Positives = 233/323 (72%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++ S ++ ALR +  E+ GL++LE +L G L+  F  A++ I    GRV+++G+GKSGH
Sbjct: 8   LVEASAIKAALRVVATEQSGLAALEEALAGYLAGPFCNAIDVIGKSSGRVIVSGVGKSGH 67

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FF+H AEA+HGDLGMI RDD++I LSW G S EL  IL + RRF
Sbjct: 68  IGGKIAATFASTGTPAFFIHPAEANHGDLGMIARDDVVIALSWGGESTELNGILSFTRRF 127

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           SIPLIAIT+  +S +A  ADIVL +PK  E+CPHGLAPTTS +MQ+A+GDALA+ALLE+R
Sbjct: 128 SIPLIAITAGEQSTLAREADIVLLMPKVQEACPHGLAPTTSTMMQMALGDALALALLEAR 187

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F  NDF   HPGGKLG +     D+MH G+ +PLV  G  + +AI +LS+KRFGCV V 
Sbjct: 188 GFGPNDFKTFHPGGKLGAMLTHVGDMMHIGEDVPLVPEGTSVPEAIIMLSQKRFGCVGVT 247

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           D   +L GIIT+GDI RN +++L    VE+VM ++PK +  +TL T AM +L QHNIS L
Sbjct: 248 DSANRLVGIITDGDIARNLNRNLGERMVEEVMTRHPKTVHTETLATTAMAILNQHNISAL 307

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            V D+     GI+HF DLLR G+
Sbjct: 308 FVTDEDGVPNGIIHFHDLLRIGV 330


>gi|85715895|ref|ZP_01046873.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter sp. Nb-311A]
 gi|85697302|gb|EAQ35182.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter sp. Nb-311A]
          Length = 325

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 166/320 (51%), Positives = 226/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ ++ ALR+  AE  G+S+L ++L+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NAAIESALRTFEAEAGGVSALAAALKSDLGSAFAVATDLIRNAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF IP
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITPDDVIMALSWSGEQPEMKNLITYAKRFRIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+VLTLPK  E+CPH LAPTTS +M LA+GDALA+ALLE R F+
Sbjct: 126 LIAMTAERDSTLGSAADLVLTLPKAREACPHNLAPTTSTLMLLALGDALAVALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF +LHPGGKLG +     D+MH GD++P+  +G  +  AI  ++ K FGCVA+VD+ 
Sbjct: 186 STDFSMLHPGGKLGAMLKQTRDIMHKGDALPVALLGTLMSQAIAEMTAKTFGCVAIVDDN 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GIIT+GD+ R    DL +L VEDVM + P  +  D L+   + LL     + L+V 
Sbjct: 246 GTLAGIITDGDLRRRMSPDLLSLKVEDVMTRTPITVRPDQLVGEVLDLLNTTKKTQLLVA 305

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  K +G++HF DLLR G+
Sbjct: 306 DN-NKLVGVIHFHDLLRAGV 324


>gi|86751637|ref|YP_488133.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2]
 gi|86574665|gb|ABD09222.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2]
          Length = 336

 Score =  348 bits (894), Expect = 5e-94,   Method: Compositional matrix adjust.
 Identities = 167/319 (52%), Positives = 229/319 (71%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  ALR++ AE  G+++L ++L+ +L   F  A+E I+  KGR++ITG+GKSGHIG K
Sbjct: 18  AAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLIITGLGKSGHIGRK 77

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SWSG   E+K ++ YA+RF I L
Sbjct: 78  IAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMKNLISYAKRFRIAL 137

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS++ S +A  ADI LTLPK  E+CPH LAPTTS++M LA+GDA+AIALLESR F+ 
Sbjct: 138 IAMTSDSGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLALGDAIAIALLESRGFTS 197

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF VLHPGGKLG +   A D+MH+GD++PL  +G  + DA+  +S K FGCV +VD   
Sbjct: 198 TDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALVEMSAKGFGCVGIVDASG 257

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            + GI+T+GD+ R+   DL T +V++VM K PK I    L    ++LL    I+ L+V +
Sbjct: 258 AVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLELLNSSKITALLVTE 317

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              K +GIVH  DLLR G+
Sbjct: 318 G-NKPVGIVHLHDLLRAGV 335


>gi|153011584|ref|YP_001372798.1| KpsF/GutQ family protein [Ochrobactrum anthropi ATCC 49188]
 gi|151563472|gb|ABS16969.1| KpsF/GutQ family protein [Ochrobactrum anthropi ATCC 49188]
          Length = 354

 Score =  346 bits (888), Expect = 3e-93,   Method: Compositional matrix adjust.
 Identities = 175/318 (55%), Positives = 234/318 (73%), Gaps = 1/318 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T+  ALR+I  E  GL++LE +L   LS  F  AV++I A +GR+V+TG+GKSGHIGSK
Sbjct: 36  ATIASALRTIKTENAGLAALEEALNDGLSGPFVEAVKRIVASRGRLVVTGVGKSGHIGSK 95

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGT +FFVH+AEA+HGDLGMI RDD+I+ +SWSG + ELK I+ Y++RF IPL
Sbjct: 96  LAATFASTGTSAFFVHSAEANHGDLGMIDRDDVILAISWSGETAELKGIVNYSQRFRIPL 155

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ 
Sbjct: 156 IAITSREDSALGRAADVVLLLPKTAEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTP 215

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +   D+MH G+ +PLV++G  L DA+ +L++K FGCV VVD G 
Sbjct: 216 SDFKTFHPGGSLGASLIHIRDIMHRGERLPLVEVGTSLPDAMKVLAQKSFGCVVVVDGGG 275

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L GI+T+GDI RN  ++L  L+V+DVM + PK + ++ L T A+  + +++I  L +V 
Sbjct: 276 DLAGIVTDGDISRNLSRNLAALAVDDVMTRKPKTVDQNMLATAALNTINENHIGAL-IVT 334

Query: 322 DCQKAIGIVHFLDLLRFG 339
           +  + IG+VHF DLLR G
Sbjct: 335 EAGRPIGLVHFHDLLRIG 352


>gi|75675124|ref|YP_317545.1| sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74419994|gb|ABA04193.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi
           Nb-255]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 168/320 (52%), Positives = 224/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  ++ ALR+  AE  G+S+L ++L+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NIAIESALRTFEAEAGGVSALAAALKSDLGLAFAAATDLIRNAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF IP
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+ L  PK  E+CPH LAPTTS++MQLA+GD LAIALLE R F+
Sbjct: 126 LIAMTAERDSTLGKAADVALVQPKAREACPHNLAPTTSSLMQLALGDGLAIALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF VLHPGGKLG L     D+MHSGD+IPL  +G  + +A+  ++ K FGCV V D  
Sbjct: 186 SVDFSVLHPGGKLGALLKYTRDLMHSGDAIPLKPLGTKMSEALVEMTSKGFGCVGVTDGQ 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GD+ R+   DL T  V+DVM  +PK I  D L   A+++L    I+ L +V
Sbjct: 246 GNLVGIVTDGDLRRHMRPDLMTARVDDVMTPHPKTIGRDLLAGEALEILNSSKITAL-IV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            + +K +GIVH  DLLR G+
Sbjct: 305 TEGKKPVGIVHLHDLLRAGV 324


>gi|209884073|ref|YP_002287930.1| arabinose 5-phosphate isomerase [Oligotropha carboxidovorans OM5]
 gi|209872269|gb|ACI92065.1| arabinose 5-phosphate isomerase [Oligotropha carboxidovorans OM5]
          Length = 336

 Score =  341 bits (875), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 167/331 (50%), Positives = 231/331 (69%), Gaps = 1/331 (0%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S T   H+   +  V  ALR++ +E  G+++L ++L+  L   F  A+  I+  KGRV++
Sbjct: 6   SQTAPDHAAPLSPAVDSALRTLASEADGVAALATALRTTLRPAFDDAIALIQNAKGRVIV 65

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GKSGHIG K+A+T ASTGTPSFFVHAAEASHGDLGMIT DD+I+ LSWSG + EL+ 
Sbjct: 66  TGLGKSGHIGRKIAATFASTGTPSFFVHAAEASHGDLGMITADDVIMALSWSGETAELRN 125

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ Y+RRF I LIA+TS+  S +   AD+VL LPK PE+CP+ LAPTTS++MQLA+GDA+
Sbjct: 126 LITYSRRFRIQLIALTSDPASTLGKAADVVLALPKAPEACPNNLAPTTSSLMQLALGDAI 185

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           AIALLE R F+  DF VLHP GKLG +     D+MH   SIP+  +G P+ DA+  ++ K
Sbjct: 186 AIALLEGRGFTAIDFSVLHPSGKLGAMLKFVRDLMHESASIPVKPLGTPMSDALVEMTSK 245

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            FGCVA++D   ++ GI+T+GD+ R+   DL T  V+DVM +NPK I  D L + A+++L
Sbjct: 246 GFGCVAIIDGRGEIAGIVTDGDLRRHMRPDLMTARVDDVMTRNPKTISPDLLASEALEIL 305

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               I+ L +V   +  +GIVH  D+LR G+
Sbjct: 306 NSSKITAL-IVTRGKTPVGIVHLHDILRAGV 335


>gi|218682550|ref|ZP_03530151.1| putative arabinose 5-phosphate isomerase [Rhizobium etli CIAT 894]
          Length = 306

 Score =  341 bits (874), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 158/286 (55%), Positives = 216/286 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++  +L++N  ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNKRAVNLVENGVLESAKRTIETERRGLEALEQAFDDGLAGPFTRAVETIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y RRFSIPLIAIT  ++S +A  ADI+L +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISYTRRFSIPLIAITCSDRSSLASAADIILLVPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +A+T+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTPMPEAVTVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           FGCV V+D   +L GI+TEGD+ RN  ++L  L+V+D+M K PK +
Sbjct: 241 FGCVGVLDADGRLCGIVTEGDMARNLSRNLAELAVDDIMTKTPKTV 286


>gi|307944457|ref|ZP_07659797.1| arabinose 5-phosphate isomerase [Roseibium sp. TrichSKD4]
 gi|307772206|gb|EFO31427.1| arabinose 5-phosphate isomerase [Roseibium sp. TrichSKD4]
          Length = 337

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 165/321 (51%), Positives = 224/321 (69%), Gaps = 1/321 (0%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++ ++  A R++  E  GLS+L ++L+  L+  F   V  IK  KGRVV++GIGKSGHI
Sbjct: 16  LQSRSLVSAERTLETEIAGLSALRAALKDSLAKPFADTVRLIKESKGRVVVSGIGKSGHI 75

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+KLA++LASTGTP+FFVHA+EASHGDLGMI  +D++I LSWSG + EL  I+ YARRF 
Sbjct: 76  GTKLAASLASTGTPAFFVHASEASHGDLGMIMENDVVIALSWSGETQELAGIVAYARRFK 135

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PL+A+TS   S +   AD+VL LPK  E+CPHGLAPTTSA+ QLA+GDALA+ALLESR+
Sbjct: 136 VPLVAVTSRLDSTLGRAADVVLNLPKVTEACPHGLAPTTSALAQLAMGDALAVALLESRD 195

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF V HPGGKLG     A D+MH G+++PLV    P+ + I ++++K FG + V D
Sbjct: 196 FSAQDFRVFHPGGKLGASLTNARDIMHKGETLPLVNSSTPMREGIVLMTQKGFGALGVTD 255

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E   L GIIT+GD+ R+   D   L   ++M   PK I  D +    ++LL   +I+ + 
Sbjct: 256 ETGNLVGIITDGDLRRHISSDFLDLPASEIMTAGPKTIRSDMMAAAILELLNSSSITSVF 315

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VV++ QK +GIVH  DLLR G
Sbjct: 316 VVEE-QKPVGIVHLHDLLRIG 335


>gi|115522722|ref|YP_779633.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisA53]
 gi|115516669|gb|ABJ04653.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisA53]
          Length = 337

 Score =  339 bits (869), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 161/320 (50%), Positives = 226/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +  ALR++ AE  G+++L ++L+ +L+  F  AV+ I   KGR+++TG+GKSGHIG 
Sbjct: 18  NDAIPSALRTLEAEAEGVTALAAALKSDLAGAFLAAVDTIAKAKGRLIVTGLGKSGHIGR 77

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT +D+I+ LSWSG   E+K ++ YA+RF IP
Sbjct: 78  KIAATFASTGTPAFFVHAAEASHGDLGMITGEDVILALSWSGEQPEMKNLITYAKRFRIP 137

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T++  S +   A + L LPK  E+CPH LAPTTS++M LA+GDALAIALLE R F+
Sbjct: 138 LIAMTADANSTLGQAAAVSLALPKAREACPHNLAPTTSSVMLLALGDALAIALLEGRGFT 197

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF VLHPGGKLG +   A D+MH GD++PL  +G  + DA+  +S K FGCV ++D  
Sbjct: 198 STDFSVLHPGGKLGAMLKHARDLMHKGDAVPLKPLGTKMSDALVEMSSKGFGCVGIIDGR 257

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            ++ GI+T+GD+ R+   DL T  V++VM ++PK I    L + A+++L    I+  +V 
Sbjct: 258 GQIVGIVTDGDLRRHMRADLMTALVDEVMTRDPKTISPGLLASEALEMLNSAKITAFLVT 317

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            +  K +GIVH  DLLR G+
Sbjct: 318 -EANKPVGIVHLHDLLRAGV 336


>gi|90422289|ref|YP_530659.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18]
 gi|90104303|gb|ABD86340.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18]
          Length = 337

 Score =  333 bits (854), Expect = 2e-89,   Method: Compositional matrix adjust.
 Identities = 163/317 (51%), Positives = 223/317 (70%), Gaps = 1/317 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  ALR++ AE  G+++L ++L+ +L   F  A   I   KGR+++TG+GKSGHIG K+A
Sbjct: 21  IASALRTLEAEADGVTALAAALKSDLGPAFVAAANLITNAKGRLIVTGLGKSGHIGRKVA 80

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ +SWSG   E+K ++ YA+RF I LIA
Sbjct: 81  ATFASTGTPAFFVHAAEASHGDLGMITPDDVILAMSWSGEQPEMKNLITYAKRFKIALIA 140

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++++  S +   AD+ L LPK  E+CPH LAPTTS++M LA+GDALAIALLE R F+  D
Sbjct: 141 MSADGDSTLGQAADVSLILPKAREACPHNLAPTTSSVMLLALGDALAIALLEGRGFTSID 200

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F VLHPGGKLG +   A D+MHSGD+IPL  +G  + DA+  +S K FGCV +VD    +
Sbjct: 201 FSVLHPGGKLGAMLKFARDLMHSGDAIPLRPLGTKMSDALVEMSSKGFGCVGIVDSRGLV 260

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ R+   DL T  V++VM KNPK I    L +  +++L    I+ L +V + 
Sbjct: 261 VGIVTDGDLRRHMRADLMTALVDEVMTKNPKTISPSLLASETLEILNSSKITAL-IVTEG 319

Query: 324 QKAIGIVHFLDLLRFGI 340
           +K +GIVH  DLLR G+
Sbjct: 320 KKPVGIVHLHDLLRAGV 336


>gi|146343054|ref|YP_001208102.1| arabinose 5-phosphate isomerase [Bradyrhizobium sp. ORS278]
 gi|146195860|emb|CAL79887.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. ORS278]
          Length = 333

 Score =  332 bits (852), Expect = 4e-89,   Method: Compositional matrix adjust.
 Identities = 158/320 (49%), Positives = 222/320 (69%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ VQ ALR++ A   G++++ ++L+G L   F  AV  I+  KGR ++TG+GKSGH+  
Sbjct: 14  NADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVAR 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH+AEA HGDLGMIT DD+++ LSWSG   E+K ++ Y +RF+IP
Sbjct: 74  KMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS  +S +   A IVL LPK  E+CPH LAPTTS +MQ AIGDALAIALLE R F+
Sbjct: 134 MIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGDALAIALLEGRGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG +    SD+M SGD++PL  +G  + DA+  +S K  GCV +VD  
Sbjct: 194 ALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMSAKGLGCVVIVDGR 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             + GIIT+GD+ R    DL ++SV+++M  NP+ +  + L + A+++L    I+ L+V 
Sbjct: 254 GHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVT 313

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   + +GI+H  DLLR G+
Sbjct: 314 DGA-RPVGILHMHDLLRAGV 332


>gi|90418890|ref|ZP_01226801.1| sugar isomerase, capsule expression protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336970|gb|EAS50675.1| sugar isomerase, capsule expression protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 360

 Score =  332 bits (851), Expect = 6e-89,   Method: Compositional matrix adjust.
 Identities = 162/316 (51%), Positives = 223/316 (70%), Gaps = 1/316 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A+R++  E  GL +L + L+ E++  F   ++ I  I GR++ITG+GKSGHIG+K+A+
Sbjct: 45  QSAVRTVTTEADGLRALAALLEAEMAEPFERVLDLIAEITGRLIITGVGKSGHIGAKIAA 104

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH +EA+HGDLGMI RDD ++ +SWSG + ELK I+ Y RRF +PLIA+
Sbjct: 105 TFASTGTPAFFVHPSEANHGDLGMIGRDDAVLAMSWSGETTELKGIVAYTRRFKLPLIAM 164

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  AD+ L LP+  E+CPHGLAPT+S  +Q A+GDALA+ALLE R F+  DF
Sbjct: 165 TSRPSSTLAREADVALLLPRVAEACPHGLAPTSSTTLQAALGDALAVALLERRGFTPGDF 224

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +V HPGG+LG   V   D+MH G+++PLV  G  + +AI ++S K FGC AVVD G  L 
Sbjct: 225 HVFHPGGQLGASLVHVGDLMHVGEALPLVASGTTMAEAIIVMSRKSFGCAAVVDAGGCLI 284

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+   DL   +V+ VM  NPK I  +TL   A++++   NI+ LMVV D +
Sbjct: 285 GIVTDGDLRRHLGPDLLAQTVDTVMTANPKTITPETLAAKALEMVNSSNITALMVVRD-R 343

Query: 325 KAIGIVHFLDLLRFGI 340
           + +GIVH  DLLR G+
Sbjct: 344 RPVGIVHMHDLLRIGV 359


>gi|118588411|ref|ZP_01545820.1| Sugar isomerase, KpsF/GutQ family protein [Stappia aggregata IAM
           12614]
 gi|118439117|gb|EAV45749.1| Sugar isomerase, KpsF/GutQ family protein [Stappia aggregata IAM
           12614]
          Length = 339

 Score =  330 bits (847), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 163/337 (48%), Positives = 229/337 (67%), Gaps = 1/337 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
           F  +  +    + +S M +  +  A R++  E  GLS++ ++L+  L+  F    E I+ 
Sbjct: 2   FMTTVLRDPVSEENSDMTSLCLVSAERTLETEIAGLSAVRAALKNGLAVPFQKTFELIQK 61

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            KGRVVITGIGKSGHIG+K+A++LASTGTPSFFVHA+EASHGDLGMIT  D++I LSWSG
Sbjct: 62  SKGRVVITGIGKSGHIGTKIAASLASTGTPSFFVHASEASHGDLGMITEGDVVIALSWSG 121

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  I+ Y RRF +PL+AITS   S +   ADIV+ LP   E+CPHGLAPTTSA++Q
Sbjct: 122 ETQELAGIVSYTRRFKVPLVAITSRKDSTLGRAADIVMNLPAVTEACPHGLAPTTSALIQ 181

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALA+ALLE R F+  DF V HPGG+LG     A D+MH+G+ +PLV    P+ + 
Sbjct: 182 LAVGDALAVALLEGRGFTAQDFRVFHPGGRLGASLKTAKDIMHTGERMPLVSANTPMSEG 241

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           I +++++ FG + VVDE ++L GIIT+GD+ R+   +L   S  ++M + PK +  DTL 
Sbjct: 242 IVLMTQRGFGVLGVVDELKQLIGIITDGDLRRHVSSNLLAKSAGEIMTRAPKTVSTDTLS 301

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              ++L    +I+ + V++D  + +GIVH  DLLR G
Sbjct: 302 ASILELANSLSITSVFVIEDG-RPVGIVHLHDLLRIG 337


>gi|254473076|ref|ZP_05086474.1| arabinose 5-phosphate isomerase [Pseudovibrio sp. JE062]
 gi|211957797|gb|EEA92999.1| arabinose 5-phosphate isomerase [Pseudovibrio sp. JE062]
          Length = 337

 Score =  329 bits (843), Expect = 5e-88,   Method: Compositional matrix adjust.
 Identities = 162/316 (51%), Positives = 222/316 (70%), Gaps = 1/316 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   L +L++SL   L+  F  AVE I   KGRV+++GIGKSG IG+KLA
Sbjct: 21  IQSAARTIETEVAALDALQASLANGLAEPFTKAVETIAHSKGRVIVSGIGKSGIIGTKLA 80

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVHA+EASHGDLGMIT DD++I LSWSG + EL ++L + RRF +PLIA
Sbjct: 81  ATLASTGTPAFFVHASEASHGDLGMITEDDVVIALSWSGETQELASLLGFTRRFKVPLIA 140

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +   +DI LTLP+ PE+CPHGLAPT+S ++QLA+GDALAIALLE++ F+  D
Sbjct: 141 LTRNASSALGSSSDICLTLPQVPEACPHGLAPTSSTLIQLALGDALAIALLEAKGFTAQD 200

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F V HPGGKLG   +   D+MH+GD +P+ + G  + +A+ ++++K FG + + D   KL
Sbjct: 201 FKVYHPGGKLGASLMHVKDIMHTGDHLPVAQSGMLMKEALVLMTQKGFGVLGITDAAGKL 260

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT+GD+ R+   D    +VEDVM  NPK I E  L   A++++    IS L +V+D 
Sbjct: 261 IGIITDGDLRRHISPDFLEKAVEDVMTHNPKTIEETLLAPSALEMMNSLKISSLFIVEDG 320

Query: 324 QKAIGIVHFLDLLRFG 339
            K +GI+  LDLL+ G
Sbjct: 321 -KPVGIIRTLDLLKIG 335


>gi|304393406|ref|ZP_07375334.1| arabinose 5-phosphate isomerase [Ahrensia sp. R2A130]
 gi|303294413|gb|EFL88785.1| arabinose 5-phosphate isomerase [Ahrensia sp. R2A130]
          Length = 323

 Score =  328 bits (841), Expect = 7e-88,   Method: Compositional matrix adjust.
 Identities = 169/321 (52%), Positives = 226/321 (70%), Gaps = 2/321 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K      ALR++  E RGL++L  +L  E++  F  AV+ I  I GRV++TG+GKSGH+ 
Sbjct: 4   KTDPRASALRTLDTEARGLAALRDALGSEMAPAFQKAVDTIADIGGRVIVTGMGKSGHVA 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH +EA+HGDLGMI RDD+I+ LS SG + EL   L YA+RFSI
Sbjct: 64  AKIAATLASTGTPAFFVHPSEANHGDLGMIARDDVIVALSKSGEAMELGGTLAYAKRFSI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLIA+T++  S +  HAD++L LPK  E+CPH LAPTTSAIMQLA+GDALA+ALLE R+F
Sbjct: 124 PLIAMTADPLSTLGRHADVILQLPKVDEACPHNLAPTTSAIMQLALGDALAVALLEHRSF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S +DF V HPGGKLG      SDVMH+GD +PLV+ G  + +AI  +S K FGCV VV +
Sbjct: 184 SASDFSVFHPGGKLGAQLSMVSDVMHTGDELPLVQTGTQMTEAILQISAKGFGCVGVVRD 243

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           G  L GI+T+GD+ R+    L    V+D+M   P+ +  D L   A+ +L + +I+ LMV
Sbjct: 244 GL-LIGIVTDGDLRRHLSTSLLGEMVDDIMTAAPQTVAPDLLAAAALDILNRRSITTLMV 302

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
            +D  + +GIVH  DLLR G+
Sbjct: 303 TEDG-RPVGIVHLHDLLRVGV 322


>gi|254502653|ref|ZP_05114804.1| sugar isomerase, KpsF/GutQ family [Labrenzia alexandrii DFL-11]
 gi|222438724|gb|EEE45403.1| sugar isomerase, KpsF/GutQ family [Labrenzia alexandrii DFL-11]
          Length = 337

 Score =  326 bits (836), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 220/314 (70%), Gaps = 1/314 (0%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R++  E  GLS+L  +L+  L+  F  A   I++I GRV+++GIGKSGHIG+K+A++
Sbjct: 23  SAERALETEMAGLSALRVALKDGLAAPFQKACSLIQSISGRVIVSGIGKSGHIGTKIAAS 82

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FFVHA EASHGDLGMIT+DD+++ LSWSG + EL +++ Y RRF +PL+A+T
Sbjct: 83  LASTGTPAFFVHATEASHGDLGMITQDDVVLALSWSGETQELASLVAYTRRFKVPLVAMT 142

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S   S +   +DIVL LP   E+CPHGLAPTTSA++QLA+GDAL +ALLE R F+  D+ 
Sbjct: 143 SRLDSTLGNASDIVLKLPSVAEACPHGLAPTTSALVQLALGDALTVALLEGRGFTVQDYK 202

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           + HPGG+LG     A D+MHSG+++PLV    P+ D I ++S+K FG + VVDE  +L G
Sbjct: 203 LFHPGGRLGASLKSAKDIMHSGEALPLVTASTPMTDGIVVMSQKGFGVLGVVDELNQLMG 262

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           IIT+GD+ R+   +L   +  D+M + PK +    L    ++LL   +I+ + VV+D  +
Sbjct: 263 IITDGDLRRHVTTNLLEKTAGDIMTRGPKTVHPGALSASILELLNSSSITTVFVVEDS-R 321

Query: 326 AIGIVHFLDLLRFG 339
            +GIVH  DLLR G
Sbjct: 322 PVGIVHMHDLLRVG 335


>gi|148252917|ref|YP_001237502.1| arabinose 5-phosphate isomerase [Bradyrhizobium sp. BTAi1]
 gi|146405090|gb|ABQ33596.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. BTAi1]
          Length = 333

 Score =  323 bits (829), Expect = 2e-86,   Method: Compositional matrix adjust.
 Identities = 158/320 (49%), Positives = 221/320 (69%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ +Q ALR++ A   G++++ ++L G L   F  AV  I+  KGR ++TG+GKSGH+  
Sbjct: 14  NADIQSALRTLDAGSNGIAAISAALHGPLGAAFAAAVALIRQAKGRAILTGLGKSGHVAR 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH+AEA HGDLGMIT DD++I LSWSG   E+K ++ Y +RF+IP
Sbjct: 74  KMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVIALSWSGEQPEMKTLVNYTKRFAIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS  +S +   A IVL LPK  E+CPH LAPTTS +MQ AIGDALAIALLE R F+
Sbjct: 134 MIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGDALAIALLEGRGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG +    SD+M SGD++PL  +G  + DA+  +S K  GCV +VD  
Sbjct: 194 ALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMSAKGLGCVVIVDGR 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             + GIIT+GD+ R    DL +++V+++M  NP+ +  + L + A+++L    I+ L+V 
Sbjct: 254 GHVAGIITDGDLRRKMRADLLSVTVDEIMTANPRTVGREALASEALEILNSAKITTLIVT 313

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   K +GI+H  DLLR G+
Sbjct: 314 DGA-KPVGILHMHDLLRAGV 332


>gi|328542463|ref|YP_004302572.1| Sugar isomerase, KpsF/GutQ family protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412210|gb|ADZ69273.1| Sugar isomerase, KpsF/GutQ family protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 337

 Score =  323 bits (828), Expect = 3e-86,   Method: Compositional matrix adjust.
 Identities = 153/316 (48%), Positives = 224/316 (70%), Gaps = 1/316 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R++  E   L +L  +L+  L   F   V+ +++I GRV++TGIGKSGHIG+K+A
Sbjct: 21  LESADRTLATEISALIALRDALRNGLGTPFVRTVDLLRSISGRVIVTGIGKSGHIGTKMA 80

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +++ASTGTP+FFVHA+EASHGDLGMIT DD+++ +SWSG + EL +I+ Y RRF +PL+A
Sbjct: 81  ASMASTGTPAFFVHASEASHGDLGMITPDDVVVAISWSGETMELASIIAYTRRFKVPLVA 140

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS  +S +   ADIVL +P+  E+CPHGLAPT+S ++Q+AIGDALA+ALLE+R F+  +
Sbjct: 141 ITSSPQSALGKAADIVLAMPQVTEACPHGLAPTSSTLIQMAIGDALAVALLEARGFTAQE 200

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F + HPGGKLG     A D+MHSG+++PL   G  + +AI ++++K FG V VVDE  +L
Sbjct: 201 FRIFHPGGKLGASLRLARDIMHSGEAMPLTPKGTLMREAIVMMTQKGFGIVGVVDELNRL 260

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ R+   +    +VE++M   PK I  D L   A++ +   +I+ + VV+D 
Sbjct: 261 VGIVTDGDLRRHISTNFLDKTVEEIMTSTPKTIPGDILSAAALEFINASSITAVFVVEDG 320

Query: 324 QKAIGIVHFLDLLRFG 339
            + IGI+H  DLLR G
Sbjct: 321 -RPIGIIHLHDLLRIG 335


>gi|27382857|ref|NP_774386.1| capsule expression protein [Bradyrhizobium japonicum USDA 110]
 gi|27356030|dbj|BAC53011.1| capsule expression protein [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score =  322 bits (825), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 156/319 (48%), Positives = 220/319 (68%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           ++V+ ALR++  E  G+++L ++L+G L   F  AV+ I+  KGRV++TG+GKSGH+G K
Sbjct: 52  ASVESALRTLETESGGINALAAALRGPLGATFAKAVDMIRQAKGRVIVTGLGKSGHMGRK 111

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH AEA+HGDLGMIT DD+I+ LSWSG   E+K ++ Y+ RF+IP+
Sbjct: 112 IAATLASTGTPAFFVHTAEAAHGDLGMITADDVIMALSWSGEQPEMKTLVNYSARFAIPM 171

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +   AD+V+ LPK  E+CPH LAPTTS +MQ AIGDALAIALLE R F+ 
Sbjct: 172 IAVTSNAASSLGQAADLVIELPKAREACPHNLAPTTSTLMQAAIGDALAIALLEGRGFTA 231

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGGKLG +     D M +G  IP+   G  + +A+  +S K  GCV +V++  
Sbjct: 232 LEFAHFHPGGKLGAMLKFVRDYMRTGAEIPVKPEGTKMSEAVVEMSAKGLGCVCIVNDAN 291

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +  GIIT+GD+ R+   DL T+SV+D+M + PK +    L T  +++L    I+ L+V  
Sbjct: 292 EAVGIITDGDLRRHMRPDLLTVSVDDIMTRQPKSVPPSMLATEMIEVLNTRKITTLLVT- 350

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  K +GIVH  DLLR G+
Sbjct: 351 EAGKVVGIVHLHDLLRAGV 369


>gi|110635071|ref|YP_675279.1| KpsF/GutQ family protein [Mesorhizobium sp. BNC1]
 gi|110286055|gb|ABG64114.1| KpsF/GutQ family protein [Chelativorans sp. BNC1]
          Length = 331

 Score =  322 bits (825), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 160/291 (54%), Positives = 207/291 (71%), Gaps = 1/291 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           LS  F  AVE I  I GRV++TG+GKSGHIG+K+A+TLASTGTP+FFVH  EA+HGDLGM
Sbjct: 40  LSESFAEAVEMIARISGRVIVTGVGKSGHIGTKIAATLASTGTPAFFVHPVEANHGDLGM 99

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I  DD II LSWSG S ELK I+ YARRFSIPLIA+TS ++S +A  + +VL LPK  E+
Sbjct: 100 IAPDDAIIALSWSGESAELKGIVAYARRFSIPLIAMTSGSRSALARESSVVLCLPKVQEA 159

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CPHGLAPT+S ++QLA GDALAIALLE+R F+ + F   HPGG+LG       D+MH+G+
Sbjct: 160 CPHGLAPTSSTLVQLAAGDALAIALLEARGFTPDHFRTFHPGGQLGAKLTRIGDIMHTGE 219

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +PLV  G  + +AI  +S K FGCV + +    L GI+T+GD+ R+   DL  +SV++V
Sbjct: 220 RMPLVSSGTGMREAILEISRKGFGCVGITNGEGALIGIVTDGDLRRHMDSDLLAMSVDEV 279

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   PK I  DTL   A+Q++    I+ LMVV++  + +GIVH  DLLR G
Sbjct: 280 MTHAPKTIKPDTLAAAALQMINSSAITTLMVVENG-RPVGIVHLHDLLRIG 329


>gi|312114077|ref|YP_004011673.1| KpsF/GutQ family protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219206|gb|ADP70574.1| KpsF/GutQ family protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 345

 Score =  320 bits (821), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 160/320 (50%), Positives = 212/320 (66%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S    A R++     GL +L +SL   L+  F  AV  I A +GRV++TG+GKSGH+G 
Sbjct: 26  GSAAAVARRTLECSLDGLLALRASLANGLALDFERAVALIHACRGRVIVTGMGKSGHVGQ 85

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGMIT  D ++ LSWSG + EL +IL Y+RRF +P
Sbjct: 86  KIAATLASTGTPAQFVHPAEASHGDLGMITAADTVLALSWSGETVELASILTYSRRFRVP 145

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+TS  +S +   AD+VL LP   E+CPHGLAPTTS + QLA+GD LAIALLE R F+
Sbjct: 146 LIALTSRRESALGKAADVVLQLPPVKEACPHGLAPTTSTLTQLALGDCLAIALLEGRGFT 205

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF V HPGG+LG      +D+MH G+ +PL     P+  A+  ++EK FGC+ VVD  
Sbjct: 206 ASDFKVFHPGGQLGANLKHVADIMHKGERMPLAGADAPMSAALVTMTEKAFGCLGVVDAE 265

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GD+ R+   DL      D+M  NPK I    L + A+Q++ +  I+ L VV
Sbjct: 266 GRLAGIVTDGDLRRHMAGDLLGRRAADIMTCNPKTITPTMLASAALQIVNEKKITALFVV 325

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD    +GIVH  DLLR G+
Sbjct: 326 DDGVP-VGIVHIHDLLRVGV 344


>gi|227820787|ref|YP_002824757.1| sugar isomerase, KpsF/GutQ family protein [Sinorhizobium fredii
           NGR234]
 gi|227339786|gb|ACP24004.1| sugar isomerase, KpsF/GutQ family protein [Sinorhizobium fredii
           NGR234]
          Length = 336

 Score =  319 bits (817), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 160/335 (47%), Positives = 226/335 (67%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKG 65
            + V  +GHS   ++ +    R++     G+ +L   L  + SF      AVE +    G
Sbjct: 3   LRHVKGEGHS--PSAILDSIGRTLTTASNGIKALAEHLATDESFAQSLVEAVELVGDGHG 60

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGM+T DD++I+LSWSG + 
Sbjct: 61  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETA 120

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I+S   S++A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 121 ELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 180

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H  D +PL+ +G P+ +A+  
Sbjct: 181 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHVADQMPLLVVGRPMSEAVIE 240

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V +VDEG  L G+IT+GD+ R+   DL    VE+VM  +PKVI  D L + A
Sbjct: 241 MSAKGFGVVGIVDEGGVLVGVITDGDLRRHMAGDLLGQPVEEVMSCHPKVIQADVLASAA 300

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ +++H ++VL +VD+     GI+H  DLLR G+
Sbjct: 301 MEFMQEHKVTVLFLVDETGMPEGILHIHDLLRAGV 335


>gi|154245839|ref|YP_001416797.1| KpsF/GutQ family protein [Xanthobacter autotrophicus Py2]
 gi|154159924|gb|ABS67140.1| KpsF/GutQ family protein [Xanthobacter autotrophicus Py2]
          Length = 338

 Score =  318 bits (816), Expect = 6e-85,   Method: Compositional matrix adjust.
 Identities = 159/319 (49%), Positives = 215/319 (67%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           ++V  AL ++ AEK GL++L  ++ G L   F  AV  I+   GRV++TG+GKSGH+  K
Sbjct: 20  ASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQNSHGRVIVTGMGKSGHVARK 79

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ +VH AEASHGDLGMIT DD+I+ LSWSG + EL  I+ Y+RRF +PL
Sbjct: 80  IAATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSGETVELHDIVDYSRRFDVPL 139

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA TS  +S +A  A +VL+LP   E+CPHGLAPTTS +MQLA+GDALA+ALL+SR F+ 
Sbjct: 140 IAFTSNTESALASSASVVLSLPVAQEACPHGLAPTTSTLMQLALGDALAVALLQSRGFTA 199

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGGKLG       DVM  GD++P+V  G  +  A+  +S K  GCV VV    
Sbjct: 200 LDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAALVEMSTKGLGCVGVVGPDG 259

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L GI+T+GD+ R+   DL T +V+++M   PK +  D L + A+ +L    I+ LMVV 
Sbjct: 260 ALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLASEALNILNSRKITALMVV- 318

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           + Q  +G++H  DLL  GI
Sbjct: 319 EGQAPVGVLHIHDLLLTGI 337


>gi|16264321|ref|NP_437113.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
 gi|15140458|emb|CAC48973.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
          Length = 337

 Score =  316 bits (810), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 214/314 (68%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 23  RTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 82

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+I+I+S
Sbjct: 83  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISISS 142

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 143 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKA 202

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V + DE  KL G+
Sbjct: 203 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSAKGFGVVGITDESGKLIGV 262

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    V++VM +NP+V+  + L + AM+ L +H ++VL +VD+    
Sbjct: 263 ITDGDLRRHMAGDLLAQPVQEVMSRNPRVVRSEVLASAAMEFLEEHQVTVLFLVDEAGAP 322

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 323 VGILHIHDLLRAGV 336


>gi|150395419|ref|YP_001325886.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150026934|gb|ABR59051.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 334

 Score =  315 bits (808), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 153/314 (48%), Positives = 212/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 20  RTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 79

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+I+I+S
Sbjct: 80  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISISS 139

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A ++++ L LPK PE+CPHGLAPTTSA++QLAIGDALAIALLE R FS  DF  
Sbjct: 140 NRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGDALAIALLERRGFSAEDFKT 199

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V +VDE  KL G+
Sbjct: 200 FHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMSAKGFGVVGIVDESGKLIGV 259

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    VED+M   P+V+  D L + AM+ + +H I+VL +V D    
Sbjct: 260 ITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAMEFMEEHKITVLFLVGDAGAP 319

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 320 VGILHIHDLLRAGV 333


>gi|218531823|ref|YP_002422639.1| KpsF/GutQ family protein [Methylobacterium chloromethanicum CM4]
 gi|218524126|gb|ACK84711.1| KpsF/GutQ family protein [Methylobacterium chloromethanicum CM4]
          Length = 340

 Score =  315 bits (806), Expect = 9e-84,   Method: Compositional matrix adjust.
 Identities = 159/315 (50%), Positives = 210/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+TLA
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATLA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPSLYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEAGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVDQ-GR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|307320141|ref|ZP_07599561.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
 gi|306894187|gb|EFN24953.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
          Length = 336

 Score =  314 bits (805), Expect = 1e-83,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 213/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 22  RTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 81

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+++I S
Sbjct: 82  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIVSICS 141

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 142 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 201

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V + DE  KL G+
Sbjct: 202 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSAKGFGVVGITDESGKLIGV 261

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    V++VM +NP+VI  D L + AM+ ++ H ++VL +VD+    
Sbjct: 262 ITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAAMEFMQDHKVTVLFLVDEAGAP 321

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 322 VGILHIHDLLRAGV 335


>gi|150377115|ref|YP_001313711.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150031662|gb|ABR63778.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 333

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 153/314 (48%), Positives = 211/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 19  RTLATATNGIRALADHLSSDETFADALVNAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 78

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+I+I S
Sbjct: 79  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIISICS 138

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A ++++ L LPK PE+CPHGLAPTTSA++QLAIGDALAIALLE R FS  DF  
Sbjct: 139 NRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGDALAIALLERRGFSAEDFKT 198

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V +VDE  KL G+
Sbjct: 199 FHPGGKLGAQLRLVHELAHGAGQMPLLPVGRPMSEAVIEMSAKGFGVVGIVDESGKLVGV 258

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    VE +M  NP+V+  D L + AM+ + +H I+VL +V D    
Sbjct: 259 ITDGDMRRHMTADLLAQPVEAIMSHNPRVLSRDVLASAAMEFMEEHKITVLFLVGDAGAP 318

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 319 VGILHIHDLLRAGV 332


>gi|298291853|ref|YP_003693792.1| KpsF/GutQ family protein [Starkeya novella DSM 506]
 gi|296928364|gb|ADH89173.1| KpsF/GutQ family protein [Starkeya novella DSM 506]
          Length = 338

 Score =  313 bits (803), Expect = 2e-83,   Method: Compositional matrix adjust.
 Identities = 145/313 (46%), Positives = 219/313 (69%), Gaps = 1/313 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++  E  GL++L + + G+L      A   I+  +GRV++TG+GKSGHIG K+A+TLAS
Sbjct: 27  RTLSIEAEGLAALGALIDGDLGDAIERATLLIEGARGRVIVTGMGKSGHIGRKIAATLAS 86

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+ F+HAAEASHGDLGM+T DD+++ +SWSG + EL  +++YARRF++PL+A+TS  
Sbjct: 87  TGTPALFLHAAEASHGDLGMVTPDDVLLAISWSGETAELSDVVHYARRFAVPLLAMTSNA 146

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +   AD+ + LP+  E+CP+GLAPTTS ++QLA+GDALA+ LLE R FS +DF V H
Sbjct: 147 ESTLGRAADVGMVLPRAEEACPNGLAPTTSTLLQLALGDALAVLLLERRGFSASDFRVFH 206

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGGKLG   +  +D+MH G  +PLV+ G P+ D +  ++ KRFGC  V+D+  +L GI+T
Sbjct: 207 PGGKLGARLLKVADLMHQGTEMPLVRFGTPMSDVLIEITGKRFGCCGVLDDSGRLAGIVT 266

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD+ R+   DL     E VM ++P V+  + L + A+ L+ +  ++V+  V +    +G
Sbjct: 267 DGDLRRHMSADLLAQPAEAVMTRSPLVVRPEDLASAALGLMNRRPVTVVFAVAE-DAPVG 325

Query: 329 IVHFLDLLRFGII 341
           I+H  D+LR G++
Sbjct: 326 ILHIHDILRAGVL 338


>gi|188583481|ref|YP_001926926.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
 gi|179346979|gb|ACB82391.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
          Length = 341

 Score =  313 bits (801), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 155/327 (47%), Positives = 216/327 (66%), Gaps = 3/327 (0%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            + ++   +  ALR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKS
Sbjct: 15  EATVRAPAIASALRTIETEREGLACLMAAIDNGLGEPFARAVERIGAARGRVICTGMGKS 74

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+  K+A+T ASTGTP+ +VH AEASHGDLGMI  +D+++ LSWSG + EL  I+ Y R
Sbjct: 75  GHVARKIAATFASTGTPALYVHPAEASHGDLGMIQPEDVVLALSWSGETTELADIIGYTR 134

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R+ + L+AITS   S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE
Sbjct: 135 RYRVGLVAITSNAASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLE 194

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           +R FS  DF V HPGG+LG       +VMH G ++P+V +G  +  A+  +  K FG V 
Sbjct: 195 ARGFSARDFSVFHPGGRLGASLRQVREVMHGGANLPVVALGTAMRAAVAEIDAKGFGSVL 254

Query: 256 VVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD    L GI+T+GD+ R     + L+ + VE VM KNP+ I  +TLL  A+Q+     
Sbjct: 255 VVDAEGALAGILTDGDVRRAIFSREGLDRMPVEAVMTKNPRTITPETLLAKALQIQEAMK 314

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I+ L+VV+D  + +G+VH+ DLLR G+
Sbjct: 315 ITALVVVED-GRPVGLVHYHDLLRTGV 340


>gi|307307061|ref|ZP_07586800.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306902001|gb|EFN32600.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 336

 Score =  312 bits (800), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 212/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 22  RTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 81

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT + FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+++I S
Sbjct: 82  ASTGTSAHFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIVSICS 141

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 142 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 201

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V + DE  KL G+
Sbjct: 202 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSAKGFGVVGITDESGKLIGV 261

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    V++VM +NP+VI  D L + AM+ ++ H ++VL +VD+    
Sbjct: 262 ITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAAMEFMQDHKVTVLFLVDEAGAP 321

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 322 VGILHIHDLLRAGV 335


>gi|15964325|ref|NP_384678.1| putative capsule expression protein [Sinorhizobium meliloti 1021]
 gi|15073502|emb|CAC45144.1| Putative arabinose 5-phosphate isomerase [Sinorhizobium meliloti
           1021]
          Length = 337

 Score =  312 bits (800), Expect = 5e-83,   Method: Compositional matrix adjust.
 Identities = 151/314 (48%), Positives = 212/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 23  RTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 82

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT + FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+++I S
Sbjct: 83  ASTGTSAHFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIVSICS 142

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 143 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 202

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V + DE  KL G+
Sbjct: 203 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSAKGFGVVGITDESGKLIGV 262

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL    V++VM +NP+VI  D L + AM+ ++ H ++VL +VD+    
Sbjct: 263 ITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAAMEFMQDHKVTVLFLVDEAGAP 322

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLLR G+
Sbjct: 323 VGILHIHDLLRAGV 336


>gi|58531784|gb|AAW78655.1| KpsF3 [Sinorhizobium fredii]
          Length = 337

 Score =  311 bits (798), Expect = 6e-83,   Method: Compositional matrix adjust.
 Identities = 156/335 (46%), Positives = 224/335 (66%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKG 65
            + V  +GHS   ++ +    R++     G+ +L   L  + SF      AVE +    G
Sbjct: 4   LRHVKGEGHS--PSAILDSIGRTLATATNGIKALAEHLATDESFARSLVEAVELVGDGHG 61

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGM+T DD++I+LSWSG + 
Sbjct: 62  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETA 121

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I+S   S++A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 122 ELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 181

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H  + +PL+ +G P+ +A+  
Sbjct: 182 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHVAEQMPLLAVGRPMSEAVIE 241

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V ++D    L G+IT+GD+ R+   DL    VE+VM  +PKVI  D L + A
Sbjct: 242 MSSKGFGVVGIIDGSGVLVGVITDGDLRRHMAGDLLGQPVEEVMSCHPKVIHADVLASAA 301

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ +++H ++VL +VD+     GI+H  DLLR G+
Sbjct: 302 MEFMQEHKVTVLFLVDEAGMPEGILHIHDLLRAGV 336


>gi|254562948|ref|YP_003070043.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens DM4]
 gi|254270226|emb|CAX26220.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens DM4]
          Length = 340

 Score =  311 bits (798), Expect = 7e-83,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+T A
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATFA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEAGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVDQ-GR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|163853013|ref|YP_001641056.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
 gi|240140354|ref|YP_002964833.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
 gi|163664618|gb|ABY31985.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
 gi|240010330|gb|ACS41556.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
          Length = 340

 Score =  311 bits (797), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 157/315 (49%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+T A
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATFA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEKGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVDQ-GR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|154252349|ref|YP_001413173.1| KpsF/GutQ family protein [Parvibaculum lavamentivorans DS-1]
 gi|154156299|gb|ABS63516.1| KpsF/GutQ family protein [Parvibaculum lavamentivorans DS-1]
          Length = 329

 Score =  311 bits (796), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 153/318 (48%), Positives = 217/318 (68%), Gaps = 5/318 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+++ E  GL  L +SL G     F  AVE++    GRV++TG+GKSGHI  K+A
Sbjct: 17  LASAQRTLMLEIEGLKQLAASLDG----PFTEAVEQLGEATGRVIVTGMGKSGHIARKIA 72

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+ +VH  EASHGDLGMIT  D+I+ LSWSG + EL +I+ +A+RF+IPL+A
Sbjct: 73  ATLASTGTPAHYVHPGEASHGDLGMITSGDVILALSWSGETAELSSIISHAKRFAIPLVA 132

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+E KS +   ADI L LP+  E+CP+ LAPTTS  MQLA+GDALA+ALLE + FS  D
Sbjct: 133 MTAEAKSALGTAADIGLFLPRAEEACPNKLAPTTSTTMQLALGDALAMALLERKGFSARD 192

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F V HPGGKLG +    S+VMH+GD++PL     P+ + + ++S+K  GC  +VD   KL
Sbjct: 193 FSVFHPGGKLGAMLRHVSEVMHTGDALPLAAPATPMSEVLLVMSQKSLGCAGIVDGAGKL 252

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            G+IT+GDI RN  + L   +  D+M ++PK +    L + A+++L +  I+ L VV+D 
Sbjct: 253 VGVITDGDIRRNSGEGLLGRNASDIMNRSPKTVAPGLLASEAVKILNEKKITSLFVVEDG 312

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G+VH  D L+ G+I
Sbjct: 313 -RPVGLVHIHDFLKAGVI 329


>gi|170740239|ref|YP_001768894.1| KpsF/GutQ family protein [Methylobacterium sp. 4-46]
 gi|168194513|gb|ACA16460.1| KpsF/GutQ family protein [Methylobacterium sp. 4-46]
          Length = 338

 Score =  309 bits (792), Expect = 3e-82,   Method: Compositional matrix adjust.
 Identities = 155/315 (49%), Positives = 210/315 (66%), Gaps = 1/315 (0%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A+R+I  E   L +L  +L GEL   F  AV  I A  GRV ++GIGKSGHI  K+A+T
Sbjct: 24  SAIRTIRTEAEALHTLARALDGELRAGFAEAVAAIHASPGRVFVSGIGKSGHIARKIAAT 83

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ F+H +EASHGDLGMIT  D++I LSWSG + EL  I+ +A+RF++PLIA+T
Sbjct: 84  LASTGTPATFIHPSEASHGDLGMITAQDIVIALSWSGETAELGDIVSFAKRFTVPLIALT 143

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S  +S +   ADI+L LP   E+CPH LAPT+S++MQLA+GDALAIALLE R FS +DF 
Sbjct: 144 SNPQSTLGLAADILLPLPLVKEACPHNLAPTSSSVMQLALGDALAIALLERRGFSASDFK 203

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           V HPGGKL         +MH+ D +PLV  G P+ +A+  +  KRFGC  VVDE  +L G
Sbjct: 204 VFHPGGKLAARLKTVRQLMHTDDEMPLVPRGIPMSEALLAIMGKRFGCAGVVDEAGRLVG 263

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           IIT GD+ R+   DL    V+ +M   P  +L   L + A++++ +  I+ + VV+   +
Sbjct: 264 IITNGDLRRHMGSDLLHRPVDAIMTPAPITVLPGGLASAALEMMNRRQITAMFVVEGG-R 322

Query: 326 AIGIVHFLDLLRFGI 340
            IGI+H  DLL+ G+
Sbjct: 323 PIGILHIHDLLQVGV 337


>gi|307315781|ref|ZP_07595296.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306898573|gb|EFN29245.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 337

 Score =  309 bits (792), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 211/314 (67%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  + +F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 23  RTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 82

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+++I S
Sbjct: 83  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPVVSICS 142

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 143 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 202

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S + FG V + DE  KL G+
Sbjct: 203 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSARGFGVVGITDESGKLVGV 262

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+   DL     ++VM +NP+VI  D L + AM+ ++ H ++VL +VD+    
Sbjct: 263 ITDGDLRRHMAGDLLAQPAQEVMSRNPRVIKGDVLASAAMEFMQDHQVTVLFLVDEAGAP 322

Query: 327 IGIVHFLDLLRFGI 340
           +GI+H  DLL  G+
Sbjct: 323 VGILHIHDLLHAGV 336


>gi|307299858|ref|ZP_07579643.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306904747|gb|EFN35330.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 329

 Score =  304 bits (779), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 223/314 (71%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R+I     G+++L   L+   + +  F  A+E + + +GRVV+ G+GKSGHIG K+A+TL
Sbjct: 15  RTIATAADGINALAGRLEDNAALRRSFVDAIELVASKRGRVVVAGVGKSGHIGRKIAATL 74

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+RF++P+I++TS
Sbjct: 75  ASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAKRFNVPVISVTS 134

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 135 NADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 194

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V VV    +L G+
Sbjct: 195 FHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVGVVGGDGELVGV 254

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+VL +VDD  + 
Sbjct: 255 ITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKITVLFLVDDVGRP 314

Query: 327 IGIVHFLDLLRFGI 340
            GI+H  DLLR G+
Sbjct: 315 SGILHVHDLLRAGV 328


>gi|307320220|ref|ZP_07599639.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
 gi|306894099|gb|EFN24866.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
          Length = 329

 Score =  304 bits (778), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 224/314 (71%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R+I     G+++L + L+ +  L   F  A+E + + +GRVV+ G+GKSGHIG K+A+TL
Sbjct: 15  RTIATAADGINALAACLEDDAVLRRSFVDAIELVASKRGRVVVAGVGKSGHIGRKIAATL 74

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+RF++P+I++TS
Sbjct: 75  ASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAKRFNVPVISVTS 134

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 135 NADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 194

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V VV    +L G+
Sbjct: 195 FHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVGVVGGDGELVGV 254

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+VL +VDD  + 
Sbjct: 255 ITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKITVLFLVDDVGRP 314

Query: 327 IGIVHFLDLLRFGI 340
            GI+H  DLLR G+
Sbjct: 315 SGILHVHDLLRAGV 328


>gi|158422330|ref|YP_001523622.1| sugar isomerase [Azorhizobium caulinodans ORS 571]
 gi|158329219|dbj|BAF86704.1| sugar isomerase [Azorhizobium caulinodans ORS 571]
          Length = 354

 Score =  304 bits (778), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 154/321 (47%), Positives = 218/321 (67%), Gaps = 1/321 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++  +  AL ++  E  GL++L +++   L   F  AV  I   KGRV++TG+GKSGH+ 
Sbjct: 34  RSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATILGAKGRVIVTGMGKSGHVA 93

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+ +VH AEASHGDLGM+  +D+II LSWSG + EL+ I+ YA RF +
Sbjct: 94  RKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWSGETAELRDIVDYALRFDV 153

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLIAITS  +S +A  A +VL LP  PE+CP GLAPTTS +MQLA+GDALA+ALLESR F
Sbjct: 154 PLIAITSNRESALARAARVVLALPLSPEACPLGLAPTTSTLMQLAMGDALAVALLESRGF 213

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF   HPGGKLG       DVM +G+++PL + G  + + +  +S K  GCVAV+D 
Sbjct: 214 TAKDFRTFHPGGKLGANLKFVRDVMRAGEALPLARSGALMGEVLVEMSAKGLGCVAVLDG 273

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L GI+T+GD+ R+   DL +  V+ +M ++PK I  D +++ A++LL    I+ LMV
Sbjct: 274 DGRLAGIVTDGDLRRHMANDLPSRPVDAIMSRSPKTIRPDQMVSEALRLLNTAKITALMV 333

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V+D  + +G +H  DLL  G+
Sbjct: 334 VED-GRPVGAIHIHDLLHVGV 353


>gi|296533343|ref|ZP_06895946.1| arabinose 5-phosphate isomerase [Roseomonas cervicalis ATCC 49957]
 gi|296266333|gb|EFH12355.1| arabinose 5-phosphate isomerase [Roseomonas cervicalis ATCC 49957]
          Length = 329

 Score =  303 bits (775), Expect = 3e-80,   Method: Compositional matrix adjust.
 Identities = 151/321 (47%), Positives = 208/321 (64%), Gaps = 2/321 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-AIKGRVVITGIGKSGHIG 79
             ++  A  ++  E +GL +L  +L+  L+     A++ I+    GRV++TG+GKSGH+G
Sbjct: 9   TGSLDAARNTLDLEIQGLQALRGALEEGLAEPLARAIQAIRDTANGRVILTGMGKSGHVG 68

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP++FVH  EASHGDLGMI  +D+++ LSWSG + EL  I+ Y RRF +
Sbjct: 69  RKIAATLASTGTPAYFVHPGEASHGDLGMIRSEDVVLALSWSGEAPELSDIVAYTRRFDV 128

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAIT+   S +A  ADI L LP  PE+CP+GLAPTTS  MQ+A+GDALA+ALL  R F
Sbjct: 129 TLIAITARQGSSLASAADIALILPAMPEACPNGLAPTTSTTMQMALGDALAVALLSQRGF 188

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGGKLG     A ++MH G ++P+V     L  AI  ++ KRFG  AVVDE
Sbjct: 189 SAKDFRQFHPGGKLGAQLRRARELMHDGTAVPMVPQTASLSQAIVEMTGKRFGVTAVVDE 248

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G +T+GD+ R+F        V +VM + P+ I  D L   A+ L+  H I+ L V
Sbjct: 249 AGRLVGAVTDGDVRRSFEGAFVDRPVREVMNREPRTIPPDMLAQEALALMNAHRITSLFV 308

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V++ Q+  GI+H  DLLR G+
Sbjct: 309 VEE-QRPSGILHMHDLLRAGV 328


>gi|16264297|ref|NP_437089.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
 gi|15140434|emb|CAC48949.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
          Length = 329

 Score =  302 bits (774), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 156/314 (49%), Positives = 222/314 (70%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R+I     G+++L   L+   + +  F  A+E + + +GRVV+ G+GKSGHIG K+A+TL
Sbjct: 15  RTIATAADGINALAGCLEDNAALRRSFVDAIELVASKRGRVVVAGVGKSGHIGRKIAATL 74

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+RF++P+I++TS
Sbjct: 75  ASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAKRFNVPVISVTS 134

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 135 NADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 194

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V VV    +L G+
Sbjct: 195 FHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVGVVGGDGELVGV 254

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+  + L  L+VE VM   P+VI    L + AM++++   I+VL +VDD  + 
Sbjct: 255 ITDGDLRRHMSQSLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKITVLFLVDDVGRP 314

Query: 327 IGIVHFLDLLRFGI 340
            GI+H  DLLR G+
Sbjct: 315 SGILHVHDLLRAGV 328


>gi|220921255|ref|YP_002496556.1| KpsF/GutQ family protein [Methylobacterium nodulans ORS 2060]
 gi|219945861|gb|ACL56253.1| KpsF/GutQ family protein [Methylobacterium nodulans ORS 2060]
          Length = 338

 Score =  300 bits (769), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 154/315 (48%), Positives = 209/315 (66%), Gaps = 1/315 (0%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A+R++  E   L SL  +L GEL   F  AV  I  I GRVV++GIGKSGHI  K+A+T
Sbjct: 24  SAIRTVRTEADALHSLARALDGELRAGFAAAVAAIHNIPGRVVVSGIGKSGHIARKIAAT 83

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ F+H AEASHGDLGMIT  D++I LSWSG + EL  I+ +A+RF++ LIA+T
Sbjct: 84  LASTGTPAAFIHPAEASHGDLGMITPQDIVIALSWSGETAELGDIVSFAKRFAVTLIALT 143

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +  +S +   ADI+L LP   E+CPH LAPT+S++MQLA+GDALAIALLE R FS NDF 
Sbjct: 144 ANPQSTLGLAADILLPLPLVKEACPHNLAPTSSSVMQLALGDALAIALLERRGFSANDFK 203

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           V HPGGKL         +MH GD +PLV  G P+ +A+  +  KRFGC  VVD   +L G
Sbjct: 204 VFHPGGKLAARLKTVGQLMHVGDEMPLVPRGIPMSEALLAIMGKRFGCAGVVDAEGRLVG 263

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +IT GD+ R+   DL    V+ +M  +P  +      + A++L+ +  I+ + VV++  +
Sbjct: 264 MITNGDLRRHMGSDLLHRPVDAIMTTSPITVPPGGFASAALELMNRREITAMFVVEE-DR 322

Query: 326 AIGIVHFLDLLRFGI 340
            IGI+H  DLL+ G+
Sbjct: 323 PIGILHIHDLLQVGV 337


>gi|23015177|ref|ZP_00054961.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Magnetospirillum magnetotacticum MS-1]
          Length = 330

 Score =  300 bits (769), Expect = 2e-79,   Method: Compositional matrix adjust.
 Identities = 144/320 (45%), Positives = 205/320 (64%), Gaps = 4/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A R +  E R L SL +SL       F  AV  I+   GRVV+TG+GKSGH+  
Sbjct: 14  SEALATARRVLATEARALDSLATSL----GDAFLKAVTLIEGAPGRVVVTGMGKSGHVAR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ASTG P+F+VH AEASHGDLGM+TRDD ++ LS SG + EL  ++ Y RRF IP
Sbjct: 70  KIAATMASTGCPAFYVHPAEASHGDLGMVTRDDAVVALSNSGETPELSDVIAYTRRFEIP 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ITS + S +A  +D+ L LP  PE+CP GLAPTTS  + LA+GDALA+ LLE + F+
Sbjct: 130 LIGITSRDGSTLAAASDVALVLPPNPEACPMGLAPTTSTTLMLALGDALAVTLLERKGFT 189

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGGKLG   +  +D+MH GD +PLV     + D + +++ K  GC  V+D G
Sbjct: 190 AADFQVFHPGGKLGQRLLKVTDLMHGGDGLPLVGTEASMADVLLVMTAKSLGCAGVIDSG 249

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            KL G++T+GD+ R+   DL T    +VM  +P+ +  + L   A++ + + +I+ L VV
Sbjct: 250 GKLAGVLTDGDLRRHMSPDLLTAKAAEVMTASPRTVPPNLLAAEALRQMNERSITSLFVV 309

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +   + +G++H  D LR G+
Sbjct: 310 ESDGRPVGVLHVHDCLRAGL 329


>gi|150377133|ref|YP_001313729.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150031680|gb|ABR63796.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 329

 Score =  300 bits (767), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 157/314 (50%), Positives = 221/314 (70%), Gaps = 2/314 (0%)

Query: 29  RSIIAEKRGLSSLESSLQ--GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R+I     G+ +L + L+    L   F  A+E + + +GRVV+ G+GKSGHIG K+A+TL
Sbjct: 15  RTIATAADGIHALAACLEENAALRRSFVDAIELVASKRGRVVVAGVGKSGHIGRKIAATL 74

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+RF++P+I++TS
Sbjct: 75  ASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAKRFNVPVISVTS 134

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A ++ I + LPK PE+CPHGLAPTTSAI+QLA+GDA AIALLE R FS  DF  
Sbjct: 135 NADSTIARNSTIPVILPKVPEACPHGLAPTTSAILQLAVGDAFAIALLERRGFSAEDFKT 194

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V VV    +L G+
Sbjct: 195 FHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSCKGFGVVGVVGGDGELVGV 254

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+VL +VDD  + 
Sbjct: 255 ITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKITVLFLVDDVGRP 314

Query: 327 IGIVHFLDLLRFGI 340
            GI+H  DLLR G+
Sbjct: 315 SGILHVHDLLRAGV 328


>gi|315499285|ref|YP_004088089.1| kpsf/gutq family protein [Asticcacaulis excentricus CB 48]
 gi|315417297|gb|ADU13938.1| KpsF/GutQ family protein [Asticcacaulis excentricus CB 48]
          Length = 332

 Score =  298 bits (763), Expect = 8e-79,   Method: Compositional matrix adjust.
 Identities = 147/310 (47%), Positives = 206/310 (66%), Gaps = 4/310 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKI---KAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           E  GL ++  +L GEL  +F  A+  I   ++  GR+++TG+GKSGHIG K+A++LASTG
Sbjct: 23  ETAGLQAMRDALDGELGKRFEGAISTILDAQSKGGRIIVTGMGKSGHIGRKIAASLASTG 82

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             S FVH AEASHGDLGM+  DD+++ LSWSG + EL  I+ Y RRFS+PLIAITS  KS
Sbjct: 83  ALSHFVHPAEASHGDLGMVGGDDVVLALSWSGEAPELADIIAYTRRFSVPLIAITSGPKS 142

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   ADI L LPK  E+CP+GLAPTTS  MQLA+GD + +ALL  R F+  DF   HPG
Sbjct: 143 ALGSAADIALVLPKMAEACPNGLAPTTSTTMQLAMGDCITVALLSLRKFTAQDFRQFHPG 202

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG+  +   D+MHSGD++PLV     L +AI  +S KR+G   +VD G +L GI+T+G
Sbjct: 203 GKLGSRLLKVGDLMHSGDAMPLVSDRSLLSEAIVEISSKRYGMTGIVDAGGRLIGIVTDG 262

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ R F +  N   V ++M + P+V   DTL +  +  +   +I+ L  V+  +K +G++
Sbjct: 263 DLRRAFSEGFNDRPVSEIMTRAPRVTTPDTLASQLLAEMNARSITGLFAVEK-EKPVGVI 321

Query: 331 HFLDLLRFGI 340
           H  ++LR G+
Sbjct: 322 HLHEILRAGV 331


>gi|288956946|ref|YP_003447287.1| arabinose-5-phosphate isomerase [Azospirillum sp. B510]
 gi|288909254|dbj|BAI70743.1| arabinose-5-phosphate isomerase [Azospirillum sp. B510]
          Length = 338

 Score =  297 bits (761), Expect = 1e-78,   Method: Compositional matrix adjust.
 Identities = 150/323 (46%), Positives = 205/323 (63%), Gaps = 5/323 (1%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S ++N  + CA+R +  E   L +L  SL GE    F  A++ ++ I+GRVV+TG+GKSG
Sbjct: 19  SPVENRDLACAVRVLRTEADALVALAGSLDGE----FLRALDILQGIEGRVVVTGMGKSG 74

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+  K+A+T+ASTGTP+ FVH  EASHGDLGMI R D ++ LS SG + EL  I+ Y RR
Sbjct: 75  HVARKIAATMASTGTPALFVHPGEASHGDLGMIARIDAVVALSNSGETHELADIIAYTRR 134

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F IPLI +T    S +A  +D+ L +P EPE+CP GLAPTTS  M LA+GDALA+ALLE 
Sbjct: 135 FGIPLIGMTRRAASSLAEQSDVALVIPPEPEACPLGLAPTTSTTMMLALGDALAVALLER 194

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R FS  DF   HPGG+LG   +  +D+MH GD +PL ++  PL D I  ++ KR GCV V
Sbjct: 195 RGFSAADFREFHPGGQLGRALLKVTDIMHKGDDLPLCRLDSPLSDVIFEMTAKRLGCVGV 254

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            DE   L GIIT+GD+ R+   ++     + +M   PK I    L+  A++ +    I+ 
Sbjct: 255 TDEAGALVGIITDGDLRRHLKPEILAERADSIMSPRPKTIRPKALIVEALREMNDKKITT 314

Query: 317 LMVVDDCQKAIGIVHFLDLLRFG 339
           L V+ +  + +GIVH  D LR G
Sbjct: 315 LFVI-EADRPLGIVHIHDCLRAG 336


>gi|8571424|gb|AAF76879.1|AF247711_1 capsule expression protein [Sinorhizobium meliloti]
          Length = 359

 Score =  288 bits (738), Expect = 6e-76,   Method: Compositional matrix adjust.
 Identities = 139/288 (48%), Positives = 194/288 (67%), Gaps = 2/288 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           R++     G+ +L   L  +  F      AVE +    GRVV++G+GKSGHIG K+A+TL
Sbjct: 23  RTLTTATNGIKALADHLTSDQDFAGALVDAVELMGDGDGRVVVSGVGKSGHIGRKIAATL 82

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +P+++I S
Sbjct: 83  ASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKVPIVSICS 142

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE R FS  DF  
Sbjct: 143 NRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLERRGFSAEDFKT 202

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V + DE  KL G+
Sbjct: 203 FHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIEMSAKGFGVVGITDESGKLIGV 262

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           IT+GD+ R+   DL    V++VM +NP+VI  D L + AM+ ++ H +
Sbjct: 263 ITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAAMEFMQDHKV 310


>gi|83313032|ref|YP_423296.1| phosphosugar isomerase [Magnetospirillum magneticum AMB-1]
 gi|82947873|dbj|BAE52737.1| Hypothetical phosphosugar isomerase AQ_1546 [Magnetospirillum
           magneticum AMB-1]
          Length = 321

 Score =  288 bits (737), Expect = 9e-76,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 201/314 (64%), Gaps = 4/314 (1%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R +  E R L SL +SL G     F  AV  I+   GRV++TG+GKSGH+  K+A+T+
Sbjct: 11  ARRVLDTEARALDSLAASLDG----PFLQAVTLIERAPGRVIVTGMGKSGHVARKIAATM 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTG P+F+VH AEASHGDLGM+TRDD ++ LS SG + EL  I+ Y RRF I LI ITS
Sbjct: 67  ASTGCPAFYVHPAEASHGDLGMVTRDDAVVALSNSGETPELGDIIAYTRRFEIGLIGITS 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
            + S +A  +D+ L LP  PE+CP GLAPTTS  M LA+GDALA+ LLE + F+  DF V
Sbjct: 127 RHGSTLATASDVALVLPANPEACPMGLAPTTSTTMMLALGDALAVTLLERKGFTAADFKV 186

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +D+MH GD +PLV     + + + +++ K  GC  VV    +L GI
Sbjct: 187 FHPGGQLGQRLLKVADLMHGGDGLPLVGAEAKMAEVLLVMTAKSLGCAGVVTPDGRLAGI 246

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T+GD+ R+   DL T    +VM  +P+ +  + L   A++ + + +I+ L VV+   + 
Sbjct: 247 LTDGDLRRHMSPDLLTAKAAEVMTASPRTVPPNLLAAEALRQMNERSITSLFVVEGDGRP 306

Query: 327 IGIVHFLDLLRFGI 340
           +G++H  D LR G+
Sbjct: 307 VGVLHVHDCLRAGL 320


>gi|170750715|ref|YP_001756975.1| KpsF/GutQ family protein [Methylobacterium radiotolerans JCM 2831]
 gi|170657237|gb|ACB26292.1| KpsF/GutQ family protein [Methylobacterium radiotolerans JCM 2831]
          Length = 341

 Score =  286 bits (731), Expect = 5e-75,   Method: Compositional matrix adjust.
 Identities = 145/320 (45%), Positives = 202/320 (63%), Gaps = 1/320 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T    +RS+      L     + QG L   F  AV+ I   KGRV+++GIGKSGH+G K
Sbjct: 23  TTRDLGIRSLQLGIAALQEASVAFQGRLGAAFEEAVQTILQSKGRVIVSGIGKSGHVGRK 82

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT +FFVH  EASHGDLGMI RDD+II LSWSG + EL  ++ ++RRFSIPL
Sbjct: 83  IAATLASTGTHAFFVHPTEASHGDLGMIARDDVIIALSWSGETAELSDLVGFSRRFSIPL 142

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +AIT   +S +   AD++L LP+  ESCPH LAPT+S+++QLA+GDALA+ALLE R F+ 
Sbjct: 143 VAITRNGESTLGKAADVLLELPRVRESCPHDLAPTSSSLIQLALGDALAVALLERRGFTS 202

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F+ LHPGG L         VMH    +PLV     + + +  ++ +R+GCV V D   
Sbjct: 203 ARFHTLHPGGTLAARLRTVQQVMHGPQDMPLVHETALMSEVLIEIAARRYGCVGVTDAAG 262

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GD+ R+    L    V  VM ++P  +    L   A++L+ +  I+ +  V 
Sbjct: 263 RLVGIVTDGDLRRHMGPALLDTPVSTVMTRDPVTVEPHKLAQAALELMNRRLITAVFAVT 322

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  + +GIVH  DLLR GI+
Sbjct: 323 DG-RPVGIVHVHDLLRVGIV 341


>gi|239787679|emb|CAX84187.1| Sugar phosphate Isomerase [uncultured bacterium]
          Length = 325

 Score =  284 bits (727), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 142/317 (44%), Positives = 203/317 (64%), Gaps = 5/317 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R +  E   L SL   L       F  A++ + A++GRVV++G+GKSGH+G K+A
Sbjct: 13  LESARRVLALEAEALQSLALGLD----QAFVRALDLLGAVEGRVVVSGMGKSGHVGRKIA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ++LASTGTP+ FVH AEASHGDLGMIT  D ++ LS SG + EL  ++ Y RRF+IPL+ 
Sbjct: 69  ASLASTGTPAVFVHPAEASHGDLGMITPKDAVLALSNSGETAELSDLIAYTRRFAIPLVG 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   S ++  AD+ L LP + E+CP GLAPTTS  M L +GDALA+ LLE R F+  D
Sbjct: 129 ITSRANSTLSEAADVALVLPLKTEACPMGLAPTTSTTMMLGLGDALAVTLLERRGFTAAD 188

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F +LHPGG LG   +  +D+MH GD +PLV    P+ + + +++ KRFGC  VV    +L
Sbjct: 189 FQMLHPGGSLGRRLLKVADLMHGGDEVPLVAPAQPMAETLLVMTNKRFGCAGVVGPDGRL 248

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ R+    +   + ++VM  +PK +    L   A++++    I+ L VVDD 
Sbjct: 249 MGIVTDGDLRRHMADSMLARTAKEVMTLSPKTVRPQMLAAEALRIMNTSAITTLFVVDD- 307

Query: 324 QKAIGIVHFLDLLRFGI 340
            K +GI+H  D LR G+
Sbjct: 308 GKPVGILHIHDCLRAGV 324


>gi|209542516|ref|YP_002274745.1| KpsF/GutQ family protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530193|gb|ACI50130.1| KpsF/GutQ family protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 353

 Score =  282 bits (721), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 144/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  AV+    + GRV++TGIGKSGH+G K+ STLASTGTPS FVH +EASHGDLGM
Sbjct: 59  LGTAFARAVDAFSTLAGRVIVTGIGKSGHVGRKIQSTLASTGTPSVFVHPSEASHGDLGM 118

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I R D ++ LS SG + EL  I+ +ARR+ + L AIT+   S +A  ADI L +PK PE+
Sbjct: 119 IQRGDAVLALSNSGETAELADIVAHARRYGLLLAAITAAPDSTLARAADIALIVPKAPEA 178

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CP GLAPTTS  MQ+A+GDALA+ LLE RNFS  DF V HPGG+LGT     SD+MH G 
Sbjct: 179 CPMGLAPTTSTTMQMALGDALAVVLLERRNFSATDFGVFHPGGRLGTRLRRVSDLMHRGA 238

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++PL      +   I  ++ K FGC+ VV    +L+G+IT+GD+ R   +DL++    D+
Sbjct: 239 AMPLGTPDIAMRQVIMEMTRKAFGCIGVVSPDGRLRGLITDGDLRRALDRDLDSTLAADI 298

Query: 289 MIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M   P     D L   A++L+  R   I+ L VVD     +GI+H  DLLR G+
Sbjct: 299 MNPTPLTTGPDVLAAEALRLMNARARPITSLFVVDAAGLPVGILHIHDLLRAGV 352


>gi|162147899|ref|YP_001602360.1| arabinose 5-phosphate isomerase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786476|emb|CAP56058.1| putative arabinose 5-phosphate isomerase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score =  281 bits (720), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 144/294 (48%), Positives = 189/294 (64%), Gaps = 2/294 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  AV+    + GRV++TGIGKSGH+G K+ STLASTGTPS FVH +EASHGDLGM
Sbjct: 59  LGTAFARAVDAFSTLAGRVIVTGIGKSGHVGRKIQSTLASTGTPSVFVHPSEASHGDLGM 118

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I R D ++ LS SG + EL  I+ +ARR+ + L AIT+   S +A  ADI L +PK PE+
Sbjct: 119 IQRGDAVLALSNSGETAELADIVAHARRYGLLLAAITATPDSTLARAADIALIVPKAPEA 178

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CP GLAPTTS  MQ+A+GDALA+ LLE RNFS  DF V HPGG+LGT     SD+MH G 
Sbjct: 179 CPMGLAPTTSTTMQMALGDALAVVLLERRNFSATDFGVFHPGGRLGTRLRRVSDLMHRGA 238

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++PL      +   I  ++ K FGC+ VV    +L+G+IT+GD+ R   +DL++    D+
Sbjct: 239 AMPLGTPDIAMRQVIMEMTRKAFGCIGVVAPDGRLRGLITDGDLRRALDRDLDSTLAADI 298

Query: 289 MIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M   P     D L   A++L+  R   I+ L VVD     +GI+H  DLLR G+
Sbjct: 299 MNPTPLTTGPDVLAAEALRLMNARARPITSLFVVDAAGLPVGILHIHDLLRAGV 352


>gi|114327364|ref|YP_744521.1| arabinose-5-phosphate isomerase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315538|gb|ABI61598.1| arabinose-5-phosphate isomerase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 352

 Score =  281 bits (719), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 144/309 (46%), Positives = 193/309 (62%), Gaps = 13/309 (4%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L  QF  AVE I A  GRVV++GIGKSGH+G K+A+TL+STGTP+ FVH AEASHG
Sbjct: 43  LADALDEQFLHAVEMIAASTGRVVVSGIGKSGHVGRKMAATLSSTGTPALFVHPAEASHG 102

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   D+++ LS SG + EL  ++ + RRF +PLI +T  + S +A  ADIVL LP 
Sbjct: 103 DLGMIVNGDIVLALSNSGETSELADLVAHTRRFGLPLIGVTGRSGSALARAADIVLLLPP 162

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+CP GLAPTTS  +Q+A+GDALA+ALL+ R F+  DF   HPGG+LG       D+M
Sbjct: 163 VAEACPMGLAPTTSTTLQMALGDALAVALLKRRGFTARDFGAFHPGGRLGAQLRTVGDIM 222

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            SGD +PLV     + +A+ ++S K  GCV VVD+  +L GI+T+GD+ R+   DL    
Sbjct: 223 RSGDDMPLVLPDMRMDEAVLLISSKSLGCVGVVDKEGRLIGIVTDGDLRRHMAPDLWQRP 282

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLL-------------RQHNISVLMVVDDCQKAIGIVH 331
           V D+M ++P+ I    L   A+  +                 I+ L VVD+    IG+VH
Sbjct: 283 VADIMTRDPRTIAPSVLAAEALHTMTGPAGKGLQNSGQTARPINTLFVVDETHTPIGVVH 342

Query: 332 FLDLLRFGI 340
             DLLR G+
Sbjct: 343 IHDLLRAGV 351


>gi|330993408|ref|ZP_08317343.1| Putative phosphosugar isomerase [Gluconacetobacter sp. SXCC-1]
 gi|329759438|gb|EGG75947.1| Putative phosphosugar isomerase [Gluconacetobacter sp. SXCC-1]
          Length = 351

 Score =  281 bits (718), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 151/316 (47%), Positives = 205/316 (64%), Gaps = 9/316 (2%)

Query: 34  EKRGLSSLESSLQ-----GE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           E  GL ++ ++L+     GE  L   F  AVE+I +   RVV+TGIGKSGHIG K+ +TL
Sbjct: 35  ESAGLQAMITALEAPPRPGEAGLGQAFIQAVERILSDNMRVVVTGIGKSGHIGRKIQATL 94

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+ FVH AEASHGDLGM+ + D ++ +S SG + E+  ++ +ARRF + LIA+TS
Sbjct: 95  ASTGTPAIFVHPAEASHGDLGMLQKGDAVLAISNSGETAEMADVISHARRFGMLLIAMTS 154

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  ADIVL LP+ PE+CP+GLAPTTS+ MQLA+GDALAI LL+ R FS +DF V
Sbjct: 155 CAHSTLARTADIVLLLPRAPEACPNGLAPTTSSTMQLALGDALAIVLLQRRGFSASDFGV 214

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LGT      ++MH G S+PL     PL   I  ++ K FGC+ VVD   +L G+
Sbjct: 215 FHPGGRLGTQLRRVRELMHPGPSMPLGTPDTPLRQVIMEMTRKAFGCMGVVDANNRLVGL 274

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQ 324
           IT+ D+      DL+     D+M   P+ I  D L   A++++  R   IS + V++D  
Sbjct: 275 ITDRDLRLALELDLDHTRAADIMNTQPQTIGSDVLAAEALRIMNDRPRPISSIFVLNDTD 334

Query: 325 KAIGIVHFLDLLRFGI 340
           + +GIVH  DLLR GI
Sbjct: 335 QPVGIVHLHDLLRAGI 350


>gi|149202042|ref|ZP_01879015.1| KpsF/GutQ family protein [Roseovarius sp. TM1035]
 gi|149144140|gb|EDM32171.1| KpsF/GutQ family protein [Roseovarius sp. TM1035]
          Length = 327

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 137/298 (45%), Positives = 198/298 (66%), Gaps = 2/298 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L  +L   F   V ++  +KGRV+++G+GKSGHI +K+A+T+ASTGTP+ +VH  EAS
Sbjct: 31  SALHADLPIDFDAVVTRLLEVKGRVIVSGMGKSGHIAAKIAATMASTGTPAQYVHPGEAS 90

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMITR+D +I++S SG + EL  I+ ++RRF+IPLIAIT +  S +   AD  LTL
Sbjct: 91  HGDLGMITREDALILISNSGETRELADIIAHSRRFAIPLIAITKKPDSTLGQQADFRLTL 150

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           P  PE+C  G+APTTS    LA+GDALA+A++  R F   +F   HPGG LG   +  S 
Sbjct: 151 PNAPEACAIGMAPTTSTTCTLALGDALAVAMMRLRGFERENFLAFHPGGTLGAQLLRVSS 210

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           VMHSG ++P+V    P+ + +  ++ K FG  AVV+EG +L  +IT+GD+ RN   DL  
Sbjct: 211 VMHSGAALPVVSAETPMGETLIEMTAKGFGVAAVVEEG-RLMAVITDGDLRRNL-SDLMA 268

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +V  +NP+ IL + LL+ A+ ++  H IS L  VD+  +  G+VH  D+LR G+
Sbjct: 269 RTAGEVATRNPRSILPEALLSEALGVMNTHKISALFAVDESGQLRGLVHIHDILRAGV 326


>gi|329114439|ref|ZP_08243201.1| Putative phosphosugar isomerase [Acetobacter pomorum DM001]
 gi|326696515|gb|EGE48194.1| Putative phosphosugar isomerase [Acetobacter pomorum DM001]
          Length = 337

 Score =  280 bits (717), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 145/311 (46%), Positives = 197/311 (63%), Gaps = 4/311 (1%)

Query: 34  EKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           E+ GL +L  +L+    L   F  AVE I A+ GRVV+TGIGKSGHI  K+ +TLASTGT
Sbjct: 26  ERAGLDALAEALENPVGLGGAFAEAVEIILALPGRVVVTGIGKSGHIARKVQATLASTGT 85

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P+ FVH AEASHGDLGM+ + D ++  S SG + EL  I  +ARR  +PL+A+TS   S 
Sbjct: 86  PAIFVHPAEASHGDLGMVQKGDAVLAFSNSGETTELGDIAAHARRSGLPLLAVTSRAHST 145

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A  A + LTLP  PESCP GLAPTTS + QLA GDALA+ALL  R F+  DF   HPGG
Sbjct: 146 LASAATVALTLPSLPESCPMGLAPTTSTLTQLAFGDALAVALLRQRGFTATDFGTYHPGG 205

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +LG       ++M + +++PL     P+ D I  ++ K  GCVA++ +   L G+IT+GD
Sbjct: 206 RLGARLRTVRELMRTDNAMPLATPNTPMRDVIVEMTHKALGCVAILGQNGTLAGLITDGD 265

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGI 329
           + R    DL T   +DVM  +P  I      + A++L+  R+  I+ L V+DD +K IG+
Sbjct: 266 LRRALDHDLTTTLAKDVMNDSPLTIGPGIFASEALRLMNERKRPITSLFVLDDDRKPIGV 325

Query: 330 VHFLDLLRFGI 340
           VH  DL+R G+
Sbjct: 326 VHVHDLIRAGV 336


>gi|259414964|ref|ZP_05738887.1| arabinose 5-phosphate isomerase [Silicibacter sp. TrichCH4B]
 gi|259349415|gb|EEW61162.1| arabinose 5-phosphate isomerase [Silicibacter sp. TrichCH4B]
          Length = 323

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/285 (49%), Positives = 195/285 (68%), Gaps = 2/285 (0%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVE ++A++GRV+++G+GKSGHIG+K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ 
Sbjct: 40  AVEILEAMEGRVIVSGVGKSGHIGNKIAATLASTGTPAQFVHATEASHGDLGMVTPRDVC 99

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +V+S SG + EL  I+ Y+RRF+IPLIAIT +  S +A  AD+VL LP  PE+C  G+AP
Sbjct: 100 LVISNSGETSELADIVTYSRRFAIPLIAITRKADSTLATQADVVLLLPDAPEACGIGMAP 159

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           TTS    LA+GDALA+AL++ R F   DF V HPGGKLG   +    +MH+G+++PLV  
Sbjct: 160 TTSTTATLAMGDALAVALMKRRGFEREDFKVFHPGGKLGAQLMLVDGLMHTGEALPLVAP 219

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
             P+ +A+  ++ K FG   +V EG +L GIIT+GD+ RN    L   S  +V  + PKV
Sbjct: 220 DTPMSEALLTMTAKGFGLAGLV-EGGRLTGIITDGDLRRNM-DGLMARSAGEVATRGPKV 277

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I   +L + A+  +    IS L V+DD  +  G++H  D LR G+
Sbjct: 278 IRRGSLASEALHEMNSRKISALFVLDDEDRVAGLLHIHDCLRAGL 322


>gi|258541779|ref|YP_003187212.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256632857|dbj|BAH98832.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635914|dbj|BAI01883.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638969|dbj|BAI04931.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642023|dbj|BAI07978.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645078|dbj|BAI11026.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648133|dbj|BAI14074.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651186|dbj|BAI17120.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654177|dbj|BAI20104.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 337

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 144/311 (46%), Positives = 197/311 (63%), Gaps = 4/311 (1%)

Query: 34  EKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           E+ GL +L  +L+    L   F  A+E I A+ GRVV+TGIGKSGHI  K+ +TLASTGT
Sbjct: 26  ERAGLDALAEALENPVGLGGAFAEAIEIILALPGRVVVTGIGKSGHIARKVQATLASTGT 85

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P+ FVH AEASHGDLGM+ + D ++  S SG + EL  I  +ARR  +PL+A+TS   S 
Sbjct: 86  PAIFVHPAEASHGDLGMVQKGDAVLAFSNSGETTELGDIAAHARRTGLPLLAVTSRAHST 145

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A  A + LTLP  PESCP GLAPTTS + QLA GDALA+ALL  R F+  DF   HPGG
Sbjct: 146 LASAATVALTLPSLPESCPMGLAPTTSTLTQLAFGDALAVALLRQRGFTATDFGTYHPGG 205

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +LG       ++M + +++PL     P+ D I  ++ K  GCVA++ E   L G+IT+GD
Sbjct: 206 RLGARLRTVRELMRTDNAMPLATPNTPMRDVIVEMTHKALGCVAILGENGTLAGLITDGD 265

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGI 329
           + R    DL T   +DVM  +P  I      + A++L+  R+  I+ L V+DD +K +G+
Sbjct: 266 LRRALDHDLTTTLAKDVMNDSPLTIGPGIFASEALRLMNERKRPITSLFVLDDERKPLGV 325

Query: 330 VHFLDLLRFGI 340
           VH  DL+R G+
Sbjct: 326 VHVHDLIRAGV 336


>gi|99077987|ref|YP_611246.1| KpsF/GutQ family protein [Ruegeria sp. TM1040]
 gi|99034930|gb|ABF61984.1| KpsF/GutQ family protein [Ruegeria sp. TM1040]
          Length = 323

 Score =  280 bits (716), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 140/285 (49%), Positives = 196/285 (68%), Gaps = 2/285 (0%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVE ++A++GRV+++G+GKSGHIG+K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ 
Sbjct: 40  AVEILEAMEGRVIVSGVGKSGHIGNKIAATLASTGTPAQFVHATEASHGDLGMVTPRDVC 99

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +V+S SG + EL  I+ Y+RRF+IPLIAIT +  S +A  AD+VL LP  PE+C  G+AP
Sbjct: 100 LVISNSGETSELADIVTYSRRFAIPLIAITRKADSTLATQADVVLLLPDAPEACGIGMAP 159

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           TTS    LA+GDALA+AL++ R F   DF V HPGGKLG   +    +MH+G+++PLV  
Sbjct: 160 TTSTTATLAMGDALAVALMKRRGFEREDFKVFHPGGKLGAQLMLVDGLMHTGEALPLVAP 219

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
             P+ +A+ I++ K FG   +V EG +L GIIT+GD+ RN    L   S  +V  + PKV
Sbjct: 220 ETPMTEALLIMTAKGFGLAGLV-EGGRLTGIITDGDLRRNM-DGLMARSAGEVATRGPKV 277

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I   +L + A+  +    IS L V+D+  +  G++H  D LR G+
Sbjct: 278 IRRGSLASEALHDMNSRKISALFVLDNEDRVAGLLHIHDCLRAGL 322


>gi|329847848|ref|ZP_08262876.1| arabinose 5-phosphate isomerase [Asticcacaulis biprosthecum C19]
 gi|328842911|gb|EGF92480.1| arabinose 5-phosphate isomerase [Asticcacaulis biprosthecum C19]
          Length = 328

 Score =  280 bits (715), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 147/295 (49%), Positives = 191/295 (64%), Gaps = 4/295 (1%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           G L   F  AVE I A  GRV+++G+GKSGHI  K+A+TLASTGTPSFFVH AEASHGDL
Sbjct: 36  GSLDENFVRAVELIHACTGRVILSGMGKSGHIARKIAATLASTGTPSFFVHPAEASHGDL 95

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GMIT DD+ IVLS SG + EL  IL + RRF IPLI + S   S +   AD+ L LP  P
Sbjct: 96  GMITPDDICIVLSNSGETSELSDILGHTRRFGIPLIGVASRPGSTLLTTADVPLLLPNAP 155

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
           E+C  G+APTTS  M LA+GDALA+A++E + F   DF V HPGGKLG   +  S +MH 
Sbjct: 156 EACAIGMAPTTSTTMTLALGDALAVAVMEKKGFQPTDFKVFHPGGKLGAQLLTVSALMHK 215

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSV 285
           GD +PL+  G P+ +A+ +++ K FG V V + G  L GIIT+GD+ R  H D L T   
Sbjct: 216 GDDLPLIGEGAPMSEALLVMTAKSFGVVGVCN-GGALTGIITDGDLRR--HMDGLMTKRA 272

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            DVM + P+ I    L   A+ ++    I+ L VVD+ +  +G++H  D LR G+
Sbjct: 273 ADVMHRGPRTIAAGHLAVEALGVMNDRKITCLFVVDETKTPVGLIHIHDCLRAGV 327


>gi|148260667|ref|YP_001234794.1| KpsF/GutQ family protein [Acidiphilium cryptum JF-5]
 gi|326403861|ref|YP_004283943.1| KpsF/GutQ family protein [Acidiphilium multivorum AIU301]
 gi|146402348|gb|ABQ30875.1| KpsF/GutQ family protein [Acidiphilium cryptum JF-5]
 gi|325050723|dbj|BAJ81061.1| KpsF/GutQ family protein [Acidiphilium multivorum AIU301]
          Length = 340

 Score =  277 bits (709), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 139/290 (47%), Positives = 192/290 (66%), Gaps = 2/290 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV  +  I GRVV+TG+GKSGH+  K+A+TLASTGTP+ FVH AEASHGDLGMI   
Sbjct: 50  FTAAVTTLADIAGRVVVTGMGKSGHVARKIAATLASTGTPALFVHPAEASHGDLGMIVPG 109

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D +I LS SG + EL AI+ + RRF++PL+AITS  +S +A  AD+VL LP  PE+ P G
Sbjct: 110 DAVIALSNSGEAAELAAIVSHVRRFALPLVAITSRAESTLARAADLVLLLPAAPEAGPIG 169

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +APTTS  MQ+A+GDA+A+ALL  R F+  DF + HPGGKLG       D+MH G+++PL
Sbjct: 170 MAPTTSTTMQMALGDAIAVALLARRGFTAADFGLFHPGGKLGARLRRVRDLMHEGEAVPL 229

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
                 +  AI +++ K FGC+ ++D  ++L G++T+GD+ R    DL T  V  +M  +
Sbjct: 230 AGPDTRMDQAILLITAKHFGCLGIIDGERRLLGVVTDGDLRRAMAPDLLTREVGRIMTTS 289

Query: 293 PKVILEDTLLTVAMQLLRQHNISV--LMVVDDCQKAIGIVHFLDLLRFGI 340
           P+VI  + L   A+  +      V  L VVD+ ++ +GIVH  DLLR G+
Sbjct: 290 PRVIGPERLAEEALHDMTALTPRVMSLFVVDESRRVLGIVHMHDLLRAGV 339


>gi|34498782|ref|NP_902997.1| KpsF/GutQ family protein [Chromobacterium violaceum ATCC 12472]
 gi|34104633|gb|AAQ60991.1| probable KpsF/GutQ family protein [Chromobacterium violaceum ATCC
           12472]
          Length = 311

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 151/313 (48%), Positives = 204/313 (65%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ E   LS+L   L GE    F  AVE I A +GRV++TG+GKSGH+G K+A+TLASTG
Sbjct: 2   LLTEAAALSTLAERLNGE----FLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+FFVH AEA+HGDLGMIT DD++I LS SG S E+ ++L   +     LIA+T  ++S
Sbjct: 58  TPAFFVHPAEAAHGDLGMITGDDVVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSES 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD++L    E E+CP  LAPTTS   Q+A+GDALA+ L+E+R F ++DF + HPG
Sbjct: 118 TLAQAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTLMEARGFGQSDFALSHPG 177

Query: 211 GKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG  L V   D+MH GD++P V  G PL DA+  +S+KR G V V D    L GI T+
Sbjct: 178 GSLGRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTD 237

Query: 270 GDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GD+ R   K  D+  L V++VM + P+ I  D L   A  L++QH I+ L+VVD   K  
Sbjct: 238 GDLRRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLA 297

Query: 328 GIVHFLDLLRFGI 340
           G++H  DLL  G+
Sbjct: 298 GVLHMHDLLHAGV 310


>gi|83591354|ref|YP_425106.1| KpsF/GutQ [Rhodospirillum rubrum ATCC 11170]
 gi|83574268|gb|ABC20819.1| KpsF/GutQ [Rhodospirillum rubrum ATCC 11170]
          Length = 366

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 134/276 (48%), Positives = 184/276 (66%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V+I+G+GKSGH+ +K+A+TLASTGTPSFFVH AEASHGDLGMI R D +I LS SG +
Sbjct: 90  GKVIISGMGKSGHVAAKIAATLASTGTPSFFVHPAEASHGDLGMIGRSDAVIALSNSGET 149

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ Y RR  IPLI+IT  + S ++  AD+ L LP   E+CPHGLAPTTS    +A
Sbjct: 150 PELADMVAYTRRMGIPLISITGRHPSALSDAADVALVLPALTEACPHGLAPTTSTTAMMA 209

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +GDALA+ALLE R F+ +DF + HPGG+LG   +  +D+MH  D +PLV    P+ +AI 
Sbjct: 210 LGDALAVALLERRGFTASDFRLFHPGGQLGRKLLKVADLMHGQDRLPLVGPATPMAEAIL 269

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
            +S K  GCV VVD   +L GIIT+GD+ R+   DL + +   VM   PK I   TL   
Sbjct: 270 EISSKSLGCVGVVDAAGRLAGIITDGDLRRHMGADLWSRTAGSVMTPTPKTIAPTTLAIE 329

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            ++++ +  I+ L  +D  ++ +G +H  D LR G+
Sbjct: 330 GLRIMNESAITGLFALDADKRPVGFLHLHDCLRAGL 365


>gi|85703488|ref|ZP_01034592.1| Sugar phosphate Isomerase [Roseovarius sp. 217]
 gi|85672416|gb|EAQ27273.1| Sugar phosphate Isomerase [Roseovarius sp. 217]
          Length = 327

 Score =  277 bits (708), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 141/330 (42%), Positives = 212/330 (64%), Gaps = 7/330 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           T K H+   + T     R +I  E   L+++ ++L  +    F   V ++  ++GRV+++
Sbjct: 3   TAKTHTEAHSETPSEIARDVIRIEAEALTAMGAALPSD----FDAVVARLLEVRGRVIVS 58

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHI +K+A+T+ASTGTP+ +VH  EASHGDLGMITR+D +I++S SG + EL  I
Sbjct: 59  GMGKSGHIAAKIAATMASTGTPAQYVHPGEASHGDLGMITREDAVILMSNSGETRELADI 118

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRF+IPLIAIT + +S +   AD +LTLP  PE+C  G+APTTS    LA+GDALA
Sbjct: 119 IAHCRRFAIPLIAITKKAESTLGQQADFLLTLPNAPEACAIGMAPTTSTTCTLALGDALA 178

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +A++  R F   +F   HPGG LG   +  S VMH GD++P+V+   P+ + +  ++ K 
Sbjct: 179 VAMMRLRGFERENFLAFHPGGTLGAQLLRVSSVMHRGDALPVVRESTPMGETLLEMTAKG 238

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FG  AVV++G +L  +IT+GD+ RN   DL   +  +V  +NP+ IL D LL+ A+ ++ 
Sbjct: 239 FGVAAVVEDG-RLLAVITDGDLRRNL-SDLMARTAGEVATRNPRSILPDALLSEALGVMN 296

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + IS L  VD+  +  G+VH  D LR G+
Sbjct: 297 TNKISALFAVDESGQLCGLVHIHDALRAGV 326


>gi|16126502|ref|NP_421066.1| sugar isomerase, KpsF/GutQ [Caulobacter crescentus CB15]
 gi|221235282|ref|YP_002517719.1| arabinose-5-phosphate isomerase [Caulobacter crescentus NA1000]
 gi|13423774|gb|AAK24234.1| sugar isomerase, KpsF/GutQ [Caulobacter crescentus CB15]
 gi|220964455|gb|ACL95811.1| arabinose-5-phosphate isomerase [Caulobacter crescentus NA1000]
          Length = 318

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 155/321 (48%), Positives = 202/321 (62%), Gaps = 8/321 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + VQ   R +  E   L  L  SL GE    F  AVE I   KGRVV TG+GKSGH+  K
Sbjct: 5   NAVQVGRRVLAVEADALRVLADSL-GE---AFANAVETIFNAKGRVVCTGMGKSGHVARK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT + FVH AEASHGDLGMI  DD+++ LS SG+  EL   L YA+RFSIPL
Sbjct: 61  IAATLASTGTQAMFVHPAEASHGDLGMIGPDDVVLALSKSGAGRELADTLAYAKRFSIPL 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+   S +    DI+L LP  PE      APTTS  +Q+A+GDA+A+ALLE R F+ 
Sbjct: 121 IAMTAVADSPLGQAGDILLLLPDAPEGTAEVNAPTTSTTLQIALGDAIAVALLERRGFTA 180

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +     D+MH  D +PLV     + DA+ ++SEKRFG V VVD   
Sbjct: 181 SDFRVFHPGGKLGAMLRTVGDLMHGADELPLVAADAAMPDALLVMSEKRFGAVGVVDNAG 240

Query: 262 KLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            L G+IT+GD+ R  H D L T +  +VM   P  I    L   A++++ +  I+VL VV
Sbjct: 241 HLAGLITDGDLRR--HMDGLLTHTAGEVMTHAPLTIGPGALAAEALKVMNERRITVLFVV 298

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +  ++ +GI+H  DLLR G+I
Sbjct: 299 ER-ERPVGILHVHDLLRAGVI 318


>gi|83859875|ref|ZP_00953395.1| sugar isomerase, KpsF/GutQ [Oceanicaulis alexandrii HTCC2633]
 gi|83852234|gb|EAP90088.1| sugar isomerase, KpsF/GutQ [Oceanicaulis alexandrii HTCC2633]
          Length = 329

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 199/314 (63%), Gaps = 6/314 (1%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++  E  GLS L  +L  E        V++I  +KGR++  G+GKSGH+  K+A+TLAS
Sbjct: 19  RTLSLEMSGLSQLSDALSEEAVR----VVKRIAGLKGRLICAGVGKSGHVARKIAATLAS 74

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+ +VH AEASHGDLGMIT DD ++ LS SG + EL  ++ Y RRF +PLI +T+  
Sbjct: 75  TGTPASYVHPAEASHGDLGMITADDAVLALSNSGETKELGDMIAYCRRFGVPLIGMTAGA 134

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  +DI+L  PK PE+C    APTTS  M +A GDALA+AL+E+R F+  DF   H
Sbjct: 135 ESTLAKGSDILLLCPKAPEACGETRAPTTSTTMMMAFGDALAVALIEARGFTATDFARFH 194

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG LG+      ++MH+GD++PL      + DA+ ++SEK FGCV V D   KL GI+T
Sbjct: 195 PGGALGSALARVDELMHAGDAMPLAPELASMGDALIVMSEKGFGCVGVTDGDGKLSGIVT 254

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--ISVLMVVDDCQKA 326
           +GD+ R    DL  LSV+ VM   P       L + A++++   N  I+ L V D+  K 
Sbjct: 255 DGDLRRRMGPDLIELSVKSVMTPGPITTTPGALASDALRVMTAGNRKITQLFVCDEAGKP 314

Query: 327 IGIVHFLDLLRFGI 340
           +G++H  DLLR G+
Sbjct: 315 VGLLHIHDLLRAGV 328


>gi|83941911|ref|ZP_00954373.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
 gi|83847731|gb|EAP85606.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
          Length = 320

 Score =  276 bits (707), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 145/324 (44%), Positives = 204/324 (62%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E + L  L  SL      +F  A++ + A +GRV++TGIGKSGHI
Sbjct: 1   MTTPFLDTARRVIRTEAQALEQLADSLDD----RFRQAIDLLVATRGRVIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGMIT DD+++ +S SG + EL  ++ Y+RRFS
Sbjct: 57  AKKIAATLASTGTPAQFVHPAEASHGDLGMITGDDVVLAISNSGEAPELANLIAYSRRFS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS  +S +    D+VL LP+  E+C  G+ P+TS  M LA+GDA+AIAL+E+R 
Sbjct: 117 IPLIGITSRAQSSLGAQCDVVLELPQLAEACGTGVVPSTSTTMTLAMGDAVAIALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH+GD++PLV++  P+ DA+  +S K FG V V D
Sbjct: 177 FTAEHFREFHPGGKLGARLSRVADLMHTGDALPLVQVDAPMSDALMAMSSKSFGVVIVTD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GIIT GD+ R+  + L + +  +VM   P  +  D L   A+ ++    I+ L+
Sbjct: 237 SNGALAGIITSGDLGRHL-EGLMSKTAREVMTPTPVTVAPDALAEKAVGIMNARKITCLL 295

Query: 319 VVDDCQKAI--GIVHFLDLLRFGI 340
           V+D  Q  +  G++H  D LR G+
Sbjct: 296 VLDPAQGDVPAGLLHIHDCLRVGL 319


>gi|330721730|gb|EGG99725.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC2047]
          Length = 326

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 147/320 (45%), Positives = 209/320 (65%), Gaps = 7/320 (2%)

Query: 29  RSIIAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +++IA  +    LE+    +L   +  QF  A + + A +GR+V+TG+GKSGHIGSK+A+
Sbjct: 7   KALIATGQRTIKLEAKCVEALAPRIDEQFSSACQLMLACEGRIVVTGMGKSGHIGSKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTG+P+FFVH  EASHGDLGMIT  D++I LS SG++ E+  IL   +R   PLI++
Sbjct: 67  TLASTGSPAFFVHPGEASHGDLGMITHKDVVIALSNSGTTAEILTILPLIKRMHAPLISM 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A +ADI L +    E+CPHGLAPT+S    LA+GDALAIA+LE+R FS  DF
Sbjct: 127 TGAPASTLAKNADIHLDVSVAEEACPHGLAPTSSTTAALAMGDALAIAMLEARGFSAEDF 186

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +   D+MHSG+ IPLVK   PL  A+ +++EK+ G  AV+D+  +L
Sbjct: 187 AISHPGGALGRRLLLKVEDIMHSGEQIPLVKQDTPLSQALLVVTEKKLGMTAVIDDDNRL 246

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R      D+ +  V +VM  + K I  D L   A+ ++ +  I+ L+V D
Sbjct: 247 QGIFTDGDLRRTLDNGIDIRSALVNEVMTAHCKTIRPDVLAAEALAVMEEDKINALIVTD 306

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  + IG ++  DLLR G+I
Sbjct: 307 DHNRPIGALNMHDLLRAGVI 326


>gi|83855387|ref|ZP_00948917.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
 gi|83843230|gb|EAP82397.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
          Length = 320

 Score =  276 bits (707), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 146/324 (45%), Positives = 203/324 (62%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E + L  L  SL      +F  A++ + A +GRV++TGIGKSGHI
Sbjct: 1   MTTPFLDTARRVIRTEAQALEQLADSLDD----RFRQAIDLLVATRGRVIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGMIT DD+++ +S SG + EL  ++ Y+RRFS
Sbjct: 57  AKKIAATLASTGTPAQFVHPAEASHGDLGMITGDDVVLAISNSGEAPELANLIAYSRRFS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS  +S +    D+VL LP+  E+C  G+ P+TS  M LA+GDA+AIAL+E+R 
Sbjct: 117 IPLIGITSRAQSSLGAQCDVVLELPQLSEACGTGVVPSTSTTMTLAMGDAVAIALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH+GD++PLV++  P+ DA+  +S K FG V V D
Sbjct: 177 FTAEHFREFHPGGKLGARLSRVADLMHTGDALPLVQVDAPMSDALMAMSSKSFGVVIVTD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GIIT GD+ R+    L + +  +VM   P  +  D L   A+ ++    I+ L+
Sbjct: 237 SNGALAGIITSGDLGRHL-DGLMSKTAREVMTPTPVTVAPDALAEKAVGIMNARKITCLL 295

Query: 319 VVDDCQKAI--GIVHFLDLLRFGI 340
           V+D  Q  I  G++H  D LR G+
Sbjct: 296 VLDPAQGDIPAGLLHIHDCLRVGL 319


>gi|295690283|ref|YP_003593976.1| KpsF/GutQ family protein [Caulobacter segnis ATCC 21756]
 gi|295432186|gb|ADG11358.1| KpsF/GutQ family protein [Caulobacter segnis ATCC 21756]
          Length = 318

 Score =  275 bits (704), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 148/314 (47%), Positives = 203/314 (64%), Gaps = 6/314 (1%)

Query: 32  IAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           IA  R + S+E+    +L   L   F  AVE +   KGR+V TGIGKSGH+  K+A+TLA
Sbjct: 7   IAVGRRVLSVEADALRTLSQSLDEAFVKAVETLFNAKGRIVCTGIGKSGHVARKIAATLA 66

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STG  + FVH AEASHGDLGMI  DD+I+ LS SG + EL   + YA+RFSIPLIA+T+ 
Sbjct: 67  STGAQAMFVHPAEASHGDLGMIGPDDVILALSKSGEARELSDTIAYAKRFSIPLIAMTAV 126

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +    DIVL LP  PE+     APTTS  +Q+A+GDA+A+ALLE R F+ +DF V 
Sbjct: 127 QDSQLGRGGDIVLRLPDSPEATAEVNAPTTSTTLQIALGDAIAVALLERRGFTASDFRVF 186

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGGKLG +    +D+MH  + +PL+    P+ DA+ ++SEKRFG V VVD   +L G+I
Sbjct: 187 HPGGKLGAMLRTVADLMHGDEELPLIGADAPMSDALLVMSEKRFGAVGVVDGSGRLAGLI 246

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T+GD+ R+    L   + E VM + P VI    L   A++++    I+VL VV + ++ +
Sbjct: 247 TDGDLRRHMDGLLQHTAGE-VMTRAPLVIAPGALAAEALKVMNDRRITVLFVV-EAERPV 304

Query: 328 GIVHFLDLLRFGII 341
           G++H  DLLR G+I
Sbjct: 305 GVLHVHDLLRAGVI 318


>gi|51039820|tpg|DAA00345.1| TPA_exp: KpsF-like [Caulobacter vibrioides]
          Length = 318

 Score =  275 bits (704), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 155/321 (48%), Positives = 201/321 (62%), Gaps = 8/321 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + VQ   R +  E   L  L  SL GE    F  AVE I   KGRVV TG+GKSGH+  K
Sbjct: 5   NAVQVGRRVLAVEADALRVLADSL-GE---AFANAVETIFNAKGRVVCTGMGKSGHVARK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT + FVH AEASHGDLGMI  DD+++ LS SG+  EL   L YA+RFSIPL
Sbjct: 61  IAATLASTGTQAMFVHPAEASHGDLGMIGPDDVVLALSKSGAGRELADTLAYAKRFSIPL 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+   S +    DI+L LP  PE      APTTS  +Q+A+GDA+A+ALLE R F+ 
Sbjct: 121 IAMTAVADSPLGQAGDILLLLPDAPEGTAEVNAPTTSTTLQIALGDAIAVALLERRGFTA 180

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +     D+MH  D +PLV     + DA+ ++SEKRFG V VVD   
Sbjct: 181 SDFRVFHPGGKLGAMLRTVGDLMHGADELPLVAADAAMPDALLVMSEKRFGAVGVVDNAG 240

Query: 262 KLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            L G+IT GD+ R  H D L T +  +VM   P  I    L   A++++ +  I+VL VV
Sbjct: 241 HLAGLITXGDLRR--HMDGLLTHTAGEVMTHAPLTIGPGALAAEALKVMNERRITVLFVV 298

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +  ++ +GI+H  DLLR G+I
Sbjct: 299 ER-ERPVGILHVHDLLRAGVI 318


>gi|254295534|ref|YP_003061556.1| KpsF/GutQ family protein [Hirschia baltica ATCC 49814]
 gi|254044065|gb|ACT60859.1| KpsF/GutQ family protein [Hirschia baltica ATCC 49814]
          Length = 324

 Score =  275 bits (703), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 207/312 (66%), Gaps = 5/312 (1%)

Query: 34  EKRGLSSLESSLQGE----LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           E +GL +L  +L  +    +S  F  A++ ++ ++GR++++G+GKSGHI +K+A+TLAST
Sbjct: 14  EIKGLEALVQALNVDSSAVISEAFPRAIKLMQNVEGRIIVSGMGKSGHIANKIAATLAST 73

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G PS FVH  EASHGDLGMI++ D+++ +S SG + EL  I+ Y RRF IPLIAITS   
Sbjct: 74  GAPSSFVHPGEASHGDLGMISQKDIVLAISNSGETKELADIIAYTRRFKIPLIAITSGAN 133

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A   D +L LP   E+C    APTTS  M LAIGDALA+ LL  + F E DF V HP
Sbjct: 134 SSLAKACDCLLLLPPAAEACGQTRAPTTSTTMTLAIGDALAVTLLTEKGFGETDFKVYHP 193

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GGKLG  F   SD++    ++PLV+ G    DA+ I+S+  FGCV V++    L+G+IT+
Sbjct: 194 GGKLGAAFRRVSDLVRDHANLPLVQSGSIAGDAVPIISQGGFGCVGVINSAGDLEGMITD 253

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           GD+ R+F K+ +T+ V+D+M K+P  I  D L   A++L+  + I+ L V++D +K IGI
Sbjct: 254 GDLRRHFGKNFSTVIVDDIMTKSPLTITNDMLAARALELISSNRITALFVLED-KKPIGI 312

Query: 330 VHFLDLLRFGII 341
           +H  D L  G+I
Sbjct: 313 LHVHDCLSDGVI 324


>gi|167645173|ref|YP_001682836.1| KpsF/GutQ family protein [Caulobacter sp. K31]
 gi|167347603|gb|ABZ70338.1| KpsF/GutQ family protein [Caulobacter sp. K31]
          Length = 323

 Score =  275 bits (703), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 150/314 (47%), Positives = 202/314 (64%), Gaps = 8/314 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R + AE   L+   ++L       F  AVE +   KGRVV TGIGKSGH+  K+A+TLAS
Sbjct: 17  RVLNAEAEALTQQSAALD----ESFVRAVEALFDAKGRVVCTGIGKSGHVARKIAATLAS 72

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG+P+ FVHAAEASHGDLGMI + D+++ LS SG + EL   L YA+RFSIPLIAIT+  
Sbjct: 73  TGSPAMFVHAAEASHGDLGMIGQGDVVLALSKSGEARELSDSLAYAKRFSIPLIAITAVA 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   ADI+L LP  PE+     APTTS  +Q+A+GDALA+ALLE R F+ +DF V H
Sbjct: 133 DSQLGRAADILLLLPDAPEATAEVNAPTTSTTLQMALGDALAVALLERRGFTASDFRVFH 192

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGGKLG +     D+MH  D +PL++    + + + ++SEKRFG V VV     L G+IT
Sbjct: 193 PGGKLGAMLRTVGDLMHGHDELPLIREAAAMSETLLVMSEKRFGAVGVVATDGTLSGLIT 252

Query: 269 EGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +GD+ R  H D L T +  +VM + P  I    L   A++L+ +  I+VL VV+   + +
Sbjct: 253 DGDLRR--HMDGLMTHTAGEVMTRAPLTIAPGALAAEALKLMNERRITVLFVVEQ-NRPV 309

Query: 328 GIVHFLDLLRFGII 341
           GI+H  DLLR G+I
Sbjct: 310 GILHVHDLLRAGVI 323


>gi|163745219|ref|ZP_02152579.1| arabinose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
 gi|161382037|gb|EDQ06446.1| arabinose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
          Length = 322

 Score =  274 bits (701), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 146/326 (44%), Positives = 207/326 (63%), Gaps = 9/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E   L  L  SL      +F  AV+ ++A KGR+++TGIGKSGHI
Sbjct: 1   MNTPFLDTARRVIRCESDALIQLADSLDD----RFRGAVDLMRACKGRIIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTP+ FVH AEASHGDLGMIT  D+++ +S SG + EL  ++ Y+RR++
Sbjct: 57  GNKIAATLASTGTPAQFVHPAEASHGDLGMITAADVVLAISNSGEAPELANLIAYSRRYA 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS   S +  H+D+VL LP+  E+C  G+ PTTS  + LA+GDA+A+AL+E+R 
Sbjct: 117 IPLIGITSRPDSSLGRHSDVVLELPRIAEACGTGVVPTTSTTLTLAMGDAVAVALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH GD++PLV    P+ DA++ +S K FG V VV+
Sbjct: 177 FTAEHFRDFHPGGKLGARLSRVADLMHVGDALPLVSADAPMADALSEISRKGFGVVCVVN 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   L+GIIT GD+ R+    L T++  +VM   P  I  D L   A+ ++    I+ L+
Sbjct: 237 DAGTLEGIITMGDLARHL-DGLMTMTAREVMTPAPVTISPDELAEKAVGVMNNRKITCLI 295

Query: 319 VVD----DCQKAIGIVHFLDLLRFGI 340
           V D    D +  +G++H  D LR G+
Sbjct: 296 VTDPAQNDGKSPVGLLHIHDCLRVGL 321


>gi|114571041|ref|YP_757721.1| KpsF/GutQ family protein [Maricaulis maris MCS10]
 gi|114341503|gb|ABI66783.1| KpsF/GutQ family protein [Maricaulis maris MCS10]
          Length = 322

 Score =  272 bits (696), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +VQ A R I  E+ G+ +LE S+    S  F   V +++ +KGR++  G+GKSGH+  K+
Sbjct: 6   SVQSARRVIAIEREGMDALEKSI----STDFANTVSRLRGVKGRLICAGVGKSGHVARKI 61

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TLASTGTP+++VH  EASHGDLGMI  DD ++ LS SG + EL  ++ Y RRF +PLI
Sbjct: 62  AATLASTGTPAYYVHPTEASHGDLGMIGTDDAVLALSKSGETRELGDLIAYCRRFGVPLI 121

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T++  S +    D +L +P+ PE+C    APTTS  + +A+GDALA+ALLE+R F+  
Sbjct: 122 AMTAQPDSSLGRAGDFLLAIPQAPEACGETRAPTTSTTLMMALGDALAVALLEARGFTAT 181

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG       D+MH+G+++PL+     + + +  ++ K FGC  +V    K
Sbjct: 182 DFKTFHPGGALGAALATVQDIMHAGNAVPLIGTDAQMSEVLIEMTTKSFGCAGIVGADGK 241

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--ISVLMVV 320
           L GIIT+GD+ R+    L      DVM   P+      L   A++L+      I+   +V
Sbjct: 242 LAGIITDGDLRRHMGAGLFDKRAGDVMTVGPRTGSASMLAADALRLMTAGTPKITQFFIV 301

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD ++ +GI+H  DLLR G+
Sbjct: 302 DDDERPVGILHLHDLLRVGL 321


>gi|254488502|ref|ZP_05101707.1| arabinose 5-phosphate isomerase [Roseobacter sp. GAI101]
 gi|214045371|gb|EEB86009.1| arabinose 5-phosphate isomerase [Roseobacter sp. GAI101]
          Length = 309

 Score =  272 bits (696), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 140/299 (46%), Positives = 195/299 (65%), Gaps = 3/299 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L  +F  A++ + A +GRV++TGIGKSGHI  K+A+TLASTGTP+ FVH AEASH
Sbjct: 11  ALADSLDDRFRQAIDLLIATRGRVIVTGIGKSGHIAKKIAATLASTGTPAQFVHPAEASH 70

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT DD+++ +S SG + EL  ++ Y+RRFSIPLI ITS   S +    D+VL LP
Sbjct: 71  GDLGMITGDDVVLAISNSGEAPELANLIAYSRRFSIPLIGITSREASSLGAQCDVVLLLP 130

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           + PE+C  G+ P+TS  M LA+GDA+AIAL+E+R+F+   F   HPGGKLG      +D+
Sbjct: 131 QLPEACGTGVVPSTSTTMTLAMGDAVAIALMENRSFTAEHFREFHPGGKLGARLSRVADL 190

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MH+GD++PLV++  P+ +A+  +S K FG V V D    L+GIIT GD+ R+    L+  
Sbjct: 191 MHTGDALPLVQVDAPMSEALMAMSSKSFGVVIVTDAAGTLQGIITSGDLGRHLDGLLSK- 249

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRFGI 340
           +  DVM   P  I  D L   A+ ++    I+ L+VV  D      G++H  D LR G+
Sbjct: 250 TARDVMTATPVSIAPDALAEKAVGIMNARKITCLLVVEPDGANIPEGLLHIHDCLRVGL 308


>gi|296115074|ref|ZP_06833716.1| KpsF/GutQ family protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295978411|gb|EFG85147.1| KpsF/GutQ family protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 353

 Score =  271 bits (694), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 143/295 (48%), Positives = 187/295 (63%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F   V+ +     RVV+TGIGKSGHIG K+ STLASTGTPS FVH AEASHGDLG
Sbjct: 58  DLGLAFIRTVKALSMPARRVVVTGIGKSGHIGRKIQSTLASTGTPSIFVHPAEASHGDLG 117

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+   D I+ LS SG + EL  I+ +ARRF + LIA+T+   S +A  ADI L LP+ PE
Sbjct: 118 MLQPGDAILALSNSGETSELADIVSHARRFGLLLIAMTARADSTLARAADIALVLPQTPE 177

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           +CP GLAPTTS+ MQLA+GDALAI LL  R F  +DF + HPGG+LG        +MH G
Sbjct: 178 ACPMGLAPTTSSTMQLALGDALAIVLLTQRGFGADDFGIFHPGGRLGAQLRDVRALMHVG 237

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
            S+PL     PL   I  ++ K FGC+ VV +   L G+IT+GD+ R   +D++     D
Sbjct: 238 PSMPLGSADLPLRQVIMEMTHKAFGCMGVVRDDGTLVGLITDGDLRRALEQDIDGTRAAD 297

Query: 288 VMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +M  NP+ I  D L   A++++  R   I+ L V+D  +  IGI+H  DLLR G+
Sbjct: 298 IMNTNPQTIRPDVLAVDALRIMNDRPRPITSLFVLDAERHPIGILHIHDLLRAGV 352


>gi|146278807|ref|YP_001168966.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145557048|gb|ABP71661.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 321

 Score =  271 bits (694), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 151/328 (46%), Positives = 203/328 (61%), Gaps = 12/328 (3%)

Query: 19  MKNSTVQ---CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           M +ST      A R I  E   LS L  SL GE    F  AVE I   +GRV+++G+GKS
Sbjct: 1   MTSSTTDFLATARRVIATEAEALSLLGDSL-GE---AFGEAVEMILRARGRVIVSGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + R
Sbjct: 57  GHIGRKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLI +    +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALAIAL+E
Sbjct: 117 RFDIPLIGVAGRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAIALME 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+   F V HPGGKLG      SD+MH   ++PLV  G P+ +A+  +S   FG + 
Sbjct: 177 HRQFTPEHFRVFHPGGKLGARLAKVSDLMHR--NLPLVDAGTPMGEALITMSRLGFGVLG 234

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V  +  +L+G+IT+GD+ R+    L  L V+DVM +NP+ I  D L   A+  +    I+
Sbjct: 235 VTGQDGRLEGVITDGDLRRHLDGLLG-LCVDDVMTRNPRTIAPDALAERAVAEMNARKIT 293

Query: 316 VLMVVD--DCQKAIGIVHFLDLLRFGII 341
            L VVD      A G++H  D LR G++
Sbjct: 294 SLFVVDPEGSGAAAGLIHIHDCLRAGVV 321


>gi|192362290|ref|YP_001983259.1| sugar isomerase, KpsF/GutQ family subfamily [Cellvibrio japonicus
           Ueda107]
 gi|190688455|gb|ACE86133.1| sugar isomerase, KpsF/GutQ family subfamily [Cellvibrio japonicus
           Ueda107]
          Length = 323

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/321 (45%), Positives = 212/321 (66%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           VQ A R+I  E   +++LE  + GE    F  A + I A KGRV++TG+GKSGHIG K+A
Sbjct: 7   VQSARRTIRLETEAIAALEERI-GE---DFRRACDLILAGKGRVIVTGMGKSGHIGKKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH  EASHGDLGMIT+DD+++ +S+SG+S+E+  +L   +R  I +I+
Sbjct: 63  ATLASTGTPAFFVHPGEASHGDLGMITKDDIVLAISYSGTSNEIVTLLPLLKRTGINIIS 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S++A  A++ L +    E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 123 MTGNPQSILAEVAEVHLNIYVATEACPLDLAPTSSTSATLVLGDALAIALLEARGFTAED 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +  SD+MH+GD IP V    PL++A+ ++S K FG   V D   +
Sbjct: 183 FAFSHPGGALGRKLLLRLSDIMHTGDEIPRVSSDTPLLEALMVISAKGFGMTTVTDATGQ 242

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             GI T+GD+ R+  +  D+++  V D+M  NPK++ + TL   A++L+ +  I+VL+V 
Sbjct: 243 FLGIYTDGDLRRSIDRGVDIHSAKVGDLMNPNPKILRDSTLAAEALKLMEESKINVLLVS 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +     IGIV   D+LR GII
Sbjct: 303 NAENHLIGIVKINDILRAGII 323


>gi|254452733|ref|ZP_05066170.1| arabinose 5-phosphate isomerase [Octadecabacter antarcticus 238]
 gi|198267139|gb|EDY91409.1| arabinose 5-phosphate isomerase [Octadecabacter antarcticus 238]
          Length = 322

 Score =  270 bits (691), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/317 (46%), Positives = 205/317 (64%), Gaps = 7/317 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R I AE   L +L  ++ G L+     AVE I   KGR++I+GIGKSGHI  K+A+TL
Sbjct: 11  ARRVIRAEADALMALADAIDGSLAD----AVELILNAKGRIIISGIGKSGHIARKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+ FVH AEASHGDLGM+TR D+++ +S SG + EL  ++ Y +RF+IPLI +TS
Sbjct: 67  ASTGTPAHFVHPAEASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGVTS 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A  +DIVL +PK PE+C  G+ PTTS  M LA+GDAL +A++E R F+ ++F  
Sbjct: 127 RAESSLASQSDIVLLMPKLPEACGTGVVPTTSTTMTLALGDALCVAIMEHRAFTPDNFRD 186

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG       D+MH  D+IPLV    P+ D +  +S+K FG V V+D    L GI
Sbjct: 187 FHPGGKLGAQLSRVGDLMHKDDAIPLVGEKTPMSDTLLTISQKGFGVVGVLDNNGYLAGI 246

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQ 324
           +T+GD+ RN    L+ L+  +VM + P  I   +L   A+ ++ +  I+ L VVD    +
Sbjct: 247 VTDGDLRRNMAGLLD-LTAGEVMTRAPGTIGPASLAEEAVNVMNERKITCLFVVDPNGSR 305

Query: 325 KAIGIVHFLDLLRFGII 341
           K +GI+H  D LR GI+
Sbjct: 306 KVVGILHIHDCLRAGIV 322


>gi|260431735|ref|ZP_05785706.1| arabinose 5-phosphate isomerase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415563|gb|EEX08822.1| arabinose 5-phosphate isomerase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 322

 Score =  270 bits (689), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 143/322 (44%), Positives = 200/322 (62%), Gaps = 7/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S ++ A + +  E R L  L   L      +F  AV  I   KGR++++GIGKSGHIG 
Sbjct: 5   ESFLKTARQVVTDEARALEVLAEGLD----ERFADAVRLILQAKGRLIVSGIGKSGHIGH 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP++FVH AEASHGDLGM+++DD+++ +S SG + EL  +L + RRF IP
Sbjct: 61  KIAATLASTGTPAYFVHPAEASHGDLGMVSKDDVVLAISNSGEAPELANLLAFTRRFGIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++S   S +   AD+ L +P   E+C +G+ P+ S  + LA+GDALAIAL++ R+F 
Sbjct: 121 LIGLSSRPDSTLMKQADVHLLIPALGEACGYGMVPSISTTLTLAMGDALAIALMKYRDFK 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGGKLG       D+MHSG+++PLV    P+ DA+  +S+K FG V V D  
Sbjct: 181 PEDFRAFHPGGKLGAQLSAVRDLMHSGNALPLVSADTPMSDALIEISQKGFGVVGVTDAN 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GIIT+GD+ R+    LN  + E VM  NP  I  D L   A+ ++    I+ L VV
Sbjct: 241 GALVGIITDGDLRRHMDGLLNNTAAE-VMTANPTTIAPDALAEEAVAIMNARKITSLFVV 299

Query: 321 DDCQ--KAIGIVHFLDLLRFGI 340
           D  Q  +A G++H  D LR G+
Sbjct: 300 DPDQPGRAQGLLHIHDCLRVGL 321


>gi|120555621|ref|YP_959972.1| KpsF/GutQ family protein [Marinobacter aquaeolei VT8]
 gi|120325470|gb|ABM19785.1| KpsF/GutQ family protein [Marinobacter aquaeolei VT8]
          Length = 329

 Score =  269 bits (687), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 149/320 (46%), Positives = 200/320 (62%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             ALR+I  E+  + +LES + G+    F  A E I A KGRVV+TG+GKSGHIG+K+A+
Sbjct: 14  NSALRAIRIEREAIEALESRINGD----FSRACEVIMACKGRVVVTGMGKSGHIGNKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLGMIT  D++I +S SGS+ E+  IL   +R   PLI++
Sbjct: 70  TLASTGTPAFFVHPGEASHGDLGMITPQDVVIAISNSGSTSEVVTILPLIKRMGAPLISM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  SV+A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R FS  DF
Sbjct: 130 TGKPDSVLAQEAVANLDVSVAIEACPLGLAPTSSTTATLVMGDALAVALLEARGFSAEDF 189

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L +  SD+MH+GD IP V  G  L  A+  ++ K  G   VV+    L
Sbjct: 190 AFSHPGGSLGRRLLLRVSDIMHTGDQIPQVAEGTTLSGALLEITRKGLGMTTVVNAAGTL 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T  ++DVM +N K I  D L   A+ ++ +  I+ L V D
Sbjct: 250 TGIFTDGDLRRTLDKSVDVHTTPIQDVMTRNGKTIRADHLAAEALNIMEEMKINALPVTD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G ++  DLLR G+I
Sbjct: 310 ANGTLVGAINMHDLLRAGVI 329


>gi|294668173|ref|ZP_06733280.1| arabinose 5-phosphate isomerase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309881|gb|EFE51124.1| arabinose 5-phosphate isomerase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 326

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 149/321 (46%), Positives = 209/321 (65%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A   +  E  GL  +   L G     F  A + I +  GR+V+ GIGKSGH+G K+A
Sbjct: 10  IEWAREVLQIEADGLKEISDGLNG----TFAAAADTILSCTGRLVVMGIGKSGHVGHKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+ AIL   +R +I LI 
Sbjct: 66  ATLASTGTPAFFVHPAEAAHGDLGMIVDGDVVLAISNSGESDEISAILPALKRKNICLIC 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+  +S +A HADI LT     E+CP GLAPT+S    +A+GDALA+ALL +R+F+  D
Sbjct: 126 ITAHPESTMARHADIHLTAVVSQEACPLGLAPTSSTTAVMALGDALAVALLRARSFTRED 185

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G+LG  L +  +D+MHSGD+ P V    PL DA+ I+SEK  G +AV D+G +
Sbjct: 186 FALSHPAGRLGKRLLLRVADLMHSGDNSPAVTEDTPLKDAVVIMSEKGLGMLAVTDQGGR 245

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKGI+T+GD+ R F K      L+V DVM  NPK I  D L T A++ ++Q++++ L+VV
Sbjct: 246 LKGILTDGDLRRLFQKCETFAGLTVNDVMHPNPKSIAPDRLATEALKEMQQNHVNGLLVV 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +     +G ++  DLL   I+
Sbjct: 306 EGDGILVGALNMHDLLAARIL 326


>gi|294675671|ref|YP_003576286.1| arabinose 5-phosphate isomerase [Rhodobacter capsulatus SB 1003]
 gi|294474491|gb|ADE83879.1| arabinose 5-phosphate isomerase [Rhodobacter capsulatus SB 1003]
          Length = 318

 Score =  268 bits (686), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 147/326 (45%), Positives = 206/326 (63%), Gaps = 11/326 (3%)

Query: 19  MKNSTV---QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           M +ST    + A R I  E  GL++L  SL G     F  AV+ I + +GRV+++G+GKS
Sbjct: 1   MTSSTTDFAKTARRVIEIEIAGLTALAESLDG----AFGAAVQMILSARGRVIVSGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+ FVH AEASHGDLGM+TR+D+ +VLS SG + EL  ++ + R
Sbjct: 57  GHIARKIAATLASTGTPAQFVHPAEASHGDLGMVTREDVALVLSNSGETPELADLIAHTR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RFSIPLI + +   S +   AD+ L LP+  E+C  G+ PTTS  M LA+GDALA+AL+E
Sbjct: 117 RFSIPLIGVAARPDSTLLRQADVALVLPQAVEACGTGVVPTTSTTMTLALGDALAVALME 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+   F   HPGGKLG      +D+MH    +PLV    P+ +A+ I+S+K FG V 
Sbjct: 177 HRQFTPEHFRTFHPGGKLGAKLSKVADLMHR--DMPLVTGTTPMPEALLIISQKGFGVVG 234

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V D G +L GI+T+GD+ R+    L + SV +VM + P+ I    L   A+ ++    I+
Sbjct: 235 VTDAGGRLIGIVTDGDLRRHM-DGLLSRSVAEVMTRTPRTIAPTALAEAAVAVMNDCKIT 293

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L  V+D  K +GI+H  D LR G++
Sbjct: 294 CLFAVED-GKPVGILHIHDCLRAGVV 318


>gi|126463574|ref|YP_001044688.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126105238|gb|ABN77916.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 321

 Score =  268 bits (685), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/327 (45%), Positives = 203/327 (62%), Gaps = 12/327 (3%)

Query: 19  MKNST---VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           M +ST   +  A R I AE   L+ L +SL       F  AVE I   +GRV+++G+GKS
Sbjct: 1   MTSSTTDFLATARRVIEAETTALTMLGASLDD----SFGAAVETILRARGRVIVSGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + R
Sbjct: 57  GHIGRKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLI + S  +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E
Sbjct: 117 RFDIPLIGVASRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALME 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+   F V HPGGKLG      +D+MH    +PLV +G  + +A+  +S   FG + 
Sbjct: 177 HRQFTPEHFRVFHPGGKLGARLARVADLMHR--DLPLVAMGTSMGEALITMSRLGFGVLG 234

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V     +L GIIT+GD+ R+    L +LSVEDVM +NP  I  D L   A+ ++    I+
Sbjct: 235 VTGPEGRLAGIITDGDLRRHL-DGLLSLSVEDVMTRNPLTIPPDALAEKAVAVMNARKIT 293

Query: 316 VLMVVDD--CQKAIGIVHFLDLLRFGI 340
            L VV+      A G++H  D LR G+
Sbjct: 294 SLFVVNPEGSGAAEGLIHIHDCLRAGV 320


>gi|332559627|ref|ZP_08413949.1| KpsF/GutQ family protein [Rhodobacter sphaeroides WS8N]
 gi|332277339|gb|EGJ22654.1| KpsF/GutQ family protein [Rhodobacter sphaeroides WS8N]
          Length = 321

 Score =  268 bits (684), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 149/327 (45%), Positives = 203/327 (62%), Gaps = 12/327 (3%)

Query: 19  MKNST---VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           M +ST   +  A R I AE   L+ L +SL       F  AVE I   +GRV+++G+GKS
Sbjct: 1   MTSSTTDFLATARRVIEAETTALTMLGASLDD----SFGAAVETILRARGRVIVSGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + R
Sbjct: 57  GHIGRKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLI + S  +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E
Sbjct: 117 RFDIPLIGVASRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALME 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+   F V HPGGKLG      +D+MH    +PLV +G  + +A+  +S   FG + 
Sbjct: 177 HRQFTPEHFRVFHPGGKLGARLARVADLMHR--DLPLVAMGTSMGEALITMSRLGFGVLG 234

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V     +L GIIT+GD+ R+    L +LSVEDVM ++P  I  D L   A+ ++    I+
Sbjct: 235 VTGPEGRLAGIITDGDLRRHL-DGLLSLSVEDVMTRHPLTIAPDALAEKAVAVMNARKIT 293

Query: 316 VLMVVDD--CQKAIGIVHFLDLLRFGI 340
            L VVD      A G++H  D LR G+
Sbjct: 294 SLFVVDPEGSGAAEGLIHIHDCLRAGV 320


>gi|83955923|ref|ZP_00964434.1| Sugar phosphate Isomerase [Sulfitobacter sp. NAS-14.1]
 gi|83839687|gb|EAP78865.1| Sugar phosphate Isomerase [Sulfitobacter sp. NAS-14.1]
          Length = 323

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 205/322 (63%), Gaps = 7/322 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+ST   A+R + AE   L ++  +L       F  +++ +   +GRV+++G+GKSGHI 
Sbjct: 9   KHSTAT-AIRVLNAEADALRAMALALP----RGFENSIDLMAGARGRVIVSGMGKSGHIA 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+ F+H  EASHGDLGM+T DD+ ++LS SG + E+  ++ Y RRF I
Sbjct: 64  RKIAATLASTGTPAMFLHPGEASHGDLGMVTVDDVCLLLSNSGETREMSDLIQYTRRFDI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAIT    S +A  +D+ L LP  PE+C  G+APTTS    LA+GDALAI ++E R F
Sbjct: 124 PMIAITRVEDSTLARQSDVALILPDMPEACAIGMAPTTSTTCALALGDALAITMMEERGF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             + F+V HPGGKLG  F+  SDVMHSGD++P+V     + + +  +S K FG +A V E
Sbjct: 184 MADSFHVFHPGGKLGAQFMRVSDVMHSGDNLPIVSPATTMGETLITMSAKGFG-IAAVAE 242

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G+IT+GD+ RN    ++  + + V   NP     + LL+ A+ L+ ++ I  +MV
Sbjct: 243 DDRLYGVITDGDLRRNLDGLMDAFAGQ-VATPNPHTATPNMLLSEALGLMNRYKIGAIMV 301

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD   +  G++H  D LR G++
Sbjct: 302 VDGNSRLCGLLHIHDCLRAGVM 323


>gi|331005041|ref|ZP_08328445.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC1989]
 gi|330421096|gb|EGG95358.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC1989]
          Length = 331

 Score =  267 bits (682), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 142/334 (42%), Positives = 208/334 (62%), Gaps = 14/334 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           V +  H  +   TVQ  L +I           + L   +   FH A E IK  KG+VV+T
Sbjct: 9   VKKMDHIAIGKRTVQMELEAI-----------ADLSARIDQTFHDACELIKQCKGKVVVT 57

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+FF+H  EASHGDLGMI+ +D +I +S SG+S E+ A+
Sbjct: 58  GMGKSGHIGKKIAATLASTGTPAFFIHPGEASHGDLGMISTNDAVIAISNSGNSAEIIAL 117

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +    R   PLI++T    S +A  AD+ L +    E+CP  LAPT+S  + L +GDALA
Sbjct: 118 IPLLHRLKTPLISMTGNTTSSLAIAADVNLDVSVTCEACPLDLAPTSSTTVTLVMGDALA 177

Query: 191 IALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALLE++ FS  DF   HPGG LG  L +  SDVMH+GD IP V +   L  A+  +++K
Sbjct: 178 VALLEAKGFSAEDFAFSHPGGALGKRLLLKVSDVMHTGDKIPSVSLQASLSQALLEMTQK 237

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G   +VD+ ++L GI T+GD+ R   +  D+  + ++D+M  +P  I E+TL   A+ 
Sbjct: 238 GLGMTTIVDDEKRLMGIFTDGDLRRTIDQGLDIRVIQIQDIMNTSPNTIGENTLAAEALG 297

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ + +I+ L++ D  Q+A+G+VH  D+LR GI+
Sbjct: 298 IMEEKSITSLVISDSQQRAVGVVHLHDILRSGIL 331


>gi|32456004|ref|NP_862006.1| rb131 [Ruegeria sp. PR1b]
 gi|22726356|gb|AAN05152.1| RB131 [Ruegeria sp. PR1b]
          Length = 323

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/285 (47%), Positives = 189/285 (66%), Gaps = 2/285 (0%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AV  ++A++GRV+++G+GKSGHIG+K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ 
Sbjct: 40  AVRILEAMQGRVIVSGVGKSGHIGNKIAATLASTGTPAQFVHATEASHGDLGMVTARDVC 99

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +V+S SG + EL  I+ Y+RRF IPLIAIT   +S +A  AD+ L LP  PE+C  G+AP
Sbjct: 100 LVISNSGETRELADIITYSRRFGIPLIAITRVAESTLAQQADVTLLLPDAPEACGIGVAP 159

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           TTS    LAIGDALA+AL+  R F   DF V HPGGKLG   +    +MH+G+++PLV  
Sbjct: 160 TTSTTATLAIGDALAVALMARRGFQREDFQVFHPGGKLGAQLMLVDALMHAGEALPLVLP 219

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
             P+ +A+  ++ K FG   +++E  +L GIIT+GD+ RN    L   +   V  ++P+V
Sbjct: 220 DTPMAEALLTMTAKGFGVAGLIEE-DRLAGIITDGDLRRNM-TGLMEKTAGAVATRDPQV 277

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I    L + A+  +    IS L V+D     +G++H  D LR GI
Sbjct: 278 IRSGALASEALHEMNSRKISSLFVLDQDDHVVGLLHIHDCLRAGI 322


>gi|121998900|ref|YP_001003687.1| KpsF/GutQ family protein [Halorhodospira halophila SL1]
 gi|121590305|gb|ABM62885.1| KpsF/GutQ family protein [Halorhodospira halophila SL1]
          Length = 339

 Score =  266 bits (681), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 135/292 (46%), Positives = 191/292 (65%), Gaps = 3/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A   + A +GRV++TG+GKSGHIGSK+A+TLASTGTP+FFVH  EASHGDLGM+T D
Sbjct: 48  FSEACRHMLACRGRVIVTGMGKSGHIGSKMAATLASTGTPAFFVHPGEASHGDLGMVTAD 107

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ LS SG +DEL AI+   +R  +PLIA+T    S +A  A + L +  E E+CP G
Sbjct: 108 DVVVALSNSGETDELTAIVPLIKRLGVPLIALTGRPGSTLAQAASVHLDVSVEQEACPLG 167

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT S    LA+GDALA+ALL++R F+  DF   HPGGKLG  L +   D+M +G+ +P
Sbjct: 168 LAPTASTTASLAMGDALAVALLDARGFTAEDFARSHPGGKLGRRLLLHIDDIMQTGERVP 227

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V+ G PL DA+  +S K  G  A+VDE  ++ GI T+GD+ R   +  D++   +E VM
Sbjct: 228 RVQPGTPLRDALLEISRKGLGMTAIVDEQHRVLGIFTDGDLRRTLDRGADIHQTPIEAVM 287

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +P+    D L   A + + +H I+ L+V D   + +G ++  DLLR G++
Sbjct: 288 TPSPQTASPDLLAAEAAERMERHRINGLLVTDAEGRLVGALNMHDLLRAGVV 339


>gi|90415754|ref|ZP_01223688.1| hypothetical protein GB2207_10561 [marine gamma proteobacterium
           HTCC2207]
 gi|90333077|gb|EAS48247.1| hypothetical protein GB2207_10561 [marine gamma proteobacterium
           HTCC2207]
          Length = 323

 Score =  266 bits (680), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 145/321 (45%), Positives = 207/321 (64%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E   ++ L    Q  L   F  A E + A +GRV++TG+GKSGHIG+K+A
Sbjct: 7   ITSAQRTIKMEADAVAEL----QHRLDDSFVTACETMLACEGRVIVTGMGKSGHIGNKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH  EASHGDLGMIT++D++IV+S SGS+ E+  IL   +R  IP+I+
Sbjct: 63  ATLASTGTPSFFVHPGEASHGDLGMITKNDVVIVISNSGSTAEVITILPLIKRLGIPMIS 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T +  SV++  A   L +    E+CP  LAPTTS  + LA+GDALAIALLESR F+  D
Sbjct: 123 MTGDPGSVLSQAARANLDVSVTSEACPLNLAPTTSTTVTLAMGDALAIALLESRGFTAED 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +  +D+MH    +P V    PL  A+ +++EK FG   VV +  K
Sbjct: 183 FAFSHPGGALGRKLLLRVADIMHKDVEVPRVLTSEPLHQALLVMTEKGFGMTTVVSDENK 242

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R  +   D+N +++ DVM  NPK I  + L   A++++   +I+ L+V 
Sbjct: 243 LLGVFTDGDLRRIVDAKVDINNVTMADVMSPNPKTINGEILAAQALKIMEDGSITALIVE 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+ Q  IG++H  D+LR G++
Sbjct: 303 DEHQSPIGVLHMHDILRAGVM 323


>gi|56695011|ref|YP_165356.1| arabinose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
 gi|56676748|gb|AAV93414.1| arabinose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
          Length = 322

 Score =  266 bits (680), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 206/323 (63%), Gaps = 7/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S +  A + ++ E R L +L  SL       F  AVE I   KGRV+++GIGKSGHIG
Sbjct: 4   RSSFIDTARQVVLDEARALDALSESL----GDGFAEAVELILRTKGRVIVSGIGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP++FVH AEASHGDLGM++ DD+++ +S SG + EL  +L + RRF+I
Sbjct: 60  HKIAATLASTGTPAYFVHPAEASHGDLGMLSGDDVVLAISNSGEAPELANLLAFTRRFAI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI ++S+++S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F
Sbjct: 120 PLIGLSSKSESSLMQQADVHLLIPALGEACGFGMVPSISTTLTLAMGDALAIALMKYRDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              +F V HPGGKLG      SD+MH G+++PL+    P+ +A+  +S K FG V V D 
Sbjct: 180 RPENFRVFHPGGKLGARLSRVSDLMHGGEAVPLIAADTPMSEALLEISRKGFGVVGVTDG 239

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L GI+T+GD+ R+    L+  + + VM  NP  I  D+L   A+ ++    I+ L V
Sbjct: 240 AGHLAGIVTDGDLRRHMSGLLDKTAAQ-VMTANPTTIAPDSLAEEAVAIMNARKITSLFV 298

Query: 320 VDDCQKAI--GIVHFLDLLRFGI 340
           VD  +  +  G++H  D LR G+
Sbjct: 299 VDPAEPGVARGLLHIHDCLRVGL 321


>gi|119385335|ref|YP_916391.1| KpsF/GutQ family protein [Paracoccus denitrificans PD1222]
 gi|119375102|gb|ABL70695.1| KpsF/GutQ family protein [Paracoccus denitrificans PD1222]
          Length = 315

 Score =  266 bits (680), Expect = 3e-69,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 195/321 (60%), Gaps = 7/321 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  A R I  E  GL+ L   L    S  F  AVE I A +GRVV++G+GKSGH+G 
Sbjct: 2   SAYLDTARRVIRTEAEGLALLADGL----SDSFDRAVETILAARGRVVVSGMGKSGHVGR 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGM+T+ D+ +VLS SG + E+  I+ + RRF IP
Sbjct: 58  KIAATLASTGTPAQFVHPAEASHGDLGMVTQGDVALVLSNSGETPEIADIVAHTRRFQIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI +    +S +   AD+ L LP  PE+C  G+ PTTS  M +A+GDALA+AL+E R F+
Sbjct: 118 LIGVAGRPQSTLLRQADVALVLPAAPEACGTGIVPTTSTTMTMALGDALAVALMEHRQFT 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F   HPGGKLG      +D+MH    +PLV    P+ +A+  +S+K FG   V D  
Sbjct: 178 PEHFRTFHPGGKLGAKLSRVADLMHQ--DMPLVPETAPMAEALLTISQKSFGVTGVTDAR 235

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ R+    L+  S  +VM +NP+ I  D L   A+  ++   I+ L  V
Sbjct: 236 GRLTGIITDGDLRRHMQGLLDH-SAAEVMTRNPRTIGPDQLAEAALAEMQARRITCLFAV 294

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
                  G++H  D LR G++
Sbjct: 295 TPEGTPAGLIHIHDFLRTGLV 315


>gi|84501335|ref|ZP_00999540.1| Sugar phosphate Isomerase [Oceanicola batsensis HTCC2597]
 gi|84390626|gb|EAQ03114.1| Sugar phosphate Isomerase [Oceanicola batsensis HTCC2597]
          Length = 325

 Score =  266 bits (680), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 140/305 (45%), Positives = 188/305 (61%), Gaps = 2/305 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R  S+  + L  EL+ +F   V  +  ++GRVVI+G+GKSGH+ +K+A+T ASTGTP+ F
Sbjct: 22  RSESAALAQLADELTAEFDSVVAALLPVQGRVVISGMGKSGHVAAKIAATFASTGTPAQF 81

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH  EASHGDLGMITR D  I++S SG + EL  I+ + RRF IPLI IT    S +A  
Sbjct: 82  VHPGEASHGDLGMITRADATILISNSGETKELADIIAHTRRFDIPLIGITKRAGSALAKQ 141

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           AD VL L   PE+C  G+APTTS  M +A+GDALA+AL+E+R F   DF+  HPGG LG 
Sbjct: 142 ADHVLLLSDAPEACSIGMAPTTSTTMTMALGDALAVALMEARGFDSTDFHTFHPGGTLGA 201

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +    VMH GD++P+V+    + D +  +S K FG VAV + G +L G+IT+GD+ RN
Sbjct: 202 QLLTVRAVMHQGDALPVVRPETGMGDTLLEMSAKGFGVVAVTEAG-RLTGVITDGDLRRN 260

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L       V    P+ I  D LL  A+ ++  + IS L  VDD     G+VH  D 
Sbjct: 261 LEGLLER-KAGAVATGRPRTISADILLVEALGIMNDNKISALFAVDDEGSLEGLVHIHDA 319

Query: 336 LRFGI 340
           LR G+
Sbjct: 320 LRVGV 324


>gi|160901482|ref|YP_001567064.1| KpsF/GutQ family protein [Delftia acidovorans SPH-1]
 gi|160367066|gb|ABX38679.1| KpsF/GutQ family protein [Delftia acidovorans SPH-1]
          Length = 333

 Score =  266 bits (679), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 142/311 (45%), Positives = 190/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   L ++   L G     F   V++I  + GRVV+ G+GKSGH+G K+A+TLASTGTP+
Sbjct: 27  EADALQAMSQRLDG----VFGEVVQRILRLSGRVVVMGMGKSGHVGRKVAATLASTGTPA 82

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T  DL++ LS SG +DEL A+L   +R  I L+A+T   +S +A
Sbjct: 83  FFVHPAEASHGDLGMVTGIDLVLALSNSGEADELAALLPAIKRQGIALVAMTGGAQSTLA 142

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HAD VL    E E+CP  LAPT S   Q+A+GDALA+ALL++R F   DF   HPGG L
Sbjct: 143 RHADWVLNTRVEREACPLNLAPTASTTAQMAMGDALAVALLDARGFGAEDFARSHPGGAL 202

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM SGD +P V      ++ +  +S K  GC A+VD    L+GI T+GD+
Sbjct: 203 GRKLLTHVRDVMRSGDELPKVGADASFVELMREMSAKGLGCSAIVDAAGVLQGIFTDGDL 262

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      DL  L   DVM K P+ I ED L   A  ++ +H I+ ++V D  ++  G+V
Sbjct: 263 RRRVEAGTDLRALQAGDVMHKGPRTIAEDALAVDAASMMEEHGITAVLVADAQRQLRGVV 322

Query: 331 HFLDLLRFGII 341
           H  DL+R  +I
Sbjct: 323 HIRDLMRAKVI 333


>gi|264680856|ref|YP_003280766.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|299531899|ref|ZP_07045299.1| chloride channel protein [Comamonas testosteroni S44]
 gi|262211372|gb|ACY35470.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|298720074|gb|EFI61031.1| chloride channel protein [Comamonas testosteroni S44]
          Length = 333

 Score =  265 bits (678), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 138/297 (46%), Positives = 187/297 (62%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L+  F   V++I  + GRVV+ G+GKSGH+G K+A+TLASTGTPSFFVH AEASHGDLG
Sbjct: 37  RLNGAFTAVVQRILQLPGRVVVMGMGKSGHVGRKVAATLASTGTPSFFVHPAEASHGDLG 96

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+T+DDL++ LS SG +DEL  +L   +R  +PL+A+T   +S +A HAD VL    + E
Sbjct: 97  MLTQDDLVLALSNSGETDELTGVLPAIKRMGVPLVAVTGGLQSTLAKHADWVLDTHVDKE 156

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L     DVM  
Sbjct: 157 ACPLNLAPTASTTAQLAMGDALAVALLDARGFGAEDFARSHPGGALGRRLLTHVRDVMRR 216

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G  +P V      +D +  +S K  GC AVV+   +L GI T+GD+ R      DL + +
Sbjct: 217 GVDVPQVAQDVSSVDLMREMSAKGLGCSAVVNASGELVGIFTDGDLRRCVEAGVDLRSRT 276

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +DVM   P  I  D L   A +++ +H I+ ++V DD Q+  G+VH  DL+R  +I
Sbjct: 277 AQDVMHARPLTIKPDLLAVAAARMMEEHGITAVLVADDNQRLQGVVHIRDLMRAKVI 333


>gi|254440435|ref|ZP_05053929.1| sugar isomerase, KpsF/GutQ family [Octadecabacter antarcticus 307]
 gi|198255881|gb|EDY80195.1| sugar isomerase, KpsF/GutQ family [Octadecabacter antarcticus 307]
          Length = 322

 Score =  265 bits (678), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 145/319 (45%), Positives = 205/319 (64%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A R I AE   L +L  ++ G L+     AV+ I   KGR++I+GIGKSGHI  K+A+
Sbjct: 9   ETARRVIRAEADALIALADAIDGSLAD----AVDLILNAKGRIIISGIGKSGHIARKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+TR D+++ +S SG + EL  ++ Y +RF+IPLI +
Sbjct: 65  TLASTGTPAHFVHPAEASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  +DIVL +PK PE+C  G+ PTTS  M LA+GDAL +A++E R F+ ++F
Sbjct: 125 TSRAESSLASQSDIVLLMPKLPEACGTGVVPTTSTTMTLALGDALCVAIMEHRAFTPDNF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGGKLG       D+MH  D+IPLV    P+ D +  +S+K FG V V+D+   + 
Sbjct: 185 RDFHPGGKLGAQLSRVGDLMHKDDAIPLVGERTPMSDTLLTISQKGFGVVGVLDDNGYIA 244

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--D 322
           GI+T+GD+ RN    L  L+  +VM + P  I   +L   A+ ++ +  I+ L VVD   
Sbjct: 245 GIVTDGDLRRNM-AGLLELTAGEVMTRAPGTIDTASLAEEAVNVMNERKITCLFVVDTKG 303

Query: 323 CQKAIGIVHFLDLLRFGII 341
            +K  GI+H  D LR GI+
Sbjct: 304 SRKVAGILHIHDCLRAGIV 322


>gi|329118786|ref|ZP_08247483.1| arabinose 5-phosphate isomerase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465073|gb|EGF11361.1| arabinose 5-phosphate isomerase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 332

 Score =  265 bits (677), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 149/336 (44%), Positives = 209/336 (62%), Gaps = 10/336 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K++ +  ++    +  Q  LR    E  GL  +   L G+    F  AV+ +    GR+V
Sbjct: 4   KTIMQTNNAAQYTAWAQEVLR---IEADGLREISDGLNGD----FAAAVDAVLHCTGRLV 56

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TGIGKSGH+G K+A+TLASTGTP+FFVH AEA+HGDLGMI   D ++ +S SG SDE+ 
Sbjct: 57  VTGIGKSGHVGHKIAATLASTGTPAFFVHPAEAAHGDLGMIVDGDAVLAISNSGESDEIN 116

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           AIL   +R +I LI IT+  +S +A HADI LT     E+CP GLAPT+S    +A+GDA
Sbjct: 117 AILPALKRKNITLICITAHPESTMARHADIHLTAAVSQEACPLGLAPTSSTTAVMALGDA 176

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           LA++LL +R+F+  DF + HP G+LG  L +  +D+MH G   P V    PL DAI I+S
Sbjct: 177 LAVSLLRARSFTREDFALSHPAGRLGKRLLLRVADLMHGGADSPAVAEHTPLKDAIVIMS 236

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVA 305
           EK  G +AV D   +LKG++T+GD+ R F K      L+V DVM   PK I  D L T A
Sbjct: 237 EKGLGMLAVTDASGRLKGVLTDGDLRRLFQKSETFAGLTVNDVMHDTPKTIAPDKLATEA 296

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++NI  L  VD+    +G ++  DLL+  I+
Sbjct: 297 LKEMQRYNIGGLFAVDENGLLLGALNMHDLLQARIV 332


>gi|77464734|ref|YP_354238.1| sugar phosphate isomerase [Rhodobacter sphaeroides 2.4.1]
 gi|77389152|gb|ABA80337.1| Sugar phosphate Isomerase [Rhodobacter sphaeroides 2.4.1]
          Length = 307

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 196/312 (62%), Gaps = 9/312 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG K+ +TLASTG
Sbjct: 2   IEAETTALTMLGASLDD----SFGAAVETILRARGRVIVSGMGKSGHIGRKITATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF IPLI + S  +S
Sbjct: 58  TPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDIPLIGVASRAQS 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F+   F V HPG
Sbjct: 118 TLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQFTPEHFRVFHPG 177

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG      +D+MH    +PLV +G  + +A+  +S   FG + V     +L GIIT+G
Sbjct: 178 GKLGARLARVADLMHR--DLPLVAMGTSMGEALITMSRLGFGVLGVTGPEGRLAGIITDG 235

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIG 328
           D+ R+    L +LSVEDVM ++P  I  D L   A+ ++    I+ L VVD      A G
Sbjct: 236 DLRRHL-DGLLSLSVEDVMTRHPLTIAPDALAEKAVAVMNGRKITSLFVVDPEGSGAAEG 294

Query: 329 IVHFLDLLRFGI 340
           ++H  D LR G+
Sbjct: 295 LIHIHDCLRAGV 306


>gi|221640648|ref|YP_002526910.1| KpsF/GutQ family protein [Rhodobacter sphaeroides KD131]
 gi|221161429|gb|ACM02409.1| KpsF/GutQ family protein [Rhodobacter sphaeroides KD131]
          Length = 307

 Score =  264 bits (675), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 144/312 (46%), Positives = 195/312 (62%), Gaps = 9/312 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG K+ +TLASTG
Sbjct: 2   IEAETTALTMLGASLDD----SFGAAVETILRARGRVIVSGMGKSGHIGRKITATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF IPLI + S  +S
Sbjct: 58  TPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDIPLIGVASRAQS 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F+   F V HPG
Sbjct: 118 TLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQFTPEHFRVFHPG 177

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG      +D+MH    +PLV +G  + +A+  +S   FG + V     +L GIIT+G
Sbjct: 178 GKLGARLARVADLMHR--DLPLVAMGTSMGEALITMSRLGFGVLGVTGPEGRLAGIITDG 235

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIG 328
           D+ R+    L +LSVEDVM + P  I  D L   A+ ++    I+ L VVD      A G
Sbjct: 236 DLRRHL-DGLLSLSVEDVMTRTPLTIAPDALAEKAVAVMNGRKITSLFVVDPEGSGAAEG 294

Query: 329 IVHFLDLLRFGI 340
           ++H  D LR G+
Sbjct: 295 LIHIHDCLRAGV 306


>gi|163733025|ref|ZP_02140469.1| arabinose 5-phosphate isomerase [Roseobacter litoralis Och 149]
 gi|161393560|gb|EDQ17885.1| arabinose 5-phosphate isomerase [Roseobacter litoralis Och 149]
          Length = 320

 Score =  263 bits (673), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 143/317 (45%), Positives = 197/317 (62%), Gaps = 9/317 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R I  E   L  LE S+       F  AV+ + A  GR+++ G+GKSGHI  K+A+TL
Sbjct: 9   ARRVIRIEIDALQQLEQSIDDS----FAKAVDLMIAATGRIIVCGMGKSGHIARKIAATL 64

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+ FVH AEASHGDLGM+   D++IVLS SG + EL  ++ Y RRF+IP+I + S
Sbjct: 65  ASTGTPAHFVHPAEASHGDLGMMGAGDVVIVLSNSGETPELADVIAYTRRFAIPMIGVAS 124

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +   +D+ L LP+  E+C  G+ PT+S  M LA+GDALA+AL+E R F+   F  
Sbjct: 125 RPESTLLRQSDVALILPRAQEACGTGIVPTSSTTMTLALGDALAVALMEHRQFTPEHFRN 184

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG      +D+MH+GD++P+V    P+ DA+  + +K FG VAV D   +L+GI
Sbjct: 185 FHPGGKLGAQLSKVADLMHTGDAVPVVSGNAPMSDALREIGQKGFGVVAVSDPQGRLQGI 244

Query: 267 ITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--C 323
           IT GDI R  H D L +    +VM  +P  I  D L   A+ ++    I+ L+VVD    
Sbjct: 245 ITNGDISR--HMDGLASFEANNVMTPSPITITPDALAEQAVGIMNDKKITCLLVVDPEVP 302

Query: 324 QKAIGIVHFLDLLRFGI 340
           QK IG++H  D LR G+
Sbjct: 303 QKLIGLIHIHDCLRVGL 319


>gi|84514851|ref|ZP_01002214.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
 gi|84511010|gb|EAQ07464.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
          Length = 322

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 198/318 (62%), Gaps = 7/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R I+ E   L++L ++L       F  AV  +   KGRV+++G+GKSGHI  K+A+T
Sbjct: 10  TARRVILQEADALTALSATLDA----NFADAVTLLLNAKGRVIVSGMGKSGHIARKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF IP+I + 
Sbjct: 66  FASTGTPAHFVHPAEASHGDLGMMTRGDVVLVLSNSGETPELADLVAYTRRFGIPMIGVA 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S  +S +   AD+ +TLP+  E+C  G+ PT S  M LA+GDALAIAL+E R F+  +F 
Sbjct: 126 SRAESTLIQQADVGITLPQLGEACGRGIVPTISTTMTLALGDALAIALMEHRAFTPENFR 185

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
             HPGGKLG      +D+MH  D+IPLV++  P+ D + ++++K FG  AV+ E  +L G
Sbjct: 186 DFHPGGKLGAQLSKVADLMHRDDAIPLVRVDTPMSDVLLVITQKGFGVAAVLGEDDRLVG 245

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ- 324
           I+T+GD+ R+    L+  + E VM  NP  +    L   A+ ++    I+ L  +D    
Sbjct: 246 IVTDGDLRRHMQGLLDHTAGE-VMTANPTTVSPHALAEEAVNIMNSRKITCLFALDPANP 304

Query: 325 -KAIGIVHFLDLLRFGII 341
            K  GI+H  D LR GI+
Sbjct: 305 GKVTGILHIHDCLRAGIV 322


>gi|149913656|ref|ZP_01902189.1| KpsF/GutQ family protein [Roseobacter sp. AzwK-3b]
 gi|149812776|gb|EDM72605.1| KpsF/GutQ family protein [Roseobacter sp. AzwK-3b]
          Length = 319

 Score =  263 bits (672), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 131/297 (44%), Positives = 189/297 (63%), Gaps = 2/297 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F   VE +  + GRV+++G+GKSGH+ +K+A+T+ASTG+P+ +VH  EASH
Sbjct: 24  TLLDALPHDFDAVVELLLTVPGRVIVSGMGKSGHVAAKIAATMASTGSPAQYVHPGEASH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT  D +I++S SG + EL  I+ + RRFSIPLI IT    S +   +D +L LP
Sbjct: 84  GDLGMITAQDAVILISNSGETRELADIIAHTRRFSIPLIGITKRADSTLGTQSDHLLALP 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           + PE+C  G+APTTS  + +A+GDALA+AL+  R F   +F   HPGG LG   +  S V
Sbjct: 144 EAPEACAIGMAPTTSTTLTMALGDALAVALMRLRGFERANFLAFHPGGTLGAQLLKVSSV 203

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MHSG  +P+V    P+ D +  ++ K FG  A+V+EG +L G+IT+GD+ RN   DL   
Sbjct: 204 MHSGADLPVVHADTPMGDTLLEMTAKGFGVAALVEEG-RLIGVITDGDLRRNL-ADLMER 261

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  +V  + P+ I  D LL+ A+ ++  + IS L  VDD  +  G+VH  D LR G+
Sbjct: 262 TAGEVATRGPRTISPDALLSEALGVMNANKISALFAVDDAGRLRGLVHIHDALRAGV 318


>gi|310816310|ref|YP_003964274.1| KpsF/GutQ family protein [Ketogulonicigenium vulgare Y25]
 gi|308755045|gb|ADO42974.1| KpsF/GutQ family protein [Ketogulonicigenium vulgare Y25]
          Length = 324

 Score =  263 bits (671), Expect = 4e-68,   Method: Compositional matrix adjust.
 Identities = 131/288 (45%), Positives = 184/288 (63%), Gaps = 1/288 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV+ I  +KGRV+++G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  
Sbjct: 37  FSAAVDLILGLKGRVIVSGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTAQ 96

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL I++S SG + EL  ++ +  RF +P+I I+ +  S +   A + LT P  PE+C  G
Sbjct: 97  DLCIMISNSGETSELSDLIAHCVRFGVPIIGISKQPDSTLMRAATLRLTFPDLPEACSIG 156

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           LAPTTS  + L +GDALAI+L+E+R F   +F   HPGGKLG     A+ +MH+GD +PL
Sbjct: 157 LAPTTSTTLSLGLGDALAISLMEARAFQPENFRTYHPGGKLGARLATAAQLMHAGDEVPL 216

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+   P+ + I  ++   FG   VVD    L G+I++GD+ R+    +   ++ DV  KN
Sbjct: 217 VREDTPMAEVILSMTSHGFGVAGVVDAQGALCGVISDGDLRRHMSTLMAQRAI-DVATKN 275

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P  I  D L    +  + Q+ IS + V+D  Q  IGIVH  D LR G+
Sbjct: 276 PIAIGADKLAVDILATMNQYKISAIFVIDSAQAPIGIVHLHDCLRAGV 323


>gi|221069832|ref|ZP_03545937.1| KpsF/GutQ family protein [Comamonas testosteroni KF-1]
 gi|220714855|gb|EED70223.1| KpsF/GutQ family protein [Comamonas testosteroni KF-1]
          Length = 333

 Score =  262 bits (670), Expect = 5e-68,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 188/311 (60%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   L S+   L G     F   V++I  + GRVV+ G+GKSGH+G K+A+TLASTGTP+
Sbjct: 27  EAAALRSMSERLNG----AFTAVVQRILQLPGRVVVMGMGKSGHVGRKVAATLASTGTPA 82

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DDL++ LS SG +DEL  +L   +R  +PL+A+T    S +A
Sbjct: 83  FFVHPAEASHGDLGMLTQDDLVLALSNSGETDELTGVLPAIKRMGVPLVAVTGGLSSTLA 142

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HAD VL    + E+CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG L
Sbjct: 143 KHADWVLDTRVDKEACPLNLAPTASTTAQLAMGDALAVALLDARGFGAEDFARSHPGGAL 202

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM  G  +P V      ++ +  +S K  GC AVV+ G +L GI T+GD+
Sbjct: 203 GRRLLTHVRDVMRRGADVPQVVQDVSSVELMREMSAKGLGCSAVVNAGGELVGIFTDGDL 262

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      DL +    DVM   P  I  D L   A +++ +H I+ ++V DD Q   G+V
Sbjct: 263 RRCVEAGVDLRSRVASDVMHPRPLTIKPDLLAVAAARMMEEHGITAVLVTDDSQHLQGVV 322

Query: 331 HFLDLLRFGII 341
           H  DL+R  +I
Sbjct: 323 HIRDLMRAKVI 333


>gi|15606685|ref|NP_214065.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
 gi|7388505|sp|O67500|Y1546_AQUAE RecName: Full=Uncharacterized phosphosugar isomerase aq_1546
 gi|2983910|gb|AAC07460.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
          Length = 322

 Score =  261 bits (668), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 138/312 (44%), Positives = 201/312 (64%), Gaps = 7/312 (2%)

Query: 29  RSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R +I E+ +GL  L SSL       F  AVE ++  +G+V++TGIGKSGHI  K++STL+
Sbjct: 11  REVIREEIKGLERLLSSLDE----NFSKAVEILRNCEGKVILTGIGKSGHIARKISSTLS 66

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS F+H AEA HGD+G++   D +I +S SG S E+  +L YA+  +IP+I IT  
Sbjct: 67  STGTPSVFLHPAEALHGDMGLLDSKDALIAISNSGESTEVLYVLQYAKALNIPVIGITGN 126

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            KS +A ++D+VL +P + E+CP  LAPT S+ + LA+GDA+A+ L++ + FS+ DF   
Sbjct: 127 EKSSLAKYSDVVLKIPVDREACPFNLAPTVSSTVTLALGDAIAMTLMKLKGFSQEDFAKR 186

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HP G LG       D+ H+G+ +P+VK    + +AI  ++ K FG  AVV+E  KL GII
Sbjct: 187 HPAGALGRKLRLVKDLYHTGEEVPIVKEDTSMKEAIIEMTAKGFGATAVVNEEGKLVGII 246

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R  N          +DVM KNPK I  D L   A++ +  HNI+VL+VV++  +
Sbjct: 247 TDGDLRRFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKMEDHNITVLIVVNEENE 306

Query: 326 AIGIVHFLDLLR 337
            IGI+H  D+L+
Sbjct: 307 PIGILHMHDILK 318


>gi|225849730|ref|YP_002729964.1| arabinose 5-phosphate isomerase [Persephonella marina EX-H1]
 gi|225645139|gb|ACO03325.1| arabinose 5-phosphate isomerase [Persephonella marina EX-H1]
          Length = 321

 Score =  261 bits (668), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 140/325 (43%), Positives = 214/325 (65%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+ +     + ++ E+R  ++L+ +L   L   F  AVE I   KG+VV+TG+GKSG +
Sbjct: 1   MKDKSPSQIGKKVLEEER--NALQKTLSA-LDNNFDKAVELILNTKGKVVVTGMGKSGLV 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTPSFF+H AEA HGDLGMI+++D+++ +S SG + EL AI+   +R+ 
Sbjct: 58  GKKIAATLASTGTPSFFLHPAEAIHGDLGMISKEDIVLAISNSGETPELLAIIPTIKRWG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +I+IT+   S +A  +DI L L  E E+CP  LAPT+S+   LA+GDALA+ALLE R 
Sbjct: 118 NKVISITNNKNSTLAKESDIHLYLNIEREACPLNLAPTSSSTATLALGDALAVALLEMRG 177

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  DF   HPGG LG   +  S++MH G+ +P+V     L + + ++SEK FG   +++
Sbjct: 178 FTAEDFARFHPGGSLGRKLMRVSEIMHRGEELPVVHPETELKETVIVMSEKGFGAALIIN 237

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   L GIIT+GD+ R   K   ++    E+ M  NPK I +D L+  A++++ ++NI+V
Sbjct: 238 KDGDLTGIITDGDLRRFIKKGGSIDRSLTEEAMTVNPKYINKDILVVEALEIMERYNITV 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L VV+D +K +G+VH  D+L+ G+I
Sbjct: 298 LPVVED-KKPVGLVHLHDILKSGVI 321


>gi|166711216|ref|ZP_02242423.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 333

 Score =  261 bits (668), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 207/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+++ + +  E    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALANVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|254477232|ref|ZP_05090618.1| arabinose 5-phosphate isomerase [Ruegeria sp. R11]
 gi|214031475|gb|EEB72310.1| arabinose 5-phosphate isomerase [Ruegeria sp. R11]
          Length = 323

 Score =  261 bits (666), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 134/292 (45%), Positives = 191/292 (65%), Gaps = 4/292 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F  AVE +   KGRV+++GIGKSGHIG K+A+TLASTGTP++FVH AEASHGDLGM+++
Sbjct: 32  RFADAVELVLKAKGRVIVSGIGKSGHIGHKIAATLASTGTPAYFVHPAEASHGDLGMVSQ 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++ +S SG + EL  +L + RRF IPLI ++S   S +   AD+ L +P   E+C  
Sbjct: 92  DDVVLAISNSGEAPELANLLAFTRRFGIPLIGLSSRMDSTLMKEADVHLQIPAMGEACGF 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
           G+ P+ S  + LAIGDALAIAL++ R+F   +F   HPGGKLG      SD+MH  D++P
Sbjct: 152 GMVPSISTTLTLAIGDALAIALMKHRDFRPENFRAFHPGGKLGARLSRVSDLMHGDDALP 211

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           LV+   P+ DA+  +S+K FG   VV++   L GIIT+GD+ R+    L+  +  DVM  
Sbjct: 212 LVRQDTPMSDALIEISQKGFGVSGVVNDDGTLIGIITDGDLRRHMDGLLDK-TAADVMTA 270

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLRFGI 340
           NP  I  D++   A+ ++ +  I+ L VVD   K   A G++H  D LR G+
Sbjct: 271 NPTTIASDSMAEEAVAIMNERKITCLFVVDPEAKDGVARGLLHIHDCLRVGL 322


>gi|21232228|ref|NP_638145.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66767643|ref|YP_242405.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|188990759|ref|YP_001902769.1| arabinose-5-phosphate isomerase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21113987|gb|AAM42069.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66572975|gb|AAY48385.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|167732519|emb|CAP50713.1| arabinose-5-phosphate isomerase [Xanthomonas campestris pv.
           campestris]
          Length = 333

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 145/342 (42%), Positives = 206/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L++L +     +   F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEQAALAALGA----RIGAPFAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRPASTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHGGDELPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  + +VM +NPK I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDAQERLIGLFTDGDLRRALDSDIDVRSAGIAEVMTRNPKTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|254427948|ref|ZP_05041655.1| sugar isomerase, KpsF/GutQ family [Alcanivorax sp. DG881]
 gi|196194117|gb|EDX89076.1| sugar isomerase, KpsF/GutQ family [Alcanivorax sp. DG881]
          Length = 322

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/326 (42%), Positives = 202/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    R +  E R + +L+ SL       F  A + +   KGRV++TG+GKSGH+
Sbjct: 1   MSHDHISVGQRVLDIEARAVDALKDSLDA----SFSAACDLMLNAKGRVIVTGMGKSGHV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLA+TLASTGTPSFFVH  EASHGDLGMIT DD+++ LS SG + E+ AIL   +R  
Sbjct: 57  GSKLAATLASTGTPSFFVHPGEASHGDLGMITPDDVVLALSNSGETAEVLAILPVIKRKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ +T   +S +A  +D+ LT+    E+CPH LAPT+S    LA+GDALAIALLE+R 
Sbjct: 117 TGLVGMTGRPQSALAQLSDVHLTVAVAEEACPHNLAPTSSTTAALAMGDALAIALLEARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG  L +   D+MH+G+ +P+V     L +A+  ++ K  G  AV 
Sbjct: 177 FTPEDFALSHPGGSLGRRLLLKVDDIMHAGEQLPVVSADTSLSEALLEMTHKGLGMTAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            +   L GI T+GD+ R F +D++    ++ +VM+ +P  I +  L   A+Q++    I+
Sbjct: 237 HDDGTLAGIFTDGDLRRIFDRDIDIRKATIAEVMVTDPITIAQGHLAAEALQIMETRKIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            LMV DD  K +G  +  DLLR G++
Sbjct: 297 GLMVCDDAGKPLGAFNMQDLLRAGVV 322


>gi|90022816|ref|YP_528643.1| arabinose-5-phosphate isomerase [Saccharophagus degradans 2-40]
 gi|89952416|gb|ABD82431.1| KpsF/GutQ family protein [Saccharophagus degradans 2-40]
          Length = 323

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R+I  E   ++++   +       F  A E I A +GR V+TGIGKSGHI  K+A
Sbjct: 7   IKSAQRTISMEVAAVTAMAQRIDSS----FSQACEIILACQGRTVVTGIGKSGHIAKKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ++LASTGTP+FFVH AEASHGDLGMIT +D++I LS SGSS E+ A+L    R    +I+
Sbjct: 63  ASLASTGTPAFFVHPAEASHGDLGMITSNDVVIALSNSGSSSEMVALLPTLTRVGAKIIS 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +  +  S +A  A++ L +  E E+CP  LAPT+S    L +GDAL +ALLE+R FS  D
Sbjct: 123 LCGKADSPLAQAANVNLDIWIESEACPLDLAPTSSTTASLVMGDALTVALLEARGFSAED 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +  SDVMH+GD +P +     L + +++++ K FG  AV+D+  K
Sbjct: 183 FAFRHPGGTLGRKLLLRVSDVMHAGDQVPKIHRAASLGETLSMMTAKGFGMTAVMDDSDK 242

Query: 263 LKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K +N  S  V DVM  NP+ +    L   A+ L+  + I+ L+V 
Sbjct: 243 LVGIFTDGDLRRCVDKGINIGSAIVGDVMTPNPRTVQSRMLAAQALNLMETNKITALIVE 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+ QKA+G++H  DLLR G++
Sbjct: 303 DENQKAVGVLHMHDLLRAGLV 323


>gi|58040277|ref|YP_192241.1| capsule expression protein [Gluconobacter oxydans 621H]
 gi|58002691|gb|AAW61585.1| Capsule expression protein [Gluconobacter oxydans 621H]
          Length = 332

 Score =  260 bits (665), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/322 (47%), Positives = 207/322 (64%), Gaps = 2/322 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  AL+++  E+ GL +LE +L G L   F  AV +I   +GR+++TGIGKSGHI  
Sbjct: 10  RTALDSALQTVSIEREGLQALEHALSGPLGEAFCEAVNRIAESEGRLIVTGIGKSGHIAR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TLASTGTPS F+H AEA+HGDLGM+   DLI+  S SG S EL AIL YA R +  
Sbjct: 70  KVQATLASTGTPSLFLHPAEAAHGDLGMVAPGDLILAFSNSGESTELAAILAYAARQNHC 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS   S +A  ++I L LP   E+CP GLAPTTS ++QLA+GDALA+ALLE R F+
Sbjct: 130 VIAITSVGTSALARASEIPLVLPSSTEACPMGLAPTTSTLLQLALGDALALALLEKRGFT 189

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG      SD+MH+GD++PL +   PL   I  ++ K FGC+ V D+ 
Sbjct: 190 ARDFGAFHPGGLLGARLRPISDLMHTGDALPLGQGSLPLRSVILEMTRKSFGCMGVTDDN 249

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLM 318
             L+G+IT+ D+ R    DL+T + +DVM   P      TL    +QL+  R+  I+ L 
Sbjct: 250 GVLQGLITDADLRRALSGDLDTTTAKDVMNAAPVTATPTTLAQDVLQLMNQRERPITSLF 309

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           +VD+ ++  GIVH  DLLR G+
Sbjct: 310 IVDEDRRPTGIVHVHDLLRSGL 331


>gi|188578109|ref|YP_001915038.1| arabinose 5-phosphate isomerase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522561|gb|ACD60506.1| arabinose 5-phosphate isomerase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 333

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 202/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V    R +  E+  L+++ + +  E    F  A   + A +GRVV TG+GKSGH+  K
Sbjct: 15  SLVASGQRVLEIEREALANVGARIGSE----FAAACRLVLASRGRVVATGMGKSGHVARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE++ +L   +R   P+
Sbjct: 71  IAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 131 IAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTASLAMGDALAVALLDARGFTA 190

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG  L +  +DVMH+GD +P V+    L +A+  +S KR G  AVVD  
Sbjct: 191 DDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSEALMEMSRKRLGMTAVVDND 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D L   A +L+  + I+ L+
Sbjct: 251 ERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLI 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD  Q+A+G ++  DLLR  ++
Sbjct: 311 VVDAQQRAVGALNIHDLLRAKVV 333


>gi|89067363|ref|ZP_01154876.1| Sugar phosphate Isomerase [Oceanicola granulosus HTCC2516]
 gi|89046932|gb|EAR52986.1| Sugar phosphate Isomerase [Oceanicola granulosus HTCC2516]
          Length = 322

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 139/313 (44%), Positives = 193/313 (61%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E   LS L  SL   L+     A+E + A +GRVV++G+GKSGHI  K+A+TLASTG
Sbjct: 15  VATEAEALSILAESLGPGLAE----ALELVLAARGRVVVSGMGKSGHIARKVAATLASTG 70

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF IPLI + +   S
Sbjct: 71  TPAQFVHPAEASHGDLGMLTRGDVVLVLSNSGETTELADLIAYTRRFGIPLIGVAARAAS 130

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   AD+ L LP+  E+C  G+ PTTS  M LA+GDA+A+AL+E R F+   F   HPG
Sbjct: 131 TLMRQADVRLVLPEAREACGTGVVPTTSTTMMLALGDAIAVALMEHRRFTPEMFRDFHPG 190

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G+LG      SD+MHSGD++PL     P+ DA+  +S+K FG + V      L GI+T+G
Sbjct: 191 GRLGARLSKVSDLMHSGDALPLAGQATPMSDALLTISQKGFGVLGVTGANGHLAGIVTDG 250

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIG 328
           D+ R+    L   S  DVM   P+ I    L   A++++    I+ L VVD     + +G
Sbjct: 251 DLRRHMDGLLER-SAGDVMTPEPRTIGPGALAEEAVRVMNAQQITCLFVVDPPGSGRVVG 309

Query: 329 IVHFLDLLRFGII 341
           ++H  D LR GI+
Sbjct: 310 LIHIHDCLRAGIV 322


>gi|255066046|ref|ZP_05317901.1| arabinose 5-phosphate isomerase [Neisseria sicca ATCC 29256]
 gi|255049591|gb|EET45055.1| arabinose 5-phosphate isomerase [Neisseria sicca ATCC 29256]
          Length = 324

 Score =  260 bits (664), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 205/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL  QF  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----ELDEQFVRAADALLHCKGRVVITGMGKSGHIGRKIAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLICITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  D++P V++G PL +AI  +SEK  G +AV DE  +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDDALPAVRLGTPLKEAIVSMSEKGLGMLAVTDEQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +    + L+V+++M  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 254 RRLFQQRDRFDGLTVDEIMHPSPKTIPAERLATEALKVMQANHVNGLLVTDADGVLTGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|110677767|ref|YP_680774.1| arabinose 5-phosphate isomerase [Roseobacter denitrificans OCh 114]
 gi|109453883|gb|ABG30088.1| arabinose 5-phosphate isomerase [Roseobacter denitrificans OCh 114]
          Length = 320

 Score =  260 bits (664), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 140/316 (44%), Positives = 195/316 (61%), Gaps = 7/316 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R I  E   L  LE S+       F  AVE + A  GR+++ G+GKSGHI  K+A+TL
Sbjct: 9   ARRVIRIEIDALQQLEQSIDDS----FAKAVELMIAATGRIIVCGMGKSGHIARKIAATL 64

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+ FVH AEASHGDLGM+   D++IVLS SG + EL  ++ Y RRFSIP+I + S
Sbjct: 65  ASTGTPAHFVHPAEASHGDLGMMGAGDVVIVLSNSGETPELADVIAYTRRFSIPMIGVAS 124

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +   +D+ L LP+  E+C  G+ PT+S  M LA+GDALA+AL+E R F+   F  
Sbjct: 125 RPESTLLRQSDVALVLPRAQEACGTGIVPTSSTTMTLALGDALAVALMEHRKFTPEHFRA 184

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG      SD+MH+G ++P+V    P+ +A+  + +K FG VAV D    L+GI
Sbjct: 185 FHPGGKLGAQLSKVSDLMHTGRAVPVVPGDAPMSEALREIGQKGFGVVAVSDPQGLLQGI 244

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQ 324
           IT GDI R+    L +    +VM  +P  I  D L   A+ ++    I+ L+VVD  + +
Sbjct: 245 ITNGDISRHM-DGLASFEAHNVMTPSPVTIPPDALAEQAVGIMNDKKITCLLVVDPQEPR 303

Query: 325 KAIGIVHFLDLLRFGI 340
           K +G++H  D LR G+
Sbjct: 304 KLVGLIHIHDCLRIGL 319


>gi|163782859|ref|ZP_02177855.1| polysialic acid capsule expression protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881980|gb|EDP75488.1| polysialic acid capsule expression protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 323

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 145/317 (45%), Positives = 200/317 (63%), Gaps = 8/317 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R I  E RG+  L+ SL GE    F  AVE I   +G+V++TGIGKSGH+G K+AST 
Sbjct: 10  ARRVIEEEVRGIERLKESL-GE---DFLRAVELILNCEGKVIVTGIGKSGHVGRKIASTF 65

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+ F+H +EA HGDLG+I R D++I +S SG S E+  +L Y R    PLIAIT+
Sbjct: 66  ASTGTPAHFLHPSEALHGDLGVIDRGDVVIAISNSGESAEVVQVLPYIRMLGNPLIAITN 125

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A ++D+ L L  + E+CP  LAPTTS+   L +GDALA+ +LE + F+E DF +
Sbjct: 126 RKNSTLAKYSDVHLFLNIDREACPLQLAPTTSSTATLVLGDALAMTVLELKGFTEKDFAL 185

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG LG       D+ H+G+ +P+V+   P+ + +  +S K FG  AVVD+  KL GI
Sbjct: 186 RHPGGSLGRRLRLVRDLYHTGEELPVVREDTPMGEVVLEMSSKGFGATAVVDDSGKLVGI 245

Query: 267 ITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GD+ R F K   DLN     DVM  NPK    + +   A++ + +H I+VL+ VD+ 
Sbjct: 246 ITDGDL-RRFVKGGGDLNRSVARDVMTPNPKTTKAEEMALEALRRMEEHKITVLIAVDEE 304

Query: 324 QKAIGIVHFLDLLRFGI 340
            K  GI+H  D+LR  I
Sbjct: 305 NKPEGIIHLHDILRAEI 321


>gi|84622845|ref|YP_450217.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|122879082|ref|YP_199928.6| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84366785|dbj|BAE67943.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 333

 Score =  259 bits (663), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 202/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V    R +  E+  L+++ + +  E    F  A   + A +GRVV TG+GKSGH+  K
Sbjct: 15  SLVASGQRVLEIEREALANVGARIGSE----FAAACRLVLASRGRVVATGMGKSGHVARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE++ +L   +R   P+
Sbjct: 71  IAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 131 IAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTASLAMGDALAVALLDARGFTA 190

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG  L +  +DVMH+GD +P V+    L +A+  +S KR G  AVVD  
Sbjct: 191 DDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSEALMEMSRKRLGMTAVVDND 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D L   A +L+  + I+ L+
Sbjct: 251 ERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLI 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD  Q+A+G ++  DLLR  ++
Sbjct: 311 VVDAQQRAVGALNIHDLLRAKVV 333


>gi|224826293|ref|ZP_03699395.1| KpsF/GutQ family protein [Lutiella nitroferrum 2002]
 gi|224601394|gb|EEG07575.1| KpsF/GutQ family protein [Lutiella nitroferrum 2002]
          Length = 326

 Score =  259 bits (662), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 146/301 (48%), Positives = 201/301 (66%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+  L   F  A++ I A  GR+V+TGIGKSGHIG K+A+TLASTGTP+FFVH AEA+H
Sbjct: 26  ALRARLDGAFLAAIDAILACAGRLVVTGIGKSGHIGRKIAATLASTGTPAFFVHPAEAAH 85

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT  D+++ LS SG SDE+ A+L   +R  I LIA+T    S +A  ADI L   
Sbjct: 86  GDLGMITDGDVLLALSNSGESDEVIALLPALKRKDITLIAMTGRPDSTLAREADIHLDAA 145

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP GLAPT+S    LA+GDALA+ LLE+R+F E DF + HPGG LG  L V   D
Sbjct: 146 VEMEACPLGLAPTSSTTAALALGDALAVTLLEARSFREEDFALSHPGGSLGRRLLVHVRD 205

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MH+GD++P+V+ G  L DA+  ++ K  G  AVVD    L GI T+GD+ R   K  DL
Sbjct: 206 LMHAGDTLPVVQSGTTLKDALLEMTRKGLGMTAVVDASANLVGIFTDGDLRRTLDKTLDL 265

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L+++DVM + P+ I  + L + A++L+  H ++ L+VVDD    +G ++  DLL+  I
Sbjct: 266 SGLAIDDVMFRQPRTISAERLASEAVKLMETHKVNGLLVVDDAGHLVGALNMHDLLQARI 325

Query: 341 I 341
           +
Sbjct: 326 V 326


>gi|325145147|gb|EGC67429.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240013]
          Length = 326

 Score =  259 bits (662), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 203/312 (65%), Gaps = 7/312 (2%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP
Sbjct: 19  AEAEGLREIAA----ELDKNFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTP 74

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +
Sbjct: 75  AFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTM 134

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G 
Sbjct: 135 ARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGS 194

Query: 213 LGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD
Sbjct: 195 LGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGD 254

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG 
Sbjct: 255 LRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGA 314

Query: 330 VHFLDLLRFGII 341
           ++  DLL   I+
Sbjct: 315 LNMHDLLAARIV 326


>gi|298370088|ref|ZP_06981404.1| arabinose 5-phosphate isomerase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281548|gb|EFI23037.1| arabinose 5-phosphate isomerase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 325

 Score =  259 bits (662), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 144/329 (43%), Positives = 211/329 (64%), Gaps = 9/329 (2%)

Query: 18  LMKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           +M N+   +  A R +  E  GL+ +  +L G     F  A + +   KGRVVITG+GKS
Sbjct: 1   MMGNTEQYLDWARRVLRTEALGLNEIADALDG----GFVRAADALLHCKGRVVITGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+G K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +
Sbjct: 57  GHVGRKIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIMPALK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R ++ LI IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL 
Sbjct: 117 RKNVTLIGITARPASTLARHADIHITAAVSKEACPLGLAPTTSTTAVMALGDALAVVLLR 176

Query: 196 SRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF + HP G LG  L +  +D+MH GD++P V  G  L +AI  +SEK  G +
Sbjct: 177 ARAFTPDDFALSHPAGSLGKRLLLRVADIMHGGDALPAVVSGTLLKEAIVRMSEKGLGML 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AV DE  +LKG++T+GD+ R F +  N   L+V+D+M  +PK I  D L T A++ ++ +
Sbjct: 237 AVTDEAGRLKGVLTDGDLRRLFQQRDNFAGLTVDDIMHTSPKTITADKLATEALKHMQAN 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +I+ L+V +      G ++  DLL   I+
Sbjct: 297 HINGLLVTEADGTLTGALNMHDLLMARIV 325


>gi|294338654|emb|CAZ86983.1| Arabinose 5-phosphate isomerase [Thiomonas sp. 3As]
          Length = 332

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 147/322 (45%), Positives = 193/322 (59%), Gaps = 4/322 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           VQ A  ++  E R L SL   L    LS  F  AV+ I    GRVV++G+GKSGH+G K+
Sbjct: 11  VQLARDTLDIEARALLSLRERLAAPPLSSAFAQAVQCILRSGGRVVVSGMGKSGHVGRKI 70

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T ASTGTP++FVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R    LI
Sbjct: 71  AATFASTGTPAYFVHPAEASHGDLGMVTRDDVFLALSNSGETEELTRIVPQVKRLGATLI 130

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           ++T    S +A HADI+L    E E+CP  LAPT S   QLA+GDALA+ALL++R F   
Sbjct: 131 SMTGRTDSTLARHADILLDCAVEQEACPLNLAPTASTTAQLALGDALAVALLDARGFGPE 190

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L     DVM S +++P V    P   A+  ++ K  G  AVVD   
Sbjct: 191 DFARTHPGGSLGRKLLTHVRDVMRSAEAVPSVTEEAPFTAALMEITRKGLGMTAVVDAHG 250

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L GIIT+GD+ R   K  +LNTL  +  M   P  I  D L   A+QL+ Q+ I+ L+V
Sbjct: 251 VLAGIITDGDLRRLIEKGANLNTLQAQQAMHPQPHTIGPDALAVEAVQLMEQYRINQLLV 310

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD   K +G ++  DL    +I
Sbjct: 311 VDAQGKPVGALNMHDLFAAKVI 332


>gi|325916426|ref|ZP_08178698.1| KpsF/GutQ family protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325537346|gb|EGD09070.1| KpsF/GutQ family protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 333

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 144/342 (42%), Positives = 207/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRPGSSLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHGGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD+  +L G+ T+GD+ R    D++  S  + +VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDDDGRLIGLFTDGDLRRALDSDIDVRSAGIAEVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|317046701|ref|YP_004114349.1| KpsF/GutQ family protein [Pantoea sp. At-9b]
 gi|316948318|gb|ADU67793.1| KpsF/GutQ family protein [Pantoea sp. At-9b]
          Length = 326

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 199/311 (63%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +    F  A E I A +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 21  EREGLEQLDQYINDD----FSRACEMIFACRGKVVVMGMGKSGHIGKKMAATFASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++ DD+++ +S SG S+E+ A++   +R  + LI ITS   S + 
Sbjct: 77  FFVHPAEASHGDLGMVSTDDVVVAISNSGESNEILALIPVLKRQKVQLICITSRADSAMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPTTS    L +GDALA+ALLE+R F++ DF + HPGG L
Sbjct: 137 RAADVHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLEARGFTQEDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD IP V     L DA+  ++ K  G   +VD+  K++GI T+GD+
Sbjct: 197 GRKLLLHVSDIMHSGDEIPHVSRDASLRDALLEITRKNLGLTVIVDDLMKIEGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D  + S++DVM +    +  + L   A+ L++  NI+ L+V DD  + +G++
Sbjct: 257 RRVFDMGIDFQSASIKDVMTRGGIRVRPNMLAVDALNLMQNKNITALLVADD-DRLLGVI 315

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 316 HMHDMLRAGVV 326


>gi|294625300|ref|ZP_06703938.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|294665377|ref|ZP_06730666.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292600421|gb|EFF44520.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292604836|gb|EFF48198.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 333

 Score =  259 bits (661), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 143/342 (41%), Positives = 206/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + + GE    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGGE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD+   L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDDDGHLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|325134933|gb|EGC57565.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M13399]
 gi|325141001|gb|EGC63507.1| arabinose 5-phosphate isomerase [Neisseria meningitidis CU385]
 gi|325199546|gb|ADY95001.1| arabinose 5-phosphate isomerase [Neisseria meningitidis H44/76]
          Length = 326

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 203/312 (65%), Gaps = 7/312 (2%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP
Sbjct: 19  AEAEGLREIAA----ELDKNFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTP 74

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +
Sbjct: 75  AFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTM 134

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G 
Sbjct: 135 ARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGS 194

Query: 213 LGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD
Sbjct: 195 LGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGD 254

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG 
Sbjct: 255 LRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGA 314

Query: 330 VHFLDLLRFGII 341
           ++  DLL   I+
Sbjct: 315 LNMHDLLAARIV 326


>gi|126724659|ref|ZP_01740502.1| Sugar phosphate Isomerase [Rhodobacterales bacterium HTCC2150]
 gi|126705823|gb|EBA04913.1| Sugar phosphate Isomerase [Rhodobacterales bacterium HTCC2150]
          Length = 323

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 137/322 (42%), Positives = 192/322 (59%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           KN  +    R +  E   LS L +SL       F  AV+ I    GRV++ G+GKSGHIG
Sbjct: 6   KNLLLDVGRRVVSREAEALSKLNASLDQS----FADAVQMILNATGRVIVCGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+ FVH AEASHGDLGM+   D+++VLS SG + EL  ++ Y RRF I
Sbjct: 62  RKIAATFASTGTPAHFVHPAEASHGDLGMMAAGDVVLVLSNSGETPELADVISYTRRFQI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I +     S +   AD+ L LP   E+C  G+ PTTS  M LA+GDALAIAL+E R F
Sbjct: 122 PMIGVAGRINSTLLNQADVSLVLPAAEEACDQGIVPTTSTTMTLALGDALAIALMEHRKF 181

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  +F   HPGGKLG      +D+MH GD +P V+ G  + +A+  +S+K FG   V+D 
Sbjct: 182 TPENFRQFHPGGKLGAQLSTVNDLMHRGDELPFVESGSKMSEALLTISQKGFGVAGVLDS 241

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L G IT+GD+ R+    L+ L+ ++VM ++P+ I    +   A+ ++    I+ L V
Sbjct: 242 NGTLLGAITDGDLRRHMQGLLD-LTADEVMTRDPRTIASTAMAQEAVAVMNTMKITCLFV 300

Query: 320 VDDC-QKAIGIVHFLDLLRFGI 340
            D   Q  +GI+H  D LR G+
Sbjct: 301 QDAPDQTPVGILHIHDCLRAGV 322


>gi|206889216|ref|YP_002249743.1| arabinose 5-phosphate isomerase [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741154|gb|ACI20211.1| arabinose 5-phosphate isomerase [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 322

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 204/322 (63%), Gaps = 8/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A + +  E   L +L+  +  +    F  AVE I   KGRVV+TGIGKSG IG K+A
Sbjct: 5   IEIAQKVLTIEAESLQTLKERINED----FLKAVEIIHNSKGRVVVTGIGKSGLIGRKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFF+H AEASHGDLGM+T +D++I +S SG +DEL  ++ + + F++ ++A
Sbjct: 61  ATLASTGTPSFFMHPAEASHGDLGMVTEEDVVIAISNSGETDELIRLIPFLKYFNVKIVA 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD VL +  + E+CP G  PT S    LA+GDALA+AL+    F + D
Sbjct: 121 ITGNTQSTLAKQADAVLDVSVKEEACPFGFIPTASTTATLAMGDALAVALIMRNGFKKED 180

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  +     D+MH+GD +P+      ++DA+  +S KR G V VVDE ++
Sbjct: 181 FAFFHPGGSLGRRMLTKVKDLMHTGDELPVCFPQTVMLDAVLEISSKRLGVVVVVDENKR 240

Query: 263 LKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + GIIT+GD+ R    + KDL  L    +M  NPK I ED L  VA+ ++++++I+ L+V
Sbjct: 241 ILGIITDGDVRRGVQRYGKDLFDLKACQIMTINPKTINEDELAAVALSVMQKYSITSLVV 300

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
            +      G++H  D+L+ GI+
Sbjct: 301 PNSDGTLEGLIHIHDILKKGIL 322


>gi|15676267|ref|NP_273401.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis MC58]
 gi|7225574|gb|AAF40795.1| sugar isomerase, KpsF/GutQ family [Neisseria meningitidis MC58]
 gi|316984358|gb|EFV63332.1| arabinose 5-phosphate isomerase [Neisseria meningitidis H44/76]
          Length = 324

 Score =  259 bits (661), Expect = 6e-67,   Method: Compositional matrix adjust.
 Identities = 140/312 (44%), Positives = 203/312 (65%), Gaps = 7/312 (2%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP
Sbjct: 17  AEAEGLREIAA----ELDKNFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTP 72

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +
Sbjct: 73  AFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTM 132

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G 
Sbjct: 133 ARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGS 192

Query: 213 LGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD
Sbjct: 193 LGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGD 252

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG 
Sbjct: 253 LRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGA 312

Query: 330 VHFLDLLRFGII 341
           ++  DLL   I+
Sbjct: 313 LNMHDLLAARIV 324


>gi|289667909|ref|ZP_06488984.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 333

 Score =  258 bits (660), Expect = 7e-67,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGSD----FSAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATFASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRASSTLANAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|304386600|ref|ZP_07368888.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ATCC 13091]
 gi|304339429|gb|EFM05501.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ATCC 13091]
          Length = 326

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----ELDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDVQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|261364295|ref|ZP_05977178.1| arabinose 5-phosphate isomerase [Neisseria mucosa ATCC 25996]
 gi|288567545|gb|EFC89105.1| arabinose 5-phosphate isomerase [Neisseria mucosa ATCC 25996]
          Length = 324

 Score =  258 bits (660), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 204/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKIAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLICITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  D++P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDDALPAVRLGTPLKEAIVSMSEKGLGMLAVTDNQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +    + L+V+++M  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 254 RRLFQQRDRFDGLTVDEIMHPSPKTIPAERLATEALKVMQANHVNGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|299068028|emb|CBJ39242.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum CMR15]
          Length = 327

 Score =  258 bits (659), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 137/300 (45%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 28  LKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVHPAEASHG 87

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL AIL   +R    LIA+T   +S +A HAD+VL    
Sbjct: 88  DLGMVTRDDVFIGFSNSGEVSELTAILPLVKRLGARLIAVTGNPQSSLAQHADVVLNSRV 147

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   Q+A+GDALA+ALL++R F  +DF   HPGG LG  L     D+
Sbjct: 148 EVEACPLNLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDI 207

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M  GD++P V    PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D  
Sbjct: 208 MRQGDAVPRVTADTPLSQALMEITRKGMAMTAVVDAAGRAVGVFTDGDLRRLLETPRDWR 267

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T+ + +VM +NP  +  D L   A++++  H I+ L+VVD   + +G +H  DL R  +I
Sbjct: 268 TVPMHEVMHRNPHAVGPDQLAVEAVEVMETHRINQLLVVDAAGQLMGALHIHDLTRAKVI 327


>gi|325132906|gb|EGC55583.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M6190]
 gi|325138891|gb|EGC61441.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ES14902]
          Length = 326

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 203/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EEEGLREIAT----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|159046128|ref|YP_001534922.1| arabinose-5-phosphate isomerase [Dinoroseobacter shibae DFL 12]
 gi|157913888|gb|ABV95321.1| arabinose-5-phosphate isomerase [Dinoroseobacter shibae DFL 12]
          Length = 320

 Score =  258 bits (659), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/322 (44%), Positives = 196/322 (60%), Gaps = 8/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  A R I  E  GL+ L + L       F  AV+ I + KGRV+++G+GKSGHI  
Sbjct: 4   DTFLDIARRVIAVEAEGLAQLAAGLDD----SFARAVDTILSAKGRVIVSGMGKSGHIAR 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+ FVH AEASHGDLGM+   D+++VLS SG + EL  ++ Y RRF IP
Sbjct: 60  KMAATFASTGTPAHFVHPAEASHGDLGMMAAGDVVLVLSNSGETPELADLVAYTRRFRIP 119

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI + S   S +   +D+ L LPK PE+C  G+ PTTS  M LA+GDALA+AL+E R FS
Sbjct: 120 LIGVASNPDSTLLRQSDVALVLPKAPEACGTGIVPTTSTTMTLALGDALAVALMEHREFS 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG       D+MH G  +PL+     + DA+  +S+K FG V V  +G
Sbjct: 180 PQNFRDFHPGGKLGARLSKVGDLMHRGTELPLIAEDAAMGDALLEISQKGFGVVGVTRDG 239

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L G+IT+GD+ R+    L  L+  DVM ++P  I  D L   A+ ++    I+ L VV
Sbjct: 240 L-LTGVITDGDLRRHMDGLLG-LAAGDVMTRDPLTITPDALAEEAVAVMNARKITCLFVV 297

Query: 321 -DDCQKA-IGIVHFLDLLRFGI 340
            +D  KA  G +H  D LR GI
Sbjct: 298 PEDGPKAPAGFLHIHDCLRAGI 319


>gi|300705233|ref|YP_003746836.1| arabinose-5-phosphate isomerase [Ralstonia solanacearum CFBP2957]
 gi|299072897|emb|CBJ44253.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum CFBP2957]
          Length = 327

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/300 (45%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 28  LKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVHPAEASHG 87

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL AIL   +R    LIA+T   +S +A HAD+VL    
Sbjct: 88  DLGMVTRDDVFIGFSNSGEVSELTAILPLIKRLGAKLIAVTGNPQSSLAQHADVVLNSRV 147

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   Q+A+GDALA+ALL++R F  +DF   HPGG LG  L     DV
Sbjct: 148 EVEACPLNLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDV 207

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M  G+++P V    PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D  
Sbjct: 208 MRQGEAVPRVAEDTPLSQALMEITRKGMAMTAVVDAEGRAAGVFTDGDLRRLLETPRDWR 267

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + + +VM +NP+ +  D L   A++++  H I+ L+VVD   + IG +H  DL R  +I
Sbjct: 268 AVPIHEVMHRNPRAVGPDQLAVEAVEMMETHRINQLLVVDAAGQLIGALHIHDLTRAKVI 327


>gi|254805612|ref|YP_003083833.1| putative sugar isomerase [Neisseria meningitidis alpha14]
 gi|254669154|emb|CBA07840.1| putative sugar isomerase [Neisseria meningitidis alpha14]
 gi|325202829|gb|ADY98283.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240149]
 gi|325208822|gb|ADZ04274.1| arabinose 5-phosphate isomerase [Neisseria meningitidis NZ-05/33]
          Length = 326

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|121635512|ref|YP_975757.1| hypothetical protein NMC1816 [Neisseria meningitidis FAM18]
 gi|120867218|emb|CAM10987.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
          Length = 324

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 203/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EEEGLREIAT----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|207727854|ref|YP_002256248.1| sugar isomerase (sis) protein [Ralstonia solanacearum MolK2]
 gi|207742259|ref|YP_002258651.1| sugar isomerase (sis) protein [Ralstonia solanacearum IPO1609]
 gi|206591095|emb|CAQ56707.1| sugar isomerase (sis) protein [Ralstonia solanacearum MolK2]
 gi|206593647|emb|CAQ60574.1| sugar isomerase (sis) protein [Ralstonia solanacearum IPO1609]
          Length = 369

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 137/300 (45%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 70  LKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVHPAEASHG 129

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL AIL   +R    LIA+T   +S +A HAD+VL    
Sbjct: 130 DLGMVTRDDVFIGFSNSGEVSELTAILPLIKRLGAKLIAVTGNPQSSLAQHADVVLNSRV 189

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   Q+A+GDALA+ALL++R F  +DF   HPGG LG  L     DV
Sbjct: 190 EVEACPLNLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDV 249

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M  G+++P V    PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D  
Sbjct: 250 MRQGEAVPRVTEDTPLSQALMEITRKGMAMTAVVDAEGRAAGVFTDGDLRRLLETPRDWR 309

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + + +VM +NP+ +  D L   A++++  H I+ L+VVD   + IG +H  DL R  +I
Sbjct: 310 AVPIHEVMHRNPRAVGPDQLAVEAVEMMETHRINQLLVVDAAGQLIGALHIHDLTRAKVI 369


>gi|254522229|ref|ZP_05134284.1| arabinose 5-phosphate isomerase [Stenotrophomonas sp. SKA14]
 gi|219719820|gb|EED38345.1| arabinose 5-phosphate isomerase [Stenotrophomonas sp. SKA14]
          Length = 333

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 145/329 (44%), Positives = 206/329 (62%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            S+   S V    R    E++ L+++ + L GE +FQ  C  + I + +GRVV TG+GKS
Sbjct: 9   RSVDPASLVASGRRVFDIEQQALNAVAARL-GE-AFQQAC--QAILSSRGRVVATGMGKS 64

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+F+VH  EA HGDLGMIT DD+++ LS+SG SDE+  +L   +
Sbjct: 65  GHIARKIAATLASTGTPAFYVHPGEAGHGDLGMITEDDVVLALSYSGESDEVLMLLPVLK 124

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    LI++T   +S +A  ADI L +    E+CP  LAPT+S    LA+GDALA+ALL+
Sbjct: 125 RQGNLLISMTGRPQSSLASAADIHLDVSVPAEACPLDLAPTSSTTASLAMGDALAVALLD 184

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF   HP G LG  L +  +DVMH+GD +P V+ G  L +A+  +S KR G  
Sbjct: 185 ARGFTADDFARSHPAGSLGRRLLLHITDVMHTGDDLPRVEAGASLSEALMEMSRKRLGMT 244

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AVVD    L G+ T+GD+ R      D+ T  + DVM +NP+ I  D L   A +L+  H
Sbjct: 245 AVVDADGVLIGLFTDGDLRRALDSALDVRTAKIADVMTRNPRTIGADQLAVEAARLMETH 304

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 305 KITGLIVVDGQGRAVGALNIHDLLRARVV 333


>gi|255264200|ref|ZP_05343542.1| sugar isomerase, KpsF/GutQ family [Thalassiobium sp. R2A62]
 gi|255106535|gb|EET49209.1| sugar isomerase, KpsF/GutQ family [Thalassiobium sp. R2A62]
          Length = 322

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 197/323 (60%), Gaps = 7/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           + + +  A R I  E   L++L   L GE    F  AVE +   KGRV+++G+GKSGHI 
Sbjct: 4   RRTFLATAHRVITDEAAALTTLADGL-GE---SFADAVELMLNTKGRVIVSGMGKSGHIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+ FVH AEASHGDLGM+T+DD+++VLS SG + EL  ++ Y RRF I
Sbjct: 60  RKIAATLASTGTPAHFVHPAEASHGDLGMMTKDDVVLVLSNSGETPELADLIAYTRRFGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I +     S +    D+ L LP   E+C  G  PT S  M LA+GDALAIAL+E R+F
Sbjct: 120 QMIGVAKAANSNLMRQTDVALMLPDMGEACGTGTVPTNSTSMTLALGDALAIALMEHRSF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  +F   HPGGKLG       D+MH G ++P +    P+ D + ++S+K FG V V + 
Sbjct: 180 TPENFRDFHPGGKLGARLSKVRDLMHDGAALPTIAFDSPMSDTLLMISQKGFGVVGVTNA 239

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L GI+T+GD+ R+    L  ++  +VM K+P  I  D L   A+ ++ +  I+ L V
Sbjct: 240 DDYLVGIVTDGDLRRHMDGLLG-MTAGEVMTKSPTTIGPDALAEAAVAVMNERKITCLFV 298

Query: 320 V--DDCQKAIGIVHFLDLLRFGI 340
           V  D  Q+A+GI+H  D LR GI
Sbjct: 299 VDPDGSQRAVGILHIHDCLRAGI 321


>gi|300692612|ref|YP_003753607.1| arabinose-5-phosphate isomerase [Ralstonia solanacearum PSI07]
 gi|299079672|emb|CBJ52349.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum PSI07]
          Length = 327

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/300 (46%), Positives = 185/300 (61%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 28  LKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVHPAEASHG 87

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL AIL   +R    LIA+T   +S +A HADIVL    
Sbjct: 88  DLGMVTRDDVFIGFSNSGEVSELTAILPLVKRLGAKLIAVTGNPQSSLAQHADIVLNSRV 147

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   Q+A+GDALA+ALL++R F  +DF   HPGG LG  L     DV
Sbjct: 148 EVEACPLNLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDV 207

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M  GD++P V    PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D  
Sbjct: 208 MRQGDAVPRVTEDTPLSQALMEITRKGMAMTAVVDAEGRAVGVFTDGDLRRLLETPRDWR 267

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + + +VM +NP+ +  D L   A++++  H I+ L+VVD   +  G +H  DL R  +I
Sbjct: 268 AVPIHEVMHRNPRAVGPDQLAVEAVEVMETHRINQLLVVDAAGQLTGALHIHDLTRAKVI 327


>gi|161870717|ref|YP_001599890.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis 053442]
 gi|161596270|gb|ABX73930.1| sugar isomerase, KpsF/GutQ family [Neisseria meningitidis 053442]
          Length = 324

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 203/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|325128937|gb|EGC51791.1| arabinose 5-phosphate isomerase [Neisseria meningitidis N1568]
          Length = 326

 Score =  258 bits (658), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 203/311 (65%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|289664526|ref|ZP_06486107.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 333

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIERDALASVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATFASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRASSTLANAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|256821878|ref|YP_003145841.1| KpsF/GutQ family protein [Kangiella koreensis DSM 16069]
 gi|256795417|gb|ACV26073.1| KpsF/GutQ family protein [Kangiella koreensis DSM 16069]
          Length = 326

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 198/301 (65%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L+ +L   F  A  K+   +G+VV+ G+GKSGHIGSK+A+TLASTGTP+FFVH AEAS
Sbjct: 26  TNLKQQLDKTFVAACHKLLNCQGKVVVIGMGKSGHIGSKMAATLASTGTPAFFVHPAEAS 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D++I LS SG + E+ A+L   +R  I LI+ITS + S +A  +D+ + +
Sbjct: 86  HGDLGMIGELDVVIALSNSGETHEVTALLPVIKRRGIELISITSNDSSSLAKASDLHIKV 145

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CPH LAPT S    LA+GDA+A++LLE+R F+ +DF + HPGG LG  L +   
Sbjct: 146 QVEQEACPHNLAPTASTTAVLALGDAMAVSLLEARGFTPDDFALSHPGGSLGKRLILQVD 205

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           D+MHSG S P VK    + +A+  +++KR G   V D+   L GI T+GD+ R F +D++
Sbjct: 206 DLMHSGSSFPSVKPDVSIRNALFEMTDKRMGMTTVTDKQGNLLGIFTDGDLRRAFERDVD 265

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               + DVM K  K +   TL   A+ L+ + +I+ L+VVD   K +G++H  DLL+ G+
Sbjct: 266 IDAPIGDVMTKGCKTVKTQTLAVDAVNLMEESSITSLIVVDSNDKPLGVIHMHDLLKAGV 325

Query: 341 I 341
           +
Sbjct: 326 V 326


>gi|58425506|gb|AAW74543.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 523

 Score =  257 bits (657), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 202/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V    R +  E+  L+++ + +  E    F  A   + A +GRVV TG+GKSGH+  K
Sbjct: 205 SLVASGQRVLEIEREALANVGARIGSE----FAAACRLVLASRGRVVATGMGKSGHVARK 260

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE++ +L   +R   P+
Sbjct: 261 IAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPI 320

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 321 IAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTASLAMGDALAVALLDARGFTA 380

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG  L +  +DVMH+GD +P V+    L +A+  +S KR G  AVVD  
Sbjct: 381 DDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSEALMEMSRKRLGMTAVVDND 440

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D L   A +L+  + I+ L+
Sbjct: 441 ERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLI 500

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD  Q+A+G ++  DLLR  ++
Sbjct: 501 VVDAQQRAVGALNIHDLLRAKVV 523


>gi|227824361|ref|ZP_03989193.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904860|gb|EEH90778.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 330

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 137/296 (46%), Positives = 198/296 (66%), Gaps = 6/296 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A+E I    GR+++TG+GKSG IG K+A+TLASTGTPSFF+H AEA HGDLGM+T+
Sbjct: 35  HFGAALEMILHCPGRIIVTGMGKSGIIGRKIAATLASTGTPSFFLHPAEAIHGDLGMVTQ 94

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+I+ +S SG + E+  IL   RR    +IA+  + +S +A +ADIVL +  + E+CP 
Sbjct: 95  GDVILAISNSGETGEVLHILPSIRRIGARIIAMVGKPESTLAKNADIVLDVGVKKEACPL 154

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    LA GDALA+ LL +R+F+EN F + HPGG LG  L +   D+MH GD  
Sbjct: 155 GLAPTSSTTATLAFGDALAMELLSARHFTENQFAIYHPGGSLGRKLLLTVGDIMHKGDEN 214

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDV 288
           PLV     + DA+ ++++K  G V+VVD   +LKG++T+GDI R F K L++L+  V ++
Sbjct: 215 PLVPSDMTVKDALFVITDKGLGAVSVVDGQGRLKGLLTDGDIRRGFAKSLDSLNKPVSEL 274

Query: 289 MIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M K+PK I    L   A+ L+   + H I+VL VVD+ +K +G++H  DL+  G++
Sbjct: 275 MTKSPKTITARKLAAEALHLMESNKPHPITVLPVVDEEKKVVGLLHMTDLVHQGVV 330


>gi|296134692|ref|YP_003641934.1| KpsF/GutQ family protein [Thiomonas intermedia K12]
 gi|295794814|gb|ADG29604.1| KpsF/GutQ family protein [Thiomonas intermedia K12]
          Length = 332

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 147/322 (45%), Positives = 193/322 (59%), Gaps = 4/322 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           VQ A  ++  E R L SL   L    LS  F  AV+ I    GRVV++G+GKSGH+G K+
Sbjct: 11  VQLARDTLDIEARALLSLCERLAAPPLSSAFAQAVQCILRSPGRVVVSGMGKSGHVGRKI 70

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T ASTGTP++FVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R    LI
Sbjct: 71  AATFASTGTPAYFVHPAEASHGDLGMVTRDDVFLALSNSGETEELTRIVPQVKRLGATLI 130

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           ++T    S +A HADI+L    E E+CP  LAPT S   QLA+GDALA+ALL++R F   
Sbjct: 131 SMTGRTDSTLARHADILLDCAVEQEACPLNLAPTASTTAQLALGDALAVALLDARGFGPE 190

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L     DVM S +++P V    P   A+  ++ K  G  AVVD   
Sbjct: 191 DFARTHPGGSLGRKLLTHVRDVMRSAEAVPSVTGDAPFTAALMEITRKGLGMTAVVDAHG 250

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L GIIT+GD+ R   K  +LNTL  +  M   P  I  D L   A+QL+ Q+ I+ L+V
Sbjct: 251 VLAGIITDGDLRRLIEKGANLNTLQAQQAMHPQPHTIGPDALAVEAVQLMEQYRINQLLV 310

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD   K +G ++  DL    +I
Sbjct: 311 VDAQGKPVGALNMHDLFAAKVI 332


>gi|325205428|gb|ADZ00881.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M04-240196]
          Length = 326

 Score =  257 bits (657), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|319411113|emb|CBY91517.1| K06041 arabinose-5-phosphate isomerase [Neisseria meningitidis WUE
           2594]
          Length = 351

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 161 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 281 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|323144369|ref|ZP_08078977.1| arabinose 5-phosphate isomerase [Succinatimonas hippei YIT 12066]
 gi|322415822|gb|EFY06548.1| arabinose 5-phosphate isomerase [Succinatimonas hippei YIT 12066]
          Length = 322

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/293 (47%), Positives = 192/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A   + + KG+V++TG+GKSGHI +K+ASTLASTGTP+FFV A EA+HGDLGMI  
Sbjct: 31  NFEKACRLLLSCKGKVILTGVGKSGHIATKIASTLASTGTPAFFVQAGEAAHGDLGMIGN 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD++I +S SG   ELK ++   +R  IPLIAIT E  S +   ADI L+   E E+CP 
Sbjct: 91  DDVVIAISNSGEGSELKIMIPILKRRGIPLIAITGEINSSLGKEADITLSAHVEKEACPL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPT+S+  +LA+GDALAIALLE+R F+E DF + HPGG LG  L V   D+MH+G ++
Sbjct: 151 NLAPTSSSTAELALGDALAIALLEARGFTEQDFALSHPGGALGRRLLVRCKDLMHTGSAM 210

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P VK    + DA+  +S+K  G V +VD+  KL G+ T+GD+ R  +K  DLN   +  V
Sbjct: 211 PKVKDDISIKDALFEMSKKSQGIVTIVDKDGKLAGVYTDGDLRRTLNKGVDLNE-CISLV 269

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M +    I  +TL   A+ L++   I+ ++VVD+  K IG  +  DLLR GI+
Sbjct: 270 MTRKCTTIKAETLAAKAVVLMQSKKITAMVVVDENNKPIGTFNIQDLLRAGIV 322


>gi|218768872|ref|YP_002343384.1| hypothetical protein NMA2135 [Neisseria meningitidis Z2491]
 gi|121052880|emb|CAM09232.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
          Length = 324

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|270159891|ref|ZP_06188547.1| arabinose 5-phosphate isomerase [Legionella longbeachae D-4968]
 gi|289165355|ref|YP_003455493.1| arabinose 5-phosphate isomerase [Legionella longbeachae NSW150]
 gi|269988230|gb|EEZ94485.1| arabinose 5-phosphate isomerase [Legionella longbeachae D-4968]
 gi|288858528|emb|CBJ12409.1| putative arabinose 5-phosphate isomerase [Legionella longbeachae
           NSW150]
          Length = 320

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 134/315 (42%), Positives = 203/315 (64%), Gaps = 9/315 (2%)

Query: 35  KRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           K GL+ +E+  Q        +  +F  A E + A KGR+V+TG+GKSGHI +K+A+TL+S
Sbjct: 5   KLGLAVIETEAQAVFELTQRIDNRFEKACELLLACKGRIVVTGMGKSGHIANKIAATLSS 64

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG+PSFF+H  EASHGDLGMITR D +I +S SG++ EL  +L   +R  IPLI +T   
Sbjct: 65  TGSPSFFMHPGEASHGDLGMITRQDTVIAISHSGNTAELVTLLPLLKRLEIPLITLTGNP 124

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  +D+ L +  + E+CP GLAPTTS  + L +GDALAIALL++R FSE DF + H
Sbjct: 125 ESALAKASDVNLDVGIKQEACPLGLAPTTSTTVALVMGDALAIALLQARGFSEEDFALSH 184

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +   ++ H G+ +PLV     + +A+  ++EK+ G   V+D    L GI 
Sbjct: 185 PGGSLGKRLLLRIDELCHQGEQLPLVHENATVSEALIEVTEKKLGMTCVIDNKGYLTGIY 244

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GDI R      D+NT  +++VM +N + I +  L   A+ ++++++I+ L+V+D+  +
Sbjct: 245 TDGDIRRTLTHQYDINTTPIKEVMTRNARTIYKGMLAAEALAMMQKYSITSLIVIDEETR 304

Query: 326 AIGIVHFLDLLRFGI 340
              ++H  DLL+ GI
Sbjct: 305 PAAVIHLHDLLKAGI 319


>gi|254670185|emb|CBA05287.1| putative isomerase [Neisseria meningitidis alpha153]
          Length = 351

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 161 RHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 281 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|254465340|ref|ZP_05078751.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium Y4I]
 gi|206686248|gb|EDZ46730.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium Y4I]
          Length = 322

 Score =  256 bits (655), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/317 (43%), Positives = 197/317 (62%), Gaps = 7/317 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + I  E + L++L   L      +F  AV+ I   KGR++++GIGKSGHIG K+A+T
Sbjct: 10  TARQVITDEAQALNALAEGLD----ERFAEAVQLILQAKGRIIVSGIGKSGHIGHKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP++FVH AEASHGDLGM++  D+++ +S SG + EL  +L + RRFSIPLI ++
Sbjct: 66  LASTGTPAYFVHPAEASHGDLGMLSEGDVVLAISNSGEAPELANLLAFTRRFSIPLIGLS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S+  S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F   +F 
Sbjct: 126 SKMDSTLMKQADVHLQIPSLGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFRPENFR 185

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
             HPGGKLG       D+MH+GD++PLV    P+ DA+  +S+K FG   V      L G
Sbjct: 186 DFHPGGKLGAQLSKVRDLMHAGDALPLVSGDTPMADALIEISQKGFGVAGVAAADGSLAG 245

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDC 323
           IIT+GD+ R+    LN  + E VM   P  I    +   A+ ++ Q  I+ L VV  D+ 
Sbjct: 246 IITDGDLRRHMDGLLNKTAAE-VMTAGPATIAPGAMAQEAVAVMNQRKITCLFVVDPDNG 304

Query: 324 QKAIGIVHFLDLLRFGI 340
           QKA G++H  D LR G+
Sbjct: 305 QKAEGLLHIHDCLRAGL 321


>gi|291532169|emb|CBL05282.1| KpsF/GutQ family protein [Megamonas hypermegale ART12/1]
          Length = 323

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 133/297 (44%), Positives = 193/297 (64%), Gaps = 7/297 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F   V  I A  GRV++TG+GKSGH+G K+A++LASTGTPSFF+H AEA HGDLGM+T 
Sbjct: 27  EFETIVNAILACNGRVIVTGMGKSGHVGRKIAASLASTGTPSFFMHPAEAFHGDLGMVTA 86

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++ +S SG S+E+  IL   +R    +IA++   +S +  +AD  + +  E E+CP 
Sbjct: 87  NDMVLAISNSGESNEIVNILPIIKRIGAKIIAMSGRRESTLGKNADYYIDISVEREACPL 146

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT S    LA+GDALAIALL SRNF+  DF V HPGG LG  L +   +VMHSG+  
Sbjct: 147 GLAPTASTTATLAMGDALAIALLSSRNFTAQDFAVFHPGGALGRRLLLTVENVMHSGEDN 206

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDV 288
           P++ +     +A+ +++ K  G  +VVDE  K  G++T+GDI R   +    L   VED+
Sbjct: 207 PVISVHKTAKEALFLMTAKGLGATSVVDENGKFIGLVTDGDIRRMLARGAEFLDEPVEDL 266

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
           M KNP +I +D +   A+ ++ +H    I+VL V+D +  + +GIVH  DLLR G++
Sbjct: 267 MTKNPVIITKDKMAAEALSMMEKHQPKPITVLPVIDVEKNEPVGIVHLTDLLRQGVV 323


>gi|78222492|ref|YP_384239.1| KpsF/GutQ [Geobacter metallireducens GS-15]
 gi|78193747|gb|ABB31514.1| KpsF/GutQ [Geobacter metallireducens GS-15]
          Length = 321

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 199/322 (61%), Gaps = 9/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A + I  E   L +L  S+ GE    F  AV +I + KGRVV+TG+GKSG IG K+A
Sbjct: 3   IEEARKVIRIEADALMALADSINGE----FEQAVRRILSTKGRVVVTGMGKSGLIGQKIA 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LI+
Sbjct: 59  STMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVRILPIIKRLGASLIS 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++   KS +A   D+ L +  + E+CP GLAPT S    LA+GDALA+ALL  R F   D
Sbjct: 119 MSGNPKSSLAKAGDVFLDISVKEEACPLGLAPTASTTATLAMGDALAVALLLERGFRPED 178

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   D+MH+GD++P+V    P+ DA+ ++S K  G   VVD    
Sbjct: 179 FALFHPGGSLGKKLLLTVGDLMHAGDAVPIVTSDTPMRDALFVISSKGLGVTGVVDGSGA 238

Query: 263 LKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+IT+GD+ R   K L  L +   ++M +NPK I    L   A+Q + Q++I+ L V 
Sbjct: 239 LLGVITDGDLRRALSKGLAVLELPAGELMSRNPKRIKRGELAAKALQRMEQYSITSLFVF 298

Query: 321 --DDCQKAIGIVHFLDLLRFGI 340
             DD  + +G++H  DLL+ G+
Sbjct: 299 EGDDDAQPVGVIHLHDLLKAGL 320


>gi|325143037|gb|EGC65389.1| arabinose 5-phosphate isomerase [Neisseria meningitidis 961-5945]
 gi|325198959|gb|ADY94415.1| arabinose 5-phosphate isomerase [Neisseria meningitidis G2136]
          Length = 326

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I  + IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITFVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|194364737|ref|YP_002027347.1| KpsF/GutQ family protein [Stenotrophomonas maltophilia R551-3]
 gi|194347541|gb|ACF50664.1| KpsF/GutQ family protein [Stenotrophomonas maltophilia R551-3]
          Length = 333

 Score =  256 bits (654), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 197/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L ++   L GE +FQ  C  + I A +GRVV TG+GKSGHI  K+A+TLASTGTP+
Sbjct: 27  ERQALDAVADRL-GE-AFQQAC--QAILASRGRVVATGMGKSGHIARKIAATLASTGTPA 82

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F+VH  EA HGDLGMIT DD+++ LS+SG SDE+  +L   +R    LI++T   +S + 
Sbjct: 83  FYVHPGEAGHGDLGMITEDDVVLALSYSGESDEVLMLLPVLKRQGNVLISMTGRPQSSLG 142

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ +DF   HP G L
Sbjct: 143 TAADIHLDVSVPAEACPLALAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSL 202

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +DVMH+GD +P V  G  L +A+  +S KR G  AVVD    L G+ T+GD+
Sbjct: 203 GRRLLLHITDVMHTGDDLPSVGAGASLSEALMEMSRKRLGMTAVVDADGVLIGLFTDGDL 262

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      D+ T  + DVM +NP+ I  D L   A +L+  H I+ L+VVD   +A+G +
Sbjct: 263 RRALDSALDVRTAKIADVMTRNPRTIGADQLAVEAARLMETHKITGLIVVDGQGRAVGAL 322

Query: 331 HFLDLLRFGII 341
           +  DLLR  ++
Sbjct: 323 NIHDLLRARVV 333


>gi|17545132|ref|NP_518534.1| hypothetical protein RSc0413 [Ralstonia solanacearum GMI1000]
 gi|17427423|emb|CAD13941.1| putative sugar isomerase (sis) protein [Ralstonia solanacearum
           GMI1000]
          Length = 333

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 34  LKSQVSADFARAVEMVLRCTGRVVVSGIGKSGHIARKVAATLASTGTPAFFVHPAEASHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL AIL   +R    LIA+T   +S +A HAD++L    
Sbjct: 94  DLGMVTRDDVFIGFSNSGEVSELTAILPLVKRLGARLIAVTGNPQSSLAQHADVILNSRV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   Q+A+GDALA+ALL++R F  +DF   HPGG LG  L     D+
Sbjct: 154 EVEACPLNLAPTASTTAQMALGDALAVALLDARGFGADDFARSHPGGSLGRKLLTHVRDI 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M  GD++P V    PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D  
Sbjct: 214 MRQGDAVPRVTEDTPLSQALMEITRKGMAMTAVVDATGRAVGVFTDGDLRRLLETPRDWR 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T+ + +VM +NP  +  D L   A++++  H I+ L+VVD   + +G +H  DL R  +I
Sbjct: 274 TVPMHEVMHRNPHAVGPDQLAVEAVEVMETHRINQLLVVDAAGQLMGALHIHDLTRAKVI 333


>gi|260429036|ref|ZP_05783013.1| arabinose 5-phosphate isomerase [Citreicella sp. SE45]
 gi|260419659|gb|EEX12912.1| arabinose 5-phosphate isomerase [Citreicella sp. SE45]
          Length = 321

 Score =  256 bits (654), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 128/296 (43%), Positives = 187/296 (63%), Gaps = 2/296 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  EL   F   +  +  I GR++++G+GKSGH+  K+A+TLASTG P+  VH  EASHG
Sbjct: 27  LADELPASFEDVIALLLHINGRIIVSGMGKSGHVAGKIAATLASTGAPAQVVHPGEASHG 86

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMIT DD++I++S SG + EL  ++ +  RF+IP+IA+T    S +A  A  VL +P 
Sbjct: 87  DLGMITPDDVVIMISNSGETRELADMIAHCARFAIPMIAMTRRADSTLARSATHVLLMPD 146

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
            PE+C  G+APTTS  M +A+GDALA+AL++ R F   +F   HPGG LG   +  S VM
Sbjct: 147 APEACAIGMAPTTSTTMAMALGDALAVALMQERGFDRENFLAFHPGGSLGAQLLRVSAVM 206

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H GD +P V+    + + + ++S+K FG  A+V++G KLKG+IT+GD+ RN  + L   +
Sbjct: 207 HRGDELPTVQADTSMGETLVVMSQKGFGVAALVEDG-KLKGVITDGDLRRNL-EGLMERT 264

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +V   NP+ +  D LLT A+ ++    IS L  V+     +G+VH  D LR G+
Sbjct: 265 AGEVATPNPRTVAPDALLTEALGMMNARKISSLFAVEADGTLVGLVHIHDALRAGV 320


>gi|189499413|ref|YP_001958883.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides BS1]
 gi|189494854|gb|ACE03402.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides BS1]
          Length = 326

 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 195/301 (64%), Gaps = 3/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S + G L   FH +VE + A +G+ +I+G+GKSG IG K+A+TL+STGT + F+H A+A+
Sbjct: 26  SRIAGLLDRNFHASVELLCACRGKAIISGMGKSGIIGQKIAATLSSTGTTALFMHPADAA 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLG+++ DD++I LS SG ++EL  IL   R+  + +IA T   +S +A +ADIVL +
Sbjct: 86  HGDLGVVSEDDVVICLSKSGMTEELNFILPALRKIGVSIIAFTGNKRSYLAENADIVLDV 145

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPTTS    LA+GDALAI L++ + F+  DF V HP G LG  L +  S
Sbjct: 146 SVEEEACPFDLAPTTSTTAMLAMGDALAICLMQEKQFTHRDFAVTHPKGSLGRRLTMKVS 205

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKD 279
           D+M +G+++PLV+   PL D I  ++ KRFG   +VD   KL GI T+GD+ R      D
Sbjct: 206 DIMATGEALPLVEETVPLTDLILEMTSKRFGMSGIVDHSGKLSGIFTDGDLRRIIQCRSD 265

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + +L  +DVM K PK +  DT+    +++L  H I+ L+V +D  + +G++H  DL+  G
Sbjct: 266 ILSLQAKDVMTKGPKTVSADTMAEECLKILESHRITQLLVCEDDNRPVGLIHIHDLISLG 325

Query: 340 I 340
           +
Sbjct: 326 L 326


>gi|126734480|ref|ZP_01750227.1| arabinose 5-phosphate isomerase [Roseobacter sp. CCS2]
 gi|126717346|gb|EBA14210.1| arabinose 5-phosphate isomerase [Roseobacter sp. CCS2]
          Length = 322

 Score =  256 bits (653), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 194/318 (61%), Gaps = 7/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R I  E + L+ L      +L   F  A+E +    GRV++TG+GKSGHI  K+A+T
Sbjct: 10  AARRVITQEAKALTVLSD----QLGDSFGEAIELLLNASGRVIVTGMGKSGHIARKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF I +I + 
Sbjct: 66  FASTGTPAHFVHPAEASHGDLGMMTRGDVVLVLSNSGETPELADLVAYTRRFGIAMIGVA 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S+ +S +   AD+ + LP+  E+C  G+ PTTS  M LA+GDALA+AL+E R+F+  +F 
Sbjct: 126 SKPQSTLLQRADVAIVLPQLGEACGTGVVPTTSTTMTLALGDALAVALMEHRDFTPENFR 185

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
             HPGGKLG      SD+MH  +++PLV    P+ +A+ ++S+K FG V V D   +L G
Sbjct: 186 EFHPGGKLGAQLSKVSDLMHVANAVPLVPADTPMSEALLVISQKGFGVVGVTDTDDRLIG 245

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           I+T+GD+ R+    L+  +  +VM   P  +  + L   A+ L+    I+ L  VD    
Sbjct: 246 IVTDGDLRRHMTGLLDH-TAREVMTAQPTTVAPNALAEEAVALMNDKKITCLFAVDPAGP 304

Query: 326 --AIGIVHFLDLLRFGII 341
             A G +H  D LR GI+
Sbjct: 305 GTAAGFIHIHDCLRAGIV 322


>gi|184157545|ref|YP_001845884.1| sugar phosphate isomerase [Acinetobacter baumannii ACICU]
 gi|239503715|ref|ZP_04663025.1| sugar phosphate isomerase [Acinetobacter baumannii AB900]
 gi|332874279|ref|ZP_08442198.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6014059]
 gi|183209139|gb|ACC56537.1| predicted sugar phosphate isomerase [Acinetobacter baumannii ACICU]
 gi|193076931|gb|ABO11664.2| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii ATCC
           17978]
 gi|322507859|gb|ADX03313.1| kdsD [Acinetobacter baumannii 1656-2]
 gi|323517456|gb|ADX91837.1| sugar phosphate isomerase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737504|gb|EGJ68412.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6014059]
          Length = 325

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 200/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ +  L +    ++  +F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQAIDVLAT----QIDDRFNRACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L Q
Sbjct: 237 IVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNQ 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|197106420|ref|YP_002131797.1| sugar isomerase, KpsF/GutQ [Phenylobacterium zucineum HLK1]
 gi|196479840|gb|ACG79368.1| sugar isomerase, KpsF/GutQ [Phenylobacterium zucineum HLK1]
          Length = 321

 Score =  256 bits (653), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/288 (47%), Positives = 189/288 (65%), Gaps = 5/288 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ + A +GR++ TG+GKSGH+  KLA+T ASTGTP+FFVH AEASHGDLGMI   D I+
Sbjct: 36  VDLLFAAEGRIICTGMGKSGHVARKLAATFASTGTPAFFVHPAEASHGDLGMIGPADAIV 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            LS SG + EL  +L YA RFSIPLIAIT++  S +   AD+VL L    E+     APT
Sbjct: 96  ALSKSGEARELADVLAYAGRFSIPLIAITADPSSALGRAADVVLQLADRSEATAQVNAPT 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           TS  +Q+A+GDALA+ALLE R F   DF+V HPGGKLG +     D+MH  D +PLV  G
Sbjct: 156 TSTTLQIALGDALAVALLERRGFKAQDFHVFHPGGKLGAMLRTVRDLMHGQDELPLVPEG 215

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KV 295
            P+  A+ +++EKR+G V V+D   +L G IT+GD+ R+    ++  + E VM   P KV
Sbjct: 216 APMRQALLVMTEKRWGIVGVLDADGRLIGAITDGDLRRHIDGLMDHTAGE-VMTPGPRKV 274

Query: 296 ILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +    L + A+ L+      ++VL VV+D  + +G++H  DLLR G++
Sbjct: 275 VPPGMLASEALALMSDPPPPVTVLFVVEDG-RPVGVLHVHDLLRAGVM 321


>gi|317487197|ref|ZP_07945997.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
 gi|316921536|gb|EFV42822.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
          Length = 325

 Score =  255 bits (652), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 192/293 (65%), Gaps = 2/293 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F   +  + +I GR+ +TG+GKSGH+  K+A+TLASTG+P++F+H AEASHGDLG
Sbjct: 34  DLDDSFDEVIRCLLSISGRIAVTGMGKSGHVARKVAATLASTGSPAYFIHPAEASHGDLG 93

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M++R D +I  S SG + EL  I+ +A R  +P+  +T    S +A HAD VL LP EPE
Sbjct: 94  MVSRHDAVIAFSNSGETAELSDIILFASRHGVPITGVTKRGDSFLARHADHVLLLPNEPE 153

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           +CP G APTTS  +Q+A+GDA+A++LL++R F   DF+  HPGG+LG   +   ++MH G
Sbjct: 154 ACPIGCAPTTSTTLQMALGDAIALSLLKARGFGAEDFHRFHPGGRLGRKLMTVREIMHVG 213

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +++PL  +  P+ + + I++ K FGCV ++++G  L GIIT+GD+ R+    L  L+ E 
Sbjct: 214 EALPLASLDSPMTEILCIMTGKGFGCVGIMEKGI-LVGIITDGDLRRHMDGGLLGLTAER 272

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           VM +NP  + E  L   A+ +++   I+ L VV   +  +GI++  D LR G+
Sbjct: 273 VMSRNPITVDEHCLAAKALGIMQSSKITSLYVVRSGEP-VGILNVHDCLRAGV 324


>gi|325926072|ref|ZP_08187435.1| KpsF/GutQ family protein [Xanthomonas perforans 91-118]
 gi|325543530|gb|EGD14950.1| KpsF/GutQ family protein [Xanthomonas perforans 91-118]
          Length = 333

 Score =  255 bits (652), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V    R +  E+  L+S+ + +  E    F  A   + A +GRVV TG+GKSGH+  K
Sbjct: 15  SLVASGQRVLQIEREALASVGARIGSE----FAAACRLVLASRGRVVATGMGKSGHVARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE++ +L   +R   P+
Sbjct: 71  IAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 131 IAMTGRTGSTLAQAADVHLDVSVSAEACPLHLAPTSSTTASLAMGDALAVALLDARGFTA 190

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG  L +  +DVMH+G+ +P V+    L +A+  +S KR G  AVVD  
Sbjct: 191 DDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSEALMEMSRKRLGMTAVVDAD 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D L   A +L+  + I+ L+
Sbjct: 251 DRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGADQLAAEAARLMEDYKINGLI 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   +A+G ++  DLLR  ++
Sbjct: 311 VVDAQHRAVGALNIHDLLRAKVV 333


>gi|307824377|ref|ZP_07654603.1| KpsF/GutQ family protein [Methylobacter tundripaludum SV96]
 gi|307734757|gb|EFO05608.1| KpsF/GutQ family protein [Methylobacter tundripaludum SV96]
          Length = 325

 Score =  255 bits (652), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 202/324 (62%), Gaps = 15/324 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  L  I  E + +++L   +  +  F     F+C         GRVV+TG+GKSGHI  
Sbjct: 10  KLGLAVIQVETQAIAALADRINDDFVFACKLMFNC--------NGRVVVTGMGKSGHIAG 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH+ EASHGDLGMITR D+++ LS SG ++E+  IL   +R  +P
Sbjct: 62  KIAATLASTGTPAFFVHSGEASHGDLGMITRQDVVLALSNSGETEEVLTILPIIKRLGVP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  A   + +  E E+CP GLAPT+S    L +GDALA++LLE+R F+
Sbjct: 122 LIAMTGNPASTLAKFATTHINVAVEQEACPLGLAPTSSTTAALVMGDALAVSLLEARGFT 181

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF + HPGG LG  L +   D+MH+ + +P+V     +  A+  ++EK+ G  A+VD 
Sbjct: 182 RDDFALSHPGGSLGKRLLLMVGDIMHADEKVPIVSESALISHALLEMTEKKLGMTAIVDA 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D++  ++ +VM  N  VI  D L   AMQ++ +  I+ L
Sbjct: 242 DNRVAGIFTDGDLRRMLSRNLDIHKTAITEVMTPNCAVISADILAAEAMQIMERKKINAL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD  Q+AIG ++  DL+R GI+
Sbjct: 302 IVVDGQQRAIGALNMHDLIRAGIV 325


>gi|289548135|ref|YP_003473123.1| KpsF/GutQ family protein [Thermocrinis albus DSM 14484]
 gi|289181752|gb|ADC88996.1| KpsF/GutQ family protein [Thermocrinis albus DSM 14484]
          Length = 321

 Score =  255 bits (652), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 203/329 (61%), Gaps = 14/329 (4%)

Query: 19  MKNSTVQCALRSIIAE----KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           MK   +Q A R    E    KR + SL+ S        F  AVE + + +G+V+ TG+GK
Sbjct: 1   MKEDILQKARRVFEIEISQIKRLMDSLDDS--------FVRAVEILLSCEGKVITTGVGK 52

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGHI  K+ASTL+STGTP+ F+H +EA HGDLG+I + D+++ +S SG S E+  +L Y 
Sbjct: 53  SGHIARKIASTLSSTGTPAHFLHPSEALHGDLGVIDKKDVLLAISNSGESKEVLDLLPYV 112

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +   +PLIAIT+   S +A HAD+ + L  E E+CP  LAPT+S+   L +GDALA+ LL
Sbjct: 113 KLLGVPLIAITNRRDSTLAKHADVHIFLNVEKEACPLHLAPTSSSTASLVLGDALAMVLL 172

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           E R F+E DF + HP G LG       D+ H+G+ +P+V+   P+   +  ++ K FG  
Sbjct: 173 ELRGFTEKDFALRHPAGSLGRKLKLVRDLYHTGEELPVVEEDTPMPQVVLEITSKGFGAT 232

Query: 255 AVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AVV++  KL GIIT+GD+ R  N   DL+  + +D M +NPKV   D L   A+  +  +
Sbjct: 233 AVVNKEGKLVGIITDGDLRRFINRGGDLSRSTAKDAMTRNPKVAYPDELAAQALSRMESY 292

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+VL+VVD   + IGI+H  D+LR GI+
Sbjct: 293 KITVLIVVDQENRPIGIIHMHDILRAGIV 321


>gi|330877181|gb|EGH11330.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 324

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIRMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 LTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   K +G  +  DLLR G++
Sbjct: 304 DQNDKPVGAFNLQDLLRAGVM 324


>gi|190573143|ref|YP_001970988.1| putative arabinose 5-phosphate isomerase [Stenotrophomonas
           maltophilia K279a]
 gi|190011065|emb|CAQ44674.1| putative arabinose 5-phosphate isomerase [Stenotrophomonas
           maltophilia K279a]
          Length = 333

 Score =  255 bits (652), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 141/311 (45%), Positives = 197/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L ++   L GE +FQ  C  + I A +GRVV TG+GKSGHI  K+A+TLASTGTP+
Sbjct: 27  ERQALDAVADRL-GE-AFQQAC--QAILASRGRVVATGMGKSGHIARKIAATLASTGTPA 82

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F+VH  EA HGDLGMIT DD+++ LS+SG SDE+  +L   +R    LI++T   +S +A
Sbjct: 83  FYVHPGEAGHGDLGMITEDDVVLALSYSGESDEVLMLLPVLKRQGNLLISMTGRPQSSLA 142

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ +DF   HP G L
Sbjct: 143 AAADIHLDVSVPAEACPLALAPTSSTTASLAMGDALAVALLDARGFTADDFARSHPAGSL 202

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +DVMH+GD +P V     L +A+  +S KR G  AVVD    L G+ T+GD+
Sbjct: 203 GRRLLLHITDVMHTGDDLPSVGADASLSEALVEMSRKRLGMTAVVDADGVLIGLFTDGDL 262

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      D+ T  + DVM +NP+ I  D L   A +L+  H I+ L+VVD   +A+G +
Sbjct: 263 RRALDSALDVRTAKIADVMTRNPRTIGADQLAVEAARLMETHKITGLIVVDGQGRAVGAL 322

Query: 331 HFLDLLRFGII 341
           +  DLLR  ++
Sbjct: 323 NIHDLLRARVV 333


>gi|254497758|ref|ZP_05110531.1| polysialic acid capsule expression protein [Legionella drancourtii
           LLAP12]
 gi|254353051|gb|EET11813.1| polysialic acid capsule expression protein [Legionella drancourtii
           LLAP12]
          Length = 320

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 132/313 (42%), Positives = 203/313 (64%), Gaps = 9/313 (2%)

Query: 37  GLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           GL+ +E+  Q        +  +F  A E + A +GR+V+TG+GKSGHI +K+A+TL+STG
Sbjct: 7   GLAVIETEAQAVFELTQRIDSRFEKACELLLACQGRIVVTGMGKSGHIANKIAATLSSTG 66

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           +PSFF+H  EASHGDLGMITR D +I +S SG++ EL  +L   +R  +PLI +T   +S
Sbjct: 67  SPSFFMHPGEASHGDLGMITRQDTVIAISNSGNTTELVTLLPLLKRLEVPLITLTGNTES 126

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
           ++A  ADI L +  + E+CP GLAPTTS  + L +GDALAIALL++R FSE DF + HPG
Sbjct: 127 ILARAADINLDVSIKQEACPLGLAPTTSTTVSLVMGDALAIALLQARGFSEEDFALSHPG 186

Query: 211 GKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG  L +   ++ H G+ +PL+     + +A+  ++ K+ G   VVD+   L G+ T+
Sbjct: 187 GALGKRLLLRVDELCHQGNDLPLISENATVSEALIEVTNKKLGMTCVVDQKGYLVGVYTD 246

Query: 270 GDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GDI R   +  D+NT  +++VM ++ + I +  L   A+ ++++H+I+ L+V DD    I
Sbjct: 247 GDIRRTLTRQCDINTTQLKEVMTRSARTIHKGMLAAEAVAIMQKHSITSLIVADDKNHPI 306

Query: 328 GIVHFLDLLRFGI 340
            ++H  DLL+ G+
Sbjct: 307 AVLHLHDLLKAGV 319


>gi|308388560|gb|ADO30880.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis alpha710]
          Length = 351

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S++A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSIMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 161 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++  PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 281 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|260557958|ref|ZP_05830170.1| sugar phosphate isomerase [Acinetobacter baumannii ATCC 19606]
 gi|260408468|gb|EEX01774.1| sugar phosphate isomerase [Acinetobacter baumannii ATCC 19606]
          Length = 325

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 200/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ +  L +    ++  +F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQAIDVLAT----QIDDRFNRACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPETPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L Q
Sbjct: 237 IVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNQ 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|289207550|ref|YP_003459616.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
 gi|288943181|gb|ADC70880.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
          Length = 325

 Score =  255 bits (651), Expect = 8e-66,   Method: Compositional matrix adjust.
 Identities = 137/291 (47%), Positives = 185/291 (63%), Gaps = 3/291 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A   I   +GRVV+TG+GKSGHIGSKLA+TLASTGTP+FFVH  EASHGDLGMITRD
Sbjct: 34  FLEACRHILECRGRVVVTGMGKSGHIGSKLAATLASTGTPAFFVHPGEASHGDLGMITRD 93

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I LS SG +DEL  IL   RR  +PLIA+T    S +   A + L +  E E+CP G
Sbjct: 94  DVVIALSNSGETDELLTILPLIRRLDVPLIALTGNPGSRLGQDATVHLDVSVEREACPLG 153

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    LA+ DALA+A+L++R F+ +DF   HPGG+LG  L V  +D+MH+GD+IP
Sbjct: 154 LAPTSSTTAALAMSDALAVAVLDARGFTADDFARSHPGGRLGRRLLVHVADIMHTGDAIP 213

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V    PL DA+  ++ K  G V V D    + G+ T+GD+ R   +   L  L++  VM
Sbjct: 214 RVGPEAPLKDALFEITRKGLGLVIVADPEAHILGVFTDGDLRRTLDRGESLEALTIGQVM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +         L   A++ +    I+ L VVDD Q+ +G+++  DLLR G+
Sbjct: 274 TRGGHAARPQWLAVEALETMESKRINALPVVDDDQRLVGVLNMHDLLRAGV 324


>gi|330964016|gb|EGH64276.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 324

 Score =  255 bits (651), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRVGIRMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   K +G  +  DLLR G++
Sbjct: 304 DQNDKPVGAFNLQDLLRAGVM 324


>gi|26987693|ref|NP_743118.1| KpsF/GutQ family protein [Pseudomonas putida KT2440]
 gi|24982379|gb|AAN66582.1|AE016286_6 KpsF/GutQ family protein [Pseudomonas putida KT2440]
          Length = 324

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 203/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E+ L   +   F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLE---LEAVEA-LLARIDDNFVKACELILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGIKLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+GD +P V  G  L DA+  +S K  G   +V+   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DREDRPTGALNMHDLLRAGVM 324


>gi|261391877|emb|CAX49336.1| arabinose-5-phosphate isomerase [Neisseria meningitidis 8013]
          Length = 324

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 201/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|260549525|ref|ZP_05823743.1| sugar phosphate isomerase [Acinetobacter sp. RUH2624]
 gi|260407318|gb|EEX00793.1| sugar phosphate isomerase [Acinetobacter sp. RUH2624]
          Length = 325

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 200/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ +  L +    ++  +F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQAIDVLAT----QIDDRFNRACEVLLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +P+I I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPMITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPETPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L Q
Sbjct: 237 IVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNQ 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|330958009|gb|EGH58269.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 324

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A +GRVV+ G+GKSGH+G+K+A
Sbjct: 8   IQAAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASQGRVVVVGMGKSGHVGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SG+++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGTTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    SV+A  AD+ L +    E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 LTGNPDSVLAKAADVNLNVHVAHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIIEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+   ++++VM  + K    + L   A++++  + I  L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPFDIRQTTIDEVMTHHGKTAHAEMLAAEALKIMEDNKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQDDRPVGAFNLQDLLRAGVM 324


>gi|241760830|ref|ZP_04758921.1| sugar isomerase, KpsF/GutQ family [Neisseria flavescens SK114]
 gi|241318727|gb|EER55279.1| sugar isomerase, KpsF/GutQ family [Neisseria flavescens SK114]
          Length = 324

 Score =  254 bits (650), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 202/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + ++L       F  A E +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAAALD----HDFVRAAEALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLICITAHPTSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +DF + HP G L
Sbjct: 134 RHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV++    IG +
Sbjct: 254 RRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVVEENGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|325130881|gb|EGC53611.1| arabinose 5-phosphate isomerase [Neisseria meningitidis OX99.30304]
 gi|325136926|gb|EGC59523.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M0579]
          Length = 326

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 201/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++  PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|238019686|ref|ZP_04600112.1| hypothetical protein VEIDISOL_01560 [Veillonella dispar ATCC 17748]
 gi|237863727|gb|EEP65017.1| hypothetical protein VEIDISOL_01560 [Veillonella dispar ATCC 17748]
          Length = 323

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 143/314 (45%), Positives = 192/314 (61%), Gaps = 10/314 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R +  L S     L   F  AV  I A KGRVV TG+GKSGHIG K+A+TLASTGTP+
Sbjct: 14  EARAIEELSS----RLDHNFVNAVNMILACKGRVVCTGMGKSGHIGRKIAATLASTGTPA 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    LI +  + +S +A
Sbjct: 70  LFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKLICVVGKPESTLA 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+  +F V HPGG L
Sbjct: 130 KNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTPENFAVFHPGGSL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE   L G++T+GD+
Sbjct: 190 GRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEDGHLLGLVTDGDV 249

Query: 273 FRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAI 327
            R      N L   VED+M   P+ I +D L   A+ L+ ++    I+VL VVD   K +
Sbjct: 250 RRGLDSGSNFLEWPVEDMMTSMPRTITKDKLAAEALHLMEKNQPRPITVLPVVDTDNKCL 309

Query: 328 GIVHFLDLLRFGII 341
           GIVH  DLLR GI+
Sbjct: 310 GIVHITDLLRRGIV 323


>gi|28871583|ref|NP_794202.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213966607|ref|ZP_03394758.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato T1]
 gi|301383116|ref|ZP_07231534.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato Max13]
 gi|302058645|ref|ZP_07250186.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato K40]
 gi|302133822|ref|ZP_07259812.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28854835|gb|AAO57897.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213928457|gb|EEB62001.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato T1]
 gi|331016692|gb|EGH96748.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 324

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   K +G  +  DLLR G++
Sbjct: 304 DQNDKPVGAFNLQDLLRAGVM 324


>gi|121534986|ref|ZP_01666804.1| KpsF/GutQ family protein [Thermosinus carboxydivorans Nor1]
 gi|121306399|gb|EAX47323.1| KpsF/GutQ family protein [Thermosinus carboxydivorans Nor1]
          Length = 322

 Score =  254 bits (649), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 198/315 (62%), Gaps = 10/315 (3%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE   + SL   + GE    F  AV  I A KGRV++TG+GKSG IG K+A+TLASTGTP
Sbjct: 12  AEAEAIRSLIPRINGE----FTQAVNMILACKGRVIVTGMGKSGLIGKKIAATLASTGTP 67

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +FF+H AE  HGDLGM+T +D+++ +S SG ++E+ +IL   +R    +IA+T    S +
Sbjct: 68  AFFLHPAEGVHGDLGMVTSEDIVLAISNSGETNEIISILPSIKRIGARIIAMTGRPASTL 127

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
             ++D+VL +  E E+CP GLAPT S    LA+GDALA+ALL  R F+  DF + HPGG 
Sbjct: 128 GKNSDLVLDVAVEKEACPLGLAPTASTTATLAMGDALAVALLSERKFTPEDFALFHPGGS 187

Query: 213 LG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +   +VMHSGD  P+V     + +A+ +++ K  G  +VVD   +L GIIT+GD
Sbjct: 188 LGRKLLLTVENVMHSGDDNPVVTPDKTVKEALFVITAKGLGATSVVDADGRLLGIITDGD 247

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKA 326
           I R   K  D     V  +M + P+ I +D L   A+ ++ ++    I+VL VVD+  +A
Sbjct: 248 IRRGLEKGHDFLDKPVTALMTRTPRTITKDKLAAQALNMMEKNKPRPITVLPVVDEQYRA 307

Query: 327 IGIVHFLDLLRFGII 341
           IG++H  DLLR G++
Sbjct: 308 IGMIHLTDLLRQGVV 322


>gi|325919987|ref|ZP_08181969.1| KpsF/GutQ family protein [Xanthomonas gardneri ATCC 19865]
 gi|325549530|gb|EGD20402.1| KpsF/GutQ family protein [Xanthomonas gardneri ATCC 19865]
          Length = 333

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 142/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  + T    SL     V    R +  E++ L+ + + +  +    F  A   + A
Sbjct: 1   MAVSHLPTATVSDASL-----VASGQRVLEIERKALAGVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R    +IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNSIIAMTGRPASSLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMHSGD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHSGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNEGRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|254671979|emb|CBA04427.1| putative isomerase [Neisseria meningitidis alpha275]
          Length = 351

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 201/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 161 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++  PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKGLGMLAVTDGQGRLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D     IG +
Sbjct: 281 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLIGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|325203464|gb|ADY98917.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240355]
          Length = 326

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 200/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----DLDENFALAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQCRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM   PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTQPKTISTERLATEALKVMQANHVNGLLVTDADGVLTGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|288818913|ref|YP_003433261.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
 gi|288788313|dbj|BAI70060.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
 gi|308752500|gb|ADO45983.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
          Length = 321

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 126/288 (43%), Positives = 192/288 (66%), Gaps = 2/288 (0%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVE I + +G+V+ TG+GKSGHI  K+ASTL+STGTP+ F+H +EA HGDLG+I   D++
Sbjct: 34  AVEIILSCEGKVITTGVGKSGHIAQKIASTLSSTGTPAHFLHPSEALHGDLGVIDHKDVL 93

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           + +S SG S E+ +++ Y +   +P+IAIT+   S +A +AD+ L L  + E+CP  LAP
Sbjct: 94  LAVSNSGESPEVVSLIPYVKLLKVPIIAITNREDSTLARYADVHLFLNVKKEACPLELAP 153

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           T+S+   L +GDA+A+ LLE R F++ DF + HP G LG       ++ H+G+ +P+V  
Sbjct: 154 TSSSTASLVLGDAIAMVLLELRGFTKEDFALRHPAGSLGRKLRVVRELYHTGEEVPIVYE 213

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNP 293
             P+ D I  ++ K FG  AV+D+G KL GIIT+GD+ R   +  + NT + +DVM KNP
Sbjct: 214 DTPMPDVIIEMTSKGFGATAVIDKGGKLVGIITDGDLRRFVRRGGNFNTSTAKDVMTKNP 273

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           K +  D L   A++ + +H I+VL+V+DD  +  GI+H  D+LR G++
Sbjct: 274 KTVKSDELAAEALKKMEEHKITVLIVIDDEGRPEGIIHMHDILRAGVL 321


>gi|303256244|ref|ZP_07342260.1| sugar isomerase, KpsF/GutQ [Burkholderiales bacterium 1_1_47]
 gi|331001305|ref|ZP_08324931.1| arabinose 5-phosphate isomerase [Parasutterella excrementihominis
           YIT 11859]
 gi|302860973|gb|EFL84048.1| sugar isomerase, KpsF/GutQ [Burkholderiales bacterium 1_1_47]
 gi|329569032|gb|EGG50828.1| arabinose 5-phosphate isomerase [Parasutterella excrementihominis
           YIT 11859]
          Length = 327

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/301 (44%), Positives = 191/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++ G L   F  AV  I   KGRVV++G+GKSGHI  K+A+TLASTG+P+FFVHAAEA+H
Sbjct: 27  AIAGRLDETFVKAVTLILNCKGRVVVSGVGKSGHIARKIAATLASTGSPAFFVHAAEAAH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT+DD++I +S+SG++ EL  I+    R   P+I+IT  + + +A  A + L + 
Sbjct: 87  GDLGMITKDDVVIAISYSGTTSELLTIIPTVIREGAPVISITGSDDNTLAKEATVNLNVH 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT+S    LA+GDALA+A L+++ F   DF   HPGG LG  L     D
Sbjct: 147 VSREACPLNLAPTSSTTATLAMGDALAVACLDAKGFGPEDFARSHPGGALGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SG++ P+V+I   ++DA+  +++K+ G  A+VDE  K+KGI TEGD+ R   +  D+
Sbjct: 207 VMRSGEATPVVRIDATVLDAVKEITKKKIGMTAIVDETDKVKGIFTEGDLRRLIERVGDI 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM  NP  I    L   A ++L     + L+VVDD  + IG +H  DL+   +
Sbjct: 267 RPLKIRDVMTPNPTTIQPQALAAEAAKILNSTLRNQLLVVDDSDRLIGALHIHDLMTAKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|86136834|ref|ZP_01055412.1| arabinose 5-phosphate isomerase [Roseobacter sp. MED193]
 gi|85826158|gb|EAQ46355.1| arabinose 5-phosphate isomerase [Roseobacter sp. MED193]
          Length = 322

 Score =  254 bits (648), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 133/309 (43%), Positives = 192/309 (62%), Gaps = 7/309 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L +L  S       +F  A   + A  GR++I+GIGKSGHIG K+A+TLASTGTP+
Sbjct: 18  EARALEALAESFD----ERFVEAANLVLAATGRIIISGIGKSGHIGRKIAATLASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IPLI ++S+  S + 
Sbjct: 74  YFVHPAEASHGDLGMLSKGDVVVAISNSGEAPELANLLAFTRRFDIPLIGLSSKPDSTLM 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +P   E+C +G+ P+ S  + LA+GDALAIA+++ R+F   +F   HPGGKL
Sbjct: 134 TQADVQLQIPAMGEACGYGIVPSNSTTLTLAMGDALAIAIMKHRDFRPENFRDFHPGGKL 193

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      SD+MH  +++P+V    P+ DA+  +S+K FG   V D    L GIIT+GD+ 
Sbjct: 194 GAQLSKVSDLMHGDEALPVVAADTPMSDALIEISQKGFGVSGVTDATGNLLGIITDGDLR 253

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVH 331
           R+    L   +   VM K+P  I  D L   A+ ++ Q  I+ L VVD    Q+A G++H
Sbjct: 254 RHMDGLLQKEAAA-VMTKDPTTISPDALAAEAVAIMNQRKITCLFVVDPAKGQRAEGLLH 312

Query: 332 FLDLLRFGI 340
             D LR G+
Sbjct: 313 IHDCLRAGL 321


>gi|77457089|ref|YP_346594.1| KpsF/GutQ [Pseudomonas fluorescens Pf0-1]
 gi|77381092|gb|ABA72605.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf0-1]
          Length = 324

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 203/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   +  +    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEVEAVQGLLPHIDAD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 VTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+G  +P V+ G  L DA+  ++ K  G   +++   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+++ +++ VM  + K    + L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+  + IG  +  DLLR G++
Sbjct: 304 DEEDRPIGAFNLSDLLRAGVM 324


>gi|330895267|gb|EGH27605.1| KpsF/GutQ [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 324

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 203/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T +++S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDSESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQNDRPVGAFNLQDLLRAGVM 324


>gi|163738083|ref|ZP_02145499.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
 gi|161388699|gb|EDQ13052.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
          Length = 323

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A + I  E R L +L   L      +F  AV+ +   +GRV+++GIGKSGHIG K+A
Sbjct: 8   LATARQVITDEARALDALADGLDA----RFAEAVDLVLQAEGRVIVSGIGKSGHIGHKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IPLI 
Sbjct: 64  ATLASTGTPAYFVHPAEASHGDLGMLSKGDVVLAISNSGEAPELANLLSFTRRFGIPLIG 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++S   S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F   +
Sbjct: 124 LSSRMDSTLMKEADVHLQIPALGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFRPEN 183

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGGKLG       D+MH G ++PLV    P+ DA+  +S+K FG   V      L
Sbjct: 184 FRAFHPGGKLGARLSKVDDLMHDGTALPLVGADTPMSDALIEISQKGFGVAGVTGANGTL 243

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-- 321
           +GIIT+GD+ R+    L+  +  DVM  +P  I   +L   A+ ++    I+ L VVD  
Sbjct: 244 QGIITDGDLRRHMDGLLDK-TAADVMTSSPTTIAPGSLAEEAVAIMNDRKITCLFVVDPA 302

Query: 322 -DCQKAIGIVHFLDLLRFGI 340
            D  +A+G++H  D LR G+
Sbjct: 303 GDTAQAVGLLHIHDCLRVGL 322


>gi|261379307|ref|ZP_05983880.1| arabinose 5-phosphate isomerase [Neisseria subflava NJ9703]
 gi|284797747|gb|EFC53094.1| arabinose 5-phosphate isomerase [Neisseria subflava NJ9703]
          Length = 324

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 139/311 (44%), Positives = 201/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + ++L       F  A E +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAAALD----HDFIRAAEALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI   D+++ +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDHDVVVAISNSGESDEIAAIIPALKRKNITLICITAHPTSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +DF + HP G L
Sbjct: 134 RHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV++    IG +
Sbjct: 254 RRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVVEENGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|169796522|ref|YP_001714315.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii AYE]
 gi|213156365|ref|YP_002318785.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
 gi|215483985|ref|YP_002326210.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii
           AB307-0294]
 gi|301346199|ref|ZP_07226940.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB056]
 gi|301510178|ref|ZP_07235415.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB058]
 gi|301594398|ref|ZP_07239406.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB059]
 gi|332853946|ref|ZP_08435066.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013150]
 gi|332870202|ref|ZP_08439097.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013113]
 gi|169149449|emb|CAM87335.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii AYE]
 gi|213055525|gb|ACJ40427.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
 gi|213987865|gb|ACJ58164.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii
           AB307-0294]
 gi|332728302|gb|EGJ59683.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013150]
 gi|332732369|gb|EGJ63626.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013113]
          Length = 325

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 200/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ +  L +    ++  +F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQAIDVLAT----QIDDRFNRACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+G+ +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGEELPKVSPDTPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L Q
Sbjct: 237 IVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNQ 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|156307374|ref|XP_001617622.1| hypothetical protein NEMVEDRAFT_v1g157171 [Nematostella vectensis]
 gi|156194880|gb|EDO25522.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 132/287 (45%), Positives = 189/287 (65%), Gaps = 3/287 (1%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           E I A KGRVV+ G+GKSGH+G+K+A+TLASTGT +FFVH AEASHGD+GMITRDD+++ 
Sbjct: 1   ELILASKGRVVVVGMGKSGHVGNKIAATLASTGTTAFFVHPAEASHGDMGMITRDDVVLA 60

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           LS SGS+ E+  +L   +R  I LI++T   +S +A  A++ L      E+CP  LAPT+
Sbjct: 61  LSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAAEVNLDARVSQEACPLNLAPTS 120

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIG 236
           S  + L +GDALAIALLE+R F+  DF   HPGG LG  L +   +VMH+GDS+P VK G
Sbjct: 121 STTVSLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGDSLPRVKRG 180

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPK 294
             L DA+  +++K  G   V ++  +L GI T+GD+ R   ++++     ++DVM  N K
Sbjct: 181 TSLRDALLEMTQKGLGMTVVTEDDGRLAGIFTDGDLRRTLDRNIDVRQTIIDDVMTANGK 240

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L   A++++  H IS L+V+DD    IG ++  DLLR G++
Sbjct: 241 TARAEMLAAEALKIMEDHKISSLVVIDDNDMPIGALNMHDLLRAGVM 287


>gi|149378025|ref|ZP_01895749.1| hypothetical protein MDG893_01450 [Marinobacter algicola DG893]
 gi|149357680|gb|EDM46178.1| hypothetical protein MDG893_01450 [Marinobacter algicola DG893]
          Length = 326

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 138/320 (43%), Positives = 200/320 (62%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + ALR+I  E+  + +L       +  +F  A E I A KGRVV+TG+GKSGHIG+K+A+
Sbjct: 11  KSALRAIEIEREAIQALTD----RIDERFVRACEVIMACKGRVVVTGMGKSGHIGNKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG++ E+  IL   +R   PLI++
Sbjct: 67  TLASTGTPSFFVHPGEASHGDLGMITSQDVVLGISNSGNTSEVLTILPLIKRMGAPLISM 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S++A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R FS  DF
Sbjct: 127 TGNENSILAREAVANLDISVAQEACPLGLAPTSSTTATLVMGDALAVALLEARGFSTEDF 186

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MH+GD IP V+    L  A+  +S K  G   V++ G  L
Sbjct: 187 ALSHPGGSLGRRLLLRVTDIMHTGDQIPRVQEDTTLSGALLEISRKGLGMTTVINAGGDL 246

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R   +  D++   + +VM +N +VI +D L   A+ ++ +  I+ L V++
Sbjct: 247 IGVFTDGDLRRTLDRSVDIHNTPIAEVMTRNGRVIHDDQLAAEALNMMEELKINALPVIN 306

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              +  G ++  DLLR G+I
Sbjct: 307 RDGQLTGAINMHDLLRAGVI 326


>gi|319639068|ref|ZP_07993825.1| KpsF/GutQ family Sugar isomerase [Neisseria mucosa C102]
 gi|317399646|gb|EFV80310.1| KpsF/GutQ family Sugar isomerase [Neisseria mucosa C102]
          Length = 324

 Score =  253 bits (647), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 140/311 (45%), Positives = 200/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + ++L       F  A E +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAAALD----HDFVRAAEALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI   D++I +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDHDVVIAISNSGESDEIAAIIPALKRKNITLICITAHPTSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV++    IG +
Sbjct: 254 RRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVVEENGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|169633851|ref|YP_001707587.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii SDF]
 gi|169152643|emb|CAP01638.2| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii]
          Length = 325

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 200/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ +  L +    ++  +F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQAIDVLAT----QIDDRFNRACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+G+ +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGEELPKVSPETPMNQVLYEISNKRLGVTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L Q
Sbjct: 237 IVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNQ 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|154707503|ref|YP_001424157.1| arabinose-5-phosphate isomerase [Coxiella burnetii Dugway
           5J108-111]
 gi|154356789|gb|ABS78251.1| arabinose-5-phosphate isomerase [Coxiella burnetii Dugway
           5J108-111]
          Length = 324

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 194/301 (64%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   +  +F  A   +   KGRVV+ G+GKSGHI  K+A+TLASTGTPSF+VH +EASH
Sbjct: 24  SLHARIDEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLASTGTPSFYVHPSEASH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +S +A  AD V+ + 
Sbjct: 84  GDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQSTLARIADTVIDVS 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP GLAPT+S    L +GDALAIALLE+R F+ NDF  +HPGG LG  L +  +D
Sbjct: 144 VEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTANDFARIHPGGSLGRRLLLHIAD 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T+GD+ R   K  D+
Sbjct: 204 LMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFTDGDLRRTLDKGYDI 263

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   +E VM KN   +    L   A+++++Q+ I+ L+VVD     +G++H  DLLR G+
Sbjct: 264 HRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASPVGVIHMHDLLRAGV 323

Query: 341 I 341
           I
Sbjct: 324 I 324


>gi|163742521|ref|ZP_02149907.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
 gi|161384106|gb|EDQ08489.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
          Length = 323

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 196/320 (61%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A + I  E R L +L   L      +F  AV+ +   +GRV+++GIGKSGHIG K+A
Sbjct: 8   LATARQVITDEARALDALADGLDA----RFAEAVDLVLQAEGRVIVSGIGKSGHIGHKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IPLI 
Sbjct: 64  ATLASTGTPAYFVHPAEASHGDLGMLSKGDVVLAISNSGEAPELANLLSFTRRFGIPLIG 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++S   S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F   +
Sbjct: 124 LSSRMDSTLMKEADVHLQIPALGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFRPEN 183

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGGKLG       D+MH G ++PLV    P+ DA+  +S+K FG   V      L
Sbjct: 184 FRAFHPGGKLGARLSKVDDLMHDGTALPLVGADTPMSDALIEISQKGFGVAGVTGANGTL 243

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-- 321
           +GIIT+GD+ R+    L+  +  DVM  +P  I   +L   A+ ++    I+ L VVD  
Sbjct: 244 QGIITDGDLRRHMDGLLDK-TAADVMTSSPTTIAPGSLAEEAVAIMNDRKITCLFVVDPE 302

Query: 322 -DCQKAIGIVHFLDLLRFGI 340
            D  +A+G++H  D LR G+
Sbjct: 303 GDTAQAVGLLHIHDCLRVGL 322


>gi|254510352|ref|ZP_05122419.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium KLH11]
 gi|221534063|gb|EEE37051.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium KLH11]
          Length = 320

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 201/321 (62%), Gaps = 9/321 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A + I  E R L +L   L      +F  AV+ I    GR++++GIGKSGHIG K
Sbjct: 6   SFLNTARQVITDEARALDTLAEGLD----ERFAQAVDLILQATGRIIVSGIGKSGHIGHK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IPL
Sbjct: 62  IAATLASTGTPAYFVHPAEASHGDLGMVSKGDVVLAISNSGEAPELVNLLAFTRRFGIPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I ++S+ +S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F  
Sbjct: 122 IGLSSKPESTLMKQADVHLLIPSMGEACGFGMVPSISTTLTLAMGDALAIALMKYRDFKP 181

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGGKLG       D+MH  + +P+V  G P+ +A+ ++S+K FG V V D+  
Sbjct: 182 EDFRAYHPGGKLGAQLSTVRDLMH--EDLPVVPAGTPMSEALLVMSQKSFGVVGVTDDAG 239

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L GIIT+GD+ RN    L   S ++VM +NP  I  + +   A+ ++    I+ L VV+
Sbjct: 240 CLLGIITDGDLRRNMEGLLGK-STQEVMTRNPLTIAPNAMAEEAVAIMNDRKITSLFVVE 298

Query: 322 -DCQKAI-GIVHFLDLLRFGI 340
            + Q  + G++H  D LR G+
Sbjct: 299 PEAQGPVQGLLHIHDCLRVGL 319


>gi|260577297|ref|ZP_05845270.1| KpsF/GutQ family protein [Rhodobacter sp. SW2]
 gi|259020478|gb|EEW23801.1| KpsF/GutQ family protein [Rhodobacter sp. SW2]
          Length = 321

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 193/314 (61%), Gaps = 9/314 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R I  E   L+ L + L GE    F  AVE I   +GRV++ G+GKSGHI  K+A+T AS
Sbjct: 14  RVITREADALAMLSAHL-GE---SFGKAVEMILQSQGRVIVCGMGKSGHIARKIAATFAS 69

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+ FVH AEASHGDLGM+ R D++++LS SG + EL  ++ + RRF+IP+I +    
Sbjct: 70  TGTPAQFVHPAEASHGDLGMVMRGDVVLLLSNSGETPELSDMIAHTRRFAIPMIGVAGRE 129

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   AD+ + LP   E+C  G+ PTTS  M LA+GDALAIAL+E R F+ + F + H
Sbjct: 130 GSTLLRQADVAILLPPAAEACDQGIVPTTSTTMTLALGDALAIALMEHRQFTPDQFRIFH 189

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGGKLG       D+MH    +PLV +  P+ +A+  +S + FG V V D    L GI+T
Sbjct: 190 PGGKLGARLTLVRDLMHV--DLPLVPLAAPMSEALLTMSRQGFGVVGVTDADGYLAGIVT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKA 326
           +GD+ R+  + L +L+ E VM + P+ I    L   A+ ++ +  I+ L VVD    + A
Sbjct: 248 DGDLRRHM-EGLLSLTAEQVMTRAPRTIGPQALAEKAVAVMNEKKITSLFVVDPEGSRAA 306

Query: 327 IGIVHFLDLLRFGI 340
           +G++H  D LR G+
Sbjct: 307 VGLIHIHDCLRAGM 320


>gi|291615983|ref|YP_003518725.1| KdsD [Pantoea ananatis LMG 20103]
 gi|291151013|gb|ADD75597.1| KdsD [Pantoea ananatis LMG 20103]
 gi|327396235|dbj|BAK13657.1| arabinose 5-phosphate isomerase KdsD [Pantoea ananatis AJ13355]
          Length = 328

 Score =  253 bits (646), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 199/311 (63%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +    +F   CA+  I A +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLEQLDQYINE--AFADACAL--IYACQGKVVVMGMGKSGHIGKKMAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+ +DD++I +S SG S E+ A++   +R  IPLI +TS  +S +A
Sbjct: 79  FFVHPAEASHGDLGMVGKDDVVIAISNSGESSEILALIPVMKRQKIPLICMTSRPESAMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA++LLE+R F+  DF + HPGG L
Sbjct: 139 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVSLLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD +P V     L DA+  ++ K  G   +VD+  K++GI T+GD+
Sbjct: 199 GRKLLLHVSDIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDDLMKIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D    ++ +VM +    +  + L   A+ L++  NI+ L+V DD  + +G+V
Sbjct: 259 RRIFDMGIDFQHATIAEVMTRGGIRVRPNVLAVDALNLMQTKNITSLLVADD-DRLLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|293608602|ref|ZP_06690905.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829175|gb|EFF87537.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325121584|gb|ADY81107.1| D-arabinose 5-phosphate isomerase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 325

 Score =  253 bits (645), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 199/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ L  L +    ++   F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQALDVLAT----QIGDSFNRACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE + L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L  
Sbjct: 237 IVDEQEHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNL 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|269200087|gb|ACZ28670.1| putative KspF/GutQ family protein [Pseudomonas putida]
          Length = 324

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 143/321 (44%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E+ L   +   F  A E I   KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLE---LEAVEA-LLARIDDNFVKACELILTSKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGIKLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+GD +P V  G  L DA+  +S K  G   +VD   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGDDLPQVSRGTLLKDALLEMSHKGLGMTVIVDADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DREDRPTGALNMHDLLRAGVM 324


>gi|66047369|ref|YP_237210.1| KpsF/GutQ [Pseudomonas syringae pv. syringae B728a]
 gi|63258076|gb|AAY39172.1| KpsF/GutQ [Pseudomonas syringae pv. syringae B728a]
 gi|330969692|gb|EGH69758.1| KpsF/GutQ [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 324

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQNDRPVGAFNLQDLLRAGVM 324


>gi|241661914|ref|YP_002980274.1| KpsF/GutQ family protein [Ralstonia pickettii 12D]
 gi|240863941|gb|ACS61602.1| KpsF/GutQ family protein [Ralstonia pickettii 12D]
          Length = 327

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/300 (44%), Positives = 185/300 (61%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++G+GKSGH+  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 28  LKTQVSADFARAVEMVLGCTGRVVVSGMGKSGHVARKIAATLASTGTPAFFVHPAEASHG 87

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL  IL   +R    LIA+T   +S +  HAD+VL    
Sbjct: 88  DLGMVTRDDVFIGFSNSGEVSELNVILPLVKRLGAKLIAVTGNPESSLGKHADVVLNSHV 147

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP  LAPT S   Q+A+GDALA+A+L++R F   DF   HPGG LG  L     DV
Sbjct: 148 DVEACPLNLAPTASTTAQIALGDALAVAVLDARGFGAEDFARSHPGGSLGRKLLTHVRDV 207

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M +GD+IP V    PL  A+  ++ K     AVVD G +  G+ T+GD+ R     +D  
Sbjct: 208 MRAGDAIPRVNEDTPLSQALMEITRKGMAMTAVVDAGGRAVGVFTDGDLRRLLETPRDWR 267

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T+ + +VM +NP+ +  D L   A++++  H I+ L+VVD     +G +H  DL R  +I
Sbjct: 268 TVPIHEVMHRNPRSVGPDQLAVEAVEVMETHRINQLLVVDAAGLLVGALHIHDLTRAKVI 327


>gi|299770840|ref|YP_003732866.1| Arabinose 5-phosphate isomerase [Acinetobacter sp. DR1]
 gi|298700928|gb|ADI91493.1| Arabinose 5-phosphate isomerase [Acinetobacter sp. DR1]
          Length = 325

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/329 (43%), Positives = 199/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ L  L +    +++  F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQALDVLAT----QINDSFNQACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+  +K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRTDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VDE + L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L  
Sbjct: 237 IVDEQEHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNL 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|160871668|ref|ZP_02061800.1| arabinose 5-phosphate isomerase [Rickettsiella grylli]
 gi|159120467|gb|EDP45805.1| arabinose 5-phosphate isomerase [Rickettsiella grylli]
          Length = 323

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 191/296 (64%), Gaps = 3/296 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L  +F  A E     +G +V+ GIGKSGHIG+K+A+TLASTG+P+FF+HAAEA+H
Sbjct: 23  NLLPQLDSKFERACELFLNCQGHIVVIGIGKSGHIGNKIAATLASTGSPAFFIHAAEANH 82

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI   D+++ +S SG +DEL +IL   +  +IP I +T    S +A  A + L +P
Sbjct: 83  GDLGMINSKDVVLAISHSGETDELISILPTLKFLNIPFILMTGNPNSTLAQQATVTLHIP 142

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+C  GLAPT+S+   L +GDA+AIALL  R FS NDF  +HP G LG  L +  +D
Sbjct: 143 IEQEACSLGLAPTSSSTATLVMGDAIAIALLNRRGFSSNDFAKVHPRGHLGRRLLLKVAD 202

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           +MH+G ++P V+ G PLI  +  +S+KR G   + DE Q+L GI T+GD+ R   + LN 
Sbjct: 203 IMHTGPALPNVRSGTPLIQTLFEISQKRLGMTIITDENQRLLGIFTDGDLRRAIDQGLNL 262

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            T  V+ VM  + K I +D L T A+ L+    I+ L++ D  +K +G+VH  D+L
Sbjct: 263 QTTLVDHVMTAHCKTINKDKLATEALHLMETSKITTLIIADKEKKPLGVVHIHDIL 318


>gi|302185307|ref|ZP_07261980.1| KpsF/GutQ [Pseudomonas syringae pv. syringae 642]
          Length = 324

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTADAEMLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQNDRPVGAFNLQDLLRAGVM 324


>gi|289627575|ref|ZP_06460529.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647001|ref|ZP_06478344.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330869986|gb|EGH04695.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 324

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +SV+A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESVLAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQYDRPVGAFNLQDLLRAGVM 324


>gi|110833418|ref|YP_692277.1| KpsF/GutQ family protein [Alcanivorax borkumensis SK2]
 gi|110646529|emb|CAL16005.1| KpsF/GutQ family protein [Alcanivorax borkumensis SK2]
          Length = 322

 Score =  253 bits (645), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 137/326 (42%), Positives = 200/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    R +  E R + +L+ SL       F  A + +   KGRV++TG+GKSGH+
Sbjct: 1   MSHNHISVGQRVLEIEARAVDALKDSLD----TSFCAACDLMLNAKGRVIVTGMGKSGHV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLA+TLASTGTPSFFVH  EASHGDLGMIT DD+++ LS SG + E+ AIL   +R  
Sbjct: 57  GSKLAATLASTGTPSFFVHPGEASHGDLGMITADDVVLALSNSGETAEVLAILPVIKRKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ +T   +S +A  +D+ LT+    E+CPH LAPT+S    LA+GDALAIALLE+R 
Sbjct: 117 TALVGMTGRPQSALAQLSDVHLTVAVAEEACPHNLAPTSSTTAALAMGDALAIALLEARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG  L +   D+MH+G+ +P+V     L +A+  ++ K  G  A+ 
Sbjct: 177 FTPEDFALSHPGGSLGRRLLLKVDDIMHTGEQLPVVSTTTSLSEALLEMTHKGLGMTAIT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                L GI T+GD+ R   +D++    ++ +VM+ +P  I +  L   A+Q++    I+
Sbjct: 237 HTDGTLAGIFTDGDLRRILDRDIDIRKATIAEVMVSDPITIAQGHLAAEALQIMENRKIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            LMV D   K +G  +  DLLR G++
Sbjct: 297 GLMVCDSDGKPLGAFNMQDLLRAGVV 322


>gi|303230178|ref|ZP_07316946.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303231001|ref|ZP_07317744.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514383|gb|EFL56382.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302515104|gb|EFL57078.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 323

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 137/299 (45%), Positives = 189/299 (63%), Gaps = 6/299 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  AV  I A KGRVV TG+GKSGHIG K+A+TLASTGTP+ F+H  E  HGDLGM
Sbjct: 25  LDQSFVNAVNMILACKGRVVCTGMGKSGHIGRKIAATLASTGTPALFMHPGEGVHGDLGM 84

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           IT DD+++  S SG + E+  IL   RR    LI +  + +S +A ++D+VL    E E+
Sbjct: 85  ITEDDVVLAFSNSGETGEIIGILPSLRRIGAKLICVVGKPESTLAKNSDVVLLAQVEREA 144

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP GLAPTTS  + LA+GDALA+ LLE  +F+  +F V HPGG LG  L +   ++MH G
Sbjct: 145 CPLGLAPTTSTTVALALGDALAVCLLERHHFTPENFAVFHPGGSLGRRLLLTVENIMHGG 204

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--V 285
           +  P+V  G  + DA+ +++EK  G  +V+DE   L G++T+GD+ R      N L   V
Sbjct: 205 EDNPVVHKGATVRDALFVMTEKGLGATSVIDEDGHLIGLVTDGDVRRGLDSGSNFLEWPV 264

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ED+M   P+ I +D L   A+ ++ ++    I+VL VVD+   A+GIVH  DLLR GI+
Sbjct: 265 EDMMTNMPRTITKDKLAAEALHVMEKNQPRPITVLPVVDEEGHAMGIVHITDLLRRGIV 323


>gi|225024071|ref|ZP_03713263.1| hypothetical protein EIKCOROL_00939 [Eikenella corrodens ATCC
           23834]
 gi|224943096|gb|EEG24305.1| hypothetical protein EIKCOROL_00939 [Eikenella corrodens ATCC
           23834]
          Length = 324

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 151/317 (47%), Positives = 210/317 (66%), Gaps = 8/317 (2%)

Query: 29  RSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R ++A E   L +L  SL G  SF   C  E + A +GRVV++GIGKSGHIG K+A+TLA
Sbjct: 12  REVLAIEADALRALSDSLDG--SFSRAC--EAVLACEGRVVVSGIGKSGHIGRKIAATLA 67

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+  IL   +R +I LI +T  
Sbjct: 68  STGTPAFFVHPAEAAHGDLGMIVDGDVVLAISNSGESDEIAVILPALKRKNITLIGMTGR 127

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +S +A HADI LT+    E+CP GLAPT+S    LA+GDALA+ALL +R F+ +DF + 
Sbjct: 128 PESTLARHADIHLTVAVPQEACPLGLAPTSSTTAALALGDALAVALLRARAFTPDDFALS 187

Query: 208 HPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HP G LG  L +  +DVMHSGD +P+V++  P  D I  +SEK  G VAV DE   LKGI
Sbjct: 188 HPAGSLGKRLLLQVADVMHSGDELPVVRLDTPFADLIVCMSEKGLGMVAVADEAGYLKGI 247

Query: 267 ITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            T+GD+ R F   +DL+ L+ + VM  +PK I  + L T A++ ++Q+ ++ L V D+  
Sbjct: 248 FTDGDLRRLFQQQRDLSGLTAQAVMGAHPKTITPNRLATEALKTMQQNRVNGLPVCDEAG 307

Query: 325 KAIGIVHFLDLLRFGII 341
           + +G ++  DLL+  I+
Sbjct: 308 RLLGALNMHDLLKARIV 324


>gi|225848092|ref|YP_002728255.1| sugar isomerase, KpsF/GutQ family [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644282|gb|ACN99332.1| sugar isomerase, KpsF/GutQ family [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 318

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 138/315 (43%), Positives = 204/315 (64%), Gaps = 9/315 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           ++I  E R L+ L+  L       F  AV+ I   +G+V+ITG+GKSG IG K+A+T++S
Sbjct: 11  QTIEEEIRALNRLKECLDE----SFEKAVKLILEAQGKVIITGMGKSGLIGKKIAATMSS 66

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FF+H AEA HGDLGM+ + DLII +S SG + EL AI+   +R+   +IAIT++ 
Sbjct: 67  TGTPAFFLHPAEALHGDLGMVEKKDLIIAISNSGETPELLAIIPILKRWGNKIIAITNKR 126

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +  +AD+ L L  + E+CP  LAPT+S+   L +GDALA+ALL  RNF+  +F + H
Sbjct: 127 DSSLTKYADVSLYLNVDKEACPLNLAPTSSSTATLVLGDALAVALLRLRNFTPENFAMFH 186

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG LG   +  +D+M     +P+V    PL +A+ ++SEK  G   V+D+   L GIIT
Sbjct: 187 PGGSLGKKLMKVADIMRK--DLPIVCEDTPLKEAVIVMSEKGLGSTLVLDKDNNLTGIIT 244

Query: 269 EGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GD+ R  N  K ++    +D M KNPK    D L+  A++L+ +HNI+VL VV+D +K 
Sbjct: 245 DGDLRRFINKGKSIDNSLSKDAMTKNPKTASPDWLVLQALELMERHNITVLPVVED-KKP 303

Query: 327 IGIVHFLDLLRFGII 341
           +GI+H  D+L+ G+I
Sbjct: 304 VGIIHIHDILKSGVI 318


>gi|225075760|ref|ZP_03718959.1| hypothetical protein NEIFLAOT_00776 [Neisseria flavescens
           NRL30031/H210]
 gi|224952926|gb|EEG34135.1| hypothetical protein NEIFLAOT_00776 [Neisseria flavescens
           NRL30031/H210]
          Length = 324

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 201/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + ++L       F  A E +   KGRVVI G+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLHEIAAALDD----NFVHAAEALLHCKGRVVIAGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLICITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +DF + HP G L
Sbjct: 134 HHADIHITASVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV++    IG +
Sbjct: 254 RRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVVEENGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLMARIV 324


>gi|167031979|ref|YP_001667210.1| KpsF/GutQ family protein [Pseudomonas putida GB-1]
 gi|166858467|gb|ABY96874.1| KpsF/GutQ family protein [Pseudomonas putida GB-1]
          Length = 324

 Score =  252 bits (644), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E+ L   +   F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLE---LEAVEA-LLARIDDNFVKACELILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGIKLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD +P V  G  L DA+  +S K  G   +V+   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDELPQVPRGTLLKDALLEMSRKGLGMTVIVEPDGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  H I  L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DREDRPTGALNMHDLLRAGVM 324


>gi|313497326|gb|ADR58692.1| KpsF/GutQ family protein [Pseudomonas putida BIRD-1]
          Length = 324

 Score =  252 bits (644), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E+ L   +   F  A + I   KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLE---LEAVEA-LLARIDDNFVKACKVILTSKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGIKLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+GD +P V  G  L DA+  +S K  G   +V+   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTPIDQVMTVHGKTARADMLAAEALKIMEDHKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DREDRPTGALNMHDLLRAGVM 324


>gi|92114343|ref|YP_574271.1| KpsF/GutQ family protein [Chromohalobacter salexigens DSM 3043]
 gi|91797433|gb|ABE59572.1| KpsF/GutQ family protein [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score =  252 bits (643), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 137/316 (43%), Positives = 194/316 (61%), Gaps = 7/316 (2%)

Query: 33  AEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           A  R   +LES    +L   L   F  A +   A +GR+++TG+GKSGHI  K+A+TLAS
Sbjct: 11  ASARRTLTLESHAVAALIERLDEAFDHACQLFLACEGRIIVTGMGKSGHIARKIAATLAS 70

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+F+VH  EASHGD+GMIT  D+++ LS SG + E+ A+L   +R   PL+++T   
Sbjct: 71  TGTPAFYVHPGEASHGDMGMITARDVVLALSNSGETAEVTALLPLLKRMGTPLVSMTGRP 130

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A HA+  L    + E+CP  LAPT S    LA+GDALA+ALLE+R F+  DF + H
Sbjct: 131 GSSLARHAEAHLDTAVDREACPLDLAPTASTTAALAMGDALAVALLEARGFTAEDFALSH 190

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +   D+MH GD +P V +G PL DA+  ++ +  G   V+DE  +L G+ 
Sbjct: 191 PGGSLGRRLLLKVEDLMHQGDRLPRVALGSPLRDALLEITRQGLGFTCVLDEDGRLAGVY 250

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R  + H DL  L V+DVM    K I    L   A++++  + I+ L VVDD   
Sbjct: 251 TDGDLRRTLDHHDDLRQLRVDDVMTHGGKTIRPQLLAAEAVKIMEDNRITALAVVDDQGH 310

Query: 326 AIGIVHFLDLLRFGII 341
            +G++H  DLL  G+I
Sbjct: 311 PVGVLHMHDLLASGVI 326


>gi|330807559|ref|YP_004352021.1| arabinose 5-phosphate isomerase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375667|gb|AEA67017.1| arabinose 5-phosphate isomerase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 324

 Score =  252 bits (643), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   +  +    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLELEAVQGLLPQIDAD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTTAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIITLLPLIKRLGIQLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 MTGNPDSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+G  +P V  G  L DA+  ++ K  G   V++   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGQELPQVLRGTLLKDALMEMTRKGLGMTVVLEVDGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+++ ++E VM  + K    + L   A++++  H IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRTIDIHSATIEQVMTPHGKTARAEMLAAEALKIMEDHKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           DD  + +G ++  DLLR G++
Sbjct: 304 DDEDRPVGALNMHDLLRAGVM 324


>gi|312897538|ref|ZP_07756958.1| putative arabinose 5-phosphate isomerase [Megasphaera
           micronuciformis F0359]
 gi|310621390|gb|EFQ04930.1| putative arabinose 5-phosphate isomerase [Megasphaera
           micronuciformis F0359]
          Length = 323

 Score =  252 bits (643), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 140/322 (43%), Positives = 201/322 (62%), Gaps = 10/322 (3%)

Query: 30  SIIAEKRGLSSLESS----LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           +I+ E R +  +E++    L   L  +F  AV  I   +GRV++TG+GKSGHI  K+A+T
Sbjct: 2   NILEEAREVLRVEAAGIERLIPTLDQRFVNAVNMIFESRGRVIVTGMGKSGHIARKVAAT 61

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FF+H AEA HGDLGM+T DD ++  S SG + E+  IL   +R    LIA+ 
Sbjct: 62  LASTGTPAFFLHPAEAIHGDLGMVTIDDTVLAFSNSGETTEILNILPSLKRIGPKLIAVV 121

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADIVL +  E E+CP GLAPTTS  + LA+GDALA+ALL++ NF+++ F 
Sbjct: 122 GNMNSTLAKTADIVLDVTVEKEACPLGLAPTTSTTVALALGDALAVALLQAHNFTKDQFA 181

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           V HPGG LG  L +   DVMH G   P++     + DA+ +++EK  G VAV  E   L 
Sbjct: 182 VFHPGGALGKKLLLTVKDVMHKGVDNPVIGEESTVQDALFMMTEKGLGAVAVTREDGTLA 241

Query: 265 GIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMV 319
           G++T+GD+ R      N L   V+ +M KNP+ I +D L   A+ ++ ++    I+VL V
Sbjct: 242 GLVTDGDVRRGLETGSNFLQWPVDAMMTKNPRRISQDKLAAEALHIMEKNQPRPITVLPV 301

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           +D+  K  G++H  DLLR G++
Sbjct: 302 IDENDKVTGMIHLTDLLRQGVV 323


>gi|71737849|ref|YP_276268.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483487|ref|ZP_05637528.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|298488496|ref|ZP_07006526.1| Arabinose 5-phosphate isomerase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|71558402|gb|AAZ37613.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298156837|gb|EFH97927.1| Arabinose 5-phosphate isomerase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322488|gb|EFW78581.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330043|gb|EFW86030.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888615|gb|EGH21276.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330987096|gb|EGH85199.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011540|gb|EGH91596.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 324

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQYDRPVGAFNLQDLLRAGVM 324


>gi|330875119|gb|EGH09268.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 324

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 141/321 (43%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEKLAAEALKIMEDNKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G  +  DLLR G++
Sbjct: 304 DQYDRPVGAFNLQDLLRAGVM 324


>gi|268595486|ref|ZP_06129653.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae 35/02]
 gi|291043079|ref|ZP_06568802.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae DGI2]
 gi|293398417|ref|ZP_06642595.1| arabinose-5-phosphate isomerase [Neisseria gonorrhoeae F62]
 gi|268548875|gb|EEZ44293.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae 35/02]
 gi|291012685|gb|EFE04668.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae DGI2]
 gi|291610888|gb|EFF39985.1| arabinose-5-phosphate isomerase [Neisseria gonorrhoeae F62]
          Length = 332

 Score =  252 bits (643), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 26  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 81

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 82  FFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 141

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 142 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 201

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 202 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 261

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 262 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 321

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 322 NMHDLLAARIV 332


>gi|296840823|ref|ZP_06863527.2| arabinose 5-phosphate isomerase [Neisseria polysaccharea ATCC
           43768]
 gi|296839819|gb|EFH23757.1| arabinose 5-phosphate isomerase [Neisseria polysaccharea ATCC
           43768]
          Length = 351

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/312 (43%), Positives = 202/312 (64%), Gaps = 7/312 (2%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE  GL  + +    EL   F  A + +   KGRVVITG+GKSGH+G K+A+T+ASTGTP
Sbjct: 44  AEAEGLREIAA----ELDKNFVLAADALLHCKGRVVITGMGKSGHVGRKIAATMASTGTP 99

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +
Sbjct: 100 AFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPGSTM 159

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G 
Sbjct: 160 ARYADIHITASVSQEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGS 219

Query: 213 LGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD
Sbjct: 220 LGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQCRLKGVFTDGD 279

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R F +  +   LS+++VM   PK I  + L T A+++++ ++++ L+V D      G 
Sbjct: 280 LRRLFQECDNFTGLSIDEVMHTQPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGA 339

Query: 330 VHFLDLLRFGII 341
           ++  DLL   I+
Sbjct: 340 LNMHDLLAARIV 351


>gi|83647978|ref|YP_436413.1| sugar phosphate isomerase [Hahella chejuensis KCTC 2396]
 gi|83636021|gb|ABC31988.1| predicted sugar phosphate isomerase involved in capsule formation
           [Hahella chejuensis KCTC 2396]
          Length = 325

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 208/321 (64%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R+I  E + + +L S +       F  A + +   KGRVV+TG+GKSGHIG+K+A
Sbjct: 9   IKAARRTIEMEVQAVQALSSRIDD----AFIKACDLMLNCKGRVVVTGMGKSGHIGNKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFF+H  EASHGDLGM+T +D+++ +S SG++ E+  IL   +R  +PL++
Sbjct: 65  ATLASTGTPSFFLHPGEASHGDLGMVTPNDVVLAISNSGNTAEIVTILPLLKRMGVPLVS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T +  S ++  A+  +      E+CP GLAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 125 MTGKPDSTLSQIAEANIDASVATEACPLGLAPTSSTTVCLVLGDALAIALLEARGFTAED 184

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +  SD+MHSGD++P+V+ G  L +++  +S+K  G   +VDE  K
Sbjct: 185 FAFSHPGGALGRRLLLKISDIMHSGDAVPVVRSGASLSESLLQMSQKGLGMTCIVDEDDK 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   K  D+ + +++ VM  + K + +D L   A+ L+++  I+ L VV
Sbjct: 245 LLGVFTDGDLRRTLDKNIDIRSCAIDVVMTTHCKSVTKDMLAAEALGLMQEKKINALPVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D  +K IG  +  D+LR G+I
Sbjct: 305 DADKKVIGAFNTQDMLRAGVI 325


>gi|59801937|ref|YP_208649.1| KpsF [Neisseria gonorrhoeae FA 1090]
 gi|59718832|gb|AAW90237.1| putative polysialic acid capsule expression protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 351

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 161 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 281 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|239999673|ref|ZP_04719597.1| KpsF [Neisseria gonorrhoeae 35/02]
 gi|240014850|ref|ZP_04721763.1| KpsF [Neisseria gonorrhoeae DGI18]
 gi|240017296|ref|ZP_04723836.1| KpsF [Neisseria gonorrhoeae FA6140]
 gi|240113274|ref|ZP_04727764.1| KpsF [Neisseria gonorrhoeae MS11]
 gi|240116372|ref|ZP_04730434.1| KpsF [Neisseria gonorrhoeae PID18]
 gi|240118660|ref|ZP_04732722.1| KpsF [Neisseria gonorrhoeae PID1]
 gi|240121369|ref|ZP_04734331.1| KpsF [Neisseria gonorrhoeae PID24-1]
 gi|240124204|ref|ZP_04737160.1| KpsF [Neisseria gonorrhoeae PID332]
 gi|240126406|ref|ZP_04739292.1| KpsF [Neisseria gonorrhoeae SK-92-679]
 gi|240128871|ref|ZP_04741532.1| KpsF [Neisseria gonorrhoeae SK-93-1035]
 gi|254494389|ref|ZP_05107560.1| sugar isomerase [Neisseria gonorrhoeae 1291]
 gi|260439809|ref|ZP_05793625.1| KpsF [Neisseria gonorrhoeae DGI2]
 gi|268599354|ref|ZP_06133521.1| sugar isomerase [Neisseria gonorrhoeae MS11]
 gi|268602039|ref|ZP_06136206.1| sugar isomerase [Neisseria gonorrhoeae PID18]
 gi|268604373|ref|ZP_06138540.1| sugar isomerase [Neisseria gonorrhoeae PID1]
 gi|268682830|ref|ZP_06149692.1| sugar isomerase [Neisseria gonorrhoeae PID332]
 gi|268684991|ref|ZP_06151853.1| sugar isomerase [Neisseria gonorrhoeae SK-92-679]
 gi|268687253|ref|ZP_06154115.1| sugar isomerase [Neisseria gonorrhoeae SK-93-1035]
 gi|226513429|gb|EEH62774.1| sugar isomerase [Neisseria gonorrhoeae 1291]
 gi|268583485|gb|EEZ48161.1| sugar isomerase [Neisseria gonorrhoeae MS11]
 gi|268586170|gb|EEZ50846.1| sugar isomerase [Neisseria gonorrhoeae PID18]
 gi|268588504|gb|EEZ53180.1| sugar isomerase [Neisseria gonorrhoeae PID1]
 gi|268623114|gb|EEZ55514.1| sugar isomerase [Neisseria gonorrhoeae PID332]
 gi|268625275|gb|EEZ57675.1| sugar isomerase [Neisseria gonorrhoeae SK-92-679]
 gi|268627537|gb|EEZ59937.1| sugar isomerase [Neisseria gonorrhoeae SK-93-1035]
          Length = 324

 Score =  251 bits (642), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 134 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|194099435|ref|YP_002002537.1| KpsF [Neisseria gonorrhoeae NCCP11945]
 gi|193934725|gb|ACF30549.1| KpsF [Neisseria gonorrhoeae NCCP11945]
 gi|317164936|gb|ADV08477.1| KpsF [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 326

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 136 RHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|332525680|ref|ZP_08401829.1| KpsF/GutQ family protein [Rubrivivax benzoatilyticus JA2]
 gi|332109239|gb|EGJ10162.1| KpsF/GutQ family protein [Rubrivivax benzoatilyticus JA2]
          Length = 329

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 139/325 (42%), Positives = 196/325 (60%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSL-ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
              ++ A R+   E R L  L E   +G     F  AV+ +   +GRVV+ G+GKSGH+G
Sbjct: 10  QRALELAARTFEIEARALLGLAERQREG-----FPAAVQAMLECRGRVVVMGMGKSGHVG 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+FFVH AEASHGDLGM+   D+++ +S SG  DEL AIL   RR  +
Sbjct: 65  RKIAATLASTGTPAFFVHPAEASHGDLGMLIAGDVVLAISNSGEVDELAAILPALRRLGV 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I +T +  S +A H+D VL+   + E+CP  LAPT S   Q+A+GDALA+ALL++R F
Sbjct: 125 TIIGMTGKPGSTLARHSDHVLSCAVDQEACPLNLAPTASTTAQIALGDALAVALLDARGF 184

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            E DF   HPGG LG  L +   D+M SGD++P V  G    D +  ++ K  G  A+VD
Sbjct: 185 REEDFARSHPGGSLGRKLLMHVRDLMRSGDAVPRVDAGASFADVLREMTRKGLGFTALVD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +  GI T+GD+ R   +  DL  L+  DVM   P++I ED L   A  L+ QH I+ 
Sbjct: 245 ADGRPVGIFTDGDLRRLIERGADLRDLTAGDVMHAGPRLIAEDALAVDAAGLMEQHRITS 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ VD   + +G ++  DL+R  +I
Sbjct: 305 VLAVDAEGRLVGALNSNDLMRAKVI 329


>gi|262278508|ref|ZP_06056293.1| sugar phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
 gi|262258859|gb|EEY77592.1| sugar phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
          Length = 325

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 141/329 (42%), Positives = 199/329 (60%), Gaps = 12/329 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N T     AL ++  E++ L  L +    +++  F+ A E +   KGRVVITG+GKSG
Sbjct: 1   MPNPTDFQSSALATLRIEQQALDVLAT----QINDSFNQACEILLQCKGRVVITGMGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   + 
Sbjct: 57  HIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKH 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI I+  +K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+
Sbjct: 117 LGVPLITISRTDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEA 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   
Sbjct: 177 RGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKRLGLTT 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           +VD+ + L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+Q L  
Sbjct: 237 IVDDEEHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEALQQLNL 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             IS  +VVDD  K IG++   DL++ G+
Sbjct: 296 KKISQFVVVDDQNKVIGVISMHDLIQAGV 324


>gi|21243694|ref|NP_643276.1| polysialic acid capsule expression protein [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|21109275|gb|AAM37812.1| polysialic acid capsule expression protein [Xanthomonas axonopodis
           pv. citri str. 306]
          Length = 333

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 139/342 (40%), Positives = 203/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    +L     V    R +  E+  L+S+ +     +  +F  A   +  
Sbjct: 1   MAVSHLPSATVSDATL-----VASGQRVLEIEREALASVGA----RIGREFAAACRLVLT 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD    L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADGHLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|269797607|ref|YP_003311507.1| KpsF/GutQ family protein [Veillonella parvula DSM 2008]
 gi|282850054|ref|ZP_06259436.1| arabinose 5-phosphate isomerase [Veillonella parvula ATCC 17745]
 gi|294793355|ref|ZP_06758500.1| arabinose 5-phosphate isomerase [Veillonella sp. 6_1_27]
 gi|294795174|ref|ZP_06760308.1| arabinose 5-phosphate isomerase [Veillonella sp. 3_1_44]
 gi|269094236|gb|ACZ24227.1| KpsF/GutQ family protein [Veillonella parvula DSM 2008]
 gi|282580243|gb|EFB85644.1| arabinose 5-phosphate isomerase [Veillonella parvula ATCC 17745]
 gi|294453966|gb|EFG22341.1| arabinose 5-phosphate isomerase [Veillonella sp. 3_1_44]
 gi|294455786|gb|EFG24151.1| arabinose 5-phosphate isomerase [Veillonella sp. 6_1_27]
          Length = 323

 Score =  251 bits (642), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 191/314 (60%), Gaps = 10/314 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R +  L S     L   F  AV  I A KGRVV TG+GKSGHIG K+A+TLASTGTP+
Sbjct: 14  EARAIEELSS----RLDHNFVNAVNMILACKGRVVCTGMGKSGHIGRKIAATLASTGTPA 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    LI +  + +S +A
Sbjct: 70  LFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKLICVVGKPESTLA 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+  +F V HPGG L
Sbjct: 130 KNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTPENFAVFHPGGSL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE   L G++T+GD+
Sbjct: 190 GRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEEGHLLGLVTDGDV 249

Query: 273 FRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAI 327
            R      N L   VED+M   P+ I +D L   A+ L+ ++    I+VL VVD     +
Sbjct: 250 RRGLDSGSNFLEWPVEDMMTSMPRTITKDKLAAEALHLMEKNQPRPITVLPVVDTNNVCL 309

Query: 328 GIVHFLDLLRFGII 341
           GIVH  DLLR GI+
Sbjct: 310 GIVHITDLLRRGIV 323


>gi|238927531|ref|ZP_04659291.1| arabinose-5-phosphate isomerase [Selenomonas flueggei ATCC 43531]
 gi|238884813|gb|EEQ48451.1| arabinose-5-phosphate isomerase [Selenomonas flueggei ATCC 43531]
          Length = 326

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/330 (41%), Positives = 201/330 (60%), Gaps = 11/330 (3%)

Query: 19  MKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           M+ ST+ Q A+ ++  E   ++ L   +  +    F  A   I A KGRVV+TG+GKSGH
Sbjct: 1   MQESTIRQKAVETLKLEADAVARLTERVDKD----FEAAANAILACKGRVVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTADDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA++   KS +   AD  + +  E E+CP GLAPT S    LA+GDALA+AL+  R
Sbjct: 117 GARIIAMSGRRKSQLGRSADFYIDIGVEREACPLGLAPTASTTATLAMGDALAMALMAVR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG  L +  ++VMH+GD  P+V       DA+ ++++K  G V+V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGDENPVVPYHTTAKDALFVMTDKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD   L   VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDADGKFIGLVTDGIIRRALAKDYTFLDKDVESIMFAAPLTIAPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+D+    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVIDEAGVPVGIVHLTDLLRQGVV 326


>gi|269213816|ref|ZP_05982911.2| arabinose 5-phosphate isomerase [Neisseria cinerea ATCC 14685]
 gi|269145443|gb|EEZ71861.1| arabinose 5-phosphate isomerase [Neisseria cinerea ATCC 14685]
          Length = 326

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 200/311 (64%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 20  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+  I+   +R  I L+ IT+   S +A
Sbjct: 76  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAVIIPALKRKDITLVCITARPDSTMA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 136 RHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 195

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 196 GKRLLLRVADIMHKGCGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQCRLKGVFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 256 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 315

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 316 NMHDLLAARIV 326


>gi|134096259|ref|YP_001101334.1| D-arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans]
 gi|133740162|emb|CAL63213.1| Arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans]
          Length = 342

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 194/321 (60%), Gaps = 3/321 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E   + +L+  +  E   QF  AV  +    GRVV++GIGKSGHI  K+A
Sbjct: 22  LQFARDTLQIEADAILALKQRISNESGEQFIQAVALLLNCTGRVVVSGIGKSGHIARKIA 81

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           STLASTGTP+ FVHAAEASHGDLGMIT DD +I +S+SG + EL AI+   +R    LI 
Sbjct: 82  STLASTGTPALFVHAAEASHGDLGMITADDALIAISYSGEAGELVAIVPIIKRMGATLIT 141

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT  + S +A  AD+ L +  + E+CP  LAPT S    LAIGDALA+ALL++R F E D
Sbjct: 142 ITGNDDSTLAQLADVHLNVRVDKEACPLNLAPTASTTATLAIGDALAVALLDARGFGEED 201

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L     DVM +GD+IP V     L  A+  +S K     AVVD G +
Sbjct: 202 FARSHPGGALGRRLLTHVRDVMRTGDAIPTVGKDASLYTALLEISRKGMAMTAVVDAGGR 261

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             G+ T+GD+ R     +D +TLS+ +VM  NP+ +  D L   A++++ +  I+ L+V 
Sbjct: 262 AIGVFTDGDLRRLIENQRDFSTLSIAEVMHANPRSVQPDQLAVDAVKMMEEFRINQLLVT 321

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +   K +G +H  DL R  +I
Sbjct: 322 NADGKLVGALHIHDLTRAKVI 342


>gi|153208981|ref|ZP_01947187.1| arabinose-5-phosphate isomerase [Coxiella burnetii 'MSU Goat Q177']
 gi|165923986|ref|ZP_02219818.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 334]
 gi|212212785|ref|YP_002303721.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuG_Q212]
 gi|212219026|ref|YP_002305813.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuK_Q154]
 gi|120575581|gb|EAX32205.1| arabinose-5-phosphate isomerase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916572|gb|EDR35176.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 334]
 gi|212011195|gb|ACJ18576.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuG_Q212]
 gi|212013288|gb|ACJ20668.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuK_Q154]
          Length = 324

 Score =  251 bits (641), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 194/301 (64%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   +  +F  A   +   KGRVV+ G+GKSGHI  K+A+TLASTGTPSF+VH +EASH
Sbjct: 24  SLHARIDEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLASTGTPSFYVHPSEASH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +S +A  AD V+ + 
Sbjct: 84  GDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQSTLARIADTVIDVS 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP GLAPT+S    L +GDALAIALLE+R F+ +DF  +HPGG LG  L +  +D
Sbjct: 144 VEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTADDFARIHPGGSLGRRLLLHIAD 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T+GD+ R   K  D+
Sbjct: 204 LMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFTDGDLRRTLDKGYDI 263

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   +E VM KN   +    L   A+++++Q+ I+ L+VVD     +G++H  DLLR G+
Sbjct: 264 HRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASPVGVIHMHDLLRAGV 323

Query: 341 I 341
           I
Sbjct: 324 I 324


>gi|70728302|ref|YP_258051.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf-5]
 gi|68342601|gb|AAY90207.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf-5]
          Length = 324

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E + +  L   +  +    F  A E I A KGRVV+ G+GKSGH+G+K+A
Sbjct: 8   IQSAQRTIRLELQAVEGLLPHIDAD----FVRACEMILASKGRVVVVGMGKSGHVGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTTAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGIQLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  AD+ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 LTGNPESPLAKAADVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH G  +P V+ G  L DA+  ++ K  G   +++   +
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHEGSDLPQVQRGTLLKDALMEMTRKGLGMTVILEADGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D++  +++ VM  + K    D L   A++++  H IS L+VV
Sbjct: 244 LAGIFTDGDLRRTLDRAIDIHHATIDSVMTPHGKTARADMLAAEALKIMEDHKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + IG ++  DLLR G++
Sbjct: 304 DKEDRPIGALNMHDLLRAGVM 324


>gi|89093952|ref|ZP_01166897.1| hypothetical protein MED92_01609 [Oceanospirillum sp. MED92]
 gi|89081838|gb|EAR61065.1| hypothetical protein MED92_01609 [Oceanospirillum sp. MED92]
          Length = 323

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 139/318 (43%), Positives = 194/318 (61%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R+I  E   +S L   L    SF   C +  +    GRV++TG+GKSGHIG K+A+TL
Sbjct: 10  ARRTIKLEAEAVSDLLDFLDD--SFNQACKI--MLNCSGRVIVTGMGKSGHIGKKIAATL 65

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGMIT +D++I LS SG + E+  I+   +R + PLI+IT+
Sbjct: 66  ASTGTPAFFVHPGEASHGDLGMITPNDVVIALSNSGETAEVVTIIPLLKRMNTPLISITA 125

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S ++   D  L +  E E+CP  LAPT+S   QL +GDALAIALLE++ FS  DF  
Sbjct: 126 NPASTLSSAGDANLHIGVEKEACPLDLAPTSSTTAQLVLGDALAIALLEAKGFSAEDFAF 185

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  SD+MH+   IP V  G PL DA+  ++ KR G   +VD+   L+G
Sbjct: 186 SHPGGSLGRRLLLKVSDIMHADQDIPKVLSGTPLKDALIEVTRKRLGMTTIVDQNNVLQG 245

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +  DL T S++ VM  +   +  + L    +Q++ Q  I+ L+V D  
Sbjct: 246 IFTDGDLRRALDQNVDLQTTSIDAVMTPDGTTVTAEMLAAECLQIMEQRKINALIVTDQD 305

Query: 324 QKAIGIVHFLDLLRFGII 341
              +G ++  DLL+ G+I
Sbjct: 306 NHPVGALNMHDLLKAGVI 323


>gi|268597175|ref|ZP_06131342.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae FA19]
 gi|268550963|gb|EEZ45982.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae FA19]
          Length = 332

 Score =  251 bits (640), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 26  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 81

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 82  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 141

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +      E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 142 RHADIHIPASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 201

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 202 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 261

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 262 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 321

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 322 NMHDLLAARIV 332


>gi|229588431|ref|YP_002870550.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens SBW25]
 gi|229360297|emb|CAY47154.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens SBW25]
          Length = 324

 Score =  251 bits (640), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 204/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   L ++E  L   +   F  A E I A KGRVV+ G+GKSGH+G+K+A
Sbjct: 8   IQSAQRTIRLE---LEAVEG-LLAHIDADFVRACEMILASKGRVVVVGMGKSGHVGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMIT+DD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTAFFVHPAEASHGDMGMITKDDIILALSNSGSTNEIVTLLPLIKRLGIQMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  A++ L +  + E+CP  LAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 124 ITGNPESTLAKAAEVNLNVHVDHEACPLNLAPTSSTTAALVMGDALAVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD +P V+ G  L DA+  ++ K  G   +++   +
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDELPHVQRGTLLKDALMEMTRKGLGMTVILEADGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D++T S++ VM  + K    + L   A++++  H I  L+VV
Sbjct: 244 LAGVFTDGDLRRTLDRTIDIHTASIDAVMTPHGKTARPEMLAAEALKIMEDHKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + IG ++  DLLR G++
Sbjct: 304 DGDDRPIGALNMHDLLRAGVM 324


>gi|313894626|ref|ZP_07828189.1| arabinose 5-phosphate isomerase [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313440816|gb|EFR59245.1| arabinose 5-phosphate isomerase [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 323

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/314 (45%), Positives = 191/314 (60%), Gaps = 10/314 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R +  L S     L   F  AV  I A KGRVV TG+GKSGHIG K+A+TLASTGTP+
Sbjct: 14  EARAIEELSS----RLDHNFVNAVNMILACKGRVVCTGMGKSGHIGRKIAATLASTGTPA 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    LI +  + +S +A
Sbjct: 70  LFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKLICVVGKPESTLA 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+  +F V HPGG L
Sbjct: 130 KNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTPENFAVFHPGGSL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE   L G++T+GD+
Sbjct: 190 GRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEEGHLLGLVTDGDV 249

Query: 273 FRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAI 327
            R      N L   VED+M   P+ I +D L   A+ L+ ++    I+VL VVD     +
Sbjct: 250 RRGLDSGSNFLEWPVEDMMTVMPRTITKDKLAAEALHLMEKNQPRPITVLPVVDGNNVCL 309

Query: 328 GIVHFLDLLRFGII 341
           GIVH  DLLR GI+
Sbjct: 310 GIVHITDLLRRGIV 323


>gi|240081064|ref|ZP_04725607.1| KpsF [Neisseria gonorrhoeae FA19]
          Length = 324

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    EL   F  A + +   KGRVVITG+GKSGHIG K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----ELDENFVLAADALLHCKGRVVITGMGKSGHIGRKMAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIIPALKRKDITLVCITARPDSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            HADI +      E+CP GLAPTTS    +A+GDALA+ LL +R F+ +DF ++HP G L
Sbjct: 134 RHADIHIPASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTPDDFALIHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D    LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTDGQGCLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+V D      G +
Sbjct: 254 RRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLLVTDADGVLTGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|91774493|ref|YP_544249.1| KpsF/GutQ family protein [Methylobacillus flagellatus KT]
 gi|91708480|gb|ABE48408.1| KpsF/GutQ family protein [Methylobacillus flagellatus KT]
          Length = 335

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 152/326 (46%), Positives = 199/326 (61%), Gaps = 4/326 (1%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLE-SSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           G S +K S     L  +  E   + + E  +L G L   F  AVE I   +GRVV+TGIG
Sbjct: 5   GISKLKPSNSATTLLQLAREVLAIEAREVQALAGRLDQSFVNAVELILQCRGRVVVTGIG 64

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG+K+A+TLASTGTP+FF+H AEASHGDLGMITRDD++I LS SG +DEL A+L  
Sbjct: 65  KSGHIGNKIAATLASTGTPAFFMHPAEASHGDLGMITRDDVVIALSNSGEADELLALLPP 124

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R   P+I+I+    S ++  ADI L      E+CP GLAPT S    LA+GDALA+ L
Sbjct: 125 LKRIGTPIISISGNRHSTLSKAADIFLDAHVSQEACPLGLAPTASTTAALALGDALAVTL 184

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L+ R FS  DF + HPGG +G  L +   DVM SGD IP V +   L D +  +S K  G
Sbjct: 185 LDQRGFSREDFALAHPGGSIGRRLLLHVQDVMRSGDDIPAVSVSSSLKDGLLEMSRKGLG 244

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             AV+D   K  GI T+GD+ R F    D+N   + DVM  +P+ IL   L   A+ L+ 
Sbjct: 245 MTAVLDAADKPVGIFTDGDLRRAFEAGIDINGTRMADVMHAHPRSILPGQLAVDALALME 304

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
           Q++IS L+VVD     +G ++  DLL
Sbjct: 305 QYSISSLLVVDQQGNLVGALNMHDLL 330


>gi|163749273|ref|ZP_02156522.1| carbohydrate isomerase, KpsF/GutQ family protein [Shewanella
           benthica KT99]
 gi|161330992|gb|EDQ01918.1| carbohydrate isomerase, KpsF/GutQ family protein [Shewanella
           benthica KT99]
          Length = 325

 Score =  250 bits (639), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 206/324 (63%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q     I  E++ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NKLRQWGKNVIDIERKALDNLYQYVD---SAEFAAACKLIFECTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++T ASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+  ++   +R  +P
Sbjct: 62  KISATFASTGTPAFFVHPGEASHGDLGVLSENDIILAISNSGESSEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+TS+ KS +A HA++ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 IIAVTSKPKSTMAKHANVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++DF + HPGG LG  L +  SDVMH G  +PLVK    + DA+  +S K  G  AV D 
Sbjct: 182 KDDFALSHPGGTLGRKLLLKVSDVMHKGPDLPLVKQNICVTDALYEISNKGLGMTAVTDG 241

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R  +   +L   S+ DVM K    I E+ L   A++++ +++I+ L
Sbjct: 242 ANKLVGIFTDGDLRRVIDTQVNLRETSISDVMSKACITISEEILAAEALKVMDENDINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           ++VDD    IG ++ LD+++ G+I
Sbjct: 302 IIVDDNNTPIGALNMLDMVKAGVI 325


>gi|148546239|ref|YP_001266341.1| KpsF/GutQ family protein [Pseudomonas putida F1]
 gi|148510297|gb|ABQ77157.1| KpsF/GutQ family protein [Pseudomonas putida F1]
          Length = 324

 Score =  250 bits (638), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 142/321 (44%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E+ L   +   F  A E I   KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLE---LEAVEA-LLARIDDNFVKACELILTSKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGIKLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+GD +P V  G  L DA+  +S K  G   +V+   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVEPDGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DHEDRPTGALNMHDLLRAGVM 324


>gi|167561504|ref|ZP_02354420.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis EO147]
          Length = 327

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 188/311 (60%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+
Sbjct: 21  EANAVRALADQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A
Sbjct: 77  FFVHPAEASHGDLGMVTKDDVFVAISHSGESEELVAILPLIKRLGAKLIAMTGRPASSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E+CP  LAPT S    LA+GDAL +A+L++R F   DF   HPGG L
Sbjct: 137 TLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALTVAVLDARGFGSEDFARSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM +G  +P V +   L DA+  ++ KR G  AVVDE  ++ GI T+GD+
Sbjct: 197 GRRLLTYVRDVMRTGGEVPTVTLDSTLSDALFQITAKRMGMTAVVDEAGRVAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D   L + DVM +NP+ I  D L   A++L+ +H I+ ++VVD+    IG +
Sbjct: 257 RRVLERDGDFRRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQMLVVDEQGALIGAL 316

Query: 331 HFLDLLRFGII 341
           +  DL    +I
Sbjct: 317 NMHDLFSKKVI 327


>gi|78048669|ref|YP_364844.1| sugar phosphate isomerase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037099|emb|CAJ24844.1| sugar phosphate isomerase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 333

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/323 (42%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V    R +  E+  L+S+ + +  E    F  A   + A +GRVV TG+GKSGH+  K
Sbjct: 15  SLVASGQRVLQIEREALASVGARIGSE----FAAACRLVLASRGRVVATGMGKSGHVARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE++ +L   +R   P+
Sbjct: 71  IAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSGESDEVRMLLPVLKRQGNPI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 131 IAMTGRTGSTLAQAADVHLDVSVSAEACPLHLAPTSSTTASLAMGDALAVALLDARGFTA 190

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG  L +  +DVMH+G+ +P V+    L +A+  +S KR G  AVVD  
Sbjct: 191 DDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSEALMEMSRKRLGMTAVVDAD 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D L   A +L+  + I+ L+
Sbjct: 251 DRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIAADQLAAEAARLMEDYKINGLI 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   +A+G ++  DLLR  ++
Sbjct: 311 VVDAQHRAVGALNIHDLLRAKVV 333


>gi|114321374|ref|YP_743057.1| KpsF/GutQ family protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227768|gb|ABI57567.1| KpsF/GutQ family protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 341

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 192/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   +   F  A   + A +GRVV+TG+GKSGHI  K+A+TLASTGTP+FFVH  EASH
Sbjct: 41  TLTERVDATFVRACRHMLACRGRVVVTGMGKSGHIAGKIAATLASTGTPAFFVHPGEASH 100

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMITRDD+++ LS SG ++E+  IL   RR  +PLIA+T    S +A  AD  L + 
Sbjct: 101 GDLGMITRDDVVLALSNSGETNEITTILPLIRRLHVPLIALTGNPDSTLARAADDHLDVS 160

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SD 222
              E+CP GLAPT S    LA+GDALAIALLE+R F+ +DF   HPGG+LG   +    D
Sbjct: 161 VAQEACPLGLAPTASTTASLAMGDALAIALLEARGFTADDFARSHPGGRLGRRLLLLVED 220

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VMH+G  IP V    PL +A+  ++ K  G  A+VD   ++ G+ T+GD+ R   +  D+
Sbjct: 221 VMHTGTRIPRVGEDTPLAEALLEITRKGLGMTAIVDGDDRILGVFTDGDLRRCLDQGLDI 280

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L V +VM +  + +  D L   A++L+  H I+ L+V DD Q+ +G ++  DLLR G+
Sbjct: 281 HRLRVGEVMTRGGRTVRPDALAAEALELMESHRINALLVTDDGQRLLGALNMHDLLRAGV 340

Query: 341 I 341
           +
Sbjct: 341 V 341


>gi|146305910|ref|YP_001186375.1| KpsF/GutQ family protein [Pseudomonas mendocina ymp]
 gi|145574111|gb|ABP83643.1| KpsF/GutQ family protein [Pseudomonas mendocina ymp]
          Length = 324

 Score =  250 bits (638), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 133/293 (45%), Positives = 189/293 (64%), Gaps = 3/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A E I A KGRVV+ G+GKSGHIG+K+A+TLASTGT SFFVH AEASHGD+GMIT+
Sbjct: 32  NFIKACELILACKGRVVVVGMGKSGHIGNKIAATLASTGTTSFFVHPAEASHGDMGMITK 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++ LS SGS+ E+  +L   +R  I LI++T    S +A  A++ L      E+CP 
Sbjct: 92  DDIVLALSNSGSTAEIVTLLPLIKRLGIRLISMTGNPDSPLAKAAEVNLDARVSQEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPT+S    L +GDALAIALLE+R F+  DF   HPGG LG  L +   +VMH+GD++
Sbjct: 152 NLAPTSSTTASLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGDAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V  G  L DA+  +++K  G   V++   +L GI T+GD+ R   K  D+   S+++V
Sbjct: 212 PRVNRGTSLRDALLEMTQKGLGMTVVLEADGRLAGIFTDGDLRRTLDKGIDVRQASIDEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  + K    + L   A++++  H I+ L+VVDD  + +G ++  DLLR G++
Sbjct: 272 MTPHGKTARAEMLAAEALKIMEDHKINALVVVDDQDRPVGALNMHDLLRAGVM 324


>gi|261855369|ref|YP_003262652.1| KpsF/GutQ family protein [Halothiobacillus neapolitanus c2]
 gi|261835838|gb|ACX95605.1| KpsF/GutQ family protein [Halothiobacillus neapolitanus c2]
          Length = 323

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 186/302 (61%), Gaps = 5/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
            +L   L  QF  A E +    GRV++ G+GKSGHIG K+A+TLASTGTP+FFVH  EAS
Sbjct: 22  QALSARLDHQFITACELMLKCDGRVIVIGMGKSGHIGGKIAATLASTGTPAFFVHPGEAS 81

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMITR D+++ LS SG + E+ AIL   +R   PL+A+T   +S +A  A+  L +
Sbjct: 82  HGDLGMITRRDVVLALSNSGETAEMLAILPVIKRLGTPLVALTGRPQSTLAKAAEAHLDV 141

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    L +GDALA+ALL++R F   DF + HPGG LG  L +   
Sbjct: 142 SVEREACPLNLAPTASTTAALVMGDALAVALLDARAFQPEDFALSHPGGTLGRRLLLRVQ 201

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
           DVMH+GD IP V     +  A+ ++S    G   +VDE QKL G+ T+GD+ R   +   
Sbjct: 202 DVMHTGDRIPRVMHNQTIKQALIVISSGGLGMTTIVDEQQKLLGLFTDGDLRRILDQEEY 261

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           DLN   +E VMI+NP+    D L   A+ ++ +  I+ L+V D+    IG ++  DLLR 
Sbjct: 262 DLNQ-PIERVMIRNPRTCTADKLAAEALAIMERDKINGLIVTDNQSHVIGALNMHDLLRA 320

Query: 339 GI 340
           G+
Sbjct: 321 GV 322


>gi|292669893|ref|ZP_06603319.1| arabinose 5-phosphate isomerase [Selenomonas noxia ATCC 43541]
 gi|292648690|gb|EFF66662.1| arabinose 5-phosphate isomerase [Selenomonas noxia ATCC 43541]
          Length = 326

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 132/330 (40%), Positives = 202/330 (61%), Gaps = 10/330 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K++  + A+ ++  E + ++ L   +  +    F  AV  I   K R+V+TG+GKSGH
Sbjct: 1   MAKSTIREKAIETLELEAKAVAQLTERIDDD----FEAAVRAILDCKARIVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T +D++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTENDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+    KS +   AD  + +  E E+CP GLAPT+S    LA+GDA+A+AL+E+R
Sbjct: 117 GARIIAMCGRRKSQLGRSADFYIDIGVEREACPLGLAPTSSTTATLAMGDAIAMALMEAR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG  L +  ++VMH+G+  P+V       DA+ ++++K  G  +V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGEENPVVSYNTTAKDALFVMTDKGLGAASV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD N L   VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDANGKFIGLVTDGIIRRALAKDYNFLDKDVESIMFATPLTITPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL VVD+    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVVDETGIPVGIVHLTDLLRQGVV 326


>gi|29654084|ref|NP_819776.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 493]
 gi|161830008|ref|YP_001596939.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 331]
 gi|29541350|gb|AAO90290.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 493]
 gi|161761875|gb|ABX77517.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 331]
          Length = 324

 Score =  249 bits (637), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 129/300 (43%), Positives = 193/300 (64%), Gaps = 3/300 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   +  +F  A   +   KGRVV+ G+GKSGHI  K+A+TLASTGTPSF+VH +EASH
Sbjct: 24  SLHARIDEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLASTGTPSFYVHPSEASH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +S +A  AD V+ + 
Sbjct: 84  GDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQSTLARIADTVIDVS 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP GLAPT+S    L +GDALAIALLE+R F+ +DF  +HPGG LG  L +  +D
Sbjct: 144 VEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTADDFARIHPGGSLGRRLLLHIAD 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T+GD+ R   K  D+
Sbjct: 204 LMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFTDGDLRRTLDKGYDI 263

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   +E VM KN   +    L   A+++++Q+ I+ L+VVD     +G++H  DLLR G+
Sbjct: 264 HRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASPVGVIHMHDLLRAGV 323


>gi|269215216|ref|ZP_05987955.2| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
 gi|269208038|gb|EEZ74493.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
          Length = 351

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +    GRVVITG+GKSGH+G K+A+T+ASTGTP+
Sbjct: 45  EAEGLREIAA----DLDENFARAADALLRCTGRVVITGMGKSGHVGRKIAATMASTGTPA 100

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +A
Sbjct: 101 FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPGSTMA 160

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 161 RYADIHITASVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 220

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 221 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDAQGRLKGVFTDGDL 280

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +   L  L VE++M   PK I  + L   A+++++ ++I+ L+V D     IG +
Sbjct: 281 RRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKVMQANHINGLLVTDADGVLIGAL 340

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 341 NMHDLLAARIV 351


>gi|114797510|ref|YP_759746.1| KpsF/GutQ family sugar isomerase [Hyphomonas neptunium ATCC 15444]
 gi|114737684|gb|ABI75809.1| sugar isomerase, KpsF/GutQ family [Hyphomonas neptunium ATCC 15444]
          Length = 342

 Score =  249 bits (637), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 186/325 (57%), Gaps = 5/325 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   S +  A   I  E+  L  LE +L   L      AV  I A    V++ G+GKSGH
Sbjct: 22  LTSQSDLDLARNVIRTERNALEKLEQTLGPSL----EEAVSTILATDRHVIVAGVGKSGH 77

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A++LASTGTPSFF+H  EASHGDLGMI    ++I +S+SG S EL  +L Y +  
Sbjct: 78  IGQKIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSN 137

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IPLIA+T   +S +  +AD++L LP  PE+CP+GLAPT+S  M LA+GDAL I L+  R
Sbjct: 138 AIPLIAMTRARESTLGRYADVLLELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARR 197

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHS-GDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            FS  DF   HPGGKLG     A D +    D +PL   G    + +  +SE R GCV +
Sbjct: 198 GFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASFEELVIAVSEGRKGCVGI 257

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +DE +KL G++T+GD+ R         S  +VM   P+ I  D  +   ++   ++ IS 
Sbjct: 258 IDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPDARMMSVIKSFSENRISN 317

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+     G++   DLL  G +
Sbjct: 318 AFVVDETGAPAGLIDMKDLLAEGYV 342


>gi|309378636|emb|CBX22707.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 324

 Score =  249 bits (636), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +    GRVVITG+GKSGH+G K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----DLDENFARAADALLHCTGRVVITGMGKSGHVGRKIAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLVCITARPGSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RYADIHITASVSQEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDAQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +   L  L VE++M   PK I  + L   A+++++ ++I+ L+V D     IG +
Sbjct: 254 RRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKVMQANHINGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|171056873|ref|YP_001789222.1| KpsF/GutQ family protein [Leptothrix cholodnii SP-6]
 gi|170774318|gb|ACB32457.1| KpsF/GutQ family protein [Leptothrix cholodnii SP-6]
          Length = 330

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 131/300 (43%), Positives = 181/300 (60%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           LQ +    F   V+ + A +GRVV+ G+GKSGH+G K+A+TLASTGTP+ FVH  EASHG
Sbjct: 31  LQPQQGASFAETVQAMLACQGRVVVMGMGKSGHVGRKIAATLASTGTPAMFVHPGEASHG 90

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TR D+++ +S SG SDEL AIL   +R  + L+A+T   +S +A HAD+VL+   
Sbjct: 91  DLGMVTRGDVVLAISNSGESDELAAILPALKRLGVTLVAMTGRAESTLASHADLVLSNRV 150

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L     D+
Sbjct: 151 TQEACPLNLAPTASTTAQLALGDALAVALLDARGFRAEDFARSHPGGSLGRKLLTHVRDI 210

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M SGD++P V+     +D +  +S K  G  AVVDE  +  GI T+GD+ R      DL 
Sbjct: 211 MRSGDAVPRVRPDTGFLDVMREMSAKGLGTTAVVDEDGRAIGIFTDGDLRRAIEAGIDLR 270

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
                 VM    + + ED L   A  L+ +  ++ L+V D     +G ++  DL+R  +I
Sbjct: 271 ERDARGVMHAGARTVREDALAVEAAGLMEEARVTTLLVSDAQGLLVGAINTNDLMRAKVI 330


>gi|254480035|ref|ZP_05093283.1| sugar isomerase, KpsF/GutQ family [marine gamma proteobacterium
           HTCC2148]
 gi|214039597|gb|EEB80256.1| sugar isomerase, KpsF/GutQ family [marine gamma proteobacterium
           HTCC2148]
          Length = 308

 Score =  249 bits (636), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 134/301 (44%), Positives = 181/301 (60%), Gaps = 3/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G +   F  A + + A +GRV++TG+GKSGHIG K+A+TLASTGTP+FFVH  EAS
Sbjct: 7   SALTGRIGADFERACQLLLACRGRVIVTGMGKSGHIGCKIAATLASTGTPAFFVHPGEAS 66

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGD+GMITR+D II LS SG   E+  +L   +R   P+IA+T    S +A  AD  L  
Sbjct: 67  HGDMGMITREDAIIALSNSGEVAEVVTLLPLLKRLGSPVIALTGNPHSTLALAADAHLNT 126

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT+S    L +GDALAIALLE R F+  DF   HPGG LG  L +   
Sbjct: 127 GVETEACPLDLAPTSSTTTALVMGDALAIALLEQRGFTAEDFAFSHPGGTLGKKLLLKVQ 186

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           DVM +GDS+P V    PL  A+  +S K  G   V +   +L GI T+GD+ R   +  D
Sbjct: 187 DVMQTGDSVPSVDAATPLSQALLEISNKGLGMTTVTNADGRLAGIFTDGDLRRTLDQQID 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +N   +  +M    K      L   A++++ +H I+ L+V+DD  +  GI+H + LL  G
Sbjct: 247 INNTPIASLMSTGTKTANPQMLAAEALRIMEEHEITSLVVLDDSGETRGIIHLMHLLHAG 306

Query: 340 I 340
           I
Sbjct: 307 I 307


>gi|313667758|ref|YP_004048042.1| sugar isomerase, kpsf/gutq family [Neisseria lactamica ST-640]
 gi|313005220|emb|CBN86653.1| sugar isomerase, kpsf/gutq family [Neisseria lactamica 020-06]
          Length = 324

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 199/311 (63%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL  + +    +L   F  A + +    GRVVITG+GKSGH+G K+A+T+ASTGTP+
Sbjct: 18  EAEGLREIAA----DLDENFARAADALLHCTGRVVITGMGKSGHVGRKIAATMASTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L+ IT+   S +A
Sbjct: 74  FFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIIPALKRKNITLVCITARPGSTMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +DF + HP G L
Sbjct: 134 RYADIHITASVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDDFALSHPAGSL 193

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D   +LKG+ T+GD+
Sbjct: 194 GKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDAQGRLKGVFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F +   L  L VE++M   PK I  + L   A+++++ ++I+ L+V D     IG +
Sbjct: 254 RRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKVMQANHINGLLVTDADGVLIGAL 313

Query: 331 HFLDLLRFGII 341
           +  DLL   I+
Sbjct: 314 NMHDLLAARIV 324


>gi|113969022|ref|YP_732815.1| KpsF/GutQ family protein [Shewanella sp. MR-4]
 gi|113883706|gb|ABI37758.1| KpsF/GutQ family protein [Shewanella sp. MR-4]
          Length = 325

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 206/320 (64%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAIPVIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+  DF
Sbjct: 126 TGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGFTREDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  S+VMHSGD +PLVK    + DA+  +S+K  G  AV+DE  KL
Sbjct: 186 AMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAVIDEQNKL 245

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R  +   +L T  + DVM +N   I E+ L   A+Q++   NI+ L+V+D
Sbjct: 246 VGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNINGLIVID 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G ++ LD+++ G+I
Sbjct: 306 KDNHPVGALNMLDMVKAGVI 325


>gi|293394220|ref|ZP_06638520.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291423198|gb|EFE96427.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 328

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/311 (44%), Positives = 196/311 (63%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I A  G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 23  ERDGLAQLDRYINDD----FTRACEAIAACGGKVVVMGMGKSGHIGCKIAATFASTGTPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T  D+++ +S SG S+E++A++   +R  IPLI +T+   S + 
Sbjct: 79  FFVHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQRIPLICMTNNPDSSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MHSG+ IP V     L DA+  ++ K  G   V ++  K+ GI T+GD+
Sbjct: 199 GRRLLLRVTDIMHSGEEIPHVSADASLRDALLEITRKNLGMTVVCNDLMKIAGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +  +TL   A+ L++Q +I+ L+V D  Q  +G+V
Sbjct: 259 RRVFDMGIDLNHARIADVMTLGGVRVRPNTLAVDALNLMQQRHITALLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|91790720|ref|YP_551672.1| KpsF/GutQ family protein [Polaromonas sp. JS666]
 gi|91699945|gb|ABE46774.1| KpsF/GutQ family protein [Polaromonas sp. JS666]
          Length = 335

 Score =  249 bits (635), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 138/300 (46%), Positives = 187/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L G +  +F  AVE +   +GRVV+ G+GKSGHIG K+A+TLASTGTP+ FVH AEASHG
Sbjct: 36  LAGRVGPEFARAVELMLTCRGRVVVMGMGKSGHIGRKIAATLASTGTPAMFVHPAEASHG 95

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMIT  D+++ +S SG S+EL +IL    R  +PL+AIT   +S +A  A + L    
Sbjct: 96  DLGMITGLDVVLAISNSGESEELTSILPVLSRQGVPLVAITGGLQSALAKQARVTLDSSV 155

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT S   QLA+GDALA+ALL++R F E DF   HPGG LG  L    SDV
Sbjct: 156 AQEACPLNLAPTASTTAQLALGDALAVALLDARGFREEDFARSHPGGALGRKLLTHVSDV 215

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M SGD++P V       + +  +S K  G  AVVD  Q++ GI T+GD+ R   K  DL 
Sbjct: 216 MRSGDAVPKVGPDTSFTELMREMSAKGLGASAVVDAQQRVLGIFTDGDLRRLVEKGVDLR 275

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +    DVM  +P+ +  D L   A++L+ Q +I+ ++VVDD     G ++  DL+R  +I
Sbjct: 276 SSRAGDVMHAHPRTVRPDALAVEAVELMEQFSITSVLVVDDAGVLCGALNTNDLMRAKVI 335


>gi|146313267|ref|YP_001178341.1| D-arabinose 5-phosphate isomerase [Enterobacter sp. 638]
 gi|145320143|gb|ABP62290.1| KpsF/GutQ family protein [Enterobacter sp. 638]
          Length = 328

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  + S     A EKI +  G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAQLDQYINQDFSL----ACEKIFSCAGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +TS  +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDIVIALSNSGESNEILALIPVLKRLHVPLICMTSRPESTMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+G  IP V    PL DA+  ++ K  G   + D+   ++GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGAEIPRVSKDAPLRDALLEITRKNLGMTVICDDQMNIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D  Q  +G+V
Sbjct: 259 RRVFDMGVDVRTLGIADVMTPGGIRVRPATLAVEVLNLMQSRHITAVMVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|114769298|ref|ZP_01446924.1| KpsF/GutQ family protein [alpha proteobacterium HTCC2255]
 gi|114550215|gb|EAU53096.1| KpsF/GutQ family protein [alpha proteobacterium HTCC2255]
          Length = 329

 Score =  249 bits (635), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 129/297 (43%), Positives = 189/297 (63%), Gaps = 9/297 (3%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   AV  I    GR+VI+G+GKSG IG KL +T ASTGTPS F+H AEASHGDLGM+ +
Sbjct: 33  QVEAAVNVICTTSGRLVISGMGKSGIIGKKLVATFASTGTPSLFLHPAEASHGDLGMLCK 92

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++++S+SG S EL  I+ Y++RF +P+IA T+   S +   ADI+L LPK  ESCPH
Sbjct: 93  DDVLLLMSFSGESRELIDIIRYSKRFDVPIIAFTANANSTLGKAADILLQLPKVKESCPH 152

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            LAPT+S ++QLA+GDALAI LL+ + FSE DF+  HPGGKLG   +   D+MH+ D +P
Sbjct: 153 NLAPTSSTLIQLALGDALAITLLKEKGFSEEDFFNFHPGGKLGAALMPIKDLMHTDDKLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--------TL 283
           L+    P  D + I+S K +G V + ++  ++ G+IT+GD+ R   K+ +          
Sbjct: 213 LISQDAPFSDILNIISSKGYGIVGLKNDIGEMSGVITDGDVRRYITKNTDGSMKEVMFGT 272

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           S +++M K      E+      + +L Q NIS   V+ +  K +G++  L L++ G+
Sbjct: 273 SGKEIMTKCFVSFEENQSCAKILSVLEQKNISSAFVLKN-GKPLGLISMLMLIQAGV 328


>gi|117919129|ref|YP_868321.1| KpsF/GutQ family protein [Shewanella sp. ANA-3]
 gi|117611461|gb|ABK46915.1| KpsF/GutQ family protein [Shewanella sp. ANA-3]
          Length = 325

 Score =  248 bits (634), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 206/320 (64%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAIPVIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+  DF
Sbjct: 126 TGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGFTREDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  S+VMHSGD +PLVK    + DA+  +S+K  G  AV+DE  KL
Sbjct: 186 AMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAVIDEQNKL 245

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R  +   +L T  + DVM +N   I E+ L   A+Q++   NI+ L+V+D
Sbjct: 246 VGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNINGLIVID 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G ++ LD+++ G+I
Sbjct: 306 KEHHPVGALNMLDMVKAGVI 325


>gi|71065482|ref|YP_264209.1| sugar isomerase [Psychrobacter arcticus 273-4]
 gi|71038467|gb|AAZ18775.1| probable sugar isomerase [Psychrobacter arcticus 273-4]
          Length = 330

 Score =  248 bits (634), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 204/321 (63%), Gaps = 9/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A+ +I  EK  L+ L      ++  +F  A + I A +GRVV+TG+GKSG IG K+A
Sbjct: 14  ISTAIDAINTEKAALALLTE----QIDDRFAQACDIILACQGRVVVTGMGKSGLIGRKIA 69

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+FF+H  EA HGDLGM+ + D+++ +S SG SDE+K +L   +R +IPLI+
Sbjct: 70  ATFASTGTPAFFMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKMLLPVVKRLNIPLIS 129

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           I+ + + ++   ADI+LTL K  E+CP  LAPT+S    LA+GDALA+AL+ +RNF+  D
Sbjct: 130 ISRDKRGMLPHAADIILTLGKSQEACPLNLAPTSSTTATLALGDALAVALVHARNFTSED 189

Query: 204 FYVLHPGGKLG-TLFVCASDVMHS-GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           F + HP G LG  L     D+MH+  + +PL+    PL +A+ I+S  R G   V D+  
Sbjct: 190 FALSHPAGALGRQLLTRVEDLMHTKSEDLPLINQQAPLQEALFIMSAGRLGMTVVTDDKS 249

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           K+ GI T+GD+ R   K  DL T  + ++M+ NP+ I +    + A+ ++ ++ IS L++
Sbjct: 250 KVVGIFTDGDLRRGLEKGIDLQT-PMRELMVSNPRRINKSMRASDALSVMNENAISQLLI 308

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD Q+   I+   DLL+ G+
Sbjct: 309 VDDEQRLEAIITVHDLLQAGV 329


>gi|24375443|ref|NP_719486.1| carbohydrate isomerase KpsF/GutQ family protein [Shewanella
           oneidensis MR-1]
 gi|24350291|gb|AAN56930.1|AE015827_2 carbohydrate isomerase, KpsF/GutQ family [Shewanella oneidensis
           MR-1]
          Length = 325

 Score =  248 bits (634), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 133/306 (43%), Positives = 203/306 (66%), Gaps = 3/306 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           S+L++  Q   S +F  A E I    G+V++ G+GKSGHIG+K+++TLASTGTP+FFVH 
Sbjct: 20  SALDNLYQYVDSAEFAQACELILNCSGKVIVMGMGKSGHIGNKISATLASTGTPAFFVHP 79

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+T + +S +A  A I
Sbjct: 80  GEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAIPVIAMTGKPESTMARLAKI 139

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLF 217
            L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+ +DF + HPGG LG  L 
Sbjct: 140 HLCIEVPEEACPLGLAPTSSTTATLVMGDAMAIALLQAKGFTRDDFAMSHPGGALGRKLL 199

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--N 275
           +  S+VMH GD +PLVK    + DA+  +S+K  G  A++DE  KL GI T+GD+ R  +
Sbjct: 200 LKVSNVMHCGDDLPLVKHDICITDALYEISKKGLGMTAIIDEQNKLVGIFTDGDLRRVID 259

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +L T  + DVM +N   I E+ L   A+Q++   NI+ L+V+D     +G ++ LD+
Sbjct: 260 AQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSRNINGLIVIDKENHPVGALNMLDM 319

Query: 336 LRFGII 341
           ++ G+I
Sbjct: 320 VKAGVI 325


>gi|121607157|ref|YP_994964.1| KpsF/GutQ family protein [Verminephrobacter eiseniae EF01-2]
 gi|121551797|gb|ABM55946.1| KpsF/GutQ family protein [Verminephrobacter eiseniae EF01-2]
          Length = 333

 Score =  248 bits (633), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 142/324 (43%), Positives = 191/324 (58%), Gaps = 11/324 (3%)

Query: 25  QCALRSIIA----EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           Q ALR   A    E   L+ L + + G     F  AV+ +   +GR+V+ G+GKSGH+G 
Sbjct: 14  QQALRMARATFDIEAAALTGLAARVDG----VFAQAVQLVLRTRGRMVVMGMGKSGHVGR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DDL++ LS SG S EL AIL   RR   P
Sbjct: 70  KIAATLASTGTPAFFVHPAEASHGDLGMVTGDDLVLALSNSGESAELTAILPVLRRLGTP 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T   +S +A HA++VL    + E+CP  LAPT S   QLA+GDALA+ALL++R F 
Sbjct: 130 LIALTGGLQSTLARHAELVLDCSVQREACPLNLAPTASTTAQLAMGDALAVALLDARGFR 189

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L    SDVM  G  I  V         +  +S K  G  A+VD 
Sbjct: 190 TEDFARSHPGGALGRKLLTHVSDVMRRGPEIARVPPEASFSALMREMSAKGLGASAIVDA 249

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R      +L + +   VM  NP+ I  D L   A +++  H I+ +
Sbjct: 250 AGQVLGIFTDGDLRRRIEAGAELRSATAAQVMQTNPRCIAPDALAVDAAEMMETHAITSV 309

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D   +  G+VH  DL+R  +I
Sbjct: 310 LVIDSAGRLTGVVHIGDLMRAKVI 333


>gi|221126303|ref|XP_002165354.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260221784|emb|CBA30693.1| Arabinose 5-phosphate isomerase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 333

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 181/300 (60%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  L   F   VE++  I GRVV+ G+GKSGH+G K+A+TLASTGTP+ FVH AEASHG
Sbjct: 34  LKSRLGEGFVRTVERVLTISGRVVVMGMGKSGHVGRKIAATLASTGTPAMFVHPAEASHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T  DL++++S SG S E+ AIL   +R  +PL+A+T   +S +A HAD  +    
Sbjct: 94  DLGMVTDADLVLMISNSGESQEVAAILPVLKRLGVPLVAMTGNARSTMAQHADFWIDTAV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L    SDV
Sbjct: 154 SKEACPLNLAPTASTTAQLAMGDALAVALLDARGFRAEDFARSHPGGALGRKLLTHVSDV 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M SGD+IP V       + +  +S K  G  AVV E + L GI T+GD+ R   +  DL 
Sbjct: 214 MRSGDAIPRVWPTATFSELMREMSAKGLGATAVVTEDETLMGIFTDGDLRRLVEQGTDLR 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +  DVM  NP  I    L   A  L+    I+ ++VVDD  +  G ++  DL+R  +I
Sbjct: 274 AKTAMDVMHANPCTIPAHALAVDAADLMEARRITSVLVVDDAGRLCGAINSNDLMRAKVI 333


>gi|254462246|ref|ZP_05075662.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678835|gb|EDZ43322.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 320

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 124/296 (41%), Positives = 183/296 (61%), Gaps = 1/296 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  E+   F  AV+ I    GR+++ G+GKSGH+  K+A+T ASTGTP+ FVH AEASHG
Sbjct: 25  LANEVGTPFGQAVQMILDAPGRIIVCGMGKSGHVARKIAATFASTGTPAHFVHPAEASHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+ + D+ +VLS SG + EL  ++ + RRF IP+I + S+  S +   +D+ + LP 
Sbjct: 85  DLGMMAKGDVALVLSNSGETPELADVIAHTRRFGIPMIGVASKATSTLLTQSDVAIVLPA 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+C  G+ PTTS  M LA+GDA+A+AL+E R+F+  +F   HPGGKLG       D+M
Sbjct: 145 AEEACGTGVVPTTSTTMTLALGDAMAVALMEHRDFTPANFRDFHPGGKLGARLSKVGDLM 204

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H+GD++PLV     + + +  +S+K FG V VVD  ++L+GIIT+GD+ R+    L+ LS
Sbjct: 205 HAGDALPLVAPNTSMGNVLLEISQKGFGVVGVVDTARQLQGIITDGDLRRHMDGLLD-LS 263

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             DV   +P  +    L   A+ ++    I+ L V D      G++H  D LR G+
Sbjct: 264 AGDVQTNDPTTVQAGALAEEALGIMNTRKITCLFVTDQSGSVEGLLHIHDCLRAGL 319


>gi|104780314|ref|YP_606812.1| hypothetical protein PSEEN1098 [Pseudomonas entomophila L48]
 gi|95109301|emb|CAK13998.1| conserved hypothetical protein; KpsF/GutQ family [Pseudomonas
           entomophila L48]
          Length = 324

 Score =  248 bits (633), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 199/321 (61%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R++  E   +  L + + G     F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IHSAQRTLRLELEAVEGLLARIDG----NFVKACELILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTPSFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGIQMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSG+ +P V+ G  L DA+  +S K  G   V++   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGEELPKVQRGTLLKDALLEMSRKGLGMTVVLESDGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R+  +  D++   +++VM  + K    + L   A++++  H IS L+VV
Sbjct: 244 LAGVFTDGDLRRSLDRSIDIHKTLIDEVMTVHGKTARAEMLAAEALKIMEDHKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DRDDRPTGALNMHDLLRAGVM 324


>gi|85710298|ref|ZP_01041363.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Erythrobacter sp. NAP1]
 gi|85689008|gb|EAQ29012.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Erythrobacter sp. NAP1]
          Length = 328

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 192/318 (60%), Gaps = 1/318 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           V  AL+++  E  GL  L+ +L    L   F  AV+   + KGR+++TGIGKSGHI  K+
Sbjct: 10  VSSALKTLDIEIGGLKDLKRALSDSGLGNAFERAVDAFNSNKGRIIVTGIGKSGHIARKI 69

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T  STGT + ++H  EASHGDLG I+RDD++  ++WSG++ EL  I+ +    +  L+
Sbjct: 70  AATFVSTGTSALYLHPGEASHGDLGTISRDDVVFAITWSGTTQELSDIVNFCGINNQQLV 129

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T+  +S +   ADI LTLP   E+CP+ LAPT+S  MQ+ +GDALA+AL+E+R FS  
Sbjct: 130 VATAHPQSWIGKAADICLTLPMVREACPNELAPTSSTTMQMVLGDALAVALIEARGFSPQ 189

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F +LHPGG LG        VM +G+++P+V +   L  A   +S KR+GC A+VD+  +
Sbjct: 190 NFGILHPGGLLGARLTTLEKVMATGEALPMVSLDATLRGATIEMSRKRYGCTAIVDQDNR 249

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           L G  T+GD+ R+   +    ++   M  NP       +   A+ L+    +SVL V + 
Sbjct: 250 LVGAFTDGDLRRSIAANDLDDNIASHMSPNPVTASPKMMAVDALALMNDSAVSVLFVTEQ 309

Query: 323 CQKAIGIVHFLDLLRFGI 340
             + +GIVH  DL+R GI
Sbjct: 310 EDRLVGIVHMHDLVRLGI 327


>gi|39996991|ref|NP_952942.1| carbohydrate isomerase KpsF/GutQ family protein [Geobacter
           sulfurreducens PCA]
 gi|39983879|gb|AAR35269.1| carbohydrate isomerase, KpsF/GutQ family [Geobacter sulfurreducens
           PCA]
 gi|298506008|gb|ADI84731.1| arabinose-5-phosphate isomerase [Geobacter sulfurreducens KN400]
          Length = 321

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 195/322 (60%), Gaps = 9/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A + I  E   L+ L  ++ GE    F  AV  I   +GRVV+TG+GKSG IG K+A
Sbjct: 3   LEEARKVIRIEAEALTRLADTIDGE----FEKAVRLILGTRGRVVVTGMGKSGLIGQKIA 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST+ASTGTP+ F+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    L++
Sbjct: 59  STMASTGTPALFLHPAEGVHGDLGMIMKGDVVIAISNSGETEEVVRILPIIKRLGATLVS 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++    S +A   D+ L +    E+CP GLAPT S    LA+GDALA+ALL  R F   D
Sbjct: 119 MSGNPSSTLAKAGDVFLDISVTEEACPLGLAPTASTTATLAMGDALAVALLIERGFRPED 178

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   D+MHSGD++PLV    P+ DA+ +++ K  G   V  E   
Sbjct: 179 FALFHPGGSLGKKLLLTVGDLMHSGDAVPLVGSATPIRDALFVITAKGLGITGVCAEDGA 238

Query: 263 LKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T+GD+ R+  K ++ L+    ++M +NPK I    L   A+Q++  H+I+ L V 
Sbjct: 239 LVGVVTDGDLRRSLGKGVDILNQPAGEIMTRNPKRINRSELAAKALQVMESHSITSLFVF 298

Query: 321 DDC--QKAIGIVHFLDLLRFGI 340
           DD    + +G++H  DLLR G+
Sbjct: 299 DDTADNRPVGVIHLHDLLRAGL 320


>gi|52841076|ref|YP_094875.1| polysialic acid capsule expression protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54293815|ref|YP_126230.1| hypothetical protein lpl0871 [Legionella pneumophila str. Lens]
 gi|54296861|ref|YP_123230.1| hypothetical protein lpp0902 [Legionella pneumophila str. Paris]
 gi|148360514|ref|YP_001251721.1| polysialic acid capsule expression protein [Legionella pneumophila
           str. Corby]
 gi|296106419|ref|YP_003618119.1| polysialic acid capsule expression protein [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628187|gb|AAU26928.1| polysialic acid capsule expression protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53750646|emb|CAH12053.1| hypothetical protein lpp0902 [Legionella pneumophila str. Paris]
 gi|53753647|emb|CAH15105.1| hypothetical protein lpl0871 [Legionella pneumophila str. Lens]
 gi|148282287|gb|ABQ56375.1| polysialic acid capsule expression protein [Legionella pneumophila
           str. Corby]
 gi|295648320|gb|ADG24167.1| polysialic acid capsule expression protein [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609632|emb|CBW99136.1| hypothetical protein LPW_09211 [Legionella pneumophila 130b]
          Length = 320

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 203/313 (64%), Gaps = 9/313 (2%)

Query: 37  GLSSLESSLQG--ELSFQ----FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           GL+ +E+  Q   EL+ +    F  A E + + KGR+V+TG+GKSGHI +KLAST +STG
Sbjct: 7   GLAVIETEAQAVFELTQRIDEHFEKACELLLSCKGRIVVTGMGKSGHIANKLASTFSSTG 66

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           +P+FF+H  EASHGDLGMITR D+++ +S SG++ E+  +L   +R  +PLI +T   +S
Sbjct: 67  SPAFFMHPGEASHGDLGMITRQDIVVAISNSGNTHEIVTLLPLLKRLEVPLITLTGNKQS 126

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD+ L +  + E+CP GLAPTTS  + L +GDALAI+LL++R FS  DF + HPG
Sbjct: 127 TLAKSADVNLDVSIKQEACPLGLAPTTSTTVSLVMGDALAISLLQARGFSAEDFALSHPG 186

Query: 211 GKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG  L +   D+ H+G+ +PL      + DA+  ++ K+ G   VVD    L G+ T+
Sbjct: 187 GALGKKLLLKIDDLCHTGEQLPLANENATVSDALIEVTNKKLGMTCVVDNHGYLVGVYTD 246

Query: 270 GDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GDI R   +  ++NT  ++DVM KN + I +  L   A+ ++++++I+ L+VV++  +  
Sbjct: 247 GDIRRTLTRQFNINTTLIKDVMTKNCRTISKGMLAAEALAIMQKYSITSLVVVENDNRPY 306

Query: 328 GIVHFLDLLRFGI 340
            ++H  DLL+ G+
Sbjct: 307 AVLHLHDLLKAGV 319


>gi|113461061|ref|YP_719129.1| polysialic acid capsule expression protein, KpsF/GutQ family
           protein [Haemophilus somnus 129PT]
 gi|112823104|gb|ABI25193.1| polysialic acid capsule expression protein, KpsF/GutQ family
           protein [Haemophilus somnus 129PT]
          Length = 321

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 138/318 (43%), Positives = 197/318 (61%), Gaps = 11/318 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +Q A  S+ AE+  L+ L  +L      QF+  VE I   +GR+V+ GIGKSG I
Sbjct: 9   MTMNYLQIARNSLAAEQNALAKLSQNLNQ----QFNQVVELILNCEGRLVVGGIGKSGLI 64

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  ++   + F 
Sbjct: 65  GKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKLIPSLKNFG 124

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T    S +A HAD +L +  E E+CP+ LAPTTSA++ LA+GDALA++L+ +RN
Sbjct: 125 NKIIALTGNLNSTLAKHADYILDISVEREACPNNLAPTTSALVTLALGDALAVSLITARN 184

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG   +C   D M     +P V       D +T+++E R G VA+V
Sbjct: 185 FQPADFAKFHPGGSLGRRLLCRVKDQMQV--RLPKVTENTNFTDCLTVMNEGRMG-VALV 241

Query: 258 DEGQKLKGIITEGDIFRNFHKD-LNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E + LKGIIT+GDI R    +  NTL  + +D+M  NPK I  +T L+ A   +++  I
Sbjct: 242 MENENLKGIITDGDIRRALSANGTNTLNKTAKDLMTSNPKTINYNTYLSEAENFMKEKKI 301

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L+VVDD  K IG+V F
Sbjct: 302 HSLVVVDDQNKVIGLVEF 319


>gi|187927375|ref|YP_001897862.1| KpsF/GutQ family protein [Ralstonia pickettii 12J]
 gi|309779924|ref|ZP_07674678.1| KpsF/GutQ [Ralstonia sp. 5_7_47FAA]
 gi|187724265|gb|ACD25430.1| KpsF/GutQ family protein [Ralstonia pickettii 12J]
 gi|308921283|gb|EFP66926.1| KpsF/GutQ [Ralstonia sp. 5_7_47FAA]
          Length = 327

 Score =  248 bits (632), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 134/300 (44%), Positives = 182/300 (60%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++S  F  AVE +    GRVV++G+GKSGH+  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 28  LKTQVSADFARAVEMVLGCTGRVVVSGMGKSGHVARKIAATLASTGTPAFFVHPAEASHG 87

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+TRDD+ I  S SG   EL  IL   +R    LIA+T    S +  HAD+VL    
Sbjct: 88  DLGMVTRDDVFIGFSNSGEVSELNVILPLVKRMGAKLIAVTGNPGSSLGKHADVVLNSHV 147

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP  LAPT S   Q+A+GDALA+A+L++R F   DF   HPGG LG  L     DV
Sbjct: 148 DVEACPLNLAPTASTTAQIALGDALAVAVLDARGFGAEDFARSHPGGSLGRKLLTHVRDV 207

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M +GD+IP V    PL  A+  ++ K     AVVD      G+ T+GD+ R     +D  
Sbjct: 208 MRAGDAIPRVDQDTPLSQALMEITRKGMAMTAVVDAQGHAVGVFTDGDLRRLLETPRDWR 267

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T+ + +VM +NP+ I  D L   A++++  H I+ L+VVD     +G +H  DL R  +I
Sbjct: 268 TVPINEVMHRNPRSIGPDQLAVEAVEVMETHRINQLLVVDAAGLLVGALHIHDLTRAKVI 327


>gi|119477364|ref|ZP_01617555.1| hypothetical protein GP2143_00282 [marine gamma proteobacterium
           HTCC2143]
 gi|119449290|gb|EAW30529.1| hypothetical protein GP2143_00282 [marine gamma proteobacterium
           HTCC2143]
          Length = 325

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 7/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K S    ALR+I  E+  ++ L   +       F  A E I A  GRVV+TG+GKSGHIG
Sbjct: 5   KLSLKDSALRTITMERDAITELLDRIDA----NFEHACELILACSGRVVVTGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+ FVH  EASHGDLGMIT DD++I LS SG++ E+  IL   +R   
Sbjct: 61  TKIAATLASTGTPAMFVHPGEASHGDLGMITPDDVVIALSNSGNTTEVLTILPLLKRMGT 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI++T    S ++  AD  + +    E+C   LAPT+S    L +GDALAI+L+E++ F
Sbjct: 121 PLISMTGNPASTLSSAADANIDVTVSQEACSLDLAPTSSTTATLVMGDALAISLMEAKGF 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S  DF   HPGG LG  L +   DVMHSG  +P+V +G  L +A+  ++ K  G   +VD
Sbjct: 181 SAEDFAFSHPGGALGRRLLLKVEDVMHSGPLLPVVFVGTKLSEALMEITRKGLGMTTIVD 240

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L G+ T+GD+ R   +  D++  ++ D+M ++ K +  D L   A+ ++    IS 
Sbjct: 241 NNNTLVGVFTDGDLRRALDQNIDIHQTAISDIMTRDCKTVNADMLAAEALGIMDHGKISA 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L VVD+  K +G VH  DLL  G+
Sbjct: 301 LAVVDEANKPVGAVHLHDLLNAGV 324


>gi|284049013|ref|YP_003399352.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
 gi|283953234|gb|ADB48037.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
          Length = 321

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 193/296 (65%), Gaps = 6/296 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A++ I   +GR+++TG+GKSG IG K+A+TLASTGTP+FF+H AE  HGDLGM+T 
Sbjct: 26  HFGEALKMILHCRGRIIVTGMGKSGIIGRKIAATLASTGTPAFFLHPAEGIHGDLGMVTE 85

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ LS SG + E+  IL   RR    +IA+    +S +A +ADIVL +  + E+CP 
Sbjct: 86  HDVVLALSNSGETGEVLNILPSIRRIGARIIAMVGNPESTLAKNADIVLNVGVKREACPL 145

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    LA GDALA+ LL +R+F+  +F + HPGG LG  L +   DVMH GD  
Sbjct: 146 GLAPTSSTTAALAFGDALAMELLSARHFTPEEFAIFHPGGSLGRKLLLTVDDVMHKGDEN 205

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDV 288
           P+V     + DA+ I+++K  G V+VVDE Q L+G++T+GDI R   +DL+ L+  V  +
Sbjct: 206 PVVHADISVKDALFIITDKGVGAVSVVDEDQHLQGLLTDGDIRRGIARDLDCLNRPVSQM 265

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M KNPK I +  L   A+ L+  +    I+VL VVD  +K +G++H  DL+  G++
Sbjct: 266 MTKNPKTIQDHKLAAEALHLMESNKPRPITVLPVVDKDRKVVGLLHITDLVHQGVV 321


>gi|170723419|ref|YP_001751107.1| KpsF/GutQ family protein [Pseudomonas putida W619]
 gi|169761422|gb|ACA74738.1| KpsF/GutQ family protein [Pseudomonas putida W619]
          Length = 324

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 198/321 (61%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   +  L +S+       F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTLRLEIEAVQGLTASIDA----NFVKACELILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMITR D+I+ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITRGDIILALSNSGSTAEIVTLLPLIKRLGIELIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPDSPLAQAAEVNLDARVAHEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH+G  +P V+ G  L DA+  +S K  G   V +   K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHAGTELPQVQRGTLLKDALLEMSRKGLGMTVVAEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  H IS L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKISALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 304 DKDDRPVGALNMHDLLRAGVM 324


>gi|212703574|ref|ZP_03311702.1| hypothetical protein DESPIG_01619 [Desulfovibrio piger ATCC 29098]
 gi|212672995|gb|EEB33478.1| hypothetical protein DESPIG_01619 [Desulfovibrio piger ATCC 29098]
          Length = 313

 Score =  247 bits (631), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 129/292 (44%), Positives = 182/292 (62%), Gaps = 2/292 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F  AV+ +  I GR+ +TG+GKSGH+  K+A+TLASTG+P+FF+H AEASHG
Sbjct: 24  LADSLDTAFDEAVDCLLHIDGRIAVTGMGKSGHVARKVAATLASTGSPAFFIHPAEASHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+ + D ++  S SG + EL  I+ YA R+ +PL+A+T    S++  +AD VL LP 
Sbjct: 84  DLGMLAKGDAVLAFSNSGETQELTDIIAYAARYRLPLVAVTKRPDSMLGKNADYVLQLPD 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+CP G APTTS  MQLA+GDALA+ LL++  F   DF   HPGGKLG       ++M
Sbjct: 144 VKEACPIGCAPTTSTTMQLALGDALALTLLQAHGFRPEDFRRFHPGGKLGKKLRQVKEIM 203

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H G+++PL     P+ D I I+S K FG V V ++G KL G I++GD+ R+   DL    
Sbjct: 204 HVGETLPLADPDTPMGDVIYIMSSKGFGAVGVTEKG-KLIGFISDGDLRRHMAPDLLQKK 262

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+M  +P  +  + L+  A+ LL +  I+   VVD   + IG +H  D+L
Sbjct: 263 ARDIMSLHPFSLSPECLVEKALALLAERKITSSFVVDH-DRVIGFIHVHDML 313


>gi|83950844|ref|ZP_00959577.1| Sugar phosphate Isomerase [Roseovarius nubinhibens ISM]
 gi|83838743|gb|EAP78039.1| Sugar phosphate Isomerase [Roseovarius nubinhibens ISM]
          Length = 320

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 130/297 (43%), Positives = 186/297 (62%), Gaps = 2/297 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +++  LS  F   +E +  ++GRV+++G+GKSGHI  K+A+T+ASTGTP+  VH  EASH
Sbjct: 25  AMREALSESFDRVIELLLDVRGRVIVSGMGKSGHIAHKIAATMASTGTPAQMVHPGEASH 84

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT  D +I++S SG + EL  ++ + RRFSIPLIAIT + +S +   AD VL LP
Sbjct: 85  GDLGMITAQDAVILISNSGETRELADMIAHTRRFSIPLIAITKKAESTLGQQADHVLELP 144

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
             PE+C  G+APTTS    LA+GDALA+AL+  R F   +F   HPGG LG   +    V
Sbjct: 145 DAPEACGIGMAPTTSTTCTLALGDALAVALMTQRGFERENFLDFHPGGTLGAQLLKVGSV 204

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MH GD++P+V     + + +  ++ K FG  AVV+ G  L G+IT+GD+ RN    L   
Sbjct: 205 MHKGDALPIVHEHSSMGETLIEMTAKGFGVAAVVERG-ILTGVITDGDLRRNL-DGLMER 262

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              ++  ++P+    D LLT A+ ++  + IS L VVD   +  G+VH  D LR G+
Sbjct: 263 KAGEIATRHPRSTRPDILLTEALGVMNANKISALFVVDAEGRLQGLVHIHDALRAGV 319


>gi|188996349|ref|YP_001930600.1| KpsF/GutQ family protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931416|gb|ACD66046.1| KpsF/GutQ family protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 315

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 141/320 (44%), Positives = 202/320 (63%), Gaps = 9/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E   L+ L+ SL       F  AV  I   KG+VVITGIGKSG +G K++
Sbjct: 3   LDIAKKTIDEEINALNRLKDSLDE----NFEKAVNLILNCKGKVVITGIGKSGIVGKKIS 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST +STGTPSFF+H AEA HGDLGM+ ++DLI+ +S SG + EL AI+   +R+   +I+
Sbjct: 59  STFSSTGTPSFFLHPAEAIHGDLGMVEKEDLILAISNSGETPELIAIIPILKRWGNKIIS 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT++  S +A ++D+VL L  + E+CP  LAPT+++   L +GDALA+ALL  R F E D
Sbjct: 119 ITNKKDSTLAKYSDVVLYLNVDKEACPLNLAPTSTSTATLVLGDALAVALLTLRGFKEED 178

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGG LG   +    +M     +PL     PL +AI  +SEK  G V +VD+   L
Sbjct: 179 FAKFHPGGSLGKKLMKVEHIMRK--DLPLSYTDAPLREAIIEMSEKGLGAVLIVDKNNNL 236

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R  +K   ++    +DVM KNPKV  +   +  A++L+ ++NI+VL VV+
Sbjct: 237 VGIITDGDLRRFINKGGSIDNSLAKDVMTKNPKVAEKHWYVLQALELMERYNITVLPVVE 296

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K IGIVH  D+L+ G+I
Sbjct: 297 NS-KPIGIVHIHDILKSGVI 315


>gi|332531202|ref|ZP_08407115.1| KpsF/GutQ family protein [Hylemonella gracilis ATCC 19624]
 gi|332039309|gb|EGI75722.1| KpsF/GutQ family protein [Hylemonella gracilis ATCC 19624]
          Length = 328

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 186/302 (61%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L   L  +F  AV+ +    GRVV+ G+GKSGH+G K+A+TLASTGTP+ FVH AEAS
Sbjct: 27  AALATRLDARFTAAVQCVLVSSGRVVVMGMGKSGHVGRKIAATLASTGTPAMFVHPAEAS 86

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMIT  D+++ +S SG S+EL  +L   +R  +PLIA+T    S +A HAD +L  
Sbjct: 87  HGDLGMITLKDVVLGISNSGESEELTVLLPLIKRMGVPLIAMTGRATSSLARHADHLLDT 146

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CPH LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L    S
Sbjct: 147 SVEKEACPHNLAPTASTTAQLAMGDALAMALLDARGFKAEDFARSHPGGALGRKLLTMVS 206

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+M S D +P V +   L+  +  +S K  G  A+VD+  +  G+ T+GD+ R   K  +
Sbjct: 207 DIMRSEDVVPKVPLDADLMTLMREISVKGLGAGAIVDQDNRPVGVFTDGDLRRLIEKGGE 266

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    + DVM  NP+ I  + L   A +L+ Q  I+ + VVD+  +  G ++  DL+R  
Sbjct: 267 IRHAKIRDVMHANPRTISREALAVEAAKLMEQQKITSVFVVDEAGRLCGALNANDLMRAK 326

Query: 340 II 341
           +I
Sbjct: 327 VI 328


>gi|291279430|ref|YP_003496265.1| arabinose-5-phosphate isomerase [Deferribacter desulfuricans SSM1]
 gi|290754132|dbj|BAI80509.1| arabinose-5-phosphate isomerase [Deferribacter desulfuricans SSM1]
          Length = 320

 Score =  247 bits (631), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/301 (47%), Positives = 197/301 (65%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL  +L+  F  AV+ I   KGR+V+TG+GKSG IG K+AST ASTGTPS F+H AE  H
Sbjct: 20  SLIEKLNDDFVKAVDIIYNCKGRLVVTGMGKSGLIGKKIASTFASTGTPSLFLHPAEGVH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI + D+++ +S SG +DEL +IL   +R  +PLI+I     S +A  +D VL   
Sbjct: 80  GDLGMIVKGDVVLAISNSGETDELVSILPIIKRLGVPLISIVGRLNSTLAKRSDCVLDAS 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP  LAPT S    LA+GDALA+ALLE R F E DF + HP G LG  L +  SD
Sbjct: 140 VEKEACPLNLAPTASTTAALALGDALAVALLEKRGFKEEDFALFHPSGSLGKRLLLKVSD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDL 280
           + H GD +P+VK    + +AI  +S K FGC  +VD+   L G++T+GD+ R    +KDL
Sbjct: 200 IFHMGDKVPVVKSDVTVTEAILEMSSKGFGCTTIVDDNGALIGVLTDGDLRRGLEKYKDL 259

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +V D+  KNPK I ED+L   A+Q++ +++I+ L+V+DD ++  GIVH  DLL+ GI
Sbjct: 260 FERNVMDIASKNPKTIDEDSLAAKALQIMEKYSITSLIVIDDKKRPYGIVHLHDLLKSGI 319

Query: 341 I 341
           +
Sbjct: 320 V 320


>gi|94498204|ref|ZP_01304765.1| sugar isomerase, KpsF/GutQ [Sphingomonas sp. SKA58]
 gi|94422334|gb|EAT07374.1| sugar isomerase, KpsF/GutQ [Sphingomonas sp. SKA58]
          Length = 358

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/319 (39%), Positives = 195/319 (61%), Gaps = 3/319 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQG-ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           V  A R++     GL +LE+     E +  F   V  +  ++GRV++TGIGKSG +  K+
Sbjct: 40  VDTACRTLSIAAGGLQALEAQFSDREFAATFLRMVGMLMKVRGRVIVTGIGKSGIVARKM 99

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +TL STGTP+ F+H A+A HGDLGM+T DD++++LS SG S EL  I+ Y +RF++PL+
Sbjct: 100 TATLTSTGTPAIFLHPADAGHGDLGMVTPDDVVLMLSHSGESTELGPIIQYCKRFAVPLM 159

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            +T++ +S VA  AD+ + +P   E+CP+ LAPTTS  +Q+A GDALA++L+E R FS +
Sbjct: 160 GMTAQPQSTVAQAADVCILMPDVQEACPNALAPTTSTTVQMAFGDALAVSLMEMRGFSAD 219

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF+  HP G+LG   +   ++M S D +P+V+    L+DA   ++  R G  AVVD   +
Sbjct: 220 DFHKFHPNGRLGAQLLKVRELMASDDQVPMVREDASLLDATIEMTRARLGGTAVVDRNGR 279

Query: 263 LKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           L G  T+GD+ R      N T  V   M   P+ +  D L + A+ ++ + NI +L V +
Sbjct: 280 LIGAFTDGDLRRTVTGKQNLTEPVGRFMTVTPQAVGPDELASEALHMMHERNIMLLFVCE 339

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  +  G +H  DLL  G+
Sbjct: 340 NG-RLTGALHMHDLLHAGV 357


>gi|114048833|ref|YP_739383.1| KpsF/GutQ family protein [Shewanella sp. MR-7]
 gi|113890275|gb|ABI44326.1| KpsF/GutQ family protein [Shewanella sp. MR-7]
          Length = 325

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/320 (42%), Positives = 206/320 (64%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRKAIPVIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+  DF
Sbjct: 126 TGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGFTREDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  S+VMHSGD +PLVK    + +A+  +S+K  G  AV+DE  KL
Sbjct: 186 AMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITEALYEISKKGLGMTAVIDEQNKL 245

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R  +   +L T  + DVM +N   I E+ L   A+Q++   NI+ L+V+D
Sbjct: 246 VGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNINGLIVID 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G ++ LD+++ G+I
Sbjct: 306 KEHHPVGALNMLDMVKAGVI 325


>gi|262373039|ref|ZP_06066318.1| arabinose 5-phosphate isomerase [Acinetobacter junii SH205]
 gi|262313064|gb|EEY94149.1| arabinose 5-phosphate isomerase [Acinetobacter junii SH205]
          Length = 325

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 199/321 (61%), Gaps = 10/321 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L +    ++  +F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KIALETLRIEQQAIEVLAT----QIDERFDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVPLTLGAADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VDE  +L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGSELPKVKPDTPMNKVLYEISDKRLGLTTIVDEQDRL 244

Query: 264 KGIITEGDIFRNF-HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            GI T+GD+ R   H+   D+N L V +VM KNP  + ++     A++ + +  I+  +V
Sbjct: 245 LGIFTDGDLRRMIDHQQGFDVN-LPVAEVMTKNPLTVSQEARAVEALEKMHERKINQFVV 303

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD  K IG++   DL++ G+
Sbjct: 304 VDDANKVIGVISMHDLIQAGV 324


>gi|325265999|ref|ZP_08132685.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
 gi|324982637|gb|EGC18263.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
          Length = 322

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 195/300 (65%), Gaps = 4/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           +  +L   F  AV+ +   +GRV++TG+GKSGHIG K+A+TLASTGTP+FFVH AEA+HG
Sbjct: 24  MAAQLDGAFARAVDAVLQSRGRVIVTGMGKSGHIGRKIAATLASTGTPAFFVHPAEAAHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   D+++ +S SG SDE+ AI+   +R  I LI IT + +S +A HADI +    
Sbjct: 84  DLGMIVDGDVVLAISNSGESDEILAIMPALKRRHITLICITGKPESSMAKHADIHIRAAV 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP GLAPT+S    LA+GDALAIALL +R F+  DF + HP G LG  L +   DV
Sbjct: 144 SQEACPLGLAPTSSTTAVLALGDALAIALLNARQFTPEDFALSHPAGSLGRRLLLTVGDV 203

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLN 281
           MHSGD++P+V+    L +AI  +S K  G VAV D    L G+ T+GD+ R F  H+ L 
Sbjct: 204 MHSGDALPVVRPESSLREAIIQMSGKGLGMVAVADGAGCLAGVFTDGDLRRLFERHEQLP 263

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L + +VM ++P  I  + LL+ A++L+++  I+ L V +   + +G ++  DLL+  I+
Sbjct: 264 DLPMSEVMTRHPATISPEKLLSEALKLMQEKRINGLPVCEGG-RLVGALNMYDLLKARIV 322


>gi|296271691|ref|YP_003654322.1| KpsF/GutQ family protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095866|gb|ADG91816.1| KpsF/GutQ family protein [Arcobacter nitrofigilis DSM 7299]
          Length = 319

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 196/295 (66%), Gaps = 6/295 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           SF  + AVE +   KG++++TG+GKSG +G+K+A+TLASTGT SFF+H  EA HGDLGMI
Sbjct: 26  SFDMNAAVELVYNTKGKLIVTGVGKSGLVGTKIAATLASTGTSSFFLHPTEAMHGDLGMI 85

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            +DD ++ +S+SG S+EL  IL + +RF IP+IA+     S +A +ADI   +    E+C
Sbjct: 86  GKDDTVLAISYSGESEELIQILPHLKRFDIPMIAMAKNPNSTLAKYADIFFDINVTKEAC 145

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGD 228
           P   APT+S  + +A+GDALA+ L++ RNF ++DF   HPGG LG  LF+  SD++ + +
Sbjct: 146 PLDTAPTSSTTLTMAMGDALAVCLMKKRNFQKSDFASFHPGGSLGKKLFIKVSDLLRT-E 204

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VE 286
            +P+V  G  L DAI  +SE R G V + D+ + + G++++GD+ R    D  +L   VE
Sbjct: 205 ELPIVSRGTLLKDAIVRMSEGRLGNVIITDDNEVI-GLLSDGDLRRALMDDNFSLECKVE 263

Query: 287 DVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++   NPKV+  +D L + A++++  + I +L+VVDD  K +G++H  DL+  GI
Sbjct: 264 EIATMNPKVLNNKDLLASDALKIIEDYKIQLLVVVDDSNKLVGVLHIHDLIEAGI 318


>gi|28198550|ref|NP_778864.1| polysialic acid capsule expression protein [Xylella fastidiosa
           Temecula1]
 gi|28056634|gb|AAO28513.1| polysialic acid capsule expression protein [Xylella fastidiosa
           Temecula1]
 gi|307579677|gb|ADN63646.1| polysialic acid capsule expression protein [Xylella fastidiosa
           subsp. fastidiosa GB514]
          Length = 333

 Score =  247 bits (630), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 199/329 (60%), Gaps = 6/329 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ TG+GKS
Sbjct: 8   HNHLSDTALIASARRVIEIEREALTL---LNERIGAPFVAACRLILNSHGRVISTGMGKS 64

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +
Sbjct: 65  GHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLK 124

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL+
Sbjct: 125 RQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLD 184

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF   HP G LG  L +  +DVMHSGD +P V     L +A+  ++ KR G  
Sbjct: 185 ARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMT 244

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  +
Sbjct: 245 AIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEAN 304

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 305 KINGLIVVDPQQRAVGALNIHDLLHAKIV 333


>gi|242241050|ref|YP_002989231.1| D-arabinose 5-phosphate isomerase [Dickeya dadantii Ech703]
 gi|242133107|gb|ACS87409.1| KpsF/GutQ family protein [Dickeya dadantii Ech703]
          Length = 328

 Score =  246 bits (629), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 142/341 (41%), Positives = 204/341 (59%), Gaps = 17/341 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
            SHFK        L      Q A R +++ E+  L+ L+  + G     F  A EK+   
Sbjct: 1   MSHFK--------LQPGFDFQTAGRQVLSIERDSLAQLDQYIDG----NFALACEKMFHC 48

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G+VV+ G+GKSGHIG K+A+T ASTGTPSFFVH  EASHGDLGMI   D++I +S SG 
Sbjct: 49  RGKVVVMGMGKSGHIGCKMAATFASTGTPSFFVHPGEASHGDLGMIAAQDVVIAISNSGE 108

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S E+ A++   +R  + LI +T    S +A  ADI L +    E+CP GLAPT+S    L
Sbjct: 109 SHEILALIPVLKRLQVCLICMTGNPDSTMAKTADIHLCVHVAQEACPLGLAPTSSTTAAL 168

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDALA+ALL++R F+  DF + HPGG LG  L +   D+MHSG+ IP V     L DA
Sbjct: 169 VMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRVEDIMHSGEEIPCVDSHASLRDA 228

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDT 300
           +  ++ K  G  A+ +  +K++GI T+GD+ R F  + +LN   + DVM +    +   T
Sbjct: 229 LLEITRKNLGMTAICNADRKIEGIFTDGDLRRVFDMNINLNNARITDVMTRGGIRVTPHT 288

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L   A+ L++  +I+ LMV DD  + +GI+H  D+LR G++
Sbjct: 289 LAVDALNLMQSRHITSLMVADD-DRLLGIIHMHDMLRAGVV 328


>gi|255318180|ref|ZP_05359419.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens SK82]
 gi|262379611|ref|ZP_06072767.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens
           SH164]
 gi|255304726|gb|EET83904.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens SK82]
 gi|262299068|gb|EEY86981.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens
           SH164]
          Length = 325

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 132/301 (43%), Positives = 184/301 (61%), Gaps = 6/301 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  ++  +F  A E I   KGRVV+TG+GKSGHIG K+A+T ASTGTPSFF+H  EA HG
Sbjct: 25  LAAQIDTRFERACEIILQCKGRVVVTGMGKSGHIGRKMAATFASTGTPSFFMHPGEAGHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+ R D++I +S SG SDE+  ++   +   +PLI I+      +  +AD+ LTL +
Sbjct: 85  DLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLEVPLITISGTESGPMPQNADVALTLGE 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
             E+CP GLAPT+S    LA+GDALA+ALLE+R F+ +DF   HP G LG  L +    +
Sbjct: 145 LTEACPLGLAPTSSTTATLALGDALAVALLEARGFTADDFARSHPAGALGKRLLLHVKHL 204

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----D 279
           MH  D +P V    P+   +  +S KR G   VVD    L GI T+GD+ R   +    D
Sbjct: 205 MHKDDELPKVSPDTPMNQVLYEISNKRLGLTTVVDTQNTLLGIFTDGDLRRLIDRQQGFD 264

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +N L V +VMIK+P  I ++     A++LLR   I+  +VVD   K IG++   DL++ G
Sbjct: 265 VN-LPVSEVMIKDPYTISQEARAVEALELLRDKKINQFVVVDQSNKVIGVISMHDLIQAG 323

Query: 340 I 340
           +
Sbjct: 324 V 324


>gi|313895051|ref|ZP_07828608.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975946|gb|EFR41404.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 328

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 135/331 (40%), Positives = 200/331 (60%), Gaps = 10/331 (3%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           SL  +   + A+ ++  E R ++ L+  +  E    F  AV  I   K RVV+TG+GKSG
Sbjct: 2   SLHTSMIQEKAVETLDLEARAVARLKERIDDE----FEAAVRAILDCKARVVVTGMGKSG 57

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R
Sbjct: 58  HVGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTTDDIVIAISNSGESNEVVNILSIIHR 117

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IA+    +S +   AD  + +  E E+CP GLAPT+S    LA+GDA+A+AL+ +
Sbjct: 118 IGARIIAMCGRRQSQLGRSADFYIDIGVEREACPLGLAPTSSTTATLAMGDAIAMALMAA 177

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R+F + D+ + HPGG LG  L +  S+VMH+GD  P+V     + DA+ ++++K  G  +
Sbjct: 178 RDFKKEDYALFHPGGALGRRLLLTVSNVMHTGDENPVVSYHTSVKDALFVMTDKGLGAAS 237

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   K  G++T+G I R   KD   L   V+++M   P  I  D +   A+ ++  H 
Sbjct: 238 VVDADGKFIGLVTDGIIRRALAKDYTFLDEEVQNIMFATPLTIAPDKMAAAALHVMEAHK 297

Query: 314 ---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++VL VVD     +GIVH  DLLR G++
Sbjct: 298 PRPVTVLPVVDAAGVPVGIVHLTDLLRQGVV 328


>gi|126668780|ref|ZP_01739728.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
 gi|126626763|gb|EAZ97412.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
          Length = 326

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 143/320 (44%), Positives = 205/320 (64%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL +I  E+  ++SLE  + GE    F  A + I A +GRVV+TG+GKSGHIG+K+A+
Sbjct: 11  ESALNTIRIERDAITSLEQRI-GE---SFTSACQTIMACRGRVVVTGMGKSGHIGNKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLGMIT  D++I +S SG+++E+  +L   +R   PLI++
Sbjct: 67  TLASTGTPAFFVHPGEASHGDLGMITSQDVVIAISNSGNTNEVVTLLPLLKRMGTPLISM 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S++A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R FS  DF
Sbjct: 127 TGDPQSLLAQEALANLDVSVLKEACPLGLAPTSSTTATLVMGDALAVALLEARGFSAEDF 186

Query: 205 YVLHPGGKLGTLFVCAS-DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG+LG   +    D+MHSG S+P+V  G  L  A+  +S K  G   VVD    L
Sbjct: 187 AFSHPGGRLGRRLLLRVLDIMHSGHSVPIVSEGTTLSGALLEISRKGLGMTTVVDSNGAL 246

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R+  K  D++T ++E +M +N K I  D L   A+ ++ +  IS L VV 
Sbjct: 247 IGVFTDGDLRRSLDKNVDVHTTAIEQLMTRNGKTIRADQLAVEALNIMEEMKISALPVVG 306

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G ++  DLLR G+I
Sbjct: 307 EHGELVGALNMHDLLRAGVI 326


>gi|241765938|ref|ZP_04763866.1| KpsF/GutQ family protein [Acidovorax delafieldii 2AN]
 gi|241364111|gb|EER59331.1| KpsF/GutQ family protein [Acidovorax delafieldii 2AN]
          Length = 331

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 134/297 (45%), Positives = 182/297 (61%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AV+++    GRVV+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLG
Sbjct: 35  RLDAHFVQAVQRVLQTTGRVVVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLG 94

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+T DDL++ +S SG S EL  +L   RR  +P+IA+T   +S +A HAD+ L    + E
Sbjct: 95  MVTADDLVLAISNSGESGELTVLLPVLRRLGVPMIAMTGGLQSTLARHADLTLDCSVQRE 154

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L    SDVM S
Sbjct: 155 ACPLNLAPTASTTAQLAMGDALAVALLDARGFRPEDFARSHPGGALGRKLLTHVSDVMRS 214

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLS 284
           G+++P V       + +  +S K  G  AVVD   ++ GI T+GD+ R      DL T +
Sbjct: 215 GEAVPRVPPDASFSELMREMSAKGLGAAAVVDGAGQVLGIFTDGDLRRRIEAGADLRTAT 274

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +VM   P+ I  D L   A +++  H I+ ++VV       G+VH  DL+R  +I
Sbjct: 275 AGEVMHAKPRRIAADALAVDAAEMMESHGITSVLVVGTDGALEGVVHIRDLMRAKVI 331


>gi|116052489|ref|YP_792802.1| hypothetical protein PA14_57890 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254238881|ref|ZP_04932204.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|313107042|ref|ZP_07793245.1| putative sugar isomerase [Pseudomonas aeruginosa 39016]
 gi|115587710|gb|ABJ13725.1| putative sugar isomerase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170812|gb|EAZ56323.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|310879747|gb|EFQ38341.1| putative sugar isomerase [Pseudomonas aeruginosa 39016]
          Length = 326

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K+A
Sbjct: 10  IHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHIGKKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 66  ATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 126 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAED 185

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 186 FAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 245

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 246 LAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 306 DADDRPVGALNMHDLLRAGVM 326


>gi|88861159|ref|ZP_01135793.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas tunicata D2]
 gi|88816881|gb|EAR26702.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas tunicata D2]
          Length = 323

 Score =  246 bits (629), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 128/331 (38%), Positives = 204/331 (61%), Gaps = 15/331 (4%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELS----FQFHCAVEKIKAIKGRVVITGIG 73
           +++   +  A R +  EK+ +  L   +    +      F+C        +GR+++ G+G
Sbjct: 1   MLQPEFIASATRVLAIEKQAIEQLNQYIDAHFAHACQIMFNC--------QGRIIVIGMG 52

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG+K+A+TLASTG+P+FFVH  EASHGDLGMIT+DD+++++S SG + E+  I+  
Sbjct: 53  KSGHIGNKIAATLASTGSPAFFVHPGEASHGDLGMITKDDVVLLISNSGETSEVLGIVPV 112

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R    +IA+T   +S +A H+D+ + +  E E+CP GLAPT S    L +GDALA+AL
Sbjct: 113 LKRLGAKMIAMTGNTQSSLATHSDVHICIKVEQEACPLGLAPTASTTATLVMGDALAVAL 172

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           LE++ F+ +DF + HPGG LG  L +   D+MH+GD++P V     + DA+  +S K  G
Sbjct: 173 LEAKGFTADDFALSHPGGSLGRRLLLTLKDIMHTGDAMPKVSSDAIIRDALIEMSAKGLG 232

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              +VD   +L G+ T+GD+ R   +  D++T S++ VM KN      D L   A+ ++ 
Sbjct: 233 MTTIVDSDNRLLGLFTDGDLRRILEQKIDIHTTSIQAVMTKNCTTASCDMLAAEALNIME 292

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +  I+ L++V+   +AIG ++  DLLR G+I
Sbjct: 293 RKRINGLLIVNQQNQAIGALNMQDLLRAGVI 323


>gi|261342642|ref|ZP_05970500.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315290|gb|EFC54228.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
          Length = 328

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  + S     A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAQLDQYINQDFSL----ACEKMFYCAGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +TS  +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLQVPLICMTSRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG L
Sbjct: 139 RAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K++GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKIQGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D  Q  +G+V
Sbjct: 259 RRVFDMGVDVRTLGIADVMTSGGIRVRPGTLAVEVLNLMQSRHITSVMVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|296391167|ref|ZP_06880642.1| hypothetical protein PaerPAb_23564 [Pseudomonas aeruginosa PAb1]
          Length = 324

 Score =  246 bits (628), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K+A
Sbjct: 8   IHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHIGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 184 FAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 244 LAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 304 DADDRPVGALNMHDLLRAGVM 324


>gi|149910598|ref|ZP_01899236.1| hypothetical sugar phosphate isomerase [Moritella sp. PE36]
 gi|149806326|gb|EDM66301.1| hypothetical sugar phosphate isomerase [Moritella sp. PE36]
          Length = 323

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 204/320 (63%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q AL  I  E   +S L   +  + +F   C  E + A KG+V++TG+GKSGHI +K+A+
Sbjct: 9   QSALNVINTEAAAISQLSQYI--DATFTATC--ELLIARKGKVIVTGMGKSGHIANKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH AEASHGDLGMI R D+++ LS SG SDE+ A+    +R SIP+IA+
Sbjct: 65  TLASTGTPAFFVHPAEASHGDLGMIERGDVVMALSNSGESDEILALYPVLKRLSIPIIAM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A I L +  + E+CP GLAPT+S    L +GDA+A+ALLE++ F+ NDF
Sbjct: 125 TGNADSTMAREAKISLCIKVDKEACPLGLAPTSSTTASLVMGDAIAVALLEAKGFTANDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG+LG  L +  SD+MH GD +P V+    + +A+  +S+K  G  A V+ G++L
Sbjct: 185 ALSHPGGRLGRKLLLRISDIMHKGDGVPSVQQSETISEALFEVSKKGLGMTA-VNNGKRL 243

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R  +   D++   + +VM +    I E  L   A+ ++    ++ L+VV+
Sbjct: 244 VGIFTDGDLRRILDARIDIHQTPISEVMTRRCVTINEHILAAEALAVMENKKVNGLIVVN 303

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + Q+ +G  +  DLLR G++
Sbjct: 304 EQQEPVGAFNMHDLLRAGVL 323


>gi|77919539|ref|YP_357354.1| arabinose-5-phosphate isomerase [Pelobacter carbinolicus DSM 2380]
 gi|77545622|gb|ABA89184.1| arabinose-5-phosphate isomerase [Pelobacter carbinolicus DSM 2380]
          Length = 320

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 133/303 (43%), Positives = 192/303 (63%), Gaps = 5/303 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++   L  +F  AVE I + +GRVVITG+GKSG I  K+A+T+ASTGTP+FF+H AE  H
Sbjct: 18  AMAQRLDERFVAAVELILSCQGRVVITGMGKSGLICQKIAATMASTGTPAFFLHPAEGIH 77

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+ + D++I +S SG+++E+  IL   +R  +PLIA+    +S +A  AD++L + 
Sbjct: 78  GDLGMLMKGDVVIAVSNSGNTEEIVRILPVIKRMGLPLIAMAGHPESALARAADVLLNVA 137

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP GLAPT S    LA+GDALA+ALLE R F E DF + HPGG LG  L +   D
Sbjct: 138 VREEACPLGLAPTASTTATLAMGDALAVALLERRGFREEDFALFHPGGALGKKLLLTVED 197

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MH+G  IPL  +  PL DA+  +S K+ G   V++   +L G+ T+GD+ R   +  D+
Sbjct: 198 LMHTGSDIPLASLTTPLKDALFEISSKKLGITGVLNATGELVGVFTDGDLRRTMGRGCDV 257

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA--IGIVHFLDLLRF 338
             L + DVM  +PK IL   L   A+Q + + +I+ L V DD      +GI+H  DLL+ 
Sbjct: 258 LDLPLGDVMSCHPKRILRSNLAAKAVQKMEEFSITSLFVFDDDDSTVPVGIIHLHDLLKA 317

Query: 339 GII 341
           G++
Sbjct: 318 GVV 320


>gi|120613412|ref|YP_973090.1| KpsF/GutQ family protein [Acidovorax citrulli AAC00-1]
 gi|120591876|gb|ABM35316.1| KpsF/GutQ family protein [Acidovorax citrulli AAC00-1]
          Length = 339

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 132/292 (45%), Positives = 181/292 (61%), Gaps = 3/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   V ++ A  GRVV+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  
Sbjct: 48  FADVVRRVLATSGRVVVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTTG 107

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL++ +S SG S EL  +L   RR  +PL+A+T   +S +A HAD+VL    E E+CP  
Sbjct: 108 DLVLAISNSGESGELTVLLPVLRRLGVPLVAMTGGLESTLARHADLVLDCGVEREACPLN 167

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPTTS   QLA+GDALA+ALL++R F   DF   HPGG LG  L    SDVM SG  +P
Sbjct: 168 LAPTTSTTAQLAMGDALAVALLDARGFRSEDFARSHPGGALGRKLLTHVSDVMRSGADVP 227

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVM 289
            V       + +  +S KR G  A+ D   ++ GI T+GD+ R      DL +++  +VM
Sbjct: 228 RVPPEASFSELMREMSAKRLGASAITDAQGRILGIFTDGDLRRRIEAGADLRSVTAGEVM 287

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              P+ I  D L   A +++ +H I+ ++V  +     G+VH  DL+R  +I
Sbjct: 288 HAGPRTIAPDALAADAAEMMERHAITSVLVASEGGVLAGVVHIGDLMRAKVI 339


>gi|71274803|ref|ZP_00651091.1| KpsF/GutQ [Xylella fastidiosa Dixon]
 gi|71900943|ref|ZP_00683057.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
 gi|71164535|gb|EAO14249.1| KpsF/GutQ [Xylella fastidiosa Dixon]
 gi|71729302|gb|EAO31419.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
          Length = 345

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 138/335 (41%), Positives = 202/335 (60%), Gaps = 6/335 (1%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           +V+   H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ 
Sbjct: 14  AVSSLQHNHLSDTALIASARRVIEIEREALTL---LNERIGAPFVAACRLILNSHGRVIS 70

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ 
Sbjct: 71  TGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRM 130

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L   +R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDAL
Sbjct: 131 LLPVLKRQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDAL 190

Query: 190 AIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           A+ALL++R F+  DF   HP G LG  L +  +DVMHSGD +P V     L +A+  ++ 
Sbjct: 191 AVALLDARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTR 250

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           KR G  A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A 
Sbjct: 251 KRLGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAA 310

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +L+  + I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 311 RLMEANKINGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|15599653|ref|NP_253147.1| arabinose-5-phosphate isomerase KdsD [Pseudomonas aeruginosa PAO1]
 gi|218893548|ref|YP_002442417.1| putative sugar isomerase [Pseudomonas aeruginosa LESB58]
 gi|254244729|ref|ZP_04938051.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9950693|gb|AAG07845.1|AE004860_1 arabinose-5-phosphate isomerase KdsD [Pseudomonas aeruginosa PAO1]
 gi|126198107|gb|EAZ62170.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218773776|emb|CAW29590.1| putative sugar isomerase [Pseudomonas aeruginosa LESB58]
          Length = 326

 Score =  246 bits (628), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K+A
Sbjct: 10  IHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 66  ATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 126 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAED 185

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 186 FAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 245

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 246 LAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 306 DADDRPVGALNMHDLLRAGVM 326


>gi|49088192|gb|AAT51542.1| PA4457 [synthetic construct]
          Length = 327

 Score =  246 bits (627), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K+A
Sbjct: 10  IHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 66  ATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 126 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAED 185

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 186 FAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 245

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 246 LAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 306 DADDRPVGALNMHDLLRAGVM 326


>gi|238756126|ref|ZP_04617447.1| Arabinose 5-phosphate isomerase [Yersinia ruckeri ATCC 29473]
 gi|238705665|gb|EEP98061.1| Arabinose 5-phosphate isomerase [Yersinia ruckeri ATCC 29473]
          Length = 328

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A EKI   +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLAQLDQYINED----FTRACEKIFYCQGKVVVMGMGKSGHIGCKIAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+T  D+++ +S SG S+E+ A+    +R  IPLI +T+   S + 
Sbjct: 79  FFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALTPVLKRLQIPLICMTNNPNSSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 KAADIHLCIKVPDEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + ++  +++GI T+GD+
Sbjct: 199 GRKLLLRISDIMHTGDEIPHVSPDASLRDALLEITRKNLGLTVICNDLMRIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    +  + L   A+ L++  +I+ L+V D  Q  +G+V
Sbjct: 259 RRVFDMGIDLNNAKIADVMTRGGIRVRPNMLAVDALNLMQSRHITALLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|182681230|ref|YP_001829390.1| KpsF/GutQ family protein [Xylella fastidiosa M23]
 gi|182631340|gb|ACB92116.1| KpsF/GutQ family protein [Xylella fastidiosa M23]
          Length = 345

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 199/329 (60%), Gaps = 6/329 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ TG+GKS
Sbjct: 20  HNHLSDTALIASARRVIEIEREALTL---LNERIGAPFVAACRLILNSHGRVISTGMGKS 76

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +
Sbjct: 77  GHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLK 136

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL+
Sbjct: 137 RQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLD 196

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF   HP G LG  L +  +DVMHSGD +P V     L +A+  ++ KR G  
Sbjct: 197 ARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMT 256

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  +
Sbjct: 257 AIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEAN 316

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 317 KINGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|157963425|ref|YP_001503459.1| KpsF/GutQ family protein [Shewanella pealeana ATCC 700345]
 gi|157848425|gb|ABV88924.1| KpsF/GutQ family protein [Shewanella pealeana ATCC 700345]
          Length = 325

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 206/325 (63%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N   Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGHIG
Sbjct: 4   ENQLRQWGTKVIDIEKQALDNLYQYID---SSEFAQACQLILQCTGKVIVMGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  +
Sbjct: 61  NKISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGL 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I++T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R F
Sbjct: 121 PMISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGF 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +++DF + HPGG LG  L +  SDVMH GD +P V+    + DA+  +S+K  G  AVVD
Sbjct: 181 TQDDFALSHPGGSLGRKLLLKVSDVMHKGDELPRVQDNICITDALYEISKKGLGMTAVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R    D+N  T  + DVM K    I E+ L   A++++   +I+ 
Sbjct: 241 SNNTLVGIFTDGDLRRVIDADVNLRTTPIADVMTKGCVTITENVLAAEALKVMDTKSING 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V++D Q+ +G ++ LD+++ G+I
Sbjct: 301 LVVINDKQQPVGALNMLDMVKAGVI 325


>gi|54310338|ref|YP_131358.1| sugar phosphate isomerase [Photobacterium profundum SS9]
 gi|46914779|emb|CAG21556.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           SS9]
          Length = 323

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 127/292 (43%), Positives = 194/292 (66%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A E I +  G+V++ G+GKSGHIG+K+A+TLASTGTPSFFVH  EASHGDLGMI + 
Sbjct: 33  FTQACELILSSHGKVIVMGMGKSGHIGNKIAATLASTGTPSFFVHPGEASHGDLGMIEKG 92

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ +S SG + E+ ++L   +R  IPLI++T + +S +A  + + L +    E+CP  
Sbjct: 93  DVVLAISNSGEASEILSLLPVIKRLGIPLISVTGKPESSMAKFSQVHLQITVAAEACPLN 152

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    LA+GDALAIAL+E+R F+ NDF + HPGG LG  L +C +DVMH+GD +P
Sbjct: 153 LAPTSSTTATLAMGDALAIALMEARGFTANDFALSHPGGALGRKLLLCIADVMHTGDLLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           ++     + DA+  +S K  G  AVV+  Q+L GI T+GD+ R   K  D++  ++ DVM
Sbjct: 213 IIDEAATIKDALLEVSRKGLGMTAVVNSEQQLTGIFTDGDLRRLLDKRVDIHNTAIGDVM 272

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +NP  I  + L    ++L+  + I+ L++ ++ Q  +G ++  DLL+ G++
Sbjct: 273 GRNPSTIEANVLAAEGLKLMEDNKINGLLITENGQ-LVGALNMHDLLKAGVM 323


>gi|237756413|ref|ZP_04584955.1| protein GutQ [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691429|gb|EEP60495.1| protein GutQ [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 315

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 140/320 (43%), Positives = 201/320 (62%), Gaps = 9/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E   L+ L+ SL       F  AV  I   KG+VVITGIGKSG +G K++
Sbjct: 3   LDIAKKTIDEEINALNRLKDSLDE----NFEKAVNLILNCKGKVVITGIGKSGIVGKKIS 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST +STGTPSFF+H AEA HGDLGM+ ++DLI+ +S SG + EL AI+   +R+   +I+
Sbjct: 59  STFSSTGTPSFFLHPAEAIHGDLGMVEKEDLILAISNSGETPELIAIIPILKRWGNKIIS 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT++  S +A ++D+VL L  + E+CP  LAPT+++   L +GDALA+ALL  R F E D
Sbjct: 119 ITNKKDSTLAKYSDVVLYLNVDKEACPLNLAPTSTSTATLVLGDALAVALLTLRGFKEED 178

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGG LG   +    +M     +PL     PL +AI  +SEK  G V +VD+   L
Sbjct: 179 FAKFHPGGSLGKKLMKVEHIMRK--DLPLSYTDTPLKEAIIEMSEKGLGAVLIVDKNDNL 236

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R  +K   ++    +D M KNPKV  +   +  A++L+ ++NI+VL VV+
Sbjct: 237 VGIITDGDLRRFINKGGSIDNSFAKDAMTKNPKVAEKHWYVLQALELMERYNITVLPVVE 296

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K IGIVH  D+L+ G+I
Sbjct: 297 NS-KPIGIVHIHDILKSGVI 315


>gi|107099958|ref|ZP_01363876.1| hypothetical protein PaerPA_01000979 [Pseudomonas aeruginosa PACS2]
          Length = 324

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K+A
Sbjct: 8   IHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 184 FAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 244 LAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 304 DADDRPVGALNMHDLLRAGVM 324


>gi|332531905|ref|ZP_08407789.1| arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038532|gb|EGI74975.1| arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 323

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 126/321 (39%), Positives = 207/321 (64%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++  LR +  E++ LS +   +       FH A + +   +GR+++ G+GKSGHIG+K+A
Sbjct: 7   IEQGLRVLDVERQALSDIAQYV----DENFHNACQLMYDCEGRIIVIGMGKSGHIGNKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R    +IA
Sbjct: 63  ATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRLGAKMIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ + +  E E+C  GLAPT+S    LA+GDA+A+ALLE+R F+ +D
Sbjct: 123 MTGNTQSTMATLANVHVCIKVEKEACSLGLAPTSSTTATLAMGDAMAVALLEARGFTADD 182

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   DVMHSG + P++ +   + DA+  +S K  G  A+VDE Q+
Sbjct: 183 FALSHPGGSLGKRLLLTLKDVMHSGANTPIIDVSQTVKDALIEMSAKGLGMTAIVDENQQ 242

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D++T  ++ VM K+     +D L   A+ ++ +  I+ L+VV
Sbjct: 243 LVGLFTDGDLRRILEQRIDIHTTQIDVVMTKSCTTATQDILAAEALNIMERKRINGLIVV 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  + IG ++  DLL+ G++
Sbjct: 303 NEKNQPIGALNMQDLLKAGVL 323


>gi|170729949|ref|YP_001775382.1| arabinose-5-phosphate isomerase [Xylella fastidiosa M12]
 gi|167964742|gb|ACA11752.1| Arabinose-5-phosphate isomerase [Xylella fastidiosa M12]
          Length = 345

 Score =  246 bits (627), Expect = 5e-63,   Method: Compositional matrix adjust.
 Identities = 137/335 (40%), Positives = 202/335 (60%), Gaps = 6/335 (1%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           +V+   H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ 
Sbjct: 14  AVSSLQHNHLSDTALIASARRVIEIEREALTL---LNERIGAPFVAACRLILNSHGRVIS 70

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ 
Sbjct: 71  TGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRM 130

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L   +R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L +GDAL
Sbjct: 131 LLPVLKRQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVVGDAL 190

Query: 190 AIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           A+ALL++R F+  DF   HP G LG  L +  +DVMHSGD +P V     L +A+  ++ 
Sbjct: 191 AVALLDARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTR 250

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           KR G  A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A 
Sbjct: 251 KRLGMTAIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAA 310

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +L+  + I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 311 RLMEANKINGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|71897590|ref|ZP_00679835.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
 gi|71732493|gb|EAO34546.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
          Length = 345

 Score =  245 bits (626), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 137/329 (41%), Positives = 198/329 (60%), Gaps = 6/329 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ TG+GKS
Sbjct: 20  HNHLSDTALIASARRVIEIEREALTL---LNERIGAPFVAACRLILNSHGRVISTGMGKS 76

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +
Sbjct: 77  GHIARKIAATLASTGTPGFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLK 136

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL+
Sbjct: 137 RQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLD 196

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF   HP G LG  L +  +DVMHSGD +P V     L +A+  ++ KR G  
Sbjct: 197 ARGFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMT 256

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  +
Sbjct: 257 AIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEAN 316

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 317 KINGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|212633562|ref|YP_002310087.1| KpsF/GutQ [Shewanella piezotolerans WP3]
 gi|212555046|gb|ACJ27500.1| KpsF/GutQ [Shewanella piezotolerans WP3]
          Length = 325

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 207/320 (64%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGTKVIDIEKQALDNLHQYVD---SSEFAQACQLILQCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  +P+I++
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGLPMISV 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+++DF
Sbjct: 126 TGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTKDDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SDVMHSG+ +PLVK    + DA+  +S+K  G  A+VD    L
Sbjct: 186 ALSHPGGSLGRKLLLKVSDVMHSGNELPLVKHDICITDALYEISKKGLGMTAIVDAANTL 245

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R    ++N  T S+ DVM K    I ++ L   A++++ + NI+ L+V++
Sbjct: 246 VGIFTDGDLRRVIDAEVNLRTTSIADVMSKGCVTITDNVLAAEALKVMEEKNINGLIVIN 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q+ +G ++ LD+++ G+I
Sbjct: 306 SKQQPVGALNMLDMVKAGVI 325


>gi|296104910|ref|YP_003615056.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059369|gb|ADF64107.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 328

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  + S     A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAQLDQYINQDFSL----ACEKMFYCVGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +TS  +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLQVPLICMTSRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG L
Sbjct: 139 RAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   V D+  K++GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVVCDDLMKIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D  Q  +G+V
Sbjct: 259 RRVFDMGVDVRTLGIADVMTPGGIRVRPGTLAVDVLNLMQSRHITSVMVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|195952546|ref|YP_002120836.1| KpsF/GutQ family protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932158|gb|ACG56858.1| KpsF/GutQ family protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score =  245 bits (626), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 130/291 (44%), Positives = 186/291 (63%), Gaps = 3/291 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A+  I   KG+V++TG+GKSGHI  K+AST+AS GTP+ F+H  EA HGDLG+I++
Sbjct: 29  DFEKAIYVIHRSKGKVILTGVGKSGHIARKIASTMASVGTPAVFLHPNEALHGDLGIISK 88

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++ LS SG S E+  ++ Y +     LI++T+   S +A  +DI + L  E E+CP 
Sbjct: 89  EDVVLALSNSGESAEILYMIPYIKMMGCFLISVTNNKNSTLAKQSDISIVLNIEKEACPL 148

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            LAPT+S    L +GDA+A++LL    F E DF +LHP G LG       DV H GD +P
Sbjct: 149 NLAPTSSTTAMLVLGDAMAMSLLRLSGFKEEDFALLHPAGFLGKKLKQVKDVGHFGDELP 208

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           +VK    + +AI  +++K FG  AVVDE  KL GI+T+GDI R      D+NT SV +V 
Sbjct: 209 IVKKDAKIYEAIIEITQKGFGATAVVDEAGKLVGILTDGDIRRILESKVDINTTSVYEVC 268

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            KNPK I +  +L  A+ L+  + I+VL++ +D +K IGI+H  D+LR GI
Sbjct: 269 TKNPKTISKSDILAKALSLMESYKITVLIIEED-EKPIGIIHLHDILRSGI 318


>gi|312959002|ref|ZP_07773521.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens WH6]
 gi|311286772|gb|EFQ65334.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens WH6]
          Length = 324

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 201/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L + +  +    F  A E I A KGRVV+ G+GKSGH+G+K+A
Sbjct: 8   IQSAQRTIRLELEAVEGLLAHIDAD----FVRACEMILASKGRVVVVGMGKSGHVGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMIT+DD+I+ LS SG+++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTAFFVHPAEASHGDMGMITKDDIILALSNSGTTNEIVTLLPLIKRLGIQMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A  A++ L +    E+CP  LAPT+S    L +GDAL++ALLE+R F+  D
Sbjct: 124 ITGNPDSTLAKAAEVNLNVHVAHEACPLNLAPTSSTTAALVMGDALSVALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSGD +P V+ G  L DA+  ++ K  G   +++   +
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGDELPHVQRGTLLKDALMEMTRKGLGMTVILEADGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D++T +++ VM  + K    + L   A++++  H I  L+VV
Sbjct: 244 LAGVFTDGDLRRTLDRTIDIHTATIDAVMTPHGKTARPEMLAAEALKIMEDHKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+    +G ++  DLLR G++
Sbjct: 304 DNHDHPVGALNMHDLLRAGVM 324


>gi|152980996|ref|YP_001355037.1| polysialic acid capsule expression protein [Janthinobacterium sp.
           Marseille]
 gi|151281073|gb|ABR89483.1| polysialic acid capsule expression protein [Janthinobacterium sp.
           Marseille]
          Length = 342

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 195/321 (60%), Gaps = 3/321 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E   + +L+  +  + S QF  AV  +   KGRVV++GIGKSGHI  K+A
Sbjct: 22  LQFACDTLQIEADAILALKERITSKTSQQFIQAVTLLLNCKGRVVVSGIGKSGHIARKIA 81

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           STLASTGTP+FFVHAAEASHGDLGMIT DD++I +S+SG + EL  I+   +R    LI 
Sbjct: 82  STLASTGTPAFFVHAAEASHGDLGMITADDVLIGISYSGEAGELLGIVPTIKRMGARLIT 141

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT  + S +A  AD+ L +  + E+CP  LAPT S    LA+GDALA+ALL++R F E D
Sbjct: 142 ITGNDASNLAVQADVHLNVHIDKEACPLNLAPTASTTATLALGDALAVALLDARGFGEED 201

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L     DVM +G++IP V     L  A+   S+K     AVVD   +
Sbjct: 202 FARSHPGGALGRRLLTHVRDVMRTGEAIPTVAKDATLYAALLESSKKGMAMTAVVDAEGR 261

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             G+ T+GD+ R     +D + LS+ +VM  +P+ +  D L   A+ ++  + I+ L+V 
Sbjct: 262 AIGVFTDGDLRRLIETQQDFSKLSIAEVMHASPRSVHPDQLAVDAVDMMETYRINQLLVT 321

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+  K +G +H  DL R  +I
Sbjct: 322 DNSGKLVGALHIHDLTRAKVI 342


>gi|239996750|ref|ZP_04717274.1| arabinose 5-phosphate isomerase [Alteromonas macleodii ATCC 27126]
          Length = 326

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 199/321 (61%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R I  E + +++L   L  E    F  A   + A KG+VV++G+GKSGHIG+K+A
Sbjct: 10  IDSAKRVIEIETQAIANLAERLNNE----FIAACNILFACKGKVVVSGMGKSGHIGNKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FF+H  EA+HGDLGM+++ D+++ +S SG ++EL  +L   +R  I ++A
Sbjct: 66  ATLASTGTPAFFMHPGEANHGDLGMLSKGDVLLAISNSGETNELVNLLPVVKRLGIQVVA 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S +  HAD+VL +  E E+C  GLAPT+S    L +GDALA+ALL+ + F+ +D
Sbjct: 126 MTNSASSSLGQHADVVLDISVEKEACSLGLAPTSSTTATLVMGDALAVALLDQKGFTSDD 185

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+M SG  IPLV     + DA+  +S+K  G   V+     
Sbjct: 186 FALSHPGGSLGRKLLLKVSDIMLSGSDIPLVHASASVADALLEISKKGLGMTGVIAADGT 245

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R  +   D+++ +VE+VM K  K      L   A+ L+  H IS LMV 
Sbjct: 246 LTGVFTDGDLRRILDARVDVHSATVEEVMTKGGKTTTAGQLAVEALNLMETHKISALMVT 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           DD +K +G  +   LL+ G++
Sbjct: 306 DDKRKPVGAFNMHMLLKAGVL 326


>gi|148652631|ref|YP_001279724.1| KpsF/GutQ family protein [Psychrobacter sp. PRwf-1]
 gi|148571715|gb|ABQ93774.1| KpsF/GutQ family protein [Psychrobacter sp. PRwf-1]
          Length = 332

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 129/299 (43%), Positives = 191/299 (63%), Gaps = 7/299 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L  +F  A E I+  KGRVV+TG+GKSGHIG K+A+T ASTG+PSFF+H  EA HGDLG
Sbjct: 34  QLDERFVEACELIRNCKGRVVVTGMGKSGHIGRKIAATFASTGSPSFFMHPGEAGHGDLG 93

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+   D+++ +S SG SDE+K +L   ++ +IPLI+I+ + + ++   AD+ LTL    E
Sbjct: 94  MLVAGDVLLAISNSGESDEIKTLLPVVKQLAIPLISISRDKRGMLPKSADVALTLGASEE 153

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+S    LA+GDA+A+AL+ +R+F+  DF + HP G LG  L +  SD+MH 
Sbjct: 154 ACPLGLAPTSSTTATLALGDAIAVALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQ 213

Query: 227 GD---SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
                 +PLV     L  A+ +++  R G   V++E  K+ GI T+GD+ R   K  DL 
Sbjct: 214 AQKDLQLPLVSTDTTLHQALFVMTNGRLGMAVVMEEAHKVVGIFTDGDLRRALEKHIDLQ 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T  +  +M  NPK I +D   + A+ L+ +  IS L+VVD+ Q+  G++   DLL+ G+
Sbjct: 274 T-PMSQIMTPNPKQISKDMRASDALSLMNEKAISQLLVVDEQQQLEGVISIHDLLQAGV 331


>gi|50084653|ref|YP_046163.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ADP1]
 gi|49530629|emb|CAG68341.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ADP1]
          Length = 325

 Score =  245 bits (625), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 194/321 (60%), Gaps = 10/321 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL +I  E+  +  L +    ++  +F  A E I   +GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KIALETISVEQHAIDVLVN----QIDERFDQACEIILQCQGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLEVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +ADI LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADIALTLGDSNEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+   +P V    P+   +  +S KR G   +VDE   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTQQELPKVSPDTPMNQVLYEISNKRLGLTTIVDENDHL 244

Query: 264 KGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            GI T+GD+ R   K    D+N L V  VM+++P  I ++     A+Q L +  I+  +V
Sbjct: 245 LGIFTDGDLRRLIDKQQGFDVN-LPVRQVMVEHPATISQEARAVEALQKLNEKKINQFVV 303

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD  K IG++   DL++ G+
Sbjct: 304 VDDQNKVIGVISMHDLIQAGV 324


>gi|124268993|ref|YP_001022997.1| arabinose-5-phosphate isomerase [Methylibium petroleiphilum PM1]
 gi|124261768|gb|ABM96762.1| Arabinose-5-phosphate isomerase [Methylibium petroleiphilum PM1]
          Length = 340

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 197/324 (60%), Gaps = 3/324 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             +V+   +++  E + L +L+  + G ++  F  AV  +   +GRVV+ G+GKSGH+G 
Sbjct: 17  QRSVEMGAQALAVEAQALGALQQRIVGPMADAFARAVAAMLVCRGRVVVMGMGKSGHVGR 76

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGM+T  D+++ +S SG SDEL AIL   +R  + 
Sbjct: 77  KIAATLASTGTPAMFVHPAEASHGDLGMVTPSDIVLAISNSGESDELAAILPVLKRLGVM 136

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT    S +A HA++VL      E+CP  LAPT S   Q+A+GDALA+ALL++R F 
Sbjct: 137 LIAITGRADSNLARHAELVLDSAVAQEACPLNLAPTASTTAQMALGDALAVALLDARGFK 196

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF   HPGG LG  L     DVM  GD++P V       D +  +S K  G  A+VD+
Sbjct: 197 EEDFARSHPGGSLGRKLLTHVRDVMRGGDAVPSVGPATAFTDLMREMSAKGLGATAIVDD 256

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +++GI T+GD+ R   K  DL  L+  +VM   P+ + +D L   A  L+  H I+ +
Sbjct: 257 AGRVQGIFTDGDLRRLIEKGGDLRALTAAEVMHPAPRTVRDDALAVDAADLMETHRITSV 316

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     +G ++  DLLR  +I
Sbjct: 317 LVVDAQGVLVGALNINDLLRAKVI 340


>gi|315635455|ref|ZP_07890721.1| arabinose 5-phosphate isomerase [Arcobacter butzleri JV22]
 gi|315480213|gb|EFU70880.1| arabinose 5-phosphate isomerase [Arcobacter butzleri JV22]
          Length = 320

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 127/301 (42%), Positives = 197/301 (65%), Gaps = 11/301 (3%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
            ++SF    A++ I   KG++++TG+GKSG +G+K+A+TLASTGT SFF+H  EA HGDL
Sbjct: 23  NKISFDIEKAIDLIVNSKGKLIVTGVGKSGLVGAKIAATLASTGTSSFFLHPTEAMHGDL 82

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GMI +DD+++ +S+SG S+EL  IL + +R +IPLIA+     S +A +AD+ + +  + 
Sbjct: 83  GMIGKDDIVLGISYSGESEELIQILPHLKRLNIPLIAMAKSENSTLAKYADVFINIAVDK 142

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP   APT+S  + +A+GDALA+ L++ R+F + DF   HPGG LG  LFV   D++ 
Sbjct: 143 EACPLDTAPTSSTTLTMAMGDALAVCLMKKRDFKKEDFASFHPGGSLGKKLFVKVDDLLK 202

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDL 280
             D++P V     L DAI ++SE R G V +VDE + + G++++GD+ R     NF  + 
Sbjct: 203 K-DNLPTVSRETKLKDAIIVMSEGRLGNVIIVDENRTVFGVLSDGDLRRALMNENFSINC 261

Query: 281 NTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           N   VED+   NPK +  +D L + A+Q++  + I +L+V D+  K IG++H  DL+  G
Sbjct: 262 N---VEDIATLNPKTLKNKDLLASDALQIIENYKIQLLIVTDENNKLIGLLHIHDLIEAG 318

Query: 340 I 340
           I
Sbjct: 319 I 319


>gi|295097684|emb|CBK86774.1| KpsF/GutQ family protein [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 328

 Score =  245 bits (625), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  + S     A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAQLDQYINQDFSL----ACEKMFYCAGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +TS  +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLHVPLICMTSRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG L
Sbjct: 139 RAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K++GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKIQGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D  Q  +G+V
Sbjct: 259 RRVFDMGVDVRTLGIADVMTPGGIRVRPGTLAVDVLNLMQSRHITSVMVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|84683742|ref|ZP_01011645.1| hypothetical protein 1099457000264_RB2654_20253 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668485|gb|EAQ14952.1| hypothetical protein RB2654_20253 [Rhodobacterales bacterium
           HTCC2654]
          Length = 320

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/322 (43%), Positives = 196/322 (60%), Gaps = 6/322 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +  A   +++E   L++L  SL  +    F  A + I    G+VV+ G+GKSGHI
Sbjct: 4   MPTTVIDTARDVLLSEAAALTTLADSLPAD----FEAAAQLILDRNGKVVVGGVGKSGHI 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STG+P+FF+H  EA+HGDLGMI   D  +++S SG + EL  ++ + +RF 
Sbjct: 60  GRKIAATLSSTGSPAFFIHPTEAAHGDLGMIEEHDTALLISNSGETSELLVMIEFCQRFD 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I I+S   S +   +   L LPK PE+CP  LAP TS  M LA+GDALA +L++ R 
Sbjct: 120 IPIIGISSVPGSTLMLASQCQLLLPKVPEACPIRLAPMTSTTMTLALGDALAASLMQKRG 179

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF V HPGGKLG   +    VMH GD +P++    P+ +A+  +SEK FG   ++ 
Sbjct: 180 FSPTDFGVFHPGGKLGVQLMRVGQVMHDGDRLPILTPDTPMKEAVLTISEKGFGTAGIM- 238

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           EG KL GIIT+GD+ RN    L   +  D+M K P     D  ++ A+  + +H +S L 
Sbjct: 239 EGDKLTGIITDGDVRRNIDG-LFDKTARDIMTKTPITTKTDVPVSQALSKIEEHAVSALF 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD   K IGIVH  DLLR G+
Sbjct: 298 VVDADGKPIGIVHLHDLLRLGV 319


>gi|294787873|ref|ZP_06753117.1| arabinose 5-phosphate isomerase [Simonsiella muelleri ATCC 29453]
 gi|294484166|gb|EFG31849.1| arabinose 5-phosphate isomerase [Simonsiella muelleri ATCC 29453]
          Length = 349

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 140/295 (47%), Positives = 190/295 (64%), Gaps = 8/295 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +++  F  A   I    GRV++ G+GKSGHIG K+A+T ASTGTP+FFVH AEA+HGDLG
Sbjct: 54  QINQTFIQATNAILTCTGRVIVMGMGKSGHIGRKIAATFASTGTPAFFVHPAEAAHGDLG 113

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ LS SG SDE+ AI+   +R  I LI ITS+  S +A HADI +      E
Sbjct: 114 MIVDGDVVLALSNSGESDEILAIIPALKRRQITLICITSKPNSSMAKHADIHIQAAVSHE 173

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+S    LA+GDALAI LL++R F+ +DF + HP G LG  L +   DVMHS
Sbjct: 174 ACPLGLAPTSSTTAVLALGDALAIVLLKARQFTTDDFALSHPAGSLGRRLLLTVGDVMHS 233

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KD-LNTLS 284
           GD +P V    PL +A+  +SEK  G +AVVD    L+GI+T+GD+ R F  +D    L+
Sbjct: 234 GDDLPAVMEYTPLKNAVITMSEKGLGMLAVVDCSGSLQGILTDGDLRRLFQTRDYFADLT 293

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA--IGIVHFLDLLR 337
           V DVM  NP  I  + L + A++L++Q  IS L+V   C+    IG ++  DLL+
Sbjct: 294 VNDVMKTNPTTITPEKLASEAVKLMKQKRISGLLV---CKNNILIGALNMHDLLK 345


>gi|269468984|gb|EEZ80557.1| sugar phosphate isomerase [uncultured SUP05 cluster bacterium]
          Length = 321

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 135/326 (41%), Positives = 199/326 (61%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A   I+ E + ++ L  SL  + SF   C  + I+   G+V++ G+GKSGHI
Sbjct: 1   MSNSLIQSAKDVILTEAQAVTKLAESL--DQSFVDAC--QLIQNCTGKVILIGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+T ASTGTPSF VH  EA HGDLGMIT  D++I +S+SG SDE+  ++   +R  
Sbjct: 57  GNKIAATFASTGTPSFAVHPGEAGHGDLGMITEGDVVITISYSGESDEIMTLVPVIQRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+I +T    S +    ++ L +  E E+CPH LAPT+S  + LA+GDALA++LL  + 
Sbjct: 117 VPIIGMTGNAHSSIGEVCNVHLDVGVEKEACPHNLAPTSSTTVALAMGDALAVSLLTEKG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG  L     ++M +GD IP+V     L+DA+ ++S+K  G V + 
Sbjct: 177 FSPDDFARSHPSGALGRRLLTFVKNIMKTGDDIPMVSADTKLLDALLVMSQKALGMVLIT 236

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D G  LKGI T+GD+ R    H D+  L++ DVM  N K I       VA+Q++ + N++
Sbjct: 237 D-GSALKGIFTDGDLRRVLEEHSDIQALTIGDVMTPNCKSISASKPAVVAVQIMDEFNLN 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD    +G ++   L++  II
Sbjct: 296 SLPVVDDNNHVVGAINTHTLMQAKII 321


>gi|262376232|ref|ZP_06069462.1| arabinose 5-phosphate isomerase [Acinetobacter lwoffii SH145]
 gi|262308833|gb|EEY89966.1| arabinose 5-phosphate isomerase [Acinetobacter lwoffii SH145]
          Length = 347

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 196/321 (61%), Gaps = 10/321 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E+  L  L +    ++  +F  A E I    GR+VITG+GKSGHIG K+A+
Sbjct: 31  KVALETLRIEENALQILAT----QIDDRFSRACEIILQCTGRLVITGMGKSGHIGRKMAA 86

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+   D++I +S SG SDE+  ++   +   IPLI I
Sbjct: 87  TFASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKHLEIPLITI 146

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + +++  +  +AD+ LTL    E+CP GLAPT+S    LA+GDALA+ALL++R F+ +DF
Sbjct: 147 SGDDRGPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARGFTSDDF 206

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +M +G  +P V     +   +  +S KR G   VVDE   L
Sbjct: 207 ARSHPAGALGKRLLLHVKHLMRTGADLPKVSPDTAMNKVLYEISNKRLGLTTVVDENDVL 266

Query: 264 KGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            GI T+GD+ R   K    D+N L+++DVM KNP  I ++    VA++ + +H I+  +V
Sbjct: 267 LGIFTDGDLRRLIDKQQGFDVN-LAIQDVMTKNPLTISQEARAVVALERMNEHKINQFVV 325

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD  K IG++   DL++ G+
Sbjct: 326 VDDANKVIGVISMHDLIQAGV 346


>gi|126738421|ref|ZP_01754126.1| arabinose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
 gi|126720220|gb|EBA16926.1| arabinose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
          Length = 322

 Score =  244 bits (624), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/291 (43%), Positives = 183/291 (62%), Gaps = 3/291 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F  A   I +  GRV+++GIGKSGHIG K+A+TLASTGTP+ FVH AEASHGDLGM+++
Sbjct: 32  RFAEAARLILSATGRVIVSGIGKSGHIGHKIAATLASTGTPAHFVHPAEASHGDLGMLSK 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S SG + EL  +L + RRF IPLI ++S+ +S +   AD+ L +P   E+C +
Sbjct: 92  GDVVLAISNSGEAPELANLLAFTRRFGIPLIGLSSKPQSTLMTQADVHLQIPAMGEACGY 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
           G+ P+ S  + LA+GDALAIA+++ R+F   +F   HPGGKLG      SD+MHSG+++P
Sbjct: 152 GIVPSISTTLTLAMGDALAIAIMKHRDFRPENFRDFHPGGKLGAQLSKVSDLMHSGEALP 211

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           LV     + + +  +S+K FG   V+DE + L GIIT+GD+ R+    L       VM  
Sbjct: 212 LVTSATAMSETLIEISQKGFGVAGVIDENKLLLGIITDGDLRRHMEGLLQN-DASAVMTA 270

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRFGI 340
            P  I    L   A+ ++ Q  I+ L V D  D  K  G++H  D LR G+
Sbjct: 271 APTTIAPTALAEEALAIMNQRKITCLFVTDPEDNDKVKGLLHIHDCLRAGL 321


>gi|285018899|ref|YP_003376610.1| sugar phosphate isomerase involved in capsule formation, kpsf/gutq
           protein [Xanthomonas albilineans GPE PC73]
 gi|283474117|emb|CBA16618.1| putative sugar phosphate isomerase involved in capsule formation,
           kpsf/gutq protein [Xanthomonas albilineans]
          Length = 333

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 128/285 (44%), Positives = 182/285 (63%), Gaps = 3/285 (1%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I A +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS
Sbjct: 49  ILASRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITDADVVLALS 108

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SG SDE+  +L   +R    +IA+T   +S +A  AD+ L +    E+CP  LAPT+S 
Sbjct: 109 YSGESDEILMLLPVLKRQGNAVIAMTGRAQSTLAREADLHLDISVPAEACPLDLAPTSST 168

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCP 238
              LA+GDALA+ALL++R F+ +DF   HP G LG  L +  +DVMHSG+ +P V+    
Sbjct: 169 TASLALGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHSGEELPKVREDAS 228

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVI 296
           + +A+  +S KR G  AVVD   +L G+ T+GD+ R     LN     + +VM + P+ I
Sbjct: 229 VSEALVEMSRKRLGMTAVVDADDRLLGLFTDGDLRRTLDSALNVRQTRIAEVMTRQPRTI 288

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             D L   A +L+  H I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 289 GADQLAAEAARLMETHQINGLIVVDAAGRAVGALNIHDLLRARVV 333


>gi|237809668|ref|YP_002894108.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
 gi|237501929|gb|ACQ94522.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
          Length = 324

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 130/307 (42%), Positives = 198/307 (64%), Gaps = 4/307 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L ++E   Q  L  QF  A + +   KG+V++ G+GKSGHIG K+A++ ASTGTP+FFVH
Sbjct: 19  LQAIEGLFQ-TLDEQFTQACQMLFHCKGKVIVMGMGKSGHIGRKMAASFASTGTPAFFVH 77

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             EASHGDLGMI+ +D++I +S SG S+E+ A+L   +R+ I LI +TS  +S +A  AD
Sbjct: 78  PGEASHGDLGMISSNDVVIAISNSGESNEILAVLPVMKRWGIKLICMTSRPESTMAKEAD 137

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           I L L  E E+CP GLAPT+S    L +GDALA++LLE+R F+ NDF + HPGG LG  L
Sbjct: 138 IHLCLHVEQEACPLGLAPTSSTTATLVLGDALAVSLLEARGFTANDFAMSHPGGALGRKL 197

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  +D+MH G+ IP V     + DA+  +S K  G  A++D+   L GI T+GD+ R  
Sbjct: 198 LLRNADIMHQGEQIPAVSDKASVSDALLEMSRKGLGMTAILDDTGTLAGIFTDGDLRRIL 257

Query: 277 HK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  D++T S+  VM  N   +  + L+  +++L+++  I+ L+V+D   + +G  +  D
Sbjct: 258 DQQLDIHTTSITKVMTTNCITVPAEMLVAQSVKLMQERKINALIVLDKQHRPVGAFNMHD 317

Query: 335 LLRFGII 341
           +L+ G++
Sbjct: 318 VLKAGVV 324


>gi|302037869|ref|YP_003798191.1| arabinose-5-phosphate isomerase [Candidatus Nitrospira defluvii]
 gi|300605933|emb|CBK42266.1| Arabinose-5-phosphate isomerase [Candidatus Nitrospira defluvii]
          Length = 345

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 199/332 (59%), Gaps = 7/332 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           R      ++++VQ   R +  E R +  L +     L  +F  AV  +   +G+VVI+G+
Sbjct: 18  RAARRPQQDASVQEGRRVLEIEARAVQELMA----RLDDRFASAVNFLYECQGKVVISGM 73

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSG IG K+A+TLASTGTPSFF+H AE  HGDLGM+ R D++I +S SG + E+  +L 
Sbjct: 74  GKSGLIGQKIAATLASTGTPSFFLHPAEGVHGDLGMLARRDVLIAISNSGETQEVLQLLP 133

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + +R +IP++ +T +  S +A ++D+ L +  + E+CP GLAPT S    LA+GDALA+A
Sbjct: 134 FVKRMNIPVVGMTGKMGSTLAKNSDVTLDVSVDEEACPLGLAPTASTTATLAMGDALAVA 193

Query: 193 LLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           LL+ R F  +DF   HPGG LG  L V   D+M  GD +P V+      D I  ++ K+ 
Sbjct: 194 LLQKRGFKHDDFAQFHPGGTLGRRLLVKVRDLMQHGDHLPRVRDNVSGADMILEMTSKKL 253

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           G   VVD    L GI+T+GD+ R      D + ++  D+  + PK I  D L T A+ L+
Sbjct: 254 GMTTVVDAKGALYGIVTDGDLRRFIQAGGDFSNITAGDLASRQPKTIGPDELATTAVALM 313

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + +I+ L+V++   +  G++H  DLL+ GI+
Sbjct: 314 ERFSITALVVLERPNRLAGVIHLHDLLKHGIV 345


>gi|270263242|ref|ZP_06191512.1| arabinose 5-phosphate isomerase [Serratia odorifera 4Rx13]
 gi|270042930|gb|EFA16024.1| arabinose 5-phosphate isomerase [Serratia odorifera 4Rx13]
          Length = 328

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 23  ERDGLAQLDRYINAD----FTRACELIAGCCGKVVVMGMGKSGHIGCKIAATFASTGTPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T  D+++ +S SG S+E++A++   +R  IPLI +T+  +S + 
Sbjct: 79  FFVHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQQIPLICMTNNPESSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MHSGD IP V     L DA+  ++ K  G   + D+  K+ GI T+GD+
Sbjct: 199 GRRLLLRVCDIMHSGDEIPHVSADASLRDALLEITRKNLGMTVICDDLMKIAGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    +LN   + DVM      +  + L   A+ L++Q +I+ L+V D  Q  +G+V
Sbjct: 259 RRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITALLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|91205589|ref|YP_537944.1| KpsF [Rickettsia bellii RML369-C]
 gi|91069133|gb|ABE04855.1| KpsF [Rickettsia bellii RML369-C]
          Length = 319

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+    A R I +E   L  L   +  +    F+  VE + + KGRVV+TGIGKSG+I  
Sbjct: 5   NNYENVAKRVISSEASALKKLSEHIPED----FNRIVEFLLSFKGRVVLTGIGKSGYIAK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A++ +STG P+F++H AEASHGDLGMIT+DDL+I+LS SG + EL  I+ Y + FS+ 
Sbjct: 61  KIAASFSSTGMPAFYIHPAEASHGDLGMITKDDLVIMLSNSGETKELFNIIKYCKDFSVK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + A+T    S +A ++D +L +P+  E+   G APT S+++ L++GDAL   + E + F+
Sbjct: 121 IAAMTMNKNSTLAANSDFLLIVPEYSEASIIG-APTVSSLIMLSLGDALMTVIHEVKGFT 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ++DF   HPGG +G        +M SGD IPLV    P  + I ++++KR GC  V+D+ 
Sbjct: 180 KDDFKSYHPGGSIGANLTEIKHLMRSGDQIPLVHEDTPFAETIIVMNKKRLGCTLVIDKA 239

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L G+IT+GD+ R+ +  ++  +  D+M KNP  I  +      + L++  NI+ L +V
Sbjct: 240 KNLVGVITDGDLRRHINDQIHLKTASDIMTKNPVYISSEIFAKEVLDLMKAKNITNLPIV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+    IGI H  DLLR G+
Sbjct: 300 DN-NTIIGITHIHDLLRAGV 318


>gi|157736322|ref|YP_001489005.1| carbohydrate isomerase KpsF/GutQ family protein [Arcobacter
           butzleri RM4018]
 gi|157698176|gb|ABV66336.1| carbohydrate isomerase, KpsF/GutQ family [Arcobacter butzleri
           RM4018]
          Length = 320

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 126/301 (41%), Positives = 197/301 (65%), Gaps = 11/301 (3%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
            ++SF    A++ I   KG++++TG+GKSG +G+K+A+TLASTGT SFF+H  EA HGDL
Sbjct: 23  NKISFDIEKAIDLIVNSKGKLIVTGVGKSGLVGAKIAATLASTGTSSFFLHPTEAMHGDL 82

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GMI +DD+++ +S+SG S+EL  IL + +R +IPLIA+     S +A +AD+ + +  + 
Sbjct: 83  GMIGKDDIVLGISYSGESEELIQILPHLKRLNIPLIAMAKSENSTLAKYADVFINIAVDK 142

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP   APT+S  + +A+GDALA+ L++ R+F + DF   HPGG LG  LFV   D++ 
Sbjct: 143 EACPLDTAPTSSTTLTMAMGDALAVCLMKKRDFKKEDFASFHPGGSLGKKLFVKVDDLLK 202

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDL 280
             D++P V     L DAI ++SE R G V ++DE + + G++++GD+ R     NF  + 
Sbjct: 203 K-DNLPTVSRETKLKDAIIVMSEGRLGNVIIIDENRTVFGVLSDGDLRRALMNENFSINC 261

Query: 281 NTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           N   VED+   NPK +  +D L + A+Q++  + I +L+V D+  K IG++H  DL+  G
Sbjct: 262 N---VEDIATLNPKTLKNKDLLASDALQIIENYKIQLLIVTDENNKLIGLLHIHDLIEAG 318

Query: 340 I 340
           I
Sbjct: 319 I 319


>gi|294139190|ref|YP_003555168.1| KpsF/GutQ family carbohydrate isomerase [Shewanella violacea DSS12]
 gi|293325659|dbj|BAJ00390.1| carbohydrate isomerase, KpsF/GutQ family [Shewanella violacea
           DSS12]
          Length = 325

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 202/324 (62%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q   + I  E++ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NKLRQWGKKVIDVERKALDNLYQYVD---SAEFAAACKLIFECTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++T ASTGTP+FFVH  EASHGDLG+++ DD+I+ +S SG + E+  ++   +R  +P
Sbjct: 62  KISATFASTGTPAFFVHPGEASHGDLGVLSEDDIILAISNSGEASEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T   +S +A HA + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 IIALTGNPESTMAKHAVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF + HPGG LG  L +  SDVMH G  +PLV+    + DA+  +S K  G  AV D+
Sbjct: 182 RDDFALSHPGGMLGRKLLLKVSDVMHKGSELPLVRHNICVTDALYEISNKGLGMTAVTDD 241

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R  +   +L   S+ DVM K    I E  L   A++++ + +I+ L
Sbjct: 242 DNKLVGIFTDGDLRRVIDAQVNLRETSISDVMSKACTTISEGILAAEALKVMDEKDINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           ++VDD    IG ++ LD+++ G+I
Sbjct: 302 IIVDDNNTPIGALNMLDMVKAGVI 325


>gi|332994375|gb|AEF04430.1| arabinose 5-phosphate isomerase [Alteromonas sp. SN2]
          Length = 324

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +NS +  A R I  E + +S+L S +  +    F  A   ++   G+VV+ G+GKSGHIG
Sbjct: 4   ENSFITSAKRVIEIEAQAISALSSRMNDD----FVTACNLLQNCVGKVVVCGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA+HGDLGM+++ D+++ +S SG + EL  +L   +R ++
Sbjct: 60  HKIAATLASTGTPSFFMHPGEANHGDLGMLSKGDVLLAISNSGETAELVNLLPIVKRLNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T+   S +  HAD+VL +  E E+C  GLAPT+S    L +GDALA+ALL+ + F
Sbjct: 120 PVIAMTNSVTSSLGQHADVVLNISVEKEACSLGLAPTSSTTATLVMGDALAVALLDRKGF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG  L +  SD+M +G  +PLV     + +A+  +S+K  G   V+D
Sbjct: 180 TSDDFALSHPGGSLGRKLLLKVSDIMLTGSELPLVDENALVAEALLEISKKGLGMTGVID 239

Query: 259 EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R  +   DL+T +V  VM K  K  + + L   A+ ++  H IS 
Sbjct: 240 SDGVLVGIFTDGDLRRILDARIDLHTATVTQVMTKGGKTTMPEQLAVEALNVMETHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           LMV DD +K +G  +   LL+ G++
Sbjct: 300 LMVTDDARKPVGAFNMHMLLKAGVL 324


>gi|171464187|ref|YP_001798300.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193725|gb|ACB44686.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 330

 Score =  244 bits (623), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/325 (40%), Positives = 199/325 (61%), Gaps = 3/325 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  T++ A  ++  E   L ++   L+G  +     AVE +   KGR+V++GIGKSGHI 
Sbjct: 6   RERTLKLARDTLTIEAAALQTMRDRLEGVNADALILAVELLHGCKGRIVVSGIGKSGHIA 65

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTG+P+FFVH AEASHGDLGM+TRDD+ + LS SG +DEL  I+   +R   
Sbjct: 66  RKIAATFASTGSPAFFVHPAEASHGDLGMVTRDDVFVALSNSGETDELLTIVPIVKRTGA 125

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T    S +A  AD  L    E E+CP  LAPTTS    LA+GDALA+ALL++R F
Sbjct: 126 KLIALTGAPNSSLAKLADAHLDTSVEKEACPLNLAPTTSTTAALAMGDALAVALLDARGF 185

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG+LG    +  S+VM +    P + I  PL +A+  ++ KR G V ++D
Sbjct: 186 EAEDFIRSHPGGRLGRKQLMHVSEVMRNLAETPKISINAPLQEALLEMTAKRMGMVVILD 245

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + QK+ GI+T+GD+ R+  K  +L+ + +E V   +P+ I  + L   A++++ +H I+ 
Sbjct: 246 DEQKVFGILTDGDLRRSLEKTTNLSGIKLESVTTADPRTIPAELLAEEAIEMMEKHRINH 305

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D+    +G ++  DL    +I
Sbjct: 306 LVVTDNKGLLLGALNLHDLFAAKVI 330


>gi|319765046|ref|YP_004128983.1| kpsf/gutq family protein [Alicycliphilus denitrificans BC]
 gi|330827238|ref|YP_004390541.1| KpsF/GutQ family protein [Alicycliphilus denitrificans K601]
 gi|317119607|gb|ADV02096.1| KpsF/GutQ family protein [Alicycliphilus denitrificans BC]
 gi|329312610|gb|AEB87025.1| KpsF/GutQ family protein [Alicycliphilus denitrificans K601]
          Length = 333

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 186/301 (61%), Gaps = 9/301 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           G L   F  AV+++ A  GRV++ G+GKSGH+G K+A+TLASTGTPSFFVH AEASHGDL
Sbjct: 36  GRLGAVFVQAVQRVLATSGRVIVMGMGKSGHVGRKIAATLASTGTPSFFVHPAEASHGDL 95

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GM+   DL++ +S SG S E+  +L   +R  +PLIA+T   +S +A HAD+VL    E 
Sbjct: 96  GMVAGGDLVLAISNSGESSEITVLLPMLKRQGVPLIAMTGGLQSTLARHADLVLDCSVER 155

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP  LAPTTS  +QLA+GDALA+ALL++R F   DF   HPGG LG  L     DVM 
Sbjct: 156 EACPLNLAPTTSTTVQLAMGDALAVALLDARGFRPEDFARSHPGGALGRRLLTHVRDVMR 215

Query: 226 SGDSIPLVKIGCPLIDAITILSE---KRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDL 280
           +G  +P V    P  D  T++ E   K  G  AVVDE     GI T+GD+ R      DL
Sbjct: 216 TGGQVPRVP---PQADFSTLMREMSAKGVGASAVVDEAGCPVGIFTDGDLRRRIEAGADL 272

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +  +DVM  +P+ I  D L   A Q + +H+I+ ++V D     +G+VH  DL+R  +
Sbjct: 273 RGMRAQDVMHASPRTIAADALAADAAQAMERHSITSVLVTDAQGVLVGVVHIGDLMRAKV 332

Query: 341 I 341
           I
Sbjct: 333 I 333


>gi|222055368|ref|YP_002537730.1| KpsF/GutQ family protein [Geobacter sp. FRC-32]
 gi|221564657|gb|ACM20629.1| KpsF/GutQ family protein [Geobacter sp. FRC-32]
          Length = 321

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/292 (44%), Positives = 184/292 (63%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV  I + +GRVV+TG+GKSG IG K+ASTLASTGTP+FF+H AE  HGDLGMI + 
Sbjct: 29  FEKAVRLILSSRGRVVVTGMGKSGLIGQKIASTLASTGTPAFFLHPAEGIHGDLGMIIKG 88

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG ++E+  IL   +R    ++A+T    S +A   D+ L +  + E+CP G
Sbjct: 89  DVVIAISNSGETEEVVRILPIIKRLGADIVAMTGNPSSTLAKSGDVFLDISVKEEACPLG 148

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT S    LA+GDALA+ALL  R F   DF + HPGG LG  L +   D+MH G+ +P
Sbjct: 149 LAPTASTTATLAMGDALAVALLLERGFKAEDFALFHPGGALGKKLILKVEDIMHQGNEVP 208

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVM 289
           LVK+G  + +A+ +++ K  G   VVDE   + G+IT+GD+ R   K L+   L V+D+M
Sbjct: 209 LVKVGTLMREALFVITSKGLGITGVVDETGAMAGVITDGDLRRALEKGLDIINLPVDDLM 268

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
             +PK I    +   A+Q + Q +I+ L V +D     +GI+H  DLL+ GI
Sbjct: 269 SMSPKRIRRTEMAAKALQQMEQFSITSLFVFEDRGSIPVGIIHLHDLLKSGI 320


>gi|332294923|ref|YP_004436846.1| KpsF/GutQ family protein [Thermodesulfobium narugense DSM 14796]
 gi|332178026|gb|AEE13715.1| KpsF/GutQ family protein [Thermodesulfobium narugense DSM 14796]
          Length = 323

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/292 (45%), Positives = 191/292 (65%), Gaps = 3/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A++ I   +GRV+ITG+GKSG IG K+A+TL+STGTPS F+H AE  HGDLGM+T  
Sbjct: 32  FLDAIDLILGCEGRVIITGMGKSGLIGRKIAATLSSTGTPSLFLHPAEGIHGDLGMVTGK 91

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL+I +S+SG + EL  IL   +R  + +IA+T    S ++  ADIVL +  + E+CP+ 
Sbjct: 92  DLVIAISYSGENTELITILPVLKRIGVKVIAMTGNLSSTLSTFADIVLDIGVKKEACPYN 151

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           + PT+S  + L +GDA+AI LL+ RNF   DF + HPGG LG +L     D+MH G+  P
Sbjct: 152 IVPTSSTTVTLVLGDAIAICLLKLRNFRPQDFALFHPGGALGRSLITRVCDLMHKGEENP 211

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVM 289
           +V +   + +A+  +S+K  G V+VVD+   LKGIIT+GDI R    D   L    E+VM
Sbjct: 212 VVSLETIVREALFEISKKGLGAVSVVDKNGILKGIITDGDIRRKIEIDDMFLKRRAEEVM 271

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            KNP  I E+ L T A+++L+   I++L VVD+  K +G++H  D+L+ GI+
Sbjct: 272 TKNPIYIYENRLATEALKILQDRKINLLPVVDEKLKVVGMIHLHDILKAGIV 323


>gi|294650978|ref|ZP_06728318.1| D-arabinose 5-phosphate isomerase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823079|gb|EFF81942.1| D-arabinose 5-phosphate isomerase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 325

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/320 (40%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L +    ++  +F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KSALETLRIEQQAIEVLAT----QVDERFDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVALTLGAADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VD+   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGAELPKVKPDTPMNKVLYEISDKRLGLTTIVDDQDIL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   +      T +V DVM +NP  I ++     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRMIDRQQGFDVTAAVSDVMTENPLTISQEARAVEALEKMHEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD +K IG++   DL+  G+
Sbjct: 305 DDAKKVIGVISMHDLIEAGV 324


>gi|304437445|ref|ZP_07397404.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369701|gb|EFM23367.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 326

 Score =  244 bits (623), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 139/330 (42%), Positives = 203/330 (61%), Gaps = 11/330 (3%)

Query: 19  MKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           M+ ST+ Q A+ ++  E   ++ L   +  +    F  A E I A KGRVV+TG+GKSGH
Sbjct: 1   MQESTIRQKAVETLKLEADAVARLTDRVDDD----FEAAAEAILACKGRVVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTADDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              ++A++   KS +   AD  + +  E E+CP GLAPT S    LA+GDALA+AL+ +R
Sbjct: 117 GARIVAMSGRRKSQLGRSADFYIDIGVEREACPLGLAPTASTTATLAMGDALAMALMAAR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG  L +  ++VMH+GD  P+V       DA+ ++++K  G V+V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGDENPVVPYHTTAKDALFVMTDKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD   L   VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDADGKFIGLVTDGIIRRALAKDYTFLDKDVESIMFATPLTIAPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+DD    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVIDDAGVPVGIVHLTDLLRQGVV 326


>gi|226951455|ref|ZP_03821919.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ATCC 27244]
 gi|226837803|gb|EEH70186.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ATCC 27244]
          Length = 325

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L +    ++  +F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KSALETLRIEQQAIEVLAT----QVDERFDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVALTLGLADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VDE   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGSELPKVKPDTPMNKVLYEISDKRLGLTTIVDEQDTL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   +      T  V DVM  NP  I ++     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRMIDRQQGFDVTAVVADVMTANPLTISQEARAVEALEKMHEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD +K IG++   DL+  G+
Sbjct: 305 DDAKKVIGVISMHDLIEAGV 324


>gi|157827303|ref|YP_001496367.1| KpsF [Rickettsia bellii OSU 85-389]
 gi|157802607|gb|ABV79330.1| KpsF [Rickettsia bellii OSU 85-389]
          Length = 319

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+    A R I +E   L  L   +  +    F+  VE + + KGRVV+TGIGKSG+I  
Sbjct: 5   NNYENVAKRVISSEASALKKLSEHIPED----FNRIVEFLLSFKGRVVLTGIGKSGYIAK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A++ +STG P+F++H AEASHGDLGMIT+DDL+I+LS SG + EL  I+ Y + FS+ 
Sbjct: 61  KIAASFSSTGMPAFYIHPAEASHGDLGMITKDDLVIMLSNSGETKELFNIIKYCKDFSVK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + A+T    S +A ++D +L +P+  E+   G APT S+++ L++GDAL   + E + F+
Sbjct: 121 IAAMTMNKNSTLAANSDFLLIVPEYSEASIIG-APTVSSLIMLSLGDALMTVIHEVKGFT 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ++DF   HPGG +G        +M SGD IPLV    P  + I ++++KR GC  V+D+ 
Sbjct: 180 KDDFKSYHPGGSIGANLTEIKHLMRSGDQIPLVHEDTPFAETILVMNKKRLGCTLVIDKA 239

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L G+IT+GD+ R+ +  ++  +  D+M KNP  I  +      + L++  NI+ L +V
Sbjct: 240 KNLVGVITDGDLRRHINDQIHLKTASDIMTKNPVYISSEIFAKEVLDLMKAKNITNLPIV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+    IGI H  DLLR G+
Sbjct: 300 DN-NTIIGITHIHDLLRAGV 318


>gi|332184342|gb|AEE26596.1| Arabinose 5-phosphate isomerase [Francisella cf. novicida 3523]
          Length = 323

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 204/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV-EKIKAIKGRVVITGIGKSGHIGSKL 82
           +  A+ +   E   L  L++S+  + +F+  C +  K    KGRV+ITG+GKSGHIG K+
Sbjct: 5   IYNAVETFRLEIETLEKLKNSI--DENFEKACEIILKNNRDKGRVIITGMGKSGHIGKKM 62

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +   IP+I
Sbjct: 63  AATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKYLDIPII 122

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+TS  KS++A ++D+ L L  + E+CP  LAPT+S    L +GDALA+ALL+++NFS  
Sbjct: 123 AMTSNPKSILAKNSDVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAVALLKAKNFSVK 182

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   ++ E  
Sbjct: 183 DFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGSTLII-ENS 241

Query: 262 KLKGIITEGDIFRNFH-KDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           KL GI T+GD+ R F  ++ N+  S+ +VM KNPK IL++ +   A++ + ++ I+ L V
Sbjct: 242 KLLGIFTDGDLRRMFEAENFNSQRSISEVMTKNPKTILKEEMAITALEKMEKYEITSLAV 301

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD     +GI+   DL++ G+
Sbjct: 302 VDHNHNILGIITMHDLIKLGL 322


>gi|157372595|ref|YP_001480584.1| D-arabinose 5-phosphate isomerase [Serratia proteamaculans 568]
 gi|157324359|gb|ABV43456.1| KpsF/GutQ family protein [Serratia proteamaculans 568]
          Length = 328

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 23  ERDGLAQLDQYINAD----FTRACELIAECTGKVVVMGMGKSGHIGCKIAATFASTGTPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++  D+++ +S SG S+E++A++   +R  IPLI +T+  +S + 
Sbjct: 79  FFVHPAEASHGDLGMVSAQDIVLAISNSGESNEIQALIPVLKRQQIPLICMTNNPESSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD IP V     L DA+  ++ K  G   + D+  K+ GI T+GD+
Sbjct: 199 GRRLLLRVSDIMHSGDEIPHVSADASLRDALLEITRKNLGMTVICDDLMKIAGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    +LN   + DVM      +  + L   A+ L++Q +I+ ++V D  Q  +G+V
Sbjct: 259 RRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITSVLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|170717636|ref|YP_001784716.1| KpsF/GutQ family protein [Haemophilus somnus 2336]
 gi|168825765|gb|ACA31136.1| KpsF/GutQ family protein [Haemophilus somnus 2336]
          Length = 311

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/313 (43%), Positives = 194/313 (61%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  S+ AE+  L+ L  +L      QF+  VE I   +GR+V+ GIGKSG IG K+ 
Sbjct: 4   LQIARNSLAAEQNALAKLSQNLNQ----QFNQVVELILNCEGRLVVGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A HAD +L +  E E+CP+ LAPTTSA++ LA+GDALA++L+ +RNF   D
Sbjct: 120 LTGNLNSTLAKHADYILDISVEREACPNNLAPTTSALVTLALGDALAVSLITARNFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M     +P V         +T+++E R G VA+V E + 
Sbjct: 180 FAKFHPGGSLGRRLLCRVKDQMQV--RLPKVTENTNFTGCLTVMNEGRMG-VALVMENEN 236

Query: 263 LKGIITEGDIFRNFHKD-LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           LKGIIT+GDI R    +  NTL+   +D+M  NPK I  +T L+ A   +++  I  L+V
Sbjct: 237 LKGIITDGDIRRALSANGTNTLNKIAKDLMTSNPKTINYNTYLSEAENFMKEKKIHSLVV 296

Query: 320 VDDCQKAIGIVHF 332
           VDD  K IG+V F
Sbjct: 297 VDDQNKVIGLVEF 309


>gi|294013117|ref|YP_003546577.1| arabinose-5-phosphate isomerase [Sphingobium japonicum UT26S]
 gi|292676447|dbj|BAI97965.1| arabinose-5-phosphate isomerase [Sphingobium japonicum UT26S]
          Length = 335

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 131/319 (41%), Positives = 196/319 (61%), Gaps = 5/319 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQG-ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           + A R++     GL++LE+     E S  F   V  I  ++GR+++TG+GKSG I  K+ 
Sbjct: 18  ETARRTLSIAAEGLNALENQFSDREFSANFLRLVGVIMNVRGRLIVTGMGKSGIIARKMT 77

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+H A+A HGDLGMIT DD++++LS SG S+EL  I+ Y +RF+IPL+ 
Sbjct: 78  ATLTSTGTPAIFLHPADAGHGDLGMITPDDVVLMLSHSGESNELGPIIQYCKRFAIPLLG 137

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S VA  +DI + +P   E+CP+ LAPTTS  +Q+A GDALAIAL+E R FS +D
Sbjct: 138 MTARPHSTVAASSDICILMPDVKEACPNSLAPTTSTTIQMAFGDALAIALMEMRGFSADD 197

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+  HP G+LG   V   ++M SG  +P V+    L+DA   ++  R G  AVV+   +L
Sbjct: 198 FHKFHPNGRLGAQLVKVRELMASGGDVPRVEEDASLLDATIEMTRARLGGTAVVNGKGEL 257

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G  T+GD+ R     + +N   V   M   P  +  + L + A++L+  HNI++L V +
Sbjct: 258 IGAFTDGDLRRTVTGTRHMNE-PVGRYMTVQPVSVSPEELASEALRLMHDHNITLLFVCE 316

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              + +G +H  DLL  G+
Sbjct: 317 K-DRLVGAIHMHDLLHAGV 334


>gi|239818252|ref|YP_002947162.1| KpsF/GutQ family protein [Variovorax paradoxus S110]
 gi|239804829|gb|ACS21896.1| KpsF/GutQ family protein [Variovorax paradoxus S110]
          Length = 332

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 141/319 (44%), Positives = 189/319 (59%), Gaps = 7/319 (2%)

Query: 30  SIIAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           +I+A  R    +ES     L+  +   F  AV KI  ++GRVV+ G+GKSGH+G K+A+T
Sbjct: 14  AILARARATFDIESDAVIGLKSRVGPSFVEAVRKILDVRGRVVVMGMGKSGHVGRKIAAT 73

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ FVH AEASHGDLGMI   DL++ +S SG  DEL  IL   +R  +PLIA+T
Sbjct: 74  LASTGTPAMFVHPAEASHGDLGMIKPVDLVLAISNSGEVDELTVILPVVKRQGVPLIAMT 133

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A HADIV+      E+CP  LAPT S   Q+A+GDALA+ALL++R F   DF 
Sbjct: 134 GRTDSTLARHADIVIDAGVAKEACPLNLAPTASTTAQMAMGDALAVALLDARGFGSEDFA 193

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    SDVM SGD +P V     L + +  +S K  G  AVVD   +  
Sbjct: 194 RSHPGGALGRKLLTHVSDVMRSGDEVPRVAPTATLSELMREMSSKGLGATAVVDAQGRAI 253

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R      DL  L+  DVM   P+ +  + L   A +L+ +H I+ +++VD 
Sbjct: 254 GIFTDGDLRRQVETGGDLRGLTAADVMHPGPRTLRAEALAVEAAELMEEHRITSVLIVDP 313

Query: 323 CQKAIGIVHFLDLLRFGII 341
               IG +   DL+R  +I
Sbjct: 314 EGLLIGALSINDLMRAKVI 332


>gi|152985777|ref|YP_001350366.1| hypothetical protein PSPA7_5030 [Pseudomonas aeruginosa PA7]
 gi|150960935|gb|ABR82960.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 324

 Score =  244 bits (622), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 200/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K+A
Sbjct: 8   IHSAQRTIGLERDAVDSLLARIGDD----FVRACELLLAGKGRVVVVGMGKSGHIGKKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFFVH AEASHGD+GMIT DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPSFFVHPAEASHGDMGMITEDDVVLALSNSGSTAEIVTLLPLIKRLGITLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVSLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH G+ +P V +G  L  A+  ++ K  G   V+DE  K
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHVGEELPQVLLGTSLTGALMEMTRKGLGMTVVLDEHGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+VV
Sbjct: 244 LAGIFTDGDLRRALDRGVDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G ++  DLLR G++
Sbjct: 304 DADDRPVGALNMHDLLRAGVM 324


>gi|300918959|ref|ZP_07135514.1| arabinose 5-phosphate isomerase [Escherichia coli MS 115-1]
 gi|300413901|gb|EFJ97211.1| arabinose 5-phosphate isomerase [Escherichia coli MS 115-1]
          Length = 328

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 199/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++ H+I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSHHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|258591075|emb|CBE67370.1| Arabinose 5-phosphate isomerase [NC10 bacterium 'Dutch sediment']
          Length = 319

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 126/297 (42%), Positives = 185/297 (62%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L  +F   VE ++  +GRVV+TG+GKSG +  K+AST+ASTGTP+FF+H AE  HGDLG
Sbjct: 23  KLDERFDRVVEILRDCRGRVVLTGMGKSGSVAQKIASTMASTGTPAFFLHPAEGGHGDLG 82

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+ R D++I +S SG +DEL  +L   +R  + LIA+  +  S +A  +D+ + +    E
Sbjct: 83  MLVRGDVVIAVSNSGETDELVGLLPAIKRLGLMLIALVGDPASTLARQSDVAIDVGVAKE 142

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S    LA+GDALA+ALLE R F+E DF +LHP G LG  L     D+M  
Sbjct: 143 ACPLALAPTASTTAALAMGDALAVALLEQRGFTEADFALLHPAGSLGRRLLWRVQDLMRV 202

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G+ +P+++    + +A+  +S KR G  AVVDE   + GIIT+GD+ R   +  DL    
Sbjct: 203 GEQLPIIRQDALMSEALAEISRKRLGMTAVVDETGIVIGIITDGDLRRALSQGVDLLQRQ 262

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             D M  +PK I  D L   A++++ +H I+ L++VD      G++H  DLLR G++
Sbjct: 263 ARDCMTPHPKTIDRDALAAKALEVMERHAITSLLIVDPKGNPEGVIHLHDLLRAGVV 319


>gi|326319549|ref|YP_004237221.1| KpsF/GutQ family protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323376385|gb|ADX48654.1| KpsF/GutQ family protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 339

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 132/292 (45%), Positives = 181/292 (61%), Gaps = 3/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   V ++ A  GRVV+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  
Sbjct: 48  FADVVHRVLATSGRVVVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTPG 107

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL++ +S SG S EL  +L   RR  +PL+A+T   +S +A HAD+VL    E E+CP  
Sbjct: 108 DLVLAISNSGESGELTVLLPVLRRLGVPLVAMTGGLESTLARHADLVLDCGVEREACPLN 167

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPTTS   QLA+GDALA+ALL++R F   DF   HPGG LG  L    SDVM SG  +P
Sbjct: 168 LAPTTSTTAQLAMGDALAVALLDARGFRSEDFARSHPGGALGRKLLTHVSDVMRSGTDVP 227

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVM 289
            V       + +  +S KR G  A+ D   ++ GI T+GD+ R      DL +++  +VM
Sbjct: 228 RVLPEASFSELMREMSAKRLGASAIADAQGRILGIFTDGDLRRRIEAGADLRSVTAGEVM 287

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              P+ I  D L   A +++ +H I+ ++V  +     G+VH  DL+R  +I
Sbjct: 288 HAAPRTIAPDALAADAAEMMERHAITSVLVASEGGVLAGVVHIGDLMRAKVI 339


>gi|251792555|ref|YP_003007281.1| arabinose 5-phosphate isomerase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533948|gb|ACS97194.1| arabinose 5-phosphate isomerase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 324

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/313 (42%), Positives = 195/313 (62%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E++ L  L      +L   F   VE I A +GR+VI GIGKSG +G K+ 
Sbjct: 17  LQIARETLSVEEKALGQLNQ----KLDRTFADVVELILACEGRLVIGGIGKSGLVGKKMV 72

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 73  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKIIA 132

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTS ++ +A+GDALA+ L+ +R+F   D
Sbjct: 133 LTSNKNSTLARHADYVLDISVEREVCPNNLAPTTSVVVTMALGDALAVCLMRARDFQPED 192

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+  +     D +TI++E R G VA+V E Q+
Sbjct: 193 FAKFHPGGSLGRRLLCRVKDQMQT--RLPIAALTTSFTDCLTIMNEGRMG-VALVMEQQQ 249

Query: 263 LKGIITEGDIFRNFHKD-LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L+GIIT+GDI R    +  NTLS   +++M  +PK I +DT L+ A   ++ H I  L+V
Sbjct: 250 LRGIITDGDIRRALTANGANTLSKTAQELMTSHPKTIHQDTYLSEAENYMKAHKIHSLVV 309

Query: 320 VDDCQKAIGIVHF 332
           VDD Q  +G+V F
Sbjct: 310 VDDAQNVVGLVEF 322


>gi|188025683|ref|ZP_02959448.2| hypothetical protein PROSTU_01304 [Providencia stuartii ATCC 25827]
 gi|188022727|gb|EDU60767.1| hypothetical protein PROSTU_01304 [Providencia stuartii ATCC 25827]
          Length = 326

 Score =  243 bits (621), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 193/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL +LE  +  +    F  A ++I A +G+VV+ G+GKSGHIG K+A+TLASTGTPS
Sbjct: 21  ESEGLKNLEQYINDD----FTHACQRIFACQGKVVVMGMGKSGHIGRKIAATLASTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R  +PLI +T+   S + 
Sbjct: 77  FFVHPGEASHGDLGMITNKDIVLAISNSGESSEILALLPVLKRIKVPLICMTNNPNSSMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +ADI L +    E+CP GLAPTTS    L +GDALAIALL +R F+  DF + HPGG L
Sbjct: 137 KYADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLTARGFTPEDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+M+ GD IP +     L +A+  ++ K+ G   + D+   + GI T+GD+
Sbjct: 197 GRKLLLLVRDLMNVGDDIPHIPQTATLREALIEITRKKLGMTVICDDEMNIAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    + ++ L   A+ L++  +I+ LMV +   K +G++
Sbjct: 257 RRIFDMGIDLNNAKIADVMTRGGIRVSQNMLAVEALNLMQSKHITSLMVAEG-NKLVGVL 315

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 316 HMHDLLQAGVV 326


>gi|238022464|ref|ZP_04602890.1| hypothetical protein GCWU000324_02372 [Kingella oralis ATCC 51147]
 gi|237867078|gb|EEP68120.1| hypothetical protein GCWU000324_02372 [Kingella oralis ATCC 51147]
          Length = 322

 Score =  243 bits (621), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 193/307 (62%), Gaps = 7/307 (2%)

Query: 42  ESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           E++  GE+S      F  A E + A +GRV++TG+GKSGHIG K+A+TLASTGTP+FFVH
Sbjct: 16  EAAAIGEVSAGLGADFVRAAEAVLACRGRVIVTGMGKSGHIGRKMAATLASTGTPAFFVH 75

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            AEA+HGDLGMI   D+++ LS SG SDE+ AIL   +R    LI ++S  +S +A  AD
Sbjct: 76  PAEAAHGDLGMIVDGDVVLALSNSGESDEILAILPALKRKDTVLIGVSSNAQSSLARFAD 135

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           I +      E+CP  LAPT+S    LA+GDALAI LL++R F+  DF + HP G LG  L
Sbjct: 136 IHIRAAVSHEACPLNLAPTSSTTAVLALGDALAIVLLQARRFTSEDFALSHPAGSLGRRL 195

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +   D+MHSG  +P V     L  AI  +SEK  G +AVVD    LKG++T+GD+ R F
Sbjct: 196 LLTVGDLMHSGAELPAVAERTLLKSAIVTMSEKGLGMLAVVDVSGCLKGVLTDGDLRRLF 255

Query: 277 HK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      L+V DVM + PK I  D L + A++++++  I  L+V D+    +G ++  D
Sbjct: 256 EQRDSFAGLTVNDVMKREPKFIAPDKLASEALRMMQEKRIGGLLVCDEGMHLVGALNMHD 315

Query: 335 LLRFGII 341
           LL+  ++
Sbjct: 316 LLKARVV 322


>gi|237730117|ref|ZP_04560598.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
 gi|226908723|gb|EEH94641.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
          Length = 335

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 199/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+ GL+ L+  +    +  F  A EKI +  G+VV+ G+GKSGHIG K+A
Sbjct: 20  QQAGKEVLAIEREGLAELDQYI----NHNFTLACEKIFSCPGKVVVMGMGKSGHIGRKMA 75

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM++  D++I +S SG S+E+ A++   +R  +PLI 
Sbjct: 76  ATFASTGTPSFFVHPGEAAHGDLGMVSPQDVVIAISNSGESNEIAALIPVLKRLHVPLIC 135

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 136 MTGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 195

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K
Sbjct: 196 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVTKNASLRDALIEITRKNLGMTVICDDAMK 255

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 256 IDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVMVA 315

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D  Q  +G++H  DLLR G++
Sbjct: 316 DGDQ-LLGVLHMHDLLRAGVV 335


>gi|322418947|ref|YP_004198170.1| KpsF/GutQ family protein [Geobacter sp. M18]
 gi|320125334|gb|ADW12894.1| KpsF/GutQ family protein [Geobacter sp. M18]
          Length = 321

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 142/322 (44%), Positives = 192/322 (59%), Gaps = 9/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R I  E   L +LESS+       F  AVE I    GRVV+TG+GKSG IG K+A
Sbjct: 3   LEEAKRVIRVEAEALLNLESSID----RTFEKAVEMILNTSGRVVVTGMGKSGLIGQKIA 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LIA
Sbjct: 59  STMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVRILPIIKRLGASLIA 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F   D
Sbjct: 119 MAGNPNSTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKAED 178

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   D+MHSGD +PLV     + +A+  ++ K  G   V      
Sbjct: 179 FAMFHPGGALGRRLLLKVEDIMHSGDGLPLVSSDTLMREALFTITSKGLGITGVTSADGA 238

Query: 263 LKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+IT+GD+ R   + L+ +S+    +M K PK I  D L   A+Q + Q++I+ L V 
Sbjct: 239 LIGVITDGDLRRALGQGLDIISLPASALMKKGPKRIRRDELAARALQQMEQYSITSLFVF 298

Query: 321 DDCQ--KAIGIVHFLDLLRFGI 340
            D Q    +GIVH  DLL+ GI
Sbjct: 299 ADDQAPAPVGIVHLHDLLKAGI 320


>gi|121596413|ref|YP_988309.1| KpsF/GutQ family protein [Acidovorax sp. JS42]
 gi|120608493|gb|ABM44233.1| KpsF/GutQ family protein [Acidovorax sp. JS42]
          Length = 333

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 135/297 (45%), Positives = 181/297 (60%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F   V+++ A  GRVV+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLG
Sbjct: 37  RLGGGFVQVVQRVLATTGRVVVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLG 96

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+T  DL++ LS SG S E+  +L   +R  +PLIA+T   +S +A HAD+VL    + E
Sbjct: 97  MVTNGDLVLALSNSGESSEITVLLPVLKRLGVPLIAMTGGLQSTLARHADLVLDCSVQRE 156

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPTTS   QLA+GDALA+ALL++R F   DF   HPGG LG  L     DVM +
Sbjct: 157 ACPLNLAPTTSTTAQLAMGDALAVALLDARGFRPEDFARSHPGGALGRKLLTHVRDVMRA 216

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G  +P V         +  +S K  G  AVVD+  +  GI T+GD+ R      DL    
Sbjct: 217 GADVPHVPPHANFSTLMREMSAKGVGATAVVDDAGRPVGIFTDGDLRRRIEAGLDLRETR 276

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +DVM  +P+ I  D L   A Q +  H+I+ ++V DD    +G+VH  DL+R  +I
Sbjct: 277 AQDVMHASPRTIAADALAADAAQAMEHHSITSVLVTDDDGVLVGVVHIGDLMRAKVI 333


>gi|259907016|ref|YP_002647372.1| D-arabinose 5-phosphate isomerase [Erwinia pyrifoliae Ep1/96]
 gi|224962638|emb|CAX54093.1| Putative isomerase [Erwinia pyrifoliae Ep1/96]
 gi|283476811|emb|CAY72649.1| putative isomerase [Erwinia pyrifoliae DSM 12163]
          Length = 328

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   C  + I   +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLEQLDRYINDD--FTHTC--DLIYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI ITS  +S + 
Sbjct: 79  FFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICITSRPESAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH G+++P V     L DA+  +++K  G   + D   +++GI T+GD+
Sbjct: 199 GRKLLLRVDDIMHCGNAMPHVSRDASLRDALLEITQKNMGMTVICDASMQIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV D+  + IG++
Sbjct: 259 RRVFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVADN-DRLIGVI 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|193213812|ref|YP_001995011.1| KpsF/GutQ family protein [Chloroherpeton thalassium ATCC 35110]
 gi|193087289|gb|ACF12564.1| KpsF/GutQ family protein [Chloroherpeton thalassium ATCC 35110]
          Length = 333

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 203/321 (63%), Gaps = 8/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++++ E + L ++ +     L  QF+ AV  I    G+V+ITG+GKSG I  K+A
Sbjct: 17  IDLARQTLLLESKALEAVST----RLDEQFNAAVRLILNATGKVIITGMGKSGIIAQKIA 72

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ STGTP+ F+H +EA+HGDLG++++ D++I LS SG+++EL  IL   ++  + +IA
Sbjct: 73  ATMTSTGTPAVFMHPSEAAHGDLGVVSKGDVVIGLSKSGTTEELLYILPALKQLQVQIIA 132

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +    +S +A  AD VL +  E E+CP+ LAPTTS    LA+GDALA+AL++++ FS+ D
Sbjct: 133 MVGNVRSALALRADAVLDVAVEKEACPYDLAPTTSTTAMLAMGDALAMALMQAKKFSQYD 192

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQ 261
           F V HP G LG  L +  +D+M + + +P+++        +  ++ KRFG   VVD E  
Sbjct: 193 FAVTHPSGALGKRLTMRVADIMATRERLPIIQDTVSFTGLLLEMTSKRFGAAIVVDGETG 252

Query: 262 KLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           KL G  T+GD+ R     KDL+ LS +DVM  NPK + ++TL    ++ +  H I+ +++
Sbjct: 253 KLVGFFTDGDLRRIVQTGKDLSRLSAKDVMTPNPKYLTKETLAKDCLETMEAHRITQMII 312

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
            DD QK IGIVH  DL+  G+
Sbjct: 313 CDDAQKPIGIVHIHDLVSLGL 333


>gi|93006318|ref|YP_580755.1| KpsF/GutQ family protein [Psychrobacter cryohalolentis K5]
 gi|92393996|gb|ABE75271.1| KpsF/GutQ family protein [Psychrobacter cryohalolentis K5]
          Length = 330

 Score =  243 bits (620), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 203/321 (63%), Gaps = 9/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A+ +I  EK  L+ L      ++  +F  A + I A +GRVV+TG+GKSG IG K+A
Sbjct: 14  ISTAIDAINTEKAALALLTE----QIDDRFAQACDIILACQGRVVVTGMGKSGLIGRKIA 69

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+ + D+++ +S SG SDE+K +L   +  +IPLI+
Sbjct: 70  ATFASTGTPSFFMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKMLLPVVKHLNIPLIS 129

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           I+ + + ++   ADI+LTL K  E+CP  LAPT+S    LA+GDALA+AL+ +RNF+  D
Sbjct: 130 ISRDKRGMLPHAADIILTLGKSQEACPLNLAPTSSTTATLALGDALAVALVHARNFTSED 189

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           F + HP G LG  L     D+MH+  + +PL+    PL +A+ I+S  R G   V D  +
Sbjct: 190 FALSHPAGALGRQLLTRVEDLMHTKTEDLPLINQQAPLQEALFIMSAGRLGMTVVTDAEK 249

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           K+ GI T+GD+ R   K  DL T  + ++M+ +P+ I +    + A+ ++ ++ IS L++
Sbjct: 250 KVVGIFTDGDLRRGLEKGIDLQT-PMRELMVSSPRRISKSMRASDALSVMNENAISQLLI 308

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           +DD Q+   I+   DLL+ G+
Sbjct: 309 IDDDQRLEAIITVHDLLQAGV 329


>gi|260886821|ref|ZP_05898084.1| arabinose 5-phosphate isomerase [Selenomonas sputigena ATCC 35185]
 gi|260863420|gb|EEX77920.1| arabinose 5-phosphate isomerase [Selenomonas sputigena ATCC 35185]
          Length = 377

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/335 (40%), Positives = 200/335 (59%), Gaps = 11/335 (3%)

Query: 14  KGHSLMKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           KG   MK   + + A+ ++  E   +  L  S+  E    F  AVE +     R+V+TG+
Sbjct: 47  KGEQRMKRDVIWEKAVETLSMEAAAVKKLTESVDEE----FCRAVECVLDCTARIVVTGM 102

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGH+G K+A+TLASTGTPSFF+H AEA HGDLGM+T  D+++ +S SG   E+  IL 
Sbjct: 103 GKSGHVGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAISNSGEVQEVVKILP 162

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              R    +IA+T    S +A ++D V+ +  EPE+CP GLAPTTS    LA+GDA+A+A
Sbjct: 163 VIHRIGATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTSTTATLAMGDAIAVA 222

Query: 193 LLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           ++  RNF + DF + HPGG LG  L +   DVMH+G+  P+V       DA+ +++EK  
Sbjct: 223 VMSVRNFKKQDFALFHPGGALGRRLLLKVQDVMHTGEENPVVSGEKTAKDALFVMTEKGL 282

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLL 309
           G V+V D   +  G++T+G I R   KD   L   V ++M   P  I  D L T A+ ++
Sbjct: 283 GAVSVTDAAGRFIGLLTDGIIRRALAKDYAFLDEPVHEIMFTEPLTIHADELATAALSVM 342

Query: 310 RQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +H    ++VL V+D+    +G++H  DLL+ G++
Sbjct: 343 EKHEPRPVTVLPVIDEKGAPVGMIHLTDLLKQGVV 377


>gi|307293719|ref|ZP_07573563.1| KpsF/GutQ family protein [Sphingobium chlorophenolicum L-1]
 gi|306879870|gb|EFN11087.1| KpsF/GutQ family protein [Sphingobium chlorophenolicum L-1]
          Length = 335

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 130/319 (40%), Positives = 195/319 (61%), Gaps = 5/319 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQG-ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           + A R++     GL++LE+     E S  F   V  I  ++GR+++TGIGKSG +  K+ 
Sbjct: 18  ETARRTLSIAAEGLNALEAKFADREFSAHFLRMVGVIMNVRGRLIVTGIGKSGIVARKMT 77

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+H A+A HGDLGM+T DD++++LS SG S EL  I+ Y +RF+IPL+ 
Sbjct: 78  ATLTSTGTPAIFLHPADAGHGDLGMVTPDDVVLMLSHSGESSELGPIIQYCKRFAIPLLG 137

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S VA  +DI + +P   E+CP+ LAPTTS  +Q+A GDALAI+L+E R FS +D
Sbjct: 138 MTARPHSTVAAASDICILMPNVKEACPNALAPTTSTTIQMAFGDALAISLMEMRGFSADD 197

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+  HP G+LG   V   ++M SGD +P V+    L+DA   ++  R G  AVV+    L
Sbjct: 198 FHKFHPNGRLGAQLVKVRELMASGDDVPRVEEDASLLDATIEMTRARLGGTAVVNGEGAL 257

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G  T+GD+ R     + +N   V   M   P  +  + L + A++L+  HNI++L V +
Sbjct: 258 IGAFTDGDLRRTVTGTRHMNE-PVGRYMTVEPLSVGPEELASEALRLMHDHNITLLFVCE 316

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              + +G +H  DLL  G+
Sbjct: 317 K-DRLVGALHMHDLLHAGV 334


>gi|118579405|ref|YP_900655.1| KpsF/GutQ family protein [Pelobacter propionicus DSM 2379]
 gi|118502115|gb|ABK98597.1| KpsF/GutQ family protein [Pelobacter propionicus DSM 2379]
          Length = 321

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 191/322 (59%), Gaps = 9/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V+ A R I  E   L ++   + G     F  AV  I    GRVV++G+GKSG +G K+A
Sbjct: 3   VEEARRVIRVEAEALLAMAERING----AFEQAVRMILDCTGRVVVSGMGKSGLVGQKIA 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST+ASTGTP+ F+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    LI 
Sbjct: 59  STMASTGTPALFLHPAEGIHGDLGMIMKGDVVIAISNSGETEEMLRILPIIKRLGARLIG 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++    S +A  +D+ L +  + E+CP GLAPT S    LA+GDALA+ALL  R F   D
Sbjct: 119 MSGNAASTLARGSDLFLDVSVKEEACPLGLAPTASTTATLAMGDALAVALLIQRGFRAED 178

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  LF+   D+MHSGD IP+V     + D + ++S KR G   V  +  +
Sbjct: 179 FALFHPGGALGKKLFLRVEDLMHSGDEIPMVSAQAVMRDVLFVISAKRLGVTGVAGDNGE 238

Query: 263 LKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L+G+IT+GD+ R   K  + L    E +M  NPK I    L   A++L+ Q++I+ L V 
Sbjct: 239 LRGVITDGDLRRALEKGYDILEREAEAIMRLNPKRISRHELAAAALRLMEQYSITSLFVF 298

Query: 321 DDCQKAI--GIVHFLDLLRFGI 340
           DD   ++  GIVH  D+LR GI
Sbjct: 299 DDDTSSVPCGIVHLHDILRSGI 320


>gi|89902984|ref|YP_525455.1| KpsF/GutQ family protein [Rhodoferax ferrireducens T118]
 gi|89347721|gb|ABD71924.1| KpsF/GutQ family protein [Rhodoferax ferrireducens T118]
          Length = 333

 Score =  243 bits (619), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 136/300 (45%), Positives = 181/300 (60%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  L   F   V  +  ++GRVV+ G+GKSGHIG K+A+TLASTGTP+ FVH AEASHG
Sbjct: 34  LKQNLGESFARVVTMVLDVRGRVVVMGMGKSGHIGRKIAATLASTGTPAMFVHPAEASHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   DL++ +S SG S+EL AIL   +R   PLIA+T    S +A HAD+ L    
Sbjct: 94  DLGMIKSVDLVLAISNSGESEELTAILPVLKRLGAPLIAMTGHAGSTLARHADVFLDCGV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAPT S   QLA+GDALA+ALL++R F   DF   HPGG LG  L    SDV
Sbjct: 154 EKEACPLNLAPTASTTAQLALGDALAVALLDARGFKAEDFARSHPGGALGRKLLTHVSDV 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M SGD++P V       D +  +S K  G  AVVD+   + GI T+GD+ R   +  DL 
Sbjct: 214 MRSGDAVPHVGPHASFSDLMREMSVKGLGATAVVDDHMNVLGIFTDGDLRRLVEQGIDLR 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + +  +VM  NP  I  D L   A +++    I+ ++VVD   +  G ++  DL+R  +I
Sbjct: 274 STTAAEVMHPNPSTIARDALAVEAAEMMELRCITSVLVVDASGQLCGALNSNDLMRAKVI 333


>gi|288942540|ref|YP_003444780.1| KpsF/GutQ family protein [Allochromatium vinosum DSM 180]
 gi|288897912|gb|ADC63748.1| KpsF/GutQ family protein [Allochromatium vinosum DSM 180]
          Length = 339

 Score =  243 bits (619), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 188/306 (61%), Gaps = 3/306 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +S  ++L   L   F  A   + A  GR+V+ G+GKSGHIG K+A+TLASTG+P+FFVH 
Sbjct: 34  ASAVAALAERLDDAFVAACGHMLACDGRIVVLGMGKSGHIGGKIAATLASTGSPAFFVHP 93

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            EASHGDLGMIT  D+++ +S SG + EL  IL   +R  +PLIA+T   +S +A  AD+
Sbjct: 94  GEASHGDLGMITPRDVVLAISNSGETAELLTILPLIKRLGVPLIAMTGRRESTLAHEADV 153

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLF 217
            L +    E+CP GLAPT+S    LA+GDALAIALLESR F+  DF   HP G LG  L 
Sbjct: 154 HLDISVATEACPLGLAPTSSTTAALAMGDALAIALLESRGFTAEDFARSHPAGTLGRRLL 213

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   DVMH G+ +P V +G  L+D +  +S K  G  AVV+    L G+ T+GD+ R   
Sbjct: 214 LHVDDVMHQGERLPWVALGTSLLDTLEEISRKGLGMSAVVNPDGTLAGVFTDGDLRRALD 273

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D++  S++ VM +    I    L   A++L+    I+ L+VVD   + IG ++  DL
Sbjct: 274 QGIDVHHTSIDTVMTRQCATIQSGALAVEAVRLMESRAINGLLVVDTGGRLIGALNMHDL 333

Query: 336 LRFGII 341
           LR G++
Sbjct: 334 LRAGVV 339


>gi|222112651|ref|YP_002554915.1| kpsf/gutq family protein [Acidovorax ebreus TPSY]
 gi|221732095|gb|ACM34915.1| KpsF/GutQ family protein [Acidovorax ebreus TPSY]
          Length = 333

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/297 (45%), Positives = 181/297 (60%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F   V+++ A  GRVV+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLG
Sbjct: 37  RLGGGFVQVVQRVLATTGRVVVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLG 96

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+T  DL++ LS SG S E+  +L   +R  +PLIA+T   +S +A HAD+VL    + E
Sbjct: 97  MVTNGDLVLALSNSGESSEITVLLPVLKRLGVPLIAMTGGLQSTLARHADLVLDCSVQRE 156

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPTTS   QLA+GDALA+ALL++R F   DF   HPGG LG  L     DVM +
Sbjct: 157 ACPLNLAPTTSTTAQLAMGDALAVALLDARGFCPEDFARSHPGGALGRKLLTHVRDVMRA 216

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G  +P V         +  +S K  G  AVVD+  +  GI T+GD+ R      DL    
Sbjct: 217 GADVPHVPPHANFSTLMREMSAKGVGATAVVDDAGRPVGIFTDGDLRRRIEAGVDLRETR 276

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +DVM  +P+ I  D L   A Q +  H+I+ ++V DD    +G+VH  DL+R  +I
Sbjct: 277 AQDVMHASPRTIAADALAADAAQAMEHHSITSVLVTDDDGVLVGVVHIGDLMRAKVI 333


>gi|254447270|ref|ZP_05060737.1| D-arabinose 5-phosphate isomerase [gamma proteobacterium HTCC5015]
 gi|198263409|gb|EDY87687.1| D-arabinose 5-phosphate isomerase [gamma proteobacterium HTCC5015]
          Length = 324

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 129/294 (43%), Positives = 189/294 (64%), Gaps = 4/294 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A E + A +GRV++TG+GKSGHIGSK+A+TLASTGTP+FFVH  EASHGDLGMIT 
Sbjct: 31  DFVRACEIMIACEGRVIVTGMGKSGHIGSKIAATLASTGTPAFFVHPGEASHGDLGMITN 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S SG + E+  IL   +R  +PLIA+T   KS ++  A++ + +  E E+CP 
Sbjct: 91  RDVVLAISNSGETHEIVTILPLIKRLGVPLIAMTGNPKSKLSEMAEVHIDISVEQEACPL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG-DS 229
            LAPT S    L +GDALA+ALLESR F+ +DF + HPGG LG  L +  SD+MH   + 
Sbjct: 151 NLAPTASTTATLVMGDALAVALLESRGFTASDFALSHPGGALGRRLLLHVSDIMHQQEEE 210

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVED 287
           IP V       +A+  +S K  G  AVVD   +L+GI T+GD+ R   +DL+    ++ +
Sbjct: 211 IPRVLDNATFGEALVEMSTKGLGMTAVVDADNRLQGIFTDGDLRRTLDRDLDLKATTIAE 270

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           VM +NP  I  + L   A++++ +  I+ L ++ +  K +G ++  DLLR G++
Sbjct: 271 VMTRNPISIHPEMLAAEALKIMDERKINALAIIGEDDKVVGAINMHDLLRAGVM 324


>gi|307544518|ref|YP_003896997.1| KpsF/GutQ family protein [Halomonas elongata DSM 2581]
 gi|307216542|emb|CBV41812.1| KpsF/GutQ family protein [Halomonas elongata DSM 2581]
          Length = 328

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 147/318 (46%), Positives = 198/318 (62%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A+R++  E++ + +L       +   F  A E I A  GRVV+TG+GKSGHIG K+A+TL
Sbjct: 15  AIRTLTLEQQAIGALIE----HIDEGFERACELILACSGRVVVTGMGKSGHIGGKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG + E+ A+L   +R   PLI++T 
Sbjct: 71  ASTGTPAFFVHPGEASHGDLGMITPGDVVLALSHSGETAEVTALLPLLKRLGTPLISMTG 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +  HAD  L    E E+CP  LAPT+S    LA+GDALA+ALLESR F+  DF +
Sbjct: 131 RPASTLGRHADAHLYAGVEREACPLDLAPTSSTTAALALGDALAVALLESRGFTAEDFAL 190

Query: 207 LHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  SD+MH GD +P V  G PL DA+  ++ +  G   VVD   +L G
Sbjct: 191 SHPGGSLGKRLLLRVSDLMHQGDRLPRVASGSPLRDALLEITRQGLGFTCVVDPDDRLVG 250

Query: 266 IITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           + T+GD+ R    H DL+ L V+DVM    K I  DTL   A++++  + I+ L VVDD 
Sbjct: 251 VYTDGDLRRTLDQHADLSGLKVDDVMTAPGKRISPDTLAAEAVRIMEDNRITALAVVDDE 310

Query: 324 QKAIGIVHFLDLLRFGII 341
              +G +H  DLL  G+I
Sbjct: 311 GHPVGALHMHDLLASGVI 328


>gi|262369713|ref|ZP_06063041.1| arabinose 5-phosphate isomerase [Acinetobacter johnsonii SH046]
 gi|262315781|gb|EEY96820.1| arabinose 5-phosphate isomerase [Acinetobacter johnsonii SH046]
          Length = 325

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 10/321 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ LS L      ++  +F  A E I   KGR+VITG+GKSGHIG K+A+
Sbjct: 9   KVALETLEIERQALSVLAK----QIDDRFSRACEIILKCKGRLVITGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+   D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKYLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++++ +  +AD+ LTL    E+CP GLAPT+S    LA+GDALA+ALL++R F+ +DF
Sbjct: 125 SGDDRAPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARGFTSDDF 184

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+GD +P V     +   +  +S KR G   +VD+   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTAMNKVLYEISNKRLGLTTIVDDNDHL 244

Query: 264 KGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            GI T+GD+ R   K    D+N L+V DVMIK+P  I  +     A++ + +  I+  +V
Sbjct: 245 LGIFTDGDLRRLIDKQQGFDVN-LAVSDVMIKSPLTISPEARAVEALERMNEKKINQFVV 303

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD+  K IG++   DL++ G+
Sbjct: 304 VDESNKVIGVLSMHDLIQAGV 324


>gi|260846010|ref|YP_003223788.1| D-arabinose 5-phosphate isomerase [Escherichia coli O103:H2 str.
           12009]
 gi|257761157|dbj|BAI32654.1| D-arabinose 5-phosphate isomerase [Escherichia coli O103:H2 str.
           12009]
          Length = 328

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ LE  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELEQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|332140250|ref|YP_004425988.1| arabinose 5-phosphate isomerase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550272|gb|AEA96990.1| arabinose 5-phosphate isomerase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 326

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 128/321 (39%), Positives = 200/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R I  E + +++L   L  +    F  A + + A +G+VV+ G+GKSGHIG+K+A
Sbjct: 10  IDSAKRVIEIETQAIANLSERLNDD----FITACDILFACQGKVVVCGMGKSGHIGNKIA 65

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FF+H  EA+HGDLGM+ + D+++ +S SG ++EL  +L   +R  IP++A
Sbjct: 66  ATLASTGTPAFFMHPGEANHGDLGMLGKGDVLLAISNSGETNELVNLLPVVKRLGIPVVA 125

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S +  HAD++L +  E E+C  GLAPTTS    L +GDALA+ALL+ + F+ +D
Sbjct: 126 MTNSASSSLGQHADVILDISVEKEACSLGLAPTTSTTATLVMGDALAVALLDQKGFTSDD 185

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   D+M +G  IPL+++   + DA+  +S+K  G   V+D    
Sbjct: 186 FALSHPGGSLGRKLLLKVRDIMLTGSDIPLIELNASVADALLEISKKGLGMTGVLDTDGT 245

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R  +   D+++ +VE VM K  K    + L   A+ L+  H IS LMV 
Sbjct: 246 LTGVFTDGDLRRILDARIDVHSATVESVMTKGGKTTTAEQLAVEALNLMETHKISALMVT 305

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+  K +G  +   LL+ G++
Sbjct: 306 DNEHKPVGAFNMHMLLKAGVL 326


>gi|319796638|ref|YP_004158278.1| kpsf/gutq family protein [Variovorax paradoxus EPS]
 gi|315599101|gb|ADU40167.1| KpsF/GutQ family protein [Variovorax paradoxus EPS]
          Length = 333

 Score =  242 bits (618), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 135/300 (45%), Positives = 175/300 (58%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  +   F  AV KI  ++GRVV+ G+GKSGH+G K+A+TLASTGTP+ FVH AEASHG
Sbjct: 34  LKTRVGPSFVDAVRKILEVRGRVVVMGMGKSGHVGRKIAATLASTGTPAMFVHPAEASHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   DL++ +S SG  +EL  IL   +R  +PLIAIT    S +  HADI L    
Sbjct: 94  DLGMIKAVDLVLAISNSGEVEELTVILPVVKRQGVPLIAITGRADSTLGRHADITLDAGV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT S   Q+A+GDALA+ALL++R F   DF   HPGG LG  L    SDV
Sbjct: 154 SKEACPLNLAPTASTTAQMAMGDALAVALLDARGFGSEDFARSHPGGALGRKLLTHVSDV 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLN 281
           M S   +P V     L + +  +S K  G  AVVD   +  GI T+GD+ R      DL 
Sbjct: 214 MRSDAEVPRVAPTATLSELMREMSSKGLGATAVVDAEGRAIGIFTDGDLRRKVETGADLR 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+  DVM   P+ +  D L   A  L+  H I+ ++VVD     IG +   DL+R  +I
Sbjct: 274 ALTAADVMHPGPRTLRADALAVEAADLMENHRITSVLVVDAAGLLIGALSINDLMRAKVI 333


>gi|304321243|ref|YP_003854886.1| arabinose 5-phosphate isomerase [Parvularcula bermudensis HTCC2503]
 gi|303300145|gb|ADM09744.1| arabinose 5-phosphate isomerase [Parvularcula bermudensis HTCC2503]
          Length = 327

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/318 (42%), Positives = 198/318 (62%), Gaps = 9/318 (2%)

Query: 32  IAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           IA  R + + E+    +L  +L   F  AV  + A  G  V+TG+GKSGHIG K+A+T A
Sbjct: 11  IATGRAVLTTEANALHTLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGRKMAATFA 70

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPSFFVH  EASHGDLGM+    ++I +S SG + EL+ IL YA R  +PLIA+T+ 
Sbjct: 71  STGTPSFFVHPTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVPLIAMTAR 130

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  A++ L LP+ PE+CP+GLAPT+S  M LA+GDALA+A + +R FS+ DF   
Sbjct: 131 PDSFLAKRAEVTLLLPRTPEACPNGLAPTSSTTMTLALGDALAVAAMTARGFSKEDFGAR 190

Query: 208 HPGGKLGTLFVCASDV--MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           HPGG+LG       +   + +G +IP +    PL D +  +SE R G VAVVD    L+G
Sbjct: 191 HPGGRLGMQLQRIEEYLGLQAGRTIPTLPSAAPLTDVLQKISEGRVGAVAVVDAAGLLEG 250

Query: 266 IITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+GD+ R    + D+ +L+  D+M ++P  I     ++ A+++     IS ++V+ + 
Sbjct: 251 IVTDGDVRRGIMGYTDVQSLTAADLMSRSPITIAPHQRVSSAVEIFETRAISQILVIAEG 310

Query: 324 QKAIGIVHFLDLLRFGII 341
           Q  IG+VH  DL+  G +
Sbjct: 311 QP-IGVVHIKDLMADGYL 327


>gi|331684844|ref|ZP_08385436.1| arabinose 5-phosphate isomerase [Escherichia coli H299]
 gi|331078459|gb|EGI49665.1| arabinose 5-phosphate isomerase [Escherichia coli H299]
          Length = 328

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   KS +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPKSSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|194434493|ref|ZP_03066753.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1012]
 gi|194417272|gb|EDX33381.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1012]
 gi|320181472|gb|EFW56390.1| Arabinose 5-phosphate isomerase [Shigella boydii ATCC 9905]
 gi|332086519|gb|EGI91666.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 155-74]
          Length = 328

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +KGI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IKGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|310766228|gb|ADP11178.1| D-arabinose 5-phosphate isomerase [Erwinia sp. Ejp617]
          Length = 328

 Score =  242 bits (618), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   C  + I   +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLEQLDRYINDD--FTHTC--DLIYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI ITS  +S + 
Sbjct: 79  FFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICITSRPESAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH G+++P V     L DA+  +++K  G   + D   +++GI T+GD+
Sbjct: 199 GRKLLLRVDDIMHCGNAMPHVSRDASLRDALLEITQKNMGMTVICDASMQIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV D+  + +G++
Sbjct: 259 RRVFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVADN-DRLLGVI 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|15838014|ref|NP_298702.1| polysialic acid capsule expression protein [Xylella fastidiosa
           9a5c]
 gi|9106425|gb|AAF84222.1|AE003972_7 polysialic acid capsule expression protein [Xylella fastidiosa
           9a5c]
          Length = 333

 Score =  242 bits (617), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 135/329 (41%), Positives = 197/329 (59%), Gaps = 6/329 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+ + ++ +  + R +I  +R   +L   L   +   F  A   I    GRV+ TG+GKS
Sbjct: 8   HNHLSDTALIASARRVIEIEREALTL---LNERIGTPFVAACRLILNSHGRVISTGMGKS 64

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +
Sbjct: 65  GHIARKIAATFASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLK 124

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL+
Sbjct: 125 RQGNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLD 184

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            R F+  DF   HP G LG  L +  +DVMHSG+ +P V     L +A+  ++ KR G  
Sbjct: 185 VRGFTAEDFARSHPAGHLGRRLLLHITDVMHSGNDLPAVHEEATLSEALLEMTRKRLGMT 244

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  +
Sbjct: 245 AIVDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEAN 304

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD  Q+A+G ++  DLL   I+
Sbjct: 305 KINGLIVVDPQQRAVGALNIHDLLHAKIV 333


>gi|255658896|ref|ZP_05404305.1| arabinose 5-phosphate isomerase [Mitsuokella multacida DSM 20544]
 gi|260848845|gb|EEX68852.1| arabinose 5-phosphate isomerase [Mitsuokella multacida DSM 20544]
          Length = 323

 Score =  242 bits (617), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 130/304 (42%), Positives = 188/304 (61%), Gaps = 6/304 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+  +  +F  AV  I     RVV+TG+GKSGH+G K+A+TLASTGTPSFF+H AEA H
Sbjct: 20  ALKDRIGDEFVAAVNCILKCPARVVVTGMGKSGHVGRKIAATLASTGTPSFFLHPAEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T +D++I +S SG S E+  IL   RR    +IA++   +S +    D  + + 
Sbjct: 80  GDLGMVTENDVVIAISNSGESTEIVNILPIIRRIGATIIAMSGRRESQLGKFCDYFIDIS 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP GLAPT S    LA+GDA+A+AL+  RNF+  DF + HPGG LG  L +   +
Sbjct: 140 VEREACPLGLAPTASTTATLAMGDAIAMALMSERNFTSQDFAMFHPGGALGRRLLLKVEN 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           VMH+G   PL+  G  + DA+ ++++K  G V+VVD+  K  G+IT+G I R   KD   
Sbjct: 200 VMHTGKDNPLIHCGKTVKDALFVMTDKGLGAVSVVDDEGKFVGLITDGIIRRALAKDYKF 259

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLR 337
           L  +VE +M   P  I    +   A+ ++ +H    ++VL V+D+    +GIVH  DLLR
Sbjct: 260 LDEAVEKIMFTEPLTIAPQQMAAAALSVMEKHKPRPVTVLPVIDEKGVPVGIVHLTDLLR 319

Query: 338 FGII 341
            G++
Sbjct: 320 QGVV 323


>gi|322834664|ref|YP_004214691.1| KpsF/GutQ family protein [Rahnella sp. Y9602]
 gi|321169865|gb|ADW75564.1| KpsF/GutQ family protein [Rahnella sp. Y9602]
          Length = 328

 Score =  242 bits (617), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  + G+    F  A EKI A  G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLEQLDQYINGD----FTRACEKIFACNGKVVVMGMGKSGHIGRKMAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+++ D++I++S SG + E+  ++   +R  I LI +TS  +S + 
Sbjct: 79  FFVHPGEASHGDLGMVSKQDVVILISNSGEAHEILGLIPVLKRLGITLICMTSNPESTMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG L
Sbjct: 139 KAADVHLCVKVPKEACPLGLAPTSSTTAVLVMGDALAVALLEARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + ++  K++GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVSREASLRDALLEITRKNLGMTVICNDLMKIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    ++NT S+ DVM      +    L   A+ L++  +I+ +MV D  Q  +G++
Sbjct: 259 RRIFDMGVNINTASIADVMTTGGIRVRPSLLAVDALNLMQDKHITCVMVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|238899002|ref|YP_002924684.1| D-arabinose 5-phosphate isomerase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229466762|gb|ACQ68536.1| D-arabinose 5-phosphate isomerase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 325

 Score =  242 bits (617), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 198/311 (63%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ LE  +  +  F+  CA   I + +G++VI G+GKSGHIG K+A+T ASTGTP+
Sbjct: 20  ECAGLAQLEQYINED--FEKACA--HIFSCQGKLVIMGMGKSGHIGCKIAATFASTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH +EA+HGDLGMI++ D+++ +S SG ++E+ +++   +R  I LI +T++  S + 
Sbjct: 76  FFVHPSEANHGDLGMISQGDIVLAISNSGEANEILSLIPLLKRQHIFLICMTADPNSTMG 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+E DF   HPGG+L
Sbjct: 136 EAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTEKDFARSHPGGRL 195

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L D +  +++K+ G  A+ D   K++GI T+GD+
Sbjct: 196 GRKLLLRVSDMMHTGSDIPFVYSNASLRDTLLEMTQKKLGLTAICDHNMKIEGIFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F K  DLN   +  +M  NP  +    L   A+ L++ H+I+ L+V     + +G+V
Sbjct: 256 RRVFDKQIDLNKAHINHLMTSNPVQVKPGLLAVEALNLMQLHHITALLVSKK-SRLVGVV 314

Query: 331 HFLDLLRFGII 341
           H  D+LR G+I
Sbjct: 315 HMHDMLRSGVI 325


>gi|145590086|ref|YP_001156683.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048492|gb|ABP35119.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 330

 Score =  241 bits (616), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 132/325 (40%), Positives = 198/325 (60%), Gaps = 3/325 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  T++ A  ++  E   L ++   L+G  +     AVE +   KGR+V++GIGKSGHI 
Sbjct: 6   RERTLKLARDTLTIEAAALQTMRDRLEGANADALILAVELLHHCKGRIVVSGIGKSGHIA 65

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTG+P+FFVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R   
Sbjct: 66  RKIAATFASTGSPAFFVHPAEASHGDLGMVTRDDVFVALSNSGETEELLTIVPIVKRTGA 125

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T    S +A  AD  L    E E+CP  LAPTTS    LA+GDALA++LL++R F
Sbjct: 126 KLIALTGAPNSSLAKLADAHLDTSVEKEACPLNLAPTTSTTAALAMGDALAVSLLDARGF 185

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG+LG  L    S+VM S D+ P + I   L DA+  ++ KR G V ++D
Sbjct: 186 QAEDFIRSHPGGRLGRKLLAHVSEVMRSFDNTPKISIQASLQDALLEMTSKRMGMVVILD 245

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E QK+ GI+T+GD+ R   K+ N  ++++ +    +P+ I  + L   A++++ +H I+ 
Sbjct: 246 EQQKVFGILTDGDLRRLLEKNTNLGSVTLRNATTPSPRTIPPELLAEEAIEMMEKHRINH 305

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V +     +G ++  DL    +I
Sbjct: 306 LVVTNTEGHLLGALNLHDLFAAKVI 330


>gi|254435747|ref|ZP_05049254.1| sugar isomerase, KpsF/GutQ family [Nitrosococcus oceani AFC27]
 gi|207088858|gb|EDZ66130.1| sugar isomerase, KpsF/GutQ family [Nitrosococcus oceani AFC27]
          Length = 322

 Score =  241 bits (616), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 200/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +Q     I  E   +++L + + G     F  A + + A +GR+VI G+GKSGHI
Sbjct: 1   MDKRLIQLGAAVIDTEAHAIAALRTRING----NFAAACKYMLACEGRIVILGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG ++E+  IL   +R  
Sbjct: 57  GGKIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIA+T + +S +   ADI + +  E E+CP GLAPT S+   LA+GDALAIALLESR 
Sbjct: 117 VPLIALTGQPRSTLGKVADIHIDISVEKEACPLGLAPTASSTATLAMGDALAIALLESRG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCA-SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG+LG   +   SD+MH G+ IP +     L  A+  ++ K  G  AVV
Sbjct: 177 FTAEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAIPENVLLSSALLEMTRKGLGMTAVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +      GI T+GD+ R   +  D++   +  +M  N K +  D L   A+Q++++H I+
Sbjct: 237 NAQNHAVGIFTDGDLRRALDQGIDVHITPIAKIMTANCKTLGPDLLAAEALQIMQRHRIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD  Q+ IG ++  DLLR G++
Sbjct: 297 ALLVVDTEQRLIGALNMHDLLRAGVL 322


>gi|239947699|ref|ZP_04699452.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921975|gb|EER21999.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 319

 Score =  241 bits (616), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 195/312 (62%), Gaps = 5/312 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGRV++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRVILTGIGKSGYIAKKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV       + I ++++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKVKNLMRSGDEIPLVYEDTSFAETIIVMNKKRLGCTLVTDKNQNLVGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD+ R+ +  +       +M KNP  I  +     A+ L++  NI+ + +VD+    IG
Sbjct: 248 DGDLRRHINDQIYLKIASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDN-NVIIG 306

Query: 329 IVHFLDLLRFGI 340
           I+H  DLLR G+
Sbjct: 307 IIHIHDLLRIGV 318


>gi|186475100|ref|YP_001856570.1| KpsF/GutQ family protein [Burkholderia phymatum STM815]
 gi|184191559|gb|ACC69524.1| KpsF/GutQ family protein [Burkholderia phymatum STM815]
          Length = 346

 Score =  241 bits (616), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 142/301 (47%), Positives = 191/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL+  L   F  A++ I   +GRVV++GIGKSGHI  KLA+TLASTGTP+FFVH AEASH
Sbjct: 46  SLRDHLDDAFVEAIDFILGCRGRVVVSGIGKSGHIARKLAATLASTGTPAFFVHPAEASH 105

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S SG S+EL AIL   +R    +IA+T    S +A  AD+ L   
Sbjct: 106 GDLGMVTADDVFIGMSNSGESEELVAILPLVKRLGAKMIAMTGRPGSSLAKIADVHLYCG 165

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CPH LAPT S    LA+GDALA+A+LE+R F  +DF   HPGG LG  L     D
Sbjct: 166 VEKEACPHNLAPTASTTAALALGDALAVAVLEARGFGADDFARSHPGGALGRRLLTYVRD 225

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD IP V     + DA+  L+ KR G  A+VDE +++KGI T+GD+ R   +  D 
Sbjct: 226 VMRTGDQIPKVLSDATVRDALFQLTAKRMGMTAIVDENERVKGIFTDGDLRRVLERDGDF 285

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L+++ VM   P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 286 RALTIDSVMTHGPRTIGSDRLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 345

Query: 341 I 341
           I
Sbjct: 346 I 346


>gi|311277830|ref|YP_003940061.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
 gi|308747025|gb|ADO46777.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
          Length = 328

 Score =  241 bits (616), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E++    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAQLDQYINQD----FALACERMFKCGGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +T    S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTAQDVVIALSNSGESNEILALIPVLKRLQVPLICMTGRADSSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +  + E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCVKVQKEACPLGLAPTSSTTAALVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+   + GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPRVNKAASLRDALLEITRKNLGMTVICDDQMTIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+ +LS+ DVM      +   TL    + L++  +I+ +MV D     +G+V
Sbjct: 259 RRVFDMGADVRSLSIADVMTHGGIRVRSGTLAVDVLNLMQSRHITCVMVADG-DHLLGVV 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|284008690|emb|CBA75349.1| arabinose 5-phosphate isomerase [Arsenophonus nasoniae]
          Length = 322

 Score =  241 bits (616), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL++LE  +  +    F+ A E I    G+VV+ G+GKSGHIG K+A+TLASTGTP+
Sbjct: 17  ERSGLANLEQYINDD----FNQACELIFKCTGKVVVMGMGKSGHIGRKIAATLASTGTPA 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMI+  D+++ +S SG S+E+ A++   +R  I LI +T    S + 
Sbjct: 73  FFVHPGEASHGDLGMISSKDIVLAISNSGESNEILALIPVLKRQHIALICMTKNPDSSMG 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDA+A+ALLE+R F+  DF + HPGG L
Sbjct: 133 KAADIHLCIKVPQEACPLGLAPTTSTTAMLVMGDAIAVALLEARGFTAEDFALSHPGGTL 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G +IP V     L  A+  ++ K+ G V + +E  +++GI T+GD+
Sbjct: 193 GRKLLLRVSDLMHTGKNIPNVPKQATLQQALVEITRKKLGMVVICNEEMQIEGIFTDGDL 252

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F  + DLN   + DVM      +  D L   A+ L++QH+I+ L++       IG++
Sbjct: 253 RRVFAMNIDLNNAKIADVMTTGGIRVKPDMLAIDALNLMQQHHITSLLIA-KADTLIGVI 311

Query: 331 HFLDLLRFGII 341
           H  DLL+ GII
Sbjct: 312 HLHDLLQAGII 322


>gi|90413004|ref|ZP_01221002.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           3TCK]
 gi|90326019|gb|EAS42458.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           3TCK]
          Length = 323

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/292 (43%), Positives = 193/292 (66%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A E I +  G+V++ G+GKSGHIG+K+A+TLASTGTPSFFVH  EASHGDLGMI + 
Sbjct: 33  FTQACELILSSHGKVIVMGMGKSGHIGNKIAATLASTGTPSFFVHPGEASHGDLGMIEKG 92

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ +S SG + E+ ++L   +R  IPLI++T + +S +A  + + L +    E+CP  
Sbjct: 93  DVVLAISNSGEAGEILSLLPVIKRLGIPLISVTGKPESSMAKFSQVHLQITVAAEACPLN 152

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    LA+GDALAIAL+E+R F+ NDF + HPGG LG  L +  +DVMH+GD +P
Sbjct: 153 LAPTSSTTATLAMGDALAIALMEARGFTANDFALSHPGGALGRKLLLRIADVMHTGDLLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           ++     + DA+  +S K  G  AVV+  Q+L GI T+GD+ R   K  D++  ++ DVM
Sbjct: 213 IINEAATIKDALLEVSRKGLGMTAVVNSEQQLTGIFTDGDLRRLLDKRVDIHNTAIGDVM 272

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +NP  I  + L    ++L+  + I+ L++ ++ Q  +G ++  DLL+ G++
Sbjct: 273 GRNPSTIEANVLAAEGLKLMEDNKINGLLITENGQ-LVGALNMHDLLKAGVM 323


>gi|77166240|ref|YP_344765.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrosococcus oceani ATCC 19707]
 gi|76884554|gb|ABA59235.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrosococcus oceani ATCC 19707]
          Length = 330

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 200/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +Q     I  E   +++L + + G     F  A + + A +GR+VI G+GKSGHI
Sbjct: 9   MDKRLIQLGAAVIDTEAHAIAALRTRING----NFAAACKYMLACEGRIVILGMGKSGHI 64

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG ++E+  IL   +R  
Sbjct: 65  GGKIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLG 124

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIA+T + +S +   ADI + +  E E+CP GLAPT S+   LA+GDALAIALLESR 
Sbjct: 125 VPLIALTGQPRSTLGKVADIHIDISVEKEACPLGLAPTASSTATLAMGDALAIALLESRG 184

Query: 199 FSENDFYVLHPGGKLGTLFVCA-SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG+LG   +   SD+MH G+ IP +     L  A+  ++ K  G  AVV
Sbjct: 185 FTAEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAIPENVLLSSALLEMTRKGLGMTAVV 244

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +      GI T+GD+ R   +  D++   +  +M  N K +  D L   A+Q++++H I+
Sbjct: 245 NAQNHAVGIFTDGDLRRALDQGIDVHITPIAKIMTANCKTLGPDLLAAEALQIMQRHRIN 304

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD  Q+ IG ++  DLLR G++
Sbjct: 305 ALLVVDTEQRLIGALNMHDLLRAGVL 330


>gi|330501877|ref|YP_004378746.1| KpsF/GutQ family protein [Pseudomonas mendocina NK-01]
 gi|328916163|gb|AEB56994.1| KpsF/GutQ family protein [Pseudomonas mendocina NK-01]
          Length = 324

 Score =  241 bits (616), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E   +  L   +  +    F  A E I    GRVV+ G+GKSGHIG+K+A
Sbjct: 8   IDSAQRTIRLELEAVQELLPRINAD----FIKACELILNCNGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTTAFFVHPAEASHGDMGMITKDDIVLALSNSGSTAEIVTLLPLIKRLGIRLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPDSPLAKAAEVNLDARVSQEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMH  D++P V  G  L DA+  +++K  G   V++E  +
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHKDDALPRVHRGTSLRDALLEMTQKGLGMTVVLEEDGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+   S+++VM  + K    + L   A++++  H I+ L+VV
Sbjct: 244 LAGIFTDGDLRRTLDKGIDVRHASIDEVMTPHGKTARAEMLAAEALKIMEDHKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           DD    +G ++  DLLR G++
Sbjct: 304 DDQDNPVGALNMHDLLRAGVM 324


>gi|227112738|ref|ZP_03826394.1| D-arabinose 5-phosphate isomerase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 363

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 205/333 (61%), Gaps = 9/333 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           +K H L  +   Q A + +++ E+ GL+ L+  +       F  A +KI   +G+VV+ G
Sbjct: 36  QKAHELPADFDFQQAGKQVLSIERDGLAQLDQYIDDN----FTLACKKIFDCQGKVVVMG 91

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ +++
Sbjct: 92  MGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLI 151

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+
Sbjct: 152 PVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGDALAV 211

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALL++R F+  DF + HPGG LG  L +  SD+MHSGD IP V     L DA+  ++ K 
Sbjct: 212 ALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEITRKN 271

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   + +   K++GI T+GD+ R F  + DLN+  + DVM      +   TL   A+ L
Sbjct: 272 LGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDALNL 331

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 332 MQSRHITSVLVAEN-DRLVGIVHMHDMLRAGVV 363


>gi|227326635|ref|ZP_03830659.1| D-arabinose 5-phosphate isomerase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 363

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 205/333 (61%), Gaps = 9/333 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           +K H L  +   Q A + +++ E+ GL+ L+  +       F  A +KI   +G+VV+ G
Sbjct: 36  QKAHELPADFDFQQAGKQVLSIERDGLAQLDQYIDDN----FTLACKKIFDCQGKVVVMG 91

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ +++
Sbjct: 92  MGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLI 151

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+
Sbjct: 152 PVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGDALAV 211

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALL++R F+  DF + HPGG LG  L +  SD+MHSGD IP V     L DA+  ++ K 
Sbjct: 212 ALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEITRKN 271

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   + +   K++GI T+GD+ R F  + DLN+  + DVM      +   TL   A+ L
Sbjct: 272 LGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDALNL 331

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 332 MQSRHITSVLVAEN-DRLVGIVHMHDMLRAGVV 363


>gi|170765843|ref|ZP_02900654.1| arabinose 5-phosphate isomerase [Escherichia albertii TW07627]
 gi|170124989|gb|EDS93920.1| arabinose 5-phosphate isomerase [Escherichia albertii TW07627]
          Length = 328

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 187/302 (61%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   ++  F  A EK+   KG+VV+ G+GKSGHIG K+A+T ASTGTPSFFVH  EA+
Sbjct: 28  AELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAA 87

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT    S +A  AD+ L +
Sbjct: 88  HGDLGMVTPQDVVIAISNSGESSEISALIPVLKRLRVPLICITGRPDSSMARAADVHLCV 147

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG LG  L +  S
Sbjct: 148 KVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVS 207

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+GD IP VK    L DA+  ++ K  G   + D+   ++GI T+GD+ R F    D
Sbjct: 208 DIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVD 267

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L + DVM      +    L   A+ L++  +I+ +MV D   + +G++H  DLLR G
Sbjct: 268 VRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADG-DRLLGVLHMHDLLRAG 326

Query: 340 II 341
           ++
Sbjct: 327 VV 328


>gi|67459112|ref|YP_246736.1| KpsF protein [Rickettsia felis URRWXCal2]
 gi|67004645|gb|AAY61571.1| KpsF protein [Rickettsia felis URRWXCal2]
          Length = 319

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 195/312 (62%), Gaps = 5/312 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPVDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + AIT   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAITMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M  G+ IPLV       + I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKNLMREGNEIPLVYEDTSFAETIIIMNKKRLGCTLVTDKNQNLIGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + +VDD     G
Sbjct: 248 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDD-NVITG 306

Query: 329 IVHFLDLLRFGI 340
           I+H  DLLR G+
Sbjct: 307 IIHIHDLLRIGV 318


>gi|320529930|ref|ZP_08031007.1| putative arabinose 5-phosphate isomerase [Selenomonas artemidis
           F0399]
 gi|320137948|gb|EFW29853.1| putative arabinose 5-phosphate isomerase [Selenomonas artemidis
           F0399]
          Length = 322

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 127/305 (41%), Positives = 187/305 (61%), Gaps = 6/305 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L+  +  +F  AV  I   K RVV+TG+GKSGH+G K+A+TLASTGTP+FF+H AEA 
Sbjct: 18  ARLKERIDDEFEAAVRAILECKARVVVTGMGKSGHVGRKIAATLASTGTPAFFMHPAEAF 77

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+T DD++I +S SG S+E+  IL    R    +IA+    +S +   AD  + +
Sbjct: 78  HGDLGMVTTDDIVIAISNSGESNEVVNILSIIHRIGARIIAMCGRRQSQLGRSADFYIDI 137

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP GLAPT+S    LA+GDA+A+AL+ +R+F + D+ + HPGG LG  L +  +
Sbjct: 138 GVEREACPLGLAPTSSTTATLAMGDAIAMALMAARDFKKEDYALFHPGGALGRRLLLTVA 197

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           +VMH+ D  P+V       DA+ ++++K  G  +VVD   K  G++T+G I R   KD  
Sbjct: 198 NVMHTSDENPVVSYHTSAKDALFVMTDKGLGAASVVDANGKFIGLVTDGIIRRALAKDYT 257

Query: 282 TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLL 336
            L   V+++M   P  I  D +   A+ ++  H    ++VL VVD     +GIVH  DLL
Sbjct: 258 FLDEEVQNIMFATPLTIAPDKMAAAALHVMEAHKPRPVTVLPVVDAAGVPVGIVHLTDLL 317

Query: 337 RFGII 341
           R G++
Sbjct: 318 RQGVV 322


>gi|253686684|ref|YP_003015874.1| KpsF/GutQ family protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753262|gb|ACT11338.1| KpsF/GutQ family protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 363

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 137/333 (41%), Positives = 205/333 (61%), Gaps = 9/333 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           +K H L  +   Q A + +I+ E+ GL+ L+  +       F  A +KI   +G+VV+ G
Sbjct: 36  QKSHELPADFDFQQAGKQVISIERDGLAQLDQYIDDN----FTLACKKIFDCQGKVVVMG 91

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ +++
Sbjct: 92  MGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEILSLI 151

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  + LI +TS  +S +   ADI L +    E+CP GLAPT+S    L +GDALA+
Sbjct: 152 PVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTSSTTATLVMGDALAV 211

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALL++R F+  DF + HPGG LG  L +  SD+MHSGD IP V     L DA+  ++ K 
Sbjct: 212 ALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEITRKN 271

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   + +   K++GI T+GD+ R F  + DLN+  + DVM      +   TL   A+ L
Sbjct: 272 LGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDALNL 331

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 332 MQSRHITSVLVAEN-DRLVGIVHMHDMLRAGVV 363


>gi|91791858|ref|YP_561509.1| KpsF/GutQ family protein [Shewanella denitrificans OS217]
 gi|91713860|gb|ABE53786.1| KpsF/GutQ family protein [Shewanella denitrificans OS217]
          Length = 325

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 138/325 (42%), Positives = 203/325 (62%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N   Q   + I  EK   ++LE   Q   S  F  A E I   KG+V++ G+GKSGHIG
Sbjct: 4   QNQWRQWGCKVIDIEK---AALEHLYQFVDSDAFSQACELILQCKGKVIVMGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG + ++D+I+ +S SG S E+  +L   +R  +
Sbjct: 61  NKISATLASTGTPAFFVHPGEASHGDLGALAKEDIILAISNSGESSEILTLLPVIQRMGV 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAIT + +S +A  A I L +    E+CP GLAPT+S    L +GDALA+ALL+++ F
Sbjct: 121 PVIAITGKPESNMAKLAKIHLCIQVPEEACPLGLAPTSSTTATLVMGDALAVALLQAKGF 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +++DF + HPGG LG  L +  SDVMH  D +P V     + +A+  +S+K  G  AVVD
Sbjct: 181 TQDDFALSHPGGSLGRKLLLKVSDVMHQDDRLPCVPHDICITEALYEISKKGLGMTAVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             Q L GI T+GD+ R    ++N  T  +E VM KN        L   A+Q++   NI+ 
Sbjct: 241 ANQCLVGIFTDGDLRRVIDAEVNLRTTPIEQVMTKNCVTTTAGILAAQALQVMESKNING 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VV++ Q+ IG ++ LD+++ G+I
Sbjct: 301 LIVVNEQQQPIGALNMLDMVKAGVI 325


>gi|15803737|ref|NP_289771.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 EDL933]
 gi|15833330|ref|NP_312103.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751603|ref|ZP_02776625.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754179|ref|ZP_02779186.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168763734|ref|ZP_02788741.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769053|ref|ZP_02794060.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777252|ref|ZP_02802259.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781341|ref|ZP_02806348.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786083|ref|ZP_02811090.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC869]
 gi|168800911|ref|ZP_02825918.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC508]
 gi|195940053|ref|ZP_03085435.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208809687|ref|ZP_03252024.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812147|ref|ZP_03253476.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818568|ref|ZP_03258888.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396758|ref|YP_002272667.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327071|ref|ZP_03443154.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795146|ref|YP_003079983.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261228208|ref|ZP_05942489.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255064|ref|ZP_05947597.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|37079503|sp|Q8X9J0|KDSD_ECO57 RecName: Full=Arabinose 5-phosphate isomerase
 gi|12517815|gb|AAG58331.1|AE005548_2 putative isomerase [Escherichia coli O157:H7 str. EDL933]
 gi|13363549|dbj|BAB37499.1| putative isomerase [Escherichia coli O157:H7 str. Sakai]
 gi|187767457|gb|EDU31301.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014385|gb|EDU52507.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001004|gb|EDU69990.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358615|gb|EDU77034.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361734|gb|EDU80153.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366147|gb|EDU84563.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374048|gb|EDU92464.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376830|gb|EDU95246.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC508]
 gi|208729488|gb|EDZ79089.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733424|gb|EDZ82111.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738691|gb|EDZ86373.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158158|gb|ACI35591.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209758070|gb|ACI77347.1| putative isomerase [Escherichia coli]
 gi|209758072|gb|ACI77348.1| putative isomerase [Escherichia coli]
 gi|209758076|gb|ACI77350.1| putative isomerase [Escherichia coli]
 gi|217319438|gb|EEC27863.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594546|gb|ACT73907.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189550|gb|EFW64209.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326337897|gb|EGD61731.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           1125]
 gi|326347467|gb|EGD71192.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           1044]
          Length = 328

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  IPLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHIPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|315634296|ref|ZP_07889583.1| arabinose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
 gi|315476886|gb|EFU67631.1| arabinose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
          Length = 311

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 130/300 (43%), Positives = 189/300 (63%), Gaps = 11/300 (3%)

Query: 41  LESSLQGELSFQFHCA----VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           +E    G+LS +  C     V+ I   KGR+VI GIGKSG +G K+ +T ASTGTPSFF+
Sbjct: 13  VEEKALGQLSEKLDCTFTEVVDLILNCKGRLVIGGIGKSGLVGKKMVATFASTGTPSFFL 72

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HA
Sbjct: 73  HPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKIIALTSNKNSTLARHA 132

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL +  E E CP+ LAPTTS ++ +A+GDALA+ L+ +R+F   DF   HPGG LG  
Sbjct: 133 DYVLDISVEREVCPNNLAPTTSVVVTMALGDALAVCLMRARDFQPEDFAKFHPGGSLGRR 192

Query: 217 FVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            +C   D M +   +P+  +     D +TI++E R G VA+V E Q+L+GIIT+GDI R 
Sbjct: 193 LLCRVKDQMQT--RLPIAALTTSFTDCLTIMNEGRMG-VALVMEQQQLRGIITDGDIRRA 249

Query: 276 FHKD-LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +  NTLS   +++M  +PK I +DT L+ A   ++ H I  L+VVDD Q  +G+V F
Sbjct: 250 LTANGANTLSKTAQELMTSHPKTIHQDTYLSEAENYMKAHKIHSLVVVDDAQNVVGLVEF 309


>gi|313199985|ref|YP_004038643.1| kpsf/gutq family protein [Methylovorus sp. MP688]
 gi|312439301|gb|ADQ83407.1| KpsF/GutQ family protein [Methylovorus sp. MP688]
          Length = 332

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 182/296 (61%), Gaps = 3/296 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  AVE I   +GR+V+TG+GKSGHIG+K+A+T ASTGTP+FFVH AEASH
Sbjct: 32  ALARRLDDSFTRAVELILQCQGRIVVTGMGKSGHIGNKIAATFASTGTPAFFVHPAEASH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT  D++I LS SG +DEL+ IL   +R    LI+IT   +S +   AD+ L   
Sbjct: 92  GDLGMITGKDVVIALSNSGEADELRVILPTLKRMGARLISITGHPQSTLGKAADVSLDAH 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALAIA+++ R FS  +F + HPGG LG  L +   D
Sbjct: 152 VTEEACPLALAPTASTTASLALGDALAIAVMDQRGFSAEEFALSHPGGTLGRKLLLHVRD 211

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD+IP V +   L + +  +S K  G  A+VD  Q   G+ T+GD+ R F    D+
Sbjct: 212 VMRTGDAIPSVGVEASLKEGLLEMSRKGLGMTAIVDAEQHAVGVFTDGDLRRAFENAVDI 271

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N+  + DVM  +P+ I  + L   A+ ++ Q  I+ L+V D     IG ++  DLL
Sbjct: 272 NSTYMRDVMHTSPQQIRPEQLAVDAVAIMEQKKITSLLVTDQQGTLIGALNMHDLL 327


>gi|283836256|ref|ZP_06355997.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291067620|gb|EFE05729.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 328

 Score =  241 bits (615), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+ GL+ L+  +    +  F  A EKI +  G+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIEREGLAELDQYI----NQNFTLACEKIFSCPGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM++  D++I +S SG S+E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVSPQDVVIAISNSGESNEIAALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 MTGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVNKSASLRDALLEITRKNLGMTVICDDAMK 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DLLLGVLHMHDLLRAGVV 328


>gi|325273319|ref|ZP_08139591.1| KpsF/GutQ family protein [Pseudomonas sp. TJI-51]
 gi|324101552|gb|EGB99126.1| KpsF/GutQ family protein [Pseudomonas sp. TJI-51]
          Length = 324

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 140/321 (43%), Positives = 199/321 (61%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R++  E   L ++E  L   +   F  A E I A +GRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTVRLE---LEAVEG-LLARIDEHFVKACELILASQGRVVVLGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGD+GMIT +D+I+ LS SGS+ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTPAFFVHPAEASHGDMGMITGNDIILALSNSGSTAEIVTLLPLVKRLGITLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 LTGNPDSTLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +    VMHSGD +P V  G  L DA+  +S K  G  AV++   K
Sbjct: 184 FAFSHPGGALGRRLLLKVEHVMHSGDQLPKVLRGTLLKDALLEMSRKGLGMTAVLEADGK 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  + I+ L+VV
Sbjct: 244 LAGIFTDGDLRRSLDRNIDVHTTLIDHVMTVHGKTARAEMLAAEALKIMEDNKINALVVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   +  G ++  DLLR G++
Sbjct: 304 DQDDRPTGALNMHDLLRAGVM 324


>gi|110807063|ref|YP_690583.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 5 str. 8401]
 gi|110616611|gb|ABF05278.1| putative isomerase [Shigella flexneri 5 str. 8401]
 gi|281602580|gb|ADA75564.1| Arabinose 5-phosphate isomerase [Shigella flexneri 2002017]
          Length = 335

 Score =  241 bits (614), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 20  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 75

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH +EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 76  ATFASTGTPSFFVHPSEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 135

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 136 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 195

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 196 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 255

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 256 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 315

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 316 DG-DHLLGVLHMHDLLRAGVV 335


>gi|114564533|ref|YP_752047.1| KpsF/GutQ family protein [Shewanella frigidimarina NCIMB 400]
 gi|114335826|gb|ABI73208.1| KpsF/GutQ family protein [Shewanella frigidimarina NCIMB 400]
          Length = 325

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 201/320 (62%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A + I   KG+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGRKVIDIEKAALDNLYQYVD---SVEFDQACQLIMQCKGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLG + ++D+++ +S SG S E+  ++   +R  +P+IA+
Sbjct: 66  TFASTGTPAFFVHPGEASHGDLGALAKNDIVLAISNSGESSEILTLMPVIQRMGVPVIAV 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  + I L +  + E+CP GLAPT+S    LA+GDALAIALL+++ F+ +DF
Sbjct: 126 TGKPDSNMARLSKIHLCIQVQEEACPLGLAPTSSTTATLAMGDALAIALLQAKGFTRDDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +   DVMH GD +P+V     + DA+  +S+K  G  AVVD   KL
Sbjct: 186 ALSHPGGSLGRKLLLKVDDVMHQGDDLPIVNDDICITDALYEISKKGLGMTAVVDHASKL 245

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R    D+N  T S+  VM KN        L   A+Q++ + +I+ L+VV+
Sbjct: 246 VGIFTDGDLRRVIDADVNLRTTSIAHVMTKNCVTSPAGILAAQALQIMDEKSINGLIVVN 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IG ++ LD+++ G+I
Sbjct: 306 EKHQPIGALNMLDMVKAGVI 325


>gi|332086228|gb|EGI91386.1| arabinose 5-phosphate isomerase [Shigella boydii 5216-82]
          Length = 328

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GD+LA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDSLAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +KGI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IKGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|30064535|ref|NP_838706.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|56480283|ref|NP_708996.2| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 301]
 gi|37079424|sp|Q83JF4|KDSD_SHIFL RecName: Full=Arabinose 5-phosphate isomerase
 gi|30042794|gb|AAP18517.1| putative isomerase [Shigella flexneri 2a str. 2457T]
 gi|56383834|gb|AAN44703.2| putative isomerase [Shigella flexneri 2a str. 301]
 gi|313648560|gb|EFS13002.1| arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|332752356|gb|EGJ82746.1| arabinose 5-phosphate isomerase [Shigella flexneri 4343-70]
 gi|332752882|gb|EGJ83267.1| arabinose 5-phosphate isomerase [Shigella flexneri K-671]
 gi|332754544|gb|EGJ84910.1| arabinose 5-phosphate isomerase [Shigella flexneri 2747-71]
 gi|332765193|gb|EGJ95420.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Shigella flexneri 2930-71]
 gi|332998839|gb|EGK18435.1| arabinose 5-phosphate isomerase [Shigella flexneri VA-6]
 gi|332999276|gb|EGK18862.1| arabinose 5-phosphate isomerase [Shigella flexneri K-272]
 gi|332999920|gb|EGK19503.1| arabinose 5-phosphate isomerase [Shigella flexneri K-218]
 gi|333014642|gb|EGK33989.1| arabinose 5-phosphate isomerase [Shigella flexneri K-304]
 gi|333015000|gb|EGK34344.1| arabinose 5-phosphate isomerase [Shigella flexneri K-227]
          Length = 328

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH +EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPSEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|91212622|ref|YP_542608.1| D-arabinose 5-phosphate isomerase [Escherichia coli UTI89]
 gi|237706051|ref|ZP_04536532.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 3_2_53FAA]
 gi|254038362|ref|ZP_04872420.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 1_1_43]
 gi|332279972|ref|ZP_08392385.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|91074196|gb|ABE09077.1| putative isomerase [Escherichia coli UTI89]
 gi|226839986|gb|EEH72007.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 1_1_43]
 gi|226899091|gb|EEH85350.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 3_2_53FAA]
 gi|332102324|gb|EGJ05670.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
          Length = 335

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 20  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 75

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 76  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 135

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 136 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 195

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 196 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 255

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 256 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 315

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 316 DG-DHLLGVLHMHDLLRAGVV 335


>gi|254515272|ref|ZP_05127333.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR5-3]
 gi|219677515|gb|EED33880.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR5-3]
          Length = 325

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 195/321 (60%), Gaps = 8/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E + +++LE+ + GE   +F  A E I  + GR V+TG+GKSGH+G K+A
Sbjct: 8   LHSAQRTIRMEAQAVAALEARI-GE---EFETACELILKVPGRTVVTGMGKSGHVGGKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH  EASHGD+GMIT DD +I LS SG++ E+  ++   +R  +PLI+
Sbjct: 64  ATLASTGTPAFFVHPGEASHGDMGMITADDCVIALSNSGTTPEVLMLVPLLKRLGVPLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  +D  +    E E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 MTGAPGSALAQASDAHINTGVEVEACPLDLAPTSSTTTTLVMGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ- 261
           F   HPGG LG  L +   DVM  GD+IP V    PL  A+  +S K  G   V   G  
Sbjct: 184 FAFSHPGGALGRKLLLKIDDVMRQGDAIPRVSENTPLSQALLEISAKGLGMTTVTASGSG 243

Query: 262 KLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L G+ T+GD+ R      D+ T  + D+M ++P       L   A++++ + +IS L+V
Sbjct: 244 ELVGVFTDGDLRRALDGQLDIKTTCIGDIMTRSPATAHSGILAAEALRIMEERHISALVV 303

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           +D+  +  G+V+ L LL  GI
Sbjct: 304 LDEQGQTAGVVNLLALLEAGI 324


>gi|226943412|ref|YP_002798485.1| Arabinose 5-phosphate isomerase protein [Azotobacter vinelandii DJ]
 gi|226718339|gb|ACO77510.1| Arabinose 5-phosphate isomerase protein [Azotobacter vinelandii DJ]
          Length = 344

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 136/338 (40%), Positives = 206/338 (60%), Gaps = 11/338 (3%)

Query: 8   FKSVTRK-GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           F++ +R   HS   ++ +Q A R+I  E   + +L + +       F  A + I   KGR
Sbjct: 14  FQATSRPMPHS---SNPIQSAQRTIRLEIEAIEALLARIDD----TFTTACKLILECKGR 66

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +V+ G+GKSGHIG K+A+TLASTGTP+FFVH  EASHGD+GMITRDDL++ LS SGS+ E
Sbjct: 67  IVVVGMGKSGHIGRKIAATLASTGTPAFFVHPGEASHGDMGMITRDDLVLALSNSGSTVE 126

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  +L   +R  I LI++T    S +A  A + L      E+CP  LAPT+S    L +G
Sbjct: 127 ILTLLPLIQRLGITLISMTGNPDSPLAGAATVNLDAGVSQEACPLNLAPTSSTTTALVLG 186

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           DALAIALLE+R F+  DF   HPGG LG  L +   ++MH+GDS+P V+ G  L +A+  
Sbjct: 187 DALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENIMHAGDSLPCVQRGTTLREALLE 246

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLT 303
           ++ K  G   V++   +L GI T+GD+ R   +  D+   ++++VM  + K      L  
Sbjct: 247 MTHKGLGMTVVLETDGRLAGIFTDGDLRRALDRNIDVRQATIDEVMTPHGKTARAGMLAA 306

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            A++++  H I+ L+VVD+  + +G ++  DLL+ G++
Sbjct: 307 QALKIMEDHKINALVVVDEEDRPVGALNMHDLLQAGVL 344


>gi|16131087|ref|NP_417664.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|74313734|ref|YP_312153.1| D-arabinose 5-phosphate isomerase [Shigella sonnei Ss046]
 gi|82545565|ref|YP_409512.1| D-arabinose 5-phosphate isomerase [Shigella boydii Sb227]
 gi|89109960|ref|AP_003740.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. W3110]
 gi|110643438|ref|YP_671168.1| D-arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|117625489|ref|YP_858812.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|157158811|ref|YP_001464675.1| D-arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|157162681|ref|YP_001459999.1| D-arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|170018553|ref|YP_001723507.1| D-arabinose 5-phosphate isomerase [Escherichia coli ATCC 8739]
 gi|170082731|ref|YP_001732051.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170679857|ref|YP_001745469.1| D-arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|187731792|ref|YP_001881888.1| D-arabinose 5-phosphate isomerase [Shigella boydii CDC 3083-94]
 gi|188494442|ref|ZP_03001712.1| arabinose 5-phosphate isomerase [Escherichia coli 53638]
 gi|191168645|ref|ZP_03030427.1| arabinose 5-phosphate isomerase [Escherichia coli B7A]
 gi|191174489|ref|ZP_03035989.1| arabinose 5-phosphate isomerase [Escherichia coli F11]
 gi|193065347|ref|ZP_03046418.1| arabinose 5-phosphate isomerase [Escherichia coli E22]
 gi|193070323|ref|ZP_03051266.1| arabinose 5-phosphate isomerase [Escherichia coli E110019]
 gi|194429127|ref|ZP_03061657.1| arabinose 5-phosphate isomerase [Escherichia coli B171]
 gi|194439202|ref|ZP_03071283.1| arabinose 5-phosphate isomerase [Escherichia coli 101-1]
 gi|209920672|ref|YP_002294756.1| D-arabinose 5-phosphate isomerase [Escherichia coli SE11]
 gi|215488513|ref|YP_002330944.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218555767|ref|YP_002388680.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218560267|ref|YP_002393180.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218691487|ref|YP_002399699.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|218696902|ref|YP_002404569.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218701966|ref|YP_002409595.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|238902299|ref|YP_002928095.1| D-arabinose 5-phosphate isomerase [Escherichia coli BW2952]
 gi|253771969|ref|YP_003034800.1| D-arabinose 5-phosphate isomerase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163139|ref|YP_003046247.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|256018884|ref|ZP_05432749.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|256024228|ref|ZP_05438093.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 4_1_40B]
 gi|260857324|ref|YP_003231215.1| D-arabinose 5-phosphate isomerase [Escherichia coli O26:H11 str.
           11368]
 gi|260869948|ref|YP_003236350.1| D-arabinose 5-phosphate isomerase [Escherichia coli O111:H- str.
           11128]
 gi|291284571|ref|YP_003501389.1| Arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293412568|ref|ZP_06655291.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293416626|ref|ZP_06659265.1| D-arabinose 5-phosphate isomerase [Escherichia coli B185]
 gi|293449530|ref|ZP_06663951.1| D-arabinose 5-phosphate isomerase [Escherichia coli B088]
 gi|300817548|ref|ZP_07097764.1| arabinose 5-phosphate isomerase [Escherichia coli MS 107-1]
 gi|300823837|ref|ZP_07103961.1| arabinose 5-phosphate isomerase [Escherichia coli MS 119-7]
 gi|300904389|ref|ZP_07122237.1| arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300926058|ref|ZP_07141880.1| arabinose 5-phosphate isomerase [Escherichia coli MS 182-1]
 gi|300929893|ref|ZP_07145335.1| arabinose 5-phosphate isomerase [Escherichia coli MS 187-1]
 gi|300938113|ref|ZP_07152887.1| arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300948852|ref|ZP_07162917.1| arabinose 5-phosphate isomerase [Escherichia coli MS 116-1]
 gi|300955786|ref|ZP_07168128.1| arabinose 5-phosphate isomerase [Escherichia coli MS 175-1]
 gi|300979954|ref|ZP_07174806.1| arabinose 5-phosphate isomerase [Escherichia coli MS 200-1]
 gi|301022099|ref|ZP_07186025.1| arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|301025901|ref|ZP_07189388.1| arabinose 5-phosphate isomerase [Escherichia coli MS 196-1]
 gi|301306743|ref|ZP_07212797.1| arabinose 5-phosphate isomerase [Escherichia coli MS 124-1]
 gi|301326370|ref|ZP_07219734.1| arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|301644911|ref|ZP_07244880.1| arabinose 5-phosphate isomerase [Escherichia coli MS 146-1]
 gi|306816461|ref|ZP_07450593.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|307139883|ref|ZP_07499239.1| D-arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|307313098|ref|ZP_07592724.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|309793776|ref|ZP_07688202.1| arabinose 5-phosphate isomerase [Escherichia coli MS 145-7]
 gi|312968464|ref|ZP_07782673.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|312972529|ref|ZP_07786703.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|331643895|ref|ZP_08345026.1| arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331654801|ref|ZP_08355801.1| arabinose 5-phosphate isomerase [Escherichia coli M718]
 gi|331659484|ref|ZP_08360426.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331664810|ref|ZP_08365715.1| arabinose 5-phosphate isomerase [Escherichia coli TA143]
 gi|331670024|ref|ZP_08370869.1| arabinose 5-phosphate isomerase [Escherichia coli TA271]
 gi|331674726|ref|ZP_08375485.1| arabinose 5-phosphate isomerase [Escherichia coli TA280]
 gi|331679276|ref|ZP_08379948.1| arabinose 5-phosphate isomerase [Escherichia coli H591]
 gi|1176842|sp|P45395|KDSD_ECOLI RecName: Full=Arabinose 5-phosphate isomerase
 gi|606135|gb|AAA57998.1| ORF_o328 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789588|gb|AAC76229.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|73857211|gb|AAZ89918.1| putative isomerase [Shigella sonnei Ss046]
 gi|81246976|gb|ABB67684.1| putative isomerase [Shigella boydii Sb227]
 gi|85675991|dbj|BAE77241.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K12
           substr. W3110]
 gi|110345030|gb|ABG71267.1| arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|115514613|gb|ABJ02688.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|157068361|gb|ABV07616.1| arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|157080841|gb|ABV20549.1| arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|169753481|gb|ACA76180.1| KpsF/GutQ family protein [Escherichia coli ATCC 8739]
 gi|169890566|gb|ACB04273.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517575|gb|ACB15753.1| arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|187428784|gb|ACD08058.1| arabinose 5-phosphate isomerase [Shigella boydii CDC 3083-94]
 gi|188489641|gb|EDU64744.1| arabinose 5-phosphate isomerase [Escherichia coli 53638]
 gi|190901339|gb|EDV61106.1| arabinose 5-phosphate isomerase [Escherichia coli B7A]
 gi|190905244|gb|EDV64883.1| arabinose 5-phosphate isomerase [Escherichia coli F11]
 gi|192926988|gb|EDV81611.1| arabinose 5-phosphate isomerase [Escherichia coli E22]
 gi|192956382|gb|EDV86842.1| arabinose 5-phosphate isomerase [Escherichia coli E110019]
 gi|194412852|gb|EDX29144.1| arabinose 5-phosphate isomerase [Escherichia coli B171]
 gi|194421898|gb|EDX37904.1| arabinose 5-phosphate isomerase [Escherichia coli 101-1]
 gi|209758068|gb|ACI77346.1| putative isomerase [Escherichia coli]
 gi|209758074|gb|ACI77349.1| putative isomerase [Escherichia coli]
 gi|209913931|dbj|BAG79005.1| putative isomerase [Escherichia coli SE11]
 gi|215266585|emb|CAS11024.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353634|emb|CAU99843.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218362535|emb|CAR00159.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218367036|emb|CAR04807.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218371952|emb|CAR19808.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|218429051|emb|CAR09858.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|222034914|emb|CAP77657.1| Arabinose 5-phosphate isomerase [Escherichia coli LF82]
 gi|238860738|gb|ACR62736.1| D-arabinose 5-phosphate isomerase [Escherichia coli BW2952]
 gi|242378740|emb|CAQ33530.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|253323013|gb|ACT27615.1| KpsF/GutQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975040|gb|ACT40711.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|253979196|gb|ACT44866.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|257755973|dbj|BAI27475.1| D-arabinose 5-phosphate isomerase [Escherichia coli O26:H11 str.
           11368]
 gi|257766304|dbj|BAI37799.1| D-arabinose 5-phosphate isomerase [Escherichia coli O111:H- str.
           11128]
 gi|260447776|gb|ACX38198.1| KpsF/GutQ family protein [Escherichia coli DH1]
 gi|262176881|gb|ACY27495.1| D-arabinose 5-phosphate isomerase [Escherichia coli LW1655F+]
 gi|281180239|dbj|BAI56569.1| putative isomerase [Escherichia coli SE15]
 gi|290764444|gb|ADD58405.1| Arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322620|gb|EFE62049.1| D-arabinose 5-phosphate isomerase [Escherichia coli B088]
 gi|291431982|gb|EFF04965.1| D-arabinose 5-phosphate isomerase [Escherichia coli B185]
 gi|291469339|gb|EFF11830.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493378|gb|ADE92134.1| arabinose 5-phosphate isomerase [Escherichia coli IHE3034]
 gi|299879923|gb|EFI88134.1| arabinose 5-phosphate isomerase [Escherichia coli MS 196-1]
 gi|300307889|gb|EFJ62409.1| arabinose 5-phosphate isomerase [Escherichia coli MS 200-1]
 gi|300317332|gb|EFJ67116.1| arabinose 5-phosphate isomerase [Escherichia coli MS 175-1]
 gi|300397695|gb|EFJ81233.1| arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|300403663|gb|EFJ87201.1| arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300417916|gb|EFK01227.1| arabinose 5-phosphate isomerase [Escherichia coli MS 182-1]
 gi|300451657|gb|EFK15277.1| arabinose 5-phosphate isomerase [Escherichia coli MS 116-1]
 gi|300456876|gb|EFK20369.1| arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300462179|gb|EFK25672.1| arabinose 5-phosphate isomerase [Escherichia coli MS 187-1]
 gi|300523605|gb|EFK44674.1| arabinose 5-phosphate isomerase [Escherichia coli MS 119-7]
 gi|300529846|gb|EFK50908.1| arabinose 5-phosphate isomerase [Escherichia coli MS 107-1]
 gi|300838022|gb|EFK65782.1| arabinose 5-phosphate isomerase [Escherichia coli MS 124-1]
 gi|300846934|gb|EFK74694.1| arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|301076762|gb|EFK91568.1| arabinose 5-phosphate isomerase [Escherichia coli MS 146-1]
 gi|305850026|gb|EFM50485.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|306907009|gb|EFN37517.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|307625204|gb|ADN69508.1| D-arabinose 5-phosphate isomerase [Escherichia coli UM146]
 gi|308122733|gb|EFO59995.1| arabinose 5-phosphate isomerase [Escherichia coli MS 145-7]
 gi|309703623|emb|CBJ02963.1| arabinose 5-phosphate isomerase [Escherichia coli ETEC H10407]
 gi|310334906|gb|EFQ01111.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|312286682|gb|EFR14593.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|312947754|gb|ADR28581.1| D-arabinose 5-phosphate isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315062503|gb|ADT76830.1| D-arabinose 5-phosphate isomerase [Escherichia coli W]
 gi|315137783|dbj|BAJ44942.1| arabinose 5-phosphate isomerase [Escherichia coli DH1]
 gi|315257125|gb|EFU37093.1| arabinose 5-phosphate isomerase [Escherichia coli MS 85-1]
 gi|315289004|gb|EFU48402.1| arabinose 5-phosphate isomerase [Escherichia coli MS 110-3]
 gi|315297937|gb|EFU57207.1| arabinose 5-phosphate isomerase [Escherichia coli MS 16-3]
 gi|315617280|gb|EFU97889.1| arabinose 5-phosphate isomerase [Escherichia coli 3431]
 gi|320186683|gb|EFW61407.1| Arabinose 5-phosphate isomerase [Shigella flexneri CDC 796-83]
 gi|320194682|gb|EFW69312.1| Arabinose 5-phosphate isomerase [Escherichia coli WV_060327]
 gi|320202111|gb|EFW76686.1| Arabinose 5-phosphate isomerase [Escherichia coli EC4100B]
 gi|320640268|gb|EFX09840.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645565|gb|EFX14574.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str.
           493-89]
 gi|320650875|gb|EFX19332.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str. H
           2687]
 gi|320656256|gb|EFX24168.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661946|gb|EFX29354.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320666781|gb|EFX33760.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154412|gb|EFZ40613.1| arabinose 5-phosphate isomerase [Escherichia coli EPECa14]
 gi|323162889|gb|EFZ48724.1| arabinose 5-phosphate isomerase [Escherichia coli E128010]
 gi|323165158|gb|EFZ50948.1| arabinose 5-phosphate isomerase [Shigella sonnei 53G]
 gi|323173543|gb|EFZ59172.1| arabinose 5-phosphate isomerase [Escherichia coli LT-68]
 gi|323178627|gb|EFZ64203.1| arabinose 5-phosphate isomerase [Escherichia coli 1180]
 gi|323183151|gb|EFZ68549.1| arabinose 5-phosphate isomerase [Escherichia coli 1357]
 gi|323189182|gb|EFZ74466.1| arabinose 5-phosphate isomerase [Escherichia coli RN587/1]
 gi|323376909|gb|ADX49177.1| KpsF/GutQ family protein [Escherichia coli KO11]
 gi|323936109|gb|EGB32403.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1520]
 gi|323941703|gb|EGB37882.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E482]
 gi|323946949|gb|EGB42965.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H120]
 gi|323951284|gb|EGB47159.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
 gi|323957656|gb|EGB53370.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
 gi|323961148|gb|EGB56762.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H489]
 gi|323966377|gb|EGB61811.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli M863]
 gi|323970240|gb|EGB65511.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
 gi|324008709|gb|EGB77928.1| arabinose 5-phosphate isomerase [Escherichia coli MS 57-2]
 gi|324012159|gb|EGB81378.1| arabinose 5-phosphate isomerase [Escherichia coli MS 60-1]
 gi|324018351|gb|EGB87570.1| arabinose 5-phosphate isomerase [Escherichia coli MS 117-3]
 gi|324119562|gb|EGC13444.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1167]
 gi|327251288|gb|EGE62977.1| arabinose 5-phosphate isomerase [Escherichia coli STEC_7v]
 gi|330909249|gb|EGH37763.1| arabinose 5-phosphate isomerase [Escherichia coli AA86]
 gi|331037366|gb|EGI09590.1| arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331048183|gb|EGI20260.1| arabinose 5-phosphate isomerase [Escherichia coli M718]
 gi|331054066|gb|EGI26095.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331058058|gb|EGI30040.1| arabinose 5-phosphate isomerase [Escherichia coli TA143]
 gi|331062937|gb|EGI34851.1| arabinose 5-phosphate isomerase [Escherichia coli TA271]
 gi|331068165|gb|EGI39561.1| arabinose 5-phosphate isomerase [Escherichia coli TA280]
 gi|331073341|gb|EGI44664.1| arabinose 5-phosphate isomerase [Escherichia coli H591]
 gi|332090720|gb|EGI95814.1| arabinose 5-phosphate isomerase [Shigella boydii 3594-74]
 gi|332345154|gb|AEE58488.1| arabinose 5-phosphate isomerase [Escherichia coli UMNK88]
          Length = 328

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|218706817|ref|YP_002414336.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|293406806|ref|ZP_06650732.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1412]
 gi|298382547|ref|ZP_06992144.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1302]
 gi|300897965|ref|ZP_07116341.1| arabinose 5-phosphate isomerase [Escherichia coli MS 198-1]
 gi|218433914|emb|CAR14831.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|291426812|gb|EFE99844.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1412]
 gi|298277687|gb|EFI19203.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1302]
 gi|300358313|gb|EFJ74183.1| arabinose 5-phosphate isomerase [Escherichia coli MS 198-1]
          Length = 328

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSISDVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|320538918|ref|ZP_08038594.1| putative D-arabinose 5-phosphate isomerase [Serratia symbiotica
           str. Tucson]
 gi|320031078|gb|EFW13081.1| putative D-arabinose 5-phosphate isomerase [Serratia symbiotica
           str. Tucson]
          Length = 328

 Score =  241 bits (614), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 134/311 (43%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+  +  +    F  A E I A +G+VV+ GIGKSGHIG K+A+T ASTGT S
Sbjct: 23  ECEGLAQLDRYIDAD----FTRACETITACRGKVVVMGIGKSGHIGRKIAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  IPLI +T+  +S + 
Sbjct: 79  FFVHPAEASHGDLGMVTAQDIVLAISNSGESNEILALIPVLKRQQIPLICMTNNPESTMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPQDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MHSGD IP V     L DA+  ++ K  G   + ++   + GI T+GD+
Sbjct: 199 GRRLLLRVNDIMHSGDEIPHVSTEASLRDALLEITHKNLGMTVICNDTMNIAGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    +LN   + D+M      +    L   A+ L++Q +I+ L+V D  Q  +G+V
Sbjct: 259 RRVFDMGINLNDAKIIDIMTPGGVRVHPSMLAVDALNLMQQRHITALLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|313673395|ref|YP_004051506.1| kpsf/gutq family protein [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940151|gb|ADR19343.1| KpsF/GutQ family protein [Calditerrivibrio nitroreducens DSM 19672]
          Length = 320

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/293 (44%), Positives = 183/293 (62%), Gaps = 3/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AVE I   +GRV++TG+GKSG IG K+A+T++STGTPS F+H AE  HGDLG+IT 
Sbjct: 28  NFEKAVEIILNCEGRVIVTGMGKSGLIGKKIAATMSSTGTPSIFLHPAEGVHGDLGVITS 87

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D II +S SG +DEL +IL   +   + +IA+     S +A  +D VL      E+CP 
Sbjct: 88  KDCIIAISNSGETDELISILPVIKMLGVKIIAMVGRIDSTLAKKSDCVLDASVIKEACPL 147

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAPT S  + LA+GDALA+ALL  R F + DF + HP G LG  L +   D+ H+G  +
Sbjct: 148 NLAPTASTTVALAMGDALAVALLNKRGFKKEDFAMFHPSGTLGKRLLIKVEDLYHTGSEL 207

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P+V+    + D+I  ++ K FGC  VVD+  KL GI+T+GD+ R   K  DL    V +V
Sbjct: 208 PVVRYDRTVADSIFEMTSKGFGCTTVVDDNGKLVGILTDGDLRRGMQKYRDLFEKKVYEV 267

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             KNPK I +D L   A+Q++   +I+ L++VDD  +  GI+H  D+L+ GI+
Sbjct: 268 CTKNPKTIEKDALAARALQVMENKSITSLVIVDDEGRPEGIIHIHDILKKGIV 320


>gi|323979086|gb|EGB74164.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
          Length = 328

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 130/302 (43%), Positives = 188/302 (62%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   ++  F  A EK+   KG+VV+ G+GKSGHIG K+A+T ASTGTPSFFVH  EA+
Sbjct: 28  AELDQYINQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAA 87

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A  AD+ L +
Sbjct: 88  HGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCV 147

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG LG  L +  +
Sbjct: 148 KVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVN 207

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+GD IP VK    L DA+  ++ K  G   + D+   ++GI T+GD+ R F    D
Sbjct: 208 DIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMIEGIFTDGDLRRVFDMGVD 267

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  LS+ DVM      +    L   A+ L++  +I+ +MV D     +G++H  DLLR G
Sbjct: 268 VRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADG-DHLLGVLHMHDLLRAG 326

Query: 340 II 341
           ++
Sbjct: 327 VV 328


>gi|85058182|ref|YP_453884.1| D-arabinose 5-phosphate isomerase [Sodalis glossinidius str.
           'morsitans']
 gi|84778702|dbj|BAE73479.1| putative isomerase [Sodalis glossinidius str. 'morsitans']
          Length = 328

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/311 (43%), Positives = 186/311 (59%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E +    G+VV+ G+GKSGHIG KLA+T ASTGTP+
Sbjct: 23  ERAGLAQLDQYINDD----FRRACEALFRCAGKVVVMGMGKSGHIGRKLAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM++  D++I LS SG S E+ A++   +R  IPLI +T + +S + 
Sbjct: 79  FFVHPGEASHGDLGMVSPQDIVIALSNSGESHEILALIPVLKRLHIPLICLTGKPESTMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A+I L +    E+CP GLAPT S    L +GDALA+ALL +R F+  DF + HPGG L
Sbjct: 139 KAAEIHLCVHVPEEACPLGLAPTASTTAALVMGDALAVALLRARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD +PL      L DA+  ++ K  G   + D    + GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHSGDEMPLTARTASLRDALLEITRKNLGMTVICDAQNVIVGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DL    + DVM      +  DTL   A+ L++  NI+ LMV  D    +G+V
Sbjct: 259 RRVFDMGIDLKEARIADVMTPGGVRVAPDTLAVEALNLIQARNITSLMVAQD-DHLLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G+I
Sbjct: 318 HMHDMLRAGVI 328


>gi|52425051|ref|YP_088188.1| GutQ protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307103|gb|AAU37603.1| GutQ protein [Mannheimia succiniciproducens MBEL55E]
          Length = 311

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 195/314 (62%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  EK  L+ L  +L       F+  ++ I    GR+VI GIGKSG IG K+ 
Sbjct: 4   LQNARETLATEKDALTLLSRNLDQ----SFNNVIDLILNCGGRLVIGGIGKSGLIGRKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKLIPSLKNFGNTIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A HAD VL +  E E+CP+ LAPTTSA++ LA+GDALA+AL+ +R+F   D
Sbjct: 120 LTGNKHSTLAKHADYVLDISVEREACPNNLAPTTSALVTLALGDALAVALINARHFQPMD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +  ++P+  +     D +TI++E R G VA+V E   
Sbjct: 180 FAKFHPGGSLGRRLLCRVKDQMQT--NLPVTALNTSFTDCLTIMNEGRMG-VALVMENDD 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N    LN ++ E +M  NPKVI +DT +  A   +++H I  L+
Sbjct: 237 LKGIITDGDIRRALAANGADTLNKVARE-LMTSNPKVINQDTYIGQAEDYMKEHRIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
           VVD+  K +G+V F
Sbjct: 296 VVDNDNKVVGLVEF 309


>gi|189425230|ref|YP_001952407.1| KpsF/GutQ family protein [Geobacter lovleyi SZ]
 gi|189421489|gb|ACD95887.1| KpsF/GutQ family protein [Geobacter lovleyi SZ]
          Length = 322

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 131/299 (43%), Positives = 184/299 (61%), Gaps = 5/299 (1%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           G L   F  AV+ I A  GRVV++G+GKSG +G K+AST+ASTGTP+FF+H AE  HGDL
Sbjct: 23  GRLDSSFEKAVQMILASSGRVVVSGMGKSGLVGQKIASTMASTGTPAFFLHPAEGIHGDL 82

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GMI   D++I +S SG ++EL  IL   +R    LIA++    S +A  +D+ L +    
Sbjct: 83  GMIMTGDVVIGISNSGETEELLRILPVIKRLGANLIAMSGNPASNLARSSDVFLDVSVAE 142

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP GLAPT+S    LA+GDALA+ALL  R F   DF + HPGG LG  L +   D+MH
Sbjct: 143 EACPLGLAPTSSTTATLAMGDALAVALLVERGFKAEDFAIFHPGGALGKKLLLRVEDLMH 202

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
            GDSIPLV+    + +A+ +++ K  G   V D   KL G+IT+GD+ R   +  + L  
Sbjct: 203 GGDSIPLVQEEMLMKEALFVITSKGLGITGVTDAQGKLTGVITDGDLRRCLERGEDILHS 262

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRFGI 340
           +   +M +NPK IL   L   A+QL+ +H+I+ L   +D   Q   G++H  D+L+ GI
Sbjct: 263 TAGSLMHRNPKRILRRELAAAALQLMERHSITTLFAFEDEQSQAPCGVIHLHDILKAGI 321


>gi|119469170|ref|ZP_01612154.1| D-arabinose 5-phosphate isomerase [Alteromonadales bacterium TW-7]
 gi|119447422|gb|EAW28690.1| D-arabinose 5-phosphate isomerase [Alteromonadales bacterium TW-7]
          Length = 323

 Score =  240 bits (613), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 202/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++  LR +  E++ LS +   +       FH A + I   +GR ++ G+GKSGHIG+K+A
Sbjct: 7   IEQGLRVLDIERQALSDIAQYV----DENFHQACQLIYDCQGRTIVIGMGKSGHIGNKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R    +IA
Sbjct: 63  ATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRLGAKMIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ + +  + E+C  GLAPT S    LA+GDA+A+ALLE+R F+ +D
Sbjct: 123 MTGNASSTMATLANVHICIKVQKEACSLGLAPTASTTATLAMGDAMAVALLEARGFTADD 182

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   DVMHSG + P++ +   + DA+  +S K  G  A+VD  Q+
Sbjct: 183 FALSHPGGSLGKRLLLTLKDVMHSGKNTPIINVTQTIKDALIEMSAKGLGMTAIVDSQQQ 242

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D++T  ++ VM K+     +D L   A+ ++ Q  I+ L++V
Sbjct: 243 LVGLFTDGDLRRILEQRIDIHTTQIDVVMTKSCTTATQDILAAEALNIMEQKRINGLIIV 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++    IG ++  DLL+ G++
Sbjct: 303 NEQNHPIGALNMQDLLKAGVL 323


>gi|290511574|ref|ZP_06550943.1| arabinose-5-phosphate isomerase [Klebsiella sp. 1_1_55]
 gi|289776567|gb|EFD84566.1| arabinose-5-phosphate isomerase [Klebsiella sp. 1_1_55]
          Length = 328

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 139/321 (43%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R ++  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A+L   +R  + LI 
Sbjct: 69  ATFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALLPVLKRQQVKLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 129 ITSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V +   L DA+  ++ K  G  AV D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAVCDDDMN 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V 
Sbjct: 249 IIGIFTDGDLRRVFDTGVDMRNASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G+VH  DLLR G++
Sbjct: 309 DG-DHLLGVVHMHDLLRAGVV 328


>gi|253997920|ref|YP_003049983.1| KpsF/GutQ family protein [Methylovorus sp. SIP3-4]
 gi|253984599|gb|ACT49456.1| KpsF/GutQ family protein [Methylovorus sp. SIP3-4]
          Length = 332

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 182/296 (61%), Gaps = 3/296 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  AVE I   +GR+V+TG+GKSGHIG+K+A+T ASTGTP+FFVH AEASH
Sbjct: 32  ALARRLDDSFTRAVELILQCQGRIVVTGMGKSGHIGNKIAATFASTGTPAFFVHPAEASH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT  D++I LS SG +DEL+ IL   +R    LI+IT   +S +A  AD+ L   
Sbjct: 92  GDLGMITGKDVVIALSNSGEADELRVILPTLKRMGARLISITGHPQSTLAKAADVSLDAH 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALAIA+++ R FS  +F + HPGG LG  L +   D
Sbjct: 152 VTEEACPLALAPTASTTASLALGDALAIAVMDQRGFSAEEFALSHPGGTLGRKLLLHVRD 211

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD+IP V +   L + +  +S K  G  A+VD  Q   G+ T+GD+ R F    D+
Sbjct: 212 VMRTGDAIPSVGVEASLKEGLLEMSRKGLGMTAIVDAEQHAVGVFTDGDLRRAFENAVDI 271

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N+  + DVM  +P+ I  + L   A+ ++    I+ L+V D     IG ++  DLL
Sbjct: 272 NSTYMRDVMHTSPQQIRPEQLAVDAVAIMEHKKITSLLVTDQQGTLIGALNMHDLL 327


>gi|331648997|ref|ZP_08350085.1| arabinose 5-phosphate isomerase [Escherichia coli M605]
 gi|331042744|gb|EGI14886.1| arabinose 5-phosphate isomerase [Escherichia coli M605]
          Length = 328

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPRDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|148557371|ref|YP_001264953.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
 gi|148502561|gb|ABQ70815.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
          Length = 334

 Score =  240 bits (612), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 128/310 (41%), Positives = 193/310 (62%), Gaps = 4/310 (1%)

Query: 34  EKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           E  G+ +   +LQ + L   F  AVE I A +GRVV++G+GKSGHI  K+A+T ASTGTP
Sbjct: 25  EVLGVEAQALTLQRDALDEDFARAVELILATQGRVVVSGMGKSGHIARKMAATFASTGTP 84

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           + FVH  EA+HGDLGM+   DL++VLS SG++ EL  I+ YAR    P++AI+++  S +
Sbjct: 85  AIFVHPGEAAHGDLGMLLAGDLLVVLSNSGATPELGPIMTYARDLGCPIVAISAQRHSPM 144

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  A   + LPK  E+CP  ++PTTS  + LA+GDALA+A +  R  +  +   LHPGG 
Sbjct: 145 ARLASAAIILPKVRETCPVNISPTTSTTLMLALGDALAVATMSMRGITRAELERLHPGGH 204

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G   +  +D+MH GD +PLV    P+ + + I++EK  G   V+D   +L G +T+GD+
Sbjct: 205 IGLRLLPINDIMHVGDRLPLVVATTPMREVLLIMTEKSLGIAGVLDGDGRLVGTVTDGDL 264

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIV 330
            RN  + LN+++  DVM ++PK + + T    A  +L  + I+ L V+D  +    IG++
Sbjct: 265 RRNIDRLLNSVA-GDVMTRHPKTVPDGTYAEDAKAILAANKITALFVMDHDRPDTPIGLI 323

Query: 331 HFLDLLRFGI 340
           H  D  R G+
Sbjct: 324 HIHDFNRIGM 333


>gi|330828000|ref|YP_004390952.1| putative sugar phosphate isomerase involved in capsule formation
           [Aeromonas veronii B565]
 gi|328803136|gb|AEB48335.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Aeromonas veronii B565]
          Length = 331

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 132/296 (44%), Positives = 188/296 (63%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  A E +    G++V+TG+GKSGHIGSK+A+TLASTGTP+FF+H  EASHGDLGM
Sbjct: 36  LNDAFDKACEMVLRCGGKIVVTGMGKSGHIGSKIAATLASTGTPAFFLHPGEASHGDLGM 95

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I+  DLII +S SG SDE+ A+L   +R  IPLI +T    S +A  A++ L +  E E+
Sbjct: 96  ISSGDLIIAISNSGESDEILALLPVLKRRGIPLICMTGNPASTMAKEANVHLCIKVEKEA 155

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP GLAPT+S    L +GDALA+ALLE+R F+ +DF + HPGG LG  L +   D+MHSG
Sbjct: 156 CPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFALSHPGGSLGKRLLLRVGDLMHSG 215

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSV 285
           D +P V I   +  A+  +S K  G  AVVD    L G+ T+GD+ R   +  D++   +
Sbjct: 216 DLLPRVGIDATISQALLEVSRKGLGMTAVVDGNGLLAGLFTDGDLRRILDQQIDIHHTPI 275

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             VM  N   +  + +   A++L+    I+ L+VVD+ ++ +G  +  DLL+ G+I
Sbjct: 276 SRVMTANCVTVGPEMMAAEAVKLMETRKINGLLVVDEEKRPLGAFNMHDLLKAGVI 331


>gi|260596173|ref|YP_003208744.1| D-arabinose 5-phosphate isomerase [Cronobacter turicensis z3032]
 gi|260215350|emb|CBA27344.1| Arabinose 5-phosphate isomerase [Cronobacter turicensis z3032]
          Length = 328

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 193/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K+A+TLASTGTPS
Sbjct: 23  ERAGLEHLDQYINAD----FARACESMFYCRGKVVVMGMGKSGHIGKKIAATLASTGTPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++  D++I +S SG S+E+ A++   +R  + LI +T   +S +A
Sbjct: 79  FFVHPAEASHGDLGMVSAQDIVIAISNSGESNEILALIPVLKRLQVQLICMTGRPESAMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+ G+ T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKIDGVFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DL+ + + DVM      +   TL   A+ L++  +I+ +MV D  Q   G++
Sbjct: 259 RRVFDMGGDLHQMKIVDVMTPGGIRVRPGTLAVDALNLMQSRHITSVMVADGDQLR-GVI 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|319955818|ref|YP_004167081.1| kpsf/gutq family protein [Nitratifractor salsuginis DSM 16511]
 gi|319418222|gb|ADV45332.1| KpsF/GutQ family protein [Nitratifractor salsuginis DSM 16511]
          Length = 331

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 131/293 (44%), Positives = 193/293 (65%), Gaps = 8/293 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AVE I A+KG++++TGIGKSG +G+K+A+TLASTGT SFF+H +EA HGDLGMI  +
Sbjct: 37  FVEAVESIYALKGKLIVTGIGKSGLVGAKIAATLASTGTSSFFLHPSEALHGDLGMIGPE 96

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D ++ +S+SG S+EL  IL + RRF IPL+A+T+   S +A +AD VL +  E E+CP G
Sbjct: 97  DGVLAISYSGESEELSNILPHIRRFGIPLLAMTAGKSSTLARYADTVLDISVEREACPLG 156

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
            APT S  + +A+GDALA+AL++ RNF + DF   HPGG LG  LFV  +D+M   D +P
Sbjct: 157 AAPTASTTLTMALGDALAVALMKKRNFKKEDFASFHPGGSLGRRLFVKVADLMRRED-LP 215

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDV 288
           +V+   PL +AI  +SE + G V +  EG +L+ I+++GD+ R   +   D+    V D 
Sbjct: 216 IVEAQTPLKEAIVTMSEGKLGNVLITREG-RLEAIMSDGDLRRALMRTDFDMER-PVIDY 273

Query: 289 MIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               PK I + +LL + A+ L+    + +L V+D+  +  G++H  DL+  GI
Sbjct: 274 ATPGPKAIRDTSLLASDALALIEAAKVQLLPVLDEEDRIHGVIHLHDLVSAGI 326


>gi|89890376|ref|ZP_01201886.1| sugar phosphate isomerase, KpsF/GutQ family, involved in capsule
           expression [Flavobacteria bacterium BBFL7]
 gi|89517291|gb|EAS19948.1| sugar phosphate isomerase, KpsF/GutQ family, involved in capsule
           expression [Flavobacteria bacterium BBFL7]
          Length = 321

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/324 (42%), Positives = 197/324 (60%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N+ ++ A R+I  E   + +LE+SL       F  AV  I   +GRV+ITGIGKS  I 
Sbjct: 4   ENNILEVAKRTIRIESAAVKNLENSLDS----AFAKAVNHIHTAQGRVIITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T+ STGTP+ F+HAA+A HGDLG+I ++D++I +S SG++ E+K ++   + F  
Sbjct: 60  MKIVATMNSTGTPAIFMHAADAIHGDLGIIQKNDVVICISKSGNTPEIKVLVPLIKNFEN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAITS   S +   AD VL  P E E+CP+GLAPTTS   QL +GDALAI LLE + F
Sbjct: 120 KLIAITSHQDSFLGKEADFVLHAPIEEEACPNGLAPTTSTTAQLVVGDALAICLLELKGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++ DF   HPGG LG         +   ++ P V     L D I  +SE R G   VVDE
Sbjct: 180 TDKDFARYHPGGALGKKLYLRVQELIDQNAKPQVTSNSTLRDVIVNISENRLGMTVVVDE 239

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GIIT+GD+ R     K++++L+  D+M  +PK I  D +   A +++ ++N+S L
Sbjct: 240 -TKLIGIITDGDLRRMLSTGKNIDSLTAADIMTTSPKTIDADDMAVQAREVMEEYNVSQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           + V+    A G+VH  DL+R GI+
Sbjct: 299 VAVNKDGYA-GVVHIHDLIREGIL 321


>gi|50119253|ref|YP_048420.1| D-arabinose 5-phosphate isomerase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609779|emb|CAG73213.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 357

 Score =  240 bits (612), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/337 (40%), Positives = 204/337 (60%), Gaps = 17/337 (5%)

Query: 13  RKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQ----FHCAVEKIKAIKGRV 67
           +K H L  +   Q A + +++ E+ GL+ L+  +    +      FHC        KG+V
Sbjct: 30  QKTHELPAHFDFQQAGKQVLSIERDGLAQLDQYIDDNFTLACKNIFHC--------KGKV 81

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+ G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+
Sbjct: 82  VVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEI 141

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L +GD
Sbjct: 142 LSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGD 201

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALA+ALL++R F+  DF + HPGG LG  L +  SD+MHSGD IP V     L DA+  +
Sbjct: 202 ALAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEI 261

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           + K  G   + +   K++GI T+GD+ R F  + DLN+  + DVM      +   TL   
Sbjct: 262 TRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVD 321

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A+ L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 322 ALNLMQSRHITSVLVAEN-DRLVGIVHMHDMLRAGVV 357


>gi|319779024|ref|YP_004129937.1| Arabinose 5-phosphate isomerase [Taylorella equigenitalis MCE9]
 gi|317109048|gb|ADU91794.1| Arabinose 5-phosphate isomerase [Taylorella equigenitalis MCE9]
          Length = 325

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/305 (44%), Positives = 195/305 (63%), Gaps = 6/305 (1%)

Query: 43  SSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           S+LQ    ++  +F  AVE I A KGRV++TGIGKSGH+  K+ASTL+STGT ++FVHAA
Sbjct: 21  SALQNIASKIGHEFIDAVELILARKGRVIVTGIGKSGHVARKIASTLSSTGTAAYFVHAA 80

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           EA HGDLGMIT+DD++I +S+SG S E   IL   +R    +IAIT   +S +A  ++IV
Sbjct: 81  EAIHGDLGMITKDDIVIAISYSGQSAEFATILPIIKRSGAQIIAITGGLESELAQISNIV 140

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFV 218
           L +  E E+CP GLAPTTS    +A+GDA+AIA L++  FS+ DF   HPGG LG  L  
Sbjct: 141 LNVKVEREACPMGLAPTTSTTATMAMGDAIAIACLKAMQFSDQDFARSHPGGALGRKLLT 200

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NF 276
             SD+M     +P+V +   +   +  +S K  G    +D+ QK KGI T+GD+ R    
Sbjct: 201 KVSDIMRPLHDLPIVSVDATMDQILKTMSSKTLGMACSIDDIQKPKGIFTDGDLRRLIQK 260

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           H D+ + ++  VM K+PK I ED + T A+ ++  ++I++L+V D+  K  G +H  DLL
Sbjct: 261 HGDVRSFTMSQVMSKSPKTISEDLMATEALNIMEAYSINLLLVTDEQGKLAGALHMQDLL 320

Query: 337 RFGII 341
           R  +I
Sbjct: 321 RSKVI 325


>gi|320174563|gb|EFW49699.1| Arabinose 5-phosphate isomerase [Shigella dysenteriae CDC 74-1112]
          Length = 328

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT++    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSTTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|200389284|ref|ZP_03215896.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199606382|gb|EDZ04927.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 328

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 133/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EKI    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKIFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|319425060|gb|ADV53134.1| arabinose-5-phosphate isomerase, KdsF [Shewanella putrefaciens 200]
          Length = 325

 Score =  239 bits (611), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 135/320 (42%), Positives = 202/320 (63%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGSKVIDIEKLALDNLYQYVD---SIEFVQACELILNCSGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAIPVIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  A I L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+  DF
Sbjct: 126 TGKPDSTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGFTREDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +   DVMHSG+ +PLV     + +A+  +S+K  G  AV+DE  KL
Sbjct: 186 AMSHPGGALGRKLLLRVRDVMHSGNELPLVNHDICITEALYEISKKGLGMTAVIDEQHKL 245

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R    ++N  T  + DVM +N   I +  L   A+Q++   NI+ L+V++
Sbjct: 246 VGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCITITDSALAAQALQVMDSKNINGLIVIN 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                IG ++ LDL++ G+I
Sbjct: 306 KDHHPIGALNMLDLVKAGVI 325


>gi|206576969|ref|YP_002236391.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae 342]
 gi|288933375|ref|YP_003437434.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|206566027|gb|ACI07803.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae 342]
 gi|288888104|gb|ADC56422.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
          Length = 328

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R ++  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  + LI 
Sbjct: 69  ATFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRQQVKLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 129 ITSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V +   L DA+  ++ K  G  AV D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAVCDDDMN 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V 
Sbjct: 249 IIGIFTDGDLRRVFDTGVDMRNASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G+VH  DLLR G++
Sbjct: 309 DG-DHLLGVVHMHDLLRAGVV 328


>gi|242281058|ref|YP_002993187.1| KpsF/GutQ family protein [Desulfovibrio salexigens DSM 2638]
 gi|242123952|gb|ACS81648.1| KpsF/GutQ family protein [Desulfovibrio salexigens DSM 2638]
          Length = 332

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/312 (43%), Positives = 194/312 (62%), Gaps = 15/312 (4%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+S+  SL       F  AVE +   KGRV+ITG+GKSG +G K+A+T++STGTPS
Sbjct: 20  EENGLASIRESLD----LNFAKAVEMLAGCKGRVIITGLGKSGLVGRKIAATMSSTGTPS 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  E +HGDLGM+  +D++I +S SG +DEL A+L   R F   +I+ITSE +S + 
Sbjct: 76  FFLHPVEGAHGDLGMVRTEDVVISISNSGETDELNALLPAIRSFGTQIISITSEIESTMG 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +DIV+      E+C HGLAPT+S    LAIGDALA+ L++ + F   DF   HPGG L
Sbjct: 136 RLSDIVIKTKVPCEACSHGLAPTSSTTAALAIGDALAVCLMDHKAFDSQDFKKFHPGGSL 195

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +C S++MH+ D+IP       L +A+T+L +   G VA+ D G+KL G+IT+GD+
Sbjct: 196 GRRLTLCISELMHT-DNIPAAAQDGTLAEALTVLDKGGLGLVALTD-GEKLSGVITDGDV 253

Query: 273 FR-----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            R     NF+     +S  +VMI+NP  I  D     A+ ++    I+VL VV++     
Sbjct: 254 RRLVCSGNFN---TQISAREVMIENPLRITPDMSAAQALDIMESKEITVLPVVNEEGMLT 310

Query: 328 GIVHFLDLLRFG 339
           G++H  DLL  G
Sbjct: 311 GMIHLHDLLGKG 322


>gi|156935721|ref|YP_001439637.1| D-arabinose 5-phosphate isomerase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156533975|gb|ABU78801.1| hypothetical protein ESA_03590 [Cronobacter sakazakii ATCC BAA-894]
          Length = 334

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 196/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K+A+
Sbjct: 20  QAGKEVLTIERAGLEQLDQYINAD----FARACESMFYCRGKVVVMGMGKSGHIGKKMAA 75

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH AEASHGDLGM++  D++I +S SG S+E+ A++   +R  + LI +
Sbjct: 76  TLASTGTPSFFVHPAEASHGDLGMVSAQDIVIAISNSGESNEILALIPVLKRLQVQLICM 135

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 136 TGRPESAMAKAADIHLCVKVPHEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 195

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 196 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKI 255

Query: 264 KGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +G+ T+GD+ R F    DL+ + + DVM      +   TL   A+ L++  +I+ +MV D
Sbjct: 256 EGVFTDGDLRRVFDMGGDLHQMKIVDVMTPGGIRVRPGTLAVDALNLMQSRHITSVMVAD 315

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q   G++H  DLLR G++
Sbjct: 316 GDQLR-GVIHMHDLLRAGVV 334


>gi|282599969|ref|ZP_05972542.2| arabinose 5-phosphate isomerase [Providencia rustigianii DSM 4541]
 gi|282567038|gb|EFB72573.1| arabinose 5-phosphate isomerase [Providencia rustigianii DSM 4541]
          Length = 326

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL +LE  +    +  F  A +KI + +G+VV+ G+GKSGHIG+K+A+TLASTGTPS
Sbjct: 21  EREGLKNLEQYI----NHDFDLACQKIFSCQGKVVVMGMGKSGHIGTKIAATLASTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+T  D+++ +S SG S E+ A+L   +R  +PLI +T+  +S + 
Sbjct: 77  FFVHPGEASHGDLGMVTDKDIVLAISNSGESGEILALLPVLKRIKVPLICMTNNPESSMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +ADI L +    E+CP GLAPTTS    L +GDALAIALL +R F+ +DF + HPGG L
Sbjct: 137 KYADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTARGFTADDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+M +GD IP +     L +A+  ++ K+ G   +  +   ++GI T+GD+
Sbjct: 197 GRKLLLLVRDLMSTGDDIPHISKSASLREALIEITRKKLGMTVICGDDMNIEGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + D+M      +    L   A+ L++  +++ L+V D   K +G++
Sbjct: 257 RRIFDMGIDLNNAKIADLMTPGGIRVAPGMLAVEALNLMQSRHVTSLLVADG-NKLVGVL 315

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 316 HMHDLLQAGVV 326


>gi|327479599|gb|AEA82909.1| sugar isomerase [Pseudomonas stutzeri DSM 4166]
          Length = 324

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 198/321 (61%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R+I  E   +  L + +  + SF   C  E I A KGRVV+ G+GKSGHIG K+A
Sbjct: 8   IETAQRTIRLEIEAVEQLNARI--DASFVQAC--ELILACKGRVVVVGMGKSGHIGRKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMIT DD+++ LS SG++ E+  +L   +R  I LI+
Sbjct: 64  ATLASTGTAAFFVHPAEASHGDMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGITLIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    SV+A  A + L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 124 MTGNPSSVLAKAAAVNLDASVAIEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +    VMH+G+ +P V+ G  L DA+  +++K  G   +V+   +
Sbjct: 184 FAFSHPGGALGRRLLLKVEHVMHTGERLPRVRRGTSLRDALLEMTQKGLGMTVIVETDGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+    +++VM  + K    + L   A++++  H IS L+V+
Sbjct: 244 LAGIFTDGDLRRALDKGVDVRQTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISSLVVI 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+ +  IG ++  DLLR G++
Sbjct: 304 DEQELPIGALNMHDLLRAGVM 324


>gi|42522385|ref|NP_967765.1| polysialic acid capsule expression protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574917|emb|CAE78758.1| polysialic acid capsule expression protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 326

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/317 (41%), Positives = 190/317 (59%), Gaps = 14/317 (4%)

Query: 35  KRGLSSLESSLQGELSFQ------FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           ++GL  LE   Q  L+ +      F   V+ I A  G++V+TG+GKSG I  KLAST +S
Sbjct: 6   QQGLKVLEVEAQAILALKERLGDSFEQVVKMITACDGKIVLTGMGKSGQIARKLASTFSS 65

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+ F+H AE+SHGDLG++  +D++I LS+ G S E   IL +  R  IPLIAIT + 
Sbjct: 66  TGTPAVFLHPAESSHGDLGLVENNDVVIALSYGGESPEFAGILRFVSRKGIPLIAITGKP 125

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  A + L +    E+CP GLAPT S+   LA+GDA+A+A++  + FS  DF   H
Sbjct: 126 ESSLAKAAQVTLNVHVSEEACPLGLAPTASSTATLAMGDAVAMAVMAEKGFSSEDFAEFH 185

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF-GCVAVVDEGQKLKGI 266
           PGG LG  L     DVMH GD++P V +  P+    +I++ K   G   +VDE   L G+
Sbjct: 186 PGGSLGYRLLTRVRDVMHGGDALPTVTLDTPIRQVFSIMTHKDVRGAAGIVDEKGDLVGV 245

Query: 267 ITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--- 321
           IT+GDI R   K  + L+   +D+M  NP+ I  + L   A+ ++ Q  I ++ V+D   
Sbjct: 246 ITDGDIRRRLEKSNDPLTGLAKDLMTTNPRTIDANELAEKALFVMEQFQIQMVFVLDKES 305

Query: 322 -DCQKAIGIVHFLDLLR 337
            + +K +GI+H  DLLR
Sbjct: 306 SNPRKPVGILHIQDLLR 322


>gi|253701215|ref|YP_003022404.1| KpsF/GutQ family protein [Geobacter sp. M21]
 gi|251776065|gb|ACT18646.1| KpsF/GutQ family protein [Geobacter sp. M21]
          Length = 322

 Score =  239 bits (611), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 139/323 (43%), Positives = 193/323 (59%), Gaps = 10/323 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI-KAIKGRVVITGIGKSGHIGSKL 82
           ++ A R I  E   L +LE+S+ G     F  AV  I  +  GRVV+TG+GKSG IG K+
Sbjct: 3   IEEAKRVIRVEAEALLNLEASING----AFEQAVRMILNSETGRVVVTGMGKSGLIGQKI 58

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LI
Sbjct: 59  ASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASLI 118

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F   
Sbjct: 119 AMAGNPASTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKAE 178

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG  L +   D+MHSG+++PLV     + +A+  ++ K  G   V  +  
Sbjct: 179 DFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDDG 238

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G+IT+GD+ R   K L+   L   ++M    K I  D L   A+Q + Q++I+ L V
Sbjct: 239 ALIGVITDGDLRRALGKGLDIINLPAAELMKAGAKRIRRDELAARALQQMEQYSITSLFV 298

Query: 320 VDD--CQKAIGIVHFLDLLRFGI 340
            DD   +  +GIVH  DLL+ GI
Sbjct: 299 FDDDKAKAPVGIVHLHDLLKAGI 321


>gi|238751357|ref|ZP_04612850.1| Arabinose 5-phosphate isomerase [Yersinia rohdei ATCC 43380]
 gi|238710415|gb|EEQ02640.1| Arabinose 5-phosphate isomerase [Yersinia rohdei ATCC 43380]
          Length = 366

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L   +  +    F  A E I + +G++V+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 61  EREGLAQLSQYINDD----FAAACEAIFSCRGKIVVMGMGKSGHIGCKIAATFASTGTPS 116

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +++  +S + 
Sbjct: 117 FFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIQLICMSNNPESTMG 176

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 177 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 236

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 237 GRKLLLRISDIMHTGDDIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 296

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D   K +G+V
Sbjct: 297 RRVFDMGVDLNHAKITDVMTSGGIRVPPTMLAVDALNLMESRHITAVLVADG-DKLLGVV 355

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 356 HMHDMLRAGVV 366


>gi|212711085|ref|ZP_03319213.1| hypothetical protein PROVALCAL_02154 [Providencia alcalifaciens DSM
           30120]
 gi|212686253|gb|EEB45781.1| hypothetical protein PROVALCAL_02154 [Providencia alcalifaciens DSM
           30120]
          Length = 326

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 193/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL +LE  +    +  F  A ++I   +G+VV+ G+GKSGHIG K+A+TLASTGTPS
Sbjct: 21  EREGLKNLEQYI----NHDFDRACQQIFTCQGKVVVMGMGKSGHIGRKIAATLASTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R  +PLI +T+   S + 
Sbjct: 77  FFVHPGEASHGDLGMITNKDIVLAISNSGESGEILALLPVLKRIKVPLICMTNNPDSNMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +AD+ L +    E+CP GLAPTTS    L +GDALAIALL +R F+ +DF + HPGG L
Sbjct: 137 KYADVHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTARGFTADDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+M +GD +P +     L +A+  ++ K+ G   + D+  K++GI T+GD+
Sbjct: 197 GRKLLLLVRDLMSTGDDVPHIPKSASLREALVEITRKKLGMTVICDDDMKIQGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + D+M      +    L   A+ L++  +++ L+V D  Q  +G++
Sbjct: 257 RRIFDMGIDLNNAKIADLMTPGGIRVAPGMLAVEALNLMQSRHVTSLLVADGDQ-LVGVL 315

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 316 HMHDLLQAGVV 326


>gi|82778511|ref|YP_404860.1| D-arabinose 5-phosphate isomerase [Shigella dysenteriae Sd197]
 gi|309785525|ref|ZP_07680156.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
 gi|81242659|gb|ABB63369.1| putative isomerase [Shigella dysenteriae Sd197]
 gi|308926645|gb|EFP72121.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
          Length = 328

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPSILAVEALNLMQFRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|161506122|ref|YP_001573234.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867469|gb|ABX24092.1| hypothetical protein SARI_04310 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 328

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQNFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRMHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKQASLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|300724967|ref|YP_003714292.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           nematophila ATCC 19061]
 gi|297631509|emb|CBJ92216.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           nematophila ATCC 19061]
          Length = 322

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+SLE  +  +    F  A E +   +G+V++ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 17  ELDGLTSLEQYINDD----FSQACELMFGCEGKVIVMGMGKSGHIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+T  DL++ +S SG S+E+ A++   +R  +PLI +T+ + S + 
Sbjct: 73  FFVHPGEASHGDLGMVTPKDLVLAISNSGESNEILALISVLKRQKVPLICMTNNDNSSMG 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALAIALL++R F+  DF + HPGG L
Sbjct: 133 KAADIHLCIKTPQEACPLGLAPTTSTTATLVMGDALAIALLQARGFTAEDFALSHPGGAL 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L + ASD+M +GD IP V     L +A+  ++ K+ G   + ++  +++GI T+GD+
Sbjct: 193 GRKLLLLASDLMATGDDIPRVSRTATLREALVEITRKKLGMTVICNDNMQIQGIFTDGDL 252

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      I  ++L   A+ L++  +I+ L+V +     +G++
Sbjct: 253 RRIFDMGIDLNNAKIADVMTAGGIRIKPNSLAVDALNLMQSRHITSLLVTEG-DTLLGVL 311

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 312 HMHDLLQAGVV 322


>gi|300718608|ref|YP_003743411.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299064444|emb|CAX61564.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 328

 Score =  239 bits (610), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 193/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++GL  L+  +  +    F  A ++I +  G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  ERQGLEQLDQYINDD----FTQACQRIFSCSGKVVVMGMGKSGHIGKKMAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++  D++I +S SG S E+ A++   +R  + LI +TS+ +S + 
Sbjct: 79  FFVHPAEASHGDLGMVSAGDIVIAISNSGESSEILALIPVLKRLHVSLICMTSKPESAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + ++  K++GI T+GD+
Sbjct: 199 GRKLLLTVNDIMHTGDEIPHVSREASLRDALLEITRKNMGMTVICNDLMKIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D  T  +  VM      +  + L   A+ L++  NI+V+MV D     +G+V
Sbjct: 259 RRVFDMGIDFQTADIASVMTSGGIRVRPNLLAVDALNLMQSRNITVVMVADG-DTLLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|284923219|emb|CBG36313.1| arabinose 5-phosphate isomerase [Escherichia coli 042]
          Length = 328

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +    +  F  A EK+   KG+VV+ G+GKSGHIG K++
Sbjct: 13  QQAGKEVLAIERECLAELDQYI----NQNFTLACEKMFWCKGKVVVMGMGKSGHIGRKMS 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|291326549|ref|ZP_06124963.2| arabinose 5-phosphate isomerase [Providencia rettgeri DSM 1131]
 gi|291313515|gb|EFE53968.1| arabinose 5-phosphate isomerase [Providencia rettgeri DSM 1131]
          Length = 326

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 193/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL +LE  +  +    F  A + I   +G+VV+ G+GKSGHIG K+A+TLASTGTPS
Sbjct: 21  EHEGLKNLEQYINTD----FDNACQLIFNCEGKVVVMGMGKSGHIGRKIAATLASTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R  +PLI +T+  +S + 
Sbjct: 77  FFVHPGEASHGDLGMITHKDVVLAISNSGESGEILALLPVLKRIKVPLICMTNNPESNMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +AD+ L +    E+CP GLAPTTS    L +GDALAIALL +R F+ NDF + HPGG L
Sbjct: 137 KYADVHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTARGFTANDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+M++GD IP +     L +A+  ++ K+ G   + D+   ++GI T+GD+
Sbjct: 197 GRKLLLLVRDLMNTGDEIPHIPKSASLREALVEITRKKLGMTVICDDDMNIEGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + D+M      +    L   A+ L++  +++ L+V +D  K +G++
Sbjct: 257 RRIFDMGIDLNNAKIADLMTPGGIRVSPTMLAVEALNLMQSRHVTSLLVAND-NKLVGVL 315

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 316 HMHDLLQAGVV 326


>gi|153869740|ref|ZP_01999274.1| polysialic acid capsule expression protein [Beggiatoa sp. PS]
 gi|152073796|gb|EDN70728.1| polysialic acid capsule expression protein [Beggiatoa sp. PS]
          Length = 326

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 189/302 (62%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   +   F  A E +   +GR+V+ G+GKSGHIG K+A+TLASTG+P+FFVH  EA 
Sbjct: 25  AELANRIDEAFVHACELMLKCEGRIVVIGMGKSGHIGGKIAATLASTGSPAFFVHPGEAC 84

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMIT  D+++VLS SG ++E+  IL   +R ++PL+ +T    S +A  A + + +
Sbjct: 85  HGDLGMITAKDVVLVLSNSGETEEIITILLLIKRLNVPLLTLTGNKTSTLALAATVNIDV 144

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG-GKLGTLFVCAS 221
             E E+CP GLAPT+S    L +GDALAIALLE++ FS +DF   HP       L +  S
Sbjct: 145 SVEKEACPLGLAPTSSTTAALVMGDALAIALLEAKGFSADDFARSHPKGRLGRRLLLLVS 204

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+G+ IP V     L DA+  ++ K  G   + D+  K+ GI T+GD+ R   K  D
Sbjct: 205 DIMHTGEEIPSVPPTATLRDALVEMTRKGLGMTTIADKELKIHGIFTDGDLRRVLDKKCD 264

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L++  + DVM  + K ++ D L   A+ L++ H I+VL++VD+    +GI+H  D+LR G
Sbjct: 265 LHSTIISDVMTAHCKTVVADCLAVEALSLMQSHKITVLLIVDNTHTLVGILHIHDILRAG 324

Query: 340 II 341
           ++
Sbjct: 325 VV 326


>gi|218550480|ref|YP_002384271.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|218358021|emb|CAQ90667.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|324115199|gb|EGC09163.1| KpsF/GutQ family protein sugar isomerase [Escherichia fergusonii
           B253]
          Length = 328

 Score =  239 bits (610), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 194/321 (60%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+ GL+ L+  +       F  A EK+    G+V++ G+GKSGHIG K+A
Sbjct: 13  QKAGKEVLAIEREGLADLDQYIDQ----NFTLACEKLFWCTGKVIVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTSQDVVIAISNSGESSEIAALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPDSSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+MH+GD IP V     L DA+  ++ K  G   + D+  K
Sbjct: 189 FALSHPGGALGRKLLLRVSDIMHTGDEIPHVTKNASLRDALLEITRKNLGMTVICDDNMK 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V 
Sbjct: 249 IDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|157148768|ref|YP_001456087.1| D-arabinose 5-phosphate isomerase [Citrobacter koseri ATCC BAA-895]
 gi|157085973|gb|ABV15651.1| hypothetical protein CKO_04600 [Citrobacter koseri ATCC BAA-895]
          Length = 328

 Score =  239 bits (609), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EKI +  G+VV+ G+GKSGHIG K+A+T ASTGT +
Sbjct: 23  EREGLAELDQYIDQ----NFTLACEKIFSCTGKVVVMGMGKSGHIGRKMAATFASTGTSA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S+E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTSQDVVIAISNSGESNEIAALIPVLKRLQVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+ GI T+GD+
Sbjct: 199 GRKLLLRVNDIMHTGDEIPHVNKNASLRDALLEITRKNLGMTVICDDTMKIDGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVNALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|26249783|ref|NP_755823.1| D-arabinose 5-phosphate isomerase [Escherichia coli CFT073]
 gi|26110211|gb|AAN82397.1|AE016767_157 Hypothetical protein yrbH [Escherichia coli CFT073]
          Length = 335

 Score =  239 bits (609), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 20  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 75

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 76  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 135

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 136 ITGCPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 195

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 196 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 255

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 256 IEGIFTDGDLRRVFDMGVDVRRLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 315

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 316 DG-DHLLGVLHMHDLLRAGVV 335


>gi|208779870|ref|ZP_03247214.1| arabinose 5-phosphate isomerase [Francisella novicida FTG]
 gi|208744325|gb|EDZ90625.1| arabinose 5-phosphate isomerase [Francisella novicida FTG]
          Length = 323

 Score =  239 bits (609), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 204/322 (63%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  KGRV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KGRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  +I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHLNI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNDHNILGIVTMHDLIKL 320


>gi|120434955|ref|YP_860641.1| sugar binding/sugar isomerase domain-containing proteins [Gramella
           forsetii KT0803]
 gi|117577105|emb|CAL65574.1| protein containing SIS and KpsF/GutQ sugar binding or sugar
           isomerase domains [Gramella forsetii KT0803]
          Length = 321

 Score =  239 bits (609), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 203/326 (62%), Gaps = 10/326 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           + +  +  A  +I  E   +++LE+ +  E    F  AVE I   +GRVV+TGIGKS  I
Sbjct: 3   LSDQIISTAKETISNEADAIANLENFIDEE----FTKAVEIIYKSEGRVVVTGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +K+ +TL STGTPS F+HAA+A HGDLG++  DD++I +S SG+S E++ ++   + F+
Sbjct: 59  ANKIVATLNSTGTPSIFMHAADAIHGDLGIVQNDDIVICISKSGTSPEIQVLVPLIKNFN 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T   +S +   AD VL    E E+CP+ LAPTTS   Q+ IGDALA+ LL  R 
Sbjct: 119 NTLIALTGNRESFLGKEADFVLNCYVEKEACPNNLAPTTSTTAQMVIGDALAVCLLNLRG 178

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS  DF   HPGG LG  L++  SD+  S + IP V     + +AI  +SEK  G  AV+
Sbjct: 179 FSSKDFAKYHPGGSLGKKLYLRVSDIT-SQNMIPQVSPDTDVANAIIEISEKMLGVTAVL 237

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E  ++ GIIT+GDI R    H+++  L  +D+M +NPK I +DTL   A+ +L +H IS
Sbjct: 238 -ENDEIVGIITDGDIRRMLKDHQEIKGLKAKDIMSENPKTIEQDTLAVEALDVLEKHQIS 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+ V++ + A G+VH  +L+R GI+
Sbjct: 297 QLLAVENGKYA-GVVHIHNLIREGIL 321


>gi|251791368|ref|YP_003006089.1| D-arabinose 5-phosphate isomerase [Dickeya zeae Ech1591]
 gi|247539989|gb|ACT08610.1| KpsF/GutQ family protein [Dickeya zeae Ech1591]
          Length = 328

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 200/321 (62%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R +++ E+  L+ L+  +       F  A EK+   +G+VV+ G+GKSGHIG K+A
Sbjct: 13  QSAGRQVLSIERDSLAQLDQYIDD----NFSQACEKMFYCRGKVVVMGMGKSGHIGCKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI 
Sbjct: 69  ATFASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 MTGNPESTMAKAADIHLCVHVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+MH+GD IP V     L DA+  ++ K  G   +  +  +
Sbjct: 189 FALSHPGGALGRKLLLRISDIMHTGDEIPRVSRDASLRDALLEITRKNLGMTVICGQDDR 248

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F  + +LN+  + DVM +    +   TL   A+ L++  +I+ L+V 
Sbjct: 249 IEGIFTDGDLRRVFDMNINLNSAGIADVMTRGGIRVTPHTLAVDALNLMQSRHITSLLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  + +GIVH  D+LR G++
Sbjct: 309 EN-DRLLGIVHMHDMLRAGVV 328


>gi|325498778|gb|EGC96637.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ECD227]
          Length = 335

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 194/321 (60%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+ GL+ L+  +       F  A EK+    G+V++ G+GKSGHIG K+A
Sbjct: 20  QKAGKEVLAIEREGLADLDQYIDQ----NFTLACEKLFWCTGKVIVMGMGKSGHIGRKMA 75

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 76  ATFASTGTPSFFVHPGEAAHGDLGMVTSQDVVIAISNSGESSEIAALIPVLKRLHVPLIC 135

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 136 ITGRPDSSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 195

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+MH+GD IP V     L DA+  ++ K  G   + D+  K
Sbjct: 196 FALSHPGGALGRKLLLRVSDIMHTGDEIPHVTKNASLRDALLEITRKNLGMTVICDDNMK 255

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V 
Sbjct: 256 IDGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVLVA 315

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 316 DG-DHLLGVLHMHDLLRAGVV 335


>gi|332978300|gb|EGK15028.1| arabinose 5-phosphate isomerase [Psychrobacter sp. 1501(2011)]
          Length = 332

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 125/299 (41%), Positives = 192/299 (64%), Gaps = 7/299 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L  +F  A E I+  +GRVV+TG+GKSGHIG K+A+T ASTG+P+FF+H  EA HGDLG
Sbjct: 34  QLDDRFVEACELIRNCQGRVVVTGMGKSGHIGRKIAATFASTGSPAFFMHPGEAGHGDLG 93

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+   D+++ +S SG SDE+K +L   ++ SIPLI+I+ + + ++   AD+ LTL    E
Sbjct: 94  MLVAGDVLLAISNSGESDEIKTLLPVVKQLSIPLISISRDRRGMLPKSADVALTLGASEE 153

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+S    LA+GDA+A+AL+ +R+F+  DF + HP G LG  L +  SD+MH 
Sbjct: 154 ACPLGLAPTSSTTATLALGDAIAVALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQ 213

Query: 227 GD---SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
            +    +PLV     L +A+ +++  R G   VVD+  ++ GI T+GD+ R   K  DL 
Sbjct: 214 SEKDLKLPLVSTDTSLHNALFVMTNGRLGMAVVVDDENRVVGIFTDGDLRRCLEKHIDLE 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T  + ++M  NPK + +    + A+ L+ +  IS L++VD+ Q+  G++   DLL  G+
Sbjct: 274 T-PMSEIMTPNPKQVSKTMRASDALSLMNEKAISQLLIVDENQQLEGVISIHDLLHAGV 331


>gi|332970451|gb|EGK09443.1| arabinose 5-phosphate isomerase [Kingella kingae ATCC 23330]
          Length = 321

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 129/280 (46%), Positives = 182/280 (65%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GR ++ G+GKSGHIG K+A+TLASTGTP+FFVH AEA+HGDLGMI  +D+++ LS SG S
Sbjct: 43  GRTIVMGMGKSGHIGRKIAATLASTGTPAFFVHPAEAAHGDLGMILDNDVVLALSNSGES 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           DE+ AIL   +R    LI ITS  +S +A +ADI +      E+CP GLAPT+S    LA
Sbjct: 103 DEILAILPALKRKHTTLICITSNPQSSMARYADIHIQAKVSQEACPLGLAPTSSTTAVLA 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALAI LL++R F+  DF + HP G LG  L +   D+MH GD++P V    PL DAI
Sbjct: 163 LGDALAIVLLKARQFTPEDFALSHPAGNLGRRLLLTVRDLMHQGDALPAVLQHTPLRDAI 222

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTL 301
             +SEK  G V ++DE   L G+ T+GD+ R F  H+ +   ++++VM   P  I  D L
Sbjct: 223 LTMSEKGLGMVGIIDEQSSLHGVFTDGDLRRLFAQHERVGIFTIDEVMKTQPCTISPDKL 282

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + A++L++   I+ L+V +   K +G ++  DLL+  +I
Sbjct: 283 ASEALKLMQDKRINGLLVCEHG-KLVGALNMYDLLKARVI 321


>gi|227887918|ref|ZP_04005723.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|300990927|ref|ZP_07179379.1| arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|301047956|ref|ZP_07195001.1| arabinose 5-phosphate isomerase [Escherichia coli MS 185-1]
 gi|37079479|sp|Q8FD73|KDSD_ECOL6 RecName: Full=Arabinose 5-phosphate isomerase
 gi|227835314|gb|EEJ45780.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|300300188|gb|EFJ56573.1| arabinose 5-phosphate isomerase [Escherichia coli MS 185-1]
 gi|300407003|gb|EFJ90541.1| arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|307555290|gb|ADN48065.1| D-arabinose 5-phosphate isomerase [Escherichia coli ABU 83972]
 gi|315294857|gb|EFU54196.1| arabinose 5-phosphate isomerase [Escherichia coli MS 153-1]
          Length = 328

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGCPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV 
Sbjct: 249 IEGIFTDGDLRRVFDMGVDVRRLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G++H  DLLR G++
Sbjct: 309 DG-DHLLGVLHMHDLLRAGVV 328


>gi|53804948|ref|YP_113249.1| sugar isomerase, KpsF/GutQ [Methylococcus capsulatus str. Bath]
 gi|53758709|gb|AAU93000.1| sugar isomerase, KpsF/GutQ [Methylococcus capsulatus str. Bath]
          Length = 330

 Score =  239 bits (609), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 132/303 (43%), Positives = 190/303 (62%), Gaps = 6/303 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L   +   F      I    GRVV+TG+GKSGHIG K+ASTLASTGTP+FFV+  EA 
Sbjct: 30  SALADRIDSNFAAGCRLILGCHGRVVVTGMGKSGHIGGKIASTLASTGTPAFFVNPGEAC 89

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMITR+D+++ LS SG + EL  IL   +R  IPLIA+T    S +A  + I L  
Sbjct: 90  HGDLGMITRNDVVLALSNSGETAELLTILPLIKRLGIPLIAMTGNRLSTLARQSSIHLDT 149

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             + E+CP GLAPT+S    LA+GDALA+ALLE+R F+  DF   HPGG LG  L     
Sbjct: 150 GVQQEACPLGLAPTSSTTAALAMGDALAVALLEARGFTREDFAFSHPGGSLGRRLLTFVR 209

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+GD  P++ +   + DA+  ++ K+ G  A+VD    ++G+ T+GD+ R   K  D
Sbjct: 210 DIMHTGDDTPVIGLEASVRDALLEMTAKKLGMTAIVDGAGTIQGVFTDGDLRRLLEKAQD 269

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++   +  VM ++  V +E +LL   A++++ Q  I+ L VV++  + IG ++  DLLR 
Sbjct: 270 IHATPITAVMTRS-CVTVEGSLLAAEAVRIMEQKRINALPVVEN-GRLIGAINMHDLLRA 327

Query: 339 GII 341
           G++
Sbjct: 328 GVL 330


>gi|330839372|ref|YP_004413952.1| KpsF/GutQ family protein [Selenomonas sputigena ATCC 35185]
 gi|329747136|gb|AEC00493.1| KpsF/GutQ family protein [Selenomonas sputigena ATCC 35185]
          Length = 326

 Score =  239 bits (609), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 133/330 (40%), Positives = 198/330 (60%), Gaps = 11/330 (3%)

Query: 19  MKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK   + + A+ ++  E   +  L  S+  E    F  AVE +     R+V+TG+GKSGH
Sbjct: 1   MKRDVIWEKAVETLSMEAAAVKKLTESVDEE----FCRAVECVLDCTARIVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTPSFF+H AEA HGDLGM+T  D+++ +S SG   E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAISNSGEVQEVVKILPVIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A ++D V+ +  EPE+CP GLAPTTS    LA+GDA+A+A++  R
Sbjct: 117 GATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTSTTATLAMGDAIAVAVMSVR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NF + DF + HPGG LG  L +   DVMH+G+  P+V       DA+ +++EK  G V+V
Sbjct: 177 NFKKQDFALFHPGGALGRRLLLKVQDVMHTGEENPVVSGEKTAKDALFVMTEKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
            D   +  G++T+G I R   KD   L   V ++M   P  I  D L T A+ ++ +H  
Sbjct: 237 TDAAGRFIGLLTDGIIRRALAKDYAFLDEPVHEIMFTEPLTIHADELATAALSVMEKHEP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+D+    +G++H  DLL+ G++
Sbjct: 297 RPVTVLPVIDEKGAPVGMIHLTDLLKQGVV 326


>gi|168231926|ref|ZP_02656984.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194470546|ref|ZP_03076530.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197250012|ref|YP_002148240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|194456910|gb|EDX45749.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197213715|gb|ACH51112.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|205333900|gb|EDZ20664.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|322615319|gb|EFY12240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618322|gb|EFY15213.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622873|gb|EFY19717.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626805|gb|EFY23602.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631374|gb|EFY28134.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635359|gb|EFY32073.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643358|gb|EFY39922.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647070|gb|EFY43571.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648873|gb|EFY45318.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655065|gb|EFY51376.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657668|gb|EFY53936.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664164|gb|EFY60362.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667447|gb|EFY63609.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674695|gb|EFY70787.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675672|gb|EFY71745.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682308|gb|EFY78331.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684911|gb|EFY80909.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195884|gb|EFZ81055.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199001|gb|EFZ84098.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204299|gb|EFZ89308.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207646|gb|EFZ92593.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211301|gb|EFZ96145.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214757|gb|EFZ99506.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221237|gb|EGA05663.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224022|gb|EGA08315.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230329|gb|EGA14448.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233305|gb|EGA17399.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239342|gb|EGA23392.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242407|gb|EGA26433.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246917|gb|EGA30883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254150|gb|EGA37970.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255267|gb|EGA39044.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262730|gb|EGA46286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264040|gb|EGA47548.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269426|gb|EGA52881.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 328

 Score =  238 bits (608), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|126175858|ref|YP_001052007.1| KpsF/GutQ family protein [Shewanella baltica OS155]
 gi|152999230|ref|YP_001364911.1| KpsF/GutQ family protein [Shewanella baltica OS185]
 gi|160873843|ref|YP_001553159.1| KpsF/GutQ family protein [Shewanella baltica OS195]
 gi|217971903|ref|YP_002356654.1| KpsF/GutQ family protein [Shewanella baltica OS223]
 gi|125999063|gb|ABN63138.1| KpsF/GutQ family protein [Shewanella baltica OS155]
 gi|151363848|gb|ABS06848.1| KpsF/GutQ family protein [Shewanella baltica OS185]
 gi|160859365|gb|ABX47899.1| KpsF/GutQ family protein [Shewanella baltica OS195]
 gi|217497038|gb|ACK45231.1| KpsF/GutQ family protein [Shewanella baltica OS223]
 gi|315266070|gb|ADT92923.1| KpsF/GutQ family protein [Shewanella baltica OS678]
          Length = 325

 Score =  238 bits (608), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 205/325 (63%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG
Sbjct: 4   KSQLRQWGCKVIDIEKSALDNLYQYVD---SAEFAEACELILNCTGKVIVMGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG++  +D+I+ +S SG S E+  ++   +R  +
Sbjct: 61  NKISATLASTGTPAFFVHPGEASHGDLGVLADNDVILAISNSGESSEILTLMPVIQRMGV 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T + +S +A  + + L +    E+CP GLAPT+S    L +GDA+AIALL+++ F
Sbjct: 121 PVIAVTGKPESNMARLSKVHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGF 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG  L +   DVMHSGD +PLV     + +A+  +S+K  G  A++D
Sbjct: 181 TRDDFAMSHPGGALGRKLLLKVCDVMHSGDDLPLVNHDICITEALYEISKKGLGMTAIID 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + +KL GI T+GD+ R    ++N  T  + DVM +N   I +  L   A+Q++   NI+ 
Sbjct: 241 DQRKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCVTITDGVLAAQALQVMDSKNING 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+D  +  IG ++ LD+++ G+I
Sbjct: 301 LIVIDKDRHPIGALNMLDMVKAGVI 325


>gi|304411206|ref|ZP_07392821.1| KpsF/GutQ family protein [Shewanella baltica OS183]
 gi|307306501|ref|ZP_07586244.1| KpsF/GutQ family protein [Shewanella baltica BA175]
 gi|304350399|gb|EFM14802.1| KpsF/GutQ family protein [Shewanella baltica OS183]
 gi|306910792|gb|EFN41220.1| KpsF/GutQ family protein [Shewanella baltica BA175]
          Length = 359

 Score =  238 bits (608), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 131/325 (40%), Positives = 205/325 (63%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG
Sbjct: 38  KSQLRQWGCKVIDIEKSALDNLYQYVD---SAEFAEACELILNCTGKVIVMGMGKSGHIG 94

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG++  +D+I+ +S SG S E+  ++   +R  +
Sbjct: 95  NKISATLASTGTPAFFVHPGEASHGDLGVLADNDVILAISNSGESSEILTLMPVIQRMGV 154

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T + +S +A  + + L +    E+CP GLAPT+S    L +GDA+AIALL+++ F
Sbjct: 155 PVIAVTGKPESNMARLSKVHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGF 214

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG  L +   DVMHSGD +PLV     + +A+  +S+K  G  A++D
Sbjct: 215 TRDDFAMSHPGGALGRKLLLKVCDVMHSGDDLPLVNHDICITEALYEISKKGLGMTAIID 274

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + +KL GI T+GD+ R    ++N  T  + DVM +N   I +  L   A+Q++   NI+ 
Sbjct: 275 DQRKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCVTITDGVLAAQALQVMDSKNING 334

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+D  +  IG ++ LD+++ G+I
Sbjct: 335 LIVIDKDRHPIGALNMLDMVKAGVI 359


>gi|88704069|ref|ZP_01101784.1| arabinose 5-phosphate isomerase [Congregibacter litoralis KT71]
 gi|88701896|gb|EAQ99000.1| arabinose 5-phosphate isomerase [Congregibacter litoralis KT71]
          Length = 325

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 135/318 (42%), Positives = 195/318 (61%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R+I  E   +++LE+ + GE   +F  A E I  + GR V+TG+GKSGH+G K+A+TL
Sbjct: 11  AQRTIRMEVEAVAALEARV-GE---EFERACELILKVPGRTVVTGMGKSGHVGGKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGD+GMIT DD +I LS SG++ E+  ++   +R  IPLI++T 
Sbjct: 67  ASTGTPAFFVHPGEASHGDMGMITADDCVIALSNSGTTPEVLMLIPLLKRLGIPLISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  +D  +      E+CP  LAPT+S    L +GDALAIALLE+R F+  DF  
Sbjct: 127 APDSALAKASDAHINTGVAVEACPLDLAPTSSTTTALVMGDALAIALLEARGFTAEDFAF 186

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLK 264
            HPGG LG  L +   DVM  G+ IP V    PL DA+  +S K  G   VV  +  +L 
Sbjct: 187 SHPGGALGRKLLLKIDDVMRQGEGIPKVSEATPLSDALLEISAKGLGMTTVVAADSDRLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+ T+GD+ R   +  D+    + D+M ++P  +    L   A++++ + +IS L+V+D+
Sbjct: 247 GVFTDGDLRRALDEQVDIKGTRIGDIMTRSPATVHTGMLAAEALRIMEERHISALVVLDE 306

Query: 323 CQKAIGIVHFLDLLRFGI 340
            Q+  G+V+ L LL  GI
Sbjct: 307 QQEIAGVVNLLALLEAGI 324


>gi|162418897|ref|YP_001605694.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Angola]
 gi|162351712|gb|ABX85660.1| arabinose 5-phosphate isomerase [Yersinia pestis Angola]
          Length = 342

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 37  EREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 92

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI ++S  +S + 
Sbjct: 93  FFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSSNPESTMG 152

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 153 KAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 212

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++KGI T+GD+
Sbjct: 213 GRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDL 272

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D  Q  +G+V
Sbjct: 273 RRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVADGDQ-LLGVV 331

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 332 HMHDMLRAGVV 342


>gi|261819640|ref|YP_003257746.1| D-arabinose 5-phosphate isomerase [Pectobacterium wasabiae WPP163]
 gi|261603653|gb|ACX86139.1| KpsF/GutQ family protein [Pectobacterium wasabiae WPP163]
          Length = 345

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 137/343 (39%), Positives = 208/343 (60%), Gaps = 12/343 (3%)

Query: 6   SHFKSVTRKG---HSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIK 61
           +H K  + +    H L  +   Q A + +++ E+ GL+ L+  +       F  A +KI 
Sbjct: 8   AHLKQQSDRALSEHRLQPDFDFQQAGKQVLSIERDGLAQLDQYIDDN----FTLACKKIF 63

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +G+VV+ G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S S
Sbjct: 64  NCQGKVVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNS 123

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G S E+ +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS   
Sbjct: 124 GESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTA 183

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLI 240
            L +GDALA+ALL++R F+  DF + HPGG LG  L +  SD+MHSGD IP V     L 
Sbjct: 184 TLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRISDIMHSGDEIPHVSHDASLR 243

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILE 298
           DA+  ++ K  G   + +   K++GI T+GD+ R F  + DLN+  + DVM      +  
Sbjct: 244 DALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAP 303

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L   A+ L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 304 NMLAVDALNLMQSRHITSVLVAEN-DRLVGIVHMHDMLRAGVV 345


>gi|238758311|ref|ZP_04619489.1| Arabinose 5-phosphate isomerase [Yersinia aldovae ATCC 35236]
 gi|238703434|gb|EEP95973.1| Arabinose 5-phosphate isomerase [Yersinia aldovae ATCC 35236]
          Length = 334

 Score =  238 bits (608), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L   +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 29  EREGLAQLGQYINDD----FAKACETIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 84

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+TR D+++ +S SG S+E+ A++   +R  IPLI +++  +S + 
Sbjct: 85  FFVHPGEASHGDLGMVTRQDIVLAISNSGESNEILALIPVLKRQRIPLICMSNNPESTMG 144

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 145 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 204

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP +     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 205 GRKLLLRISDIMHTGADIPHISPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 264

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ L+V D  Q  +G+V
Sbjct: 265 RRVFDMGIDLNNAKIADVMTGGGIRVRPTMLAVDALNLMESRHITALLVADGDQ-LLGVV 323

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 324 HMHDMLRAGVV 334


>gi|152972121|ref|YP_001337267.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262042757|ref|ZP_06015911.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329997613|ref|ZP_08302882.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
 gi|150956970|gb|ABR79000.1| putative isomerase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|259039982|gb|EEW41099.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328538954|gb|EGF65007.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
          Length = 334

 Score =  238 bits (608), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 137/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R ++  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A
Sbjct: 19  QQAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMA 74

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  + LI 
Sbjct: 75  ATFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRQQVKLIC 134

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 135 ITSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAED 194

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V +   L DA+  ++ K  G  A+ D+   
Sbjct: 195 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMN 254

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V 
Sbjct: 255 IIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVA 314

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G+VH  DLLR G++
Sbjct: 315 DG-DHLLGVVHMHDLLRAGVV 334


>gi|77361461|ref|YP_341036.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876372|emb|CAI87594.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 323

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 124/327 (37%), Positives = 206/327 (62%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K S ++  LR +  E++ L  ++  +       FH A + +    GR++I G+GKSGH
Sbjct: 1   MTKLSFIEQGLRVLDIERQALFDIKQYVDDN----FHQACQLMYDCSGRIIIIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R 
Sbjct: 57  IGHKIAATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I++T   +S +A  A++ + +  E E+C  GLAPT S    LA+GDA+A+ALLE+R
Sbjct: 117 GAKIISMTGNTQSTMATLANVHVCIKVEKEACSLGLAPTASTTATLAMGDAMAVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG  L +   DVMHSG + P++     + DA+  ++ K  G  A+
Sbjct: 177 GFTADDFALSHPGGSLGKRLLLTLKDVMHSGVNTPIITTSQTIKDALIEMTAKGLGMTAI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD+ Q+L G+ T+GD+ R   +  D++T S++ VM K+     +D L   A+ ++    I
Sbjct: 237 VDDNQQLAGLFTDGDLRRILEQRVDIHTTSIDAVMTKSCTTATQDMLAAQALNIMEHKRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+++++  + IG ++  DLL+ G++
Sbjct: 297 NGLIIINEHNQPIGALNMQDLLKAGVL 323


>gi|51597813|ref|YP_072004.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           32953]
 gi|153948490|ref|YP_001399439.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           31758]
 gi|153997352|ref|ZP_02022452.1| arabinose 5-phosphate isomerase [Yersinia pestis CA88-4125]
 gi|165928116|ref|ZP_02223948.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937422|ref|ZP_02225985.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011373|ref|ZP_02232271.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211854|ref|ZP_02237889.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400660|ref|ZP_02306169.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167420789|ref|ZP_02312542.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167426740|ref|ZP_02318493.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167470179|ref|ZP_02334883.1| D-arabinose 5-phosphate isomerase [Yersinia pestis FV-1]
 gi|218930589|ref|YP_002348464.1| D-arabinose 5-phosphate isomerase [Yersinia pestis CO92]
 gi|229836867|ref|ZP_04457032.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides A]
 gi|229839233|ref|ZP_04459392.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229899798|ref|ZP_04514939.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904113|ref|ZP_04519224.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|270488548|ref|ZP_06205622.1| arabinose 5-phosphate isomerase [Yersinia pestis KIM D27]
 gi|294505301|ref|YP_003569363.1| hypothetical protein YPZ3_3192 [Yersinia pestis Z176003]
 gi|37079460|sp|Q8D1Q8|KDSD_YERPE RecName: Full=Arabinose 5-phosphate isomerase
 gi|51591095|emb|CAH22759.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349200|emb|CAL22165.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288989|gb|EDM39069.1| arabinose 5-phosphate isomerase [Yersinia pestis CA88-4125]
 gi|152959985|gb|ABS47446.1| arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           31758]
 gi|165914527|gb|EDR33141.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919890|gb|EDR37191.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989757|gb|EDR42058.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206600|gb|EDR51080.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166961595|gb|EDR57616.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050028|gb|EDR61436.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167054267|gb|EDR64088.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229678231|gb|EEO74336.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|229687290|gb|EEO79365.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229695599|gb|EEO85646.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705810|gb|EEO91819.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides A]
 gi|262363364|gb|ACY60085.1| hypothetical protein YPD4_3181 [Yersinia pestis D106004]
 gi|262367258|gb|ACY63815.1| hypothetical protein YPD8_3145 [Yersinia pestis D182038]
 gi|270337052|gb|EFA47829.1| arabinose 5-phosphate isomerase [Yersinia pestis KIM D27]
 gi|294355760|gb|ADE66101.1| hypothetical protein YPZ3_3192 [Yersinia pestis Z176003]
 gi|320017119|gb|ADW00691.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 328

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI ++S  +S + 
Sbjct: 79  FFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSSNPESTMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 KAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++KGI T+GD+
Sbjct: 199 GRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D  Q  +G+V
Sbjct: 259 RRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|22124068|ref|NP_667491.1| D-arabinose 5-phosphate isomerase [Yersinia pestis KIM 10]
 gi|45443563|ref|NP_995102.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809717|ref|YP_653633.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Antiqua]
 gi|108813619|ref|YP_649386.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|145597636|ref|YP_001161712.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides F]
 gi|170022761|ref|YP_001719266.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis
           YPIII]
 gi|186897005|ref|YP_001874117.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis
           PB1/+]
 gi|21956816|gb|AAM83742.1|AE013615_3 putative isomerase [Yersinia pestis KIM 10]
 gi|45438432|gb|AAS63979.1| putative isomerase [Yersinia pestis biovar Microtus str. 91001]
 gi|108777267|gb|ABG19786.1| hypothetical protein YPN_3459 [Yersinia pestis Nepal516]
 gi|108781630|gb|ABG15688.1| hypothetical protein YPA_3726 [Yersinia pestis Antiqua]
 gi|145209332|gb|ABP38739.1| hypothetical protein YPDSF_0320 [Yersinia pestis Pestoides F]
 gi|169749295|gb|ACA66813.1| KpsF/GutQ family protein [Yersinia pseudotuberculosis YPIII]
 gi|186700031|gb|ACC90660.1| KpsF/GutQ family protein [Yersinia pseudotuberculosis PB1/+]
          Length = 357

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 52  EREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 107

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI ++S  +S + 
Sbjct: 108 FFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICMSSNPESTMG 167

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 168 KAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 227

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++KGI T+GD+
Sbjct: 228 GRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRIKGIFTDGDL 287

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D  Q  +G+V
Sbjct: 288 RRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVADGDQ-LLGVV 346

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 347 HMHDMLRAGVV 357


>gi|197117989|ref|YP_002138416.1| arabinose-5-phosphate isomerase [Geobacter bemidjiensis Bem]
 gi|197087349|gb|ACH38620.1| arabinose-5-phosphate isomerase [Geobacter bemidjiensis Bem]
          Length = 322

 Score =  238 bits (607), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 138/323 (42%), Positives = 194/323 (60%), Gaps = 10/323 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI-KAIKGRVVITGIGKSGHIGSKL 82
           ++ A R I  E   L +LE+S+ G     F  AV+ I  +  GRVV+TG+GKSG IG K+
Sbjct: 3   IEEAKRVIRVEAEALLNLEASING----AFEQAVQMILNSETGRVVVTGMGKSGLIGQKI 58

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LI
Sbjct: 59  ASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASLI 118

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F   
Sbjct: 119 AMAGNPTSTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKAE 178

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG  L +   D+MHSG+++PLV     + +A+  ++ K  G   V  +  
Sbjct: 179 DFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDDG 238

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G+IT+GD+ R   K L+   L   ++M    K I  + L   A+Q + Q++I+ L V
Sbjct: 239 ALIGVITDGDLRRALGKGLDIINLPAAELMKAGAKRINREELAARALQQMEQYSITSLFV 298

Query: 320 VDD--CQKAIGIVHFLDLLRFGI 340
            DD   +  +GIVH  DLL+ GI
Sbjct: 299 FDDDKAKAPVGIVHLHDLLKAGI 321


>gi|332678524|gb|AEE87653.1| Arabinose 5-phosphate isomerase [Francisella cf. novicida Fx1]
          Length = 323

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 204/322 (63%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  KGRV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KGRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  +I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHLNI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENSTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNDHSILGIVTMHDLIKL 320


>gi|118497807|ref|YP_898857.1| phosphosugar isomerase [Francisella tularensis subsp. novicida
           U112]
 gi|194323779|ref|ZP_03057555.1| arabinose 5-phosphate isomerase [Francisella tularensis subsp.
           novicida FTE]
 gi|118423713|gb|ABK90103.1| phosphosugar isomerase [Francisella novicida U112]
 gi|194322143|gb|EDX19625.1| arabinose 5-phosphate isomerase [Francisella tularensis subsp.
           novicida FTE]
          Length = 323

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 203/322 (63%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  KGRV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KGRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +   I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHLDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNDHNILGIVTMHDLIKL 320


>gi|37527888|ref|NP_931233.1| D-arabinose 5-phosphate isomerase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787324|emb|CAE16408.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 322

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ LE  + G+    F    E +   +G+V++ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 17  ERDGLTELEQHINGD----FDRTCELMFNCEGKVIVMGMGKSGHIGCKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S E+ +++   +R  IPLI +T+   S + 
Sbjct: 73  FFVHPGEASHGDLGMITPKDIVLAISNSGESSEILSLIPALKRQKIPLICMTNNCNSSMG 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 133 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGTL 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+M +GD IP V     L +A+  ++ ++ G   + DE + + GI T+GD+
Sbjct: 193 GRKLLLLVSDLMSTGDDIPKVNRNATLREALLEITRQKLGMTVICDENRYIDGIFTDGDL 252

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DL  + + DVM      I    L   A+ L++ H+I+ L+V +D  K +G++
Sbjct: 253 RRVFDMGVDLYNVKISDVMTTGGIRIKPHALAVDALNLMQSHHITSLLVAED-NKLLGVL 311

Query: 331 HFLDLLRFGII 341
           H  DLL+ G++
Sbjct: 312 HMHDLLQAGVV 322


>gi|304396323|ref|ZP_07378204.1| KpsF/GutQ family protein [Pantoea sp. aB]
 gi|304355832|gb|EFM20198.1| KpsF/GutQ family protein [Pantoea sp. aB]
          Length = 327

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   CA+  I A +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 22  EREGLEQLDQYINDD--FARACAL--IYACQGKVVVMGMGKSGHIGKKMAATFASTGTPA 77

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++++D++I +S SG S E+ A++   +R  I LI IT    S + 
Sbjct: 78  FFVHPAEASHGDLGMVSKNDVVIAISNSGESSEILALIPVLKRQHISLICITGRPDSAMG 137

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA++LLE+R F+  DF + HPGG L
Sbjct: 138 RVADVHLCVHVPQEACPLGLAPTSSTTATLVMGDALAVSLLEARGFTAEDFALSHPGGAL 197

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MHSGD +P V     L DA+  ++ K  G   +VD   K++GI T+GD+
Sbjct: 198 GRKLLLHVADIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDGLMKIEGIFTDGDL 257

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D    ++ +VM      +  + L   A+ L++  NI+ ++V DD  + +G+V
Sbjct: 258 RRIFDMGIDFQRATIGEVMTPGGIRVRPNMLAVEALNLMQTKNITSILVADD-DRLLGVV 316

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 317 HMHDMLRAGVV 327


>gi|120600245|ref|YP_964819.1| KpsF/GutQ family protein [Shewanella sp. W3-18-1]
 gi|146291825|ref|YP_001182249.1| KpsF/GutQ family protein [Shewanella putrefaciens CN-32]
 gi|120560338|gb|ABM26265.1| KpsF/GutQ family protein [Shewanella sp. W3-18-1]
 gi|145563515|gb|ABP74450.1| KpsF/GutQ family protein [Shewanella putrefaciens CN-32]
          Length = 325

 Score =  238 bits (607), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 134/320 (41%), Positives = 202/320 (63%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGSKVIDIEKLALDNLYQYVD---SIEFVQACELILNCSGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R +IP+IA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRKAIPVIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  A I L +    E+CP GLAPT+S    L +GDA+AIALL+++ F+  DF
Sbjct: 126 TGKPDSTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAKGFTREDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +   DVMHSG+ +PLV     + +A+  +S+K  G  AV+DE  KL
Sbjct: 186 AMSHPGGALGRKLLLRVRDVMHSGNELPLVNHDICITEALYEISKKGLGMTAVIDEQHKL 245

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R    ++N  T  + +VM +N   I +  L   A+Q++   NI+ L+V++
Sbjct: 246 VGIFTDGDLRRVIDAEVNLRTTPIANVMTRNCITITDSALAAQALQVMDSKNINGLIVIN 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                IG ++ LDL++ G+I
Sbjct: 306 KDHHPIGALNMLDLVKAGVI 325


>gi|323140929|ref|ZP_08075842.1| arabinose 5-phosphate isomerase [Phascolarctobacterium sp. YIT
           12067]
 gi|322414667|gb|EFY05473.1| arabinose 5-phosphate isomerase [Phascolarctobacterium sp. YIT
           12067]
          Length = 324

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/296 (43%), Positives = 184/296 (62%), Gaps = 6/296 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV+ I   +GR VITG+GKSG IG K+A+T ASTGTPSF++H AE  HGDLGM+T 
Sbjct: 29  NFAAAVKLILDCQGRTVITGMGKSGLIGRKMAATFASTGTPSFYLHPAEGIHGDLGMVTE 88

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I LS SG + E+  IL   RR    +IA+  +  S +  +AD+VL +    E+CP 
Sbjct: 89  SDVVIALSNSGETGEVLNILPSLRRIGAKIIAMVGKPDSTLGKNADVVLNVGVSKEACPL 148

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    LA GDALA+ALL+  NF+ + F + HPGG LG  L +    +MH G+  
Sbjct: 149 GLAPTSSTTAALAYGDALALALLKKHNFTASQFAIFHPGGSLGRKLLLTVGSIMHKGEEN 208

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDV 288
           P V     + DA+ ++++K  G V+VVD    ++G++T+GDI R   K ++ L   V ++
Sbjct: 209 PTVLADTKVQDALFVITDKGLGAVSVVDADGVMQGVLTDGDIRRGLSKGVDFLQRPVCEL 268

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M K PK I ED L   A+ L+  +    I+VL V+D   K IG++H  DL+R G++
Sbjct: 269 MTKAPKTITEDKLAAQALHLMESNKPKPITVLPVIDKDNKVIGLLHMTDLVRQGVV 324


>gi|148265016|ref|YP_001231722.1| KpsF/GutQ family protein [Geobacter uraniireducens Rf4]
 gi|146398516|gb|ABQ27149.1| KpsF/GutQ family protein [Geobacter uraniireducens Rf4]
          Length = 321

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 191/322 (59%), Gaps = 9/322 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A + I  E   L SL  ++ GE    F  AV  I A +GRVV+TG+GKSG IG K+A
Sbjct: 3   LEEAKKVIRIEAEALLSLADAINGE----FEKAVRLILASRGRVVVTGMGKSGLIGQKIA 58

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    L+A
Sbjct: 59  STMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETEEVVRILPIIKRLGASLVA 118

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A   D+ L +  + E+CP GLAPT S    LA+GDAL++ALL  R F+  D
Sbjct: 119 MTGNPSSNLAKAGDVFLDISVKEEACPLGLAPTASTTATLAMGDALSVALLLERGFNAED 178

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   D+MH G++IPLV  G  + +A+ +++ K  G   V      
Sbjct: 179 FALFHPGGALGKKLILTVEDMMHGGEAIPLVSAGTLMREALFVITSKGLGITGVTGADGA 238

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+IT+GD+ R   K  D+  L   D+M   PK I    L   A+Q + Q +I+ L V 
Sbjct: 239 LLGVITDGDLRRALEKGMDIINLPASDLMSMKPKRINRSELAAKALQQMEQFSITSLFVF 298

Query: 321 --DDCQKAIGIVHFLDLLRFGI 340
             D   + +GI+H  DLL+ GI
Sbjct: 299 ENDSSFRPVGIIHLHDLLKAGI 320


>gi|330446809|ref|ZP_08310460.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491000|dbj|GAA04957.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 323

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 124/292 (42%), Positives = 193/292 (66%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F+ A + +   +G+V++ G+GKSGHIG KLA+TLASTGTP+FFVH  EASHGDLGMI  +
Sbjct: 33  FNTACQLVLDCQGKVIVMGMGKSGHIGRKLAATLASTGTPAFFVHPGEASHGDLGMIKPE 92

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG + E+ A+L   +R  IP+I++T +  S +A  A + L +  E E+CP  
Sbjct: 93  DVVIAISNSGEASEILALLPVIKRLGIPMISMTGKPNSSMAKMAIVNLQITVEKEACPLN 152

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    L +GDALAI+++E+R F+ +DF + HPGG LG  L +  +DVMHSG+ +P
Sbjct: 153 LAPTSSTTATLVMGDALAISVMEARGFTADDFALSHPGGALGRKLLMRIADVMHSGEMLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVM 289
           +++    + DA+  +S K  G  AVV+  Q+L GI T+GD+ R  + H D++  S+ DVM
Sbjct: 213 IIEETASIKDALLEISRKGLGMTAVVNHQQELSGIFTDGDLRRLLDKHIDIHATSIGDVM 272

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +NP+ I    L    ++++    I+ L+V ++ Q  +G ++  DLL+ G++
Sbjct: 273 SRNPQTISPQLLAAEGLKIMEDRKINGLLVTENNQ-LVGALNMHDLLKAGVM 323


>gi|269104094|ref|ZP_06156791.1| arabinose 5-phosphate isomerase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163992|gb|EEZ42488.1| arabinose 5-phosphate isomerase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 322

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 138/322 (42%), Positives = 201/322 (62%), Gaps = 12/322 (3%)

Query: 26  CA--LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           CA  LR I  E   L+++   +  +    F  A E I    G+V++ G+GKSGHIG+K+A
Sbjct: 7   CANGLRVIETEIHALNNIRQYINQD----FANACELILNCSGKVIVMGMGKSGHIGNKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI ++D++I +S SG + E+ A+L   +R  IPLIA
Sbjct: 63  ATLASTGTSAFFVHPGEASHGDLGMIKKNDVVIAISNSGEASEILALLPVIKRLGIPLIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S +A  A   L +  + E+CP  LAPT+S    L +GDALAIA++E+R F+ ND
Sbjct: 123 MTGKPESSMAKLAQYHLQITVDKEACPLNLAPTSSTTATLVMGDALAIAIMEARGFTAND 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SDVMHSGD +P+V     + DA+  +S K  G  A+VD  Q+
Sbjct: 183 FALSHPGGALGRKLLMRISDVMHSGDDLPIVTEHATIKDALLEISRKGLGMTAIVDNEQQ 242

Query: 263 LKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R  + H D++  ++  VM +NPK I    L    ++L+    I+ L+V 
Sbjct: 243 LIGIFTDGDLRRLLDDHIDIHNTTIGTVMSRNPKTISPQLLAAEGLKLMEDKKINGLLVT 302

Query: 321 DD-CQKAIGIVHFLDLLRFGII 341
           +  C   +G ++  DLL+ G+I
Sbjct: 303 EQSC--LVGALNMHDLLKAGVI 322


>gi|302392914|ref|YP_003828734.1| KpsF/GutQ family protein [Acetohalobium arabaticum DSM 5501]
 gi|302204991|gb|ADL13669.1| KpsF/GutQ family protein [Acetohalobium arabaticum DSM 5501]
          Length = 325

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 137/317 (43%), Positives = 187/317 (58%), Gaps = 7/317 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R +  EK  + +L  S+ G     F   VE I    GRVV+TG+GKSG I  KLA+T 
Sbjct: 12  AKRVLDIEKEAIENLSDSING----TFVELVEVILNCSGRVVMTGMGKSGLIAKKLAATF 67

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTPSFF+H  EA HGDLGM+T  D++I LS SG + E+  IL   +R    +IA+T 
Sbjct: 68  SSTGTPSFFLHPGEAVHGDLGMVTAKDIVIALSNSGETTEVIQILPVIKRIGARIIALTG 127

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A +AD  L    E E+CP  LAPT S    LA+GDALAIALLESR F   DF +
Sbjct: 128 NIDSTLAENADYFLDTSVEQEACPLDLAPTASTTATLALGDALAIALLESRGFEPEDFAL 187

Query: 207 LHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +   DVMH  +  P+V    PL   +  ++  + G   +V+E  KL G
Sbjct: 188 YHPGGSLGKRLLLKVEDVMHVRERNPIVTQDQPLKKTLFTMTSTQMGAANIVNEAGKLVG 247

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +IT+GD+ R   +  DL  L  + VM  +P  I  D L   A+++++   I+ L V++D 
Sbjct: 248 VITDGDVRRKLEESPDLLQLPAKQVMTADPVTITADKLAVEAVKIMQDKEINDLPVINDE 307

Query: 324 QKAIGIVHFLDLLRFGI 340
           Q+ IG+V+F DLL+ G+
Sbjct: 308 QEPIGMVNFQDLLKAGV 324


>gi|119776215|ref|YP_928955.1| arabinose-5-phosphate isomerase [Shewanella amazonensis SB2B]
 gi|119768715|gb|ABM01286.1| Arabinose-5-phosphate isomerase [Shewanella amazonensis SB2B]
          Length = 325

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/320 (40%), Positives = 206/320 (64%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S  F  A E I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGSKVIDIEKAALDNLYQFVD---SDAFADACELILRCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  IP+I++
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSDNDIVLAISNSGESSEILTLMPVIKRRGIPIISM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A H+ + L +    E+CP GLAPT+S    L +GDALA+ALL+++ F+++DF
Sbjct: 126 TGKPESTMAKHSLLHLCIKVPEEACPLGLAPTSSTTATLVMGDALAVALLQAKGFTKDDF 185

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SDVMH GD +PLV+    + DA+  +S+K  G  A+V+    L
Sbjct: 186 AMSHPGGALGRKLLLHVSDVMHKGDELPLVQDDICITDALYEISKKGLGMTAIVNASGAL 245

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R  +   +L   S+ DVM +N   I E  L   A++L+ + NI+ L+V+D
Sbjct: 246 EGIFTDGDLRRVIDAQINLRQTSIADVMTRNCITIGEHILAAEALKLMDEKNINGLIVID 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             ++ IG ++ LD+++ G+I
Sbjct: 306 AERRPIGALNMLDMVKAGVI 325


>gi|56552426|ref|YP_163265.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761534|ref|ZP_04759621.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753899|ref|YP_003226792.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|56544000|gb|AAV90154.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373842|gb|EER63375.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258553262|gb|ACV76208.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 336

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 118/299 (39%), Positives = 189/299 (63%), Gaps = 5/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   +   F  AV  +   +GR++++GIGKSGH+G K+A+TLASTG+ +FF+H AEA+HG
Sbjct: 40  LAASIGVDFAKAVSMLLETRGRIIVSGIGKSGHVGRKIAATLASTGSSAFFIHPAEAAHG 99

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D++I +S+SG + EL  ++ YA+   +P+I ITS+   V+   A + L LP+
Sbjct: 100 DLGMMMNGDILIAISFSGRTRELLPMISYAQTLQVPVIVITSQKGDVLPKEATLSLRLPE 159

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+CP  +APTTS  + +A+GDALA++++  R FS + F +LHPGG++G      S +M
Sbjct: 160 LKEACPANIAPTTSTTLTMALGDALAVSMMRHRGFSRDAFKLLHPGGQIGFRLQSISRLM 219

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTL 283
           H G ++PLV    P+ D +  +S K FG   VV++  +L G+IT+GD+ R  H D L   
Sbjct: 220 HEGAALPLVHCKEPMRDVLVTMSRKSFGSAGVVNDEGELMGVITDGDLRR--HADHLMES 277

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRFGI 340
           + EDVM  +P  +  D +   A+ L+ +  I+ L ++  +  ++ +G++H  DL R G+
Sbjct: 278 AAEDVMTSDPVTMRADDMAEDALILMTEKRITSLFILGKNGAKQPVGLLHIHDLTRMGL 336


>gi|16762077|ref|NP_457694.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143566|ref|NP_806908.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213053150|ref|ZP_03346028.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426642|ref|ZP_03359392.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586480|ref|ZP_03368306.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213648392|ref|ZP_03378445.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289825825|ref|ZP_06544993.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|37079514|sp|Q8Z3G6|KDSD_SALTI RecName: Full=Arabinose 5-phosphate isomerase
 gi|25303286|pir||AB0905 conserved hypothetical protein STY3494 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504380|emb|CAD07832.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139201|gb|AAO70768.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 328

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|168238017|ref|ZP_02663075.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194736831|ref|YP_002116265.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194712333|gb|ACF91554.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197289074|gb|EDY28443.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 328

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYINQD----FTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|94968087|ref|YP_590135.1| KpsF/GutQ family protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550137|gb|ABF40061.1| KpsF/GutQ family protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 338

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 133/312 (42%), Positives = 182/312 (58%), Gaps = 11/312 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   L  L   + G ++  F  AV+ +    GRVV++G+GKSG IG K+A+T +STG P+
Sbjct: 22  EAEALRELADRIAGPMAADFQRAVDLLACCGGRVVVSGMGKSGLIGRKMAATFSSTGAPA 81

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN----- 148
            F+H AEA HGDLGMI R D++I LS SG ++E+  +L   +R   P+I +T +N     
Sbjct: 82  LFLHPAEAMHGDLGMIARGDVVIALSASGETEEILNLLPTIKRLGAPVITMTCDNLYANG 141

Query: 149 --KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A  AD+ L      E+C  GLAPT S    LA+GDALA+AL E R F E DF  
Sbjct: 142 AKRSTLAQAADVALDCSIAQEACTLGLAPTASTTTMLALGDALAMALAEKRGFKEEDFAN 201

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           LHPGGKLG      S +MH+GD+IP V     + D I  +S K+ G   VV +G+KL GI
Sbjct: 202 LHPGGKLGKRLTKVSALMHAGDAIPRVTAETKMSDVIYEMSRKKLGVTTVV-KGEKLLGI 260

Query: 267 ITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I++GD+ R      KD+  L+  + M  +PK I  +   T A+ L+ Q  I+ L VVD  
Sbjct: 261 ISDGDLRRLLEHRGKDVMDLTAGECMTSSPKTIHPEAYATAALDLMEQRKITSLAVVDSN 320

Query: 324 QKAIGIVHFLDL 335
            +  GIVH  DL
Sbjct: 321 GELKGIVHLHDL 332


>gi|261868047|ref|YP_003255969.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413379|gb|ACX82750.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 311

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 191/311 (61%), Gaps = 13/311 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++  E+  L  L+  L G     F   V  I   KGR+VI GIGKSG +G K+ +T 
Sbjct: 7   AQETLGVEENALGQLKQRLDG----TFADVVNLILNCKGRLVIGGIGKSGLVGKKMVATF 62

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H  EA HGDLGM+   DL++++S+SG +D++  ++   + F   +IA+TS
Sbjct: 63  ASTGTPSFFLHPTEAFHGDLGMLKPIDLVMLISYSGETDDVNKLIPSLKNFGNKIIALTS 122

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A HAD VL +  E E CP+ LAPTTS I+ +A+GDALA+ L+ +R+F   DF  
Sbjct: 123 NKNSTLARHADYVLDITVEREVCPNNLAPTTSVIVTMALGDALAVCLVRARDFQPEDFAK 182

Query: 207 LHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG   +C   D M +   +P+  +     D +TI++E R G VA+V E Q+L+G
Sbjct: 183 FHPGGSLGRCLLCRVKDQMQT--HLPIAALTTTFTDCLTIMNEGRMG-VALVMEQQQLRG 239

Query: 266 IITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           IIT+GDI R    N  + LN  + +++M  +PK I +DT ++ A   ++ H I  L+VVD
Sbjct: 240 IITDGDIRRALTANGAETLNK-TAQELMTSHPKTIHQDTYISEAENYMKAHKIHSLVVVD 298

Query: 322 DCQKAIGIVHF 332
           D Q  +G+V F
Sbjct: 299 DAQHVVGLVEF 309


>gi|308189075|ref|YP_003933206.1| isomerase [Pantoea vagans C9-1]
 gi|308059585|gb|ADO11757.1| putative isomerase [Pantoea vagans C9-1]
          Length = 327

 Score =  238 bits (606), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   CA+  I A +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 22  EREGLEQLDQYINDD--FARACAL--IYACQGKVVVMGMGKSGHIGKKMAATFASTGTPA 77

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM++++D++I +S SG S+E+ A++   +R  I LI +T    S + 
Sbjct: 78  FFVHPAEASHGDLGMVSKNDVVIAISNSGESNEILALIPVLKRQHIALICMTGRPDSAMG 137

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPTTS    L +GDALA++LLE+R F+  DF + HPGG L
Sbjct: 138 RVADVHLCVHVPQEACPLGLAPTTSTTATLVMGDALAVSLLEARGFTAEDFALSHPGGAL 197

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+MHSGD +P V     L DA+  ++ K  G   +VD   K++GI T+GD+
Sbjct: 198 GRKLLLHVADIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDGLMKIEGIFTDGDL 257

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D    ++ +VM      +  + L   A+ L++  NI+ ++V DD    +G+V
Sbjct: 258 RRIFDMGIDFQRATIGEVMTPGGIRVRPNMLAVEALNLMQTKNITSILVADD-DHLLGVV 316

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 317 HMHDMLRAGVV 327


>gi|319786676|ref|YP_004146151.1| KpsF/GutQ family protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465188|gb|ADV26920.1| KpsF/GutQ family protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 331

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/292 (43%), Positives = 179/292 (61%), Gaps = 3/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A   I A  GR+V TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  
Sbjct: 40  FASACSLILASPGRLVCTGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITDT 99

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ LS+SG SDE+  +L   RR    +IA+T    S +A  ADI L +    E+CP  
Sbjct: 100 DIVLALSYSGESDEVLMLLPALRRQGNKVIAMTGREHSTLAREADIHLDVNVPAEACPLH 159

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    LA+GDALA+ALLE+R F+ +DF   HP G LG  L +  +DVMH G+ +P
Sbjct: 160 LAPTSSTTASLAMGDALAVALLEARGFTADDFARSHPAGSLGRRLLLHVTDVMHGGEELP 219

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V     + +A+  +S KR G  A+      L GI T+GD+ R   +  D+    + +VM
Sbjct: 220 CVGEEASVAEALVEMSRKRLGMTAIAAADGTLAGIFTDGDLRRALDRGIDVRQAGIAEVM 279

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +NP+ I    + T A  L+ QH I+ L+V+D  ++ +G ++  DLLR  ++
Sbjct: 280 TRNPRTIDATQMATEAAHLMEQHRINGLVVIDGERRPVGALNVHDLLRARVV 331


>gi|22138774|emb|CAD43107.1| hypothetical protein [Pseudomonas stutzeri]
          Length = 324

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/300 (43%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   +   F  A E I A KGRVV+ G+GKSGHIG K+A+TLASTGT +FFVH AEASHG
Sbjct: 25  LNARIDASFVQACELILACKGRVVVVGMGKSGHIGRKIAATLASTGTAAFFVHPAEASHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+GMIT DD+++ LS SG++ E+  +L   +R  I LI++T    SV+A  A + L    
Sbjct: 85  DMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGITLISMTGSPSSVLAKAAAVNLDASV 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT+S    L +GDALAIALLE+R F+  DF   HPGG LG  L +    V
Sbjct: 145 AIEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVEHV 204

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           MH+G+ +P V  G  L DA+  +++K  G   +V+   +L GI T+GD+ R   K  D+ 
Sbjct: 205 MHTGERLPRVPRGTSLRDALLEMTQKGLGMTVIVETDGRLAGIFTDGDLRRALDKGVDVR 264

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +++VM  + K    + L   A++++  H IS L+V+D+ +  IG ++  DLLR G++
Sbjct: 265 QTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISSLVVIDEQELPIGALNMHDLLRAGVM 324


>gi|146281422|ref|YP_001171575.1| sugar isomerase [Pseudomonas stutzeri A1501]
 gi|145569627|gb|ABP78733.1| sugar isomerase [Pseudomonas stutzeri A1501]
          Length = 318

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/300 (43%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   +   F  A E I A KGRVV+ G+GKSGHIG K+A+TLASTGT +FFVH AEASHG
Sbjct: 19  LNARIDASFVQACELILACKGRVVVVGMGKSGHIGRKIAATLASTGTAAFFVHPAEASHG 78

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+GMIT DD+++ LS SG++ E+  +L   +R  I LI++T    SV+A  A + L    
Sbjct: 79  DMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGITLISMTGSPSSVLAKAAAVNLDASV 138

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT+S    L +GDALAIALLE+R F+  DF   HPGG LG  L +    V
Sbjct: 139 AIEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVEHV 198

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           MH+G+ +P V  G  L DA+  +++K  G   +V+   +L GI T+GD+ R   K  D+ 
Sbjct: 199 MHTGERLPRVPRGTSLRDALLEMTQKGLGMTVIVETDGRLAGIFTDGDLRRALDKGVDVR 258

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +++VM  + K    + L   A++++  H IS L+V+D+ +  IG ++  DLLR G++
Sbjct: 259 QTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISSLVVIDEQELPIGALNMHDLLRAGVM 318


>gi|292486809|ref|YP_003529679.1| putative isomerase [Erwinia amylovora CFBP1430]
 gi|292900793|ref|YP_003540162.1| arabinose 5-phosphate isomerase [Erwinia amylovora ATCC 49946]
 gi|291200641|emb|CBJ47773.1| arabinose 5-phosphate isomerase [Erwinia amylovora ATCC 49946]
 gi|291552226|emb|CBA19263.1| putative isomerase [Erwinia amylovora CFBP1430]
 gi|312170877|emb|CBX79136.1| putative isomerase [Erwinia amylovora ATCC BAA-2158]
          Length = 329

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   C  + I   +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 24  EREGLEQLDRYINDD--FTRTC--DLIYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPA 79

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI ITS  +S + 
Sbjct: 80  FFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICITSRPESAMG 139

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 140 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 199

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH G+ +P V     L +A+  +++K  G   + D   ++ GI T+GD+
Sbjct: 200 GRKLLLRVDDIMHCGNDMPHVSRDASLRNALLEMTQKNMGMTVICDAAMQIGGIFTDGDL 259

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV ++  + +G++
Sbjct: 260 RRIFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAEN-NRLLGVI 318

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 319 HMHDMLRAGVV 329


>gi|254787684|ref|YP_003075113.1| arabinose 5-phosphate isomerase [Teredinibacter turnerae T7901]
 gi|237685086|gb|ACR12350.1| arabinose 5-phosphate isomerase [Teredinibacter turnerae T7901]
          Length = 322

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 209/321 (65%), Gaps = 8/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   + +LE  + GE    F  A EKI +  GRVV++G+GKSGHIG K+A
Sbjct: 7   IQSAQRTIALEIAAVQALEERINGE----FVAACEKILSCSGRVVVSGMGKSGHIGKKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH  EASHGDLGMITRDD+ + +S SG+S E+ AIL + +R  IP++A
Sbjct: 63  ATLASTGTPAFFVHPGEASHGDLGMITRDDVFLCISNSGNSPEMVAILPWIKRMGIPVVA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T ++ S +A  AD++L +    E+CP  LAPT+S  + L +GDALA+ALLE+R F+  D
Sbjct: 123 MTGKSNSPLAEAADVILDIAVATEACPLDLAPTSSTTVTLVLGDALALALLEARGFTAED 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +  +DVMH G+++P+V    P+++A+  +S K FG   VVD   +
Sbjct: 183 FAYSHPGGTLGRRLLLHVADVMHDGETVPIVTTTTPVLEALGEMSRKGFGITTVVDATGE 242

Query: 263 LKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +D+     S+E VM +  + I    L   A  L+  H I+ L+V 
Sbjct: 243 LVGVFTDGDLRRCLDRDIEVKNASIEQVMSRGGRTITPQALAAEAFNLMETHKITALVVT 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+  K +GI+H  D+L+ G++
Sbjct: 303 DN-NKPVGILHMHDMLQAGLV 322


>gi|167552035|ref|ZP_02345788.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205323167|gb|EDZ11006.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 328

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|83720870|ref|YP_441048.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|167579780|ref|ZP_02372654.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis TXDOH]
 gi|167617855|ref|ZP_02386486.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis Bt4]
 gi|257140299|ref|ZP_05588561.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|83654695|gb|ABC38758.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia
           thailandensis E264]
          Length = 327

 Score =  237 bits (605), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 137/306 (44%), Positives = 192/306 (62%), Gaps = 3/306 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +S   +L  +L  +F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH 
Sbjct: 22  ASAVRALADQLDGEFVAAVGLLLECRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHP 81

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A  +D+
Sbjct: 82  AEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLATLSDV 141

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLF 217
            L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L 
Sbjct: 142 HLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGALGRRLL 201

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               DVM +GD +P V +G  L DA+  ++ KR G  AVVD+  ++ GI T+GD+ R   
Sbjct: 202 TYVRDVMRTGDEVPAVPLGATLSDALFQITAKRMGMTAVVDDAGRVAGIFTDGDLRRVLE 261

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D   L + DVM +NP+ I  D L   A++L+ +H I+ ++VVD+    IG ++  DL
Sbjct: 262 RDGDFRRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQMLVVDEHGALIGALNMHDL 321

Query: 336 LRFGII 341
               +I
Sbjct: 322 FSKKVI 327


>gi|16766610|ref|NP_462225.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56415244|ref|YP_152319.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|167994508|ref|ZP_02575599.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243151|ref|ZP_02668083.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168262672|ref|ZP_02684645.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168819615|ref|ZP_02831615.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446312|ref|YP_002042573.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448372|ref|YP_002047344.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197264842|ref|ZP_03164916.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197364174|ref|YP_002143811.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244781|ref|YP_002217286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204931212|ref|ZP_03222006.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205354216|ref|YP_002228017.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858563|ref|YP_002245214.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238910109|ref|ZP_04653946.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|37079531|sp|Q8ZLS1|KDSD_SALTY RecName: Full=Arabinose 5-phosphate isomerase
 gi|16421872|gb|AAL22184.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56129501|gb|AAV79007.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194404975|gb|ACF65197.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406676|gb|ACF66895.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197095651|emb|CAR61219.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197243097|gb|EDY25717.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197939297|gb|ACH76630.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204319979|gb|EDZ05185.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205273997|emb|CAR39003.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205327614|gb|EDZ14378.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337836|gb|EDZ24600.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343485|gb|EDZ30249.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348384|gb|EDZ35015.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206710366|emb|CAR34724.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261248480|emb|CBG26317.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995514|gb|ACY90399.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159864|emb|CBW19383.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914342|dbj|BAJ38316.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087760|emb|CBY97524.1| putative isomerase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225261|gb|EFX50320.1| Arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|332990173|gb|AEF09156.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 328

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|189345877|ref|YP_001942406.1| KpsF/GutQ family protein [Chlorobium limicola DSM 245]
 gi|189340024|gb|ACD89427.1| KpsF/GutQ family protein [Chlorobium limicola DSM 245]
          Length = 326

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 127/296 (42%), Positives = 187/296 (63%), Gaps = 3/296 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AV  + A  G+++I+G+GKSG I  K+A+T+ASTGT + F+H A+A+HGDLG
Sbjct: 31  RLDDTFASAVTAMHACSGKIIISGMGKSGIIAQKIAATMASTGTTAMFLHPADAAHGDLG 90

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +++  D++I LS SG+++EL  IL   RR  + +IA+T   +S +A +ADIVL    + E
Sbjct: 91  IVSEGDVVICLSKSGTTEELNFILPALRRIGVAIIALTGNPRSYLARNADIVLDTGIDQE 150

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALAI L++++ F+  DF + HP G LG  L + ASD+M S
Sbjct: 151 ACPFDLAPTSSTTAMLAMGDALAITLMQAKQFTPRDFALTHPKGALGRRLTMKASDIMAS 210

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLS 284
           GD++P+V     L + I  ++ KR+G  A+VD   KL GI T+GD+ R   K  N   LS
Sbjct: 211 GDALPIVDDQAVLGELILEMTSKRYGVSAIVDRKGKLSGIFTDGDLRRIVQKGGNFLQLS 270

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              VM +NPK +  DTL    + +L    I+ LMV D+  + +GI+H  DL+  G+
Sbjct: 271 ARSVMTENPKSVPPDTLAKECLDILETFRITQLMVCDNDNRPVGIIHIHDLITLGL 326


>gi|307129068|ref|YP_003881084.1| D-Arabinose 5-phosphate isomerase [Dickeya dadantii 3937]
 gi|306526597|gb|ADM96527.1| D-Arabinose 5-phosphate isomerase [Dickeya dadantii 3937]
          Length = 328

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R +++ E+  L+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QTAGRQVLSIERDSLAQLDQYIDD----NFSRACEKMFYCHGKVVVMGMGKSGHIGCKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI 
Sbjct: 69  ATFASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 MTGNPESTMAKAADIHLCVHVSQEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V     L DA+  ++ K  G   +     +
Sbjct: 189 FALSHPGGALGRKLLLRINDIMHTGDEIPRVGRDASLRDALLEITRKNLGMTVICGPDDR 248

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F  + DLN+  + DVM +    +   TL   A+ L++  +I+ L+V 
Sbjct: 249 IEGIFTDGDLRRVFDMNIDLNSAGIADVMTRGGIRVTPQTLAVDALNLMQSRHITSLLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +D  +  GIVH  D+LR G++
Sbjct: 309 ED-DRLRGIVHMHDMLRAGVV 328


>gi|89052564|ref|YP_508015.1| KpsF/GutQ family protein [Jannaschia sp. CCS1]
 gi|88862113|gb|ABD52990.1| KpsF/GutQ family protein [Jannaschia sp. CCS1]
          Length = 321

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/307 (44%), Positives = 190/307 (61%), Gaps = 6/307 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R +++L  +L  +    F  A + I   KGRV++ GIGKSGHI  K+++T ASTGTPS
Sbjct: 20  EARAVATLADALPQD----FEPAAQAILGTKGRVILCGIGKSGHICRKISATFASTGTPS 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            FVHAAEASHGDLGM+   DL+I +S SG + EL  I+ +  RF+IPLI I+ +  S + 
Sbjct: 76  AFVHAAEASHGDLGMMMPGDLVIAISNSGETAELNDIIAHVTRFAIPLIGISKKPDSTLM 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD  LTLP   E+C  G+APTTS  + LA+GDALA+A++E R F    F   HPGGKL
Sbjct: 136 RAADFRLTLPAAAEACSLGMAPTTSTTLALALGDALAVAVMEQRGFLPEQFRTFHPGGKL 195

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      + +MH  D++PLV    P+ + + ++SEK FG   VV EG +L G+I++GD+ 
Sbjct: 196 GAQLSTVAQLMHGPDALPLVHASTPMAETLVVMSEKSFGIAGVV-EGGRLTGVISDGDLR 254

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           RN    L   +  +V    P+ I  D L   AM ++  + I+ L VVDD  + +G++H  
Sbjct: 255 RNI-AHLTDRTATEVATHQPRTIAPDVLAAEAMGMMAANKITALFVVDDTARPLGLIHLH 313

Query: 334 DLLRFGI 340
           DLLR G+
Sbjct: 314 DLLRAGL 320


>gi|290476797|ref|YP_003469708.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           bovienii SS-2004]
 gi|289176141|emb|CBJ82946.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           bovienii SS-2004]
          Length = 328

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E  GL+ LE  +  +    F  A E +   +G++++ G+GKSGHIG K+A+
Sbjct: 14  QSGKKVLQVELDGLAELEQYINED----FSRACELMFGCEGKIIVMGMGKSGHIGRKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTPSFFVHPGEASHGDLGMVTSKDIVLTISNSGESNEIVALIPVLKRQKVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPNSSMGKAADIHLCIKTPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SD+M  GD IP V     L +A+  ++ K+ G   + D+  ++
Sbjct: 190 ALSHPGGTLGRKLLLLTSDLMTIGDDIPRVPYTATLREALVEITRKKLGMTVICDDDMQI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN  ++ DVM      I   TL   A+ L++  +I+ L+V D
Sbjct: 250 KGIFTDGDLRRVFDMGIDLNHANISDVMTIGGVRIKPHTLAVDALNLMQSRHITSLLVTD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G++H  DLL+ G++
Sbjct: 310 G-DKLLGVLHMHDLLQAGVV 328


>gi|238896704|ref|YP_002921449.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238549031|dbj|BAH65382.1| putative isomerase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 328

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 136/321 (42%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R ++  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ +++   +R  + LI 
Sbjct: 69  ATFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILSLIPVLKRQQVKLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  D
Sbjct: 129 ITSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V +   L DA+  ++ K  G  A+ D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMN 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V 
Sbjct: 249 IIGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D     +G+VH  DLLR G++
Sbjct: 309 DG-DHLLGVVHMHDLLRAGVV 328


>gi|94501782|ref|ZP_01308295.1| KpsF/GutQ [Oceanobacter sp. RED65]
 gi|94426090|gb|EAT11085.1| KpsF/GutQ [Oceanobacter sp. RED65]
          Length = 322

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 198/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + ++   R+I  E+  +  L  +L  E     + A + +   +GR+V+TG+GKSGHI
Sbjct: 1   MSFNYIESIQRTIADERDAVDQLLKNLNHE---ALNTACDLLLNCQGRIVVTGMGKSGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTG+P+FFVH  EA+HGD+GMIT  D++I LS SG S E+  ++   +R +
Sbjct: 58  GNKIAATLASTGSPAFFVHPGEAAHGDMGMITEQDVVIALSNSGESSEVTTLIPLLKRLN 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLI++T  + S +A  AD  + +  E E+CP  LAPT+S  + L +GDALAIALLE+R 
Sbjct: 118 VPLISMTGNDTSTLATGADSHINVGVEKEACPLDLAPTSSTTVALVMGDALAIALLEARG 177

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+   F   HPGG LG  L +    +MH G  IP VK    + DA+  +++K  G   V+
Sbjct: 178 FTAEQFAFSHPGGSLGRKLLLKVKTIMHCGSQIPQVKPDTLVKDALIEMTQKGLGMTTVI 237

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           DE  +L GI T+GD+ R   KD++  T  V+ VM      I  + L   A+Q++ +  I+
Sbjct: 238 DEHGQLSGIFTDGDLRRTLDKDIDFHTTPVQAVMTTGVTTIDPERLAAEALQVMEEKKIN 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+  ++  K  G+++  DLLR G+I
Sbjct: 298 ALVATENG-KVAGVINMHDLLRAGVI 322


>gi|78776414|ref|YP_392729.1| KpsF/GutQ [Sulfurimonas denitrificans DSM 1251]
 gi|78496954|gb|ABB43494.1| KpsF/GutQ [Sulfurimonas denitrificans DSM 1251]
          Length = 320

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 125/292 (42%), Positives = 192/292 (65%), Gaps = 5/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AVE I   KG++++TG+GKSG IG+K+A+T ASTGTPSFF+H  EA HGDLGMI+  
Sbjct: 29  FDKAVEIILTCKGKLIVTGVGKSGLIGAKMAATFASTGTPSFFLHPTEALHGDLGMISHS 88

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S+SG S+EL +IL + +RF+ PLI +T +  S +  ++D+V+ +    E+CP G
Sbjct: 89  DVVIAISYSGESEELSSILPHIKRFNTPLIGMTRDKNSTLGKYSDLVIDVIVNKEACPLG 148

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           +APT+S  + LA+GDALA+ L+ ++NF ++DF   HPGG LG  LFV   D+M   + +P
Sbjct: 149 IAPTSSTTLTLALGDALAVCLMRAKNFKKSDFASFHPGGALGKQLFVKVKDLMRVKE-LP 207

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVM 289
           +VK    + DAI  +SE R G V V DE  +L  ++++GDI R    +  +L  SV    
Sbjct: 208 IVKADTKVKDAIFKISEGRLGTVLVTDEQNRLLALMSDGDIRRALMSEDFSLEESVLKYA 267

Query: 290 IKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            KNPK I ++ +L + A+ ++ +  I +L+V D  ++ +G++H   L+  GI
Sbjct: 268 TKNPKTIEDENILASEALVIIEEMKIQLLVVTDKHRRVLGVLHIHTLIEKGI 319


>gi|168463459|ref|ZP_02697376.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195633752|gb|EDX52166.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 328

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 189/311 (60%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYIDQ----NFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|170728560|ref|YP_001762586.1| KpsF/GutQ family protein [Shewanella woodyi ATCC 51908]
 gi|169813907|gb|ACA88491.1| KpsF/GutQ family protein [Shewanella woodyi ATCC 51908]
          Length = 325

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 130/316 (41%), Positives = 203/316 (64%), Gaps = 5/316 (1%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++I  +R  ++L++  Q   S +F  A + I    G+V++ G+GKSGHIG+K+++TLAS
Sbjct: 12  RTVIDIER--NALDNLYQYVDSEEFTQACKLILNCTGKVIVMGMGKSGHIGNKISATLAS 69

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGDLG+++ +D+I+ +S SG + E+  ++   +R  +P+IA T   
Sbjct: 70  TGTPAFFVHPGEASHGDLGVLSENDIILAISNSGEASEILTLMPVIKRMGLPVIACTGNP 129

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  + + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+++DF + H
Sbjct: 130 DSNMAKLSVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTKDDFALSH 189

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +  SDVMH G  +P V     + +A+  +S+K  G  AVVDE  KL GI 
Sbjct: 190 PGGSLGRKLLLKVSDVMHKGKDLPSVNHDICITEALYEISKKSLGMTAVVDEANKLVGIF 249

Query: 268 TEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R    ++N  T S+ DVM K    +  D L   A++++   +I+ L+V+DD Q 
Sbjct: 250 TDGDLRRVIDSEVNLRTTSISDVMSKGCVTVSADILAAAALKVMEDKDINGLIVIDDQQH 309

Query: 326 AIGIVHFLDLLRFGII 341
            IG ++ LD+++ G+I
Sbjct: 310 PIGALNMLDMVKAGVI 325


>gi|62181823|ref|YP_218240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129456|gb|AAX67159.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322716312|gb|EFZ07883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323131675|gb|ADX19105.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326629338|gb|EGE35681.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 336

 Score =  237 bits (604), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 31  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 86

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 87  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 146

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 147 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 206

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 207 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 266

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 267 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 325

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 326 HMHDLLRAGVV 336


>gi|269960370|ref|ZP_06174744.1| Arabinose 5-phosphate isomerase [Vibrio harveyi 1DA3]
 gi|269834981|gb|EEZ89066.1| Arabinose 5-phosphate isomerase [Vibrio harveyi 1DA3]
          Length = 323

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 191/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACELILSNNGKVVVMGMGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R +I +I++T + +S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLNIKIISMTGKPESNMAKLSDLHLQITVPKEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ DV
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGDV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M KNP     + L    + L++  NI+ L++ D+  K +G ++  DLL+ G++
Sbjct: 272 MTKNPTTAHPEMLAVEGLNLMQDKNINALILCDN-NKIVGALNMHDLLKAGVM 323


>gi|221134717|ref|ZP_03561020.1| arabinose 5-phosphate isomerase [Glaciecola sp. HTCC2999]
          Length = 322

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 205/326 (62%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  S +  A R I  E  G+++L   L       F  A E++   KG+VV++G+GKSGHI
Sbjct: 1   MSTSFISSAKRVIDTEMAGIATLHDCLND----NFVEACERLLNCKGKVVVSGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTP+FF+H  EA+HGDLGM++ DD++I +S SG +DEL  +L   +R  
Sbjct: 57  GNKIAATLASTGTPAFFMHPGEANHGDLGMLSPDDVVIGISNSGETDELLGLLPVLKRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I LIAIT   +S +A HADIV+T+    E+C  GLAPTTS  + L +GDALA+ALL+++ 
Sbjct: 117 ITLIAITQNMQSTLAKHADIVVTIKVPAEACSLGLAPTTSTTVTLVLGDALAVALLDAKG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG  L +  +D+M +G+ IP V     +  A+  ++ K  G   V+
Sbjct: 177 FTSEDFALSHPGGSLGRKLLLTCADIMRTGNDIPSVPANTQVPVALYEITSKGLGMTGVI 236

Query: 258 DEGQKLKGIITEGDIFRNF-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E   L GI T+GD+ R   HK D++ L+ EDVM  N   +  D L   A+ L+++ +I+
Sbjct: 237 HEDGTLIGIFTDGDLRRVLDHKLDIHALTAEDVMTPNCLTVSADMLAVDALNLMQEQHIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VV++  + IG  +   LL+ G++
Sbjct: 297 ALLVVNNTHQIIGAFNMHMLLQAGVV 322


>gi|224585112|ref|YP_002638911.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469640|gb|ACN47470.1| hypothetical protein SPC_3385 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|326625065|gb|EGE31410.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 335

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 30  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 85

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 86  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 145

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 146 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 205

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 206 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 265

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 266 RRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 324

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 325 HMHDLLRAGVV 335


>gi|238785097|ref|ZP_04629092.1| Arabinose 5-phosphate isomerase [Yersinia bercovieri ATCC 43970]
 gi|238713989|gb|EEQ06006.1| Arabinose 5-phosphate isomerase [Yersinia bercovieri ATCC 43970]
          Length = 319

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 14  EREGLAQLDQYINDD----FSSACEAIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +++  +S + 
Sbjct: 70  FFVHPAEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIKLICMSNNPESTMG 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 130 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 190 GRKLLLRISDIMHTGAEIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 249

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN+  + DVM      +    L   A+ L+   +I+ ++V D  ++ +G+V
Sbjct: 250 RRVFDMGVDLNSAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVADG-EQLLGVV 308

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 309 HMHDMLRAGVV 319


>gi|325103762|ref|YP_004273416.1| KpsF/GutQ family protein [Pedobacter saltans DSM 12145]
 gi|324972610|gb|ADY51594.1| KpsF/GutQ family protein [Pedobacter saltans DSM 12145]
          Length = 322

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  A  +++ E R +  L   L  +    F   VE I  +KGRV++TGIGKS  IG
Sbjct: 4   REEILSSAKNTLLTESRAIEQLVDYLNAD----FADLVETIFKLKGRVIVTGIGKSAIIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTP+ F+HA EA HGDLG+I RDDL++ +S SG++ E+K ++   ++ + 
Sbjct: 60  QKIVATLNSTGTPAIFMHAGEAIHGDLGIIQRDDLVLCISKSGNTPEIKVLIPLLKQGNN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+ +I  +  S +A  +D ++    E E+CP  LAPTTS   QL IGDALAI LLE R F
Sbjct: 120 PIASIVGDTNSYLAKQSDFIINATIEAEACPLNLAPTTSTTAQLVIGDALAICLLELRRF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF   HPGG LG         + S +  P ++    +   I  +++KR G  AVV++
Sbjct: 180 TSRDFAKFHPGGALGKRLYLKVRDLSSQNEKPQIEPEDDIRKVILEITKKRLGITAVVEQ 239

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            + +KG+IT+GD+ R   K    + LS +D+M  NPK I  D L   A+++++++NI+ +
Sbjct: 240 NE-VKGVITDGDLRRMMEKFTYFDKLSAKDIMSSNPKTIQGDELAVNALKIMKENNITQI 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD  +K  GI+H  DLL+ GII
Sbjct: 299 VVVDKLEKYQGIIHLHDLLKEGII 322


>gi|309972929|gb|ADO96130.1| Arabinose-5-phosphate isomerase [Haemophilus influenzae R2846]
          Length = 337

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 139/336 (41%), Positives = 202/336 (60%), Gaps = 15/336 (4%)

Query: 4   YFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           +F  F  +T    +L+  K + ++ A  S+  E   L  L   L GE    F+  V+ I 
Sbjct: 8   FFYDFAKITPISTALLGRKMNYLKIAQNSLSVESNALLQLSQRL-GE---DFNQVVDLIL 63

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A KGR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+S
Sbjct: 64  ACKGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYS 123

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++
Sbjct: 124 GETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALV 183

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLI 240
            LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D M +   +P +       
Sbjct: 184 TLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPTTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVI 296
           D +T+++E R G VA+V E ++LKGIIT+GDI R    N  + LN  + +D M  +PK I
Sbjct: 242 DCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTI 299

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 300 HQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|134301645|ref|YP_001121613.1| KpsF/GutQ family sugar isomerase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049422|gb|ABO46493.1| sugar isomerase, KpsF/GutQ family [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 323

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  K RV+ITG+GKSGHIG
Sbjct: 3   SHINNAIETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KSRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +   I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNGHNILGIVTMHDLIKL 320


>gi|126641282|ref|YP_001084266.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii ATCC
           17978]
          Length = 274

 Score =  236 bits (603), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 124/274 (45%), Positives = 171/274 (62%), Gaps = 6/274 (2%)

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++
Sbjct: 1   MGKSGHIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLM 60

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +   +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+
Sbjct: 61  PLIKHLGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAV 120

Query: 192 ALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALLE+R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR
Sbjct: 121 ALLEARGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKR 180

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            G   +VDE   L GI T+GD+ R   K    D+N L V +VM K P  I ++     A+
Sbjct: 181 LGLTTIVDEQDHLLGIFTDGDLRRLIDKQQGFDVN-LPVSEVMTKKPSTISQEARAVEAL 239

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           Q L Q  IS  +VVDD  K IG++   DL++ G+
Sbjct: 240 QQLNQKKISQFVVVDDQNKVIGVISMHDLIQAGV 273


>gi|157373870|ref|YP_001472470.1| arabinose-5-phosphate isomerase [Shewanella sediminis HAW-EB3]
 gi|157316244|gb|ABV35342.1| Arabinose-5-phosphate isomerase [Shewanella sediminis HAW-EB3]
          Length = 325

 Score =  236 bits (602), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 206/316 (65%), Gaps = 5/316 (1%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++I  +R  ++L++  Q   S +F  A   I    G+V++ G+GKSGHIG+K+++TLAS
Sbjct: 12  RNVIDIER--NALDNLYQYVDSAEFATACRLILECTGKVIVMGMGKSGHIGNKISATLAS 69

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGDLG+++ +D+I+ +S SG + E+  ++   +R  +P+IA+T + 
Sbjct: 70  TGTPAFFVHPGEASHGDLGVLSENDIILAISNSGEASEILTLMPVIKRMGLPIIAVTGKP 129

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  + + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+++DF + H
Sbjct: 130 ESNMAKLSIVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTKDDFALSH 189

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +  SDVMH    +PLV     + DA+  +S+K  G  AVVD+  KL GI 
Sbjct: 190 PGGSLGRKLLLKVSDVMHKASELPLVSHNICITDALYEISKKGLGMTAVVDDDNKLVGIF 249

Query: 268 TEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R    ++N    S+ D M +    + +D L   A++++ + +I+ L+V+D+ Q+
Sbjct: 250 TDGDLRRVIDAEVNLRKTSISDAMSRGCVTVSDDILAAEALKVMEEKDINGLIVIDEQQQ 309

Query: 326 AIGIVHFLDLLRFGII 341
            IG ++ LD+++ G+I
Sbjct: 310 PIGALNMLDMVKAGVI 325


>gi|254374617|ref|ZP_04990098.1| arabinose phosphate isomerase [Francisella novicida GA99-3548]
 gi|151572336|gb|EDN37990.1| arabinose phosphate isomerase [Francisella novicida GA99-3548]
          Length = 327

 Score =  236 bits (602), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 203/322 (63%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  KGRV+ITG+GKSGHIG
Sbjct: 7   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KGRVIITGMGKSGHIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +   I
Sbjct: 64  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHLDI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 124 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 183

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 184 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 242

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 243 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 302

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +G+V   DL++ 
Sbjct: 303 LAVVDNDHSILGMVTMHDLIKL 324


>gi|89256726|ref|YP_514088.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica LVS]
 gi|167010920|ref|ZP_02275851.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|187931753|ref|YP_001891738.1| phosphosugar isomerase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456981|ref|ZP_03665454.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254368031|ref|ZP_04984051.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica 257]
 gi|89144557|emb|CAJ79872.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica LVS]
 gi|134253841|gb|EBA52935.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica 257]
 gi|187712662|gb|ACD30959.1| phosphosugar isomerase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|282159084|gb|ADA78475.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 323

 Score =  236 bits (602), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  K RV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KSRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +   I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNGHNILGIVTMHDLIKL 320


>gi|167835393|ref|ZP_02462276.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis MSMB43]
          Length = 327

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 190/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L G+L  +F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALAGQLDGEFVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T+DD+ I +S SG S+EL AIL   +R    LIA+T    S +A  +D+ L   
Sbjct: 87  GDLGMVTKDDVFIAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLATLSDVHLNAG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V +G  L DA+  ++ KR G  AVVD+  ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDEVPAVPLGATLSDALFQITAKRMGMTAVVDDAGRVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM  +P+ I  D L   A++L+ +H I+ ++VVD+    IG ++  DL    +
Sbjct: 267 RRLPIIDVMTHDPRTIAPDHLAVEAVELMERHRINQMLVVDEHGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|304413070|ref|ZP_07394543.1| D-arabinose 5-phosphate isomerase [Candidatus Regiella insecticola
           LSR1]
 gi|304283913|gb|EFL92306.1| D-arabinose 5-phosphate isomerase [Candidatus Regiella insecticola
           LSR1]
          Length = 356

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/312 (41%), Positives = 192/312 (61%), Gaps = 9/312 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+  L+ L+  +  + S     A EKI   +G+VV+ GIGKSGHIG K+A+T ASTGTP+
Sbjct: 50  ERNALAQLDQYINHDFSH----ACEKIFNCQGKVVVMGIGKSGHIGRKIAATFASTGTPA 105

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EASHGDLGM+T  D+++ +S SG + E+ +++   +R  I LIA++   KS + 
Sbjct: 106 FFIHPTEASHGDLGMVTSQDIVLAISNSGETGEILSLIPILKRQKILLIAMSGNPKSNMG 165

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPT S    L +GDALA+ALL+ R F+   F + HPGG L
Sbjct: 166 EVADIHLCIKVPEEACPLGLAPTASTTATLVMGDALAVALLKKRRFTPQHFALSHPGGLL 225

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L V   ++MH G  IP V +   L DA+  +++K+ G   + D+  K+ G+ T+GD+
Sbjct: 226 GRKLLVRVDEIMHIGTEIPQVTLDASLRDALLEITQKKLGLTVICDDQMKIAGVFTDGDL 285

Query: 273 FRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R       DLN   + +VM      I  D L   A+ L++ HNI+VL+VV+D ++ +G+
Sbjct: 286 RRVLSDNTFDLNNAKIAEVMTSGGIHISADKLAVEALNLMQSHNITVLLVVED-ERLLGV 344

Query: 330 VHFLDLLRFGII 341
           VH  DLL+ GI+
Sbjct: 345 VHMHDLLKAGIV 356


>gi|117617703|ref|YP_858367.1| arabinose 5-phosphate isomerase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559110|gb|ABK36058.1| arabinose 5-phosphate isomerase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 331

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/296 (43%), Positives = 187/296 (63%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  A E I    G++V+TG+GKSGH+GSK+A+TLASTGTP+FF+H  EASHGDLGM
Sbjct: 36  LNDAFDQACEMILRCSGKIVVTGMGKSGHVGSKIAATLASTGTPAFFLHPGEASHGDLGM 95

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I+  DLII +S SG SDE+ A+L   +R  IPLI +T    S +A  A++ L +  E E+
Sbjct: 96  ISGGDLIIAISNSGESDEILALLPVLKRRGIPLICMTGNPASTMAKEANVHLCIKVEKEA 155

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP GLAPT+S    L +GDALA+ALLE+R F+ +DF + HPGG LG  L +   D+MHSG
Sbjct: 156 CPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFALSHPGGSLGKRLLLRVGDLMHSG 215

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
           + +P V I   +  A+  +S K  G  AV +   +L G+ T+GD+ R  +   D++   +
Sbjct: 216 ELLPQVGIDATISQALLEVSRKGLGMTAVANADGRLAGLFTDGDLRRILDLQVDIHHTPI 275

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             VM  N   +  + +   A++L+    I+ L+VVD  ++ +G  +  DLL+ G+I
Sbjct: 276 SRVMTVNCVTVGPEMMAAEAVKLMETRKINGLLVVDGDKRPLGAFNMHDLLKAGVI 331


>gi|329899109|ref|ZP_08272516.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC3088]
 gi|328920675|gb|EGG28155.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC3088]
          Length = 324

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/301 (44%), Positives = 186/301 (61%), Gaps = 4/301 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L  +L  QF  A E + A  GR+++TG+GKSGHI  K+A+TLASTGTP+ FVH  EAS
Sbjct: 24  ANLAQKLDQQFPKACELMLASTGRIIVTGMGKSGHIARKIAATLASTGTPAHFVHPGEAS 83

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGD+GMIT  D+++ LS SG++ E+  +L   +R  +PLIA+T    S +A  +D  L  
Sbjct: 84  HGDMGMITAQDVVVALSNSGTAVEILTLLPLLKRLGVPLIAMTGNPDSALALASDAHLDT 143

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT+S    L +GDALAIALLE+R F+  DF   HPGGKLG  L +  +
Sbjct: 144 GVETEACPLDLAPTSSTTTALVMGDALAIALLEARGFTAEDFAFSHPGGKLGRKLLLKVA 203

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM  G +IP V     LIDA+  +S+K  G   V+D+   L G+ T+GD+ R   K L+
Sbjct: 204 DVMREGYAIPRVNSATKLIDALLEISQKGLGMTTVIDQDDVLLGLFTDGDLRRTLDKGLD 263

Query: 282 TLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             S  + +VM    K I  + L   A+ ++ Q+ IS L VV +     G++H +DLLR G
Sbjct: 264 VTSTPIREVMTTGAKTIGANHLAAEALNIMEQNKISAL-VVAEGNSVRGVIHLMDLLREG 322

Query: 340 I 340
           I
Sbjct: 323 I 323


>gi|56459512|ref|YP_154793.1| sugar phosphate isomerase [Idiomarina loihiensis L2TR]
 gi|56178522|gb|AAV81244.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina loihiensis L2TR]
          Length = 325

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 192/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           EK+ +  L   L       F  A + +   KGRV++TG+GKSGHIG K+A+TLASTGTP+
Sbjct: 19  EKKAIEGLYQYLDD----NFDAACQTLFNCKGRVIVTGMGKSGHIGGKIAATLASTGTPA 74

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+   D++I +S SG + E+  I+   +R  +PLI++T +  S +A
Sbjct: 75  FFVHPGEASHGDLGMVAAQDVVIAISNSGETAEVLNIIPVIKRLGVPLISMTGKPGSTLA 134

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD  + +  E E+CP GLAPT S    L +GDA+A+ALL +R F+ +DF + HPGG L
Sbjct: 135 RLADTHVCIAVEQEACPLGLAPTASTTATLVMGDAMAVALLNARGFTADDFALSHPGGSL 194

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   DVMH+G+ +P++     + DA+  +S K  G  A+VDE Q+L GI T+GD+
Sbjct: 195 GKRLLLRLHDVMHTGERVPVIPADAIISDALLEMSRKGLGMTAIVDENQRLAGIFTDGDL 254

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      D++   + +VM ++     ED L   A++L++   I+ L++ +D  +  G +
Sbjct: 255 RRILDNRIDVHKTPIAEVMTRSCITANEDMLAAEALKLMQDRKINGLIITNDDGQPCGAM 314

Query: 331 HFLDLLRFGII 341
           +  DLL+ G++
Sbjct: 315 NMHDLLQAGVL 325


>gi|302877520|ref|YP_003846084.1| KpsF/GutQ family protein [Gallionella capsiferriformans ES-2]
 gi|302580309|gb|ADL54320.1| KpsF/GutQ family protein [Gallionella capsiferriformans ES-2]
          Length = 328

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 129/301 (42%), Positives = 187/301 (62%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  A++ I   +GRV+++G+GKSGHI  K+A+T++STGTP++FVH  EASH
Sbjct: 28  ALSQRLDDHFLQALDVILRCEGRVIVSGMGKSGHIARKIAATMSSTGTPAYFVHPGEASH 87

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D+ I LS+SG S EL  I+   +R    LI++T    S +A  AD+ L   
Sbjct: 88  GDLGMVAGSDVFIALSYSGESQELMTIVPIIKRQGAKLISMTGNPASSLARVADVHLNAA 147

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            + E+CP GLAPT S    LA+GDALA+ALL+++ FS  +F   HPGG LG  L     D
Sbjct: 148 VDKEACPMGLAPTASTTASLALGDALAVALLDAKGFSAENFARSHPGGSLGRRLLTLVRD 207

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SG  +PLV+ G  L +A+  +S K  G  A+VD    + GI T+GD+ R   K  D 
Sbjct: 208 VMRSGSRMPLVQEGAMLSEALLEMSRKGVGMTAIVDAHGGVLGIFTDGDLRRTLEKKLDF 267

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++  V+ VM  +P+ I E++L   A+QL+ Q+NIS ++VV+   + +G ++  DLL   +
Sbjct: 268 SSTPVKSVMSAHPRCIGEESLAVEAVQLMEQYNISQMLVVNTQHQLVGALNMHDLLHAKV 327

Query: 341 I 341
           I
Sbjct: 328 I 328


>gi|56707899|ref|YP_169795.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670370|ref|YP_666927.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115315134|ref|YP_763857.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254369585|ref|ZP_04985596.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254370390|ref|ZP_04986395.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874709|ref|ZP_05247419.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604391|emb|CAG45421.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320703|emb|CAL08804.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115130033|gb|ABI83220.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|151568633|gb|EDN34287.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|157122539|gb|EDO66674.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254840708|gb|EET19144.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 327

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 134/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  K RV+ITG+GKSGHIG
Sbjct: 7   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KSRVIITGMGKSGHIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +   I
Sbjct: 64  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 124 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 183

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 184 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 242

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 243 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 302

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 303 LAVVDNGHNILGIVTMHDLIKL 324


>gi|148556866|ref|YP_001264448.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
 gi|148502056|gb|ABQ70310.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
          Length = 330

 Score =  236 bits (602), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 122/299 (40%), Positives = 184/299 (61%), Gaps = 3/299 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L+  L   F  AV  + A +GR+V+TG+GKSGHI  K+A+T A+TG+P+ F+H AEA+H
Sbjct: 32  QLEAYLDDNFAGAVRMLDATQGRIVVTGMGKSGHIARKMAATFAATGSPAIFIHPAEAAH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+ + D +IVLS SGS+ EL  I+ + R   I +I I S   S V   +D+ L LP
Sbjct: 92  GDLGMVQQGDTLIVLSNSGSTPELTPIMQHCRSMRIRIIGIASRLDSPVMQASDVRLLLP 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           +  E+CP  +APT+S  M LA+GDAL +AL++ R  + ++   LHPGG +G   +  S++
Sbjct: 152 QVREACPSNIAPTSSTTMMLALGDALGMALMDLRGVARDNIKKLHPGGAIGLRLMAVSEM 211

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MH G S+PLV+   P+ + I  ++   FG   VVD+  +L G+IT+GD+ R+   DL   
Sbjct: 212 MHGGASLPLVRRDTPMREVIMTMTSMGFGAAGVVDDDGRLVGVITDGDLRRHV-GDLGDG 270

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIVHFLDLLRFGI 340
               VM +NPK +   TL   A+ ++    I+ + V++D +     GIVH  D +R+G+
Sbjct: 271 VAAAVMTRNPKTVPLGTLAEDALMIMNDCKITTVFVMEDERPDTPAGIVHIHDFVRYGL 329


>gi|301060757|ref|ZP_07201572.1| putative arabinose 5-phosphate isomerase [delta proteobacterium
           NaphS2]
 gi|300445154|gb|EFK09104.1| putative arabinose 5-phosphate isomerase [delta proteobacterium
           NaphS2]
          Length = 324

 Score =  236 bits (601), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 131/295 (44%), Positives = 185/295 (62%), Gaps = 3/295 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  ++   F  AV  I   +GRV++TG+GKSG +  K+++TL STGT SFF+H AEA HG
Sbjct: 20  LMDQIGPAFAEAVSLILKARGRVILTGMGKSGLVARKISATLNSTGTKSFFLHPAEAIHG 79

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM T DD+++ +S SG + E+  IL   R+  + +I+ T    S +A H+D+V+ +  
Sbjct: 80  DLGMATPDDILLAISNSGHTAEINKILPILRQMKVTIISFTGGLDSPMAQHSDLVIDVGV 139

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
           E E+CP GLAPT S    LA+GDALA+ LL+SR+FS+ DF   HPGG LG  L     DV
Sbjct: 140 EREACPLGLAPTASTTAALAMGDALAVVLLKSRHFSKKDFRRFHPGGSLGERLSFKVRDV 199

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M + D IP+V +G  + DA+T ++EK+ G   VVD  +KL GII++GD+ R   +  D+ 
Sbjct: 200 MSTDDHIPMVCLGSNIRDALTEINEKKMGATLVVDGDRKLAGIISDGDLRRALSRGDDIY 259

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + VED+M   PK I ED     A+ L+    I+ L++ D  QK  G+VH  DLL
Sbjct: 260 RMKVEDIMSATPKTIDEDATSAEAIALMELSAITHLIIADTHQKVKGMVHLHDLL 314


>gi|95928728|ref|ZP_01311474.1| KpsF/GutQ family protein [Desulfuromonas acetoxidans DSM 684]
 gi|95135073|gb|EAT16726.1| KpsF/GutQ family protein [Desulfuromonas acetoxidans DSM 684]
          Length = 325

 Score =  236 bits (601), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 133/326 (40%), Positives = 202/326 (61%), Gaps = 10/326 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           NS +  A  ++  E   + +L   + GE    F  AVE I A KGR+VI+G+GKSG I  
Sbjct: 5   NSIIDVARNTLKIEADAVLALHDRINGE----FCQAVELILACKGRLVISGMGKSGLICQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+AST+ASTGTP+ F+H AE  HGDLGM+ + D+++ +S SG ++E+  IL   +R  + 
Sbjct: 61  KIASTMASTGTPALFLHPAEGIHGDLGMLMKGDVVLAVSNSGETEEIVRILPVIKRLGLK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA++    S +A   D+ L +  + E+CP GLAPT S    LA+GDALA+ALL+ +NF 
Sbjct: 121 LIAMSGNPASTLARAGDVSLDISVDKEACPLGLAPTASTTATLAMGDALAVALLQEKNFQ 180

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF + HPGG LG  L +   D+MH+GD+IPLV     + DA+  ++ K+ G   VVD 
Sbjct: 181 AEDFALFHPGGALGKRLLLRVEDLMHTGDAIPLVAQTTTVKDALFEITNKKLGITGVVDA 240

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L G+ T+GD+ R   +D ++L   ++ VM ++PK +L   L   A+QL+ +++I+ L
Sbjct: 241 DNGLVGVFTDGDLRRCL-EDQHSLEHLMDQVMSRHPKRVLRFNLAAKALQLMEEYSITSL 299

Query: 318 MVVDDCQKA--IGIVHFLDLLRFGII 341
            V +  + A  +GI+H  DLL+ G++
Sbjct: 300 FVFEHEEDATPVGIIHLHDLLKAGVV 325


>gi|271498867|ref|YP_003331892.1| KpsF/GutQ family protein [Dickeya dadantii Ech586]
 gi|270342422|gb|ACZ75187.1| KpsF/GutQ family protein [Dickeya dadantii Ech586]
          Length = 328

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A R +++ E+  L+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QSAGRQVLSIERDSLAQLDQYIDD----NFSRACEKMFYCHGKVVVMGMGKSGHIGCKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI 
Sbjct: 69  ATFASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 MTGNPESTMAKAADIHLCVHVSQEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP V     L DA+  ++ K  G   +     +
Sbjct: 189 FALSHPGGALGRKLLLRINDIMHTGDEIPRVGQDASLRDALLEITRKNLGMTVICSPDDR 248

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R F  + DLN+  + DVM +    +   TL   A+ L++  +I+ L+V 
Sbjct: 249 IEGIFTDGDLRRVFDMNIDLNSAGIADVMTRGGIRVTPQTLAVDALNLMQSRHITSLLVA 308

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +   + +GIVH  D+LR G++
Sbjct: 309 EG-DRLLGIVHMHDMLRAGVV 328


>gi|90580194|ref|ZP_01236001.1| hypothetical sugar phosphate isomerase [Vibrio angustum S14]
 gi|90438496|gb|EAS63680.1| hypothetical sugar phosphate isomerase [Vibrio angustum S14]
          Length = 323

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/292 (42%), Positives = 193/292 (66%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F+ A + +   +G+V++ G+GKSGHIG KLA+TLASTGTP+FFVH  EASHGDLGMI ++
Sbjct: 33  FNKACQLVLDCQGKVIVMGMGKSGHIGRKLAATLASTGTPAFFVHPGEASHGDLGMIKQE 92

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG + E+ A+L   +R  IP+I++T +  S +A  A I L +  E E+CP  
Sbjct: 93  DVVIAISNSGEASEILALLPVIKRLGIPMISMTGKPMSSMAKMAVINLQITVEKEACPLN 152

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    L +GDALAI+++E+R F+ +DF + HPGG LG  L +  +DVMH+G  +P
Sbjct: 153 LAPTSSTTATLVMGDALAISVMEARGFTADDFALSHPGGALGRKLLMRIADVMHTGKMLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVM 289
           +++    + DA+  +S+K  G  A+V+  Q+L GI T+GD+ R  + H D++  S+ DVM
Sbjct: 213 IIEETASIKDALLEISKKGLGMTAIVNNKQQLSGIFTDGDLRRLLDNHVDIHNTSIGDVM 272

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             NP+ I    L    ++++    I+ L+V ++ Q  +G ++  DLL+ G++
Sbjct: 273 SCNPQTISPQLLAAEGLKIMEDRKINGLLVTENAQ-LVGALNMHDLLKAGVM 323


>gi|254229282|ref|ZP_04922700.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262393180|ref|YP_003285034.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|151938206|gb|EDN57046.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262336774|gb|ACY50569.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
          Length = 323

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 191/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ GIGKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEKACELILSNSGKVVVMGIGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISP 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S SG S+E+ ++    +R +I +I++T + +S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVLAISNSGESNEILSLFPVLKRLNIKIISMTGKPESNMAKLSDLHLQITVPQEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGEAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPNALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  NP     D L    + L++  NI+ L++  D +K +G ++  DLL+ G++
Sbjct: 272 MTTNPTTAHPDMLAVEGLNLMQNKNINALILCKD-EKIVGALNMHDLLKAGVM 323


>gi|254457639|ref|ZP_05071067.1| D-arabinose 5-phosphate isomerase [Campylobacterales bacterium GD
           1]
 gi|207086431|gb|EDZ63715.1| D-arabinose 5-phosphate isomerase [Campylobacterales bacterium GD
           1]
          Length = 320

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 123/294 (41%), Positives = 194/294 (65%), Gaps = 9/294 (3%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AVE + A KG++V+TG+GKSG IG+K+A+T ASTGTPSFF+H  EA HGDLGMI+++
Sbjct: 29  FDKAVEMVLACKGKLVVTGVGKSGLIGAKMAATFASTGTPSFFLHPTEALHGDLGMISQN 88

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S+SG S+EL +IL + +RF  PLI +T +  S +  ++D+V+ +  E E+CP  
Sbjct: 89  DVVIAISYSGESEELSSILPHIKRFKTPLIGMTRDRNSTLGKYSDLVIDVVVEKEACPLD 148

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           +APT+S  + LA+GDALA+ L+ +RNF ++DF   HPGG LG  LFV  SD+M   D++P
Sbjct: 149 IAPTSSTTLTLALGDALAVCLMRARNFKKSDFASFHPGGALGKKLFVKVSDLMKK-DNLP 207

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           ++     + +AI  +S  R G V + DE   L  ++++GDI R    D    S+E+ ++K
Sbjct: 208 IISKDTKVKEAIIEISHGRLGTVLIADENNSLIALVSDGDIRRALLAD--DFSLEENVLK 265

Query: 292 ----NPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               NP+ + ++ +L + A+ ++ +  I +L+V D  +K  G++H   L+  GI
Sbjct: 266 YATQNPRTLDDENILASEALVIIEEMKIQLLVVTDKNKKIKGVLHIHTLIEKGI 319


>gi|295132999|ref|YP_003583675.1| sugar binding/sugar isomerase domain-containing protein
           [Zunongwangia profunda SM-A87]
 gi|294981014|gb|ADF51479.1| sugar binding/sugar isomerase domain-containing protein
           [Zunongwangia profunda SM-A87]
          Length = 321

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 139/326 (42%), Positives = 199/326 (61%), Gaps = 10/326 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++   +  A  ++  E + +++LE  +  E    F  AVE I   KGRV++TGIGKS  I
Sbjct: 3   LQQKILNVAKETVKIEAKAIANLEHLIDNE----FVEAVENIYNSKGRVIVTGIGKSAVI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSK+ +TL STGTP+ F+HAA+A HGDLG+I RDD++I +S SG+S E+K ++ + + F 
Sbjct: 59  GSKIVATLNSTGTPAIFMHAADAIHGDLGIIQRDDIVICISKSGNSPEIKVLVPFIKDFH 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIAIT+   S +   +D +L    E E+CP+ LAPTTS   QL IGDALAI LLE R 
Sbjct: 119 NTLIAITANRDSFLGKSSDFILNSYVEKEACPNNLAPTTSTTAQLVIGDALAICLLELRG 178

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS+ DF   HPGG LG  L++   D+    +  P V     + DAI I+SE   G  AV+
Sbjct: 179 FSKEDFAKYHPGGSLGKKLYLRVKDIAQQ-NMKPSVSPETTVTDAIIIISENMLGVTAVL 237

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E  K+ GIIT+GDI R    + +   L+  D+M  +PK I E+ L T A+ LL ++ IS
Sbjct: 238 -ENDKIVGIITDGDIRRMLKNNDEFKNLTAGDIMSTSPKSIDEEALATQALDLLEENKIS 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+   + + + G+VH  +L+R GI+
Sbjct: 297 QLLATKNGKYS-GVVHIHNLIREGIL 321


>gi|254373168|ref|ZP_04988657.1| phosphosugar isomerase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570895|gb|EDN36549.1| phosphosugar isomerase [Francisella novicida GA99-3549]
          Length = 323

 Score =  236 bits (601), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  KGRV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KGRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +   I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHLDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+ D+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDSDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNDHNILGIVTMHDLIKL 320


>gi|220933911|ref|YP_002512810.1| Arabinose-5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995221|gb|ACL71823.1| Arabinose-5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 325

 Score =  236 bits (601), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 135/327 (41%), Positives = 201/327 (61%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L  + T Q A+  +  E + +  L+  +      QF  A + +    GR+V+TG+GKSGH
Sbjct: 3   LHPDQTRQLAIAVLDTEAQAILDLKERIDD----QFIRACKFLLGCTGRIVVTGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IGSK+A+TLASTG+P+FFVH  EASHGDLGMIT  D+++ +S SG +DEL  IL   RR 
Sbjct: 59  IGSKIAATLASTGSPAFFVHPGEASHGDLGMITAGDVVLAMSNSGETDELLTILPIIRRL 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLIA+T    S +A  A + L +    E+CP GLAPT+S    LA+GDALA++LLE+R
Sbjct: 119 GVPLIAMTGNKGSTLAREATVSLDISVAKEACPLGLAPTSSTTATLALGDALAVSLLEAR 178

Query: 198 NFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF   HPGG+LG   +   +D+MH+G+ IP V    PL +A+  ++ +  G   V
Sbjct: 179 GFTADDFARSHPGGRLGRRLLLHVADIMHTGERIPRVGADAPLREALLEITRQGLGMTVV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   ++ G+ T+GD+ R   K  D++  ++ ++M +  K      L   A++L+  H I
Sbjct: 239 VDAEDQVMGVYTDGDLRRTLDKGIDVHNTTIGEIMTRQFKQARPAMLAVEALKLMEDHKI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           S L V+DD  K +G ++  DLLR G++
Sbjct: 299 SALPVMDDEGKLMGALNMHDLLRSGVV 325


>gi|293389941|ref|ZP_06634275.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950475|gb|EFE00594.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 311

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 191/311 (61%), Gaps = 13/311 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++  E+  L  L+  L G     F   V  I   KGR+VI GIGKSG +G K+ +T 
Sbjct: 7   AQETLGVEENALGQLKQRLDG----TFADVVNLILNCKGRLVIGGIGKSGLVGKKMVATF 62

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA+TS
Sbjct: 63  ASTGTPSFFLHPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKIIALTS 122

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A HAD VL +  E E CP+ LAPTTS I+ +A+GDALA+ L+ +R+F   DF  
Sbjct: 123 NKNSTLARHADYVLDITVEREVCPNNLAPTTSVIVTMALGDALAVCLMRARDFQPEDFAK 182

Query: 207 LHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG   +C   D M +   +P+  +     D ++I++E R G VA+V E Q+L+G
Sbjct: 183 FHPGGSLGRRLLCRVKDQMQT--HLPIAALTTTFTDCLSIMNEGRMG-VALVMEQQQLRG 239

Query: 266 IITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           IIT+GDI R    N  + LN  + +++M  +PK I +DT ++ A   ++ H I  L+VVD
Sbjct: 240 IITDGDIRRALTANGAETLNK-TAQELMTSHPKTIHQDTYISEAENYMKAHKIHSLVVVD 298

Query: 322 DCQKAIGIVHF 332
           D Q  +G+V F
Sbjct: 299 DAQHVVGLVEF 309


>gi|284040793|ref|YP_003390723.1| KpsF/GutQ family protein [Spirosoma linguale DSM 74]
 gi|283820086|gb|ADB41924.1| KpsF/GutQ family protein [Spirosoma linguale DSM 74]
          Length = 322

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 184/296 (62%), Gaps = 5/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  QF+  V+ I    GR+V+TG+GKS  +G K+ +T+ STGTPS F+HAA+A HGDLGM
Sbjct: 29  LDEQFNETVDTILNSSGRLVVTGVGKSALVGQKIVATMNSTGTPSLFMHAADAIHGDLGM 88

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I  +D+++++S SG++ E+K ++   +R  + LIA+ S   S +A HAD VL    E E+
Sbjct: 89  IQSNDVVLLISKSGNTAEIKVLIPLLKRTGVRLIAMVSARDSYLANHADHVLHAYAEMEA 148

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
            P  LAPTTS  + LAIGDALA++LLE R F+  DF   HPGG LG  L++  +D+    
Sbjct: 149 DPLNLAPTTSTTVALAIGDALAVSLLEIRGFTRQDFARYHPGGSLGKRLYLKVADIF-PH 207

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           +  P V  G PL D I  +S  R G  AVVDE   L GI+T+GDI R    H     L  
Sbjct: 208 NKCPRVVPGTPLRDVIFTISANRLGATAVVDEEGTLAGIVTDGDIRRTAYDHSTFWELCA 267

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +DVM   P  +  D    VA+QL+++ +IS L+VV+D Q  +G +H  DLLR G+I
Sbjct: 268 QDVMTTQPVCVAPDEYAVVALQLMQERDISQLVVVEDTQ-VLGFIHLHDLLREGLI 322


>gi|161616325|ref|YP_001590290.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365689|gb|ABX69457.1| hypothetical protein SPAB_04133 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 328

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 189/311 (60%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYIDQ----NFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++
Sbjct: 259 RRVFDMGGDMLQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVL 317

Query: 331 HFLDLLRFGII 341
           H  DLLR G++
Sbjct: 318 HMHDLLRAGVV 328


>gi|238764274|ref|ZP_04625226.1| Arabinose 5-phosphate isomerase [Yersinia kristensenii ATCC 33638]
 gi|238697555|gb|EEP90320.1| Arabinose 5-phosphate isomerase [Yersinia kristensenii ATCC 33638]
          Length = 345

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 136/333 (40%), Positives = 198/333 (59%), Gaps = 9/333 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           + G  L      Q A + ++  E+ GL+ L+  +  +    F  A E I    G+VV+ G
Sbjct: 18  QPGEDLQPKVDFQQAGKQVLQIEREGLAQLDQYINDD----FARACEAIFNCHGKVVVMG 73

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++
Sbjct: 74  MGKSGHIGCKIAATFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALI 133

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I LI +++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+
Sbjct: 134 PVLKRQKIQLICMSNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAV 193

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALL++R F++ DF + HPGG LG  L +  SD+MH+G  IP V     L DA+  ++ K 
Sbjct: 194 ALLQARGFTQEDFALSHPGGALGRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKN 253

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   + D+   +KGI T+GD+ R F    DLN   + DVM K    +  + L    + L
Sbjct: 254 LGLTVICDDLMMIKGIFTDGDLRRVFDMGIDLNHAKIADVMTKGGIRVRPNLLAVDVLNL 313

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +   +I+ ++V D  Q  +G+VH  D+LR G++
Sbjct: 314 MESRHITAVLVADGDQ-LLGVVHMHDMLRAGVV 345


>gi|91225582|ref|ZP_01260656.1| putative polysialic acid capsule expression protein [Vibrio
           alginolyticus 12G01]
 gi|269968001|ref|ZP_06182039.1| Arabinose 5-phosphate isomerase [Vibrio alginolyticus 40B]
 gi|91189702|gb|EAS75976.1| putative polysialic acid capsule expression protein [Vibrio
           alginolyticus 12G01]
 gi|269827358|gb|EEZ81654.1| Arabinose 5-phosphate isomerase [Vibrio alginolyticus 40B]
          Length = 323

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 191/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ GIGKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEKACELILSNNGKVVVMGIGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISP 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S SG S+E+ ++    +R +I +I++T + +S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVLAISNSGESNEILSLFPVLKRLNIKIISMTGKPESNMAKLSDLHLQITVPQEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGEAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  NP     D L    + L++  NI+ L++  D +K +G ++  DLL+ G++
Sbjct: 272 MTTNPTTAHPDMLAVEGLNLMQNKNINALILCKD-EKIVGALNMHDLLKAGVM 323


>gi|85859856|ref|YP_462058.1| arabinose-5-phosphate isomerase [Syntrophus aciditrophicus SB]
 gi|85722947|gb|ABC77890.1| arabinose-5-phosphate isomerase [Syntrophus aciditrophicus SB]
          Length = 336

 Score =  235 bits (600), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 125/303 (41%), Positives = 187/303 (61%), Gaps = 5/303 (1%)

Query: 42  ESSLQ--GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ES LQ  G L   F  AV+ I    GRV++TGIGKSG IG K+ +T+ STGT + F+H  
Sbjct: 25  ESILQLIGRLDGNFSRAVDIIYRSPGRVIVTGIGKSGLIGKKIVATMTSTGTQALFLHPV 84

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           E  HGDLG++T+DD+++ +S SG ++E+  ++   ++   PLI+ T    S +A  +D V
Sbjct: 85  EGLHGDLGIVTKDDVLLAISNSGETEEVNRLISSVQKIGTPLISFTGNPSSTMARASDAV 144

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFV 218
           + +  E E+CP GLAPT+S+   LA+GDALA+AL++   FSE DFY  HPGG LG  L  
Sbjct: 145 IDVGVEREACPFGLAPTSSSTATLAMGDALAVALIDKHKFSEKDFYKFHPGGSLGQRLRA 204

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              DVM SG  +P +  G   IDAI++L EK  G + V DE  +L+GI+T+GD+ R   K
Sbjct: 205 KVRDVMISGSDMPQIYAGTSAIDAISVLDEKNKGFILVTDELNRLQGILTDGDVRRLVRK 264

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D++   ++D+M ++PK I +   L   ++ +++  I+ L VV+   +  G +H  D+L
Sbjct: 265 GLDISEKRIDDIMTRSPKSIQDSWSLAQTIEFMQKDEITALAVVNGGNQLQGYIHLHDIL 324

Query: 337 RFG 339
             G
Sbjct: 325 GRG 327


>gi|332163082|ref|YP_004299659.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604038|emb|CBY25536.1| arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667312|gb|ADZ43956.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862756|emb|CBX72898.1| arabinose 5-phosphate isomerase [Yersinia enterocolitica W22703]
          Length = 328

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 189/311 (60%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 23  EREGLAQLDQYINDD----FAQACEAIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI +++  +S + 
Sbjct: 79  FFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALIPVLKRQKIQLICMSNNPESTMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 199 GRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D  Q  +G+V
Sbjct: 259 RRVFDMGIDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVADGDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|300113016|ref|YP_003759591.1| KpsF/GutQ family protein [Nitrosococcus watsonii C-113]
 gi|299538953|gb|ADJ27270.1| KpsF/GutQ family protein [Nitrosococcus watsonii C-113]
          Length = 330

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 131/302 (43%), Positives = 195/302 (64%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L+  ++  F  A + + A +GR+VI G+GKSGHIG K+A+TLASTGTP+FFVH  EAS
Sbjct: 29  AALRTRINENFAAACKYMLACEGRIVILGMGKSGHIGGKIAATLASTGTPAFFVHPGEAS 88

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMIT  D+++ LS SG ++E+  IL   +R S+PLIA+T + +S +   AD+ + +
Sbjct: 89  HGDLGMITEKDVVLALSNSGETEEICTILPLIKRLSVPLIALTGQPQSTLGRVADVHIDI 148

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-S 221
             E E+CP GLAPT S+   L +GDALAIALLESR F+  DF   HPGG+LG   +   S
Sbjct: 149 SVEKEACPLGLAPTASSTATLVMGDALAIALLESRGFTAEDFARSHPGGRLGRRLLLRIS 208

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH G+ IP +     L  A+  ++ K  G  AVV+      GI T+GD+ R   +  D
Sbjct: 209 DIMHKGEEIPAILENVLLSAALLEMTRKGLGMTAVVNAQNHAVGIFTDGDLRRALDQGID 268

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++   + ++M  N K +  + L   A+Q+++++ I+ L+VVD  Q+ IG ++  DLLR G
Sbjct: 269 VHATPITEIMTANCKTLGPNLLAAEALQIMQRYRINALLVVDTEQRLIGALNMHDLLRAG 328

Query: 340 II 341
           ++
Sbjct: 329 VL 330


>gi|256419822|ref|YP_003120475.1| KpsF/GutQ family protein [Chitinophaga pinensis DSM 2588]
 gi|256034730|gb|ACU58274.1| KpsF/GutQ family protein [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 140/332 (42%), Positives = 201/332 (60%), Gaps = 17/332 (5%)

Query: 19  MKNSTV----QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           MKN TV    + A R++  E   +S L+  + G+    F  AVE I    GR+VI+GIGK
Sbjct: 1   MKNRTVINIAEVAKRTLSLEATAISDLKQYINGD----FEKAVEWIAECAGRLVISGIGK 56

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  IG K+ +TL STGTP+ F+HAA+A HGDLGMI  DD+I+ +S SG+S E+K ++   
Sbjct: 57  SAIIGQKIVATLNSTGTPAIFMHAADAIHGDLGMIQHDDIILCISKSGNSPEIKVLVPLV 116

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + F   LIA+    +S +A  A ++L    + E+CP+ LAPTTS   QLA+GDALA+ L+
Sbjct: 117 KNFGNRLIAMVGNTESFLAREAHLILNTSVDQEACPNNLAPTTSTTAQLAMGDALAVCLI 176

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDV--MHSGDSIPLVKIGCPLIDAITILSEKRF 251
           E   FS  DF  +HPGG LG  L++   D+  +H     P V     L + I  +S    
Sbjct: 177 EWHGFSAADFAKVHPGGTLGKKLYLKVGDLSRLHQA---PQVTKQSALKEVIVAISSGML 233

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           G  AV+D    L GIIT+GD+ R   K +   +++ E +M  +PK I ED L   A++++
Sbjct: 234 GVTAVLDAEGSLSGIITDGDLRRMLEKGIPGESVTAEVIMSTHPKTIQEDELAVNALEMM 293

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           RQH+I+ L+V+ D ++ IGI+H  DL+R GII
Sbjct: 294 RQHDITQLLVLKD-KRYIGIIHLHDLIREGII 324


>gi|157803762|ref|YP_001492311.1| KpsF protein [Rickettsia canadensis str. McKiel]
 gi|157785025|gb|ABV73526.1| KpsF protein [Rickettsia canadensis str. McKiel]
          Length = 319

 Score =  235 bits (600), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 123/309 (39%), Positives = 192/309 (62%), Gaps = 5/309 (1%)

Query: 35  KRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           KR +SS  S+L+     +   F+  +E + +  GRV+ TGIGKSG+I  K+A++ +STG 
Sbjct: 12  KRVISSEASALEKLSENIPEDFNTIIEFLLSFTGRVIFTGIGKSGYIARKIAASFSSTGM 71

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P+F++H AEASHGDLGM+TRDDL+I++S SG + EL  I+ Y    SI + A+T    S 
Sbjct: 72  PAFYLHPAEASHGDLGMVTRDDLVIMISNSGETKELFNIIEYCNNSSIKIAAMTMNKNST 131

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A  +D +L +P+  E+   G+ PT S+++ L++GDAL   + E R F+++DF V HPGG
Sbjct: 132 LAKRSDFLLIVPEYSEASVIGV-PTISSLIMLSLGDALMTVIHEKRGFTKDDFKVYHPGG 190

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G       ++M SGD IPLV       + I ++++KR GC  V D+ Q L GIIT+GD
Sbjct: 191 TIGANLTKIKNLMRSGDEIPLVYEDTSFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGD 250

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R+ +  ++  +  ++M KNP  I  + L   A+ L++  NI+ + ++ D     GI+H
Sbjct: 251 LRRHINAQIHLKTASNIMTKNPIHISSEILAKEALNLMKAKNITNVPII-DANIITGIIH 309

Query: 332 FLDLLRFGI 340
             DLLR G+
Sbjct: 310 IHDLLRIGV 318


>gi|145297401|ref|YP_001140242.1| sugar phosphate isomerase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850173|gb|ABO88494.1| sugar phosphate isomerase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 331

 Score =  235 bits (599), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 188/296 (63%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  A E +    G++V+TG+GKSGHIGSK+A+TLASTGTP+FF+H  EASHGDLGM
Sbjct: 36  LNDAFDKACELVLRCSGKIVVTGMGKSGHIGSKIAATLASTGTPAFFLHPGEASHGDLGM 95

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I+  DLII +S SG SDE+ A+L   +R  I LI +T    S +A  A++ L +  + E+
Sbjct: 96  ISSGDLIIAISNSGESDEILALLPVLKRRGIQLICMTGNPASTMAKEANVHLCIKVDKEA 155

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP GLAPT+S    L +GDALA+ALLE+R F+ +DF + HPGG LG  L +   D+MHSG
Sbjct: 156 CPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFALSHPGGSLGKRLLLRVGDLMHSG 215

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
           D +P V I   +  A+  +S K  G  AVV++   L G+ T+GD+ R  +   D++  S+
Sbjct: 216 DLLPQVGIDATISQALLEVSRKGLGMTAVVNDEGLLAGLFTDGDLRRILDLQVDIHHTSI 275

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             VM  N   +  + +   A++L+    I+ L+VVD  ++ +G  +  DLL+ G+I
Sbjct: 276 AKVMTTNCVTVGPEMMAAEAVKLMETRKINGLLVVDGDKRPLGAFNMHDLLKAGVI 331


>gi|292490483|ref|YP_003525922.1| KpsF/GutQ family protein [Nitrosococcus halophilus Nc4]
 gi|291579078|gb|ADE13535.1| KpsF/GutQ family protein [Nitrosococcus halophilus Nc4]
          Length = 338

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 131/306 (42%), Positives = 197/306 (64%), Gaps = 3/306 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +S  ++L+  ++  F  A + + A   R+V+ G+GKSGHIG K+A+TLASTGTP+FFVH 
Sbjct: 33  ASAVAALRTRINGNFAAACKYMLACTARIVVLGMGKSGHIGGKIAATLASTGTPAFFVHP 92

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            EASHGDLGMIT  D+++ LS SG ++E+  IL   +R  +PLIA+T + +S +   AD+
Sbjct: 93  GEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLGVPLIALTGQPQSTLGKAADV 152

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
            + +  E E+CP GLAPT S+   LA+GDALAIALLE+R F+  DF   HPGG+LG   +
Sbjct: 153 HIDISVEKEACPLGLAPTASSTATLAMGDALAIALLEARGFTAEDFARSHPGGRLGRRLL 212

Query: 219 CA-SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              SD+MH G++IP V     L +A+  ++ K  G  AVVD   ++ GI T+GD+ R   
Sbjct: 213 LRISDIMHRGEAIPAVTEDVLLSNALLEMTRKGLGMTAVVDVQNQVVGIFTDGDLRRALD 272

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D++   +  +M  + K +  + L   A+Q++++H I+ L+VVD  Q  IG ++  DL
Sbjct: 273 RGIDVHATPIAAIMTTHCKTLGPELLAAEALQMMQRHRINALLVVDHEQHLIGALNMHDL 332

Query: 336 LRFGII 341
           LR G++
Sbjct: 333 LRAGVL 338


>gi|149194802|ref|ZP_01871896.1| KpsF/GutQ [Caminibacter mediatlanticus TB-2]
 gi|149134961|gb|EDM23443.1| KpsF/GutQ [Caminibacter mediatlanticus TB-2]
          Length = 314

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 121/289 (41%), Positives = 192/289 (66%), Gaps = 8/289 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVE     KG++++TG+GKSG IGSK+A+TLASTGTPSFF+H  EA HGDLGMIT+DD +
Sbjct: 29  AVEIAYNTKGKLIVTGVGKSGLIGSKIAATLASTGTPSFFIHPTEALHGDLGMITKDDSV 88

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           + +S+SG S+EL  IL + +RF +PLIA+T +  S +A +AD ++ +  + E+CP  +AP
Sbjct: 89  LAISYSGESEELIKILPHIKRFEVPLIAMTGDKNSTLAKYADALINIHIDKEACPLNVAP 148

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
           T+S  + LA+GDALA+ L++ RNF++ DF   HPGG LG  LF+   D+M   ++ P+  
Sbjct: 149 TSSTTLTLAMGDALAVCLMKKRNFTKEDFASFHPGGSLGKKLFIKVKDLMK--ENFPIAN 206

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
               L +AI  ++E + G +  + E  +++ I+++GD+ R       DL   ++E    K
Sbjct: 207 KDDNLKEAIIKMTEGKLGHILFL-EDNRVRAILSDGDLRRAMMSEDFDLEKKAIE-FATK 264

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           NPK I +D L + A++ + ++ I +L VV++ ++ +G++H  DL+  GI
Sbjct: 265 NPKTIKKDILASDALKFMEENKIQLLPVVNEKEEVLGVIHIHDLVEAGI 313


>gi|241116892|ref|XP_002401659.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215493203|gb|EEC02844.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 282

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 119/283 (42%), Positives = 181/283 (63%), Gaps = 2/283 (0%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           E + + KGRV++TGIGKSG+I  K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+
Sbjct: 1   EFLLSFKGRVILTGIGKSGYIAKKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIM 60

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           LS SG + EL  I+ Y +  SI + A+T    S +A  +D +L +P+ PE+   G APT 
Sbjct: 61  LSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIG-APTI 119

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
           S+++ L++GDAL   + E R F+++DF + HPGG +G       ++M SGD IPLV    
Sbjct: 120 SSLIMLSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKVKNLMRSGDEIPLVYEDT 179

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
              + I ++++KR GC  V D+ Q L GIIT+GD+ R+ +  +       +M KNP  I 
Sbjct: 180 SFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGDLRRHINDQIYLKIASSIMTKNPIHIS 239

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +     A+ L++  NI+ + +VD+    IGI+H  DLLR G+
Sbjct: 240 SEIFAKEALNLMKAKNITNIPIVDN-NVIIGIIHIHDLLRIGV 281


>gi|170691488|ref|ZP_02882653.1| KpsF/GutQ family protein [Burkholderia graminis C4D1M]
 gi|170143693|gb|EDT11856.1| KpsF/GutQ family protein [Burkholderia graminis C4D1M]
          Length = 327

 Score =  235 bits (599), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 190/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDDAFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTADDVFLALSNSGETEELVAILPLIKRIGAKLIAMTGRPSSSLAKLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L    SD
Sbjct: 147 VAKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVSD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD+  ++KGI T+GD+ R   +  D 
Sbjct: 207 VMRTGDQVPKVTPDATVRDALFQLTAKRMGMTAIVDQEDRVKGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             LS+  VM  +P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RALSIAAVMTADPRTIGPDHLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|85713031|ref|ZP_01044068.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina baltica OS145]
 gi|85693134|gb|EAQ31095.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina baltica OS145]
          Length = 325

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 125/296 (42%), Positives = 189/296 (63%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F+ A + +   KGR+++TG+GKSGHIG K+A+TLASTG+P+FFVH  EASHGDLGM
Sbjct: 30  LDDNFNRACQAMFDCKGRIIVTGMGKSGHIGGKIAATLASTGSPAFFVHPGEASHGDLGM 89

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +T  D++I +S SG + E+  I+   +R  + +IA+T   +S +A  AD+ + +  E E+
Sbjct: 90  VTDSDIVIAISNSGETGEILNIIPVMKRLGVTIIAMTGNPESTLATLADVHVCIRVEQEA 149

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP GLAPT S    L +GDALA+ALL +R F+ +DF + HPGG LG  L +  SDVMH+G
Sbjct: 150 CPLGLAPTASTTASLVMGDALAVALLNARGFTADDFALSHPGGSLGKRLLLRLSDVMHTG 209

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
           D +P V+    + DA+  +S K  G  ++VDE  +L GI T+GD+ R  +   D++T  +
Sbjct: 210 DRVPQVEQDALIRDALLEISRKGLGMTSIVDEHGRLAGIFTDGDLRRILDSRVDVHTSKI 269

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            D M +      E+ L   A++L++   I+ L++VD   K  G ++  DLL+ G++
Sbjct: 270 ADFMTRTCVTADENMLAAQALKLMQDRKINGLIIVDHDGKPHGAMNMHDLLQAGVV 325


>gi|292489535|ref|YP_003532423.1| putative phosphosugar isomerase [Erwinia amylovora CFBP1430]
 gi|292898251|ref|YP_003537620.1| phosphosugar binding protein [Erwinia amylovora ATCC 49946]
 gi|291198099|emb|CBJ45202.1| putative phosphosugar binding protein [Erwinia amylovora ATCC
           49946]
 gi|291554970|emb|CBA22970.1| putative phosphosugar isomerase [Erwinia amylovora CFBP1430]
 gi|312173707|emb|CBX81961.1| putative phosphosugar isomerase [Erwinia amylovora ATCC BAA-2158]
          Length = 321

 Score =  235 bits (599), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 131/324 (40%), Positives = 191/324 (58%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L + L       F  A E ++A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIATELSGAMNLAARLDD----HFVQACEMMRACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GKKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T +  S +A  AD V+ +  + E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGKPTSPLAMAADQVINIHTDREACPLGLAPTSSAVNTLIMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT L  C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDIMRKGEKLPRITRDVTVGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+   L G+ T+GD+ R  HK  N    +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DDAGVLIGVFTDGDLRRWLHKGENIQAGISRVMTVGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD+  +  G ++  D+   GI
Sbjct: 297 APVVDEQGRVTGAINLHDIHDAGI 320


>gi|123443937|ref|YP_001007908.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090898|emb|CAL13780.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 325

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/311 (42%), Positives = 189/311 (60%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 20  EREGLAQLDQYINDD----FTQACEAIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPS 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI +++  +S + 
Sbjct: 76  FFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALIPVLKRQKIQLICMSNNPESTMG 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 136 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 195

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 196 GRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D  Q  +G+V
Sbjct: 256 RRVFDMGIDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVADGDQ-LLGVV 314

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 315 HMHDMLRAGVV 325


>gi|88811868|ref|ZP_01127121.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrococcus mobilis Nb-231]
 gi|88790752|gb|EAR21866.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrococcus mobilis Nb-231]
          Length = 337

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/319 (41%), Positives = 189/319 (59%), Gaps = 5/319 (1%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           C L   + E    S L  +L   +   F  A   +   +GRVV+TG+GKSGHIG KLA+T
Sbjct: 21  CQLGRAVIEVEAASIL--ALGQRIGHDFARACRLLLDCRGRVVVTGMGKSGHIGGKLAAT 78

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FFVH  EASHGDLGMIT  D +I LS SG + E+  +L   +R  +PLIA+T
Sbjct: 79  LASTGTPAFFVHPGEASHGDLGMITASDAVIALSNSGETREITILLPLIKRLDVPLIALT 138

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A + + +    E+CP GLAPT+S    LA+GDALA+ALL++R F+  DF 
Sbjct: 139 GNPGSTLARAASVHIDISVTEEACPLGLAPTSSTTATLAMGDALAVALLDARGFTREDFA 198

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L +   D+MH G+ IP V     L  A+  ++ K  G   VVD   ++ 
Sbjct: 199 RSHPGGSLGRRLLLRIEDIMHMGERIPRVAPETLLSHALVEMTNKGLGMTTVVDTEGRVL 258

Query: 265 GIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R  +   D++   + +VM    + +   +L   A+QL+ +H I+ L+VVD 
Sbjct: 259 GIFTDGDLRRALDHQIDVHNTRMAEVMTPGGRTVQAHSLAAEALQLMEKHKINALLVVDS 318

Query: 323 CQKAIGIVHFLDLLRFGII 341
             + IG ++  DLL+ G++
Sbjct: 319 ENRLIGALNMHDLLQAGVV 337


>gi|317494036|ref|ZP_07952452.1| KpsF/GutQ family sugar isomerase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917809|gb|EFV39152.1| KpsF/GutQ family sugar isomerase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 328

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  + E I +  G+VV+ G+GKSGHIG K+A+TLASTGTP+
Sbjct: 23  EREGLAQLDQYINED----FTKSCEAILSCLGKVVVMGMGKSGHIGRKIAATLASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM++  D+++ +S SG S E++A++   +R  + LI +T+   S + 
Sbjct: 79  FFVHPGEASHGDLGMVSSHDIVLAISNSGESHEIQALIPVLKRQKVKLICMTNNPDSSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 KAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  +P V     L DA+  ++ K  G   + D+  K++GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGSELPHVSRDASLRDALLEITRKNLGLTVICDDLMKIEGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      I  + L   A+ L++  +I+ L+V D  Q  IG+V
Sbjct: 259 RRIFDLGVDLNNAKIADVMTSGGIRIRPNALAVDALNLMQARHITSLLVADGDQ-LIGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|319776077|ref|YP_004138565.1| phosphosugar isomerase [Haemophilus influenzae F3047]
 gi|317450668|emb|CBY86888.1| probable phosphosugar isomerase [Haemophilus influenzae F3047]
          Length = 311

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 135/314 (42%), Positives = 191/314 (60%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  S+  E   L  L   L GE    F+  V+ I A KGR+VI GIGKSG IG K+ 
Sbjct: 4   LQIAQNSLSVESNALLQLSQRL-GE---DFNQVVDLILACKGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D+   ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPVDIVMLISYSGETDDANKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   D
Sbjct: 120 VTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPED 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V E ++
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 237 LKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|297537430|ref|YP_003673199.1| KpsF/GutQ family protein [Methylotenera sp. 301]
 gi|297256777|gb|ADI28622.1| KpsF/GutQ family protein [Methylotenera sp. 301]
          Length = 334

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 140/323 (43%), Positives = 202/323 (62%), Gaps = 7/323 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           ++ K +T++ A   ++ E   +++L + L G    QF  AV  I   KGRVV++G+GKSG
Sbjct: 11  AIAKQTTLELARDVLLLEASEINALATRLDG----QFTDAVALILQCKGRVVVSGMGKSG 66

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+ASTLASTGTP+FF+H AEASHGDLGMIT  D++I LS SG SDE+ AI+   +R
Sbjct: 67  HIGGKIASTLASTGTPAFFMHPAEASHGDLGMITAGDIVIALSNSGESDEILAIVPPLKR 126

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAIT  + S +A  ADI L+     E+CP GLAPT+S  + LA+GDALA+ +L+ 
Sbjct: 127 LGASIIAITGNDASTLAKAADIHLSAHVAKEACPLGLAPTSSTTVALALGDALALCVLDQ 186

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R+F+  DF   HPGG LG  L +  +D+M +G  +P V I   L + +  ++ K  G  A
Sbjct: 187 RDFTAEDFARSHPGGSLGRRLLIHVNDLMRTGAQVPQVTINATLSEGLLEMTRKGLGLTA 246

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +VD      GI T+GD+ R F +  D+ T  ++DVM +NP  I +  L   A++++ Q  
Sbjct: 247 IVDSNNMPIGIFTDGDLRRAFEQKVDVATSGIKDVMHQNPSTIHQGKLAIEAVEMMEQRK 306

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I+ L+V DD    +G ++  DLL
Sbjct: 307 INALLVTDDAGVLVGALNMHDLL 329


>gi|325294808|ref|YP_004281322.1| KpsF/GutQ family protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065256|gb|ADY73263.1| KpsF/GutQ family protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 300

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/295 (44%), Positives = 187/295 (63%), Gaps = 4/295 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  A++ +   KGRVV+TGIGKSG I  K+A+TL+STGTP+FF+H A+A+H
Sbjct: 3   NLAEHLDENFEKAIDILYKTKGRVVLTGIGKSGLICKKIAATLSSTGTPAFFLHPADAAH 62

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI  DD +I +S SG + EL  I+   + F IP+IAIT+  +S +A  +D+ L L 
Sbjct: 63  GDLGMIKGDDTVIAISNSGETAELLNIIPIIKSFGIPIIAITNNPESSLAKLSDVTLLLH 122

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
            + E+CP GLAPTTS    LA+GDA+++AL++ + F   DF   HPGGKLG       D+
Sbjct: 123 VKKEACPLGLAPTTSTTTTLALGDAISVALMKLKKFKSEDFARFHPGGKLGIRLAKVKDI 182

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M  GDS+P+V     L + I  +S K+ G   V   G +L GIIT+GD+ R F K  D N
Sbjct: 183 MRKGDSVPIVSPETSLKEIIYEISSKKLGATLVAKNG-RLIGIITDGDLRRAFEKQIDFN 241

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + E +M KNPK I  +     A++L+ ++ I+VL VV + +K +GI+H  D+L
Sbjct: 242 MKACE-LMTKNPKTISGEVFAEKAIELMEKYKITVLPVVKNDKKIVGIIHMHDIL 295


>gi|127514234|ref|YP_001095431.1| KpsF/GutQ family protein [Shewanella loihica PV-4]
 gi|126639529|gb|ABO25172.1| KpsF/GutQ family protein [Shewanella loihica PV-4]
          Length = 325

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 204/316 (64%), Gaps = 5/316 (1%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +I  +R  ++L++  Q   S +F  A + I A  G+V++ G+GKSGHIG+K+++TLAS
Sbjct: 12  RKVIDTER--NALDNLYQYVDSSEFAKACQLILACTGKVIVMGMGKSGHIGNKISATLAS 69

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGDLG+++ +D+++ +S SG + E+  ++   +R  +P+IA+T + 
Sbjct: 70  TGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGEASEILTLMPVIKRMGLPVIAVTGKP 129

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A H+ + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+++DF + H
Sbjct: 130 ESNMAKHSVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTKDDFALSH 189

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +  SDVMH GD +PLV     + +A+  +S+K  G   VV+    L GI 
Sbjct: 190 PGGSLGRKLLLKVSDVMHKGDDLPLVAEDICITEALYEISKKGLGMTGVVNSQGMLVGIF 249

Query: 268 TEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R    ++N    S+ +VM      + E  L   A++++ +  I+ L+V D+ QK
Sbjct: 250 TDGDLRRVIDAEINLRKTSISEVMTHGCVTVSEGILAAQALKVMDEKEINGLIVTDEQQK 309

Query: 326 AIGIVHFLDLLRFGII 341
            IG ++ LD+++ G+I
Sbjct: 310 PIGALNMLDMVKAGVI 325


>gi|290953311|ref|ZP_06557932.1| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313463|ref|ZP_06804062.1| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 323

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  K RV+ITG+GKSGHIG
Sbjct: 3   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KSRVIITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +   I
Sbjct: 60  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 120 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S+ DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 180 SKKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 238

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 239 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 299 LAVVDNGHNILGIVTMHDLIKL 320


>gi|319940536|ref|ZP_08014879.1| sugar phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
 gi|319805902|gb|EFW02660.1| sugar phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
          Length = 326

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 132/306 (43%), Positives = 185/306 (60%), Gaps = 8/306 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L  +E+    +L   F  AV  I   KG V+ +G+GKSGHIG KLA+T +STGT S
Sbjct: 21  ERQALEKVEN----DLGAPFVAAVRLILQTKGNVIFSGVGKSGHIGRKLAATFSSTGTTS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH+ EA+HGDLGMI   D+ + +S+SG S EL   +   +   IP+IA+T + +S +A
Sbjct: 77  FFVHSDEAAHGDLGMIRPGDVFVGISFSGESSELMTCVPALKAMGIPIIAMTGKPRSSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L    + E+CP  LAPT S  + +A+GDA+A AL+ +++FS  DF   HP G L
Sbjct: 137 RVADVALVTAIDREACPLNLAPTASTTVTMALGDAIAGALIIAKSFSAEDFARSHPAGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SDVM   ++IP V +  P +DA+ +L++K  GC  V D G KL GI TEGD 
Sbjct: 197 GRRLLMKVSDVMRGPENIPTVGLDDPAMDALDVLAKKHLGCFVVTDHG-KLAGIFTEGDF 255

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R      DL +L   D+M   PK +  D     AM L+R+  I+ L+VVDD    +G+V
Sbjct: 256 IRALKNDTDLKSLKARDLMNPTPKSVQADESAFYAMSLIRKFQINQLVVVDDRNAVVGLV 315

Query: 331 HFLDLL 336
           H  DL+
Sbjct: 316 HIHDLV 321


>gi|167625605|ref|YP_001675899.1| KpsF/GutQ family protein [Shewanella halifaxensis HAW-EB4]
 gi|167355627|gb|ABZ78240.1| KpsF/GutQ family protein [Shewanella halifaxensis HAW-EB4]
          Length = 325

 Score =  234 bits (598), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/324 (38%), Positives = 205/324 (63%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NQLRQWGTKVIDIEKQALDNLYQYID---SSEFAQACQLILQCTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  +P
Sbjct: 62  KISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I++T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 MISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++DF + HPGG LG  L +  SDVMH G+ +P V+    + +A+  +S+K  G  AVVD 
Sbjct: 182 QDDFALSHPGGSLGRKLLLKVSDVMHKGNELPSVQDDICITEALYEISKKGLGMTAVVDC 241

Query: 260 GQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L GI T+GD+ R    ++N  T  + +VM K    I ++ L   A++++   +I+ L
Sbjct: 242 NNTLVGIFTDGDLRRVIDAEVNLRTTPIAEVMTKGCVTITDNVLAAEALKVMDTKSINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V++D Q+ +G ++ LD+++ G+I
Sbjct: 302 IVINDKQQPVGALNMLDMVKAGVI 325


>gi|323524688|ref|YP_004226841.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1001]
 gi|323381690|gb|ADX53781.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1001]
          Length = 327

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 190/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGAFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTADDVFLALSNSGETEELVAILPLIKRIGAKLIAMTGRPGSSLAKLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L    SD
Sbjct: 147 VAKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVSD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD+  ++KGI T+GD+ R   +  D 
Sbjct: 207 VMRTGDQVPKVTPEATVRDALFQLTAKRMGMTAIVDQEDRVKGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             LS+  VM  +P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RALSIAAVMTADPRTIGPDHLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|332286599|ref|YP_004418510.1| hypothetical protein PT7_3346 [Pusillimonas sp. T7-7]
 gi|330430552|gb|AEC21886.1| hypothetical protein PT7_3346 [Pusillimonas sp. T7-7]
          Length = 329

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/336 (39%), Positives = 197/336 (58%), Gaps = 12/336 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K+ +  GH  + +     A R+  +E + L +L + L       F  AV  + A +GR+V
Sbjct: 3   KTPSTAGHDALAS-----AHRTFTSEIQALQALSARLDDS----FQQAVTMLLACQGRIV 53

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TGIGKSGHI  K+A+TLASTGTP+FF+H AEA HGDLGM+T  D+++ +S+SG++ EL 
Sbjct: 54  VTGIGKSGHIARKIAATLASTGTPAFFMHGAEAIHGDLGMLTGQDIVLAISYSGTAAELI 113

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L   +R    LI+IT   +S +A  AD+ L    E E+CP  LAPT+S    L +GDA
Sbjct: 114 TVLSVVKRMGAQLISITGNPQSELALSADLHLDAHVEQEACPLNLAPTSSTTAALVLGDA 173

Query: 189 LAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           +A+A LE+R FS  DF   HPGG LG  L     DVM  G+++P+V+   P+ +A+  +S
Sbjct: 174 IAVACLEARGFSREDFARSHPGGALGRRLLTFVHDVMRQGNALPIVQADTPVAEALVEMS 233

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K  G   V+D+ +K  GI T+GD+ R    H D+  LSV   M ++PK I    L   A
Sbjct: 234 SKGMGMAIVLDDNRKPVGIFTDGDLRRLIARHGDIRPLSVSQGMSRDPKTIGPSALAVEA 293

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +    ++ ++VVD+    +G +H  DLL   +I
Sbjct: 294 ATQMDAGRLNQMLVVDESGLLLGALHMHDLLAAKVI 329


>gi|156975894|ref|YP_001446801.1| hypothetical protein VIBHAR_03660 [Vibrio harveyi ATCC BAA-1116]
 gi|156527488|gb|ABU72574.1| hypothetical protein VIBHAR_03660 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 191/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACELILSNNGKVVVMGMGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R SI +I++T + +S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLSIKIISMTGKPESNMAKLSDLHLQITVPKEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M +NP     + L    + L++  NI+ L++ D+  K +G ++  DLL+ G++
Sbjct: 272 MTQNPTTAHPEMLAVEGVNLMQDKNINALILCDN-NKIVGALNMHDLLKAGVM 323


>gi|304310281|ref|YP_003809879.1| hypothetical protein HDN1F_06350 [gamma proteobacterium HdN1]
 gi|301796014|emb|CBL44218.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 324

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 129/301 (42%), Positives = 188/301 (62%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+  +   F  A + I A KGRV++TG+GKSGHIGSK+A+TL+STGTP+FFVH  EA H
Sbjct: 24  ALRPRIDASFVRACQLILACKGRVIVTGMGKSGHIGSKIAATLSSTGTPAFFVHPGEARH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG IT +DL+I +S SG+++E+ +IL   +R    LI +T    S +A  AD+ L + 
Sbjct: 84  GDLGTITGEDLVIAISNSGNTEEVVSILPVIKRKGSLLITLTGNPHSTLATQADVNLDVS 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP GLAPT S  + L +GDALA+ALLE+R F+ NDF + HPGG LG  L +   +
Sbjct: 144 VAQEACPLGLAPTASTTVTLVMGDALAVALLEARGFTANDFALSHPGGALGRKLLLLVEN 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD IP V     +  A+  +S K  G   +VD+   L G+ T+GD+ R   +  D+
Sbjct: 204 VMQTGDRIPTVTADISISKALLEISSKGLGMTGIVDDQGILIGVYTDGDLRRTLDQGLDI 263

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   + +VM    KV     L   A+ ++ +  I+ LMVVDD ++ +G ++  DLLR G+
Sbjct: 264 HKTLLREVMSTKCKVTHPKVLAVEALAIMEKSKINGLMVVDDDRRPVGALNMHDLLRAGV 323

Query: 341 I 341
           +
Sbjct: 324 M 324


>gi|169656677|ref|YP_001428952.2| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|164551745|gb|ABU61996.2| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 327

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 202/322 (62%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV--EKIKAIKGRVVITGIGKSGHIG 79
           S +  A+ +   E   L  L++S+  + +F+  C +  E  +  K RV+ITG+GKSGHIG
Sbjct: 7   SHINNAVETFRLEIETLEKLKNSI--DENFEKACEIILENNRD-KSRVIITGMGKSGHIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +   I
Sbjct: 64  KKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHLDI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++NF
Sbjct: 124 PIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNF 183

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S+ DF   HP G LG  L +   ++M  G+ IP+VK    +  AI  +S+K  G   +V 
Sbjct: 184 SKKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNT-LVA 242

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GI T+GD+ R F  +  N+  ++ +VM KNPK I ++ +   A++ + ++ I+ 
Sbjct: 243 ENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEITS 302

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+    +GIV   DL++ 
Sbjct: 303 LAVVDNGHNILGIVTMHDLIKL 324


>gi|59710999|ref|YP_203775.1| D-arabinose 5-phosphate isomerase [Vibrio fischeri ES114]
 gi|197335082|ref|YP_002155149.1| sugar isomerase, KpsF/GutQ family [Vibrio fischeri MJ11]
 gi|59479100|gb|AAW84887.1| D-arabinose 5-phosphate isomerase [Vibrio fischeri ES114]
 gi|197316572|gb|ACH66019.1| sugar isomerase, KpsF/GutQ family [Vibrio fischeri MJ11]
          Length = 324

 Score =  234 bits (597), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 126/302 (41%), Positives = 193/302 (63%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   ++  F  A + +   K +VV+ G+GKSGHIG+K+A+TLASTGTPSFFVH  EAS
Sbjct: 23  TQLSNYINDDFTKACQLMLECKQKVVVMGMGKSGHIGNKIAATLASTGTPSFFVHPGEAS 82

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI + D++I +S SG + E+ A+L   +R  I LI +T + +S +A  AD+ L +
Sbjct: 83  HGDLGMIEKGDIVIAISNSGEASEILALLPVIKRLGITLITMTGKPESSMAKVADVNLQI 142

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP GLAPT+S    LA+GDA A+ALL++R F+ +DF + HPGG LG  L +  S
Sbjct: 143 TVPQEACPLGLAPTSSTTATLAMGDAFAVALLQARGFTADDFALSHPGGALGRKLLLLLS 202

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+GD +P+V     +  A+  +SEK  G  A+VD  QK+ GI T+GD+ R      D
Sbjct: 203 DIMHTGDELPMVTADALIKTALLEVSEKGLGMTAIVDNEQKVIGIFTDGDLRRLLDNKID 262

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++T ++ +VM  +P V   + L    + L++   I+ L++ D+  + +G ++  DLL+ G
Sbjct: 263 IHTQTIGEVMTHSPAVANPNLLAVEGLNLMQDKKINGLLLCDETHRLVGALNMHDLLKAG 322

Query: 340 II 341
           ++
Sbjct: 323 VM 324


>gi|307728398|ref|YP_003905622.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1003]
 gi|307582933|gb|ADN56331.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1003]
          Length = 344

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 189/301 (62%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 44  ALRDQLDGAFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 103

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 104 GDLGMVTADDVFLALSNSGETEELVAILPLIKRLGAKLIAMTGRPSSSLAKLADVHLNSG 163

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L    SD
Sbjct: 164 VAKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVSD 223

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD   ++KGI T+GD+ R   +  D 
Sbjct: 224 VMRTGDQVPKVMPEATVRDALFQLTAKRMGMTAIVDSEDRVKGIFTDGDLRRVLERDGDF 283

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             LS+  VM  +P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 284 RALSIAAVMTADPRTIGPDHLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 343

Query: 341 I 341
           I
Sbjct: 344 I 344


>gi|219872158|ref|YP_002476533.1| arabinose-5-phosphate isomerase [Haemophilus parasuis SH0165]
 gi|219692362|gb|ACL33585.1| arabinose-5-phosphate isomerase [Haemophilus parasuis SH0165]
          Length = 311

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/295 (42%), Positives = 189/295 (64%), Gaps = 9/295 (3%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   LS  F+ AV+ I   +GRVV+ GIGKSG +G K+ +T ASTGTPSFF+H  EA 
Sbjct: 19  SRLNQHLSEAFNQAVDMILNCEGRVVVAGIGKSGLVGKKMVATFASTGTPSFFLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S+SG +D++  ++   + F   +IA+T   +S +A HADI L +
Sbjct: 79  HGDLGMLKPIDVVILISYSGETDDVNKLIPSLKNFGNKIIAMTGNLQSTLAHHADITLDI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-AS 221
               E+CP+ LAPTTS+++ +A+GD LAIAL+++R+F   DF   HPGG LG   +C   
Sbjct: 139 SIGREACPNNLAPTTSSLVTMALGDVLAIALIKARDFKAEDFARFHPGGSLGRKLLCRVR 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
           DVM     +P++   C   D + +++E R G VA+V E ++L+GIIT+GDI R   K   
Sbjct: 199 DVMQK--KLPIICPLCSFSDCLNVMNEGRMG-VAIVMENEQLQGIITDGDIRRTLAKFGA 255

Query: 279 -DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             LN  + +++M +NPK IL+ T L  A + +++ +I  L+ V++  K  GIV F
Sbjct: 256 ESLNK-TAQEIMSRNPKTILDSTFLAHAEEYMKEKHIHSLIAVNEAGKVTGIVEF 309


>gi|157964551|ref|YP_001499375.1| KpsF [Rickettsia massiliae MTU5]
 gi|157844327|gb|ABV84828.1| KpsF [Rickettsia massiliae MTU5]
          Length = 324

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 196/312 (62%), Gaps = 4/312 (1%)

Query: 32  IAEKRGLSSLESSLQ---GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 13  IIAKRVISSEASALEKLSANIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 72

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 73  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 133 NSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 191

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV       + I I+++KR GC  V D+ Q L GIIT
Sbjct: 192 PGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAETIIIMNKKRLGCTLVTDKNQNLMGIIT 251

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + +VD+    IG
Sbjct: 252 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPIVDENNIIIG 311

Query: 329 IVHFLDLLRFGI 340
           I+H  DLL  G+
Sbjct: 312 IIHIHDLLCIGV 323


>gi|260772161|ref|ZP_05881078.1| arabinose 5-phosphate isomerase [Vibrio metschnikovii CIP 69.14]
 gi|260613028|gb|EEX38230.1| arabinose 5-phosphate isomerase [Vibrio metschnikovii CIP 69.14]
          Length = 324

 Score =  234 bits (597), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 198/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLA 83
           + A + +  E  GL  LE     +    F  A E I A K G+V + GIGKSGHIG K+A
Sbjct: 9   RVAQQVLATEIAGLQQLEQYFNAD----FTQACEMIIANKQGKVAVMGIGKSGHIGKKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R +  +I+
Sbjct: 65  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLNNRIIS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 125 MTGNPRSTMANLADIHLQITVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAED 184

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+MH G+++P V     + +A+  +S+K  G  AVV +  +
Sbjct: 185 FALSHPGGALGRKLLLKLSDIMHQGEALPKVSPNALIREALLEISQKGLGMTAVVSDDDR 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++ ++E VM +NP V     L    + L+++  I+ LM+V
Sbjct: 245 LVGIFTDGDLRRILDKRVDIHSATIEQVMTQNPTVASPHLLAVEGLNLMQEKRINGLMLV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+  K +G ++  DLL+ G++
Sbjct: 305 DN-HKLVGALNMHDLLKAGVM 324


>gi|307720119|ref|YP_003891259.1| KpsF/GutQ family protein [Sulfurimonas autotrophica DSM 16294]
 gi|306978212|gb|ADN08247.1| KpsF/GutQ family protein [Sulfurimonas autotrophica DSM 16294]
          Length = 320

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/295 (41%), Positives = 195/295 (66%), Gaps = 9/295 (3%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F  AVE I   KG++VI+G+GKSG IG+K+A+T ASTGTPSFF+H  EA HGDLGMI +
Sbjct: 28  EFDKAVEIILTCKGKLVISGVGKSGLIGAKMAATFASTGTPSFFLHPTEALHGDLGMIGK 87

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD++I +S+SG S+EL +IL + +RF IPLI +T +  S +  ++D+V+ +  E E+CP 
Sbjct: 88  DDVVIAISYSGESEELSSILPHIKRFGIPLIGMTRDKNSTLGQYSDVVIDVIVEKEACPL 147

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            +APT+S  + LA+GDALA+ L+ +R+F ++DF   HPGG LG  LFV   ++M + D +
Sbjct: 148 NIAPTSSTTLTLALGDALAVCLMRARDFKKSDFASFHPGGALGKKLFVKVKNLMKT-DDL 206

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           P++K    + DAI  +SE R G   + D+  KL G++++GD+ R   +     S++D ++
Sbjct: 207 PIIKEDAKVKDAILKISEGRVGTALIADDEDKLVGLMSDGDVRRALMR--QDFSLDDNVM 264

Query: 291 ----KNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               KNP  I ++ +L + A+ L+ +  I +L++ +  +K  G++H   L+  GI
Sbjct: 265 KYATKNPMSIDDEEMLASDALVLIEEKKIQLLVITNKEKKIEGVLHIHTLIEKGI 319


>gi|188591126|ref|YP_001795726.1| arabinose-5-phosphate isomerase [Cupriavidus taiwanensis LMG 19424]
 gi|170938020|emb|CAP63004.1| Arabinose-5-phosphate isomerase [Cupriavidus taiwanensis LMG 19424]
          Length = 338

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/302 (45%), Positives = 190/302 (62%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G L+  F  AV+ I    GRVV++GIGKSGHIG K+A+TLASTGTP+FFVH AEAS
Sbjct: 37  SALSGRLNGDFAHAVQLILQCTGRVVVSGIGKSGHIGRKVAATLASTGTPAFFVHPAEAS 96

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+TRDD++I  S SG + EL +I+   +R    LI++T    S +A  AD+ L  
Sbjct: 97  HGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGARLISVTGNPDSNLAKLADVHLDA 156

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    LA+GDALA+A+L++R F E DF   HPGG LG  L     
Sbjct: 157 AVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFGEEDFARSHPGGALGRKLLTHVR 216

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
           DVM +G+++P V+   PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D
Sbjct: 217 DVMRTGNAVPEVRESTPLAQALMEITRKGMAMTAVVDPDGRAIGVFTDGDLRRLLETPRD 276

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T+ + +VM +NP V+ +D L   A+Q++  + I+ L+VVDD  +  G +H  DL R  
Sbjct: 277 WKTVPIGEVMHRNPHVVNQDQLAVEAVQVMEANRINQLLVVDDDGRLAGALHIHDLTRAK 336

Query: 340 II 341
           +I
Sbjct: 337 VI 338


>gi|323498694|ref|ZP_08103684.1| sugar phosphate isomerase [Vibrio sinaloensis DSM 21326]
 gi|323316250|gb|EGA69271.1| sugar phosphate isomerase [Vibrio sinaloensis DSM 21326]
          Length = 321

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 124/283 (43%), Positives = 188/283 (66%), Gaps = 8/283 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G+VV+ G+GKSGHIG K+A++LASTGT SFFVH  EA+HGDLGMI + D+++ +S SG 
Sbjct: 42  QGKVVVMGMGKSGHIGKKIAASLASTGTSSFFVHPGEAAHGDLGMIEKGDIVLAISNSGE 101

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S E+ A+    +R +I +I++T + +S +A  ADI L +    E+CP GLAPT+S    L
Sbjct: 102 SSEILALFPVLKRLNISIISMTGKPQSNMAKLADIHLQITVPKEACPLGLAPTSSTTATL 161

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDALA++LL++R F+ +DF + HPGG LG  L +  SD+MHSGD +PLV     + DA
Sbjct: 162 VMGDALAVSLLQARGFTADDFALSHPGGALGRKLLLKLSDIMHSGDKLPLVSTDTVVRDA 221

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDT 300
           +  +S+K  G  AVVDE Q L G+ T+GD+ R   K  D+++  + DVM  NP V   + 
Sbjct: 222 LLEISQKGLGMTAVVDEQQNLMGVFTDGDLRRILDKRVDIHSALIGDVMTVNPTVASPNM 281

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRFGII 341
           L    + L+++ +I+ L++   CQ  K +G ++  D+L+ G++
Sbjct: 282 LAVEGLNLMQEKSINGLVL---CQQGKVVGALNMQDMLKAGVM 321


>gi|326560504|gb|EGE10886.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 7169]
 gi|326565766|gb|EGE15928.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC1]
          Length = 339

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 136/329 (41%), Positives = 208/329 (63%), Gaps = 8/329 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L      EL  +F  A + I    GRVV+TG+G
Sbjct: 16  KQNNLAPSDYIQDAIDAIRTEQRALELLID----ELDERFVNACQTILNCSGRVVVTGMG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 72  KSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 132 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 191

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L +R F+ +DF + HP G LG  L    SD+MH+ D +P+V     L + + +++  R G
Sbjct: 192 LHARGFTSHDFALSHPAGALGRRLLTRVSDIMHT-DHLPVVHHQSSLNETLLVMTSGRLG 250

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VVD+  K+ GI T+GD+ R   ++ N T+ ++ +M K PK + +    + A+ L+ +
Sbjct: 251 LAVVVDDDGKVVGIFTDGDLRRKLAENTNLTVEIQTLMTKTPKSVDQQMRASDALSLMNE 310

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + IS L+V+ D Q  IG++   D+L+ GI
Sbjct: 311 NAISQLLVLKDRQ-LIGVISIHDILKAGI 338


>gi|71280547|ref|YP_271186.1| KpsF/GutQ family protein [Colwellia psychrerythraea 34H]
 gi|71146287|gb|AAZ26760.1| KpsF/GutQ family protein [Colwellia psychrerythraea 34H]
          Length = 321

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/299 (41%), Positives = 185/299 (61%), Gaps = 13/299 (4%)

Query: 48  ELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
           EL+ Q  FHC        KGRV++ G+GKSGHIG K+A+TLASTGTPSFFVH  EASHGD
Sbjct: 31  ELACQLMFHC--------KGRVIVIGMGKSGHIGGKIAATLASTGTPSFFVHPGEASHGD 82

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           LGM+T +D+++ +S SG + E+ AI+   +R    LI++T   +S +A  AD  + +   
Sbjct: 83  LGMVTSNDVVLTISNSGETSEVLAIIPVIKRIGAKLISMTGNTESTLAKLADTHVCIKVS 142

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVM 224
            E+CP GL PT+S    L +GDALA+ALL +R+F+  DF + HPGG LG  L +  SD+M
Sbjct: 143 AEACPLGLTPTSSTTATLVMGDALAVALLNARDFTAEDFALSHPGGSLGKRLLLRLSDIM 202

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNT 282
           H  D +P++     + DA+  +S K  G  A+V+E Q+L G+ T+GD+ R      D+++
Sbjct: 203 HKDDRVPMISENALIKDALVEMSLKGLGMTAIVNEQQQLVGLFTDGDLRRVLDNRIDIHS 262

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            S+  VM  NP V   D L   A++++    I+ L++VD     +G ++  D L  G++
Sbjct: 263 ESINTVMTHNPSVAQSDMLAAQALKIMEDKKINGLIIVDSNNIPVGAMNMHDFLSSGVL 321


>gi|253991148|ref|YP_003042504.1| D-arabinose 5-phosphate isomerase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782598|emb|CAQ85762.1| arabinose 5-phosphate isomerase) [Photorhabdus asymbiotica]
          Length = 322

 Score =  234 bits (596), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 196/324 (60%), Gaps = 16/324 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELS----FQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           Q   R +  E+ GL+ LE  +  + +      F+C        +G+V++ G+GKSGHIG 
Sbjct: 8   QAGKRVLHIERDGLAELEQYINEDFTRTCELMFNC--------EGKVIVMGMGKSGHIGC 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ +++   +R  IP
Sbjct: 60  KIAATFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILSLIPALKRQKIP 119

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI +T+ + S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+
Sbjct: 120 LICMTNNHNSSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFT 179

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF + HPGG LG  L +  SD+M++GD IP +     L +A+  ++ K+ G   + DE
Sbjct: 180 AEDFALSHPGGALGRKLLLLVSDLMNTGDDIPRINRDSSLREALVEITRKKLGMTVICDE 239

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + GI T+GD+ R F    DL  + + DVM      I  + L   A+ L++  +I+ +
Sbjct: 240 NMHIDGIFTDGDLRRVFDMGIDLYNVKISDVMTAGGIRIKPNALAVDALNLMQSRHITSV 299

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V +   K +G++H  DLL+ G++
Sbjct: 300 LVTEG-NKLLGVLHMHDLLQAGVV 322


>gi|148244323|ref|YP_001219017.1| polysialic acid capsule expression protein [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326150|dbj|BAF61293.1| polysialic acid capsule expression protein [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 326

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 200/326 (61%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A   I+ E + ++ L  SL       F  A + I+   G+VV+ G+GKSGHI
Sbjct: 6   MSNSLLQSAKNVILTEAKAVTMLADSLDQ----NFIDACQLIQNCTGKVVLIGMGKSGHI 61

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            SK+A+TLASTGTP+F VH  EA HGDLGMIT++D++I +S+SG SDE+  ++   +   
Sbjct: 62  ASKIAATLASTGTPAFAVHPGEAGHGDLGMITQEDVVITISYSGESDEIMTLIPIIKHLG 121

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +I +T    S ++  +D+ L +  E E+CPH LAPT+S  + L +GDALAI+LL ++ 
Sbjct: 122 VFIIGMTGNVNSSISKISDVHLDVNVEKEACPHNLAPTSSTTVALVMGDALAISLLTNKG 181

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG  L    S +M +G+ IP+V     L++A+ ++S+K  G V + 
Sbjct: 182 FSVDDFARSHPSGALGRRLLTFVSTIMKTGNDIPMVSADIKLLNALLVMSQKTLGMVLIT 241

Query: 258 DEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    LKGI T+GD+ R    H ++ TL++ +VM  N + I  D     A+Q++ + N++
Sbjct: 242 DN-NTLKGIFTDGDLRRVLETHPNIQTLTIGEVMTHNCQSISADKPAIAAVQMMDKFNLN 300

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD  + +G ++   L++  II
Sbjct: 301 SLPVVDDNNQILGAINTHTLMQAKII 326


>gi|319896886|ref|YP_004135081.1| phosphosugar isomerase [Haemophilus influenzae F3031]
 gi|317432390|emb|CBY80745.1| probable phosphosugar isomerase [Haemophilus influenzae F3031]
          Length = 311

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 192/314 (61%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A  S+  E   L  L   L GE    F+  V+ I A KGR+VI GIGKSG IG K+ 
Sbjct: 4   LKIAQDSLSVESNALLQLSQRL-GE---DFNQVVDLILACKGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   D
Sbjct: 120 VTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPED 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V E ++
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPNTNFTDCLTVMNEGRMG-VALVMENEQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 237 LKGIITDGDIRRALTVNGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|78067585|ref|YP_370354.1| KpsF/GutQ family sugar isomerase [Burkholderia sp. 383]
 gi|77968330|gb|ABB09710.1| Sugar isomerase, KpsF/GutQ family [Burkholderia sp. 383]
          Length = 327

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGGFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPMNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVVD   K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGDDVPSVGLDATLSDALFQITAKRLGMTAVVDADGKVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + DVM + P+ +  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPITDVMTRGPRTVAPDHLAVEAVELMERHRINQMLVVDADGVLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|153834568|ref|ZP_01987235.1| arabinose 5-phosphate isomerase [Vibrio harveyi HY01]
 gi|148869011|gb|EDL68056.1| arabinose 5-phosphate isomerase [Vibrio harveyi HY01]
          Length = 323

 Score =  233 bits (595), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 191/293 (65%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACELILSNNGKVVVMGMGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R +I +I++T + +S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLNIKIISMTGKPESNMAKLSDLHLQITVPKEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M +NP     + L    + L++  NI+ L++ D+  K +G ++  DLL+ G++
Sbjct: 272 MTQNPTTAHPEMLAVEGLNLMQDKNINALILCDN-NKIVGALNMHDLLKAGVM 323


>gi|315125508|ref|YP_004067511.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
 gi|315014021|gb|ADT67359.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
          Length = 323

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 124/321 (38%), Positives = 200/321 (62%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q  LR +  E++ LS +   +    +  F+ A + +    GR+++ G+GKSGHIG+K+A
Sbjct: 7   IQQGLRVLEIERQALSDITQYV----NESFNQACQLMFDCSGRIIVIGMGKSGHIGNKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P+FFVH  EASHGDLGMIT +D++I++S SG + E+  I+   +R    +IA
Sbjct: 63  ATLASTGSPAFFVHPGEASHGDLGMITANDVVILISNSGETSEVLNIIPVLKRIGAKMIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A++ + +  E E+C  GLAPT S    LA+GDA+A+ALLE+R F+ +D
Sbjct: 123 MTGNQGSTMATLANVHVCIKVEQEACSLGLAPTASTTATLAMGDAMAVALLEARGFTADD 182

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   DVMHSG   P++     + DA+  +S K  G  A+VD  Q+
Sbjct: 183 FALSHPGGSLGKRLLLTLKDVMHSGADTPIINETQTIKDALIEMSAKGLGMTAIVDSDQQ 242

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D+++  +  VM K+     ++ L   A+ ++ Q  I+ L+V+
Sbjct: 243 LSGLFTDGDLRRILEQRIDIHSTEINVVMTKSCTTATQEMLAAEALNIMEQKRINGLIVI 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  + IG ++  DLL+ G++
Sbjct: 303 NEHNQPIGALNMQDLLKAGVL 323


>gi|197287456|ref|YP_002153328.1| D-arabinose 5-phosphate isomerase [Proteus mirabilis HI4320]
 gi|194684943|emb|CAR47130.1| arabinose 5-phosphate isomerase [Proteus mirabilis HI4320]
          Length = 328

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 192/321 (59%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L   +  + S     A EKI   +GRV++ G+GKSGHIG K+A+
Sbjct: 12  QAGKKVLQIEQEGLAELAQYINDDFSL----ACEKIFHCQGRVIVMGMGKSGHIGHKIAA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A++   +R  I LI +
Sbjct: 68  TFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILALIPVLKRKQILLICM 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +   ADI L +    E+CP GLAPTTS    L +GDALAIALL +R F+  DF
Sbjct: 128 TRSPQSTMGKAADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLRARGFTAEDF 187

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SD+M+  D IP V     L +A+  ++ K+ G   + D+   +
Sbjct: 188 ALSHPGGALGRKLLLHVSDLMNKEDDIPRVNKEATLREALVEITRKKLGMTVICDDNMLI 247

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    DLN   + DVM K    I  D+L   A+ L++  +I+ L+V +
Sbjct: 248 NGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRISPDSLAVEALNLMQAKHITSLLVTE 307

Query: 322 -DCQKAIGIVHFLDLLRFGII 341
            D    +G++H  DLL+ G++
Sbjct: 308 PDSDILLGVLHMHDLLQAGVV 328


>gi|326800754|ref|YP_004318573.1| KpsF/GutQ family protein [Sphingobacterium sp. 21]
 gi|326551518|gb|ADZ79903.1| KpsF/GutQ family protein [Sphingobacterium sp. 21]
          Length = 321

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 191/302 (63%), Gaps = 6/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   ++  F   V  I  IKGRV+ITGIGKS  I  K+ +T+ STGTP+ F+HAA+A 
Sbjct: 23  SKLTKNINEDFINTVHAILDIKGRVIITGIGKSAIIAQKIVATMNSTGTPAIFMHAADAI 82

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+ ++D++I +S SG++ E+K ++   +  +  +IA+    KS +A  AD +L  
Sbjct: 83  HGDLGMLQQEDIVIAISKSGNTPEIKVLVPLLKNSNAKIIAMVGNTKSYLAEQADFILDT 142

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
               E+CP  LAPTTS   QLA+GDALAI LLE R+F+ +DF   HPGG LG  L++  +
Sbjct: 143 TVSREACPLNLAPTTSTTAQLAMGDALAICLLECRSFTNDDFAKYHPGGALGKRLYLKVT 202

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
           D+    ++ P VK   P+   +  +++ R G VAVV++ +K+ GIIT+GDI R    ++D
Sbjct: 203 DLARQ-NAKPEVKSDTPIKAVLVEITKNRLGAVAVVND-KKISGIITDGDIRRMLESNQD 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L  ED+M  NPKVI  D L   A+ ++R ++I+ L+VV + Q   GIVH  DLL  G
Sbjct: 261 IGKLKAEDIMGNNPKVIQYDELAVHALNMMRNNHITQLLVVRNNQYD-GIVHLHDLLNEG 319

Query: 340 II 341
           II
Sbjct: 320 II 321


>gi|51473687|ref|YP_067444.1| sugar isomerase [Rickettsia typhi str. Wilmington]
 gi|51459999|gb|AAU03962.1| sugar isomerase protein KpsF/GutQ family [Rickettsia typhi str.
           Wilmington]
          Length = 319

 Score =  233 bits (595), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 183/296 (61%), Gaps = 2/296 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +STG PSF++H +EASHG
Sbjct: 25  LSNNIPADFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSSTGMPSFYLHPSEASHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG ITR+DL+++LS SG + EL  I+ Y    SI + A+T    S +A  +D +L +P+
Sbjct: 85  DLGTITRNDLVMMLSNSGETKELFNIIEYCNNSSIKIAAMTMNKNSTLAKRSDFLLIIPE 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+   G APT S+++ L++GDA+   + E R F+ +DF + HPGG +G       ++M
Sbjct: 145 CQEASLIG-APTISSLIMLSLGDAVMTVIHEERGFTRDDFKIYHPGGTIGANLTKIKNIM 203

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            SGD IPLV       + I I+++KR GC  V D+ Q L GIIT+GD+ RN +  ++  +
Sbjct: 204 RSGDEIPLVYEDTSFTETIIIMNKKRLGCTLVTDKEQNLIGIITDGDLRRNINDQIHLKT 263

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +M KNP  I        A+ L++  NI+ + +VD+    IGI+H  DLLR G+
Sbjct: 264 ASSIMTKNPHHISSGIFAQEALNLMKAKNITNIPIVDN-NMIIGIIHIHDLLRMGV 318


>gi|167854514|ref|ZP_02477295.1| arabinose-5-phosphate isomerase [Haemophilus parasuis 29755]
 gi|167854269|gb|EDS25502.1| arabinose-5-phosphate isomerase [Haemophilus parasuis 29755]
          Length = 311

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 188/295 (63%), Gaps = 9/295 (3%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   LS  F+ AV+ I   +GRVV+ GIGKSG +G K+ +T ASTGTPSFF+H  EA 
Sbjct: 19  SRLNQHLSEAFNQAVDMILNCEGRVVVAGIGKSGLVGKKMVATFASTGTPSFFLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S+SG +D++  ++   + F   +IA+T   +S +A HADI L +
Sbjct: 79  HGDLGMLKPIDVVILISYSGETDDVNKLIPSLKNFGNKIIAMTGNLQSTLARHADITLDI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-AS 221
             E E+CP+ LAPTTS+++ +A+GD LAIAL+++R+F   DF   HPGG LG   +C   
Sbjct: 139 SIEREACPNNLAPTTSSLVTMALGDVLAIALIKARDFKAEDFARFHPGGSLGRKLLCRVR 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
           DVM     +P++   C   D + +++E R G VA+V E ++L GIIT+GDI R   K   
Sbjct: 199 DVMQK--KLPIICPLCSFSDCLNVMNEGRMG-VAIVMENEQLLGIITDGDIRRTLAKFGA 255

Query: 279 -DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             LN  + +++M  NPK IL+ T L  A + +++ +I  L+ V++  K  GIV F
Sbjct: 256 ESLNK-TAQEIMSCNPKTILDSTFLAHAEEYMKEKHIHSLIAVNEAGKVTGIVEF 309


>gi|28899440|ref|NP_799045.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839289|ref|ZP_01991956.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|260363391|ref|ZP_05776243.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus K5030]
 gi|260879326|ref|ZP_05891681.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AN-5034]
 gi|260895715|ref|ZP_05904211.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus Peru-466]
 gi|28807676|dbj|BAC60929.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149747190|gb|EDM58178.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|308087427|gb|EFO37122.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus Peru-466]
 gi|308093076|gb|EFO42771.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AN-5034]
 gi|308111196|gb|EFO48736.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus K5030]
          Length = 323

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 190/293 (64%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACELILSNSGKVVVMGMGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R +I +I++T + +S +A  AD+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLNIKIISMTGKPESNMAKLADLHLQITVPQEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M KNP     + L    + L++  NI+ L++  +  K +G ++  DLL+ G++
Sbjct: 272 MTKNPTTAHPEMLAVEGLNLMQNKNINALILCKE-DKIVGALNMHDLLKAGVM 323


>gi|296113130|ref|YP_003627068.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis RH4]
 gi|295920823|gb|ADG61174.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis RH4]
          Length = 325

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 136/329 (41%), Positives = 207/329 (62%), Gaps = 8/329 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L      EL  +F  A + I    GRVV+TG+G
Sbjct: 2   KQNNLAPSDYIQDAIDAIRTEQRALELLID----ELDERFVNACQTILNCSGRVVVTGMG 57

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 58  KSGHIGRKIAATFASTGTPAFFIHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 117

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 118 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 177

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L +R F+ +DF + HP G LG  L    SD+MH+ D +P+V     L + + +++  R G
Sbjct: 178 LHARGFTSHDFALSHPAGALGRRLLTRVSDIMHT-DHLPVVHHQSSLNETLLVMTSGRLG 236

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+ L+ +
Sbjct: 237 LAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDALSLMNE 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + IS L+V+ D Q  IG++   D+L+ GI
Sbjct: 297 NAISQLLVLKDRQ-LIGVISIHDILKAGI 324


>gi|229845083|ref|ZP_04465219.1| probable phosphosugar isomerase [Haemophilus influenzae 6P18H1]
 gi|229812055|gb|EEP47748.1| probable phosphosugar isomerase [Haemophilus influenzae 6P18H1]
          Length = 311

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 134/314 (42%), Positives = 192/314 (61%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A  S+  E   L  L   L GE    F+  V+ I A KGR+VI GIGKSG IG K+ 
Sbjct: 4   LKIAQDSLFVESNALLKLSHRL-GE---DFNQVVDLILACKGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   D
Sbjct: 120 VTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V E ++
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPNTNFTDCLTVMNEGRMG-VALVMENEQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 237 LKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|73540065|ref|YP_294585.1| KpsF/GutQ [Ralstonia eutropha JMP134]
 gi|72117478|gb|AAZ59741.1| KpsF/GutQ [Ralstonia eutropha JMP134]
          Length = 327

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 138/302 (45%), Positives = 189/302 (62%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L G L+  F  AV+ +    GRVV++GIGKSGHIG K+A+TLASTGTP+FFVH AEAS
Sbjct: 26  AALSGRLTPDFSHAVQLVLQCTGRVVVSGIGKSGHIGRKVAATLASTGTPAFFVHPAEAS 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+TRDD++I  S SG + EL +I+   +R    LI++T   +S +A  AD  L  
Sbjct: 86  HGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGARLISVTGNPESNLAKLADAHLDA 145

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    LA+GDALA+A+L++R F E DF   HPGG LG  L     
Sbjct: 146 GVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFGEEDFARSHPGGALGRKLLTHVR 205

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
           DVM SG+++P V+   PL  A+  ++ K     AVVD   K  G+ T+GD+ R     +D
Sbjct: 206 DVMRSGNAVPEVRENTPLAQALMEITRKGMAMTAVVDSDGKAIGVFTDGDLRRLLETPRD 265

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T+ + DVM  NP V+ ED L   A+Q++  + I+ L+VVD   + +G +H  DL R  
Sbjct: 266 WKTVPIGDVMHHNPHVVHEDQLAVEAVQVMEANRINQLLVVDHDGRLVGALHIHDLTRAK 325

Query: 340 II 341
           +I
Sbjct: 326 VI 327


>gi|260900288|ref|ZP_05908683.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ4037]
 gi|308107547|gb|EFO45087.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ4037]
 gi|328471423|gb|EGF42318.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus 10329]
          Length = 323

 Score =  233 bits (594), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 190/293 (64%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A E I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACELILSNSGKVVVMGMGKSGHIGNKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R +I +I++T + +S +A  AD+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLNIKIISMTGKPESNMAKLADLHLQITVPQEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +V
Sbjct: 212 PKVSPDALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M KNP     + L    + L++  NI+ L++  +  K +G ++  DLL+ G++
Sbjct: 272 MTKNPTTAHPEMLAVEGLNLMQNKNINALILCKE-DKIVGALNMHDLLKAGVM 323


>gi|313681267|ref|YP_004059005.1| kpsf/gutq family protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154127|gb|ADR32805.1| KpsF/GutQ family protein [Sulfuricurvum kujiense DSM 16994]
          Length = 322

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 200/326 (61%), Gaps = 9/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +  A  ++  E + L      L  E++     AVE I + KG++VITG+GKSG I
Sbjct: 1   MNNDYIAIAKNTLEIEAQALREGSERLGEEIAR----AVEIILSCKGKLVITGVGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+T ASTGTPSFF+H  EA HGDLGMI R+D ++ +S+SG S EL +IL + +RF 
Sbjct: 57  GAKIAATFASTGTPSFFLHPTEALHGDLGMIGREDAVLAISYSGESPELSSILPHIKRFD 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI +T    S +  ++D V+ +  E E+CP  +APT+S  + LA+GDALA+ L+++RN
Sbjct: 117 IPLIGMTRNAASTLGRYSDEVININVEHEACPLDIAPTSSTTLTLAMGDALAVCLMKARN 176

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F + DF   HPGG LG  LFV  SD+M + +++P+V    PL +AI ILSE R G V + 
Sbjct: 177 FQKEDFASFHPGGALGKRLFVKVSDLMRT-ENLPIVNENTPLKEAILILSEGRLGTVMLT 235

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLL-TVAMQLLRQHNI 314
           +   KL G++++GDI R    +  +L  S +    K P VI + ++L + A+ L+    I
Sbjct: 236 NNEGKLSGLLSDGDIRRALMSESFSLDASAKAYATKKPLVIDDASMLASDALVLIETKKI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +L+V D      G +H   L+  GI
Sbjct: 296 QLLVVTDRAGVIQGALHLHTLVEAGI 321


>gi|170734131|ref|YP_001766078.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
 gi|206559211|ref|YP_002229972.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
           J2315]
 gi|169817373|gb|ACA91956.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
 gi|198035249|emb|CAR51124.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
           J2315]
          Length = 327

 Score =  233 bits (594), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGGFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT    S +   AD+ L   
Sbjct: 87  GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAGSSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVVD   K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDADGKVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + +VM ++P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQMLVVDADGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|161523709|ref|YP_001578721.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
 gi|189351527|ref|YP_001947155.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
           17616]
 gi|221211209|ref|ZP_03584188.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
 gi|160341138|gb|ABX14224.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
 gi|189335549|dbj|BAG44619.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
           17616]
 gi|221168570|gb|EEE01038.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
          Length = 327

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGSFAHAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V +   L DA+  ++ KR G  AVVD  +K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDDVPYVGLDATLSDALFQITAKRMGMTAVVDTNRKVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM + P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RRLPIADVMTREPRTIGADHLAVEAVELMERHRINQMLVVDADGVLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|227358282|ref|ZP_03842623.1| arabinose 5-phosphate isomerase [Proteus mirabilis ATCC 29906]
 gi|227161618|gb|EEI46655.1| arabinose 5-phosphate isomerase [Proteus mirabilis ATCC 29906]
          Length = 324

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 192/321 (59%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L   +  + S     A EKI   +GRV++ G+GKSGHIG K+A+
Sbjct: 8   QAGKKVLQIEQEGLAELAQYINDDFSL----ACEKIFHCQGRVIVMGMGKSGHIGHKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A++   +R  I LI +
Sbjct: 64  TFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILALIPVLKRKQILLICM 123

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +   ADI L +    E+CP GLAPTTS    L +GDALAIALL +R F+  DF
Sbjct: 124 TRSPQSTMGKAADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLRARGFTAEDF 183

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SD+M+  D IP V     L +A+  ++ K+ G   + D+   +
Sbjct: 184 ALSHPGGALGRKLLLHVSDLMNKEDDIPRVSKEATLREALVEITRKKLGMTVICDDNMLI 243

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    DLN   + DVM K    I  D+L   A+ L++  +I+ L+V +
Sbjct: 244 NGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRISPDSLAVEALNLMQAKHITSLLVTE 303

Query: 322 -DCQKAIGIVHFLDLLRFGII 341
            D    +G++H  DLL+ G++
Sbjct: 304 PDSDILLGVLHMHDLLQAGVV 324


>gi|329888530|ref|ZP_08267128.1| sugar isomerase, KpsF/GutQ family protein [Brevundimonas diminuta
           ATCC 11568]
 gi|328847086|gb|EGF96648.1| sugar isomerase, KpsF/GutQ family protein [Brevundimonas diminuta
           ATCC 11568]
          Length = 376

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 126/305 (41%), Positives = 188/305 (61%), Gaps = 6/305 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +LE SL   ++     A + I +  G VV+TG+GKSGHIG K+A+TLASTGT SFFVH
Sbjct: 76  LEALERSLDSSIAR----AADIILSRPGYVVVTGMGKSGHIGGKIAATLASTGTNSFFVH 131

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            AE SHGDLGM+  D  ++ LS SG S EL+  L +  R  IP+I +T   +S +  H+ 
Sbjct: 132 PAEMSHGDLGMLRPDTTLLALSNSGESRELRDPLIFCARNDIPVIGVTQRPQSFLGRHSA 191

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           + LT+PK  E+CP+GLAPTTS +M LA+GDALA+ L++ R F+  DF + HPGG LG   
Sbjct: 192 VCLTMPKVAEACPNGLAPTTSTLMSLAMGDALAMVLMDRRGFTREDFGLHHPGGALGMSL 251

Query: 218 VCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + M    + P  V +       ++ ++E R G VAV+     L G+IT+GD+ R  
Sbjct: 252 QTVREWMGDNAAAPASVPLDADFGAVVSAITEGRKGAVAVLAADGALAGMITDGDLRRAL 311

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D++ +  ED+M ++P  +  D+ ++  + LL  + IS L VVDD ++ + I+H  +L+
Sbjct: 312 TRDVSAVRAEDIMSRSPITVDPDSRMSDVVDLLSANKISNLFVVDD-RRPVAIIHIAELM 370

Query: 337 RFGII 341
           + G +
Sbjct: 371 QAGYV 375


>gi|188532477|ref|YP_001906274.1| D-arabinose 5-phosphate isomerase [Erwinia tasmaniensis Et1/99]
 gi|188027519|emb|CAO95366.1| Putative isomerase [Erwinia tasmaniensis Et1/99]
          Length = 328

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 127/311 (40%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +  F   C +  I   +G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 23  EREGLEQLDRYINDD--FTQTCNL--IYRCRGKVVVMGMGKSGHIGKKIAATFASTGTPA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+  DD++I +S SG S E+ A++   +R  + LI ++S   S + 
Sbjct: 79  FFVHPAEASHGDLGMVAPDDVVIAISNSGESSEILALIPVLKRRHVTLICLSSRPDSSMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 139 RAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH G+ +P V     L DA+  +++K  G   + D+  +++GI T+GD+
Sbjct: 199 GRKLLLRVDDIMHCGNDMPHVGRDASLRDALLEITQKNMGMTVICDDSMRIEGIFTDGDL 258

Query: 273 FRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F   +N    S+E VM      +   TL   A+ L++  NI+ +MV ++  + +G++
Sbjct: 259 RRVFDMGINIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAEN-DRLLGVI 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|262166552|ref|ZP_06034289.1| arabinose 5-phosphate isomerase [Vibrio mimicus VM223]
 gi|262026268|gb|EEY44936.1| arabinose 5-phosphate isomerase [Vibrio mimicus VM223]
          Length = 324

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/317 (42%), Positives = 198/317 (62%), Gaps = 10/317 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+ IA    L  LE  +  +  F   CA   +    G+VV+ G+GKSGHIG K+A+TLA
Sbjct: 15  LRTEIA---ALQQLEQYINAD--FASACAT-ILANQTGKVVVMGMGKSGHIGKKIAATLA 68

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T  
Sbjct: 69  STGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMTGN 128

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF + 
Sbjct: 129 PNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFALS 188

Query: 208 HPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG LG  L +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   L GI
Sbjct: 189 HPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGLGMTAVVDEQDTLLGI 248

Query: 267 ITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            T+GD+ R   K  D++T ++ DVM ++P V   + L    + L++   I+ LM+VDD  
Sbjct: 249 FTDGDLRRILDKRIDIHTTAIADVMTRHPTVAHPNLLAVEGLNLMQAKRINGLMLVDD-N 307

Query: 325 KAIGIVHFLDLLRFGII 341
           K +G ++  DLL+ G++
Sbjct: 308 KLVGALNMHDLLKAGVM 324


>gi|326560121|gb|EGE10511.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 46P47B1]
 gi|326565406|gb|EGE15583.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 103P14B1]
 gi|326573394|gb|EGE23362.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 101P30B1]
 gi|326575709|gb|EGE25632.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis CO72]
 gi|326577175|gb|EGE27069.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis O35E]
          Length = 339

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 136/329 (41%), Positives = 207/329 (62%), Gaps = 8/329 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L      EL  +F  A + I    GRVV+TG+G
Sbjct: 16  KQNNLAPSDYIQDAIDAIRTEQRALELLID----ELDERFVNACQTILNCSGRVVVTGMG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 72  KSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 132 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 191

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L +R F+ +DF + HP G LG  L    SD+MH+ D +P+V     L + + +++  R G
Sbjct: 192 LHARGFTSHDFALSHPAGALGRRLLTRVSDIMHT-DHLPVVHHQSSLNETLLVMTSGRLG 250

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+ L+ +
Sbjct: 251 LAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDALSLMNE 310

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + IS L+V+ D Q  IG++   D+L+ GI
Sbjct: 311 NAISQLLVLKDRQ-LIGVISIHDILKAGI 338


>gi|238793706|ref|ZP_04637328.1| Arabinose 5-phosphate isomerase [Yersinia intermedia ATCC 29909]
 gi|238726947|gb|EEQ18479.1| Arabinose 5-phosphate isomerase [Yersinia intermedia ATCC 29909]
          Length = 340

 Score =  233 bits (593), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 132/312 (42%), Positives = 193/312 (61%), Gaps = 10/312 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A   I    G+VV+ G+GKSGHIG K+A+TLASTGTP+
Sbjct: 35  EREGLAQLDQYINDD----FANACNAIFNCHGKVVVMGMGKSGHIGCKIAATLASTGTPA 90

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R  IPLI +++   S + 
Sbjct: 91  FFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIPLICMSNNPDSSMG 150

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 151 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 210

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP +     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 211 GRKLLLRISDIMHTGAEIPHISPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 270

Query: 273 FRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGI 329
            R F    DLN   + DVM     + +  T+L V A+ L+   +I+ ++V D  Q  +G+
Sbjct: 271 RRIFDLGVDLNHAKIADVMTSG-GIRVRPTMLAVDALNLMESRHITAVLVADGDQ-LLGV 328

Query: 330 VHFLDLLRFGII 341
           VH  D+LR G++
Sbjct: 329 VHMHDMLRAGVV 340


>gi|326571102|gb|EGE21126.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC7]
          Length = 339

 Score =  233 bits (593), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 136/329 (41%), Positives = 208/329 (63%), Gaps = 8/329 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L      EL  +F  A + I    GRVV+TG+G
Sbjct: 16  KQNNLAPSDYIQDAIDAIRTEQRALELLID----ELDERFVNACQTILNCSGRVVVTGMG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 72  KSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 132 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 191

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L +R F+ +DF + HP G LG  L +  SD+MH+ D +P+V     L + + +++  R G
Sbjct: 192 LHARGFTSHDFALSHPAGALGRRLLMRVSDIMHT-DHLPVVHHQSSLNETLLVMTSGRLG 250

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+ L+ +
Sbjct: 251 LAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDALSLMNE 310

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + IS L+V+ D Q  IG++   D+L+ GI
Sbjct: 311 NAISQLLVLKDRQ-LIGVISIHDILKAGI 338


>gi|88812302|ref|ZP_01127553.1| KpsF/GutQ family protein [Nitrococcus mobilis Nb-231]
 gi|88790553|gb|EAR21669.1| KpsF/GutQ family protein [Nitrococcus mobilis Nb-231]
          Length = 324

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 126/286 (44%), Positives = 180/286 (62%), Gaps = 5/286 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F  A++ I    GRV++ G+GKSG IG K+A+TLASTGTPSFFVH  EA HGDLGMI  
Sbjct: 41  EFAQAIDLILGCSGRVIVIGVGKSGLIGKKIAATLASTGTPSFFVHPVEAFHGDLGMIAA 100

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+II++S+SG +DE+  ++ + RRF   +I++    +S +A H+DI L  P + ESCP+
Sbjct: 101 EDVIILISFSGETDEVTRLVPFLRRFGNRIISLIGRAESTLARHSDIALLTPADRESCPN 160

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPTTS  + LA+GDALA+AL++SR F    F   HPGG LG  L     DVMH+G  +
Sbjct: 161 NLAPTTSTTVTLAMGDALAVALMKSRGFKPERFAAFHPGGSLGRRLLTRVKDVMHAG-KL 219

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDV 288
           P+VK    L D +  ++  R G V V+D G +  GI+T+GD+ R    D   +S  + +V
Sbjct: 220 PVVKPDRLLRDCLWEMTRARLGLVLVLD-GSRAIGIVTDGDLRRALLADPQAMSSPIANV 278

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M + P  I E+  L  A  ++R+  I VL+VV+D     G++   D
Sbjct: 279 MSRQPVTIHEEEKLADAEMIMRERKIKVLVVVNDEGATTGLLEIFD 324


>gi|227540044|ref|ZP_03970093.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227240119|gb|EEI90134.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 321

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/328 (42%), Positives = 204/328 (62%), Gaps = 12/328 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+T     A+ +I  E + + +L +++  +    F   V +I  IKGRV++TGIGKS 
Sbjct: 1   MKNNTEIKNIAIEAIELEAQSVQNLTNNINED----FVGVVHEILNIKGRVIVTGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  K+ +TL STGTPS F+HAA+A HGDLG++   DLII LS SG++ E+K ++ + ++
Sbjct: 57  IIAQKIVATLNSTGTPSIFLHAADAIHGDLGIVQPQDLIIALSKSGNTPEIKVLVPFLKQ 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               L+AI    +S +A HAD +L    E E+CP+ LAPTTS   QLA+GDALA+ L E 
Sbjct: 117 TQNKLVAIVGNTESFLAQHADYILDTTVEREACPNNLAPTTSTTAQLAMGDALAVVLQEC 176

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R FS+ DF   HPGG LG  L++  SD +   +  P V     +   I  +++ R G  A
Sbjct: 177 REFSDRDFAKYHPGGALGKQLYLKVSD-LSDQNGKPEVSPEASVRQIIITITQFRLGATA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+D+G  L GIIT+GDI R    H+DL+ ++ +D+M K+PK+I ++ L   A+  ++ +N
Sbjct: 236 VIDQGTIL-GIITDGDIRRMLETHEDLSHITAKDIMGKSPKLIDKNELAVNALHQMKDNN 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+  +  + A GIVH  DLL+ GII
Sbjct: 295 ITQLLATEHGKYA-GIVHIQDLLKEGII 321


>gi|254247192|ref|ZP_04940513.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
 gi|124871968|gb|EAY63684.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
          Length = 413

 Score =  232 bits (592), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 113 ALRDQLDGGFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 172

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT    S +   AD+ L   
Sbjct: 173 GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAGSSLGTLADVNLNAA 232

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 233 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 292

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVVD   K+ GI T+GD+ R   +  D 
Sbjct: 293 VMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDADGKVAGIFTDGDLRRVLARDGDF 352

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + +VM ++P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 353 RTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQMLVVDADGALIGALNMHDLFSKKV 412

Query: 341 I 341
           I
Sbjct: 413 I 413


>gi|221200002|ref|ZP_03573045.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
 gi|221206843|ref|ZP_03579855.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
 gi|221173498|gb|EEE05933.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
 gi|221180241|gb|EEE12645.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
          Length = 327

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 137/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGSFAHAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTPDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V +   L DA+  ++ KR G  AVVD  +K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDDVPYVGLDATLSDALFQITAKRMGMTAVVDTNRKVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM + P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RRLPIADVMTREPRTIGADHLAVEAVELMERHRINQMLVVDADGVLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|126438533|ref|YP_001057638.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 668]
 gi|126218026|gb|ABN81532.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 668]
          Length = 327

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 191/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+
Sbjct: 21  EANAVRTLAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A
Sbjct: 77  FFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG L
Sbjct: 137 TLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM +GD +P V +   L DA+  ++ KR G  AV+D+  ++ GI T+GD+
Sbjct: 197 GRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDDANRVAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ ++VVD+    IG +
Sbjct: 257 RRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQMLVVDERGALIGAL 316

Query: 331 HFLDLLRFGII 341
           +  DL    +I
Sbjct: 317 NMHDLFSKKVI 327


>gi|167568733|ref|ZP_02361607.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis C6786]
          Length = 327

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 187/301 (62%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L  +F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALADQLDGEFVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A  +D+ L   
Sbjct: 87  GDLGMVTKDDVFVAISHSGESEELVAILPLIKRLGAKLIAMTGRPASSLATLSDVHLNAG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +G  +P V +   L DA+  ++ KR G  AVVDE  ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGGEVPTVTLDSTLSDALFQITAKRMGMTAVVDEAGRVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM +NP+ I  D L   A++L+ +H I+ ++VVD+    IG ++  DL    +
Sbjct: 267 RRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQMLVVDEQGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|107023719|ref|YP_622046.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
 gi|116690806|ref|YP_836429.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
 gi|105893908|gb|ABF77073.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
 gi|116648895|gb|ABK09536.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
          Length = 327

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 185/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALSDQLDGGFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT    S +   AD+ L   
Sbjct: 87  GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAGSSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVVD   K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDADGKVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + +VM ++P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQMLVVDADGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|89075262|ref|ZP_01161689.1| hypothetical sugar phosphate isomerase [Photobacterium sp. SKA34]
 gi|89048943|gb|EAR54511.1| hypothetical sugar phosphate isomerase [Photobacterium sp. SKA34]
          Length = 323

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 192/292 (65%), Gaps = 4/292 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F+ A + +   +G+V++ G+GKSGHIG KLA+TLASTGTP+FFVH  EASHGDLGMI  +
Sbjct: 33  FNKACQLVLDCEGKVIVMGMGKSGHIGRKLAATLASTGTPAFFVHPGEASHGDLGMIKHE 92

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG + E+ A+L   +R  IP+I++T +  S +A  A I L +  E E+CP  
Sbjct: 93  DVVIAISNSGEASEILALLPVIKRLGIPMISMTGKPTSSMAKMAIINLQITVEKEACPLN 152

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    L +GDALAI+++E+R F+ +DF + HPGG LG  L +  +DVMH+G  +P
Sbjct: 153 LAPTSSTTATLVMGDALAISVMEARGFTADDFALSHPGGALGRKLLMRIADVMHTGKMLP 212

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVM 289
           +++    + DA+  +S+K  G  A+V+  Q+L GI T+GD+ R  + H D++  ++ +VM
Sbjct: 213 IIEETASIKDALLEISQKGLGMTAIVNNKQQLSGIFTDGDLRRLLDNHVDIHNTNIGNVM 272

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             NP+ I    L    ++++    I+ L+V ++ Q  +G ++  DLL+ G++
Sbjct: 273 SCNPQTISPQLLAAEGLKIMEDRKINGLLVTENSQ-LVGALNMHDLLKAGVM 323


>gi|119505151|ref|ZP_01627227.1| polysialic acid capsule expression protein [marine gamma
           proteobacterium HTCC2080]
 gi|119459133|gb|EAW40232.1| polysialic acid capsule expression protein [marine gamma
           proteobacterium HTCC2080]
          Length = 323

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 131/315 (41%), Positives = 197/315 (62%), Gaps = 8/315 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++  E + ++ L  SL    S  F  A + I   +GRV++TG+GKSGHI  K+A+TLAS
Sbjct: 13  RTLTLEGQAVTKLAESL----SPSFAAACQLILKTQGRVIVTGMGKSGHIAHKIAATLAS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGD+GMIT+ D ++ LS SG++ E+  +L   +R  + L+++T   
Sbjct: 69  TGTPAFFVHPGEASHGDMGMITQRDTVLALSNSGTTPEILTLLPLLKRLGVKLVSLTGHA 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +AC +D+ +    + E+CP  LAPT+S    LA+GDALAIALLESR F+E DF   H
Sbjct: 129 ESALACASDVHVDAGVDTEACPLDLAPTSSTTAALAMGDALAIALLESRGFTEEDFAFSH 188

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +   D+M  G  IPLV+    L +A+  ++ K  G   V + GQ LKGI 
Sbjct: 189 PGGALGKRLLLRVEDLMIKGTDIPLVEPTATLAEALMEITAKGLGMTIVGENGQ-LKGIF 247

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R   +  D+N++++  +M  + K +    L   AM ++ ++ IS L+V D  ++
Sbjct: 248 TDGDLRRALEEQPDINSVAITALMSASVKTLPAGHLAAEAMHIMEKNRISSLVVTDAQEQ 307

Query: 326 AIGIVHFLDLLRFGI 340
             G++H + LL+ GI
Sbjct: 308 IAGVIHLMALLKAGI 322


>gi|53718177|ref|YP_107163.1| hypothetical protein BPSL0538 [Burkholderia pseudomallei K96243]
 gi|53724070|ref|YP_104589.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei ATCC 23344]
 gi|76808851|ref|YP_332183.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           pseudomallei 1710b]
 gi|121598391|ref|YP_991423.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei SAVP1]
 gi|124386329|ref|YP_001027501.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449441|ref|YP_001082467.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei NCTC 10247]
 gi|167001029|ref|ZP_02266830.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           PRL-20]
 gi|167718035|ref|ZP_02401271.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei DM98]
 gi|167737050|ref|ZP_02409824.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 14]
 gi|167814159|ref|ZP_02445839.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 91]
 gi|167892766|ref|ZP_02480168.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 7894]
 gi|167901261|ref|ZP_02488466.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167909478|ref|ZP_02496569.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 112]
 gi|167917507|ref|ZP_02504598.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei BCC215]
 gi|237810788|ref|YP_002895239.1| arabinose 5-phosphate isomerase [Burkholderia pseudomallei MSHR346]
 gi|238561322|ref|ZP_04609537.1| arabinose 5-phosphate isomerase [Burkholderia mallei GB8 horse 4]
 gi|254175015|ref|ZP_04881676.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           10399]
 gi|254181850|ref|ZP_04888447.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|254196848|ref|ZP_04903272.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|254201677|ref|ZP_04908041.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei FMH]
 gi|254207009|ref|ZP_04913360.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei JHU]
 gi|254259097|ref|ZP_04950151.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
 gi|254357488|ref|ZP_04973762.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           2002721280]
 gi|52208591|emb|CAH34527.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52427493|gb|AAU48086.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           23344]
 gi|76578304|gb|ABA47779.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           1710b]
 gi|121227201|gb|ABM49719.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           SAVP1]
 gi|124294349|gb|ABN03618.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei NCTC
           10229]
 gi|126242311|gb|ABO05404.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei NCTC
           10247]
 gi|147747571|gb|EDK54647.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei FMH]
 gi|147752551|gb|EDK59617.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei JHU]
 gi|148026552|gb|EDK84637.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           2002721280]
 gi|160696060|gb|EDP86030.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           10399]
 gi|169653591|gb|EDS86284.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|184212388|gb|EDU09431.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|237506396|gb|ACQ98714.1| arabinose 5-phosphate isomerase [Burkholderia pseudomallei MSHR346]
 gi|238524774|gb|EEP88205.1| arabinose 5-phosphate isomerase [Burkholderia mallei GB8 horse 4]
 gi|243063100|gb|EES45286.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           PRL-20]
 gi|254217786|gb|EET07170.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
          Length = 327

 Score =  232 bits (592), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 191/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+
Sbjct: 21  EANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A
Sbjct: 77  FFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG L
Sbjct: 137 TLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM +GD +P V +   L DA+  ++ KR G  AV+D+  ++ GI T+GD+
Sbjct: 197 GRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDDANRVAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ ++VVD+    IG +
Sbjct: 257 RRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQMLVVDERGALIGAL 316

Query: 331 HFLDLLRFGII 341
           +  DL    +I
Sbjct: 317 NMHDLFSKKVI 327


>gi|312881879|ref|ZP_07741646.1| arabinose 5-phosphate isomerase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370458|gb|EFP97943.1| arabinose 5-phosphate isomerase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 321

 Score =  232 bits (591), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 120/280 (42%), Positives = 187/280 (66%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+T ASTGTP+FFVH  EA+HGDLGM++ +D++I +S SG S
Sbjct: 43  GKVVVMGMGKSGHIGKKIAATFASTGTPAFFVHPGEAAHGDLGMVSPEDIVITISNSGES 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+  +    +R  + +I+IT + +S +A  +D  L +    E+CP GLAPT+S    L 
Sbjct: 103 SEILGLFPVLKRLKVKMISITGKAQSTMAKLSDYHLLIDASEEACPLGLAPTSSTTATLV 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R F+  DF + HPGG LG  L +  +D+MH+GD++PLV     + DA+
Sbjct: 163 MGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRLTDIMHTGDALPLVPANTLIKDAL 222

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +S+K  G VAVV E + L GI T+GD+ R   K  D+++ ++ +VM   P     + L
Sbjct: 223 IEISQKGLGMVAVVCENESLVGIFTDGDLRRILDKRIDIHSTAIGEVMTVKPTTANANML 282

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              A+ L+++++IS L++ +D +K IG ++  DLL+ G++
Sbjct: 283 AAEALNLMQENSISGLIICED-KKVIGALNMHDLLKAGVL 321


>gi|262401813|ref|ZP_06078378.1| arabinose 5-phosphate isomerase [Vibrio sp. RC586]
 gi|262351785|gb|EEZ00916.1| arabinose 5-phosphate isomerase [Vibrio sp. RC586]
          Length = 324

 Score =  232 bits (591), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 136/330 (41%), Positives = 202/330 (61%), Gaps = 12/330 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGK 74
           HS    +  +  LR+ IA    L  LE  +  +    F  A   I A + G+VV+ G+GK
Sbjct: 3   HSFDYQNVAKQVLRTEIA---ALQQLEQYINAD----FASACSTILANQTGKVVVMGMGK 55

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   
Sbjct: 56  SGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVL 115

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +R +I +I++T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+
Sbjct: 116 KRLNIRVISMTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALM 175

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++R F+  DF + HPGG LG  L +  +D+MHSG+++P V     + DA+  +S+K  G 
Sbjct: 176 QARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGEALPKVAPQALIRDALLEISQKGLGM 235

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            A+VDE   L GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L++ 
Sbjct: 236 TAIVDEQDTLLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPAVAQPNLLAVEGLNLMQA 295

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             I+ LM+V++  K +G ++  DLL+ G++
Sbjct: 296 KRINGLMLVEN-NKLVGALNMHDLLKAGVM 324


>gi|126452770|ref|YP_001064884.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 1106a]
 gi|167822682|ref|ZP_02454153.1| sugar isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 9]
 gi|167844256|ref|ZP_02469764.1| sugar isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei B7210]
 gi|217420160|ref|ZP_03451666.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|226199527|ref|ZP_03795084.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314658|ref|ZP_04813674.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
 gi|254187783|ref|ZP_04894295.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254296099|ref|ZP_04963556.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|126226412|gb|ABN89952.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106a]
 gi|157806023|gb|EDO83193.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|157935463|gb|EDO91133.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217397464|gb|EEC37480.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|225928408|gb|EEH24438.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|242137897|gb|EES24299.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
          Length = 327

 Score =  232 bits (591), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 191/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+
Sbjct: 21  EANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A
Sbjct: 77  FFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG L
Sbjct: 137 MLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM +GD +P V +   L DA+  ++ KR G  AV+D+  ++ GI T+GD+
Sbjct: 197 GRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDDANRVAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ ++VVD+    IG +
Sbjct: 257 RRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQMLVVDERGALIGAL 316

Query: 331 HFLDLLRFGII 341
           +  DL    +I
Sbjct: 317 NMHDLFSKKVI 327


>gi|152993936|ref|YP_001359657.1| arabinose-5-phosphate isomerase [Sulfurovum sp. NBC37-1]
 gi|151425797|dbj|BAF73300.1| arabinose-5-phosphate isomerase [Sulfurovum sp. NBC37-1]
          Length = 322

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 126/323 (39%), Positives = 195/323 (60%), Gaps = 13/323 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  +   E   L ++   L       F  A+E I + KG++++TG+GKSG +G+K+A
Sbjct: 4   IQIAQETFQTEAEALLTMTERLDQ----NFLDAIETIFSTKGKLIVTGVGKSGLVGAKMA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT SFF+H  EA HGDLGMI +DD ++ +S SG S+EL  IL + +RF I LI 
Sbjct: 60  ATFASTGTSSFFLHPTEALHGDLGMIGKDDTLLAISSSGESEELTKILPHIKRFEIQLIG 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A +AD+ + +  E E+CP  +APTTS  + +A+GDALA+AL+  R F + D
Sbjct: 120 LTGNADSTLARYADVWIDISVEKEACPLNVAPTTSTTLTMALGDALAVALMHKRGFRKED 179

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  LFV   D+M + +++P++K   PL +A+  +SE + G V VVDE   
Sbjct: 180 FASFHPGGSLGKRLFVKIKDLMRT-ENLPVIKENTPLKEAVVAMSEGKLGTVLVVDENDA 238

Query: 263 LKGIITEGDIFRNFHKDLNTLSVE----DVMIKNPKVILEDTLL-TVAMQLLRQHNISVL 317
              ++++GD+ R   ++    S+E    D   ++PK      LL + A++++    I +L
Sbjct: 239 FTALLSDGDLRRALMRE--DFSMEQPAIDYATQHPKSYSNTELLASEALEIIENERIQLL 296

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            + D+  K IG++H  DL+  GI
Sbjct: 297 PITDEAGKIIGVLHIHDLVNAGI 319


>gi|325284947|ref|YP_004260737.1| KpsF/GutQ family protein [Cellulophaga lytica DSM 7489]
 gi|324320401|gb|ADY27866.1| KpsF/GutQ family protein [Cellulophaga lytica DSM 7489]
          Length = 321

 Score =  232 bits (591), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 136/328 (41%), Positives = 201/328 (61%), Gaps = 12/328 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M NS   +  A R+I  E   + +L S+L   L   F  AV  I   KGR++I+GIGKS 
Sbjct: 1   MSNSKTIIDIAKRTISNEADAIKNL-SNL---LDTNFTDAVNTIYNSKGRLIISGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  K+ +TL STGTPS F+HAA+A HGDLG + +DD++I +S SG++ E+K ++   +R
Sbjct: 57  IIAQKIVATLNSTGTPSIFMHAADAIHGDLGTVLKDDVVICISKSGNTPEIKVLVPLIKR 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LI +T    S +A  ++ VL    E E+CP+ LAPTTS   QL IGDA+A++LLE 
Sbjct: 117 GGNVLIGMTGNTDSFLAQQSNYVLNTYVEKEACPNNLAPTTSTTAQLVIGDAIAVSLLEL 176

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           + F+  DF   HPGG LG  L++  +D++++    P VK   P+ + I  +SEK  G  A
Sbjct: 177 KRFTSKDFAKYHPGGALGKKLYLRVNDIVNNNQK-PEVKTNTPVKEVIVEISEKMLGATA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+ E  K+ GIIT+GDI R  N + ++  L+ +D+M KNPK +  D L   A++L++Q  
Sbjct: 236 VL-ENDKVIGIITDGDIRRMLNTYDNIGNLTAKDIMSKNPKTVNTDVLAVDALELMQQQE 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           IS L+ V D  K +G++H  +L+  GI+
Sbjct: 295 ISQLVAVKDS-KYVGLLHLHNLVNEGIL 321


>gi|167585440|ref|ZP_02377828.1| KpsF/GutQ family protein [Burkholderia ubonensis Bu]
          Length = 327

 Score =  231 bits (590), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 184/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AV  +    GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALSDQLDGDFVKAVALLLGCGGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGQLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD IP V +   L DA+  ++ KR G  AVVD G K+ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDEIPSVGLDATLSDALFQITAKRLGMTAVVDAGGKVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM + P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RRLPIADVMTRQPRTIGPDHLAVEAVELMERHRINQMLVVDADGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|326564163|gb|EGE14399.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 12P80B1]
 gi|326570417|gb|EGE20457.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC8]
          Length = 339

 Score =  231 bits (590), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 136/329 (41%), Positives = 207/329 (62%), Gaps = 8/329 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L      EL  +F  A + I    GRVV+TG+G
Sbjct: 16  KQNNLAPSDYIQDAIDAIRTEQRALELLID----ELDERFVNACQTILNCSGRVVVTGMG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 72  KSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 132 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 191

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L +R F+ +DF + HP G LG  L    SD+MH+ D +P+V     L + + +++  R G
Sbjct: 192 LHARGFTSHDFALSHPAGALGRRLLTRVSDIMHT-DHLPVVHHQSSLNETLLVMTSGRLG 250

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+ L+ +
Sbjct: 251 LAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMHASDALSLMNE 310

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + IS L+V+ D Q  IG++   D+L+ GI
Sbjct: 311 NAISQLLVLKDRQ-LIGVISIHDILKAGI 338


>gi|113866420|ref|YP_724909.1| sugar phosphate isomerase involved in capsule formation [Ralstonia
           eutropha H16]
 gi|113525196|emb|CAJ91541.1| predicted sugar phosphate isomerase involved in capsule formation
           [Ralstonia eutropha H16]
          Length = 333

 Score =  231 bits (590), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 138/302 (45%), Positives = 188/302 (62%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G L+  F  AV  I    GRVV++GIGKSGHIG K+A+TLASTGTP+FFVH AEAS
Sbjct: 32  SALSGRLNGDFARAVLLILQCTGRVVVSGIGKSGHIGRKVAATLASTGTPAFFVHPAEAS 91

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+TRDD++I  S SG + EL +I+   +R    LI++T    S +A  AD+ L  
Sbjct: 92  HGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGARLISVTGNPDSNLAKLADVHLDA 151

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    LA+GDALA+A+L++R F E DF   HPGG LG  L     
Sbjct: 152 AVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFGEEDFARSHPGGALGRKLLTHVR 211

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
           DVM +G+++P V+   PL  A+  ++ K     AVVD      G+ T+GD+ R     +D
Sbjct: 212 DVMRTGNAVPEVRENTPLAQALMEITRKGMAMTAVVDPDGHAIGVFTDGDLRRLLETPRD 271

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T+ + DVM +NP V+ E+ L   A+Q++  + I+ L+VVDD  +  G +H  DL R  
Sbjct: 272 WKTVPIGDVMHRNPHVVNENQLAVEAVQVMEANRINQLLVVDDDGRLTGALHIHDLTRAK 331

Query: 340 II 341
           +I
Sbjct: 332 VI 333


>gi|121606990|ref|YP_984319.1| KpsF/GutQ family protein [Polaromonas naphthalenivorans CJ2]
 gi|120595959|gb|ABM39398.1| KpsF/GutQ family protein [Polaromonas naphthalenivorans CJ2]
          Length = 330

 Score =  231 bits (590), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 133/300 (44%), Positives = 183/300 (61%), Gaps = 3/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   +  +F  AV  + A  GRVV+ G+GKSGHIG K+A+TLASTGTP+ FVH AEASHG
Sbjct: 31  LASRIGDEFVQAVGLMFACPGRVVVMGMGKSGHIGRKIAATLASTGTPAMFVHPAEASHG 90

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   D+++ +S SG S+EL AIL    R  + LIA+T   +S +A  A + L    
Sbjct: 91  DLGMIQAVDVVLAISNSGESEELVAILPVLIRLGVALIAMTGGAQSTLAKQAHVTLDTSV 150

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP  LAPT+S   QLA+GDAL++ALL++R F E DF   HPGG LG  L    SDV
Sbjct: 151 AREACPLNLAPTSSTTAQLAMGDALSVALLDARGFREEDFARSHPGGALGRKLLTHVSDV 210

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M SG+++P V       + +  +S K  G  AVVD  Q + GI T+GD+ R   K  DL 
Sbjct: 211 MRSGNAVPQVMPETSFTELMREMSAKGLGASAVVDGKQCVLGIFTDGDLRRLVEKGVDLR 270

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +L+  DVM   P  +  ++L   A+ L+ Q+ I+ ++VVD+     G ++  DL+R  +I
Sbjct: 271 SLTAADVMHARPHTVRINSLAVEAVALMEQYQINSVLVVDEAGALCGALNTNDLMRAKVI 330


>gi|258625810|ref|ZP_05720689.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM603]
 gi|258582048|gb|EEW06918.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM603]
          Length = 326

 Score =  231 bits (590), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 137/332 (41%), Positives = 202/332 (60%), Gaps = 10/332 (3%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           R  +S    +  +  LR+ IA    L  LE  +  +  F   CA   +    G+VV+ G+
Sbjct: 2   RMPNSFDYQNVAKQVLRTEIA---ALQQLEQYINAD--FASACAT-ILANQTGKVVVMGM 55

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L 
Sbjct: 56  GKSGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLP 115

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
             +R +I +I++T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+A
Sbjct: 116 VLKRLNIRVISMTGNPSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVA 175

Query: 193 LLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L+++R F+  DF + HPGG LG  L +  +D+MHSG+++P V     + DA+  +S+K  
Sbjct: 176 LMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGL 235

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           G  AVVDE   L GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L+
Sbjct: 236 GMTAVVDEQDTLLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGLNLM 295

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +   I+ LM+VD+  K +G ++  DLL+ G++
Sbjct: 296 QAKRINGLMLVDN-NKLVGALNMHDLLKAGVM 326


>gi|300771775|ref|ZP_07081646.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761161|gb|EFK57986.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 321

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/328 (41%), Positives = 203/328 (61%), Gaps = 12/328 (3%)

Query: 19  MKNSTV--QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+T     A+ +I  E + + +L +++  +    F   V +I  +KGRV++TGIGKS 
Sbjct: 1   MKNNTQIKNIAIEAIALEAQSVQNLTNNINDD----FVGVVHEILNLKGRVIVTGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  K+ +TL STGTPS F+HAA+A HGDLG++   DLII LS SG++ E+K ++ + ++
Sbjct: 57  IIAQKIVATLNSTGTPSIFLHAADAIHGDLGIVQPQDLIIALSKSGNTPEIKVLVPFLKQ 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               L+AI     S +A HAD +L    E E+CP+ LAPTTS   QLA+GDALA+ L E 
Sbjct: 117 TQNKLVAIVGNTGSFLAQHADYILDTTVEREACPNNLAPTTSTTAQLAMGDALAVVLQEC 176

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R FS+ DF   HPGG LG  L++  SD +   +  P V     +   I  +++ R G  A
Sbjct: 177 REFSDRDFAKYHPGGALGKQLYLKVSD-LSDQNGKPEVSPEASVRQIIITITQFRLGATA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+D+G  L GIIT+GDI R    H DL+ ++ +D+M K+PK+I ++ L   A+  ++ +N
Sbjct: 236 VIDQGTIL-GIITDGDIRRMLETHDDLSHITAKDIMGKSPKLIDKNELAVNALHQMKDNN 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+  ++ + A GI+H  DLL+ GII
Sbjct: 295 ITQLLATENGKYA-GIIHIQDLLKEGII 321


>gi|223042048|ref|ZP_03612225.1| arabinose-5-phosphate isomerase [Actinobacillus minor 202]
 gi|223017165|gb|EEF15600.1| arabinose-5-phosphate isomerase [Actinobacillus minor 202]
          Length = 311

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 184/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L  +F+ AVE I   +GRVV+ GIGKSG +G K+ +TLASTGTPSFF+H  EA HG
Sbjct: 21  LNQRLDEEFNQAVEMILNCEGRVVVAGIGKSGLVGKKMVATLASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D++I++S SG +D++  ++   + F   +IA+T    S +  HADIVL +  
Sbjct: 81  DLGMLKAIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNPHSTLGKHADIVLNINV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E+CP+ LAPTTS ++ +A+GDALAIAL+ +RNF   DF   HPGG LG   +C   DV
Sbjct: 141 EREACPNNLAPTTSTLVTMALGDALAIALINARNFRAEDFARFHPGGSLGRKLLCRVRDV 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----D 279
           M+    +P+        + +++++E R G VAV+ +G +L+GIIT+GDI R   K     
Sbjct: 201 MNP--KVPITSPSTSFSECLSVMNEGRMG-VAVIMQGDQLEGIITDGDIRRALAKFGAES 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + E +M +NPK I + T L  A + ++  +I  L+ +DD  K  G++ F
Sbjct: 258 LNK-TAEQIMTRNPKTIKDSTFLAKAEEQMKALHIHSLIALDDHGKVSGLIEF 309


>gi|68250279|ref|YP_249391.1| arabinose-5-phosphate isomerase [Haemophilus influenzae 86-028NP]
 gi|68058478|gb|AAX88731.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           86-028NP]
          Length = 337

 Score =  231 bits (590), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/318 (41%), Positives = 194/318 (61%), Gaps = 13/318 (4%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K + ++ A  S+  E   L  L   L GE    F+  ++ I A +GR+VI GIGKSG IG
Sbjct: 26  KMNYLKIAQDSLSVESNALLQLSQRL-GE---DFNQVIDLILACEGRLVIGGIGKSGLIG 81

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F  
Sbjct: 82  KKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGN 141

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF
Sbjct: 142 KIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNF 201

Query: 200 SENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V 
Sbjct: 202 QPADFAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPNTNFTDCLTVMNEGRMG-VALVM 258

Query: 259 EGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           E ++LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I
Sbjct: 259 ENEQLKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKI 317

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L+VV+D    +G+V F
Sbjct: 318 HSLVVVNDENHVVGLVEF 335


>gi|238918528|ref|YP_002932042.1| D-arabinose 5-phosphate isomerase [Edwardsiella ictaluri 93-146]
 gi|238868096|gb|ACR67807.1| arabinose 5-phosphate isomerase [Edwardsiella ictaluri 93-146]
          Length = 328

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/311 (40%), Positives = 192/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A + +   +G+VV+ G+GKSGHIG K+A+TLASTGT +
Sbjct: 23  EREGLAHLDLFINQD----FSRACDAMLRCRGKVVVMGMGKSGHIGRKIAATLASTGTSA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+ + D+++ +S SG S E++A++   +R ++ LI +T+   S + 
Sbjct: 79  FFVHPGEASHGDLGMVEQRDVVLAISNSGESQEIQALIPVLKRQNVTLICMTNNPDSAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADIHLCIRVPQEACPMGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD +P+V     L DA+  ++ K  G   +      + GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHSGDEVPMVSPTASLRDALLEITRKNLGLTVICGPDAHIDGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    +LN   + DVM +    I    L   A+ L+++ +I+ L+V ++  + IG+V
Sbjct: 259 RRIFDMGINLNNAKIADVMTRGGIRIRPTALAVDALNLMQERHITSLLVAEN-DRLIGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|269137860|ref|YP_003294560.1| D-arabinose 5-phosphate isomerase [Edwardsiella tarda EIB202]
 gi|267983520|gb|ACY83349.1| D-arabinose 5-phosphate isomerase [Edwardsiella tarda EIB202]
 gi|304557913|gb|ADM40577.1| Arabinose 5-phosphate isomerase [Edwardsiella tarda FL6-60]
          Length = 328

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 188/311 (60%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E +    G+VV+ G+GKSGHIG K+A+TLASTGT +
Sbjct: 23  EREGLAQLDHFINQD----FSRACEAMLRCSGKVVVMGMGKSGHIGRKIAATLASTGTSA 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+   D+++ +S SG S E++A++   +R S+ LI +T+   S + 
Sbjct: 79  FFVHPGEASHGDLGMVEPRDVVLAISNSGESQEIQALIPVLKRQSVTLICMTNNPDSAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADIHLCIRVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD +P V     L DA+  ++ K  G   +      + GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHSGDEVPTVSPTASLRDALLEITRKNLGLTVICGPDAHIDGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM +    I    L   A+ L++  +I+ L+V ++  + IG+V
Sbjct: 259 RRIFDMGIDLNNAKIADVMTRGGIRIRPTALAVDALNLMQDRHITSLLVAEN-DRLIGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|308051143|ref|YP_003914709.1| KpsF/GutQ family protein [Ferrimonas balearica DSM 9799]
 gi|307633333|gb|ADN77635.1| KpsF/GutQ family protein [Ferrimonas balearica DSM 9799]
          Length = 324

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 200/320 (62%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   R I  EK  +  L   +       F  A   I A +G+VV+ G+GKSGHIG+K+A+
Sbjct: 9   QWGRRVIEVEKAAIDGLNRFIDD----AFVAACHTILACQGKVVVMGMGKSGHIGNKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF+H  EASHGDLGM++R+D++I +S SG + E+  ++   RR  +P+IA+
Sbjct: 65  TLASTGTPAFFMHPGEASHGDLGMLSREDVVIAISNSGEAGEIMTLMPVIRRLGVPVIAM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  A   L +  + E+CP GLAPT+S    L +GDALA+ LL+++ F+ +DF
Sbjct: 125 TGKPESSLAKVAQHHLCIAVDEEACPLGLAPTSSTTATLVMGDALAVVLLQAKGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MH+G+ +PLV     + +A+  +S K  G  AVVD+  ++
Sbjct: 185 ALSHPGGALGRKLLLRVTDLMHAGELLPLVTEQVTVSEALLEISAKGLGMTAVVDDQGRM 244

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R  +   D++   +  VM +NP  I    L   A++L+ +  I+ L+VVD
Sbjct: 245 SGLFTDGDLRRVLDARVDIHATPIGSVMTRNPVTISGPMLAAEALKLMEERKINGLVVVD 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  +  G ++ +D+L+ G++
Sbjct: 305 EEGRPQGALNTMDMLKAGVL 324


>gi|167627692|ref|YP_001678192.1| arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597693|gb|ABZ87691.1| Arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 320

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 7/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  +   E + L  L++S+  +  F+  C +  +   +GRV+ITG+GKSG IG K+A
Sbjct: 4   IQNAKLTFELEIQALEKLKNSIGDD--FKKACDI-ILNNKQGRVIITGMGKSGQIGKKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH  EA HGD GMIT  D+++ +S SG+S E+  I+   +   IP+I+
Sbjct: 61  ATLASTGTPAFFVHPGEAGHGDFGMITDKDVVVAISNSGNSSEIMGIMPMIKHLGIPVIS 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   S++A ++D+ L L  + E+CP  LAPT+S    L +GDALAIALL+++NFS  D
Sbjct: 121 ITSNKNSLMAKNSDVTLNLGVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFSARD 180

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HP G LG  L +   ++M  G+ IP VK    L  AI  +S+K  G   VV E  K
Sbjct: 181 FAFSHPSGALGRKLILKVENIMRKGNEIPKVKSTDNLRKAILEISDKGIGSTLVV-EDNK 239

Query: 263 LKGIITEGDIFRNFHKD-LNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R F  +  N+  ++ +VM KNPK +  D +   A++ + +  I+ L VV
Sbjct: 240 LLGIFTDGDLRRMFEAESFNSQKTISEVMSKNPKTVSSDEMAISALEEMERFEITSLAVV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D      GI+   DL++ G+
Sbjct: 300 DGKNNVEGIITMHDLVKLGL 319


>gi|294634661|ref|ZP_06713194.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
 gi|291091907|gb|EFE24468.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
          Length = 328

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K+A+TLASTGT S
Sbjct: 23  EREGLAQLDHFINQD----FVQACEAMLRCRGKVVVMGMGKSGHIGRKIAATLASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM+   D+++ +S SG S E++A++   +R ++ LI +T+  +S + 
Sbjct: 79  FFVHPGEASHGDLGMVEARDVVLAISNSGESQEIQALIPVLKRQNVTLICMTNNPESAMG 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADIHLCIRVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFAMSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MHSGD +P V     L DA+  ++ K  G   +      ++GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHSGDEVPTVNPAASLRDALLEITRKNLGLTVICGPDAHIEGIFTDGDL 258

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    +LN   + DVM +    I    L   A+ L++  +I+ L+V ++ Q  +G+V
Sbjct: 259 RRIFDMGINLNDAKIADVMTRGGIRIRPTALAVEALNLMQDRHITSLLVAENDQ-LLGVV 317

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 318 HMHDMLRAGVV 328


>gi|154148842|ref|YP_001407261.1| carbohydrate isomerase KpsF/GutQ family protein [Campylobacter
           hominis ATCC BAA-381]
 gi|153804851|gb|ABS51858.1| carbohydrate isomerase, KpsF/GutQ family [Campylobacter hominis
           ATCC BAA-381]
          Length = 319

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 193/296 (65%), Gaps = 12/296 (4%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   AV+ I   KG++V+TG+GKSGHIG+K+A+T+ASTGTPSFFVH  EA HGDLGMI++
Sbjct: 29  EIEKAVKLILECKGKLVVTGVGKSGHIGAKIAATMASTGTPSFFVHPTEALHGDLGMISK 88

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL++ +S+SG S+EL  IL + +RF + +IA+     S +A  AD+ ++L    E+CP 
Sbjct: 89  NDLVLAISYSGESEELIRILPHLKRFGVKIIAMAKSPNSSLAKMADVFISLDIVREACPL 148

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
           G APT S  + LA+GDALA+ L+  RNF + DF   HPGG LG  LF+  SDVM + D +
Sbjct: 149 GAAPTVSTTLTLALGDALAVCLMHERNFKKEDFANFHPGGSLGKRLFLKVSDVMRT-DDL 207

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSV 285
           P+V     L  AI  ++  + G V +VD+  +L  I+++GD+ R     NF  D+N  +V
Sbjct: 208 PIVSDDVSLKIAINTMTHGKLGNVLLVDKNGELVAILSDGDLRRALMDENF--DINNKAV 265

Query: 286 EDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +   KNPKVI    +L + A++++  + I +L+VV +  K IG +H  DL++ GI
Sbjct: 266 -NFASKNPKVIDNPEMLASRALEIIENYKIQMLIVVRN-NKPIGTLHIHDLMKIGI 319


>gi|238796188|ref|ZP_04639698.1| Arabinose 5-phosphate isomerase [Yersinia mollaretii ATCC 43969]
 gi|238719881|gb|EEQ11687.1| Arabinose 5-phosphate isomerase [Yersinia mollaretii ATCC 43969]
          Length = 319

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 190/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTP+
Sbjct: 14  EREGLAQLDQYINDD----FSSACEAIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPA 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F VH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +++  +S + 
Sbjct: 70  FSVHPAEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIKLICMSNNPESTMG 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 130 KAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDFALSHPGGAL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 190 GRKLLLRISDIMHTGAEIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 249

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D  ++ +G+V
Sbjct: 250 RRVFDMGIDLNHAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVADG-EQLLGVV 308

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 309 HMHDMLRAGVV 319


>gi|241668267|ref|ZP_04755845.1| arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876800|ref|ZP_05249510.1| phosphosugar isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842821|gb|EET21235.1| phosphosugar isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 320

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/320 (41%), Positives = 195/320 (60%), Gaps = 7/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  +   E + L  L++S+  +  F+  C +  +   +GRV+ITG+GKSG IG K+A
Sbjct: 4   IQNAKLTFELEIQALEKLKNSIGDD--FKKACDI-ILNNKQGRVIITGMGKSGQIGKKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH  EA HGD GMIT  D+++ +S SG+S E+  I+   +   IP+I+
Sbjct: 61  ATLASTGTPAFFVHPGEAGHGDFGMITDKDVVVAISNSGNSSEIMGIMPMIKHLGIPVIS 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   S++A ++D+ L L  + E+CP  LAPT+S    L +GDALAIALL+++NFS  D
Sbjct: 121 ITSNKNSLMAKNSDVTLNLGVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFSARD 180

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HP G LG  L +   ++M  G+ IP VK    L  AI  +S+K  G   VV E  K
Sbjct: 181 FAFSHPSGALGRKLILKVENIMRKGNEIPKVKSTDNLRKAILEISDKGIGSTLVV-EDNK 239

Query: 263 LKGIITEGDIFRNFHKD-LNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R F  +  N+  ++ +VM KNPK +  D +   A++ + +  I+ L VV
Sbjct: 240 LLGIFTDGDLRRMFEAESFNSQKTISEVMSKNPKTVSSDEMAISALEEMERFEITSLAVV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D      GI+   DL++ G+
Sbjct: 300 DGKNNVEGIITMHDLVKLGL 319


>gi|187479584|ref|YP_787609.1| arabinose 5-phosphate isomerase [Bordetella avium 197N]
 gi|115424171|emb|CAJ50724.1| arabinose 5-phosphate isomerase [Bordetella avium 197N]
          Length = 328

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/318 (40%), Positives = 192/318 (60%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R++  E + ++ L + L G     F  AV+ + A +GRVV++G+GK+GHI  K+A+TL
Sbjct: 15  ARRTLQTEAQAITELSARLDG----SFTRAVDMLLACQGRVVVSGLGKTGHIARKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FF+HAAEA+HGDLGM+T  D+++ LS+SGS  EL  IL  A+R  + +IA+T 
Sbjct: 71  ASTGTPAFFMHAAEAAHGDLGMLTSQDVLMALSYSGSGQELLTILPVAKRLGVGIIALTG 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  AD+ L      E+CP  LAPT S  + LA+GDALA+A LE+R F  +DF  
Sbjct: 131 NPASDLALQADVHLDASVVQEACPLNLAPTASTTVSLALGDALAVACLEARGFGPDDFAR 190

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     D+M  G+++P V     L  A+  +S K  G  AVVD   +  G
Sbjct: 191 SHPGGALGRRLLTHVRDIMRHGEALPTVASTDSLSRALEEMSAKGMGMTAVVDAQLRPVG 250

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +  D+  L+V + M  NP+ +    L   A +++ +  +S ++V++D 
Sbjct: 251 IFTDGDLRRLIERLGDVRGLTVAEGMTHNPRSVEPGALAVEAARIMDEKRLSQMLVINDD 310

Query: 324 QKAIGIVHFLDLLRFGII 341
              IG +H  DL+   ++
Sbjct: 311 GVLIGALHMHDLMAAKVV 328


>gi|218710672|ref|YP_002418293.1| arabinose 5-phosphate isomerase [Vibrio splendidus LGP32]
 gi|218323691|emb|CAV20025.1| Arabinose 5-phosphate isomerase [Vibrio splendidus LGP32]
          Length = 323

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 130/311 (41%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TLASTGT +
Sbjct: 18  EVAGLTQLDQYFNDD----FSKACDLILNNKGKVVVMGMGKSGHIGNKIAATLASTGTSA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T +  S +A
Sbjct: 74  FFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTGKPASNMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 134 TLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFALSHPGGAL 193

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH+GDS+P+V     + DA+  +S+K  G  A+V E  ++KGI T+GD+
Sbjct: 194 GRQLLLKLDDIMHTGDSLPIVAPDALVRDALLEISQKGLGMTAIVGEDGQMKGIFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K  D+++  + DVM  NP V   + L    + L++  +I+ LM+  D  K +G +
Sbjct: 254 RRILDKRIDIHSTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLC-DSGKLVGAL 312

Query: 331 HFLDLLRFGII 341
           +  DLL+ G++
Sbjct: 313 NMHDLLKAGVM 323


>gi|134279895|ref|ZP_01766607.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           305]
 gi|134249095|gb|EBA49177.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           305]
          Length = 327

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 191/311 (61%), Gaps = 7/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+
Sbjct: 21  EANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    LIA+T    S +A
Sbjct: 77  FFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAKLIAMTGRPASSLA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG L
Sbjct: 137 MLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     DVM +GD +P V +   L DA+  ++ KR G  AV+D+  ++ GI T+GD+
Sbjct: 197 GRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDDANRVAGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ ++VVD+    IG +
Sbjct: 257 RRVLGRDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQMLVVDERGALIGAL 316

Query: 331 HFLDLLRFGII 341
           +  DL    +I
Sbjct: 317 NMHDLFSKKVI 327


>gi|291612912|ref|YP_003523069.1| KpsF/GutQ family protein [Sideroxydans lithotrophicus ES-1]
 gi|291583024|gb|ADE10682.1| KpsF/GutQ family protein [Sideroxydans lithotrophicus ES-1]
          Length = 353

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/301 (46%), Positives = 192/301 (63%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   +   F  A+  I A KGRV+++G+GKSGHI  K+A+T++STGTP++FVH  EASH
Sbjct: 53  ALTQRIDDNFLHALNLILACKGRVIVSGMGKSGHIARKIAATMSSTGTPAYFVHPGEASH 112

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T  D++I LS+SG S+EL  I+   +R    LI++T   +S +A  AD+ L   
Sbjct: 113 GDLGMVTAQDVVIALSYSGESEELLTIVPAIKRQGAHLISLTGNPRSSLALAADVHLDGS 172

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP GLAPT S    LA+GDALA+ALL+++ F E DF   HPGG LG  L     D
Sbjct: 173 VAQEACPMGLAPTASTTAALALGDALAVALLDAKGFGEEDFARSHPGGSLGRRLLTRVRD 232

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +MHS  SIP V+ G  L DA+  +S K  G  A+VD+ ++L GI T+GD+ R   K  D 
Sbjct: 233 IMHSNASIPSVREGATLADAVLEISRKGLGMTAIVDDHKRLLGIYTDGDLRRTLEKKLDF 292

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +T  V  VM KNP+ I  D L   A+QL+ ++NIS L VVD  +K +G ++  DLL+  +
Sbjct: 293 STTLVSTVMSKNPRNIGPDELAVDAVQLMEKYNISQLPVVDADKKLVGALNMHDLLKAKV 352

Query: 341 I 341
           I
Sbjct: 353 I 353


>gi|145220332|ref|YP_001131041.1| KpsF/GutQ family protein [Prosthecochloris vibrioformis DSM 265]
 gi|145206496|gb|ABP37539.1| KpsF/GutQ family protein [Chlorobium phaeovibrioides DSM 265]
          Length = 322

 Score =  231 bits (589), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 204/326 (62%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           M +ST+    R+++  E   +S +   L G     F  AV  + A KG+V+I+G+GKSG 
Sbjct: 1   MDSSTIIEKGRTVLLKEAAAISRMAERLDG----NFAEAVAALGACKGKVIISGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+T++STGT + F+H AEA+HGDLGM+ ++D++I LS SG+++EL  I+   R+ 
Sbjct: 57  VGQKMAATMSSTGTTAVFLHPAEAAHGDLGMVQQNDVVIGLSKSGTTEELNFIIPPLRQI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + +IA+T   +S +  +ADI L    E E+CP+ LAPTTS    LA+GDAL+IAL+E +
Sbjct: 117 GVTIIAMTGSVRSYLGENADITLDTGIEQEACPYDLAPTTSTTAMLAMGDALSIALMEEK 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F++ DF + HP G LG  L +   ++M +G+++P+V+    + + I  ++ KR+G  AV
Sbjct: 177 SFTQRDFALSHPKGALGRRLTIKLKEIMATGEAVPIVRESDSMSEMILEMTSKRYGVSAV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L GI T+GD+ R   +  +  +L+  +VM  NPK   +D L    +  L  + I
Sbjct: 237 VDSAGRLTGIFTDGDLRRLVQQGEEFLSLTAGEVMTPNPKTADDDMLAKECLDTLETYRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + LMV ++  + +G++H  DLL  G+
Sbjct: 297 TQLMVCNNQHQPVGLIHLHDLLALGL 322


>gi|15602390|ref|NP_245462.1| KpsF [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720786|gb|AAK02609.1| KpsF [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 346

 Score =  231 bits (588), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 193/313 (61%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E++ L+ L       L   F+  VE I   +GR+VI GIGKSG +G K+ 
Sbjct: 39  LQIARETLAVEEQALARLGQ----RLDTHFNEIVELILQCQGRLVIGGIGKSGLVGKKMV 94

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 95  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 154

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A H+D VL +  E E CP+ LAPTTS ++ +A+GDALA+AL+++R+F   D
Sbjct: 155 LTGNPNSTLAKHSDYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVALIKARDFKPAD 214

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+ ++     D ++I++E R G VA+V E  +
Sbjct: 215 FARFHPGGSLGRRLLCRVKDEMQT--RLPVTRLETSFTDCLSIMNEGRMG-VALVMEQNQ 271

Query: 263 LKGIITEGDIFRNFHKD-LNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           LKGIIT+GDI R    +   TL  + +D+M  NPK I +D  L  A   +++  I  L+V
Sbjct: 272 LKGIITDGDIRRALTANGAETLRKTAQDLMTSNPKTIHQDAYLAEAEAFMKEKKIHSLVV 331

Query: 320 VDDCQKAIGIVHF 332
           ++D Q  +G+V F
Sbjct: 332 INDQQNVVGLVEF 344


>gi|262170536|ref|ZP_06038214.1| arabinose 5-phosphate isomerase [Vibrio mimicus MB-451]
 gi|261891612|gb|EEY37598.1| arabinose 5-phosphate isomerase [Vibrio mimicus MB-451]
          Length = 324

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 197/317 (62%), Gaps = 10/317 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+ IA    L  LE  +  +  F   CA   +    G+VV+ G+GKSGHIG K+A+TLA
Sbjct: 15  LRTEIA---ALQQLEQYINAD--FASACAT-ILANQTGKVVVMGMGKSGHIGKKIAATLA 68

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T  
Sbjct: 69  STGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMTGN 128

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF + 
Sbjct: 129 PSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFALS 188

Query: 208 HPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG LG  L +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   L GI
Sbjct: 189 HPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGLGMTAVVDEQDTLLGI 248

Query: 267 ITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            T+GD+ R   K  D++T ++ DVM + P V   + L    + L++   I+ LM+V+D  
Sbjct: 249 FTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGLNLMQAKRINGLMLVED-N 307

Query: 325 KAIGIVHFLDLLRFGII 341
           K +G ++  DLL+ G++
Sbjct: 308 KLVGALNMHDLLKAGVM 324


>gi|260582618|ref|ZP_05850407.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae NT127]
 gi|260094290|gb|EEW78189.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae NT127]
          Length = 337

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 192/314 (61%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A  S+  E   L  L   L GE    F+  V+ I A +GR+VI GIGKSG IG K+ 
Sbjct: 30  LKIAQDSLSVESNALLQLSQRL-GE---DFNQVVDLILACEGRLVIGGIGKSGLIGKKMV 85

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 86  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 145

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   D
Sbjct: 146 VTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPAD 205

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V E ++
Sbjct: 206 FAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQ 262

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 263 LKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 321

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 322 VVNDENHVVGLVEF 335


>gi|120603622|ref|YP_968022.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
 gi|120563851|gb|ABM29595.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
          Length = 339

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 186/292 (63%), Gaps = 2/292 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  AV+ +  I GR+ +TG+GKSGH+G K+A+TLASTG+P++F+H +EASHGDLGM
Sbjct: 49  LDTSFCDAVDCLYGISGRIAVTGMGKSGHVGRKVAATLASTGSPAYFIHPSEASHGDLGM 108

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  +D ++  S SG++ EL  I+ Y+ R  IPLI +T  + S++  H+  +L LP  PE+
Sbjct: 109 LVSNDAVLAFSNSGNTAELSDIILYSARRGIPLIGVTRNSDSLLGKHSTHLLLLPLVPEA 168

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
            P G APTTS  +Q+A+GDALA+ L+  R  S  +F+  HPGG LG   +   ++MHSG 
Sbjct: 169 DPLGCAPTTSTTLQMALGDALALTLMCHRGCSPEEFHRWHPGGSLGRKLLTVKEIMHSGA 228

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +PL+    P+ + + +++ K FG VA + E  +L GIIT+GD+ R+    L   +   V
Sbjct: 229 EVPLISSSTPMPEVLCLMTGKGFG-VAGILEKDRLVGIITDGDLRRHMGITLMDKTARQV 287

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M  +P V+ E TL   A++L++++ I+ L V    +  +GI++  D LR G+
Sbjct: 288 MHPDPVVVDEGTLAVAALRLMQKNQITSLFVTRKGEP-VGILNVHDCLRAGV 338


>gi|237748915|ref|ZP_04579395.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes OXCC13]
 gi|229380277|gb|EEO30368.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes OXCC13]
          Length = 338

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 140/328 (42%), Positives = 195/328 (59%), Gaps = 3/328 (0%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  +  ++ A  ++  E   L SL      E +  F  +V  +   KGRVV++G+GKSG
Sbjct: 11  SVDSDRMLKLADETLAIESHALESLRKRFIEEDAEHFIQSVTLLLNCKGRVVVSGMGKSG 70

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+TLASTGTP+ FVH  EA+HGDLGMIT DD+ I LS+SG ++EL +I    +R
Sbjct: 71  HIGRKIAATLASTGTPAMFVHPGEAAHGDLGMITHDDVFIALSYSGEANELMSIAPIIKR 130

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T    S +A  AD+ L +  E E+CP  LAPT S    LA+GDALA+A+L++
Sbjct: 131 MGTKLIAMTGRPDSSLAQLADVHLNVHVEKEACPLNLAPTASTTTTLALGDALAVAVLDA 190

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F E+DF   HPGG LG  L    SDVM +GD +P+VK    L DA+  +++K     A
Sbjct: 191 RGFREDDFARSHPGGALGRKLLTLVSDVMRAGDDVPVVKADTLLYDALFEITKKGIAMTA 250

Query: 256 VVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVDE     G+ T+GD+ R   K    + L + DVM KNP+ I  D L   A+ ++ +  
Sbjct: 251 VVDEAGHAIGVFTDGDLRRLIEKQQHFSNLVIRDVMSKNPRTISSDKLAAEAVSIMEKFR 310

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+V D+  K  G +H  DL    +I
Sbjct: 311 INQLLVTDNDGKLTGALHIHDLTEAKVI 338


>gi|206601617|gb|EDZ38100.1| Sugar isomerase, KpsF/GutQ family [Leptospirillum sp. Group II
           '5-way CG']
          Length = 332

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 131/330 (39%), Positives = 195/330 (59%), Gaps = 13/330 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S ++ A   +  E R LS+L  S+       F  AV  I    G+V +TG+GKSGH+  
Sbjct: 7   ESRIRKAREVLDEESRALSALSLSMD----EAFSRAVAAILQGSGKVAVTGMGKSGHVAR 62

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTP+FF+H  EA HGDLG + R D ++ LS SG + E+  +L   +R  IP
Sbjct: 63  KIAATLSSTGTPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRIDIP 122

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++  E +S +A  +++ L +P   E+ P G+APTTS    LA+GDALA+ LLE R F 
Sbjct: 123 LISMVCERESTLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEERAFD 182

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF  LHPGG LG   ++  SD+MH+G ++P+V  G  L + I  ++ K+ G  AV D 
Sbjct: 183 VGDFARLHPGGMLGRRYYLKVSDLMHTGTALPVVASGTALREVIMEMTAKKLGIAAVTDP 242

Query: 260 GQKLKGIITEGDI-----FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           G ++ GI+T+GD+      R F     T     V+ VM ++P  + +D L + A+ L+  
Sbjct: 243 GHRVLGILTDGDLRRILERRTFDSAGGTFLDDPVDGVMTRSPVSVRKDLLASEAVALMEH 302

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +S L+VVD+  +  GI+HF D LR  ++
Sbjct: 303 RKVSQLLVVDEGGQLEGILHFHDCLRAKVV 332


>gi|328794425|ref|XP_003252062.1| PREDICTED: arabinose 5-phosphate isomerase-like, partial [Apis
           mellifera]
          Length = 284

 Score =  231 bits (588), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 124/272 (45%), Positives = 177/272 (65%), Gaps = 3/272 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV  I   +GRV+ITG+GKSGHIG K+A+++ASTGTP++FVH AEA HGDLGMI   
Sbjct: 1   FAEAVTTILDCRGRVIITGMGKSGHIGRKIAASMASTGTPAYFVHPAEAGHGDLGMIVDG 60

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I LS SG S+E+ A++   +R  + LI IT +  S +A HADI L      E+CP G
Sbjct: 61  DVLIALSNSGESEEILALIPAIKRKHVQLICITGKTSSSMAKHADIHLCAHVSQEACPLG 120

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           LAPT+S    + +GDAL +ALL +R F+  DF + HP G LG  L +  +DVMH G  +P
Sbjct: 121 LAPTSSTTAVMVLGDALTVALLRARQFTPEDFALSHPAGSLGKRLLLTVADVMHGGQDMP 180

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
           LV+   PL +AI  +SEK  G + VV+   +L G+ T+GD+ R F  ++ L    + DVM
Sbjct: 181 LVQEDTPLREAIVTMSEKGLGMLLVVNTAGELCGLFTDGDLRRLFQDNQQLKEWLMADVM 240

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              PK I  D L T A++++++++++ L V+D
Sbjct: 241 GHTPKTITADRLATEALKIMQENHVNGLAVID 272


>gi|187922608|ref|YP_001894250.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
 gi|187713802|gb|ACD15026.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
          Length = 327

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDDGFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTADDVFLALSNSGETEELVAILPLIKRLGAKLIAMTGRPSSSLAQLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VSKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD   ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDQVPKVTPDATVRDALFQLTAKRMGMTAIVDHEDRVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             LS+  VM   P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RELSIASVMTAGPRTIGPDQLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|110598886|ref|ZP_01387137.1| KpsF/GutQ family protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339499|gb|EAT58023.1| KpsF/GutQ family protein [Chlorobium ferrooxidans DSM 13031]
          Length = 326

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 190/313 (60%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +I E R +  +   L      +F  AVE + +  G+++I+G+GKSG IG K+A+T+ASTG
Sbjct: 18  LIQEARAIQMMAERLDS----RFSGAVELLASCSGKIIISGMGKSGIIGQKIAATMASTG 73

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           + + F+H A+A+HGDLG+++R D +I LS SG++DEL  IL   +   + +IA+T   +S
Sbjct: 74  STALFLHPADAAHGDLGIVSRGDAVICLSKSGTTDELNFILPALKEIGVSIIAMTGNPRS 133

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A +ADI+L    E E+CP+ LAPTTS    LA+GDALAIAL++ +NF++ DF + HP 
Sbjct: 134 FLAQNADIMLDTGIEKEACPYDLAPTTSTTAMLAMGDALAIALMQRKNFTQRDFALTHPK 193

Query: 211 GKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG  L V  S VM    ++P+V     + + I  ++ KR+G  AVV+E  +L GI T+
Sbjct: 194 GSLGRRLTVKVSSVMAKESAVPVVHEKASVTELILEMTSKRYGVSAVVNEDGRLTGIFTD 253

Query: 270 GDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GD+ R        LS     VM  NPK +   TL    + +L  + I+ LMV D   + +
Sbjct: 254 GDLRRLVQNGTEFLSRTAGSVMTPNPKTVTTTTLAKECLDILETYRITQLMVCDREHRPV 313

Query: 328 GIVHFLDLLRFGI 340
           G+VH  DL+  G+
Sbjct: 314 GLVHIHDLITLGL 326


>gi|320157529|ref|YP_004189908.1| arabinose 5-phosphate isomerase [Vibrio vulnificus MO6-24/O]
 gi|319932841|gb|ADV87705.1| arabinose 5-phosphate isomerase [Vibrio vulnificus MO6-24/O]
          Length = 323

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 192/318 (60%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQYF----DEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAMAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  +D+MH+G+ +P V     + DA+  +S+K  G  A+VD+   L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTGEQLPRVSPDALVRDALLEISQKGLGMTAIVDQDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+  D 
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLCQDG 306

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 307 -KLVGALNMHDLLKAGVM 323


>gi|259907260|ref|YP_002647616.1| KpsF/GutQ family protein [Erwinia pyrifoliae Ep1/96]
 gi|224962882|emb|CAX54363.1| KpsF/GutQ family protein [Erwinia pyrifoliae Ep1/96]
 gi|283477072|emb|CAY72967.1| putative phosphosugar isomerase [Erwinia pyrifoliae DSM 12163]
          Length = 321

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 130/324 (40%), Positives = 187/324 (57%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L +     L   F  A E + A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIETELSGAINLAA----RLDDHFVQACEMMLACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD V+ +  + E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGNPASPLGTAADHVINIHTDREACPLGLAPTSSAVNTLMMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT L  C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDMMRKGEKLPRITSDVTIGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D    L G+ T+GD+ R  HK  N    +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DNAGVLAGVFTDGDLRRWLHKGGNIQAGISRVMTAGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD+  +  G ++  D+   GI
Sbjct: 297 APVVDEQGRVTGAINMHDIHDAGI 320


>gi|145634482|ref|ZP_01790192.1| KpsF [Haemophilus influenzae PittAA]
 gi|145268462|gb|EDK08456.1| KpsF [Haemophilus influenzae PittAA]
          Length = 311

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 183/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  V+ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGDDFNQVVDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLAHHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N  + 
Sbjct: 201 MQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAET 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|327485009|gb|AEA79416.1| Arabinose 5-phosphate isomerase [Vibrio cholerae LMA3894-4]
          Length = 324

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 8   QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 65  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 125 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 184

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 185 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQNT 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 245 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 305 EN-NKLVGALNMHDLLKAGVM 324


>gi|218961057|ref|YP_001740832.1| carbohydrate isomerase, KpsF/GutQ family [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729714|emb|CAO80626.1| carbohydrate isomerase, KpsF/GutQ family [Candidatus Cloacamonas
           acidaminovorans]
          Length = 322

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/284 (42%), Positives = 184/284 (64%), Gaps = 8/284 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG+VV+TG+GK+G I  K+++TLASTGT S F+HAAE  HGDLGMI   D++I +S SG+
Sbjct: 41  KGKVVLTGMGKTGIIARKISATLASTGTTSIFLHAAEGIHGDLGMIESGDVVIAVSNSGN 100

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           + EL  ++ + +   +P+IAIT E  S +A ++D+VL   +PKE E  P GL PT S  +
Sbjct: 101 TQELINLIPFLKFNYVPIIAITGEPNSQLAKNSDVVLNCHIPKELE--PLGLVPTASTTV 158

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLI 240
            LA+GDALAIALL+ +NF   D    HPGG +G  L +  SD+MHSG  +P+++    + 
Sbjct: 159 ALAVGDALAIALLKHKNFQLKDLAKFHPGGTIGKKLLLRVSDLMHSGKELPVIEEKAKMS 218

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVIL 297
           +AI  ++ K+ GC AV ++  KL G+IT+GD+ R  H   N+L   + +D M  NPK + 
Sbjct: 219 EAIMEMTSKKLGCTAVTNKDGKLTGMITDGDLRRQLHNKGNSLLSYTAKDCMTANPKTLK 278

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + L   A+ L+  + I+++ VVD+    +G++H  DL+  G+I
Sbjct: 279 PEVLAVEALNLMETYKITMIPVVDENNVPVGMLHMHDLITAGVI 322


>gi|254229453|ref|ZP_04922868.1| polysialic acid capsule expression protein KpsF [Vibrio sp. Ex25]
 gi|151938024|gb|EDN56867.1| polysialic acid capsule expression protein KpsF [Vibrio sp. Ex25]
          Length = 339

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 122/287 (42%), Positives = 185/287 (64%), Gaps = 5/287 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+  A+  I   +G V++ G+GKSGH+G K+++TLASTGTPSFF+H +EA HGDLGMIT+
Sbjct: 55  QYQKAISYIIDCQGHVIVCGMGKSGHVGKKISATLASTGTPSFFLHPSEAFHGDLGMITK 114

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S SG +DE+  ++   + F   +I+IT    S ++ ++D  L L +  ESCP+
Sbjct: 115 EDVIVLISNSGETDEVLQLIPSLKSFGNKVISITGRIDSTMSRNSDATLLLAQIQESCPN 174

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPTTS  + +A+GDALA+AL++ R F  NDF   HPGG LG  L     D M++ +++
Sbjct: 175 NLAPTTSTTLTIALGDALAVALMKMRQFMPNDFARFHPGGSLGRRLLTRVRDEMNA-ENL 233

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           PLV +   +   I  ++E R G VA+V E   LKGIIT+GD+ R   K  + N+L   DV
Sbjct: 234 PLVDVSDSMTSVIIKMNEGRRG-VAIVIENNGLKGIITDGDLRRALAKEAEFNSLKAGDV 292

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   PK   +  +L  A + +RQ +IS L+V+DD  K +G++   ++
Sbjct: 293 MTVEPKTCYDTEMLADAEEKMRQFSISSLVVLDDESKVVGLIQIFNM 339


>gi|53729231|ref|ZP_00133755.2| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307257653|ref|ZP_07539412.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863828|gb|EFM95752.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 311

 Score =  230 bits (587), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/293 (43%), Positives = 189/293 (64%), Gaps = 7/293 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   LS +F+ A+E I + +GR+V+ GIGKSG +G K+ +T ASTGTPSFF+H  EA H
Sbjct: 20  SLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D++I++S SG +D++  ++   + F   +IA+T  + S +A HADI+L + 
Sbjct: 80  GDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIG 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SD 222
            E E+CP+ LAPTTS ++ +A+GDALAIAL+++RNF   DF   HPGG LG   +C   D
Sbjct: 140 VEKEACPNNLAPTTSTLVTMALGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN 281
           VM    S+P+V       + + I++E R G VA+V E   L GIIT+GDI R    K  N
Sbjct: 200 VMIR--SLPIVSPTAIFSECLNIMNEGRIG-VALVMEHDCLLGIITDGDIRRLLADKGAN 256

Query: 282 TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +L  + + +M KNPK ILE T L  A + ++  ++  L+V+++  + +GI  F
Sbjct: 257 SLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEF 309


>gi|134296982|ref|YP_001120717.1| KpsF/GutQ family protein [Burkholderia vietnamiensis G4]
 gi|134140139|gb|ABO55882.1| KpsF/GutQ family protein [Burkholderia vietnamiensis G4]
          Length = 327

 Score =  230 bits (586), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGDFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGKLADVHLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SG  +P V +   L DA+  ++EKR G  AVVD   ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGADVPRVGLDATLSDALFQITEKRLGMTAVVDPDGRVAGIFTDGDLRRVLARDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + DVM + P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPIVDVMTRAPRTIGPDQLAVEAVELMERHRINQMLVVDTNGMLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|223038375|ref|ZP_03608669.1| sugar isomerase, KpsF/GutQ family [Campylobacter rectus RM3267]
 gi|222880232|gb|EEF15319.1| sugar isomerase, KpsF/GutQ family [Campylobacter rectus RM3267]
          Length = 319

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 198/325 (60%), Gaps = 12/325 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + T++ A   +  E   L+     L GE    F  AVE +   KG+VV+TG+GKSGH+G+
Sbjct: 2   SDTIKIAANVLKTEANELTRNAEILDGE----FEKAVEVLYKTKGKVVVTGVGKSGHVGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMI +DD ++ +S+SG S+EL  IL + +RF +P
Sbjct: 58  KIAATLASTGTPSFFMHPTEAMHGDLGMIGKDDTLLAISFSGESEELTKILPHVQRFGVP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++A+  +  S +   +D  + L    E+CP   APT+S  + LA+GDALA+ L+E R F 
Sbjct: 118 IVAMARDKFSTLGKFSDAFVKLDVSKEACPLDAAPTSSTTLTLALGDALAVCLMEKRGFK 177

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + DF   HPGG LG  LF+   DVM S + +P+V+    L  AI  ++  + G V +VD+
Sbjct: 178 KEDFANFHPGGSLGKRLFLKVKDVMRS-EKLPIVRWNASLKQAIDTMTHGKLGTVLIVDK 236

Query: 260 GQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNIS 315
              L  I+++GD+ R   +   DLN  +++   +K PK + +  +L + A+ L+ +H I 
Sbjct: 237 DGVLDAILSDGDLRRALMREDFDLNDAAIKYATLK-PKELNDKEMLAIDALALIERHKIQ 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L +V++    +G++H  DL   G+
Sbjct: 296 LLAIVENGV-PVGVLHIHDLANLGL 319


>gi|78187601|ref|YP_375644.1| KpsF/GutQ [Chlorobium luteolum DSM 273]
 gi|78167503|gb|ABB24601.1| KpsF/GutQ [Chlorobium luteolum DSM 273]
          Length = 326

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/323 (39%), Positives = 190/323 (58%), Gaps = 7/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  +   R ++ E   +  +   L G     F  AV  +   KG+++I+G+GKSG IG 
Sbjct: 8   DSLTEKGRRILLQEAEAILRMAERLDG----SFSSAVSLLAGCKGKIIISGMGKSGIIGQ 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T++STG+ + F+H AEA+HGDLG++ + D++I LS SG+++EL  I+   R+  + 
Sbjct: 64  KMAATMSSTGSTAVFLHPAEAAHGDLGIVQKHDVVIGLSKSGTTEELNFIIPPLRQIGVK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T   +S +  +ADI L      E+CP+ LAPTTS    LA+GDALAIAL+E + F+
Sbjct: 124 IIAMTGSRRSFLGENADITLDTGIGTEACPYDLAPTTSTTAMLAMGDALAIALMEEKQFT 183

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + DF + HP G LG  L V   D+M  GD++P+V     L D I  ++ KR+G  AVVD 
Sbjct: 184 QRDFALSHPKGALGRRLTVRVGDIMAKGDAVPVVHESSSLSDLILEMTSKRYGVSAVVDS 243

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +LKGI T+GD+ R   K    LS    DVM   PK    D L    + +L    I+ L
Sbjct: 244 DGRLKGIFTDGDLRRLVQKGEEFLSRTAGDVMTAGPKTAGPDMLAKECLDILETWRITQL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           MV D   + IG++H  DLL  G+
Sbjct: 304 MVCDALNRPIGLIHLHDLLTLGL 326


>gi|229527543|ref|ZP_04416935.1| arabinose 5-phosphate isomerase [Vibrio cholerae 12129(1)]
 gi|254291440|ref|ZP_04962232.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297581369|ref|ZP_06943292.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|150422630|gb|EDN14585.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229335175|gb|EEO00660.1| arabinose 5-phosphate isomerase [Vibrio cholerae 12129(1)]
 gi|297534207|gb|EFH73045.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 326

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQNT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|261211084|ref|ZP_05925373.1| arabinose 5-phosphate isomerase [Vibrio sp. RC341]
 gi|260839585|gb|EEX66196.1| arabinose 5-phosphate isomerase [Vibrio sp. RC341]
          Length = 324

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/280 (44%), Positives = 183/280 (65%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S
Sbjct: 46  GKVVVMGMGKSGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGES 105

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A+L   +R +I +I++T    S +A  ADI L +    E+CP  LAPT+S    L 
Sbjct: 106 SEILALLPVLKRLNIRVISMTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLV 165

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+AL+++R F+  DF + HPGG LG  L +  +D+MHSG+++P V     + DA+
Sbjct: 166 MGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGEALPKVAPQALIRDAL 225

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +S+K  G  AVVDE   L GI T+GD+ R   K  D++T ++ DVM + P V   + L
Sbjct: 226 LEISQKGLGMTAVVDEDDTLLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAQPNLL 285

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L++   I+ LM+V++  K +G ++  DLL+ G++
Sbjct: 286 AVEGLNLMQAKRINGLMLVEN-NKLVGALNMHDLLKAGVM 324


>gi|332305020|ref|YP_004432871.1| KpsF/GutQ family protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172349|gb|AEE21603.1| KpsF/GutQ family protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 323

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 196/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +Q ALR +  E + +  L   +       F  A E +K  KG+VV+ G+GKSGHIG
Sbjct: 3   QQEYIQSALRVLKIEGQAIEQLAQYIDS----NFIAACELMKNCKGKVVVCGMGKSGHIG 58

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+++TLASTGTP+FF+H  EA+HGDLGM+T  D+++ +S SG + EL A+L   +R  I
Sbjct: 59  HKISATLASTGTPAFFMHPGEANHGDLGMLTEQDVLLAISNSGETSELLALLPVVKRRGI 118

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+++  +S +  HAD+ L +  E E+C  GLAPT S    L +GDALA+ALL++R F
Sbjct: 119 AIIALSNNPQSSLGKHADVNLCIKVEKEACSLGLAPTASTTATLVMGDALAVALLDARGF 178

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG  L +   D+M  G+ +PLV     +  A+  +S K  G   +V 
Sbjct: 179 TPDDFALSHPGGALGRKLLLKLDDIMCQGELMPLVSTTHTISQALLEISRKGLGMAGIVG 238

Query: 259 EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  +L GI T+GD+ R  +   D++++S+E VM  N     + TL    + ++++  IS 
Sbjct: 239 EDGRLLGIFTDGDLRRVLDARVDIHSVSIESVMTANCVTASQGTLAAEVLNVMQKRKISS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L +VDD  + +G ++   LL  G+I
Sbjct: 299 LFIVDDNHQPVGAINMQTLLSAGVI 323


>gi|262392559|ref|YP_003284413.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262336153|gb|ACY49948.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
          Length = 329

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 122/287 (42%), Positives = 185/287 (64%), Gaps = 5/287 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+  A+  I   +G V++ G+GKSGH+G K+++TLASTGTPSFF+H +EA HGDLGMIT+
Sbjct: 45  QYQKAISYIIDCQGHVIVCGMGKSGHVGKKISATLASTGTPSFFLHPSEAFHGDLGMITK 104

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S SG +DE+  ++   + F   +I+IT    S ++ ++D  L L +  ESCP+
Sbjct: 105 EDVIVLISNSGETDEVLQLIPSLKSFGNKVISITGRIDSTMSRNSDATLLLAQIQESCPN 164

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPTTS  + +A+GDALA+AL++ R F  NDF   HPGG LG  L     D M++ +++
Sbjct: 165 NLAPTTSTTLTIALGDALAVALMKMRQFMPNDFARFHPGGSLGRRLLTRVRDEMNA-ENL 223

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           PLV +   +   I  ++E R G VA+V E   LKGIIT+GD+ R   K  + N+L   DV
Sbjct: 224 PLVDVSDSMTSVIIKMNEGRRG-VAIVIENNGLKGIITDGDLRRALAKEAEFNSLKAGDV 282

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   PK   +  +L  A + +RQ +IS L+V+DD  K +G++   ++
Sbjct: 283 MTVEPKTCYDTEMLADAEEKMRQFSISSLVVLDDESKVVGLIQIFNM 329


>gi|254420473|ref|ZP_05034197.1| sugar isomerase, KpsF/GutQ family [Brevundimonas sp. BAL3]
 gi|196186650|gb|EDX81626.1| sugar isomerase, KpsF/GutQ family [Brevundimonas sp. BAL3]
          Length = 330

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 124/299 (41%), Positives = 182/299 (60%), Gaps = 2/299 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+  +      AV+ I +  G V++TG+GKSGHIG K+A+TLASTGT +FFVH AE SH
Sbjct: 32  ALERSIDVSMARAVDVIMSRPGYVIVTGMGKSGHIGGKIAATLASTGTSAFFVHPAEMSH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+  D  ++ +S SG S EL+  L +  R  IP+IAIT    S +  +A + LT+P
Sbjct: 92  GDLGMLRPDVTVLAISNSGESRELRDPLIFCHRNGIPVIAITQRPASFLGRNAAVCLTMP 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  E+CP+GLAPTTS +M LA+GDALA+ L++ R FS  DF + HPGG LG       + 
Sbjct: 152 KVAEACPNGLAPTTSTLMTLALGDALAMVLMDRRAFSAMDFGLHHPGGALGMSLQSVREW 211

Query: 224 MHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           M    + P  V +     + ++ ++E R G VAV+D    L GI+T+GD+ R F +D   
Sbjct: 212 MGDNAAAPASVPLNANFSEVVSAITEGRKGAVAVLDLDGTLAGIVTDGDLRRAFQRDTTN 271

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L+  D+M  NP  +  D  ++  + LL  + I+ L VV++  +   IVH  +L++ G +
Sbjct: 272 LTAADIMGPNPITVDPDARMSDVVDLLTANKIANLFVVEE-GRPTAIVHIAELMQAGYV 329


>gi|255744500|ref|ZP_05418452.1| arabinose 5-phosphate isomerase [Vibrio cholera CIRS 101]
 gi|262154676|ref|ZP_06028802.1| arabinose 5-phosphate isomerase [Vibrio cholerae INDRE 91/1]
 gi|262191038|ref|ZP_06049247.1| arabinose 5-phosphate isomerase [Vibrio cholerae CT 5369-93]
 gi|255738025|gb|EET93418.1| arabinose 5-phosphate isomerase [Vibrio cholera CIRS 101]
 gi|262030516|gb|EEY49154.1| arabinose 5-phosphate isomerase [Vibrio cholerae INDRE 91/1]
 gi|262033101|gb|EEY51630.1| arabinose 5-phosphate isomerase [Vibrio cholerae CT 5369-93]
          Length = 324

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 8   QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 65  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 125 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 184

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 185 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 245 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 305 EN-NKLVGALNMHDLLKAGVM 324


>gi|146298046|ref|YP_001192637.1| KpsF/GutQ family protein [Flavobacterium johnsoniae UW101]
 gi|146152464|gb|ABQ03318.1| KpsF/GutQ family protein [Flavobacterium johnsoniae UW101]
          Length = 321

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/325 (41%), Positives = 193/325 (59%), Gaps = 10/325 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K + +  A ++I++E   ++ L   L       F  AV++I   KGR+++TGIGKS  I 
Sbjct: 4   KENILAIAKKTILSESEAITKLIDFLDE----NFFEAVQRIYETKGRLIVTGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T  STGTPS F+HAAEA HGDLGMI  DD+II +S SG+S E+K ++   +RF  
Sbjct: 60  QKMVATFNSTGTPSMFLHAAEAIHGDLGMIQNDDIIICISKSGNSPEIKVLVPLLKRFGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAIT    S +A  +D VL    + E+CP  LAPT S   QL +GDALA+ L+E R+F
Sbjct: 120 TLIAITGNTTSFLAKGSDFVLNTTVDTEACPINLAPTNSTTAQLVMGDALAVCLMEMRDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF V HPGG LG   +     M      P V     +   I  +SEKR G  AV+ E
Sbjct: 180 KPEDFAVYHPGGALGKKLLLRVKDMIEHSLKPTVTPDTSVKKVIFEISEKRLGVTAVI-E 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             K+ GIIT+GDI R  + D++T   L+ +D+M KNPKV+  +T+   A+ +L   +I+ 
Sbjct: 239 NDKIVGIITDGDIRRMLN-DVDTIADLTAKDIMSKNPKVVSSETMAVDALNILEDFSITQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D+ +   G++H  D+L+ GI+
Sbjct: 298 LIVADNGEYK-GVLHLHDILKEGIV 321


>gi|254251395|ref|ZP_04944713.1| KpsF/GutQ [Burkholderia dolosa AUO158]
 gi|124894004|gb|EAY67884.1| KpsF/GutQ [Burkholderia dolosa AUO158]
          Length = 352

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/301 (45%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 52  ALRDQLDGGFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 111

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 112 GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 171

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 172 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTYVRD 231

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD IP V +   L DA+  ++ KR G  AV+   +K+ GI T+GD+ R   +  D 
Sbjct: 232 VMRSGDDIPSVGLDATLSDALFQITAKRMGMTAVIGPDRKVAGIFTDGDLRRVLARDGDF 291

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + DVM + P+ I  D L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 292 RTLPIVDVMTREPRTIGPDHLAVEAVELMERHRINQMLVVDAHGVLIGALNMHDLFSKKV 351

Query: 341 I 341
           I
Sbjct: 352 I 352


>gi|148827102|ref|YP_001291855.1| arabinose-5-phosphate isomerase [Haemophilus influenzae PittGG]
 gi|148718344|gb|ABQ99471.1| KpsF [Haemophilus influenzae PittGG]
          Length = 311

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 183/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGDDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N  + 
Sbjct: 201 MQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAET 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|254225918|ref|ZP_04919520.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621544|gb|EAZ49876.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 326

 Score =  230 bits (586), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQTRGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|15642519|ref|NP_232152.1| hypothetical protein VC2523 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591414|ref|ZP_01678694.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153801137|ref|ZP_01955723.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153817991|ref|ZP_01970658.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822432|ref|ZP_01975099.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825768|ref|ZP_01978435.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227082642|ref|YP_002811193.1| Arabinose 5-phosphate isomerase [Vibrio cholerae M66-2]
 gi|229507420|ref|ZP_04396925.1| arabinose 5-phosphate isomerase [Vibrio cholerae BX 330286]
 gi|229509655|ref|ZP_04399136.1| arabinose 5-phosphate isomerase [Vibrio cholerae B33]
 gi|229516780|ref|ZP_04406226.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC9]
 gi|229521589|ref|ZP_04411007.1| arabinose 5-phosphate isomerase [Vibrio cholerae TM 11079-80]
 gi|229606927|ref|YP_002877575.1| arabinose 5-phosphate isomerase [Vibrio cholerae MJ-1236]
 gi|254851067|ref|ZP_05240417.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500648|ref|ZP_07010452.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657107|gb|AAF95665.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546730|gb|EAX56905.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124123370|gb|EAY42113.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126511426|gb|EAZ74020.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520075|gb|EAZ77298.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|149740491|gb|EDM54606.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227010530|gb|ACP06742.1| Arabinose 5-phosphate isomerase [Vibrio cholerae M66-2]
 gi|229341183|gb|EEO06187.1| arabinose 5-phosphate isomerase [Vibrio cholerae TM 11079-80]
 gi|229345843|gb|EEO10815.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC9]
 gi|229353129|gb|EEO18068.1| arabinose 5-phosphate isomerase [Vibrio cholerae B33]
 gi|229354925|gb|EEO19846.1| arabinose 5-phosphate isomerase [Vibrio cholerae BX 330286]
 gi|229369582|gb|ACQ60005.1| arabinose 5-phosphate isomerase [Vibrio cholerae MJ-1236]
 gi|254846772|gb|EET25186.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540817|gb|EFH76874.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 326

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|109896891|ref|YP_660146.1| KpsF/GutQ family protein [Pseudoalteromonas atlantica T6c]
 gi|109699172|gb|ABG39092.1| KpsF/GutQ family protein [Pseudoalteromonas atlantica T6c]
          Length = 323

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 195/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +Q ALR +  E + +  L   +       F  A E +K  KG+VV+ G+GKSGHIG
Sbjct: 3   QQEYIQSALRVLEIEGQAIKQLSQYIDD----NFIAACELMKNCKGKVVVCGMGKSGHIG 58

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+++TLASTGTP+FF+H  EA+HGDLGM+T  D+++ +S SG + EL A+L   +R  I
Sbjct: 59  HKISATLASTGTPAFFMHPGEANHGDLGMLTEQDVLLAISNSGETSELLALLPVVKRRGI 118

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+++   S +  HAD+ L +  E E+C  GLAPT S    L +GDALA+ALL++R F
Sbjct: 119 AIIAMSNNPASSLGKHADVNLCIKVEKEACSLGLAPTASTTATLVMGDALAVALLDARGF 178

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG  L +   D+M  GD +PLV     +  A+  +S K  G   +V 
Sbjct: 179 TPDDFALSHPGGALGRKLLLKLDDIMCQGDLMPLVGTTQTISQALLEISRKGLGMAGIVG 238

Query: 259 EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  +L GI T+GD+ R  +   D++T+S+E VM  N     ++TL    + ++++  IS 
Sbjct: 239 DDGRLLGIFTDGDLRRVLDARVDIHTVSIESVMTANCVTASQETLAAEVLNVMQKRKISS 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L +VDD    +G ++   LL  G+I
Sbjct: 299 LFIVDDNHLPVGAINMQTLLSAGVI 323


>gi|110636722|ref|YP_676929.1| KpsF/GutQ family sugar isomerase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279403|gb|ABG57589.1| sugar phosphate isomerase, KpsF/GutQ family [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 322

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/301 (43%), Positives = 183/301 (60%), Gaps = 5/301 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   ++  F   ++ I + KGRVVITGIGKS  IG+K+ +TL STGTP+ F+HAA+A H
Sbjct: 24  NLVNHINDDFQHIIDAILSCKGRVVITGIGKSAIIGNKIVATLNSTGTPALFMHAADAIH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI   D++I +S SG++ E+K ++   +     LI +     S +A  +D VL + 
Sbjct: 84  GDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRGTILIGMVGNVDSYLAVQSDYVLNVT 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CP+ LAPTTS    L +GDALA+ALLE RNFS  DF  LHPGG LG  L++  +D
Sbjct: 144 VEREACPNNLAPTTSTTATLVMGDALAVALLECRNFSSEDFAQLHPGGALGKQLYLRVND 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDL 280
           V ++ +  P+V     + D I  +S KR G  AVVD    L+GIIT+GD+ R  N H   
Sbjct: 204 V-YTANEKPMVAPDATVKDVILEISSKRLGAAAVVDSAGILQGIITDGDLRRMLNAHDSF 262

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L   D+M K PK I  D     AM L++  NI+ L+V+ + +   G +H  DLL+ GI
Sbjct: 263 KQLCAADIMTKAPKTIDADEFAASAMLLMQSKNITQLIVMKN-ENFAGFIHIHDLLKEGI 321

Query: 341 I 341
           +
Sbjct: 322 V 322


>gi|217969308|ref|YP_002354542.1| KpsF/GutQ family protein [Thauera sp. MZ1T]
 gi|217506635|gb|ACK53646.1| KpsF/GutQ family protein [Thauera sp. MZ1T]
          Length = 329

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 132/302 (43%), Positives = 180/302 (59%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L   +  +F  AVE I A  GRV++TG+GKSGHIG KLA+TLASTGTP++FVHAAEA+
Sbjct: 28  AALGARIGEEFERAVEIILARHGRVIVTGVGKSGHIGRKLAATLASTGTPAYFVHAAEAA 87

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMIT +D++I LS SGSS+EL  I+   +R    LIA+T +  S +A  AD  L  
Sbjct: 88  HGDLGMITPEDVVIALSNSGSSEELLTIVPLVKRQGARLIAMTGKPDSPLAREADAHLDA 147

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP  LAPT S    LA+GDAL++ALL++R F+  DF   HPGG LG  L     
Sbjct: 148 GVAEEACPLNLAPTASTTAALALGDALSVALLDARGFAAEDFARSHPGGALGRRLLTHVG 207

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           DVM    ++P V    PL  A+  ++    G  AVVD  +   GI T+GD+ R   K  D
Sbjct: 208 DVMRPAPAVPRVGSDAPLTQALLAMTAGGMGMTAVVDADEVPVGIFTDGDLRRALEKGCD 267

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + +  V +VM ++P+ I    L   A   +    IS L+V+DD  +  G +   DL+   
Sbjct: 268 VRSARVSEVMTRSPRSIAPGALAAEAAATMENMRISQLLVLDDAGRLAGALTTHDLMLAK 327

Query: 340 II 341
           +I
Sbjct: 328 VI 329


>gi|262167552|ref|ZP_06035257.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC27]
 gi|262024005|gb|EEY42701.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC27]
          Length = 324

 Score =  229 bits (585), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 8   QTVAKQVLATEIHALQQLEQYINED--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 65  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 125 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 184

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 185 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 245 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 305 EN-NKLVGALNMHDLLKAGVM 324


>gi|220932726|ref|YP_002509634.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
 gi|219994036|gb|ACL70639.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
          Length = 331

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 185/296 (62%), Gaps = 4/296 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  +  +F   V  I   KGRV+ TGIGKSG IG KLA+T +STGTP+FFVHA EA HG
Sbjct: 33  LKDSIGSEFADIVRVILESKGRVIFTGIGKSGLIGQKLAATFSSTGTPAFFVHAGEALHG 92

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T DD+II +S SG ++E+ +++   RR    LIA+T    S +A +A+  L +  
Sbjct: 93  DLGMVTGDDIIIAISNSGETEEVLSLVPSIRRIGAFLIAVTGNRSSTLARYANNHLLVNI 152

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CPHGLAPT S    LA+GDALAIAL + + F+  DF + HPGG LG  L     DV
Sbjct: 153 EEEACPHGLAPTASTTATLALGDALAIALSKLKGFTPEDFALFHPGGSLGRKLLTKVEDV 212

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           +      P+V+ G  + +A+  ++  + G  +VVDE  +L GIIT+GDI R   +  + L
Sbjct: 213 LQVRKQNPVVQSGTSVKEALFTMTASKMGSTSVVDERGRLVGIITDGDIRRLLEESTDFL 272

Query: 284 S--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V +VM K+P  I +D L   A++++    ++ L VV+D  K +G+++F DLLR
Sbjct: 273 QKPVLEVMTKDPITIEKDRLAAEALKIMEDKEVNDLPVVEDG-KPVGMLNFQDLLR 327


>gi|240947845|ref|ZP_04752285.1| arabinose-5-phosphate isomerase [Actinobacillus minor NM305]
 gi|240297807|gb|EER48243.1| arabinose-5-phosphate isomerase [Actinobacillus minor NM305]
          Length = 311

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 184/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L  +F+ AVE I   +GRVV+ GIGKSG +G K+ +TLASTGTPSFF+H  EA HG
Sbjct: 21  LNQRLDEEFNQAVEMILNCEGRVVVAGIGKSGLVGKKMVATLASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D++I++S SG +D++  ++   + F   +IA+T    S +  HADIVL +  
Sbjct: 81  DLGMLKAIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNPHSTLGKHADIVLNINV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E+CP+ LAPTTS ++ +A+GDALAIAL+ +RNF   DF   HPGG LG   +C   DV
Sbjct: 141 EREACPNNLAPTTSTLVTMALGDALAIALINARNFRAEDFARFHPGGSLGRKLLCRVRDV 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----D 279
           M+    +P+        + +++++E R G VAV+ +G +L+GIIT+GDI R   K     
Sbjct: 201 MNP--KVPVTSPSTSFSECLSVMNEGRMG-VAVIMQGDQLEGIITDGDIRRALAKFGAES 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + E +M +NPK I + T L  A + ++  +I  L+ +D+  K  G++ F
Sbjct: 258 LNK-TAEQIMTRNPKTIEDSTFLAKAEEQMKALHIHSLIALDEHGKVSGLIEF 309


>gi|153829802|ref|ZP_01982469.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148874720|gb|EDL72855.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 326

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 124/280 (44%), Positives = 182/280 (65%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S
Sbjct: 48  GKVVVMGMGKSGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A+L   +R SI +I++T    S +A  ADI L +    E+CP  LAPT+S    L 
Sbjct: 108 SEILALLPVLKRLSIRVISMTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLV 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+AL+++R F+  DF + HPGG LG  L +  +D+MHSGD++P V     + DA+
Sbjct: 168 MGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDAL 227

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +S+K  G  A+VDE   L GI T+GD+ R   K  D+++  + DVM + P V   + L
Sbjct: 228 LEISQKGLGMTAIVDEQNTLLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLL 287

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L++   I+ LM+V++  K +G ++  DLL+ G++
Sbjct: 288 AVEGLNLMQAKRINGLMLVEN-NKLVGALNMHDLLKAGVM 326


>gi|121727422|ref|ZP_01680550.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674957|ref|YP_001218020.1| hypothetical protein VC0395_A2104 [Vibrio cholerae O395]
 gi|121630194|gb|EAX62594.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316840|gb|ABQ21379.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227014413|gb|ACP10623.1| Arabinose 5-phosphate isomerase [Vibrio cholerae O395]
          Length = 326

 Score =  229 bits (585), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIHALQQLEQYINED--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|229513448|ref|ZP_04402912.1| arabinose 5-phosphate isomerase [Vibrio cholerae TMA 21]
 gi|229349325|gb|EEO14281.1| arabinose 5-phosphate isomerase [Vibrio cholerae TMA 21]
          Length = 326

 Score =  229 bits (584), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 133/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIYALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I+
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVIS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|86147575|ref|ZP_01065885.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio sp. MED222]
 gi|85834614|gb|EAQ52762.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio sp. MED222]
          Length = 323

 Score =  229 bits (584), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 194/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TLASTGT +
Sbjct: 18  EVAGLTQLDQYFNDD----FSKACDLILNNKGKVVVMGMGKSGHIGNKIAATLASTGTSA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T +  S +A
Sbjct: 74  FFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTGKPASNMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 134 TLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFALSHPGGAL 193

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH+GD++P V     + DA+  +S+K  G  A+V E  ++KGI T+GD+
Sbjct: 194 GRQLLLKLDDIMHTGDALPTVAPDALVRDALLEISQKGLGMTAIVGEDGQMKGIFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K  D++   + DVM  NP V   + L    + L++  +I+ LM+ D+  K +G +
Sbjct: 254 RRILDKRIDIHNTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLCDNG-KLVGAL 312

Query: 331 HFLDLLRFGII 341
           +  DLL+ G++
Sbjct: 313 NMHDLLKAGVM 323


>gi|238789756|ref|ZP_04633538.1| Arabinose 5-phosphate isomerase [Yersinia frederiksenii ATCC 33641]
 gi|238722115|gb|EEQ13773.1| Arabinose 5-phosphate isomerase [Yersinia frederiksenii ATCC 33641]
          Length = 351

 Score =  229 bits (584), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 186/311 (59%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+T ASTGTPS
Sbjct: 46  ELEGLAQLDQYINDD----FAKACEAIFNCHGKVVVMGMGKSGHIGCKIAATFASTGTPS 101

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI ++S   S + 
Sbjct: 102 FFVHPGEASHGDLGMITSQDIVLAISNSGESNEILALIPVLKRQKIQLICMSSNPDSTMG 161

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI + +    E+C  GLAPTTS    L +GDALA+ALL++R F++ DF + HPGG L
Sbjct: 162 KAADIHICIKVPQEACSLGLAPTTSTTATLVMGDALAVALLQARGFTQEDFALSHPGGAL 221

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +KGI T+GD+
Sbjct: 222 GRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMIKGIFTDGDL 281

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D  Q  +G+V
Sbjct: 282 RRVFDMGVDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVADGDQ-LLGVV 340

Query: 331 HFLDLLRFGII 341
           H  D+LR G++
Sbjct: 341 HMHDMLRAGVV 351


>gi|157825780|ref|YP_001493500.1| KpsF protein [Rickettsia akari str. Hartford]
 gi|157799738|gb|ABV74992.1| KpsF protein [Rickettsia akari str. Hartford]
          Length = 319

 Score =  229 bits (584), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 118/287 (41%), Positives = 181/287 (63%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F   +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSAASALEKLSKNIPEDFSRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR DL+I+LS SG + EL  ++ Y + FSI + A+T + 
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSIKIAAMTMDK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEHPEASLIG-APTISSLIMLSLGDALITVIHEQRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV       D I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDKNQNLIGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ R+ +  ++  +   VM KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNIT 294


>gi|27364144|ref|NP_759672.1| Arabinose 5-phosphate isomerase [Vibrio vulnificus CMCP6]
 gi|27360262|gb|AAO09199.1| Arabinose 5-phosphate isomerase [Vibrio vulnificus CMCP6]
          Length = 323

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 191/318 (60%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQYF----DEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAIAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  +D+MH+G+ +P V     + DA+  +S+K  G  A+VD    L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTGEQLPRVSPNALVRDALLEISQKGLGMTAIVDHDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+  D 
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLCQDG 306

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 307 -KLVGALNMHDLLKAGVM 323


>gi|118602206|ref|YP_903421.1| KpsF/GutQ family protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567145|gb|ABL01950.1| KpsF/GutQ family protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 327

 Score =  229 bits (584), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 128/326 (39%), Positives = 197/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A + I+ E + +  L   L  + SF   C  + I+   G+VV+ G+GKSGHI
Sbjct: 6   MSNSLLQSAKKVILTEAQAVMMLADGL--DQSFIDAC--QLIQNCTGKVVLIGMGKSGHI 61

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+T ASTGTP+F VH  EA HGDLGMIT++D++I +S+SG SDE+  ++   +R  
Sbjct: 62  AGKIAATFASTGTPAFAVHPGEAGHGDLGMITQEDVVIAISYSGESDEIMTLIPIIKRLG 121

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +I +T    S +   +++ L +  E E+CPH LAPT+S  + L +GD LAI+LL ++ 
Sbjct: 122 ILIIGMTKNVNSSIGRISNVHLDVSVEKEACPHNLAPTSSTTVALVMGDTLAISLLINKG 181

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG  L    S +M  GD IP+V     L+DA+ I+S+K  G V + 
Sbjct: 182 FSVDDFARSHPSGTLGRRLLTLVSTIMKIGDDIPIVSADTKLLDALLIMSQKTLGMVLIT 241

Query: 258 DEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +    LKGI T+GD+ R    + ++ +L++  VM  N + I +D     A+Q++ + N++
Sbjct: 242 NNNNILKGIFTDGDLRRVLETYPNIQSLTISKVMTPNCQSISKDRPAMAAVQMMDEFNLN 301

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD  + +G ++   L++  II
Sbjct: 302 SLPVVDDNNQVVGAINTHTLMQAKII 327


>gi|229524506|ref|ZP_04413911.1| arabinose 5-phosphate isomerase [Vibrio cholerae bv. albensis
           VL426]
 gi|229338087|gb|EEO03104.1| arabinose 5-phosphate isomerase [Vibrio cholerae bv. albensis
           VL426]
          Length = 326

 Score =  229 bits (583), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 132/321 (41%), Positives = 198/321 (61%), Gaps = 8/321 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q   + ++A E   L  LE  +  +  F   CA+  +    G+VV+ G+GKSGHIG K+A
Sbjct: 10  QTVAKQVLATEIHALQQLEQYINDD--FARACAM-ILANQTGKVVVMGMGKSGHIGKKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +++
Sbjct: 67  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVLS 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 127 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 186

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   
Sbjct: 187 FALSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDT 246

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V
Sbjct: 247 LLGIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K +G ++  DLL+ G++
Sbjct: 307 EN-NKLVGALNMHDLLKAGVM 326


>gi|126662149|ref|ZP_01733148.1| sugar phosphate isomerase, KpsF/GutQ family protein [Flavobacteria
           bacterium BAL38]
 gi|126625528|gb|EAZ96217.1| sugar phosphate isomerase, KpsF/GutQ family protein [Flavobacteria
           bacterium BAL38]
          Length = 321

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/318 (40%), Positives = 191/318 (60%), Gaps = 8/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R++++E + + +L + L  +    F  +V +I   KGR+V+TGIGKS  I  K+ +T
Sbjct: 10  TAKRTLLSESKSIENLVNYLDED----FAKSVTEIYNTKGRLVVTGIGKSALIAQKIVAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L STGTPS F+HAAEA HGDLGM+ ++D+II +S SG+S E+K +    +RF   LI +T
Sbjct: 66  LNSTGTPSMFLHAAEAVHGDLGMVQQEDIIICISKSGNSPEIKVLAPLLKRFGNTLIGMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           ++  S +   +  +L    E E+CP+ LAPT S   QL +GDALA+ L+E RNF   DF 
Sbjct: 126 ADKNSYLGKESHYILHAYVESEACPNNLAPTNSTTAQLVLGDALAVCLMEMRNFKSEDFA 185

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           + HPGG LG   +     M      P+V     +   I  +SEKR G  AV++  Q + G
Sbjct: 186 IYHPGGALGKKLLLRVKDMLDTTHKPMVPPDASIKRVIMEISEKRLGVTAVIENNQVI-G 244

Query: 266 IITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+GDI R  N       L+ +D+M KNPK I    L++ A+ +L  ++I+ L+VVD+ 
Sbjct: 245 IVTDGDIRRMLNNRDTFADLTAQDIMTKNPKNINSSILVSEALDILENNSITQLVVVDNN 304

Query: 324 QKAIGIVHFLDLLRFGII 341
           +   GI+H  D+L+ GI+
Sbjct: 305 EYK-GILHLHDILKEGIV 321


>gi|328954186|ref|YP_004371520.1| KpsF/GutQ family protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454510|gb|AEB10339.1| KpsF/GutQ family protein [Desulfobacca acetoxidans DSM 11109]
          Length = 334

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 135/332 (40%), Positives = 191/332 (57%), Gaps = 7/332 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T +   L     +Q A   +  E  G+++L      +L   F  AV+ I   KGR+++T
Sbjct: 1   MTAQKRPLSHPKILQLAREVLAIESEGIANLIP----KLDHNFVRAVQMIFQAKGRLIVT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG +  K+ +TL STG PS F+H  EA HGDLGMI+  D+++ LS SG + EL  +
Sbjct: 57  GVGKSGIVARKIVATLNSTGAPSLFLHPVEAMHGDLGMISPQDVVLALSNSGETSELTIL 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R  +PLIA+T   +S +A H+D+V+ +    E+CP GLAPT S    LA+GDALA
Sbjct: 117 LPSIKRLGVPLIALTGRVESTLASHSDVVIDVGVPREACPLGLAPTASTTAALAMGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL  R F  +DF   HPGG LG  L +   +VM +G+ +P V    PLI A+  + EK
Sbjct: 177 VALLTQRGFKASDFRRFHPGGSLGARLSLAIGEVMLTGNRVPRVHPEDPLISALREMDEK 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            FG   VVD    L GI T+GD+ R   K   L   +V  VM  +P  I  ++L + A++
Sbjct: 237 GFGATLVVDGAGVLLGIFTDGDLRRCLRKFQHLQDKTVAQVMTPSPHAIGPESLASQALE 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +    I+VL VVD  +  +GIVH  DLL  G
Sbjct: 297 HMEHKAITVLPVVDAKRVVLGIVHLHDLLGRG 328


>gi|257092272|ref|YP_003165913.1| KpsF/GutQ family protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044796|gb|ACV33984.1| KpsF/GutQ family protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 327

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/301 (43%), Positives = 180/301 (59%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   +   F  A+  +   +GRV+++G+GKSGH+G K+ASTLASTGTP+FFVH AEASH
Sbjct: 27  ALADRIDGAFLQALRLVLNCRGRVIVSGMGKSGHVGRKIASTLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMITRDD++I +S SG S EL  I+   +R    LI++T    S +A  AD+ L   
Sbjct: 87  GDLGMITRDDVLIAISNSGESAELLTIVPSIKRQGARLISMTGNRSSSLAVEADVHLDAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+ALL++R F   DF   HPGG LG  L     D
Sbjct: 147 VAQEACPLNLAPTASTTAVLALGDALAVALLDARGFGPEDFARSHPGGSLGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM  G +IP V     +  AI  +S    G  AVV   +++ G++T+GD+ R F +  D 
Sbjct: 207 VMRVGAAIPEVDPATSVPAAILEISRGGIGMTAVVTAERRVIGVVTDGDLRRAFGREADP 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L V D+M + P+ I  D L   A++++ QH I+ L VVD     +G ++  DL +  +
Sbjct: 267 RHLFVTDIMGRQPRSIGPDRLAVEAVEMMEQHKINQLPVVDATGVLVGALNMHDLFKAKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|86131800|ref|ZP_01050397.1| sugar isomerase [Dokdonia donghaensis MED134]
 gi|85817622|gb|EAQ38796.1| sugar isomerase [Dokdonia donghaensis MED134]
          Length = 321

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 137/320 (42%), Positives = 196/320 (61%), Gaps = 10/320 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E+  +++L S +  E    F  AV+ I + KGRVVITGIGKS  I  K+ 
Sbjct: 8   IASAQKTINIEQAAIANLSSLIDEE----FAQAVQAIYSSKGRVVITGIGKSAIIAQKIV 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+KA++   ++    LIA
Sbjct: 64  ATLNSTGTPALFMHAADAIHGDLGSILIDDIVICISKSGTTPEIKALVPLIKKTENTLIA 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   S +   AD VL    + E+CP+ LAPTTS   QL IGDA+A+ALL+ R F+E D
Sbjct: 124 ITSNKTSFLGNEADYVLHAFVKEEACPNNLAPTTSTTAQLVIGDAVAVALLDLRGFTEKD 183

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L++   D+  +  + P V     + + I  +S+KR G  AVV  G  
Sbjct: 184 FAKYHPGGALGKRLYLTVQDICATHQN-PAVTPDASIKEVIVEISKKRLGVTAVVLNG-V 241

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GIIT+GD+ R   K+  L  L+ + +M +NPK +    +   A  +L +HNIS L+VV
Sbjct: 242 IQGIITDGDLRRMLAKNDSLEGLTAQQIMSENPKTVNHTAMAIAAKDILEEHNISQLLVV 301

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            D   A G+VH  DL++ GI
Sbjct: 302 KDGNYA-GVVHIHDLIKEGI 320


>gi|262273847|ref|ZP_06051660.1| arabinose 5-phosphate isomerase [Grimontia hollisae CIP 101886]
 gi|262222262|gb|EEY73574.1| arabinose 5-phosphate isomerase [Grimontia hollisae CIP 101886]
          Length = 322

 Score =  229 bits (583), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 196/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q  + ++  E+  ++ LE  +  +    F  A + I   +G+VV+ G+GKSGHIG+K+A+
Sbjct: 8   QAGITTLKTERDAITQLEQYINED----FVTACQLILNAQGKVVVMGMGKSGHIGNKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMI + D+++ +S SG + E+  +L   +R  I LI +
Sbjct: 64  TLASTGTPSFFVHPGEASHGDLGMIEKGDVVLAISNSGEASEIITLLPVVKRRGITLITM 123

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  A + L +    E+CP GLAPT+S    L +GDALA+AL++++ F+ +DF
Sbjct: 124 TSNPASTMARLAQVNLCIKVPKEACPIGLAPTSSTTATLVMGDALAVALMQAKGFTADDF 183

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +DVMHSGD +P V     + DA+  +S K  G  AVVD    +
Sbjct: 184 ALSHPGGALGRKLLLRIADVMHSGDKLPKVLPHHTIRDALLEMSAKGLGMTAVVDSQDSV 243

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   +  D+++  +  VM KNP  I  D L    ++L+ +  I+ L+V D
Sbjct: 244 LGIFTDGDLRRLLDQRIDVHSTDIGAVMGKNPTCISADMLAAEGLKLMEEKKINGLLVTD 303

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +    IG ++  DLL+ G++
Sbjct: 304 N-DTLIGALNMHDLLKAGVM 322


>gi|145637707|ref|ZP_01793360.1| KpsF [Haemophilus influenzae PittHH]
 gi|145269109|gb|EDK09059.1| KpsF [Haemophilus influenzae PittHH]
          Length = 311

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 182/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGDDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLAHHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPEDFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N    
Sbjct: 201 MQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAGT 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|253997534|ref|YP_003049598.1| KpsF/GutQ family protein [Methylotenera mobilis JLW8]
 gi|253984213|gb|ACT49071.1| KpsF/GutQ family protein [Methylotenera mobilis JLW8]
          Length = 341

 Score =  229 bits (583), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 142/303 (46%), Positives = 192/303 (63%), Gaps = 7/303 (2%)

Query: 41  LESS----LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           LESS    L   L  +F  AV  I   KGRVV+TG+GKSGHIG K+ASTLASTGTP+FF+
Sbjct: 34  LESSEIDALAQRLDHRFSEAVSLILQCKGRVVVTGMGKSGHIGGKIASTLASTGTPAFFM 93

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H AEASHGDLGMIT  D++I LS SG SDE+ AI+    R    +IAIT  + S +A  A
Sbjct: 94  HPAEASHGDLGMITAGDVVIALSNSGESDEVLAIVPPLTRLGASIIAITGNDASSLAKAA 153

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-T 215
           +I L+     E+CP GLAPT+S  + LA+GDALA+ +L+ R+F+  DF   HPGG LG  
Sbjct: 154 NIHLSAHVSREACPLGLAPTSSTTVALALGDALALCVLDLRDFTAEDFARSHPGGSLGRR 213

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           L V  SDVM +   +P V     L +A+  +S K  G  AVV+   +  GI T+GD+ R 
Sbjct: 214 LLVHVSDVMRTDAGVPHVSEQAGLAEALLEMSRKGLGLTAVVNAKHEPVGIFTDGDLRRA 273

Query: 276 FHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           F +++N ++ +  DVM  NP  I +D L   A++++ Q  I+ L+VVDD  + +G ++  
Sbjct: 274 FEQNVNVMTAKILDVMHVNPSTIHQDQLAIAAVEIMEQRKINGLLVVDDAGRLVGALNMH 333

Query: 334 DLL 336
           DLL
Sbjct: 334 DLL 336


>gi|94309252|ref|YP_582462.1| KpsF/GutQ family protein [Cupriavidus metallidurans CH34]
 gi|93353104|gb|ABF07193.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
          Length = 327

 Score =  228 bits (582), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 138/302 (45%), Positives = 187/302 (61%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G L+  F  AVE I    GRVV++GIGKSGHIG K+A+TLASTGTPSFFVH AEAS
Sbjct: 26  SALAGRLTPAFTTAVEMILGCTGRVVVSGIGKSGHIGRKVAATLASTGTPSFFVHPAEAS 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMITRDD++I  S SG + EL AI+   +R    LI+IT   +S +A  ++  L  
Sbjct: 86  HGDLGMITRDDVLIAFSNSGETAELLAIIPIVKRIGAGLISITGNAESNLAKLSNAHLDG 145

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP  LAPT S    LA+GDALA+A+L++R F E+DF   HPGG LG  L     
Sbjct: 146 AVAQEACPLNLAPTASTTAALALGDALAVAVLDARGFGEDDFARSHPGGALGRKLLTHVR 205

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
           DVM +G+++P V+   PL  A+  ++ K     AVVD   +  G+ T+GD+ R     +D
Sbjct: 206 DVMRTGNAVPAVRESTPLAQALMEITRKGMAMTAVVDPDGRAVGVFTDGDLRRLLETPRD 265

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T+ + +VM +NP  +  D L   A+Q++  + I+ L+VVDD     G +H  DL R  
Sbjct: 266 WKTVPIGEVMHRNPHTVHLDKLAVEAVQIMETNRINQLLVVDDDGHLAGALHIHDLTRAK 325

Query: 340 II 341
           +I
Sbjct: 326 VI 327


>gi|16273565|ref|NP_439820.1| KpsF [Haemophilus influenzae Rd KW20]
 gi|260581271|ref|ZP_05849089.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae RdAW]
 gi|1176843|sp|P45313|Y1678_HAEIN RecName: Full=Probable phosphosugar isomerase HI_1678
 gi|1574530|gb|AAC23324.1| kpsF protein (kpsF) [Haemophilus influenzae Rd KW20]
 gi|260092098|gb|EEW76043.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae RdAW]
          Length = 337

 Score =  228 bits (582), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 126/293 (43%), Positives = 182/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 47  LSQRLGDDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 106

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 107 DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITV 166

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 167 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 226

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N    
Sbjct: 227 MQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAGT 283

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 284 LNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|124515316|gb|EAY56826.1| Sugar isomerase, KpsF/GutQ family [Leptospirillum rubarum]
          Length = 332

 Score =  228 bits (582), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 131/332 (39%), Positives = 196/332 (59%), Gaps = 14/332 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+N  ++ A   +  E R LS+L  SL       F  AV  I    G+V +TG+GKSGH+
Sbjct: 6   MENR-IRKAREVLDEESRALSALSHSLDE----AFSRAVAAILQGSGKVAVTGMGKSGHV 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+T +STGTP+FF+H  EA HGDLG + R D ++ LS SG + E+  +L   +R  
Sbjct: 61  ARKIAATFSSTGTPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRID 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI+I  E +S +A  +++ L +P   E+ P G+APTTS    LA+GDALA+ LLE R 
Sbjct: 121 IPLISIVCERESTLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEERA 180

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF  LHPGG LG   ++  SD+MH+G+++P+V  G  L + I  ++ K+ G  A+ 
Sbjct: 181 FDVGDFARLHPGGMLGRRYYLKVSDLMHTGNALPVVASGTALREVIMEMTAKKLGIAAIT 240

Query: 258 DEGQKLKGIITEGDI-----FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLL 309
           D G ++ GI+T+GD+      R F     T     V+  M ++P  + +D L + A+ L+
Sbjct: 241 DPGNRVLGILTDGDLRRILERRTFDSVRGTFLDDPVDGFMTRSPVSVSKDLLASEAVALM 300

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               +S L+VVD+  +  GI+HF D LR  ++
Sbjct: 301 EHRKVSQLLVVDEEGQLEGILHFHDCLRAKVV 332


>gi|88798183|ref|ZP_01113769.1| predicted sugar phosphate isomerase involved in capsule formation
           [Reinekea sp. MED297]
 gi|88778959|gb|EAR10148.1| predicted sugar phosphate isomerase involved in capsule formation
           [Reinekea sp. MED297]
          Length = 323

 Score =  228 bits (582), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 125/296 (42%), Positives = 178/296 (60%), Gaps = 4/296 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L  QF  A + I   +GRVVITG+GKSGHIG+K+A+TLASTGTPSFFVH  EASHGD+G
Sbjct: 28  KLDEQFTKACQLILNCQGRVVITGMGKSGHIGNKMAATLASTGTPSFFVHPGEASHGDMG 87

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MIT  D++I LS SG   E+  +L   +R   PLI ++    S +   +D+ L    + E
Sbjct: 88  MITDKDVVIALSNSGEVSEIITLLPLIKRLGTPLIGLSGNPNSTLGQASDVHLFCGVDTE 147

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S    L +GDALAIALLE+R F+  DF   HPGG LG  L +   D+MH+
Sbjct: 148 ACPLNLAPTSSTTATLVMGDALAIALLEARGFTAEDFAFSHPGGSLGRKLLLKVGDIMHT 207

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLS 284
           GD+IP+V     + DA+ ++++K  G V +   G  L G+ T+GD+ R    D +     
Sbjct: 208 GDAIPVVHPEQSVSDALVVMTQKSLGMVTIQSNGD-LLGVFTDGDLRRALENDTDFRNTR 266

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + D+M  +P       L   A+  + +  I+ L+V D   +  G++H  D+LR G+
Sbjct: 267 IADLMHPHPLTTSAQNLAAQALFEMEERKITSLIVTDLDAQVAGVIHMHDILRAGV 322


>gi|329123240|ref|ZP_08251808.1| arabinose-5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
 gi|327471449|gb|EGF16897.1| arabinose-5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
          Length = 311

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/314 (42%), Positives = 188/314 (59%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  S+  E   L  L   L GE    F+  V  I A KGR+VI GIGKSG IG K+ 
Sbjct: 4   LQIAQNSLSVESNALLQLSQRL-GE---DFNQVVNLILACKGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTS ++ L +GDALA++L+ +RNF   D
Sbjct: 120 VTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSVLVTLGLGDALAVSLITARNFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P +       D +T ++E R G VA+V E ++
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--HLPTILPTTNFTDCLTAMNEGRMG-VALVMENKQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GDI R    N  + LN  + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 237 LKGIITDGDIRRALTANGAETLNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|163787883|ref|ZP_02182329.1| sugar phosphate isomerase, KpsF/GutQ family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876203|gb|EDP70261.1| sugar phosphate isomerase, KpsF/GutQ family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 321

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 183/295 (62%), Gaps = 4/295 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  A+E I   KGRV+ITGIGKS  I +K+ +TL STGTPS F+HAA+A HGDLG+
Sbjct: 29  LTEDFPKAIELIYNSKGRVIITGIGKSAIIANKIVATLNSTGTPSVFMHAADAIHGDLGL 88

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I +DD++I +S SG++ E+K ++   +  +  +IAIT    S +   A+ VL    E E+
Sbjct: 89  ILKDDVVICISKSGNTPEIKVLVPLIKNANNKMIAITGNTDSFLGQQANYVLNTYVEQEA 148

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CP+ LAPTTS   QL +GDA+A+ LLE R FS  DF   HPGG LG       + + S +
Sbjct: 149 CPNNLAPTTSTTAQLVMGDAIAVCLLELRGFSSKDFAKYHPGGALGKRLYLRVNDLSSQN 208

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVE 286
             P V +   L + I  ++EK  G  AVVD  +K+ GIIT+GD+ R   K  D+  L  +
Sbjct: 209 LKPQVGLETSLKEVIVEITEKMLGVTAVVD-NEKIVGIITDGDLRRMLSKSDDITGLKAK 267

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           D+M +NP+ I ED +   A +++ ++ IS L+V  +  K +GIVH  DL++ GII
Sbjct: 268 DIMSENPRRIEEDAMAVDAKEMMEEYGISQLLVAHN-DKYVGIVHLHDLIKEGII 321


>gi|148977769|ref|ZP_01814325.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrionales bacterium SWAT-3]
 gi|145962983|gb|EDK28253.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrionales bacterium SWAT-3]
          Length = 323

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 195/311 (62%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TLASTGT +
Sbjct: 18  EVAGLTQLDQYFNDD----FCKACDLILNNKGKVVVMGMGKSGHIGNKIAATLASTGTSA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T +  S +A
Sbjct: 74  FFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTGKPASNMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 134 TLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFALSHPGGAL 193

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH+GD++P+V     + DA+  +S+K  G  A+VD+  ++ GI T+GD+
Sbjct: 194 GRQLLLKLDDIMHTGDALPVVAPDALVRDALLEISQKGLGMTAIVDQDGQMAGIFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K  D+++  + DVM  NP V   + L    + L++  +I+ LM+  D  K +G +
Sbjct: 254 RRILDKRVDIHSTQIGDVMTLNPTVADPNMLAVEGLNLMQAKSINGLMLCQDG-KLVGAL 312

Query: 331 HFLDLLRFGII 341
           +  DLL+ G++
Sbjct: 313 NMHDLLKAGVM 323


>gi|116747458|ref|YP_844145.1| KpsF/GutQ family protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696522|gb|ABK15710.1| KpsF/GutQ family protein [Syntrophobacter fumaroxidans MPOB]
          Length = 357

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 124/296 (41%), Positives = 175/296 (59%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           +S  F  AV  I    GR+++TGIGKSG +G K+ +TL+STGTP+ F+H  EA HGDLGM
Sbjct: 58  ISESFARAVLWIYEAGGRIIVTGIGKSGIVGRKIVATLSSTGTPALFIHPVEAMHGDLGM 117

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +   D+++ LS SG +DEL  IL   +     +IA T +  S +A ++D+ +      E+
Sbjct: 118 VRAGDIVLALSNSGETDELNIILPSLKNIGTRIIAFTGDTSSTLAQYSDLTVYTGVPREA 177

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP GL PT S    LA+GDALA+ALL  RNF E DF+  HPGG LG  L V   DVM  G
Sbjct: 178 CPMGLVPTASTTAMLAMGDALAVALLRLRNFQERDFHRFHPGGHLGERLQVPLRDVMLKG 237

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSV 285
           D IP V    P+  A+  +S K  G   ++DE ++L+GI T+GD+ R  +   +     +
Sbjct: 238 DEIPAVPAATPVPAALAEMSRKGLGATLILDEDKRLQGIFTDGDLRRTLNSCSNFTEKRI 297

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +VM   P+ I     +  A++L+ +H I+VL VVD+ +   GI+H  DLL  G I
Sbjct: 298 SEVMTPGPRTISSHRSVADALELMERHLITVLPVVDENRNVEGILHLHDLLGKGRI 353


>gi|309750746|gb|ADO80730.1| Arabinose-5-phosphate isomerase [Haemophilus influenzae R2866]
          Length = 337

 Score =  228 bits (581), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/318 (41%), Positives = 194/318 (61%), Gaps = 13/318 (4%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K + ++ A  S+  E   L  L   L GE    F+  ++ I A +GR+VI GIGKSG IG
Sbjct: 26  KMNYLKIAQDSLSVESNALLQLSQRL-GE---DFNQVIDLILACEGRLVIGGIGKSGLIG 81

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F  
Sbjct: 82  KKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGN 141

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF
Sbjct: 142 KIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNF 201

Query: 200 SENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V 
Sbjct: 202 QPADFAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVM 258

Query: 259 EGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           E ++LKGIIT+GDI R    N  + LN  + +D M  +PK I ++  L+ A   ++   I
Sbjct: 259 ENEQLKGIITDGDIRRALTANGVETLNK-TAKDFMTSSPKTIHQEEFLSKAEDFMKAKKI 317

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L+VV+D    +G+V F
Sbjct: 318 HSLVVVNDENHVVGLVEF 335


>gi|242309521|ref|ZP_04808676.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524092|gb|EEQ63958.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 313

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 125/296 (42%), Positives = 182/296 (61%), Gaps = 4/296 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L+G+LS  F+  VE I  +KG  VITG+GKSGHI  K+A+TLASTGTPSFF+H  EA H
Sbjct: 21  ELKGQLSEDFNAVVECILKLKGHCVITGMGKSGHIAEKIAATLASTGTPSFFLHPGEALH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T++D +I +S SG S+E+  I+   ++  IPLI ++   KS +A      L + 
Sbjct: 81  GDLGMLTKEDAVIAISNSGESEEILRIIPIIKKREIPLIVMSGNPKSTMAKEGKYFLNVA 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            + E+CP  LAPT+S    LA+GDA+A+AL+++R F   +F + HPGG LG  L     D
Sbjct: 141 VKKEACPLQLAPTSSTTATLAMGDAIAVALMKARGFKPENFAMFHPGGSLGRKLLTQVKD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M S + +P+V +     D IT ++ KR G   V+D G +L GIIT+GD+ R    D   
Sbjct: 201 IMVSKE-LPIVNLETNFKDLITEMTSKRLGVCLVLDNG-RLVGIITDGDLRRALMDDKFD 258

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  ++M K PK I  D + T A  L+ +  I  L+V++  +K +GIV   ++ R 
Sbjct: 259 SNAAEIMTKQPKTIQSDAMATQAESLMMESKIKELVVMEG-EKVVGIVQLYEVGRI 313


>gi|313500035|gb|ADR61401.1| KpsF/GutQ family protein [Pseudomonas putida BIRD-1]
          Length = 310

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/311 (42%), Positives = 184/311 (59%), Gaps = 10/311 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++IA+ + ++ L   + GE    F  AVE + + KGR V+ G+GKSG IG K+ +T 
Sbjct: 7   AKEALIAQAQAVTQLAGRIDGE----FQSAVELLLSCKGRAVVCGMGKSGLIGKKMVATF 62

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG +DEL  ++   + F   +IA+T 
Sbjct: 63  ASTGTPSFFLHPAEAFHGDLGMLKPIDVLILISYSGETDELIKLIPSLKSFGNKIIAMTG 122

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A HADI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F   DF  
Sbjct: 123 NGNSTLAKHADIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKPMDFAR 182

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     DVMHS    P+V       D + +++  R G  AV+DE  KL G
Sbjct: 183 YHPGGSLGRKLLTRVRDVMHS--PAPVVSPSTSFHDCLLVMTRSRLGLTAVMDE-DKLVG 239

Query: 266 IITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+GD+ R   +D   +  +VE  M  +P  I ED  L+ A   +  + I  L VVDD 
Sbjct: 240 IVTDGDLRRALVEDEGVIHANVELFMTAHPHTIKEDAQLSEAEAYMLDNKIRALAVVDDQ 299

Query: 324 QKAIGIVHFLD 334
              +G+V   D
Sbjct: 300 NSVVGVVEIFD 310


>gi|37678637|ref|NP_933246.1| putative polysialic acid capsule expression protein [Vibrio
           vulnificus YJ016]
 gi|37197377|dbj|BAC93217.1| putative polysialic acid capsule expression protein [Vibrio
           vulnificus YJ016]
          Length = 323

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/318 (41%), Positives = 191/318 (60%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQYF----DEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAMAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  +D+MH+ + +P V     + DA+  +S+K  G  A+VD+   L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTDEQLPRVSPNALVRDALLEISQKGLGMTAIVDQDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+  D 
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLCQDG 306

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 307 -KLVGALNMHDLLKAGVM 323


>gi|293602378|ref|ZP_06684824.1| arabinose 5-phosphate isomerase [Achromobacter piechaudii ATCC
           43553]
 gi|292819140|gb|EFF78175.1| arabinose 5-phosphate isomerase [Achromobacter piechaudii ATCC
           43553]
          Length = 329

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/324 (42%), Positives = 193/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  A R++  E +GL  L +     L   F   V  + A +GRVV+TGIGK+GHI  
Sbjct: 10  DAALASARRTLQVETQGLLDLSA----RLDESFAQVVALLLACRGRVVVTGIGKTGHIAR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEA HGDLGMIT+DD++I +S+SG+  EL  IL  ARR    
Sbjct: 66  KIAATFASTGTPAFFVHAAEAVHGDLGMITKDDVVIAVSYSGAGQELLTILPVARRMGAK 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+AIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F 
Sbjct: 126 LVAITGNPQSELARLADVHLDGSVAQEACPLNLAPTASTTAALALGDALAVACLEARGFG 185

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L     DVM  GD++P+V  G P+  A+ ++S K  G   V D 
Sbjct: 186 PQDFARSHPGGALGRRLLTHVHDVMRQGDALPIVLAGTPVSQALEVMSAKGMGMTVVTDA 245

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  GI T+GD+ R    H D+ +L+VE  M ++P+ I  D L   A Q + +  +S +
Sbjct: 246 QHRPLGIFTDGDLRRLIARHGDIRSLTVEAGMTRSPRTISPDALAVEAAQQMDELRLSQM 305

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D     +G +H  DL+   ++
Sbjct: 306 LVLDADGALLGALHMHDLMAAKVV 329


>gi|295112279|emb|CBL29029.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Synergistetes bacterium SGP1]
          Length = 336

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 129/289 (44%), Positives = 178/289 (61%), Gaps = 5/289 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A   +    GRVV+ G+GKSGH+G K+++TLAS GTPSFF+HAAEASHGDLGM+ R+D+ 
Sbjct: 48  AAHAVHECSGRVVVVGLGKSGHVGRKISATLASLGTPSFFLHAAEASHGDLGMVRREDVG 107

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           + +S SG+S E+ A+L + RR    +IAIT   +S +A HADIVL    E E  P  LAP
Sbjct: 108 LFISNSGTSMEIVALLPHFRRLGAMMIAITGGLESPLAQHADIVLNSRVEKEGDPLQLAP 167

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
            +S  +QLA+GDALA  +   R     DF + HPGG LG  L     DVM     +P V 
Sbjct: 168 MSSTTLQLALGDALAAMVTLLRGLKREDFALFHPGGALGRRLLTRVRDVMGGPGQLPAVP 227

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
            G  + DA+  ++ K +G   VVDE  +L GI T+GD+ R   +   D   + +ED M K
Sbjct: 228 CGVSVQDALFSITSKGYGATCVVDEDGRLCGIFTDGDLRRLIGRRGTDAFLVRIEDAMTK 287

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           NPK I  D L   AM+++ +  ISVL+ ++D  + +G++H  DLL+ GI
Sbjct: 288 NPKGISPDALAAEAMRVMEREEISVLVALED-GRPVGMLHVHDLLKSGI 335


>gi|78188445|ref|YP_378783.1| KpsF/GutQ [Chlorobium chlorochromatii CaD3]
 gi|78170644|gb|ABB27740.1| KpsF/GutQ [Chlorobium chlorochromatii CaD3]
          Length = 328

 Score =  228 bits (580), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 188/295 (63%), Gaps = 3/295 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A++ + A KG+V+++G+GKSG I  K+A+T+ASTGT + F+H A+A+HGDLG+
Sbjct: 34  LDHHFAEAIQVMVACKGKVIVSGMGKSGIIAQKIAATMASTGTTALFLHPADAAHGDLGV 93

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  +D+++ LS SGS++EL  I+   R+    +I +T   +S +A +ADI L      E+
Sbjct: 94  VAAEDVVLCLSKSGSTEELNFIIPPLRQLGAKIIVMTGNPRSFLAQNADITLNTGVAKEA 153

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP+ LAPTTS    LA+GDALAI L++ + F+++DF + HP G LG  L V  SD+M + 
Sbjct: 154 CPYDLAPTTSTTAMLAMGDALAITLMQQKKFTQHDFALTHPKGSLGRRLTVKVSDIMATE 213

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE- 286
           +++P+V+    + + I  ++ KR+G  AVV+E  +L GI T+GD+ R        L+++ 
Sbjct: 214 NAVPMVRTNAAVTELILEMTSKRYGVSAVVNENGELAGIFTDGDLRRLVQSGRKFLALQA 273

Query: 287 -DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +VM   PK +  D L    + +L ++ I+ L+V D+ Q+ IG+VH  DLL  G+
Sbjct: 274 GEVMTARPKTVPPDMLARECLDILEEYRITQLLVCDNHQRPIGVVHIHDLLTLGL 328


>gi|311109292|ref|YP_003982145.1| arabinose 5-phosphate isomerase [Achromobacter xylosoxidans A8]
 gi|310763981|gb|ADP19430.1| arabinose 5-phosphate isomerase [Achromobacter xylosoxidans A8]
          Length = 329

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A R++  E +GL  L +     L   F   V  + A +GRVV++GIGK+GH+  
Sbjct: 10  ETALASARRTLQIECQGLMDLSA----RLDDSFTQTVAMLLACRGRVVVSGIGKTGHVAR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA HGDLGMIT+DD++I +S+SGS  EL  IL  ARR    
Sbjct: 66  KIAATLASTGTPAFFVHAAEAVHGDLGMITQDDVLIAISYSGSGQELLTILPVARRMGAK 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F 
Sbjct: 126 LIAITGNPQSELARLADVHLDASVAQEACPLNLAPTASTTAALALGDALAVACLEARGFG 185

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L     DVM  GD++P+V+ G P+  A+ ++S K  G   V D 
Sbjct: 186 PQDFARSHPGGALGRRLLTHVRDVMRQGDALPIVQAGTPVSQALEVMSAKGMGMTVVTDA 245

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  GI T+GD+ R   +  D+ +L+VE  M ++P+ I  D L   A Q + +  ++ +
Sbjct: 246 QHRPVGIFTDGDLRRLIARQGDIRSLTVESGMTRSPRSITPDALAVEAAQQMDKQRLNHM 305

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D     +G +H  DL+   ++
Sbjct: 306 LVLDSDGVLLGALHMHDLMAAKVV 329


>gi|145629231|ref|ZP_01785030.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.1-21]
 gi|145639166|ref|ZP_01794773.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           PittII]
 gi|144978734|gb|EDJ88457.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.1-21]
 gi|145271728|gb|EDK11638.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           PittII]
          Length = 311

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 183/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGEDFNQVIDLILACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N  + 
Sbjct: 201 MQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGVET 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I ++  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMTSSPKTIHQEEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|170700371|ref|ZP_02891381.1| KpsF/GutQ family protein [Burkholderia ambifaria IOP40-10]
 gi|171318648|ref|ZP_02907794.1| KpsF/GutQ family protein [Burkholderia ambifaria MEX-5]
 gi|172061745|ref|YP_001809397.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
 gi|170134715|gb|EDT03033.1| KpsF/GutQ family protein [Burkholderia ambifaria IOP40-10]
 gi|171096156|gb|EDT41079.1| KpsF/GutQ family protein [Burkholderia ambifaria MEX-5]
 gi|171994262|gb|ACB65181.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
          Length = 327

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 185/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGDFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVV    ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGDDVPRVGLDATLSDALFQITAKRLGMTAVVGADGRVAGIFTDGDLRRVLAREGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + DVM + P+ I  + L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPIVDVMTREPRTIGPEHLAVEAVELMERHRINQMLVVDADGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|152995154|ref|YP_001339989.1| KpsF/GutQ family protein [Marinomonas sp. MWYL1]
 gi|150836078|gb|ABR70054.1| KpsF/GutQ family protein [Marinomonas sp. MWYL1]
          Length = 342

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/315 (41%), Positives = 194/315 (61%), Gaps = 10/315 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R++  + + L++L +    +++ +F  AV  I A KGR +I G+GKSG IG K+A
Sbjct: 33  IDSARRTLSTQAQALANLAN----QVTEEFPKAVRMILASKGRTIICGMGKSGLIGKKIA 88

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFF+H  EA HGDLGMI  +D+++++S+SG ++EL  +L   + F  P IA
Sbjct: 89  ATLASTGTPSFFLHPGEAFHGDLGMIQPEDVLVLISFSGETEELMRLLPSLKSFGNPSIA 148

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +     S +A H D VL L  + E+CP+ LAPTTS  M  A+GDALA+AL+E RNF   D
Sbjct: 149 MVGNIDSTLAKHCDCVLDLSIDKETCPNNLAPTTSTTMTTAMGDALAVALMECRNFQPQD 208

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L     D+MH  D++P+      L DAI++++  R G V ++ E  K
Sbjct: 209 FARFHPGGSLGRKLLTRVKDLMHK-DNLPICTPETTLKDAISVMTHGRMG-VVLIQEAGK 266

Query: 263 LKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L GI T+GD+ R   K+   +   S+  +M  NPK I E+ ++  A + + +  I++L+V
Sbjct: 267 LLGIFTDGDLRRAMLKESEGMIHKSMASLMTANPKTINENVMIVQAEEQMLRDKITLLVV 326

Query: 320 VDDCQKAIGIVHFLD 334
           VDD Q   GI+   D
Sbjct: 327 VDDAQNLSGILEIYD 341


>gi|149190592|ref|ZP_01868861.1| putative polysialic acid capsule expression protein [Vibrio
           shilonii AK1]
 gi|148835590|gb|EDL52558.1| putative polysialic acid capsule expression protein [Vibrio
           shilonii AK1]
          Length = 322

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 8/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  A R +  E + L  LE         QF    + I   +G+V++ G+GKSGHIG K+A
Sbjct: 7   VSAAKRVLDTEVQALQHLERYFD----EQFESVCDAILNHQGKVIVMGMGKSGHIGKKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EA+HGDLGMI   DL+I +S SG S E+ ++    +R  I  ++
Sbjct: 63  ATLASTGTSAFFVHPGEAAHGDLGMIEARDLVIAISNSGESHEIISLFPVFKRLGITTVS 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T + +S +A  +D  L +    E+CP GLAPT+S+   L +GDALAIALLE+R F E D
Sbjct: 123 MTGKPESNMAKLSDFHLQITVPKEACPLGLAPTSSSTATLVMGDALAIALLEARGFGEED 182

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  SD+MHSG ++P+V     + DA+  +S+K  G   +VD    
Sbjct: 183 FALSHPGGALGRKLLLKLSDIMHSGKALPVVGPQTLVRDALLEISDKGLGMTTIVDNDMN 242

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D++  ++ +VM  NP     + L    + L++  NI+ L+++
Sbjct: 243 LLGIFTDGDLRRILDKRVDIHDTTIGEVMTVNPTTAAPNMLAAEGLNLMQSKNINGLVLL 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           DD  K +G ++  DLL+ G++
Sbjct: 303 DD-NKVVGALNMHDLLKAGVM 322


>gi|148825783|ref|YP_001290536.1| arabinose-5-phosphate isomerase [Haemophilus influenzae PittEE]
 gi|229846909|ref|ZP_04467016.1| KpsF [Haemophilus influenzae 7P49H1]
 gi|148715943|gb|ABQ98153.1| KpsF [Haemophilus influenzae PittEE]
 gi|229810398|gb|EEP46117.1| KpsF [Haemophilus influenzae 7P49H1]
          Length = 311

 Score =  227 bits (579), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 183/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGDDFNQVIDLILACEGRLVIGGIGKSGLIGKKIVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAMTSNKNSTLARHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       + +T+++E R G VA+V E ++LKGIIT+GDI R    N  + 
Sbjct: 201 MQT--RLPTILPTTNFTNCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAET 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|310765249|gb|ADP10199.1| KpsF/GutQ family protein [Erwinia sp. Ejp617]
          Length = 321

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 186/324 (57%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L +     L   F  A E + A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIETELSGAINLAA----RLDDHFVQACEMMLACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD V+ +    E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGNPASPLGTAADHVINIYTGREACPLGLAPTSSAVNTLMMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT L  C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDMMRKGEKLPRITDDVTIGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D    L G+ T+GD+ R  HK  N    +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DNAGVLVGVFTDGDLRRWLHKGGNIQAGIARVMTAGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             V+D+  +  G ++  D+   GI
Sbjct: 297 APVIDEQGRVTGAINMHDIHDAGI 320


>gi|311746387|ref|ZP_07720172.1| carbohydrate isomerase, KpsF/GutQ family [Algoriphagus sp. PR1]
 gi|126575273|gb|EAZ79605.1| carbohydrate isomerase, KpsF/GutQ family [Algoriphagus sp. PR1]
          Length = 322

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 187/320 (58%), Gaps = 9/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A R +  E   +  L   L G+    F   VE +   KGRVVITG+GKS  I  K+ +
Sbjct: 9   NTATRVLQNEANAILKLIDYLDGD----FVACVEHVLNSKGRVVITGVGKSAIIAQKIVA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL STGTP+ F+HAA+A HGDLGMI  DD+++ +S SG++ E+K ++   +     L+A+
Sbjct: 65  TLNSTGTPAIFMHAADAIHGDLGMIQEDDVVLCISKSGNTPEIKVLVPLLKNSGSLLVAL 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
            S   S +A HA  VL      E+CPH LAPTTS    LAIGDALA+ LLE+R F+ +DF
Sbjct: 125 VSNTDSYLAEHATYVLNATISEEACPHNLAPTTSTTAHLAIGDALAVCLLEARGFTSDDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L++  SD++ + D +P V     L + I  +S KR G  +V+D    L
Sbjct: 185 AKYHPGGSLGKQLYLKVSDLL-TKDQLPKVNEESGLAEVILEISGKRLGATSVIDGSGDL 243

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K  D+  L  +D+M   PK I +D     A+  ++++NI+ L+ + 
Sbjct: 244 VGIITDGDLRRMLQKSLDIQKLKAKDIMTAKPKTISKDEFAIRALNQMKKYNITQLVAM- 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  K  G VH  DL++ GI+
Sbjct: 303 DGNKIAGFVHIHDLMKEGIV 322


>gi|115352897|ref|YP_774736.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
 gi|115282885|gb|ABI88402.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
          Length = 327

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/301 (45%), Positives = 185/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGDFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S+SG S+EL AIL   +R    LIAIT   +S +   AD+ L   
Sbjct: 87  GDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAKLIAITGRAESSLGTLADVNLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F   DF   HPGG LG  L     D
Sbjct: 147 VSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSEDFARSHPGGALGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM SGD +P V +   L DA+  ++ KR G  AVV    ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRSGDDVPRVGLDATLSDALFQITAKRLGMTAVVGPDGRVAGIFTDGDLRRVLAREGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            TL + DVM + P+ I  + L   A++L+ +H I+ ++VVD     IG ++  DL    +
Sbjct: 267 RTLPIVDVMTREPRTIGPEHLAVEAVELMERHRINQMLVVDAHGALIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|224373605|ref|YP_002607977.1| carbohydrate isomerase, KpsF/GutQ family [Nautilia profundicola
           AmH]
 gi|223588923|gb|ACM92659.1| carbohydrate isomerase, KpsF/GutQ family [Nautilia profundicola
           AmH]
          Length = 314

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/303 (41%), Positives = 188/303 (62%), Gaps = 11/303 (3%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L +S++G        AVE     KG++++TG+GKSG IGSK+A+TLASTGTPSFF+H  E
Sbjct: 19  LNASVEG-----IEKAVEIAYNTKGKLIVTGVGKSGLIGSKIAATLASTGTPSFFLHPTE 73

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           A HGDLGMIT+DD ++ +S+SG S+EL  IL + +RF +PLIA+T +  S +A +AD+VL
Sbjct: 74  ALHGDLGMITKDDSVLAISYSGESEELIKILPHIKRFEVPLIAMTGKMNSTLARYADVVL 133

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVC 219
            +    E+CP  +APT+S  + LA+GDALA+ L++ RNF++ DF   HPGG LG  LFV 
Sbjct: 134 NIHVNKEACPLNIAPTSSTTLTLAMGDALAVCLMKKRNFTKEDFASFHPGGSLGKKLFVK 193

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             D+M      P+      L +AI  ++E + G V  +D  +++K I+++GD+ R    D
Sbjct: 194 VKDLMKR--EFPVADEDDTLQEAIIKMTEGKLGHVLFLD-NKRVKAILSDGDLRRAMMSD 250

Query: 280 LNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L  +  D    +PK I ++ L   A++ +  + I  L V D+     G++H  +L+ 
Sbjct: 251 KFDLKAKAIDFATIDPKTISKEVLAADALKFMEDNKIQFLPVTDENGNIAGVIHIHNLVE 310

Query: 338 FGI 340
            GI
Sbjct: 311 AGI 313


>gi|169837063|ref|ZP_02870251.1| arabinose 5-phosphate isomerase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 320

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/324 (39%), Positives = 205/324 (63%), Gaps = 16/324 (4%)

Query: 28  LRSIIAEKRGLSSLESS--LQGELSF--QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  I+   R + +LE++   Q  L+   +F  AV  +  +KG++V+TG+GKSGHIG+K+A
Sbjct: 1   MNDILKTAREVLTLEANELTQNALTLNEKFVSAVRTMFDVKGKIVVTGVGKSGHIGAKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPSFF+H  EA HGDLGMI++DD ++ +S+SG S+E+  IL + +RF + +I 
Sbjct: 61  ATLASTGTPSFFLHPTEAMHGDLGMISKDDAVLAISFSGESEEVVRILPHVKRFGVKVIG 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +  +  S +   +D  + L  + E+CP G APT+S  + LA+GDALA+ L++ RNF + D
Sbjct: 121 MARKESSSLGKFSDEFIKLDVKKEACPLGAAPTSSTTLTLALGDALAVCLMKMRNFKQED 180

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  LFV A DVM S +++P+V     L  AI  ++  + G V + +   K
Sbjct: 181 FANFHPGGSLGKRLFVKAKDVMRS-ENLPIVSENVSLKAAIDAMTHGKVGNVLLTNTNGK 239

Query: 263 LKGIITEGDIFR-----NFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISV 316
           L  ++++GD+ R     NF  D+N  +++    KNPK++ ++ +L V A+ L+ ++ I +
Sbjct: 240 LVAVLSDGDLRRALMSENF--DINDSAIK-YATKNPKILDDENILAVDALTLIEKYKIQL 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L+VV +    IGI+H  DL   G+
Sbjct: 297 LVVVKNSV-PIGILHIHDLTSLGL 319


>gi|119356240|ref|YP_910884.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353589|gb|ABL64460.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides DSM 266]
          Length = 326

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/296 (40%), Positives = 188/296 (63%), Gaps = 3/296 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A+  I + KG+++++G+GKSG IG K+A+T+ASTGT + F+H A+A+HGDLG
Sbjct: 31  RLDDNFARAIALILSCKGKIIVSGMGKSGIIGQKIAATMASTGTTALFLHPADAAHGDLG 90

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++   D++I LS SG+++EL  I+   ++    +IA+T  ++S +A  ADIVL    E E
Sbjct: 91  IVCSGDIVICLSKSGTTEELNYIIPALKKTGASIIALTGNSRSYLAKSADIVLDTGIEQE 150

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP+ LAPTTS    LA+GDAL++ L++++NF+  DF + HP G LG  L +  SD+M S
Sbjct: 151 ACPYDLAPTTSTTAMLAMGDALSMTLMQAKNFTPVDFALTHPKGSLGRRLTMKVSDIMAS 210

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           GD++P+V     + D I  ++ KR+G  A++++   L GI T+GD+ R   K  D   L+
Sbjct: 211 GDTMPVVNEDAAVTDLILEMTSKRYGVSAIINKKGVLTGIFTDGDLRRLVQKGDDFLNLT 270

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              VM  NPK +  + L T  +++L  + I+ L+V D  Q+  GI+H  DL+  G+
Sbjct: 271 ARSVMTANPKTVGAERLATECLEILETYRITQLIVCDIDQRPAGIIHIHDLISLGL 326


>gi|126209040|ref|YP_001054265.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097832|gb|ABN74660.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 311

 Score =  227 bits (578), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 188/293 (64%), Gaps = 7/293 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   LS +F+ A+E I + +GR+V+ GIGKSG +G K+ +T ASTGTPSFF+H  EA H
Sbjct: 20  SLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D++I++S SG +D++  ++   + F   +IA+T  + S +A HADI+L + 
Sbjct: 80  GDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIG 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SD 222
            E E+C + LAPTTS ++ +A+GDALAIAL+++RNF   DF   HPGG LG   +C   D
Sbjct: 140 VEKEACTNNLAPTTSTLVTMALGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN 281
           VM    S+P+V       + + I++E R G VA+V E   L GIIT+GDI R    K  N
Sbjct: 200 VMIR--SLPIVSPTAIFSECLNIMNEGRIG-VALVMEHDCLLGIITDGDIRRLLADKGAN 256

Query: 282 TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +L  + + +M KNPK ILE T L  A + ++  ++  L+V+++  + +GI  F
Sbjct: 257 SLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEF 309


>gi|145633353|ref|ZP_01789084.1| KpsF [Haemophilus influenzae 3655]
 gi|144986199|gb|EDJ92789.1| KpsF [Haemophilus influenzae 3655]
          Length = 311

 Score =  227 bits (578), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 125/293 (42%), Positives = 183/293 (62%), Gaps = 9/293 (3%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  ++ I A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 21  LSQRLGDDFNQVIDLILACEGRLVIGGIGKSGLIGKKIVATFASTGTPSFFLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 81  DLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAMTSNKNSTLARHADYVLDITV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D 
Sbjct: 141 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQ 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKD 279
           M +   +P +       + +T+++E R G VA+V E ++LKGIIT+GDI R    N  + 
Sbjct: 201 MQT--RLPTILPTTNFTNCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAET 257

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           LN  + +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 258 LNK-TAKDFMASSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 309


>gi|209694098|ref|YP_002262026.1| arabinose 5-phosphate isomerase [Aliivibrio salmonicida LFI1238]
 gi|208008049|emb|CAQ78188.1| arabinose 5-phosphate isomerase [Aliivibrio salmonicida LFI1238]
          Length = 324

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/302 (42%), Positives = 191/302 (63%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   ++  F  A + +   K +VVI G+GKSGHIG K+A+TLASTGTPSFFVH  EAS
Sbjct: 23  TQLNNYINDDFTKACQLMLECKRKVVIMGMGKSGHIGKKIAATLASTGTPSFFVHPGEAS 82

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI + D+I+ +S SG + E+ A+L   +R  I LI +TS++ S +A  AD+ L +
Sbjct: 83  HGDLGMIEKGDVILAISNSGEAAEILALLPVIKRQGITLITMTSKSSSSMANVADVNLLI 142

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
               E+CP  LAPT+S    L +GDALA+ALLE+R F+ +DF + HPGG LG  L +  +
Sbjct: 143 TVPQEACPLALAPTSSTTATLVMGDALAMALLEARGFTSDDFALSHPGGALGRKLLLHLA 202

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+ D +P+V     +  A+  +SEK  G  A+VDE QK+ GI T+GD+ R      D
Sbjct: 203 DIMHTDDELPMVTSDALIKTALLEVSEKGLGMTAIVDEDQKVIGIFTDGDLRRLLDNRID 262

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++T ++ +VM   P V   + L    + L++   I+ L++ D+  + +G ++  DLL+ G
Sbjct: 263 IHTQTIGEVMAHTPSVASPNLLAVEGLNLMQDKKINGLLLCDENNRLVGALNMHDLLKAG 322

Query: 340 II 341
           ++
Sbjct: 323 VM 324


>gi|289676089|ref|ZP_06496979.1| KpsF/GutQ [Pseudomonas syringae pv. syringae FF5]
          Length = 271

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 123/259 (47%), Positives = 170/259 (65%), Gaps = 5/259 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T +++S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 124 LTGDSESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    
Sbjct: 184 FAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGT 243

Query: 263 LKGIITEGDIFRNFHKDLN 281
           L GI T+GD+ R   + ++
Sbjct: 244 LAGIFTDGDLRRTLDRPVD 262


>gi|198284718|ref|YP_002221039.1| KpsF/GutQ family protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667398|ref|YP_002427397.1| sugar isomerase, KpsF/GutQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198249239|gb|ACH84832.1| KpsF/GutQ family protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519611|gb|ACK80197.1| sugar isomerase, KpsF/GutQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 328

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A E +    GR+V++G+GKSG I  K+A+TLASTG+P+ F+H AE SHGDLGM
Sbjct: 33  LDADFVGACELLLNCSGRIVVSGMGKSGIIAKKIAATLASTGSPALFLHPAEGSHGDLGM 92

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +TR D ++ LS SG + EL AIL   +R ++PL+A+T   +S +A  A + L      E+
Sbjct: 93  LTRQDCLLALSNSGETAELLAILPVVKRLAVPLLAMTGNPQSTLARTAAVHLNCSVAREA 152

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP  LAPT S    LA+GDALA+A+L++R FS +DF + HPGG LG  L +   DVMH G
Sbjct: 153 CPLNLAPTASTTASLAMGDALAMAILQARGFSADDFALSHPGGSLGKRLLLRVQDVMHRG 212

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           D+IP V +  PL DAI  +S K  G  AVVD   ++ GI T+GD+ R F   ++L    +
Sbjct: 213 DAIPRVGLETPLQDAILEISSKGLGMTAVVDAEDRVVGIFTDGDLRRAFAQRQNLWEQPM 272

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +    P  I    L   A+ L+  H I  L+V D   + IG ++  DLLR GI+
Sbjct: 273 AALAHAQPATIAAGALAAEALALMEHHRIGALLVTDSGARLIGALNMHDLLRAGIV 328


>gi|311031990|ref|ZP_07710080.1| KpsF/GutQ family protein [Bacillus sp. m3-13]
          Length = 329

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 117/288 (40%), Positives = 185/288 (64%), Gaps = 3/288 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E I + KGRVVITGIGKSG IG K+ +T+ASTGTPSFF+H +E  HGDLGM+T+DD++
Sbjct: 42  ALELILSCKGRVVITGIGKSGIIGRKINATMASTGTPSFFLHPSEGLHGDLGMVTKDDVV 101

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S SG ++E+  ++   +R    +I+I     S +   +++VL++    E+CP GLAP
Sbjct: 102 IAISNSGETEEVLNLIPSIKRIGAKIISIVKNPNSTLGMKSNVVLSIGDVKEACPLGLAP 161

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
           TTS  + LA+GDALA+ALLE+R F   DF + HP G LG  L +  +DV+ + +  P++ 
Sbjct: 162 TTSTTVTLALGDALAVALLEARKFRPEDFALFHPSGSLGRKLLLTVNDVVVATNKNPMIL 221

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKN 292
               + +A+ +++ +  G  +VVDE ++L+GI+T+GDI R F   ++ L  +VE+     
Sbjct: 222 GSATIQEALFVMTAQGLGATSVVDENRQLQGILTDGDIRRAFASGMDILNRTVEEFCNTR 281

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P  I +  L   A+  + +  ISVL V+D+  + +G++   DL+  G+
Sbjct: 282 PLCIEQGVLAVEALSTMDERKISVLPVLDEINRPVGMIQIHDLMNLGL 329


>gi|15604365|ref|NP_220881.1| arabinose-5-phosphate isomerase [Rickettsia prowazekii str. Madrid
           E]
 gi|7388419|sp|Q9ZD42|Y505_RICPR RecName: Full=Uncharacterized protein RP505
 gi|3861057|emb|CAA14957.1| KPSF PROTEIN (kpsF) [Rickettsia prowazekii]
 gi|292572118|gb|ADE30033.1| KpsF [Rickettsia prowazekii Rp22]
          Length = 319

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 177/287 (61%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQ---GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSATSALETLSNNIPSDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG PSF++H AEASHGDLGMITR+DL+++LS SG + EL  I+ Y    SI + A+T   
Sbjct: 69  TGMPSFYLHPAEASHGDLGMITRNDLVMMLSNSGETKELFNIIEYCNNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+  E+   G  PT S+++ L++GDA+   + E R F+ +DF + H
Sbjct: 129 NSTLAKRSDFLLKIPECQEASLIG-TPTISSLIMLSLGDAIMTVIHEERGFTRDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV       + I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKNIMRSGDEIPLVYEDTSFTETIIIMNKKRLGCTLVTDKEQNLIGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ RN H  ++  +   +M KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRNIHDQIHLKTASSIMTKNPHYISSEIFAQEALNLMKAKNIT 294


>gi|328684725|gb|AEB33793.1| putative sugar phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 10]
          Length = 311

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 188/293 (64%), Gaps = 7/293 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   LS +F+ A+E I + +GR+V+ GIGKSG +G K+ +T ASTGTPSFF+H  EA H
Sbjct: 20  SLHNRLSTEFNQAIEMILSCEGRLVVAGIGKSGLVGQKMVATFASTGTPSFFLHPTEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D++I++S SG +D++  ++   + F   +IA+T  + S +A HADI+L + 
Sbjct: 80  GDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKIIAMTGNSHSTLAQHADIILNIG 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SD 222
            E E+CP+ LAPTTS ++ +A+GDALAIAL+++RNF   DF   HPGG LG   +C   D
Sbjct: 140 VEKEACPNNLAPTTSTLVTMALGDALAIALIKARNFQAMDFARFHPGGSLGRKLLCTVKD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN 281
           VM    S+ +V       + + I++E R G VA+V E   L GIIT+GDI R    K  N
Sbjct: 200 VMIR--SLXIVSPTAIFSECLNIMNEGRIG-VALVMEHDCLLGIITDGDIRRLLADKGAN 256

Query: 282 TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +L  + + +M KNPK ILE T L  A + ++  ++  L+V+++  + +GI  F
Sbjct: 257 SLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLVVMNEENRVVGIFEF 309


>gi|86133526|ref|ZP_01052108.1| sugar isomerase [Polaribacter sp. MED152]
 gi|85820389|gb|EAQ41536.1| sugar isomerase [Polaribacter sp. MED152]
          Length = 322

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/325 (40%), Positives = 194/325 (59%), Gaps = 11/325 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGEL-SFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           K+S +  A  +I+AE + +S +      EL    F  A+  I   KGRV+ITGIGKS +I
Sbjct: 4   KSSIIANAKETILAESKAISQM-----AELVDINFENAINCIYNSKGRVIITGIGKSANI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            SK+ +T  STGTP+ F+HAA+A HGDLG +  DD++I +S SG++ E+K +L   + + 
Sbjct: 59  ASKIVATFNSTGTPAVFMHAADAIHGDLGNVLEDDVVICISKSGNTPEIKVLLPLIKNYG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IAIT    S +  +AD VL    E E+CP+ LAPTTS   QL +GDALA+ LL+ + 
Sbjct: 119 NKVIAITGNIDSFLGKNADFVLNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLKLKG 178

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG LG  L++  SD++ + + +P V+    +   I  +SEKR G  AV+
Sbjct: 179 FTSKDFAKYHPGGALGKRLYLRVSDLIKNNE-LPKVEKDDSIAKVIVEISEKRLGVTAVM 237

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    + GIIT+GD+ R   K   +   + +D+M KNPK I  + +   A++ L   +I+
Sbjct: 238 D-NNTIVGIITDGDVRRMLTKTTQIENFTAKDIMGKNPKTINSEAMAIEALEALENDSIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
            ++ VDD     G+VH  DL++ GI
Sbjct: 297 QILAVDDNNNYAGVVHLHDLIKEGI 321


>gi|311695328|gb|ADP98201.1| LOW QUALITY PROTEIN: KpsF/GutQ family protein [marine bacterium
           HP15]
          Length = 325

 Score =  226 bits (577), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/318 (42%), Positives = 187/318 (58%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A+R+I  E+  + +LES +      QF  A E I    GRVV+TG+GKSGHIG+K+A+TL
Sbjct: 13  AIRAIRIERDAIDALESRIDD----QFTRACEVIMNCTGRVVVTGMGKSGHIGNKIAATL 68

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSF     + +    G IT  D++I +S SG++ E+  IL   +R   PLI++T 
Sbjct: 69  ASTGTPSFSCIPEKQATATWG-ITPQDVVIAISNSGNTSEVVTILPLIKRMGAPLISMTG 127

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R FS  DF  
Sbjct: 128 NATSTLAREAVANLDVSVMVEACPLGLAPTSSTTATLVMGDALAVALLEARGFSAEDFAF 187

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  SD+MH+GD IP+V  G PL  A+  +S K  G   VV+    L G
Sbjct: 188 SHPGGSLGRRLLLRVSDIMHTGDQIPVVNEGTPLSGALLEISRKGLGMTTVVNGEGTLTG 247

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +  D++   + +VM +N K I  D L   A+ ++ +  I+ L V +D 
Sbjct: 248 IFTDGDLRRTLDRSVDIHHTPINEVMTRNGKTIQADHLAAEALNIMEEMKINALPVTNDS 307

Query: 324 QKAIGIVHFLDLLRFGII 341
              IG ++  DLLR G+I
Sbjct: 308 GALIGAINMHDLLRAGVI 325


>gi|21673109|ref|NP_661174.1| carbohydrate isomerase KpsF/GutQ family protein [Chlorobium tepidum
           TLS]
 gi|21646183|gb|AAM71516.1| carbohydrate isomerase, KpsF/GutQ family [Chlorobium tepidum TLS]
          Length = 299

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 126/296 (42%), Positives = 183/296 (61%), Gaps = 5/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A++ + A  G+++I+G+GKSG IG K+A+TL+STGT + F+H AEA+HGDLG+
Sbjct: 5   LDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHGDLGV 64

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           ++  D +I LS SG ++EL  IL   R     +IA T   +S +A +AD+VL    E E+
Sbjct: 65  VSEGDTVICLSKSGMTEELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGVEQEA 124

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP+ LAPT+S    LA+GDALAI L++ +NF++ +F + HP G LG  L +   DVM +G
Sbjct: 125 CPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEFALTHPKGSLGKQLTMRVGDVMATG 184

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLS 284
           D++P+V     L D I  ++ KR+G   VVD   KL GI T+GD+ R        L+  +
Sbjct: 185 DALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFLDKKA 244

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           VE VM  NPK +  D      ++LL  H I+ LMV D+ +  +GIVH  DL+  G+
Sbjct: 245 VE-VMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL 299


>gi|254509092|ref|ZP_05121194.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus 16]
 gi|219547973|gb|EED24996.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus 16]
          Length = 329

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 200/320 (62%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+     E    F  A E I + K G+VV+ G+GKSGH+G+K+A+
Sbjct: 15  AALDVLKTEIEALEQLDQYFNDE----FIQACELILSNKEGKVVVMGMGKSGHVGNKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EA+HGDLGMI   D+++ +S SG S E+  +    +R +I +I++
Sbjct: 71  TLASTGTPSFFVHPGEAAHGDLGMIKPGDIVLAISNSGESSEILGLFPVLKRLNIKIISM 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  +D+ L +    E+CP  LAPT+S    + +GDALA+AL+++R F+  DF
Sbjct: 131 TGKPHSNMAKLSDLHLQITVPKEACPIQLAPTSSTTATIVMGDALAMALMQARGFTAEDF 190

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MHSG+++PLVK    + +A+  +S+K  G  AVVD+ Q+L
Sbjct: 191 ALSHPGGALGRKLLLKLADIMHSGENLPLVKPTALVREALLEISQKGLGMTAVVDDHQQL 250

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T S+ DVM  NP V   + L    + L++  +I+ L++ D
Sbjct: 251 LGIFTDGDLRRILDKRVDIHTASIGDVMTANPTVASPNMLAAEGLNLMQAKSINGLILCD 310

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  D+L+ G++
Sbjct: 311 QG-KVVGALNMHDMLKAGVM 329


>gi|209521313|ref|ZP_03270030.1| KpsF/GutQ family protein [Burkholderia sp. H160]
 gi|209498259|gb|EDZ98397.1| KpsF/GutQ family protein [Burkholderia sp. H160]
          Length = 327

 Score =  226 bits (576), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 186/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I + +GRVV++GIGKSGHI  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRNQLDGGFVGAVDHILSCRGRVVVSGIGKSGHIARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTADDVFLALSNSGETEELMAILPLIKRIGAKLIAMTGRPGSSLAQLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VSKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD   ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDQLPQVTPDATVRDALFQLTSKRMGMTAIVDHEGRVTGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L +  VM   P+ I  D L   A++L+ ++ I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RQLPIASVMTAGPRTIGPDHLAVEAVELMERYRINQMLVVDEKGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|255531958|ref|YP_003092330.1| KpsF/GutQ family protein [Pedobacter heparinus DSM 2366]
 gi|255344942|gb|ACU04268.1| KpsF/GutQ family protein [Pedobacter heparinus DSM 2366]
          Length = 321

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 135/321 (42%), Positives = 189/321 (58%), Gaps = 12/321 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSF------QFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +SII  + G+S+L+   Q  L         F   V  I   KGRV++TGIGKS  I  K+
Sbjct: 5   KSII--EAGVSTLQLEAQAILGLINNINDDFVKVVNLIIESKGRVIVTGIGKSAIIAQKI 62

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +T  STGTP+ F+HAA+A HGDLGMI +DD++I +S SG++ E+K +    ++    +I
Sbjct: 63  VATFNSTGTPAIFMHAADAIHGDLGMIQKDDIVICISKSGNTPEIKVLAPLLKQSGNTMI 122

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            +  +  S +A  AD+VL    E E+CPH LAPTTS   QLA+GDALAI LL +R+F+E 
Sbjct: 123 GMIGQLNSELAMQADLVLNTYVEKEACPHNLAPTTSTTAQLAMGDALAICLLHARDFNEQ 182

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG      +  +   +  P +     + D I  +S+ R G V VVD G  
Sbjct: 183 DFARYHPGGSLGKKLYLKTGDLALKNQKPSICADASVKDVIIEISQNRLGAVVVVD-GND 241

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GIIT+GDI R   K  DL  +   D+M  NPK I +D L   A+++++++NI+ L+V 
Sbjct: 242 ILGIITDGDIRRMLEKYSDLTNIKASDLMNPNPKRIEKDLLALNALEIIKENNITQLLVT 301

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
            D     GIVH  DLL+ GII
Sbjct: 302 -DAGSYFGIVHLHDLLQEGII 321


>gi|298209032|ref|YP_003717211.1| Sugar isomerase, KpsF/GutQ family protein [Croceibacter atlanticus
           HTCC2559]
 gi|83848959|gb|EAP86828.1| Sugar isomerase, KpsF/GutQ family protein [Croceibacter atlanticus
           HTCC2559]
          Length = 321

 Score =  226 bits (575), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 136/326 (41%), Positives = 193/326 (59%), Gaps = 10/326 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++N  +  A  +I+ E + ++ LES L       F  AVE I   KGRV+ITGIGKS  I
Sbjct: 3   LQNKILSVAKDTILNEAKAVAHLESLLDD----SFSNAVECIYNSKGRVIITGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +K+ +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+K ++   + F+
Sbjct: 59  ATKIVATLNSTGTPAIFMHAADAIHGDLGTILEDDVVICISKSGNTPEIKVLVPLIKNFN 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIAIT    S +   AD VL    E E+CP+ LAPTTS   QL IGDALA+ LL+ R 
Sbjct: 119 NKLIAITGNKDSFLGQQADYVLNAFVEKEACPNNLAPTTSTTAQLVIGDALAVCLLDLRG 178

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS  DF   HPGG LG  L++  SD+  +    P V +   +   I  +SEK  G  AV 
Sbjct: 179 FSSKDFAKYHPGGALGKKLYLRVSDITKANQK-PEVSLTTDIKKVIVEISEKMLGVTAVT 237

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            +  K+ GIIT+GD+ R   K  +   L+ +D+M ++PK I  D +   AM +L  + IS
Sbjct: 238 KD-NKIVGIITDGDLRRMLAKTDNFEALTAQDIMSESPKTIDNDAMAVDAMDVLETNGIS 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+  ++   + G+VH  +L+R GII
Sbjct: 297 QLLAEENGTYS-GVVHLHNLIREGII 321


>gi|254469051|ref|ZP_05082457.1| arabinose 5-phosphate isomerase [beta proteobacterium KB13]
 gi|207087861|gb|EDZ65144.1| arabinose 5-phosphate isomerase [beta proteobacterium KB13]
          Length = 326

 Score =  225 bits (574), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 129/314 (41%), Positives = 194/314 (61%), Gaps = 7/314 (2%)

Query: 29  RSIIAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           ++II   + +  +ES    + Q  +   F   + K+   KGR++++G+GKSGHI  K+AS
Sbjct: 9   KTIIGSAKKVLDIESIEINNAQKFIDDNFADIIIKLSECKGRIILSGMGKSGHIAGKIAS 68

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STG+P+FF+H  EASHGDLGMIT DD++I LS SG SDE+  ++   +R    ++AI
Sbjct: 69  TLSSTGSPAFFMHPGEASHGDLGMITHDDIVIFLSNSGESDEIYNLIPSIKRIGASIVAI 128

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  KS +A +AD  ++     E+CP GLAPT S+ + LAIGDA+A++L + + F+  DF
Sbjct: 129 TSNEKSEIAKYADHHISSKVSTEACPLGLAPTASSALMLAIGDAIAVSLFQLKGFTTEDF 188

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG   F+   +VM S + +PLV     L   I +++EK+ G  AVV    K 
Sbjct: 189 LKSHPGGALGKNKFIKIKEVMRSINEVPLVSPDDSLKQTIKLITEKKVG-YAVVANKLKY 247

Query: 264 KGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            GI T+GD+ R+  K+ + +  +   M  NP  I E  L T A +L+ ++ IS L+VVD+
Sbjct: 248 LGIFTDGDLRRSILKEASISDEISKWMSTNPFFINEHNLATSAAELMEKNKISSLVVVDN 307

Query: 323 CQKAIGIVHFLDLL 336
               +G+++F DLL
Sbjct: 308 KDDLVGVINFQDLL 321


>gi|296126251|ref|YP_003633503.1| KpsF/GutQ family protein [Brachyspira murdochii DSM 12563]
 gi|296018067|gb|ADG71304.1| KpsF/GutQ family protein [Brachyspira murdochii DSM 12563]
          Length = 321

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 132/299 (44%), Positives = 182/299 (60%), Gaps = 8/299 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  +L   F  AV+++  I+GRV+ +G+GKSGHI  K A+T ASTGTPSFFV   E  HG
Sbjct: 21  LSDKLDINFENAVKELFKIRGRVITSGVGKSGHIARKAAATFASTGTPSFFVDPNECMHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D GMIT+DD  I+ S  G S E+  ++ +  R +I  IA+T+E  S +A +A IVL    
Sbjct: 81  DFGMITKDDYCILYSKGGESREIIELVNWLLRQNISYIAVTNEIDSTLAKNAKIVLLTYV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           + E+CP  LAPT S    LA+ DALA AL+E R F   DF V HPGG LG        +M
Sbjct: 141 KEEACPLKLAPTVSTTASLALSDALATALMEIRGFRAEDFAVFHPGGSLGRQLAKVKSIM 200

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LN 281
           H+ +++P+V I   L DA+  + E + G    VD    LKGII +GD+ R   KD    N
Sbjct: 201 HT-ENLPIVSINATLQDALFKIIECKLGVAIAVDNNNILKGIIVDGDLKRLLVKDNDIQN 259

Query: 282 TLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
            LS  V+D+M  +PKVI EDTL+  A+ ++ +  I+ L+V+D +  K IG+VH  D+L+
Sbjct: 260 ILSKKVKDIMNTSPKVIYEDTLIGEALHMM-EGKITNLVVLDKENAKPIGVVHIHDILK 317


>gi|163756914|ref|ZP_02164022.1| sugar phosphate isomerase, KpsF/GutQ family protein [Kordia
           algicida OT-1]
 gi|161323150|gb|EDP94491.1| sugar phosphate isomerase, KpsF/GutQ family protein [Kordia
           algicida OT-1]
          Length = 322

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 134/325 (41%), Positives = 191/325 (58%), Gaps = 9/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+S +  A ++I  E   + +L S +  E    F  AV  I    GRVV+TGIGKS +I 
Sbjct: 4   KDSIISAAKQTIETEYNAIKNLISLIDDE----FAEAVSYIYNSNGRVVVTGIGKSANIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +TL STGTP+ F+HAA+A HGDLG+I   D +I +S SG++ E+K ++   +    
Sbjct: 60  TKIVATLNSTGTPAIFMHAADAIHGDLGIIQEHDTVICISKSGNTPEIKVLVPLIKNSEN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAITS  +S +   AD VL    E E+CP+GLAPTTS   QL +GDALAI LLE R F
Sbjct: 120 KLIAITSNRESFLGTQADYVLHAYVEKEACPNGLAPTTSTTAQLVLGDALAICLLELRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG       + M S +  P V     + D I  +S+   G  AV+++
Sbjct: 180 SSKDFAKYHPGGALGKKLYLRVNDMSSVNQKPKVFADSSVKDVIVEISKGMLGATAVIND 239

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +++ G+IT+GDI R    +  +  L+ +D+M  NPK I  D +   A++++  + IS L
Sbjct: 240 AEEIIGVITDGDIRRMLSNNDFIGNLTAKDIMSSNPKRIENDAMAVEALEVMEDNGISQL 299

Query: 318 MVVDDCQ-KAIGIVHFLDLLRFGII 341
           MV  + Q K  GIVH  DL++ GI+
Sbjct: 300 MV--EAQGKYAGIVHLHDLVKEGIL 322


>gi|255323627|ref|ZP_05364757.1| arabinose 5-phosphate isomerase [Campylobacter showae RM3277]
 gi|255299341|gb|EET78628.1| arabinose 5-phosphate isomerase [Campylobacter showae RM3277]
          Length = 319

 Score =  225 bits (574), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 120/297 (40%), Positives = 189/297 (63%), Gaps = 8/297 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  +F  AVE +   KG+VV+TG+GKSGH+G+K+A+TLASTGTPSFF+H  EA HGDLGM
Sbjct: 26  LDGEFEKAVEVLYKTKGKVVVTGVGKSGHVGAKIAATLASTGTPSFFMHPTEAMHGDLGM 85

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I +DD ++ +S+SG S+EL  IL + +RF +P++A+  +  S +   ++  + L    E+
Sbjct: 86  IGKDDTLLAISFSGESEELTKILPHVQRFGVPIVAMARDKFSTLGKFSNSFVKLDVSKEA 145

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP   APT+S  + LA+GDALA+ L+E R F + DF   HPGG LG  LF+   DVM S 
Sbjct: 146 CPLDAAPTSSTTLTLALGDALAVCLMEKRGFKKEDFANFHPGGSLGKRLFLKVKDVMRS- 204

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLS 284
           +++P+V+    L  AI  ++  + G V +VD+   L  I+++GD+ R   +   DLN  +
Sbjct: 205 ENLPIVRWNASLKQAIDTMTHGKLGTVLIVDKDGVLDAILSDGDLRRALMREDFDLNDAA 264

Query: 285 VEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++   +K PK + +  +L + A+ L+ ++ I +L VV++    +G++H  DL   G+
Sbjct: 265 IKYATLK-PKELNDKEMLAIDALALIERYKIQLLAVVENGV-PVGVLHIHDLANLGL 319


>gi|152989815|ref|YP_001355537.1| arabinose-5-phosphate isomerase [Nitratiruptor sp. SB155-2]
 gi|151421676|dbj|BAF69180.1| arabinose-5-phosphate isomerase [Nitratiruptor sp. SB155-2]
          Length = 319

 Score =  225 bits (573), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 194/292 (66%), Gaps = 12/292 (4%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVE I  IKG++++TG+GKSG +GSK+A+T ASTGTPSFF+H  EA HGDLGMI ++D +
Sbjct: 32  AVELIYNIKGKLIVTGVGKSGLVGSKIAATFASTGTPSFFIHPTEALHGDLGMIGKEDGV 91

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           + +S+SG S+EL  IL + +RF IPLI ++S   S +  ++D+ +++  E E+CP   AP
Sbjct: 92  LAISYSGESEELIKILPHIKRFDIPLIGMSSNPDSSLGRYSDVFISIAVEKEACPLQAAP 151

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
           T S  + +A+GDALA+ L++ RNF   DF   HPGG LG  L+V   D+M +  ++P++ 
Sbjct: 152 TASTTLTMALGDALAVCLMKKRNFQVKDFASFHPGGSLGRRLYVKVKDLMRT-QNLPIIN 210

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSVEDVM 289
              PL +AI ++SE + G V + +   KL G++++GD+ R     NF   L+T ++E   
Sbjct: 211 EETPLKEAIVVMSEGKLGNVLIKNGEGKLVGVLSDGDLRRALMSQNF--SLDTPAIE-YA 267

Query: 290 IKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            K+PK+I ++ +L + A++L+ ++ I +L++V +     G++H  DL+  GI
Sbjct: 268 TKSPKMIDDENMLASDALKLIEEYKIQMLVIVKNGHIE-GVLHIHDLVEAGI 318


>gi|295675420|ref|YP_003603944.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1002]
 gi|295435263|gb|ADG14433.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1002]
          Length = 327

 Score =  225 bits (573), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 185/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGHI  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGSFVGAVDFILGCRGRVVVSGIGKSGHIARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ + LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTADDVFLALSNSGETEELMAILPLIKRIGAKLIAMTGRPGSSLAQLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VAKEACPMNLAPTASTTAALALGDALAVAVLDARGFGRDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  +VVD   ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDQLPQVTPEATVSDALFQLTAKRMGMTSVVDHEGRVTGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L +  VM   P+ I  D L   A++L+ ++ I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RQLPIGSVMTAGPRTIGPDQLAVEAVELMERYRINQMLVVDESGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|326796608|ref|YP_004314428.1| KpsF/GutQ family protein [Marinomonas mediterranea MMB-1]
 gi|326547372|gb|ADZ92592.1| KpsF/GutQ family protein [Marinomonas mediterranea MMB-1]
          Length = 325

 Score =  225 bits (573), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/321 (40%), Positives = 193/321 (60%), Gaps = 10/321 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L  ++ +Q A  ++  +   L+ L   L  E    F  AV+ I A  GRV++ G+GKSG 
Sbjct: 10  LSDDAILQSARTTLDTQANALTGLSQRLSNE----FSQAVKMILATSGRVIVCGMGKSGL 65

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTPSFF+H  EA HGDLGMI ++DL++++S+SG ++E+  +L     F
Sbjct: 66  IGKKIAATLASTGTPSFFLHPGEAFHGDLGMIQKEDLVLLISYSGETEEVIRLLPSLSNF 125

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             PLIAI     S +A H+   L +  + E+CP+ LAPTTS  +  AIGDALA+AL+E R
Sbjct: 126 GNPLIAIAGNPSSTLATHSQCFLNIAVDREACPNNLAPTTSTTLTAAIGDALAVALMECR 185

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F   DF   HPGG LG  L     D+MH  D++P      PL DAI++++  R G V +
Sbjct: 186 DFQPQDFARFHPGGSLGRKLLTRVKDLMHK-DNLPTCAPSMPLSDAISVMTTGRMGVVLI 244

Query: 257 VDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            DE +++ GI T+GD+ R       D+ + S+ ++M  NPK I E  ++  A + +    
Sbjct: 245 EDE-KRIVGIFTDGDLRRALLTKGGDIMSKSMAELMTANPKTIHESVMIVEAEERMINEK 303

Query: 314 ISVLMVVDDCQKAIGIVHFLD 334
           I++L+VVDD    +G++   D
Sbjct: 304 ITLLVVVDDSDSVVGLLEIYD 324


>gi|323491747|ref|ZP_08096924.1| arabinose 5-phosphate isomerase [Vibrio brasiliensis LMG 20546]
 gi|323314003|gb|EGA67090.1| arabinose 5-phosphate isomerase [Vibrio brasiliensis LMG 20546]
          Length = 321

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 199/320 (62%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+  +  +    F  A E I A K G+VV+ G+GKSGHIG+K+A+
Sbjct: 7   AALEVLQTEVEALKQLDQYINDD----FINACELILANKDGKVVVMGMGKSGHIGNKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH  EA+HGDLGMI   D+++ +S SG S E+  +    +R +I +I++
Sbjct: 63  TLASTGTSSFFVHPGEAAHGDLGMIEPGDVVLAISNSGESSEILGLFPVLKRLNIKIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + KS +A  +DI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF
Sbjct: 123 TGKPKSNMAKLSDIHLQITVPKEACPIQLAPTSSTTATLVMGDALAMALMQARGFTAEDF 182

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MH+GDS+PLV     + DA+  +S+K  G  AVVD+ Q+L
Sbjct: 183 AMSHPGGALGRKLLLKLADIMHTGDSLPLVTPSTVVRDALLEISQKGLGMTAVVDDHQQL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T  + DVM  NP     + L    + L++  +I+ L++ +
Sbjct: 243 IGIFTDGDLRRILDKRIDIHTALIGDVMTVNPTTAEPNMLAAEGLNLMQDKSINGLVLCE 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K +G ++  DLL+ G++
Sbjct: 303 EG-KVVGALNMHDLLKAGVM 321


>gi|300870475|ref|YP_003785346.1| polysialic acid capsule expression protein [Brachyspira pilosicoli
           95/1000]
 gi|300688174|gb|ADK30845.1| polysialic acid capsule expression protein [Brachyspira pilosicoli
           95/1000]
          Length = 323

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/294 (42%), Positives = 180/294 (61%), Gaps = 10/294 (3%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV ++  IKGRV+ +G+GKSGHI  K AST ASTGTPSFFV   E  HGD GMIT+
Sbjct: 28  NFEKAVNELFNIKGRVITSGVGKSGHIARKAASTFASTGTPSFFVDPNECLHGDFGMITK 87

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D +++ S  G S E+  ++ ++ R +IP IAIT++  S ++ +A I L    + E+CP 
Sbjct: 88  NDYLVLYSKGGESREIIELVNWSCRQNIPYIAITNDEFSTLSKNAKITLLTHVKEEACPL 147

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            LAPT S    LA+ DALA AL+E R F   DF + HPGG LG        +MH+ D++P
Sbjct: 148 KLAPTVSTTASLALSDALATALMELRGFKAEDFAIFHPGGSLGRQLAKVKTIMHT-DNLP 206

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVE 286
           ++ +   L DA+  + E + G   + D+   LKGII +GD+ R   KD        + V+
Sbjct: 207 IINLETSLYDALFKIIECKLGIAIITDDNGILKGIIVDGDLKRLLVKDKQIENILKIKVK 266

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIVHFLDLLR 337
           D+M  NPKVI +DTL+  A+ L+ +  I+ L+VV+D    +K IGIVH  D+L+
Sbjct: 267 DIMNNNPKVIYQDTLIGEALHLM-EGKITNLVVVEDTKDGKKPIGIVHIHDILK 319


>gi|115372698|ref|ZP_01460005.1| KpsF/GutQ [Stigmatella aurantiaca DW4/3-1]
 gi|310823817|ref|YP_003956175.1| gutq protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370419|gb|EAU69347.1| KpsF/GutQ [Stigmatella aurantiaca DW4/3-1]
 gi|309396889|gb|ADO74348.1| GutQ protein [Stigmatella aurantiaca DW4/3-1]
          Length = 353

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 181/296 (61%), Gaps = 4/296 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L G L   F  AV  ++   G+ V+TG+GK+G IG KL++TLASTG  SF++H AEA HG
Sbjct: 53  LTGRLGDPFLRAVALLRQCPGQAVVTGMGKAGLIGQKLSATLASTGIRSFYLHPAEAVHG 112

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG + R D+I+ LS SG+++EL  +L   RR   P+IA+T E  S +A  +D+VL L +
Sbjct: 113 DLGRVGRGDVILALSNSGATEELLRLLPSFRRLETPVIALTGEADSPLARGSDVVLDLGR 172

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+CP GL PTTS     A+GDAL + L+ SR+F+   +  LHPGGK+G      +DVM
Sbjct: 173 LEEACPMGLVPTTSTAALHAMGDALVMTLMRSRSFTTEQYAQLHPGGKIGRSVQRVADVM 232

Query: 225 HSGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
            +G + P+VK    L DA+ ++++   R G  +VVD   KL GI T+GD+ R   +    
Sbjct: 233 RTGPANPVVKETAKLSDAVGVMTQTPGRPGATSVVDRQGKLVGIFTDGDLRRMVEQGRTD 292

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            T+ + DVM + P+ +  +TL+  A   +R+  +  L VVD   +A+G++   DLL
Sbjct: 293 FTVPMRDVMGRRPRCVSPETLVLTAAAQMRESRVDQLPVVDAEGRAVGLLDVQDLL 348


>gi|117926614|ref|YP_867231.1| KpsF/GutQ family protein [Magnetococcus sp. MC-1]
 gi|117610370|gb|ABK45825.1| KpsF/GutQ family protein [Magnetococcus sp. MC-1]
          Length = 326

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 138/321 (42%), Positives = 195/321 (60%), Gaps = 9/321 (2%)

Query: 29  RSIIAEKRGLSSLES----SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           R ++A  R    LE+    +++  L+  F  AV++I A  GRVV+TG+GKSG IG K+A+
Sbjct: 7   RDMLARARQTLELEAEAILAMRERLNGDFVQAVQQILACTGRVVVTGMGKSGIIGHKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTP+ ++H  E  HGDLGM+T  D +I LS SG + E+ A+L   +R   PLIAI
Sbjct: 67  TLSSTGTPALYLHPGEGIHGDLGMLTAQDCVIALSNSGETAEVLALLPVIKRLGTPLIAI 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +A  +D+ L      E+CP  LAPT+S    LA+GDALA+ALLE+R FSE+ F
Sbjct: 127 LGRMASTLARQSDVALDASVAREACPLNLAPTSSTTAALALGDALAVALLEARGFSEDQF 186

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +   D+MH G ++P V     + DA+  ++ KR G  AV++E  +L
Sbjct: 187 ALFHPGGALGRKLLLKVEDLMHHGAALPQVARHTLVKDALWEMTAKRLGLTAVLEEDGRL 246

Query: 264 KGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GIIT+GD+ R       DL  L  E +M  NPK I  D L   A+  +    I+ L+VV
Sbjct: 247 AGIITDGDLRRQLEDHPGDLLNLRAEQIMTVNPKAIQPDALAAQAVHDMETRAITALLVV 306

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
            D Q+ +G++H  DLLR G++
Sbjct: 307 -DAQQLVGVIHLHDLLRAGVV 326


>gi|258622784|ref|ZP_05717802.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM573]
 gi|258584972|gb|EEW09703.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM573]
          Length = 274

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/274 (44%), Positives = 178/274 (64%), Gaps = 4/274 (1%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+
Sbjct: 2   GMGKSGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILAL 61

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R +I +I++T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA
Sbjct: 62  LPVLKRLNIRVISMTGNPSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALA 121

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +AL+++R F+  DF + HPGG LG  L +  +D+MHSG+++P V     + DA+  +S+K
Sbjct: 122 VALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQK 181

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G  AVVDE   L GI T+GD+ R   K  D++T ++ DVM + P V   + L    + 
Sbjct: 182 GLGMTAVVDEQDTLLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGLN 241

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L++   I+ LM+VDD  K +G ++  DLL+ G++
Sbjct: 242 LMQAKRINGLMLVDD-NKLVGALNMHDLLKAGVM 274


>gi|194335585|ref|YP_002017379.1| KpsF/GutQ family protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308062|gb|ACF42762.1| KpsF/GutQ family protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 326

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 120/296 (40%), Positives = 182/296 (61%), Gaps = 3/296 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AVE + + +G+++I+G+GKSG I  K+A+T++STG+ + F+H A+A+HGDLG
Sbjct: 31  RLDESFSAAVELLASCQGKIIISGMGKSGIIAQKIAATMSSTGSTALFLHPADAAHGDLG 90

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++   D +I LS SG+++EL  I+   R+    +IA+T   +S +A  ADI L      E
Sbjct: 91  IVGHTDTVICLSKSGTTEELNFIIPALRQIGAKIIAMTGNPRSFLAQKADITLDTGIAKE 150

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP+ LAPTTS    LA+GDALAIAL++ +NF++ DF + HP G LG  L V  SD+M  
Sbjct: 151 ACPYDLAPTTSTTAMLAMGDALAIALMQVKNFTQRDFALTHPKGSLGRRLTVKVSDIMAK 210

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLS 284
           GD++P+V     +   I  ++ KR+G  AV+ +  KL GI T+GD+ R     ++   LS
Sbjct: 211 GDAVPIVSESASVTGLILEMTSKRYGVSAVITDDGKLCGIFTDGDLRRLVQSGREFLNLS 270

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              VM  NPK +  DT+    + +L    I+ L+V DD Q  +G+VH  DL+  G+
Sbjct: 271 AGSVMTANPKTVTGDTMAKECLDILETWRITQLLVCDDEQHPVGMVHIHDLIVLGL 326


>gi|330818336|ref|YP_004362041.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia gladioli
           BSR3]
 gi|327370729|gb|AEA62085.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia gladioli
           BSR3]
          Length = 327

 Score =  224 bits (572), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 132/301 (43%), Positives = 187/301 (62%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGGFVGAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S SG S+EL AIL   +R    LIA+T   +S +A  +D+ L   
Sbjct: 87  GDLGMVTADDVFIAISNSGESEELVAILPLIKRLGAKLIAMTGRPQSSLAQLSDVHLYAG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+C   LAPT S    LA+GDALA+ +L++R F  NDF   HPGG LG  L     D
Sbjct: 147 VEKEACSLNLAPTASTTAALALGDALAVVVLDARGFGPNDFARSHPGGSLGRRLLTHVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P+V++   L DA+  ++ KR G   V+DE  ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDEVPIVRLTATLSDALFQITAKRMGMTVVIDEQDRVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + DVM ++P+ I  D L   A++L+ ++ I+ ++V D     IG ++  DL    +
Sbjct: 267 RHLPIADVMTRHPRSIAPDHLAVEAVELMERYRINQMLVTDADGVLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|324005456|gb|EGB74675.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 57-2]
          Length = 327

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 186/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S++A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSMLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|315179029|gb|ADT85943.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio furnissii NCTC 11218]
          Length = 324

 Score =  224 bits (571), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 179/280 (63%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ GIGKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI   D+++ +S SG S
Sbjct: 46  GKVVVMGIGKSGHIGRKIAATLASTGTSAFFVHPGEASHGDLGMIESGDIVLAISNSGES 105

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A+    +R +  +I++T    S +A  ADI L +    E+CP GLAPT+S    L 
Sbjct: 106 SEILALFPVLKRLNNRIISMTGNPHSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLV 165

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R F+  DF + HPGG LG  L +   D+MHSG+ +P V     + DA+
Sbjct: 166 MGDALAVALLQARGFTAEDFALSHPGGALGRKLLMKLHDIMHSGEELPKVSPDALVRDAL 225

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +S+K  G  AVV E   L GI T+GD+ R   K  D++T S+ DVM  NP V   + L
Sbjct: 226 LEISQKGLGMTAVVAEDDHLLGIFTDGDLRRILDKRIDIHTASIRDVMTCNPTVASPNIL 285

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L+++  I+ LM+V+D  K +G ++  DLL+ G++
Sbjct: 286 AVEGLNLMQEKRINGLMLVEDG-KLVGALNMHDLLKAGVM 324


>gi|289523513|ref|ZP_06440367.1| arabinose 5-phosphate isomerase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503205|gb|EFD24369.1| arabinose 5-phosphate isomerase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 339

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/327 (41%), Positives = 191/327 (58%), Gaps = 20/327 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGEL----SFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++   R +  E + L++  S L  E+       F C        KGRVV+ G+GKSG I 
Sbjct: 22  LEVGRRVLKQEAKELANASSRLGREIIEAAKLIFDC--------KGRVVVCGLGKSGIIA 73

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T AS GTPS F+HA E  HGDLGM+ R D+ I LS SG ++E+  ++ Y +RF I
Sbjct: 74  KKIAATFASLGTPSIFLHATEGVHGDLGMVCRGDVGIFLSNSGQTNEVLEVVPYFKRFGI 133

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAIT    S +   AD+V+    E E+ P GLAPT+SA++QLAIGDALA+ + + R  
Sbjct: 134 PIIAITGNVSSRLGKEADLVIDASVEREADPLGLAPTSSAVVQLAIGDALAVMVADLRKL 193

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF + HPGG LG  L +   DVM S D +P V     + +A+  ++ K +G   VVD
Sbjct: 194 KREDFALFHPGGSLGKKLLLKVRDVMGSEDKLPSVSHRATVREALFEITSKGYGATVVVD 253

Query: 259 EGQKLKGIITEGDIFRNFHKDLN-----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +  KLKGI T+GD+ R   +D       +L + +VM KNPK I  D L    + L+ +H 
Sbjct: 254 DEGKLKGIFTDGDL-RRLIEDRGEVGVLSLPIAEVMTKNPKTIDADELAAKGVLLMEKHE 312

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +SVL+V  D    IG+VH  D+L+ G+
Sbjct: 313 VSVLVVEKDGL-PIGMVHLHDMLKAGV 338


>gi|301156064|emb|CBW15535.1| D-arabinose 5-phosphate isomerase [Haemophilus parainfluenzae T3T1]
          Length = 311

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/314 (42%), Positives = 192/314 (61%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E + L  L   L  E    F   V+ I A +GR+VI GIGKSG IG K+ 
Sbjct: 4   LQIARETLSVESQALKQLSQRLDDE----FSQVVDLILACEGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +R+F   D
Sbjct: 120 LTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARHFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+        D +TI++E R G VA+V E Q+
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--RLPITTPDTSFTDCLTIMNEGRMG-VALVMENQQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GD+ R    N    LN  + +++M  +PK I E+  L  A  L+++  I  L+
Sbjct: 237 LKGIITDGDVRRALTANGADTLNK-TAKELMTSSPKTIHENEFLAKAEDLMKEKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENNVVGLVEF 309


>gi|313892382|ref|ZP_07825974.1| arabinose 5-phosphate isomerase [Dialister microaerophilus UPII
           345-E]
 gi|313119241|gb|EFR42441.1| arabinose 5-phosphate isomerase [Dialister microaerophilus UPII
           345-E]
          Length = 323

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/299 (40%), Positives = 183/299 (61%), Gaps = 6/299 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F    E I  IKGRV++TG+GKSG I  K+ASTLASTGTP+FF+H  EA HGDLG 
Sbjct: 25  LDKHFKKVAELILNIKGRVILTGMGKSGQIAGKIASTLASTGTPAFFLHPGEAIHGDLGK 84

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           IT  D++ +LS SG ++E+  ++    +    +I +T    S +A  AD+VL +  + E+
Sbjct: 85  ITSYDIVFMLSNSGETEEIINLIPSIEKIGATVIVMTGCKNSTLAQKADVVLPVVIKKEA 144

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
               + PT+S+   LAIGDALAI L++ ++F+   F + HPGG LG  + +    +MHSG
Sbjct: 145 DEFNMVPTSSSTTMLAIGDALAITLMKLKSFTSERFALYHPGGTLGKKMLMTVKQIMHSG 204

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
              P VK    + +A+ +++ K  G V+++DE  KLKGI+T+GDI R    H D     V
Sbjct: 205 KGNPTVKPTLTVQEALFVMTAKGLGAVSIIDEEGKLKGILTDGDIRRGLEKHADFLKFEV 264

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLRFGII 341
           +DVMIKNP ++    LL  A++L++ H  + + V+  C+K     G++H  DLL+ G++
Sbjct: 265 KDVMIKNPIIVHPSQLLVNALELMKSHKPNPVTVLPVCEKDGYVCGMIHLTDLLKQGVL 323


>gi|261250140|ref|ZP_05942716.1| arabinose 5-phosphate isomerase [Vibrio orientalis CIP 102891]
 gi|260939256|gb|EEX95242.1| arabinose 5-phosphate isomerase [Vibrio orientalis CIP 102891]
          Length = 321

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 198/320 (61%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+  L  +    F  A E I A K G+VV+ G+GKSGHIG+K+A+
Sbjct: 7   AALEVLETEIEALEQLDQYLNQD----FVAACESIIANKDGKVVVMGMGKSGHIGNKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH  EA+HGDLGMI   D+++ +S SG S E+ A+    +R +I +I++
Sbjct: 63  TLASTGTSSFFVHPGEAAHGDLGMIDPGDIVLAISNSGESGEILALFPVLKRLNIKIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  +DI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF
Sbjct: 123 TGKPNSNMAKLSDIHLQITVPKEACPIQLAPTSSTTATLVMGDALAMALMQARGFTSEDF 182

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  +D+MH+G ++PLV     + DA+  +S+K  G  AVVD+ Q+L
Sbjct: 183 ALSHPGGALGRKLLLKLADIMHTGSALPLVTPTTVVRDALLEISQKGLGMTAVVDDHQQL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D+++  + DVM  NP V   + L    + L++  +I+ L++ D
Sbjct: 243 VGIFTDGDLRRILDKRIDIHSALIGDVMTVNPTVAEPNMLAAEGLNLMQDKSINGLILCD 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  DLL+ G++
Sbjct: 303 QG-KVVGALNMHDLLKAGVM 321


>gi|258404460|ref|YP_003197202.1| KpsF/GutQ family protein [Desulfohalobium retbaense DSM 5692]
 gi|257796687|gb|ACV67624.1| KpsF/GutQ family protein [Desulfohalobium retbaense DSM 5692]
          Length = 340

 Score =  224 bits (571), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/310 (42%), Positives = 188/310 (60%), Gaps = 10/310 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL ++ +SL GE    F  AVE +   +GRVV+TG+GKSG +G K+A+TL+STGTP+
Sbjct: 32  EIEGLQAIRASL-GE---SFVEAVEVLAGCRGRVVVTGLGKSGLVGRKIAATLSSTGTPA 87

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +F+H  E +HGD+G+I + D+++ LS SG +DEL AIL   R     LIA+TS+  S +A
Sbjct: 88  YFLHPVEGAHGDMGLIRKGDVVLALSNSGETDELNAILPTLRSLGARLIALTSDPDSRMA 147

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+VL      E+CP GLAPT S    LA+GDALA+ LL  R+F   DF   HPGG L
Sbjct: 148 RESDVVLQTRVPREACPLGLAPTASTTAALAMGDALAVCLLTHRSFDSQDFKRYHPGGSL 207

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L  C  D+MH+   +PLV  G  L  A+ +L+    G V VVD+  +L G++T+GD+
Sbjct: 208 GRRLRQCLKDLMHT-VQVPLVMEGVSLQQALEVLNSGGLGTVVVVDQEHRLAGVLTDGDV 266

Query: 273 FRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R   +   D+  + VE +M   P  +  +     A+ +L Q  I+VL VVD  ++  GI
Sbjct: 267 RRLVCRGGLDV-AVPVETLMTVRPSAVHPEQSAAEALDILEQKAITVLPVVDAERRLQGI 325

Query: 330 VHFLDLLRFG 339
           +H  DLL  G
Sbjct: 326 IHLHDLLGKG 335


>gi|70608394|gb|AAZ04466.1| polysialic capsule transport protein [Escherichia coli]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|319945409|ref|ZP_08019669.1| arabinose 5-phosphate isomerase [Lautropia mirabilis ATCC 51599]
 gi|319741195|gb|EFV93622.1| arabinose 5-phosphate isomerase [Lautropia mirabilis ATCC 51599]
          Length = 332

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/296 (44%), Positives = 184/296 (62%), Gaps = 4/296 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  L   F  A  ++ A +GRV+++G+GKSGHI  K+A+TLASTGTP+FFVH AEASHG
Sbjct: 32  LRDTLDEGFCRACRQVLACQGRVIVSGMGKSGHIARKIAATLASTGTPAFFVHPAEASHG 91

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T  D+ I LS SG +DEL  I+   +R    LIA+T + +S +A +ADI L    
Sbjct: 92  DLGMVTAQDVFIALSNSGRTDELMTIVPQVKRVGAALIALTGDAESPLAQYADIHLYAGA 151

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP  LAPT S    LA+GDALA+ALLE+R F   DF   HPGG LG  L    SD+
Sbjct: 152 QKEACPLNLAPTASTTAALALGDALAVALLEARGFGSEDFARSHPGGALGRRLLTHVSDI 211

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDL 280
           M  GD +P  +      DA+  +S KR G VAV+D+  ++ GI T+GD+ R F     DL
Sbjct: 212 MRQGDELPTCRPQTLFTDALLEISHKRMGMVAVLDDENRVAGIFTDGDLRRVFSGSQPDL 271

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L++ +VM  NP  I  + L   A++++    I+ ++V D  +  +G +HF DLL
Sbjct: 272 TRLTIGEVMTANPITIGAEALAVEAVRIMESRRITQILVTDRQRHLVGALHFHDLL 327


>gi|194333248|ref|YP_002015108.1| KpsF/GutQ family protein [Prosthecochloris aestuarii DSM 271]
 gi|194311066|gb|ACF45461.1| KpsF/GutQ family protein [Prosthecochloris aestuarii DSM 271]
          Length = 323

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 123/300 (41%), Positives = 186/300 (62%), Gaps = 3/300 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++ G L   F  AV  +   KG+V+++G+GKSG IG K+A+TLASTGT + F+H A+A+H
Sbjct: 24  NIAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQKIAATLASTGTTALFMHPADAAH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++   D++I LS SG ++EL  IL       + +IAI    +S +A  A+IVL + 
Sbjct: 84  GDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVTIIAIVGNPRSFLAEKANIVLDVS 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPTTS    LA+GDALAI+L+  + F+ NDF + HP G LG  L +  +D
Sbjct: 144 VCQEACPFDLAPTTSTTAMLAMGDALAISLMREKQFTPNDFALTHPKGSLGKQLTMKVAD 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           +M SG ++PLV     + D I  ++ KRFG   V +   KL GI T+GD+ R   +  D 
Sbjct: 204 LMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNRDGKLSGIFTDGDLRRLIQRGVDF 263

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++LS  DVM  +PK +  + L   ++++L  + I+ LMV D+ ++ +GI+H  DL+  G+
Sbjct: 264 SSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQLMVCDNDERPVGIIHIHDLVTQGL 323


>gi|260062260|ref|YP_003195340.1| capsule expression protein KpsF/GutQ [Robiginitalea biformata
           HTCC2501]
 gi|88783822|gb|EAR14993.1| capsule expression protein KpsF/GutQ [Robiginitalea biformata
           HTCC2501]
          Length = 321

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 196/328 (59%), Gaps = 12/328 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MK+S   ++ A ++I  E   +  L + L  + S    C +E      GRVVITGIGKS 
Sbjct: 1   MKDSKAILEIARQTIALEGDAIHHLATLLTEDFSRAVSCILEA----DGRVVITGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I SK+ +TL STGTP+ ++HAA+A HGDLG I ++D++I +S SG++ E+K ++   ++
Sbjct: 57  IIASKIVATLNSTGTPAIYMHAADAIHGDLGTIQQNDVVICISKSGNTPEIKLLVPLIKQ 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              PLI +T    S +   AD  L    E E+CP+ LAPTTS   QL +GDALAI LLE 
Sbjct: 117 GGNPLIGMTGSPDSFLGRRADYCLNTYVEKEACPNNLAPTTSTTAQLVLGDALAICLLEL 176

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R FS  DF   HPGG LG  L++   D+  + + +P V    P+ DAI  +SEK  G  A
Sbjct: 177 RGFSSRDFARYHPGGTLGKKLYLRVGDIA-AQNQVPQVSGDTPVKDAIVEISEKMLGVTA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+D G ++ GIIT+GDI R  N H ++  L   D+M   PK +  + L   A+Q++ +++
Sbjct: 236 VMD-GDRVAGIITDGDIRRMLNKHDNIAGLRARDIMTTGPKTVDSEVLAVKALQMMEEND 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           IS L+   D  + IG+VH  +L++ GI+
Sbjct: 295 ISQLLATRD-GRYIGVVHIHNLIKEGIL 321


>gi|260770983|ref|ZP_05879912.1| arabinose 5-phosphate isomerase [Vibrio furnissii CIP 102972]
 gi|260614220|gb|EEX39410.1| arabinose 5-phosphate isomerase [Vibrio furnissii CIP 102972]
          Length = 324

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/280 (45%), Positives = 179/280 (63%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ GIGKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI   D+++ +S SG S
Sbjct: 46  GKVVVMGIGKSGHIGRKIAATLASTGTSAFFVHPGEASHGDLGMIESGDIVLAISNSGES 105

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A+    +R +  +I++T    S +A  ADI L +    E+CP GLAPT+S    L 
Sbjct: 106 SEILALFPVLKRLNNRIISMTGNLHSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLV 165

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R F+  DF + HPGG LG  L +   D+MHSG+ +P V     + DA+
Sbjct: 166 MGDALAVALLQARGFTAEDFALSHPGGALGRKLLMKLHDIMHSGEELPKVSPDALVRDAL 225

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +S+K  G  AVV E   L GI T+GD+ R   K  D++T S+ DVM  NP V   + L
Sbjct: 226 LEISQKGLGMTAVVAEDDHLLGIFTDGDLRRILDKRIDIHTASIRDVMTCNPTVASPNIL 285

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L+++  I+ LM+V+D  K +G ++  DLL+ G++
Sbjct: 286 AVEGLNLMQEKRINGLMLVEDG-KLVGALNMHDLLKAGVM 324


>gi|332521095|ref|ZP_08397553.1| KpsF/GutQ family protein [Lacinutrix algicola 5H-3-7-4]
 gi|332043188|gb|EGI79385.1| KpsF/GutQ family protein [Lacinutrix algicola 5H-3-7-4]
          Length = 321

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/324 (41%), Positives = 189/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K S ++ A  +I  E   +++L S +  +    F  AVE I   KGRV+ITGIGKS  I 
Sbjct: 4   KESIIKLAKETITLESESINNLISLIDND----FADAVELIYNSKGRVIITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +TL STGTP+ F+HAA+A HGDLG+I  DD++I +S SG++ E+K ++   +    
Sbjct: 60  TKIVATLNSTGTPAVFMHAADAIHGDLGLILEDDVVICISKSGNTPEIKVLVPLIKNAKN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IAIT    S +   AD VL    + E+CP+ LAPTTS   QL IGDALA+ LLE R F
Sbjct: 120 KMIAITGNKTSFLGQQADYVLNAFVQKEACPNNLAPTTSTTAQLVIGDALAVCLLELRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG         + S +S P V     +   I  +SE   G  AVV E
Sbjct: 180 SSKDFAKYHPGGALGKKLYLRVQDLSSVNSKPQVAPDTNVKQVIIQISESMLGVTAVV-E 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + GIIT+GD+ R   K  D + L+ +D+M  NPK I ED +   AM+++  + IS L
Sbjct: 239 NNNIVGIITDGDLRRMLTKVDDFSKLTAKDIMSNNPKRIAEDAMAVDAMEIMESNGISQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V  D + A G+VH  +L++ GI+
Sbjct: 299 LVEHDGKYA-GVVHIHNLIKEGIL 321


>gi|294493943|gb|ADE92699.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           IHE3034]
 gi|315288737|gb|EFU48135.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 110-3]
 gi|323957572|gb|EGB53287.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|194436836|ref|ZP_03068936.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           101-1]
 gi|194424318|gb|EDX40305.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           101-1]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNENSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|152979329|ref|YP_001344958.1| KpsF/GutQ family protein [Actinobacillus succinogenes 130Z]
 gi|150841052|gb|ABR75023.1| KpsF/GutQ family protein [Actinobacillus succinogenes 130Z]
          Length = 311

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/313 (40%), Positives = 193/313 (61%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E++ L+ L  +L    +  F   +E I   +GR+ ++G+GKSG IG K+ 
Sbjct: 4   LQNARETLAIEEQALAKLSRNL----NRTFDAVIELIIGCEGRIAVSGVGKSGLIGKKIV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ++LASTGTPSFF+H  EA HGDLGM+   D++I++S+SG SDE+  ++   + F   ++A
Sbjct: 60  ASLASTGTPSFFLHPTEAFHGDLGMLKPSDVVILISYSGESDEVNKLIPSLKNFGNKIVA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +  HAD +L +  E E+CP+ LAPTTSA++ LA+GDAL +AL+ +RNF   D
Sbjct: 120 LTSNPTSTLGKHADFILDITVEREACPNNLAPTTSALVTLALGDALTVALIHARNFKPID 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+V       D +T+++E R G VA+V E Q 
Sbjct: 180 FAKFHPGGSLGRRLLCRVKDQMQT--RLPVVAENTGFTDCLTVMNEGRMG-VALVMERQT 236

Query: 263 LKGIITEGDIFRNFHKD-LNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           LKGIIT+GDI R    +   TL  S  D+M   PK I ++  L+ A   +++  I  L+V
Sbjct: 237 LKGIITDGDIRRALTANGAETLHKSARDLMTGTPKTINQNEFLSAAESFMKEKKIHSLVV 296

Query: 320 VDDCQKAIGIVHF 332
           V+D  + +G+V F
Sbjct: 297 VNDDNQVVGLVEF 309


>gi|146329517|ref|YP_001209446.1| arabinose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
 gi|146232987|gb|ABQ13965.1| arabinose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
          Length = 320

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/296 (42%), Positives = 185/296 (62%), Gaps = 4/296 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L+  F  A E +   +G V+++G+GKSGHI +KLA+T ASTGTP+FFVH +EA HGDLG
Sbjct: 25  RLTDDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGHGDLG 84

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MIT  D +++LS+SG S EL A+L   +  ++P+IA+T   +S +A +ADI + +  E E
Sbjct: 85  MITAADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIERE 144

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S    LA+GDALAI+L+++R+F++ DF   HP G+LG  L +  +D+M  
Sbjct: 145 ACPLNLAPTASTTAMLAVGDALAISLMQARDFNDEDFARSHPFGRLGRRLTIKVADIMRP 204

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LS 284
              +PL      +  A+  +++KR G   +  E +KL GI T+GD+ R      N   L 
Sbjct: 205 FAQLPLNLPTDSVQTALFQITDKRLGMTLIAQE-KKLLGIYTDGDLRRTLGAFSNALHLP 263

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +E VM KNPK I E  L   A+ L++Q  I+VL V+   Q+  G VH  DL+  G+
Sbjct: 264 LEHVMTKNPKTITEHCLAAEALHLMQQQQITVLPVLTIEQQLCGAVHIHDLIAAGV 319


>gi|117625246|ref|YP_854329.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           APEC O1]
 gi|115514370|gb|ABJ02445.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           APEC O1]
          Length = 339

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|91212354|ref|YP_542340.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           UTI89]
 gi|218560016|ref|YP_002392929.1| Polysialic acid capsule expression protein [Escherichia coli S88]
 gi|237706313|ref|ZP_04536794.1| polysialic acid capsule synthesis protein KpsF [Escherichia sp.
           3_2_53FAA]
 gi|91073928|gb|ABE08809.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           UTI89]
 gi|218366785|emb|CAR04553.2| Polysialic acid capsule expression protein [Escherichia coli S88]
 gi|226899353|gb|EEH85612.1| polysialic acid capsule synthesis protein KpsF [Escherichia sp.
           3_2_53FAA]
 gi|307625457|gb|ADN69761.1| Polysialic acid capsule expression protein [Escherichia coli UM146]
          Length = 339

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|227887642|ref|ZP_04005447.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|293406558|ref|ZP_06650484.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1412]
 gi|298382298|ref|ZP_06991895.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1302]
 gi|300900269|ref|ZP_07118448.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 198-1]
 gi|300973543|ref|ZP_07172257.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|301019378|ref|ZP_07183560.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 196-1]
 gi|7387830|sp|Q47334|KPSF5_ECOLX RecName: Full=Polysialic acid capsule expression protein kpsF
 gi|1212889|emb|CAA64561.1| kpsF [Escherichia coli]
 gi|47600692|emb|CAE55814.1| KpsF protein [Escherichia coli Nissle 1917]
 gi|227835038|gb|EEJ45504.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|291426564|gb|EFE99596.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1412]
 gi|298277438|gb|EFI18954.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1302]
 gi|299882251|gb|EFI90462.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 196-1]
 gi|300356159|gb|EFJ72029.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 198-1]
 gi|300410759|gb|EFJ94297.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|307555033|gb|ADN47808.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           ABU 83972]
 gi|315291285|gb|EFU50645.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 153-1]
          Length = 327

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|300313255|ref|YP_003777347.1| sugar phosphate isomerase [Herbaspirillum seropedicae SmR1]
 gi|124483562|emb|CAM32654.1| Sugar phosphate isomerase (involved in capsule formation) protein
           [Herbaspirillum seropedicae]
 gi|300076040|gb|ADJ65439.1| sugar phosphate isomerase (involved in capsule formation) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 342

 Score =  224 bits (570), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/321 (39%), Positives = 188/321 (58%), Gaps = 3/321 (0%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A +++  E   + +L++ L  + S     AV  +    GR V++GIGKSGHIG K+A
Sbjct: 22  IELARQTLQIEADAILALKNRLGDDASEPLAQAVHLLLQCNGRAVVSGIGKSGHIGRKIA 81

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTPS F+H AEA+HGDLGM+T +D+ I +S SG + EL AI+   +R    +IA
Sbjct: 82  ATLASTGTPSLFMHPAEAAHGDLGMVTPNDVFIAISNSGETGELMAIMPIVKRMGAVIIA 141

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T  + S +A  A++ L +  + E+C   LAPT S    LA+GDALA++LL++R F E D
Sbjct: 142 MTGNDNSSLARMANVHLNVGVDKEACTLNLAPTASTTATLAMGDALAVSLLDARGFLEED 201

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L     DVM SGD+IP V     L  A+  ++ K     AVVD   +
Sbjct: 202 FARSHPGGALGRRLLTHVRDVMRSGDAIPAVSPDVSLSQALMEITRKGMAMTAVVDADFR 261

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             G+ T+GD+ R   +  D +   + ++M  NP+ + +D L   A+QL+ +  I+ L+V 
Sbjct: 262 PIGVFTDGDLRRLLERGQDFSQFRIAEIMHANPRTVNQDQLAVDAVQLMEEFRINQLLVT 321

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D      G +H  DL R  +I
Sbjct: 322 DAQGVLTGALHIHDLTRAKVI 342


>gi|91781729|ref|YP_556935.1| KpsF/GutQ [Burkholderia xenovorans LB400]
 gi|91685683|gb|ABE28883.1| KpsF/GutQ [Burkholderia xenovorans LB400]
          Length = 327

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 184/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDDGFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T +D+ I LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTAEDVFIALSNSGETEELMAILPLIKRLGAKLIAMTGRPSSSLAQLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VAKEACPMNLAPTASTTAALALGDALALAVLDARGFGRDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD    + GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDDLPKVTPEATVRDALFQLTAKRMGMTAIVDHDDHVAGIFTDGDLRRVLEREGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L +  VM   P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RQLPIASVMTAGPRTIGPDQLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|218706565|ref|YP_002414084.1| polysialic acid capsule expression protein [Escherichia coli
           UMN026]
 gi|254038116|ref|ZP_04872174.1| polysialic acid capsule expression protein [Escherichia sp. 1_1_43]
 gi|218433662|emb|CAR14577.1| Polysialic acid capsule expression protein [Escherichia coli
           UMN026]
 gi|226839740|gb|EEH71761.1| polysialic acid capsule expression protein [Escherichia sp. 1_1_43]
          Length = 339

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|312129259|ref|YP_003996599.1| kpsf/gutq family protein [Leadbetterella byssophila DSM 17132]
 gi|311905805|gb|ADQ16246.1| KpsF/GutQ family protein [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/326 (38%), Positives = 202/326 (61%), Gaps = 9/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++ + +  A + +  E   + SL S++  E    F   V  I   +G+VV++GIGKS  I
Sbjct: 5   VEKNIIDTAKKVLADESEAIKSLISTIGSE----FEEVVNLILNSRGKVVLSGIGKSAII 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+++TL STG  + F+HA +A HGDLG+I  +D+I++LS SG++ ELK ++   RR  
Sbjct: 61  AQKISATLNSTGQKAVFMHATDAVHGDLGIIDDEDVIVILSKSGNTPELKVLIPLIRRLP 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ + S+  S +A ++D VL      E+CP  LAPTTS  + LA+GDALA+ LLE+R 
Sbjct: 121 NKLVGMVSDLDSFLARNSDYVLNAHVNREACPMNLAPTTSTTVSLALGDALAVCLLEARG 180

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F++ DF   HPGG LG  L++  SD+ +  + +P+VK    + + I  ++ KR G  AV+
Sbjct: 181 FTKRDFAKYHPGGSLGKKLYLKVSDI-YPNNEVPIVKEEAGMEEVILEMTSKRLGTTAVI 239

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +E   L GIIT+GD+ R   + ++  S++  D+M +NPKVI +D     A+ L+++ +I+
Sbjct: 240 NEEGHLTGIITDGDLRRKLREKVDVFSLKALDLMSRNPKVIRKDDFAVNALNLMQELSIT 299

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V ++ QK +G VH  DLLR G++
Sbjct: 300 QLVVAEN-QKVLGFVHLHDLLREGLV 324


>gi|91215228|ref|ZP_01252200.1| KpsF/GutQ [Psychroflexus torquis ATCC 700755]
 gi|91186833|gb|EAS73204.1| KpsF/GutQ [Psychroflexus torquis ATCC 700755]
          Length = 320

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 139/331 (41%), Positives = 196/331 (59%), Gaps = 19/331 (5%)

Query: 19  MKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           M++  +Q   + II  E + + +LE+ +       F  AV+ I   KGRV+ITGIGKS  
Sbjct: 1   MEDVAIQSYAKDIILMESKAIQNLEALIDK----SFSDAVKAIFDSKGRVIITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +TL STGTP+ F+HAA+A HGDLG I +DD++I +S SG++ E+K +    + F
Sbjct: 57  IATKIVATLNSTGTPAVFMHAADAIHGDLGTILKDDIVICISKSGNTPEIKVLAPLIKNF 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LIAIT    S +   AD VL    E E+CP+ LAPTTS   QL +GDALA+ LL+ R
Sbjct: 117 KNTLIAITGNKDSFLGKQADFVLNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLKLR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            FS NDF   HPGG LG TL++  SD+  S +  P V    PL D I  +S    G  AV
Sbjct: 177 GFSRNDFAKFHPGGALGKTLYLRVSDIT-SQNMKPQVNPETPLKDVIIEISTNMLGVTAV 235

Query: 257 VDEGQKLKGIITEGDIFR------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           + E  ++ GIIT+GD+ R      NF K    L  +D+M KNPK I    +   A+ LL 
Sbjct: 236 L-ENDEVIGIITDGDLRRMLSTTENFTK----LKAKDIMTKNPKTIANSAMAIDALDLLE 290

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++I+ L+  ++ + A G+VH  +L++ GII
Sbjct: 291 TYDITQLISHENGKYA-GVVHLHNLVKEGII 320


>gi|34580432|ref|ZP_00141912.1| kpsF protein [Rickettsia sibirica 246]
 gi|229586753|ref|YP_002845254.1| KpsF [Rickettsia africae ESF-5]
 gi|28261817|gb|EAA25321.1| kpsF protein [Rickettsia sibirica 246]
 gi|228021803|gb|ACP53511.1| KpsF [Rickettsia africae ESF-5]
          Length = 319

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 180/287 (62%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+   G+ PT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYPEASVIGV-PTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV         I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDKNQNLVGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNIT 294


>gi|312797339|ref|YP_004030261.1| Arabinose-5-phosphate isomerase [Burkholderia rhizoxinica HKI 454]
 gi|312169114|emb|CBW76117.1| Arabinose-5-phosphate isomerase (EC 5.3.1.13) [Burkholderia
           rhizoxinica HKI 454]
          Length = 335

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 144/321 (44%), Positives = 194/321 (60%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A   +  E   +  L + L GE    F  AVE + A KGRVV++GIGKSGHI  KLA
Sbjct: 19  LQLAQHVLDIEAEAIRGLSTRLNGE----FVVAVEMLLACKGRVVVSGIGKSGHIARKLA 74

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEASHGDLGM+T DD+ I LS SG S+EL  IL   +R    LIA
Sbjct: 75  ATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGLSNSGESEELIEILPLIKRLGAKLIA 134

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A  AD+ L    E E+CP  LAPT S    LA+GDALA+A+L++R FS +D
Sbjct: 135 VTGRPESSLAKLADVHLNARVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFSADD 194

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L     DVM +GD +P V +   + DA+  ++ KR G  A+VD   +
Sbjct: 195 FARSHPGGTLGRRLLTYVRDVMRTGDEVPRVTLCATVRDALFEITAKRLGMTAIVDGDSR 254

Query: 263 LKGIITEGDIFRNF-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GI T+GD+ R   HK D+  L + DVM   P+ I    L   A++L+ +  I+ ++VV
Sbjct: 255 VEGIFTDGDLRRVLEHKGDILGLPITDVMTHKPRTISAGQLAVEAVELMERFRINQMLVV 314

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
                 IG ++  DL    +I
Sbjct: 315 GADGMLIGALNTHDLFSAKVI 335


>gi|296161545|ref|ZP_06844350.1| KpsF/GutQ family protein [Burkholderia sp. Ch1-1]
 gi|295888189|gb|EFG68002.1| KpsF/GutQ family protein [Burkholderia sp. Ch1-1]
          Length = 327

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 184/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV+ I   +GRVV++GIGKSGH+  KLA+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDDGFVGAVDFILGCRGRVVVSGIGKSGHVARKLAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T +D+ I LS SG ++EL AIL   +R    LIA+T    S +A  AD+ L   
Sbjct: 87  GDLGMVTAEDVFIALSNSGETEELMAILPLIKRLGAKLIAMTGRPSSSLAQLADVHLNSG 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
              E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VAKEACPMNLAPTASTTAALALGDALALAVLDARGFGRDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD +P V     + DA+  L+ KR G  A+VD    + GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDDLPKVTPEATVRDALFQLTAKRMGMTAIVDHDDHVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L +  VM   P+ I  D L   A++L+ +H I+ ++VVD+  K IG ++  DL    +
Sbjct: 267 RQLPISSVMTAGPRTIGPDQLAVEAVELMERHRINQMLVVDEAGKLIGALNMHDLFSKKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|191171856|ref|ZP_03033402.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           F11]
 gi|256024471|ref|ZP_05438336.1| polysialic acid capsule expression protein KpsF [Escherichia sp.
           4_1_40B]
 gi|300931822|ref|ZP_07147119.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 187-1]
 gi|301326832|ref|ZP_07220132.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 78-1]
 gi|331659223|ref|ZP_08360165.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA206]
 gi|331664557|ref|ZP_08365463.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA143]
 gi|190907891|gb|EDV67484.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           F11]
 gi|222034662|emb|CAP77404.1| hypothetical protein LF82_461 [Escherichia coli LF82]
 gi|281179981|dbj|BAI56311.1| polysialic capsule transport protein KpsF [Escherichia coli SE15]
 gi|300460245|gb|EFK23738.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 187-1]
 gi|300846507|gb|EFK74267.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 78-1]
 gi|315297684|gb|EFU56961.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 16-3]
 gi|323978983|gb|EGB74063.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
 gi|324011893|gb|EGB81112.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 60-1]
 gi|331053805|gb|EGI25834.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA206]
 gi|331058488|gb|EGI30469.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA143]
          Length = 327

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|301017364|ref|ZP_07182122.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
 gi|300400241|gb|EFJ83779.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
          Length = 327

 Score =  223 bits (569), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKISA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|300923597|ref|ZP_07139626.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 182-1]
 gi|300420114|gb|EFK03425.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 182-1]
 gi|323971786|gb|EGB67012.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
          Length = 327

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L      Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---PVQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L  E E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMENETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V +       I  ++    G V V D   +L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVHLDASFKTVIQRITSGCQGMVMVEDAEGEL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + E+T++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEETMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|300935339|ref|ZP_07150342.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
 gi|300459431|gb|EFK22924.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
          Length = 327

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 21  SVRQTLAEQCAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 77

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 78  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 137

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 138 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 197

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 198 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 255

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 256 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 315

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 316 ANKVTGLVRIFD 327


>gi|170680699|ref|YP_001745202.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           SMS-3-5]
 gi|170518417|gb|ACB16595.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           SMS-3-5]
 gi|312947500|gb|ADR28327.1| Polysialic acid capsule expression protein [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 339

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|290968951|ref|ZP_06560486.1| putative arabinose 5-phosphate isomerase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290780907|gb|EFD93500.1| putative arabinose 5-phosphate isomerase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 323

 Score =  223 bits (569), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/324 (40%), Positives = 199/324 (61%), Gaps = 10/324 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V+ A   ++ E +G+ +L       L+  F  AV+ I A  GRV++TG+GKSGHI  K+A
Sbjct: 4   VETAKDVLLQEAKGIEALVP----RLNQSFINAVQLILASSGRVIVTGMGKSGHIARKVA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGTPS F+H  EA HGDLGM+T +D++   S SG + E+  IL   +R   P+IA
Sbjct: 60  ATLSSTGTPSVFLHPGEAIHGDLGMVTANDVVTAFSNSGETMEILNILPSLKRIGAPIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +     S +A +A+++L +  E E+CP GLAPTTS    LA+GDALA+ LL   +F+++ 
Sbjct: 120 VVGNPYSTLAKNAEVILDVAVEKEACPLGLAPTTSTTAALALGDALAVVLLSCHHFTKDQ 179

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F V HPGG LG  L +  + VMH     P +     + DA+ +++EK  G V+VVD   K
Sbjct: 180 FAVFHPGGALGRKLLLTVAQVMHKEADNPTISADGTVQDALFLMTEKGLGAVSVVDTAGK 239

Query: 263 LKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVL 317
           L G++T+GD+ R      N L   ++ +M KNP+ I  D L   A+ ++ ++    I+VL
Sbjct: 240 LIGLVTDGDVRRGLETGANFLQWPLDAMMTKNPRQIRADRLAAEALHIMEKNQPRPITVL 299

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
            VVD+  +A+G+VH  DLL+ G++
Sbjct: 300 PVVDETGQAVGMVHITDLLKQGVV 323


>gi|26249521|ref|NP_755561.1| hypothetical protein c3686 [Escherichia coli CFT073]
 gi|26109929|gb|AAN82134.1|AE016766_222 Hypothetical protein yrbH [Escherichia coli CFT073]
          Length = 339

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKISAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|325578162|ref|ZP_08148297.1| arabinose-5-phosphate isomerase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159898|gb|EGC72027.1| arabinose-5-phosphate isomerase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 311

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/314 (41%), Positives = 193/314 (61%), Gaps = 13/314 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E + L+ L   L  E    F   V+ I A +GR+VI GIGKSG IG K+ 
Sbjct: 4   LQIARETLSVESQALAQLSQRLDDE----FSQVVDLILACEGRLVIGGIGKSGLIGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +R+F   D
Sbjct: 120 LTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARHFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+        D ++I++E R G VA+V E Q+
Sbjct: 180 FAKFHPGGSLGRRLLCKVKDQMQT--RLPITTPDTSFTDCLSIMNEGRMG-VALVMENQQ 236

Query: 263 LKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           LKGIIT+GD+ R    N    LN  + +++M  +PK I E+  L  A  L+++  I  L+
Sbjct: 237 LKGIITDGDVRRALTANGADTLNK-TAKELMTSSPKTIHENEFLAKAEDLMKEKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENNVVGLVEF 309


>gi|238028652|ref|YP_002912883.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia glumae
           BGR1]
 gi|237877846|gb|ACR30179.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia glumae
           BGR1]
          Length = 327

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/301 (43%), Positives = 185/301 (61%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALREQLDGDFVGAVGLLLNCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+T DD+ I +S SG S EL +IL   +R    LIA+T   +S +A  +D+ L   
Sbjct: 87  GDLGMVTADDVFIAISNSGESAELVSILPLIKRLGAKLIAMTGRPQSSLAQLSDVHLNAA 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+C   LAPT S    LA+GDALA+ +L++R F  +DF   HPGG LG  L     D
Sbjct: 147 VEKEACSLNLAPTASTTAALALGDALAVVVLDARGFGPDDFARSHPGGALGRRLLTYVRD 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM +GD IP V +   L DA+  ++ KR G  AVVDE  ++ GI T+GD+ R   +  D 
Sbjct: 207 VMRTGDEIPTVTLAATLSDALFQITAKRMGMTAVVDEHNRVAGIFTDGDLRRVLERDGDF 266

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L + +VM ++P+ I  D L   A++L+ ++ I+ ++V D     IG ++  DL    +
Sbjct: 267 RRLPIGNVMTRHPRTIAPDHLAVEAVELMERYRINQMLVTDPDGTLIGALNMHDLFSQKV 326

Query: 341 I 341
           I
Sbjct: 327 I 327


>gi|332664725|ref|YP_004447513.1| KpsF/GutQ family protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332333539|gb|AEE50640.1| KpsF/GutQ family protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 324

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/326 (39%), Positives = 193/326 (59%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +KN  +  A ++I  E   L  L +SL       F   VE I A  GRV++TGIGKS  I
Sbjct: 4   LKNIILSTARQTIEIEAATLQDLRNSLDE----GFVATVEAIYAATGRVILTGIGKSAII 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+ +TL STGTP+ F+HAA+A HGDLGMI   D++I LS SG + E+K ++   +   
Sbjct: 60  AQKIVATLNSTGTPAIFLHAADAIHGDLGMIQVQDVVICLSKSGETPEIKVLVPLIKNLG 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI + S   S +A  A  +L  P + E+ P+ LAPT S   Q+A+GDALA +L   R 
Sbjct: 120 TMLIGMVSNKDSYLAKQAQFILHTPIDREADPNNLAPTASTTAQMAMGDALATSLCALRG 179

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS  DF   HPGG LG  L++  SD +++ ++ P+V     +   I  ++ KR G  AVV
Sbjct: 180 FSPKDFAQFHPGGSLGKQLYLRVSD-LYTHNARPMVDPATGIKRTILEITSKRLGATAVV 238

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D  +K+ GI+T+GD+ R   +  N   V  +D+M  +PK I    +   A++++R+++IS
Sbjct: 239 DTDEKVLGIVTDGDLRRMLERLDNWTDVCAQDIMSVHPKTIFAHAMAVHALEIMRKYSIS 298

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD+ +K +G+VH  DL+R GI+
Sbjct: 299 QLLVVDEEEKYVGVVHLHDLIREGIV 324


>gi|213855735|ref|ZP_03383975.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 274

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 120/274 (43%), Positives = 171/274 (62%), Gaps = 4/274 (1%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A+
Sbjct: 2   GMGKSGHIGRKMAATFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAAL 61

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +   +R  +PLI IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA
Sbjct: 62  IPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALA 121

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL++R F+  DF + HPGG LG  L +  SD+MH+GD IP V     L DA+  ++ K
Sbjct: 122 VALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRK 181

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G   + DE  K+ GI T+GD+ R F    D+  L + +VM      +    L   A+ 
Sbjct: 182 NLGMTVICDESMKIDGIFTDGDLRRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALN 241

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L++  +I+ ++V D  Q  +G++H  DLLR G++
Sbjct: 242 LMQSRHITSVLVADGDQ-LLGVLHMHDLLRAGVV 274


>gi|330909003|gb|EGH37517.1| capsular polysaccharide export system protein KpsF [Escherichia
           coli AA86]
          Length = 327

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/314 (40%), Positives = 187/314 (59%), Gaps = 11/314 (3%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA+++ R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIQQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
              HPGG LG  L    +DVM H    +P V++       I  ++    G V V D    
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMLH---DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|331648725|ref|ZP_08349813.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
 gi|331042472|gb|EGI14614.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
          Length = 339

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 186/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA+++ R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIQQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMLH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|108763284|ref|YP_634060.1| GutQ protein [Myxococcus xanthus DK 1622]
 gi|108467164|gb|ABF92349.1| GutQ protein [Myxococcus xanthus DK 1622]
          Length = 352

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 122/293 (41%), Positives = 181/293 (61%), Gaps = 4/293 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AV+ ++  +G+V++TG+GK+GHIG KL++TLASTG  S ++H AEA HGDLG
Sbjct: 55  RLGDDFLRAVQLVRDCRGQVIVTGMGKAGHIGQKLSATLASTGIRSVYLHPAEAVHGDLG 114

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            + R D+I+ LS SGS++EL  +L   +R   P+IA+T + KS +   AD+VL +    E
Sbjct: 115 RVGRGDVILALSNSGSTEELIRLLPSFKRMETPVIALTGDAKSPLGRGADVVLDIGAIAE 174

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           +CP GL PT S     AIGDALA+ +L SR F   D+ +LHPGGKLG       ++M +G
Sbjct: 175 ACPMGLVPTASTAALHAIGDALAMTVLRSRPFGTEDYALLHPGGKLGRSVQRVFELMRTG 234

Query: 228 DSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TL 283
           ++ PLV+   PL   + ++++   R G   VVD+  KL GI T+GD+ R     L   T+
Sbjct: 235 NANPLVRDTSPLSAVVGVMTKTPGRPGAACVVDKAGKLVGIFTDGDLRRRVEAGLTDFTV 294

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V ++M KNP+ +  +TL+  A   +R+  +  L VVD   +A+G++   DLL
Sbjct: 295 PVRELMGKNPRCVTPETLVLAAATQMRELRVDQLPVVDVEGRAVGLLDVQDLL 347


>gi|317401286|gb|EFV81926.1| NDP-sugar epimerase [Achromobacter xylosoxidans C54]
          Length = 329

 Score =  223 bits (568), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/324 (41%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A R++  E +G+  L +     L   F   V  + A +GRVV++GIGK+GH+  
Sbjct: 10  ETALASARRTLQIESQGILDLSA----RLDDSFAQVVAMLLACRGRVVVSGIGKTGHVAR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA HGDLGMITRDD++I +S+SGS  EL  IL  ARR    
Sbjct: 66  KIAATLASTGTPAFFVHAAEAVHGDLGMITRDDVLIAISYSGSGQELLTILPVARRMGAG 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+AIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F 
Sbjct: 126 LVAITGNPQSELALLADVHLDASVAQEACPLNLAPTASTTAALALGDALAVACLEARGFG 185

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L     +VM  GD++P+V +G P+  A+ ++S K  G   V D 
Sbjct: 186 PQDFARSHPGGALGRRLLTHVRNVMRQGDALPVVALGTPVAQALEVMSAKGMGMTVVCDP 245

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            ++  GI T+GD+ R    + D+ +L+VE  M ++P+ I  D L   A + + +  ++ +
Sbjct: 246 QRRPVGIFTDGDLRRLIARYGDIRSLNVEAGMTRSPRSINPDALAVEAARQMDELRLNHM 305

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D     +G +H  DL+   ++
Sbjct: 306 LVLDADGSLLGALHMHDLMAAKVV 329


>gi|255020582|ref|ZP_05292645.1| Arabinose 5-phosphate isomerase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969967|gb|EET27466.1| Arabinose 5-phosphate isomerase [Acidithiobacillus caldus ATCC
           51756]
          Length = 343

 Score =  223 bits (567), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 125/302 (41%), Positives = 184/302 (60%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L   L   F  A + +   +GRVV+TG+GKSG I  K+A+TLASTG+P+ F+H AE S
Sbjct: 42  AALVERLDEHFVTACQLLLDCRGRVVVTGMGKSGIIAKKIAATLASTGSPALFLHPAEGS 101

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+TRDD+++ LS+SG + EL AIL   +R  +PLIA+T   +S +A  A++ L  
Sbjct: 102 HGDLGMLTRDDVLLALSYSGETAELLAILPVVKRLGVPLIAMTGRRQSTLARLAEVHLDC 161

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    LA+GDALA+ALL +R F+ +DF + HPGG LG  L +   
Sbjct: 162 RVEREACPLNLAPTASTTATLAMGDALAMALLRARGFTADDFALSHPGGALGRRLLLRVQ 221

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+M  G  +P V+   PL +AI  +S K  G   +VDE +++ GI T+GD+ R   +   
Sbjct: 222 DLMRRGADLPRVRPQTPLHEAILEMSGKGLGMTTIVDEQERVVGIFTDGDLRRALARGQG 281

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L + ++    P+ I    L   A+  +    I+ L+++ D  +  GI+   DLLR G
Sbjct: 282 IWNLPMAELCHPRPRHIAATALAAEALAQMEAERINALLILRDDGQLEGILAMHDLLRAG 341

Query: 340 II 341
           I+
Sbjct: 342 IV 343


>gi|260914118|ref|ZP_05920591.1| arabinose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
 gi|260631751|gb|EEX49929.1| arabinose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
          Length = 311

 Score =  223 bits (567), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/313 (41%), Positives = 194/313 (61%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E++ LS L  +L       F   VE I   +GR+VI GIGKSG +G K+ 
Sbjct: 4   LQIARETLQVEEKALSRLSKNLDD----SFSDIVELILNCQGRLVIGGIGKSGLVGKKMV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNTIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A HAD VL +  E E CP+ LAPTTS ++ +A+GDALA++L+++R+F   D
Sbjct: 120 LTGNPNSTLAKHADYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVSLIKARDFQPAD 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +   +P+  +  P  D +TI++E R G   V+++G+ 
Sbjct: 180 FAKFHPGGSLGRRLLCRVKDQMQT--RLPVTALHTPFTDCLTIMNEGRMGVALVMEQGE- 236

Query: 263 LKGIITEGDIFRNFHKD-LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           LKGIIT+GDI R    + + TLS   +++M  NPK I  D  L+ A  L++   I  L+V
Sbjct: 237 LKGIITDGDIRRALSANSVQTLSKTAQELMTSNPKTIHMDAFLSEADALMKAKKIHSLVV 296

Query: 320 VDDCQKAIGIVHF 332
           VDD  K +G+V F
Sbjct: 297 VDDNNKVVGLVEF 309


>gi|323951537|gb|EGB47412.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
          Length = 327

 Score =  223 bits (567), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKIFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|237746782|ref|ZP_04577262.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes HOxBLS]
 gi|229378133|gb|EEO28224.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes HOxBLS]
          Length = 338

 Score =  223 bits (567), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/336 (40%), Positives = 196/336 (58%), Gaps = 3/336 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K V +    +     ++ A  ++  E   L +L      E +  F  +V  +   KGRVV
Sbjct: 3   KEVIKNKTPIDSGRLLKLADDTLKTEALALETLRKRFLEEDAEHFLESVSLLLNCKGRVV 62

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ++G+GKSGHIG K+A+TLASTGTP+ FVH AEA+HGDLGMIT DD+ I +S+SG + EL 
Sbjct: 63  VSGMGKSGHIGRKIAATLASTGTPAMFVHPAEAAHGDLGMITHDDVFIAISYSGEAGELM 122

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           AI    +R    LIA+T   +S +A  AD+ L +  E E+CP  LAPT S    LA+GDA
Sbjct: 123 AIAPIIKRMGTRLIAMTGRPRSSLAQLADVHLNVFVEKEACPLNLAPTASTTTTLALGDA 182

Query: 189 LAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           +A+A+L++R F E+DF   HPGG LG  L    SD+M  GD +P+VK    L DA+  ++
Sbjct: 183 IAVAVLDARGFREDDFARSHPGGTLGRRLLTLVSDIMRKGDDVPVVKADTLLYDALFEIT 242

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVA 305
           +K     +VVD   +  G+ T+GD+ R   K  N   + ++DVM KNP+ I    L   A
Sbjct: 243 KKGIAMTSVVDNEGRAIGVFTDGDLRRLIEKQQNFSQIVIKDVMSKNPRTIAPGKLAAEA 302

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + ++ +  I+ L+V D   K +G +H  DL    +I
Sbjct: 303 VSMMEKFRINQLLVTDPNGKLVGALHIHDLTEAKVI 338


>gi|257461219|ref|ZP_05626317.1| arabinose 5-phosphate isomerase [Campylobacter gracilis RM3268]
 gi|257441593|gb|EEV16738.1| arabinose 5-phosphate isomerase [Campylobacter gracilis RM3268]
          Length = 320

 Score =  222 bits (566), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 126/294 (42%), Positives = 183/294 (62%), Gaps = 8/294 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   AV  I A KG+V++TG+GKSGHIG K+A+TLASTGTPSFFVH  EA HGDLGMI +
Sbjct: 29  EIERAVSLILACKGKVIVTGVGKSGHIGVKIAATLASTGTPSFFVHPTEALHGDLGMIGK 88

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++ +S+SG S+EL  IL + +RF + +IA+  +  S +    D  ++L    E+CP 
Sbjct: 89  DDMVLAISFSGESEELVRILPHLKRFGVKIIAMARDKNSSLGKVCDEFISLSIVKEACPL 148

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
           G APT S  + L +GDALAI L+  R F + DF   HPGG LG  LFV   DVM S  ++
Sbjct: 149 GAAPTVSTTLTLGLGDALAICLMRQRRFGKEDFANFHPGGSLGKRLFVKVKDVMQS-KNL 207

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVED 287
           P+      L  AI I++  + G V +V+E   L+ I+++GD+ R   +   D+N  +++ 
Sbjct: 208 PVANRNASLKQAIDIMTHGKLGTVLLVNEKGALEAILSDGDLRRALMREDFDINDGALK- 266

Query: 288 VMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              KNPK++ +  +L + A+ L+ Q  I VL VV++   A GI+H  DL   G+
Sbjct: 267 YATKNPKILDDKNMLAIDALNLIEQFKIQVLPVVENGVPA-GILHIHDLTSLGL 319


>gi|329297314|ref|ZP_08254650.1| D-arabinose 5-phosphate isomerase [Plautia stali symbiont]
          Length = 290

 Score =  222 bits (566), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 117/262 (44%), Positives = 168/262 (64%), Gaps = 7/262 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL  L+  +  +    F  A + I A +G+VV+ GIGKSGHIG K+A+T ASTGTP+
Sbjct: 21  EREGLEQLDQYINAD----FSRACKMIFACRGKVVVMGIGKSGHIGKKMAATFASTGTPA 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGDLGM++ +D++I +S SG S E+ A++   +R  + LI +TS  +S + 
Sbjct: 77  FFVHPGEASHGDLGMVSTNDVVIAISNSGESGEILALIPVLKRQKVQLICLTSRPESAMG 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F++ DF + HPGG L
Sbjct: 137 RAADVHLCVKVPQEACPLGLAPTSSTTATLVMGDALAVALLEARGFTQEDFALSHPGGAL 196

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  + +  SD+MHSGD IP V     L DA+  ++ K  G   +VD+  K++GI T+GD+
Sbjct: 197 GRKMLLHVSDIMHSGDEIPHVTRDASLRDALLEITRKNLGLTVIVDDLMKIEGIFTDGDL 256

Query: 273 FRNFHK--DLNTLSVEDVMIKN 292
            R F    D  +  ++DVM + 
Sbjct: 257 RRIFDMGIDFQSARIQDVMTRG 278


>gi|118340596|gb|ABK80646.1| putative KpsF/GutQ [uncultured marine Nitrospinaceae bacterium]
          Length = 338

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 132/341 (38%), Positives = 196/341 (57%), Gaps = 10/341 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLES----SLQGELSFQFHCAVEKIKAI 63
            K  T+K   ++++S      +SII   R +  +ES     L   +  QF   V  +   
Sbjct: 1   MKPSTKK--RVLQDSAENQDAQSIIETARKVLDIESLAIAELGNRIDDQFVNVVHHLNQC 58

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           K  +VITG+GKSG IG K++ST +S G PS F+HA+EASHGDLGMI+  D +I +S SG 
Sbjct: 59  K-HLVITGVGKSGLIGKKISSTFSSIGLPSLFLHASEASHGDLGMISEGDTVIAISNSGE 117

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +DE+  +L    R    L+ +T   +S +A  +D VL +  + E+C   L PT S    L
Sbjct: 118 TDEVVKLLPIFNRIKCTLVGMTGNMQSSLAKRSDYVLDVSVKVEACSKDLVPTASTTATL 177

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           A+GDALA+A +E R   E DF + HPGG LG  L     D+MHSG+ IP +K    +   
Sbjct: 178 AMGDALAMAFMELRGVQEEDFALNHPGGNLGRKLLTLVDDLMHSGEDIPRIKEDADIYQV 237

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDT 300
           +  +S+KR G   VV +  +L GIIT+GD+ R     KD++    +++M   PK I  DT
Sbjct: 238 LKEISQKRLGMTLVVGDQGQLLGIITDGDLRRLIEKQKDISQSCAKNMMGGKPKTITRDT 297

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L T A+++++ H I+ L V+ D +K  GI+H  D+L+ G++
Sbjct: 298 LATKAVRVMQDHAITSLAVISDDRKIEGIIHLHDILKAGVV 338


>gi|32034732|ref|ZP_00134863.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|165975848|ref|YP_001651441.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190149680|ref|YP_001968205.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245217|ref|ZP_07527308.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307249609|ref|ZP_07531595.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307254164|ref|ZP_07536009.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256432|ref|ZP_07538214.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307258627|ref|ZP_07540362.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307262988|ref|ZP_07544610.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|165875949|gb|ABY68997.1| probable phosphosugar isomerase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189914811|gb|ACE61063.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853861|gb|EFM86075.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306858307|gb|EFM90377.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306862864|gb|EFM94813.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865062|gb|EFM96963.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306867284|gb|EFM99137.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306871614|gb|EFN03336.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 311

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 186/294 (63%), Gaps = 7/294 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F+ AVE +   +GRVV+ GIGKSG +G K+ +T ASTGTPSF++H  EA 
Sbjct: 19  SQLNQRLDGAFNQAVEMVLNCEGRVVVAGIGKSGLVGQKMVATFASTGTPSFYLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S SG +D++  +L   + F   +IA+T    S +A HA+++L +
Sbjct: 79  HGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKIIAMTGNPNSTLAQHANLILNI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F   DF   HPGG LG  L     
Sbjct: 139 GVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKAEDFARFHPGGSLGRKLLNRVK 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHK 278
           DVM +   +P+ +        +++++E R G VA++ +G++L+GIIT+GDI R    F  
Sbjct: 199 DVMQT--KLPIAQPNADFSTILSVMNEGRMG-VALIMQGEQLQGIITDGDIRRTLAQFGT 255

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           D    + E +M K+PK + ++T L  A +++++ +I  L+ ++D  K  GI+ F
Sbjct: 256 DSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLIALNDEGKVSGIMEF 309


>gi|302381869|ref|YP_003817692.1| KpsF/GutQ family protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192497|gb|ADL00069.1| KpsF/GutQ family protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 332

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/307 (40%), Positives = 183/307 (59%), Gaps = 10/307 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +LE ++   ++     A + I +  G VV+TGIGKSGHIG K+A+TLASTGT +FFVH
Sbjct: 32  LQALERTVDASVAR----ACDIILSRPGYVVVTGIGKSGHIGGKIAATLASTGTNAFFVH 87

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            AE SHGDLGM+  D  ++ +S SG S EL+  L + +R  IP+I +T    S +A  + 
Sbjct: 88  PAEMSHGDLGMLRHDTTLLAISNSGESRELRDPLLFCQRNGIPVIGMTQRGSSFLARMSA 147

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           + + +P   E+CP+GLAPTTS +M LA+GDALA+ L+  R FS   F + HPGG LG   
Sbjct: 148 VAMVMPSVAEACPNGLAPTTSTLMTLALGDALAMVLMNRRGFSAEAFGMHHPGGALGMSL 207

Query: 218 VCASDVMHSGDS---IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               + M  GD+    P V +     D +  ++  R G VAV+D+  KL G+IT+GD+ R
Sbjct: 208 QSVREWM--GDNHAPPPTVPLTASFADVVASITAGRKGAVAVLDDDGKLAGMITDGDVRR 265

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F  D+  +  +DVM + P  +  D  ++  + LL  + IS L VV+D  +   IVH  +
Sbjct: 266 AFAADVTGVRADDVMNRQPITVSPDQRMSDVVDLLTANRISNLFVVED-DRPRAIVHVAE 324

Query: 335 LLRFGII 341
           L++ G +
Sbjct: 325 LMQAGYL 331


>gi|118594082|ref|ZP_01551429.1| carbohydrate isomerase, KpsF/GutQ family protein [Methylophilales
           bacterium HTCC2181]
 gi|118439860|gb|EAV46487.1| carbohydrate isomerase, KpsF/GutQ family protein [Methylophilales
           bacterium HTCC2181]
          Length = 324

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 125/291 (42%), Positives = 181/291 (62%), Gaps = 2/291 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV+ I   KGRVV++G+GKSGHI  K++STL+STGTP+FF+H  EASHGDLGMI + 
Sbjct: 34  FVDAVKAIVGCKGRVVLSGMGKSGHIARKISSTLSSTGTPAFFMHPGEASHGDLGMIVKS 93

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+II+ S SG SDEL +IL   +R    +I++T+   S +A  +DI + L    E+CP G
Sbjct: 94  DVIILFSNSGQSDELISILPNIKRIGTKIISLTNNEASEIALQSDIHINLNVMKEACPLG 153

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           L+PT S+ + LA+GDALAI +LE + FS  +F   HPGG LG    V   D+M  G++IP
Sbjct: 154 LSPTASSTVALALGDALAICVLEEKGFSAEEFKRSHPGGSLGKNSLVKVKDIMLIGNNIP 213

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
           ++     L DAI  +SEK+ G  +VVD  +K  GI T+GD+ R    + NT S + + M 
Sbjct: 214 MINFDALLGDAIKEISEKKVGFTSVVDSQKKPIGIFTDGDLRRAILNNKNTNSPILECMT 273

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            NP ++ E+ L    + ++    I+  +V +     IGI++   LL+  +I
Sbjct: 274 NNPIILHEEQLAIDVVNIMETSKITGFLVTNKTGILIGILNLQVLLKQKVI 324


>gi|301047599|ref|ZP_07194667.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|300300509|gb|EFJ56894.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
          Length = 327

 Score =  222 bits (566), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 184/313 (58%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L   +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTFATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|303249749|ref|ZP_07335953.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251937|ref|ZP_07533838.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651316|gb|EFL81468.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860629|gb|EFM92641.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 311

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 186/294 (63%), Gaps = 7/294 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F+ AVE +   +GRVV+ GIGKSG +G K+ +T ASTGTPSF++H  EA 
Sbjct: 19  SQLNQRLDGAFNQAVEMVLNCEGRVVVAGIGKSGLVGQKMVATFASTGTPSFYLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S SG +D++  +L   + F   +IA+T    S +A HA+++L +
Sbjct: 79  HGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKIIAMTGSPNSTLAQHANLILNI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F   DF   HPGG LG  L     
Sbjct: 139 GVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKAEDFARFHPGGSLGRKLLNRVK 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHK 278
           DVM +   +P+ +        +++++E R G VA++ +G++L+GIIT+GDI R    F  
Sbjct: 199 DVMQT--KLPIAQPNADFSTILSVMNEGRMG-VALIMQGEQLQGIITDGDIRRTLAQFGT 255

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           D    + E +M K+PK + ++T L  A +++++ +I  L+ ++D  K  GI+ F
Sbjct: 256 DSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLIALNDEGKVSGIMEF 309


>gi|153003237|ref|YP_001377562.1| KpsF/GutQ family protein [Anaeromyxobacter sp. Fw109-5]
 gi|152026810|gb|ABS24578.1| KpsF/GutQ family protein [Anaeromyxobacter sp. Fw109-5]
          Length = 344

 Score =  222 bits (565), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 122/308 (39%), Positives = 188/308 (61%), Gaps = 10/308 (3%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE R ++++       L  +F  AV  +   +GRV++TG+GK G +  K+++TLASTGTP
Sbjct: 38  AESRAIAAVR------LDERFAEAVRWVLDCRGRVIVTGMGKPGFVAQKISATLASTGTP 91

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S +VH AEA+HGDLG ITRDD++I LS SG ++EL  +L   ++    ++A+T +  + +
Sbjct: 92  SHYVHPAEAAHGDLGRITRDDVVIALSNSGETEELLRLLPALKKIGARVVAVTRDRVNPL 151

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  AD+ L +    E+CP GLAPT S  + LA+GDALA+ +L +R F + ++ + HPGGK
Sbjct: 152 ARAADLALVIGDVAEACPMGLAPTASTAVLLAVGDALAMTVLANRPFEKEEYALFHPGGK 211

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKGIITEG 270
           LG   +   ++M   +S P+V+   PL  A+  ++E   R G  +VVD   KL GI T+G
Sbjct: 212 LGRGLMKVRELMRGAESNPVVREDQPLSAAVARMTETPGRPGATSVVDAAGKLVGIFTDG 271

Query: 271 DIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+ R   H + + T  V   M +NP+ +  D L+  A ++LRQ  I  + VVDD  + +G
Sbjct: 272 DLRRLVEHGETDFTRPVSAAMGRNPRTVRPDALVVDAARVLRQARIDQVPVVDDEGRPVG 331

Query: 329 IVHFLDLL 336
           ++   DLL
Sbjct: 332 LLDVQDLL 339


>gi|284922967|emb|CBG36059.1| polysialic acid capsule expression protein [Escherichia coli 042]
          Length = 327

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 127/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMLH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|258645775|ref|ZP_05733244.1| arabinose 5-phosphate isomerase [Dialister invisus DSM 15470]
 gi|260403146|gb|EEW96693.1| arabinose 5-phosphate isomerase [Dialister invisus DSM 15470]
          Length = 323

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S+++ A+R +  E   + SL   L       F  AV+ I    GRV++TG+GKSGHI  K
Sbjct: 2   SSIETAIRVLRDEADAILSLIDKLDN----NFESAVDLILHANGRVILTGMGKSGHIAKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +++T+ASTGTPSFF+H AE  HGDLGM+T +D+++  S SG + E+  IL   +R    L
Sbjct: 58  VSATMASTGTPSFFLHPAEGIHGDLGMVTAEDVVVAYSNSGETGEILNILPSLKRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A +AD+VL      E+   GLAPT+S    LA+GDALA+AL+E  NF+ 
Sbjct: 118 IAVVGNTHSTLAENADVVLDAGVLQEADSLGLAPTSSTTAALALGDALAVALMEKENFTA 177

Query: 202 NDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + F V HPGG LG  L +    VMH G   P++K    + DA+ ++++   G V+VVD  
Sbjct: 178 DKFAVFHPGGSLGKRLLMTVEMVMHHGSDNPVIKETASVKDALFVMTKMGLGAVSVVDGK 237

Query: 261 QKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
            KLKG++T+GD+ R     KD   L++++VM +NP VI  D L   A+  + +H    I+
Sbjct: 238 FKLKGLMTDGDVRRGLEKEKDFLMLTIKEVMTQNPLVITADKLAAEALHKMEKHAPHPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD   K+IG+VH  DLLR G++
Sbjct: 298 VLPVVDKDGKSIGMVHVTDLLRQGVV 323


>gi|297569603|ref|YP_003690947.1| KpsF/GutQ family protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925518|gb|ADH86328.1| KpsF/GutQ family protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 323

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 123/291 (42%), Positives = 178/291 (61%), Gaps = 3/291 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F  AVE I     R+V+TGIGKSG IG K+A+TL STGTP+FF+H  EA HGDLG++  
Sbjct: 27  EFARAVELIMNCPSRLVLTGIGKSGIIGQKIAATLNSTGTPAFFLHPVEAMHGDLGVVDP 86

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+I+ +S+SG + EL  +L   ++    +IA+T   +S +A  AD+VL++    E+CP 
Sbjct: 87  RDVILAISYSGETAELNQLLPTLKKRGAAIIAMTGRPESSMARGADVVLSVTVPREACPL 146

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
           GLAPT S    LA+GDALA+ LL  + F    F   HPGG LG  L V  ++VM +GD I
Sbjct: 147 GLAPTASTTASLAMGDALAVVLLNRKKFDARAFRRNHPGGSLGERLKVRVAEVMLTGDGI 206

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     L +A+  L+ K  G V V+    ++ GI+T+GD+ R   +     TL++  V
Sbjct: 207 PRVDSTASLAEALAELNRKNLGAVLVMASAHRMAGILTDGDVRRMLARGEGPETLTLAQV 266

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +PK I  + L   A+ ++++H ++VL V DD ++ IGI+H  DLL  G
Sbjct: 267 MTADPKSISAELLAADALSIMQRHEVTVLPVTDDERQLIGILHLQDLLGKG 317


>gi|26988536|ref|NP_743961.1| KpsF/GutQ family protein [Pseudomonas putida KT2440]
 gi|24983305|gb|AAN67425.1|AE016369_10 KpsF/GutQ family protein [Pseudomonas putida KT2440]
          Length = 317

 Score =  222 bits (565), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 123/293 (41%), Positives = 175/293 (59%), Gaps = 6/293 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L  QF  AV+ I A +GR V+ G+GKSG IG K+ +T ASTGTPSFF+H AEA HG
Sbjct: 23  LADRLDGQFQSAVDLILACEGRTVVCGMGKSGLIGKKMVATFASTGTPSFFLHPAEAFHG 82

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG ++EL  ++   + F    IA+T    S +A HADI L +  
Sbjct: 83  DLGMLKPVDVLVLISYSGETEELIKLIPSLKSFGNKFIAMTGSGNSTLAKHADIWLDISV 142

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP+ LAPTTS +  +A+GDALA+AL+ +  F   DF   HPGG LG  L    +DV
Sbjct: 143 DREVCPNNLAPTTSTLATMAMGDALAVALITANQFKPMDFARYHPGGSLGRKLLTRVADV 202

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MHS    P+V       D + ++++ R G   V+D G +L GI+T+GD+ R   K+   +
Sbjct: 203 MHS--PAPIVSPASSFQDCLLMMTQSRLGLAMVMD-GNELVGIVTDGDLRRALLKNNQVI 259

Query: 284 --SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             SV + M  NP  I  D  ++VA   + ++ I  L VVDDC   +G+V   D
Sbjct: 260 HASVTEFMTLNPHTIPADCRVSVAEAYMLENKIRALAVVDDCGAIVGVVEIFD 312


>gi|148549116|ref|YP_001269218.1| KpsF/GutQ family protein [Pseudomonas putida F1]
 gi|148513174|gb|ABQ80034.1| KpsF/GutQ family protein [Pseudomonas putida F1]
          Length = 310

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 129/311 (41%), Positives = 182/311 (58%), Gaps = 10/311 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++IA+ + ++ L   L GE    F  AVE I   +GR V+ G+GKSG IG K+ +T 
Sbjct: 7   AKEALIAQAQAVTQLADRLDGE----FQSAVELILGCQGRTVVCGMGKSGLIGQKMVATF 62

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG ++EL  ++   + F   +IA+T 
Sbjct: 63  ASTGTPSFFLHPAEAFHGDLGMLKPIDVLILISYSGETEELIKLIPSLKSFGNKIIAMTG 122

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             KS +A HADI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F   DF  
Sbjct: 123 NGKSTLAKHADIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKPMDFAR 182

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     DVMHS    P+V       D + +++  R G   V+D   KL G
Sbjct: 183 YHPGGSLGRKLLTRVCDVMHS--PAPVVSPSTSFHDCLLVMTRSRLGMTVVMDN-DKLVG 239

Query: 266 IITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+GD+ R   +D + +  SVE  M  +P  I ED+ L+ A   +  + I  L V D  
Sbjct: 240 IVTDGDLRRALLEDESVIQASVEQFMTASPHTIREDSQLSEAEAYMLDNKIRALAVTDGD 299

Query: 324 QKAIGIVHFLD 334
              +G+V   D
Sbjct: 300 GLVVGVVEIFD 310


>gi|110643174|ref|YP_670904.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           536]
 gi|47155011|emb|CAE85210.1| KpsF protein [Escherichia coli]
 gi|110344766|gb|ABG71003.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           536]
          Length = 327

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 185/313 (59%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + E+T++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEETMIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|254162893|ref|YP_003046001.1| hypothetical protein ECB_02814 [Escherichia coli B str. REL606]
 gi|297521100|ref|ZP_06939486.1| hypothetical protein EcolOP_25927 [Escherichia coli OP50]
 gi|242378497|emb|CAQ33281.1| kpsF [Escherichia coli BL21(DE3)]
 gi|253974794|gb|ACT40465.1| conserved hypothetical protein [Escherichia coli B str. REL606]
 gi|253978949|gb|ACT44619.1| conserved hypothetical protein [Escherichia coli BL21(DE3)]
          Length = 339

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 184/312 (58%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H  EA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPTEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|218691236|ref|YP_002399448.1| Polysialic acid capsule expression protein [Escherichia coli ED1a]
 gi|218428800|emb|CAR09744.2| Polysialic acid capsule expression protein [Escherichia coli ED1a]
          Length = 339

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 185/312 (59%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMLH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|33591889|ref|NP_879533.1| hypothetical protein BP0701 [Bordetella pertussis Tohama I]
 gi|33598530|ref|NP_886173.1| hypothetical protein BPP4028 [Bordetella parapertussis 12822]
 gi|33603475|ref|NP_891035.1| hypothetical protein BB4501 [Bordetella bronchiseptica RB50]
 gi|33571533|emb|CAE41011.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33574659|emb|CAE39311.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33577599|emb|CAE34864.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381306|gb|AEE66153.1| hypothetical protein BPTD_0707 [Bordetella pertussis CS]
          Length = 329

 Score =  221 bits (564), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/313 (44%), Positives = 186/313 (59%), Gaps = 7/313 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R++  E + ++ L +     L   F   V  + A +GRVV++GIGK+GHI  KLA+TL
Sbjct: 16  ARRTLQTEAQAIADLAA----RLDDSFVQVVGMLLACRGRVVVSGIGKTGHIARKLAATL 71

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVHAAEA HGDLGM+TRDD++I +S+SG+  EL  IL   RR    LIAIT 
Sbjct: 72  ASTGTPAFFVHAAEAIHGDLGMVTRDDVLIAISYSGTGQELLTILPVVRRMGAGLIAITG 131

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F   DF  
Sbjct: 132 NAESELARLADVHLDASVSQEACPLNLAPTASTTAALALGDALAVACLEARGFGREDFAR 191

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     DVM  G ++P+V    PL  A+  +S K  G  AVVD  +K  G
Sbjct: 192 SHPGGALGRRLLTHVRDVMRHGPALPIVAEDAPLPRALEEISAKGMGMTAVVDAQRKPVG 251

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +  D+ +L+V D M + P+ I  D L   A Q +    ++ ++VVD  
Sbjct: 252 IFTDGDLRRLIERVGDIRSLTVADGMTRAPRTIGPDALAAEAAQQMDDRRLNQMLVVDTA 311

Query: 324 QKAIGIVHFLDLL 336
              IG +H  DL+
Sbjct: 312 GVLIGALHTHDLM 324


>gi|84387812|ref|ZP_00990827.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio splendidus 12B01]
 gi|84377327|gb|EAP94195.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio splendidus 12B01]
          Length = 323

 Score =  221 bits (563), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 191/311 (61%), Gaps = 8/311 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG K+A+TLASTGT +
Sbjct: 18  EVAGLTQLDQYFNDD----FCNACDLILNNKGKVVVMGMGKSGHIGKKIAATLASTGTSA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T +  S +A
Sbjct: 74  FFVHPGEAAHGDLGMIGAGDVVIAISNSGESGEILSLFPVLKRLNIKIISMTGKPASNMA 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 134 TLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFALSHPGGAL 193

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +   D+MH+GD++P+V     + DA+  +S+K  G  AVV E   + GI T+GD+
Sbjct: 194 GRQLLLKLEDIMHTGDALPVVAPEALVRDALLEISQKGLGMTAVVGEDGLMAGIFTDGDL 253

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K  D++   + DVM  NP V   + L    + L++  +I+ LM+  +  K +G +
Sbjct: 254 RRILDKRIDIHDTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLCHE-GKLVGAL 312

Query: 331 HFLDLLRFGII 341
           +  DLL+ G++
Sbjct: 313 NMHDLLKAGVM 323


>gi|300993040|ref|ZP_07180148.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|300305164|gb|EFJ59684.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
          Length = 327

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/314 (40%), Positives = 186/314 (59%), Gaps = 11/314 (3%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IA+
Sbjct: 77  TLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAM 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
              HPGG LG  L    +DVM H    +P V++       I  ++    G V V D    
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMLH---DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|167753113|ref|ZP_02425240.1| hypothetical protein ALIPUT_01384 [Alistipes putredinis DSM 17216]
 gi|167659427|gb|EDS03557.1| hypothetical protein ALIPUT_01384 [Alistipes putredinis DSM 17216]
          Length = 321

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 129/313 (41%), Positives = 191/313 (61%), Gaps = 10/313 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A ++I  E   L  LE +L  +    F CAVE I   +G++V+TG+GKSG IG K+A+TL
Sbjct: 13  ARKTIHTEALALKHLEQTLGDD----FVCAVELILHSRGKLVVTGMGKSGLIGRKIAATL 68

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H  EA HGDLGMI+ +D ++ LS+SG +DE+  I+ +       LI++T 
Sbjct: 69  ASTGTPSFFLHPGEAFHGDLGMISPEDTVLALSYSGETDEILKIVPFIHTNGNKLISMTG 128

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A ++D+ L +    E+C   LAPTTS   Q+A+GDA+A+AL++ RNF+  DF  
Sbjct: 129 NPESTLARNSDVHLDVAVRHEACILHLAPTTSTTAQIAMGDAMAVALMKLRNFTSIDFAR 188

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           LHPGG LG  L +   +VMH  + +P+V   C   D I  +S+   G + V+ EG K+ G
Sbjct: 189 LHPGGSLGRRLLMTVGNVMHK-EGLPVVAPDCSAKDMIHAVSKGGLGLI-VICEGDKVLG 246

Query: 266 IITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I+T+GDI R   +   +  ++   D+   NPK I  D  L  A + + QH I+ L+V DD
Sbjct: 247 IVTDGDIRRAMERRESEFFSIRAMDIATLNPKTIGPDEKLIAAEKKMTQHKINSLLVTDD 306

Query: 323 CQKAIGIVHFLDL 335
             K +G++   D+
Sbjct: 307 EGKLVGVIQIYDI 319


>gi|306816718|ref|ZP_07450850.1| Polysialic acid capsule expression protein [Escherichia coli NC101]
 gi|305850283|gb|EFM50742.1| Polysialic acid capsule expression protein [Escherichia coli NC101]
          Length = 339

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/312 (40%), Positives = 184/312 (58%), Gaps = 9/312 (2%)

Query: 27  ALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+ KSGH+G K+++T
Sbjct: 33  SVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMDKSGHVGRKMSAT 89

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 90  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 149

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 150 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFA 209

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 210 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 267

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V + 
Sbjct: 268 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVTNK 327

Query: 323 CQKAIGIVHFLD 334
             K  G+V   D
Sbjct: 328 ANKVTGLVRIFD 339


>gi|282856193|ref|ZP_06265476.1| arabinose 5-phosphate isomerase [Pyramidobacter piscolens W5455]
 gi|282585952|gb|EFB91237.1| arabinose 5-phosphate isomerase [Pyramidobacter piscolens W5455]
          Length = 340

 Score =  221 bits (562), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/291 (42%), Positives = 188/291 (64%), Gaps = 8/291 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A   ++A KGR+V++GIGK+GHIG K+A+TL+S GTPSFF+ A+EA+HGDLGM+  +D+ 
Sbjct: 51  AARLLEACKGRIVVSGIGKAGHIGRKIAATLSSLGTPSFFLQASEAAHGDLGMVRHEDVA 110

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +++S SG + E+ A+L + RR   P+IA++ +  S +A  ADI L    E E+ P  LAP
Sbjct: 111 LLISNSGKTAEVVALLPFFRRIGAPVIAVSGDAASPLALGADIFLNSAIEREADPLNLAP 170

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT---LFVCASDVMHSGDSIPL 232
           T+S  +QLAIGDAL   +   R   + DF + HP G LG    L VC  DVM++  S+P+
Sbjct: 171 TSSTTLQLAIGDALGAMVTLLRGLKKEDFALFHPAGSLGKKLLLRVC--DVMNTSGSLPV 228

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLS--VEDVM 289
           V     + DA+  ++ K +G  +VVD+   L GI T+GD+ R   K+ +  L   VEDVM
Sbjct: 229 VSHETLVKDALFEITSKNYGATSVVDDKGFLVGIFTDGDLRRLIAKEGIRCLDRRVEDVM 288

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +P+ I+ + L   A+ ++ +  ISVL+VVD  ++ +G+VH  +LL+ G+
Sbjct: 289 IGSPRTIVPEALAAEAVHIMEKLEISVLIVVDKDRRPVGMVHIHELLQSGV 339


>gi|312879641|ref|ZP_07739441.1| KpsF/GutQ family protein [Aminomonas paucivorans DSM 12260]
 gi|310782932|gb|EFQ23330.1| KpsF/GutQ family protein [Aminomonas paucivorans DSM 12260]
          Length = 339

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/289 (41%), Positives = 181/289 (62%), Gaps = 4/289 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A   + A  GRVV++G+GKSG IG K+A+TL+S GTP+FF+HAAE SHGDLGM+ R+D+ 
Sbjct: 50  AARCVAACSGRVVVSGLGKSGLIGRKIAATLSSLGTPAFFLHAAEGSHGDLGMVCREDVG 109

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           + LS SG + E+  ++ + RR   PLIAIT +  S +A  ADIVL    E E+ P GLAP
Sbjct: 110 LFLSNSGETREVLELVPFFRRLGAPLIAITGKEDSSLARVADIVLDSCVEREADPLGLAP 169

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
           T+S  +QLA+GDALA  +   +     DF + HPGG LG  L +   D+M + D +P V+
Sbjct: 170 TSSTTLQLALGDALAGMVTRLQGLVPEDFALFHPGGALGRRLLLRVGDLMGAEDRLPRVR 229

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
               + +A+  ++ K +G  AV D    L+G+ T+GD+ R   +   +  +L VE VM  
Sbjct: 230 TDATVREALFEITSKGYGATAVEDPQGFLRGVFTDGDLRRLLERRGPESLSLPVEQVMTP 289

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           NP+ I    L   A++L+ ++ +SVL+ VD   +A+GI+H  ++L+ G+
Sbjct: 290 NPRTIEPGRLAVEALRLMERNEVSVLLAVDPQGRAVGILHLHEVLKAGV 338


>gi|193213402|ref|YP_001999355.1| KpsF/GutQ family protein [Chlorobaculum parvum NCIB 8327]
 gi|193086879|gb|ACF12155.1| KpsF/GutQ family protein [Chlorobaculum parvum NCIB 8327]
          Length = 299

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/295 (42%), Positives = 182/295 (61%), Gaps = 3/295 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  AV+ +   KG+++I+G+GKSG IG K+A+TL+STGT + F+H AEA+HGDLG+
Sbjct: 5   LDESFAKAVDLMLESKGKIIISGMGKSGIIGQKIAATLSSTGTTAVFMHPAEAAHGDLGV 64

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +   D II LS SG ++EL  I+   R  +  +IA T   +S +A +A +VL    E E+
Sbjct: 65  VCEGDTIICLSKSGMTEELNFIIPALRERNATIIAFTGNTRSYLAMNAHVVLDTGVEQEA 124

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP+ LAPTTS    LA+GDALAI L++ +NF++ +F + HP G LG  L +   DVM +G
Sbjct: 125 CPYDLAPTTSTTAMLAMGDALAICLMKKKNFTDLEFALTHPKGSLGKQLTMRVGDVMATG 184

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SV 285
           D++PLV     + D I  ++ KR+G   VVD   KL GI T+GD+ R      + L  + 
Sbjct: 185 DALPLVSEDATVSDLILEITSKRYGVSGVVDAEGKLIGIFTDGDLRRLVQTGESFLDKTA 244

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +VM  NPK +  + +    ++LL    I+ LMV D+ Q+ +GIVH  DL+  G+
Sbjct: 245 AEVMTPNPKTVSAELMAKKCLELLETWRITQLMVCDEEQRPVGIVHIHDLVTLGL 299


>gi|126207871|ref|YP_001053096.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           L20]
 gi|126096663|gb|ABN73491.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 311

 Score =  220 bits (561), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 185/294 (62%), Gaps = 7/294 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F+ AVE +   +GRVV+ GIGKSG +G K+ +T ASTGTPSF++H  EA 
Sbjct: 19  SQLNQRLDGAFNQAVEMVLNCEGRVVVAGIGKSGLVGQKMVATFASTGTPSFYLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S SG +D++  +L   + F   +IA+T    S +A HA+++L +
Sbjct: 79  HGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKIIAMTGNPNSTLAQHANLILNI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F   DF   HPGG LG  L     
Sbjct: 139 GVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKAEDFARFHPGGSLGRKLLNRVK 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHK 278
           DVM +   +P+ +        +++++E R G VA++ +G++L+GIIT+GDI R    F  
Sbjct: 199 DVMQT--KLPIAQPNADFSTILSVMNEGRMG-VALIMQGEQLQGIITDGDIRRTLAQFGT 255

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           D    + E +M K+PK + ++T L  A +++++ +I  L+ ++D  K  GI+  
Sbjct: 256 DSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLIALNDEGKVSGIMEL 309


>gi|15892584|ref|NP_360298.1| kpsF protein [Rickettsia conorii str. Malish 7]
 gi|15619749|gb|AAL03199.1| kpsF protein [Rickettsia conorii str. Malish 7]
          Length = 319

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 115/287 (40%), Positives = 178/287 (62%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+ PE+    + PT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYPEASVIEV-PTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G        +M SGD IPLV         I I+S+KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDKNQNLVGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNIT 294


>gi|71909030|ref|YP_286617.1| KpsF/GutQ [Dechloromonas aromatica RCB]
 gi|71848651|gb|AAZ48147.1| KpsF/GutQ [Dechloromonas aromatica RCB]
          Length = 332

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 135/301 (44%), Positives = 182/301 (60%), Gaps = 3/301 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +LQG ++  F  AVE I    GR++++G+GKSGHI  K+A+T+ASTGTP++FVH AEASH
Sbjct: 32  ALQGRINGDFAKAVELILNSHGRLIVSGMGKSGHIARKIAATMASTGTPAYFVHPAEASH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMITRDD+++ LS SG S EL +IL   +R    +I++T    S +A  ADI L   
Sbjct: 92  GDLGMITRDDVLLALSNSGESGELLSILPALKRQGAKIISMTGVPTSTLAREADIHLDAG 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+CPH LAPT S    LA+GDALA+ALL++R F   DF   HPGG LG  L     D
Sbjct: 152 VEQEACPHNLAPTASTTAALALGDALAVALLDARGFGPEDFARSHPGGSLGRRLLTHVRD 211

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           VM + D +P V    P+ DAI  +S    G VA+ D    + GI T+GD+ R F K  DL
Sbjct: 212 VMRADDKVPAVTPATPITDAIIAMSRGGLGLVAITDPANIVLGIFTDGDLRRAFEKRIDL 271

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               +  VM   P+ I  D L   A++++ +  I+ L+VVD     IG ++  DL    +
Sbjct: 272 QQGDIASVMHAAPRTIGPDRLAVEAVEMMERLRINALLVVDAENHLIGALNMHDLFTAKV 331

Query: 341 I 341
           I
Sbjct: 332 I 332


>gi|238650253|ref|YP_002916104.1| arabinose-5-phosphate isomerase [Rickettsia peacockii str. Rustic]
 gi|238624351|gb|ACR47057.1| arabinose-5-phosphate isomerase [Rickettsia peacockii str. Rustic]
          Length = 319

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/287 (39%), Positives = 179/287 (62%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+  E+   G+ PT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYQEASVIGV-PTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV         I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDKNQNLVGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNIT 294


>gi|254037330|ref|ZP_04871407.1| KpsF/GutQ family protein [Escherichia sp. 1_1_43]
 gi|226840436|gb|EEH72438.1| KpsF/GutQ family protein [Escherichia sp. 1_1_43]
          Length = 332

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/296 (39%), Positives = 184/296 (62%), Gaps = 8/296 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A+  +   +GRV++TG+GK G+I  K+++TLASTGTPSF++H AEA+HGDLGM+T  
Sbjct: 38  FARAIRLLVDTRGRVIVTGMGKPGYIAHKISATLASTGTPSFYLHPAEAAHGDLGMVTSS 97

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+I+ LS SG + E+ A+L   +R  +P+I++     S +A H+D+ L+   + ESCP  
Sbjct: 98  DVILALSNSGETPEILALLPVLKRIGLPIISLCGNENSTLAKHSDVFLSAAVKQESCPLN 157

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           LAPT S  + L++GDA+A+ L+  R F + DF   HPGG LG  L     D+M SGD+  
Sbjct: 158 LAPTNSTTLSLSLGDAMAVILMNIRKFKKEDFAFYHPGGALGKRLLTTVRDIMKSGDNCC 217

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDV 288
            V     ++D +  ++  + G  +V+D   +L GI+T+GDI R    +   LN   V +V
Sbjct: 218 AVDQSTSILDTLFAMTSCKTGAASVMDARGELTGIVTDGDIRRYVMYNNLFLNN-PVTEV 276

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  +P  I ED L+ VA++ + Q++   +SVL V++  +K  GI++  D+L+ G +
Sbjct: 277 MTSSPVWIYEDELVEVAIRKMEQNSPSPVSVLPVLNRNRKVTGIINLADMLKSGFL 332


>gi|303252630|ref|ZP_07338793.1| hypothetical protein APP2_1608 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247389|ref|ZP_07529436.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307260862|ref|ZP_07542548.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|302648598|gb|EFL78791.1| hypothetical protein APP2_1608 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856086|gb|EFM88242.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306869429|gb|EFN01220.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 311

 Score =  220 bits (560), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/294 (40%), Positives = 183/294 (62%), Gaps = 7/294 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   L   F+ AVE I   +GRVV+ GIGKSG +G K+ +T ASTGTPSF++H  EA 
Sbjct: 19  NQLNQRLDSSFNQAVEMILNCEGRVVVAGIGKSGLVGQKMVATFASTGTPSFYLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S SG +D++  +L   + F   +IA+T    S +A HA+++L +
Sbjct: 79  HGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNQIIAMTGNPNSTLAQHANLILNI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R F   DF   HPGG LG  L     
Sbjct: 139 SVEREACPNNLAPTTSTLVTMALGDALAIALINARGFKAEDFARFHPGGSLGRKLLNRVK 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHK 278
           DVM +   +P+ +        +++++E R G VA++ + ++LKGIIT+GDI R    F  
Sbjct: 199 DVMQT--KLPITQPNADFSTILSVINEGRMG-VALIMQDEQLKGIITDGDIRRTLAKFGA 255

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +  T + E +M K PK I + T L  A +++++ +I  L+ ++D  K  GI+ F
Sbjct: 256 ESLTKTAEQIMSKQPKTISDTTYLAKAEEMMKELHIHSLIALNDEGKVSGIMEF 309


>gi|257454877|ref|ZP_05620128.1| arabinose 5-phosphate isomerase [Enhydrobacter aerosaccus SK60]
 gi|257447810|gb|EEV22802.1| arabinose 5-phosphate isomerase [Enhydrobacter aerosaccus SK60]
          Length = 322

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 183/295 (62%), Gaps = 3/295 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L  +F  A   I+  +GRVV+TG+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLG
Sbjct: 28  QLDERFVTACHLIENCQGRVVVTGMGKSGLIGRKIAATFASTGTPSFFMHPGEAGHGDLG 87

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+ + D++I +S SG SDE++ +L   ++  IPLI+I+ + + ++   AD+ LTL    E
Sbjct: 88  MLVKGDVLIGISNSGESDEIRTLLPVVKKLGIPLISISRDKRGILPKSADVALTLGASEE 147

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+S    LA+GDALA+AL+ S++F+  DF + HP G LG  L     D+MH 
Sbjct: 148 ACPLGLAPTSSTTATLALGDALAVALVHSKHFTSEDFALSHPAGALGRKLLTQVKDLMHV 207

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSV 285
            +++P +     L +A+  ++  R G   + +   ++ G+ T+GD+ R+  + L     +
Sbjct: 208 -NNLPTIDEHSTLNEALFSMTGGRLGMTVITNANNQVVGVFTDGDLRRSLARQLGLDTPI 266

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +VM  NPK +  D   + A+ L+ +  I+ L++++D +   GI+   +LL  G+
Sbjct: 267 SEVMSTNPKSVNPDMRASDALTLMNEQKINQLLIINDDKTLAGILTLHELLHAGV 321


>gi|254490066|ref|ZP_05103259.1| sugar isomerase, KpsF/GutQ family [Methylophaga thiooxidans DMS010]
 gi|224464730|gb|EEF80986.1| sugar isomerase, KpsF/GutQ family [Methylophaga thiooxydans DMS010]
          Length = 325

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 192/302 (63%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L+  ++  F  A + + A  GR+V+ G+GKSGHIG K+A+TLASTGTP+FFVH  EAS
Sbjct: 24  TALRERVNEHFLKACDFMLACSGRIVVIGMGKSGHIGGKIAATLASTGTPAFFVHPGEAS 83

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGD+GMIT  D+++ LS SG + E+  IL   +R  +PLIA++ +  S +A  A   + +
Sbjct: 84  HGDMGMITSKDVVLALSNSGETSEILTILPLIKRLGVPLIAMSGKPHSTLAKCASAHIDV 143

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-S 221
             E E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + HPGG LG   +   S
Sbjct: 144 SVEREACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDFAMSHPGGLLGRRLLLRVS 203

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           D+MH+G+ +P V+    + +A+  +S K  G  AV +   ++ GI T+GD+ R   +++N
Sbjct: 204 DIMHTGNDVPQVEESVLISEALIEMSAKGLGMTAVTNHQAEIIGIFTDGDLRRVLAQEIN 263

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  + + + +N K    D L   A++L+++  I+ L++ DD Q+  G ++  DLLR G
Sbjct: 264 IHTQPLSNYVSRNCKTGHPDMLAAEALELMQRFKINALLITDDKQQLQGAINMHDLLRAG 323

Query: 340 II 341
           ++
Sbjct: 324 VV 325


>gi|218887396|ref|YP_002436717.1| KpsF/GutQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758350|gb|ACL09249.1| KpsF/GutQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 333

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/300 (40%), Positives = 181/300 (60%), Gaps = 4/300 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++L+  L   F  A+  +   +GRVV+TG+GKSG +G KLA+TL+STGTP+FF+H  E +
Sbjct: 29  TALRDRLGPSFEAALALLAGCRGRVVVTGLGKSGLVGRKLAATLSSTGTPAFFLHPVEGA 88

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGD+G +  +D++I +S SG +DEL AIL   R     +IA+T + +S +   AD+VL  
Sbjct: 89  HGDMGSLRAEDVVIAISNSGETDELNAILPSLRAIGTSIIAMTGKAQSTLGRAADVVLDS 148

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
               E+CPH LAPT S    LA+GDALA+ L+  ++F+ENDF   HPGG LG  L +   
Sbjct: 149 GVPREACPHNLAPTASTTAVLALGDALAVCLIHWKSFTENDFLRYHPGGSLGQRLRLRVQ 208

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-- 279
           ++MH+   IP+ +      +A+ +L +  FG VAVVD   +L GI+T+GD+ R   +   
Sbjct: 209 ELMHT-TGIPVTQDDVGQEEAVRVLDKGGFGAVAVVDGSGRLMGILTDGDVRRAVIRGDY 267

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                V  +M  NP+    D  +   + ++ Q  I+VL +VDD  + +G++H  DLL  G
Sbjct: 268 APRTPVTAIMTCNPRSARSDQSVAELLDIMEQKAITVLPIVDDAHRLLGLIHLHDLLGKG 327


>gi|120603846|ref|YP_968246.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
 gi|120564075|gb|ABM29819.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
          Length = 331

 Score =  219 bits (559), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/314 (39%), Positives = 185/314 (58%), Gaps = 10/314 (3%)

Query: 35  KRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +RG   L+   +G       L   F  A+  +   +GRVV+TG+GKSG +G KLA+T +S
Sbjct: 13  QRGRDVLDIEAEGIRAVRDRLGPSFEAALALLAGCRGRVVVTGLGKSGLVGRKLAATFSS 72

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG+P+FF+H  E +HGD+G +  DD++I +S SG +DEL AIL   R    P+IA+T   
Sbjct: 73  TGSPAFFLHPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGTPIIALTGRA 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   ADIVL      E+CP GLAPT S    LA+GDALA+ L++ ++F+ENDF   H
Sbjct: 133 DSSLGRGADIVLDCGVPREACPLGLAPTASTTAVLALGDALAVCLIDWKSFTENDFLRYH 192

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +  +++MH+ + IP+V       +A+  L +  FG VA+ D G +L GI+
Sbjct: 193 PGGSLGQRLRLRVAELMHT-EGIPVVNEEAVCEEAVLALDKGGFGAVALTDGGGRLTGIL 251

Query: 268 TEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R   +      + V  +M +NP+   +   +   + ++ Q  I+VL + DD  +
Sbjct: 252 TDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVLPITDDDHR 311

Query: 326 AIGIVHFLDLLRFG 339
            +G+VH  DLL  G
Sbjct: 312 LVGLVHLHDLLGKG 325


>gi|319940823|ref|ZP_08015162.1| capsule expression protein KpsF/GutQ [Sutterella wadsworthensis
           3_1_45B]
 gi|319805705|gb|EFW02486.1| capsule expression protein KpsF/GutQ [Sutterella wadsworthensis
           3_1_45B]
          Length = 330

 Score =  219 bits (559), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 124/288 (43%), Positives = 180/288 (62%), Gaps = 3/288 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV+ I   +GR+V++G+GKSGHIG KLA+T ASTGTP+FFVHA EA+HGDLGMIT 
Sbjct: 38  DFAQAVKAILGCRGRLVVSGVGKSGHIGRKLAATFASTGTPAFFVHAGEAAHGDLGMITS 97

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++ +S+SG + EL  I+   +R    LIA+T   +S +A HAD+ +    + E+CP 
Sbjct: 98  EDIVLGISYSGETQELLMIVPILKREGAILIAMTGNPESTLAQHADLHINCHVDREACPL 157

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPT+S    LA+GDALA+A L ++ FS+ DF   HPGG LG  L +   D+M +GD +
Sbjct: 158 NLAPTSSTTTTLALGDALAVACLSAKGFSQEDFARSHPGGALGRRLLLHVRDIMRTGDEL 217

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     ++DA+  +++K  G  AVVD   ++ GI TEGD+ R   +  D+  + + DV
Sbjct: 218 PRVTADVRVLDAVREITKKHIGMTAVVDSDNRVIGIFTEGDLRRLIERMGDVRDVIMRDV 277

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +P  I  D L   A++ L     + L+VVD     +G +H  DL+
Sbjct: 278 MTPSPHTISPDELAAAAVKALEAFQCNQLLVVDADNHLVGALHMHDLM 325


>gi|46578577|ref|YP_009385.1| carbohydrate isomerase KpsF/GutQ family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46447988|gb|AAS94644.1| carbohydrate isomerase, KpsF/GutQ family [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311232501|gb|ADP85355.1| KpsF/GutQ family protein [Desulfovibrio vulgaris RCH1]
          Length = 331

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/314 (39%), Positives = 185/314 (58%), Gaps = 10/314 (3%)

Query: 35  KRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +RG   L+   +G       L   F  A+  +   +GRVV+TG+GKSG +G KLA+T +S
Sbjct: 13  QRGRDVLDIEAEGIRAVRDRLGPSFESALALLAGCRGRVVVTGLGKSGLVGRKLAATFSS 72

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG+P+FF+H  E +HGD+G +  DD++I +S SG +DEL AIL   R    P+IA+T   
Sbjct: 73  TGSPAFFLHPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGTPIIALTGRA 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   ADIVL      E+CP GLAPT S    LA+GDALA+ L++ ++F+ENDF   H
Sbjct: 133 DSSLGRGADIVLDCGVPREACPLGLAPTASTTAVLALGDALAVCLIDWKSFTENDFLRYH 192

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +  +++MH+ + IP+V       +A+  L +  FG VA+ D G +L GI+
Sbjct: 193 PGGSLGQRLRLRVAELMHT-EGIPVVNEEAVCEEAVLALDKGGFGAVALTDGGGRLTGIL 251

Query: 268 TEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R   +      + V  +M +NP+   +   +   + ++ Q  I+VL + DD  +
Sbjct: 252 TDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVLPITDDDHR 311

Query: 326 AIGIVHFLDLLRFG 339
            +G+VH  DLL  G
Sbjct: 312 LVGLVHLHDLLGKG 325


>gi|329121347|ref|ZP_08249973.1| arabinose 5-phosphate isomerase [Dialister micraerophilus DSM
           19965]
 gi|327469756|gb|EGF15222.1| arabinose 5-phosphate isomerase [Dialister micraerophilus DSM
           19965]
          Length = 323

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 183/302 (60%), Gaps = 6/302 (1%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
           +  L   F    E I  IKGRV++TG+GKSG I  K+ASTLASTGTP+FF+H  EA HGD
Sbjct: 22  EKSLDKHFKKVAELILNIKGRVILTGMGKSGQIAGKIASTLASTGTPAFFLHPGEAIHGD 81

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           LG IT  D++ +LS SG ++E+  ++    +    +I +T    S +A  AD+VL +  +
Sbjct: 82  LGKITSYDIVFMLSNSGETEEIINLIPSIEKIGATVIVMTGCKNSTLAQKADVVLPVVIK 141

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVM 224
            E+    + PT+S+   LAIGDALAI L++ ++F+   F + HPGG LG  + +    +M
Sbjct: 142 KEADEFNMVPTSSSTTMLAIGDALAITLMKLKSFTSEHFALYHPGGTLGKKMLMTVKQIM 201

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT 282
           HSG   P VK    + +A+ +++ K  G V+++DE  KLKGI+T+GDI R    H D   
Sbjct: 202 HSGKDNPAVKPKLTVQEALFVMTAKGLGAVSIIDEKGKLKGILTDGDIRRGLEKHADFLK 261

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLRFG 339
             V++VMIKNP  +    L+  A++L++ H  + + V+  C+K     G++H  DLL+ G
Sbjct: 262 FEVKEVMIKNPITVHPSQLVVDAIELMKSHKPNPVTVLPVCEKDGYVCGMIHLTDLLKQG 321

Query: 340 II 341
           ++
Sbjct: 322 VL 323


>gi|154174038|ref|YP_001407360.1| arabinose 5-phosphate isomerase [Campylobacter curvus 525.92]
 gi|112802435|gb|EAT99779.1| arabinose 5-phosphate isomerase [Campylobacter curvus 525.92]
          Length = 320

 Score =  219 bits (558), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 118/303 (38%), Positives = 192/303 (63%), Gaps = 11/303 (3%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L GE+      AV  +   KG+V++TG+GKSGHIG+K+A+TLASTGTPSFF+H  EA 
Sbjct: 24  SNLGGEI----EEAVNLMYNTKGKVIVTGVGKSGHIGAKIAATLASTGTPSFFIHPTEAM 79

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI ++D+++ +S+SG SDEL  IL + +RF + +I++     S +   +D  + L
Sbjct: 80  HGDLGMIDKNDVVLAISFSGESDELVKILPHVKRFGVKIISMARSKASSLGKFSDAFICL 139

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
               E+CP  +APT S  + LA+GDALA+ L++ R F + DF   HPGG LG  LF+   
Sbjct: 140 DIVREACPLNVAPTASTTLTLALGDALAVCLMKRRGFKKEDFANFHPGGSLGKRLFLKVK 199

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
           DVM S +++P+V     L +AI  ++  + G V +V+   +L  ++++GD+ R       
Sbjct: 200 DVMRS-ENLPIVSDDVSLKNAIDTMTHGKLGNVLLVNLKGELVAVLSDGDLRRALMSEKF 258

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D+N  +++    K+PK + +  +L + A++L+ ++ I +L+VVD+  + IG++H  +L  
Sbjct: 259 DINEKAIK-YATKSPKTLSDPEMLAIDALKLIEEYKIQILIVVDNAHRPIGVLHIHNLAN 317

Query: 338 FGI 340
            G+
Sbjct: 318 LGL 320


>gi|157828535|ref|YP_001494777.1| kpsF protein [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933251|ref|YP_001650040.1| arabinose-5-phosphate isomerase [Rickettsia rickettsii str. Iowa]
 gi|157801016|gb|ABV76269.1| kpsF protein [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908338|gb|ABY72634.1| arabinose-5-phosphate isomerase [Rickettsia rickettsii str. Iowa]
          Length = 319

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 179/287 (62%), Gaps = 4/287 (1%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           I  KR +SS  S+L+     +   F+  +E + + KGR+++TGIGKSG+I  K+A++ +S
Sbjct: 9   IIAKRVISSEASALEKLSENIPEDFNRIIEFLLSFKGRIILTGIGKSGYIARKIAASFSS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG P+F++H AEASHGDLGM+TR+D++I+LS SG + EL  I+ Y +  SI + A+T   
Sbjct: 69  TGMPAFYLHPAEASHGDLGMVTRNDIVIMLSNSGETKELFNIIEYCKNSSIKIAAMTMNK 128

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  +D +L +P+  E+   G+ PT S+++ L++GDAL   + E R F+++DF + H
Sbjct: 129 NSTLAKRSDFLLIVPEYQEASVIGV-PTISSLIMLSLGDALMTVIHEKRGFTKDDFKIYH 187

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG +G       ++M SGD IPLV         I I+++KR GC  V D+ Q L GIIT
Sbjct: 188 PGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDKNQNLVGIIT 247

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+
Sbjct: 248 DGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNIT 294


>gi|34556521|ref|NP_906336.1| hypothetical protein WS0067 [Wolinella succinogenes DSM 1740]
 gi|34482235|emb|CAE09236.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 322

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 123/296 (41%), Positives = 191/296 (64%), Gaps = 5/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           +S  F  A++ ++  +G+V+I G+GKSG IG+K+A+TLASTGTPSFF+H  EA HGDLGM
Sbjct: 27  ISTDFSKALDLMQFCRGKVIIMGVGKSGLIGAKIAATLASTGTPSFFIHPTEAMHGDLGM 86

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I ++D+++ +S+SG S EL AIL + +RF IPLI ++   +S ++   D  +++  E E+
Sbjct: 87  IGKEDVVLAISYSGESGELVAILPHLKRFGIPLITMSQNPQSSLSKVGDAFISIWIEREA 146

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP   APT S  + LA+GDALA+ L+E R F E DF   HPGG LG  LFV  +D+M S 
Sbjct: 147 CPLNAAPTCSTTLTLALGDALAVCLMERRGFKECDFASFHPGGSLGRRLFVKVTDLMQS- 205

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE- 286
           +++PL+    PL +AI  +S+ R G   +VDE  +L G++++GD+ R   ++   LS + 
Sbjct: 206 ENLPLIPPHLPLKEAIVKMSDGRLGNAIIVDEEGRLTGVLSDGDLRRAMMREEFNLSAKA 265

Query: 287 -DVMIKNPKVILEDTLLTVA-MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            D   KNPK   ++T+L    ++ + ++ I +L++ D  ++  G VH   L+  GI
Sbjct: 266 IDYATKNPKYCDDETILASEILRYIEENKIQLLVITDKEKRVKGAVHLHKLIEAGI 321


>gi|225010695|ref|ZP_03701165.1| KpsF/GutQ family protein [Flavobacteria bacterium MS024-3C]
 gi|225005248|gb|EEG43200.1| KpsF/GutQ family protein [Flavobacteria bacterium MS024-3C]
          Length = 321

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/327 (39%), Positives = 201/327 (61%), Gaps = 13/327 (3%)

Query: 21  NST---VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           NST   ++ A+R+   E+  L ++   L    +  F  AV+ I    GRVVITGIGKS  
Sbjct: 2   NSTPKILESAVRTFQIERDALDAIIPLL----NTAFEKAVQTILQSTGRVVITGIGKSAI 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +T+ STGTP+ F+HAA+A HGDLG I   D +I +S SG++ E+K ++   +R 
Sbjct: 58  IANKIVATMNSTGTPAIFMHAADAIHGDLGTIQNGDPVICISKSGNTPEIKVLVPLLKRG 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             PLIAIT    S +A HAD VL      E+CP+ LAPTTS   QL +GDA+AI LLE +
Sbjct: 118 QNPLIAITGNTDSFLAQHADFVLNTYVAKEACPNNLAPTTSTTAQLVMGDAIAICLLELK 177

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   DF   HPGG LG  L++  SD++ + ++ P+V     + + I  +S+K  G  AV
Sbjct: 178 EFGSKDFAQYHPGGALGKKLYLRVSDLVKN-NATPMVTPQTKVKEVIMEISKKLLGAAAV 236

Query: 257 VDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V EG  + G++T+GDI R  N H ++  L  +D+M  +PK I ++ +   A++++++++I
Sbjct: 237 V-EGNTIVGVVTDGDIRRMLNKHDNIAALCAKDIMSHSPKTISQEAMAVEALKIMQENHI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+ V +  K +GIVH  +L++ G++
Sbjct: 296 TQLLAVHE-NKYVGIVHLHNLIQEGLL 321


>gi|218507376|ref|ZP_03505254.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli Brasil 5]
          Length = 182

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 106/182 (58%), Positives = 139/182 (76%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IA 192
           +A
Sbjct: 181 VA 182


>gi|294102476|ref|YP_003554334.1| KpsF/GutQ family protein [Aminobacterium colombiense DSM 12261]
 gi|293617456|gb|ADE57610.1| KpsF/GutQ family protein [Aminobacterium colombiense DSM 12261]
          Length = 335

 Score =  219 bits (557), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 129/297 (43%), Positives = 179/297 (60%), Gaps = 5/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           E+  +   A   I   KGR+V+ G+GKSG IG K+A+TLAS GTPSFF+HAAEASHGDLG
Sbjct: 39  EMGQEIVKAARVIHCSKGRLVVIGMGKSGLIGRKIAATLASLGTPSFFLHAAEASHGDLG 98

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+ R+D+ + +S SG + E+ A+L + RR   P+I+IT    S +A ++DIVL      E
Sbjct: 99  MVCREDVGLFISNSGKTKEVVALLPFFRRLGAPVISITGGISSPLAKNSDIVLNSSVSRE 158

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           + P  LAPT+S  +QLAIGDALA  + E R   E+DF + HPGG LG  L     DVM S
Sbjct: 159 ADPLNLAPTSSTTVQLAIGDALAGMVTELRGLEEDDFALFHPGGALGRRLLTKVEDVMGS 218

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
           GD +P+V     + DA+  ++ K +G   +VDE  KL GI T+GD+ R   +   +    
Sbjct: 219 GDKLPVVIEHVKVSDALFEMTSKGYGATLIVDEEGKLAGIFTDGDLRRLIERCGVECLES 278

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V   M KNP  +    L   A+ ++ +  ISVL+V     K IGI+H  +LL+ G+
Sbjct: 279 DVSSAMTKNPVTLEAGRLAAEAVHIMEEREISVLIVA-KAGKPIGIIHLHELLKAGV 334


>gi|87120716|ref|ZP_01076609.1| KpsF/GutQ family protein [Marinomonas sp. MED121]
 gi|86163944|gb|EAQ65216.1| KpsF/GutQ family protein [Marinomonas sp. MED121]
          Length = 332

 Score =  219 bits (557), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/312 (40%), Positives = 188/312 (60%), Gaps = 10/312 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++  +   L+ L  S+  E    F  A++ I   +GR +I G+GKSG IG+K+A+TL
Sbjct: 26  AQHTLTTQANALAKLADSITQE----FADAIKLIMKTQGRTIICGMGKSGLIGAKIAATL 81

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H  EA HGDLGM+   D +I++S+SG ++EL  +L   + F    IA+  
Sbjct: 82  ASTGTPSFFLHPGEAFHGDLGMVEPQDTLILISYSGETEELIRLLPSLKSFGNACIAMVG 141

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
            ++S +A H D VL +  + E+CP+ LAPTTS  M  A+GDALA+AL+E R+F   DF  
Sbjct: 142 NSQSTLAKHCDCVLDISVDRETCPNNLAPTTSTTMTTAMGDALAVALMECRDFKPQDFAR 201

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     D+MH  D++P      PL +AI +++  R G V +V +G  L G
Sbjct: 202 FHPGGSLGRKLLTRVKDLMHK-DNLPECHPDTPLKEAIAVMTAGRMGMV-LVKQGDDLLG 259

Query: 266 IITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I T+GD+ R    D  ++   ++  VM  +PK I +DTL+  A + + Q  I++L+ VDD
Sbjct: 260 IFTDGDLRRAMLADAASMMDKTLSKVMTASPKTIHQDTLIVNAEEQMLQDKITLLIAVDD 319

Query: 323 CQKAIGIVHFLD 334
             K +G++   D
Sbjct: 320 DNKVVGLLEIYD 331


>gi|332288188|ref|YP_004419040.1| D-arabinose 5-phosphate isomerase [Gallibacterium anatis UMN179]
 gi|330431084|gb|AEC16143.1| D-arabinose 5-phosphate isomerase [Gallibacterium anatis UMN179]
          Length = 311

 Score =  218 bits (556), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 126/313 (40%), Positives = 197/313 (62%), Gaps = 11/313 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A  ++  E++ L+ L    Q +L   F   VE I   +GR+VI GIGKSG +G K+ 
Sbjct: 4   LQIAKDTLAIEQQALTRL----QQQLPENFQQIVELILHCQGRLVIGGIGKSGLVGKKIV 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +IA
Sbjct: 60  ATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVLLISYSGETDDVNKLIPSLKNFGNKIIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A HAD VL +  E E+CP+ LAPTTS ++ +A+GDALA++L+++R+F   D
Sbjct: 120 MTGNLQSTLAKHADYVLDISVEREACPNNLAPTTSVLVTMALGDALAVSLIKARHFQAED 179

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG   +C   D M +  ++P+V      +D +T+++E R G VA++ + +K
Sbjct: 180 FAKFHPGGSLGRRLLCKVRDKMQT--TLPVVHANTLFLDCLTVMNEGRMG-VALIMQDKK 236

Query: 263 LKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L+GIIT+GDI R   +   T+     +D M   PK I +++ L  A   +RQ+ I  L+V
Sbjct: 237 LQGIITDGDIRRAMSRYGETVLQKQAQDFMTVTPKTINQNSYLGQAEDFMRQNKIHSLVV 296

Query: 320 VDDCQKAIGIVHF 332
           VDD Q+ +G+  F
Sbjct: 297 VDDQQQVVGLYEF 309


>gi|269120423|ref|YP_003308600.1| KpsF/GutQ family protein [Sebaldella termitidis ATCC 33386]
 gi|268614301|gb|ACZ08669.1| KpsF/GutQ family protein [Sebaldella termitidis ATCC 33386]
          Length = 319

 Score =  218 bits (556), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 126/299 (42%), Positives = 181/299 (60%), Gaps = 7/299 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++  L   F   V+ I    G+VVITGIGKSGHIG K+++TLASTGT S F++AAEA HG
Sbjct: 22  VKDRLDENFSKMVDMIYESSGKVVITGIGKSGHIGKKISATLASTGTNSVFINAAEALHG 81

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG+I + D+++ +S SG+SDE+  IL   RR    +IA T    S +   AD+++ +  
Sbjct: 82  DLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGADIIAFTGNKISALGKEADLIINIAI 141

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP GLAP TSA + L +GDALA AL++ R+F   ++ V HPGG LG  L +   D+
Sbjct: 142 DKEACPMGLAPMTSATVTLVMGDALAAALMQKRDFKPENYAVYHPGGSLGRRLLLKVKDL 201

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD-LN 281
           MH  D +P +     +   +  L++K+ G V +  E  +L GIITEGDI R   HK+   
Sbjct: 202 MHKNDELPKLTKDTHIDTVLMELTKKKMGAVCIA-EDDRLIGIITEGDIRRALTHKEKFF 260

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + EDVM KNP  +  +     A++ +  R+  I+VL VVD+  K +GI+   DLL  
Sbjct: 261 DYTAEDVMTKNPVYVTPEIQAIEALEKMEARESQITVLPVVDN-DKLVGIIRIHDLLNL 318


>gi|327398683|ref|YP_004339552.1| KpsF/GutQ family protein [Hippea maritima DSM 10411]
 gi|327181312|gb|AEA33493.1| KpsF/GutQ family protein [Hippea maritima DSM 10411]
          Length = 322

 Score =  218 bits (556), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 180/302 (59%), Gaps = 4/302 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   +   F  AVE I   +GRV+ +GIGKSG +  K++ST +S G PS FVH AEA+H
Sbjct: 21  SLSKRIDSSFLEAVELIDGCEGRVIFSGIGKSGLVAKKISSTFSSIGIPSMFVHPAEAAH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI +DD+ I+LS SGS+ E+  +L   +RF + +I+I     S +A  +D+VL   
Sbjct: 81  GDLGMIRKDDVAILLSNSGSTPEVLFLLPMLKRFGLKIISIVGNVNSELAKRSDVVLDSS 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+    L PT+S    L IGDALA  L+  R+F E DF  LHPGG +G  L V   D
Sbjct: 141 VEQEATSVSLVPTSSTTTALVIGDALAAGLIVKRDFKEEDFAFLHPGGAIGKKLLVRVED 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +MHSG  +P+V         I  +S KR G   VV++  +L G+IT+GD+ R   K  ++
Sbjct: 201 LMHSGGDVPVVGKDESFEKLIYEISSKRLGMTTVVNDKGELIGVITDGDLRRAIEKYKDS 260

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L     +D+M KNPK I   +L   A  ++  ++I+ L+V++D  +  G++H  D+L+ G
Sbjct: 261 LFKIKAKDIMNKNPKTIDRFSLAAKAANIMESYSITSLVVIEDNGRIEGVIHMHDILKAG 320

Query: 340 II 341
           ++
Sbjct: 321 VL 322


>gi|319954188|ref|YP_004165455.1| kpsf/gutq family protein [Cellulophaga algicola DSM 14237]
 gi|319422848|gb|ADV49957.1| KpsF/GutQ family protein [Cellulophaga algicola DSM 14237]
          Length = 321

 Score =  218 bits (556), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 131/328 (39%), Positives = 193/328 (58%), Gaps = 12/328 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+T  +  A R+I  E   + +L S L       F   +  I    GR++I+GIGKS 
Sbjct: 1   MKNNTAILDIARRTIENEANAIQNLSSLLDA----NFANTINHILNSTGRIIISGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I SK+ +TL STGTP+ F+HAA+A HGDLG +  +D +I +S SG++ E+K ++   ++
Sbjct: 57  LIASKIVATLNSTGTPAIFMHAADAIHGDLGTVQENDTVICISKSGNTPEIKMLVPLIKK 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T    SV+A  ++ +L    E E+CP+ LAPTTS   QL +GDALA+ LLE 
Sbjct: 117 TGNTLIAMTGNLDSVLAKQSNYILNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLEL 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R FS  DF   HPGG LG  L++  SD++ + +  P V +   +   I  +S K  G  A
Sbjct: 177 RGFSSKDFAKFHPGGSLGKRLYLRVSDIVEN-NMKPQVTVNSDVKQVIVEISAKMLGVTA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+ E  K+ GI+T+GDI R  N + D+  L+  D+M  NPK I  D L   A++L++  N
Sbjct: 236 VL-ENNKIVGIVTDGDIRRMLNKYDDIKGLTARDIMSANPKTIENDALAVKALELMQAKN 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           IS L+ +++     GIVH  +L+  GI+
Sbjct: 295 ISQLISIENGTYK-GIVHIHNLINEGIL 321


>gi|213618599|ref|ZP_03372425.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 293

 Score =  218 bits (555), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 117/259 (45%), Positives = 163/259 (62%), Gaps = 7/259 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +    +  F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYI----NQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+
Sbjct: 199 GRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDL 258

Query: 273 FRNFH--KDLNTLSVEDVM 289
            R F    D+  L + +VM
Sbjct: 259 RRMFDMGGDMRQLGIAEVM 277


>gi|74316556|ref|YP_314296.1| capsule expression protein KpsF/GutQ [Thiobacillus denitrificans
           ATCC 25259]
 gi|74056051|gb|AAZ96491.1| capsule expression protein KpsF/GutQ [Thiobacillus denitrificans
           ATCC 25259]
          Length = 328

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/297 (44%), Positives = 182/297 (61%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AV  I A  GRVV++G+GKSGH+GSK+A+TLASTGTP+FF+H  EASHGDLG
Sbjct: 32  RLDHGFADAVRLILACTGRVVVSGMGKSGHVGSKIAATLASTGTPAFFMHPGEASHGDLG 91

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI  DD+++ LS SG S E+  I+   +R    L+A+T    S +A  AD  L    + E
Sbjct: 92  MIAHDDVVLALSNSGESSEIVCIVPLIKRRGAKLVAMTGNPASTLAREADAHLNAKVDKE 151

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S    LA+GDALA+ALL++R FS +DF   HPGG LG  L V  +DVMH 
Sbjct: 152 ACPLNLAPTASTTAALALGDALAVALLDARGFSADDFARTHPGGSLGRRLLVHVADVMHG 211

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           GD++P V     L  A+  +++K  G  AVVD   ++ G+ T+GD+ R      D+    
Sbjct: 212 GDALPKVGRDATLKAALFEMTKKGLGMTAVVDADDRVVGLFTDGDLRRTLEHALDIQHAK 271

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + D+M  NPK I  D L   A++ +    I+ L+VVD   + +G ++  DLL+ G++
Sbjct: 272 IADLMTPNPKTIRADELAAAAVEKMETLKINGLLVVDADNRLVGALNMHDLLKAGVV 328


>gi|224418004|ref|ZP_03656010.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|253827339|ref|ZP_04870224.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|313141547|ref|ZP_07803740.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510745|gb|EES89404.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|313130578|gb|EFR48195.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 313

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/295 (40%), Positives = 183/295 (62%), Gaps = 4/295 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  L+  F+  +E I  +KG  VITG+GKSGHI +K+A+TLASTGTPSFF+H  EA HG
Sbjct: 22  LKEHLNQDFNGVIECILKLKGHCVITGMGKSGHIAAKIAATLASTGTPSFFLHPGEALHG 81

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T++D +I +S SG S+E+  I+   ++ +IPLI ++   +S +A      L +  
Sbjct: 82  DLGMLTKEDAVIAISNSGESEEVLRIIPLIKKRAIPLIVMSGNPQSTLAKEGQYFLNIAV 141

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP  LAPT+S    LA+GDA+A+AL+++R F   +F + HPGG LG  L     D+
Sbjct: 142 KREACPLQLAPTSSTTANLAMGDAIAVALMKARGFKPENFAMFHPGGSLGRKLLTQVKDI 201

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M + D +P+V       D I  ++ KR G V +V E  +L+GIIT+GD+ R   ++   +
Sbjct: 202 MVTQD-LPIVSPQTSFKDLIAEMTSKRLG-VCLVLENHRLQGIITDGDLRRTLMENKFEV 259

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M K PKVI  + + T A  ++ +  I  L+V+D   + +GIV   ++ R 
Sbjct: 260 CAEEIMTKQPKVIQSNAMATQAEAIMMESKIKELVVMDG-NEVVGIVQLYEVGRI 313


>gi|288572977|ref|ZP_06391334.1| KpsF/GutQ family protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568718|gb|EFC90275.1| KpsF/GutQ family protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 335

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 118/289 (40%), Positives = 187/289 (64%), Gaps = 5/289 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A   ++  +GR+VI+G+GKSGHIG K+A+TLAS GTPSFF+HAAEA+HGDLGM+ R+D+ 
Sbjct: 47  AARIVQGCRGRLVISGLGKSGHIGRKIAATLASLGTPSFFLHAAEAAHGDLGMVRREDVA 106

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            ++S SG++ E+  ++ + RR   P+IA+T   +S +A  AD++L    E E+ P  LAP
Sbjct: 107 FLISHSGTTSEVVKLIPFFRRLGAPVIALTGSLESPLAKGADVILNASVEREADPLNLAP 166

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVK 234
           T+S  +QLAIGDALA  + E R   + DF + HP G LG  L +  SDVM +G  +P+VK
Sbjct: 167 TSSTTVQLAIGDALAGVVTEMRCLRKEDFALFHPAGALGRQLLLKVSDVMGAGPKLPVVK 226

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTL--SVEDVMIK 291
               + +A+  ++ K +G   VVD+   L G+ T+GD+ R   +  ++ L  ++ DVM  
Sbjct: 227 ADVAVKEALFEITSKNYGATTVVDDQGILVGVFTDGDLRRLIERQGVSALEENISDVMTV 286

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            P+ I  D L   A+++++   +SVL++ ++  + +G+VH  +LL+ G+
Sbjct: 287 GPRTIGPDHLAVEAVRIMQDVEVSVLIITEE-DRPVGMVHLHELLQAGL 334


>gi|33152280|ref|NP_873633.1| arabinose-5-phosphate isomerase [Haemophilus ducreyi 35000HP]
 gi|33148503|gb|AAP96022.1| arabinose-5-phosphate isomerase [Haemophilus ducreyi 35000HP]
          Length = 311

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/292 (41%), Positives = 182/292 (62%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           LQ  L   F+ AVE I    GRVV+ GIGKSG +G K+ +T ASTGTPSF++H  EA HG
Sbjct: 21  LQHNLDQHFNQAVEMILNCAGRVVVAGIGKSGLVGKKMVATFASTGTPSFYLHPTEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S SG +D++  +L   + F   +IA+T    S +A HAD+VL +  
Sbjct: 81  DLGMLKAIDIVLLISNSGETDDVIKLLPSLKNFGNQIIAMTGNRHSTLAQHADLVLDISV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP+ LAPTTS ++ +A+GDALAIAL+++R+F  +DF   HPGG LG  L     DV
Sbjct: 141 EREACPNNLAPTTSTLVTMALGDALAIALIKARDFKAHDFARFHPGGSLGRKLLNRVKDV 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDL 280
           M +   +P+          +++++E R G +A++ +G++L GIIT+GDI R    F    
Sbjct: 201 MQT--KLPITSPTADFSTILSVMNEGRMG-LALIMQGEQLCGIITDGDIRRTLAQFGATS 257

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + E +M K PK IL+   L  A ++++  +I  L+ V+D  +  GI+ F
Sbjct: 258 LSKTAEQIMTKKPKTILDSVYLAKAEEMMKALHIHSLIAVNDIGQVSGILEF 309


>gi|163803750|ref|ZP_02197607.1| putative polysialic acid capsule expression protein [Vibrio sp.
           AND4]
 gi|159172434|gb|EDP57303.1| putative polysialic acid capsule expression protein [Vibrio sp.
           AND4]
          Length = 323

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/293 (40%), Positives = 187/293 (63%), Gaps = 4/293 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF  A + I +  G+VV+ G+GKSGHIG+K+A+TLASTGT +FFVH  EA+HGDLGMI+ 
Sbjct: 32  QFEQACDLILSNNGKVVVMGMGKSGHIGTKIAATLASTGTSAFFVHPGEAAHGDLGMISA 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ ++    +R +I +I++T +  S +A  +D+ L +    E+CP 
Sbjct: 92  GDIVIAISNSGESHEILSLFPVLKRLNIKIISMTGKPASNMAKLSDLHLQITVPKEACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSI 230
           GLAPT+S    L +GDALA+ALL++R F   DF + HP G     L +  SD+MH G+++
Sbjct: 152 GLAPTSSTTATLVMGDALAVALLQARGFRAEDFALSHPGGTLGKKLLLKLSDIMHFGNAL 211

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     + DA+  +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++++V
Sbjct: 212 PKVPPNALIRDALLEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTTIDEV 271

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M ++P     + L    + L++  NI+ L++ DD  K +G ++  DLL+ G++
Sbjct: 272 MTQSPTTAHPEMLAVEGLNLMQDKNINALILCDD-NKIVGALNMHDLLKAGVM 323


>gi|322514597|ref|ZP_08067630.1| arabinose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
 gi|322119536|gb|EFX91623.1| arabinose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
          Length = 311

 Score =  218 bits (555), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 119/294 (40%), Positives = 183/294 (62%), Gaps = 7/294 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   L   F+ A+E I   +GRVV+TGIGKSG +G K+ +T ASTGTPSF++H  EA 
Sbjct: 19  NQLNQRLDGTFNQAIEMILNCEGRVVVTGIGKSGLVGQKMVATFASTGTPSFYLHPTEAF 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I++S SG +D++  +L   + F   +IA+T    S +A +A++ L +
Sbjct: 79  HGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNTIIAMTGNPHSTLAQYANLTLNI 138

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R F   DF   HPGG LG  L     
Sbjct: 139 GVEREACPNNLAPTTSTLVTMALGDALAIALINARGFKTEDFARFHPGGSLGRKLLNRVK 198

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHK 278
           DVM +   +P+ +        +++++E R G VA++ + + L+GIIT+GDI R    F  
Sbjct: 199 DVMQT--KLPIAQPNADFSTILSVMNEGRMG-VALIMQNEDLQGIITDGDIRRTLAQFGA 255

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              T + E +M KNPK I ++T L  A +++++ +I  L+ ++D  K  GI+ F
Sbjct: 256 GSLTKTAEQIMSKNPKTISDNTYLAKAEEMMKELHIHSLIALNDEGKVSGIMEF 309


>gi|268678706|ref|YP_003303137.1| KpsF/GutQ family protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268616737|gb|ACZ11102.1| KpsF/GutQ family protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 321

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 115/282 (40%), Positives = 183/282 (64%), Gaps = 5/282 (1%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           +KG++++TG+GKSG IG+K+A+TLASTGT SFF+H  EA HGDLGMI ++D ++ +S+SG
Sbjct: 40  LKGKLIVTGVGKSGLIGAKIAATLASTGTSSFFLHPTEALHGDLGMIGKEDAVLAISYSG 99

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            S+EL  IL + +RF+IPLI +    +S +  ++DI + L  + E+CP   APT+S  + 
Sbjct: 100 ESEELIKILPHIKRFNIPLIGMARTKESSLGRYSDIFIPLHVKKEACPLDAAPTSSTTLT 159

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ L++ ++F + DF   HPGG LG  LFV   D+M   +++P+V+    L D
Sbjct: 160 LALGDALAVCLMKKKDFQKEDFASFHPGGSLGKRLFVKVQDLMLK-ENLPIVQKETKLKD 218

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILED 299
           AI  +SE R G V + D+   L  ++++GD+ R   +D  ++  S  +   KNPK + ++
Sbjct: 219 AILKMSEGRLGNVLITDKNNVLLAVLSDGDLRRALMRDDFSMDASAYEYASKNPKRLEDE 278

Query: 300 TLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           TLL + A+  + +H I +L + D+     G++H   L+  GI
Sbjct: 279 TLLASDALAFIEKHKIQLLAITDNVGMLKGVLHIHHLVEAGI 320


>gi|317152918|ref|YP_004120966.1| KpsF/GutQ family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316943169|gb|ADU62220.1| KpsF/GutQ family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 343

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 183/301 (60%), Gaps = 4/301 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++ G+L   F  A+  +   +GRVVITGIGKSG +G K+A+TL+STGTP+FF+H  E +H
Sbjct: 27  TVSGQLGDGFVRALTLMAECRGRVVITGIGKSGLVGRKIAATLSSTGTPAFFLHPVEGAH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+GMI  +D+++ LS SG SDE+ AI+   R     +IA+T    S +A  ADI + + 
Sbjct: 87  GDMGMIRSEDVVLALSNSGGSDEVNAIIPTLRSLGATVIAMTGNTASAMAELADITIEVR 146

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
              E+CP GLAPT+S    LA+GDALA+ L+E ++F ++DF   HPGG LG  L +C   
Sbjct: 147 VPREACPMGLAPTSSTTAHLAVGDALAVCLMEWKSFGQDDFRKFHPGGSLGQRLAMCVDQ 206

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +MH+ D +P+V     + +AIT L+    G VA++D G  L+G+ T+GD+ R    D   
Sbjct: 207 LMHTAD-LPVVTDTVTVREAITALNSGGLGLVAIIDAGTMLRGVFTDGDVRRLVCSDAMD 265

Query: 283 LS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   V  VM  +P+  +        + ++ Q+ I+VL VV +  +  G+VH  DLL  G 
Sbjct: 266 MDRPVAGVMTVSPRRAVVGESSAHVLDVMEQNEITVLPVVLEDGRLAGMVHLHDLLGKGA 325

Query: 341 I 341
           +
Sbjct: 326 L 326


>gi|86279119|gb|ABC88654.1| KpsF [Escherichia coli BL21(DE3)]
          Length = 327

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/313 (39%), Positives = 183/313 (58%), Gaps = 9/313 (2%)

Query: 26  CALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
            ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++
Sbjct: 20  TSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  EA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAI
Sbjct: 77  TLASTGTPSFFIHPTEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF
Sbjct: 137 TNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPNDF 196

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L    +DVM     +  V++       I  ++    G V V D    L
Sbjct: 197 ARYHPGGSLGRRLLTRVADVMQH--DVSAVQLDASFKTVIQRITSGCQGMVMVEDAEGGL 254

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V +
Sbjct: 255 AGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTVIIEAEEKMQKHRVSTLLVTN 314

Query: 322 DCQKAIGIVHFLD 334
              K  G+V   D
Sbjct: 315 KANKVTGLVRIFD 327


>gi|187251001|ref|YP_001875483.1| arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
 gi|186971161|gb|ACC98146.1| Arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
          Length = 329

 Score =  218 bits (554), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 125/326 (38%), Positives = 192/326 (58%), Gaps = 10/326 (3%)

Query: 19  MKNST---VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           MKN++    + A   +  E   L+    S+ G     F  +V  I +I GRVV+ GIGKS
Sbjct: 1   MKNNSDEIKKTAKEVLEVENNELAKSHKSIDG----NFIKSVNIINSISGRVVVLGIGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+A+TLASTGTP+ F+H  EA HGDLGMI   D I+ LS+SG+++E+  ++    
Sbjct: 57  GIIGRKIAATLASTGTPALFMHPVEALHGDLGMIQTSDAILALSFSGNTEEISKLIPLIS 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +  +P+I++T    S +A  +D+ + +    E+CP+ LAPT+S  + LA+GDALAI L+ 
Sbjct: 117 KRKLPVISMTGNENSKLAKLSDVHIKMHVSKEACPYNLAPTSSTTVMLALGDALAICLMR 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            ++F + DF V HPGG LG L     SD+M +G+  P+V     + DA+ ++++ + G  
Sbjct: 177 LKHFEKKDFAVFHPGGSLGKLLTNNVSDLMSTGNMNPVVTGDKLVKDALFVMTKTKAGAT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           +VVD+  KL G  T+GD+ R    D N L   V  +M K P  +L+DT    A +++ + 
Sbjct: 237 SVVDKNGKLLGFFTDGDLRRALQADHNILDKKVSAIMTKKPTAVLQDTPAVEAAKIISER 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  + V+D   K +GI+   DL+ F
Sbjct: 297 RIDNVPVIDKKGKVVGILDKSDLIDF 322


>gi|94986528|ref|YP_594461.1| CBS domain-containing protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94730777|emb|CAJ54139.1| FOG: CBS domain [Lawsonia intracellularis PHE/MN1-00]
          Length = 360

 Score =  218 bits (554), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 183/301 (60%), Gaps = 4/301 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +++  L   F  A+  + + KGRV++TG+GKSG +G K+A+T +STGTP+FF+H  E +H
Sbjct: 56  TIRERLGNTFVEALLLLSSCKGRVIVTGVGKSGLVGRKIAATFSSTGTPAFFMHPVEGAH 115

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+G +   DLI+ +S SG + EL AI+   + F  P+IA+TS   S +A  A++VL   
Sbjct: 116 GDIGSLKSSDLILSISNSGETPELNAIVPTIKSFGTPMIALTSVLNSTLAKAANVVLHTE 175

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
              E+CPHGLAPT S    LA+GDA+A+ L+  ++F+E DF   HPGG LG  L +  ++
Sbjct: 176 VPKEACPHGLAPTASTTAVLALGDAIAVCLMSLKSFTEKDFLRYHPGGMLGQRLTLSVTE 235

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDL 280
           VM + D +P V +G    +A+  L +   G V ++D+   + GIIT+GD+ R+  +++  
Sbjct: 236 VMRT-DGLPTVHLGTSQCNALKTLDKGGLGVVLIIDKKNTVCGIITDGDVRRSICYNRLK 294

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               VE +M   PK       + + + ++ Q  I+VL +VDD  K +GIVH  DLL  G 
Sbjct: 295 QDAPVEQIMTPRPKCGKPQDTIAILLDIMEQKAITVLPIVDDNYKLLGIVHIHDLLGKGT 354

Query: 341 I 341
           I
Sbjct: 355 I 355


>gi|312144456|ref|YP_003995902.1| KpsF/GutQ family protein [Halanaerobium sp. 'sapolanicus']
 gi|311905107|gb|ADQ15548.1| KpsF/GutQ family protein [Halanaerobium sp. 'sapolanicus']
          Length = 330

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/317 (40%), Positives = 185/317 (58%), Gaps = 8/317 (2%)

Query: 28  LRSIIAEKRGLSSLESS----LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           L S + E + +  +E+     ++  L   F  A++ I    GRVV TG+GK+G +  K+A
Sbjct: 11  LSSAMDEAKNVLEIEAEAVLKIRDNLDGSFKEAMKIIIDCPGRVVFTGVGKAGLVAKKMA 70

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T +STGT +FFVHA E  HGDLGMI   D++I +S SG SDE+ ++L   RR  + LIA
Sbjct: 71  ATFSSTGTSAFFVHAGEGLHGDLGMIKNGDVVIAVSNSGESDEVISLLPSLRRIGVKLIA 130

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T +N S +A +AD++L      E+CP  LAPT S    +A+GDALAIAL     F++ D
Sbjct: 131 LTGDNDSTLATYADLILETDVITEACPLNLAPTASTTAAIALGDALAIALSTYYGFTQED 190

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L     DV+      P+VK    +  A+  +++ R G  +VVD+   
Sbjct: 191 FALYHPGGSLGKKLLTKVKDVVEIRKQNPIVKTETSVRQALFKMTKTRMGSTSVVDQAGN 250

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKGIIT+GDI R   K  D     V+D M  +P  I +D L   A+Q++ +  I+ L VV
Sbjct: 251 LKGIITDGDIRRLLEKSADFIDRPVKDYMTVDPVTITKDKLAAEALQIMEEKEINDLPVV 310

Query: 321 DDCQKAIGIVHFLDLLR 337
            +  K + +++F DLLR
Sbjct: 311 -EAGKPVAMLNFQDLLR 326


>gi|149276387|ref|ZP_01882531.1| sugar phosphate isomerase, KpsF/GutQ family protein [Pedobacter sp.
           BAL39]
 gi|149232907|gb|EDM38282.1| sugar phosphate isomerase, KpsF/GutQ family protein [Pedobacter sp.
           BAL39]
          Length = 321

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 126/319 (39%), Positives = 188/319 (58%), Gaps = 8/319 (2%)

Query: 29  RSIIAEKRGLSSLESS----LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +SIIA       LE+     L   ++  F   VE I A  GR+++TGIGKS  I  K+ +
Sbjct: 5   KSIIAAAVNTLQLEAQSILGLIPNINDDFVKIVELILACNGRIIVTGIGKSAIIAQKIVA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T  STGTPS F+HAA+A HGDLGMI ++D++I +S SG++ E+K +    ++    ++ +
Sbjct: 65  TFNSTGTPSIFMHAADAVHGDLGMIQKNDIVICISKSGNTPEIKVLAPLLKQSGNVMVGM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
             +  S +A  +D +L    + E+CP+ LAPTTS   QLA+GDALA+ LL +R+F+E DF
Sbjct: 125 IGQVNSDLARLSDFLLNTTVDKEACPNNLAPTTSTTAQLAMGDALAVCLLHARDFNEKDF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG      +  +   ++ P +     + D I  +S+ R G V VV E   + 
Sbjct: 185 ARYHPGGSLGKRLYLKTGDLALKNAKPSIAPDAAVKDVIVEISQNRLGAVVVV-ESNAIL 243

Query: 265 GIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+IT+GDI R    H DL  +   D+M +NPK I +D L   A++L++++NI+ L+V  D
Sbjct: 244 GVITDGDIRRMLEKHTDLTNIKASDLMNRNPKKIEKDVLAVGALELIKENNITQLLVT-D 302

Query: 323 CQKAIGIVHFLDLLRFGII 341
                GI+H  DLL+ GII
Sbjct: 303 AGAYFGIIHLHDLLQEGII 321


>gi|325280333|ref|YP_004252875.1| KpsF/GutQ family protein [Odoribacter splanchnicus DSM 20712]
 gi|324312142|gb|ADY32695.1| KpsF/GutQ family protein [Odoribacter splanchnicus DSM 20712]
          Length = 321

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 178/293 (60%), Gaps = 5/293 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   V  I   KGRV++TGIGKS  I  K+ +TL STGTP+ F+HAA+A HGDLGMI  D
Sbjct: 30  FEKVVRLIYNTKGRVIVTGIGKSAIIAQKIVATLNSTGTPAVFMHAADAIHGDLGMICHD 89

Query: 113 DLIIVLSWSGSSDELKAILYYARRF-SIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           D++I +S SG++ E+K ++   R   +  ++A+ S   S +A +A  VL    + E+CP+
Sbjct: 90  DVVICISKSGNTPEIKVLVPLIRNVGNEQIVAMVSNTDSFLAKNAAYVLKAQVDREACPN 149

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAPT S   QL +GDALAI L++ R+FS  DF   HPGG LG  L+   SDV    D+ 
Sbjct: 150 NLAPTNSTTAQLVMGDALAICLIQCRSFSSRDFAKYHPGGSLGKRLYTRVSDVFDQ-DNR 208

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V +   +   I  +S  R G VAV D    L GIIT+GD+ R   K  D++ L   D+
Sbjct: 209 PYVSLEDGIRKVILEMSGGRLGAVAVTDAEGGLLGIITDGDLRRMLEKYEDVDGLKARDI 268

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  +PK I E+ L   A Q + Q++I+ L+VVD+ +K  G+VH  D+LR G++
Sbjct: 269 MSVSPKTIQEEELAYNAFQKMEQNSITQLVVVDEDKKYKGMVHIHDILREGVV 321


>gi|237752755|ref|ZP_04583235.1| KpsF/GutQ family protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229376244|gb|EEO26335.1| KpsF/GutQ family protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 313

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 184/296 (62%), Gaps = 8/296 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++   F+  +  I  IKGR++I+G+GKSGHIG+K+A+TLASTGTPSFF+H AEA HG
Sbjct: 22  LKTKMDSNFNAVIACILGIKGRLIISGMGKSGHIGAKIAATLASTGTPSFFMHPAEALHG 81

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+  +D ++ +S SG S+E+  ++   R   IPLIA++ ++ S +A  +D  L +  
Sbjct: 82  DLGMLREEDALLAISNSGESEEILRLIPSIRIRKIPLIALSGKSDSTLARESDYFLNVGV 141

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP  LAPT+S    LA+GDA+A+AL+ +RNF   DF + HPGG LG  L     D+
Sbjct: 142 KKEACPLQLAPTSSTTATLAMGDAIAVALMRARNFKPEDFALFHPGGSLGRKLLTRVKDI 201

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M S + +P+V         I  ++ K+ G V +V E  KL GIIT+GD+ R  + D    
Sbjct: 202 MVSKN-LPIVAPDSSFKTLIAEMTSKKLG-VCLVCEDTKLLGIITDGDLRRALNADKFNA 259

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLR 337
           +  ++M ++PK I  + + T A  L+ +H I  L+V+D  DC   +G+V    + R
Sbjct: 260 NAREIMTEHPKTINLNAMATEAESLMLEHKIKELVVMDHTDC---VGVVQLYTIAR 312


>gi|305664749|ref|YP_003861036.1| hypothetical protein FB2170_00550 [Maribacter sp. HTCC2170]
 gi|88707871|gb|EAR00110.1| hypothetical protein FB2170_00550 [Maribacter sp. HTCC2170]
          Length = 321

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 135/328 (41%), Positives = 192/328 (58%), Gaps = 12/328 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M NS   +  A ++I  E + + +L S L G     F   VE I   KGRVVITGIGKS 
Sbjct: 1   MNNSETILNLAKKTIETESQAIGNLASLLDG----NFSKTVESILNSKGRVVITGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I +K+ +TL STGTP+ F+HA +A HGDLG I  DD++I +S SG++ E+K ++   +R
Sbjct: 57  IIATKIVATLNSTGTPAIFMHAGDAIHGDLGTIQEDDVVICISKSGNTPEIKMLVPLIKR 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            S  LI +T    S +A  A   L    E E+CP+ LAPTTS   QL +GDALAI LLE 
Sbjct: 117 GSNILIGMTGNISSFLAQQAHFNLNTFVEKEACPNNLAPTTSTSAQLVMGDALAICLLEL 176

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           + FS  DF   HPGG LG  L++   D++   ++ P V +   +   I  +SEK  G  A
Sbjct: 177 KGFSSKDFAKYHPGGALGKRLYLTVDDIVQI-NAKPQVSLDTDVRKVIVEISEKMLGVSA 235

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+ E  K+ G++T+GDI R  N +  +N L+ +D+M  NPK +    L  VA++L++   
Sbjct: 236 VIHE-NKIVGVVTDGDIRRMLNKYDSINGLTAKDIMTSNPKTVDVSKLAVVALELMQDKG 294

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           IS L+ V D +   G+VH  +L+  GI+
Sbjct: 295 ISQLLAVKDDEYK-GVVHLHNLINEGIL 321


>gi|332701277|ref|ZP_08421365.1| KpsF/GutQ family protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332551426|gb|EGJ48470.1| KpsF/GutQ family protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 330

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/305 (40%), Positives = 181/305 (59%), Gaps = 14/305 (4%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S ++  L   F  AVE + A  GRV+++G+GKSG +G K+A+T++STGT + F+H  E +
Sbjct: 26  SQVRDGLDESFALAVEMLAACHGRVIVSGLGKSGLVGRKIAATMSSTGTAAAFLHPVEGA 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ LS SG +DEL AI+   +     ++AIT    S +   AD+V+  
Sbjct: 86  HGDLGMIRPGDVVLALSNSGETDELNAIVPSLKAMGAQVVAITGNRDSTLGRLADVVVQA 145

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
               E+CP  LAPT S    LA+GDALA+ LL+ + F+E DF + HPGG LG  L     
Sbjct: 146 KVAREACPLNLAPTASTTATLAVGDALAVCLLQCKPFTEADFRMCHPGGALGQRLSRKVG 205

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------- 274
           D+MH+  ++P+V  G  L  A+  L+  R G VAVVD   +L+GI  +GD+ R       
Sbjct: 206 DMMHT-RNLPVVGAGSDLGAAMAELNRGRLGMVAVVDRQGRLQGIFVDGDVRRLAMSNGL 264

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + H+     +V +VM+K+PK +  +     AM ++  H I+VL VVDD    +G++H  D
Sbjct: 265 DMHR-----AVAEVMVKSPKTLRPEGKAAEAMDIMEAHQITVLPVVDDTGVLLGMLHLHD 319

Query: 335 LLRFG 339
           LL  G
Sbjct: 320 LLGKG 324


>gi|114778210|ref|ZP_01453082.1| KpsF/GutQ family protein [Mariprofundus ferrooxydans PV-1]
 gi|114551457|gb|EAU54012.1| KpsF/GutQ family protein [Mariprofundus ferrooxydans PV-1]
          Length = 328

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 127/304 (41%), Positives = 180/304 (59%), Gaps = 8/304 (2%)

Query: 43  SSLQGE---LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++LQ +   L   F  AV  I  +KGR+V+ G+GKSG I  K+A+T ASTGTP+FFVHAA
Sbjct: 26  AALQAQRESLDDSFVQAVATILDLKGRLVVVGMGKSGIIAKKIAATFASTGTPAFFVHAA 85

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           EA HGDLGMIT  D ++ LS SG + E+  +L   RR    +IA+T +  S +A +AD V
Sbjct: 86  EAQHGDLGMITGQDAVLALSHSGETAEVCGLLPEIRRRGAHVIAMTGDRSSTLARYADTV 145

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L +  + E+CP  LAPT S    LA+GDALA+ +L+ R F E DF  +HP G LG   + 
Sbjct: 146 LHIDVQLEACPLNLAPTASTTATLALGDALAVVVLKERGFREEDFARVHPAGSLGRKLLR 205

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NF 276
             D+MH G  +P+V     L +AI  +S  R G   V D G  + G I++GD+ R   + 
Sbjct: 206 VQDIMHQGQELPMVARTASLREAIMEISAHRLGITGVTD-GGDIIGCISDGDLRRILESG 264

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           H DL+   V  +M  NP  I    L + A++L+ ++ + VL   D+  +  GI+H  D+L
Sbjct: 265 HMDLDA-PVYTLMHPNPMCIDAGRLASEALRLMEENKVLVLFARDEHGQVNGIIHMHDIL 323

Query: 337 RFGI 340
           + GI
Sbjct: 324 QGGI 327


>gi|291515864|emb|CBK65074.1| KpsF/GutQ family protein [Alistipes shahii WAL 8301]
          Length = 321

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/320 (36%), Positives = 194/320 (60%), Gaps = 10/320 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   ++ A ++I  E   L  +E +L  E    F  AVE I   +G+ ++TG+GKSG +G
Sbjct: 6   KAQILEVARKAIHTEMLSLKRMEDTLGDE----FATAVEMILGSRGKCIVTGMGKSGLVG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA HGDLGMI+++D+++ LS+SG +DE+  I+ +      
Sbjct: 62  RKIAATLASTGTPSFFLHPGEAFHGDLGMISKEDIVVALSYSGETDEILKIVPFIHSNGN 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+++T    S +A ++D+ L +  + E+C   LAPT+S   Q+A+GDALA++L++ R F
Sbjct: 122 KLVSMTGNPDSALAKNSDVHLDVGVKEEACILHLAPTSSTTAQIAMGDALAVSLMQMRGF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF  LHPGG LG  L +   +VM   D +P+V   CP  + I  +S+   G + V+ 
Sbjct: 182 TSVDFARLHPGGSLGRRLLMTVGNVMRDHD-LPVVAPDCPAAEMIHAISKGGLGLI-VIC 239

Query: 259 EGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           EG++++GI+T+GD+ R   +   +   +   D+  +NPK I  D  L  A +++ ++ ++
Sbjct: 240 EGERIEGIVTDGDVRRAMERLRGEFFNIRASDIATRNPKTISPDEKLIEAEKMMTRNKVT 299

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L+V D   K  G++   D+
Sbjct: 300 SLLVTDAAGKLTGVIQIYDI 319


>gi|254455498|ref|ZP_05068927.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082500|gb|EDZ59926.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 322

 Score =  216 bits (551), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 190/301 (63%), Gaps = 6/301 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ ++   F+ AV +I   + +V++ G+GKSG I SK+A+TL+S GTP+F + A+++SHG
Sbjct: 24  LKKKIDNSFNKAVVEIAKCQSKVIVCGVGKSGLIASKIAATLSSVGTPAFKLSASDSSHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG I + D++I+LS+SG ++ELK I+ YA R  + LI I S+  S++   ADI L +P+
Sbjct: 84  DLGSIQKKDVLILLSYSGQTNELKNIIQYANRNKVLLIGIMSKKDSILYKAADIKLLIPQ 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             ES   G+ PT+S  +QLA+GDALAIA ++ +NF + DF  +HP G LG       D+M
Sbjct: 144 VIESG--GIVPTSSTTVQLALGDALAIAAMQYKNFGKLDFKKIHPAGNLGLKLKTVEDLM 201

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT 282
            +G  IP V+    +  A+ IL++K+ G + + D+ +K  GIIT+G I  F++   + ++
Sbjct: 202 VTGPQIPFVQDNINMKKALEILTKKKLGFLIIQDKNKKTIGIITDGQIRRFKSKKNNFHS 261

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRFGI 340
           L V++VM KNP  + +D L   A+ L+    I+ L V    +  K IG++H  ++L   I
Sbjct: 262 LKVKNVMTKNPIGVDKDMLAAKALALMNHKKITSLSVFSKKNKSKTIGVIHIHNILASNI 321

Query: 341 I 341
           +
Sbjct: 322 V 322


>gi|283788164|ref|YP_003368029.1| arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
 gi|282951618|emb|CBG91318.1| arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
          Length = 293

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 118/269 (43%), Positives = 169/269 (62%), Gaps = 8/269 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIEREGLAELDQYINQD----FTLACEKMFNCTGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  + LI 
Sbjct: 69  ATFASTGTSSFFVHPGEAAHGDLGMVTAQDVVIAISNSGESSEIAALIPVLKRLQVQLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESTMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+G+ IP V+    L DA+  ++ K  G   + DE  K
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGEEIPHVRKEASLRDALLEITRKNLGMTVICDETMK 248

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           + GI T+GD+ R F    D+  L + DVM
Sbjct: 249 IDGIFTDGDLRRVFDMGVDVRQLGIADVM 277


>gi|57241893|ref|ZP_00369833.1| KpsF/GutQ family protein [Campylobacter upsaliensis RM3195]
 gi|57017085|gb|EAL53866.1| KpsF/GutQ family protein [Campylobacter upsaliensis RM3195]
          Length = 316

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 120/293 (40%), Positives = 179/293 (61%), Gaps = 7/293 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  A+E I  IKGR +I+G+GKSGHIG+K+A+TLASTGTPSFF+H  EA H
Sbjct: 21  NLSENLDHNFSKAIELILDIKGRCIISGMGKSGHIGAKIAATLASTGTPSFFIHPGEALH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT +D++I +S SG ++EL  I+   +R  IPLIA++   KS +A  A+I L + 
Sbjct: 81  GDLGMITSEDVLIAISNSGETEELLKIIPAVKRRQIPLIAMSGNIKSTLAKQAEIFLNIA 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            + E+CP  LAP +S    L +GDA+A AL+++R F  +DF + HPGG LG  L     D
Sbjct: 141 IKKEACPLQLAPMSSTTATLVMGDAIAAALMKARKFQPDDFALFHPGGSLGRKLLTKVKD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M S   +P+V       + + +++  + G + +V E  KL GIIT+GD+ R    +   
Sbjct: 201 LMVS-KKLPIVNPQTEFNELVNVMTSGKLG-LCIVLENDKLVGIITDGDLRRALKANAKP 258

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +++M  NPK+I ++ + T A QL+ +H I  + VV    + +GI+  
Sbjct: 259 RFDFKAKEIMSHNPKIIDQEAMATEAEQLMLKHKIKEI-VVGKNGRVVGIIQL 310


>gi|149925780|ref|ZP_01914044.1| carbohydrate isomerase, KpsF/GutQ family protein [Limnobacter sp.
           MED105]
 gi|149825897|gb|EDM85105.1| carbohydrate isomerase, KpsF/GutQ family protein [Limnobacter sp.
           MED105]
          Length = 330

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 136/302 (45%), Positives = 185/302 (61%), Gaps = 3/302 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L   L+ QF  A   I   KGRV++ G+GKSG I  K+A+T ASTGTPSFFVHA EAS
Sbjct: 29  SALAERLNDQFSQATTAILNCKGRVILVGVGKSGLIAKKIAATFASTGTPSFFVHATEAS 88

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMIT+DD++I LS SG+++EL A+L    R    ++A+T +  S +A  AD+VL  
Sbjct: 89  HGDLGMITQDDVVIALSNSGNTEELVAVLPAIARRGAKIVAMTGKLDSALARQADLVLDC 148

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             E E+CP  LAPT S    LA+GDALA+ +L++R FSE DF + HPGG LG  L    S
Sbjct: 149 GVEKEACPLNLAPTASTTAALALGDALAVVVLKARGFSEEDFALSHPGGSLGRKLLTHVS 208

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           DVM  GD IP V     +  AI  +++K  G  AVV    KL G+ T+GD+ R   +  D
Sbjct: 209 DVMRKGDRIPTVSPSASISSAILEITKKGLGMTAVVGANNKLLGVFTDGDLRRLIEQGLD 268

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L  L V +VM   PK I  D L   A++++   +IS ++V D+    +G ++F DL    
Sbjct: 269 LRGLLVSEVMNTLPKCISPDKLAVEAVRMMEVSHISQVVVTDEQGHIVGALNFHDLFEAK 328

Query: 340 II 341
           ++
Sbjct: 329 VV 330


>gi|116621618|ref|YP_823774.1| KpsF/GutQ family protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116224780|gb|ABJ83489.1| KpsF/GutQ family protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 339

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 182/321 (56%), Gaps = 9/321 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N  +  A  ++  E   ++     L GEL      AVE I A  G+VV+TGIGKSGHI 
Sbjct: 18  ENEWLAAARAAMRIEAESIARAAERLDGELVR----AVELILAHPGKVVVTGIGKSGHIA 73

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGT + F+H AEA+HGDLG+ T  D  IV+S +G+S EL++++   R+F  
Sbjct: 74  RKIVATLCSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRS 133

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PL+ I     S +    D++L    E E+ PH LAPT SA+  LA+G ALAIAL+ +RNF
Sbjct: 134 PLVGILGNAHSPLGAEVDVLLDASVEREADPHNLAPTASAVTALALGHALAIALMCARNF 193

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  +F   HPGG+LG  L +   + MH  D +  V  G  L D I  ++ K  G   VV 
Sbjct: 194 TPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIAMTRKPMGGACVVA 253

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNI 314
           E   L G IT+GD+ R    H D+  L+  + M   P  I  +  L  A++L+  R+  I
Sbjct: 254 EAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLGQALELMERRRSQI 313

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           SVL VVD   +A+G+V   D+
Sbjct: 314 SVLPVVDGDGRALGVVRIHDI 334


>gi|315022664|gb|EFT35689.1| Arabinose 5-phosphate isomerase [Riemerella anatipestifer RA-YM]
 gi|325334966|gb|ADZ11240.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Riemerella anatipestifer RA-GD]
          Length = 319

 Score =  216 bits (550), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/326 (40%), Positives = 193/326 (59%), Gaps = 10/326 (3%)

Query: 19  MKNST-VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK+ST +  A ++I  E   L  L  SL       F  AVE I    G++++ GIGKS H
Sbjct: 1   MKSSTLIDIAKKAIDTEIAELERLRDSLDN----SFLDAVELINKSSGKLIVVGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+ +TL STGTP+ F+HAAEA HGDLG++ ++D+++ +S SG+S E+  +  Y +++
Sbjct: 57  VGNKIVATLNSTGTPAQFLHAAEAIHGDLGVVQKNDVVLCISNSGNSPEIVNLAPYLKQY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  LI +T   KS +A H+DIVL    E E+CP+ LAPT+S  +Q+A+GDALA+ L+E  
Sbjct: 117 SAGLIGMTGNLKSKLAEHSDIVLNTFVEKEACPNKLAPTSSTTVQMALGDALAVCLMEIN 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F + DF   HPGG LG           S    P V  G  + + I  +S    G V VV
Sbjct: 177 HFKDTDFAKFHPGGSLGKNLTAKVGQFLSSQK-PQVSEGSSIKEVIISISASTHG-VTVV 234

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            EG+ +KGIIT+GD+ R    + D+  +  +D+M   PK I ++ L   AM++L+Q+NI 
Sbjct: 235 TEGETIKGIITDGDLRRMLMGNDDIKGIKAKDIMSLTPKTIDKEALAKEAMKILKQYNIG 294

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V D      GI+    LL  GI+
Sbjct: 295 QLIVTDKGN-YFGIIDLHTLLDEGIL 319


>gi|332291026|ref|YP_004429635.1| KpsF/GutQ family protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169112|gb|AEE18367.1| KpsF/GutQ family protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 321

 Score =  216 bits (549), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 10/320 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E+  +++L S +  E    F  AV+ I   KGRVVITGIGKS  I  K+ 
Sbjct: 8   IASAQKTIHIEQTAIANLSSLIDEE----FAQAVQAIYKSKGRVVITGIGKSAIIAQKIV 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+K ++   ++    LIA
Sbjct: 64  ATLNSTGTPALFMHAADAIHGDLGSILIDDIVICISKSGNTPEIKVLVPLIKKTENTLIA 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +   AD +L    E E+CP+ LAPTTS  +QL +GDA+A+ALL+ R F+E+D
Sbjct: 124 ITANRDSFLGKEADYILHANTEEEACPNNLAPTTSTTVQLVLGDAVAVALLDLRGFTESD 183

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L++   D+  + ++ P V     + + I  ++ K  G  AVV  G  
Sbjct: 184 FARYHPGGSLGKRLYLTVHDICATHEN-PQVTPDASIKEVIIEITNKMLGVTAVVLNG-V 241

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++GIIT+GD+ R   K+  L+ L+   +M   PK +  D +   A ++L  HNI+ L+V 
Sbjct: 242 IQGIITDGDLRRMLSKNDSLDGLTAAAIMSATPKTVRHDAMAIDAKEILEAHNITQLLVE 301

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            D   A G+VH  DL++ GI
Sbjct: 302 KDGNYA-GVVHIHDLIKEGI 320


>gi|109692189|gb|ABG37981.1| GutQ [Alkalimonas amylolytica]
          Length = 322

 Score =  216 bits (549), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q AL+ +  E   +S L   +  +    F+ A + I    GRV+++G+GKSGHI +K+A+
Sbjct: 7   QQALQVLQIEATAISQLARFVNDD----FNKACQLIMDSPGRVIVSGMGKSGHIANKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGMIT+DD++I +S SG + E+  I+   +R    LI +
Sbjct: 63  TFASTGTPAFFVHPGEASHGDLGMITKDDVVIAISNSGETGEVLTIIPVLKRIGAHLIGM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +    S +A  +D+ + +  E E+CP GLAPT S    LA+GDA+A+ALL +R FS +DF
Sbjct: 123 SGNPASTLARLSDVHVCVQVEQEACPLGLAPTASTTATLAMGDAMAVALLNARGFSADDF 182

Query: 205 YVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HP G     L +   DVMH+G++IP+V     +  A+  +S K  G   VVD+   L
Sbjct: 183 ALSHPGGSLGRRLLLRLEDVMHTGNTIPMVPTTATIKTALLEMSAKGLGMTTVVDKHGVL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R   +  D++   +  VM++N        L   A++L+ Q  I+ L++VD
Sbjct: 243 QGIFTDGDLRRILDQRYDIHDTLITAVMVRNCITAQPQMLAAEALKLMEQRKINGLVIVD 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G ++  DLL+ G++
Sbjct: 303 QHQHPVGAMNMHDLLKAGVL 322


>gi|254283770|ref|ZP_04958738.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR51-B]
 gi|219679973|gb|EED36322.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR51-B]
          Length = 324

 Score =  215 bits (548), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/311 (41%), Positives = 181/311 (58%), Gaps = 7/311 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  A R+I  E+  + +L       +   F  A   +   +GRVV+TG+GKSGHI +K+A
Sbjct: 8   VASAKRTITMEQSAVGALVE----HVGDTFAHACRALLRTEGRVVVTGMGKSGHIANKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+F+VH AEASHGD+GMIT  D +I LS SG++ E+  +L   +R ++ L+A
Sbjct: 64  ATLASTGTPAFYVHPAEASHGDMGMITARDAVIALSNSGTTPEVLTLLPLLKRLNVTLVA 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  AD  L    E E+CP  LAPT+S    L +GDALAIALLE+R F+ +D
Sbjct: 124 MTGAAGSALAEAADFHLYAGAETEACPLDLAPTSSTTAALVLGDALAIALLEARGFTADD 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L +   DVM +   +P V  G  L +A+  ++ K  G   V D   +
Sbjct: 184 FAFSHPGGALGRKLLLKVEDVMSAAGDVPRVAPGATLAEALMEITAKGLGMTTVTDSTGR 243

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R      D+N   ++ +M      + E TL   A+ ++ +H IS L+V 
Sbjct: 244 LLGIFTDGDLRRALEARPDINQTPIDSLMSTGGITVTEGTLAAEALGMMEEHRISALVVT 303

Query: 321 DDCQKAIGIVH 331
           D     IG+VH
Sbjct: 304 DRNGAVIGVVH 314


>gi|308189284|ref|YP_003933414.1| sugar phosphate isomerase [Pantoea vagans C9-1]
 gi|308055899|gb|ADO08068.1| Predicted sugar phosphate isomerase [Pantoea vagans C9-1]
          Length = 320

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 125/324 (38%), Positives = 186/324 (57%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +  A  +I  E R  S L   L  +    F  A E+I A  G+V+++GIGKSGHI
Sbjct: 1   MKHVILDAARETIETELREASRLTERLDED----FRQACERILACSGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMIT  D +I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMITAGDTVILISYSGYAAEFRRMVPLLKALP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++A T    S +   AD  + +    E+CP GLAPT+SA+  L +GDA+AIAL+++ N
Sbjct: 117 VGIVAFTGNPASPLGEAADHCINIHVNKEACPLGLAPTSSAVNTLIMGDAMAIALMQACN 176

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE D+   HP G LGT  +C   D+M + + IPLV     + DA+  L+    G VA++
Sbjct: 177 FSEQDYARTHPAGNLGTRLLCRVGDIMRTDEKIPLVSTSATIHDALFELTRTGLGLVAII 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +E ++L GI T+GD+ R   K    ++ V D M      +        A+ L ++  IS 
Sbjct: 237 NEDRRLSGIFTDGDLRRWLLKGGTLIAPVHDAMTSPGFTLSAGQYAAEALALFQKRKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VV D  +  G ++  D+   GI
Sbjct: 297 APVVSDTGEVKGAINAHDIRDAGI 320


>gi|320355030|ref|YP_004196369.1| KpsF/GutQ family protein [Desulfobulbus propionicus DSM 2032]
 gi|320123532|gb|ADW19078.1| KpsF/GutQ family protein [Desulfobulbus propionicus DSM 2032]
          Length = 323

 Score =  215 bits (548), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/320 (41%), Positives = 185/320 (57%), Gaps = 7/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +V  A   +  E  GL ++  +L GE   +F  AV+ I A   R+V+TGIGKSG IG K+
Sbjct: 2   SVALAKEVLTIESEGLLAVRDNL-GE---EFERAVDIIMACPSRLVVTGIGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TL STGT SFF+H  EA HGDLGM+   D+++ +S+SG + EL  +L   +     +I
Sbjct: 58  AATLNSTGTRSFFLHPVEAMHGDLGMVAATDVVLAISYSGETSELNRLLSSLKERQTQII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AI  +  S +A HA + L +    E+C  GLAPTTS    LA+GDALA+ALL  + F   
Sbjct: 118 AICGKLDSNLARHALVTLNVSIPREACSLGLAPTTSTTATLAMGDALAVALLNRKQFGAE 177

Query: 203 DFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L V   +VM +G+ +P V     L  A+  L+EK  G V V D+  
Sbjct: 178 DFRRNHPGGSLGARLKVAIREVMLTGERVPSVTTEASLAMAVAELNEKNLGAVFVTDDQG 237

Query: 262 KLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L+GI+T+GDI R  +  K L   S+   M  +P  I  D +   A+ +++QH I+VL V
Sbjct: 238 VLRGIVTDGDIRRLLSAGKSLENTSLAAGMTHDPVAIASDLMAADALSIMQQHEITVLAV 297

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           V   ++  GI+H  +LL  G
Sbjct: 298 VTQERRLAGILHLHNLLGKG 317


>gi|296104382|ref|YP_003614528.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058841|gb|ADF63579.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 321

 Score =  215 bits (548), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 181/301 (60%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTIIQCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SGS+ EL  I+   +  SI L+A+T +++S +A  A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKSIALLAMTGKSRSPLALAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 AVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            +M SGD+IP VK+   ++DA+  LS    G VAV D+ +++KG+ T+GD+ R       
Sbjct: 201 HLMRSGDAIPQVKLDTSVMDAMLELSRTGLGLVAVCDDTRQVKGVFTDGDLRRWLVGGGK 260

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               V + M      +  ++    A ++L +  I+   VVDD  +  G ++  D  + GI
Sbjct: 261 LEARVSEAMTSGGLTLNANSRAIEAKEVLMKRKITAAPVVDDAGRLCGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|315638353|ref|ZP_07893532.1| arabinose 5-phosphate isomerase [Campylobacter upsaliensis JV21]
 gi|315481564|gb|EFU72189.1| arabinose 5-phosphate isomerase [Campylobacter upsaliensis JV21]
          Length = 316

 Score =  215 bits (547), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 120/293 (40%), Positives = 179/293 (61%), Gaps = 7/293 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   L   F  A+E I  IKGR +I+G+GKSGHIG+K+A+TLASTGTPSFF+H  EA H
Sbjct: 21  NLSENLDHNFSKAIELILNIKGRCIISGMGKSGHIGAKIAATLASTGTPSFFMHPGEALH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMIT +D++I +S SG ++EL  I+   +R  IPLIA++   KS +A  A+I L + 
Sbjct: 81  GDLGMITSEDVLIAISNSGETEELLKIIPAVKRRQIPLIAMSGNVKSTLAKQAEIFLNIA 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            + E+CP  LAP +S    L +GDA+A AL+++R F  +DF + HPGG LG  L     D
Sbjct: 141 IKKEACPLQLAPMSSTTATLVMGDAIAAALMKARKFQPDDFALFHPGGSLGRKLLTKVKD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M S   +P+V       + + +++  + G + +V E  KL GIIT+GD+ R    +   
Sbjct: 201 LMVS-KKLPIVNPETEFNELVDVMTSGKLG-LCIVLENDKLVGIITDGDLRRALKANAKP 258

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +++M  NPK+I ++ + T A QL+ +H I  + VV    + +GI+  
Sbjct: 259 RFDFKAKEIMSHNPKIIDQEAMATEAEQLMLKHKIKEI-VVGKNGRVVGIIQL 310


>gi|256820492|ref|YP_003141771.1| KpsF/GutQ family protein [Capnocytophaga ochracea DSM 7271]
 gi|256582075|gb|ACU93210.1| KpsF/GutQ family protein [Capnocytophaga ochracea DSM 7271]
          Length = 320

 Score =  215 bits (547), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 186/293 (63%), Gaps = 8/293 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  ++E I   KGRVVITGIGKS  I +K+ +T+ STGTP+ F+HAA+A HGDLG+I +D
Sbjct: 32  FTKSMEYILQSKGRVVITGIGKSAIIANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQD 91

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG++ E+K ++   +R +  LIAITS   SV+A  AD VL    E E+CP+ 
Sbjct: 92  DVVICISKSGNTPEIKVLVPLLKRGNNKLIAITSNRNSVLAQQADSVLYAHVEKEACPNN 151

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD-VMHSGDSI 230
           LAPTTS   QL +GDALA+ LLE ++F  +DF   HPGG LG  L++  +D V+H  +  
Sbjct: 152 LAPTTSTTAQLVLGDALAVCLLEMKHFGSSDFAKYHPGGALGKRLYLKVADIVVH--NQK 209

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     +   I  +SEK  G  AV+D G ++ G++T+GDI R   K   +  L  +D+
Sbjct: 210 PEVAPDTDIKKVIVEISEKMLGVAAVIDNG-RIVGVVTDGDIRRMLSKTDSIKGLVAKDI 268

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  NPK I  ++L   A+ L+ ++ I+ L+V  + Q   GI+H  +L++ G+I
Sbjct: 269 MSANPKTIDLESLAIDALHLMEKNKITQLLVTREGQYE-GIIHLHNLIQEGLI 320


>gi|260779437|ref|ZP_05888328.1| arabinose 5-phosphate isomerase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604527|gb|EEX30827.1| arabinose 5-phosphate isomerase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 321

 Score =  215 bits (547), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 125/295 (42%), Positives = 190/295 (64%), Gaps = 9/295 (3%)

Query: 53  FHCAVEKIKAIK-GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           F  A E I A K G+V + G+GKSGHIG+K+A++LASTGT +FFVH  EA+HGDLGMI  
Sbjct: 30  FVQACELILANKEGKVAVMGMGKSGHIGNKIAASLASTGTSAFFVHPGEAAHGDLGMIEP 89

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD--IVLTLPKEPESC 169
            D+++ +S SG S E+  +    +R +I +I++T + +S +A  +D  + +T+PK  E+C
Sbjct: 90  GDIVLAISNSGESSEILGLFPVLKRLNIKIISMTGKPESNMAKLSDYHLQITVPK--EAC 147

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGD 228
           P GLAPT S    LA+GDALA+ALL++R F+  DF + HPGG LG  L +  SD+MH+G+
Sbjct: 148 PLGLAPTASTTATLAMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLKLSDIMHTGE 207

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVE 286
            +PLV     + +A+  +S+K  G  AVVD  Q L GI T+GD+ R   K  D+++  + 
Sbjct: 208 QLPLVTPDTVVREALLEISQKGLGMTAVVDGHQHLVGIFTDGDLRRILDKRIDIHSALIG 267

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +VM  NP     + L    + L++Q +I+ L++  D  K +G ++  DLL+ G++
Sbjct: 268 EVMTTNPTTASPNILAAEGLNLMQQKSINGLILCLDG-KVVGALNMHDLLKAGVM 321


>gi|293394923|ref|ZP_06639213.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291422674|gb|EFE95913.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 323

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/288 (44%), Positives = 172/288 (59%), Gaps = 2/288 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           CA E +   +G+ V++GIGKSGHIG K+A+TLASTGTP+FFVH AEA HGDLGMI +DD+
Sbjct: 35  CACELLLNCRGKAVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIGKDDV 94

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S+SG + EL  IL       IPLIAI+   +S +A  A  +L +  E E+CP GLA
Sbjct: 95  VIFISYSGRAKELDLILPLLAENHIPLIAISGGKESPLATAAACLLDISVEREACPMGLA 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLV 233
           PT+SA+  L IGDALA+AL+  R F+  DF   HPGG LG  L      +M +GD +P V
Sbjct: 155 PTSSAVNTLMIGDALAMALMRQRGFNAEDFARSHPGGSLGARLLNRVHHLMRTGDRLPRV 214

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    +++A+  LS    G VAV D  QK+ G+ T+GD+ R   K  +        I  P
Sbjct: 215 KESANVMEAMLELSRTGLGLVAVCDTQQKVVGVFTDGDLRRWLVKGNSLNDALSPAITRP 274

Query: 294 KVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              L E      A++ L + +IS   VVD     +G ++  DL + GI
Sbjct: 275 GYRLPEQWRAGEALEALHEQHISAAPVVDINGILVGAINLHDLHQAGI 322


>gi|226329332|ref|ZP_03804850.1| hypothetical protein PROPEN_03237 [Proteus penneri ATCC 35198]
 gi|225202518|gb|EEG84872.1| hypothetical protein PROPEN_03237 [Proteus penneri ATCC 35198]
          Length = 276

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 118/275 (42%), Positives = 170/275 (61%), Gaps = 4/275 (1%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A+
Sbjct: 2   GMGKSGHIGHKIAATFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILAL 61

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +   +R  I LI +T   +S +   +DI L +    E+CP GLAPTTS    L +GDALA
Sbjct: 62  IPVLKRKQITLICMTRTPQSTMGKASDIHLCIKVPKEACPLGLAPTTSTTATLVMGDALA 121

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           IALL +R F+  DF + HPGG LG  L +  SD+M+  + IP V     L +A+  ++ K
Sbjct: 122 IALLRARGFTAEDFALSHPGGALGRKLLLHVSDLMNKEEDIPRVTKDATLREALVEITRK 181

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           + G   + D+  ++ GI T+GD+ R F    DLN   + DVM K    I  D L   A+ 
Sbjct: 182 KLGMTVICDDSMQINGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRIRPDCLAVEALN 241

Query: 308 LLRQHNISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
           L++  +I+ L+V + D    +G++H  DLL+ G++
Sbjct: 242 LMQAKHITSLLVTEQDSDILLGVLHMHDLLQAGVV 276


>gi|88803235|ref|ZP_01118761.1| KpsF/GutQ [Polaribacter irgensii 23-P]
 gi|88780801|gb|EAR11980.1| KpsF/GutQ [Polaribacter irgensii 23-P]
          Length = 322

 Score =  215 bits (547), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/322 (38%), Positives = 192/322 (59%), Gaps = 9/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +Q A  +I+ E   ++ L S L       F  AV  I    GRV++TGIGKS +I +K
Sbjct: 6   SILQTAKETILLESVAIAHLASLLDE----NFENAVNFILNSNGRVIVTGIGKSANIATK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T  STGTP+ F+HAA+A HGDLG +  +D++I LS SG++ E+K ++   + +   +
Sbjct: 62  IVATFNSTGTPAIFMHAADAIHGDLGNVQENDVVICLSKSGNTPEIKVLVPLIKNYGNKI 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT    S +  +AD  L    E E+C + LAPT+S   QL +GDALA+ L + R FS 
Sbjct: 122 IAITGNIHSFLGKNADFPLNTFVEKEACSNNLAPTSSTTAQLVMGDALAVCLQDLRGFSS 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG  L++  SD+  + + +P V++   + + I  +SEKR G  AV+ + 
Sbjct: 182 KDFAKYHPGGALGKKLYLRVSDLTKN-NQVPQVQLESSIAEVIVEISEKRLGVTAVL-KN 239

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GIIT+GDI R   K  ++  ++ +D+M  NPK I ++ +   A++ L   +I+ ++
Sbjct: 240 TELVGIITDGDIRRMLSKTSEIKNITAQDIMGTNPKTISQNAMAIEALEKLESDSITQIL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD     IG+VH  DL++ GI
Sbjct: 300 VVDANHTYIGVVHLHDLIKEGI 321


>gi|221090719|ref|XP_002170017.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 314

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/320 (39%), Positives = 185/320 (57%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A +SI+++   +  L + L  +    F   V+ I   KGR+V+TGIGKS  I  K+ 
Sbjct: 1   MENAKQSILSQSESIQKLTNYLTDD----FAKTVQLIFESKGRLVVTGIGKSAIIAQKIV 56

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTPS F+HAAEA HGDLGMI   DL++ +S SG+S E+K +    + F   LI 
Sbjct: 57  ATLNSTGTPSIFLHAAEAIHGDLGMIQTGDLVLCISKSGNSPEIKVLAPIIKSFGTTLIG 116

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S +A  +D+VL    + E CP GLAPT S   QL +GDA+A+ L++ RNF   D
Sbjct: 117 MTANPTSFLATSSDLVLHAHVDAECCPIGLAPTNSTTAQLVLGDAIAVCLMKLRNFQAED 176

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGG LG   +     M      P V     +   I  +SEKR G  AV+ E + +
Sbjct: 177 FAKYHPGGALGKKLLLRVKDMLDNTHAPQVAPNASIKKVIMEISEKRLGVTAVI-ENEVV 235

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GDI R     +  + L+ +D+M KNPK I    L++ A+ +L  + I+ LMV+D
Sbjct: 236 IGIITDGDIRRMLTDRETFSDLTAQDIMTKNPKSIASTVLVSEALDVLEDYKITQLMVID 295

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +     G++H  D+L+ GI+
Sbjct: 296 NGIYK-GVLHLHDILKEGIV 314


>gi|315223593|ref|ZP_07865448.1| arabinose 5-phosphate isomerase [Capnocytophaga ochracea F0287]
 gi|314946509|gb|EFS98503.1| arabinose 5-phosphate isomerase [Capnocytophaga ochracea F0287]
          Length = 320

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/293 (43%), Positives = 185/293 (63%), Gaps = 8/293 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  ++E I   KGRVVITGIGKS  I +K+ +T+ STGTP+ F+HAA+A HGDLG+I +D
Sbjct: 32  FTKSMEYILQSKGRVVITGIGKSAIIANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQD 91

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I +S SG++ E+K ++   +R +  LIAITS   SV+A  AD VL    E E+CP+ 
Sbjct: 92  DVVICISKSGNTPEIKVLVPLLKRGNNKLIAITSNRNSVLAQQADSVLYAHVEKEACPNN 151

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD-VMHSGDSI 230
           LAPTTS   QL +GDALA+ LLE ++F  +DF   HPGG LG  L++  +D V+H+    
Sbjct: 152 LAPTTSTTAQLVLGDALAVCLLEMKHFGSSDFAKYHPGGALGKRLYLKVADIVVHNQK-- 209

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P V     +   I  +SEK  G  AV+D G ++ G++T+GDI R   K   +  L  +D+
Sbjct: 210 PEVAPDTDIKKVIVEISEKMLGVAAVIDNG-RIVGVVTDGDIRRMLSKTDSIKGLVAKDI 268

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  NPK I  + L   A+ L+ ++ I+ L+V  + Q   GI+H  +L++ G+I
Sbjct: 269 MSANPKTIDLENLAIDALHLMEKNKITQLLVTREGQYE-GIIHLHNLIQEGLI 320


>gi|86160480|ref|YP_467265.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776991|gb|ABC83828.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 348

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 122/318 (38%), Positives = 185/318 (58%), Gaps = 11/318 (3%)

Query: 29  RSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R+++ AE R + ++       L   F  AV  I   KGRVV+TG+GK G +  K+++TLA
Sbjct: 37  RTVVEAEARAIGAVP------LDDAFATAVRWILGCKGRVVVTGMGKPGFVAQKISATLA 90

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++    ++AIT++
Sbjct: 91  STGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITAD 150

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             + +A  AD+V+ +    E+CP GLAPT S  + LA+GDAL++ +L +R F   ++ + 
Sbjct: 151 RSNRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDALSMTVLANRPFDREEYALF 210

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKG 265
           HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV     L G
Sbjct: 211 HPGGKLGRGLMKVHELMRGETSNPVVREDAPLAAAVAVMTETPGRPGATSVVAADGTLVG 270

Query: 266 IITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +     S  V   M K PK +  D L+  A ++LRQ  I  + VVD  
Sbjct: 271 IFTDGDLRRLVERGDTDFSRPVSSAMCKGPKTVRPDALVVDAARVLRQARIDQVPVVDAD 330

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G++   DLL   I+
Sbjct: 331 GRPVGLLDVQDLLAAKIL 348


>gi|294674307|ref|YP_003574923.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
 gi|294473755|gb|ADE83144.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
          Length = 316

 Score =  214 bits (546), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 120/295 (40%), Positives = 185/295 (62%), Gaps = 9/295 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL  +L   F  AVE I   KG+V++TG+GKSGHIG+K+A+TL+STGTPSFF +  +  H
Sbjct: 21  SLIPQLDENFDKAVELILNCKGKVIVTGVGKSGHIGAKIAATLSSTGTPSFFTNPLDVFH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++T+DD+++ +S SG +DEL   +       IP+I ++   KS++A ++   L + 
Sbjct: 81  GDLGVMTQDDVVLAISNSGQTDELLRFIPMVLHMQIPIIGMSGNPKSLLAKYSTYHLNVQ 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP  LAPT+S   QL +GDALAIAL+E RNF   DF   HPGG+LG  L   A D
Sbjct: 141 VEKEACPLNLAPTSSTTAQLTMGDALAIALMEKRNFQPRDFAQFHPGGELGKRLLTTAQD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGC-VAVVDEGQKLKGIITEGDIFRNFHK--- 278
           VM + D +P++     L +AI ++S+ + G  +A+V+   ++ G+IT+GDI R   K   
Sbjct: 201 VMRTED-MPVLPPEMHLGEAIILVSKAKLGLGIAMVN--NEIVGLITDGDIRRAMEKWQA 257

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
                +V D+M + PK++  DT +T   +++ Q+ +  ++V D     +G+V H+
Sbjct: 258 QFFDRTVSDIMTRTPKMVKPDTKITEIQRIMNQYKVHSVLVTDGENHLLGVVDHY 312


>gi|149372420|ref|ZP_01891608.1| sugar phosphate isomerase, KpsF/GutQ family protein [unidentified
           eubacterium SCB49]
 gi|149354810|gb|EDM43373.1| sugar phosphate isomerase, KpsF/GutQ family protein [unidentified
           eubacterium SCB49]
          Length = 321

 Score =  214 bits (545), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/324 (39%), Positives = 193/324 (59%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           NS ++ A ++I+AE + + +L S +       F  AV  I    GRV++TGIGKS +I +
Sbjct: 5   NSIIKNAKQTILAEAKAIENLASLVDD----SFAQAVTAILQSSGRVIVTGIGKSANIAT 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGTP+ F+HAA+A HGDLG I  DD +I +S SG++ E+K ++   +     
Sbjct: 61  KIVATLNSTGTPAIFMHAADAIHGDLGTIQEDDTVICISKSGNTPEIKVLVPLIKARKNK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS  +S +   AD +L    E E+CP+ LAPTTS   QL +GDALA+ LLE R F+
Sbjct: 121 IIAITSNKESFLGEQADFILNAYIEKEACPNNLAPTTSTTAQLVMGDALAVCLLELRGFT 180

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L++  SD + S + +P V    PL + I  +S+K  G  AV+D 
Sbjct: 181 SKDFAKYHPGGSLGKQLYLRVSD-LTSLNELPQVAPETPLKEVIIEISKKMLGVTAVID- 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GIIT+GD+ R   K   +  L+ +D+M KNPK+I  + +   A  ++  + I+ +
Sbjct: 239 ADKIVGIITDGDLRRMLTKVDSMAGLTAKDIMTKNPKLIDNNAMAVEASAIMESNGITQI 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +   +     G+VH  +L + GI+
Sbjct: 299 LAHSEGIYK-GVVHIHNLTKEGIL 321


>gi|300717164|ref|YP_003741967.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299063000|emb|CAX60120.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 320

 Score =  214 bits (544), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/325 (39%), Positives = 189/325 (58%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +  A  +I  E    + L   L  E    F+ A  +I   +G+V+++GIGKSGHI
Sbjct: 1   MKDLILTAARETIETELHEAARLTERLDDE----FYQACRRIHLCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGYAAEFRLMVPLLKDLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD  + +    E+CP GLAPT+SA+  L +GDA+AIAL+ +RN
Sbjct: 117 VSIIAFTGNPSSPLGEGADHCINIHVSKEACPLGLAPTSSAVNTLIMGDAMAIALMRARN 176

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HP G LGT  +C   ++M + + IP V     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPAGSLGTRLLCRVENIMRTEERIPRVNQSATVHDALFELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNIS 315
            + +KL GI T+GD+ R   KD +    ++D M  +P + L      V A+ L +QH IS
Sbjct: 237 ADDRKLAGIFTDGDLRRWLLKDGSLRAQIKDAM-TSPGLSLSAGQHAVEALALFQQHKIS 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              V  D  + IG ++  D+   GI
Sbjct: 296 AAPVTSDAGRVIGAINAHDIREAGI 320


>gi|332882725|ref|ZP_08450336.1| putative arabinose 5-phosphate isomerase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679227|gb|EGJ52213.1| putative arabinose 5-phosphate isomerase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 320

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/322 (40%), Positives = 197/322 (61%), Gaps = 12/322 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E   ++ L   +  +    F  AV+ I   KGRVVITGIGKS  I +K+ 
Sbjct: 7   INIARQTITEEAAAVAKLTDYIDDD----FTQAVDYILHSKGRVVITGIGKSAIIANKIV 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ STGTP+ F+HAA+A HGDLG+I ++D++I +S SG++ E+K ++   +R +  LIA
Sbjct: 63  ATMNSTGTPAIFMHAADAIHGDLGIIQQEDVVICISKSGNTPEIKVLVPLLKRGNNKLIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   SV+A  AD VL    E E+CP+ LAPTTS   QL +GDALA+ LLE ++F  +D
Sbjct: 123 ITSNKGSVLAQQADWVLYAHVEKEACPNNLAPTTSTTAQLVLGDALAVCLLEMKHFGSSD 182

Query: 204 FYVLHPGGKLGT-LFVCASD-VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           F   HPGG LG  L++  SD V+H  +  P V     +   I  +S K  G  AV+D+G 
Sbjct: 183 FAKYHPGGALGKRLYLKVSDIVVH--NQKPEVSPDTDIKKVIVEISAKMLGVAAVIDQGN 240

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            + G++T+GDI R   K   +  L+ +D+M   PK I  D+L   A+ L+ ++ I+ L+V
Sbjct: 241 -IVGVVTDGDIRRMLSKTDTIKGLTAKDIMSVRPKTIDFDSLAIDALNLMEKNKITQLLV 299

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
             D + A GI+H  +L++ G++
Sbjct: 300 TQDGKYA-GIIHLHNLIQEGLL 320


>gi|157164706|ref|YP_001467824.1| arabinose 5-phosphate isomerase [Campylobacter concisus 13826]
 gi|112801833|gb|EAT99177.1| arabinose 5-phosphate isomerase [Campylobacter concisus 13826]
          Length = 317

 Score =  213 bits (543), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 115/297 (38%), Positives = 184/297 (61%), Gaps = 10/297 (3%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S +   AV  I   KG+V++TG+GKSGH+G+K+A+TLASTGTPSFF+H  EA HGDLGMI
Sbjct: 25  SVEIEDAVNLIFNAKGKVIVTGVGKSGHVGAKIAATLASTGTPSFFLHPTEAMHGDLGMI 84

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            +DD+++ +S+SG SDEL  IL + +RF + ++A+     S +   +D  + +  E E+C
Sbjct: 85  EKDDILLAISFSGESDELIKILPHVKRFGVKIVAMARSKTSSLGKFSDAFIDINVEKEAC 144

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGD 228
           P   APT S  + LA+GDALA+ L++ R F + DF   HPGG LG  LF+   DVM S +
Sbjct: 145 PLNAAPTASTTLTLALGDALAVCLMQKRGFKKEDFANFHPGGSLGKRLFLKVKDVMRS-E 203

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++P+V+    L  AI  ++  + G V ++ +   L  ++++GD+ R   ++     +E+ 
Sbjct: 204 NLPIVRWNATLKSAIDTMTHGKLGTVLIIGKDGVLDALLSDGDLRRALMRE--DFDLEEP 261

Query: 289 MIK----NPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +K    +PK I +  +L V A+ L+ ++ I +L VV++    +G++H  DL   G+
Sbjct: 262 AMKFATLHPKEINDKEMLAVDALALIEKYKIQLLAVVENGV-PVGVLHIHDLANLGL 317


>gi|330752411|emb|CBL87362.1| sugar phosphate isomerase, KpsF/GutQ family protein [uncultured
           Flavobacteria bacterium]
          Length = 321

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/295 (40%), Positives = 182/295 (61%), Gaps = 4/295 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F   ++ I    G+++ITGIGKS  I  K+++TL STGT S F+HA++A HGD G+
Sbjct: 29  LDDNFLSVIKLINNSNGKLIITGIGKSAIIAMKISATLNSTGTKSVFIHASDALHGDSGI 88

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I  DD+++ +S SGS+ E+K  +   +      IA+TS  KS ++   D+VL +  E ES
Sbjct: 89  IDMDDVVLFISKSGSTKEIKNFVEIVKTNGNKTIALTSNKKSFLSNKVDLVLNIDIEKES 148

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
            P+ L PTTS   QL +GD +AI L++   F ENDF   HP G LG +       + S D
Sbjct: 149 DPYNLVPTTSTTTQLVLGDTIAICLMKLNEFKENDFAKFHPSGSLGKMLSLKIKQLVSND 208

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVE 286
             P VKI   + + IT ++ K  G  AV+ E +K+ GIIT+GD+ R    +K+L++++ +
Sbjct: 209 KRPNVKIDSKISEIITEITTKLVGATAVI-EDEKVIGIITDGDVRRIIEKNKNLSSITAK 267

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++M  NPK +  D L   A+++LR++NI+ + +V+D +K IGIVH  D+L+ GII
Sbjct: 268 NIMNSNPKKVQCDILAKHALEILRKNNINQI-IVEDKKKYIGIVHIHDILKEGII 321


>gi|220919291|ref|YP_002494595.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957145|gb|ACL67529.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 348

 Score =  213 bits (543), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 120/318 (37%), Positives = 187/318 (58%), Gaps = 11/318 (3%)

Query: 29  RSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R+++ AE R + ++       L   F  AV  I   KGRVV+TG+GK G +  K+++TLA
Sbjct: 37  RTVVEAEARAIGAVP------LDDAFATAVRWILGCKGRVVVTGMGKPGFVAQKISATLA 90

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++    ++AIT++
Sbjct: 91  STGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITAD 150

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             + +A  AD+V+ +    E+CP GLAPT S  + LA+GDA+++ +L +R F   ++ + 
Sbjct: 151 RANRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPFDREEYALF 210

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKG 265
           HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV     L G
Sbjct: 211 HPGGKLGRGLMKVHELMRGESSNPVVREDAPLAAAVAVMTETPGRPGATSVVAADGTLVG 270

Query: 266 IITEGDIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   H + +    V   M + PK +  D L+  A ++LRQ  I  + VVD+ 
Sbjct: 271 IFTDGDLRRLVEHGETDFARPVSSAMCRGPKTVRPDALVVDAARVLRQARIDQVPVVDEA 330

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G++   DLL   I+
Sbjct: 331 GRPVGLLDVQDLLAAKIL 348


>gi|294673206|ref|YP_003573822.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
 gi|294473357|gb|ADE82746.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
          Length = 315

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/285 (41%), Positives = 179/285 (62%), Gaps = 4/285 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  AV  I   KGR VITG+GKSGHIG+K+A+TLASTGTPSFFV+  +A HGDLGM
Sbjct: 26  LTDDFSKAVNLIYNCKGRFVITGVGKSGHIGAKIAATLASTGTPSFFVNPLDAFHGDLGM 85

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
            T DD+++ +S SG++DEL   +      +IP+I ++   +S++A ++   L +  + E+
Sbjct: 86  FTSDDVVLAISNSGNTDELLRFIPLLLERNIPIIGMSGNPESLLAQYSTCHLNIKVKREA 145

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
            P  LAPT+S    LA+GDALA AL+E R+F   DF   HPGG LG   +          
Sbjct: 146 DPLNLAPTSSTTATLAMGDALACALIEIRHFRPEDFAQFHPGGSLGKRLLTKVKNAMVST 205

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSV 285
           ++P+V +   + + I  +S+ + G    VD G K+ G++T+GD+ R      +    L+V
Sbjct: 206 NLPIVTLDQKISETIIEISKTKQGIAVAVDNG-KIAGVVTDGDVRRAMQSKQDIFFELTV 264

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++VM  NPKV+ E+  L+ A +++RQ+NI  L+VV+D Q+ +GI+
Sbjct: 265 KEVMSCNPKVVSENAKLSDAEKMMRQYNIHSLVVVNDTQEFVGII 309


>gi|206580863|ref|YP_002236952.1| gutQ protein [Klebsiella pneumoniae 342]
 gi|288933908|ref|YP_003437967.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|290511011|ref|ZP_06550380.1| GutQ protein [Klebsiella sp. 1_1_55]
 gi|206569921|gb|ACI11697.1| gutQ protein [Klebsiella pneumoniae 342]
 gi|288888637|gb|ADC56955.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|289776004|gb|EFD84003.1| GutQ protein [Klebsiella sp. 1_1_55]
          Length = 321

 Score =  213 bits (542), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 180/302 (59%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A E I   +G+++++GIGKSGHIG KLA+T ASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFIRAAETIIHCEGKLIVSGIGKSGHIGKKLAATFASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D+++ +S+SGS+ EL  I+      SIPL+A+T ++ S +A  A  VL +
Sbjct: 81  HGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKSIPLLAMTGKSTSPLALAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 AVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
            +M   + +P V  G  ++DA+  LS    G VAV DE  +++G+ T+GD+ R       
Sbjct: 201 HLMRRDEEVPRVDAGANVMDAMLELSRTGLGLVAVCDETNRVQGVFTDGDLRRWLVAGGT 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           LN  SV   M +N   +  ++    A + L +H IS   VVD+  + +G ++  +  + G
Sbjct: 261 LND-SVTRAMTRNGVTLQAESRAVEAKERLMKHKISAAPVVDENGQLVGAINLQNFYQAG 319

Query: 340 II 341
           I+
Sbjct: 320 IL 321


>gi|288927559|ref|ZP_06421406.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330393|gb|EFC68977.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 328

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 185/290 (63%), Gaps = 7/290 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AVE +   KG+V++TG+GKSG+IG+K+A+TL+STGTP+FF++  +  HGDLG
Sbjct: 37  QLDHHFDKAVEMMFNCKGKVIVTGVGKSGNIGAKIAATLSSTGTPAFFINPLDVYHGDLG 96

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   +       +PLI ++    S++A ++   +T+  + E
Sbjct: 97  VMTADDVVLALSNSGQTDELLRFIPAILHRDVPLIGMSRNPHSLLAKYSVAHITVKVDKE 156

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALA+AL++ RNF   DF   HPGG+LG  L   A+DVM  
Sbjct: 157 ACPLNLAPTSSTTAALAMGDALAVALMQVRNFKPTDFARFHPGGELGKRLLTTAADVMRV 216

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
            D +P++     L DAI  +S+ + G    V++G K+ G+IT+GDI R   K   +    
Sbjct: 217 -DDLPVIPRQMHLGDAIIQVSKGKLGLGVSVEDG-KIVGLITDGDIRRAMEKWQAEFFNK 274

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
           +V D+M  NPK++L  T +    Q+++++ I  ++V D+ ++ +GIV H+
Sbjct: 275 TVNDIMTTNPKIVLPTTKIADIQQIMQKYKIHTVLVADENERLVGIVDHY 324


>gi|213962152|ref|ZP_03390416.1| arabinose 5-phosphate isomerase [Capnocytophaga sputigena Capno]
 gi|213955158|gb|EEB66476.1| arabinose 5-phosphate isomerase [Capnocytophaga sputigena Capno]
          Length = 320

 Score =  213 bits (542), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/321 (40%), Positives = 196/321 (61%), Gaps = 10/321 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A ++I  E + ++ L   +  +    F  +V+ I   KGRVVITGIGKS  I +K+ 
Sbjct: 7   ITSAKQTITEEAQAIAKLIDYIDDD----FTKSVQYILQSKGRVVITGIGKSAIIANKIV 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ STGTP+ F+HAA+A HGDLG+I +DD++I +S SG++ E+K ++   +R +  LIA
Sbjct: 63  ATMNSTGTPAIFMHAADAIHGDLGIIQQDDVVICISKSGNTPEIKVLVPLLKRGNNKLIA 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ITS   SV+A  AD VL    + E+CP+ LAPTTS   QL +GDALA+ LLE ++F  +D
Sbjct: 123 ITSNKNSVLAQQADSVLYAHVDKEACPNNLAPTTSTTAQLVLGDALAVCLLEMKHFGSSD 182

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L++  SD++ S +  P V     +   I  +SEK  G  AV++  Q 
Sbjct: 183 FAKYHPGGALGKRLYLKVSDIV-SHNQKPEVSPDTDIKKVIVEISEKMLGVTAVLNNHQ- 240

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI+T+GDI R   K   +  L+ +D+M  NPK I  D L   A+ L+ ++ I+ L+  
Sbjct: 241 IVGIVTDGDIRRMLSKTDSIKGLTAKDIMSVNPKTIEVDCLAIDALHLMEKNKITQLLAT 300

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
              +  +GI+H  +L++ G+I
Sbjct: 301 KQGE-YVGIIHLHNLIQEGLI 320


>gi|326336565|ref|ZP_08202734.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691230|gb|EGD33200.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 321

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/296 (40%), Positives = 181/296 (61%), Gaps = 6/296 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  +VE I   KGRV+ITGIGKS  I  K+ +T+ STGTPS F+HAA+A HGDLG+
Sbjct: 29  LDENFIKSVEVILHAKGRVIITGIGKSAIIAQKIVATMNSTGTPSIFMHAADAIHGDLGI 88

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I   D++I +S SG++ E+K ++   +R   PLIAIT+  +S +A  +D VL      E+
Sbjct: 89  IQEGDVVICISKSGNTPEIKVLVPLLKREGNPLIAITANRESFLATQSDYVLYAYTHQEA 148

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP+ LAPTTS   QL IGDAL++AL+  + F   DF   HPGG LG  L++   D + + 
Sbjct: 149 CPNNLAPTTSTTSQLVIGDALSVALMRMKQFGSQDFAKYHPGGALGKRLYLTVGDAI-AK 207

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
           + +P V     +   I  +S+K  G  AV+ EG+ + G+IT+GDI R  + ++D+  L  
Sbjct: 208 NQVPAVAPDTDIKQVIVEISQKMLGVTAVL-EGETIVGVITDGDIRRMLSHYEDIKGLKA 266

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +D+M  +PK +    L   A+ L++ H I+ L+V  +    IG++H  +L++ GII
Sbjct: 267 KDIMSLHPKTVEAGVLAVDALDLMQNHKITQLLVTKEGH-YIGVIHLHNLIQEGII 321


>gi|254362562|ref|ZP_04978662.1| possible sugar phosphate isomerase [Mannheimia haemolytica PHL213]
 gi|261494714|ref|ZP_05991194.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153094165|gb|EDN75058.1| possible sugar phosphate isomerase [Mannheimia haemolytica PHL213]
 gi|261309679|gb|EEY10902.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. OVINE]
          Length = 311

 Score =  213 bits (541), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/294 (40%), Positives = 181/294 (61%), Gaps = 9/294 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   LS +F+  V  I A +GRVV+ GIGKSG +G K+ +T ASTGTPSFF+H  EA H
Sbjct: 20  TLNHRLSEEFNEVVNMILACQGRVVVGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D++I++S SG +D++  ++   + F   +IA+T    S +  +AD++L + 
Sbjct: 80  GDLGMLKPIDMVILISNSGETDDVNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIG 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+C + LAPT+S ++ +A+GDALAIAL+++R+F   DF   HPGG LG  L     D
Sbjct: 140 VEREACLNNLAPTSSTLVTMALGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---- 278
           VM     +P   +     + +++++E R G VAV+ +  KL+GIIT+GDI R   K    
Sbjct: 200 VMVR--KVPTASLDTTFTECLSVMNEGRMG-VAVIMQDDKLEGIITDGDIRRTLAKFGAE 256

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            LN  + +++M +NPK I +   L  A  L+++  I  L+ V+D  K  G++ F
Sbjct: 257 SLNK-TADEIMTRNPKTINDTEFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEF 309


>gi|197124568|ref|YP_002136519.1| KpsF/GutQ family protein [Anaeromyxobacter sp. K]
 gi|196174417|gb|ACG75390.1| KpsF/GutQ family protein [Anaeromyxobacter sp. K]
          Length = 348

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 119/313 (38%), Positives = 186/313 (59%), Gaps = 11/313 (3%)

Query: 29  RSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R+++ AE R + ++       L   F  AV  I   KGRVV+TG+GK G +  K+++TLA
Sbjct: 37  RTVVEAEARAIGAVP------LDDAFATAVRWILGCKGRVVVTGMGKPGFVAQKISATLA 90

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++    ++AIT++
Sbjct: 91  STGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGAKIVAITAD 150

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             + +A  AD+V+ +    E+CP GLAPT S  + LA+GDA+++ +L +R F   ++ + 
Sbjct: 151 RANRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPFDREEYALF 210

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKG 265
           HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV     L G
Sbjct: 211 HPGGKLGRGLMKVHELMRGEASNPVVREDAPLAAAVAVMTETPGRPGATSVVAADGTLVG 270

Query: 266 IITEGDIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   H + + +  V   M + PK +  D L+  A ++LRQ  I  + VVD+ 
Sbjct: 271 IFTDGDLRRLVEHGEADFSRPVGSAMCRGPKTVRPDALVVDAARVLRQARIDQVPVVDEA 330

Query: 324 QKAIGIVHFLDLL 336
            + +G++   DLL
Sbjct: 331 GRPVGLLDVQDLL 343


>gi|302345394|ref|YP_003813747.1| putative arabinose 5-phosphate isomerase [Prevotella melaninogenica
           ATCC 25845]
 gi|302148993|gb|ADK95255.1| putative arabinose 5-phosphate isomerase [Prevotella melaninogenica
           ATCC 25845]
          Length = 323

 Score =  213 bits (541), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 187/310 (60%), Gaps = 14/310 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           QC      A    ++ L+ +    +S  FHC         G+V++TG+GKSG+IG+K+A+
Sbjct: 17  QCIKEEAEATLNLINQLDENFDKAVSLMFHCT--------GKVIVTGVGKSGNIGAKIAA 68

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I +
Sbjct: 69  TLSSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGM 128

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++   S++A ++   L +  E E+CP  LAPT+S    L +GDALAIAL+  RNF   DF
Sbjct: 129 SANPNSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAIALMRVRNFKPQDF 188

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG+LG  L   A DVM S D +P++     L +AI  +S+ + G    +D G K+
Sbjct: 189 AQFHPGGELGKRLLTTAQDVMRS-DELPIIPKDMHLGEAIIHVSKGKLGLGVSLDNG-KV 246

Query: 264 KGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            G+IT+GDI R    +  +    +V D+M + PK++L  T +T   Q+++Q+ +  ++V 
Sbjct: 247 IGLITDGDIRRAMERWQAEFFDHTVSDIMTREPKIVLPTTKITEIQQIMQQNKVHTVLVC 306

Query: 321 DDCQKAIGIV 330
           D+ +  +G+V
Sbjct: 307 DEERHFLGVV 316


>gi|319789444|ref|YP_004151077.1| KpsF/GutQ family protein [Thermovibrio ammonificans HB-1]
 gi|317113946|gb|ADU96436.1| KpsF/GutQ family protein [Thermovibrio ammonificans HB-1]
          Length = 277

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/272 (45%), Positives = 176/272 (64%), Gaps = 4/272 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +V+TG+GKSG +  K+A+TLASTGTP+FF+H  +A+HGDLGM+  +D +I +S SG + E
Sbjct: 1   MVLTGVGKSGLVCKKIAATLASTGTPAFFLHPTDAAHGDLGMLKGEDTVIAVSNSGETAE 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L +I+   + F IP+IAITS  +S +A  AD+ + L  E E+CP  LAPT+S    LA+G
Sbjct: 61  LLSIIPLIKSFGIPVIAITSNPESTLAKVADVTINLGVEKEACPLNLAPTSSTTATLALG 120

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALA AL++ + F+  DF  LHPGGKLG       ++MH G  +P V     L +AI  +
Sbjct: 121 DALAAALVKVKGFTSEDFARLHPGGKLGVRLARVKELMHKGGEVPQVPPEATLKEAIIEM 180

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           S K+ G   V D G++L GI T+GD+ R   +  DLNT  ++++M +NPK I ED     
Sbjct: 181 SAKKLGATLVKD-GERLLGIFTDGDLRRALERGADLNT-PIKEIMTENPKTIREDAFGEE 238

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           A++L+  H I+VL VVD   +  GIVH  D+L
Sbjct: 239 ALRLMELHKITVLPVVDGEGRVTGIVHLHDIL 270


>gi|308273440|emb|CBX30042.1| Uncharacterized phosphosugar isomerase aq_1546 [uncultured
           Desulfobacterium sp.]
          Length = 325

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/299 (41%), Positives = 183/299 (61%), Gaps = 3/299 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   ++  F   VE I   KGR++++GIGKSG IG K+ +TL STGT SFF+H  EA H
Sbjct: 19  NLIDRINNSFAEMVELIYKSKGRLIVSGIGKSGIIGRKIVATLNSTGTRSFFLHPVEAMH 78

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+G++ +DD+++ LS SG +DEL  ++   R+    +IA T   KS +A H+DIV+ + 
Sbjct: 79  GDVGLVCKDDILLALSNSGETDELNILIPTIRKIGCKVIAFTGNIKSTLAKHSDIVIDIG 138

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP GLAPTTS    LA+GDALA+ L+  + F  +DF  +HPGG LG  L     D
Sbjct: 139 VEKEACPLGLAPTTSTTALLAMGDALAVTLINKKKFKSSDFKKVHPGGVLGQRLSEMVKD 198

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M +G+++P V  G  +I+AI  +     G   V+++   L GIIT+GDI R   K++N 
Sbjct: 199 IMLTGEALPAVLKGVSMIEAIRKIDSGGLGVSLVLEKDGTLAGIITDGDIRRMIVKNMNV 258

Query: 283 --LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             L  EDVM +NP+    D+    A+ L+ +  I+VL + D   K +G++H  D+L  G
Sbjct: 259 HELKAEDVMTQNPRTAKPDSPAYDALYLMEKFQITVLPITDPDNKILGVLHLHDILGKG 317


>gi|288803370|ref|ZP_06408803.1| arabinose-5-phosphate isomerase [Prevotella melaninogenica D18]
 gi|288334190|gb|EFC72632.1| arabinose-5-phosphate isomerase [Prevotella melaninogenica D18]
          Length = 316

 Score =  212 bits (540), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 117/310 (37%), Positives = 187/310 (60%), Gaps = 14/310 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           QC      A    ++ L+ +    +S  FHC         G+V++TG+GKSG+IG+K+A+
Sbjct: 10  QCIKEEAEATLNLINQLDENFDKAVSLMFHCT--------GKVIVTGVGKSGNIGAKIAA 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I +
Sbjct: 62  TLSSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGM 121

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++   S++A ++   L +  E E+CP  LAPT+S    L +GDALAIAL+  RNF   DF
Sbjct: 122 SANPNSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAIALMRVRNFKPQDF 181

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG+LG  L   A DVM S D +P++     L +AI  +S+ + G    +D G K+
Sbjct: 182 AQFHPGGELGKRLLTTAQDVMRS-DELPIIPKDIHLGEAIIHVSKGKLGLGVSLDNG-KV 239

Query: 264 KGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            G+IT+GDI R    +  +    +V D+M + PK++L  T +T   Q+++Q+ +  ++V 
Sbjct: 240 IGLITDGDIRRAMERWQAEFFDHTVSDIMTREPKIVLPTTKITEIQQIMQQNKVHTVLVC 299

Query: 321 DDCQKAIGIV 330
           D+ +  +G+V
Sbjct: 300 DEERHFLGVV 309


>gi|91201159|emb|CAJ74218.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 329

 Score =  212 bits (540), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 114/292 (39%), Positives = 181/292 (61%), Gaps = 7/292 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV+ I    GRV +TG+GK+G IG K+++TLASTGTPS+++H++EA HGDLG I   
Sbjct: 39  FQKAVDIIFTCSGRVAVTGVGKAGIIGQKISATLASTGTPSYWIHSSEARHGDLGKIVAS 98

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ LS SG + E+  +L + ++    +I++T  NKS +A H+D+VL +    E+CP G
Sbjct: 99  DIVLALSNSGET-EVVLLLPFLKQMGTKIISVTGNNKSSLALHSDVVLDIGNVEEACPLG 157

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +AP++S    LAIGDA+A+ + + RN S+ ++   HPGG+LG   +    VM  G   P+
Sbjct: 158 IAPSSSTTAMLAIGDAIALTIFKKRNLSKEEYAFYHPGGELGRKLLPVEVVMRKGRENPV 217

Query: 233 VKIGCPLIDAITILSEKRF--GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDV 288
                PL+D + I++E +   G V++VD+  +L G  T+GD+ R   +  + L  ++++V
Sbjct: 218 ADEDMPLLDVLGIMTETKGNPGAVSIVDKNNRLTGFFTDGDLRRLLREGTSFLCKTIKEV 277

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL--RF 338
           M   PKVI    L+  A ++LR++ I  + VV+D    +GI    DLL  RF
Sbjct: 278 MTPFPKVINNRCLVEEAYKILRENKIDQIPVVNDFHTPVGIFDVQDLLEVRF 329


>gi|170720579|ref|YP_001748267.1| KpsF/GutQ family protein [Pseudomonas putida W619]
 gi|169758582|gb|ACA71898.1| KpsF/GutQ family protein [Pseudomonas putida W619]
          Length = 310

 Score =  212 bits (539), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/311 (39%), Positives = 182/311 (58%), Gaps = 10/311 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  +++A+ + + +L       L+  F  AVE + + KGR V+ G+GKSG IG K+ +T 
Sbjct: 7   AKEALLAQAKAVETLAE----RLNESFQRAVELLLSCKGRAVVCGMGKSGLIGQKMVATF 62

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG ++EL  ++   + F   LI+IT 
Sbjct: 63  ASTGTPSFFLHPAEAFHGDLGMLKPVDVLILISYSGETEELIKLIPSLKSFGNKLISITG 122

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A H+DI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F   DF  
Sbjct: 123 NGTSTLAKHSDIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKPMDFAR 182

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L     DVMHS    P+V       D +  +++ R G +A+V E Q+L G
Sbjct: 183 YHPGGSLGRKLLTRVKDVMHS--PAPIVGRETSFHDCLLAMTQSRLG-LAIVMEEQRLVG 239

Query: 266 IITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+GD+ R   ++   +   V   M   P  I+ED  L+ A   +R++ I  L V +  
Sbjct: 240 IVTDGDLRRALLENERIVREKVAQFMTAKPHTIMEDAQLSEAELYMRENKIRALAVTNSQ 299

Query: 324 QKAIGIVHFLD 334
              +G+V   D
Sbjct: 300 GGVVGVVEIFD 310


>gi|323698352|ref|ZP_08110264.1| KpsF/GutQ family protein [Desulfovibrio sp. ND132]
 gi|323458284|gb|EGB14149.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans ND132]
          Length = 338

 Score =  212 bits (539), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/309 (41%), Positives = 187/309 (60%), Gaps = 8/309 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  GL ++   L G     F  A+  +    GRVV+TG+GKSG +G K+A+TL+STGTPS
Sbjct: 21  EAEGLRAVHDQLDG----AFVEALTAMAKCTGRVVVTGLGKSGLVGRKIAATLSSTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  E +HGDLGMI  +D+I+ LS SG++DE+ AIL   +     +IA+TS+  S +A
Sbjct: 77  FFLHPVEGAHGDLGMIRDEDVILALSNSGATDEVNAILPTLKSLGAKVIAMTSDPASPMA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             ADI + +    E+C  GLAPT+S   QLA+GDALA+ L++ ++F ++DF   HPGG L
Sbjct: 137 GLADIHILVHVPREACRMGLAPTSSTTAQLAVGDALAVCLMDWKSFGKDDFKRFHPGGSL 196

Query: 214 GT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L  C   +MH+ D +P+V     L  A++ L++   G VAVVD   +LKG++T+GD+
Sbjct: 197 GQRLATCVDQLMHT-DGLPVVLEDAGLDAALSTLNKGGLGLVAVVDALDRLKGVLTDGDV 255

Query: 273 FRNF-HKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     +L+T   V +VM  +P+           + L+ +  I+VL VV D  +  G+V
Sbjct: 256 RRLVCAGELDTARPVREVMTVSPRRATAGESSAGVLDLMERSQITVLPVVRDDGRLAGMV 315

Query: 331 HFLDLLRFG 339
           H  DLL  G
Sbjct: 316 HLHDLLGKG 324


>gi|282881292|ref|ZP_06289976.1| sugar isomerase, KpsF/GutQ family [Prevotella timonensis CRIS
           5C-B1]
 gi|281304837|gb|EFA96913.1| sugar isomerase, KpsF/GutQ family [Prevotella timonensis CRIS
           5C-B1]
          Length = 324

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 180/287 (62%), Gaps = 6/287 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AVE +   KG++++TG+GKSGHIG+K+A+TL+STGTP+FF++  +  HGDLG
Sbjct: 33  QLDEHFEKAVELMFNCKGKIIVTGVGKSGHIGAKIAATLSSTGTPAFFINPLDVYHGDLG 92

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   L       +P+++I+    S++A ++   +    + E
Sbjct: 93  VMTPDDVVLALSNSGQTDELLRFLPMVLHMKVPVVSISRNAHSLLAKYSTTHILCSVKKE 152

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALAIAL++ R F  NDF   HPGG+LG  L   A+DVM S
Sbjct: 153 ACPLNLAPTSSTTAALAMGDALAIALMKVRKFKPNDFAQFHPGGELGKRLLTTAADVMRS 212

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
            D++P++     L DAI  +S+ + G + V  E +++ G+IT+GDI R   K        
Sbjct: 213 -DNLPIIPKEMHLGDAIIHVSKGKLG-LGVSLENEQVVGLITDGDIRRAMEKWQAQFFDK 270

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V D+M  NPK +   T +T   +++ Q+ I  ++VVD+    +GIV
Sbjct: 271 TVSDIMTTNPKTVAPSTKITEIQRIMHQYKIHTVLVVDEANHLLGIV 317


>gi|229541725|ref|ZP_04430785.1| KpsF/GutQ family protein [Bacillus coagulans 36D1]
 gi|229326145|gb|EEN91820.1| KpsF/GutQ family protein [Bacillus coagulans 36D1]
          Length = 325

 Score =  212 bits (539), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 186/297 (62%), Gaps = 6/297 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  ++F+ +  +E I A +GRV+ TG+GKSG IG KLAST ASTGTP+FF+H  EA HG
Sbjct: 29  LKDRINFRINEGIEMILACEGRVIFTGMGKSGIIGRKLASTFASTGTPAFFLHPGEALHG 88

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG IT++D++I +S SG + E+  ++   +R    +IAI+   KS +A  +++V+ + +
Sbjct: 89  DLGKITKEDILIAISNSGETSEILNMIPSIKRIGAKMIAISGSRKSTLARRSNLVMDIGE 148

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CP GLAPT++  + LA+GDA+A+ALL++R+F   +F + HPGG LG  L +    V
Sbjct: 149 VEEACPLGLAPTSTTTVTLALGDAIAVALLKARDFKPENFALFHPGGSLGRRLLLTVGHV 208

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDL 280
                  P+  +   + +A+ +++E   G V+V+D+  +L GI+T+GDI R   N H+ L
Sbjct: 209 AKRKSMNPVAGMDTGIKEALFMMTEAGAGAVSVIDDRGRLAGILTDGDIRRELLNGHEVL 268

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   V D+  K P  + E  L   A++++  H   VL VV   QK + ++H  DL++
Sbjct: 269 DK-KVADLYTKYPVCVSEHQLAAEALRIMEDHAFKVLPVVTG-QKPVAMLHIQDLVQ 323


>gi|78355382|ref|YP_386831.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217787|gb|ABB37136.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 334

 Score =  211 bits (538), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 125/310 (40%), Positives = 187/310 (60%), Gaps = 9/310 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E  G++++   L G     F  A+  +    GRVVITG+GKSG +G KLA+TL+STGTP+
Sbjct: 24  EIEGIAAMRDRLNG----GFVDALTLMARCTGRVVITGLGKSGLVGRKLAATLSSTGTPA 79

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  E +HGD+GM+  DD+II +S SG +DEL AIL   R     LIA+T   +S +A
Sbjct: 80  FFLHPVEGAHGDMGMLRSDDVIIAISNSGETDELNAILPALRSLGASLIAMTGGLESTLA 139

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+VL      E+CP  LAPT S    LA+GDALA+ L+  ++F+ENDF   HPGG L
Sbjct: 140 KSADVVLDTGVRREACPLNLAPTASTTAVLAMGDALAVCLIHWKSFTENDFLRFHPGGSL 199

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +    +MH+ +++P+V+      +A+ +L E R G V V D   +L GI+T+GD+
Sbjct: 200 GHRLSMRVESLMHT-ENLPVVRETVRTGEALRVLDEGRLGTVLVTDGQGRLSGILTDGDV 258

Query: 273 FRNFHKD--LNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R   ++  + T S V +VM+++P    ++  +   + ++ +  I+VL +  D    +G+
Sbjct: 259 RRMVCREAGVETASPVANVMVRSPLTARKEFSVAQLIDMMEERAITVLPITGDDGLLLGV 318

Query: 330 VHFLDLLRFG 339
           VH  DLL  G
Sbjct: 319 VHLHDLLGKG 328


>gi|330995728|ref|ZP_08319626.1| arabinose 5-phosphate isomerase [Paraprevotella xylaniphila YIT
           11841]
 gi|329574787|gb|EGG56348.1| arabinose 5-phosphate isomerase [Paraprevotella xylaniphila YIT
           11841]
          Length = 316

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/291 (41%), Positives = 180/291 (61%), Gaps = 9/291 (3%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AV+ +    G+V+ITG+GKSGHIG+K+A+TLASTGTP+FF++  +  HGDLG
Sbjct: 25  QLDEHFDAAVDLMLRCTGKVIITGVGKSGHIGAKMAATLASTGTPAFFINPLDVFHGDLG 84

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD++I +S SG +DEL   + Y     IPLI I+    S++A ++   L +    E
Sbjct: 85  VMTPDDVVIAISNSGQTDELLRFIPYLLEHHIPLIGISGNPDSLLAKYSTCHLVVKVSHE 144

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALA AL+E R+F   DF   HPGG LG  L   A DVM S
Sbjct: 145 ACPLNLAPTSSTTATLAMGDALACALIEMRHFQAKDFAQFHPGGTLGKRLLTTAHDVMRS 204

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
            D +P++  G  L +AI  +S+ + G CVA+V++  K+ G+IT+GD+ R   +       
Sbjct: 205 ND-LPVIPPGMKLGEAIIHVSKGKLGLCVAMVND--KVVGLITDGDVRRAMESLQDKFFN 261

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
           + VE VM + PK +  DT +     ++  + I  ++VVDD +  +G+V HF
Sbjct: 262 VPVEQVMTRTPKCVSPDTKIAKIQDIMHNNKIHTVLVVDDDRHLLGVVDHF 312


>gi|222823333|ref|YP_002574907.1| arabinose-5-phosphate isomerase [Campylobacter lari RM2100]
 gi|222538555|gb|ACM63656.1| arabinose-5-phosphate isomerase [Campylobacter lari RM2100]
          Length = 318

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 181/288 (62%), Gaps = 7/288 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+ +F  AVE I +IKGR V++G+GKSGH+G+K+A+TLASTGTPSFF+H  EA HGDLGM
Sbjct: 28  LNEEFSKAVELILSIKGRCVVSGMGKSGHVGAKIAATLASTGTPSFFMHPGEALHGDLGM 87

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I  +D+++ +S SG ++E+  ++   ++  IPLI +  +  S +A  AD+ + +  + E+
Sbjct: 88  IASEDVLLAISNSGETEEVLKLIPVIKKRKIPLIVMAGDQNSTLAKQADVFINIAVKKEA 147

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP  LAPT+S    LA+GDA+A+AL+++RNF  +DF + HPGG LG  L     D+M S 
Sbjct: 148 CPLQLAPTSSTTATLAMGDAIAVALMKARNFKPDDFALFHPGGSLGRKLLTKVGDLMVSS 207

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLS 284
           + +P+V       + + +++  + G   VV E +KL GIIT+GD+ R      K      
Sbjct: 208 N-LPIVSPNSEFNELVDVMTSGKLGLCIVV-ENEKLVGIITDGDLRRALRANDKPRFDFK 265

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++M ++PK I    + + A +L+ +H I  ++V  + +K  GI+  
Sbjct: 266 AKEIMSESPKTIEASAMASEAEELMLKHKIKEIVVTQN-EKIAGIIQL 312


>gi|71083203|ref|YP_265922.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062316|gb|AAZ21319.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 323

 Score =  211 bits (538), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/327 (38%), Positives = 192/327 (58%), Gaps = 10/327 (3%)

Query: 19  MKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK    +   +S+I  E + L  L+ S+       F+ AVE +   + +V++ G+GKSG 
Sbjct: 1   MKKRNYKKIAKSVIDLEIKALKKLKDSINNS----FNEAVESLANCQSKVILCGVGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+++TL+S GTPSF + A + SHGDLG I++ D++I++S+SGS++ELK I+ YA R 
Sbjct: 57  IAAKISATLSSVGTPSFSLSANDCSHGDLGSISKKDILILISYSGSTEELKNIIKYANRN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I LI I S+  S++   +DI L +P+  E+   G+ PT+S I QL+IGDALA+A+L  +
Sbjct: 117 KITLIGIMSKKNSILYKASDIKLLIPEVTEAGL-GIVPTSSTINQLSIGDALAVAVLNKK 175

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N ++ DF   HP G LG       ++M +G  IP V     +  A+ I+S K+ G + V 
Sbjct: 176 NINKKDFKKFHPSGNLGAQLRTVEELMITGKKIPFVNESLNMKKALQIISNKKLGTLIVQ 235

Query: 258 DEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +  +   GIIT+G I R      +L  LSV+ VM KNP  I  DTL   A+ ++    I+
Sbjct: 236 NNKKITTGIITDGQIRRVNAMSNNLQDLSVKKVMTKNPISINLDTLAEKALSIMNAKKIT 295

Query: 316 VLMVVDD--CQKAIGIVHFLDLLRFGI 340
            L V  D   +K IGI+H  ++L   I
Sbjct: 296 SLCVHKDKNKKKTIGILHIHNILHSNI 322


>gi|86140389|ref|ZP_01058948.1| carbohydrate isomerase, KpsF/GutQ family protein [Leeuwenhoekiella
           blandensis MED217]
 gi|85832331|gb|EAQ50780.1| carbohydrate isomerase, KpsF/GutQ family protein [Leeuwenhoekiella
           blandensis MED217]
          Length = 322

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 131/321 (40%), Positives = 194/321 (60%), Gaps = 9/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E   +++L + +  + +    C    I   KGRV+I+G+GKS  I  K+ 
Sbjct: 8   LDSAKRTIAMELEAVANLHTLIDQDFAKAVSC----IYNAKGRVIISGVGKSAIIAQKIV 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+HAA+A HGDLG I ++D++I LS SG++ E+K ++   +     +IA
Sbjct: 64  ATLNSTGTPAVFMHAADAIHGDLGTIQKEDVVICLSNSGNTAEIKVLIPLIKNQENTVIA 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +TS   S +A +AD ++    E E+CPH LAPTTS  +QL +GDALA+ALL+ R FS+ D
Sbjct: 124 MTSNKDSFLAKNADGLILAYAEKEACPHNLAPTTSTTVQLVMGDALALALLDLRGFSKED 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  +++  SD+    D  P V    P+   I  +S+KR G  AV  +  K
Sbjct: 184 FAKYHPGGALGKKMYLRVSDLTALNDK-PEVAPDTPIKAVIIEISQKRLGVTAVTKD-DK 241

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GIIT+GDI R   K+  L  L+ E +M KNPK I  D + T A+ +L  ++I+ L+ V
Sbjct: 242 IVGIITDGDIRRMLEKNEVLTGLTAESIMSKNPKQITTDAMATEALDILETNSITQLLAV 301

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D      G+VH  DL++ GI+
Sbjct: 302 DHDNNYAGVVHLHDLIKEGIL 322


>gi|307565622|ref|ZP_07628100.1| putative arabinose 5-phosphate isomerase [Prevotella amnii CRIS
           21A-A]
 gi|307345654|gb|EFN91013.1| putative arabinose 5-phosphate isomerase [Prevotella amnii CRIS
           21A-A]
          Length = 324

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/294 (39%), Positives = 185/294 (62%), Gaps = 6/294 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AV+ I   KG+V++TG+GKSG+IG+K+A+TL+STGTP+FFV+  +A H
Sbjct: 28  ALINQLDDNFDKAVKLIYDCKGKVIVTGVGKSGNIGAKIAATLSSTGTPAFFVNPLDAYH 87

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++T+DD+++ LS SG +DEL   +    + ++P+I I++   S++A ++ + + + 
Sbjct: 88  GDLGVMTKDDVVLALSNSGQTDELLRFIPILLQMTVPIIGISANTDSLLAKYSTVHIKVW 147

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP  LAPT+S    L +GDALA+AL+  RNF   DF   HPGG LG  L   A D
Sbjct: 148 VEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPKDFAQFHPGGSLGKRLLTTAQD 207

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKD 279
           VM + +S+P++     L DAI  +S+ + G    +D+  K+ G+IT+GDI R    +  +
Sbjct: 208 VMQA-ESLPIIPKEMHLGDAIIHVSKGKLGLGVSLDKDNKVIGLITDGDIRRAMEQWQAE 266

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
               +VED+M K PK +L  T +      ++++ I  ++V D  +  +GIV H+
Sbjct: 267 FFDKTVEDIMTKEPKSVLPITKIADIQATMQKYKIHTVLVCDANKHLLGIVDHY 320


>gi|163854758|ref|YP_001629056.1| NDP-sugar epimerase [Bordetella petrii DSM 12804]
 gi|163258486|emb|CAP40785.1| NDP-sugar epimerase [Bordetella petrii]
          Length = 329

 Score =  211 bits (537), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/324 (41%), Positives = 186/324 (57%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + ++ A R++  E + ++ L +     L   F   V+ + A +GRVV++GIGK+GHI  
Sbjct: 10  GAALESARRTLHIEAQAIADLSA----RLDDSFARVVDMLLACRGRVVVSGIGKTGHIAR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA HGDLGMITRDD++I +S SGS  EL  IL  ARR    
Sbjct: 66  KIAATLASTGTPAFFVHAAEAIHGDLGMITRDDVLIAISHSGSGQELLTILPAARRMGAG 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+AIT    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F 
Sbjct: 126 LVAITGNPASELARLADLHLDTSVAQEACPLNLAPTASTTAALALGDALAVACLEARGFG 185

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L     DVM  G ++P V     L  A+  +S K  G   V+D 
Sbjct: 186 PEDFARSHPGGTLGRRLLTHVRDVMRQGAALPTVSEQSALFPALEEMSAKGMGMTIVLDA 245

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K  GI T+GD+ R    H D+  L+V   M + P+ I  D L   A + + +  ++ +
Sbjct: 246 AGKPTGIFTDGDLRRLIERHGDIRNLTVAQGMTRMPRSIGPDALAVEAARQMDEQRLNQM 305

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D     +G +H  DL+   ++
Sbjct: 306 LVLDSDGALLGALHMHDLMAAKVV 329


>gi|119944389|ref|YP_942069.1| KpsF/GutQ family protein [Psychromonas ingrahamii 37]
 gi|119862993|gb|ABM02470.1| KpsF/GutQ family protein [Psychromonas ingrahamii 37]
          Length = 319

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/288 (39%), Positives = 181/288 (62%), Gaps = 5/288 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  ++  A+  +K   GR+++ G+GKSGHIG K+++TLAS GTPSF++H  EA HGDLGM
Sbjct: 33  LGDEYLQALALMKNCTGRIIVCGMGKSGHIGKKISATLASLGTPSFYMHPGEAFHGDLGM 92

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +T++DL++++S+SG +DEL  I+   +     +I+IT    S +A ++D+VL    E E+
Sbjct: 93  VTQNDLLLLISYSGETDELLKIIPSIQHSGNKIISITGGLNSTLAKNSDVVLDASVEKET 152

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSG 227
           CP+ LAPTTS  + L IGDALA  L   +NFS  DF   HPGG LG  L     + M + 
Sbjct: 153 CPNNLAPTTSTTLSLVIGDALASTLTLEKNFSPMDFARFHPGGSLGKRLLTFVKNEMRT- 211

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           + +PLV+    L DA+ +++E R G   V++EG  L+G+IT+GD+ R     + +   + 
Sbjct: 212 EKLPLVQAQTSLTDALMVMTETRTGLALVMEEG-NLQGVITDGDVRRFLISGQSIADCTA 270

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + +M  +P  I  +  LT A +L+R+ +I  L+V +D +K  GI+ ++
Sbjct: 271 QQLMNSSPCFISPNARLTEAEELMREKHIKWLVVSEDGKKLDGIIEWV 318


>gi|261491816|ref|ZP_05988395.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261312471|gb|EEY13595.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 311

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/294 (39%), Positives = 180/294 (61%), Gaps = 9/294 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L   LS +F+  V  I A +GRVV+ GIGKSG +G K+ +T ASTGTPSFF+H  EA H
Sbjct: 20  TLNHRLSEEFNEVVNMILACQGRVVVGGIGKSGLVGKKMVATFASTGTPSFFLHPTEAFH 79

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGM+   D++I++S SG +D++  ++   + F   +IA+T    S +  +AD++L + 
Sbjct: 80  GDLGMLKPIDMVILISNSGETDDVNKLIPSLKNFGNKIIAMTGNPYSTLGRNADVILNIG 139

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASD 222
            E E+C + LAPT+S ++ +A+GDALAIAL+++R+F   DF   HPGG LG  L     D
Sbjct: 140 VEREACLNNLAPTSSTLVTMALGDALAIALMKARDFRPEDFARYHPGGSLGRKLLNRVRD 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---- 278
           VM     +P   +     + +++++E R G  AV+ +  KL+GIIT+GDI R   K    
Sbjct: 200 VMVR--KVPTASLDTTFTECLSVMNEGRMGG-AVIMQDDKLEGIITDGDIRRTLAKFGAE 256

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            LN  + +++M +NPK I +   L  A  L+++  I  L+ V+D  K  G++ F
Sbjct: 257 SLNK-TADEIMTRNPKTINDTEFLAKAEDLMKELKIHSLIAVNDEGKVTGLMEF 309


>gi|91762367|ref|ZP_01264332.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718169|gb|EAS84819.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 323

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 118/300 (39%), Positives = 182/300 (60%), Gaps = 5/300 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  ++  F  AVE +   + +V++ G+GKSG I +K+++TL+S GTPSF + A + SHG
Sbjct: 24  LKNSINNSFSEAVESLANCQSKVILCGVGKSGLIAAKISATLSSVGTPSFSLSANDCSHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG I++ D++I++S+SGS++ELK I+ YA R  I LI I S+  S++   +DI L +P+
Sbjct: 84  DLGSISKKDVLILISYSGSTEELKNIIKYANRNKITLIGIMSKKNSILYKASDIKLLIPE 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E+   G+ PT+S I QL+IGDALA+A+L  +N ++ DF   HP G LG       ++M
Sbjct: 144 VTEA-GLGIVPTSSTINQLSIGDALAVAVLNKKNINKKDFKKFHPSGNLGAQLRTVEELM 202

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNT 282
            +G+ IP V     +  A+ I+S K+ G + V +  +   GIIT+G I R      +L  
Sbjct: 203 ITGNKIPFVNESLNMKKALQIISNKKLGTLIVQNNKKITTGIITDGQIRRVNAMSNNLQD 262

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRFGI 340
           LSV+ VM KNP  I  DTL   A+ ++    I+ L V  D   +K +GI+H  ++L   I
Sbjct: 263 LSVKKVMTKNPISINLDTLAEKALSIMNAKKITSLCVHKDKNKKKTVGILHIHNILHSNI 322


>gi|238752460|ref|ZP_04613936.1| hypothetical protein yrohd0001_22320 [Yersinia rohdei ATCC 43380]
 gi|238709309|gb|EEQ01551.1| hypothetical protein yrohd0001_22320 [Yersinia rohdei ATCC 43380]
          Length = 290

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 125/287 (43%), Positives = 174/287 (60%), Gaps = 2/287 (0%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A E + A  G+ V++GIGKSGHIG K+AS+LASTGTP+FFVH AEA HGDLGMI + D++
Sbjct: 3   ACELLLACTGKAVVSGIGKSGHIGKKIASSLASTGTPAFFVHPAEALHGDLGMIGQQDVL 62

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E+CP GLAP
Sbjct: 63  IFISYSGRAKELDMILPLLADSHIPVIAITGSKESPLAQGAACVLDISVEHEACPMGLAP 122

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T+SA+  L +GDALA+AL+  R F+ +DF   HPGG LG  L      +M +G+ +P+VK
Sbjct: 123 TSSAVNTLMMGDALAMALMRHRGFNADDFARSHPGGSLGARLLNRVHHLMRTGERLPVVK 182

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        +  I  P 
Sbjct: 183 ESDTVMEAMLELSRTGLGLVAVCDPQQRVVGVFTDGDLRRWLVKGGTLQQPLEPAITRPG 242

Query: 295 VIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             L E      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 243 YRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGAINLHDLHQAGV 289


>gi|270264686|ref|ZP_06192951.1| hypothetical protein SOD_i01030 [Serratia odorifera 4Rx13]
 gi|270041369|gb|EFA14468.1| hypothetical protein SOD_i01030 [Serratia odorifera 4Rx13]
          Length = 323

 Score =  211 bits (536), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/298 (42%), Positives = 173/298 (58%), Gaps = 2/298 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F CA E +   +G+ VI+GIGKSGHIG K+A++LASTGTPSFFVH AEA HG
Sbjct: 25  LLARLDDNFVCACELLLNCRGKAVISGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI  DD+++ +S+SG + EL  IL      +IP+IAIT   +S +A  A  VL +  
Sbjct: 85  DLGMIGADDVVVFISYSGRAKELDLILPLLAENNIPVIAITGGKESPLALAAACVLDISV 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
           E E+CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +
Sbjct: 145 EREACPMGLAPTSSAVNTLMMGDALAMALMRQRGFNAEDFARSHPGGSLGARLLNRVHHL 204

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M +GD +P V     +++A+  LS    G V V D  QK+ G+ T+GD+ R   K  +  
Sbjct: 205 MRTGDRLPQVSENANVMEAMLELSRTGLGLVPVCDAQQKVVGVFTDGDLRRWLVKGHSLQ 264

Query: 284 SVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 I  P   L E      A++ L + +IS   VV+     +G ++  DL + GI
Sbjct: 265 DALGQAITRPGYRLPEQWRAGEALEALHEQHISAAPVVNLDGVLVGAINLHDLHQAGI 322


>gi|308189303|ref|YP_003933433.1| sugar phosphate isomerase [Pantoea vagans C9-1]
 gi|308055918|gb|ADO08087.1| Predicted sugar phosphate isomerase [Pantoea vagans C9-1]
          Length = 320

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/325 (39%), Positives = 188/325 (57%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK   +  A  +I  E R  SSL   L  +    FH A ++I A KG+V+++GIGKSGHI
Sbjct: 1   MKEQVLCAARETIQTELREASSLTERLDDDF---FH-ACQRILACKGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+T+ASTGTP+F+VHAAEA HGDLGMI   D++I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATMASTGTPAFYVHAAEALHGDLGMIAEGDVLILISYSGHAAEFRRMIPLLKALP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD  + +  + E+CP GLAPT+SA+  L +GDALAIA++ + N
Sbjct: 117 VDVIAFTGNPASPLGEAADHCIDVHVKQEACPLGLAPTSSAVNTLIMGDALAIAVMRAHN 176

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE D+   HP G LG   +C   D+M +   IP+V+    + DA+  L+    G VAV 
Sbjct: 177 FSEEDYARTHPAGSLGMRLLCHVKDIMQTDARIPVVEPTSTVYDALFELTRTGLGMVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D  +++ G+ T+GD+ R   K    LS  V+D M  +   +    L   A  LL++  IS
Sbjct: 237 DGDRRMLGVFTDGDLRRWLLKG-GALSSPVQDAMTSSGFALSATQLAAEAKALLQELRIS 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              V+      IG +  LD+   GI
Sbjct: 296 SAPVISQDGYVIGAISSLDISEAGI 320


>gi|158522121|ref|YP_001529991.1| KpsF/GutQ family protein [Desulfococcus oleovorans Hxd3]
 gi|158510947|gb|ABW67914.1| KpsF/GutQ family protein [Desulfococcus oleovorans Hxd3]
          Length = 332

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/318 (37%), Positives = 188/318 (59%), Gaps = 7/318 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A+  +  E +G+  + ++L      QF  AV+ I   KGR+V++GIGKSG +G K+ +
Sbjct: 12  QQAIDVLKNEAKGILEVAANLD----HQFEKAVDLICRSKGRLVVSGIGKSGIVGQKIVA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL STGT + F+H  EA HGDLG++   D+ + LS SG ++EL  ++   R     +IA 
Sbjct: 68  TLNSTGTRALFLHPVEAMHGDLGIVGPKDVFLGLSNSGETEELTGLIPTIRNVGCRVIAF 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  +DIV+ +  + E+CP GLAPTTS    +A+GDALA++L   ++F  +DF
Sbjct: 128 TGNTHSSLARQSDIVINVGVKKEACPLGLAPTTSTTALMAMGDALAVSLSIRKDFKSSDF 187

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  L +  S++M +GD +P V +  P+ +A+ +L  +  G + VV +   L
Sbjct: 188 QRFHPGGSLGRRLALNVSEIMLTGDRVPAVPVKTPIEEALAVLDRQNLGALLVVRKNNTL 247

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+GD+ R +   + L+   V+ +M KNP  +  D+ +  A+ +L QH ++ L V  
Sbjct: 248 AGILTDGDLRRLYLAKEPLSGGPVDSIMTKNPLTVHPDSPVYDALNILEQHQVTALPVTA 307

Query: 322 DCQKAIGIVHFLDLLRFG 339
             +K  GI+H  D+L  G
Sbjct: 308 AGKKVCGILHLHDILGKG 325


>gi|226227027|ref|YP_002761133.1| arabinose 5-phosphate isomerase [Gemmatimonas aurantiaca T-27]
 gi|226090218|dbj|BAH38663.1| arabinose 5-phosphate isomerase [Gemmatimonas aurantiaca T-27]
          Length = 323

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 117/317 (36%), Positives = 189/317 (59%), Gaps = 11/317 (3%)

Query: 29  RSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           R ++A E   L + E++L  E    F  AV+ +   +GRV++ G+GKSG +  K+A+T  
Sbjct: 14  RRVLALEAEALRASETALGDE----FVHAVQLLTECRGRVIVAGVGKSGLVARKMAATFT 69

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ F+H  E+ HGDLG++  DD+ I++S SG SDEL  ++    R  + +IA+T+ 
Sbjct: 70  STGTPAMFLHPVESVHGDLGIVGPDDVAILISKSGESDELLGLIEALARLGVRMIAMTAV 129

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A HAD+ L L  + E+CPH LAPTTS  + +A+GDALA+A+L+ + F   DF   
Sbjct: 130 AGSRLARHADVTLDLLVKEEACPHDLAPTTSTTVTMALGDALAVAVLQQKGFRAEDFARF 189

Query: 208 HPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG LG  L     DVM    ++P +     + +A+ +L+ +R G   VV++G ++ G+
Sbjct: 190 HPGGALGRKLLTRVRDVMEQ-TNLPTLDRQATMREAVVLLAGRR-GIAVVVEQG-RVSGV 246

Query: 267 ITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T GD+ R   +  + LS  V  VM   P++ ++  L +  +  +  H I  + V+D  +
Sbjct: 247 VTAGDLTRLLERQADVLSMPVASVMSATPRLAVDHELGSAVVHRMETHGIMAMPVIDADE 306

Query: 325 KAIGIVHFLDLLRFGII 341
           + +G+VH  DL+R G +
Sbjct: 307 RLVGVVHLHDLMRAGAV 323


>gi|157371810|ref|YP_001479799.1| D-arabinose 5-phosphate isomerase [Serratia proteamaculans 568]
 gi|157323574|gb|ABV42671.1| KpsF/GutQ family protein [Serratia proteamaculans 568]
          Length = 323

 Score =  210 bits (535), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/298 (42%), Positives = 174/298 (58%), Gaps = 2/298 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F CA E +   +G+ VI+GIGKSGHIG K+A++LASTGTPSFFVH AEA HG
Sbjct: 25  LLARLDDNFVCACELLLNCRGKAVISGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI  DD+++ +S+SG + EL  IL      +IP+IAIT   +S +A  A  +L +  
Sbjct: 85  DLGMIGADDVVVFISYSGRAKELDLILPLLAENNIPVIAITGGKESPLAQAAACMLDISV 144

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
           E E+CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +
Sbjct: 145 EREACPMGLAPTSSAVNTLMMGDALAMALMRQRGFNAEDFARSHPGGSLGARLLNRVHHL 204

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M +GD +P V     +++A+  LS    G V V D  QK+ G+ T+GD+ R   K  +  
Sbjct: 205 MRTGDRLPQVSESANVMEAMLELSRTGLGLVPVCDAQQKVVGVFTDGDLRRWLVKGNSLQ 264

Query: 284 SVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 I  P   L E +    A++ L + +IS   VV+     +G ++  DL + GI
Sbjct: 265 DALSPAITRPGYRLPEQSRAGEALEALHEQHISAAPVVNLEGVLVGAINLHDLHQAGI 322


>gi|304382235|ref|ZP_07364742.1| arabinose 5-phosphate isomerase [Prevotella marshii DSM 16973]
 gi|304336592|gb|EFM02821.1| arabinose 5-phosphate isomerase [Prevotella marshii DSM 16973]
          Length = 324

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/286 (39%), Positives = 179/286 (62%), Gaps = 7/286 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV  + A KG++++TG+GKSG+IG+K+A+TLASTGTP+FF++  +  HGDLG++T 
Sbjct: 37  NFAAAVAMMYACKGKIIVTGVGKSGNIGAKIAATLASTGTPAFFINPLDVYHGDLGVMTS 96

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++ LS SG +DEL   L      ++P+IA+++   S++A ++ I L +    E+CP 
Sbjct: 97  DDVVLALSNSGQTDELLRFLPMVLHMNVPIIAMSANPASLLAKYSTIHLKVKVNKEACPL 156

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAPT+S    L +GDALA+AL+  R+F   DF   HPGG+LG  L   A DVM + D++
Sbjct: 157 NLAPTSSTTAALTMGDALAVALMRVRDFKPRDFAQFHPGGELGKRLLTTAGDVMRT-DNL 215

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVED 287
           P++    PL +AI  +S  + G    +D G K+ G+IT+GDI R   K   +    +V D
Sbjct: 216 PVIPQSMPLGEAIIEVSRGKLGLGVSLD-GDKVAGLITDGDIRRAMEKWQAEFFNKTVSD 274

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
           +M + PK +L  T ++   +++  + I  ++VVD   +  G+V H+
Sbjct: 275 IMTRTPKTVLPTTKISEIQRIMNDNKIHTVLVVDANGRLKGVVDHY 320


>gi|260655089|ref|ZP_05860577.1| arabinose 5-phosphate isomerase [Jonquetella anthropi E3_33 E1]
 gi|260630200|gb|EEX48394.1| arabinose 5-phosphate isomerase [Jonquetella anthropi E3_33 E1]
          Length = 337

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/292 (41%), Positives = 180/292 (61%), Gaps = 11/292 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A   +   +GR+V++G+GKSGH+G K+++TLAS GTPSFFVHAAEA+HGDLGM+ ++D  
Sbjct: 49  AARLVAGCRGRLVVSGMGKSGHVGRKISATLASLGTPSFFVHAAEAAHGDLGMVRQEDAA 108

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +++S SG + E+ ++  + +R   P+IAIT +  S +A  +D+VL      E+ P  LAP
Sbjct: 109 LLISHSGKTAEVVSLAPFFKRLGAPVIAITGDLSSPLAAASDLVLDASVLREADPLNLAP 168

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT---LFVCASDVMHSGDSIPL 232
           T+S  +QLAIGDAL+  +   R+    DF + HP G LG    L VC  DVM +GD +PL
Sbjct: 169 TSSTTLQLAIGDALSSMVTVLRDLKREDFALFHPAGSLGKQLLLRVC--DVMGTGDRLPL 226

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTLSVEDV 288
           V+    +  +I  ++ K +G   VVD+  +L GI T+GD+ R   K     LN L V  V
Sbjct: 227 VRAETTVQSSIFEMTSKGYGATIVVDDQGRLLGIFTDGDLRRLLTKSGIEALN-LPVSQV 285

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M  +P  I  D L   A++L+ Q  +SVL +V   +  +GI+H  +LL+ G+
Sbjct: 286 MTHSPLTISGDQLAVQAVRLMEQKEVSVL-IVTRGEFPVGIIHLHELLQSGV 336


>gi|313205606|ref|YP_004044783.1| kpsf/gutq family protein [Riemerella anatipestifer DSM 15868]
 gi|312444922|gb|ADQ81277.1| KpsF/GutQ family protein [Riemerella anatipestifer DSM 15868]
          Length = 319

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 121/299 (40%), Positives = 180/299 (60%), Gaps = 5/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+  L+  F  AVE I    G++++ GIGKS H+G+K+ +TL STGTP+ F+HAAEA HG
Sbjct: 24  LRDNLNNSFLDAVELINKSSGKLIVVGIGKSAHVGNKIVATLNSTGTPAQFLHAAEAIHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++ ++D+++ +S SG+S E+  +  Y +++S  LI +T   KS +A H+DIVL    
Sbjct: 84  DLGVVQKNDVVLCISNSGNSPEIVNLAPYLKQYSSGLIGMTGNLKSKLAEHSDIVLNTFV 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           E E+CP+ LAPT+S  +Q+A+GDALA+ L+E  +F + DF   HPGG LG          
Sbjct: 144 EKEACPNKLAPTSSTTVQMALGDALAVCLMEINHFKDTDFAKFHPGGSLGKNLTAKVGQF 203

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT 282
            S    P V     + + I  +S    G V VV EG  +KGIIT+GD+ R    + D+  
Sbjct: 204 LSSQK-PQVSEEASIKEVIISISASTHG-VTVVTEGDAIKGIITDGDLRRMLMSNDDIKE 261

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +  +D+M   PK I ++ L   AM++L+Q+NI  L+V D      GI+    LL  GI+
Sbjct: 262 IKAKDIMSLTPKTIDKEALAKEAMKILKQYNIGQLIVTDKGN-YFGIIDLHTLLDEGIL 319


>gi|152971565|ref|YP_001336674.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896162|ref|YP_002920898.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330007953|ref|ZP_08306125.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
 gi|150956414|gb|ABR78444.1| putative polysialic acid capsule expression protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238548480|dbj|BAH64831.1| putative polysialic acid capsule expression protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328535274|gb|EGF61764.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
          Length = 321

 Score =  210 bits (534), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 177/302 (58%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A E I   +G+++++GIGKSGHIG KLA+T ASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFIRAAETIIHCEGKLIVSGIGKSGHIGKKLAATFASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D+++ +S+SGS+ EL  I+       IPL+A+T ++ S +A  A  VL +
Sbjct: 81  HGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKGIPLLAMTGKSTSPLALAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 AVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
            +M   + +P V     ++DA+  LS    G VAV DE  +++G+ T+GD+ R       
Sbjct: 201 HLMRRDEEVPRVNTEANVMDAMLELSRTGLGLVAVCDEANRVQGVFTDGDLRRWLVAGGT 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           LN   V   M +N   +  D+    A + L +H IS   VVD+  + +G ++  +  + G
Sbjct: 261 LND-GVTRAMTRNGVTLQADSRAVEAKERLMKHKISAAPVVDENGQLVGAINLQNFYQAG 319

Query: 340 II 341
           I+
Sbjct: 320 IL 321


>gi|282877371|ref|ZP_06286194.1| putative arabinose 5-phosphate isomerase [Prevotella buccalis ATCC
           35310]
 gi|281300423|gb|EFA92769.1| putative arabinose 5-phosphate isomerase [Prevotella buccalis ATCC
           35310]
          Length = 324

 Score =  209 bits (533), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 184/290 (63%), Gaps = 7/290 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AV+ +   KG++++TG+GKSG++G+K+A+TL+STGTP+F+++  +  HGDLG
Sbjct: 33  QLDENFEKAVDMMFNCKGKIIVTGVGKSGNVGAKIAATLSSTGTPAFYINPLDIYHGDLG 92

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   L      ++P+++I+   KS++A ++   +T   E E
Sbjct: 93  VMTPDDVVLALSNSGQTDELLRFLPMVLHMNVPVVSISGNPKSLLAKYSTAHITCRVEKE 152

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALAIAL+  RNF  NDF   HPGG+LG  L   ASDVM S
Sbjct: 153 ACPLNLAPTSSTTAALAMGDALAIALMMVRNFKPNDFAQFHPGGELGKRLLTTASDVMRS 212

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
            D++P++     L DAI  +S+ + G + V  E +K+ G+IT+GDI R   K        
Sbjct: 213 -DNLPIIPKEMHLGDAIIHVSKGKLG-LGVSLENEKVVGLITDGDIRRAMEKWQAQFFDK 270

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
           +V D+M  +PK +  +T +T    ++ ++ I  ++VVD     +G+V H+
Sbjct: 271 TVSDIMTTSPKTVSPNTKITEIQTIMHKYKIHTVLVVDSDNHLLGVVDHY 320


>gi|315608345|ref|ZP_07883334.1| arabinose 5-phosphate isomerase [Prevotella buccae ATCC 33574]
 gi|315249975|gb|EFU29975.1| arabinose 5-phosphate isomerase [Prevotella buccae ATCC 33574]
          Length = 323

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 183/287 (63%), Gaps = 6/287 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           ++   F  AVE +    G++++TG+GKSG+IG+K+A+TLASTGTP+FF++  +  HGDLG
Sbjct: 32  QMDENFSKAVEMMYRCHGKIIVTGVGKSGNIGAKIAATLASTGTPAFFINPLDVYHGDLG 91

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   +      ++P+I++T   KS++A  ++  L +  + E
Sbjct: 92  VMTSDDVVLALSNSGQTDELLRFIPMLLHMNVPIISMTGNEKSLLAKFSNAHLKVWVKKE 151

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALA+AL++ R+F   DF   HPGG+LG  L   A DVM S
Sbjct: 152 ACPLNLAPTSSTTAALAMGDALAVALMQVRDFKPRDFAQFHPGGELGKRLLTTAEDVMRS 211

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--- 283
            D +P++     L +AI  +S+ + G + V  E  K+ G+IT+GDI R   K        
Sbjct: 212 -DQLPIIPQDMHLGEAIIQVSKGKLG-LGVSLEDNKVAGLITDGDIRRAMEKWQAKFFDH 269

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V+++M + PK++L +T +T   ++++QH I  ++V D  +  +G+V
Sbjct: 270 TVDEIMTRTPKLVLPNTKITEIQRIMQQHRIHTVLVTDKERHLLGVV 316


>gi|282859566|ref|ZP_06268671.1| putative arabinose 5-phosphate isomerase [Prevotella bivia
           JCVIHMP010]
 gi|282587794|gb|EFB92994.1| putative arabinose 5-phosphate isomerase [Prevotella bivia
           JCVIHMP010]
          Length = 324

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/294 (39%), Positives = 183/294 (62%), Gaps = 6/294 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AVE I   KG+V++TG+GKSG+IG+K+A+TL+STGTP+FFV+  +A H
Sbjct: 28  ALIDQLDENFDKAVELIYHCKGKVIVTGVGKSGNIGAKIAATLSSTGTPAFFVNPLDAYH 87

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++T++D+++ LS SG +DEL   +       IP+I +++   S++A ++ + + + 
Sbjct: 88  GDLGVMTKEDIVLALSNSGQTDELLRFVPILLHMDIPIIGMSANTSSLLAKYSTVHIKVW 147

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP  LAPT+S    L +GDALA+AL+  RNF   DF   HPGG LG  L   A D
Sbjct: 148 VEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPKDFAQFHPGGSLGKRLLTTAQD 207

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           VM + + +P++     L +AI  +S+ + G    +D   ++ G+IT+GDI R   K    
Sbjct: 208 VMQA-EELPIIPKEMNLGEAIIHVSKGKLGLGVSLDTDNRVIGLITDGDIRRAMEKWQAK 266

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
               +VED+M K PK +L  T ++     ++++ I  ++V DD ++ +GIV H+
Sbjct: 267 FFDKTVEDIMTKQPKSVLPTTKISDIQATMQKYKIHTVLVCDDQKQLLGIVDHY 320


>gi|300777719|ref|ZP_07087577.1| arabinose-5-phosphate isomerase [Chryseobacterium gleum ATCC 35910]
 gi|300503229|gb|EFK34369.1| arabinose-5-phosphate isomerase [Chryseobacterium gleum ATCC 35910]
          Length = 319

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/305 (39%), Positives = 186/305 (60%), Gaps = 6/305 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE  L+  +  QF  AVE I +  G++++ GIGKS H+G+K+ +TL STGTPS F+H
Sbjct: 18  ISELEK-LKNRIDDQFARAVEIIHSANGKLIVVGIGKSAHVGNKIVATLNSTGTPSQFLH 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+EA HGDLG+I + D+++ +S SG+S E+  ++ Y + +S  LI +T    S +A  ++
Sbjct: 77  ASEAIHGDLGVIQKQDVVLCISNSGNSPEIANLVPYLKDYSSALIGMTGNKTSKLAEFSE 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           ++L    + E+CP+ LAPT+S  +Q+A+GDALA+AL+E  +F  NDF   HPGG LG   
Sbjct: 137 VILDTHVDIEACPNKLAPTSSTTIQMALGDALAVALMELNDFKANDFAKFHPGGSLGKNL 196

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               +   S    P V    P+ D I  +S    G   V +E Q + G+IT+GD+ R   
Sbjct: 197 TSKVEQFLSSQK-PQVTEDSPIRDVIISISASSHGITVVTNEDQ-IIGVITDGDLRRMLM 254

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K  D++ +  +D+M  +P+ I +D L   AM++L+++NI  L+V ++  K  GI+    L
Sbjct: 255 KGEDISKVLAKDIMSAHPRTIEKDALAKEAMKILKENNIGQLVVTENG-KYFGIIDLHKL 313

Query: 336 LRFGI 340
           L  GI
Sbjct: 314 LDEGI 318


>gi|288926072|ref|ZP_06420000.1| arabinose 5-phosphate isomerase [Prevotella buccae D17]
 gi|288337112|gb|EFC75470.1| arabinose 5-phosphate isomerase [Prevotella buccae D17]
          Length = 323

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 112/287 (39%), Positives = 183/287 (63%), Gaps = 6/287 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           ++   F  AVE +    G++++TG+GKSG+IG+K+A+TLASTGTP+FF++  +  HGDLG
Sbjct: 32  QMDENFSKAVEMMYRCHGKIIVTGVGKSGNIGAKIAATLASTGTPAFFINPLDVYHGDLG 91

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   +      ++P+I++T   KS++A  ++  L +  + E
Sbjct: 92  VMTSDDVVLALSNSGQTDELLRFIPMLLHMNVPIISMTGNEKSLLAKFSNAHLKVWVKKE 151

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALA+AL++ R+F   DF   HPGG+LG  L   A DVM S
Sbjct: 152 ACPLNLAPTSSTTAALAMGDALAVALMQVRDFKPRDFAQFHPGGELGKRLLTTAEDVMRS 211

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--- 283
            D +P++     L +AI  +S+ + G + V  E  K+ G+IT+GDI R   K        
Sbjct: 212 -DQLPIIPQDMHLGEAIIQVSKGKLG-LGVSLEDDKVAGLITDGDIRRAMEKWQAKFFDH 269

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V+++M + PK++L +T +T   ++++QH I  ++V D  +  +G+V
Sbjct: 270 TVDEIMTRTPKLVLPNTKITEIQRIMQQHRIHTVLVTDKERHLLGVV 316


>gi|258544359|ref|ZP_05704593.1| arabinose 5-phosphate isomerase [Cardiobacterium hominis ATCC
           15826]
 gi|258520439|gb|EEV89298.1| arabinose 5-phosphate isomerase [Cardiobacterium hominis ATCC
           15826]
          Length = 321

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 180/295 (61%), Gaps = 5/295 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A E + A +G V++TG+GKSGHIG K+A+TLASTGTP+FFVHAAEA HGDLGM
Sbjct: 28  LGAPFLAACELLLATRGHVIVTGLGKSGHIGEKIAATLASTGTPAFFVHAAEAGHGDLGM 87

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           IT DD I+ +S+SG S E+  +L   R   +  IA+T   +S +A  AD+ L +    E+
Sbjct: 88  ITADDTILAISYSGESQEILMMLPIVRALGVKTIALTGRPQSSMAQQADLHLPVVVAKEA 147

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP GLAPTTS    LA+GDALAI L+++R F+E DF   HP G+LG  L     DVM   
Sbjct: 148 CPLGLAPTTSTTATLALGDALAITLMQARQFNEQDFARSHPYGRLGRRLMTKVGDVMRRD 207

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--V 285
            ++P V     +  A+  +++K  G V +V +G +L GI T+GD+ R   K  + L   +
Sbjct: 208 AAVPQVARDASVQTALFQITDKGLG-VTLVSDGDRLLGIFTDGDLRRALEKYPDALQRPI 266

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +VM + P+      L   A+Q +   +I+ L V+ D ++  GI+H  DLLR G+
Sbjct: 267 AEVMTRAPQTTAPTVLAAEALQHMEARHITALPVL-DGERIAGIIHIHDLLRAGV 320


>gi|228473727|ref|ZP_04058474.1| arabinose 5-phosphate isomerase [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274839|gb|EEK13657.1| arabinose 5-phosphate isomerase [Capnocytophaga gingivalis ATCC
           33624]
          Length = 321

 Score =  209 bits (533), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 189/324 (58%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +  A  +I  E   L  L + L  +    F  +V+ I    GRVV+TGIGKS  I  
Sbjct: 5   NKILDFARETIETELYSLGKLTNFLDKD----FALSVQTILESGGRVVVTGIGKSAIIAQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ STGTPS F+HAA+A HGDLGMI   D+II +S SG++ E+K ++   +R   P
Sbjct: 61  KIVATMNSTGTPSLFMHAADAIHGDLGMIQPKDVIICISKSGNTPEIKVLVPLLKREGNP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT+  +S +A  A+ VL    + E+CP+ LAPTTS   QL +GDAL++AL+  ++F 
Sbjct: 121 LIAITANRESFLATQANYVLYAYTQKEACPNNLAPTTSTTAQLVMGDALSVALMRMKSFG 180

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L++   + + + + +P V     +   I  +S+K  G  AV+ E
Sbjct: 181 SEDFAKYHPGGALGKRLYLTVGEAI-ARNQVPSVAPDTDIRQVIVEISQKMLGVTAVL-E 238

Query: 260 GQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G  + G+IT+GDI R    ++D+  L  +D+M  +PK I    L   A+  ++ H I+ L
Sbjct: 239 GDAIVGVITDGDIRRMLSRYEDIKGLKAKDIMSSHPKTIESSVLAVDALDFMQNHKITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V     + +G++H  +L++ GII
Sbjct: 299 LVT-HSSRYMGVIHLHNLIQEGII 321


>gi|297182780|gb|ADI18934.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured SAR11 cluster bacterium HF0010_09O16]
          Length = 323

 Score =  209 bits (532), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 118/304 (38%), Positives = 189/304 (62%), Gaps = 9/304 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L+  ++  F+ AV +I   + +V++ G+GKSG I +K+ASTL+S GTPSF++ A++ S
Sbjct: 22  TKLKNNINDSFNLAVNQILKCQSKVILCGVGKSGLIANKIASTLSSVGTPSFYLSASDCS 81

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGD+G +++ D++I++S SG ++ELK I+ +A R  I LI I S+  SV+   ADI L +
Sbjct: 82  HGDMGGLSKKDILILISNSGETNELKNIIQFANRNKILLIGIVSQKNSVLYRSADIKLLI 141

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           PK  E+    + PT+S   QLA+GDALAIA ++ R F++ DF  +HP G LG       D
Sbjct: 142 PKATEA--GNIIPTSSTTSQLALGDALAIATMKHRKFNKKDFKKIHPAGSLGAQLKTVED 199

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK--GIITEGDI--FRNFHK 278
           +M    +IP V     L DA+ +LS K+ G + V D+ +KL   G+I++GDI  F   ++
Sbjct: 200 IMLKDKAIPFVNENLKLKDALKVLSSKKLGFLLVRDK-KKLTTLGLISDGDIRRFSQKNQ 258

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +L+ +SV+++M KNP  I +D L    + L+    I+ L V +     K IG++H  ++L
Sbjct: 259 NLHNISVKEIMTKNPIGIDKDELAAKGLSLMADKKITSLCVYNKKNKLKTIGVLHIHNIL 318

Query: 337 RFGI 340
           +  I
Sbjct: 319 QSNI 322


>gi|315930952|gb|EFV09927.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 315

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/292 (40%), Positives = 175/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +A   DI L +  
Sbjct: 81  DLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLAKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKIRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D I +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLIDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  + VV    K +GI+  
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKENKVVGIIQL 309


>gi|194291851|ref|YP_002007758.1| polysialic acid capsule expression protein, arabinose-5-phosphate
           isomerase [Cupriavidus taiwanensis LMG 19424]
 gi|193225755|emb|CAQ71701.1| polysialic acid capsule expression protein, putative
           Arabinose-5-phosphate isomerase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 320

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/315 (38%), Positives = 179/315 (56%), Gaps = 9/315 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHC----AVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  +IA  R + + E      +S +F      AVE I   +GRVV+ G+GKSG IG K+A
Sbjct: 1   MTEVIALARNVVATEIQALDRMSSRFDAGFEKAVEIILQARGRVVVVGMGKSGLIGKKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FFVH  EA HGDLGMI   D+++++S SG ++EL  IL +      P IA
Sbjct: 61  ATMASTGTPAFFVHPGEAFHGDLGMIKPIDVVLMISNSGETEELIRILPFLEHQENPAIA 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T   +S +A HAD+VL +  + E+C + LAPT+S    L +GDALA+ L   R+F   D
Sbjct: 121 MTGNVRSTLARHADVVLDISVQREACNNNLAPTSSTTATLVMGDALAVVLAVKRDFQPAD 180

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L    +DVMH  D++P+ +      D + +++  R G   V+D G++
Sbjct: 181 FARFHPGGSLGRKLLTRVADVMHK-DNLPVCRPDASFRDVVHVINRGRLGMALVMD-GEQ 238

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L+G+IT+GD+ R F   +D   +    +M   PK +        A   +    I  L+V 
Sbjct: 239 LQGVITDGDVRRAFDSDRDYKAIMARHIMSNAPKTVSPGERFADAEARIHAARIGALVVK 298

Query: 321 DDCQKAIGIVHFLDL 335
           D+  K +GI+   DL
Sbjct: 299 DEAGKVVGILQIHDL 313


>gi|291616385|ref|YP_003519127.1| GutQ [Pantoea ananatis LMG 20103]
 gi|291151415|gb|ADD75999.1| GutQ [Pantoea ananatis LMG 20103]
          Length = 325

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/285 (42%), Positives = 168/285 (58%), Gaps = 2/285 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A E I   +G+ +++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLGMIT  
Sbjct: 39  FINACELILQCQGKTIVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLGMITSQ 98

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+ I +S SGS+ EL+ I+   +  ++P+IAIT+   S +A  A+ VL L    E+CP G
Sbjct: 99  DVFIFISNSGSAAELQIIVPALKALNVPIIAITNVAHSFLAQQANHVLHLAVNREACPMG 158

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           LAPT+SA+  L +GDALA+AL+ SRNF+E  F   HPGG LG  L    +  M  G+ IP
Sbjct: 159 LAPTSSAVNTLLLGDALAMALMRSRNFNEEQFARSHPGGSLGVGLLNSVAQCMRKGERIP 218

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     ++DA+  L+    G V   D+   ++GI T+GD+ R            D ++ 
Sbjct: 219 RVNKNASVLDAMEELTRTGMGIVIACDDDNAIEGIFTDGDLRRALLAGKKLDDRLDPLLT 278

Query: 292 NPKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            P   L + L +  A Q L    IS   VV+   + +G ++  DL
Sbjct: 279 RPGYKLAEHLSVAAATQKLYDRRISAAPVVNQQGQLVGAINLYDL 323


>gi|297521537|ref|ZP_06939923.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 256

 Score =  209 bits (532), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 112/248 (45%), Positives = 159/248 (64%), Gaps = 6/248 (2%)

Query: 25  QCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q A + ++A E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A
Sbjct: 13  QQAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMA 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI 
Sbjct: 69  ATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLIC 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  D
Sbjct: 129 ITGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAED 188

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   
Sbjct: 189 FALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMM 248

Query: 263 LKGIITEG 270
           ++GI T+G
Sbjct: 249 IEGIFTDG 256


>gi|332705753|ref|ZP_08425829.1| KpsF/GutQ family protein [Lyngbya majuscula 3L]
 gi|332355545|gb|EGJ35009.1| KpsF/GutQ family protein [Lyngbya majuscula 3L]
          Length = 327

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 117/297 (39%), Positives = 179/297 (60%), Gaps = 7/297 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   AVE +   +G+VV+ G+GKSG +G K+A+TL STGT + ++H  +A HGDLG +T 
Sbjct: 31  EVEQAVELLANCRGKVVLVGVGKSGIVGRKIAATLTSTGTLATYLHPGDAMHGDLGSVTS 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ LS SG +DEL A++ Y +R  +P+IAI     S +A +AD+VL    + E CP 
Sbjct: 91  SDVVVTLSNSGETDELVAVMPYLKRRQLPIIAIVGNLNSTLARNADVVLDASVDQEVCPF 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAPTTS  + LAIGDALA+ L+  +  +  DF + HP G+LG  L +  +D+MH     
Sbjct: 151 NLAPTTSTTVALAIGDALAMTLMPLKGLTPEDFALNHPAGRLGKRLTLRVADLMHKDQDN 210

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVE 286
           P++      I+ +  +++   G V VVD+  +L GIIT+GD+ R+  K    +L  L   
Sbjct: 211 PVISPQASWIEIVGAITKGSLGAVNVVDDKGELFGIITDGDLRRSIAKIKPTELEHLKAV 270

Query: 287 DVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +M  NP ++  D L   A+QL+  R   ISVL VVD  ++ IG++   D+ + GI+
Sbjct: 271 AIMTPNPVMVQPDQLAYDALQLMENRTSQISVLPVVDKHKRCIGLLRLHDIAQSGIL 327


>gi|238792128|ref|ZP_04635764.1| hypothetical protein yinte0001_10340 [Yersinia intermedia ATCC
           29909]
 gi|238728759|gb|EEQ20277.1| hypothetical protein yinte0001_10340 [Yersinia intermedia ATCC
           29909]
          Length = 299

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 4   RLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVVIFISYSGRAKELDLILPLLADSKIPVIAITGGKESPLALGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F   DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFGAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GDS+P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDSLPMVHESDSVMEAMLELSRTGLGLVAVCDPEQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH++S   VV+   K +G ++  DL + G+
Sbjct: 244 GSAITRPGYRLPEQWRAGEALEALHQHHLSAAPVVNLDGKLVGAINLHDLHQAGV 298


>gi|218781285|ref|YP_002432603.1| KpsF/GutQ family protein [Desulfatibacillum alkenivorans AK-01]
 gi|218762669|gb|ACL05135.1| KpsF/GutQ family protein [Desulfatibacillum alkenivorans AK-01]
          Length = 327

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 184/324 (56%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  +T++ A   +  E  G+  L      ++   F   V+ I   KGRV++ GIGKSG +
Sbjct: 1   MGQTTIEQAKEVLKIEAEGVLELVE----KIDEGFSAMVDLIMDCKGRVIVGGIGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +TL STGT S F+H  EA HGDLGM+  DD+ + LS SG +DEL  ++   ++  
Sbjct: 57  GRKIVATLNSTGTRSMFLHPVEAMHGDLGMVCSDDIFLALSNSGETDELNILVPSIQKAG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA T    S +A ++DIV+ +  + E+CP GLAPT+S    LAIGDALA+ L+  RN
Sbjct: 117 CKVIAFTGNVNSTLAKYSDIVIDVGVKREACPLGLAPTSSTTALLAIGDALAVVLINKRN 176

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F  +DF   HPGG LG  L     D+M +GD +P V     + +AI  +     G   V 
Sbjct: 177 FKSSDFKRFHPGGHLGQRLSAKIKDIMLTGDDVPCVLEDTIMTEAIAEMDRLDLGTTLVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+   LKGIIT+GD+ R   +   ++  + +DVM   PK +   + ++ A+ L+  H I+
Sbjct: 237 DKDGALKGIITDGDLRRFLTRGNGVDRKTAKDVMTPTPKAVTSHSKVSEALNLMEAHLIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFG 339
           VL VV +  + +GI+H  D+L  G
Sbjct: 297 VLPVVGEKNQVLGILHVHDILGKG 320


>gi|113476650|ref|YP_722711.1| KpsF/GutQ family protein [Trichodesmium erythraeum IMS101]
 gi|110167698|gb|ABG52238.1| KpsF/GutQ family protein [Trichodesmium erythraeum IMS101]
          Length = 324

 Score =  209 bits (531), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 115/315 (36%), Positives = 188/315 (59%), Gaps = 5/315 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ + +++  L+S+I ++  +S++ S L   +   +  AV +++  KG++V++GIGKSG 
Sbjct: 1   MLTHKSIKQQLKSVIEQE--ISAI-SKLCESIDDSWLKAVLRLRDCKGKLVVSGIGKSGS 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A++  STG P+ F+H  EASHGDLG++   D+++VLS SG + EL  I+ YA R 
Sbjct: 58  ISQKIAASFTSTGIPAIFIHPTEASHGDLGLLDSSDILLVLSASGQTSELLDIMQYASRL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I IT    S +A  ADI+L +P  PE+C +GLAPT S   QL +GDAL + L+  R
Sbjct: 118 KSSIILITKNPNSSLAHFADIILQIPDLPEACINGLAPTISTTCQLVLGDALVVTLMSLR 177

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+  DF   HPGG LG L V   ++M+    IPL+ +G  + +AI  ++ K  GCV V+
Sbjct: 178 GFTSEDFKQFHPGGNLGALLVPVKNLMYKEHQIPLIDLGASIKEAIIEMNFKSLGCVGVI 237

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   +  GI T+GD+ R+    ++    V   M  +P  I  D +++  +   +++ I  
Sbjct: 238 NHRNQYVGIFTDGDLRRSLEAKVSLEEPVSQHMTPSPLSIQSDLIISELIDFFQKNQIPN 297

Query: 317 LMVVDDCQKAIGIVH 331
           + VV++  + IGIVH
Sbjct: 298 VFVVEN-NEPIGIVH 311


>gi|262037736|ref|ZP_06011178.1| arabinose 5-phosphate isomerase [Leptotrichia goodfellowii F0264]
 gi|261748208|gb|EEY35605.1| arabinose 5-phosphate isomerase [Leptotrichia goodfellowii F0264]
          Length = 325

 Score =  208 bits (530), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 124/308 (40%), Positives = 191/308 (62%), Gaps = 11/308 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGR-VVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           +S LE  ++  ++  F   V  I  ++ R VV+TGIGKSG IG K+A+TLASTGT + F+
Sbjct: 17  ISELER-VKNRINENFEKLVYMINGLEHRKVVVTGIGKSGIIGKKIAATLASTGTSAIFI 75

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           +AAEA HGDLGMI+  D++I +S SG+SDE+ +I+   ++    ++A T    S +A HA
Sbjct: 76  NAAEALHGDLGMISEGDIVIAISNSGNSDEILSIMTPIKKIGAEIVAFTGNETSPLAKHA 135

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT- 215
            +V+ +  E E+   G AP +S    L +GDALA  L++ RNF+ENDF   HPGG LG  
Sbjct: 136 KVVINIGVEKEASNLGTAPMSSTTATLVMGDALASVLMKMRNFTENDFAKYHPGGSLGKR 195

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDI 272
           L +  SD+MHSG+ +P++     + + + +L++K+ G V + + G+   KL GIITEGDI
Sbjct: 196 LLLTVSDLMHSGEELPVLAADENIENVLLVLTKKKMGAVCISETGKENGKLIGIITEGDI 255

Query: 273 FRNF-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIG 328
            R   HK +  +   +D+MI  P  I  + +   A++L+  R+  I+VL VV++    +G
Sbjct: 256 RRALVHKEEFFSYKAKDIMISTPVSIGRNAMAMEALKLMENRKSQINVLPVVENGN-VVG 314

Query: 329 IVHFLDLL 336
           I+   DL+
Sbjct: 315 IIRVHDLI 322


>gi|305432235|ref|ZP_07401398.1| arabinose-5-phosphate isomerase [Campylobacter coli JV20]
 gi|304444583|gb|EFM37233.1| arabinose-5-phosphate isomerase [Campylobacter coli JV20]
          Length = 317

 Score =  208 bits (530), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/318 (38%), Positives = 186/318 (58%), Gaps = 11/318 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK  T++ A      E + +  L  +L       F  A+E +   KGR +++G+GKSGHI
Sbjct: 1   MKIDTLKIAKEVFATEAKAIEDLALNLDE----NFSKAIELMLHTKGRCIVSGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTPSFF+H  EA HGDLGM+T DD++I +S SG ++E+  I+   ++  
Sbjct: 57  GAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDVLIAISNSGETEEILKIIPAIKKRK 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLIA+  +  S +    D+ L +  + E+CP  LAP +S    L +GDALA AL+++RN
Sbjct: 117 IPLIAMCGKKNSTLVKQGDVFLNISVKEEACPLQLAPMSSTTATLVMGDALAAALMKARN 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F  +DF + HPGG LG  L    SD+M S  ++P+V       D + +++  + G   VV
Sbjct: 177 FRPDDFALFHPGGSLGRKLLTRVSDLMVS-KNLPIVHPDTEFNDLVDVMTSGKLGLCLVV 235

Query: 258 DEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E +KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I
Sbjct: 236 -ENEKLVGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDADAMASEAEEIMLKYKI 294

Query: 315 SVLMVVDDCQKAIGIVHF 332
             + VV    K +GI+  
Sbjct: 295 KEI-VVSKEDKVVGIIQL 311


>gi|332162615|ref|YP_004299192.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666845|gb|ADZ43489.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 321

 Score =  208 bits (530), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 26  RLDNNFVHACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 85

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 86  MIGSQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGLESPLAQGAACVLDISVEHE 145

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG   +     +M +
Sbjct: 146 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLINRVHHLMRT 205

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VA+ D  QK+ G+ T+GD+ R   K        
Sbjct: 206 GDRLPVVNESDSVMEAMLELSRTGLGLVAICDPNQKVVGVFTDGDLRRWLVKGGTLQQQL 265

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VVD   K +G ++  DL + G+
Sbjct: 266 GGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLDGKLVGAINLHDLHQAGV 320


>gi|224369312|ref|YP_002603476.1| KdsD [Desulfobacterium autotrophicum HRM2]
 gi|223692029|gb|ACN15312.1| KdsD [Desulfobacterium autotrophicum HRM2]
          Length = 325

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/299 (39%), Positives = 175/299 (58%), Gaps = 4/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  ++  +F   V+ I + KGRV+I+GIGKSG IG K+ +TL STGT + F+H  EA HG
Sbjct: 20  LTKKIGPEFEQMVKTILSSKGRVIISGIGKSGLIGKKIVATLTSTGTNAMFLHPVEAMHG 79

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+ I +S SG + EL  +L   +     +IA T    S +A   D+V+    
Sbjct: 80  DLGMVIEQDVFIAISNSGETGELNVLLPSIKALGCAMIAFTGNPGSTMAKLCDMVIDTGV 139

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
           E E+CP GLAPT S   QLA+GDALA+ L++ +NF E+DF   HPGG LG    C   ++
Sbjct: 140 EKEACPLGLAPTCSTTAQLAMGDALAVVLIKKKNFKESDFKRSHPGGVLGQRLSCMVKEI 199

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
           M+  D  P+V  G  +  AI ++ + + G V + D    L GIIT+GDI  +  +   D 
Sbjct: 200 MNHDDPPPVVARGTTITFAIGVMEQFKLGAVLITDTDNTLLGIITDGDIRHSIARGQFDF 259

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + + VEDVM  +P  I  ++ L  A+ ++ ++ I+ L V D+ +K  GI+H  ++L  G
Sbjct: 260 DHIVVEDVMSCDPFTIRPNSPLYDALNIMEKNEITALPVTDNSKKLCGILHLHEILGKG 318


>gi|262043959|ref|ZP_06017043.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038685|gb|EEW39872.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 321

 Score =  208 bits (530), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 119/302 (39%), Positives = 177/302 (58%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A E I   +G+++++GIGKSGHIG KLA+T ASTGTP+FFVH AEA 
Sbjct: 21  SRLPKRLGDDFIRAAETIIHCEGKLIVSGIGKSGHIGKKLAATFASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D+++ +S+SGS+ EL  I+       IPL+A+T ++ S +A  A  VL +
Sbjct: 81  HGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKGIPLLAMTGKSTSPLALAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 AVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
            +M   + +P V     ++DA+  LS    G VAV D+  +++G+ T+GD+ R       
Sbjct: 201 HLMRRDEEVPRVNTEANVMDAMLELSRTGLGLVAVCDKANRVQGVFTDGDLRRWLVAGGT 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           LN   V   M +N   +  D+    A + L +H IS   VVD+  + +G ++  +  + G
Sbjct: 261 LND-GVTRAMTRNGVTLQADSRAVEAKERLMKHKISAAPVVDENGQLVGAINLQNFYQAG 319

Query: 340 II 341
           I+
Sbjct: 320 IL 321


>gi|94270807|ref|ZP_01291829.1| KpsF/GutQ [delta proteobacterium MLMS-1]
 gi|93450655|gb|EAT01755.1| KpsF/GutQ [delta proteobacterium MLMS-1]
          Length = 328

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 174/293 (59%), Gaps = 6/293 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AVE I A   R++++GIGKSG IG K+A+T+ STGTP+ F+H  EA HGDLG++   
Sbjct: 30  FERAVELIMACPTRLIVSGIGKSGIIGQKIAATMNSTGTPALFLHPVEAMHGDLGIVDPR 89

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ +S+SG + EL  +L   +     +IA+T    S +A  AD VL +    E+CP G
Sbjct: 90  DVVLAISYSGETAELNLLLPTLKSRGARIIAMTGRPDSGLAAAADAVLNVAVPCEACPLG 149

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           LAPT S    LA+GDALA+ LL  +NF+  DF   HPGG LG  L +  S+VM +G  IP
Sbjct: 150 LAPTASTTATLALGDALAVVLLRRKNFAAGDFRRNHPGGSLGERLKIRVSEVMLTGAEIP 209

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFR----NFHKDLNTLSVE 286
            V     L +A+  L+ K  G V V+  +G+ + GI+T+GD+ R        D   LS+ 
Sbjct: 210 TVAEDASLPEAVAELNRKNLGAVLVMAADGETMVGILTDGDLRRMVADGRQADFAELSLT 269

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            VM ++PK I  + L   A+ ++++H ++VL V D  ++  GI+H  D+   G
Sbjct: 270 AVMGRDPKCITPELLAADALSIMQRHEVTVLPVTDARRRLFGILHLQDMFGKG 322


>gi|323345348|ref|ZP_08085571.1| arabinose 5-phosphate isomerase [Prevotella oralis ATCC 33269]
 gi|323093462|gb|EFZ36040.1| arabinose 5-phosphate isomerase [Prevotella oralis ATCC 33269]
          Length = 324

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/288 (39%), Positives = 184/288 (63%), Gaps = 8/288 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AVE I   KG++++TG+GKSG+IG+K+A+TL+STGTP+FF++  +  HGDLG
Sbjct: 33  QLDENFSKAVEMIFHCKGKIIVTGVGKSGNIGAKIAATLSSTGTPAFFINPLDVYHGDLG 92

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   +      ++P+IA++    S++A +++I + +    E
Sbjct: 93  VMTPDDVVLALSNSGQTDELLRFIPMVLHMNVPIIAMSGNPDSLLAKYSNIHIKVWVSKE 152

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALAIAL++ RNF   DF   HPGG+LG  L   A DVM S
Sbjct: 153 ACPLNLAPTSSTTAALAMGDALAIALMQVRNFKPQDFAQFHPGGELGKRLLTTAEDVMRS 212

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGC-VAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
            D +P++     L +AI  +S+ + G  V+++D   K+ G+IT+GDI R   K       
Sbjct: 213 -DDLPIIPQEMHLGEAIIHVSKGKLGLGVSLMD--NKVSGLITDGDIRRAMEKWQAQFFD 269

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +V D+M K PK +L +T L+  ++++ ++ I  ++V D+    +G+V
Sbjct: 270 HTVGDIMTKQPKTVLPNTKLSEILRIMHKYKIHTVLVTDEENHLLGVV 317


>gi|94314654|ref|YP_587863.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
 gi|93358506|gb|ABF12594.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
          Length = 320

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/313 (39%), Positives = 183/313 (58%), Gaps = 9/313 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           ++  A + +  E R L ++ +     +S  F   V+ I ++KGR+V+ G+GKSG IG K+
Sbjct: 4   SISLAKQVVATEIRALEAMNA----RVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRKI 59

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T+ASTGTP+F VHA EA HGDLGMI   D+++++S SG ++EL  +L + R  +  +I
Sbjct: 60  AATMASTGTPAFSVHAGEAFHGDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYVI 119

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T +  S +   A+ +L +  E E+C + LAPT+S    L +GDALA+ L   R F   
Sbjct: 120 AMTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAALVMGDALAVVLASKRGFQPE 179

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L    +DVMH G ++P+        D + +++  R G +A+V +G+
Sbjct: 180 DFARFHPGGSLGRRLLTRVADVMHKG-TLPVCTAQTSFKDVVHVVNRGRMG-LALVMQGE 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L GIIT+GDI R F    D  ++  ED+M   PK I  D  +  A  LLRQ  I  L+V
Sbjct: 238 RLLGIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVV 297

Query: 320 VDDCQKAIGIVHF 332
            D   + IGI   
Sbjct: 298 QDIDGRVIGIFQM 310


>gi|318606715|emb|CBY28213.1| glucitol operon GutQ protein [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 321

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 171/295 (57%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 26  RLDNNFVHACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 85

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT    S +A  A  VL +  E E
Sbjct: 86  MIGSQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGLASPLAQGAACVLDISVEHE 145

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG   +     +M +
Sbjct: 146 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLINRVHHLMRT 205

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VA+ D  QK+ G+ T+GD+ R   K        
Sbjct: 206 GDRLPVVNESDSVMEAMLELSRTGLGLVAICDPNQKVVGVFTDGDLRRWLVKGGTLQQQL 265

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VVD   K +G ++  DL + G+
Sbjct: 266 GGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLDGKLVGAINLHDLHQAGV 320


>gi|238798999|ref|ZP_04642460.1| hypothetical protein ymoll0001_27960 [Yersinia mollaretii ATCC
           43969]
 gi|238717140|gb|EEQ08995.1| hypothetical protein ymoll0001_27960 [Yersinia mollaretii ATCC
           43969]
          Length = 299

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 173/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFIRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A +A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGKESPLALNAACVLDISVEQE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPDQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VV+   K +G ++  DL + GI
Sbjct: 244 AGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGAINLHDLHQAGI 298


>gi|62181341|ref|YP_217758.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128974|gb|AAX66677.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322715824|gb|EFZ07395.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 321

 Score =  208 bits (529), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/301 (41%), Positives = 174/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L IGDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMIGDALAMAVMQARGFNEEDFARSHPAGTLGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+V  VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITVAPVVDENSKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|281424281|ref|ZP_06255194.1| arabinose 5-phosphate isomerase [Prevotella oris F0302]
 gi|281401550|gb|EFB32381.1| arabinose 5-phosphate isomerase [Prevotella oris F0302]
          Length = 326

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/322 (36%), Positives = 195/322 (60%), Gaps = 13/322 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGI 72
           M N  ++  L+++   + G  +L+   Q       +L   F  AVE +    G++++TG+
Sbjct: 1   MNNIDIENRLKNVC--EWGAQALKEEAQAILELIPQLDDNFTKAVEMMAHCHGKIIVTGV 58

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSG++G+K+A+TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   + 
Sbjct: 59  GKSGNVGAKIAATLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIP 118

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
                +IP+I++T    S++A +++  + +  + E+CP  LAPT+S    LA+GDALAIA
Sbjct: 119 MVLHMNIPIISMTGNPNSLLAKYSNAHIKVYVKKEACPLNLAPTSSTTAALAMGDALAIA 178

Query: 193 LLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L++ R+F   DF   HPGG+LG  L   A+DVM + D +P++     L +AI  +S+ + 
Sbjct: 179 LMQVRDFRPQDFAQFHPGGELGKRLLTTAADVMRTND-LPVIPQEMHLGEAIICVSKGQL 237

Query: 252 GCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G    +    K+ G+IT+GDI R    +  +    +V D+M K PK++L  T +T   ++
Sbjct: 238 GLGVSLGADNKVIGLITDGDIRRAMERWQAEFFDHTVSDIMTKTPKLVLPTTKITEIQRI 297

Query: 309 LRQHNISVLMVVDDCQKAIGIV 330
           +  H I  ++VVD+ +  +G+V
Sbjct: 298 MHNHKIHTVLVVDEERHLLGVV 319


>gi|284926652|gb|ADC29004.1| arabinose 5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 315

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/297 (39%), Positives = 178/297 (59%), Gaps = 7/297 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  R G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGRLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +++M  NPKV+  D + + A +++ +H I  ++V  + ++ +GI+    + R
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIIVGKE-ERVMGIIQLYAIGR 314


>gi|86151994|ref|ZP_01070207.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124881|ref|YP_004066885.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841102|gb|EAQ58351.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018603|gb|ADT66696.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 315

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 178/292 (60%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ A+  +   KGR +I+G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAINLMLNTKGRCIISGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +A   DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLAKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL+++RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKARNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENKKLVGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ ++ I  ++V  + +K +GI+  
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKEIIVGKE-EKVVGIIQL 309


>gi|257125308|ref|YP_003163422.1| KpsF/GutQ family protein [Leptotrichia buccalis C-1013-b]
 gi|257049247|gb|ACV38431.1| KpsF/GutQ family protein [Leptotrichia buccalis C-1013-b]
          Length = 325

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/319 (40%), Positives = 189/319 (59%), Gaps = 14/319 (4%)

Query: 31  IIAEKRGLSSLE----SSLQGELSFQFHCAVEKIKAIKG-RVVITGIGKSGHIGSKLAST 85
           II E + +  +E      L+  +   F   V  I  +K  +VV+TGIGKSG IG K+A+T
Sbjct: 5   IIKEAKSVFDIEITELEKLKNRIGDSFQKLVNTIMELKNNKVVVTGIGKSGIIGEKIAAT 64

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT + F++AAEA HGDLG+I+  D++I +S SG+SDE+ +IL   R+    ++  T
Sbjct: 65  LASTGTTAVFLNAAEALHGDLGIISNGDVVIAISNSGNSDEILSILSPIRKIGGKIVGFT 124

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +  +ADI + +  E E+CP G AP +S    L  GDALA+ L++ +NFSE+DF 
Sbjct: 125 GNPNSTLGKYADITINVGVEKEACPLGQAPMSSTTSTLVTGDALAVCLMKLKNFSESDFA 184

Query: 206 VLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---Q 261
             HPGG LG  L +  SD+MH G+ +P+VK    + + +  L++K+ G V + D G    
Sbjct: 185 KYHPGGSLGKRLLLHVSDLMHIGEELPVVKKDEKIENVLMTLTKKKLGAVCISDTGFGNG 244

Query: 262 KLKGIITEGDIFRNF-HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVL 317
           KL GIITEGDI R   HK+        D+MI  P  I +D +   A+ L+  R+  ISVL
Sbjct: 245 KLLGIITEGDIRRALEHKEKFFDYKASDIMISTPVTIEKDAMALDALHLMENRKSQISVL 304

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VV++    +G++   DL+
Sbjct: 305 PVVENGN-VVGLIRVHDLI 322


>gi|225620913|ref|YP_002722171.1| D-arabinose-5-phosphate isomerase [Brachyspira hyodysenteriae WA1]
 gi|225215733|gb|ACN84467.1| D-arabinose-5-phosphate isomerase [Brachyspira hyodysenteriae WA1]
          Length = 320

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/298 (42%), Positives = 181/298 (60%), Gaps = 7/298 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  +L   F  AV+++  I+GRV+ +G+GKSGHI  K A+T ASTGTPSFFV   E  HG
Sbjct: 21  LSDKLDSNFENAVKELFNIRGRVITSGVGKSGHIARKAAATFASTGTPSFFVDPNECMHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D GMIT++D  ++ S  G S E+  ++ +  R +IP IAIT++  S ++ +A I L    
Sbjct: 81  DFGMITKEDYCLLYSKGGESREIIELVNWLCRQNIPYIAITNDINSTLSKNAKITLLTHV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           + E+CP  LAPT S    LA+ DALA AL+E R F   DF V HPGG LG        +M
Sbjct: 141 KEEACPLRLAPTVSTTASLALSDALATALMELRGFRAEDFAVFHPGGSLGRQLAKVKSIM 200

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LN 281
           H+ +++P++     L DA+  + E + G   VVD+   LKGII +GD+ R   KD    N
Sbjct: 201 HT-ENLPIIFPNTSLQDALFKIIECKLGIAIVVDDKNILKGIIVDGDLKRLLVKDDDIKN 259

Query: 282 TLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LS  V+ +M  +PKVI EDTL+  A+ ++ +  I+ L+VV++    IGIVH  D+L+
Sbjct: 260 ILSKEVKYIMNTSPKVIYEDTLIGEALHIM-EGKITNLVVVNNNNNPIGIVHIHDILK 316


>gi|51244654|ref|YP_064538.1| polysialic acid capsule expression protein (KpsF) [Desulfotalea
           psychrophila LSv54]
 gi|50875691|emb|CAG35531.1| related to polysialic acid capsule expression protein (KpsF)
           [Desulfotalea psychrophila LSv54]
          Length = 327

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/328 (38%), Positives = 193/328 (58%), Gaps = 13/328 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++K+ +++ A + +  E++GL+++  ++ GE   +F  AVE I     R+VITGIGKSG 
Sbjct: 1   MVKHMSIEAAKKVLEIEEQGLAAVRENI-GE---EFLAAVEAIVNCPTRLVITGIGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+++TL S GT SFF+H  EA HGDLGM+   D+++ +S+SG + EL  +L   +  
Sbjct: 57  VGQKISATLNSIGTSSFFLHPVEALHGDLGMVMATDVVLAISYSGETAELNGLLRSLKAR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I +T   KS +A  +DI L +    E+CP GLAPTTS    +A+GDAL + LL  +
Sbjct: 117 GNTIIGMTGGAKSTLAMASDIFLNIRIPAEACPLGLAPTTSTTATMALGDALGVVLLNRK 176

Query: 198 NFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSE---KRFGC 253
            F   DF   HPGG LG  L V  ++VM +G  +P+V    P  DAI  L+E   K  G 
Sbjct: 177 QFKAEDFRFNHPGGSLGERLKVKVAEVMITGSDMPMV---APDQDAIAALAELNSKNVGA 233

Query: 254 VAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           V VV +   L GIIT+GD+ R     + L  L   D+M K+P  I +  L   A+ +++Q
Sbjct: 234 VLVVADTGMLAGIITDGDVRRYVLDAEALEGLCAADLMTKHPLTIGDGVLAADALSIMQQ 293

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           H ++VL VV +  + +G+++   LL  G
Sbjct: 294 HEVTVLPVVSEEMRLVGLLNLHKLLGKG 321


>gi|255535741|ref|YP_003096112.1| Arabinose 5-phosphate isomerase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341937|gb|ACU08050.1| Arabinose 5-phosphate isomerase [Flavobacteriaceae bacterium
           3519-10]
          Length = 319

 Score =  207 bits (528), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/324 (38%), Positives = 190/324 (58%), Gaps = 8/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +    R+ I  +  +S LE+ L+  L   F  AVE I + KG++++ GIGKS H+
Sbjct: 1   MNNEEILRTARTAIETE--ISELEN-LKNRLDASFLKAVEIINSSKGKLIVVGIGKSAHV 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+ +TL STGTPS F+HA+EA HGDLG+I + D+++ +S SG+S E+  +L Y + +S
Sbjct: 58  GNKIVATLNSTGTPSQFLHASEALHGDLGVIQKSDVVLCISNSGNSPEIVNLLTYLKGYS 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI +T    S +A  +D+VL    E E+CP  LAPT+S  +Q+A+GD LA+ L+E   
Sbjct: 118 SALIGMTGNLNSKLAEISDVVLNTSVEKEACPIKLAPTSSTTVQMALGDVLAVCLMEING 177

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F E+DF   HPGG LG       +   S    P V     + + I  +S    G   V D
Sbjct: 178 FKESDFAKFHPGGALGKNLTAKVEQFLSPQK-PQVSENAGIREIIISISASTHGITVVTD 236

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + +++ G+IT+GD+ R     ++L  ++  D+M KNPK + ++ L   AMQ+L+  NI  
Sbjct: 237 D-ERITGVITDGDLRRMLISQQNLTKVTAVDIMTKNPKSVDKNALAKEAMQILKDKNIGQ 295

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L+V D+ + + GI+    LL  GI
Sbjct: 296 LIVTDNGKYS-GIIDIHRLLDEGI 318


>gi|123441436|ref|YP_001005423.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088397|emb|CAL11188.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 321

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 171/295 (57%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 26  RLDNNFVHACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 85

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IA+T    S +A  A  VL +  E E
Sbjct: 86  MIGSQDVLIFISYSGRAKELDLILPLLADSHIPVIAMTGGLASPLAQGAACVLDISVEHE 145

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG   +     +M +
Sbjct: 146 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLINRVHHLMRT 205

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  QK+ G+ T+GD+ R   K        
Sbjct: 206 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPNQKVVGVFTDGDLRRWLVKGGTLQQQL 265

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VVD   K +G ++  DL + G+
Sbjct: 266 GGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLDGKLVGAINLHDLHQAGV 320


>gi|332876798|ref|ZP_08444556.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685357|gb|EGJ58196.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 316

 Score =  207 bits (528), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/291 (41%), Positives = 178/291 (61%), Gaps = 9/291 (3%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           +L   F  AV+ +    G+V+ITG+GKSGHIG+K+A+TL+STGTP+FF++  +  HGDLG
Sbjct: 25  QLDEHFDAAVDLMLRCTGKVIITGVGKSGHIGAKMAATLSSTGTPAFFINPLDVFHGDLG 84

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD++I +S SG +DEL   + Y     IPLI I+    S++A ++   L +    E
Sbjct: 85  VMTPDDVVIAISNSGQTDELLRFIPYLLEHHIPLIGISGNPDSLLAKYSTCHLVVKVSHE 144

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALA AL+E R+F   DF   HPGG LG  L   A DVM S
Sbjct: 145 ACPLNLAPTSSTTATLAMGDALACALIEMRHFQAKDFAQFHPGGTLGKRLLTTAHDVMRS 204

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
            D +P++  G  L +AI  +S+ + G CVA VD   K+ G+IT+GD+ R   +       
Sbjct: 205 ND-LPVIPPGMKLGEAIIHVSKGKLGLCVAQVD--GKVVGLITDGDVRRAMESLQDKFFN 261

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
           + VE VM + PK +  DT +     ++  + I  ++VVD+ +  +G+V HF
Sbjct: 262 VPVEQVMTRTPKCVSPDTKIAKIQDIMHNNKIHTVLVVDEDRHLLGVVDHF 312


>gi|238783817|ref|ZP_04627835.1| hypothetical protein yberc0001_28900 [Yersinia bercovieri ATCC
           43970]
 gi|238715204|gb|EEQ07198.1| hypothetical protein yberc0001_28900 [Yersinia bercovieri ATCC
           43970]
          Length = 299

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/295 (43%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFIRACELLLACSGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGKESPLAQGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPHQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VVD   K +G ++  DL + GI
Sbjct: 244 AGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLQGKLVGAINLHDLHQAGI 298


>gi|160877630|ref|ZP_02063067.1| KpsF protein [Campylobacter jejuni subsp. jejuni CG8486]
 gi|160694286|gb|EDP84474.1| KpsF protein [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 315

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 177/292 (60%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +   +DI L +  
Sbjct: 81  DLGMLTPEDVLITISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  ++V  + +K +GI+  
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIIVGKE-EKVVGIIQL 309


>gi|238788149|ref|ZP_04631944.1| hypothetical protein yfred0001_35970 [Yersinia frederiksenii ATCC
           33641]
 gi|238723736|gb|EEQ15381.1| hypothetical protein yfred0001_35970 [Yersinia frederiksenii ATCC
           33641]
          Length = 299

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 126/295 (42%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLAENQIPVIAITGGKESPLALGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPKQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 244 TGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLEGKLVGAINLHDLHQAGV 298


>gi|283786745|ref|YP_003366610.1| D-arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
 gi|282950199|emb|CBG89835.1| D-arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
          Length = 321

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 175/301 (58%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTIIHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPGSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R FSE DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFSEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D++P V++   ++DA+  LS    G VAV D  Q++ G+ T+GD+ R       
Sbjct: 201 HLMRRDDAVPQVQLSASVMDAMLELSRTGLGLVAVCDAQQQVNGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M +N   +  D+    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTRNGITLQADSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           +
Sbjct: 321 L 321


>gi|225873294|ref|YP_002754753.1| sugar isomerase, KpsF/GutQ family [Acidobacterium capsulatum ATCC
           51196]
 gi|225792081|gb|ACO32171.1| sugar isomerase, KpsF/GutQ family [Acidobacterium capsulatum ATCC
           51196]
          Length = 331

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/295 (40%), Positives = 173/295 (58%), Gaps = 7/295 (2%)

Query: 47  GELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           G +   F  AVE + A    +GRVV+TG+GKSG I  K+A+TL+STGTP+ F+H AEA H
Sbjct: 32  GPMQAAFERAVETVIACGRDRGRVVVTGMGKSGLIAQKIAATLSSTGTPALFLHPAEAVH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI R D+++ LS SG ++E+  +L   +R    L++      S +A  +D+ L + 
Sbjct: 92  GDLGMIARGDVVLALSASGETEEILRLLATLKRMGDALLSFCCNLNSTLAGASDVALDVS 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
              E+C  GLAPT S    LA+GDALAIA+   + F   DF  LHPGGKLG       ++
Sbjct: 152 VPGEACDLGLAPTASTTAMLALGDALAIAVSMRKGFRAEDFAELHPGGKLGKRLARVHEL 211

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT 282
           MH+G+++P V    P+ D I  +S K  G   VV++G +L GI+++GD+ R   H+    
Sbjct: 212 MHAGEALPRVTPATPMKDVIYEMSRKGLGMTTVVEDG-RLAGILSDGDLRRLLEHEGAAC 270

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  +  +VM   P++I    L   A+  + +  I+ L+VVDD     G++H  DL
Sbjct: 271 LDKTAAEVMNPRPQIIAPGELAARALHRMEERKITSLVVVDDAGVLQGVLHLHDL 325


>gi|157415669|ref|YP_001482925.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386633|gb|ABV52948.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 315

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/292 (40%), Positives = 174/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LATNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTSEDVLIAISNSGETEEILKIIPAIKKREIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D I +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLIDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  + VV    K +GI+  
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKENKVVGIIQL 309


>gi|57238467|ref|YP_179598.1| arabinose-5-phosphate isomerase [Campylobacter jejuni RM1221]
 gi|57167271|gb|AAW36050.1| arabinose-5-phosphate isomerase [Campylobacter jejuni RM1221]
 gi|315058899|gb|ADT73228.1| Capsular polysaccharide export system protein KpsF [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 315

 Score =  207 bits (527), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 117/292 (40%), Positives = 175/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +   +DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  + VV    K IGI+  
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKENKIIGIIQL 309


>gi|121612774|ref|YP_001001093.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|62754291|gb|AAX99155.1| KpsF [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249745|gb|EAQ72704.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 315

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/292 (39%), Positives = 175/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +   +DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQSDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  + VV    K +GI+  
Sbjct: 259 FDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKEDKVVGIIQL 309


>gi|262199116|ref|YP_003270325.1| KpsF/GutQ family protein [Haliangium ochraceum DSM 14365]
 gi|262082463|gb|ACY18432.1| KpsF/GutQ family protein [Haliangium ochraceum DSM 14365]
          Length = 334

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 114/283 (40%), Positives = 168/283 (59%), Gaps = 4/283 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A+E ++   G VVI G+GKSG IG K+A+TLASTGTPSFFVH AEA HGDLGMIT  
Sbjct: 50  FTRAIELLRTTPGHVVICGMGKSGLIGQKIAATLASTGTPSFFVHPAEAYHGDLGMITAQ 109

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           + +++LS+SG ++E+  +L + +R  +PLI +     S +A   D+ L +  E E+CP+ 
Sbjct: 110 NTVMLLSYSGETEEVVRLLPHLQRMRVPLIGLVGRLDSTLARQVDVALDVSVEREACPNN 169

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIP 231
           LAPT+S +  LA+GDALA++L+  R F  +DF   HPGG LG    C  +D+M     +P
Sbjct: 170 LAPTSSTLAALAMGDALAVSLIHERKFGPHDFARFHPGGSLGRRLCCNVADLMRIA-PLP 228

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVM 289
           L++    L +A+  L++ RFG   VVD  +K  G+ITE D+          L+  V  +M
Sbjct: 229 LLRPQDALREAVLTLAQGRFGIAVVVDAARKPLGVITEADLRTTLDAAEQPLAMPVSMIM 288

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +   VI  +  +  A Q+  +    VL+  D+  K +GI+  
Sbjct: 289 RRELPVIEANARINDAEQVALRLGTEVLIATDENDKVVGILDL 331


>gi|325269085|ref|ZP_08135706.1| arabinose 5-phosphate isomerase [Prevotella multiformis DSM 16608]
 gi|324988706|gb|EGC20668.1| arabinose 5-phosphate isomerase [Prevotella multiformis DSM 16608]
          Length = 322

 Score =  207 bits (526), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/311 (36%), Positives = 187/311 (60%), Gaps = 14/311 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +QC      A    ++ L+ +    +S  +HCA        G+V++TG+GKSG+IG+K+A
Sbjct: 15  IQCIKEETEATLNLINQLDENFDKAVSLMYHCA--------GKVIVTGVGKSGNIGAKIA 66

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I 
Sbjct: 67  ATLSSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIG 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +++  +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  RNF   D
Sbjct: 127 MSAHPESLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPQD 186

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG+LG  L   A DVM S D +P++     L +AI  +S+ + G    + +G K
Sbjct: 187 FAQFHPGGELGKRLLTTAQDVMRS-DDLPVIPKEMHLGEAIIHVSKGKLGLGVSLADG-K 244

Query: 263 LKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + G+IT+GDI R    +  +    +V D+M + PK +L  T +T   +++ Q+ I  ++V
Sbjct: 245 VIGLITDGDIRRAMERWQAEFFDHTVSDIMTREPKTVLPTTKITEIQRIMHQNKIHTVLV 304

Query: 320 VDDCQKAIGIV 330
            D  +  +G+V
Sbjct: 305 CDAGRHLLGVV 315


>gi|237736451|ref|ZP_04566932.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421493|gb|EEO36540.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           mortiferum ATCC 9817]
          Length = 322

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/316 (39%), Positives = 189/316 (59%), Gaps = 12/316 (3%)

Query: 29  RSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           RS+  AE   L  +++SL G+++      VE I  +KG+VV+TGIGKSG IG K+A+TLA
Sbjct: 10  RSVFEAEIEELGRVKNSLDGDIT----KVVELILGMKGKVVVTGIGKSGLIGKKIAATLA 65

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT + F+++AE  HGDLGMI  +D+++ +S SG+SDE+ ++L   ++    L+A+T  
Sbjct: 66  STGTTAIFMNSAEGLHGDLGMIAPNDVVLAISNSGNSDEIVSLLPSIQKIGAKLVAMTGN 125

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD VL +    E CP  LAP +SA   L +GDALA  L++ R+F   +F + 
Sbjct: 126 RNSKLGKAADYVLNIGVSREGCPLNLAPMSSATATLVMGDALAAILIKRRDFRPENFALY 185

Query: 208 HPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG LG  L +   D+M  GD IP+     P+ + I  +++K  G V V++ G  + GI
Sbjct: 186 HPGGSLGKRLLMRVRDIMKKGDEIPVCDKESPIKNVILTMTDKSLGAVCVMN-GDLMVGI 244

Query: 267 ITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDD 322
           ITEGDI R   K  +  T   +D+M +N      +++   A++L+  R   I+VL V+DD
Sbjct: 245 ITEGDIRRALTKEGEFFTFKAKDIMTRNFTRTDSNSMAIDALELMENRPSQITVLPVIDD 304

Query: 323 CQKAIGIVHFLDLLRF 338
             K +G+V   DLL  
Sbjct: 305 -NKLVGMVRVHDLLNI 319


>gi|295097289|emb|CBK86379.1| KpsF/GutQ family protein [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 321

 Score =  207 bits (526), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 178/301 (59%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V++ GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGEDFVRAANTIIHCEGKVIVAGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SGS+ EL  I+   +  S+ L+A+T +++S +A  A   L +
Sbjct: 81  HGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKSVALLAMTGKSRSPLALAAKATLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            +M + D+IP VK+   ++DA+  LS    G VAV D  +++KG+ T+GD+ R       
Sbjct: 201 HLMRTDDAIPQVKLDTSVMDAMLELSRTGLGLVAVCDNDRQVKGVFTDGDLRRWLVGGGK 260

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               V + M +    +  D+    A ++L +  I+   VVD+  +  G ++  D  + GI
Sbjct: 261 LEARVSEAMTQGGLTLNADSRAIEAKEVLMKRKITAAPVVDEHGRLCGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|299140980|ref|ZP_07034118.1| arabinose 5-phosphate isomerase [Prevotella oris C735]
 gi|298577946|gb|EFI49814.1| arabinose 5-phosphate isomerase [Prevotella oris C735]
          Length = 326

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/322 (35%), Positives = 195/322 (60%), Gaps = 13/322 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGI 72
           M N  ++  L+++   + G  +L+   Q       +L   F  AVE +    G++++TG+
Sbjct: 1   MNNIDIENRLKNVC--EWGAQALKEEAQAILELIPQLDDNFTKAVEMMAHCHGKIIVTGV 58

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSG++G+K+A+TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   + 
Sbjct: 59  GKSGNVGAKIAATLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIP 118

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
                +IP+I++T    S++A +++  + +  + E+CP  LAPT+S    LA+GDALAIA
Sbjct: 119 MVLHMNIPIISMTGNPNSLLAKYSNAHIKVYVKKEACPLNLAPTSSTTSALAMGDALAIA 178

Query: 193 LLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L++ R+F   DF   HPGG+LG  L   A+DVM + D +P++     L +AI  +S+ + 
Sbjct: 179 LMQVRDFRPQDFAQFHPGGELGKRLLTTAADVMRTND-LPVIPQEMHLGEAIICVSKGQL 237

Query: 252 GCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G    +    K+ G+IT+GDI R    +  +    +V D+M + PK++L  T +T   ++
Sbjct: 238 GLGVSLGADNKVIGLITDGDIRRAMERWQAEFFDHTVSDIMTRTPKLVLPTTKITEIQRI 297

Query: 309 LRQHNISVLMVVDDCQKAIGIV 330
           +  H I  ++VVD+ +  +G+V
Sbjct: 298 MHNHKIHTVLVVDEEKHLLGVV 319


>gi|303237607|ref|ZP_07324167.1| putative arabinose 5-phosphate isomerase [Prevotella disiens
           FB035-09AN]
 gi|302482059|gb|EFL45094.1| putative arabinose 5-phosphate isomerase [Prevotella disiens
           FB035-09AN]
          Length = 316

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/291 (39%), Positives = 182/291 (62%), Gaps = 6/291 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AVE +   KG+V++TG+GKSG+IG+K+A+TL+STGTP+FF +  +  H
Sbjct: 21  ALIDQLDENFDKAVELMYHCKGKVIVTGVGKSGNIGAKIAATLSSTGTPAFFANPLDVFH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG +T+DD+++ LS SG +DEL   +      +IP+I +++  +S++A +A   + + 
Sbjct: 81  GDLGAMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGMSAHPESLLAKYATAHIKVW 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            E E+CP  LAPT+S    L +GDALA+AL+E R F   DF   HPGG+LG  L   A D
Sbjct: 141 VEKEACPLNLAPTSSTTAALVMGDALAVALMEKRKFRPTDFAQFHPGGELGKRLLTTAQD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           VM S D +P++     L +AI  +S  + G + V  E  K+ G+IT+GDI R   K    
Sbjct: 201 VMRSED-MPIIPKDMHLGEAIIHVSNGKLG-LGVSIENDKVIGLITDGDIRRAMEKWQAK 258

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +VED+M + PK++L +T +    ++++Q+ I  ++V ++  K +G+V
Sbjct: 259 FFDHTVEDIMTRQPKMVLPNTKIAEIQRIMQQNKIHTVLVCNENGKLLGVV 309


>gi|261880669|ref|ZP_06007096.1| arabinose 5-phosphate isomerase [Prevotella bergensis DSM 17361]
 gi|270332622|gb|EFA43408.1| arabinose 5-phosphate isomerase [Prevotella bergensis DSM 17361]
          Length = 328

 Score =  206 bits (525), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 114/314 (36%), Positives = 193/314 (61%), Gaps = 9/314 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + ++  A R +  E + +S L      +L   F  AVE +   +G++++TG+GKSG+IG+
Sbjct: 10  HQSIDYAKRCLTEEAQAISDL----MLQLDDSFTRAVELMYHCRGKIIVTGVGKSGNIGA 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A TL+STGTP+FF++  +A HGDLG++T DD+++ LS SG +DEL   +      +IP
Sbjct: 66  KIAGTLSSTGTPAFFINPLDAYHGDLGVMTSDDVVLALSNSGQTDELLRFIPILLHMNIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ ++   +S++A ++ + + +  + E+CP  LAPT+S    L +GDALAIAL++ R+F 
Sbjct: 126 IVGMSRNPESLLAKYSTVHIKVWVDHEACPLNLAPTSSTTAALVMGDALAIALMQVRDFR 185

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG+LG  L   A DVMH+ D +P++     L DAI  +S  + G    +D+
Sbjct: 186 PHDFAHFHPGGELGKRLLTTAEDVMHT-DDLPIIPEEMHLGDAIIEVSRGKLGLGVSLDD 244

Query: 260 GQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            + + GIIT+GDI R    +  +    +V D+M + PK++  +T +T   +++ ++ I  
Sbjct: 245 RRHVTGIITDGDIRRAMERWQAEFFNHTVADIMTREPKMVRLNTKITEIQRIMHKYKIHS 304

Query: 317 LMVVDDCQKAIGIV 330
           ++V DD  +  GIV
Sbjct: 305 VLVCDDRMEFRGIV 318


>gi|167550324|ref|ZP_02344081.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205324836|gb|EDZ12675.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 321

 Score =  206 bits (524), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SGS+ EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGSAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A+++ R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQERGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|238758853|ref|ZP_04620026.1| hypothetical protein yaldo0001_24340 [Yersinia aldovae ATCC 35236]
 gi|238702961|gb|EEP95505.1| hypothetical protein yaldo0001_24340 [Yersinia aldovae ATCC 35236]
          Length = 317

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 127/295 (43%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 22  RLDNNFIRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 81

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI R D++I +S+S  + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 82  MIGRQDVLIFISYSSRAKELDLILPLLADSHIPVIAITGGLESPLAQGAACVLDISVEHE 141

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 142 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGAKLLNRVHHLMRT 201

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 202 GDRLPVVNESDTVMEAMLELSRTGLGLVAVCDPNQRVVGVFTDGDLRRWLVKGGTLQQPL 261

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 262 GGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGALNLHDLHQAGV 316


>gi|86152774|ref|ZP_01070979.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843659|gb|EAQ60869.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 315

 Score =  206 bits (523), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 176/292 (60%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIVV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ +H I  ++V  + +K +GI+  
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIIVGKE-EKVVGIIQL 309


>gi|238763569|ref|ZP_04624530.1| hypothetical protein ykris0001_7840 [Yersinia kristensenii ATCC
           33638]
 gi|238698201|gb|EEP90957.1| hypothetical protein ykris0001_7840 [Yersinia kristensenii ATCC
           33638]
          Length = 317

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 126/295 (42%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 22  RLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 81

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 82  MIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGLESPLALAAACVLDISVEHE 141

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 142 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 201

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 202 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPNQRVVGVFTDGDLRRWLVKGGTLQQPL 261

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 262 GGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGAINLHDLHQAGV 316


>gi|307748310|gb|ADN91580.1| Arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 315

 Score =  206 bits (523), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 174/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ ++ I  + VV    K +GI+  
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKEI-VVSKENKVVGIIQL 309


>gi|313157307|gb|EFR56732.1| sugar isomerase, KpsF/GutQ family [Alistipes sp. HGB5]
          Length = 321

 Score =  205 bits (522), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/295 (38%), Positives = 182/295 (61%), Gaps = 6/295 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++  L   F  AVE I + +G+ ++TG+GKSG +G K+A+TLASTGTPSFF+H  EA HG
Sbjct: 27  MKETLGDNFADAVEMILSGQGKCIVTGMGKSGLVGRKIAATLASTGTPSFFLHPGEAFHG 86

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI+++D+++ LS+SG +DE+  I+ +       LI++T   +S +A ++D+ L +  
Sbjct: 87  DLGMISKEDVVLALSYSGETDEILKIVPFIHSNGNKLISMTGNPESALAKNSDVHLDVSV 146

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+C   LAPTTS   Q+A+GDALA++L++ R F+  DF  LHPGG LG  L +   +V
Sbjct: 147 EEEACILHLAPTTSTTAQIAMGDALAVSLMQMRGFTSVDFARLHPGGSLGRRLLMTVGNV 206

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-- 281
           M S D +P+V   C   D I  +S+   G + + D G +++GI+T+GD+ R   +     
Sbjct: 207 MRSHD-LPVVAPDCSATDMIHAISKGGLGLIIICD-GDRIEGIVTDGDVRRAMERRRAEF 264

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +   D+   NPK I  D  L  A +++ ++ ++ L+V D+  K  G++   D+
Sbjct: 265 FNIKAADIATPNPKTISADRKLIEAEKMMTRNKVTSLLVTDEAGKLQGVIQIYDI 319


>gi|146312821|ref|YP_001177895.1| D-arabinose 5-phosphate isomerase [Enterobacter sp. 638]
 gi|145319697|gb|ABP61844.1| KpsF/GutQ family protein [Enterobacter sp. 638]
          Length = 321

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 178/302 (58%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V++ GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTIIQCEGKVIVAGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SGS+ EL  I+   +  S+ L+A+T +++S +A  A   L +
Sbjct: 81  HGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKSVALLAMTGKSRSPLALAAKATLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
            +M + +++P VK+   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRTEEAVPQVKLSTSVMDAMLELSRTGLGLVAVCDETGLVKGVFTDGDLRRWLVGGGG 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L  + V + M      +  ++    A ++L +  I+   VVDD  K  G ++  D  + G
Sbjct: 261 LEAI-VSEAMTAGGLTLNAESRAIEAKEILMKRKITAAPVVDDSGKLCGAINLQDFYQAG 319

Query: 340 II 341
           II
Sbjct: 320 II 321


>gi|1170710|sp|P42502|KPSF1_ECOLX RecName: Full=Polysialic acid capsule expression protein kpsF
 gi|455424|gb|AAB51623.1| KpsF [Escherichia coli]
          Length = 317

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 123/302 (40%), Positives = 178/302 (58%), Gaps = 11/302 (3%)

Query: 27  ALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           ++R  +AE+   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+++T
Sbjct: 21  SVRQTLAEEGARLQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKMSAT 77

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +IAIT
Sbjct: 78  LASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRIIAIT 137

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  NDF 
Sbjct: 138 NNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPNDFA 197

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    +DVM     +P V++       I  ++    G V V D    L 
Sbjct: 198 RYHPGGSLGRRLLTRVADVMQH--DVPAVQLDASFKTVIQRITSGCQGMVMVEDAEGGLA 255

Query: 265 GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++     L V+ D
Sbjct: 256 GIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKD--KCLNVIGD 313

Query: 323 CQ 324
            Q
Sbjct: 314 QQ 315


>gi|205356122|ref|ZP_03222889.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345965|gb|EDZ32601.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 315

 Score =  205 bits (522), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 175/295 (59%), Gaps = 7/295 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+        D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIAHPDTEFNDLVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                +++M  NPKV+  D + + A +++ +H I  + VV    K +GI+   ++
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKEDKVVGIIQLYEI 312


>gi|317503416|ref|ZP_07961458.1| arabinose 5-phosphate isomerase [Prevotella salivae DSM 15606]
 gi|315665468|gb|EFV05093.1| arabinose 5-phosphate isomerase [Prevotella salivae DSM 15606]
          Length = 326

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 185/291 (63%), Gaps = 5/291 (1%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L  +L   F  AVE +    G++++TG+GKSG+IG+K+A+TLASTGTP+FF++  +  H
Sbjct: 30  NLIPQLDENFTKAVEMMAHCHGKIIVTGVGKSGNIGAKIAATLASTGTPAFFINPLDVYH 89

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++T DD+++ LS SG +DEL   +      +IP+I++T+ + S++A ++ + + + 
Sbjct: 90  GDLGVMTPDDVVLALSNSGQTDELLRFIPMVLHMNIPIISMTANSNSLLAKYSKVHIKVY 149

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
            + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF   HPGG+LG  L   A+D
Sbjct: 150 VKKEACPLNLAPTSSTTAALAMGDALAIALMQVRDFRPQDFAQFHPGGELGKRLLTTAAD 209

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKD 279
           VM + D +P++     L +AI  +S+   G    + + +++ G+IT+GDI R    +   
Sbjct: 210 VMRTND-LPIIPQDMHLGEAIICVSKGLLGLGVSLGDDKRVIGLITDGDIRRAMERWQAK 268

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +V D+M K PK +L  T +T   +++ +H I  ++VVD+ +  +G+V
Sbjct: 269 FFDHTVSDIMTKTPKFVLPTTKITEIQRIMHRHKIHTVLVVDEEKHLLGVV 319


>gi|317050377|ref|YP_004111493.1| KpsF/GutQ family protein [Desulfurispirillum indicum S5]
 gi|316945461|gb|ADU64937.1| KpsF/GutQ family protein [Desulfurispirillum indicum S5]
          Length = 316

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 118/290 (40%), Positives = 164/290 (56%), Gaps = 4/290 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  +VE I   +GRV++ G+GKSG IG K+A+T+ASTGTPSFF+H  EA HGDLGM
Sbjct: 28  LDMDFARSVEAILQSRGRVIVCGMGKSGIIGKKIAATMASTGTPSFFMHPGEAYHGDLGM 87

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +T DD+ I +S SG +DE+  ++ + +     LIA+T    S +A  A   L      E+
Sbjct: 88  VTPDDVFIAISHSGETDEVVKLIPFLQDNGNYLIALTGNPASTLARAAHSHLNTGVTREA 147

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CP  LAPT+S    L +GDALA+ L+E+RNF   +F   HPGG LG   +   + +   D
Sbjct: 148 CPLQLAPTSSTTATLVLGDALAVTLMEARNFQPENFARFHPGGSLGRKLLTRVEQVMKQD 207

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSV 285
           ++P V     + D I  +SE R G   VV+    L GIIT+GD+ R   K   D   LS 
Sbjct: 208 NLPFVDSQTGMKDIIHTMSEGRCGLAIVVNAQNFLVGIITDGDLRRAMDKRQEDFFRLSA 267

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +D+M + PK +   T L  A  L+    I+ L+V  D  +  GI+   DL
Sbjct: 268 QDIMTREPKTVAPQTRLVDAEALMISRKINSLLVAQDL-RVSGIIQLYDL 316


>gi|283956817|ref|ZP_06374291.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791678|gb|EFC30473.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 315

 Score =  205 bits (522), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 114/292 (39%), Positives = 176/292 (60%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ ++ I  ++V  + +K +GI+  
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKEIIVGKE-EKVVGIIQL 309


>gi|161502116|ref|YP_001569228.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863463|gb|ABX20086.1| hypothetical protein SARI_00133 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 321

 Score =  205 bits (521), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVSGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|168262050|ref|ZP_02684023.1| gutQ protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|168464038|ref|ZP_02697955.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633222|gb|EDX51636.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|205349241|gb|EDZ35872.1| gutQ protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 321

 Score =  205 bits (521), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPKRLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|237729662|ref|ZP_04560143.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
 gi|226908268|gb|EEH94186.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
          Length = 321

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALAIA++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMRLAPTSSTVNTLMMGDALAIAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP VK+   ++DA+  LS    G VAV D+   +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVKLTTSVMDAMLELSRTGLGLVAVCDDQSLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M +N   +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTQVSEAMTQNGITLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|283955047|ref|ZP_06372550.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793414|gb|EFC32180.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 315

 Score =  205 bits (521), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 174/291 (59%), Gaps = 5/291 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    D+ L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKENSTLVKQGDVFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG   +     +
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLN 281
              +++P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K   
Sbjct: 201 MVANNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTNDKPRF 259

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +++M  NPKV+  D + + A +++ +H I  ++V  + ++ +GI+  
Sbjct: 260 DFKAKEIMSTNPKVVDVDAMASEAEEIMLKHKIKEIIVGKE-ERVVGIIQL 309


>gi|16761615|ref|NP_457232.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143099|ref|NP_806441.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161615738|ref|YP_001589703.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168235868|ref|ZP_02660926.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242566|ref|ZP_02667498.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194450477|ref|YP_002046798.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194735521|ref|YP_002115790.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251720|ref|YP_002147735.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197263335|ref|ZP_03163409.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200387219|ref|ZP_03213831.1| gutQ protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204928269|ref|ZP_03219469.1| gutQ protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|213051946|ref|ZP_03344824.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426132|ref|ZP_03358882.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213621916|ref|ZP_03374699.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648107|ref|ZP_03378160.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852360|ref|ZP_03381892.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|238909605|ref|ZP_04653442.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|25303285|pir||AB0845 probable phosphosugar binding protein STY2960 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503916|emb|CAD05945.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138732|gb|AAO70301.1| putative phosphosugar-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161365102|gb|ABX68870.1| hypothetical protein SPAB_03529 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408781|gb|ACF69000.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194711023|gb|ACF90244.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197215423|gb|ACH52820.1| gutQ protein [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197241590|gb|EDY24210.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290765|gb|EDY30119.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199604317|gb|EDZ02862.1| gutQ protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204322591|gb|EDZ07788.1| gutQ protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205338210|gb|EDZ24974.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|322614343|gb|EFY11274.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621592|gb|EFY18445.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624453|gb|EFY21286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628784|gb|EFY25567.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633489|gb|EFY30231.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635935|gb|EFY32643.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639643|gb|EFY36328.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646826|gb|EFY43329.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650594|gb|EFY46999.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654794|gb|EFY51113.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659014|gb|EFY55267.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664419|gb|EFY60613.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668332|gb|EFY64489.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673688|gb|EFY69789.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677749|gb|EFY73812.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681421|gb|EFY77453.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322683823|gb|EFY79833.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193788|gb|EFZ78991.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200258|gb|EFZ85340.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203239|gb|EFZ88268.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205514|gb|EFZ90479.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212802|gb|EFZ97613.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216328|gb|EGA01055.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221076|gb|EGA05507.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226897|gb|EGA11079.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230819|gb|EGA14937.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234830|gb|EGA18916.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238869|gb|EGA22919.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241569|gb|EGA25600.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248284|gb|EGA32220.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251132|gb|EGA35005.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323263150|gb|EGA46688.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264345|gb|EGA47851.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271172|gb|EGA54600.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 321

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|251770943|gb|EES51528.1| Sugar isomerase, KpsF/GutQ family protein [Leptospirillum
           ferrodiazotrophum]
          Length = 333

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/297 (38%), Positives = 169/297 (56%), Gaps = 7/297 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV  I    G++ +TGIGKSGHI  K+++T +STGTP+FF+H  EA HGDLGM+  
Sbjct: 37  SFAEAVGAILDNPGKLAVTGIGKSGHIARKVSATFSSTGTPAFFLHPGEALHGDLGMLES 96

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++  S SG ++E+ A+L    R  +P+IAI     S +A  A   L+     ES P 
Sbjct: 97  RDILLAFSKSGETEEILALLPLLGRMEVPVIAIVGNKASTIAKKATWALSAEVSHESGPL 156

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           G+APT+S    LA+GDALA+ +L  R+F   DF  LHPGG LG   F+    +MH+GD I
Sbjct: 157 GIAPTSSTTAMLAMGDALAMTVLSERDFGIPDFASLHPGGSLGRRYFLQIGALMHTGDRI 216

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------LS 284
           P V    PL + I  ++ K+ G   V+D    L GI+T+GD+ R   +  ++      + 
Sbjct: 217 PRVAPETPLREVIVEMTAKKLGMTTVLDAKGALMGILTDGDLRRALDRRGSSAPSILDIP 276

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VM   P  +   TL + A+ L+    I+ ++VV   +   G++H  DLLR G++
Sbjct: 277 AQTVMTTTPVTLDPSTLASDALTLMESRQITSVVVVHPDRTVAGVLHIHDLLRAGVL 333


>gi|86149299|ref|ZP_01067530.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596573|ref|ZP_01099810.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218563047|ref|YP_002344826.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840081|gb|EAQ57339.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191414|gb|EAQ95386.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360753|emb|CAL35552.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315927387|gb|EFV06725.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni DFVF1099]
 gi|315929842|gb|EFV09006.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 315

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/292 (39%), Positives = 175/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+ AV  +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LATNLDENFNQAVNLMLNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +    DI L +  
Sbjct: 81  DLGMLTSEDVLIAISNSGETEEILKIIPAIKKREIPLIVMCGKKNSTLVKQGDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A  ++ +H I  ++V  + +K +GI+  
Sbjct: 259 FDFKAKEIMSINPKVVDADAMASEAEGIMLKHKIKEIIVGKE-EKVVGIIQL 309


>gi|313204155|ref|YP_004042812.1| kpsf/gutq family protein [Paludibacter propionicigenes WB4]
 gi|312443471|gb|ADQ79827.1| KpsF/GutQ family protein [Paludibacter propionicigenes WB4]
          Length = 320

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/299 (40%), Positives = 178/299 (59%), Gaps = 5/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L  ++  + + AVE+I A KG++VI G+GK+G IG K+AS+LASTGT S F++AAEA HG
Sbjct: 21  LADKIGPEINQAVEQIYACKGKLVIMGVGKTGIIGHKIASSLASTGTSSIFINAAEAMHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI  +D+++++S SG+S E+  ++   +     L+A+T   +S +A    +VL +  
Sbjct: 81  DLGMINSNDIVMLISNSGNSAEILNVVAPLKEIGCSLMAMTGNPRSALAKEVSLVLNVGI 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDV 223
             E+CP GLAPTTS    L +GDAL I L+E R F   +F + HPGG LG   +    D 
Sbjct: 141 SKEACPLGLAPTTSTTATLVMGDALTICLMERRGFKAENFALYHPGGALGRRLISRVKDE 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           M +   IP V       D I  +S KR G   V ++ ++  GIIT+GDI R   K  +L 
Sbjct: 201 MFT--DIPKVHETTIFKDIIYEVSNKRLGMTMVYNDAEQAVGIITDGDIRRAIQKFDELK 258

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+  ++M  + K I  D LLT A++L+  + I+ L VVD   + IGI+   +++ F I
Sbjct: 259 NLTAAEIMTHSFKRITPDELLTEALELMDINKITTLTVVDASDQVIGILSIHNIIDFRI 317


>gi|153951764|ref|YP_001398733.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939210|gb|ABS43951.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 315

 Score =  204 bits (520), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/292 (39%), Positives = 175/292 (59%), Gaps = 7/292 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F  AV  I   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HG
Sbjct: 21  LAKNLDENFSQAVNLILNTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+T +D++I +S SG ++E+  I+   ++  IPLI +  +  S +   +DI L +  
Sbjct: 81  DLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPLIVMCGKENSTLVKQSDIFLNIAV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+
Sbjct: 141 EKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDL 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDL 280
           M S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K  
Sbjct: 201 MVSSN-LPIVHPDTEFNDLVNVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKASDKPR 258

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++M  NPKV+  D + + A +++ ++ I  ++V  +  + +GI+  
Sbjct: 259 FDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKEIIVGKEA-RVVGIIQL 309


>gi|291276276|ref|YP_003516048.1| KpsF protein [Helicobacter mustelae 12198]
 gi|290963470|emb|CBG39300.1| KpsF protein [Helicobacter mustelae 12198]
          Length = 322

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/320 (37%), Positives = 194/320 (60%), Gaps = 11/320 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A + +  E + L S++++        F   V+ I  + G++++TG+GKSG IG+K+A+
Sbjct: 8   QIAKKVLDDEAQELLSIDTT-----RIDFPHIVKTILQMSGKLIVTGVGKSGLIGAKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  +A HGDLGMI ++D+I+ +S+SG SDEL +IL + +  S  +I +
Sbjct: 63  TLASTGTPSFFIHPTDAMHGDLGMIGKEDVILAISYSGESDELISILPHLKHQSHAIITM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + + +S ++   D  + +    E+CP   APT+S  + LA+GDALA+ L+ +R+FS+ DF
Sbjct: 123 SKDAQSSLSKMGDFFIPIAVSKEACPINAAPTSSTTLTLALGDALAVCLMHARDFSKQDF 182

Query: 205 YVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG  LFV   D+M +  ++PL+    PL +AI  +SE R G  A++ E  +L
Sbjct: 183 AYFHPGGSLGKRLFVKVKDLMQT-QNLPLIPPEMPLKEAIIKMSESRLGS-AILIEDDRL 240

Query: 264 KGIITEGDIFRN-FHKDLNTLS-VEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVV 320
            G++++GD+ R    KD N  S  +     +PK      LL   A++ + ++ I +L++ 
Sbjct: 241 YGVLSDGDLRRAMMQKDFNLESPAKHYATLSPKYCDNPLLLACEALEFIEENKIQLLIIT 300

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D  +  +G +H   L+  GI
Sbjct: 301 DPAKHILGAIHLHTLISAGI 320


>gi|300727171|ref|ZP_07060589.1| carbohydrate isomerase, KpsF/GutQ family [Prevotella bryantii B14]
 gi|299775557|gb|EFI72149.1| carbohydrate isomerase, KpsF/GutQ family [Prevotella bryantii B14]
          Length = 329

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 111/288 (38%), Positives = 185/288 (64%), Gaps = 8/288 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           ++  +F  AVE +    G++++TG+GKSG++G+K+A+TLASTGTP+FF++  +  HGDLG
Sbjct: 38  QMDDEFVKAVEMMYHCNGKIIVTGVGKSGNVGAKIAATLASTGTPAFFINPLDVYHGDLG 97

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++T DD+++ LS SG +DEL   +      +IP+I++T    S++A +++  + +  E E
Sbjct: 98  VMTADDVVLALSNSGQTDELLRFIPMVLHMNIPIISMTGNKNSLLAKYSNAHIMVHVERE 157

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S    LA+GDALAIAL+E RNF   DF   HPGG+LG  L   A DVM +
Sbjct: 158 ACPLNLAPTSSTTAALAMGDALAIALMEVRNFKPRDFAQFHPGGELGKRLLTTAGDVMKT 217

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGC-VAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
            D++P++     L +AI  +S+ + G  V++V++  K+ GIIT+GDI R    +  +   
Sbjct: 218 -DNLPIIPQDMHLGEAIIKVSKGQLGLGVSLVND--KIAGIITDGDIRRAMERWQAEFFD 274

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +V ++M  +PK +   T ++   +++++H I  ++V D  +  +GIV
Sbjct: 275 HTVNEIMTIHPKQVYTSTKISEVQRIMQEHRIHTVLVTDKEKHLLGIV 322


>gi|198244302|ref|YP_002216809.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205353782|ref|YP_002227583.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858102|ref|YP_002244753.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197938818|gb|ACH76151.1| gutQ protein [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|205273563|emb|CAR38550.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206709905|emb|CAR34258.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326628890|gb|EGE35233.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 321

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPLSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|224584616|ref|YP_002638414.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469143|gb|ACN46973.1| putative phosphosugar-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 308

 Score =  204 bits (519), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   ++++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESREVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L IGDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMIGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 188 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|283835563|ref|ZP_06355304.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291068773|gb|EFE06882.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 321

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAP 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALAIA++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMRLAPTSSTVNTLMMGDALAIAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVTLTTSVMDAMLELSRTGLGLVAVCDEQSLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTQVSEAMTHNGITLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|326624568|gb|EGE30913.1| gutQ protein [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 308

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPLSPLGRAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 188 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|16421383|gb|AAL21718.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
          Length = 308

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 188 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|39546349|ref|NP_461759.2| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56414790|ref|YP_151865.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|168230896|ref|ZP_02655954.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168820476|ref|ZP_02832476.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194442564|ref|YP_002042079.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194472707|ref|ZP_03078691.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197363718|ref|YP_002143355.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56129047|gb|AAV78553.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194401227|gb|ACF61449.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194459071|gb|EDX47910.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197095195|emb|CAR60746.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205334552|gb|EDZ21316.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205342952|gb|EDZ29716.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|312913856|dbj|BAJ37830.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087241|emb|CBY97006.1| Uncharacterized phosphosugar isomerase aq_1546 [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223391|gb|EFX48457.1| Glucitol operon GutQ protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 321

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|157148245|ref|YP_001455564.1| D-arabinose 5-phosphate isomerase [Citrobacter koseri ATCC BAA-895]
 gi|157085450|gb|ABV15128.1| hypothetical protein CKO_04062 [Citrobacter koseri ATCC BAA-895]
          Length = 321

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/302 (40%), Positives = 177/302 (58%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANTILHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSITLLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            +M   D++P V++   ++DA+  LS    G VAV D  + +KG+ T+GD+ R +     
Sbjct: 201 HLMRRDDAVPQVQLTTSVMDAMLELSRTGLGLVAVCDAQRVVKGVFTDGDL-RRWLVGGG 259

Query: 282 TLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           TL+  V + M  N   + E +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 260 TLATPVSEAMTHNGITLQEQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 319

Query: 340 II 341
           II
Sbjct: 320 II 321


>gi|261247974|emb|CBG25807.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|332989710|gb|AEF08693.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 308

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 188 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVSEAMTPNGITLQAKSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|167994139|ref|ZP_02575231.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205327945|gb|EDZ14709.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|267994958|gb|ACY89843.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159398|emb|CBW18916.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323131189|gb|ADX18619.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 321

 Score =  204 bits (518), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R       
Sbjct: 201 HLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVSEAMTPNGITLQAKSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|56476147|ref|YP_157736.1| hypothetical protein ebA1315 [Aromatoleum aromaticum EbN1]
 gi|56312190|emb|CAI06835.1| conserved hypothetical protein,KpsF/GutQ family [Aromatoleum
           aromaticum EbN1]
          Length = 376

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/297 (43%), Positives = 177/297 (59%), Gaps = 3/297 (1%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  AV+ I   +GRV++TGIGKSGHI  KLA+TLASTGTP++FVHAAEA+HGDLG
Sbjct: 80  RLGADFERAVQLILQRRGRVIVTGIGKSGHIARKLAATLASTGTPAYFVHAAEAAHGDLG 139

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MIT +D++I LS SG+S+EL  I+   +R    LI++T +  S +A  AD+ L      E
Sbjct: 140 MITAEDVVIALSNSGASEELLTIVPLVKRQGAKLISMTGKPDSPLAREADVHLDAAVSEE 199

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT S    LA+GDALA+ALL++R F  +DF   HPGG LG  L    SDVM  
Sbjct: 200 ACPLNLAPTASTTAALALGDALAVALLDARGFGADDFARSHPGGSLGRRLLTHVSDVMRG 259

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
            D +P V    P+  A+  ++    G  AVVD      GI T+GD+ R   +  D  T +
Sbjct: 260 ADRVPQVPETVPMTSALLEMTRGGMGMTAVVDARGAPIGIFTDGDLRRALERGCDARTAA 319

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + +VM + P+ I  D L   A +++ +  IS L+VVD      G +   DL+   +I
Sbjct: 320 LAEVMTRAPRSIDPDALAVEAAEIMERLRISQLLVVDADGTLAGALTTHDLMLAKVI 376


>gi|297172130|gb|ADI23111.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured gamma proteobacterium HF0770_09E07]
          Length = 321

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/294 (38%), Positives = 178/294 (60%), Gaps = 5/294 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
           F      EKI   KG++ +TG+GKSGHI +K+++TL+STGTPSFF+H AEA HGDLGMI 
Sbjct: 30  FNVEELCEKIYNCKGKIFLTGVGKSGHIANKISATLSSTGTPSFFIHPAEALHGDLGMIE 89

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           + D I+ +S SG S E+  ++   +   IPL +IT   KS +AC ++  + +    E+CP
Sbjct: 90  KRDAILAISKSGESKEICDLIPAIKLRKIPLYSITENEKSTIACSSEAHILVKVAREACP 149

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDS 229
           + LAPT+S  + LA+GDA+AI+LL+++ F+  DF   HPGGKLG  L +   DVM     
Sbjct: 150 NDLAPTSSTTVTLALGDAIAISLLKAKGFTSEDFAKSHPGGKLGKKLTLKVRDVMIPISK 209

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVED 287
             +VK    L D I  +S K+ G +A++ +  K+ G+ ++GD+ R   K  D+    V  
Sbjct: 210 AAIVKENSSLKDLIYEVSSKKQG-IALIKKSNKITGVFSDGDLRRQLQKNVDIQKTKVGS 268

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           VM K  K I  + L++ A + ++++ +  L +V++    +GI+   D+L   ++
Sbjct: 269 VMKKKFKTIKNEELISEAAKRMKRYKVYNL-IVEEKNNIVGILTMHDILEANVL 321


>gi|57168982|ref|ZP_00368111.1| KpsF protein Cj1443c [Campylobacter coli RM2228]
 gi|57019648|gb|EAL56337.1| KpsF protein Cj1443c [Campylobacter coli RM2228]
          Length = 280

 Score =  203 bits (517), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/273 (41%), Positives = 169/273 (61%), Gaps = 7/273 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HGDLGM+T DD++I +S SG 
Sbjct: 5   KGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDVLIAISNSGE 64

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++E+  I+   ++  IPLIA+  +  S +    DI L +  + E+CP  LAP +S    L
Sbjct: 65  TEEILKIIPAIKKRKIPLIAMCGKKNSTLVKQGDIFLNISVKEEACPLQLAPMSSTTATL 124

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDALA AL+++RNF  +DF + HPGG LG  L    SD+M S  ++P+V       D 
Sbjct: 125 VMGDALAAALMKARNFRPDDFALFHPGGSLGRKLLTRVSDLMVS-KNLPIVHPDTEFNDL 183

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILED 299
           + +++  + G   VV E +KL GIIT+GD+ R      K       +++M  NPKV+  D
Sbjct: 184 VDVMTSGKLGLCLVV-ENEKLVGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDAD 242

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + A +++ ++ I  + VV    K +GI+  
Sbjct: 243 AMASEAEEIMLKYKIKEI-VVSKEDKVVGIIQL 274


>gi|288800039|ref|ZP_06405498.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333287|gb|EFC71766.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 324

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/319 (35%), Positives = 192/319 (60%), Gaps = 15/319 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++ + +QC      A  + +  L  +    +   +HC        KG+V++TG+GKSG+I
Sbjct: 12  IRENAIQCLKDEAEALLQLIPQLNENFDKAIQMMYHC--------KGKVIVTGVGKSGNI 63

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TL+STGTPSFF++  +  HGDLG++T DD+++ LS SG +DEL   L    + +
Sbjct: 64  GAKIAATLSSTGTPSFFINPLDVFHGDLGVMTPDDVVLALSNSGQTDELLRFLPMVLQMN 123

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+I+++S  +S++A ++   + +  E E+CP  LAPT+S    LA+GDA+A+AL++ R+
Sbjct: 124 VPIISMSSNPQSLLAKYSTAHIQVKVEKEACPLNLAPTSSTTAALAMGDAIAVALMKVRD 183

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG+LG  L   A+DVM   D +P++     L +AI  +S+ + G + V 
Sbjct: 184 FKPKDFAQFHPGGELGKRLLTTAADVMRKND-LPVIPKEMNLGEAIIHVSKGKLG-LGVS 241

Query: 258 DEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E +++ G+IT+GDI R    +        V D+M   PK +  +T L+  ++++ ++ I
Sbjct: 242 IEDEQVIGLITDGDIRRAMETWKAQFFDKKVADIMTTTPKSVAPETKLSEILRIMNKYKI 301

Query: 315 SVLMVVDDCQKAIGIV-HF 332
             ++VVD     +GIV H+
Sbjct: 302 HTVLVVDSSNHLLGIVDHY 320


>gi|161950056|ref|YP_404426.2| D-arabinose 5-phosphate isomerase [Shigella dysenteriae Sd197]
 gi|309786211|ref|ZP_07680839.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
 gi|308925956|gb|EFP71435.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
          Length = 321

 Score =  203 bits (517), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFFRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+I+ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVILFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARFHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|170765600|ref|ZP_02900411.1| gutQ protein [Escherichia albertii TW07627]
 gi|170124746|gb|EDS93677.1| gutQ protein [Escherichia albertii TW07627]
          Length = 321

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSITLLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M S D+IP V +   ++DA+  LS    G VAV D+ Q +KG+ T+GD+ R       
Sbjct: 201 HLMRSDDAIPQVALNASVMDAMLELSRTGLGLVAVCDDQQLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|257468655|ref|ZP_05632749.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
 gi|317062912|ref|ZP_07927397.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688588|gb|EFS25423.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
          Length = 324

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/285 (41%), Positives = 175/285 (61%), Gaps = 7/285 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   +G+VV+TGIGKSG IG K+A+TLASTGT S F+++AE  HGDLGMI+++D++I
Sbjct: 37  VEEILKSEGKVVVTGIGKSGLIGKKIAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S SG+SDE+ AIL   ++    ++A+T    S +   AD +L +  + E CP  LAP 
Sbjct: 97  AISNSGNSDEIVAILPSIKKIGAKIVAMTGNRNSKLGREADYILNIGVKREGCPLNLAPM 156

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKI 235
           +S    L +GDALA  L++ R+F   +F + HPGG LG  L +   DVMH  + IPL   
Sbjct: 157 SSTTSTLVMGDALAAILIKKRDFKPENFALYHPGGSLGKRLLMKVRDVMHKDEMIPLCDK 216

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNP 293
              + D I  +++KR G V V++ G  + GIITEGDI R   +  +      +D+M +N 
Sbjct: 217 ESVIDDVILTMTDKRLGAVCVMN-GDLMVGIITEGDIRRALKRREEFFGFKAKDIMTRNF 275

Query: 294 KVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  D++   A++L+  R+  ISVL V D   K +G+V   DLL
Sbjct: 276 TKVDSDSMAIDALELMENRESQISVLPVFDK-DKLVGMVRVHDLL 319


>gi|81242225|gb|ABB62935.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 308

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFFRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+I+ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVILFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARFHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|327313442|ref|YP_004328879.1| arabinose 5-phosphate isomerase [Prevotella denticola F0289]
 gi|326945932|gb|AEA21817.1| arabinose 5-phosphate isomerase [Prevotella denticola F0289]
          Length = 323

 Score =  203 bits (516), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 186/311 (59%), Gaps = 14/311 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +QC      A    ++ L+ +    +S  +HC         G+V++TG+GKSG+IG+K+A
Sbjct: 16  IQCIKEETDAAFNLINQLDENFDRAVSLMYHCT--------GKVIVTGVGKSGNIGAKIA 67

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +       IP+I 
Sbjct: 68  ATLSSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMDIPIIG 127

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +++  +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  R+F   D
Sbjct: 128 MSANPQSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRDFKPQD 187

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG+LG  L   A DVM S D +P++     L +AI  +S+ + G    + +G K
Sbjct: 188 FAQFHPGGELGKRLLTTAQDVMRS-DDLPVIPEKMHLGEAIIHVSKGKLGLGVSLSDG-K 245

Query: 263 LKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + G+IT+GDI R    +  +    +V D+M + PK++L  T +T   +++ Q+ I  ++V
Sbjct: 246 VVGLITDGDIRRAMERWQAEFFDHTVSDIMTREPKMVLPATKITEIQRIMHQNKIHTVLV 305

Query: 320 VDDCQKAIGIV 330
            D  +  +G+V
Sbjct: 306 CDAERHLLGVV 316


>gi|317486881|ref|ZP_07945692.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
 gi|316921871|gb|EFV43146.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
          Length = 341

 Score =  203 bits (516), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/280 (40%), Positives = 171/280 (61%), Gaps = 4/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRVV+TGIGKSG +G KLA+T +STGTP+FF+H  E +HGDLG + +DD+II +S SG +
Sbjct: 58  GRVVVTGIGKSGLVGRKLAATFSSTGTPAFFLHPVEGAHGDLGSLRKDDVIIAISNSGET 117

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL AIL   +     LIA+T    S +   AD+ L      E+CPHGLAPT S    LA
Sbjct: 118 AELNAILPALKSLGTSLIAMTGREDSTLGRLADVTLHSGVPREACPHGLAPTASTTAVLA 177

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ L++ ++F+E DF   HPGG LG  L +  S+VM + + +P +     L +A+
Sbjct: 178 LGDALAVCLMQLKSFTEKDFLRYHPGGSLGQRLKLNVSEVMRT-EGLPQLSETSLLSEAL 236

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLS-VEDVMIKNPKVILEDTL 301
             L + + G V ++D   ++ GI+T+GD+ R   +  LN  + V  VM  +P+   +   
Sbjct: 237 RQLDQGKLGAVLLLDNEHRISGILTDGDVRRAVCRGTLNPEAPVSTVMTPSPRCGTQSDT 296

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +   ++L+    I+VL + D+ ++ +G+VH  DLL  G +
Sbjct: 297 VATLLELMESKAITVLPIADEERRLLGMVHMHDLLGQGSV 336


>gi|158335348|ref|YP_001516520.1| KpsF/GutQ family sugar isomerase [Acaryochloris marina MBIC11017]
 gi|158305589|gb|ABW27206.1| sugar isomerase, KpsF/GutQ family [Acaryochloris marina MBIC11017]
          Length = 334

 Score =  202 bits (515), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 117/318 (36%), Positives = 181/318 (56%), Gaps = 10/318 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ E   ++     LQ E   Q + AV+ +    G+VV++G+GKSG +  K+A+TL S G
Sbjct: 20  LLLEAEAIAKAADRLQPE---QVNQAVDLMINCSGKVVLSGVGKSGIVARKIAATLTSVG 76

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             + F+H  EA HGDLG++   D+++VLS SG +DEL A+L   ++  +PLIA+     S
Sbjct: 77  VMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIALVGNVNS 136

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD+VL    + E+CP  LAPT S  + +AIGDALA+ +  ++  +   F V HP 
Sbjct: 137 TLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVTHAKGVTPEAFAVNHPA 196

Query: 211 GKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G+LG  L +  SD+MH G   P +      ++ +T +S+   G V VV+  Q+L GI+T+
Sbjct: 197 GRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGAVNVVNAQQQLLGIVTD 256

Query: 270 GDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDC 323
           GD+ R   K    DL  +  E +M  NP     D L   A+Q++  R   ISVL VVD  
Sbjct: 257 GDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVMEDRPSQISVLPVVDPD 316

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G++   D+ + G+I
Sbjct: 317 DRCVGVLRLHDIAQAGLI 334


>gi|260591674|ref|ZP_05857132.1| arabinose 5-phosphate isomerase [Prevotella veroralis F0319]
 gi|260536474|gb|EEX19091.1| arabinose 5-phosphate isomerase [Prevotella veroralis F0319]
          Length = 323

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 188/316 (59%), Gaps = 14/316 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +K+  +QC      A    ++ L+ + +  +   +HC         G+V++TG+GKSG+I
Sbjct: 11  VKDYAIQCIKEEADATINLINQLDDNFEKAVDLMYHCT--------GKVIVTGVGKSGNI 62

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TL+STGTP+FFV+  +  HGDLG++  DD+++ LS SG +DEL   +      +
Sbjct: 63  GAKIAATLSSTGTPAFFVNPLDVYHGDLGVMKEDDVVLALSNSGQTDELLRFIPMVLHMN 122

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I +++   S++A ++   L +  E E+CP  LAPT S    L +GDALA+AL+  R+
Sbjct: 123 IPIIGMSANPHSLLAKYSTAHLKVWVEKEACPLNLAPTCSTTAALVMGDALAVALMRVRD 182

Query: 199 FSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG+LG  L   A DVM S +++P++     L +AI  +S+ + G + + 
Sbjct: 183 FRPQDFAQFHPGGELGKRLLTTAQDVMIS-ENLPIIPKEMHLGEAIIHVSKGKLG-LGIA 240

Query: 258 DEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             G+K+ G+IT+GDI R    +  +    +V D+M   PK++L +  +T   Q++ +H +
Sbjct: 241 LSGKKIAGLITDGDIRRAMERWQAEFFNHTVNDIMTTEPKMVLPNIKITEIQQIMHRHKV 300

Query: 315 SVLMVVDDCQKAIGIV 330
             ++V D+ +  +G+V
Sbjct: 301 HTVLVCDEEKNLLGVV 316


>gi|331654185|ref|ZP_08355185.1| protein GutQ [Escherichia coli M718]
 gi|331047567|gb|EGI19644.1| protein GutQ [Escherichia coli M718]
          Length = 321

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K +G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|218547784|ref|YP_002381575.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|218355325|emb|CAQ87932.1| putative phosphosugar-binding protein [Escherichia fergusonii ATCC
           35469]
          Length = 321

 Score =  202 bits (515), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 174/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKLTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +L  +    A ++L +  I+   VVD+  K +G ++  D  + GI
Sbjct: 261 LTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|325856615|ref|ZP_08172253.1| arabinose 5-phosphate isomerase [Prevotella denticola CRIS 18C-A]
 gi|325483329|gb|EGC86304.1| arabinose 5-phosphate isomerase [Prevotella denticola CRIS 18C-A]
          Length = 323

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 113/311 (36%), Positives = 185/311 (59%), Gaps = 14/311 (4%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +QC      A    +  L+ +    +S  +HC         G+V++TG+GKSG+IG+K+A
Sbjct: 16  IQCIKEETDAAFNLIKQLDENFDRAVSLMYHCT--------GKVIVTGVGKSGNIGAKIA 67

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +       IP+I 
Sbjct: 68  ATLSSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMDIPIIG 127

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +++  +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  R+F   D
Sbjct: 128 MSANPQSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRDFKPQD 187

Query: 204 FYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG+LG  L   A DVM S D +P++     L +AI  +S+ + G    + +G K
Sbjct: 188 FAQFHPGGELGKRLLTTAQDVMRS-DDLPVIPEKMHLGEAIIHVSKGKLGLGVSLSDG-K 245

Query: 263 LKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + G+IT+GDI R    +  +    +V D+M + PK++L  T +T   +++ Q+ I  ++V
Sbjct: 246 VVGLITDGDIRRAMERWQAEFFDHTVSDIMTREPKMVLPATKITEIQRIMHQNKIHTVLV 305

Query: 320 VDDCQKAIGIV 330
            D  +  +G+V
Sbjct: 306 CDVERHLLGVV 316


>gi|294083597|ref|YP_003550354.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663169|gb|ADE38270.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 313

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 171/295 (57%), Gaps = 5/295 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L+  L   F  AV+ +    G VV+ G+GKSG +G K+A+TLASTGTPS F+H AEA 
Sbjct: 21  TRLEQGLGTGFSAAVDMMLNTAGHVVVCGMGKSGLVGRKIAATLASTGTPSLFLHPAEAI 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+ R D+++++S SG ++E+  +L   +R    +IA TS   S +A  A+I L +
Sbjct: 81  HGDLGMVRRGDVVLLMSHSGETEEIIRLLPALKRLETRIIAFTSNANSTMAREAEIALDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             + E+CP  LAPTTS++  L +GDALA+AL+E R F   DF   HPGG LG  L     
Sbjct: 141 SVDREACPLNLAPTTSSLNTLVLGDALAVALMEKRGFEAADFAATHPGGALGRRLLTHVR 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
           D M   D++P V     + DA+  ++E R G + +V   +KL GI+T+GD+ R      D
Sbjct: 201 DRMRV-DNLPFVDADSSVQDALMTMTEGRLG-LTLVGTPEKLDGILTDGDLRRLLVSGAD 258

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           L    V DV   +P  I  D ++  A + + +  I  L+V DD    +GI+   +
Sbjct: 259 LAGARVGDVASADPLSIAPDAMMNEAEEKMLEARIQCLVVKDDQAVVVGILQIFE 313


>gi|261342148|ref|ZP_05970006.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315480|gb|EFC54418.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
          Length = 321

 Score =  202 bits (514), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/301 (39%), Positives = 175/301 (58%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   +   +G+V++ GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGEDFVRAANTLIQCEGKVIVAGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SGS+ EL  I+   +  S+ L+A+T + +S +A  A   L +
Sbjct: 81  HGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKSVALLAMTGKPRSPLALAAKATLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            +M + ++ P V +   ++DA+  LS    G VAV D+G  +KG+ T+GD+ R       
Sbjct: 201 HLMRTDEATPQVTLDTSVMDAMLELSRTGLGLVAVCDDGGFVKGVFTDGDLRRWLVGGGK 260

Query: 282 TLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             S V D M      +  ++    A ++L +  I+   VVDD  +  G ++  D  + GI
Sbjct: 261 LESQVSDAMTTGGLTLNAESRAIEAKEVLMKRKITAAPVVDDSGRLCGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|255037354|ref|YP_003087975.1| KpsF/GutQ family protein [Dyadobacter fermentans DSM 18053]
 gi|254950110|gb|ACT94810.1| KpsF/GutQ family protein [Dyadobacter fermentans DSM 18053]
          Length = 324

 Score =  202 bits (514), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/295 (39%), Positives = 180/295 (61%), Gaps = 7/295 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F   V  I    GRVVI+G+GKS  +G K+ +TL STGTP+ F+HAA+A HGDLGMI  
Sbjct: 32  EFEKCVYAILHSGGRVVISGVGKSAIVGQKIVATLNSTGTPALFMHAADAIHGDLGMIQD 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D++IV+S SG + E+K ++   +R  + +IA+ S   S +A +  + L      E+ P 
Sbjct: 92  NDVVIVISKSGDTPEIKVLVPLLKRTGVKMIAMVSNKDSYLAKNCILTLHAHAPAEADPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAPTTS  + +A+GDALAI LLE+R F+ +DF   HPGG LG  L++   D+ +  +++
Sbjct: 152 NLAPTTSTSVTMALGDALAICLLEARGFTHDDFARYHPGGSLGKRLYLKVCDI-YPHNAL 210

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVE 286
           P V     L + I  ++ KR G  AVV E  ++ GIIT+GD+ R         L  L  +
Sbjct: 211 PTVSEQATLQEVILEMTSKRLGATAVVSENGQMAGIITDGDLRRMLKTYGAAGLLDLHAK 270

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           D+M K+P  +  D     A+++++  +I+ ++VV++  KA+G VH  DLLR G++
Sbjct: 271 DIMTKSPITVSPDEYAVNALEVMQSKSITQVVVVEEG-KALGFVHLHDLLREGLV 324


>gi|310779336|ref|YP_003967669.1| KpsF/GutQ family protein [Ilyobacter polytropus DSM 2926]
 gi|309748659|gb|ADO83321.1| KpsF/GutQ family protein [Ilyobacter polytropus DSM 2926]
          Length = 319

 Score =  202 bits (513), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/298 (40%), Positives = 181/298 (60%), Gaps = 7/298 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++  +S Q   AV  I A KG+VVITGIGKSG IG K+A+T ASTGT S F+++AE  HG
Sbjct: 21  VRDRISDQMEKAVNIILASKGKVVITGIGKSGLIGKKMAATFASTGTHSVFMNSAEGLHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI  +D++I +S SG+SDE+ +I+   ++    +IA+T    S +   +D +L +  
Sbjct: 81  DLGMIHPEDVVIAISNSGNSDEVLSIIPSIKKIGAKIIAMTGNPGSGLGQASDCILDIRV 140

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           E E+CP+ LAPTTS    L +GDA+A  L++ R+F   +F V HPGG LG  L +   DV
Sbjct: 141 EREACPNNLAPTTSTTATLVMGDAMASVLIKLRDFKPENFAVYHPGGSLGRRLLMKVEDV 200

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-- 281
           MH G+ + +      + + +  ++ KR G V VVD G ++ GIITEGDI R   +     
Sbjct: 201 MHKGNEVAVCDSRATVDEVLLKMTNKRLGAVCVVDNG-RMSGIITEGDIRRALQEKNKFF 259

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                D+M K    I +D +   A++L+  R++ ISVL V+ + ++ +G+V   DLL+
Sbjct: 260 DFYAGDIMTKKFTYINKDKMAIDALELMENRENQISVLPVM-EGEELVGLVRVHDLLK 316


>gi|323966853|gb|EGB62282.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli M863]
 gi|323978684|gb|EGB73766.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
 gi|327251427|gb|EGE63113.1| arabinose 5-phosphate isomerase [Escherichia coli STEC_7v]
          Length = 321

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 121/301 (40%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +L  +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|269792890|ref|YP_003317794.1| KpsF/GutQ family protein [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100525|gb|ACZ19512.1| KpsF/GutQ family protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 334

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 125/321 (38%), Positives = 186/321 (57%), Gaps = 9/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++  L+ I  E R L    S     +  +   A   + +  GRVV+ G+GKSG IG K+A
Sbjct: 18  LEVGLQVIRQEARALEDGAS----RMGLELVRAARMVASCSGRVVVCGLGKSGLIGRKIA 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLAS G P+FF+HAAE SHGDLGM+ RDD+ + LS SG++ E+  ++ + RR   P+IA
Sbjct: 74  ATLASLGCPAFFLHAAEGSHGDLGMVCRDDVGLFLSNSGTTREVLEMVPFFRRIGCPVIA 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +   AD+VL      E+ P G+APT+S  +QLA+GDALA  +         D
Sbjct: 134 LTGRRDSPLGLSADVVLDCSVGREADPLGIAPTSSTTLQLAVGDALAGMVTRLLGLRVED 193

Query: 204 FYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G     L +   DVM  GD +P V     + +A+  +++K +G VAV     +
Sbjct: 194 FALFHPGGALGRRLLLRLEDVMAVGDRVPRVSRDASVKEALFAITDKGYGAVAVEGPSGE 253

Query: 263 LKGIITEGDIFRNFHKD-LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L GI T+GD+ R   ++ + +L   V +VM +NPKV+  D L   A++L+ +  ISV++V
Sbjct: 254 LVGIFTDGDLRRLMEREGVGSLERPVGEVMTRNPKVMGRDKLAAEALKLMEEMEISVVLV 313

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD   +  GIVH  DLL+ G+
Sbjct: 314 VDGA-RVEGIVHLHDLLKAGV 333


>gi|253582905|ref|ZP_04860123.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           varium ATCC 27725]
 gi|251835111|gb|EES63654.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           varium ATCC 27725]
          Length = 324

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/285 (41%), Positives = 175/285 (61%), Gaps = 7/285 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   +G+VV+TGIGKSG IG K+A+TLASTGT S F+++AE  HGDLGMI+++D++I
Sbjct: 37  VEEILKSEGKVVVTGIGKSGLIGKKIAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S SG+SDE+ AIL   ++    ++A+T    S +   AD +L +  + E CP  LAP 
Sbjct: 97  AISNSGNSDEIVAILPSIKKIGAKIVAMTGNRNSKLGREADYILNIGVKREGCPLNLAPM 156

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKI 235
           +S    L +GDALA  L++ R+F   +F + HPGG LG  L +   DVMH  D +PL   
Sbjct: 157 SSTTSTLVMGDALAAILIKKRDFKPENFALYHPGGSLGKRLLMKVRDVMHKEDMLPLCDK 216

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNP 293
              + D I  +++KR G V V++ G  + GIITEGDI R   +  +      +D+M +N 
Sbjct: 217 ESIIDDVILTMTDKRLGAVCVMN-GDLMVGIITEGDIRRALKRREEFFGFKAKDIMTRNF 275

Query: 294 KVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  +++   A++L+  R+  ISVL V D   K +G+V   DLL
Sbjct: 276 TKVDSESMAIDALELMENRESQISVLPVFDK-DKLVGMVRVHDLL 319


>gi|157158310|ref|YP_001464016.1| D-arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|191167097|ref|ZP_03028918.1| gutQ protein [Escherichia coli B7A]
 gi|193065010|ref|ZP_03046085.1| gutQ protein [Escherichia coli E22]
 gi|194427887|ref|ZP_03060433.1| gutQ protein [Escherichia coli B171]
 gi|260845350|ref|YP_003223128.1| putative phosphosugar-binding protein [Escherichia coli O103:H2
           str. 12009]
 gi|300924244|ref|ZP_07140230.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           182-1]
 gi|301326267|ref|ZP_07219643.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|309795167|ref|ZP_07689586.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           145-7]
 gi|157080340|gb|ABV20048.1| gutQ protein [Escherichia coli E24377A]
 gi|190902879|gb|EDV62607.1| gutQ protein [Escherichia coli B7A]
 gi|192927307|gb|EDV81926.1| gutQ protein [Escherichia coli E22]
 gi|194414120|gb|EDX30396.1| gutQ protein [Escherichia coli B171]
 gi|257760497|dbj|BAI31994.1| predicted phosphosugar-binding protein [Escherichia coli O103:H2
           str. 12009]
 gi|300419543|gb|EFK02854.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           182-1]
 gi|300847007|gb|EFK74767.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|308121138|gb|EFO58400.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           145-7]
 gi|323159791|gb|EFZ45763.1| arabinose 5-phosphate isomerase [Escherichia coli E128010]
 gi|324017060|gb|EGB86279.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           117-3]
          Length = 321

 Score =  202 bits (513), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|325954270|ref|YP_004237930.1| KpsF/GutQ family protein [Weeksella virosa DSM 16922]
 gi|323436888|gb|ADX67352.1| KpsF/GutQ family protein [Weeksella virosa DSM 16922]
          Length = 322

 Score =  201 bits (512), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 113/298 (37%), Positives = 170/298 (57%), Gaps = 2/298 (0%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           +   LS  F  AV +I    G++V+ GIGKS HI +K+ +TL STGTPS F+HAAEA HG
Sbjct: 24  IANRLSDSFSQAVREIFNTNGKLVVCGIGKSAHIANKIVATLNSTGTPSQFLHAAEAIHG 83

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++ ++D+ + +S SG++ E+K +    +  +  LIAIT   +SV+A  AD VL    
Sbjct: 84  DLGLLQKEDVCLCISNSGNTPEIKLLSPILKNRAKSLIAITGNTESVLAKTADYVLDASV 143

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             ES    LAPT+S   QL +GDA+A+AL+E R F + DF   HPGG LG   +   D +
Sbjct: 144 SKESGRLNLAPTSSTTAQLVMGDAIAVALMELRKFEKQDFAKYHPGGALGKRLLWRVDNI 203

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT 282
                 P V    P+ + I  ++  + G   + D+  K+ G+IT+GD+ R    H +   
Sbjct: 204 VDTSKKPQVSADAPMTEVIDSMTTGKMGITTITDKDNKVLGVITDGDLRRMLIEHPNFQH 263

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  +D+   +PK I +  L   A+ L+R ++I  ++VVDD  K  G++    +L  GI
Sbjct: 264 LKAKDIATMHPKKINKTALAATALDLIRNNSIGQIIVVDDTDKYYGVLDIHSILAEGI 321


>gi|209920147|ref|YP_002294231.1| D-arabinose 5-phosphate isomerase [Escherichia coli SE11]
 gi|209913406|dbj|BAG78480.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 308

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|281419797|ref|ZP_06250796.1| arabinose 5-phosphate isomerase [Prevotella copri DSM 18205]
 gi|281406173|gb|EFB36853.1| arabinose 5-phosphate isomerase [Prevotella copri DSM 18205]
          Length = 326

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 107/294 (36%), Positives = 179/294 (60%), Gaps = 13/294 (4%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ + +  +   +HC        +G++++TG+GKSGH+G+K+A+TLASTGTP+F+++  +
Sbjct: 35  LDDNFEKAVDMMYHC--------QGKIIVTGVGKSGHVGAKIAATLASTGTPAFYINPLD 86

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             HGDLG++T  D+++ LS SG +DEL   +      ++P+I+IT    S++A +++  +
Sbjct: 87  VYHGDLGVMTDKDVVLALSNSGQTDELLRFIPMVLHMNVPIISITGNPDSLLAKYSNHHI 146

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVC 219
           T+  + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF   HPGG+LG  L   
Sbjct: 147 TVKVKKEACPLNLAPTSSTTAALAMGDALAIALMQVRHFKPRDFAQFHPGGELGKRLLTT 206

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK- 278
           A DVM S D +P++     L +AI  +S+ + G    +DE   + G+IT+GDI R   K 
Sbjct: 207 AEDVMRS-DDMPIIPKEMHLGEAIIHVSKGKLGLGISLDEDNHVIGLITDGDIRRAMEKW 265

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +    +V D+M   PK++   T ++   +++ ++ +  ++VVD      GIV
Sbjct: 266 QAEFFNKTVSDIMTTTPKMVTPKTKISEIQRIMHKYKVHTVLVVDKDNHLKGIV 319


>gi|218555250|ref|YP_002388163.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218362018|emb|CAQ99625.1| putative phosphosugar-binding protein [Escherichia coli IAI1]
 gi|324119957|gb|EGC13835.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1167]
          Length = 321

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQTRGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|320173440|gb|EFW48639.1| Glucitol operon GutQ protein [Shigella dysenteriae CDC 74-1112]
          Length = 321

 Score =  201 bits (512), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGSA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|161984873|ref|YP_409164.2| D-arabinose 5-phosphate isomerase [Shigella boydii Sb227]
 gi|170019046|ref|YP_001724000.1| D-arabinose 5-phosphate isomerase [Escherichia coli ATCC 8739]
 gi|188492755|ref|ZP_03000025.1| gutQ protein [Escherichia coli 53638]
 gi|193069687|ref|ZP_03050639.1| gutQ protein [Escherichia coli E110019]
 gi|218706202|ref|YP_002413721.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|256019515|ref|ZP_05433380.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|260856813|ref|YP_003230704.1| putative phosphosugar-binding protein [Escherichia coli O26:H11
           str. 11368]
 gi|260869381|ref|YP_003235783.1| putative phosphosugar-binding protein [Escherichia coli O111:H-
           str. 11128]
 gi|293406199|ref|ZP_06650125.1| gutQ [Escherichia coli FVEC1412]
 gi|293412063|ref|ZP_06654786.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298381936|ref|ZP_06991533.1| gutQ [Escherichia coli FVEC1302]
 gi|300820482|ref|ZP_07100633.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           119-7]
 gi|300899944|ref|ZP_07118149.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           198-1]
 gi|300906795|ref|ZP_07124476.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300919266|ref|ZP_07135784.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           115-1]
 gi|301027068|ref|ZP_07190443.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|301305407|ref|ZP_07211501.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           124-1]
 gi|307314407|ref|ZP_07594012.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|312973083|ref|ZP_07787256.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|331664259|ref|ZP_08365165.1| protein GutQ [Escherichia coli TA143]
 gi|331669440|ref|ZP_08370286.1| protein GutQ [Escherichia coli TA271]
 gi|331674216|ref|ZP_08374976.1| protein GutQ [Escherichia coli TA280]
 gi|331678680|ref|ZP_08379354.1| protein GutQ [Escherichia coli H591]
 gi|332280638|ref|ZP_08393051.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|169753974|gb|ACA76673.1| KpsF/GutQ family protein [Escherichia coli ATCC 8739]
 gi|188487954|gb|EDU63057.1| gutQ protein [Escherichia coli 53638]
 gi|192957050|gb|EDV87501.1| gutQ protein [Escherichia coli E110019]
 gi|218433299|emb|CAR14199.1| putative phosphosugar-binding protein [Escherichia coli UMN026]
 gi|257755462|dbj|BAI26964.1| predicted phosphosugar-binding protein [Escherichia coli O26:H11
           str. 11368]
 gi|257765737|dbj|BAI37232.1| predicted phosphosugar-binding protein [Escherichia coli O111:H-
           str. 11128]
 gi|284922644|emb|CBG35732.1| D-arabinose 5-phosphate isomerase [Escherichia coli 042]
 gi|291426205|gb|EFE99237.1| gutQ [Escherichia coli FVEC1412]
 gi|291468834|gb|EFF11325.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298277076|gb|EFI18592.1| gutQ [Escherichia coli FVEC1302]
 gi|300356512|gb|EFJ72382.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           198-1]
 gi|300395212|gb|EFJ78750.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|300401396|gb|EFJ84934.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300413637|gb|EFJ96947.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           115-1]
 gi|300526746|gb|EFK47815.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           119-7]
 gi|300839327|gb|EFK67087.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           124-1]
 gi|306905975|gb|EFN36496.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|310333025|gb|EFQ00239.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|315061984|gb|ADT76311.1| arabinose-5-phosphate isomerase [Escherichia coli W]
 gi|315254484|gb|EFU34452.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 85-1]
 gi|320180872|gb|EFW55795.1| Glucitol operon GutQ protein [Shigella boydii ATCC 9905]
 gi|320186494|gb|EFW61222.1| Glucitol operon GutQ protein [Shigella flexneri CDC 796-83]
 gi|323154919|gb|EFZ41111.1| arabinose 5-phosphate isomerase [Escherichia coli EPECa14]
 gi|323173010|gb|EFZ58641.1| arabinose 5-phosphate isomerase [Escherichia coli LT-68]
 gi|323180126|gb|EFZ65678.1| arabinose 5-phosphate isomerase [Escherichia coli 1180]
 gi|323377434|gb|ADX49702.1| KpsF/GutQ family protein [Escherichia coli KO11]
 gi|331058190|gb|EGI30171.1| protein GutQ [Escherichia coli TA143]
 gi|331063108|gb|EGI35021.1| protein GutQ [Escherichia coli TA271]
 gi|331068310|gb|EGI39705.1| protein GutQ [Escherichia coli TA280]
 gi|331073510|gb|EGI44831.1| protein GutQ [Escherichia coli H591]
 gi|332087426|gb|EGI92554.1| arabinose 5-phosphate isomerase [Shigella boydii 5216-82]
 gi|332091809|gb|EGI96887.1| arabinose 5-phosphate isomerase [Shigella boydii 3594-74]
 gi|332102990|gb|EGJ06336.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
          Length = 321

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|118474673|ref|YP_892917.1| KpsF/GutQ [Campylobacter fetus subsp. fetus 82-40]
 gi|118413899|gb|ABK82319.1| KpsF/GutQ [Campylobacter fetus subsp. fetus 82-40]
          Length = 326

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/317 (37%), Positives = 197/317 (62%), Gaps = 10/317 (3%)

Query: 30  SIIAEKRGLSSLESSLQGEL-SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           SI  E   L + E   Q EL  F+F  AV    + KG+++I+G+GKSG +G+K+A+TLAS
Sbjct: 14  SIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVGAKIAATLAS 73

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTPSFF+H  EA HGDLGMI+++D ++ +S+SG S EL  IL + ++  I +I + +++
Sbjct: 74  TGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGIKIIGM-AKS 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   +D  ++L    E+CP G APT S  + LA+GDALA+ L++ + F + DF +LH
Sbjct: 133 GSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEFKKEDFAMLH 192

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L++   DVM   D +P+V     L  AI  ++  + G V + ++   L  ++
Sbjct: 193 PGGSLGKRLYLKVKDVMRK-DELPIVSDDVSLKFAINSMTHGKLGTVLLTNKNGLLVAVL 251

Query: 268 TEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDC 323
           ++GD+ R   N + ++N  +++    KNPKV+ ++ +L   A++L+ ++ I +L++  D 
Sbjct: 252 SDGDLRRALGNENFNINDQAIK-FATKNPKVLEDENMLAYDALKLIEEYKIQILIITKD- 309

Query: 324 QKAIGIVHFLDLLRFGI 340
           +K IG +H  DL   G+
Sbjct: 310 KKPIGALHIHDLTSLGL 326


>gi|325496251|gb|EGC94110.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ECD227]
          Length = 321

 Score =  201 bits (511), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVTLTASVMDAMLELSRTGLGLVAVCDVQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K +G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLVGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|110806667|ref|YP_690187.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 5 str. 8401]
 gi|110616215|gb|ABF04882.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|333001046|gb|EGK20616.1| arabinose 5-phosphate isomerase [Shigella flexneri K-272]
 gi|333015451|gb|EGK34790.1| arabinose 5-phosphate isomerase [Shigella flexneri K-227]
          Length = 321

 Score =  201 bits (511), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|81246628|gb|ABB67336.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 308

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|30042323|gb|AAP18048.1| hypothetical protein S2922 [Shigella flexneri 2a str. 2457T]
 gi|56383718|gb|AAN44222.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
          Length = 308

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|218696299|ref|YP_002403966.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218353031|emb|CAU98856.1| putative phosphosugar-binding protein [Escherichia coli 55989]
 gi|323183231|gb|EFZ68628.1| arabinose 5-phosphate isomerase [Escherichia coli 1357]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|161485808|ref|NP_708515.3| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 301]
 gi|161486447|ref|NP_838238.2| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|281602077|gb|ADA75061.1| putative sugar phosphate isomerase involved in capsule formation
           [Shigella flexneri 2002017]
 gi|332753425|gb|EGJ83805.1| arabinose 5-phosphate isomerase [Shigella flexneri 4343-70]
 gi|332753933|gb|EGJ84308.1| arabinose 5-phosphate isomerase [Shigella flexneri K-671]
 gi|332765659|gb|EGJ95872.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 2930-71]
 gi|333000646|gb|EGK20223.1| arabinose 5-phosphate isomerase [Shigella flexneri K-218]
 gi|333015825|gb|EGK35161.1| arabinose 5-phosphate isomerase [Shigella flexneri K-304]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|161367540|ref|NP_289257.2| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMXELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|256027345|ref|ZP_05441179.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
 gi|260494439|ref|ZP_05814569.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_33]
 gi|289765313|ref|ZP_06524691.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
 gi|260197601|gb|EEW95118.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_33]
 gi|289716868|gb|EFD80880.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
          Length = 323

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 122/306 (39%), Positives = 183/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKTNTSMEDIVILMSEKKLGVVCVMNDENNVLVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M  N   + ++ + T A+ ++  R H I+VL V D  +K +G++ 
Sbjct: 257 LRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-EKFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|38704115|ref|NP_311591.2| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           Sakai]
 gi|89109495|ref|AP_003275.1| predicted phosphosugar-binding protein [Escherichia coli str. K-12
           substr. W3110]
 gi|90111480|ref|NP_417188.4| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|168749968|ref|ZP_02774990.1| gutQ protein [Escherichia coli O157:H7 str. EC4113]
 gi|168755452|ref|ZP_02780459.1| gutQ protein [Escherichia coli O157:H7 str. EC4401]
 gi|168762894|ref|ZP_02787901.1| gutQ protein [Escherichia coli O157:H7 str. EC4501]
 gi|168768798|ref|ZP_02793805.1| gutQ protein [Escherichia coli O157:H7 str. EC4486]
 gi|168774761|ref|ZP_02799768.1| gutQ protein [Escherichia coli O157:H7 str. EC4196]
 gi|168778689|ref|ZP_02803696.1| gutQ protein [Escherichia coli O157:H7 str. EC4076]
 gi|168787962|ref|ZP_02812969.1| gutQ protein [Escherichia coli O157:H7 str. EC869]
 gi|168800212|ref|ZP_02825219.1| gutQ protein [Escherichia coli O157:H7 str. EC508]
 gi|170082284|ref|YP_001731604.1| phosphosugar-binding protein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170680279|ref|YP_001744855.1| D-arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|194438978|ref|ZP_03071062.1| gutQ protein [Escherichia coli 101-1]
 gi|195938457|ref|ZP_03083839.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807068|ref|ZP_03249405.1| gutQ protein [Escherichia coli O157:H7 str. EC4206]
 gi|208814267|ref|ZP_03255596.1| gutQ protein [Escherichia coli O157:H7 str. EC4045]
 gi|208819202|ref|ZP_03259522.1| gutQ protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396393|ref|YP_002272170.1| gutQ protein [Escherichia coli O157:H7 str. EC4115]
 gi|217326989|ref|ZP_03443072.1| gutQ protein [Escherichia coli O157:H7 str. TW14588]
 gi|218701198|ref|YP_002408827.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|238901845|ref|YP_002927641.1| putative phosphosugar-binding protein [Escherichia coli BW2952]
 gi|253772437|ref|YP_003035268.1| D-arabinose 5-phosphate isomerase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037747|ref|ZP_04871805.1| gutQ protein [Escherichia sp. 1_1_43]
 gi|254162639|ref|YP_003045747.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|254794648|ref|YP_003079485.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256024785|ref|ZP_05438650.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 4_1_40B]
 gi|261226002|ref|ZP_05940283.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261256740|ref|ZP_05949273.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291284035|ref|YP_003500853.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293449021|ref|ZP_06663442.1| gutQ [Escherichia coli B088]
 gi|300815889|ref|ZP_07096113.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           107-1]
 gi|300930562|ref|ZP_07145956.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           187-1]
 gi|300941078|ref|ZP_07155593.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300947019|ref|ZP_07161242.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           116-1]
 gi|300954943|ref|ZP_07167358.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           175-1]
 gi|301026628|ref|ZP_07190048.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           196-1]
 gi|301645316|ref|ZP_07245264.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           146-1]
 gi|307139395|ref|ZP_07498751.1| D-arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331643391|ref|ZP_08344522.1| protein GutQ [Escherichia coli H736]
 gi|14917002|sp|P17115|GUTQ_ECOLI RecName: Full=Protein gutQ
 gi|85675529|dbj|BAE76785.1| predicted phosphosugar-binding protein [Escherichia coli str. K12
           substr. W3110]
 gi|87082151|gb|AAC75750.2| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169890119|gb|ACB03826.1| predicted phosphosugar-binding protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517997|gb|ACB16175.1| gutQ protein [Escherichia coli SMS-3-5]
 gi|187769637|gb|EDU33481.1| gutQ protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015808|gb|EDU53930.1| gutQ protein [Escherichia coli O157:H7 str. EC4113]
 gi|189003593|gb|EDU72579.1| gutQ protein [Escherichia coli O157:H7 str. EC4076]
 gi|189357261|gb|EDU75680.1| gutQ protein [Escherichia coli O157:H7 str. EC4401]
 gi|189362131|gb|EDU80550.1| gutQ protein [Escherichia coli O157:H7 str. EC4486]
 gi|189366887|gb|EDU85303.1| gutQ protein [Escherichia coli O157:H7 str. EC4501]
 gi|189372156|gb|EDU90572.1| gutQ protein [Escherichia coli O157:H7 str. EC869]
 gi|189377455|gb|EDU95871.1| gutQ protein [Escherichia coli O157:H7 str. EC508]
 gi|194422099|gb|EDX38102.1| gutQ protein [Escherichia coli 101-1]
 gi|208726869|gb|EDZ76470.1| gutQ protein [Escherichia coli O157:H7 str. EC4206]
 gi|208735544|gb|EDZ84231.1| gutQ protein [Escherichia coli O157:H7 str. EC4045]
 gi|208739325|gb|EDZ87007.1| gutQ protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157793|gb|ACI35226.1| gutQ protein [Escherichia coli O157:H7 str. EC4115]
 gi|217319356|gb|EEC27781.1| gutQ protein [Escherichia coli O157:H7 str. TW14588]
 gi|218371184|emb|CAR19015.1| putative phosphosugar-binding protein [Escherichia coli IAI39]
 gi|226839371|gb|EEH71392.1| gutQ protein [Escherichia sp. 1_1_43]
 gi|238862829|gb|ACR64827.1| predicted phosphosugar-binding protein [Escherichia coli BW2952]
 gi|242378265|emb|CAQ33040.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|253323481|gb|ACT28083.1| KpsF/GutQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974540|gb|ACT40211.1| predicted phosphosugar-binding protein [Escherichia coli B str.
           REL606]
 gi|253978707|gb|ACT44377.1| predicted phosphosugar-binding protein [Escherichia coli BL21(DE3)]
 gi|254594048|gb|ACT73409.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. TW14359]
 gi|260448242|gb|ACX38664.1| KpsF/GutQ family protein [Escherichia coli DH1]
 gi|290763908|gb|ADD57869.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322111|gb|EFE61540.1| gutQ [Escherichia coli B088]
 gi|299879643|gb|EFI87854.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           196-1]
 gi|300318116|gb|EFJ67900.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           175-1]
 gi|300453333|gb|EFK16953.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           116-1]
 gi|300454187|gb|EFK17680.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300461566|gb|EFK25059.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           187-1]
 gi|300531818|gb|EFK52880.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           107-1]
 gi|301076386|gb|EFK91192.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           146-1]
 gi|309703067|emb|CBJ02399.1| D-arabinose 5-phosphate isomerase [Escherichia coli ETEC H10407]
 gi|315137315|dbj|BAJ44474.1| D-arabinose 5-phosphate isomerase [Escherichia coli DH1]
 gi|315615093|gb|EFU95730.1| arabinose 5-phosphate isomerase [Escherichia coli 3431]
 gi|320189040|gb|EFW63699.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. EC1212]
 gi|320640351|gb|EFX09890.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645898|gb|EFX14879.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str.
           493-89]
 gi|320651198|gb|EFX19633.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str. H
           2687]
 gi|320656748|gb|EFX24636.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662291|gb|EFX29688.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667342|gb|EFX34300.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323941462|gb|EGB37645.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E482]
 gi|323946414|gb|EGB42442.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H120]
 gi|323960633|gb|EGB56259.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H489]
 gi|323971503|gb|EGB66737.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
 gi|326339221|gb|EGD63036.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. 1044]
 gi|326342896|gb|EGD66664.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. 1125]
 gi|331036862|gb|EGI09086.1| protein GutQ [Escherichia coli H736]
 gi|332344588|gb|AEE57922.1| arabinose 5-phosphate isomerase [Escherichia coli UMNK88]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|293415957|ref|ZP_06658597.1| gutQ [Escherichia coli B185]
 gi|291432146|gb|EFF05128.1| gutQ [Escherichia coli B185]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQAQSRAINAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|313674849|ref|YP_004052845.1| kpsf/gutq family protein [Marivirga tractuosa DSM 4126]
 gi|312941547|gb|ADR20737.1| KpsF/GutQ family protein [Marivirga tractuosa DSM 4126]
          Length = 313

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/316 (37%), Positives = 189/316 (59%), Gaps = 11/316 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A  +I  E + +  LES L  +    F  AV  I   KG++++TG+GKSG IG K+A
Sbjct: 5   LESAKETIAIEAKSIKDLESILTPD----FEQAVHAIMESKGKLIVTGMGKSGIIGKKIA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T +STGTPS+F+H  EA HGDLG+I  DD+++ +S SG +DEL  I+ +  R    +I 
Sbjct: 61  ATFSSTGTPSYFLHPGEAYHGDLGLIQEDDIVMAISNSGETDELLKIIPFFLRNGNKIIG 120

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++   +S +A +    L +  E E+CP  LAPT+S    L +GDALA+AL++ R+F    
Sbjct: 121 VSGNPESTLAKNTHFHLNVHVEQEACPLDLAPTSSTTATLVMGDALAVALMKERDFKPEH 180

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG  L +   DVM S D +P++     +   I  +S  R G +A+++E  +
Sbjct: 181 FALFHPGGSLGRRLLMTVKDVMRSSD-LPVIDSHSDMDVVIHSISNGRLG-LAIIEENGE 238

Query: 263 LKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L G+IT+GD+ R  +   +   +L  +D+M K+P  I ++  L  A +++ +  I+ L+V
Sbjct: 239 LVGVITDGDLRRGMNAQKESFLSLKAKDIMTKSPISIDKEMKLKKAEEMMMECKINTLLV 298

Query: 320 VDDCQKAIGIVHFLDL 335
           V++ QK +G++   DL
Sbjct: 299 VEN-QKCVGVLQVYDL 313


>gi|332999445|gb|EGK19030.1| arabinose 5-phosphate isomerase [Shigella flexneri VA-6]
          Length = 321

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSSTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|12517153|gb|AAG57815.1|AE005499_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 308

 Score =  201 bits (510), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMXELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|32266671|ref|NP_860703.1| hypothetical protein HH1172 [Helicobacter hepaticus ATCC 51449]
 gi|32262722|gb|AAP77769.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 322

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/289 (38%), Positives = 179/289 (61%), Gaps = 8/289 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I   +G+VV+ G+GKSG IG+K+++TL+STGTPS F+H  EA HGDLG++ ++D+++
Sbjct: 36  VECIINSQGKVVVCGVGKSGLIGAKISATLSSTGTPSVFMHPTEAMHGDLGLLQKNDIVL 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S+SG S+EL  IL + +R   P+I ++ +  S ++   D  L +  + E+CP  +APT
Sbjct: 96  AISYSGKSEELLNILPHIKRLGNPIITMSKDINSPLSRMGDYFLDISIQKEACPLNIAPT 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKI 235
           +S  + LA+GDALA+ L++ R+F  N+F   HPGG LG  LFV   D+M   +++PL+  
Sbjct: 156 SSTTLTLALGDALAVCLMKRRDFKANNFASFHPGGALGKQLFVKLKDLMQI-ENLPLISP 214

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKN 292
             PL  AI I+S+KR G  A++ +   L GI+++GD+ R   N   DLN   V     +N
Sbjct: 215 DLPLSQAIIIMSQKRLGS-AIITQNDALWGILSDGDLRRAMMNKDFDLNA-PVSIYATRN 272

Query: 293 PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           PK      +L   A++ + ++ I +L++ +      G++H   L+  GI
Sbjct: 273 PKTCDNPDILAFDALKFMEENKIQLLIITNKQNHIQGVIHLHTLIAAGI 321


>gi|154497302|ref|ZP_02035998.1| hypothetical protein BACCAP_01595 [Bacteroides capillosus ATCC
           29799]
 gi|150273701|gb|EDN00829.1| hypothetical protein BACCAP_01595 [Bacteroides capillosus ATCC
           29799]
          Length = 324

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/324 (36%), Positives = 183/324 (56%), Gaps = 9/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A R    E R L S+  SL      +F   +E+I   +G+V+ITG+GK GHIG+
Sbjct: 6   SEALTSARRLFDTEIRALESVRDSLDQ----RFLDILEQIVNCRGKVIITGMGKPGHIGT 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+AS GTP+F++H AEA HGDLGM+  DD+++ +S+SG SDE+  ++   +     
Sbjct: 62  KIAATMASLGTPAFYLHPAEALHGDLGMVGADDVVLAISYSGESDEVIRLIPSLKLIGAT 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI I+    S +   +D     P   E+C   LAPT+S    L +GDALA+   E   F+
Sbjct: 122 LIGISGNADSTLIRFSDYSFVFPPFEEACHMHLAPTSSTTAALVLGDALAVCASERYGFN 181

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E +F + HP G LG  L V   D+MH  +   ++  G  L +AI  +S K  G + + D 
Sbjct: 182 EKNFALFHPAGALGKRLLVRTGDLMHKDEGNAVIHPGASLWEAIGEMSRKALGILCIAD- 240

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G KL+G+ T+GD+ R   +  D+    ++DVM ++P  +  D L   A++ + + NIS L
Sbjct: 241 GDKLEGVFTDGDLRRVMSRRVDIYGARIDDVMTRSPITVGPDVLAVEALREMNRRNISAL 300

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
            V+ D ++ +G +   D+   GII
Sbjct: 301 PVL-DGERLVGTIRINDITGAGII 323


>gi|157162154|ref|YP_001459472.1| D-arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|157067834|gb|ABV07089.1| gutQ protein [Escherichia coli HS]
          Length = 321

 Score =  200 bits (509), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|882600|gb|AAA69217.1| alternate gene name srlQ [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363035|dbj|BAB36987.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|209762008|gb|ACI79316.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762010|gb|ACI79317.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762012|gb|ACI79318.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762014|gb|ACI79319.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762016|gb|ACI79320.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|262176875|gb|ACY27492.1| D-arabinose 5-phosphate isomerase [Escherichia coli LW1655F+]
          Length = 308

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|196234330|ref|ZP_03133159.1| KpsF/GutQ family protein [Chthoniobacter flavus Ellin428]
 gi|196221597|gb|EDY16138.1| KpsF/GutQ family protein [Chthoniobacter flavus Ellin428]
          Length = 323

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 110/270 (40%), Positives = 163/270 (60%), Gaps = 3/270 (1%)

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGHIG K+A+TL STG+P+  +++  A HGDLG++   D+I+ LS SG +DEL  IL   
Sbjct: 54  SGHIGEKIAATLTSTGSPAVVLNSLNALHGDLGVVADGDVILALSSSGETDELVNILPAL 113

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            RF++ +IA+T   KS +A ++ + L +  E E+CP  LAPT+S  + L +GDALA+ LL
Sbjct: 114 SRFNVRIIAMTGNPKSFIAQNSHVHLDVNVEQEACPLNLAPTSSTTVMLVLGDALAMVLL 173

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           E+R F + DF   HPGG+LG TL +  + +M   + + LV     + +A+  +++ R G 
Sbjct: 174 EARGFQKEDFARFHPGGRLGRTLLLKVNQIMRGKEQMALVSPTVTIREALLKMADVRAGL 233

Query: 254 VAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
              VD+   L GI T GD  R+F  H DL   ++ D +I+ P  I  D L    + L+ Q
Sbjct: 234 AVAVDDAGGLAGIFTHGDFGRHFRAHADLLERTLGDFLIRRPITIHHDKLAVEVLHLIEQ 293

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           H I  L+VVDD  + +G+V   DL RF +I
Sbjct: 294 HRIDDLVVVDDENRPVGVVDSQDLARFRLI 323


>gi|320197711|gb|EFW72320.1| Glucitol operon GutQ protein [Escherichia coli EC4100B]
          Length = 321

 Score =  200 bits (508), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH +EA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPSEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|215488021|ref|YP_002330452.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965616|ref|ZP_07779846.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|215266093|emb|CAS10513.1| predicted phosphosugar-binding protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|312289765|gb|EFR17655.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
          Length = 321

 Score =  199 bits (507), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|311278344|ref|YP_003940575.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
 gi|308747539|gb|ADO47291.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
          Length = 321

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/302 (39%), Positives = 175/302 (57%), Gaps = 4/302 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A + I + KG++V++GIGKSGHIG KLA+T ASTGTP+FFVH AEA 
Sbjct: 21  SRLPDRLDESFVRAAQTIISCKGKLVVSGIGKSGHIGKKLAATFASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D+++ +S+SGS+ EL+ I+      SI L+A+T +++S +A  A  VL +
Sbjct: 81  HGDLGMLESQDVMLFISYSGSAKELELIIPRLEEKSIALLAMTGKSQSPLALAAAAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
               E+CP  LAPT+S +  L +GDALA+A++++R FSE DF   HP G LG  L     
Sbjct: 141 SVAREACPMRLAPTSSTVNTLMLGDALAMAVMQARGFSEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
            +M   D +P V +   ++DA+  LS    G VAV D   ++ G+ T+GD+ R   +   
Sbjct: 201 HLMRKDDEVPKVTVDANVMDAMLELSRTGLGLVAVCDSAGQVSGVFTDGDLRRWLVRGGT 260

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           LN  +V + M      +        A ++L +H IS   VVD+     G ++  +    G
Sbjct: 261 LND-AVSEAMTTGGVTLQSQERAIDAKEILMRHKISAAPVVDENGYLTGAINLQNFYHAG 319

Query: 340 II 341
           II
Sbjct: 320 II 321


>gi|324111332|gb|EGC05314.1| KpsF/GutQ family protein sugar isomerase [Escherichia fergusonii
           B253]
          Length = 321

 Score =  199 bits (507), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVTLTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|306812414|ref|ZP_07446612.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|222034401|emb|CAP77143.1| Protein gutQ [Escherichia coli LF82]
 gi|305854452|gb|EFM54890.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|312947236|gb|ADR28063.1| D-arabinose 5-phosphate isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|324005749|gb|EGB74968.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 57-2]
          Length = 321

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|309388533|gb|ADO76413.1| KpsF/GutQ family protein [Halanaerobium praevalens DSM 2228]
          Length = 332

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 127/296 (42%), Positives = 176/296 (59%), Gaps = 4/296 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L+ EL   F  A+E I   +GRVV TG+GK+G +  KLA+T +STGT +FFVHA E  HG
Sbjct: 34  LKAELDGSFKKAMEMIIDAQGRVVFTGVGKTGLVAKKLAATFSSTGTSAFFVHAGEGLHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMI   D++I +S SG +DE+ ++L   RR  + LIA+T    S +A HAD+VL    
Sbjct: 94  DLGMIREGDVVIAVSNSGETDEVISLLPSLRRIGVKLIALTGNGSSTLAEHADLVLKADV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
             E+CPH LAPT S    LA+GDALAIAL     FS  DF + HPGG LG  L     DV
Sbjct: 154 VSEACPHNLAPTASTTAALALGDALAIALSSYYGFSPEDFALFHPGGSLGRKLLTKVQDV 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           +   +  P+V I   +  A+  +++ + G  ++VD+   LKGIIT+GDI R   K  D  
Sbjct: 214 IKIREQNPVVAIDATVRGALFKMTQSQMGSTSIVDQNGDLKGIITDGDIRRLLEKSSDFI 273

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V+  M  +P  I  D L   A+Q++    I+ L VV++ +K + +++F DLLR
Sbjct: 274 EEPVKKYMTIDPISIAPDKLAAEALQIMEAKEINDLPVVEN-EKPVAMLNFQDLLR 328


>gi|194432964|ref|ZP_03065247.1| gutQ protein [Shigella dysenteriae 1012]
 gi|194418691|gb|EDX34777.1| gutQ protein [Shigella dysenteriae 1012]
 gi|332088726|gb|EGI93839.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 155-74]
          Length = 321

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH  EA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPVEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|281179712|dbj|BAI56042.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 321

 Score =  199 bits (506), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 173/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M  +   +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVDGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|110642828|ref|YP_670558.1| D-arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|191171405|ref|ZP_03032954.1| gutQ protein [Escherichia coli F11]
 gi|300975095|ref|ZP_07172862.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           200-1]
 gi|110344420|gb|ABG70657.1| putative phosphosugar binding protein [Escherichia coli 536]
 gi|190908339|gb|EDV67929.1| gutQ protein [Escherichia coli F11]
 gi|300308776|gb|EFJ63296.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           200-1]
 gi|324013714|gb|EGB82933.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 60-1]
          Length = 321

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|223940272|ref|ZP_03632130.1| KpsF/GutQ family protein [bacterium Ellin514]
 gi|223891039|gb|EEF57542.1| KpsF/GutQ family protein [bacterium Ellin514]
          Length = 336

 Score =  199 bits (506), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 101/281 (35%), Positives = 179/281 (63%), Gaps = 3/281 (1%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G++++ GIGKSG IG K+A+TL+STG+ S  +++ +A HGDLG++   DLI+ LS+SG 
Sbjct: 56  RGKIIVVGIGKSGAIGRKIAATLSSTGSTSVVLNSVDAVHGDLGIVNDGDLILALSYSGE 115

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S+EL  ++   +RFS+ LI+IT   KS +A ++D+VL +    E+CP  LAPT+S  + L
Sbjct: 116 SEELLNLMPALKRFSVKLISITGVPKSSLARYSDVVLNVKVAKEACPFNLAPTSSTTVTL 175

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDALA+A+L++R F + DF   HP G +G  + +   ++M +G    + +    + +A
Sbjct: 176 VMGDALAMAVLQARGFKKQDFARRHPAGAIGRAMLLKVGEIMRTGQRNAVAQETLAVKEA 235

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDT 300
           + +++  + G ++VV+   KL G+ T+GD  R+   + DL +  V+ VM +NP  I ++ 
Sbjct: 236 LMVMTRAKTGSLSVVNSKGKLVGVFTDGDFRRHMATNNDLLSQPVKTVMTRNPICIRDEA 295

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L   A+++  + NI  L+VV+  ++ +G++   DL +  ++
Sbjct: 296 LAQEALKIFNERNIDDLIVVNARREPVGLIDSQDLPKLKLM 336


>gi|94268327|ref|ZP_01291143.1| KpsF/GutQ [delta proteobacterium MLMS-1]
 gi|93451652|gb|EAT02439.1| KpsF/GutQ [delta proteobacterium MLMS-1]
          Length = 311

 Score =  199 bits (505), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 113/275 (41%), Positives = 165/275 (60%), Gaps = 6/275 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AVE I A   R++++GIGKSG IG K+A+T+ STGTP+ F+H  EA HGDLG++   
Sbjct: 30  FERAVELIMACPTRLIVSGIGKSGIIGQKIAATMNSTGTPALFLHPVEAMHGDLGIVDPR 89

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++ +S+SG + EL  +L   +     +IA+T    S +A  AD VL +    E+CP G
Sbjct: 90  DVVLAISYSGETAELNLLLPTLKSRGARIIAMTGRPDSGLAAAADAVLNVAVPCEACPLG 149

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           LAPT S    LA+GDALA+ LL  +NF+  DF   HPGG LG  L +  S+VM +G  IP
Sbjct: 150 LAPTASTTATLALGDALAVVLLRRKNFAAGDFRRNHPGGSLGERLKIRVSEVMLTGAEIP 209

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFR----NFHKDLNTLSVE 286
            V     L +A+  L+ K  G V V+  +G+ + GI+T+GD+ R        D   LS+ 
Sbjct: 210 TVAEDASLPEAVAELNRKNLGAVLVMAADGETMVGILTDGDLRRMVADGRQADFAELSLT 269

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            VM ++PK I  + L   A+ ++++H ++VL V D
Sbjct: 270 AVMGRDPKCITPELLAADALSIMQRHEVTVLPVTD 304


>gi|237808636|ref|YP_002893076.1| D-arabinose 5-phosphate isomerase [Tolumonas auensis DSM 9187]
 gi|237500897|gb|ACQ93490.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
          Length = 321

 Score =  199 bits (505), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/280 (42%), Positives = 168/280 (60%), Gaps = 4/280 (1%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLGMI  DD++I +S+SG 
Sbjct: 42  KGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLGMIGVDDVLIFISYSGK 101

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + E + IL   +   I LIA+T +  S +A  A  VL +  E E+CP G+APT+SA+  L
Sbjct: 102 AKEQEYILPLIKENQISLIAMTGDKNSPLAKAATCVLDISVEREACPIGVAPTSSAVNTL 161

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDALA+AL+  R F   DF   HPGG LG  L     DVM + + +P+V     +++A
Sbjct: 162 MMGDALAMALMRQRGFGAEDFARSHPGGSLGARLLNRVHDVMQTDELLPIVDEHSSVMEA 221

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDT 300
           +  LS    G VAV D  + + G+ T+GD+ R   K+ N+LS  +E  M +         
Sbjct: 222 MLELSRTGMGLVAVCDAEKYVVGVFTDGDLRRWLVKE-NSLSNQLEQAMTRPGYRFPSHW 280

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + A+  L +H IS   VVD     +G+++   L   GI
Sbjct: 281 RASEALDALHEHQISAAPVVDANGILVGVLNLHRLHDAGI 320


>gi|26249103|ref|NP_755143.1| D-arabinose 5-phosphate isomerase [Escherichia coli CFT073]
 gi|91212067|ref|YP_542053.1| D-arabinose 5-phosphate isomerase [Escherichia coli UTI89]
 gi|117624939|ref|YP_853927.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|218559696|ref|YP_002392609.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218690830|ref|YP_002399042.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|227888244|ref|ZP_04006049.1| D-arabinose 5-phosphate isomerase [Escherichia coli 83972]
 gi|237706672|ref|ZP_04537153.1| GutQ protein [Escherichia sp. 3_2_53FAA]
 gi|300976914|ref|ZP_07173666.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|301049543|ref|ZP_07196498.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           185-1]
 gi|331648426|ref|ZP_08349514.1| protein GutQ [Escherichia coli M605]
 gi|331658813|ref|ZP_08359755.1| protein GutQ [Escherichia coli TA206]
 gi|331684320|ref|ZP_08384912.1| protein GutQ [Escherichia coli H299]
 gi|26109510|gb|AAN81713.1|AE016765_115 GutQ protein [Escherichia coli CFT073]
 gi|91073641|gb|ABE08522.1| GutQ protein [Escherichia coli UTI89]
 gi|115514063|gb|ABJ02138.1| putative phosphosugar-binding protein [Escherichia coli APEC O1]
 gi|218366465|emb|CAR04217.1| putative phosphosugar-binding protein [Escherichia coli S88]
 gi|218428394|emb|CAR09320.2| putative phosphosugar-binding protein [Escherichia coli ED1a]
 gi|226899712|gb|EEH85971.1| GutQ protein [Escherichia sp. 3_2_53FAA]
 gi|227834513|gb|EEJ44979.1| D-arabinose 5-phosphate isomerase [Escherichia coli 83972]
 gi|294491679|gb|ADE90435.1| gutQ protein [Escherichia coli IHE3034]
 gi|300298668|gb|EFJ55053.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           185-1]
 gi|300409928|gb|EFJ93466.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|307554682|gb|ADN47457.1| predicted phosphosugar-binding protein [Escherichia coli ABU 83972]
 gi|315289204|gb|EFU48602.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           110-3]
 gi|315293664|gb|EFU53016.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           153-1]
 gi|315298706|gb|EFU57960.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 16-3]
 gi|320194842|gb|EFW69471.1| Glucitol operon GutQ protein [Escherichia coli WV_060327]
 gi|323951074|gb|EGB46950.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
 gi|323957082|gb|EGB52807.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
 gi|330908739|gb|EGH37253.1| glucitol operon GutQ protein [Escherichia coli AA86]
 gi|331042173|gb|EGI14315.1| protein GutQ [Escherichia coli M605]
 gi|331053395|gb|EGI25424.1| protein GutQ [Escherichia coli TA206]
 gi|331077935|gb|EGI49141.1| protein GutQ [Escherichia coli H299]
          Length = 321

 Score =  198 bits (504), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|325107942|ref|YP_004269010.1| KpsF/GutQ family protein [Planctomyces brasiliensis DSM 5305]
 gi|324968210|gb|ADY58988.1| KpsF/GutQ family protein [Planctomyces brasiliensis DSM 5305]
          Length = 346

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/295 (38%), Positives = 174/295 (58%), Gaps = 7/295 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           EL  +F  AV++I A  G VV+TGIGK+G IG K+A+TL+STGT S F+H AEA HGDLG
Sbjct: 38  ELDARFCAAVDQIAACTGSVVVTGIGKAGLIGQKIAATLSSTGTRSHFLHPAEAVHGDLG 97

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +  DDL+++LS SG ++E+  +L   +R  IP+I+ T+   S +A  + +V+ L +  E
Sbjct: 98  CLRPDDLVLILSNSGETEEVCRLLPVLQRLQIPIISFTATGHSTLAQASKVVIPLGRMRE 157

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           +  HGL P+T+    LAIGDALA+ L   R FS  DF V HP G LG      +DVM +G
Sbjct: 158 AGLHGLPPSTTTTAMLAIGDALALVLARLRGFSPQDFAVYHPAGSLGRKLTPVTDVMRTG 217

Query: 228 DSIPLVKIGCPLIDAI---TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLN- 281
           DS+  V      + A+    +   +R G V ++D+  KL G+ T+ D+ R    H++   
Sbjct: 218 DSL-RVAHEHETVRAVFGQALNPARRVGAVMILDDHDKLSGLFTDSDLARILASHQEQKL 276

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + +VM + P  I  D +L+  + LL +  +S L VVD+    +G++   D++
Sbjct: 277 DRPIREVMTQRPITIRPDAVLSEVVDLLAERKLSELPVVDESGAPVGMIDITDII 331


>gi|282891230|ref|ZP_06299733.1| hypothetical protein pah_c048o064 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498923|gb|EFB41239.1| hypothetical protein pah_c048o064 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 319

 Score =  198 bits (503), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 175/292 (59%), Gaps = 9/292 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           +E  +  KG ++ TG+GKSG++  K+A+T+ STGT + F+   +A HGD+G++T DD+ +
Sbjct: 29  LEICQNCKGVLIFTGVGKSGYVAKKVAATMTSTGTRALFLSPTDALHGDIGIVTSDDVFL 88

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG +DEL  ++   R     +I I S  KS +A   DI + LP + E CP  L PT
Sbjct: 89  ILSKSGETDELLNLMPCLRNKGATIIGIVSNAKSRLAKACDIFIELPLQKELCPFDLVPT 148

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKI 235
           TS  +Q+  GD LA+ L+  +NFS++ + + HP G +G  + V   D+M +G +IP+   
Sbjct: 149 TSTTIQMIFGDVLAVELMTHKNFSKDQYGLNHPAGTIGKRVNVKVKDLMLTGSAIPICYP 208

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTLSVEDVMIK 291
              L+D +  LS K+ GCV +VD    LKGI T+GD+ R   K+    L T  +  +M +
Sbjct: 209 ENKLVDILVELSNKKCGCVLIVDNQFILKGIFTDGDLRRALQKNGVQVLET-PIGQIMSQ 267

Query: 292 NPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            P++I  D L   AM+ +   ++H I+VL VVDD  K +G++   DL++ GI
Sbjct: 268 KPQLITPDVLAFEAMRQMESDQKHPITVLPVVDDNHKVVGLIKMHDLVQSGI 319


>gi|312887315|ref|ZP_07746917.1| KpsF/GutQ family protein [Mucilaginibacter paludis DSM 18603]
 gi|311300211|gb|EFQ77278.1| KpsF/GutQ family protein [Mucilaginibacter paludis DSM 18603]
          Length = 311

 Score =  197 bits (502), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 106/270 (39%), Positives = 166/270 (61%), Gaps = 5/270 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   +E I A +G+ V+TGIGKSG IG K+++TL+STGT SFF+H  EA HGDLGM+  D
Sbjct: 27  FSNVIEAILASRGKTVVTGIGKSGLIGKKISATLSSTGTSSFFLHPGEAFHGDLGMVGAD 86

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I++S+SG +DE+  I+ Y +     LI IT +  S +A + +  L +  + E+CP  
Sbjct: 87  DIVILISYSGETDEILKIIPYLKWNGNVLIGITGQPNSTIAKNCNYHLNIAIKHEACPLK 146

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    L +GDA+A+AL+E R F   DF   HPGG LG  L +  S +M + D++P
Sbjct: 147 LAPTSSTTAALVMGDAIAVALMEVRGFQPADFARFHPGGSLGRKLLIRVSSLMRT-DNLP 205

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
            +       + +  +SE R G V ++ E  KL+G++T+GD+ R    + D   L + D+M
Sbjct: 206 YISSKASFTELVLKMSEGRLGMV-IIGEPDKLEGVVTDGDLRRALVTNADTTQLHIRDMM 264

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            +NP V+  +  ++   QL+ +  I+ ++V
Sbjct: 265 TRNPVVVDSEEHVSQVEQLMMERKIATVLV 294


>gi|150025302|ref|YP_001296128.1| arabinose-5-phosphate isomerase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771843|emb|CAL43317.1| Arabinose-5-phosphate isomerase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 307

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/296 (43%), Positives = 178/296 (60%), Gaps = 6/296 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L+  F  AVE I   KGR+V+TGIGKS  I  K+ +T  STGTPS F+HAAEA HGDLGM
Sbjct: 15  LTDDFAKAVEIIYQSKGRLVVTGIGKSAIIAQKMVATYNSTGTPSVFLHAAEAIHGDLGM 74

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +   D++I +S SG+S E+KA++   +RF   LIAIT    S +A  ++ VL    + ES
Sbjct: 75  VQPGDIVICISKSGNSPEIKALIPILKRFGNILIAITGNMTSFLAKESNFVLNTTVDAES 134

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP  LAPT S   QL +GDAL + L+E +NF   DF   HPGG LG  L +  SD++   
Sbjct: 135 CPINLAPTNSTTAQLVMGDALGVCLMEMKNFKSEDFAKYHPGGALGKKLLLRVSDMLDMS 194

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
              P V     + + I  +SEKR G  AVV E +K+ GIIT+GDI R  N +   + L+ 
Sbjct: 195 HK-PTVSPDSSIKNVIFEISEKRLGVTAVV-ENKKIIGIITDGDIRRMLNNNDTFSHLTA 252

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +D+M KNPK I    ++  A  +L    I+ L VV++  +  G++H  D+L+ GI+
Sbjct: 253 KDIMTKNPKTIQYSAMVVDAFNILEDFAITQL-VVENQGEYTGVLHLHDILKEGIV 307


>gi|330981133|gb|EGH79236.1| KpsF/GutQ [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 253

 Score =  197 bits (502), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 106/252 (42%), Positives = 159/252 (63%), Gaps = 3/252 (1%)

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I++T +++S++
Sbjct: 2   SFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMISLTGDSESIL 61

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  DF   HPGG 
Sbjct: 62  AKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAEDFAFSHPGGA 121

Query: 213 LG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG  L +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    L GI T+GD
Sbjct: 122 LGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGTLAGIFTDGD 181

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R   +  D+    +++VM  + K    + L   A++++  + IS L+VVD   + +G 
Sbjct: 182 LRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVVDQNDRPVGA 241

Query: 330 VHFLDLLRFGII 341
            +  DLLR G++
Sbjct: 242 FNLQDLLRAGVM 253


>gi|307625723|gb|ADN70027.1| D-arabinose 5-phosphate isomerase [Escherichia coli UM146]
          Length = 321

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 172/301 (57%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLA+TGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLANTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|161986464|ref|YP_311691.2| D-arabinose 5-phosphate isomerase [Shigella sonnei Ss046]
 gi|323167120|gb|EFZ52838.1| arabinose 5-phosphate isomerase [Shigella sonnei 53G]
          Length = 321

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGT +FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTSAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|34762344|ref|ZP_00143347.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887998|gb|EAA25062.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 323

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 183/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLEMRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I ++D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINQEDIVLAISNSGESDEILAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V++E    L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNEENNILVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + ++ + T A+ ++  R H I+VL V D  +K +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-EKFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|73856749|gb|AAZ89456.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 308

 Score =  197 bits (501), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGT +FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTSAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R       
Sbjct: 188 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGA 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 248 LTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 307

Query: 341 I 341
           I
Sbjct: 308 I 308


>gi|153834335|ref|ZP_01987002.1| sugar isomerase, KpsF/GutQ family [Vibrio harveyi HY01]
 gi|148869260|gb|EDL68278.1| sugar isomerase, KpsF/GutQ family [Vibrio harveyi HY01]
          Length = 307

 Score =  197 bits (500), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/289 (39%), Positives = 170/289 (58%), Gaps = 18/289 (6%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++  +  +F  AV KI+   GRV+I G+GKSG IG K+A++ ASTGTPSFF+H  EA HG
Sbjct: 21  MKDRIGNEFELAVSKIQETTGRVIICGMGKSGIIGKKIAASFASTGTPSFFMHPGEAFHG 80

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA----CHADIVL 160
           DLGM+  +D+ + +S SG +DE+  +L + +     +IAIT + +S +A    CH DI  
Sbjct: 81  DLGMVKPEDIFVAISNSGETDEVLKLLPFLKDNQNYIIAITGKRESTLAKNAHCHLDIA- 139

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVC 219
            +PK  E+CPH LAPT S    L +GDAL +AL+++R FS   F   HPGG LG  L   
Sbjct: 140 -VPK--EACPHQLAPTASTTATLVMGDALTVALMDARGFSPESFARFHPGGSLGRRLLSK 196

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFH- 277
             D MHS  ++P+++      + IT ++E   G V + + E  +   IIT+GD+ R    
Sbjct: 197 VRDEMHS--TLPIIEPNAAFTNVITAITEGALGLVLLKMPESWE---IITDGDVRRAMES 251

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
             KD+  L   D+  K P V+  +  + +A +L+ Q  I+ L+V DD Q
Sbjct: 252 KGKDVFDLKASDISSKQPAVVSANANIQLAFELMEQKRITSLLVEDDGQ 300


>gi|237744560|ref|ZP_04575041.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           7_1]
 gi|229431789|gb|EEO42001.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           7_1]
          Length = 323

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIIPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKANTSMEDIVILMSEKKLGVVCVMNDENNVLVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M  N   + ++ + T A+ ++  R H I+VL V D   + +G++ 
Sbjct: 257 LRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-DEFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|78484848|ref|YP_390773.1| KpsF/GutQ family protein [Thiomicrospira crunogena XCL-2]
 gi|78363134|gb|ABB41099.1| capsule expression protein [Thiomicrospira crunogena XCL-2]
          Length = 311

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 171/290 (58%), Gaps = 8/290 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  +V+ I A +GRVVI G+GKSG IG K+ +TLASTGTP FF+H  EA HGDLGM
Sbjct: 25  LDENFSQSVDAILATEGRVVICGMGKSGLIGKKIMATLASTGTPCFFMHPGEAFHGDLGM 84

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           ++  D+ I LS SG ++E+  ++ + +     +I++T    S +A +++  L +    E+
Sbjct: 85  VSPKDVFIALSNSGETEEVIKLIPFLKDNGNTIISMTGRPDSTLAKNSNFHLNIAVPQEA 144

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           CPH LAPT+S    L +GDALA+AL+E R+F   DF   HPGG LG   +         +
Sbjct: 145 CPHQLAPTSSTTATLVMGDALAVALMEKRDFQPQDFARFHPGGSLGRKLLTRVKHEMKSE 204

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SV 285
           ++P V+    + D I  +++ R G + +V++G+   GIIT+GD+ R   +D       + 
Sbjct: 205 NLPFVEKSASMKDVIHTMTDGRLG-LCIVNQGE---GIITDGDLRRQMEEDPANFMQKTA 260

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D+M  +PK+I  +  L+ A +++ Q  I+ L+V D  Q  +G++   DL
Sbjct: 261 GDIMGTHPKMIDSEARLSDAEEMMTQKKITSLLVSDQNQ-VVGVIQIYDL 309


>gi|296328875|ref|ZP_06871386.1| KpsF/GutQ family sugar phosphate isomerase involved in capsule
           formation [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153996|gb|EFG94803.1| KpsF/GutQ family sugar phosphate isomerase involved in capsule
           formation [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 323

 Score =  197 bits (500), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I ++D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINQEDIVLAISNSGESDEILAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNDENNILVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + +  + T A+ ++  R H I+VL V D+  K +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKGEMATQALSIMEDRPHQINVLPVFDN-DKFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|260911762|ref|ZP_05918335.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634121|gb|EEX52238.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 273

 Score =  196 bits (499), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 107/271 (39%), Positives = 173/271 (63%), Gaps = 7/271 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSG+IG+K+A+TL+STGTP+FF++  +  HGDLG++T DD+++ LS SG +DE
Sbjct: 1   MIVTGVGKSGNIGAKIAATLSSTGTPAFFINPLDVYHGDLGVMTADDVVLALSNSGQTDE 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   +       +PLI ++    S++A ++   +T+  + E+CP  LAPT+S    LA+G
Sbjct: 61  LLRFIPAILHRGVPLIGMSRNPNSLLAKYSVAHITVKVDKEACPLNLAPTSSTTAALAMG 120

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           DALA+AL++ RNF   DF   HPGG+LG  L   A+DVM   D +P++     L DAI  
Sbjct: 121 DALAVALMQVRNFKPTDFARFHPGGELGKRLLTTAADVMRV-DDLPVIPRQMHLGDAIIH 179

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLL 302
           +S+ + G    V++G K+ G+IT+GDI R   K   +    +V D+M  NPK++   T +
Sbjct: 180 VSKGKLGLGVSVEDG-KIVGLITDGDIRRAMEKWQAEFFNKTVNDIMTTNPKIVSPTTKI 238

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIV-HF 332
               Q+++++ I  ++V D+  + +GIV H+
Sbjct: 239 ADIQQIMQKYKIHTVLVADEDARLVGIVDHY 269


>gi|90406834|ref|ZP_01215026.1| GutQ protein [Psychromonas sp. CNPT3]
 gi|90312071|gb|EAS40164.1| GutQ protein [Psychromonas sp. CNPT3]
          Length = 318

 Score =  196 bits (498), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/288 (38%), Positives = 176/288 (61%), Gaps = 7/288 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  ++  A++ +K+  GR+++ G+GKSGHIG K+++TLAS GTPSFF+H  EA HGDLGM
Sbjct: 32  LGTEYLDALDLMKSCTGRIIVCGMGKSGHIGKKISATLASVGTPSFFMHPGEAFHGDLGM 91

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           IT +DL++++S+SG +DE+  I+   + F   +I+IT    S +A ++D+VL    + E+
Sbjct: 92  ITTEDLLLLISYSGETDEVLKIIPSLQHFGNKIISITGAKDSTLAKNSDVVLVAAIQKET 151

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT--LFVCASDVMHS 226
           CP  LAPTTS  + L IGDAL+  L   ++F+  DF   HPGG LG   L    +++ H 
Sbjct: 152 CPINLAPTTSTTLTLVIGDALSSVLTLEKHFTPMDFARFHPGGSLGKRLLTFVRNEMRH- 210

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLS 284
            +++P VK    L D + ++++ R G   V+ E   L+G+IT+GD+ R     K ++   
Sbjct: 211 -ENLPFVKTDTSLTDILLVMTQTRTGLALVMHEDH-LQGVITDGDLRRFMLSGKSVHETI 268

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             D+M  NP  I  +  L+ A  L+R+ +I  L+V  + +   GI+ +
Sbjct: 269 ASDLMNSNPCFISPNARLSEAEDLMREKHIKWLIVSANEKDIEGIIEW 316


>gi|329905838|ref|ZP_08274226.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547478|gb|EGF32294.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 349

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/280 (44%), Positives = 167/280 (59%), Gaps = 3/280 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRVV++GIGKSGHI  K+A+TLASTGTPS FVH AEA+HGDLGMI   D+ + +S SG +
Sbjct: 70  GRVVVSGIGKSGHIARKIAATLASTGTPSLFVHPAEAAHGDLGMIGPQDVFVAISNSGET 129

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL AI+   +R    L+ +T  + S +A  A + L +  + E+CP  LAPTTS    LA
Sbjct: 130 AELMAIVPSIKRMGAVLVTMTGNDASSLARLATVHLNVAVDKEACPLNLAPTTSTTAALA 189

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R F   DF   HPGG LG  L     DVM SG  IP V     L  A+
Sbjct: 190 LGDALAVALLDARGFRAEDFARSHPGGALGRRLLTHVRDVMRSGGEIPAVLATVSLSQAL 249

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTL 301
             ++ K     AVVDE  +  G+ T+GD+ R     +D   L+V DVM  +P+ I  D L
Sbjct: 250 AEMTRKGMAMTAVVDESFRPIGVFTDGDLRRLIEHVQDFTRLTVADVMHSDPRTIGPDQL 309

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              A+Q++ +  I+ L+V D     +G +H  DL R  +I
Sbjct: 310 AVDAVQVMEELRINQLLVADAAGMLVGALHIHDLTRAKVI 349


>gi|294785514|ref|ZP_06750802.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 3_1_27]
 gi|294487228|gb|EFG34590.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 3_1_27]
          Length = 323

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNDENNVLVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M  N   + ++ + T A+ ++  R H I+VL V D   + +G++ 
Sbjct: 257 LRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-DEFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|116329828|ref|YP_799546.1| sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123517|gb|ABJ74788.1| Sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 322

 Score =  196 bits (498), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/293 (39%), Positives = 180/293 (61%), Gaps = 11/293 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E I   KG++++TG+GKSG +G K++STL+STGTPS F+H A+A+HGD G+I+ +D+I
Sbjct: 33  AIELILQSKGKLIVTGVGKSGDVGKKISSTLSSTGTPSIFLHPADAAHGDAGIISIEDVI 92

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +  SG S+EL  ++   +     LI++T+  +S +A  +DIVL  P   E+CP  LAP
Sbjct: 93  IAIGKSGESEELLNLIPTIKNIGAKLISMTANVESKLAKESDIVLITPVLKEACPLELAP 152

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T+S  + L +GDA+A+ L+E +NF + +F + HP G+LG  L +   DVM +G  +  V 
Sbjct: 153 TSSTTIALILGDAIAMCLMELKNFKKENFALYHPAGRLGKRLSLKIEDVMRNGKDLAKVL 212

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKN 292
               L D +T ++ KR G   V D   KL GIIT+ DI +   +    +++S E +M  N
Sbjct: 213 PDAKLEDILTEITVKRQGATGVTDLSGKLLGIITDFDIRKKLKEGKLDSSISAEQLMNPN 272

Query: 293 PKVILEDTLLTVAMQLLRQ-----HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P +       + A ++LRQ     + ISV  +VD+ +K IGIV   DLL+ G+
Sbjct: 273 PTMFQSG---SNAYEVLRQMESRPNPISVAPIVDNSKKLIGIVSVHDLLQKGL 322


>gi|116329513|ref|YP_799233.1| sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122257|gb|ABJ80300.1| Sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 322

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 118/293 (40%), Positives = 180/293 (61%), Gaps = 11/293 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E I   KG++++TG+GKSG +G K++STL+STGTPS F+H A+A+HGD G+I+ +D+I
Sbjct: 33  AIELILQSKGKLIVTGVGKSGDVGKKISSTLSSTGTPSIFLHPADAAHGDAGIISIEDVI 92

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +  SG S+EL  ++   +     LI++T+  +S +A  +DIVL  P   E+CP  LAP
Sbjct: 93  IAIGKSGESEELLNLIPTIKNIGAKLISMTANVESKLAKESDIVLITPVLKEACPLELAP 152

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T+S  + L +GDA+A+ L+E +NF + +F + HP G+LG  L +   DVM +G  +  V 
Sbjct: 153 TSSTTIALILGDAIAMCLMELKNFKKENFALYHPAGRLGKRLSLKIDDVMRNGKDLAKVL 212

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKN 292
               L D +T ++ KR G   V D   KL GIIT+ DI +     K  +++S E +M  N
Sbjct: 213 PDAKLEDILTEITVKRQGATGVTDLSGKLLGIITDFDIRKKLKEGKLDSSISAEQLMNPN 272

Query: 293 PKVILEDTLLTVAMQLLRQ-----HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P +       + A ++LRQ     + ISV  +VD+ +K IGIV   DLL+ G+
Sbjct: 273 PTMFQSG---SNAYEVLRQMESRPNPISVAPIVDNSKKLIGIVSVHDLLQKGL 322


>gi|119897085|ref|YP_932298.1| sugar-phosphate isomerase [Azoarcus sp. BH72]
 gi|119669498|emb|CAL93411.1| sugar-phosphate isomerase [Azoarcus sp. BH72]
          Length = 331

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 127/288 (44%), Positives = 170/288 (59%), Gaps = 3/288 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AVE I    GRV++TGIGKSGHI  KLA+TLASTGTP++FVHAAEA+HGDLGMIT 
Sbjct: 39  DFERAVELILGRSGRVIVTGIGKSGHIARKLAATLASTGTPAYFVHAAEAAHGDLGMITP 98

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D++I LS SG+S+EL  I+   +R    LIA+T    S +A  AD+ L      E+CP 
Sbjct: 99  EDVVIALSNSGASEELLMIVPLVKRQGARLIALTGRPDSPLAREADVHLDGAVSEEACPL 158

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            LAPT S    LA+GDALA+ALL++R F  +DF   HPGG LG  L    SDVM     +
Sbjct: 159 NLAPTASTTAALALGDALAVALLDARGFGPDDFARSHPGGSLGRRLLTHVSDVMRPAPEV 218

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P+V     L +A+  ++    G   V D   +  GI T+GD+ R   K  D+    + D+
Sbjct: 219 PVVGREAALAEALLAMTRGGMGMTVVADPDGRPLGIFTDGDLRRALEKGIDVRAARIADL 278

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M   P+ I  D L   A +++ +  IS L+V+D   K  G +   DL+
Sbjct: 279 MTPQPRHISPDALAAEAAEVMERQRISQLLVLDAAGKLAGALTTHDLM 326


>gi|56751818|ref|YP_172519.1| hypothetical protein syc1809_d [Synechococcus elongatus PCC 6301]
 gi|81301100|ref|YP_401308.1| KpsF/GutQ family protein [Synechococcus elongatus PCC 7942]
 gi|56686777|dbj|BAD79999.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169981|gb|ABB58321.1| KpsF/GutQ family protein [Synechococcus elongatus PCC 7942]
          Length = 323

 Score =  196 bits (497), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 171/292 (58%), Gaps = 7/292 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A + I    G+VV++G+GKSG I  K+ +TL S GT S F+H  +A HGDLG++T  D++
Sbjct: 32  ATQLIANCSGKVVLSGVGKSGIIARKITATLLSIGTLSAFLHPCDALHGDLGIVTEQDVV 91

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           ++LS SG +DEL A+L + +R  +P+IAI    +S +A  A  VL    + E+CP  LAP
Sbjct: 92  VMLSNSGETDELLAMLPHLQRRQVPIIAIVGNMRSTLARVAAAVLDASVDREACPLNLAP 151

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T S  + LAIGDALA  +++ R+ +   F   HP G+LG  L +   DVMH G+ +PL+ 
Sbjct: 152 TASTTVALAIGDALAAQVMDYRSVTSEQFAFNHPAGRLGKRLTLKVVDVMHQGEELPLLP 211

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
                ++ +T +S    G V +V+   +L G+IT+GD+ R   +     L+ ++  + M 
Sbjct: 212 PEARFVEVVTAISRGGLGAVPIVEADGRLLGLITDGDLRRLLEQTSPAKLDQITAAEFMT 271

Query: 291 KNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             P  +  D L   A+ L+  R   ISVL VVD  Q+ +G+V   DL+R GI
Sbjct: 272 PQPIAVEGDLLAYDALHLMENRPSQISVLPVVDAAQRCLGLVRIHDLIRSGI 323


>gi|256845181|ref|ZP_05550639.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium sp. 3_1_36A2]
 gi|256718740|gb|EEU32295.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium sp. 3_1_36A2]
          Length = 323

 Score =  195 bits (496), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 121/306 (39%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IAIT    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEIIAIMPAIKNIGAYIIAITGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V++E    L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNEENNILVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + ++ + T A+ ++  R H I+VL V D   K +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-DKFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|149199216|ref|ZP_01876254.1| arabinose-5-phosphate isomerase [Lentisphaera araneosa HTCC2155]
 gi|149137641|gb|EDM26056.1| arabinose-5-phosphate isomerase [Lentisphaera araneosa HTCC2155]
          Length = 309

 Score =  195 bits (496), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/301 (38%), Positives = 178/301 (59%), Gaps = 11/301 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           EK GL  +      +L   F  +V  I + KGR ++ G+GKSG IG K+A++ ASTGTPS
Sbjct: 14  EKDGLCHVSK----QLDVNFEQSVTSILSSKGRTIVCGMGKSGIIGKKIAASFASTGTPS 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T+DD+ I +S SG +DE+  +L + +  S  ++A+T  + S +A
Sbjct: 70  FFMHPGEAFHGDLGMVTKDDVFIAISNSGETDEVLKLLPFLKDNSNIIVAMTGNSNSTLA 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            +A   L +  E E+CP  LAPT S    LA+GDAL IAL++SR F   +F   HPGG L
Sbjct: 130 QNAHYHLNIGVEKEACPLQLAPTASTTATLAMGDALTIALMQSRKFKPENFARFHPGGSL 189

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     D M + + +P+V     + D I +++E  +G   VV   Q L G++T+GD+
Sbjct: 190 GRKLLNKVQDEMQTIN-LPIVTDDLAVKDLIQVITECMYGLAIVVKRNQ-LIGLVTDGDL 247

Query: 273 ---FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              F  F K++   S +D+M  +PK I     +  A++ +  + I+ ++V++D +  +GI
Sbjct: 248 RRSFEKFGKNVFDKSTKDIMSHSPKTISPLVSMQKAIEFMESYQINNIIVIEDSE-VVGI 306

Query: 330 V 330
           +
Sbjct: 307 L 307


>gi|189218675|ref|YP_001939316.1| Arabinose 5-phosphate isomerase and CBS domains [Methylacidiphilum
           infernorum V4]
 gi|189185533|gb|ACD82718.1| Arabinose 5-phosphate isomerase and CBS domains [Methylacidiphilum
           infernorum V4]
          Length = 325

 Score =  195 bits (495), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/297 (38%), Positives = 175/297 (58%), Gaps = 6/297 (2%)

Query: 45  LQGELSFQFHCAV---EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
           ++ +L+  F  A+   EK     G++V+TG+GKSGHIG K+A+TL STG PS  + A  A
Sbjct: 23  VRKQLNAAFEQAILVLEKTILANGKIVVTGVGKSGHIGRKIAATLTSTGAPSVVLDAVNA 82

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGM+ R D ++ LS+SG ++E+  ++ + +R +  LIAIT    S +A ++D+VL+
Sbjct: 83  FHGDLGMVNRGDAVVALSYSGETEEILRLVPHLKRMTTSLIAITGNENSTLAKNSDLVLS 142

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  + E+CP  LAPT+S    L +GDALA+ LLE R F + DF   HPGG LG  L +  
Sbjct: 143 VRIDREACPLNLAPTSSTTAMLVLGDALAMVLLEKRGFKKEDFARFHPGGTLGRNLLLKV 202

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
            D+M     I +++    + +A+ + + KR G V VV+ G K+ GI T GD  RN+  + 
Sbjct: 203 GDIMRPLSQIVILEEEAKVKEALRLWNVKRVGAVVVVNPGGKVIGIFTHGDFVRNYEVNH 262

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +    +  VM KNP  +  D L    + +   + I  L+VVD+  + +G++   DL
Sbjct: 263 RIGEEPLGKVMTKNPVTVRVDKLAVEVLNVFEHNKIEDLIVVDEQYRVVGLIDSQDL 319


>gi|297621939|ref|YP_003710076.1| carbohydrate isomerase, KpsF/GutQ family [Waddlia chondrophila WSU
           86-1044]
 gi|297377240|gb|ADI39070.1| carbohydrate isomerase, KpsF/GutQ family [Waddlia chondrophila WSU
           86-1044]
          Length = 323

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/284 (39%), Positives = 168/284 (59%), Gaps = 7/284 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG  V TG+GKSG +  K+A T+ STGT + ++    A HGD+G++  DDL IVLS SG 
Sbjct: 40  KGITVFTGVGKSGLVAKKMAVTMTSTGTRALYLSPTNALHGDIGILKPDDLFIVLSKSGE 99

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           SDEL  ++ + R   + +++I S   S +A  +DIVL +  E E CP  +APTTS  +Q 
Sbjct: 100 SDELMNLIPFIRNQGVKVVSIVSNQDSRLAKASDIVLFISPERELCPFDMAPTTSTTIQG 159

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GD LAIAL+  +  S  DF   HP G+LG    +   D+M  GD++P+ K    L+D+
Sbjct: 160 IVGDVLAIALMRLKKVSIEDFVKSHPAGRLGKRATILVKDLMLKGDAVPVGKGDDKLVDS 219

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILED 299
           +  LS K+ GCV +VD+ +++KGI T+GD+ R   K   D     +E +M K P+ I  +
Sbjct: 220 LVELSNKQCGCVIIVDDDRRMKGIFTDGDLRRALQKYGVDALESPLERLMTKTPRSISPN 279

Query: 300 TLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L   A++ +  +    I +L V+D+  + +G+V   DLL+ GI
Sbjct: 280 MLAYAAVKEMESNQKSPIMILPVLDEEGRVVGVVKMHDLLQAGI 323


>gi|224437070|ref|ZP_03658051.1| hypothetical protein HcinC1_03840 [Helicobacter cinaedi CCUG 18818]
 gi|313143543|ref|ZP_07805736.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128574|gb|EFR46191.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 323

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/293 (37%), Positives = 178/293 (60%), Gaps = 6/293 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +    VEKI   +G++V+ G+GKSG IG K+++TL+STGTPS F+H  EA HGDLGM+ +
Sbjct: 32  ELEAIVEKIFHSRGKLVVCGVGKSGLIGVKISATLSSTGTPSVFLHPTEALHGDLGMLQK 91

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD+++ +S+SG S+EL +I+ + +RF   +I ++ +  S ++   D  L +  + E+CP 
Sbjct: 92  DDILLAISYSGKSEELLSIIPHIKRFGNTIITMSRDKLSPLSALGDYFLDISIKREACPL 151

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
            +APT+S  + LA+GD LA+ L++ R F   +F   HPGG LG  LFV   D+M + D +
Sbjct: 152 NIAPTSSTTLTLALGDVLAVCLMKRRAFKAENFASFHPGGALGKQLFVKLKDLMQTQD-L 210

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDV 288
           P++    PL  AI I+S+KR G  A++ +   + GI+++GD+ R   K   +L   V   
Sbjct: 211 PIIPPEMPLSQAIIIMSQKRLGN-AIIAKDNVIWGILSDGDLRRAMMKQDFSLESQVGAY 269

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +NPKV    D L   A++++  + I +L++ D  +   G +H   L+  G+
Sbjct: 270 ATQNPKVCDTPDILAYDALKMMEDNKIQLLVITDKHRHIQGAIHLHTLISAGL 322


>gi|323188880|gb|EFZ74165.1| arabinose 5-phosphate isomerase [Escherichia coli RN587/1]
          Length = 321

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/301 (39%), Positives = 171/301 (56%), Gaps = 2/301 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            +M   D+IP V +   ++ A+  LS    G VAV D+ + +KG+ T+GD+ R       
Sbjct: 201 HLMRRDDAIPQVALTASVMVAMLELSRTGLGLVAVCDDQRLVKGVFTDGDLRRWLVGGGA 260

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GI
Sbjct: 261 LTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGI 320

Query: 341 I 341
           I
Sbjct: 321 I 321


>gi|258648426|ref|ZP_05735895.1| arabinose 5-phosphate isomerase [Prevotella tannerae ATCC 51259]
 gi|260851174|gb|EEX71043.1| arabinose 5-phosphate isomerase [Prevotella tannerae ATCC 51259]
          Length = 316

 Score =  194 bits (494), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/287 (39%), Positives = 172/287 (59%), Gaps = 6/287 (2%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            ++  F  AVE I    G++++TG+GKSGHIG+K+A+TL+STGTPSFFV+  +  HGDLG
Sbjct: 25  NINADFDKAVELILQCSGKLIVTGVGKSGHIGAKIAATLSSTGTPSFFVNPLDVFHGDLG 84

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +IT++D+++ LS SG +DEL   L Y     IP+I +T   KS +A ++ + L      E
Sbjct: 85  VITKEDVVLALSNSGQTDELLRFLPYLLEQKIPVIGMTGNPKSPLAQNSTVHLNAAVAKE 144

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           + P GLAPT+S    LA+GDALA AL+++R+F  +DF   HPGG LG  L   A D+M +
Sbjct: 145 AGPLGLAPTSSTTAALAMGDALACALMDARDFKASDFAQFHPGGTLGRRLLTKAKDIMRT 204

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--- 283
            D +P++     L +A+  +S  R G     +EG K+ GIIT+GDI R      +     
Sbjct: 205 ED-LPVISPTMLLGEAVIHVSNGRLGLCVAQEEG-KIVGIITDGDIRRAIQASRDNFFQT 262

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V +VM + PK +  +  ++    +L  + I  ++V     + +GIV
Sbjct: 263 TVAEVMTRTPKTVSPEAKVSEIESILNTNKIHCVLVTAPDGRLLGIV 309


>gi|294782628|ref|ZP_06747954.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 1_1_41FAA]
 gi|294481269|gb|EFG29044.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 1_1_41FAA]
          Length = 323

 Score =  194 bits (493), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +I +T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAFVIGMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    + E CP  LAP +S    L +GDA+A  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ D+   L GIITEGDI R 
Sbjct: 197 LTKVGNLMKTGEALALCKANTSMEDIVILMSEKKLGVVCVMNDDNSLLVGIITEGDIRRA 256

Query: 276 F-HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK+   +L   D+M  N   + ++ + T A+ ++  R H I+VL V DD    +G++ 
Sbjct: 257 LSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDD-NNFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|254303286|ref|ZP_04970644.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323478|gb|EDK88728.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 323

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEIIAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNDENNVLVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + ++ + T A+ ++  R H I+VL V D   + +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRPHQINVLPVFDK-DEFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|283778635|ref|YP_003369390.1| KpsF/GutQ family protein [Pirellula staleyi DSM 6068]
 gi|283437088|gb|ADB15530.1| KpsF/GutQ family protein [Pirellula staleyi DSM 6068]
          Length = 365

 Score =  194 bits (492), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/306 (39%), Positives = 167/306 (54%), Gaps = 19/306 (6%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   L   F  AV+ +   +G ++++G+GK+G I SKL +T ASTGT S FVH AEA 
Sbjct: 33  AGLATRLDHHFVSAVKMLLDCRGSLILSGMGKAGLIASKLTATFASTGTRSHFVHPAEAI 92

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLG I   D++++LS+SG ++E+  IL   R F   +IAIT +  S +A  A +VL L
Sbjct: 93  HGDLGRIAEGDVVLMLSYSGETEEITRILPMLRDFGASIIAITGQPSSTLARAATVVLDL 152

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
            +  E+CP GLAP+TS    LA+GDALAI + +SR FS +DF   HPGG LG      +D
Sbjct: 153 GRITEACPLGLAPSTSTAAMLALGDALAIVVSQSRGFSADDFARYHPGGSLGRKLATVND 212

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSE---------KRFGCVAVVDEGQKLKGIITEGDIF 273
           VM      PL +  C +      L E         +R G + ++D+  KL GI T+ D+ 
Sbjct: 213 VMR-----PLAE--CRVAHENERLREALVNQRRPGRRSGAILLIDDAGKLSGIFTDSDLA 265

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      + DVM + P  I E T L  A  LL    IS L V+D   K  G+V
Sbjct: 266 RLLEAKRDAAIDGPLSDVMTRRPTTIQEGTSLAAACDLLAMKKISELPVIDHDGKPAGLV 325

Query: 331 HFLDLL 336
              D++
Sbjct: 326 DITDVV 331


>gi|298530536|ref|ZP_07017938.1| KpsF/GutQ family protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509910|gb|EFI33814.1| KpsF/GutQ family protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 327

 Score =  193 bits (491), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 180/301 (59%), Gaps = 8/301 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +++ +L   F  A+E++ A  GR+V+TG+GKSG IG K+A+T +STG+P+FF+H  E +H
Sbjct: 24  AVRDDLDEAFSSAMEEMSACSGRIVLTGVGKSGLIGRKMAATFSSTGSPAFFLHPVEGAH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GD+GM+  +DL++ +S SG ++E+ +IL       I ++A+T++  S +A  AD+V+ + 
Sbjct: 84  GDMGMLRSEDLVVAISNSGETEEVNSILQSISSLGIRIVALTADTGSTMARLADVVVRVK 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASD 222
              E+C  GLAPT+S    LA+GDA+AIAL++S++F + DF   HPGG LG  L      
Sbjct: 144 VPREACSLGLAPTSSTTAVLAVGDAMAIALMQSKHFGKKDFQRYHPGGFLGQRLRQGIHR 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +MH+  ++PL +    L +A+ ++++  FG V +     +L G+IT+GD+ R      N 
Sbjct: 204 LMHT-SALPLAREDESLENALEVMNQGGFGVVFITSGDNRLAGVITDGDVRRMVCG--NN 260

Query: 283 LSVEDV----MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + D     MI +P            + ++ +  I+VL +VD   +  G+VH  DLL  
Sbjct: 261 WRLSDPAGLHMISSPVHANPGQSAASVLDVMEEKAITVLPIVDHENRIKGLVHLHDLLGK 320

Query: 339 G 339
           G
Sbjct: 321 G 321


>gi|220909564|ref|YP_002484875.1| KpsF/GutQ family protein [Cyanothece sp. PCC 7425]
 gi|219866175|gb|ACL46514.1| KpsF/GutQ family protein [Cyanothece sp. PCC 7425]
          Length = 333

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 177/298 (59%), Gaps = 7/298 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S Q   A+  ++  +G+V++ G+GKSG +G K+A+T+ STGT + ++H ++A HGDLGM+
Sbjct: 36  SDQVEQAIALLQNCQGKVIVLGMGKSGIVGQKIAATMTSTGTVAIYLHPSDALHGDLGMV 95

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
              D+ I+LS SG ++EL  IL Y     +P+IAI     S +A  AD+VL    + E+C
Sbjct: 96  AAADVAILLSNSGQTEELLQILPYLHHRQVPIIAIVGNLGSPLARKADVVLDASVDREAC 155

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGD 228
           P  LAPTTS  + LAIGDAL++AL +++N +   F + HP G LG  L +    +M SG 
Sbjct: 156 PLNLAPTTSTTVALAIGDALSMALAKAKNLTPEAFAMNHPAGSLGRRLTLRVRHLMQSGA 215

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLS 284
           + P V     L++ I  L+    G V VVD    L G+IT+GD+ R   +     L+T+ 
Sbjct: 216 ANPTVDHRASLVEIIAALTRGSCGAVNVVDPQGHLLGLITDGDLRRVLQRMSLDRLDTVD 275

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +M  NP V+  D L   A++L+  R   I+VL VVD  ++++GIV   D+++ G+
Sbjct: 276 CAMMMTPNPVVVEPDCLAYDALKLMEERASPIAVLPVVDQERRSVGIVRLHDIVQSGL 333


>gi|262068225|ref|ZP_06027837.1| arabinose 5-phosphate isomerase [Fusobacterium periodonticum ATCC
           33693]
 gi|291378093|gb|EFE85611.1| arabinose 5-phosphate isomerase [Fusobacterium periodonticum ATCC
           33693]
          Length = 323

 Score =  193 bits (490), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +I +T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAFVIGMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    + E CP  LAP +S    L +GDA+A  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V++E    L GIITEGDI R 
Sbjct: 197 LTKVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNEDNSLLVGIITEGDIRRA 256

Query: 276 F-HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK+   +L   D+M  N   + ++ + T A+ ++  R H I+VL V D+    +GI+ 
Sbjct: 257 LSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDE-NNFVGIIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|19704238|ref|NP_603800.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714466|gb|AAL95099.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 323

 Score =  192 bits (489), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 119/306 (38%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGACIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ +NFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLKNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + + + ++SEK+ G V V+ DE   L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEEIVILMSEKKLGVVCVMNDENNILIGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + ++ + T A+ ++  R H I+VL V D+  K +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRPHQINVLPVFDN-DKFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|237740270|ref|ZP_04570751.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           2_1_31]
 gi|229422287|gb|EEO37334.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           2_1_31]
          Length = 323

 Score =  192 bits (487), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/306 (38%), Positives = 182/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAFVIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    + E CP  LAP +S    L +GDA+A  L++ R+F+  +F + HPGG LG  L
Sbjct: 137 LYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLRDFTPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V+ D+   L GIITEGDI R 
Sbjct: 197 LTKVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNDDNSLLVGIITEGDIRRA 256

Query: 276 F-HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK+   +L   D+M  N   + ++ + T A+ ++  R H I+VL V DD    +G++ 
Sbjct: 257 LSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRPHQINVLPVFDD-NNFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|237741845|ref|ZP_04572326.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           4_1_13]
 gi|229429493|gb|EEO39705.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           4_1_13]
          Length = 323

 Score =  192 bits (487), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/306 (38%), Positives = 181/306 (59%), Gaps = 8/306 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G IG K+++T ASTGT S F++
Sbjct: 18  IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGIIGKKISATFASTGTTSIFMN 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           + E  HGDLG+I  +D+++ +S SG SDE+ AI+   +     +IA+T    S +A  +D
Sbjct: 77  STEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNIGAYIIAMTGNINSRLAKASD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TL 216
           + +    E E CP  LAP +S    L +GDALA  L++ RNFS  +F + HPGG LG  L
Sbjct: 137 LYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLIKLRNFSPQNFAMYHPGGSLGRKL 196

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRN 275
                ++M +G+++ L K    + D + ++SEK+ G V V++E    L GIITEGDI R 
Sbjct: 197 LTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCVMNEENNILVGIITEGDIRRA 256

Query: 276 F-HK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
             HK +   L  +D+M      + ++ + T A+ ++  R H I++L V D   + +G++ 
Sbjct: 257 LSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRPHQINILPVFDK-DEFVGVIR 315

Query: 332 FLDLLR 337
             DLL+
Sbjct: 316 IHDLLK 321


>gi|313648188|gb|EFS12633.1| arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
          Length = 273

 Score =  191 bits (486), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 111/273 (40%), Positives = 159/273 (58%), Gaps = 2/273 (0%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSGHIG K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I
Sbjct: 1   GIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLI 60

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +      SI L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA
Sbjct: 61  IPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALA 120

Query: 191 IALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +A++++R F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS  
Sbjct: 121 MAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRT 180

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
             G VAV D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++
Sbjct: 181 GLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEV 240

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 241 LMKRKITAAPVVDENGKLTGAINLQDFYQAGII 273


>gi|299139550|ref|ZP_07032724.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX8]
 gi|298598478|gb|EFI54642.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX8]
          Length = 384

 Score =  191 bits (485), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/312 (37%), Positives = 170/312 (54%), Gaps = 12/312 (3%)

Query: 34  EKRGLSSLESSLQGELSFQF-HCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           E + L  L   L G     F H A    EK +A   R V+TG+GKSG IG K+A+TL ST
Sbjct: 48  EAQALLELAGRLDGPQLRAFDHVAGLLAEKARAGH-RTVVTGVGKSGLIGRKIAATLVST 106

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTP+ F+H  EA HGDLG++   D+++ LS+SG ++EL  +L    R  + LI+      
Sbjct: 107 GTPAQFLHPGEALHGDLGILNHGDILLALSYSGETEELLRLLPVLSRLGVTLISFCGCPT 166

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  +   L +    E+C H LAPT S    LA+GDALAI +    +F   DF  LHP
Sbjct: 167 STLATSSAYTLDVSVSREACNHQLAPTASTTAMLALGDALAIDVSRRLHFKARDFAELHP 226

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG+LG        +MHSGD++P V    P+ + I  +S KR G   V   G+ L G++++
Sbjct: 227 GGQLGRRLATVKQLMHSGDALPQVPPAAPMTEIIHEMSAKRLGMTTVQKNGE-LLGVLSD 285

Query: 270 GDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---C 323
           GD+ R   +D       +  +VM  +P++I  +     A+ L+ QH I+ L+V +D    
Sbjct: 286 GDLRRLLERDGPGAFHKTAAEVMNPHPRLIAPEPFAVDALALMEQHKITALVVTEDGTVT 345

Query: 324 QKAIGIVHFLDL 335
              +G++H  DL
Sbjct: 346 SPVLGVLHLHDL 357


>gi|330819904|ref|YP_004348766.1| KpsF/GutQ family protein [Burkholderia gladioli BSR3]
 gi|327371899|gb|AEA63254.1| KpsF/GutQ family protein [Burkholderia gladioli BSR3]
          Length = 311

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/310 (35%), Positives = 174/310 (56%), Gaps = 9/310 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + + + ++ A +    E R L+ + + L       F  AVE I A  GR+V+ G+GKSG 
Sbjct: 1   MTRQNHLESARQVFDIESRALAGVAARLDA----SFEQAVELILASNGRLVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TL+STGTP+FF+H  EA HGDLGM+T  D+ + +S SG +DE+  ++ + R  
Sbjct: 57  VGRKIAATLSSTGTPAFFMHPGEAYHGDLGMVTPGDVFLAISNSGETDEVIKLIPFLRGN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LIA+T  + S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R
Sbjct: 117 GNVLIALTGNSASTLARAARLHLDVGVEREACPLQLAPTASTTATLAMGDALAVTLMRAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F    F   HPGG LG   +C  D   + +++P V    P +D +  ++  R G +A+V
Sbjct: 177 GFQPEHFARFHPGGSLGRRLLCTVDDEMARENLPFVNEDTPTLDVLDAMTHGRLG-LAIV 235

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                  GI+T+GDI R   +  + +   +  D+M   P  +   T +  A+ L++Q  I
Sbjct: 236 RRVLGW-GIVTDGDIRRAIERHGDAVLRRTAADMMSIAPSTVRPGTRIEDALLLMQQQGI 294

Query: 315 SVLMVVDDCQ 324
             L+V+D C+
Sbjct: 295 GALLVIDGCE 304


>gi|257463606|ref|ZP_05627997.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
 gi|317061160|ref|ZP_07925645.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
 gi|313686836|gb|EFS23671.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
          Length = 322

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/316 (37%), Positives = 179/316 (56%), Gaps = 17/316 (5%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLA 87
           I  E +GL  L+ S+  EL       +E  K I   +G+++ITGIGK+G IG K+A+TL+
Sbjct: 15  IDTEIQGLEKLKKSMGREL-------IEAAKTIYESRGKLIITGIGKTGAIGRKIAATLS 67

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT + F+++ E  HGDLGM+  +D++I +S SG SDE+  I+   +     + A+T  
Sbjct: 68  STGTTTIFMNSTEGLHGDLGMVNPEDIVIGISNSGESDEILHIIPAIKNIGAKVFAMTGN 127

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  A+IVL    E E CP  LAP  S    LA+GDALA  L+  RNF   +F + 
Sbjct: 128 PNSRLAQEAEIVLFCGVESEGCPLNLAPMASTTSALALGDALAGVLMRMRNFQPQNFAMY 187

Query: 208 HPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG LG  L     ++M +G+ + L      + D I  ++EKR G + V+ E +KL GI
Sbjct: 188 HPGGSLGRRLLSRVKNLMKTGEDLALCSPNTKMKDVILKMNEKRLGILCVM-ENEKLVGI 246

Query: 267 ITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDD 322
           ITEGDI R   ++    T   E++M K  K + +D L   A+  + +  + ISV+ V  +
Sbjct: 247 ITEGDIRRALSREEEFFTFRAEEIMTKKYKKVEQDMLANEALSYMEEGKYQISVMPVFHE 306

Query: 323 CQKAIGIVHFLDLLRF 338
            +  +G+V   DLL+ 
Sbjct: 307 -ETFVGVVRIHDLLKL 321


>gi|237750770|ref|ZP_04581250.1| arabinose-5-phosphate isomerase [Helicobacter bilis ATCC 43879]
 gi|229373860|gb|EEO24251.1| arabinose-5-phosphate isomerase [Helicobacter bilis ATCC 43879]
          Length = 323

 Score =  191 bits (485), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/281 (39%), Positives = 176/281 (62%), Gaps = 5/281 (1%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           +KG++V+ G+GKSG +  K+++TL+STGTPS F+H  EA HGDLG++ +DD ++ +S+SG
Sbjct: 41  MKGKLVLIGVGKSGLVAQKISATLSSTGTPSIFLHPTEAMHGDLGVLQKDDCVLAISYSG 100

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            S+E+ AIL + RR  +P+I ++   KS ++   D  L L  E E+CP   APTTS  + 
Sbjct: 101 ESEEIVAILPHIRRMGLPIITMSKSKKSRMSMLGDYFLPLIIEREACPLQTAPTTSTTLT 160

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GD+LA+ L+ +R FS++DF   HPGG LG  LF+  SD+M +  ++PL+     L D
Sbjct: 161 LALGDSLAVCLMRARGFSKSDFASFHPGGSLGRMLFIKVSDIMQT-QNLPLLDTAMSLRD 219

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLN-TLSVEDVMIKNPKVILED 299
           AI++++  R G    VD   KL G++++GD+ R  F KD +   S      KNPK + + 
Sbjct: 220 AISVMTNGRLGNAFFVDSNHKLLGVLSDGDLRRAMFDKDFSLESSAFSYATKNPKALYDS 279

Query: 300 TLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +L   A++++    I +L ++       G++H  DL++ G
Sbjct: 280 GMLAFDALKIIEDSKIQILPILTQEGVLEGVIHMHDLIQAG 320


>gi|187735030|ref|YP_001877142.1| KpsF/GutQ family protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187425082|gb|ACD04361.1| KpsF/GutQ family protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 323

 Score =  190 bits (483), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 176/316 (55%), Gaps = 13/316 (4%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR---VVITGIGKSGHIGSKLASTLAS 88
           I E RG+ S        L   F+ AV+ +     R   +VI G+GKSG+IG+K+ +TL S
Sbjct: 15  IEELRGVLS-------RLDDNFNKAVDLMSQALDRGNKIVIVGVGKSGNIGAKIVATLNS 67

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+  + +  A HGDLG++   D+ I +S+SG + EL  +L + +RF +P+I++T   
Sbjct: 68  TGTPTVLLDSLNALHGDLGIVQDGDVCIAMSFSGETSELLTLLPFIKRFELPIISMTGNT 127

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A ++DIVL      E+CP  LAPT+S    L +GDALA+AL+E+R+F+  DF   H
Sbjct: 128 GSSLAKYSDIVLDTGVSREACPLNLAPTSSTTAMLVMGDALAMALVEARHFTARDFAKRH 187

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L    SD+M  G+ + ++     + D +  ++    G   ++ E +KL GI 
Sbjct: 188 PGGSLGRALLTRVSDIMRRGEEMAMLPETASVNDCLKAMTTAHAGACVLLTEDRKLAGIF 247

Query: 268 TEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T GD  R +  +  +    V   M +NP  ++ED L   A + +   +I  L+V++    
Sbjct: 248 THGDFVRAYGANPLIGEQPVSGFMTRNPIYVMEDDLAAEAAKAVSNRHIDDLVVLNAEMA 307

Query: 326 AIGIVHFLDLLRFGII 341
            +GI+   DL R  ++
Sbjct: 308 PVGIIDLQDLARLKLV 323


>gi|256830976|ref|YP_003159704.1| KpsF/GutQ family protein [Desulfomicrobium baculatum DSM 4028]
 gi|256580152|gb|ACU91288.1| KpsF/GutQ family protein [Desulfomicrobium baculatum DSM 4028]
          Length = 331

 Score =  189 bits (481), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/308 (38%), Positives = 174/308 (56%), Gaps = 6/308 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E +GL+++       L   F  A+E +    GRVVITG+GKSG +G K+A+TL+STGTPS
Sbjct: 21  EAQGLAAVRD----RLGDSFVRALEVMAGCSGRVVITGLGKSGLVGRKIAATLSSTGTPS 76

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  E +HGDLGMI  +D+I+ +S SG +DEL  IL   +  +  +I++T    S +A
Sbjct: 77  FFLHPVEGAHGDLGMIRHEDVIVAISNSGETDELNNILPSLKSLAGHVISLTGGIHSTMA 136

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+V+      E+CPHGLAPT S    LA+GDALA+ L++ ++F+ +DF   HPGG L
Sbjct: 137 RLSDVVIDTSVPCEACPHGLAPTASTTATLAVGDALAVCLIDWKSFALDDFRRFHPGGAL 196

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G       + +     +P+V  G  L  A+ +L+    GCV VVD G  L G++T+GD+ 
Sbjct: 197 GQRLTKRVEELMRFSPLPVVPSGASLGQALDVLNAGGLGCVCVVDGGGHLLGLLTDGDVR 256

Query: 274 RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R        L   V+ VM  +P            + ++    I+VL VV   Q   G+VH
Sbjct: 257 RLVCAGRLALDAVVDSVMTASPLHATPGQKAAEVLDIMESRAITVLPVVAPDQTLAGMVH 316

Query: 332 FLDLLRFG 339
             D+L  G
Sbjct: 317 MHDVLGQG 324


>gi|297170237|gb|ADI21275.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured myxobacterium HF0010_08B07]
          Length = 321

 Score =  189 bits (481), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/281 (39%), Positives = 170/281 (60%), Gaps = 5/281 (1%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG++ ITG+GKSGHI +K A+TL+STGTPSFF+H AEA HGDLGMI ++D II +S SG 
Sbjct: 43  KGKIFITGVGKSGHIANKFAATLSSTGTPSFFIHPAEALHGDLGMIEKNDAIIAISKSGE 102

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S E+  ++       I   +IT    S +A  +   + +  + E+CP+ LAPT+S  + L
Sbjct: 103 SKEICDLIPAINMKKINFFSITENVNSTIAKASKSHILVKVKREACPNDLAPTSSTTVTL 162

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           A+GDA+A+ALL+S+ F+  DF   HPGGKLG  L +   D+M       +VK    L D 
Sbjct: 163 ALGDAIAVALLKSKGFTSEDFAKSHPGGKLGKKLTLRTRDLMVPIKKAAVVKDSDSLKDL 222

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDT 300
           I  +SEK+ G +A+V +G  + G+ ++GD+ R   K+  ++ + +  V+ K  K I  + 
Sbjct: 223 IFEVSEKKQG-IALVKKGGHIIGVFSDGDLRRQLQKNIQIDKIKLSSVLTKKFKTINSEE 281

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L+  A + ++   +  L VV + +K +GI+   D+L   +I
Sbjct: 282 LVVKAAEKMKSFKVYTL-VVKENEKVVGILTMHDILEANVI 321


>gi|320105904|ref|YP_004181494.1| KpsF/GutQ family protein [Terriglobus saanensis SP1PR4]
 gi|319924425|gb|ADV81500.1| KpsF/GutQ family protein [Terriglobus saanensis SP1PR4]
          Length = 325

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/324 (34%), Positives = 177/324 (54%), Gaps = 9/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M+NS +  A   +  E   L  L   + G +      A+ +I A     GRV+  G+GKS
Sbjct: 1   MENSPLTPA-ECVRVEADALMRLADRMSGPMKASIDDAIHRIVACADTGGRVIAVGLGKS 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K  +TL S GTP+ F+HAAEA+HGD+GM+ + DL+I  S+SG ++EL  +L   +
Sbjct: 60  GHIAQKFVATLNSLGTPAQFLHAAEAAHGDIGMVGKRDLLIAFSYSGETEELLRLLDTLK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             +  LIA+     S +AC AD+VL +  + E+C   LAPT S    LA+ DALAI   +
Sbjct: 120 LRAAALIALCGSTGSTLACAADLVLDVSVDIEACGMNLAPTASTTSMLALSDALAIEAGQ 179

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            RNF   DF +LHPGG+LG       ++MH+ + +P V    PL+  I  +SEKR G   
Sbjct: 180 RRNFRPEDFALLHPGGRLGHRLQRVRELMHANERLPQVPPETPLLKVIHEMSEKRLGMTT 239

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVE----DVMIKNPKVILEDTLLTVAMQLLRQ 311
           V+    +L G+I++GD+ R   ++    ++E    +V+  +   I E+     A+ ++  
Sbjct: 240 VLSPKGQLLGVISDGDLRRLLERE-GGFALERTAGEVLHADATWIDENEFAATALAIMEA 298

Query: 312 HNISVLMVVDDCQKAIGIVHFLDL 335
             I+ ++  +  +   G++H  DL
Sbjct: 299 KKITAIVACNANRTVTGVLHLHDL 322


>gi|171913037|ref|ZP_02928507.1| arabinose-5-phosphate isomerase [Verrucomicrobium spinosum DSM
           4136]
          Length = 329

 Score =  189 bits (480), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 159/279 (56%), Gaps = 3/279 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++V+ G+GKSG+IG KL +TL STG  S  ++A +A HGDLG++   D +++LS+SG + 
Sbjct: 51  KIVVCGVGKSGNIGRKLVATLNSTGATSVNLNAQDALHGDLGVLDDGDAVVLLSYSGETQ 110

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L + RR  + LIAIT    S +A +AD+VL +  + E+CP  LAPT+S    L +
Sbjct: 111 ELVDLLPHLRRHRVTLIAITGGLSSTLARNADVVLDVHVQREACPLNLAPTSSTTAMLVL 170

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
            DALA+ LLE+R F E+DF   HP G LG  L     DVM +G S+ L      + +A+ 
Sbjct: 171 CDALAMVLLEARGFREDDFAKYHPSGSLGRALLTKVGDVMRTGTSLALATEESTIQEALQ 230

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLL 302
            ++  R G   +V+    L G+ T GD  R F  D N     V   M +NP  I E  L 
Sbjct: 231 AMTRARCGAAVIVNPAGMLAGVFTHGDFVRAFQADPNIAGRPVAHFMTRNPVSIAESKLA 290

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              + +L  H +  L+V+++  + +G+V   DL R  ++
Sbjct: 291 AEVLAVLEHHRVDDLVVLNETGQPVGLVDTQDLTRMKLV 329


>gi|257452361|ref|ZP_05617660.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|257465847|ref|ZP_05630158.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917004|ref|ZP_07913244.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317058904|ref|ZP_07923389.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|313684580|gb|EFS21415.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|313690879|gb|EFS27714.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 322

 Score =  189 bits (480), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 121/330 (36%), Positives = 189/330 (57%), Gaps = 18/330 (5%)

Query: 18  LMKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIG 73
           +++N  +      II  E +GL  L++S+  EL       +E  K I   KG+++ITGIG
Sbjct: 1   MLENQEILAIAHGIIDTEIQGLEKLKASMGQEL-------IEAAKIIYESKGKLIITGIG 53

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K+G IG K+A+TL+STGT + F+++ E  HGDLGM+  +D++I +S SG SDE+  I+  
Sbjct: 54  KTGAIGKKIAATLSSTGTTTIFMNSTEGLHGDLGMVNPEDIVIGISNSGESDEILHIIPA 113

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     + A+T    S +A  A+IVL    + E CP  LAP  S    LA+GDALA  L
Sbjct: 114 IKNIGARVFAMTGNPNSRLAQEAEIVLFCGVDSEGCPLNLAPMASTTSALALGDALAGIL 173

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           ++ R+F   +F + HPGG LG  L     ++M +G+ + L  +   + D I  ++EKR G
Sbjct: 174 MKMRDFQPQNFAMYHPGGSLGRRLLSRVKNLMKTGEDLALCSLDTKMKDVIVKMNEKRLG 233

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            + V+ +G++L GIITEGDI R   ++    T   E++M K  K + +D L   A+  + 
Sbjct: 234 ILCVM-KGEELVGIITEGDIRRALSREEEFFTFHAEEIMTKQYKKVEQDMLANEALSYME 292

Query: 311 Q--HNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  + ISV+ V  +  K +G+V   DLL+ 
Sbjct: 293 EGKYQISVMPVFHEG-KFVGVVRIHDLLKI 321


>gi|71892233|ref|YP_277966.1| D-arabinose 5-phosphate isomerase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796339|gb|AAZ41090.1| putative phosphosugar binding protein [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 325

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/279 (40%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V ++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG +
Sbjct: 47  GKVAVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLGMIGTQDVVMFISYSGRA 106

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+  ++       IP+IA T +  S +A  A  VL +  + E+CP  L+PT+S +  L 
Sbjct: 107 CEIITLMPLLADSGIPVIAFTGDISSPLAKGATCVLNIKIQREACPMELSPTSSTVNTLM 166

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDAL +AL+  R FS   F   HPGG+LG  L  C   +M +G++I  V     ++DA+
Sbjct: 167 MGDALTMALMRHRGFSLEQFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAM 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTL 301
             LS    G  AV D   ++ G+ T+GD+ R     K LN   V+  M K    +L++  
Sbjct: 227 FELSRTGLGLTAVCDNHNRVAGVFTDGDLRRWIVQGKSLND-PVDIAMTKPGYCMLKEWR 285

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +VA++ L Q  I+   VVD     +G ++  DL + GI
Sbjct: 286 ASVALKALHQRKITAAPVVDKLGILVGSINMHDLHQAGI 324


>gi|294055879|ref|YP_003549537.1| KpsF/GutQ family protein [Coraliomargarita akajimensis DSM 45221]
 gi|293615212|gb|ADE55367.1| KpsF/GutQ family protein [Coraliomargarita akajimensis DSM 45221]
          Length = 328

 Score =  189 bits (479), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/298 (38%), Positives = 171/298 (57%), Gaps = 6/298 (2%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A++ I     ++VI GIGKSGHIG KLA+T +S G P+ F+HAAEA HGDLG+
Sbjct: 30  LDASFEQAIDIILNAPRKIVICGIGKSGHIGVKLAATFSSCGVPAVFLHAAEAIHGDLGV 89

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
               D  IVLS SGS+ E+  ++   +RF  P+IAI    +S +A  AD+VL    E E+
Sbjct: 90  YRPGDPTIVLSKSGSTAEVLRLMPMFKRFDSPVIAIVGNVESPIAKGADVVLDGSVESEA 149

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
            P  L PT+S+ + LAIGDALA A +++R+F+  +F   HPGG+LG  L +   DVMH+ 
Sbjct: 150 DPLNLMPTSSSTVSLAIGDALAAASVQARDFTPEEFATYHPGGQLGRNLLLTVGDVMHAA 209

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSV 285
           + +        L + +  +++   G   +VD   K+ G++T+GD+ R   K  D+  L V
Sbjct: 210 EGVATATGDETLREVVMRMTQYPLGAACIVDASGKMTGLLTDGDVRRVLSKEGDILNLQV 269

Query: 286 EDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVD-DCQKAIGIVHFLDLLRFGI 340
              M  +P     D  L  A++++  R   ISVL VVD D  + +G++   D  + G+
Sbjct: 270 AACMTSSPVYTKPDVPLGDALKIMEDRSSQISVLPVVDEDTMQLLGLLRLHDAYQPGL 327


>gi|325289716|ref|YP_004265897.1| KpsF/GutQ family protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324965117|gb|ADY55896.1| KpsF/GutQ family protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 320

 Score =  189 bits (479), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/322 (36%), Positives = 178/322 (55%), Gaps = 8/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A R   AE   L  +  +L       F   ++ I   +G+++I G+GKSGH+G K
Sbjct: 2   SKIEIAKRVFDAEISALQKIADNLDE----TFDRILDLILNCQGKIIIIGMGKSGHVGGK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T++S G P+ FVH  EA HGDLGMI + D++I +S+SG SDE+  IL   R    P+
Sbjct: 58  IAATMSSLGVPTIFVHPGEAMHGDLGMIQKQDVVIAISYSGESDEIIKILPNIRIIGAPI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT+   S +A ++ IV       E+C  GLAPT S  + +  GDALAIA  E+ NF +
Sbjct: 118 IGITNNGNSTLAHNSAIVQVFENLKEACQLGLAPTASTTVAMVYGDALAIAASETINFGK 177

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG  L +  SD+M        V  G  L  AI   S      VAVVD+ 
Sbjct: 178 QDFALYHPAGSLGKKLTIRVSDLMKHLMESDTVNEGSLLKQAIIAFSRTGADVVAVVDKT 237

Query: 261 QKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +KL GIIT G+I R  N   D+   ++ D++ + P  I  + +   A++++ + NI  + 
Sbjct: 238 KKLIGIITNGEIERAINMGSDIYKTTIFDMVNRFPVYINSEEMAVDALKIMMEKNIHSIP 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VV + ++ +GI+    +L  GI
Sbjct: 298 VVKE-ERIVGIISKQSILDIGI 318


>gi|297520154|ref|ZP_06938540.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 251

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 104/231 (45%), Positives = 145/231 (62%), Gaps = 1/231 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 140

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 141 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 200

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+
Sbjct: 201 HLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDL 251


>gi|223934763|ref|ZP_03626683.1| KpsF/GutQ family protein [bacterium Ellin514]
 gi|223896718|gb|EEF63159.1| KpsF/GutQ family protein [bacterium Ellin514]
          Length = 335

 Score =  188 bits (477), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/296 (38%), Positives = 172/296 (58%), Gaps = 5/296 (1%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           G L   F  A + I +  G+VV++G+GKSG IG KL +TL STGTP+ F+H AEA HGDL
Sbjct: 35  GRLGHGFLKAADLILSHPGKVVVSGLGKSGIIGKKLVATLCSTGTPAVFLHPAEALHGDL 94

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+ +  D  I++S SG++ EL  ++   R+F  PLI I     S +A   D VL      
Sbjct: 95  GVYSLGDPTILISKSGTTAELLRLVPMLRQFESPLIGIFGNTSSHLARRMDAVLDASVRC 154

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+    LAPT+S I+ +A+GDALA AL+++RNF   DF   H GG+LG  L +   DV+H
Sbjct: 155 EADACNLAPTSSTIVAMALGDALASALMQARNFGPEDFARFHAGGQLGRNLLMKVRDVLH 214

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
             D++  V +   + D +  +++  FG   V+     L+G+IT+GD+ R    H D+ +L
Sbjct: 215 PLDAVACVGVDATVKDVVIGMTQYPFGAACVIRFDGVLEGLITDGDLRRALQEHDDIRSL 274

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V ++M  +P  I  +  L  A+QL+  R+  ISVL VVD     +G++   D+ +
Sbjct: 275 PVTEIMTASPVAIRPEARLKEALQLMEERELQISVLPVVDAQGLCLGLIRIHDIYQ 330


>gi|167837701|ref|ZP_02464584.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis MSMB43]
          Length = 311

 Score =  187 bits (476), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/291 (38%), Positives = 162/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+ L +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+TLASTGTPS
Sbjct: 17  ESRALAGLSA----RVDESFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATLASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GDI 
Sbjct: 193 GRRLLSKVDDEMAADDLPFVDERAPAIDVLQAMTRGRLGLAIVRREVG--FGIVTDGDIR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M K+P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAVEAHGDTLFRRTASDLMSKDPAMVPLGTRVEDALLMMETRRINALLVFD 301


>gi|149188193|ref|ZP_01866487.1| D-arabinose 5-phosphate isomerase [Vibrio shilonii AK1]
 gi|148837782|gb|EDL54725.1| D-arabinose 5-phosphate isomerase [Vibrio shilonii AK1]
          Length = 323

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/298 (37%), Positives = 171/298 (57%), Gaps = 3/298 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L G L   F  AV  I   + +++++GIGKSGHIG K+A+TLASTG+P+FFVH AEA HG
Sbjct: 26  LLGRLEDNFAQAVSHIVNCQSKIIVSGIGKSGHIGKKMAATLASTGSPAFFVHPAEALHG 85

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGMIT+ DL+I++S SG S E K +L   +   I +I +T    S +A ++D V+ +  
Sbjct: 86  DLGMITKGDLVILISNSGESAEFKTMLPILKERGISIIGMTGNTSSHLAQNSDCVVNIAI 145

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
           + E+CP GLAPT+SA+  L +GDALAI  ++ R F   DF   HP G LG  L     ++
Sbjct: 146 DSEACPLGLAPTSSAVNTLIMGDALAITAMKIRKFDSIDFAQSHPAGALGAKLLTTVGNI 205

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT 282
           +   +   + +    L +AI++L E   G +A+  +   L G+ T+GD+ R   +  +  
Sbjct: 206 ISEFEHNAICQPEQSLAEAISVLCESGKGLIAICRQ-TTLVGVFTDGDLRRALANGAVLE 264

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +E  M  N K          A+ L+  + IS L VV++  + +G++   D+ R GI
Sbjct: 265 DKIEQHMTTNGKQTSARVKAYDALNLMLDNAISALPVVNERDECVGVISISDIHRRGI 322


>gi|302344542|ref|YP_003809071.1| KpsF/GutQ family protein [Desulfarculus baarsii DSM 2075]
 gi|301641155|gb|ADK86477.1| KpsF/GutQ family protein [Desulfarculus baarsii DSM 2075]
          Length = 338

 Score =  187 bits (475), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/317 (38%), Positives = 170/317 (53%), Gaps = 13/317 (4%)

Query: 35  KRGLSSLESSLQG------ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +RG   L   +QG       L   F  AVE I A KG++V TGIGKSG I  K+ +TL S
Sbjct: 11  ERGRQVLAVEIQGLQRVGQRLDDGFAQAVELILASKGKIVATGIGKSGIIARKIVATLNS 70

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG  + F+H  EA HGDLG +   D+++ LS SG +DEL  +    R     ++A+T   
Sbjct: 71  TGANAIFLHPVEALHGDLGTVCPGDVVLALSNSGQTDELVNLTPQLRGHGAKIVALTGGM 130

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  AD V+    E E+CP  LAPT S    +A+GDALA+ L+E R F   DF   H
Sbjct: 131 GSALARAADAVIDTGVEREACPFNLAPTASTTACMAVGDALAVVLMEIRAFKPEDFRRHH 190

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLK 264
           PGG LG  L +  S+VM   D  PL     P+  A+ ++     G V +   G+   +L 
Sbjct: 191 PGGNLGQRLALAVSEVMIPADKTPLAAPDDPVQKAVAVMDAGDLGSVLITSGGRPGTELL 250

Query: 265 GIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+ T+GD+ R     +DL+   +E  M + P VI   T+   A+ L+ +  I+VL VVD 
Sbjct: 251 GLFTDGDLRRAMVAGRDLSVGPIERFMTRRPLVIGPTTMAADALHLMEERLITVLPVVDQ 310

Query: 323 CQKAIGIVHFLDLLRFG 339
             + +GIVH  D+L  G
Sbjct: 311 G-RLLGIVHLHDVLGRG 326


>gi|213029624|ref|ZP_03344071.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 218

 Score =  187 bits (474), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 97/199 (48%), Positives = 132/199 (66%), Gaps = 5/199 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF + HPGG L
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGAL 198

Query: 214 G-TLFVCASDVMHSGDSIP 231
           G  L +  SD+MH+GD IP
Sbjct: 199 GRKLLLRVSDIMHTGDEIP 217


>gi|76809505|ref|YP_334633.1| arabinose-5-phosphate isomerase [Burkholderia pseudomallei 1710b]
 gi|76578958|gb|ABA48433.1| arabinose-5-phosphate isomerase [Burkholderia pseudomallei 1710b]
          Length = 351

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 9/315 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL +     +S  F  AV+ I    GRVV+
Sbjct: 33  SMAHDGSQMNHHNYLDSARQVFDIESRALASLSA----RVSDSFGDAVDAILRSSGRVVV 88

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 89  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 148

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 149 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 208

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 209 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 268

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 269 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 326

Query: 307 QLLRQHNISVLMVVD 321
            ++    I+ L+V D
Sbjct: 327 LMMEARRINALLVFD 341


>gi|254258478|ref|ZP_04949532.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
 gi|254217167|gb|EET06551.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
          Length = 311

 Score =  186 bits (472), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 162/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +S  F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVSDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVRRETG--FGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|78060502|ref|YP_367077.1| KpsF/GutQ [Burkholderia sp. 383]
 gi|77965052|gb|ABB06433.1| KpsF/GutQ [Burkholderia sp. 383]
          Length = 310

 Score =  186 bits (471), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 165/310 (53%), Gaps = 11/310 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ + ++ A +    E R L+ + + L       F  AVE I   +GRVV+ G+GKSG +
Sbjct: 1   MRQNHIESARQVFEIESRALAGVAARLDA----NFDAAVETILGSRGRVVVCGMGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STGTP FF+H  EA HGDLGM+T DD  + +S SG +DE+  ++ + R   
Sbjct: 57  GRKIAATLSSTGTPGFFMHPGEAYHGDLGMVTPDDTFLAISNSGETDEVIKLIPFLRNNG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T    S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R 
Sbjct: 117 NDLIALTGNPSSTLASAARVHLDIGVEREACPLQLAPTASTTATLAMGDALAVTLMRARG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV-V 257
           F    F   HPGG LG   +   D   +   +P V      +D +  ++  R G   V  
Sbjct: 177 FQPEHFARFHPGGSLGRRLLSTVDDEMACRDLPFVTEDTSTLDVLDAMTRGRLGLAIVKR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           D G    GI+T+GD+ R   +  + +   +  D+M   P  +   T +  A+ L++Q  I
Sbjct: 237 DAGW---GIVTDGDVRRAIERHGDGVLRRTAADMMSIEPSTVPPGTRVEDALLLMQQQRI 293

Query: 315 SVLMVVDDCQ 324
             L+V D  +
Sbjct: 294 GALLVSDGTR 303


>gi|53720379|ref|YP_109365.1| putative capsule expression protein [Burkholderia pseudomallei
           K96243]
 gi|52210793|emb|CAH36779.1| putative capsule expression protein [Burkholderia pseudomallei
           K96243]
          Length = 331

 Score =  185 bits (469), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 170/315 (53%), Gaps = 9/315 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL +     +   F  AV+ I    GRVV+
Sbjct: 13  SMAHDGSQMNHHNYLDSARQVFDIESRALASLSA----RVGDSFGDAVDAILRSSGRVVV 68

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 69  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 128

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 129 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 188

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 189 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 248

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 249 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 306

Query: 307 QLLRQHNISVLMVVD 321
            ++    I+ L+V D
Sbjct: 307 LMMEARRINALLVFD 321


>gi|167895672|ref|ZP_02483074.1| putative capsule expression protein [Burkholderia pseudomallei
           7894]
          Length = 311

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNTRSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVRRETG--FGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|24212746|ref|NP_710227.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24193385|gb|AAN47245.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 322

 Score =  184 bits (468), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 175/290 (60%), Gaps = 5/290 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E I   KG++++TG+GKSG +G K++STL+STGTPS F+H A+A+HGD G+I+ +D+I
Sbjct: 33  AIELILECKGKLIVTGVGKSGDVGKKISSTLSSTGTPSVFLHPADAAHGDAGIISCEDII 92

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +  SG S+EL  ++   +     L+++T+   S +A  +D+VL  P   E+CP  LAP
Sbjct: 93  IAIGKSGESEELLNLIPTIKNIGAKLVSMTANVDSKLAKESDVVLITPVLKEACPLELAP 152

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T+S  + L +GDA+A+ L+E +NF   +F + HP G+LG  L +   DVM     +  V 
Sbjct: 153 TSSTTIALILGDAIAMCLMELKNFKRENFALYHPAGRLGKRLSLKIDDVMRKDKDLAKVL 212

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKN 292
               L + +T ++ KR G   V+D    L GIIT+ DI +     K  +++S E +M  +
Sbjct: 213 PDTKLENILTEITVKRQGATGVIDLNGTLLGIITDFDIRKKLKEGKLDSSISAEQLMNPS 272

Query: 293 PKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P + L  +     ++ +  R + ISV  +VD+ ++ IGIV   DLL+ G+
Sbjct: 273 PTMFLSGSNAYDVLKQMESRPNPISVAPIVDNSKRLIGIVSIHDLLQKGL 322


>gi|217421125|ref|ZP_03452630.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|217396537|gb|EEC36554.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
          Length = 351

 Score =  184 bits (467), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/315 (35%), Positives = 170/315 (53%), Gaps = 9/315 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL +     +   F  AV+ I    GRVV+
Sbjct: 33  SMAYDGSQMNHHNYLDSARQVFDIESRALASLSA----RVGDSFGDAVDAILRSSGRVVV 88

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 89  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 148

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 149 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 208

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 209 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 268

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 269 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 326

Query: 307 QLLRQHNISVLMVVD 321
            ++    I+ L+V D
Sbjct: 327 LMMEARRINALLVFD 341


>gi|167920279|ref|ZP_02507370.1| putative capsule expression protein [Burkholderia pseudomallei
           BCC215]
          Length = 311

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLRAMTRGRLGLAIVRRETG--FGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|126438820|ref|YP_001060222.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 668]
 gi|126452561|ref|YP_001067486.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 1106a]
 gi|167720997|ref|ZP_02404233.1| putative capsule expression protein [Burkholderia pseudomallei
           DM98]
 gi|167739970|ref|ZP_02412744.1| putative capsule expression protein [Burkholderia pseudomallei 14]
 gi|167817191|ref|ZP_02448871.1| putative capsule expression protein [Burkholderia pseudomallei 91]
 gi|167825603|ref|ZP_02457074.1| putative capsule expression protein [Burkholderia pseudomallei 9]
 gi|167847088|ref|ZP_02472596.1| putative capsule expression protein [Burkholderia pseudomallei
           B7210]
 gi|167904065|ref|ZP_02491270.1| putative capsule expression protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167912322|ref|ZP_02499413.1| putative capsule expression protein [Burkholderia pseudomallei 112]
 gi|226194235|ref|ZP_03789834.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237813613|ref|YP_002898064.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           MSHR346]
 gi|242317929|ref|ZP_04816945.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
 gi|254194882|ref|ZP_04901312.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|126218313|gb|ABN81819.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 668]
 gi|126226203|gb|ABN89743.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106a]
 gi|169651631|gb|EDS84324.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|225933700|gb|EEH29688.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504710|gb|ACQ97028.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           MSHR346]
 gi|242141168|gb|EES27570.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
          Length = 311

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 161/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVRRETG--FGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|134280148|ref|ZP_01766859.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 305]
 gi|254299089|ref|ZP_04966539.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|134248155|gb|EBA48238.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 305]
 gi|157809046|gb|EDO86216.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
          Length = 311

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/291 (37%), Positives = 160/291 (54%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+ +R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMRARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V  E     GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVRRETG--FGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|183222753|ref|YP_001840749.1| carbohydrate isomerase KpsF/GutQ family protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189912785|ref|YP_001964340.1| sugar phosphate isomerase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777461|gb|ABZ95762.1| Sugar phosphate isomerase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781175|gb|ABZ99473.1| Carbohydrate isomerase, KpsF/GutQ family [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 324

 Score =  184 bits (467), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/285 (38%), Positives = 170/285 (59%), Gaps = 11/285 (3%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG+V++TG+GKSG I  K++ TL+STGT ++F+H  +ASHGD G++  DD+++ +  SG 
Sbjct: 43  KGKVIVTGVGKSGDIAKKISHTLSSTGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGE 102

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S+EL  IL   R+    ++ IT+ +KS +A  +D+V+  P   E+CP  LAPT+S  + L
Sbjct: 103 SEELNYILPTLRKIGAKIVGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTIAL 162

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDA+A+AL+E + F  +DF + HP G+LG  L +  SDVM  G+    + +   L   
Sbjct: 163 VLGDAIAVALMELKEFKADDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVI 222

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILE-- 298
           +  ++EK  G   VVDE  KL G+IT+ DI +   K   + SV  +++M  NP   L   
Sbjct: 223 LKEITEKGIGATGVVDENFKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNE 282

Query: 299 ---DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D L+ +     R+  ISV  VVD+    +G++   DLL+ G+
Sbjct: 283 KAYDVLINMEG---RERPISVAPVVDENGIFVGMISLHDLLQKGL 324


>gi|254669575|emb|CBA03568.1| KpsF protein [Neisseria meningitidis alpha153]
          Length = 315

 Score =  184 bits (466), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/320 (36%), Positives = 175/320 (54%), Gaps = 11/320 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + ++ A+ ++  E   +  +   L  E    F  A+E I   +GRVV+ G+GKSG I
Sbjct: 1   MKTNFLKLAVETLQLEANAIMEMSKRLDNE----FEKAIEIILNTQGRVVVVGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T+ASTGT +FFVH  EA HGDLGMI   D+ +++S SG ++E+  IL + +   
Sbjct: 57  GQKLAATMASTGTSAFFVHPGEAFHGDLGMIKPIDVALLISNSGETEEIIRILPFLKEQG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T   KS +A HA  +L +    E+C + LAPT+S    LA+GDALA+ L   + 
Sbjct: 117 NKIIAMTGNIKSTLAKHAHSLLDISVSREACSNNLAPTSSTTCTLAMGDALAMVLQSEKK 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG  L    SDVM +   IP         + +  ++    G   V+
Sbjct: 177 FLPEDFARFHPGGSLGRRLLTRVSDVMKT--KIPHCLPDASFKEIVYSINRGYMGLTLVM 234

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E   L GIIT+GD+ R F +  ++N +  +D+M  +PK +  DT    A   +    I 
Sbjct: 235 -EHDTLHGIITDGDLRRAFDRFDNINQIKAKDIMSLSPKYVSADTRFAEAEAYMHAEKID 293

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L VV +  K IG+++  D+
Sbjct: 294 SL-VVKESNKVIGVLNIYDI 312


>gi|45655954|ref|YP_000040.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599187|gb|AAS68677.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 322

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 174/290 (60%), Gaps = 5/290 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E I   KG++++TG+GKSG +G K++STL+STGTPS F+H A+A+HGD G+I+ +D+I
Sbjct: 33  AIELILECKGKLIVTGVGKSGDVGKKISSTLSSTGTPSVFLHPADAAHGDAGIISCEDII 92

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +  SG S+EL  ++   +     L+++T+   S +A  +D+VL  P   E+CP  LAP
Sbjct: 93  IAIGKSGESEELLNLIPTIKNIGAKLVSMTANVDSKLAKESDVVLITPVLKEACPLELAP 152

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVK 234
           T+S  + L +GDA+A+ L+E +NF   +F + HP G+LG  L +   DVM     +  V 
Sbjct: 153 TSSTTIALILGDAIAMCLMELKNFKRENFALYHPAGRLGKRLSLKIDDVMRKDKDLAKVL 212

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKN 292
               L + +T ++ KR G   V D    L GIIT+ DI +     K  +++S E +M  +
Sbjct: 213 PDTKLENILTEITVKRQGATGVTDLNGTLLGIITDFDIRKKLKEGKLDSSISAEQLMNPS 272

Query: 293 PKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P + L  +     ++ +  R + ISV  +VD+ ++ IGIV   DLL+ G+
Sbjct: 273 PTMFLSGSNAYDVLKQMESRPNPISVAPIVDNSKRLIGIVSIHDLLQKGL 322


>gi|23009269|ref|ZP_00050381.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Magnetospirillum magnetotacticum MS-1]
          Length = 183

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/168 (51%), Positives = 117/168 (69%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  ALR+I  E+ GL+ L +++   L   F  AV +I A +GRV+ TG+GKSGH+ 
Sbjct: 16  RAPAIASALRTIETEREGLACLMAAIGNGLGEPFAQAVARIGAARGRVICTGMGKSGHVA 75

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ +
Sbjct: 76  RKIAATMASTGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRV 135

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            L+AITS   S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GD
Sbjct: 136 GLVAITSNAASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGD 183


>gi|33519910|ref|NP_878742.1| D-arabinose 5-phosphate isomerase [Candidatus Blochmannia
           floridanus]
 gi|33504255|emb|CAD83518.1| sugar phosphate isomerase involved in capsule formation [Candidatus
           Blochmannia floridanus]
          Length = 326

 Score =  183 bits (465), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/276 (39%), Positives = 166/276 (60%), Gaps = 2/276 (0%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG+V+++G+GKSGHIG K+A++LASTGT +FFVH AEA HGDLGMI   D++I +S+SG 
Sbjct: 44  KGKVIVSGMGKSGHIGKKIAASLASTGTSAFFVHPAEALHGDLGMIGEQDVVIFISYSGY 103

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + E+  ++       IP+IA+T + +S +A  A+ VL + ++ E+CP  L PT+S++  L
Sbjct: 104 AYEIMTLMPLLSDSGIPVIALTGDLQSPLAVGAECVLNIKRKREACPMELVPTSSSVNAL 163

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDAL I+L+  + FS   F   HPGG+LG+ L  C   +M  G+ I  V     ++DA
Sbjct: 164 MMGDALTISLMRYKGFSTEQFARSHPGGRLGSKLLNCVHHIMRVGEHISKVFCTGTVMDA 223

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTL 301
           +  LS    G  AV D    + G+ T+GD+ R   +  + T SV   M     VI  D  
Sbjct: 224 MFELSRTGLGLTAVCDINDHVIGVFTDGDLRRWIVQGKSLTDSVNLAMTCPGCVIDRDWK 283

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + VA+++L + NI+   VV+     +G ++  DL R
Sbjct: 284 VDVALKMLHKLNITAAPVVNKLGIIVGSINVHDLHR 319


>gi|254180819|ref|ZP_04887417.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|184211358|gb|EDU08401.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
          Length = 311

 Score =  183 bits (464), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/291 (37%), Positives = 161/291 (55%), Gaps = 9/291 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+SL +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+T ASTGTPS
Sbjct: 17  ESRALASLSA----RVGDSFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATFASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   + D +P V    P ID +  ++  R G   V    +   GI+T+GD+ 
Sbjct: 193 GRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIV--RCETGFGIVTDGDVR 250

Query: 274 RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           R      +TL   +  D+M  +P ++   T +  A+ ++    I+ L+V D
Sbjct: 251 RAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRINALLVFD 301


>gi|87198751|ref|YP_496008.1| KpsF/GutQ family protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134432|gb|ABD25174.1| KpsF/GutQ family protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 340

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 168/286 (58%), Gaps = 4/286 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV  + +  GRV ++G+GKSGH+  K+ASTL+STG P+ F+H  EA HGDLGM+  
Sbjct: 49  SFDAAVSLLHSGGGRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCP 108

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++IVLS SG+S EL+ ++ +A+R S  ++AI +   S +   ADI L +P  PE+CP 
Sbjct: 109 GDVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPV 168

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            +APTTS  M LA+GDALA+A++ +R        +LHPGG +G     A DVM + D++P
Sbjct: 169 NIAPTTSTTMMLALGDALAVAVMSARGIGVERIRLLHPGGPIGERLRVAEDVMRT-DALP 227

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           LV +  P+ + +  ++    G   VV  G  L G+I E D      +DL       +M +
Sbjct: 228 LVGVEDPMPEVLLCMARSGLGIAGVVALGGGLVGVI-EADRLPAVARDLAGERAGFLMNR 286

Query: 292 NPKVILEDTLL-TVAMQL-LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  V   +T L  +A  L +   + ++++  ++ ++ IG+V   +L
Sbjct: 287 HAWVARRETPLDEIARNLGVGGSDAALVIAGENDRRPIGVVSARNL 332


>gi|319760582|ref|YP_004124520.1| arabinose 5-phosphate isomerase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039296|gb|ADV33846.1| arabinose 5-phosphate isomerase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 325

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 106/281 (37%), Positives = 165/281 (58%), Gaps = 3/281 (1%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G+V+++GIGKSGHIG KLA++L+STGTP+FF+H +EA HGDLGMI   D++I +S+SG 
Sbjct: 44  EGKVIVSGIGKSGHIGKKLAASLSSTGTPAFFMHPSEALHGDLGMIESKDVVIFISYSGR 103

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S E+  ++      +IP+IA+T  + S +A  ++ VL +  + E+CP  L PT+SA+  L
Sbjct: 104 SYEISLLIPVLIENNIPIIALTGNSNSPLAVQSNCVLNIQIQREACPMELVPTSSAVNAL 163

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
            +GDAL ++L+  + FS   F   HPGG LG  L  C   VM  G+ I  V     ++DA
Sbjct: 164 MMGDALTMSLMRYKGFSIEKFAQFHPGGTLGAQLLNCVHHVMRIGNKISKVFWKSTVMDA 223

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDT 300
           +  L     G  AV D+ Q + G+ T+ D+ R   +   +L  S+   M K    + ++ 
Sbjct: 224 MFELLRTGLGLTAVCDDNQYVIGVFTDEDLRRWIIQQDKSLKDSICIAMTKPGHYVAQEC 283

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +  A+++L + NI+   VVD     +G +   DL +  II
Sbjct: 284 RVDEAIKILYKLNITAAPVVDKSGILVGSISINDLYKVKII 324


>gi|83720881|ref|YP_441909.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|83654706|gb|ABC38769.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia
           thailandensis E264]
          Length = 333

 Score =  182 bits (463), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/312 (37%), Positives = 170/312 (54%), Gaps = 12/312 (3%)

Query: 15  GHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           G S M +     + R +   E R L+ L +     +   F  AV+ I    GRVV+ G+G
Sbjct: 19  GGSQMNDYNYLDSARQVFDIESRALAGLSA----RVDESFGDAVDAILRSSGRVVVCGMG 74

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSG IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ +
Sbjct: 75  KSGIIGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTPADTFLAISYSGETDEVIKLIPF 134

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L
Sbjct: 135 LKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTL 194

Query: 194 LESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           +++R F   +F   HPGG LG  L     D M +GD +P V      ID + +++  R G
Sbjct: 195 MKARGFRPENFARFHPGGSLGRRLLSKVDDEMAAGD-LPFVDERAQAIDVLQVMTRGRLG 253

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLL 309
              V  E     GIIT+GD+ R      +TL      D+M K+P ++   T +  A+ ++
Sbjct: 254 LAIVRRETG--FGIITDGDVRRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMM 311

Query: 310 RQHNISVLMVVD 321
               I+ L+V D
Sbjct: 312 ETRRINALLVFD 323


>gi|167580751|ref|ZP_02373625.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis TXDOH]
          Length = 311

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 112/292 (38%), Positives = 163/292 (55%), Gaps = 11/292 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+ L +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+TLASTGTPS
Sbjct: 17  ESRALAGLSA----RVDESFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATLASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     D M +GD +P V      ID + +++  R G   V  E     GI+T+GD+
Sbjct: 193 GRRLLSKVDDEMAAGD-LPFVDERAQAIDVLQVMTRGRLGLAIVRRETG--FGIVTDGDV 249

Query: 273 FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            R      +TL      D+M K+P ++   T +  A+ ++    I+ L+V D
Sbjct: 250 RRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMMEMRRINALLVFD 301


>gi|297581727|ref|ZP_06943649.1| arabinose-5-phosphate isomerase [Vibrio cholerae RC385]
 gi|297534134|gb|EFH72973.1| arabinose-5-phosphate isomerase [Vibrio cholerae RC385]
          Length = 309

 Score =  182 bits (462), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/303 (37%), Positives = 166/303 (54%), Gaps = 10/303 (3%)

Query: 30  SIIAEKRGLSSLE----SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           S+I   R +  +E     SL  +L  QF  AV+ I A  GR +I G+GKSG +G K+A++
Sbjct: 2   SVIERAREVLDIEIQGLRSLSQQLDKQFEKAVQVILATHGRTIICGMGKSGIVGKKIAAS 61

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + +     LIA+T
Sbjct: 62  LASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLKDNGNYLIAMT 121

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A   L +    E+CP  LAPT S    +A+GDAL I L+E R F   +F 
Sbjct: 122 GNRLSTLAKAAHCHLNIAVPQEACPLQLAPTASTTATIAMGDALTICLMEERKFQPENFA 181

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HPGG LG  L    SD M   +++P+V         I ++S  + G ++VV       
Sbjct: 182 RFHPGGSLGRKLMRRVSDEM-VAENLPIVSSTATFKTVIEVISSGKLG-LSVVQYSNGSL 239

Query: 265 GIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GD+ R+     K    L   D+    P  I  D ++  A +L+ +H +S L+VV+
Sbjct: 240 GVITDGDLRRSMEANGKSAFDLLASDIASVKPFTIRSDAMMQEAFELMDKHKVSCLLVVE 299

Query: 322 DCQ 324
             Q
Sbjct: 300 RNQ 302


>gi|167618855|ref|ZP_02387486.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis Bt4]
 gi|257138078|ref|ZP_05586340.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
          Length = 311

 Score =  182 bits (462), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/292 (38%), Positives = 163/292 (55%), Gaps = 11/292 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+ L +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+TLASTGTPS
Sbjct: 17  ESRALAGLSA----RVDESFGDAVDAILRSSGRVVVCGMGKSGIIGRKIAATLASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTPADTFLAISYSGETDEVIKLIPFLKSNRNYLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 QAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L     D M +GD +P V      ID + +++  R G   V  E     GIIT+GD+
Sbjct: 193 GRRLLSKVDDEMAAGD-LPFVDERAQAIDVLQVMTRGRLGLAIVRRETG--FGIITDGDV 249

Query: 273 FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            R      +TL      D+M K+P ++   T +  A+ ++    I+ L+V D
Sbjct: 250 RRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMMETRRINALLVFD 301


>gi|291288309|ref|YP_003505125.1| KpsF/GutQ family protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290885469|gb|ADD69169.1| KpsF/GutQ family protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 295

 Score =  182 bits (461), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 107/257 (41%), Positives = 156/257 (60%), Gaps = 7/257 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +Q A      E + +SSL   L       F   +  I   KGR+VI G+GKSGHI
Sbjct: 1   MKHDLIQLAKNVFELEAKAVSSLTKKLDD----TFIEVLNMIFNSKGRLVICGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTPSFF+H  EA HGDLGM+T  D+I+++S SG ++E+  ++   +   
Sbjct: 57  GKKIAATLASTGTPSFFMHPGEAYHGDLGMLTDYDIIMLISNSGETEEIIKLIPTLKYRK 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I+ITS   S ++  +D  L +    E+C  GLAPTTS    LA+GDALA+ L++  +
Sbjct: 117 IPMISITSNPLSTLSKLSDFNLDIGMHDEACLLGLAPTTSTTSTLAMGDALAVCLMQMHD 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   +F + HPGG LG  L     D+M    ++P+V       D + ++++ R G + +V
Sbjct: 177 FKPENFAMFHPGGSLGRKLLTKVKDIM-VDKNLPIVAPETGFADILHVITQCRLG-ICIV 234

Query: 258 DEGQKLKGIITEGDIFR 274
            EG+KL GIIT+GD+ R
Sbjct: 235 MEGEKLLGIITDGDLRR 251


>gi|149178364|ref|ZP_01856955.1| hypothetical protein PM8797T_08444 [Planctomyces maris DSM 8797]
 gi|148842782|gb|EDL57154.1| hypothetical protein PM8797T_08444 [Planctomyces maris DSM 8797]
          Length = 347

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/314 (34%), Positives = 175/314 (55%), Gaps = 11/314 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHC-AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           I +E   L  +  +L  EL     C AV+ I + KG V++TG+GK+G IG K+ +TL+ST
Sbjct: 25  IFSEADALRQMGRALGTEL-----CDAVDLIMSRKGAVILTGMGKAGLIGQKICATLSST 79

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GT S F+H AEA HGDLG +  +D I+ LS SG ++EL+ +L   ++ ++P+I IT+   
Sbjct: 80  GTRSHFLHPAEAIHGDLGCLHAEDTILALSNSGETEELRRLLPLIQKMNLPIIGITARTT 139

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +     +VL L    E+ PH LAP+T+    LA+GDAL++ + ++R FS   F   HP
Sbjct: 140 STLGAACQVVLCLGDLKEAGPHQLAPSTTTTAMLAMGDALSLVISKARGFSPLQFATFHP 199

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS--EKRFGCVAVVDEGQKLKGII 267
           GG LG      ++VM   + + +      + +A   LS   +R G V ++D+  ++ GI 
Sbjct: 200 GGSLGRRLTKINEVMRPRNEVRVTGETTSIREAFVRLSLPGRRSGAVIIIDDASRVTGIF 259

Query: 268 TEGDIFRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T+ D+ R   +  +      +  VM + P  I +D  L  A+ LL+   +S L VVD  Q
Sbjct: 260 TDSDLARLLEERRDEQLDQPISQVMTRKPTTIHDDASLEAAIDLLKARKLSELPVVDRGQ 319

Query: 325 KAIGIVHFLDLLRF 338
             +G++   D++ +
Sbjct: 320 HLVGLIDITDVIGW 333


>gi|38145969|emb|CAE11289.1| D-arabinose-5-phosphate isomerase [Neisseria meningitidis]
          Length = 315

 Score =  182 bits (461), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 117/320 (36%), Positives = 174/320 (54%), Gaps = 11/320 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + ++ A+ ++  E   +  +   L  E    F  A+E I   +GRVV+ G+GKSG I
Sbjct: 1   MKTNFLKLAVETLQLEANAIMEMSKRLDNE----FEKAIEIILNTQGRVVVVGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T+ASTGT +FFVH  EA HGDLGMI   D+ +++S SG ++E+  IL + +   
Sbjct: 57  GQKLAATMASTGTSAFFVHPGEAFHGDLGMIKPIDVALLISNSGETEEIIRILPFLKEQG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T   KS +A HA  +L +    E+C + LAPT+S    LA+GDALA+ L   + 
Sbjct: 117 NKIIAMTGNIKSTLAKHAHSLLDISVSREACSNNLAPTSSTTCTLAMGDALAMVLQSEKK 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG  L    SDVM +   IP         + +  ++    G   V+
Sbjct: 177 FLPEDFARFHPGGSLGRRLLTRVSDVMKT--KIPHCLPDASFKEIVYSINRGYMGLTLVM 234

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E   L GIIT+GD+ R F +  ++N +  +D+M  +PK +  D     A   +    I 
Sbjct: 235 -EHDTLHGIITDGDLRRAFDRFDNINQIKAKDIMSLSPKYVSADARFAEAEAYMHAEKID 293

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L VV +  K IG+++  D+
Sbjct: 294 SL-VVKESNKVIGVLNIYDI 312


>gi|153831116|ref|ZP_01983783.1| sugar isomerase, KpsF/GutQ family [Vibrio cholerae 623-39]
 gi|148873406|gb|EDL71541.1| sugar isomerase, KpsF/GutQ family [Vibrio cholerae 623-39]
          Length = 309

 Score =  181 bits (460), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 120/313 (38%), Positives = 174/313 (55%), Gaps = 19/313 (6%)

Query: 30  SIIAEKRGLSSLE----SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           S+I   R +  +E     SL  +L  QF  AV+ I A  GR +I G+GKSG +G K+A++
Sbjct: 2   SVIKRAREVLDIEIQGLRSLSQQLDKQFEKAVQVILATHGRTIICGMGKSGIVGKKIAAS 61

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + +     LIA+T
Sbjct: 62  LASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLKDNGNYLIAMT 121

Query: 146 SENKSVVA----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
               S +A    CH +I   +P+  E+CP  LAPT S    +A+GDAL I L+E R F  
Sbjct: 122 GNRLSTLAKAAYCHLNI--AVPQ--EACPLQLAPTASTTATIAMGDALTICLMEERKFQP 177

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F   HPGG LG  L    SD M   +++P+V         I ++S  + G ++VV   
Sbjct: 178 ENFARFHPGGSLGRKLLRRVSDEMVV-ENLPIVSSTATFKTVIEVISSGKLG-LSVVQYS 235

Query: 261 QKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
               G+IT+GD+ R+     K    L   D+    P  I  D ++  A +L+ +H +S L
Sbjct: 236 NGSLGVITDGDLRRSMEANGKSAFDLLASDIASVKPLTIRSDAMMQEAFELMDKHKVSCL 295

Query: 318 MVVDDCQKAIGIV 330
           +VV+  Q  +GIV
Sbjct: 296 LVVERNQ-FVGIV 307


>gi|149196518|ref|ZP_01873572.1| Sugar isomerase, KpsF/GutQ family protein [Lentisphaera araneosa
           HTCC2155]
 gi|149140198|gb|EDM28597.1| Sugar isomerase, KpsF/GutQ family protein [Lentisphaera araneosa
           HTCC2155]
          Length = 323

 Score =  180 bits (457), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/311 (33%), Positives = 179/311 (57%), Gaps = 4/311 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E +G+ S+   L    + QF     K    K ++V++GIGKSG I  K+ASTL+STG+ +
Sbjct: 14  ESKGIQSIADQLDERFN-QFISICLKALKNKNKLVLSGIGKSGQIAQKMASTLSSTGSRA 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+H  EA HGDLGM+  DD+ I LS+SG +DEL  ++   +R  + ++++T    S + 
Sbjct: 73  VFIHPVEAMHGDLGMMYDDDVFIGLSYSGETDELLKVIPAVKRLGLEVLSLTGNVDSSLG 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             + I L    + E+CP  LAPTT+    LA+GDA+A+ L++   F  ND+  LHP G +
Sbjct: 133 KSSSISLPCKIDSEACPFNLAPTTTTTAMLALGDAIAMVLMDIHEFKINDYGKLHPSGAI 192

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  + +   D+M +GD + +++    + +A+  + + + G   + ++ + L GI T GD+
Sbjct: 193 GRAITLTVDDLMRTGDRVAVIEPDTLVQEAVLAMCKSKGGMSIISNQDKDLLGIFTTGDL 252

Query: 273 FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   KDL+ L   V ++M+K+P  + +  +    + +LR+ NI+ + VVD   K  G++
Sbjct: 253 KRGIAKDLDFLKRKVSEIMVKSPIKLNKSQMAVDILDILREKNINAIPVVDQDDKVCGVI 312

Query: 331 HFLDLLRFGII 341
              DL +F ++
Sbjct: 313 DIQDLPKFKVM 323


>gi|172065194|ref|YP_001815906.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
 gi|171997436|gb|ACB68353.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
          Length = 310

 Score =  180 bits (457), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/303 (35%), Positives = 165/303 (54%), Gaps = 9/303 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ + ++ A +    E R L+ + + L       F  AVE + A  GRVV+ G+GKSG +
Sbjct: 1   MRQNHIESARQVFEIESRALAGVAARLDA----NFEEAVEIVLASNGRVVVCGMGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STGTP+FF+H  EA HGDLGM+T DD  + +S SG +DE+  ++ + R   
Sbjct: 57  GRKIAATLSSTGTPAFFMHPGEAYHGDLGMVTPDDAFLAISNSGETDEVIKLIPFLRSNG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T    S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R 
Sbjct: 117 NDLIALTGNPASTLAHAARVHLDIGVEREACPLQLAPTASTTATLAMGDALAVTLMRARG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F    F   HPGG LG   +   D   +  ++P V      +D +  ++  R G +A+V 
Sbjct: 177 FQPEHFARFHPGGSLGRRLLSTVDDEMARRNLPFVTEDTSTLDVLDAMTRGRLG-LAIVK 235

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                 GI+T+GDI R   +  + +   +  D+M   P  +   T +  A+ L++Q  I 
Sbjct: 236 RHAGW-GIVTDGDIRRAIERHGDGVLRRTAADMMSIEPSTVRPGTRVEDALLLMQQQRIG 294

Query: 316 VLM 318
            L+
Sbjct: 295 ALL 297


>gi|46447416|ref|YP_008781.1| putative Gut Q protein [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401057|emb|CAF24506.1| putative Gut Q protein [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 319

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 104/291 (35%), Positives = 167/291 (57%), Gaps = 7/291 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE +   +  +  TG+GKSG +  K+A T+ STGT + ++   +A HGD+G++++DD+ I
Sbjct: 29  VELLLETEKSIFFTGVGKSGLVAKKIALTMVSTGTKALYLSPTDAVHGDIGIVSQDDIFI 88

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG SDEL  ++   R     L+A+    +S +A     V+TLP + E CP  +APT
Sbjct: 89  MLSKSGESDELLNLVPPIRNKGGILVAVVCNPQSRLAAACHYVITLPFQEELCPFDMAPT 148

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKI 235
            S I Q   GD +  AL+  +NFS ND+ + HP G++G  + +   D+M +G+ +P+   
Sbjct: 149 MSTIFQGLFGDLVTAALMRRKNFSLNDYALNHPSGRIGKRMTLKVKDIMLTGEKVPICYP 208

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKN 292
              L + +  LS KR GC+ VVD   +L GI T+GD+ R   K    +   S+ ++M  N
Sbjct: 209 QDQLTNVLVELSNKRCGCILVVDRDHRLLGIFTDGDLRRMLQKVGGKVLESSMIEIMTPN 268

Query: 293 PKVILEDTLLTVAMQLLRQ---HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P+ I  + L   AM+L+       ISV  V++  Q+ IG++H  DL++ G+
Sbjct: 269 PRSIESELLAYEAMKLMEADYCKRISVFPVLNLEQQVIGLLHIHDLIQTGL 319


>gi|225155922|ref|ZP_03724407.1| Arabinose-5-phosphate isomerase [Opitutaceae bacterium TAV2]
 gi|224803375|gb|EEG21613.1| Arabinose-5-phosphate isomerase [Opitutaceae bacterium TAV2]
          Length = 335

 Score =  180 bits (456), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/335 (35%), Positives = 182/335 (54%), Gaps = 11/335 (3%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +L   S +  A   +  E+  + +  +SL  +           I+A + +++ TG+GKS 
Sbjct: 2   ALASKSVINHARECLQIEQDAIDATRASLDTQFVNVVRAVQSAIEAGR-KLIFTGVGKSA 60

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  KLA T  STG PS F+ A +A HGDLG+    D++I+LS SG SDE+  ++   +R
Sbjct: 61  HISIKLAGTFNSTGIPSCFLDATQALHGDLGLCAEGDVVILLSNSGQSDEVIKLVTLLKR 120

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F + ++A TS   S +A H  + L      E+CP G+APT S    LA+GDALA+ LL+ 
Sbjct: 121 FGVVIVAFTSNPDSELARHTPLRLLYRVPREACPLGIAPTASTTAALALGDALAMVLLKI 180

Query: 197 RNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R  + NDF   HP G LG  L +  SD+M +GD +P+      L DAI  +++ + G +A
Sbjct: 181 RGLTRNDFARFHPAGNLGRILLLRVSDIMRTGDRLPVAPETVTLQDAILRMTKAKSGSIA 240

Query: 256 VVDEGQ-------KLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           +V   +       KL GI+T+GD  R+     D     V + M ++PK I +D L   A+
Sbjct: 241 LVSTARKPGGGGGKLTGILTDGDFRRSALTGPDFLQKPVSEFMTRSPKTIRDDALGVDAL 300

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++  QH I  L+VVD   + +G+V   DL +  I+
Sbjct: 301 RVFEQHKIDDLIVVDRSGRPVGLVDGQDLPKLKIV 335


>gi|327539397|gb|EGF26013.1| KpsF/GutQ family protein [Rhodopirellula baltica WH47]
          Length = 388

 Score =  179 bits (454), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/286 (38%), Positives = 166/286 (58%), Gaps = 8/286 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I   +G +V+TG+GK+G I  KL +TLASTG+P+ F+H  EA HGDLG +   DL+I LS
Sbjct: 70  ISRCEGSIVLTGVGKAGLIAQKLVATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIALS 129

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG S+E+  ++ Y +  +  +IA+T++ ++ +A  AD V+ + +  E+CP GLAPT+S 
Sbjct: 130 NSGRSEEVVRVVEYLKHQACGIIAVTADRENPLAELADHVVPIGRHREACPDGLAPTSST 189

Query: 180 IMQLAIGDALAIALLESR--NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
            + LA+GD  AIA+L SR   F+ NDF   HPGG LG         M       L     
Sbjct: 190 SVMLAVGD--AIAVLASRLCGFTPNDFARFHPGGALGRKLTDVRQAMRPLAECRLAPQTI 247

Query: 238 PLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTL--SVEDVMIKNP 293
            + +A+ I  + +R G + ++DE ++L GI T+ D+ R   H+   +L   +E  M K P
Sbjct: 248 SIREAMMIGGAGRRSGAILLLDESERLAGIFTDSDLARLLQHRQETSLDEPIELFMTKQP 307

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             I +D  L  A+++L Q  IS L VVD   + IG++   DL+  G
Sbjct: 308 ICIADDERLPRAVEILSQRKISELPVVDSDHRPIGMIDITDLVATG 353


>gi|32491076|ref|NP_871330.1| hypothetical protein WGLp327 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166283|dbj|BAC24473.1| yrbH [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 327

 Score =  179 bits (453), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 173/308 (56%), Gaps = 7/308 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           EK G+  L+  +  +    F    E +    G++   GIGKSGHI  KL+ST +STG+PS
Sbjct: 23  EKNGICKLKKCINRD----FQKIGELLLKCNGKIATMGIGKSGHIARKLSSTFSSTGSPS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLG +  +D++I +S SG S E+ +++YY   F+I  I+IT    S ++
Sbjct: 79  FFIHPTEAGHGDLGSLCSNDIVIAISNSGESKEIISLIYYLNNFNITYISITGNPLSTMS 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             + I L++    E+C  GL+PTTS+   L +GDALAI+L  ++ F+  +F  LHPGG L
Sbjct: 139 KLSKINLSIKVTKEACSLGLSPTTSSTAALVMGDALAISLSIAKGFNIKNFSFLHPGGIL 198

Query: 214 G-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G  L +  +D+M     +P+V     + D I  +++K FG   +++  + +KG+    ++
Sbjct: 199 GKKLSLRVNDIMRKKIDVPIVYSTYSIFDTIVKITKKNFGIAVILNNNKTIKGVFNFKNL 258

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + +  +LN   S+  VM  N   I  D L+  A ++++      L+V      + GI+H
Sbjct: 259 KKIYKLNLNLNDSISTVMNINFNQINPDILVEKAFKIMQSIKTDYLLVSIKNYFS-GIIH 317

Query: 332 FLDLLRFG 339
             D+ ++G
Sbjct: 318 INDIKKYG 325


>gi|32476096|ref|NP_869090.1| hypothetical protein RB9823 [Rhodopirellula baltica SH 1]
 gi|32446640|emb|CAD76476.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 419

 Score =  178 bits (452), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 165/286 (57%), Gaps = 8/286 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I   +G +V+TG+GK+G I  KL +TLASTG+P+ F+H  EA HGDLG +   DL+I  S
Sbjct: 101 ISRCEGSIVLTGVGKAGLIAQKLVATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIAFS 160

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG S+E+  ++ Y +  +  +IA+T++ ++ +A  AD V+ + +  E+CP GLAPT+S 
Sbjct: 161 NSGRSEEVVRVVEYLKHQACGIIAVTADRENPLAELADHVVPIGRHREACPDGLAPTSST 220

Query: 180 IMQLAIGDALAIALLESR--NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
            + LA+GD  AIA+L SR   F+ NDF   HPGG LG         M       L     
Sbjct: 221 SVMLAVGD--AIAVLASRLCGFTPNDFARFHPGGALGRKLTDVRQAMRPLAECRLAPQTI 278

Query: 238 PLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTL--SVEDVMIKNP 293
            + +A+ I  + +R G + ++DE ++L GI T+ D+ R   H+   +L   +E  M K P
Sbjct: 279 SIREAMMIGGAGRRSGAILLLDESERLAGIFTDSDLARLLQHRQETSLDEPIELFMTKQP 338

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             I +D  L  A+++L Q  IS L VVD   + IG++   DL+  G
Sbjct: 339 ICIADDERLPRAVEILSQRKISELPVVDSDHRPIGMIDITDLVATG 384


>gi|262276741|ref|ZP_06054534.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
 gi|262223844|gb|EEY74303.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
          Length = 324

 Score =  178 bits (451), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/298 (34%), Positives = 167/298 (56%), Gaps = 5/298 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L+  F  AV  I   KG +V +G+GKS  I  K   T +S G PS+ + A++A+HG
Sbjct: 25  LHKNLNINFSKAVNLINNTKGNIVFSGVGKSKLILEKTCGTFSSLGVPSYVLDASQATHG 84

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
            LG +  +D +I+ S SG+++EL AI  +A+++ I +I I+S +KS +  ++DI +  PK
Sbjct: 85  SLGNLKNNDTLIIASNSGNTNELIAIFKFAKKYRIKIIGISSNSKSQLFKNSDINIVYPK 144

Query: 165 EPE--SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             E       L PT+S     AIGDALAI++ + R F+  DF   HPGG++G       D
Sbjct: 145 VKEIGDSNFKLVPTSSTTTLSAIGDALAISVAKLRGFTIRDFSQAHPGGQIGKALTSIKD 204

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDL 280
           ++ +  +IP V         +++++ KR GC  V D+ +K   I+T+GD  R    +K+L
Sbjct: 205 LLITHKNIPFVNNEASFSKILSVIASKRLGCALVKDKKRKKISIVTDGDCSRAAAKYKNL 264

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +D+M KNP    E TL+  A+ ++ +  I+VL++     K  G+V    +L F
Sbjct: 265 SLIKAKDIMTKNPSYTDEKTLVPDALTIMNKKRITVLLIKSKG-KFKGLVSIHSILEF 321


>gi|167563928|ref|ZP_02356844.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis EO147]
 gi|167571062|ref|ZP_02363936.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis C6786]
          Length = 311

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/299 (37%), Positives = 163/299 (54%), Gaps = 10/299 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E R L+ L +     +   F  AV+ I    GRVV+ G+GKSG IG K+A+TLASTGTPS
Sbjct: 17  ESRALAGLSA----RVDESFGDAVDAILHSSGRVVVCGMGKSGIIGRKIAATLASTGTPS 72

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +     L+A+T   +S +A
Sbjct: 73  FFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSNRNHLVALTGNARSTLA 132

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             A   L +  E E+CP  LAPT+S    LA+GDALA+ L+++R F   +F   HPGG L
Sbjct: 133 RAAHSHLDVGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKARGFRPENFARFHPGGSL 192

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +   D   +   +P V      ID +  ++  R G   V  E     GIIT+GDI 
Sbjct: 193 GRRLLSKVDDEMAAHDLPFVDAHAQAIDVLQAMTRGRLGLAIVRCETG--WGIITDGDIR 250

Query: 274 R--NFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           R    H D L      D+M  +P ++   T +  A+ L+    I+ L+ V D +  +G+
Sbjct: 251 RAVETHGDALFRRVAADLMSSDPAMVRLGTRVEDALLLMETRRINALL-VSDGEDVVGV 308


>gi|315125560|ref|YP_004067563.1| arabinose-5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
 gi|315014073|gb|ADT67411.1| arabinose-5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
          Length = 310

 Score =  177 bits (449), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/320 (35%), Positives = 179/320 (55%), Gaps = 20/320 (6%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M   ++Q A   I  E  GL  + S L       F  AV KI +  GR +I G+GKSG I
Sbjct: 1   MDFKSIQIAKEVIQTEIDGLVYMSSLLDD----SFAKAVNKIISTSGRTIICGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++ ASTGTPSFF+H  EA HGDLGM+   D+ I +S SG +DE+  +L + +   
Sbjct: 57  GKKIAASFASTGTPSFFMHPGEAFHGDLGMVKHKDIFIAISNSGETDEVLKLLPFLKDNG 116

Query: 139 IPLIAITSENKSVVA----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
             +IAIT    S ++    CH DI  ++PK  E+CP  LAPT+S    L +GDAL +AL+
Sbjct: 117 NFIIAITGNVNSTLSQNSHCHLDI--SVPK--EACPLQLAPTSSTTATLVMGDALTVALM 172

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++R+F   +F   HPGG LG  L    +D M++ +S+P++      I+ +  + + + G 
Sbjct: 173 DARDFKPENFARFHPGGNLGRRLLSKVADEMYT-ESLPVISPNSSFIEVVHSIGKGKLG- 230

Query: 254 VAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           +A+V+      GIIT+GDI R     +K    L   D+   NP  +L  + +  A+ ++ 
Sbjct: 231 IAIVEFSNHF-GIITDGDIRRTMDCKYKAAFDLQASDIATHNPLSVLVSSRVHEAISVME 289

Query: 311 QHNISVLMVVDDCQKAIGIV 330
              ++ L+V+D  +  +G++
Sbjct: 290 SKKVNTLLVMDG-ENLVGVI 308


>gi|145641070|ref|ZP_01796651.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
 gi|145274231|gb|EDK14096.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.4-21]
          Length = 240

 Score =  177 bits (448), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 89/194 (45%), Positives = 129/194 (66%), Gaps = 4/194 (2%)

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 1   MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 60

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 61  IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 120

Query: 202 NDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG   +C   D M +   +P +       D +T+++E R G VA+V E 
Sbjct: 121 ADFAKFHPGGSLGRRLLCKVKDQMQT--RLPTILPTTNFTDCLTVMNEGRMG-VALVMEN 177

Query: 261 QKLKGIITEGDIFR 274
           ++LKGIIT+GDI R
Sbjct: 178 EQLKGIITDGDIRR 191


>gi|115360926|ref|YP_778063.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
 gi|115286254|gb|ABI91729.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
          Length = 291

 Score =  176 bits (447), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 154/279 (55%), Gaps = 5/279 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + +   L   F  AVE + A  GRVV+ G+GKSG +G K+A+TL+STGTP+FF+H  EA 
Sbjct: 2   AGVAARLDANFEEAVEIVLASNGRVVVCGMGKSGIVGRKIAATLSSTGTPAFFMHPGEAY 61

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+T DD  + +S SG +DE+  ++ + R     LIA+T    S +A  A + L +
Sbjct: 62  HGDLGMVTPDDAFLAISNSGETDEVIKLIPFLRSNGNDLIALTGNPASTLAHAARVHLDI 121

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             E E+CP  LAPT S    LA+GDALA+ L+ +R F    F   HPGG LG   +   D
Sbjct: 122 GVEREACPLQLAPTASTTATLAMGDALAVTLMRARGFQPEHFARFHPGGSLGRRLLSTVD 181

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +  ++P V      +D +  ++  R G +A+V       GI+T+GDI R   +  + 
Sbjct: 182 DEMARRNLPFVTEDTSTLDVLDAMTRGRLG-LAIVKRHAGW-GIVTDGDIRRAIERHGDG 239

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   +  D+M   P  +   T +  A+ L++Q  I  L+
Sbjct: 240 VLRRTAADMMSIEPSTVRPGTRVEDALLLMQQQRIGALL 278


>gi|261884782|ref|ZP_06008821.1| KpsF/GutQ [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 262

 Score =  175 bits (444), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 100/247 (40%), Positives = 156/247 (63%), Gaps = 4/247 (1%)

Query: 30  SIIAEKRGLSSLESSLQGEL-SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           SI  E   L + E   Q EL  F+F  AV    + KG+++I+G+GKSG +G+K+A+TLAS
Sbjct: 14  SIAKEVLSLEADELKRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVGAKIAATLAS 73

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTPSFF+H  EA HGDLGMI+++D ++ +S+SG S EL  IL + ++  I +I + +++
Sbjct: 74  TGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGIKIIGM-AKS 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   +D  ++L    E+CP G APT S  + LA+GDALA+ L++ + F + DF +LH
Sbjct: 133 GSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEFKKEDFAMLH 192

Query: 209 PGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L++   DVM   D +P+V     L  AI  ++  + G V + ++   L  ++
Sbjct: 193 PGGSLGKRLYLKVKDVMRK-DELPIVSDDVSLKFAINSMTHGKLGTVLLTNKNGLLVTVL 251

Query: 268 TEGDIFR 274
           ++GD+ R
Sbjct: 252 SDGDLRR 258


>gi|239995073|ref|ZP_04715597.1| arabinose-5-phosphate isomerase [Alteromonas macleodii ATCC 27126]
          Length = 324

 Score =  175 bits (443), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/320 (34%), Positives = 171/320 (53%), Gaps = 8/320 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K   L     +  A R I  E  GL+S+ + L GE    F  +V KI   +GRV+I G+G
Sbjct: 8   KTEELNSEKILNTASRVIDIEINGLTSVRNKL-GE---SFVKSVYKIVNSQGRVIICGMG 63

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSG IG K+A++LASTGTPSF +H  EA HGDLGM+   D+ + +S SG ++EL  +L +
Sbjct: 64  KSGIIGKKIAASLASTGTPSFSMHPGEAFHGDLGMVHPSDIFVAISNSGETEELLKLLPF 123

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            R     +IAIT    S +  ++   + +    E+CPH LAPT S    LA+GDAL +AL
Sbjct: 124 LRDNGNCVIAITKNKNSTLGLNSWATIEIAVPEEACPHQLAPTASTTATLAVGDALTVAL 183

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           +E R F+  +F   HPGG LG   +           IP +       + ++ +S+ + G 
Sbjct: 184 MELRRFTPENFARFHPGGSLGRRLLSKVKDEMLALPIPFLNPTSSFTEIVSSISQGKLGF 243

Query: 254 VAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           V V +   K   +IT+GD+ R   ++  D+ ++   D+    P  +     +  A  L+ 
Sbjct: 244 VIVNNGKTKDYSVITDGDLRRAMEHYGTDVFSIKAHDIASVMPHTVSHSASMEHAYSLMD 303

Query: 311 QHNISVLMVVDDCQKAIGIV 330
            H I  L+VVD+ ++ +G++
Sbjct: 304 IHKIGFLLVVDN-EELVGVL 322


>gi|168058158|ref|XP_001781077.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667474|gb|EDQ54103.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 319

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 175/324 (54%), Gaps = 19/324 (5%)

Query: 28  LRSIIAE-KRGLSSL-----ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           LR + AE KR L         S LQ        C        KG +  +GIGKSG I  K
Sbjct: 4   LRQLFAEQKRYLDYFFDHIDYSQLQNFTQLLLEC--------KGVIFFSGIGKSGFIAQK 55

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +  TL STGT S F+    A HGD+G++   D+++V S SG+++EL  ++   R     +
Sbjct: 56  ICQTLVSTGTKSVFLSPTNALHGDIGIVGPKDIVVVFSKSGATEELLKLVPCVRAKGAYI 115

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + ++S N+S+VA   D+ + LP E E CP  LAP TS  +Q+  GD +AIAL++++N + 
Sbjct: 116 VGVSSHNESMVAEFCDMHVYLPLERELCPFDLAPVTSTAIQMLFGDTVAIALMQAKNLTR 175

Query: 202 NDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            ++ + HP G++G  L +   DVM  G  +P+ +    +I+ +  LS +  GC+ VVD  
Sbjct: 176 EEYAMNHPAGRIGKRLTLRVQDVMKKGADLPICRESDLMIEQLVELSARGCGCLLVVDSA 235

Query: 261 QKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISV 316
           ++L G  T+GD+ R+ H    T+   +V ++  ++P+ IL D + + AM  + Q   +  
Sbjct: 236 KRLVGTFTDGDLRRSLHPFAETIFKVTVRELCNRSPRTILVDAMASEAMTRMEQQPVVEF 295

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L +V+     +G+V    L+  G+
Sbjct: 296 LPIVNHANILVGLVTLRGLVAAGL 319


>gi|270659742|ref|ZP_06222389.1| polysialic acid capsule expression protein KpsF [Haemophilus
           influenzae HK1212]
 gi|270316919|gb|EFA28616.1| polysialic acid capsule expression protein KpsF [Haemophilus
           influenzae HK1212]
          Length = 189

 Score =  174 bits (441), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 86/170 (50%), Positives = 116/170 (68%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F+  V+ I A KGR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HG
Sbjct: 16  LSQRLGEDFNQVVDLILACKGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHG 75

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLGM+   D+++++S+SG +D+   ++   + F   +IA+TS   S +A HAD VL +  
Sbjct: 76  DLGMLKPIDIVMLISYSGETDDANKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITV 135

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG
Sbjct: 136 EREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPEDFAKFHPGGSLG 185


>gi|59710786|ref|YP_203562.1| arabinose-5-phosphate isomerase [Vibrio fischeri ES114]
 gi|59478887|gb|AAW84674.1| arabinose-5-phosphate isomerase [Vibrio fischeri ES114]
          Length = 310

 Score =  173 bits (439), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/317 (37%), Positives = 169/317 (53%), Gaps = 19/317 (5%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S++  A + I  E  GL  +   L  E    F  A+  I   KGR +I G+GKSG IG K
Sbjct: 3   SSIDIAKQVIQTEIEGLDYMAKRLGSE----FEVAINAIINTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLRDNGNFV 118

Query: 142 IAITSENKSVVA----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           IAIT +  S +A    CH DI  ++PK  E+CP  LAPT+S    L +GDAL +AL++ R
Sbjct: 119 IAITGKENSTLATNSHCHLDI--SVPK--EACPLQLAPTSSTTATLVMGDALTVALMDVR 174

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   +F   HPGG LG  L     D M S D+IP V         I  +S    G   V
Sbjct: 175 EFQPENFARFHPGGSLGRRLLSKVQDEMFS-DNIPSVASDADFTSIIHKISSSHLGLTLV 233

Query: 257 VDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             +   L  IIT+GD+ R      +D   L  +D+   NP  I  ++ +  A +++    
Sbjct: 234 NLKDDSL-AIITDGDLRRAMESKGRDAFDLVAKDIASINPASISPESNIQKAYEIMESKG 292

Query: 314 ISVLMVVDDCQKAIGIV 330
           I+ L+VV +    +GI+
Sbjct: 293 ITSLIVV-ESNSVVGIL 308


>gi|302753812|ref|XP_002960330.1| hypothetical protein SELMODRAFT_75684 [Selaginella moellendorffii]
 gi|300171269|gb|EFJ37869.1| hypothetical protein SELMODRAFT_75684 [Selaginella moellendorffii]
          Length = 328

 Score =  172 bits (437), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 100/285 (35%), Positives = 169/285 (59%), Gaps = 6/285 (2%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A +G V  +G+GKSG+I  K++ TL STGT S F++  +A HGD+GM+   DL+++LS S
Sbjct: 44  AAEGVVFFSGVGKSGYIAQKISQTLVSTGTKSVFLNPTDALHGDIGMVGSKDLVVLLSKS 103

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G+++EL  ++   R     ++ I+S   S ++   D+ + LP E E CP  LAP TS  +
Sbjct: 104 GATEELLRLVPCLRARGAFVVGISSLLNSQLSRVCDMHVHLPLERELCPFDLAPVTSTAI 163

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLI 240
           Q+ +GD +AIAL++++N +  ++ + HP G++G  L     DVM  GD +PL K    ++
Sbjct: 164 QMLLGDTVAIALMQAKNLTREEYALNHPAGRIGKRLIFRVRDVMKKGDELPLCKENDLIM 223

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL 297
           + +  LS K  GC+ VVD+ ++L G  T+GD+ R      +++  L+V ++  ++P+   
Sbjct: 224 EQLLELSAKGCGCLLVVDDNRQLLGTFTDGDLRRALKSKREEVFKLTVGEMCNRSPRKTT 283

Query: 298 EDTLLTVAMQLLR--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + +   AMQ++      ++ L VVD+    IGIV   DL+  G+
Sbjct: 284 ANAMAVDAMQIMEGPPSPVTFLPVVDETGIVIGIVKLHDLVSAGL 328


>gi|302767924|ref|XP_002967382.1| hypothetical protein SELMODRAFT_86704 [Selaginella moellendorffii]
 gi|300165373|gb|EFJ31981.1| hypothetical protein SELMODRAFT_86704 [Selaginella moellendorffii]
          Length = 328

 Score =  171 bits (434), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 99/285 (34%), Positives = 168/285 (58%), Gaps = 6/285 (2%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A +G +  +G+GKSG+I  K++ TL STGT S F++  +A HGD+GM+   DL+++LS S
Sbjct: 44  AAEGVIFFSGVGKSGYIAQKISQTLVSTGTKSVFLNPTDALHGDIGMVGSKDLVVLLSKS 103

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G+++EL  ++   R     ++ I+S   S ++   D+ + LP E E CP  LAP TS  +
Sbjct: 104 GATEELLRLVPCLRARGAFVVGISSLLNSQLSRVCDMHVHLPLERELCPFDLAPVTSTAI 163

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLI 240
           Q+  GD +AIAL++++N +  ++ + HP G++G  L     DVM  GD +PL K    ++
Sbjct: 164 QMLFGDTVAIALMQAKNLTREEYALNHPAGRIGKRLIFRVRDVMKKGDELPLCKENDLIM 223

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL 297
           + +  LS K  GC+ VVD+ ++L G  T+GD+ R      +++  L+V ++  ++P+   
Sbjct: 224 EQLLELSAKGCGCLLVVDDNRQLLGTFTDGDLRRALKSKREEVFKLTVGEMCNRSPRKTT 283

Query: 298 EDTLLTVAMQLLR--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + +   AMQ++      ++ L VVD+    IGIV   DL+  G+
Sbjct: 284 ANAMAVDAMQIMEGPPSPVTFLPVVDETGIVIGIVKLHDLVSAGL 328


>gi|187920923|ref|YP_001889955.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
 gi|187719361|gb|ACD20584.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
          Length = 311

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 156/286 (54%), Gaps = 24/286 (8%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+ +I   +GRV++ G+GKSG IG K+A+T ASTGTP+FF+H  EA HGDLGM+T DD+ 
Sbjct: 35  AIARILETRGRVIVCGMGKSGIIGKKIAATFASTGTPAFFMHPGEAYHGDLGMVTSDDVF 94

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA----CHADIVLTLPKEPESCPH 171
           + +S SG + E+  +L + R     +IA+T   +S +A    CH DI +    E E+CP 
Sbjct: 95  LAISNSGETHEVVQLLPFLRNNHNFVIAMTGNRESTLARAGHCHLDIGV----EKEACPL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            LAPT S    LA+GDALA+ L+E+R+F    F   HPGG LG   +         D +P
Sbjct: 151 QLAPTASTTATLAMGDALAVTLMEARDFKPEGFARFHPGGSLGRRLLSTVGDEMVRDRLP 210

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTL 283
            V      ++ ++ ++    G   V DE     G+IT+GD+ R         F K     
Sbjct: 211 FVGPDAKAMEIVSEMTRGSLGIAIVRDETG--WGLITDGDVRRLIEVHGPHAFEK----- 263

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              D M + P ++   T +  A+ LL Q  I+ L+V +  Q+ +G+
Sbjct: 264 CARDFMSREPTMVSPATRVQDALALLDQRRITSLLVFEH-QQIVGV 308


>gi|296123973|ref|YP_003631751.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
 gi|296016313|gb|ADG69552.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
          Length = 391

 Score =  171 bits (433), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/297 (35%), Positives = 155/297 (52%), Gaps = 5/297 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           L   L   F  AVE +   +G V++TGIGK+G IG K+ +TL STG+ ++F+H  EA HG
Sbjct: 47  LSRRLDASFCAAVEYLSNTRGAVIVTGIGKAGLIGQKITATLCSTGSRAYFLHPTEALHG 106

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG +  DD+I+  S SG + EL A+L       IP++++T+   S +   + +V+T+ +
Sbjct: 107 DLGCVGPDDVILAFSNSGETAELLALLPIFEARGIPVVSVTASPVSTLGRASQVVVTMGR 166

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             E    GLAP+TS    LAIGDALA    + R+FS  DF  LHP G LG      S+VM
Sbjct: 167 LHECGVQGLAPSTSTTAMLAIGDALAFVTCKRRSFSARDFARLHPAGTLGRRLTVVSEVM 226

Query: 225 HSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
                + +      + +     S   +R G V +VDE   L GI T+ D+ R   +  + 
Sbjct: 227 RKAQDVRIALETTSVRNVFIGQSRPGRRTGAVMLVDEEGLLTGIFTDSDLARLLEQKRDE 286

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                + +VM   P  I    LL   +QL  +  +S   VVD+    +G+V   D++
Sbjct: 287 QLDAPIRNVMTSRPTTISPTMLLEEVLQLFAERRLSEFPVVDESGHPVGLVDITDMI 343


>gi|254444269|ref|ZP_05057745.1| sugar isomerase, KpsF/GutQ family [Verrucomicrobiae bacterium
           DG1235]
 gi|198258577|gb|EDY82885.1| sugar isomerase, KpsF/GutQ family [Verrucomicrobiae bacterium
           DG1235]
          Length = 326

 Score =  170 bits (431), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 147/279 (52%), Gaps = 3/279 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +++++G+GK+ HI  KL  TL STG PS F+   +A HGDLG+  + D ++  S SG + 
Sbjct: 48  KLILSGVGKNAHICQKLVGTLNSTGAPSTFLDPVQALHGDLGLCRQRDTVVAFSNSGETA 107

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   L   +RF +  IA+T++  S +A   D  L    E E+CP  LAPT S    LAI
Sbjct: 108 ELLRFLPMVQRFDVQTIAVTAKPDSSLAKMCDATLLYAIEREACPLELAPTASTTASLAI 167

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAIT 244
           GDA+A+ LLE    +  DF   HPGG LG +      ++M S   +  +K      D + 
Sbjct: 168 GDAVAMVLLELNALTREDFAKFHPGGALGRVLAPKVEEIMRSTKRLAALKKDATCKDCLA 227

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLL 302
            +S K  GCVA+++    L GI+T+GDI R    H +        VM   P  I   +  
Sbjct: 228 EMSAKSSGCVALLETDGTLAGIMTDGDIRRYILSHPNFLESPASSVMTPKPITIAGGSYA 287

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             A++   +H+I  L+VVD   + IGI+   DL +  I+
Sbjct: 288 AQALKTFEKHSIDDLIVVDSSNRPIGIIDGQDLTKLRIV 326


>gi|308062689|gb|ADO04577.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Cuz20]
 gi|308064181|gb|ADO06068.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Sat464]
          Length = 329

 Score =  170 bits (431), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 166/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|297380587|gb|ADI35474.1| sugar isomerase, KpsF/GutQ family [Helicobacter pylori v225d]
          Length = 327

 Score =  169 bits (429), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 166/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 48  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 108 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 168 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 227 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDAL 286

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 287 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 325


>gi|167041250|gb|ABZ06006.1| putative CBS domain protein [uncultured marine microorganism
           HF4000_005D21]
 gi|167045754|gb|ABZ10400.1| putative SIS domain protein [uncultured marine bacterium
           HF4000_APKG3108]
          Length = 324

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/327 (33%), Positives = 182/327 (55%), Gaps = 12/327 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +Q A +++  E + L  L SS   + S QF  AV  I  IKG+ ++ G+GKS  +G 
Sbjct: 2   NKDLQIAKKTVQTEIQALKRLLSSF--DRSSQFSKAVNLISKIKGKCLVVGVGKSYLVGL 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSI 139
           K++STL+S GTPS    A +  HG LG I ++ D +++ S SG S EL +IL YA R ++
Sbjct: 60  KVSSTLSSLGTPSVAFSANDLQHGGLGAIQKNHDALLMFSVSGESSELNSILRYANRHNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I ++ ++ S++  ++ I + LPK  E+  H LAPT+S++   + GD+LAIA ++ + +
Sbjct: 120 PVIGVSCKSSSMLLRYSTIKILLPKVIEA-GHSLAPTSSSLNFFSWGDSLAIACMKRKKW 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + N F   HP G L T  +   ++M     IPL+     L  A+  +++K+ G V V ++
Sbjct: 179 TNNKFITTHPSGTLATALIQVKEIMAKKKEIPLISANQTLRAALAEMTKKKLGIVCVKEK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             K+  +IT+GDI RN + +L    +  V  KNP  I +      A++ +    I+ L+V
Sbjct: 239 NGKI-NLITDGDIRRNSN-NLYKKKILQVCSKNPTWISDTATALTAIEKINALKITSLLV 296

Query: 320 VDD------CQKAIGIVHFLDLLRFGI 340
             +       +K +G++H    L  GI
Sbjct: 297 AKNQDIKKKIKKIVGVLHLHHCLSRGI 323


>gi|218708281|ref|YP_002415902.1| putative D-arabinose 5-phosphate isomerase [Vibrio splendidus
           LGP32]
 gi|218321300|emb|CAV17250.1| putative D-arabinose 5-phosphate isomerase [Vibrio splendidus
           LGP32]
          Length = 310

 Score =  169 bits (428), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 117/317 (36%), Positives = 169/317 (53%), Gaps = 19/317 (5%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A   I  E  GL  +   L  E    F  AV  I   KGR +I G+GKSG IG K
Sbjct: 3   SPIDIAREVIQTEIEGLDYMAKRLGSE----FEVAVNAILNTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLRDNDNFV 118

Query: 142 IAITSENKSVVA----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           IAIT +  S +A    CH +I  ++PK  E+CP  LAPT+S    L +GDAL +AL++ R
Sbjct: 119 IAITGKESSTLASNSHCHLNI--SVPK--EACPLQLAPTSSTTATLVMGDALTVALMDVR 174

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   +F   HPGG LG  L     D M S D++P V         I  +S    G + +
Sbjct: 175 GFKPENFARFHPGGSLGRRLLSKVRDEMFS-DNLPSVCSDADFTSIIHKISSSHLG-LTL 232

Query: 257 VDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+   +   IIT+GD+ R      +D   L  +D+   NP  IL +  +  A +++    
Sbjct: 233 VNLNNETLAIITDGDLRRAMELKGRDAFDLVAKDIASINPASILPECNIQEAYEVMENKG 292

Query: 314 ISVLMVVDDCQKAIGIV 330
           I+ L+V ++    +GI+
Sbjct: 293 ITSLIVREN-NTVVGIL 308


>gi|217032119|ref|ZP_03437619.1| hypothetical protein HPB128_16g79 [Helicobacter pylori B128]
 gi|298735611|ref|YP_003728136.1| arabinose-5-phosphate isomerase [Helicobacter pylori B8]
 gi|216946267|gb|EEC24875.1| hypothetical protein HPB128_16g79 [Helicobacter pylori B128]
 gi|298354800|emb|CBI65672.1| arabinose-5-phosphate isomerase [Helicobacter pylori B8]
          Length = 329

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/279 (38%), Positives = 167/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLILPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K L+  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|307105754|gb|EFN54002.1| hypothetical protein CHLNCDRAFT_136008 [Chlorella variabilis]
          Length = 369

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/289 (34%), Positives = 157/289 (54%), Gaps = 30/289 (10%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG ++ITG+GKSG I  KL  TL STGT + F+   +A HGD+G+I R DL++  S SG+
Sbjct: 64  KGVIIITGVGKSGFIAQKLCQTLVSTGTKAVFLSPQDALHGDIGIIGRQDLLVCFSKSGA 123

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++EL  ++ +AR     L++ITS+  S +    D+ + LP E E CP  LAP TS  +Q+
Sbjct: 124 TEELIRLVPFARAKGARLVSITSQPGSELEAVCDLAVHLPLERELCPFDLAPVTSTAIQM 183

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDA 242
             GD  AIAL+++ + + + + + HP G++G  L +  +DVM S   +P+V     + + 
Sbjct: 184 VFGDTAAIALMQANHLTRDQYAMNHPAGRIGKRLILRVADVMISNGKVPVVPPSTLMPEV 243

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------------------------- 277
           +  L+ K  GCV V DE  +L GI T+GD+ R                            
Sbjct: 244 LVELTSKGCGCVLVADEELRLVGIFTDGDLRRTLQQASWGAAPAEGRGLALGSLQRAGCG 303

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDD 322
              +D+  L V++VM + PK    + +   AM ++ +   +++L VVDD
Sbjct: 304 AEGRDVMGLRVDEVMCEEPKTCGSEEMAVDAMHVMEEAPKVAMLPVVDD 352


>gi|87306459|ref|ZP_01088606.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
           3645]
 gi|87290638|gb|EAQ82525.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
           3645]
          Length = 363

 Score =  168 bits (425), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 166/318 (52%), Gaps = 18/318 (5%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R+II ++   ++  S++   L  +F  A++ +    G +++TG+GK+G IG K+A+T AS
Sbjct: 22  RTIIQQE---AAALSAIAERLDARFGQALDLVMQCPGDIIVTGMGKAGLIGQKIAATFAS 78

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTPS F+H AEA HGDLG +   D+++  S SG +DE+  ++   +     ++A+T+  
Sbjct: 79  TGTPSHFLHPAEAIHGDLGRVDEKDVVLAFSQSGETDEIVRLIPCLKSLGAQIVAVTANE 138

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            + +A  A IVL L    E+  + LAP+TS    LA+GDALA+     R F   DF   H
Sbjct: 139 NNTLARAAKIVLPLGPIVEAGANRLAPSTSTAAMLALGDALALTCSWRRGFRPEDFARYH 198

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI-------TILSEKRFGCVAVVDEGQ 261
           PGG LG       DVM      PL +      D +            +R G + +VDE  
Sbjct: 199 PGGSLGRKLALVEDVMR-----PLTECRISRYDQLVRDVFVSACRPGRRTGAIMLVDEQG 253

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GI T+ D+ R F      L    +  VM ++PK +     +  A+  + +  IS L 
Sbjct: 254 KLAGIFTDSDLARIFETGRTELLDQPISIVMTQSPKTVTSGVRVLEALSAIAKSKISELP 313

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V++D  + IG++   DL+
Sbjct: 314 VINDTGEPIGMLDITDLV 331


>gi|317014802|gb|ADU82238.1| arabinose-5-phosphate isomerase [Helicobacter pylori Gambia94/24]
          Length = 329

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 167/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGRKLFVKVKDLLQTTN-LPLIAPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L GI+++GD+ R   K L+  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNDNNELVGILSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|317013193|gb|ADU83801.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Lithuania75]
          Length = 329

 Score =  167 bits (422), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 161/279 (57%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLL 302
             +SEKR G   +V+E  +L G++++GD+ R   K L+  S V+      PK       L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGLDLKSEVKRFATLKPKSFKNLDAL 288

Query: 303 TVAMQLLRQ-HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +      + H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLECHKIQILVCVDDCNKVLGVLHLHQLLELGL 327


>gi|297183460|gb|ADI19591.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured SAR11 cluster bacterium HF0770_37D02]
          Length = 323

 Score =  166 bits (421), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 185/327 (56%), Gaps = 13/327 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +Q A +++  E + L  L +S  G  S QF  AV  +  +KG+ ++ G+GKS  +G 
Sbjct: 2   NKDIQIAKKTVQTEIQALKKLLASF-GR-SLQFSKAVNLLSKMKGKCLVVGVGKSYLVGL 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSI 139
           K+++TL+S G PS    A++  HG LG I ++ D+++V S SG S EL  IL YA R ++
Sbjct: 60  KVSATLSSLGIPSVAFSASDLQHGGLGTIQKNRDVLLVFSVSGESSELNNILRYANRHNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I ++ ++ S++  ++ I + LPK  E+  H LAPT+S++  L+ GD+LAIA ++ + +
Sbjct: 120 SVIGVSCKSASMLLRYSTIKILLPKVVEA-GHSLAPTSSSLNFLSWGDSLAIACMKRKKW 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++  F   HP G L T  +   ++M  G  IPL+     +  A+T +S+K+ G V V ++
Sbjct: 179 TDKKFITTHPSGVLATALIQVKEIMAKGKEIPLISSNKTMKTAVTEMSKKKLGVVCVKEK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              +  ++T+GDI R+ + +L    +++V  KNP  I E+     A++ +    I+ L+V
Sbjct: 239 NSIM--LLTDGDIRRHSN-NLYKKKLKNVATKNPAWISENATALSAIEKMNSLKITSLLV 295

Query: 320 VDD------CQKAIGIVHFLDLLRFGI 340
             +       +  +GI+H    L  GI
Sbjct: 296 SRNQNTKKRIKNVVGILHLHHCLSRGI 322


>gi|87120034|ref|ZP_01075930.1| arabinose-5-phosphate isomerase [Marinomonas sp. MED121]
 gi|86164736|gb|EAQ66005.1| arabinose-5-phosphate isomerase [Marinomonas sp. MED121]
          Length = 310

 Score =  166 bits (421), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/317 (36%), Positives = 165/317 (52%), Gaps = 19/317 (5%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S++  A   I  E  GL  +   L  E    F  A+  I   KGR +I G+GKSG IG K
Sbjct: 3   SSIDIAREVIQTEIDGLDYMAKRLGSE----FEMAINAIINTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDIFIAISNSGETDEVLKLLPFLRDNDNFV 118

Query: 142 IAITSENKSVVA----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           IAIT +  S +A    CH DI   +PK  E+CP  LAPT+S    L +GDALA+AL++ R
Sbjct: 119 IAITGKENSTLASNSHCHLDIA--VPK--EACPLQLAPTSSTTATLVMGDALAVALMDVR 174

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   +F   HPGG LG  L     D M S D++P V         I  +S    G   V
Sbjct: 175 GFKPENFARFHPGGNLGRRLLSKVRDEMFS-DNLPSVSSDADFTSIIHKISSSHLGLTLV 233

Query: 257 VDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                 L  IIT+GD+ R      ++   L  +D+   +P  I  +  +  A +++    
Sbjct: 234 NFNDDSL-AIITDGDLRRAMEAKGRNAFDLVAKDIASIHPASIFPEVSIEEAYEVMESKC 292

Query: 314 ISVLMVVDDCQKAIGIV 330
           I+ L +V +    IGI+
Sbjct: 293 ITSL-IVQENNSVIGIL 308


>gi|168701145|ref|ZP_02733422.1| hypothetical protein GobsU_16589 [Gemmata obscuriglobus UQM 2246]
          Length = 344

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/314 (33%), Positives = 163/314 (51%), Gaps = 16/314 (5%)

Query: 35  KRGLSSLESSLQ---GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           +R L +  +SL    G L   F+   + + A +GRV + G+GKS  IG K   TL STGT
Sbjct: 12  RRVLRAEAASLDVVAGRLDDGFNRVADVLLACRGRVAVIGVGKSADIGQKTVGTLNSTGT 71

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            ++ + A  A HGDLG +  DD+ ++LS SG S+EL  ++   ++ +  ++AIT    S 
Sbjct: 72  RAYTLDATRAVHGDLGSVHPDDVALLLSHSGESEELIRLIAPLKKLAAGVLAITGSAAST 131

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A   D  +      E+CP  LAP++S  + LA+GDALA  L+E R F+ ++F   HP G
Sbjct: 132 LARAVDAAVVYGPVIEACPLNLAPSSSTTVMLALGDALAFTLVEQRQFTADEFATFHPAG 191

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL------SEKRFGCVAVVDEGQKLKG 265
            LG      S+ M  GD + +     P  D +  +      + +R G + + D   +L G
Sbjct: 192 SLGRKLAVVSEWMRRGDELRV----APETDTVREVFAKVRHTGRRTGAIMLTDAAGRLSG 247

Query: 266 IITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + T+ D+ R F    + L    +  VM + P VI  +  +TVA+  L+    S L VVD 
Sbjct: 248 LFTDSDLARLFENREDRLLDSPIAAVMTRAPVVIGPEVRVTVALDALKARKFSELPVVDA 307

Query: 323 CQKAIGIVHFLDLL 336
             + IG++   DL+
Sbjct: 308 DGRPIGMLDITDLI 321


>gi|332674193|gb|AEE71010.1| possible arabinose-5-phosphate isomerase [Helicobacter pylori 83]
          Length = 327

 Score =  166 bits (420), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/279 (38%), Positives = 166/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 48  GKLVIVGVGKSALVAQKIAASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 108 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 168 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 227 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDAL 286

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 287 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|108563779|ref|YP_628095.1| polysialic acid capsule expression protein [Helicobacter pylori
           HPAG1]
 gi|107837552|gb|ABF85421.1| polysialic acid capsule expression protein [Helicobacter pylori
           HPAG1]
          Length = 329

 Score =  166 bits (420), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKITASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|320101686|ref|YP_004177277.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
 gi|319748968|gb|ADV60728.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
          Length = 381

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 150/275 (54%), Gaps = 5/275 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V + G+GKSG +G KLA+TLASTGT +F +H AEA HGDLG +   D+ ++LS SG ++E
Sbjct: 76  VFVLGVGKSGLVGEKLAATLASTGTRAFPLHPAEALHGDLGRVREGDVALLLSASGETEE 135

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  I+   +     L+AIT   +S +A  AD  + L    E+CP GLAP+ +    +A+G
Sbjct: 136 LLKIVPPLKALGAVLVAITCHERSALARKADERIILGPIEEACPLGLAPSATTTAMMAVG 195

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALA+ +   R F    F   HPGG LG       +VM SG  + + +      + +  L
Sbjct: 196 DALALLVSRCRGFDARGFVKFHPGGALGRKLTRVEEVMRSGPHVRIARESEITREVLVRL 255

Query: 247 --SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTL 301
             + +R G + +VD+   L GI T+ D+ R F +  + L    + + M + P +I     
Sbjct: 256 GGASRRAGAILIVDDRGVLTGIFTDSDLARLFERQRDYLLERPIVEAMTRAPSLIRAGRS 315

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  A+  L+   +S L V+D+  + IG++   DLL
Sbjct: 316 LAEALDALQARKLSELPVIDEAGRPIGLIDVTDLL 350


>gi|168042963|ref|XP_001773956.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674800|gb|EDQ61304.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 347

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG +  +G+GKSG +  K A TL STGT + F+   +A HGD+G++  +D++++ S SG+
Sbjct: 65  KGVIFFSGVGKSGFVAQKCAQTLVSTGTKAVFLSPTDALHGDIGLVGPNDVLVLFSKSGA 124

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++EL  ++  AR  S  L+ I+S   S      D+ + LP E E CP  LAP TS  +Q+
Sbjct: 125 TEELNKLIPCARAKSAYLVGISSLKHSNFRKMCDMHVYLPLERELCPFDLAPVTSTAIQM 184

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
              D +AIAL++++N +   + + HP G++G  L     D+M  GDS+PL +    ++D 
Sbjct: 185 LFCDTVAIALMKAKNLTREQYALNHPAGRIGRRLSFRVEDIMRKGDSLPLCRESDLIMDQ 244

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILED 299
           +  L+ K +GC+ V+D   +L G  T+GD+ R  +   +++  L V ++  + P+ I E+
Sbjct: 245 LVELTVKGYGCLIVIDASNRLLGTFTDGDLRRALNSSRENIFHLQVGEMCNREPRWIEEN 304

Query: 300 TLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +   AM+ + +    ++ L V+D  +  IG++   DL+  G+
Sbjct: 305 VMAIAAMKKMEEGASAVTFLPVLDYNKVVIGLITLHDLVSAGL 347


>gi|261838702|gb|ACX98468.1| polysialic acid capsule expression protein [Helicobacter pylori 51]
          Length = 329

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSVFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|317010203|gb|ADU80783.1| polysialic acid capsule expression protein [Helicobacter pylori
           India7]
          Length = 329

 Score =  166 bits (419), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L    E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKITKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDDC K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|188528192|ref|YP_001910879.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Shi470]
 gi|188144432|gb|ACD48849.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Shi470]
          Length = 329

 Score =  166 bits (419), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDRNKVLGVLHLHQLLELGL 327


>gi|317178132|dbj|BAJ55921.1| polysialic acid capsule expression protein [Helicobacter pylori
           F16]
          Length = 329

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/280 (38%), Positives = 165/280 (58%), Gaps = 4/280 (1%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G 
Sbjct: 49  RGKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGE 108

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + L
Sbjct: 109 SLELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTL 168

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           A+GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA
Sbjct: 169 ALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDA 227

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DT 300
           +  +SEKR G   +V+E  +L GI+++GDI R   K LN  S V+      PK     D 
Sbjct: 228 LIEMSEKRLGSAILVNEANELVGILSDGDIRRALLKGLNLESEVKYFATLKPKSFKNLDA 287

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           LL  A++ L  H I +L+ VDD  K +G++H   LL  G+
Sbjct: 288 LLLEALEFLEHHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|332799741|ref|YP_004461240.1| Arabinose-5-phosphate isomerase [Tepidanaerobacter sp. Re1]
 gi|332697476|gb|AEE91933.1| Arabinose-5-phosphate isomerase [Tepidanaerobacter sp. Re1]
          Length = 203

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/191 (45%), Positives = 127/191 (66%), Gaps = 4/191 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A + +  E + + S+ +++ GE    F  AV+ +   KGRVV++G+GKSGHIG KLA
Sbjct: 4   IETARQVMETELKAIKSVSTTI-GE---DFEAAVKAMYECKGRVVVSGLGKSGHIGKKLA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGTPSFFVHA EA HGDLGMIT+DD+++ +S SG + EL  ++   R     +I+
Sbjct: 60  ATLSSTGTPSFFVHATEALHGDLGMITKDDIVLAISNSGETKELLNMIPSVRIIGAKIIS 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  +DI + +  E E+ P  LAPT+S+   LA+GD++AI L   + F E +
Sbjct: 120 ITGSKESTLAKCSDINIEVKVENEADPLNLAPTSSSTATLAVGDSIAITLSVMKGFKEEN 179

Query: 204 FYVLHPGGKLG 214
           F V HPGG LG
Sbjct: 180 FAVFHPGGSLG 190


>gi|255582507|ref|XP_002532039.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
           communis]
 gi|223528309|gb|EEF30355.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
           communis]
          Length = 340

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 163/283 (57%), Gaps = 6/283 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G ++ TG+GKSG + +K++ TL S G  + F+   +A HGD+G++T  D++++ S SG+
Sbjct: 58  RGTILFTGVGKSGFVANKISQTLVSLGIRAGFLSPVDALHGDIGILTPRDILVMFSKSGN 117

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +DEL  ++  A+     L+++TS   + +A  +D+ + LP E E CP  LAP TS  +Q+
Sbjct: 118 TDELLRLVPCAKAKGAFLVSVTSVEGNALAMVSDMNVYLPLERELCPFDLAPVTSTAIQM 177

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
             GD +AIAL+ +RN S++++   HP G++G +L     DVM   D +P+ K G  ++D 
Sbjct: 178 VFGDTIAIALMGARNLSKDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQ 237

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILED 299
           +  L+ +  GC+ V+DE   L G  T+GD+ R      + +  L+V ++  +NP+ I  D
Sbjct: 238 LVELTSRGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPD 297

Query: 300 TLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +   AM+ +      +  L V+D     IGIV    L+  G+
Sbjct: 298 AMAVEAMKKMESPPSPVQFLPVIDQKNIVIGIVTLHGLVSAGL 340


>gi|116617911|ref|YP_818282.1| sugar phosphate isomerase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227432200|ref|ZP_03914197.1| possible arabinose-5-phosphate isomerase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|116096758|gb|ABJ61909.1| Sugar phosphate isomerase with CBS domains [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|227352044|gb|EEJ42273.1| possible arabinose-5-phosphate isomerase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 320

 Score =  165 bits (417), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/322 (34%), Positives = 174/322 (54%), Gaps = 18/322 (5%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A ++   E   L+ ++SSL       F  AV+KI + KGRV+  GIGKSG I  K+A+
Sbjct: 8   EDAKKTFDVEIEALTRVKSSLGK----SFDEAVDKILSTKGRVIFIGIGKSGIIADKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE-LKAI--LYYARRFSIPL 141
           + +S G  SF++ A  A HGDLG ++ DD++I +S SG + E L+A+  L       +  
Sbjct: 64  SFSSVGLASFYIDAGTAYHGDLGRVSSDDVVIFISNSGETQEVLQALSALQNIHNNELAT 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A + DIVL++    E+    LAPT+S    L +GDAL +A+  ++ F  
Sbjct: 124 IAMTGSEDSTLAKNTDIVLSIDVAEEADITKLAPTSSTTATLVMGDALLVAIETAKEFDR 183

Query: 202 NDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             F + HPGG +G + +    + MH+   IP V +   + + I  +S+   G   V DE 
Sbjct: 184 ESFAMYHPGGSIGKILLQNVKNSMHT--KIPYVHVDTSINEVIYRISDYGIGITLVKDEQ 241

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSV-----EDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           + + GIIT+GDI + F   LN   V     +D M +    I ED     A + +  +NIS
Sbjct: 242 ENVIGIITDGDIRKKF---LNISKVKGSTAKDYMTQGFISISEDKRNREAWRKMANYNIS 298

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L+V+D  +K +G+V   D+L 
Sbjct: 299 NLVVLDKDKKVVGVVTIHDVLE 320


>gi|330813573|ref|YP_004357812.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486668|gb|AEA81073.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 323

 Score =  164 bits (416), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/325 (34%), Positives = 175/325 (53%), Gaps = 9/325 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +  A + I  E  GL  L  S+       F  AV  I   KGR+V  G+GKS  
Sbjct: 1   MNKKNIINIANKVISTEIEGLKKLSKSIN----ISFAQAVNTINNSKGRIVCCGVGKSAK 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K++STL+S G  SF +   +A HG LG I   D++I+ S+SG+S EL +IL YA++ 
Sbjct: 57  ILEKISSTLSSIGIASFTLDPTDAGHGSLGAICGGDVLIIASFSGNSSELNSILDYAKKN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPH--GLAPTTSAIMQLAIGDALAIALLE 195
            I +I I+S  KS +   +++ + +PK  E+      + PT+S+I  LA+GD +AIAL  
Sbjct: 117 KIKIIGISSNLKSNLIKLSNVKILIPKVAEAGNKHLNMIPTSSSINLLALGDCMAIALAT 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
              F + +F  LHP G +G      S +M +  SIP V     L   +  +S  R G V 
Sbjct: 177 KNKFDKKEFGKLHPSGSIGKNLSDISQIMIARKSIPFVHEDSSLQKTVIKISSGRLGGVV 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V ++ +++ G I++GDI R   K  N      +D+M K P  I    ++T A+ ++ +  
Sbjct: 237 VTNKRKQVCGFISDGDINRAIKKFKNIFLKKSKDIMTKKPTYISNTCMVTEALAIMNRKK 296

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I++L+V  + +K  G+VH  D+L F
Sbjct: 297 ITILLVAKN-KKLYGLVHMHDILSF 320


>gi|217034558|ref|ZP_03439967.1| hypothetical protein HP9810_874g15 [Helicobacter pylori 98-10]
 gi|216942978|gb|EEC22461.1| hypothetical protein HP9810_874g15 [Helicobacter pylori 98-10]
          Length = 329

 Score =  164 bits (416), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|116074469|ref|ZP_01471731.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9916]
 gi|116069774|gb|EAU75526.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9916]
          Length = 328

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/307 (34%), Positives = 169/307 (55%), Gaps = 17/307 (5%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++G L+    CA  K K     +VITG+GKSG +  K+A+T +S G  + +++  +A HG
Sbjct: 27  VEGALALLERCADRKAK-----LVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHG 81

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++  DD+ ++LS SG + EL  +L + +R     IA+    +S +A  +D+VL    
Sbjct: 82  DLGVVAPDDVCLLLSNSGETSELLEVLPHLKRRGTARIALVGRAESSLALGSDVVLEASV 141

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L +  +D+
Sbjct: 142 DREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFAINHPAGSLGKQLTMTVADL 201

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLN 281
           M     +P ++   PL D I+ L++   G   V D     +L G+IT+GD+ R   +D N
Sbjct: 202 MVPAQQLPALRPETPLPDVISQLTQGAIGSGWVEDPEHAGRLVGLITDGDLRRAL-RDQN 260

Query: 282 -----TLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFL 333
                +L  +D+M  +P  +  + +   A+Q +   R+  ISVL VV+   +  G++   
Sbjct: 261 PEGWASLQAKDLMTADPITVTAELMAVDAIQRMEHNRRKPISVLPVVNAAGELDGLLRLH 320

Query: 334 DLLRFGI 340
           DL++ G+
Sbjct: 321 DLVQAGL 327


>gi|182412453|ref|YP_001817519.1| KpsF/GutQ family protein [Opitutus terrae PB90-1]
 gi|177839667|gb|ACB73919.1| KpsF/GutQ family protein [Opitutus terrae PB90-1]
          Length = 328

 Score =  164 bits (415), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/290 (36%), Positives = 158/290 (54%), Gaps = 3/290 (1%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AV    A   +++ TG+GK+ H+  KL  T  STG  + F+ A +A HGDLG+    DL
Sbjct: 39  AAVRATIAAGRKLIFTGVGKNAHVAQKLTGTFNSTGVTATFLDATQALHGDLGLCAEGDL 98

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            ++LS SG ++E+  +L   +R  + L+A T    S +A + D  L      E+CP  LA
Sbjct: 99  ALLLSNSGQTEEILRLLPVLKRQGVTLVAFTQHADSDLAKNCDHRLLYRVPREACPLSLA 158

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           PT S    LA+GDALA+ LLE R  + +DF  LHP G LG L + A D+M + D +P+ +
Sbjct: 159 PTASTTAALALGDALAMVLLEERGVTRDDFARLHPAGNLGALLLKARDIMRTADRLPVAR 218

Query: 235 IGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIK 291
                 DAI  ++  R G +A+V  +  KL GI+T+GD  R      D     V   M +
Sbjct: 219 ETVSTQDAILAMTRARAGSIALVHPKSGKLTGILTDGDFRRAALTGPDFLQKPVATFMTR 278

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           NPKVI E+ L   A++L   + I  L+V++   + +G++   DL +  I+
Sbjct: 279 NPKVIAENALGVDALRLFEAYKIDDLIVINAQYRPVGLIDGQDLPKLKIV 328


>gi|317179604|dbj|BAJ57392.1| polysialic acid capsule expression protein [Helicobacter pylori
           F30]
          Length = 329

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|315585813|gb|ADU40194.1| arabinose-5-phosphate isomerase [Helicobacter pylori 35A]
          Length = 327

 Score =  164 bits (414), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 48  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 108 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 168 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 227 IEMSEKRLGSAILVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDAL 286

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 287 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|317181109|dbj|BAJ58895.1| polysialic acid capsule expression protein [Helicobacter pylori
           F32]
          Length = 329

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKIVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNDNNELVGILSDGDVRRALLKGLNLESEVKRFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|226940938|ref|YP_002796012.1| Sugar isomerase, KpsF/GutQ family [Laribacter hongkongensis HLHK9]
 gi|226715865|gb|ACO75003.1| Sugar isomerase, KpsF/GutQ family [Laribacter hongkongensis HLHK9]
          Length = 259

 Score =  163 bits (413), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 93/171 (54%), Positives = 117/171 (68%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           SL   L   F  AV+ + A  GRVV+TG+GKSGH+  K+A+TLASTGTP+FFVH AEA+H
Sbjct: 34  SLSSRLDETFLAAVDAMLATTGRVVVTGMGKSGHVARKIAATLASTGTPAFFVHPAEAAH 93

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI   D+++ LS SG SDE+ A+L   RR  + LIA+T    S +A  ADI L   
Sbjct: 94  GDLGMILSGDVVLALSNSGESDEVIALLPAMRRKQVTLIAMTGRTGSTLAREADIHLDAA 153

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            E E+CP GLAPT+S    LA+GDALA+ LL++RNF   DF + HP G LG
Sbjct: 154 VEREACPLGLAPTSSTTAALALGDALAVTLLDARNFRAEDFAMSHPAGSLG 204


>gi|281358384|ref|ZP_06244866.1| KpsF/GutQ family protein [Victivallis vadensis ATCC BAA-548]
 gi|281315211|gb|EFA99242.1| KpsF/GutQ family protein [Victivallis vadensis ATCC BAA-548]
          Length = 325

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/294 (36%), Positives = 168/294 (57%), Gaps = 4/294 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + ++ A      E  GL ++  +L G         +E +   +G+++ TGIGKSG+I
Sbjct: 1   MTKTVLERAREVFDTEIEGLQAVRDNLNGSFEELVARCMETLSN-EGKLIFTGIGKSGYI 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+S G+PS F+H  EA HGDLGMI + DL+I LS+SG ++EL  +L  A+R  
Sbjct: 60  GKKIAATLSSVGSPSVFMHPVEARHGDLGMIQKHDLLIALSYSGETEELLVVLNPAKRLG 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L AIT+   S +   +D+V+ +P   E+CP  LAPTT+    LA+GDALA+ LL+ + 
Sbjct: 120 VQLAAITASAGSTLGRMSDLVVEMPVPQEACPFNLAPTTTTTALLALGDALAMVLLDRQG 179

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+++D+  LHPGG +G +    A D+M   +   +V     + DA+  +S  R G   VV
Sbjct: 180 FTKSDYGRLHPGGAIGRMVTLRAMDIMRDLEHTAIVPPEAKVRDALYRMSHARCGSAIVV 239

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLL 309
               +L GI T+GD  R   KD++ L   + +VM   P  +  + L    ++ L
Sbjct: 240 APDNRLLGIFTDGDFRRWCEKDMSVLERLMSEVMTPKPVTVKAEQLAVEVLKTL 293


>gi|254779940|ref|YP_003058047.1| putative phosphosugar isomerase [Helicobacter pylori B38]
 gi|254001853|emb|CAX30103.1| Putative phosphosugar isomerase [Helicobacter pylori B38]
          Length = 327

 Score =  163 bits (412), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 106/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 48  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 108 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 168 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLILPSTSFKDAL 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K L+  S V       PK     D L
Sbjct: 227 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGLSLESEVRHFATLKPKSFKNLDAL 286

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 287 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|317182631|dbj|BAJ60415.1| polysialic acid capsule expression protein [Helicobacter pylori
           F57]
          Length = 327

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 48  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 108 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 168 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 226

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 227 IEMSEKRLGSAILVNDNNELVGILSDGDVRRALLKGLNLESEVKRFATLKPKSFKNLDAL 286

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 287 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|322379599|ref|ZP_08053936.1| KpsF-like protein [Helicobacter suis HS1]
 gi|321147993|gb|EFX42556.1| KpsF-like protein [Helicobacter suis HS1]
          Length = 319

 Score =  162 bits (411), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 165/278 (59%), Gaps = 8/278 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           VVI G+GKS HIG K+A+TL STGT + F+H  E+ HGD+G++   D+I+ +S+ G S E
Sbjct: 43  VVIMGVGKSAHIGRKIAATLTSTGTKAIFLHPTESLHGDMGIVGPRDVILAISYGGESME 102

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L   +  +  LIA+T +N + ++  A  ++ L    E+   G+ P+TS  + LA+G
Sbjct: 103 LLEALGSLKPKT--LIAMTKDNNNSLSKLATYLIPLKLTQEAISFGV-PSTSTTLSLALG 159

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           D LA  L+E +NFS  DF  LHPGG LG  L +   D++ +  ++PLV     L  A+  
Sbjct: 160 DVLAACLMEVKNFSREDFAKLHPGGLLGKKLRLRVRDILLT-KNLPLVDQEACLHAALVE 218

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILE-DTLL 302
            ++K  G   +VD+ Q+L GI+++GDI R   +    +T   ++    NPK I   D L+
Sbjct: 219 ANDKCLGNALLVDDQQRLIGILSDGDIRRALLQSEFDSTAPAKNFATLNPKTISNLDMLV 278

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             A++L+  + IS+L+V D+ +K +G++H   LL  G+
Sbjct: 279 VEALELIETYKISLLVVCDNQKKVLGVLHLHTLLALGL 316


>gi|261840102|gb|ACX99867.1| hypothetical protein HPKB_1326 [Helicobacter pylori 52]
          Length = 329

 Score =  162 bits (410), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L GI+++GD+ R   K LN  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNDNNELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|294460481|gb|ADE75818.1| unknown [Picea sitchensis]
          Length = 342

 Score =  162 bits (410), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 162/295 (54%), Gaps = 6/295 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q     + + A KG +  TG+GKSG +  K+  T  STGT + F+   +A HGD+G++  
Sbjct: 48  QLQAFTQVLMAAKGVIFFTGVGKSGFVAQKITQTFVSTGTKAVFLSPTDALHGDIGIVGP 107

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D++++ S SG+++EL  ++  AR     ++A+TS   S ++   D+ + LP + E CP 
Sbjct: 108 NDVLVLFSKSGTTEELLRLVPCARAKGAYMVAVTSLRNSQLSNVCDMHVYLPLDRELCPF 167

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSI 230
            LAP TS  +Q+  GD +AIAL++++  +   + + HP G++G  L     DVM   D +
Sbjct: 168 DLAPVTSTAIQMLFGDTVAIALMQAKKLTREQYALNHPAGRIGKRLIFRVQDVMKRHDEL 227

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVED 287
           PL K    ++D +  L+ K  GC+ VVDE   L G  T+GD+ R   +  + +  L+V +
Sbjct: 228 PLCKENDLIMDQLMELTSKGCGCLLVVDEECHLIGTFTDGDLRRALKSIREGVFKLTVGE 287

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  +NP+ I  D +   AMQ +      +  L +V++    IGIV    L+  G+
Sbjct: 288 MCNRNPRTIGPDAMAIEAMQKMESPPSPVQFLPIVNNDNVVIGIVTLHGLVSAGL 342


>gi|307638088|gb|ADN80538.1| Polysialic acid capsule expression protein [Helicobacter pylori
           908]
 gi|325996689|gb|ADZ52094.1| Polysialic acid capsule expression protein [Helicobacter pylori
           2018]
 gi|325998281|gb|ADZ50489.1| hypothetical protein hp2017_1370 [Helicobacter pylori 2017]
          Length = 329

 Score =  162 bits (409), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 166/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L G++++GD+ R   K L+  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNKANELVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDRNKVLGVLHLHQLLELGL 327


>gi|308183522|ref|YP_003927649.1| hypothetical protein HPPC_06955 [Helicobacter pylori PeCan4]
 gi|308065707|gb|ADO07599.1| hypothetical protein HPPC_06955 [Helicobacter pylori PeCan4]
          Length = 329

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K L+  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|322434744|ref|YP_004216956.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX9]
 gi|321162471|gb|ADW68176.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX9]
          Length = 324

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 155/279 (55%), Gaps = 6/279 (2%)

Query: 45  LQGELSFQFHCAV---EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
           L GE+      A+   E   A   RV+ TGIGKSG I  K+A+TL STGT + ++H AEA
Sbjct: 24  LDGEMGVAVERALGLLEGCAAGGRRVICTGIGKSGIIARKIAATLCSTGTAAAYLHPAEA 83

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGM  + D+++ LS+SG ++E+  +L    R  + +++    + S +A  + +VL 
Sbjct: 84  LHGDLGMAAKGDVVVALSYSGETEEVLRLLPAFERLGVGVVSFCGCSSSTLARGSAVVLD 143

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           +    E+C   LAPT S  + LA+GDALA+ L   R F+  DF  LHPGG+LG       
Sbjct: 144 VSVSEEACSLNLAPTASTTVMLALGDALALELSRRRGFAAVDFAGLHPGGRLGRRLARVR 203

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
           ++MHSG+++P V +   + + I  +S KR G   V+  G  L GI+++GD+ R   K   
Sbjct: 204 ELMHSGEALPTVSVETSMPEMIHEMSRKRLGMTVVLGAGGGLAGIVSDGDLRRLLEKAGA 263

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +    +  +VM  +P  I    +   A+ L+ +  I+ L
Sbjct: 264 ESFGKTAGEVMNGSPVTIPSGMMAADALVLMEERKITAL 302


>gi|87123156|ref|ZP_01079007.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9917]
 gi|86168876|gb|EAQ70132.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9917]
          Length = 328

 Score =  161 bits (408), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 165/306 (53%), Gaps = 15/306 (4%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++G L+    CA  K K     +VITG+GKSG +  K+A+T +S G  + +++  +A HG
Sbjct: 27  VEGALALLERCADRKAK-----LVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHG 81

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++  DD+ ++LS SG + EL  +L + +R     IA+    +S +A  +D+VL    
Sbjct: 82  DLGVVAPDDVCLLLSNSGETSELLEVLPHLKRRGTARIALVGRAESSLARGSDVVLEASV 141

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L +  +D+
Sbjct: 142 DREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTMTVADL 201

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH---- 277
           M     +  ++   PL + I  L++   G   V D  Q  +L G+IT+GD+ R       
Sbjct: 202 MVPAAQLAPLRPTTPLPEVIGRLTQGAIGSGWVEDPQQAGRLIGLITDGDLRRALRNHGS 261

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLD 334
           +   +L+  D+M  +P  +  D L   A+Q +   R+  I VL VVD   +  G++   D
Sbjct: 262 ERWASLTAADLMTADPITVAADLLAVEALQRMEHNRRKPIGVLPVVDTSDRLQGLLRLHD 321

Query: 335 LLRFGI 340
           L++ G+
Sbjct: 322 LVQAGL 327


>gi|322380210|ref|ZP_08054441.1| polysialic acid capsule expression protein KpsF [Helicobacter suis
           HS5]
 gi|321147376|gb|EFX42045.1| polysialic acid capsule expression protein KpsF [Helicobacter suis
           HS5]
          Length = 319

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/278 (37%), Positives = 164/278 (58%), Gaps = 8/278 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           VVI G+GKS HIG K+A+TL STGT + F+H  E+ HGD+G++   D+I+ +S+ G S E
Sbjct: 43  VVIMGVGKSAHIGRKIAATLTSTGTKAIFLHPTESLHGDMGIVGPRDVILAISYGGESME 102

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L   +  +  LIA+T +N + ++  A  ++ L    E+   G+ P+TS  + LA+G
Sbjct: 103 LLEALGSLKPKT--LIAMTKDNNNSLSKLATYLIPLKLTQEAISFGV-PSTSTTLSLALG 159

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           D LA  L+E +NFS  DF  LHPGG LG  L +   D++ +  ++PLV     L  A+  
Sbjct: 160 DVLAACLMEVKNFSREDFAKLHPGGLLGKKLRLRVRDILLT-KNLPLVDQEACLHAALVE 218

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILE-DTLL 302
            ++K  G   +VD+ Q+L GI+++GDI R   +    +T   ++    NPK I   D L+
Sbjct: 219 ANDKCLGNALLVDDQQRLIGILSDGDIRRALLQSEFDSTAPAKNFATLNPKTISNLDMLV 278

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             A++L+  + IS+L+V  D +K +G++H   LL  G+
Sbjct: 279 VEALELIETYKISLLVVCGDQKKVLGVLHLHTLLALGL 316


>gi|145631470|ref|ZP_01787239.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
 gi|144982900|gb|EDJ90413.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
          Length = 228

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 137/225 (60%), Gaps = 9/225 (4%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ 
Sbjct: 6   DIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNN 65

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIP 231
           LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C   D M +   +P
Sbjct: 66  LAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQT--RLP 123

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVED 287
            +       D +T+++E R G VA+V E ++LKGIIT+GDI R    N  + LN  + +D
Sbjct: 124 TILPNTNFTDCLTVMNEGRMG-VALVMENEQLKGIITDGDIRRALTANGAETLNK-TAKD 181

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 182 FMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 226


>gi|41632|emb|CAA35745.1| unnamed protein product [Escherichia coli K-12]
          Length = 223

 Score =  161 bits (407), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/214 (43%), Positives = 128/214 (59%), Gaps = 12/214 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 8   SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 67

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +
Sbjct: 68  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDI 127

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCAS 221
             E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L     
Sbjct: 128 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVH 187

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            +M   D+IP V +           + +R GC A
Sbjct: 188 HLMRRDDAIPQVAV-----------NRQRDGCDA 210


>gi|207091905|ref|ZP_03239692.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 329

 Score =  161 bits (407), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINSAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLILPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNETNELVGVLSDGDVRRALLKGVSLESEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQILVCVDDHNKVLGVLHLHQLLELGL 327


>gi|153217455|ref|ZP_01951185.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113544|gb|EAY32364.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 236

 Score =  160 bits (406), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 93/237 (39%), Positives = 144/237 (60%), Gaps = 4/237 (1%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI R D+++ +S SG S E+ A+L   +R SI +I++T    S +A  ADI L +    E
Sbjct: 1   MIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMTGNPNSNMAKLADIHLQITVPRE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S    L +GDALA+AL+++R F+  DF + HPGG LG  L +  +D+MHS
Sbjct: 61  ACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHS 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G ++P V     + DA+  +S+K  G  AVVDE   L GI T+GD+ R   K  D++T +
Sbjct: 121 GKALPKVAPQALIRDALLEISQKGLGMTAVVDEDDTLLGIFTDGDLRRILDKRIDIHTTA 180

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + DVM + P V   + L    + L++   I+ LM+V++  K +G ++  DLL+ G++
Sbjct: 181 IADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLVEN-NKLVGALNMHDLLKAGVM 236


>gi|308185187|ref|YP_003929320.1| hypothetical protein HPSJM_07235 [Helicobacter pylori SJM180]
 gi|308061107|gb|ADO03003.1| hypothetical protein HPSJM_07235 [Helicobacter pylori SJM180]
          Length = 329

 Score =  160 bits (405), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 101/279 (36%), Positives = 160/279 (57%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLL 302
             +SEKR G   +V++  +L G++++GD+ R   K L+  S V       PK       L
Sbjct: 229 IEMSEKRLGSAILVNDNNELVGVLSDGDVRRALLKGLSLESEVRHFATLKPKSFKNLDAL 288

Query: 303 TVAMQLLRQ-HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +      + H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLECHKIQLLVCVDDRNKVLGVLHLHQLLELGL 327


>gi|15646038|ref|NP_208220.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori 26695]
 gi|7388494|sp|O25971|Y1429_HELPY RecName: Full=Uncharacterized protein HP_1429
 gi|2314601|gb|AAD08468.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori 26695]
          Length = 329

 Score =  160 bits (404), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 164/279 (58%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVVLMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+E  +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|109946740|ref|YP_663968.1| hypothetical protein Hac_0115 [Helicobacter acinonychis str.
           Sheeba]
 gi|109713961|emb|CAJ98969.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 329

 Score =  160 bits (404), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 164/279 (58%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+++++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKISASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + ESCP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKESCPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIPPNTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+   +L G++++GD+ R   K ++  S V D     PK     D L
Sbjct: 229 IEMSEKRLGSAILVNANNELVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VD   K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDSHNKVLGVLHLHQLLELGL 327


>gi|116071595|ref|ZP_01468863.1| KpsF/GutQ [Synechococcus sp. BL107]
 gi|116065218|gb|EAU70976.1| KpsF/GutQ [Synechococcus sp. BL107]
          Length = 328

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 167/308 (54%), Gaps = 13/308 (4%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           SS Q E + Q    +E+    K ++VITG+GKSG +  K+A+T +S G  + +++  +A 
Sbjct: 23  SSDQVEAAIQL---LERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAL 79

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLG++  +D+ ++LS SG + EL  +L + +R     IAI    +S +   +D+VL  
Sbjct: 80  HGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRRGTGRIAIVGRAESSLGRGSDVVLEA 139

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L + A+
Sbjct: 140 SVDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTMTAA 199

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-- 277
           D+M     +  ++    L D I  L+    G   V D      L GI+T+GD+ R     
Sbjct: 200 DLMVPASKLHPLQPDTSLPDVIGGLTRDGIGSGWVEDPNSPGSLLGILTDGDLRRALQDH 259

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHF 332
              + +TL   D+M  +P  +  D L+  A++ +   R+  ISVL VV D ++ IG++  
Sbjct: 260 SANNWSTLQAADLMTADPITVRSDVLVVKALEQMENNRRKPISVLPVVGDNKQLIGLLRL 319

Query: 333 LDLLRFGI 340
            DL++ G+
Sbjct: 320 HDLVQAGL 327


>gi|15612389|ref|NP_224042.1| hypothetical protein jhp1324 [Helicobacter pylori J99]
 gi|7388502|sp|Q9ZJI5|YE29_HELPJ RecName: Full=Uncharacterized protein jhp_1324
 gi|4155933|gb|AAD06900.1| putative [Helicobacter pylori J99]
          Length = 329

 Score =  159 bits (403), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 165/279 (59%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKIVASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIAPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V++  +L G++++GD+ R   K L+  S V+      PK     D L
Sbjct: 229 IEMSEKRLGSAILVNDNNELVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDDRNKVLGVLHLHQLLELGL 327


>gi|289803127|ref|ZP_06533756.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 192

 Score =  159 bits (403), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 82/171 (47%), Positives = 113/171 (66%), Gaps = 4/171 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
             AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 139 RAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189


>gi|208435297|ref|YP_002266963.1| polysialicacid capsule expression protein [Helicobacter pylori G27]
 gi|208433226|gb|ACI28097.1| polysialicacid capsule expression protein [Helicobacter pylori G27]
          Length = 277

 Score =  159 bits (402), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/276 (37%), Positives = 164/276 (59%), Gaps = 4/276 (1%)

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           +I G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL
Sbjct: 1   MIVGVGKSALVAQKIAASMLSTGNRSTFLHPTEAMHGDLGMVEKNDVILMISYGGESLEL 60

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD
Sbjct: 61  LNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGD 120

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           AL   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+  +
Sbjct: 121 ALMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLILPSTSFKDALIEM 179

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTLLTV 304
           SEKR G   +V+E  +L G++++GD+ R   K ++  S V+      PK     D LL  
Sbjct: 180 SEKRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVKHFATLKPKSFKNLDALLLE 239

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 240 ALEFLERHKIQILVCVDDHNKVLGVLHLHQLLELGL 275


>gi|241895148|ref|ZP_04782444.1| possible arabinose-5-phosphate isomerase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871644|gb|EER75395.1| possible arabinose-5-phosphate isomerase [Weissella
           paramesenteroides ATCC 33313]
          Length = 320

 Score =  159 bits (402), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 105/305 (34%), Positives = 165/305 (54%), Gaps = 10/305 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++LE  ++ EL   F   VE+I    GR++   IGKSG I  K+A++ +S G  SFF+ 
Sbjct: 18  ITALEK-VRDELDESFDQVVEEILDTTGRLIFIAIGKSGIIAEKIAASFSSIGVSSFFID 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENKSVVAC 154
           A  A HGDLG ++ DDL+  +S SG + E+    +  ++     +  +A+T  + S +A 
Sbjct: 77  AGNAFHGDLGRVSADDLVFFVSNSGETQEVIQTFFALKQIFGDDLKTVALTGASDSTLAQ 136

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ++   L +    E+    LAPT+S    L +GDAL IA+ + + F+ +DF + HPGG +G
Sbjct: 137 NSTYPLIVDVAVEADTTKLAPTSSTTATLVVGDALLIAVQKEKEFTRDDFALYHPGGSIG 196

Query: 215 TLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            L +    +VMH+   IP V I  P+ D I  +S+   G   V DE  K  GI+T+GDI 
Sbjct: 197 KLLLQTVKNVMHT--KIPYVNINTPINDVIYRISDFGVGMTLVKDEDGKAVGIVTDGDIR 254

Query: 274 RNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   +   +   +  D M K    I  D   +VA + +  HNIS L+V DD +  +GI+ 
Sbjct: 255 KKMLQVSMVKKSTAADYMTKGFISIDVDKRNSVAWKKMASHNISNLVVEDDGE-VVGIIT 313

Query: 332 FLDLL 336
             D+L
Sbjct: 314 IHDVL 318


>gi|88808099|ref|ZP_01123610.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 7805]
 gi|88788138|gb|EAR19294.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 7805]
          Length = 347

 Score =  159 bits (401), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 164/306 (53%), Gaps = 15/306 (4%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++G L+    CA  K K     +VITG+GKSG +  K+A+T +S G  + +++  +A HG
Sbjct: 46  VEGALALLERCADRKAK-----LVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHG 100

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++  DD+ ++LS SG + EL  +L + +R     IA+     S +A  +D+VL    
Sbjct: 101 DLGVVAPDDVCLLLSNSGETAELLEVLPHLKRRGTARIALVGRADSSLARGSDVVLDASV 160

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L +  +D+
Sbjct: 161 DREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISSADFALNHPAGALGKQLTMTVADL 220

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH---- 277
           M     +P +    PL D I  L++   G   V D  Q  +L G+IT+GD+ R       
Sbjct: 221 MIPVAQLPSITPTTPLPDVIGRLTQGAIGSGWVEDPAQPGRLLGLITDGDLRRALRDHGP 280

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLD 334
           +    L+  ++M  +P  +  D L   A+Q +   R+  ISVL VVD+     G++   D
Sbjct: 281 ERWPALTAGELMTADPITVSADILAVEAIQRMEHNRRKPISVLPVVDEHDGLHGLLRLHD 340

Query: 335 LLRFGI 340
           L++ G+
Sbjct: 341 LVQAGL 346


>gi|210135590|ref|YP_002302029.1| polysialic acid capsule expression protein [Helicobacter pylori
           P12]
 gi|210133558|gb|ACJ08549.1| polysialic acid capsule expression protein [Helicobacter pylori
           P12]
          Length = 329

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 163/279 (58%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKITASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLILPSTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+   +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNGANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQILVCVDDYNKVLGVLHLHQLLELGL 327


>gi|166154610|ref|YP_001654728.1| carbohydrate isomerase [Chlamydia trachomatis 434/Bu]
 gi|301335877|ref|ZP_07224121.1| carbohydrate isomerase [Chlamydia trachomatis L2tet1]
 gi|165930598|emb|CAP04095.1| carbohydrate isomerase [Chlamydia trachomatis 434/Bu]
          Length = 328

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/302 (33%), Positives = 167/302 (55%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  SFHYDCVHQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  
Sbjct: 87  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++
Sbjct: 147 ELDPFDLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLY 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++ ILS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 207 PRTEVPFCSPLTTVAESLPILSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M +NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 267 YPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|115444351|ref|NP_001045955.1| Os02g0158300 [Oryza sativa Japonica Group]
 gi|50251251|dbj|BAD28031.1| putative polysialic acid capsule expression protein [Oryza sativa
           Japonica Group]
 gi|50252181|dbj|BAD28176.1| putative polysialic acid capsule expression protein [Oryza sativa
           Japonica Group]
 gi|113535486|dbj|BAF07869.1| Os02g0158300 [Oryza sativa Japonica Group]
 gi|125538157|gb|EAY84552.1| hypothetical protein OsI_05923 [Oryza sativa Indica Group]
          Length = 344

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 156/286 (54%), Gaps = 10/286 (3%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G V  TG+GKSG +  KLA TLAS G T + F+   +A HGD+G +   DL+++LS SG+
Sbjct: 59  GAVFFTGVGKSGIVARKLAQTLASLGFTRAGFLSPVDALHGDIGSVFPGDLLVLLSKSGA 118

Query: 124 SDELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SDEL A+   AR     LI++TS        +A   D+ + LP + E CP GLAP TS  
Sbjct: 119 SDELLALAPCARAKGAHLISLTSAASGADCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTA 178

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPL 239
           +Q+  GD +  A++E+R  S + +   HP GK+G +L     DVM   + +PL K G  +
Sbjct: 179 IQMVFGDTVVAAIMEARRLSRDQYASNHPAGKIGKSLIFKVKDVMKKQNELPLCKEGDMI 238

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVI 296
           +D +T L+ K  GC+ VVD+   L G  T+GD+ R      + +  L+V ++  ++P+ I
Sbjct: 239 MDQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKASGQAIFNLTVGEMCNRHPRTI 298

Query: 297 LEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             D +   AM+ +      +  L VVD      GI+    L+  G+
Sbjct: 299 TADAMAVQAMEKMESPPSPVQFLPVVDSNNVVCGIITLHGLVSAGL 344


>gi|293333190|ref|NP_001170584.1| hypothetical protein LOC100384615 [Zea mays]
 gi|238006162|gb|ACR34116.1| unknown [Zea mays]
          Length = 378

 Score =  158 bits (399), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 156/287 (54%), Gaps = 10/287 (3%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            G V  TG+GKSG +  K A TLAS G   + F+   +A HGD+G +   D++++LS SG
Sbjct: 92  PGAVFFTGVGKSGIVARKTAQTLASLGFARAGFLAPVDALHGDIGALFPGDVLVLLSKSG 151

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SDEL A++  AR     L+++TS        +A   D+ + LP + E CP GLAP TS 
Sbjct: 152 ASDELLALVPCARAKGGYLVSVTSAASGADCPLAAACDLNVHLPLQGEVCPFGLAPVTST 211

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCP 238
            +Q+  GD +  A++E+R  S + +   HP GK+G TL     DVM   + +PL K G  
Sbjct: 212 AIQMVFGDTVIAAIMEARRLSRDQYASNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDM 271

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKV 295
           ++D +T L+ K  GC+ VVDE   L G  T+GD+ R        + +L+V ++  +NP+ 
Sbjct: 272 IMDQLTELTSKGCGCLLVVDEEHHLIGTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRT 331

Query: 296 ILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I  D +   AM+ +      +  L VV+D     GI+    L+  G+
Sbjct: 332 ITADAMAVEAMEKMESPPSPVQFLPVVNDNNVVCGIITLHGLVSAGL 378


>gi|28210619|ref|NP_781563.1| polysialic acid capsule expression protein kpsF [Clostridium tetani
           E88]
 gi|28203057|gb|AAO35500.1| polysialic acid capsule expression protein kpsF [Clostridium tetani
           E88]
          Length = 203

 Score =  157 bits (397), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 79/166 (47%), Positives = 108/166 (65%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   +  AV+ I   KG+VV TG+GKSGHIG KLA+T ASTGTP+FFVH+ EA HGDLGM
Sbjct: 28  LDENYEKAVDLIHNCKGKVVFTGVGKSGHIGEKLAATFASTGTPAFFVHSTEALHGDLGM 87

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I   D++I +S SG + E+ +I+   +     +I+IT  N S +A  +D+ L    + E+
Sbjct: 88  IEEKDIVIAISNSGETKEVLSIISSIKYIGSKIISITGNNNSSLAKESDVALEAKVDHEA 147

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            P  LAPT+S+ + L +GDALAI L + + F   +F V HPGG LG
Sbjct: 148 DPLNLAPTSSSTVALVLGDALAITLSQLKEFKRENFAVFHPGGSLG 193


>gi|315453547|ref|YP_004073817.1| Arabinose 5-phosphate isomerase [Helicobacter felis ATCC 49179]
 gi|315132599|emb|CBY83227.1| Arabinose 5-phosphate isomerase [Helicobacter felis ATCC 49179]
          Length = 325

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/271 (35%), Positives = 154/271 (56%), Gaps = 13/271 (4%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V + G+GKS HIG K+ +TL STGT + F+H  EA HGD+G++   D+I+ +S+ G S E
Sbjct: 46  VAVMGVGKSAHIGRKITATLTSTGTKAVFLHPTEALHGDMGIVGEKDVILAISYGGESAE 105

Query: 127 LKAILYYARRFSIP---LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               L  A RF IP   +I ++    S +   ++  L+L  + E+C   + PTTS  + L
Sbjct: 106 ----LLEALRF-IPCGGIIGMSKSPNSSLGKLSNHHLSLNIKKEACSFNMVPTTSTTLSL 160

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           A+GD LA+ L+  + F+++DF   HPGG LG         ++   ++PLV     L +A+
Sbjct: 161 ALGDVLAVCLMAHKGFTQSDFARYHPGGLLGKKMHLRVRDIYRTHALPLVSAQASLHEAL 220

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
              + +  G   +VDE QKL G++++GDI R     H D +  + E   + NPK I +  
Sbjct: 221 LEATHQGLGNALLVDENQKLVGVLSDGDIRRALLEPHFDRSAPAREFATL-NPKTIQDPN 279

Query: 301 LLTV-AMQLLRQHNISVLMVVDDCQKAIGIV 330
           +L + A+  +  H IS+L+V+D  +K +G+V
Sbjct: 280 MLVLDALNFIETHQISLLIVLDAHKKVLGVV 310


>gi|148238574|ref|YP_001223961.1| polysialic acid capsule expression protein [Synechococcus sp. WH
           7803]
 gi|147847113|emb|CAK22664.1| Polysialic acid capsule expression protein [Synechococcus sp. WH
           7803]
          Length = 340

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 158/288 (54%), Gaps = 15/288 (5%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++G L+    CA  K K     +VITG+GKSG +  K+A+T +S G  + +++  +A HG
Sbjct: 39  VEGALTLLERCADRKAK-----LVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHG 93

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++  DD+ ++LS SG + EL  +L + +R     IA+     S +A  +D+ L    
Sbjct: 94  DLGVVAADDVCLLLSNSGETAELLDLLPHLKRRGTARIALVGRADSSLARGSDVALDASV 153

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP  LAPT S  + +AIGDALA   +E R  S+ DF + HP G LG  L +  +D+
Sbjct: 154 DREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISQADFALNHPAGALGKQLTMTVADL 213

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH---- 277
           M     +P +    PL + I+ L++   G   V D  Q  +L+G+IT+GD+ R       
Sbjct: 214 MVPVAQLPSITPATPLAEVISGLTQGAIGSGWVEDSSQPGRLQGLITDGDLRRALRDHGP 273

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDD 322
           +   TL+  ++M  +P  +  D L   A+Q +   R+  ISVL VVD+
Sbjct: 274 ERWPTLTAGELMTADPITVSADLLAVEAIQRMEHNRRKPISVLPVVDE 321


>gi|326528327|dbj|BAJ93345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 434

 Score =  157 bits (396), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 156/286 (54%), Gaps = 10/286 (3%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G V  TG+GKSG +  KLA TLAS G   + F+   +A HGD+G +   D++++LS SG+
Sbjct: 149 GAVFFTGVGKSGIVARKLAQTLASLGFARAGFLSPVDALHGDIGSLFPGDVLVLLSKSGA 208

Query: 124 SDELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SDEL A++  AR     LI++TS        +A   D+ + LP + E CP GLAP TS  
Sbjct: 209 SDELLALVPCARAKGARLISLTSAASGADCPLAAACDLNVHLPLQGEVCPFGLAPVTSTA 268

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPL 239
           +Q+  GD +  A++E+R  + + +   HP GK+G TL     DVM   + +PL K G  +
Sbjct: 269 IQMVFGDTVVAAIMEARRLTRDQYAANHPAGKIGKTLIFKVKDVMKKQNDLPLCKEGDMI 328

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVI 296
           +D +T L+ K  GC+ VVD+   L G  T+GD+ R        + +L+V ++  +NP+ I
Sbjct: 329 MDQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTI 388

Query: 297 LEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               +   AM+ +      +  L VVDD     GI+    L+  G+
Sbjct: 389 TAGAMAVEAMEKMESPPSPVQFLPVVDDKNVVSGIITLHGLVSAGL 434


>gi|255308008|ref|ZP_05352179.1| putative phosphosugar isomerase [Clostridium difficile ATCC 43255]
          Length = 199

 Score =  156 bits (395), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 109/175 (62%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           E   ++   V +I   +G+V+  G+GKS HIG KLA+T ASTGTPSFFVHA EA HGDLG
Sbjct: 24  EAGIEYESIVSEIANCEGKVIFMGVGKSAHIGKKLAATFASTGTPSFFVHATEAVHGDLG 83

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+ I++S SG+S E+   + Y +      IA TS   SV+A   D  L  P++ E
Sbjct: 84  MIESKDITILISNSGNSMEVVNCIKYIKAIGSKTIAFTSNRNSVLAKECDYALIYPEKDE 143

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           +    LAPTTS+ + L +GD++A AL +S NF  +DFY  HPGG LG     A++
Sbjct: 144 ADHLNLAPTTSSTITLVLGDSIACALSKSSNFGSSDFYKYHPGGSLGEKLKTANN 198


>gi|300173238|ref|YP_003772404.1| arabinose 5-phosphate isomerase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887617|emb|CBL91585.1| arabinose 5-phosphate isomerase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 318

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 105/300 (35%), Positives = 161/300 (53%), Gaps = 8/300 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +++  L   F   VE I   KGR +   IGKSG I  K+A++L+S G PSFF+ A  A H
Sbjct: 21  TVRETLDENFDEVVEAILNTKGRSIFIAIGKSGIIAEKIAASLSSVGVPSFFIDAGTAYH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENKSVVACHADIVL 160
           GDLG ++ DDL+I +S SG + E+   L+  +      +  IA+T    + +A + DI L
Sbjct: 81  GDLGRVSADDLVIFISNSGETQEVVQTLFALKNIHQNELKTIALTGSEDATLAKNTDIFL 140

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +    E+ P  LAPT+S    L +GDAL IA+ +++ F   DF + HPGG +G + +  
Sbjct: 141 KVDVAEEADPTKLAPTSSTTATLVMGDALLIAVEKAKAFKRADFALYHPGGSIGKMLL-- 198

Query: 221 SDVMHSGDS-IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-- 277
            DV HS  + IP V+   P+ D I  +S+   G   V    +K+ GIIT+GDI + F   
Sbjct: 199 RDVAHSMHTKIPYVQTTTPINDVIYRISDFGVGMTLVKTPEEKVIGIITDGDIRKKFLYI 258

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +   +  D M +    I ++   + A + +  +NIS L+V DD    +GI+   D+L 
Sbjct: 259 NQVKNSTAADYMTEGFISINQNARNSAAWKKMASNNISNLVVKDDDDSVVGIITIHDVLE 318


>gi|29839986|ref|NP_829092.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydophila
           caviae GPIC]
 gi|29834333|gb|AAP04970.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila caviae
           GPIC]
          Length = 329

 Score =  156 bits (395), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/318 (33%), Positives = 166/318 (52%), Gaps = 10/318 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  +K  L    ++ Q E ++      EKI   +G +  +G+GKSG I  K+A+TL S G
Sbjct: 15  ITKQKESLERFFATFQCEGTWLL---AEKILNHQGSIFFSGVGKSGCIARKIAATLQSFG 71

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +FF+ + +  HGD G++   D++ + S SG + EL   + Y +   + +  ITS   S
Sbjct: 72  ERAFFLCSGDLLHGDFGVVRPGDIVCLFSKSGETRELLEWIPYFKERGVFIAGITSSAYS 131

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A   D V+ LP   E  P  L PTTS   QL  GD L+I LL SR  S  D+   HPG
Sbjct: 132 SLAILCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLSITLLRSRGISLADYGKNHPG 191

Query: 211 GKLGTLFVCA-SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G++G   V    D M     +P       + D++ I S    GCV VV+E  ++ GI T+
Sbjct: 192 GQIGLKVVGKIRDYMFPKTEVPFCSPDNTVADSLDIFSSYGCGCVCVVNELFEILGIFTD 251

Query: 270 GDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVD--DC 323
           GD+ R   +   D+    ++D+M  +P+VI ED  + + +Q++   N +S+L VVD  D 
Sbjct: 252 GDLRRALSRHGGDILLQKLKDIMTPSPRVISEDADVLLGLQMMETGNPVSILPVVDAKDQ 311

Query: 324 QKAIGIVHFLDLLRFGII 341
           +  +G++    L + G+I
Sbjct: 312 KYVVGLLQMHTLAKAGLI 329


>gi|166155485|ref|YP_001653740.1| carbohydrate isomerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|165931473|emb|CAP07049.1| carbohydrate isomerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 328

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 166/302 (54%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  SFHYDCVHQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  
Sbjct: 87  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++
Sbjct: 147 ELDPFDLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLY 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++  LS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 207 PRTEVPFCSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M +NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 267 YPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|225438103|ref|XP_002277616.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/319 (31%), Positives = 170/319 (53%), Gaps = 16/319 (5%)

Query: 38  LSSLESSLQGELSFQFH--------CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L +L  + Q  L+F FH           + +  I+G +  TG+GKSG +  K++ TL S 
Sbjct: 22  LMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTIFFTGVGKSGFVAQKISQTLVSL 81

Query: 90  GTPSFFVHAAEASHGDLGMIT--RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           G  + F+   +A HGD+G+++    + ++  S SG+S+EL  +   A+     LI++TS 
Sbjct: 82  GIRASFLSPVDALHGDIGILSGGTSNAVVFFSKSGNSEELLKLAPCAKAKGAYLISVTST 141

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             +++    D+ + LP E E CP  LAP TS  +Q+  GD +A+AL+ +RN + +++   
Sbjct: 142 EDNLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVFGDTVAVALMGARNLTRDEYAAN 201

Query: 208 HPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HP G++G +L     DVM   D +P+ K G  ++D +  L+ K  GC+ V+D+  +L G 
Sbjct: 202 HPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEYRLIGT 261

Query: 267 ITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMVVD 321
            T+GD+ R      + +  L+V  +  +NP+ I  + +   AM+ +      +  L V+D
Sbjct: 262 FTDGDLRRTLKASGEGIFKLTVGQMCNRNPRTISSNVMAVDAMRRMEAPPSPVQFLPVLD 321

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D    IGIV    L+  G+
Sbjct: 322 DQNVLIGIVTLHGLVSAGL 340


>gi|255348764|ref|ZP_05380771.1| carbohydrate isomerase [Chlamydia trachomatis 70]
 gi|255503304|ref|ZP_05381694.1| carbohydrate isomerase [Chlamydia trachomatis 70s]
 gi|255506983|ref|ZP_05382622.1| carbohydrate isomerase [Chlamydia trachomatis D(s)2923]
 gi|289525441|emb|CBJ14918.1| carbohydrate isomerase [Chlamydia trachomatis Sweden2]
 gi|296434993|gb|ADH17171.1| carbohydrate isomerase [Chlamydia trachomatis E/150]
 gi|296438713|gb|ADH20866.1| carbohydrate isomerase [Chlamydia trachomatis E/11023]
          Length = 328

 Score =  156 bits (394), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 165/302 (54%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  SFHYDCVHQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  
Sbjct: 87  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D  +
Sbjct: 147 ELDPFNLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYFY 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++  LS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 207 PRTEVPFCSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M +NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 267 YPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|78183795|ref|YP_376229.1| KpsF/GutQ [Synechococcus sp. CC9902]
 gi|78168089|gb|ABB25186.1| KpsF/GutQ [Synechococcus sp. CC9902]
          Length = 342

 Score =  156 bits (394), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 167/308 (54%), Gaps = 13/308 (4%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           SS Q E + Q    +E+    K ++VITG+GKSG +  K+A+T +S G  + +++  +A 
Sbjct: 37  SSEQVEAAIQL---LERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAL 93

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLG++  +D+ ++LS SG + EL  +L + +R     IAI    +S +   +D+VL  
Sbjct: 94  HGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRRGTGRIAIVGRAESSLGRGSDVVLEA 153

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCAS 221
             + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L + A+
Sbjct: 154 SIDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTMTAA 213

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-- 277
           D+M     +  ++    L D I  L+    G   V D      L GI+T+GD+ R     
Sbjct: 214 DLMVPVSKLHPLQPDTSLPDVIGGLTRDGIGSGWVEDPTSPGSLMGILTDGDLRRALQDH 273

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHF 332
                ++L+  D+M  +P  +  D L+  A++ +   R+  ISVL VV D ++ IG++  
Sbjct: 274 NANTWSSLTAADLMTADPITVRADVLVVKALEQMENNRRKAISVLPVVGDNKQLIGLLRL 333

Query: 333 LDLLRFGI 340
            DL++ G+
Sbjct: 334 HDLVQAGL 341


>gi|126700646|ref|YP_001089543.1| putative phosphosugar isomerase [Clostridium difficile 630]
 gi|254976575|ref|ZP_05273047.1| putative phosphosugar isomerase [Clostridium difficile QCD-66c26]
 gi|255093959|ref|ZP_05323437.1| putative phosphosugar isomerase [Clostridium difficile CIP 107932]
 gi|255102139|ref|ZP_05331116.1| putative phosphosugar isomerase [Clostridium difficile QCD-63q42]
 gi|255315711|ref|ZP_05357294.1| putative phosphosugar isomerase [Clostridium difficile QCD-76w55]
 gi|255518372|ref|ZP_05386048.1| putative phosphosugar isomerase [Clostridium difficile QCD-97b34]
 gi|255651490|ref|ZP_05398392.1| putative phosphosugar isomerase [Clostridium difficile QCD-37x79]
 gi|260684547|ref|YP_003215832.1| putative phosphosugar isomerase [Clostridium difficile CD196]
 gi|260688205|ref|YP_003219339.1| putative phosphosugar isomerase [Clostridium difficile R20291]
 gi|306521312|ref|ZP_07407659.1| putative phosphosugar isomerase [Clostridium difficile QCD-32g58]
 gi|115252083|emb|CAJ69921.1| putative phosphosugar isomerase [Clostridium difficile]
 gi|260210710|emb|CBA65534.1| putative phosphosugar isomerase [Clostridium difficile CD196]
 gi|260214222|emb|CBE06497.1| putative phosphosugar isomerase [Clostridium difficile R20291]
          Length = 199

 Score =  155 bits (393), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 81/175 (46%), Positives = 108/175 (61%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           E   ++   V +I   +G+V+  G+GKS HIG KLA+T ASTGTPSFFVHA EA HGDLG
Sbjct: 24  EAGIEYESIVSEIANCEGKVIFMGVGKSAHIGKKLAATFASTGTPSFFVHATEAVHGDLG 83

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+ I++S SG+S E+   + Y +      IA TS   SV+A   D  L  P + E
Sbjct: 84  MIESKDITILISNSGNSMEVVNCIKYIKAIGSKTIAFTSNRNSVLAKECDYALIYPAKDE 143

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           +    LAPTTS+ + L +GD++A AL +S NF  +DFY  HPGG LG     A++
Sbjct: 144 ADHLNLAPTTSSTITLVLGDSIACALSKSSNFGSSDFYKYHPGGSLGEKLKTANN 198


>gi|329942540|ref|ZP_08291350.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
           Cal10]
 gi|332287172|ref|YP_004422073.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
 gi|313847768|emb|CBY16758.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506892|gb|ADZ18530.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
 gi|328815450|gb|EGF85438.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
           Cal10]
 gi|328914417|gb|AEB55250.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
           6BC]
          Length = 329

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/321 (32%), Positives = 170/321 (52%), Gaps = 11/321 (3%)

Query: 29  RSIIAEKR-GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           + I++++R  L     S Q E ++      EKI   +G +  +G+GKSG I  K+ +TL 
Sbjct: 12  QDIVSKQRESLERFFDSFQCEDTWVL---AEKILNHQGSIFFSGVGKSGCIARKIVATLQ 68

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           S G  + F+ + +  HGDLG++   D++ + S SG + EL   + Y +   + +  ITS 
Sbjct: 69  SFGERALFLASGDLLHGDLGVVRPGDIVCLFSKSGETRELLECIPYLKERGVFIAGITSA 128

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A   D V+ LP   E  P  L PTTS   QL  GD LAI LL SR  S  D+   
Sbjct: 129 TYSSLAVLCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLAITLLRSRQISLADYGKN 188

Query: 208 HPGGKLGTLFVCA-SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPGG++G   +    D M     +P       + D++ I S    GCV +V+E  ++ GI
Sbjct: 189 HPGGQIGLKVIGKIRDYMFPKTEVPFCSPEDTIADSLDIFSSYGCGCVCIVNEKFEILGI 248

Query: 267 ITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVD- 321
            T+GD+ R+  +   D+ +  ++DVM  NP+VI ED  + + +Q++   + +++L VVD 
Sbjct: 249 FTDGDLRRSLTRHGGDILSQRLKDVMTPNPRVISEDADVLLGLQMMETGSPVTILPVVDA 308

Query: 322 -DCQKAIGIVHFLDLLRFGII 341
            D +  +G++    L + G+I
Sbjct: 309 KDQKYVVGLLQMHTLAKAGLI 329


>gi|224082832|ref|XP_002306858.1| predicted protein [Populus trichocarpa]
 gi|222856307|gb|EEE93854.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 157/283 (55%), Gaps = 6/283 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G +  +G+GKSG + +K++ TL S G  + F+   +A HGD+G ++  D++++ S SG+
Sbjct: 59  NGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPVDALHGDIGALSSSDILVLFSKSGN 118

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++EL  ++  A+     L+++TS   + +    D+ + LP E E CP  LAP TS  +Q+
Sbjct: 119 TEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDMNVHLPLERELCPFDLAPVTSTAIQM 178

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
             GD +AIAL+ +RN S+ ++   HP G++G +L     DVM   + +P+ K G  ++D 
Sbjct: 179 VFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQ 238

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILED 299
           +  L+ K  GC+ V+DE   L G  T+GD+ R      + +  L+V ++  +NP+ I  D
Sbjct: 239 LVELTSKGCGCLLVIDEDSHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRNPRTIGPD 298

Query: 300 TLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +   AM+ +      +  L V+ D    IGIV    L+  G+
Sbjct: 299 AMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>gi|195641434|gb|ACG40185.1| hypothetical protein [Zea mays]
          Length = 347

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 10/286 (3%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G V  TG+GKSG +  K A TLAS G   + F+   +A HGD+G +   D++++LS SG+
Sbjct: 62  GAVFFTGVGKSGIVARKTAQTLASLGLARAGFLAPVDALHGDIGALFPGDVLVILSKSGA 121

Query: 124 SDELKAILYYARRFSIPLIAITSE---NKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SDEL A+   AR     L+++TS    +   +A   D+ + LP + E CP GLAP TS  
Sbjct: 122 SDELLALAPCARAKGAYLVSLTSAASGDDCPLAAACDLNVHLPLQGEVCPFGLAPVTSTA 181

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPL 239
           +Q+  GD +  A++E+R  S + +   HP GK+G TL     DVM   + +PL K G  +
Sbjct: 182 IQMVFGDTVIAAIMEARRLSRDQYASNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMI 241

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVI 296
           +D +T L+ K  GC+ VVDE   L G  T+GD+ R        + +L+V ++  +NP+ I
Sbjct: 242 MDQLTELTSKGCGCLLVVDEEHHLIGTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTI 301

Query: 297 LEDTLLTVAMQLLR--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + +   AM+ +      +  L VV++     GI+    L+  G+
Sbjct: 302 TAEAMAVEAMEKMEAPPSPVQFLPVVNENNVVCGIITLHGLVSAGL 347


>gi|15605124|ref|NP_219909.1| GutQ/KpsF family sugar-P isomerase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76789130|ref|YP_328216.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           trachomatis A/HAR-13]
 gi|237802824|ref|YP_002888018.1| carbohydrate isomerase [Chlamydia trachomatis B/Jali20/OT]
 gi|255311205|ref|ZP_05353775.1| carbohydrate isomerase [Chlamydia trachomatis 6276]
 gi|255317506|ref|ZP_05358752.1| carbohydrate isomerase [Chlamydia trachomatis 6276s]
 gi|7388411|sp|O84404|Y399_CHLTR RecName: Full=Uncharacterized protein CT_399
 gi|3328826|gb|AAC67996.1| GutQ/KpsF Family Sugar-P Isomerase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167660|gb|AAX50668.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           A/HAR-13]
 gi|231274058|emb|CAX10852.1| carbohydrate isomerase [Chlamydia trachomatis B/Jali20/OT]
 gi|296435920|gb|ADH18094.1| carbohydrate isomerase [Chlamydia trachomatis G/9768]
 gi|296436846|gb|ADH19016.1| carbohydrate isomerase [Chlamydia trachomatis G/11222]
 gi|296437780|gb|ADH19941.1| carbohydrate isomerase [Chlamydia trachomatis G/11074]
 gi|297140280|gb|ADH97038.1| carbohydrate isomerase [Chlamydia trachomatis G/9301]
          Length = 328

 Score =  155 bits (392), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  SFHYDCVHQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  
Sbjct: 87  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++
Sbjct: 147 ELDPFNLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLY 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++  LS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 207 PRTEVPFCSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M +NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 267 YPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|297748529|gb|ADI51075.1| Carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           D-EC]
 gi|297749409|gb|ADI52087.1| Carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           D-LC]
          Length = 331

 Score =  155 bits (392), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 166/302 (54%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 31  SFHYDCVHQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 89

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  
Sbjct: 90  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLE 149

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++
Sbjct: 150 ELDPFNLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLY 209

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++  LS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 210 PRTEVPFCSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 269

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M +NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 270 YPLQQIMTRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 329

Query: 340 II 341
           ++
Sbjct: 330 LL 331


>gi|224066237|ref|XP_002302040.1| predicted protein [Populus trichocarpa]
 gi|118483855|gb|ABK93818.1| unknown [Populus trichocarpa]
 gi|222843766|gb|EEE81313.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 157/283 (55%), Gaps = 6/283 (2%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G +  +G+GKSG + +K++ TL S G  + F+   +A HGD+G ++  D++++ S SG+
Sbjct: 59  NGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGN 118

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++EL  ++  A+     L+++TS   + +    D+ + LP E E CP  LAP TS  +Q+
Sbjct: 119 TEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQM 178

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
             GD +AIAL+ +RN S+ ++   HP G++G +L     DVM   + +P+ K G  ++D 
Sbjct: 179 VFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQ 238

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILED 299
           +  L+ K  GC+ V+DE   L G  T+GD+ R      + +  L+V ++  +NP+ I  D
Sbjct: 239 LVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPD 298

Query: 300 TLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +   AM+ +      +  L V+ D    IGIV    L+  G+
Sbjct: 299 AMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>gi|78211735|ref|YP_380514.1| KpsF/GutQ family protein [Synechococcus sp. CC9605]
 gi|78196194|gb|ABB33959.1| KpsF/GutQ family protein [Synechococcus sp. CC9605]
          Length = 337

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/306 (33%), Positives = 164/306 (53%), Gaps = 15/306 (4%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           ++  L+    CA  K K     +VITG+GKSG +  K+A+T +S G  + F++  +A HG
Sbjct: 36  VEAALALLDRCANRKAK-----LVITGVGKSGIVARKIAATFSSIGLMALFLNPTDALHG 90

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++  +D+ ++LS SG + EL  +L +  R     IAI     S +A  +D+VL    
Sbjct: 91  DLGVVAAEDVCLLLSNSGETTELLEVLPHLTRRGTGRIAIVGRADSSLARGSDVVLEASV 150

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG  L + ASD+
Sbjct: 151 DREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTLTASDL 210

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGC--VAVVDEGQKLKGIITEGDIFRNFH---- 277
           M     +  ++   PL + I  L+    G   V   D    L GI+T+GD+ R       
Sbjct: 211 MVPASQLHPLQPHTPLPEVIGGLTRDGIGSGWVENPDSPGSLLGILTDGDLRRALQDHGA 270

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLD 334
           +    L+ +D+M  +P  +  D L+  A++ +   R+  ISVL VV+  ++ +G++   D
Sbjct: 271 ETWTHLTAKDLMTADPITVQTDVLVVKALEQMERNRRKPISVLPVVNQDKQLMGLLRLHD 330

Query: 335 LLRFGI 340
           L++ G+
Sbjct: 331 LVQAGL 336


>gi|226493548|ref|NP_001144421.1| hypothetical protein LOC100277365 [Zea mays]
 gi|195641864|gb|ACG40400.1| hypothetical protein [Zea mays]
          Length = 347

 Score =  155 bits (391), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 156/286 (54%), Gaps = 10/286 (3%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G V  TG+GKSG +  K A TLAS G   + F+   +A HGD+G +   D++++LS SG+
Sbjct: 62  GAVFFTGVGKSGIVARKTAQTLASLGLARAGFLAPVDALHGDIGALFPGDVLVLLSKSGA 121

Query: 124 SDELKAILYYARRFSIPLIAITSE---NKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SDEL A+   AR     L+++TS    +   +A   D+ + LP + E CP GLAP TS  
Sbjct: 122 SDELLALAPCARAKGAYLVSLTSAASGDDCPLAAACDLNVHLPLQGEVCPFGLAPVTSTA 181

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPL 239
           +Q+  GD +  A++E+R  S + +   HP GK+G TL     DVM   + +PL K G  +
Sbjct: 182 IQMVFGDTVIAAIMEARRLSRDQYASNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMI 241

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVI 296
           +D +T L+ K  GC+ VVDE   L G  T+GD+ R        + +L+V ++  +NP+ I
Sbjct: 242 MDQLTELTSKGCGCLLVVDEEHHLIGTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTI 301

Query: 297 LEDTLLTVAMQLLR--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + +   AM+ +      +  L VV++     GI+    L+  G+
Sbjct: 302 TAEAMAVEAMEKMEAPPSPVQFLPVVNENNVVCGIITLHGLVSAGL 347


>gi|242060564|ref|XP_002451571.1| hypothetical protein SORBIDRAFT_04g004050 [Sorghum bicolor]
 gi|241931402|gb|EES04547.1| hypothetical protein SORBIDRAFT_04g004050 [Sorghum bicolor]
          Length = 345

 Score =  154 bits (390), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 156/286 (54%), Gaps = 10/286 (3%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G V  TG+GKSG +  K+A TLAS G   + F+   +A HGD+G +   D+++++S SG+
Sbjct: 60  GAVFFTGVGKSGIVACKIAQTLASLGFARAGFLAPVDALHGDIGALFPGDVLVLISKSGA 119

Query: 124 SDELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SDEL A+   AR     LI++TS        +A   D+ + LP + E CP GLAP TS  
Sbjct: 120 SDELLALAPCARAKGAYLISLTSAASGAECPLAAACDLNVHLPLQGEVCPFGLAPVTSTA 179

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPL 239
           +Q+  GD +  A++E+R  S + +   HP GK+G TL     DVM   + +PL K G  +
Sbjct: 180 IQMVFGDTVIAAIMEARRLSRDQYASNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMI 239

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVI 296
           ++ +T L+ K  GC+ VVDE   L G  T+GD+ R        + +L+V ++  +NP+ I
Sbjct: 240 MEQLTELTSKGCGCLLVVDEEHHLIGTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTI 299

Query: 297 LEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + +   AM+ +      +  L V++D     GI+    L+  G+
Sbjct: 300 TAEAMAVEAMEKMESPPSPVQFLPVINDNNIVCGIITLHGLVSAGL 345


>gi|317011561|gb|ADU85308.1| hypothetical protein HPSA_06730 [Helicobacter pylori SouthAfrica7]
          Length = 329

 Score =  154 bits (389), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 102/279 (36%), Positives = 163/279 (58%), Gaps = 4/279 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI G+GKS  +  K+++++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S
Sbjct: 50  GKLVIVGVGKSALVAQKISASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGES 109

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA
Sbjct: 110 LELLNLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLA 169

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GD L   L+ ++NFS+ DF   HPGG LG  LFV   D++ + + +PL+       DA+
Sbjct: 170 LGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTN-LPLIPPDTSFKDAL 228

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILE-DTL 301
             +SEKR G   +V+   +L G++++GD+ R   K ++  S V       PK     D L
Sbjct: 229 IEMSEKRLGSAILVNANNELVGVLSDGDVRRALLKGVSLESEVSYFATLKPKSFKNLDAL 288

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L  A++ L +H I +L+ VD   K +G++H   LL  G+
Sbjct: 289 LLEALEFLERHKIQLLVCVDSQNKVLGVLHLHQLLELGL 327


>gi|237804746|ref|YP_002888900.1| carbohydrate isomerase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273046|emb|CAX09959.1| carbohydrate isomerase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 328

 Score =  154 bits (388), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/302 (32%), Positives = 165/302 (54%), Gaps = 11/302 (3%)

Query: 50  SFQFHCA---VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           SF + C     EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  SFHYDCVHQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  
Sbjct: 87  GVVSPGDIVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMH 225
           E  P  L PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++
Sbjct: 147 ELDPFNLMPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLY 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +P       + +++  LS   +GCV VV+E  +L GI T+GD+ R    +  D+  
Sbjct: 207 PRTEVPFCSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILA 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             ++ +M  NPKVI ED+ + ++++++   N ++VL VVD  Q+   +G++H   L R G
Sbjct: 267 YPLQQIMTHNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|15835294|ref|NP_297053.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Nigg]
 gi|270285467|ref|ZP_06194861.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Nigg]
 gi|270289478|ref|ZP_06195780.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Weiss]
 gi|301336864|ref|ZP_07225066.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum MopnTet14]
 gi|14195468|sp|Q9PJZ7|Y679_CHLMU RecName: Full=Uncharacterized protein TC_0679
 gi|7190713|gb|AAF39499.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydia muridarum Nigg]
          Length = 328

 Score =  154 bits (388), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 163/302 (53%), Gaps = 13/302 (4%)

Query: 52  QFHCAV-----EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
            FHC V     E++   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDL
Sbjct: 28  NFHCDVVRQLTERLLCHQGAVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDL 86

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++  D++ + S SG + E+   + + +   + L+ ITS   S +A  +D V+ LPK  
Sbjct: 87  GVVSSGDIVCLFSNSGETREILEWIPHLKNRQVFLVGITSSPCSSLAVFSDFVVMLPKLE 146

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMH 225
           E  P  L PTTS   QL   D LA+ +L  R  S +D+   HP G++G        D + 
Sbjct: 147 ELDPFNLIPTTSTTCQLLFSDLLAMTVLRCRKISLSDYGKNHPSGQIGLKANGKVRDYLS 206

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
               +P       + +A+T+LS   +GCV VV+E  +L GI T+GD+ R   +    +  
Sbjct: 207 PRTEVPFCSPSITVSEALTVLSSYGYGCVCVVNEQFELLGIFTDGDLRRGLSECGGAILE 266

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKA--IGIVHFLDLLRFG 339
             +E VM + PKVI ED+ + + ++++   N ++VL VVD   +   +G++H   L R G
Sbjct: 267 CPLEQVMTRKPKVISEDSDVLLGLEMMESGNPVTVLPVVDAQHQRFIVGLLHMHTLARAG 326

Query: 340 II 341
           ++
Sbjct: 327 LL 328


>gi|62184858|ref|YP_219643.1| hypothetical protein CAB215 [Chlamydophila abortus S26/3]
 gi|62147925|emb|CAH63672.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 329

 Score =  153 bits (386), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 156/291 (53%), Gaps = 7/291 (2%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           EKI   +G +  +G+GKSG I  K+ +TL S G  + F+ + +  HGDLG++   D++ +
Sbjct: 39  EKILHHQGSIFFSGVGKSGCIARKIVATLQSFGEHALFLASGDLLHGDLGVVRPGDIVCL 98

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            S SG + EL   + Y +   + +  ITS   S +A   D V+ LP   E  P  L PTT
Sbjct: 99  FSKSGETRELLECIPYLKERGVFIAGITSATYSSLAVLCDHVVILPMIEELDPFNLVPTT 158

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SDVMHSGDSIPLVKIG 236
           S   QL  GD LAI LL SR  S  D+   HPGG++G   +    D M     +P     
Sbjct: 159 STTCQLLFGDLLAITLLRSRQISLADYGKNHPGGQIGLKVIGKIRDYMFLKTEVPFCSPE 218

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNP 293
             + D++ I S    GCV +V+E  ++ GI T+GD+ R   +   D+ +  ++DVM  NP
Sbjct: 219 DTIADSLDIFSSYGCGCVCIVNEKFEILGIFTDGDLRRALARHGGDILSQRLQDVMTPNP 278

Query: 294 KVILEDTLLTVAMQLLRQHN-ISVLMVVD--DCQKAIGIVHFLDLLRFGII 341
           +VI ED  + + +Q++   + +++L VVD  D +  +G++    L + G+I
Sbjct: 279 RVISEDADVLLGLQMMETGSPVTILPVVDAKDQKYVVGLLQMHTLAKAGLI 329


>gi|320089684|pdb|2XHZ|A Chain A, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089685|pdb|2XHZ|B Chain B, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089686|pdb|2XHZ|C Chain C, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089687|pdb|2XHZ|D Chain D, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
          Length = 183

 Score =  152 bits (384), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 76/147 (51%), Positives = 102/147 (69%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  A EK+   KG+VV+ G+G SGHIG K+A+T ASTGTPSFFVH  EA+HGDLGM+T 
Sbjct: 37  NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTP 96

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++I +S SG S E+ A++   +R  +PLI IT   +S +A  AD+ L +    E+CP 
Sbjct: 97  QDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVAKEACPL 156

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
           GLAPT+S    L +GDALA+ALL++R 
Sbjct: 157 GLAPTSSTTATLVMGDALAVALLKARG 183


>gi|89898595|ref|YP_515705.1| sugar-phosphate isomerase-like protein [Chlamydophila felis
           Fe/C-56]
 gi|89331967|dbj|BAE81560.1| sugar-phosphate isomerase-like protein [Chlamydophila felis
           Fe/C-56]
          Length = 329

 Score =  151 bits (382), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 157/291 (53%), Gaps = 7/291 (2%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           EKI   +G V  +G+GKSG I  K+ +TL S G  + F+ + +  HGDLG++   D++ +
Sbjct: 39  EKILHHQGSVFFSGVGKSGCIARKVVATLQSFGERALFLPSGDLLHGDLGLVQHGDIVCL 98

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            S SG + E+   + Y +   + ++ ITS   S +A   D V+ LP   E  P  L PTT
Sbjct: 99  FSKSGETREILEWIPYLKERGVFIVGITSAAYSSLAILCDHVVILPMIEELDPFNLVPTT 158

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA-SDVMHSGDSIPLVKIG 236
           S   QL  GD L+I LL SR  S  D+   HPGG++G   +    D M     +P     
Sbjct: 159 STTCQLLFGDLLSITLLRSRGISLADYGKNHPGGQIGLKVIGKIRDYMFPKTEVPFCSPE 218

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNP 293
             + D++ + S    GCV VV+E  ++ G+ T+GD+ R   +   ++ +  +++VM  NP
Sbjct: 219 NTIADSLDVFSSYGCGCVCVVNEKFEILGVFTDGDLRRALSRHGGEILSQQLKNVMTPNP 278

Query: 294 KVILEDTLLTVAMQLLRQHN-ISVLMVVD--DCQKAIGIVHFLDLLRFGII 341
           +VI ED  + + +Q++   + I++L VVD  D +  +G++    L + G+I
Sbjct: 279 RVIREDADVILGLQMMETGSPITILPVVDAKDQRYVVGLLQMHTLAKAGLI 329


>gi|289824455|ref|ZP_06544031.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 249

 Score =  149 bits (377), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 135/247 (54%), Gaps = 2/247 (0%)

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H AEA HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A
Sbjct: 3   HPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAA 62

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT- 215
             VL +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  
Sbjct: 63  KAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGAR 122

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           L      +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R 
Sbjct: 123 LLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRW 182

Query: 276 F-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D
Sbjct: 183 LVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQD 242

Query: 335 LLRFGII 341
             + GII
Sbjct: 243 FYQAGII 249


>gi|116491321|ref|YP_810865.1| sugar phosphate isomerase [Oenococcus oeni PSU-1]
 gi|116092046|gb|ABJ57200.1| Sugar phosphate isomerase with CBS domains [Oenococcus oeni PSU-1]
          Length = 317

 Score =  147 bits (372), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 166/318 (52%), Gaps = 18/318 (5%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R I A++   S+  +++   L  +F   V+ I    GR+V  GIGKS  I  K++++L+S
Sbjct: 8   RDIFAKE---SAELANVAKRLDDKFDKLVDLINDTNGRIVFIGIGKSQIIAEKISASLSS 64

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAIT 145
               SF V A  A HGDLG I+ DDL+I +S SG + E+   L+  +      +  +++T
Sbjct: 65  VSIHSFTVDAGTAYHGDLGRISDDDLLIFVSNSGETQEVVQTLFALQTIYPKGLKTVSLT 124

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A +  +   L    E+   GLAPT+S    L  GDAL  A+ +S +F+ N F 
Sbjct: 125 GNLDSTLATNTGLAFDLGVSKEADTTGLAPTSSTTATLVFGDALLAAMEKSISFNRNQFA 184

Query: 206 VLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKL 263
           + HPGG +G L +     VMH  + +P V    P+ + I  +S+   G   V D +  K 
Sbjct: 185 LYHPGGTIGKLLLQRVKHVMH--EKVPYVNEDTPINEVIYQISDYGIGMTLVKDKDSGKA 242

Query: 264 KGIITEGDIFRNFHKDLNTLSVE-----DVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            GI+T+GDI + F   L+  SV+     D M K    I ++     A QL+  H IS L+
Sbjct: 243 IGIVTDGDIRKKF---LSVQSVKKSVASDYMTKGFVSINQEKRNRTAWQLMANHGISNLV 299

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V+D+ +K +G+V   D+L
Sbjct: 300 VIDNDEKVVGVVTIHDVL 317


>gi|330937993|gb|EGH41774.1| KpsF/GutQ [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 159

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 80/155 (51%), Positives = 107/155 (69%), Gaps = 4/155 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           +T +++S++A  ADI L      E+CP  LAPT+S
Sbjct: 124 LTGDSESILAKAADINLNAHVVHEACPLNLAPTSS 158


>gi|330950266|gb|EGH50526.1| KpsF/GutQ [Pseudomonas syringae Cit 7]
          Length = 165

 Score =  147 bits (370), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 81/162 (50%), Positives = 108/162 (66%), Gaps = 4/162 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8   IQSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +T + +S++A  ADI L      E+CP  LAPT+S    L +
Sbjct: 124 LTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVM 165


>gi|290890875|ref|ZP_06553940.1| hypothetical protein AWRIB429_1330 [Oenococcus oeni AWRIB429]
 gi|290479454|gb|EFD88113.1| hypothetical protein AWRIB429_1330 [Oenococcus oeni AWRIB429]
          Length = 317

 Score =  146 bits (369), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 158/304 (51%), Gaps = 15/304 (4%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           +S+   L  +F   V+ I    GR+V  GIGKS  I  K++++L+S    SF V A  A 
Sbjct: 19  ASVAKRLDDKFDKLVDLINDTNGRIVFIGIGKSQIIAEKISASLSSVSIHSFTVDAGTAY 78

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENKSVVACHADIV 159
           HGDLG I+ DDL+I +S SG + E+   L+  +      +  +++T    S +A +  + 
Sbjct: 79  HGDLGRISDDDLLIFVSNSGETQEVVQTLFALQTIYPKGLKTVSLTGNLDSTLATNTGLA 138

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
             L    E+   GLAPT+S    L  GDAL  A+ +S +F+ N F + HPGG +G L + 
Sbjct: 139 FDLGVSKEADTTGLAPTSSTTATLVFGDALLAAMEKSISFNRNQFALYHPGGTIGKLLLQ 198

Query: 220 -ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFH 277
               VMH  + +P      P+ + I  +S+   G   V D +  K  GI+T+GDI + F 
Sbjct: 199 RVKHVMH--EKVPYANEDTPINEVIYQISDYGIGMTLVKDKDSGKAIGIVTDGDIRKKF- 255

Query: 278 KDLNTLSVE-----DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             L+  SV+     D M K    I ++     A QL+  H IS L+V+D+ +K +G+V  
Sbjct: 256 --LSVQSVKKSVASDYMTKGFVSINQEKRNRTAWQLMANHGISNLVVIDNDEKVVGVVTI 313

Query: 333 LDLL 336
            D+L
Sbjct: 314 HDVL 317


>gi|199598641|ref|ZP_03212056.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           rhamnosus HN001]
 gi|199590448|gb|EDY98539.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           rhamnosus HN001]
          Length = 203

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 75/163 (46%), Positives = 106/163 (65%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+   ++KI  + GR+V  G+GK+GHIG KLA+T AS GTP+ FVHA EA HGD+GMIT 
Sbjct: 31  QYCSVIDKIMHLTGRLVFMGVGKTGHIGVKLAATFASLGTPAIFVHATEAMHGDMGMITS 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL+I++S SG + E  A L   +R     +A T ++ S +A   + VLT+P   E+   
Sbjct: 91  EDLVILISNSGETKETLAPLPSLKRIGAATVAFTGQDDSHLAQACESVLTIPVTHEADDL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           GLAPT+S+   L +GDALA  +   + F+ +DF + HPGG LG
Sbjct: 151 GLAPTSSSTAALMVGDALACTISRLKGFTASDFALYHPGGALG 193


>gi|15232565|ref|NP_191029.1| sugar isomerase (SIS) domain-containing protein / CBS
           domain-containing protein [Arabidopsis thaliana]
 gi|7258373|emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana]
 gi|110742297|dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana]
 gi|332645746|gb|AEE79267.1| sugar isomerase domain-containing protein [Arabidopsis thaliana]
          Length = 350

 Score =  146 bits (369), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 158/282 (56%), Gaps = 6/282 (2%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G V  TG+GKS  + +K++ TL S    S F+   +A HGD+G ++  D+++  S SG++
Sbjct: 69  GTVFFTGVGKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGAT 128

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           +EL  ++  AR     L+++TS + + +A   D+ + LP + E CP  LAP TS  +Q+ 
Sbjct: 129 EELLRLVPCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMV 188

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
            GD +A+AL+ +RN S+ ++   HP G++G +L     DVM   + +P+ K G  ++D +
Sbjct: 189 FGDTIAVALMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEGDLIMDQL 248

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDT 300
             L+ K  GC+ VVDE  +L G  T+GD+ R      + +  LSV ++  + P+ I  +T
Sbjct: 249 VELTSKGCGCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPET 308

Query: 301 LLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   AM+ +      +  L VV++    IGIV    L+  G+
Sbjct: 309 MAVEAMKKMESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350


>gi|239630568|ref|ZP_04673599.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301067722|ref|YP_003789745.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           casei str. Zhang]
 gi|239526851|gb|EEQ65852.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300440129|gb|ADK19895.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           casei str. Zhang]
          Length = 201

 Score =  146 bits (368), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 75/152 (49%), Positives = 100/152 (65%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           + G+VV  G+GKSGHIG KLA+T ASTGTP+FFVHA E+ HGDLGMI+ +D++I++S SG
Sbjct: 41  LHGKVVFMGVGKSGHIGKKLAATFASTGTPAFFVHATESVHGDLGMISSNDVVILISNSG 100

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + E+ A +   +  ++  IA T  + S +A   D VL +P E E+    LAPT S+   
Sbjct: 101 ETKEILAPIRSLKIMNVHTIAFTGNSNSSLAEACDQVLLIPVESEADDMNLAPTNSSTAV 160

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           L +GDA+A AL   RNF   DF V HP G LG
Sbjct: 161 LMVGDAIACALSSIRNFGPKDFAVFHPAGALG 192


>gi|297816764|ref|XP_002876265.1| sugar isomerase domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322103|gb|EFH52524.1| sugar isomerase domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 350

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/282 (32%), Positives = 158/282 (56%), Gaps = 6/282 (2%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G V  TG+GKS  + +K++ TL S    S F+   +A HGD+G ++  D+++  S SG++
Sbjct: 69  GTVFFTGVGKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGAT 128

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           +EL  ++  AR     L+++TS + + +A   D+ + LP + E CP  LAP TS  +Q+ 
Sbjct: 129 EELLRLVPCARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMV 188

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
            GD +A+AL+ +RN S+ ++   HP G++G +L     DVM   + +P+ K G  ++D +
Sbjct: 189 FGDTIAVALMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEGDLIMDQL 248

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDT 300
             L+ K  GC+ VVDE  +L G  T+GD+ R      + +  LSV ++  + P+ I  +T
Sbjct: 249 VELTSKGCGCLLVVDEHYRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPET 308

Query: 301 LLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   AM+ +      +  L VV++    IGIV    L+  G+
Sbjct: 309 MAVEAMKKMESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350


>gi|124024239|ref|YP_001018546.1| polysialic acid capsule expression protein KpsF [Prochlorococcus
           marinus str. MIT 9303]
 gi|123964525|gb|ABM79281.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9303]
          Length = 347

 Score =  146 bits (368), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 150/274 (54%), Gaps = 10/274 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           +E+    + ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDLG++ ++D+ +
Sbjct: 50  LERCGDQRAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAMHGDLGVVAQEDVCL 109

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG + EL  +L + +R     IA+  +  S +A  +D+VL    + E CP  LAPT
Sbjct: 110 LLSNSGETAELLEVLPHLKRRGTARIALVGKPDSSLARGSDVVLEASVDREVCPLNLAPT 169

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKI 235
            S  + +AIGDALA   +E RN S  DF   HP G LG  L + ASD+M     +  ++ 
Sbjct: 170 ASTAVAMAIGDALAAIWMERRNISPADFAFNHPAGSLGKQLTLTASDLMVPVAKVQPLQP 229

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFH----KDLNTLSVEDVM 289
              L D I  L++   G   V D      L G+IT+GD+ R       ++  +LS  D+M
Sbjct: 230 NTSLQDVICKLTQDGIGSGWVEDPSTAGLLLGLITDGDLRRALRDHSAENWASLSAADLM 289

Query: 290 IKNPKVILEDTLLTVA---MQLLRQHNISVLMVV 320
             +P  +  D L   A   M+  R+  ISVL VV
Sbjct: 290 TADPITVDADLLAVEAIKQMECNRRKPISVLPVV 323


>gi|15618437|ref|NP_224722.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae
           CWL029]
 gi|15836057|ref|NP_300581.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae J138]
 gi|16752515|ref|NP_444777.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydophila
           pneumoniae AR39]
 gi|33241878|ref|NP_876819.1| KpsF [Chlamydophila pneumoniae TW-183]
 gi|7388417|sp|Q9Z826|Y526_CHLPN RecName: Full=Uncharacterized protein
           CPn_0526/CP_0226/CPj0526/CpB0547
 gi|4376815|gb|AAD18666.1| GutQ/KpsF Family Sugar-P Isomerase [Chlamydophila pneumoniae
           CWL029]
 gi|7189153|gb|AAF38092.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pneumoniae
           AR39]
 gi|8978897|dbj|BAA98732.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae J138]
 gi|33236388|gb|AAP98476.1| KpsF [Chlamydophila pneumoniae TW-183]
          Length = 329

 Score =  145 bits (367), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 155/291 (53%), Gaps = 7/291 (2%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           EKI    G V  +G+GKSG +  KL +TL S    + F    +  HGDLG+++  D++ +
Sbjct: 39  EKILGHSGWVFFSGVGKSGCVARKLVATLQSLSERALFFSPVDLLHGDLGLVSPGDIVCL 98

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            S SG + EL   + + +     L+AITS   S +A  +D+V+ LP   E  P  L PT 
Sbjct: 99  FSKSGETQELLDTVPHLKSRRAILVAITSMPYSNLAALSDLVVILPSVAELDPFNLIPTN 158

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIG 236
           S   Q+  GD LA+ L  SR  S + +   HP G++G        D M     +P   +G
Sbjct: 159 STTCQMIFGDFLAMLLFHSRGVSLSTYGKNHPSGQVGMKANGKVKDFMFPKTEVPFCHLG 218

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNP 293
             +  ++ + S    GCV +VD   +L GI T+GD+ R   ++  ++ +LS+E VM  NP
Sbjct: 219 DKVSFSLEVFSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMTANP 278

Query: 294 KVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
           + I ED+ + +A+QL+   + ++VL V+D+ +     G++H   L + G++
Sbjct: 279 RCITEDSDIAIALQLMESSSPVAVLPVLDNEENRHVTGLLHMHTLAKAGLL 329


>gi|254431317|ref|ZP_05045020.1| polysialic acid capsule synthesis protein KpsF [Cyanobium sp. PCC
           7001]
 gi|197625770|gb|EDY38329.1| polysialic acid capsule synthesis protein KpsF [Cyanobium sp. PCC
           7001]
          Length = 344

 Score =  145 bits (367), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 165/299 (55%), Gaps = 16/299 (5%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           +E  +  + ++V+TG+GKSG +  K+A+T +S G  + F++  +A HGDLG++  DD+ +
Sbjct: 37  LESCRQRRAKLVVTGVGKSGIVARKIAATFSSIGLTAVFLNPVDALHGDLGIVAADDVTL 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG ++EL AIL + +R     IA+    +S +A   D+VL    + E CP  LAPT
Sbjct: 97  LLSNSGETEELLAILPHLKRRGTSRIALVGRVESSLARGCDLVLDAAVDREVCPLNLAPT 156

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVM-HSGDSIPL-V 233
            S  + +AIGDALA   +E    S  DF + HP G LG  L +   D+M  +G+  PL  
Sbjct: 157 ASTAVAMAIGDALAAVWMERAGISPVDFAINHPAGSLGRRLTLTVGDLMVPAGEIEPLHP 216

Query: 234 KIGCPLIDA-ITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHK----DLNTLSV 285
           +   P++ A +T  S  R    A    G    +L G+IT+GD+ R   +    D + ++ 
Sbjct: 217 EARLPVVIAHLTQGSPGRGSLGASWVHGSDPSQLAGLITDGDLRRTLQRHGPGDWDRITA 276

Query: 286 EDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVV--DDCQKAIGIVHFLDLLRFG 339
            ++   +P  +  D L   A++L+   R+  ISV+ VV  DD ++  G++   DL++ G
Sbjct: 277 AEMATTDPITVTPDVLAAEALELMERNRRQAISVMPVVSPDDPRRLEGLLRLHDLVQAG 335


>gi|227509706|ref|ZP_03939755.1| possible arabinose-5-phosphate isomerase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227190856|gb|EEI70923.1| possible arabinose-5-phosphate isomerase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 317

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 160/311 (51%), Gaps = 13/311 (4%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           +EK+ L  +   L       F   V  I    GRV+  GIGKS  I  K++++L+S G  
Sbjct: 13  SEKQALDEVSQRLDE----HFDDLVNMINETTGRVIFIGIGKSEIIAEKISASLSSIGQS 68

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENK 149
           SF + AA A HGDLG + ++D ++++S SG + E+   L+  +      I  +A+T    
Sbjct: 69  SFTIDAATAFHGDLGRLAKNDTVLLVSNSGETQEVVQTLFAMKTIFPNGISTVALTGNPN 128

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A + D+V+ L  + E+   GLAPT+S    L +GDAL +AL + R+F +  F   HP
Sbjct: 129 STLAKNTDLVINLSVKKEADVTGLAPTSSTTATLVLGDALLVALEKIRSFDKKQFAQYHP 188

Query: 210 GGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGII 267
           GG +G + +     VMH+   IP V+    + D I  +S    G   V D E  ++ GI+
Sbjct: 189 GGSIGKMLLQQVKHVMHT--KIPYVEEDTKINDVIYTISNFGLGITLVRDIETNQITGIV 246

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GDI + F     +   +  D M +    I ++     A +++   NIS L+V D+   
Sbjct: 247 TDGDIRKKFLDVPAVKRSTARDYMTRGFVSINQEKRNRDAWRMMASRNISNLIVRDNDDH 306

Query: 326 AIGIVHFLDLL 336
            +G++   D+L
Sbjct: 307 VVGVITIHDVL 317


>gi|229553513|ref|ZP_04442238.1| phosphosugar isomerase [Lactobacillus rhamnosus LMS2-1]
 gi|229313138|gb|EEN79111.1| phosphosugar isomerase [Lactobacillus rhamnosus LMS2-1]
          Length = 203

 Score =  145 bits (365), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 106/163 (65%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+   ++KI  + GR+V  G+GK+GHIG KLA+T AS GTP+ FVHA EA HG++GMIT 
Sbjct: 31  QYCSVIDKIMHLTGRLVFMGVGKTGHIGVKLAATFASLGTPAIFVHATEAMHGNMGMITS 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL+I++S SG + E  A L   +R     +A T ++ S +A   + VLT+P   E+   
Sbjct: 91  EDLVILISNSGETKETLAPLPSLKRIGAATVAFTGQDDSHLAQACESVLTIPVTHEADDL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           GLAPT+S+   L +GDALA  +   + F+ +DF + HPGG LG
Sbjct: 151 GLAPTSSSTAALMVGDALACTISRLKGFTASDFALYHPGGALG 193


>gi|269303402|gb|ACZ33502.1| sugar isomerase, KpsF/GutQ family [Chlamydophila pneumoniae LPCoLN]
          Length = 329

 Score =  144 bits (364), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 155/291 (53%), Gaps = 7/291 (2%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           EKI    G V  +G+GKSG +  KL +TL S    + F    +  HGDLG+++  D++ +
Sbjct: 39  EKILGHSGWVFFSGVGKSGCVARKLVATLQSLSERALFFSPVDLLHGDLGLVSPGDIVCL 98

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            S SG + EL   + + +     L+AITS   S +A  +D+V+ LP   E  P  L PT 
Sbjct: 99  FSKSGETQELLDTVPHLKSRGAILVAITSMPYSNLAALSDLVVILPSVAELDPFNLIPTN 158

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIG 236
           S   Q+  GD LA+ L  SR  S + +   HP G++G        D M     +P   +G
Sbjct: 159 STTCQMIFGDFLAMLLFHSRGVSLSTYGKNHPSGQVGMKANGKVKDFMFPKTEVPFCHLG 218

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNP 293
             +  ++ + S    GCV +VD   +L GI T+GD+ R   ++  ++ +LS++ VM  NP
Sbjct: 219 DKVSFSLEVFSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLDKVMTANP 278

Query: 294 KVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
           + I ED+ + +A+QL+   + ++VL V+D+ +     G++H   L + G++
Sbjct: 279 RCITEDSDIAIALQLMESSSPVAVLPVLDNEENRHVTGLLHMHTLAKAGLL 329


>gi|33864177|ref|NP_895737.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635761|emb|CAE22086.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9313]
          Length = 347

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 151/274 (55%), Gaps = 10/274 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           +E+    + ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDLG++ ++D+ +
Sbjct: 50  LERCSDQRAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAMHGDLGVVAQEDVCL 109

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG + EL  +L + +R     IA+  +  S +A  +D+VL    + E CP  LAPT
Sbjct: 110 LLSNSGETAELLEVLPHLKRRGTARIALVGKPDSSLARGSDVVLEASVDREVCPLNLAPT 169

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKI 235
            S  + +AIGDALA   +E RN S  DF   HP G LG  L + ASD+M   + +  ++ 
Sbjct: 170 ASTAVAMAIGDALAAIWMERRNISPADFAFNHPAGSLGKQLTLTASDLMVPVEKVQPLQP 229

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFH----KDLNTLSVEDVM 289
              L + I  L++   G   V D      L G+IT+GD+ R       ++  +LS  ++M
Sbjct: 230 NTSLQEVICKLTQDGIGSGWVEDPSTAGLLLGLITDGDLRRALRDHSAENWASLSAAELM 289

Query: 290 IKNPKVILEDTLLTVA---MQLLRQHNISVLMVV 320
             +P  +  D L   A   M+  R+  ISVL VV
Sbjct: 290 TADPITVDADLLAVEAIKQMECNRRKPISVLPVV 323


>gi|167771928|ref|ZP_02443981.1| hypothetical protein ANACOL_03301 [Anaerotruncus colihominis DSM
           17241]
 gi|167665726|gb|EDS09856.1| hypothetical protein ANACOL_03301 [Anaerotruncus colihominis DSM
           17241]
          Length = 209

 Score =  144 bits (363), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 73/155 (47%), Positives = 102/155 (65%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KGRV++TG+GK+GHIG K+A+T+AS G P+FFVH+ E  HGD+GMIT+DDL+I++S SG 
Sbjct: 46  KGRVIVTGLGKTGHIGKKIAATMASLGIPAFFVHSCETLHGDMGMITKDDLVIMISNSGK 105

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S E+  +L   +      I+IT +  S +A   DI +     PE    GLAPT S+   L
Sbjct: 106 SSEILNMLAPLKIIGAKTISITKDKHSPLAEATDIKILCDAGPEIDHMGLAPTASSTGAL 165

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
           AIGDALA  + + R F++ +F + HPGG LG   +
Sbjct: 166 AIGDALATVVCKMRGFTKQNFALSHPGGALGQQLI 200


>gi|191171224|ref|ZP_03032774.1| sugar isomerase, KpsF/GutQ family [Escherichia coli F11]
 gi|300995852|ref|ZP_07181284.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|190908524|gb|EDV68113.1| sugar isomerase, KpsF/GutQ family [Escherichia coli F11]
 gi|300304707|gb|EFJ59227.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|324011674|gb|EGB80893.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 60-1]
          Length = 198

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 1/177 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L ++E  +   LS +F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH
Sbjct: 18  LKAVEEVIDSPLS-EFANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVH 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A   D
Sbjct: 77  GTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 137 LSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|110642980|ref|YP_670710.1| posphosugar isomerase [Escherichia coli 536]
 gi|110344572|gb|ABG70809.1| hypothetical posphosugar isomerase [Escherichia coli 536]
          Length = 198

 Score =  144 bits (362), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 1/177 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L ++E  +   LS +F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH
Sbjct: 18  LKAVEEVIDSPLS-EFANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVH 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A   D
Sbjct: 77  GTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTCSHHSSLAISCD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 137 LSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|26249241|ref|NP_755281.1| phosphosugar isomerase [Escherichia coli CFT073]
 gi|227888376|ref|ZP_04006181.1| phosphosugar isomerase [Escherichia coli 83972]
 gi|300980543|ref|ZP_07175069.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|301049395|ref|ZP_07196359.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|26109648|gb|AAN81851.1|AE016765_253 Phosphosugar isomerase [Escherichia coli CFT073]
 gi|222034527|emb|CAP77269.1| Phosphosugar isomerase [Escherichia coli LF82]
 gi|227834645|gb|EEJ45111.1| phosphosugar isomerase [Escherichia coli 83972]
 gi|300298837|gb|EFJ55222.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|300409243|gb|EFJ92781.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|307554806|gb|ADN47581.1| sugar isomerase [Escherichia coli ABU 83972]
 gi|312947364|gb|ADR28191.1| putative phosphosugar isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315293816|gb|EFU53168.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 153-1]
          Length = 198

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 1/177 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L ++E  +   LS +F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH
Sbjct: 18  LKAVEEVIDSPLS-EFANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVH 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A   D
Sbjct: 77  GTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 137 LSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|33864723|ref|NP_896282.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 8102]
 gi|33632246|emb|CAE06702.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 8102]
          Length = 339

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 156/284 (54%), Gaps = 20/284 (7%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           +E+    K ++VITG+GKSG +  K+A+T +S G  + F++  +A HGDLG++  +D+ +
Sbjct: 45  LERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALFLNPLDALHGDLGVVAPEDVCL 104

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +LS SG ++EL  +L + +R     IAI     S +A  +D+VL    + E CP  LAPT
Sbjct: 105 LLSNSGETEELLEVLPHLKRRGTGRIAIVGRADSSLARGSDVVLEAGVDREVCPLNLAPT 164

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKI 235
            S  + +AIGDALA   +E R  S  DF + HP G LG  L + A+D+M     +P+ K+
Sbjct: 165 ASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTLTAADLM-----VPVSKL 219

Query: 236 -----GCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFH----KDLNTLS 284
                  PL + I  L+    G   V    Q   L G++T+GD+ R          ++L+
Sbjct: 220 HPLHPHTPLPEVIGGLTRDGIGSGWVEHPEQPGSLVGLLTDGDLRRALQDHSADSWSSLT 279

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQK 325
             D+M ++P  +  D L+  A++ +   R+  ISVL VV + ++
Sbjct: 280 AADLMTRDPITVNGDVLVVKALEQMEHNRRKPISVLPVVGEQKR 323


>gi|91212207|ref|YP_542193.1| phosphosugar isomerase [Escherichia coli UTI89]
 gi|117625066|ref|YP_854054.1| phosphosugar isomerase [Escherichia coli APEC O1]
 gi|218559825|ref|YP_002392738.1| phosphosugar isomerase [Escherichia coli S88]
 gi|237706527|ref|ZP_04537008.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|91073781|gb|ABE08662.1| phosphosugar isomerase [Escherichia coli UTI89]
 gi|115514190|gb|ABJ02265.1| phosphosugar isomerase [Escherichia coli APEC O1]
 gi|218366594|emb|CAR04348.1| putative phosphosugar isomerase [Escherichia coli S88]
 gi|226899567|gb|EEH85826.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|294492890|gb|ADE91646.1| phosphosugar isomerase [Escherichia coli IHE3034]
 gi|307625593|gb|ADN69897.1| putative phosphosugar isomerase [Escherichia coli UM146]
 gi|315289355|gb|EFU48750.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 110-3]
 gi|323951729|gb|EGB47604.1| SIS domain-containing protein [Escherichia coli H252]
 gi|323957251|gb|EGB52974.1| SIS domain-containing protein [Escherichia coli H263]
          Length = 198

 Score =  143 bits (361), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/177 (42%), Positives = 116/177 (65%), Gaps = 1/177 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L ++E  +   LS +F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH
Sbjct: 18  LKAVEEVIYSPLS-EFANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVH 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A   D
Sbjct: 77  GTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCD 136

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 137 LSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|237798604|ref|ZP_04587065.1| KpsF/GutQ [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021457|gb|EGI01514.1| KpsF/GutQ [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 159

 Score =  143 bits (361), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/155 (50%), Positives = 104/155 (67%), Gaps = 4/155 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G+K+A
Sbjct: 8   IHSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVGNKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I+
Sbjct: 64  ATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMIS 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           +T +  S++A  ADI L      E+CP  LAPT+S
Sbjct: 124 LTGDPDSILAKAADINLNAHVAHEACPLNLAPTSS 158


>gi|331684455|ref|ZP_08385047.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           H299]
 gi|323978574|gb|EGB73656.1| SIS domain-containing protein [Escherichia coli TW10509]
 gi|331078070|gb|EGI49276.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           H299]
          Length = 198

 Score =  142 bits (359), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 108/158 (68%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  ++S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETTEILATLPSLKKMGNYLISFTRSHRSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|301027514|ref|ZP_07190851.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
 gi|300395022|gb|EFJ78560.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
          Length = 198

 Score =  142 bits (359), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 72/158 (45%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   +R    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKRMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|258538655|ref|YP_003173154.1| phosphosugar isomerase [Lactobacillus rhamnosus Lc 705]
 gi|257150331|emb|CAR89303.1| Phosphosugar isomerase [Lactobacillus rhamnosus Lc 705]
          Length = 203

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 105/163 (64%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+   ++KI  + GR+V  G+GK+GHIG KLA+T AS GTP+ FVHA EA HGD+GMIT 
Sbjct: 31  QYCSVIDKIMHLTGRLVFMGVGKTGHIGVKLAATFASLGTPAIFVHATEAMHGDMGMITS 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL+I++S SG + E  A L   +R     +A T ++ S +A   + VLT+P   E+   
Sbjct: 91  EDLVILISNSGETKETLAPLPSLKRIGAATVAFTGQDDSHLAQACESVLTIPVTHEADDL 150

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           GLAPT+S+   L +GDALA  +   + F+ +DF + H GG LG
Sbjct: 151 GLAPTSSSTAALMVGDALACTISRLKGFTASDFALYHLGGALG 193


>gi|313900882|ref|ZP_07834372.1| sugar isomerase, KpsF/GutQ family [Clostridium sp. HGF2]
 gi|312954302|gb|EFR35980.1| sugar isomerase, KpsF/GutQ family [Clostridium sp. HGF2]
          Length = 197

 Score =  142 bits (358), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/188 (41%), Positives = 114/188 (60%), Gaps = 6/188 (3%)

Query: 28  LRSIIAEKRGLSSLES-SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           + +I  EK  L +L + SLQ     +    +  I+  KG+VV  G+GKS HIG+KLA+T 
Sbjct: 6   IEAIEREKTALDALSAMSLQ-----ECERVMAAIEECKGKVVFCGVGKSAHIGAKLAATF 60

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           AS G PSFFVHA E+ HGDLGMI   D++I++S SG++ E+  +L          +A  +
Sbjct: 61  ASLGIPSFFVHATESVHGDLGMIEEKDIVILISNSGTTQEVIQVLTPLHSIGCMTVACCA 120

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A   D+ L  PK  E+  + LAPT+S  + L +GDA+A A+ + R F+ +DF+ 
Sbjct: 121 NRDSILAKACDLTLIYPKVTEADAYNLAPTSSTTLVLVLGDAIACAISKKRGFNPSDFHK 180

Query: 207 LHPGGKLG 214
            HPGG LG
Sbjct: 181 FHPGGSLG 188


>gi|332971437|gb|EGK10392.1| arabinose 5-phosphate isomerase [Kingella kingae ATCC 23330]
          Length = 221

 Score =  142 bits (358), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 126/213 (59%), Gaps = 3/213 (1%)

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           +  +R +  LI ITS+ +S +A HADI +      E+CP GLAPT+S    LA+GDALAI
Sbjct: 9   HQLKRKNTTLICITSKPQSSMAKHADIHIQAAVSQEACPLGLAPTSSTTAVLALGDALAI 68

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL++R F+  DF + HP G LG  L +   ++MHS   +P V+    L  AI  +SEK 
Sbjct: 69  VLLKARQFTSEDFALNHPAGSLGRRLLLTVGNLMHSDSELPAVEEHTLLKTAIVKMSEKG 128

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +A+VD    LKGI+T+GD+ R F K      L+V DVM  +P  I  + L + A++ 
Sbjct: 129 LGMLAIVDASGCLKGILTDGDLRRLFEKRDTFAGLTVNDVMHVSPHSITPEKLASEAVKF 188

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++   +S L+V D+  K +G ++  DLL+  ++
Sbjct: 189 MQDKRVSGLLVCDEAGKLVGALNMHDLLKARVV 221


>gi|323966793|gb|EGB62224.1| SIS domain-containing protein [Escherichia coli M863]
 gi|327251556|gb|EGE63242.1| SIS domain protein [Escherichia coli STEC_7v]
          Length = 198

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 108/158 (68%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  ++S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETTEILATLPSLKKMGNYLISFTRSHRSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTCADFGLYHPGGALG 193


>gi|148241383|ref|YP_001226540.1| polysialic acid capsule expression protein [Synechococcus sp.
           RCC307]
 gi|147849693|emb|CAK27187.1| Polysialic acid capsule expression protein [Synechococcus sp.
           RCC307]
          Length = 341

 Score =  141 bits (356), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/305 (32%), Positives = 163/305 (53%), Gaps = 15/305 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
           +  L    HC+ +  K     +V+TG+GKSG +  K+A+T  S G  + +++  +A HGD
Sbjct: 28  EAALDLLQHCSEQGAK-----LVVTGVGKSGIVARKIAATFTSIGLMALYLNPLDALHGD 82

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           LG++  +D++++LS SG S EL A+L +  R     IA+T    S +A  A +VL    +
Sbjct: 83  LGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIALTGRLDSSLARGAQVVLDGSVD 142

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVM 224
            E CP  LAPT S  + +AIGDALA   ++ +  ++ DF V HP G LG  L +  +D+M
Sbjct: 143 REVCPLNLAPTASTAVAMAIGDALAAVWMQRQGITQADFAVNHPAGSLGRQLTLSVADLM 202

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAV--VDEGQKLKGIITEGDIFRNFH----K 278
              D+ P +     L + +  L+    G   V   D+ ++L G+IT+GD+ R       +
Sbjct: 203 VPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQPKRLLGLITDGDLRRALRTHSPQ 262

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLDL 335
              ++   D+M  +P     D L   A++L+   R+ +ISVL V     + +G++   DL
Sbjct: 263 AWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKSISVLPVQAVSGELVGLLRLHDL 322

Query: 336 LRFGI 340
           ++ G+
Sbjct: 323 VQAGL 327


>gi|215488132|ref|YP_002330563.1| phosphosugar isomerase [Escherichia coli O127:H6 str. E2348/69]
 gi|306812283|ref|ZP_07446481.1| phosphosugar isomerase [Escherichia coli NC101]
 gi|331648573|ref|ZP_08349661.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
 gi|215266204|emb|CAS10630.1| phosphosugar isomerase [Escherichia coli O127:H6 str. E2348/69]
 gi|281179838|dbj|BAI56168.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|305854321|gb|EFM54759.1| phosphosugar isomerase [Escherichia coli NC101]
 gi|315295767|gb|EFU55084.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 16-3]
 gi|330908866|gb|EGH37380.1| arabinose 5-phosphate isomerase [Escherichia coli AA86]
 gi|331042320|gb|EGI14462.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
          Length = 198

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|170680141|ref|YP_001744980.1| KpsF/GutQ family sugar isomerase [Escherichia coli SMS-3-5]
 gi|170517859|gb|ACB16037.1| sugar isomerase, KpsF/GutQ family [Escherichia coli SMS-3-5]
          Length = 198

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|300936264|ref|ZP_07151197.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
 gi|300458589|gb|EFK22082.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
          Length = 198

 Score =  141 bits (355), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|260856925|ref|YP_003230816.1| putative isomerase [Escherichia coli O26:H11 str. 11368]
 gi|257755574|dbj|BAI27076.1| predicted isomerase [Escherichia coli O26:H11 str. 11368]
 gi|323154862|gb|EFZ41055.1| SIS domain protein [Escherichia coli EPECa14]
 gi|323183357|gb|EFZ68754.1| SIS domain protein [Escherichia coli 1357]
          Length = 198

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKILQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|301165950|emb|CBW25523.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 337

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 147/281 (52%), Gaps = 7/281 (2%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G +V  G+GKSG IG+KLAST  S G  SF +H  EA HGDLG +   D+I+ LS SG++
Sbjct: 55  GDIVFCGVGKSGLIGAKLASTFTSLGLRSFLLHPTEALHGDLGRVRESDVIVFLSKSGTT 114

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           +E+  IL + +      I +     S +     +V     E E+C +  APTTS+ + LA
Sbjct: 115 EEILKILPFLKVKKENRIGLLGAVDSPIGKECAVVFDCSVEKEACINNQAPTTSSTVSLA 174

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+      N S+  F   HPGG LG +L +   D+M       +V     L D I
Sbjct: 175 MGDALAVLFEHIVNLSKEGFAENHPGGFLGKSLRMKVQDLMSHKKDCAVVDSKATLKDVI 234

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTL 301
             ++++  G  AV+D   K  G+I EGDI R        L  SV +++   P  +   TL
Sbjct: 235 LEMTQRPLGACAVID-NNKFVGLIVEGDIRRCLSTGDGNLQVSVTNILNAKPSTVSRATL 293

Query: 302 LTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              A+ L+  R+  ++V+ VV+  +   G++   DLL+ G+
Sbjct: 294 AFDALGLMENRERPLNVVPVVEGSE-FYGLIRLHDLLKAGL 333


>gi|218690939|ref|YP_002399151.1| putative phosphosugar isomerase [Escherichia coli ED1a]
 gi|218428503|emb|CAR09429.2| putative phosphosugar isomerase [Escherichia coli ED1a]
          Length = 198

 Score =  140 bits (354), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 71/158 (44%), Positives = 107/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKILQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|87301993|ref|ZP_01084827.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 5701]
 gi|87283561|gb|EAQ75516.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 5701]
          Length = 332

 Score =  140 bits (352), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/287 (32%), Positives = 151/287 (52%), Gaps = 10/287 (3%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           + ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDLG++  +D++++LS SG 
Sbjct: 41  RAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHGDLGVVAPEDVVLLLSNSGE 100

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + EL  IL + RR     IA+     S +A   ++VL    + E CP  LAPT S  + +
Sbjct: 101 TQELLEILPHLRRRGTGRIALVGRVASSLARGCEVVLDGSVDREVCPLNLAPTASTAVAM 160

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           AIGDALA   +E R  S  DF + HP G LG  L +   D+M     +  ++ G  L + 
Sbjct: 161 AIGDALAAVWMERRGISPADFALNHPAGALGKQLTLTVGDLMVPTAKLHPLEEGASLSEV 220

Query: 243 ITILSEKRFGCVAV--VDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVI 296
           I  L+    G   V   D    L G+IT+GD+ R   +        L   D+M  +P  +
Sbjct: 221 IAGLTGDGVGACWVRRADNDSLLAGLITDGDLRRALEQHAPAAWGELRATDLMTIDPITV 280

Query: 297 LEDTLLTVAMQLL---RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             D L   A++ +   R+  I VL V+ +    +G++   DL++ G+
Sbjct: 281 AADLLAVEALERMERNRRKPIGVLPVLGEGGPMLGLLRLHDLVQAGL 327


>gi|331658960|ref|ZP_08359902.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331053542|gb|EGI25571.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
          Length = 155

 Score =  138 bits (348), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 71/150 (47%), Positives = 101/150 (67%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG +
Sbjct: 1   GKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGET 60

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L 
Sbjct: 61  AEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLV 120

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 121 VGDAVALALSELKKFTRADFGLYHPGGALG 150


>gi|260869493|ref|YP_003235895.1| putative isomerase [Escherichia coli O111:H- str. 11128]
 gi|257765849|dbj|BAI37344.1| predicted isomerase [Escherichia coli O111:H- str. 11128]
 gi|323180248|gb|EFZ65800.1| SIS domain protein [Escherichia coli 1180]
          Length = 198

 Score =  137 bits (345), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 70/158 (44%), Positives = 106/158 (67%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKILQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+A+AL E + F+   F + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVALALSELKKFTRAYFGLYHPGGALG 193


>gi|330863202|emb|CBX73329.1| protein gutQ [Yersinia enterocolitica W22703]
          Length = 236

 Score =  135 bits (341), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 2/235 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 1   MIGSQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGLESPLAQGAACVLDISVEHE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG   +     +M +
Sbjct: 61  ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLINRVHHLMRT 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VA+ D  QK+ G+ T+GD+ R   K        
Sbjct: 121 GDRLPVVNESDSVMEAMLELSRTGLGLVAICDPNQKVVGVFTDGDLRRWLVKGGTLQQQL 180

Query: 287 DVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L E      A++ L QH+IS   VVD   K +G ++  DL + G+
Sbjct: 181 GGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLDGKLVGAINLHDLHQAGV 235


>gi|330444236|ref|YP_004377222.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pecorum
           E58]
 gi|328807346|gb|AEB41519.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pecorum
           E58]
          Length = 329

 Score =  134 bits (338), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 155/291 (53%), Gaps = 7/291 (2%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           E+I    G +  +G+GKSG++  K+ +TL S    + F+   +  HGD+G++   D++ +
Sbjct: 39  ERILHHSGWIFFSGVGKSGYVARKIVATLQSLSERALFLSHGDLLHGDIGVVQEGDIVCL 98

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            S SG + EL   L Y +   + L+AITS   S +A  AD V+ LP  PE  P  L PTT
Sbjct: 99  FSKSGETQELLDSLPYLKTRGVTLVAITSSPYSSLAISADFVVVLPVVPELDPFDLIPTT 158

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIG 236
           S   Q+  GD LA+ LL+ R  + + +   HP GK+G        D M     +P     
Sbjct: 159 STTCQMLFGDLLAMMLLQGRGVTLSTYGENHPSGKIGLKAKGRVRDYMFPKTEVPFCAPE 218

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNP 293
             + D + I S    GCV VV    +L GI T+GD+ R   ++  ++ +L++++VM   P
Sbjct: 219 DTVHDTLEIFSSYGCGCVCVVTPNYELLGIFTDGDLRRALAHYGGEVLSLALKEVMTARP 278

Query: 294 KVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
           +V+  +  +T A+Q++   N I+ L VV++  +   +G++H   L + G++
Sbjct: 279 RVVEREADVTTALQIMEARNPITALPVVNNITQNSVVGLLHVHTLAKAGLL 329


>gi|213024486|ref|ZP_03338933.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 162

 Score =  132 bits (333), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 72/154 (46%), Positives = 102/154 (66%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 9   SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 68

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +
Sbjct: 69  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDI 128

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             E E+CP  LAPT+S +  L +GDALA+A++++
Sbjct: 129 SVEREACPMHLAPTSSTVNTLMMGDALAMAVMQA 162


>gi|213418627|ref|ZP_03351693.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 236

 Score =  131 bits (330), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHLMRQ 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
           GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R        T  V
Sbjct: 121 GDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 SEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|284033393|ref|YP_003383324.1| Arabinose-5-phosphate isomerase [Kribbella flavida DSM 17836]
 gi|283812686|gb|ADB34525.1| Arabinose-5-phosphate isomerase [Kribbella flavida DSM 17836]
          Length = 278

 Score =  127 bits (318), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/206 (38%), Positives = 114/206 (55%), Gaps = 16/206 (7%)

Query: 36  RGLSSLESSLQGE----------LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           RGL++  S+++ E          L   F   +  +   +G +V+TG+GKSG +G K+A+T
Sbjct: 79  RGLAAARSAIETEAAAVSALADRLDGVFLDVLTAVAGCQGHLVVTGLGKSGLVGRKIAAT 138

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ F+HA +A HGD G +T  DL++ LS SG + E+ A        SIP+IA+T
Sbjct: 139 LASTGTPATFIHAGDALHGDSGAVTSRDLVLALSASGETAEVCAFARMLAERSIPVIAMT 198

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A   L      E+ P  LAPT S    L +GDALA AL+  R F+ +DF 
Sbjct: 199 GAEHSTLAQLATYTLDTMVLREADPLNLAPTASTTAALVMGDALACALVVLREFTHHDFA 258

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIP 231
             HP G LG      + ++ SG+  P
Sbjct: 259 RFHPSGTLG------ARLLGSGEQAP 278


>gi|332755584|gb|EGJ85947.1| arabinose 5-phosphate isomerase [Shigella flexneri 2747-71]
          Length = 236

 Score =  127 bits (318), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRR 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
            D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R        T  V
Sbjct: 121 DDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 NEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|323935737|gb|EGB32051.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1520]
          Length = 236

 Score =  126 bits (317), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRR 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
            D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R        T  V
Sbjct: 121 DDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 NEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|328477216|gb|EGF47413.1| phosphosugar isomerase [Lactobacillus rhamnosus MTCC 5462]
          Length = 175

 Score =  125 bits (315), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/139 (47%), Positives = 92/139 (66%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+   ++KI  + GR+V  G+GK+GHIG KLA+T AS GTP+ FVHA EA HGD+GMIT 
Sbjct: 31  QYCSVIDKIMHLTGRLVFMGVGKTGHIGVKLAATFASLGTPAIFVHATEAMHGDMGMITS 90

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL+I++S SG + E  A L   +R     +A T ++ S +A   + VLT+P   E+   
Sbjct: 91  EDLVILISNSGETKETLAPLPSLKRIGAATVAFTGQDDSHLAQACESVLTIPVTHEADDL 150

Query: 172 GLAPTTSAIMQLAIGDALA 190
           GLAPT+S+   L +GDALA
Sbjct: 151 GLAPTSSSTAALMVGDALA 169


>gi|297744159|emb|CBI37129.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score =  125 bits (314), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 48/317 (15%)

Query: 38  LSSLESSLQGELSFQFH--------CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L +L  + Q  L+F FH           + +  I+G +  TG+GKSG +  K++ TL   
Sbjct: 22  LMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTIFFTGVGKSGFVAQKISQTL--- 78

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
                                          SG+S+EL  +   A+     LI++TS   
Sbjct: 79  -------------------------------SGNSEELLKLAPCAKAKGAYLISVTSTED 107

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           +++    D+ + LP E E CP  LAP TS  +Q+  GD +A+AL+ +RN + +++   HP
Sbjct: 108 NLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVFGDTVAVALMGARNLTRDEYAANHP 167

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G++G +L     DVM   D +P+ K G  ++D +  L+ K  GC+ V+D+  +L G  T
Sbjct: 168 AGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFT 227

Query: 269 EGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMVVDDC 323
           +GD+ R      + +  L+V  +  +NP+ I  + +   AM+ +      +  L V+DD 
Sbjct: 228 DGDLRRTLKASGEGIFKLTVGQMCNRNPRTISSNVMAVDAMRRMEAPPSPVQFLPVLDDQ 287

Query: 324 QKAIGIVHFLDLLRFGI 340
              IGIV    L+  G+
Sbjct: 288 NVLIGIVTLHGLVSAGL 304


>gi|125580879|gb|EAZ21810.1| hypothetical protein OsJ_05449 [Oryza sativa Japonica Group]
          Length = 313

 Score =  125 bits (313), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/285 (31%), Positives = 136/285 (47%), Gaps = 39/285 (13%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G V  TG+GKSG +  KLA TLAS                                SG+S
Sbjct: 59  GAVFFTGVGKSGIVARKLAQTLAS------------------------------PRSGAS 88

Query: 125 DELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           DEL A+   AR     LI++TS        +A   D+ + LP + E CP GLAP TS  +
Sbjct: 89  DELLALAPCARAKGAHLISLTSAASGADCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAI 148

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLI 240
           Q+  GD +  A++E+R  S + +   HP GK+G +L     DVM   + +PL K G  ++
Sbjct: 149 QMVFGDTVVAAIMEARRLSRDQYASNHPAGKIGKSLIFKVKDVMKKQNELPLCKEGDMIM 208

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVIL 297
           D +T L+ K  GC+ VVD+   L G  T+GD+ R      + +  L+V ++  ++P+ I 
Sbjct: 209 DQLTELTSKGCGCLLVVDDEYHLIGTFTDGDLRRTLKASGQAIFNLTVGEMCNRHPRTIT 268

Query: 298 EDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            D +   AM+ +      +  L VVD      GI+    L+  G+
Sbjct: 269 ADAMAVQAMEKMESPPSPVQFLPVVDSNNVVCGIITLHGLVSAGL 313


>gi|312964913|ref|ZP_07779153.1| SIS domain protein [Escherichia coli 2362-75]
 gi|312290469|gb|EFR18349.1| SIS domain protein [Escherichia coli 2362-75]
          Length = 198

 Score =  124 bits (312), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/158 (43%), Positives = 105/158 (66%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV   +GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKVLQSCQGKVVFIDVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPS 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S+ + L +GDA+ +AL E + F+  DF + HPGG LG
Sbjct: 156 CSSTVVLVVGDAVVLALSELKKFTRADFGLYHPGGALG 193


>gi|229820196|ref|YP_002881722.1| Arabinose-5-phosphate isomerase [Beutenbergia cavernae DSM 12333]
 gi|229566109|gb|ACQ79960.1| Arabinose-5-phosphate isomerase [Beutenbergia cavernae DSM 12333]
          Length = 205

 Score =  120 bits (302), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/168 (44%), Positives = 105/168 (62%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           G  S     A   I+A  GR++++G+GKSGHI +K+A+T ASTGTP+ FVHA EA HGD 
Sbjct: 31  GRSSEALLAATRLIEARSGRLIVSGLGKSGHIAAKMAATFASTGTPAHFVHATEALHGDS 90

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GM+   D+ I++S SG++ E+       R   +P+IA+  +  S +A  A + L +  E 
Sbjct: 91  GMVVPGDVAILISNSGTTAEVVQFGRMIRALGVPVIAMARDASSPLASLAQVWLDISVER 150

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           E+ P GLAPT S  + LA+GDALA AL+   NF +  F + HPGG LG
Sbjct: 151 EADPLGLAPTASTTLTLALGDALAAALMTRTNFDDAAFGLRHPGGALG 198


>gi|227512653|ref|ZP_03942702.1| possible arabinose-5-phosphate isomerase [Lactobacillus buchneri
           ATCC 11577]
 gi|227084118|gb|EEI19430.1| possible arabinose-5-phosphate isomerase [Lactobacillus buchneri
           ATCC 11577]
          Length = 280

 Score =  120 bits (301), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/280 (30%), Positives = 144/280 (51%), Gaps = 9/280 (3%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           K   +  GIGKS  I  K++++L+S G  SF + AA A HGDLG + ++D ++++S SG 
Sbjct: 3   KNPTIYIGIGKSEIIAEKISASLSSIGQSSFTIDAATAFHGDLGRLAKNDTVLLVSNSGE 62

Query: 124 SDELKAILYYARRF---SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           + E+   L+  +      I  +A+T    S +A + D+V+ L  + E+   G+AP +S  
Sbjct: 63  TQEVVQTLFAMKTIFPNGISTVALTGNPNSTLAKNTDLVINLSVKKEANVTGVAPISSTT 122

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPL 239
             L +GDAL +AL + R+F +  F   HPG  +G + +     VMH+   IP V+    +
Sbjct: 123 ATLVLGDALLVALEKIRSFDKKQFAQYHPGVSIGKMLLQQVKHVMHT--KIPYVEEDTKI 180

Query: 240 IDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI 296
            D I  +S    G   V D E  ++  ++T GDI + F     +   +  D M +    I
Sbjct: 181 NDVIYTISNLGLGITLVRDIETNQITRVVTYGDIRKKFLDVPAVKRSTARDYMTRFFVSI 240

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     A +++   NIS L+V D+    +G++   ++L
Sbjct: 241 NQEKRNRDAWRMMASRNISNLIVRDNDDHVVGVITIHNVL 280


>gi|296110305|ref|YP_003620686.1| putative isomerase [Leuconostoc kimchii IMSNU 11154]
 gi|295831836|gb|ADG39717.1| putative isomerase [Leuconostoc kimchii IMSNU 11154]
          Length = 245

 Score =  119 bits (298), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 126/243 (51%), Gaps = 8/243 (3%)

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENKSVVACHAD 157
           A HGDLG ++ DD+ I +S SG + E+   L+  +     S+  IA+T  ++S +A   D
Sbjct: 5   AYHGDLGRVSVDDVAIFISNSGETQEVIQTLFALKNIHQDSLKTIALTGSDESTLAKSTD 64

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           +VL +    E+ P  LAPT+S    L +GDAL IA+ ++  F   DF + HPGG +G + 
Sbjct: 65  LVLKIDVAEEADPTKLAPTSSTTATLVMGDALLIAIEKANEFKREDFALYHPGGSIGKML 124

Query: 218 VCASDVMHSGDS-IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +   +V HS  + IP VK   P+ D I  +S+   G   V      + GIIT+GDI + F
Sbjct: 125 L--RNVEHSMHTKIPYVKTTTPINDVIYRISDFGVGMTLVKTPEDTVIGIITDGDIRKKF 182

Query: 277 H--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                +   +  D M +    I +      A + +  +NIS L+V DD  K +GI+   D
Sbjct: 183 LYINQVKGSTASDYMTEGFITINKKARNNAAWKKMAANNISNLVVEDDNDKVVGIITIHD 242

Query: 335 LLR 337
           +L 
Sbjct: 243 VLE 245


>gi|260889982|ref|ZP_05901245.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
 gi|260860588|gb|EEX75088.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
          Length = 195

 Score =  118 bits (295), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 112/190 (58%), Gaps = 9/190 (4%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +A++ + +  E E+CP G AP +S    L  GDALA+ L++ ++F+ENDF   HPGG LG
Sbjct: 4   YAELTINVGVEKEACPLGQAPMSSTTATLVTGDALAVCLMKLKDFTENDFAKYHPGGSLG 63

Query: 215 T-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEG 270
             L +  SD+MH GD +P+VK    + + + +L++K+ G V + D   E  KL GIITEG
Sbjct: 64  KRLLLHVSDLMHIGDELPVVKEDEKIENVLMLLTKKKLGAVCISDTGLENGKLLGIITEG 123

Query: 271 DIFRNF-HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKA 326
           DI R   HK+        D+MI  P  I +D +   A+ L+  R+  I+VL VV++    
Sbjct: 124 DIRRALEHKEKFFDYVASDIMISTPVTIEKDAMALDALHLMENRKSQINVLPVVENGN-V 182

Query: 327 IGIVHFLDLL 336
           +G++   DL+
Sbjct: 183 VGLIRVHDLI 192


>gi|209967037|ref|YP_002299952.1| sugar isomerase, KpsF [Rhodospirillum centenum SW]
 gi|209960503|gb|ACJ01140.1| sugar isomerase, KpsF [Rhodospirillum centenum SW]
          Length = 330

 Score =  117 bits (293), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 98/315 (31%), Positives = 152/315 (48%), Gaps = 11/315 (3%)

Query: 31  IIAEKRGLSSLESS--LQGELSFQ--FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           IIA  R L  +E+   L  E S    F   V  I       ++ G+GKSG I   LAS L
Sbjct: 7   IIASARDLLHIEAKTVLAQEQSLDDGFLNVVNHIGTRDTNTLVAGVGKSGLIARLLASKL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           AS GT +++    +A HG+LG +  DDL+I+LS SG + EL  +   A +    + A+ S
Sbjct: 67  ASVGTRAWYYSTTDALHGELGGLRPDDLLILLSNSGQTRELVDLGRCAIQRGARVAAMVS 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S ++  AD  L +  E E+    L PT S    LA+GDAL IA+   R F+ +++  
Sbjct: 127 RVPSALSRIADWTLRVHVEREATETRL-PTASTAAMLALGDALVIAVARRRGFTVDEYAR 185

Query: 207 LHPGGKLGTLFVC-ASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            HPGG LG +     +D+M  +   + LV     +++ +  ++    G   VVD   +L 
Sbjct: 186 NHPGGTLGVVLGSRVADLMVKAPGGVALVTPETSVVETLLAMTRHPNGAALVVDADGRLA 245

Query: 265 GIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLMVV 320
           GI+TEGD+ R      K+   +     M   P+          A++++     I VL VV
Sbjct: 246 GIVTEGDVRRGLSAHGKNFLEMDTRACMGAAPRTCGPSITALEALEIMETPTQIYVLPVV 305

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +G++   D+
Sbjct: 306 DGDGRVLGLIRMHDI 320


>gi|169335089|ref|ZP_02862282.1| hypothetical protein ANASTE_01496 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257827|gb|EDS71793.1| hypothetical protein ANASTE_01496 [Anaerofustis stercorihominis DSM
           17244]
          Length = 203

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 5/198 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + KN  +Q   + I  E+  L  L  SL       F  AV+ I   KG++++TG GKSG 
Sbjct: 1   MEKNEILQKGKKVIEMERYELGRLMDSLDD----NFVKAVDMITECKGKIILTGTGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA-ILYYARR 136
           I  K+A+TL  TG P+FF+ A    +GD+G I  +DLII +S SG +  LK  ++  A+ 
Sbjct: 57  ISRKIAATLCCTGKPAFFLSAYNCENGDIGAIQPNDLIIAISNSGETTILKELVIPSAKT 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                I +T   +S +A   D+ L +  E E+CP G+  TTS    LA+GDALA+   E 
Sbjct: 117 IGAKAICLTGNTESTLAKLCDVALYIGVEKEACPTGVNATTSTTNTLAMGDALAMVSEEI 176

Query: 197 RNFSENDFYVLHPGGKLG 214
           R  +       H GG  G
Sbjct: 177 RGVTREQVLFYHQGGAWG 194


>gi|213418455|ref|ZP_03351521.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 151

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 86/133 (64%), Gaps = 6/133 (4%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T ASTGT S
Sbjct: 23  EREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSS 78

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT   +S +A
Sbjct: 79  FFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMA 138

Query: 154 CHADIVL--TLPK 164
             AD+ L   +PK
Sbjct: 139 RAADVHLCVKVPK 151


>gi|330946000|gb|EGH47307.1| KpsF/GutQ [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 172

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 3/172 (1%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIP 231
           + P +S    L +GDALA+ALL++R F+  DF   HPGG LG  L +   +VMHSG+S+P
Sbjct: 1   MPPASSTTAALVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGESLP 60

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V+ G  L DA+  ++ K  G  A+V+    L GI T+GD+ R   +  D+    +++VM
Sbjct: 61  SVQRGTLLRDALLEMTRKGLGMTAIVEADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVM 120

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             + K    + L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 121 TLHGKTAHAEMLAAEALKIMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 172


>gi|237798603|ref|ZP_04587064.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021456|gb|EGI01513.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 164

 Score =  115 bits (289), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 97/162 (59%), Gaps = 3/162 (1%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLID 241
           L +GDALA+ALL++R F+  DF   HPGG LG  L +   +VMHSGD++P V+ G  L D
Sbjct: 3   LVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRD 62

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+  ++ K  G  A+++    L GI T+GD+ R   +  D+   +++DVM  + K +  +
Sbjct: 63  ALLEMTRKGLGMTAILEADGTLAGIFTDGDLRRTLDRPVDIRQTTIDDVMTVHGKTVHAE 122

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A++++  H I  L+VVD   + +G  +  DLLR G++
Sbjct: 123 MLAAEALKIMEDHKIGALVVVDRNDRPVGAFNLQDLLRAGVM 164


>gi|332827680|gb|EGK00419.1| hypothetical protein HMPREF9455_03267 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 201

 Score =  114 bits (286), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 98/160 (61%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T +STGTPS F+H +EA HGDLG++  +D+++
Sbjct: 34  VEQVNKKKGKLVTSGMGKAGQIAQNIATTFSSTGTPSVFLHPSEAQHGDLGILQENDIVL 93

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            +S SG + E+  ++  A+     I  I ITS+  S++A  AD+ +   +  E C  GL 
Sbjct: 94  AISNSGKTREIIELISLAKNLIPGIKFIVITSDPDSLLAQKADVCILTGRPEEVCNLGLT 153

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++  NFS  D+   H GG LG
Sbjct: 154 PTTSTTVMTVIGDILVVGTMKRINFSPADYAKRHHGGYLG 193


>gi|332886139|gb|EGK06383.1| hypothetical protein HMPREF9456_00257 [Dysgonomonas mossii DSM
           22836]
          Length = 201

 Score =  111 bits (278), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 100/160 (62%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T +STGTP+ F+H +EA HGDLG++  +D+++
Sbjct: 34  VEQVNQKKGKLVTSGMGKAGQIAQNIATTFSSTGTPAVFLHPSEAQHGDLGILQENDIVL 93

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            +S SG + E+  ++  A+     I  I ITS+++S++A  AD+ +   +  E C  GL 
Sbjct: 94  AISNSGKTREIIELITLAKDLIPGIKFIVITSDSESLLAQKADVFIHTGRPEEVCTLGLT 153

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F++ D+   H GG LG
Sbjct: 154 PTTSTTVMTVIGDILVVGTMKRIGFTKVDYAKRHHGGYLG 193


>gi|330950267|gb|EGH50527.1| KpsF/GutQ [Pseudomonas syringae Cit 7]
          Length = 166

 Score =  111 bits (277), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 61/162 (37%), Positives = 96/162 (59%), Gaps = 3/162 (1%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLID 241
           L +GDALA+ALL++R F+  DF   HPGG LG  L +   +VMHSG+S+P V+ G  L D
Sbjct: 5   LVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRD 64

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+  ++ K  G  A+V+    L GI T+GD+ R   +  D+    +++VM  + K    +
Sbjct: 65  ALLEMTRKGLGMTAIVEADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAE 124

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 125 MLAAEALKIMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 166


>gi|153840280|ref|ZP_01992947.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|149746059|gb|EDM57189.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
          Length = 159

 Score =  110 bits (276), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 98/160 (61%), Gaps = 4/160 (2%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R FS  DF + HPGG LG  L +  SD+MH G+++P V     + DA+
Sbjct: 1   MGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDAL 60

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +VM KNP     + L
Sbjct: 61  LEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEVMTKNPTTAHPEML 120

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L++  NI+ L++  +  K +G ++  DLL+ G++
Sbjct: 121 AVEGLNLMQNKNINALILCKE-DKIVGALNMHDLLKAGVM 159


>gi|224171427|ref|XP_002339493.1| predicted protein [Populus trichocarpa]
 gi|222875267|gb|EEF12398.1| predicted protein [Populus trichocarpa]
          Length = 219

 Score =  110 bits (275), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 53/151 (35%), Positives = 93/151 (61%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G +  +G+GKSG + +K++ TL S G  + F+   +A HGD+G ++  D++++ S SG+
Sbjct: 59  NGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGN 118

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++EL  ++  A+     L+++TS   + +    D+ + LP E E CP  LAP TS  +Q+
Sbjct: 119 TEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQM 178

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG 214
             GD +AIAL+ +RN S+ ++   HP G++G
Sbjct: 179 VFGDTVAIALMGARNLSKEEYAANHPAGRIG 209


>gi|325520927|gb|EGC99901.1| KpsF/GutQ family protein [Burkholderia sp. TJI49]
          Length = 115

 Score =  109 bits (273), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 54/88 (61%), Positives = 69/88 (78%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +L+ +L   F  AV  +   +GRVV++GIGKSGHI  K+A+TLASTGTP+FFVH AEASH
Sbjct: 27  ALRDQLDGDFVQAVALLLGCRGRVVVSGIGKSGHIARKIAATLASTGTPAFFVHPAEASH 86

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAIL 131
           GDLGM+T DD+ I +S+SG S+EL AIL
Sbjct: 87  GDLGMVTADDVFIGISYSGESEELVAIL 114


>gi|213580065|ref|ZP_03361891.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 182

 Score =  109 bits (272), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 96/179 (53%), Gaps = 2/179 (1%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT-LFVCASDV 223
           E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +
Sbjct: 4   EREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHL 63

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT 282
           M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R        T
Sbjct: 64  MRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGALT 123

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 124 TPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 182


>gi|289809209|ref|ZP_06539838.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 142

 Score =  108 bits (271), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 1/141 (0%)

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH AEA HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   
Sbjct: 1   VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRA 60

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG 
Sbjct: 61  AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 120

Query: 216 -LFVCASDVMHSGDSIPLVKI 235
            L      +M  GD+IP V +
Sbjct: 121 RLLNNVHHLMRQGDAIPQVML 141


>gi|255013216|ref|ZP_05285342.1| putative sugar isomerase [Bacteroides sp. 2_1_7]
 gi|256838219|ref|ZP_05543729.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739138|gb|EEU52462.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 234

 Score =  108 bits (271), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 2/161 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +  + G+++++G+GK+G I   +A+T +STGTP+FF+H +EA HGDLG++ ++D+++
Sbjct: 65  VKHVHDLGGKLIMSGMGKAGQIALNIATTFSSTGTPAFFLHPSEAQHGDLGIVCKNDIML 124

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + EL  ++   R     +  I ITS   S +A  A++ L      E CP GL 
Sbjct: 125 LISNSGKTRELVELVDLTRGLVPDMKFIVITSNPDSPLAAEANVCLLTGAPKEVCPLGLT 184

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           PTTS  +   IGD L +  ++  +F+  D+   H GG LG+
Sbjct: 185 PTTSTTVMTVIGDILVVGTMKRIHFTNKDYAKRHHGGYLGS 225


>gi|150009487|ref|YP_001304230.1| putative sugar isomerase [Parabacteroides distasonis ATCC 8503]
 gi|262383204|ref|ZP_06076341.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298373896|ref|ZP_06983854.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_19]
 gi|301311696|ref|ZP_07217621.1| arabinose 5-phosphate isomerase [Bacteroides sp. 20_3]
 gi|149937911|gb|ABR44608.1| putative sugar isomerase [Parabacteroides distasonis ATCC 8503]
 gi|262296082|gb|EEY84013.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298268264|gb|EFI09919.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_19]
 gi|300830256|gb|EFK60901.1| arabinose 5-phosphate isomerase [Bacteroides sp. 20_3]
          Length = 203

 Score =  108 bits (270), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 99/161 (61%), Gaps = 2/161 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +  + G+++++G+GK+G I   +A+T +STGTP+FF+H +EA HGDLG++ ++D+++
Sbjct: 34  VKHVHDLGGKLIMSGMGKAGQIALNIATTFSSTGTPAFFLHPSEAQHGDLGIVCKNDIML 93

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + EL  ++   R     +  I ITS   S +A  A++ L      E CP GL 
Sbjct: 94  LISNSGKTRELVELVDLTRGLVPDMKFIVITSNPDSPLAAEANVCLLTGAPKEVCPLGLT 153

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           PTTS  +   IGD L +  ++  +F+  D+   H GG LG+
Sbjct: 154 PTTSTTVMTVIGDILVVGTMKRIHFTNKDYAKRHHGGYLGS 194


>gi|238794634|ref|ZP_04638240.1| Phosphosugar isomerase/binding protein [Yersinia intermedia ATCC
           29909]
 gi|238726023|gb|EEQ17571.1| Phosphosugar isomerase/binding protein [Yersinia intermedia ATCC
           29909]
          Length = 187

 Score =  108 bits (269), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ ++  ++  Q    +E +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 5   RELAALKDNVDPQVWLQV---LEMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 61

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 62  LNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVQIISVTENEQSAIAQV 121

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+   L+  R F++     +HPGG +G
Sbjct: 122 SALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARRGFTKQALLAVHPGGDVG 180


>gi|269140703|ref|YP_003297404.1| sugar isomerase (SIS) [Edwardsiella tarda EIB202]
 gi|267986364|gb|ACY86193.1| sugar isomerase (SIS) [Edwardsiella tarda EIB202]
 gi|304560486|gb|ADM43150.1| Phosphosugar isomerase/binding protein [Edwardsiella tarda FL6-60]
          Length = 206

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 60/190 (31%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L   L  E   Q+   ++++   +G+++++G+G SG    K+A  LA    P+ +++
Sbjct: 19  LTQLAQRLDAE---QWQQLLDRLSGCRGKIMVSGVGTSGIAARKVAHMLACVERPAIYLN 75

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A +A+HGDLG +  DDL+I++S  G+S+EL  +L   +   +PLIA+T   +S +A  A 
Sbjct: 76  ATDAAHGDLGFLRGDDLVILISRGGNSEELTRLLPALQAKGVPLIAVTENPRSAIARAAQ 135

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           + L    + E  P  +  TTS I+ LA+ DA    L++   +       +HPGG +G   
Sbjct: 136 LTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQRSGYDRQTLLSVHPGGDVGLSL 195

Query: 218 VCASDVMHSG 227
             ++D   SG
Sbjct: 196 RRSTDDQASG 205


>gi|238782949|ref|ZP_04626977.1| Phosphosugar isomerase/binding protein [Yersinia bercovieri ATCC
           43970]
 gi|238716152|gb|EEQ08136.1| Phosphosugar isomerase/binding protein [Yersinia bercovieri ATCC
           43970]
          Length = 187

 Score =  107 bits (268), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 104/179 (58%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ S+  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 5   RELAALKESVDQQVWLQV---LDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 61

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 62  LNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 121

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+ I L+    F++     +HPGG +G
Sbjct: 122 SALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICICLMARSGFTKESLLAVHPGGDVG 180


>gi|270264519|ref|ZP_06192785.1| sugar isomerase (SIS) [Serratia odorifera 4Rx13]
 gi|270041655|gb|EFA14753.1| sugar isomerase (SIS) [Serratia odorifera 4Rx13]
          Length = 199

 Score =  107 bits (267), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/155 (36%), Positives = 90/155 (58%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           + A +G++V+TG+G SG    K+A  LA    P+ +++A +A+HGDLG +  DDL+I++S
Sbjct: 38  LAACRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAAHGDLGFLRGDDLMILIS 97

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
             G+SDEL  +L   +   +PLI +T    S +A  A +V+    E E  P  +  TTS 
Sbjct: 98  RGGNSDELTRLLPTLQAKGVPLIGVTENPDSAIAHAAQLVIRTGVENEIDPLNMLATTSI 157

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ++ LAI D     L+E   +S+     +HPGG +G
Sbjct: 158 VLVLAIFDVACACLMERSGYSKETLLAVHPGGDVG 192


>gi|213859884|ref|ZP_03385588.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 86

 Score =  107 bits (267), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 49/86 (56%), Positives = 65/86 (75%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S
Sbjct: 1   GKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGES 60

Query: 125 DELKAILYYARRFSIPLIAITSENKS 150
            E+ A++   +R  +PLI IT   +S
Sbjct: 61  SEITALIPVLKRLHVPLICITGRPES 86


>gi|283786156|ref|YP_003366021.1| hypothetical protein ROD_24861 [Citrobacter rodentium ICC168]
 gi|282949610|emb|CBG89229.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 199

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 95/163 (58%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q+   + +++  +G++V+TG+G SG    K+A  LA    P+ +++A +A+HGDLG +  
Sbjct: 30  QWQALMTELRGCRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAAHGDLGFLGA 89

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DDL+I+LS  G+SDEL  +L       +P++++T    S +A  A +V++   + E+ P 
Sbjct: 90  DDLMIMLSRGGNSDELTRLLPGLEAKKVPILSVTENADSAIARAARLVISTGVQREADPL 149

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            +  TTS ++ +AI DA    L+    +S      +HPGG +G
Sbjct: 150 NMLATTSIMLVIAIFDAACACLMSESGYSRETLLSVHPGGDVG 192


>gi|283832078|ref|ZP_06351819.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291071703|gb|EFE09812.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 199

 Score =  107 bits (266), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 54/162 (33%), Positives = 96/162 (59%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           +   + +++  +G++V+TG+G SG    K+A  LA    P+ +++A +A+HGDLG +  D
Sbjct: 31  WQSLMAELRGCQGKIVVTGVGTSGIAARKVAHMLACVERPAIYLNATDAAHGDLGFLRAD 90

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL+I+LS  G+SDEL  +L      ++PL+++T    S +A  + +V++   + E+ P  
Sbjct: 91  DLVIMLSRGGNSDELTRLLPGLAARNVPLLSVTENADSAIAKASRLVISTGVQREADPLN 150

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +  TTS ++ LAI DA    L+    +S+     +HPGG +G
Sbjct: 151 MLATTSILLVLAIFDAACACLMSESGYSKETLLAVHPGGDVG 192


>gi|163793297|ref|ZP_02187272.1| KpsF/GutQ family protein [alpha proteobacterium BAL199]
 gi|159181099|gb|EDP65614.1| KpsF/GutQ family protein [alpha proteobacterium BAL199]
          Length = 198

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 94/164 (57%), Gaps = 2/164 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A++ +    G+++  G+GK+G +  + A+TLAST TP+F++H +EA+HGDLG I   
Sbjct: 27  FERALDAMANCPGKIITLGMGKAGFVARRFAATLASTATPAFYIHPSEAAHGDLGHIEDG 86

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSI--PLIAITSENKSVVACHADIVLTLPKEPESCP 170
           D +I  S SG + E+   +  +R  +    +I ITS   S +   AD+VL +    E CP
Sbjct: 87  DCMIAFSTSGKTREVLECIELSRHLNQHGTVIGITSHPDSGLRDLADVVLDMGVIEEPCP 146

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            GL P+ S     AI DAL + L+E +  + + + V H GG LG
Sbjct: 147 LGLTPSASIAAMSAIADALTLTLMERKGVTRDQYGVRHHGGYLG 190


>gi|323485555|ref|ZP_08090901.1| hypothetical protein HMPREF9474_02652 [Clostridium symbiosum
           WAL-14163]
 gi|323694538|ref|ZP_08108705.1| hypothetical protein HMPREF9475_03569 [Clostridium symbiosum
           WAL-14673]
 gi|323401203|gb|EGA93555.1| hypothetical protein HMPREF9474_02652 [Clostridium symbiosum
           WAL-14163]
 gi|323501412|gb|EGB17307.1| hypothetical protein HMPREF9475_03569 [Clostridium symbiosum
           WAL-14673]
          Length = 196

 Score =  105 bits (263), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 53/163 (32%), Positives = 91/163 (55%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q     E IK  +G+VV++  G S     K+A TL   G P+FF+  ++A HG LG+I  
Sbjct: 27  QVDAVTETIKNCRGKVVLSACGTSAQAARKIAHTLCCVGCPAFFIPPSDALHGGLGVIGE 86

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++++LS  G + E+  ++  ARR    +I +T   +   A   D++L +  + E    
Sbjct: 87  QDVLLLLSKGGYTKEINEMILPARRSGARVIMVTENEEGEYAKSCDLILRIKVKEEPDRF 146

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            +  T S +  +A+ DA++I+L+E + F++  FY +HPGG +G
Sbjct: 147 NMLATASTLAVIAVFDAVSISLMEEKQFTKEHFYRIHPGGGVG 189


>gi|238797904|ref|ZP_04641395.1| Phosphosugar isomerase/binding protein [Yersinia mollaretii ATCC
           43969]
 gi|238718209|gb|EEQ10034.1| Phosphosugar isomerase/binding protein [Yersinia mollaretii ATCC
           43969]
          Length = 187

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L  ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 5   RELAALRENVDQQVWLQV---LDMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 61

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 62  LNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 121

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+   L+    F++     +HPGG +G
Sbjct: 122 STLVLKTHVQQEIDPLNMLATTSIVLVLALFDAICACLMARSGFTKETLLAVHPGGDVG 180


>gi|22124150|ref|NP_667573.1| hypothetical protein y0230 [Yersinia pestis KIM 10]
 gi|45443638|ref|NP_995177.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108809642|ref|YP_653558.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Antiqua]
 gi|108813692|ref|YP_649459.1| phosphosugar isomerase/binding protein [Yersinia pestis Nepal516]
 gi|145597561|ref|YP_001161637.1| phosphosugar isomerase/binding protein [Yersinia pestis Pestoides
           F]
 gi|153997424|ref|ZP_02022524.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CA88-4125]
 gi|165927541|ref|ZP_02223373.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937396|ref|ZP_02225959.1| SIS domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166012008|ref|ZP_02232906.1| SIS domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214134|ref|ZP_02240169.1| SIS domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402017|ref|ZP_02307500.1| SIS domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167420638|ref|ZP_02312391.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425540|ref|ZP_02317293.1| SIS domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468434|ref|ZP_02333138.1| phosphosugar isomerase/binding protein [Yersinia pestis FV-1]
 gi|218930648|ref|YP_002348523.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CO92]
 gi|229836781|ref|ZP_04456946.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Pestoides A]
 gi|229839319|ref|ZP_04459478.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229899883|ref|ZP_04515024.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904195|ref|ZP_04519306.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Nepal516]
 gi|270488635|ref|ZP_06205709.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294505236|ref|YP_003569298.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Z176003]
 gi|21956906|gb|AAM83824.1|AE013623_1 hypothetical [Yersinia pestis KIM 10]
 gi|45438508|gb|AAS64054.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108777340|gb|ABG19859.1| phosphosugar isomerase/binding protein [Yersinia pestis Nepal516]
 gi|108781555|gb|ABG15613.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Antiqua]
 gi|115349259|emb|CAL22226.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CO92]
 gi|145209257|gb|ABP38664.1| phosphosugar isomerase/binding protein [Yersinia pestis Pestoides
           F]
 gi|149289061|gb|EDM39141.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CA88-4125]
 gi|165914501|gb|EDR33115.1| SIS domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920435|gb|EDR37712.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989092|gb|EDR41393.1| SIS domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204621|gb|EDR49101.1| SIS domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961444|gb|EDR57465.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048603|gb|EDR60011.1| SIS domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055554|gb|EDR65347.1| SIS domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229678313|gb|EEO74418.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Nepal516]
 gi|229687375|gb|EEO79450.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695685|gb|EEO85732.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705724|gb|EEO91733.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Pestoides A]
 gi|262363298|gb|ACY60019.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           D106004]
 gi|262367323|gb|ACY63880.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           D182038]
 gi|270337139|gb|EFA47916.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294355695|gb|ADE66036.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Z176003]
 gi|320017199|gb|ADW00771.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 201

 Score =  105 bits (262), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 19  RELAALKENVDQQVWLQV---LDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 75

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 76  LNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 135

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G 
Sbjct: 136 SALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGDVGM 195

Query: 216 LF 217
           + 
Sbjct: 196 VL 197


>gi|189464965|ref|ZP_03013750.1| hypothetical protein BACINT_01309 [Bacteroides intestinalis DSM
           17393]
 gi|189437239|gb|EDV06224.1| hypothetical protein BACINT_01309 [Bacteroides intestinalis DSM
           17393]
          Length = 258

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 90  VEQIHRRKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 149

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 150 LISNSGKTREIVELTQLAHNLNPELKFIVITGNPDSPLAHESDVCLSTGKPKEVCALGMT 209

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L + +++   F+  D+   H GG LG
Sbjct: 210 PTTSTTVMTVIGDILVVQVMQQTGFTIGDYSKRHHGGYLG 249


>gi|154490033|ref|ZP_02030294.1| hypothetical protein PARMER_00262 [Parabacteroides merdae ATCC
           43184]
 gi|154089475|gb|EDN88519.1| hypothetical protein PARMER_00262 [Parabacteroides merdae ATCC
           43184]
          Length = 205

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +  + G ++ +G+GK+G I   +A+T  STGTP++F+H +EA HGDLG++ ++D+++
Sbjct: 34  VKHVHELGGNLITSGMGKAGQIAMNIATTFCSTGTPAYFLHPSEAQHGDLGIVRKNDVML 93

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + EL  ++   R     +  I IT    S +A  A I L      E CP GL 
Sbjct: 94  LISNSGKTRELLELVELTRGLVPEMQFIVITGNPDSPLAAEATICLPTGAPKEVCPLGLT 153

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           PTTS  +   IGD L +  ++  NF   D+   H GG LG+
Sbjct: 154 PTTSTTVMTVIGDLLVVGTMKRINFGYPDYAKRHHGGYLGS 194


>gi|218258506|ref|ZP_03474862.1| hypothetical protein PRABACTJOHN_00517 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225382|gb|EEC98032.1| hypothetical protein PRABACTJOHN_00517 [Parabacteroides johnsonii
           DSM 18315]
          Length = 205

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 93/161 (57%), Gaps = 2/161 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +  + G ++ +G+GK+G I   +A+T  STGTP++F+H +EA HGDLG++ ++D+++
Sbjct: 34  VKHVHELGGNLITSGMGKAGQIAMNIATTFCSTGTPAYFLHPSEAQHGDLGIVRKNDVML 93

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + EL  ++   R     +  I IT    S +A  A I L      E CP GL 
Sbjct: 94  LISNSGKTRELLELVELTRGLVPEMQFIVITGNPDSPLAAEATICLPTGAPKEVCPLGLT 153

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           PTTS  +   IGD L +  ++  NF   D+   H GG LG+
Sbjct: 154 PTTSTTVMTVIGDLLVVGTMKRINFGYPDYAKRHHGGYLGS 194


>gi|188995897|ref|YP_001930149.1| probable sugar isomerase [Porphyromonas gingivalis ATCC 33277]
 gi|188595577|dbj|BAG34552.1| probable sugar isomerase [Porphyromonas gingivalis ATCC 33277]
          Length = 213

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/161 (35%), Positives = 94/161 (58%), Gaps = 4/161 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V ++    GR++ +G+GK+G I + +A+T +STGTP++F+H +EA HGDLG++   D+++
Sbjct: 45  VRQVHGSNGRLITSGMGKAGQIAANIATTFSSTGTPAYFLHPSEAQHGDLGLVRSGDIML 104

Query: 117 VLSWSGSSDELKAILYYARRFSIP---LIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++S SG + E+  ++   +R  +P    I IT   +S +A   D+ L      E CP G+
Sbjct: 105 LISNSGRTREVLELVELTKRL-VPDTKFILITGNPESQLAAEVDVCLATGNPAEVCPLGM 163

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            PTTS  +   IGD L +  ++   F   D+   H GG LG
Sbjct: 164 TPTTSTTVMTVIGDVLVVGTMQEIGFGFEDYARRHHGGYLG 204


>gi|51597882|ref|YP_072073.1| phosphosugar isomerase/binding protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947649|ref|YP_001399362.1| SIS domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|170022687|ref|YP_001719192.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis YPIII]
 gi|186897079|ref|YP_001874191.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis PB1/+]
 gi|51591164|emb|CAH22829.1| putative phosphosugar isomerase/binding protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152959144|gb|ABS46605.1| SIS domain protein [Yersinia pseudotuberculosis IP 31758]
 gi|169749221|gb|ACA66739.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis YPIII]
 gi|186700105|gb|ACC90734.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis PB1/+]
          Length = 201

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 103/179 (57%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 19  RELAALKENVDQQVWLQV---LDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 75

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 76  LNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 135

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G
Sbjct: 136 SALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGDVG 194


>gi|162419263|ref|YP_001605767.1| SIS domain-containing protein [Yersinia pestis Angola]
 gi|162352078|gb|ABX86026.1| SIS domain protein [Yersinia pestis Angola]
          Length = 201

 Score =  105 bits (261), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/182 (30%), Positives = 104/182 (57%), Gaps = 3/182 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 19  RELAALKENVDQQVWLQV---LDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 75

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 76  LNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 135

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G 
Sbjct: 136 SALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGYVGM 195

Query: 216 LF 217
           + 
Sbjct: 196 VL 197


>gi|238755687|ref|ZP_04617021.1| Phosphosugar isomerase/binding protein [Yersinia ruckeri ATCC
           29473]
 gi|238706054|gb|EEP98437.1| Phosphosugar isomerase/binding protein [Yersinia ruckeri ATCC
           29473]
          Length = 193

 Score =  104 bits (260), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L+ L+ ++   +  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 11  RELAVLKENVDQRVWLQV---LDMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 68  LNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 127

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+ + L+    FS+     +HPGG +G
Sbjct: 128 SALVLKTHVQQEIDPLNMLATTSIVLVLALFDAICVCLMARGGFSKERLLAVHPGGDVG 186


>gi|34539957|ref|NP_904436.1| SIS domain-containing protein [Porphyromonas gingivalis W83]
 gi|34396268|gb|AAQ65335.1| SIS domain protein [Porphyromonas gingivalis W83]
          Length = 206

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V ++    GR++ +G+GK+G I + +A+T +STGTP++F+H +EA HGDLG++   D+++
Sbjct: 38  VRQVHGSNGRLITSGMGKAGQIAANIATTFSSTGTPAYFLHPSEAQHGDLGLVRSGDIML 97

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  ++   +R       I IT   +S +A   D+ L      E CP G+ 
Sbjct: 98  LISNSGRTREVLELVELTKRLVPDTKFILITGNPESQLAAEVDVCLATGNPAEVCPLGMT 157

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F   D+   H GG LG
Sbjct: 158 PTTSTTVMTVIGDVLVVGTMQEIGFGFEDYARRHHGGYLG 197


>gi|238758374|ref|ZP_04619552.1| Phosphosugar isomerase/binding protein [Yersinia aldovae ATCC
           35236]
 gi|238703497|gb|EEP96036.1| Phosphosugar isomerase/binding protein [Yersinia aldovae ATCC
           35236]
          Length = 193

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 102/179 (56%), Gaps = 3/179 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R L++L+ ++   +  Q    +  +   +G++ +TG+G SG    K+A  LA    P+ +
Sbjct: 11  RELAALKDNVDQRVWLQV---LGMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAIY 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A  
Sbjct: 68  LNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQV 127

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           + +VL    + E  P  +  TTS ++ LA+ DA+ + L+    FS+     +HPGG +G
Sbjct: 128 SALVLKTHVQQEIDPLNMLATTSIVLVLALFDAICVCLMARSGFSKETLLAVHPGGDVG 186


>gi|224536828|ref|ZP_03677367.1| hypothetical protein BACCELL_01704 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521550|gb|EEF90655.1| hypothetical protein BACCELL_01704 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 250

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 94/160 (58%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 82  VEQIHRRKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 141

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 142 LISNSGKTREIVELTQLAHNLNPDLKFIVITGNPDSPLAHESDVCLSTGKPKEVCALGMT 201

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L + +++   F+  D+   H GG LG
Sbjct: 202 PTTSTTVMTVIGDILVVQVMKQTGFTIGDYSKRHHGGYLG 241


>gi|270294985|ref|ZP_06201186.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274232|gb|EFA20093.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 201

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPELKFIVITGNPDSPLAHESDVCLSTGKPQEVCALGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIEDYSKRHHGGYLG 192


>gi|311992834|ref|YP_004009701.1| hypothetical protein Acj61p084 [Acinetobacter phage Acj61]
 gi|295815123|gb|ADG36049.1| conserved hypothetical protein [Acinetobacter phage Acj61]
          Length = 210

 Score =  104 bits (259), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 108/210 (51%), Gaps = 22/210 (10%)

Query: 23  TVQCALRSIIAEKRGLSSLESS--LQGELSFQFHCAVEKIKAI-----KGRVVITGIGKS 75
            +  AL+ + A+   L  L ++  L G+   ++   +E +K +     + R++ITG+GK+
Sbjct: 3   NIDLALQVVEAQNDALDHLHTAIALNGD---KYDSMIETLKPVAASNYRRRIMITGVGKN 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            ++ +K + T AS G PS +++    SHGD G I  DD++I +S SG +DE++ +  +  
Sbjct: 60  ANMAAKASETFASLGIPSMYLNTCHYSHGDAGFIAHDDVVIHVSRSGKTDEMQYMAQHLN 119

Query: 136 RFSIPLIAI--------TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           +    ++ I        T E K+      DI   +P   E   + LAPTTS  + LA+ D
Sbjct: 120 KIRPNVLQILLHCNPNLTDEQKAPF----DIEFGIPGIVECDDNNLAPTTSTTVLLALLD 175

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLF 217
            + + L +   F   DFY  HPGG LG + 
Sbjct: 176 TIGVILSKYVGFKREDFYAYHPGGSLGAML 205


>gi|189460622|ref|ZP_03009407.1| hypothetical protein BACCOP_01263 [Bacteroides coprocola DSM 17136]
 gi|189432581|gb|EDV01566.1| hypothetical protein BACCOP_01263 [Bacteroides coprocola DSM 17136]
          Length = 200

 Score =  104 bits (259), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 61/160 (38%), Positives = 94/160 (58%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A R   S+  I IT   +S +A  ADI L      E CP G+ 
Sbjct: 93  LISNSGKTREIVELTDLADRLNPSLKKIVITGNPESPLAEAADICLATGHPDEVCPLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTIMTVIGDILVVETMKQTGFTIEEYSKRHHGGYLG 192


>gi|317477972|ref|ZP_07937155.1| SIS domain-containing protein [Bacteroides sp. 4_1_36]
 gi|316905886|gb|EFV27657.1| SIS domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 201

 Score =  103 bits (258), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLAHESDVCLSTGKPQEVCVLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKQTGFTIEDYSKRHHGGYLG 192


>gi|237732521|ref|ZP_04563002.1| sugar isomerase [Citrobacter sp. 30_2]
 gi|226908060|gb|EEH93978.1| sugar isomerase [Citrobacter sp. 30_2]
          Length = 199

 Score =  103 bits (257), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 96/162 (59%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           +   + +++  +G++V+TG+G SG    K+A  LA    P+ +++A +A+HGDLG +  +
Sbjct: 31  WQSLMAELRGCQGKIVVTGVGTSGIAARKVAHMLACVERPAIYLNATDAAHGDLGFLRAN 90

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL+I+LS  G+SDEL  +L      ++P++++T    S +A  + +V++   + E+ P  
Sbjct: 91  DLVIMLSRGGNSDELTRLLPGLNARNVPILSVTENADSAIAKASRLVISTGVQREADPLN 150

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +  TTS ++ LAI DA    L+    +S+     +HPGG +G
Sbjct: 151 MLATTSILLVLAIFDAACACLMSESGYSKETLLSVHPGGDVG 192


>gi|153807210|ref|ZP_01959878.1| hypothetical protein BACCAC_01488 [Bacteroides caccae ATCC 43185]
 gi|149130330|gb|EDM21540.1| hypothetical protein BACCAC_01488 [Bacteroides caccae ATCC 43185]
          Length = 201

 Score =  103 bits (257), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQIHQKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A      +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLDPELKFIVITGNPDSPLAHESDVCLSTGKPAEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIAEYSKRHHGGYLG 192


>gi|306834477|ref|ZP_07467590.1| arabinose 5-phosphate isomerase [Streptococcus bovis ATCC 700338]
 gi|304423279|gb|EFM26432.1| arabinose 5-phosphate isomerase [Streptococcus bovis ATCC 700338]
          Length = 199

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 52/150 (34%), Positives = 87/150 (58%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK  H+   +++ L+STGTP++F+ A E+ HG  G +   D++I +S SG +
Sbjct: 44  GRVHVTGIGKPSHVSQYISALLSSTGTPAYFLDATESVHGSAGQVMEGDIVIAISNSGET 103

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL+  +   ++ SI ++++T  N S +A + D+ L    E E       P  S I ++ 
Sbjct: 104 LELQQTIEALKKLSIKIVSVTGGNSSWLARNTDLTLFAGVEEEGDSFNKPPRASIIAEIL 163

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           I  A++I L E  + +   +++ HPGG LG
Sbjct: 164 ILQAVSIVLQEKSHLNMEQYHLWHPGGSLG 193


>gi|309775179|ref|ZP_07670191.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308917134|gb|EFP62862.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 204

 Score =  103 bits (256), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 85/159 (53%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           + RV +TGIGK GH+    AS L+STGTP++ +H  EA HG  G +   D++I +S SG 
Sbjct: 45  RNRVHVTGIGKPGHVAGYAASLLSSTGTPTYELHGTEAVHGSAGQVLPGDVVIAISNSGE 104

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + ELKA +   +     LIA+T +  S +A   D+ L    + E  P    P  S + ++
Sbjct: 105 TTELKATVETLKSNGARLIALTGKADSWLAKQGDVTLIAGVKQEGDPMNKPPRASILAEM 164

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
            +  +L+I L  ++N +   +   HPGG LG     + D
Sbjct: 165 VMLQSLSILLQNAKNLTPQQYVKWHPGGSLGASIKNSED 203


>gi|160882948|ref|ZP_02063951.1| hypothetical protein BACOVA_00910 [Bacteroides ovatus ATCC 8483]
 gi|237720581|ref|ZP_04551062.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172622|ref|ZP_05759034.1| putative sugar isomerase [Bacteroides sp. D2]
 gi|293373369|ref|ZP_06619725.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CMC 3f]
 gi|299146928|ref|ZP_07039995.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_23]
 gi|315920912|ref|ZP_07917152.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111631|gb|EDO13376.1| hypothetical protein BACOVA_00910 [Bacteroides ovatus ATCC 8483]
 gi|229450332|gb|EEO56123.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631655|gb|EFF50277.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CMC 3f]
 gi|295086071|emb|CBK67594.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Bacteroides xylanisolvens XB1A]
 gi|298514813|gb|EFI38695.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_23]
 gi|313694787|gb|EFS31622.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 201

 Score =  102 bits (255), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQIHQKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A      +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTRLAHNLDPDLKFIVITGNPDSPLAKESDVCLSTGKPAEVCVLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIAEYSKRHHGGYLG 192


>gi|237716824|ref|ZP_04547305.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405594|ref|ZP_06082144.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644526|ref|ZP_06722280.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CC 2a]
 gi|294805788|ref|ZP_06764665.1| sugar isomerase, KpsF/GutQ family [Bacteroides xylanisolvens SD CC
           1b]
 gi|298483824|ref|ZP_07001996.1| arabinose 5-phosphate isomerase [Bacteroides sp. D22]
 gi|229442807|gb|EEO48598.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356469|gb|EEZ05559.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292640079|gb|EFF58343.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CC 2a]
 gi|294447009|gb|EFG15599.1| sugar isomerase, KpsF/GutQ family [Bacteroides xylanisolvens SD CC
           1b]
 gi|298270011|gb|EFI11600.1| arabinose 5-phosphate isomerase [Bacteroides sp. D22]
          Length = 201

 Score =  102 bits (254), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQIHQKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A      +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTRLAHNLDPDLKFIVITGNPDSPLAKESDVCLSTGKPAEVCVLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIAEYSKRHHGGYLG 192


>gi|29348715|ref|NP_812218.1| putative sugar isomerase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568942|ref|ZP_04846352.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298387078|ref|ZP_06996632.1| arabinose 5-phosphate isomerase [Bacteroides sp. 1_1_14]
 gi|29340621|gb|AAO78412.1| putative sugar isomerase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840961|gb|EES69042.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298260228|gb|EFI03098.1| arabinose 5-phosphate isomerase [Bacteroides sp. 1_1_14]
          Length = 201

 Score =  102 bits (254), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQIHQKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A      +  I IT    S +A  +++ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTRLAHNLDPELKFIVITGNPDSPLANESNVCLSTGKPAEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKKTGFTIEEYSKRHHGGYLG 192


>gi|300717700|ref|YP_003742503.1| phosphosugar isomerase/binding protein [Erwinia billingiae Eb661]
 gi|299063536|emb|CAX60656.1| Phosphosugar isomerase/binding protein [Erwinia billingiae Eb661]
          Length = 201

 Score =  102 bits (254), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 99/183 (54%), Gaps = 3/183 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  L++LES L  +   Q+   +  +   +G++ +TGIG SG    K+A  L+    P+ 
Sbjct: 18  RDALTTLESQLDRQ---QWLAVLNTLARCEGKIAVTGIGTSGIAARKIAHMLSCVERPAT 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           ++ AA+A+HGD+G +   D++I+LS  G+SDEL  +L   +     L+++T    S +A 
Sbjct: 75  WLSAADAAHGDIGFLRASDVLIMLSRGGNSDELTRLLPTVKSKGCTLVSVTENAGSAIAQ 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            AD +L +P+  E  P  +  TTS I  LA+ DA+   L+    +S      +HP G +G
Sbjct: 135 AADRLLLIPETQEIDPLNMLATTSIISVLAVFDAMIAVLMTQSGYSRETLLAVHPAGNVG 194

Query: 215 TLF 217
            + 
Sbjct: 195 KVL 197


>gi|255690666|ref|ZP_05414341.1| arabinose 5-phosphate isomerase [Bacteroides finegoldii DSM 17565]
 gi|260623690|gb|EEX46561.1| arabinose 5-phosphate isomerase [Bacteroides finegoldii DSM 17565]
          Length = 201

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++    G++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQVHQKNGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A      +  I IT    S +A  +D+ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTRLAHNLDPDLKFIVITGNPDSPLAQESDVCLSTGKPAEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKKTQFTIEEYSKRHHGGYLG 192


>gi|294638198|ref|ZP_06716452.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
 gi|291088634|gb|EFE21195.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
          Length = 205

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 94/173 (54%), Gaps = 6/173 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++++   +G++V++G+G SG    K+A  LA    P+ ++ A +A+HGDLG +  +DL+I
Sbjct: 35  LDRLDGCRGKIVVSGVGTSGIAARKVAHMLACVERPAIYLSATDAAHGDLGFLRAEDLVI 94

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S  G+SDEL  +L       +PLIA+T    S +A  A + L    + E  P  +  T
Sbjct: 95  LISRGGNSDELTRLLPTLLAKGVPLIAVTENPDSAIAQAAQLTLATGVQREIDPLNMLAT 154

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           TS I+ LA+ DA    L++   +       +HPGG +G        + H+GD 
Sbjct: 155 TSIILVLALFDAACACLMQRSGYDRRTLLAVHPGGDVGL------SLRHAGDQ 201


>gi|160888632|ref|ZP_02069635.1| hypothetical protein BACUNI_01049 [Bacteroides uniformis ATCC 8492]
 gi|156861946|gb|EDO55377.1| hypothetical protein BACUNI_01049 [Bacteroides uniformis ATCC 8492]
          Length = 201

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +++ L+  K  E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLAHESNVCLSTGKPQEVCVLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIEDYSKRHHGGYLG 192


>gi|157372930|ref|YP_001480919.1| sugar isomerase (SIS) [Serratia proteamaculans 568]
 gi|157324694|gb|ABV43791.1| sugar isomerase (SIS) [Serratia proteamaculans 568]
          Length = 199

 Score =  102 bits (253), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 88/155 (56%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           + A +G++V+TG+G SG    K+A  LA    P+ +++A +A+HGDLG +  DDL+I++S
Sbjct: 38  LAACRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAAHGDLGFLRGDDLMILIS 97

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
             G+SDEL  +L   +   + +I +T    S +A  A + +    E E  P  +  TTS 
Sbjct: 98  RGGNSDELTRLLPTLQAKGVTVIGVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSI 157

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ++ LAI DA    L+E   + +     +HPGG +G
Sbjct: 158 VLVLAIFDAACACLMERSGYDKETLLAVHPGGDVG 192


>gi|329956337|ref|ZP_08296934.1| sugar isomerase, KpsF/GutQ family [Bacteroides clarus YIT 12056]
 gi|328524234|gb|EGF51304.1| sugar isomerase, KpsF/GutQ family [Bacteroides clarus YIT 12056]
          Length = 201

 Score =  101 bits (252), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPRLKFIVITGNPDSPLAQESDVCLSTGSPKEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMQRTGFTIEDYSKRHHGGYLG 192


>gi|119193957|ref|XP_001247582.1| hypothetical protein CIMG_01353 [Coccidioides immitis RS]
          Length = 467

 Score =  101 bits (252), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 103/177 (58%), Gaps = 20/177 (11%)

Query: 56  AVEKIKA---IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           AVE+I     + G++VI G+GKSG IG KL +T+ S G  S F+H  EA HGDLGMI ++
Sbjct: 90  AVEQIAKTINVGGKLVICGVGKSGKIGEKLVATMNSFGIQSCFLHPTEALHGDLGMIKQN 149

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE-NKSVVACHAD------IVLTLP-K 164
           D ++ +++SG + EL  +L +     +P+IAIT+    S  A  +D      I+L  P  
Sbjct: 150 DTLLFITFSGKTSELSMVLPHIPPM-LPVIAITAHMQPSSCALLSDSDIRYTILLPAPVH 208

Query: 165 EPESCPHGL-APTTSAIMQLAIGDALAIALLES------RNFSENDFYVLHPGGKLG 214
           E E    GL APTTS  + LA+GDALA+A+  S      R  +E  F   HPGG +G
Sbjct: 209 EREEISFGLPAPTTSTTVALAVGDALALAVARSLHTIPGRGPAEV-FKEFHPGGAIG 264


>gi|303311661|ref|XP_003065842.1| SIS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105504|gb|EER23697.1| SIS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039739|gb|EFW21673.1| sugar isomerase [Coccidioides posadasii str. Silveira]
          Length = 467

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 20/177 (11%)

Query: 56  AVEKIKA---IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           AVE+I     + G++VI G+GKSG IG KL +T+ S G  S F+H  EA HGDLGMI ++
Sbjct: 90  AVEQIAKTINVGGKLVICGVGKSGKIGEKLVATMNSFGIQSCFLHPTEALHGDLGMIKQN 149

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK-SVVACHAD------IVLTLP-K 164
           D ++ +++SG + EL  +L +     +P+IAIT+  + S  A  +D      I+L  P  
Sbjct: 150 DTLLFITFSGKTSELSMVLPHIPPM-LPVIAITAHTQPSSCALLSDSDIRYTILLPAPVH 208

Query: 165 EPESCPHGL-APTTSAIMQLAIGDALAIALLES------RNFSENDFYVLHPGGKLG 214
           E E    GL APTTS  + LA+GDALA+A+  S      R  +E  F   HPGG +G
Sbjct: 209 EREEISFGLPAPTTSTTVALAVGDALALAVARSLHTIPGRGPAEV-FKGFHPGGAIG 264


>gi|225575407|ref|ZP_03784017.1| hypothetical protein RUMHYD_03497 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037352|gb|EEG47598.1| hypothetical protein RUMHYD_03497 [Blautia hydrogenotrophica DSM
           10507]
          Length = 208

 Score =  101 bits (251), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 86/160 (53%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K K    R+ I+GIGK  HI   +AS ++STGTP++F+H  EA HG  G +  +D++I
Sbjct: 39  IQKAKEAGNRLHISGIGKPAHIAGYIASLMSSTGTPAYFLHGTEAVHGSCGQLKENDVVI 98

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S SG + E++A +   +     +I ++    S +A  +D+ L      E      AP 
Sbjct: 99  FISNSGETAEMRATVQAIKNNGCKVIGVSGNPASWLAKQSDVHLFAGVREEGGVLNRAPR 158

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
            S IM+  +  AL++ L    + +   +   HPGGKLG L
Sbjct: 159 MSIIMETMVLQALSVVLQSQEHVTPQQYVRWHPGGKLGEL 198


>gi|302914571|ref|XP_003051163.1| hypothetical protein NECHADRAFT_41459 [Nectria haematococca mpVI
           77-13-4]
 gi|256732101|gb|EEU45450.1| hypothetical protein NECHADRAFT_41459 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 99/168 (58%), Gaps = 11/168 (6%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+ +++   G+++I G+GKSGHIG KL +T  S    + F+H  EA HGDLG+I  +D +
Sbjct: 106 AITRLQETTGKLIIVGVGKSGHIGQKLVATFKSLAIQAVFLHPTEALHGDLGIIGPNDTL 165

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITS----ENKSVVACHADIVLTLP---KEPES 168
           + +++SG + EL  +L +    S+P+I +TS    E    +    D +L LP    EPE 
Sbjct: 166 MFITYSGKTQELLIMLPHLDE-SLPVILLTSHTSHETCEFIKHRPDTIL-LPAPIPEPEK 223

Query: 169 CPHGL-APTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLG 214
              G+ APTTS  + LA+GDALA+A  +  + S  + F   HPGG +G
Sbjct: 224 TSFGVSAPTTSTTVALALGDALAVAASKEMHASVASVFARNHPGGAIG 271


>gi|302337865|ref|YP_003803071.1| Arabinose-5-phosphate isomerase [Spirochaeta smaragdinae DSM 11293]
 gi|301635050|gb|ADK80477.1| Arabinose-5-phosphate isomerase [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 89/167 (53%), Gaps = 3/167 (1%)

Query: 53  FHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           +  AVE I A +    RV ITGIGK  H+   +AS L+STGTP++++H  EA HG  G +
Sbjct: 34  YEDAVELILAAEKRGNRVHITGIGKPSHVAEYVASLLSSTGTPTYYLHGTEAVHGSCGQL 93

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
              D++I +S SG + ELKA +   +R    +IA+T    S +A   D  L      E  
Sbjct: 94  LPGDVVICISNSGETVELKATVSAIKRNGCTVIAVTGNASSWLAQEGDAHLFAGVPEEGG 153

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           P   AP  S + ++ I   L++ L   R  S  ++ + HPGG LG L
Sbjct: 154 PLDRAPRISVLAEILILQGLSVILQSVRGVSPEEYVMWHPGGALGQL 200


>gi|189201447|ref|XP_001937060.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984159|gb|EDU49647.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 278

 Score =  100 bits (250), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 102/169 (60%), Gaps = 12/169 (7%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+ K     G+++I G+GKSG +G K+ +T+ S G  S FVHAAEA HGDLG I ++D +
Sbjct: 85  AITKANEAGGKLIICGVGKSGLVGRKIEATMKSLGIASSFVHAAEALHGDLGDIRQNDAV 144

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH------ADIVLTLP-KEPES 168
           + +S+SG + EL A+L +    + P++AITS+ K    C         I+L  P  E E 
Sbjct: 145 LFISYSGKTGELMALLNHIPSHT-PILAITSQTKP-SDCQLLEDRPNAILLPAPIHELEE 202

Query: 169 CPHGL-APTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLG 214
              G+ APTTS  + +A+GD LA+ + E+  ++ +++ F   HPGG +G
Sbjct: 203 VSFGVCAPTTSTTVTIAVGDMLALTVAEALHQDGTKDVFRRNHPGGAIG 251


>gi|218131756|ref|ZP_03460560.1| hypothetical protein BACEGG_03377 [Bacteroides eggerthii DSM 20697]
 gi|317474629|ref|ZP_07933903.1| SIS domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
 gi|217986059|gb|EEC52398.1| hypothetical protein BACEGG_03377 [Bacteroides eggerthii DSM 20697]
 gi|316909310|gb|EFV30990.1| SIS domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 201

 Score =  100 bits (249), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHHKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A     ++  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPNLKFIVITGNPDSPLAQESDVCLSTGSPKEVCILGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMQRTGFTIEDYSKRHHGGYLG 192


>gi|255010248|ref|ZP_05282374.1| SIS-domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313148043|ref|ZP_07810236.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136810|gb|EFR54170.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 201

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMKRTEFTIEEYSKRHHGGYLG 192


>gi|53711463|ref|YP_097455.1| putative sugar isomerase [Bacteroides fragilis YCH46]
 gi|60679733|ref|YP_209877.1| SIS-domain-containing protein [Bacteroides fragilis NCTC 9343]
 gi|253564475|ref|ZP_04841932.1| SIS-domain-containing protein [Bacteroides sp. 3_2_5]
 gi|265764862|ref|ZP_06093137.1| SIS-domain-containing protein [Bacteroides sp. 2_1_16]
 gi|52214328|dbj|BAD46921.1| putative sugar isomerase [Bacteroides fragilis YCH46]
 gi|60491167|emb|CAH05915.1| putative sugar isomerase SIS-domain protein [Bacteroides fragilis
           NCTC 9343]
 gi|251948251|gb|EES88533.1| SIS-domain-containing protein [Bacteroides sp. 3_2_5]
 gi|263254246|gb|EEZ25680.1| SIS-domain-containing protein [Bacteroides sp. 2_1_16]
 gi|301161195|emb|CBW20733.1| putative sugar isomerase SIS-domain protein [Bacteroides fragilis
           638R]
          Length = 201

 Score =  100 bits (249), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMKRTEFTIEEYSKRHHGGYLG 192


>gi|167764055|ref|ZP_02436182.1| hypothetical protein BACSTE_02438 [Bacteroides stercoris ATCC
           43183]
 gi|167698171|gb|EDS14750.1| hypothetical protein BACSTE_02438 [Bacteroides stercoris ATCC
           43183]
          Length = 201

 Score =  100 bits (248), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPKLKFIVITGNPDSPLAQESDVCLSTGSPKEVCILGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMKKTGFTIEDYSKRHHGGYLG 192


>gi|319900498|ref|YP_004160226.1| Arabinose-5-phosphate isomerase [Bacteroides helcogenes P 36-108]
 gi|319415529|gb|ADV42640.1| Arabinose-5-phosphate isomerase [Bacteroides helcogenes P 36-108]
          Length = 201

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   +G++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKRGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A     ++  I IT    S +A  +D+ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPNLKFIVITGNPDSPLAHESDVCLSTGSPKEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVQTMKETGFTIEDYSKRHHGGYLG 192


>gi|167771699|ref|ZP_02443752.1| hypothetical protein ANACOL_03071 [Anaerotruncus colihominis DSM
           17241]
 gi|167666339|gb|EDS10469.1| hypothetical protein ANACOL_03071 [Anaerotruncus colihominis DSM
           17241]
          Length = 217

 Score =  100 bits (248), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 56/156 (35%), Positives = 82/156 (52%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +A  GRV ITGIGK GH+    AS ++STGTP++F+H  EA HG  G +   D++I +S 
Sbjct: 57  QAKGGRVHITGIGKPGHVSGYGASLMSSTGTPTYFLHGTEAVHGSCGQLAAGDVVICISN 116

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + E+K  +   +R    +I IT    S +A  +D  L      E  P   AP  S +
Sbjct: 117 SGETAEMKTTVTAIKRNGCKVIGITGNRTSWLARESDAHLFAGVRQEGGPLNRAPRASIL 176

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
            +  +   L++ L  +R     ++   HPGG LG L
Sbjct: 177 AETFVLQRLSVLLQVNRGLDPKEYVKWHPGGTLGQL 212


>gi|302337323|ref|YP_003802529.1| sugar isomerase (SIS) [Spirochaeta smaragdinae DSM 11293]
 gi|301634508|gb|ADK79935.1| sugar isomerase (SIS) [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score = 99.8 bits (247), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 82/151 (54%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV ITGIGK  H+   +AS  +STGTP++++H  EA HG  G +   D++I +S SG + 
Sbjct: 50  RVHITGIGKPAHVAEYMASLFSSTGTPAYYLHGTEAVHGSCGQLVPGDVVICISNSGETA 109

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ELKA +   ++    +I++T   KS +A   D  L      E  P   AP  S ++++ I
Sbjct: 110 ELKATVGAIKKNGCKIISVTGNPKSWLAQEGDAHLFAGVGKEGGPLDRAPRVSVLVEIFI 169

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              L+I L   R  +   + + HPGG LG L
Sbjct: 170 LQGLSIILQSIREVTPEQYIIWHPGGALGEL 200


>gi|213580562|ref|ZP_03362388.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 133

 Score = 99.8 bits (247), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 53/108 (49%), Positives = 72/108 (66%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA 
Sbjct: 21  SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEAL 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S
Sbjct: 81  HGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHS 128


>gi|56797557|emb|CAI38901.1| kpsF [Campylobacter jejuni]
          Length = 173

 Score = 99.4 bits (246), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/170 (35%), Positives = 96/170 (56%), Gaps = 7/170 (4%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+M 
Sbjct: 1   EACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMV 60

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNT 282
           S + +P+V       D + +++  R G + VV E +KL GIIT+GD+ R      K    
Sbjct: 61  SSN-LPIVHPDTEFNDLVDVMTSGRLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFD 118

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +++M  NPKV+  D + + A +++ +H I  ++V  + ++ +GI+  
Sbjct: 119 FRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEIIVGKE-ERVMGIIQL 167


>gi|313899731|ref|ZP_07833234.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312955346|gb|EFR37011.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 204

 Score = 99.4 bits (246), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 85/163 (52%), Gaps = 6/163 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV +TGIGK GH+    AS L+STGTP++ +H  EA HG  G +   D++I +S SG + 
Sbjct: 47  RVHVTGIGKPGHVAGYAASLLSSTGTPTYELHGTEAVHGSAGQVLSGDVVIAISNSGETT 106

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ELKA +   +     LIA+T +  S +A   D+ L      E       P  S + ++ +
Sbjct: 107 ELKATVETLKSNGAKLIALTGKADSWLAKQGDVTLIAGVNQEGDAMNKPPRASILAEMVM 166

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
             +L+I L  ++N +   +   HPGG LG      + +  SGD
Sbjct: 167 LQSLSILLQNAKNLTPQQYVKWHPGGSLG------ASIKESGD 203


>gi|329960671|ref|ZP_08299014.1| SIS domain protein [Bacteroides fluxus YIT 12057]
 gi|328532544|gb|EGF59338.1| SIS domain protein [Bacteroides fluxus YIT 12057]
          Length = 201

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   +G++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHRKRGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +++ L+     E C  G+ 
Sbjct: 93  LISNSGKTREIVELTRLAHNLNPDLKFIVITGNPDSPLAHESNVCLSTGHPDEVCTLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS      IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTAMTVIGDILVVQTMKETGFTIEDYSKRHHGGYLG 192


>gi|212692627|ref|ZP_03300755.1| hypothetical protein BACDOR_02124 [Bacteroides dorei DSM 17855]
 gi|237709063|ref|ZP_04539544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724454|ref|ZP_04554935.1| SIS-domain-containing protein [Bacteroides sp. D4]
 gi|265752586|ref|ZP_06088155.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212664912|gb|EEB25484.1| hypothetical protein BACDOR_02124 [Bacteroides dorei DSM 17855]
 gi|229437323|gb|EEO47400.1| SIS-domain-containing protein [Bacteroides dorei 5_1_36/D4]
 gi|229456759|gb|EEO62480.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235772|gb|EEZ21267.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 200

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V TG+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQIHRKKGKLVTTGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFSIPL--IAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  L  I IT    S +A  +DI L      E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPKLKYIVITGNADSPLARESDICLCTGHPDEVCALGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVETMKKTGFTIEEYSKRHHGGYLG 192


>gi|56797614|emb|CAI38888.1| kpsF [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 173

 Score = 99.0 bits (245), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 94/170 (55%), Gaps = 7/170 (4%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMH 225
           E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+M 
Sbjct: 1   EACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMV 60

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNT 282
           S + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K    
Sbjct: 61  SSN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFD 118

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +++M  NPKV+  D + + A +++ +H I  + VV    K +GI+  
Sbjct: 119 FRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKEI-VVSKEDKVVGIIQL 167


>gi|288906301|ref|YP_003431523.1| carbohydrate isomerase, KpsF/GutQ family [Streptococcus
           gallolyticus UCN34]
 gi|325979315|ref|YP_004289031.1| arabinose-5-phosphate isomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733027|emb|CBI14608.1| putative carbohydrate isomerase, KpsF/GutQ family [Streptococcus
           gallolyticus UCN34]
 gi|325179243|emb|CBZ49287.1| arabinose-5-phosphate isomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 199

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 86/150 (57%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK  H+   +++ L+STGTP++F+ A E+ HG  G + + D++I +S SG +
Sbjct: 44  GRVHVTGIGKPSHVSQYISALLSSTGTPAYFLDATESVHGSAGQVVKGDVVIAISNSGET 103

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL+  +   ++  + ++++T    S +A ++D  L    E E       P  S I ++ 
Sbjct: 104 LELQRTIEALKKLGVKIVSVTGGKSSWLAKNSDFALFAGVEEEGDSFNKPPRASIIAEIL 163

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           I  A++I L E  + +   +++ HPGG LG
Sbjct: 164 ILQAVSIVLQEKSHLNMEQYHLWHPGGSLG 193


>gi|150003839|ref|YP_001298583.1| putative sugar isomerase [Bacteroides vulgatus ATCC 8482]
 gi|254880936|ref|ZP_05253646.1| SIS-domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|294775005|ref|ZP_06740534.1| SIS domain protein [Bacteroides vulgatus PC510]
 gi|149932263|gb|ABR38961.1| putative sugar isomerase [Bacteroides vulgatus ATCC 8482]
 gi|254833729|gb|EET14038.1| SIS-domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|294451049|gb|EFG19520.1| SIS domain protein [Bacteroides vulgatus PC510]
          Length = 200

 Score = 99.0 bits (245), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V TG+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQIHRKKGKLVTTGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A     ++  I IT    S +A  +DI L      E C  G+ 
Sbjct: 93  LISNSGKTREIVELTQLAHNLNPNLKYIVITGNADSPLARESDICLCTGHPDEVCALGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVETMKKTGFTIEEYSKRHHGGYLG 192


>gi|319639944|ref|ZP_07994671.1| sugar isomerase [Bacteroides sp. 3_1_40A]
 gi|317388222|gb|EFV69074.1| sugar isomerase [Bacteroides sp. 3_1_40A]
          Length = 199

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V TG+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL++
Sbjct: 32  VEQIHRKKGKLVTTGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLLL 91

Query: 117 VLSWSGSSDELKAILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A     ++  I IT    S +A  +DI L      E C  G+ 
Sbjct: 92  LISNSGKTREIVELTQLAHNLNPNLKYIVITGNADSPLARESDICLCTGHPDEVCALGMT 151

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  ++   H GG LG
Sbjct: 152 PTTSTTVMTVIGDILVVETMKKTGFTIEEYSKRHHGGYLG 191


>gi|330922589|ref|XP_003299894.1| hypothetical protein PTT_10994 [Pyrenophora teres f. teres 0-1]
 gi|311326224|gb|EFQ92004.1| hypothetical protein PTT_10994 [Pyrenophora teres f. teres 0-1]
          Length = 278

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 101/169 (59%), Gaps = 12/169 (7%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+ K     G+++I G+GKSG +G K+ +T+ S G  S F+HAAEA HGDLG I ++D +
Sbjct: 85  AITKANEAGGKLIICGVGKSGLVGRKIEATMKSLGIASSFMHAAEALHGDLGDIRQNDAV 144

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH------ADIVLTLP-KEPES 168
           + +S+SG + EL A+L +    + P++AITS+ K    C         I+L  P  E E 
Sbjct: 145 LFISYSGKTGELMALLNHIPSHT-PILAITSQTKP-SDCQLLEDRPNAILLPAPIHELEE 202

Query: 169 CPHGL-APTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLG 214
              G+ APTTS  + +A+GD LA+ + E+  +  +++ F   HPGG +G
Sbjct: 203 VSFGVCAPTTSTTVTIAVGDMLALTVAEALHQEDTKDVFRRNHPGGAIG 251


>gi|224023563|ref|ZP_03641929.1| hypothetical protein BACCOPRO_00266 [Bacteroides coprophilus DSM
           18228]
 gi|224016785|gb|EEF74797.1| hypothetical protein BACCOPRO_00266 [Bacteroides coprophilus DSM
           18228]
          Length = 200

 Score = 98.6 bits (244), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 92/160 (57%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++   KG++V +G+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL++
Sbjct: 33  VEQVHEKKGKLVTSGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLML 92

Query: 117 VLSWSGSSDELKAILYYARRFSIPL--IAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   AR+ +  +  I IT    S +A  ADI L      E C  G+ 
Sbjct: 93  LISNSGKTREIVELTELARKLNPDMKKIVITGNPDSPLAQAADICLATGHPDEVCLLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  +    F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVETMRRTGFTIEEYSKRHHGGYLG 192


>gi|159124337|gb|EDP49455.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus A1163]
          Length = 426

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/219 (35%), Positives = 117/219 (53%), Gaps = 20/219 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-----GRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +   Q + A    + ++     G++V+ G+GKS
Sbjct: 31  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSRIVRTVRNGGKLVVCGVGKS 90

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 91  GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHIP 150

Query: 136 RFSIPLIAITS----ENKSVVACH-ADIVLTLPK---EPESCPHGL-APTTSAIMQLAIG 186
             + P+IAITS    +   +++ H +D+ + LP    E E    G+ APT+S  + LA+G
Sbjct: 151 S-TTPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 209

Query: 187 DALAIALLESRNFSEND-----FYVLHPGGKLGTLFVCA 220
           DALAIA     + +        F   HPGG +G     A
Sbjct: 210 DALAIATARRLHNTPGRGPAEVFKGFHPGGTIGAASAAA 248


>gi|32453539|ref|NP_861745.1| RB69ORF055c hypothetical protein [Enterobacteria phage RB69]
 gi|32350358|gb|AAP75957.1| RB69ORF055c hypothetical protein [Enterobacteria phage RB69]
          Length = 211

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 110/218 (50%), Gaps = 30/218 (13%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-----AIKGRVVITGIG 73
           MK + +  A+ +II +   L+++   +    + +++  +E ++       + RV+ITG+G
Sbjct: 1   MKTTPITIAIDAIIKQASSLAAMAKVISQNPA-RYNAILETLRRPGLSNYESRVIITGVG 59

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K+ +I +K + T AS G PS +++    SHGD G I  +D++I +S SG ++E+  +  +
Sbjct: 60  KNANIATKASETFASLGIPSMYLNTGHYSHGDAGFIAPNDVLIHISRSGKTEEMIGVAKH 119

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC--------------PHGLAPTTSA 179
            +     +  I      ++ C+ DI    P+E E+                + LAPT S 
Sbjct: 120 LKMIRPNVKQI------LLHCNPDI----PQENEALFDYSFCTGIAVEVDENSLAPTMST 169

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
            + LA+ D  AI L   R F+ NDF   HPGG LG + 
Sbjct: 170 TLLLALIDTFAINLSSERGFTSNDFLKFHPGGALGAML 207


>gi|82545115|ref|YP_409062.1| isomerase [Shigella boydii Sb227]
 gi|81246526|gb|ABB67234.1| putative isomerase [Shigella boydii Sb227]
 gi|320185288|gb|EFW60063.1| Arabinose 5-phosphate isomerase [Shigella flexneri CDC 796-83]
 gi|332091844|gb|EGI96922.1| SIS domain protein [Shigella boydii 3594-74]
          Length = 158

 Score = 98.2 bits (243), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 77/117 (65%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I
Sbjct: 36  IKILQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVI 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++S SG + E+ A L   ++    LI+    + S +A   D+ + +P + E+   GL
Sbjct: 96  LISNSGETAEILATLPSLKKMGNYLISFIRSHHSSLAISCDLSVEIPVKSEADNLGL 152


>gi|116197593|ref|XP_001224608.1| hypothetical protein CHGG_06952 [Chaetomium globosum CBS 148.51]
 gi|88178231|gb|EAQ85699.1| hypothetical protein CHGG_06952 [Chaetomium globosum CBS 148.51]
          Length = 416

 Score = 97.8 bits (242), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 96/167 (57%), Gaps = 21/167 (12%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V+ G+GKSGHI  KL +T  S    S F+H  EA HGDLG I+R D ++++++SG +
Sbjct: 114 GKLVVIGVGKSGHIAKKLVATFNSFAITSVFLHPTEALHGDLGQISRHDTLLMITFSGKT 173

Query: 125 DELKAILYYARRFSIPLIAITS----ENKSVVACHADIVLTLPK---EPESCPHGL-APT 176
            EL  +L +  + S+PL+ +TS    E   +V    D +L LP    E E+   G+ APT
Sbjct: 174 PELLTLLPHLDK-SLPLLILTSHIRPETCDLVRHRPDTIL-LPAPVHEAETASFGVAAPT 231

Query: 177 TSAIMQLAIGDALAIALLE------SRNFSENDFYVLHPGGKLGTLF 217
           TS  + LA+GDALA+ +        S  FS N     HPGG +G  F
Sbjct: 232 TSTTVALAVGDALAVVVSRELYPSVSSVFSRN-----HPGGAIGAAF 273


>gi|303239736|ref|ZP_07326260.1| sugar isomerase (SIS) [Acetivibrio cellulolyticus CD2]
 gi|302592673|gb|EFL62397.1| sugar isomerase (SIS) [Acetivibrio cellulolyticus CD2]
          Length = 206

 Score = 97.4 bits (241), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 84/152 (55%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGTP++ +H  EA HG  G +   D++I +S SG +
Sbjct: 48  GRVHVTGIGKPGHVSGYISSLLSSTGTPAYTLHGTEAVHGSAGQVVPGDVVIAISNSGET 107

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELK+ +   +     +I ++ +  S +A  +D  L      E  P   AP  S + ++ 
Sbjct: 108 AELKSTVMTVKNNGAYIIGVSGKKDSWIAKVSDAFLYAGVSEEGGPLNRAPRASILAEII 167

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           +  AL++ L  S+  + + +   HPGG LG L
Sbjct: 168 VLQALSVLLQCSKGLTPSQYVKWHPGGMLGIL 199


>gi|257870064|ref|ZP_05649717.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257804228|gb|EEV33050.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 204

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 53/155 (34%), Positives = 83/155 (53%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           K  KGRV +TGIGK  H+   +A+ L+STGTP++F+   E  HG  G   + D++I +S 
Sbjct: 40  KKKKGRVHVTGIGKPSHVAEYIAALLSSTGTPTYFLDGTETIHGSAGQAEKGDVVIAISN 99

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG ++ELK  L   +   I +I ++    S +  H+D  L      E  P    P  S +
Sbjct: 100 SGETEELKKSLLTLKALGIKVIGVSGGIDSWLQKHSDAFLFAGITNEGDPLNKPPRISIL 159

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
            ++ +  +L+I L +      +D+Y  HPGG LG+
Sbjct: 160 AEIIVLQSLSILLQQEAAIDIDDYYAWHPGGSLGS 194


>gi|46136863|ref|XP_390123.1| hypothetical protein FG09947.1 [Gibberella zeae PH-1]
          Length = 418

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 96/168 (57%), Gaps = 11/168 (6%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+ + ++  G++V+ G+GKSGHIG KL +T  S    + F+H  EA HGDLG++  +D +
Sbjct: 106 AITRQQSTNGKLVVIGVGKSGHIGQKLVATFKSLAIHAVFLHPTEALHGDLGIVGSNDTL 165

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC----HADIVLTLP---KEPES 168
           + +++SG + EL  +L +    S+P + +TS + +   C    H    + LP    EPE 
Sbjct: 166 MFITYSGKTQELLLMLPHLDE-SLPTVLLTS-HTTPDTCDFFKHRPNTILLPAPIPEPEK 223

Query: 169 CPHGL-APTTSAIMQLAIGDALAIALLESRNFSENDFYVL-HPGGKLG 214
              G+ APTTS  + LAIGDA+AI   +  N +    +   HPGG +G
Sbjct: 224 TSFGVSAPTTSTTVALAIGDAIAITAAKEMNANIASLFAKNHPGGAIG 271


>gi|169620064|ref|XP_001803444.1| hypothetical protein SNOG_13233 [Phaeosphaeria nodorum SN15]
 gi|111058440|gb|EAT79560.1| hypothetical protein SNOG_13233 [Phaeosphaeria nodorum SN15]
          Length = 277

 Score = 97.4 bits (241), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 100/163 (61%), Gaps = 15/163 (9%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++I G+GKSG +G K+ +T+ S G    F+HAAEA HGDLG I ++D+I+ +S+SG +
Sbjct: 92  GKLLICGVGKSGLVGRKMVATMKSLGIACSFMHAAEALHGDLGDIRKNDVILFISYSGKT 151

Query: 125 DELKAILYYARRFSIPLIAITS----ENKSVVACHADIVLTLPK---EPESCPHGL-APT 176
            EL A+L +    + P++AITS    E+  ++  H + VL LP    E E    G+ APT
Sbjct: 152 AELLALLPHIPTRT-PIVAITSHKRAEDCPLLQAHPNTVL-LPAPIHELEEVSFGVCAPT 209

Query: 177 TSAIMQLAIGDALAIALLESRNFSEND-----FYVLHPGGKLG 214
           TS  + +A+GD LA+ + E+   +E +     F   HPGG +G
Sbjct: 210 TSTTVTIAVGDMLALTVAEALYENEAEGMKDVFRRNHPGGAIG 252


>gi|198277373|ref|ZP_03209904.1| hypothetical protein BACPLE_03585 [Bacteroides plebeius DSM 17135]
 gi|198269871|gb|EDY94141.1| hypothetical protein BACPLE_03585 [Bacteroides plebeius DSM 17135]
          Length = 200

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 91/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE++    G++V +G+GK+G I   +A+T  STG PS F+H +EA HGDLG++ ++DL++
Sbjct: 33  VEQVHEKGGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFSIPL--IAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A R +  L  I IT    S +A  ADI L      E C  G+ 
Sbjct: 93  LISNSGKTREIVELTELAARLNPELKKIVITGNPDSPLAEAADICLATGHPDEVCLLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  +    F+  ++   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVETMRKTGFTIEEYSKRHHGGYLG 192


>gi|156055432|ref|XP_001593640.1| hypothetical protein SS1G_05068 [Sclerotinia sclerotiorum 1980]
 gi|154702852|gb|EDO02591.1| hypothetical protein SS1G_05068 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 402

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/182 (39%), Positives = 102/182 (56%), Gaps = 24/182 (13%)

Query: 53  FHCAVEKIK---AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           F  AVE IK     +G++VI G+GKSGHI  KL +T+ S   P+ F+HA EA HGD+G I
Sbjct: 98  FSHAVEAIKKSIGERGKLVICGVGKSGHIAQKLVATMRSLKIPAIFIHATEAVHGDVGAI 157

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH------ADIVLTLP 163
              D I+++++SG + EL  +L +    S+P+I +T  ++   +C         I+L  P
Sbjct: 158 GIYDTILLITFSGKTKELVDLLPHLDP-SLPMIVLTG-HRHRSSCEIINLRPKAILLPAP 215

Query: 164 -KEPESCPHGL-APTTSAIMQLAIGDALAIALLESRN------FSENDFYVLHPGGKLGT 215
             E E+   G  APTTS  M +A+GDALA+A     +      FS+N     HPGG +G 
Sbjct: 216 IHESETLSFGCSAPTTSTTMAIAVGDALALATARELHSDIAAVFSKN-----HPGGAIGA 270

Query: 216 LF 217
            F
Sbjct: 271 AF 272


>gi|303233125|ref|ZP_07319798.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
 gi|302480710|gb|EFL43797.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
          Length = 201

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 55/161 (34%), Positives = 84/161 (52%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           ++A  GRV +TGIGK GH+    AS  +STGTP++ +H  E  HG  G     D++I +S
Sbjct: 41  VQARGGRVHVTGIGKPGHVAGYAASLFSSTGTPTYELHGTECVHGSAGQTKPGDVVIAIS 100

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG + ELKA +   ++  + +IA+T +  S +A HAD+ L    + E       P  S 
Sbjct: 101 NSGETAELKATVSCLQKIGVHIIALTGKATSWLAQHADVALIAGVKQEGDSMNKPPRASI 160

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
           +++L     L+I L      +   +   HPGG LG   + A
Sbjct: 161 LVELIALQTLSILLQNEYELTPEQYVKWHPGGALGASILNA 201


>gi|164655369|ref|XP_001728814.1| hypothetical protein MGL_3981 [Malassezia globosa CBS 7966]
 gi|159102700|gb|EDP41600.1| hypothetical protein MGL_3981 [Malassezia globosa CBS 7966]
          Length = 244

 Score = 97.1 bits (240), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 110/222 (49%), Gaps = 24/222 (10%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAI-KGRVVITGIGKSG 76
           N+++  A   ++ E + L  L   LQ     + F     + +   +  G++V  G+GKSG
Sbjct: 20  NASLDTARSVLLREAQALHKLAEKLQQNDQAMRFAIELVLGRSSTLASGKIVTVGVGKSG 79

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYAR 135
            +  KLA+TL + GT + F+H  EA HGD+G++  + D ++ LS+SG S E+ A++   +
Sbjct: 80  FVAQKLAATLTALGTQAVFLHPIEALHGDIGILQAECDTVLALSYSGESLEVLALMQLPQ 139

Query: 136 RFSIPLIAITS-ENKSVV---------ACH------ADIVLT---LPKEPESCPHGLAPT 176
                 I +T+ E+  +V          CH       D+VL         E  P    PT
Sbjct: 140 VQRCAKIVMTANEHAQLVRLADAWLDCGCHDPMLKGTDVVLQGGFHTSSIEGWPEIPVPT 199

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
           TSAI  +AIGDA  +AL  ++      F+  HPGG LG + +
Sbjct: 200 TSAISMMAIGDAFCVALSHAKGVQRQTFHANHPGGNLGKVLL 241


>gi|293393449|ref|ZP_06637760.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291424050|gb|EFE97268.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 200

 Score = 97.1 bits (240), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 85/151 (56%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G++ +TG+G SG    K+A  LA    P+ F+ A +A+HGDLG +  DDL+I++S  G+
Sbjct: 43  RGKIAVTGVGTSGIAARKIAHMLACVEQPAIFLDATDAAHGDLGFLRADDLLIMISRGGN 102

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S+EL  +L       + LI++T    S +A  A +V+    + E  P  +  TTS ++ L
Sbjct: 103 SEELTRLLPTLAAKGVTLISVTENPDSAIARAAQLVIATGVKNEVDPLNMLATTSIVLVL 162

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           AI DA    L+    + ++    +HPGG +G
Sbjct: 163 AIFDAACACLMVRSGYDKDRLLAVHPGGNVG 193


>gi|333029479|ref|ZP_08457540.1| Arabinose-5-phosphate isomerase [Bacteroides coprosuis DSM 18011]
 gi|332740076|gb|EGJ70558.1| Arabinose-5-phosphate isomerase [Bacteroides coprosuis DSM 18011]
          Length = 201

 Score = 96.7 bits (239), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 57/160 (35%), Positives = 90/160 (56%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+++   KG++V +G+GK+G I   +A+T  STG P+ F+H +EA HGDLG++  +DL +
Sbjct: 33  VQQVHEKKGKLVTSGMGKAGQIAMNIATTFCSTGIPAVFLHPSEAQHGDLGILQENDLFL 92

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   AR  +  I  I IT    S +A  A + +      E C  G+ 
Sbjct: 93  MISNSGKTREIVELTRLARLLAPNIQFIVITGNLDSPLAKEASVAICTGNPKEVCLLGMT 152

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +  ++   F+  D+   H GG LG
Sbjct: 153 PTTSTTVMTVIGDILVVETMKKTGFTAADYSKRHHGGYLG 192


>gi|56783481|emb|CAI38734.1| kpsF [Campylobacter jejuni]
          Length = 172

 Score = 96.3 bits (238), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 96/169 (56%), Gaps = 7/169 (4%)

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAP +S    L +GDALA AL+++RNF  +DF + HPGG LG  L     D+M S
Sbjct: 1   ACPLQLAPMSSTTATLVMGDALAAALMKARNFKPDDFALFHPGGSLGRKLLTKVKDLMVS 60

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTL 283
            + +P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K     
Sbjct: 61  SN-LPIVHPDTEFNDLVDVMTSGKLG-LCVVLENKKLVGIITDGDLRRALKASDKPRFDF 118

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +++M  NPKV+  D + + A +++ ++ I  ++V  + +K +GI+  
Sbjct: 119 KAKEIMSTNPKVVDADAMASEAEEIMLKYKIKEIIVGKE-EKVVGIIQL 166


>gi|312216159|emb|CBX96110.1| hypothetical protein [Leptosphaeria maculans]
          Length = 438

 Score = 95.9 bits (237), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/160 (40%), Positives = 96/160 (60%), Gaps = 12/160 (7%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++I G+GKSG +G K+ +T+ S G  S F+HAAEA HGDLG I + D I+ +S+SG +
Sbjct: 256 GKLIICGVGKSGLVGRKMVATMKSLGIASSFLHAAEALHGDLGDIKKRDAIMFISYSGKT 315

Query: 125 DELKAILYYARRFSIPLIAITSENK----SVVACHADIVLTLPK---EPESCPHGL-APT 176
            EL A+L +      P++AITS  K     ++    + VL LP    E E    G+ APT
Sbjct: 316 AELMALLPHI-PLHTPILAITSHTKPSDCPLINQRPNAVL-LPAPIHELEEVSFGVCAPT 373

Query: 177 TSAIMQLAIGDALAIALLESRNFSEND--FYVLHPGGKLG 214
           TS  + +A+GD LA+ + E+ +  E +  F   HPGG +G
Sbjct: 374 TSTTVTIAVGDMLALTVAEALHEEETETVFRKNHPGGAIG 413


>gi|313634769|gb|EFS01207.1| SIS domain-containing protein [Listeria seeligeri FSL N1-067]
          Length = 200

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 92/160 (57%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V++G G SG    KL  +      P+ F+  ++A HG LG++ +DD++I
Sbjct: 37  VEKIANCTGKIVVSGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQQDDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T   +SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPESVIAKEADIFFPVSVAKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMTVIASFDAIIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|209870607|pdb|3ETN|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870608|pdb|3ETN|B Chain B, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870609|pdb|3ETN|C Chain C, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870610|pdb|3ETN|D Chain D, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
          Length = 220

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 2/160 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+I   KG++V +G GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++
Sbjct: 52  VEQIHRKKGKLVTSGXGKAGQIAXNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLL 111

Query: 117 VLSWSGSSDELKAILYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++S SG + E+  +   A   +  +  I IT    S +A  +D+ L+     E C  G  
Sbjct: 112 LISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGXT 171

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           PTTS  +   IGD L +   +   F+  ++   H GG LG
Sbjct: 172 PTTSTTVXTVIGDILVVQTXKRTEFTIEEYSKRHHGGYLG 211


>gi|310796048|gb|EFQ31509.1| SIS domain-containing protein [Glomerella graminicola M1.001]
          Length = 268

 Score = 95.9 bits (237), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 89/162 (54%), Gaps = 9/162 (5%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G+VV  G+GKSG I  KL +T +S G P+ F+H  EA HGDLG++   D +I++++SG 
Sbjct: 105 RGKVVFIGVGKSGWIAKKLTATFSSLGLPAVFLHPTEALHGDLGVVGEYDTLIMITFSGK 164

Query: 124 SDELKAILYYARRFSIPLIAITS----ENKSVVACHADIVLTLPKEPESCPHGL---APT 176
           + EL  +L +  +   PLI +TS    E   +     D++L     PES        APT
Sbjct: 165 TPELMLLLPHLNK-KCPLILLTSPTSMETCEIAKQRPDLILLPAPIPESEKDTFGVSAPT 223

Query: 177 TSAIMQLAIGDALA-IALLESRNFSENDFYVLHPGGKLGTLF 217
           TS  M +A+GDALA +A  E        F   HPGG +G  F
Sbjct: 224 TSTTMAIAVGDALAYVASKEMYPSVSAVFAKNHPGGAIGQAF 265


>gi|225683066|gb|EEH21350.1| polysialic acid capsule expression protein kpsF [Paracoccidioides
           brasiliensis Pb03]
          Length = 462

 Score = 95.5 bits (236), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/214 (36%), Positives = 119/214 (55%), Gaps = 22/214 (10%)

Query: 21  NSTVQCALRSIIAEKRGLSSLES-SLQGELSF-QFHCAVEKIKAI---KGRVVITGIGKS 75
           +S++  AL  I  E+  L+ LE   L  +L+      AV  I       G++VITG+GKS
Sbjct: 53  SSSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVISGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H +EA HGDLGMI  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPSEALHGDLGMIKPNDTVLLVTFSGKTPELLRLQPYLP 172

Query: 136 RFSIPLIAITSENK----SVVACHAD---IVLTLP-KEPESCPHGL-APTTSAIMQLAIG 186
             ++ +IAIT+  +     ++AC ++   I+L  P  E E    GL AP TS  + LA+G
Sbjct: 173 T-TVSIIAITAHMQPDLCPLLACSSNANSILLASPVHEHEEISFGLPAPMTSTTVALAVG 231

Query: 187 DALAIA------LLESRNFSENDFYVLHPGGKLG 214
           DALA+A       +  R  +E  F   HPGG +G
Sbjct: 232 DALALATARRLHTIPGRGPAEV-FKGFHPGGAIG 264


>gi|154302605|ref|XP_001551712.1| hypothetical protein BC1G_09879 [Botryotinia fuckeliana B05.10]
 gi|150855368|gb|EDN30560.1| hypothetical protein BC1G_09879 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score = 95.5 bits (236), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 22/181 (12%)

Query: 53  FHCAVEKIK---AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           F+ AV+ IK     +G++VI G+GKSG+I  KL +T+ S    + F+HA EA HGDLG I
Sbjct: 98  FNHAVDAIKRSIGERGKLVICGVGKSGYIAQKLVATMRSVAIQAVFIHATEAVHGDLGAI 157

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK----- 164
           T+ D I+++S+SG + EL  +L +    S+P+I +T         + +I+   PK     
Sbjct: 158 TKYDTILLVSFSGKTPELLELLPHLDP-SLPMIILTGHTHR---SNCEIIRRRPKTILLP 213

Query: 165 ----EPESCPHGL-APTTSAIMQLAIGDALAIALLESRNFSEN---DFYVLHPGGKLGTL 216
               EPE+   G  APTTS  M +A+GDALA+ +  +R    N    F   HPGG +G  
Sbjct: 214 APTFEPETVSFGCAAPTTSTTMAIAVGDALALVI--AREIHGNISTIFSKYHPGGAIGAA 271

Query: 217 F 217
           F
Sbjct: 272 F 272


>gi|323484822|ref|ZP_08090178.1| hypothetical protein HMPREF9474_01929 [Clostridium symbiosum
           WAL-14163]
 gi|323401818|gb|EGA94160.1| hypothetical protein HMPREF9474_01929 [Clostridium symbiosum
           WAL-14163]
          Length = 202

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/191 (30%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           AL +   E   ++ L  ++  E   +   AV  I   +GR++ TG G SG    K++   
Sbjct: 11  ALHTFANEANAVAKLADTVDRESYVK---AVRMIAECEGRIITTGCGTSGACAKKVSQVF 67

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                 S F++ A+A HGD GMI R D+II++S SG + E+  ++  A+     +I +T 
Sbjct: 68  NCVDRASQFLNPADAPHGDYGMIRRGDIIIIISKSGKTTEMINLIPVAKARGARIITVTE 127

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  +D+ L L   PE+CP+    TTS     A+ DA++I  +      +N F +
Sbjct: 128 NPGSPIALESDLNLILSTGPEACPYQCLSTTSVTAVFALFDAISIGCMLYNGIDKNYFKL 187

Query: 207 LHPGGKLGTLF 217
           +HP G +G + 
Sbjct: 188 VHPAGGVGAML 198


>gi|119470060|ref|XP_001258002.1| sugar isomerase, KpsF/GutQ [Neosartorya fischeri NRRL 181]
 gi|119406154|gb|EAW16105.1| sugar isomerase, KpsF/GutQ [Neosartorya fischeri NRRL 181]
          Length = 442

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/186 (38%), Positives = 110/186 (59%), Gaps = 15/186 (8%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCA---VEKIKAIK--GRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +   Q + A    + ++ ++  G++VI G+GKS
Sbjct: 48  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSQIVRTVRNGGKLVICGVGKS 107

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 108 GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHIP 167

Query: 136 RFSIPLIAITS----ENKSVVACH-ADIVLTLPK---EPESCPHGL-APTTSAIMQLAIG 186
             ++P+IAITS    +   +++ H +D+ + LP    E E    G+ APT+S  + LA+G
Sbjct: 168 S-TVPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 226

Query: 187 DALAIA 192
           DALAIA
Sbjct: 227 DALAIA 232


>gi|310793529|gb|EFQ28990.1| SIS domain-containing protein [Glomerella graminicola M1.001]
          Length = 418

 Score = 94.7 bits (234), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 100/177 (56%), Gaps = 21/177 (11%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AV + K  KG+++ITG+GKSGHI +KL +T  S    S F++  +A HGDLG+I   D+
Sbjct: 110 AAVTRHKGEKGKLIITGVGKSGHIANKLVATFNSLSIASVFLNPIDALHGDLGIIQEHDI 169

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENK----SVVACHADIVLTLPK---EPE 167
           ++ +++SG + EL  +L +  +    L+ +T   +     +V    D +L LP    E E
Sbjct: 170 LMFITFSGKTSELLGLLPHLDK-PWSLVILTGHTRPDTCELVKLRPDTIL-LPAPVHESE 227

Query: 168 SCPHGL-APTTSAIMQLAIGDALAIALLE------SRNFSENDFYVLHPGGKLGTLF 217
           +   G+ APTTS  + LA+GDALAIA  +      ++ FS N     HPGG +G  F
Sbjct: 228 TLSFGVSAPTTSTTVALAVGDALAIAAAQELHPNVAQVFSRN-----HPGGAIGAAF 279


>gi|311992578|ref|YP_004009446.1| hypothetical protein Ac42p084 [Acinetobacter phage Ac42]
 gi|298684361|gb|ADI96322.1| conserved hypothetical protein [Acinetobacter phage Ac42]
          Length = 213

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 87/160 (54%), Gaps = 4/160 (2%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +    RVVITG+GK+ ++ +K + T AS G PS +++    +HGD G I   D++I +S 
Sbjct: 46  RMYSNRVVITGVGKNANLAAKASETFASLGVPSLYLNTCHYAHGDAGFIGYSDVVIHVSR 105

Query: 121 SGSSDELKAILYYAR--RFSIPLIAITSENK--SVVACHADIVLTLPKEPESCPHGLAPT 176
           SG ++E++ +  + R  R  +  I ++  +     +    D V+ +P   E   + LAPT
Sbjct: 106 SGKTEEMQGMARHLRGIRPEVKQILLSCNDNLPEEMKEPFDFVMNVPGVVECDENKLAPT 165

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           +S  + LA+ D + I L +   F+  DF   HPGG LG +
Sbjct: 166 SSTTVLLALLDTIGINLSKEIGFTRQDFLTYHPGGSLGQM 205


>gi|171694451|ref|XP_001912150.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947174|emb|CAP73979.1| unnamed protein product [Podospora anserina S mat+]
          Length = 438

 Score = 94.0 bits (232), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 93/164 (56%), Gaps = 15/164 (9%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A  G++V+ G+GKSGHI  KL +T  S    + F+H  EA HGDLG I   D  +++++S
Sbjct: 134 ATDGKIVVIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDLGQIGPRDTFLLITFS 193

Query: 122 GSSDELKAILYYARRFSIPLIAITSENK----SVVACHADIVLTLPK---EPESCPHGL- 173
           G + EL  +L +  + S+PLI +TS  +     ++    D +L LP    EPE+   G+ 
Sbjct: 194 GKTPELLTLLPHLDK-SLPLILLTSHTRPETCELIKHRPDTIL-LPAPIHEPETKSFGVS 251

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL---HPGGKLG 214
           APTTS  + L +GDALAI  + SR    +   V    HPGG +G
Sbjct: 252 APTTSTTVALTVGDALAI--VASRELHPSVASVFAKNHPGGAIG 293


>gi|83766929|dbj|BAE57069.1| unnamed protein product [Aspergillus oryzae]
          Length = 455

 Score = 93.6 bits (231), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 27/234 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKI-KAIK-- 64
           S T+ GH+   +++V  A+  I  E+  L+ LE   +     Q     AV +I ++++  
Sbjct: 51  STTKDGHA---DASVSTAIHVISTERAALAHLERLYETNALAQESLARAVSQIARSVRSG 107

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG +
Sbjct: 108 GKLVCCGVGKSGKIAQKLEATMNSLGIYSAFLHPTEALHGDLGMIRPQDTLLLISFSGRT 167

Query: 125 DELKAILYYARRFSIPLIAITSE-NKSVVAC----HADIVLTLPK---EPESCPHGL-AP 175
            EL  +L +    ++P+IAITS  + S         +D+ + LP    E E    G+ AP
Sbjct: 168 PELLLLLPHIPS-TVPIIAITSHLHPSTCPLLSFQPSDMGILLPAPIHEDEELSIGVCAP 226

Query: 176 TTSAIMQLAIGDALAIALLESRNFSEND-----FYVLHPGGKLGTLFVCASDVM 224
           T+S  + L++GDALAIA     + S        F   HPGG +G     AS+V+
Sbjct: 227 TSSTTVALSLGDALAIATARRLHTSPGRGPAEIFKSFHPGGAIG----AASNVL 276


>gi|70991853|ref|XP_750775.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus Af293]
 gi|66848408|gb|EAL88737.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus Af293]
          Length = 426

 Score = 93.2 bits (230), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 107/186 (57%), Gaps = 15/186 (8%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-----GRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +   Q + A    + ++     G++V+ G+GKS
Sbjct: 31  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSRIVRTVRNGGKLVVCGVGKS 90

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 91  GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHIP 150

Query: 136 RFSIPLIAITS----ENKSVVACH-ADIVLTLPK---EPESCPHGL-APTTSAIMQLAIG 186
             + P+IAITS    +   +++ H +D+ + LP    E E    G+ APT+S  + LA+G
Sbjct: 151 S-TTPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 209

Query: 187 DALAIA 192
           DALAIA
Sbjct: 210 DALAIA 215


>gi|238501646|ref|XP_002382057.1| sugar isomerase, KpsF/GutQ [Aspergillus flavus NRRL3357]
 gi|317142753|ref|XP_001819071.2| sugar isomerase, KpsF/GutQ [Aspergillus oryzae RIB40]
 gi|220692294|gb|EED48641.1| sugar isomerase, KpsF/GutQ [Aspergillus flavus NRRL3357]
          Length = 447

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 27/234 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKI-KAIK-- 64
           S T+ GH+   +++V  A+  I  E+  L+ LE   +     Q     AV +I ++++  
Sbjct: 51  STTKDGHA---DASVSTAIHVISTERAALAHLERLYETNALAQESLARAVSQIARSVRSG 107

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG +
Sbjct: 108 GKLVCCGVGKSGKIAQKLEATMNSLGIYSAFLHPTEALHGDLGMIRPQDTLLLISFSGRT 167

Query: 125 DELKAILYYARRFSIPLIAITSE-NKSVVAC----HADIVLTLPK---EPESCPHGL-AP 175
            EL  +L +    ++P+IAITS  + S         +D+ + LP    E E    G+ AP
Sbjct: 168 PELLLLLPHIPS-TVPIIAITSHLHPSTCPLLSFQPSDMGILLPAPIHEDEELSIGVCAP 226

Query: 176 TTSAIMQLAIGDALAIALLESRNFSEND-----FYVLHPGGKLGTLFVCASDVM 224
           T+S  + L++GDALAIA     + S        F   HPGG +G     AS+V+
Sbjct: 227 TSSTTVALSLGDALAIATARRLHTSPGRGPAEIFKSFHPGGAIG----AASNVL 276


>gi|295658628|ref|XP_002789874.1| sugar isomerase [Paracoccidioides brasiliensis Pb01]
 gi|226282835|gb|EEH38401.1| sugar isomerase [Paracoccidioides brasiliensis Pb01]
          Length = 461

 Score = 93.2 bits (230), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 118/214 (55%), Gaps = 22/214 (10%)

Query: 21  NSTVQCALRSIIAEKRGLSSLES-SLQGELSF-QFHCAVEKIK---AIKGRVVITGIGKS 75
           ++++  AL  I  E+  L+ LE   L  +L+      AV  I    +  G++VITG+GKS
Sbjct: 53  STSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVSSGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H  EA HGDLGMI  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPTEALHGDLGMIKPNDTVLLVTFSGKTPELLRLQPYLP 172

Query: 136 RFSIPLIAITSENK----SVVACHAD---IVLTLP-KEPESCPHGL-APTTSAIMQLAIG 186
             ++ +IAIT+  +     ++ C ++   I+L  P  E E    GL AP TS  + LA+G
Sbjct: 173 T-TVSIIAITAHMQPDLCPLLTCSSNANSILLASPVHEHEEISFGLPAPMTSTTVALAVG 231

Query: 187 DALAIA------LLESRNFSENDFYVLHPGGKLG 214
           DALA+A       +  R  +E  F   HPGG +G
Sbjct: 232 DALALATARRLHTIPGRGPAEI-FKGFHPGGTIG 264


>gi|284800777|ref|YP_003412642.1| hypothetical protein LM5578_0525 [Listeria monocytogenes 08-5578]
 gi|284993963|ref|YP_003415731.1| hypothetical protein LM5923_0524 [Listeria monocytogenes 08-5923]
 gi|284056339|gb|ADB67280.1| hypothetical protein LM5578_0525 [Listeria monocytogenes 08-5578]
 gi|284059430|gb|ADB70369.1| hypothetical protein LM5923_0524 [Listeria monocytogenes 08-5923]
          Length = 200

 Score = 92.8 bits (229), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VEKIAECTGKIVVAGCGTSGVAAKKLVYSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|46906747|ref|YP_013136.1| SIS domain-containing protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093126|ref|ZP_00230902.1| SIS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|226223127|ref|YP_002757234.1| sugar-phosphate isomerase [Listeria monocytogenes Clip81459]
 gi|254824224|ref|ZP_05229225.1| SIS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|254853871|ref|ZP_05243219.1| SIS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|254933256|ref|ZP_05266615.1| SIS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|254992416|ref|ZP_05274606.1| sugar-phosphate isomerase [Listeria monocytogenes FSL J2-064]
 gi|255520977|ref|ZP_05388214.1| sugar-phosphate isomerase [Listeria monocytogenes FSL J1-175]
 gi|300765153|ref|ZP_07075139.1| hypothetical protein LMHG_11938 [Listeria monocytogenes FSL N1-017]
 gi|46880012|gb|AAT03313.1| SIS domain protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018499|gb|EAL09256.1| SIS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|225875589|emb|CAS04292.1| Putative sugar-phosphate isomerase [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258607256|gb|EEW19864.1| SIS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|293584816|gb|EFF96848.1| SIS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|293593457|gb|EFG01218.1| SIS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|300514124|gb|EFK41185.1| hypothetical protein LMHG_11938 [Listeria monocytogenes FSL N1-017]
 gi|328467571|gb|EGF38633.1| sugar-phosphate isomerase [Listeria monocytogenes 1816]
 gi|332310924|gb|EGJ24019.1| SIS domain protein [Listeria monocytogenes str. Scott A]
          Length = 200

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|323693812|ref|ZP_08108004.1| hypothetical protein HMPREF9475_02867 [Clostridium symbiosum
           WAL-14673]
 gi|323502115|gb|EGB17985.1| hypothetical protein HMPREF9475_02867 [Clostridium symbiosum
           WAL-14673]
          Length = 202

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 58/191 (30%), Positives = 97/191 (50%), Gaps = 3/191 (1%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           AL +   E   ++ L  ++  E   +   AV  I   +GR++ TG G SG    K++   
Sbjct: 11  ALHTFANEANAVAKLADTVDRESYVK---AVRMIAECEGRIITTGCGTSGACAKKVSQVF 67

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                 S F++ A+A HGD GMI + D+II++S SG + E+  ++  A+     +I +T 
Sbjct: 68  NCVDRASQFLNPADAPHGDYGMIRQGDIIIIISKSGKTTEMINLIPVAKARGARIITVTE 127

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  +D+ L L   PE+CP+    TTS     A+ DA++I  +      +N F +
Sbjct: 128 NPGSPIALESDLNLILSTGPEACPYQCLSTTSVTAVFALFDAISIGCMLYNGIDKNYFKL 187

Query: 207 LHPGGKLGTLF 217
           +HP G +G + 
Sbjct: 188 VHPAGGVGAML 198


>gi|16802545|ref|NP_464030.1| hypothetical protein lmo0502 [Listeria monocytogenes EGD-e]
 gi|224500402|ref|ZP_03668751.1| hypothetical protein LmonF1_12339 [Listeria monocytogenes Finland
           1988]
 gi|224502197|ref|ZP_03670504.1| hypothetical protein LmonFR_06702 [Listeria monocytogenes FSL
           R2-561]
 gi|254829405|ref|ZP_05234092.1| SIS domain-containing protein [Listeria monocytogenes FSL N3-165]
 gi|254830513|ref|ZP_05235168.1| hypothetical protein Lmon1_04092 [Listeria monocytogenes 10403S]
 gi|16409878|emb|CAC98581.1| lmo0502 [Listeria monocytogenes EGD-e]
 gi|258601819|gb|EEW15144.1| SIS domain-containing protein [Listeria monocytogenes FSL N3-165]
          Length = 200

 Score = 92.8 bits (229), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 90/160 (56%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|296416123|ref|XP_002837730.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633613|emb|CAZ81921.1| unnamed protein product [Tuber melanosporum]
          Length = 437

 Score = 92.4 bits (228), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 100/184 (54%), Gaps = 30/184 (16%)

Query: 53  FHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           F  AVE I       G+V+I G+GKSG IG K+ +T+ S G  S F+H  EA HGDLGM+
Sbjct: 87  FVRAVEAISTAVVKGGKVIIIGVGKSGKIGEKMVATMNSLGLLSVFMHPIEALHGDLGMV 146

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-----------ENKSVVACHADI 158
              D+++++++SG++ EL ++L +     +PLIA+TS           E K  +   A I
Sbjct: 147 KPKDVLLLITFSGNTPELISLLPHLPGH-LPLIALTSHISYHTSPLTRERKKAILLPAPI 205

Query: 159 VLTLPKEPESCPHGL-APTTSAIMQLAIGDALAIALLESRNFSEND-------FYVLHPG 210
                 E E    G+ APTTS  + LA+GDALA+  + +R+    D       F   HPG
Sbjct: 206 -----HEAEETSFGISAPTTSTTVALALGDALAV--VSARHVYTGDGEKPKDVFKRNHPG 258

Query: 211 GKLG 214
           G +G
Sbjct: 259 GAIG 262


>gi|16799577|ref|NP_469845.1| hypothetical protein lin0502 [Listeria innocua Clip11262]
 gi|16412942|emb|CAC95734.1| lin0502 [Listeria innocua Clip11262]
 gi|313620420|gb|EFR91812.1| SIS domain-containing protein [Listeria innocua FSL S4-378]
          Length = 200

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 86/158 (54%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S  G++ EL  ++   +     LI +T   +SV+A  ADI   +  + E  P  +  T
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPESVIANEADIFFPVSVKKEPDPFNMLAT 156

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 157 ASTMAVIASFDAIIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|322832397|ref|YP_004212424.1| sugar isomerase (SIS) [Rahnella sp. Y9602]
 gi|321167598|gb|ADW73297.1| sugar isomerase (SIS) [Rahnella sp. Y9602]
          Length = 202

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 85/155 (54%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +    G++ +TG+G SG    K+A  LA    P+ ++ A +A+HGDLG +  +DL+I++S
Sbjct: 40  VTGCTGKIAVTGVGTSGIAARKIAHMLACVEQPAVYLSATDAAHGDLGFMRSNDLMILIS 99

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
             G+S+EL  +L   +   + +I++T    S +A  A +V+      E  P  +  TTS 
Sbjct: 100 RGGNSEELTRLLPTLKAKGVAIISVTENLDSAIARAATLVVKTHIRREIDPLNMLATTSV 159

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ++ LA+ DAL   ++    F +     +HPGG +G
Sbjct: 160 VLVLAVFDALCGNIMLRNGFDQQSLLKVHPGGNVG 194


>gi|238853606|ref|ZP_04643975.1| SIS domain protein [Lactobacillus gasseri 202-4]
 gi|238833750|gb|EEQ26018.1| SIS domain protein [Lactobacillus gasseri 202-4]
          Length = 198

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/182 (30%), Positives = 98/182 (53%), Gaps = 3/182 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E + +S L +SL  +   +    V+KI + KG +++TG G S     K   TL   G   
Sbjct: 13  EGQEISKLANSLATK---EIETLVDKIASCKGNILLTGCGTSAMDAKKATHTLNVVGIRG 69

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F+++ ++A HG LG+I+  D++I +S  GS+ EL   +   ++    +I IT   KSV+ 
Sbjct: 70  FYLNPSDAVHGSLGVISYKDIVIFISKGGSTKELTDFVSNIQKKKAYIILITENPKSVLG 129

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD+V+ +  + E     +  TTS++  +++ D +A  L++  NF++  F + HP G +
Sbjct: 130 RSADLVVKVKVDHEIDEFNMLATTSSLAVISLFDVVACILMKKENFTKKTFLLNHPSGNV 189

Query: 214 GT 215
           G 
Sbjct: 190 GN 191


>gi|313624969|gb|EFR94870.1| SIS domain-containing protein [Listeria innocua FSL J1-023]
          Length = 200

 Score = 92.0 bits (227), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 91/160 (56%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I    G++V++G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VETIAECTGKIVVSGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T   +SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPESVIANEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|145244665|ref|XP_001394638.1| sugar isomerase, KpsF/GutQ [Aspergillus niger CBS 513.88]
 gi|134079328|emb|CAK96957.1| unnamed protein product [Aspergillus niger]
          Length = 443

 Score = 91.7 bits (226), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/213 (36%), Positives = 115/213 (53%), Gaps = 20/213 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCA---VEKIKAIK--GRVVITGIGKS 75
            + V  AL+ I AE+  L+ LE   Q +   Q + A    + ++ IK  G++V  G+GKS
Sbjct: 49  TAPVTSALQVIAAERAALAHLEHIYQTDPLAQDNLARAVAQIVRTIKYGGKLVCCGVGKS 108

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG + EL  +L +  
Sbjct: 109 GKIAQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLLISFSGRTPELLLMLPHIP 168

Query: 136 RFSIPLIAITSENKS----VVACHAD---IVLTLP-KEPESCPHGL-APTTSAIMQLAIG 186
             ++ +IAITS   S    +++ H     I+L  P  E E    G+ APT+S  + L++G
Sbjct: 169 S-TVTVIAITSHMVSSTCPLLSFHPSNMGILLPAPIHEDEETSIGVCAPTSSTTVALSLG 227

Query: 187 DALAIALLESRNFSEND-----FYVLHPGGKLG 214
           DALAIA     + +        F   HPGG +G
Sbjct: 228 DALAIATARRLHTAPGRGPAEIFKGFHPGGAIG 260


>gi|218283016|ref|ZP_03489118.1| hypothetical protein EUBIFOR_01704 [Eubacterium biforme DSM 3989]
 gi|218216210|gb|EEC89748.1| hypothetical protein EUBIFOR_01704 [Eubacterium biforme DSM 3989]
          Length = 200

 Score = 91.7 bits (226), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 7/166 (4%)

Query: 56  AVEKIKAI------KG-RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           AVEK   I      KG RV +TGIGK GH+   +AS L+STGTP++ +H  EA HG  G 
Sbjct: 27  AVEKAADIIMDAESKGNRVHVTGIGKPGHVAGYVASLLSSTGTPTYELHGTEAVHGSSGQ 86

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +   D++I +S SG + EL+A +         +I+ T  ++S +A  +++ L    + E 
Sbjct: 87  VLPGDVVIAISNSGETTELQATVNTLLANGAHIISCTGNDQSTLAKASEVCLKAHVDKEG 146

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
                 P  S I ++ +   L+  L E +N + N +   HPGG LG
Sbjct: 147 DSLNKPPRASIIAEIIVLQTLSDVLEERKNLTLNQYVKWHPGGSLG 192


>gi|225569913|ref|ZP_03778938.1| hypothetical protein CLOHYLEM_06008 [Clostridium hylemonae DSM
           15053]
 gi|225161383|gb|EEG74002.1| hypothetical protein CLOHYLEM_06008 [Clostridium hylemonae DSM
           15053]
          Length = 284

 Score = 91.3 bits (225), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 104/208 (50%), Gaps = 3/208 (1%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G ++ +   +    R+I+ E   + +L   L  E + +    VE I   KG+VV+ G G 
Sbjct: 66  GMAMDRKDIISEVKRTILEESEAIRALSGQLDMEKAARL---VELIGDGKGKVVVAGCGT 122

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S     K+  +L      + F+  ++A HG LG++  +D++I++S  G+++EL  ++   
Sbjct: 123 SAMAARKVVHSLNCIECTAVFLTPSDAVHGGLGVLKENDILILISKGGNTEELVQLIPPC 182

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           R     L+ +T +  S +   AD+ L +    E C   +  T S +  L++ DA+ IAL+
Sbjct: 183 RSKGAVLVGVTEDEASKIGKAADLCLQVKAGREPCRFNMLATASTLAVLSVFDAVCIALM 242

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASD 222
           +   +++  F V+HP G +G   +   D
Sbjct: 243 QYTEYTKEQFAVIHPKGAVGERLLGKED 270


>gi|85089259|ref|XP_957909.1| hypothetical protein NCU10063 [Neurospora crassa OR74A]
 gi|28919183|gb|EAA28673.1| predicted protein [Neurospora crassa OR74A]
          Length = 538

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/178 (39%), Positives = 101/178 (56%), Gaps = 18/178 (10%)

Query: 53  FHCAVEKI------KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           FH AV+ I          G++VI G+GKSGHI  KL +T  S    + F+H  EA HGDL
Sbjct: 105 FHRAVDAIVRRQGDHGRNGKLVIIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDL 164

Query: 107 GMI-TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS----VVACHADIVLT 161
           G I +R+D ++++++SG + EL  +L +  + S+PLI +TS  +     +V    D +L 
Sbjct: 165 GQINSRNDTLMLITFSGKTPELLLLLPHLDQ-SLPLILLTSHTRPETCEIVRQRPDTIL- 222

Query: 162 LP---KEPESCPHGL-APTTSAIMQLAIGDALA-IALLESRNFSENDFYVLHPGGKLG 214
           LP    EPE+   G+ APTTS  + L++GDALA +A  E        F   HPGG +G
Sbjct: 223 LPAPIHEPETKSFGVSAPTTSTTVALSVGDALAMVASHELHPSVSKVFAKNHPGGAIG 280


>gi|115400459|ref|XP_001215818.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191484|gb|EAU33184.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 450

 Score = 90.9 bits (224), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/210 (35%), Positives = 114/210 (54%), Gaps = 20/210 (9%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCA--VEKIK-AIK--GRVVITGIGKSGHI 78
           V  A++ +  E+  L+ LE+  +     Q + A  V +I  +I+  G++V  G+GKSG I
Sbjct: 66  VTTAIQVLSTERAALAHLENLYETNPLAQENLARAVGQIAHSIRHGGKLVCCGVGKSGKI 125

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG + EL+ +L +    +
Sbjct: 126 AQKLEATMNSLGVYSAFLHPTEALHGDLGMIRPHDTLLLISFSGRTPELQLLLPHIPS-T 184

Query: 139 IPLIAIT-----SENKSVVACHADIVLTLPK---EPESCPHGL-APTTSAIMQLAIGDAL 189
           +P+IAIT     S    ++    D+ + LP    E E    G+ APT+S  + LA+GDAL
Sbjct: 185 VPVIAITAHLHPSTCPLLLIPPPDMCILLPAPIHEDEESSFGVSAPTSSTTVALALGDAL 244

Query: 190 AIALLESRNFSEND-----FYVLHPGGKLG 214
           AIA     + S        F   HPGG +G
Sbjct: 245 AIATARRLHTSPGRGPAEVFKSFHPGGAIG 274


>gi|290894373|ref|ZP_06557337.1| SIS domain-containing protein [Listeria monocytogenes FSL J2-071]
 gi|290556080|gb|EFD89630.1| SIS domain-containing protein [Listeria monocytogenes FSL J2-071]
          Length = 200

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|47094728|ref|ZP_00232343.1| SIS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|254900272|ref|ZP_05260196.1| hypothetical protein LmonJ_10675 [Listeria monocytogenes J0161]
 gi|254911174|ref|ZP_05261186.1| SIS domain-containing protein [Listeria monocytogenes J2818]
 gi|254935502|ref|ZP_05267199.1| SIS domain-containing protein [Listeria monocytogenes F6900]
 gi|255025881|ref|ZP_05297867.1| hypothetical protein LmonocytFSL_05230 [Listeria monocytogenes FSL
           J2-003]
 gi|47016868|gb|EAL07786.1| SIS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|258608079|gb|EEW20687.1| SIS domain-containing protein [Listeria monocytogenes F6900]
 gi|293589101|gb|EFF97435.1| SIS domain-containing protein [Listeria monocytogenes J2818]
          Length = 200

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 89/160 (55%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|255657585|ref|ZP_05402994.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-23m63]
 gi|296452735|ref|ZP_06894425.1| probable sugar-phosphate isomerase [Clostridium difficile NAP08]
 gi|296880011|ref|ZP_06903981.1| probable sugar-phosphate isomerase [Clostridium difficile NAP07]
 gi|296258425|gb|EFH05330.1| probable sugar-phosphate isomerase [Clostridium difficile NAP08]
 gi|296428988|gb|EFH14865.1| probable sugar-phosphate isomerase [Clostridium difficile NAP07]
          Length = 199

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 79/150 (52%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGTP++ +H  EA HG  G +   D++I +S SG +
Sbjct: 43  GRVHVTGIGKPGHVSGYISSLLSSTGTPAYILHGTEAVHGSSGQVVEGDVVIAISNSGET 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELK  L   +     +I ++    S +   +DI L    + E      AP  S + +  
Sbjct: 103 QELKGTLETLKINGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETI 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +  +L++AL  ++  +   +   HP G LG
Sbjct: 163 VLQSLSVALQYAKGLNTQQYLKWHPAGSLG 192


>gi|255932281|ref|XP_002557697.1| Pc12g08670 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582316|emb|CAP80494.1| Pc12g08670 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 437

 Score = 90.5 bits (223), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 111/186 (59%), Gaps = 16/186 (8%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCA--VEKI-KAIK--GRVVITGIGKSG 76
           S+V  A+  I  E+  L+ LE   Q +   Q   A  V++I ++++  G++V+ G+GKSG
Sbjct: 29  SSVVTAIHVISTERAALAHLEHIYQTDARAQHDLARAVDRITQSVREGGKLVVCGVGKSG 88

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G K+ +T+ S G  S F+H  EA HGDLG++  +D ++++S+SG S EL ++L +   
Sbjct: 89  KVGRKIEATMNSLGVYSAFLHPTEALHGDLGLVRPNDTVLLISFSGRSPELLSLLPHL-P 147

Query: 137 FSIPLIAITSENK----SVVACHAD----IVLTLP-KEPESCPHGL-APTTSAIMQLAIG 186
            ++P+IA+TS        +++ H      I+L  P  E E    G+ APT+S  + L++G
Sbjct: 148 ATVPVIALTSHTHPASCPLLSLHGPLGMGILLPAPIHEDEEASFGVRAPTSSTTVALSLG 207

Query: 187 DALAIA 192
           DALAIA
Sbjct: 208 DALAIA 213


>gi|311993357|ref|YP_004010222.1| hypothetical protein Acj9p085 [Acinetobacter phage Acj9]
 gi|295917314|gb|ADG59985.1| conserved hypothetical protein [Acinetobacter phage Acj9]
          Length = 211

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/161 (34%), Positives = 84/161 (52%), Gaps = 12/161 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ ITG+GK+ ++ +K + T AS G PS +++    SHGD G I   D++I +S SG +D
Sbjct: 50  RIAITGVGKNANMAAKASETFASLGIPSMYLNTCHYSHGDAGFIGHTDVVIHVSRSGKTD 109

Query: 126 ELKAILYYAR--RFSIPLI------AITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           E++ +  + R  R  +  I       +T E K+      DI   +P   E   H LAPTT
Sbjct: 110 EMQYMAKHLRTIRPDVKQILLHCNDNLTDEQKAPF----DIEFGIPGIVECDQHHLAPTT 165

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
           S  + LA+ D + I L     F+  +F   HPGG LG +  
Sbjct: 166 STTVLLALLDTIGIILSRHIEFTPPEFLKYHPGGALGAMLA 206


>gi|150951409|ref|XP_001387728.2| Polysialic acid capsule expression protein [Scheffersomyces
           stipitis CBS 6054]
 gi|149388570|gb|EAZ63705.2| Polysialic acid capsule expression protein [Pichia stipitis CBS
           6054]
          Length = 388

 Score = 90.1 bits (222), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/199 (34%), Positives = 107/199 (53%), Gaps = 22/199 (11%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
           +++LQ  L+  +H +    +   G++VI+GIGKS  I +KL +TL S    S  +H +EA
Sbjct: 35  QNNLQESLNILYHTS----QVAHGKIVISGIGKSHKIANKLVATLNSLSIHSSTLHPSEA 90

Query: 102 SHGDLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI-- 158
            HGDLG+I  D D +++L+ SG++ EL  +L +    SIP+I +T    S ++ H  +  
Sbjct: 91  LHGDLGLINEDKDCLVLLTASGNTSELLQLLPHLSP-SIPIILLTCNRDSKLSNHPQVNS 149

Query: 159 --VLTLPKE-PESCPHGL-APTTSAIMQLAIGDALAIALLESRNFSEND-------FYVL 207
               +LP    E   HGL APT S  + L + DA  +AL E     E D       F + 
Sbjct: 150 LLYASLPSYLNEETIHGLPAPTVSTTLSLILADATILALSE---MIEEDVLKRKKQFSMK 206

Query: 208 HPGGKLGTLFVCASDVMHS 226
           HPGG +G+     +D +++
Sbjct: 207 HPGGSIGSYLSHLNDNLNT 225


>gi|315640464|ref|ZP_07895574.1| arabinose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
 gi|315483824|gb|EFU74310.1| arabinose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
          Length = 203

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 88/166 (53%), Gaps = 3/166 (1%)

Query: 52  QFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           Q + A + I A K   GR+ ITGIGK  H+   + +  +STGTP +F+   EA HG  G 
Sbjct: 28  QLNRARQLIGAAKEQHGRLHITGIGKPSHVAEYMCALFSSTGTPCYFLDGTEAVHGSAGQ 87

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  +D++I +S SG++ EL+  +   +R  + +I++T    S +A + + VL    + E 
Sbjct: 88  VLPEDVVIAISNSGNTIELRNTVEALQRMGVKIISVTGNLSSWLAKNTEAVLFAGVQNEG 147

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
                 P  S + ++ +   L+I L E   F+   + + HPGG LG
Sbjct: 148 DDTNKPPRLSIVAEIIVLQCLSILLQEDTAFTMEKYAMWHPGGALG 193


>gi|260942641|ref|XP_002615619.1| hypothetical protein CLUG_04501 [Clavispora lusitaniae ATCC 42720]
 gi|238850909|gb|EEQ40373.1| hypothetical protein CLUG_04501 [Clavispora lusitaniae ATCC 42720]
          Length = 372

 Score = 90.1 bits (222), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 70/232 (30%), Positives = 120/232 (51%), Gaps = 38/232 (16%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---------GRVVITGI 72
           S V+    ++++E+  L++L      + S    C VE + A++         G++V  G+
Sbjct: 12  SAVKSVQSTLVSERDALANL----AAQYSENIDCQVELVNALRLFYETHLRGGKIVACGV 67

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKS  I +K  +TL S    +  +H  EA HGDLG+IT  D +   + SG++ EL A+L 
Sbjct: 68  GKSYKIATKTVATLKSLSISTDILHPTEALHGDLGLITERDCLFFFTASGNTPELLALLP 127

Query: 133 YARRFSIPLIAITSENKSVVACHADIV-----LTLPKE-PESCPHGL-APTTSAIMQLAI 185
           +    S+P++ ++   +S ++  +++V     + LP    E+  HG+ APT S  +QL +
Sbjct: 128 HIPA-SVPIVLLSCNRESKLS-KSNVVKSLLQIDLPDHLKETTVHGVPAPTVSTTLQLVM 185

Query: 186 GDALAIALLESRNFSEND-------FYVLHPGGKLGTLFVCASDVMHSGDSI 230
            D++ +AL E     END       F + HPGG +G      SD+ H  D++
Sbjct: 186 ADSVVLALAE---MIENDHIKRKKKFSMKHPGGSIG------SDLSHLNDNL 228


>gi|289618778|emb|CBI54603.1| unnamed protein product [Sordaria macrospora]
          Length = 489

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 64/161 (39%), Positives = 95/161 (59%), Gaps = 12/161 (7%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI-TRDDLIIVLSWSG 122
            G++V+ G+GKSGHI  KL +T  S    + F+H  EA HGDLG I +R+D ++++++SG
Sbjct: 124 NGKLVVIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDLGQINSRNDTLLLITFSG 183

Query: 123 SSDELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPK---EPESCPHGL-A 174
            + EL  +L +  + S+PLI +TS  +     +V    D +L LP    EPE+   G+ A
Sbjct: 184 KTPELLLLLPHLDK-SLPLILLTSHTRPETCEIVRQRPDTIL-LPAPIHEPETKSFGVSA 241

Query: 175 PTTSAIMQLAIGDALA-IALLESRNFSENDFYVLHPGGKLG 214
           PTTS  + L++GDALA +A  E        F   HPGG +G
Sbjct: 242 PTTSTTVALSVGDALAMVASHELHPSVSKVFAKNHPGGAIG 282


>gi|213857704|ref|ZP_03384675.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 81

 Score = 89.4 bits (220), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 42/68 (61%), Positives = 56/68 (82%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +G+VV++ IGKSGHIG K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG 
Sbjct: 5   EGKVVVSVIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGG 64

Query: 124 SDELKAIL 131
           + EL  I+
Sbjct: 65  AKELDLII 72


>gi|326204739|ref|ZP_08194594.1| sugar isomerase (SIS) [Clostridium papyrosolvens DSM 2782]
 gi|325985110|gb|EGD45951.1| sugar isomerase (SIS) [Clostridium papyrosolvens DSM 2782]
          Length = 214

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 81/151 (53%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV ITGIGK  H+   +AS L+STGTP++ +H  EA HG  G +   D++I +S SG + 
Sbjct: 56  RVHITGIGKPAHVAGYIASLLSSTGTPAYELHGTEAVHGSSGQVKPGDVVIAISNSGETA 115

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   +   +     +I++T + +S +A ++++ L      E      AP  S + ++ I
Sbjct: 116 ELVGTVTTLKNNGAKIISVTGKKESWLAKNSEVFLYAGVSSEGDYLNRAPRASILAEIFI 175

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              L+I L   +N +   +   HPGG LG L
Sbjct: 176 LQGLSILLQCKKNVTPEQYIKWHPGGALGKL 206


>gi|222447135|pdb|3FXA|A Chain A, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447136|pdb|3FXA|B Chain B, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447137|pdb|3FXA|C Chain C, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447138|pdb|3FXA|D Chain D, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
          Length = 201

 Score = 89.0 bits (219), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 4/161 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 38  VEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 97

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI   +++ KEP+  P    
Sbjct: 98  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPD--PFNXL 155

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
            T S    +A  DA+ + L    N+++  F V+HPGG +G 
Sbjct: 156 ATASTXAVIASFDAVIVCLXTYXNYTKEQFSVIHPGGAVGN 196


>gi|257785080|ref|YP_003180297.1| sugar isomerase (SIS) [Atopobium parvulum DSM 20469]
 gi|257473587|gb|ACV51706.1| sugar isomerase (SIS) [Atopobium parvulum DSM 20469]
          Length = 202

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 4/170 (2%)

Query: 49  LSFQFHCAVEKI----KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           + F+   A +K+    +A  GR+ +TGIGK GH+    AS  +STGTP++ +H  E  HG
Sbjct: 26  IDFEALSAAKKLILDAEAKGGRLHVTGIGKPGHVSGYAASLFSSTGTPTYELHGTECVHG 85

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
             G     D++I +S SG + ELKA +   +   + +IA+T    S +A  A++ L    
Sbjct: 86  SAGQTRPGDVVIAISNSGETGELKATVTCLKNVGVHIIALTGNPNSWLANEAEVALIAGV 145

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           E E       P  S + ++     L+I L      +   +   HPGG LG
Sbjct: 146 EQEGDSMNKPPRASILAEIMELQCLSILLQNEYGLNPEQYVKWHPGGALG 195


>gi|217965412|ref|YP_002351090.1| SIS domain protein [Listeria monocytogenes HCC23]
 gi|217334682|gb|ACK40476.1| SIS domain protein [Listeria monocytogenes HCC23]
 gi|307570032|emb|CAR83211.1| SIS domain protein [Listeria monocytogenes L99]
          Length = 200

 Score = 89.0 bits (219), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/160 (31%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE I    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV--LTLPKEPESCPHGLA 174
           ++S  G++ EL  ++   +     LI  T    SV+A  ADI   +++ KEP+  P  + 
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGATENPDSVIAKEADIFFPVSVSKEPD--PFNML 154

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            T S +  +A  DA+ + L+   N+++  F V+HPGG +G
Sbjct: 155 ATASTMAVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVG 194


>gi|309777489|ref|ZP_07672443.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914729|gb|EFP60515.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 200

 Score = 88.2 bits (217), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 80/150 (53%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GR+ +TGIGK GH+   +AS L+STGT ++ +H  EA HG  G + + D++I +S SG +
Sbjct: 43  GRIHVTGIGKPGHVAGYIASLLSSTGTSAYELHGTEAVHGSSGQVKKGDVVIAISNSGET 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL+A +         +I+ T   +S +A  +++ L    + E       P  S + ++ 
Sbjct: 103 MELEATVQTLLANGAHIISCTGNPQSTLAKQSEVCLVAHVDEEGDELNKPPRASILSEIL 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           I   L++ L E++      +   HPGG LG
Sbjct: 163 ILQCLSVVLQEAKKLDLKQYVKWHPGGSLG 192


>gi|294655797|ref|XP_457993.2| DEHA2C07150p [Debaryomyces hansenii CBS767]
 gi|199430613|emb|CAG86051.2| DEHA2C07150p [Debaryomyces hansenii]
          Length = 388

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/163 (38%), Positives = 90/163 (55%), Gaps = 17/163 (10%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV++GIGKS  I SKL +TL S    S  +HA+E  HGDLG+I  +D +I ++ SG++
Sbjct: 60  GKVVVSGIGKSFKISSKLVATLNSLSIQSAALHASEGLHGDLGIIRDNDTLIFVTASGNT 119

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADI----VLTLPKE-PESCPHGL-APTTS 178
            EL  +L +  + SIP+I +T    S ++ H  +       LP    E   HG+ APT S
Sbjct: 120 PELLQLLPHIPK-SIPIILLTCNRNSKLSNHPQVKSLLYADLPSNLNEESIHGIPAPTVS 178

Query: 179 AIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLG 214
           A + + + DA  +AL E     E D       F + HPGG +G
Sbjct: 179 ATLSMVLADATILALSE---MLEEDALKRKKLFSMKHPGGSIG 218


>gi|189211599|ref|XP_001942129.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979328|gb|EDU45954.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 251

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/191 (34%), Positives = 98/191 (51%), Gaps = 36/191 (18%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V  + A  GRVV+ G+GKSGH+G KLA T  S G  + F+HAA+A HGDLG +   DL++
Sbjct: 33  VTNVHAQDGRVVVCGLGKSGHVGRKLAGTPKSLGVSAGFLHAAQAVHGDLGDVRGADLLL 92

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS----------ENKSVVACHA---------- 156
            +S+SG + EL  +L +     +P+I +T           + + VV  +           
Sbjct: 93  FVSFSGRARELLNVLPHVAP-KVPVIVLTGHADASTCPLLKGRKVVGSNEGRRGGGEGEE 151

Query: 157 -------DIVLTLP---KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                   ++L  P    E ES   G APTTSA + +AIGD LA+ + + R +     ++
Sbjct: 152 GWDGRGVGVLLPTPIHESEEESFSVG-APTTSATVAMAIGDMLALTVTK-RIYGAEKAWI 209

Query: 207 L---HPGGKLG 214
               HPGG +G
Sbjct: 210 FNRNHPGGAIG 220


>gi|327348597|gb|EGE77454.1| sugar isomerase [Ajellomyces dermatitidis ATCC 18188]
          Length = 439

 Score = 88.2 bits (217), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 32/208 (15%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R+ +A   G+ + +   Q             +++  G++VI+G+GKSG I  K+ +T+ S
Sbjct: 44  RAALAHLEGIYATDKFAQDSFERAVTTVANTVRS-GGKLVISGVGKSGKIAEKVVATMNS 102

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G    F+H  EA HGDLGMI  DD ++++++SG + EL  +  +    ++PLIAIT+  
Sbjct: 103 LGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRTPELIRLQPHLPE-TVPLIAITAHE 161

Query: 149 KSVVACHAD-------------IVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALAIAL 193
                 H D             I+L+ P  E E    GL AP TS  + L +GDALA+A 
Sbjct: 162 ------HPDSCPLLAGSNSPDPILLSAPVHEHEDVSFGLPAPMTSTTVALTLGDALALA- 214

Query: 194 LESRNFSEND-------FYVLHPGGKLG 214
             SR    +        F   HPGG +G
Sbjct: 215 -TSRKLYNSPGRGPAEVFKAFHPGGAIG 241


>gi|239611393|gb|EEQ88380.1| sugar isomerase [Ajellomyces dermatitidis ER-3]
          Length = 458

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 31/172 (18%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI+G+GKSG I  K+ +T+ S G    F+H  EA HGDLGMI  DD ++++++SG +
Sbjct: 98  GKLVISGVGKSGKIAEKVVATMNSLGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRT 157

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHAD-------------IVLTLP-KEPESCP 170
            EL  +  +    ++PLIAIT+        H D             I+L+ P  E E   
Sbjct: 158 PELIRLQPHLPE-TVPLIAITAHE------HPDSCPLLAGSNSPDPILLSAPVHEHEDVS 210

Query: 171 HGL-APTTSAIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLG 214
            GL AP TS  + L +GDALA+A   SR    +        F   HPGG +G
Sbjct: 211 FGLPAPMTSTTVALTLGDALALA--TSRKLYNSPGRGPAEVFKAFHPGGAIG 260


>gi|261205310|ref|XP_002627392.1| sugar isomerase [Ajellomyces dermatitidis SLH14081]
 gi|239592451|gb|EEQ75032.1| sugar isomerase [Ajellomyces dermatitidis SLH14081]
          Length = 458

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 32/208 (15%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R+ +A   G+ + +   Q             +++  G++VI+G+GKSG I  K+ +T+ S
Sbjct: 63  RAALAHLEGIYATDKFAQDSFERAVTTVANTVRS-GGKLVISGVGKSGKIAEKVVATMNS 121

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G    F+H  EA HGDLGMI  DD ++++++SG + EL  +  +    ++PLIAIT+  
Sbjct: 122 LGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRTPELIRLQPHLPE-TVPLIAITAHE 180

Query: 149 KSVVACHAD-------------IVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALAIAL 193
                 H D             I+L+ P  E E    GL AP TS  + L +GDALA+A 
Sbjct: 181 ------HPDSCPLLAGSNSPDPILLSAPVHEHEDVSFGLPAPMTSTTVALTLGDALALA- 233

Query: 194 LESRNFSEND-------FYVLHPGGKLG 214
             SR    +        F   HPGG +G
Sbjct: 234 -TSRKLYNSPGRGPAEVFKAFHPGGAIG 260


>gi|309777380|ref|ZP_07672341.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914921|gb|EFP60700.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 208

 Score = 87.8 bits (216), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 3/166 (1%)

Query: 52  QFHCAVEKIKAI--KG-RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           Q   A + I+A   KG R+ +TGIGK  H+    AS L+STG+P++F+   EA HG  G 
Sbjct: 29  QLEKAADMIQAAEQKGCRIHVTGIGKPSHLAGYAASLLSSTGSPAYFLDGTEAVHGSAGQ 88

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  +D++I +S SG++ ELK  +   ++    +IA++    S +  H+D  L    E E 
Sbjct: 89  VAANDVVIAISNSGNTQELKQTIQTLKQNGAHIIAVSGNADSWLYTHSDAQLYAHVEQEG 148

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
                 P  S +++L +  +L++ L   +N +  D+   HPGG LG
Sbjct: 149 DALNKPPRASILVELLVLQSLSVLLQYRKNITGKDYLKWHPGGSLG 194


>gi|260889983|ref|ZP_05901246.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
 gi|260860589|gb|EEX75089.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
          Length = 145

 Score = 87.0 bits (214), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/89 (52%), Positives = 64/89 (71%), Gaps = 2/89 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           L+ +L   F   V  I  +K   +VV+TGIGKSG IG K+ +TLASTGT + F++AAEA 
Sbjct: 31  LKSKLGDDFQKLVRMILELKNNNKVVVTGIGKSGIIGKKITATLASTGTTAVFINAAEAL 90

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           HGDLGMI+  D++I +S SG+SDE+ +IL
Sbjct: 91  HGDLGMISDGDVVIAISNSGNSDEVLSIL 119


>gi|207108430|ref|ZP_03242592.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 181

 Score = 86.7 bits (213), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 102/179 (56%), Gaps = 4/179 (2%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDV 223
           + E+CP   APTTS  + LA+GD L   L+ ++NFS+ DF   HPGG LG  LFV   D+
Sbjct: 2   KKEACPINSAPTTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDL 61

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           + + + +PL+       DA+  +SEKR G   +V+E  +L G++++GD+ R   K ++  
Sbjct: 62  LQTTN-LPLILPSTSFKDALIEMSEKRLGSAILVNETNELVGVLSDGDVRRALLKGVSLE 120

Query: 284 S-VEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           S V       PK     D LL  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 121 SEVRHFATLKPKSFKNLDALLLEALEFLERHKIQILVCVDDHNKVLGVLHLHQLLELGL 179


>gi|126435396|ref|YP_001071087.1| sugar isomerase (SIS) [Mycobacterium sp. JLS]
 gi|126235196|gb|ABN98596.1| sugar isomerase (SIS) [Mycobacterium sp. JLS]
          Length = 214

 Score = 86.7 bits (213), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 91/173 (52%), Gaps = 1/173 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G +         ++  + G+VV TG G SG +  +LA  L+  GTP+ ++ A +A 
Sbjct: 26  SALAGTVEGGVVAVARRLLDVTGKVVTTGSGTSGIMAERLAHLLSVCGTPAVYLPAMDAL 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HG +G +T  DL++ +S +G S EL  +        + ++AIT + KS  A  A  V  L
Sbjct: 86  HGGMGAVTAHDLVLAISKTGRSAELTRLTERLVDRGVDVVAITEDAKSPFALAATQVQAL 145

Query: 163 PKEP-ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           P+ P ++ P G+    S ++  A GDALA+  +  R  + +D    HP G +G
Sbjct: 146 PRTPGDADPGGMIALASTLVVGAWGDALAVVSMTLRGRTLHDVVHSHPAGGVG 198


>gi|320590449|gb|EFX02892.1| sugar isomerase [Grosmannia clavigera kw1407]
          Length = 494

 Score = 85.9 bits (211), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 27/188 (14%)

Query: 53  FHCAVEKIKAIK-----GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           FH AV+ I   +     G++++ G+GKSGHIG KLA+T  S   P+ FVH  EA HGDLG
Sbjct: 163 FHRAVDAIVHTQTAYPAGKLIVVGVGKSGHIGRKLAATFNSLAVPASFVHPTEALHGDLG 222

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE---------------NKSVV 152
            +  +D ++ +++SG + EL ++L +    S+PLI +T+                ++S  
Sbjct: 223 HVRSNDCLLFITYSGKTQELVSLLPHVDP-SLPLILLTAHVPTETCDLVQHRQEFHRSAT 281

Query: 153 ACHADIVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALAIA----LLESRNFSENDFYV 206
           A    I+L  P    E+   G+ APTTS    LA+GDALAI     L  +     + F  
Sbjct: 282 AVGPTILLPAPIPVEEAVSFGVSAPTTSTTTALAVGDALAIVAGNELHSAVGGVGSVFKR 341

Query: 207 LHPGGKLG 214
            HPGG +G
Sbjct: 342 NHPGGAIG 349


>gi|160914258|ref|ZP_02076479.1| hypothetical protein EUBDOL_00268 [Eubacterium dolichum DSM 3991]
 gi|158433885|gb|EDP12174.1| hypothetical protein EUBDOL_00268 [Eubacterium dolichum DSM 3991]
          Length = 200

 Score = 85.9 bits (211), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 57/167 (34%), Positives = 85/167 (50%), Gaps = 7/167 (4%)

Query: 55  CAVEKIKAI------KG-RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            AVEK   I      KG RV +TGIGK GH+   +AS L+STGTPS+ +H  EA HG  G
Sbjct: 26  TAVEKAANIILDAEAKGKRVHVTGIGKPGHVAGYIASLLSSTGTPSYELHGTEAVHGSSG 85

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +   D++I +S SG + ELKA +    +    +I+ T    S +A  +++ L      E
Sbjct: 86  QVLTGDVVIAISNSGETSELKATVDTLLKNGARIISCTGNEHSSLAQSSEVCLKAQVGRE 145

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
                  P  S + ++ +   L+  L E ++ +   +   HPGG LG
Sbjct: 146 GDSLNKPPRASILAEIIVLQLLSDLLQEHKHLNLEQYVKWHPGGSLG 192


>gi|108799755|ref|YP_639952.1| sugar isomerase (SIS) [Mycobacterium sp. MCS]
 gi|119868865|ref|YP_938817.1| sugar isomerase (SIS) [Mycobacterium sp. KMS]
 gi|108770174|gb|ABG08896.1| sugar isomerase (SIS) [Mycobacterium sp. MCS]
 gi|119694954|gb|ABL92027.1| sugar isomerase (SIS) [Mycobacterium sp. KMS]
          Length = 214

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/173 (31%), Positives = 91/173 (52%), Gaps = 1/173 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S+L G +         ++  + G+VV TG G SG +  +LA  L+  GTP+ ++ A +A 
Sbjct: 26  SALAGTVEGGVVAVARRLLDVTGKVVTTGSGTSGIMAERLAHLLSVCGTPAVYLPAMDAL 85

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HG +G +T  DL++ +S +G S EL  +        + ++AIT + +S  A  A  V  L
Sbjct: 86  HGGMGAVTAHDLVLAISKTGRSAELTRLTERLVDRGVDVVAITEDAQSPFALAATQVQAL 145

Query: 163 PKEP-ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           P+ P ++ P G+    S ++  A GDALA+  +  R  + +D    HP G +G
Sbjct: 146 PRTPGDADPGGMIALASTLVVGAWGDALAVVSMALRGHTLHDVVHSHPAGGVG 198


>gi|257871180|ref|ZP_05650833.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257805344|gb|EEV34166.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 198

 Score = 85.5 bits (210), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 83/160 (51%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + +A  GRV +TGIGK  ++   +AS L+STGTPS+F+   EA HG  G +   D++I +
Sbjct: 34  QTEADGGRVHVTGIGKPSYVAGYIASLLSSTGTPSYFLDGTEAVHGSSGQVKAGDVVIAI 93

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + EL   +   +     +I ++  + S ++  +D+ L      E       P  S
Sbjct: 94  SNSGETKELLYTVETLKNNGAKIIGVSKRSDSTLSHLSDVSLCAAVHKEGDLLNKPPRLS 153

Query: 179 AIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
            ++Q+ +   L++ L E+R  +   +   HPGG +G   +
Sbjct: 154 VLVQIIVLQKLSLLLQEARKLTPEMYVQWHPGGAIGESLI 193


>gi|325571541|ref|ZP_08147041.1| KpsF/GutQ family carbohydrate isomerase [Enterococcus casseliflavus
           ATCC 12755]
 gi|325156017|gb|EGC68213.1| KpsF/GutQ family carbohydrate isomerase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 221

 Score = 85.1 bits (209), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 15/201 (7%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEK------IKAIK---------GRVVITGIG 73
           +S++ EK  L    ++L+ +   QF+   E+      +KA +          RV +TG+G
Sbjct: 12  KSVLNEKNVLFEYSTNLKAQSDAQFYRLEEEEVYQQMVKAKELILHAEKNHKRVHVTGVG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K  ++    AS  +S GTP++F+   E  HG  G +   D++I +S SG++ EL+  L  
Sbjct: 72  KCSYVAGYAASLFSSVGTPTYFLDTTETVHGSAGQVVAGDVVIAISNSGNTKELEYALAA 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     ++A+T    S +A  A++ L+     E       P +S I Q+     L++ L
Sbjct: 132 LKANGAVILAVTGNEDSSLASCAEVTLSSYVSQEGDSLNKPPRSSVIAQMIQLQVLSVLL 191

Query: 194 LESRNFSENDFYVLHPGGKLG 214
            E++  +  D+   HPGG LG
Sbjct: 192 QEAKEINLEDYLKWHPGGSLG 212


>gi|313900676|ref|ZP_07834169.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312954738|gb|EFR36413.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 203

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 81/149 (54%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ +TGIGK  H+    AS L+STGTP++F+   EA HG  G +   D++IV+S SG++ 
Sbjct: 46  RIHVTGIGKPAHLAGYSASLLSSTGTPAYFLDGTEAVHGSAGQVAEQDVVIVISNSGNTA 105

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ELK  +   ++    +IA+     S +  ++D  L    E E       P  S +++L +
Sbjct: 106 ELKQTVTTLKQNRAVIIAVCGNTDSWLYANSDAQLYAHVEQEGDRLNKPPRASILVELLV 165

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLG 214
             +L++ L   +N +  D+   HPGG LG
Sbjct: 166 LQSLSVLLQYRKNITGKDYLKWHPGGSLG 194


>gi|281500869|pdb|3K2V|A Chain A, Structure Of The Cbs Pair Of A Putative D-Arabinose
           5-Phosph Isomerase From Klebsiella Pneumoniae Subsp.
           Pneumoniae.
 gi|281500870|pdb|3K2V|B Chain B, Structure Of The Cbs Pair Of A Putative D-Arabinose
           5-Phosph Isomerase From Klebsiella Pneumoniae Subsp.
           Pneumoniae
          Length = 149

 Score = 85.1 bits (209), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 4/146 (2%)

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           E+R F+  DF + HPGG LG  L +  +D+ H+GD IP V +   L DA+  ++ K  G 
Sbjct: 4   EARGFTAEDFALSHPGGALGRKLLLRVNDIXHTGDEIPHVGLQATLRDALLEITRKNLGX 63

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            A+ D+   + GI T+GD+ R F    D    S+ DV  +    I   TL   A+ L + 
Sbjct: 64  TAICDDDXNIIGIFTDGDLRRVFDTGVDXRDASIADVXTRGGIRIRPGTLAVDALNLXQS 123

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
            +I+ ++V  D    +G+VH  DLLR
Sbjct: 124 RHITCVLVA-DGDHLLGVVHXHDLLR 148


>gi|157364048|ref|YP_001470815.1| sugar isomerase (SIS) [Thermotoga lettingae TMO]
 gi|157314652|gb|ABV33751.1| sugar isomerase (SIS) [Thermotoga lettingae TMO]
          Length = 210

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/187 (34%), Positives = 93/187 (49%), Gaps = 13/187 (6%)

Query: 36  RGLSSLESSLQGELSFQF--HCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGT 91
           R L +LE  ++  L FQ       E IK IK  G+++ T  GK+  I  K   TL S G 
Sbjct: 7   RQLKALEKIVE-TLDFQKLEELINEMIKTIKNGGKIIATAFGKNVPICEKFVGTLISVGI 65

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY----ARRFSIPLIAITSE 147
            S+F+H   A HGDLG+I   D++I+L+ SG ++E  +I  Y     R  +  ++    E
Sbjct: 66  DSYFLHTNSAIHGDLGVIKEKDIVILLTKSGETEE--SIYLYKQLQKRNANTYIMTYNKE 123

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
                 C   I+LTL  E E     L P  S I  L +  A+A+ L+E  +   + F + 
Sbjct: 124 GTLAKLCPKSIILTL--EHEGDKWNLIPNNSTIGFLFVLQAVAMELIERLDIELDIFKMN 181

Query: 208 HPGGKLG 214
           HPGG +G
Sbjct: 182 HPGGAIG 188


>gi|302653956|ref|XP_003018793.1| hypothetical protein TRV_07195 [Trichophyton verrucosum HKI 0517]
 gi|291182468|gb|EFE38148.1| hypothetical protein TRV_07195 [Trichophyton verrucosum HKI 0517]
          Length = 477

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 27/190 (14%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNEMARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL------- 131
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L       
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHFPPTT 178

Query: 132 ------YYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQL 183
                  Y +  S PL+A +S   +       I+L  P  EPE    G+ APT+S  + L
Sbjct: 179 SVIVITAYKQPSSCPLLAGSSNANT-------ILLPSPIHEPEEVSFGVCAPTSSTTVAL 231

Query: 184 AIGDALAIAL 193
           A+GDALA+A+
Sbjct: 232 AVGDALALAV 241


>gi|302499485|ref|XP_003011738.1| hypothetical protein ARB_01966 [Arthroderma benhamiae CBS 112371]
 gi|291175291|gb|EFE31098.1| hypothetical protein ARB_01966 [Arthroderma benhamiae CBS 112371]
          Length = 477

 Score = 84.7 bits (208), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 27/190 (14%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNEMARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL------- 131
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L       
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHFPPTT 178

Query: 132 ------YYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQL 183
                  Y +  S PL+A +S   +       I+L  P  EPE    G+ APT+S  + L
Sbjct: 179 SVIVITAYKQPSSCPLLAGSSNANT-------ILLPSPIHEPEEVSFGVCAPTSSTTVAL 231

Query: 184 AIGDALAIAL 193
           A+GDALA+A+
Sbjct: 232 AVGDALALAV 241


>gi|50550191|ref|XP_502568.1| YALI0D08316p [Yarrowia lipolytica]
 gi|49648436|emb|CAG80756.1| YALI0D08316p [Yarrowia lipolytica]
          Length = 322

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 110/212 (51%), Gaps = 25/212 (11%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI-KAIKG--RVVITGIGKSGHI 78
           ++ Q  LR+  A    ++ L  +   E+  QF   ++ +  A+ G  +VV+TG+GKS  I
Sbjct: 22  ASAQTVLRAQAATIAHITDLYDT-DPEVQQQFAKGIQYLHNAVVGGNKVVLTGMGKSHKI 80

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             KL++T+ S G  +  +H  EA HGDLG++   D++++++ SG++ ELK +L +     
Sbjct: 81  ACKLSATMNSLGMHATPLHPTEALHGDLGIVKPGDVVVMITASGNTPELKQLLPH---LD 137

Query: 139 IPLIAITSENKSVVA--CHADIVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALAIALL 194
             L+ +T E  S +    HA     +P    E   +G+ APTTS    L +GD++ IAL 
Sbjct: 138 ATLLTLTCEPNSSLGHLSHAVFACPVPDSHKEKNIYGMAAPTTSTTACLVVGDSICIALC 197

Query: 195 ES---------RNFSENDFYVLHPGGKLGTLF 217
           ES         R F  N     HPGG +G  F
Sbjct: 198 ESLQLDKAERNRTFGRN-----HPGGVIGEAF 224


>gi|67522575|ref|XP_659348.1| hypothetical protein AN1744.2 [Aspergillus nidulans FGSC A4]
 gi|40744874|gb|EAA64030.1| hypothetical protein AN1744.2 [Aspergillus nidulans FGSC A4]
 gi|259487089|tpe|CBF85482.1| TPA: sugar isomerase, KpsF/GutQ (AFU_orthologue; AFUA_6G08860)
           [Aspergillus nidulans FGSC A4]
          Length = 482

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 110/212 (51%), Gaps = 20/212 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHC--AVEKIKAI---KGRVVITGIGKSG 76
           ++V  A+  I  E+  L+ LE   Q +   Q H   AV++I       G++V  G+GKSG
Sbjct: 53  ASVTTAVHVISTERAALAHLERLYQTDQLAQEHLSRAVDQIAGTIRNGGKLVCCGVGKSG 112

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  KL +T+ S G  S F+H  EA HGDLGMI  +D ++++S+SG + EL  +L +   
Sbjct: 113 KIAQKLEATMNSLGIYSTFLHPTEALHGDLGMIRPNDTLLLISFSGRTPELLLLLPHIPP 172

Query: 137 FSIPLIAITSENK-------SVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQLAIGD 187
            ++ ++A+TS          S       I+L  P  E E    G+ APT+S  + L++GD
Sbjct: 173 -TVTIVALTSHLHPSTCPLMSFQPMEKGILLPAPIHEDEETSIGVCAPTSSTTVALSLGD 231

Query: 188 ALAIALLESRNFSEND-----FYVLHPGGKLG 214
           ALAIA     + +        F   HPGG +G
Sbjct: 232 ALAIATARKLHTTPGRGPAEVFKSFHPGGAIG 263


>gi|37719614|gb|AAR01918.1| unknown [Campylobacter jejuni]
          Length = 162

 Score = 84.3 bits (207), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 86/159 (54%), Gaps = 7/159 (4%)

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIG 236
           S    L +GDALA AL++ RNF  +DF + HPGG LG  L     D+M S  ++P+V   
Sbjct: 1   STTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSS-NLPIVHPD 59

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNP 293
               D + +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NP
Sbjct: 60  TEFNDLVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKTSDKPRFDFKAKEIMSTNP 118

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           KV+  D + + A +++ +H I  + VV    K +GI+  
Sbjct: 119 KVVDADAMASEAEEIMLKHKIKEI-VVSKEDKVVGIIQL 156


>gi|255729294|ref|XP_002549572.1| hypothetical protein CTRG_03869 [Candida tropicalis MYA-3404]
 gi|240132641|gb|EER32198.1| hypothetical protein CTRG_03869 [Candida tropicalis MYA-3404]
          Length = 335

 Score = 84.0 bits (206), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 109/213 (51%), Gaps = 29/213 (13%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI-------KGRVVITGIGKS 75
           +VQ  LR    E   +S+L S  Q +  +  +  ++ I  +        G++VITG+GKS
Sbjct: 17  SVQNTLR---FENDAVSNLSSQYQND-EYSMNNLIQSISILYNSVVSNNGKIVITGVGKS 72

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYA 134
             +G KL +TL S    +  +H  +A HGDLG+I +D D +I+++ SG++ EL  +L + 
Sbjct: 73  YKLGLKLVATLNSLSIHASGLHPTDALHGDLGLINQDKDCLIMVTSSGNTPELMELLPHF 132

Query: 135 RRFSIPLIAITSENKSVVACHADI-----VLTLPKEPESCPHGL-APTTSAIMQLAIGDA 188
              ++P+I +T   KS ++ H  I        LP   E   HG+ APT S  + L + DA
Sbjct: 133 ST-TLPIILLTCSRKSKLSEHNQISSLILAELLPCHKEELIHGIPAPTVSFTLSLVLADA 191

Query: 189 LAIALLESRNFSEND-------FYVLHPGGKLG 214
           + +AL E     E D       F   HPGG +G
Sbjct: 192 VILALSE---LIEADVTKRKKLFGCKHPGGSIG 221


>gi|37719590|gb|AAR01895.1| unknown [Campylobacter jejuni]
          Length = 159

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/154 (35%), Positives = 85/154 (55%), Gaps = 7/154 (4%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLID 241
           L +GDALA AL++ RNF  +DF + HPGG LG  L     D+M S  ++P+V       D
Sbjct: 3   LVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSS-NLPIVHPDTEFND 61

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILE 298
            + +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NPKV+  
Sbjct: 62  LVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDA 120

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           D + + A +++ +H I  + VV    K +GI+  
Sbjct: 121 DAMASEAEEIMLKHKIKEI-VVSKEDKVVGIIQL 153


>gi|327306816|ref|XP_003238099.1| sugar isomerase [Trichophyton rubrum CBS 118892]
 gi|326458355|gb|EGD83808.1| sugar isomerase [Trichophyton rubrum CBS 118892]
          Length = 477

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 98/190 (51%), Gaps = 27/190 (14%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQ-GELSFQ-FHCAVEKIKAI---KGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE      EL+      AVE+I        ++++ G+GKSG I
Sbjct: 59  VDMAIHVIATERAALENLERVYSTNELARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL------- 131
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L       
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPSTT 178

Query: 132 ------YYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQL 183
                  Y +  S PL+A +S   +       I+L  P  EPE    G+ APT+S  + L
Sbjct: 179 SVIVITAYKQPSSCPLLAGSSNANT-------ILLPSPIHEPEEVSFGVCAPTSSTTVAL 231

Query: 184 AIGDALAIAL 193
           A+GDALA+A+
Sbjct: 232 AVGDALALAV 241


>gi|257865190|ref|ZP_05644843.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257871515|ref|ZP_05651168.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257799124|gb|EEV28176.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257805679|gb|EEV34501.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 207

 Score = 83.6 bits (205), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV +TG+GK  ++    AS  +S GTP++F+   E  HG  G +   D++I +S SG++ 
Sbjct: 50  RVHVTGVGKCSYVAGYAASLFSSVGTPAYFLDTTETVHGSAGQVVAGDVVIAISNSGNTK 109

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL+  L   +     ++A+T    S +A  A++ L+     E       P +S I Q+  
Sbjct: 110 ELEYALAALKANGAVILAVTGNEDSSLASCAEVTLSSYVSQEGDSLNKPPRSSVIAQMIQ 169

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLG 214
              L++ L E++  +  D+   HPGG LG
Sbjct: 170 LQVLSVLLQEAKEINLEDYLKWHPGGSLG 198


>gi|315055921|ref|XP_003177335.1| sugar isomerase [Arthroderma gypseum CBS 118893]
 gi|311339181|gb|EFQ98383.1| sugar isomerase [Arthroderma gypseum CBS 118893]
          Length = 479

 Score = 83.6 bits (205), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 102/187 (54%), Gaps = 17/187 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLES-SLQGELSFQ-FHCAVEKIKAI---KGRVVITGIGKSG 76
           S V  A+  I  E+  L +LE      EL+      AVE+I        ++++ G+GKSG
Sbjct: 57  SPVDTAIHVIATERAALENLERVYTTNELARNNMERAVEQIANTINAGSKLIVCGVGKSG 116

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG K+ +T+ S G    F+H  EA HGDLGM+   D I+ +++SG + EL  +L +   
Sbjct: 117 KIGEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTILFITYSGKTSELLLVLPHLPS 176

Query: 137 FSIPLIAITSENKSVV------ACHADIVLTLPK---EPESCPHGL-APTTSAIMQLAIG 186
            +  +I IT+  +  +      + +A+ +L LP    EPE    G+ APT+S  + LA+G
Sbjct: 177 -TTSVIVITAHKQPSLCPLLAGSSNANTIL-LPSPIHEPEEVSFGVCAPTSSTTVALAVG 234

Query: 187 DALAIAL 193
           DALA+A+
Sbjct: 235 DALALAV 241


>gi|227878222|ref|ZP_03996194.1| SIS domain protein [Lactobacillus crispatus JV-V01]
 gi|227862186|gb|EEJ69733.1| SIS domain protein [Lactobacillus crispatus JV-V01]
          Length = 198

 Score = 83.2 bits (204), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 92/158 (58%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKIK  KG +++TG G S     K   TL   G  SF+++ ++A HG LG++   DL+I
Sbjct: 33  VEKIKNCKGNILLTGCGTSAMDAKKATHTLNVIGVRSFYLNPSDAVHGSLGVVDSQDLVI 92

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S  GS+ EL + +   ++ +  +I IT   +SV+A  A++++ +  + E     +  T
Sbjct: 93  FISKGGSTKELTSFIENIKKKNAYIITITESPQSVLAKAANMIVKVKVDQEIDEFNMLAT 152

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           TS++  +++ D +A  L++ +NF++ +F   HP G +G
Sbjct: 153 TSSLAVISLFDVVACILMKKKNFNKKNFLANHPSGDVG 190


>gi|161334744|gb|ABX61079.1| hypothetical protein [Campylobacter jejuni]
          Length = 155

 Score = 82.4 bits (202), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 84/152 (55%), Gaps = 7/152 (4%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA AL++ RNF  +DF + HPGG LG  L     D+M S  ++P+V       D +
Sbjct: 1   MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSS-NLPIVHPDTEFNDLV 59

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDT 300
            +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NPKV+  D 
Sbjct: 60  DVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADA 118

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           + + A +++ +H I  + VV    K IGI+  
Sbjct: 119 MASEAEEIMLKHKIKEI-VVSKENKIIGIIQL 149


>gi|326474915|gb|EGD98924.1| hypothetical protein TESG_06287 [Trichophyton tonsurans CBS 112818]
          Length = 477

 Score = 82.4 bits (202), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/190 (34%), Positives = 97/190 (51%), Gaps = 27/190 (14%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQ-GELSFQ-FHCAVEKIKAI---KGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE      EL+      AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNELARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA--------- 129
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL           
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPPTT 178

Query: 130 ----ILYYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQL 183
               I  Y +  S PL+A +S   +       I+L  P  EPE    G+ APT+S  + L
Sbjct: 179 SVIVITAYKQPSSCPLLAGSSNANT-------ILLPSPIHEPEEVSFGVCAPTSSTTVAL 231

Query: 184 AIGDALAIAL 193
           A+GDALA+A+
Sbjct: 232 AVGDALALAV 241


>gi|262276701|ref|ZP_06054496.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
 gi|262225132|gb|EEY75589.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
          Length = 165

 Score = 82.0 bits (201), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/155 (37%), Positives = 82/155 (52%), Gaps = 5/155 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R II E+  +S+L + LQ  ++  F  A+  I   KG ++  G+GKS  I  K   T  S
Sbjct: 12  RGIIKEE--ISAL-NKLQKSINASFSKAINAINKNKGFIIFCGVGKSKLILDKTCGTFQS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  S+ +  ++ASHG LG I  DDL I+ S SG ++EL  IL  AR     +I ITS  
Sbjct: 69  LGISSYVLDPSQASHGSLGNIRSDDLFIIASNSGETNELLPILKLARENKNVVIGITSGT 128

Query: 149 KSVVACHADIVLTLP--KEPESCPHGLAPTTSAIM 181
           KS +A H++I +  P  KE         PT+S  +
Sbjct: 129 KSKLAKHSNIKIFYPNVKEAGDANFKSVPTSSTTV 163


>gi|320582468|gb|EFW96685.1| Polysialic acid capsule expression protein [Pichia angusta DL-1]
          Length = 372

 Score = 81.3 bits (199), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 88/166 (53%), Gaps = 13/166 (7%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD--DLIIVLSWSG 122
           G+V+++GIGKS  I SK  +TL S    S  +H +EA HGDLG+I  D  D ++++S SG
Sbjct: 70  GKVIVSGIGKSYKIASKTVATLNSLSVHSALLHPSEALHGDLGIIREDHHDSLVIISASG 129

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL-----PKEPESCPHGL-APT 176
           +S EL  +L Y    S+P++ +T    S ++ H  +         P   E   +GL APT
Sbjct: 130 NSPELTTLLEYV-PASVPVVLVTCTKVSALSKHPKVKALFYAELPPNVSEKNLYGLQAPT 188

Query: 177 TSAIMQLAIGDALAIALLE----SRNFSENDFYVLHPGGKLGTLFV 218
            S  + L + D ++IAL E         +  F   HPGG +G  ++
Sbjct: 189 ISTTICLTLLDGISIALSELHIKDLEVRQKRFGDRHPGGAIGLHYL 234


>gi|169333738|ref|ZP_02860931.1| hypothetical protein ANASTE_00122 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259587|gb|EDS73553.1| hypothetical protein ANASTE_00122 [Anaerofustis stercorihominis DSM
           17244]
          Length = 200

 Score = 80.1 bits (196), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 80/162 (49%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVEKI   KG V+  G G S     + A+       PS  ++   A HG+ GMI   D+ 
Sbjct: 37  AVEKIANCKGNVIFAGCGSSSTAAFRAANIYNFLYIPSVAINVMNALHGEYGMIREGDIF 96

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S SG+++EL   +  A++    +I +T  + S +A ++ I +T     E     +  
Sbjct: 97  IPISKSGNTEELVQSIPIAKKLGAYIIGLTENDNSYIAENSHIAITFNSLKELDDKDMVA 156

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           T+S      I D +  A+++  N ++ DF ++HP G +G + 
Sbjct: 157 TSSTTCSSIILDIIGGAVMKKNNITDKDFKLIHPNGAVGQML 198


>gi|296823432|ref|XP_002850444.1| sugar isomerase [Arthroderma otae CBS 113480]
 gi|238837998|gb|EEQ27660.1| sugar isomerase [Arthroderma otae CBS 113480]
          Length = 436

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 97/184 (52%), Gaps = 15/184 (8%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHI 78
           +  A+  I  E+  L +LE   +           AVE+I        ++++ G+GKSG I
Sbjct: 21  IDTAIHVIATERAALENLERVYTTNDLARNNLERAVEQIANTINAGSKLIVCGVGKSGKI 80

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L +    +
Sbjct: 81  GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPSTT 140

Query: 139 IPLIAITSENKS-----VVACHADIVLTLPK---EPESCPHGL-APTTSAIMQLAIGDAL 189
             +I IT+  +      +   +++  + LP    EPE    G+ APT+S  + LA+GDAL
Sbjct: 141 S-VIVITAHKQPSSCPLLAGSNSENTILLPSPIHEPEEVSFGVCAPTSSTTVALAVGDAL 199

Query: 190 AIAL 193
           A+A+
Sbjct: 200 ALAV 203


>gi|222143233|pdb|3FNA|A Chain A, Crystal Structure Of The Cbs Pair Of Possible D-Arabinose
           5- Phosphate Isomerase Yrbh From Escherichia Coli Cft073
 gi|222143234|pdb|3FNA|B Chain B, Crystal Structure Of The Cbs Pair Of Possible D-Arabinose
           5- Phosphate Isomerase Yrbh From Escherichia Coli Cft073
          Length = 149

 Score = 79.7 bits (195), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 4/146 (2%)

Query: 195 ESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++R F+  DF + HPGG LG  L +  +D+ H+GD IP VK    L DA+  ++ K  G 
Sbjct: 4   KARGFTAEDFALSHPGGALGRKLLLRVNDIXHTGDEIPHVKKTASLRDALLEVTRKNLGX 63

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
             + D+   ++GI T+GD+ R F    D+  LS+ DV       +    L   A+ L + 
Sbjct: 64  TVICDDNXXIEGIFTDGDLRRVFDXGVDVRRLSIADVXTPGGIRVRPGILAVEALNLXQS 123

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
            +I+ + V  D    +G++H  DLLR
Sbjct: 124 RHITSVXVA-DGDHLLGVLHXHDLLR 148


>gi|226290825|gb|EEH46279.1| sugar isomerase [Paracoccidioides brasiliensis Pb18]
          Length = 443

 Score = 79.0 bits (193), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/208 (34%), Positives = 108/208 (51%), Gaps = 29/208 (13%)

Query: 21  NSTVQCALRSIIAEKRGLSSLES-SLQGELSF-QFHCAVEKIKAI---KGRVVITGIGKS 75
           +S++  AL  I  E+  L+ LE   L  +L+      AV  I       G++VITG+GKS
Sbjct: 53  SSSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVISGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H +EA HGDLG+I  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPSEALHGDLGVIKPNDTVLLVTFSGKTPELLRLQPYLP 172

Query: 136 RFSIPLIAITSENK----SVVACHAD---IVLTLP-KEPESCPHGL-APTTSAIMQLAIG 186
             ++ +IAIT+  +     ++AC ++   I+L  P  E E    GL AP TS  + LA  
Sbjct: 173 T-TVSIIAITAHMQPDLCPLLACSSNANSILLASPVHEHEEISFGLPAPMTSTTVALA-- 229

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLG 214
                        S   F   HPGG +G
Sbjct: 230 ------------RSAEVFKGFHPGGAIG 245


>gi|146412762|ref|XP_001482352.1| hypothetical protein PGUG_05372 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 371

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI GIGKS  IG+K+ +TL S    +  +H +EA HGDLG+I   D +I ++ SG++
Sbjct: 57  GKLVICGIGKSLKIGNKMVATLNSLSIQASSLHPSEALHGDLGIIRDCDCLIFITASGNT 116

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE-----PESCPHGL-APTTS 178
            EL  +L +  + S+P+I +T    S ++    +   L  E      E   HGL APT S
Sbjct: 117 PELINLLPHIPK-SVPIILLTCSKSSKLSLSPQVKSLLYAELPSHLNEEAIHGLPAPTVS 175

Query: 179 AIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLG 214
             + LA+ DA  +AL E     E+D       F + HPGG +G
Sbjct: 176 TTLSLALADATVLALSE---ILEDDLLKRKKLFSIKHPGGAIG 215


>gi|310831254|ref|YP_003969897.1| putative bifunctional KDO 8-phosphate phosphatase/arabinose
           5-phosphate isomerase [Cafeteria roenbergensis virus
           BV-PW1]
 gi|309386438|gb|ADO67298.1| putative bifunctional KDO 8-phosphate phosphatase/arabinose
           5-phosphate isomerase [Cafeteria roenbergensis virus
           BV-PW1]
          Length = 457

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 104/217 (47%), Gaps = 6/217 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           IK     +   GIGKSG+I    +  L S     +++++    HGD+G + + +LI++ S
Sbjct: 191 IKNTDNNIYFMGIGKSGNIAKHCSDLLKSISINCYYLNSINLLHGDIGTLNQ-NLIVMFS 249

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP--KEPESCPHGLAPTT 177
            SG++ E+  ++ + ++    ++ I  ++ S+     D+V+  P  KE +   + + PT 
Sbjct: 250 KSGNTHEIIELIPFLKQRKCYVVGICCDDNSLFEKDCDLVIKTPFTKEIDGAINKI-PTN 308

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
           S +  L   + L   L E+ N  E  + + HP G +G   +   D +       ++    
Sbjct: 309 SIMSHLLFTNILVSKLKENINIEE--YSLNHPSGNIGKNLLKIKDCLILDFPKIILDKNV 366

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L      +++ + GC   V+   KL GI+T+GDI R
Sbjct: 367 LLHKVFLNMTKYKIGCCFFVNYDNKLLGILTDGDIRR 403


>gi|190348754|gb|EDK41274.2| hypothetical protein PGUG_05372 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 371

 Score = 78.6 bits (192), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 89/163 (54%), Gaps = 17/163 (10%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++VI GIGKS  IG+K+ +TL S    +  +H +EA HGDLG+I   D +I ++ SG++
Sbjct: 57  GKLVICGIGKSLKIGNKMVATLNSLSIQASSLHPSEALHGDLGIIRDCDCLIFITASGNT 116

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE-----PESCPHGL-APTTS 178
            EL  +L +  + S+P+I +T    S ++    +   L  E      E   HGL APT S
Sbjct: 117 PELINLLPHIPK-SVPIILLTCSKSSKLSSSPQVKSLLYAELPSHLNEEAIHGLPAPTVS 175

Query: 179 AIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLG 214
             + LA+ DA  +AL E     E+D       F + HPGG +G
Sbjct: 176 TTLSLALADATVLALSE---ILEDDLLKRKKLFSIKHPGGAIG 215


>gi|149237526|ref|XP_001524640.1| hypothetical protein LELG_04612 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452175|gb|EDK46431.1| hypothetical protein LELG_04612 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 513

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 87/164 (53%), Gaps = 18/164 (10%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSG 122
           KG+++I GIGKS  + +KL +TL S    S  +H +EA HGDLGMI    D +I+L+ SG
Sbjct: 117 KGKIIICGIGKSHKLATKLTATLNSLSISSCNLHPSEALHGDLGMINESLDCLIMLTSSG 176

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADI-----VLTLPKEPESCPHGL-APT 176
           ++ EL  +L +     +P+I +T    S ++    I        LP   E   HGL APT
Sbjct: 177 NTPELLNLLPHLST-DLPIILLTCNKVSKLSKSGRIRSLIYAELLPMHNEEAIHGLPAPT 235

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFY-------VLHPGGKL 213
            S  + L + D++ +AL E     END +       + HPGG +
Sbjct: 236 VSTTLSLILADSVILALSE---LIENDLFKRRKLFGLKHPGGSI 276


>gi|68489422|ref|XP_711462.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|68489455|ref|XP_711445.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|46432748|gb|EAK92217.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|46432766|gb|EAK92234.1| potential phosphosugar binding protein [Candida albicans SC5314]
          Length = 395

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 14/167 (8%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI--TRDDLIIV 117
           I A  G++VITG+GKS  +G KL +TL S    S  +H  EA HGDLG+I   RD LI+V
Sbjct: 56  IVANNGKIVITGVGKSYKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMV 115

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP-----HG 172
            S SG++ EL  +L +    ++P++ +T    S ++ +  I   +  E  SC      HG
Sbjct: 116 TS-SGNTPELIQLLPHLSS-NLPILLLTCSKNSKLSQYNQINSLILAELLSCHKEEIIHG 173

Query: 173 L-APTTSAIMQLAIGDALAIA---LLESRNFSENDFYVL-HPGGKLG 214
           + APT S  + + + DA+ +A   L+E+ +      + L HPGG +G
Sbjct: 174 IPAPTVSFTLSMMLADAVILALSELIETDSLKRKKLFGLKHPGGSIG 220


>gi|238881335|gb|EEQ44973.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 392

 Score = 78.2 bits (191), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 14/167 (8%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI--TRDDLIIV 117
           I A  G++VITG+GKS  +G KL +TL S    S  +H  EA HGDLG+I   RD LI+V
Sbjct: 56  IVANNGKIVITGVGKSYKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMV 115

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP-----HG 172
            S SG++ EL  +L +    ++P++ +T    S ++ +  I   +  E  SC      HG
Sbjct: 116 TS-SGNTPELIQLLPHLSS-NLPILLLTCSKNSKLSQYNQINSLILAELLSCHKEEIIHG 173

Query: 173 L-APTTSAIMQLAIGDALAIA---LLESRNFSENDFYVL-HPGGKLG 214
           + APT S  + + + DA+ +A   L+E+ +      + L HPGG +G
Sbjct: 174 IPAPTVSFTLSMMLADAVILALSELIETDSLKRKKLFGLKHPGGSIG 220


>gi|241954864|ref|XP_002420153.1| phosphosugar binding protein, putative [Candida dubliniensis CD36]
 gi|223643494|emb|CAX42373.1| phosphosugar binding protein, putative [Candida dubliniensis CD36]
          Length = 383

 Score = 77.8 bits (190), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 91/163 (55%), Gaps = 14/163 (8%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI--TRDDLIIVLSWS 121
            G++VITG+GKS  +G KL +TL S    S  +H  EA HGDLG+I   RD LI+V S S
Sbjct: 60  NGKIVITGVGKSYKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMVTS-S 118

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP-----HGL-AP 175
           G++ EL  +L +    ++P++ +T    S ++ +  I   +  E  SC      HG+ AP
Sbjct: 119 GNTPELIQLLPHLSS-NLPILLLTCSRNSKLSQYNQINSLILAELLSCHKEEIIHGIPAP 177

Query: 176 TTSAIMQLAIGDALAIA---LLESRNFSENDFYVL-HPGGKLG 214
           T S  + + + DA+ +A   L+E+ +      + L HPGG +G
Sbjct: 178 TVSFTLSMMLADAVILALSELIETDSLKRKKLFGLKHPGGSIG 220


>gi|328956133|ref|YP_004373466.1| sugar isomerase (SIS) [Coriobacterium glomerans PW2]
 gi|328456457|gb|AEB07651.1| sugar isomerase (SIS) [Coriobacterium glomerans PW2]
          Length = 212

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 75/159 (47%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV +TGIGK  H+   +AS  +STGTP++ +H  EA HG  G +   D++I +S SG + 
Sbjct: 53  RVHVTGIGKPAHVAGYVASLFSSTGTPAYELHGTEAVHGSSGQVRPGDIVIAISNSGETA 112

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ELKA +         +I++T    S +A   ++ L      E       P  S + ++  
Sbjct: 113 ELKATVSTLIANGAHIISVTGNPSSWLARVGEVELIASVSQEGDYMNKPPRVSVLAEIIE 172

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
              L+I L  +   +   +   HPGG LG       D +
Sbjct: 173 LQCLSILLQRAYGLTPQSYVTWHPGGSLGQSIRSTEDSL 211


>gi|254574460|ref|XP_002494339.1| hypothetical protein [Pichia pastoris GS115]
 gi|238034138|emb|CAY72160.1| Hypothetical protein PAS_chr4_0890 [Pichia pastoris GS115]
 gi|328353844|emb|CCA40241.1| Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
           [Pichia pastoris CBS 7435]
          Length = 331

 Score = 77.4 bits (189), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 93/166 (56%), Gaps = 13/166 (7%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI--TRDDLIIVLSWS 121
           +G++VI+G+GKS  I +K+++T+ S    S  +H  EA HGDLG++    +D +I++S S
Sbjct: 55  RGKLVISGVGKSHKIATKISATMNSLSLHSAVLHPTEALHGDLGLLREENNDTLILISVS 114

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVA----CHADIVLTLPKE-PESCPHGL-AP 175
           G + EL ++L Y     I +I +T    S++A        +   LP +  ES  +GL AP
Sbjct: 115 GKTSELISLLSYVPN-DIAVILLTCTRDSILARDHRVKGVLYAELPYQFSESYLYGLSAP 173

Query: 176 TTSAIMQLAIGDALAIALLES----RNFSENDFYVLHPGGKLGTLF 217
           T S  + L + D+++IAL E+    +   +  F   HPGG +G  +
Sbjct: 174 TISTTLCLTLMDSVSIALAEAYIKDKQLRQRLFGERHPGGVIGEEY 219


>gi|254580447|ref|XP_002496209.1| ZYRO0C13002p [Zygosaccharomyces rouxii]
 gi|238939100|emb|CAR27276.1| ZYRO0C13002p [Zygosaccharomyces rouxii]
          Length = 327

 Score = 77.0 bits (188), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 83/167 (49%), Gaps = 19/167 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            +VV+ G GKS  I SK  +TL S G PS  +H  EA HGD+G+I + D ++V S  G +
Sbjct: 76  NKVVLLGCGKSHIIASKAVATLRSVGIPSAILHPTEAMHGDMGLIQQGDALLVCSSGGET 135

Query: 125 DELKAILYYARRFSIPL-------IAITSENKSVVACHADIVLTLPKE-PES-CPHGL-A 174
           DE+   L YA     PL       I   ++ +S ++   D ++ LP+  PE+    GL A
Sbjct: 136 DEIVQFLKYASSPLAPLPLQNIVKIGACAKPESTISLMCDSLILLPQRYPETEVQEGLKA 195

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLG 214
           PT S    L   D L I+L  S  + + D       F   HP G +G
Sbjct: 196 PTLSTTSMLVTLDCLCISL--SEMYYDGDLSLRSQIFNASHPSGGIG 240


>gi|148981449|ref|ZP_01816415.1| polysialic acid capsule expression protein [Vibrionales bacterium
           SWAT-3]
 gi|145960871|gb|EDK26202.1| polysialic acid capsule expression protein [Vibrionales bacterium
           SWAT-3]
          Length = 99

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 34/61 (55%), Positives = 48/61 (78%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           + ++V TGIGK+GHI  K ++TL+STG+PS F+H AEA+HGDLG+I+  D++I  S SG 
Sbjct: 38  QSKIVTTGIGKAGHIAHKFSATLSSTGSPSVFLHPAEAAHGDLGIISPSDILIAFSTSGK 97

Query: 124 S 124
           S
Sbjct: 98  S 98


>gi|71016125|ref|XP_758868.1| hypothetical protein UM02721.1 [Ustilago maydis 521]
 gi|46098386|gb|EAK83619.1| hypothetical protein UM02721.1 [Ustilago maydis 521]
          Length = 447

 Score = 76.6 bits (187), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/94 (44%), Positives = 61/94 (64%), Gaps = 1/94 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDLIIVLSWSGS 123
           G+VV+TG+GKSG I  KL++T  S GTPS F+H  EA HGDLG++T   D++I LS SGS
Sbjct: 177 GKVVLTGVGKSGIIAKKLSATFLSLGTPSMFLHPTEALHGDLGLLTPHRDVVIALSHSGS 236

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           S E+  ++ +      P+IA+  +  S +   +D
Sbjct: 237 SPEILTLVPHLNARRCPIIALVGKRDSALVKASD 270



 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           AP++S  + LA+GDALA ++  ++    + F   HPGGKLG      +D    G S PL
Sbjct: 377 APSSSTTVALAMGDALAFSVTRAKGLGRDMFAFNHPGGKLG------ADFRLQGQSAPL 429


>gi|121699633|ref|XP_001268086.1| sugar isomerase, KpsF/GutQ [Aspergillus clavatus NRRL 1]
 gi|119396228|gb|EAW06660.1| sugar isomerase, KpsF/GutQ [Aspergillus clavatus NRRL 1]
          Length = 438

 Score = 75.9 bits (185), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 78/130 (60%), Gaps = 6/130 (4%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCA---VEKIKAIK--GRVVITGIGKSG 76
           + V  A+  I  E+  L+ LE   Q +   Q + A    + ++ ++  G++V+ G+GKSG
Sbjct: 33  AAVTTAIHVISTERAALTHLEQIYQTDRLAQENLARAVSQIVRTVRNGGKLVVCGVGKSG 92

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG + EL  +L +   
Sbjct: 93  KIGQKLEATMNSMGIYSTFLHPTEALHGDLGLIRPHDNLLLISFSGRTPELMLLLPHIPS 152

Query: 137 FSIPLIAITS 146
            ++P+IA+TS
Sbjct: 153 -TVPVIALTS 161


>gi|240277978|gb|EER41485.1| sugar isomerase [Ajellomyces capsulatus H143]
 gi|325096039|gb|EGC49349.1| sugar isomerase [Ajellomyces capsulatus H88]
          Length = 455

 Score = 75.1 bits (183), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 19/166 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++I+G+GKSG I  K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG +
Sbjct: 98  GKLIISGVGKSGKIAEKVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKT 157

Query: 125 DELKAILYYARRFSIPLIAITS-ENKSVVACHAD------IVLTLP-KEPESCPHGL-AP 175
            EL  +  Y    ++PLIAIT+ E+  +    AD      I+LT P  E E    GL AP
Sbjct: 158 PELLRLKPYL-PATVPLIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAP 216

Query: 176 TTSAIMQLAIGDALAIALLESRN-FSEND------FYVLHPGGKLG 214
            TS  + LA+    A+AL  SR  ++  D      F   HPGG +G
Sbjct: 217 MTSTTVALAL--GDALALATSRKLYNSPDKGPAEVFKGFHPGGAIG 260


>gi|225557336|gb|EEH05622.1| sugar isomerase [Ajellomyces capsulatus G186AR]
          Length = 455

 Score = 75.1 bits (183), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 94/166 (56%), Gaps = 19/166 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++I+G+GKSG I  K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG +
Sbjct: 98  GKLIISGVGKSGKIAEKVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKT 157

Query: 125 DELKAILYYARRFSIPLIAITS-ENKSVVACHAD------IVLTLP-KEPESCPHGL-AP 175
            EL  +  Y    ++PLIAIT+ E+  +    AD      I+LT P  E E    GL AP
Sbjct: 158 PELLRLKPYL-PATVPLIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAP 216

Query: 176 TTSAIMQLAIGDALAIALLESRN-FSEND------FYVLHPGGKLG 214
            TS  + LA+    A+AL  SR  ++  D      F   HPGG +G
Sbjct: 217 MTSTTVALAL--GDALALATSRKLYNSPDKGPAEVFKGFHPGGAIG 260


>gi|126701254|ref|YP_001090151.1| putative sugar-phosphate isomerase [Clostridium difficile 630]
 gi|115252691|emb|CAJ70535.1| putative phosphosugar isomerase [Clostridium difficile]
          Length = 207

 Score = 74.7 bits (182), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG +
Sbjct: 51  GRVHVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGET 110

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELKA L   +     +I ++    S +   +DI L    + E      AP  S + +  
Sbjct: 111 QELKATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETI 170

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           I  +L++ L  ++  +   +   HP G LG
Sbjct: 171 ILQSLSVVLQYAKGLNTQQYLKWHPAGSLG 200


>gi|255102845|ref|ZP_05331822.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-63q42]
 gi|255308665|ref|ZP_05352836.1| putative sugar-phosphate isomerase [Clostridium difficile ATCC
           43255]
          Length = 199

 Score = 74.3 bits (181), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/150 (32%), Positives = 78/150 (52%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG +
Sbjct: 43  GRVHVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGET 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELKA L   +     +I ++    S +   +DI L    + E      AP  S + +  
Sbjct: 103 QELKATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETI 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           I  +L++ L  ++  +   +   HP G LG
Sbjct: 163 ILQSLSVVLQYAKGLNTQQYLKWHPAGSLG 192


>gi|260685171|ref|YP_003216456.1| putative sugar-phosphate isomerase [Clostridium difficile CD196]
 gi|260688830|ref|YP_003219964.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
 gi|260211334|emb|CBA66946.1| putative sugar-phosphate isomerase [Clostridium difficile CD196]
 gi|260214847|emb|CBE07618.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
          Length = 207

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG +
Sbjct: 51  GRVHVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGET 110

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELKA L   +     +I ++    S +   +DI L    + E      AP  S + +  
Sbjct: 111 QELKATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETI 170

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +  +L++ L  ++  +   +   HP G LG
Sbjct: 171 VLQSLSVVLQYAKGLNTQQYLKWHPAGSLG 200


>gi|254977290|ref|ZP_05273762.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-66c26]
 gi|255094620|ref|ZP_05324098.1| putative sugar-phosphate isomerase [Clostridium difficile CIP
           107932]
 gi|255316374|ref|ZP_05357957.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-76w55]
 gi|255519033|ref|ZP_05386709.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-97b34]
 gi|255652217|ref|ZP_05399119.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-37x79]
 gi|306521937|ref|ZP_07408284.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-32g58]
          Length = 199

 Score = 73.9 bits (180), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 78/150 (52%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG +
Sbjct: 43  GRVHVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGET 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            ELKA L   +     +I ++    S +   +DI L    + E      AP  S + +  
Sbjct: 103 QELKATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETI 162

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +  +L++ L  ++  +   +   HP G LG
Sbjct: 163 VLQSLSVVLQYAKGLNTQQYLKWHPAGSLG 192


>gi|258575161|ref|XP_002541762.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902028|gb|EEP76429.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 464

 Score = 72.8 bits (177), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 111/207 (53%), Gaps = 22/207 (10%)

Query: 31  IIAEKRGLSSLESSLQGE-LSFQ-FHCAVEKIKA---IKGRVVITGIGKSGHIGSKLAST 85
           I  EK  L++LE     + LS +    AVE++     I G++VI G+GKSG IG KL +T
Sbjct: 63  IATEKAALANLERIYTTDTLSRENMERAVERVARTINIGGKLVICGVGKSGKIGEKLVAT 122

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           + S G  S F+H  EA HGDLGMI  +D ++ +++SG + EL  +L +       +IAIT
Sbjct: 123 MNSFGIQSCFLHPTEALHGDLGMIRLNDTLLFITFSGKTSELLVLLPHLPPTLP-VIAIT 181

Query: 146 SE-NKSVVACHAD------IVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALA------ 190
           S    S  A  +D      I+L  P  E E    GL APTTS  + LA+GDALA      
Sbjct: 182 SHMQPSSCALLSDSDIRDTILLPAPVHEREEVSFGLPAPTTSTTVALALGDALALAIARK 241

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLF 217
           +  +  R  +E  F   HPGG +G  F
Sbjct: 242 LHTVPGRGPAEV-FKGFHPGGAIGAAF 267


>gi|255717705|ref|XP_002555133.1| KLTH0G02156p [Lachancea thermotolerans]
 gi|238936517|emb|CAR24696.1| KLTH0G02156p [Lachancea thermotolerans]
          Length = 360

 Score = 72.4 bits (176), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 102/221 (46%), Gaps = 26/221 (11%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAIKG-RVVI 69
           K  SLM    V+     +    R +S +      E   +S   H  V+ +K  KG ++V 
Sbjct: 36  KSQSLMGQDGVRTFQDMLYQHARAMSHVSVYYATEEVGVSELLHTLVQVLK--KGSKLVF 93

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G GKS  I  K  + L S G  S ++H +EA HGD+G +   D ++V S SG + EL  
Sbjct: 94  LGSGKSFKIILKTVAMLTSLGIDSRYLHPSEALHGDMGAVRPGDALVVCSSSGETQELVQ 153

Query: 130 ILYYARRFSIPLIA--ITSENKSVVACHADIVLTLPK----EPESCPHGL-APTTSAIMQ 182
            L +A R   P +   +TS  +S +    D VL +P+    + ++   GL +PT S  + 
Sbjct: 154 FLEHAGRVLEPSVKVLVTSSTQSTLHALVDQVLYVPQPVQFQEKTLQDGLPSPTVSTTLM 213

Query: 183 LAIGDALAIALLE---------SRNFSENDFYVLHPGGKLG 214
           L + D   +AL E          R F    F  +HPGG +G
Sbjct: 214 LTVLDCFCLALTELYFDGDTARRREF----FRKMHPGGGIG 250


>gi|242777046|ref|XP_002478953.1| sugar isomerase, KpsF/GutQ [Talaromyces stipitatus ATCC 10500]
 gi|218722572|gb|EED21990.1| sugar isomerase, KpsF/GutQ [Talaromyces stipitatus ATCC 10500]
          Length = 444

 Score = 71.6 bits (174), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/82 (46%), Positives = 57/82 (69%), Gaps = 1/82 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V+ G+GKSG IG KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG +
Sbjct: 58  GKLVVCGVGKSGKIGRKLEATMNSVGIHSVFLHPTEALHGDLGVIRSIDTLLLISFSGRT 117

Query: 125 DELKAILYYARRFSIPLIAITS 146
            EL  +L +    ++P+IAITS
Sbjct: 118 AELLLMLPHIPP-TVPIIAITS 138


>gi|289808981|ref|ZP_06539610.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 128

 Score = 71.6 bits (174), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 69/128 (53%), Gaps = 3/128 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           L +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+ R 
Sbjct: 2   LLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRM 61

Query: 276 FH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           F    D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++H  
Sbjct: 62  FDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVLHMH 120

Query: 334 DLLRFGII 341
           DLLR G++
Sbjct: 121 DLLRAGVV 128


>gi|154274590|ref|XP_001538146.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414586|gb|EDN09948.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 455

 Score = 70.9 bits (172), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 93/166 (56%), Gaps = 19/166 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++I+G+GKSG I  K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG +
Sbjct: 98  GKLIISGVGKSGKIAEKVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKT 157

Query: 125 DELKAILYYARRFSIPLIAITS-ENKSVVACHAD------IVLTLP-KEPESCPHGL-AP 175
            EL  +  Y    ++ LIAIT+ E+  +    AD      I+LT P  E E    GL AP
Sbjct: 158 PELLRLKPYL-PATVQLIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAP 216

Query: 176 TTSAIMQLAIGDALAIALLESRN-FSEND------FYVLHPGGKLG 214
            TS  + LA+    A+AL  SR  ++  D      F   HPGG +G
Sbjct: 217 MTSTTVALAL--GDALALATSRKLYNSPDKGPAEVFKGFHPGGAIG 260


>gi|167946212|ref|ZP_02533286.1| KpsF/GutQ family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 120

 Score = 70.5 bits (171), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           MH   +IP V     L  A+  +SEK  G  AVVD  Q+L GI T+GD+ R  ++ LN  
Sbjct: 1   MHRDQAIPKVAANASLQQALIEMSEKGLGMTAVVDAEQRLIGIFTDGDLRRTLNRPLNIR 60

Query: 284 S--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              V +VM  +   +  + L   A+Q++ +  I+   VVD   + IG  +  DLLR G++
Sbjct: 61  DTLVSEVMTPHGATVPAEMLAAEALQIMDEKKINGFFVVDAAARLIGAFNMHDLLRAGVV 120


>gi|313898564|ref|ZP_07832100.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312956638|gb|EFR38270.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 154

 Score = 70.1 bits (170), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/105 (37%), Positives = 60/105 (57%), Gaps = 10/105 (9%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GR+ +TGIGK GH+   +AS L+STGT ++ +H  EA HG  G + + D++I +S SG +
Sbjct: 43  GRIHVTGIGKPGHVAGYIASLLSSTGTSAYELHGTEAVHGSSGQVKKGDVVIAISNSGET 102

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            EL+A +         LIA       +++C  +   TL K+ E C
Sbjct: 103 MELEATVQ-------TLIA---NGAHIISCTGNPQSTLAKQSEVC 137


>gi|212532977|ref|XP_002146645.1| sugar isomerase, KpsF/GutQ [Penicillium marneffei ATCC 18224]
 gi|210072009|gb|EEA26098.1| sugar isomerase, KpsF/GutQ [Penicillium marneffei ATCC 18224]
          Length = 448

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V+ G+GKSG I  KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG +
Sbjct: 58  GKLVVCGVGKSGKISRKLEATMNSVGIHSVFLHPTEALHGDLGVIRSIDTLLLISFSGRT 117

Query: 125 DELKAILYYARRFSIPLIAITS 146
            EL  +L +    ++P+IAITS
Sbjct: 118 AELLLMLPHVPP-TVPIIAITS 138


>gi|50308223|ref|XP_454112.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643247|emb|CAG99199.1| KLLA0E03719p [Kluyveromyces lactis]
          Length = 293

 Score = 69.7 bits (169), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/169 (30%), Positives = 79/169 (46%), Gaps = 19/169 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+++  G GKS  I  K  + L S G P+  +H  EA HGD+G    +D +I  S SG +
Sbjct: 45  GKLIFVGCGKSYKIICKTVAMLTSMGIPARDLHPIEAMHGDMGCCQPNDSLIFCSTSGET 104

Query: 125 DELKAILYYARRFSIPL-----IAITSENKSVVACHADIVLTLP-----KEPESCPHGLA 174
           DE+  +L Y +           IA+T    S +A H    + +P     KEP+      A
Sbjct: 105 DEVLNLLRYLKAGGSYWEKCIRIAVTGNRNSTLATHCQHTIVVPQADRFKEPKFQRGLRA 164

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSEND-------FYVLHPGGKLGTL 216
           PT S  + + + D + I +  S+ +  ND       F   HPGG +G +
Sbjct: 165 PTISTSLMVTVLDCICIEI--SKAWFGNDPVKREIFFNERHPGGGIGKI 211


>gi|213023976|ref|ZP_03338423.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 121

 Score = 69.3 bits (168), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
           D+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+ R F    D
Sbjct: 1   DIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRMFDMGGD 60

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++H  DLLR G
Sbjct: 61  MRQLGIAEVMTPGAIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVLHMHDLLRAG 119

Query: 340 II 341
           ++
Sbjct: 120 VV 121


>gi|322698322|gb|EFY90093.1| sugar isomerase, KpsF/GutQ [Metarhizium acridum CQMa 102]
          Length = 437

 Score = 68.6 bits (166), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/145 (33%), Positives = 74/145 (51%), Gaps = 19/145 (13%)

Query: 20  KNSTVQCALRSIIAE---KRGLSSLESSLQGELSFQ------------FHCAVEKIKA-- 62
           +NS  QC L S   E   +RGL  L +      +              F  AV+ I    
Sbjct: 69  QNSHQQCPLESPSKETRLRRGLHVLNTEALALAALAKLYETDSTAREGFDKAVQVITRQA 128

Query: 63  -IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
              G++++ G+GKSGHIG KL +TL S    + F+H  EA HGDLG+I   D ++ +++S
Sbjct: 129 LTSGKLIVIGVGKSGHIGKKLVATLQSLDIRAVFLHPTEALHGDLGIIDAHDTLLFITFS 188

Query: 122 GSSDELKAILYYARRFSIPLIAITS 146
           G + EL  +L +    ++P I +TS
Sbjct: 189 GKTQELMLMLPHLDD-TLPTILLTS 212


>gi|300122382|emb|CBK22953.2| unnamed protein product [Blastocystis hominis]
          Length = 544

 Score = 68.2 bits (165), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 80/152 (52%), Gaps = 6/152 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ ++  G +G +G +LA++L S G  S FV A E +HGDLG + + D ++++S SG ++
Sbjct: 393 KLFVSAEGSAGAVGLRLAASLTSIGVSSQFVPAIEWNHGDLGHLAKGDCVLLISNSGRNE 452

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE--SCPHGLAPTTSAIMQL 183
           ++  ++   R+  + ++ +     S +   AD  L +P   E  +C     PT S + Q 
Sbjct: 453 DVLRLIEPFRKRGVVVLGMCGNKGSPLLHKADAGLFVPANTELLNC----IPTRSIVSQE 508

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           A  +AL   +   RN S +DF   HP   L +
Sbjct: 509 AAVNALVSQVCLLRNVSADDFIRNHPSDDLAS 540


>gi|322710160|gb|EFZ01735.1| sugar isomerase, KpsF/GutQ [Metarhizium anisopliae ARSEF 23]
          Length = 437

 Score = 67.4 bits (163), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++++ G+GKSGHIG KL +TL S    + F+H  EA HGDLG+I   D ++ +++SG +
Sbjct: 132 GKLIVIGVGKSGHIGKKLVATLQSLDIRAVFLHPTEALHGDLGIIDAHDTLLFITFSGKT 191

Query: 125 DELKAILYYARRFSIPLIAITS 146
            EL  +L +    ++P I +TS
Sbjct: 192 QELMLMLPHLDD-ALPTILLTS 212


>gi|156840794|ref|XP_001643775.1| hypothetical protein Kpol_480p4 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114400|gb|EDO15917.1| hypothetical protein Kpol_480p4 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 282

 Score = 67.0 bits (162), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 80/167 (47%), Gaps = 22/167 (13%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V+I G GKS  I SK+   L S G  S  +H  EA HGD+G+I   D+I + S  G +
Sbjct: 48  GKVIIVGCGKSYKIASKIVVMLNSLGMSSTLLHPIEAIHGDMGVIREGDVIWMCSHGGET 107

Query: 125 DELKAILYYARRF----SIPLIAITSENKSVVA--CHADIVLTLPKEPESCPHGL-APTT 177
            E+   +    +     +I  I ITS+ +S V+  C   IV+    + +    GL  PT 
Sbjct: 108 LEVIKFIELVHKVWSCNAITTIGITSKEESTVSRICDHKIVIKQYIKEDILQRGLKTPTI 167

Query: 178 SAIMQLAIGDALAIALLES----------RNFSENDFYVLHPGGKLG 214
           S    L + D + +++ E           R F++N     HPGG +G
Sbjct: 168 STSSMLIVLDCIVMSMSEVYYNYDYESRLRFFNKN-----HPGGSIG 209


>gi|150008997|ref|YP_001303740.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
           ATCC 8503]
 gi|255014828|ref|ZP_05286954.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
 gi|256841002|ref|ZP_05546509.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|262383887|ref|ZP_06077023.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|298375771|ref|ZP_06985727.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|301312047|ref|ZP_07217969.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
 gi|149937421|gb|ABR44118.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
           ATCC 8503]
 gi|256736845|gb|EEU50172.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|262294785|gb|EEY82717.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|298266808|gb|EFI08465.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|300830149|gb|EFK60797.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
          Length = 491

 Score = 65.9 bits (159), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 22/197 (11%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFS--E 201
           D VL +P   E  P  +              P  SA M       LAIA+          
Sbjct: 16  DDVLLIPAYSEVLPRNVDLTTKFSRNITLNIPMVSAAMDTVTEAKLAIAIAREGGIGVIH 75

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +  +     ++ T+    + +++  D + + K G  + DA+ +++E + G + VVDEG 
Sbjct: 76  KNMTIAEQAKQVQTVKRAENGMIY--DPVTITK-GKRVADALAMMAEYKIGGIPVVDEGG 132

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVV 320
            L GI+T  D+   F KD+N  S+++VM K   V+  + T +  A Q+L++H I  L VV
Sbjct: 133 YLVGIVTNRDL--RFEKDMNR-SIDEVMTKENLVVTGQSTDMEAAAQILQEHKIEKLPVV 189

Query: 321 DDCQKAIGIVHFLDLLR 337
           D   K IG++ + D+ +
Sbjct: 190 DSHNKLIGLITYKDITK 206


>gi|307595012|ref|YP_003901329.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550213|gb|ADN50278.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 157

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           VK   PL + I I++EK  G + V DE  +  G+ TE D+ R    +  LN L+V DVM 
Sbjct: 17  VKDDKPLTEVIKIMNEKNIGSIIVTDEEGRAIGVFTERDLLRLVASNVSLNALTVGDVMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +N  VI ED  L  A+ ++ +H I  L +VD+  K IGIV   D
Sbjct: 77  RNVIVIEEDASLIKAVHIMAKHGIRHLPIVDEDGKVIGIVSIRD 120


>gi|45199062|ref|NP_986091.1| AFR544Wp [Ashbya gossypii ATCC 10895]
 gi|44985137|gb|AAS53915.1| AFR544Wp [Ashbya gossypii ATCC 10895]
          Length = 337

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/164 (32%), Positives = 82/164 (50%), Gaps = 14/164 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++V    GKS  I +K  +T  S G P+  +H  EA HGD+G++   D +++ S SG +D
Sbjct: 99  KLVFVACGKSFRIIAKTVATCHSLGIPAAVLHPTEAMHGDIGIVADGDALLLCSHSGETD 158

Query: 126 ELKAILYYARRFSI----PLIAITSENKSVVACHADIVLTLPKEP----ESCPHGL-APT 176
           EL  +  Y R   +    PLIA+T +  S +A  A  V+T+ + P         GL APT
Sbjct: 159 ELLHLAAYLRSARLAPASPLIAVTGDPASTLARRAHHVITVFQPPHLRERVVQDGLNAPT 218

Query: 177 TSAIMQLAIGDALAIALLESRN-----FSENDFYVLHPGGKLGT 215
            +  + L   D L +AL +  +        + F   HPGG +G+
Sbjct: 219 IATTLMLLALDCLVLALSDGGSPCARRRRADAFAARHPGGSIGS 262


>gi|325520924|gb|EGC99899.1| KpsF/GutQ family sugar isomerase [Burkholderia sp. TJI49]
          Length = 110

 Score = 64.7 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 45/104 (43%), Positives = 60/104 (57%), Gaps = 1/104 (0%)

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF   H
Sbjct: 4   ESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFARSH 63

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           PGG LG  L     DVM SGD +P V +   L DA+  ++ KR 
Sbjct: 64  PGGALGRRLLTYVRDVMRSGDDVPSVGLDATLSDALFQITAKRL 107


>gi|255018998|ref|ZP_05291124.1| hypothetical protein LmonF_16906 [Listeria monocytogenes FSL
           F2-515]
          Length = 144

 Score = 63.9 bits (154), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 57/102 (55%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++D++I
Sbjct: 37  VEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILI 96

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           ++S  G++ EL  ++   +     LI +T    SV+A  ADI
Sbjct: 97  LISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADI 138


>gi|207111248|ref|ZP_03245410.1| hypothetical protein HpylH_19473 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 58

 Score = 62.8 bits (151), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 26/57 (45%), Positives = 43/57 (75%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           ++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G
Sbjct: 1   KLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGG 57


>gi|330863201|emb|CBX73328.1| hypothetical protein YEW_CI09920 [Yersinia enterocolitica W22703]
          Length = 85

 Score = 61.6 bits (148), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/53 (58%), Positives = 38/53 (71%)

Query: 45 LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
          L   L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH
Sbjct: 23 LLSRLDNNFVHACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVH 75


>gi|218262310|ref|ZP_03476824.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223461|gb|EEC96111.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
           DSM 18315]
          Length = 491

 Score = 61.2 bits (147), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILED 299
           DA+ ++ E + G + VVDE   L GI+T  D+   F +D+N  SV++VM K N  V  + 
Sbjct: 112 DALGMMKEYKIGGIPVVDESDHLVGIVTNRDL--RFERDMNR-SVDEVMTKENLIVADQS 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  +L+QH I  L VVD  ++ +G++ + D+ R
Sbjct: 169 TDLEAAASILQQHKIEKLPVVDSQKRLVGLITYKDITR 206


>gi|325969246|ref|YP_004245438.1| signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708449|gb|ADY01936.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 157

 Score = 60.8 bits (146), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 2/99 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKV 295
           PLI  I I++E+  G + + DE  ++ G+ TE D+ R    + D++TL+V DVM K+  V
Sbjct: 22  PLISVIRIMNERNIGSIIITDEEGRVIGVFTERDLLRLVASNIDISTLTVGDVMTKDVIV 81

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           I +D  L  A+ ++ +H I  L +VD+  K +GI+   D
Sbjct: 82  IEQDASLIKAVHIMAKHGIRHLPIVDEDGKIVGIISIRD 120


>gi|167765435|ref|ZP_02437548.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
           43183]
 gi|167697063|gb|EDS13642.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
           43183]
          Length = 491

 Score = 60.5 bits (145), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ ++SE + G + VVD+   L GI+T  D+   F KD N   +++VM K+
Sbjct: 104 IKRGSSVADALGLMSEYKIGGIPVVDDEGHLVGIVTNRDL--RFEKDHNK-RIDEVMTKD 160

Query: 293 PKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V    T  L  A Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 161 NIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITK 206


>gi|212690533|ref|ZP_03298661.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
 gi|237708011|ref|ZP_04538492.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|237725283|ref|ZP_04555764.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D4]
 gi|265754203|ref|ZP_06089392.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
 gi|212666882|gb|EEB27454.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
 gi|229436549|gb|EEO46626.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
           5_1_36/D4]
 gi|229457997|gb|EEO63718.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|263234912|gb|EEZ20467.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
          Length = 491

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++VM K 
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL--RFEKDMDK-RIDEVMTKE 160

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T +  A Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 161 NIVTTNQSTDMEAASQILQEHKIEKLPVVDKDGKLVGLITYKDITK 206


>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
 gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
          Length = 175

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 31/145 (21%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------- 273
           +DVM + D I L +   PL +AI IL+E+R   + VVDE +KL G+I+E D+        
Sbjct: 28  ADVM-TRDPI-LARPEMPLSEAIKILAERRISGLPVVDENEKLVGVISETDLMWQEVGVT 85

Query: 274 ---------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                                R  HK L   +V +VM ++P     D  L  A +L+ + 
Sbjct: 86  PPAYIMLLDSVIYLENPGRYERELHKALGQ-TVGEVMSRDPITTTPDKSLPEAARLMHER 144

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
           +I  L V+D   KAIGI+   D++R
Sbjct: 145 SIHRLPVIDPTGKAIGILTRGDIVR 169



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 34/53 (64%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM ++P +   +  L+ A+++L +  IS L VVD+ +K +G++   DL+
Sbjct: 26  TVADVMTRDPILARPEMPLSEAIKILAERRISGLPVVDENEKLVGVISETDLM 78


>gi|126459756|ref|YP_001056034.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249477|gb|ABO08568.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 138

 Score = 60.1 bits (144), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + EK+ G V VVDE  K  GIITE D+     R    D     V   M +NP  I E+ L
Sbjct: 37  MYEKKVGSVVVVDEEGKPVGIITERDMVYVCARGLSPDTPAWMV---MTENPVTINENAL 93

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +T AM+ +RQ +I  L VVD   K +GI+ F D+L
Sbjct: 94  VTEAMEKMRQLDIRHLPVVDSTGKLVGIISFRDVL 128


>gi|160890575|ref|ZP_02071578.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
 gi|317479883|ref|ZP_07939000.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
 gi|156859574|gb|EDO53005.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
 gi|316903957|gb|EFV25794.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
          Length = 491

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N      ++ E+
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL--RFEKDMNKRIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP   +E        Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPTTDME-----AVSQILQEHRIEKLPVVDKDNKLVGLITYKDITK 206


>gi|270295712|ref|ZP_06201912.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
 gi|270273116|gb|EFA18978.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
          Length = 491

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N      ++ E+
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL--RFEKDMNKRIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP   +E        Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPTTDME-----AVSQILQEHRIEKLPVVDKDNKLVGLITYKDITK 206


>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
 gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
          Length = 152

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 31/147 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----- 273
             +DVM     +  VK   PL +AI IL+E+R   + VVD   KL GII+E D+      
Sbjct: 4   TVADVMSHNPVV--VKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQETG 61

Query: 274 -----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                  R+ HK L   +V +VM KNP  +  +  +  A QL+ 
Sbjct: 62  VTPPAYIMFLDSVIYLQNPAVYERDLHKALGQ-TVGEVMSKNPVTVSPEKSVKQAAQLMH 120

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N+  L V+DD  + IGI+   D++R
Sbjct: 121 DRNVHRLPVLDDAGQVIGILTRGDIIR 147


>gi|290769657|gb|ADD61437.1| putative protein [uncultured organism]
          Length = 491

 Score = 59.3 bits (142), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N      ++ E+
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDL--RFEKDMNKRIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP   +E        Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPTTDME-----AVSQILQEHRIEKLPVVDKDNKLVGLITYKDITK 206


>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
 gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
           [Anabaena variabilis ATCC 29413]
          Length = 152

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 67/147 (45%), Gaps = 31/147 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----- 273
             +DVM     +  VK   PL +AI IL+E+R   + VVD   KL GII+E D+      
Sbjct: 4   TVADVMSHNPVV--VKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQETG 61

Query: 274 -----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                  R+ HK L   +V +VM KNP  +  +  +  A QL+ 
Sbjct: 62  VTPPAYIMFLDSVIYLQNPAVYERDLHKALGQ-TVGEVMSKNPVTVSPEKSVKQAAQLMH 120

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N+  L V+DD  + IGI+   D++R
Sbjct: 121 DRNVHRLPVLDDAGQVIGILTRGDIIR 147


>gi|226940939|ref|YP_002796013.1| Sugar phosphate isomerase (Involved in capsule formation) protein
           [Laribacter hongkongensis HLHK9]
 gi|226715866|gb|ACO75004.1| Sugar phosphate isomerase (Involved in capsule formation) protein
           [Laribacter hongkongensis HLHK9]
          Length = 101

 Score = 59.3 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 3/99 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLL 302
           +S K  G  AVVD G +  GI T+GD+ R   +   D + ++V +VM  +PK I  D L 
Sbjct: 3   ISRKGLGLTAVVDTGGRPLGIFTDGDLRRLIDRGVVDFHHMTVGEVMHVHPKTIASDRLA 62

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T A++ + Q+ I+ L+V+D+  +  G ++  DL R G++
Sbjct: 63  TEAVKEMEQNKINGLLVLDNQGRVEGALNLHDLFRAGVV 101


>gi|119871878|ref|YP_929885.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673286|gb|ABL87542.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 139

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 38/100 (38%), Positives = 55/100 (55%), Gaps = 7/100 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + E + G V +VDE  K  GIITE D+     R+   D     V   M +NP VI ED L
Sbjct: 37  MYENKVGSVVIVDEEGKPVGIITERDLVYVVARSLAPDTPAWMV---MTENPIVIREDAL 93

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +T AM+ +R  NI  L VVD   + +G++ F D++ F ++
Sbjct: 94  ITEAMEKMRVQNIRHLPVVDTSGRLVGMLSFRDVVDFVVM 133


>gi|332885979|gb|EGK06223.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
           22836]
          Length = 491

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDT 300
           A+ +++E + G + VVD   +L GI+T  D+   F +D+N L ++DVM K N     + T
Sbjct: 113 ALAMMAEYKIGGIPVVDTNNRLVGIVTNRDL--RFRRDMNEL-IDDVMTKENIITTRQTT 169

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A  +L+QH I  L VVD   K IG++ + D+ +
Sbjct: 170 DLEAAADILQQHKIEKLPVVDSDNKLIGLITYKDITK 206


>gi|213023436|ref|ZP_03337883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 129

 Score = 58.9 bits (141), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 1/120 (0%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN 281
           +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R        
Sbjct: 10  LMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGAL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 70  TTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 129


>gi|224025972|ref|ZP_03644338.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
           18228]
 gi|224019208|gb|EEF77206.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
           18228]
          Length = 491

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I+SE + G + VVD+   L GI+T  D+   F KD+N   +++VM K 
Sbjct: 104 IKRGSTVKDALDIMSEYKIGGIPVVDDENYLVGIVTNRDL--RFEKDMNK-RIDEVMTKE 160

Query: 293 PKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  E  T +  A ++L+++ I  L VVD   K IG++ + D+ +
Sbjct: 161 NIVTTEQGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDITK 206


>gi|218128450|ref|ZP_03457254.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
 gi|317475724|ref|ZP_07934983.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
           1_2_48FAA]
 gi|217989341|gb|EEC55654.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
 gi|316908107|gb|EFV29802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 491

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KD N   +++VM K+
Sbjct: 104 IKRGSSVADALGLMAEYKIGGIPVVDDEGHLVGIVTNRDL--RFEKDHNK-RIDEVMTKS 160

Query: 293 PKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V    T  L  A Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 161 NIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITK 206


>gi|150003021|ref|YP_001297765.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
           8482]
 gi|149931445|gb|ABR38143.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
           8482]
          Length = 482

 Score = 58.5 bits (140), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++VM K 
Sbjct: 95  IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL--RFEKDMDK-RIDEVMTKE 151

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T +  A ++L++H I  L VVD   K +G++ + D+ +
Sbjct: 152 NIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDITK 197


>gi|312891857|ref|ZP_07751362.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis
           DSM 18603]
 gi|311295648|gb|EFQ72812.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis
           DSM 18603]
          Length = 489

 Score = 58.5 bits (140), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 57/101 (56%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  I+ E R G + ++D  +KLKGIIT  D+   F K++ +  + +VM K   VI  
Sbjct: 110 LADAFKIMKEFRIGGIPIIDSDRKLKGIITNRDL--RFQKNM-SRPIAEVMTKENLVIAP 166

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E T L  A ++L+ + I  L VVD   +  G++ F D+ +F
Sbjct: 167 EGTTLVQAEEILQNYKIEKLPVVDQNGRLSGLITFKDIQKF 207


>gi|302348762|ref|YP_003816400.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Acidilobus saccharovorans
           345-15]
 gi|302329174|gb|ADL19369.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Acidilobus saccharovorans
           345-15]
          Length = 147

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 9/123 (7%)

Query: 222 DVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
           D+MH+    P VK+    P+ +A  I+ +K  G + +VD+   L GI+T+ DI R    K
Sbjct: 12  DIMHT----PPVKVTPITPVNEAAQIMMDKGVGSLIIVDDSDNLIGIVTKTDIVREVVAK 67

Query: 279 DLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
            L+  + V ++M KNP  +LED  +  A +L+  HNI  L V+  +  K +G++   D++
Sbjct: 68  GLSRNVPVGNIMTKNPYFVLEDYTVKEAAELMGTHNIGHLPVLSRNNMKPVGMISKRDII 127

Query: 337 RFG 339
           R  
Sbjct: 128 RLA 130


>gi|261401804|ref|ZP_05987929.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
 gi|269208081|gb|EEZ74536.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
          Length = 102

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           AI  +SEK  G +AV D   +LKG+ T+GD+ R F +   L  L VE++M   PK I  +
Sbjct: 1   AIVSMSEKGLGMLAVTDAQGRLKGVFTDGDLRRLFQRRDSLAGLQVEEMMHTQPKTISAE 60

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A+++++ ++I+ L+V D     IG ++  DLL   I+
Sbjct: 61  RLAAEALKVMQANHINGLLVTDADGVLIGALNMHDLLAARIV 102


>gi|254883669|ref|ZP_05256379.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
 gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
 gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
 gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
          Length = 491

 Score = 58.2 bits (139), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++VM K 
Sbjct: 104 IKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDL--RFEKDMDK-RIDEVMTKE 160

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T +  A ++L++H I  L VVD   K +G++ + D+ +
Sbjct: 161 NIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDITK 206


>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
           azollae' 0708]
 gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
           azollae' 0708]
          Length = 152

 Score = 57.8 bits (138), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 31/147 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----- 273
             +DVM S     LV+   PL +AI IL+EKR   + V+D+  K+ GII+E D+      
Sbjct: 4   TVADVMSSNPI--LVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLMWQETG 61

Query: 274 -----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                  R+ HK L   +V +VM K+P  I  D  L  A ++++
Sbjct: 62  VTPPAYIMFLDSVIYLQNPGAYERDLHKALGQ-TVGEVMSKSPITITPDKPLKEAAKIIQ 120

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ +  L V+D   + IGI+   D++R
Sbjct: 121 EYKVHRLPVLDSTGQVIGILTRGDIIR 147


>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
           proteins [Raphidiopsis brookii D9]
 gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
           proteins [Raphidiopsis brookii D9]
          Length = 152

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 29/134 (21%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------ 273
           +V    PL  AI IL+EK+   + VVD+  KL GII+E D+                   
Sbjct: 15  MVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLMWQETGITPPAYIMFLDSV 74

Query: 274 ----------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                     R+ HK L   +V +VM  NP  I  D  L  A ++++ H +  L VVDD 
Sbjct: 75  IYLQNPATYERDLHKALGQ-TVGEVMSNNPITISPDQSLKAAAKIIQDHKVRRLPVVDDS 133

Query: 324 QKAIGIVHFLDLLR 337
              IGI+   D++R
Sbjct: 134 ATVIGILTRGDIIR 147



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V  VM  NP ++   T L  A+Q+L +  IS L VVDD  K +GI+   DL+
Sbjct: 4   TVAQVMTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLM 56


>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
 gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
           [Trichodesmium erythraeum IMS101]
          Length = 153

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 33/146 (22%)

Query: 221 SDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------ 273
           S+VM S    P+ VK   PL +AI IL+EK    + VVD+  KL GI++E D+       
Sbjct: 7   SEVMSSN---PITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQESGV 63

Query: 274 ----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                 +  HK L   +VE++M KNP        L+   +L+ +
Sbjct: 64  TPPPYIMLLDSIIFLENPGRYEKEIHKALGE-TVEEIMTKNPLTTRSQERLSATAKLMNE 122

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
            +I  L VVD+  K IGI+   D++R
Sbjct: 123 RSIHRLPVVDENGKVIGILTRGDIIR 148



 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM  NP  +   T L  A+++L + +IS L VVDD  K +GIV   DL+
Sbjct: 6   VSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLM 57


>gi|118431896|ref|NP_148644.2| hypothetical protein APE_2489.1 [Aeropyrum pernix K1]
 gi|116063219|dbj|BAA81505.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 148

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V ASD+M +   +  VK   P+  A  ++ E   G V VVD+  +L+GI+TE DI     
Sbjct: 13  VRASDIMIT--EVVTVKPDDPVTRAAKLMVENLIGSVLVVDDEGRLRGIVTERDIVYVVS 70

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D     V ++M +NP V+  D  L   ++ + + N+  L VVD+    +GI+ F D+
Sbjct: 71  EAWDPTKHRVWEIMTENPIVVRPDDDLLTVVRKMSETNVRHLPVVDEKGAPVGIISFRDV 130

Query: 336 LRF 338
           L F
Sbjct: 131 LDF 133


>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
 gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 158

 Score = 57.4 bits (137), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 10/128 (7%)

Query: 218 VCASDVMHSGD--SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V   D+M S    ++P+  +     +A  I+ E R G + VV+E   L GI+T+ DI R 
Sbjct: 10  VLVRDIMSSPPITTLPMTSVK----EAAKIMLENRVGSLIVVNERNTLLGILTKTDIIRE 65

Query: 276 FHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVH 331
                 D  ++ V D+M +NP  +  D  +  A  L+ +HNI  L V+D + +K +GIV 
Sbjct: 66  VVAKGLDPESVRVGDIMTRNPYYVYTDDSVERAASLMGEHNIGHLPVLDPETEKPVGIVT 125

Query: 332 FLDLLRFG 339
             D+++  
Sbjct: 126 KTDIVKLA 133


>gi|326483812|gb|EGE07822.1| sugar isomerase [Trichophyton equinum CBS 127.97]
          Length = 455

 Score = 57.4 bits (137), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 22/114 (19%)

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA-------------ILYYARRFSIPL 141
           F+H  EA HGDLGM+   D ++ +++SG + EL               I  Y +  S PL
Sbjct: 113 FLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPPTTSVIVITAYKQPSSCPL 172

Query: 142 IAITSENKSVVACHADIVLTLP-KEPESCPHGL-APTTSAIMQLAIGDALAIAL 193
           +A +S   +       I+L  P  EPE    G+ APT+S  + LA+GDALA+A+
Sbjct: 173 LAGSSNANT-------ILLPSPIHEPEEVSFGVCAPTSSTTVALAVGDALALAV 219


>gi|145591545|ref|YP_001153547.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283313|gb|ABP50895.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 139

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 7/98 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGD----IFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + E + G   +VD+  K  GIITE D    I R    D     V   M +NP VI +D L
Sbjct: 37  MYENKVGSAVIVDDEGKAIGIITERDLVYVIARGLSPDTPAWMV---MTENPIVIDQDAL 93

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  AM+ +R+ NI  L VVD   K +G+V F D++ F 
Sbjct: 94  VVEAMEKMRELNIRHLPVVDKAGKVVGVVSFRDIVDFA 131


>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
           proteins [Cylindrospermopsis raciborskii CS-505]
 gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
           proteins [Cylindrospermopsis raciborskii CS-505]
          Length = 152

 Score = 57.0 bits (136), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 61/134 (45%), Gaps = 29/134 (21%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------ 273
           +V    PL  AI IL+EK+   + VVD+  KL GII+E D+                   
Sbjct: 15  MVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLMWQETGITPPAYIMFLDSV 74

Query: 274 ----------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                     R+ HK L   +V +VM  NP  I  D  L  A ++++ H +  L VVDD 
Sbjct: 75  IYLQNPATYERDLHKALGQ-TVGEVMSNNPITISPDQSLKTAAKIIQDHKVRRLPVVDDA 133

Query: 324 QKAIGIVHFLDLLR 337
              IGI+   D++R
Sbjct: 134 GTVIGILTRGDIIR 147



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V  VM  NP ++   T L  A+Q+L +  +S L VVDD  K +GI+   DL+
Sbjct: 4   TVAQVMTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLM 56


>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
 gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
          Length = 165

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 31/147 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----- 273
             +D+M + D I +++   PL +AI IL+EKR   + VVD+  KL GII+E D+      
Sbjct: 17  TVTDIM-TRDPI-VLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETDLMWQETG 74

Query: 274 -----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                  R  HK L   +V +VM KNP  I  +  +  A QL+ 
Sbjct: 75  VTPPAYIMFLDSVIYLQNPATYDRELHKALGQ-TVGEVMSKNPVTIAPEKTVKEAAQLMH 133

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++  L V+D   + +GIV   D++R
Sbjct: 134 DRSVHRLPVIDSQSQVVGIVTRGDIVR 160


>gi|255011714|ref|ZP_05283840.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis 3_1_12]
 gi|313149549|ref|ZP_07811742.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
 gi|313138316|gb|EFR55676.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
          Length = 491

 Score = 56.6 bits (135), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F ++++   +++VM K 
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL--RFERNMDK-RIDEVMTKE 160

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+ H I  L VVD   K IG+V + D+ +
Sbjct: 161 NLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDITK 206


>gi|20095099|ref|NP_614946.1| sugar phosphate isomerase [Methanopyrus kandleri AV19]
 gi|19888387|gb|AAM02876.1| Predicted sugar phosphate isomerase [Methanopyrus kandleri AV19]
          Length = 180

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 74/153 (48%), Gaps = 12/153 (7%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV-HAAEASHGDLGMITRDDLI 115
           VEKI+  +G + I G+G++G IG   A  L   G   + V H+ E +      I  DDL+
Sbjct: 35  VEKIRNDRG-IFIVGMGRTGLIGECFAVRLVQMGARCYVVGHSTERA------IKPDDLL 87

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I LS SG++  +      A+     ++A+T    S +A  AD+V+ LP EPE     +  
Sbjct: 88  IALSVSGNTAFVNYAADVAKDEGADVLAVTMNADSKIAEKADVVVVLP-EPEEI---ILR 143

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           T S ++ L+  D     L +     E+D +  H
Sbjct: 144 TFSEMLMLSFLDGFTAQLAKELGVDESDMWERH 176


>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
           36-108]
 gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
           36-108]
          Length = 491

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KDL+      ++ E+
Sbjct: 104 IKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDL--RFEKDLSKRIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP      T +    Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPT-----TDMDAVSQILQEHRIEKLPVVDKDNKLVGLITYKDITK 206


>gi|189463688|ref|ZP_03012473.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
           17393]
 gi|189438638|gb|EDV07623.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
           17393]
          Length = 491

 Score = 56.6 bits (135), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E R G + VVD+ + L GI+T  D+   F +D+N      ++ E+
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL--RFVRDMNKHIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP   +E        Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPTTDME-----AVSQILQEHRIEKLPVVDKEGKLVGLITYKDITK 206


>gi|170289878|ref|YP_001736694.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170173958|gb|ACB07011.1| putative signal-transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 144

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 55/98 (56%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILE 298
           DA  ++ E R G V +VD   KLKGI+T+ D+     + L    +SV+++M +NP     
Sbjct: 32  DAFKVMWENRIGSVLIVDSDGKLKGIVTQRDLLYAGCRGLIGKNVSVKEIMSENPITAKP 91

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              L  A++ +R +++S L VVDD  + IGI    D++
Sbjct: 92  SDSLQEAVRRMRVNDVSHLPVVDDQGRPIGIFSMRDVI 129



 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 35/58 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +LS+ED M++NP  + E+  +  A +++ ++ I  +++VD   K  GIV   DLL  G
Sbjct: 10  SLSLEDFMVRNPISLPENASVDDAFKVMWENRIGSVLIVDSDGKLKGIVTQRDLLYAG 67


>gi|329962623|ref|ZP_08300571.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
           12057]
 gi|328529654|gb|EGF56552.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
           12057]
          Length = 491

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD++   +++VM K+
Sbjct: 104 IKRGSTVADALALMAEYKIGGIPVVDDEKYLVGIVTNRDL--RFEKDMDK-RIDEVMTKD 160

Query: 293 PKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    T  +    Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 161 NIITTNPTTDMEAVSQILQEHRIEKLPVVDKENKLVGLITYKDITK 206


>gi|330981134|gb|EGH79237.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aptata
          str. DSM 50252]
          Length = 70

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 4/67 (5%)

Query: 24 VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
          +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG+K+A
Sbjct: 8  IQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIGNKIA 63

Query: 84 STLASTG 90
          +TLASTG
Sbjct: 64 ATLASTG 70


>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
 gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 153

 Score = 56.2 bits (134), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           ++DA   +++   G V VVD+   + GI+TEGDI R       D +   V DVM  NP  
Sbjct: 31  VVDAARKMAKYSIGSVVVVDDKGTILGILTEGDIVRRVVARGLDPSRTLVRDVMTTNPVT 90

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           I  D  L  A + +++  I  L VV++  + +GI+   D++R  
Sbjct: 91  IYSDATLAAAAEYMKRKGIGHLPVVNEQGRLVGIITKTDIVRLA 134


>gi|294672823|ref|YP_003573439.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
 gi|294473021|gb|ADE82410.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
          Length = 493

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 7/110 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +IPL   G  +  A+ I+SE   G + VVD+ ++L GI+T  D+   F + L+   VE++
Sbjct: 104 TIPL---GSTVAQALEIMSEYHIGGIPVVDDDRRLVGIVTNRDL--RFERRLDR-PVEEI 157

Query: 289 MIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K   V   + T LT A Q+L+++ I  L VVD   + IG++ + D+ +
Sbjct: 158 MSKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLIGLITYKDITK 207


>gi|329957340|ref|ZP_08297860.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
           12056]
 gi|328523053|gb|EGF50156.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
           12056]
          Length = 491

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ ++SE + G + VVD+   L GI+T  D+   F KD  +  +++VM K 
Sbjct: 104 IKRGSSVADALDLMSEYKIGGIPVVDDEGYLVGIVTNRDL--RFEKD-RSKRIDEVMTKK 160

Query: 293 PKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V    T  L  A Q+L+++ I  L VVD   K +G++ + D+ +
Sbjct: 161 NIVTTNQTTDLEAAAQILQEYKIEKLPVVDKDNKLVGLITYKDITK 206


>gi|198276171|ref|ZP_03208702.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
 gi|198270983|gb|EDY95253.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
          Length = 491

 Score = 56.2 bits (134), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KDLN   +++VM K 
Sbjct: 104 IKRGSVVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL--RFEKDLNK-RIDEVMTKE 160

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  E  T +  A ++L+++ I  L VVD   K IG++ + D+ +
Sbjct: 161 NIVTTEPGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDITK 206


>gi|53715359|ref|YP_101351.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
 gi|60683328|ref|YP_213472.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis NCTC 9343]
 gi|253567248|ref|ZP_04844698.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|265767846|ref|ZP_06095378.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
 gi|52218224|dbj|BAD50817.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
 gi|60494762|emb|CAH09568.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis NCTC 9343]
 gi|251944079|gb|EES84598.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|263252518|gb|EEZ24046.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
 gi|301164817|emb|CBW24377.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis 638R]
          Length = 491

 Score = 56.2 bits (134), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F ++++   +++VM K 
Sbjct: 104 IKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDL--RFERNMDK-RIDEVMTKE 160

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+ H I  L VVD   K IG+V + D+ +
Sbjct: 161 NLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDITK 206


>gi|14600580|ref|NP_147097.1| hypothetical protein APE_0267 [Aeropyrum pernix K1]
 gi|5103661|dbj|BAA79182.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 143

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 62/110 (56%), Gaps = 2/110 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           +++G  + +A  +++E+  G + VVD+   +KGI+TE DI  +    K      VED+M 
Sbjct: 26  IEVGRSIAEAARLMAERGVGSLIVVDKQGLVKGILTERDIINSLASGKACAEGKVEDIMS 85

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +NP V   D  L + ++ +R  NI  + V+D+  + +G++   D++  G+
Sbjct: 86  RNPIVASPDDDLEIIIEKMRDMNIRHIPVIDEDGRPLGMISVRDIIDLGV 135


>gi|332829599|gb|EGK02245.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 491

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 58/98 (59%), Gaps = 6/98 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--ED 299
           A+ +++E + G + VVD    L GI+T  D+   F +D+N L ++DVM K+ ++I   + 
Sbjct: 113 ALAMMAEFKIGGIPVVDANNYLVGIVTNRDL--RFRRDMNQL-IDDVMTKD-RIITTRQS 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  +L+QH I  L VVD   + IG++ + D+ +
Sbjct: 169 TDLEAAADILQQHKIEKLPVVDSENRLIGLITYKDITK 206


>gi|159041685|ref|YP_001540937.1| signal transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920520|gb|ABW01947.1| putative signal transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 295

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 2/117 (1%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM     + +VK   PL     ++++++   + VV++  +L G+IT  D+ R F     
Sbjct: 176 DVMTK--ELAVVKHDEPLTSVAKLIADRKIRALPVVNDNGELIGLITSSDLARAFSDGAL 233

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T  V+D M     +I  D  +  AM+L+  +NI  L+V++  QK +GIV   D+LR+
Sbjct: 234 TALVKDYMRHEVPIISWDRDIYDAMRLMMSYNIGRLIVINQEQKPVGIVTRTDILRY 290


>gi|196234157|ref|ZP_03132990.1| Chloride channel core [Chthoniobacter flavus Ellin428]
 gi|196221808|gb|EDY16345.1| Chloride channel core [Chthoniobacter flavus Ellin428]
          Length = 580

 Score = 55.8 bits (133), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 39/111 (35%), Positives = 56/111 (50%), Gaps = 10/111 (9%)

Query: 227 GDSIPLVKIGCPL------IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
           G+ IP++    PL      I A      +R G + +VDE Q+L GIIT  D+ R    + 
Sbjct: 434 GEEIPMISAATPLREYSARIAASDPALSRRQGTL-LVDEQQRLVGIITRSDVVRALEQRS 492

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIG 328
           L TL+V +   +NP V   D  L  A+  + +HN+  L VVD  D  K +G
Sbjct: 493 LETLTVLEAGTRNPVVTFADETLYDAIAKMLKHNLGRLPVVDRHDVNKVVG 543


>gi|22299345|ref|NP_682592.1| CBS domain-containing protein [Thermosynechococcus elongatus BP-1]
 gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
          Length = 156

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 27/128 (21%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------------------- 273
            P+ +A+ ++ EK+   + VVD+  KL G+++E D+                        
Sbjct: 20  APISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREAPLEPPLYITFLGSIIYFES 79

Query: 274 -RNFHKDLN-TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             +FH+ L  TL   V+DVM  NP  I  D  ++ A +L+  H+IS L V++D  + +GI
Sbjct: 80  PESFHQHLKKTLGQQVQDVMTPNPHTINVDAPISEAARLMVNHHISRLPVLNDQGELVGI 139

Query: 330 VHFLDLLR 337
           +   DLLR
Sbjct: 140 ISRHDLLR 147


>gi|213418626|ref|ZP_03351692.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 87

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 37/53 (69%)

Query: 43 SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
          S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FF
Sbjct: 21 SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFF 73


>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
 gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
          Length = 168

 Score = 55.8 bits (133), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           + DA+T +SEK FG V VVD  +K+ G++TE D+         D    +V D+M K+P+V
Sbjct: 21  IFDAVTSMSEKNFGAVIVVDPDKKVLGVVTERDVMNKLVALELDARKTAVSDIMTKDPRV 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD 322
             E   +   ++++       L VVDD
Sbjct: 81  ASESDDMLDWLRIMSNERFRRLPVVDD 107


>gi|223984820|ref|ZP_03634929.1| hypothetical protein HOLDEFILI_02227 [Holdemania filiformis DSM
           12042]
 gi|223963194|gb|EEF67597.1| hypothetical protein HOLDEFILI_02227 [Holdemania filiformis DSM
           12042]
          Length = 148

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 21/116 (18%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------------EDVM 289
           A+ +++E+ F  + VVD GQ+L G++TEG I  N      +LSV            E VM
Sbjct: 23  ALDLMAERDFHRIPVVD-GQELVGLVTEGTIAENTPSKATSLSVYELNYLLAKSTVESVM 81

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-------HFLDLLRF 338
           IK+   I  D LL  A  L+RQH+I  L VV + +K +GI+        F+DLL +
Sbjct: 82  IKDVVTIHPDALLEEAAVLMRQHDIGCL-VVTEGRKVVGIITQNDIFEAFIDLLGY 136


>gi|332796755|ref|YP_004458255.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332694490|gb|AEE93957.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 131

 Score = 55.5 bits (132), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLL 302
           I+++   G V VVD G+ + GIITE D+ R     KDLNT   E++M  +   I ED  +
Sbjct: 28  IMTKNNVGSVIVVDHGKPI-GIITEKDVVRGLGNGKDLNT-KAEEIMTASLITIREDAPI 85

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T A+ L+R +NI  L VV++  K  GI+   D+ R
Sbjct: 86  TGALSLMRTNNIRHLPVVNEDGKLTGILSIRDVAR 120


>gi|219853222|ref|YP_002467654.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
 gi|219547481|gb|ACL17931.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
          Length = 313

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI ++ EK+ G V ++D+   L+GI+TE D+ R F  + + L+VE++M    +VI  D+
Sbjct: 138 DAINLIVEKKIGGVPILDDQGVLQGIVTERDLMRLFETERSMLTVEEIMSSPLRVIGPDS 197

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++   + + +H    L VV D +   GI+   D++++
Sbjct: 198 PISAVTREMVKHTFRRLPVVSD-EVLFGIITSTDIVKY 234


>gi|224535972|ref|ZP_03676511.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522427|gb|EEF91532.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 273

 Score = 55.1 bits (131), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           +K G  + DA+ +++E R G + VVD+ + L GI+T  D+   F +D+N      ++ E+
Sbjct: 104 IKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDL--RFVRDMNKHIDEVMTKEN 161

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  NP   +E        Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 IITTNPTTDME-----AVSQILQEHRIEKLPVVDKEGKLVGLITYKDITK 206


>gi|159041203|ref|YP_001540455.1| signal-transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920038|gb|ABW01465.1| putative signal-transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 143

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 7/112 (6%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK--DLNTLSVED 287
           ++K+G P+++AI ++++   G V +VD  E +K+ G+I+E D+ R   K  D++  +VE 
Sbjct: 14  VIKVGSPVMEAIKLMADNNVGLVVIVDSPENKKVLGVISERDVIRALAKGIDISKATVEQ 73

Query: 288 V--MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V  M     V   D + TVA +L+ +  +  ++V+DD  + + ++   DLL+
Sbjct: 74  VGTMGNIVSVKYYDYITTVA-RLMNERQVRHVVVIDDDNRVVSVISIRDLLK 124


>gi|296109539|ref|YP_003616488.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 184

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 5/102 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV--EDVMIKNPKVIL 297
           DA  I+ EK  G V VV E +K  GI+TE DI +    K+L    V  E+VM KN   I 
Sbjct: 28  DAANIMCEKDIGAVVVV-ENKKPVGILTERDILKKVVAKNLKPKEVLVEEVMTKNIITIP 86

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++T LT A +++ +HN+  L VV++  + +GI+   D++R  
Sbjct: 87  KNTTLTEAAKIMSKHNVKRLPVVEN-NEVVGIITQDDIVRVS 127


>gi|289804781|ref|ZP_06535410.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 75

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 43 SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
          S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP FF
Sbjct: 21 SRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPVFF 73


>gi|171186207|ref|YP_001795126.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170935419|gb|ACB40680.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 1/94 (1%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTV 304
           + E + G V VVD+  +  GI+TE D+     + L     V  VM ++P VI E+ L+T 
Sbjct: 37  MYENKVGSVVVVDDEGRPVGIVTERDLVYVVARALAPDTPVWMVMTEDPVVINENALVTE 96

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           AM+ +RQ +I  L VVD   K +G+V F D++ F
Sbjct: 97  AMEKMRQLDIRHLPVVDSAGKLVGMVSFRDIVDF 130


>gi|18313720|ref|NP_560387.1| hypothetical protein PAE2961 [Pyrobaculum aerophilum str. IM2]
 gi|18161274|gb|AAL64569.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 7/97 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + E R G V ++D+  K  GI+TE D+     R    D     V   M +NP VI E+ L
Sbjct: 37  MYENRVGSVVIIDDEGKPIGIVTERDMVYVLARALPPDTPAWMV---MTENPVVINENAL 93

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  AM  +R+ NI  L VVD   K +G+V F D++ F
Sbjct: 94  VIEAMDKMRELNIRHLPVVDQSGKVVGMVSFRDIVDF 130


>gi|218514828|ref|ZP_03511668.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli 8C-3]
          Length = 66

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 30/63 (47%), Positives = 44/63 (69%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++L  L+V+D+M K PK +    L T A+ LL QH+I  L+VVDD ++ +G+VHF DLLR
Sbjct: 3   RNLAELAVDDIMTKTPKTVKPTMLATAALALLNQHSIGALIVVDDDRRPLGLVHFHDLLR 62

Query: 338 FGI 340
            G+
Sbjct: 63  IGV 65


>gi|124028010|ref|YP_001013330.1| hypothetical protein Hbut_1148 [Hyperthermus butylicus DSM 5456]
 gi|123978704|gb|ABM80985.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 283

 Score = 55.1 bits (131), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 53/93 (56%), Gaps = 5/93 (5%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFR----NFH-KDLNTLSVEDVMIKNPKVILEDTLLTV 304
           R G V V+DE +K  GI+T  D  R     F  K L  ++V D+M ++P  I ++  L  
Sbjct: 35  RIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKPLVNIAVADIMTRDPVTIRDNRSLRE 94

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A +L+ +H +S L VVD+  K +GI+   D++R
Sbjct: 95  AARLMIKHGVSGLPVVDEDGKLVGIITKSDIVR 127


>gi|15922120|ref|NP_377789.1| hypothetical protein ST1806 [Sulfolobus tokodaii str. 7]
 gi|15622908|dbj|BAB66898.1| 143aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 143

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 5/110 (4%)

Query: 231 PLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVE 286
           P++K+  G    DA+ I++++  G + + D G KL GI TE D+ R   +D  LN    E
Sbjct: 13  PIIKVQKGTSARDAVRIMAKENVGSILIFD-GDKLIGIFTERDLLRAVARDEDLNKPVEE 71

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               KN   I ED+ + VA +L+ +H I  L+VV+   K IG+V   D++
Sbjct: 72  LGTTKNLITIDEDSPINVAAELMSKHCIRHLIVVNKSGKPIGVVSIRDII 121


>gi|313639393|gb|EFS04268.1| SIS domain-containing protein [Listeria seeligeri FSL S4-171]
          Length = 110

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 44/71 (61%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI    G++V++G G SG    KL  +      P+ F+  ++A HG LG++ +DD++I
Sbjct: 37  VEKIANCTGKIVVSGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQQDDILI 96

Query: 117 VLSWSGSSDEL 127
           ++S  G++ EL
Sbjct: 97  LISKGGNTGEL 107


>gi|323935738|gb|EGB32052.1| gutQ protein [Escherichia coli E1520]
          Length = 85

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 43 SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
          S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+F 
Sbjct: 21 SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFL 73


>gi|333029341|ref|ZP_08457402.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprosuis DSM
           18011]
 gi|332739938|gb|EGJ70420.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprosuis DSM
           18011]
          Length = 490

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 4/103 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  + DA+ ++ E   G + VVDE + L GI+T  D+   F +D++ L V+ VM K   V
Sbjct: 107 GSTVQDALDLMREYHIGGIPVVDEERNLVGIVTNRDL--RFEQDMDKL-VDVVMTKEGLV 163

Query: 296 ILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  T L  A ++L++H I  L VVD   K IG++ + D+ +
Sbjct: 164 TTDQSTDLEAAAKILQEHKIEKLPVVDKNNKIIGLLTYKDITK 206


>gi|124485276|ref|YP_001029892.1| hypothetical protein Mlab_0451 [Methanocorpusculum labreanum Z]
 gi|124362817|gb|ABN06625.1| protein of unknown function DUF39 [Methanocorpusculum labreanum Z]
          Length = 502

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 45/80 (56%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+D    L GI+T  D+ + F  D   L+V ++M KN   I  D  +  A + L+QHNI 
Sbjct: 413 VIDAENHLIGIVTTYDVSKAFANDAQDLTVSEIMTKNVITIAPDAPVDFAARTLQQHNIG 472

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L+V+D  +  +G+++  DL
Sbjct: 473 ALVVIDASRHILGMLNSYDL 492


>gi|15922679|ref|NP_378348.1| hypothetical protein ST2348 [Sulfolobus tokodaii str. 7]
 gi|15623469|dbj|BAB67457.1| 133aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 133

 Score = 54.7 bits (130), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/103 (40%), Positives = 54/103 (52%), Gaps = 4/103 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPK 294
             L D   +++EK  G V VVD G K  GIITE DI +   K   L T   E+ M  +  
Sbjct: 21  AKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLET-KAEEFMTASLI 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I ED+ +T A+ L+RQ NI  L VVDD     GI+   D+ R
Sbjct: 79  TIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121


>gi|332755576|gb|EGJ85939.1| protein gutQ domain protein [Shigella flexneri 2747-71]
          Length = 85

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/53 (54%), Positives = 36/53 (67%)

Query: 43 SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
          S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+F 
Sbjct: 21 SRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFL 73


>gi|257055770|ref|YP_003133602.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Saccharomonospora viridis DSM 43017]
 gi|256585642|gb|ACU96775.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Saccharomonospora viridis DSM 43017]
          Length = 191

 Score = 54.3 bits (129), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/123 (36%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 224 MHSGD--SIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----- 274
           MH+ +  S P+V I    PL DA+  L+E  F  + VVDE Q++ G+ITE D  R     
Sbjct: 1   MHASEIMSRPVVTISPDAPLRDAVVKLTEGGFASLPVVDEDQQVIGMITEVDALRAAEQI 60

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           N  +    L V DVM K  +V+  DT +T    L+    +  L VV++    +GIV   D
Sbjct: 61  NDGEGPPALKVSDVMTKPVEVVSPDTNITDVAHLMLTDRLRSLPVVENG-VLVGIVSRRD 119

Query: 335 LLR 337
           +LR
Sbjct: 120 VLR 122


>gi|289451043|gb|ADC93959.1| KdsD [Leptospira interrogans serovar Autumnalis]
          Length = 139

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 6/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HK 278
           +VM   DS P++K    L +A+  + +   G   +VDE  KL G++T+GDI R      K
Sbjct: 13  EVMLKPDSFPVLKETIILKEALETMGKFNLGIACIVDEDSKLLGLVTDGDIRRKLLKVQK 72

Query: 279 DLNTLSVEDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             + L V+D +   IK+P  I  D  L   + L+   ++  L VVD   + IG++H 
Sbjct: 73  PFSALFVDDALEHCIKSPVCISADAKLIDGVNLMGAKHVWDLPVVDSNHRLIGLLHL 129


>gi|187733808|ref|YP_001881446.1| phosphosugar isomerase [Shigella boydii CDC 3083-94]
 gi|187430800|gb|ACD10074.1| phosphosugar isomerase [Shigella boydii CDC 3083-94]
 gi|320185285|gb|EFW60060.1| Arabinose 5-phosphate isomerase [Shigella flexneri CDC 796-83]
 gi|332091951|gb|EGI97029.1| arabinose 5-phosphate isomerase domain protein [Shigella boydii
           3594-74]
          Length = 54

 Score = 54.3 bits (129), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 25/48 (52%), Positives = 34/48 (70%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ES P GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 2   ESLPLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 49


>gi|58337960|ref|YP_194545.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227902871|ref|ZP_04020676.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
 gi|58255277|gb|AAV43514.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227869387|gb|EEJ76808.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
          Length = 284

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/171 (28%), Positives = 80/171 (46%), Gaps = 7/171 (4%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A+++ +A  R  S++E++  G        AV KI      +++ G G SG + S +   
Sbjct: 93  AAIKNTMAA-RFESAIEATQSGLNDNSVEKAVRKIYN-SSSILVYGAGASGIVASDMYQK 150

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G    ++     +   L   T DDL+I++S  G + E+  I   A +F IP + +T
Sbjct: 151 FMRVGKNINYISDLHVALAQLASFTSDDLLILISNDGKTTEVSDIQKVADKFGIPTLLLT 210

Query: 146 SENKSVVACHADIVLTLPK--EPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +  +S VA  AD+VL      EP S   G   TTS I Q+ + D L  + +
Sbjct: 211 ANPRSFVAKKADLVLLTQDIGEP-SIRSG--ATTSLISQMFVVDVLVFSYV 258


>gi|70606254|ref|YP_255124.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68566902|gb|AAY79831.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 135

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV-EDVMIKNPKVILEDTLLT 303
           I++EK  G V +V E  K  GIITE DI R   K  N  S  E++M  +   I ED+ + 
Sbjct: 34  IMTEKNIGSV-IVTENNKPIGIITERDIVRAIGKGKNLESTAEEIMTVSLITIREDSPIA 92

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ L+RQ NI  L V++D ++ +GI+   D+ R
Sbjct: 93  GALSLMRQFNIRHLPVINDKRELVGILSIRDVAR 126


>gi|327402944|ref|YP_004343782.1| inosine-5'-monophosphate dehydrogenase [Fluviicola taffensis DSM
           16823]
 gi|327318452|gb|AEA42944.1| inosine-5'-monophosphate dehydrogenase [Fluviicola taffensis DSM
           16823]
          Length = 490

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 58/98 (59%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED- 299
           DA+ +++E + G + V+DE +KLKGIIT  D+   F K+ ++  V ++M     +  +D 
Sbjct: 112 DALNLMAEFKIGGIPVIDENKKLKGIITNRDL--RFEKN-HSRPVREIMTTENLITTKDG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L++  I  L VVD     IG++ + D+++
Sbjct: 169 TSLATAEEILQEKKIEKLPVVDGDNTLIGLITYRDIIK 206


>gi|156937999|ref|YP_001435795.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566983|gb|ABU82388.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 327

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 4/121 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+M      P+     P+++A   + E  +G V ++ +   L GI+TE D+ R   
Sbjct: 4   LTAKDIMRK--VFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAVA 61

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             KD+  + V+D+M K   V+ +D  + + +QL   + +  + V DD  + IG++   D+
Sbjct: 62  EGKDIAQIPVKDLMKKTTVVVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTDV 121

Query: 336 L 336
           +
Sbjct: 122 V 122


>gi|77737727|gb|ABB01680.1| sucrose isomerase [Leucaena leucocephala]
          Length = 53

 Score = 53.9 bits (128), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/46 (45%), Positives = 31/46 (67%)

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           CP  LAP TS  +Q+  GD +AIAL+++R  S+ D+   HP G++G
Sbjct: 1   CPFNLAPVTSTAIQMVFGDTVAIALMQARKLSKEDYASNHPAGRIG 46


>gi|327310796|ref|YP_004337693.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947275|gb|AEA12381.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 136

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPK 294
             P+ +    + EK+ G V VVDE  +  GI+TE D+     K L+    +  VM +NP 
Sbjct: 24  NTPVKEVANSMYEKKIGSVVVVDEAGRPVGIVTERDLVYVCAKGLSADTPIWMVMTENPV 83

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I ED  L  A++ +R+ N+  L VVD   K +GI+   D+L
Sbjct: 84  TIAEDAPLLDAVEKMRELNVRHLPVVDKEGKLVGILSVRDVL 125


>gi|326801032|ref|YP_004318851.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
 gi|326551796|gb|ADZ80181.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
          Length = 491

 Score = 53.9 bits (128), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA TI+ + + G + VVD  +KL GI+T  D+   F KD+    + ++M K+  V+    
Sbjct: 112 DAFTIMKDNKIGGIPVVDGEKKLVGIVTNRDL--RFQKDMER-PISELMTKDNLVVAPIG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T L  A ++L+ + I  L VVD   K +G++ F D+ +F
Sbjct: 169 TNLVKAEEILQNYKIEKLPVVDGEGKLVGLITFKDIQKF 207


>gi|147920358|ref|YP_685869.1| hypothetical protein RCIX1241 [uncultured methanogenic archaeon
           RC-I]
 gi|110621265|emb|CAJ36543.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 502

 Score = 53.5 bits (127), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
           +   + G  + DA   + + RF  + VVD+ ++L GIIT  D+ +      +D    S++
Sbjct: 388 VATTRAGVSVDDAARTIIKDRFNHLPVVDDEKRLIGIITAWDVSKAVALSKRD----SLD 443

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            VM KN   +  D  + +A++LL +HNIS L V+D  +K +GIV
Sbjct: 444 MVMTKNVVTVGPDDPVDLAVRLLEKHNISALPVIDHDRKVLGIV 487


>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
           GZfos12E1]
          Length = 187

 Score = 53.5 bits (127), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 29/127 (22%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFH----------------KD 279
           L+D  T+L E +   V V++E +++ G+I+E D+ +   NFH                +D
Sbjct: 55  LLDVATVLKENKIAGVPVLNEREEVVGVISEADVLKLLENFHWYTSIFTAHDLMNIFGED 114

Query: 280 L----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           L          + + V+DVM K P+ +  DTL+  A Q++     + L VVD+  K +GI
Sbjct: 115 LHDVQQDIEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDENDKLVGI 174

Query: 330 VHFLDLL 336
           V   D++
Sbjct: 175 VARADII 181


>gi|330835646|ref|YP_004410374.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567785|gb|AEB95890.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 141

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 3/104 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNP 293
           G P + AI +++    G V +  +G+ L GIITE DI R   +  D+N    E   +KN 
Sbjct: 19  GTPTVKAIEVMASHNIGSVVITHKGE-LAGIITERDIIRGIARGIDVNQPVEEFGTMKNL 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VI ED  +  A++ + + N+  L+VVD   K  G++   D++R
Sbjct: 78  VVIGEDETIYNAVKKMAERNLRHLIVVDKYGKLKGVISVRDIIR 121


>gi|325103873|ref|YP_004273527.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
           12145]
 gi|324972721|gb|ADY51705.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
           12145]
          Length = 489

 Score = 53.1 bits (126), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILED 299
           +A  ++ E + G + +V EG KL GI+T  D+   F KDL ++ V DVM K N     E 
Sbjct: 112 EAFKMMKEFQIGGIPIVSEGNKLVGIVTNRDL--RFQKDL-SIKVSDVMTKENLITAPEG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T L  A  +L+ H I  L VV +     G++ F D+ +F
Sbjct: 169 TTLKQAESILQDHKIEKLPVVKEDGTLSGLITFKDIQKF 207


>gi|227877703|ref|ZP_03995739.1| RpiR family transcriptional regulator [Lactobacillus crispatus
           JV-V01]
 gi|256850037|ref|ZP_05555467.1| transcriptional regulator [Lactobacillus crispatus MV-1A-US]
 gi|262047323|ref|ZP_06020280.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293381539|ref|ZP_06627529.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|227862691|gb|EEJ70174.1| RpiR family transcriptional regulator [Lactobacillus crispatus
           JV-V01]
 gi|256713009|gb|EEU28000.1| transcriptional regulator [Lactobacillus crispatus MV-1A-US]
 gi|260572297|gb|EEX28860.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290921907|gb|EFD98919.1| SIS domain protein [Lactobacillus crispatus 214-1]
          Length = 279

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 10/123 (8%)

Query: 43  SSLQGELSF-QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
           S  Q +L   Q    ++ IK+ K RV   GIG SG+   +    L   G  +F    AE 
Sbjct: 104 SETQNKLDIKQLKKIIQLIKSAK-RVYFYGIGSSGYTSLEATQRLLRMGISAF----AET 158

Query: 102 SHGDLGM----ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              ++ M    I++DDLII +S +GS+D L   +  A++    ++A+TS + S +A  AD
Sbjct: 159 ESNNMFMTSSIISKDDLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLAD 218

Query: 158 IVL 160
           IV+
Sbjct: 219 IVV 221


>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
          Length = 222

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/103 (36%), Positives = 54/103 (52%), Gaps = 7/103 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-----VEDVMIKNP 293
           +I+AI  + +K+ G + VV+   KLKGI +E D       +L  LS     VE VM KN 
Sbjct: 87  IINAIRKMVDKKIGSILVVNSENKLKGIFSERDYLSKV--NLAGLSSRESPVEQVMTKNV 144

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K I  DT    AM+++       L VVD+ +  IG+V   DL+
Sbjct: 145 KTIKSDTCTLDAMKIMTTKKFRHLPVVDNNKHIIGVVSIQDLI 187


>gi|261402513|ref|YP_003246737.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus vulcanius M7]
 gi|261369506|gb|ACX72255.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus vulcanius M7]
          Length = 176

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 11/155 (7%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S +F+  +EKI   K ++ I G+G+SG++G   A  L   G  S+FV        +    
Sbjct: 23  SEKFYLLIEKILKSK-KIFIFGVGRSGYVGRCFAMRLFHLGLNSYFVGETITPKYE---- 77

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ES 168
            +DDL+I++S SG ++ +  +   A++ +  ++AI  E  S VA  A++++ L  E  + 
Sbjct: 78  -KDDLLILISGSGKTESVLTVAKKAKKVNNNIVAIVCECGS-VAEFAELIIRLDVEKSDY 135

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            P G     +A++ L   D L   +++  N  E +
Sbjct: 136 LPMGTTFEQTAMIFL---DLLIAEIMKKLNLKERE 167


>gi|260591261|ref|ZP_05856719.1| inosine-5'-monophosphate dehydrogenase [Prevotella veroralis F0319]
 gi|260537126|gb|EEX19743.1| inosine-5'-monophosphate dehydrogenase [Prevotella veroralis F0319]
          Length = 494

 Score = 53.1 bits (126), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           D + ++K G  + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++D
Sbjct: 101 DPLTILK-GRTVKDALAMMADYHIGGIPVVDEDNHLVGIVTNRDL--RFERHLDKL-IDD 156

Query: 288 VMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K   V   + T LT A Q+L+++ I  L VVD     +G++ + D+ +
Sbjct: 157 VMTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNHLVGLITYKDITK 207


>gi|325972335|ref|YP_004248526.1| RpiR family transcriptional regulator [Spirochaeta sp. Buddy]
 gi|324027573|gb|ADY14332.1| transcriptional regulator, RpiR family [Spirochaeta sp. Buddy]
          Length = 291

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/176 (26%), Positives = 81/176 (46%), Gaps = 8/176 (4%)

Query: 25  QCALRSIIAE-KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q  + SII   ++  ++LE  L  +   Q   AV  I + +    + G+G SG +     
Sbjct: 102 QAVIHSIIQRFQQSFAALERGLDSQCLEQ---AVTMILSARS-TALFGVGASGVVAFDFM 157

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G P F+ H  +        I   D   ++S+SG +D + A     ++  +P+I+
Sbjct: 158 QKLVRLGLPVFYTHDTDLQLTAASTIRMHDCAFIISYSGENDSMIAAAKQIQKNKVPIIS 217

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           IT ++ + +   +DI + +P        G   +TS I QLA+ D L  +L+ S+N 
Sbjct: 218 ITMDSDNTIRRLSDINIVVPASERIYRQG--ASTSRINQLAVIDIL-YSLMVSKNL 270


>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
 gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
           punctiforme PCC 73102]
          Length = 154

 Score = 52.8 bits (125), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/147 (31%), Positives = 68/147 (46%), Gaps = 31/147 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----- 273
             +DVM S D I +V+   PL +AI IL+E+    + VVD+  KL GII+E D+      
Sbjct: 4   TVADVM-SRDPI-VVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLMWQETG 61

Query: 274 -----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                  R+ HK L   +V +VM KNP  I  D  L  A  ++ 
Sbjct: 62  VTPPAYIMFLDSVIYLKNPATYERDLHKALGQ-TVGEVMSKNPIAISPDKTLKEAATIMH 120

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++  L V+D   + IGI+   D++R
Sbjct: 121 DRSVHRLPVLDGTDQVIGILTRGDIIR 147


>gi|327311265|ref|YP_004338162.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947744|gb|AEA12850.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 291

 Score = 52.8 bits (125), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI- 296
           PL   I +LS++R+  + VVDE  +  G++    +     +    + V DVMI NP VI 
Sbjct: 183 PLDKYIDVLSKRRYRGIPVVDEQGRPVGLLMSSRVVEALARCAGNIKVGDVMILNPPVIN 242

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D +  V   +L  +NI  L+VVDD  K +GIV   D+L
Sbjct: 243 ASDDIYDVIGAML-ANNIGRLLVVDDEGKLVGIVTRTDIL 281


>gi|323343305|ref|ZP_08083532.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
           33269]
 gi|323095124|gb|EFZ37698.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
           33269]
          Length = 511

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ I+S+   G + VVDE   L GI+T  D+   F + L+   ++DVM + 
Sbjct: 122 IRRGSTVKDALGIMSDYHIGGIPVVDEDNHLVGIVTNRDL--RFERRLDK-KIDDVMTRE 178

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 179 NLVTTHQQTDLIAAAQILQKNKIEKLPVVDGNNRLVGLITYKDITK 224


>gi|325285030|ref|YP_004260820.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
           7489]
 gi|324320484|gb|ADY27949.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
           7489]
          Length = 490

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+ +     E    VLH    +         V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAMAQ-----EGGIGVLHKNMTIAEQAAKVRKVKRAESGMIIDP 101

Query: 235 IGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VDE  KL GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPLNSVVRDAKANMKEYSIGGIPIVDEEGKLIGIVTNRDL--RFEKN-NDRPISEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            KN   + E T L  A  +L+++ I  L VVD+  K +G++ F D+ + 
Sbjct: 159 SKNLVTVSEGTSLAQAEDILQENKIEKLPVVDEDNKLVGLITFRDITKL 207


>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
           DSM 18170]
 gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
           DSM 18170]
          Length = 491

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D++   +++VM K 
Sbjct: 104 IKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDL--RFERDMSK-HIDEVMTKE 160

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N       T +  A ++L+++ I  L VVD+  K IG++ + D+ +
Sbjct: 161 NIVTTAPGTDMETASEILQRNKIEKLPVVDENGKLIGLITYKDITK 206


>gi|254167690|ref|ZP_04874541.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289596908|ref|YP_003483604.1| CBS domain containing membrane protein [Aciduliprofundum boonei
           T469]
 gi|197623499|gb|EDY36063.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289534695|gb|ADD09042.1| CBS domain containing membrane protein [Aciduliprofundum boonei
           T469]
          Length = 380

 Score = 52.8 bits (125), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 3/106 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDV 288
           P++     + DA+ ++ +  +  + +V E  KL GII+  DI +     KD+  + VEDV
Sbjct: 78  PVLDPDASIEDAVKLMIDAGYRSLPIV-EKNKLVGIISRTDIIKLVPKMKDVANIPVEDV 136

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   P+++ ED+ +  A+ ++++     + VVD+ +K +GIVH  D
Sbjct: 137 MTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMRD 182


>gi|289451124|gb|ADC94039.1| KdsD [Leptospira interrogans serovar Grippotyphosa]
          Length = 125

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDL 280
           M   DS P++K    L +A+  + +   G   +VDE  KL G++T+GDI R      K  
Sbjct: 1   MLKPDSFPVLKETIILKEALETMGKFNLGIACIVDEDSKLLGLVTDGDIRRKLLKVQKPF 60

Query: 281 NTLSVEDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           + L V+D +   IK+P  I  D  L   + L+   ++  L VVD   + IG++H 
Sbjct: 61  SALFVDDALEHCIKSPVCISADAKLIDGVNLMGAKHVWDLPVVDSNHRLIGLLHL 115


>gi|126663581|ref|ZP_01734578.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteria
           bacterium BAL38]
 gi|126624529|gb|EAZ95220.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteria
           bacterium BAL38]
          Length = 490

 Score = 52.4 bits (124), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 85/200 (42%), Gaps = 26/200 (13%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  ++             P  SA M      ++AIA+ +     E  
Sbjct: 16  DDVLLIPNYSEILPREVSIQSKFSRNITLNVPIVSAAMDTVTESSMAIAMAQ-----EGG 70

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI----DAITILSEKRFGCVAVVDE 259
             VLH    +         V  +   + +  +  PL     DA   + E   G + VVDE
Sbjct: 71  IGVLHKNMTIEQQAAKVKKVKRAESGMIIDPVTLPLTATVGDAKMAMKEFSIGGIPVVDE 130

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLM 318
              LKGI+T  D+   F K +NT S+ +VM     V   + T L  A  +L+++ I  L 
Sbjct: 131 NGILKGIVTNRDL--RFEK-VNTRSILEVMTSEKLVTAAQGTTLQEAEGILQENKIEKLP 187

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD+  K +G++ F D+ + 
Sbjct: 188 VVDNNNKLVGLITFRDITKL 207


>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
           [Erythrobacter sp. NAP1]
 gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
           [Erythrobacter sp. NAP1]
          Length = 172

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 3/103 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           + DA+T ++EK FG + V D   ++ G++TE DIFR      +D  T  V +VM    + 
Sbjct: 24  VFDAVTQMAEKNFGSIFVTDPDNRVLGVMTERDIFRRVIGASRDPKTTPVSEVMTTEVRA 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +D  +   MQ++       L +VD+ ++ I ++   D + +
Sbjct: 84  AHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVMSQGDFVGY 126


>gi|254167105|ref|ZP_04873958.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197623961|gb|EDY36523.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 380

 Score = 52.4 bits (124), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 3/106 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDV 288
           P++     + DA+ ++ +  +  + +V E  KL GII+  DI +     KD+  + VEDV
Sbjct: 78  PVLDPDASIEDAVKLMIDAGYRSLPIV-EKNKLVGIISRTDIIKLVPKMKDVANIPVEDV 136

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   P+++ ED+ +  A+ ++++     + VVD+ +K +GIVH  D
Sbjct: 137 MTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMSD 182


>gi|167765900|ref|ZP_02437953.1| hypothetical protein CLOSS21_00391 [Clostridium sp. SS2/1]
 gi|167712398|gb|EDS22977.1| hypothetical protein CLOSS21_00391 [Clostridium sp. SS2/1]
          Length = 184

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 10/155 (6%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K+ A   ++ +TG G+SG      A+ L   G  ++ +      H   G     DL+I+ 
Sbjct: 31  KLIAPDKKIFLTGKGRSGLAAKGFANRLMHLGFQAYVIGEISTPHTKAG-----DLLIIT 85

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP---KEPESCPHGLAP 175
           S SG +D L +I   A+   + L  +T   +S +   AD ++ LP   K      H + P
Sbjct: 86  SGSGETDALVSIAKKAKESGLYLGLVTMNPQSTLGKMADGMIILPGDSKGNNEEKHSIQP 145

Query: 176 TTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             S   Q++  I DA+ + L+E+ N +    ++ H
Sbjct: 146 MGSQFEQMSFLIFDAIVLKLMENWNQTSEQMFMRH 180


>gi|117923874|ref|YP_864491.1| nucleotidyl transferase [Magnetococcus sp. MC-1]
 gi|117607630|gb|ABK43085.1| Nucleotidyl transferase [Magnetococcus sp. MC-1]
          Length = 351

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV 295
            PL+ A+ I+SE   G   VVD   KL G++T+GD+ R   + ++  + V +VM   P V
Sbjct: 15  APLMRALEIISEGALGVALVVDADDKLLGLVTDGDVRRGLLRHISLDVPVREVMCTTPTV 74

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +       M L+R   +  + VVDD  + +G+    D+
Sbjct: 75  ARDSDTQEHIMTLMRTRTLHHIPVVDDQGRVVGLEWLKDM 114


>gi|289192335|ref|YP_003458276.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938785|gb|ADC69540.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 298

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/123 (32%), Positives = 66/123 (53%), Gaps = 16/123 (13%)

Query: 229 SIPLVKIG-------------CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           SIP VK+G               L +   + +EK      VVD G  L GII+  DI +N
Sbjct: 166 SIPNVKVGDVGIKEVYTINPNSTLKETAKLFAEKYISGAPVVDNGS-LVGIISLHDIAKN 224

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +++N  SV+DVM K+   I +D  +  A++++ ++N+  L++VDD  K +GI+   D+
Sbjct: 225 I-ENINK-SVKDVMRKDVLTIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDI 282

Query: 336 LRF 338
           L+ 
Sbjct: 283 LKI 285


>gi|313204351|ref|YP_004043008.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
           propionicigenes WB4]
 gi|312443667|gb|ADQ80023.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
           propionicigenes WB4]
          Length = 492

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           ++ G  + DA+ +++E + G + VVDE   L GI+T  D+   F +D++   V+ +M K 
Sbjct: 104 IRKGATVGDALALMAEYKIGGIPVVDEQGYLVGIVTNRDL--RFQRDMDK-EVDAIMTKE 160

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N       T L  A  +L+Q  I  L VVD+  K +G++ + D+ +
Sbjct: 161 NLITTTRSTDLEAAADILQQFKIEKLPVVDENNKLVGLLTYKDITK 206


>gi|302345885|ref|YP_003814238.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           ATCC 25845]
 gi|302150253|gb|ADK96515.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           ATCC 25845]
          Length = 494

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 5/111 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           D + ++K G  + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++D
Sbjct: 101 DPVTILK-GRTVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDL--RFERHLDKL-IDD 156

Query: 288 VMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K+  V   + T LT A  +L+++ I  L VVD   + +G++ + D+ +
Sbjct: 157 VMTKDNLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDITK 207


>gi|169841235|ref|ZP_02874348.1| hypothetical protein cdivTM_29048 [candidate division TM7
           single-cell isolate TM7a]
          Length = 56

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/50 (50%), Positives = 39/50 (78%), Gaps = 1/50 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           +V+ITG+ +  +   K+A+TLASTGT + F++AAEA HGDLGM++  D++
Sbjct: 8   KVIITGL-EIWNNWEKIAATLASTGTTAVFINAAEALHGDLGMVSNGDVV 56


>gi|319644876|ref|ZP_07999109.1| HxlB protein [Bacillus sp. BT1B_CT2]
 gi|317392685|gb|EFV73479.1| HxlB protein [Bacillus sp. BT1B_CT2]
          Length = 185

 Score = 52.0 bits (123), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V +TG G+SG +G   A  L   G  +F               T +DL+IV + SG ++
Sbjct: 38  KVFVTGAGRSGLMGKSFAMRLMHLGINAFVTGETVTP-----AFTENDLLIVGTGSGKTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIM 181
            L  +   A+     + A+T+ + S +A  AD++L LP  P+    G    + P  S   
Sbjct: 93  SLLHMAEKAKDIGGTVAAVTTSSDSPIAEIADLILQLPGSPKDQTTGSKQTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L I DA+ + ++E +  + ++ Y  H
Sbjct: 153 QTLLLIYDAIILRIMEIKGLNTHNMYANH 181


>gi|124009745|ref|ZP_01694415.1| transaldolase [Microscilla marina ATCC 23134]
 gi|123984250|gb|EAY24599.1| transaldolase [Microscilla marina ATCC 23134]
          Length = 344

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 79/154 (51%), Gaps = 13/154 (8%)

Query: 194 LESRNFSE--NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L S NF+    D +V H   +L T  V   DVM   D  P+VK    + DA++ ++E   
Sbjct: 197 LTSNNFTTVGTDQFVEHT--RLMTENV--KDVMQ--DFNPVVKDDETIFDALSKMTESGL 250

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           G V++V+   +LKGI T+GD+ RN  +     L+    + V   NP  I ++  L  A+ 
Sbjct: 251 GAVSIVNGTGELKGIFTDGDLRRNLKEKGKAFLDNKMADCVSSANPITITQEARLYDAVA 310

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L ++  I  ++V+ +  K +G++   D ++  ++
Sbjct: 311 LFKEKEIDTIIVMAN-NKPVGMLDIQDFVKQNLV 343


>gi|311745457|ref|ZP_07719242.1| inosine-5'-monophosphate dehydrogenase [Algoriphagus sp. PR1]
 gi|126578009|gb|EAZ82229.1| inosine-5'-monophosphate dehydrogenase [Algoriphagus sp. PR1]
          Length = 492

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA +I+ E   G + VVDE + LKGIIT  D+   F KD N    E + I N        
Sbjct: 112 DAESIMREFHIGGIPVVDENRTLKGIITNRDL--RFIKDQNRPIREIMTIDNLITAKSGV 169

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A ++L+++ I  L +VD+  K  G++ + D+L+
Sbjct: 170 SLEQAEEILQEYKIEKLPIVDEDNKLTGLITYKDILK 206


>gi|284036113|ref|YP_003386043.1| inosine-5'-monophosphate dehydrogenase [Spirosoma linguale DSM 74]
 gi|283815406|gb|ADB37244.1| inosine-5'-monophosphate dehydrogenase [Spirosoma linguale DSM 74]
          Length = 490

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 85/204 (41%), Gaps = 28/204 (13%)

Query: 153 ACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLESRNF 199
           A   D VL LP   E  P                 P  SA M      ALAIA+ +    
Sbjct: 12  ALTYDDVLLLPAYSEVLPRDTQTVAQLTRNIRLNVPLISAAMDTVTESALAIAMAQ---- 67

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG-----DSIPLVKIGCPLIDAITILSEKRFGCV 254
            E    ++H    +         V  S      D I L++    L DA  I+ E + G +
Sbjct: 68  -EGGIGIIHKNMSIEAQADQVRKVKRSESGMIIDPITLLETAT-LGDAHKIMREFKIGGI 125

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHN 313
            V+DE  KL GI+T  D+   F  D+ T  V  VM  KN     E   L  A  +L+QH 
Sbjct: 126 PVIDESGKLVGILTNRDL--RFQHDM-TKPVTAVMTQKNLITAREGLTLEEAETILQQHR 182

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +V+D  + +G++ + D+L+
Sbjct: 183 IEKLPIVNDTYQLVGLITYKDILK 206


>gi|134115681|ref|XP_773554.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256180|gb|EAL18907.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 831

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V  G  + DA  + + KR  CV VVDE + L GI T  D+ FR   +  D  + SV  +M
Sbjct: 221 VPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIM 280

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP V  + T  T A+QL+       L V   C +   +V  LD+ +
Sbjct: 281 TKNPMVTRDTTNATEALQLMVSRGFRHLPV---CNEDGDVVGLLDITK 325


>gi|58261288|ref|XP_568054.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57230136|gb|AAW46537.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 831

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V  G  + DA  + + KR  CV VVDE + L GI T  D+ FR   +  D  + SV  +M
Sbjct: 221 VPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIM 280

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP V  + T  T A+QL+       L V   C +   +V  LD+ +
Sbjct: 281 TKNPMVTRDTTNATEALQLMVSRGFRHLPV---CNEDGDVVGLLDITK 325


>gi|313676463|ref|YP_004054459.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
           4126]
 gi|312943161|gb|ADR22351.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
           4126]
          Length = 490

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ I+ E + G + VVD  +KL GI+T  D+   F KD   +SVE VM     +  E+ 
Sbjct: 112 DALKIMRENKIGGIPVVDSNKKLVGIVTNRDL--RFQKD-GKVSVEKVMTSGKLITAEEG 168

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L  A  +L++H I  L +++     +G++ + D+L+
Sbjct: 169 INLEGAEGVLQEHKIEKLPIINKSGILMGLITYKDILK 206


>gi|313125589|ref|YP_004035853.1| transcriptional regulator, contains c-terminal cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312291954|gb|ADQ66414.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
          Length = 380

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           EG+KL GIIT  DI      +L+ +SVED++ K+   I E + +  A+  LR++ IS L 
Sbjct: 98  EGEKLYGIITGNDILEAVLDNLDAISVEDILTKDVVTIGEKSHVGQAINRLRENGISRLP 157

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V D+  K  G++   D++ F +
Sbjct: 158 VTDEDGKLTGVLTTHDIIEFSV 179


>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
 gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
           melanesiensis BI429]
          Length = 147

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 23/117 (19%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL------ 283
           + ILS +    V VV+E  K+ G I+E DI R             +F  DLN        
Sbjct: 24  LKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPSYFSLLQTASFIPDLNQFVRSLKK 83

Query: 284 ----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               SV ++M K   VI EDT L  A  L+ +H++ +L VVDD ++ +G++  + +L
Sbjct: 84  ISNKSVSEIMTKPAIVIKEDTPLLHAADLMIRHSLKILPVVDDGERLVGVITRMRIL 140


>gi|289618931|emb|CBI54536.1| unnamed protein product [Sordaria macrospora]
          Length = 681

 Score = 51.6 bits (122), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     L  NT+++ ++M
Sbjct: 106 IKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKSNTVTIAEIM 165

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 166 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 206


>gi|294619824|ref|ZP_06699213.1| putative transcriptional regulator [Enterococcus faecium E1679]
 gi|291593921|gb|EFF25406.1| putative transcriptional regulator [Enterococcus faecium E1679]
          Length = 251

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 6/176 (3%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIKGRVVI 69
           +G+S MK S  Q  ++S+I     ++ L+  +           F   +E++KA K  VV 
Sbjct: 61  RGYSEMKYSLEQSIVQSVIPPTDLIALLKDEINRTFQLADQTNFQPILEQLKAAKTVVVY 120

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
                  +      + L  +G P+  +            +T+DD +IV S SG +  +K+
Sbjct: 121 ATGFTQNNFSKDFVNDLILSGRPAMLISGETNFEMLSHTLTKDDFVIVTSLSGETPSIKS 180

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +       IPL  +T   K+ ++ H+D +L    E    P  L   + +++ L I
Sbjct: 181 TIKNLNMNRIPLCGVTELGKNFLSEHSDFLLYY--ETRELPSNLIEGSRSMIGLNI 234


>gi|288803876|ref|ZP_06409301.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           D18]
 gi|288333641|gb|EFC72091.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           D18]
          Length = 494

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 63/111 (56%), Gaps = 5/111 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           D + ++K G  + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++D
Sbjct: 101 DPVTILK-GRTVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDL--RFERHLDKL-IDD 156

Query: 288 VMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K   V   + T LT A  +L+++ I  L VVD   + +G++ + D+ +
Sbjct: 157 VMTKENLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDITK 207


>gi|58261286|ref|XP_568053.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57230135|gb|AAW46536.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 704

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V  G  + DA  + + KR  CV VVDE + L GI T  D+ FR   +  D  + SV  +M
Sbjct: 94  VPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTSVAQIM 153

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP V  + T  T A+QL+       L V   C +   +V  LD+ +
Sbjct: 154 TKNPMVTRDTTNATEALQLMVSRGFRHLPV---CNEDGDVVGLLDITK 198


>gi|154151768|ref|YP_001405386.1| CBS domain-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|154000320|gb|ABS56743.1| CBS domain containing protein [Methanoregula boonei 6A8]
          Length = 313

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+DA+ I+  K+ G + +VD+   L GI+TE D+ R    + + L++EDVM  + +V   
Sbjct: 136 LLDALKIIVGKKIGGLPIVDDDGTLAGILTERDVLRMLAAEHSPLTIEDVMSSSLRVTAP 195

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+ L+   + + +     L V+ D     GI+   D++R+
Sbjct: 196 DSPLSEVTKDMTRFRFRRLPVISD-DVLFGIITATDIMRY 234



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 19/118 (16%)

Query: 239 LIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDI---------FR--------NFHKDL 280
           +I A+  +++  F  + V D G +KL+GI+T GD+         +R        N    +
Sbjct: 56  IISAVATMTDCGFRRLPVTDPGTRKLRGIVTSGDVISFMGGGDKYRLVSVRHNGNLRAAV 115

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N  SV  +M   P+ +  +  L  A++++    I  L +VDD     GI+   D+LR 
Sbjct: 116 NE-SVRTLMTPKPETLPRNARLLDALKIIVGKKIGGLPIVDDDGTLAGILTERDVLRM 172


>gi|189461625|ref|ZP_03010410.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
 gi|189431655|gb|EDV00640.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
          Length = 491

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KD+ T  +++VM K 
Sbjct: 104 IKRGSTVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDL--RFEKDM-TKRIDEVMTKE 160

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  E  T +  A ++L+++ I  L VV    K +G++ + D+ +
Sbjct: 161 NIVTTEPGTDMETASRILQENKIEKLPVVGKDGKLVGLITYKDITK 206


>gi|121702431|ref|XP_001269480.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
 gi|119397623|gb|EAW08054.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
          Length = 587

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K G  + +A  +++ KR  CV V D+ +++ GI T  D+ FR     +    ++V ++M
Sbjct: 37  IKPGTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGMGQKARDITVAEIM 96

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP     DT  T A+ L+ +     L V+D+ Q   GI   LD+ R
Sbjct: 97  TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGI---LDITR 141


>gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 482

 Score = 51.2 bits (121), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K    L DA+ I+SE R   V VVD+   L GI+T  D+   F  D  T +VE++M K 
Sbjct: 99  IKAHATLRDALAIMSEYRISGVPVVDDSNTLIGILTNRDL--RFENDY-TKNVEELMTKM 155

Query: 293 PKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P + ++  T L  A  + R + +  L VVD+  K  G++   DL
Sbjct: 156 PLITVKKGTTLDDAEAIFRTNKVEKLPVVDEDNKLSGLITIKDL 199


>gi|182625554|ref|ZP_02953325.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens D
           str. JGS1721]
 gi|177909242|gb|EDT71707.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens D
           str. JGS1721]
          Length = 484

 Score = 51.2 bits (121), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVIL- 297
           +A+ ++++ R   V V  EG KL GIIT  DI    N+ K      V +VM K+P V   
Sbjct: 108 EALDLMAQYRISGVPVTREG-KLVGIITNRDIVFETNYDK-----KVSEVMTKSPLVTAK 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E T LT A+++L+QH I  L +VDD     G++   D+ +
Sbjct: 162 EGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEK 201


>gi|18311258|ref|NP_563192.1| inositol-5-monophosphate dehydrogenase [Clostridium perfringens
           str. 13]
 gi|110800169|ref|YP_696948.1| inosine 5'-monophosphate dehydrogenase [Clostridium perfringens
           ATCC 13124]
 gi|168205104|ref|ZP_02631109.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens E
           str. JGS1987]
 gi|168211655|ref|ZP_02637280.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens B
           str. ATCC 3626]
 gi|168213185|ref|ZP_02638810.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens CPE
           str. F4969]
 gi|168216760|ref|ZP_02642385.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           NCTC 8239]
 gi|169347177|ref|ZP_02866119.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens C
           str. JGS1495]
 gi|18145941|dbj|BAB81982.1| inositol-monophosphate dehydrogenase [Clostridium perfringens str.
           13]
 gi|110674816|gb|ABG83803.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           ATCC 13124]
 gi|169296860|gb|EDS78989.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens C
           str. JGS1495]
 gi|170663361|gb|EDT16044.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens E
           str. JGS1987]
 gi|170710401|gb|EDT22583.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715217|gb|EDT27399.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens CPE
           str. F4969]
 gi|182381122|gb|EDT78601.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           NCTC 8239]
          Length = 484

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVIL- 297
           +A+ ++++ R   V V  EG KL GIIT  DI    N+ K      V +VM K+P V   
Sbjct: 108 EALDLMAQYRISGVPVTREG-KLVGIITNRDIVFETNYDK-----KVSEVMTKSPLVTAK 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E T LT A+++L+QH I  L +VDD     G++   D+ +
Sbjct: 162 EGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEK 201


>gi|255690566|ref|ZP_05414241.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
           17565]
 gi|260624027|gb|EEX46898.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
           17565]
          Length = 492

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+ T  ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDM-TKHIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 EKLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|170727179|ref|YP_001761205.1| CBS domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169812526|gb|ACA87110.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella woodyi ATCC 51908]
          Length = 615

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDV 288
           ++ I   + DA   + E R   V V+D   KL GI+T+ D+ RN         +L V   
Sbjct: 162 IIDINASVSDAAKKMREARVSSVLVID-NHKLCGILTDRDL-RNRVLAEGQDGSLPVHQA 219

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   PKV+  + L+  AM L+ +H I  L +VDD ++A+G++   D+LR
Sbjct: 220 MTTQPKVLSSNALVFEAMLLMSEHGIHHLPIVDD-ERAVGVLTSTDILR 267


>gi|120436847|ref|YP_862533.1| IMP dehydrogenase [Gramella forsetii KT0803]
 gi|117578997|emb|CAL67466.1| IMP dehydrogenase [Gramella forsetii KT0803]
          Length = 499

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 55/217 (25%), Positives = 91/217 (41%), Gaps = 26/217 (11%)

Query: 141 LIAITSENKSVV--ACHADIVLTLPKEPESCPHGLA-------------PTTSAIMQLAI 185
           LIA+T+    ++  A   D VL +P   E  P  ++             P  SA M    
Sbjct: 7   LIAMTAHESKILGEALTYDDVLLVPAYSEVLPREVSIQSKFTRNIPINVPIVSAAMDTVT 66

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI----D 241
              +AIA+       E    VLH    +    +    V  +   + +  +  P+     D
Sbjct: 67  ESRMAIAMAR-----EGGIGVLHKNMSIEQQALKVRKVKRAESGMIIDPVTLPISARVRD 121

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A   + E   G + +VDE  KL GI+T  D+   F K+LN    E +  +N   + E T 
Sbjct: 122 AKESMREHSIGGIPIVDEDGKLLGIVTNRDL--RFEKNLNRPISEVMTSENLVTVAEGTS 179

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  A  +L+++ I  L VV+   + +G++ F D+ + 
Sbjct: 180 LDEAEDILQENKIEKLPVVNKDDRLVGLITFRDITKL 216


>gi|303236778|ref|ZP_07323357.1| inosine-5'-monophosphate dehydrogenase [Prevotella disiens
           FB035-09AN]
 gi|302482946|gb|EFL45962.1| inosine-5'-monophosphate dehydrogenase [Prevotella disiens
           FB035-09AN]
          Length = 494

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 61/108 (56%), Gaps = 8/108 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMI 290
           ++ G  + DA+ +++E   G + VVD+ + L GI+T  D+   R F K     ++++VM 
Sbjct: 105 IRRGSTVRDALAMMAEYHIGGIPVVDDEKHLVGIVTNRDLRFERRFDK-----TIDEVMT 159

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +N     + T LT A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 160 HENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLVGLITYKDITK 207


>gi|269925732|ref|YP_003322355.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789392|gb|ACZ41533.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 426

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 25/149 (16%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HPG +L  + +   ++M      P+ + +  P++DAI +L  + F  + V+D  + + G+
Sbjct: 111 HPGRELRNIRI--KEIMTPN---PISINVSSPIVDAIELLYNQVFKALPVIDNEKHVLGV 165

Query: 267 ITEGDIF-------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           IT  D+                    ++ H      SV  VM K    I +D     A  
Sbjct: 166 ITSSDLVNQGILPFYLPLLDKTDVDKKDLHNKAYNSSVSSVMSKPAVTINQDATAQEAAN 225

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+    I  L VVDD  K +GIV  +D+L
Sbjct: 226 LMASKKIKRLPVVDDQDKLVGIVSRVDIL 254



 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 27/135 (20%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--------- 271
           SD+MH+   +P V +G P++D +  L E     + VVDE  K+KGII   D         
Sbjct: 280 SDIMHT--QVPTVDLGAPILDVVKGLLESPIHRLIVVDEQNKVKGIIGSSDLMNAVSSHN 337

Query: 272 -----------IFRNFH-----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                      I R+       + +   + ED+M +    I  D  ++ A +L+ +    
Sbjct: 338 RAGIMEILRAQILRDERSMEHIRKIRARTAEDIMNREVVCISADADISSAAELMVKQRKK 397

Query: 316 VLMVVDDCQKAIGIV 330
           +L VVDD  K +G++
Sbjct: 398 ILPVVDDSGKLVGVI 412


>gi|83716476|ref|YP_439591.1| HPP family protein [Burkholderia thailandensis E264]
 gi|83650301|gb|ABC34365.1| HPP family protein [Burkholderia thailandensis E264]
          Length = 416

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VV
Sbjct: 249 EDLESLLRETEL-RAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVV 307

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 308 DANARVVGIVTRADL 322


>gi|88601455|ref|YP_501633.1| hypothetical protein Mhun_0138 [Methanospirillum hungatei JF-1]
 gi|88186917|gb|ABD39914.1| protein of unknown function DUF39 [Methanospirillum hungatei JF-1]
          Length = 503

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + V++E  +L G++T  DI +   +    + V+DVM +N    L D  + +A Q +  H 
Sbjct: 411 LPVLNEQGRLTGVVTTFDIAKAVARPERKVKVQDVMTRNVITTLADEPIDIAAQKMEHHR 470

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           IS L VVD   + I I+H  DL
Sbjct: 471 ISALPVVDAQNQCIAILHASDL 492


>gi|20095036|ref|NP_614883.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
 gi|19888306|gb|AAM02813.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
          Length = 502

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 1/95 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DT 300
           A+ ++ +   G + VVDE  K+ GIIT  D+     +++  L V+ VM + P VI E + 
Sbjct: 116 AVELMEKHDVGGLPVVDEEGKVVGIITRRDVGLLSEEEIGELDVKSVMTEEPVVIEEGED 175

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L   A++++R+  I  + VVDD  + +GIV   D+
Sbjct: 176 LEERALRVMREEKIERVPVVDDEGRLLGIVTAKDV 210


>gi|167616147|ref|ZP_02384782.1| HPP family protein [Burkholderia thailandensis Bt4]
 gi|257142727|ref|ZP_05590989.1| HPP family protein [Burkholderia thailandensis E264]
          Length = 392

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VV
Sbjct: 225 EDLESLLRETEL-RAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVV 283

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 284 DANARVVGIVTRADL 298


>gi|258591711|emb|CBE68012.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 153

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 53/93 (56%), Gaps = 4/93 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLL 302
           + +++ GCV + +EG KL G+IT+ ++  +   +  N  T  +E++MI+NP  I  D  +
Sbjct: 27  MRDQKVGCVLIANEG-KLLGLITDRELTIQCVAEGWNPQTTRIEEIMIRNPYTIAPDFEM 85

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             A +L  Q  +    VV+D QK +GI+   D+
Sbjct: 86  AEAARLFGQRKVRRFPVVEDGQKLLGILSVADV 118


>gi|332293589|ref|YP_004432198.1| inosine-5'-monophosphate dehydrogenase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171675|gb|AEE20930.1| inosine-5'-monophosphate dehydrogenase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 490

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 73/169 (43%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+ +     E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAIAQ-----EGGIGVLHKNMTIEEQAIKVRKVKRAESGMIIDP 101

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VD+  KL GI+T  D+   F K+ N   V +VM 
Sbjct: 102 VTLPLESNVGDAKAAMKEHSIGGIPIVDDAGKLIGIVTNRDL--RFEKN-NDRPVSEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N     E T L  A ++L+ H I  L VV D    IG++ F D+ + 
Sbjct: 159 SENLVTAAEGTSLQQAEEILQNHKIEKLPVVTDSNTLIGLITFRDITKL 207


>gi|167578020|ref|ZP_02370894.1| HPP family protein [Burkholderia thailandensis TXDOH]
          Length = 392

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VV
Sbjct: 225 EDLESLLRETEL-RAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVV 283

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 284 DANARVVGIVTRADL 298


>gi|157374890|ref|YP_001473490.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
 gi|157317264|gb|ABV36362.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
          Length = 615

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 5/116 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN- 281
           + SGD + ++ +   + DA   +   R   V V+D   KL GI+T+ D+  R   + L  
Sbjct: 155 LMSGDPL-VIDVNATVSDAARKMRSTRVSSVLVID-NNKLSGILTDRDLRNRVLAEGLEG 212

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L V   M   PK +  ++L+  AM L+ +H+I  L +VDD ++A+G++   D+LR
Sbjct: 213 SLPVHQAMTTKPKTLTSNSLVFEAMLLMSEHSIHHLPIVDD-ERAVGVLTSTDILR 267


>gi|164422735|ref|XP_001727992.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
           OR74A]
 gi|157069798|gb|EDO64901.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
           OR74A]
          Length = 610

 Score = 50.8 bits (120), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     L  NT+++ ++M
Sbjct: 37  IKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGGLKANTVTIAEIM 96

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 97  TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 137


>gi|89890444|ref|ZP_01201954.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           BBFL7]
 gi|89517359|gb|EAS20016.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           BBFL7]
          Length = 491

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA   + E   G + +VD+   +KGI+T  D+   F KD N  SV DVM  +N       
Sbjct: 112 DAKASMREHSIGGIPIVDDEGFIKGIVTNRDL--RFEKD-NNRSVTDVMTSENLITAKAG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T L  A  +L+++ I  L+VVDD  K +G++ F D+ + 
Sbjct: 169 TSLHDAEAILQEYKIEKLLVVDDQDKLVGLITFRDITKL 207


>gi|304382091|ref|ZP_07364602.1| inosine-5'-monophosphate dehydrogenase [Prevotella marshii DSM
           16973]
 gi|304336689|gb|EFM02914.1| inosine-5'-monophosphate dehydrogenase [Prevotella marshii DSM
           16973]
          Length = 494

 Score = 50.4 bits (119), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 57/108 (52%), Gaps = 8/108 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMI 290
           ++ G  + DA+ +++E   G + VVDE   L GI+T  D+   R F K      +++VM 
Sbjct: 105 IRCGSTVQDALNLMAEYHIGGIPVVDETGHLAGIVTNRDLRFERRFDK-----KIDEVMT 159

Query: 291 KNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K   V     T L  A Q+L+++ I  L V+D   + +G++ + D+ +
Sbjct: 160 KENLVTTNIQTDLAAAAQILQENKIEKLPVIDKDNRLVGLITYKDITK 207


>gi|309792464|ref|ZP_07686928.1| CBS domain containing membrane protein [Oscillochloris trichoides
           DG6]
 gi|308225452|gb|EFO79216.1| CBS domain containing membrane protein [Oscillochloris trichoides
           DG6]
          Length = 137

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 12/115 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FR-------NFHKDL 280
           + +  PL DA+ ++ E     + VV +  +L+G+IT+GDI      R       +  + L
Sbjct: 8   INLAAPLSDALAMMREHDVRRLPVVIDTGELRGMITQGDIRGADIMRVAGLDPLDIAQAL 67

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + V +VM  NP  I  +T L  A  L+ ++ I  L VVDD  + IGI+   DL
Sbjct: 68  RQVKVYEVMTTNPMAITPETGLREAALLMIENKIGGLPVVDDQNRVIGIITESDL 122


>gi|256811441|ref|YP_003128810.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
           AG86]
 gi|256794641|gb|ACV25310.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
           AG86]
          Length = 496

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 13/102 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-----VEDVMIKNPKV 295
           DAI I+       + VVD  +KL GIIT        H+D+  +      VEDVM K+   
Sbjct: 111 DAINIMENYSISGLPVVDNEEKLVGIIT--------HRDVKAIEDKSKKVEDVMTKDVVC 162

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ED     A++L+  + +  L +VDD ++ IGI+   D+L+
Sbjct: 163 AKEDIKEEEALELMYANRVERLPIVDDEKRLIGIITLRDILK 204


>gi|268323738|emb|CBH37326.1| conserved hypothetical protein, CBS domain containing [uncultured
           archaeon]
          Length = 396

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P IDAI  L++       +VD+  +L GI T+ DI +   K   L    V  VM ++P 
Sbjct: 78  TPCIDAICALTDSGQRAAPIVDDNGELVGITTDYDIMKEGSKSQILKDTKVTKVMTRSPA 137

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +   +  A  ++R++NI  ++VVD+ +  +GIV   D+L+
Sbjct: 138 YVEQGESIGKARSIIRKNNIGRVLVVDENEDLVGIVTGGDILK 180



 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 21/60 (35%), Positives = 34/60 (56%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G  +  A +I+ +   G V VVDE + L GI+T GDI +  +K    ++V +V  +N
Sbjct: 139 VEQGESIGKARSIIRKNNIGRVLVVDENEDLVGIVTGGDILKRIYKPKRKMTVGEVKGEN 198


>gi|110802266|ref|YP_699537.1| inosine 5'-monophosphate dehydrogenase [Clostridium perfringens
           SM101]
 gi|110682767|gb|ABG86137.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           SM101]
          Length = 484

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVIL- 297
           +A+ ++++ R   V V  EG KL GIIT  DI    N+ K      V +VM K+P V   
Sbjct: 108 EALDLMAQYRISGVPVTREG-KLVGIITNRDIVFETNYDK-----KVSEVMTKSPLVTAK 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E T LT A+++L+QH I  L ++DD     G++   D+ +
Sbjct: 162 EGTTLTEALEILKQHKIEKLPLIDDENNLKGLITIKDIEK 201


>gi|152994733|ref|YP_001339568.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150835657|gb|ABR69633.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Marinomonas sp. MWYL1]
          Length = 625

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 5/95 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++E R   + VV E +KL GI+T+ D+           ++L V+DVM ++P  +  D L+
Sbjct: 180 MTEARVSSILVV-EDKKLSGIVTDRDLRSRILALGGSADSL-VKDVMTRDPVSLRPDALV 237

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A  L+ + NI  L +VD+ Q+A+G++   DLLR
Sbjct: 238 MQAQTLMSESNIHHLPIVDEEQRAVGMLTAADLLR 272


>gi|163755256|ref|ZP_02162376.1| putative inosine-5'-monophosphate dehydrogenase [Kordia algicida
           OT-1]
 gi|161324676|gb|EDP96005.1| putative inosine-5'-monophosphate dehydrogenase [Kordia algicida
           OT-1]
          Length = 491

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/165 (27%), Positives = 74/165 (44%), Gaps = 7/165 (4%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           P  SA M      A+AIA+           +  +     K+  +    S ++    ++PL
Sbjct: 47  PIISAAMDTVTESAMAIAMAREGGIGVLHKNMTIERQAQKVRKVKRAESGMIIDPVTLPL 106

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
             I   + DA   + E   G + +VDE  KLKGI+T  D+   F  +     VE +  +N
Sbjct: 107 TAI---VADAKANMKEHSIGGIPIVDENGKLKGIVTNRDL--RFEHNNQRPIVEVMTSEN 161

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                E T L  A  +L+++ I  L++VDD  K  G++ F D+ +
Sbjct: 162 LVTSSEGTSLKDAEAILQKNKIEKLLIVDDNYKLKGLITFRDITK 206


>gi|296110304|ref|YP_003620685.1| KpsF/GutQ [Leuconostoc kimchii IMSNU 11154]
 gi|295831835|gb|ADG39716.1| KpsF/GutQ [Leuconostoc kimchii IMSNU 11154]
          Length = 81

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 34/55 (61%)

Query: 44 SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
          S++  L   F   VE I A KGR +  GIGKSG I  K+A++L+S G  SFF+ A
Sbjct: 21 SVRETLDEHFDAVVETILANKGRTIFIGIGKSGIIAEKIAASLSSVGVSSFFIDA 75


>gi|119872079|ref|YP_930086.1| signal transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673487|gb|ABL87743.1| putative signal transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 286

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           EKR+  + VVDE  K  G++    +            V+DVM+K+P  I ED  +  A++
Sbjct: 188 EKRYRGIPVVDENGKPIGLLMASKLMETLSLCKLDAKVKDVMVKDPPTIYEDEDIHEAIR 247

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+    I  L+VVD   + +GI+   D+LR
Sbjct: 248 LMVAGGIGRLLVVDSEDRLVGIITRTDILR 277


>gi|256617010|ref|ZP_05473856.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256956711|ref|ZP_05560882.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|256961272|ref|ZP_05565443.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|257081988|ref|ZP_05576349.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis E1Sol]
 gi|257084540|ref|ZP_05578901.1| RpiR family phosphosugar-binding transcriptional protein
           [Enterococcus faecalis Fly1]
 gi|257087464|ref|ZP_05581825.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|257090623|ref|ZP_05584984.1| predicted protein [Enterococcus faecalis CH188]
 gi|257421925|ref|ZP_05598915.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|256596537|gb|EEU15713.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256947207|gb|EEU63839.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|256951768|gb|EEU68400.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|256990018|gb|EEU77320.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis E1Sol]
 gi|256992570|gb|EEU79872.1| RpiR family phosphosugar-binding transcriptional protein
           [Enterococcus faecalis Fly1]
 gi|256995494|gb|EEU82796.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|256999435|gb|EEU85955.1| predicted protein [Enterococcus faecalis CH188]
 gi|257163749|gb|EEU93709.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
          Length = 284

 Score = 50.4 bits (119), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 135 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 195 ASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 253

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 254 DVLFFAYA-AKNYKE 267


>gi|224539228|ref|ZP_03679767.1| hypothetical protein BACCELL_04130 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519151|gb|EEF88256.1| hypothetical protein BACCELL_04130 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 376

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 58/113 (51%), Gaps = 1/113 (0%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           S +G+ S +  CA+ K      R+V TG+G S  I    A+ ++S   P+  ++A E  H
Sbjct: 50  SEEGKKSLKTVCALWK-SGEYDRIVFTGMGSSYFISQAAATMISSASIPASAINAGELLH 108

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                +T   L+I +S SG S E+  +L   R   I +I IT+E+ S +A  A
Sbjct: 109 FQSPSLTERTLLIAVSQSGESYEVIELLKKQRWLPITVIGITNESGSSLAVMA 161


>gi|116491965|ref|YP_803700.1| RpiR family transcriptional regulator [Pediococcus pentosaceus ATCC
           25745]
 gi|116102115|gb|ABJ67258.1| transcriptional regulator, RpiR family [Pediococcus pentosaceus
           ATCC 25745]
          Length = 270

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 55/97 (56%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G+G SG+   +L+  L   G  +F    +   +    ++ +DDL+IVLS SG S+
Sbjct: 122 RVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISSSIMQKDDLLIVLSVSGKSN 181

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           E+   +  A++  + +++IT+ + S +A  +D  L++
Sbjct: 182 EVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQLSV 218


>gi|321255198|ref|XP_003193342.1| hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
 gi|317459812|gb|ADV21555.1| Hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
          Length = 803

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVM 289
           V  G  + DA  + + KR  CV VVDE + L GI T  D+ FR   + L+  S  V  +M
Sbjct: 193 VPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTNVAQIM 252

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP V  + T  T A+QL+       L V   C +   +V  LD+ +
Sbjct: 253 TKNPMVTRDTTNATEALQLMVSRGFRHLPV---CNEDGDVVGLLDITK 297


>gi|291485366|dbj|BAI86441.1| hypothetical protein BSNT_04276 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 442

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK F    G   VVD+  K+ GI+T  DI  +   D N  S+E VM KNP  +
Sbjct: 211 DKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSKDIAGH---DRNA-SIEKVMTKNPVTV 266

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL V D  QK IG++   D+L+
Sbjct: 267 IGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQDVLK 307


>gi|227519849|ref|ZP_03949898.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX0104]
 gi|229545146|ref|ZP_04433871.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX1322]
 gi|293383557|ref|ZP_06629467.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|293387330|ref|ZP_06631886.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|300861165|ref|ZP_07107252.1| transcriptional regulator, RpiR family [Enterococcus faecalis TUSoD
           Ef11]
 gi|307277132|ref|ZP_07558236.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|307287687|ref|ZP_07567730.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|312899864|ref|ZP_07759182.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0470]
 gi|312906107|ref|ZP_07765119.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           512]
 gi|312909453|ref|ZP_07768308.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           516]
 gi|227072643|gb|EEI10606.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX0104]
 gi|229309691|gb|EEN75678.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX1322]
 gi|291079069|gb|EFE16433.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|291083228|gb|EFE20191.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|300850204|gb|EFK77954.1| transcriptional regulator, RpiR family [Enterococcus faecalis TUSoD
           Ef11]
 gi|306501425|gb|EFM70728.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|306506062|gb|EFM75228.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|310627753|gb|EFQ11036.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           512]
 gi|311290126|gb|EFQ68682.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           516]
 gi|311292860|gb|EFQ71416.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0470]
 gi|315025379|gb|EFT37311.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2137]
 gi|315032927|gb|EFT44859.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0017]
 gi|315035589|gb|EFT47521.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0027]
 gi|315144782|gb|EFT88798.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2141]
 gi|315150128|gb|EFT94144.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0012]
 gi|315155367|gb|EFT99383.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0043]
 gi|315164856|gb|EFU08873.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1302]
 gi|315579077|gb|EFU91268.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0630]
 gi|327535718|gb|AEA94552.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis OG1RF]
          Length = 282

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|315173697|gb|EFU17714.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1346]
          Length = 282

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
 gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
          Length = 144

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 7/107 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           L +   +LSEKR G + +V++  +L GI++E DI R       D+ T  V++ M   PKV
Sbjct: 23  LAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARGPDVLTQLVKEAM--TPKV 80

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   ED  +  AM+L+ +     L VVD+ ++ +G V   D+++  I
Sbjct: 81  VTVREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGDVVKRKI 127


>gi|312905156|ref|ZP_07764277.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
 gi|310631546|gb|EFQ14829.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
          Length = 282

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|15899929|ref|NP_344534.1| hypothetical protein SSO3230 [Sulfolobus solfataricus P2]
 gi|13816671|gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
          Length = 156

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLL 302
           I+++   G V VVD G+ + GIITE D+ R   K   L+T++ E++M  +   I ED+ +
Sbjct: 56  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGKSLDTIA-EEIMTASLITIKEDSPI 113

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 114 TGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIAR 148


>gi|295703027|ref|YP_003596102.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294800686|gb|ADF37752.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium DSM
           319]
          Length = 185

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V +TG G+SG +G   A  +   G  ++ +     S       T+DDL+I+ S SG + 
Sbjct: 38  KVFVTGAGRSGLMGKSFAMRMMHMGIDAYVIGETVTS-----TFTQDDLLIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP----ESCPHGLAPTTSAIM 181
            L  I   A+     +  +T  + S +   AD ++ LP  P    +S    + P  S   
Sbjct: 93  SLIPIAQKAKELGGKVGVVTISSDSTLGKLADFIVKLPGAPKDQEQSSYQTVQPMASLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DAL +  +E +    +  Y  H
Sbjct: 153 QTLLLFYDALILRFMEKKELDTHTMYGKH 181


>gi|325520917|gb|EGC99893.1| KpsF/GutQ family protein [Burkholderia sp. TJI49]
          Length = 85

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 262 KLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           K+ GI T+GD+ R   +D    +LS+ +VM ++P+ I  D L   A++L+ +H I+ ++V
Sbjct: 4   KVVGIFTDGDLRRVLARDGDFRSLSIAEVMTRDPRTIAPDHLAVEAVELMERHRINQMLV 63

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD     IG ++  DL    +I
Sbjct: 64  VDADGVLIGALNMHDLFSKKVI 85


>gi|284173895|ref|ZP_06387864.1| hypothetical protein Ssol98_04450 [Sulfolobus solfataricus 98/2]
          Length = 129

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLL 302
           I+++   G V VVD G+ + GIITE D+ R   K   L+T++ E++M  +   I ED+ +
Sbjct: 29  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGKSLDTIA-EEIMTASLITIKEDSPI 86

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 87  TGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIAR 121


>gi|29349253|ref|NP_812756.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253570401|ref|ZP_04847810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_6]
 gi|298384793|ref|ZP_06994352.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_14]
 gi|29341161|gb|AAO78950.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251840782|gb|EES68864.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_6]
 gi|298261937|gb|EFI04802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_14]
          Length = 492

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 60/107 (56%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+ T  ++ VM   
Sbjct: 104 IKRGSTVSDALGIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDM-TKHIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|328465475|gb|EGF36704.1| hypothetical protein LM1816_06000 [Listeria monocytogenes 1816]
          Length = 397

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|146303024|ref|YP_001190340.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701274|gb|ABP94416.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 128

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V+ G  L     I++EK  G V + + G+ + GI+TE D+ R   KD  L+   V+D+M 
Sbjct: 16  VEKGATLRQITKIMTEKNVGSVIITENGKPI-GIVTERDVVRAIGKDHKLDD-KVDDIMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +   + ED+ +T A+ L+R +NI  L V+ +  K  GI+   D+ +
Sbjct: 74  VSLITVREDSPITGALSLMRTYNIRHLPVISEDGKLTGIISIRDVAK 120


>gi|16079979|ref|NP_390805.1| hypothetical protein BSU29270 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310870|ref|ZP_03592717.1| hypothetical protein Bsubs1_15976 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315196|ref|ZP_03597001.1| hypothetical protein BsubsN3_15877 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320113|ref|ZP_03601407.1| hypothetical protein BsubsJ_15788 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324395|ref|ZP_03605689.1| hypothetical protein BsubsS_15947 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321312463|ref|YP_004204750.1| hypothetical protein BSn5_05475 [Bacillus subtilis BSn5]
 gi|81637618|sp|O34921|YTOI_BACSU RecName: Full=Uncharacterized protein ytoI
 gi|2293258|gb|AAC00336.1| YtoI [Bacillus subtilis]
 gi|2635392|emb|CAB14887.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|320018737|gb|ADV93723.1| hypothetical protein BSn5_05475 [Bacillus subtilis BSn5]
          Length = 439

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK F    G   VVD+  K+ GI+T  DI  +   D N  S+E VM KNP  +
Sbjct: 208 DKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSKDIAGH---DRNA-SIEKVMTKNPVTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL V D  QK IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVTDGHQKLIGMISRQDVLK 304


>gi|313608800|gb|EFR84604.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes FSL F2-208]
          Length = 397

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|224499719|ref|ZP_03668068.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes Finland 1988]
          Length = 397

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|315166372|gb|EFU10389.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1341]
          Length = 282

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 2/96 (2%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+   +DIVL     
Sbjct: 172 LGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSS 230

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            E  P   A T S + QL + D L  A   ++N+ E
Sbjct: 231 GEDVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|46907656|ref|YP_014045.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47092718|ref|ZP_00230504.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217964424|ref|YP_002350102.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes HCC23]
 gi|226224029|ref|YP_002758136.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes Clip81459]
 gi|254824512|ref|ZP_05229513.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|254852529|ref|ZP_05241877.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254932613|ref|ZP_05265972.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|254992610|ref|ZP_05274800.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes FSL J2-064]
 gi|255522456|ref|ZP_05389693.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes FSL J1-175]
 gi|284801814|ref|YP_003413679.1| hypothetical protein LM5578_1569 [Listeria monocytogenes 08-5578]
 gi|284994956|ref|YP_003416724.1| hypothetical protein LM5923_1521 [Listeria monocytogenes 08-5923]
 gi|290894097|ref|ZP_06557070.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|300765570|ref|ZP_07075549.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|46880924|gb|AAT04222.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018906|gb|EAL09653.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217333694|gb|ACK39488.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes HCC23]
 gi|225876491|emb|CAS05200.1| Putative glycine betaine/carnitine/choline ABC transporter
           (ATP-binding protein) [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258605837|gb|EEW18445.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|284057376|gb|ADB68317.1| hypothetical protein LM5578_1569 [Listeria monocytogenes 08-5578]
 gi|284060423|gb|ADB71362.1| hypothetical protein LM5923_1521 [Listeria monocytogenes 08-5923]
 gi|290556352|gb|EFD89893.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293584172|gb|EFF96204.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|293593751|gb|EFG01512.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|300513671|gb|EFK40739.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|307571011|emb|CAR84190.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes L99]
 gi|328474949|gb|EGF45743.1| hypothetical protein LM220_03087 [Listeria monocytogenes 220]
 gi|332311869|gb|EGJ24964.1| Choline transport ATP-binding protein [Listeria monocytogenes str.
           Scott A]
          Length = 397

 Score = 50.1 bits (118), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|308071366|ref|YP_003872971.1| 6-phospho 3-hexuloisomerase (PHI) [Paenibacillus polymyxa E681]
 gi|305860645|gb|ADM72433.1| 6-phospho 3-hexuloisomerase (PHI) [Paenibacillus polymyxa E681]
          Length = 185

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 67/153 (43%), Gaps = 11/153 (7%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A   +V + G G+SG +   LA  L   G  ++ V   E     LG     DL+I+ S S
Sbjct: 34  AAANKVFVAGAGRSGFMIRSLAMRLMHMGVQAYVV--GETVTPGLG---EGDLLIIGSGS 88

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTT 177
           G +  L ++   A++    L  +T+   S +   ADI++ LP  P+   +     + P  
Sbjct: 89  GETKSLTSMAEKAKKLGASLALLTTSPGSTIGKMADIIVKLPGAPKDPSNKDYQTIQPMG 148

Query: 178 SAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
           S   Q  L  GDAL +  +E R  +    +  H
Sbjct: 149 SLFEQTLLLYGDALVLRTMEMRKLTSESMFGQH 181


>gi|16800535|ref|NP_470803.1| hypothetical protein lin1467 [Listeria innocua Clip11262]
 gi|16413940|emb|CAC96698.1| opuCA [Listeria innocua Clip11262]
          Length = 397

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|16803468|ref|NP_464953.1| hypothetical protein lmo1428 [Listeria monocytogenes EGD-e]
 gi|47095379|ref|ZP_00232989.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224501631|ref|ZP_03669938.1| hypothetical protein LmonFR_03782 [Listeria monocytogenes FSL
           R2-561]
 gi|254829813|ref|ZP_05234468.1| hypothetical protein Lmon1_00590 [Listeria monocytogenes 10403S]
 gi|254898406|ref|ZP_05258330.1| hypothetical protein LmonJ_01285 [Listeria monocytogenes J0161]
 gi|254936430|ref|ZP_05268127.1| opuCA [Listeria monocytogenes F6900]
 gi|9651975|gb|AAF91339.1|AF249729_1 ATPase OpuCA [Listeria monocytogenes]
 gi|16410857|emb|CAC99506.1| opuCA [Listeria monocytogenes EGD-e]
 gi|47016200|gb|EAL07123.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258609022|gb|EEW21630.1| opuCA [Listeria monocytogenes F6900]
          Length = 397

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|319647338|ref|ZP_08001560.1| YtoI protein [Bacillus sp. BT1B_CT2]
 gi|317390685|gb|EFV71490.1| YtoI protein [Bacillus sp. BT1B_CT2]
          Length = 445

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 248 EKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           EK F    G   +VDE  K+ GI+T  D+      D + L +E VM KNP  ++  T + 
Sbjct: 220 EKNFETGHGRFPIVDEQMKIHGILTSKDVA---GYDRSVL-IEKVMTKNPITVIGKTSVA 275

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A Q++    I VL VVD+ QK IG++   D+L+
Sbjct: 276 SAAQMMVWEGIEVLPVVDERQKLIGMISRQDVLK 309


>gi|254827716|ref|ZP_05232403.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|258600095|gb|EEW13420.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
          Length = 397

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRIATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|163119594|ref|YP_080221.2| hypothetical protein BL00411 [Bacillus licheniformis ATCC 14580]
 gi|145903104|gb|AAU24583.2| conserved protein YtoI [Bacillus licheniformis ATCC 14580]
          Length = 440

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 248 EKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           EK F    G   +VDE  K+ GI+T  D+      D + L +E VM KNP  ++  T + 
Sbjct: 215 EKNFETGHGRFPIVDEQMKIHGILTSKDVA---GYDRSVL-IEKVMTKNPITVIGKTSVA 270

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A Q++    I VL VVD+ QK IG++   D+L+
Sbjct: 271 SAAQMMVWEGIEVLPVVDERQKLIGMISRQDVLK 304


>gi|116872861|ref|YP_849642.1| glycine betaine/L-proline ABC transporter, ATP- binding protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741739|emb|CAK20863.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 397

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|108761293|ref|YP_632411.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108465173|gb|ABF90358.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 143

 Score = 50.1 bits (118), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 37/57 (64%), Gaps = 2/57 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           + A+D+M     +  V+   PL  A+T++ E ++GC+ VVDEG  L+GI+TE D+ R
Sbjct: 69  LWAADIMTR--DVQTVRPDTPLRRAVTLMLEHKYGCLPVVDEGGVLQGILTEADLVR 123


>gi|281423986|ref|ZP_06254899.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
 gi|281401911|gb|EFB32742.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
          Length = 494

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++ +   G + VVD+  KL GI+T  D+   F + ++   +++VM K 
Sbjct: 105 IRRGSTVKDALELMHDYHIGGIPVVDDDNKLVGIVTNRDL--RFERRMDK-KIDEVMTKE 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITK 207


>gi|227553965|ref|ZP_03984012.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis HH22]
 gi|227176951|gb|EEI57923.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis HH22]
 gi|315030187|gb|EFT42119.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4000]
 gi|315574334|gb|EFU86525.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309B]
 gi|315580191|gb|EFU92382.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309A]
          Length = 290

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 141 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 200

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 201 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 259

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 260 DVLFFAYA-AKNYKE 273


>gi|52786806|ref|YP_092635.1| YtoI [Bacillus licheniformis ATCC 14580]
 gi|52349308|gb|AAU41942.1| YtoI [Bacillus licheniformis ATCC 14580]
          Length = 443

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/94 (37%), Positives = 51/94 (54%), Gaps = 8/94 (8%)

Query: 248 EKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           EK F    G   +VDE  K+ GI+T  D+      D + L +E VM KNP  ++  T + 
Sbjct: 218 EKNFETGHGRFPIVDEQMKIHGILTSKDVA---GYDRSVL-IEKVMTKNPITVIGKTSVA 273

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A Q++    I VL VVD+ QK IG++   D+L+
Sbjct: 274 SAAQMMVWEGIEVLPVVDERQKLIGMISRQDVLK 307


>gi|315282317|ref|ZP_07870751.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria marthii FSL S4-120]
 gi|313614038|gb|EFR87748.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria marthii FSL S4-120]
          Length = 394

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/92 (40%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AITI+ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITIMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVNE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|293596538|ref|ZP_05262115.2| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|293590071|gb|EFF98405.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
          Length = 407

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 281 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 334

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 335 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 366


>gi|313618938|gb|EFR90789.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria innocua FSL S4-378]
 gi|313623785|gb|EFR93917.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria innocua FSL J1-023]
          Length = 397

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 356


>gi|256810339|ref|YP_003127708.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus fervens AG86]
 gi|256793539|gb|ACV24208.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus fervens AG86]
          Length = 177

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 8/137 (5%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           E   + +  V++I   K ++ + G+G+SG+IG   A  L   G  S+FV  A     +  
Sbjct: 22  EWKNRLNSLVDRIIKAK-KIFVFGVGRSGYIGRCFAMRLMHLGFDSYFVGEATTPSYE-- 78

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP-KEP 166
              +DDL+I++S SG ++ +  +   A + +  ++AI  E  +VV   ADI + L  K+ 
Sbjct: 79  ---KDDLLILISGSGRTESVLTVAKKAAKINNNIVAIVCECGNVVE-FADITIQLDVKKS 134

Query: 167 ESCPHGLAPTTSAIMQL 183
           +  P G     +A++ L
Sbjct: 135 KYLPMGTTFEETALIFL 151


>gi|145591936|ref|YP_001153938.1| signal transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283704|gb|ABP51286.1| putative signal transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 286

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E+RF  + VVDE  K  G++    +       +    V D+M +NP  I ED  L  A++
Sbjct: 188 ERRFRGIPVVDEQTKPVGLLMASKVMEALANCILKAKVRDLMARNPPTIHEDEDLHEAVR 247

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+    I  L+VVD   + +GIV   D+L
Sbjct: 248 LMISSGIGRLLVVDSEDRLVGIVTRTDIL 276


>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
 gi|281411541|ref|YP_003345620.1| hypothetical protein [Thermotoga naphthophila RKU-10]
 gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
 gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
           RKU-10]
          Length = 150

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 23/119 (19%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL----- 283
            I +LS +    V VVD   ++ G ++E D+ +             +F  D N L     
Sbjct: 23  VIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDTNQLIRNVV 82

Query: 284 -----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 V D M K P V+ ED  L VA   L +H    L VVD+  + +GIV  +D+LR
Sbjct: 83  KIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILR 141


>gi|307290513|ref|ZP_07570426.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
 gi|306498460|gb|EFM67964.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
          Length = 290

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 141 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 200

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 201 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 259

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 260 DVLFFAYA-AKNYKE 273


>gi|159794788|pdb|2EF7|A Chain A, Crystal Structure Of St2348, A Hypothetical Protein With
           Cbs Domains From Sulfolobus Tokodaii Strain7
 gi|159794789|pdb|2EF7|B Chain B, Crystal Structure Of St2348, A Hypothetical Protein With
           Cbs Domains From Sulfolobus Tokodaii Strain7
          Length = 133

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 51/103 (49%), Gaps = 4/103 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPK 294
             L D   + +EK  G V VVD G K  GIITE DI +   K   L T   E+    +  
Sbjct: 21  AKLNDIAKVXTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLET-KAEEFXTASLI 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I ED+ +T A+ L RQ NI  L VVDD     GI+   D+ R
Sbjct: 79  TIREDSPITGALALXRQFNIRHLPVVDDKGNLKGIISIRDITR 121


>gi|261601605|gb|ACX91208.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 132

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLL 302
           I+++   G V VVD G+ + GIITE D+ R   K   L+T++ E++M  +   I ED+ +
Sbjct: 32  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGKSLDTIA-EEIMTASLITIKEDSPI 89

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 90  TGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIAR 124


>gi|114562724|ref|YP_750237.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334017|gb|ABI71399.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
          Length = 615

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 8/103 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPK 294
           ++DA  ++ E R   V V+D  QKL GI+T+ D+ RN       D+NTL V   M  NP 
Sbjct: 169 VMDAAKLMREHRVSSVLVID-NQKLTGILTDRDL-RNRIIAEGLDVNTL-VSQAMTINPV 225

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               + L+  AM  + +HNI  L VVD   +A+G++   D+LR
Sbjct: 226 TTHANALVFEAMLAMSEHNIHHLPVVDGS-RALGMITSTDILR 267


>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
 gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
          Length = 150

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 53/119 (44%), Gaps = 23/119 (19%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL----- 283
            I +LS +    V VVD   ++ G ++E D+ +             +F  D N L     
Sbjct: 23  VIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDTNQLIRNVV 82

Query: 284 -----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 V D M K P V+ ED  L VA   L +H    L VVD+  + +GIV  +D+LR
Sbjct: 83  KIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILR 141


>gi|88607628|ref|YP_504716.1| inosine-5'-monophosphate dehydrogenase [Anaplasma phagocytophilum
           HZ]
 gi|88598691|gb|ABD44161.1| inosine-5'-monophosphate dehydrogenase [Anaplasma phagocytophilum
           HZ]
          Length = 486

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 56/101 (55%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVIL 297
           L  A++I+ +  +  + VV+E +KL GIIT  D+   F +D+N   V D+M K N   + 
Sbjct: 102 LKTALSIMQQHSYSGIPVVEENKKLVGIITNRDV--RFVEDMN-CRVCDIMTKENLVTVR 158

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E    + A +LL +H I  L+V D+    IG++   D+ +F
Sbjct: 159 EGVSQSEATRLLHKHKIERLIVTDEYGCCIGLITVKDIEKF 199


>gi|325268745|ref|ZP_08135373.1| inosine-5'-monophosphate dehydrogenase [Prevotella multiformis DSM
           16608]
 gi|324988913|gb|EGC20868.1| inosine-5'-monophosphate dehydrogenase [Prevotella multiformis DSM
           16608]
          Length = 494

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++++   G + VVD    L GI+T  D+   F + L+ L +++VM K 
Sbjct: 105 IRQGRTVKDALDMMADYHIGGIPVVDAENHLVGIVTNRDL--RFERHLDKL-IDEVMTKE 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T LT A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDITK 207


>gi|282880883|ref|ZP_06289576.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
           5C-B1]
 gi|281305265|gb|EFA97332.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
           5C-B1]
          Length = 495

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+   F + L+  ++++VM   
Sbjct: 105 IRRGSTVQDALNMMRDYHIGGIPVVDDENHLVGIVTNRDL--RFERRLDK-TIDEVMTSE 161

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V     T L+ A Q+L++H I  L VVD+  K +G++ + D+ +
Sbjct: 162 NLVTTHVKTNLSDAAQILQEHKIEKLPVVDNQNKLVGLITYKDITK 207


>gi|269120744|ref|YP_003308921.1| RpiR family transcriptional regulator [Sebaldella termitidis ATCC
           33386]
 gi|268614622|gb|ACZ08990.1| transcriptional regulator, RpiR family [Sebaldella termitidis ATCC
           33386]
          Length = 284

 Score = 49.7 bits (117), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/154 (27%), Positives = 76/154 (49%), Gaps = 10/154 (6%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
           + F   +E I A + R+V+ GIG S  + +   + LA  G  +F       +H    MI+
Sbjct: 121 YVFEEVIEAIIAAE-RIVVLGIGNSAIVSTDFVNKLARVGMNAF---TNLDTHLQFSMIS 176

Query: 111 ---RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
              ++DL+I++S SG + E+      A++    +I+IT   K+ +  ++D +L       
Sbjct: 177 NLGKNDLLILISDSGETREIIEAAKLAKQNKTRIISITKFTKNKLHAYSDFILKTA--SF 234

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                L  TTS I Q  I D + I +L++ +FS+
Sbjct: 235 DINLRLDATTSRITQFTIIDMIFINILKT-DFSK 267


>gi|282162802|ref|YP_003355187.1| hypothetical protein MCP_0132 [Methanocella paludicola SANAE]
 gi|282155116|dbj|BAI60204.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 501

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM     +  + +G  + +A   + + +F  + VVDE  +L GI+T  D+ +       
Sbjct: 382 DVMAP---VATITLGFSVHEAAKKIIQDKFNHLPVVDENSRLVGIVTSWDVSKAL----- 433

Query: 282 TLSVED----VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            LS  D    +M +N   +  D    +A++LL +HNIS L V+D  +K +GIV
Sbjct: 434 ALSKSDKLAPIMTRNVITVAPDDPADLAVRLLEKHNISALPVIDKDKKVLGIV 486


>gi|255975166|ref|ZP_05425752.1| transcriptional regulator [Enterococcus faecalis T2]
 gi|255968038|gb|EET98660.1| transcriptional regulator [Enterococcus faecalis T2]
          Length = 284

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 135 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 195 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 253

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 254 DVLFFAYA-AKNYKE 267


>gi|284054104|ref|ZP_06384314.1| signal transduction protein [Arthrospira platensis str. Paraca]
 gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 157

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 34/148 (22%)

Query: 221 SDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------ 273
           +DVM      PLV     PL DAI +L++ R G + V+D   KL G I+E DI       
Sbjct: 6   ADVMTPN---PLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSGV 62

Query: 274 ----------------------RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLR 310
                                 +  HK L   +V DVM   P + ++ D  L+ A +L+ 
Sbjct: 63  TPPAYITILDSVIYLENPSRYEKELHKALGQ-TVGDVMSNGPMITIKPDCSLSEAARLMN 121

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           Q  +  L V+D  +K IGI+   D++R 
Sbjct: 122 QKQVHRLPVLDGSKKLIGILTCGDIIRV 149



 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM  NP VI  D  LT A+ LL Q+ I  L V+D+  K +G +   D++
Sbjct: 4   TVADVMTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56


>gi|255972099|ref|ZP_05422685.1| predicted protein [Enterococcus faecalis T1]
 gi|256763126|ref|ZP_05503706.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256963600|ref|ZP_05567771.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|257419887|ref|ZP_05596881.1| predicted protein [Enterococcus faecalis T11]
 gi|255963117|gb|EET95593.1| predicted protein [Enterococcus faecalis T1]
 gi|256684377|gb|EEU24072.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256954096|gb|EEU70728.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|257161715|gb|EEU91675.1| predicted protein [Enterococcus faecalis T11]
          Length = 284

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 135 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 195 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 253

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 254 DVLFFAYA-AKNYKE 267


>gi|313633271|gb|EFS00135.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria seeligeri FSL N1-067]
          Length = 397

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD   + +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKENRLVGIV 356


>gi|289434712|ref|YP_003464584.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170956|emb|CBH27498.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 397

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD   + +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKENRLVGIV 356


>gi|320012117|gb|ADW06967.1| CBS domain containing membrane protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 224

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 54/109 (49%), Gaps = 7/109 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED--VMI 290
           V+ G    +   +LSE     V VVDEG +  G+++E D+ RN     +T    D   ++
Sbjct: 17  VQRGTTFKEIARLLSESNVTAVPVVDEGGRPVGVVSEADLLRNR----STGGARDAGALM 72

Query: 291 KNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P V  E     V A +++ +H +  L VVD   + +G++   DL+R 
Sbjct: 73  SHPAVTAEPRWNVVHAARVMEEHRVKRLPVVDAAGRLVGVLSRSDLVRV 121


>gi|257416671|ref|ZP_05593665.1| transcriptional regulator [Enterococcus faecalis AR01/DG]
 gi|257158499|gb|EEU88459.1| transcriptional regulator [Enterococcus faecalis ARO1/DG]
          Length = 284

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 135 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 195 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLK-TSSGEDVPLRSAATVSLVAQLYVV 253

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 254 DVLFFAYA-AKNYKE 267


>gi|269121808|ref|YP_003309985.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
 gi|268615686|gb|ACZ10054.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
          Length = 187

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 13/160 (8%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
            EK+    GR+ I G G+SG      A+ L   G  S+FV            I + DLI+
Sbjct: 29  AEKLIREAGRIFIAGAGRSGFAARGFANRLMHLGFHSYFVGEPTTPS-----IQKGDLIV 83

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP------KEPESCP 170
           + S SG++  L ++   A+     L+ +T   ++ +   AD+++ +P         +  P
Sbjct: 84  IGSGSGNTASLVSMAKKAKSQGAKLVTLTIFPENTIGSFADVIIQIPGVTSKADNEQEEP 143

Query: 171 HGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + P  ++  QL+  I D++ I L      +E   +  H
Sbjct: 144 DSIQPKGNSFEQLSWLIYDSMIIDLKRETGQTEEQMFARH 183


>gi|29376928|ref|NP_816082.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis V583]
 gi|229549395|ref|ZP_04438120.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis ATCC 29200]
 gi|256853794|ref|ZP_05559159.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|307271540|ref|ZP_07552812.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|29344393|gb|AAO82152.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis V583]
 gi|229305632|gb|EEN71628.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis ATCC 29200]
 gi|256710737|gb|EEU25780.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|306511812|gb|EFM80810.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|315146709|gb|EFT90725.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4244]
 gi|315159057|gb|EFU03074.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0312]
 gi|315170268|gb|EFU14285.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1342]
          Length = 282

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|307285784|ref|ZP_07565918.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
 gi|306502545|gb|EFM71812.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
          Length = 282

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|256810055|ref|YP_003127424.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793255|gb|ACV23924.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 418

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P+IDA+  + E       +V++  KL GI+T+ DI     K   +    V  +M +N  
Sbjct: 82  TPVIDAVCEMLESGQRAAPIVNDEGKLVGIVTDYDIMARAAKSKIMKDTKVTKIMTRNVI 141

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I E+  +  A  L+R +NI  L+VVDD    IG+V  +D+L+
Sbjct: 142 TINENDSIGKARALMRDNNIGRLVVVDDEGNPIGMVTEVDILK 184


>gi|324997327|ref|ZP_08118439.1| N-acetylmuramic acid-6-phosphate etherase [Pseudonocardia sp. P1]
          Length = 321

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 23/134 (17%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEAS 102
           AVE+++   GR+V  G G +G +    A+ LA T             G P     A E +
Sbjct: 57  AVERLE-RGGRMVYGGAGTAGRLAVLDATELAPTYGVGDDRVVALLAGGPDAMTRAVEGA 115

Query: 103 HGDLGMITR---------DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             D G             DDL+I +S SG +   +A+L  AR      +A+ +   SV+A
Sbjct: 116 EDDTGAARADLAALDLGPDDLVIAISASGRTPYARALLVAAREAGAATVAVANNPGSVMA 175

Query: 154 CHADIVLTLPKEPE 167
             AD+ +TL   PE
Sbjct: 176 ELADVAITLDTGPE 189


>gi|312953514|ref|ZP_07772353.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|310628575|gb|EFQ11858.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|315152005|gb|EFT96021.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0031]
          Length = 282

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+++IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIVSITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
           maxima CS-328]
 gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
           maxima CS-328]
          Length = 157

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 66/148 (44%), Gaps = 34/148 (22%)

Query: 221 SDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------ 273
           +DVM      PLV     PL DAI +L++ R G + V+D   KL G I+E DI       
Sbjct: 6   ADVMTPN---PLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSGV 62

Query: 274 ----------------------RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLR 310
                                 +  HK L   +V DVM   P + ++ D  L+ A +L+ 
Sbjct: 63  TPPAYITILDSVIYLENPSRYEKELHKALGQ-TVGDVMSNGPMITIKPDCSLSEAARLMN 121

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           Q  +  L V+D  +K IGI+   D++R 
Sbjct: 122 QKQVHRLPVLDGSKKLIGILTCGDIIRV 149



 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 30/53 (56%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM  NP VI  D  L  A+ LL Q+ I  L V+D+  K +G +   D++
Sbjct: 4   TVADVMTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDII 56


>gi|52550131|gb|AAU83980.1| conserved hypothetical protein [uncultured archaeon GZfos35B7]
          Length = 396

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 55/103 (53%), Gaps = 2/103 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P IDAI  L++       +VD+  +L GI T+ DI +   K   L    V  VM ++P 
Sbjct: 78  TPCIDAICELTDSGQRAAPIVDDNGELVGITTDYDIMKEGSKSQILKDTKVAKVMTRSPA 137

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +   +  A  ++R++N+  ++VVD+ +  +GIV   D+L+
Sbjct: 138 YVEQSESIGKARSIIRKNNVGRVLVVDENEDLVGIVTGGDILK 180



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 18/113 (15%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PK------ 294
           A +I+ +   G V VVDE + L GI+T GDI +  +K    ++V +V  +N P+      
Sbjct: 148 ARSIIRKNNVGRVLVVDENEDLVGIVTGGDILKRIYKPKRKMTVGEVKGENVPRMGQAVS 207

Query: 295 ------VILEDTLLTVA--MQLLRQHNI-SVLMVVDDCQKAIGIVHFLDLLRF 338
                 VI  D    +A    L++ H+I SV +V D   +  GIV   D++ +
Sbjct: 208 FIMSSPVISADIDANLADIANLMQTHDIRSVPIVTDGVPR--GIVTIPDIMVY 258


>gi|313637859|gb|EFS03190.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria seeligeri FSL S4-171]
          Length = 397

 Score = 49.7 bits (117), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDIIEKNVFYVYE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD   + +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKENRLVGIV 356


>gi|270339924|ref|ZP_06006470.2| inosine-5'-monophosphate dehydrogenase [Prevotella bergensis DSM
           17361]
 gi|270333283|gb|EFA44069.1| inosine-5'-monophosphate dehydrogenase [Prevotella bergensis DSM
           17361]
          Length = 549

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+   F + L+  +V++VM  +
Sbjct: 160 IRRGRTVRDALQMMHDYHIGGIPVVDKDNFLVGIVTNRDL--RFERRLDK-TVDEVMTSE 216

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N     + T LT A Q+L++H I  L VVD   + IG++ + D+ +
Sbjct: 217 NLVTTHQQTDLTAAAQILQEHKIEKLPVVDANNRLIGLITYKDITK 262


>gi|332877639|ref|ZP_08445382.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684388|gb|EGJ57242.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 489

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 34/201 (16%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  +A             P  SA M      A+AIA+       E  
Sbjct: 15  DDVLLIPNYSEVLPREVAITSQFTRNITLNVPIISAAMDTVTEAAMAIAMAR-----EGG 69

Query: 204 FYVLHPGGKLGTLFVCASDV-----MHSG---DSIPLVKIGCPLIDAITILSEKRFGCVA 255
             VLH   K  T+   A  +       SG   D + L  +   + DA   + E   G + 
Sbjct: 70  IGVLH---KNMTIEEQAKQIRKVKRAESGMIIDPVTL-HLDAKVADAKRCMKENNIGGIP 125

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNI 314
           +VD+   LKGI+T  D+   F +D NT  + +VM  KN  +  E T +  A ++L++  I
Sbjct: 126 IVDDNGILKGIVTNRDL--RFEQD-NTRPIVEVMTAKNLVIANEGTSMKEAEKILQRSKI 182

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             L VVD   K +G++ F D+
Sbjct: 183 EKLPVVDKNYKLVGLITFRDI 203


>gi|317504769|ref|ZP_07962728.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
           15606]
 gi|315664100|gb|EFV03808.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
           15606]
          Length = 494

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++ +   G + VVD+  KL GI+T  D+    H D     +++VM K+
Sbjct: 105 IRRGSSVKDALALMHDYHIGGIPVVDDDNKLVGIVTNRDLRFERHMD---KKIDEVMTKD 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+++ I  L VVD     +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLGAAAQILQENKIEKLPVVDKDNHLVGLITYKDITK 207


>gi|237507518|ref|ZP_04520233.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           MSHR346]
 gi|234999723|gb|EEP49147.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           MSHR346]
          Length = 465

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 298 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 356

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 357 DADARVVGIVTRADL 371


>gi|167753424|ref|ZP_02425551.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
 gi|167658049|gb|EDS02179.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
          Length = 490

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ ++ E + G + VV   Q L GI+T  D+   F +D+N   +++VM K   V   ++
Sbjct: 112 DALALMKENKIGGIPVVAPDQHLIGIVTNRDL--RFQRDMNR-KIDEVMTKEGLVTTHNS 168

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A  +L ++ I  L VVD   K +G++ + D+ +
Sbjct: 169 DLQRAADILLRNKIEKLPVVDADGKLVGLITYKDITK 205


>gi|226195289|ref|ZP_03790879.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pakistan 9]
 gi|225932662|gb|EEH28659.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pakistan 9]
          Length = 465

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 298 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 356

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 357 DADARVVGIVTRADL 371


>gi|315161650|gb|EFU05667.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0645]
          Length = 282

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASILADLAKQQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|126457333|ref|YP_001075437.1| HPP family/CBS domain-containing protein [Burkholderia pseudomallei
           1106a]
 gi|217419263|ref|ZP_03450770.1| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           576]
 gi|242311705|ref|ZP_04810722.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106b]
 gi|254193129|ref|ZP_04899564.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           S13]
 gi|126231101|gb|ABN94514.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106a]
 gi|169649883|gb|EDS82576.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           S13]
 gi|217398567|gb|EEC38582.1| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           576]
 gi|242134944|gb|EES21347.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106b]
          Length = 465

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 298 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 356

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 357 DADARVVGIVTRADL 371


>gi|325851860|ref|ZP_08171025.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola CRIS
           18C-A]
 gi|327312551|ref|YP_004327988.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola F0289]
 gi|325484702|gb|EGC87615.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola CRIS
           18C-A]
 gi|326944770|gb|AEA20655.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola F0289]
          Length = 494

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++++   G + VVD    L GI+T  D+   F + L+ L +++VM K 
Sbjct: 105 IRQGRTVKDALDMMADYHIGGIPVVDGENHLVGIVTNRDL--RFERHLDKL-IDEVMTKE 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T LT A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDITK 207


>gi|309776671|ref|ZP_07671645.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915419|gb|EFP61185.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 215

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--------DLNTL- 283
           + +   + D + I+SEK    + VV  G+KL G++TEG I +            +LN L 
Sbjct: 14  IDVNSKISDVVDIMSEKELHRIPVV-SGKKLVGLVTEGMISKKGASKATSLSIYELNYLL 72

Query: 284 ---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH-------FL 333
              SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+        FL
Sbjct: 73  SKTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTSNDVLSAFL 132

Query: 334 DLLRF 338
           D+L +
Sbjct: 133 DVLGY 137


>gi|269218023|ref|ZP_06161877.1| glutamine-fructose-6-phosphate transaminase [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269212958|gb|EEZ79298.1| glutamine-fructose-6-phosphate transaminase [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 375

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 7/127 (5%)

Query: 47  GELSFQFHCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           GE + +F    E+++ + G  R+V+TG+G S    + LAS L   G  +  +H AE  H 
Sbjct: 46  GEQTDKF----ERVRTLLGGRRLVLTGMGSSADAVTALASVLGRRGVEANTIHTAELLHY 101

Query: 105 DLGMITRDDLIIVLSWSGSSDE-LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            +  +  D  ++ +S SG S E ++      ++  +PL+A+T+  +S +A  A + + L 
Sbjct: 102 RMNALAPDSAVVAVSQSGESIEAVRMAAELRKKEGVPLVAVTNGPQSPLAEEAAVSIDLG 161

Query: 164 KEPESCP 170
              E  P
Sbjct: 162 AGDERGP 168


>gi|167922604|ref|ZP_02509695.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           BCC215]
 gi|284159971|ref|YP_001062484.2| HPP family/CBS domain-containing protein [Burkholderia pseudomallei
           668]
 gi|283775161|gb|ABN88360.2| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           668]
          Length = 397

 Score = 49.3 bits (116), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 230 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 288

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 289 DADARVVGIVTRADL 303


>gi|149013522|ref|ZP_01834154.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147762843|gb|EDK69795.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP19-BS75]
          Length = 203

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 2/121 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   A++ I+    +++I G+G SG+   +  S+L   G  S  V           ++  
Sbjct: 41  QIELAIKLIRE-ANQILIIGVGSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKD 99

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DLII  S SGS+ E++  L  A+R ++ +I+IT+ +   +A  +D VL L  + ES   
Sbjct: 100 NDLIIAFSLSGSTKEVEETLLNAKRKNVKIISITNYSSRNIAKLSDCVL-LTSKKESYLE 158

Query: 172 G 172
           G
Sbjct: 159 G 159


>gi|319957283|ref|YP_004168546.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis
           DSM 16511]
 gi|319419687|gb|ADV46797.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis
           DSM 16511]
          Length = 481

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED- 299
           DA  +++E R   V VVDE +KL GIIT  D+   F  D  +L V DVM   P V  +  
Sbjct: 107 DADAMMAEYRISGVPVVDENRKLLGIITNRDM--RFITD-KSLKVRDVMTPMPLVTAKKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 164 TSLDEAAKVLQEHKIEKLPIVDENGILTGLITIKDI 199


>gi|53722035|ref|YP_111020.1| hypothetical protein BPSS1014 [Burkholderia pseudomallei K96243]
 gi|121596764|ref|YP_989774.1| HPP family/CBS domain-containing protein [Burkholderia mallei
           SAVP1]
 gi|124382643|ref|YP_001024259.1| HPP family protein [Burkholderia mallei NCTC 10229]
 gi|254262458|ref|ZP_04953323.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1710a]
 gi|52212449|emb|CAH38475.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|121224562|gb|ABM48093.1| membrane protein, HPP family/CBS domain [Burkholderia mallei SAVP1]
 gi|124290663|gb|ABM99932.1| membrane protein, HPP family/CBS domain protein [Burkholderia
           mallei NCTC 10229]
 gi|254213460|gb|EET02845.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1710a]
          Length = 397

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 230 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 288

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 289 DADARVVGIVTRADL 303


>gi|167839602|ref|ZP_02466286.1| HPP family protein [Burkholderia thailandensis MSMB43]
          Length = 392

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + L+  D+M ++P  I  DT L  AM LL +H I  L VV
Sbjct: 225 EDLESLLRETEL-RAYARTFDELTCADIMSRHPISITPDTPLPAAMTLLDRHRIKALPVV 283

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 284 DAHARVVGIVTRADL 298


>gi|281412873|ref|YP_003346952.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
           RKU-10]
 gi|281373976|gb|ADA67538.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
           RKU-10]
          Length = 482

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M    K+I+   
Sbjct: 104 EAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV--RFEKNLSK-KIKDLMTPREKLIVAPP 160

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 161 DISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|170289271|ref|YP_001739509.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
 gi|170176774|gb|ACB09826.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
          Length = 482

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M    K+I+   
Sbjct: 104 EAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV--RFEKNLSK-KIKDLMTPREKLIVAPP 160

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 161 DISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|15644099|ref|NP_229148.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
 gi|148270565|ref|YP_001245025.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
           RKU-1]
 gi|4981907|gb|AAD36418.1|AE001789_3 inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
 gi|147736109|gb|ABQ47449.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
           RKU-1]
          Length = 482

 Score = 49.3 bits (116), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M    K+I+   
Sbjct: 104 EAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV--RFEKNLSK-KIKDLMTPREKLIVAPP 160

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 161 DISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|310644607|ref|YP_003949366.1| 6-phospho 3-hexuloisomerase domain protein [Paenibacillus polymyxa
           SC2]
 gi|309249558|gb|ADO59125.1| 6-phospho 3-hexuloisomerase domain protein [Paenibacillus polymyxa
           SC2]
          Length = 185

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A   +V + G G+SG +   LA  L   G  ++ V     + G    ++  DL+I+ S S
Sbjct: 34  AAANKVFVAGAGRSGFMIRSLAMRLMHMGVQAYVV-GETVTPG----LSEGDLLIIGSGS 88

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL---PKEPESCPHG-LAPTT 177
           G +  L ++   A++    L  +T+  +S +   ADI++ L   PK+P S  +  + P  
Sbjct: 89  GETKSLVSMADKAKKLGASLAVLTTSPESTIGKLADIIVKLPGAPKDPSSKDYQTIQPMG 148

Query: 178 SAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
           S   Q  L  GDAL +  ++ R  +    Y  H
Sbjct: 149 SLFEQTLLLYGDALVLRTMQLRKLTSESMYGQH 181


>gi|222100218|ref|YP_002534786.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
           4359]
 gi|221572608|gb|ACM23420.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
           4359]
          Length = 487

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           +A+ ++SE + G + VVDE  KL G++T  DI   F ++L+   ++D+M    K+I+   
Sbjct: 109 EAVDLMSEYKIGGLPVVDEEGKLVGLLTNRDI--RFERNLSK-KIKDLMTPREKLIVAPP 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L  A ++L +H I  L +V    K +G++   D+L
Sbjct: 166 DISLEKAKEILHEHRIEKLPLVSRDNKLVGLITIKDIL 203


>gi|62738150|pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
           A Resolution
 gi|62738151|pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
           A Resolution
          Length = 494

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 56/98 (57%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M    K+I+   
Sbjct: 116 EAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDV--RFEKNLSK-KIKDLMTPREKLIVAPP 172

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 173 DISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 210


>gi|288800856|ref|ZP_06406313.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288332317|gb|EFC70798.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 494

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ I+SE   G + VVD    L GI+T  D+   F ++L+ L ++DVM  +
Sbjct: 105 IQRGSKVKDALAIMSEYHIGGIPVVDAHNCLVGIVTNRDL--RFERNLDKL-IDDVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N       T L  A Q+L+++ I  L VVD     +G++ + D+ +
Sbjct: 162 NLVTTHTQTDLVAAAQILQENKIEKLPVVDAENHLVGLITYKDITK 207


>gi|134283429|ref|ZP_01770129.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           305]
 gi|167906379|ref|ZP_02493584.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           NCTC 13177]
 gi|134245178|gb|EBA45272.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           305]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 215 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 273

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 274 DADARVVGIVTRADL 288


>gi|53717049|ref|YP_105844.1| HPP family protein [Burkholderia mallei ATCC 23344]
 gi|67640319|ref|ZP_00439130.1| membrane protein, HPP family/CBS domain [Burkholderia mallei GB8
           horse 4]
 gi|126447907|ref|YP_001078328.1| HPP family/CBS domain-containing protein [Burkholderia mallei NCTC
           10247]
 gi|251768042|ref|ZP_02269306.2| membrane protein, HPP family/CBS domain [Burkholderia mallei
           PRL-20]
 gi|254174277|ref|ZP_04880939.1| membrane protein, HPP family/CBS domain [Burkholderia mallei ATCC
           10399]
 gi|254183499|ref|ZP_04890091.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1655]
 gi|254190125|ref|ZP_04896634.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254356873|ref|ZP_04973148.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           2002721280]
 gi|52423019|gb|AAU46589.1| HPP family protein [Burkholderia mallei ATCC 23344]
 gi|126240761|gb|ABO03873.1| membrane protein, HPP family/CBS domain protein [Burkholderia
           mallei NCTC 10247]
 gi|148025900|gb|EDK84023.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           2002721280]
 gi|157937802|gb|EDO93472.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695323|gb|EDP85293.1| membrane protein, HPP family/CBS domain [Burkholderia mallei ATCC
           10399]
 gi|184214032|gb|EDU11075.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1655]
 gi|238521017|gb|EEP84472.1| membrane protein, HPP family/CBS domain [Burkholderia mallei GB8
           horse 4]
 gi|243060961|gb|EES43147.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           PRL-20]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 215 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 273

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 274 DADARVVGIVTRADL 288


>gi|303244832|ref|ZP_07331160.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484782|gb|EFL47718.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 133

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 6/128 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L   FV   D+M+ G  I  V +   + D I ++ E     V V D+     GIIT+ DI
Sbjct: 2   LSNYFV--RDLMNRG--IYEVSLKDKVSDVIKLMGENNISSVVVSDDNNVYWGIITDIDI 57

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIV 330
            +++ ++L+ L  ED+MI     I     L  A  L+ ++NI  L VV + +  K IG++
Sbjct: 58  LKHYTENLDELKAEDIMISKLITISPTAPLEKAAALMAENNIHHLYVVSELREDKIIGVL 117

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 118 SSKDIVKL 125


>gi|288932303|ref|YP_003436363.1| hypothetical protein Ferp_1951 [Ferroglobus placidus DSM 10642]
 gi|288894551|gb|ADC66088.1| protein of unknown function DUF39 [Ferroglobus placidus DSM 10642]
          Length = 493

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  IL E     + VV+E  +L GI+T  DI R   +      VED+M +       + 
Sbjct: 394 EAAKILIENEIDHLPVVNEKGELIGIVTSWDIARAVARG-KVGKVEDIMTRKVITTTMEE 452

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +A + + QHNIS L VVD   + +G+V   DL + 
Sbjct: 453 PIEIAARKMEQHNISALPVVDKDNRVVGVVSSEDLSKL 490


>gi|167849442|ref|ZP_02474950.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           B7210]
 gi|254300396|ref|ZP_04967842.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           406e]
 gi|157810026|gb|EDO87196.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           406e]
          Length = 382

 Score = 49.3 bits (116), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 215 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 273

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 274 DADARVVGIVTRADL 288


>gi|167914709|ref|ZP_02501800.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           112]
          Length = 311

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 144 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 202

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 203 DADARVVGIVTRADL 217


>gi|10697120|emb|CAC12687.1| hypothetical protein [Thauera aromatica]
          Length = 223

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 15/119 (12%)

Query: 231 PLVKIGCPLI-DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--------- 280
           P+V  G  L+ +A  I SE     + VVD+G +L+G+IT     R  H  L         
Sbjct: 11  PIVLTGDTLLSEAKRIFSEANIHALPVVDDG-RLRGLITRAGCLRAAHAALRTQDTDELN 69

Query: 281 ---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              N + V+D+M++NP  I  D  +   +Q+ ++H +  L V+D     +GI+  +++ 
Sbjct: 70  YFSNRVKVKDIMVRNPATIDADDTMEHCLQVGQEHGVGQLPVMDKG-NVVGIISAIEMF 127


>gi|76818811|ref|YP_335166.1| HPP family protein [Burkholderia pseudomallei 1710b]
 gi|76583284|gb|ABA52758.1| HPP family protein [Burkholderia pseudomallei 1710b]
          Length = 346

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 179 EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 237

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 238 DADARVVGIVTRADL 252


>gi|288924569|ref|ZP_06418506.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae D17]
 gi|315607431|ref|ZP_07882427.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae ATCC
           33574]
 gi|288338356|gb|EFC76705.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae D17]
 gi|315250863|gb|EFU30856.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae ATCC
           33574]
          Length = 494

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 56/106 (52%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ +++E   G + VVDE   L GI+T  D+    H D     +++VM  K
Sbjct: 105 IRRGSTVKDALGMMAEYHIGGIPVVDEDNHLVGIVTNRDLRFELHLDKK---IDEVMTSK 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N       T L  A Q+L+++ I  L VVD+    +G++ + D+ +
Sbjct: 162 NLVTTHLQTDLAAAAQILQENKIEKLPVVDNENHLVGLITYKDITK 207


>gi|219849520|ref|YP_002463953.1| CBS domain-containing membrane protein [Chloroflexus aggregans DSM
           9485]
 gi|219543779|gb|ACL25517.1| CBS domain containing membrane protein [Chloroflexus aggregans DSM
           9485]
          Length = 154

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 60/115 (52%), Gaps = 12/115 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FR-------NFHKDL 280
           V +  PL +A+ ++ E     + VV +  +L+GIIT+GDI      R       +  + L
Sbjct: 26  VNLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADVMRIAGLDPVDIAQAL 85

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + V +VM +NP  +  +T L  A  L+ ++ I  L V+D+ ++ IGI+   DL
Sbjct: 86  RNVKVYEVMTENPIAVTPETGLREAALLMIENKIGGLPVIDEHKRVIGIITESDL 140


>gi|218781691|ref|YP_002433009.1| signal transduction protein with CBS domains [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763075|gb|ACL05541.1| putative signal transduction protein with CBS domains
           [Desulfatibacillum alkenivorans AK-01]
          Length = 202

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 231 PL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDV 288
           PL V +   + +AI ++       + VV++G  L+G +T  D+ +     +   LS+ D+
Sbjct: 11  PLCVDVNASISEAIKLMQGNSIRHLPVVEKGGVLRGFVTLSDLKQGLIPSMVGDLSLTDL 70

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           MIKNP  +  D  +  A Q++ +  I  L VVDD    +GI+   D+LR
Sbjct: 71  MIKNPITVKPDEDVEDAAQIIYRKKIGGLPVVDDNNHLLGIITVTDILR 119


>gi|313898185|ref|ZP_07831723.1| CBS domain protein [Clostridium sp. HGF2]
 gi|312956949|gb|EFR38579.1| CBS domain protein [Clostridium sp. HGF2]
          Length = 215

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--------DLNTL- 283
           + +   + D + I+SEK    + V+  G+KL G++TEG I +            +LN L 
Sbjct: 14  IDVNSKISDVVDIMSEKELHRIPVI-SGKKLVGLVTEGMISKKGASKATSLSIYELNYLL 72

Query: 284 ---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH-------FL 333
              SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+        FL
Sbjct: 73  SKTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTSNDVLSAFL 132

Query: 334 DLLRF 338
           D+L +
Sbjct: 133 DILGY 137


>gi|148244141|ref|YP_001220617.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH9]
 gi|150375709|ref|YP_001312306.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|147742270|gb|ABQ50513.1| hexulose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947697|gb|ABR53632.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
          Length = 183

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G+SG + +  A  L   G  +F +  +         I +DDL IV+S SGS++
Sbjct: 39  RIFIAGKGRSGFVANSFAMRLNQLGKQAFVIGESTTPS-----IQKDDLFIVISGSGSTE 93

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            L+ +   A+     ++ +T++  S +   AD V+ LP
Sbjct: 94  HLRLLAEKAKSVDAKVVLLTTKLDSAIGEIADTVVELP 131


>gi|323467483|gb|ADX71170.1| Transcriptional regulator [Lactobacillus helveticus H10]
          Length = 283

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 70/153 (45%), Gaps = 15/153 (9%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSF------------QFHCAVEKIKAIKGRVV-IT 70
           V   + +II E    +S+   LQ  LS             +   AVE I   K RVV I 
Sbjct: 79  VDNKIETIITENDNPTSVLFKLQTNLSKNIVDLGRSIDHKELKQAVELID--KARVVFIA 136

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G SG         L  +G    F+ ++  +   +  IT++D++++ S+SG + E   +
Sbjct: 137 GEGASGLAAEDFFDKLIRSGKEVIFIKSSHIALEGITNITKNDVLVIFSYSGMTQEPLLM 196

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
              AR+    ++ IT E  S +   +DIV++LP
Sbjct: 197 AKQARKNHAKIVLITREKTSPLRQISDIVISLP 229


>gi|294497657|ref|YP_003561357.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294347594|gb|ADE67923.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium QM
           B1551]
          Length = 185

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V +TG G+SG +G   A  +   G  ++ +     S       T+DDL+I+ S SG + 
Sbjct: 38  KVFVTGAGRSGLMGKSFAMRMMHMGIDAYVIGETVTS-----TFTQDDLLIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP----ESCPHGLAPTTSAIM 181
            L  I   A+     +  +T    S +   AD ++ LP  P    +S    + P  S   
Sbjct: 93  SLIPIAQKAKELGGKVGVVTISPDSTLGKLADFIVKLPGAPKDQEQSSYQTVQPMASLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DAL +  +E +    +  Y  H
Sbjct: 153 QTLLLFYDALILRFMEKKELDTHTMYGKH 181


>gi|84495172|ref|ZP_00994291.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
 gi|84384665|gb|EAQ00545.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
          Length = 294

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 75/163 (46%), Gaps = 8/163 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKG-----RVVITGIGKSGHIGSKLASTLASTGTP 92
           ++SL+SS   E + Q      K KA  G     RV I GIG S  +GS L   L   G  
Sbjct: 112 VASLDSSAVEETAQQLDRQALK-KAADGLAGATRVDIYGIGASAIVGSDLQQKLHRIGVV 170

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           SF  +    +     ++T+ D+ I +S SG++ E    L  AR      IAIT+   S +
Sbjct: 171 SFAWNDPHIALTSATLLTKKDVAIGISHSGATSETIESLAAARERGATTIAITNFPLSPL 230

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           A  ADIVLT      S   G   T S I  L + D L IA+ +
Sbjct: 231 AKGADIVLTTAARETSLRSG--ATASRIAALTVVDCLFIAVAQ 271


>gi|116492804|ref|YP_804539.1| transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
 gi|116102954|gb|ABJ68097.1| transcriptional regulator, RpiR family [Pediococcus pentosaceus
           ATCC 25745]
          Length = 280

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 1/97 (1%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           +G+   + ++IV+S SG + E   I   A   +IP+IAIT E  S +A ++ + LT    
Sbjct: 168 VGLAKPNSVLIVVSDSGETKESCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDG 227

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            ES     A TTS + QL + D L  A L +++FS N
Sbjct: 228 GESGVLRTAATTSLLAQLYVVDLLYYAYL-TQDFSNN 263


>gi|327405588|ref|YP_004346426.1| CBS domain-containing protein [Fluviicola taffensis DSM 16823]
 gi|327321096|gb|AEA45588.1| CBS domain containing protein [Fluviicola taffensis DSM 16823]
          Length = 333

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 62/112 (55%), Gaps = 5/112 (4%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVED 287
           P++     +++ +  + + + G   V+++   LKG+I+  DI ++  +   +LN  S+ +
Sbjct: 219 PVIDENSSVLEVLNAVEDGKLGFALVINKSADLKGLISNADIRKSLIRTKGNLNQESISE 278

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLM--VVDDCQKAIGIVHFLDLLR 337
           +M   P VI E   +   +Q +++++  +L   VVD   KA GI+ F++L++
Sbjct: 279 IMNGKPLVIQETATVNDLLQQIKKYSFPILYLPVVDSGNKAKGILTFVNLIK 330


>gi|294633516|ref|ZP_06712075.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831297|gb|EFF89647.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 227

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G P  +   +L E     V VVD+  +  G+++E D+ R         +  D+M  +
Sbjct: 8   VRPGTPFKEIARVLDEYDITAVVVVDDQDRPVGVVSEADLLRRQTSGGRGSTARDLMT-S 66

Query: 293 PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P V+ E     V A + + +H++  L VVD   + IG+V   DL+R 
Sbjct: 67  PAVVAEPGWHAVRAARTMERHHVKRLPVVDGEGRLIGVVSRSDLVRL 113


>gi|86143072|ref|ZP_01061494.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
           blandensis MED217]
 gi|85830517|gb|EAQ48976.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
           blandensis MED217]
          Length = 490

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  +++E   G + +VD+   LKGI+T  D+   F KD     VE +  +N     E T
Sbjct: 112 DAKRLMAEHSIGGIPIVDQEGHLKGIVTNRDL--RFEKDNERAIVEVMTSENLITTAEGT 169

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+ A  +L+++ I  L VV +  K IG++ F D+ + 
Sbjct: 170 SLSQAEVILQENKIEKLPVVTNDNKLIGLITFRDITKL 207


>gi|289192493|ref|YP_003458434.1| protein of unknown function DUF39 [Methanocaldococcus sp. FS406-22]
 gi|288938943|gb|ADC69698.1| protein of unknown function DUF39 [Methanocaldococcus sp. FS406-22]
          Length = 507

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N     E
Sbjct: 405 IMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKRTIEEIMTRNVITAHE 462

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D       + + ++NIS + VVDD ++ +G+V   D+ R FG
Sbjct: 463 DEPADHVARKMSKNNISGVPVVDDYRRVVGVVTSEDISRLFG 504


>gi|212551113|ref|YP_002309430.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212549351|dbj|BAG84019.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
          Length = 491

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA+ ++SE + G + VVD+   L GI+T  D+   F KD   L ++ VM  +N     + 
Sbjct: 112 DALALMSEYKIGGIPVVDDNNYLVGIVTNRDL--RFRKDTEQL-IDKVMTSENLVTTSQS 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  +L+ + I  L VVD   K IG++ + D+ +
Sbjct: 169 TDLEAAADILQSYKIEKLPVVDIHNKLIGLITYKDITK 206


>gi|270299854|gb|ACZ68660.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus]
 gi|281334327|gb|ADA61411.1| 6-phospho-3-hexuloisomerase [Staphylococcus epidermidis]
          Length = 182

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G+SG + +  A  L   G  +F +  +         I +DDL IV+S SGS++
Sbjct: 38  RIFIAGKGRSGFVANSFAMRLNQLGKQAFVIGESTTPS-----IQKDDLFIVISGSGSTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            L+ +   A+     ++ +T++  S +   AD V+ LP
Sbjct: 93  HLRLLAEKAKSVDAKVVLLTTKLDSAIGEIADTVVELP 130


>gi|261402995|ref|YP_003247219.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369988|gb|ACX72737.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 296

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 63/123 (51%), Gaps = 16/123 (13%)

Query: 229 SIPLVKIG-------------CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           SIP +++G             C L +   + +EK      VVD G KL G+I+  DI  N
Sbjct: 166 SIPNIRVGDVGIKEVWTISPNCTLKETAKLFAEKYISGAPVVDRG-KLVGVISLHDIAEN 224

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V++VM KN   I ++  +  A++++ ++N+  L++VDD +K +GI+   D+
Sbjct: 225 IEN--VDKKVKEVMRKNVLTIHKNEKIHDALKIMNKNNVGRLVIVDDDEKIVGIITRTDI 282

Query: 336 LRF 338
           L+ 
Sbjct: 283 LKI 285


>gi|225848313|ref|YP_002728476.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643808|gb|ACN98858.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 488

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 88/203 (43%), Gaps = 32/203 (15%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLES------- 196
           D VL LP++ +  PH                P  SA M       LAIAL          
Sbjct: 13  DDVLLLPQKSDVLPHETDVSSYLTPNIKVNIPLVSAAMDTVTEHRLAIALAREGGIGIIH 72

Query: 197 RNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           RN S E+  Y +    K  +  +         D +  +K    + +A+ I+S  +   V 
Sbjct: 73  RNMSIEDQMYEVEKVKKAESGMIT--------DPV-TIKPNQTVQEALNIMSIYKISGVP 123

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNI 314
           VVD+  KL GI+T  D+ R  HK      V + M K P +  ++ + L  A+++L++H +
Sbjct: 124 VVDDENKLVGILTNRDL-RFIHKKDYNKPVYEFMTKAPLITAKEGISLDDAIEILQKHKV 182

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L VVDD     G++   D+++
Sbjct: 183 EKLPVVDDNGVLKGLITIKDIVK 205


>gi|15678154|ref|NP_275269.1| inosine-5'-monophosphate dehydrogenase related protein VII
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2621166|gb|AAB84632.1| inosine-5'-monophosphate dehydrogenase related protein VII
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 302

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 46/82 (56%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           A + E  ++KGI+T  DI  +       + V D+M KN   + +DT++  A++++ +HNI
Sbjct: 214 APIVEDDEVKGIVTLSDITASIAAGTEFMQVSDIMSKNIITVKQDTMIADAIEVMNKHNI 273

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
             L+V D   +  GI+   D+L
Sbjct: 274 GRLIVTDSEGRPTGIITRTDIL 295


>gi|320333947|ref|YP_004170658.1| CBS domain-containing protein [Deinococcus maricopensis DSM 21211]
 gi|319755236|gb|ADV66993.1| CBS domain containing protein [Deinococcus maricopensis DSM 21211]
          Length = 207

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-------- 288
            P++DA+ IL E+ F  + V+D G KL GI+T  D+         TLSV ++        
Sbjct: 18  TPVLDALRILKERGFRRLPVMD-GSKLAGIVTRKDLKDAMPSKATTLSVWELNYMLSKLT 76

Query: 289 ---MIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              M+  P V   E   +  A   +++HN+  L V+D   +  GI+   D+LR
Sbjct: 77  VGEMMSRPVVTADEGEYMEDAALRMQEHNVGGLPVLDTTGRMTGIITITDVLR 129


>gi|12003348|gb|AAG43530.1|AF211851_1 OpuCA [Listeria monocytogenes]
          Length = 169

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 43  AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVMDMIEKNVFYVYE 96

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD  ++ +GIV
Sbjct: 97  DTLLRDTVQRILKRGYKYIPVVDKDKRLVGIV 128


>gi|109900462|ref|YP_663717.1| RpiR family transcriptional regulator [Pseudoalteromonas atlantica
           T6c]
 gi|109702743|gb|ABG42663.1| transcriptional regulator, RpiR family [Pseudoalteromonas atlantica
           T6c]
          Length = 282

 Score = 48.9 bits (115), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           FH AVE +K+ K R++I G+G S  +G   +  L   G  +       A       ++ +
Sbjct: 120 FHQAVELLKSAK-RILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL+  +S SGS+ E+  ++  A++ S  +I +T    + V+  ADI L    E ES    
Sbjct: 179 DLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLADIKLYSVAEEESAR-- 236

Query: 173 LAPTTSAIMQLAIGDALAIALLES 196
           L+   +   Q  I D L IA+ +S
Sbjct: 237 LSSIMARTAQEFIIDILFIAITQS 260


>gi|15668271|ref|NP_247064.1| hypothetical protein MJ_0100 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2495797|sp|Q57564|Y100_METJA RecName: Full=Uncharacterized protein MJ0100
 gi|1498865|gb|AAB98080.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 509

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N     E
Sbjct: 407 IMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNVITAHE 464

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D  +      + ++NIS + VVDD ++ +GIV   D+ R FG
Sbjct: 465 DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 506


>gi|227828393|ref|YP_002830173.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229585622|ref|YP_002844124.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620585|ref|YP_002915411.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|227460189|gb|ACP38875.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228020672|gb|ACP56079.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381655|gb|ACR42743.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|323475466|gb|ADX86072.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
          Length = 129

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLT 303
           I+++   G V VVD G+ + GIITE D+ R   K  +  +  E++M  +   I ED+ +T
Sbjct: 29  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGRSLDVKAEEIMTASLITIKEDSPIT 87

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 88  GALSLMRTYNIRHLPVIDHDGNLRGIISIRDIAR 121


>gi|227538024|ref|ZP_03968073.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242100|gb|EEI92115.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 491

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM-----HSG-- 227
           P  SA M    G  LAIA+ ++         +LH   K  T+   A++V       SG  
Sbjct: 47  PLVSAAMDTVTGSDLAIAIAQAGGIG-----MLH---KNMTITEQAAEVRKVKRSESGMI 98

Query: 228 -DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            D + L++    + DA  I+SE + G + ++D   KL GI+T  D+   F KD+     E
Sbjct: 99  QDPVTLLETAT-VGDAFKIMSEHKIGGIPIIDGSGKLVGIVTNRDL--RFQKDMKRPISE 155

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   N  V  E T L  A  +L+ + I  L VV+D     G++ F D+ ++
Sbjct: 156 LMTRDNLVVAPEGTDLVQAELILQNYKIEKLPVVNDEGLLKGLITFKDIQKY 207


>gi|283807213|pdb|3KPC|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine
          Length = 124

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N     E
Sbjct: 22  IMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNVITAHE 79

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D  +      + ++NIS + VVDD ++ +GIV   D+ R FG
Sbjct: 80  DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 121


>gi|152964711|ref|YP_001360495.1| inosine-5'-monophosphate dehydrogenase [Kineococcus radiotolerans
           SRS30216]
 gi|151359228|gb|ABS02231.1| inosine-5'-monophosphate dehydrogenase [Kineococcus radiotolerans
           SRS30216]
          Length = 510

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D   +    R   V VVD   +L GI+T  D+   F  D +   V DVM K P V   
Sbjct: 121 LADVDVLCGRYRISGVPVVDADGRLVGIVTNRDL--RFESDFSR-PVRDVMTKAPLVTAP 177

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + T  AMQLLRQH I  L +VD   +  G++   D ++
Sbjct: 178 VGISTDDAMQLLRQHKIEKLPIVDAENRLTGLITVKDYVK 217


>gi|300728337|ref|ZP_07061702.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
 gi|299774402|gb|EFI71029.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
          Length = 494

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ +++E   G + VVDE   L GI+T  D+   F + ++   ++DVM K 
Sbjct: 105 IQRGRTVKDALDMMAEYHIGGIPVVDEDNHLVGIVTNRDL--RFERRMDR-KIDDVMTKE 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+++ I  L VVD     +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLLAAAQILQENKIEKLPVVDAENHLVGLITYKDITK 207


>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
 gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
          Length = 150

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 23/119 (19%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL----- 283
            I +LS +    + VVD   ++ G ++E D+ +             +F  D N L     
Sbjct: 23  VIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDTNQLIRNIV 82

Query: 284 -----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + + M K P V+ ED  L VA   L +H    L VVDD  + +GIV  +D+LR
Sbjct: 83  KIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDDSMQLVGIVRRIDVLR 141


>gi|315303155|ref|ZP_07873826.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria ivanovii FSL F6-596]
 gi|313628486|gb|EFR96948.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria ivanovii FSL F6-596]
          Length = 397

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 9/92 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILE 298
           AIT++ EKR   + VVDEG  LKG I    I      DLN     SV D++ KN   + E
Sbjct: 271 AITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTATSVVDILEKNVFYVHE 324

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL   +Q + +     + VVD   + +GIV
Sbjct: 325 DTLLRDTVQRILKRGYKYIPVVDKENRLVGIV 356


>gi|257867470|ref|ZP_05647123.1| AcuB family protein [Enterococcus casseliflavus EC30]
 gi|257873799|ref|ZP_05653452.1| AcuB family protein [Enterococcus casseliflavus EC10]
 gi|257877548|ref|ZP_05657201.1| AcuB family protein [Enterococcus casseliflavus EC20]
 gi|257801526|gb|EEV30456.1| AcuB family protein [Enterococcus casseliflavus EC30]
 gi|257807963|gb|EEV36785.1| AcuB family protein [Enterococcus casseliflavus EC10]
 gi|257811714|gb|EEV40534.1| AcuB family protein [Enterococcus casseliflavus EC20]
          Length = 215

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 14/111 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLS 284
            P+ DA+ ++ +     + VVD+G KL G+ITEG I                +  LN  +
Sbjct: 18  TPIFDAVDLMKQHDIHRLPVVDDG-KLVGLITEGTIAEATPSKATSLSVYEMNYLLNKTT 76

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M+K    I  D LL  A+ ++R  N+ VL V+DD    +GI+   D+
Sbjct: 77  VADIMLKKVTTIEPDALLEDAISVMRSENVGVLPVMDD-DALVGIITNNDI 126


>gi|167723476|ref|ZP_02406712.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           DM98]
          Length = 261

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 94  EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 152

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 153 DADARVVGIVTRADL 167


>gi|323478188|gb|ADX83426.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 129

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLT 303
           I+++   G V VVD G+ + GIITE D+ R   K  +  +  E++M  +   I ED+ +T
Sbjct: 29  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGRSLDVKAEEIMTASLITIKEDSPIT 87

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 88  GALSLMRTYNIRHLPVIDHDGNLRGIISIRDIAR 121


>gi|291514447|emb|CBK63657.1| inosine-5'-monophosphate dehydrogenase [Alistipes shahii WAL 8301]
          Length = 492

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK-VILED 299
           DA+ ++ E + G + VVD  + L GI+T  D+   F +D+ +  +E+VM    + V   +
Sbjct: 112 DALNLMKENKIGGIPVVDADRMLIGIVTNRDL--RFQRDM-SRRIEEVMTPGDRLVTTHN 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++L    I  L VVDD  + +G++ + D+ +
Sbjct: 169 PELAHAQEILLNSKIEKLPVVDDAGRLVGLITYKDITK 206


>gi|295113482|emb|CBL32119.1| transcriptional regulator, RpiR family [Enterococcus sp. 7L76]
          Length = 282

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 60/135 (44%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A+   IP+I+IT + KSV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASILADLAKHQGIPIISITQDEKSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 225

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 36/109 (33%), Positives = 55/109 (50%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------------EDV 288
           DA+  + EK    + V+ +G KL G++T+ D+ R    D  TL V            +D+
Sbjct: 22  DAMQRMKEKGISMLPVIKKG-KLVGVVTDRDLKRASASDATTLEVHELLFLITKIKVQDI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M +NP  I  D  +  A ++L + NIS   V+D+  K IGI+   DL R
Sbjct: 81  MTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFR 129


>gi|283807209|pdb|3KPB|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807210|pdb|3KPB|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807211|pdb|3KPB|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807212|pdb|3KPB|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807214|pdb|3KPD|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807215|pdb|3KPD|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807216|pdb|3KPD|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807217|pdb|3KPD|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine
          Length = 122

 Score = 48.5 bits (114), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N     E
Sbjct: 20  IMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNVITAHE 77

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D  +      + ++NIS + VVDD ++ +GIV   D+ R FG
Sbjct: 78  DEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRLFG 119


>gi|188996741|ref|YP_001930992.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931808|gb|ACD66438.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 488

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 86/203 (42%), Gaps = 32/203 (15%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLES------- 196
           D VL LP++ +  PH                P  SA M       LAIAL          
Sbjct: 13  DDVLLLPQKSDVLPHETDVSSYLTPNIKVNIPLVSAAMDTVTEHRLAIALAREGGIGIIH 72

Query: 197 RNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           RN S E+    +    K  +  +     +    S+          +A+ I+S  +   V 
Sbjct: 73  RNMSIEDQMREVEKVKKAESGMITDPVTIRPNQSVK---------EALEIMSIYKISGVP 123

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNI 314
           VVD+ +KL GI+T  D+ R  HK      V + M K P V  ++ + L  A+ +L++H +
Sbjct: 124 VVDDEKKLVGILTNRDL-RFIHKKDYEKPVYEFMTKAPLVTAKEGISLDEAIDILQKHKV 182

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L VVDD  +  G++   D+++
Sbjct: 183 EKLPVVDDKGRLKGLITIKDIVK 205


>gi|307596247|ref|YP_003902564.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307551448|gb|ADN51513.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 156

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 60/105 (57%), Gaps = 7/105 (6%)

Query: 238 PLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
           P I+A+ +++++  G V VV++    KL+GIITE D+ R     L     V  V    P+
Sbjct: 33  PFIEAVDLMAKENTGSVVVVEDLNSMKLRGIITERDVIRALANRLPLDTPVGKVGTMGPR 92

Query: 295 VI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+   ++D++ TVA  L+  + +  ++VVDD  + +G++   DLL
Sbjct: 93  VVRARVDDSVGTVA-SLMVNYRVRHVIVVDDEDRVVGVISIRDLL 136


>gi|114046626|ref|YP_737176.1| CBS domain-containing protein [Shewanella sp. MR-7]
 gi|113888068|gb|ABI42119.1| CBS domain containing protein [Shewanella sp. MR-7]
          Length = 143

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 64/129 (49%), Gaps = 16/129 (12%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
           +D+M +   +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R      
Sbjct: 6   ADIMRT--RVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRAISPNL 62

Query: 278 -------KDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                  KDL TL   V  VM +NP  +     L  A + L +HNI  L V+D+    +G
Sbjct: 63  GSSAETAKDLETLQKRVHQVMTRNPVTVAPHVTLDCATRTLLEHNIGCLPVLDN-GDLVG 121

Query: 329 IVHFLDLLR 337
           IV + DLLR
Sbjct: 122 IVTWKDLLR 130


>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
           proteobacterium HTCC2255]
 gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
           proteobacterium HTCC2255]
          Length = 180

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 225 HSGDSIPLVK-IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNT 282
           +    +PL K     + DA+  +S+K +G V VVD  +K+ G++TE DI      K+LN 
Sbjct: 18  YRSKQMPLTKSPDTNVFDAVNAMSKKNYGSVVVVDTEKKVIGVVTERDIMNKVVGKELNP 77

Query: 283 LS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
               +  +M +NPK+  E   +   ++++       L VVDD  K
Sbjct: 78  KETLLSSIMTENPKLARETDDMLEWLRIMSNERFRRLPVVDDQGK 122


>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
 gi|15623234|dbj|BAB67223.1| 164aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 164

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 48/92 (52%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           + +   G + V+D+  K+ GIITE DI +   +      V+D M +N   + EDT +T A
Sbjct: 29  MKKHNLGALVVIDDNDKIVGIITERDIVKVVAEGKLDAKVKDYMTRNVIGVTEDTPITDA 88

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++++  H    L ++    K IGIV   DL +
Sbjct: 89  LEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSK 120


>gi|117919508|ref|YP_868700.1| CBS domain-containing protein [Shewanella sp. ANA-3]
 gi|117611840|gb|ABK47294.1| CBS domain containing protein [Shewanella sp. ANA-3]
          Length = 143

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
           +D+M +   +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R      
Sbjct: 6   ADIMRT--RVVTVEMDDRLTVAKEIFEQANFHHLLVVDE-YKLEGVLSERDLLRAISPNL 62

Query: 278 -------KDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                  KDL TL   V  VM +NP  +     L  A   L +HNI  L V+D+    +G
Sbjct: 63  GSSAETAKDLETLQKRVHQVMTRNPVTVAPHVSLDAATHTLLEHNIGCLPVLDN-GDLVG 121

Query: 329 IVHFLDLLR 337
           IV + DLLR
Sbjct: 122 IVTWKDLLR 130


>gi|312137471|ref|YP_004004808.1| hypothetical protein Mfer_1260 [Methanothermus fervidus DSM 2088]
 gi|311225190|gb|ADP78046.1| protein of unknown function DUF39 [Methanothermus fervidus DSM
           2088]
          Length = 510

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 2/91 (2%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E     V +VD+  KL+GI+T  DI     +   T  +E++M K      E+  + VA +
Sbjct: 416 ENNINHVPIVDKNNKLRGIVTSWDIANAVAE--GTKKLEEIMTKRVITAKENEPIDVAAR 473

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++NIS L VVD   + IGIV   D+ R 
Sbjct: 474 RMDKYNISGLPVVDKDNRVIGIVTAEDISRI 504


>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 161

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMIKNPKV 295
           +A  ++ E   G V +++EG+ L+GI+TE D+   +      +    + V ++M K+P  
Sbjct: 37  EAAKLMKENNIGSVVIMEEGE-LRGIVTERDLITRYIAAEDGRRPEDVKVSEIMTKDPIT 95

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           I ++T +  A +++ + NI  L+VV+   + +GI+   D+L+  
Sbjct: 96  IRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILKVA 139


>gi|227831149|ref|YP_002832929.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580034|ref|YP_002838434.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581305|ref|YP_002839704.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998647|ref|YP_003420415.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457597|gb|ACP36284.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228010750|gb|ACP46512.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012021|gb|ACP47782.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446543|gb|ADB88045.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 129

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLT 303
           I+++   G V VVD G+ + GIITE D+ R   K  +  +  E++M  +   I ED+ +T
Sbjct: 29  IMTDNNVGSVIVVDNGKPI-GIITERDVVRAIGKGKSLDVKAEEIMTASLITIKEDSPIT 87

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ L+R +NI  L V+D      GI+   D+ R
Sbjct: 88  GALSLMRTYNIRHLPVIDHDGNLRGIISIRDIAR 121


>gi|320333882|ref|YP_004170593.1| inosine-5'-monophosphate dehydrogenase [Deinococcus maricopensis
           DSM 21211]
 gi|319755171|gb|ADV66928.1| inosine-5'-monophosphate dehydrogenase [Deinococcus maricopensis
           DSM 21211]
          Length = 488

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 53/199 (26%), Positives = 84/199 (42%), Gaps = 26/199 (13%)

Query: 157 DIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL LP+  E  PH +              P  SA M      A+AIA+       E  
Sbjct: 18  DDVLLLPRYSEVLPHQVDLGAQLTRRVRLNVPFVSAAMDTVTETAMAIAMAR-----EGG 72

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI----DAITILSEKRFGCVAVVDE 259
             V+H    +         V  S   + +  I  P+     +A  +++E +   V +  +
Sbjct: 73  IGVIHKNMPIERQAEMVRKVKRSESGMIVDPITLPVTATVREADQMMAEYKISGVPITAD 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
             KL GIIT  D+   F +DL ++ V DVM K+  + +   T L  A ++ +QH I  L+
Sbjct: 133 DGKLLGIITNRDM--RFIEDL-SVPVADVMTKDQLITVPVGTSLETAQEIFKQHRIEKLL 189

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V DD     G++   D+ +
Sbjct: 190 VTDDAGYLKGLITIKDIAK 208


>gi|167572796|ref|ZP_02365670.1| HPP family protein [Burkholderia oklahomensis C6786]
          Length = 370

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  D+M +    I  DT L  AM LL +H I  L VV
Sbjct: 203 EDLESLLRETEL-RAYARTFDELSCADIMTRPAISIAPDTPLPAAMTLLDRHRIKALPVV 261

Query: 321 DDCQKAIGIVHFLDLLR 337
           D   + +GIV   DL R
Sbjct: 262 DANARVVGIVTRADLSR 278


>gi|91772371|ref|YP_565063.1| hypothetical protein Mbur_0311 [Methanococcoides burtonii DSM 6242]
 gi|91711386|gb|ABE51313.1| CBS-domain and DUF39-domain containing protein [Methanococcoides
           burtonii DSM 6242]
          Length = 500

 Score = 48.5 bits (114), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/127 (27%), Positives = 62/127 (48%), Gaps = 3/127 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           KL  +     D+M S   + +++      DA   + +K+F  + VVD+   L GI+T  D
Sbjct: 372 KLSRVSPLVGDIMTS--DVSIIQAEASFNDAAKTIMDKQFSHLPVVDKDNSLVGIVTAWD 429

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I +   K    L V+D+M K+      D  + +A   L  +N+S L V+D  ++ +GI+ 
Sbjct: 430 ISKAVAKAEYDL-VKDIMTKDVVTTSPDEAIDIAAFKLDSNNVSALPVIDAKKQVVGIIT 488

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 489 SDDISKL 495


>gi|167898045|ref|ZP_02485447.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           7894]
          Length = 239

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 72  EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 130

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 131 DADARVVGIVTRADL 145


>gi|108802060|ref|YP_642257.1| signal-transduction protein [Mycobacterium sp. MCS]
 gi|119871212|ref|YP_941164.1| signal-transduction protein [Mycobacterium sp. KMS]
 gi|126438039|ref|YP_001073730.1| signal-transduction protein [Mycobacterium sp. JLS]
 gi|108772479|gb|ABG11201.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. MCS]
 gi|119697301|gb|ABL94374.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. KMS]
 gi|126237839|gb|ABO01240.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. JLS]
          Length = 189

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 10/125 (8%)

Query: 217 FVCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            VCA DVM    S P+V +    PL +  ++L++  +  + VVDE   L G++T GD  R
Sbjct: 1   MVCAVDVM----SRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALR 56

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +T      ++  P V ++ +  L    +LL Q  I  + VVDD  + +G+V   
Sbjct: 57  ADPARHHTAG---AVMTTPAVAVDASADLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRG 113

Query: 334 DLLRF 338
           DLLR 
Sbjct: 114 DLLRL 118


>gi|84489485|ref|YP_447717.1| MetX [Methanosphaera stadtmanae DSM 3091]
 gi|84372804|gb|ABC57074.1| MetX [Methanosphaera stadtmanae DSM 3091]
          Length = 490

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + +VD+G+++ GIIT  D+ +    D N  S++D+M KN     E   L   ++ +++HN
Sbjct: 405 IPIVDDGKEIVGIITAWDLSKAIATDAN--SIDDIMTKNVLTCTEYDSLHKVIRKMKEHN 462

Query: 314 ISVLMVVDDCQKAIG 328
           IS L V+D   K IG
Sbjct: 463 ISGLPVIDKNHKVIG 477


>gi|150025865|ref|YP_001296691.1| IMP dehydrogenase [Flavobacterium psychrophilum JIP02/86]
 gi|149772406|emb|CAL43886.1| IMP dehydrogenase [Flavobacterium psychrophilum JIP02/86]
          Length = 490

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 32/203 (15%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  ++             P  SA M      A+AIA+ +     E  
Sbjct: 16  DDVLLIPSYSEVLPREVSIKTHFSRNITLNTPIVSAAMDTVTESAMAIAMAQ-----EGG 70

Query: 204 FYVLHPGGKLGTLFVCASDV-----MHSG---DSIPLVKIGCPLIDAITILSEKRFGCVA 255
             VLH   K  T+   A+ V       SG   D + L+ +   + DA   + E   G + 
Sbjct: 71  IGVLH---KNMTIEQQAAKVRKVKRAESGMIIDPVTLL-MTATVADAKMAMKEFGIGGIP 126

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +VDE + LKGI+T  D+   F K+ +   VE +  +N   + E T L  A  +L+ H I 
Sbjct: 127 IVDENKTLKGIVTNRDL--RFEKNGSRPIVEIMTKENLVTVAEGTSLQEAEVVLQGHKIE 184

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            L V++   + +G++ F D+ + 
Sbjct: 185 KLPVINHKNELVGLITFRDITKL 207


>gi|256828180|ref|YP_003156908.1| nucleotidyl transferase [Desulfomicrobium baculatum DSM 4028]
 gi|256577356|gb|ACU88492.1| Nucleotidyl transferase [Desulfomicrobium baculatum DSM 4028]
          Length = 355

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
           L+ I   + DAI  L+      V VVDE  KL G +T+GDI R   + L+  + +E ++ 
Sbjct: 13  LLSINSTIQDAIQSLNASTLQIVMVVDEHGKLLGTVTDGDIRRGLLRGLDLRTGIEQILF 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            NP V   +    + + L+R + +  + VVD   K +G+  + D++
Sbjct: 73  TNPLVAPPEMSREMILHLMRVNRLLQMPVVDGQHKVVGLHLWNDII 118


>gi|257079665|ref|ZP_05574026.1| transcriptional regulator [Enterococcus faecalis JH1]
 gi|256987695|gb|EEU74997.1| transcriptional regulator [Enterococcus faecalis JH1]
          Length = 284

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 135 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT +  SV+   +DIVL      E  P   A T S + QL + 
Sbjct: 195 ASTLADLAKQQGIPIISITQDENSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 253

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 254 DVLFFAYA-AKNYKE 267


>gi|86132801|ref|ZP_01051393.1| IMP dehydrogenase [Dokdonia donghaensis MED134]
 gi|85816755|gb|EAQ37941.1| IMP dehydrogenase [Dokdonia donghaensis MED134]
          Length = 490

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 72/169 (42%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+ +     E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAIAQ-----EGGIGVLHKNMTIDEQAIKVRKVKRAESGMIIDP 101

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VD+  KL GI+T  D+   F KD N   V +VM 
Sbjct: 102 VTLPLKSLVSDAKAAMREHSIGGIPIVDDNGKLIGIVTNRDL--RFEKD-NDRPVSEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N     E T L  A ++L+ H I  L VV      +G++ F D+ + 
Sbjct: 159 SENLVTAAEGTSLQQAEEILQNHKIEKLPVVTGDNTLVGLITFRDITKL 207


>gi|153809073|ref|ZP_01961741.1| hypothetical protein BACCAC_03381 [Bacteroides caccae ATCC 43185]
 gi|149128406|gb|EDM19625.1| hypothetical protein BACCAC_03381 [Bacteroides caccae ATCC 43185]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVRDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|197286643|ref|YP_002152515.1| RpiR family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227355166|ref|ZP_03839577.1| RpiR family transcriptional regulator [Proteus mirabilis ATCC
           29906]
 gi|194684130|emb|CAR45545.1| RpiR-family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227164953|gb|EEI49800.1| RpiR family transcriptional regulator [Proteus mirabilis ATCC
           29906]
          Length = 286

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 5/148 (3%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   +++I     RV I GIG SG +   L+  L   G  +              M++ 
Sbjct: 124 QFEQVIQQIDD-ASRVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSP 182

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCP 170
            DL IV+S+SG   ++      A++    +IAIT E  S +   AD +L T+  E E   
Sbjct: 183 RDLQIVISYSGKRKDMLVAASVAKKQGAKIIAITGEKHSPLGLMADYILETIADEGEWRS 242

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
             ++  T+   Q  I D + +ALL+ R+
Sbjct: 243 AAISSRTA---QNTITDLIFMALLKKRD 267


>gi|298480172|ref|ZP_06998370.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
 gi|298273453|gb|EFI15016.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|146303065|ref|YP_001190381.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701315|gb|ABP94457.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 141

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           V+ G P+I A+ +++    G V +  +G KL GIITE D+ R   +   LN    E   +
Sbjct: 16  VERGTPVIKAVELMASHNMGSVIITKDG-KLAGIITERDVIRGIARGISLNQPVEEFGTM 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+   + ED  +  A++ + + N+  L+VVD      G++   D++R
Sbjct: 75  KDLVTVREDDTVYTAVKKMAERNLRHLIVVDRDGNLKGVISVRDIIR 121


>gi|56477198|ref|YP_158787.1| protein stimulating phenylphosphate synthetase activity
           [Aromatoleum aromaticum EbN1]
 gi|56313241|emb|CAI07886.1| protein stimulating phenylphosphate synthetase activity
           [Aromatoleum aromaticum EbN1]
          Length = 222

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 52/104 (50%), Gaps = 14/104 (13%)

Query: 231 PLVKIGCPLI-DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------- 282
           P V  G  L+ +A  ILSE     + VVD+G +L+G+IT     R  H  L T       
Sbjct: 11  PTVLTGDTLLSEAKRILSEANVHALPVVDDG-RLRGLITRAGCLRAAHAALRTQDTDELS 69

Query: 283 -----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                + V+D+M++NP  I  D  +   +Q+ ++H +  L V+D
Sbjct: 70  YFSNHVKVKDIMVRNPATIDADDTMEHCLQIGQEHGVGQLPVMD 113


>gi|34499485|ref|NP_903700.1| sugar-phosphate nucleotide transferase [Chromobacterium violaceum
           ATCC 12472]
 gi|34105335|gb|AAQ61690.1| probable sugar-phosphate nucleotide transferase [Chromobacterium
           violaceum ATCC 12472]
          Length = 348

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 57/108 (52%), Gaps = 2/108 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVM 289
           L+    P   A+ +L +     V VVDE ++L G +T+GD+ R   + +N  T +V D+M
Sbjct: 9   LLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFMTAAVADIM 68

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P+V L          L+ QH++  + ++D   + +G+  + ++L+
Sbjct: 69  HREPRVALASASREQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQ 116


>gi|299142783|ref|ZP_07035912.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
 gi|298575812|gb|EFI47689.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
          Length = 494

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + D + ++ +   G + VVD+  KL GI+T  D+   F + ++   +++VM K 
Sbjct: 105 IRRGSTVKDTLELMHDYHIGGIPVVDDDNKLVGIVTNRDL--RFERRMDK-KIDEVMTKE 161

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   + T L  A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITK 207


>gi|294780823|ref|ZP_06746178.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           PC1.1]
 gi|307270808|ref|ZP_07552097.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|294452068|gb|EFG20515.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           PC1.1]
 gi|306512840|gb|EFM81483.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|323481422|gb|ADX80861.1| helix-turn-helix domain, RpiR family protein [Enterococcus faecalis
           62]
 gi|329572208|gb|EGG53868.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1467]
          Length = 282

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 2/135 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +   +       G   F           LG   +  + IV+S SG++ E
Sbjct: 133 IFVYGLGASSLVAQDIYQKFTRLGRTVFTTLDHHLFASMLGSTEKPSVFIVISNSGTNKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              +   A++  IP+I+IT +  SV+   +DIVL      E  P   A T S + QL + 
Sbjct: 193 ASTLADLAKQQGIPIISITQDENSVIGEKSDIVLQ-TSSGEDVPLRSAATVSLVAQLYVV 251

Query: 187 DALAIALLESRNFSE 201
           D L  A   ++N+ E
Sbjct: 252 DVLFFAYA-AKNYKE 265


>gi|237714318|ref|ZP_04544799.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
 gi|262408151|ref|ZP_06084698.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
 gi|294645123|ref|ZP_06722848.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
           2a]
 gi|294809725|ref|ZP_06768412.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           SD CC 1b]
 gi|229445482|gb|EEO51273.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
 gi|262353703|gb|EEZ02796.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
 gi|292639547|gb|EFF57840.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
           2a]
 gi|294443059|gb|EFG11839.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           SD CC 1b]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|148990520|ref|ZP_01821658.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|221232007|ref|YP_002511159.1| phosphosugar-binding transcriptional regulator [Streptococcus
           pneumoniae ATCC 700669]
 gi|147924236|gb|EDK75333.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|220674467|emb|CAR69027.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus pneumoniae ATCC 700669]
 gi|301794383|emb|CBW36814.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus pneumoniae INV104]
 gi|332203167|gb|EGJ17235.1| SIS domain protein [Streptococcus pneumoniae GA47901]
          Length = 203

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 2/121 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   A++ I+    ++++ G+G SG+   +  S+L   G  S  V           ++  
Sbjct: 41  QIELAIKLIRE-ANQILMIGVGSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKD 99

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DLII  S SGS+ E++  L  A+R ++ +I+IT+ +   +A  +D VL L  + ES   
Sbjct: 100 NDLIIAFSLSGSTKEVEETLLNAKRKNVKIISITNYSSRNIAKLSDCVL-LTSKKESYLE 158

Query: 172 G 172
           G
Sbjct: 159 G 159


>gi|295088063|emb|CBK69586.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           XB1A]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|160882389|ref|ZP_02063392.1| hypothetical protein BACOVA_00338 [Bacteroides ovatus ATCC 8483]
 gi|237719062|ref|ZP_04549543.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
 gi|293369501|ref|ZP_06616080.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
           3f]
 gi|299148145|ref|ZP_07041207.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
 gi|156112202|gb|EDO13947.1| hypothetical protein BACOVA_00338 [Bacteroides ovatus ATCC 8483]
 gi|229451441|gb|EEO57232.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
 gi|292635386|gb|EFF53899.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
           3f]
 gi|298512906|gb|EFI36793.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|260172004|ref|ZP_05758416.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D2]
 gi|315920317|ref|ZP_07916557.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694192|gb|EFS31027.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 492

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 59/107 (55%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ VM   
Sbjct: 104 IKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDL--RFERDMAK-HIDLVMTPK 160

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++   + T L  A Q+L++H I  L +V    K IG+V + D+ +
Sbjct: 161 ERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITK 207


>gi|11498786|ref|NP_070015.1| hypothetical protein AF1186 [Archaeoglobus fulgidus DSM 4304]
 gi|2649397|gb|AAB90057.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 491

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  I+ +K    + VV+EG +L GIIT  DI +   ++    +V+ +M +N      D 
Sbjct: 393 EAARIMMDKGINHIPVVEEG-RLVGIITSWDIAKAVARNRKG-AVKSIMTRNVIYTHPDE 450

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + VA + + Q+NIS L VVD  ++ +GIV   DL + 
Sbjct: 451 PVEVAARKMEQNNISALPVVDSRKRVLGIVTSEDLSKL 488


>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
 gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
          Length = 236

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 29/148 (19%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D M   + + +VK    + +A+  L EKR     V+D+  +L G++++ D+         
Sbjct: 79  DFMTKKEGLYVVKANTTVDEALEALVEKRITGFPVIDDDWRLVGVVSDYDLLALDSISGG 138

Query: 273 -------FRNFHKDLNTLS-------------VEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                  F N      T +             V D+M  NP V+ E T L  A++LL + 
Sbjct: 139 CQNDTNLFPNVDSSWKTFNELQKLLIKNNGKLVGDLMTPNPLVVYETTNLEDAVRLLLET 198

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               L VVDD  K +GI+   D++R  +
Sbjct: 199 KYRRLPVVDDDGKLVGIITRGDIVRAAL 226


>gi|167565691|ref|ZP_02358607.1| HPP family protein [Burkholderia oklahomensis EO147]
          Length = 391

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 1/77 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  D+M +    I  DT L  AM LL +H I  L VV
Sbjct: 224 EDLESLLRETEL-RAYARTFDELSCADIMTRPAISIAPDTPLPAAMTLLDRHRIKALPVV 282

Query: 321 DDCQKAIGIVHFLDLLR 337
           D   + +GIV   DL R
Sbjct: 283 DANARVVGIVTRADLSR 299


>gi|15921048|ref|NP_376717.1| hypothetical protein ST0813 [Sulfolobus tokodaii str. 7]
 gi|15621832|dbj|BAB65826.1| 274aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 274

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 58/101 (57%), Gaps = 2/101 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVIL 297
           ++DA+T++  + FG + VV+E +K+ GI+TE ++   F  DL+ L SV+  M K    + 
Sbjct: 94  VLDALTLMVARNFGSLPVVNEVKKVTGIVTEREMLLIFQ-DLDQLFSVKKFMTKRVTSVY 152

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ED  +  A +L+ +     L V+++  + IGI+   D L+ 
Sbjct: 153 EDVSVFDATKLMIKRGFRRLPVINESGEVIGIITAADSLKL 193



 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 24/123 (19%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-----------------EGDIF 273
           P + +   L++A   ++EK  G V V  E  ++KGII+                  GDIF
Sbjct: 13  PTISVSSKLLEAFKKVNEKGIGRVIV--EDNEIKGIISTRDLLNYVVERCEKGCDRGDIF 70

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               KD     V+ VM  NP  + E+  +  A+ L+   N   L VV++ +K  GIV   
Sbjct: 71  ALVDKD-----VKYVMTPNPVYVYENDDVLDALTLMVARNFGSLPVVNEVKKVTGIVTER 125

Query: 334 DLL 336
           ++L
Sbjct: 126 EML 128


>gi|89094624|ref|ZP_01167561.1| hypothetical protein MED92_00325 [Oceanospirillum sp. MED92]
 gi|89081094|gb|EAR60329.1| hypothetical protein MED92_00325 [Oceanospirillum sp. MED92]
          Length = 1217

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 60/111 (54%), Gaps = 3/111 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVE 286
           S+  ++   PL  A+ +++   F C+  + EG+ + G+ITE D+ R   K  D ++++++
Sbjct: 150 SVATLEANLPLSQAVDLMNTTHFSCIVAMSEGKPV-GVITERDVVRFAIKGVDSSSVAIQ 208

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM    +++L D  L  A + +    I  L+VVDD     GI+   D+ +
Sbjct: 209 EVMSSPLQIVLPDMPLQTASRRMELEKIRRLIVVDDKGVLAGILTRHDIAK 259


>gi|270291609|ref|ZP_06197829.1| RpiR family transcriptional regulator [Pediococcus acidilactici
           7_4]
 gi|270279928|gb|EFA25766.1| RpiR family transcriptional regulator [Pediococcus acidilactici
           7_4]
          Length = 270

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 58  EKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E ++ IK   R+ + G+G SG+   +L+  L   G  +F    +   +    ++  DDL+
Sbjct: 112 EAVQLIKNAPRIFVFGLGSSGYNAQELSQRLLRMGINAFAPADSHTMYITSSIMQSDDLV 171

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           IVLS SG+S E+      A+   + +IAIT+ + S +A  +D
Sbjct: 172 IVLSVSGNSAEVNEATKLAKEHQLKVIAITAFDDSPLATMSD 213


>gi|304384563|ref|ZP_07366909.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
 gi|304328757|gb|EFL95977.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
          Length = 270

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 58  EKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E ++ IK   R+ + G+G SG+   +L+  L   G  +F    +   +    ++  DDL+
Sbjct: 112 EAVQLIKNAPRIFVFGLGSSGYNAQELSQRLLRMGINAFAPADSHTMYITSSIMQSDDLV 171

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           IVLS SG+S E+      A+   + +IAIT+ + S +A  +D
Sbjct: 172 IVLSVSGNSAEVNEATKLAKEHQLKVIAITAFDDSPLATMSD 213


>gi|291167093|gb|EFE29139.1| inosine-5'-monophosphate dehydrogenase [Filifactor alocis ATCC
           35896]
          Length = 487

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++   R   V +VDE +KL GI+T  DI   F +D +    E +  +N    LE
Sbjct: 106 LRDADDLMGRYRISGVPIVDENKKLIGILTNRDI--RFEQDFSKKIEEAMTSENLITALE 163

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              L  A ++LRQH I  L +VD      G++   D+
Sbjct: 164 GVKLEEAQEILRQHKIEKLPIVDKNYILKGLITIKDI 200


>gi|302418246|ref|XP_003006954.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
 gi|261354556|gb|EEY16984.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
          Length = 750

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K G  + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 179 IKPGTTVAEAAQLMAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAGMKPTHITIAEIM 238

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 239 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 279


>gi|282878159|ref|ZP_06286956.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccalis ATCC
           35310]
 gi|281299737|gb|EFA92109.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccalis ATCC
           35310]
          Length = 494

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ ++     G + VVDE   L GI+T  D+   F + L+  ++++VM  +
Sbjct: 105 IRRGKTVRDALEMMRSYHIGGIPVVDEDGHLVGIVTNRDL--RFERRLDK-AIDEVMTHE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N       T L  A Q+L++H I  L VVD   K +G++ + D+ +
Sbjct: 162 NLVTTHARTDLAAAAQILQEHKIEKLPVVDANNKLVGLITYKDITK 207


>gi|291295216|ref|YP_003506614.1| inosine-5'-monophosphate dehydrogenase [Meiothermus ruber DSM 1279]
 gi|290470175|gb|ADD27594.1| inosine-5'-monophosphate dehydrogenase [Meiothermus ruber DSM 1279]
          Length = 504

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL------SVEDVMIKN 292
           L DA  ++ E + G + VVD   KL G++T  D+   F +D+  L       VE ++   
Sbjct: 117 LEDAERLMREFKIGGLPVVDFYGKLLGLVTNRDL--RFERDMGRLVAEVMTPVERLVTAP 174

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  ILE+     A QLLRQH I  L +VD   +  G++   DL +
Sbjct: 175 PGTILEE-----AEQLLRQHKIEKLPLVDHEGRLRGLLTLKDLTK 214


>gi|113969399|ref|YP_733192.1| CBS domain-containing protein [Shewanella sp. MR-4]
 gi|113884083|gb|ABI38135.1| CBS domain containing protein [Shewanella sp. MR-4]
          Length = 143

 Score = 48.1 bits (113), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 16/129 (12%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
           +D+M +   +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R      
Sbjct: 6   ADIMRT--RVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRAISPNL 62

Query: 278 -------KDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                  KDL TL   V  VM +NP  +     L  A   L +HNI  L V+D+    +G
Sbjct: 63  GSSAETAKDLETLQKRVHQVMTRNPVTVAPHVSLDAATHTLLEHNIGCLPVLDN-GDLVG 121

Query: 329 IVHFLDLLR 337
           IV + DLLR
Sbjct: 122 IVTWKDLLR 130


>gi|289579767|ref|YP_003478233.1| CBS domain containing membrane protein [Natrialba magadii ATCC
           43099]
 gi|289529320|gb|ADD03671.1| CBS domain containing membrane protein [Natrialba magadii ATCC
           43099]
          Length = 398

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 48/87 (55%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V E   L G+IT+  I     ++L+TL+VED+   +P  + ED  +  A+  LR+H 
Sbjct: 111 VAPVFENDDLWGVITDDAILEAVLENLDTLTVEDIYTSDPVTLQEDDGIGKAINHLREHG 170

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           IS + V++D     G+V   D+  F I
Sbjct: 171 ISRIPVLNDNGYLTGVVTTHDIADFVI 197


>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
 gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 23/119 (19%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL----- 283
            I +LS +    V VVD   ++ G ++E D+ +             +F  D N L     
Sbjct: 23  VIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPDTNQLIRNVV 82

Query: 284 -----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 V + M K P V+ ED  L VA   L +H    L VVD+  + +GIV  +D+LR
Sbjct: 83  KIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILR 141


>gi|332878101|ref|ZP_08445831.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684063|gb|EGJ56930.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 492

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           +K G  + DA+ ++SE   G + VVD+  KL GI+T  D+   F ++ +   +++VM  +
Sbjct: 105 IKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDL--RFEQNPDR-KIDEVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N     + T L+ A ++L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDITK 207


>gi|257067030|ref|YP_003153286.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
 gi|256798910|gb|ACV29565.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
          Length = 279

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V + GIG SG +       L  +G  +F+   A  +   L  I  DDL+I ++++  S E
Sbjct: 132 VYLAGIGSSGLVCEDFLYKLQRSGKKAFYETDAHTNLSLLTNIKEDDLLICITYTALSKE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           +     YA+     LI+IT   +  +A  +DI++ +P+  +   +G
Sbjct: 192 VLIAAEYAKTIGAKLISITKAGRGKLANMSDILIPIPEIEKKMRYG 237


>gi|146319587|ref|YP_001199299.1| transcriptional regulator [Streptococcus suis 05ZYH33]
 gi|146321787|ref|YP_001201498.1| transcriptional regulator [Streptococcus suis 98HAH33]
 gi|253752588|ref|YP_003025729.1| RpiR family regulatory protein [Streptococcus suis SC84]
 gi|253754414|ref|YP_003027555.1| RpiR family transcriptional regulator [Streptococcus suis P1/7]
 gi|253756348|ref|YP_003029488.1| RpiR family regulatory protein [Streptococcus suis BM407]
 gi|145690393|gb|ABP90899.1| Transcriptional regulator [Streptococcus suis 05ZYH33]
 gi|145692593|gb|ABP93098.1| Transcriptional regulator [Streptococcus suis 98HAH33]
 gi|251816877|emb|CAZ52525.1| RpiR family regulatory protein [Streptococcus suis SC84]
 gi|251818812|emb|CAZ56653.1| RpiR family regulatory protein [Streptococcus suis BM407]
 gi|251820660|emb|CAR47421.1| RpiR family regulatory protein [Streptococcus suis P1/7]
 gi|292559202|gb|ADE32203.1| transcriptional regulator [Streptococcus suis GZ1]
 gi|319759002|gb|ADV70944.1| transcriptional regulator [Streptococcus suis JS14]
          Length = 275

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 7/160 (4%)

Query: 40  SLESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           S+  S Q  +SF    +   AV+ +++   R+ + G+G SG + S     L+  G    F
Sbjct: 98  SITISNQQTVSFLNLEELEAAVKLLQS-ASRIYLFGVGASGIVCSDFYYKLSRIGKTCIF 156

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                    ++      DL I +S+SG + E+   L +A+   +  I IT   K+ +A  
Sbjct: 157 AQDTHIQMANIATAGNGDLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           ADI   +P+       G    TS    L + D L +AL++
Sbjct: 217 ADITFRIPRHEHELRVG--AITSRSNSLFLTDLLYLALIQ 254


>gi|330996062|ref|ZP_08319956.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574059|gb|EGG55637.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
           YIT 11841]
          Length = 492

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 61/106 (57%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           +K G  + DA+ ++SE   G + VVD+  KL GI+T  D+   F ++ +   +++VM  +
Sbjct: 105 IKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDL--RFEQNPDR-KIDEVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N     + T L+ A ++L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDITK 207


>gi|15615238|ref|NP_243541.1| RpiR transcriptional regulator [Bacillus halodurans C-125]
 gi|10175296|dbj|BAB06394.1| transcriptional regulator (RpiR family) [Bacillus halodurans C-125]
          Length = 287

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 5/158 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + +LE ++Q      F  AV+ +   + R+   G G SG I          TG PS 
Sbjct: 108 KSNIRTLEDTMQVLDVESFKRAVDYLLHAR-RIEFYGNGGSGVIALDAHHKFLRTGIPSA 166

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
             H +         +T+ D+ + +S SG++ +L   L  A+   +  I IT+  K+ ++ 
Sbjct: 167 AYHDSHFQVMSASQLTKQDVAVFISHSGTNRDLLQALEVAKSHQVKTIGITTYGKTPLSK 226

Query: 155 HADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             DI L T+ +E E     LA   S + QL+I DAL +
Sbjct: 227 EVDIALYTVSQETEYRSEALA---SRLAQLSIIDALYV 261


>gi|418352|sp|P32987|YBP3_ACIAM RecName: Full=Uncharacterized 17.7 kDa protein in bps2 3'region;
           AltName: Full=ORF3
 gi|40783|emb|CAA45529.1| unnamed protein product [Acidianus ambivalens]
          Length = 164

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMI 290
           +VK    + +A   + E   G + V+D   ++ GIITE DI +   ++D+++  VE  M 
Sbjct: 15  VVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVKAASNRDIDS-PVEKYMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+ K + EDT +T A+ ++  +    L ++    K  GIV   DL R
Sbjct: 74  KDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLAR 120


>gi|154248815|ref|YP_001409640.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154152751|gb|ABS59983.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
           Rt17-B1]
          Length = 508

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 60/116 (51%), Gaps = 14/116 (12%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V+H  D+I          +A+ +++E + G   VVD+   L G++T  D+   F  D++ 
Sbjct: 120 VIHPNDTI---------FNALKLMAEYKIGGFPVVDDEGYLVGLLTNRDV--RFESDVSK 168

Query: 283 LSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V+++M    K++  L    L  A Q+L +H I  L +VDD  K IG++   D+L
Sbjct: 169 -KVKELMTPREKLVVALPGISLEKAKQILHEHRIEKLPIVDDKNKLIGLITIKDVL 223


>gi|295132735|ref|YP_003583411.1| IMP dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294980750|gb|ADF51215.1| IMP dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 490

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+       E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAMAR-----EGGIGVLHKNMTMEQQALKVRKVKRAESGMIIDP 101

Query: 235 IGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P+     DA  ++ E   G + +VDE  KL GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPISSTVKDAKDLMKEHSIGGIPIVDEEGKLIGIVTNRDL--RFEKN-NQRPIAEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N   + E T L  A  +L+++ I  L VV+   K +G++ F D+ + 
Sbjct: 159 SENLVTVAEGTSLEQAEDILQENKIEKLPVVNKEDKLVGLITFRDITKL 207


>gi|317121307|ref|YP_004101310.1| Cl- channel voltage-gated family protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591287|gb|ADU50583.1| Cl- channel voltage-gated family protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 639

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 55/112 (49%), Gaps = 7/112 (6%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----TLSVED 287
           +V+   PL   I ++   R     VVDE   L G+IT  DI RN + D       ++VE 
Sbjct: 504 VVRRDWPLARVIRVMQSSRHNGFPVVDENGHLVGVITLADI-RNTYPDEPERRLAVAVEQ 562

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLR 337
            M  NP V   D  L   ++ L ++++  L VV   D ++ +G++   D+++
Sbjct: 563 AMTPNPVVAYPDESLAQVLERLGRYDVGRLPVVARGDPRQLLGVITRSDVIK 614


>gi|145607543|ref|XP_361856.2| hypothetical protein MGG_04330 [Magnaporthe oryzae 70-15]
 gi|145015069|gb|EDJ99637.1| hypothetical protein MGG_04330 [Magnaporthe oryzae 70-15]
          Length = 640

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +K G  + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L    +++ ++M
Sbjct: 55  IKPGTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKATNVTIAEIM 114

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 115 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 155


>gi|126179463|ref|YP_001047428.1| hypothetical protein Memar_1517 [Methanoculleus marisnigri JR1]
 gi|125862257|gb|ABN57446.1| protein of unknown function DUF39 [Methanoculleus marisnigri JR1]
          Length = 502

 Score = 47.8 bits (112), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+D    L GIIT  D+ +    D     V+D+M +N      D  + VA + L Q+NIS
Sbjct: 413 VLDGNGTLVGIITTYDVSKAVVTDGKLRQVKDIMTRNVIKTTPDEPVDVAARKLEQNNIS 472

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L VVD   + +GI+  +DL
Sbjct: 473 ALPVVDATNRVVGILSAIDL 492


>gi|119387398|ref|YP_918432.1| RpiR family transcriptional regulator [Paracoccus denitrificans
           PD1222]
 gi|119377973|gb|ABL72736.1| transcriptional regulator, RpiR family [Paracoccus denitrificans
           PD1222]
          Length = 336

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           R+ + GIG + HI +  A+ L   G     +    A   D L  +   D +++L++    
Sbjct: 178 RIFVFGIGPTAHIAAYFAARLRRKGRQQQVIDRTGAGLADQLLELAPGDAVVMLAYGSLY 237

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
            E  A L  ARR  +P+I I+   +S ++  A +VL +P+
Sbjct: 238 KEANATLAEARRLRLPVILISDSAQSELSSRAQVVLAVPR 277


>gi|325568966|ref|ZP_08145259.1| CBS domain protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158004|gb|EGC70160.1| CBS domain protein [Enterococcus casseliflavus ATCC 12755]
          Length = 215

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 14/111 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLS 284
            P+ DAI ++ +     + VVD+G KL G+ITEG I                +  LN  +
Sbjct: 18  TPIFDAIDVMKQHDIHRLPVVDDG-KLVGLITEGTIAEATPSKATSLSVYEMNYLLNKTT 76

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M+K    I  + LL  A+ ++R  N+ VL V+DD    +GI+   D+
Sbjct: 77  VADIMLKKVTTIEPEALLEDAISVMRSENVGVLPVMDD-DALVGIITNNDI 126


>gi|302348912|ref|YP_003816550.1| Inosine-5'-monophosphate dehydrogenase related protein [Acidilobus
           saccharovorans 345-15]
 gi|302329324|gb|ADL19519.1| Inosine-5'-monophosphate dehydrogenase related protein [Acidilobus
           saccharovorans 345-15]
          Length = 259

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +K  G + VV+E +K  G+IT  DI       N+++ L+ + V + M KN   I ++  L
Sbjct: 3   KKDIGRLVVVNESEKPVGVITMTDIIDSLYGSNYYRPLDDIKVSEAMSKNIITIDQNKSL 62

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A  L+ +H +  L VVD   K  GI+   D++R
Sbjct: 63  RTAASLMMRHKVGGLPVVDKDGKLAGIITRTDVVR 97


>gi|167827983|ref|ZP_02459454.1| HPP family protein [Burkholderia pseudomallei 9]
          Length = 201

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L+ ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VV
Sbjct: 34  EDLESLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVV 92

Query: 321 DDCQKAIGIVHFLDL 335
           D   + +GIV   DL
Sbjct: 93  DADARVVGIVTRADL 107


>gi|310791950|gb|EFQ27477.1| hypothetical protein GLRG_01972 [Glomerella graminicola M1.001]
          Length = 682

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K G  + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +  + +++ ++M
Sbjct: 112 IKPGTSVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKPSHITIAEIM 171

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 172 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 212


>gi|293400324|ref|ZP_06644470.1| CBS domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306724|gb|EFE47967.1| CBS domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 215

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--------DLNTL- 283
           + +   + D + I+SEK    + VV  G+KL G++TEG I +            +LN L 
Sbjct: 14  IDVNAKISDVVDIMSEKNLHRIPVV-SGKKLVGLVTEGMISKKGASKATSLSIYELNYLL 72

Query: 284 ---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-------HFL 333
              SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+        FL
Sbjct: 73  SKTSVDAIMIRDVITIHEDRFLEDAALLMFKHDIGCLPVVNDDNEVVGILTSNDVLSSFL 132

Query: 334 DLLRF 338
           D+L +
Sbjct: 133 DILGY 137


>gi|304315355|ref|YP_003850502.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588814|gb|ADL59189.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 269

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-- 301
           +IL ++ F CV VV EG+KL+G+IT GD+  N     + L    +M K PKVIL   +  
Sbjct: 25  SILRDEDFRCVPVV-EGEKLRGLITRGDVL-NITATKSNLEARGIMEK-PKVILTPEMDA 81

Query: 302 LTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           +  A  LL+   I   +V   D  K +GI+  +DL+
Sbjct: 82  MRAASDLLKVGEIQAPVVESTDSMKLVGILSAIDLI 117


>gi|323703226|ref|ZP_08114878.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Desulfotomaculum nigrificans DSM 574]
 gi|323531782|gb|EGB21669.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Desulfotomaculum nigrificans DSM 574]
          Length = 609

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 23/198 (11%)

Query: 40  SLESSLQGELSF--------QFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLAS 88
           +L  +L+G +S         + +   E+IK IK ++VIT  G + H   +G  +   L  
Sbjct: 262 ALRDTLKGRISHKGDKVILEEINMTPEQIKGIK-KIVITACGTAYHAGLVGKYVIEQLVR 320

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P     A+E  + D  +I +D L++V+S SG + +  A L  ARR    ++A+T+  
Sbjct: 321 I--PVEVDIASEFRYRD-PIIDKDTLVVVVSQSGETADTLAALREARRRGARVVAVTNVI 377

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF--SENDFYV 206
            S VA  AD ++     PE     +A T +   QL     LA+ L + RN   + N   +
Sbjct: 378 ASSVAREADDIIYTWAGPEIS---VASTKAYTTQLVAMYLLALYLAQHRNTLAAGNIKEI 434

Query: 207 LHPGGKLGTLFVCASDVM 224
           L    +L  L+V A DV+
Sbjct: 435 L---DELKELYVKAQDVL 449


>gi|159905697|ref|YP_001549359.1| hypothetical protein MmarC6_1314 [Methanococcus maripaludis C6]
 gi|159887190|gb|ABX02127.1| protein of unknown function DUF39 [Methanococcus maripaludis C6]
          Length = 513

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +A  +L E     + +VDE  KL GIIT  DI +   +D +++S  ++M         
Sbjct: 407 ITEASKVLIENNINHLPIVDENNKLSGIITSWDIAKAMAQDKHSIS--EIMTTYIVSATP 464

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 465 DETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504


>gi|322708062|gb|EFY99639.1| ribosomal protein subunit S4 [Metarhizium anisopliae ARSEF 23]
          Length = 666

 Score = 47.8 bits (112), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR---NFHKDLNTLSVEDV 288
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     HK  N +++ D+
Sbjct: 95  IKPQTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAAN-ITIADI 153

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 154 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 195


>gi|307153895|ref|YP_003889279.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7822]
 gi|306984123|gb|ADN16004.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7822]
          Length = 908

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE  +L GII+  DI    H   +   V+  M +NPK I  DT L     
Sbjct: 347 RYGHSGLSVVDENDQLVGIISRRDIDLALHHGFSHAPVKGYMTRNPKTITPDTSLPEIED 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +++  L VV++ Q  +GIV   D+LR
Sbjct: 407 LMVTYDLGRLPVVENGQ-LMGIVTRTDVLR 435


>gi|256843747|ref|ZP_05549235.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256615167|gb|EEU20368.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
          Length = 281

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++IV S+SG + 
Sbjct: 132 QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILIVFSYSGLTQ 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G
Sbjct: 192 EPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYG 238


>gi|213422782|ref|ZP_03355825.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 39

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/36 (58%), Positives = 27/36 (75%)

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 1   CPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 36


>gi|254166877|ref|ZP_04873731.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|289596315|ref|YP_003483011.1| sugar isomerase (SIS) [Aciduliprofundum boonei T469]
 gi|197624487|gb|EDY37048.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|289534102|gb|ADD08449.1| sugar isomerase (SIS) [Aciduliprofundum boonei T469]
          Length = 178

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 81/175 (46%), Gaps = 14/175 (8%)

Query: 38  LSSLESSLQG-ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           L S+E SL   ++S   H  V+ I   K ++ + G G+SG +G   A  L   G  ++F+
Sbjct: 10  LESIEKSLNSIDVSLVNH-GVDMITEAK-QIFVYGSGRSGLVGKFFAMRLVQLGLVAYFI 67

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                      ++ + DL++++S +G +     +    +R    +IAITS  KS +A HA
Sbjct: 68  GETITP-----VVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAKSPLAKHA 122

Query: 157 DIVLTLPKEPES---CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           D+   +  E E     P G     +A++ L   D++  +L+     +E D    H
Sbjct: 123 DLTFVIRYEKEKGELAPLGTLFEDAAVVFL---DSIISSLMNKLGQTEEDMRRRH 174


>gi|332305652|ref|YP_004433503.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172981|gb|AEE22235.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 753

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 54/102 (52%), Gaps = 6/102 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN-TLSVED 287
           +V+    L DA+  L+E +   + VVD  +KLKG  T+GD FR +    K++N  L V  
Sbjct: 11  IVETQVTLSDALVKLNENKLQILFVVDSQRKLKGAFTDGD-FRRWVLNQKNINIQLPVAQ 69

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            M KN + + ED    + ++ L +  +  L +VD+  K I I
Sbjct: 70  AMNKNCQSVFEDVEHNIVIEHLNE-KVRYLPIVDNNAKLIAI 110


>gi|330506462|ref|YP_004382890.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328927270|gb|AEB67072.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 286

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D +  L +++   + VV +G+ + GIIT  D+ RN  +D   L    +M ++P VI  D 
Sbjct: 24  DVLKTLQDRKVSGLPVVKKGEVV-GIITRSDLLRNREEDQTAL----LMTRDPVVISPDR 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +  A +LL QH I  L VV + ++ +G+V   D++R  
Sbjct: 79  SIVEASKLLIQHKIRRLPVV-EGKELVGLVTVADIVRVA 116


>gi|28896976|ref|NP_796581.1| putative sugar-phosphate nucleotide transferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839585|ref|ZP_01992252.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|260362367|ref|ZP_05775325.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|260897645|ref|ZP_05906141.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|260899575|ref|ZP_05907970.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|28805184|dbj|BAC58465.1| putative sugar-phosphate nucleotide transferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746892|gb|EDM57880.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|308087478|gb|EFO37173.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|308108796|gb|EFO46336.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|308115132|gb|EFO52672.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           K5030]
          Length = 351

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 2/99 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LVK  C L+DA+ I++++    V VVDE   L G++T+GDI R   ++L  T  +  VM 
Sbjct: 9   LVKPACTLLDALEIINDEALRVVLVVDESDSLLGVVTDGDIRRGLLRNLPLTADIAQVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             P     DT     + ++  ++I  + ++D+  K +G+
Sbjct: 69  TTPYTAAIDTPRDELIAIMESNDILSIPLLDNG-KVVGL 106


>gi|332797972|ref|YP_004459472.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
 gi|332695707|gb|AEE95174.1| paired CBS domain protein [Acidianus hospitalis W1]
          Length = 164

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMI 290
           +VK    + +A   + E   G + V+D   ++ GIITE D+ R   ++D++   VE  M 
Sbjct: 15  VVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDVVRAVSNRDIDG-PVEKYMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+ K + EDT +T A+ ++  +    L ++    K  GIV   DL R
Sbjct: 74  KDVKGVTEDTSVTDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLAR 120


>gi|322697495|gb|EFY89274.1| ribosomal protein subunit S4 [Metarhizium acridum CQMa 102]
          Length = 694

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 5/94 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF---HKDLNTLSVEDVMIKNPKVI 296
           +A  +++ KR  CV V D+  ++ GI T  D+ FR     HK  N +++ D+M KNP   
Sbjct: 131 EAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAAN-ITIADIMTKNPLCA 189

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 190 RTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 223


>gi|194017398|ref|ZP_03056010.1| CBS domain transcriptional regulator [Bacillus pumilus ATCC 7061]
 gi|194011266|gb|EDW20836.1| CBS domain transcriptional regulator [Bacillus pumilus ATCC 7061]
          Length = 440

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK +    G   V D+  K+ GI+T  DI  +   D +T  +E VM KNP  +
Sbjct: 208 DKLEKWYEKNYETGHGRFPVADDQMKIHGILTSKDIAGH---DRST-PIEKVMTKNPLTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL VVDD  K IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVVDDYAKLIGMISRQDVLK 304


>gi|227876910|ref|ZP_03995007.1| transcriptional regulator [Lactobacillus crispatus JV-V01]
 gi|256850195|ref|ZP_05555625.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|227863500|gb|EEJ70922.1| transcriptional regulator [Lactobacillus crispatus JV-V01]
 gi|256713167|gb|EEU28158.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
          Length = 281

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++IV S+SG + 
Sbjct: 132 QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILIVFSYSGLTQ 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G
Sbjct: 192 EPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYG 238


>gi|294101968|ref|YP_003553826.1| inosine-5'-monophosphate dehydrogenase [Aminobacterium colombiense
           DSM 12261]
 gi|293616948|gb|ADE57102.1| inosine-5'-monophosphate dehydrogenase [Aminobacterium colombiense
           DSM 12261]
          Length = 491

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 6/98 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILED 299
           A+ ++       V +VD  QKL GIIT  D+    NF +D++ L   + +I  P    E 
Sbjct: 113 AVELMEHYHISGVPIVDHSQKLVGIITNRDLRFVTNFEQDISALMTHERLITGP----EG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  +L +H I  L +VD   K  G++   D+ +
Sbjct: 169 TTLEEAKDILMRHKIEKLPLVDKNNKLKGLITIKDIQK 206


>gi|212634794|ref|YP_002311319.1| cyclic nucleotide-binding protein [Shewanella piezotolerans WP3]
 gi|212556278|gb|ACJ28732.1| Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase
           DUF294 [Shewanella piezotolerans WP3]
          Length = 615

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 4/99 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILE 298
           DA  ++ + R   V V+D  +KL GI+T+ D+  R   + L+ +L+V   M   P  I  
Sbjct: 171 DAARLMRKSRVSSVLVID-NEKLVGILTDKDLRNRVLAEGLDGSLAVHQAMTTTPISIES 229

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++L+  AM L+ +HNI  L VV DC  A GI+   D+LR
Sbjct: 230 NSLVFEAMLLMSEHNIHHLPVV-DCGLAKGIITSTDILR 267


>gi|213407912|ref|XP_002174727.1| CBS domain-containing protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212002774|gb|EEB08434.1| CBS domain-containing protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 655

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-----FHKDLNTLSVEDVMIKNPKV 295
           +A  +++ KR  C+ VVDE Q+L GIIT  D+ R      F  D    +VE  M + P  
Sbjct: 91  EACQLMAAKREECLLVVDEAQQLTGIITSLDVSRKCVGGGF--DPRGSTVESFMTEGPIC 148

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I  DT    A+ L+ +H+   L VV D
Sbjct: 149 ITSDTQFADALALMLEHDRIYLPVVSD 175


>gi|76800670|ref|YP_325678.1| metalloprotease [Natronomonas pharaonis DSM 2160]
 gi|76556535|emb|CAI48106.1| probable metalloprotease/ CBS domain protein [Natronomonas
           pharaonis DSM 2160]
          Length = 396

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 62/120 (51%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V  +DVM   + +  V+    L   +  + E+R     VV EG KL GI+T  DI RN H
Sbjct: 259 VRVADVMTPANEVRTVETTATLDAILDRMFEERHTGYPVV-EGGKLVGIVTLADI-RNVH 316

Query: 278 KDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  + + V DVM ++ + +  DT    AM+ L QH++  L+V D+     G++   DL+
Sbjct: 317 PEKRSETRVADVMSEDLEAVSPDTEAMDAMRQLAQHSVGRLVVTDEFGNLAGLLTRSDLV 376


>gi|14325027|dbj|BAB59953.1| inosine-5 -monophosphate dehydrogenase [Thermoplasma volcanium
           GSS1]
          Length = 355

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P +     +++A+ ++ +     + V D+G KL GII+  DI +   K  D++ L    +
Sbjct: 66  PTLSADDDVLEAVRLIKDTGLSALPVFDKG-KLVGIISRTDIIKRIDKISDISNLRAFQI 124

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +P  + ED  +  A   LRQ N   + VVD+ ++ +GIV   D+L
Sbjct: 125 MSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKLNDIL 172


>gi|88803057|ref|ZP_01118584.1| putative inosine-5'-monophosphate dehydrogenase [Polaribacter
           irgensii 23-P]
 gi|88781915|gb|EAR13093.1| putative inosine-5'-monophosphate dehydrogenase [Polaribacter
           irgensii 23-P]
          Length = 491

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/168 (28%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M      A+AIA+       E    VLH    +         V  +   + L  
Sbjct: 47  PIASAAMDTVTESAMAIAIAR-----EGGIGVLHKNMTIAQQAQEVRRVKRAESGMILDP 101

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VD+   LKGI+T  D+ R  H+  NT  + +VM 
Sbjct: 102 VTLPLTATIADAKANMKEHGIGGIPIVDDQGILKGIVTNRDL-RFEHE--NTRPIIEVMT 158

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N       T L+ A ++L+ + I  L++VDD  K +G++ F D+ +
Sbjct: 159 SVNLVTAAVGTSLSDAEKILQNYKIEKLLIVDDAYKLMGLITFRDITK 206


>gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
 gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
          Length = 1086

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L  N +++ ++M
Sbjct: 110 IKPQTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKPNNVTIAEIM 169

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 170 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 210


>gi|15669417|ref|NP_248227.1| hypothetical protein MJ_1232 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496164|sp|Q58629|Y1232_METJA RecName: Full=Uncharacterized protein MJ1232
 gi|1591864|gb|AAB99237.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 296

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 16/123 (13%)

Query: 229 SIPLVKIG-------------CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           SIP +K+G             C L +   + +EK      VVD   KL G+I+  DI  N
Sbjct: 166 SIPNIKVGDVGIKEVWTINPNCTLRETAKLFAEKYISGAPVVD-NDKLVGVISLHDIAEN 224

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D     V++VM ++   I +D  +  A++++ ++N+  L++VDD  K +GI+   D+
Sbjct: 225 I--DNIDKKVKEVMRRDVITIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDI 282

Query: 336 LRF 338
           L+ 
Sbjct: 283 LKI 285


>gi|13541628|ref|NP_111316.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
          Length = 361

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
           P +     +++A+ ++ +     + V D+G KL GII+  DI +   K  D++ L    +
Sbjct: 72  PTLSADDDVLEAVRLIKDTGLSALPVFDKG-KLVGIISRTDIIKRIDKISDISNLRAFQI 130

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +P  + ED  +  A   LRQ N   + VVD+ ++ +GIV   D+L
Sbjct: 131 MSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKLNDIL 178


>gi|148981450|ref|ZP_01816416.1| putative sugar isomerase SIS-domain protein [Vibrionales bacterium
           SWAT-3]
 gi|145960872|gb|EDK26203.1| putative sugar isomerase SIS-domain protein [Vibrionales bacterium
           SWAT-3]
          Length = 63

 Score = 47.4 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 21/48 (43%), Positives = 32/48 (66%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           E+CP  L PTT+  + LAI DA+AI+++E   F++  + + H GG LG
Sbjct: 6   EACPLDLTPTTTIAVMLAISDAIAISVMEVNEFTKEQYGLRHHGGYLG 53


>gi|150399420|ref|YP_001323187.1| hypothetical protein Mevan_0669 [Methanococcus vannielii SB]
 gi|150012123|gb|ABR54575.1| protein of unknown function DUF39 [Methanococcus vannielii SB]
          Length = 513

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +A  IL E     + +VDE + L GIIT  DI +   +D+ ++S  ++M K+      
Sbjct: 407 ITEASRILIENNINHLPIVDEKEMLSGIITSWDIAKAMAQDIGSIS--EIMTKSVLCATP 464

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  + +A + + ++NIS L +VD     +G+V   D+ + 
Sbjct: 465 DETIDMAARKMSRNNISGLPIVDSNNMVVGVVSAEDISKL 504


>gi|330813887|ref|YP_004358126.1| inosine-5'-monophosphate dehydrogenase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486982|gb|AEA81387.1| inosine-5'-monophosphate dehydrogenase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 485

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI ++S  +   + VVD  + L GIIT  D+   F KD  T  V+ +M K    + +  
Sbjct: 106 DAIKLMSSNKISGIPVVDNNKTLVGIITNRDL--RFAKDTKT-KVKSLMTKKVVTVDQGV 162

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A +LL +H I  L+VV+   + +G++   DL +
Sbjct: 163 KLENAKKLLHEHRIEKLVVVNKKFQCVGLITVKDLEK 199


>gi|119496427|ref|XP_001264987.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
 gi|119413149|gb|EAW23090.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
          Length = 661

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR---NFHKDLNTLSVEDV 288
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR   N  K    ++V ++
Sbjct: 113 IKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQK-AREITVAEI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 172 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 213


>gi|289192170|ref|YP_003458111.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus sp. FS406-22]
 gi|288938620|gb|ADC69375.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus sp. FS406-22]
          Length = 177

 Score = 47.4 bits (111), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G+G+SG+IG   A  L   G  S+FV        +     +DDL+I++S SG ++
Sbjct: 39  KIFVFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYE-----KDDLLILISGSGRTE 93

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +  +   A+  +  ++AI  E  +++   AD  LT+P E +   +    TT     L  
Sbjct: 94  SVLTVAKKAKGINNNIVAIVCECGNIID-FAD--LTIPLEVKKSKYLPMGTTFEETALIF 150

Query: 186 GDALAIALLESRNFSENDFYVLH 208
            D +   L++  N  E++    H
Sbjct: 151 LDLVIAELMKRLNLDESEIIKRH 173


>gi|295693504|ref|YP_003602114.1| transcriptional regulator, rpir family [Lactobacillus crispatus
           ST1]
 gi|295031610|emb|CBL51089.1| Transcriptional regulator, RpiR family [Lactobacillus crispatus
           ST1]
          Length = 281

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++IV S+SG + 
Sbjct: 132 QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILIVFSYSGLTQ 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G
Sbjct: 192 EPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYG 238


>gi|229543544|ref|ZP_04432604.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus coagulans 36D1]
 gi|229327964|gb|EEN93639.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus coagulans 36D1]
          Length = 438

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VVD   K+ GIIT  D+   + H     LS+E VM KNP  + E T +T    ++    I
Sbjct: 227 VVDRNLKVAGIITSKDVMETDTH-----LSIEKVMTKNPITVSEKTSVTSVAHMMVWEGI 281

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            +L V DD  +  GIV   D+L+
Sbjct: 282 EILPVTDDFNRLRGIVSRQDVLK 304


>gi|58698104|ref|ZP_00373027.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535350|gb|EAL59426.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 497

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 107 EAISLMREHNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNVKVSEVMTKDKLVTVRE 163

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 164 QGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 17/113 (15%)

Query: 233 VKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PLI  A+  ++E  F  +A+   G    GI   G I +N   D   L V      
Sbjct: 37  IELNIPLISSAMDTVTESGF-AIAIAQHG----GI---GCIHKNLSIDEQVLEVRRVKKY 88

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E  ++ NP  I  D  +  A+ L+R+HN S + VVD  +K +GI+   D +RF
Sbjct: 89  ESWIVYNPITISPDKTVAEAISLMREHNYSGIPVVDQ-RKLVGILTNRD-VRF 139


>gi|322372269|ref|ZP_08046810.1| CBS domain containing membrane protein [Haladaptatus
           paucihalophilus DX253]
 gi|320548278|gb|EFW89951.1| CBS domain containing membrane protein [Haladaptatus
           paucihalophilus DX253]
          Length = 380

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 48/85 (56%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V E  +L GII E  I     ++L+ L+V+ +  +NP  I ED  L   + L+R+H+
Sbjct: 93  VAPVFEDGQLWGIIDEDIILEGVLENLDALTVQQIYTENPVTIPEDATLGRVINLMREHS 152

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           IS L VV++     G+V   D++ F
Sbjct: 153 ISRLPVVNENGYLTGMVTTHDIVDF 177


>gi|256810321|ref|YP_003127690.1| protein of unknown function DUF39 [Methanocaldococcus fervens AG86]
 gi|256793521|gb|ACV24190.1| protein of unknown function DUF39 [Methanocaldococcus fervens AG86]
          Length = 507

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 56/102 (54%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL +     + +VDE  +L GIIT  DI +   +  N  ++E++M +N     E
Sbjct: 405 IMEAAKILIKHNINHLPIVDEQGRLVGIITSWDIAKALAQ--NKKTIEEIMTRNVVTAYE 462

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D  +      + ++NIS + VVD+ ++ +G+V   D+ R FG
Sbjct: 463 DEPVDHVAVKMSKYNISGVPVVDNYRRVVGVVTSEDISRLFG 504


>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
           DSM 2588]
 gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
           pinensis DSM 2588]
          Length = 120

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           + +A+ +L EK  G + VVDE +KL GI TE D  R      +      V D+M  +P  
Sbjct: 1   MYEALEVLEEKNLGALVVVDESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVF 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  DT +   MQL+    I  L V+++  +  GI+   D+++
Sbjct: 61  VSPDTDIEYCMQLMTNKFIRHLPVIEN-NELTGIISIGDIVK 101


>gi|328949768|ref|YP_004367103.1| inosine-5'-monophosphate dehydrogenase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450092|gb|AEB10993.1| inosine-5'-monophosphate dehydrogenase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 489

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  +++E + G + VVD    L G++T  DI   F  DLN   V +VM    +++  
Sbjct: 110 LEDAERLMAEYKIGGLPVVDLYGTLLGLVTNRDI--RFETDLNR-PVTEVMTPRERLVTA 166

Query: 299 D--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++LRQH I  L +VD+  K  G++   D+++
Sbjct: 167 PVGTTLDDAEEILRQHKIEKLPLVDESGKLKGLLTLKDIVK 207


>gi|119509031|ref|ZP_01628182.1| two-component hybrid sensor and regulator [Nodularia spumigena
           CCY9414]
 gi|119466197|gb|EAW47083.1| two-component hybrid sensor and regulator [Nodularia spumigena
           CCY9414]
          Length = 1045

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 54/107 (50%), Gaps = 7/107 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
           DS  L   G  LI +I  L+ ++  CV VVD  QKL G  TE DI R       L  +++
Sbjct: 40  DSCQLANSG--LIPSINKLNLEKASCVLVVD-NQKLIGTFTERDIVRCTAMEMSLEQVTL 96

Query: 286 EDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +VM  NP  + +     + V + L RQ+ I  L +VDD    IG+V
Sbjct: 97  AEVMSSNPVTLKKSEFHNIFVVLNLFRQYKIRHLSIVDDQGDLIGLV 143


>gi|20559816|gb|AAM27591.1|AF498403_10 ORF_10; similar to Nucleotidyl transferase [Pseudomonas aeruginosa]
          Length = 348

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVM 289
           L+ +   + DAIT L       V +V++ ++L G +T+GD+ R   K   LNT  V +VM
Sbjct: 8   LITLDSTIEDAITTLDRVAMRIVMIVNDQRQLLGTLTDGDVRRALLKQLPLNT-PVGNVM 66

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K P+    D      + ++ ++++  L ++D+ +K IG+    DLL
Sbjct: 67  CKTPRTAERDWGRERILSVMEKYSLLQLPIIDEKRKVIGLQTLHDLL 113


>gi|172056185|ref|YP_001812645.1| glucosamine--fructose-6-phosphate aminotransferase [Exiguobacterium
           sibiricum 255-15]
 gi|171988706|gb|ACB59628.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Exiguobacterium sibiricum 255-15]
          Length = 598

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 97/204 (47%), Gaps = 20/204 (9%)

Query: 16  HSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           H ++K    Q A +R+I+ + +  S       GE++     +V  +   + RV I G G 
Sbjct: 248 HYMLKEMDEQPAVIRNIVQKYQNES-------GEITLD--QSVRDLVLGRDRVYIIGCGT 298

Query: 75  SGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           S H   IG +L   +A  G P+  VH +     ++ ++T   L + LS SG + + +A+L
Sbjct: 299 SYHAGLIGKQLIEQIA--GIPTE-VHISSEFGYNMPLLTEKPLFLFLSQSGETADSRAVL 355

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             A++   P + IT+   S ++  A+  L L   PE     +A T +   Q+A+   LA 
Sbjct: 356 VEAKKLGHPALTITNVAGSTLSREANATLLLHAGPEIA---VASTKAYTAQIAVLAVLAF 412

Query: 192 ALLESRNFSENDFYVLHPGGKLGT 215
            L +++    N F ++   GK+ +
Sbjct: 413 DLAQAKGVDVN-FDLMKELGKISS 435


>gi|225630007|ref|YP_002726798.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
 gi|225591988|gb|ACN95007.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
          Length = 497

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 107 EAISLMREHNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNVKVSEVMTKDKLVTVRE 163

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 164 QGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204



 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 17/113 (15%)

Query: 233 VKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PLI  A+  ++E  F  +A+   G    GI   G I +N   D   L V      
Sbjct: 37  IELNIPLISSAMDTVTESGF-AIAIAQHG----GI---GCIHKNLSIDEQVLEVRRVKKY 88

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E  ++ NP  I  D  +  A+ L+R+HN S + VVD  +K +GI+   D +RF
Sbjct: 89  ESWIVYNPITISPDKTVAEAISLMREHNYSGIPVVDQ-RKLVGILTNRD-VRF 139


>gi|254167299|ref|ZP_04874151.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|197623562|gb|EDY36125.1| SIS domain protein [Aciduliprofundum boonei T469]
          Length = 178

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 78/174 (44%), Gaps = 12/174 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S+E SL        +  V+ I   K ++ + G G+SG +G   A  L   G  ++F+ 
Sbjct: 10  LESIEKSLNAIDVSLVNQGVDMITEAK-QIFVYGSGRSGLVGKFFAMRLVQLGLVAYFIG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++ + DL++++S +G +     +    +R    +IAITS  KS +A HAD
Sbjct: 69  ETITP-----VVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAKSPLAKHAD 123

Query: 158 IVLTLPKEPES---CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +   +  E E     P G     +A++ L   D++  +L+     +E D    H
Sbjct: 124 LTFVIRYEKEKGELAPLGTLFEDAAVVFL---DSIISSLMNKLGQTEEDMRRRH 174


>gi|58696722|ref|ZP_00372267.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58537090|gb|EAL60210.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 494

 Score = 47.4 bits (111), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 104 EAISLMREHNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNVKVSEVMTKDKLVTVRE 160

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 161 QGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 201



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 17/113 (15%)

Query: 233 VKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PLI  A+  ++E  F  +A+   G    GI   G I +N   D   L V      
Sbjct: 34  IELNIPLISSAMDTVTESGF-AIAIAQHG----GI---GCIHKNLSIDEQVLEVRRVKKY 85

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E  ++ NP  I  D  +  A+ L+R+HN S + VVD  +K +GI+   D +RF
Sbjct: 86  ESWIVYNPITISPDKTVAEAISLMREHNYSGIPVVDQ-RKLVGILTNRD-VRF 136


>gi|225849786|ref|YP_002730020.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
 gi|225645461|gb|ACO03647.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 81/199 (40%), Gaps = 24/199 (12%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL LP++ +  PH                P  SA M       LAIAL       E  
Sbjct: 14  DDVLLLPQKSDVLPHEADVSSYLTPKIKLNIPIVSAAMDTVTEHRLAIALAR-----EGG 68

Query: 204 FYVLHPGGKLGTLFVCASDV--MHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDE 259
             ++H    +         V    SG     V IG    + +A+ I++  +   V VVD 
Sbjct: 69  IGIIHRNMSIEDQMKEVEKVKKAESGMITEPVTIGPDQTVKEALEIMATYKISGVPVVDS 128

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLM 318
             KL GI+T  D+ R  HK      V   M K P +   E T L  AM +L++H +  L 
Sbjct: 129 ENKLIGILTNRDL-RFLHKKDYRKPVSQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLP 187

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVDD     G++   D+++
Sbjct: 188 VVDDEGHLKGLITIKDIVK 206


>gi|320590954|gb|EFX03395.1| cbs and pb1 domain containing protein [Grosmannia clavigera kw1407]
          Length = 692

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R        N++++ ++M
Sbjct: 115 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGTKANSVTIAEIM 174

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 175 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 215


>gi|149278015|ref|ZP_01884154.1| IMP dehydrogenase/GMP reductase [Pedobacter sp. BAL39]
 gi|149231213|gb|EDM36593.1| IMP dehydrogenase/GMP reductase [Pedobacter sp. BAL39]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  I+ + + G + V+D   KL GIIT  D+   F KD+     E +  +N     E T
Sbjct: 112 DAFQIMKDFKIGGIPVIDADNKLVGIITNRDL--RFQKDMQRKVSEVMTRENLITAPEGT 169

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A ++L+ + I  L VVD      G++ F D+ ++
Sbjct: 170 TLMQAEEILQDYKIEKLPVVDAQGHLAGLITFKDIQKY 207


>gi|127513297|ref|YP_001094494.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
 gi|126638592|gb|ABO24235.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
          Length = 615

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 231 PL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVED 287
           PL + I   + DA  ++ + R   V ++D  QKL GI+T+ D+  R   + L+ +L V  
Sbjct: 160 PLCLDINASVSDAARLMRDNRVSSVLIID-NQKLAGILTDRDLRNRVLAESLDGSLPVHQ 218

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            M   P  +  + L+  AM L+ QHNI  L ++D+    IG++   D+LR
Sbjct: 219 AMTVTPTTLSANALVFEAMLLMSQHNIHHLPIMDEGH-PIGVITSTDILR 267


>gi|225677137|ref|ZP_03788136.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590804|gb|EEH12032.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 497

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 107 EAISLMREHNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNVKVSEVMTKDKLVTVRE 163

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 164 QGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 17/113 (15%)

Query: 233 VKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PLI  A+  ++E  F  +A+   G    GI   G I +N   D   L V      
Sbjct: 37  IELNIPLISSAMDTVTESGF-AIAIAQHG----GI---GCIHKNLSIDEQVLEVRRVKKY 88

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E  ++ NP  I  D  +  A+ L+R+HN S + VVD  +K +GI+   D +RF
Sbjct: 89  ESWIVYNPITISPDKTVAEAISLMREHNYSGIPVVDQ-RKLVGILTNRD-VRF 139


>gi|288930768|ref|YP_003434828.1| 6-phospho 3-hexuloisomerase [Ferroglobus placidus DSM 10642]
 gi|288893016|gb|ADC64553.1| 6-phospho 3-hexuloisomerase [Ferroglobus placidus DSM 10642]
          Length = 189

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 14/160 (8%)

Query: 58  EKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E I AI+G  R+ + G G+SG +    A  L   G   + V            I ++D++
Sbjct: 31  ELINAIQGAKRIFVMGAGRSGFVAKAFAMRLMHLGYNVYVVGETVTPR-----IDKEDVL 85

Query: 116 IVLSWSGSSDELKAILYYARRF-SIPLIAITSENKSVVACHADIVL----TLPKEPESCP 170
           I +S SG +  +  I   A+      L+AIT    S +A  +D+V+     L  E     
Sbjct: 86  IAISGSGETTSVVNISKKAKEMIGSKLVAITGNPNSSLAQMSDVVVLIKGKLKNETNEEL 145

Query: 171 HGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             +AP  T   +M L   D L   L+  +N SE D    H
Sbjct: 146 SQIAPLGTMFELMSLIFLDGLVAELMRIKNLSEKDLAERH 185


>gi|312131548|ref|YP_003998888.1| inosine-5'-monophosphate dehydrogenase [Leadbetterella byssophila
           DSM 17132]
 gi|311908094|gb|ADQ18535.1| inosine-5'-monophosphate dehydrogenase [Leadbetterella byssophila
           DSM 17132]
          Length = 489

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 12/102 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVEDVMIKNPKV 295
           DA+ I+ E + G + V+D   +LKGI+T  D+   F  D++      ++VE ++     +
Sbjct: 111 DALRIMREFKVGGIPVIDSENRLKGIVTNRDL--RFQSDMSLPITQVMTVERLVTAGEGI 168

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LE+     A  +L +  I  L +VD   K +G++ + D+L+
Sbjct: 169 TLEE-----AEHILMREKIEKLPIVDKDNKLVGLITYRDILK 205


>gi|37521628|ref|NP_925005.1| two-component sensor histidine kinase [Gloeobacter violaceus PCC
           7421]
 gi|35212626|dbj|BAC90000.1| two-component sensor histidine kinase [Gloeobacter violaceus PCC
           7421]
          Length = 682

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 47/82 (57%), Gaps = 5/82 (6%)

Query: 253 CVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTV--AMQL 308
           CV +V EG  L GIITEGDI R     KDL  +   +VM+     +++D    +  A+ L
Sbjct: 66  CV-LVAEGAHLVGIITEGDIVRLTALGKDLAAVRAGEVMLGGVVTLVQDGRQDILGALDL 124

Query: 309 LRQHNISVLMVVDDCQKAIGIV 330
           +R+HN+  L V+DD  +  G++
Sbjct: 125 MRRHNVRHLPVLDDGGRVTGLL 146


>gi|70991156|ref|XP_750427.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
 gi|66848059|gb|EAL88389.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
 gi|159130901|gb|EDP56014.1| CBS and PB1 domain protein [Aspergillus fumigatus A1163]
          Length = 661

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR---NFHKDLNTLSVEDV 288
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR   N  K    ++V ++
Sbjct: 113 IKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQK-AREITVAEI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 172 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 213


>gi|300772656|ref|ZP_07082526.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760959|gb|EFK57785.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 491

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 19/172 (11%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM-----HSG-- 227
           P  SA M    G  LAIA+ ++         +LH   K  T+   A++V       SG  
Sbjct: 47  PLVSAAMDTVTGSDLAIAIAQAGGIG-----MLH---KNMTITEQAAEVRKVKRSESGMI 98

Query: 228 -DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            D + L++    + DA  I+SE + G + ++D   KL GI+T  D+   F KD+     E
Sbjct: 99  QDPVTLLETAT-VGDAFKIMSEHKIGGIPIIDGSGKLVGIVTNRDL--RFQKDMKRPISE 155

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   N  V  E T L  A  +L+ + I  L VV++     G++ F D+ ++
Sbjct: 156 LMTRDNLVVAPEGTDLVQAELILQNYKIEKLPVVNEEGLLKGLITFKDIQKY 207


>gi|167629802|ref|YP_001680301.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
 gi|167592542|gb|ABZ84290.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
          Length = 129

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 65/113 (57%), Gaps = 7/113 (6%)

Query: 231 PLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVE 286
           P++  G   P+ DA+ +++EK    + V+D+ ++L GI+   DI +       +    VE
Sbjct: 10  PVITTGIFTPIRDALRMMTEKNIRRLPVIDDKERLVGIVAFHDIDKAMRSPGVIPLTPVE 69

Query: 287 DVMIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM KNP V +E T+ L  +++++R++ +S L VV   +K +GI+   D+L+ 
Sbjct: 70  WVMTKNP-VYVEATMPLADSVRMMRRYKVSCLPVVAG-EKVVGILSVSDILQL 120


>gi|327396522|dbj|BAK13943.1| hypothetical protein RpiR [Pantoea ananatis AJ13355]
          Length = 292

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM-ITRDDLIIVLSWSGSS 124
           +V I GI  SG +    A  L   G  SF ++ A  +  +  + + R D++I+++   + 
Sbjct: 141 QVAIFGINASGILADYSARLLNRIGLASFSLNRAGIALAEQMLALQRGDVLIMMAQKSAH 200

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK--EPESCP-HGLAPTTSAIM 181
            E   ++  A+R  +P+I +T+   S  A  AD+V+ +P+  E    P HG       +M
Sbjct: 201 REGSTVVREAKRLGVPIILLTNATDSFFAREADVVINVPRGGEKGRIPLHGTVMVCLEMM 260

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGK 212
            L++  +L    +++    ++ +  L P  K
Sbjct: 261 ILSVASSLPDRTVKTMKRLQDLYRGLKPAAK 291


>gi|307352907|ref|YP_003893958.1| CBS domain-containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156140|gb|ADN35520.1| CBS domain containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 301

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 52/95 (54%), Gaps = 1/95 (1%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           +++ EK+ G + ++D    +KGI+TE D+ +  +   + L+V DVM ++P +   D  +T
Sbjct: 118 SLIVEKKCGGIPILDSDGAIKGIVTERDVLKVMNYQDSPLTVRDVMTRSPYITSPDNTVT 177

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +  H    L VV +     GI+  +D++++
Sbjct: 178 NVAKEMISHKFRRLPVVSE-DVLFGIITAMDIMKY 211


>gi|303243770|ref|ZP_07330111.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302486012|gb|EFL48935.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 312

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  I  +       ++  G  L GI+T  D+       L   SVE +M KNP  I  D 
Sbjct: 197 DAAKIFYDNNINGAPIISNGN-LVGILTLHDLAYALSNSLENESVEKIMAKNPLTITPDK 255

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A+ L+ +  +  L+VVD   K IGI+   D+L+ 
Sbjct: 256 KVYDALILMEKQGVGRLIVVDKDSKVIGIITRTDVLKL 293


>gi|256810527|ref|YP_003127896.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793727|gb|ACV24396.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 297

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 16/123 (13%)

Query: 229 SIPLVKIG-------------CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           SIP VK+G               L +A  + +EK      VVD    L GII+  DI  N
Sbjct: 166 SIPNVKVGEVGIQKVYTLNPDNTLKEAAKLFAEKNISGAPVVD-NDNLIGIISLHDIAEN 224

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V++VM KN   I +D  +  A++++ ++N+  L++VDD  K +GI+   D+
Sbjct: 225 IEN--VDRKVKEVMNKNVLTIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDI 282

Query: 336 LRF 338
           L+ 
Sbjct: 283 LKI 285


>gi|70606966|ref|YP_255836.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68567614|gb|AAY80543.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 272

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ++DA+TI+  +  G + V+D  +K+KGI+TE ++   F    +   V   M K    I E
Sbjct: 93  VVDALTIMVARNLGSLPVIDVEKKVKGIVTEREMMLIFQDLDHVYPVSKFMTKRVTTIYE 152

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +    +L+ +     L VVD   K +G++   D+L+
Sbjct: 153 DMPVVEGAKLMVKRGFRRLPVVDTEGKLVGVITAADILK 191



 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 8/107 (7%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLS------VEDVM 289
           P+++   ++ ++ F  + VVD   KL G+IT  DI +NF K L  N+L       ++D+ 
Sbjct: 155 PVVEGAKLMVKRGFRRLPVVDTEGKLVGVITAADILKNFLKHLSKNSLDTFYYEKIKDIK 214

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             N   I  +  +  A   +    I  L+VVD+      IV   DL+
Sbjct: 215 TPNVHTIDPNKSINEAAAKMLLERIGSLIVVDNDNVPTAIVTERDLI 261


>gi|78044937|ref|YP_360768.1| polyA polymerase family protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77997052|gb|ABB15951.1| polyA polymerase family protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 864

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 2/89 (2%)

Query: 250 RFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           R+G   + V EG KL GII+  D+ +  H +L    V+  M KNP  I  +  L  A++L
Sbjct: 335 RYGHSGLPVLEGDKLVGIISRRDVDKIIHHNLGHAPVKAYMSKNPVTIEPEASLEEALRL 394

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L +H+I  L VV+   K IGI+   DLL+
Sbjct: 395 LIKHDIGRLPVVEGG-KLIGIISRTDLLK 422


>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
 gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
          Length = 242

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 53/126 (42%), Gaps = 25/126 (19%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------------- 282
           G  L +A  ++ E R   + VVD+  KL GIITEGD  R       T             
Sbjct: 17  GTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGTQTRRARWLAFFVGPG 76

Query: 283 -----------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                        V +VM   P  + E T L   ++L+ +HNI  L VV   Q  +GIV 
Sbjct: 77  RAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIKRLPVVRGLQ-LLGIVT 135

Query: 332 FLDLLR 337
             DLLR
Sbjct: 136 RTDLLR 141


>gi|257387824|ref|YP_003177597.1| hypothetical protein Hmuk_1776 [Halomicrobium mukohataei DSM 12286]
 gi|257170131|gb|ACV47890.1| CBS domain containing membrane protein [Halomicrobium mukohataei
           DSM 12286]
          Length = 381

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +A V EG  L G++T  DI     ++L+ L+VE +  K+   I E+T +  A+ LLR+H+
Sbjct: 93  IAPVFEGGSLWGVVTGDDILEAVLENLDALTVEQIYTKDVVTITEETHVGQAINLLRKHS 152

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           IS + V+DD     G+V   D++
Sbjct: 153 ISRIPVLDDDGDLSGMVTTHDIV 175


>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
 gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
          Length = 481

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED- 299
           +A  ++ E R   V VVD  +KL GIIT  D+   F  D+ +L V D M   P V  +  
Sbjct: 107 EADALMGEYRISGVPVVDADKKLIGIITNRDM--RFITDM-SLKVADTMTPAPLVTAKKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 164 TTLEEAAKVLQKHKIEKLPIVDDDGKLNGLITIKDIEK 201


>gi|84498468|ref|ZP_00997238.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
 gi|84381211|gb|EAP97095.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
          Length = 142

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 21/56 (37%), Positives = 33/56 (58%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V   GD++  V+    + D + +L+E R G V V D+GQ + GI++E DI R+  K
Sbjct: 7   VKRKGDTVITVRSDASVTDLLDLLAEHRIGAVVVSDDGQSVDGIVSERDIVRHLQK 62


>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 140

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 5/99 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE 298
           A  I++E+  G + VV  G+K  G++TE D+ R            SVEDVM     V+ E
Sbjct: 28  AAKIMAEEEVGSL-VVTVGEKPVGVLTERDVVRRVVAAGLSPRRTSVEDVMTSPVVVVGE 86

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T L  A+ ++  + +  L+VV D +K +GIV   D++R
Sbjct: 87  NTSLEEAVAIMASNRVRRLLVVRD-EKLVGIVTVTDIVR 124


>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
 gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
          Length = 163

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           + DA+ I++ +R G + VV EG ++ GI+TE D  R     H+      V D+M    + 
Sbjct: 25  VYDAVAIMAHRRVGALIVVHEG-RVAGIVTERDYARKIALMHRSSRNTPVRDIMSTTVRY 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +         M L+ ++ I  L V+ + Q  IG+V   DL++
Sbjct: 84  VGPGQTTEECMALMTEYRIRYLPVITEGQ-VIGMVSIGDLIK 124


>gi|296332083|ref|ZP_06874547.1| hypothetical protein BSU6633_13282 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675522|ref|YP_003867194.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150854|gb|EFG91739.1| hypothetical protein BSU6633_13282 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413766|gb|ADM38885.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 439

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK F    G   VVD+  K+ GI+T  DI  +   D N   +E VM KNP  +
Sbjct: 208 DKLEKWYEKNFETGHGRFPVVDDQMKIHGILTSKDIAGH---DRNA-PIEKVMTKNPVTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q +    I VL V D  QK IG++   D+L+
Sbjct: 264 IGKTSVASAAQTMVWEGIEVLPVTDGHQKLIGMISRQDVLK 304


>gi|282859613|ref|ZP_06268716.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
           JCVIHMP010]
 gi|282587616|gb|EFB92818.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
           JCVIHMP010]
          Length = 494

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ +++E   G + VVD+   L GI+T  D+   F + L+  S+++VM  +
Sbjct: 105 IRRGSTVRDALAMMAEYHIGGIPVVDDDNHLVGIVTNRDL--RFERRLDK-SIDEVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N     + T L  A  +L+++ I  L VVD+    +G++ + D+ +
Sbjct: 162 NLVTTHQKTNLAEAADILQENKIEKLPVVDNNNHLVGLITYKDITK 207


>gi|260062187|ref|YP_003195267.1| putative inosine-5'-monophosphate dehydrogenase [Robiginitalea
           biformata HTCC2501]
 gi|88783749|gb|EAR14920.1| putative inosine-5'-monophosphate dehydrogenase [Robiginitalea
           biformata HTCC2501]
          Length = 490

 Score = 47.0 bits (110), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+       E    VLH    +    +    V  +   + L  
Sbjct: 47  PIVSAAMDTVTESRMAIAMAR-----EGGMGVLHKNMTIEQQALKVRRVKRAESGMILDP 101

Query: 235 IGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P    + DA   + E   G + +V+ G +L GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPQDAFVRDAKASMKEHSIGGIPIVNGGGELIGIVTNRDL--RFEKN-NDRPISEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N     E T L  A  +L+++ I  L VVDD  + IG++ F D+ + 
Sbjct: 159 SENLVTTREGTSLAEAEDILQENKIEKLPVVDDDNRLIGLITFRDITKL 207


>gi|150402528|ref|YP_001329822.1| hypothetical protein MmarC7_0604 [Methanococcus maripaludis C7]
 gi|150033558|gb|ABR65671.1| protein of unknown function DUF39 [Methanococcus maripaludis C7]
          Length = 513

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +A  IL E     + ++DE  KL GIIT  DI +   +D +++S  ++M         
Sbjct: 407 ITEASRILIENNINHLPIIDENGKLSGIITSWDIAKAMAQDKHSIS--EIMTTYIVSATP 464

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 465 DETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504


>gi|148655070|ref|YP_001275275.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567180|gb|ABQ89325.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 225

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 12/113 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----------FRNFHKDLNTLSVED 287
           L +A  ++ ++R   + +V+ G KL GIIT GD+           +  +   L+ ++V +
Sbjct: 23  LAEAQRLMEQRRIRRLPIVENG-KLAGIITRGDLRSAQPVDTTLSYYEWRALLDRVTVAE 81

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            M ++   I  D     A +L+ +H I  L VVDD  + +GI+   DL R  I
Sbjct: 82  CMTRHVITITPDASTLDAARLMLKHKIGGLPVVDDEGRVVGIITESDLFRLQI 134


>gi|317037370|ref|XP_001399033.2| CBS and PB1 domain protein [Aspergillus niger CBS 513.88]
          Length = 662

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L    ++V ++M
Sbjct: 112 IKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIM 171

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 172 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 212


>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           472 str. F0295]
 gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           472 str. F0295]
          Length = 494

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ ++ +   G + VVD+  +L GI+T  D+   F   L+   +++VM  +
Sbjct: 105 IRKGRTVKDALAMMHDYHIGGIPVVDDDNRLVGIVTNRDL--RFEHRLDK-KIDEVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N  V  + T L  A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITK 207


>gi|156741986|ref|YP_001432115.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156233314|gb|ABU58097.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 143

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 68/127 (53%), Gaps = 13/127 (10%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           SDVMH G  +   ++  P+ +A+ ++ E R   + +VD    L GI+++ D+ R + K+ 
Sbjct: 7   SDVMHYG--VISCRVETPVEEALALMQEHRIHALVIVDGPGYLAGIVSQTDLLRAW-KEG 63

Query: 281 NTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA----IGIV 330
           ++        V D+M ++    + +  L  A+QLL +++I  L+VV++        IG++
Sbjct: 64  SSFEAVMRGPVGDIMTRSVVTCMPEMELDRAIQLLNRNHIHRLVVVEERNDGRFWPIGVL 123

Query: 331 HFLDLLR 337
              D++R
Sbjct: 124 SMTDIVR 130


>gi|157693330|ref|YP_001487792.1| CBS domain-containing protein [Bacillus pumilus SAFR-032]
 gi|157682088|gb|ABV63232.1| CBS domain transcriptional regulator [Bacillus pumilus SAFR-032]
          Length = 440

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK +    G   V D+  K+ GI+T  DI  +      +  +E VM KNP  +
Sbjct: 208 DKLEKWYEKNYETGHGRFPVADDQMKIHGILTSKDIAGHDR----SAPIEKVMTKNPLTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL VVDD  K IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVVDDYAKLIGMISRQDVLK 304


>gi|88602140|ref|YP_502318.1| signal transduction protein [Methanospirillum hungatei JF-1]
 gi|88187602|gb|ABD40599.1| putative signal transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 287

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 9/98 (9%)

Query: 241 DAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILE 298
           D + IL  KR G   V V +G KL GIIT  D+    HK + N L++  +M  +P  I  
Sbjct: 25  DVLKIL--KRTGISGVPVLKGGKLVGIITRKDLL---HKPEENQLAL--LMTPDPLTIRS 77

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  LT A +++R HNI  + V+D+ +  +G++   DL+
Sbjct: 78  DATLTEAARIMRTHNIRRMPVLDEAKNLVGLISVADLI 115


>gi|146312873|ref|YP_001177947.1| transcriptional regulator [Enterobacter sp. 638]
 gi|145319749|gb|ABP61896.1| transcriptional regulator [Enterobacter sp. 638]
          Length = 274

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  IG  L   L   G P+        +  +   +T DDL++ +S SGS+ +
Sbjct: 127 VYIYGVAASAIIGDYLHYKLLRLGKPAQLFSDMHRASMNATTLTSDDLVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+    ++A+++  +S +   +D++L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKRGAHVLALSNTPRSPLTSLSDMLLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALLESRNFSENDFY 205
             L + LL +   S +D Y
Sbjct: 240 VMLLVELLATTMISLDDRY 258


>gi|67539092|ref|XP_663320.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
 gi|40743619|gb|EAA62809.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
 gi|259484807|tpe|CBF81345.1| TPA: CBS and PB1 domain protein (AFU_orthologue; AFUA_1G06780)
           [Aspergillus nidulans FGSC A4]
          Length = 666

 Score = 47.0 bits (110), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L    ++V ++M
Sbjct: 119 IKPSTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKARDITVSEIM 178

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 179 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 219


>gi|288560461|ref|YP_003423947.1| homoserine O-acetyltransferase MetX2 [Methanobrevibacter
           ruminantium M1]
 gi|288543171|gb|ADC47055.1| homoserine O-acetyltransferase MetX2 [Methanobrevibacter
           ruminantium M1]
          Length = 490

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +P + I   + DA  I+ + +   + VVDE  KL GI+T  D+ ++  KD   L  EDVM
Sbjct: 380 VPTIDINSTIKDAANIMFDNQVTHLPVVDENDKLLGIVTAWDLSKSIAKDCKLL--EDVM 437

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            K+ +       +    + +++ +IS L VV+D
Sbjct: 438 TKDVRYCKSTDSIEYISRQMKKFDISCLPVVND 470


>gi|163846436|ref|YP_001634480.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222524210|ref|YP_002568681.1| CBS domain-containing membrane protein [Chloroflexus sp. Y-400-fl]
 gi|163667725|gb|ABY34091.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222448089|gb|ACM52355.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
          Length = 154

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 60/115 (52%), Gaps = 12/115 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FR-------NFHKDL 280
           + +  PL +A+ ++ E     + VV +  +L+GIIT+GDI      R       +  + L
Sbjct: 26  INLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIMRVAGLDPVDIAQAL 85

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + V +VM ++P  +  +T L  A  L+ ++ I  L V+D+ ++ IGI+   DL
Sbjct: 86  RNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITESDL 140


>gi|332795992|ref|YP_004457492.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332693727|gb|AEE93194.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 140

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
           G  L D + I++    G V + D+ +K  GIITE DI R   K +  T  +E+V   +  
Sbjct: 19  GTKLEDVVKIMASMNIGSVIITDK-EKPVGIITERDIIRALAKGIPLTEKIENVGTMDLI 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + ED  +  A + + ++NI  L+V+D      G++   DL+R
Sbjct: 78  TVFEDDSIYTAAEKMNKYNIRHLVVIDKEGNFKGVISIRDLIR 120


>gi|55378301|ref|YP_136151.1| hypothetical protein rrnAC1525 [Haloarcula marismortui ATCC 43049]
 gi|55231026|gb|AAV46445.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 380

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 44/78 (56%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E  +L GI+TE DI      +L+ LSVED+  ++   + EDT +   + LLR+H IS L 
Sbjct: 98  EAGELWGIVTEDDILDAVLDNLDALSVEDIYTRDVITVSEDTNVGQVVNLLRKHGISRLP 157

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V+ D     G+V   D++
Sbjct: 158 VLGDDDGLTGMVTRHDIV 175


>gi|15612583|ref|NP_240886.1| inosine 5'-monophosphate dehydrogenase [Bacillus halodurans C-125]
 gi|34395726|sp|Q9KGN8|IMDH_BACHD RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|10172632|dbj|BAB03739.1| inositol-monophosphate dehydrogenase [Bacillus halodurans C-125]
          Length = 485

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  ++ + R   V +VDE QKL GI+T  D+   F +D +TL ++DVM K   V   
Sbjct: 108 VFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDL--RFIEDYSTL-IDDVMTKENLVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 165 VGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202


>gi|115389224|ref|XP_001212117.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194513|gb|EAU36213.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 668

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    ++V ++M
Sbjct: 120 IKPNTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKAREITVSEIM 179

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 180 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 220


>gi|75908381|ref|YP_322677.1| voltage gated Cl- channel protein [Anabaena variabilis ATCC 29413]
 gi|75702106|gb|ABA21782.1| Cl- channel, voltage gated [Anabaena variabilis ATCC 29413]
          Length = 862

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 2/82 (2%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V E  KL GIIT+ D+ ++  ++L N   + ++M  NP  +     L+  + LL ++ IS
Sbjct: 473 VVEDNKLVGIITQSDLTKSLSRNLENHPHLREIMTANPMTVTPIHTLSNVLYLLDRYQIS 532

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L VVD  QK IGI+   D++R
Sbjct: 533 RLPVVDG-QKLIGIITRADIIR 553


>gi|225680402|gb|EEH18686.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb03]
          Length = 676

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V DE +++ GI T  D+ FR     +    +++ ++M
Sbjct: 105 IKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 164

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 165 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 205


>gi|319951912|ref|YP_004163179.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
           14237]
 gi|319420572|gb|ADV47681.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
           14237]
          Length = 490

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 74/169 (43%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+ +     E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESKMAIAMAQ-----EGGIGVLHKNMTIEQQAMKVRKVKRAESGMIIDP 101

Query: 235 IGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VD   KL GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPLNSFVRDAKANMKEFGIGGIPIVDGDGKLIGIVTNRDL--RFEKN-NDRPISEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            KN   + E T L  A  +L+++ I  L VVD   K +G++ F D+ + 
Sbjct: 159 TKNLVTVAEGTSLEQAEDILQENKIEKLPVVDKNYKLVGLITFRDITKL 207


>gi|313673776|ref|YP_004051887.1| cbs domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940532|gb|ADR19724.1| CBS domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 222

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 54/110 (49%), Gaps = 13/110 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           ++DA+ ++ E +   + V  +G+KL GIITE DI                H  L    V+
Sbjct: 20  VLDALHVMRENKLRRIPVA-KGKKLLGIITEKDIKTFSPSKASTLDIYEMHNILADTLVK 78

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DVM KNP  +  D  +  A  +LR   I  L VVD+  + +GI+  +D+ 
Sbjct: 79  DVMTKNPINVAPDDPIEKAALILRDKRIGGLPVVDEKGELVGIITAIDVF 128



 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 14/86 (16%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP---- 293
           P+  A  IL +KR G + VVDE  +L GIIT  D+F  F        VE + ++ P    
Sbjct: 93  PIEKAALILRDKRIGGLPVVDEKGELVGIITAIDVFDVF--------VEAMGMRIPGARI 144

Query: 294 KVILEDTLLTVA--MQLLRQHNISVL 317
            ++L+D    +A   ++++QH+++++
Sbjct: 145 SIVLDDRPGAIAEMAKIIKQHDLNIV 170


>gi|87118536|ref|ZP_01074435.1| CBS domain protein [Marinomonas sp. MED121]
 gi|86166170|gb|EAQ67436.1| CBS domain protein [Marinomonas sp. MED121]
          Length = 673

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)

Query: 256 VVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +V EG+ L GIIT+ D+  R   K L+ L  +  +M + P  + E +L   A  L+ + N
Sbjct: 241 LVVEGETLIGIITDRDLRSRVLAKGLSPLMPIATIMTRTPTFLDESSLCIHAQLLMSERN 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VDD Q+ +GI+   D+LR
Sbjct: 301 IHHLPIVDDRQRPVGIITATDILR 324


>gi|298208267|ref|YP_003716446.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
           atlanticus HTCC2559]
 gi|83848188|gb|EAP86058.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
           atlanticus HTCC2559]
          Length = 490

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+       E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAMAR-----EGGIGVLHKNMSIKKQALKVRKVKRAESGMIIDP 101

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P+     DA   + E   G + +VD+  KL GI+T  D+   F K+  + S+ +VM 
Sbjct: 102 VTLPITATVADAQASMKEFSIGGIPIVDDNGKLLGIVTNRDL--RFEKNY-SRSISEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N   + E T L  A  +L+QH I  L VV    K +G++ F D+ + 
Sbjct: 159 SENLVTVSEGTSLEDAEDILQQHKIEKLPVVSVEDKLVGLITFRDITKL 207


>gi|170725935|ref|YP_001759961.1| nucleotidyl transferase [Shewanella woodyi ATCC 51908]
 gi|169811282|gb|ACA85866.1| Nucleotidyl transferase [Shewanella woodyi ATCC 51908]
          Length = 352

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----VEDVMIKNPK 294
           L DA+ +++ +      V+D  Q L G+IT+GDI R     LN LS    V  VM  NP+
Sbjct: 16  LRDALELINSQALQVALVIDHNQHLLGVITDGDIRRGL---LNNLSLDAIVTQVMNTNPR 72

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                T     +QL++QH+I  + +V D
Sbjct: 73  TAAPSTSKKKLLQLMQQHSILSIPLVKD 100


>gi|332800152|ref|YP_004461651.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
 gi|332697887|gb|AEE92344.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
          Length = 132

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 60/105 (57%), Gaps = 7/105 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNP-KVIL 297
           A+ I+++++     +VDE  +L G+I + DI+R F  D     +  VE VM K   K   
Sbjct: 23  ALEIMNKEKVNGTPIVDEDNRLVGMIVKADIYR-FLMDPGHYKSCPVEWVMTKEVIKAHA 81

Query: 298 EDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
           ++ +L VA + LR +NI  L VV+ D  + +GI+ F D+L + II
Sbjct: 82  DEEILDVAKR-LRDYNIIALPVVEGDNDEVVGIISFEDILDYYII 125


>gi|304395008|ref|ZP_07376892.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
 gi|304357261|gb|EFM21624.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
          Length = 296

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM-ITRDDLIIVLSWSGSSD 125
           V I GI  SG +       L   G P+F ++ A  +  +  + + R D++++++   +  
Sbjct: 146 VAIFGINASGILADYSVRLLNRIGLPAFSLNRAGIALAEQMLALQRGDVLVMMAQQSAHR 205

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           E  A++  A+R  IP+I +T+   S  A  AD+V+ +P+  E    G  P    IM
Sbjct: 206 EGTAVVREAKRLDIPVILLTNATDSFFAREADVVINVPRGGE---KGRIPLHGTIM 258


>gi|296109088|ref|YP_003616037.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433902|gb|ADG13073.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 404

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P+IDA+  + +       +V+   K+ GI+T+ DI     +   L    V+ VM ++  
Sbjct: 82  TPIIDAVCEMIDAGQRAAPIVNTYGKMVGIVTDYDIMDRASRSIILKDTPVKKVMTRHVI 141

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I E+  +  A  L+R +NI  L+VVDD  K +GIV   D+L
Sbjct: 142 TINENETIGKARALMRDNNIGRLVVVDDDGKPVGIVTETDIL 183


>gi|226287801|gb|EEH43314.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 661

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V DE +++ GI T  D+ FR     +    +++ ++M
Sbjct: 83  IKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 142

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 143 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 183


>gi|296419865|ref|XP_002839512.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635673|emb|CAZ83703.1| unnamed protein product [Tuber melanosporum]
          Length = 642

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  I++ KR  CV V D+  ++ GI T  D+ FR     +N   +++  +M
Sbjct: 107 IKPNTTVAEAAQIMAAKREDCVLVTDDEDRISGIFTAKDLAFRVVGAGVNARDVTIAQIM 166

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 167 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 207


>gi|254459398|ref|ZP_05072819.1| ggef/eal/pas/pac-domain containing protein [Campylobacterales
           bacterium GD 1]
 gi|207084011|gb|EDZ61302.1| ggef/eal/pas/pac-domain containing protein [Campylobacterales
           bacterium GD 1]
          Length = 835

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 73/141 (51%), Gaps = 8/141 (5%)

Query: 200 SENDFYVLHPGG-KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF + H G   +G L     D+M+     PL+     LI  +  +  +R    A+V 
Sbjct: 117 SEGDF-LRHIGYIDVGAL-KAVEDIMNEA---PLMIDSNALIVDVAKMMSERHADTAIVM 171

Query: 259 EGQKLKGIITEGDIFRNF-HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  K  G++ E D+ R + HKD +  S V+ ++ K+   +++   L  A Q++ +H I  
Sbjct: 172 KNLKAHGVVRERDVTRYYAHKDFSLDSTVKKIIQKDLHFVVKSIPLQKAAQMMEEHGIHQ 231

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L+V D  +K IGI++  ++L+
Sbjct: 232 LVVADSQEKIIGIINRHEVLK 252



 Score = 42.4 bits (98), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 19/128 (14%)

Query: 214 GTLFVCASDV-MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G LF+   D+ MH               DA  ++  K +  + V +E  +  G+++EGD 
Sbjct: 77  GNLFMIKEDIYMH---------------DAYIMMQNKGYRHIIVTNENDEFVGVVSEGDF 121

Query: 273 FRNF-HKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R+  + D+  L +VED+M + P +I  + L+    +++ + +    +V+ +  KA G+V
Sbjct: 122 LRHIGYIDVGALKAVEDIMNEAPLMIDSNALIVDVAKMMSERHADTAIVMKNL-KAHGVV 180

Query: 331 HFLDLLRF 338
              D+ R+
Sbjct: 181 RERDVTRY 188


>gi|171186006|ref|YP_001794925.1| signal transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170935218|gb|ACB40479.1| putative signal transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 286

 Score = 46.6 bits (109), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 49/90 (54%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           EKR+  + VV+E +K  G++    +    +     + V+D+M+  P VI E+  +  A++
Sbjct: 188 EKRYRGIPVVNEERKPIGLLMASKLMEALYGCRKDVKVKDLMVGEPPVIHEEEDIHEAIR 247

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++    I  L+VV+   K +GIV   D+LR
Sbjct: 248 IMVSGGIGRLLVVNSEDKLVGIVTRTDILR 277


>gi|323706339|ref|ZP_08117904.1| Nucleotidyl transferase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534301|gb|EGB24087.1| Nucleotidyl transferase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 353

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 8/98 (8%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED----VMIKN 292
           C + +AI  L+E R   + VVD+  +L G +T+GDI R     LN +S+E     +M K 
Sbjct: 14  CIIKNAIKQLNENRLQILLVVDDEYRLVGTVTDGDIRRAI---LNNVSLEQPVFVIMNKK 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           PK +  +    VA +L+ ++ I  + V+D+ +K I ++
Sbjct: 71  PKYVY-NGQEEVAKELMLKYKIKTIPVLDNEKKVIDLI 107


>gi|237755674|ref|ZP_04584284.1| nucleotidyl transferase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692156|gb|EEP61154.1| nucleotidyl transferase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 171

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 49/89 (55%), Gaps = 7/89 (7%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE----DVMIKNPKVILEDTLLTVAMQL 308
            + VVD+   L G IT+GDI R     LNT ++E    ++  KNPK I  D     A Q+
Sbjct: 26  VLIVVDKNNHLLGTITDGDIRRYI---LNTGTIEGNIENIYNKNPKFIYSDDSKEKAKQI 82

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + +L V+D+ ++ +  + ++DL  
Sbjct: 83  MLENKVEILPVIDNQKRVVDYIVWIDLFE 111


>gi|212528298|ref|XP_002144306.1| CBS and PB1 domain protein [Penicillium marneffei ATCC 18224]
 gi|210073704|gb|EEA27791.1| CBS and PB1 domain protein [Penicillium marneffei ATCC 18224]
          Length = 675

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     L    +++ ++M
Sbjct: 109 IKPNTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAREVTIAEIM 168

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 169 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 209


>gi|238921583|ref|YP_002935098.1| sugar isomerase, KpsF/GutQ family [Edwardsiella ictaluri 93-146]
 gi|238871153|gb|ACR70864.1| sugar isomerase, KpsF/GutQ family [Edwardsiella ictaluri 93-146]
          Length = 93

 Score = 46.6 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/89 (30%), Positives = 45/89 (50%)

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIA T   +S +A  A + L    + E  P  +  TT+ I+ LA+ DA    L++   
Sbjct: 4   VPLIAATENPRSAIARAAQLTLATGVQHEIDPLNMLATTAIILVLALFDAACACLMQRSG 63

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           ++      +HPGG +G   + ++D   SG
Sbjct: 64  YARQTLPSVHPGGDVGLSLLRSADDQASG 92


>gi|237756107|ref|ZP_04584682.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691732|gb|EEP60765.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 488

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A+ I+S  +   V VVD+  KL GI+T  D+ R  HK      V + M K P V  ++ 
Sbjct: 109 EALEIMSIYKISGVPVVDDENKLVGILTNRDL-RFIHKKDYEKPVYEFMTKAPLVTAKEG 167

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L  A+ +L++H +  L VVDD  +  G++   D+++
Sbjct: 168 ITLDEAIDILQKHKVEKLPVVDDEGRLKGLITIKDIVK 205



 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 16/115 (13%)

Query: 231 PLVKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV- 288
           P +K+  PL+ A +  ++E R   +A+  EG    GI   G I RN   +     VE V 
Sbjct: 37  PNIKVNIPLVSAAMDTVTEHRL-AIALAREG----GI---GIIHRNMSIEDQMREVEKVK 88

Query: 289 -----MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                MI +P  +  + L+  A++++  + IS + VVDD  K +GI+   D LRF
Sbjct: 89  KAESGMITDPVTVRPNQLVKEALEIMSIYKISGVPVVDDENKLVGILTNRD-LRF 142


>gi|225010649|ref|ZP_03701119.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           MS024-3C]
 gi|225005202|gb|EEG43154.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           MS024-3C]
          Length = 490

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+       E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAMAR-----EGGIGVLHKNMSIEAQALKVRKVKRAESGMIIDP 101

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  PL     DA   + E   G + +VD+  KL GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPLTATVKDAKDNMREFSIGGIPIVDKDHKLLGIVTNRDL--RFEKN-NARPISEVMT 158

Query: 291 KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V + E T L  A  +L+Q+ I  L V++   K +G++ F D+ + 
Sbjct: 159 SGELVTVAEGTSLAQAEDILQQNKIEKLPVINKDNKLVGLITFRDITKL 207


>gi|218248686|ref|YP_002374057.1| CBS domain-containing protein [Cyanothece sp. PCC 8801]
 gi|257061751|ref|YP_003139639.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
 gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
 gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
          Length = 153

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 30/130 (23%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------------------- 273
            PL +AI IL+EKR   + VVD+  KL G+I+E D+                        
Sbjct: 20  TPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLMWQETGVEPPPYIMILDSVIYLQN 79

Query: 274 -----RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAI 327
                +  HK L   +V +VM  +P  I     L  A Q++ +  I  L VVD+  ++ I
Sbjct: 80  PARYEKEIHKALGQ-TVGEVMSNHPISIKSSQSLREAAQIMHEKKIRRLPVVDETGKQVI 138

Query: 328 GIVHFLDLLR 337
           GI+   D++R
Sbjct: 139 GILTQGDIIR 148



 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM  N   +   T L+ A+++L +  IS L VVDD  K +G++   DL+
Sbjct: 5   VADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLM 56


>gi|116753656|ref|YP_842774.1| signal-transduction protein [Methanosaeta thermophila PT]
 gi|116665107|gb|ABK14134.1| putative signal-transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 120

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 7/105 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNP 293
           +IDAI +++    GCV V + G  ++++GI+T   IF+       D   +SV D+M   P
Sbjct: 14  VIDAIKLMASGPKGCVIVAEGGLLKEVEGIVTTSRIFKKVFAAGLDPANVSVADIMTPAP 73

Query: 294 KVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V +     T  A +L+ +HNI  L VV D    +GI+   DLL+
Sbjct: 74  LVTISPEATTREAAELMVRHNIRRLPVVKD-GVLVGIITSKDLLQ 117


>gi|194335676|ref|YP_002017470.1| Nucleotidyl transferase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308153|gb|ACF42853.1| Nucleotidyl transferase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 352

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 54/99 (54%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
           ++ +   L + IT L++     V VV+E  +L+G I++GDI R   + LN +S +E ++ 
Sbjct: 12  ILPMSASLEEVITNLTKVSIKIVLVVNEAGELQGTISDGDIRRGLLRGLNLISPIESIIH 71

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            NP V+ E+       +L+  + I  + VVDD    +G+
Sbjct: 72  HNPLVVTEELGREAVRKLMVVNKIQQVPVVDDQHHIVGL 110


>gi|311069425|ref|YP_003974348.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
 gi|310869942|gb|ADP33417.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
          Length = 439

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK F    G   VVD   K+ GI+T  DI  +      +  +E VM KNP  +
Sbjct: 208 DKLEKWYEKNFETGHGRFPVVDHQMKIHGILTSKDIAGHDR----SAPIEKVMTKNPVTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL V D  QK IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVTDKHQKLIGMISRQDVLK 304


>gi|213962709|ref|ZP_03390970.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sputigena
           Capno]
 gi|213954704|gb|EEB66025.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sputigena
           Capno]
          Length = 489

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 78/196 (39%), Gaps = 24/196 (12%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  ++             P  SA M      A+AIA+       E  
Sbjct: 15  DDVLLIPNYSEVLPREVSITSHFTRNITLNVPIISAAMDTVTEAAMAIAMAR-----EGG 69

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL----IDAITILSEKRFGCVAVVDE 259
             VLH    +         V  +   + +  +  PL     DA   + E   G + +VD+
Sbjct: 70  IGVLHKNMTIEEQAKQIRKVKRAESGMIIDPVTLPLNSKVSDAKRCMKENSIGGIPIVDD 129

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              LKGI+T  D+   F  D N    E +  KN  +  E T +  A  +L++  +  L V
Sbjct: 130 NGILKGIVTNRDL--RFEHDNNRPITEVMTSKNLVIANEGTSMKEAEGILQRSKVEKLPV 187

Query: 320 VDDCQKAIGIVHFLDL 335
           VD   K +G++ F D+
Sbjct: 188 VDKNYKLVGLITFRDI 203


>gi|90021345|ref|YP_527172.1| acetoin utilization protein AcuB [Saccharophagus degradans 2-40]
 gi|89950945|gb|ABD80960.1| CBS domain protein [Saccharophagus degradans 2-40]
          Length = 133

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 12/92 (13%)

Query: 259 EGQKLKGIITEGDIFRNFH----------KDLNTLS--VEDVMIKNPKVILEDTLLTVAM 306
           E  KL G++++ D+ RN            KD  TLS   + +M K P  I  D  +  A 
Sbjct: 39  EADKLIGVVSDRDVLRNISPFVNTKAEEAKDTFTLSRQAKQIMSKKPVTIRVDRPVREAG 98

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L+ +  +S+L VVD+ ++ IG++ + D++RF
Sbjct: 99  KLMLEKKVSLLPVVDENEQLIGVLSWKDVMRF 130


>gi|332796598|ref|YP_004458098.1| signal-transduction protein [Acidianus hospitalis W1]
 gi|332694333|gb|AEE93800.1| signal-transduction protein [Acidianus hospitalis W1]
          Length = 239

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I++ K  G + VV  G  ++GIITE D+ R    D+N+  V+D+M KNP +I  
Sbjct: 76  LKEACRIVTAKGIGSL-VVGNGDNIEGIITERDLIRYCKADINSF-VQDIMNKNPLIISA 133

Query: 299 DTLLTVAMQLLRQH 312
           DT L   ++ ++Q 
Sbjct: 134 DTTLAEVVEFMKQK 147


>gi|134084625|emb|CAK97501.1| unnamed protein product [Aspergillus niger]
          Length = 609

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L    ++V ++M
Sbjct: 59  IKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEIM 118

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 119 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 159


>gi|71909600|ref|YP_287187.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Dechloromonas aromatica RCB]
 gi|71849221|gb|AAZ48717.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Dechloromonas aromatica RCB]
          Length = 1665

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 5/129 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           L +  +D +  G + P +     L +A+  +   R  CV VVD G++ +GI+TE DI R 
Sbjct: 127 LHLNTADTLMEG-TFPRLPASAALDEALVAMETVRGSCVIVVD-GRRPQGIVTEHDIVRL 184

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH---F 332
           F    +  ++  VM      + ED  L  A Q +  H I  L VVD      G++     
Sbjct: 185 FLSSESNPTLGSVMTHPTISVREDCPLADAAQQMLDHGIRHLTVVDSDGNLAGLLSEHTL 244

Query: 333 LDLLRFGII 341
           +  L+ G+I
Sbjct: 245 MSPLKLGLI 253


>gi|42519998|ref|NP_965913.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42409735|gb|AAS13847.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 494

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 104 EAISLMREHNYSGIPVVDQ-RKLVGILTNRDM--RFIEDQNMNVKVSEVMTKDKLVTVRE 160

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 161 QGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 201



 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 17/113 (15%)

Query: 233 VKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PLI  A+  ++E  F  +A+   G    GI   G I +N   D   L V      
Sbjct: 34  IELNIPLISSAMDTVTESGF-AIAIAQHG----GI---GCIHKNLSIDEQVLEVRRVKKY 85

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E  ++ NP  I +D  +  A+ L+R+HN S + VVD  +K +GI+   D +RF
Sbjct: 86  ESWIVYNPITISQDKTVAEAISLMREHNYSGIPVVDQ-RKLVGILTNRD-MRF 136


>gi|303244867|ref|ZP_07331194.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484744|gb|EFL47681.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 399

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 2/104 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP 293
             P++DA+  + +       +VDE  KL GIIT+ DI +   +   L  + V  +M ++P
Sbjct: 78  NTPVMDAVCEILDCGQRAAPIVDEKGKLVGIITDYDIMKRAGESELLKDVKVTKIMSRSP 137

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I +D  +  A  L+R++NI  L+V+D      GIV   D++R
Sbjct: 138 ITIDKDESIGKARSLMRKYNIGRLIVLDKEGNPTGIVTEDDIIR 181


>gi|255531497|ref|YP_003091869.1| inosine-5'-monophosphate dehydrogenase [Pedobacter heparinus DSM
           2366]
 gi|255344481|gb|ACU03807.1| inosine-5'-monophosphate dehydrogenase [Pedobacter heparinus DSM
           2366]
          Length = 489

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  I+ + + G + V+D   KL GIIT  D+   F KD+     E +  +N     E T
Sbjct: 112 DAFQIMKDFKIGGIPVIDADNKLVGIITNRDL--RFQKDMQRKVSEVMTRENLITAPEGT 169

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A ++L+ + I  L V+D      G++ F D+ ++
Sbjct: 170 TLLQAEEILQDYKIEKLPVIDAQGHLAGLITFKDIQKY 207


>gi|313157911|gb|EFR57317.1| inosine-5'-monophosphate dehydrogenase [Alistipes sp. HGB5]
          Length = 500

 Score = 46.6 bits (109), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LED 299
           DA+ ++ E + G + VVD+   L GI+T  D+   F +D+    +E+VM    ++I    
Sbjct: 120 DALNLMRENKIGGIPVVDDDNILIGIVTNRDL--RFQRDM-MRRIEEVMTPGDRLITTHS 176

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L+ A ++L    I  L VVDD    +G++ + D+ +
Sbjct: 177 TELSHASEVLLNSKIEKLPVVDDKGHLVGLITYKDITK 214


>gi|295659197|ref|XP_002790157.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb01]
 gi|226281862|gb|EEH37428.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb01]
          Length = 671

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V DE +++ GI T  D+ FR     +    +++ ++M
Sbjct: 105 IKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 164

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 165 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 205


>gi|218439644|ref|YP_002377973.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
 gi|218172372|gb|ACK71105.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
          Length = 873

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 58/130 (44%), Gaps = 28/130 (21%)

Query: 228 DSIPL-VKIGCPLIDAITILSEKRF----------------GCVAVVD-----EGQKLKG 265
           D  PL V    P+ID I ++ E R                 GC   VD     EG++LKG
Sbjct: 18  DFTPLKVSPQTPIIDVIALMGEVRHRSCDLINSNLIPSSSSGCCERVDCALIMEGEELKG 77

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-----EDTLLTVAMQLLRQHNISVLMVV 320
           I TE D+ R    D+N        +   KVI        T+ TV + LLRQH I  L +V
Sbjct: 78  IFTEQDLVRVAAMDINLSETPIARVMTQKVITLTHCQTQTIFTV-LSLLRQHKIRHLPIV 136

Query: 321 DDCQKAIGIV 330
           +D  + +G++
Sbjct: 137 NDRGELVGLI 146


>gi|170290719|ref|YP_001737535.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174799|gb|ACB07852.1| putative signal-transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 144

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT-LSVEDVMI 290
           +K+   + +A  I+ EKR   + VVD   KL GI T+ D+ F   +  +   + +  +M 
Sbjct: 25  IKMDASVEEAAKIMDEKRISSILVVDNNGKLVGIFTDRDLRFAAANGKIGKGIPIHMLMT 84

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +NP  I  +  +T A++ +R  ++  L VVD   K +G++   D+L
Sbjct: 85  ENPITIAPNEPITEALRKMRDADVKHLPVVDKENKPVGVIAVRDVL 130


>gi|119944050|ref|YP_941730.1| signal protein [Psychromonas ingrahamii 37]
 gi|119862654|gb|ABM02131.1| signaling protein with a cAMP-binding site and CBS domains
           [Psychromonas ingrahamii 37]
          Length = 614

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILED 299
           A  ++S+KR   + VVD+ +KL GI+T+ D+  R   K LN  L V  +M K+P +I  +
Sbjct: 171 AALLMSKKRLSSLVVVDQ-EKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPN 229

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+  AM  + ++NI  L VV +  + IGI+   DL+R
Sbjct: 230 ALMFEAMLKMSENNIHHLPVVREG-RPIGIITSTDLIR 266


>gi|315638129|ref|ZP_07893312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           JV21]
 gi|315481809|gb|EFU72430.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           JV21]
          Length = 484

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + +A+ +++E R   V VVDE +KL GI+T  D+   F  + N   VE+VM K P +   
Sbjct: 105 IYEALELMAEYRISGVPVVDEERKLLGILTNRDL--RFESNFNN-RVENVMTKAPLITAP 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   L  A ++   + +  L +VD+  + +G++   DL +
Sbjct: 162 KGCTLDDAEKIFSTNKVEKLPIVDENNRLVGLITIKDLKK 201


>gi|320457561|dbj|BAJ68182.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 528

 Score = 46.2 bits (108), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 95/243 (39%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 17  DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTREIV 67

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 68  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 114

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+      D
Sbjct: 115 KRSESGMITDPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDD 174

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+DVM K      P  I +D     A +LL QH +  L +VDD  +  G++   D
Sbjct: 175 YDTLKVKDVMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDDEGRLTGLITVKD 230

Query: 335 LLR 337
            ++
Sbjct: 231 FVK 233


>gi|255935165|ref|XP_002558609.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583229|emb|CAP91233.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 615

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     L    +SV ++M
Sbjct: 59  IKPSMSIAEAAQLMAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGLGLKAREVSVAEIM 118

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 119 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 159


>gi|190570948|ref|YP_001975306.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|190357220|emb|CAQ54638.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 495

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +A++++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 107 EAVSLMREYNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNIKVSEVMTKDKLVTVRE 163

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL  + I  L+VVD+    IG++   D+ ++
Sbjct: 164 QAVNSASAMKLLHANRIEKLLVVDENSCCIGLITVKDIEKY 204


>gi|305663736|ref|YP_003860024.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304378305|gb|ADM28144.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 127

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 61/102 (59%), Gaps = 7/102 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +A  I+     G + +VD+  KL GI+TE DI R   + +   + V+ +M  + K+I+ D
Sbjct: 21  EASKIMDGNNIGSLPIVDDNGKLIGIVTERDIVRAISRGVKLDIPVKHIM--STKLIVAD 78

Query: 300 ---TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ++++A++++ ++NI  + +VD+  K IGI+   D+LR+
Sbjct: 79  RDENIVSIAIKMI-ENNIRHIPIVDNDHKLIGIISIRDVLRY 119


>gi|292656511|ref|YP_003536408.1| CBS domain pair [Haloferax volcanii DS2]
 gi|291371699|gb|ADE03926.1| CBS domain pair, putative [Haloferax volcanii DS2]
          Length = 380

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 46/85 (54%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V EG+K  GIIT+  I      +L+ L+VE +   +   + E   L  A+  LR+H 
Sbjct: 93  VAPVYEGEKQYGIITQDAILEAVLDNLDALTVEQIYTDDVVTVGERDHLGQAINRLREHG 152

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +S L VV+D  +  GI+   DL+ F
Sbjct: 153 VSRLPVVNDEGRLEGILTTYDLVEF 177


>gi|110636621|ref|YP_676828.1| inosine-5'-monophosphate dehydrogenase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279302|gb|ABG57488.1| inosine-5'-monophosphate dehydrogenase [Cytophaga hutchinsonii ATCC
           33406]
          Length = 490

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ I+ + + G + V+D+ ++L GI+T  D+   F K++N    + + + N     E
Sbjct: 110 LKDALKIMKDFKIGGIPVLDKNKRLVGILTNRDL--RFQKNVNKPISKIMTVTNLVTAPE 167

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L  A ++L+++ I  L +VD   K  G++ + D+L+
Sbjct: 168 GIDLAKAEEILQKYKIEKLPIVDKQGKLKGLITYRDILK 206


>gi|213019464|ref|ZP_03335270.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212994886|gb|EEB55528.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 492

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 58/101 (57%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +A++++ E  +  + VVD+ +KL GI+T  D+   F +D N  + V +VM K+  V + +
Sbjct: 104 EAVSLMREYNYSGIPVVDQ-RKLVGILTNRDV--RFIEDQNMNIKVSEVMTKDKLVTVRE 160

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  A  M+LL  + I  L+VVD+    IG++   D+ ++
Sbjct: 161 QAVNSASAMKLLHANRIEKLLVVDENSCCIGLITVKDIEKY 201


>gi|294632273|ref|ZP_06710833.1| CBS domains protein [Streptomyces sp. e14]
 gi|292835606|gb|EFF93955.1| CBS domains protein [Streptomyces sp. e14]
          Length = 134

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-- 278
           DVM  G  +  V+    L++A  ++  +  G V V D GQ++ G++T+ DI  R   +  
Sbjct: 12  DVMTPG--VVAVRPDASLVEAARLMRAQDIGGVVVAD-GQEVVGVLTDRDIAVRAVAEGL 68

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T+S   V   +P V+     L  A+ L+R+H++  L VV+D    +G+V   DL
Sbjct: 69  DPQTVSARAVCTPDPLVVGPQDPLRAAVTLMREHSVRRLPVVEDGMP-VGMVSLSDL 124


>gi|167629225|ref|YP_001679724.1| hypothetical protein HM1_0848 [Heliobacterium modesticaldum Ice1]
 gi|167591965|gb|ABZ83713.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 999

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 10/121 (8%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           C S  +H  D+   +K+      A  I++ +R   + ++D   K  GI+TE D+ R F +
Sbjct: 161 CMSTTLHRTDASTDIKV------AFAIMNAQRLSSL-LIDRHGKTVGILTERDVVR-FMR 212

Query: 279 DLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +L  S+ +VM  +P  + ++  L  A +++ QH I  L+V D   +  G+V   D++
Sbjct: 213 SGRSLDSSITEVMSPSPMTVSQEVSLFEAARIMEQHRIRRLLVRDPEGRICGMVSHSDIV 272

Query: 337 R 337
           R
Sbjct: 273 R 273


>gi|227831168|ref|YP_002832948.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580053|ref|YP_002838453.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581286|ref|YP_002839685.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998666|ref|YP_003420434.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457616|gb|ACP36303.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228010769|gb|ACP46531.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012002|gb|ACP47763.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446562|gb|ADB88064.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 277

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDT 300
           A+ I+  + FG + VVD   K  GIITE + F   +KDL+ +  V+  M    + I +D 
Sbjct: 96  ALNIMVTRNFGSLPVVDINDKPVGIITERE-FLLLYKDLDEIFPVKVFMSTKVRTIYKDV 154

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A++L+ +     L V+DD  K +GI+  ++ +R
Sbjct: 155 RLDQAVRLMLRRGFRRLPVIDDDNKVVGIITVVNAIR 191


>gi|171185956|ref|YP_001794875.1| CBS domain-containing protein [Thermoproteus neutrophilus V24Sta]
 gi|170935168|gb|ACB40429.1| CBS domain containing membrane protein [Thermoproteus neutrophilus
           V24Sta]
          Length = 282

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 10/115 (8%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTL 283
           S+   K   P+ + I++     FG + +VDE  +L GI TE D+ +     +F   +  +
Sbjct: 90  SVITAKPDTPVGEVISLFLRHNFGSMPIVDEAGRLLGIFTEWDVLKIASELDFPHRVRDV 149

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  P   + D L  + +   R++ I     VD+  K + ++H  DLLRF
Sbjct: 150 MTRIVYVLTPYSTVMDVLEGITIYKFRRYPI-----VDETGKVVAMLHAKDLLRF 199


>gi|325282685|ref|YP_004255226.1| inosine-5'-monophosphate dehydrogenase [Deinococcus proteolyticus
           MRP]
 gi|324314494|gb|ADY25609.1| inosine-5'-monophosphate dehydrogenase [Deinococcus proteolyticus
           MRP]
          Length = 502

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ E +   V + D   +L+GIIT  D+   F  DLNT  ++DVM K   + +   
Sbjct: 126 DADRLMGEYKISGVPITDAAGRLQGIITNRDM--RFVDDLNT-PIQDVMTKEELITVPVG 182

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++ + H I  L+V D+     G++   DL +
Sbjct: 183 TTLEQAREIFKGHRIEKLLVTDEEGHLRGLITIKDLTK 220


>gi|283954622|ref|ZP_06372140.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793814|gb|EFC32565.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 485

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDT 300
           A+ I++E R   V VVDE QKL GI+T  D+   F  D + L VE+VM K P +   +  
Sbjct: 108 ALEIMAEYRISGVPVVDENQKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKGC 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 165 TLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|70725741|ref|YP_252655.1| hypothetical protein SH0740 [Staphylococcus haemolyticus JCSC1435]
 gi|68446465|dbj|BAE04049.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 290

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT---RDDLIIVLSWS 121
             + I G G S    + L   L+  G     V   + +H    M++   ++D ++ ++ +
Sbjct: 130 NNIFIFGYGASYVCATDLYQKLSRIGLN---VQLVQETHLFTTMLSTHDKEDCVLFITNN 186

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G   EL+A++     ++IP+I I+S   + VA H+DIVLT     E+    +  TTS   
Sbjct: 187 GDQSELRAMVKVVSDYNIPIITISSSEHNHVAQHSDIVLTYGHSDEN-ELRMGATTSLFA 245

Query: 182 QLAIGDAL 189
           Q+   D L
Sbjct: 246 QMFTIDVL 253


>gi|325479353|gb|EGC82449.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 483

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-L 297
           L DA+ I++  R   V +VD+   LKGI+T  D+   F +D  TL ++ +M K   V+  
Sbjct: 105 LQDALDIMANYRISGVPIVDKEMYLKGILTNRDV--RFEED-PTLQIDSIMTKENLVVGY 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E   +  A++L+ +  I  L +VDD  K  G++   D+ +
Sbjct: 162 EGIKMKEAIKLMEEAKIEKLPIVDDDYKLKGLITIKDIEK 201


>gi|291619764|ref|YP_003522506.1| RpiR [Pantoea ananatis LMG 20103]
 gi|291154794|gb|ADD79378.1| RpiR [Pantoea ananatis LMG 20103]
          Length = 286

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/151 (24%), Positives = 72/151 (47%), Gaps = 4/151 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GI  SG +    A  L   G  SF ++ A  +  + +  + R D++I+++   + 
Sbjct: 135 QVAIFGINASGILADYSARLLNRIGLASFSLNRAGIALAEQMLALQRGDVLIMMAQKSAH 194

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK--EPESCP-HGLAPTTSAIM 181
            E   ++  A+R  +P+I +T+   S  A  AD+V+ +P+  E    P HG       +M
Sbjct: 195 REGSTVVREAKRLGVPIILLTNATDSFFAREADVVINVPRGGEKGRIPLHGTVMVCLEMM 254

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGK 212
            L++  +L    +++    ++ +  L P  K
Sbjct: 255 ILSVASSLPDRTVKTMKRLQDLYRGLKPAAK 285


>gi|87312318|ref|ZP_01094414.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
           3645]
 gi|87284963|gb|EAQ76901.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
           3645]
          Length = 174

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           PL D +T+LS    G V + D+  +  GI +E D        ++D  +  +   M  +P+
Sbjct: 59  PLGDVLTVLSTNAIGAVVITDDHHRPIGIFSERDALLRLGPDYRDHLSTPISHFMTPDPQ 118

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++T +T A+  +   +   L VVDD  +   ++   DLLR+
Sbjct: 119 SVDKNTPITFAVHQMDVGHYRHLPVVDDEGRVKAVISIRDLLRY 162


>gi|15897070|ref|NP_341675.1| hypothetical protein SSO0110 [Sulfolobus solfataricus P2]
 gi|284173415|ref|ZP_06387384.1| hypothetical protein Ssol98_01997 [Sulfolobus solfataricus 98/2]
 gi|1707784|emb|CAA69582.1| orf c04012 [Sulfolobus solfataricus P2]
 gi|13813241|gb|AAK40465.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601725|gb|ACX91328.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 300

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 47/82 (57%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+++ +K+ GI+T  DI + F +   T  V D M  N   I E+  L  A++ +  +N+ 
Sbjct: 208 VINQDEKVVGILTTADIIKAFFEGNYTAKVSDYMKTNVISINENEDLLDAIRKMIIYNVG 267

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L+V+D   KA+GIV   D+LR
Sbjct: 268 RLLVLDSNNKAVGIVTRTDILR 289


>gi|291279952|ref|YP_003496787.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
           SSM1]
 gi|290754654|dbj|BAI81031.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
           SSM1]
          Length = 640

 Score = 46.2 bits (108), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDVMIKNPKVILED 299
           +++ K  G V V D   KL GIITE D+      R     L     +DVM  NP VI  D
Sbjct: 186 VMTLKGIGSVLVCDGVGKLLGIITERDLVTKVLAREIGVCLRDTKAKDVMTPNPFVISPD 245

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  A   +  H I  L VV++  K +GIV   DLLRF
Sbjct: 246 SYMYEAAAFMISHGIRHLPVVENG-KILGIVTVRDLLRF 283


>gi|325969379|ref|YP_004245571.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta moutnovskia 768-28]
 gi|323708582|gb|ADY02069.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta moutnovskia 768-28]
          Length = 204

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V++ G G+SG +G   A  L   G  S+ +   E     +G     DL++ +S SG++ 
Sbjct: 46  KVLVVGAGRSGLVGRAFAMRLMHLGFRSYVL--GETITPSVG---EGDLVVAISGSGTTT 100

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            + A    A+R    +IAITS   S +A +AD+V+ +P
Sbjct: 101 MVVAAAEAAKRMKAMIIAITSYRDSPLASYADLVVQVP 138


>gi|288553260|ref|YP_003425195.1| RpiR transcriptional regulator [Bacillus pseudofirmus OF4]
 gi|288544420|gb|ADC48303.1| RpiR transcriptional regulator [Bacillus pseudofirmus OF4]
          Length = 284

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 11/161 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + +LE +L    S  +  AV  I   + RV   G G SG I          TG P+ 
Sbjct: 105 KSNIRTLEDTLHVIESDHYKKAVHAIVNAR-RVEFYGNGGSGIIALDAHHKFLRTGIPTA 163

Query: 95  FVHAAEASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
              A + SH  +     +T++D+++++S SG++ ++  +L  A       I IT+  KS 
Sbjct: 164 ---AYQDSHFQVMSASQLTKEDVVVLISHSGTNRDILQVLDVAEEHGATTICITTLAKSP 220

Query: 152 VACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           ++   DI L T+ KE E     LA   S + QL+I DAL +
Sbjct: 221 LSRQVDIPLYTVSKETEYRSEALA---SRLAQLSIIDALYV 258


>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Pseudonocardia sp. P1]
          Length = 282

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 7/132 (5%)

Query: 211 GKLGTLFVCA---SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           G++G   V +   SDVM  G  +  V  G  L +A  +L   R+  V VVD+  +L G++
Sbjct: 152 GRVGGRPVSSLRVSDVMTDGGLV-AVPPGLALDEAAEVLLSYRYTAVPVVDDDDRLLGVV 210

Query: 268 TEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +E D+        +     +V  VM  + + +     L  A QLL +    V+ VVDD  
Sbjct: 211 SEADLMAGSTYGGRRTRASTVAGVMTYDVETVHPGDPLADAEQLLAERGFRVIPVVDDDG 270

Query: 325 KAIGIVHFLDLL 336
             +G++   DLL
Sbjct: 271 VLVGVISRSDLL 282



 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 4/122 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           + + A DVM   + +  V    PL  A   ++E RF  + VVD    L G+I+  D+ R 
Sbjct: 1   MVLRARDVMT--ERVVTVWADAPLSRAQERMAEARFSALPVVDRRFSLVGVISLVDVLR- 57

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            H+D    +V D M +    +   T +++    +R +    L+ V      +G++   DL
Sbjct: 58  -HRDDPNATVGDAMTEQVVTVQATTSVSIVAHRMRVYGELRLVPVVQRGGLLGVITRSDL 116

Query: 336 LR 337
           LR
Sbjct: 117 LR 118


>gi|171679826|ref|XP_001904859.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939539|emb|CAP64766.1| unnamed protein product [Podospora anserina S mat+]
          Length = 677

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     L    +++ ++M
Sbjct: 108 IKPATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAANVTIAEIM 167

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 168 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 208


>gi|315224236|ref|ZP_07866075.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea
           F0287]
 gi|314945784|gb|EFS97794.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea
           F0287]
          Length = 489

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 24/196 (12%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  ++             P  SA M      A+AIA+       E  
Sbjct: 15  DDVLLIPNYSEVLPREVSITSRFTRNITLNVPIISAAMDTVTEAAMAIAMAR-----EGG 69

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL----IDAITILSEKRFGCVAVVDE 259
             VLH    +         V  +   + +  +  PL     DA   + E   G + +VD 
Sbjct: 70  IGVLHKNMTIEEQAKQIRKVKRAESGMIIDPVTLPLNSKVSDAKRCMKENNIGGIPIVDA 129

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              LKGI+T  D+   F  D N    E +  KN  +  E T +  A  +L++  +  L V
Sbjct: 130 NGILKGIVTNRDL--RFEHDNNRPITEVMTSKNLVIANEGTSMKEAEGILQRSKVEKLPV 187

Query: 320 VDDCQKAIGIVHFLDL 335
           VD   K +G++ F D+
Sbjct: 188 VDKNYKLVGLITFRDI 203


>gi|325182347|emb|CCA16800.1| myosinlike protein putative [Albugo laibachii Nc14]
          Length = 2641

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 233  VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
            + +G  L+  +++  + +  CV +V E + L G++TE D+        +DL    V ++M
Sbjct: 1448 IDVGAKLLQLVSLFHQSQSPCV-IVCEKEDLCGVVTETDVANRMVGERRDLQIALVSEIM 1506

Query: 290  IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI-GIVHF 332
             K P  +   +  T A+ L+ +H +  L V D   K I G++HF
Sbjct: 1507 TKKPIWVSSQSSATDALNLMLEHRVHHLPVKDSITKQITGVLHF 1550



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 252  GCVAVVDEGQ----KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTV 304
            G   VVD  Q    K+ G++T  D+         D NT  V  VM  +P ++    LL  
Sbjct: 1963 GAALVVDRSQVEEPKIVGLLTPNDLLLRVIANKLDANTSKVSQVMSMDPTIVSSSMLLLD 2022

Query: 305  AMQLLRQHNISVLMVV---DDCQKAI 327
            A +L+ + N+S L VV   DD +K I
Sbjct: 2023 AFRLMYRENLSYLPVVRESDDSKKVI 2048


>gi|18313985|ref|NP_560652.1| hypothetical protein PAE3319 [Pyrobaculum aerophilum str. IM2]
 gi|18161560|gb|AAL64834.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 286

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVI 296
           PL   I    EKRF  + V+D+ ++  G++    +       +L T  V ++M++NP VI
Sbjct: 178 PLEAYIKYFVEKRFRGIPVIDDDKRPIGLLMASRVMDALANCNLKT-KVSNLMLRNPPVI 236

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ED  +  A++L+    I  L+VV+   K +GI+   D+L
Sbjct: 237 NEDEDIHEAIRLMVSSGIGRLLVVNSEDKLVGIITRTDIL 276


>gi|111023162|ref|YP_706134.1| inositol-5-monophosphate dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822692|gb|ABG97976.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
          Length = 507

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V DE  +L GIIT  D+   F  D N  +V +VM K P +  ++ +   VA+ L
Sbjct: 131 RISGLPVTDEAGQLVGIITNRDM--RFEVDQNR-AVSEVMTKAPLITAQEGVTAEVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGQGKLTGLITVKDFVK 216


>gi|298675258|ref|YP_003727008.1| homoserine O-acetyltransferase [Methanohalobium evestigatum Z-7303]
 gi|298288246|gb|ADI74212.1| homoserine O-acetyltransferase [Methanohalobium evestigatum Z-7303]
          Length = 489

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 60/118 (50%), Gaps = 4/118 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           SD+M   + I  +K G  + +A  ++ EK    + +V    KL G++T  DI ++    L
Sbjct: 372 SDIMI--EDIATIKEGISIDEAARVMFEKEITHLPLVSSDSKLVGLVTSWDISKSIA--L 427

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++E++M KN      D  +  A + +   +IS L V+D  ++ IG+V   D+ R 
Sbjct: 428 KSDNLEEIMTKNVVTARPDEPIEKAAEKMESKDISALPVIDKDRRVIGMVTSEDISRL 485


>gi|170086117|ref|XP_001874282.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651834|gb|EDR16074.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 700

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKV 295
           + +A  + + KR  CV VVD+ + L GI T  D+ +R   +  D +T  V  +M +NP V
Sbjct: 102 VAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVSQIMTRNPMV 161

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + T  T A+QL+   +   L V   C +   +V  LD+ +
Sbjct: 162 TRDSTSATEALQLMVSRHFRHLPV---CNEDGNVVGLLDITK 200


>gi|118431612|ref|NP_148203.2| hypothetical protein APE_1838.1 [Aeropyrum pernix K1]
 gi|116062936|dbj|BAA80842.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 135

 Score = 46.2 bits (108), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPK 294
            P+ + + ++  +      VVD+  +  GI TE D+ R      DL+   VE+ M +NP 
Sbjct: 21  TPVREVVKMMYTQGKSAAVVVDQDNRPIGIFTERDVVRVVATGGDLDA-PVEEYMTRNPV 79

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            + ++  LT A+ L+ +H +  L VVD   K +GI+
Sbjct: 80  AVRDNESLTKALALMIEHRVRHLPVVDQEGKLVGII 115


>gi|298506080|gb|ADI84803.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           KN400]
          Length = 476

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 1/97 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AIT L     G + +  EG +L G++T+GDI R   + ++     +DV  + P  +   
Sbjct: 144 EAITQLDRAGTGALVLCSEGDRLHGLLTDGDIRRAVLRGISLDAPCQDVASRRPVTVEPS 203

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                A+ L+ QH+I+ L VVDD  + +  +   DL+
Sbjct: 204 FSAAQALHLMNQHDINHLPVVDDTGRVVDFLLRRDLI 240



 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVI 296
           P+ +AI  L     G + V    +KL G++T+GD+ R   K ++      D+  + P + 
Sbjct: 19  PIAEAIAQLDRAGTGSLVVCSADKKLYGLLTDGDVRRALLKAVDMGAPCGDIANRKPVIT 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVD 321
               L   A++L+  H+I+ L V+D
Sbjct: 79  FVPLLPIEALRLMNHHDINHLPVLD 103


>gi|291336740|gb|ADD96279.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C1481]
          Length = 83

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 21/55 (38%), Positives = 34/55 (61%)

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           F+HA EA HGD+G+I  +D+II  S SG ++E+  ++   +     +I+IT   K
Sbjct: 7   FIHATEALHGDMGVINSNDIIIFYSNSGDTEEIVKLVPLLKVLKCKIISITGNKK 61


>gi|256425885|ref|YP_003126538.1| inosine-5'-monophosphate dehydrogenase [Chitinophaga pinensis DSM
           2588]
 gi|256040793|gb|ACU64337.1| inosine-5'-monophosphate dehydrogenase [Chitinophaga pinensis DSM
           2588]
          Length = 490

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVM-IKNPKVILE 298
           +A+ ++ E   G + +VD   KL GI+T  D+ F   HK L    V +VM  +N     E
Sbjct: 114 EALRLMKENSIGGIPIVDANSKLVGILTNRDLRFERNHKRL----VSEVMTTENLITAPE 169

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A ++L+Q+ I  L VV    K +G++ + D+L+
Sbjct: 170 GTDLKKAEKILQQNKIEKLPVVAKNGKLVGLITYRDILQ 208


>gi|56963521|ref|YP_175252.1| hypothetical protein ABC1756 [Bacillus clausii KSM-K16]
 gi|56909764|dbj|BAD64291.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 146

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 35/112 (31%), Positives = 57/112 (50%), Gaps = 9/112 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
           S D +  V++  PL  A+ +L +  +  + V+D   +L+G+I++  I      D      
Sbjct: 21  SADKVAHVQMNNPLQHALLVLIKSGYTAIPVLDASYRLRGLISKSLILDAMLGDEDFELE 80

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            L+TL+V +VM K+   I  D   + A+ LL  H  S L VVD+ Q   GI+
Sbjct: 81  RLSTLTVNNVMAKDVPCIRPDAPFSKALSLLINH--SFLCVVDEEQAFSGIL 130


>gi|312218371|emb|CBX98317.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
           maculans]
          Length = 666

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V DE  ++ GI T  D+ FR     +    +++E++M
Sbjct: 104 IKPNTTVAEAAQLMAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIM 163

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+     GI+
Sbjct: 164 TKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGIL 204


>gi|119871784|ref|YP_929791.1| signal transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673192|gb|ABL87448.1| putative signal transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 688

 Score = 45.8 bits (107), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 9/120 (7%)

Query: 224 MHSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--H 277
           + +GD++    I  P    L D + I++EK  G V VV++G +L G I+E D  +    +
Sbjct: 569 VSAGDAVARDPITVPPSATLRDVLKIMAEKNIGFVPVVEDG-RLVGGISESDFVQILLNN 627

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L+T  VE VM +    I +   +  A +L+ +HNI  L VV+D  + +G++   DLL+
Sbjct: 628 TPLDT-PVEKVMRRQLITIEKTRPVKEAAELMVKHNIRHLPVVEDG-RVVGVLSVRDLLK 685


>gi|238501480|ref|XP_002381974.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
 gi|220692211|gb|EED48558.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
          Length = 666

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    ++V ++M
Sbjct: 115 IKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIM 174

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 175 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 215


>gi|150401586|ref|YP_001325352.1| sugar isomerase (SIS) [Methanococcus aeolicus Nankai-3]
 gi|150014289|gb|ABR56740.1| sugar isomerase (SIS) [Methanococcus aeolicus Nankai-3]
          Length = 194

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 40/161 (24%), Positives = 69/161 (42%), Gaps = 18/161 (11%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           K+   ++ I GIG+SG +G   A  L   G  S F+  A         ++ +DL+IV+S 
Sbjct: 35  KSESSKIYIYGIGRSGFVGKAFAMRLMHLGFKSHFIGEATCP-----AVSNNDLLIVVSG 89

Query: 121 SGSS----------DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESC 169
           SG +          +++   L    +  I +I+IT  N   +   +D ++ L   E +  
Sbjct: 90  SGETYSIVNLLNKINKINNKLELKGKNKIKIISITHNNNCTLKELSDFIVNLAIDESDKT 149

Query: 170 PHGLAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
            +   P  +   ++A    D +   L+E  N SE D    H
Sbjct: 150 ENKCFPMGTLFEEIAFIYLDTIIYNLMEKLNISEEDMKKRH 190


>gi|46579457|ref|YP_010265.1| inosine-5`-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602992|ref|YP_967392.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris DP4]
 gi|46448871|gb|AAS95524.1| inosine-5`-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563221|gb|ABM28965.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris DP4]
 gi|311233273|gb|ADP86127.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris
           RCH1]
          Length = 485

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPK 294
           G  +  A+ +++E R   + VV E  KL GI+T  D+   F KDL T  V +VM  KN  
Sbjct: 103 GLTVRQALEVMAEYRVSGLPVV-ENDKLVGILTNRDV--RFVKDLETTCVSEVMTSKNLV 159

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   T L  A   L QH I  L+VVD   +  G++   D+
Sbjct: 160 TVPVGTTLEEAKHHLHQHRIEKLLVVDGNNRLQGLITMKDI 200


>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
 gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
           alaskensis RB2256]
          Length = 141

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTL 301
           +L++ R G V VVD G  + GI +E DI R   ++  +     ++DVM K+P     D  
Sbjct: 29  LLAQNRIGAVPVVD-GDAVVGIFSERDIVRLISSYGPEALDRRIDDVMTKSPITCAPDMA 87

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + VA+  + Q  I  L VV +  K +G V   DL+++ I
Sbjct: 88  VIVALSQMTQKRIRHLPVV-EGGKMVGFVSIGDLVKYRI 125


>gi|332796263|ref|YP_004457763.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332693998|gb|AEE93465.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 300

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 53/99 (53%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  IL ++      V+ EG+K+ GIIT  DI + F +      V D M  +   I +
Sbjct: 191 LKEASMILYKEGIRGAPVLGEGEKVLGIITTADIIKAFFEGKYDAKVSDYMKTDVITIRD 250

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +  A++ +  +N+  L+VVD  Q+ IGIV   D+L+
Sbjct: 251 EEDVLEAIRKMVIYNVGRLLVVDSMQRVIGIVTRTDILK 289


>gi|323440003|gb|EGA97718.1| transcriptional regulator [Staphylococcus aureus O11]
 gi|323443726|gb|EGB01339.1| transcriptional regulator [Staphylococcus aureus O46]
          Length = 290

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L     +D++I+++ +G+  E
Sbjct: 132 IFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDIVILITNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++++     + IP+I ITS   + VA  ++IVLT  K  E+  H +  TTS   Q+   
Sbjct: 192 MQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMH-MGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|317142635|ref|XP_001818994.2| CBS and PB1 domain protein [Aspergillus oryzae RIB40]
          Length = 666

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    ++V ++M
Sbjct: 115 IKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIM 174

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 175 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 215


>gi|84616861|emb|CAJ13755.1| conserved hypothetical protein [Desulfococcus multivorans]
          Length = 309

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 13/120 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           V I   + DA+ ++       + V+D G+KL GIIT+ D+ R    D            L
Sbjct: 92  VDIDAAMADAVKLMKTNDIHLLPVLD-GEKLSGIITDRDLKRASASDATALEMYELIYLL 150

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + + V D+M +    +  DT +  A ++L +  IS   VVDD  + +G++   DL R  I
Sbjct: 151 SKIRVSDIMTRKIITLAPDTTVEEAAEVLLKQKISGAPVVDDAGRLLGVITKSDLFRMLI 210


>gi|308050118|ref|YP_003913684.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307632308|gb|ADN76610.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ferrimonas balearica DSM 9799]
          Length = 615

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 6/111 (5%)

Query: 231 PLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS-VE 286
           P+  +G   P+ +A  ++   R   V VV +  +L GI+T+ D+  R   + +   S V 
Sbjct: 159 PVQSVGPFTPIQEAAQLMRASRISSVLVVQDN-RLLGIVTDRDLRNRVLAEGVPVDSPVS 217

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  NP  +   TL+  AM  + QHNI  L V DD +  +G+V   DL+R
Sbjct: 218 EVMTANPVSVPSQTLVFEAMLAMSQHNIHHLPVCDD-ETPVGVVTSTDLIR 267


>gi|291567579|dbj|BAI89851.1| two-component hybrid sensor and regulator [Arthrospira platensis
           NIES-39]
          Length = 1778

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +  E R  CV VV EG++L GI+T+GDI R     + L  L V +VM  +     E  L 
Sbjct: 56  VYGEARSSCVLVV-EGEQLVGILTQGDIIRLCTEKRPLEQLLVGEVMTASVLSWRESELS 114

Query: 303 TV--AMQLLRQHNISVLMVVDDCQKAIGIV---------HFLDLLRFGII 341
                + LLR++ I  L +VDD  + +G++         H +DLLR   +
Sbjct: 115 NFFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTV 164


>gi|134298173|ref|YP_001111669.1| glucosamine--fructose-6-phosphate aminotransferase
           [Desulfotomaculum reducens MI-1]
 gi|134050873|gb|ABO48844.1| glutamine--fructose-6-phosphate transaminase [Desulfotomaculum
           reducens MI-1]
          Length = 609

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 21/200 (10%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF--------QFHCAVEKIK 61
            VT       K       L+ I  + R   +L  +L+G +S         +     E+++
Sbjct: 235 EVTWDAEEAEKGGYEHFMLKEINEQPR---ALRDTLKGRISHAGDKVILDEIKMTPEEVQ 291

Query: 62  AIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            IK RV+IT  G + H   +G  +   L     P     A+E  + D  ++ +D L++V+
Sbjct: 292 NIK-RVIITACGTAYHAGLVGKYVIEQLVRV--PVEVDIASEFRYRD-PLVDKDTLVVVV 347

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + +  A L  ARR    ++AIT+   S VA  AD ++     PE     +A T +
Sbjct: 348 SQSGETADTLAALREARRRGARVVAITNVIASSVAREADDIIYTWAGPEIS---VASTKA 404

Query: 179 AIMQLAIGDALAIALLESRN 198
              QL     LA+ L + RN
Sbjct: 405 YTTQLVAMYLLALYLAQERN 424


>gi|330830490|ref|YP_004393442.1| nucleotidyl transferase [Aeromonas veronii B565]
 gi|328805626|gb|AEB50825.1| Nucleotidyl transferase [Aeromonas veronii B565]
          Length = 353

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/92 (34%), Positives = 52/92 (56%), Gaps = 5/92 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA+ +++E+      VVD+ + L G++T+GD+ R    +++ T SV  VM  NP  I   
Sbjct: 18  DALAVINEEALRVCLVVDDARHLLGVVTDGDVRRAILNNVSLTQSVTAVM--NPSPITVS 75

Query: 300 TLLTVA--MQLLRQHNISVLMVVDDCQKAIGI 329
             LT A  ++ +R  ++  L VVDD  K IG+
Sbjct: 76  AKLTRAQLLETMRARSVLSLPVVDDAGKLIGL 107


>gi|213691487|ref|YP_002322073.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213522948|gb|ACJ51695.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 517

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 65/231 (28%), Positives = 98/231 (42%), Gaps = 32/231 (13%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +  +T    ++ 
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTREIV 56

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS--------DVMHSGDS----IPL 232
           +   +  A +++   SE    +   GG +G L    S        DV+   +S     PL
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGG-IGVLHRNLSIDDQAAQVDVVKRSESGMITDPL 115

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +  +     + VVD+  KL GIIT  D+      D +TL V+DVM K
Sbjct: 116 TVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDDYDTLKVKDVMTK 175

Query: 292 N-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 P  I +D     A +LL QH +  L +VDD  +  G++   D ++
Sbjct: 176 ENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVK 222


>gi|88797922|ref|ZP_01113509.1| CBS-domain-containing protein [Reinekea sp. MED297]
 gi|88779119|gb|EAR10307.1| CBS-domain-containing protein [Reinekea sp. MED297]
          Length = 135

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 58/108 (53%), Gaps = 12/108 (11%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF--------RN----FHKDLNTLSVEDVMIKN 292
           I  +  F  + VV++  +LKGI+++ D+         RN    F   L  L+V DVM ++
Sbjct: 26  IFRKVSFHHLVVVNDHNELKGILSDRDMMAQIALWLDRNNGESFTDFLPRLTVGDVMTRD 85

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +T +  A  LL ++ IS L V+D  QK IGIV + DLL++ +
Sbjct: 86  VITVDAETPIDTASVLLLENRISSLPVIDVDQKVIGIVTWKDLLKYYV 133


>gi|325955035|ref|YP_004238695.1| inosine-5'-monophosphate dehydrogenase [Weeksella virosa DSM 16922]
 gi|323437653|gb|ADX68117.1| inosine-5'-monophosphate dehydrogenase [Weeksella virosa DSM 16922]
          Length = 486

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++ +     + V++E + L GIIT  DI   + K+++ L VEDVM K   +I  
Sbjct: 109 LSDAEELMMQYSISGLPVIEEDRSLVGIITNRDI--RYQKNMDQL-VEDVMTKE-NIITS 164

Query: 299 D--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T L  A ++L ++ I  L +VDD  K IG++   D+
Sbjct: 165 DINTDLDKAKEILLRNRIEKLPIVDDNNKLIGLITIKDI 203


>gi|146303620|ref|YP_001190936.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701870|gb|ABP95012.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 279

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 50/92 (54%), Gaps = 2/92 (2%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILE 298
           ++AITI+  + FG + VV+  ++  G++TE D    F  DL+ + SV   +      +  
Sbjct: 94  LEAITIMVTRNFGSLPVVNASRRPVGMVTERDFLLMFQ-DLDPMFSVSGFVTPRVNTVFR 152

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DTLL  A++++ +     L V D+  K +G+V
Sbjct: 153 DTLLEQAVRMMLRRGFRRLPVTDEDGKVVGMV 184


>gi|146299973|ref|YP_001194564.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
           UW101]
 gi|146154391|gb|ABQ05245.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
           UW101]
          Length = 490

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 71/168 (42%), Gaps = 11/168 (6%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M      A+AIA+ +     E    VLH    +         V  +   + +  
Sbjct: 47  PIVSAAMDTVTESAMAIAMAQ-----EGGIGVLHKNMTIEQQAAKVRKVKRAEAGMIIDP 101

Query: 235 IGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P    + DA   + E   G + +VDE + LKGI+T  D+   F K+      E +  
Sbjct: 102 VTLPTNSTIADAKNAMKEFGIGGIPIVDENKILKGIVTNRDL--RFEKNGARPIAEVMTS 159

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N   + E T L  A  +L+ H I  L VV+   + +G++ F D+ + 
Sbjct: 160 SNLVTVAEGTSLEQAEVVLQGHKIEKLPVVNAQNELVGLITFRDITKL 207


>gi|45358922|ref|NP_988479.1| hypothetical protein MMP1359 [Methanococcus maripaludis S2]
 gi|45047788|emb|CAF30915.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 513

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 229 SIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           S P+V   +   +  A  +L E     + +VDE  KL GIIT  DI +   +D +++S  
Sbjct: 395 SRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQDKHSIS-- 452

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M         D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 453 EIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504


>gi|20091538|ref|NP_617613.1| homoserine O-acetyltransferase [Methanosarcina acetivorans C2A]
 gi|19916693|gb|AAM06093.1| homoserine O-acetyltransferase [Methanosarcina acetivorans C2A]
          Length = 540

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 253 CVA---VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           CV+   V+ E  KL+GI+T  DI +     +N L  ++++ ++ K + ED  +  A  ++
Sbjct: 449 CVSHLPVISEDGKLEGIVTSWDITKAVACKINEL--DEIITRDVKYVYEDEKIEHASSIM 506

Query: 310 RQHNISVLMVVDDCQKAIGIV 330
            +H+IS L V+D   + IGIV
Sbjct: 507 EKHSISALPVIDSEHRIIGIV 527


>gi|23100262|ref|NP_693729.1| hypothetical protein OB2807 [Oceanobacillus iheyensis HTE831]
 gi|22778494|dbj|BAC14763.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G+SG IG      +   G  ++ V     ++     +  DDL+I+ S SG + 
Sbjct: 38  KIFVAGAGRSGFIGKSFVMRMMHMGIDAYAVGETVTAN-----LKEDDLLIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP----KEPESCPHGLAPTTSAIM 181
            L +I   A++    +  +T+  +S +   ADIV+ LP       ES    + P  S   
Sbjct: 93  TLVSIAEKAKKLRGTVAVVTTAPESTIGKLADIVVQLPGATKDRTESNYKTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  +   DAL +  +  +       Y  H
Sbjct: 153 QTMMLFYDALILQFMNKKGLDSQTMYGKH 181


>gi|313679341|ref|YP_004057080.1| inosine-5'-monophosphate dehydrogenase [Oceanithermus profundus DSM
           14977]
 gi|313152056|gb|ADR35907.1| inosine-5'-monophosphate dehydrogenase [Oceanithermus profundus DSM
           14977]
          Length = 489

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++ E + G + VVD   +L G++T  DI   F  DL+   V +VM    ++I  
Sbjct: 110 LEDADRLMGEYKIGGLPVVDFHGQLLGLVTNRDI--RFETDLSK-PVSEVMTPRERLITG 166

Query: 299 DTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +T+  A  +LR+H I  L +VDD  K  G++   DL++
Sbjct: 167 PPGMTLDEAEAVLRKHKIEKLPLVDDSGKLRGLLTLKDLVK 207


>gi|18312938|ref|NP_559605.1| hypothetical protein PAE1873 [Pyrobaculum aerophilum str. IM2]
 gi|18160433|gb|AAL63787.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 142

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 62/107 (57%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           +K G  ++DA  +++++  G + V  + ++ L G+I+E DI R     +  +  V+++M 
Sbjct: 14  IKPGASILDAAKLMAQRNIGFLIVSSDCKRDLAGVISERDIIRAIASGIQPSEPVDNIMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    + +DT +    +L+R++NI  ++V+D+ Q   G++   DLL+
Sbjct: 74  RKVVYVYKDTPVWEIARLMRKYNIRHILVMDNGQ-IFGVISIRDLLK 119


>gi|56961793|ref|YP_173515.1| inosine 5'-monophosphate dehydrogenase [Bacillus clausii KSM-K16]
 gi|56908027|dbj|BAD62554.1| inosine-5'-monophosphate dehydrogenase [Bacillus clausii KSM-K16]
          Length = 485

 Score = 45.8 bits (107), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  ++ + R   V +VDE QKL GI+T  D+   F +D  ++ ++DVM K   V   
Sbjct: 108 VFDAEHLMGKYRISGVPIVDEEQKLVGILTNRDL--RFIEDY-SIKIDDVMTKEGLVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A ++L+QH I  L +VDD     G++   D+ +
Sbjct: 165 VGTTLEQAEKILQQHKIEKLPLVDDNGILKGLITIKDIEK 204


>gi|218439348|ref|YP_002377677.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7424]
 gi|218172076|gb|ACK70809.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7424]
          Length = 903

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE  +L GII+  DI    H   +   V+  M +NPK I  +T L    +
Sbjct: 348 RYGHSGLSVVDEKDQLVGIISRRDIDLALHHGFSHAPVKGYMTRNPKTITPETSLPEIEE 407

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +++  L VV + Q  +GIV   D+LR
Sbjct: 408 LMVTYDLGRLPVVKNEQ-LLGIVTRTDVLR 436


>gi|242399451|ref|YP_002994876.1| hypothetical protein TSIB_1476 [Thermococcus sibiricus MM 739]
 gi|242265845|gb|ACS90527.1| hypothetical protein TSIB_1476 [Thermococcus sibiricus MM 739]
          Length = 284

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 85/179 (47%), Gaps = 21/179 (11%)

Query: 180 IMQLAIGDALAIALLESRNFSENDF--YVLH--PGGKLGT-----LFVCASDVMHSGDS- 229
           +  L   D + I L  +RN++ + F  Y +   P  K GT     +    S ++H  +  
Sbjct: 5   VKNLMTPDPVVIELPATRNYALDLFKRYKVRSFPVVKRGTKEIVGIVSIKSVLLHPDEDQ 64

Query: 230 --------IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HK 278
                   +PLV     L  A+ ++ + ++  V VVD+   + GI+T GDI R +   ++
Sbjct: 65  LAMLIKRDVPLVTPNDALKKAVKLILKNKYRRVVVVDKENHVVGILTVGDIIRRYLSKNE 124

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + ++ ++    K+  V+ + T L  A++ L   N  VL V+DD    IGI+   DLL+
Sbjct: 125 KMKSIEIKPYYQKHVSVVWKGTPLKAALKALLLSNAMVLPVIDDDGSLIGIIDETDLLK 183


>gi|256818863|ref|YP_003140142.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea DSM
           7271]
 gi|256580446|gb|ACU91581.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea DSM
           7271]
          Length = 489

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 51/196 (26%), Positives = 77/196 (39%), Gaps = 24/196 (12%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  P  ++             P  SA M      A+AIA+       E  
Sbjct: 15  DDVLLIPNYSEVLPREVSITSRFTRNITLNVPIISAAMDTVTEAAMAIAMAR-----EGG 69

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL----IDAITILSEKRFGCVAVVDE 259
             VLH    +         V  +   + +  +  PL     DA   + E   G + +VD 
Sbjct: 70  IGVLHKNMTIEEQAKQIRKVKRAESGMIIDPVTLPLNSKVSDAKRCMKENNIGGIPIVDA 129

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              LKGI+T  D+   F  D N    E +  KN  +  E T +  A  +L++  +  L V
Sbjct: 130 NGILKGIVTNRDL--RFEHDNNRPITEVMTSKNLVIANEGTSMKEAEGILQRSKVEKLPV 187

Query: 320 VDDCQKAIGIVHFLDL 335
           VD   K +G++ F D+
Sbjct: 188 VDKNYKLVGLITFRDI 203


>gi|256847707|ref|ZP_05553152.1| 6-phospho 3-hexuloisomerase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715396|gb|EEU30372.1| 6-phospho 3-hexuloisomerase [Lactobacillus coleohominis 101-4-CHN]
          Length = 280

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 51/97 (52%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + GIG SG+   + A  L   G P+F +  +         +  +D++I LS SGS+ 
Sbjct: 119 RVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESNMMTIASATMQDNDIVIALSVSGSTP 178

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           E+ + +  +R+    +IA+T+   S++   +D++  +
Sbjct: 179 EVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLFQI 215


>gi|331695746|ref|YP_004331985.1| putative signal transduction protein [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
           [Pseudonocardia dioxanivorans CB1190]
          Length = 144

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 61/120 (50%), Gaps = 5/120 (4%)

Query: 221 SDVMHS-GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +DV+ + G ++  V     + +A+  L + R G + V D   +++GI++E D+ R   + 
Sbjct: 4   ADVLDTKGRTVHSVVPWATVAEAVERLEKYRIGALLVSDGENRIRGIVSERDVIRELARR 63

Query: 280 LNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            N L   +VED+M +N   +     LT AM  + +     L VVD   + +G+V   DL+
Sbjct: 64  GNRLLSCNVEDIMTRNVATVSSTESLTYAMAQMTRGRYRHLPVVDGG-RLVGMVSIGDLV 122


>gi|299755073|ref|XP_001828409.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
           okayama7#130]
 gi|298411057|gb|EAU93401.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
           okayama7#130]
          Length = 719

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKV 295
           + +A  + + KR  CV VVDE + L GI T  D+ +R   +  D ++  V  +M +NP V
Sbjct: 137 VAEASQLCAAKRTDCVLVVDEEEGLSGIFTAKDLAYRVTAEGLDPHSTPVAQIMTRNPMV 196

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + T  T A+QL+   +   L V   C +   +V  LD+ +
Sbjct: 197 TRDTTSATEALQLMVSRHFRHLPV---CNEDGNVVGLLDITK 235


>gi|238796740|ref|ZP_04640246.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           mollaretii ATCC 43969]
 gi|238719471|gb|EEQ11281.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           mollaretii ATCC 43969]
          Length = 280

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 5/149 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E ++A + R+++TGIG SG +   LA  L   G  +       A    +  +   DL+
Sbjct: 123 ALEMLRAAR-RIILTGIGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLL 181

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLA 174
           + +S+SG   E+      A+R    ++A+TS + + +   AD  L T+ +EP      ++
Sbjct: 182 LAISFSGERREINLAAEEAQRCGAKVLALTSFSPNSLQQRADHCLYTISEEPAIRSAAIS 241

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSEND 203
            +T+   Q A+ D L +A+++    S  D
Sbjct: 242 SSTA---QYALTDLLFMAMIQQDLESAQD 267


>gi|186685040|ref|YP_001868236.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
 gi|186467492|gb|ACC83293.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
          Length = 1298

 Score = 45.8 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 32/90 (35%), Positives = 52/90 (57%), Gaps = 7/90 (7%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVIL---EDTLLTVAMQ 307
           C+ V++ G +L GI TE D+ R      DL+TL++ +VM + P V L   +   + +A+ 
Sbjct: 66  CIFVLEAG-RLLGIFTEKDVIRLIASGVDLSTLTMAEVMTQ-PVVTLRQSDSNDIFIALS 123

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LLRQH    L V++D  + +GI+    LL+
Sbjct: 124 LLRQHQTDYLPVLNDRGQLLGIITQTSLLQ 153


>gi|281356620|ref|ZP_06243111.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281316747|gb|EFB00770.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 497

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 8/96 (8%)

Query: 245 ILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           +++EKR     F    +VD+  KL GIIT  D    F  D N + + DVM K P V  + 
Sbjct: 116 MMNEKRVKKYSFSGFPIVDDNGKLVGIITSRDF--KFLSDYN-IRIRDVMTKEPVVAKDS 172

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A +++ +H +  L +V+   K  G+  FLD+
Sbjct: 173 ISMLQAYKMMVEHKVGKLPMVNSEGKLTGLYSFLDV 208


>gi|328951426|ref|YP_004368761.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451750|gb|AEB12651.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
           DSM 14884]
          Length = 556

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+   P+ +A  ++ E   GCV V D G+ L G++T+ D+  R   +  D     VE VM
Sbjct: 14  VRPEAPIAEACRLMEENNIGCVVVSDNGKPL-GLVTDRDLTLRVLRQGMDPKKTKVEQVM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +    + ED  L  A++ +R   I   +VV+D  +  GI    D++
Sbjct: 73  TREVLTLNEDMGLLEALEAVRGKPIRRFLVVNDKGELSGIFTLDDVM 119


>gi|83589984|ref|YP_429993.1| signal transduction protein [Moorella thermoacetica ATCC 39073]
 gi|83572898|gb|ABC19450.1| putative signal transduction protein with CBS domains [Moorella
           thermoacetica ATCC 39073]
          Length = 214

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 58/109 (53%), Gaps = 14/109 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------------E 286
           ++DA+ ++ + +   + V+ +G +L G++TE DI R      +TLSV            +
Sbjct: 20  VLDALELMKKNKIRRLPVIQDG-RLIGLVTERDILRVSPSPASTLSVFEVNYLVAKMTVK 78

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D MIK P  +  D  +  A  L+R+H I  L+V++  ++ +GI+   DL
Sbjct: 79  DAMIKRPVTVPPDMTIEEAALLMREHKIDNLLVMEK-ERLVGIITQTDL 126


>gi|46198372|ref|YP_004039.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
 gi|46195994|gb|AAS80412.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------LSVEDVMIKN 292
           L DA  ++ E R G + VVD   +L G++T  D+   F +DL          VE ++   
Sbjct: 108 LEDAERLMREYRIGGLPVVDVYGRLLGLVTNRDL--RFERDLKRPVTEVMTPVERLVTAR 165

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P   LE+     A +LLR+H +  L +VD+  +  G++   D+++
Sbjct: 166 PGTTLEE-----AEELLRRHKVEKLPLVDESGRLKGLITLKDIVK 205


>gi|57641561|ref|YP_184039.1| hypothetical protein TK1626 [Thermococcus kodakarensis KOD1]
 gi|57159885|dbj|BAD85815.1| hypothetical protein, conserved, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 280

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 75/170 (44%), Gaps = 14/170 (8%)

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---------SI 230
           ++QL      AI L   R      F V+   GKL  +      ++H  +          +
Sbjct: 13  VIQLPATREYAIELF--RKHKVRSFPVVGKDGKLVGIVSIKRVLLHPDEDQLAMLVKREV 70

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVED 287
           P VK    L  A+  + E  +  V VVD+  +  GI+T GDI R +   ++ L  +++E 
Sbjct: 71  PTVKANDDLKKAVKKMLEMDYRRVVVVDDENRPVGILTVGDIVRRYLSKNEKLKEVTIEP 130

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +N  V+   T L  A++ L   N   + V+DD    IG+V   DLLR
Sbjct: 131 YYQRNVSVVWRGTPLKAALKALLLCNAMAIPVIDDDGNLIGMVDETDLLR 180


>gi|111220602|ref|YP_711396.1| IMP dehydrogenase [Frankia alni ACN14a]
 gi|111148134|emb|CAJ59803.1| IMP dehydrogeanse [Frankia alni ACN14a]
          Length = 510

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 52/105 (49%), Gaps = 14/105 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP----- 293
           L DA  +++  R   V V +   +L GI+T  DI   F +D +   V+DVM + P     
Sbjct: 116 LEDANVLMARYRISGVPVTEPDGRLVGIVTNRDI--RFERDYSR-RVQDVMTRMPLITAP 172

Query: 294 -KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  ED     A++LLR+H I  L +VDD  +  G++   D  +
Sbjct: 173 VGVSPED-----ALELLRRHKIEKLPIVDDQGRLCGLITVKDFTK 212


>gi|148655071|ref|YP_001275276.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567181|gb|ABQ89326.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 162

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 12/116 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FR-------NFHKDL 280
           V +  P+ +A+ ++ E     + VV +  +L+GIIT+GDI      R       +    L
Sbjct: 31  VNLAAPVSEALALMREHNIRRLPVVIDTGELRGIITQGDIRGADLLRVAGMDPFDIADAL 90

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + V +VM ++P  +  +T L  A  L+ ++ I  L VVD+ +  +GI+   DL 
Sbjct: 91  RRIKVYEVMSEDPITVTPETSLREAAMLMIENKIGGLPVVDENRMVVGIITESDLF 146


>gi|55980401|ref|YP_143698.1| IMP dehydrogenase/GMP reductase [Thermus thermophilus HB8]
 gi|55771814|dbj|BAD70255.1| 'IMP dehydrogenase/GMP reductase [Thermus thermophilus HB8]
          Length = 493

 Score = 45.8 bits (107), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 13/105 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------LSVEDVMIKN 292
           L DA  ++ E R G + VVD   +L G++T  D+   F +DL          VE ++   
Sbjct: 108 LEDAERLMREYRIGGLPVVDVYGRLLGLVTNRDL--RFERDLKRPVTEVMTPVERLVTAR 165

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P   LE+     A +LLR+H +  L +VD+  +  G++   D+++
Sbjct: 166 PGTTLEE-----AEELLRRHKVEKLPLVDESGRLKGLITLKDIVK 205


>gi|209515410|ref|ZP_03264276.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. H160]
 gi|209504130|gb|EEA04120.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. H160]
          Length = 150

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 13/105 (12%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VEDVMIKN 292
           I  +  F  V VV E ++L+G++++ D+ R            H+D+ TLS  V  +M + 
Sbjct: 26  IFEQAGFHHVLVV-EDRRLEGVVSDRDLLRALSPFIDSVVETHRDVGTLSKRVHQIMSRK 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  +     +T A+QL   H IS + VVD   + +GIV + D+L+
Sbjct: 85  PITLEPHADVTEAIQLFLTHPISCIPVVDSEFRPVGIVSWRDVLK 129


>gi|67922052|ref|ZP_00515568.1| CBS:Polynucleotide adenylyltransferase [Crocosphaera watsonii WH
           8501]
 gi|67856268|gb|EAM51511.1| CBS:Polynucleotide adenylyltransferase [Crocosphaera watsonii WH
           8501]
          Length = 904

 Score = 45.8 bits (107), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE   L GII+  D+    H   +   V+  M KN K I  DTLL     
Sbjct: 347 RYGHSGLSVVDEKDHLVGIISRRDLDLALHHGFSHAPVKGYMTKNIKTINPDTLLPDIES 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +++  L V+DD  + +GIV   DLLR
Sbjct: 407 IMVTYDVGRLPVIDD-NRLLGIVTRTDLLR 435


>gi|331697570|ref|YP_004333809.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
 gi|326952259|gb|AEA25956.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
          Length = 284

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M +GD + + +   P  +A  +L+ +R   + VV  G +L G+I+E D+ R+      T 
Sbjct: 171 MTTGDLVTITE-DRPTEEAAALLTGRRLTSIPVVTAGDRLVGVISEADLLRDPLDGRRTG 229

Query: 284 SVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           S   V   M ++P V+  D  L  A  L+ +    +L VV    + +G++   DLL
Sbjct: 230 SPRTVGGAMTRDPVVVGPDDELARARALMAERGFRILPVV-QAGRLVGVLSRRDLL 284


>gi|227541807|ref|ZP_03971856.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227182250|gb|EEI63222.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 533

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 4/83 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQLLRQHNI 314
           VVDE  KL GI T  D+   F  D+N L V+DVM   P ++ ++++  + A++LL +H +
Sbjct: 160 VVDEKDKLLGICTNRDM--RFEPDMNRL-VKDVMTPMPLIVAKESVTKSEALKLLSEHRV 216

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +V D    +G++   D ++
Sbjct: 217 EKLPIVKDDNTLVGLITVKDFVK 239


>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 494

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 58/106 (54%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + DA+ ++ +   G + VVDE   L GI+T  D+   F   L+   +++VM  +
Sbjct: 105 IRRGRTVKDALDMMRDYHIGGIPVVDEDNCLVGIVTNRDL--RFEHRLDK-KIDEVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N  V  + T L  A Q+L+++ I  L VVD   + +G++ + D+ +
Sbjct: 162 NLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITK 207


>gi|314937102|ref|ZP_07844449.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis subsp. hominis
           C80]
 gi|313655721|gb|EFS19466.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis subsp. hominis
           C80]
          Length = 190

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 8/139 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G+SG++ +  A  L   G  +  +  A         I   DL+I++S SGS+D
Sbjct: 46  RIFTAGKGRSGYVANSFAMRLNQLGKDASAIGEATTPS-----IKEHDLLIIISGSGSTD 100

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ--- 182
            L+ +   A      +  IT++ +S +   AD V+ LP   +    G      ++ +   
Sbjct: 101 HLRLLAEKAHSVGAKIALITTKKESKIGDVADTVIALPAGTKHEAEGSEQPLGSLFEQSS 160

Query: 183 LAIGDALAIALLESRNFSE 201
           L   D++ I L+++ N +E
Sbjct: 161 LIFLDSVVIGLMDAFNINE 179


>gi|270159831|ref|ZP_06188487.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|289165411|ref|YP_003455549.1| hypothetical protein LLO_2078 [Legionella longbeachae NSW150]
 gi|269988170|gb|EEZ94425.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|288858584|emb|CBJ12465.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 146

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 64/124 (51%), Gaps = 8/124 (6%)

Query: 221 SDVMHSGDSIPLVKI-----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +D++H+   +P  KI        +I  I ++SE   G + VVD   +L GI++E DI R+
Sbjct: 2   ADLIHNALPVPRRKIIYIHPEDSVIKCINLMSEMDIGALVVVDNDNQLIGIVSERDIVRS 61

Query: 276 -FHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             HK  +L T  V DV+ K   ++  +  +  AMQ++       +++ D+  + I I+  
Sbjct: 62  CLHKCVNLETAKVSDVVYKEVMILSPNDHIEKAMQVITATKRRHVLIRDENNEFIAILSI 121

Query: 333 LDLL 336
            DLL
Sbjct: 122 GDLL 125


>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
 gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
          Length = 225

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV----------- 285
            PL  A+ I+ +  F  + VVD   KL G+ITEG +     K+  +LS+           
Sbjct: 18  TPLSKALEIMGKNHFHRLPVVDANHKLIGLITEGLVNDASGKNATSLSIYELNYLLSRTQ 77

Query: 286 -EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+MI++   I     L  A Q++ ++ ++VL VVD+    +GI+   D+ 
Sbjct: 78  AKDIMIRDVHTISPMVFLEEAAQVMLENAVNVLPVVDEENHVVGIITEKDIF 129


>gi|158333240|ref|YP_001514412.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158339481|ref|YP_001520658.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
 gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
          Length = 163

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 52/122 (42%), Gaps = 27/122 (22%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------------RNFHK 278
           I ++ + R   + VVD    + GII+EGD+                         + FH+
Sbjct: 29  IKLIEDHRISGMPVVDASNHVVGIISEGDLLVRESPMQPPLYMTLLGSVIYFESPKQFHQ 88

Query: 279 DLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +     + V+DVM   P     D  LT A  L+    I+ L VVD+ Q  IGI+   DL
Sbjct: 89  HMQKALGMLVQDVMTSQPITTKPDIPLTSAANLMLSKKINRLPVVDNDQYLIGIITRHDL 148

Query: 336 LR 337
           +R
Sbjct: 149 VR 150


>gi|228993039|ref|ZP_04152962.1| transcriptional regulator [Bacillus pseudomycoides DSM 12442]
 gi|228999089|ref|ZP_04158671.1| transcriptional regulator [Bacillus mycoides Rock3-17]
 gi|229006637|ref|ZP_04164271.1| transcriptional regulator [Bacillus mycoides Rock1-4]
 gi|228754498|gb|EEM03909.1| transcriptional regulator [Bacillus mycoides Rock1-4]
 gi|228760706|gb|EEM09670.1| transcriptional regulator [Bacillus mycoides Rock3-17]
 gi|228766687|gb|EEM15327.1| transcriptional regulator [Bacillus pseudomycoides DSM 12442]
          Length = 211

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKVKVQDYQSRPVVIDKNISVYDAICTMFLEDVGTLFVVDQATLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  VAM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDVAMELI-ERQIDAVP 180

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 181 VVKDTKQGLEVV 192


>gi|307544219|ref|YP_003896698.1| inosine-5'-monophosphate dehydrogenase [Halomonas elongata DSM
           2581]
 gi|307216243|emb|CBV41513.1| inosine-5'-monophosphate dehydrogenase [Halomonas elongata DSM
           2581]
          Length = 489

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 8/100 (8%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVIL 297
           L D + +  E  F    VV EG+ L GI+TE D+ F+  H D    SV D+M    K++ 
Sbjct: 106 LADLLAMAKEYGFSGFPVV-EGETLVGIVTERDMRFQPNHGD----SVADIMTPREKLVT 160

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             E T L+V    +++H +  ++VVD+  +  G+V F D+
Sbjct: 161 VAEGTELSVIKGKMQEHRVEKMLVVDNDFRLRGLVTFQDI 200


>gi|261403042|ref|YP_003247266.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
 gi|261370035|gb|ACX72784.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
          Length = 507

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 55/102 (53%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +++A  IL E     + +VD+  +L GIIT  DI +   +  N  ++E++M KN     E
Sbjct: 405 IMEAAKILIEYNINHLPIVDDLGRLVGIITSWDIAKALAQ--NKKTIEEIMTKNVITAHE 462

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FG 339
           D       + +  +NIS + VVDD ++ +G+V   D+ R FG
Sbjct: 463 DEPADHVARKMSINNISGVPVVDDHKRVVGVVTSEDISRLFG 504


>gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
           (cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
          Length = 159

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 28/128 (21%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------------RNFHKDL 280
            P+ +   IL E R   V V D G  L GI+TEGD+                  NF++ +
Sbjct: 18  TPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLVHRAADERLEPRESLWKENFYRSV 77

Query: 281 -----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                         + E VM +    +  D+ +TVA +LL  HNI  L V+ + ++ +G+
Sbjct: 78  FRRHTPEPDKAEGRTAEQVMTREVLTVAPDSNVTVAARLLADHNIKSLPVI-EHERLVGM 136

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 137 ISRFDLVK 144


>gi|238793767|ref|ZP_04637388.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia intermedia ATCC
           29909]
 gi|238726831|gb|EEQ18364.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia intermedia ATCC
           29909]
          Length = 295

 Score = 45.4 bits (106), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 23/135 (17%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEAS 102
           A E +K   GR++  G G SG +G   AS    T             G P   + A E +
Sbjct: 55  AAESLKQ-GGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGA 113

Query: 103 HGDLGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             D+ +  RD         D+++ L+ SG +  +   L YAR+   P  AI+    S +A
Sbjct: 114 EDDIALGVRDLQDLKLTATDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIA 173

Query: 154 CHADIVLTLPKEPES 168
             A + ++    PE+
Sbjct: 174 QEAQVAISPVVGPEA 188


>gi|229013517|ref|ZP_04170651.1| transcriptional regulator [Bacillus mycoides DSM 2048]
 gi|229061990|ref|ZP_04199316.1| transcriptional regulator [Bacillus cereus AH603]
 gi|229135122|ref|ZP_04263924.1| transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|229169045|ref|ZP_04296761.1| transcriptional regulator [Bacillus cereus AH621]
 gi|228614454|gb|EEK71563.1| transcriptional regulator [Bacillus cereus AH621]
 gi|228648351|gb|EEL04384.1| transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|228717299|gb|EEL68972.1| transcriptional regulator [Bacillus cereus AH603]
 gi|228747754|gb|EEL97623.1| transcriptional regulator [Bacillus mycoides DSM 2048]
          Length = 210

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQATLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|209528198|ref|ZP_03276667.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
 gi|209491364|gb|EDZ91750.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
          Length = 1778

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL- 301
           +  E R  CV VV EG++L GI+T+GDI R     + L  L V +VM  +     E  L 
Sbjct: 56  VYGEARSSCVLVV-EGEQLVGILTQGDIIRLCTEKRPLEQLLVGEVMTASVLSWRESELS 114

Query: 302 -LTVAMQLLRQHNISVLMVVDDCQKAIGIV---------HFLDLLRFGII 341
                + LLR++ I  L +VDD  + +G++         H +DLLR   +
Sbjct: 115 DFFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTV 164


>gi|91772812|ref|YP_565504.1| homoserine O-acetyltransferase [Methanococcoides burtonii DSM 6242]
 gi|91711827|gb|ABE51754.1| Homoserine O-acetyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 488

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 4/118 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           +DVM   + +  ++ G  +  A  ++ E+    + VV+E   L GI+T  DI +     L
Sbjct: 373 ADVMT--EKVATIREGASIDTAAKVMFEEALTHLPVVNENGCLVGIVTSWDISKAVA--L 428

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +E++M ++      D  +  A + + +H+IS L VVD+  + IGI+   D+ R 
Sbjct: 429 KCSKLENIMTRDVLTAFPDEPIVAAAKRMERHSISALPVVDEKNRLIGIIDSEDINRL 486


>gi|83716568|ref|YP_439711.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
 gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
 gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
          Length = 153

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I +V+    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 127


>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
 gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
          Length = 177

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 65/117 (55%), Gaps = 7/117 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTL 283
            S   I  V +  P+ DAIT+L+ KR G + V++EG ++ GI +E D I+R  H+    L
Sbjct: 44  RSSSDIISVTVDQPVSDAITLLASKRIGALPVMEEG-RVAGIFSERDVIYRLAHEGETCL 102

Query: 284 S--VEDVMIKNPKVILEDTLLT-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           S  + +VM  +P + +E ++L   A+ L+ +  I  L V+D  +   G +   DL++
Sbjct: 103 SRRIGEVM-TSPAITVERSMLVDQALALMTRRRIRHLPVIDG-EAMCGFISIGDLVK 157


>gi|322370216|ref|ZP_08044778.1| cbs domain containing protein [Haladaptatus paucihalophilus DX253]
 gi|320550552|gb|EFW92204.1| cbs domain containing protein [Haladaptatus paucihalophilus DX253]
          Length = 130

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVI 296
           L+D  +++SE+  GCV +VD G++  GI+T+  I  +     D +  +V DVM ++P  I
Sbjct: 12  LVDIASMMSEENVGCVPIVD-GRRPVGIVTDRKIALSLADEADASGRTVGDVMTRDPITI 70

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D  +  A++ +   +I  + VV+D ++ +GIV   D+L
Sbjct: 71  DADASVHDAIERMEDADIRRIPVVED-EELVGIVTLDDVL 109


>gi|24372818|ref|NP_716860.1| acetoin utilization protein AcuB, putative [Shewanella oneidensis
           MR-1]
 gi|24346917|gb|AAN54305.1|AE015568_3 acetoin utilization protein AcuB, putative [Shewanella oneidensis
           MR-1]
          Length = 143

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 14/108 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------KDLNTLS--VEDVM 289
           A  I  +  F  + V+DE  KL+G+++E D+ R             KDL TL   +  VM
Sbjct: 25  AKDIFEQANFHHLLVLDE-YKLEGVLSERDLLRAISPNLGNGAETSKDLETLQKRIHQVM 83

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +     L VA + L +HNI  L V+++    +GIV + DLLR
Sbjct: 84  TRNPVTVAPYVSLDVASRTLLEHNIGCLPVLEN-GDLVGIVTWKDLLR 130


>gi|311031030|ref|ZP_07709120.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus sp.
           m3-13]
          Length = 601

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 3/132 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G   A  +         VH A   + ++ +++   L I +S SG + 
Sbjct: 293 RIYIVAAGTSYHAGLVGAQMIEKLAKVPVEVHVASEFNYNMPILSEKPLFIFISQSGETA 352

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +    P + +T+   S ++  AD  L L   PE     +A T +   QL +
Sbjct: 353 DSRAVLVQVKELGYPALTVTNVQGSTLSREADFTLLLHAGPEIA---VASTKAYTAQLGV 409

Query: 186 GDALAIALLESR 197
               A  L ES+
Sbjct: 410 LSIFAAVLAESK 421


>gi|125624236|ref|YP_001032719.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124493044|emb|CAL98007.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300071015|gb|ADJ60415.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 283

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 59/136 (43%), Gaps = 2/136 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + GIG S  +   +    +  G   FF+  A      L +  R  + I +S  G + E
Sbjct: 133 IFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRKTIFIGISMKGETKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  +    R   IP+IAITS  +S +   +D +L      E      A T S + QL + 
Sbjct: 193 VIELARVVRGMEIPIIAITSREESTLGQMSDYILH-SVSGEDYQMRTAATMSLMAQLYVV 251

Query: 187 DALAIALLESRNFSEN 202
           D L   +  S +F+E+
Sbjct: 252 DIL-FYMFVSEHFTES 266


>gi|90410671|ref|ZP_01218686.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90410704|ref|ZP_01218719.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90328302|gb|EAS44600.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90328335|gb|EAS44633.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
          Length = 353

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+K    + DA+ I++ +    V VVD  + L+G++T+GDI R    +L  T  +  VM 
Sbjct: 9   LIKPTNTIRDALEIINNEALRVVLVVDHHEHLQGVVTDGDIRRGLLNNLALTAEITQVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            NP     +T     + +++ + I  L +VDD  + +G+
Sbjct: 69  SNPMTADVNTPRDELIAIMKSNGILSLPLVDDENRVVGL 107


>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
 gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
          Length = 144

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 3/69 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLS-- 284
           D +  +K G  + DA  IL+E+R G + V ++G++++GI++E DI R+   +    LS  
Sbjct: 13  DKVITIKPGTLVSDAARILAERRIGGLVVSEDGKQIQGILSERDIVRSLAVRGATCLSDR 72

Query: 285 VEDVMIKNP 293
           ++D+M +NP
Sbjct: 73  IDDMMTRNP 81


>gi|85373724|ref|YP_457786.1| CBS [Erythrobacter litoralis HTCC2594]
 gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
          Length = 147

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 2/99 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILE 298
           +A  ++ +   G + VVD+   L G+IT+ DI      D  +   SVEDVM  +P  +  
Sbjct: 22  EAANLMVKNDCGEIPVVDDSGTLVGVITDRDIACRCVADGKSSDTSVEDVMTSSPITVTP 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DT +      +  + +  L VVD+  K  GIV   D+ R
Sbjct: 82  DTSVDDCRSKMEDNKVRRLPVVDESGKCCGIVSQADIAR 120


>gi|304314337|ref|YP_003849484.1| transcriptional regulator [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587796|gb|ADL58171.1| predicted transcriptional regulator [Methanothermobacter
           marburgensis str. Marburg]
          Length = 293

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 47/82 (57%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           A + E  ++KGI+T  DI  +  +    L V ++M KN   +  + +++ A++++ +HNI
Sbjct: 205 APIVEDDEVKGIVTLSDITASIAEGTENLPVSEIMSKNIITVKPEMMISDAIEIMNKHNI 264

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
             L+V D   K +GI+   D+L
Sbjct: 265 GRLIVTDSEGKLLGIITRTDIL 286


>gi|225850809|ref|YP_002731043.1| chloride channel protein [Persephonella marina EX-H1]
 gi|225645136|gb|ACO03322.1| chloride channel protein [Persephonella marina EX-H1]
          Length = 586

 Score = 45.4 bits (106), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 10/120 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V  S V+      P+V++G        IL       + VV E   + G+I++ D+ +  +
Sbjct: 464 VMTSTVITVNKETPVVEVGL-------ILQNYGISLLPVV-ENDVVIGVISDSDLIKACN 515

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDL 335
           +D+  L V+D+M  NP  +  D  L   + +  ++NI +  VVD  + +K IGI+   D+
Sbjct: 516 QDMRQLKVKDIMNPNPICVTPDLSLFNTLSIFIENNIGIAPVVDSLENKKLIGIISDFDI 575


>gi|298369128|ref|ZP_06980446.1| transcriptional regulator, RpiR family [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298283131|gb|EFI24618.1| transcriptional regulator, RpiR family [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 285

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 30/172 (17%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA------ 83
           SI+ E+R L   ES L+  ++   H           RV   G+G SG +           
Sbjct: 104 SILGERRVLQ--ESELENAVAMLLHAR---------RVEFYGVGNSGIVAQDAQHKFFRF 152

Query: 84  --STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
             ST+A   T +  + AA        ++T  D+++ +S SGSS EL   +  A+     +
Sbjct: 153 GISTVAYVDTHTQLMAAA--------VLTDKDVLVAVSNSGSSIELLDAVSIAKENGTSV 204

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           IAIT  N S +A  AD VL++  +     +   P  S ++QLA+ D LAI L
Sbjct: 205 IAIT-RNDSPLAQLADCVLSIATQENIEVY--TPMVSRLLQLAVIDILAIGL 253


>gi|293376312|ref|ZP_06622550.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325845261|ref|ZP_08168565.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|292645060|gb|EFF63132.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325488702|gb|EGC91107.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 286

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ I GIG SG + +     L   G  SF +  +        ++ +DD+I+ +S SG++D
Sbjct: 132 KIYIIGIGYSGIVATDFNYKLMRIGANSFPIIDSHTMLMLASIMHQDDIILAISHSGNTD 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+   ++ A++    +IA+T    S +   AD+ LT      +   G    TS + Q+ +
Sbjct: 192 EVIETVHLAKQQGAKIIALTENYNSPLLQLADVFLTYQSNETTFETG--SVTSKLAQMFM 249

Query: 186 GDALAIALLESR 197
            D +   +++ +
Sbjct: 250 LDLIYTEMIKEQ 261


>gi|229031945|ref|ZP_04187932.1| transcriptional regulator [Bacillus cereus AH1271]
 gi|229098768|ref|ZP_04229706.1| transcriptional regulator [Bacillus cereus Rock3-29]
 gi|229104928|ref|ZP_04235585.1| transcriptional regulator [Bacillus cereus Rock3-28]
 gi|229117793|ref|ZP_04247158.1| transcriptional regulator [Bacillus cereus Rock1-3]
 gi|229163242|ref|ZP_04291197.1| transcriptional regulator [Bacillus cereus R309803]
 gi|228620305|gb|EEK77176.1| transcriptional regulator [Bacillus cereus R309803]
 gi|228665656|gb|EEL21133.1| transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228678502|gb|EEL32722.1| transcriptional regulator [Bacillus cereus Rock3-28]
 gi|228684612|gb|EEL38552.1| transcriptional regulator [Bacillus cereus Rock3-29]
 gi|228729409|gb|EEL80399.1| transcriptional regulator [Bacillus cereus AH1271]
          Length = 210

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|217076999|ref|YP_002334715.1| CBS domain containing membrane protein [Thermosipho africanus
           TCF52B]
 gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
           TCF52B]
          Length = 147

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 23/117 (19%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL------ 283
           + ILS ++   V V+DE  K+ G I+E DI R             +F  DLN        
Sbjct: 24  LKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPSYFSLLQTASFIPDLNQFVRNLKK 83

Query: 284 ----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +V ++M K    I E T L  A  L+ +H++ +L VVD+  K +G++  + +L
Sbjct: 84  ISNRAVSEIMTKPAITIKESTPLLHAADLMIRHSLKILPVVDEDDKLLGVITRMKIL 140


>gi|163942053|ref|YP_001646937.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
 gi|163864250|gb|ABY45309.1| putative signal-transduction protein with CBS domains [Bacillus
           weihenstephanensis KBAB4]
          Length = 211

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQATLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 180

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 181 VVKDTKQGLEVI 192


>gi|238796741|ref|ZP_04640247.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia mollaretii ATCC
           43969]
 gi|238719472|gb|EEQ11282.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia mollaretii ATCC
           43969]
          Length = 295

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 58/135 (42%), Gaps = 23/135 (17%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEAS 102
           A E +K   GR++  G G SG +G   AS    T             G PS  + A E +
Sbjct: 55  AAEALKQ-GGRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPSALLKAVEGA 113

Query: 103 HGDLGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             D+ +  RD         D+++ L+ SG +  +   L YAR+   P  AI+    S +A
Sbjct: 114 EDDMALGMRDLQDLNLTATDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIA 173

Query: 154 CHADIVLTLPKEPES 168
             A + ++    PE+
Sbjct: 174 QEALVAISPVVGPEA 188


>gi|57242158|ref|ZP_00370098.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           RM3195]
 gi|57017350|gb|EAL54131.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           RM3195]
          Length = 484

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + +A+ +++E R   V VVDE +KL GI+T  D+   F  + N   VE+VM K P +   
Sbjct: 105 IYEALELMAEYRISGVPVVDEERKLLGILTNRDL--RFESNFNN-RVENVMTKAPLITAP 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   L  A ++   + +  L +VD+    +G++   DL +
Sbjct: 162 KGCTLDDAEKIFSTNKVEKLPIVDESNHLVGLITIKDLKK 201


>gi|301166658|emb|CBW26234.1| hypothetical protein BMS_1368 [Bacteriovorax marinus SJ]
          Length = 310

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVI 296
           L DA+T++       + V++   +LKG+IT  D     + DL+  ++ V ++M   P  +
Sbjct: 203 LSDALTLMRNGATSTLVVMEYETELKGVITARDFLNKAYLDLDFQSVKVSEIMTPAPHKL 262

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LE  +L VA++ + + N   +++ +     I  V  L++LRF
Sbjct: 263 LEQDVLAVAIKNMAKFNYRNVIICNQVGYPISTVSILEILRF 304


>gi|110801643|ref|YP_699438.1| CBS domain-containing protein [Clostridium perfringens SM101]
 gi|110682144|gb|ABG85514.1| CBS domain protein [Clostridium perfringens SM101]
          Length = 206

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 60/115 (52%), Gaps = 8/115 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +M   +++ LV     L DA+ I+ + +F  + VVD G K +G + +  I++ + K+   
Sbjct: 6   IMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVD-GDKFRGAVAKSSIYKYYFKNNLS 64

Query: 280 ----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               LN ++V++++     +I +   +  A+ +L +  IS + VVD+     GI+
Sbjct: 65  KDEVLNNITVDEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFQGIL 119


>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
 gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
          Length = 205

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 68/146 (46%), Gaps = 22/146 (15%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N +  D  +     K G+   C     HS D++          DA+  ++E   G + V+
Sbjct: 54  NLTVADVLMTKGDEKTGSWLWC-----HSNDTV---------YDAVKNMAENNIGSLLVL 99

Query: 258 DEGQK-LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQ 311
             G+K L GIITE D  R      +  +   V ++M    +++    DT +  AMQL+  
Sbjct: 100 KPGEKHLAGIITERDYLRKVIAEGRSCHYTRVAEIMTDENRLVTVTSDTTILRAMQLMTD 159

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H+I  + V+D   + +G++  +D++R
Sbjct: 160 HHIRHVPVIDG--RIVGMISMVDVVR 183


>gi|323341979|ref|ZP_08082212.1| transcriptional regulator [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464404|gb|EFY09597.1| transcriptional regulator [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 280

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 54/128 (42%), Gaps = 2/128 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + GIG SG +   L            +          L  IT +D+ I LS+SG + 
Sbjct: 130 RIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITENDVTIALSYSGQTR 189

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A+      IAIT   ++ +A ++D V+ +PKE       L    S    LAI
Sbjct: 190 EIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVR--LGSIASRFSMLAI 247

Query: 186 GDALAIAL 193
            D L + +
Sbjct: 248 SDLLYLGV 255


>gi|229917121|ref|YP_002885767.1| RpiR family transcriptional regulator [Exiguobacterium sp. AT1b]
 gi|229468550|gb|ACQ70322.1| transcriptional regulator, RpiR family [Exiguobacterium sp. AT1b]
          Length = 301

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 12/138 (8%)

Query: 65  GRVVITGIGKS--GHIGSKLAST---LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
            RV+  G+G S    I ++   T    A+T +P F    +   H  LG   + D+ + +S
Sbjct: 151 SRVIFYGVGGSSTAAIDAQYKFTKLGYAATTSPDFHYMLSLIPH--LG---KSDVFVAIS 205

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG + ++  ++ +A++  +P+IAIT+ +KS +   AD+ L  P         +A   S 
Sbjct: 206 TSGRTKDVLELVRFAKKKRVPVIAITNLDKSPLYREADVRLCTPN--VESDFRIASIASR 263

Query: 180 IMQLAIGDALAIALLESR 197
           + QL I D L + LL  +
Sbjct: 264 MTQLTIIDTLYMGLLHRK 281


>gi|239637743|ref|ZP_04678711.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus warneri L37603]
 gi|239596702|gb|EEQ79231.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus warneri L37603]
          Length = 290

 Score = 45.4 bits (106), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R+ I G G S  + + L   L+  G     V         L      D ++ ++ +G  
Sbjct: 130 NRIFIYGYGASFVVATDLYQKLSRIGMNVQLVQETHIFTTMLASCNSRDCVVFITNNGMQ 189

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E++AI      + IP+I ITS +K++++  +DIVL   +  E+    +  TTS   Q+ 
Sbjct: 190 SEMQAIAKVVVDYHIPIITITSSSKNIISQMSDIVLDYGQSDEN-EMRMGATTSLFAQMF 248

Query: 185 IGDAL 189
             D L
Sbjct: 249 TIDIL 253


>gi|298717570|ref|YP_003730212.1| RpiR family transcriptional regulator [Pantoea vagans C9-1]
 gi|298361759|gb|ADI78540.1| RpiR family transcriptional regulator [Pantoea vagans C9-1]
          Length = 296

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM-ITRDDLIIVLSWSGSSD 125
           V I GI  SG +       L   G P+F ++ A  +  +  + + R D++I+++   +  
Sbjct: 146 VAIFGINASGILADYSVRLLNRIGLPAFSLNRAGIALAEQMLALQRGDVLIMMAQQSAHR 205

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           E   ++  A+R  IP+I +T+   S  A  AD+V+ +P+  E    G  P    IM
Sbjct: 206 EGTTVVREAKRLDIPIILLTNATDSFFAREADVVINVPRGGE---KGRIPLHGTIM 258


>gi|302340356|ref|YP_003805562.1| RpiR family transcriptional regulator [Spirochaeta smaragdinae DSM
           11293]
 gi|301637541|gb|ADK82968.1| transcriptional regulator, RpiR family [Spirochaeta smaragdinae DSM
           11293]
          Length = 276

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 8/131 (6%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V+ITG G SG I  +L + L   G                 +++  DL+ V+S SG+S
Sbjct: 129 GKVLITGSGTSGPIAHELYNRLFRLGINCTVASDVMLQIMHAALLSEKDLLFVISQSGAS 188

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT--SAIMQ 182
           D +   +  A+R S+P++ IT    + +A  +D++L       S  H   P T  S I Q
Sbjct: 189 DMVMRAVEVAKRSSVPVMTITGNALTELAKASDVLLL------SVCHEQNPETVASRIAQ 242

Query: 183 LAIGDALAIAL 193
            AI  A+ ++L
Sbjct: 243 HAIVQAIYLSL 253


>gi|172040076|ref|YP_001799790.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium urealyticum
           DSM 7109]
 gi|171851380|emb|CAQ04356.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium urealyticum
           DSM 7109]
          Length = 519

 Score = 45.4 bits (106), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVDE Q L GIIT  D+   F +D+N   V +VM   P V+ E  +    A++L
Sbjct: 139 RISGLPVVDEDQTLLGIITNRDM--RFERDINR-PVREVMTPMPLVVAEQGVSADAALRL 195

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++ +  L +VD   K  G++   D  +
Sbjct: 196 LSENKVEKLPIVDGAGKLTGLITVKDFAK 224


>gi|307565742|ref|ZP_07628211.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
           21A-A]
 gi|307345568|gb|EFN90936.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
           21A-A]
          Length = 494

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 60/106 (56%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++ G  + +A++I++E   G + VVD+   L GI+T  D+   F + L+  S++ VM  +
Sbjct: 105 IRRGSTVQEALSIMAEYHIGGIPVVDDDNHLVGIVTNRDL--RFERCLDK-SIDQVMTSE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N     + T L+ A ++L+++ I  L VVD     IG++ + D+ +
Sbjct: 162 NLVTTHQKTNLSEAAEILQENKIEKLPVVDKDNHLIGLITYKDITK 207


>gi|261418237|ref|YP_003251919.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. Y412MC61]
 gi|297529091|ref|YP_003670366.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. C56-T3]
 gi|319767803|ref|YP_004133304.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. Y412MC52]
 gi|261374694|gb|ACX77437.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y412MC61]
 gi|297252343|gb|ADI25789.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. C56-T3]
 gi|317112669|gb|ADU95161.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y412MC52]
          Length = 435

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V   D++   D    +++  P+     +  E R     VVD+  K++G++T  D+    
Sbjct: 188 IVLVEDILIPLDKTAYLRVNDPIERWYALNKETRHSRFPVVDDELKVQGVVTAKDVL--- 244

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D++  L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+   D+
Sbjct: 245 --DVDRQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDYNRLQGIISRQDV 302

Query: 336 LR 337
           L+
Sbjct: 303 LK 304


>gi|124028008|ref|YP_001013328.1| hypothetical protein Hbut_1146 [Hyperthermus butylicus DSM 5456]
 gi|123978702|gb|ABM80983.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 240

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 10/114 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHK-DLNTLS------ 284
           V+   P+     ++  KRF  + VV EG KL G+I E D I R F + D  + S      
Sbjct: 122 VEPTTPVYKVWQVMMSKRFAALPVVSEG-KLIGVIAEHDLIVRGFARPDFESPSGIRRGP 180

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V ++M   P  +L    L  A +L+ +  I  + VVDD +  +G+V   D++R
Sbjct: 181 LVRELMSTPPVTVLPTVPLLSAARLIVERYIGRVYVVDDDESLLGVVDRSDIVR 234


>gi|156937882|ref|YP_001435678.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566866|gb|ABU82271.1| putative signal-transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 143

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 10/122 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +  +DVM    S P+V IG    L +A   + +K  G + VVDE   + GIITE D+ R 
Sbjct: 4   ITVADVM----SKPVVVIGVNNTLREAAKEMMDKGVGSLVVVDEKGDVVGIITERDVVRA 59

Query: 276 FH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               KDLN   V +VM  +   +  +T +  A++ ++ HN+  L V  D  + +G+V   
Sbjct: 60  VAEGKDLNA-PVSEVMTPDVLTVSPETSVLKAIETMKMHNVRHLPVASD-DEIVGMVSLK 117

Query: 334 DL 335
           DL
Sbjct: 118 DL 119


>gi|42783423|ref|NP_980670.1| CBS domain-containing protein [Bacillus cereus ATCC 10987]
 gi|52141204|ref|YP_085624.1| CBS domain-containing protein [Bacillus cereus E33L]
 gi|196039238|ref|ZP_03106544.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|196046413|ref|ZP_03113639.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|217961787|ref|YP_002340357.1| CBS domain protein [Bacillus cereus AH187]
 gi|222097742|ref|YP_002531799.1| cbs domain protein [Bacillus cereus Q1]
 gi|225866278|ref|YP_002751656.1| CBS domain protein [Bacillus cereus 03BB102]
 gi|228916929|ref|ZP_04080491.1| transcriptional regulator [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929340|ref|ZP_04092365.1| transcriptional regulator [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935617|ref|ZP_04098432.1| transcriptional regulator [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948010|ref|ZP_04110296.1| transcriptional regulator [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987547|ref|ZP_04147666.1| transcriptional regulator [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093366|ref|ZP_04224473.1| transcriptional regulator [Bacillus cereus Rock3-42]
 gi|229123835|ref|ZP_04253029.1| transcriptional regulator [Bacillus cereus 95/8201]
 gi|229141034|ref|ZP_04269577.1| transcriptional regulator [Bacillus cereus BDRD-ST26]
 gi|229157911|ref|ZP_04285985.1| transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|229186536|ref|ZP_04313698.1| transcriptional regulator [Bacillus cereus BGSC 6E1]
 gi|229198423|ref|ZP_04325129.1| transcriptional regulator [Bacillus cereus m1293]
 gi|42739352|gb|AAS43278.1| CBS domain protein [Bacillus cereus ATCC 10987]
 gi|51974673|gb|AAU16223.1| CBS domain protein [Bacillus cereus E33L]
 gi|196022883|gb|EDX61564.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|196029865|gb|EDX68466.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|217063647|gb|ACJ77897.1| CBS domain protein [Bacillus cereus AH187]
 gi|221241800|gb|ACM14510.1| CBS domain protein [Bacillus cereus Q1]
 gi|225785682|gb|ACO25899.1| CBS domain protein [Bacillus cereus 03BB102]
 gi|228585123|gb|EEK43235.1| transcriptional regulator [Bacillus cereus m1293]
 gi|228596967|gb|EEK54625.1| transcriptional regulator [Bacillus cereus BGSC 6E1]
 gi|228625570|gb|EEK82323.1| transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|228642467|gb|EEK98755.1| transcriptional regulator [Bacillus cereus BDRD-ST26]
 gi|228659656|gb|EEL15302.1| transcriptional regulator [Bacillus cereus 95/8201]
 gi|228690022|gb|EEL43823.1| transcriptional regulator [Bacillus cereus Rock3-42]
 gi|228772279|gb|EEM20726.1| transcriptional regulator [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811700|gb|EEM58035.1| transcriptional regulator [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824057|gb|EEM69874.1| transcriptional regulator [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830354|gb|EEM75966.1| transcriptional regulator [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842753|gb|EEM87839.1| transcriptional regulator [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|324328201|gb|ADY23461.1| putative signal-transduction protein with CBS domains [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 210

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 180 VVKDTKQGLEVV 191


>gi|91215283|ref|ZP_01252255.1| putative inosine-5'-monophosphate dehydrogenase [Psychroflexus
           torquis ATCC 700755]
 gi|91186888|gb|EAS73259.1| putative inosine-5'-monophosphate dehydrogenase [Psychroflexus
           torquis ATCC 700755]
          Length = 488

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+       E    VLH    +    +    V  +   + +  
Sbjct: 45  PIVSAAMDTVTESRMAIAIAR-----EGGIGVLHKNMTIEQQALKVRRVKRAESGMIIDP 99

Query: 235 IGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P+     DA   + E   G + +VD+ +KL GI+T  D+   F +  N   +++VM 
Sbjct: 100 VTLPITATVKDANDSMREHSIGGIPIVDDSKKLIGIVTNRDL--RFEQK-NDRPIKEVMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            KN   + E T L  A  +L++H I  L V++   + +G++ F D+ + 
Sbjct: 157 TKNLVTVSEGTSLKEAEVILQKHKIEKLPVINKNNELVGLITFRDITKL 205


>gi|11499385|ref|NP_070624.1| hypothetical protein AF1796 [Archaeoglobus fulgidus DSM 4304]
 gi|7388512|sp|O28478|Y1796_ARCFU RecName: Full=Uncharacterized protein AF_1796
 gi|2648766|gb|AAB89472.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 183

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 11/149 (7%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG+I    A  L   G   + V            IT  D+++ +S SG +  
Sbjct: 37  IFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPR-----ITDQDVLVAISGSGETTS 91

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLT----LPKEPESCPHGLAP--TTSAI 180
           +  I   A+     L+A+T +  S +A  AD+V+     + +E +     LAP  T   +
Sbjct: 92  VVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFEL 151

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHP 209
             +   DAL   ++  ++ +E D    H 
Sbjct: 152 TAMIFLDALVAEIMMQKHLTEKDLEARHA 180


>gi|317154893|ref|YP_004122941.1| CBS domain-containing protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316945144|gb|ADU64195.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 225

 Score = 45.1 bits (105), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITE-------------GDIFRNFHKDLNTLSV 285
           ++DA  IL +K      VVD    L GI+++             GD        LNTL+ 
Sbjct: 20  VMDAADILRQKDIRQFPVVDGQGVLVGIVSDRDIRDAMPSKFIPGDCTDGREGGLNTLTA 79

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M   P  +  DT +    ++L +H I  L VV+   K +GI+   D++RF
Sbjct: 80  GDIMTPGPLTVAPDTAINAVAEILVRHKIGGLPVVEGG-KLVGIITQADVMRF 131


>gi|302550675|ref|ZP_07303017.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468293|gb|EFL31386.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 154

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 62/134 (46%), Gaps = 8/134 (5%)

Query: 208 HPGGKLGTLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            P G    L   A D+MH G   IP  +    L  A  ++ E   G + + DE ++L GI
Sbjct: 4   RPSGTGRYLMTTAGDIMHRGAQWIPAHET---LDRAAQLMRELNVGALPISDENERLCGI 60

Query: 267 ITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+ DI         D   ++  ++    P+ I  +  +   ++ +R+H I  L V+ D 
Sbjct: 61  LTDRDIVVGCVAMGHDPARVTAGEMAKGTPRWIDANAEVGEVLREMREHQIRRLPVIQD- 119

Query: 324 QKAIGIVHFLDLLR 337
           ++ +G++   DL R
Sbjct: 120 KRLVGMISEADLAR 133


>gi|116750105|ref|YP_846792.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116699169|gb|ABK18357.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 146

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 11/130 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT  VC  D+MH G  +   +    L +   I+ E     V V+ E  ++ G+I+  +I 
Sbjct: 3   GTTRVC--DLMHKG--VVFCRPEDNLKEVAGIMKENGLRSVVVMHESGEVWGLISLLEII 58

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDD---CQKAIG 328
           R+F +DL  +S E VM   P  I  D    +  +++L+++  I  L++VD     ++ IG
Sbjct: 59  RSFGEDLEGISAESVM--QPYKIHVDPQWPIERSIELMKKRRIEHLIIVDPHAGPKRPIG 116

Query: 329 IVHFLDLLRF 338
           ++   D++R+
Sbjct: 117 LLSSYDIVRY 126


>gi|116747621|ref|YP_844308.1| signal transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696685|gb|ABK15873.1| putative signal transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 132

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 5/90 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           +  + + DE  ++ GI+TE D+    +  +DL  L+ E+VM K+P     DT ++  + L
Sbjct: 35  YSGMPITDEEDQVIGIVTELDLLEAASEGRDLGELTAEEVMTKDPFTTDIDTPISEVINL 94

Query: 309 LRQHNISVLMVVDDCQKA-IGIVHFLDLLR 337
           +R++NI  L V +  Q A +GIV   D+LR
Sbjct: 95  MREYNIIRLPVTE--QGALVGIVSRCDILR 122


>gi|317497980|ref|ZP_07956285.1| rpiR family Helix-turn-helix domain-containing protein
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316894733|gb|EFV16910.1| rpiR family Helix-turn-helix domain-containing protein
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 283

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           +G IT +DL+I  ++S    +  + L   +  ++P+I ITS   S +A ++DIVL LP +
Sbjct: 170 VGNITSNDLVIFCTYSAMHHDYNSYLPVLKDHNVPIITITSNIHSKLAVNSDIVLQLPDD 229

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            ES    +A   S      I D +  +++  +N+ EN
Sbjct: 230 -ESFDEKVASFASQTNMDFIFDYI-YSIIFQKNYMEN 264


>gi|218297198|ref|ZP_03497860.1| inosine-5'-monophosphate dehydrogenase [Thermus aquaticus Y51MC23]
 gi|218242475|gb|EED09014.1| inosine-5'-monophosphate dehydrogenase [Thermus aquaticus Y51MC23]
          Length = 494

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  ++ E R G + VVD   KL G++T  D+   F +DL    V +VM    +++  
Sbjct: 108 LEDAERLMREYRIGGLPVVDLYGKLLGLVTNRDL--RFERDLKR-PVSEVMTPLERLVTA 164

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++LR+H +  L +VD+  +  G++   D+++
Sbjct: 165 PPGTTLEEAEEILRRHKVEKLPLVDEAGRLRGLLTLKDIVK 205


>gi|148655860|ref|YP_001276065.1| signal-transduction protein [Roseiflexus sp. RS-1]
 gi|148567970|gb|ABQ90115.1| putative signal-transduction protein with CBS domains [Roseiflexus
           sp. RS-1]
          Length = 155

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 67/126 (53%), Gaps = 11/126 (8%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
           SDVMH G  +   ++  P+ +AI ++ + R   + VVD    L GI+++ D+ R +    
Sbjct: 24  SDVMHYG--VISCRVETPVEEAIELMQKHRIHALVVVDGPGYLAGIVSQTDLLRAWKEGS 81

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA----IGIVH 331
             +++    V ++M ++    + +  L  A+QLL +++I  L+VV++        +GI+ 
Sbjct: 82  SFENVMRGPVGEIMTRSVITCMPEMELERAIQLLNRNHIHRLVVVEERNDGRFWPVGILS 141

Query: 332 FLDLLR 337
             D++R
Sbjct: 142 MTDIVR 147


>gi|311897879|dbj|BAJ30287.1| putative RpiR family transcriptional regulator [Kitasatospora setae
           KM-6054]
          Length = 291

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDDLIIVLSWSG 122
           R++  G+G S          L   G P+ F   VHAA  +   LG    DDL + +S SG
Sbjct: 138 RILAVGVGSSALAALDATQKLQRLGYPAVFASDVHAALMTAALLGP---DDLALGISHSG 194

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIM 181
            + E+  +L  AR        +TS  +S  A  AD+VL T  +E E    G   T S   
Sbjct: 195 RAREVVEVLEEARLAGAATAVVTSNPRSPAAAPADLVLRTAARETEFRSGG---TASRTA 251

Query: 182 QLAIGDALAIALLE 195
           QL + DAL + L +
Sbjct: 252 QLTVVDALYVTLAQ 265


>gi|49481309|ref|YP_038353.1| CBS domain-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332865|gb|AAT63511.1| CBS domain protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 210

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRKEDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 180 VVKDTKQGLEVV 191


>gi|55379702|ref|YP_137552.1| MaoC family protein [Haloarcula marismortui ATCC 43049]
 gi|55232427|gb|AAV47846.1| MaoC family protein [Haloarcula marismortui ATCC 43049]
          Length = 297

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPK 294
            P+I+A   L ++  G + V D+G  + GIITE DI        D   LSV DVM +   
Sbjct: 22  APVIEAAQRLRDEDIGSLVVEDDGSCV-GIITESDIVAVTAAEGDTRALSVGDVMAETLV 80

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  D  +  A+  L+ +NI  L VV+D    +GIV   DL  +
Sbjct: 81  TVAPDADMQAAVDRLQTNNIKKLPVVEDG-SLVGIVTTTDLSDY 123


>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
 gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
          Length = 241

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 59/106 (55%), Gaps = 14/106 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI +++EKR G   VVD+  ++ GI +E D       DL  L+  + ++K+   I+   
Sbjct: 123 DAIKVMNEKRVGATIVVDKNNRMTGIFSERDYLSKV--DLRGLTPRETLVKD---IMSSK 177

Query: 301 LLTVA--------MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++TV+        + ++ + NI  L V+D+ ++ IG++   D++++
Sbjct: 178 VITVSGDSGASKCLSIMTKRNIRHLPVLDN-KRLIGMLSIGDIVKY 222


>gi|258649204|ref|ZP_05736673.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
           51259]
 gi|260850469|gb|EEX70338.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
           51259]
          Length = 493

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  +  A+ ++ E   G + VVD+   L GI+T  D+   F  +L+   VEDVM K   V
Sbjct: 109 GSTVRGALQLMHEYHIGGIPVVDDDMHLVGIVTNRDL--RFEHNLDQ-KVEDVMTKEHLV 165

Query: 296 -ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + T L  A ++L+++ I  L V+D   K +G++ + D+ +
Sbjct: 166 TTTQQTDLQGAARILKENKIEKLPVIDKDGKLVGLITYKDITK 208


>gi|225620669|ref|YP_002721927.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
 gi|225215489|gb|ACN84223.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
          Length = 285

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 60/138 (43%), Gaps = 4/138 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + GIG S      L   L      +FF   A  +      +T +D++I  S+SG ++E
Sbjct: 133 IYMLGIGASSLSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEEDVVIAFSYSGRTNE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A      +IA+T +  + ++  AD+++T+P   E    G    TS    L + 
Sbjct: 193 VIYPVKIASSKKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMG--AITSKYSSLIVS 250

Query: 187 DALAIALLES--RNFSEN 202
           D L    ++    N  EN
Sbjct: 251 DLLYFGAIQKDFENIKEN 268


>gi|124515918|gb|EAY57427.1| Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
           [Leptospirillum rubarum]
          Length = 615

 Score = 45.1 bits (105), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 46/171 (26%), Positives = 78/171 (45%), Gaps = 8/171 (4%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTP 92
           R LSS   + +G LS +F  A E+      R+ I G G S H   +G     +LA  G P
Sbjct: 266 RLLSSRIRTERGRLSVRFSPAAERALLGAKRIRIVGCGTSFHAGLLGKYRIESLA--GIP 323

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                A+E  + +  +    DL+++L+ SG + +  A L  AR   +P +++ +   S  
Sbjct: 324 VEVDVASEFRYREPILDPATDLLVLLTQSGETADTLAALRMAREAGVPTLSLVNVEGSTA 383

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
              AD  + L   PE    G+A T + + Q+ +   +A+ L      +E +
Sbjct: 384 DREADAAIFLEAGPE---FGVAATKTFLSQITLLTLIALFLAPEVRLAEKE 431


>gi|7007417|dbj|BAA90835.1| GuaB [Bacillus halodurans]
          Length = 281

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  ++ + R   V +VDE QKL GI+T  D+   F +D +TL ++DVM K   V   
Sbjct: 108 VFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDL--RFIEDYSTL-IDDVMTKENLVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 165 VGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202


>gi|289805435|ref|ZP_06536064.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 110

 Score = 45.1 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 33/104 (31%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVIL 297
           ++DA+  LS    G VAV DE   +KG+ T+GD+ R        T  V + M  N   + 
Sbjct: 7   VMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQ 66

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 67  AQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 110


>gi|84496283|ref|ZP_00995137.1| CBS:HPP [Janibacter sp. HTCC2649]
 gi|84383051|gb|EAP98932.1| CBS:HPP [Janibacter sp. HTCC2649]
          Length = 197

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 53/115 (46%), Gaps = 15/115 (13%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----------NFHKDLNTLS- 284
            PL  AI +L+ +R   + VVDE  ++ GIITEGDI R              + + T+  
Sbjct: 18  APLEAAIDVLARERVSALPVVDEDHQVVGIITEGDILRLRLPEDPRAHLRPTRPMPTVDQ 77

Query: 285 -VEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V DVM   P+          VA+ L R+     + VVDD    +G+V   D +R
Sbjct: 78  RVRDVMSAEPECATAHQDSSHVALTLSRR-GWKSMPVVDDHGALVGMVSRSDFVR 131


>gi|242766797|ref|XP_002341242.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218724438|gb|EED23855.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 674

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     L    +++ ++M
Sbjct: 108 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKAREVTIAEIM 167

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 168 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 208


>gi|47567861|ref|ZP_00238569.1| CBS domain protein [Bacillus cereus G9241]
 gi|118479467|ref|YP_896618.1| CBS domain-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|301055790|ref|YP_003794001.1| putative signal-transduction protein with CBS domains [Bacillus
           anthracis CI]
 gi|47555538|gb|EAL13881.1| CBS domain protein [Bacillus cereus G9241]
 gi|118418692|gb|ABK87111.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
 gi|300377959|gb|ADK06863.1| putative signal-transduction protein with CBS domains [Bacillus
           cereus biovar anthracis str. CI]
          Length = 211

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 180

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 181 VVKDTKQGLEVV 192


>gi|227487030|ref|ZP_03917346.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227093104|gb|EEI28416.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 533

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNI 314
           VVDE  KL GI T  D+   F  D+N L V+DVM   P ++ ++++    A++LL +H +
Sbjct: 160 VVDEKDKLLGICTNRDM--RFEPDMNRL-VKDVMTPMPLIVAKESVTKPEALKLLSEHRV 216

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +V D    +G++   D ++
Sbjct: 217 EKLPIVKDDNTLVGLITVKDFVK 239


>gi|134045264|ref|YP_001096750.1| hypothetical protein MmarC5_0219 [Methanococcus maripaludis C5]
 gi|132662889|gb|ABO34535.1| protein of unknown function DUF39 [Methanococcus maripaludis C5]
          Length = 513

 Score = 45.1 bits (105), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +A  +L E     + ++DE  KL GIIT  DI +   +D +++S  ++M         
Sbjct: 407 ITEASRVLIENNINHLPIIDENGKLSGIITSWDIAKAMAQDKHSIS--EIMTTYIVSATP 464

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  + +A + + ++NIS L VVD   + +G+V   D+ + 
Sbjct: 465 DETIDMAARKMSRNNISGLPVVDSNNRVLGVVSAEDISKL 504


>gi|157371897|ref|YP_001479886.1| putative DNA-binding transcriptional regulator [Serratia
           proteamaculans 568]
 gi|157323661|gb|ABV42758.1| transcriptional regulator, RpiR family [Serratia proteamaculans
           568]
          Length = 282

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 7/166 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ EK+  ++L ++L      + H A+E ++  + RV++ GIG SG +    +  L   G
Sbjct: 102 LLVEKQ--AALRATLDINSEERLHQALEMLRQAR-RVILLGIGASGLVAKDFSYKLLKIG 158

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +            +  + + DL++ +S+SG   E+      AR     ++A+TS + +
Sbjct: 159 VMAVAEQDMHVQLATVQALDKRDLLLAISFSGERREINLAAEEARLAGAKVLALTSFSPN 218

Query: 151 VVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            +   AD  L T+ +EP +    ++ +T+   Q A+ D L +AL++
Sbjct: 219 GLQQRADHCLYTIAEEPNTRSAAISSSTA---QYALTDLLFMALIQ 261


>gi|289548504|ref|YP_003473492.1| diguanylate cyclase with PAS/PAC, CBS and GAF sensors [Thermocrinis
           albus DSM 14484]
 gi|289182121|gb|ADC89365.1| diguanylate cyclase with PAS/PAC, CBS and GAF sensors [Thermocrinis
           albus DSM 14484]
          Length = 822

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 8/116 (6%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNT 282
           G   P++   C L +A  ++ EK  G V V++E  ++ G++TE DI R    N   +   
Sbjct: 11  GGEDPVISADCTLREATEVMREKGRGFV-VLEENGRVVGLLTERDIVRLVAENVSLEEKA 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+     I     + ED  +  A+ L+ ++NI  L+VVD   +  G V   +LLR+
Sbjct: 70  LTYATTHIMQ---VREDRDVLYALSLMLENNIRRLVVVDGSGRRRGCVTMQELLRY 122


>gi|256380521|ref|YP_003104181.1| inosine-5'-monophosphate dehydrogenase [Actinosynnema mirum DSM
           43827]
 gi|255924824|gb|ACU40335.1| inosine-5'-monophosphate dehydrogenase [Actinosynnema mirum DSM
           43827]
          Length = 503

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 55/196 (28%), Positives = 80/196 (40%), Gaps = 20/196 (10%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP + E  P G+  +T     + +   LA A +++         +   GG +G L
Sbjct: 22  DDVLLLPAQSEIVPSGVDTSTRLSRNIVLRVPLASAAMDTVTEGRMAIAMARQGG-IGVL 80

Query: 217 FVCASDVMHSGDSIPLVK----------IGCPLIDAIT----ILSEKRFGCVAVVDEGQK 262
               S V      +  VK          + C   D I     + +  R   V V DE  K
Sbjct: 81  HRNLS-VEEQARQVETVKRSEAGMVSDPVTCSPGDTIKHVDDLCARYRISGVPVTDEAGK 139

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVD 321
           L GIIT  DI   F  D +   V +VM K P +  +       A+ LLR+H I  L +VD
Sbjct: 140 LVGIITNRDI--RFEVDYSR-KVAEVMTKGPLITAQVGVSAEAALGLLRRHKIEKLPIVD 196

Query: 322 DCQKAIGIVHFLDLLR 337
              K  G++   D ++
Sbjct: 197 GDNKLRGLITVKDFVK 212


>gi|53717172|ref|YP_105966.1| CBS domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
 gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|76818563|ref|YP_337630.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|121597823|ref|YP_989945.1| CBS domain-containing protein [Burkholderia mallei SAVP1]
 gi|124381836|ref|YP_001024428.1| CBS domain-containing protein [Burkholderia mallei NCTC 10229]
 gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
 gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
 gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
 gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
 gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
 gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
 gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
 gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
 gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
 gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
 gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
 gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
 gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
 gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
 gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
 gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
 gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
 gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
 gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
 gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
 gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
 gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
 gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
 gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
          Length = 154

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I +V+    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K +G+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDDG-KLVGLVSIGDLVK 127


>gi|209520969|ref|ZP_03269706.1| CBS domain containing membrane protein [Burkholderia sp. H160]
 gi|209498606|gb|EDZ98724.1| CBS domain containing membrane protein [Burkholderia sp. H160]
          Length = 369

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 3/72 (4%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + F +  N L  EDVM ++   +  DT    A +L ++H++  L VVD  QK +GIV  
Sbjct: 211 LQAFSRSFNELRCEDVMSRHVVSVSPDTRAAAAWELFKRHHVKALPVVDAGQKLLGIVTR 270

Query: 333 LDLLR---FGII 341
            D +    FG++
Sbjct: 271 ADFVERKGFGVL 282


>gi|14590193|ref|NP_142258.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           horikoshii OT3]
 gi|3256656|dbj|BAA29339.1| 178aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 178

 Score = 45.1 bits (105), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           +LS+ + G   V+D+G+ L G++TE DI        KD   + VE++M KNP  I  D  
Sbjct: 30  VLSKNKVGSAVVMDKGEVL-GVVTERDILDKVVAKGKDPKEVKVEEIMTKNPVKIEYDYD 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A++L+ +  +  ++V     K IG V   DLL
Sbjct: 89  VQDAIELMTEKGVRRILVT-KFGKPIGFVTATDLL 122


>gi|238788217|ref|ZP_04632012.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia frederiksenii
           ATCC 33641]
 gi|238723804|gb|EEQ15449.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia frederiksenii
           ATCC 33641]
          Length = 295

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D+ +  R
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGAEDDMSLGER 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D+++ L+ SG +  +   L YAR+   P  AI+    S +A  A + ++ 
Sbjct: 123 DLQDLKLTPTDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIAQEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|218887932|ref|YP_002437253.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 223

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 14/112 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           ++ A  IL E R   + VVD   +L GI+++ DI                +  L+ + V+
Sbjct: 20  MMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEASPSKATTLDMHELYYLLSEIKVK 79

Query: 287 DVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D+M ++P  V  +DT+ TVA+ ++ +  I  L V+DD  K +GI+   D+ +
Sbjct: 80  DIMTRDPFTVRADDTVETVALNMI-EKRIGGLPVIDDAGKLVGIISDSDVFK 130


>gi|148926035|ref|ZP_01809721.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845514|gb|EDK22606.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 445

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D +  SVE+VM K P +   + 
Sbjct: 67  EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSN-SVENVMTKMPLITAPKG 123

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 124 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 161


>gi|238784192|ref|ZP_04628205.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           bercovieri ATCC 43970]
 gi|238714901|gb|EEQ06900.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           bercovieri ATCC 43970]
          Length = 280

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 5/149 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E ++A + R+++TGIG SG +   LA  L   G  +       A    +  +   DL+
Sbjct: 123 ALEMLRAAR-RIILTGIGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLL 181

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLA 174
           + +S+SG   E+      A+R    ++A+TS + + +   AD  L T+ +EP      ++
Sbjct: 182 LAISFSGERREINLAAEEAQRCGAKVLALTSFSPNSLQQRADHCLYTISEEPVIRSAAIS 241

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSEND 203
            +T+   Q A+ D L +A+++    S  D
Sbjct: 242 SSTA---QYALTDLLFMAMIQQDLESAQD 267


>gi|313683571|ref|YP_004061309.1| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)
           [Sulfuricurvum kujiense DSM 16994]
 gi|313156431|gb|ADR35109.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Sulfuricurvum kujiense DSM 16994]
          Length = 974

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 72/140 (51%), Gaps = 8/140 (5%)

Query: 200 SENDFYVLHPG-GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           SE DF + H G  +LG   V A  +  SG S+ +V    PL +A  ++ E++    AVV 
Sbjct: 116 SEGDF-LRHIGFEQLGKFKVVAEAM--SG-SLLIVSPDTPLFEAAALMHERK-SEYAVVL 170

Query: 259 EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            G    G+ITE DI R     K    ++VE ++ +N  +I +   L  A  L+ +H +  
Sbjct: 171 NGSHPSGLITERDIARVHAQKKGDKDVTVEALLHRNFHLIEKSIPLQEAASLMEEHGVHQ 230

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L+VVD+    +G++   D+L
Sbjct: 231 LIVVDETGNLVGLLSRHDVL 250



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA+  +++     V VVD   +  GI TE D        +N   S+ +VM   P  + E 
Sbjct: 25  DALETMTKAGISSVIVVDSDNRPIGIFTEHDALGVVADFINIEQSLREVMTPEPFCVEET 84

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A  ++ +     L+VVD+ ++ +G+V   D LR
Sbjct: 85  FYLHDAYAMMEEKGYRHLVVVDEEERFVGVVSEGDFLR 122


>gi|229174971|ref|ZP_04302491.1| transcriptional regulator [Bacillus cereus MM3]
 gi|228608639|gb|EEK65941.1| transcriptional regulator [Bacillus cereus MM3]
          Length = 210

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQAILL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNITMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|332308384|ref|YP_004436235.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175713|gb|AEE24967.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 282

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 3/144 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           FH AV+ +K+ K R++I G+G S  +G   +  L   G  +       A       ++ +
Sbjct: 120 FHQAVDLLKSAK-RILICGLGGSALVGKDFSYKLQKLGMLAIEEPDMHAQLAFAATLSEN 178

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++  +S SGS+ E+  ++  A++ +  +I +T    + V+  ADI L    E ES    
Sbjct: 179 DVVFAISESGSTREIVNVVKQAKQNNCKVITVTRYGATPVSDLADIKLYSVAEEESAR-- 236

Query: 173 LAPTTSAIMQLAIGDALAIALLES 196
           L+   +   Q  I D L IA+ +S
Sbjct: 237 LSSIMARTAQEFIIDILFIAITQS 260


>gi|157376234|ref|YP_001474834.1| mannose-1-phosphate guanyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|157318608|gb|ABV37706.1| mannose-1-phosphate guanyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 352

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 7/88 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----VEDVMIKNPK 294
           L DA+ +++ +      V D  + L G+IT+GDI R     LN LS    V +VM +NP+
Sbjct: 16  LRDALELINSQALQVALVTDHDKHLLGVITDGDIRRGL---LNNLSLDALVTEVMNRNPR 72

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                T     +QL++QH+I  + +V D
Sbjct: 73  TASPSTSKKKLLQLMQQHSILSIPLVKD 100


>gi|156937441|ref|YP_001435237.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566425|gb|ABU81830.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 275

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVI 296
           PL + +  ++E   G V ++D   K+ GI TE D+  N   +L           KNPKV+
Sbjct: 91  PLWEVLKAMAEADVGAVPLLDNEGKVIGIFTERDVVLNVAPELEWEGEAMKYATKNPKVV 150

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLRFGI 340
              T L  A+ ++ +  +  L VV+D +    A+GI+  L+++ + +
Sbjct: 151 ERGTPLADALDIMNELKVRHLPVVEDAKNKGPALGILTALNVVDYAL 197


>gi|156039609|ref|XP_001586912.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980]
 gi|154697678|gb|EDN97416.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 680

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 113 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEIM 172

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 173 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 213


>gi|154301338|ref|XP_001551082.1| hypothetical protein BC1G_10339 [Botryotinia fuckeliana B05.10]
 gi|150856240|gb|EDN31432.1| hypothetical protein BC1G_10339 [Botryotinia fuckeliana B05.10]
          Length = 622

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 55  IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEIM 114

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 115 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 155


>gi|15899317|ref|NP_343922.1| hypothetical protein SSO2588 [Sulfolobus solfataricus P2]
 gi|284173644|ref|ZP_06387613.1| hypothetical protein Ssol98_03188 [Sulfolobus solfataricus 98/2]
 gi|13815891|gb|AAK42712.1| Hypothetical protein SSO2588 [Sulfolobus solfataricus P2]
 gi|261601077|gb|ACX90680.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 142

 Score = 45.1 bits (105), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 16/114 (14%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVED-- 287
           +VK+G   IDA  I+ +   G V +V+E     GI TE D+ R     KDLN   VE+  
Sbjct: 15  VVKVGTKAIDACKIMYQNNIGSVVIVNEKDYPVGIFTERDVLRAVACGKDLND-KVENLG 73

Query: 288 -----VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                V +K+   I E     +A ++++ +NI  ++VVDD  K IG+V   D++
Sbjct: 74  TFGKLVTVKSNSSIGE-----IAEKMVK-NNIRHIVVVDDEGKLIGVVSIKDIV 121


>gi|209542881|ref|YP_002275110.1| putative XRE family transcriptional regulator [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530558|gb|ACI50495.1| putative transcriptional regulator, XRE family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 150

 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 62/121 (51%), Gaps = 12/121 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE----GDIFRNFHKDLNT 282
           G  +  V+    + D   +LS++R G V V+D    L G+++E    G + R +  D   
Sbjct: 13  GHHVTTVREDMNVADVARLLSDRRIGGVPVLDAAGVLVGLVSERALVGALSR-YGADFAR 71

Query: 283 LSVEDVMIKN-PKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L  EDVM++N P   L++ ++ VA ++   R  ++ VL    +    +G+V   DL++F 
Sbjct: 72  LRAEDVMMRNVPTTSLDEDIVAVARRMTGRRARHVPVL----ENGAVVGLVSIGDLVKFR 127

Query: 340 I 340
           I
Sbjct: 128 I 128


>gi|86153015|ref|ZP_01071220.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88596049|ref|ZP_01099286.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|157415319|ref|YP_001482575.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|85843900|gb|EAQ61110.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88190890|gb|EAQ94862.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|157386283|gb|ABV52598.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|284926288|gb|ADC28640.1| inosine-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747961|gb|ADN91231.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315927934|gb|EFV07256.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315928759|gb|EFV08034.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 305]
 gi|315932194|gb|EFV11137.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|284051004|ref|ZP_06381214.1| multi-sensor hybrid histidine kinase [Arthrospira platensis str.
           Paraca]
          Length = 703

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL- 301
           +  E R  CV VV EG++L GI+T+GDI R     + L  L V +VM  +     E  L 
Sbjct: 56  VYGEARSSCVLVV-EGEQLVGILTQGDIIRLCTEKRPLEQLLVGEVMTASVLSWRESELS 114

Query: 302 -LTVAMQLLRQHNISVLMVVDDCQKAIGIV---------HFLDLLRFGII 341
                + LLR++ I  L +VDD  + +G++         H +DLLR   +
Sbjct: 115 DFFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTV 164


>gi|110669057|ref|YP_658868.1| CBS domain-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109626804|emb|CAJ53272.1| CBS domain protein [Haloquadratum walsbyi DSM 16790]
          Length = 382

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 50/87 (57%), Gaps = 2/87 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V EG +L GI+T  DI +   ++L+ +SVED+   +   + E + L  A+  LR+H+
Sbjct: 93  VAPVFEGNQLYGIVTGEDILQAVLENLDAISVEDIFTDDVVDVAEQSPLGEAINKLREHS 152

Query: 314 ISVLMVV--DDCQKAIGIVHFLDLLRF 338
           IS + VV  D+     GI+   D++ F
Sbjct: 153 ISRVPVVEQDESSSLTGILTTHDIIDF 179


>gi|15790611|ref|NP_280435.1| hypothetical protein VNG1663C [Halobacterium sp. NRC-1]
 gi|169236349|ref|YP_001689549.1| CBS domain-containing protein [Halobacterium salinarum R1]
 gi|10581133|gb|AAG19915.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727415|emb|CAP14203.1| CBS domain protein [Halobacterium salinarum R1]
          Length = 380

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 31/85 (36%), Positives = 44/85 (51%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +A V E   L G+ITE  I      +L+ L V D+  ++   + ED  +   + LLR+H 
Sbjct: 93  IAPVFEAGSLWGVITEDAILDAVLANLDALDVRDIYTEHVVTVDEDDSMGRVINLLREHG 152

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           IS L VVDD     GIV   D++ F
Sbjct: 153 ISRLPVVDDAGLLSGIVTRYDIVDF 177


>gi|262047953|ref|ZP_06020895.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293379821|ref|ZP_06625943.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|260571748|gb|EEX28327.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290923593|gb|EFE00474.1| SIS domain protein [Lactobacillus crispatus 214-1]
          Length = 284

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 48/97 (49%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I GIG S      L   L  +G   F+      +   +   T  D++I  S+SG + E
Sbjct: 133 VYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPKDVMICFSYSGLTQE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           L   +  A++   P++A+T +++S ++  ADI L LP
Sbjct: 193 LLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLP 229


>gi|168700590|ref|ZP_02732867.1| serine phosphatase [Gemmata obscuriglobus UQM 2246]
          Length = 387

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V   CPL D +  ++  R G V V     KL+GI TE D+ R   +       L V   M
Sbjct: 8   VPPSCPLRDVMGEMNRLRIGAVLVTTGEHKLQGIFTERDLLRRVADADPGWRELPVSAWM 67

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
             +P  I  +     A+ L+ Q  +  L VV+D
Sbjct: 68  TPDPITIGPNEAWEAAVSLMEQKRVRHLPVVED 100


>gi|330684495|gb|EGG96211.1| SIS domain protein [Staphylococcus epidermidis VCU121]
          Length = 290

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 56/125 (44%), Gaps = 1/125 (0%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R+ I G G S  + + L   L+  G     V         L      D ++ ++ +G  
Sbjct: 130 NRIFIYGYGASFVVATDLYQKLSRIGMNVQLVQETHIFTTMLASCDSRDCVVFITNNGMQ 189

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E++AI      + IP+I ITS +K++++  +DIVL   +  E+    +  TTS   Q+ 
Sbjct: 190 SEMQAIAKVVVDYHIPIITITSSSKNIISQMSDIVLDYGQSDEN-EMRMGATTSLFAQMF 248

Query: 185 IGDAL 189
             D L
Sbjct: 249 TIDIL 253


>gi|57237943|ref|YP_179191.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni
           RM1221]
 gi|57166747|gb|AAW35526.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni
           RM1221]
 gi|315058500|gb|ADT72829.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|205355813|ref|ZP_03222582.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346247|gb|EDZ32881.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D +  SVE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSN-SVENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|162148241|ref|YP_001602702.1| cystathionine-beta-synthase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786818|emb|CAP56401.1| putative cystathionine-beta-synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 167

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 15/142 (10%)

Query: 209 PGGKLGTLFVCASDVM---HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           P G  G   + AS +      G  +  V+    + D   +LS++R G V V+D    L G
Sbjct: 9   PIGDAGGCIMTASVLQVLDRKGHHVTTVREDMNVADVARLLSDRRIGGVPVLDAAGVLVG 68

Query: 266 IITE----GDIFRNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLL--RQHNISVLM 318
           +++E    G + R +  D   L  EDVM++N P   L++ ++ VA ++   R  ++ VL 
Sbjct: 69  LVSERALVGALSR-YGADFARLRAEDVMMRNVPTTSLDEDIVAVARRMTGRRARHVPVL- 126

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
              +    +G+V   DL++F I
Sbjct: 127 ---ENGAVVGLVSIGDLVKFRI 145


>gi|153952446|ref|YP_001397822.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939892|gb|ABS44633.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|302348349|ref|YP_003815987.1| Putative signal-transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
 gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
          Length = 141

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 52/101 (51%), Gaps = 1/101 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKV 295
             L +A  ++  K  G V VV    K+ GI TE D+ R     ++  S + D+M K+P  
Sbjct: 26  ATLAEAARLMYTKGTGSVVVVSPEGKVIGIFTERDLSRVVADRVSYDSKLGDLMTKDPVT 85

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I +D  +T A++LL    I  L VVD   K +GI+   D++
Sbjct: 86  IRDDEPITKAVELLSTRKIRHLPVVDREGKLVGIITARDIV 126


>gi|172040445|ref|YP_001800159.1| hypothetical protein cur_0765 [Corynebacterium urealyticum DSM
           7109]
 gi|171851749|emb|CAQ04725.1| hypothetical protein cu0765 [Corynebacterium urealyticum DSM 7109]
          Length = 620

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVIL 297
           L DA   + E     + V+D+ ++L+GIIT+ D+ R+   +++  S V + M  NP  + 
Sbjct: 174 LRDAAIRMGEFNVSSLLVIDD-RELRGIITDRDMRRSVAAEISGDSPVSEAMTANPISLG 232

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D L+  AM L+ +  I  + VVDD + A GI+   D++R 
Sbjct: 233 PDALVFEAMLLMAERGIHHIPVVDDGRVA-GIIAAADIMRL 272


>gi|172039120|ref|YP_001805621.1| poly(A) polymerase/tRNA nucleotidyltransferase family protein
           [Cyanothece sp. ATCC 51142]
 gi|171700574|gb|ACB53555.1| poly(A) polymerase/tRNA nucleotidyltransferase family protein
           [Cyanothece sp. ATCC 51142]
          Length = 905

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE   L G+I+  D+    H   +   V+  M KN K I  DTLL     
Sbjct: 347 RYGHSGLSVVDENDHLVGVISRRDLDLALHHGFSHAPVKGYMSKNLKTIHPDTLLPDIES 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +++  L V++D  K IGIV   DLLR
Sbjct: 407 IMVTYDVGRLPVIND-DKLIGIVTRTDLLR 435


>gi|288962996|ref|YP_003453290.1| transcriptional regulator [Azospirillum sp. B510]
 gi|288915262|dbj|BAI76746.1| transcriptional regulator [Azospirillum sp. B510]
          Length = 314

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 15/155 (9%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG----SKLASTLA--STGTPSFFVHA 98
           L+G L            A  GRV I G+G SG +      KL   L   S  T +     
Sbjct: 116 LRGRLDTNALERAAAALARAGRVQIVGVGASGTVALDAHHKLFRLLPQVSASTDAHLQAM 175

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A A+ G        D ++ +S +G+SDE+  +   AR     +IAIT+ + + +A  ADI
Sbjct: 176 AAATLGP------GDALLAISKTGTSDEIFDVAAIARDGGATVIAITA-SATPLAERADI 228

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            LT+  + ++  H   P  S + QLA+ DAL +A+
Sbjct: 229 RLTVDVDEDTAVH--TPMASRLAQLALVDALTVAV 261


>gi|284165432|ref|YP_003403711.1| hypothetical protein Htur_2156 [Haloterrigena turkmenica DSM 5511]
 gi|284015087|gb|ADB61038.1| CBS domain containing membrane protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 385

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 47/87 (54%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V E   L G+IT+  I     ++L+TL+VED+    P  + ED  +  A+  LR+H 
Sbjct: 98  VAPVFENGDLWGVITDDAILEAVLENLDTLTVEDIYTAEPVTLKEDDGIGRAINQLREHG 157

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           IS L V+++     G+V   D+  F I
Sbjct: 158 ISRLPVLNENGYLSGVVTTHDIADFVI 184


>gi|283956455|ref|ZP_06373935.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792175|gb|EFC30964.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|281412866|ref|YP_003346945.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga naphthophila RKU-10]
 gi|281373969|gb|ADA67531.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga naphthophila RKU-10]
          Length = 321

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I+  KR   V VVD+ +++ GI++  DI +         SVE  M KN   + E   L  
Sbjct: 41  IMRIKRISGVPVVDDKKRVVGIVSLEDIIKALEGSYIKDSVEKRMTKNVVCLKETDTLQD 100

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A+++  ++      VVDD +K +GIV   D++ F
Sbjct: 101 AVKIFEKYGYGRFPVVDDEEKLVGIVTKHDIIYF 134


>gi|296534246|ref|ZP_06896730.1| inosine-5'-monophosphate dehydrogenase [Roseomonas cervicalis ATCC
           49957]
 gi|296265433|gb|EFH11574.1| inosine-5'-monophosphate dehydrogenase [Roseomonas cervicalis ATCC
           49957]
          Length = 506

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 239 LIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L +A  +++  R   + VV+ + ++L GI+T  D+   F  D NT     +  +N   + 
Sbjct: 124 LAEAQALMAAHRISGIPVVERDSKRLVGILTYRDV--RFATDPNTRVYGLMTRENLVTVT 181

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D   T A +LL +H I  L+VVDD  + IG++   D+
Sbjct: 182 ADVSPTRARELLHKHRIEKLLVVDDAYRCIGLITVKDM 219


>gi|258576507|ref|XP_002542435.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237902701|gb|EEP77102.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 656

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 52/101 (51%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+ +++ GI T  D+ FR     +    +++ ++M
Sbjct: 99  IKPSTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGIRARDITIAEIM 158

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 159 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 199


>gi|86150453|ref|ZP_01068678.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|86151096|ref|ZP_01069312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|121613583|ref|YP_001000738.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|218562674|ref|YP_002344453.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315124546|ref|YP_004066550.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85839048|gb|EAQ56312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85842266|gb|EAQ59512.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|87249094|gb|EAQ72055.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|112360380|emb|CAL35176.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315018268|gb|ADT66361.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 485

 Score = 44.7 bits (104), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVVDEDKKLIGILTNRDL--RFESDFSNL-VENVMTKMPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|229086866|ref|ZP_04219026.1| transcriptional regulator [Bacillus cereus Rock3-44]
 gi|228696441|gb|EEL49266.1| transcriptional regulator [Bacillus cereus Rock3-44]
          Length = 210

 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        +V     + DAI  +  +  G + VV++   L
Sbjct: 61  FYTGKTGGQLLSEAVKKVKVQDYQSRPVVVDKNISVYDAICTMFLEDVGTLFVVEQATLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  VAM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDVAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 180 VVKDMKQGLEVV 191


>gi|223985075|ref|ZP_03635171.1| hypothetical protein HOLDEFILI_02476 [Holdemania filiformis DSM
           12042]
 gi|223962897|gb|EEF67313.1| hypothetical protein HOLDEFILI_02476 [Holdemania filiformis DSM
           12042]
          Length = 275

 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 8/182 (4%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N ++    R IIA+   +  +      E + Q  C  E + + K ++++ GIG S     
Sbjct: 85  NESMNDTNRKIIAQYHDIVEVTFENNKEETIQQAC--EMLTSAK-KIILFGIGSSNLFCE 141

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            LA+ L   G            +  +    +D ++ ++S SG + E+      A+   +P
Sbjct: 142 YLANQLVKMGLLCVTSQTPHTIYSLIDQSKKDTVLFLISESGETREVIKAASIAKEHDMP 201

Query: 141 LIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           +IA+T   K+ +   AD++L T+  E E+    L  TT    QL + DAL + +++S NF
Sbjct: 202 IIAMTRMAKNTLHSFADLILKTVSFETET---RLNVTTMRCSQLYLIDALYLNIMKS-NF 257

Query: 200 SE 201
           ++
Sbjct: 258 NK 259


>gi|332982531|ref|YP_004463972.1| inosine-5'-monophosphate dehydrogenase [Mahella australiensis 50-1
           BON]
 gi|332700209|gb|AEE97150.1| inosine-5'-monophosphate dehydrogenase [Mahella australiensis 50-1
           BON]
          Length = 488

 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++ + R   V +VDE  KL GIIT  D+    NF + +  +   + +I  P     
Sbjct: 112 DAMALMEKYRISGVPIVDENGKLVGIITNRDVRFETNFDQPIANVMTAENLITAPV---- 167

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A ++LR+H I  L +VD+     G++   D+ +
Sbjct: 168 GTTLEQAQEILRKHKIEKLPLVDENGMLKGLITIKDIEK 206


>gi|327400971|ref|YP_004341810.1| hypothetical protein Arcve_1085 [Archaeoglobus veneficus SNP6]
 gi|327316479|gb|AEA47095.1| protein of unknown function DUF39 [Archaeoglobus veneficus SNP6]
          Length = 490

 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  I+ +K    + VV +G +L GI+T  DI +       T +V ++M +     L D 
Sbjct: 392 EASRIMIQKGVNHLPVVKDG-RLVGIVTSWDIAKAVATK-KTGNVAEIMTRKVITALPDE 449

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +A + + +HNIS L VVD  Q+ IG+V   DL + 
Sbjct: 450 PVEIAARKMEKHNISALPVVDAKQRVIGMVTSEDLSKL 487


>gi|30264367|ref|NP_846744.1| CBS domain-containing protein [Bacillus anthracis str. Ames]
 gi|47529818|ref|YP_021167.1| CBS domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187193|ref|YP_030445.1| CBS domain-containing protein [Bacillus anthracis str. Sterne]
 gi|165872079|ref|ZP_02216719.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167634583|ref|ZP_02392903.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|167638574|ref|ZP_02396850.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|170687433|ref|ZP_02878650.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|170707453|ref|ZP_02897907.1| CBS domain protein [Bacillus anthracis str. A0389]
 gi|177653263|ref|ZP_02935515.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190566870|ref|ZP_03019786.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|229604427|ref|YP_002868586.1| CBS domain protein [Bacillus anthracis str. A0248]
 gi|254684054|ref|ZP_05147914.1| CBS domain-containing protein [Bacillus anthracis str. CNEVA-9066]
 gi|254721888|ref|ZP_05183677.1| CBS domain-containing protein [Bacillus anthracis str. A1055]
 gi|254736402|ref|ZP_05194108.1| CBS domain-containing protein [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741440|ref|ZP_05199127.1| CBS domain-containing protein [Bacillus anthracis str. Kruger B]
 gi|254750878|ref|ZP_05202917.1| CBS domain-containing protein [Bacillus anthracis str. Vollum]
 gi|30259025|gb|AAP28230.1| CBS domain protein [Bacillus anthracis str. Ames]
 gi|47504966|gb|AAT33642.1| CBS domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181120|gb|AAT56496.1| CBS domain protein [Bacillus anthracis str. Sterne]
 gi|164712210|gb|EDR17747.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167513422|gb|EDR88792.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|167530035|gb|EDR92770.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|170127697|gb|EDS96570.1| CBS domain protein [Bacillus anthracis str. A0389]
 gi|170668628|gb|EDT19374.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|172081545|gb|EDT66617.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190561861|gb|EDV15830.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|229268835|gb|ACQ50472.1| CBS domain protein [Bacillus anthracis str. A0248]
          Length = 210

 Score = 44.7 bits (104), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|309780156|ref|ZP_07674907.1| membrane protein, HPP family/CBS domain protein [Ralstonia sp.
           5_7_47FAA]
 gi|308920859|gb|EFP66505.1| membrane protein, HPP family/CBS domain protein [Ralstonia sp.
           5_7_47FAA]
          Length = 394

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M      +L  T +  A++LLRQH    L VVD+ ++ +GIV  
Sbjct: 241 LQAYTRTFQALTCADIMTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTR 300

Query: 333 LDLL 336
           +DLL
Sbjct: 301 VDLL 304


>gi|268590954|ref|ZP_06125175.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291313755|gb|EFE54208.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 283

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 66/155 (42%), Gaps = 13/155 (8%)

Query: 50  SFQFHCAVEKIKAIK---------GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           S +  CA+  + A K          ++VI G G SG +  +    L              
Sbjct: 106 SIEETCALVNLNAFKLANELISKSKKIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYS 165

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                +  + ++DL+IV+S SG + E   +L  AR   +P IAIT   +S V+  A+ VL
Sbjct: 166 IQFSIVNTLDQNDLVIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVL 225

Query: 161 -TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            T+  E  S    L P  S I QL + + L   L 
Sbjct: 226 HTISTEHVS---RLIPIRSKISQLTVINMLITNLF 257


>gi|229019521|ref|ZP_04176338.1| transcriptional regulator [Bacillus cereus AH1273]
 gi|229025763|ref|ZP_04182162.1| transcriptional regulator [Bacillus cereus AH1272]
 gi|228735471|gb|EEL86067.1| transcriptional regulator [Bacillus cereus AH1272]
 gi|228741777|gb|EEL91960.1| transcriptional regulator [Bacillus cereus AH1273]
          Length = 210

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQAILL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|159039488|ref|YP_001538741.1| RpiR family transcriptional regulator [Salinispora arenicola
           CNS-205]
 gi|157918323|gb|ABV99750.1| transcriptional regulator, RpiR family [Salinispora arenicola
           CNS-205]
          Length = 304

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 9/142 (6%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDDLIIVLS 119
           + GR+ + G G SG + S     L   G  +F+   VH+A  S   LG   R D+ + +S
Sbjct: 145 VAGRIDMYGAGASGFVASDFQQKLHRIGRTAFYFPDVHSALTSAALLG---RGDMAVGIS 201

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G++ ++  +L  AR      +A+T+  +S +A  AD++LT      +   G     S 
Sbjct: 202 HTGTTSDVIEVLEQARARGATTVALTNFPRSPIAEVADLLLTTAARETTYRSGA--MASR 259

Query: 180 IMQLAIGDALAIALLESRNFSE 201
           + QL + D L +  + +RN ++
Sbjct: 260 LAQLTVVDCLFVG-VAARNRTQ 280


>gi|187934986|ref|YP_001885745.1| nucleotidyl transferase [Clostridium botulinum B str. Eklund 17B]
 gi|187723139|gb|ACD24360.1| nucleotidyl transferase [Clostridium botulinum B str. Eklund 17B]
          Length = 347

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 53/85 (62%), Gaps = 2/85 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           + +V E +KLKG++T+GDI R   K+ N + S+ ++M K+PK +LE     V  Q+++Q 
Sbjct: 28  IIIVVEDKKLKGVVTDGDIRRWILKNGNISESIYNIMNKSPKYLLETERDNVK-QIMKQF 86

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  + +V++  + + +V + D+ +
Sbjct: 87  KIEAVPIVNEEIEVVDVVFWNDVYQ 111


>gi|126460300|ref|YP_001056578.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126250021|gb|ABO09112.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 281

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 13/133 (9%)

Query: 214 GTLF--VCASDVMHSGD-SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GTL+  +    V   G  S+  V+   P+ + I++     FG + +VDE  +L GI TE 
Sbjct: 72  GTLYSDIYMKSVAEVGTRSVVTVRPNTPVGEVISLFLRHNFGSMPIVDEEGRLVGIFTEW 131

Query: 271 DIFR-----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           D+ +     +F   +  +    V +  P   + D L  + +   R++ I     VD+  K
Sbjct: 132 DVLKLASQLDFPHRVRDVMTRIVYVLTPYSTVMDVLEGITVYKFRRYPI-----VDESGK 186

Query: 326 AIGIVHFLDLLRF 338
            + ++H  D+LR+
Sbjct: 187 VVAMLHAKDVLRY 199


>gi|254450613|ref|ZP_05064050.1| CBS domain pair protein [Octadecabacter antarcticus 238]
 gi|198265019|gb|EDY89289.1| CBS domain pair protein [Octadecabacter antarcticus 238]
          Length = 141

 Score = 44.7 bits (104), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLL 302
           +SEK +G V V+D  +K+ G+ TE D+         D    +V ++M K+P+V  E   +
Sbjct: 1   MSEKNYGAVVVIDADKKVLGVATERDVMNKLVAQELDARKTAVSEIMTKDPRVARETDNM 60

Query: 303 TVAMQLLRQHNISVLMVVDD 322
              ++++       L VVDD
Sbjct: 61  LDWLRIMSNERFRRLPVVDD 80


>gi|296135202|ref|YP_003642444.1| CBS domain containing membrane protein [Thiomonas intermedia K12]
 gi|295795324|gb|ADG30114.1| CBS domain containing membrane protein [Thiomonas intermedia K12]
          Length = 360

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           R+G V  +D    L+G++ +    + + + L+++   D+M ++ +  L D  +T A+  L
Sbjct: 192 RYGEVLDIDRA-TLRGLLEDAQT-QAYQQRLDSVRCSDIMQRDVQTALPDDSVTDALHRL 249

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDL 335
            +H I  L V+D  ++ IGIV   DL
Sbjct: 250 EEHGIKALPVIDAQRQVIGIVTAADL 275


>gi|226327672|ref|ZP_03803190.1| hypothetical protein PROPEN_01545 [Proteus penneri ATCC 35198]
 gi|225204198|gb|EEG86552.1| hypothetical protein PROPEN_01545 [Proteus penneri ATCC 35198]
          Length = 273

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 4/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG SG +   L+  L   G  +              M++  DL IV+S+SG   
Sbjct: 124 RVQIIGIGGSGLVARDLSYKLQKIGITTLIETDHHVQISVAQMLSPKDLQIVISYSGKRK 183

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           ++      A++    +IAIT E  S +   +D +L T+  E E     ++  T+   Q  
Sbjct: 184 DMLVAASVAKKQGAKIIAITGEKHSPLGQISDYILETIADEGEWRSASISSRTA---QNT 240

Query: 185 IGDALAIALLESRN 198
           I D + +ALL+ R+
Sbjct: 241 ITDLIFMALLKKRD 254


>gi|254381614|ref|ZP_04996978.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340523|gb|EDX21489.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 208

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V+ G P  +   +L E     V VVDE ++  G+++E D+ R        NT +    ++
Sbjct: 17  VQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRKRSSGSGANTAA---ALM 73

Query: 291 KNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P +  +     V A +++R H +  L VVD   + IGI+   DLL+ 
Sbjct: 74  TSPAITAQTEWSVVRAARVMRGHQVKRLPVVDAAGQLIGILSRSDLLQL 122


>gi|319957395|ref|YP_004168658.1| 6-phospho 3-hexuloisomerase [Nitratifractor salsuginis DSM 16511]
 gi|319419799|gb|ADV46909.1| 6-phospho 3-hexuloisomerase [Nitratifractor salsuginis DSM 16511]
          Length = 177

 Score = 44.7 bits (104), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 10/137 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ LE  L       F   +++++  K R+ I G G+SG++G   A  L   G  +F V 
Sbjct: 7   LNDLERILSKTDEKAFERFLDRLQPGK-RIFIAGAGRSGYVGKCFAMRLMHLGYEAFVV- 64

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                  +   I  DDL++ +S SG++D +      A       +A+T++  S +A  +D
Sbjct: 65  ----GETNTPSIRPDDLLLAISSSGTTDSVVNAAKKALSHGAETLALTADTSSPLAQKSD 120

Query: 158 IVLTL----PKEPESCP 170
            V+ +    PKE  S P
Sbjct: 121 FVIYIPSNDPKEDGSSP 137


>gi|238750379|ref|ZP_04611880.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia rohdei ATCC
           43380]
 gi|238711310|gb|EEQ03527.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia rohdei ATCC
           43380]
          Length = 295

 Score = 44.7 bits (104), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D+ +  R
Sbjct: 63  GRLIYLGAGTSGRLGILDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDDMSLGER 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D+++ L+ SG +  +   L YAR+   P  AI+    S +A  A + ++ 
Sbjct: 123 DLQALALTAADMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIAQEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|330932518|ref|XP_003303808.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
 gi|311319951|gb|EFQ88097.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
          Length = 666

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++E++M
Sbjct: 105 IKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIM 164

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+     GI+
Sbjct: 165 TKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGIL 205


>gi|189194755|ref|XP_001933716.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979280|gb|EDU45906.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 666

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++E++M
Sbjct: 105 IKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIM 164

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+     GI+
Sbjct: 165 TKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGIL 205


>gi|323699565|ref|ZP_08111477.1| CBS domain containing protein [Desulfovibrio sp. ND132]
 gi|323459497|gb|EGB15362.1| CBS domain containing protein [Desulfovibrio desulfuricans ND132]
          Length = 225

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITE-------------GDIFRNFHKDLNTLSV 285
           ++DA  IL EK      V+D    L GI+++             GD        L TL+ 
Sbjct: 20  VLDAAEILREKNIRQFPVIDSAGSLVGIVSDRDIRDAMPSKFIPGDAVVESGGGLYTLTA 79

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M  +P  +  D  +T    LL +H +  L VVD  +   GI+  LD+LRF
Sbjct: 80  GDIMTLDPISVPSDAAMTEVADLLVKHKVGGLPVVDGGRLE-GIITQLDVLRF 131


>gi|261402971|ref|YP_003247195.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369964|gb|ACX72713.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 418

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P++DA+  + +       +V+   K+ GIIT+ DI     +   +    V  +M +N  
Sbjct: 82  TPVLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIMARVARSKIMKDTKVTKIMTRNVI 141

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L+
Sbjct: 142 TINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDILK 184


>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
 gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 218

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 19/132 (14%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------ 272
            ++DV  + + + ++K G        I+ +K+   + VVD+  KL GII+E D+      
Sbjct: 7   MSTDVATATEDVSMIKAG-------RIMRDKKIRRLPVVDKDGKLVGIISERDLKAASPS 59

Query: 273 ------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                        L+ L V+ +M K+P  I     +  A  ++R      L VVD+  K 
Sbjct: 60  TATSLDMYEMTYLLSELKVKAIMTKDPVRIRRTDTVERAALIMRDRKFGSLPVVDETNKV 119

Query: 327 IGIVHFLDLLRF 338
           +GI+   D+ R 
Sbjct: 120 VGIITDTDIFRL 131



 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 25/35 (71%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           A  I+ +++FG + VVDE  K+ GIIT+ DIFR F
Sbjct: 98  AALIMRDRKFGSLPVVDETNKVVGIITDTDIFRLF 132


>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
 gi|189353318|ref|YP_001948945.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
           multivorans ATCC 17616]
 gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
          Length = 153

 Score = 44.3 bits (103), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  VK    + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVKKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 127


>gi|15679234|ref|NP_276351.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622334|gb|AAB85712.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 281

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 39/127 (30%), Positives = 59/127 (46%), Gaps = 22/127 (17%)

Query: 233 VKIGCPLIDAITILSEK-----------RFGC--VAVVDEGQKLKGIITEGDIFRNFH-- 277
           V IG  + D + ++ E            R G   V VVD   K  GI+TE DI R     
Sbjct: 4   VDIGSIMTDEVIVMDETQQVAYARNLMLRHGISRVVVVDADGKPVGIVTETDITRKLRVN 63

Query: 278 ------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 + ++ +S+  VM +NP  +  +     A +L+ + N+  L+V+D  + A GIV 
Sbjct: 64  GPDWRRRPIDKISIRRVMTENPVTVNVNDTPRDAAELMLRKNVGSLLVMDGEELA-GIVT 122

Query: 332 FLDLLRF 338
             DLLRF
Sbjct: 123 KKDLLRF 129



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           DA  ++  K  G + V+D G++L GI+T+ D+ R F KD       V D+M ++ K +  
Sbjct: 96  DAAELMLRKNVGSLLVMD-GEELAGIVTKKDLLR-FFKDRCAGRWKVRDLMTEDVKTVTP 153

Query: 299 DTLLTVAMQLLRQHNISVLMVVDD 322
           +  L+  + ++ ++NIS ++V D+
Sbjct: 154 NHTLSHVIGVMEENNISRVVVTDN 177


>gi|65321670|ref|ZP_00394629.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
 gi|254757794|ref|ZP_05209821.1| CBS domain-containing protein [Bacillus anthracis str. Australia
           94]
          Length = 211

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 180

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 181 VVKDTKQGLEVI 192


>gi|261206284|ref|XP_002627879.1| CBS and domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
 gi|239592938|gb|EEQ75519.1| CBS and domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
 gi|239610889|gb|EEQ87876.1| CBS and domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 666

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 106 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 165

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 166 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 206


>gi|227828274|ref|YP_002830054.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831032|ref|YP_002832812.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.S.2.15]
 gi|229579913|ref|YP_002838312.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581426|ref|YP_002839825.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|229585503|ref|YP_002844005.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620466|ref|YP_002915292.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284998527|ref|YP_003420295.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.D.8.5]
 gi|227457480|gb|ACP36167.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.S.2.15]
 gi|227460070|gb|ACP38756.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228010628|gb|ACP46390.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012142|gb|ACP47903.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228020553|gb|ACP55960.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381536|gb|ACR42624.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284446423|gb|ADB87925.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.D.8.5]
 gi|323475344|gb|ADX85950.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478069|gb|ADX83307.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 300

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 47/82 (57%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+++ +K+ GI+T  DI + F +   T  V + M  N   I E+  L  A++ +  +N+ 
Sbjct: 208 VINQDEKVVGILTTADIIKAFFEGNYTAKVSEYMKTNVISINENEDLLDAIRKMIIYNVG 267

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L+V+D   KA+GIV   D+LR
Sbjct: 268 RLLVLDSNNKAVGIVTRTDILR 289


>gi|254168446|ref|ZP_04875290.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197622501|gb|EDY35072.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 184

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE 298
           A  ++ E     + VVD+G K+ G+ITE DI   + K    +  L VEDVM   P  +  
Sbjct: 88  ARELMKEHGISQIPVVDKG-KVVGMITEDDILEGYEKHGAGIVDLLVEDVMSSPPIAVRG 146

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           DT +   ++LLRQ     L+VV++  K +GI+   D++  G
Sbjct: 147 DTRMDAIVELLRQEQ--ALLVVEN-DKLVGIITKADIVYKG 184


>gi|148508122|gb|ABQ75916.1| CBS domain protein [uncultured haloarchaeon]
          Length = 382

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V EG +L GI+T  DI     ++L+ +SVED+   +   + E + L  A+  LR+H+
Sbjct: 93  VAPVFEGNQLYGIVTGEDILEAVLENLDAISVEDIFTDDVVDVAEQSPLGEAINKLREHS 152

Query: 314 ISVLMVV--DDCQKAIGIVHFLDLLRF 338
           IS + VV  D+     GI+   D++ F
Sbjct: 153 ISRVPVVEQDESSSLTGILTTHDIIDF 179


>gi|81429251|ref|YP_396252.1| transcriptional regulator [Lactobacillus sakei subsp. sakei 23K]
 gi|78610894|emb|CAI55946.1| Putative transcriptional regulator with a sugarisomerase domain,
           RpiR family [Lactobacillus sakei subsp. sakei 23K]
          Length = 276

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 62/138 (44%), Gaps = 8/138 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ I G+G SG+ G++    L   G  +  V  +        +I + DL+I LS SG+++
Sbjct: 127 QLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRIINKTDLVIGLSNSGNTE 186

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+   +  AR       AITS   S +A  +D+ L +         G A       Q A+
Sbjct: 187 EVNQAVQNARENGAKTAAITSGTDSPLAAASDLTLFVEDSI-----GFASARFVNSQFAL 241

Query: 186 G---DALAIALLESRNFS 200
               D LA+ LLE   ++
Sbjct: 242 TYVIDILAMLLLEDEQYN 259


>gi|327357586|gb|EGE86443.1| CBS and PB1 domain-containing protein [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 663

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 103 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 162

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 163 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 203


>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
 gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
          Length = 149

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  VK    + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 11  SGRTIYTVKKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 70  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 123


>gi|83766852|dbj|BAE56992.1| unnamed protein product [Aspergillus oryzae]
          Length = 287

 Score = 44.3 bits (103), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    ++V ++M
Sbjct: 37  IKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEIM 96

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 97  TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 137


>gi|303243556|ref|ZP_07329898.1| inosine-5'-monophosphate dehydrogenase [Methanothermococcus
           okinawensis IH1]
 gi|302486117|gb|EFL49039.1| inosine-5'-monophosphate dehydrogenase [Methanothermococcus
           okinawensis IH1]
          Length = 492

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  I+ E     + VVD+  +L GIIT  D+    +KD  TL V+D M KN     ED 
Sbjct: 111 DAERIMEEYGISGLPVVDKNDELLGIITTRDVKYISNKD--TL-VKDAMTKNVVYGKEDI 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               AM ++ ++ I  L ++D   K IG++   D+L+
Sbjct: 168 NHEDAMNIMYENRIERLPILDKNNKLIGMITLRDILK 204


>gi|302916341|ref|XP_003051981.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732920|gb|EEU46268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 672

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR        + +++ ++M
Sbjct: 100 IKPATTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAITIAEIM 159

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 160 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 200


>gi|227828412|ref|YP_002830192.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229585641|ref|YP_002844143.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620604|ref|YP_002915430.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|227460208|gb|ACP38894.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228020691|gb|ACP56098.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381674|gb|ACR42762.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|323475485|gb|ADX86091.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478207|gb|ADX83445.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 277

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDT 300
           A+ I+  + FG + VVD   K  GIITE + F   +KDL+ +  V+  M    + I +D 
Sbjct: 96  ALNIMVTRNFGSLPVVDINDKPVGIITERE-FLLLYKDLDEIFPVKVFMSTKVRTIYKDV 154

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A++L+ +     L V++D  K +GI+  ++ +R
Sbjct: 155 RLDQAVRLMLRRGFRRLPVINDDNKVVGIITVVNAIR 191


>gi|87161144|ref|YP_494899.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|257423798|ref|ZP_05600227.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257426478|ref|ZP_05602880.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257429117|ref|ZP_05605504.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257431763|ref|ZP_05608126.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257434723|ref|ZP_05610774.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M876]
 gi|257794658|ref|ZP_05643637.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9781]
 gi|258408738|ref|ZP_05681022.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9763]
 gi|258422336|ref|ZP_05685248.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9719]
 gi|258439726|ref|ZP_05690472.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9299]
 gi|258442718|ref|ZP_05691278.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A8115]
 gi|258446583|ref|ZP_05694738.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6300]
 gi|258450299|ref|ZP_05698391.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6224]
 gi|258452797|ref|ZP_05700793.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5948]
 gi|258455328|ref|ZP_05703288.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5937]
 gi|282893756|ref|ZP_06301988.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A8117]
 gi|282902222|ref|ZP_06310115.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906656|ref|ZP_06314504.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909631|ref|ZP_06317440.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282911876|ref|ZP_06319672.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282915169|ref|ZP_06322946.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282917665|ref|ZP_06325416.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus D139]
 gi|282920895|ref|ZP_06328613.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C427]
 gi|282925199|ref|ZP_06332858.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A9765]
 gi|282925801|ref|ZP_06333449.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C101]
 gi|282926864|ref|ZP_06334491.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A10102]
 gi|283767406|ref|ZP_06340321.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus H19]
 gi|283959096|ref|ZP_06376537.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293497569|ref|ZP_06665423.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293511146|ref|ZP_06669843.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M809]
 gi|293549753|ref|ZP_06672425.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|295428897|ref|ZP_06821521.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|87127118|gb|ABD21632.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|257272816|gb|EEV04918.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257276109|gb|EEV07560.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257279598|gb|EEV10185.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282642|gb|EEV12774.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257285319|gb|EEV15435.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M876]
 gi|257788630|gb|EEV26970.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9781]
 gi|257840421|gb|EEV64881.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9763]
 gi|257841767|gb|EEV66204.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9719]
 gi|257847502|gb|EEV71504.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9299]
 gi|257851839|gb|EEV75773.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A8115]
 gi|257854651|gb|EEV77599.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6300]
 gi|257856391|gb|EEV79300.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6224]
 gi|257859560|gb|EEV82412.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5948]
 gi|257862539|gb|EEV85307.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5937]
 gi|282312630|gb|EFB43034.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C101]
 gi|282315310|gb|EFB45694.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C427]
 gi|282318420|gb|EFB48779.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus D139]
 gi|282320890|gb|EFB51224.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282323572|gb|EFB53888.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282326205|gb|EFB56509.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282329555|gb|EFB59076.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282591315|gb|EFB96388.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A10102]
 gi|282592600|gb|EFB97609.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A9765]
 gi|282596681|gb|EFC01640.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282763814|gb|EFC03942.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A8117]
 gi|283461285|gb|EFC08369.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus H19]
 gi|283788688|gb|EFC27515.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290918800|gb|EFD95876.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291096500|gb|EFE26758.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466133|gb|EFF08662.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M809]
 gi|295127246|gb|EFG56888.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 293

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L     +D +I+++ +G+  E
Sbjct: 135 IFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVILITNNGTQSE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++++     + IP+I ITS   + VA  ++IVLT  K  E+  H +  TTS   Q+   
Sbjct: 195 MQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMH-MGATTSLFAQMFTI 253

Query: 187 DAL 189
           D L
Sbjct: 254 DIL 256


>gi|332521079|ref|ZP_08397537.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
           5H-3-7-4]
 gi|332043172|gb|EGI79369.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
           5H-3-7-4]
          Length = 496

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 91/214 (42%), Gaps = 23/214 (10%)

Query: 141 LIAITSENKSVVA--CHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAI 185
           LIA+T+    +V      D VL +P   E  P  +              P  SA M    
Sbjct: 5   LIAMTAHENKIVGEGLTYDDVLLVPAFSEVLPREVNIQTKFTRNITINVPIVSAAMDTVT 64

Query: 186 GDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
              +AIA+           +  +     K+  +    S ++    ++PL  I   + DA 
Sbjct: 65  ESRMAIAMAREGGIGVLHKNMTIEQQAQKVRRVKRAESGMIIDPVTLPLTAI---VADAK 121

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + + E   G + +VDE   LKGI+T  D+   F    +   VE +  +N     E T L 
Sbjct: 122 SAMREHSIGGIPIVDENGLLKGIVTNRDL--RFEHQNDRPIVEVMTSENLITAAEGTSLK 179

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A ++L+++ I  L++V + +K +G++ F D+ +
Sbjct: 180 DAEKILQENKIEKLLIVKE-EKLVGLITFRDITK 212


>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
 gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
          Length = 153

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 7/109 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKN 292
           G  + DA T+++E+R   V +V EG+ LKGI+TE D+         D  T  +  VM  +
Sbjct: 22  GATVRDAATLMAERRIAAV-LVTEGRALKGIVTERDMTTRVVAAGLDPETTPLSSVMTAD 80

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           P  +        A+ L+ + +   L V  D +  +G+V   DL  F ++
Sbjct: 81  PDTLEPSATALAALDLMERRHYRHLPVAVDGE-VVGMVSIRDL--FAVV 126


>gi|288931499|ref|YP_003435559.1| Cl- channel voltage-gated family protein [Ferroglobus placidus DSM
           10642]
 gi|288893747|gb|ADC65284.1| Cl- channel voltage-gated family protein [Ferroglobus placidus DSM
           10642]
          Length = 583

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V E  KL GIIT  D+ R   +  +++ VE+VM K    I  +  L  A++LL ++ I  
Sbjct: 494 VVENGKLVGIITLEDVLRVPEEKRDSVKVEEVMTKEVITISPEASLEDALRLLEKYKIGR 553

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV+D  K +G++   D++R
Sbjct: 554 LPVVED-SKLVGLITRSDIIR 573


>gi|187927141|ref|YP_001897628.1| CBS domain-containing membrane protein [Ralstonia pickettii 12J]
 gi|187724031|gb|ACD25196.1| CBS domain containing membrane protein [Ralstonia pickettii 12J]
          Length = 382

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M      +L  T +  A++LLRQH    L VVD+ ++ +GIV  
Sbjct: 229 LQAYTRTFQALTCADIMTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTR 288

Query: 333 LDLL 336
           +DLL
Sbjct: 289 VDLL 292


>gi|258423689|ref|ZP_05686576.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9635]
 gi|257846081|gb|EEV70108.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9635]
          Length = 293

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L     +D +I+++ +G+  E
Sbjct: 135 IFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVILITNNGTQSE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++++     + IP+I ITS   + VA  ++IVLT  K  E+  H +  TTS   Q+   
Sbjct: 195 MQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMH-MGATTSLFAQMFTI 253

Query: 187 DAL 189
           D L
Sbjct: 254 DIL 256


>gi|70727418|ref|YP_254334.1| hypothetical protein SH2419 [Staphylococcus haemolyticus JCSC1435]
 gi|68448144|dbj|BAE05728.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 182

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 14/149 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G+SG + +  A  L   G  +F V  +         I   DL ++LS SGS++
Sbjct: 38  RIFTAGKGRSGFMANSFAMRLNQLGKEAFVVGESTTPS-----IKEHDLFVILSGSGSTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK------EPESCPHGLAPTTSA 179
            L+ +   A+     ++ +T+   S +   A+ V+ LP       E    P G     S+
Sbjct: 93  HLRLLAEKAQSIGAKVVLLTTSPDSPIGELAETVIELPAGTKHNVEGSEQPLGSLFEQSS 152

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLH 208
           ++ L   D++ + L+E+ + SE +    H
Sbjct: 153 LLFL---DSVVLGLMETFDISEEEMQNNH 178


>gi|332712128|ref|ZP_08432056.1| chloride channel protein EriC [Lyngbya majuscula 3L]
 gi|332348934|gb|EGJ28546.1| chloride channel protein EriC [Lyngbya majuscula 3L]
          Length = 875

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
            AI   S        VV +G KL GIIT+ DI +N  +      +++VM   P  +  + 
Sbjct: 460 QAIQTFSNSSHRGFPVVAQG-KLVGIITQEDIAKNRDRLPGNTPIKEVMTPQPITVRHND 518

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+  + +L +++++ L V+++ +K +GI+ F D++R
Sbjct: 519 TLSHVLYILNRYHLNRLPVLEN-RKLVGIITFSDIIR 554


>gi|154687061|ref|YP_001422222.1| YtoI [Bacillus amyloliquefaciens FZB42]
 gi|154352912|gb|ABS74991.1| YtoI [Bacillus amyloliquefaciens FZB42]
          Length = 438

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK +    G   V+D+  K+ GI+T  DI  +      ++ +E VM KNP  +
Sbjct: 208 DKLEKWYEKNYETGHGRFPVIDQQMKIHGILTSKDIAGHDR----SVPIEKVMTKNPVTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL V D   K IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVTDGHHKLIGMISRQDVLK 304


>gi|88603447|ref|YP_503625.1| homoserine O-acetyltransferase [Methanospirillum hungatei JF-1]
 gi|88188909|gb|ABD41906.1| homoserine O-acetyltransferase [Methanospirillum hungatei JF-1]
          Length = 490

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           S+P V+    +  A  ++  +    + +V    +L GI+T  DI R+  +D+ TL  ED+
Sbjct: 378 SVPTVRETVTIKGAAALMIAEAVNHLPIVSSDGRLVGIVTSWDISRSVAQDVKTL--EDI 435

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M +          ++ A+  ++++ IS L VVD+  + +GI+
Sbjct: 436 MTRTVLTATPGEHISKAVNRMQKNRISALPVVDEENRVVGII 477


>gi|103486516|ref|YP_616077.1| inosine-5'-monophosphate dehydrogenase [Sphingopyxis alaskensis
           RB2256]
 gi|98976593|gb|ABF52744.1| inosine-5'-monophosphate dehydrogenase [Sphingopyxis alaskensis
           RB2256]
          Length = 485

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL-SVEDVMIKNP 293
            PL DA  ++++ R   + VV+ G KL GI+T  D+    N  + +  L + E++    P
Sbjct: 102 APLSDATALMNQHRISGIPVVESGGKLVGILTHRDVRFADNPGQPVRELMTAENLATVRP 161

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  ++     A +LL Q  I  L+VVDD    IG++   D+
Sbjct: 162 GVGQDE-----ARRLLHQRRIEKLLVVDDDYHCIGLITVKDM 198


>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
 gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
          Length = 174

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 4/115 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS- 284
           GD+I  ++    +  A+  L +KR G + V D+   L+GI++E DI R   +   +TL  
Sbjct: 43  GDAIFAIRPNDTVGHAVEALRDKRIGALVVTDQNGALQGILSERDIVRRLAETPGHTLPQ 102

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M +  K    D LL    +++ +     L VV D  +  G++   D++ F
Sbjct: 103 LVEDIMTREVKTCKPDDLLIDVAKVMNEGRFRHLPVVKD-DRLCGMITVGDVVNF 156


>gi|113460448|ref|YP_718510.1| signal-transduction protein [Haemophilus somnus 129PT]
 gi|112822491|gb|ABI24580.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 648

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 8/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
           +   I LV     L  A   + E+R    A+V +  KL GII + D+ +       D+NT
Sbjct: 185 ANPKIALVDTNTTLQQAAIRMCEQRRSS-ALVMQQNKLIGIIHDRDMTKKVVAQGLDVNT 243

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI-SVLMVVDDCQKAIGIVHFLDLLR 337
           L V ++M  NP VI  D L+  A+ ++ QHNI S+ ++VDD  K  GI+   DL++
Sbjct: 244 L-VTEIMNINPPVIRGDELVLQAISMMMQHNIRSLPVIVDD--KVQGILTATDLVK 296


>gi|22125205|ref|NP_668628.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis KIM 10]
 gi|45442313|ref|NP_993852.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597199|ref|YP_071390.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia
           pseudotuberculosis IP 32953]
 gi|108808358|ref|YP_652274.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis Antiqua]
 gi|108811377|ref|YP_647144.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis
           Nepal516]
 gi|145599540|ref|YP_001163616.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis
           Pestoides F]
 gi|149365380|ref|ZP_01887415.1| putative glucokinase protein [Yersinia pestis CA88-4125]
 gi|153948964|ref|YP_001400124.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia
           pseudotuberculosis IP 31758]
 gi|162420862|ref|YP_001607943.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis Angola]
 gi|165928252|ref|ZP_02224084.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165939266|ref|ZP_02227816.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166008108|ref|ZP_02229006.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166212303|ref|ZP_02238338.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|167399091|ref|ZP_02304615.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167421413|ref|ZP_02313166.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167423169|ref|ZP_02314922.1| glucokinase regulator homolog [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167467715|ref|ZP_02332419.1| hypothetical protein YpesF_07409 [Yersinia pestis FV-1]
 gi|170023495|ref|YP_001720000.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia
           pseudotuberculosis YPIII]
 gi|186896296|ref|YP_001873408.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929980|ref|YP_002347855.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia pestis CO92]
 gi|229838509|ref|ZP_04458668.1| putative glucokinase protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229895512|ref|ZP_04510683.1| putative glucokinase protein [Yersinia pestis Pestoides A]
 gi|229899078|ref|ZP_04514222.1| putative glucokinase protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229901627|ref|ZP_04516749.1| putative glucokinase protein [Yersinia pestis Nepal516]
 gi|270489816|ref|ZP_06206890.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia pestis KIM D27]
 gi|294504518|ref|YP_003568580.1| hypothetical protein YPZ3_2408 [Yersinia pestis Z176003]
 gi|33301930|sp|Q8ZCP8|MURQ_YERPE RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|81638829|sp|Q667V7|MURQ_YERPS RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|123073471|sp|Q1CKD6|MURQ_YERPN RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|123372270|sp|Q1C5E3|MURQ_YERPA RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|166231084|sp|A4TMY1|MURQ_YERPP RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|167017329|sp|A7FFU6|MURQ_YERP3 RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|238687297|sp|A9R410|MURQ_YERPG RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|238688571|sp|B1JRW1|MURQ_YERPY RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|238691449|sp|B2KA40|MURQ_YERPB RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|21958070|gb|AAM84879.1|AE013732_11 putative regulator [Yersinia pestis KIM 10]
 gi|45437177|gb|AAS62729.1| putative glucokinase protein [Yersinia pestis biovar Microtus str.
           91001]
 gi|51590481|emb|CAH22121.1| putative glucokinase protein [Yersinia pseudotuberculosis IP 32953]
 gi|108775025|gb|ABG17544.1| glucokinase protein [Yersinia pestis Nepal516]
 gi|108780271|gb|ABG14329.1| putative glucokinase protein [Yersinia pestis Antiqua]
 gi|115348591|emb|CAL21533.1| putative glucokinase protein [Yersinia pestis CO92]
 gi|145211236|gb|ABP40643.1| glucokinase protein [Yersinia pestis Pestoides F]
 gi|149291793|gb|EDM41867.1| putative glucokinase protein [Yersinia pestis CA88-4125]
 gi|152960459|gb|ABS47920.1| glucokinase regulator-like protein [Yersinia pseudotuberculosis IP
           31758]
 gi|162353677|gb|ABX87625.1| glucokinase regulator homolog [Yersinia pestis Angola]
 gi|165912866|gb|EDR31493.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919759|gb|EDR37092.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165992490|gb|EDR44791.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           E1979001]
 gi|166206234|gb|EDR50714.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           B42003004]
 gi|166960902|gb|EDR56923.1| glucokinase regulator homolog [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167051595|gb|EDR63003.1| glucokinase regulator homolog [Yersinia pestis biovar Antiqua str.
           UG05-0454]
 gi|167057339|gb|EDR67085.1| glucokinase regulator homolog [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|169750029|gb|ACA67547.1| glucokinase regulatory-like protein [Yersinia pseudotuberculosis
           YPIII]
 gi|186699322|gb|ACC89951.1| glucokinase regulatory-like protein [Yersinia pseudotuberculosis
           PB1/+]
 gi|229681556|gb|EEO77650.1| putative glucokinase protein [Yersinia pestis Nepal516]
 gi|229688023|gb|EEO80095.1| putative glucokinase protein [Yersinia pestis biovar Orientalis
           str. India 195]
 gi|229694875|gb|EEO84922.1| putative glucokinase protein [Yersinia pestis biovar Orientalis
           str. PEXU2]
 gi|229701318|gb|EEO89346.1| putative glucokinase protein [Yersinia pestis Pestoides A]
 gi|262362490|gb|ACY59211.1| hypothetical protein YPD4_2304 [Yersinia pestis D106004]
 gi|262366505|gb|ACY63062.1| hypothetical protein YPD8_2387 [Yersinia pestis D182038]
 gi|270338320|gb|EFA49097.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia pestis KIM D27]
 gi|294354977|gb|ADE65318.1| hypothetical protein YPZ3_2408 [Yersinia pestis Z176003]
 gi|320016067|gb|ADV99638.1| putative glucokinase protein [Yersinia pestis biovar Medievalis
           str. Harbin 35]
          Length = 295

 Score = 44.3 bits (103), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D+ +  R
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGAEDDIALGMR 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D+++ L+ SG +  +   L YAR    P  AI+    S +A  A + ++ 
Sbjct: 123 DLQDLQLTATDMVVGLAASGRTPYVIGALRYARELGCPTAAISCNPDSPIAQEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|169618018|ref|XP_001802423.1| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
 gi|160703532|gb|EAT80608.2| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
          Length = 671

 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++E++M
Sbjct: 107 IKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEIM 166

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+     GI+
Sbjct: 167 TKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGIL 207


>gi|254380671|ref|ZP_04996037.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194339582|gb|EDX20548.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 208

 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 48/106 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G P  +   +L E     V VVDE ++  G+++E D+ R         +   +M   
Sbjct: 17  VQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRKRSSGSGANTAAALMTSP 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  A +++R H +  L VVD   + IGI+   DLL+ 
Sbjct: 77  AITARTEWSVVRAARVMRGHQVKRLPVVDAAGQLIGILSRSDLLQL 122


>gi|225560596|gb|EEH08877.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus
           G186AR]
 gi|325088886|gb|EGC42196.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus H88]
          Length = 668

 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 109 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 168

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 169 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 209


>gi|56421284|ref|YP_148602.1| hypothetical protein GK2749 [Geobacillus kaustophilus HTA426]
 gi|56381126|dbj|BAD77034.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 435

 Score = 44.3 bits (103), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V   D++   D    +++  P+     +  E R     VVD+  K++G++T  D+    
Sbjct: 188 IVLVEDILIPLDKTAYLRVHDPIERWYALNKETRHSRFPVVDDELKVQGVVTAKDVL--- 244

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D++  L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+   D+
Sbjct: 245 --DVDRQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDYNRLQGIISRQDV 302

Query: 336 LR 337
           L+
Sbjct: 303 LK 304


>gi|119187931|ref|XP_001244572.1| hypothetical protein CIMG_04013 [Coccidioides immitis RS]
          Length = 655

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 101 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 160

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 161 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 201


>gi|150399812|ref|YP_001323579.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150012515|gb|ABR54967.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 303

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +LSEK    + ++ E +KL GII+  DI     K L    V  +M  N   I +D  +  
Sbjct: 196 VLSEKNISGIPIM-EDKKLLGIISLHDIADAVSKGLENEKVSKIMATNTFTISKDKKIYD 254

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A+ L+ ++N+  L++V++ +  +GI+   D+L+ 
Sbjct: 255 ALILMEKNNVGRLIIVNEYEDTVGIITRTDILKL 288


>gi|15679236|ref|NP_276353.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622336|gb|AAB85714.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 272

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTL 301
           +IL ++ F CV VV  G+KL+GIIT GD+  N     + L    +M + PK+IL  E   
Sbjct: 28  SILRDEDFRCVPVV-AGEKLRGIITRGDVL-NITATKSNLEARGIM-ERPKLILTPEMEA 84

Query: 302 LTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           +  A  L+R   I   +V   +  K +GIV  +D +
Sbjct: 85  MKAAADLVRAGEIQAPVVESTESMKLVGIVSTIDFI 120


>gi|238784193|ref|ZP_04628206.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia bercovieri ATCC
           43970]
 gi|238714902|gb|EEQ06901.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia bercovieri ATCC
           43970]
          Length = 295

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 57/135 (42%), Gaps = 23/135 (17%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEAS 102
           A E +K   GR++  G G SG +G   AS    T             G P   + A E +
Sbjct: 55  AAEALKQ-GGRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGA 113

Query: 103 HGDLGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             D+ +  RD         D+++ L+ SG +  +   L YAR+   P  AI+    S +A
Sbjct: 114 EDDMALGARDLQDLNLTATDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIA 173

Query: 154 CHADIVLTLPKEPES 168
             A + ++    PE+
Sbjct: 174 QEALVAISPVVGPEA 188


>gi|170718018|ref|YP_001783527.1| hypothetical protein HSM_0174 [Haemophilus somnus 2336]
 gi|168826147|gb|ACA31518.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Haemophilus somnus 2336]
          Length = 626

 Score = 44.3 bits (103), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 41/116 (35%), Positives = 62/116 (53%), Gaps = 8/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
           +   I LV     L  A   + E+R    A+V +  KL GII + D+ +       D+NT
Sbjct: 163 ANPKIALVDTNTTLQQAAIRMCEQRRSS-ALVMQQNKLIGIIHDRDMTKKVVAQGLDVNT 221

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI-SVLMVVDDCQKAIGIVHFLDLLR 337
           L V ++M  NP VI  D L+  A+ ++ QHNI S+ ++VDD  K  GI+   DL++
Sbjct: 222 L-VTEIMNINPPVIRGDELVLQAISMMMQHNIRSLPVIVDD--KVQGILTATDLVK 274


>gi|315127532|ref|YP_004069535.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas sp. SM9913]
 gi|315016046|gb|ADT69384.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas sp. SM9913]
          Length = 612

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           ++ E   L G++T+ D+      D      ++  +M   PK I E+  +  A+ L+ +HN
Sbjct: 184 MITENSHLVGVVTDRDLRNRVLADEVDPAQAINSIMTNKPKFIFENNRVFSALHLMLKHN 243

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L V+D+  K +G++   DLLR
Sbjct: 244 IHHLPVLDENHKPLGMITSTDLLR 267


>gi|56964494|ref|YP_176225.1| transcriptional regulator [Bacillus clausii KSM-K16]
 gi|56910737|dbj|BAD65264.1| transcriptional regulator [Bacillus clausii KSM-K16]
          Length = 435

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVDE  +++G+IT  D+F      L    +E VM  +P  + E T +     L+    I 
Sbjct: 227 VVDEAMRVQGMITAKDVFDKPKHWL----IEKVMTGDPITVNERTSIAAVAHLMVWQGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           +L VVD  +K IG+V   D+L+
Sbjct: 283 LLPVVDQQRKLIGVVSRQDVLK 304


>gi|297624020|ref|YP_003705454.1| putative signal transduction protein with CBS domains [Truepera
           radiovictrix DSM 17093]
 gi|297165200|gb|ADI14911.1| putative signal transduction protein with CBS domains [Truepera
           radiovictrix DSM 17093]
          Length = 138

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +++A  +L  +  GC+ VV EG K  GI+T+ DI        +D  T +VE+VM   P V
Sbjct: 20  VLEAAELLRARNVGCLVVV-EGGKPCGILTDRDIALRVVAAGRDPKTTAVEEVMTPRPTV 78

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + E+  L  A+++++   +    VVD   +  G     D+L
Sbjct: 79  LEEELGLFEALEIMKDRGVRRFPVVDRYGQLSGFFTLDDVL 119


>gi|289191829|ref|YP_003457770.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938279|gb|ADC69034.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 418

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P +DA+  + +       +V+   K+ GIIT+ DI     K   +    V  +M +N  
Sbjct: 82  TPFLDAVCEMLDSGQRAAPIVNSVGKMVGIITDYDIMARASKSIIMKDTKVTKIMTRNVI 141

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L
Sbjct: 142 TINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 183


>gi|257870226|ref|ZP_05649879.1| acetoin utilization protein [Enterococcus gallinarum EG2]
 gi|257804390|gb|EEV33212.1| acetoin utilization protein [Enterococcus gallinarum EG2]
          Length = 215

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 55/107 (51%), Gaps = 14/107 (13%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTL 283
             P+ DAI ++ +     + VVD+ Q+L G+ITEG I                +  LN  
Sbjct: 17  AMPIFDAIDLMKKHDIHRLPVVDQ-QRLVGLITEGTIAEAMPSKATSLSVYEMNYLLNKT 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V D+M+K    I  + LL  A+ ++R+ N+ VL V+ D  + +GI+
Sbjct: 76  TVADIMLKKVTTIKPEALLEDAIAVMREENVGVLPVLAD-DELVGII 121


>gi|254294176|ref|YP_003060199.1| inosine-5'-monophosphate dehydrogenase [Hirschia baltica ATCC
           49814]
 gi|254042707|gb|ACT59502.1| inosine-5'-monophosphate dehydrogenase [Hirschia baltica ATCC
           49814]
          Length = 488

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           L D   I  E  F  + VV++G   K+ GIIT  D+   F  DL ++ V ++M      +
Sbjct: 104 LEDVKRIKEEYGFSGIPVVEKGNGGKVVGIITNRDV--RFSDDL-SMPVSELMTTKLVTV 160

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E      A +LL QH I  L+VVDD ++ +G++   D+
Sbjct: 161 REGVSQDDARRLLHQHRIERLIVVDDKERCVGLLTVKDM 199


>gi|303316684|ref|XP_003068344.1| CBS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108025|gb|EER26199.1| CBS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 655

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 101 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 160

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 161 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 201


>gi|39997066|ref|NP_953017.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           PCA]
 gi|39983956|gb|AAR35344.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           PCA]
          Length = 476

 Score = 44.3 bits (103), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI  L     G + +  EG +L G++T+GDI R   + ++     +DV  + P  +   
Sbjct: 144 EAIAQLDRAGTGALVLCSEGDRLHGLLTDGDIRRAVLRGISLDAPCQDVASRRPVTVEPS 203

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                A+ L+ QH+I+ L VVDD  + +  +   DL+
Sbjct: 204 FSAAQALHLMNQHDINHLPVVDDTGRVVDFLLRRDLI 240



 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 24/85 (28%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVI 296
           P+ +AI  L     G + V    +KL G++T+GD+ R   K ++      D+  + P + 
Sbjct: 19  PIAEAIAQLDRAGTGSLVVCSADKKLYGLLTDGDVRRALLKAVDMGAPCGDIANRKPVIT 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVD 321
               L   A++L+  H+I+ L V+D
Sbjct: 79  FVPLLPIEALRLMNHHDINHLPVLD 103


>gi|300855346|ref|YP_003780330.1| hypothetical protein CLJU_c21680 [Clostridium ljungdahlii DSM
           13528]
 gi|300435461|gb|ADK15228.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 125

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 4/121 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-- 279
           ++MHS   I  +K    L  A+ ++ +       VVDE  KL G+I + DI+R   ++  
Sbjct: 4   EIMHS--DIVKLKREDSLHKALDVMYDHNINGAPVVDENGKLTGMIVKADIYRFLMEEGH 61

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +T  V+ VM K+      D  +    + LR+ NI  + V+DD     GI+   D++ + 
Sbjct: 62  YDTCPVDWVMAKDVVTAKSDEDILAVAKRLREKNIVSIPVIDDENTVKGIISIEDIMDYV 121

Query: 340 I 340
           I
Sbjct: 122 I 122


>gi|288561250|ref|YP_003424736.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288543960|gb|ADC47844.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 294

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +++T ++E   G + +VD+  KL GI+TE D        L   +V D+MIK+       T
Sbjct: 118 ESVTKMTENGIGSLPIVDKEGKLVGIVTERDFALALAGSLTNETVGDLMIKDVITTTCGT 177

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    +++ ++N+  + VV++  K +GIV   D+LRF
Sbjct: 178 PIESCSKIMVRNNLRRIPVVEE-DKLVGIVTSTDILRF 214


>gi|305664831|ref|YP_003861118.1| putative inosine-5'-monophosphate dehydrogenase [Maribacter sp.
           HTCC2170]
 gi|88707953|gb|EAR00192.1| putative inosine-5'-monophosphate dehydrogenase [Maribacter sp.
           HTCC2170]
          Length = 490

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 75/169 (44%), Gaps = 13/169 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P  SA M       +AIA+ +     E    VLH    +    +    V  +   + +  
Sbjct: 47  PIVSAAMDTVTESRMAIAIAQ-----EGGIGVLHKNMTIEQQAMKVRKVKRAESGMIIDP 101

Query: 235 IGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  P    + DA   + E   G + +VD+  KL GI+T  D+   F K+ N   + +VM 
Sbjct: 102 VTLPSTALVKDAKANMKEFSIGGIPIVDKMGKLIGIVTNRDL--RFEKN-NERPLSEVMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N   + E T L  A  +L+++ I  L VVD   K +G++ F D+ + 
Sbjct: 159 SENLVTVGEGTSLAEAEDILQENKIEKLPVVDANNKLVGLITFRDITKL 207


>gi|15925305|ref|NP_372839.1| RpiR family transcription regulator [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927895|ref|NP_375428.1| hypothetical protein SA2108 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283965|ref|NP_647053.1| hypothetical protein MW2236 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484531|ref|YP_041755.1| transcription regulator [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487098|ref|YP_044319.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57650857|ref|YP_187115.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus COL]
 gi|82751908|ref|YP_417649.1| transcriptional regulator [Staphylococcus aureus RF122]
 gi|88196232|ref|YP_501051.1| hypothetical protein SAOUHSC_02589 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268752|ref|YP_001247695.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394819|ref|YP_001317494.1| RpiR family transcripitonal regulator [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151222429|ref|YP_001333251.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156980630|ref|YP_001442889.1| hypothetical protein SAHV_2299 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510510|ref|YP_001576169.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141249|ref|ZP_03565742.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253314656|ref|ZP_04837869.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729984|ref|ZP_04864149.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253734273|ref|ZP_04868438.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255007092|ref|ZP_05145693.2| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269203945|ref|YP_003283214.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|284025339|ref|ZP_06379737.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 132]
 gi|294848853|ref|ZP_06789598.1| transcription regulator [Staphylococcus aureus A9754]
 gi|295404996|ref|ZP_06814809.1| transcription regulator [Staphylococcus aureus A8819]
 gi|296276320|ref|ZP_06858827.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MR1]
 gi|297209869|ref|ZP_06926265.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244054|ref|ZP_06927944.1| transcription regulator [Staphylococcus aureus A8796]
 gi|297589613|ref|ZP_06948254.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|300910880|ref|ZP_07128330.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304379503|ref|ZP_07362238.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|13702115|dbj|BAB43407.1| SA2108 [Staphylococcus aureus subsp. aureus N315]
 gi|14248089|dbj|BAB58477.1| similar to transcription regulator RpiR family [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21205407|dbj|BAB96101.1| MW2236 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242660|emb|CAG41381.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49245541|emb|CAG44019.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57285043|gb|AAW37137.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus COL]
 gi|82657439|emb|CAI81881.1| probable transcriptional regulator [Staphylococcus aureus RF122]
 gi|87203790|gb|ABD31600.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741821|gb|ABQ50119.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149947271|gb|ABR53207.1| helix-turn-helix protein RpiR [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375229|dbj|BAF68489.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156722765|dbj|BAF79182.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369319|gb|ABX30290.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253726197|gb|EES94926.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253727767|gb|EES96496.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|262076235|gb|ACY12208.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|269941901|emb|CBI50312.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TW20]
 gi|285817978|gb|ADC38465.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           04-02981]
 gi|294824232|gb|EFG40656.1| transcription regulator [Staphylococcus aureus A9754]
 gi|294969941|gb|EFG45959.1| transcription regulator [Staphylococcus aureus A8819]
 gi|296885542|gb|EFH24479.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178832|gb|EFH38077.1| transcription regulator [Staphylococcus aureus A8796]
 gi|297578124|gb|EFH96837.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|298695574|gb|ADI98796.1| probable transcriptional regulator [Staphylococcus aureus subsp.
           aureus ED133]
 gi|300887860|gb|EFK83055.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333948|gb|ADL24141.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302752186|gb|ADL66363.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304342035|gb|EFM07939.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312437271|gb|ADQ76342.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830661|emb|CBX35503.1| helix-turn-helix domain, rpiR family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129599|gb|EFT85590.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193575|gb|EFU23971.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198147|gb|EFU28478.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140144|gb|EFW32003.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320143414|gb|EFW35195.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329315001|gb|AEB89414.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329723419|gb|EGG59948.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329728138|gb|EGG64578.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329730432|gb|EGG66822.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 290

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L     +D +I+++ +G+  E
Sbjct: 132 IFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVILITNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++++     + IP+I ITS   + VA  ++IVLT  K  E+  H +  TTS   Q+   
Sbjct: 192 MQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMH-MGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|302039080|ref|YP_003799402.1| hypothetical protein NIDE3802 [Candidatus Nitrospira defluvii]
 gi|300607144|emb|CBK43477.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 145

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 53/94 (56%), Gaps = 3/94 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLL 302
           +LSE  FG V V +    L+G++TE D+ +     +DL  +SV ++M ++     E+  L
Sbjct: 41  LLSEHNFGSVPVTETDGTLRGLVTEFDLLKAVEQGRDLREVSVSEIMTRDVITTTEEMPL 100

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + +L++ ++  L VV D +K IG+V   D++
Sbjct: 101 MNLIHVLQERHLIRLPVVKD-RKLIGMVARRDIV 133


>gi|295425813|ref|ZP_06818494.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295064506|gb|EFG55433.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 282

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFF---VH-AAEASHGDLGMITRDDLIIVLSWSG 122
           + + G+  SG     L   L   G  +F+   VH A E S+      T  D++I+ S+SG
Sbjct: 132 IYLEGVAASGLPAKDLYYKLIRIGRKAFYDDDVHIALEQSY----FTTPKDVMIIFSYSG 187

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            ++E+      A     P+IAIT ++ S ++  A I+L LP
Sbjct: 188 QTEEILLAARQAHHNQTPIIAITRDSNSALSQLASIILPLP 228


>gi|126460347|ref|YP_001056625.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126250068|gb|ABO09159.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 286

 Score = 44.3 bits (103), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 231 PLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           P+V K   PL + I +  EKR+  + V+DE ++  G++T   +            V D M
Sbjct: 170 PIVAKPSDPLGNYIRLFIEKRYRGIPVIDESKRPIGLLTASKVMEAVASCRLDAKVGDYM 229

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + NP  + E+  +   ++L+    I  ++VVD   + +GI+   D+L
Sbjct: 230 MPNPPTVHEEEDIHEVIRLMVTSGIGRVLVVDSEDRLVGIITRTDVL 276


>gi|320038151|gb|EFW20087.1| CBS and PB1 domain-containing protein [Coccidioides posadasii str.
           Silveira]
          Length = 655

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 101 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 160

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 161 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 201


>gi|260773956|ref|ZP_05882871.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
 gi|260610917|gb|EEX36121.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
          Length = 623

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 44/80 (55%), Gaps = 2/80 (2%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTV 304
            E RF   AV+    ++ GI+T+ D+ RN     +N T  +  VM KNP++I  D  +  
Sbjct: 185 EEGRFSSCAVITRQDEIVGIVTDRDMTRNVVAAAVNITQPIRHVMTKNPQLIHADDKVIQ 244

Query: 305 AMQLLRQHNISVLMVVDDCQ 324
           A+ ++ Q+NI  L VV+  Q
Sbjct: 245 AISIMLQYNIRCLPVVNGNQ 264


>gi|295696937|ref|YP_003590175.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
 gi|295412539|gb|ADG07031.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
          Length = 139

 Score = 44.3 bits (103), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 37/98 (37%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVIL 297
           DA  ++++   G V VVD+  KL GI T+ DI        KD  T +V+D M  NP    
Sbjct: 22  DAARVMNDINVGSVPVVDK-DKLVGICTDRDIVLKCIAAGKDPATTAVKDCMTANPITGT 80

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D     A  L+ QH I  L VVD   K +G+V   DL
Sbjct: 81  PDMDAHQASDLMSQHQIRRLPVVDQ-GKLVGMVAIGDL 117


>gi|322834121|ref|YP_004214148.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321169322|gb|ADW75021.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 66/131 (50%), Gaps = 4/131 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++V++GIG SG +   LA  L   G  +            +  ++++DL++ +S+SG  +
Sbjct: 134 KIVLSGIGASGLVAKDLAYKLLKIGVTAIAESDTHVLVATVQALSKEDLLLAISFSGERN 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      AR     ++AIT  + + +   AD  L T+ + P +    L+ TT+   Q +
Sbjct: 194 EINLAAKVARESGAKVLAITGFSPNTLQQQADHCLYTVAELPATRGAALSATTA---QYS 250

Query: 185 IGDALAIALLE 195
           + D L +AL++
Sbjct: 251 LTDLLFVALVQ 261


>gi|29828417|ref|NP_823051.1| oxidoreductase [Streptomyces avermitilis MA-4680]
 gi|29605520|dbj|BAC69586.1| putative oxidoreductase [Streptomyces avermitilis MA-4680]
          Length = 148

 Score = 43.9 bits (102), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 56/106 (52%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    L++A  ++  +  G V V  + Q+L G++T+ DI  R      D  T+S + V 
Sbjct: 16  VRPDASLVEAAQLMRAQDVGDVLVTLD-QQLVGVLTDRDIALRAVADGVDPRTVSAQGVC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             NP VI  D  ++ A+ L+R+H +  L VV+D    +G+V   DL
Sbjct: 75  TTNPVVIGPDEPVSAAVALMREHTVRRLPVVEDGHP-VGMVSLGDL 119


>gi|170757052|ref|YP_001782919.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum B1
           str. Okra]
 gi|169122264|gb|ACA46100.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum B1
           str. Okra]
          Length = 484

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKEG-KLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|148381239|ref|YP_001255780.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 3502]
 gi|153932667|ref|YP_001385614.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937299|ref|YP_001389020.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. Hall]
 gi|148290723|emb|CAL84854.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928711|gb|ABS34211.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 19397]
 gi|152933213|gb|ABS38712.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. Hall]
          Length = 484

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKEG-KLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|119872130|ref|YP_930137.1| CBS domain-containing protein [Pyrobaculum islandicum DSM 4184]
 gi|119673538|gb|ABL87794.1| CBS domain containing membrane protein [Pyrobaculum islandicum DSM
           4184]
          Length = 280

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 10/107 (9%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSVEDVMIK 291
            PL + I +     FG + +VDE  +L GI TE D+ +     +F   +  +    V + 
Sbjct: 96  TPLGEVIALFLRHNFGSMPIVDETGRLVGIFTEWDVLKVASQLDFPHRVRDVMTRIVYVL 155

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P   + D L  + +   R++ I     VD+  K I ++H  D+LR+
Sbjct: 156 TPYSTVMDVLEGITIYKFRRYPI-----VDETGKVIAMLHAKDVLRY 197


>gi|331220075|ref|XP_003322713.1| CBS and PB1 domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309301703|gb|EFP78294.1| CBS and PB1 domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 746

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 49/107 (45%), Gaps = 7/107 (6%)

Query: 231 PLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTL 283
           PL  +  P    + DA  + + KR  CV VVDE + L GI T  D+ FR      D  T 
Sbjct: 133 PLPALTVPDNITVADASQLCAAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGMDPRTT 192

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            V  +M +NP V  + T  T A+  +       L V +D    IG++
Sbjct: 193 PVSAIMTRNPMVTRDTTSATEALTTMVTRGFRHLPVCNDEGDVIGLL 239


>gi|320100379|ref|YP_004175971.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
 gi|319752731|gb|ADV64489.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
          Length = 320

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 17/100 (17%)

Query: 256 VVDEGQKLKGIITEGDI---------FR--------NFHKDLNTLSVEDVMIKNPKVILE 298
           V D G++L+G++T GDI         +R        N +  L   +V+ +M+KNP  +  
Sbjct: 73  VSDSGRRLRGLLTLGDIVSYLGGGEYYRIVAERHAYNIYSALERETVDTIMVKNPIHLYV 132

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  LT  ++ +  H I V+ V+D      GI+   DL+R+
Sbjct: 133 DDTLTRVLESMIIHGIGVVPVLDRDGAVYGIITEHDLVRY 172


>gi|15669594|ref|NP_248407.1| hypothetical protein MJ_1404 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496177|sp|Q58799|Y1404_METJA RecName: Full=Uncharacterized protein MJ1404
 gi|1592053|gb|AAB99421.1| hypothetical protein MJ_1404 [Methanocaldococcus jannaschii DSM
           2661]
          Length = 421

 Score = 43.9 bits (102), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 2/102 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P +DA+  + +       +V+   K+ GIIT+ DI     K   +    V  +M +N  
Sbjct: 85  TPFLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIMARAAKSKIMKDTKVTKIMTRNVI 144

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L
Sbjct: 145 TINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 186


>gi|325959703|ref|YP_004291169.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325331135|gb|ADZ10197.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 293

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 55/97 (56%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           +A  ILS++      VV++G  + GI+T  DI R   +     +V +VM  KN   + +D
Sbjct: 191 NASKILSDRDIEGAPVVEDGHVI-GILTLSDIIRAIGRGDEEQNVSEVMSSKNIITVKQD 249

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  A++++ +++I  ++VVDD    IGIV   DLL
Sbjct: 250 LMIADAIEIMNKNSIGRVIVVDDDASPIGIVTRTDLL 286


>gi|213964905|ref|ZP_03393104.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium amycolatum
           SK46]
 gi|213952441|gb|EEB63824.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium amycolatum
           SK46]
          Length = 515

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 53/214 (24%), Positives = 89/214 (41%), Gaps = 30/214 (14%)

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPL+ +T ++          VL LP   +  P G+  +T    +L +   +  A +++  
Sbjct: 23  IPLVGLTFDD----------VLLLPDASDVIPSGVDTSTQLTRELRLNIPIVSAAMDTVT 72

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----------IGCPLIDAITILSE 248
            +     +   GG +G L    S +      + +VK          + C   D I  +  
Sbjct: 73  EARMAVAMARQGG-MGILHRNLS-IEEQAQQVEIVKRSEAGMVSDPVTCSPDDTIAEVDA 130

Query: 249 K----RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-T 303
           K    R   + VVD+  KL GI T  D+   F  DLN   V ++M   P V+ E  +   
Sbjct: 131 KCARYRISGLPVVDKDGKLVGICTNRDM--RFEADLNR-KVSEIMTPMPLVVAEQGVSGD 187

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ LLR H +  L +VD   +  G++   D ++
Sbjct: 188 AALNLLRAHKVEKLPIVDGEGRLTGLITVKDFVK 221


>gi|164511604|emb|CAO86108.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511606|emb|CAO86109.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
          Length = 484

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKEG-KLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|40890003|pdb|1VIM|A Chain A, Crystal Structure Of An Hypothetical Protein
 gi|40890004|pdb|1VIM|B Chain B, Crystal Structure Of An Hypothetical Protein
 gi|40890005|pdb|1VIM|C Chain C, Crystal Structure Of An Hypothetical Protein
 gi|40890006|pdb|1VIM|D Chain D, Crystal Structure Of An Hypothetical Protein
          Length = 200

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 39/155 (25%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG+I    A  L   G   + V            IT  D+++ +S SG +  
Sbjct: 50  IFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGETVTPR-----ITDQDVLVGISGSGETTS 104

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLT----LPKEPESCPHGLAP--TTSAI 180
           +  I   A+     L+A+T +  S +A  AD+V+     + +E +     LAP  T   +
Sbjct: 105 VVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFEL 164

Query: 181 MQLAIGDALAIALLESRNFSENDFY----VLHPGG 211
             +   DAL   ++  ++ +E D      VL  GG
Sbjct: 165 TAMIFLDALVAEIMMQKHLTEKDLEARHAVLEEGG 199


>gi|119387376|ref|YP_918410.1| RpiR family transcriptional regulator [Paracoccus denitrificans
           PD1222]
 gi|119377951|gb|ABL72714.1| transcriptional regulator, RpiR family [Paracoccus denitrificans
           PD1222]
          Length = 280

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 59/130 (45%), Gaps = 1/130 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G G SG + S+    LA+   P+              ++   DL+ VLS+SG + 
Sbjct: 146 RVDIYGYGSSGFMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDLLFVLSFSGLTS 205

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            L + +  AR+   P++AI S   S+VA  AD+ L L    +S      PT        +
Sbjct: 206 YLISNIEIARKAGAPVLAI-SPKGSIVASLADVNLNLNAYRQSSGRMAVPTGRVAPMYVL 264

Query: 186 GDALAIALLE 195
            DAL  A+ E
Sbjct: 265 LDALFAAMAE 274


>gi|283471535|emb|CAQ50746.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 290

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L     +D +I+++ +G+  E
Sbjct: 132 IFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVILITNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++++     + IP+I ITS   + VA  ++IVLT  K  E+  H +  TTS   Q+   
Sbjct: 192 MQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGKTDENEMH-MGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|240280165|gb|EER43669.1| CBS and PB1 protein [Ajellomyces capsulatus H143]
          Length = 612

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 53  IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 112

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 113 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 153


>gi|237653285|ref|YP_002889599.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237624532|gb|ACR01222.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 480

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/104 (36%), Positives = 50/104 (48%), Gaps = 6/104 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTLSVEDVMIKNPK 294
           L+D +  + E    CV VVD G     I+T+ D+ RN      +D   L V DVM     
Sbjct: 28  LVDIVGRMREMSISCVVVVD-GAHPTAILTDRDL-RNKVIAAGRDPAGLRVRDVMSAPVI 85

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I ED +L  A+  + +H I  L+VVD      GIV   DLLR 
Sbjct: 86  TIGEDDVLYEALYRMSRHGIHRLVVVDRKGALAGIVTVTDLLRL 129


>gi|153939002|ref|YP_001392641.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. Langeland]
 gi|168179057|ref|ZP_02613721.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum NCTC
           2916]
 gi|226950721|ref|YP_002805812.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A2
           str. Kyoto]
 gi|152934898|gb|ABS40396.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. Langeland]
 gi|164511608|emb|CAO86110.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511610|emb|CAO86111.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511612|emb|CAO86112.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511614|emb|CAO86113.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511616|emb|CAO86114.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511618|emb|CAO86115.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|182670010|gb|EDT81986.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum NCTC
           2916]
 gi|226843490|gb|ACO86156.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A2
           str. Kyoto]
 gi|295320626|gb|ADG01004.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. 230613]
          Length = 484

 Score = 43.9 bits (102), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKEG-KLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|27377873|ref|NP_769402.1| hypothetical protein blr2762 [Bradyrhizobium japonicum USDA 110]
 gi|152198|gb|AAA26202.1| putative [Bradyrhizobium japonicum]
 gi|3021313|emb|CAA06278.1| hypothetical protein [Bradyrhizobium japonicum]
 gi|27351019|dbj|BAC48027.1| blr2762 [Bradyrhizobium japonicum USDA 110]
          Length = 141

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 11/96 (11%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLSVEDVMIKNPKVILEDT 300
           F    V D+GQ + GI+T+ DI + F          + DL +  + DVM      +  DT
Sbjct: 38  FNSYPVEDDGQVV-GIVTKFDILKCFAFTPSQMLPRYHDLMSRKIGDVMTPEFIYVSPDT 96

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            LT  +Q++ +H I  ++V+D  QK +GI+   D++
Sbjct: 97  RLTRVLQIMVEHRIRSIIVLDGAQKLVGIIAREDVI 132


>gi|313126729|ref|YP_004036999.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293094|gb|ADQ67554.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 139

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V +   L +A+  + E+R G V V+D G     I+T  D     ++D   L  ++V DVM
Sbjct: 14  VTLDATLREAVRSMLERRVGSVVVLDTGPI--SIVTRSDALWGTYQDGGSLADIAVTDVM 71

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++  +  E T +T A+  ++QH +  L  V D  + +GI+   D+
Sbjct: 72  SRDLVMTTEQTSITTALDTMKQHEVKKL-PVRDGMELVGIITMTDI 116


>gi|296241835|ref|YP_003649322.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
 gi|296094419|gb|ADG90370.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
          Length = 141

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 216 LFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           L V A+DVM +    P+  +   P+ +    + E     V VVD   +L GI+TE D+  
Sbjct: 10  LPVRATDVMSTP---PITAEETMPIEEVAKKMFENNVSSVMVVDSTGRLVGIVTEKDVVG 66

Query: 275 N--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                K  + L V   M +NP  +  DT L   ++ +R+ NI  L VVD   K IG+V
Sbjct: 67  AVAIGKIGSNLPVARFMKENPITVTPDTPLDEVLEKMRRFNIRHLPVVDKDGKPIGMV 124


>gi|228474657|ref|ZP_04059388.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis SK119]
 gi|228271320|gb|EEK12688.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis SK119]
          Length = 290

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           L    ++D ++ ++ SG   EL+A++   + F++ +I ITS N + +A  +D+VLT  ++
Sbjct: 171 LSTHNKNDCVVFITNSGEQSELQAMVKVVKDFNLSMITITSSNNNSIAKDSDLVLTYNED 230

Query: 166 --PESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
              E C   ++ TT+   QL   D +    + +RN+
Sbjct: 231 YKNELC---MSATTALFAQLYTIDIIFYRFI-ARNY 262


>gi|327400808|ref|YP_004341647.1| 6-phospho 3-hexuloisomerase [Archaeoglobus veneficus SNP6]
 gi|327316316|gb|AEA46932.1| 6-phospho 3-hexuloisomerase [Archaeoglobus veneficus SNP6]
          Length = 196

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 14/160 (8%)

Query: 58  EKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E IKAI+G  ++ + G G+SG +    A  L   G   + V            I RDD++
Sbjct: 38  ELIKAIEGANKIFVMGAGRSGFVAKAFAMRLMHLGYNVYVVGETVTPR-----IGRDDVL 92

Query: 116 IVLSWSGSSDELKAILYYARRF-SIPLIAITSENKSVVACHADIVLTL----PKEPESCP 170
           I +S SG +  +  I   A+      L+AIT    S +A  +D+V+ L      + +   
Sbjct: 93  ISISGSGETTSVVNISRKAKELIGSKLVAITQNKDSTLARMSDVVVLLRAKDKTQKDENL 152

Query: 171 HGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             +AP  T   +  L   D L   L+  ++ +E D    H
Sbjct: 153 SSIAPLGTMFELTALIFLDGLVAELMSLKSLTERDLEQRH 192


>gi|314935778|ref|ZP_07843130.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis subsp. hominis C80]
 gi|313656343|gb|EFS20083.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis subsp. hominis C80]
          Length = 290

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 53/96 (55%), Gaps = 6/96 (6%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           L    ++D ++ ++ SG   EL+A++   + F++ +I ITS N + +A  +D+VLT  ++
Sbjct: 171 LSTHNKNDCVVFITNSGEQSELQAMVKVVKDFNLSMITITSSNNNSIAKDSDLVLTYNED 230

Query: 166 --PESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
              E C   ++ TT+   QL   D +    + +RN+
Sbjct: 231 YKNELC---MSATTALFAQLYTIDIIFYRFI-ARNY 262


>gi|229544986|ref|ZP_04433711.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
 gi|229309878|gb|EEN75865.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
          Length = 197

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+IK     + + G G+SG      A+ L   G     V    + H   G     DL+I
Sbjct: 41  VEQIKQAN-HIFLNGAGRSGIAIRAFANRLMHIGFSVSIVGEISSPHSKPG-----DLLI 94

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP----KEPESCPHG 172
           + S SG +  LK++   A++  I L  +T + +S +   AD+VL LP    +E +     
Sbjct: 95  ICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLADVVLVLPGTTKEENDRETAS 154

Query: 173 LA-PTTSAIMQLA 184
            A P  SA  QLA
Sbjct: 155 FAQPMGSAFEQLA 167


>gi|238788218|ref|ZP_04632013.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           frederiksenii ATCC 33641]
 gi|238723805|gb|EEQ15450.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           frederiksenii ATCC 33641]
          Length = 280

 Score = 43.9 bits (102), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 72/149 (48%), Gaps = 5/149 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A+E +K  + RV++TG+G SG +   LA  L   G  +       A    +  +   DL+
Sbjct: 123 ALEMLKGAQ-RVILTGLGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDTRDLL 181

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLA 174
           + +S+SG   E+      A+R    ++A+TS   + +   AD  L T+ +EP      ++
Sbjct: 182 LAISFSGERREINLAAEEAQRCGAKVLALTSFTPNSLQQRADHCLYTISEEPVIRSAAIS 241

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSEND 203
            +T+   Q A+ D L +A+++    S  D
Sbjct: 242 SSTA---QYALTDLLFMAMIQQNLESAQD 267


>gi|256961117|ref|ZP_05565288.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|256951613|gb|EEU68245.1| sugar isomerase [Enterococcus faecalis Merz96]
          Length = 184

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+IK     + + G G+SG      A+ L   G     V    + H   G     DL+I
Sbjct: 28  VEQIKQAN-HIFLNGAGRSGIAIRAFANRLMHIGFSVSIVGEISSPHSKPG-----DLLI 81

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP----KEPESCPHG 172
           + S SG +  LK++   A++  I L  +T + +S +   AD+VL LP    +E +     
Sbjct: 82  ICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLADVVLVLPGTTKEENDRETAS 141

Query: 173 LA-PTTSAIMQLA 184
            A P  SA  QLA
Sbjct: 142 FAQPMGSAFEQLA 154


>gi|108743437|dbj|BAE95540.1| putative oxidoreductase [Streptomyces kanamyceticus]
          Length = 146

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-- 278
           DVM +G  + +V+    L++A  ++  +  G V V   G ++ G++T+ DI  R      
Sbjct: 7   DVMTTG--VVVVRPDASLVEAAQLMRAQDIGDVLVA-VGGRILGVLTDRDITLRAVADGA 63

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T+S + +   NP V+  D  ++ A+ L+R H +  L VV+D  + +G+V   DL
Sbjct: 64  DPLTVSAQAICTPNPVVVTPDDAVSAAVDLMRDHAVRRLPVVED-GRPVGMVSLGDL 119


>gi|117618945|ref|YP_854938.1| RpiR family transcriptional regulator [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560352|gb|ABK37300.1| transcriptional regulator, RpiR family [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 286

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 10/138 (7%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITRDDLIIVLSWS 121
           GRV + GIG S      L   L   G  + F   A+ SH  + +   +   D+ +V+S+S
Sbjct: 136 GRVQLVGIGGSALTAKDLWYKLLKIGVTTLF---AQDSHVQISIAQTLGPGDVQLVVSYS 192

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAI 180
           G+S ++ A    A+R    LIA+TS   + +   AD+VL T+  E E     ++  T+  
Sbjct: 193 GASRDVLAAAELAKRNGATLIAVTSFRNTPLRQMADMVLDTVADENELRISSISSRTA-- 250

Query: 181 MQLAIGDALAIALLESRN 198
            Q  I D L + L++ R+
Sbjct: 251 -QNTITDILFLGLVQRRD 267


>gi|312136318|ref|YP_004003655.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224037|gb|ADP76893.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 293

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A  ILSE +     VV +G K+ GI+T  DI  +  K      + ++M K    + +DT 
Sbjct: 193 AAKILSENKIDGAPVVSKG-KVVGIVTLTDIVNSVAKKKEKCKISEIMSKRVITVEKDTN 251

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+ ++ ++NI  L++VD+  K +GIV   D+L
Sbjct: 252 IYDAINIMTENNIGRLIIVDNG-KPVGIVTRTDIL 285


>gi|317126752|ref|YP_004093034.1| inosine-5'-monophosphate dehydrogenase [Bacillus cellulosilyticus
           DSM 2522]
 gi|315471700|gb|ADU28303.1| inosine-5'-monophosphate dehydrogenase [Bacillus cellulosilyticus
           DSM 2522]
          Length = 485

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  ++S+ R   V + DE QKL GIIT  D+   F +D  ++ ++DVM K   V   
Sbjct: 108 VFDAEHLMSKYRISGVPIADENQKLVGIITNRDL--RFIEDY-SIPIKDVMTKEGLVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L+++ I  L +VDD     G++   D+
Sbjct: 165 VGTTLAEAQKVLQKYKIEKLPLVDDNGVLKGLITIKDI 202


>gi|154278497|ref|XP_001540062.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413647|gb|EDN09030.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 403

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR     +    +++ ++M
Sbjct: 109 IKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIM 168

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 169 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 209


>gi|73663456|ref|YP_302237.1| 6-phospho-3-hexuloisomerase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495971|dbj|BAE19292.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 182

 Score = 43.9 bits (102), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            +V + G G+SG + +  A  L   G  +  V  +         IT+DDL +V+S SGS+
Sbjct: 37  NQVFVAGKGRSGFVANSFAMRLNQLGKYAHVVGESTTPS-----ITKDDLFVVISGSGST 91

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           + L+ +   A+     ++ +T+   S +   A+ V+ LP
Sbjct: 92  EHLRILTEKAKSVGAEVVLLTTSPNSAIGKLANAVIELP 130


>gi|300713151|ref|YP_003739190.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299060222|emb|CAX53472.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 118

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 3/119 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M +   IP V     + DA+  L+    G VAV DE  +L G+ T+GD+ R   +   TL
Sbjct: 1   MRTEAKIPQVFETVTVHDAMFELTRTGLGLVAVKDEMHRLSGVFTDGDLRRWLLRG-GTL 59

Query: 284 S--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           S  V D M      +  + L   A+    +  IS   V  +  + IG ++  D+   GI
Sbjct: 60  SAPVADAMTSPGFTLSANQLAAEALDFFHKRKISAAPVTSETGRVIGAINAHDIREAGI 118


>gi|224438388|ref|ZP_03659315.1| inosine 5'-monophosphate dehydrogenase [Helicobacter cinaedi CCUG
           18818]
 gi|313144830|ref|ZP_07807023.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818]
 gi|313129861|gb|EFR47478.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818]
          Length = 481

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVDE  KL GI+T  D+   F +DLN   V D+M K+  +  +
Sbjct: 105 LADAKAITDNYKISGVPVVDEYGKLIGILTNRDV--RFEQDLNK-RVGDLMTKDSLITAK 161

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A +++ +H I  L +VD+     G++   D+ +
Sbjct: 162 VGTTLEEAKEIMHKHRIEKLPIVDENYTLKGLITIKDIQK 201


>gi|322367947|ref|ZP_08042516.1| peptidase M50 [Haladaptatus paucihalophilus DX253]
 gi|320551963|gb|EFW93608.1| peptidase M50 [Haladaptatus paucihalophilus DX253]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 2/125 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V   DVM   + +  V     + D +  +  +R     V+D+G+ L G+IT  D      
Sbjct: 248 VRVRDVMTGAEDLHTVSSDMSIADLLETMFRQRHTGYPVIDDGE-LVGMITLDDARSVRQ 306

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +  +V +VM  + K I  D+    A++ ++QHNI  L V+D      GI+   DL+ 
Sbjct: 307 VERDAYTVREVMSTDVKTIPADSDAMDALETIQQHNIGRLPVIDADGNVTGIISRTDLMT 366

Query: 338 -FGII 341
            F II
Sbjct: 367 AFNII 371


>gi|310287867|ref|YP_003939125.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           S17]
 gi|309251803|gb|ADO53551.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           S17]
          Length = 506

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 85/199 (42%), Gaps = 23/199 (11%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP E +  P  +  TT    ++ +      A +++   SE    +   GG +G L
Sbjct: 19  DDVLLLPNETDVIPSEVDTTTHLTREITMKVPAISAAMDTVTESEMAIAMARNGG-IGVL 77

Query: 217 FVCAS--------DVMHSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
               S        DV+   +S     PL V     L D   +  +     + VVDE  +L
Sbjct: 78  HRNLSIDDQAAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHISGLPVVDEENRL 137

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLM 318
            GIIT  D+     +D + L V+DVM K      P  I +D     A +LL QH +  L 
Sbjct: 138 VGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDD----AHRLLAQHKVEKLP 193

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           ++DD  K  G++   D ++
Sbjct: 194 LIDDNGKLAGLITVKDFVK 212


>gi|224475717|ref|YP_002633323.1| putative sugar phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420324|emb|CAL27138.1| putative sugar phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 181

 Score = 43.9 bits (102), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 66/153 (43%), Gaps = 12/153 (7%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   V   K I       G G+SG++ +  A  L   G  S  +  A         I +
Sbjct: 27  QFENEVRDAKNI----FTAGKGRSGYVANSFAMRLNQLGKASHVIGGATTPS-----IHK 77

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            DL IV+S SGS++ L+ +   A+     ++ IT++  S +   AD V+ LP   +    
Sbjct: 78  GDLFIVISGSGSTEHLRLLADKAKGEDAKVVLITTKPDSKIGEIADTVIELPAGTKYDAE 137

Query: 172 G-LAPTTSAIMQLA--IGDALAIALLESRNFSE 201
           G   P  S   Q A    DA+ + L+E  N  E
Sbjct: 138 GSEQPLGSLFEQSAQIFLDAVVLDLMEIFNIDE 170


>gi|303327984|ref|ZP_07358423.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
 gi|302861810|gb|EFL84745.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
          Length = 485

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A+ ++S+ R   + VVD G++L GI+T  D+   F +D   + V DVM  +  + +   
Sbjct: 108 EALDLMSDFRVSGLPVVD-GERLVGILTNRDV--RFVEDAQAVRVADVMTSDKLITVPMG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A + L +H I  L+VVD+ ++  G++   D+
Sbjct: 165 TSLAEAKRHLHEHRIEKLLVVDENKRLRGLITMKDI 200



 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 6/69 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI----- 272
           V  +DVM S D +  V +G  L +A   L E R   + VVDE ++L+G+IT  DI     
Sbjct: 147 VRVADVMTS-DKLITVPMGTSLAEAKRHLHEHRIEKLLVVDENKRLRGLITMKDIDKVQK 205

Query: 273 FRNFHKDLN 281
           + N  KD N
Sbjct: 206 YPNACKDAN 214


>gi|270264777|ref|ZP_06193042.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
 gi|270041460|gb|EFA14559.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 17/171 (9%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ EK+  S+L ++L      + H A++ ++  + R+++ GIG SG +    +  L   G
Sbjct: 102 LLVEKQ--SALRATLDINSEERLHQALDMLRQAR-RIILVGIGASGLVAKDFSYKLLKIG 158

Query: 91  T-----PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
                 P   V  A     D     + DL++ +S+SG   E+      AR     ++A+T
Sbjct: 159 VMAIAEPDMHVQLAAVQALD-----KRDLLLAISFSGERREINLAAEEARLAGAKVLALT 213

Query: 146 SENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           S + + +   AD  L T+ +EP +    ++ +T+   Q A+ D L +AL++
Sbjct: 214 SFSPNGLQQRADHCLYTIAEEPNTRSAAISSSTA---QFALTDLLFMALIQ 261


>gi|197104881|ref|YP_002130258.1| inosine-5'-monophosphate dehydrogenase [Phenylobacterium zucineum
           HLK1]
 gi|196478301|gb|ACG77829.1| inosine-5'-monophosphate dehydrogenase [Phenylobacterium zucineum
           HLK1]
          Length = 486

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 18/99 (18%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I + KR     VVDE  KL GI+T        ++D+   S +D+  K   ++  + L+TV
Sbjct: 110 IKARKRISGFPVVDEAGKLCGILT--------NRDMRFESRDDIPAK--ALMTRENLVTV 159

Query: 305 --------AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   A  LLR+H I  L+VVDD   A+G++   D+
Sbjct: 160 KEGVSQAEARDLLRRHKIERLIVVDDEYHAVGLITVKDM 198


>gi|170740037|ref|YP_001768692.1| signal-transduction protein [Methylobacterium sp. 4-46]
 gi|168194311|gb|ACA16258.1| putative signal-transduction protein with CBS domains
           [Methylobacterium sp. 4-46]
          Length = 131

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G +AV+DEG +L GII+E DI R     H+D     V +VM + P  I     L  A +
Sbjct: 36  VGALAVLDEG-RLIGIISERDIARRVIAGHRDPMLTLVREVMTREPLTIAAQAPLAEAHR 94

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+ +  I  L V+ D +  +G++   D+
Sbjct: 95  LMAERGIRHLPVMRD-EAVVGMISLRDI 121


>gi|46123863|ref|XP_386485.1| hypothetical protein FG06309.1 [Gibberella zeae PH-1]
          Length = 680

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR--NFHKDLNTLSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ FR        + +++ ++M
Sbjct: 108 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAVTIAEIM 167

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   G++
Sbjct: 168 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL 208


>gi|303244925|ref|ZP_07331250.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484690|gb|EFL47629.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 145

 Score = 43.9 bits (102), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 14/127 (11%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A DV+++     +VK       A   L + +  C+ VVD+ +K+ GIIT  DI  N  
Sbjct: 18  IMAKDVIYTHPDTGVVK-------AFETLLKYKISCLPVVDKDKKVIGIITTTDIGYNLI 70

Query: 278 KDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIV 330
            D  TL   V DVM K+   I  +  +  A++ + ++      I+ L VVD+  K IG+V
Sbjct: 71  LDEYTLDTKVSDVMTKDVITITSNKSIIEAIRRMDEYGHKGEIINQLPVVDENNKLIGVV 130

Query: 331 HFLDLLR 337
              D++R
Sbjct: 131 SDGDIIR 137


>gi|293384063|ref|ZP_06629957.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|293386877|ref|ZP_06631447.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|312907986|ref|ZP_07766969.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|312978486|ref|ZP_07790224.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
 gi|291078543|gb|EFE15907.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|291083711|gb|EFE20674.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|310626077|gb|EFQ09360.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|311288635|gb|EFQ67191.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
          Length = 197

 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+IK     + + G G+SG      A+ L   G     V    + H   G     DL+I
Sbjct: 41  VEQIKQAN-HIFLNGAGRSGIAIRAFANRLMHIGFSVSIVGEISSPHSKPG-----DLLI 94

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP----KEPESCPHG 172
           + S SG +  LK++   A++  I L  +T + +S +   AD+VL LP    +E +     
Sbjct: 95  ICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLADVVLVLPGTTKEENDRETAS 154

Query: 173 LA-PTTSAIMQLA 184
            A P  SA  QLA
Sbjct: 155 FAQPMGSAFEQLA 167


>gi|295700112|ref|YP_003608005.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
 gi|295439325|gb|ADG18494.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
          Length = 388

 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-- 330
            + F +  + L  EDVM ++   +   T    A +L R+HN+  L VVD  QK +GIV  
Sbjct: 230 LQAFSRSFDELRCEDVMSRHVVSVSPGTRAAAAWELFRRHNVKALPVVDVKQKLLGIVTR 289

Query: 331 -HFLDLLRFGII 341
             F+D   FG +
Sbjct: 290 ADFVDRKSFGAL 301


>gi|126657310|ref|ZP_01728469.1| polyA polymerase [Cyanothece sp. CCY0110]
 gi|126621297|gb|EAZ92009.1| polyA polymerase [Cyanothece sp. CCY0110]
          Length = 905

 Score = 43.9 bits (102), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE   L G+I+  D+    H   +   V+  M KN K I  DTLL     
Sbjct: 347 RYGHSGLSVVDENDHLVGVISRRDLDLALHHGFSHAPVKGYMSKNLKTIDPDTLLPDIES 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +++  L V+D+  K +GIV   DLLR
Sbjct: 407 IMVTYDVGRLPVIDN-NKLLGIVTRTDLLR 435


>gi|159906025|ref|YP_001549687.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159887518|gb|ABX02455.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 413

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 15/159 (9%)

Query: 190 AIALLESRNF------SENDFYVLHPGGKL--GTLFVCASDVMHSGDSIPL-VKIGCPLI 240
           A+ ++E+R F       ++D Y++     L   ++     D+M      P  V++   +I
Sbjct: 25  AVGIMENRKFHNLIIEKDDDIYLVTMHDLLLGNSVHQQVEDLMFK----PFCVRMNTQVI 80

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           DA   +         V+DE  +L GIIT+ D+ R   +   L  + ++ +M K+P  I  
Sbjct: 81  DAAFEMINSGQRVAPVIDENDELIGIITDYDVMRCAGQSELLKDVKIDKIMTKSPVTIDI 140

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +  A  L+ ++NI  L+V+D   K IG+V   D+++
Sbjct: 141 DESIGKARSLMMKYNIGRLIVLDTNGKPIGMVTEDDIVK 179


>gi|144900074|emb|CAM76938.1| Inosine-5'-monophosphate dehydrogenase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 486

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 52/193 (26%), Positives = 90/193 (46%), Gaps = 17/193 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG----- 211
           D VL +P   +  P+G+   T     + +G  L  A +++   S     +   GG     
Sbjct: 10  DDVLLVPAASDVMPNGVDTRTRITRSIELGIPLISAAMDTVTESRLAIALAQAGGIGVIH 69

Query: 212 KLGTLFVCASDV-----MHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEG-QKL 263
           K   +   A++V       SG  +  V I    PL +A+ ++++ +   + VV+ G +KL
Sbjct: 70  KNLDILAQAAEVRMVKKFESGMVVNPVTIHPDQPLAEALRLMADFKISGIPVVERGTRKL 129

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVDD 322
            GIIT  D+   F  D++   V ++M K+  V + + +    A +LL QH I  L+VVD 
Sbjct: 130 VGIITNRDV--RFASDVHQ-PVAELMTKDKLVTVREGVDKEEAKRLLHQHRIEKLLVVDG 186

Query: 323 CQKAIGIVHFLDL 335
             +  G+V   D+
Sbjct: 187 EYRCTGLVTVKDI 199


>gi|15899907|ref|NP_344512.1| hypothetical protein SSO3205 [Sulfolobus solfataricus P2]
 gi|284175182|ref|ZP_06389151.1| hypothetical protein Ssol98_11120 [Sulfolobus solfataricus 98/2]
 gi|13816643|gb|AAK43302.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601584|gb|ACX91187.1| CBS domain containing membrane protein [Sulfolobus solfataricus
           98/2]
          Length = 277

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDT 300
           AI I+  + FG + VVD   K  GI+TE + F   +KDL+ +  V+  M    + I ++ 
Sbjct: 96  AINIMVTRNFGSLPVVDINDKPVGIVTERE-FLLLYKDLDEIFPVKVFMSTKVQTIYKEV 154

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A++L+ +     L V+DD  K +GIV  ++ ++
Sbjct: 155 RLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIK 191


>gi|89097680|ref|ZP_01170568.1| transcriptional regulator (RpiR family) protein [Bacillus sp. NRRL
           B-14911]
 gi|89087539|gb|EAR66652.1| transcriptional regulator (RpiR family) protein [Bacillus sp. NRRL
           B-14911]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 11/167 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  +++LE +L+      F  AVE I   + +V   G G SG I          TG    
Sbjct: 103 RSNINTLEDTLKLIRGGAFEMAVEAILQAE-KVEFFGSGGSGIIAQDAYHKFIRTG---L 158

Query: 95  FVHAAEASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            VHA   SH  L     ++  D  + +S SG++ ++  +L  A+      I+IT+  K+ 
Sbjct: 159 TVHANSDSHLQLMSASQLSDKDTAVFISHSGATKDMIGVLKVAKENGARTISITNFAKTP 218

Query: 152 VACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +   ADI L T+ +E +     L   +S I QL+I DAL + ++ +R
Sbjct: 219 LTQQADIALYTVAEETDYRSEAL---SSRIAQLSIIDALYVNVMIAR 262


>gi|116511979|ref|YP_809195.1| transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
 gi|116107633|gb|ABJ72773.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 283

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 2/136 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + GIG S  +   +    +  G   FF+  A      L +  R  + I +S  G + E
Sbjct: 133 IFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSISDRKTIFIGISMKGETKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  +    +   IP+IAITS  +S +   +D +L      E      A T S + QL + 
Sbjct: 193 VIELARVVKGMKIPIIAITSREESTLGQMSDYILH-SVSGEDYQMRTAATMSLMAQLYVV 251

Query: 187 DALAIALLESRNFSEN 202
           D L   +  S +F+E+
Sbjct: 252 DIL-FYMFVSEHFTES 266


>gi|260891957|ref|YP_003238054.1| CBS domain containing protein [Ammonifex degensii KC4]
 gi|260864098|gb|ACX51204.1| CBS domain containing protein [Ammonifex degensii KC4]
          Length = 210

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 14/112 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLS 284
            P+  A+ I+++ +   + VV +G KL GI+TE  + R              +  L  L+
Sbjct: 18  TPIFQALEIINKHKIRHLPVVQDG-KLIGIVTERGLLRISPSPASTLSVYELNYILAKLT 76

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M+KNP     DT +  A  ++R+H I  L V++  Q  +GI+   D++
Sbjct: 77  VAEAMVKNPITTTPDTPIEEAALVMREHKIGCLPVLEKGQ-LVGIITQTDMV 127


>gi|15922703|ref|NP_378372.1| hypothetical protein ST2371 [Sulfolobus tokodaii str. 7]
 gi|15623493|dbj|BAB67481.1| 131aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 131

 Score = 43.9 bits (102), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +A  I+ ++  G + +VD+  K  GI+TE D+      ++     V ++M +NP  I E+
Sbjct: 22  EAAKIMKKEEVGSLVIVDKDYKAIGIVTERDLLYAIADEIPLDKPVSEIMSQNPVTIEEN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ A+ L+    I  L+VVD   K  G++   D+ R
Sbjct: 82  SDISEAVALMTSREIRHLIVVDHDGKVKGVISIRDVAR 119


>gi|241760303|ref|ZP_04758398.1| HTH-type transcriptional regulator HexR [Neisseria flavescens
           SK114]
 gi|241319181|gb|EER55659.1| HTH-type transcriptional regulator HexR [Neisseria flavescens
           SK114]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIAILMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        ++T  D+++ +S +GSS EL      A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLTEQDVLVAISNTGSSIELLDAASIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 AAVIALT-RNDSPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|261379777|ref|ZP_05984350.1| transcriptional regulator HexR [Neisseria subflava NJ9703]
 gi|284797457|gb|EFC52804.1| transcriptional regulator HexR [Neisseria subflava NJ9703]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIAILMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        ++T  D+++ +S +GSS EL      A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLTEQDVLVAISNTGSSIELLDAASIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 AAVIALT-RNDSPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
 gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
          Length = 218

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------ 284
            P+ +A+  + + +     VVD+  KL GI+T+ D+      +  TLS            
Sbjct: 18  VPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLMNASPSEATTLSVWEINYLLSRIT 77

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE VM + P  + EDT +  A +++  + I  L V+ D  + +GI+   DL + 
Sbjct: 78  VERVMTREPITVTEDTTVEEAARIMADNKIGGLPVLRD-NRLVGIITETDLFKI 130


>gi|260774487|ref|ZP_05883401.1| transcriptional regulator RpiR family [Vibrio metschnikovii CIP
           69.14]
 gi|260610614|gb|EEX35819.1| transcriptional regulator RpiR family [Vibrio metschnikovii CIP
           69.14]
          Length = 282

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 48/153 (31%), Positives = 70/153 (45%), Gaps = 11/153 (7%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG---M 108
           QFH AV  I     RV I GIG S   G  LA  L   G  +    A + SH  +     
Sbjct: 121 QFHHAVNWINQ-AHRVQIVGIGGSALTGKDLAFKLLKLGITAL---AEQDSHVQIATART 176

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPE 167
           +   D+ I +S+SG   E+      A++    +IA+T+  KS +   ADI L T+  E +
Sbjct: 177 LRPQDVQIAISFSGDRKEVFIAAEAAKQQGAKVIALTAPKKSKLRQLADIALDTIADETQ 236

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
                +A  T+   Q  + D L I+L++ R  S
Sbjct: 237 HRSSSIASRTA---QNVLTDLLFISLVQQREDS 266


>gi|20094343|ref|NP_614190.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887402|gb|AAM02120.1| prdicted regulatory protein consisting of a uncharacterized
           conserved domain fused to a CBS domain [Methanopyrus
           kandleri AV19]
          Length = 501

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 8/98 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           D    L EK    + VVDE  ++ GI+T  DI        + L  +  EDV+   P   +
Sbjct: 401 DVARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAAVAEGKRRLKDIMTEDVITIRPHESV 460

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++     A++ + +HNIS L VVD   + +GIV   D+
Sbjct: 461 DE-----ALRRMDRHNISCLPVVDGENRVVGIVTRTDI 493


>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 173

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTL--SVEDVMIKNPKV 295
           L DA+ +L + R G +  VDE  KL GI++E DI R    +   TL   VE+VM +  + 
Sbjct: 54  LHDAVVLLRDNRIGALLCVDEEGKLAGILSERDIVRKLADQPGKTLPHRVEEVMTRTVET 113

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              D  L V ++L+ +     + VV D    IG++   D++ F
Sbjct: 114 CTADEPLVVVLRLMTEGRFRHMPVV-DGDALIGMITIGDVVHF 155


>gi|149372552|ref|ZP_01891664.1| putative inosine-5'-monophosphate dehydrogenase [unidentified
           eubacterium SCB49]
 gi|149354595|gb|EDM43159.1| putative inosine-5'-monophosphate dehydrogenase [unidentified
           eubacterium SCB49]
          Length = 490

 Score = 43.9 bits (102), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 49/172 (28%), Positives = 78/172 (45%), Gaps = 19/172 (11%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV-----MHSG-- 227
           P  SA M      A+AIA+       E    VLH   K  T+   A++V       SG  
Sbjct: 47  PIVSAAMDTVTESAMAIAMAR-----EGGIGVLH---KNMTIEQQAAEVRKVKRAESGMI 98

Query: 228 -DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            D + L K    + DA + + E   G + ++D+   L GI+T  D+   F K+ +    E
Sbjct: 99  QDPVTLHKENT-VGDAQSTMREYSIGGIPIIDKDGLLVGIVTNRDL--RFEKNYSRKLSE 155

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++N       T L  A  +L+++ I  L VVDD  K +G++ F D+ + 
Sbjct: 156 IMTVENLVTTAHGTSLKEAELILQENKIEKLPVVDDSGKLLGLITFRDITKL 207


>gi|269986159|gb|EEZ92472.1| CBS domain containing membrane protein [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 361

 Score = 43.9 bits (102), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 61/121 (50%), Gaps = 5/121 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           A+D M      P V     +   I+I+ +   G + VVDE +K+ GII++ D+ +    D
Sbjct: 63  AADFMKKA---PAVLAKDSISKTISIMQDSGVGALPVVDEDKKVIGIISDFDVLKLLIND 119

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++  VEDV+I+   ++  D  +  A +L   + I  L +VD+  K +G +   D+L 
Sbjct: 120 RIFDSFKVEDVVIRRFPILRTDDTIGRAQKLAAINRIDNLPIVDNFGKLLGQISTSDILS 179

Query: 338 F 338
           +
Sbjct: 180 Y 180



 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDT 300
           A+ I+  K+   + VV + +K  G+I   D+     +D+N  L   D M K P V+ +D+
Sbjct: 23  ALEIMDSKKIKELPVV-QNKKYAGLILYYDLL---SRDINKNLKAADFMKKAPAVLAKDS 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +  + +++   +  L VVD+ +K IGI+   D+L+  I
Sbjct: 79  I-SKTISIMQDSGVGALPVVDEDKKVIGIISDFDVLKLLI 117


>gi|319637731|ref|ZP_07992497.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria mucosa
           C102]
 gi|317400886|gb|EFV81541.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria mucosa
           C102]
          Length = 282

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 80/175 (45%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIAILMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        ++T  D+++ +S +GSS EL      A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLTEQDVLVAISNTGSSIELLDAASIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASVIALT-RNDSPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|313903533|ref|ZP_07836923.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466086|gb|EFR61610.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 509

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           DA+ +++      V +VD    L GIIT  D+   F +DL   S+ +VM +   V   E 
Sbjct: 131 DALELMARYHISGVPIVDGHGILVGIITNRDV--RFEEDLER-SIAEVMTREGLVTAPEG 187

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A +++RQH I  L +VD   +  G++   D+
Sbjct: 188 TTLARAREIMRQHKIEKLPLVDGAGRLRGLITIKDI 223


>gi|303244451|ref|ZP_07330786.1| protein of unknown function DUF39 [Methanothermococcus okinawensis
           IH1]
 gi|302485149|gb|EFL48078.1| protein of unknown function DUF39 [Methanothermococcus okinawensis
           IH1]
          Length = 512

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 227 GDSI--PLVKIGCPLI--DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           GD I  P + + C +   +A  IL E     + +VDE   L GI+T  DI R   +  N 
Sbjct: 392 GDIIRKPPIVVNCNITIDEASKILIENNINHLPIVDENNMLIGILTSWDIARAVAQ--NK 449

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            S+ ++M +N      D  + V  + + ++NIS + VVD   + +G+V   DL + 
Sbjct: 450 KSISEIMTRNIISSTVDEPIDVVARKMSRNNISGVPVVDKNGRVLGVVTAEDLSKL 505


>gi|255526449|ref|ZP_05393360.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|296184823|ref|ZP_06853234.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|255509831|gb|EET86160.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|296050605|gb|EFG90028.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
          Length = 484

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA++++S+ R   V +   G KL GIIT  DI    ++ + ++ +  ++ +I  P    E
Sbjct: 108 DALSLMSKYRISGVPITVAG-KLVGIITNRDIVFETDYSRKISEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DT +  A +LL+ H I  L +VD     IG++   D+
Sbjct: 163 DTTIEQAKELLKNHRIEKLPLVDKDNNLIGLITIKDI 199


>gi|187776787|ref|ZP_02993260.1| hypothetical protein CLOSPO_00303 [Clostridium sporogenes ATCC
           15579]
 gi|187775446|gb|EDU39248.1| hypothetical protein CLOSPO_00303 [Clostridium sporogenes ATCC
           15579]
          Length = 484

 Score = 43.5 bits (101), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  +G+KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPIT-KGEKLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIEEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|296332950|ref|ZP_06875408.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672707|ref|YP_003864378.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149914|gb|EFG90805.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305410950|gb|ADM36068.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 488

 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 ASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|291300244|ref|YP_003511522.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569464|gb|ADD42429.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 304

 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 4/119 (3%)

Query: 47  GELSFQFH-CAVEKIK---AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
            + +FQ    A+++I    A   RV + G+G SG    ++A  L     P +F   A  +
Sbjct: 120 ADTAFQVDTAAIDRIATAIAAASRVELCGMGSSGTAAREMAFRLERIRVPCWFRPDAHTA 179

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
             +  ++T  D+ I +S SG + E+  +L  A       +A+TS  +S +A  AD+VL+
Sbjct: 180 LTNAALLTESDVAIGISHSGRTREIVEVLAEAGSHGALTVAVTSFRRSPLADTADVVLS 238


>gi|37677064|ref|NP_937460.1| signal-transduction protein [Vibrio vulnificus YJ016]
 gi|37201609|dbj|BAC97430.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
          Length = 621

 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 226 SGDSIPLVKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
           + ++I +VK+   + D AIT+  ++R  C  V+D G  + G++T+ D+  +     KD++
Sbjct: 162 ASENIAIVKVTDSIRDVAITMCGKQRSSCAVVMD-GNDIVGLVTDRDMTASVVAKEKDVS 220

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              +E VM  NP +I  D  +  A+ L+ Q+NI  L VV+
Sbjct: 221 E-RIESVMKLNPVLIESDAKVIQAISLMLQYNIRCLPVVN 259


>gi|332796580|ref|YP_004458080.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332694315|gb|AEE93782.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 276

 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVIL 297
           +++AITI+  + FG + VVD+  +  GI+TE ++  +F  DL  L  V   M K    I 
Sbjct: 93  ILEAITIMVTRNFGSLPVVDDLGRPTGIVTEREMLLSFQ-DLEVLFPVSMFMSKKVTTIN 151

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  L  A + +       L VVD+  K IGIV   D ++
Sbjct: 152 KDVDLVQATRQMLHRGFRRLPVVDEEGKVIGIVTAADCIK 191



 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--------VEDVMI 290
           L+ A   +  + F  + VVDE  K+ GI+T  D  +   K +  L         V D+M 
Sbjct: 156 LVQATRQMLHRGFRRLPVVDEEGKVIGIVTAADCIKAASKSVEKLDPDYFFSKKVTDIMS 215

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             P  I ED  +  A   L + NI  L+++DD  +  GI+   DLL
Sbjct: 216 TPPISIEEDRSINEAAATLIEKNIGSLLILDDESRPKGIITERDLL 261


>gi|320449566|ref|YP_004201662.1| inosine-5'-monophosphate dehydrogenase [Thermus scotoductus SA-01]
 gi|320149735|gb|ADW21113.1| inosine-5'-monophosphate dehydrogenase [Thermus scotoductus SA-01]
          Length = 494

 Score = 43.5 bits (101), Expect = 0.042,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  ++ E R G + VVD   KL G++T  D+   F ++L    V +VM    ++I  
Sbjct: 108 LEDAERLMREYRIGGLPVVDLYGKLLGLVTNRDL--RFERNLKR-PVTEVMTPLERLITA 164

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++LR+H +  L +VD+  +  G++   D+++
Sbjct: 165 PPGTTLEEAEEILRKHKVEKLPLVDEAGRLKGLLTLKDIVK 205


>gi|193214909|ref|YP_001996108.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088386|gb|ACF13661.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
           ATCC 35110]
          Length = 495

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 55/103 (53%), Gaps = 9/103 (8%)

Query: 241 DAITILSEKRFGCVAVVDE----GQK-LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           DA+ +++      + VVD+    GQK LKGIIT  D+   F  D N L V ++M K   +
Sbjct: 108 DALDLMARFSISGIPVVDDKSVPGQKKLKGIITNRDL--RFKPDENQL-VSNIMTKTDLI 164

Query: 296 ILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                T L  A ++L+ H I  L++VDD     G++ F D+L+
Sbjct: 165 TAAVGTDLDKAEEILQHHKIEKLLIVDDEGFLKGLITFKDILK 207


>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 138

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVI 296
           ++D    + E  +G   V+ E  KL GI+TE D+     +      L   DVM ++P  +
Sbjct: 28  VVDVAKKMLEHGYGSALVI-EDDKLIGIVTERDLLYALSEGEEGVKLKASDVMTEDPISV 86

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              T +  A+++++  N+  L VVDD  + +G+V F D+
Sbjct: 87  KAKTDIMEAIKIMKDANVRHLPVVDDKGRPVGVVAFRDI 125


>gi|149204515|ref|ZP_01881481.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
 gi|149142014|gb|EDM30063.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
          Length = 231

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 64/143 (44%), Gaps = 27/143 (18%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+M +  S+  V +   + DA+ ++ +     + VVD    LKG+++EGD+ R   
Sbjct: 1   MLAKDIMTT--SVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVR 58

Query: 278 K------------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +                         L +  VEDVM ++   + EDT +    +LL +H 
Sbjct: 59  ETDGPRRSWWLEVLGGASESAQDFVKLKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHR 118

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I  + VV    K +GIV   +LL
Sbjct: 119 IKRVPVV-RSDKVVGIVSRANLL 140


>gi|251771729|gb|EES52304.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Leptospirillum ferrodiazotrophum]
          Length = 616

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 65/147 (44%), Gaps = 9/147 (6%)

Query: 28  LRSIIAEKRGLSSLE----SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGS 80
           L+ I  + R L+ L     SS    LS      VE + A   R+ I G G S H   +G 
Sbjct: 255 LKEICEQPRVLAELLAGKISSGPAGLSLHLPPKVEAVLARARRLRIVGCGTSYHAGLLGK 314

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                LA  G P     A+E  + +  +    DL++ L+ SG + +  A L  AR   +P
Sbjct: 315 YRIEDLA--GRPVEVEIASEFRYREPLLDPASDLLVALTQSGETADTLAALRMAREAGVP 372

Query: 141 LIAITSENKSVVACHADIVLTLPKEPE 167
            +A+ +   S +A  AD VL L   PE
Sbjct: 373 TLALVNVPGSTIAREADAVLFLEAGPE 399


>gi|296109848|ref|YP_003616797.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus infernus
           ME]
 gi|295434662|gb|ADG13833.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus infernus
           ME]
          Length = 490

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A+ ++       + V+D  +K+ GIIT  DI     KD   + V++VM KN     ED 
Sbjct: 111 EAMELMENYSVSGLPVIDRDEKVVGIITHRDI--KAIKD-KGVKVKEVMTKNVVTAKEDI 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               A++++  + +  L +VDD  K IGIV   D+L+
Sbjct: 168 SEDEALEIMYSNRVERLPIVDDEGKLIGIVTLRDILK 204


>gi|261377732|ref|ZP_05982305.1| transcriptional regulator HexR [Neisseria cinerea ATCC 14685]
 gi|269146015|gb|EEZ72433.1| transcriptional regulator HexR [Neisseria cinerea ATCC 14685]
          Length = 315

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 83/175 (47%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++ +D++I +S +GSS EL   +  A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLSSEDVLIAISNTGSSIELLDAVSIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N+S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASIIALT-RNESPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|168213735|ref|ZP_02639360.1| CBS domain protein [Clostridium perfringens CPE str. F4969]
 gi|182624019|ref|ZP_02951807.1| CBS domain protein [Clostridium perfringens D str. JGS1721]
 gi|170714822|gb|EDT27004.1| CBS domain protein [Clostridium perfringens CPE str. F4969]
 gi|177910912|gb|EDT73266.1| CBS domain protein [Clostridium perfringens D str. JGS1721]
          Length = 206

 Score = 43.5 bits (101), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +M   +++ LV     L DA+ I+ + +F  + VVD G K +G + +  I++ + K+   
Sbjct: 6   IMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVD-GDKFRGAVAKSSIYKYYFKNNLS 64

Query: 280 ----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               LN ++V +++     +I +   +  A+ +L +  IS + VVD+     GI+
Sbjct: 65  KDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGIL 119



 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +P++     +  A+++L   R   VAVVDE    KGI+T   +FR F+
Sbjct: 81  EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFN 129


>gi|298675708|ref|YP_003727458.1| peptidase M50 [Methanohalobium evestigatum Z-7303]
 gi|298288696|gb|ADI74662.1| peptidase M50 [Methanohalobium evestigatum Z-7303]
          Length = 365

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 1/81 (1%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V EG  LKG+++  D+ +   ++ + + V D+M K+      DT  + A +L+ ++N+  
Sbjct: 276 VMEGNNLKGVVSFTDVRKVMPEERSAMRVSDIMTKDIISTTSDTNASEAFKLISRNNVGR 335

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L+V+D+ +   GIV   DL+R
Sbjct: 336 LLVIDNGELK-GIVSRTDLIR 355


>gi|30022375|ref|NP_834006.1| CBS domain-containing protein [Bacillus cereus ATCC 14579]
 gi|206971363|ref|ZP_03232314.1| CBS domain protein [Bacillus cereus AH1134]
 gi|218233320|ref|YP_002369104.1| CBS domain protein [Bacillus cereus B4264]
 gi|218899463|ref|YP_002447874.1| CBS domain protein [Bacillus cereus G9842]
 gi|228902820|ref|ZP_04066965.1| transcriptional regulator [Bacillus thuringiensis IBL 4222]
 gi|228910131|ref|ZP_04073951.1| transcriptional regulator [Bacillus thuringiensis IBL 200]
 gi|228923049|ref|ZP_04086342.1| transcriptional regulator [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228941462|ref|ZP_04104013.1| transcriptional regulator [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228954581|ref|ZP_04116606.1| transcriptional regulator [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960562|ref|ZP_04122211.1| transcriptional regulator [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228967362|ref|ZP_04128397.1| transcriptional regulator [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228974393|ref|ZP_04134962.1| transcriptional regulator [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980986|ref|ZP_04141289.1| transcriptional regulator [Bacillus thuringiensis Bt407]
 gi|229048016|ref|ZP_04193592.1| transcriptional regulator [Bacillus cereus AH676]
 gi|229071800|ref|ZP_04205015.1| transcriptional regulator [Bacillus cereus F65185]
 gi|229081557|ref|ZP_04214055.1| transcriptional regulator [Bacillus cereus Rock4-2]
 gi|229111770|ref|ZP_04241318.1| transcriptional regulator [Bacillus cereus Rock1-15]
 gi|229129574|ref|ZP_04258544.1| transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|229146882|ref|ZP_04275247.1| transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|229152497|ref|ZP_04280689.1| transcriptional regulator [Bacillus cereus m1550]
 gi|229180574|ref|ZP_04307916.1| transcriptional regulator [Bacillus cereus 172560W]
 gi|229192506|ref|ZP_04319469.1| transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|29897933|gb|AAP11207.1| CBS domain containing protein [Bacillus cereus ATCC 14579]
 gi|206734135|gb|EDZ51306.1| CBS domain protein [Bacillus cereus AH1134]
 gi|218161277|gb|ACK61269.1| CBS domain protein [Bacillus cereus B4264]
 gi|218542065|gb|ACK94459.1| CBS domain protein [Bacillus cereus G9842]
 gi|228591083|gb|EEK48939.1| transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|228602998|gb|EEK60477.1| transcriptional regulator [Bacillus cereus 172560W]
 gi|228631105|gb|EEK87742.1| transcriptional regulator [Bacillus cereus m1550]
 gi|228636710|gb|EEK93175.1| transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|228653891|gb|EEL09759.1| transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|228671764|gb|EEL27060.1| transcriptional regulator [Bacillus cereus Rock1-15]
 gi|228701762|gb|EEL54250.1| transcriptional regulator [Bacillus cereus Rock4-2]
 gi|228711395|gb|EEL63355.1| transcriptional regulator [Bacillus cereus F65185]
 gi|228723473|gb|EEL74842.1| transcriptional regulator [Bacillus cereus AH676]
 gi|228778777|gb|EEM27041.1| transcriptional regulator [Bacillus thuringiensis Bt407]
 gi|228785443|gb|EEM33453.1| transcriptional regulator [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792397|gb|EEM39964.1| transcriptional regulator [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228799162|gb|EEM46130.1| transcriptional regulator [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228805238|gb|EEM51832.1| transcriptional regulator [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228818243|gb|EEM64317.1| transcriptional regulator [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228836682|gb|EEM82030.1| transcriptional regulator [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228849648|gb|EEM94482.1| transcriptional regulator [Bacillus thuringiensis IBL 200]
 gi|228856829|gb|EEN01344.1| transcriptional regulator [Bacillus thuringiensis IBL 4222]
 gi|326942079|gb|AEA17975.1| CBS domain-containing protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 210

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|237653620|ref|YP_002889934.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237624867|gb|ACR01557.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 217

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 12/106 (11%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED----- 299
           I+  K+   V V+D+ +K+ GII+  D+ R     + TL V +V     K+   D     
Sbjct: 26  IMRLKKVRHVPVIDQDRKVLGIISHRDVQRAQPSMITTLDVGEVKYLLSKITAADIMHKS 85

Query: 300 -------TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  T +  A +++R   +  L+VVDD  + +GIV  +DLL F
Sbjct: 86  VVSCSPRTQIEEAARMMRPKKLGCLVVVDDAGRLVGIVTSVDLLDF 131


>gi|188996634|ref|YP_001930885.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931701|gb|ACD66331.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 140

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
           I++ +  G V VV++G+ + GI+T+ DI  R  +K +N   + V ++M K+P  + ED  
Sbjct: 26  IMASRNVGSVVVVEDGKPV-GILTDRDIVVRLVNKGINPSEVKVSELMTKDPICLQEDLG 84

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+++++Q  +    VVD   K  GIV   D++
Sbjct: 85  IFEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIV 119


>gi|258404196|ref|YP_003196938.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257796423|gb|ACV67360.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 140

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 55/106 (51%), Gaps = 13/106 (12%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VEDVMIK 291
           ++  E  F  + VVD G  L+G+I++ D+ +N           ++DL  L+     +M +
Sbjct: 25  SLFEEHEFHHLLVVDGGM-LQGVISDRDLLKNLSPFYDTPCEQNRDLAILNKRAHQIMSR 83

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP  +  +T +  A +LL +  IS L VV +  +  GIV + DL+R
Sbjct: 84  NPVTVTAETSVKDAFELLIEKRISCLPVVTESGRVAGIVTWKDLIR 129


>gi|241661650|ref|YP_002980010.1| CBS domain-containing membrane protein [Ralstonia pickettii 12D]
 gi|240863677|gb|ACS61338.1| CBS domain containing membrane protein [Ralstonia pickettii 12D]
          Length = 382

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 21/64 (32%), Positives = 34/64 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M      +   T +  A+QLLRQH    L VVD+ ++ +GIV  
Sbjct: 229 LQAYTRTFQALTCADIMTAPVVTVSAGTSIPRALQLLRQHGFKALPVVDEGRRVVGIVTR 288

Query: 333 LDLL 336
           +DLL
Sbjct: 289 VDLL 292


>gi|126458961|ref|YP_001055239.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248682|gb|ABO07773.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 145

 Score = 43.5 bits (101), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTL 301
           I++EK+ G V +VD+ Q     G+++E DI R   K +N       ++  P + +E D  
Sbjct: 26  IMAEKKIGLVVIVDKSQPDVAVGVVSERDIVRAVAKGVNLDGPVSAIMSTPVITVEGDEP 85

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    +++RQHNI   +VV    K  G++   DL+
Sbjct: 86  VWKVAEVMRQHNIR-HVVVTRGGKLYGVISIRDLV 119


>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
 gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 30/146 (20%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D M   + + + K    + +A+  L EKR     V+D+  KL G++++ D+         
Sbjct: 6   DFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLGSISGS 65

Query: 273 --------FRNFHKDLNTLS-------------VEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                   F N      T +             V D+M  NP V+ E T L  A++LL +
Sbjct: 66  SCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKVVGDLMTPNPLVVYETTNLEDAVRLLLE 125

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
                L VVD+  K +GI+   D++R
Sbjct: 126 TKYRRLPVVDNDGKLVGIITRGDIVR 151


>gi|171186288|ref|YP_001795207.1| CBS domain-containing protein [Thermoproteus neutrophilus V24Sta]
 gi|170935500|gb|ACB40761.1| CBS domain containing protein [Thermoproteus neutrophilus V24Sta]
          Length = 688

 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 9/120 (7%)

Query: 224 MHSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--H 277
           + +GD++    I  P    L D + I++EK  G V VV++G +L G I+E D  +    +
Sbjct: 569 VSAGDAVARDPITVPPSATLRDVLKIMAEKNIGFVPVVEDG-RLVGGISESDFVQILLNN 627

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L+T  VE VM      I     +  A +L+ +HNI  L VV+D  K +G++   DLL+
Sbjct: 628 TPLDT-PVEKVMRCQLITIERTRPVKEAAELMVKHNIRHLPVVEDG-KVVGVLSVRDLLK 685


>gi|166365960|ref|YP_001658233.1| hypothetical protein MAE_32190 [Microcystis aeruginosa NIES-843]
 gi|166088333|dbj|BAG03041.1| hypothetical protein MAE_32190 [Microcystis aeruginosa NIES-843]
          Length = 898

 Score = 43.5 bits (101), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE  +L G+I+  D+    H   +   V+  M  NPK I  DT L     
Sbjct: 345 RYGHSGLSVVDEQDRLVGVISRRDLDLALHHGFSRSPVKGYMTCNPKTITPDTSLQEIES 404

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +++  L V+++ Q  +GIV   D+LR
Sbjct: 405 LMVTYDLGRLPVLENGQ-LVGIVTRTDVLR 433


>gi|302555281|ref|ZP_07307623.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
 gi|302472899|gb|EFL35992.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
          Length = 144

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-- 278
           DVM  G  +  V+    L++A  ++  +  G V VV EGQ + G++T+ DI  R      
Sbjct: 8   DVMTPG--VVAVRPDASLVEAALLMRTQNIGDV-VVAEGQDVIGVLTDRDITVRAVADGA 64

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T+SV+ V   +P  +  +  +T A+ L+R+H +  L VV++    +GIV   D+
Sbjct: 65  DPMTVSVQTVCTPDPVTVTPEDRVTTAVTLMREHAVRRLPVVENGLP-VGIVSLGDV 120


>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
 gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
          Length = 205

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 8/104 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           DA+  +++   G + VV  G++  + GIITE D  R      +   +  V D+M +  K+
Sbjct: 82  DAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I    DT +  AMQL+    I  + V+DD ++ IG+V   D++R
Sbjct: 142 ITVTPDTKVLKAMQLMTDKRIRHIPVIDD-KEMIGMVSIGDVVR 184


>gi|28379869|ref|NP_786761.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254558010|ref|YP_003064427.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|308182085|ref|YP_003926213.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28272710|emb|CAD65639.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254046937|gb|ACT63730.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|308047576|gb|ADO00120.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 273

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
            H AV  I   + RV + G+G SG+   ++   L   G  +F +      +   G++   
Sbjct: 111 LHAAVNLISKAR-RVYLYGLGSSGYTAQEMTQRLIRMGIAAFSMTDTHIMYISGGIMQPG 169

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           D+I+ +S +G++ E+   +  A++    +IAITS+ +S +A  +D+ +
Sbjct: 170 DIILAISLTGATAEVNDSVALAKKKQAKVIAITSDERSRLAELSDLTI 217


>gi|328880393|emb|CCA53632.1| hypothetical protein SVEN_0345 [Streptomyces venezuelae ATCC 10712]
          Length = 234

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G    +   +L E     V VVD+  +  G+++E D+ R  H   +  S  + M+ +
Sbjct: 17  VQPGTSFKEIARLLDEYGITAVPVVDDEHRPVGVVSEADLLRR-HTAKDGPSTAEAMMSS 75

Query: 293 PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P V    +   V A +L+ +H +  L VVD   + IG++   DLL+ 
Sbjct: 76  PVVTARPSWTAVEAARLMERHRVKRLPVVDADGRLIGVLSRSDLLQL 122


>gi|307594758|ref|YP_003901075.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307549959|gb|ADN50024.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 297

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 57/102 (55%), Gaps = 1/102 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            PL +A  + +E++   + V+D+  ++ G+IT  +I + +++    + VED   ++   I
Sbjct: 192 SPLKEAAKVFAERKIRALPVIDDEGRIVGLITTSEIAKAYYEGNLNVRVEDYARRDVPTI 251

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++  +  AM+L+  + I  L+VV    K +GI+   D+L++
Sbjct: 252 DKEADIYDAMRLMTVNKIGRLIVVSGG-KPVGIITRTDILQY 292


>gi|296108947|ref|YP_003615896.1| protein of unknown function DUF39 [Methanocaldococcus infernus ME]
 gi|295433761|gb|ADG12932.1| protein of unknown function DUF39 [Methanocaldococcus infernus ME]
          Length = 507

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 231 PLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           P+V K+G  + +A  IL       + +VDE  K+ GI+T  DI +   +      +E++M
Sbjct: 396 PIVAKLGISIEEAAKILMNNNINHLPIVDEHGKIVGIVTSWDIAKAVAE--KKRKIEEIM 453

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N     +D  +    + + +++IS L V+D+  + +G+V   DL R 
Sbjct: 454 TRNVVTARKDEPIDEVARKMCRYDISGLPVIDENNRVVGVVTSEDLSRL 502


>gi|188996703|ref|YP_001930954.1| diguanylate cyclase with PAS/PAC sensor [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931770|gb|ACD66400.1| diguanylate cyclase with PAS/PAC sensor [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 675

 Score = 43.5 bits (101), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 34/93 (36%), Positives = 52/93 (55%), Gaps = 5/93 (5%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP--KVILEDTLLTV 304
           +E R  C+ VVD+   L GIITE DI +   K +    + D+  K P   V   DTL  V
Sbjct: 10  AENRISCLPVVDDNN-LIGIITEKDIVKYISKGITEDKIGDLASK-PVITVSFNDTLDNV 67

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++L+++ NI  L+V+++  K  GI+   D+LR
Sbjct: 68  -LKLIKEKNIRHLVVLNENDKIAGILTQRDILR 99


>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
 gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
          Length = 220

 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLN 281
           K    ++ A  ++ E  +  + VVD+  +L GI+++ DI                +  L+
Sbjct: 15  KPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + + D+M K    +  D  +  A  LL +HN+  L VVDD  K +G++   D+ +
Sbjct: 75  EIKIGDIMTKTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDNKVVGVITDSDIFK 130


>gi|75761900|ref|ZP_00741825.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74490608|gb|EAO53899.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 211

 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 180

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 181 VVKDTKQGLEVI 192


>gi|146422866|ref|XP_001487367.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
 gi|146388488|gb|EDK36646.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
           6260]
          Length = 335

 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 14/116 (12%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RN--FHKDLNTLSVEDVM 289
           +  P+I+ I +L+ K    + +VDE  KL  +    D+    +N   + DL+ L+V D +
Sbjct: 216 MATPVIEVIHLLAHKSVSSIPIVDETGKLINVYEAIDVLALVKNGGMYTDLD-LTVGDAL 274

Query: 290 IKNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +K P+         + D L T+ M  +R+  +  L VVDD  K + +V   D+LR+
Sbjct: 275 LKRPEDFEGVHTCTVNDRLSTI-MDTIRKSRLHRLFVVDDEGKLVSVVSLSDILRY 329


>gi|118473395|ref|YP_884608.1| RpiR family transcriptional regulator protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118174682|gb|ABK75578.1| transcriptional regulator, RpiR family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 300

 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 3/137 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I+G+G S  +   L   L   G  +F      ++     ++   D+   +S SG +D
Sbjct: 142 RVDISGVGASAFVAQDLHQKLHRIGRIAFVWSDRHSAVTAAALLGPGDVAFAVSHSGETD 201

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IA+T+  +S +A  ADIVLT        P     T S I QLA+
Sbjct: 202 DVVEFLDAAAGCGATTIALTNSPRSALAEAADIVLTTCA--RETPFRSGATVSRIAQLAV 259

Query: 186 GDALAIALLESRNFSEN 202
            D L + + + R+F E 
Sbjct: 260 VDCLFVGVAQ-RSFGET 275


>gi|156743707|ref|YP_001433836.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235035|gb|ABU59818.1| CBS domain containing membrane protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 162

 Score = 43.5 bits (101), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 12/116 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKD-------L 280
           V +  P+ +A+ ++ E     + VV +  +L+GIIT+GDI      R    D       L
Sbjct: 31  VNLAAPVSEALALMREHNVRRLPVVIDTGELRGIITQGDIRGADLLRVAGMDPFEIADAL 90

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + V +VM ++P  +  +T L  A  L+  + I  L VVD+    +GI+   DL 
Sbjct: 91  RRIKVYEVMTEDPITVTPETSLREAAMLMIDNKIGGLPVVDEHNMVVGIITESDLF 146


>gi|18311145|ref|NP_563079.1| CBS domain protein [Clostridium perfringens str. 13]
 gi|110800434|ref|YP_696842.1| CBS domain-containing protein [Clostridium perfringens ATCC 13124]
 gi|168205601|ref|ZP_02631606.1| CBS domain protein [Clostridium perfringens E str. JGS1987]
 gi|168210093|ref|ZP_02635718.1| CBS domain protein [Clostridium perfringens B str. ATCC 3626]
 gi|168215791|ref|ZP_02641416.1| CBS domain protein [Clostridium perfringens NCTC 8239]
 gi|18145828|dbj|BAB81869.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110675081|gb|ABG84068.1| CBS domain protein [Clostridium perfringens ATCC 13124]
 gi|170662905|gb|EDT15588.1| CBS domain protein [Clostridium perfringens E str. JGS1987]
 gi|170711770|gb|EDT23952.1| CBS domain protein [Clostridium perfringens B str. ATCC 3626]
 gi|182382006|gb|EDT79485.1| CBS domain protein [Clostridium perfringens NCTC 8239]
          Length = 206

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFH 277
           +M   +++ LV     L DA+ I+ + +F  + VVD G K +G + +  I++     N  
Sbjct: 6   IMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVD-GDKFRGAVAKSSIYKYYFKHNLS 64

Query: 278 KD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           KD  LN ++V +++     +I +   +  A+ +L +  IS + VVD+     GI+
Sbjct: 65  KDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGIL 119



 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +P++     +  A+++L   R   VAVVDE    KGI+T   +FR F+
Sbjct: 81  EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKAVFREFN 129


>gi|260599128|ref|YP_003211699.1| hypothetical protein CTU_33360 [Cronobacter turicensis z3032]
 gi|260218305|emb|CBA33285.1| hypothetical protein CTU_33360 [Cronobacter turicensis z3032]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 38/145 (26%), Positives = 66/145 (45%), Gaps = 13/145 (8%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDDLIIVLSWS 121
           G V I G+  S  IG  L   L   G P+     +H A  +   LG     DL++ +S S
Sbjct: 132 GSVQIYGVAASAIIGEYLHYKLLRLGKPAHLFSDMHRASMNATTLG---ERDLVVAISSS 188

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           GS+ +L   +  AR+   P++ +++  +S +A  +D++L   K     P G  P  +  +
Sbjct: 189 GSTRDLLHAVKLARKAGAPVLTLSNTPRSPLASISDMLLVAAK-----PEG--PLNAGAL 241

Query: 182 QLAIGDALAIALLESRNFSENDFYV 206
              +G  L + LL +   + +  Y 
Sbjct: 242 NAKVGAMLLVELLTASLIASDSRYT 266


>gi|226365668|ref|YP_002783451.1| inosine 5'-monophosphate dehydrogenase [Rhodococcus opacus B4]
 gi|226244158|dbj|BAH54506.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus opacus B4]
          Length = 507

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V D   +L GIIT  D+   F  D N  +V +VM K P +  ++ +   VA+ L
Sbjct: 131 RISGLPVTDAAGQLVGIITNRDM--RFEVDQNR-AVSEVMTKAPLITAQEGVTAEVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGQGKLTGLITVKDFVK 216


>gi|159041176|ref|YP_001540428.1| signal transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920011|gb|ABW01438.1| putative signal transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 145

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 55/105 (52%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V    P+ +A  +++    G + V+  G ++ G+++E DI R     +N +  +E +  K
Sbjct: 16  VDAATPIKEAAKVMTRNNVGLLVVMSNG-RMTGVVSEKDIVRAVANGVNPSDPIEKITTK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +  ++ L  A +L+ + NI  L+VVDD    +G+V   D++
Sbjct: 75  SVISVNHESSLHEAAELMHKLNIRHLVVVDDNNNPVGVVSIRDIV 119


>gi|313113533|ref|ZP_07799122.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624260|gb|EFQ07626.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 611

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)

Query: 65  GRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           GRV + G G + H   +G     TLA    P+    A+E  + D  ++ ++DL+I++S S
Sbjct: 296 GRVHLVGCGTAMHAGMVGKSAIETLARV--PAEVDIASEFRYRD-PILEKNDLVIIISQS 352

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + +  A L  A+   +P++AI +   S +A  AD V+     PE     +A T + ++
Sbjct: 353 GETSDTLAALKLAKSRGVPVLAIVNVVGSSIARAADYVMYTYAGPEIA---VASTKAYMV 409

Query: 182 QLAIGDALAIALLESRN 198
           Q+ +    A+ L  +R 
Sbjct: 410 QMCVLYLFALRLAYARG 426


>gi|262047807|ref|ZP_06020757.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293379826|ref|ZP_06625948.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|312978103|ref|ZP_07789848.1| putative phosphosugar-binding transcriptional regulator
           [Lactobacillus crispatus CTV-05]
 gi|260571864|gb|EEX28435.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290923598|gb|EFE00479.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|310895078|gb|EFQ44147.1| putative phosphosugar-binding transcriptional regulator
           [Lactobacillus crispatus CTV-05]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 29/118 (24%), Positives = 56/118 (47%), Gaps = 1/118 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AV+ ++A + ++ + G G SG     L   L  +G  + FV ++  +   +  I  +D+
Sbjct: 122 SAVQLMRAAQ-KIYVAGEGASGLAAQDLFYKLIRSGKDAAFVQSSHIALEQVANIKTEDI 180

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           +I  S+SG + E   +   A+     +IA+T    S +   AD ++ LP   +   +G
Sbjct: 181 LITFSYSGLTQEPLLMAKQAKENQAKIIAVTRAQNSPLKDIADTIIALPSNEKLLRYG 238


>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 164

 Score = 43.5 bits (101), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 46/92 (50%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +     G + VV+E  ++ GIITE D+ R          V+D M ++ K + EDT +  A
Sbjct: 29  MKNHNMGSMMVVNEKNQVVGIITERDMVRALADKRLDAKVKDYMTESVKGVTEDTTVEEA 88

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ ++    L ++    K +GIV   DL R
Sbjct: 89  LNIMLENGFRHLPIIGKDGKIMGIVSIRDLAR 120


>gi|332655343|ref|ZP_08421083.1| transcriptional regulator, RpiR family [Ruminococcaceae bacterium
           D16]
 gi|332515848|gb|EGJ45458.1| transcriptional regulator, RpiR family [Ruminococcaceae bacterium
           D16]
          Length = 298

 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 11/194 (5%)

Query: 12  TRKGH-SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           T++ H +L K+ + +   + I A +   S+L  +LQ  L+ Q    V  I +   R+++ 
Sbjct: 97  TQQYHPALTKDDSTESICQKIFASE--TSALTKTLQN-LNIQIIEQVAGILSTARRILLC 153

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G S  +       L   G  +  V   +    +  ++ R+D+++  S SG++      
Sbjct: 154 GTGGSQVVARDAQHKLLKVGIHASAVEDKDIQLMEASLLEREDVLVAFSHSGNNVHTLRA 213

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE--SCPHGLAPTTSAIMQLAIGDA 188
           +  AR+    ++ +TS  K+ +A  AD  LT   EP   S   G    ++ + QLA+ D 
Sbjct: 214 VELARQNRATIVVLTSSGKTQLAQEADYTLTTVSEPTIFSSESG----STRLAQLAVIDC 269

Query: 189 LAIALLESRNFSEN 202
           L +A++  +N+ ++
Sbjct: 270 L-VAVIAFQNYDKS 282


>gi|293394837|ref|ZP_06639127.1| N-acetylmuramic acid 6-phosphate etherase [Serratia odorifera DSM
           4582]
 gi|291422588|gb|EFE95827.1| N-acetylmuramic acid 6-phosphate etherase [Serratia odorifera DSM
           4582]
          Length = 225

 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D  +  R
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGVVVGLIAGGPGALLKAVEGAEDDAELGAR 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D++I L+ SG +  +   L YAR+   P  AI+    S +A  A + ++ 
Sbjct: 123 DLRDLQLTATDMVIGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIAQEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|269103712|ref|ZP_06156409.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163610|gb|EEZ42106.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 620

 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLL 302
           I+  +     AV+ E Q++ GIIT+ D+ +    D       +  VM ++P  I    L+
Sbjct: 180 IMRYQHHSSCAVIIENQQIIGIITDRDMTKRVIADGVSTDAPITQVMTRHPYTIGSQDLV 239

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+ L+ +HNI  L VVD+ Q+ +G++   DL+R
Sbjct: 240 LKAVGLMMEHNIRSLPVVDN-QQVVGLLTTSDLVR 273


>gi|186470410|ref|YP_001861728.1| signal transduction protein [Burkholderia phymatum STM815]
 gi|184196719|gb|ACC74682.1| putative signal transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 151

 Score = 43.5 bits (101), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 48/91 (52%), Gaps = 12/91 (13%)

Query: 259 EGQKLKGIITEGDIFRNF----------HKDLNTLS--VEDVMIKNPKVILEDTLLTVAM 306
           E + L+G++++ D+ R             +D+ TLS  V  +M + P  +  D  +T A+
Sbjct: 40  EDRSLQGVVSDRDLLRALSPFIDSVVETQRDIGTLSRRVHQIMSRKPITLRPDADVTDAI 99

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           QLL  H IS + +VD     +GIV + D+L+
Sbjct: 100 QLLLAHPISCIPIVDGEFHPVGIVSWRDILK 130


>gi|328854683|gb|EGG03814.1| hypothetical protein MELLADRAFT_117255 [Melampsora larici-populina
           98AG31]
          Length = 720

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 10/114 (8%)

Query: 231 PLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS- 284
           PL  +  P    + DA  + + KR  CV VVDE + L GI T  D+ FR     L+  S 
Sbjct: 96  PLPALTVPDNITVADASQLCAAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGLDPRST 155

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V ++M KNP V  + T  T A+  +       L V   C +   ++  LD+ +
Sbjct: 156 LVSEIMTKNPMVTRDTTSATEALTTMVTRGFRHLPV---CNEEGDVIGLLDITK 206


>gi|48477960|ref|YP_023666.1| CBS domain-containing protein [Picrophilus torridus DSM 9790]
 gi|48430608|gb|AAT43473.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
          Length = 143

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 3/98 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV-ILED 299
           A +I+S +  G + +V   +KL GI+TE DI R   K +    +V  +  KN  + I ED
Sbjct: 27  AASIMSGENKGSI-LVGTPEKLTGIVTERDIIRAIAKSIPVNDNVSKIATKNNLIFIDED 85

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +T A  L+ +HNI  L+V     K  GI+   DL R
Sbjct: 86  EPITKAAALMGKHNIRHLIVKSKSGKVTGIISTRDLFR 123


>gi|163846201|ref|YP_001634245.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222523951|ref|YP_002568421.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus sp. Y-400-fl]
 gi|163667490|gb|ABY33856.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447830|gb|ACM52096.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus sp. Y-400-fl]
          Length = 493

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA+ +++E +   V V      L GIIT  D+   F  D N   + D+M  +N   + E 
Sbjct: 113 DALDLMAEYKISGVPVTTADGDLVGIITNRDL--RFETDRNR-PIRDLMTSRNLVTVPEG 169

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L +H I  ++VVD+  K  G++   D+++
Sbjct: 170 TTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMK 207


>gi|296454706|ref|YP_003661849.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JDM301]
 gi|296184137|gb|ADH01019.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 517

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 95/243 (39%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRKIV 56

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 103

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+     +D
Sbjct: 104 KRSESGMITDPLTVNPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASED 163

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+DVM K      P  I +D     A +LL QH +  L +VD+     G++   D
Sbjct: 164 YDTLKVKDVMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDEEGHLTGLITVKD 219

Query: 335 LLR 337
            ++
Sbjct: 220 FVK 222


>gi|169344189|ref|ZP_02865171.1| CBS domain protein [Clostridium perfringens C str. JGS1495]
 gi|169297647|gb|EDS79747.1| CBS domain protein [Clostridium perfringens C str. JGS1495]
          Length = 206

 Score = 43.5 bits (101), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 59/115 (51%), Gaps = 8/115 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFH 277
           +M   +++ LV     L DA+ I+ + +F  + VVD G K +G + +  I++     N  
Sbjct: 6   IMTKKENLDLVDSNTKLKDALKIMEDNKFLSIPVVD-GDKFRGAVAKSSIYKYYFKHNLS 64

Query: 278 KD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           KD  LN ++V +++     +I +   +  A+ +L +  IS + VVD+     GI+
Sbjct: 65  KDEVLNNITVGEILKTEVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGIL 119



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 17/49 (34%), Positives = 27/49 (55%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +P++     +  A+++L   R   VAVVDE    KGI+T   +FR F+
Sbjct: 81  EVPIINKSEHIEKAVSMLERMRISFVAVVDEFDNFKGILTHKTVFREFN 129


>gi|296504791|ref|YP_003666491.1| CBS domain-containing protein [Bacillus thuringiensis BMB171]
 gi|296325843|gb|ADH08771.1| CBS domain-containing protein [Bacillus thuringiensis BMB171]
          Length = 163

 Score = 43.5 bits (101), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 14  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 73

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+L+ +  I  + 
Sbjct: 74  VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELI-ERQIDAMP 132

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 133 VVKDTKQGLEVI 144


>gi|119477018|ref|ZP_01617299.1| CBS domain containing membrane protein [marine gamma
           proteobacterium HTCC2143]
 gi|119449825|gb|EAW31062.1| CBS domain containing membrane protein [marine gamma
           proteobacterium HTCC2143]
          Length = 204

 Score = 43.5 bits (101), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 7/104 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKV 295
           L D   +L+ K F  + +VD+ Q+L+GI+++ D+ R   N ++ +   S+E +M +  +V
Sbjct: 91  LNDTWKLLAAKGFHHLPIVDDRQQLQGIVSDRDLLRYAANDNRQVGGYSIEQLMTR--EV 148

Query: 296 ILEDTLLTVAM--QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I  D    V +  +++    I  + +V D  + +GIV   D+LR
Sbjct: 149 ISADANAEVRLLAEIMCSRAIGSIPIVGDGAEVVGIVSRTDILR 192


>gi|219670935|ref|YP_002461370.1| CBS domain containing protein [Desulfitobacterium hafniense DCB-2]
 gi|219541195|gb|ACL22934.1| CBS domain containing protein [Desulfitobacterium hafniense DCB-2]
          Length = 208

 Score = 43.5 bits (101), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 21/117 (17%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------------EDV 288
           D + ++ EK+   + VVD+G KL GI+T+GD+         TLS+             DV
Sbjct: 22  DTMALMREKQINRLPVVDKG-KLVGIVTDGDLREVSPSPATTLSIFELNYLVGKTSIRDV 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-------HFLDLLRF 338
            +K       DT +  A  L+R+H I  L VV++  K +GIV        FLD++ F
Sbjct: 81  AVKKVITCTPDTKIEDAALLMREHGIGALPVVENG-KLVGIVTESDIFDTFLDIMGF 136


>gi|283767932|ref|ZP_06340847.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283461811|gb|EFC08895.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
          Length = 292

 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 72/172 (41%), Gaps = 4/172 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R  +++       +  Q     + +K   G + + G G S  
Sbjct: 88  LIENESVETLKNKMIA--RATNTMRFVATNIMDAQIDAICDVLKN-AGTIFLFGFGASSL 144

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
               L   L+  G     +H         G     D +I ++  GS  EL++I   A  +
Sbjct: 145 TIGDLFQKLSRIGLNVRLLHETHLLVSTFGTHDDRDCMIFVTNQGSHSELQSIAQVATHY 204

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           SIP+I I+S   + VA  AD  L   +  E+    +A TTS   QL   D L
Sbjct: 205 SIPIITISSTANNPVAQIADYALIYGRTDEN-EMRMAATTSLFAQLFTVDIL 255


>gi|150016792|ref|YP_001309046.1| RpiR family transcriptional regulator [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903257|gb|ABR34090.1| transcriptional regulator, RpiR family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 281

 Score = 43.5 bits (101), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 3/85 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN-KSVVACHADIVLTLPKEPESCPH 171
           D+ + +S+SG + E+   +  AR   +P+IAIT  +  + +A  +DIV+ +P   +S   
Sbjct: 180 DVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIVIRIPAVEKSIRE 239

Query: 172 GLAPTTSAIMQLAIGDALAIALLES 196
           G    +S I QLAI D L I ++ +
Sbjct: 240 G--AISSRISQLAIIDMLYIGMIRN 262


>gi|229823300|ref|ZP_04449369.1| hypothetical protein GCWU000282_00598 [Catonella morbi ATCC 51271]
 gi|229787075|gb|EEP23189.1| hypothetical protein GCWU000282_00598 [Catonella morbi ATCC 51271]
          Length = 280

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + GIG SG +   L   L     P  +          +      D+++V+S+SG++ 
Sbjct: 131 RLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRDTHVLMAQMAHCMPGDVVLVVSYSGNTH 190

Query: 126 ELKAILYYARRFSIPLIAITSEN-KSVVACHADIVLTLPKEPES 168
            +  + Y A+     +IAIT  N K+ +A  AD+ L +P++ + 
Sbjct: 191 TVNQMAYLAKEQGAKIIAITGHNLKAPLASLADVCLFIPRDEKE 234


>gi|194017343|ref|ZP_03055955.1| 6-phospho 3-hexuloisomerase [Bacillus pumilus ATCC 7061]
 gi|194011211|gb|EDW20781.1| 6-phospho 3-hexuloisomerase [Bacillus pumilus ATCC 7061]
          Length = 185

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V + G G+SG +G   A  L+  G  ++ V             T +DL+IV S SG ++
Sbjct: 38  KVFVAGAGRSGLMGKSFAMRLSHIGVKAYVVGETNTPS-----FTEEDLLIVGSGSGRTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP----ESCPHGLAPTTSAIM 181
            L  +   A+     + + T   +S +A  +D V+ L   P    E   H + P  S   
Sbjct: 93  TLLVLAKKAKAIGGKVASFTLSAESPLADQSDQVILLSGAPKDQQEGSHHTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ + L+E +       Y  H
Sbjct: 153 QSLLLTYDAVILRLMEMKKLDTQTMYGHH 181


>gi|218296612|ref|ZP_03497330.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
 gi|218242925|gb|EED09458.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
          Length = 150

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 29/144 (20%)

Query: 220 ASDVMHSGD-SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE--------- 269
           A D+M S   S+PL   G  L +   ++ E+R G V VVD   +L GI+TE         
Sbjct: 4   AKDLMVSPVVSVPL---GTNLEEVARLMVERRIGSVLVVDGEGRLVGIVTESDFLKERGI 60

Query: 270 ----------------GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                           GD      ++  T  VE++M      +  +  L   + L+  ++
Sbjct: 61  PFSTFRAPMLLGRFLNGDQLERLLQEARTTKVEEIMTSPVHAVGLEAPLREVLDLMLTYD 120

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I+ + VVD+  + +GI+   DLLR
Sbjct: 121 INHVPVVDEAGRPVGIISRFDLLR 144


>gi|159029735|emb|CAO87813.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 899

 Score = 43.5 bits (101), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE  +L G+I+  D+    H   +   V+  M  NPK I  DT L     
Sbjct: 345 RYGHSGLSVVDEQDRLVGVISRRDLDLALHHGFSRSPVKGYMTCNPKTITPDTSLQEIES 404

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +++  L V+++ Q  +GIV   D+LR
Sbjct: 405 LMVTYDLGRLPVLENGQ-LVGIVTRTDVLR 433


>gi|305431911|ref|ZP_07401078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
 gi|304444995|gb|EFM37641.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
          Length = 484

 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V V+D  +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVIDSDRKLIGILTNRDL--RFENDYSNL-VENVMTKAPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++  ++ +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|259506701|ref|ZP_05749603.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259165719|gb|EEW50273.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
          Length = 506

 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQL 308
           R   + VVD+   L GI T  D+   F  D N L V DVM   P ++ E+ +    A+QL
Sbjct: 130 RISGLPVVDKDGTLLGICTNRDM--RFESDPNRL-VTDVMTPMPLIVAEEGVAKEDALQL 186

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +VD   K +G++   D ++
Sbjct: 187 LSTHKVEKLPIVDKNNKLVGLITVKDFVK 215


>gi|25027164|ref|NP_737218.1| inositol-5-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|23492445|dbj|BAC17418.1| IMP dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 513

 Score = 43.1 bits (100), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQL 308
           R   + VVD+   L GI T  D+   F  D N L V DVM   P ++ E+ +    A+QL
Sbjct: 137 RISGLPVVDKDGTLLGICTNRDM--RFESDPNRL-VTDVMTPMPLIVAEEGVAKEDALQL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +VD   K +G++   D ++
Sbjct: 194 LSTHKVEKLPIVDKNNKLVGLITVKDFVK 222


>gi|308174623|ref|YP_003921328.1| hypothetical protein BAMF_2732 [Bacillus amyloliquefaciens DSM 7]
 gi|307607487|emb|CBI43858.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
 gi|328554549|gb|AEB25041.1| hypothetical protein BAMTA208_14400 [Bacillus amyloliquefaciens
           TA208]
 gi|328912953|gb|AEB64549.1| hypothetical protein LL3_03018 [Bacillus amyloliquefaciens LL3]
          Length = 438

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRF----GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           D +    EK +    G   V+D+  K+ GI+T  DI  +      ++ +E VM KNP  +
Sbjct: 208 DKLEKWYEKNYETGHGRFPVIDQQMKIHGILTSKDIAGHDR----SVPIEKVMTKNPVTV 263

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  T +  A Q++    I VL V D   + IG++   D+L+
Sbjct: 264 IGKTSVASAAQMMVWEGIEVLPVTDGHHRLIGMISRQDVLK 304


>gi|238762802|ref|ZP_04623771.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           kristensenii ATCC 33638]
 gi|238699107|gb|EEP91855.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           kristensenii ATCC 33638]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 42/166 (25%), Positives = 83/166 (50%), Gaps = 7/166 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++AEK  +++L ++L      +   A+  ++A + R+++TG+G SG +   LA  L   G
Sbjct: 100 LLAEK--VAALRATLDINSEQRLAEALAMLRAAR-RIILTGLGASGLVAKDLAHKLLKIG 156

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +       A    +  +   DL++ +S+SG   EL      A+R    ++A+TS   +
Sbjct: 157 VMAVSETDMHAQLAAVQTLDTRDLLLAISFSGERRELNLAAEEAQRCGAKVLALTSFTPN 216

Query: 151 VVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            +   AD  L T+ +EP      ++ +T+   Q A+ D L +A+++
Sbjct: 217 SLQQRADHCLYTISEEPAIRSAAISSSTA---QYALTDLLFMAMIQ 259


>gi|218905434|ref|YP_002453268.1| CBS domain protein [Bacillus cereus AH820]
 gi|218539524|gb|ACK91922.1| CBS domain protein [Bacillus cereus AH820]
          Length = 210

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  +AM+ + +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMEXI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + +V
Sbjct: 180 VVKDTKQGLEVV 191


>gi|167746159|ref|ZP_02418286.1| hypothetical protein ANACAC_00855 [Anaerostipes caccae DSM 14662]
 gi|317473291|ref|ZP_07932586.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
 gi|167654674|gb|EDR98803.1| hypothetical protein ANACAC_00855 [Anaerostipes caccae DSM 14662]
 gi|316899127|gb|EFV21146.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
          Length = 186

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 12/160 (7%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVEK+     R+ I+G G+SG      ++ L   G   +FV            I   DL+
Sbjct: 28  AVEKLITEAKRIFISGAGRSGFAARGFSNRLMHLGYTVYFVGEPTTPS-----IQAGDLL 82

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           IV S SG++  L +    A+     +  IT   ++ +   AD V+TLP   + C +    
Sbjct: 83  IVGSGSGNTASLVSNAKKAKSQGAKVATITMFPENTIGSMADAVITLPGVTKKCDNHEGA 142

Query: 176 TT-----SAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            T     S   QL+    D + + L+   + S++D +  H
Sbjct: 143 GTVQAAGSGFEQLSWITYDCMVMDLMRITSQSDDDLFARH 182


>gi|78044420|ref|YP_359009.1| CBS/GGDEF domain-containing protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996535|gb|ABB15434.1| CBS/GGDEF domain protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 271

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 5/92 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++  +R G + VV E +KL GIIT  D+   F+ + N L + D M + P VI E
Sbjct: 22  LWDAKELMRSQRIGGLPVV-ENEKLIGIITSKDLI--FYPE-NRLVI-DAMTEEPVVIEE 76

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              L  A Q + ++NI  L V+D+     GI+
Sbjct: 77  KAYLFDAYQKMLENNIERLPVIDESGALTGII 108


>gi|116753344|ref|YP_842462.1| hypothetical protein Mthe_0019 [Methanosaeta thermophila PT]
 gi|116664795|gb|ABK13822.1| protein of unknown function DUF39 [Methanosaeta thermophila PT]
          Length = 503

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  ++   RF  + VV +  KL GIIT  DI +    + N   V ++M +       D 
Sbjct: 400 EAARVIVGSRFDHLPVVSDDGKLMGIITTWDISKAV-ANGNISRVSEIMTRRVYTATPDE 458

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +A + +  H+IS L VVD   + IG++   DL R 
Sbjct: 459 PIELAARTMDIHSISALPVVDKDNRVIGMITSNDLSRL 496


>gi|169825631|ref|YP_001695789.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
           C3-41]
 gi|168990119|gb|ACA37659.1| Inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
           C3-41]
          Length = 487

 Score = 43.1 bits (100), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  +L +EDVM K   + 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDL--RFISDY-SLKIEDVMTKEDLIT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L +VD+  +  G++   D+
Sbjct: 165 APVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDI 204


>gi|225075035|ref|ZP_03718234.1| hypothetical protein NEIFLAOT_00034 [Neisseria flavescens
           NRL30031/H210]
 gi|224953631|gb|EEG34840.1| hypothetical protein NEIFLAOT_00034 [Neisseria flavescens
           NRL30031/H210]
          Length = 282

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 77/167 (46%), Gaps = 22/167 (13%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLA--------STL 86
           L +  +SL GE  F     +E   AI     RV   G+G SG +             ST+
Sbjct: 98  LGNAAASLLGERRFLKESELENAIAILKHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTV 157

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           A   T +  + A+        ++T  D+++ +S +GSS EL      A+     +IA+T 
Sbjct: 158 AYVDTHTQLMAAS--------VLTEQDVLVAISNTGSSIELLDAASIAKENGAAVIALT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 209 RNDSPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|307152913|ref|YP_003888297.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
 gi|306983141|gb|ADN15022.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
          Length = 1613

 Score = 43.1 bits (100), Expect = 0.055,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 62/137 (45%), Gaps = 8/137 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +N+ E DF  + P   +G +     + M  G+S     +  P         +K+  C A+
Sbjct: 11  KNYIERDFLTVTPETLVGQVL----EQMSGGESPGNYLVTPPPNTNPKNTPKKKVSC-AL 65

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVA--MQLLRQHN 313
           V EG+KL G+ TE D  +     L     V DVM +N    LE  +      +  ++QH 
Sbjct: 66  VQEGEKLIGLFTERDAVKLTAAQLPLDTCVADVMTRNLITRLESEIGDCCELIHFMQQHQ 125

Query: 314 ISVLMVVDDCQKAIGIV 330
           +  L +VD  Q+ +GI+
Sbjct: 126 VRHLPIVDLAQRPVGII 142


>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
          Length = 154

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 127


>gi|126460001|ref|YP_001056279.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249722|gb|ABO08813.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 136

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 13/114 (11%)

Query: 231 PLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVE- 286
           P + IG    + +A  +++EK  G +A+VDEG +  GIITE D+ +    + L    VE 
Sbjct: 9   PPITIGRDATVEEAAALMAEKGVGSLAIVDEGGRPVGIITERDVVKAVARRALGARVVEV 68

Query: 287 ----DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +++  +P    ED    V ++ +R+  +  L+VVD   K +G++   D L
Sbjct: 69  GTTSNLLTASP----EDDEYEV-LKKMRERRVRHLLVVDKEGKLVGVLSIRDFL 117


>gi|126178350|ref|YP_001046315.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125861144|gb|ABN56333.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 378

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 8/122 (6%)

Query: 218 VCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V  +D M S    P+V +    PL   + ++ E +     VVD G  L GI+   D+ + 
Sbjct: 255 VTVADAMSS----PVVTVEPTLPLPRVVDMMYETKHLGFPVVDRG-SLAGIVALADVHKI 309

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D   + V DVM ++P V+     L  A++++    I  + VV+D    +GIV   D+
Sbjct: 310 SPIDREAMQVRDVMTRDPTVLPPSAPLIDALRIITGQEIGRIPVVED-DTLVGIVTRTDV 368

Query: 336 LR 337
           LR
Sbjct: 369 LR 370


>gi|57640493|ref|YP_182971.1| hypothetical protein TK0558 [Thermococcus kodakarensis KOD1]
 gi|57158817|dbj|BAD84747.1| hypothetical protein, conserved, containing CBS domains and PHD
           finger motif [Thermococcus kodakarensis KOD1]
          Length = 177

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           IL+  + G   VVDE +++ GIIT+ DI        KD   + V+DVM   P  I +D  
Sbjct: 29  ILARNKVGSAVVVDENEEIVGIITDRDILDKVVAKGKDPKKVLVKDVMTTKPVTIEDDYT 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+  +    I  L+V     K IG V   DLL
Sbjct: 89  IQDAIDKMMDKGIRRLLVT-RVGKPIGFVTAADLL 122


>gi|299542092|ref|ZP_07052408.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
           ZC1]
 gi|298725407|gb|EFI66055.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
           ZC1]
          Length = 487

 Score = 43.1 bits (100), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  +L +EDVM K   + 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDL--RFISDY-SLKIEDVMTKEDLIT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L +VD+  +  G++   D+
Sbjct: 165 APVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDI 204


>gi|302697565|ref|XP_003038461.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
 gi|300112158|gb|EFJ03559.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
          Length = 658

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKV 295
           + +A  + + KR  CV VVD+ + L GI T  D+ +R   +  D +T  V  +M +NP V
Sbjct: 80  VAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVHAIMTRNPMV 139

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + T  T A++L+   +   L V   C +   +V  LD+ +
Sbjct: 140 TRDTTSATEALELMVTRHFRHLPV---CNEDGNVVGLLDIAK 178


>gi|330835171|ref|YP_004409899.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567310|gb|AEB95415.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           ++AITI+  + FG + VV+  ++  GI+TE D    F       S+ + +      + ++
Sbjct: 94  LEAITIMVTRNFGSLPVVNMLKRPVGIVTERDFLLMFQDLDQMFSISNFITPKVNTVFKE 153

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           TLL  A++ + +     L V+D+  + +GIV
Sbjct: 154 TLLEQAVRQMLRRGFRRLPVIDEEGRVVGIV 184


>gi|312126707|ref|YP_003991581.1| putative signal transduction protein with cbs domains
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311776726|gb|ADQ06212.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 123

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K      ++
Sbjct: 22  ALEQMQKRKKSVAVVVDENDFLKGIIVKADIYRFLSQPGHFETYPVELAMTKAVITADKN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    +LLRQH+IS + V+D+  K +G+V   D++ + I
Sbjct: 82  DDIKDVAKLLRQHDISAVPVLDNG-KVVGLVGLEDIVDYFI 121


>gi|311278262|ref|YP_003940493.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308747457|gb|ADO47209.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 274

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 7/128 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   +T+DDL++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLTKDDLVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+    ++A+++  +S +A  +D++L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKRGARVLALSNTPRSPLATLSDMLLVAAK-----PEG--PLSAGALTAKVG 239

Query: 187 DALAIALL 194
             L + LL
Sbjct: 240 VMLLVELL 247


>gi|149182108|ref|ZP_01860592.1| transcriptional regulator (RpiR family) protein [Bacillus sp. SG-1]
 gi|148850210|gb|EDL64376.1| transcriptional regulator (RpiR family) protein [Bacillus sp. SG-1]
          Length = 284

 Score = 43.1 bits (100), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 10/132 (7%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSWSGSSDEL 127
           G G SG +          TG     VHA+  SH  L     +T+ D  +++S SGS+ ++
Sbjct: 140 GSGGSGIVAMDAYHKFIRTG---LRVHASTDSHIQLMTASQMTKKDCAVLISHSGSTKDI 196

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIG 186
             ++   +      IAIT+  KS ++  ADI L T+ +E +     L   +S I QL+I 
Sbjct: 197 LQVMKVLKESGAKTIAITNFAKSPLSEKADISLYTVSEETDYRSEAL---SSRIAQLSIF 253

Query: 187 DALAIALLESRN 198
           DAL ++++  R+
Sbjct: 254 DALYVSIMLKRD 265


>gi|57167939|ref|ZP_00367078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
 gi|57020313|gb|EAL56982.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
          Length = 484

 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A+ I++E R   V V+D  +KL GI+T  D+   F  D + L VE+VM K P +   + 
Sbjct: 107 EALEIMAEYRISGVPVIDSDRKLIGILTNRDL--RFENDYSNL-VENVMTKAPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++  ++ +  L +VD+  +  G++   DL +
Sbjct: 164 CTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|89897787|ref|YP_521274.1| hypothetical protein DSY5041 [Desulfitobacterium hafniense Y51]
 gi|89337235|dbj|BAE86830.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 214

 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 57/117 (48%), Gaps = 21/117 (17%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------------EDV 288
           D + ++ EK+   + VVD+G KL GI+T+GD+         TLS+             DV
Sbjct: 28  DTMALMREKQINRLPVVDKG-KLVGIVTDGDLREVSPSPATTLSIFELNYLVGKTSIRDV 86

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV-------HFLDLLRF 338
            +K       DT +  A  L+R+H I  L VV++  K +GIV        FLD++ F
Sbjct: 87  AVKKVITCTPDTKIEDAALLMREHGIGALPVVENG-KLVGIVTESDIFDTFLDIMGF 142


>gi|88859047|ref|ZP_01133688.1| hypothetical protein PTD2_08584 [Pseudoalteromonas tunicata D2]
 gi|88819273|gb|EAR29087.1| hypothetical protein PTD2_08584 [Pseudoalteromonas tunicata D2]
          Length = 612

 Score = 43.1 bits (100), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 8/87 (9%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLR 310
           +V E  +L G++T+ D+ RN  + L T      SV  +M   PK I E+  +  A+ L+ 
Sbjct: 184 MVMENDRLVGVVTDRDL-RN--RVLATEIDPKESVSLIMSAKPKYIFENNRVFSALHLML 240

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +HNI  L V+D+  K +G++   DLLR
Sbjct: 241 RHNIHHLPVLDENHKPLGMLTSTDLLR 267


>gi|153937473|ref|YP_001387245.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           Hall]
 gi|152933387|gb|ABS38886.1| transcriptional regulator, RpiR family [Clostridium botulinum A
           str. Hall]
          Length = 179

 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 18  LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 74

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 75  RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 134

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 135 G--AISSRTSQLFVTDSL 150


>gi|126652925|ref|ZP_01725067.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
 gi|126590255|gb|EAZ84377.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
          Length = 487

 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  +L +EDVM K   + 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDL--RFISDY-SLKIEDVMTKEDLIT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L +VD+  +  G++   D+
Sbjct: 165 APVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDI 204


>gi|323141507|ref|ZP_08076395.1| CBS domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414023|gb|EFY04854.1| CBS domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 219

 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 60/112 (53%), Gaps = 14/112 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------VE 286
           +++A  I+  KR   + VVD+ Q+++GIIT  DI +    D +TLS            V+
Sbjct: 20  ILEAREIMRGKRLISLPVVDDMQRVRGIITSDDIGKASPSDSSTLSRYEANYLLGRLKVK 79

Query: 287 DVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DVM ++   V  +DT+  VA +L + + ++ L VV+   K  GIV   D+ R
Sbjct: 80  DVMKRSVISVEADDTIEYVAYKLYK-YKVNALPVVNQENKLCGIVSRSDIFR 130


>gi|270264776|ref|ZP_06193041.1| N-acetylmuramic acid 6-phosphate etherase [Serratia odorifera
           4Rx13]
 gi|270041459|gb|EFA14558.1| N-acetylmuramic acid 6-phosphate etherase [Serratia odorifera
           4Rx13]
          Length = 297

 Score = 43.1 bits (100), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   AS    T             G P   + A E +  D  +   
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVVGLIAGGPGALLKAVEGAEDDAALGEA 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  D+++ L+ SG +  +   L YARR   P  AI+    S +A  A + ++ 
Sbjct: 123 DLQALTLTATDMVVGLAASGRTPYVIGALRYARRLGCPTAAISCNPDSPIAHEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|156740229|ref|YP_001430358.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus castenholzii
           DSM 13941]
 gi|156231557|gb|ABU56340.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus castenholzii
           DSM 13941]
          Length = 507

 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA+ +++E R   + +      L GI+T  D+   F  D  +  + D+M  +N   + E 
Sbjct: 130 DALDLMAEYRISGIPITTPDGDLIGIVTNRDL--RFETD-RSRPIRDLMTTRNLITVPEG 186

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A Q+L +H I  L+VVD   K  G++   D+++
Sbjct: 187 TTLEQAKQILHEHRIEKLLVVDRRGKLSGMITVKDIMK 224


>gi|315185782|gb|EFU19548.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6578]
          Length = 481

 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G  + +A  ++ +     + VVDE   L GI+T  D+   F KD   L VE+VM  +
Sbjct: 101 VRKGQTVREAKALMQQYNISGLPVVDEKGTLCGILTGRDL--RFVKD-ERLKVEEVMTPD 157

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P V      +  A +   +H +  L +VD+  K IG+V   D+
Sbjct: 158 PVVERGRPTIDQAQEAFDRHKVEKLPLVDETGKLIGLVTVKDI 200


>gi|304440257|ref|ZP_07400147.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371306|gb|EFM24922.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 483

 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ I+S  +   V +V+E   L+GIIT  DI    N+ + +  +   + +I  P    E
Sbjct: 107 DALDIMSNYKISGVPIVNEKGHLEGIITNRDIRFETNYERPICEVMTSENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L  A+++L+ H I  L +VDD     G++   D+ + 
Sbjct: 163 NISLDDALKILKSHKIEKLPLVDDGNYLKGLITIKDIEKM 202


>gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
 gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
          Length = 481

 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  I+SE R   V VVDE   L GI+T  D+   F KD +   V +VM K P V  +  
Sbjct: 107 EAEKIMSEYRISGVPVVDEDMHLLGILTNRDL--RFEKDFSK-KVSEVMTKMPLVTAKPG 163

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L  A + + +H I  L ++D   +  G+V   D+ +
Sbjct: 164 ITLEEAAEKMNEHKIEKLPIIDAEGRLKGLVTIKDIKK 201


>gi|156743706|ref|YP_001433835.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 225

 Score = 43.1 bits (100), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 12/113 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----------FRNFHKDLNTLSVED 287
           L +A  ++ ++R   + VV+ G KL GIIT GD+           +  +   L+ ++V +
Sbjct: 23  LAEAQRLMEQRRIRRLPVVENG-KLIGIITRGDLRAAQPADTTLSYYEWRALLDRVTVVE 81

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            M ++   I  D     A +L+  + I  L VVDD  + IGI+   DL R  I
Sbjct: 82  CMTRHVVTITPDASALDAARLMLTYKIGGLPVVDDEGRVIGIITESDLFRLQI 134


>gi|297521346|ref|ZP_06939732.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 79

 Score = 43.1 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 1   EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 60

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 61  G-DHLLGVLHMHDLLRAGVV 79


>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
           ubonensis Bu]
          Length = 153

 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
            SG ++  V+    + DAI +++EK  G + V+D G  + GI+TE D  R      +   
Sbjct: 14  ESGRTVYTVRKTDLVYDAIKLMAEKGIGALLVMD-GDDISGIVTERDYARKIVLQDRSSK 72

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              VE++M    + +         M L+ +H +  L V+DD  K IG++   DL++
Sbjct: 73  ATRVEEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLDDG-KLIGLISIGDLVK 127


>gi|261749537|ref|YP_003257223.1| Inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497630|gb|ACX84080.1| Inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 491

 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  ++ +     + V+++ Q L GIIT  DI   +  DL++L VEDVM K   +  +
Sbjct: 109 LREAQYLMKKYHISGLPVIEKDQTLVGIITNRDI--KYRMDLDSL-VEDVMTKEKLITSK 165

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L  A  +L +  I  L +VDD +K +G++   D+
Sbjct: 166 KNITLEEAKNILLKERIEKLPIVDDLKKLVGLITIRDI 203


>gi|296108758|ref|YP_003615707.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433572|gb|ADG12743.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 131

 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 63/118 (53%), Gaps = 6/118 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM  G  +  V +   L + + I+ +     V VV +G++  GI+T+ DI +N+H +L+
Sbjct: 9   DVMTKG--VVEVPLDTKLEEIVKIMDKYNISSV-VVSDGEQFWGIVTDTDILKNYH-NLD 64

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLLRF 338
             + E+VM     ++  +  L  A+ L+ +H I  L V   C+ + IG++   D+++ 
Sbjct: 65  K-TAEEVMTSKVILVTPEAPLEKAIDLMVEHKIHHLYVKSSCEDRIIGVISSRDIIKL 121


>gi|152976728|ref|YP_001376245.1| CBS domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025480|gb|ABS23250.1| CBS domain containing protein [Bacillus cytotoxicus NVH 391-98]
          Length = 211

 Score = 43.1 bits (100), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQTTLL 121

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  VAM+L+ +  I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCHKEDSLYDVAMELI-ERQIDAIP 180

Query: 319 VVDDCQKAIGIV 330
           VV + ++ + +V
Sbjct: 181 VVKETKQGLEVV 192


>gi|18978199|ref|NP_579556.1| hypothetical protein PF1827 [Pyrococcus furiosus DSM 3638]
 gi|18894010|gb|AAL81951.1| hypothetical protein PF1827 [Pyrococcus furiosus DSM 3638]
          Length = 279

 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSV 285
            +P VK    L  A  ++ E  +  V V+DE  K  GI+T GDI R +    +    + +
Sbjct: 69  DVPTVKPDDTLKKAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKSEKYKDVEI 128

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E    +   V+   T L  A++ L   N   L V+DD  K IGIV   DLLR
Sbjct: 129 EPYYQRYVSVVWRGTPLMAALKALLLSNAMALPVIDDDGKLIGIVDETDLLR 180


>gi|224369971|ref|YP_002604135.1| AcuB2 [Desulfobacterium autotrophicum HRM2]
 gi|223692688|gb|ACN15971.1| AcuB2 [Desulfobacterium autotrophicum HRM2]
          Length = 229

 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------RNFH-KDLNTLSV 285
           +I+A  I+       + VVD+   L+GIIT+ DI             RN   + +  ++V
Sbjct: 20  VIEAQEIMQANDIRHLPVVDKDNHLQGIITDRDIRSSMPFMLFDEKERNLQLEKIKKMTV 79

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D+M  NPK I     +  A+ L+++  +    VVD+     GI+   DLLR
Sbjct: 80  ADIMTPNPKTISPMDTIQDALLLIQREKVGAFPVVDEKGALTGILSVRDLLR 131


>gi|118593740|ref|ZP_01551109.1| transcriptional regulatory protein [Stappia aggregata IAM 12614]
 gi|118433650|gb|EAV40313.1| transcriptional regulatory protein [Stappia aggregata IAM 12614]
          Length = 307

 Score = 43.1 bits (100), Expect = 0.061,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)

Query: 56  AVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           AVEKI A + +++  GIG  S  +  + AS     G P+  +H +         +  DD+
Sbjct: 140 AVEKIAACR-QLLTAGIGGGSTMVAGEAASRFFRLGIPTVALHDSYLLQMRAATLGPDDV 198

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSE-NKSVVACHADIVLTLPKEPESCPHGL 173
           ++ +S SG +DEL +    A  +    IAI  + ++  +     I++ LP++P+      
Sbjct: 199 LLCVSASGEADELVSAAEIAGGYGATTIAIAPKGSRLALISKIPILVDLPEDPDI----Y 254

Query: 174 APTTSAIMQLAIGDALAIALLESR--NFSEN 202
            PT S    L I DA+A+ + + R    SEN
Sbjct: 255 KPTASRYAHLVIVDAIAMTVAQVRAATTSEN 285


>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 121

 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKV 295
           + DA+ +L+E+R G + V D G ++ GI +E D+  +      D+    V DVM      
Sbjct: 1   MADAVELLAERRIGALPVEDVGAEVAGIFSERDVLYSLQTNGADILRRKVRDVMTTPVIT 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D  +  A+ L+ Q  I  L V++D  + I  +   DL+++ I
Sbjct: 61  ASPDQSVLEALALMTQRRIRHLPVMEDG-RMIAFISIGDLVKYRI 104


>gi|313897884|ref|ZP_07831425.1| choline ABC transporter, ATP-binding protein OpuBA [Clostridium sp.
           HGF2]
 gi|312957419|gb|EFR39046.1| choline ABC transporter, ATP-binding protein OpuBA [Clostridium sp.
           HGF2]
          Length = 377

 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 12/133 (9%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKI----------GCPLIDAITILSEKRFGCVAVV 257
           HP  +  + FV  + +  S + I    I          G  L+ A   +   +   + VV
Sbjct: 226 HPVNEFVSSFVGKNRIWDSPELIRASDIMIKRVITTYPGVSLVRAYEYMRYNKVDTLMVV 285

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           D  Q L+G+IT   + R   +D N L V D+M+       ED  L   MQ  RQH+   +
Sbjct: 286 DHSQMLQGMIT-AKMIRRQPRD-NHLLVRDIMVNPAYCAQEDDNLVDVMQQTRQHDFYNV 343

Query: 318 MVVDDCQKAIGIV 330
            V+D+  K  G++
Sbjct: 344 PVLDEQGKLRGLI 356


>gi|228475113|ref|ZP_04059840.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
 gi|228270877|gb|EEK12274.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
          Length = 182

 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 14/142 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G+SG++ +  A  L   G  +  +  A         I   DL+I++S SGS++
Sbjct: 38  RIFTAGKGRSGYVANSFAMRLNQLGKDASAIGEATTP-----SIKEHDLLIIISGSGSTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP------KEPESCPHGLAPTTSA 179
            L+ +   A      +  IT++ +S +   AD V+ LP       E    P G     S+
Sbjct: 93  HLRLLAEKAHSVGAQIALITTKTESKIGDVADTVIALPAGTKHEAEGSEQPLGSLFEQSS 152

Query: 180 IMQLAIGDALAIALLESRNFSE 201
           ++ L   D++ I L+++ N +E
Sbjct: 153 LIFL---DSVVIGLMDAFNINE 171


>gi|52786539|ref|YP_092368.1| HxlB [Bacillus licheniformis ATCC 14580]
 gi|52349041|gb|AAU41675.1| HxlB [Bacillus licheniformis ATCC 14580]
          Length = 136

 Score = 43.1 bits (100), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T +DL+IV + SG ++ L  +   A+     + A+T+ + S +A  AD++L LP  P+  
Sbjct: 28  TENDLLIVGTGSGKTESLLHMAEKAKDIGGTVAAVTTSSDSPIAEIADLILQLPGSPKDQ 87

Query: 170 PHG----LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
             G    + P  S   Q  L I DA+ + ++E +  + ++ Y  H
Sbjct: 88  TTGSKQTIQPMGSLFEQTLLLIYDAIILRIMEIKGLNTHNMYANH 132


>gi|260943069|ref|XP_002615833.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
 gi|238851123|gb|EEQ40587.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
          Length = 627

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 54/118 (45%), Gaps = 3/118 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD 279
           S V+ S  +     + C +++A   + E R   V V D   +L GI T  D+  R     
Sbjct: 266 SSVLDSATTPIYTNVKCSVLEATIQMKENRTTAVLVNDTSGELTGIFTSKDVVLRVIAAG 325

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           LN  T SV  VM   P V  E T +  A++ + + +   L VVD+    IGIV  L L
Sbjct: 326 LNPKTCSVVRVMTPQPDVANERTSIQQALRQMFEGHYLNLPVVDNEGDIIGIVDVLKL 383



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDV 288
           + K    +  A  ++S +R  C+ VV++  +L GI T  D+ FR     LN  +  +E +
Sbjct: 105 ICKKNATVYQAAQLMSARRENCILVVNDDGELIGIFTAKDLAFRVVGSGLNANATLIEQI 164

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M  +P     D+  + A+ L+ +     L V+DD  + +G++
Sbjct: 165 MTPSPICANADSPASEALTLMVEKGFRHLPVLDDKSRIVGVL 206


>gi|227546620|ref|ZP_03976669.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239621652|ref|ZP_04664683.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|312134014|ref|YP_004001353.1| guab [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482069|ref|ZP_07941093.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|322691728|ref|YP_004221298.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|227212937|gb|EEI80816.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239515527|gb|EEQ55394.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|291516317|emb|CBK69933.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum F8]
 gi|311773319|gb|ADQ02807.1| GuaB [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916428|gb|EFV37826.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|320456584|dbj|BAJ67206.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 517

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 95/243 (39%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRKIV 56

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 103

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+     +D
Sbjct: 104 KRSESGMITDPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASED 163

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+DVM K      P  I +D     A +LL QH +  L +VD+     G++   D
Sbjct: 164 YDTLKVKDVMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDEEGHLTGLITVKD 219

Query: 335 LLR 337
            ++
Sbjct: 220 FVK 222


>gi|212703508|ref|ZP_03311636.1| hypothetical protein DESPIG_01553 [Desulfovibrio piger ATCC 29098]
 gi|212673076|gb|EEB33559.1| hypothetical protein DESPIG_01553 [Desulfovibrio piger ATCC 29098]
          Length = 485

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           +A+ ++++ R   + VVD+G KL GI+T  D+   F +D + + V +VM  KN   +   
Sbjct: 108 EALDLMADFRVSGLPVVDDG-KLVGILTNRDV--RFIEDASAIRVGEVMTSKNLVTVPMG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A + L +H I  L+VVD+ ++  G++   D+
Sbjct: 165 TSLEEAKRHLHEHRIEKLLVVDENERLRGLITMKDI 200


>gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 155

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 56/128 (43%), Gaps = 30/128 (23%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------------------- 275
           L +A+ IL+EKRF  + VVD+  +L G+I+E D+                          
Sbjct: 22  LSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQETGVEAPPYIMLLDSVIYLQNPS 81

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGI 329
                 HK L   +V +VM   P  I  D  L  A  L+   ++  L V+ ++  K IGI
Sbjct: 82  RHEKLLHKALGQ-TVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEETHKVIGI 140

Query: 330 VHFLDLLR 337
           V   D++R
Sbjct: 141 VTRGDIIR 148



 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D+M  NP  +  +T L+ A+++L +   S L VVDD  + IG++   DL+
Sbjct: 2   TKTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56


>gi|23466267|ref|NP_696870.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           NCC2705]
 gi|23327016|gb|AAN25506.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           NCC2705]
          Length = 545

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 32/231 (13%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +  +T    ++ 
Sbjct: 34  DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRKIV 84

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS--------DVMHSGDS----IPL 232
           +   +  A +++   SE    +   GG +G L    S        DV+   +S     PL
Sbjct: 85  MKAPVLSAAMDTVTESEMAIAMARNGG-IGVLHRNLSIDDQAAQVDVVKRSESGMITDPL 143

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DVM K
Sbjct: 144 TVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDVMTK 203

Query: 292 N-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 P  I +D     A +LL QH +  L +VD+     G++   D ++
Sbjct: 204 ENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 250


>gi|189440761|ref|YP_001955842.1| IMP dehydrogenase/GMP reductase [Bifidobacterium longum DJO10A]
 gi|189429196|gb|ACD99344.1| IMP dehydrogenase/GMP reductase [Bifidobacterium longum DJO10A]
          Length = 517

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 95/243 (39%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRKIV 56

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 103

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+     +D
Sbjct: 104 KRSESGMITDPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASED 163

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+DVM K      P  I +D     A +LL QH +  L +VD+     G++   D
Sbjct: 164 YDTLKVKDVMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDEEGHLTGLITVKD 219

Query: 335 LLR 337
            ++
Sbjct: 220 FVK 222


>gi|238793768|ref|ZP_04637389.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           intermedia ATCC 29909]
 gi|238726832|gb|EEQ18365.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           intermedia ATCC 29909]
          Length = 280

 Score = 43.1 bits (100), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 4/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++TGIG SG +   LA  L   G  +       A    +  +   DL++ +S+SG   
Sbjct: 132 RIILTGIGASGLVAKDLAYKLLKIGIMAVSETDMHAQLAAVQALDARDLLLAISFSGERR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A+R    ++A+TS + + +   AD  L T+ +EP      ++ +T+   Q A
Sbjct: 192 EINLAAEEAQRSGAKVLALTSFSPNSLQQRADHCLYTISEEPAIRSAAISSSTA---QYA 248

Query: 185 IGDALAIALLESRNFSEND 203
           + D L +A+++    S  D
Sbjct: 249 LTDLLFMAMIQQDLESAQD 267


>gi|332977128|gb|EGK13931.1| nucleotidyltransferase [Psychrobacter sp. 1501(2011)]
          Length = 351

 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILED 299
           +A+ IL E       V D+  KL G +T+GDI R   K  +   SV  VM KNPK I + 
Sbjct: 18  EAMRILDETALRIAIVCDDNNKLLGTVTDGDIRRGLLKSCDMQDSVTAVMNKNPKTIKQA 77

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 +++  ++++  L +VD+    +G+
Sbjct: 78  HTRQQRIEIFDRYDLLALPIVDNQNYLVGL 107


>gi|222530248|ref|YP_002574130.1| CBS domain containing protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457095|gb|ACM61357.1| CBS domain containing protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 123

 Score = 43.1 bits (100), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K      ++
Sbjct: 22  ALEQMQKRKKSVAVVVDENNFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKAVITASQN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    +LLR+H+IS + VVD+  K IG++   D++ + I
Sbjct: 82  DDIKQVAKLLREHDISAVPVVDNG-KVIGLIGLEDIVDYFI 121


>gi|153838938|ref|ZP_01991605.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
 gi|149747609|gb|EDM58537.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
          Length = 622

 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-LSVEDVMIKNPKVILED 299
           A T+  ++R  C  V+ EG+ + G++T+ D+ ++   +D++T   + DVM  NP +I +D
Sbjct: 179 AQTMCGKQRSSCAVVMKEGEII-GLVTDRDMTKSVVAQDMDTNQPIADVMTPNPVLIEDD 237

Query: 300 TLLTVAMQLLRQHNISVLMVV 320
             +  A+ L+ Q+NI  L VV
Sbjct: 238 AKVIQAISLMLQYNIRCLPVV 258


>gi|28899930|ref|NP_799585.1| hypothetical protein VPA0075 [Vibrio parahaemolyticus RIMD 2210633]
 gi|254227512|ref|ZP_04920944.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|260363224|ref|ZP_05776093.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|260880511|ref|ZP_05892866.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260898536|ref|ZP_05907032.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260902237|ref|ZP_05910632.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
 gi|262396222|ref|YP_003288075.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|28808213|dbj|BAC61418.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|151940124|gb|EDN58950.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|262339816|gb|ACY53610.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|308084963|gb|EFO34658.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308092451|gb|EFO42146.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308110479|gb|EFO48019.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308112509|gb|EFO50049.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|328469917|gb|EGF40828.1| Signal transduction protein [Vibrio parahaemolyticus 10329]
          Length = 622

 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-LSVEDVMIKNPKVILED 299
           A T+  ++R  C  V+ EG+ + G++T+ D+ ++   +D++T   + DVM  NP +I +D
Sbjct: 179 AQTMCGKQRSSCAVVMKEGEII-GLVTDRDMTKSVVAQDMDTNQPIADVMTPNPVLIEDD 237

Query: 300 TLLTVAMQLLRQHNISVLMVV 320
             +  A+ L+ Q+NI  L VV
Sbjct: 238 AKVIQAISLMLQYNIRCLPVV 258


>gi|268324812|emb|CBH38400.1| conserved hypothetical protein containing CBS domain pair
           [uncultured archaeon]
          Length = 154

 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 32/122 (26%), Positives = 57/122 (46%), Gaps = 29/122 (23%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFH----------------------- 277
           T+L E     V VV++ +++ G+++  DI +   +FH                       
Sbjct: 27  TVLKENSIAGVPVVNDRKEVVGVVSVSDILKLLDDFHWYTPFFSAMDILHLHSDELENVK 86

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              ++++ + V+D M KNPK I  DTL+  A Q++     + L V+D   K +GIV   D
Sbjct: 87  RDIEEVSEMKVKDAMSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGKLVGIVARAD 146

Query: 335 LL 336
           ++
Sbjct: 147 II 148


>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
 gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
          Length = 183

 Score = 43.1 bits (100), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 7/156 (4%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           +A A L +R+ S N        G+ G      A+ +   G+ +  V+    ++ A+ +L+
Sbjct: 14  VANARLAARS-SRNRITGPADAGEQGEQAMTIATILQRKGNDVIQVEPSDSVLSAVRLLA 72

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTV 304
           ++R GCV VV  GQ + GI +E D+     +D  +    SV +VM      I E T +  
Sbjct: 73  DQRIGCVPVVANGQ-VVGIFSERDLVYRVAQDGPSALDHSVGEVMTAPAITIDEQTSVMQ 131

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + L+ +  I  L VV D   A G++   DL++F I
Sbjct: 132 GLSLMTKRRIRHLPVVVDGALA-GMISIGDLVKFRI 166


>gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
          Length = 153

 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           +G +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  AGRTIYTVTKADLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQTTDECMALMTEHRMRHLPVLDDG-KLVGLISIGDLVK 127


>gi|301062296|ref|ZP_07202962.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300443596|gb|EFK07695.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 149

 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 58/104 (55%), Gaps = 6/104 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD--LNTLSVEDVMIKNPK 294
           L DA+  ++E+    + V+D G+K  GIITE DI R++  H D  L+ + V+DVM +   
Sbjct: 23  LKDAVLTMTEQNQSALIVMD-GRKTVGIITERDILRSYVKHGDLPLSKIQVKDVMTEKLI 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V   D  + V + L+RQ  I  L V+ +  + I +++  DL  +
Sbjct: 82  VAKSDDEIDVTISLMRQAGIRHLPVL-EAGEIISLLNICDLAHY 124


>gi|322807606|emb|CBZ05181.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           H04402 065]
          Length = 484

 Score = 43.1 bits (100), Expect = 0.066,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ + +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKEG-KLVGIITNRDILFENNYERKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|307596435|ref|YP_003902752.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307551636|gb|ADN51701.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 255

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           A+V +G +L GIITE DI     + +     V +V  ++P  + ED  L  AM+++ +H 
Sbjct: 100 ALVLKGNELAGIITERDIVNKMPEQVFVKYRVHEVANRDPIRVSEDASLASAMEVMVRHG 159

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I  L++ D   + +GI+   D+LR+ I
Sbjct: 160 IRHLLIADQ-DRLLGIMTVKDVLRYAI 185


>gi|238762803|ref|ZP_04623772.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia kristensenii
           ATCC 33638]
 gi|238699108|gb|EEP91856.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia kristensenii
           ATCC 33638]
          Length = 305

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D+ +  R
Sbjct: 73  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGAEDDMSLGER 132

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D+++ L+ SG +  +   L YAR+   P  AI+    S +A  A + ++ 
Sbjct: 133 DLQNLQLTAVDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIAQEALVAISP 192

Query: 163 PKEPES 168
              PE+
Sbjct: 193 VVGPEA 198


>gi|52081156|ref|YP_079947.1| 6-phospho-3-hexuloisomerase HxlB [Bacillus licheniformis ATCC
           14580]
 gi|52004367|gb|AAU24309.1| 6-phospho-3-hexuloisomerase HxlB [Bacillus licheniformis ATCC
           14580]
          Length = 130

 Score = 43.1 bits (100), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T +DL+IV + SG ++ L  +   A+     + A+T+ + S +A  AD++L LP  P+  
Sbjct: 22  TENDLLIVGTGSGKTESLLHMAEKAKDIGGTVAAVTTSSDSPIAEIADLILQLPGSPKDQ 81

Query: 170 PHG----LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
             G    + P  S   Q  L I DA+ + ++E +  + ++ Y  H
Sbjct: 82  TTGSKQTIQPMGSLFEQTLLLIYDAIILRIMEIKGLNTHNMYANH 126


>gi|312140826|ref|YP_004008162.1| imp dehydrogenase guab [Rhodococcus equi 103S]
 gi|311890165|emb|CBH49483.1| IMP dehydrogenase GuaB [Rhodococcus equi 103S]
          Length = 488

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP   +  P+ +  +T    ++ +G  L  + +++   +     +   GG +G L
Sbjct: 7   DDVLLLPAASDVVPNQVDTSTQLTREIRLGVPLVSSAMDTVTEARMAISMARAGG-MGVL 65

Query: 217 FVCASDVMHSG--DSIPLVKIG-------CPLIDAIT----ILSEKRFGCVAVVDEGQKL 263
              +S    SG  +++   + G       C   D I     + +  R   + V ++  +L
Sbjct: 66  HRNSSVEAQSGWVETVKRSEAGMVTDPVTCKPTDTIADVEAMCARFRISGLPVANDAGEL 125

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDD 322
            GIIT  D+   F  D N   V +VM K P +   E     VA+ LLR+H +  L +VD 
Sbjct: 126 VGIITNRDM--QFEVDQNR-QVAEVMTKAPLITAREGVTAEVALGLLRRHKVEKLPIVDG 182

Query: 323 CQKAIGIVHFLDLLR 337
             K  G++   D ++
Sbjct: 183 QGKLTGLITVKDFVK 197


>gi|187931967|ref|YP_001891952.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712876|gb|ACD31173.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 486

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQESAIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 141



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 110 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPREKLVTVPEDA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 167 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|229542418|ref|ZP_04431478.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
 gi|229326838|gb|EEN92513.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
          Length = 282

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 59/132 (44%), Gaps = 2/132 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +VV  G+G S              G  S F          +  + + D+ + LS SG + 
Sbjct: 133 KVVFFGVGGSVTAAVDACYKFTRLGCQSIFSQDYHYLISLIPYMNKMDVFVALSVSGRTK 192

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++  +  +A+R    +IAIT+  KS +   ADI L  P   E    G   T+S + QL I
Sbjct: 193 DVLELADFAKRKGAKVIAITNMEKSPLYKEADIRLCTPITEEDFRIG--TTSSRMAQLNI 250

Query: 186 GDALAIALLESR 197
            DAL +++ + +
Sbjct: 251 IDALYLSVFQRK 262


>gi|302543446|ref|ZP_07295788.1| CBS domains protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302461064|gb|EFL24157.1| CBS domains protein [Streptomyces himastatinicus ATCC 53653]
          Length = 139

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 220 ASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--- 275
           A+D+MH G   IP  +    L  A  ++ +   G + + D  ++L GI+T+ DI      
Sbjct: 4   AADIMHPGAQWIPATE---NLERAAQLMRDLDVGALPISDSQERLCGILTDRDIVVGCVA 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +D + ++  D+    P+ I  D  ++  ++ +  H I  L V+D  ++ +G++   DL
Sbjct: 61  QGRDPSRMTAGDLAKGTPRWISSDADVSEVLREMEDHRIRRLPVIDKNKRLVGMISEADL 120

Query: 336 LR 337
            R
Sbjct: 121 AR 122


>gi|138896311|ref|YP_001126764.1| thioesterase family protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249933|ref|ZP_03148628.1| putative signal-transduction protein with CBS and DRTGG domains
           [Geobacillus sp. G11MC16]
 gi|134267824|gb|ABO68019.1| Thioesterase family protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210447|gb|EDY05211.1| putative signal-transduction protein with CBS and DRTGG domains
           [Geobacillus sp. G11MC16]
          Length = 435

 Score = 43.1 bits (100), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V   D++   +    +++  P+     +  E R     VV++  K++GI+T  D+    
Sbjct: 188 IVLVEDIIIPLEKTAYLRVNDPIERWYVLNKETRHSRFPVVNDDWKVQGIVTAKDVL--- 244

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D++  L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+   D+
Sbjct: 245 --DMDRQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDHHRLQGIISRQDV 302

Query: 336 LR 337
           L+
Sbjct: 303 LK 304


>gi|330834038|ref|YP_004408766.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329566177|gb|AEB94282.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIK 291
           +K    L +A  IL         V+D+   + GIIT  D+ R F+  +LN L V D M +
Sbjct: 185 LKPNMTLKEAAGILYSAGIRGAPVLDDNSNVTGIITTADLMRAFYDGNLNAL-VSDYMKR 243

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   I ED  +  A++ +  +N+  L+V+D   +  G+V   D+L+
Sbjct: 244 DVITIKEDDDIMEAVKKMVTYNVGRLLVMDAINRVTGMVTRTDILK 289


>gi|166367342|ref|YP_001659615.1| histidine kinase like sensor protein [Microcystis aeruginosa
           NIES-843]
 gi|166089715|dbj|BAG04423.1| histidine kinase like sensor protein [Microcystis aeruginosa
           NIES-843]
          Length = 387

 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 57/104 (54%), Gaps = 13/104 (12%)

Query: 237 CPLIDAITILS----EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           C L D ++ L+    E R  C+ VV +GQ+L GI+TE D+ R   +  +L+  +V DVM+
Sbjct: 45  CLLTDDLSPLAAPAGEVRVSCLLVV-QGQELLGILTERDVVRLTAQGINLSETTVADVMV 103

Query: 291 KN----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 P+   +D     A+ L R++ I  L +VDD  + IG++
Sbjct: 104 HPLITLPQQSAQDIF--AALFLFRRYRIRHLPIVDDQGQLIGVI 145


>gi|86739349|ref|YP_479749.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. CcI3]
 gi|86566211|gb|ABD10020.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. CcI3]
          Length = 537

 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 14/108 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-- 293
           G  L DA  +++  R   V V +   +L GI+T  DI   F +D +   V+DVM   P  
Sbjct: 140 GATLEDANVLMARYRISGVPVTESDGRLVGIVTNRDI--RFERDYSR-RVQDVMTPMPLI 196

Query: 294 ----KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                V  ED     A+ LLR+H +  L +VD+  +  G++   D  +
Sbjct: 197 TAPVGVSPED-----ALALLRRHKVEKLPIVDERDRLRGLITVKDFTK 239


>gi|159186197|ref|NP_356144.2| RpiR family transcriptional regulator [Agrobacterium tumefaciens
           str. C58]
 gi|159141331|gb|AAK88929.2| transcriptional regulator, RpiR family [Agrobacterium tumefaciens
           str. C58]
          Length = 271

 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFF 95
           G SSLE  L+   + Q   AV  +   K R V I G+ +S  I S LA        P+  
Sbjct: 117 GRSSLEMLLKSVDTKQLDEAVSALS--KARTVHIMGLRRSFPIASYLAYAFEKMKVPAV- 173

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           +H+A    G++  I+RDD +I +++S  S E   +   AR   IP++A++
Sbjct: 174 LHSAVGGLGNISAISRDDALIAITFSPYSTETLELAENARANGIPVVALS 223


>gi|85710353|ref|ZP_01041418.1| CBS domain protein [Erythrobacter sp. NAP1]
 gi|85689063|gb|EAQ29067.1| CBS domain protein [Erythrobacter sp. NAP1]
          Length = 620

 Score = 42.7 bits (99), Expect = 0.070,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKN 292
           +  P+  A+ I+ E     +A+ D G  L GI T+ DI +    D       +  VM  N
Sbjct: 168 LDAPISSAVAIMVEHDVSTLAICDNG-ALAGIFTDKDIRKRVVADAVPFDHPISAVMTAN 226

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P+ + + + +  AM L+       L ++DD    +GIV   D+L
Sbjct: 227 PRTLPQHSPIAEAMALMASGGFRHLPILDDSGALMGIVSATDIL 270


>gi|124027017|ref|YP_001012337.1| transcriptional regulator [Hyperthermus butylicus DSM 5456]
 gi|123977711|gb|ABM79992.1| predicted transcriptional regulator [Hyperthermus butylicus DSM
           5456]
          Length = 296

 Score = 42.7 bits (99), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++ E+R   + V+D   +L GIIT+ DI +   +     +V++ M      I  D 
Sbjct: 194 DAAKLMIERRVKGLPVIDSRGRLIGIITQTDIAKAVAEGRIDATVKEYMSFPVITIRSDE 253

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A++L+   +I  L+V D   K IGI+   D+L+F
Sbjct: 254 DIGDAIELMNLRDIGRLVVTDSEGKPIGIITRTDILKF 291


>gi|54022862|ref|YP_117104.1| inosine 5'-monophosphate dehydrogenase [Nocardia farcinica IFM
           10152]
 gi|54014370|dbj|BAD55740.1| putative inosine-5'-monophosphate dehydrogenase [Nocardia farcinica
           IFM 10152]
          Length = 489

 Score = 42.7 bits (99), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + VVDE   L GIIT  D+   F  D N   V DVM K P +  ++ +    A+ L
Sbjct: 112 RISGLPVVDETGALVGIITNRDM--RFEVDQNR-RVADVMTKAPLITAQEGVTAEAALGL 168

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H +  L +VD   +  G++   D ++
Sbjct: 169 LRRHKVEKLPIVDGNGRLRGLITVKDFVK 197


>gi|318606790|emb|CBY28288.1| sialic acid utilization regulator, RpiR family [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV++TG+G SG +   LA  L   G  +       A    +  +   DL++ +S+SG   
Sbjct: 132 RVILTGLGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A+R    ++A+TS   + +   AD  L T+ +EP      ++ +T+   Q A
Sbjct: 192 EINLAAEEAQRCGAKVLALTSFTPNSLQQRADHCLYTISEEPAIRSAAISSSTA---QYA 248

Query: 185 IGDALAIALLESRNFSEND 203
           + D L +A+++    S  D
Sbjct: 249 LTDLLFMAMIQQDLESAQD 267


>gi|327294133|ref|XP_003231762.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
           118892]
 gi|326465707|gb|EGD91160.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
           118892]
          Length = 660

 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 104 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIM 163

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 164 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 204


>gi|123441371|ref|YP_001005358.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088332|emb|CAL11123.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.073,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV++TG+G SG +   LA  L   G  +       A    +  +   DL++ +S+SG   
Sbjct: 132 RVILTGLGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A+R    ++A+TS   + +   AD  L T+ +EP      ++ +T+   Q A
Sbjct: 192 EINLAAEEAQRCGAKVLALTSFTPNSLQQRADHCLYTISEEPAIRSAAISSSTA---QYA 248

Query: 185 IGDALAIALLESRNFSEND 203
           + D L +A+++    S  D
Sbjct: 249 LTDLLFMAMIQQDLESAQD 267


>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 218

 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 18/128 (14%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------H 277
           D++  V+ G P  +   +L E     V VVDE  +  G+++E D+ +            H
Sbjct: 7   DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSAEH 66

Query: 278 KDLNTLSV--------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            + +  S           +M   P   LE   +  A++++ +H I  L+VVD   +  G+
Sbjct: 67  AEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGDGRLAGV 126

Query: 330 VHFLDLLR 337
           V   DLLR
Sbjct: 127 VSRSDLLR 134


>gi|159029312|emb|CAO90178.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 390

 Score = 42.7 bits (99), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 56/104 (53%), Gaps = 13/104 (12%)

Query: 237 CPLIDAITILS----EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMI 290
           C L D ++ L+    E R  C+ VV +GQ+L GI+TE D+ R   + +N    +V DVM+
Sbjct: 48  CLLTDDLSPLAAPAGEARVSCLLVV-QGQELLGILTERDVVRLTAQGINLTETTVADVMV 106

Query: 291 KN----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 P+   +D     A+ L R++ I  L +VDD  + +G++
Sbjct: 107 HPLITLPQQSAQDIF--AALFLFRRYRIRHLPIVDDQGQLVGVI 148


>gi|257053669|ref|YP_003131502.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
 gi|256692432|gb|ACV12769.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
          Length = 384

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V E  KL G+IT+ DI      +L+ L+VE +   +     EDT +   +  LR+H 
Sbjct: 97  VAPVFEANKLWGVITDDDILSAVIDNLDALTVEQIFTGDVVTATEDTEVGQVINKLREHG 156

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           IS + V++D  K  G+V   D++
Sbjct: 157 ISRVPVLNDDGKLTGMVTRHDIV 179


>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
 gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 215

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           +A+ ++ + +   + V+ + +K+ GI+TE D+                H  L+ L +E++
Sbjct: 22  EALKLMKQNKIKRLIVM-KNEKIVGIVTEKDLLYASPSKATTLNIWELHYLLSKLKIEEI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+   + E+T +  A +++ + +IS L VVDD  + +GI+   D+ +
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFK 129



 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             P+ DA  I+ EK    + VVD+  +L GIIT+ DIF+ F
Sbjct: 91  NTPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVF 131



 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+ + +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVMKN-EKIVGIVTEKDLL 53


>gi|315056125|ref|XP_003177437.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
           118893]
 gi|311339283|gb|EFQ98485.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
           118893]
          Length = 660

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 104 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIM 163

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 164 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 204


>gi|256783160|ref|ZP_05521591.1| hypothetical protein SlivT_01575 [Streptomyces lividans TK24]
          Length = 223

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 18/128 (14%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------H 277
           D++  V+ G P  +   +L E     V VVDE  +  G+++E D+ +            H
Sbjct: 12  DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSAEH 71

Query: 278 KDLNTLSV--------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            + +  S           +M   P   LE   +  A++++ +H I  L+VVD   +  G+
Sbjct: 72  AEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGDGRLAGV 131

Query: 330 VHFLDLLR 337
           V   DLLR
Sbjct: 132 VSRSDLLR 139


>gi|254517653|ref|ZP_05129709.1| inositol-monophosphate dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226911402|gb|EEH96603.1| inositol-monophosphate dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 482

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 5/97 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDT 300
           A  ++++ R   V +   G KL GIIT  DI   F  + + L V +VM K+P +   E T
Sbjct: 109 AQELMAQYRISGVPIT-RGTKLVGIITNRDIV--FETNYDRL-VSEVMTKSPLITSGEGT 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A+++L++H I  L +VDD     G++   D+ +
Sbjct: 165 TLEQALEILKKHKIEKLPLVDDDNNLKGLITIKDIEK 201


>gi|150400148|ref|YP_001323915.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150012851|gb|ABR55303.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 322

 Score = 42.7 bits (99), Expect = 0.075,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 70/144 (48%), Gaps = 8/144 (5%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N SEND   L+    L    + AS++M     +  +K      + + ++ E R     VV
Sbjct: 34  NESENDLIRLYDLKILEK--ISASEIMTK--KVISLKEDDSTEELVRLIKEYRHMGYPVV 89

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHN 313
           D   KL GI+T  D+     K   L  L ++D+M K  N   I  +T  + A +++ +H+
Sbjct: 90  DSNNKLSGIVTFEDLRTKKQKFGALKKLKIKDIMTKKGNLITISNETSASEAQRIMVKHD 149

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L+VVD  +  +GI+   D++R
Sbjct: 150 IGRLIVVDSMENFVGILTKGDIVR 173


>gi|311070656|ref|YP_003975579.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
 gi|310871173|gb|ADP34648.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
          Length = 488

 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  ++ + DVM +   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNNEDQKLVGIITNRDL--RFISDY-SMKISDVMTREELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 APVGTTLDQAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|261364129|ref|ZP_05977012.1| transcriptional regulator HexR [Neisseria mucosa ATCC 25996]
 gi|288567712|gb|EFC89272.1| transcriptional regulator HexR [Neisseria mucosa ATCC 25996]
          Length = 282

 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 46/167 (27%), Positives = 74/167 (44%), Gaps = 14/167 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  SI+ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASILGERRFLK--ESELENAIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G  +              ++T  D+++ +S +GSS EL   +  A+     +IA+T 
Sbjct: 150 FRFGISTVSYVDTHTQLMAASVLTDQDVLVAISNTGSSIELLDAVSIAKENGAAVIALT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 209 RNDSPLAQLADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|58584784|ref|YP_198357.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419100|gb|AAW71115.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 498

 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 59/101 (58%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +AI+++ +  +  + VVD+ +KL G++T  DI   F +D N ++ V +VM K   V + +
Sbjct: 107 EAISLMKKHDYSGIPVVDQ-RKLVGVLTNRDI--RFIEDQNMSIKVSEVMTKEKLVTIRE 163

Query: 300 TLL--TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +    AM+LL ++ I  L+V+D+    IG++   D+ ++
Sbjct: 164 QEVDSASAMKLLHENRIEKLLVIDENFCCIGLITVKDIEKY 204


>gi|146304862|ref|YP_001192178.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145703112|gb|ABP96254.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 300

 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K    L DA  IL ++      V+DE   + GIIT  D+ R F++     +V D M ++
Sbjct: 185 LKPNMSLRDASRILHKEGIRGAPVLDESGNVIGIITTADLMRAFYEGNFDATVSDYMKRD 244

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I E+  +  A++ +  +N+  L+V+D   +  G+V   D+L+
Sbjct: 245 VITIKEEDDIMEAVKKMVTYNVGRLVVMDAINRVTGMVTRTDILK 289


>gi|254229465|ref|ZP_04922880.1| Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits [Vibrio sp. Ex25]
 gi|262392572|ref|YP_003284426.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           sp. Ex25]
 gi|151938036|gb|EDN56879.1| Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits [Vibrio sp. Ex25]
 gi|262336166|gb|ACY49961.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           sp. Ex25]
          Length = 352

 Score = 42.7 bits (99), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+K    L+DA+ I++ +    V VVD+   L G++T+GDI R   K+L  T  V  VM 
Sbjct: 9   LIKPTSSLLDALEIINNEALRVVLVVDDNDHLLGVVTDGDIRRGLLKNLPLTADVAQVMN 68

Query: 291 KNP 293
            NP
Sbjct: 69  TNP 71


>gi|332162684|ref|YP_004299261.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325666914|gb|ADZ43558.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860311|emb|CBX70625.1| uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           enterocolitica W22703]
          Length = 280

 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV++TG+G SG +   LA  L   G  +       A    +  +   DL++ +S+SG   
Sbjct: 132 RVILTGLGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A+R    ++A+TS   + +   AD  L T+ +EP      ++ +T+   Q A
Sbjct: 192 EINLAAEEAQRCGAKVLALTSFTPNSLQQRADHCLYTISEEPAIRSAAISSSTA---QYA 248

Query: 185 IGDALAIALLESRNFSEND 203
           + D L +A+++    S  D
Sbjct: 249 LTDLLFMAMIQQDLESAQD 267


>gi|311029213|ref|ZP_07707303.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus sp. m3-13]
          Length = 185

 Score = 42.7 bits (99), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 62/149 (41%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G+SG +    A  +   G  ++ +              +DD++I+ S SG + 
Sbjct: 38  KIFVAGAGRSGFMAKSFAMRMMHMGIDAYVIGETVTPT-----FEKDDILIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP----ESCPHGLAPTTSAIM 181
            L ++   A+     + A+T   +S +   ADI + +P  P    ES    + P  S   
Sbjct: 93  GLVSMAEKAKSIGGTIAAVTIFPESTIGQLADITIKMPGSPKDQSESNFKTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ +  +E +    N  Y  H
Sbjct: 153 QTLLLFYDAVILRFMEKKGLDTNKMYGKH 181


>gi|302503214|ref|XP_003013567.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
 gi|291177132|gb|EFE32927.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
          Length = 648

 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 92  IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIM 151

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 152 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 192


>gi|197121928|ref|YP_002133879.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp. K]
 gi|196171777|gb|ACG72750.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp. K]
          Length = 487

 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+   PL  A+ ++ E     + VV +G +L GI+T  D+   F K+L    VE VM K+
Sbjct: 102 VEPDAPLHRAVALMRENGISGIPVV-QGGRLLGILTNRDL--RFEKNLEQ-RVEQVMTKD 157

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                E   +  A +LL +H I  L+VV++  +  G+V   D+
Sbjct: 158 LVTAHEGVTIEQAKELLHRHRIEKLLVVNERYELRGLVTIKDI 200


>gi|23016740|ref|ZP_00056493.1| COG0516: IMP dehydrogenase/GMP reductase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 486

 Score = 42.7 bits (99), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L DA+ ++S+ +   + VV+ G  KL GI+T  D+   F  D     V ++M K+  V +
Sbjct: 104 LADALRLMSDYKISGIPVVERGSGKLVGILTNRDV--RFANDA-AQPVYELMTKDKLVTV 160

Query: 298 EDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +    A +LL QH I  L+VVD   + IG+V   D+
Sbjct: 161 REGVDKEEAKRLLHQHRIEKLLVVDSDYRCIGLVTVKDM 199


>gi|325675537|ref|ZP_08155221.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus equi ATCC
           33707]
 gi|325553508|gb|EGD23186.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus equi ATCC
           33707]
          Length = 500

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 85/195 (43%), Gaps = 18/195 (9%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP   +  P+ +  +T    ++ +G  L  + +++   +     +   GG +G L
Sbjct: 19  DDVLLLPAASDVVPNQVDTSTQLTREIRLGVPLVSSAMDTVTEARMAISMARAGG-MGVL 77

Query: 217 FVCASDVMHSG--DSIPLVKIG-------CPLIDAIT----ILSEKRFGCVAVVDEGQKL 263
              +S    SG  +++   + G       C   D I     + +  R   + V ++  +L
Sbjct: 78  HRNSSVEAQSGWVETVKRSEAGMVTDPVTCKPTDTIADVEAMCARFRISGLPVANDAGEL 137

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDD 322
            GIIT  D+   F  D N   V +VM K P +   E     VA+ LLR+H +  L +VD 
Sbjct: 138 VGIITNRDM--QFEVDQNR-QVAEVMTKAPLITAREGVTAEVALGLLRRHKVEKLPIVDG 194

Query: 323 CQKAIGIVHFLDLLR 337
             K  G++   D ++
Sbjct: 195 QGKLTGLITVKDFVK 209


>gi|302652051|ref|XP_003017887.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
 gi|291181469|gb|EFE37242.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
          Length = 648

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 92  IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIM 151

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 152 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 192


>gi|227817073|ref|YP_002817082.1| CBS domain protein [Bacillus anthracis str. CDC 684]
 gi|227005321|gb|ACP15064.1| CBS domain protein [Bacillus anthracis str. CDC 684]
          Length = 210

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 6/132 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P + +   ED+L  + M+L+ +  I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIVMELI-ERQIDAMP 179

Query: 319 VVDDCQKAIGIV 330
           VV D ++ + ++
Sbjct: 180 VVKDTKQGLEVI 191


>gi|88604139|ref|YP_504317.1| signal transduction protein [Methanospirillum hungatei JF-1]
 gi|88189601|gb|ABD42598.1| putative signal transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 291

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 3/137 (2%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           N   V H G  L  +    S +M +   +  +     L +A+ I+   R G + +VDE  
Sbjct: 74  NLINVKHDGNFLAAINESVSKIMKT--DVRTLHPDATLNEALDIILRDRIGGIPIVDEYG 131

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L GI+TE D+ +   +      VE VM ++  V   D  L+   +++ +H    L +V 
Sbjct: 132 VLNGIVTERDVLKILCRSHAATPVESVMTRSLLVQQPDCPLSTVTKVMTEHQFRRLPIVK 191

Query: 322 DCQKAIGIVHFLDLLRF 338
           +     GI+   D++R+
Sbjct: 192 N-DVLFGIITATDIVRY 207


>gi|28211998|ref|NP_782942.1| inosine 5'-monophosphate dehydrogenase [Clostridium tetani E88]
 gi|28204441|gb|AAO36879.1| inosine-5-monophosphate dehydrogenase [Clostridium tetani E88]
          Length = 484

 Score = 42.7 bits (99), Expect = 0.080,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 7/99 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVI 296
           L DA+ ++S+ R   V +  EG KL GIIT  DI    ++ K ++ L  ++ +I  P   
Sbjct: 106 LQDALDLMSKYRISGVPITVEG-KLVGIITNRDIVFEDDYSKKISELMTDEDLITAP--- 161

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E+T +  A ++L++H I  L +VD+     G++   D+
Sbjct: 162 -ENTTIDQAREILKKHKIEKLPLVDENFNLKGLITIKDI 199


>gi|294501520|ref|YP_003565220.1| hypothetical protein BMQ_4784 [Bacillus megaterium QM B1551]
 gi|295706868|ref|YP_003599943.1| hypothetical protein BMD_4770 [Bacillus megaterium DSM 319]
 gi|294351457|gb|ADE71786.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
 gi|294804527|gb|ADF41593.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 438

 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD+  K+ G++T  D+      DL+T S+E VM KNP  +   T +  +  ++    I 
Sbjct: 227 VVDQHMKVHGMVTSKDVI---GYDLST-SIEKVMTKNPMTVHGKTSVASSAHMMVWEGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           VL VVDD  +  GI+   D+L+
Sbjct: 283 VLPVVDDYHRLEGIISRQDVLK 304


>gi|226948624|ref|YP_002803715.1| transcriptional regulator, RpiR family [Clostridium botulinum A2
           str. Kyoto]
 gi|226841231|gb|ACO83897.1| transcriptional regulator, RpiR family [Clostridium botulinum A2
           str. Kyoto]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|51245115|ref|YP_064999.1| acetoin utilization protein AcuB [Desulfotalea psychrophila LSv54]
 gi|50876152|emb|CAG35992.1| related to acetoin utilization protein (AcuB) [Desulfotalea
           psychrophila LSv54]
          Length = 240

 Score = 42.7 bits (99), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 41/144 (28%), Positives = 69/144 (47%), Gaps = 19/144 (13%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLK 264
           L P   L   F+    +MH+     LV I     L+ A  I+  K F  + VV+    L+
Sbjct: 7   LLPPHTLQENFMYIGHIMHTD----LVTISPTTNLVTARKIMDSKSFDHLLVVNNRGVLE 62

Query: 265 GIITEGDIFRNFHKDLNTLS------------VEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           GI+++ D+ +N+     TLS            V+ +M+K    I   T +  A  +++Q+
Sbjct: 63  GILSDKDLKQNWASPATTLSVYELTSLLEQVQVKSIMVKTVLTITVSTTVERAAYIMQQN 122

Query: 313 NISVLMVVDDCQKAIGIVHFLDLL 336
           NIS L V+D+ + A GI+   D++
Sbjct: 123 NISALPVLDNNRLA-GIITSTDVM 145


>gi|305662915|ref|YP_003859203.1| glutamine--fructose-6-phosphate transaminase [Ignisphaera aggregans
           DSM 17230]
 gi|304377484|gb|ADM27323.1| glutamine--fructose-6-phosphate transaminase [Ignisphaera aggregans
           DSM 17230]
          Length = 622

 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 75/164 (45%), Gaps = 15/164 (9%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LSSL  +++      +  +V K+ A   RV+ITG G S H G   A  L        FV 
Sbjct: 285 LSSLSENIE------YIDSVVKLIAKADRVIITGAGTSFHAGYIAALLLNRYA--DIFVL 336

Query: 98  AAEASHGDLGM--ITRDDLIIVLSWSGSS-DELKAILYYARRFSIPLIAITSENKSVVAC 154
              +S     M  +   D++I +S SG + D LKA+   ARR     IAI++   S +  
Sbjct: 337 PIISSEAMWWMNSVGEKDIVIAISQSGETIDTLKAVR-EARRRGALTIAISNVLDSTIPR 395

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +DI L     PE    G+A T +   Q+ +   LAI +   RN
Sbjct: 396 ESDIALYTNAGPEI---GVAATKTFTAQVVLLSYLAINVARYRN 436


>gi|242278922|ref|YP_002991051.1| CBS domain containing protein [Desulfovibrio salexigens DSM 2638]
 gi|242121816|gb|ACS79512.1| CBS domain containing protein [Desulfovibrio salexigens DSM 2638]
          Length = 226

 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 56/116 (48%), Gaps = 14/116 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE-------------GDIFRNFHKDLNT 282
           G P+IDA+ ++ +     + V +    + GI+++             GD        L  
Sbjct: 17  GAPIIDAMEMMRDAGIRQIPVTEASGLVVGIVSDRDVRDAMPSKFLPGDNAAGKGDGLMG 76

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L ++D+M  +P ++  DT + VA ++L +  I  L VVD+    +GIV  +D+ RF
Sbjct: 77  LKIKDIMTHDPYIVSPDTCMEVAAEILLEKKIGGLPVVDEF-GLVGIVTEVDIYRF 131


>gi|90408425|ref|ZP_01216586.1| transcriptional regulator, RpiR family protein [Psychromonas sp.
           CNPT3]
 gi|90310459|gb|EAS38583.1| transcriptional regulator, RpiR family protein [Psychromonas sp.
           CNPT3]
          Length = 283

 Score = 42.7 bits (99), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 45/157 (28%), Positives = 63/157 (40%), Gaps = 19/157 (12%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   V+ I     RV I GIG SG     L+  L   G  +  V  +         + +
Sbjct: 122 QFDTVVKLINK-ANRVQIIGIGGSGLCAQDLSFKLLKIGIITLCVQDSHVQIASAQTLEK 180

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ IV+S+SG+  E+      A      +IAITS+  S +   AD           C H
Sbjct: 181 KDVQIVISYSGNRKEMLLAAEIAHEKGAKVIAITSKCSSPLHAMADF----------CLH 230

Query: 172 GLAPTT--------SAIMQLAIGDALAIALLESRNFS 200
            +A  T        S   Q  I D L ++LL+ R  S
Sbjct: 231 SIADETHYRSSSISSRTAQYVITDLLFLSLLQRREQS 267


>gi|332652371|ref|ZP_08418116.1| transcriptional regulator [Ruminococcaceae bacterium D16]
 gi|332517517|gb|EGJ47120.1| transcriptional regulator [Ruminococcaceae bacterium D16]
          Length = 290

 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 5/156 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  +S+LE +++     Q   A E + + + RV+  G G S  +  + A TL ST +  F
Sbjct: 111 RENISALEQTVKLINGDQLRQAAELLHSAR-RVICMGQGSSMVLAEE-AWTLFSTISSKF 168

Query: 95  -FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+  +      + +++++D+++  S+SGS+ EL+ +L  +R   + +I ++   KS   
Sbjct: 169 AFISDSHFQLNSIALMSKEDVVLFFSYSGSTRELQDVLAVSRPMGVKVILVSRFPKSPGG 228

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             AD+VL         P  +   T+ + QL + D L
Sbjct: 229 QLADLVLQCGS--NEGPLQVGSVTARMAQLFVLDLL 262


>gi|296822790|ref|XP_002850342.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
 gi|238837896|gb|EEQ27558.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
          Length = 658

 Score = 42.7 bits (99), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 99  IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEIM 158

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 159 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 199


>gi|296332343|ref|ZP_06874804.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305673622|ref|YP_003865294.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150261|gb|EFG91149.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411866|gb|ADM36985.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 140

 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 53/102 (51%), Gaps = 14/102 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNP 293
           +A +++ +   G + VV++G  LKG++T+ DI        R+    ++ +   D++  NP
Sbjct: 23  EAASLMKQHNVGAIPVVEQG-VLKGMLTDRDIALRTTAQGRDGQTPVSEVMSTDLVSGNP 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + LED     A QL+ QH I  L +VD     +GIV   DL
Sbjct: 82  NMSLED-----ASQLMAQHQIRRLPIVDQ-NNLVGIVALGDL 117


>gi|238759689|ref|ZP_04620849.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia aldovae ATCC
           35236]
 gi|238702117|gb|EEP94674.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia aldovae ATCC
           35236]
          Length = 295

 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  D+ +  +
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGAEDDMALGAK 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D+++ L+ SG +  +   L YAR    P  AI+    S +A  A + ++ 
Sbjct: 123 DLQDLQLTATDMVVGLAASGRTPYVIGALRYARALGCPTAAISCNPDSPIAQEAQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|284176230|ref|YP_003406507.1| CBS domain containing protein [Haloterrigena turkmenica DSM 5511]
 gi|284017887|gb|ADB63834.1| CBS domain containing protein [Haloterrigena turkmenica DSM 5511]
          Length = 141

 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 3/100 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTLSVEDVMIKNPKVI 296
           L +A   L  +  G + V ++ + + G++T+ D  +  + H D+ +LSVE++M ++P  +
Sbjct: 20  LEEATQTLENENVGALVVTEDDEPV-GMLTDRDAALAIHDHDDVGSLSVEEIMAEDPATV 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ED       + +++ N+    +VDD  +  GI    DL+
Sbjct: 79  HEDDDPLAISEAIKERNVRRFPIVDDDGELAGIATLDDLI 118


>gi|168180012|ref|ZP_02614676.1| transcriptional regulator, RpiR family [Clostridium botulinum NCTC
           2916]
 gi|182669138|gb|EDT81114.1| transcriptional regulator, RpiR family [Clostridium botulinum NCTC
           2916]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|296109952|ref|YP_003616901.1| CBS domain containing membrane protein [Methanocaldococcus infernus
           ME]
 gi|295434766|gb|ADG13937.1| CBS domain containing membrane protein [Methanocaldococcus infernus
           ME]
          Length = 139

 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 6/94 (6%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVA-- 305
           +   + VVD G+KL GI+T  DI  N  KD  TL  +VEDVM K    + ED  +  A  
Sbjct: 38  KISSLPVVD-GEKLIGIVTTTDIGYNLIKDKYTLETTVEDVMTKEVITVYEDESIIEAIK 96

Query: 306 -MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            M + ++  I+ L V++  +K +GI+   D++R 
Sbjct: 97  KMDVKKEEIINQLPVLNREEKLVGIISDGDIIRL 130


>gi|218888209|ref|YP_002437530.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759163|gb|ACL10062.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 486

 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDT 300
           A+ +++E R   + VV  G +L GI+T  D+   F KDL    V +VM  KN   +   T
Sbjct: 109 ALELMAEYRVSGLPVV-RGVELVGILTNRDV--RFVKDLEGTQVREVMTSKNLVTVPVGT 165

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A  LL  H I  L+VVD+  +  G++   D+
Sbjct: 166 TLDEAKDLLHAHRIEKLLVVDEGNRLKGLITMKDI 200


>gi|168184133|ref|ZP_02618797.1| transcriptional regulator, RpiR family [Clostridium botulinum Bf]
 gi|237794699|ref|YP_002862251.1| RpiR family transcriptional regulator [Clostridium botulinum Ba4
           str. 657]
 gi|182672732|gb|EDT84693.1| transcriptional regulator, RpiR family [Clostridium botulinum Bf]
 gi|229263372|gb|ACQ54405.1| transcriptional regulator, RpiR family [Clostridium botulinum Ba4
           str. 657]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|220916721|ref|YP_002492025.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954575|gb|ACL64959.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 487

 Score = 42.7 bits (99), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 4/103 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+   PL  A+ ++ E     + VV +G +L GI+T  D+   F K+L    VE VM K+
Sbjct: 102 VEPDAPLHRAVALMRENGISGIPVV-QGGRLLGILTNRDL--RFEKNLEQ-RVEQVMTKD 157

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                E   +  A +LL +H I  L+VV++  +  G+V   D+
Sbjct: 158 LVTAHEGVTIEQAKELLHRHRIEKLLVVNERYELRGLVTIKDI 200


>gi|283850322|ref|ZP_06367611.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B]
 gi|283574348|gb|EFC22319.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B]
          Length = 485

 Score = 42.7 bits (99), Expect = 0.086,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DT 300
           A+ ++SE     + VVDEG  L GI+T  D+   F KD +   V+DVM K   V +   T
Sbjct: 109 ALVVMSEYSISGLPVVDEGT-LVGIVTNRDV--RFVKD-SVTKVKDVMTKESLVTVPVGT 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A   L Q+ I  L+VVD+  K  G++   D+ + 
Sbjct: 165 TLEEAKHHLHQNRIEKLLVVDENNKLRGLITIKDIEKI 202


>gi|294495151|ref|YP_003541644.1| hypothetical protein Mmah_0470 [Methanohalophilus mahii DSM 5219]
 gi|292666150|gb|ADE35999.1| CBS domain containing membrane protein [Methanohalophilus mahii DSM
           5219]
          Length = 167

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 55/110 (50%), Gaps = 14/110 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLS-------------VE 286
           D + ++ + RF    VVD+  +LKG+I +  +    FH  L + S              +
Sbjct: 48  DTLELIGKYRFHNFPVVDKDYRLKGVIDQNIVLELLFHDRLPSSSHTHLTAVRSLGEDAK 107

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +MI +P  +  DT L   + ++ +HNI+ + VVD+  K IG++   D++
Sbjct: 108 SIMIPHPLKVSRDTSLCEGVDMMLKHNINHVWVVDNDDKLIGVITKHDVI 157


>gi|168182079|ref|ZP_02616743.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Bf]
 gi|237796736|ref|YP_002864288.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum Ba4
           str. 657]
 gi|182674795|gb|EDT86756.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Bf]
 gi|229260658|gb|ACQ51691.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Ba4
           str. 657]
          Length = 484

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  E +KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITKE-EKLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|149181127|ref|ZP_01859627.1| hypothetical protein BSG1_10348 [Bacillus sp. SG-1]
 gi|148851214|gb|EDL65364.1| hypothetical protein BSG1_10348 [Bacillus sp. SG-1]
          Length = 439

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 43/165 (26%), Positives = 69/165 (41%), Gaps = 33/165 (20%)

Query: 176 TTSAIMQLAIGDAL---AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           T +A++  AI D L    I L+E    +E+    LH G  L   +       HS      
Sbjct: 170 TVAAMINRAIYDQLIKKDIVLVEDILTAEDKTVYLHVGDTLEDWYEKNQSTFHS------ 223

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
                            RF    V+D  +K++G++T  D+     KD+    ++ VM K 
Sbjct: 224 -----------------RF---PVIDRNRKVQGMVTSKDVMGQ-EKDV---MIDKVMTKK 259

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  +  +T +  A  ++    I VL VVDD  +  GI+   D+L+
Sbjct: 260 PITVRPNTSVASAAHMMIWEGIEVLPVVDDLNRIQGIISRQDVLK 304


>gi|148379321|ref|YP_001253862.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932792|ref|YP_001383697.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           ATCC 19397]
 gi|148288805|emb|CAL82889.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium botulinum A str. ATCC 3502]
 gi|152928836|gb|ABS34336.1| transcriptional regulator, RpiR family [Clostridium botulinum A
           str. ATCC 19397]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|16077238|ref|NP_388051.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307983|ref|ZP_03589830.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312306|ref|ZP_03594111.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317239|ref|ZP_03598533.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321502|ref|ZP_03602796.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|7404499|sp|Q45582|MURQ_BACSU RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|2632437|emb|CAB11946.1| D-lactyl ether N-acetylmuramic-6-phosphate acid etherase [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 304

 Score = 42.7 bits (99), Expect = 0.087,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 23/136 (16%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAE- 100
           CA E  +   GR++ TG G SG +G   A     T             G P  F+ AAE 
Sbjct: 58  CAYESFQN-GGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPEAFLQAAEG 116

Query: 101 ------ASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                 A   DL  I  T +D +I ++ SG +      L YAR+     IA+T    S +
Sbjct: 117 IEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAI 176

Query: 153 ACHADIVLTLPKEPES 168
           +  AD  + +   PE+
Sbjct: 177 SKDADHSIEVVVGPEA 192


>gi|283852438|ref|ZP_06369707.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283572176|gb|EFC20167.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 129

 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+  + E     + VVDE  +L G++T+ D+    HK   T  + D+M  +   +  
Sbjct: 20  LADAVAAMQELFIRHIPVVDEAGRLAGLVTQRDLLSLEHKKDPTTPLRDIMRSDVATVSP 79

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           DT L  A + +  +    L VV +    +GI+   D L+  I
Sbjct: 80  DTPLRAAAETMIYNKYGCLPVV-EAGGLVGIITETDFLKLAI 120


>gi|225016740|ref|ZP_03705932.1| hypothetical protein CLOSTMETH_00652 [Clostridium methylpentosum
           DSM 5476]
 gi|224950408|gb|EEG31617.1| hypothetical protein CLOSTMETH_00652 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++   +   V +V+EG KL GIIT  D+   F  D N + + +VM  NP V     
Sbjct: 125 DADKLMGNFKISGVPIVEEGGKLVGIITNRDL--RFLTDYN-VPIREVMTCNPLVTAPVG 181

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  +L +H I  L +VDD     G++   D+
Sbjct: 182 TTLEQAQAILSKHKIEKLPLVDDEGYLKGLITIKDI 217


>gi|170761168|ref|YP_001786733.1| RpiR family transcriptional regulator [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408157|gb|ACA56568.1| transcriptional regulator, RpiR family [Clostridium botulinum A3
           str. Loch Maree]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|170759019|ref|YP_001788612.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A3
           str. Loch Maree]
 gi|169406008|gb|ACA54419.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A3
           str. Loch Maree]
          Length = 484

 Score = 42.7 bits (99), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++S  R   V +  EG KL GIIT  DI    N+ K +  +  ++ +I  P    E
Sbjct: 108 DALNLMSRYRISGVPITIEG-KLVGIITNRDILFENNYEKKIEEVMTKENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A  +L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|153938806|ref|YP_001390707.1| RpiR family transcriptional regulator [Clostridium botulinum F str.
           Langeland]
 gi|152934702|gb|ABS40200.1| transcriptional regulator, RpiR family [Clostridium botulinum F
           str. Langeland]
 gi|295318781|gb|ADF99158.1| transcriptional regulator, RpiR family [Clostridium botulinum F
           str. 230613]
          Length = 281

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|330683989|gb|EGG95749.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU121]
          Length = 182

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V + G G+SG I +  A  L   G  S+ V            I+ +DL I++S SGS++
Sbjct: 38  QVFVAGKGRSGFIANSFAMRLNQLGKVSYVVGETTTPS-----ISSNDLFIIISGSGSTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            L+ +   A      +  IT+++ + +   AD+ + LP
Sbjct: 93  HLRILAEKADSIGTTIALITTKSNTKIGQLADLTVVLP 130


>gi|327438155|dbj|BAK14520.1| IMP dehydrogenase/GMP reductase [Solibacillus silvestris StLB046]
          Length = 488

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V+  E QKL GIIT  D+   F  D  +L ++DVM K   +I
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNMEDQKLVGIITNRDL--RFISDY-SLKIDDVMTKEDLII 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L +VD+  K  G++   D+
Sbjct: 165 APVGTTLEDAEKILQQYKIEKLPLVDEAGKLTGLITIKDI 204


>gi|332717176|ref|YP_004444642.1| transcriptional regulator, RpiR family [Agrobacterium sp. H13-3]
 gi|325063861|gb|ADY67551.1| transcriptional regulator, RpiR family [Agrobacterium sp. H13-3]
          Length = 271

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFF 95
           G SSLE  L+   + Q   AV  +   + R V I G+ +S  I S LA        P+  
Sbjct: 117 GRSSLEMLLKSVDTRQLDEAVSALA--QARTVHIIGLRRSFPIASYLAYAFEKMKVPAV- 173

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           +H+A    G+L  I+RDD +I +++S  S E   +   AR   IP++A++
Sbjct: 174 LHSAVGGLGNLSAISRDDALIAITFSPYSAETLELAEMARANGIPVVAMS 223


>gi|297159505|gb|ADI09217.1| hypothetical protein SBI_06097 [Streptomyces bingchenggensis BCW-1]
          Length = 138

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 7/120 (5%)

Query: 220 ASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-- 276
           A+D+MH G   IP  +    +  A  ++ +   G + + DE ++L GI+T+ DI      
Sbjct: 4   AADIMHPGAQWIPKSQT---VDRAAQLMRDLNVGALPIADENERLCGILTDRDIVVGCVA 60

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             KD +  +  ++    P+ I  D  ++  ++ + Q+ I  L V+D  ++ +GI+   DL
Sbjct: 61  EGKDCSRTTAGELAKGTPRWIPADADVSDVLREMEQNKIRRLPVIDKNKRLVGIISEADL 120


>gi|308066920|ref|YP_003868525.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Paenibacillus polymyxa E681]
 gi|171704677|gb|ACB54657.1| inosine 5' monophosphate dehydrogenase [Paenibacillus polymyxa]
 gi|305856199|gb|ADM67987.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Paenibacillus polymyxa E681]
          Length = 485

 Score = 42.7 bits (99), Expect = 0.090,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ + R   V VV+E  KL GIIT  D+   F  D N L + +VM K   V     
Sbjct: 110 DAEAVMGKYRISGVPVVNEENKLVGIITNRDL--RFIHDFN-LKISEVMTKEELVTAPVG 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  +L++H I  L +VDD     G++   D+
Sbjct: 167 TTLQEAEVILQKHKIEKLPLVDDENYLKGLITIKDI 202


>gi|170757416|ref|YP_001780998.1| RpiR family transcriptional regulator [Clostridium botulinum B1
           str. Okra]
 gi|169122628|gb|ACA46464.1| transcriptional regulator, RpiR family [Clostridium botulinum B1
           str. Okra]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
 gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
          Length = 155

 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 30/128 (23%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------------------- 275
           L +A+ IL+EKRF  + VVD+  +L G+I+E D+                          
Sbjct: 22  LSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQETGVEAPPYIMLLDSVIYLQNPS 81

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGI 329
                 HK L   +V +VM   P  I  D  L  A  L+   ++  L V+ ++  K IGI
Sbjct: 82  RHEKLLHKALGQ-TVGEVMTDKPISITADRPLKEAASLMYDRHVRRLPVIEEETHKVIGI 140

Query: 330 VHFLDLLR 337
           +   D++R
Sbjct: 141 ITRGDIIR 148



 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D+M  NP  +  +T L+ A+++L +   S L VVDD  + IG++   DL+
Sbjct: 2   TKTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56


>gi|153837615|ref|ZP_01990282.1| CBS domain pair protein [Vibrio parahaemolyticus AQ3810]
 gi|149749007|gb|EDM59826.1| CBS domain pair protein [Vibrio parahaemolyticus AQ3810]
          Length = 309

 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 49/81 (60%), Gaps = 3/81 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-LSVEDVMIKNPKVILED 299
           A T+  ++R  C  V+ EG+ + G++T+ D+ ++   +D++T   + DVM  NP +I +D
Sbjct: 179 AQTMCGKQRSSCAVVMKEGEII-GLVTDRDMTKSVVAQDMDTNQPIADVMTPNPVLIEDD 237

Query: 300 TLLTVAMQLLRQHNISVLMVV 320
             +  A+ L+ Q+NI  L VV
Sbjct: 238 AKVIQAISLMLQYNIRCLPVV 258


>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
 gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
          Length = 155

 Score = 42.4 bits (98), Expect = 0.092,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 30/134 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           VK   PL DAI +L+E R   + V+D+ +KL G+I++ D+                    
Sbjct: 16  VKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLMWQESGVDTPPYVMLLDSII 75

Query: 274 ---------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DC 323
                    R  HK L   +V +VM   P  IL    L  A  L+ +  I  L V++ + 
Sbjct: 76  YLQNPARHERELHKALGQ-TVGEVMNDVPISILPTQTLREAAHLMNEKKIRRLPVLNVES 134

Query: 324 QKAIGIVHFLDLLR 337
           ++ IGI+   D++R
Sbjct: 135 RQLIGILTQGDIIR 148



 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 34/53 (64%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V +VM  NP  +  DT L  A++LL ++ IS + V+DD +K +G++   DL+
Sbjct: 4   TVGEVMTPNPITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLM 56


>gi|314934367|ref|ZP_07841726.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus caprae C87]
 gi|313652297|gb|EFS16060.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus caprae C87]
          Length = 293

 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L      D ++ ++ +G   E
Sbjct: 135 IFIYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP++ ITS N + VA  +DIVL+  +  E+    +  TTS   Q+   
Sbjct: 195 MRSIAKVVSDYHIPVVTITSTNDNPVANRSDIVLSYGQTDEN-EMRMGATTSLFAQMFTI 253

Query: 187 DAL 189
           D L
Sbjct: 254 DVL 256


>gi|296445884|ref|ZP_06887835.1| inosine-5'-monophosphate dehydrogenase [Methylosinus trichosporium
           OB3b]
 gi|296256552|gb|EFH03628.1| inosine-5'-monophosphate dehydrogenase [Methylosinus trichosporium
           OB3b]
          Length = 497

 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++S      + VV+ G      +L GI+T  D+   F  D+ T  V ++M +  
Sbjct: 110 LADALALMSRYSISGIPVVERGHGERPGRLVGILTNRDV--RF-ADVMTQPVAELMTRQL 166

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL QH I  L+VVD+  + +G+V   D+
Sbjct: 167 ITVREGVDQDEARRLLHQHRIEKLLVVDEDYRCVGLVTVKDI 208


>gi|328676746|gb|AEB27616.1| Inosine-5'-monophosphate dehydrogenase [Francisella cf. novicida
           Fx1]
          Length = 486

 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 141



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 110 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPREKLVTVPEDA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 167 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|295703018|ref|YP_003596093.1| helix-turn-helix domain, rpiR family protein [Bacillus megaterium
           DSM 319]
 gi|294800677|gb|ADF37743.1| helix-turn-helix domain, rpiR family protein [Bacillus megaterium
           DSM 319]
          Length = 284

 Score = 42.4 bits (98), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 1/84 (1%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           ++DD+++ +S+SG + E+  +L  A+   +  I++T   +S V+  ADI L      E  
Sbjct: 176 SKDDVVVGISFSGETPEVSNVLSLAKNRGVKTISLTKYGQSTVSSLADICLYTSYSQE-A 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIAL 193
           P   A T+S + QL + D L +++
Sbjct: 235 PFRSAATSSRLAQLYVIDVLFLSI 258


>gi|226305422|ref|YP_002765380.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           PR4]
 gi|226184537|dbj|BAH32641.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           PR4]
          Length = 507

 Score = 42.4 bits (98), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V D+  +L GI+T  D+   F  D N   VE +M K P +  ++ +   VA+ L
Sbjct: 131 RISGLPVTDDAGQLVGIVTNRDM--RFEVDQNRPVVE-IMTKMPLITAQEGVTADVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGNGKLTGLITVKDFVK 216


>gi|29349009|ref|NP_812512.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253571154|ref|ZP_04848561.1| glucosamine-fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_6]
 gi|298386717|ref|ZP_06996272.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_14]
 gi|29340916|gb|AAO78706.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251839107|gb|EES67191.1| glucosamine-fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_6]
 gi|298260391|gb|EFI03260.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_14]
          Length = 349

 Score = 42.4 bits (98), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 37/62 (59%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            +++TG+G S  I +  AS L S   P++ ++A E  H  + +I+ + LII +S SG S 
Sbjct: 45  NILLTGMGSSYFIANATASLLNSYKIPAYALNAGELLHYQISLISPESLIICISQSGESY 104

Query: 126 EL 127
           E+
Sbjct: 105 EV 106


>gi|312621454|ref|YP_004023067.1| signal transduction protein with cbs domains [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201921|gb|ADQ45248.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 123

 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K      ++
Sbjct: 22  ALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKAVITASQN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    +LLR+H+IS + VVD+  K IG++   D++ + I
Sbjct: 82  DDIKQVAKLLREHDISAVPVVDNG-KVIGLIGLEDIVDYFI 121


>gi|40074228|gb|AAR39393.1| 6-phospho-3-hexuloisomerase [Bacillus methanolicus MGA3]
          Length = 184

 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 10/148 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V + G G+SG +    A  +   G  ++ V      + +     ++D++I+ S SG + 
Sbjct: 38  KVFVAGAGRSGFMAKSFAMRMMHMGIDAYVVGETVTPNYE-----KEDILIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE---SCPHGLAPTTSAIMQ 182
            L ++   A+     + A+T   +S +   ADIV+ +P  P+        + P  S   Q
Sbjct: 93  SLVSMAQKAKSIGGTIAAVTINPESTIGQLADIVIKMPGSPKDKSEARETIQPMGSLFEQ 152

Query: 183 --LAIGDALAIALLESRNFSENDFYVLH 208
             L   DA+ +  +E +       Y  H
Sbjct: 153 TLLLFYDAVILRFMEKKGLDTKTMYGRH 180


>gi|56750577|ref|YP_171278.1| polyA polymerase [Synechococcus elongatus PCC 6301]
 gi|56685536|dbj|BAD78758.1| similar to polyA polymerase [Synechococcus elongatus PCC 6301]
          Length = 909

 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+M S   +  V+    + +A  IL       ++VVDE  +L GII+  D+    H
Sbjct: 315 LLARDLMSS--PVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDLDLALH 372

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+  M  +PK I  +T L     L+  ++I  L V+D  Q  +GIV   D+LR
Sbjct: 373 HGFGHAPVKGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLDRNQ-LVGIVTRTDVLR 431


>gi|15597051|ref|NP_250545.1| hypothetical protein PA1854 [Pseudomonas aeruginosa PAO1]
 gi|107101287|ref|ZP_01365205.1| hypothetical protein PaerPA_01002321 [Pseudomonas aeruginosa PACS2]
 gi|218892189|ref|YP_002441056.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa LESB58]
 gi|254234949|ref|ZP_04928272.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|9947842|gb|AAG05243.1|AE004611_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126166880|gb|EAZ52391.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|218772415|emb|CAW28197.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa LESB58]
          Length = 385

 Score = 42.4 bits (98), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L E R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQEHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|52548942|gb|AAU82791.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
           GZfos1C11]
          Length = 134

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            P+ + + IL  K    +AV     +  G+I+E DI +   KD ++L+ EDVM    + I
Sbjct: 27  TPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKFMDKDWDSLTAEDVMSHFVRAI 86

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLR 337
             +T L  A   +++ NI  L+V+         IGI+   D+LR
Sbjct: 87  DPETTLRKAADTMKELNIHRLLVLSLSPAPGVPIGILSASDILR 130


>gi|81299785|ref|YP_399993.1| CBS [Synechococcus elongatus PCC 7942]
 gi|81168666|gb|ABB57006.1| CBS [Synechococcus elongatus PCC 7942]
          Length = 909

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+M S   +  V+    + +A  IL       ++VVDE  +L GII+  D+    H
Sbjct: 315 LLARDLMSS--PVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDLDLALH 372

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+  M  +PK I  +T L     L+  ++I  L V+D  Q  +GIV   D+LR
Sbjct: 373 HGFGHAPVKGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLDRNQ-LVGIVTRTDVLR 431


>gi|321313843|ref|YP_004206130.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis BSn5]
 gi|320020117|gb|ADV95103.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis BSn5]
          Length = 304

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 23/136 (16%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAE- 100
           CA E  +   GR++ TG G SG +G   A     T             G P  F+ AAE 
Sbjct: 58  CAYESFQN-GGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPKAFLQAAEG 116

Query: 101 ------ASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                 A   DL  I  T +D +I ++ SG +      L YAR+     IA+T    S +
Sbjct: 117 IEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAI 176

Query: 153 ACHADIVLTLPKEPES 168
           +  AD  + +   PE+
Sbjct: 177 SKDADHSIEVVVGPEA 192


>gi|291482545|dbj|BAI83620.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 304

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 23/136 (16%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAE- 100
           CA E  +   GR++ TG G SG +G   A     T             G P  F+ AAE 
Sbjct: 58  CAYESFQN-GGRLIYTGAGTSGRLGVMDAVECPPTYSVSPAQVIGIMAGGPEAFLQAAEG 116

Query: 101 ------ASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                 A   DL  I  T +D +I ++ SG +      L YAR+     IA+T    S +
Sbjct: 117 IEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAI 176

Query: 153 ACHADIVLTLPKEPES 168
           +  AD  + +   PE+
Sbjct: 177 SKDADHSIEVVVGPEA 192


>gi|229161241|ref|ZP_04289228.1| RpiR family transcriptional regulator [Bacillus cereus R309803]
 gi|228622337|gb|EEK79176.1| RpiR family transcriptional regulator [Bacillus cereus R309803]
          Length = 284

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 76/158 (48%), Gaps = 13/158 (8%)

Query: 43  SSLQGELSFQFHCAVEK-IKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           + LQ  L      A+E+ I+A++   R+   G G SG I          TG       A 
Sbjct: 109 TGLQDTLHLLNETALEQAIRALQEASRIEFYGNGGSGIIAMDAYHKFMRTGISCI---AH 165

Query: 100 EASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             SH  +   G++T++ ++I +S SGS+  L   L  A++    +IAITS  KS ++  A
Sbjct: 166 TDSHFQIMGAGLLTKEAVVIAISHSGSNKGLLEALEVAKKRGARIIAITSYQKSALSQLA 225

Query: 157 DIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           DI L T  +E E        ++S + QL++ D L + L
Sbjct: 226 DITLYTSTRETEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|154684527|ref|YP_001419688.1| inosine 5'-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           FZB42]
 gi|154350378|gb|ABS72457.1| GuaB [Bacillus amyloliquefaciens FZB42]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  + QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 ASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|50413518|ref|XP_457275.1| DEHA2B07282p [Debaryomyces hansenii CBS767]
 gi|49652940|emb|CAG85276.1| DEHA2B07282p [Debaryomyces hansenii]
          Length = 339

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDVMI 290
           +  P+ID I +L++K    V +VDE  KL  +    D+        + DL  LSV D ++
Sbjct: 221 MDTPVIDVIHLLTQKSVSSVPIVDEQGKLINVYEAVDVLGLVKGGIYNDL-VLSVGDALL 279

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P+         L D L T+ M  +R+  +  L VV+D  K + ++   D+L +
Sbjct: 280 RRPEDFEGVHTCTLNDRLSTI-MDTIRKSRLHRLFVVNDEGKLVSVITLSDILNY 333


>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
 gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 223

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 18/128 (14%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------H 277
           D++  V+ G P  +   +L E     V VVDE  +  G+++E D+ +            H
Sbjct: 12  DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSAEH 71

Query: 278 KDLNTLSV--------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            + +  S           +M   P   LE   +  A +++ +H I  L+VVD   +  G+
Sbjct: 72  AEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGDGRLAGV 131

Query: 330 VHFLDLLR 337
           V   DLLR
Sbjct: 132 VSRSDLLR 139


>gi|1256138|dbj|BAA19504.1| YbbI [Bacillus subtilis]
          Length = 306

 Score = 42.4 bits (98), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 57/136 (41%), Gaps = 23/136 (16%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAE- 100
           CA E  +   GR++ TG G SG +G   A     T             G P  F+ AAE 
Sbjct: 75  CAYESFQN-GGRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPEAFLQAAEG 133

Query: 101 ------ASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                 A   DL  I  T +D +I ++ SG +      L YAR+     IA+T    S +
Sbjct: 134 IEDSEEAGAEDLRNIQLTSNDTVIAIAASGRTPYAAGALRYARKVGAHTIALTCNENSAI 193

Query: 153 ACHADIVLTLPKEPES 168
           +  AD  + +   PE+
Sbjct: 194 SKDADHSIEVVVGPEA 209


>gi|293375290|ref|ZP_06621572.1| CBS domain protein [Turicibacter sanguinis PC909]
 gi|325842557|ref|ZP_08167728.1| CBS domain protein [Turicibacter sp. HGF1]
 gi|292646046|gb|EFF64074.1| CBS domain protein [Turicibacter sanguinis PC909]
 gi|325489601|gb|EGC91965.1| CBS domain protein [Turicibacter sp. HGF1]
          Length = 153

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 53/99 (53%), Gaps = 2/99 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVI 296
           +++A  ++ +   G + V+DE  K+ G++T+ DI      D+  +S  +ED+M      I
Sbjct: 20  VLNASRLMKKHNVGSIPVIDENSKVIGLVTDRDIVIRVFADILPMSTKIEDIMTHPVYTI 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + + + +A+ L+    +  L VVD  QK +G++   DL
Sbjct: 80  EQHSEVGLAISLMADKQVRRLPVVDHDQKLVGMISLGDL 118


>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
 gi|281413032|ref|YP_003347111.1| hypothetical protein [Thermotoga naphthophila RKU-10]
 gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
 gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
          Length = 215

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           +A+ ++ + +   + V+ + +K+ GI+TE D+                H  L+ L +E++
Sbjct: 22  EALKLMKQNKIKRLIVMKD-EKIVGIVTEKDLLYASPSKATTLNIWELHYLLSKLKIEEI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KN   + E+  +  A +++ + +IS L VVDD  + +GI+   D+ +
Sbjct: 81  MTKNVVTVNENAPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFK 129



 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 18/41 (43%), Positives = 25/41 (60%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             P+ DA  I+ EK    + VVD+  +L GIIT+ DIF+ F
Sbjct: 91  NAPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVF 131



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+ D +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVMKD-EKIVGIVTEKDLL 53


>gi|148656616|ref|YP_001276821.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 427

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 22/126 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           V+   P+ + + +L ++      VVD   ++ GIIT+GD+      +L            
Sbjct: 132 VRPDTPVAEIVALLIDRALRSAPVVDAENRVIGIITDGDLLTRGATELPLALQRELSLAE 191

Query: 281 -----NTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 TL     +  D+M  NP  + E T L  A  ++    +  + VVD  Q+ +G+V
Sbjct: 192 RAATIETLATHRHTAADLMTPNPVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMV 251

Query: 331 HFLDLL 336
              DLL
Sbjct: 252 SRSDLL 257



 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 25/114 (21%), Positives = 54/114 (47%), Gaps = 13/114 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL------------- 283
            PL +A  +++++    + VVD  Q+L G+++  D+     + L                
Sbjct: 221 TPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVAEGLRQRPATPIRQPDGAPK 280

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V ++MI +   +  DT L   +  L + +   ++VVD  ++ +GI+   D++R
Sbjct: 281 TVGEIMITDVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDVMR 334


>gi|83814923|ref|YP_445619.1| inosine-5'-monophosphate dehydrogenase [Salinibacter ruber DSM
           13855]
 gi|83756317|gb|ABC44430.1| inosine-5'-monophosphate dehydrogenase [Salinibacter ruber DSM
           13855]
          Length = 508

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  +++    G + VVDE  KL GI+T  D+   F  D +T  + ++M  +  V + 
Sbjct: 120 VADARNMMAHYSIGGIPVVDESDKLVGIVTNRDV--RFELDGDT-PIREMMTADDLVTVP 176

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A+++L+ H +  L VVD+     G++ F D+ +
Sbjct: 177 VGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRK 216


>gi|45358579|ref|NP_988136.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|44921337|emb|CAF30572.1| Conserved Hypothetical protein with 4 CBS domains [Methanococcus
           maripaludis S2]
          Length = 413

 Score = 42.4 bits (98), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           VK+   +IDA   +         V+DE  KL GIIT+ D+ +   +   L  + ++ +M 
Sbjct: 73  VKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESELLKDVKIDKIMT 132

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+P  I  D  +  A  L+ ++NI  L+V+D   K IG+V   D+++
Sbjct: 133 KSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVK 179


>gi|76802799|ref|YP_330894.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558664|emb|CAI50256.1| CBS domain protein 6 [Natronomonas pharaonis DSM 2160]
          Length = 144

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA T L+E+  G + VV EGQ L+GIITE DI     ++L+  +    ++ +P V + 
Sbjct: 25  LADAATRLTEQSIGSL-VVGEGQ-LRGIITESDIVTAVSEELDPETPVTELMSDPVVTIR 82

Query: 299 DT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T  L  A + +  + +  L VV+    AIGI+   DL
Sbjct: 83  RTETLQAAAERMGHNGVKKLPVVEGG-SAIGIITTTDL 119


>gi|56708374|ref|YP_170270.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110670844|ref|YP_667401.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis FSC198]
 gi|118497257|ref|YP_898307.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           novicida U112]
 gi|134302359|ref|YP_001122328.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|194323559|ref|ZP_03057336.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida FTE]
 gi|208779050|ref|ZP_03246396.1| inosine-5'-monophosphate dehydrogenase [Francisella novicida FTG]
 gi|224457504|ref|ZP_03665977.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370997|ref|ZP_04987000.1| IMP dehydrogenase [Francisella tularensis subsp. tularensis FSC033]
 gi|254372630|ref|ZP_04988119.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida GA99-3549]
 gi|254374092|ref|ZP_04989574.1| IMP dehydrogenase [Francisella novicida GA99-3548]
 gi|254875197|ref|ZP_05247907.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|56604866|emb|CAG45950.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321177|emb|CAL09333.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis FSC198]
 gi|118423163|gb|ABK89553.1| IMP dehydrogenase/GMP reductase [Francisella novicida U112]
 gi|134050136|gb|ABO47207.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151569238|gb|EDN34892.1| IMP dehydrogenase [Francisella tularensis subsp. tularensis FSC033]
 gi|151570357|gb|EDN36011.1| inosine-5-monophosphate dehydrogenase [Francisella novicida
           GA99-3549]
 gi|151571812|gb|EDN37466.1| IMP dehydrogenase [Francisella novicida GA99-3548]
 gi|194322414|gb|EDX19895.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida FTE]
 gi|208744850|gb|EDZ91148.1| inosine-5'-monophosphate dehydrogenase [Francisella novicida FTG]
 gi|254841196|gb|EET19632.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|282159993|gb|ADA79384.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 486

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 141



 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 110 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPREKLVTVPEDA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 167 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|257888754|ref|ZP_05668407.1| transcriptional regulator [Enterococcus faecium 1,141,733]
 gi|257824808|gb|EEV51740.1| transcriptional regulator [Enterococcus faecium 1,141,733]
          Length = 283

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
              A++ +K  +  + + GIG S  +   L       G  + +V         L   T D
Sbjct: 120 LQVAIDHVKRAQN-IYLFGIGASSLVSYDLFHKFNRAGRRASYVFDVHIGLEMLSYATTD 178

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           D++I +++SG + E+     YA+   +PLI IT  +   +   AD VL +P
Sbjct: 179 DVVIAVTYSGHTKEVLLACEYAKENKVPLIVITRNDGPKIKNLADEVLLVP 229


>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
          Length = 154

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++E+  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAERSIGALLVMD-GANIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPTQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 127


>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
          Length = 154

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  + IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDDG-RLIGLVSIGDLVK 127


>gi|306821654|ref|ZP_07455252.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304550399|gb|EFM38392.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 387

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 32/56 (57%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + L VE+VMI+NPK I +D     AM+++ +  +  L +VDD     G+V   D+
Sbjct: 252 FDYLPVEEVMIRNPKFIHQDKTTREAMEMMHKSRVDTLFLVDDDNVLTGLVDVFDI 307


>gi|269200131|gb|ACZ28695.1| inosine monophosphate dehydrogenase [Bacillus amyloliquefaciens]
 gi|328551708|gb|AEB22200.1| inosine 5'-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           TA208]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  + QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 APVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|261855672|ref|YP_003262955.1| hypothetical protein Hneap_1072 [Halothiobacillus neapolitanus c2]
 gi|261836141|gb|ACX95908.1| CBS domain containing protein [Halothiobacillus neapolitanus c2]
          Length = 221

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPK 294
            P+ +   +++ ++ G V ++D  +KL GI+T+GD+ R   +  DL    V  +   N  
Sbjct: 107 APISEFRALITRRKIGLVPLIDAQKKLVGIVTKGDLTRQRVRFTDLAPRPVSTIGTPNVL 166

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +T +    ++L   +I  L +V+D    +G+V   D+LR
Sbjct: 167 TATTNTNIRELARVLLARDIRGLPIVNDIGDVVGVVTRGDILR 209


>gi|145591209|ref|YP_001153211.1| signal transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282977|gb|ABP50559.1| putative signal transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 139

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 4/100 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLK--GIITEGDIFRNF-HKDLNTLSVEDV-MIKNPKVI 296
           +A  ++++ R G + +VD+    K  G+I+E DI R    K   T +V+ V  ++N   +
Sbjct: 22  EAAALMAQHRVGLLVIVDKENPKKPIGVISERDIIRGIAQKTPLTATVDKVGTMRNFVYV 81

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   +T A + +RQHN+  ++VVD      G++   DL+
Sbjct: 82  YDYDPITAAARKMRQHNVRHVVVVDKEGNLYGVISIRDLI 121


>gi|229542142|ref|ZP_04431202.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
 gi|229326562|gb|EEN92237.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
          Length = 600

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 10/149 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S H   +G +L   LA        VH +     ++ +++   L I +S SG
Sbjct: 292 RLYIIACGTSYHAGLVGKQLIEKLAKIPVE---VHVSSEFVYNMPLLSEKPLFIFISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L   +      + +T+   S ++  AD  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVKVKELGYKTLTMTNVPGSTLSREADYTLLLHAGPEIA---VASTKAYTAQ 405

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A+   LA    +SR FSE DF ++H  G
Sbjct: 406 IAVLAILADVAAKSRGFSE-DFDLVHELG 433


>gi|326480461|gb|EGE04471.1| CBS and PB1 domain-containing protein [Trichophyton equinum CBS
           127.97]
          Length = 696

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    +++ ++M
Sbjct: 146 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEIM 205

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 206 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 246


>gi|283851978|ref|ZP_06369254.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
 gi|283572702|gb|EFC20686.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
          Length = 408

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 59/140 (42%), Gaps = 20/140 (14%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-- 273
           LF  A DVM +   +P      PL + +  L       V V+D  +K++GI+ +GD+   
Sbjct: 266 LFQQARDVMFT--DVPTAAPDTPLPEVVARLVASPLRRVVVIDADRKVRGIVLDGDLLGR 323

Query: 274 ------RNFHKDLNTLSVED----------VMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                     K L +   E+          VM  N   + EDT L   +Q +       L
Sbjct: 324 CGPERKPGLLKALFSFGREEAACPMGRASEVMQANVYTVSEDTPLMDVLQRMLTTRAKRL 383

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
           +VVDD  K +G+V    LLR
Sbjct: 384 VVVDDEGKLLGMVDRESLLR 403



 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 20/120 (16%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----------RNFHKD------- 279
           PL   + +L  +    V V+ E  K+ G++T GD+            +N   D       
Sbjct: 128 PLPKVVDLLLARGVKAVPVIGENGKVAGVVTGGDLLARGGMDTRLSLQNILPDDVRAGER 187

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  L+  DVM      I E   L  A Q++ +  +  L VVD+  + IGIV   D+LR
Sbjct: 188 ARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDEAGELIGIVSRADILR 247



 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 72/170 (42%), Gaps = 27/170 (15%)

Query: 186 GDALAIALLESR----NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG--CPL 239
           GD LA   +++R    N   +D   +  G +     + A DVM S    P V IG    L
Sbjct: 160 GDLLARGGMDTRLSLQNILPDD---VRAGERARMAGLTARDVMTS----PAVTIGERAGL 212

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------------VE 286
            +A  ++S K    + VVDE  +L GI++  DI R+   DL   +               
Sbjct: 213 REAAQVMSRKGLKRLPVVDEAGELIGIVSRADILRS-ASDLAPAAEALPRFTAGLFQQAR 271

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DVM  +      DT L   +  L    +  ++V+D  +K  GIV   DLL
Sbjct: 272 DVMFTDVPTAAPDTPLPEVVARLVASPLRRVVVIDADRKVRGIVLDGDLL 321


>gi|15668834|ref|NP_247637.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2496100|sp|Q58069|Y653_METJA RecName: Full=Uncharacterized protein MJ0653
 gi|1592300|gb|AAB98648.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 194

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 11/122 (9%)

Query: 221 SDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH 277
           S+VM    S P++K      + D   I++E   G V +V E  K  GI+TE DI  R   
Sbjct: 10  SEVM----SFPVIKATKNMSIYDIANIMTENNIGAVVIV-ENNKPIGIVTERDIVKRVVS 64

Query: 278 KDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K+L    V  E+VM K    I ++  +T A +++  H I  L VV D +  +GIV   D+
Sbjct: 65  KNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVVKDGE-LVGIVTQSDI 123

Query: 336 LR 337
           +R
Sbjct: 124 VR 125


>gi|237653739|ref|YP_002890053.1| hypothetical protein Tmz1t_3078 [Thauera sp. MZ1T]
 gi|237624986|gb|ACR01676.1| CBS domain containing protein [Thauera sp. MZ1T]
          Length = 149

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 55/103 (53%), Gaps = 5/103 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPK 294
           P+ +A+ I++E+  G + V   G+ + G++T   + +   +   D  +L VE VM++ P+
Sbjct: 22  PIAEAVEIMNEQDVGSLVVFSRGE-MVGMLTFRQVLQAVQQGGADWQSLQVEAVMLREPR 80

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V   D  +    +L+ +H+   L V+ D    +G+V F D+ +
Sbjct: 81  VAAPDMEMDELRRLMVEHHQRYLPVM-DGNTLLGVVSFHDVAK 122


>gi|119871769|ref|YP_929776.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673177|gb|ABL87433.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 140

 Score = 42.4 bits (98), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V  G  L +A+ I++    G V +VD+ ++  G+++E D+ R     K LNT   E   I
Sbjct: 16  VPPGTTLKEAVEIMARNNIGLVVIVDQSRRPIGVLSERDVIRALAAGKSLNTPVEEVGTI 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            N   + +D  +  A++ +R   I  ++VV++     G++   D++
Sbjct: 76  GNLLTVRKDDDIYTAVKAMRSRGIRHIIVVNEDGTIAGVLSIRDIV 121


>gi|322835715|ref|YP_004215741.1| RpiR family transcriptional regulator [Rahnella sp. Y9602]
 gi|321170916|gb|ADW76614.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 302

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V + G+  SG +        +  G P+  ++ +  +  + L  + R D++I+++   + 
Sbjct: 144 QVAVFGLNASGILADYSTRLFSRIGIPAVSLNRSGIALAEQLINLQRGDVLIMMAQKSAH 203

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
            E +  +  A+R +IPLI +T+ + S  A  ADIV+ +P+  E+
Sbjct: 204 REGRTAIQEAKRLNIPLILLTNASDSFFAKQADIVINVPRGGEN 247


>gi|319938514|ref|ZP_08012907.1| hypothetical protein HMPREF9488_03743 [Coprobacillus sp. 29_1]
 gi|319806278|gb|EFW02954.1| hypothetical protein HMPREF9488_03743 [Coprobacillus sp. 29_1]
          Length = 279

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 2/127 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + GIG SG +       L   G  S +          +  + +DDL   +S+SG + E
Sbjct: 131 IYLFGIGGSGTVCEDFQHKLLRIGKTSIYYADTHLQLTVVPNMQKDDLAFFISYSGKTKE 190

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +     +A+   +  +AIT    + +   AD+V+T+P E +    G   T+S +  L + 
Sbjct: 191 IVTAAKWAKHMGMKSVAITQSAYNDLGKLADMVITIPIEEKELRIG--ATSSRLSSLIVI 248

Query: 187 DALAIAL 193
           D L  A+
Sbjct: 249 DLLYYAI 255


>gi|311029634|ref|ZP_07707724.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family protein [Bacillus sp. m3-13]
          Length = 582

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 59/109 (54%), Gaps = 2/109 (1%)

Query: 230 IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVED 287
           IP  +K    L +A+ I+ E+++G + VV+E  KL G+ T   +F+   ++   + S++D
Sbjct: 11  IPYQIKEDTTLEEALNIMKEEKYGLLPVVNEDGKLMGVFTRSKLFQMVKQEKPLITSIKD 70

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + K+   + E+T      +++R  ++   +VVD   + +G+    D++
Sbjct: 71  FVKKDVYSLKENTPYKELEEIVRNSSVGTGVVVDAENRVLGLFTKADMV 119


>gi|89256767|ref|YP_514129.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica LVS]
 gi|115315158|ref|YP_763881.1| IMP dehydrogenase [Francisella tularensis subsp. holarctica OSU18]
 gi|156502929|ref|YP_001428994.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|167010908|ref|ZP_02275839.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FSC200]
 gi|254368058|ref|ZP_04984078.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica 257]
 gi|254369658|ref|ZP_04985668.1| hypothetical protein FTAG_00976 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954455|ref|ZP_06559076.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312117|ref|ZP_06802928.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89144598|emb|CAJ79917.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica LVS]
 gi|115130057|gb|ABI83244.1| IMP dehydrogenase [Francisella tularensis subsp. holarctica OSU18]
 gi|134253868|gb|EBA52962.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica 257]
 gi|156253532|gb|ABU62038.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|157122617|gb|EDO66746.1| hypothetical protein FTAG_00976 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 486

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 141



 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 110 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPREKLVTVPEDA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 167 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|330835092|ref|YP_004409820.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567231|gb|AEB95336.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 164

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 52/108 (48%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           I +V+    ++ A T +     G + VVD   ++ GI+TE D+ R          V+D M
Sbjct: 13  IRVVREEDTIVSAATEMKNHNIGSMLVVDNQGQIVGIVTERDVVRAMADRRLDGKVKDYM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + K + E+T +  A+ ++ ++    L V+    K IGIV   DL R
Sbjct: 73  TSSVKGVTEETSVEEAVGIMLENGFRHLPVIGKEGKVIGIVSIRDLAR 120


>gi|325958962|ref|YP_004290428.1| Homoserine O-acetyltransferase [Methanobacterium sp. AL-21]
 gi|325330394|gb|ADZ09456.1| Homoserine O-acetyltransferase [Methanobacterium sp. AL-21]
          Length = 489

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM      P +K    +  A  ++  ++   + VV +   L GI+T  DI ++  ++  
Sbjct: 373 DVM--AKEFPKIKEKSSIEHAAELMLHEKVTHLPVVTDNSTLLGIVTAWDISKSVARNYK 430

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            L  +D+M K   V+  +  + +A + +++++IS L VVD+ +  IGIV
Sbjct: 431 EL--DDIMTKEVIVVSPEDPIELAARKMKKYSISSLPVVDESETVIGIV 477


>gi|224283870|ref|ZP_03647192.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
 gi|311064747|ref|YP_003971472.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           PRL2010]
 gi|310867066|gb|ADP36435.1| GuaB Inosine-5'-monophosphate dehydrogenase [Bifidobacterium
           bifidum PRL2010]
          Length = 506

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 47/211 (22%)

Query: 157 DIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLES------- 196
           D VL LP E +  P  +              PT SA M       +AIA+  +       
Sbjct: 19  DDVLLLPNETDVIPSEVDTTTHLTREITMKVPTISAAMDTVTESEMAIAMARNGGIGVLH 78

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS----IPL-VKIGCPLIDAITILSEKRF 251
           RN S +D                  DV+   +S     PL V     L D   +  +   
Sbjct: 79  RNLSIDDQ-------------AAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHI 125

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAM 306
             + VVD+  +L GIIT  D+     +D + L V+DVM K      P  I +D     A 
Sbjct: 126 SGLPVVDKENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDD----AH 181

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +LL QH +  L ++DD  K  G++   D ++
Sbjct: 182 RLLAQHKVEKLPLIDDNGKLAGLITVKDFVK 212


>gi|326802798|ref|YP_004320616.1| transcriptional regulator, RpiR family [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650468|gb|AEA00651.1| transcriptional regulator, RpiR family [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 290

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 7/154 (4%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  A+ KI + K RV I GIG S  +     S L   G P+ +          +   T D
Sbjct: 129 FEEAITKIISAK-RVSIYGIGTSSSVALDFVSRLIRIGIPATYYSDIHLQQLAVHSYTED 187

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL+I +S SG++ +    L  A+   +  IA+T+     +  +ADI L L  + E+  + 
Sbjct: 188 DLLIGISHSGATMDAVDTLKLAKSRGVQTIALTNYKSHFINEYADISL-LTGDNETSLYS 246

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                S I  L + D L I ++     S+ D Y 
Sbjct: 247 -ETMVSRISLLTLIDMLYIGII----LSDYDHYT 275


>gi|188025435|ref|ZP_02958590.2| hypothetical protein PROSTU_00338 [Providencia stuartii ATCC 25827]
 gi|188023760|gb|EDU61800.1| hypothetical protein PROSTU_00338 [Providencia stuartii ATCC 25827]
          Length = 343

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 6/185 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI--KGRVVITGIG 73
           H+ + N   Q     ++A+K  L    S  +      F    + + AI    RV I GIG
Sbjct: 142 HTALHNRITQNDNLMVVAQKLALEKNYSITETTRHIDFKLFEKIVDAIDKSQRVQIVGIG 201

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG     L+  L   G  +               +T  D  IV+S++G   ++      
Sbjct: 202 GSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTLTPQDTQIVISFTGKRKDMLTAASI 261

Query: 134 ARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           AR+    +IAIT    S +A  AD VL ++ +E E     ++  T+   Q  + D L +A
Sbjct: 262 ARKQGANVIAITRSRLSPLAQLADYVLESIAEENEWRSSSISSRTA---QNTLTDLLFMA 318

Query: 193 LLESR 197
           LL+ R
Sbjct: 319 LLQKR 323


>gi|126466196|ref|YP_001041305.1| signal transduction protein [Staphylothermus marinus F1]
 gi|126015019|gb|ABN70397.1| putative signal transduction protein with CBS domains
           [Staphylothermus marinus F1]
          Length = 316

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 68/134 (50%), Gaps = 20/134 (14%)

Query: 218 VCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V  +DVM S    P+V I  G P+ +A+  + +  F  + VV E   L GIIT  DI + 
Sbjct: 181 VKVADVMSS----PVVTIESGRPIKEAMEKIIKYGFRRIPVVGENVVL-GIITAMDIIKY 235

Query: 276 F--HKDL-NTLS----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           F  H+   NT+S          V+D+M++   +I  D  L +A   + + N+   +VV+D
Sbjct: 236 FGTHEAFKNTVSGDIREALKIPVDDIMVRELVIIKPDDDLGLAAHKMAEKNVGSALVVND 295

Query: 323 CQKAIGIVHFLDLL 336
             + +GIV   D+L
Sbjct: 296 KMELLGIVTERDIL 309


>gi|209963502|ref|YP_002296417.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW]
 gi|209956968|gb|ACI97604.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW]
          Length = 496

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           L DA+ +++  R   + V D   +L GI+T  D+    N  + ++ L  +D ++     +
Sbjct: 115 LADALDLMARHRISGIPVTDAAGRLVGILTNRDVRFATNPQQPISELMTKDRLV----TV 170

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E      A +LL Q+ I  L+VVD+  + +G++   D+
Sbjct: 171 KEGVDRAEAKRLLHQYRIEKLLVVDEAYRCVGLITVKDI 209


>gi|295397624|ref|ZP_06807699.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Aerococcus viridans ATCC
           11563]
 gi|294974087|gb|EFG49839.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Aerococcus viridans ATCC
           11563]
          Length = 406

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 58/118 (49%), Gaps = 8/118 (6%)

Query: 215 TLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           T F+   ++M +    PL   +G  L  AITI+ +     + V+D+   LKG++T  D+ 
Sbjct: 246 TDFITVKEIMIT---TPLTATLGMSLGKAITIMRDNHVDSLFVIDDDHHLKGLLTLNDV- 301

Query: 274 RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +  NT LSV DVM  N + + ED L+      + +  I  + VVD   +  G+V
Sbjct: 302 --VSRGANTSLSVADVMHTNLRPVYEDALVQDTTTQILKGRIPNMPVVDRAGRLTGLV 357


>gi|19114942|ref|NP_594030.1| conserved protein (fungal and plant) [Schizosaccharomyces pombe
           972h-]
 gi|3183377|sp|O13965|MUG70_SCHPO RecName: Full=Meiotically up-regulated gene 70 protein
 gi|2330788|emb|CAB11262.1| conserved protein (fungal and plant) [Schizosaccharomyces pombe]
          Length = 730

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVMIKNPKV 295
           + +   +++ KR  CV VVD+ ++L GI+T  DI  R     LN     + D+M  +P  
Sbjct: 82  VTETAQLMAAKRQNCVLVVDDDEQLAGIVTATDIATRCVGAGLNARQTLIADIMSTSPLC 141

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I  DT    A+ L+ +H    L VV D
Sbjct: 142 ITSDTRFDDALLLMIEHKFRHLPVVSD 168


>gi|308171900|ref|YP_003918605.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604764|emb|CBI41135.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|328909968|gb|AEB61564.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           LL3]
          Length = 488

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  + QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 APVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|322805662|emb|CBZ03227.1| sialic acid utilization regulator, RpiR family [Clostridium
           botulinum H04402 065]
          Length = 281

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 10/138 (7%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
           +E +KAIK    + + G+G S  +       L        F    + SH  L +   IT 
Sbjct: 120 LEAVKAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMF---QQDSHLQLAVSVHITN 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +    
Sbjct: 177 RDVAVAISYSGNTREVNLAVEEAQKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRI 236

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    +S   QL + D+L
Sbjct: 237 G--AISSRTSQLFVTDSL 252


>gi|313110556|ref|ZP_07796441.1| putative CBS-domain-containing-containing membrane protein
           [Pseudomonas aeruginosa 39016]
 gi|310882943|gb|EFQ41537.1| putative CBS-domain-containing-containing membrane protein
           [Pseudomonas aeruginosa 39016]
          Length = 385

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L E R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQEHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|226355479|ref|YP_002785219.1| malate dehydrogenase [Deinococcus deserti VCD115]
 gi|226317469|gb|ACO45465.1| putative malate dehydrogenase [Deinococcus deserti VCD115]
          Length = 505

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 26/199 (13%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL  P+  +  PH ++             P  SA M       +A+A+       E  
Sbjct: 34  DDVLLQPRHSQVLPHEVSVEASLTRRIRLNIPFLSAAMDTVTETGMAVAMAR-----EGG 88

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDE 259
             V+H    +         V  S   + +  I  P    + DA  ++SE R   V V D 
Sbjct: 89  IGVIHKNMSIDAQAEMVRKVKRSESGMIVDPITLPPHATVADAERLMSEYRISGVPVTDP 148

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
             KL GIIT  D+   F  DL+   V DVM +   V +   T L  A ++ +++ I  L+
Sbjct: 149 SGKLLGIITNRDM--RFVDDLSA-RVGDVMTRENLVTVPVGTTLDEAHEMFKRNRIEKLL 205

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V D+     G++   DL +
Sbjct: 206 VTDEAGLLRGLITIKDLAK 224


>gi|171058157|ref|YP_001790506.1| CBS domain-containing protein [Leptothrix cholodnii SP-6]
 gi|170775602|gb|ACB33741.1| CBS domain containing membrane protein [Leptothrix cholodnii SP-6]
          Length = 390

 Score = 42.4 bits (98), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 31/61 (50%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + L+TL   D+M  +P  +   T L  A QLLR H I  L VVD     +GIV   D L
Sbjct: 235 RRRLDTLRCRDIMSADPLTVAFGTPLHEAWQLLRGHRIKALPVVDRYGFIVGIVTQADFL 294

Query: 337 R 337
           R
Sbjct: 295 R 295


>gi|332976772|gb|EGK13603.1| RpiR family transcriptional regulator [Desmospora sp. 8437]
          Length = 293

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 8/134 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT---RDDLIIVLSWSG 122
           RV+  G+G S              G  + F H     H  L +IT     D+ + +S SG
Sbjct: 144 RVLFFGVGGSAIAAVDSLYKFTKLGFQTEFNHDF---HYMLSLITHLNEKDVFVAISMSG 200

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + ++  ++ +A++    +IAIT+ +KS +   ADI L  P   +    G    TS + Q
Sbjct: 201 KTKDVMDLVQFAKKKGATVIAITNISKSPLYKQADIRLATPTVEKDFRSG--SITSRMTQ 258

Query: 183 LAIGDALAIALLES 196
           L + D L I+L  +
Sbjct: 259 LTVIDTLYISLFNT 272


>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
 gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
          Length = 215

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           +A+ ++ + +   + V+ +  ++ GI+TE D+                H  L+ L VE++
Sbjct: 22  EALKLMKQNKIKRLIVMKD-DRIVGIVTEKDLLYASPSKATTLNVWELHYLLSKLKVEEI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+   + E+T +  A +++ + +IS L VVDD  K +GI+   D+ +
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEERDISGLPVVDDAGKLVGIITQTDIFK 129



 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 26/44 (59%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    P+ DA  I+ E+    + VVD+  KL GIIT+ DIF+ F
Sbjct: 88  VNENTPIEDAARIMEERDISGLPVVDDAGKLVGIITQTDIFKVF 131



 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T    A++L++Q+ I  L+V+ D  + +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFNEALKLMKQNKIKRLIVMKD-DRIVGIVTEKDLL 53


>gi|254821003|ref|ZP_05226004.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 531

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVDE   L GIIT  D+   F  D  T  V +VM K P +  ++ +    A+ L
Sbjct: 153 RISGLPVVDESGALVGIITNRDM--RFEVD-QTKKVAEVMTKAPLITAQEGVSADAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   +  G++   D ++
Sbjct: 210 LRRHKIEKLPIVDGHGRLTGLITVKDFVK 238


>gi|238750380|ref|ZP_04611881.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           rohdei ATCC 43380]
 gi|238711311|gb|EEQ03528.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           rohdei ATCC 43380]
          Length = 280

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/139 (26%), Positives = 66/139 (47%), Gaps = 4/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV++TG+G SG +   LA  L   G  +       A    +  +   DL++V+S+ G   
Sbjct: 132 RVILTGLGASGLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDARDLLLVISFCGERR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A+R    ++A+TS   + +   AD  L T+ +EP      ++ +T+   Q A
Sbjct: 192 EINLAAEEAQRCGAKVLALTSFTPNSLQQRADHCLYTISEEPIIRNAAISSSTA---QYA 248

Query: 185 IGDALAIALLESRNFSEND 203
           + D L +A+++    S  D
Sbjct: 249 LTDLLFMAMIQQNLESAQD 267


>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
 gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
          Length = 205

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           DA+  ++    G + VV  G++  + GIITE D  R      +   +  V D+M +  K+
Sbjct: 82  DAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I    DT +  AMQL+    I  + V+DD +  IG+V   D++R
Sbjct: 142 ITVAHDTKVLKAMQLMTDRRIRHIPVIDD-KGMIGMVSIGDVVR 184


>gi|154501514|ref|ZP_02039215.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
           29799]
 gi|150269802|gb|EDM97342.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
           29799]
          Length = 491

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 58/103 (56%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  L +A  ++++ R   V + D G KL GIIT  D+   F  D++ L +++VM K+  V
Sbjct: 109 GHTLAEADELMAKYRISGVPICDNG-KLIGIITNRDM--KFETDMSQL-IDNVMTKDHLV 164

Query: 296 ILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++ + L  A ++LR+H I  L +VDD  +  G++   D+ +
Sbjct: 165 TAKEGITLEEAKEILRKHKIEKLPLVDDDFRLKGLITIKDIEK 207


>gi|296389753|ref|ZP_06879228.1| CBS domain-containing membrane protein [Pseudomonas aeruginosa
           PAb1]
          Length = 385

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L E R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQEHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|227552919|ref|ZP_03982968.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis HH22]
 gi|227177953|gb|EEI58925.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis HH22]
          Length = 161

 Score = 42.4 bits (98), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTLSVEDVM 289
           PL  A  +LS+ R+  + V+D+G +  G+I   D+          +F K LN  +V DVM
Sbjct: 32  PLSHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEK-LNEFTVADVM 90

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  VI E   L   + LL   + S L VVDD Q+  GI+   ++L+
Sbjct: 91  EVNVPVIGESWDLEEVLHLLV--DASFLPVVDDNQRFKGIITRKEILK 136


>gi|89901569|ref|YP_524040.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89346306|gb|ABD70509.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 146

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVIL 297
           DA  I+++   G + V+D    L+GI+TE D+  R   K LN  T    DVM +NP+ + 
Sbjct: 26  DAACIMTKANCGSILVIDAAGVLQGILTERDLMTRVLAKALNPQTTLASDVMTRNPQSVG 85

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D  +  A+ ++ +     L +++   K +G+    D +
Sbjct: 86  PDMRVADAVVIMIERGFRHLPIINTAGKILGVFSIRDAM 124


>gi|77359543|ref|YP_339118.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874454|emb|CAI85675.1| conserved protein of unknown function ; putative
           inosine-5'-monophosphate dehydrogenase (IMP
           dehydrogenase) [Pseudoalteromonas haloplanktis TAC125]
          Length = 612

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 249 KRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVA 305
           + +G  ++ + +   L G++T+ D+      D      SV  +M   PK I E+  +  A
Sbjct: 176 QEYGVSSIMITQDAHLVGVVTDRDLRNRVLADEVDPQQSVSSIMTAKPKFIFENNRVFSA 235

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L+ +HNI  + V+D+  K +G++   DLLR
Sbjct: 236 LHLMLKHNIHHIPVLDENHKPLGMITSTDLLR 267


>gi|320160311|ref|YP_004173535.1| putative sugar isomerase [Anaerolinea thermophila UNI-1]
 gi|319994164|dbj|BAJ62935.1| putative sugar isomerase [Anaerolinea thermophila UNI-1]
          Length = 338

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 4/97 (4%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV+TG+G S +    L   L   G  + +V   E  H     +  +DL++V+S SG S 
Sbjct: 41  RVVLTGMGSSLYALIPLWYRLLDAGIQTLWVETGELLHYGAEWVKPEDLLVVVSQSGRSA 100

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHAD-IVLT 161
           E+  ++   +R   P++ +T+  +S +A  A+ +VLT
Sbjct: 101 EVVELI---KRNPSPILGVTNTPESPLAQTAETLVLT 134


>gi|283852413|ref|ZP_06369682.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283572151|gb|EFC20142.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 220

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 60/119 (50%), Gaps = 18/119 (15%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLN 281
           K G  ++ A  ++ E  F  + V+D+  +L GI+++ DI                +  L+
Sbjct: 15  KPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V D+M K  KVI    +DT+   A+ +LR +N+S L VVD   K +G++   D+ +
Sbjct: 75  EIKVADIMTK--KVIFIGPDDTVEKAAVLMLR-NNVSGLPVVDGDSKVVGVITDSDIFK 130


>gi|183981158|ref|YP_001849449.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           marinum M]
 gi|183174484|gb|ACC39594.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           marinum M]
          Length = 532

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 156 RISGLPVVDDAGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 212

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L VVD   +  G++   D ++
Sbjct: 213 LRRHKIEKLPVVDGSGRLTGLITVKDFVK 241


>gi|126665485|ref|ZP_01736467.1| CBS domain protein [Marinobacter sp. ELB17]
 gi|126630113|gb|EBA00729.1| CBS domain protein [Marinobacter sp. ELB17]
          Length = 166

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 12/127 (9%)

Query: 212 KLGTLFVCA---SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           K   L +CA   SDVM   + I  ++ G PL   +  L E     + VVD  ++L G ++
Sbjct: 18  KCEELPMCALRVSDVM--SNHIAPIRCGTPLTKVVKALLENHISGLPVVDASRRLLGFVS 75

Query: 269 EGD-----IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           E D     +  N+H + + + V+DVM + P  I   T +    Q L      V  VVD  
Sbjct: 76  EQDCIHALLVSNYHCEGDPI-VDDVMFREPLSISPGTSIVDLAQKLGAGKPKVYPVVDQ- 133

Query: 324 QKAIGIV 330
            K +GIV
Sbjct: 134 GKLVGIV 140


>gi|115380677|ref|ZP_01467601.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362317|gb|EAU61628.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 344

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 16/191 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG----- 211
           D VL LP E    P  +  +T    QL +   L  A +++   S +   +   GG     
Sbjct: 49  DDVLLLPAESSVVPRDVELSTRLTRQLRLHIPLLSAAMDTVTESRSAIAMAQEGGIGVIH 108

Query: 212 -----KLGTLFVCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                +   L V       SG  +  V I  G PL  A+ ++       V V  +G++L 
Sbjct: 109 KNMTPEQQALEVLKVKKFESGMVVDPVTIEPGAPLARALELMRHHGVSGVPVT-QGRRLV 167

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T  D+   F  +L T  VE VM +      E      A  LL QH I  L++V++  
Sbjct: 168 GIVTSRDV--RFETNL-TQKVEQVMTRKLITGREGITQPEAQALLHQHRIEKLLIVNEEF 224

Query: 325 KAIGIVHFLDL 335
           +  G++   D+
Sbjct: 225 ELKGLITIKDI 235


>gi|62261188|gb|AAX77966.1| unknown protein [synthetic construct]
          Length = 521

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 64  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 115

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 116 ENGMVIDPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 167



 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 136 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPREKLVTVPEDA 192

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 193 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 229


>gi|29375708|ref|NP_814862.1| CBS domain-containing protein [Enterococcus faecalis V583]
 gi|229546188|ref|ZP_04434913.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX1322]
 gi|229550374|ref|ZP_04439099.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis ATCC 29200]
 gi|255973145|ref|ZP_05423731.1| predicted protein [Enterococcus faecalis T1]
 gi|255976188|ref|ZP_05426774.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256618716|ref|ZP_05475562.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256762140|ref|ZP_05502720.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256852782|ref|ZP_05558152.1| CBS domain-containing protein [Enterococcus faecalis T8]
 gi|256958629|ref|ZP_05562800.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256962272|ref|ZP_05566443.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256965467|ref|ZP_05569638.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|257078017|ref|ZP_05572378.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|257082905|ref|ZP_05577266.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
 gi|257085607|ref|ZP_05579968.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|257086487|ref|ZP_05580848.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|257089544|ref|ZP_05583905.1| predicted protein [Enterococcus faecalis CH188]
 gi|257415746|ref|ZP_05592740.1| CBS domain-containing protein [Enterococcus faecalis AR01/DG]
 gi|257418961|ref|ZP_05595955.1| predicted protein [Enterococcus faecalis T11]
 gi|257422951|ref|ZP_05599941.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|293383301|ref|ZP_06629216.1| CBS domain protein [Enterococcus faecalis R712]
 gi|293387542|ref|ZP_06632091.1| CBS domain protein [Enterococcus faecalis S613]
 gi|294781003|ref|ZP_06746355.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|300859853|ref|ZP_07105941.1| CBS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|307268754|ref|ZP_07550122.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|307273823|ref|ZP_07555045.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|307274565|ref|ZP_07555745.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|307278832|ref|ZP_07559895.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|307291115|ref|ZP_07571000.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|312899607|ref|ZP_07758933.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|312903665|ref|ZP_07762841.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|312905808|ref|ZP_07764828.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|312909137|ref|ZP_07767996.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|312951384|ref|ZP_07770282.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|29343169|gb|AAO80932.1| CBS domain protein [Enterococcus faecalis V583]
 gi|229304496|gb|EEN70492.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis ATCC 29200]
 gi|229308712|gb|EEN74699.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX1322]
 gi|255964163|gb|EET96639.1| predicted protein [Enterococcus faecalis T1]
 gi|255969060|gb|EET99682.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256598243|gb|EEU17419.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256683391|gb|EEU23086.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256711241|gb|EEU26279.1| CBS domain-containing protein [Enterococcus faecalis T8]
 gi|256949125|gb|EEU65757.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256952768|gb|EEU69400.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256955963|gb|EEU72595.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|256986047|gb|EEU73349.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|256990935|gb|EEU78237.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
 gi|256993637|gb|EEU80939.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|256994517|gb|EEU81819.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|256998356|gb|EEU84876.1| predicted protein [Enterococcus faecalis CH188]
 gi|257157574|gb|EEU87534.1| CBS domain-containing protein [Enterococcus faecalis ARO1/DG]
 gi|257160789|gb|EEU90749.1| predicted protein [Enterococcus faecalis T11]
 gi|257164775|gb|EEU94735.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|291079324|gb|EFE16688.1| CBS domain protein [Enterococcus faecalis R712]
 gi|291083052|gb|EFE20015.1| CBS domain protein [Enterococcus faecalis S613]
 gi|294451949|gb|EFG20399.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|300850671|gb|EFK78420.1| CBS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|306497769|gb|EFM67301.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|306504503|gb|EFM73710.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|306508717|gb|EFM77807.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|306509508|gb|EFM78556.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|306514882|gb|EFM83429.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|310628147|gb|EFQ11430.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|310630644|gb|EFQ13927.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|310633018|gb|EFQ16301.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|311290561|gb|EFQ69117.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|311293286|gb|EFQ71842.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|315028089|gb|EFT40021.1| CBS domain pair protein [Enterococcus faecalis TX2137]
 gi|315030702|gb|EFT42634.1| CBS domain pair protein [Enterococcus faecalis TX4000]
 gi|315031610|gb|EFT43542.1| CBS domain pair protein [Enterococcus faecalis TX0017]
 gi|315034947|gb|EFT46879.1| CBS domain pair protein [Enterococcus faecalis TX0027]
 gi|315144645|gb|EFT88661.1| CBS domain pair protein [Enterococcus faecalis TX2141]
 gi|315148469|gb|EFT92485.1| CBS domain pair protein [Enterococcus faecalis TX4244]
 gi|315150388|gb|EFT94404.1| CBS domain pair protein [Enterococcus faecalis TX0012]
 gi|315153655|gb|EFT97671.1| CBS domain pair protein [Enterococcus faecalis TX0031]
 gi|315156527|gb|EFU00544.1| CBS domain pair protein [Enterococcus faecalis TX0043]
 gi|315158353|gb|EFU02370.1| CBS domain pair protein [Enterococcus faecalis TX0312]
 gi|315160924|gb|EFU04941.1| CBS domain pair protein [Enterococcus faecalis TX0645]
 gi|315168400|gb|EFU12417.1| CBS domain pair protein [Enterococcus faecalis TX1341]
 gi|315170983|gb|EFU15000.1| CBS domain pair protein [Enterococcus faecalis TX1342]
 gi|315174651|gb|EFU18668.1| CBS domain pair protein [Enterococcus faecalis TX1346]
 gi|315573724|gb|EFU85915.1| CBS domain pair protein [Enterococcus faecalis TX0309B]
 gi|315577493|gb|EFU89684.1| CBS domain pair protein [Enterococcus faecalis TX0630]
 gi|315582661|gb|EFU94852.1| CBS domain pair protein [Enterococcus faecalis TX0309A]
 gi|323480371|gb|ADX79810.1| CBS domain family protein [Enterococcus faecalis 62]
 gi|327534763|gb|AEA93597.1| CBS domain protein [Enterococcus faecalis OG1RF]
 gi|329576377|gb|EGG57890.1| CBS domain protein [Enterococcus faecalis TX1467]
          Length = 162

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTLSVEDVM 289
           PL  A  +LS+ R+  + V+D+G +  G+I   D+          +F K LN  +V DVM
Sbjct: 32  PLSHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEK-LNEFTVADVM 90

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  VI E   L   + LL   + S L VVDD Q+  GI+   ++L+
Sbjct: 91  EVNVPVIGESWDLEEVLHLLV--DASFLPVVDDNQRFKGIITRKEILK 136


>gi|313141025|ref|ZP_07803218.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313133535|gb|EFR51152.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
          Length = 514

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 83/211 (39%), Gaps = 47/211 (22%)

Query: 157 DIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLES------- 196
           D VL LP E +  P  +              PT SA M       +AIA+  +       
Sbjct: 27  DDVLLLPNETDVIPSEVDTTTHLTREITMKVPTISAAMDTVTESEMAIAMARNGGIGVLH 86

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS----IPL-VKIGCPLIDAITILSEKRF 251
           RN S +D                  DV+   +S     PL V     L D   +  +   
Sbjct: 87  RNLSIDDQ-------------AAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHI 133

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAM 306
             + VVD+  +L GIIT  D+     +D + L V+DVM K      P  I +D     A 
Sbjct: 134 SGLPVVDKENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDD----AH 189

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +LL QH +  L ++DD  K  G++   D ++
Sbjct: 190 RLLAQHKVEKLPLIDDNGKLAGLITVKDFVK 220


>gi|260654557|ref|ZP_05860047.1| inosine-5'-monophosphate dehydrogenase [Jonquetella anthropi E3_33
           E1]
 gi|260630573|gb|EEX48767.1| inosine-5'-monophosphate dehydrogenase [Jonquetella anthropi E3_33
           E1]
          Length = 491

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           P+ DA+ ++S      V VVD   KL GIIT  D+    +F + ++ +  ++ +I  P  
Sbjct: 109 PVQDALDLMSHYHISGVPVVDHNMKLVGIITNRDLRFIDDFVQPISAVMTKEGLITAP-- 166

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             E T L  A ++LR   +  L +VD   K  G++   DL +
Sbjct: 167 --EGTTLADAEEILRHVKVEKLPLVDKNGKLKGLITIKDLQK 206


>gi|150401158|ref|YP_001324924.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013861|gb|ABR56312.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 132

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 10/112 (8%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           C L +A  ++  K    + V D   K+ G+++ GDI     K+ N L   D+M  N K I
Sbjct: 18  CTLAEAFNMMQNKGIKRIFVEDFNNKIVGVLSYGDIAEAIVKNSNELL--DIMANNIKNI 75

Query: 297 LEDTLLTV--------AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               +LT+          +++    +S L+V+DD    +G +   D+LR+ I
Sbjct: 76  SLKEVLTINENHDIKEGAKIMVHAGVSALLVIDDNNNFVGTISQTDILRYTI 127


>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
 gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
          Length = 148

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI     +  KD +T+ V +VM    +V+ 
Sbjct: 28  EAAQIMSQKNIGALPVVENGQ-VKGMITDRDITLRVSSQGKDPSTVKVAEVMTN--QVVT 84

Query: 298 EDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               ++V  A  ++ QH +  L +V++ Q   GIV   D+
Sbjct: 85  GTPNMSVQEAANVMAQHQVRRLPIVENNQLQ-GIVALGDI 123


>gi|294635155|ref|ZP_06713664.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
 gi|291091460|gb|EFE24021.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/130 (21%), Positives = 64/130 (49%), Gaps = 3/130 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H +++  +++     ++AEK  +++L++++      Q   A++ +   + R++I G+G S
Sbjct: 88  HGILRQDSLKLVGEKLMAEK--IAALQATMTINHEEQLQQALKMLLNAR-RIIIAGLGSS 144

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA+ L   G  ++    A         +   D+++ +S+SG   E+      AR
Sbjct: 145 GLVAKDLANKLMQIGMAAYAESDAHVQIACAHAMQPQDVLMAISYSGERKEVNTAAAMAR 204

Query: 136 RFSIPLIAIT 145
           R    ++A+T
Sbjct: 205 RCGAQVLALT 214


>gi|229489546|ref|ZP_04383409.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           SK121]
 gi|229323643|gb|EEN89401.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           SK121]
          Length = 507

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V D+  +L GI+T  D+   F  D N   V ++M K P +  ++ +   VA+ L
Sbjct: 131 RISGLPVTDDAGQLVGIVTNRDM--RFEVDQNR-PVAEIMTKMPLITAQEGVTADVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGNGKLTGLITVKDFVK 216


>gi|291457348|ref|ZP_06596738.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium breve DSM
           20213]
 gi|291381183|gb|EFE88701.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium breve DSM
           20213]
          Length = 517

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 94/243 (38%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRNIT 56

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 103

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+     +D
Sbjct: 104 KRSESGMITDPLTVNPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASED 163

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+DVM K      P  I +D     A +LL QH +  L +VD      G++   D
Sbjct: 164 YDTLKVKDVMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDAEGHLTGLITVKD 219

Query: 335 LLR 337
            ++
Sbjct: 220 FVK 222


>gi|159040894|ref|YP_001540146.1| sugar isomerase (SIS) [Caldivirga maquilingensis IC-167]
 gi|157919729|gb|ABW01156.1| sugar isomerase (SIS) [Caldivirga maquilingensis IC-167]
          Length = 206

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F   +EK+     +V++ G G+SG +    A  L   G  S+ +   E     +G    
Sbjct: 34  EFIDELEKLYHRGNKVLVVGAGRSGLVARGFAMRLMHLGYKSYVL--GETITPSVG---S 88

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            DL++ +S SG++  + A    A+R    ++AITS   S +A  AD+VL +P
Sbjct: 89  GDLVVAISGSGTTSIVVAAADAAKRMMAKVVAITSYPDSPLAKIADMVLVIP 140


>gi|152987254|ref|YP_001348798.1| hypothetical protein PSPA7_3439 [Pseudomonas aeruginosa PA7]
 gi|150962412|gb|ABR84437.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 385

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L E R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQEHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|70607570|ref|YP_256440.1| hypothetical protein Saci_1841 [Sulfolobus acidocaldarius DSM 639]
 gi|68568218|gb|AAY81147.1| conserved protein [Sulfolobus acidocaldarius DSM 639]
          Length = 515

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 8/127 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           KL +L    S V  S D+         L +AI  ++EK    + VVDE  ++ G+IT   
Sbjct: 384 KLSSLVNVTSTVFVSCDN--------TLREAILKINEKGVRALVVVDEEMRVIGLITVKT 435

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +      D + L V  V + + ++I ED  ++ A++  R+    V+ V+D  ++  G ++
Sbjct: 436 LLEISPDDYDRLRVCQVYLDDAEIIDEDYKVSDALRKFRESETPVIAVIDKRRRLKGTLY 495

Query: 332 FLDLLRF 338
             +LLRF
Sbjct: 496 ERELLRF 502


>gi|46190983|ref|ZP_00120794.2| COG0516: IMP dehydrogenase/GMP reductase [Bifidobacterium longum
           DJO10A]
          Length = 487

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLR 310
           VVD+  KL GIIT  D+     +D +TL V+DVM K      P  I +D     A +LL 
Sbjct: 110 VVDKENKLVGIITNRDMRFIASEDYDTLKVKDVMTKENLVTGPSNISKDD----AHRLLA 165

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           QH +  L +VD+     G++   D ++
Sbjct: 166 QHKVEKLPLVDEEGHLTGLITVKDFVK 192


>gi|332704228|ref|ZP_08424316.1| CBS domain containing protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332554377|gb|EGJ51421.1| CBS domain containing protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 142

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 16/100 (16%)

Query: 187 DALAIALLESRNFSENDFYV---LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           D LA AL  SR F++ D  +   +  G  L ++ +  +DV+       +V  GCP+  A 
Sbjct: 52  DVLAAAL--SR-FADVDMTIQEEIDAGIPLASIMI--TDVV-------VVSPGCPIRKAA 99

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            ++  ++ GC+ VV EGQKL GI+TE D  +   + L+ L
Sbjct: 100 DVMLTRKLGCLPVV-EGQKLVGILTEADFLKLVVELLDAL 138


>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
 gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
          Length = 149

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 11  SGRTIYTVTKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 70  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDDG-KLIGLVSIGDLVK 123


>gi|118616668|ref|YP_905000.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium ulcerans
           Agy99]
 gi|118568778|gb|ABL03529.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           ulcerans Agy99]
          Length = 532

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 156 RISGLPVVDDAGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 212

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L VVD   +  G++   D ++
Sbjct: 213 LRRHKIEKLPVVDGSGRLTGLITVKDFVK 241


>gi|20093529|ref|NP_613376.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19886367|gb|AAM01306.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 393

 Score = 42.0 bits (97), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI 296
           +++AIT + +     + VV++G+   G++TE DI     +  +L  +   +VM      I
Sbjct: 88  IVEAITEMIDSGLRALPVVEDGE-FVGLVTEYDIIDVARESDELTKIDAREVMSTPVITI 146

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E+  +  A  ++R H IS L VV+D  K  GIV   D++R
Sbjct: 147 HENDTIAKARAIMRDHGISRLPVVNDANKLRGIVTTTDIIR 187


>gi|304393083|ref|ZP_07375012.1| signal-transduction protein [Ahrensia sp. R2A130]
 gi|303294848|gb|EFL89219.1| signal-transduction protein [Ahrensia sp. R2A130]
          Length = 145

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 19/41 (46%), Positives = 27/41 (65%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           L DA TIL+++R G +  VDE  K+ GI++E DI +   KD
Sbjct: 23  LADAATILADRRIGAILAVDENGKMTGILSERDIIKFLAKD 63


>gi|295838476|ref|ZP_06825409.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB74]
 gi|295827009|gb|EFG65179.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB74]
          Length = 500

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V VVD   KL GI+T  D+   F  D  T  V +VM   P V  +
Sbjct: 113 LEEADAICAKFRISGVPVVDGAGKLLGIVTNRDMA--FETD-RTRKVREVMTPMPLVTGK 169

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM LLR+H I  L +VDD     G++   D ++
Sbjct: 170 VGISGVDAMALLRRHKIEKLPLVDDAGVLKGLITVKDFVK 209


>gi|326472832|gb|EGD96841.1| CBS and PB1 domain-containing protein [Trichophyton tonsurans CBS
           112818]
          Length = 659

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 3/101 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVE--DVM 289
           +K    + +A  +++ KR  CV V D+  ++ GI T  D+ +R     +    V   ++M
Sbjct: 104 IKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEIM 163

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KNP     DT  T A+ L+ +     L V+D+ Q   GI+
Sbjct: 164 TKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL 204


>gi|296270672|ref|YP_003653304.1| CBS domain-containing membrane protein [Thermobispora bispora DSM
           43833]
 gi|296093459|gb|ADG89411.1| CBS domain containing membrane protein [Thermobispora bispora DSM
           43833]
          Length = 217

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 18/122 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------ 274
           V+   PL+D +  L   R   V VVD  Q++ G++   D+                    
Sbjct: 16  VRPDTPLLDVVNALRRFRVDAVPVVDHEQRVTGMVCISDLLPKPGTRRINGGFFEVLGGG 75

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  N L+VE +M      + ED+ +   + L+ ++++  L VV    + +GIV  +D
Sbjct: 76  RLRRKANALTVEALMRTPAVTVTEDSTVQNVVALMEENHVDQLPVVQPDGRLVGIVRRID 135

Query: 335 LL 336
           LL
Sbjct: 136 LL 137


>gi|237729743|ref|ZP_04560224.1| transcriptional regulator [Citrobacter sp. 30_2]
 gi|226908349|gb|EEH94267.1| transcriptional regulator [Citrobacter sp. 30_2]
          Length = 274

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   + +D L++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNAATLNKDTLVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALL 194
             L + LL
Sbjct: 240 VMLLVELL 247


>gi|302557291|ref|ZP_07309633.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302474909|gb|EFL38002.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
          Length = 141

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHK 278
           DVM  G  +  V+    +++A  ++  +  G V V D GQ++ G++T+ DI         
Sbjct: 7   DVMTPG--VVAVRPDASVVEAAQLMRTQNIGDVVVAD-GQRIVGVLTDRDITVRAVAVAA 63

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D   LS  DV   NP  +  D  ++ A+ L+R+H I  + VV+     +G+V   DL
Sbjct: 64  DPLGLSAGDVCTPNPLTLAPDDPVSSAVALMREHAIRRIPVVEGGLP-VGLVSLGDL 119


>gi|39959|emb|CAA39204.1| IMP dehydrogenase [Bacillus subtilis]
          Length = 513

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V  +E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 ASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|148266098|ref|YP_001232804.1| nucleotidyl transferase [Geobacter uraniireducens Rf4]
 gi|146399598|gb|ABQ28231.1| Nucleotidyl transferase [Geobacter uraniireducens Rf4]
          Length = 351

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 60/116 (51%), Gaps = 4/116 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M++ +SI LV    P+I+AI I+ +       VVDE  KL G +T+GD+ R   K L   
Sbjct: 1   MNNWESI-LVSPETPIIEAIRIIDDSTLQIALVVDENHKLIGTLTDGDVRRAILKGLQLD 59

Query: 284 S-VEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V  VM  NP    L D+  ++ + ++R   I  + +VD      G+  F +L++
Sbjct: 60  NPVRQVMNTNPIAADLNDSRESI-LAIMRATKIRQIPIVDGQGIVAGLELFNNLIQ 114


>gi|332800116|ref|YP_004461615.1| inosine-5'-monophosphate dehydrogenase [Tepidanaerobacter sp. Re1]
 gi|332697851|gb|AEE92308.1| inosine-5'-monophosphate dehydrogenase [Tepidanaerobacter sp. Re1]
          Length = 482

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           DA+ ++   +   V +  EG+KL GI+T  D+   F  D  T  ++DVM K   V   E 
Sbjct: 108 DALELMERYKISGVPIT-EGKKLVGILTNRDL--RFEDD-TTKKIKDVMTKENLVTAPEG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  AM++L++H I  L +VD+     G++   D+ +
Sbjct: 164 TDLDGAMKILKKHKIEKLPIVDEDFNLKGLITIKDIEK 201


>gi|254414758|ref|ZP_05028523.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
 gi|196178606|gb|EDX73605.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
          Length = 754

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 13/127 (10%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   LGT      D+ H    +P +       D +  +++   GCV V+ EG++L G+ T
Sbjct: 46  PTQALGT------DMSHIPAHLPQISCLSQEEDTVFGVADTAAGCVLVM-EGERLVGVFT 98

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL---LTVAMQLLRQHNISVLMVVDDC 323
           E DI R       L+ +++ ++M + P + L+ +    +  A+ LLRQH I  L +V++ 
Sbjct: 99  ERDIVRLAAAGLPLSRVNISEIMTR-PAITLQPSPSHDIFTALGLLRQHRIRHLPIVNEQ 157

Query: 324 QKAIGIV 330
            + +GIV
Sbjct: 158 GQLMGIV 164


>gi|291482379|dbj|BAI83454.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 488

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 53/102 (51%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V  +E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L++H I  L +VDD  K  G++   D+ +
Sbjct: 165 ASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDIEK 206


>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
          Length = 239

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 8/105 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-----VEDVMIKNP 293
           +I+A+  +++ + G + V+D   +L+GI TE D        L  LS     V++VM +  
Sbjct: 106 IIEALRKMTQNKVGAIMVLDSNGQLEGIFTERDYVGKVA--LQGLSSRQSLVKEVMTRGV 163

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
           K I  D+ +   M ++       L VVD +  K +G+V   DL+R
Sbjct: 164 KTISADSCVVDTMHIMTNQRFRHLPVVDKESNKVLGMVSIQDLIR 208


>gi|85707037|ref|ZP_01038126.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
 gi|85668478|gb|EAQ23350.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
          Length = 231

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 27/141 (19%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK- 278
           A D+M +  S+  V +   + DA+ ++ +     + VVD    LKG+++EGD+ R   + 
Sbjct: 3   ARDIMTT--SVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRET 60

Query: 279 -----------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                                     +  VEDVM ++   + EDT +    +LL +H I 
Sbjct: 61  DGPRRSWWLEVLGGASESAQDFVKFKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHRIK 120

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            + VV    K +GIV   +LL
Sbjct: 121 RVPVV-RSDKVVGIVSRANLL 140


>gi|291532455|emb|CBL05568.1| Transcriptional regulators [Megamonas hypermegale ART12/1]
          Length = 283

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%), Gaps = 19/182 (10%)

Query: 31  IIAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           +IAEK   SS+   LQ  L      Q   AV+ IK    ++ + G G S  +   + +  
Sbjct: 97  LIAEKL-FSSITDGLQDTLKLIDFEQLEKAVQLIKN-AHQICVYGFGNSFTVCQDIETRF 154

Query: 87  ASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
              G P   + A    H  +    ++T  DLII +S +G++ +L   +  A   ++P+IA
Sbjct: 155 MRFGIP---IKAYNDLHMQVTASSLLTEKDLIICVSHTGANIDLLQAIELAHNNNVPIIA 211

Query: 144 ITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE---SRNF 199
           ITS   S +   AD+VL  + +E       +A   S ++ +AI D L + + +   ++NF
Sbjct: 212 ITSYMNSPLCKLADVVLHGMGREIAYKSEAVA---SRLIHMAIVDILYMGVYQKNVTKNF 268

Query: 200 SE 201
           + 
Sbjct: 269 TN 270


>gi|86158771|ref|YP_465556.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85775282|gb|ABC82119.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 487

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 4/99 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            PL  A+ ++ E     + VV +G +L GI+T  D+   F K+L    VE VM K+    
Sbjct: 106 APLHRAVALMRENGISGIPVV-QGGRLLGILTNRDL--RFEKNLEQ-RVEQVMTKDLVTA 161

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E   +  A +LL +H I  L+VV++  +  G++   D+
Sbjct: 162 HEGVTIEQAKELLHRHRIEKLLVVNERYELRGLITIKDI 200


>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
 gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 146

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE 298
           A  ++++K+ G + VV+ G ++ GI TE D          D +  +++ VM+++P+ I  
Sbjct: 27  ACRLMTDKKIGALLVVENG-RIAGIFTERDALNKILSAALDPDATTLDQVMVRDPQTIGA 85

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  L+ A+ ++ +     + VVD     +G+V   D L
Sbjct: 86  DKPLSYALYMMAEGGFRHVPVVDPSGAPLGMVSARDAL 123


>gi|83312880|ref|YP_423144.1| inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum
           AMB-1]
 gi|82947721|dbj|BAE52585.1| Inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum
           AMB-1]
          Length = 486

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L DA+ ++S+ +   + VV+ G  KL GI+T  D+   F  D     V ++M K+  V +
Sbjct: 104 LADALRLMSDYKISGIPVVERGSGKLVGILTNRDV--RFANDA-AQPVYELMTKDKLVTV 160

Query: 298 EDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +    A +LL QH I  L+VVD   + IG+V   D+
Sbjct: 161 REGVDKEEAKRLLHQHRIEKLLVVDADYRCIGLVTVKDM 199


>gi|294780720|ref|ZP_06746080.1| SIS domain protein [Enterococcus faecalis PC1.1]
 gi|294452160|gb|EFG20602.1| SIS domain protein [Enterococcus faecalis PC1.1]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 178 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 231

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 232 -NVEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 268


>gi|150401102|ref|YP_001324868.1| signal-transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013805|gb|ABR56256.1| putative signal-transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 131

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK+   + D + ++ +     V V D+     GIITE DI +++ ++L  L  ED+M   
Sbjct: 18  VKLNDTIEDVVKVMGKNGISSVVVSDDNNTYWGIITEMDILKHYSENLEKLKAEDIMATK 77

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
              I     L  A Q++ +  I  L VV + +  K IG +   D+++ 
Sbjct: 78  IIHISPIAPLEKAAQIMAEKKIHHLYVVSELREDKIIGTISAGDIIKM 125


>gi|124486199|ref|YP_001030815.1| inosine-5'-monophosphate dehydrogenase [Methanocorpusculum
           labreanum Z]
 gi|124363740|gb|ABN07548.1| inosine-5'-monophosphate dehydrogenase [Methanocorpusculum
           labreanum Z]
          Length = 489

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 1/93 (1%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            ++     G V VV    KL GI++  D+ R       T +VE +M K P  + ++    
Sbjct: 114 NLMDRHSIGGVPVVGPHGKLLGIVSRRDV-RGLVNKTGTETVETIMTKKPIAVKDNITAD 172

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A+ ++    +  L VVDD  +  GI+   DLL
Sbjct: 173 DAINMMYTKKVERLPVVDDKGRLTGIITMQDLL 205


>gi|70607246|ref|YP_256116.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68567894|gb|AAY80823.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 300

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L DA  IL ++      V+D EG+ L GI+T  DI + F +      V D M  N   I 
Sbjct: 191 LRDASQILYKEGIRGAPVLDNEGKNL-GILTTADIIKAFFEQRYDAKVSDYMKTNVISIS 249

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ED  +  A++ +  +N+  L+V++  Q+ IGIV   D+L+
Sbjct: 250 EDDDVLTAIKKMLIYNVGRLLVLNKDQRVIGIVTRTDILK 289


>gi|239906018|ref|YP_002952757.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
           RS-1]
 gi|239795882|dbj|BAH74871.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
           RS-1]
          Length = 820

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 9/116 (7%)

Query: 229 SIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLS 284
           S P+V +G    L++A  +L++KR   + +VDE    KG++T+ D+      D       
Sbjct: 76  SAPVVTVGEEASLVEAYHLLAQKRLRHLVMVDEAGTAKGVLTQSDLIERLGYDSLAEIKR 135

Query: 285 VEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M +  +V+  D  +TV  A+  +   +IS L+V  D + A GI+   D++R 
Sbjct: 136 VSEIMTR--EVVAVDGNITVREAVTRMADRSISCLIVARDGRPA-GIITERDVVRL 188



 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           +A+T ++++   C+ V  +G+   GIITE D+ R   +   L  L + D+M   P V +E
Sbjct: 155 EAVTRMADRSISCLIVARDGRP-AGIITERDVVRLLSESPHLGRLRLYDIM-SCPVVCVE 212

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D  +  A  ++R+  +  L+VVDD  + +G+V   D++R
Sbjct: 213 ADRPVFEAALVMRKRRMRRLVVVDDDLRVMGLVTQSDIVR 252


>gi|167590112|ref|ZP_02382500.1| CBS domain containing membrane protein [Burkholderia ubonensis Bu]
          Length = 192

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           KR G    VD    L+ ++ E ++ + + +    L+  D+M K+   I   T +T A+ L
Sbjct: 15  KRRGEWLDVDPND-LEALLRETEL-QAYARTFGQLTCADLMTKDAISIAPSTSVTAALTL 72

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L +H +  L VVD  ++ +GIV   DL R+
Sbjct: 73  LDRHRVKALPVVDADRRLVGIVTRADLTRY 102


>gi|311893793|dbj|BAJ26201.1| hypothetical protein KSE_03540 [Kitasatospora setae KM-6054]
          Length = 140

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 59/122 (48%), Gaps = 6/122 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
           A ++MH G     V     L +A  I+ ++  G + +  +GQ+L GI+T+ DI       
Sbjct: 4   AKEIMHPGAEC--VTGEQTLAEAARIMRDRGVGALPICGDGQQLLGILTDRDIVLKCVAE 61

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDL 335
            +D   +   ++ +  P VI ED    + + L+ +H +  L V++    K +G++   D+
Sbjct: 62  GRDPAAVRCRELAVGRPMVIEEDEEAELVLALMEEHRVRRLPVINHPDHKLVGMISEADI 121

Query: 336 LR 337
            R
Sbjct: 122 AR 123


>gi|170741756|ref|YP_001770411.1| CBS domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
          Length = 241

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 30/146 (20%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------- 272
           A D+MH    +  V+   PL     I  EKR     VVDE   L GI++EGD+       
Sbjct: 3   ARDIMHR--DVFTVRPETPLGALARIFVEKRISAAPVVDESGALVGIVSEGDLLHRAELA 60

Query: 273 -------FRNFHKDLNTL----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                  +  F   + TL          +V DVM         DT L   +++L + +I 
Sbjct: 61  TDRRRSSWLRFFASIETLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRHIR 120

Query: 316 VLMVVDD----CQKAIGIVHFLDLLR 337
            + +V+      ++ +GIV   DL+R
Sbjct: 121 RVPIVEARPGLPERLVGIVTRSDLVR 146


>gi|15644106|ref|NP_229155.1| inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           maritima MSB8]
 gi|148270558|ref|YP_001245018.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga petrophila RKU-1]
 gi|170289264|ref|YP_001739502.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga sp. RQ2]
 gi|4981914|gb|AAD36425.1|AE001789_10 inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           maritima MSB8]
 gi|147736102|gb|ABQ47442.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga petrophila RKU-1]
 gi|170176767|gb|ACB09819.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga sp. RQ2]
          Length = 321

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I+  KR   V VVD+ +++ GI++  DI +         SVE  M KN   + E   L  
Sbjct: 41  IMRIKRISGVPVVDDKKRVVGIVSLEDIIKALEGSYIKDSVEKRMTKNVVCLKETDTLQD 100

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A++   ++      VVDD  K +GIV   D++ F
Sbjct: 101 AVKTFEKYGYGRFPVVDDEGKLVGIVTKHDIIYF 134


>gi|324504843|gb|ADY42088.1| 5'-AMP-activated protein kinase subunit gamma-2 [Ascaris suum]
          Length = 663

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 15/121 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDV 288
           + +  PLIDA+    +KR   + +VD+  K+  I  + D+        + DL+ ++V D 
Sbjct: 520 ISMHTPLIDALRTFLQKRVSALPLVDKDGKVVDIYAKFDVINLAAEKVYNDLD-VTVHDA 578

Query: 289 MIKNPKVILE--------DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + K+     E        DTL+ V ++++ +  +  L+V D  QK +GI+   D+LRF +
Sbjct: 579 L-KHRSEWFEGVRSCSETDTLMMV-IEVIVRAEVHRLIVTDHEQKVVGIISLSDILRFLV 636

Query: 341 I 341
           +
Sbjct: 637 L 637


>gi|227499358|ref|ZP_03929469.1| IMP dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227218562|gb|EEI83802.1| IMP dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 483

 Score = 42.0 bits (97), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-L 297
           L DA+ I+   R   V +VD+   LKGI+T  D+   F +D   L ++ +M K+  V+  
Sbjct: 105 LQDALDIMKNYRISGVPIVDKEMYLKGILTNRDV--RFEEDPKVL-IDTIMTKDNLVVGY 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E   +  A+ L+ +  I  L +VD+  K  G++   D+
Sbjct: 162 EGIKMKEAISLMEKSKIEKLPIVDEDNKLKGLITIKDI 199


>gi|205375600|ref|ZP_03228387.1| hypothetical protein Bcoam_21763 [Bacillus coahuilensis m4-4]
          Length = 137

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 8/106 (7%)

Query: 236 GCPLID----AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVM 289
            C L+D    A  ++ E   G V +VD G KL G+IT+ DI       K  N+  ++D+M
Sbjct: 13  ACTLLDNVYEAAVLMKEHNIGSVPIVD-GSKLVGMITDRDIVIKGIAEKKPNSSRIQDLM 71

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             N   +  D     A++++++H I  L VV + +  IG+V   DL
Sbjct: 72  STNIITVTADCTTDKALEIMKEHQIRRLPVV-NGEHLIGMVSLGDL 116


>gi|163797469|ref|ZP_02191420.1| IMP dehydrogenase [alpha proteobacterium BAL199]
 gi|159177218|gb|EDP61777.1| IMP dehydrogenase [alpha proteobacterium BAL199]
          Length = 486

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 3/75 (4%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T  D+   F K +N   V D+M K      ED     A +LL +H I  L+VV
Sbjct: 127 NRLVGILTHRDV--RFAKVMNQ-PVRDLMTKRVITAREDVSADEARELLHKHRIEKLLVV 183

Query: 321 DDCQKAIGIVHFLDL 335
           DD ++ +G++   D+
Sbjct: 184 DDDRRCVGLITVKDM 198


>gi|126458826|ref|YP_001055104.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248547|gb|ABO07638.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 138

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 25/97 (25%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           D  T LS+ R G + +V  D+ ++   +++E D+ R   + L+       +   P  +L+
Sbjct: 23  DVATALSQNRVGLLVLVSKDDPKRPVAVVSERDVLRAVAQRLDLDGPAMSIANRPITVLD 82

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + VA + +R HNI  ++VVD   + +G++   D+
Sbjct: 83  TDPVYVAAEKMRAHNIRHVVVVDKEGRLVGVLSIRDI 119


>gi|14520462|ref|NP_125937.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
           GE5]
 gi|5457677|emb|CAB49168.1| Small intracellular module of unknown function,containing CBS
           domains [Pyrococcus abyssi GE5]
          Length = 179

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           ILS+ + G   V+D+ + L GI+TE DI        KD   + VE++M KNP  I  D  
Sbjct: 30  ILSKNKVGSAVVMDKDEVL-GIVTERDILDKVVAKGKDPKEVKVEEIMTKNPVKIEYDYD 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+ L+ +  +  ++V     K IG V   DLL
Sbjct: 89  VQDAIDLMTEKGVRRILVT-KFGKPIGFVTAADLL 122


>gi|283850457|ref|ZP_06367745.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283574028|gb|EFC22000.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 218

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 12/112 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           +I A  I+ EK+   + VVD   +L GI++E D+                   L+ L ++
Sbjct: 20  MIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAASPSSATTLDMYEMTYLLSELKIK 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +M +NP  I     +  A  ++R      L V+D+  K +GI+   D+ R 
Sbjct: 80  GLMTRNPVSIRRSDTVERAALIMRDRKFGSLPVIDEAGKVVGIITDTDIFRL 131



 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 17/35 (48%), Positives = 25/35 (71%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           A  I+ +++FG + V+DE  K+ GIIT+ DIFR F
Sbjct: 98  AALIMRDRKFGSLPVIDEAGKVVGIITDTDIFRLF 132


>gi|156932896|ref|YP_001436812.1| putative DNA-binding transcriptional regulator [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531150|gb|ABU75976.1| hypothetical protein ESA_00698 [Cronobacter sakazakii ATCC BAA-894]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+TGIG SG +    +  L   G  +       A    +  +  +DL++ LS+SG   
Sbjct: 134 RIVLTGIGASGLVAKNFSWKLMKIGLNAVAEQDMHALLATVQAMEPEDLLVALSYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A R    ++AIT    + +   A   L    E ++       +TSA M LA 
Sbjct: 194 EINLAADEALRVGARILAITGFTPNALQQRATQCLYTIAEEQATRSAAISSTSAQMMLA- 252

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 253 -DLLFMALVQ 261


>gi|56419104|ref|YP_146422.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
 gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
          Length = 148

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI     +  KD +T+ V +VM    +V+ 
Sbjct: 28  EAAQIMSQKNIGALPVVENGQ-VKGMITDRDITLRVSSQGKDPSTVKVAEVMTN--QVVT 84

Query: 298 EDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               ++V  A  ++ QH +  L +V++ Q   GIV   D+
Sbjct: 85  GTPNMSVQEAANVMAQHQVRRLPIVENNQLQ-GIVALGDI 123


>gi|300861578|ref|ZP_07107662.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|300849039|gb|EFK76792.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|323479196|gb|ADX78635.1| helix-turn-helix domain, rpiR family protein [Enterococcus faecalis
           62]
          Length = 282

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 178 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 231

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 232 -NVEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 268


>gi|16077077|ref|NP_387890.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307818|ref|ZP_03589665.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312140|ref|ZP_03593945.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317073|ref|ZP_03598367.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321336|ref|ZP_03602630.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313676|ref|YP_004205963.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
 gi|34395945|sp|P21879|IMDH_BACSU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH; AltName:
           Full=Superoxide-inducible protein 12; Short=SOI12
 gi|467399|dbj|BAA05245.1| IMP dehydrogenase [Bacillus subtilis]
 gi|2632276|emb|CAB11785.1| inosine-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320019950|gb|ADV94936.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
          Length = 488

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V  +E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L++H I  L +VDD  K  G++   D+
Sbjct: 165 ASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITIKDI 204


>gi|295112714|emb|CBL31351.1| Predicted transcriptional regulator, contains C-terminal CBS
           domains [Enterococcus sp. 7L76]
          Length = 162

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTLSVEDVM 289
           PL  A  +LS+ R+  + V+D+G +  G+I   D+          +F K LN  +V DVM
Sbjct: 32  PLNHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEK-LNEFTVADVM 90

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  VI E   L   + LL   + S L VVDD Q+  GI+   ++L+
Sbjct: 91  EVNVPVIGESWDLEEVLHLLV--DASFLPVVDDNQRFKGIITRKEILK 136


>gi|222081282|ref|YP_002540645.1| hypothetical protein Arad_7586 [Agrobacterium radiobacter K84]
 gi|221725961|gb|ACM29050.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 245

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 53/123 (43%), Gaps = 25/123 (20%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTL------------- 283
           ++DA  I+ ++R   + VVD    L GI++EGD  R    H + N               
Sbjct: 20  VVDAARIMLDRRVSGLPVVDASGNLVGIVSEGDFLRRGELHTERNRFWLLDFLSSPGKLA 79

Query: 284 ---------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                    S+E+VM      I  +  L  A+ L+ +H I  L VV    K IGIV   D
Sbjct: 80  DEYVLSHGRSIEEVMTSEVVTIAPNAPLIEAVDLMEKHGIKRLPVVVKG-KVIGIVCRSD 138

Query: 335 LLR 337
           LL+
Sbjct: 139 LLQ 141


>gi|126347862|emb|CAJ89582.1| putative transport protein [Streptomyces ambofaciens ATCC 23877]
          Length = 223

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 61/129 (47%), Gaps = 18/129 (13%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTL--- 283
           D++  V+ G P  +   +L E     V VVDE  +  G+++E D+ +  + +DL      
Sbjct: 12  DAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGQDLAGPPGH 71

Query: 284 -----------SVEDV--MIKNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                      S  D   ++ +P +   ED  +  A +++ +H I  L+VVD+  + IG+
Sbjct: 72  GDGPPSAGAKASATDAAGLMTSPALCAREDWSVVDAARVMARHGIKRLLVVDEGGRLIGV 131

Query: 330 VHFLDLLRF 338
           V   DLLR 
Sbjct: 132 VSRSDLLRV 140


>gi|157737269|ref|YP_001489952.1| inosine 5'-monophosphate dehydrogenase [Arcobacter butzleri RM4018]
 gi|315636986|ref|ZP_07892210.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22]
 gi|157699123|gb|ABV67283.1| inosine-5-monophosphate dehydrogenase [Arcobacter butzleri RM4018]
 gi|315478816|gb|EFU69525.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22]
          Length = 481

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  I++  +   V VVD+   L GI+T  D+   F KD       + M K P V   
Sbjct: 105 LQDAEDIMATYKISGVPVVDDNGILVGILTNRDM--RFTKDYR-FKASEKMTKMPLVTAK 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E T L  A +++ Q+ I  L +V+D  K IG++   D+
Sbjct: 162 EGTTLDEAAEVMHQNKIEKLPIVNDNNKLIGLITIKDI 199


>gi|89895828|ref|YP_519315.1| hypothetical protein DSY3082 [Desulfitobacterium hafniense Y51]
 gi|219670260|ref|YP_002460695.1| hypothetical protein Dhaf_4253 [Desulfitobacterium hafniense DCB-2]
 gi|89335276|dbj|BAE84871.1| hypothetical protein [Desulfitobacterium hafniense Y51]
 gi|219540520|gb|ACL22259.1| Helix-turn-helix type 11 domain protein [Desulfitobacterium
           hafniense DCB-2]
          Length = 215

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 54/105 (51%), Gaps = 7/105 (6%)

Query: 224 MHSGD--SIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HK 278
           +  GD  S+P+ ++    + DAI  +  +  G + VV EGQ L+G+++  D+ ++     
Sbjct: 75  LRVGDFKSLPISIRENISIYDAIVTMFTQNVGSLTVVGEGQTLRGMVSRKDLLKSTLGKT 134

Query: 279 DLNTLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVVD 321
           DL  + V  +M + P +I+   D  +  A + L  H I  L VV+
Sbjct: 135 DLQQVPVSIIMTRMPNIIMTTADEPVLEAARKLTLHQIDTLPVVE 179


>gi|255077916|ref|XP_002502538.1| predicted protein [Micromonas sp. RCC299]
 gi|226517803|gb|ACO63796.1| predicted protein [Micromonas sp. RCC299]
          Length = 206

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 18/139 (12%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N S ++  V+ P G +       +DVM S      +  G PL DAI   + +R+   A  
Sbjct: 68  NTSMDEASVVDPYGHV-------ADVMSSPART--LTTGLPLEDAIVATTMERYQTGACC 118

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                  G+++  D+ R   K L   +VEDVM   P+   +   +     ++ +H I  +
Sbjct: 119 -------GVLSRTDLDRV--KSLGGYTVEDVMSSPPRTCKQRATVASVAGMMLKHKIHRI 169

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VV+D    IGIV   D+ 
Sbjct: 170 PVVNDRDVPIGIVTRTDIF 188


>gi|226355880|ref|YP_002785620.1| hypothetical protein Deide_09850 [Deinococcus deserti VCD115]
 gi|226317870|gb|ACO45866.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 207

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 13/113 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-------- 288
            P++DA+ IL E  F  + VV EG +L GI T  D+         TLSV ++        
Sbjct: 18  TPVMDALKILKEGNFRRLPVV-EGSQLVGITTRKDLKDAMPSKATTLSVWELNYLLSKLT 76

Query: 289 ---MIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              M+  P +   E   +  A   +++H++  L V+ D  +  GI+  +D+LR
Sbjct: 77  VSEMMARPVITAAEGEYMEDAALRMQEHHVGGLPVLSDSGRLSGIITTMDVLR 129


>gi|45357615|ref|NP_987172.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|45047175|emb|CAF29608.1| Conserved Hypothetical protein with 2 CBS domains [Methanococcus
           maripaludis S2]
          Length = 303

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  +LS+     + V+D G+KL G+++  D+     + L   +V  +M +    I ++ 
Sbjct: 192 DAAKLLSDANISGIPVMD-GKKLLGVLSLHDVADAVSRGLENENVTKLMAEKIYTISKNE 250

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A+ L+ +HN+  L+V+D+ + AIGI+   D+L  
Sbjct: 251 KIYDALILMEKHNVGRLIVLDNEEIAIGILTRTDILNL 288


>gi|150401107|ref|YP_001324873.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013810|gb|ABR56261.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 399

 Score = 42.0 bits (97), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 55/104 (52%), Gaps = 4/104 (3%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKN 292
             P +DA+  +LS  +     V DEG KL GIIT+ DI +       L  + V  +M K+
Sbjct: 78  NTPFMDAVCEVLSSGQRAAPLVDDEG-KLVGIITDHDIMKRVATSELLEDVKVNKLMSKS 136

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  I  +  +  A  L+R+++IS L+++D   +  G++   D+L
Sbjct: 137 PITIDYNESIGKARSLMRKYDISRLVILDKDAEPTGMITEEDIL 180


>gi|34557352|ref|NP_907167.1| hypothetical protein WS0964 [Wolinella succinogenes DSM 1740]
 gi|34483068|emb|CAE10067.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 804

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 61/102 (59%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVI 296
           L +A++++ E + G + ++ EG+++ G++TE  I R       L + +VE  + KNP ++
Sbjct: 152 LKEALSLMVENKIGTLPMLGEGERILGMLTERKIVRMVELGVSLESPAVE-FIDKNPYLV 210

Query: 297 LEDTLLTVAMQLLRQHNISV-LMVVDDCQKAIGIVHFLDLLR 337
            ED+ +   + +  +++ S+ ++V+D  ++  GI+   DLL+
Sbjct: 211 HEDSFINEIIDIFEKNSDSLCVLVIDSSRELKGIITKRDLLK 252


>gi|299822922|ref|ZP_07054808.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
 gi|299816451|gb|EFI83689.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
          Length = 389

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           AI I+ +KR   + VVD+   LKG I    I  N        SV D+M ++   + EDTL
Sbjct: 271 AIQIMKDKRVDTLLVVDDRHNLKGFIDVEAINNNRR---TATSVIDIMERDVFSVTEDTL 327

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +   +Q + +     + VVD+ +K +GIV
Sbjct: 328 VRDTIQRILKRGYKYVPVVDNEKKLVGIV 356


>gi|255038186|ref|YP_003088807.1| inosine-5'-monophosphate dehydrogenase [Dyadobacter fermentans DSM
           18053]
 gi|254950942|gb|ACT95642.1| inosine-5'-monophosphate dehydrogenase [Dyadobacter fermentans DSM
           18053]
          Length = 490

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I+ E + G + V+D+  KL GI+T  D+   F +++    V ++M K+  V   
Sbjct: 110 LGEAHQIMREFKIGGIPVIDKDHKLVGILTNRDL--RFQREMAK-PVTEIMTKDNLVTAS 166

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L L  A ++L+++ I  L +VD   +  G++ + D+L+
Sbjct: 167 EGLSLDDAEKILQEYKIEKLPIVDADYRLTGLITYKDILK 206


>gi|310821572|ref|YP_003953930.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394644|gb|ADO72103.1| Inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 485

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 79/191 (41%), Gaps = 16/191 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG----- 211
           D VL LP E    P  +  +T    QL +   L  A +++   S +   +   GG     
Sbjct: 13  DDVLLLPAESSVVPRDVELSTRLTRQLRLHIPLLSAAMDTVTESRSAIAMAQEGGIGVIH 72

Query: 212 -----KLGTLFVCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                +   L V       SG  +  V I  G PL  A+ ++       V V  +G++L 
Sbjct: 73  KNMTPEQQALEVLKVKKFESGMVVDPVTIEPGAPLARALELMRHHGVSGVPVT-QGRRLV 131

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T  D+   F  +L T  VE VM +      E      A  LL QH I  L++V++  
Sbjct: 132 GIVTSRDV--RFETNL-TQKVEQVMTRKLITGREGITQPEAQALLHQHRIEKLLIVNEEF 188

Query: 325 KAIGIVHFLDL 335
           +  G++   D+
Sbjct: 189 ELKGLITIKDI 199


>gi|134046651|ref|YP_001098136.1| signal transduction protein [Methanococcus maripaludis C5]
 gi|132664276|gb|ABO35922.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C5]
          Length = 303

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 80/169 (47%), Gaps = 26/169 (15%)

Query: 195 ESRNFSENDFYVLHPG--GKLGTL--FVCASDVMH-------SGDSIPLVKIG------- 236
           ++R FSE D   + P    K+  L   V   D+ H       S  S+P + +G       
Sbjct: 121 DTRKFSEGDIVKVGPTHHNKIVILGKIVGRDDINHILLMDVISVASVPGISVGDVGIKEK 180

Query: 237 ----CP---LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                P   + DA  +L++     + V+D G+KL G+++  D+     + L   +V ++M
Sbjct: 181 LIYITPEKTIRDAAKLLADANISGIPVMD-GKKLLGVLSLHDVAEAVSRGLENENVTELM 239

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    + ++  +  A+ L+ ++N+  L+VVD+ + A+GI+   D+L  
Sbjct: 240 AEKIYTVSKNEKIYDALILMEKYNVGRLIVVDNEEYAVGILTRTDILNL 288


>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
          Length = 156

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 66/154 (42%), Gaps = 41/154 (26%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V   DV++  D+  + K+       I I+ +++   + VV+   KL G++T+GDI R+  
Sbjct: 7   VMTKDVVYVHDNEGIAKV-------IDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRSLD 59

Query: 278 -KDLNTLSVE---------------------------------DVMIKNPKVILEDTLLT 303
             D  T +V                                  DVM K+P  +  +  + 
Sbjct: 60  IPDFPTSAVSPPPFDFIERLIKVKMEEWDVERALEMWKSGKVSDVMTKDPASVHMNDDVE 119

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A  ++ + N+  L VVDD  K +GIV  LDLL+
Sbjct: 120 KAADIMLEKNVHRLPVVDDDGKLVGIVTRLDLLK 153


>gi|307354272|ref|YP_003895323.1| CBS domain-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307157505|gb|ADN36885.1| CBS domain containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 381

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 42/82 (51%), Gaps = 1/82 (1%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V E   L G++T  DI      D   + V DVM K+P  +  +  LT A++L+   NI  
Sbjct: 294 VIENGALIGVVTLHDINTISAIDREAMIVRDVMTKDPVTLPPEAPLTDALKLMSTMNIGR 353

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + VV D Q   GIV   D+LRF
Sbjct: 354 VPVVRDGQVE-GIVTRTDILRF 374


>gi|89902609|ref|YP_525080.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89347346|gb|ABD71549.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 153

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 6/105 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDE--GQKLK-GIITEGDIFRNF---HKDLNTLSVEDVMIK 291
           PL  A  ++ E   GC+ VVDE  G+++  G++T+ DI         D +TL VEDVM  
Sbjct: 23  PLNGAARLMRENHVGCLVVVDEVGGKRIVVGVLTDRDIVTAVVASDLDPSTLQVEDVMST 82

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     ED  L   M  +R+  +  + VV +  + +G+V   D+L
Sbjct: 83  DLVTAREDDSLIDLMHSMRRKGVRRVPVVGEQDELMGVVTLDDVL 127


>gi|257869236|ref|ZP_05648889.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           gallinarum EG2]
 gi|257803400|gb|EEV32222.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           gallinarum EG2]
          Length = 600

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 4/144 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G    + L S       VH +     ++ +++     I LS SG + 
Sbjct: 290 RIYIVACGTSNHAGWAAKAILESLTQIPVEVHLSSEFGYNMPLLSAKPFFIFLSQSGETA 349

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    + ++P + IT+   S ++  AD  L L   PE     +A T +   Q+A+
Sbjct: 350 DSRQVLVKINQMNLPSLTITNVAGSTLSREADHTLLLHAGPEIA---VASTKAYTAQIAV 406

Query: 186 GDALAIALLESRNF-SENDFYVLH 208
              LA A+ +++   +  DF V H
Sbjct: 407 LTLLAKAIGDAKGIGAAQDFDVFH 430


>gi|94984821|ref|YP_604185.1| signal transduction protein [Deinococcus geothermalis DSM 11300]
 gi|94555102|gb|ABF45016.1| putative signal transduction protein with CBS domains [Deinococcus
           geothermalis DSM 11300]
          Length = 211

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 13/113 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-------- 288
            P++DA+ IL E  F  + V+ EG +L GI T  D+         TLSV ++        
Sbjct: 18  TPVMDALKILKEHGFRRLPVM-EGDRLVGITTRKDLKDAMPSKATTLSVWELNYLLSKLT 76

Query: 289 ---MIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              M+ +P +   ED  +  A   +++H++  L V++   +  GI+   D+LR
Sbjct: 77  VREMMASPVITAHEDEYMEDAALRMQEHDVGGLPVLNQDGRMTGIITITDVLR 129


>gi|329766621|ref|ZP_08258164.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329136876|gb|EGG41169.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 477

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI    EK    + VVD   KL GI+T+ D+   F  D   L ++DVM K+        
Sbjct: 107 DAINYAEEKEISGLLVVDSNSKLVGIVTDRDLL--FETDSTRL-IKDVMTKDVVTAKLGV 163

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A ++L +H I  L ++DD     G++   D+
Sbjct: 164 SLDEAKKILHKHRIEKLPIIDDSGFIKGLITSKDI 198



 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 27/49 (55%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VMI+NP  +  D  +  A+    +  IS L+VVD   K +GIV   DLL
Sbjct: 91  VMIENPYAVSSDKTVQDAINYAEEKEISGLLVVDSNSKLVGIVTDRDLL 139


>gi|299143987|ref|ZP_07037067.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518472|gb|EFI42211.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 483

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++   R   V +VDE  KL+GIIT  DI   F +DL+   + +VM K   +     
Sbjct: 107 DADRLMDTYRISGVPIVDENNKLEGIITNRDI--RFEQDLDK-KISEVMTKENLITGHVG 163

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + L  A+++LR++ +  L ++DD     G++   D+
Sbjct: 164 ISLDEALKILRRYKVEKLPLIDDDGLLKGLITIKDI 199


>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
 gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
          Length = 232

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 35/197 (17%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           P+ P + PH  +P  SA  + +I  +   A L  R   ++       G   G+  V   D
Sbjct: 22  PRLP-AGPHVASPGPSARPRTSIRASAVSAALAVRGLPQHASVA---GQSTGSYRV--GD 75

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-------------- 268
           VM   + + +VK    + DA+ +L + R     V+D+   L G+++              
Sbjct: 76  VMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAG 135

Query: 269 --EGDIF-------RNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             E DIF       + FH+    LS      + DVM   P V+ E T L  A +LL    
Sbjct: 136 PAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTK 195

Query: 314 ISVLMVVDDCQKAIGIV 330
              L VVD   K +GI+
Sbjct: 196 YRRLPVVDSSGKLVGII 212


>gi|111223347|ref|YP_714141.1| hypothetical protein FRAAL3940 [Frankia alni ACN14a]
 gi|111150879|emb|CAJ62583.1| conserved hypothetical protein [Frankia alni ACN14a]
          Length = 132

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILE 298
           A  ++ E   G + V + G    G++T+ DI        +D +T  V DV   + + +  
Sbjct: 17  AARLMREIDAGVIVVTENGGGAAGVLTDRDITVRVVAEDRDPHTTPVRDVASGDIETVTS 76

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +TL+  A +L+R   +  L VVDD  + +G+V   DL R G
Sbjct: 77  NTLIDDAAELMRLRAVRRLPVVDD-NRIVGVVSLGDLAREG 116


>gi|108762340|ref|YP_635487.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108466220|gb|ABF91405.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 380

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF--HKDLNTLSVEDVMIKNP 293
            PL D   I+ ++  G V +VDE  +L GI+T+ D + R F   +    L   DVM  + 
Sbjct: 251 SPLRDIARIMKDESCGVVPIVDERDRLVGIVTDRDLVVRAFTGGRSPEQLRASDVMTDDV 310

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  D  L   + L+ +  +  + VV+     +GI+   D+
Sbjct: 311 EAVTPDDTLHDVIGLMGRRQLRRIPVVERDDGIVGIISLGDI 352


>gi|332663302|ref|YP_004446090.1| inosine-5'-monophosphate dehydrogenase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332116|gb|AEE49217.1| inosine-5'-monophosphate dehydrogenase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 520

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA + +   + G + VVD    L G++T  D+   F   L+    E +  KN       T
Sbjct: 141 DAKSHMERFKIGGIPVVDAENHLVGVLTNRDL--RFETSLDRPVYELMTSKNLVTAPAGT 198

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A ++L+++ I  L VVDD  K +G++ + D+++
Sbjct: 199 TLYQAREILQRNKIEKLPVVDDHNKLVGLITYKDIMK 235


>gi|260598944|ref|YP_003211515.1| putative DNA-binding transcriptional regulator [Cronobacter
           turicensis z3032]
 gi|260218121|emb|CBA32914.1| Uncharacterized HTH-type transcriptional regulator yfhH
           [Cronobacter turicensis z3032]
          Length = 295

 Score = 42.0 bits (97), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+TGIG SG +    +  L   G  +       A    +  +  +DL++ LS+SG   
Sbjct: 147 RIVLTGIGASGLVAKNFSWKLMKIGLNAVAEQDMHALLATVQAMEPEDLLVALSYSGERR 206

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A R    ++AIT    + +   A   L    E ++       +TSA M LA 
Sbjct: 207 EINLAADEALRVGARILAITGFTPNALQQRATQCLYTIAEEQATRSAAISSTSAQMMLA- 265

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 266 -DLLFMALVQ 274


>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
 gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 164

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNP 293
             + DAI +++ ++ G + V  EG ++ GI+TE D  R      +      V D+M    
Sbjct: 23  ASVYDAIAVMAHRQVGALIVAHEG-RIAGIVTERDYARKIVLMDRSSRHTPVRDIMSTAV 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + I  D      M L+ +H I  L V+   Q  IG+V   DL++  I+
Sbjct: 82  RYIGPDQTTEECMALMTEHRIRYLPVITAGQ-VIGMVSIGDLVQNLIV 128


>gi|15921004|ref|NP_376673.1| inosine-5'-monophosphate dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15621788|dbj|BAB65782.1| 254aa long hypothetical inosine-5'-monophosphate dehydrogenase
           [Sulfolobus tokodaii str. 7]
          Length = 254

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKI-----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           DSI   KI        +++A  I++ +    + +V+E  ++ GIIT  DI +   K  N 
Sbjct: 133 DSIMSTKIETIPQNSTILEAAKIMAMRGIRRLPIVNE-YRMVGIITAADIVKYLEKHRNI 191

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V D   KNP  I   T +  A +++++  I  L VVD+  K +GIV   DL+
Sbjct: 192 GNVLDAGTKNPWTINRYTSIIDAAKIMKEKKIGTLPVVDNS-KLVGIVTERDLM 244


>gi|329938549|ref|ZP_08287974.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
 gi|329302522|gb|EGG46413.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
          Length = 253

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDVMIK 291
            P  + + +L   R G + VVDE  K+ G+++  D+      R+       ++ +D+M  
Sbjct: 21  TPFKELVRLLDRHRIGGLPVVDEDDKVVGVLSGTDLVRAQAGRSGRAPAGAVTAQDLMST 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  +  +  A +L+ +  +  L V+D+  + IGI    DLLR 
Sbjct: 81  PAVTVHPEQSVPDAARLMERRGVERLPVIDEEDRLIGIATRRDLLRV 127


>gi|239814766|ref|YP_002943676.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
 gi|239801343|gb|ACS18410.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
          Length = 376

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 4/65 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +LGTL  C  D+M S D +  V+ G PL +A  +++++R   + V D  +++ GI+T+ D
Sbjct: 224 RLGTLH-CG-DIM-SRDPVS-VEFGTPLQEAWMLMNQRRIKALPVTDRTRRVVGIVTQAD 279

Query: 272 IFRNF 276
            FR  
Sbjct: 280 FFRQL 284


>gi|162451740|ref|YP_001614107.1| hypothetical protein sce3467 [Sorangium cellulosum 'So ce 56']
 gi|161162322|emb|CAN93627.1| hypothetical protein sce3467 [Sorangium cellulosum 'So ce 56']
          Length = 138

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIKNPK 294
           G P+ID + + +        V+D G  + G ++E D+      K+   ++  DVM   P 
Sbjct: 23  GTPVIDMLQLFASHHLSGAPVIDGGHHIVGFVSETDLLGVLLRKEYAGMTAADVMSTPPI 82

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + E       M LLR + I  L VV +  + +GI+   D+LR+
Sbjct: 83  CVDEFMPTDEVMTLLRANRIHHLPVVREG-RLVGIITPQDILRY 125


>gi|138894186|ref|YP_001124639.1| inosine-5-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265699|gb|ABO65894.1| Inosine-5-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
          Length = 136

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 15/103 (14%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKN----- 292
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI     +  KD   + V DVM        
Sbjct: 16  EAAQIMSQKNIGALPVVESGQ-VKGMITDRDITLRVTSQGKDPAAVKVSDVMTNQVVTGT 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P + ++D     A  ++ QH +  L +V++ Q   GIV   D+
Sbjct: 75  PNMSVQD-----AANVMAQHQVRRLPIVENNQLQ-GIVALGDI 111


>gi|256958539|ref|ZP_05562710.1| helix-turn-helix protein RpiR [Enterococcus faecalis DS5]
 gi|257078145|ref|ZP_05572506.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis JH1]
 gi|307270015|ref|ZP_07551340.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|307288058|ref|ZP_07568074.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|256949035|gb|EEU65667.1| helix-turn-helix protein RpiR [Enterococcus faecalis DS5]
 gi|256986175|gb|EEU73477.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis JH1]
 gi|306500936|gb|EFM70251.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|306513680|gb|EFM82287.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|315032994|gb|EFT44926.1| SIS domain protein [Enterococcus faecalis TX0017]
 gi|315035213|gb|EFT47145.1| SIS domain protein [Enterococcus faecalis TX0027]
 gi|315163556|gb|EFU07573.1| SIS domain protein [Enterococcus faecalis TX1302]
 gi|329577555|gb|EGG58990.1| SIS domain protein [Enterococcus faecalis TX1467]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 181 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 234

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 235 -NVEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 271


>gi|261403508|ref|YP_003247732.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
 gi|261370501|gb|ACX73250.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
          Length = 130

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 60/118 (50%), Gaps = 6/118 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM  G  +  V +   L + I  +++     V VV +G+   GIIT+ D+ +++H    
Sbjct: 9   DVMKKG--VVEVNLDAKLSEIIKTMAKYDISSV-VVSDGETFWGIITDTDVMKHYHNLEK 65

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLRF 338
           T   E++M  NP  +  +  L  A++++ +  I  L V   C +K +G++   D+++ 
Sbjct: 66  T--AEEIMTTNPITVSPEAPLEKAVEIMAERGIHHLYVRSPCEEKIVGVLSSKDVIKL 121


>gi|315150886|gb|EFT94902.1| SIS domain protein [Enterococcus faecalis TX0012]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 181 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 234

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 235 -NVEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 271


>gi|225619253|ref|YP_002720479.1| GGDEF domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214072|gb|ACN82806.1| GGDEF domain protein [Brachyspira hyodysenteriae WA1]
          Length = 331

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 25/116 (21%), Positives = 62/116 (53%), Gaps = 8/116 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + I ++K    L++  +++S+     +AV+++  K+ GII   ++  N  K++N    ++
Sbjct: 3   NKIEVIKKDSTLVEVASLVSKSSNKILAVINDSDKIVGIINYNELLVNILKNINKKDSKN 62

Query: 288 V--------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +        M KN  +   +  ++VA  +++++ I  L++V++    IGI++  D+
Sbjct: 63  IFNKAISTFMNKNLVIAHPEDDISVAFDIMKENKIDYLVIVNNDHYPIGIINIYDI 118


>gi|146339451|ref|YP_001204499.1| hypothetical protein BRADO2437 [Bradyrhizobium sp. ORS278]
 gi|146192257|emb|CAL76262.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
           ORS278]
          Length = 141

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 11/97 (11%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLSVEDVMIKNPKVILEDT 300
           F    VV E  ++ GI+T+ D+ + F          + DL   +V DVM      +  DT
Sbjct: 38  FNTYPVV-ENDEVIGIVTKFDVLKCFAFTPNQMLPRYSDLMNRTVADVMTSEFIYVRPDT 96

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LT  +QL+ +H I  L V D   + +GI+   D++R
Sbjct: 97  KLTRVLQLMVEHRIRSLPVTDGDNRLVGIIAREDIVR 133


>gi|78062154|ref|YP_372062.1| CBS domain-containing protein [Burkholderia sp. 383]
 gi|77970039|gb|ABB11418.1| CBS domain containing membrane protein [Burkholderia sp. 383]
          Length = 391

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           KR G    VD    L+ ++ E ++ + + +    LS  D+M KN   +   T +T A+ L
Sbjct: 214 KRRGEWLDVDP-DDLEALLRETEM-QAYTRTFGQLSCADLMTKNAIEVAPSTSVTAALTL 271

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L +H +  L VVD   +  GIV   DL R
Sbjct: 272 LDRHRVKALPVVDGEGRLTGIVTRADLTR 300


>gi|29377729|ref|NP_816883.1| phosphosugar-binding transcriptional regulator, putative
           [Enterococcus faecalis V583]
 gi|227517131|ref|ZP_03947180.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|227555226|ref|ZP_03985273.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229547305|ref|ZP_04436030.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX1322]
 gi|255970542|ref|ZP_05421128.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255974125|ref|ZP_05424711.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis T2]
 gi|256617976|ref|ZP_05474822.1| helix-turn-helix protein RpiR [Enterococcus faecalis ATCC 4200]
 gi|256760906|ref|ZP_05501486.1| Sugar isomerase [Enterococcus faecalis T3]
 gi|256854934|ref|ZP_05560298.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256960601|ref|ZP_05564772.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis Merz96]
 gi|256963099|ref|ZP_05567270.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis HIP11704]
 gi|257080308|ref|ZP_05574669.1| helix-turn-helix protein RpiR [Enterococcus faecalis E1Sol]
 gi|257083068|ref|ZP_05577429.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|257088429|ref|ZP_05582790.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis D6]
 gi|257091497|ref|ZP_05585858.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257417379|ref|ZP_05594373.1| helix-turn-helix protein RpiR [Enterococcus faecalis AR01/DG]
 gi|257418102|ref|ZP_05595096.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257420291|ref|ZP_05597281.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|293384395|ref|ZP_06630276.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis R712]
 gi|293389791|ref|ZP_06634232.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis S613]
 gi|307272621|ref|ZP_07553872.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|307274509|ref|ZP_07555690.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|307283904|ref|ZP_07564077.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|307290750|ref|ZP_07570648.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|312899762|ref|ZP_07759082.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|312905579|ref|ZP_07764693.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|312906546|ref|ZP_07765547.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|312910763|ref|ZP_07769601.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|312953735|ref|ZP_07772568.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|29345197|gb|AAO82953.1| phosphosugar-binding transcriptional regulator, putative
           [Enterococcus faecalis V583]
 gi|227075411|gb|EEI13374.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|227175644|gb|EEI56616.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229307544|gb|EEN73531.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX1322]
 gi|255961560|gb|EET94036.1| conserved hypothetical protein [Enterococcus faecalis T1]
 gi|255966997|gb|EET97619.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis T2]
 gi|256597503|gb|EEU16679.1| helix-turn-helix protein RpiR [Enterococcus faecalis ATCC 4200]
 gi|256682157|gb|EEU21852.1| Sugar isomerase [Enterococcus faecalis T3]
 gi|256710494|gb|EEU25538.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256951097|gb|EEU67729.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis Merz96]
 gi|256953595|gb|EEU70227.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis HIP11704]
 gi|256988338|gb|EEU75640.1| helix-turn-helix protein RpiR [Enterococcus faecalis E1Sol]
 gi|256991098|gb|EEU78400.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|256996459|gb|EEU83761.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis D6]
 gi|257000309|gb|EEU86829.1| conserved hypothetical protein [Enterococcus faecalis CH188]
 gi|257159207|gb|EEU89167.1| helix-turn-helix protein RpiR [Enterococcus faecalis ARO1/DG]
 gi|257159930|gb|EEU89890.1| conserved hypothetical protein [Enterococcus faecalis T11]
 gi|257162115|gb|EEU92075.1| conserved hypothetical protein [Enterococcus faecalis X98]
 gi|291078243|gb|EFE15607.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis R712]
 gi|291080917|gb|EFE17880.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis S613]
 gi|306498170|gb|EFM67689.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|306503554|gb|EFM72801.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|306508781|gb|EFM77870.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|306510723|gb|EFM79742.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|310627415|gb|EFQ10698.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|310628339|gb|EFQ11622.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|310631308|gb|EFQ14591.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|311288962|gb|EFQ67518.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|311293114|gb|EFQ71670.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|315028017|gb|EFT39949.1| SIS domain protein [Enterococcus faecalis TX2137]
 gi|315030828|gb|EFT42760.1| SIS domain protein [Enterococcus faecalis TX4000]
 gi|315143905|gb|EFT87921.1| SIS domain protein [Enterococcus faecalis TX2141]
 gi|315148390|gb|EFT92406.1| SIS domain protein [Enterococcus faecalis TX4244]
 gi|315152747|gb|EFT96763.1| SIS domain protein [Enterococcus faecalis TX0031]
 gi|315154580|gb|EFT98596.1| SIS domain protein [Enterococcus faecalis TX0043]
 gi|315158951|gb|EFU02968.1| SIS domain protein [Enterococcus faecalis TX0312]
 gi|315162284|gb|EFU06301.1| SIS domain protein [Enterococcus faecalis TX0645]
 gi|315167033|gb|EFU11050.1| SIS domain protein [Enterococcus faecalis TX1341]
 gi|315171224|gb|EFU15241.1| SIS domain protein [Enterococcus faecalis TX1342]
 gi|315172860|gb|EFU16877.1| SIS domain protein [Enterococcus faecalis TX1346]
 gi|315575417|gb|EFU87608.1| SIS domain protein [Enterococcus faecalis TX0309B]
 gi|315576525|gb|EFU88716.1| SIS domain protein [Enterococcus faecalis TX0630]
 gi|315580848|gb|EFU93039.1| SIS domain protein [Enterococcus faecalis TX0309A]
 gi|327536387|gb|AEA95221.1| RpiR family transcriptional regulator [Enterococcus faecalis OG1RF]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 181 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 234

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 235 -NVEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 271


>gi|15899877|ref|NP_344482.1| hypothetical protein SSO3174 [Sulfolobus solfataricus P2]
 gi|284175210|ref|ZP_06389179.1| hypothetical protein Ssol98_11260 [Sulfolobus solfataricus 98/2]
 gi|13816604|gb|AAK43272.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601556|gb|ACX91159.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 131

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 224 MHSGDSI---PL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           M+  D I   PL VK    + DA  I+  +  G + +VDE  K  GI+TE DI R    +
Sbjct: 1   MYVADLITRNPLTVKPETSIRDAAKIMKRENLGSLIIVDETNKPIGIVTERDILRAVADE 60

Query: 280 LNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +   S V  +M +    I  +  +T A+ ++ Q+N+  L VV    + +G++   D
Sbjct: 61  VALDSPVSTIMTRGLITIPPNKDVTEALIIMYQNNVRHLAVVGQSGELVGVISIRD 116



 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 35/55 (63%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V D++ +NP  +  +T +  A +++++ N+  L++VD+  K IGIV   D+LR
Sbjct: 1   MYVADLITRNPLTVKPETSIRDAAKIMKRENLGSLIIVDETNKPIGIVTERDILR 55


>gi|94984655|ref|YP_604019.1| inosine-5'-monophosphate dehydrogenase [Deinococcus geothermalis
           DSM 11300]
 gi|94554936|gb|ABF44850.1| inosine-5'-monophosphate dehydrogenase [Deinococcus geothermalis
           DSM 11300]
          Length = 547

 Score = 41.6 bits (96), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A  +++E +   V + D   KL GIIT  D+   F +D  T  VEDVM +   V +   
Sbjct: 172 EADRLMAEYKISGVPITDPAGKLLGIITNRDM--RFVEDPAT-PVEDVMTRENLVTVPVG 228

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  + ++H I  L+V D+     G++   DL +
Sbjct: 229 TTLEEAQAIFKRHRIEKLLVTDEAGFLRGLITIKDLTK 266


>gi|328675792|gb|AEB28467.1| Inosine-5'-monophosphate dehydrogenase [Francisella cf. novicida
           3523]
          Length = 486

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 54/113 (47%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I + + +   MQL ++HN S   VVDD  K IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQQSSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FRF 141



 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + +  E  F    VVD+  K+ GI+T  D FR F KDL+   V  +M    K++   ED 
Sbjct: 110 MQLAKEHNFSGFPVVDDNNKIIGIVTRRD-FR-FAKDLDE-PVSSIMTPKEKLVTVPEDA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + L +H I  L+VV++  + +G++   D+ R
Sbjct: 167 SQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|124002464|ref|ZP_01687317.1| CBS domain pair protein [Microscilla marina ATCC 23134]
 gi|123992293|gb|EAY31661.1| CBS domain pair protein [Microscilla marina ATCC 23134]
          Length = 662

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 38/160 (23%), Positives = 73/160 (45%), Gaps = 14/160 (8%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           TT+ +  +A        + E +  S  D    HP   L   F+       S D IP  + 
Sbjct: 470 TTAIVAGMAYNQKTKKPVHEWKLASIQDIADWHPTSLLVEEFMTTDIFTVSKDEIP--EF 527

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMI 290
              ++D       +R   + + +E  +L G+IT   + R+F     ++ L+  +++D+MI
Sbjct: 528 SADMMDW------RRIRYLPIENEQGELIGLITSRQLLRHFSTMYKNEKLDYSTIKDLMI 581

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           K+P  I  +  +  A+ ++    I  L VV++ +K +GI+
Sbjct: 582 KDPLTIAPEATIIEAIDVMNTQKIGCLPVVNN-KKLVGII 620


>gi|69244286|ref|ZP_00602754.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257878376|ref|ZP_05658029.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257889425|ref|ZP_05669078.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257892632|ref|ZP_05672285.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|258616103|ref|ZP_05713873.1| RpiR family transcriptional regulator [Enterococcus faecium DO]
 gi|260559959|ref|ZP_05832138.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|293560515|ref|ZP_06677005.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|293568869|ref|ZP_06680182.1| transcriptional regulator [Enterococcus faecium E1071]
 gi|294617223|ref|ZP_06696871.1| transcriptional regulator [Enterococcus faecium E1679]
 gi|294621878|ref|ZP_06701033.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|314940501|ref|ZP_07847643.1| SIS domain protein [Enterococcus faecium TX0133a04]
 gi|314943266|ref|ZP_07850048.1| SIS domain protein [Enterococcus faecium TX0133C]
 gi|314948458|ref|ZP_07851843.1| SIS domain protein [Enterococcus faecium TX0082]
 gi|314952977|ref|ZP_07855939.1| SIS domain protein [Enterococcus faecium TX0133A]
 gi|314994212|ref|ZP_07859517.1| SIS domain protein [Enterococcus faecium TX0133B]
 gi|314997132|ref|ZP_07862120.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|68196472|gb|EAN10899.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257812604|gb|EEV41362.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257825785|gb|EEV52411.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257829011|gb|EEV55618.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|260074183|gb|EEW62506.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|291588302|gb|EFF20137.1| transcriptional regulator [Enterococcus faecium E1071]
 gi|291596512|gb|EFF27757.1| transcriptional regulator [Enterococcus faecium E1679]
 gi|291598537|gb|EFF29599.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|291605482|gb|EFF34926.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|313588802|gb|EFR67647.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|313591393|gb|EFR70238.1| SIS domain protein [Enterococcus faecium TX0133B]
 gi|313594913|gb|EFR73758.1| SIS domain protein [Enterococcus faecium TX0133A]
 gi|313597994|gb|EFR76839.1| SIS domain protein [Enterococcus faecium TX0133C]
 gi|313640272|gb|EFS04853.1| SIS domain protein [Enterococcus faecium TX0133a04]
 gi|313645116|gb|EFS09696.1| SIS domain protein [Enterococcus faecium TX0082]
          Length = 282

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 66  RVVITGIGKSGHIGSK-----LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           RV   G+G S  + +      L S +A++ +  + +   EAS     ++T  D  +++S 
Sbjct: 133 RVYFFGVGGSEIVATDAYHKFLRSPIATSHSTDYHIQLMEAS-----LLTEKDCAVLISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSA 179
           +G S E   I    R+     I ITS+  S +A   D+V +++ +E E     LA   S 
Sbjct: 188 TGQSKETIHIAETVRKTGAKTIVITSQANSSLAKLGDVVFISISEETEFRSEALA---SR 244

Query: 180 IMQLAIGDALAIALL 194
           I QL+I D+L + L+
Sbjct: 245 ISQLSILDSLYVILM 259


>gi|291286024|ref|YP_003502840.1| inosine-5'-monophosphate dehydrogenase [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290883184|gb|ADD66884.1| inosine-5'-monophosphate dehydrogenase [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 489

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 3/95 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ ++ + +   V V+D GQKL GI+T  D+   F +D      + +  +N   +   T
Sbjct: 110 DALDLMGKYKISGVPVID-GQKLVGILTNRDL--RFVEDFTANVTKFMTSENLVTVPVGT 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  +M+ L++H I  L+VVDD  K  G++   D+
Sbjct: 167 SLEESMRHLQKHRIEKLLVVDDAFKLKGLITIKDI 201


>gi|284033897|ref|YP_003383828.1| inosine-5'-monophosphate dehydrogenase [Kribbella flavida DSM
           17836]
 gi|283813190|gb|ADB35029.1| inosine-5'-monophosphate dehydrogenase [Kribbella flavida DSM
           17836]
          Length = 504

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  +  + R   V VVD    L GI+T  D+   F  DL+   V +VM K P +  +  
Sbjct: 116 EADALCGQYRISGVPVVDAAGVLVGIVTNRDM--RFENDLSR-PVREVMTKQPLITGKQG 172

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    AM LL +H +  L +VD+  K  G++   D ++
Sbjct: 173 ISADDAMALLSKHKVEKLPLVDEAGKLTGLITLKDFVK 210


>gi|153004389|ref|YP_001378714.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027962|gb|ABS25730.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp.
           Fw109-5]
          Length = 487

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 82/194 (42%), Gaps = 22/194 (11%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIAL--LESRNFSE 201
           D VL LP E +  P  +              P  S+ M       +AIA+  +    F  
Sbjct: 14  DDVLLLPSESDVLPKAVETSTRLSRNIQINIPIVSSAMDTVTEARMAIAMASVGGLGFVH 73

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +  V     ++  +    S V+  GD I  ++   P+  A+ ++ E     + VV +G 
Sbjct: 74  KNLTVEQQAAEVHKVKKYESAVV--GDPI-TIEPNAPIHRAVALMRENGISGIPVVQKG- 129

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T  D+   F K+L    VE VM +      E   +  A  LL +H I  L+VV+
Sbjct: 130 RLVGILTNRDL--RFEKNLEQ-RVEQVMTRELVTAREGVTIEEAKDLLHRHRIEKLLVVN 186

Query: 322 DCQKAIGIVHFLDL 335
           +  +  G++   D+
Sbjct: 187 EAFELRGLITIKDI 200


>gi|329115348|ref|ZP_08244102.1| Inosine-5'-monophosphate dehydrogenase [Acetobacter pomorum DM001]
 gi|326695327|gb|EGE47014.1| Inosine-5'-monophosphate dehydrogenase [Acetobacter pomorum DM001]
          Length = 501

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 256 VVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHN 313
           VV+ G QKL GI+T  D    F  D N   V ++M K+  + +++ +    A QLL +H 
Sbjct: 136 VVEPGTQKLVGILTNRDA--RFAVDPNQ-PVSELMTKDRLITVKNGVDADTARQLLHKHR 192

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           I  L+VVDD  + +GI+   D+
Sbjct: 193 IEKLLVVDDADRCVGIITVKDM 214


>gi|262163734|ref|ZP_06031474.1| transcriptional regulator RpiR family [Vibrio mimicus VM223]
 gi|262027714|gb|EEY46379.1| transcriptional regulator RpiR family [Vibrio mimicus VM223]
          Length = 282

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 77/174 (44%), Gaps = 6/174 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLA 87
           ++IA+K   +  ++ L    + +F    E I  I+   RV I GIG S   G  LA  L 
Sbjct: 96  AVIAQKLVQTKTDAMLHTTNALRFDEFSEAINWIQQAARVQIIGIGGSALTGKDLAFKLL 155

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +     +         +   D++I +S+SG   E+      A++    +IA+T+ 
Sbjct: 156 KLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTP 215

Query: 148 NKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           NK+ +   AD+ L T+  E +     +A  T+   Q  + D + I L + R  S
Sbjct: 216 NKNRLRELADLALDTIADESQHRSSAIASRTA---QNVLTDLIFITLAQQRETS 266


>gi|213026754|ref|ZP_03341201.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 43

 Score = 41.6 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/32 (53%), Positives = 24/32 (75%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           L +GDALA+A++++R F+E DF   HP G LG
Sbjct: 5   LMMGDALAMAVMQARGFNEEDFARSHPAGALG 36


>gi|302382745|ref|YP_003818568.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193373|gb|ADL00945.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 485

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 71/175 (40%), Gaps = 31/175 (17%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P TS+ M       LAIA+ ++              G LG L    + V    D +  VK
Sbjct: 41  PLTSSAMDTVTESRLAIAMAQA--------------GGLGILHRNMT-VQEQADQVRTVK 85

Query: 235 I--GCPLIDAITILSEKRFGCV------------AVVDEGQKLKGIITEGDIFRNFHKDL 280
                 +I+ +TI  E   G V             VVD G KL GI+T  D+   F  D 
Sbjct: 86  RYESGMVINPVTIRPETTLGEVRQIVANRKISGFPVVDAGGKLVGILTNRDM--RFDTDP 143

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NT + + +   +   + E      A  LLR   I  ++VVD+  +A G++   D+
Sbjct: 144 NTRAADLMTTGDLVTVREGAGRDEARTLLRTRKIERVIVVDEDYRATGLITMKDI 198


>gi|313116905|ref|YP_004038029.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
 gi|312294857|gb|ADQ68893.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
          Length = 392

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 2/125 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  SDVM S +++  V     + D +  +  +R     V+  G  L G++T  D      
Sbjct: 247 ITVSDVMTSEENLETVSEETTISDLLARMFTERHIGYPVMRNG-DLVGMVTLDDAGAIEE 305

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +   VEDVM   P     D     A Q ++Q+ +  L VV+D    +GI+   D++R
Sbjct: 306 VERDAYRVEDVMSTEPHTTSPDADAMTAFQQMQQNGVGRLPVVNDAGDLVGIISRTDMMR 365

Query: 338 -FGII 341
            F +I
Sbjct: 366 AFNVI 370


>gi|227518387|ref|ZP_03948436.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX0104]
 gi|307288563|ref|ZP_07568547.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|227074065|gb|EEI12028.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX0104]
 gi|306500470|gb|EFM69803.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|315165543|gb|EFU09560.1| CBS domain pair protein [Enterococcus faecalis TX1302]
          Length = 162

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 37/108 (34%), Positives = 55/108 (50%), Gaps = 11/108 (10%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTLSVEDVM 289
           PL  A  +LS+ R+  + V+D+G +  G+I   D+          +F K LN  +V DVM
Sbjct: 32  PLSHAALVLSKVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEK-LNEFTVADVM 90

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  VI E   L   + LL   + S L VVDD Q+  GI+   ++L+
Sbjct: 91  EVNVPVIGESWDLEEVLHLLV--DASFLPVVDDNQRFKGIITRKEILK 136


>gi|146312689|ref|YP_001177763.1| putative DNA-binding transcriptional regulator [Enterobacter sp.
           638]
 gi|145319565|gb|ABP61712.1| transcriptional regulator, RpiR family [Enterobacter sp. 638]
          Length = 282

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++TGIG SG +   L   L   G  +       A    +  +  DDL++ +S+SG   
Sbjct: 134 RIILTGIGASGLVARNLGWKLTKIGFNAMSEQDMHALLSTVQAMAPDDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A R    ++AIT    + +   A   L    E ++       +TSA  Q+ +
Sbjct: 194 EINLAADEALRVGGKILAITGFTPNALQQRATRCLYTIAEEQATRSAAISSTSA--QMML 251

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 252 TDLLFVALVQ 261


>gi|326804264|ref|YP_004322082.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651490|gb|AEA01673.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
          Length = 209

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVIL- 297
           +AIT +     G + V DE Q+L+G+++  D+ R+      T S  V  +M + P +++ 
Sbjct: 95  EAITTMFLYDNGSLYVTDEDQRLQGLVSRKDLLRSLATKGQTESPAVALIMTRMPNIVVV 154

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            +DTL+  A +LL  H +  L VV++ Q
Sbjct: 155 EKDTLVLEAGKLLVDHKVDSLPVVNNRQ 182


>gi|311694145|gb|ADP97018.1| cyclic nucleotide-binding domain (cNMP-BD) protein [marine
           bacterium HP15]
          Length = 638

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKV 295
           P+  A+  + E   G + V DE +   GI T  D+     +    L   ++ VM KNP  
Sbjct: 190 PVRKAVARMHENNVGSIIVTDENRIPTGIFTLRDLRTMIAEGTGPLDTPIQQVMTKNPCC 249

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +        A  L+ +H+ + L V+DD +K IG+V   DL 
Sbjct: 250 LPSHADAFEAAMLMAEHHFAHLCVIDDDRKLIGVVSERDLF 290


>gi|224372738|ref|YP_002607110.1| inosine 5'-monophosphate dehydrogenase [Nautilia profundicola AmH]
 gi|223588344|gb|ACM92080.1| inosine-5'-monophosphate dehydrogenase [Nautilia profundicola AmH]
          Length = 482

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ I++  R   V VVD   KL GI+T  D+   F K+  T  V+D+M   P +  ++ +
Sbjct: 108 ALDIMATYRISGVPVVDRDGKLVGILTNRDL--RFEKN-TTRFVKDLMTPMPLITAKEGI 164

Query: 302 -LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A  +L QH I  L ++DD     G++   D+ +
Sbjct: 165 SLEEAEDILHQHKIEKLPIIDDNGYLKGLITIKDIQK 201


>gi|84515211|ref|ZP_01002573.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
 gi|84510494|gb|EAQ06949.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
          Length = 78

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 3/79 (3%)

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+    L+  + E VM  NP  +    L   A+ ++    I+ L  +D   
Sbjct: 1   GIVTDGDLRRHMQGLLDHTAGE-VMSANPTTVSPHALAEEAVNIMNSRKITCLFALDPAN 59

Query: 325 --KAIGIVHFLDLLRFGII 341
             K  GI+H  D LR GI+
Sbjct: 60  PGKVTGILHIHDCLRAGIV 78


>gi|295097906|emb|CBK86996.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 282

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+TGIG SG +       L   G  +       A    +  +  DDL++ +S+SG   
Sbjct: 134 RIVLTGIGASGLVARNFGWKLTKIGYNAIVEQDMHALLATVQAMDPDDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A R    ++AIT  + + +   A   L    E ++       +TSA  Q+ +
Sbjct: 194 EINMATDEALRVGGKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTSA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|302869479|ref|YP_003838116.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315504058|ref|YP_004082945.1| transcriptional regulator, rpir family [Micromonospora sp. L5]
 gi|302572338|gb|ADL48540.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315410677|gb|ADU08794.1| transcriptional regulator, RpiR family [Micromonospora sp. L5]
          Length = 304

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 64/136 (47%), Gaps = 9/136 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDD 113
           VE I A  GR+ + G G SG + S     L   G  +F+   VH A  S   LG   R D
Sbjct: 140 VEAIGA-AGRIDVYGAGASGFVASDFQQKLHRIGRIAFYFPDVHTALTSAALLG---RGD 195

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           + + +S +G++ ++  +L  AR      +A+T+  +S +   AD VLT      +   G 
Sbjct: 196 VAVGISHTGTTSDVIEVLEQARARGATTVALTNFPRSPITEVADHVLTTAARETTYRSGA 255

Query: 174 APTTSAIMQLAIGDAL 189
             T S + QL + D L
Sbjct: 256 --TASRLAQLTVVDCL 269


>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
 gi|319765647|ref|YP_004131148.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
 gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
 gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
          Length = 148

 Score = 41.6 bits (96), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 55/100 (55%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI     +  KD +T+ V +VM    +V+ 
Sbjct: 28  EAAQIMSQKNIGALPVVENGQ-VKGMITDRDITLRVSSQGKDPSTVKVAEVMTN--QVVT 84

Query: 298 EDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               + V  A  ++ QH +  L +V++ Q   GIV   D+
Sbjct: 85  GTPNMNVQEAANVMAQHQVRRLPIVENNQLQ-GIVALGDI 123


>gi|312135969|ref|YP_004003307.1| putative signal transduction protein with cbs domains
           [Caldicellulosiruptor owensensis OL]
 gi|311776020|gb|ADQ05507.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor owensensis OL]
          Length = 123

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 248 EKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTV 304
           +KR   VAV VDE   LKGII + DI+R   +     T  VE  M K      ++  +  
Sbjct: 27  QKRKKSVAVIVDESDFLKGIIVKADIYRFLSQPGHFETYPVELAMTKAVITADKNDDIKD 86

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +LLR+++IS + VVDD  K IG++   D++ + I
Sbjct: 87  VAKLLRENDISAVPVVDDG-KVIGLIGLEDIVDYFI 121


>gi|52549167|gb|AAU83016.1| conserved hypothetical protein [uncultured archaeon GZfos26B2]
          Length = 496

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 1/111 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + +  + +   + +A  ++ E +F  + V+ E   L GI+T  DI +   +  +T +V  
Sbjct: 383 EDVRTISVHAEIKEAAELIIEGKFNHLPVLSEDGALVGIVTSWDISKAVARG-DTGTVRS 441

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            M         D  + +A++ + +H IS L V+D  +K IG+V   DL + 
Sbjct: 442 AMTGRVVTSSPDEFVEIAVRKMERHKISALPVIDPNRKVIGMVTSGDLNKL 492


>gi|293368363|ref|ZP_06614989.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317495|gb|EFE57915.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 286

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 128 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 187

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 188 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 246

Query: 187 DAL 189
           D L
Sbjct: 247 DIL 249


>gi|283835452|ref|ZP_06355193.1| transcriptional regulator [Citrobacter youngae ATCC 29220]
 gi|291068633|gb|EFE06742.1| transcriptional regulator [Citrobacter youngae ATCC 29220]
          Length = 274

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/128 (25%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   +++D L++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKDTLVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALL 194
             L + LL
Sbjct: 240 VMLLVELL 247


>gi|251811980|ref|ZP_04826453.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251804489|gb|EES57146.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 286

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 128 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 187

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 188 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 246

Query: 187 DAL 189
           D L
Sbjct: 247 DIL 249


>gi|223985869|ref|ZP_03635908.1| hypothetical protein HOLDEFILI_03214 [Holdemania filiformis DSM
           12042]
 gi|223962165|gb|EEF66638.1| hypothetical protein HOLDEFILI_03214 [Holdemania filiformis DSM
           12042]
          Length = 298

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 23/131 (17%)

Query: 60  IKAIK--GRVVITGIGKSGHIG----SKLASTLAST--------GTPSFFVHAAEASHGD 105
           IKA++  GR++  G G SG +G    ++   T  +T        G P  F+ A E +  D
Sbjct: 59  IKALRSGGRLIYMGAGTSGRLGVIDSAECMPTFGTTYEVVGLLAGGPDAFLTAVEGAEDD 118

Query: 106 LGM---------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +         +T  D++  ++ SG +  +   L YAR      +++     S V  HA
Sbjct: 119 AELGKQDLVDQKLTEKDVVCGIAASGRTPYVIGGLDYARSIGATAVSVACNKNSEVGKHA 178

Query: 157 DIVLTLPKEPE 167
           D+ + +   PE
Sbjct: 179 DVAIEVDAGPE 189


>gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
 gi|6016372|sp|O67820|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
          Length = 490

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 30/202 (14%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P+  E  PH +              P  SA M       LAIAL       E  
Sbjct: 15  DDVLLVPQYSEVLPHEVDVSTYLTKRIKLNIPIVSAAMDTVTEARLAIALA-----REGG 69

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSI---PL-VKIGCPLIDAITILSEKRFGCVAVVDE 259
             ++H    +         V  S   +   P+ VK    + +A+ I+++ +   V VVDE
Sbjct: 70  IGIIHRNLPIKKQAEEVEKVKKSESGMIINPVTVKPDTRVKEALDIMAKYKISGVPVVDE 129

Query: 260 GQKLKGIITEGDIF----RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            +KL GI+T  D+      ++ K ++    ++ +I  P    E   L  A ++ R++ I 
Sbjct: 130 ERKLIGILTNRDLRFIKPEDYSKPVSEFMTKENLITAP----EGITLDEAEEIFRKYKIE 185

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L +VD   K  G++   D+++
Sbjct: 186 KLPIVDKEGKIKGLITIKDIVK 207


>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
 gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
          Length = 275

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 12/113 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----------NFHKDLNTLSVED 287
           ++DA  +L  ++   + VV  G KL GI+T   + R               DL+  ++ D
Sbjct: 23  IVDARRLLDVRKIRHLPVVSAG-KLVGIVTRRGLLRADLPAVSDETWEIAFDLHHQTIRD 81

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +M  NP  +  +T +  A +++ ++ I+ L V++D ++ +GI+   D+ RF I
Sbjct: 82  IMTVNPITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIFRFII 134



 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPK 294
             P+  A  ++ E +   + V+++ ++L GI+T  DIFR   ++L   L V + M +   
Sbjct: 93  NTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIFRFIIEELEEPLVVAEYMSEEVV 152

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+  DT L  A +L+    I  L V+++  + +G+V   DL+
Sbjct: 153 VVEPDTSLLEAHRLMGTKRIRALPVLEE-DRLVGLVTRTDLV 193


>gi|294497648|ref|YP_003561348.1| RpiR family transcriptional regulator [Bacillus megaterium QM
           B1551]
 gi|294347585|gb|ADE67914.1| transcriptional regulator, RpiR family [Bacillus megaterium QM
           B1551]
          Length = 284

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 48/84 (57%), Gaps = 1/84 (1%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           ++DD+++ +S+SG + E+  +L  A+   +  I++T   +S V+  ADI L      E+ 
Sbjct: 176 SKDDVVVGISFSGETPEVSNVLSLAKNRGVKTISLTKYGQSTVSSLADICLYTSCSQEA- 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIAL 193
           P   A T+S + QL + D L +++
Sbjct: 235 PFRSAATSSRLAQLYVIDVLFLSI 258


>gi|291543353|emb|CBL16462.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus sp. 18P13]
          Length = 489

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ + +   V +VD   KL GIIT  D+   F  D NT  + DVM K+  V     
Sbjct: 112 DADELMGKYKISGVPIVDNEGKLVGIITNRDM--RFMTDFNT-RIADVMTKDNLVTAPVG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++LR H I  L +VD      G++   D+ +
Sbjct: 169 TTLQEAQEILRAHKIEKLPLVDQDGYLKGLITIKDIEK 206


>gi|134045621|ref|YP_001097107.1| signal transduction protein [Methanococcus maripaludis C5]
 gi|132663246|gb|ABO34892.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C5]
          Length = 413

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 41/159 (25%), Positives = 77/159 (48%), Gaps = 15/159 (9%)

Query: 190 AIALLESRNF------SENDFYVLHPGGKL--GTLFVCASDVMHSGDSIPL-VKIGCPLI 240
           A+ ++E+R F       ++D Y++     L   ++     D+M      P  V++   +I
Sbjct: 25  AVGIMENRKFHNLIIEKDDDIYLVTMHDLLLGNSVHQQVEDLMFK----PFCVRMNTQVI 80

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           DA   +         V++E  +L GIIT+ D+ R   +   L  + ++ +M K+P  I  
Sbjct: 81  DAAFEMINSGQRVAPVINENDELIGIITDYDVMRCASQSELLKDVKIDKIMTKSPVTIDI 140

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +  A  L+ ++NI  L+V+D   K IG+V   D+++
Sbjct: 141 DESIGKARSLMMKYNIGRLVVLDADGKPIGMVTEDDIVK 179


>gi|108798138|ref|YP_638335.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium sp. MCS]
 gi|126433797|ref|YP_001069488.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium sp. JLS]
 gi|108768557|gb|ABG07279.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. MCS]
 gi|126233597|gb|ABN96997.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. JLS]
          Length = 517

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVDE   L GIIT  D+   F  D  +  V +VM K P +  ++ +    A+ L
Sbjct: 137 RISGLPVVDERGSLVGIITNRDM--RFEVD-QSKPVSEVMTKAPLITAQEGVSAEAALGL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 194 LRRHKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|15894266|ref|NP_347615.1| CBS domain-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023886|gb|AAK78955.1|AE007614_3 Uncharacterized protein containing two CBS domains [Clostridium
           acetobutylicum ATCC 824]
 gi|325508393|gb|ADZ20029.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 125

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           VK    L DA+ ++         VVD   ++ GI+ + DI+R   ++   +T  VE VM 
Sbjct: 14  VKDSDTLKDALKVMINNTVNSAPVVDNNDEIVGIVVKADIYRFLIEEGHYDTYPVEAVMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +  +T L    ++LR ++I  + +V+D +KAIG+V   DLL +
Sbjct: 74  RKVITVDVNTDLMEVGKILRDNSIFAVPIVED-KKAIGLVTVEDLLDY 120


>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
 gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
          Length = 232

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 81/197 (41%), Gaps = 35/197 (17%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           P+ P + PH  +P  SA  + +I  +   A L  R   ++       G   G+  V   D
Sbjct: 22  PRLP-AGPHVASPGPSARPRTSIRASAVSAALAVRGLPQHASVA---GQSTGSYRV--GD 75

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-------------- 268
           VM   + + +VK    + DA+ +L + R     V+D+   L G+++              
Sbjct: 76  VMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAG 135

Query: 269 --EGDIF-------RNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             E DIF       + FH+    LS      + DVM   P V+ E T L  A +LL    
Sbjct: 136 PAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTK 195

Query: 314 ISVLMVVDDCQKAIGIV 330
              L VVD   K +GI+
Sbjct: 196 YRRLPVVDSSGKLVGII 212


>gi|149184705|ref|ZP_01863023.1| IMP dehydrogenase [Erythrobacter sp. SD-21]
 gi|148832025|gb|EDL50458.1| IMP dehydrogenase [Erythrobacter sp. SD-21]
          Length = 487

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I++  R   + V D   KL GI+T  D+   F ++      E +  +N   +  
Sbjct: 107 LGDAQQIMTANRISGIPVTDRSGKLVGILTNRDV--RFAENPRQPVSELMTTENLATVPL 164

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T    A +LL Q  I  L+VVDD  + +G++   D+
Sbjct: 165 GTSQEEARKLLHQRRIEKLLVVDDGGRCVGLITVKDI 201


>gi|119867234|ref|YP_937186.1| inositol-5-monophosphate dehydrogenase [Mycobacterium sp. KMS]
 gi|119693323|gb|ABL90396.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. KMS]
          Length = 517

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVDE   L GIIT  D+   F  D  +  V +VM K P +  ++ +    A+ L
Sbjct: 137 RISGLPVVDERGSLVGIITNRDM--RFEVD-QSKPVSEVMTKAPLITAQEGVSAEAALGL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 194 LRRHKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|75676579|ref|YP_319000.1| nucleotidyl transferase [Nitrobacter winogradskyi Nb-255]
 gi|74421449|gb|ABA05648.1| Nucleotidyl transferase [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score = 41.6 bits (96), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 2/100 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV 295
            PL++A+  + E     +AVV+   K+ G +T+GD+ R     +     V +VM +NP V
Sbjct: 11  IPLLEALRRIDEGNL-QLAVVERDGKIVGTVTDGDVRRALLNGVGLDTPVNEVMNRNPVV 69

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    A+ L+R+ +I  L +VDD  K I I    DL
Sbjct: 70  APAGISNAAALTLMRRRSIHQLPIVDDHGKVIEIKLIDDL 109


>gi|317498860|ref|ZP_07957145.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893856|gb|EFV16053.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 126

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP---KEPESC 169
           DL+I+ S SG +D L +I   A+   + L  +T   +S +   AD ++ LP   K     
Sbjct: 22  DLLIITSGSGETDALVSIAKKAKESGLYLGLVTMNPQSTLGKMADGMIILPGDSKGNNEE 81

Query: 170 PHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            H + P  S   Q++  I DA+ + L+E+ N +    ++ H
Sbjct: 82  KHSIQPMGSQFEQMSFLIFDAIVLKLMENWNQTSEQMFMRH 122


>gi|23099402|ref|NP_692868.1| hypothetical protein OB1947 [Oceanobacillus iheyensis HTE831]
 gi|22777631|dbj|BAC13903.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 209

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 56/112 (50%), Gaps = 5/112 (4%)

Query: 224 MHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDL 280
           +H    +P+ VK    + DAI+ +  +  G + VVD+   L G+++  D+ R    H+DL
Sbjct: 77  VHEFQQVPVAVKESVSVYDAISTMFLEDVGTLFVVDDHACLTGVLSRKDLLRTSMGHQDL 136

Query: 281 NTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            ++ V  +M + P + +   D LL  A   L    I  L VV D ++ + +V
Sbjct: 137 TSIPVHIIMTRMPNITVCRRDDLLIDAAHNLISKQIDGLPVVKDTERGLEVV 188


>gi|300856862|ref|YP_003781846.1| inosine-5'-monophosphate dehydrogenase [Clostridium ljungdahlii DSM
           13528]
 gi|300436977|gb|ADK16744.1| inosine-5'-monophosphate dehydrogenase [Clostridium ljungdahlii DSM
           13528]
          Length = 484

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA++++S+ R   V +  EG KL GIIT  DI    N+ K ++ +   + +I  P    E
Sbjct: 108 DALSLMSKYRISGVPITVEG-KLVGIITNRDIVFETNYDKKISEVMTREKLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DT +  A ++L+   I  L +VD      G++   D+ +
Sbjct: 163 DTTIEEAKEILKTSKIEKLPLVDKDNNLRGLITIKDIEK 201


>gi|82617163|emb|CAI64070.1| conserved hypothetical protein [uncultured archaeon]
 gi|268323008|emb|CBH36596.1| conserved hypothetical protein, containing CBS domain [uncultured
           archaeon]
          Length = 131

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            P+ + + IL  K    +AV     +  G+I+E DI +   KD + L+ EDVM    + I
Sbjct: 24  TPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKFMDKDWSILTAEDVMSHFVRAI 83

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLR 337
             +T L  A   +++ NI  L+V+         IGI+   D+LR
Sbjct: 84  DPETTLRKAADTMKELNIHRLLVLSLSPAPGVPIGILSASDILR 127


>gi|319935088|ref|ZP_08009529.1| hypothetical protein HMPREF9488_00360 [Coprobacillus sp. 29_1]
 gi|319809983|gb|EFW06360.1| hypothetical protein HMPREF9488_00360 [Coprobacillus sp. 29_1]
          Length = 348

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP--KEP 166
           +  L+IVLS +G S      L  A+   IP IAIT++NKS +A  AD  + +P  KEP
Sbjct: 87  KHKLLIVLSQTGKSIGTLECLQIAKNNYIPTIAITADNKSPIAIQADTHINMPCGKEP 144


>gi|239637976|ref|ZP_04678937.1| CBS domain protein [Staphylococcus warneri L37603]
 gi|239596539|gb|EEQ79075.1| CBS domain protein [Staphylococcus warneri L37603]
          Length = 432

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNI 314
           VV++  KL GI+T  +I      D+    +EDVM K+P  V L +T+ + A  LL    I
Sbjct: 226 VVNKDYKLVGIVTSREIINMNDNDM----IEDVMTKHPISVKLSNTVASCA-HLLIWEGI 280

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            +L V D+ +KA+G+++  D+L+
Sbjct: 281 ELLPVTDNNKKAVGVINRQDVLK 303


>gi|302540275|ref|ZP_07292617.1| inosine-5'-monophosphate dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302457893|gb|EFL20986.1| inosine-5'-monophosphate dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 210

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 1/94 (1%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +L   R G + VVDE  K+ G+IT  D+      +    + + +      V  +DT++  
Sbjct: 89  LLERHRIGGLPVVDEDDKVVGVITGTDLAGAGGVEGAVSAGQRMSRPAVTVRPQDTIVDA 148

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A  + R H +  L VVD+  + IGIV   DLLR 
Sbjct: 149 ARSMAR-HRVERLPVVDEEDRLIGIVTRRDLLRV 181


>gi|296332132|ref|ZP_06874595.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672872|ref|YP_003864543.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150624|gb|EFG91510.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411115|gb|ADM36233.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 305

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAE-------ASHG 104
           GR++ TG G SG +G   A     T             G P  F+ AAE       A   
Sbjct: 67  GRLIYTGAGTSGRLGVMDAVECPPTYSVSPDQVIGIMAGGPKAFLQAAEGIEDSEKAGAE 126

Query: 105 DLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           DL  I  T +D +I ++ SG +      L YAR+     IA+T    S ++  AD  + +
Sbjct: 127 DLKNIQLTSNDTVIAIAASGRTPYAAGALTYARKVGAHTIALTCNENSAISKDADHSIEV 186

Query: 163 PKEPES 168
              PE+
Sbjct: 187 VVGPEA 192


>gi|229547884|ref|ZP_04436609.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
 gi|229306905|gb|EEN72901.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
          Length = 285

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEP 166
           T++D+ I++S+SG++ E   I+  AR F+    P+IAITS+  S +A +A ++L +P   
Sbjct: 181 TKNDVAILVSYSGNTAE---IVNEARIFAEGGTPIIAITSDLNSQLAKYATVILPIP--- 234

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSEN 202
            +  H     ++   QLAI   L +  + + SRNF +N
Sbjct: 235 -NIEHADFKVSTFSSQLAIEYILNVLYSCIFSRNFDKN 271


>gi|218295136|ref|ZP_03495972.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
 gi|218244339|gb|EED10864.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
          Length = 210

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 56/113 (49%), Gaps = 14/113 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------ 284
            P+++AI +L +K+F  + VV +G KL G++T+ D+         TLS            
Sbjct: 18  TPVLEAINLLKQKKFRRLPVVKDG-KLLGLVTDKDLKDAMPSKATTLSVWEMNYLLSKLT 76

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VE+VM K    I  D  L  A  ++ +  I  L V+ +  K +GI+   D+LR
Sbjct: 77  VEEVMAKPVITIGADEPLEKAALIMEEKKIGGLPVM-EGDKLVGIITVTDVLR 128



 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 231 PLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           P++ IG   PL  A  I+ EK+ G + V+ EG KL GIIT  D+ R F
Sbjct: 84  PVITIGADEPLEKAALIMEEKKIGGLPVM-EGDKLVGIITVTDVLRAF 130


>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
 gi|194708182|gb|ACF88175.1| unknown [Zea mays]
 gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
 gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
          Length = 205

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 25/160 (15%)

Query: 188 ALAIALLESRNFSENDFY-VLHPGGKL--GTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +++ A LE R F       VL   GK   G+   C ++     DS+          DA+ 
Sbjct: 40  SVSSARLEDRGFETATVADVLKSKGKSADGSWLWCTTE-----DSV---------YDAVK 85

Query: 245 ILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL-- 297
            +++   G + VV  GQ   + GI+TE D  R      +   +  V D+M +  K+I   
Sbjct: 86  SMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVN 145

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DT +  AMQL+ ++ +  + V+D     +G+V   D++R
Sbjct: 146 PDTKVLQAMQLMTENRVRHIPVIDGT-GMLGMVSIGDVVR 184


>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
 gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
          Length = 153

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V+    + DAI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYSVRKTDLVYDAIKLMAEKGIGALLVMD-GDDIAGIVTERDYARKVVLQERSSRA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D+  K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDNG-KLIGLISIGDLVK 127


>gi|330685789|gb|EGG97423.1| DRTGG domain protein [Staphylococcus epidermidis VCU121]
          Length = 432

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNI 314
           VV++  KL GI+T  +I      D+    +EDVM K+P  V L +T+ + A  LL    I
Sbjct: 226 VVNKDYKLVGIVTSREIINMSDNDM----IEDVMTKHPISVKLSNTVASCA-HLLIWEGI 280

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            +L V D+ +KA+G+++  D+L+
Sbjct: 281 ELLPVTDNNKKAVGVINRQDVLK 303


>gi|258542593|ref|YP_003188026.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633671|dbj|BAH99646.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636730|dbj|BAI02699.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639783|dbj|BAI05745.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642839|dbj|BAI08794.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645894|dbj|BAI11842.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648947|dbj|BAI14888.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651934|dbj|BAI17868.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654991|dbj|BAI20918.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 492

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 5/82 (6%)

Query: 256 VVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHN 313
           VV+ G QKL GI+T  D    F  D N   V ++M K+  + +++ +    A QLL +H 
Sbjct: 127 VVEPGTQKLVGILTNRDA--RFAVDPNQ-PVSELMTKDRLITVKNGVDADTARQLLHKHR 183

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           I  L+VVDD  + +GI+   D+
Sbjct: 184 IEKLLVVDDADRCVGIITVKDM 205


>gi|254786576|ref|YP_003074005.1| CBS domain containing protein [Teredinibacter turnerae T7901]
 gi|237687236|gb|ACR14500.1| CBS domain containing protein [Teredinibacter turnerae T7901]
          Length = 141

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 53/97 (54%), Gaps = 12/97 (12%)

Query: 256 VVDEGQKLKGIITEGDIF------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           +V++   L GI+++ D+             R   ++L  L+V D+M  +   I  DTL+ 
Sbjct: 36  LVEQDDLLVGIVSDRDVLAHLSPFAGTEQERACDRNLLELTVRDIMSDSIITIDPDTLID 95

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            A  LL +++IS L VVD+  + +GI+ + D+L++ +
Sbjct: 96  CASILLLENHISCLPVVDESNRIVGILSWKDILQYHV 132


>gi|118445062|ref|YP_879095.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium novyi NT]
 gi|118135518|gb|ABK62562.1| Glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium novyi NT]
          Length = 378

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           ++ A D++      P+  +G   ++ A  I++E+    + VVD    LKGI T  DI ++
Sbjct: 247 YIKAEDIIIEN---PVKAVGNRTILQASEIMAERHVDSILVVDRNNTLKGIATLKDIRKS 303

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              D   L ++DVM ++   + +D  +   ++++   N+  + VVD+ +K +G++
Sbjct: 304 REND-KKLMLKDVMNRDVVCVNKDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLI 357


>gi|153208947|ref|ZP_01947160.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154707175|ref|YP_001424778.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii Dugway
           5J108-111]
 gi|165924006|ref|ZP_02219838.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 334]
 gi|212218752|ref|YP_002305539.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuK_Q154]
 gi|120575605|gb|EAX32229.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154356461|gb|ABS77923.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii Dugway
           5J108-111]
 gi|165916551|gb|EDR35155.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 334]
 gi|212013014|gb|ACJ20394.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuK_Q154]
          Length = 489

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 24/198 (12%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP   E  P  ++ TT    ++ +   L  A +++   +     +   GG +G L
Sbjct: 11  DDVLLLPNYSEVLPKDVSLTTRLTREITLNIPLLSAAMDTVTEARLAIALAEAGG-IGIL 69

Query: 217 FVCASDVMHSGDSIPLVKIGCPLI-DAITILSEKRFGCVAVVD-----------EGQKLK 264
               S    + +   + K    ++ D IT+  E   G +  +            EG++L 
Sbjct: 70  HKNMSPTYQANEVRKVKKFESGVVFDPITVSPESTIGELKKITSEYNISGLPVVEGEQLI 129

Query: 265 GIITEGDIFRNFHKDL-----NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           GIIT  DI   F  D+     N ++ +D +I     I E       + L RQH +  L+V
Sbjct: 130 GIITSRDI--RFETDMQQKVVNLMTPKDRLI----TIKEGASRDEIINLFRQHRVEKLLV 183

Query: 320 VDDCQKAIGIVHFLDLLR 337
           ++D  +  G++   D+LR
Sbjct: 184 INDRFELRGLITVKDILR 201


>gi|27367316|ref|NP_762843.1| putative signal transduction protein [Vibrio vulnificus CMCP6]
 gi|27358885|gb|AAO07833.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus CMCP6]
          Length = 621

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 56/100 (56%), Gaps = 6/100 (6%)

Query: 226 SGDSIPLVKIGCPLID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
           + ++I +VK+   + D A+ +  ++R  C  V+D G  + G++T+ D+  +     KD++
Sbjct: 162 ASENIAIVKVTDSIRDVALAMCGKQRSSCAVVMD-GNDIVGLVTDRDMTASVVAKEKDVS 220

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              +E VM  NP +I  D  +  A+ L+ Q+NI  L VV+
Sbjct: 221 E-RIESVMTLNPVLIESDAKVIQAISLMLQYNIRCLPVVN 259


>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
 gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
          Length = 185

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVIL 297
           DA+  ++EK+ G + V + G K+ GI+TE D  R      +     +V D+M ++ + + 
Sbjct: 66  DAMKRMAEKQIGALVVTENG-KIVGIVTERDYARKIVLMDRSSKATAVRDIMTRDVRYVR 124

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      M L+ +H +  L V+D   + +G++   DL++
Sbjct: 125 PEDSAQGCMALVTEHRMRHLPVIDGG-RLVGMISIGDLVK 163


>gi|222099316|ref|YP_002533884.1| transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
 gi|221571706|gb|ACM22518.1| transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
          Length = 280

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPH 171
           DL++ +S +G +  +      AR   IP++AIT   KS +A ++D+VL T  KE +    
Sbjct: 179 DLLVAVSHTGETISVVNFARKAREMRIPVVAITGNKKSTLAKYSDVVLVTNTKETKIRTD 238

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
            +   TS I+QL I D +   LL +R+
Sbjct: 239 AM---TSRIVQLVILDTI-YTLLAARD 261


>gi|197337671|ref|YP_002157943.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
 gi|197314923|gb|ACH64372.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
          Length = 619

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 47/86 (54%), Gaps = 12/86 (13%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFR-------NFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
            C  +VDE ++L G+IT+ D+ +       N H  ++++  +++       + ED L+  
Sbjct: 186 SCAFIVDENKRLIGMITDKDMTKRVVAQAKNVHDPISSIMTQEI-----HTVYEDDLVMS 240

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIV 330
           A+QL+ +HNI  + V++  ++  G +
Sbjct: 241 AVQLMMKHNIQNIPVLNHQKQVTGFI 266


>gi|154248338|ref|YP_001419296.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Xanthobacter autotrophicus Py2]
 gi|154162423|gb|ABS69639.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Xanthobacter autotrophicus Py2]
          Length = 607

 Score = 41.6 bits (96), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 94/217 (43%), Gaps = 36/217 (16%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +T D + IV+S SG + +  A L YA+     ++A+ +   S +A  AD+VL +   PE 
Sbjct: 335 LTPDGITIVISQSGETADTLASLRYAKECGQKVVAVVNVPTSTIAREADVVLPILAGPEI 394

Query: 169 CPHGLAPTTSAIMQLAIGDALAIA------LLES-------RNFSE-----NDFYVLHPG 210
              G+A T +   QLA    LA+A      +LE        R F E      +   L P 
Sbjct: 395 ---GVASTKAFTCQLATLACLAVAFGRAKGVLEEADEHKLVRAFMEVPRLMTEALKLSPE 451

Query: 211 GK-LGTLFVCASDVMH--SGDSIPLVKIGCPLIDAITIL-------SEKRFGCVAVVDEG 260
            + L      A DV++   G + PL   G   +  I+ +        E + G +A++DE 
Sbjct: 452 IEVLARTLAKARDVLYLGRGSNYPLALEGALKLKEISYIHAEGYAGGELKHGPIALIDEK 511

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
             +  I     IF     D    ++E+V  +  ++IL
Sbjct: 512 MPVVVIAPHDRIF-----DKTVSNMEEVAARGGRIIL 543


>gi|168002427|ref|XP_001753915.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694891|gb|EDQ81237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 525

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKN 292
           G  + DA   ++ +R     + D    L GIIT+ DI  R   + L    +SV  VM +N
Sbjct: 43  GTTVADACRRMATRRVTAALLTDSNALLCGIITDQDISTRVIAEGLKPEEISVSKVMTRN 102

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  ++ DTL   A+Q + Q     L VV+D +    ++  LD+ +
Sbjct: 103 PVFVMGDTLAVEALQTMVQGKFRHLPVVEDGE----VIALLDITK 143


>gi|15679237|ref|NP_276354.1| inosine-5'-monophosphate dehydrogenase related protein V
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622337|gb|AAB85715.1| inosine-5'-monophosphate dehydrogenase related protein V
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 187

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL--NTLSVEDVMIKN 292
           G  + +A +I++EK+ G + +V    + +G+ITE DI R    +DL  + ++V +VM +N
Sbjct: 23  GISVAEAASIMTEKKVGSI-IVKSNSEPEGLITESDIIRKVVSRDLRASEVTVGEVMTRN 81

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I  D  L+ A +L+ +++I  L VV D    +GI+   D++
Sbjct: 82  LISIEPDRELSEAARLMAKNSIRRLPVVRD-GALVGILTSSDVM 124


>gi|332702752|ref|ZP_08422840.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332552901|gb|EGJ49945.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 223

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 62/120 (51%), Gaps = 16/120 (13%)

Query: 231 PLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNF 276
           P++ IG    ++ A  +L +K    + VVD+  KL GI+++ DI                
Sbjct: 10  PVITIGPDESMMKASKLLKDKNIRRLPVVDDTGKLIGILSDRDIKEASPSKATTLDVHEL 69

Query: 277 HKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  L+ + V+D+M KNP ++  ED++   A+ LL + ++  L +VDD    +GI+   D+
Sbjct: 70  YYLLSEIKVKDIMTKNPVRLKAEDSVEKAAV-LLSEKSLGGLPIVDDNDSVVGIITEKDM 128


>gi|282875273|ref|ZP_06284146.1| SIS domain protein [Staphylococcus epidermidis SK135]
 gi|281296038|gb|EFA88559.1| SIS domain protein [Staphylococcus epidermidis SK135]
 gi|329733903|gb|EGG70227.1| SIS domain protein [Staphylococcus epidermidis VCU028]
          Length = 290

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 132 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 192 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|254496237|ref|ZP_05109131.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
 gi|254354542|gb|EET13183.1| conserved hypothetical protein [Legionella drancourtii LLAP12]
          Length = 150

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 3/89 (3%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRN-FHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G V VVD+ QKL G+++E DI R+  H+  +L T  V DV+ K+  ++  + ++  AMQ
Sbjct: 41  IGAVVVVDKHQKLLGMVSERDIVRSCLHQCVNLETGKVADVLYKDVTILSPNDVVEKAMQ 100

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +     +++ D+  + I I+   DLL
Sbjct: 101 AMTKTKRRHILIRDENDEFIAILSIGDLL 129


>gi|254517984|ref|ZP_05130040.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226911733|gb|EEH96934.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 284

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 49/94 (52%), Gaps = 3/94 (3%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           + ++D+ I++S+SG ++E+       ++   P+IAIT   +S +A  AD  L +      
Sbjct: 177 MEKNDVAIIISYSGFTEEMIKCANIVKKIGAPIIAITRSEESPIAKIADYKLLVAATEHV 236

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
              G    +S I QL I D L IA + +RN+  N
Sbjct: 237 FREG--AISSRIAQLNIIDILYIAFV-NRNYDSN 267


>gi|329889245|ref|ZP_08267588.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
           11568]
 gi|328844546|gb|EGF94110.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
           11568]
          Length = 486

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L + + I+  K+     VVD +  KL G++T  D+   F  DLN L   D+M     + L
Sbjct: 104 LGEVLQIVERKKITGFPVVDPKSGKLVGMLTNRDM--RFETDLN-LKAADLMTTGELITL 160

Query: 298 ED--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +       A +LLR   I  ++VVDD  +A+G++   D+ +
Sbjct: 161 REGSAGREAARELLRTRKIERVIVVDDAYRAVGLITMKDIQK 202


>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
 gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MC40-6]
          Length = 153

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLIGLISIGDLVK 127


>gi|29654639|ref|NP_820331.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 493]
 gi|161829973|ref|YP_001597187.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 331]
 gi|212212278|ref|YP_002303214.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuG_Q212]
 gi|29541907|gb|AAO90845.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 493]
 gi|161761840|gb|ABX77482.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 331]
 gi|212010688|gb|ACJ18069.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuG_Q212]
          Length = 489

 Score = 41.6 bits (96), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 49/198 (24%), Positives = 84/198 (42%), Gaps = 24/198 (12%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP   E  P  ++ TT    ++ +   L  A +++   +     +   GG +G L
Sbjct: 11  DDVLLLPNYSEVLPKDVSLTTRLTREITLNIPLLSAAMDTVTEARLAIALAEAGG-IGIL 69

Query: 217 FVCASDVMHSGDSIPLVKIGCPLI-DAITILSEKRFGCVAVVD-----------EGQKLK 264
               S    + +   + K    ++ D IT+  E   G +  +            EG++L 
Sbjct: 70  HKNMSPTYQANEVRKVKKFESGVVFDPITVSPESTIGELKKITSEYNISGLPVVEGEQLI 129

Query: 265 GIITEGDIFRNFHKDL-----NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           GIIT  DI   F  D+     N ++ +D +I     I E       + L RQH +  L+V
Sbjct: 130 GIITSRDI--RFETDMQQKVVNLMTPKDRLI----TIKEGASRDEIINLFRQHRVEKLLV 183

Query: 320 VDDCQKAIGIVHFLDLLR 337
           ++D  +  G++   D+LR
Sbjct: 184 INDRFELRGLITVKDILR 201


>gi|329930211|ref|ZP_08283824.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. HGF5]
 gi|328935233|gb|EGG31714.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. HGF5]
          Length = 485

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++ + R   V +VDE  KL GI+T  D+   F  D NT+  E +  +N       T
Sbjct: 110 DAEKLMGKFRISGVPIVDENNKLIGILTNRDL--RFVHDYNTVISEVMTSENLVTAPVGT 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A  +L++H I  L +VDD     G++   D+
Sbjct: 168 TLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDI 202


>gi|319651833|ref|ZP_08005958.1| hypothetical protein HMPREF1013_02570 [Bacillus sp. 2_A_57_CT2]
 gi|317396485|gb|EFV77198.1| hypothetical protein HMPREF1013_02570 [Bacillus sp. 2_A_57_CT2]
          Length = 439

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V   D++        +K    + D +T   E       VVD   K++G++T  DI  + 
Sbjct: 188 IVLVEDILTPLKEAIFLKTTDTIADWLTYNRETGHSRFPVVDSNLKVQGVVTSKDIMGH- 246

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D  TL +E +M KNP  +   T +  +  ++    I +L VVD+  K  GIV   D+L
Sbjct: 247 --DKETL-IEKIMTKNPMTVGGKTSVASSSHMMVWEGIELLPVVDEANKLEGIVSRQDVL 303

Query: 337 R 337
           +
Sbjct: 304 K 304


>gi|317121121|ref|YP_004101124.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
           DSM 12885]
 gi|315591101|gb|ADU50397.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
           DSM 12885]
          Length = 549

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           DA+ +++      V +VD    L GIIT  D+   F ++L+   + +VM +   V   E 
Sbjct: 171 DALQLMARYHISGVPIVDGDGVLVGIITNRDV--RFEENLDR-PIAEVMTREGLVTAPEG 227

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A +++RQH I  L +VD   +  G++   D+
Sbjct: 228 TTLARAKEIMRQHKIEKLPLVDGAGRLRGLITIKDI 263


>gi|304385980|ref|ZP_07368321.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
 gi|304327903|gb|EFL95128.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
          Length = 278

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTP---SFFVH--AAEASHGDLGMITRDDLIIVLSWS 121
           V   GIG S  +   L       G P   +  VH  AAE S G         +++++S S
Sbjct: 131 VYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAEMSKGR-------GVVVLISNS 183

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + E   +L  AR   +P++AIT    S +A  + +VL      E      A TTS + 
Sbjct: 184 GETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRSAATTSLMA 243

Query: 182 QLAIGDALAIALLE 195
           QL + D L  + L+
Sbjct: 244 QLYVVDLLYYSFLK 257


>gi|254672249|emb|CBA05245.1| putative regulatory protein [Neisseria meningitidis alpha275]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++  D+++ +S +GSS EL   +  A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLSDQDVLVAISNTGSSIELLDAVSIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|24214311|ref|NP_711792.1| nucleotidyl transferase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658020|ref|YP_002106.1| nucleoside-diphosphate-sugar pyrophosphorylase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24195234|gb|AAN48810.1| nucleotidyl transferase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601261|gb|AAS70743.1| nucleoside-diphosphate-sugar pyrophosphorylase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 351

 Score = 41.2 bits (95), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+     L DAI IL ++    V +VDE +KL G +T+GD+ R   ++    +SV +VM 
Sbjct: 8   LINSDLSLQDAIKILDKEALRIVLIVDENKKLLGTLTDGDVRRALMQNKGLAISVNEVMS 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             PKV   +      +  + ++ +  L +VD+    +G+
Sbjct: 68  SKPKVAHANWTKERMLLEMEKYELLHLPIVDEQGILVGL 106


>gi|251793577|ref|YP_003008306.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           aphrophilus NJ8700]
 gi|247534973|gb|ACS98219.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           aphrophilus NJ8700]
          Length = 304

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 25/142 (17%)

Query: 52  QFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFV----------- 96
           Q   AVE+I A     GR+V  G G SG +G   AS    T G PS  V           
Sbjct: 54  QIAQAVERIVAAFQAGGRLVYMGAGTSGRLGVLDASECPPTFGVPSSMVVGLIAGGETAL 113

Query: 97  -HAAEASHGDLGM---------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            +A E +  +L            +R D+++ ++ SG +  +   L YA++     +++ S
Sbjct: 114 RNAVEGAEDNLAAGEQDLRHINFSRKDVLVGIAASGRTPYVIGGLNYAKQLGATTVSLVS 173

Query: 147 ENKSVVACHADIVLTLPKEPES 168
              +V++  ADI +T    PE+
Sbjct: 174 NPNAVMSDIADIAITTAVGPET 195


>gi|27468809|ref|NP_765446.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           ATCC 12228]
 gi|27316357|gb|AAO05532.1|AE016750_137 transcription regulator RpiR family [Staphylococcus epidermidis
           ATCC 12228]
 gi|329738037|gb|EGG74259.1| SIS domain protein [Staphylococcus epidermidis VCU045]
          Length = 290

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 132 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 192 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|294507509|ref|YP_003571567.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
 gi|294343837|emb|CBH24615.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
          Length = 508

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  +++    G + VVDE  KL GI+T  D+      D     + ++M  +  V + 
Sbjct: 120 VADARNMMAHYSIGGIPVVDESDKLVGIVTNRDVRFELEGD---TPIREMMTADDLVTVP 176

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A+++L+ H +  L VVD+     G++ F D+ +
Sbjct: 177 VGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRK 216


>gi|332704336|ref|ZP_08424424.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554485|gb|EGJ51529.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 485

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 50/175 (28%), Positives = 80/175 (45%), Gaps = 24/175 (13%)

Query: 175 PTTSAIMQLAIGDALAIALLES-------RNFS-ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SA M       +AIA+          +N S E+  Y      ++G +    S ++H 
Sbjct: 43  PIISAAMDTVTESGMAIAMARQGGVGVIHKNLSIEDHVY------EIGKVKKSESGMIHD 96

Query: 227 GDSI-PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +I P + +G     A+ ++ E R   + VV EG +L GI+T  D+   F  D+++  V
Sbjct: 97  PVTISPELTVG----QALDLMGEYRISGLPVV-EGDRLVGILTNRDV--RFVTDMSS-KV 148

Query: 286 EDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            DVM  K    + E T L  A   L +  I  L+VVD+  K  G++   D+ + G
Sbjct: 149 ADVMTSKRLVTVPEGTTLEEAKMHLHEARIEKLLVVDENNKLKGLITIKDIEKKG 203


>gi|254413927|ref|ZP_05027696.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
           [Microcoleus chthonoplastes PCC 7420]
 gi|196179524|gb|EDX74519.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
           [Microcoleus chthonoplastes PCC 7420]
          Length = 926

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE  +L GII+  DI    H  L    V+  M +N K I   T L     
Sbjct: 366 RYGHSGLSVVDEHDQLIGIISRRDIDLALHHGLGHAPVKGYMTRNLKTITPQTSLPEIES 425

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  ++I  L V+++ Q  +GIV   D+LR
Sbjct: 426 LMVTYDIGRLPVLENGQ-LVGIVTRTDVLR 454


>gi|158521897|ref|YP_001529767.1| inosine-5'-monophosphate dehydrogenase [Desulfococcus oleovorans
           Hxd3]
 gi|158510723|gb|ABW67690.1| inosine-5'-monophosphate dehydrogenase [Desulfococcus oleovorans
           Hxd3]
          Length = 485

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 83/195 (42%), Gaps = 18/195 (9%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-- 214
           D VL +P   +  P  +  TT   ++L++   +  A +++   S     +   GG LG  
Sbjct: 12  DDVLLIPNYSDVLPDDVNTTTRLTVELSVNIPIVSAAMDTVTESATAISMARAGG-LGFI 70

Query: 215 ---------TLFVCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKL 263
                     + V       SG  +  V  G   P+   ++++ E     V VV +G KL
Sbjct: 71  HRNMSIEAQAIEVGKVKKSESGMIVDPVTTGPNEPISAVLSLMKEYNISGVPVV-QGDKL 129

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T  D+   F  DL+   V +VM      + E   L  + +LL +H I  L+VVD  
Sbjct: 130 VGIVTNRDL--RFEGDLDR-KVSEVMTSKLITVPEGITLEESKELLHRHKIEKLLVVDKK 186

Query: 324 QKAIGIVHFLDLLRF 338
            +  G++   D+ + 
Sbjct: 187 GRLAGMITMKDIEKL 201


>gi|20090672|ref|NP_616747.1| hypothetical protein MA1821 [Methanosarcina acetivorans C2A]
 gi|19915720|gb|AAM05227.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 500

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM   D I  +K    + DA   + E  F  +AVV +  +L GI+T  DI +   +++ 
Sbjct: 382 DVM--ADFIVTIKKNQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIF 439

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             SVE VM K       +  + +A + L ++ +S + V+D  +K +GI+
Sbjct: 440 D-SVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDTQRKVLGII 487


>gi|148254245|ref|YP_001238830.1| hypothetical protein BBta_2791 [Bradyrhizobium sp. BTAi1]
 gi|146406418|gb|ABQ34924.1| hypothetical protein BBta_2791 [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 11/97 (11%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLSVEDVMIKNPKVILEDT 300
           F    VV E  ++ GI+T+ DI R F          + DL   +V  VM      +  DT
Sbjct: 38  FNTYPVV-ENDEVIGIVTKFDILRCFAFTPNQMLPRYSDLMDRTVATVMTSEFIYVRPDT 96

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LT  +QL+ +H I  L V D   + +GIV   D++R
Sbjct: 97  KLTRVLQLMVEHRIRSLPVTDGNNRLVGIVAREDIVR 133


>gi|222824158|ref|YP_002575732.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100]
 gi|222539380|gb|ACM64481.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100]
          Length = 483

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED- 299
           +A+ +++E R   V VVDE + L GI+T  D+   F  + + L VE+VM K P +  +  
Sbjct: 107 EALELMAEYRISGVPVVDENKTLIGILTNRDL--RFETNFDNL-VENVMTKMPLITAKKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L  A ++   + +  L +VD+     G++   DL +
Sbjct: 164 STLDDAERIFSTNKVEKLPIVDENNHLEGLITIKDLKK 201


>gi|15672202|ref|NP_266376.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis Il1403]
 gi|116511049|ref|YP_808265.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|281490708|ref|YP_003352688.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis KF147]
 gi|12723077|gb|AAK04318.1|AE006260_1 IMP dehydrogenase [Lactococcus lactis subsp. lactis Il1403]
 gi|116106703|gb|ABJ71843.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|281374477|gb|ADA63998.1| Inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis KF147]
 gi|326405799|gb|ADZ62870.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis CV56]
          Length = 493

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           +A  +++  R   V +VD  E +KL GIIT  D+    ++++ +  +   + +I  P   
Sbjct: 112 EAENLMATYRISGVPIVDTLENRKLVGIITNRDLRFITDYNQQIKNMMTSENLITAPV-- 169

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++L++H I  L +VD+  K  G++   D+ R
Sbjct: 170 --GTTLDTAARILQEHKIEKLPLVDEAGKLAGLITIKDIER 208


>gi|125623107|ref|YP_001031590.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124491915|emb|CAL96836.1| inositol-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300069854|gb|ADJ59254.1| inosine 5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 493

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           +A  +++  R   V +VD  E +KL GIIT  D+    ++++ +  +   + +I  P   
Sbjct: 112 EAENLMATYRISGVPIVDTLENRKLVGIITNRDLRFITDYNQQIKNMMTSENLITAPV-- 169

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++L++H I  L +VD+  K  G++   D+ R
Sbjct: 170 --GTTLDTAARILQEHKIEKLPLVDEAGKLAGLITIKDIER 208


>gi|269839704|ref|YP_003324396.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Thermobaculum terrenum ATCC BAA-798]
 gi|269791434|gb|ACZ43574.1| Glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Thermobaculum terrenum ATCC BAA-798]
          Length = 346

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 49  LSFQFHCAVEKIKAIKGR------VVITGIGKSGH-------IGSKLASTLASTGTPSFF 95
           LS      +E+++ I G       VVI   G S H       + S LA    +  TPS +
Sbjct: 18  LSSLLEWELERVEGITGEIPEFNYVVIAARGSSDHAATYAQYVWSSLAGFPVALATPSLY 77

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                    D        L++ +S SG S ++ A+L   RR   P +AIT+   S +A  
Sbjct: 78  TLYQTPPRLD------GALVVGVSQSGQSPDIVAVLEEGRRQGRPTLAITNAPDSPLANT 131

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           AD V+ +   PE         T+ ++ +A+  AL
Sbjct: 132 ADWVIPIHAGPERSVAATKTYTAQLLVMALLGAL 165


>gi|57867776|ref|YP_189462.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis RP62A]
 gi|57638434|gb|AAW55222.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus epidermidis RP62A]
 gi|329726442|gb|EGG62905.1| SIS domain protein [Staphylococcus epidermidis VCU144]
          Length = 290

 Score = 41.2 bits (95), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 132 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 192 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|121635093|ref|YP_975338.1| putative transcriptional regulator [Neisseria meningitidis FAM18]
 gi|120866799|emb|CAM10554.1| putative transcriptional regulator [Neisseria meningitidis FAM18]
          Length = 294

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 113 AAASLLGERRFLK--ESELENAIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 161

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++  D+++ +S +GSS EL   +  A+   
Sbjct: 162 FRFGMSTVAYVDTHTQLMAAS--------VLSDQDVLVAISNTGSSIELLDAVSIAKENG 213

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 214 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 265


>gi|261403950|ref|YP_003240191.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. Y412MC10]
 gi|261280413|gb|ACX62384.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. Y412MC10]
          Length = 485

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++ + R   V +VDE  KL GI+T  D+   F  D NT+  E +  +N       T
Sbjct: 110 DAEKLMGKFRISGVPIVDENNKLIGILTNRDL--RFVHDYNTVISEVMTSENLVTAPVGT 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A  +L++H I  L +VDD     G++   D+
Sbjct: 168 TLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDI 202


>gi|119387182|ref|YP_918237.1| signal-transduction protein [Paracoccus denitrificans PD1222]
 gi|119377777|gb|ABL72541.1| putative signal-transduction protein with CBS domains [Paracoccus
           denitrificans PD1222]
          Length = 145

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
           M +   I  V  G  + DA  +LSEKR G + V ++G+   GI++E DI R   +   D+
Sbjct: 9   MKASGEIFTVAPGASVADAAKLLSEKRIGAIVVSEDGKVPLGILSERDIVRELGRRGADV 68

Query: 281 NTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             L + ++M          ED L  V +  + Q     L VVD+    +G++   D
Sbjct: 69  LGLPITELMTHKLATCTTGEDAL--VILDRMTQGRFRHLPVVDEAGAMVGLISIGD 122


>gi|327311997|ref|YP_004338894.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326948476|gb|AEA13582.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 276

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 51/98 (52%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +AI++  +  FG + VVDE  +L GI TE D  +   +      + DVM +   V+ + +
Sbjct: 100 EAISLFLKHNFGSMPVVDEDGRLVGIFTEWDAMKIVAQAGFPHQIRDVMTRIVYVLTKYS 159

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A++ +  +      +VD+  K I ++H  D+LR+
Sbjct: 160 TVMDALEGITVYRFRRYPIVDEKGKVISMLHAKDVLRY 197


>gi|319401018|gb|EFV89237.1| CBS domain pair family protein [Staphylococcus epidermidis FRI909]
          Length = 432

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 239 LIDAITILSEKRFGC------VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           L D++TI   K+           +V+E  KL GI+T  +I     KDL    +  VM KN
Sbjct: 203 LFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTSREIINMNEKDL----LGKVMTKN 258

Query: 293 P-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  V L +T+ + A  LL    I +L V D+ +KA+G+++  D+L+
Sbjct: 259 PLSVKLTNTVASCA-HLLIWEGIELLPVTDNNKKAVGVINRQDVLK 303


>gi|303248672|ref|ZP_07334926.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
           JJ]
 gi|302489928|gb|EFL49854.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
           JJ]
          Length = 819

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 55/100 (55%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           +A+  ++ +   C+ V  E  +  GIITE D+ R    +  L  L++ D+M   P V +E
Sbjct: 155 EAVRRMASRSISCLVVARE-DRPAGIITERDVVRLLADNPRLGRLTLYDIM-SCPVVCVE 212

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D  +  A  L+++  +  L+VVDD ++ +G+V   D++R
Sbjct: 213 ADQPVFEAAMLMKKRRMRRLVVVDDDRRVLGLVTQSDIVR 252



 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKVILE 298
           A+ ++ ++   C+   ++G  + GI+TE DI +   H+  D     V DVM      +  
Sbjct: 26  ALAVMRDRGISCLVATEDGAPV-GIVTERDILWAAAHRGLDFPERPVGDVMTAPVITVPA 84

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DT+L  A  L+ Q ++  L++VD   KA G++   DL+
Sbjct: 85  DTMLVEAYHLMAQKHLRHLVMVDAAGKAGGVLTQSDLV 122


>gi|270291549|ref|ZP_06197770.1| transcription regulator [Pediococcus acidilactici 7_4]
 gi|270280046|gb|EFA25883.1| transcription regulator [Pediococcus acidilactici 7_4]
          Length = 280

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 12/134 (8%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTP---SFFVH--AAEASHGDLGMITRDDLIIVLSWS 121
           V   GIG S  +   L       G P   +  VH  AAE S G         +++++S S
Sbjct: 133 VYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAEMSKGR-------GVVVLISNS 185

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + E   +L  AR   +P++AIT    S +A  + +VL      E      A TTS + 
Sbjct: 186 GETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRSAATTSLMA 245

Query: 182 QLAIGDALAIALLE 195
           QL + D L  + L+
Sbjct: 246 QLYVVDLLYYSFLK 259


>gi|256810616|ref|YP_003127985.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793816|gb|ACV24485.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 194

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSV--EDVMIKNPKV 295
           + D   I++E   G V +V E  K  GI+TE DI  R   K+L    V  E+VM K    
Sbjct: 26  IYDIANIMTENNIGAVVIV-ENNKPVGILTERDIVKRVVSKNLKPKDVLAEEVMSKKIVT 84

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I ++  LT A +++  H I  L VV D +  +GI+   D+++
Sbjct: 85  IPQNASLTEAAKIMATHGIKRLPVVKDGE-LVGIITQSDIVK 125


>gi|289523668|ref|ZP_06440522.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503360|gb|EFD24524.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 378

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 7/94 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVI 296
           L  A+ I+       + VVDE  KL GI+T GDI  +F   K L+ +  +DV+   P   
Sbjct: 276 LAQAVEIMKSHAVNSILVVDESDKLLGIVTAGDIREHFGGKKYLDEIYTKDVISVRP--- 332

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +  L+  ++L+ + NI  + V DD    +G++
Sbjct: 333 --NESLSYIIKLMAEKNIGFVPVTDDNGILVGLI 364



 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 32/50 (64%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + ++ EDVMIKNP        L  A+++++ H ++ ++VVD+  K +GIV
Sbjct: 255 DLMTAEDVMIKNPVKAHPRRTLAQAVEIMKSHAVNSILVVDESDKLLGIV 304


>gi|242243881|ref|ZP_04798324.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|242232655|gb|EES34967.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|319400688|gb|EFV88913.1| helix-turn-helix domain, rpiR family protein [Staphylococcus
           epidermidis FRI909]
          Length = 290

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E
Sbjct: 132 IFIYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP+  I+S + + VA  ++IVLT  +  E+    +  TTS   Q+   
Sbjct: 192 MQSIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYGQTDEN-EMRMGATTSLFAQMFTI 250

Query: 187 DAL 189
           D L
Sbjct: 251 DIL 253


>gi|319950727|ref|ZP_08024623.1| inosine 5'-monophosphate dehydrogenase [Dietzia cinnamea P4]
 gi|319435605|gb|EFV90829.1| inosine 5'-monophosphate dehydrogenase [Dietzia cinnamea P4]
          Length = 511

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + V DE  +L GIIT  D+   F  D  +  V++VM + P V+  E      A+ L
Sbjct: 131 RISGLPVTDERGELVGIITNRDM--RFEMD-KSRRVDEVMTRAPLVVAREGVTAEAALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   +  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGDGRLTGLITVKDFVK 216


>gi|319792614|ref|YP_004154254.1| cbs domain containing membrane protein [Variovorax paradoxus EPS]
 gi|315595077|gb|ADU36143.1| CBS domain containing membrane protein [Variovorax paradoxus EPS]
          Length = 376

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 4/65 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +LGTL     D+M S + I  V+ G PL +A  ++ EKR   + V D  +++ GI+T+ D
Sbjct: 224 RLGTL--DCGDIM-SPNPIS-VEFGTPLQEAWALMHEKRIKALPVTDRTRRVVGIVTQAD 279

Query: 272 IFRNF 276
            FR  
Sbjct: 280 FFRQL 284


>gi|282907528|ref|ZP_06315370.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|283959640|ref|ZP_06377081.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|282328433|gb|EFB58704.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|283789232|gb|EFC28059.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
          Length = 292

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 48/180 (26%), Positives = 76/180 (42%), Gaps = 20/180 (11%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R  +++       +  Q     + +K  +  + + G G S  
Sbjct: 88  LIENESVETLKNKMIA--RATNTMRFVATNIMDAQIDAICDVLKNART-IFLFGFGASSL 144

Query: 78  IGSKLASTLASTGTPSFFVHAAE------ASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
               L   L+  G     +H         A+H D       D +I ++  GS  EL++I 
Sbjct: 145 TIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDD------RDCMIFVTNQGSHSELQSIA 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPK--EPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L   +  E E C   +A TTS   QL   D L
Sbjct: 199 QVATHYSIPIITISSTANNPVAQIADYALIYGRTDENEMC---MAATTSLFAQLFTVDIL 255


>gi|227828949|ref|YP_002830729.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831687|ref|YP_002833467.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580644|ref|YP_002839044.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229586156|ref|YP_002844658.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238621141|ref|YP_002915967.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284999243|ref|YP_003421011.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227458135|gb|ACP36822.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227460745|gb|ACP39431.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228011360|gb|ACP47122.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228021206|gb|ACP56613.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238382211|gb|ACR43299.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284447139|gb|ADB88641.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323476058|gb|ADX86664.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478781|gb|ADX84019.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 142

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NFHKDLNTLSV 285
           +VK+G   I+A  I+ +   G V +VDE     GI TE D+ R      N + ++  L  
Sbjct: 15  VVKVGTKAIEACKIMYQNNIGSVVIVDEKGYPVGIFTERDVLRAVACGKNLNDNIENLGT 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +I     +  ++ +    + + ++NI  L+VVD+  K +G+V   D++
Sbjct: 75  FGKLI----TVKPNSPIGEIAEKMVKNNIRHLVVVDEEGKLVGVVSIKDIV 121


>gi|1794166|dbj|BAA11216.1| unnamed protein product [Vibrio parahaemolyticus]
          Length = 565

 Score = 41.2 bits (95), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 57/100 (57%), Gaps = 6/100 (6%)

Query: 245 ILSEKRFGCV-AVVDEGQKLKGIITEGDIF-RNFHKDLNTLS-VEDVMIKNPKVILEDTL 301
           I+S+K  GC  A+V     L G++TE D+  R   +  N    VED+M  +P+ + +D  
Sbjct: 126 IMSKK--GCTCALVTNDNALVGMVTETDMTSRVVAEAFNIYRPVEDIMNAHPQSVDQDEP 183

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFGI 340
           +  A+ L+ +HNI  + V+D  ++ +G++   +L+ R GI
Sbjct: 184 VISALNLMMKHNIRNIPVLDKNKQVLGLISPQELVQRHGI 223


>gi|313114725|ref|ZP_07800227.1| SIS domain protein [Faecalibacterium cf. prausnitzii KLE1255]
 gi|310622950|gb|EFQ06403.1| SIS domain protein [Faecalibacterium cf. prausnitzii KLE1255]
          Length = 323

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 2/105 (1%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           ++  DL +++S+SG + ++  I    +R   P++A+TS  ++ + C+AD  LTL  + ES
Sbjct: 201 LSERDLAMIISYSGETAQMLEIARQCKRSGTPILALTSFGENSLTCYADCKLTLSTK-ES 259

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
               L    S +    + D L       +N+ +N  Y L    +L
Sbjct: 260 IYQNLGDYASHLSMTLLLDILYSEYFR-QNYQKNYTYKLERAREL 303


>gi|228473712|ref|ZP_04058460.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228274859|gb|EEK13676.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 492

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA   + E   G + +VDE   LKGI+T  D+   F +D NT  +  VM  +N     E 
Sbjct: 112 DAKHCMKEHSIGGIPIVDEQGILKGIVTNRDL--RFERD-NTRPITQVMTYENLITAPEG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A ++L  + I  L VV+   K +G++ F D+
Sbjct: 169 ISMKDAEKILENNKIEKLPVVNKDNKLVGLITFRDI 204


>gi|261402653|ref|YP_003246877.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
 gi|261369646|gb|ACX72395.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
          Length = 137

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 6/95 (6%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQ 307
           +   + VV+E  ++ GIIT  DI  N  KD  TL   V DVM KN   I E   L  A++
Sbjct: 38  KISSLPVVNEKNEVVGIITTTDIGYNLIKDRYTLETKVGDVMTKNVITIKESANLLEAIK 97

Query: 308 LL----RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    ++  I+ L VVD+  K +GI+   D++R 
Sbjct: 98  KMNLEDKKEIINQLPVVDENNKLVGIISDGDIIRI 132


>gi|332654329|ref|ZP_08420073.1| inosine-5'-monophosphate dehydrogenase [Ruminococcaceae bacterium
           D16]
 gi|332517415|gb|EGJ47020.1| inosine-5'-monophosphate dehydrogenase [Ruminococcaceae bacterium
           D16]
          Length = 491

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  L +A  ++++ R   V + D G KL GIIT  D+   F  D++ L +++VM K   V
Sbjct: 109 GHTLAEADELMAKYRISGVPICDNG-KLIGIITNRDM--KFETDMSQL-IDNVMTKENLV 164

Query: 296 IL-EDTLLTVAMQLLRQHNISVLMVVD 321
              E T L  A ++LR+H I  L +VD
Sbjct: 165 TAPEGTTLAEAKEILRKHKIEKLPIVD 191


>gi|291568084|dbj|BAI90356.1| PleD-like protein [Arthrospira platensis NIES-39]
          Length = 1384

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILS-----EKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSV 285
           V++ C + D I+I       E R  CV V+ +   + GI+T+ DI       ++L  L +
Sbjct: 36  VRLQCQMTDNISISESEPDLEARSTCVIVL-QDLMVVGILTQRDIVGLAAQQQNLGQLLI 94

Query: 286 EDVMIKNPKVI-LEDTLLTVAM---QLLRQHNISVLMVVDDCQKAIGIV---------HF 332
           E+VM   P VI L ++ LT ++    LL++H I  L +VDD  + +G+V           
Sbjct: 95  EEVM--TPSVITLRESELTDSLTIINLLQKHRIRHLPIVDDSDRLVGLVTHQSLRKLMRP 152

Query: 333 LDLLRFGII 341
           +DLLR  ++
Sbjct: 153 IDLLRLRLV 161


>gi|229096761|ref|ZP_04227731.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-29]
 gi|229115741|ref|ZP_04245144.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228667726|gb|EEL23165.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228686603|gb|EEL40511.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-29]
          Length = 284

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 43  SSLQGELSFQFHCAVEK-IKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           + LQ  L      A+EK ++A++   R+   G G SG I          TG       A 
Sbjct: 109 TGLQDTLHLLNDTALEKAVRALQEANRIEFYGNGGSGIIAMDAYHKFMRTGISCI---AH 165

Query: 100 EASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             SH  +   G++T++ +II +S SGS+  L   L  A+     +IAITS  KS ++  A
Sbjct: 166 TDSHFQIMGAGLLTKEAVIIAISHSGSNKGLLEALEVAKARGACIIAITSYQKSALSQLA 225

Query: 157 DIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           DI L T  +E E        ++S + QL++ D L + L
Sbjct: 226 DITLYTSTRETEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|157363330|ref|YP_001470097.1| inosine-5'-monophosphate dehydrogenase [Thermotoga lettingae TMO]
 gi|157313934|gb|ABV33033.1| inosine-5'-monophosphate dehydrogenase [Thermotoga lettingae TMO]
          Length = 485

 Score = 41.2 bits (95), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ ++S  + G + VVDE  KL G+IT  DI   F K+ +   V ++M    ++I+ D 
Sbjct: 106 DALMLMSTYKIGGLPVVDEEGKLMGLITNRDI--RFEKNYSR-KVRELMTPRTQLIVADP 162

Query: 301 LLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++  A  +L  H +  L +VD      G++   D++
Sbjct: 163 SISLDEAKGILHTHKVEKLPLVDSDNHLAGLITIKDIM 200


>gi|320450872|ref|YP_004202968.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
 gi|320151041|gb|ADW22419.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
          Length = 210

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 14/113 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV----------- 285
            P+++AI +L  K F  + VV +G KL G++T+ D+         TLSV           
Sbjct: 18  TPVLEAINLLKNKGFRRLPVVKDG-KLVGLVTDKDLKDAMPSKATTLSVWEMNYLLSRLT 76

Query: 286 -EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++VM K    +  D  L  A  L+ +  I  L V+ D +K +GI+   D+LR
Sbjct: 77  VQEVMAKPVITVEADAPLEKAALLMEEKKIGGLPVM-DGEKLVGIITVTDVLR 128


>gi|310820605|ref|YP_003952963.1| cystathionine beta-synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309393677|gb|ADO71136.1| Cystathionine beta-synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 138

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNP-K 294
           L DA   + ++ FG + V    QK+ G++T+ DI F+   +  D     V D++ + P +
Sbjct: 16  LTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIVFQAIAERLDPQQTPVSDILSEGPPR 74

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ED  L  A +L+ +H +  L V+D  Q  +G+V   D+ R
Sbjct: 75  YAFEDDELATAARLMTEHGLPRLPVLDRHQNLVGMVSLKDVSR 117


>gi|289191641|ref|YP_003457582.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus sp.
           FS406-22]
 gi|288938091|gb|ADC68846.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus sp.
           FS406-22]
          Length = 495

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI ++       + VVD   KL GIIT  D+     K   T  V+DVM K+     ED 
Sbjct: 111 DAINVMETYSISGLPVVDNEDKLVGIITHRDVKAVEDK---TKKVKDVMTKDVVCAKEDV 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               A++L+  + +  L +VDD  K IGI+   D+L+
Sbjct: 168 EEEEALELMYANRVERLPIVDDENKLIGIITLRDILK 204


>gi|256545929|ref|ZP_05473284.1| phosphosugar-binding transcriptional regulator [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398351|gb|EEU11973.1| phosphosugar-binding transcriptional regulator [Anaerococcus
           vaginalis ATCC 51170]
          Length = 279

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 22/107 (20%), Positives = 49/107 (45%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ ++G+  SG I       L   G   ++   A  +   +  I ++DL+I +++   + 
Sbjct: 130 KIYLSGVAGSGLICEDFYYKLLRAGADVYYEKDAHTNLSRISHIGKNDLLIAITYGAKTK 189

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           E+     YA+     LI+I+    S +A  +D+ + +P   +   +G
Sbjct: 190 EVLESFNYAKIKGASLISISKNENSKLAKDSDVFIKIPSSEKEIRYG 236


>gi|189218198|ref|YP_001938840.1| glucosamine 6-phosphate synthetase [Methylacidiphilum infernorum
           V4]
 gi|189185056|gb|ACD82241.1| Glucosamine 6-phosphate synthetase [Methylacidiphilum infernorum
           V4]
          Length = 617

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 35/104 (33%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL-SWSGS 123
           GR    G+   G +  K  S   + G PS     AE  HG + +I +    I L    G 
Sbjct: 480 GRQFQYGVALEGALKIKEISYCCAEGNPS-----AELKHGIIALIDKTTPSICLCPRDGV 534

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            D+  + +   +    PLIAI +EN   VA  AD VL +PK PE
Sbjct: 535 YDKNISNMEEIKARGGPLIAIATENDEQVARIADDVLYIPKAPE 578


>gi|315656165|ref|ZP_07909056.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315493167|gb|EFU82767.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 212

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 14/113 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTL 283
           G  + DAI ++       + V+ +G KL G++++ D+ R    D            L+ L
Sbjct: 17  GATVPDAIELMQTHGITKLPVLRDG-KLCGVVSQLDLNRALPSDATSLSFGEVAYLLSKL 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +M KNP  I+ D +L  A  L+R   + +L V+D+  K +G++   D+L
Sbjct: 76  KIYKIMRKNPPTIVPDAMLEEAAILMRDTKVEILPVLDEG-KVVGVITESDVL 127


>gi|257077255|ref|ZP_05571616.1| CBS domain-containing protein [Ferroplasma acidarmanus fer1]
          Length = 273

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D I +L +     + V D     +G+IT  DIF N  +    L    VM K P V   D+
Sbjct: 16  DVIQVLIKNNITGIPVKDNQNHYQGVITRRDIFYNPDETQTAL----VMRKAPTVNENDS 71

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLLR 337
           + T A QL  Q     L+VV+D  +  GI+   +FL++++
Sbjct: 72  INTAARQLYTQKK-RHLVVVNDKNEVTGILTPQNFLNIIK 110


>gi|219850238|ref|YP_002464671.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aggregans DSM
           9485]
 gi|219544497|gb|ACL26235.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aggregans DSM
           9485]
          Length = 493

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA+ +++E +   V V      L GIIT  D+   F  D  T  + ++M  +N   + E 
Sbjct: 113 DALDLMAEYKISGVPVTTADGDLIGIITNRDL--RFETD-RTRPIRELMTSRNLVTVPEG 169

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L +H I  ++VVD+  K  G++   D+++
Sbjct: 170 TTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMK 207


>gi|49482800|ref|YP_040024.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424688|ref|ZP_05601115.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429991|ref|ZP_05606375.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432693|ref|ZP_05609053.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435595|ref|ZP_05611643.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903161|ref|ZP_06311052.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282904950|ref|ZP_06312808.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907904|ref|ZP_06315738.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910214|ref|ZP_06318018.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913406|ref|ZP_06321195.1| SIS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282918359|ref|ZP_06326096.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923324|ref|ZP_06331004.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957372|ref|ZP_06374825.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500454|ref|ZP_06666305.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509397|ref|ZP_06668108.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293523985|ref|ZP_06670672.1| SIS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|295427112|ref|ZP_06819748.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590537|ref|ZP_06949176.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49240929|emb|CAG39596.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272258|gb|EEV04381.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279188|gb|EEV09789.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282108|gb|EEV12243.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284786|gb|EEV14905.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314192|gb|EFB44582.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317493|gb|EFB47865.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322438|gb|EFB52760.1| SIS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282325606|gb|EFB55914.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328149|gb|EFB58428.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331775|gb|EFB61286.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596116|gb|EFC01077.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C160]
 gi|283790823|gb|EFC29638.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920948|gb|EFD98009.1| SIS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|291095459|gb|EFE25720.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467494|gb|EFF10009.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128900|gb|EFG58530.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576836|gb|EFH95551.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312439008|gb|ADQ78079.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315193939|gb|EFU24333.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 182

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG + +  A  L   G  +  V  +         I  +D+ +++S SGS++ 
Sbjct: 39  IFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTP-----AIKSNDVFVIISGSGSTEH 93

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L+ +   A+     ++ IT+   S +   A   + LP   +   HG A    ++ + A  
Sbjct: 94  LRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEHGSAQPLGSLFEQASQ 153

Query: 187 ---DALAIALLESRNFSENDFYVLH 208
              D++ + L+   N SE      H
Sbjct: 154 LFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|134046258|ref|YP_001097743.1| CBS domain-containing protein [Methanococcus maripaludis C5]
 gi|132663883|gb|ABO35529.1| CBS domain containing protein [Methanococcus maripaludis C5]
          Length = 137

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 7/106 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI 296
           +ID+   L + +  C+ VV+E  ++ GI+T  DI  N   D  TL  ++ DVM K    I
Sbjct: 26  VIDSFEALLKNKISCLPVVNENNEIIGIVTTTDIGYNLIIDKYTLETTIADVMTKTVVTI 85

Query: 297 LEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLR 337
            ED     A++ +  H      I+ L VV+   K +GI+   D++R
Sbjct: 86  GEDESAADALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDIIR 131


>gi|196250717|ref|ZP_03149405.1| CBS domain containing protein [Geobacillus sp. G11MC16]
 gi|196209796|gb|EDY04567.1| CBS domain containing protein [Geobacillus sp. G11MC16]
          Length = 148

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 15/103 (14%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKN----- 292
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI     +  KD   + V DVM        
Sbjct: 28  EAAQIMSQKNIGALPVVESGQ-VKGMITDRDITLRVTSQGKDPAAVKVSDVMTNQVVTGT 86

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P + ++D     A  ++ QH +  L +V++ Q   GIV   D+
Sbjct: 87  PNMSVQD-----AANVMAQHQVRRLPIVENNQLQ-GIVALGDI 123


>gi|209885943|ref|YP_002289800.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
 gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
          Length = 242

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 25/123 (20%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------------- 282
           L +A  ++ +     + VVD+  KL G+I+EGD  R       T                
Sbjct: 20  LREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEIGTQTKRARWLAFFIGPGRAA 79

Query: 283 --------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     V  VM   P  I EDT L   ++L+ +HNI  L VV D Q  +G+V   D
Sbjct: 80  TEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIKRLPVVKDMQ-LLGMVTRTD 138

Query: 335 LLR 337
           LLR
Sbjct: 139 LLR 141



 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 20/50 (40%), Positives = 30/50 (60%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M +NP  + EDT L  A  L+ Q++IS L VVD   K +G++   D +R
Sbjct: 6   IMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVR 55


>gi|326793953|ref|YP_004311773.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
 gi|326544717|gb|ADZ89937.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
          Length = 133

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 61/116 (52%), Gaps = 13/116 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------NFHKDLNT 282
           V++   L +  T+L  + F  + VV++G KL GII++ DI R             +DL+T
Sbjct: 14  VEMDARLPEVKTLLQNRGFHHLPVVEQG-KLVGIISDRDILRLVSPFVGKVNEQTRDLDT 72

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +   VM + P  +  +  ++  +  + + +IS + V+DD +  IGIV + DL+
Sbjct: 73  LNRAAHQVMTRQPITVKANAEVSDVVNWMLKVSISCVPVIDDDEAVIGIVTWRDLI 128


>gi|219668606|ref|YP_002459041.1| signal transduction protein with CBS domains [Desulfitobacterium
           hafniense DCB-2]
 gi|219538866|gb|ACL20605.1| putative signal transduction protein with CBS domains
           [Desulfitobacterium hafniense DCB-2]
          Length = 124

 Score = 41.2 bits (95), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKV 295
           P+ + + I++EK+   + VV+E   L G++ + DIFR   +   + +  V+ VM K+   
Sbjct: 19  PIENVLKIMTEKKVNGLPVVNEHNLLIGMVVKADIFRFMIQPGHIESCPVDWVMAKDVVS 78

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D  +  A   L  ++I  + VV++  K +G+V   DLLR+
Sbjct: 79  VHPDESVREAADKLLSNHIVAMPVVENS-KVVGVVSVEDLLRY 120


>gi|332157823|ref|YP_004423102.1| hypothetical protein PNA2_0180 [Pyrococcus sp. NA2]
 gi|331033286|gb|AEC51098.1| hypothetical protein PNA2_0180 [Pyrococcus sp. NA2]
          Length = 172

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 23/134 (17%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLS 284
           S+P+++   P+++A+ IL  +    +    E  KL G+I   DI           L T+S
Sbjct: 24  SLPVLEEEAPIVNALRILRTRHHVWIVNNKEEMKLVGVIRYFDILDILMPPKRARLGTIS 83

Query: 285 ------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---- 328
                       V DVM +N   I E+  +  A++ ++++ I +L +VD+  +  G    
Sbjct: 84  PLFKSIFTGAEKVGDVMERNVLTIDENATVLEALEKMKRYEIPILALVDEGNRLKGEVSV 143

Query: 329 ---IVHFLDLLRFG 339
              I  FL LLR G
Sbjct: 144 RLLITEFLRLLRMG 157


>gi|258404842|ref|YP_003197584.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
 gi|257797069|gb|ACV68006.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
          Length = 227

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           L++A   L +     + VVD   +L GI+T+ DI                +  L+ +S++
Sbjct: 20  LMEASKTLKDYAIRRLPVVDSHGRLLGIVTDRDIKEASPSRATTLDIHELYYLLSAISLQ 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D+M  +P  +     +  A  L+R+H I  L VVDD    +GI+   D+
Sbjct: 80  DIMTPSPVTVRARDTVGRAAILMRRHTIEGLPVVDDDNTVVGIITESDI 128


>gi|219851795|ref|YP_002466227.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
 gi|219546054|gb|ACL16504.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
          Length = 496

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
            P ++ G         L  K    + V+    +L GI+T  DI     K  N L ++++M
Sbjct: 384 FPTIEEGATTAVTARRLVNKEVNHLPVLSRSDRLVGIVTSWDIANAVAK--NFLWLDEIM 441

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            KN      D  +  A + + +H+IS L VVD  Q  IG++
Sbjct: 442 SKNVITTAPDEPIESAAKKMEEHSISALPVVDADQHLIGLI 482


>gi|184200324|ref|YP_001854531.1| inosine-5'-monophosphate dehydrogenase [Kocuria rhizophila DC2201]
 gi|183580554|dbj|BAG29025.1| inosine-5'-monophosphate dehydrogenase [Kocuria rhizophila DC2201]
          Length = 507

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 40/83 (48%), Gaps = 1/83 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNI 314
           VVDE Q+L GIIT  D       D +T  V DVM   P V  +  +    A  LL QH I
Sbjct: 133 VVDEDQRLLGIITNRDTRYLPESDFDTRLVRDVMTPMPLVTGKVGMGKDEAHALLAQHKI 192

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VD+  +  G++   D  +
Sbjct: 193 EKLPLVDEQDRLTGLITVKDFTK 215


>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
          Length = 144

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 27/132 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    PL +A+ ++SE     + VVDE   L G +TE D+                    
Sbjct: 8   VSTTTPLQEAVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYVMLLDAVI 67

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                 N+ K+++ +   +V ++M K+P     DT L  A + L   +   L V+D   K
Sbjct: 68  YLRNPLNWDKEVHQVLGSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLFVLDAANK 127

Query: 326 AIGIVHFLDLLR 337
            +G++   D++R
Sbjct: 128 PVGVLTRGDVVR 139


>gi|124265510|ref|YP_001019514.1| CBS domain-containing protein [Methylibium petroleiphilum PM1]
 gi|124258285|gb|ABM93279.1| CBS domain protein [Methylibium petroleiphilum PM1]
          Length = 374

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            EG+ +R   +        D+M +    +   T L  A  LLR+H I  L VVD  ++ +
Sbjct: 218 AEGEAYR---RRFGATLCADIMTREVVTVSFGTELQDAWALLREHRIKALPVVDRARRVV 274

Query: 328 GIVHFLDLLR 337
           GIV   D LR
Sbjct: 275 GIVTLADFLR 284


>gi|291298616|ref|YP_003509894.1| inosine-5'-monophosphate dehydrogenase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567836|gb|ADD40801.1| inosine-5'-monophosphate dehydrogenase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 495

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 20/196 (10%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP E +  P  +  +T     + +   L  A +++   +     +   GG LG +
Sbjct: 14  DDVLLLPGESDVVPSDVDTSTKLTRNITLRMPLLSAAMDTVTEARMAIAMARQGG-LGVI 72

Query: 217 FVCASDVMHSGDSIPLVK----------IGCP----LIDAITILSEKRFGCVAVVDEGQK 262
               S   H    + LVK          + C     L +   + +  R   V VVDE  K
Sbjct: 73  HRNLS-AEHQAQQVDLVKRSESGMVADPVTCAPYQTLAEVDALCARYRISGVPVVDESGK 131

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNISVLMVVD 321
           L GI+T  D+   F  D+ T+ V DVM     +  +  + T  A+ LL+++ +  L +VD
Sbjct: 132 LVGIVTNRDM--RFETDM-TVRVSDVMTTESLITAKVGVSTEAALDLLKRNKVEKLPIVD 188

Query: 322 DCQKAIGIVHFLDLLR 337
           D  +  G++   D  +
Sbjct: 189 DDGQLRGLITVKDFTK 204


>gi|15677250|ref|NP_274403.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis MC58]
 gi|161870263|ref|YP_001599433.1| transcriptional regulator [Neisseria meningitidis 053442]
 gi|218768404|ref|YP_002342916.1| putative transcriptional regulator [Neisseria meningitidis Z2491]
 gi|254805183|ref|YP_003083404.1| putative RpiR-family transcriptional regulator [Neisseria
           meningitidis alpha14]
 gi|296315284|ref|ZP_06865225.1| transcriptional regulator HexR [Neisseria polysaccharea ATCC 43768]
 gi|304387281|ref|ZP_07369474.1| transcriptional regulator HexR [Neisseria meningitidis ATCC 13091]
 gi|7226627|gb|AAF41753.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis MC58]
 gi|121052412|emb|CAM08746.1| putative transcriptional regulator [Neisseria meningitidis Z2491]
 gi|161595816|gb|ABX73476.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           meningitidis 053442]
 gi|254668725|emb|CBA06535.1| putative RpiR-family transcriptional regulator [Neisseria
           meningitidis alpha14]
 gi|254669843|emb|CBA04248.1| putative regulatory protein [Neisseria meningitidis alpha153]
 gi|261392339|emb|CAX49872.1| HTH-type transcriptional repressor HexR (hex regulon repressor)
           [Neisseria meningitidis 8013]
 gi|296837780|gb|EFH21718.1| transcriptional regulator HexR [Neisseria polysaccharea ATCC 43768]
 gi|304338664|gb|EFM04781.1| transcriptional regulator HexR [Neisseria meningitidis ATCC 13091]
 gi|308389506|gb|ADO31826.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis alpha710]
 gi|316984210|gb|EFV63188.1| helix-turn-helix domain, rpiR family protein [Neisseria
           meningitidis H44/76]
 gi|319410651|emb|CBY91023.1| HTH-type transcriptional repressor HexR (hex regulon repressor)
           [Neisseria meningitidis WUE 2594]
 gi|325128423|gb|EGC51304.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           N1568]
 gi|325130458|gb|EGC53218.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           OX99.30304]
 gi|325132418|gb|EGC55111.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M6190]
 gi|325134376|gb|EGC57021.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M13399]
 gi|325136785|gb|EGC59384.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M0579]
 gi|325138408|gb|EGC60976.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           ES14902]
 gi|325140393|gb|EGC62914.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           CU385]
 gi|325142579|gb|EGC64974.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           961-5945]
 gi|325144677|gb|EGC66975.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240013]
 gi|325198532|gb|ADY93988.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           G2136]
 gi|325199992|gb|ADY95447.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           H44/76]
 gi|325201902|gb|ADY97356.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240149]
 gi|325204381|gb|ADY99834.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240355]
 gi|325205845|gb|ADZ01298.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M04-240196]
 gi|325208346|gb|ADZ03798.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           NZ-05/33]
          Length = 282

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  S++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAASLLGERRFLK--ESELENAIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++  D+++ +S +GSS EL   +  A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLSDQDVLVAISNTGSSIELLDAVSIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|225181526|ref|ZP_03734968.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167774|gb|EEG76583.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 506

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++   R   V +  EG KL GIIT  D+   F  + + L ++DVM K+  V+    
Sbjct: 131 DAAALMERYRISGVPITVEG-KLVGIITNRDL--RFETNYDRL-IKDVMTKDRLVVAPVG 186

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A ++L+QH +  L +VDD     G++   D+
Sbjct: 187 TTLQQAQEILQQHKVEKLPIVDDDFMLKGLITIKDI 222


>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
 gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
          Length = 147

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILE 298
           +A +++ +   G + VVD+   L G++T+ DI  R   K  ++   VE+VM  +P  +  
Sbjct: 22  EAASLMVDNDCGEIPVVDDSGALVGVVTDRDIACRCVAKGKSSDQRVEEVMTSSPVTVTA 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +      +  + +  L VVDD  K  GIV   D+ R
Sbjct: 82  DASVDECCTKMEDNQVRRLPVVDDKGKCCGIVAQADIAR 120


>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 157

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 38/132 (28%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFH--------------------- 277
           DA  +L E R     VVDE  KL GII+EGDI R    H                     
Sbjct: 23  DAARVLRENRISGAPVVDEDGKLVGIISEGDIMRLIEVHSPSLNLIMPSPLDLLELPLRM 82

Query: 278 -----------KDLNTLSVEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQ 324
                      +    + VE++M   PKV+      +V  A +L+ +H+I  L V+D+  
Sbjct: 83  KHEYDEIARGIRKAAVMRVEEIM--TPKVVTVPPHASVSDAAELMERHDIKRLPVIDENG 140

Query: 325 KAIGIVHFLDLL 336
           +  GI+   D++
Sbjct: 141 RLAGIITRGDII 152


>gi|269925620|ref|YP_003322243.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789280|gb|ACZ41421.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 490

 Score = 41.2 bits (95), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 2/99 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ I+ +     V VVDE  KL GI+T  DI   F  DL       +  +N      
Sbjct: 108 LSDAVAIMEKYHISGVPVVDEEGKLVGILTNRDI--RFETDLTKPISSAMTSENLITAPV 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A ++L ++ I  L VVDD  +  G++   D+ +
Sbjct: 166 GTTLEEAREILHRYKIEKLPVVDDEGRLKGLITVKDIQK 204


>gi|288560309|ref|YP_003423795.1| transcriptional regulator [Methanobrevibacter ruminantium M1]
 gi|288543019|gb|ADC46903.1| transcriptional regulator [Methanobrevibacter ruminantium M1]
          Length = 308

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  + DA  +LS  +     V+ EG  + G+++  DI     +      V D+M K 
Sbjct: 184 LKPGDSIKDAAYLLSHNQIDGAPVITEGVAI-GMVSLIDIVNALAEGKENEDVRDIMSKR 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I +DTL+  A+  + +  IS L+VVDD    IG+V   DL+ 
Sbjct: 243 LFFINKDTLIANAVYKMYKFGISRLIVVDDEHAPIGVVTRTDLIE 287


>gi|330835690|ref|YP_004410418.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567829|gb|AEB95934.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 128

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV-ILEDTLLT 303
           +++ K  G + V + G+ + GIITE D+ R    D +      V++ +  + + ED+ +T
Sbjct: 28  MMTMKNVGSIIVTESGKPI-GIITERDVVRAIGNDKSLDEKAGVIMTSSLITVREDSPIT 86

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+ L+R +NI  L VV+   K  GI+   D+ R
Sbjct: 87  GALSLMRTYNIRHLPVVNQEGKLTGIISIRDIAR 120


>gi|227551451|ref|ZP_03981500.1| RpiR family transcriptional regulator [Enterococcus faecium TX1330]
 gi|257895938|ref|ZP_05675591.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com12]
 gi|293377392|ref|ZP_06623594.1| transcriptional regulator, RpiR family [Enterococcus faecium PC4.1]
 gi|227179460|gb|EEI60432.1| RpiR family transcriptional regulator [Enterococcus faecium TX1330]
 gi|257832503|gb|EEV58924.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com12]
 gi|292643910|gb|EFF62018.1| transcriptional regulator, RpiR family [Enterococcus faecium PC4.1]
          Length = 291

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 14/178 (7%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAS 88
           IA+K    S++S  + +L  + H  +E I  +     R+ +   G S     K  + +  
Sbjct: 99  IAKKMADLSIQSIKKAQLQIE-HQDLENISKVLNNAQRIFLFAKGDSQITARKFQNKMVK 157

Query: 89  TGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                F + A E S    +   +T +D  + +S+SG     + I+ Y +    P + IT 
Sbjct: 158 LN--KFLILAEEYSDSSWNAANLTSEDYAVFISYSGRIHHYERIMTYLKHVGAPTLLITG 215

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRNFSEN 202
              S +A  AD+ L + +E     +  A   +   Q+A    L    +++ S+NF EN
Sbjct: 216 NQHSEMAKQADMCLVISQE----EYDFAKVATFSSQIAFDYVLNTLFSVIYSQNFEEN 269


>gi|153005297|ref|YP_001379622.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028870|gb|ABS26638.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 166

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           VV +G +L G++T+ D+ R+     +   TL+V +VM ++   +   T L+ A +L+ + 
Sbjct: 58  VVKDG-RLVGLVTQRDVLRSGQSGRSGARTLAVSEVMTRDLTTVRPATALSQAARLMLER 116

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
               L V D+  + +GIV   D +RF
Sbjct: 117 KYGCLPVCDEEGRLVGIVTEADFVRF 142



 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 7/81 (8%)

Query: 206 VLHPG--GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           VL  G  G+ G   +  S+VM     +  V+    L  A  ++ E+++GC+ V DE  +L
Sbjct: 73  VLRSGQSGRSGARTLAVSEVMTR--DLTTVRPATALSQAARLMLERKYGCLPVCDEEGRL 130

Query: 264 KGIITEGDIFR---NFHKDLN 281
            GI+TE D  R   +  +DL+
Sbjct: 131 VGIVTEADFVRFAADVVRDLD 151


>gi|115379651|ref|ZP_01466733.1| CBS [Stigmatella aurantiaca DW4/3-1]
 gi|115363335|gb|EAU62488.1| CBS [Stigmatella aurantiaca DW4/3-1]
          Length = 142

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNP-K 294
           L DA   + ++ FG + V    QK+ G++T+ DI F+   +  D     V D++ + P +
Sbjct: 20  LTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIVFQAIAERLDPQQTPVSDILSEGPPR 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ED  L  A +L+ +H +  L V+D  Q  +G+V   D+ R
Sbjct: 79  YAFEDDELATAARLMTEHGLPRLPVLDRHQNLVGMVSLKDVSR 121


>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
           [Fulvimarina pelagi HTCC2506]
 gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
           [Fulvimarina pelagi HTCC2506]
          Length = 176

 Score = 41.2 bits (95), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 3/101 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVIL 297
           +A+  +S++  G V VV   +K++G++TE D+ +   N  KD  T  + D+M +  ++  
Sbjct: 26  EAVAEMSKRDIGSVVVVGPDEKVEGLVTERDVMKRLVNQGKDPKTTQLADIMTRELRMAR 85

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D  L   ++++       L V+D   + + I+   D + +
Sbjct: 86  ADDDLLDWLRIMSNERFRRLPVIDADNRIVAIMTQGDFVSY 126


>gi|254240247|ref|ZP_04933569.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126193625|gb|EAZ57688.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 385

 Score = 40.8 bits (94), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L + R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQDHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|299536081|ref|ZP_07049398.1| N-acetylmuramic acid 6-phosphate etherase 2 [Lysinibacillus
           fusiformis ZC1]
 gi|298728505|gb|EFI69063.1| N-acetylmuramic acid 6-phosphate etherase 2 [Lysinibacillus
           fusiformis ZC1]
          Length = 301

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/126 (25%), Positives = 56/126 (44%), Gaps = 24/126 (19%)

Query: 65  GRVVITGIGKSGHIG--------------SKLASTLASTGTPSFFVHAAEASHGDLGM-- 108
           GR+   G G SG IG               KL   + + G  +  + A E +  +L +  
Sbjct: 64  GRLFYVGAGTSGRIGLLDAVECPPTFSTSPKLVQAILAGGADAVMI-AIEGAEDNLSLGE 122

Query: 109 -------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
                  +T  D++I ++ SG +  +K  L YA++     I++ S   S+++ HADI + 
Sbjct: 123 VELQKHQLTDQDVVIGIAASGRTPFVKGALNYAQQLGAKTISLVSNAHSIISKHADIAIE 182

Query: 162 LPKEPE 167
           +   PE
Sbjct: 183 VITGPE 188


>gi|298714699|emb|CBJ27624.1| myosin 29 [Ectocarpus siliculosus]
          Length = 3170

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 5/89 (5%)

Query: 253  CVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLL 309
             V VVD G  L GI TE D+  R   K +N   +SVEDVM  NP  +     +  A+Q +
Sbjct: 1709 AVLVVDNG-GLAGIFTEKDMLNRVLSKGINPDEVSVEDVMTPNPDTVSSTMTVLEALQEM 1767

Query: 310  RQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
             ++    L VVD D    +G+V  +++++
Sbjct: 1768 HENKYLHLPVVDEDSGNVLGVVSVMEIIQ 1796


>gi|296157951|ref|ZP_06840784.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
 gi|295891719|gb|EFG71504.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
          Length = 164

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVIL 297
           DAI +++ +R G + V  EG ++ GI+TE D  R      +      V D+M    + + 
Sbjct: 27  DAIAVMAHRRVGALIVAHEG-RIAGIVTERDYARKIVLMDRSSRHTPVRDIMSTAVRYVS 85

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            D      M L+ ++ I  L V+   Q  IG+V   DL++  I+
Sbjct: 86  PDQTTEECMALMTEYRIRYLPVITAGQ-VIGMVSIGDLVQNLIV 128


>gi|260584393|ref|ZP_05852140.1| transcriptional regulator, RpiR family [Granulicatella elegans ATCC
           700633]
 gi|260157911|gb|EEW92980.1| transcriptional regulator, RpiR family [Granulicatella elegans ATCC
           700633]
          Length = 268

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 70/158 (44%), Gaps = 8/158 (5%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V++I + + R+ + G+G SG + + L   L+  G    +   +      L   T  D II
Sbjct: 110 VQQIHSAR-RIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFII 168

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S+S ++ E+      A+  SIP ++IT      +   +   L +P+   +     +  
Sbjct: 169 GISYSSNTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIRS--SAI 226

Query: 177 TSAIMQLAIGDALAIALL---ESRNFS--ENDFYVLHP 209
           TS      + D L +ALL   E R+F   E  + + HP
Sbjct: 227 TSRNDSFFLIDILYLALLQKEEHRHFQNLEKSYRMTHP 264


>gi|300861615|ref|ZP_07107699.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis TUSoD
           Ef11]
 gi|295112310|emb|CBL30947.1| inosine-5'-monophosphate dehydrogenase [Enterococcus sp. 7L76]
 gi|300849076|gb|EFK76829.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis TUSoD
           Ef11]
 gi|315143577|gb|EFT87593.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2141]
          Length = 493

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           ++DA  ++S  R   V +V+  E +KL GIIT  D+   F  D   + +E+VM K+  V 
Sbjct: 110 VVDAEELMSRYRISGVPIVETMENRKLVGIITNRDM--RFVTDYQ-IKIEEVMTKDHLVT 166

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 167 APVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDI 206


>gi|116748379|ref|YP_845066.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697443|gb|ABK16631.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 225

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 13/112 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------------HKDLNTLSV 285
           +++   +L++  F  + VVDE  +L GI+T+ DI                  + L  + +
Sbjct: 20  ILETRELLAKSSFRHLPVVDEENRLVGIVTDRDIRSAMPSVFLDENETLKERERLAQMKI 79

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D+M KNP  +     L  A+ L+++  +    VVD   K  G++   DL+R
Sbjct: 80  KDIMTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDREGKLRGMLSIRDLVR 131


>gi|229583497|ref|YP_002841896.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228014213|gb|ACP49974.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
          Length = 142

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 10/111 (9%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NFHKDLNTLSV 285
           +VK+G   I+A  I+ +   G V +VDE     GI TE D+ R      N + ++  L  
Sbjct: 15  VVKVGTKAIEACKIMYQNNIGSVVIVDEKGYPVGIFTERDVLRAVACGKNLNDNVENLGT 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +I     +  ++ +    + + ++NI  L+VVD+  K +G+V   D++
Sbjct: 75  FGKLI----TVKPNSPIGEIAEKMVKNNIRHLVVVDEEGKLVGVVSIKDIV 121


>gi|325295690|ref|YP_004282204.1| inosine-5'-monophosphate dehydrogenase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066138|gb|ADY74145.1| inosine-5'-monophosphate dehydrogenase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 488

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVIL 297
           + DA  ++ + +   + V DE  KL GIIT  DI   F KD  T  +++VM K N K + 
Sbjct: 107 IADAEGLMRKYKISGLPVTDENGKLLGIITNRDI--RFVKDY-TKKIKEVMTKENLKTVP 163

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L ++ I  L VVD+     G++   D+
Sbjct: 164 VGTTLEEAKEILHKYKIEKLPVVDENGYLKGLITIKDI 201


>gi|126179145|ref|YP_001047110.1| signal-transduction protein [Methanoculleus marisnigri JR1]
 gi|125861939|gb|ABN57128.1| putative signal-transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 280

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D + IL       V V+ +G+ L GIIT  D+ R   +    L    +M  +P VI  D 
Sbjct: 16  DVLRILKRTGISGVPVLKDGE-LVGIITRKDLLRKAEETQLGL----LMTPDPVVIRPDA 70

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ A QL+ +HNI  L V+ D  K +G++   DL+
Sbjct: 71  PISEAAQLMVRHNIRRLPVLQDG-KMVGLISVADLI 105


>gi|86750304|ref|YP_486800.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           HaA2]
 gi|86573332|gb|ABD07889.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           HaA2]
          Length = 498

 Score = 40.8 bits (94), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV   Q     KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LADALALMTQYGFSGIPVVTGAQGDGPGKLVGILTNRDV--RFATDPAQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL QH I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|327310241|ref|YP_004337138.1| glutamine amidotransferase class-II [Thermoproteus uzoniensis
           768-20]
 gi|326946720|gb|AEA11826.1| glutamine amidotransferase class-II [Thermoproteus uzoniensis
           768-20]
          Length = 588

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 48/101 (47%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V + G G S H G   +   A  GTP   + AAE  H  L  +    +I+ +S SG + +
Sbjct: 284 VYVIGNGTSLHAGMVSSYYFADVGTPVDVISAAEFPHYALENVGTGTVILAISQSGETSD 343

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +   +  ARR    +I +T+   S +A  +++ L +   PE
Sbjct: 344 VIRSIRAARRQGAVIIGVTNSVSSRLAIESNVYLPITAGPE 384


>gi|158421811|ref|YP_001523103.1| putative transcriptional regulator [Azorhizobium caulinodans ORS
           571]
 gi|158328700|dbj|BAF86185.1| putative transcriptional regulator [Azorhizobium caulinodans ORS
           571]
          Length = 296

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 4/139 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ +E     E       AVE ++  +G + + GIG S  +    A  L   G  ++ ++
Sbjct: 119 LAGIEKITAPENRVAMAAAVELLRGAQG-IGLFGIGASAILADYAARLLIRNGRHAYALN 177

Query: 98  AAEASHGD-LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                 G+ L  + R D++I++  S +  E  A L  ARR  + +I +T          A
Sbjct: 178 RTGIGLGEQLLAMRRGDVLIMMGQSSAHREGTAALEEARRLGVRMILLTGAAAPAFGKQA 237

Query: 157 DIVLTLPK-EPESCP-HGL 173
           D+++ +P+   E  P HGL
Sbjct: 238 DVIIRVPRGRSELVPLHGL 256


>gi|134100026|ref|YP_001105687.1| CBS domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291002982|ref|ZP_06560955.1| CBS domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912649|emb|CAM02762.1| CBS domain protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 140

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 6/121 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
           A D+MH+G     V  G  L  A  ++ +   G + +     +L G+IT+ DI       
Sbjct: 4   ARDIMHAG--AKCVNEGESLQRAAQMMRDLNVGSLPICGNDDRLHGMITDRDIVVKCCAE 61

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            KDL+ +   ++    P  +  D  L   + L+ QH I  L V+ D  + +G++   DL 
Sbjct: 62  GKDLSQVKAGELAQGTPHWVDADADLKQVLNLMEQHQIRRLPVIAD-HRLVGMISEADLA 120

Query: 337 R 337
           R
Sbjct: 121 R 121


>gi|152971417|ref|YP_001336526.1| putative DNA-binding transcriptional regulator [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576973|ref|YP_002237096.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|238896012|ref|YP_002920748.1| putative DNA-binding transcriptional regulator [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262040297|ref|ZP_06013548.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934058|ref|YP_003438117.1| RpiR family transcriptional regulator [Klebsiella variicola At-22]
 gi|290508254|ref|ZP_06547625.1| DNA-binding transcriptional regulator [Klebsiella sp. 1_1_55]
 gi|330007692|ref|ZP_08306031.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
 gi|150956266|gb|ABR78296.1| putative transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566031|gb|ACI07807.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|238548330|dbj|BAH64681.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042406|gb|EEW43426.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288888787|gb|ADC57105.1| transcriptional regulator, RpiR family [Klebsiella variicola At-22]
 gi|289777648|gb|EFD85645.1| DNA-binding transcriptional regulator [Klebsiella sp. 1_1_55]
 gi|328535373|gb|EGF61855.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 52/118 (44%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV++TGIG SG +    +  L   G  +       A    +  ++ DDL++ +S+SG   
Sbjct: 134 RVIVTGIGASGLVARNFSWKLMKIGINAVSEQDMHALLATVQAMSSDDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           E+      A R    ++AIT  + + +   A   L    E ++       +TSA M L
Sbjct: 194 EINMAAGEALRVGCKILAITGFSPNALQQQATHCLYTIAEEQATRSAAISSTSAQMML 251


>gi|91204120|emb|CAJ71773.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 172

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           +  V VVDE  ++ G+++E D+ +     K L  ++ E++M K P  + ED+ +   + L
Sbjct: 72  YSGVPVVDEKGRVIGVVSEFDLLKVIQAGKKLEQVTAEEIMTKTPVCVKEDSSIEEIIDL 131

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +HNI  + VV +    +GI+   D+L
Sbjct: 132 MTKHNIIRVPVVRN-DMLVGIISRCDIL 158


>gi|291483389|dbj|BAI84464.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 140

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 14/102 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNP 293
           +A +++ +   G + VV++G  LKG++T+ DI        R+    ++ +   +++  NP
Sbjct: 23  EAASLMKQHNVGAIPVVEQG-VLKGMLTDRDITLRTTAQGRDGQTPVSEVMSTELVSGNP 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + LED     A QL+ QH I  L +VD     +GIV   DL
Sbjct: 82  NMSLED-----ASQLMAQHQIRRLPIVDQ-NNLVGIVALGDL 117


>gi|293394835|ref|ZP_06639125.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291422586|gb|EFE95825.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 76/158 (48%), Gaps = 5/158 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           ++L ++L      + H A+  ++A + RV++ GIG SG +    +  L   G  +     
Sbjct: 108 AALRATLDINSEERLHQALSMLRAAR-RVILMGIGASGLVAKDFSFKLLKLGVMAVAESD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                  +  + + DL++ +S+SG   E+      AR     ++A+T  + + +   AD 
Sbjct: 167 MHVQLAAVQALDKQDLLVAISFSGERREINLAAEEARIAGAQVLALTCFSPNGLQQRADH 226

Query: 159 VL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            L T+ +EP +    ++ +T+   Q A+ D L +AL++
Sbjct: 227 CLYTIAEEPNTRSAAISSSTA---QYALTDLLFMALIQ 261


>gi|258423977|ref|ZP_05686860.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9635]
 gi|257845831|gb|EEV69862.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9635]
          Length = 182

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG + +  A  L   G  +  V  +         I  +D+ +++S SGS++ 
Sbjct: 39  IFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTP-----AIKSNDVFVIISGSGSTEH 93

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L+ +   A+     ++ IT+   S +   A   + LP   +   HG A    ++ + A  
Sbjct: 94  LRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEHGSAQPLGSLYEQASQ 153

Query: 187 ---DALAIALLESRNFSENDFYVLH 208
              D++ + L+   N SE      H
Sbjct: 154 LFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|300866823|ref|ZP_07111501.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
 gi|300335173|emb|CBN56661.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
          Length = 1117

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 37/118 (31%), Positives = 59/118 (50%), Gaps = 18/118 (15%)

Query: 230 IPLVKIGCPLID-----AITILSEKRFGCVAVVDEGQK-------LKGIITEGDIFRNFH 277
           IP V +  P  +     A  I+ E R GCV V+++ ++       LKGI TE D+ +   
Sbjct: 50  IPCVPLNPPTTEVSQSLAAPIIGESRAGCVFVIEDSRQEISKPSILKGIFTERDLVQLIA 109

Query: 278 --KDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             + L   +V +VM   P V L   +D  +  A+ LLRQH I  L +++   + +G+V
Sbjct: 110 SGQKLRGTTVAEVM-SMPVVTLTECKDQDVFTALILLRQHQIRHLPILNTKGQLVGVV 166


>gi|222147556|ref|YP_002548513.1| transcriptional regulator protein [Agrobacterium vitis S4]
 gi|221734544|gb|ACM35507.1| transcriptional regulator protein [Agrobacterium vitis S4]
          Length = 298

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 3/117 (2%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD--LGMITRDDLIIVLSWSGSSDELK 128
           GIG SG I S  A   + +G PS+ ++    S  +  LG+ T   L+++L       E  
Sbjct: 153 GIGASGIIASYGARLFSRSGFPSYALNTTGISLAEQLLGLGTGHVLVMLLHGR-PHREAM 211

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            ++  A+R  +PLI +  + +SV+  HA + L +P+         AP+   I  LA+
Sbjct: 212 TVISEAKRLDVPLILVLGQAESVLRQHASVSLVVPRAKSEQVALHAPSLVVIETLAL 268


>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
 gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
          Length = 215

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           +A+ ++ + +   + V+ + +K+ GI+TE D+                H  L+ L +E++
Sbjct: 22  EALKLMKQNKIKRLIVMKD-EKIVGIVTEKDLLYASPSKATTLNIWELHYLLSKLKIEEI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+   + E+T +  A +++ + +IS L VVDD    +GI+   D+ +
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGHLVGIITQTDIFK 129



 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+ D +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVMKD-EKIVGIVTEKDLL 53


>gi|157147064|ref|YP_001454383.1| hypothetical protein CKO_02841 [Citrobacter koseri ATCC BAA-895]
 gi|157084269|gb|ABV13947.1| hypothetical protein CKO_02841 [Citrobacter koseri ATCC BAA-895]
          Length = 297

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A  L+  G PS   +    +  + L  + R D++I+++     
Sbjct: 145 QVGIFGIGASGILADYTARLLSRIGLPSVAFNRTGINLAEQLIALQRGDVLIMMAQKSPH 204

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
            E    +  A+R  +P+I +T+  +S  +  AD+V+ +P+  E+
Sbjct: 205 REGLTTIREAKRLGVPVILLTNALESRFSKEADVVINVPRGGEN 248


>gi|18313291|ref|NP_559958.1| hypothetical protein PAE2364 [Pyrobaculum aerophilum str. IM2]
 gi|18160814|gb|AAL64140.1| conserved protein with 4 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 10/107 (9%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSVEDVMIK 291
            P+ + I++     FG + +VDE  +L GI TE D+ +     +F   +  +    + + 
Sbjct: 98  TPVAEVISLFLRHNFGSMPIVDEAGRLVGIFTEWDVLKLASQLDFPHRVRDVMTRIIYVL 157

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P   + D L  + +   R++ I     VD+  K + ++H  D+L++
Sbjct: 158 TPYSTVMDVLEGITIYKFRRYPI-----VDENGKVVAMLHAKDVLKY 199


>gi|89894205|ref|YP_517692.1| hypothetical protein DSY1459 [Desulfitobacterium hafniense Y51]
 gi|89333653|dbj|BAE83248.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 128

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 57/103 (55%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKV 295
           P+ + + I++EK+   + VV+E   L G++ + DIFR   +   + +  V+ VM K+   
Sbjct: 19  PIENVLKIMTEKKVNGLPVVNEQHLLIGMVVKADIFRFMIQPGHIESCPVDWVMAKDVVS 78

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D  +  A   L  ++I+ + VV++  K +G+V   DLL++
Sbjct: 79  VHPDESVQEAAGKLLSNHIAAMPVVENG-KVVGVVSVEDLLKY 120


>gi|99082587|ref|YP_614741.1| RpiR family transcriptional regulator [Ruegeria sp. TM1040]
 gi|99038867|gb|ABF65479.1| transcriptional regulator, RpiR family [Ruegeria sp. TM1040]
          Length = 300

 Score = 40.8 bits (94), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 72/145 (49%), Gaps = 14/145 (9%)

Query: 65  GRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G++V+ G+G  S  +  + A+ +   G P+  +  +         + + D+++++S SG+
Sbjct: 141 GQIVVAGVGGGSTMVAQEAANRMFRLGIPAVSISDSYLLQMRAATLVKGDVLLLVSASGA 200

Query: 124 SDELKAILYYARRFSIPLIAITSE-----NKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           +DE+ +    A  +   ++AI         ++ VA  AD    LP++P+     L PT S
Sbjct: 201 ADEIVSAAAIAGGYGATVVAIARPGSRLAQEATVAIEAD----LPEDPDI----LKPTAS 252

Query: 179 AIMQLAIGDALAIALLESRNFSEND 203
               L I DALA+++ ++R  +  +
Sbjct: 253 RYAHLVIVDALAMSVAQARTAATTE 277


>gi|291532203|emb|CBL05316.1| Transcriptional regulators [Megamonas hypermegale ART12/1]
          Length = 234

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 6/103 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG---DLGMITRDDLIIVLSWSG 122
           R+   G+G SG +    A      G   F     + SH     + ++  +D+++V+S SG
Sbjct: 132 RIFFIGLGNSGFVADDSAYKFMRIG---FNARGIDNSHLIMLHMALLHENDVVVVISHSG 188

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
            S E+   +  A+R    LI ITS   +++  +AD  + + +E
Sbjct: 189 ESFEIIKAVELAKRNGTKLIVITSNRDTILKEYADACIFMKQE 231


>gi|289192708|ref|YP_003458649.1| CBS domain containing membrane protein [Methanocaldococcus sp.
           FS406-22]
 gi|288939158|gb|ADC69913.1| CBS domain containing membrane protein [Methanocaldococcus sp.
           FS406-22]
          Length = 138

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQ 307
           +   + VVD+  K+ GI+T  DI  N  +D  TL  ++ DVM KN   I ED  +  A++
Sbjct: 38  KISSLPVVDDENKVIGIVTTTDIGYNLIRDRYTLETTIGDVMTKNVITIREDDNILEAIK 97

Query: 308 LL-----RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     ++  I+ L VVD   K +GI+   D++R
Sbjct: 98  KMDINGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132


>gi|206901202|ref|YP_002250627.1| anti-sigma regulatory factor [Dictyoglomus thermophilum H-6-12]
 gi|206740305|gb|ACI19363.1| anti-sigma regulatory factor [Dictyoglomus thermophilum H-6-12]
          Length = 290

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 2/93 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLT 303
           I+  KR   + +VD+ ++L G++T  ++ +   K DLN +  E  M++ PK +  D  L 
Sbjct: 36  IMRIKRIDAIPIVDDLERLIGLVTVENVIQALVKGDLN-VPCERYMVREPKCLKPDDNLY 94

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A+   RQ       VVD+  K +GI+   D++
Sbjct: 95  EALLKFRQFRFGRFPVVDEEGKVLGILSTKDIV 127


>gi|16077988|ref|NP_388804.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308762|ref|ZP_03590609.1| hypothetical protein Bsubs1_05098 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313084|ref|ZP_03594889.1| hypothetical protein BsubsN3_05039 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318010|ref|ZP_03599304.1| hypothetical protein BsubsJ_04983 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322284|ref|ZP_03603578.1| hypothetical protein BsubsS_05084 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314647|ref|YP_004206934.1| putative oxidoreductase [Bacillus subtilis BSn5]
 gi|1724016|sp|P54606|YHCV_BACSU RecName: Full=CBS domain-containing protein yhcV
 gi|1239998|emb|CAA65706.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|2633246|emb|CAB12751.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320020921|gb|ADV95907.1| putative oxidoreductase [Bacillus subtilis BSn5]
          Length = 140

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 14/102 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNP 293
           +A +++ +   G + VV++G  LKG++T+ DI        R+    ++ +   +++  NP
Sbjct: 23  EAASLMKQHNVGAIPVVEQG-VLKGMLTDRDIALRTTAQGRDGQTPVSEVMSTELVSGNP 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + LED     A QL+ QH I  L +VD     +GIV   DL
Sbjct: 82  NMSLED-----ASQLMAQHQIRRLPIVDQ-NNLVGIVALGDL 117


>gi|330507964|ref|YP_004384392.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928772|gb|AEB68574.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 305

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D + ++ EK  G + +VDE  ++KGIITE D  R+       L VE  M  N       T
Sbjct: 125 DVLKLMYEKNVGGLPIVDEDSRIKGIITEEDFVRSCRGVDTGLVVESFMSPNVVTAPAQT 184

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    +++ Q     + VV D    +G+V   D++++
Sbjct: 185 TIEKMTRMIIQKGFRRMPVVQDGV-LMGMVTASDIMKY 221


>gi|318606789|emb|CBY28287.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia enterocolitica
           subsp. palearctica Y11]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 24/132 (18%)

Query: 61  KAIK--GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD 105
           KA++  GR++  G G SG +G   AS    T             G P   + A E +  D
Sbjct: 57  KALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDD 116

Query: 106 LGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           + +  RD         D+++ L+ SG +  +   L +AR+   P  AI+    S +A  A
Sbjct: 117 VSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEA 176

Query: 157 DIVLTLPKEPES 168
            + ++    PE+
Sbjct: 177 LVAISPVVGPEA 188


>gi|311278506|ref|YP_003940737.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308747701|gb|ADO47453.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 6/121 (4%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI---TRDDLIIVLSWSG 122
           R++ITGIG SG +    +  L   G   F   A +  H  L  +    +DDL++ +S+SG
Sbjct: 134 RIIITGIGASGLVARNFSWKLMKIG---FNAVAEQDMHALLATVQAMAQDDLLLAISYSG 190

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
              E+      A R    ++AIT  + + +   A   L    E ++       +TSA M 
Sbjct: 191 ERREINLAADEALRVGGKILAITGFSPNALQQRASHCLYTIAEEQATRSAAISSTSAQMM 250

Query: 183 L 183
           L
Sbjct: 251 L 251


>gi|237653288|ref|YP_002889602.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T]
 gi|237624535|gb|ACR01225.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T]
          Length = 487

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           + I +  + RF  V VV EG K+ GI+T  D    F   L+ L V ++M    +++   E
Sbjct: 107 EVIALQRQNRFSGVPVV-EGGKVVGIVTNRDT--RFETKLDQL-VSEIMTPQDRLVTVRE 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L  A +LLR H +  ++V++D  +  G++   D+++
Sbjct: 163 GASLEEARELLRVHRLERVLVLNDAGELCGLITVKDMMK 201


>gi|167746137|ref|ZP_02418264.1| hypothetical protein ANACAC_00833 [Anaerostipes caccae DSM 14662]
 gi|167654652|gb|EDR98781.1| hypothetical protein ANACAC_00833 [Anaerostipes caccae DSM 14662]
          Length = 286

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + L +L S+L  ++  Q  CA+  +KA    ++ TG   +  I   L+  L+  G  SF 
Sbjct: 103 QNLRNLSSNLSKDVLLQ--CALILLKAPAVHIIATG--NTTPIALDLSFRLSRFGVQSFS 158

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
              +E    ++ + +++D++I +S SG+S ++      A+   + +I+ITS++ S +A  
Sbjct: 159 SSISEYYLNNVSLGSKEDVVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSDSPLARV 218

Query: 156 ADIVLTLPKE 165
           +D +L+  +E
Sbjct: 219 SDHILSSSEE 228


>gi|94971756|ref|YP_593804.1| CBS domain-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDV 288
            V I   + DAIT++ ++  G VAVV+E   + G+ +E D+ R F    +   +  V + 
Sbjct: 13  FVSINASVADAITMMIDRHAGAVAVVEENHVVAGMFSERDVMRKFALSGRSAESTPVREY 72

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +   +   +T    A+Q++ +     L +VD   K +G++    +L
Sbjct: 73  MSQYVVMGSPETTPAEALQVMIESRHRHLPIVDSDGKLLGVISIRHVL 120


>gi|91773709|ref|YP_566401.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712724|gb|ABE52651.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 315

 Score = 40.8 bits (94), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 57/117 (48%), Gaps = 18/117 (15%)

Query: 239 LIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED--------VM 289
           +IDAI I++EK+F  + + + G  K++GIIT  DI      D + L +E+         +
Sbjct: 60  IIDAIKIMTEKKFRHIPITNAGTNKIEGIITSFDIIDFLGGDKSQL-IENKYKGNLLAAI 118

Query: 290 IKNPKVILEDTLLTV--------AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   I++  ++++        A +L+ +HNI  L VVD      GI    D L F
Sbjct: 119 NANISSIMQPHVVSIHSTGNIKEAFELMLKHNIGSLPVVDSTDHVCGICTEKDFLTF 175


>gi|91202354|emb|CAJ75414.1| conserved hypothetical sugar phosphate isomerase protein
           [Candidatus Kuenenia stuttgartiensis]
          Length = 200

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 5/97 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + +TG G+SG +    A  L   G  ++ V  A   + D G     DL+I  S SG++  
Sbjct: 54  IFVTGQGRSGLVSRTFAMRLTHIGLNAYCVGDATTPNIDKG-----DLLIACSSSGNTHI 108

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
              I   A++    + AITS+  S +  +ADI++ LP
Sbjct: 109 TCYIAELAKKSFATVAAITSQKNSPLTEYADIIVDLP 145


>gi|13620170|emb|CAC36391.1| hypothetical protein [Capsella rubella]
          Length = 780

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE 286
           V  G  L +A  IL +    C+ VVDE   L GI+T GDI R          D NT  V 
Sbjct: 627 VSPGMTLREARNILKDSHQNCLMVVDEDDFLAGILTHGDIRRYLSNNVSTILDENTCQVS 686

Query: 287 DVMIKN------PKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGI 329
            V  KN       + +L    D  + VA +L+    +  L VV   +        K +G+
Sbjct: 687 SVCTKNIIYRGQERGLLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGL 746

Query: 330 VHFLDLLRF 338
           +H+  +  F
Sbjct: 747 LHYDSIWTF 755


>gi|307256728|ref|ZP_07538507.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864776|gb|EFM96680.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 290

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +Q +L ++IAE   L          L FQ     VE+++  + R+ + G+G SG      
Sbjct: 106 LQSSLNNVIAETINL----------LDFQELEYVVEELQKAQ-RIFLFGVGSSGLTAEDA 154

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
              L   G  +  V      +    ++   D++I +S SG SDE+ + L  AR+     I
Sbjct: 155 KHKLMRIGLQTDAVTNNHFMYMQASLLREGDVVIGISHSGYSDEVISALKIARKNHAKTI 214

Query: 143 AITSENKSVVACHADIVL 160
           AIT   +S +   AD VL
Sbjct: 215 AITHHIRSPITNVADYVL 232


>gi|163790844|ref|ZP_02185269.1| opuCA [Carnobacterium sp. AT7]
 gi|159873912|gb|EDP67991.1| opuCA [Carnobacterium sp. AT7]
          Length = 393

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  L +AI I+ +KR   + V D+   LKG +    I RN  +     SV D+MI     
Sbjct: 265 GKSLSEAIRIMRDKRVDSLFVTDDAGVLKGYVDIERIDRNRKR---ATSVGDIMIDKVYF 321

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + E TLL   +Q + +     + VVD+  + IG+V
Sbjct: 322 VREGTLLRDTVQRILKRGFKNIPVVDNKDRLIGLV 356


>gi|331270377|ref|YP_004396869.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           BKT015925]
 gi|329126927|gb|AEB76872.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           BKT015925]
          Length = 484

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++++ R   V + +EG KL GIIT  DI    N+ + +  +   + +I  P    E
Sbjct: 108 DALDLMAKYRISGVPITEEG-KLVGIITNRDIAFETNYEQAIKNIMTSENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A ++L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTVEEAKEILKGHKIEKLPLVDKDNNLKGLITIKDIEK 201


>gi|325959691|ref|YP_004291157.1| hypothetical protein Metbo_1965 [Methanobacterium sp. AL-21]
 gi|325331123|gb|ADZ10185.1| protein of unknown function DUF39 [Methanobacterium sp. AL-21]
          Length = 514

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D    L +     + VVD+ QKL GI+T  DI     K    L  +DVM K   +  ED 
Sbjct: 409 DVAKRLVQNNINHLPVVDDDQKLLGIVTSWDIANAVAKGKTKL--KDVMTKKVVIAREDE 466

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +  + + +H IS L ++D      G++   D+ R 
Sbjct: 467 PVDIIARRIDKHEISGLPIIDKNNHVKGMITAEDISRL 504


>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
           JL354]
          Length = 143

 Score = 40.8 bits (94), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPK 294
           P+ DA+T+L+EKR G + V+D G K+ GI +E D+         +     V +VM     
Sbjct: 23  PMRDAVTLLAEKRIGALPVMD-GGKVAGIFSERDVIYCMAAQGPSCLERPVGEVMTSPAI 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  D  +  A+ L+ +  I  L VV+D    +G V   DL++
Sbjct: 82  TVTRDQKIDQALALMTKRRIRHLPVVED-DALLGFVSIGDLVK 123


>gi|300865330|ref|ZP_07110141.1| Sensor protein [Oscillatoria sp. PCC 6506]
 gi|300336633|emb|CBN55291.1| Sensor protein [Oscillatoria sp. PCC 6506]
          Length = 778

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 5/89 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLT 303
           + E R  CV V+ EG +L G+ TE DI R       LN++ + +VM ++   + +     
Sbjct: 64  IGEARASCVLVM-EGLQLLGVFTERDIVRLTANGISLNSVRIAEVMTRSVITLKQSDSQD 122

Query: 304 V--AMQLLRQHNISVLMVVDDCQKAIGIV 330
           +  A+ +LRQH I  L +VDD    +GIV
Sbjct: 123 IFTALSILRQHRIRHLPIVDDRGLLMGIV 151


>gi|332162683|ref|YP_004299260.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|325666913|gb|ADZ43557.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 24/132 (18%)

Query: 61  KAIK--GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD 105
           KA++  GR++  G G SG +G   AS    T             G P   + A E +  D
Sbjct: 57  KALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDD 116

Query: 106 LGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           + +  RD         D+++ L+ SG +  +   L +AR+   P  AI+    S +A  A
Sbjct: 117 VSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEA 176

Query: 157 DIVLTLPKEPES 168
            + ++    PE+
Sbjct: 177 LVAISPVVGPEA 188


>gi|325958054|ref|YP_004289520.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325329486|gb|ADZ08548.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 316

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/148 (25%), Positives = 66/148 (44%), Gaps = 13/148 (8%)

Query: 202 NDFYVL---HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           N + +L   +PG  LG +     ++M     + ++     +  AI I+ +K  G + VVD
Sbjct: 90  NKYKILEEKYPGNFLGAINESVKEIMTR--DVEVITHKDSIDHAIDIMRKKEIGALPVVD 147

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
              K+ GI++E D        L    VED M KN       T +  A +++ ++ +  + 
Sbjct: 148 ADHKMVGIVSERDFVILLSGVLTDEVVEDYMTKNVIATTPGTRIEGASKIMVRNKLRRIP 207

Query: 319 VVDDCQKA--------IGIVHFLDLLRF 338
           VV + +K         +GIV   D+L F
Sbjct: 208 VVGEERKTSHPEKDKIMGIVTATDILEF 235


>gi|309389570|gb|ADO77450.1| transcriptional regulator, RpiR family [Halanaerobium praevalens
           DSM 2228]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            A+EK       + I GIG SG +   L   L       F+     A       +  +DL
Sbjct: 127 AAIEKA----ANIYIFGIGASGLVAKDLEYKLMRIKKQVFYYSDTHAQLSLAANLDSNDL 182

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            I +S+SG S E+   L  A+      IAI+   ++ ++  A+I L +    ++   G  
Sbjct: 183 AIAISYSGESLEVCEALKIAKTRGAETIAISKYGENPLSEIAEIKLQVAGSEKNLRLG-- 240

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDF 204
             TS I QL   D L +A      F++NDF
Sbjct: 241 AITSRIAQLVAIDILFVA------FAKNDF 264


>gi|224002098|ref|XP_002290721.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974143|gb|EED92473.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 369

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 15/113 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NFHKDLNTLSV-----EDVM 289
           DA  +L  KR   +AVVDE  KL G  +  DI            D + +S      +  +
Sbjct: 251 DAFELLDSKRLSGIAVVDEDGKLIGNTSARDIKNAVCDAGKTGMDTDIISYLAQVRQSQI 310

Query: 290 IKNPKV----ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +KN +     + ED  +   + LL +     + VVD+ +K +G+V F D+++F
Sbjct: 311 VKNDRYPTCHVHEDATVGHVVNLLAKTGYHRVFVVDEEKKPVGVVSFADIIKF 363


>gi|195952569|ref|YP_002120859.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932181|gb|ACG56881.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 489

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 10/102 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-----LSVEDVMIKNPKV 295
           +A  ++ + +   + VVD+  KL GI+T  D+    H+D +      ++ ++++     +
Sbjct: 109 EAKKLMDKYKISGLPVVDDDGKLIGILTNRDLRFVKHQDFSKPISMFMTSKNLITAKEGI 168

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LED     A ++LR H I  L +VDD  K  G++   D+++
Sbjct: 169 SLED-----ATEILRAHKIEKLPIVDDEGKVKGLITIKDIMK 205


>gi|53729201|ref|ZP_00134052.2| COG1737: Transcriptional regulators [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208186|ref|YP_001053411.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae L20]
 gi|165976123|ref|YP_001651716.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190150017|ref|YP_001968542.1| HTH-type transcriptional regulator [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251500|ref|ZP_07337676.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252374|ref|ZP_07338540.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245565|ref|ZP_07527651.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247684|ref|ZP_07529723.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307249916|ref|ZP_07531889.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252261|ref|ZP_07534158.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307254520|ref|ZP_07536355.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258975|ref|ZP_07540706.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261172|ref|ZP_07542847.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263350|ref|ZP_07544966.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126096978|gb|ABN73806.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876224|gb|ABY69272.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189915148|gb|ACE61400.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648833|gb|EFL79023.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302649732|gb|EFL79912.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306853267|gb|EFM85486.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855787|gb|EFM87951.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306858044|gb|EFM90127.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306860183|gb|EFM92199.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306862503|gb|EFM94462.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866999|gb|EFM98856.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868903|gb|EFN00705.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306871228|gb|EFN02956.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 290

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 62/138 (44%), Gaps = 12/138 (8%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +Q +L ++IAE   L          L FQ     VE+++  + R+ + G+G SG      
Sbjct: 106 LQSSLNNVIAETINL----------LDFQELEYVVEELQKAQ-RIFLFGVGSSGLTAEDA 154

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
              L   G  +  V      +    ++   D++I +S SG SDE+ + L  AR+     I
Sbjct: 155 KHKLMRIGLQTDAVTNNHFMYMQASLLREGDVVIGISHSGYSDEVISALKIARKNHAKTI 214

Query: 143 AITSENKSVVACHADIVL 160
           AIT   +S +   AD VL
Sbjct: 215 AITHHIRSPITNVADYVL 232


>gi|300245699|gb|ADJ93907.1| putative phenylphosphate synthetase stimulating protein [Clostridia
           bacterium enrichment culture clone BF]
          Length = 228

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           L+ A  IL E     + VV  G KL GI+T+ D+                +  L+ + V+
Sbjct: 20  LMRATRILKENSIRRLPVVSHG-KLIGIVTDRDVKDASPSKTTSLDIHELYYLLSEMKVK 78

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DVM  NP  + ED  L  A  ++ +  IS L VVD     +G++   D+LR
Sbjct: 79  DVMTSNPLTLSEDDTLEKAALVMLEDKISGLPVVDGLGHLVGLLSETDVLR 129


>gi|290968816|ref|ZP_06560353.1| transcriptional regulator, RpiR family [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781112|gb|EFD93703.1| transcriptional regulator, RpiR family [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 290

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 39/144 (27%), Positives = 70/144 (48%), Gaps = 12/144 (8%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSWS 121
           GRV + G G S  +   +A+     G    ++ A   +H  +    ++   D +I +S S
Sbjct: 134 GRVEVYGFGNSATVCRDIATRYMRLG---LWIQAYSDAHMQVTAAALLQPGDAVIAVSHS 190

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT-LPKEPESCPHGLAPTTSAI 180
           G+S EL   +  A++    +IAIT  ++S +A  AD+ L  + +E +      A   S +
Sbjct: 191 GASAELLHSVQTAKKNGAAVIAITGHSRSPLAALADVCLCGMGREVKYSSEAGA---SRL 247

Query: 181 MQLAIGDAL--AIALLESRNFSEN 202
           + +A+GD L   +A+  S  F +N
Sbjct: 248 IHMALGDLLYTRLAMTRSEIFQKN 271


>gi|157144503|ref|YP_001451822.1| putative DNA-binding transcriptional regulator [Citrobacter koseri
           ATCC BAA-895]
 gi|157081708|gb|ABV11386.1| hypothetical protein CKO_00221 [Citrobacter koseri ATCC BAA-895]
          Length = 282

 Score = 40.8 bits (94), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 37/131 (28%), Positives = 55/131 (41%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVVITGIG SG +    A  L   G      H   A    +  +  DDL++ +S+SG   
Sbjct: 134 RVVITGIGTSGLVAQNFAWKLMKIGFNVVAEHDMHALLATVQALAPDDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT    + +   A   L    E ++       +T A  Q  +
Sbjct: 194 ELNMAADETLRVGGKVLAITGFTPNALQQRATRCLYTIAEEQATRSAAISSTHA--QTML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|262039677|ref|ZP_06012966.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
 gi|261746294|gb|EEY33844.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
          Length = 290

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 44/162 (27%), Positives = 75/162 (46%), Gaps = 13/162 (8%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-----TP 92
           + +LE +L+  L+++ +    K+      + I G+G SG IG+  AS L   G      P
Sbjct: 114 IKALEETLKF-LNYEIYEEAIKLITNANTIDIYGVGNSGSIGNDFASKLLRIGLNCRAYP 172

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
              +    A H  LG   + DL I +S SG + +    L  A+      + +T+   S++
Sbjct: 173 DNHLQQLCACH--LG---KKDLAIAISHSGETKDTVDALRIAKESGAKTLVLTNFKASII 227

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
             +ADI L    + ES  +     +S + QLA+ D L + +L
Sbjct: 228 TKYADISL-FTGDTESTFYS-ETMSSRMSQLALVDMLYMGVL 267


>gi|145591771|ref|YP_001153773.1| CBS domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283539|gb|ABP51121.1| CBS domain containing protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 280

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 31/134 (23%), Positives = 61/134 (45%), Gaps = 10/134 (7%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG L +     + V     S+  V+   P+ + I++     FG + +VDE  +L GI TE
Sbjct: 71  GGSLYSDIYMKNVVEIGTRSVVSVRPHTPISEVISLFLRHNFGSMPIVDEEGRLVGIFTE 130

Query: 270 GDIFR-----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            D+ +     +F   +  +    + +  P   + D L  + +   R++ I     V++  
Sbjct: 131 WDVIKLASQLDFPHRVRDVMTRIIYVLTPYSTIMDVLEGITIYKFRRYPI-----VNEGG 185

Query: 325 KAIGIVHFLDLLRF 338
           K + ++H  D+LR+
Sbjct: 186 KVVAMLHAKDVLRY 199


>gi|123441374|ref|YP_001005361.1| N-acetylmuramic acid-6-phosphate etherase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088335|emb|CAL11126.1| putative glucokinase protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 295

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 24/132 (18%)

Query: 61  KAIK--GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD 105
           KA++  GR++  G G SG +G   AS    T             G P   + A E +  D
Sbjct: 57  KALRDGGRLIYLGAGTSGRLGVLDASECPPTFGVPHGRVIGLIAGGPGALLKAVEGAEDD 116

Query: 106 LGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           + +  RD         D+++ L+ SG +  +   L +AR+   P  AI+    S +A  A
Sbjct: 117 VSLGERDLRDLQLTATDMVVGLAASGRTPYVIGALRFARQLGCPTAAISCNPDSPIAQEA 176

Query: 157 DIVLTLPKEPES 168
            + ++    PE+
Sbjct: 177 LVAISPVVGPEA 188


>gi|206889623|ref|YP_002248326.1| CBS domain pair, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
 gi|206741561|gb|ACI20618.1| CBS domain pair, putative [Thermodesulfovibrio yellowstonii DSM
           11347]
          Length = 121

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 19/85 (22%), Positives = 51/85 (60%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           CV V++E +K+ G+ +EGD+ R   ++++  +    +I    + L++  ++ A +L++++
Sbjct: 29  CVVVLNENKKVVGVFSEGDVLRTILQNIDLHTPLKKVISPSFLYLKEKNMSKAYELIKKY 88

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I+++ V+DD      ++   D+++
Sbjct: 89  GITLIPVIDDSFNLKEVITIFDVMK 113


>gi|170702038|ref|ZP_02892955.1| CBS domain containing membrane protein [Burkholderia ambifaria
           IOP40-10]
 gi|170133048|gb|EDT01459.1| CBS domain containing membrane protein [Burkholderia ambifaria
           IOP40-10]
          Length = 391

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDNRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300


>gi|126732615|ref|ZP_01748412.1| CBS domain protein [Sagittula stellata E-37]
 gi|126706899|gb|EBA05968.1| CBS domain protein [Sagittula stellata E-37]
          Length = 144

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 29/47 (61%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           DS+  VK G  + DA  IL+EKR G V +  +G   +GI++E DI R
Sbjct: 13  DSVYTVKPGTKVADAAKILAEKRIGTVVISSDGVVAEGILSERDIVR 59


>gi|238753918|ref|ZP_04615278.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia ruckeri ATCC
           29473]
 gi|238707906|gb|EEQ00264.1| N-acetylmuramic acid 6-phosphate etherase [Yersinia ruckeri ATCC
           29473]
          Length = 280

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 56/135 (41%), Gaps = 23/135 (17%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEAS 102
           A E +KA  GR++  G G SG +G   AS    T             G P   + A E +
Sbjct: 40  AAEALKA-GGRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGA 98

Query: 103 HGDLGM---------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
              L +         +T  D+++ L+ SG +  +   L YAR    P  AI+    S +A
Sbjct: 99  EDSLTLGAEDLQALQLTSTDMVVGLAASGRTPYVIGALRYARERGCPTAAISCNPDSPIA 158

Query: 154 CHADIVLTLPKEPES 168
             A + ++    PE+
Sbjct: 159 REAQVAISPLVGPEA 173


>gi|84514689|ref|ZP_01002053.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Loktanella vestfoldensis SKA53]
 gi|84511740|gb|EAQ08193.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Loktanella vestfoldensis SKA53]
          Length = 611

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 17/149 (11%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT----ILSEKRF 251
           +R  + ND     P     TL     D + + D      + C   D IT    ++ + R 
Sbjct: 127 TRGRTRNDADATRPA----TLTETRVDQLMAAD-----PVTCSADDTITAIAKLMRQYRI 177

Query: 252 GCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLL 309
            C+ V+  G +L GI+T  DI  R   + L+T L V  +M  NP+ +    + +  + ++
Sbjct: 178 SCLPVM-AGTRLAGIVTLHDINNRVVAEGLDTGLPVSRIMTANPETLPPSAIGSDVLHMM 236

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     + +VD C + +GIV   +L RF
Sbjct: 237 MERRFGHVPIVDQC-RLVGIVTQTNLTRF 264


>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
 gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
 gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
 gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia AU 1054]
 gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia HI2424]
 gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
          Length = 153

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKSDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKIVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLVGLISIGDLVK 127


>gi|302519581|ref|ZP_07271923.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB78]
 gi|318058049|ref|ZP_07976772.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318081521|ref|ZP_07988837.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SA3_actF]
 gi|302428476|gb|EFL00292.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB78]
          Length = 500

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V VVD   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 113 LQEADAICAKFRISGVPVVDGAGKLLGIVTNRDMA--FETD-RSRKVREVMTPMPLVTGK 169

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM LLR+H I  L +VDD     G++   D ++
Sbjct: 170 VGISGVDAMGLLRRHKIEKLPLVDDAGVLKGLITVKDFVK 209


>gi|222082600|ref|YP_002541965.1| transcriptional regulator [Agrobacterium radiobacter K84]
 gi|221727279|gb|ACM30368.1| transcriptional regulator [Agrobacterium radiobacter K84]
          Length = 297

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 1/100 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           R+ I GIG SG + +  A   +  G PS+ ++    +  + L  +   D +I++++  + 
Sbjct: 148 RIGIFGIGASGVLATYAARLFSRNGYPSYALNLTGIALAEQLLTMEEGDALIMMAYGRAH 207

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
            E    +  A+R  IP++ +  +  +V+  HAD  + +P+
Sbjct: 208 REGMTTITEAQRLGIPIVMLLGQEDTVLRKHADASIIIPR 247


>gi|116049806|ref|YP_791387.1| CBS domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585027|gb|ABJ11042.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 385

 Score = 40.8 bits (94), Expect = 0.32,   Method: Compositional matrix adjust.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 9/105 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSVEDVMIK 291
           DA   L + R   + V+DE ++L GI+T+ D+ ++F  D         L    ++ +M  
Sbjct: 263 DAWKQLQDHRLKALPVLDEHRRLAGIVTQSDLLKHFRPDGSPFKRLRFLRGTKLKTIMTT 322

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  DT     + LL    +  L V+++    +GIV   DL+
Sbjct: 323 PVVCVQADTHAVELVSLLSDEGLHCLPVLNEAGYLVGIVSQTDLI 367


>gi|319790005|ref|YP_004151638.1| Cl- channel voltage-gated family protein [Thermovibrio ammonificans
           HB-1]
 gi|317114507|gb|ADU96997.1| Cl- channel voltage-gated family protein [Thermovibrio ammonificans
           HB-1]
          Length = 580

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 52/103 (50%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           P+I A  I++++    + +V  G+K+ GI+T  D+ +   + +    V+++M   P+ +L
Sbjct: 472 PVIKAKEIMAKRFIAGIPIVI-GKKVVGIVTTSDVLKVEPEKMKETKVKEIMTPKPRCVL 530

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
            D  L   M++          VV D +  + +GI+   D+ R+
Sbjct: 531 PDWDLLEVMRIFTSEGYGRAPVVKDFESMELVGIISRSDIARY 573


>gi|314937703|ref|ZP_07845026.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a04]
 gi|314948821|ref|ZP_07852192.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0082]
 gi|314950831|ref|ZP_07853901.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133A]
 gi|314995651|ref|ZP_07860742.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a01]
 gi|313590124|gb|EFR68969.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a01]
 gi|313596964|gb|EFR75809.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133A]
 gi|313642906|gb|EFS07486.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a04]
 gi|313644764|gb|EFS09344.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0082]
          Length = 303

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 147 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 204

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 205 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 260

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 261 AFDYVLNTLFSVIYSQNFEEN 281


>gi|168028312|ref|XP_001766672.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682104|gb|EDQ68525.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKN 292
           G  + DA   ++ +R     +VD    L GIIT+ D+  R   + L     SV  VM KN
Sbjct: 83  GSTVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEDTSVSKVMTKN 142

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  ++ DTL   A+Q + Q     L VV++ +    +V  LD+ +
Sbjct: 143 PVFVMGDTLAVEALQKMVQGKFRHLPVVENGE----VVALLDITK 183


>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
           furiosus (SwissProt Accession Number P42851); orfX
           protein; Method: conceptual translation supplied by
           author [Methanopyrus kandleri]
          Length = 172

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 236 GCPLIDAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           G P   A+ I   + E   G V +V+E  +  GIITE D+        K+ + +   D+M
Sbjct: 17  GSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    + ED  +  A++L+    I  L +VDD  K IGIV   D+L+ 
Sbjct: 77  SQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQV 125


>gi|116493109|ref|YP_804844.1| transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
 gi|116103259|gb|ABJ68402.1| Transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
          Length = 277

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 11/124 (8%)

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L +T+       F +   EA+      ++++D+++++S SG + +  A+   A+  +IPL
Sbjct: 150 LRTTIEPIYASDFHMQLMEAAR-----LSKNDVMLLVSHSGENRDALALAEVAKERNIPL 204

Query: 142 IAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDAL--AIALLESRN 198
           I ITS   S ++  AD+ L ++ +E    P  L    + I Q++I D L   IA+   RN
Sbjct: 205 ILITSSANSTLSKKADVTLVSVAEESLYRPDALH---ALIAQISIMDTLFMMIAIKTKRN 261

Query: 199 FSEN 202
            + N
Sbjct: 262 IATN 265


>gi|302038927|ref|YP_003799249.1| hypothetical protein NIDE3646 [Candidatus Nitrospira defluvii]
 gi|300606991|emb|CBK43324.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 163

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED----------- 287
           L  A  + +E  F  + VV +G++L GII++ D+ +    ++ TLS  D           
Sbjct: 44  LARARDLFNEFHFHHLLVV-QGRELLGIISDRDLLKAVSPNIGTLSETDRDRATLNKRAH 102

Query: 288 -VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M +    +  DT +  A +LL +H +S L VV       GI+ + DLLR
Sbjct: 103 QIMSRKLITVAADTTVETAARLLLEHRVSCLPVVTTTGHLEGIITWQDLLR 153


>gi|212711533|ref|ZP_03319661.1| hypothetical protein PROVALCAL_02606 [Providencia alcalifaciens DSM
           30120]
 gi|212685635|gb|EEB45163.1| hypothetical protein PROVALCAL_02606 [Providencia alcalifaciens DSM
           30120]
          Length = 286

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 53/191 (27%), Positives = 83/191 (43%), Gaps = 18/191 (9%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLES--SLQGELSF-QFHCAVEKIKAIKGRVVITGI 72
           HS + N   Q     ++A+K  L    S       L F QF   +++I + + RV I GI
Sbjct: 85  HSALHNRITQTDSLMVVAQKLALEKNYSITETTKRLDFKQFEKIIQRIDSAQ-RVQIVGI 143

Query: 73  GKSGHIGSKLASTLASTG-----TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           G SG     L+  L   G      P   V  A A       +T  D+ IV+S+SG   ++
Sbjct: 144 GGSGLTAKDLSYKLQKIGITTLVEPDHHVQIAAAL-----TLTPQDVQIVISFSGKRKDM 198

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIG 186
                   +    +IAIT    S +A  +D +L ++ +E E     ++  T+   Q  + 
Sbjct: 199 LTAANIGHQNGACVIAITRSKDSPLAQMSDYMLESVAEENEWRSSSISSRTA---QNTLT 255

Query: 187 DALAIALLESR 197
           D L +ALL+ R
Sbjct: 256 DLLFMALLQKR 266


>gi|126179739|ref|YP_001047704.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125862533|gb|ABN57722.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 315

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ I+  K  G + + D   +LKGI+TE D+ +    + +    ED+M  + +V   DT
Sbjct: 140 DAVEIIVNKNIGGIPITDAEGELKGIVTERDVMKVLATEHSGRKAEDIMNASVRVTGPDT 199

Query: 301 LL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  V  +++R     + +V DD     GIV   D++ +
Sbjct: 200 PIGNVCREMVRCRFRRLPVVADDV--LCGIVTATDIMSY 236


>gi|311031331|ref|ZP_07709421.1| hypothetical protein Bm3-1_12426 [Bacillus sp. m3-13]
          Length = 435

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           ++D+  K++G++T  D+     KD  TL +E VM KNP  +   T +  A  ++    I 
Sbjct: 226 IIDKNLKVQGVVTSKDVL---GKDSGTL-IEKVMTKNPITVNGKTSVASAAHIMVWEGIE 281

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           +L VVD   + +GI+   D+L+
Sbjct: 282 MLPVVDPNHRLLGIISRQDVLK 303


>gi|148553329|ref|YP_001260911.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas wittichii RW1]
 gi|148498519|gb|ABQ66773.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas wittichii RW1]
          Length = 485

 Score = 40.8 bits (94), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  +++  +   + VV+   KL GI+T  D+   F ++ N    E +  +N  V+  
Sbjct: 104 LADAHELMARNKISGIPVVEADGKLVGILTNRDV--RFAENPNQPVSELMTSQNLAVVRS 161

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 A + L Q  I  L+VVDD  + +G++   D+
Sbjct: 162 GVSQEEARRTLHQRRIEKLLVVDDAYRCVGLITVKDM 198


>gi|333026590|ref|ZP_08454654.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces sp.
           Tu6071]
 gi|332746442|gb|EGJ76883.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces sp.
           Tu6071]
          Length = 500

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V VVD   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 113 LQEADAICAKFRISGVPVVDGAGKLLGIVTNRDMA--FETD-RSRKVREVMTPMPLVTGK 169

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM LLR+H I  L +VDD     G++   D ++
Sbjct: 170 VGISGVDAMGLLRRHKIEKLPLVDDAGVLKGLITVKDFVK 209


>gi|325968965|ref|YP_004245157.1| signal transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708168|gb|ADY01655.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 297

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 54/100 (54%), Gaps = 1/100 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  + +EK+   + ++D+  ++ G+IT  +I R +++      V D   ++   I +
Sbjct: 194 LKDAAKVFAEKKIRALPIIDDEGRIVGLITTSEIARAYYEGNLNAKVGDYARRDVPTIDK 253

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L  AM+L+  + I  L+VV    K +GI+   D+L++
Sbjct: 254 EADLYDAMRLMTVNKIGRLIVV-SGGKPVGIITRTDILQY 292


>gi|313127525|ref|YP_004037795.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293890|gb|ADQ68350.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 134

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 12/105 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGD----IFRNFHKDLNTLS---VEDVMIKNP 293
           DA  ++ E   G V +VD+G +L GI+T  D    +     KD   +S     DV+    
Sbjct: 25  DAAKLMMENGVGSVLIVDDGNQLLGILTTTDFVQIVAERQPKDQTPVSEYMTSDVVTTTA 84

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V ++D   T     + QH    + VVDD +  IGI+   DL  +
Sbjct: 85  QVPIQDVADT-----MMQHGFHHVPVVDDDEGVIGIISTTDLASY 124


>gi|150388740|ref|YP_001318789.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus
           metalliredigens QYMF]
 gi|149948602|gb|ABR47130.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus
           metalliredigens QYMF]
          Length = 485

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LED 299
           DA+ ++   R   V +V EG KL GIIT  DI   F KD     + +VM K+  +  LE 
Sbjct: 109 DALELMERYRISGVPIVVEG-KLVGIITNRDI--RFEKDYQR-PISEVMTKDSLITALEG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A Q+L  H I  L +VD      G++   D+
Sbjct: 165 ISMDEAQQILMAHKIEKLPIVDQNHNLKGLITIKDI 200


>gi|229102862|ref|ZP_04233556.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-28]
 gi|228680535|gb|EEL34718.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-28]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 48/158 (30%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 43  SSLQGELSFQFHCAVEK-IKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           + LQ  L      A+EK ++A++   R+   G G SG I          TG       A 
Sbjct: 109 TGLQDTLHLLNDTALEKAVRALQEANRIEFYGNGGSGIIAMDAYHKFMRTGISCI---AH 165

Query: 100 EASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             SH  +   G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A
Sbjct: 166 TDSHFQIMGAGLLTKEAVVIAISHSGSNKGLLEALEVAKARGACIIAITSYQKSALSQLA 225

Query: 157 DIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           DI L T  +E E        ++S + QL++ D L + L
Sbjct: 226 DITLYTSTRETEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|170077188|ref|YP_001733826.1| voltage gated chloride channel [Synechococcus sp. PCC 7002]
 gi|169884857|gb|ACA98570.1| Voltage gated chloride channel [Synechococcus sp. PCC 7002]
          Length = 878

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D + ILSE       V+ +G KL GI+T+GD+ +   +  N L+V  VM +    +  
Sbjct: 463 LKDLVPILSESPHRGFPVLKQG-KLVGIVTQGDLAQMAAQGKN-LTVAQVMQRKVITVSP 520

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L+  + LL ++ IS L VVD+ Q   GI+   D++R
Sbjct: 521 RASLSDVLYLLNRYQISRLPVVDNDQLQ-GIITRSDIIR 558


>gi|72161349|ref|YP_289006.1| CBS domain-containing protein [Thermobifida fusca YX]
 gi|71915081|gb|AAZ54983.1| CBS domain protein [Thermobifida fusca YX]
          Length = 144

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 6/119 (5%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
           A D+MH G  +  ++    L+ A  ++ +   G + +  E  +LKGIIT+ DI       
Sbjct: 4   AKDIMHEG--VQCIETNTNLVTAARMMRDLGVGALPICGEDNRLKGIITDRDIVVKCLAE 61

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            KD NT +  ++    P  +     +   +Q + QH +  + V+++ ++ +GIV   DL
Sbjct: 62  GKDPNTCNAIELAEGTPFYVDASDDIETLLQEMTQHKVKRMPVIEN-KQLVGIVSEADL 119


>gi|294497778|ref|YP_003561478.1| RpiR family transcriptional regulator [Bacillus megaterium QM
           B1551]
 gi|294347715|gb|ADE68044.1| transcriptional regulator, RpiR family [Bacillus megaterium QM
           B1551]
          Length = 284

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
            A E I   K RV + G G S  +       L      + F   +  SH  + M   +T+
Sbjct: 125 AAAEAIHGAK-RVFLYGAGGSSVVALDAQYKLLRIDISALF---SLDSHVQMVMATNMTK 180

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD++ V+S SG + E+  ++  A+     +I +T    S  +  ADI+LT+  E +    
Sbjct: 181 DDVLFVVSTSGQTKEVIELMQIAKDKGAAVILLTQHGSSPASRLADILLTISVEEQHIRI 240

Query: 172 GLAPTTSAIMQLAIGDALAIAL 193
           G    ++ I QLAI DA+ I L
Sbjct: 241 G--TMSARIAQLAIVDAMFIRL 260


>gi|289641114|ref|ZP_06473282.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca
           glomerata]
 gi|289509055|gb|EFD29986.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca
           glomerata]
          Length = 516

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A  +++  R   V V +   +L GI+T  DI   F +D ++ SV DVM   P V     
Sbjct: 125 EANELMARYRISGVPVTESDGRLLGIVTNRDI--RFERD-HSRSVRDVMTPMPLVTAPVG 181

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                A+ LLR+H I  L +VDD  +  G++   D  +
Sbjct: 182 VSADDALALLRRHKIEKLPLVDDRGRLRGLITVKDFTK 219


>gi|238060710|ref|ZP_04605419.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
 gi|237882521|gb|EEP71349.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
          Length = 304

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 10/121 (8%)

Query: 48  ELSFQFHCAV--EKIKAI--KGRVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAE 100
           E + Q   AV  + ++AI   GR+ + G G SG + S     L   G  +F+   VH A 
Sbjct: 126 ETAEQLDPAVCEQVVEAIVGAGRIEVYGAGASGFVASDFQQKLHRIGRMAFYFPDVHTAL 185

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
            S   LG   + D+ + +S SG++ ++  +L  AR      +A+T+  +S +   AD VL
Sbjct: 186 TSAALLG---KGDIAVGISHSGTTSDVIEVLEQARSRGAGTVALTNFPRSPITDVADFVL 242

Query: 161 T 161
           T
Sbjct: 243 T 243


>gi|163751908|ref|ZP_02159121.1| CBS domain protein [Shewanella benthica KT99]
 gi|161328191|gb|EDP99356.1| CBS domain protein [Shewanella benthica KT99]
          Length = 515

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQ 307
           R   V V+D  Q L GI+T+ D+  R   + L+  L V   M   PK +   +L+  AM 
Sbjct: 123 RVSSVLVIDNHQ-LVGILTDRDLRNRVLAEGLDGHLPVHQAMTTRPKTLTSSSLVFEAML 181

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ +H+I+ L +VD+  K IGI+   D+LR
Sbjct: 182 LMSEHSINHLPIVDEG-KPIGIITSTDILR 210


>gi|73669912|ref|YP_305927.1| homoserine O-acetyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72397074|gb|AAZ71347.1| homoserine O-acetyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 579

 Score = 40.8 bits (94), Expect = 0.34,   Method: Compositional matrix adjust.
 Identities = 24/90 (26%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A T++ +K+   + VV E  KL+GI+T  DI +     +  L  ++++ ++ K +    
Sbjct: 479 NASTLMVKKKVNHLPVVSEDGKLEGIVTSWDITKAVACKITEL--DEIITRDVKYVFSGD 536

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +  A  ++   +IS L V+D   + IG+V
Sbjct: 537 KIETASSIMEDFSISALPVIDSENRVIGMV 566


>gi|116749553|ref|YP_846240.1| inosine-5'-monophosphate dehydrogenase [Syntrophobacter
           fumaroxidans MPOB]
 gi|116698617|gb|ABK17805.1| inosine-5'-monophosphate dehydrogenase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 491

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 19/114 (16%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           P  KIG    + + ++S  R   V VV +G++L GIIT  D+   F  D  ++ V +VM 
Sbjct: 105 PDQKIG----EVLDLMSRYRISGVPVV-KGERLVGIITNRDL--RFETD-ESIKVSEVMT 156

Query: 291 KNPKVI------LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+  V       LED+      +LL++  I  L+VVDD  +  G++   D+++ 
Sbjct: 157 KDDLVTAPVGISLEDS-----KKLLQKRRIEKLLVVDDSGRLKGLITIKDIMKI 205


>gi|153001495|ref|YP_001367176.1| nucleotidyl transferase [Shewanella baltica OS185]
 gi|160876232|ref|YP_001555548.1| nucleotidyl transferase [Shewanella baltica OS195]
 gi|151366113|gb|ABS09113.1| Nucleotidyl transferase [Shewanella baltica OS185]
 gi|160861754|gb|ABX50288.1| Nucleotidyl transferase [Shewanella baltica OS195]
 gi|315268421|gb|ADT95274.1| Nucleotidyl transferase [Shewanella baltica OS678]
          Length = 350

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M++G    ++K    ++ AI IL+ +    V VV++   L+G IT+GDI R   + ++  
Sbjct: 1   MNNGWKKSVIKPSDTILRAIEILNNEVLKVVLVVNDSGCLRGTITDGDIRRGILRGVSLQ 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            SVE++M  NP   +  T      +++ Q +I+ + ++D+
Sbjct: 61  SSVEEIMFVNPVTAINGTPKRELAKIMDQKSITSIPILDN 100


>gi|302332284|gb|ADL22477.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 182

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/145 (22%), Positives = 62/145 (42%), Gaps = 8/145 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG + +  A  L   G  +  V  +         I  +D+ +++S SGS++ 
Sbjct: 39  IFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTP-----AIKSNDVFVIISGSGSTEH 93

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L+ +   A+     ++ IT+   S +   A   + LP   +   HG A    ++ + A  
Sbjct: 94  LRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEHGSAQPLGSLFEQASQ 153

Query: 187 ---DALAIALLESRNFSENDFYVLH 208
              D++ + L+   N SE      H
Sbjct: 154 LFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|20094305|ref|NP_614152.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887351|gb|AAM02082.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 138

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 57/105 (54%), Gaps = 5/105 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVI 296
           +I+A  I+ +   G + VVD+  +L G++T  D+ R   +D      +VE+VM ++  V+
Sbjct: 29  VIEAFEIMLKHDVGALPVVDDEGRLIGLVTRTDLGRALLEDEYEPGTTVEEVMERDVVVV 88

Query: 297 LEDTLLTVAMQLLRQHNISV---LMVVDDCQKAIGIVHFLDLLRF 338
             D  L  A++ +      +   L VVDD +K +GI+   D+LR+
Sbjct: 89  HPDDTLLEALKRMTSAPEGIYNQLPVVDDEEKLVGILTDGDILRW 133


>gi|56478249|ref|YP_159838.1| putative nucleotidyltransferase [Aromatoleum aromaticum EbN1]
 gi|56314292|emb|CAI08937.1| putative nucleotidyltransferase [Aromatoleum aromaticum EbN1]
          Length = 632

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            V  G  +  A+  +SE R GC+ +VD  Q+  GI+T+ D+         DL    V +V
Sbjct: 180 FVTPGTSIRAALEKMSEMRLGCMVIVDAEQRPVGILTQSDLLSRIVLPAIDLQR-PVSEV 238

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++P  +        A   +  H +  L+V D   +  G+V   DL 
Sbjct: 239 MTRDPHRMPASASAYDAALEMATHGVRHLLVTDSDDRLKGVVSERDLF 286


>gi|191637238|ref|YP_001986404.1| 6-phospho-3-hexuloisomerase [Lactobacillus casei BL23]
 gi|190711540|emb|CAQ65546.1| 6-phospho-3-hexuloisomerase [Lactobacillus casei BL23]
 gi|327381277|gb|AEA52753.1| Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Lactobacillus casei LC2W]
 gi|327384448|gb|AEA55922.1| Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Lactobacillus casei BD-II]
          Length = 187

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 19/168 (11%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD--LGMI 109
           Q   A+  I   K R+ + G G+SG      A+ L   G  S FV       GD     I
Sbjct: 24  QLQSAINSIMNAK-RIFLAGAGRSGFAARGFANRLMHLGFHSNFV-------GDTVTPSI 75

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK----- 164
            + DL+I+ S SG +  L +    A++    +  +T   ++ +   +D  + +P      
Sbjct: 76  QKGDLLIIGSGSGETASLVSDAKKAKQVGAHIGTLTIFPENTIGSLSDWHIVIPGVTSKV 135

Query: 165 EPESCPHG--LAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
           + E+  HG  + P  S+  QL+  + DAL + L++     +N+ +  H
Sbjct: 136 DGENTEHGQSIQPHGSSFEQLSWLVYDALVVYLMQETKQGDNEMFARH 183


>gi|220932880|ref|YP_002509788.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
           168]
 gi|219994190|gb|ACL70793.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
           168]
          Length = 486

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 24/99 (24%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           +++A  ++S+ +   V +VDE +KL GIIT  D+   +++++ ++ +  ++ ++  P   
Sbjct: 106 IVEAEALMSKFKISGVPIVDENRKLVGIITNRDLRFVKDYNRPIHEVMTDEDLVTAPV-- 163

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              T +  A ++L++H I  L +VD+     G++   D+
Sbjct: 164 --GTTIEQAKEILQEHKIEKLPLVDENNILKGLITIKDI 200


>gi|256783098|ref|ZP_05521529.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|289766981|ref|ZP_06526359.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|289697180|gb|EFD64609.1| transcriptional regulator [Streptomyces lividans TK24]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G+G S  +G  L   L   G  +F      A+     ++   D+ + +S SG ++
Sbjct: 156 RVDIFGVGASAFVGQDLHQKLHRIGRMAFIWSDRHAALTATALLGPGDVALAVSHSGETE 215

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +    L  A       IA+T++  S +A  AD+VLT        P     T S I QLA+
Sbjct: 216 DTTEPLQAAAERGATTIALTNDPGSTLAAGADLVLTTCA--RETPFRSGATVSRIAQLAV 273

Query: 186 GDALAIALLE 195
            D L + + +
Sbjct: 274 IDCLFVGVAQ 283


>gi|191639278|ref|YP_001988444.1| YqzB [Lactobacillus casei BL23]
 gi|190713580|emb|CAQ67586.1| YqzB [Lactobacillus casei BL23]
 gi|327383359|gb|AEA54835.1| CBS domain containing protein [Lactobacillus casei LC2W]
 gi|327386542|gb|AEA58016.1| CBS domain containing protein [Lactobacillus casei BD-II]
          Length = 207

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDC 323
            P VI    DT +  A +LL +HN+  L VV + 
Sbjct: 150 MPNVITVSADTSIIAASKLLLKHNVDSLPVVQNA 183


>gi|192290879|ref|YP_001991484.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
 gi|192284628|gb|ACF01009.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
          Length = 498

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV   Q     KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LADALALMNQYGFSGIPVVTGAQGHGPGKLVGILTNRDV--RFATDPAQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL QH I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|20178342|sp|P50100|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
 gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 196

 Score = 40.4 bits (93), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 236 GCPLIDAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           G P   A+ I   + E   G V +V+E  +  GIITE D+        K+ + +   D+M
Sbjct: 17  GSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    + ED  +  A++L+    I  L +VDD  K IGIV   D+L+ 
Sbjct: 77  SQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQV 125


>gi|91793317|ref|YP_562968.1| CBS domain-containing protein [Shewanella denitrificans OS217]
 gi|91715319|gb|ABE55245.1| CBS domain protein [Shewanella denitrificans OS217]
          Length = 136

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 13/108 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------NFHKDLNTLS--VEDVM 289
           A  I    +F  + V+DE  +L+G+++  D+ R           F +D +TL   V  VM
Sbjct: 25  AKDIFDNVKFNHLLVIDEDNQLQGVLSHRDLVRALSPNLGTAAEFVRDTDTLQKRVHQVM 84

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +P  +  D  +  A QL+ +H I  L V+++    +GI+ + DLLR
Sbjct: 85  SHDPITVAPDIDIKQASQLILKHGIGCLPVLEN-NIILGIITWKDLLR 131


>gi|39935269|ref|NP_947545.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           CGA009]
 gi|39649121|emb|CAE27641.1| inosine monophosphate dehydrogenase [Rhodopseudomonas palustris
           CGA009]
          Length = 498

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV   Q     KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LADALALMNQYGFSGIPVVTGAQGHGPGKLVGILTNRDV--RFATDPAQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL QH I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|325847125|ref|ZP_08169951.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481097|gb|EGC84142.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 499

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 14/105 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-- 296
           L +A+ I++  R   V +VD+   LKGI+T  D+   F  D N + ++D+M K+  ++  
Sbjct: 105 LKEALQIMANYRISGVPIVDDQMTLKGILTNRDV--RFQNDEN-VKIDDIMTKDGLIVGH 161

Query: 297 ----LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +ED     A++ +    +  L +VDD  K  G++   D+ +
Sbjct: 162 VGISMED-----AVKKMESGKVEKLPIVDDDYKLKGLITIKDIEK 201


>gi|257887443|ref|ZP_05667096.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,141,733]
 gi|257823497|gb|EEV50429.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,141,733]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 42/178 (23%), Positives = 76/178 (42%), Gaps = 14/178 (7%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAS 88
           IA+K    S++S  + +L  + H  +E I  +     R+ +   G S     K  + +  
Sbjct: 99  IAKKMADLSIQSIKKAQLQIE-HQDLENISKVLNNAQRIFLFAKGDSQITARKFQNKMVK 157

Query: 89  TGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                F + A E S    +   +T +D  + +S+SG     + I+ Y +    P + IT 
Sbjct: 158 LN--KFLILAEEYSDSSWNAANLTSEDCAVFISYSGRIHHYERIMTYLKHVGAPTLLITG 215

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRNFSEN 202
              S +A  AD+ L + +E     +  A   +   Q+A    L    +++ S+NF EN
Sbjct: 216 NQHSEMAKQADMCLVISQE----EYDFAKVATFSSQIAFDYVLNTLFSVIYSQNFEEN 269


>gi|322420873|ref|YP_004200096.1| CBS domain-containing protein [Geobacter sp. M18]
 gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
          Length = 217

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 13/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           +A+ ++ EK+   + VVD   KL GI+++ D+ +              H  L  L+VE  
Sbjct: 22  EALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSATSLAIWEIHDLLAKLTVEKC 81

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K    + EDT L  A +++    I  L V+ + +K +GI+   DL +
Sbjct: 82  MAKEVITVPEDTPLEEAARIMVDRRIGGLPVM-NGEKLVGIITESDLFK 129



 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D M  NP  I+ D  +T A++L+ +  I  L VVD   K +GIV   DLL+
Sbjct: 3   VRDRMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLK 55


>gi|55377889|ref|YP_135739.1| hypothetical protein rrnAC1071 [Haloarcula marismortui ATCC 43049]
 gi|55230614|gb|AAV46033.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 128

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           V  G P +D    + ++    V +VDE  + +GI+T  D  R      D    +V + M 
Sbjct: 17  VTAGEPALDVAAAMDDQSIKSVVIVDEACQPEGILTSTDYVRMTADGVDPTEATVGEHMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +      +T L+     +  +NIS + VVDD  +  GI+   DL  +
Sbjct: 77  TDIVTTSPETALSAVASTMWDNNISHVPVVDDENRVTGILSATDLTVY 124


>gi|284163557|ref|YP_003401836.1| MaoC domain protein dehydratase [Haloterrigena turkmenica DSM 5511]
 gi|284013212|gb|ADB59163.1| MaoC domain protein dehydratase [Haloterrigena turkmenica DSM 5511]
          Length = 314

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 3/82 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILED 299
           A T+L ++    V VV +G+ + GI+TEGD   +     DL ++ + DV+    + I  D
Sbjct: 27  AATLLRDEGVSSVVVVRDGEPI-GIVTEGDFLEHLCERTDLGSVELTDVLSAPLETIAPD 85

Query: 300 TLLTVAMQLLRQHNISVLMVVD 321
           T +  A+ +LR+     L VVD
Sbjct: 86  TSIVDAVAILRESGFEHLPVVD 107


>gi|297192632|ref|ZP_06910030.1| inosine 5' monophosphate dehydrogenase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722967|gb|EDY66875.1| inosine 5' monophosphate dehydrogenase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 499

 Score = 40.4 bits (93), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+     + + T  V +VM   P V  +
Sbjct: 113 LAEADALCAKFRISGVPVTDAAGKLLGIVTNRDMA---FETVRTRQVREVMTPMPLVTGK 169

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 170 VGISGVDAMELLRRHKIEKLPLVDDAGILKGLITVKDFVK 209


>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
 gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
          Length = 143

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 61/111 (54%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
           ++  P+ +A+++L+ KR G + V+ +G K+ GII+E D+     +   D   ++V D+M 
Sbjct: 19  EVTTPVAEAVSLLAGKRIGALPVMRDG-KIAGIISERDVVYRLAESGHDALDMTVGDIM- 76

Query: 291 KNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +P V +E  TL+  A+ L+ +       VVD+  K +  +   DL++  I
Sbjct: 77  TSPAVTVEPTTLIDDALALMTKRRFRHFPVVDN-DKLVAFISIGDLVKHKI 126


>gi|94969644|ref|YP_591692.1| N-acetylmuramic acid-6-phosphate etherase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94551694|gb|ABF41618.1| sugar isomerase (SIS) [Candidatus Koribacter versatilis Ellin345]
          Length = 304

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 22/125 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASH-----GDL 106
           GR++  G G SG IG+  AS    T             G      +A EAS      G  
Sbjct: 69  GRLIYVGTGTSGRIGALDASECPPTFNTRPEQVQYLIAGGEQALANAVEASEDSREVGQA 128

Query: 107 GMITRD----DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            M  R     D++I L+ SG +    A + YARR     +AI    +S +A  AD+ + +
Sbjct: 129 DMAKRKPGKKDVVIGLAASGRTPYTIAAMEYARRKGSKTVAIVCNPESPLADAADVAIEV 188

Query: 163 PKEPE 167
              PE
Sbjct: 189 EVGPE 193


>gi|260559812|ref|ZP_05831991.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|260074036|gb|EEW62359.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|281412386|ref|YP_003346465.1| RpiR family transcriptional regulator [Thermotoga naphthophila
           RKU-10]
 gi|281373489|gb|ADA67051.1| transcriptional regulator, RpiR family [Thermotoga naphthophila
           RKU-10]
          Length = 280

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 11/97 (11%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVL-T 161
           L   T DDL++ +S +G   E  AI+ +A++     IP++ IT   KS V  ++D+VL T
Sbjct: 172 LATATPDDLLVAISHTG---ETIAIVNFAKKAKEKGIPVVTITGNRKSTVTRYSDVVLVT 228

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             KE +     +   TS I+QL I D +   LL +R+
Sbjct: 229 NTKETKIRTDAM---TSRIVQLVILDTI-YTLLAARD 261


>gi|291615020|ref|YP_003525177.1| diguanylate cyclase with PAS/PAC sensor [Sideroxydans
           lithotrophicus ES-1]
 gi|291585132|gb|ADE12790.1| diguanylate cyclase with PAS/PAC sensor [Sideroxydans
           lithotrophicus ES-1]
          Length = 961

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVI 296
           L+ A+ ++  +R  CV VV E ++  GI+TE D+ R + ++   + V   +VM      I
Sbjct: 154 LMQALNLMQAQRESCVVVV-EDERPIGIVTERDVVRFYSREPAQVGVHLAEVMTSPVLTI 212

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D  +  A +L+    +  L++VD   +  G+V   DL
Sbjct: 213 RSDATINEAAELMLARKVRHLVLVDSAGRMAGLVSEHDL 251


>gi|240103611|ref|YP_002959920.1| hypothetical protein TGAM_1554 [Thermococcus gammatolerans EJ3]
 gi|239911165|gb|ACS34056.1| Conserved hypothetical protein, containing CBS domains
           [Thermococcus gammatolerans EJ3]
          Length = 176

 Score = 40.4 bits (93), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           IL+  R G  AVV E  ++ G++T+ DI        KD   + V D+M +NP  I +D  
Sbjct: 29  ILARNRVGS-AVVVENDEIVGVVTDRDILDKVVAKGKDPKKVKVRDIMTQNPVTIEDDYS 87

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ A+  + +  I  L+V     + IG V   DLL
Sbjct: 88  ISDAIDRMMEKGIRRLLVT-RLGRPIGFVTAADLL 121


>gi|229818490|ref|ZP_04448771.1| hypothetical protein BIFANG_03798 [Bifidobacterium angulatum DSM
           20098]
 gi|229784360|gb|EEP20474.1| hypothetical protein BIFANG_03798 [Bifidobacterium angulatum DSM
           20098]
          Length = 517

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM-----IKNPKVILEDTLLTV 304
           R   + VVD+  KL GIIT  D+     +D +TL V+DVM     I  P  I +D     
Sbjct: 135 RISGLPVVDKDNKLVGIITNRDMRFIPSEDYDTLKVKDVMTRENLITGPTNISKDD---- 190

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A +LL +H +  L +VD      G++   D ++
Sbjct: 191 AHRLLAKHKVEKLPLVDSEGHLTGLITVKDFVK 223


>gi|84490211|ref|YP_448443.1| hypothetical protein Msp_1429 [Methanosphaera stadtmanae DSM 3091]
 gi|84373530|gb|ABC57800.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 56/107 (52%), Gaps = 7/107 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ++D  T++ E+  G + +++  +K+ GI+TEGDI +   K    L V+D+M  N      
Sbjct: 125 IVDTTTLMLEEGIGGLPIINNDEKIVGIVTEGDIVKKLGKLCADLEVQDIMATNVITTTP 184

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQ-------KAIGIVHFLDLLRF 338
            T +    +++ ++++  + +V + Q       K +G V   D+L++
Sbjct: 185 GTPIEGIAKIMVRNSLRRVPIVGEDQESQSKEEKLLGFVTASDILKY 231


>gi|294339252|emb|CAZ87608.1| Putative HPP family protein [Thiomonas sp. 3As]
          Length = 360

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 2/86 (2%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           R+G V  +D    L+G++ +    + + + L+++   D+M ++ +    D  +  A+  L
Sbjct: 192 RYGEVLDIDRA-TLRGLLEDAQT-QAYQQRLDSVRCSDIMQRDVQTARPDDSVADALHRL 249

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDL 335
            +H I  L V+D  ++ IGIV   DL
Sbjct: 250 EEHGIKALPVIDAQRQVIGIVTAADL 275


>gi|294142017|ref|YP_003557995.1| acetoin utilization protein AcuB [Shewanella violacea DSS12]
 gi|293328486|dbj|BAJ03217.1| acetoin utilization protein AcuB, putative [Shewanella violacea
           DSS12]
          Length = 138

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 41/135 (30%), Positives = 63/135 (46%), Gaps = 16/135 (11%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L +  SD+M S   I  +++   L  A  I     F  + V+ E  KL+GI++E D  R
Sbjct: 4   NLNIRVSDIMTS--RIVTIEMDDRLTVAKEIFDNAPFHHLLVI-EHNKLRGILSERDYLR 60

Query: 275 NF----------HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                        +D  TL      VM ++P  I  +  +  A +LL QH+I  L V+D 
Sbjct: 61  ALSPNIGNINETERDSETLQKRAHQVMTRSPVTIAPNQTIKQAGELLLQHDIGSLPVLDK 120

Query: 323 CQKAIGIVHFLDLLR 337
             K +GI+ + DLL+
Sbjct: 121 G-KLVGIITWKDLLK 134


>gi|297566505|ref|YP_003685477.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
 gi|296850954|gb|ADH63969.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
          Length = 209

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 54/113 (47%), Gaps = 14/113 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------ 284
            P++DA+ +L E  F  + V+D GQ L GI+T+ D+         TLS            
Sbjct: 18  TPVLDALKLLKEHSFRRLPVMD-GQNLVGIVTDKDLKDAMPSKATTLSVWELNYLLAKLT 76

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V +VM K    I  D  L  A  L++++ +  L V +  Q  +GI+   D+L+
Sbjct: 77  VHEVMAKPVITIEADQPLEDAALLMQEYKVGGLPVTEGGQ-LVGIITVTDVLK 128


>gi|119899392|ref|YP_934605.1| hypothetical protein azo3102 [Azoarcus sp. BH72]
 gi|119671805|emb|CAL95719.1| conserved hypothetical membrane protein [Azoarcus sp. BH72]
          Length = 409

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 7/90 (7%)

Query: 255 AVVDEGQKLKGIITEG--DIFRN-----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           AV+DE  ++  I  E   D+F       + +   T+   +VM +    +   TLL  A  
Sbjct: 225 AVLDEYNQVLDISREDLRDLFMRAEAHAYRRRFGTVRCHEVMTREVVAVEYGTLLEDAWA 284

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+R H++  L VV+  ++ IGI+   D +R
Sbjct: 285 LMRAHHVKALPVVNRARRVIGILTLADFMR 314


>gi|121998795|ref|YP_001003582.1| CBS domain-containing protein [Halorhodospira halophila SL1]
 gi|121590200|gb|ABM62780.1| CBS domain containing protein [Halorhodospira halophila SL1]
          Length = 144

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 10/110 (9%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLSVE 286
            PL +   +     F  V VVDE  +L G+ T+ D+ + F          +  +    V 
Sbjct: 24  TPLRELQRLFDGHDFNGVPVVDEQGQLLGLATKLDLLKAFTFTPDAMVPRYDAIMERPVH 83

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +VM + P  +  D  LT  +Q +         VVDD  + +G++   DLL
Sbjct: 84  EVMTREPITVAPDLPLTRVLQRMVDMRTKGFPVVDDSSRVVGVIAREDLL 133


>gi|86133263|ref|ZP_01051845.1| inosine-5'-monophosphate dehydrogenase [Polaribacter sp. MED152]
 gi|85820126|gb|EAQ41273.1| inosine-5'-monophosphate dehydrogenase [Polaribacter sp. MED152]
          Length = 491

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 78/172 (45%), Gaps = 21/172 (12%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV-----MHSG-- 227
           P  SA M      +LAIA+       E    VLH   K  T    A +V       SG  
Sbjct: 47  PIVSAAMDTVTESSLAIAIAR-----EGGIGVLH---KNMTTEQQAQEVRKVKRAESGMI 98

Query: 228 -DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            D + L ++   ++DA   + E   G + +VD+   LKGI+T  D+ R  HK  N   + 
Sbjct: 99  LDPVTL-QMDATVLDAKLSMKEHSIGGIPIVDKEGTLKGIVTNRDL-RFEHK--NKRPIV 154

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM     V  +  T L  A ++L+ + I  L++VD   K  G++ F D+ +
Sbjct: 155 EVMTSENLVTADVGTSLKDAEKILQNYKIEKLLIVDADYKLKGLITFRDITK 206


>gi|116495787|ref|YP_807521.1| CBS domain-containing protein [Lactobacillus casei ATCC 334]
 gi|227533651|ref|ZP_03963700.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|301067345|ref|YP_003789368.1| CBS domain-containing protein [Lactobacillus casei str. Zhang]
 gi|116105937|gb|ABJ71079.1| CBS domain containing protein [Lactobacillus casei ATCC 334]
 gi|227188635|gb|EEI68702.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|300439752|gb|ADK19518.1| CBS domain containing protein [Lactobacillus casei str. Zhang]
          Length = 207

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDC 323
            P VI    DT +  A +LL +HN+  L VV + 
Sbjct: 150 MPNVITVTADTSIIAASKLLLKHNVDSLPVVQNA 183


>gi|295703152|ref|YP_003596227.1| RpiR family transcriptional regulator [Bacillus megaterium DSM 319]
 gi|294800811|gb|ADF37877.1| transcriptional regulator, RpiR family [Bacillus megaterium DSM
           319]
          Length = 284

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 9/142 (6%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM---ITR 111
            A E I   K RV + G G S  +       L      + F   +  SH  + M   +T+
Sbjct: 125 AAAEAIHGAK-RVFLYGAGGSSVVALDAQYKLLRIDISALF---SLDSHVQMVMATNMTK 180

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD++ V+S SG + E+  ++  A+     +I +T    S  +  ADI+LT+  E +    
Sbjct: 181 DDVLFVVSTSGQTKEVVELMQIAKDKGAAVILLTQHGSSPASRLADILLTISVEEQHIRI 240

Query: 172 GLAPTTSAIMQLAIGDALAIAL 193
           G    ++ I QLA+ DA+ I L
Sbjct: 241 G--TMSARIAQLAVVDAMFIRL 260


>gi|239906344|ref|YP_002953085.1| hypothetical protein DMR_17080 [Desulfovibrio magneticus RS-1]
 gi|239796210|dbj|BAH75199.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 412

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 25/149 (16%)

Query: 212 KLGTLFVCA---SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           ++  LF C     DVM +   +  V     L + + +L  +    V VVD G+K+ G++T
Sbjct: 101 RMAALFRCPVRVRDVMAA--DVASVGPDTDLGEVVDLLVARHVKAVPVVDAGRKVLGVVT 158

Query: 269 EGDIFRN--------------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            GD+                           L+  +V++VM    + I E T L  A + 
Sbjct: 159 GGDLLTRGGLSARLSLFGLLPADAREEAAAALSGHTVKEVMTAPAETIGERTSLREASER 218

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  +  L VVD+  + IGIV   D+LR
Sbjct: 219 MVKKGLKRLPVVDEAGELIGIVSRTDILR 247


>gi|227892185|ref|ZP_04009990.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           ATCC 11741]
 gi|227865990|gb|EEJ73411.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           ATCC 11741]
          Length = 276

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + G+G SG+   +    L   G  +F    +     D  ++  DD+II +S SG++D
Sbjct: 127 RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSDDVIIAISQSGNTD 186

Query: 126 ELKAILYYARRFSIPLIAIT 145
           ++      A++    +I+IT
Sbjct: 187 DVNVACSLAKQKGTKIISIT 206


>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
           43063]
 gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
           43063]
          Length = 206

 Score = 40.4 bits (93), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 14/113 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTL 283
           G  + DAI ++       + V+ +G KL G++++ D+ R    D            L+ L
Sbjct: 11  GATVPDAIELMQTHGITKLPVLRDG-KLCGVVSQLDLNRALPSDATSLSFGEVAYLLSKL 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++   D+L
Sbjct: 70  KIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDEG-KVVGVITESDVL 121


>gi|21226343|ref|NP_632265.1| hypothetical protein MM_0241 [Methanosarcina mazei Go1]
 gi|20904593|gb|AAM29937.1| hypothetical protein MM_0241 [Methanosarcina mazei Go1]
          Length = 500

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM   D I  +K    + DA   + E  F  +AVV +  +L GI+T  DI +   +++ 
Sbjct: 382 DVMS--DFIVTIKKDQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIF 439

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             SVE VM K       +  + +A + L ++ +S + V+D  +K +GI+
Sbjct: 440 D-SVESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQKKVLGII 487


>gi|115358715|ref|YP_775853.1| CBS domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115284003|gb|ABI89519.1| CBS domain containing membrane protein [Burkholderia ambifaria
           AMMD]
          Length = 391

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDARLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300


>gi|300215481|gb|ADJ79894.1| Transcriptional regulator, RpiR family [Lactobacillus salivarius
           CECT 5713]
          Length = 274

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + G+G SG+   +    L   G  +F    +     D  ++  DD+II +S SG++D
Sbjct: 125 RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSDDVIIAISQSGNTD 184

Query: 126 ELKAILYYARRFSIPLIAIT 145
           ++      A++    +I+IT
Sbjct: 185 DVNVACSLAKQKGTKIISIT 204


>gi|302872663|ref|YP_003841299.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302575522|gb|ADL43313.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 123

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 4/96 (4%)

Query: 248 EKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTV 304
           +KR   VAV VDE   LKGII + DI+R   +     T  VE  M K      ++  +  
Sbjct: 27  QKRKKSVAVIVDENDFLKGIIVKADIYRFLSQPGHYETYPVELAMTKAVITADKNDDIKD 86

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +LLR+++IS + V+DD  K IG++   D++ + I
Sbjct: 87  VAKLLRENDISAVPVLDDG-KVIGLIGLEDIVDYFI 121


>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 283

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D I ++ E +     VVDE   + GIIT  D+     KD  T  V+ +M +   V  ED 
Sbjct: 32  DVIALMKETKHDGYPVVDEEGHIVGIITAYDLLL---KDWETEYVKSIMSQEVIVAREDM 88

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  A +++ +H IS L VVD  +   GI+   D++R  I
Sbjct: 89  HINDASRVMFRHGISRLPVVDKERHVKGIMTNTDIVRSHI 128


>gi|302864554|ref|YP_003833191.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315500847|ref|YP_004079734.1| signal transduction protein with cbs domains [Micromonospora sp.
           L5]
 gi|302567413|gb|ADL43615.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315407466|gb|ADU05583.1| putative signal transduction protein with CBS domains
           [Micromonospora sp. L5]
          Length = 139

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           PL +A  ++ E   G V V D G  L G++T+ DI         D  T ++  ++ +   
Sbjct: 20  PLDEAARVMKESDIGDVVVTD-GATLAGMLTDRDIVVRAVAERADPGTTTIGSIITREVV 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +I +      A  L+R+ NI  ++V D  +K +GIV   DL
Sbjct: 79  MIEQHCTANEAAALMRERNIRRVLVCDSDRKLVGIVSLGDL 119


>gi|212697476|ref|ZP_03305604.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675475|gb|EEB35082.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 483

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 14/105 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-- 296
           L +A+ I++  R   V +VD+   LKGI+T  D+   F  D N + ++D+M K+  ++  
Sbjct: 105 LKEALEIMANYRISGVPIVDDQMTLKGILTNRDV--RFQNDEN-VKIDDIMTKDGLIVGH 161

Query: 297 ----LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +ED     A++ +    +  L +VDD  K  G++   D+ +
Sbjct: 162 VGISMED-----AVKKMESGKVEKLPIVDDDYKLKGLITIKDIEK 201


>gi|188590170|ref|YP_001920853.1| nucleotidyl transferase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500451|gb|ACD53587.1| nucleotidyl transferase [Clostridium botulinum E3 str. Alaska E43]
          Length = 347

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 53/83 (63%), Gaps = 2/83 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VV +G+KL G++T+GDI R   K+ + + S++++M K+PK +LE     V  ++++Q  I
Sbjct: 30  VVVKGKKLIGVVTDGDIRRWILKNGDISKSIDNIMNKSPKYLLEAERDNVK-EIMKQFKI 88

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             + +V++  + I ++ + D+ +
Sbjct: 89  EAVPIVNEEIEVIDVIFWNDVYQ 111


>gi|119468876|ref|ZP_01611901.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
 gi|119447528|gb|EAW28795.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
          Length = 612

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 263 LKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T+ D+      D      +V  +M  NPK I E+  +  A+ L+ ++NI  L V+
Sbjct: 191 LVGVVTDRDLRNRVLADEVDPQEAVSSIMTTNPKFIFENNRVFSALHLMLKYNIHHLPVL 250

Query: 321 DDCQKAIGIVHFLDLLR 337
           D+    IG++   DLLR
Sbjct: 251 DESHNPIGMLTSTDLLR 267


>gi|113969857|ref|YP_733650.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
 gi|114047087|ref|YP_737637.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
 gi|113884541|gb|ABI38593.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
 gi|113888529|gb|ABI42580.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
          Length = 620

 Score = 40.4 bits (93), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILED 299
           A  ++   R   + V D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGRIAVHQAMTTSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++DD      KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDDQNTDEVKAIGMVTSTDILR 272


>gi|147920105|ref|YP_686135.1| homoserine O-acetyltransferase [uncultured methanogenic archaeon
           RC-I]
 gi|110621531|emb|CAJ36809.1| homoserine O-acetyltransferase [uncultured methanogenic archaeon
           RC-I]
          Length = 505

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 2/89 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A  IL +++   + VV    KL GI+T  D+ R   +   TL  + +M      I  D  
Sbjct: 400 AARILVDRKVTHLPVVSGSGKLTGIVTAWDVARAVVERCETL--DQIMTSRVVTIEADAT 457

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           L  A + L +++IS L VVD  +  +GIV
Sbjct: 458 LEAAARKLEKYDISALPVVDKDKNVLGIV 486


>gi|171321618|ref|ZP_02910546.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
 gi|171093102|gb|EDT38322.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
          Length = 391

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDDRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300


>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria IOP40-10]
 gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria IOP40-10]
          Length = 153

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VV EG  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVV-EGDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLIGLISIGDLVK 127


>gi|21225862|ref|NP_631641.1| transcriptional regulator [Streptomyces coelicolor A3(2)]
 gi|11228498|emb|CAC16520.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
          Length = 311

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G+G S  +G  L   L   G  +F      A+     ++   D+ + +S SG ++
Sbjct: 156 RVDIFGVGASAFVGQDLHQKLHRIGRMAFIWSDRHAALTATALLGPGDVALAVSHSGETE 215

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +    L  A       IA+T++  S +A  AD+VLT        P     T S I QLA+
Sbjct: 216 DTTEPLQAAAERGATTIALTNDPGSTLATGADLVLTTCA--RETPFRSGATVSRIAQLAV 273

Query: 186 GDALAIALLE 195
            D L + + +
Sbjct: 274 IDCLFVGVAQ 283


>gi|23016905|ref|ZP_00056657.1| COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 353

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M + D I LV    P++D I IL       V VVD  ++L G IT+GDI R   + L  L
Sbjct: 1   MKNWDQI-LVGPTVPILDVIKILDRFAAQIVLVVDSDRRLLGTITDGDIRRGILRGL-VL 58

Query: 284 SVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 I NPK +  L  +     + L+R   +  L VVD     +G+
Sbjct: 59  DEPATAIMNPKPLTALPSSSPQERLALIRSRRLRHLPVVDAGGVLVGL 106


>gi|332686500|ref|YP_004456274.1| CBS domain containing protein [Melissococcus plutonius ATCC 35311]
 gi|332370509|dbj|BAK21465.1| CBS domain containing protein [Melissococcus plutonius ATCC 35311]
          Length = 167

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 9/107 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------KDLNTLSVEDVMI 290
           PL  A+ +LS+ ++  + V+D+  +  G+I+  DI            K+LN  +V DVM 
Sbjct: 32  PLNHAVLVLSKVKYSKIPVLDKNDQFVGLISLADIMGKMFSITSIDLKNLNKYTVSDVME 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   VI ED  L   +  L   + S L VVD  Q   GI+   ++L+
Sbjct: 92  REVTVIHEDWELEDVLHFLV--DTSFLPVVDKYQCFKGIITRKEILK 136


>gi|300932934|ref|ZP_07148190.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium resistens
           DSM 45100]
          Length = 510

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V D+   L GIIT  D+   F  D     V +VM K P V+ E+ + T  A++L
Sbjct: 130 RISGLPVTDDEGVLVGIITNRDM--RFEPDFER-PVNEVMTKAPLVVAEEGVSTEAALRL 186

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++ +  L +VD   K +G++   D  +
Sbjct: 187 LSENKVEKLPIVDGAGKLVGLITVKDFAK 215


>gi|282856179|ref|ZP_06265462.1| phosphoheptose isomerase [Pyramidobacter piscolens W5455]
 gi|282585938|gb|EFB91223.1| phosphoheptose isomerase [Pyramidobacter piscolens W5455]
          Length = 195

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 7/88 (7%)

Query: 77  HIGSKLASTLAST-GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           H+ +   + +A+  G  + F    EA HG  G     D ++ +S SG S  +      AR
Sbjct: 84  HVNTSALTAIANDFGYETVFSRQVEA-HGRPG-----DTLVAISTSGGSANVVKAAEAAR 137

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLP 163
           R ++ +IA+T E  S++A  AD+VL +P
Sbjct: 138 RKNMRVIAMTGERNSLLAGMADVVLAVP 165


>gi|297203562|ref|ZP_06920959.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
 gi|197714539|gb|EDY58573.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
          Length = 144

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-- 278
           DVM  G  +  V+    L++A  ++  +  G V V D GQ++ G++T+ DI  R      
Sbjct: 8   DVMTPG--VVAVRPDASLVEAARLMRAQDIGDVVVAD-GQRVVGLLTDRDITVRAVADGV 64

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T+S + V   +P  +     +T A+ L+R H +  L VV+D    +G+V   D+
Sbjct: 65  DPQTVSAQSVCTPDPLTVAPGDPVTQAVALMRTHAVRRLPVVEDGLP-VGMVSLGDI 120


>gi|170761179|ref|YP_001788035.1| nucleotidyl transferase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408168|gb|ACA56579.1| nucleotidyl transferase [Clostridium botulinum A3 str. Loch Maree]
          Length = 350

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 55/98 (56%), Gaps = 3/98 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILE 298
           D++ IL +   G V VVD+ +KL G +T+GDI R   K   LN   V ++M K+P  I +
Sbjct: 18  DSLQILDKGAKGIVIVVDKDKKLIGTVTDGDIRRAILKGISLNECIV-NIMNKSPISIKQ 76

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +T    A +++ ++ I  L +VD+    + ++   D++
Sbjct: 77  ETSREKAKEIIIKNGIKDLPIVDENNTIVDMITINDII 114


>gi|150402972|ref|YP_001330266.1| signal transduction protein [Methanococcus maripaludis C7]
 gi|150034002|gb|ABR66115.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 303

 Score = 40.4 bits (93), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 78/169 (46%), Gaps = 26/169 (15%)

Query: 195 ESRNFSENDFYVLHPG--GKLGTL--FVCASDVMH-------SGDSIPLVKIG------- 236
           ++R FSE D   + P    K+  L   V   D+ H       S  S+P + +G       
Sbjct: 121 DTRKFSEGDVVKVGPTHHNKIVILGRIVGRDDINHILLMDVISVASVPGISVGDVGIKKE 180

Query: 237 ----CP---LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                P   + DA  +L +     + V+D G+KL G+++  D+     K L   +V  +M
Sbjct: 181 LIYITPEKTIRDAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEAVAKGLENENVTKLM 239

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    + ++  +  A+ L+ +HN+  L+++D+ + AIGI+   D+L  
Sbjct: 240 AEKIYTVSKNEKIYDALILMEKHNVGRLIILDNEEYAIGILTRTDILNL 288


>gi|145591177|ref|YP_001153179.1| CBS domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282945|gb|ABP50527.1| CBS domain containing protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 689

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 2/84 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           L +A+ ++++   G + +V  G KL G+++E D+ +   + ++ +  V  VM   P  I 
Sbjct: 589 LKEAVDLMAKNNIGFLPIVS-GGKLVGVLSESDVLKLATRGIDLSAPVATVMNSKPITIG 647

Query: 298 EDTLLTVAMQLLRQHNISVLMVVD 321
           +D  L  A +L+ +HNI  L VVD
Sbjct: 648 KDATLRDAAELMVKHNIRHLPVVD 671


>gi|148654858|ref|YP_001275063.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus sp. RS-1]
 gi|148566968|gb|ABQ89113.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus sp. RS-1]
          Length = 490

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILED 299
           DA+ +++E R   + +      L GI+T  D+   F  D  +  + D+M  +N   + E 
Sbjct: 113 DALDLMAEYRISGIPITTPDGDLIGIVTNRDL--RFETD-RSRPIRDLMTTRNLITVPEG 169

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L  H I  L+VVD   K  G++   D+++
Sbjct: 170 TTLEQAKEILHAHRIEKLLVVDRRGKLSGMITVKDIMK 207


>gi|15615737|ref|NP_244041.1| hypothetical protein BH3175 [Bacillus halodurans C-125]
 gi|10175798|dbj|BAB06894.1| BH3175 [Bacillus halodurans C-125]
          Length = 435

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+DE  K++G++   D+            +E VM KNP  + E T +     ++    I 
Sbjct: 227 VIDENMKIQGMVAAKDVLNASRH----TPIEKVMTKNPITVSERTSVAAVAHVMVWEGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           +L V+D  +K IG+V   D+L+
Sbjct: 283 LLPVIDSHRKLIGVVSRQDVLK 304


>gi|14520560|ref|NP_126035.1| hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
 gi|5457776|emb|CAB49266.1| Hypothetical protein, containing CBS domains [Pyrococcus abyssi
           GE5]
          Length = 282

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSV 285
            +P VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    + +
Sbjct: 69  DVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKTEKYKEVEI 128

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E    ++  ++ + T L  A++ L   N   L VVDD  + IGI+   DLLR
Sbjct: 129 EPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180


>gi|69244149|ref|ZP_00602685.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257878261|ref|ZP_05657914.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257880957|ref|ZP_05660610.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257892521|ref|ZP_05672174.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|258616226|ref|ZP_05713996.1| transcriptional regulator [Enterococcus faecium DO]
 gi|293560609|ref|ZP_06677097.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|294621691|ref|ZP_06700855.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|314942665|ref|ZP_07849493.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133C]
 gi|314992934|ref|ZP_07858332.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133B]
 gi|68196606|gb|EAN11032.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257812489|gb|EEV41247.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257816615|gb|EEV43943.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257828900|gb|EEV55507.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|291598700|gb|EFF29753.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|291605432|gb|EFF34878.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|313592577|gb|EFR71422.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133B]
 gi|313598602|gb|EFR77447.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133C]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|322689782|ref|YP_004209516.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis 157F]
 gi|320461118|dbj|BAJ71738.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 517

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 94/243 (38%), Gaps = 56/243 (23%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL----------- 173
           DEL A   YA     PL  I ++    +    D VL LP E +  P  +           
Sbjct: 6   DELNAQSAYA-----PLPPIFAK----LGLAYDDVLLLPNETDVIPSEVDTSTHLTRKIV 56

Query: 174 --APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVM 224
             AP  SA M       +AIA+  +       RN S +D                  DV+
Sbjct: 57  MKAPVLSAAMDTVTESEMAIAMARNGGIGVLHRNLSIDDQ-------------AAQVDVV 103

Query: 225 HSGDS----IPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +S     PL V     L D   +  +     + VVD+  KL GIIT  D+     +D
Sbjct: 104 KRSESGMITDPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASED 163

Query: 280 LNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +TL V+D M K      P  I +D     A +LL QH +  L +VD+     G++   D
Sbjct: 164 YDTLKVKDDMTKENLVTGPSNISKDD----AHRLLAQHKVEKLPLVDEEGHLTGLITVKD 219

Query: 335 LLR 337
            ++
Sbjct: 220 FVK 222


>gi|262172662|ref|ZP_06040340.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           mimicus MB-451]
 gi|261893738|gb|EEY39724.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           mimicus MB-451]
          Length = 352

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDT 300
           A+ I++ +      VVD+  KL G+IT+GDI R    DL  T +V  VM  NP      T
Sbjct: 19  ALEIINNEALRVAVVVDQNDKLLGMITDGDIRRGLLNDLQLTDAVSKVMNSNPITAKLGT 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                ++L+ +  I  + ++D   K +G+
Sbjct: 79  SKEQLVELMERKQILSVPLLDKENKVVGL 107


>gi|297565548|ref|YP_003684520.1| inosine-5'-monophosphate dehydrogenase [Meiothermus silvanus DSM
           9946]
 gi|296849997|gb|ADH63012.1| inosine-5'-monophosphate dehydrogenase [Meiothermus silvanus DSM
           9946]
          Length = 503

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  ++ E + G + V+D   KL G++T  DI   F   L    V +VM    ++I  
Sbjct: 117 LEDAERLMREYKIGGLPVIDVYGKLMGLVTNRDI--RFEHHLKR-PVSEVMTPLERLITA 173

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A  +LRQH +  L +VD   K  G++   DL++
Sbjct: 174 PPGTTLEEAENILRQHKVEKLPLVDAEGKLKGLLTLKDLVK 214


>gi|121594040|ref|YP_985936.1| CBS domain-containing protein [Acidovorax sp. JS42]
 gi|120606120|gb|ABM41860.1| CBS domain containing protein [Acidovorax sp. JS42]
          Length = 389

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F + L  L   ++M      ++ +T L  A  L+R+H +  L VVD  ++ +GIV   D 
Sbjct: 239 FQRTLGELRCGEIMSSPVHAVVAETPLKDAWALMRKHAVKALPVVDGARRVVGIVTVADF 298

Query: 336 LRF 338
           +R 
Sbjct: 299 MRL 301


>gi|320108351|ref|YP_004183941.1| inosine-5'-monophosphate dehydrogenase [Terriglobus saanensis
           SP1PR4]
 gi|319926872|gb|ADV83947.1| inosine-5'-monophosphate dehydrogenase [Terriglobus saanensis
           SP1PR4]
          Length = 507

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 15/106 (14%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI------K 291
           P+ DA+ ++   +   V V  +G+KL GI+T        ++DL  +S  D+ I      K
Sbjct: 106 PIADALEVMRRYKISGVPVT-QGKKLVGILT--------NRDLRFISQTDIPISEVMTKK 156

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   +   T L  A  +L QH +  L+VV+D  +  G++   D+ +
Sbjct: 157 NLITVPVGTTLEQAEHILHQHRVEKLLVVNDAYELKGLITVKDIQK 202


>gi|331681106|ref|ZP_08381743.1| transcriptional regulator [Escherichia coli H299]
 gi|331081327|gb|EGI52488.1| transcriptional regulator [Escherichia coli H299]
          Length = 274

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALTAKVG 239

Query: 187 DALAIALLESRNFSENDFY 205
             L + LL +   + +D Y
Sbjct: 240 VMLLVELLTTSLIALDDQY 258


>gi|209885591|ref|YP_002289448.1| inosine-5'-monophosphate dehydrogenase [Oligotropha carboxidovorans
           OM5]
 gi|209873787|gb|ACI93583.1| inosine-5'-monophosphate dehydrogenase [Oligotropha carboxidovorans
           OM5]
          Length = 496

 Score = 40.4 bits (93), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++ +  F  + VV  G      KL GI+T  D+   F  D N    E +  +  
Sbjct: 109 LADALAMMKDHGFSGIPVVTGGSNGQPGKLVGILTNRDV--RFATDPNQKVSELMTHEKL 166

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E    T A +LL Q+ I  L+VVDD  + +G++   D+
Sbjct: 167 ITVREGVSQTEAKRLLHQNRIEKLLVVDDQYRCVGLITVKDM 208


>gi|330720725|gb|EGG98953.1| putative transmembrane protein [gamma proteobacterium IMCC2047]
          Length = 286

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 5/118 (4%)

Query: 221 SDVMHS-GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           SD +H   D+ PLV++G    D    L E      + +D  +K    +      R + + 
Sbjct: 80  SDPIHKHKDASPLVRLGLQPADLKGALEEMN----SYLDISEKDLTRVYSLAQQRAYTRK 135

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +  + +M ++   +   T L  A  LLR H I VL V+DD ++ +GIV  +D ++
Sbjct: 136 FGEVRCKHIMSRDVITVAPSTPLEEAWSLLRAHKIKVLPVLDDDRQVVGIVSLVDFVK 193


>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii ATCC 51333]
 gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii ATCC 51333]
          Length = 212

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 14/113 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTL 283
           G  + DAI ++       + V+ +G KL G++++ D+ R    D            L+ L
Sbjct: 17  GATVPDAIELMQAHGITKLPVLHDG-KLCGVVSQLDLNRALPSDATSLSFGEVAYLLSKL 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++   D+L
Sbjct: 76  KIYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLDEG-KVVGVITESDVL 127


>gi|307108660|gb|EFN56900.1| hypothetical protein CHLNCDRAFT_144573 [Chlorella variabilis]
          Length = 184

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +L +L+    D+M +  ++       PL  A     +   G + VVD G KL GII++ D
Sbjct: 47  ELTSLWKHVEDIMQA--NVITTTPDTPLQQARAACKQHGIGGMPVVDRGGKLVGIISKSD 104

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             R         +V D M      +     +  A  L+ Q+++  L VVD   + +GIV 
Sbjct: 105 FRR------GGAAVRDAMTAAVVAVRLRDAIPAAAALMLQNDLDRLPVVDPAGRCVGIVT 158

Query: 332 FLDLL 336
             D+ 
Sbjct: 159 RTDMF 163


>gi|297623612|ref|YP_003705046.1| inosine-5'-monophosphate dehydrogenase [Truepera radiovictrix DSM
           17093]
 gi|297164792|gb|ADI14503.1| inosine-5'-monophosphate dehydrogenase [Truepera radiovictrix DSM
           17093]
          Length = 505

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  ++ E R   V + +   +L GI+T  D+   F  D +   VE +M K+  V + 
Sbjct: 121 LQEAEDLMREYRISGVPITEPDGRLVGILTNRDL--RFETDFSQ-PVEALMTKDDLVTVP 177

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A  +LR+H +  L+VVDD     G++   D+ +
Sbjct: 178 VGTTLEEARDILRRHKVEKLLVVDDAYILKGLITIKDITK 217


>gi|268323851|emb|CBH37439.1| conserved hypothetical protein, DUF39 family and CBS domain pair
           family [uncultured archaeon]
          Length = 509

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 17/165 (10%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK-- 234
           TS +    + + +A AL         +F++  P  +L    VC    M     +P VK  
Sbjct: 330 TSPLSSFYMANKVAEAL--KSEIKGGEFFLTQPVERLPIDTVCKP--MKQTKELPPVKDV 385

Query: 235 ---------IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                        + DA  ++ E +F  + V+ E   L+GI+T  DI          L+ 
Sbjct: 386 MIREVATISESASIADAAKLMMESQFTHIPVISEEGVLEGIVTAWDISTAVATRHEGLA- 444

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            ++M +N      +  L + ++ L ++NIS L V+D  ++ IG++
Sbjct: 445 -EIMTRNVITADSEEPLELVIRKLERYNISALPVIDRDRRVIGMI 488


>gi|227828450|ref|YP_002830230.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831205|ref|YP_002832985.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580094|ref|YP_002838494.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581246|ref|YP_002839645.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|229585679|ref|YP_002844181.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620642|ref|YP_002915468.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284998708|ref|YP_003420476.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457653|gb|ACP36340.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227460246|gb|ACP38932.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228010810|gb|ACP46572.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228011962|gb|ACP47723.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228020729|gb|ACP56136.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381712|gb|ACR42800.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284446604|gb|ADB88106.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323475529|gb|ADX86135.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478244|gb|ADX83482.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 131

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 49/95 (51%), Gaps = 1/95 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILED 299
           DA  I+ ++  G + +VDE  +  GI+TE DI R    ++   S V  +M K    I  +
Sbjct: 22  DAAKIMKKENLGSLIIVDETNRPIGIVTERDILRAVADEILLDSPVSTIMTKGLITIAPN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             +T A+ ++ Q+N+  L VV    + +G++   D
Sbjct: 82  KDITEALIIMYQNNVRHLAVVGQNGELVGVISIRD 116


>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
 gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
           [Desulfococcus oleovorans Hxd3]
          Length = 423

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 28/114 (24%), Positives = 54/114 (47%), Gaps = 14/114 (12%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL----------- 283
           PL +A+ ++  + F  + V D+  +L G+++  DIFR   +   D N             
Sbjct: 217 PLAEAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIFRTVMREAPDWNAFRSQKVDVTHLK 276

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V D+  ++   +  DT +   ++L+  ++I  + VVD     +G++   DLLR
Sbjct: 277 QVADIARRDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENNLLGLISDKDLLR 330



 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 47/120 (39%), Gaps = 20/120 (16%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTL---- 283
           PL +   +L    F  V VVD+  +  G+IT+GD+ R              D + +    
Sbjct: 134 PLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLIRKGGLPLRLGLLAESDQDRMKSVL 193

Query: 284 ------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                   E VM      I ED  L  A+ L+   N   L V D   +  G+V  LD+ R
Sbjct: 194 SQMAGRQAEQVMTGPAVTIAEDRPLAEAVDLMISRNFKRLPVTDKEGRLCGMVSRLDIFR 253


>gi|206895349|ref|YP_002246487.1| inosine-5'-monophosphate dehydrogenase [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737966|gb|ACI17044.1| inosine-5'-monophosphate dehydrogenase [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 485

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ ++       + +  EG KL GIIT  DI   F  D   L +EDVM K   V   
Sbjct: 107 LADALALMEHYHISGIPITVEG-KLVGIITNRDI--RFEDDFTQL-IEDVMTKKNLVTAP 162

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A Q+L+ H I  L +VD+     G++   DL
Sbjct: 163 VGTSLEEARQILKAHKIEKLPLVDEEGYLKGLITIKDL 200


>gi|222111227|ref|YP_002553491.1| cbs domain containing membrane protein [Acidovorax ebreus TPSY]
 gi|221730671|gb|ACM33491.1| CBS domain containing membrane protein [Acidovorax ebreus TPSY]
          Length = 389

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 32/64 (50%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F + L  L   ++M      ++ +T L  A  L+R+H +  L VVD  ++ +GIV   D 
Sbjct: 239 FQRTLGELRCGEIMSSPVHAVVAETPLKDAWALMRKHAVKALPVVDGARRVVGIVTVADF 298

Query: 336 LRFG 339
           +R  
Sbjct: 299 MRLA 302


>gi|297201812|ref|ZP_06919209.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197717527|gb|EDY61561.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 500

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTDPAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGVEAMDLLRKHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|163782022|ref|ZP_02177021.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882554|gb|EDP76059.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 490

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 80/199 (40%), Gaps = 24/199 (12%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P   E  PH +              P  SA M       LAIAL       E  
Sbjct: 15  DDVLLVPDYSEVLPHEVDVSTYITRKIRLNIPIVSAAMDTVTEARLAIALA-----REGG 69

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDE 259
             V+H    +G        V  S   + L    V+    + +A+ I+   +   V VVDE
Sbjct: 70  LGVIHRNMPIGEQAREVEKVKKSESGMILNPVTVRPEASVREALEIMERYKISGVPVVDE 129

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNISVLM 318
            +KL GI+T  D+      D +   V   M K   V  E+ + L  A +LL++  +  L 
Sbjct: 130 EEKLVGILTNRDLRFIKPSDYDK-PVTQFMTKENLVTAEEGIGLDEATELLQKFKVEKLP 188

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           +VD   +  G++   D+++
Sbjct: 189 IVDSEGRIKGLITIKDIVK 207


>gi|161529077|ref|YP_001582903.1| inosine-5'-monophosphate dehydrogenase [Nitrosopumilus maritimus
           SCM1]
 gi|160340378|gb|ABX13465.1| inosine-5'-monophosphate dehydrogenase [Nitrosopumilus maritimus
           SCM1]
          Length = 476

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMIKNPKVILED 299
           DA+    +K    + VVD   KL GI+TE D +F   +  +  +  +DV+   P V L++
Sbjct: 107 DALDYAEDKEISGLLVVDSNSKLVGIVTERDLLFAGSNGTIADVMTKDVVTAKPGVSLDE 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                A  +L +H I  L +VDD     G++   D+
Sbjct: 167 -----AKDILHKHRIEKLPIVDDSGIIQGLITSKDI 197


>gi|52549993|gb|AAU83842.1| hypothetical protein GZ34G5_5 [uncultured archaeon GZfos34G5]
          Length = 134

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            P+ + + IL  K    +AV     +  G+I+E D+ +   KD ++L+ EDVM    + +
Sbjct: 27  TPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDVIKFMDKDWDSLTAEDVMSHFVRAV 86

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLLR 337
             +T L  A   + + NI  L+V+         IGI+   D+LR
Sbjct: 87  DPETTLRKAADTMNELNIHRLLVLSLSPAPGVPIGILSASDILR 130


>gi|90962912|ref|YP_536827.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           UCC118]
 gi|301300524|ref|ZP_07206721.1| SIS domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90822106|gb|ABE00744.1| Transcriptional regulator, RpiR family [Lactobacillus salivarius
           UCC118]
 gi|300851854|gb|EFK79541.1| SIS domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 274

 Score = 40.4 bits (93), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 22/80 (27%), Positives = 40/80 (50%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + G+G SG+   +    L   G  +F    +     D  ++  DD+II +S SG++D
Sbjct: 125 RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIVNSDDVIIAISQSGNTD 184

Query: 126 ELKAILYYARRFSIPLIAIT 145
           ++      A++    +I+IT
Sbjct: 185 DVNVACSLAKQKGTKIISIT 204


>gi|293569886|ref|ZP_06680973.1| transcriptional regulator [Enterococcus faecium E1071]
 gi|291587634|gb|EFF19511.1| transcriptional regulator [Enterococcus faecium E1071]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|289450948|gb|ADC93865.1| mannose-1-phosphate guanyltransferase [Leptospira interrogans
           serovar Canicola]
          Length = 351

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+     L +AI IL ++    V +VDE +KL G +T+GD+ R   ++    +SV +VM 
Sbjct: 8   LINSNLSLQEAIKILDKEALRIVLIVDENKKLLGTLTDGDVRRALMQNKGLAISVNEVMS 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             PKV   +      +  + ++ +  L +VD+    +G+
Sbjct: 68  SKPKVAHANWTKERMLLEMEKYELLHLPIVDEQGILVGL 106


>gi|119470047|ref|ZP_01612852.1| hypothetical protein ATW7_05394 [Alteromonadales bacterium TW-7]
 gi|119446757|gb|EAW28030.1| hypothetical protein ATW7_05394 [Alteromonadales bacterium TW-7]
          Length = 408

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 232 LVKIGCPLIDAITILSE---KRFG-CVAVVDE----GQKLKGIITE-GDIFRNFHK---- 278
           L+KI  P +  +  L+    + FG   A +DE     ++LK ++ E G +    H+    
Sbjct: 120 LLKIMFPFVVVVNWLTNGILRLFGISAAQIDEHSMSKEELKTVVNESGALLPARHQSMLT 179

Query: 279 ---DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              DL  ++VED+MI   +++   + D    ++ QL    +  VL+  D+   A+G +H 
Sbjct: 180 SILDLEQVTVEDIMIPRNEIVAIDINDDWKVISRQLTHAQHTRVLLYRDNIDDAVGFIHS 239

Query: 333 LDLLRF 338
            D LR 
Sbjct: 240 RDALRL 245


>gi|258620128|ref|ZP_05715167.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587486|gb|EEW12196.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 281

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-----TPSFFVHAAEASHGDLGM 108
            CA + +KA   ++ + GIG S  + + +   L   G        + +   +AS     +
Sbjct: 125 QCAQQLLKA--NKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQAS-----L 177

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  DD+++V+S  G++ E+   +  A++    +IA+T   +  VA  AD V+      E 
Sbjct: 178 LKSDDVLLVVSARGNTQEVLTAIERAKQNDAQVIALTRYGRDKVAQLADYVIPYSYTEEH 237

Query: 169 CPHGLAPTTSAIMQLAIGD 187
              G+   T  ++Q+A  D
Sbjct: 238 SQLGM--VTPQLLQMAAFD 254


>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
 gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 153

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKSDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLVGLISIGDLVK 127


>gi|290958079|ref|YP_003489261.1| IMP dehydrogenase/ GMP reductase [Streptomyces scabiei 87.22]
 gi|260647605|emb|CBG70710.1| IMP dehydrogenase/ GMP reductase [Streptomyces scabiei 87.22]
          Length = 500

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D  +KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTDGNKKLLGIVTNRDMA--FETD-RSRQVREVMTPMPLVTGQ 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGADAMELLRRHKIEKLPLVDDAGILKGLITVKDFVK 210


>gi|257884614|ref|ZP_05664267.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,501]
 gi|257820452|gb|EEV47600.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,501]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|255505206|ref|ZP_05344418.3| transcriptional regulator, RpiR family [Bryantella formatexigens
           DSM 14469]
 gi|255269636|gb|EET62841.1| transcriptional regulator, RpiR family [Bryantella formatexigens
           DSM 14469]
          Length = 336

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 95  FVHAAEASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           F+H A+ SH  +    + T  D+I+  S+SG++ +++ I+  A +  IP+I +T   KS 
Sbjct: 214 FIHIAD-SHMQMLSIALATPQDVILFFSYSGATRDMEDIMNIAHKRKIPVILVTHFPKSQ 272

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            A  AD+ L        C +  +P  S  +   +G  L I  L
Sbjct: 273 AAAFADVTLL-------CGYNESPLQSGSIAARMGQMLIIDCL 308


>gi|18314177|ref|NP_560844.1| hypothetical protein PAE3588 [Pyrobaculum aerophilum str. IM2]
 gi|18161767|gb|AAL65026.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score = 40.4 bits (93), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV 295
           LI A  +L+ +  G +AV+D    +K   +++E DI R     +  +  VE  M      
Sbjct: 21  LIQAAEMLAAESIGALAVIDSVTQKKPPAVLSERDIVRAVAMKMPLSTPVEAFMSPGLVT 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I ED  +  A +L+  HNI  L+VV+   + +G+V   D+L+
Sbjct: 81  IEEDEDVRKAAKLMTMHNIRHLVVVNKQGELVGVVSIRDVLK 122


>gi|8778501|gb|AAF79509.1|AC002328_17 F20N2.5 [Arabidopsis thaliana]
          Length = 784

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 4/96 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIK 291
           V  G  L +A  IL E    C+ VVD+   L GI+T GDI R    + +T L V     +
Sbjct: 628 VSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYLSNNASTILDVSSETKQ 687

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            P V       +++++LL+++   V  V   C K I
Sbjct: 688 TPSVSSHLVEPSLSLRLLQENTCPVSSV---CTKKI 720


>gi|71006334|ref|XP_757833.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
 gi|46097269|gb|EAK82502.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
          Length = 708

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 10/114 (8%)

Query: 231 PLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTL 283
           PL  +  P    + DA  + + KR  CV VVDE + L GI T  D+ FR      D    
Sbjct: 67  PLPALTVPQSISVADASQLCAAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGLDARNT 126

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V  +M ++P V  + T  T A+  +       L V   C +   +V  LD+ +
Sbjct: 127 PVSAIMTRSPMVTRDTTSATEALNTMVTRGFRHLPV---CNEDGDVVGLLDIAK 177


>gi|320159155|ref|YP_004191533.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
 gi|319934467|gb|ADV89330.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
          Length = 621

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 17/134 (12%)

Query: 203 DFYVLHPGGKLGTL--FVCASD---------VMHSGDSIPLVKIGCPLID-AITILSEKR 250
           D++      +L +   FVC  +         V  + ++I +V++   + D A+ +  ++R
Sbjct: 128 DYFAAQANLRLSSAVNFVCQKEEKGLFFRTVVEIASENIAIVQVTDSIRDVALAMCGKQR 187

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             C  V+D G  + G++T+ D+  +     KD++   +E VM  NP +I  D  +  A+ 
Sbjct: 188 SSCAVVMD-GNDIVGLVTDRDMTASVVAKEKDVSE-RIESVMTLNPVLIESDAKVIQAIS 245

Query: 308 LLRQHNISVLMVVD 321
           L+ Q+NI  L VV+
Sbjct: 246 LMLQYNIRCLPVVN 259


>gi|302037171|ref|YP_003797493.1| hypothetical protein NIDE1839 [Candidatus Nitrospira defluvii]
 gi|300605235|emb|CBK41568.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 140

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 53/101 (52%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           ++DA T+++E+  G  A++    K+ G+ TE D+        +D   + ++DVM KN   
Sbjct: 22  VLDAATLMAEEFVGS-ALITSSSKITGVFTERDLMMRVVGRKRDPEKVKIKDVMTKNMVT 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +         + L+++H    L+V D+ ++ IGIV   D++
Sbjct: 81  VNPKDTAHYCLNLMKEHRCRHLLVFDN-EEFIGIVSLRDMV 120


>gi|294614510|ref|ZP_06694423.1| transcriptional regulator [Enterococcus faecium E1636]
 gi|291592628|gb|EFF24224.1| transcriptional regulator [Enterococcus faecium E1636]
          Length = 291

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|284163584|ref|YP_003401863.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
 gi|284013239|gb|ADB59190.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
          Length = 393

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDIF 273
           V   D+M     +  V+    + + +  +  +R     V+D    EG++L G++T  D  
Sbjct: 250 VTVGDIMTPAGDLHTVEPETTIAELVQRMFTERHTGYPVIDTDAFEGERLVGLVTLTDAR 309

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                + +  +V++VM  + K I  D+    A++ +R++NI  L+VVDD
Sbjct: 310 EVDPVERDAFTVDEVMSTDLKTITPDSDAMTAIEEMRENNIGRLLVVDD 358


>gi|304391059|ref|ZP_07373011.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|304325942|gb|EFL93188.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 212

 Score = 40.4 bits (93), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 14/113 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTL 283
           G  + DAI ++       + V+ +G KL G++++ D+ R    D            L+ L
Sbjct: 17  GATVPDAIELMQTHGITKLPVLRDG-KLCGVVSQLDLNRALPSDATSLSFGEVAYLLSKL 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++   D+L
Sbjct: 76  KIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDEG-KVVGVITESDVL 127


>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
          Length = 218

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 12/112 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTLSVE 286
           +I A  ++ E +   + VVD+  KL GI++E D+      D            L+ + V+
Sbjct: 20  MIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKAASPSDATSLDMYELTYLLSEMKVK 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M K+P+ I     +  A  ++R   I  L V+D   K +GI+   D+ R 
Sbjct: 80  NIMTKSPRFIRPTDTVERAALIMRDLKIGSLPVIDADGKVLGIITDTDIFRL 131


>gi|254565947|ref|XP_002490084.1| hypothetical protein [Pichia pastoris GS115]
 gi|238029880|emb|CAY67803.1| Hypothetical protein PAS_chr1-1_0425 [Pichia pastoris GS115]
 gi|328350486|emb|CCA36886.1| Meiotically up-regulated gene 70 protein [Pichia pastoris CBS 7435]
          Length = 625

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVMIKNPKVIL 297
           +A  ++  K+  C+ VVDE  +L GI T  D+ FR     L  N+ +V+ +M  +P    
Sbjct: 106 EAAQLMGFKKENCILVVDENDELSGIFTAKDLAFRIVGSGLRANSTTVDAIMTPSPLCCK 165

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             T  + A+ L+       L +VDD  + +GI+
Sbjct: 166 TTTKASEALNLMVTKGFRHLPIVDDTNQIVGIL 198


>gi|148656029|ref|YP_001276234.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568139|gb|ABQ90284.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 133

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVE 286
           L +A  ++ + R   + V+D   +L GI+TEGDI R            N +     L + 
Sbjct: 14  LPEARRLMHKSRIRRLPVLDSAGRLTGIVTEGDINRISASHAHDVREYNLYHRAADLPLR 73

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D M +    +  D  +    QLL  H IS + VV +  + +G++   DL R
Sbjct: 74  DFMTRPVITVGPDEPIIAVAQLLLLHRISGVPVV-EGDRVVGVITESDLFR 123


>gi|86606513|ref|YP_475276.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555055|gb|ABD00013.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
          Length = 903

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V A D+M S   +  ++    + +A  +L       + VVD   +L G+I+  DI    H
Sbjct: 319 VTAKDLMSS--PVRTIRPEVTIQEAQRVLLRYGHSGLVVVDGQGRLVGVISRRDIDIALH 376

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+  M  + K +  DT L    +L+ Q +I  L V+ D Q  +GIV   D+LR
Sbjct: 377 HGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVLQDGQ-LVGIVTRTDVLR 435


>gi|13542206|ref|NP_111894.1| inosine 5'-monophosphate dehydrogenase [Thermoplasma volcanium
           GSS1]
 gi|14325640|dbj|BAB60543.1| IMP dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 485

 Score = 40.4 bits (93), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 5/100 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            P+  A TI+  K    + V+ E +KL GI+T+ D+   F K  +T+S  DVM+KN    
Sbjct: 108 TPIEVARTIMKTKNIAGLPVLKE-EKLVGILTKRDL--EFAKQGSTVS--DVMVKNVITA 162

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            E+  L  A+ +L ++ I  L +VD     +G++   D++
Sbjct: 163 PENVDLEDAINILHKNRIEKLPLVDKDNHLVGLITAKDII 202


>gi|325108779|ref|YP_004269847.1| Cl- channel voltage-gated family protein [Planctomyces brasiliensis
           DSM 5305]
 gi|324969047|gb|ADY59825.1| Cl- channel voltage-gated family protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 633

 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 222 DVMHSGDSIP-LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
           D ++  ++ P ++  G PL   + +++E +     VV +  +L GI +  D+    + + 
Sbjct: 490 DEVYRKNAQPVMIPRGMPLERIVHLVAETQQHYFPVVSDKGRLVGIFSADDVRAYLYNEA 549

Query: 280 LNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA--IGIV 330
           + TL+  EDVM  NP V+  D  L  A++     N+  L VV    K   IG+V
Sbjct: 550 IWTLANAEDVMTANPVVVTPDDNLNTALRYFTSTNLDELPVVSSTDKGRLIGMV 603


>gi|331654503|ref|ZP_08355503.1| transcriptional regulator [Escherichia coli M718]
 gi|323969124|gb|EGB64428.1| SIS domain-containing protein [Escherichia coli TA007]
 gi|331047885|gb|EGI19962.1| transcriptional regulator [Escherichia coli M718]
          Length = 274

 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALTAKVG 239

Query: 187 DALAIALLESRNFSENDFY 205
             L + LL +   + +D Y
Sbjct: 240 VMLLVELLTTSLIALDDQY 258


>gi|255628307|gb|ACU14498.1| unknown [Glycine max]
          Length = 206

 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 241 DAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           DA+  +++   G + VV  D  + + GIITE D  R      +   +  V D+M +  K+
Sbjct: 82  DAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I    DT +  AMQL+  + I  + V+D+ +  IG+V   D++R
Sbjct: 142 ITVTPDTKVLQAMQLMTDNRIRHIPVIDE-KGMIGMVSIGDVVR 184


>gi|150401060|ref|YP_001324826.1| CBS domain-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013763|gb|ABR56214.1| CBS domain containing protein [Methanococcus aeolicus Nankai-3]
          Length = 279

 Score = 40.0 bits (92), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIK 291
           VK    L D +   SEK  G   +VD+  KL  +ITE  I ++  +D+    +VED M K
Sbjct: 95  VKETARLKDVLNTFSEKHIGGAPIVDKDNKLISMITERIILKSLKEDIGEKETVEDYMTK 154

Query: 292 NPKV 295
           NP V
Sbjct: 155 NPVV 158


>gi|271966979|ref|YP_003341175.1| RpiR family transcriptional regulator [Streptosporangium roseum DSM
           43021]
 gi|270510154|gb|ACZ88432.1| putative transcriptional regulator, RpiR family [Streptosporangium
           roseum DSM 43021]
          Length = 299

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 9/182 (4%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           AE   L+   + L  +   +    VE + A + RV + G+G SG + + +A  L   G  
Sbjct: 112 AESEALADTAAQLNPD---RLGAVVEAMTAAR-RVDVYGVGASGLVAADMAQKLMRIGRS 167

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S     A  +     ++   D+ + +S +G + ++ A +  AR+     +AIT+  +S +
Sbjct: 168 SHAFTDAHLALTSAALLGEGDVTVGVSCTGETPDVIAPMRVARKAGATTVAITNNPRSSL 227

Query: 153 ACHAD-IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           A  A+ ++++  +E    P  LA   S I QL I D + + + + R F  +D  +    G
Sbjct: 228 AELAEHVLVSAGRETAFRPGALA---SRISQLLIVDCIFVGIAQ-RTFETSDAALRATRG 283

Query: 212 KL 213
            L
Sbjct: 284 AL 285


>gi|114566449|ref|YP_753603.1| IMP dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337384|gb|ABI68232.1| inosine-5'-monophosphate dehydrogenase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 484

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA+ I+       V +  EG KL GIIT  DI   F  D N   +++VM     V     
Sbjct: 109 DALDIMEHYHISGVPIT-EGSKLVGIITNRDI--RFETDFNQ-PIKNVMTSEGLVTAPVG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T +  AM LLR++ I  L +VDD    +G++   D+
Sbjct: 165 TSMDQAMDLLRKYKIEKLPLVDDSFNLMGLITIKDI 200


>gi|254517706|ref|ZP_05129762.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
 gi|226911455|gb|EEH96656.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
          Length = 281

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 3/88 (3%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN-KSVVACHADIVLTLPKE 165
            ++ + D+ I +S+SG + E+      A++  +P+IAIT  +  + +A  +DIVL +P  
Sbjct: 172 ALMEKGDIAIAISYSGETKEVIKCAENAKKAKVPVIAITKASINNTLADISDIVLQVPFV 231

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++   G    +S I QL+I D L I +
Sbjct: 232 EKTLREG--AMSSRISQLSIIDMLFIGM 257


>gi|126178295|ref|YP_001046260.1| signal-transduction protein [Methanoculleus marisnigri JR1]
 gi|125861089|gb|ABN56278.1| putative signal-transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 150

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVI 296
           P ++   I+ EK  G V VV    +  GI+T+ D+  R   ++ N   V    I    VI
Sbjct: 19  PAVEVAKIMGEKNVGSVVVVTGDNRPTGILTDRDLAVRVMAQEKNPGEVRASEILTRDVI 78

Query: 297 -LEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +D++ +  A+Q +    I  + +VDD  + IGIV   D++R 
Sbjct: 79  TFQDSMGIYEAIQKMTNEGIRRMPIVDDAGRLIGIVTMDDIVRM 122


>gi|119715234|ref|YP_922199.1| CBS domain-containing protein [Nocardioides sp. JS614]
 gi|119535895|gb|ABL80512.1| CBS domain containing protein [Nocardioides sp. JS614]
          Length = 196

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 53/111 (47%), Gaps = 14/111 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------FHKDLNTLSVED 287
           A++ L+E    C+ VVD   +L+G+++E D+ R+                      +VE+
Sbjct: 23  ALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAPDPRAQERPVTIEPVFPPRTVEE 82

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  ++P  +  +  L  A+ ++    +  L VVDD  + +G+V   D+++ 
Sbjct: 83  VYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQV 133


>gi|308172910|ref|YP_003919615.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|307605774|emb|CBI42145.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|328552550|gb|AEB23042.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
 gi|328910950|gb|AEB62546.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 14/102 (13%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNP 293
           +A  ++ +   G + VVD G+ LKG++T+ DI        R+    ++ +    V+  NP
Sbjct: 23  EAAALMHQHNVGAIPVVDGGE-LKGMLTDRDIALRTTAQGRDGQTPVSHVMSSKVVSGNP 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++ LE+     A QL+ QH I  L +VD     +GIV   DL
Sbjct: 82  EMSLEE-----ASQLMAQHQIRRLPIVDQ-NHLVGIVALGDL 117


>gi|302553615|ref|ZP_07305957.1| inosine-5'-monophosphate dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471233|gb|EFL34326.1| inosine-5'-monophosphate dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 500

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D     V DVM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTDPAGKLLGIVTNRDMA--FETDRGR-QVRDVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VD+     G++   D ++
Sbjct: 171 VGISGVDAMELLRRHKIEKLPLVDEAGILKGLITVKDFVK 210


>gi|255526644|ref|ZP_05393550.1| putative signal transduction protein with CBS domains [Clostridium
           carboxidivorans P7]
 gi|296186103|ref|ZP_06854508.1| CBS domain pair [Clostridium carboxidivorans P7]
 gi|255509677|gb|EET86011.1| putative signal transduction protein with CBS domains [Clostridium
           carboxidivorans P7]
 gi|296049371|gb|EFG88800.1| CBS domain pair [Clostridium carboxidivorans P7]
          Length = 128

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 4/103 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
            ++MHS   I  +K    L  A+  ++  +     VVDE  KL GII + DI+R   ++ 
Sbjct: 3   KEIMHS--DIVKLKTEDDLKKALETINANKVNGAPVVDENDKLVGIIVKADIYRFLMEEG 60

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
             +T  V+ VM KN     ED  +      LR+++I  + +VD
Sbjct: 61  HYDTCPVDWVMTKNVVTASEDEDIVEVAARLRENDIIAIPIVD 103


>gi|149195257|ref|ZP_01872346.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus
           TB-2]
 gi|149134599|gb|EDM23086.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus
           TB-2]
          Length = 482

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L  A  I++  +   V VVD   KL GI+T  D+   F KD +   V+DVM K P +  +
Sbjct: 105 LAKAENIMATYKISGVPVVDNSGKLVGILTNRDM--RFEKDYSK-KVKDVMTKMPLITAK 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + L  A Q+L ++ I  L ++D      G++   D+ +
Sbjct: 162 EGITLEEAEQILHKNKIEKLPIIDKNGYLKGLITIKDIQK 201


>gi|49482435|ref|YP_039659.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49485069|ref|YP_042290.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|151220349|ref|YP_001331172.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161508458|ref|YP_001574117.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253315450|ref|ZP_04838663.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253730546|ref|ZP_04864711.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253734755|ref|ZP_04868920.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257424331|ref|ZP_05600760.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427008|ref|ZP_05603410.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429645|ref|ZP_05606032.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432292|ref|ZP_05608655.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435251|ref|ZP_05611302.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M876]
 gi|257793993|ref|ZP_05642972.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|258408599|ref|ZP_05680884.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|258421189|ref|ZP_05684116.1| transcriptional regulator [Staphylococcus aureus A9719]
 gi|258424304|ref|ZP_05687185.1| transcriptional regulator [Staphylococcus aureus A9635]
 gi|258438939|ref|ZP_05690030.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|258444174|ref|ZP_05692508.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|258447053|ref|ZP_05695203.1| transcriptional regulator [Staphylococcus aureus A6300]
 gi|258448511|ref|ZP_05696624.1| transcriptional regulator [Staphylococcus aureus A6224]
 gi|258451630|ref|ZP_05699656.1| transcriptional regulator [Staphylococcus aureus A5948]
 gi|258455744|ref|ZP_05703699.1| transcriptional regulator [Staphylococcus aureus A5937]
 gi|282893349|ref|ZP_06301582.1| transcriptional regulator [Staphylococcus aureus A8117]
 gi|282902783|ref|ZP_06310676.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282907185|ref|ZP_06315033.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282912430|ref|ZP_06320226.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913049|ref|ZP_06320841.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282915521|ref|ZP_06323293.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           D139]
 gi|282921465|ref|ZP_06329183.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           C427]
 gi|282921842|ref|ZP_06329541.1| transcriptional regulator [Staphylococcus aureus A9765]
 gi|282922676|ref|ZP_06330366.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           C101]
 gi|282926300|ref|ZP_06333932.1| transcriptional regulator [Staphylococcus aureus A10102]
 gi|293498103|ref|ZP_06665957.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293511692|ref|ZP_06670386.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|293550302|ref|ZP_06672974.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|294849127|ref|ZP_06789871.1| transcriptional regulator [Staphylococcus aureus A9754]
 gi|295405464|ref|ZP_06815274.1| transcriptional regulator [Staphylococcus aureus A8819]
 gi|297209302|ref|ZP_06925701.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244801|ref|ZP_06928681.1| transcriptional regulator [Staphylococcus aureus A8796]
 gi|297589060|ref|ZP_06947701.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|300911301|ref|ZP_07128750.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380156|ref|ZP_07362876.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|49240564|emb|CAG39221.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49243512|emb|CAG41936.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|150373149|dbj|BAF66409.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus str. Newman]
 gi|160367267|gb|ABX28238.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253725686|gb|EES94415.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253727234|gb|EES95963.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257273349|gb|EEV05451.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276639|gb|EEV08090.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257280126|gb|EEV10713.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283171|gb|EEV13303.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285847|gb|EEV15963.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M876]
 gi|257787965|gb|EEV26305.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|257840608|gb|EEV65067.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|257842613|gb|EEV67035.1| transcriptional regulator [Staphylococcus aureus A9719]
 gi|257845570|gb|EEV69603.1| transcriptional regulator [Staphylococcus aureus A9635]
 gi|257847815|gb|EEV71811.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|257850433|gb|EEV74381.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|257854066|gb|EEV77019.1| transcriptional regulator [Staphylococcus aureus A6300]
 gi|257858142|gb|EEV81030.1| transcriptional regulator [Staphylococcus aureus A6224]
 gi|257860678|gb|EEV83500.1| transcriptional regulator [Staphylococcus aureus A5948]
 gi|257861956|gb|EEV84729.1| transcriptional regulator [Staphylococcus aureus A5937]
 gi|282314897|gb|EFB45283.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           C101]
 gi|282315880|gb|EFB46264.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           C427]
 gi|282320624|gb|EFB50962.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           D139]
 gi|282323149|gb|EFB53468.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282324126|gb|EFB54442.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282330084|gb|EFB59605.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591629|gb|EFB96700.1| transcriptional regulator [Staphylococcus aureus A10102]
 gi|282593896|gb|EFB98886.1| transcriptional regulator [Staphylococcus aureus A9765]
 gi|282597242|gb|EFC02201.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282764035|gb|EFC04162.1| transcriptional regulator [Staphylococcus aureus A8117]
 gi|290919349|gb|EFD96425.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291097034|gb|EFE27292.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291465650|gb|EFF08182.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|294824019|gb|EFG40444.1| transcriptional regulator [Staphylococcus aureus A9754]
 gi|294969539|gb|EFG45558.1| transcriptional regulator [Staphylococcus aureus A8819]
 gi|296886235|gb|EFH25169.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178318|gb|EFH37565.1| transcriptional regulator [Staphylococcus aureus A8796]
 gi|297577571|gb|EFH96284.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|300887480|gb|EFK82676.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304341137|gb|EFM07056.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312436696|gb|ADQ75767.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|315194649|gb|EFU25038.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|320141516|gb|EFW33357.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320142266|gb|EFW34081.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|323440171|gb|EGA97885.1| RpiR family transcriptional regulator [Staphylococcus aureus O11]
          Length = 292

 Score = 40.0 bits (92), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 16/178 (8%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R  +++       +  Q     + +K  +  + + G G S  
Sbjct: 88  LIENESVETLKNKMIA--RATNTMRFVATNIMDAQIDAICDVLKNART-IFLFGFGASSL 144

Query: 78  IGSKLASTLASTGTPSFFVHAAE------ASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
               L   L+  G     +H         A+H D       D +I ++  GS  EL++I 
Sbjct: 145 TIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDD------RDCMIFVTNQGSHSELQSIA 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L   +  E+    +A TTS   QL   D L
Sbjct: 199 QVATHYSIPIITISSTANNPVAQIADYALIYGRTDEN-EMRMAATTSLFAQLFTVDIL 255


>gi|313639389|gb|EFS04266.1| SIS domain-containing protein [Listeria seeligeri FSL S4-171]
          Length = 67

 Score = 40.0 bits (92), Expect = 0.47,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 36/61 (59%), Gaps = 4/61 (6%)

Query: 156 ADIV--LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
           ADI   +++ KEP+  P  +  T S +  +A  DA+ + L+   N+++  F V+HPGG +
Sbjct: 3   ADIFFPVSVAKEPD--PFNMLATASTMTVIASFDAIIVCLMTYMNYTKEQFSVIHPGGAV 60

Query: 214 G 214
           G
Sbjct: 61  G 61


>gi|257061543|ref|YP_003139431.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8802]
 gi|256591709|gb|ACV02596.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8802]
          Length = 903

 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 48/90 (53%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVDE   L GII+  D+    H   +   V+  M ++ K+I  +TLL     
Sbjct: 347 RYGHSGLSVVDENDILVGIISRRDLDLALHHGFSHAPVKGYMTRHLKIITPETLLPEIES 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  ++I  L VV +  K +GIV   DLLR
Sbjct: 407 IMVTYDIGRLPVV-EGDKLLGIVTRTDLLR 435


>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MEX-5]
 gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MEX-5]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLIGLISIGDLVK 127


>gi|110005244|emb|CAK99570.1| hypothetical transcriptional regulator with helix-turn-helix domain
           transcription regulator protein [Spiroplasma citri]
          Length = 283

 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 48/212 (22%), Positives = 82/212 (38%), Gaps = 33/212 (15%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIK-----------AIKGRVVITGIGKSGHIGSKL 82
           E   L  + ++++   S+  H  ++ I             +K R+   GIG S      L
Sbjct: 83  ETMNLKDIANNMRVYYSYSIHETIDNIDLEVLDRLINDIVLKKRIFAFGIGASFLACRVL 142

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            S L   G   +      +    L     DDLII+ S SG ++E+  I+  A + +I  +
Sbjct: 143 HSNLNMIGYNCYTTENIHSLMVTLSNAEADDLIIIFSKSGKTNEVVNIINLANKLNID-V 201

Query: 143 AITSENKSVVAC----HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A+ + N ++       H  +     KE E  P      +S I+Q+ I D +  +LL+   
Sbjct: 202 ALVTNNPNIDELYKIKHKILFEVHTKENERFP----ALSSKIVQILISDIIFRSLLK--- 254

Query: 199 FSENDFYVLHPG--GKLGTLFVCASDVMHSGD 228
                   +HP    K+        D   SG+
Sbjct: 255 --------IHPNLENKIKAANAITEDYNQSGN 278


>gi|329765254|ref|ZP_08256834.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
 gi|329138160|gb|EGG42416.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
          Length = 576

 Score = 40.0 bits (92), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL--SVEDVMIKNPKVIL 297
           +A TIL +K    + VVD+     GI+T+ DI     + L N L  ++ D+M+     I 
Sbjct: 10  EACTILKKKDVDEIIVVDDSYNPIGIVTDEDILTKLSESLVNPLKTTLGDIMVFPVITIG 69

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ED  L+ A++++R+  I  + V+      +GI++
Sbjct: 70  EDHFLSEALEIMREKKIRKIAVLSKSNLVVGILY 103


>gi|332158854|ref|YP_004424133.1| hypothetical protein PNA2_1213 [Pyrococcus sp. NA2]
 gi|331034317|gb|AEC52129.1| hypothetical protein PNA2_1213 [Pyrococcus sp. NA2]
          Length = 392

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 15/110 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---------------TLSVE 286
           A+ ++ +     + +VDE  KL+G++T  D+   F K                  ++ + 
Sbjct: 152 ALAVMRDHGISRIPIVDEEGKLEGLVTLHDLILRFIKPRFRAQAGELVGEKIPPFSMKLR 211

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + MI+    IL D  +  A+  ++ +NI  L+VVD+  K +GI+   DLL
Sbjct: 212 EAMIRGVITILPDASVREAVATMKDNNIDGLVVVDENNKVVGILTVKDLL 261


>gi|330469770|ref|YP_004407513.1| RpiR family transcriptional regulator [Verrucosispora maris
           AB-18-032]
 gi|328812741|gb|AEB46913.1| transcriptional regulator, rpir family protein [Verrucosispora
           maris AB-18-032]
          Length = 289

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 9/137 (6%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDDLIIVLSWS 121
           GR+VI G+G SG +   L   L   G  +F    VH A  S     ++ R D+ + +S +
Sbjct: 132 GRIVIFGVGASGFVALDLQQKLHRIGRAAFCFPDVHTALTS---AALLARGDVAVGVSHT 188

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ ++  +L  A   +   +A+T+  +S +A  AD VLT      +   G     S I 
Sbjct: 189 GATSDVIEVLAQAGSRAATTVALTNFPRSPLATLADHVLTTAARETTYRSGA--MASRIA 246

Query: 182 QLAIGDALAIALLESRN 198
           QL + D L +  + +RN
Sbjct: 247 QLTVVDCLYVG-VAARN 262


>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
          Length = 234

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 20/126 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V+ G    + + +L+E+      VVDE +++ G+++E D+                    
Sbjct: 17  VREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPQERRILPDRH 76

Query: 274 -RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R            D+M   P  I  D  +  A +L+    +  L VV+D  + +GIV  
Sbjct: 77  RREARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTR 136

Query: 333 LDLLRF 338
            DLL+ 
Sbjct: 137 GDLLKV 142


>gi|229172959|ref|ZP_04300511.1| RpiR family transcriptional regulator [Bacillus cereus MM3]
 gi|228610479|gb|EEK67749.1| RpiR family transcriptional regulator [Bacillus cereus MM3]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLTKEAVVIAISHSGSNKGLLEALEVAKARGAHIIAITSYQKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|156938201|ref|YP_001435997.1| hypothetical protein [Ignicoccus hospitalis KIN4/I]
 gi|156567185|gb|ABU82590.1| CBS domain containing protein [Ignicoccus hospitalis KIN4/I]
          Length = 127

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 6/107 (5%)

Query: 235 IGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVM 289
           + CP    L + +  +     G V +++ G +L GI TE D+ R F +       V D M
Sbjct: 12  VWCPPNSTLKEVVHKMRAHNVGSVLILN-GDELVGIFTERDLVRAFDEGAKPEDLVSDFM 70

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +NP V+  +  L  A+Q +  H I  L VV    + +G+V   D++
Sbjct: 71  TRNPIVVNPEESLESALQKMLAHGIRHLPVVSPEGRVLGVVSLRDVV 117


>gi|154175518|ref|YP_001407770.1| inosine 5'-monophosphate dehydrogenase [Campylobacter curvus
           525.92]
 gi|112802503|gb|EAT99847.1| inosine-5'-monophosphate dehydrogenase [Campylobacter curvus
           525.92]
          Length = 482

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A++++S+     V VVDE  KL GI+T  D+   F  D + L V+D M K P +   + 
Sbjct: 107 EALSLMSDLHISGVPVVDEEHKLIGILTNRDL--RFETDKSVL-VKDRMTKAPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++  Q+ +  L +VD+  K  G++   DL +
Sbjct: 164 CTLDDAEKIFSQNRVEKLPIVDENGKLDGLITIKDLKK 201


>gi|47565619|ref|ZP_00236659.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
 gi|47557255|gb|EAL15583.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS+  L   L  AR     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSKNSVVIGISHSGSNKGLLEALEIARARGAKIIAITSYQKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|332158026|ref|YP_004423305.1| hypothetical protein PNA2_0384 [Pyrococcus sp. NA2]
 gi|331033489|gb|AEC51301.1| hypothetical protein PNA2_0384 [Pyrococcus sp. NA2]
          Length = 282

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 9/115 (7%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------HKDLNT 282
            +P +K    L  A  ++ E  +  + VVDE  +  GI+T GDI R +      +KD+  
Sbjct: 69  DVPTIKGNDDLRKAARLMLEHDYRRIIVVDEENRPIGILTVGDIIRRYFAKTEKYKDV-- 126

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++E    +   ++ + T L VA++ L   N   L VVDD    +GIV   DLLR
Sbjct: 127 -TIEPYYQRYVSIVWKGTPLKVALKALLLSNAMALPVVDDNGNLVGIVDETDLLR 180


>gi|296104237|ref|YP_003614383.1| putative DNA-binding transcriptional regulator [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058696|gb|ADF63434.1| putative DNA-binding transcriptional regulator [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 282

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++A + R+++TGIG SG +       L   G  + 
Sbjct: 104 KENVAAMHATLDVNTEEKLLESVAMLRAAR-RIILTGIGASGLVARNFGWKLTKIGYNAI 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  DDL++ +S++G   E+      A R    ++AIT    + +  
Sbjct: 163 VEQDMHALLATVQAMDPDDLLLAISYTGERREINMATDEALRVGGKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++       +TSA  Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATRSAAISSTSA--QMMLTDLLFMALVQQ 262


>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
 gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
          Length = 234

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 51/126 (40%), Gaps = 20/126 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V+ G    + + +L+E+      VVDE +++ G+++E D+                    
Sbjct: 17  VREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPRERRILPDRH 76

Query: 274 -RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R            D+M   P  I  D  +  A +L+    +  L VV+D  + +GIV  
Sbjct: 77  RREARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTR 136

Query: 333 LDLLRF 338
            DLL+ 
Sbjct: 137 GDLLKV 142


>gi|299822763|ref|ZP_07054649.1| CBS domain protein [Listeria grayi DSM 20601]
 gi|299816292|gb|EFI83530.1| CBS domain protein [Listeria grayi DSM 20601]
          Length = 433

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VV++  +L G+IT  DI      D N T S+E VM KNP  + E   +  A  ++    I
Sbjct: 227 VVNKAMRLVGMITSKDIL-----DKNMTASIERVMTKNPLTVGEKMSVASAAHMMIWEGI 281

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            V+ VV D    +GIV   D+L+
Sbjct: 282 EVIPVVKDDLTLVGIVSRQDILK 304


>gi|229029981|ref|ZP_04186047.1| RpiR family transcriptional regulator [Bacillus cereus AH1271]
 gi|228731329|gb|EEL82245.1| RpiR family transcriptional regulator [Bacillus cereus AH1271]
          Length = 284

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLTKEAVVIAISHSGSNKGLLEALEVAKARGAHIIAITSYQKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|15678875|ref|NP_275992.1| inosine-5'-monophosphate dehydrogenase related protein VIII
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2621947|gb|AAB85353.1| inosine-5'-monophosphate dehydrogenase related protein VIII
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 514

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D    + +     + VVD    L+GI+T  DI     +    L   D+M +   V  E
Sbjct: 406 LKDVARKMVDNNINHIPVVDSEGVLRGIVTSWDIADAVARGKRKL--RDIMTRKVVVARE 463

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  + V  + + ++NIS L +VDD  +  GIV   D+ R 
Sbjct: 464 NEPVDVVARRIDKYNISGLPIVDDENRVKGIVTAEDISRL 503


>gi|15673115|ref|NP_267289.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|281491628|ref|YP_003353608.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           lactis KF147]
 gi|12724094|gb|AAK05231.1|AE006345_11 transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|281375346|gb|ADA64859.1| Transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406680|gb|ADZ63751.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis CV56]
          Length = 283

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 38/147 (25%), Positives = 62/147 (42%), Gaps = 3/147 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AV  I A +  + + GIG S  +   +    +  G    F+  A      L +  +  + 
Sbjct: 123 AVSSIDAAEN-IFVFGIGASSMVAQDIFQKFSRIGKQVIFIQDAHLFVSSLSVSNKKTIF 181

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S  G + E+  +    +   IP+IAITS   S +   AD +L      E      A 
Sbjct: 182 IGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILH-SVSGEDYQMRTAA 240

Query: 176 TTSAIMQLAIGDALAIALLESRNFSEN 202
           T S + QL + D L   +  S +F+E+
Sbjct: 241 TMSLMAQLYVVDIL-FYMYVSEHFTES 266


>gi|81428231|ref|YP_395231.1| putative glycine/betaine/carnitine/choline ABC transporter,
           ATP-binding subunit [Lactobacillus sakei subsp. sakei
           23K]
 gi|78609873|emb|CAI54920.1| Putative glycine/betaine/carnitine/choline ABC transporter,
           ATP-binding subunit [Lactobacillus sakei subsp. sakei
           23K]
          Length = 383

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 16/94 (17%)

Query: 254 VAVVDEGQKLKGIITEGDIFR----NFHKDL-----------NTLSVEDVMIKNPKVILE 298
           +A++D G K+    T  +I R    +F KDL           N  +V  +M+K P  I  
Sbjct: 209 IAIMD-GGKIIQYGTPNEILRQPANDFVKDLIGHDRLLEAKPNVETVGQIMLKTPVTITP 267

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           D  L+ A++L+RQ  +  L+VVDD Q   G+V  
Sbjct: 268 DQSLSSAIKLMRQRRVDTLLVVDDQQLLQGLVDL 301


>gi|15923183|ref|NP_370717.1| RpiR family transcription regulator [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15925897|ref|NP_373430.1| hypothetical protein SA0187 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21281896|ref|NP_644982.1| hypothetical protein MW0167 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|57651195|ref|YP_185078.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus COL]
 gi|87160090|ref|YP_492909.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88193971|ref|YP_498758.1| hypothetical protein SAOUHSC_00160 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148266618|ref|YP_001245561.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392657|ref|YP_001315332.1| RpiR family transcripitonal regulator [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978523|ref|YP_001440782.1| hypothetical protein SAHV_0192 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|221140738|ref|ZP_03565231.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|255004990|ref|ZP_05143591.2| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|262048282|ref|ZP_06021168.1| hypothetical protein SAD30_1703 [Staphylococcus aureus D30]
 gi|262051074|ref|ZP_06023299.1| hypothetical protein SA930_0655 [Staphylococcus aureus 930918-3]
 gi|269201844|ref|YP_003281113.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|284023207|ref|ZP_06377605.1| transcriptional regulator [Staphylococcus aureus subsp. aureus 132]
 gi|295426738|ref|ZP_06819377.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|296274956|ref|ZP_06857463.1| transcriptional regulator [Staphylococcus aureus subsp. aureus MR1]
 gi|13700109|dbj|BAB41408.1| SA0187 [Staphylococcus aureus subsp. aureus N315]
 gi|14245960|dbj|BAB56355.1| similar to transcription regulator RpiR family [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21203331|dbj|BAB94032.1| MW0167 [Staphylococcus aureus subsp. aureus MW2]
 gi|57285381|gb|AAW37475.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus COL]
 gi|87126064|gb|ABD20578.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|87201529|gb|ABD29339.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147739687|gb|ABQ47985.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945109|gb|ABR51045.1| helix-turn-helix protein RpiR [Staphylococcus aureus subsp. aureus
           JH1]
 gi|156720658|dbj|BAF77075.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|259160977|gb|EEW45996.1| hypothetical protein SA930_0655 [Staphylococcus aureus 930918-3]
 gi|259163592|gb|EEW48148.1| hypothetical protein SAD30_1703 [Staphylococcus aureus D30]
 gi|262074134|gb|ACY10107.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|269939719|emb|CBI48087.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TW20]
 gi|283469438|emb|CAQ48649.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ST398]
 gi|285815918|gb|ADC36405.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           04-02981]
 gi|295129190|gb|EFG58817.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|298693456|gb|ADI96678.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus ED133]
 gi|302331938|gb|ADL22131.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302750072|gb|ADL64249.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|312828717|emb|CBX33559.1| helix-turn-helix domain, rpiR family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315130168|gb|EFT86156.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315198374|gb|EFU28704.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|329312891|gb|AEB87304.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus T0131]
 gi|329725810|gb|EGG62289.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329731844|gb|EGG68204.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329732381|gb|EGG68731.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 291

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 75/178 (42%), Gaps = 16/178 (8%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R  +++       +  Q     + +K  +  + + G G S  
Sbjct: 87  LIENESVETLKNKMIA--RATNTMRFVATNIMDAQIDAICDVLKNART-IFLFGFGASSL 143

Query: 78  IGSKLASTLASTGTPSFFVHAAE------ASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
               L   L+  G     +H         A+H D       D +I ++  GS  EL++I 
Sbjct: 144 TIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDD------RDCMIFVTNQGSHSELQSIA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L   +  E+    +A TTS   QL   D L
Sbjct: 198 QVATHYSIPIITISSTANNPVAQIADYALIYGRTDEN-EMRMAATTSLFAQLFTVDIL 254


>gi|295398156|ref|ZP_06808205.1| inosine-5'-monophosphate dehydrogenase [Aerococcus viridans ATCC
           11563]
 gi|294973675|gb|EFG49453.1| inosine-5'-monophosphate dehydrogenase [Aerococcus viridans ATCC
           11563]
          Length = 496

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 8/101 (7%)

Query: 241 DAITILSEKRFGCVAVV--DEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVIL 297
           +A+ ++   R   V ++  +E  KL GI+T  DI F   H      ++E+VM K+  V+ 
Sbjct: 115 EAVALMGRYRISGVPIINNEEDHKLLGILTNRDIRFLENHDQ----AIENVMTKDDLVVA 170

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + T L  A  +L ++ I  L++VDD  +  G+V   D+ R
Sbjct: 171 PQGTSLEEASHILYENRIEKLLLVDDQGRLTGLVTIKDIER 211


>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 174

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL--SVEDVMIKNPKVILED 299
           + IL +KR G V V D+   L+GI++E DI R        TL  SV+D+M +  +    D
Sbjct: 59  VQILKDKRIGAVVVTDQNGALQGILSERDIVRRMADTPGQTLPQSVQDLMTREVRTCTPD 118

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LL   ++ + +     + V+ D     G++   D+++F
Sbjct: 119 DLLIEVVKTMTEGRFRHMPVLRDGH-LCGVITIGDVVQF 156


>gi|257866236|ref|ZP_05645889.1| IMP dehydrogenase [Enterococcus casseliflavus EC30]
 gi|257873250|ref|ZP_05652903.1| IMP dehydrogenase [Enterococcus casseliflavus EC10]
 gi|257875871|ref|ZP_05655524.1| IMP dehydrogenase [Enterococcus casseliflavus EC20]
 gi|325567664|ref|ZP_08144331.1| inosine-5'-monophosphate dehydrogenase [Enterococcus casseliflavus
           ATCC 12755]
 gi|257800194|gb|EEV29222.1| IMP dehydrogenase [Enterococcus casseliflavus EC30]
 gi|257807414|gb|EEV36236.1| IMP dehydrogenase [Enterococcus casseliflavus EC10]
 gi|257810037|gb|EEV38857.1| IMP dehydrogenase [Enterococcus casseliflavus EC20]
 gi|325159097|gb|EGC71243.1| inosine-5'-monophosphate dehydrogenase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 494

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D  T+ + DVM K+  +   
Sbjct: 112 DAEHLMSKYRISGVPIVETMENRKLVGIITNRDM--RFVTDY-TMPINDVMTKDQLITAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A ++L+QH I  L +VD+     G++   D+ +
Sbjct: 169 VGTSLKDAEKILQQHKIEKLPIVDEAGILSGLITIKDIEK 208


>gi|239630199|ref|ZP_04673230.1| CBS domain containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239527811|gb|EEQ66812.1| CBS domain containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 207

 Score = 40.0 bits (92), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDC 323
            P VI    DT +  A +LL +HN+  L VV + 
Sbjct: 150 MPNVITVTADTSIIAASKLLLKHNVDSLPVVQNV 183


>gi|161528286|ref|YP_001582112.1| signal transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160339587|gb|ABX12674.1| putative signal transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 140

 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 58/101 (57%), Gaps = 5/101 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL 297
           DA +IL EK    + ++ + +K  G+I+E DI +      +  +++ +ED+M K  + + 
Sbjct: 23  DAASILKEKEISFLVII-KDEKPIGVISERDIVQKVTAEDQKASSVLIEDIMSKKFRWVS 81

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DT +  A+Q +  +NI  L++++D +K +G++   +L  F
Sbjct: 82  PDTPIEDAVQKMLNNNIRRLIILED-EKLVGVITQTNLAEF 121


>gi|260905404|ref|ZP_05913726.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium linens BL2]
          Length = 508

 Score = 40.0 bits (92), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 17/203 (8%)

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S+     D VL LP + +  P   + TT    ++ +   L  A +++   S     +   
Sbjct: 16  SLTGLTYDDVLLLPGDTDVIPSDASTTTRLTKEIELNIPLVSAAMDTVTESRMAIAMARI 75

Query: 210 GGKLGTLF--VCASDVMHSGDSIPLVKIGCPLIDAITILSEK------------RFGCVA 255
           GG LG +   +   D     D +   + G  + D +TI  EK            R   + 
Sbjct: 76  GG-LGIIHRNLSMEDQAAQVDYVKRSESGM-INDPLTITPEKTLEELDEICGKYRISGLP 133

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNI 314
           VVDE   L GI+T  D+      +  T +V D M + P +   D +    A +LL +H +
Sbjct: 134 VVDENNVLLGIVTNRDLRFVTRSEFPTRTVADTMTRMPLITAPDGVSPEKAFELLAEHKV 193

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VD+     G++   D ++
Sbjct: 194 EKLPLVDENNVIKGLITVKDFVK 216


>gi|167623308|ref|YP_001673602.1| inosine 5'-monophosphate dehydrogenase [Shewanella halifaxensis
           HAW-EB4]
 gi|167353330|gb|ABZ75943.1| inosine-5'-monophosphate dehydrogenase [Shewanella halifaxensis
           HAW-EB4]
          Length = 490

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 6/98 (6%)

Query: 243 ITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI--LED 299
           + +L+EK  F    VV+E  +L GIIT  D+   F  D  + +V+ VM    +++  LE 
Sbjct: 109 LKLLTEKNGFAGYPVVNEANELVGIITGRDV--RFITDW-SRTVDQVMTPKERLVTVLEG 165

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L    +L+  H +  ++VVDD  K  G++   D  +
Sbjct: 166 TKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQK 203


>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
 gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia MC0-3]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKIVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLVGLISIGDLVK 127


>gi|18313646|ref|NP_560313.1| hypothetical protein PAE2866a [Pyrobaculum aerophilum str. IM2]
 gi|18161195|gb|AAL64495.1| conserved protein with CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 147

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 9/116 (7%)

Query: 228 DSIP--LVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           D+ P  L+ IG    L +A+ ++ +   G + VV EG KL G+++E D+ R   +  DLN
Sbjct: 32  DAAPRELITIGPEKTLKEAVDLMVKYNIGFLPVV-EGGKLLGVLSESDVMRLVAQGVDLN 90

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  +   M   P  + + + L  A +L+ +HNI  L V++D  K + ++   D+++
Sbjct: 91  T-PISVYMNTKPITVSKQSTLREAAELMVKHNIRHLPVIEDG-KVVAVLSVKDIVK 144


>gi|300865327|ref|ZP_07110138.1| Phosphoesterase, RecJ-like protein [Oscillatoria sp. PCC 6506]
 gi|300336630|emb|CBN55288.1| Phosphoesterase, RecJ-like protein [Oscillatoria sp. PCC 6506]
          Length = 827

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVD+  +L GIIT  DI    H   +   V+  M    K I  DT+L     
Sbjct: 206 RYGHSGLSVVDDRDRLVGIITRRDIDIALHHGFSHAPVKGYMTPQLKTIAPDTVLPEIES 265

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  ++I  L V+++ Q  +GIV   D+LR
Sbjct: 266 LMVTYDIGRLPVLENGQ-LVGIVTRTDVLR 294


>gi|194098734|ref|YP_002001796.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999033|ref|ZP_04718957.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae 35/02]
 gi|240014059|ref|ZP_04720972.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae DGI18]
 gi|240016494|ref|ZP_04723034.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA6140]
 gi|240080619|ref|ZP_04725162.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA19]
 gi|240113016|ref|ZP_04727506.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|240115773|ref|ZP_04729835.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID18]
 gi|240118068|ref|ZP_04732130.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|240121623|ref|ZP_04734585.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID24-1]
 gi|240123621|ref|ZP_04736577.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID332]
 gi|240125805|ref|ZP_04738691.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128325|ref|ZP_04740986.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291043710|ref|ZP_06569426.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|293399002|ref|ZP_06643167.1| RpiR-family transcriptional regulator [Neisseria gonorrhoeae F62]
 gi|193934024|gb|ACF29848.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae NCCP11945]
 gi|291012173|gb|EFE04162.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|291610416|gb|EFF39526.1| RpiR-family transcriptional regulator [Neisseria gonorrhoeae F62]
 gi|317164326|gb|ADV07867.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 294

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  +++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 113 AAAALLGERRFLK--ESELENGIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 161

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++  D+++ +S +GSS EL   +  A+   
Sbjct: 162 FRFGMSTVAYVDTHTQLMAAS--------VLSDQDVLVAISNTGSSIELLDAVSIAKENG 213

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 214 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 265


>gi|189353150|ref|YP_001948777.1| CBS domain-containing membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337172|dbj|BAG46241.1| CBS domain-containing membrane protein [Burkholderia multivorans
           ATCC 17616]
          Length = 389

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 234 MQAYARTFGQLTCADLMTKNAISIAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTR 293

Query: 333 LDLLR 337
            DL R
Sbjct: 294 ADLTR 298


>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera sp. 301]
 gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
           [Methylotenera sp. 301]
          Length = 143

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+ DA+ +L+E + G + V+D G KL G+ +E D  R      K   T  + +VM  N  
Sbjct: 24  PVFDALVVLAEYKIGALVVLD-GDKLVGVFSERDYAREIILKGKSSKTTPISEVMSSNVL 82

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +  +  AM ++   +I  L V+ +  K IG++   DL++  I
Sbjct: 83  TVKPNDTVEQAMNIMSDKHIRHLPVL-EGNKVIGMLSIGDLVKETI 127


>gi|257877469|ref|ZP_05657122.1| sugar isomerase [Enterococcus casseliflavus EC20]
 gi|257811635|gb|EEV40455.1| sugar isomerase [Enterococcus casseliflavus EC20]
          Length = 189

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 20/143 (13%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG--MITRDDLIIVLSWSGS 123
           RV   G+G+   I   +A   A  G  +  V       G++    IT+DDL+IV S SG 
Sbjct: 42  RVFFIGVGRVLLILEAIAKRWAHLGIDTVIV-------GEITEPAITKDDLLIVGSGSGE 94

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP------KEPESCPHGLAPTT 177
           S    AI   A+ F   +  I +   S ++ +AD  + +P      KE E+    + P T
Sbjct: 95  SLIPLAITKKAKSFEAKIAHIGANGNSSISQYADFFIQIPVQTKFTKENETA--SVQPMT 152

Query: 178 SAIMQ--LAIGDALAIALLESRN 198
           S   Q  L +GD L++ ++ +RN
Sbjct: 153 SLFEQVLLILGDTLSLLII-NRN 174


>gi|196040016|ref|ZP_03107319.1| SIS domain protein [Bacillus cereus NVH0597-99]
 gi|196029275|gb|EDX67879.1| SIS domain protein [Bacillus cereus NVH0597-99]
          Length = 176

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 12/142 (8%)

Query: 58  EKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRD 112
           + +KA++   R+   G G SG I +        TG       A   SH  +   G+++++
Sbjct: 17  QAVKALQEANRIEFYGNGGSGIIATDAYHKFMRTGISCI---AHTDSHFQIMGAGLLSKN 73

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPH 171
            ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E E    
Sbjct: 74  SVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLADITLYTSTRETEFRTE 133

Query: 172 GLAPTTSAIMQLAIGDALAIAL 193
               ++S + QL++ D L + L
Sbjct: 134 ---ASSSRLAQLSLIDTLYVGL 152


>gi|16331172|ref|NP_441900.1| chloride channel protein [Synechocystis sp. PCC 6803]
 gi|1653666|dbj|BAA18578.1| chloride channel protein [Synechocystis sp. PCC 6803]
          Length = 899

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 23/81 (28%), Positives = 46/81 (56%), Gaps = 1/81 (1%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V +G KL G+ T+ D+  N  ++   ++++ +M  NP  +  +  L+  + LL ++ +S 
Sbjct: 489 VVQGGKLVGVFTQTDL-ANAAQESVHIALKQIMTPNPITVDPEAPLSDVLYLLNRYQLSR 547

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV+   K +GI+   D++R
Sbjct: 548 LPVVEGDNKLVGIITRTDIIR 568


>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
 gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria AMMD]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VV EG  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDFVYDAIKLMAEKGIGALLVV-EGDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLIGLISIGDLVK 127


>gi|328948980|ref|YP_004366317.1| IMP dehydrogenase [Treponema succinifaciens DSM 2489]
 gi|328449304|gb|AEB15020.1| IMP dehydrogenase [Treponema succinifaciens DSM 2489]
          Length = 502

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 74/174 (42%), Gaps = 24/174 (13%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SA+MQ    D +AIAL +    S        EN   ++         FV +   +  
Sbjct: 55  PLVSAVMQSVSDDKMAIALAKEGGISFIFGSQTIENQAAMVARVKSYKAGFVTSDSNIRP 114

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTL 283
             ++  V         ++++ +     +AV D+G    KL+GIITE D FR  H   N+ 
Sbjct: 115 DQTLEEV---------VSLIEQTGHSTIAVTDDGTAHGKLEGIITERD-FRIDHVPANS- 163

Query: 284 SVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V + M    K++   +   L+ A  L+  H ++ L ++DD    + IV   D 
Sbjct: 164 KVNEYMTPFAKLVTGKDGITLSAANDLIWAHKVNQLPIIDDKNHLVSIVFRKDF 217


>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
           DSM 74]
 gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
           linguale DSM 74]
          Length = 145

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 60/132 (45%), Gaps = 23/132 (17%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G ++  L+  +SD                ++D + +++EK  G + VVD G+ L GI +E
Sbjct: 9   GKRINALYSVSSD--------------QTVLDGLKVMAEKNIGALLVVDNGE-LTGIFSE 53

Query: 270 GD-----IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            D     I ++ H D     + DVM  N   I  D  L   M ++   +I  L VVD  +
Sbjct: 54  RDYARKVILKDRHSD--DTRIADVMTANVITIGPDQSLEEGMVIMSDRHIRHLPVVDKGE 111

Query: 325 KAIGIVHFLDLL 336
             IGI+   D++
Sbjct: 112 -LIGIISINDIV 122


>gi|188533148|ref|YP_001906945.1| putative DNA-binding transcriptional regulator [Erwinia
           tasmaniensis Et1/99]
 gi|188028190|emb|CAO96048.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
          Length = 279

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+ G+G SG +    +  L   G  +       A    +  +   D+++ +S++G   
Sbjct: 131 RIVLIGVGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALNTGDVLLAISYTGERR 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      ARR    ++A T    + +   A+  L    E ++       +T+A  QLA+
Sbjct: 191 EINLAAQEARRIGATVLAFTGFTPNTLQQSANYCLYTVAEEQTTRSAAISSTTA--QLAL 248

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 249 TDLLFMALIQ 258


>gi|170751951|ref|YP_001758211.1| CBS domain-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170658473|gb|ACB27528.1| CBS domain containing membrane protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 392

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 34/64 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +    ++   +M ++   +  D  L+ AM+LLR+H I  L V D+  + +GIV  
Sbjct: 222 MRVYGRRSGPITCAAIMSRDVIAVAPDAPLSEAMRLLRRHRIKALPVTDEGARVLGIVTQ 281

Query: 333 LDLL 336
            DLL
Sbjct: 282 TDLL 285


>gi|59713533|ref|YP_206308.1| cyclic nucleotide binding protein/CBS domain-containing proteins
           [Vibrio fischeri ES114]
 gi|59481781|gb|AAW87420.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio fischeri
           ES114]
          Length = 619

 Score = 40.0 bits (92), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 46/86 (53%), Gaps = 12/86 (13%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFR-------NFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
            C  +VDE + L G+IT+ D+ +       N H  ++++  +++       + ED L+  
Sbjct: 186 SCAFIVDENKHLIGMITDKDMTKRVVAQAKNVHDPISSIMTQEI-----HTVYEDDLVMS 240

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIV 330
           A+QL+ +HNI  + V++  ++  G +
Sbjct: 241 AVQLMMKHNIQNIPVLNHQKQVTGFI 266


>gi|258405759|ref|YP_003198501.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257797986|gb|ACV68923.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 597

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 5/123 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--- 274
           +C  DVM    S+P + I   L   +    +  F    V  E  KL G+++  D+ +   
Sbjct: 455 LCVCDVMRR--SVPRLPITATLGAIVAATEQTAFPHFVVEQEQNKLAGVLSLRDLRKALL 512

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F  + + LS  D+M +N   +  +  +  A+ L  +++ S+  VVD     +GI+   D
Sbjct: 513 QFEANKDHLSAGDLMSRNVITVERNDSVEKALHLFEEYHYSMFPVVDQDNTVVGILTKDD 572

Query: 335 LLR 337
           +L+
Sbjct: 573 VLK 575


>gi|150400602|ref|YP_001324368.1| CBS domain-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013305|gb|ABR55756.1| CBS domain containing protein [Methanococcus aeolicus Nankai-3]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 56/110 (50%), Gaps = 15/110 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIK----- 291
           +I A  IL + +  C+ +VD  +K+ GIIT  DI  N   D  T+   V DVM K     
Sbjct: 26  VIKAFEILLKHKISCLPIVDADKKIMGIITTTDIGYNLIIDKYTIDTKVSDVMTKKVISV 85

Query: 292 NPKVILEDTLLTVAMQL----LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    E+T+L    ++      +  I+ L VV++  K +GI+   D++R
Sbjct: 86  NP----ENTILDAINKMDEFGYSKEIINQLPVVEEDNKLVGIISDGDIIR 131


>gi|319891540|ref|YP_004148415.1| 6-phospho-3-hexuloisomerase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161236|gb|ADV04779.1| 6-phospho-3-hexuloisomerase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 182

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 9/129 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +R ++   S +  +   QF   V   +A    V +TG G+SG + +  A  L   G  + 
Sbjct: 11  RREIAQTLSQVDDQAIAQFEQVVSDAEA----VFVTGKGRSGFVANGFAMRLNQLGKKAH 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V  A         I + D++IV+S SGS+  LK +   A      +  +T+   S +  
Sbjct: 67  VVGEATTPS-----IQKGDVLIVISGSGSTTHLKLLADKAHEVGATIALVTTATDSKIGE 121

Query: 155 HADIVLTLP 163
            A++ L LP
Sbjct: 122 LANVTLILP 130


>gi|294498144|ref|YP_003561844.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
 gi|295703495|ref|YP_003596570.1| CBS domain-containing protein [Bacillus megaterium DSM 319]
 gi|294348081|gb|ADE68410.1| CBS domain protein [Bacillus megaterium QM B1551]
 gi|294801154|gb|ADF38220.1| CBS domain protein [Bacillus megaterium DSM 319]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 4/95 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E   G + +VD  Q L G+IT+ D+       K  N+  V DVM +    I  +  + 
Sbjct: 28  MKEWNVGAIPIVDRDQ-LVGMITDRDLVIKGIAEKKPNSSKVTDVMSEELITITAEASVE 86

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            A +L+ QH I  L VV++ QK +GIV   DL  F
Sbjct: 87  EASKLMAQHQIRRLPVVEN-QKLVGIVSLGDLSTF 120


>gi|262039230|ref|ZP_06012548.1| transcription regulator [Leptotrichia goodfellowii F0264]
 gi|261746724|gb|EEY34245.1| transcription regulator [Leptotrichia goodfellowii F0264]
          Length = 275

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G SG +  +L +     G        +     +  + T  D+II +S SGS++
Sbjct: 126 RLFLYGVGASGIVARELQNKFLRFGKAGIAYTDSHFQIMNAAITTNKDVIIAVSLSGSTN 185

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A++    +IAIT+   S VA  AD VL L    E+   G     + I QL +
Sbjct: 186 DIVESLEIAKKNKAKIIAITNHILSPVAQLADYVL-LTAGRETLLDG-GSLIAKISQLYV 243

Query: 186 GDAL 189
            D L
Sbjct: 244 ADIL 247


>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
 gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
           sp. 383]
          Length = 153

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDGG-KLVGLISIGDLVK 127


>gi|16330751|ref|NP_441479.1| polyA polymerase [Synechocystis sp. PCC 6803]
 gi|1653244|dbj|BAA18159.1| polyA polymerase [Synechocystis sp. PCC 6803]
          Length = 942

 Score = 40.0 bits (92), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   + VV++ +KL GII+  D+    H   +   V+  M +N K I  DT L     
Sbjct: 357 RYGHSGLTVVNQEEKLVGIISRRDLDLALHHGFSHAPVKGYMTRNVKTIAPDTPLPRIEA 416

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++   ++  L V+D  +K +GIV   D+LR
Sbjct: 417 IMVADDVGRLPVMDQ-EKLVGIVTRTDVLR 445


>gi|327311248|ref|YP_004338145.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947727|gb|AEA12833.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 142

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLK--GIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           DA  IL E   G + +VD   + K  G+++E DI R   + ++ +  V D+  ++   + 
Sbjct: 22  DAAKILREHNIGLLVLVDREDRSKVVGVVSERDIVRAVAEGVDPSRPVLDIATRSVISVE 81

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D  L  A +L+R+HNI  ++V+ D  K  G++   DL+
Sbjct: 82  ADDPLNKAAELMRRHNIRHVVVLKDG-KLYGVLSIRDLV 119


>gi|227518152|ref|ZP_03948201.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX0104]
 gi|227074395|gb|EEI12358.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX0104]
          Length = 420

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S  R   V +V+  E +KL GIIT  D+   F  D   + +E+VM K+  V   
Sbjct: 39  DAEELMSRYRISGVPIVETMENRKLVGIITNRDM--RFVTDYQ-IKIEEVMTKDHLVTAP 95

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 96  VGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDI 133


>gi|168177082|pdb|2QH1|A Chain A, Structure Of Ta289, A Cbs-Rubredoxin-Like Protein, In Its
           Fe+2-Bound State
 gi|168177083|pdb|2QH1|B Chain B, Structure Of Ta289, A Cbs-Rubredoxin-Like Protein, In Its
           Fe+2-Bound State
          Length = 198

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G +F+    +M+S  +   V     + DA+ I++E     + V D+     G+++E  I 
Sbjct: 19  GHMFMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSII 76

Query: 274 RNF---HKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + F   +K  + + +  VM K  PKV  +  +  VA   L ++ +    VVDD  + +GI
Sbjct: 77  KRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVA-AYLSENGLERCAVVDDPGRVVGI 135

Query: 330 VHFLDLLRF 338
           V   DL R+
Sbjct: 136 VTLTDLSRY 144


>gi|163796293|ref|ZP_02190254.1| putative phosphosugar isomerase [alpha proteobacterium BAL199]
 gi|159178435|gb|EDP62977.1| putative phosphosugar isomerase [alpha proteobacterium BAL199]
          Length = 288

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 52  QFHCAVEKIKAIKG-RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
           QF  AV+   A++  R+ + GIG SG +   LA  L   G  +  +        D  +  
Sbjct: 124 QFRMAVDH--ALRADRIAVFGIGPSGAMAGYLAMQLGRFGIDTMTLSDTGLLLADRLLNL 181

Query: 111 RD-DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           R  DL++V+++S    EL+A+L  A    +P I +T      +A   ++VL +P+
Sbjct: 182 RKGDLLVVMAYSRVYPELRALLDRADALGLPKILVTDTLGPELAGRVELVLDIPR 236


>gi|21227420|ref|NP_633342.1| hypothetical protein MM_1318 [Methanosarcina mazei Go1]
 gi|20905786|gb|AAM31014.1| conserved protein [Methanosarcina mazei Go1]
          Length = 364

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D I  + EK+     VV+ G  LKGI+T  DI R    D   + V D+M ++   +  D 
Sbjct: 263 DLIQFMFEKKHMGYPVVESGN-LKGIVTFTDIQRVPTIDRPVMRVSDIMTRDIISVPSDA 321

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  ++L+   NI  ++V+D+    +G++   DL+R
Sbjct: 322 QASDVLKLVTSKNIGRVLVIDNGS-LVGVLSRTDLVR 357


>gi|73542360|ref|YP_296880.1| CBS:HPP [Ralstonia eutropha JMP134]
 gi|72119773|gb|AAZ62036.1| CBS:HPP [Ralstonia eutropha JMP134]
          Length = 379

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           V    P  +A  +L+  R   + VVDE +KL GIIT+ D F   R+        +V D+M
Sbjct: 260 VNPSQPASEASHLLTRHRIKALPVVDEHRKLLGIITQSDFFAAQRDTGARRLAGTVRDLM 319

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +       D  +    Q      +    V+DD  + +G+V   DL+
Sbjct: 320 TRAVVTARADQPMVELAQAFSDGGLHHAPVIDDHHRVVGMVTQSDLV 366


>gi|15669432|ref|NP_248242.1| hypothetical protein MJ_1247 [Methanocaldococcus jannaschii DSM
           2661]
 gi|7388486|sp|Q58644|PHI_METJA RecName: Full=3-hexulose-6-phosphate isomerase; AltName:
           Full=6-phospho-3-hexuloisomerase; Short=PHI
 gi|1591880|gb|AAB99251.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 180

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ I G+G+SG+IG   A  L   G  S+FV        +     +DDL+I++S SG ++
Sbjct: 42  KIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYE-----KDDLLILISGSGRTE 96

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +  +   A+  +  +IAI  E  +VV   AD  LT+P E +   +    TT     L  
Sbjct: 97  SVLTVAKKAKNINNNIIAIVCECGNVVE-FAD--LTIPLEVKKSKYLPMGTTFEETALIF 153

Query: 186 GDALAIALLESRNFSENDFYVLH 208
            D +   +++  N  E++    H
Sbjct: 154 LDLVIAEIMKRLNLDESEIIKRH 176


>gi|116512082|ref|YP_809298.1| transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
 gi|116107736|gb|ABJ72876.1| Transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
          Length = 273

 Score = 40.0 bits (92), Expect = 0.53,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSWSGS 123
           + I G+G SG+    L +     G P   V A   SH  L    ++ + DLII +S SG 
Sbjct: 125 IYIFGVGLSGNTAKDLEAMFLRIGVP---VKAISGSHFQLQTAALLKKTDLIIGISLSGK 181

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           + EL   +  A+     +I ITS + S +A  +DI L    E 
Sbjct: 182 TLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEE 224


>gi|290559654|gb|EFD92981.1| CBS domain containing protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 361

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
            I I+ +   G + V+DE QK+ GI+++ DI +    D   ++  V+D+ IK   ++  D
Sbjct: 82  TIDIMQDSGIGALPVLDEDQKVVGIVSDFDILKVLINDRVFDSFKVDDIAIKKFPILRTD 141

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             L  A +L   + I  L +VD+  K I 
Sbjct: 142 DTLGRAQKLASINKIDNLPIVDNFGKLIA 170



 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIK 291
           V +  P+  A+ I+  K+   + VV + +K  G++     +    K++N+ S V + M K
Sbjct: 14  VDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMVP---YYYILTKEINSKSKVNEFMQK 69

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P V+  D + +  + +++   I  L V+D+ QK +GIV   D+L+
Sbjct: 70  TPGVMPRDDI-SKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILK 114


>gi|290558906|gb|EFD92295.1| inosine-5 -monophosphate dehydrogenase [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 361

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
            I I+ +   G + V+DE QK+ GI+++ DI +    D   ++  V+D+ IK   ++  D
Sbjct: 82  TIDIMQDSGIGALPVLDEDQKVVGIVSDFDILKVLINDRVFDSFKVDDIAIKKFPILRTD 141

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             L  A +L   + I  L +VD+  K I 
Sbjct: 142 DTLGRAQKLASINKIDNLPIVDNFGKLIA 170



 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIK 291
           V +  P+  A+ I+  K+   + VV + +K  G++     +    K++N+ S V + M K
Sbjct: 14  VDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMVP---YYYILTKEINSKSKVNEFMQK 69

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P V+  D + +  + +++   I  L V+D+ QK +GIV   D+L+
Sbjct: 70  TPGVMPRDDI-SKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILK 114


>gi|254413385|ref|ZP_05027156.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
 gi|196180005|gb|EDX74998.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
          Length = 501

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 56/111 (50%), Gaps = 14/111 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKV--I 296
           + I  L+E +   V VV E ++L GI TE D  R   + L+   LS++ VM  +P    I
Sbjct: 32  EVINRLNEHQSSYVLVVQE-KRLVGIFTERDFVRIAAQQLSLENLSIQSVMTPDPITVSI 90

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---------IVHFLDLLRF 338
            +D  +   + LLRQH+I  L V+D   + IG         +V   DLL+F
Sbjct: 91  DQDQGIFSILYLLRQHHIRHLPVIDKGGEIIGVITPKTIREVVQPTDLLKF 141


>gi|39997108|ref|NP_953059.1| CBS domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39983998|gb|AAR35386.1| CBS domain protein [Geobacter sulfurreducens PCA]
 gi|298506121|gb|ADI84844.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
          Length = 144

 Score = 40.0 bits (92), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FR----------NFHKDLNTLSVE 286
           +I+A+ ++ EK    + V+D+ + + GI+TE  +  FR            H  L+  SV 
Sbjct: 21  VIEAVHLMKEKSIRRLPVMDK-ETIVGILTEKMVADFRPSKATSLDTWEVHYILSKTSVT 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M   P  +  DT LT A QLL    ++ ++VVDD  + +GI+   + L 
Sbjct: 80  EAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVTNALE 130


>gi|238809625|dbj|BAH69415.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 297

 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-------LGMITRDDLIIVLS 119
           + I G G S  I   L S L   G P         +H D       L  +T +D++IV S
Sbjct: 145 IYIHGCGSSQRISMNLVSNLLKIGKPVI-------AHSDFHIFFPSLAHVTENDVVIVYS 197

Query: 120 WSGSSDELKAILYYARRFSIPLIAITS--ENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            +  + E   ++  A++   P+I +TS  E   ++A    + L   K   S    L P++
Sbjct: 198 NNLQTMEAHFVIEQAKKQKAPIIVLTSSQEEDKLIA----VKLRYHKIQSST--MLVPSS 251

Query: 178 SAIMQLAIGDALAIALLE 195
           S I Q+ I D L  A+LE
Sbjct: 252 SKIAQMLITDLLFEAVLE 269


>gi|126667589|ref|ZP_01738559.1| CBS domain protein [Marinobacter sp. ELB17]
 gi|126628015|gb|EAZ98642.1| CBS domain protein [Marinobacter sp. ELB17]
          Length = 638

 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKV 295
           P+  A+  + E   G + + D+ +   GI T  D+     ++   LS  +  VM  NP  
Sbjct: 190 PVRKAVARMHENSVGSIVITDDNRHPVGIFTLRDLRTLIAEEKAPLSASIRQVMTPNPCS 249

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +L       A  L+ +H+ + + VVDD  + IG+V   DL 
Sbjct: 250 LLAKENAFAAAMLMAEHHFAHICVVDDENRLIGVVSERDLF 290


>gi|269955495|ref|YP_003325284.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304176|gb|ACZ29726.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 501

 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 1/94 (1%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LT 303
           +  E R     VVD G +L GI+T  D+      +  T +V DVM   P +    T+   
Sbjct: 116 LAGEYRISGFPVVDAGGRLIGIVTNRDLRFTPVAEWATTTVADVMTPAPLITGPSTISRE 175

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A  LLR+H +  L +VD   +  G++   D ++
Sbjct: 176 EATLLLRKHKLERLPLVDADGRLAGLITVKDFVK 209


>gi|118467449|ref|YP_885981.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
 gi|118168736|gb|ABK69632.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
          Length = 513

 Score = 40.0 bits (92), Expect = 0.55,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+  +L GIIT  D+   F  D  +  V +VM K P +  ++ +    A+ L
Sbjct: 137 RISGLPVVDDTGELVGIITNRDM--RFEVD-QSKPVSEVMTKAPLITAKEGVSAEAALGL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 194 LRRHKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|327310841|ref|YP_004337738.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947320|gb|AEA12426.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 139

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILE- 298
           D + +++E   G V +VD   +  GI+TE D+ R   +      +V  +      V    
Sbjct: 23  DVVRLMAENNIGSVVLVDGAGRPVGIVTERDVVRGLARGAGLQDAVRSIATMGDLVTARA 82

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  + VA++ +R   I  L+VVDD    +G++   DLL
Sbjct: 83  DEDIYVALRKMRGRGIRHLVVVDDSGVLVGVISVRDLL 120


>gi|289192998|ref|YP_003458939.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 194

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 5/97 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSV--EDVMIKNPKVILEDT 300
            I++E   G V +V E  K  GI+TE DI  R   K+L    V  E+VM K    I ++ 
Sbjct: 31  NIMTENNIGAVVIV-ENNKPIGIVTERDIVKRVVSKNLKPKDVLAEEVMSKKIITIPQNA 89

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +T A +++  H +  L VV D +  +GIV   D++R
Sbjct: 90  SITEAAKIMATHGVKRLPVVKDGE-LVGIVTQSDIVR 125


>gi|262277408|ref|ZP_06055201.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HIMB114]
 gi|262224511|gb|EEY74970.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HIMB114]
          Length = 486

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I+ EK    + VV+   K+ GIIT  D+   F ++ +   V+D+M KN   I +      
Sbjct: 110 IIKEKHISGIPVVNSQNKILGIITNRDL--RFSRN-DKAKVKDLMTKNVITIRQGYSSNE 166

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A +LL +H I  L+V +   + +G++   D+ +
Sbjct: 167 AKKLLHKHRIEKLIVTNSQNQCLGLITVKDIEK 199


>gi|224003561|ref|XP_002291452.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973228|gb|EED91559.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
           CCMP1335]
          Length = 279

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 3/105 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           ++  + +L+ KR     + DE   L GIIT+ DI R     H   ++  V D M  NP  
Sbjct: 1   VLSVVQLLTNKRGDAAIITDERGGLAGIITDTDITRRVVAKHLSPSSTCVSDAMTSNPTC 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +      T A+  + ++    L V DD    +G++     L   I
Sbjct: 61  VAMSDPATEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAI 105



 Score = 39.3 bits (90), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 3/91 (3%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN--TLSVEDVMIKNPKVILED 299
           + +L+ KR     + D    + GIIT+ D+ R    K+L+  T S+ DVM  NP  +   
Sbjct: 189 VQLLANKRGDAAIITDNNGGMAGIITDTDVTRRVVAKNLSPSTTSISDVMTANPTCVSMS 248

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              T A+  + ++    L V DD    +G++
Sbjct: 249 DPATEALVTMVENRFRHLPVTDDNGAVVGVL 279


>gi|315229849|ref|YP_004070285.1| hypothetical protein TERMP_00084 [Thermococcus barophilus MP]
 gi|315182877|gb|ADT83062.1| hypothetical protein TERMP_00084 [Thermococcus barophilus MP]
          Length = 282

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSV 285
            +P+VK    L  A+ ++ +  +  V VV++  K+ GI+T GDI R +   ++    + +
Sbjct: 70  DVPVVKPTDDLKKAVRLMLDYDYRRVIVVNDDGKVVGILTVGDIIRRYLAKNEKYRNVEI 129

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E    +N  V+ + T L  A++ L   N   + V+DD    +GIV   DLL+
Sbjct: 130 EPYYQRNVSVVWKGTPLKAALKALLLCNAMAIPVIDDDGNLVGIVDETDLLK 181


>gi|258509347|ref|YP_003172098.1| CBS domain-containing protein [Lactobacillus rhamnosus GG]
 gi|257149274|emb|CAR88247.1| CBS domain protein [Lactobacillus rhamnosus GG]
 gi|259650627|dbj|BAI42789.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 185

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 15/130 (11%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSI---PLVKIGCP---------LIDAITILSEKRFGC 253
           +L    K+G  +  AS +    D++   P+ KI  P         + +A+T L     G 
Sbjct: 29  ILDARPKVGYAYQGASVLSADNDALFNTPIAKILLPPTEIKLTTSMEEAVTKLFLADVGS 88

Query: 254 VAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNPKV--ILEDTLLTVAMQLLR 310
           + V+D+   L G+I+  D+ R +F     TL    VM + P V  +  DT +  A +LL 
Sbjct: 89  LYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTRMPNVVTVTADTTIMAASKLLL 148

Query: 311 QHNISVLMVV 320
           +HN+  L V+
Sbjct: 149 KHNVDSLPVI 158


>gi|258510031|ref|YP_003183465.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476757|gb|ACV57076.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 494

 Score = 40.0 bits (92), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           PL DA  ++S+ R   V +V+ G QKL GIIT  D+   F +D ++  + +VM +   + 
Sbjct: 110 PLRDAEALMSKYRISGVPIVECGSQKLIGIITNRDL--RFERD-DSRPIGEVMTRENLIT 166

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L++H I  L +VD      G++   D+
Sbjct: 167 APVGTTLAEAKEILQRHKIEKLPLVDAEGNLRGLITIKDI 206


>gi|238021587|ref|ZP_04602013.1| hypothetical protein GCWU000324_01487 [Kingella oralis ATCC 51147]
 gi|237866201|gb|EEP67243.1| hypothetical protein GCWU000324_01487 [Kingella oralis ATCC 51147]
          Length = 283

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL--GMITRDDLIIVLSWSGS 123
           R+   G+G SG +           G  +    A   +H  L   ++T  D+++V+S SGS
Sbjct: 134 RIEFYGVGNSGIVAQDAQHKFFRFGVSTV---AYSDTHIQLMAAVLTAQDVLVVISNSGS 190

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           S EL   +  A+     +I IT    S +A  AD  L L  + ++  H  +P  S  +QL
Sbjct: 191 SIELLDAVSIAKENGAKVIVITRAG-SPLAQFADCELALAAQEDA--HRYSPMVSRSLQL 247

Query: 184 AIGDALAIAL 193
           A+ D LAI L
Sbjct: 248 AVIDILAIGL 257


>gi|126175186|ref|YP_001051335.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS155]
 gi|153001512|ref|YP_001367193.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS185]
 gi|160876248|ref|YP_001555564.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS195]
 gi|125998391|gb|ABN62466.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS155]
 gi|151366130|gb|ABS09130.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS185]
 gi|160861770|gb|ABX50304.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS195]
 gi|315268437|gb|ADT95290.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS678]
          Length = 488

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++   E T L    +L
Sbjct: 118 FAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTVAEGTKLDEVQKL 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  H I  ++VVDD  K  G++   D 
Sbjct: 175 MHSHRIEKVLVVDDNYKLKGLITVKDF 201


>gi|95931324|ref|ZP_01314039.1| Polynucleotide adenylyltransferase region [Desulfuromonas
           acetoxidans DSM 684]
 gi|95132625|gb|EAT14309.1| Polynucleotide adenylyltransferase region [Desulfuromonas
           acetoxidans DSM 684]
          Length = 880

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 41/82 (50%), Gaps = 1/82 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +V EG +LKG IT   + R  H  L+T +V D M      +  DT L+   QL+ +    
Sbjct: 343 LVVEGAELKGYITRQTVERAIHHGLSTSAVRDYMSTEFGRVAPDTELSQVQQLIVEQRQR 402

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            + VV D    +G++   DLLR
Sbjct: 403 FVPVV-DGHAVVGVITRADLLR 423


>gi|296877221|ref|ZP_06901261.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Streptococcus parasanguinis ATCC 15912]
 gi|296431741|gb|EFH17548.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Streptococcus parasanguinis ATCC 15912]
          Length = 602

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 60  IKAIK--GRVVITGIGKSGHIGSKLASTLAS-TGTPSFFVHAAEASHGDLGMITRDDLII 116
           IKA++   R+ I   G S H G      L   T TP     ++E  +G + ++++  L I
Sbjct: 284 IKAVQEADRIYILAAGTSYHAGFASKKMLEELTDTPVELGISSEWGYG-MPLLSKKPLFI 342

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S SG + + + +L  A    IP + +T+   S ++  AD+ + L   PE     +A T
Sbjct: 343 FISQSGETADSRQVLVKANEMGIPSLTVTNVPGSTLSREADMTMLLHAGPEIA---VAST 399

Query: 177 TSAIMQLAIGDALAIALLESR-NFSENDFYVLH 208
            +   Q+A    LA A+ E+  N     F ++H
Sbjct: 400 KAYTAQIAALAFLAKAVGEANGNEKAKAFDLVH 432


>gi|289774120|ref|ZP_06533498.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289704319|gb|EFD71748.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 222

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMIK 291
            P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM  
Sbjct: 21  TPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMSS 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR 
Sbjct: 81  PAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLRV 127


>gi|257889539|ref|ZP_05669192.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257825899|gb|EEV52525.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
          Length = 291

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  I +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLTSEDCAIFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYLLNTLFSVIYSQNFEEN 269


>gi|124485813|ref|YP_001030429.1| hexulose-6-phosphate isomerase [Methanocorpusculum labreanum Z]
 gi|124363354|gb|ABN07162.1| hexulose-6-phosphate isomerase [Methanocorpusculum labreanum Z]
          Length = 200

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 30/164 (18%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFV-HAAEASHGDLGMITRDDLIIVLSWSGSS 124
           R+ + G G+SG +    A  L  TG  ++ V      + GD       DLII  S SG++
Sbjct: 42  RIYVMGAGRSGLVAKSFAMRLMHTGFTAYVVGETITPAIGDT------DLIIAFSGSGNT 95

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP--KEPESC------------- 169
             +  I   A+     +  ++S  KS +   AD ++ +   ++P +C             
Sbjct: 96  KTIGDIAETAKGLGAKVALVSSNPKSRIGNIADFIIEIETQRDPVTCDAHEYEIRQMLGE 155

Query: 170 -----PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
                P G    TS++M    GDA+   L++ +   E D    H
Sbjct: 156 HRSFAPLGTIFETSSLM---FGDAVISTLMDMKKIEEADLKRRH 196


>gi|53803128|ref|YP_115138.1| hexulose-6-phosphate synthase/SIS domain-containing protein
           [Methylococcus capsulatus str. Bath]
 gi|53756889|gb|AAU91180.1| putative hexulose-6-phosphate synthase/SIS domain protein
           [Methylococcus capsulatus str. Bath]
          Length = 389

 Score = 40.0 bits (92), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 9/99 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL--GMITRDDLIIVLSWSGS 123
           R+ + G G+SG +G   A  L   G  ++ V       G++    I + DL+IV+S SG 
Sbjct: 246 RIFVAGAGRSGLVGRFFAMRLMHGGYQAYIV-------GEIVTPSIRQGDLLIVISGSGE 298

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           ++ + A    A+     +  IT+ +KS +   AD+V  +
Sbjct: 299 TETMIAYAKKAKEQGASIALITTRDKSTIGDMADVVFRI 337


>gi|240167838|ref|ZP_04746497.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium kansasii
           ATCC 12478]
          Length = 532

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D     V +VM K P +  ++ +  + A+ L
Sbjct: 156 RISGLPVVDDDGALVGIITNRDM--RFEVDQGK-QVAEVMTKAPLITAQEGVSASAALGL 212

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L VVD   +  G++   D ++
Sbjct: 213 LRRHKIEKLPVVDGRGRLTGLITVKDFVK 241


>gi|261400287|ref|ZP_05986412.1| transcriptional regulator HexR [Neisseria lactamica ATCC 23970]
 gi|313668241|ref|YP_004048525.1| transcriptional regulator [Neisseria lactamica ST-640]
 gi|269210097|gb|EEZ76552.1| transcriptional regulator HexR [Neisseria lactamica ATCC 23970]
 gi|309380015|emb|CBX21426.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005703|emb|CBN87157.1| putative transcriptional regulator [Neisseria lactamica 020-06]
          Length = 282

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 48/175 (27%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  +++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAAALLGERRFLK--ESELENGIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        ++T  D+++ +S +GSS EL   +  A+   
Sbjct: 150 FRFGISTVAYVDTHTQLMAAS--------VLTGRDVLVAISNTGSSIELLDAVSIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|126459004|ref|YP_001055282.1| CBS domain-containing protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248725|gb|ABO07816.1| CBS domain containing protein [Pyrobaculum calidifontis JCM 11548]
          Length = 688

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 55/99 (55%), Gaps = 2/99 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +AI ++++   G + VV++G KL G+++E DI +   K ++           P V+ +
Sbjct: 589 LKEAIDLMAKYNIGFLPVVEDG-KLVGVLSETDIVKAVAKGVDLGRPVAEFANKPIVVDK 647

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L  A +L+ ++NI  + +V+D  K +G++   D+L+
Sbjct: 648 SATLRDAAELMVKYNIRHIPIVEDG-KVVGVISVRDVLK 685


>gi|20150408|pdb|1JEO|A Chain A, Crystal Structure Of The Hypothetical Protein Mj1247 From
           Methanococcus Jannaschii At 2.0 A Resolution Infers A
           Molecular Function Of 3-Hexulose-6-Phosphate Isomerase
          Length = 180

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 8/143 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ I G+G+SG+IG   A  L   G  S+FV        +     +DDL+I++S SG ++
Sbjct: 42  KIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTPSYE-----KDDLLILISGSGRTE 96

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +  +   A+  +  +IAI  E  +VV   AD  LT+P E +   +    TT     L  
Sbjct: 97  SVLTVAKKAKNINNNIIAIVXEXGNVVE-FAD--LTIPLEVKKSKYLPMGTTFEETALIF 153

Query: 186 GDALAIALLESRNFSENDFYVLH 208
            D +   +++  N  E++    H
Sbjct: 154 LDLVIAEIMKRLNLDESEIIKRH 176


>gi|219122133|ref|XP_002181407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407393|gb|EEC47330.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 443

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK-VILEDTL 301
           LS KR     VV     L GI+T+ DI R     H D +  SV +VM  NP  V + D+ 
Sbjct: 31  LSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSA 90

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +     ++  H    L VVDD    +G++     L   I
Sbjct: 91  MDALTTMVENH-FRHLPVVDDQGSVVGLLDIAKCLNDAI 128


>gi|160945499|ref|ZP_02092725.1| hypothetical protein FAEPRAM212_03028 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443230|gb|EDP20235.1| hypothetical protein FAEPRAM212_03028 [Faecalibacterium prausnitzii
           M21/2]
 gi|295105351|emb|CBL02895.1| glutamine--fructose-6-phosphate transaminase [Faecalibacterium
           prausnitzii SL3/3]
          Length = 606

 Score = 40.0 bits (92), Expect = 0.58,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 10/143 (6%)

Query: 58  EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           EK+++I G V + G G + H   +G      LA    P+    A+E  + D  ++  +DL
Sbjct: 285 EKLRSI-GTVHLVGCGTAMHAGMVGKTAIEALARV--PAEVDIASEFRYRD-PILKPEDL 340

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I++S SG + +  A L  A+   +P++AI +   S +A  AD V+     PE     +A
Sbjct: 341 VIIISQSGETSDTLAALKLAKSRGVPVLAIVNVVGSSIARAADYVMYTYAGPEIA---VA 397

Query: 175 PTTSAIMQLAIGDALAIALLESR 197
            T + ++QL +    A+ L  +R
Sbjct: 398 STKAYMVQLCVLYLFALRLAYAR 420


>gi|312877835|ref|ZP_07737783.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795382|gb|EFR11763.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 123

 Score = 40.0 bits (92), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K      ++
Sbjct: 22  ALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKAVITADKN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    +LLR+H+IS + V+D+  K +G+V   D++ + I
Sbjct: 82  DDIKDVAKLLREHDISAVPVLDNG-KVVGLVGLEDIVDYFI 121


>gi|293553913|ref|ZP_06674518.1| transcriptional regulator, RpiR family [Enterococcus faecium E1039]
 gi|294615479|ref|ZP_06695347.1| transcriptional regulator [Enterococcus faecium E1636]
 gi|291591682|gb|EFF23323.1| transcriptional regulator [Enterococcus faecium E1636]
 gi|291601901|gb|EFF32148.1| transcriptional regulator, RpiR family [Enterococcus faecium E1039]
          Length = 282

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 14/135 (10%)

Query: 66  RVVITGIGKSGHIGSK-----LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           RV   G+G S  + +      L S +A++ +  + +   EAS     ++T  +  +++S 
Sbjct: 133 RVYFFGVGGSEIVATDAYHKFLRSPIATSHSTDYHIQLMEAS-----LLTEKNCAVLISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSA 179
           +G S E   I    R+     I ITS+  S +A   D+V +++ +E E     LA   S 
Sbjct: 188 TGQSKETIHIAETVRKTGAKTIVITSQANSSLAKLGDVVFISISEETEFRSEALA---SR 244

Query: 180 IMQLAIGDALAIALL 194
           I QL+I D+L + L+
Sbjct: 245 ISQLSILDSLYVILM 259


>gi|157693096|ref|YP_001487558.1| 3-hexulose-6-phosphate isomerase [Bacillus pumilus SAFR-032]
 gi|157681854|gb|ABV62998.1| 3-hexulose-6-phosphate isomerase [Bacillus pumilus SAFR-032]
          Length = 185

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V ++G G+SG +G   A  L   G  ++ +             T +D++IV S SG ++
Sbjct: 38  KVFVSGAGRSGLMGKSFAMRLTHIGVKAYVIGETNTPS-----FTEEDILIVGSGSGRTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL---PKEPESCPHG-LAPTTSAIM 181
            L  +   A+     + A T   +S +A  +D V+ L   PK+ +   H  + P  S   
Sbjct: 93  TLLVLAKKAKAIGGKVAAFTLSAQSPLADLSDEVILLSGAPKDQQGGSHDTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ + L+E +    +  Y  H
Sbjct: 153 QSLLLTYDAVILRLMEMKELDTHTMYGHH 181


>gi|217972559|ref|YP_002357310.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS223]
 gi|217497694|gb|ACK45887.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS223]
          Length = 488

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++   E T L    +L
Sbjct: 118 FAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTVAEGTKLDEVQKL 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  H I  ++VVDD  K  G++   D 
Sbjct: 175 MHSHRIEKVLVVDDNYKLKGLITVKDF 201


>gi|59801138|ref|YP_207850.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA
           1090]
 gi|254493820|ref|ZP_05106991.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae 1291]
 gi|260440415|ref|ZP_05794231.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|268594881|ref|ZP_06129048.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae 35/02]
 gi|268596741|ref|ZP_06130908.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA19]
 gi|268599099|ref|ZP_06133266.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|268601450|ref|ZP_06135617.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
 gi|268603784|ref|ZP_06137951.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|268682252|ref|ZP_06149114.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
 gi|268684405|ref|ZP_06151267.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
 gi|268686719|ref|ZP_06153581.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
 gi|59718033|gb|AAW89438.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA 1090]
 gi|226512860|gb|EEH62205.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae 1291]
 gi|268548270|gb|EEZ43688.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae 35/02]
 gi|268550529|gb|EEZ45548.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA19]
 gi|268583230|gb|EEZ47906.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|268585581|gb|EEZ50257.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
 gi|268587915|gb|EEZ52591.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|268622536|gb|EEZ54936.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
 gi|268624689|gb|EEZ57089.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
 gi|268627003|gb|EEZ59403.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 282

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 47/175 (26%), Positives = 81/175 (46%), Gaps = 30/175 (17%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA--- 83
           A  +++ E+R L   ES L+  ++   H           RV   G+G SG +        
Sbjct: 101 AAAALLGERRFLK--ESELENGIATLMHAR---------RVEFYGVGNSGIVAQDAQHKF 149

Query: 84  -----STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                ST+A   T +  + A+        +++  D+++ +S +GSS EL   +  A+   
Sbjct: 150 FRFGMSTVAYVDTHTQLMAAS--------VLSDQDVLVAISNTGSSIELLDAVSIAKENG 201

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +IA+T  N S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 202 ASVIALT-RNDSPLAQLADCVLSVATQENAELY--TPMVSRLLQLAVIDILAIGL 253


>gi|42543313|pdb|1PVM|A Chain A, Crystal Structure Of A Conserved Cbs Domain Protein Ta0289
           Of Unknown Function From Thermoplasma Acidophilum
 gi|42543314|pdb|1PVM|B Chain B, Crystal Structure Of A Conserved Cbs Domain Protein Ta0289
           Of Unknown Function From Thermoplasma Acidophilum
          Length = 184

 Score = 39.7 bits (91), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 62/129 (48%), Gaps = 7/129 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G +F+    +M+S  +   V     + DA+ I++E     + V D+     G+++E  I 
Sbjct: 5   GHMFMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSII 62

Query: 274 RNF---HKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + F   +K  + + +  VM K  PKV  +  +  VA   L ++ +    VVDD  + +GI
Sbjct: 63  KRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVA-AYLSENGLERCAVVDDPGRVVGI 121

Query: 330 VHFLDLLRF 338
           V   DL R+
Sbjct: 122 VTLTDLSRY 130


>gi|330684497|gb|EGG96213.1| N-acetylmuramic acid 6-phosphate etherase [Staphylococcus
           epidermidis VCU121]
          Length = 295

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 79/186 (42%), Gaps = 24/186 (12%)

Query: 5   FSHFKSVTRKGHSL-MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
            +H  + +R   ++ +   ++Q AL+++  E + ++     +  EL+     A+ K K  
Sbjct: 1   MNHLTTESRNTETMHLDEMSIQEALQTMNDEDQFVAKAIEPIIPELTKVIKEAISKFKK- 59

Query: 64  KGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASH------- 103
            GR++  G G SG +G   A+    T             G       A E +        
Sbjct: 60  HGRLIYIGAGTSGRLGVLDAAECVPTFNTSPDEVIGIIAGGSKAMTEAVEGAEDNEEQGK 119

Query: 104 GDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            DL  I  ++DD++I +S SG +  +KA L YA       ++++    S ++     VL 
Sbjct: 120 ADLKAIQLSKDDIVIGISASGRTPYVKAALAYANEVGAVSVSLSCNTNSEMSKLTQYVLE 179

Query: 162 LPKEPE 167
           +P  PE
Sbjct: 180 VPVGPE 185


>gi|307823499|ref|ZP_07653728.1| Nucleotidyl transferase [Methylobacter tundripaludum SV96]
 gi|307735484|gb|EFO06332.1| Nucleotidyl transferase [Methylobacter tundripaludum SV96]
          Length = 350

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+     L +AI ++         V D+  +L G++T+GDI R   + L+   +V +VM 
Sbjct: 9   LINPQTSLQEAIRVIDAAALQIALVSDDLGRLSGVVTDGDIRRALMRGLSLDHAVAEVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            NPKV   +   T    ++  HN+  L ++D  +K +G+
Sbjct: 69  ANPKVASINDSKTKMCAVMEAHNLIHLPILDADRKVVGL 107


>gi|304410029|ref|ZP_07391648.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS183]
 gi|307302258|ref|ZP_07582016.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica BA175]
 gi|304351438|gb|EFM15837.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS183]
 gi|306914296|gb|EFN44717.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica BA175]
          Length = 488

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++   E T L    +L
Sbjct: 118 FAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTVAEGTKLDEVQKL 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  H I  ++VVDD  K  G++   D 
Sbjct: 175 MHSHRIEKVLVVDDNYKLKGLITVKDF 201


>gi|304315356|ref|YP_003850503.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588815|gb|ADL59190.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 187

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 32/104 (30%), Positives = 60/104 (57%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL--NTLSVEDVMIKN 292
           G  + +A +I++EK+ G + +V    + +G+ITE DI R    KDL  + +++ +VM +N
Sbjct: 23  GISVAEAASIMTEKKVGSI-IVKSNSEPEGLITESDIIRKVVSKDLAASKVTIGEVMSRN 81

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I  +  L+ A +L+ +++I  L VV D    +GI+   D++
Sbjct: 82  LISIEPERELSDAARLMAKNSIRRLPVVKD-GALVGILTSSDVM 124


>gi|223042414|ref|ZP_03612463.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus capitis SK14]
 gi|222444077|gb|EEE50173.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus capitis SK14]
          Length = 293

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L      D ++ ++ +G   E
Sbjct: 135 IFIYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP++ ITS   + VA  +DIVL+  +  E+    +  TTS   Q+   
Sbjct: 195 MRSIAKVVSDYHIPVVTITSTKDNPVANRSDIVLSYGQTDEN-EMRMGATTSLFAQMFTI 253

Query: 187 DAL 189
           D L
Sbjct: 254 DVL 256


>gi|260590051|ref|ZP_05855964.1| CBS domain protein [Blautia hansenii DSM 20583]
 gi|331084367|ref|ZP_08333471.1| hypothetical protein HMPREF0992_02395 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539563|gb|EEX20132.1| CBS domain protein [Blautia hansenii DSM 20583]
 gi|330401631|gb|EGG81212.1| hypothetical protein HMPREF0992_02395 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 145

 Score = 39.7 bits (91), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 12/98 (12%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           ++ C+ +++E  K  G ITEGD+        DLN  S E+V I + +   + T + V   
Sbjct: 33  KYSCIPIINERGKYTGTITEGDLLWGLKNRADLNLKSAEEVPITSFERRTDYTPIRVDSD 92

Query: 308 L-------LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +       +RQ+ +    VVDD +  IGIV   D++++
Sbjct: 93  MEDLLDKAMRQNFVP---VVDDQKNFIGIVTRRDIMQY 127


>gi|323443598|gb|EGB01212.1| RpiR family transcriptional regulator [Staphylococcus aureus O46]
          Length = 292

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 16/178 (8%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R   ++       +  Q     + +K  +  + + G G S  
Sbjct: 88  LIENESVETLKNKMIA--RATDTMRFVATNIMDAQIDAICDVLKNART-IFLFGFGASSL 144

Query: 78  IGSKLASTLASTGTPSFFVHAAE------ASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
               L   L+  G     +H         A+H D       D +I ++  GS  EL++I 
Sbjct: 145 TIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDD------RDCMIFVTNQGSHSELQSIA 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L   +  E+    +A TTS   QL   D L
Sbjct: 199 QVATHYSIPIITISSTANNPVAQIADYALIYGRTDEN-EMRMAATTSLFAQLFTVDIL 255


>gi|300710145|ref|YP_003735959.1| CBS domain containing membrane protein [Halalkalicoccus jeotgali
           B3]
 gi|299123828|gb|ADJ14167.1| CBS domain containing membrane protein [Halalkalicoccus jeotgali
           B3]
          Length = 380

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V +G+ L GI+T   I  +  ++L+ ++VE +       +  DT +  A+ LLR+H 
Sbjct: 93  VAPVFDGEGLWGIVTADAILESVLENLDAITVEQIYTDEVVSVNRDTTVGRAINLLREHG 152

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           IS L V+ D  +  G+V   DL
Sbjct: 153 ISRLPVLADDGQLEGVVTTHDL 174


>gi|269218581|ref|ZP_06162435.1| integral membrane transporter with CBS domain [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269211692|gb|EEZ78032.1| integral membrane transporter with CBS domain [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 415

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHK-DLNTLSVEDVMI 290
           + I  PL  A+++ +   F  V VV E    L G++   D+ R + + +  +L+V D+M 
Sbjct: 206 IGIDAPLDKAMSLFTRSGFSRVPVVGESADDLHGVVYLKDVLRRWLRGNTESLTVADLM- 264

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + P  + E  ++   M+ ++ + + + +VVD+     G+V   DL+
Sbjct: 265 REPVFVPETKVVDDLMREMQANQVHIALVVDEYGGIAGLVTIEDLV 310


>gi|258405112|ref|YP_003197854.1| inosine-5'-monophosphate dehydrogenase [Desulfohalobium retbaense
           DSM 5692]
 gi|257797339|gb|ACV68276.1| inosine-5'-monophosphate dehydrogenase [Desulfohalobium retbaense
           DSM 5692]
          Length = 485

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDT 300
           A+ I+SE R   + VV EG  L GI+T  D+   F KDL T +V DVM  KN   +   T
Sbjct: 109 ALDIMSEYRISGLPVVTEGH-LVGIVTNRDV--RFVKDLQT-TVADVMTSKNLVTVPVGT 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  A + L    I  L+VVD+     G++   D+
Sbjct: 165 TMEEAKKHLHASRIEKLLVVDEDNNLRGLITIKDI 199


>gi|242310616|ref|ZP_04809771.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT
           98-5489]
 gi|239523014|gb|EEQ62880.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT
           98-5489]
          Length = 483

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I    +   V VVD+   L GI+T  D+   F  DLN L V++VM K P +  +
Sbjct: 105 LMQAKAITDNYKISGVPVVDDSGSLIGILTNRDM--RFETDLNRL-VKEVMTKAPLITAQ 161

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A  ++ +H I  L +V++     G++   D+ +
Sbjct: 162 VGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQK 201


>gi|307154955|ref|YP_003890339.1| signal transduction histidine kinase [Cyanothece sp. PCC 7822]
 gi|306985183|gb|ADN17064.1| signal transduction histidine kinase [Cyanothece sp. PCC 7822]
          Length = 729

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 51/92 (55%), Gaps = 7/92 (7%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVIL---ED 299
           ++S+ R   + VV+EG  L G+  E +  +    +++L  ++V   M K P V L   E+
Sbjct: 56  LISQARASIILVVEEGHLL-GVFDESEALKVITTNRNLEQMTVAQAM-KPPVVALRTAEN 113

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             +  A+ LLRQH I  L V+D+ +K  GI++
Sbjct: 114 PDIFQALALLRQHQIYHLPVLDEPEKLAGIIN 145


>gi|149918154|ref|ZP_01906646.1| CBS domain pair protein [Plesiocystis pacifica SIR-1]
 gi|149820914|gb|EDM80321.1| CBS domain pair protein [Plesiocystis pacifica SIR-1]
          Length = 639

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)

Query: 239 LID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVEDVMIK 291
           L+D A +++  +R   V V DEG KL G+I+   + R   +      D   ++V D+M  
Sbjct: 523 LVDLAASLMDWERIRHVPVEDEG-KLVGLISHRAVLRLVARGHLSRADSEKVAVRDIMRA 581

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P  I  +T     +Q++R  NI+ L VV +  + +GIV   DL+
Sbjct: 582 DPITIKPETSTLECLQIMRDKNIAALPVV-EGDRLVGIVTEHDLI 625


>gi|123441739|ref|YP_001005723.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088700|emb|CAL11505.1| putative LacI-family regulatory protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 246

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RVIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVAC 154
             +  +     + +D + I+LS SG ++E+  I   A +FS+    +I++T+ + S +A 
Sbjct: 145 --DPYYPINSDMYQDAIAIILSVSGETEEIIRI---ANQFSLQHCKIISLTNSDNSTLAK 199

Query: 155 HADIVLTLPKEP 166
            AD+ ++    P
Sbjct: 200 MADLNISYHMPP 211


>gi|314939695|ref|ZP_07846919.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133a04]
 gi|314942224|ref|ZP_07849076.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133C]
 gi|314948857|ref|ZP_07852227.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0082]
 gi|314950799|ref|ZP_07853871.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133A]
 gi|314992221|ref|ZP_07857661.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133B]
 gi|314995221|ref|ZP_07860334.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133a01]
 gi|313590551|gb|EFR69396.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133a01]
 gi|313593221|gb|EFR72066.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133B]
 gi|313597014|gb|EFR75859.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133A]
 gi|313598996|gb|EFR77841.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133C]
 gi|313641030|gb|EFS05610.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0133a04]
 gi|313644730|gb|EFS09310.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           TX0082]
          Length = 642

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 332 RIYIVACGTSYHAGLAGKQTLEKLTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 391

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 392 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 448

Query: 186 GDALAIALLESRNF 199
              LA A+ + + F
Sbjct: 449 LTLLAKAIGDKKEF 462


>gi|308189641|ref|YP_003922572.1| transcriptional regulator [Mycoplasma fermentans JER]
 gi|307624383|gb|ADN68688.1| putative transcriptional regulator [Mycoplasma fermentans JER]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-------LGMITRDDLIIVLS 119
           + I G G S  I   L S L   G P         +H D       L  +T +D++IV S
Sbjct: 136 IYIHGCGSSQRISMNLVSNLLKIGKPVI-------AHSDFHIFFPSLAHVTENDVVIVYS 188

Query: 120 WSGSSDELKAILYYARRFSIPLIAITS--ENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            +  + E   ++  A++   P+I +TS  E   ++A    + L   K   S    L P++
Sbjct: 189 NNLQTMEAHFVIEQAKKQKAPIIVLTSSQEEDKLIA----VKLRYHKIQSST--MLVPSS 242

Query: 178 SAIMQLAIGDALAIALLE 195
           S I Q+ I D L  A+LE
Sbjct: 243 SKIAQMLITDLLFEAVLE 260


>gi|21218764|ref|NP_624543.1| hypothetical protein SCO0210 [Streptomyces coelicolor A3(2)]
 gi|5777683|emb|CAB53434.1| hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 213

 Score = 39.7 bits (91), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMIK 291
            P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM  
Sbjct: 12  TPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMSS 71

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR 
Sbjct: 72  PAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLRV 118


>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
          Length = 170

 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 53/126 (42%), Gaps = 28/126 (22%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------------------FR 274
           +I A  IL E     V VVD+  KL GI+ + DI                         +
Sbjct: 38  VIQAAKILLENHINGVPVVDKNGKLAGILCQSDIISQQKKFPVPSLFAFLDGFISIPSMK 97

Query: 275 NFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +  K++  +   +VE  M  NP  +  DT +     L+  +N   L VVDD  K IGIV 
Sbjct: 98  HIEKEVQKIAAVTVEHAMSVNPVTVKSDTSIEAVAALMVDNNFHTLPVVDDG-KLIGIVG 156

Query: 332 FLDLLR 337
             D+LR
Sbjct: 157 KEDILR 162


>gi|18976693|ref|NP_578050.1| related to inosine monophosphate dehydrogenase [Pyrococcus furiosus
           DSM 3638]
 gi|18892271|gb|AAL80445.1| related to inosine monophosphate dehydrogenase [Pyrococcus furiosus
           DSM 3638]
          Length = 392

 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 15/110 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRNFHKDLN-------TLSVE 286
           A+  + +     + VVDE  KL+G++T  D+        FR    +L        ++ + 
Sbjct: 152 ALATMRDHGISRIPVVDEEGKLEGLVTLHDLIIRFIKPRFRAQAGELAGEKIPPFSMKLR 211

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + MI+    IL D  +  A+  ++ +NI  L+VVD+  K +GI+   DLL
Sbjct: 212 EAMIRGVITILPDATIREAVATMKDNNIDGLVVVDENNKVVGILTVKDLL 261


>gi|331269292|ref|YP_004395784.1| nucleotidyl transferase [Clostridium botulinum BKT015925]
 gi|329125842|gb|AEB75787.1| nucleotidyl transferase [Clostridium botulinum BKT015925]
          Length = 353

 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 7/96 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE----DVMIKNPK 294
           L+ A+ ++ +   G V VVD+  KL G IT+GDI R     +N LS++    +VM KNP 
Sbjct: 15  LLKALDVIDKAAKGIVYVVDDNMKLLGSITDGDIRRAL---INKLSLQSGIIEVMNKNPI 71

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            + E+       +++ ++ I  L +VD   K +  +
Sbjct: 72  RVEENVDRIEQKKIMIKNAIRELPIVDKDNKLVDTI 107


>gi|218290704|ref|ZP_03494786.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239242|gb|EED06441.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 494

 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 53/100 (53%), Gaps = 5/100 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           PL DA  ++S+ R   V +V+ G QKL GIIT  D+   F +D ++  + +VM +   + 
Sbjct: 110 PLRDAEALMSKYRISGVPIVECGSQKLIGIITNRDL--RFERD-DSRPIGEVMTRENLIT 166

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L++H I  L +VD      G++   D+
Sbjct: 167 APVGTTLAEAKEILQRHKIEKLPLVDAEGNLRGLITIKDI 206


>gi|85715671|ref|ZP_01046651.1| IMP dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85697610|gb|EAQ35487.1| IMP dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 498

 Score = 39.7 bits (91), Expect = 0.62,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++S+  F  + VV  G      KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LSDALALMSDHGFSGIPVVTGGSGASPGKLVGILTNRDV--RFATDPRQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQEEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|319776798|ref|YP_004136449.1| transcriptional regulator, rpir family [Mycoplasma fermentans M64]
 gi|318037873|gb|ADV34072.1| Transcriptional regulator, RpiR family [Mycoplasma fermentans M64]
          Length = 288

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 61/138 (44%), Gaps = 22/138 (15%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-------LGMITRDDLIIVLS 119
           + I G G S  I   L S L   G P         +H D       L  +T +D++IV S
Sbjct: 136 IYIHGCGSSQRISMNLVSNLLKIGKPVI-------AHSDFHIFFPSLAHVTENDVVIVYS 188

Query: 120 WSGSSDELKAILYYARRFSIPLIAITS--ENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
            +  + E   ++  A++   P+I +TS  E   ++A    + L   K   S    L P++
Sbjct: 189 NNLQTMEAHFVIEQAKKQKAPIIVLTSSQEEDKLIA----VKLRYHKIQSST--MLVPSS 242

Query: 178 SAIMQLAIGDALAIALLE 195
           S I Q+ I D L  A+LE
Sbjct: 243 SKIAQMLITDLLFEAVLE 260


>gi|291085018|ref|ZP_06351789.2| N-acetylmuramic acid 6-phosphate etherase [Citrobacter youngae ATCC
           29220]
 gi|291071667|gb|EFE09776.1| N-acetylmuramic acid 6-phosphate etherase [Citrobacter youngae ATCC
           29220]
          Length = 311

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD--LGM- 108
           GR++  G G SG +G   AS    T             G P   + A E +  +  LG  
Sbjct: 77  GRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDNPQLGAD 136

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  DL++ L+ SG +  +   L YAR      +AI+    S VA  ADI ++ 
Sbjct: 137 DLRTLNLTAQDLVVGLAASGRTPYVIGGLKYARTVGCTTVAISCNPDSPVAHEADIAISP 196

Query: 163 PKEPES 168
              PE+
Sbjct: 197 VVGPEA 202


>gi|270159634|ref|ZP_06188290.1| inosine-5'-monophosphate dehydrogenase [Legionella longbeachae
           D-4968]
 gi|289165580|ref|YP_003455718.1| IMP dehydrogenase/GMP reductase [Legionella longbeachae NSW150]
 gi|269987973|gb|EEZ94228.1| inosine-5'-monophosphate dehydrogenase [Legionella longbeachae
           D-4968]
 gi|288858753|emb|CBJ12658.1| putative IMP dehydrogenase/GMP reductase [Legionella longbeachae
           NSW150]
          Length = 490

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 6/97 (6%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDT 300
           + ++ +  F  V VVD G+ L GI+T  DI   F  +L +LSVE VM    K++   E  
Sbjct: 111 LDVMEKYNFSGVPVVD-GEDLVGIVTSRDI--RFETNL-SLSVEQVMTPKAKLVTVKEGA 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + LL +H I  L+VV+D     G++   D+ +
Sbjct: 167 SREEVLSLLHKHRIEKLLVVNDAFHLRGLITVKDIQK 203


>gi|281421756|ref|ZP_06252755.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
 gi|281404251|gb|EFB34931.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
          Length = 494

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 28/106 (26%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+    H D     +++VM   
Sbjct: 105 IRRGSTVKDALDMMHDYHIGGIPVVDDENHLVGIVTNRDLRFERHMD---KKIDEVMTSE 161

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V     T L  A  +L+++ I  L VVD     +G++ + D+ +
Sbjct: 162 NLVTTHIQTDLVAAAAILQENKIEKLPVVDSENHLVGLITYKDITK 207


>gi|323465293|gb|ADX77446.1| 6-phospho 3-hexuloisomerase [Staphylococcus pseudintermedius ED99]
          Length = 182

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 50/112 (44%), Gaps = 9/112 (8%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   V   +A    V +TG G+SG + +  A  L   G  +  V  A         I +
Sbjct: 28  QFEQVVSDAEA----VFVTGKGRSGFVANGFAMRLNQLGKKAHVVGEATTPS-----IQK 78

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            D++IV+S SGS+  LK +   A      +  +T+   S +   A++ L LP
Sbjct: 79  GDVLIVISGSGSTTHLKLLADKAHEVGATIALVTTATDSKIGELANVTLILP 130


>gi|182436550|ref|YP_001824269.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326777173|ref|ZP_08236438.1| inosine-5'-monophosphate dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465066|dbj|BAG19586.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326657506|gb|EGE42352.1| inosine-5'-monophosphate dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 500

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  T  V +VM   P V   
Sbjct: 114 LGEADALCAKFRISGVPVTDAAGKLLGIVTNRDMA--FESD-RTRQVREVMTPMPLVTGR 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  V AM+LLR+H I  L +VDD     G++   D 
Sbjct: 171 VGISGVEAMELLRRHKIEKLPLVDDAGILKGLITVKDF 208


>gi|118443477|ref|YP_877467.1| hypothetical protein NT01CX_1385 [Clostridium novyi NT]
 gi|118133933|gb|ABK60977.1| CBS domain protein, putative [Clostridium novyi NT]
          Length = 142

 Score = 39.7 bits (91), Expect = 0.63,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 13/101 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNPK 294
           A  ++SE   G + V   G+K+ GI+T+ DI        +N H+      V+D+M  NP 
Sbjct: 23  AAQMMSEYNVGSIPVC-RGEKVVGIVTDRDITLRSSAEGKNVHQQ----KVKDIMTSNPV 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+          +++ +  I  L VV+D +K +GIV   DL
Sbjct: 78  VVNPTMDTNEVARIMGERQIRRLPVVED-EKVVGIVALGDL 117


>gi|332158092|ref|YP_004423371.1| hypothetical protein PNA2_0450 [Pyrococcus sp. NA2]
 gi|331033555|gb|AEC51367.1| hypothetical protein PNA2_0450 [Pyrococcus sp. NA2]
          Length = 172

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----------- 281
           V+   PL + I++ + +    V VVDE  KL G IT  D+   F                
Sbjct: 46  VRPETPLFELISMFTSEETSAV-VVDEEGKLVGFITMKDLLHYFVPPRKYSIAGFGMLKK 104

Query: 282 -----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   VED+MIK P VI  +  L  A++L+ +     L VVD  +K  GI+   D++
Sbjct: 105 YILSRATRVEDIMIKKPIVIDVNENLGQAIKLMVETGKHHLPVVDKDRKVYGILEVKDII 164

Query: 337 RF 338
           R 
Sbjct: 165 RL 166


>gi|322390815|ref|ZP_08064325.1| glucosamine-fructose-6-phosphate aminotransferase [Streptococcus
           parasanguinis ATCC 903]
 gi|321142485|gb|EFX37953.1| glucosamine-fructose-6-phosphate aminotransferase [Streptococcus
           parasanguinis ATCC 903]
          Length = 602

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 8/153 (5%)

Query: 60  IKAIK--GRVVITGIGKSGHIGSKLASTLAS-TGTPSFFVHAAEASHGDLGMITRDDLII 116
           IKA++   R+ I   G S H G      L   T TP     ++E  +G + ++++  L I
Sbjct: 284 IKAVQEADRIYILAAGTSYHAGFASKKMLEELTDTPVELGISSEWGYG-MPLLSKKPLFI 342

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            +S SG + + + +L  A    IP + +T+   S ++  AD+ + L   PE     +A T
Sbjct: 343 FISQSGETADSRQVLVKANEMGIPSLTVTNVPGSTLSREADMTMLLHAGPEIA---VAST 399

Query: 177 TSAIMQLAIGDALAIALLESR-NFSENDFYVLH 208
            +   Q+A    LA A+ E+  N     F ++H
Sbjct: 400 KAYTAQIAALAFLAKAVGEANGNEKAKAFDLVH 432


>gi|242242969|ref|ZP_04797414.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|242233570|gb|EES35882.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           W23144]
          Length = 432

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 239 LIDAITILSEKRFGC------VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           L D++TI   K+           +V+E  KL GI+T  +I     +DL    +  VM KN
Sbjct: 203 LFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTSREIINMNEEDL----LGKVMTKN 258

Query: 293 P-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  V L +T+ + A  LL    I +L V D+ +KA+G+++  D+L+
Sbjct: 259 PLSVKLTNTVASCA-HLLIWEGIELLPVTDNNKKAVGVINRQDVLK 303


>gi|238620215|ref|YP_002915041.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.16.4]
 gi|238381285|gb|ACR42373.1| glucosamine--fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus M.16.4]
          Length = 591

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 54/233 (23%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D+II +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLIASEYHNF---RVKKGDIIIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LES + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLESAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|310641459|ref|YP_003946217.1| signal transduction protein with cbs domains [Paenibacillus
           polymyxa SC2]
 gi|309246409|gb|ADO55976.1| Putative signal transduction protein with CBS domains
           [Paenibacillus polymyxa SC2]
          Length = 225

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 6/87 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL- 297
           DA+ +L ++  G + V  E Q+L GI+T  D+ +    H DL+T+ V   M +  ++   
Sbjct: 108 DAVLMLFQQNTGTLMVTGEEQELIGIVTRKDLLKVMLGHTDLHTVPVTMAMTRRAQMTTL 167

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDD 322
              D+LL    +L+R H I+ L V+D+
Sbjct: 168 APGDSLLEAISRLIR-HQINCLPVLDE 193


>gi|302558921|ref|ZP_07311263.1| inosine-5'-monophosphate dehydrogenase [Streptomyces griseoflavus
           Tu4000]
 gi|302476539|gb|EFL39632.1| inosine-5'-monophosphate dehydrogenase [Streptomyces griseoflavus
           Tu4000]
          Length = 502

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D  ++L GI+T  D+   F  D  T  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTDGNKRLLGIVTNRDMA--FETD-RTRQVREVMTPMPLVTGK 170

Query: 299 DTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGPEAMELLRRHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|226948352|ref|YP_002803443.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|226843963|gb|ACO86629.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 126

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A+ +++E       V DE   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 22  ALNLMNENNINGAPVADEESNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 82  EDIISIAEKILDK-DIIAMPIVDSSKKLLGIVSVEDILK 119


>gi|85374246|ref|YP_458308.1| IMP dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84787329|gb|ABC63511.1| IMP dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 508

 Score = 39.7 bits (91), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           L  A  I+ + +   + V D+G KL GI+T  D+    N  + +  L   D +   P   
Sbjct: 128 LGQAQAIMDQHQISGIPVTDKGGKLVGILTNRDVRFAENPGQPVRELMTTDDLATVPLGT 187

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E+     A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 188 GENE----ARRLLHQRRIEKLVVVDDAYRCIGLITVKDI 222


>gi|332158424|ref|YP_004423703.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           sp. NA2]
 gi|331033887|gb|AEC51699.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           sp. NA2]
          Length = 178

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           ILS+ + G  AVV E  ++ GI+TE DI        KD   + VE++M +NP  I  D  
Sbjct: 30  ILSKNKVGS-AVVMEKDEILGIVTERDILDKVVAKGKDPKEVKVEEIMTRNPVKIEYDYD 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A++++ +  +  ++V     K IG V   DLL
Sbjct: 89  VQDAIEVMTEKGVRRILVT-KFGKPIGFVTATDLL 122


>gi|256790247|ref|ZP_05528678.1| hypothetical protein SlivT_37693 [Streptomyces lividans TK24]
          Length = 213

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMIK 291
            P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM  
Sbjct: 12  TPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMSS 71

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR 
Sbjct: 72  PAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLRV 118


>gi|167626382|ref|YP_001676882.1| malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|241668813|ref|ZP_04756391.1| malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254877345|ref|ZP_05250055.1| inosine-5'-monophosphate dehydrogenase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|167596383|gb|ABZ86381.1| Malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|254843366|gb|EET21780.1| inosine-5'-monophosphate dehydrogenase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 486

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 16/113 (14%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV------ 285
           +++  PL+ A +  ++E R   +A+  EG    GI   G I +N         V      
Sbjct: 38  IQLNIPLVSAAMDTVTESRL-AIAIAQEG----GI---GIIHKNMSIQAQAQEVKKVKRF 89

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+ M+ +P  I +++ +   MQL ++HN S   VVDD    IGIV   D  RF
Sbjct: 90  ENGMVIDPITIKQESSIKEVMQLAKEHNFSGFPVVDDNNMIIGIVTKRD-FRF 141



 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           + + +  E  F    VVD+   + GI+T+ D FR F KDL+   V  +M    +++   E
Sbjct: 108 EVMQLAKEHNFSGFPVVDDNNMIIGIVTKRD-FR-FAKDLDE-PVSSIMTPREQLVTVAE 164

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 165 DASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203


>gi|150021453|ref|YP_001306807.1| inosine-5'-monophosphate dehydrogenase [Thermosipho melanesiensis
           BI429]
 gi|149793974|gb|ABR31422.1| inosine-5'-monophosphate dehydrogenase [Thermosipho melanesiensis
           BI429]
          Length = 483

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 52/99 (52%), Gaps = 9/99 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTL--SVEDVMIKNPKVI 296
           +A  I++E + G + VVDE ++L G++T  DI   RN  + +  L   VED+++ N  + 
Sbjct: 104 EAEKIMAEYKIGGLPVVDEQKRLLGLVTNRDIRFERNLKRPVKELMTPVEDLIVANEGIS 163

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           LE+     A  +L ++ I  L +V       G++   D+
Sbjct: 164 LEE-----ARDILHENKIEKLPLVKSDGTLSGLITIKDI 197


>gi|312794445|ref|YP_004027368.1| cbs domain containing protein [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181585|gb|ADQ41755.1| CBS domain containing protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 123

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 3/101 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K      ++
Sbjct: 22  ALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHFETYPVELAMTKAVITADKN 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    +LLR+H+IS + V+D+  K +G+V   D++ + I
Sbjct: 82  DDIKDVAKLLREHDISAVPVLDNG-KVVGLVGLEDIVDYFI 121


>gi|253582896|ref|ZP_04860114.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
           27725]
 gi|251835102|gb|EES63645.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
           27725]
          Length = 484

 Score = 39.7 bits (91), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 31/51 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E  MI+NP  + ED  +  A  L+R++ IS L V++D  K IGIV   D+
Sbjct: 90  IESGMIRNPVTLKEDCTVGFAEDLMRRYKISGLPVIEDDGKLIGIVTNRDI 140


>gi|284162498|ref|YP_003401121.1| hypothetical protein Arcpr_1399 [Archaeoglobus profundus DSM 5631]
 gi|284012495|gb|ADB58448.1| protein of unknown function DUF39 [Archaeoglobus profundus DSM
           5631]
          Length = 492

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 1/85 (1%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VVD+  +L GI+T  DI +          V+DVM +     L D  +  A + + +HN
Sbjct: 406 LPVVDDEGRLVGIVTSWDIAKAVAMG-KMGKVKDVMTRKVITALPDEPVESAARKMEKHN 464

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           IS L VVD   + +G+V   DL + 
Sbjct: 465 ISALPVVDAKMRVLGLVTSEDLSKL 489


>gi|149181962|ref|ZP_01860449.1| D-fructose-6-phosphate amidotransferase [Bacillus sp. SG-1]
 gi|148850307|gb|EDL64470.1| D-fructose-6-phosphate amidotransferase [Bacillus sp. SG-1]
          Length = 600

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 65/150 (43%), Gaps = 4/150 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      + +       VH A     ++ +++   L I +S SG + 
Sbjct: 292 RIYIIAAGTSYHAGLVGKQFIENIAKIPVEVHVASEFSYNMPLLSEKPLFIFISQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   + F    + IT+   S ++  AD  L L   PE     +A T +   Q+A+
Sbjct: 352 DSRAVLVQVKEFGHKALTITNVPGSTLSREADYTLLLHAGPEIA---VASTKAYTAQIAV 408

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGT 215
              LA    ++R      F ++H  G +GT
Sbjct: 409 LSILADVTAKARGIKPG-FDLIHELGIVGT 437


>gi|161520665|ref|YP_001584092.1| CBS domain-containing protein [Burkholderia multivorans ATCC 17616]
 gi|221196289|ref|ZP_03569336.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2M]
 gi|221202962|ref|ZP_03575981.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2]
 gi|160344715|gb|ABX17800.1| CBS domain containing membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|221176896|gb|EEE09324.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2]
 gi|221182843|gb|EEE15243.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2M]
          Length = 399

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 244 MQAYARTFGQLTCADLMTKNAISIAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTR 303

Query: 333 LDLLR 337
            DL R
Sbjct: 304 ADLTR 308


>gi|114798278|ref|YP_761342.1| CBS domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 144

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 4/117 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TL 283
           G  +  ++    L +A  +L E+R G V  +D   ++ G+++E DI R F +       +
Sbjct: 11  GREVITLRADDTLREAARLLDERRIGAVVTLDADGEIVGVLSERDIVRQFARQGEGALDM 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V + M +    I  D  +  A+QL+    I  L VV +  +  G V   DL+++ I
Sbjct: 71  PVGNAMTRAVITISADAEVDEALQLMTDRRIRHLPVVRNS-RLTGFVSIGDLVKWKI 126


>gi|116753621|ref|YP_842739.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665072|gb|ABK14099.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 261

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 64/119 (53%), Gaps = 13/119 (10%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFH------KDL 280
           S+PL+     ++DA  ++ +++   + VVD    + L+G+++  DIF++        K +
Sbjct: 71  SVPLITEEMDMMDAARLMFQEKVTLLPVVDSPSSRMLRGVVSLLDIFKHLDLSRVPDKPV 130

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + +   DV+   P    +D +  V  ++L + +I+ L VV++  + IGI+   D+L+ G
Sbjct: 131 DAIMSRDVITARP----DDPISKVWDRML-EEDITGLPVVNESGRPIGIITRFDILKRG 184


>gi|117926295|ref|YP_866912.1| inosine-5'-monophosphate dehydrogenase [Magnetococcus sp. MC-1]
 gi|117610051|gb|ABK45506.1| inosine-5'-monophosphate dehydrogenase [Magnetococcus sp. MC-1]
          Length = 488

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           PL  A+ +++ ++   + +V+   ++ GIIT  D+   F  D ++L + D+M +  K++ 
Sbjct: 105 PLKAALELMARRKVSGIPIVEADGRVAGIITNRDV--RFATD-DSLPIRDLMTQGEKLVT 161

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +   +     L   H I  L++VDD  K  G++   D+
Sbjct: 162 VPQGVDMGTVKHLFHLHRIEKLLMVDDQYKLTGLITVKDI 201


>gi|296138636|ref|YP_003645879.1| inosine-5'-monophosphate dehydrogenase [Tsukamurella paurometabola
           DSM 20162]
 gi|296026770|gb|ADG77540.1| inosine-5'-monophosphate dehydrogenase [Tsukamurella paurometabola
           DSM 20162]
          Length = 514

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQL 308
           R   + V D+   L GIIT  D+   F  D     V +VM K P +  ++ +    A+ L
Sbjct: 138 RISGLPVTDDKGTLVGIITNRDM--RFEVDFER-PVAEVMTKAPLITAQEGVTAEAALGL 194

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 195 LRRHKIEKLPIVDGSGKLTGLITVKDFVK 223


>gi|297619903|ref|YP_003708008.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297378880|gb|ADI37035.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 300

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 52/103 (50%), Gaps = 1/103 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  + DA  +L+E     + ++  G KLKGI++  DI +   ++     ++ +M K+   
Sbjct: 187 GKTVRDAAKLLAENSISGIPIIKNG-KLKGIVSLHDIAKALVQNKENEKIDAIMTKDIWT 245

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           I +   +  A+  +   NI  L+VVDD +  +G++   D+L  
Sbjct: 246 INQYEKIYDALVKMETENIGRLVVVDDSENIVGMLTRTDILNL 288


>gi|77359886|ref|YP_339461.1| hypothetical protein PSHAa0939 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874797|emb|CAI86018.1| putative membrane protein [Pseudoalteromonas haloplanktis TAC125]
          Length = 392

 Score = 39.7 bits (91), Expect = 0.66,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 232 LVKIGCPLIDAITILSE---KRFG-CVAVVDE----GQKLKGIITE-GDIFRNFHK---- 278
           L+KI  P +  I  L+    + FG   A +DE     ++LK ++ E G +    H+    
Sbjct: 105 LLKILFPFVVVINWLTNGILRLFGISAAQIDEHSMSKEELKSVLNESGALIPARHQSMLT 164

Query: 279 ---DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              DL  ++VED+MI   +++   + D    ++ QL    +  VL+  D+   A+G +H 
Sbjct: 165 SILDLEQVTVEDIMIPRNEIVAIDINDEWKLISRQLTHAQHTRVLLYRDNIDDAVGFIHS 224

Query: 333 LDLLRF 338
            D LR 
Sbjct: 225 RDALRL 230


>gi|329577274|gb|EGG58737.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1467]
          Length = 461

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S  R   V +V+  E +KL GIIT  D+   F  D   + +E+VM K+  V   
Sbjct: 80  DAEELMSRYRISGVPIVETMENRKLVGIITNRDM--RFVTDYQ-IKIEEVMTKDHLVTAP 136

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 137 VGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDI 174


>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
          Length = 153

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V  VM +NP  +   T L+ A+++L +  IS L VVDD  K +GI+   DL+
Sbjct: 2   TKTVAQVMTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 56


>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
          Length = 158

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 28/120 (23%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF----------------RNFHKDL------NT 282
           IL E R   V V D   +L GI+TEGD+                  NF++ +       T
Sbjct: 26  ILIEHRINGVPVTDTEGRLLGIVTEGDLVHRAADERLEPRESVWKENFYRSVFRRRTPET 85

Query: 283 LSVE-----DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              E      VM +    +  +  +TVA +LL  HNI  L V+++ ++ IGI+   DL++
Sbjct: 86  DKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSLPVIEN-ERLIGIISRFDLIK 144


>gi|152975448|ref|YP_001374965.1| RpiR family transcriptional regulator [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024200|gb|ABS21970.1| transcriptional regulator, RpiR family [Bacillus cytotoxicus NVH
           391-98]
          Length = 284

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 4/93 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLTTEAVVIAISHSGSNKALLEALEVAKTKGARIIAITSYQKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            E        ++S + QL++ D L + L   R 
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGLSMQRQ 265


>gi|188582365|ref|YP_001925810.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium populi
           BJ001]
 gi|179345863|gb|ACB81275.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium populi
           BJ001]
          Length = 496

 Score = 39.7 bits (91), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDI--FRNFHKDLNTLSVEDVMIK 291
           L DA  ++ + R   + VV+ G      KL GI+T  D+    N  + +  L   D +I 
Sbjct: 110 LADAFDVMKKNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNTGQPVAELMTRDRLIT 169

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +D     A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 170 VREGVTQDE----AKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|332687457|emb|CBY88872.1| inosine monophosphate dehydrogenase [Saccharomyces bayanus]
 gi|332687460|emb|CBY88874.1| inosine monophosphate dehydrogenase [Saccharomyces bayanus]
          Length = 523

 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVED 287
           P   +G    +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+D
Sbjct: 130 PTTTVG----EAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQD 182

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM KNP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 183 VMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|307718688|ref|YP_003874220.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6192]
 gi|306532413|gb|ADN01947.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6192]
          Length = 481

 Score = 39.7 bits (91), Expect = 0.68,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G  + +A  ++ +     + VVD    L GI+T  D+   F KD   L VE+VM  +
Sbjct: 101 VRKGQTVREAKALMQQYNISGLPVVDGEGSLCGILTGRDL--RFVKD-ERLKVEEVMTPD 157

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P V      +  A +   +H +  L +VD+  K IG+V   D+
Sbjct: 158 PVVERGRPTIDQAQEAFDRHKVEKLPLVDEGGKLIGLVTVKDI 200


>gi|305662873|ref|YP_003859161.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304377442|gb|ADM27281.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 388

 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           AI  +   R   V VV+    + GI++  ++ R  ++   L  + VE +M   P  I +D
Sbjct: 84  AIASIVNWRAREVPVVNAKGIVIGIVSRNNVLRYVYERGLLPRIRVETIMSSPPITINKD 143

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  A  L+ +  IS L V+DD +K +G++   D++
Sbjct: 144 ESIARARWLMNKSGISRLPVLDDNEKIVGVITLSDII 180


>gi|29377734|ref|NP_816888.1| inosine 5'-monophosphate dehydrogenase [Enterococcus faecalis V583]
 gi|229547171|ref|ZP_04435896.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX1322]
 gi|229550741|ref|ZP_04439466.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis ATCC
           29200]
 gi|255971510|ref|ZP_05422096.1| IMP dehydrogenase [Enterococcus faecalis T1]
 gi|255974460|ref|ZP_05425046.1| IMP dehydrogenase [Enterococcus faecalis T2]
 gi|256618567|ref|ZP_05475413.1| IMP dehydrogenase [Enterococcus faecalis ATCC 4200]
 gi|256761815|ref|ZP_05502395.1| IMP dehydrogenase [Enterococcus faecalis T3]
 gi|256854942|ref|ZP_05560303.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis T8]
 gi|256957055|ref|ZP_05561226.1| IMP dehydrogenase [Enterococcus faecalis DS5]
 gi|256960919|ref|ZP_05565090.1| IMP dehydrogenase [Enterococcus faecalis Merz96]
 gi|256963943|ref|ZP_05568114.1| IMP dehydrogenase [Enterococcus faecalis HIP11704]
 gi|257078732|ref|ZP_05573093.1| IMP dehydrogenase [Enterococcus faecalis JH1]
 gi|257081308|ref|ZP_05575669.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           E1Sol]
 gi|257083966|ref|ZP_05578327.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis Fly1]
 gi|257087796|ref|ZP_05582157.1| IMP dehydrogenase [Enterococcus faecalis D6]
 gi|257088441|ref|ZP_05582802.1| IMP dehydrogenase [Enterococcus faecalis CH188]
 gi|257417383|ref|ZP_05594377.1| IMP dehydrogenase [Enterococcus faecalis AR01/DG]
 gi|257418880|ref|ZP_05595874.1| IMP dehydrogenase [Enterococcus faecalis T11]
 gi|257421305|ref|ZP_05598295.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis X98]
 gi|293384814|ref|ZP_06630659.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis R712]
 gi|293388236|ref|ZP_06632755.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis S613]
 gi|294781209|ref|ZP_06746556.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           PC1.1]
 gi|307277352|ref|ZP_07558450.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2134]
 gi|307286508|ref|ZP_07566607.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0109]
 gi|307289981|ref|ZP_07569907.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0411]
 gi|312901341|ref|ZP_07760622.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0470]
 gi|312902988|ref|ZP_07762177.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0635]
 gi|312908856|ref|ZP_07767795.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           512]
 gi|312952974|ref|ZP_07771830.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0102]
 gi|29345202|gb|AAO82958.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis V583]
 gi|229304174|gb|EEN70170.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis ATCC
           29200]
 gi|229307753|gb|EEN73740.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX1322]
 gi|255962528|gb|EET95004.1| IMP dehydrogenase [Enterococcus faecalis T1]
 gi|255967332|gb|EET97954.1| IMP dehydrogenase [Enterococcus faecalis T2]
 gi|256598094|gb|EEU17270.1| IMP dehydrogenase [Enterococcus faecalis ATCC 4200]
 gi|256683066|gb|EEU22761.1| IMP dehydrogenase [Enterococcus faecalis T3]
 gi|256709455|gb|EEU24502.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis T8]
 gi|256947551|gb|EEU64183.1| IMP dehydrogenase [Enterococcus faecalis DS5]
 gi|256951415|gb|EEU68047.1| IMP dehydrogenase [Enterococcus faecalis Merz96]
 gi|256954439|gb|EEU71071.1| IMP dehydrogenase [Enterococcus faecalis HIP11704]
 gi|256986762|gb|EEU74064.1| IMP dehydrogenase [Enterococcus faecalis JH1]
 gi|256989338|gb|EEU76640.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           E1Sol]
 gi|256991996|gb|EEU79298.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis Fly1]
 gi|256995826|gb|EEU83128.1| IMP dehydrogenase [Enterococcus faecalis D6]
 gi|256997253|gb|EEU83773.1| IMP dehydrogenase [Enterococcus faecalis CH188]
 gi|257159211|gb|EEU89171.1| IMP dehydrogenase [Enterococcus faecalis ARO1/DG]
 gi|257160708|gb|EEU90668.1| IMP dehydrogenase [Enterococcus faecalis T11]
 gi|257163129|gb|EEU93089.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis X98]
 gi|291077896|gb|EFE15260.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis R712]
 gi|291082383|gb|EFE19346.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis S613]
 gi|294451672|gb|EFG20127.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           PC1.1]
 gi|306498975|gb|EFM68467.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0411]
 gi|306502381|gb|EFM71658.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0109]
 gi|306505986|gb|EFM75158.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2134]
 gi|310625294|gb|EFQ08577.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           512]
 gi|310629115|gb|EFQ12398.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0102]
 gi|310633656|gb|EFQ16939.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0635]
 gi|311291574|gb|EFQ70130.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0470]
 gi|315026611|gb|EFT38543.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2137]
 gi|315030105|gb|EFT42037.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4000]
 gi|315033598|gb|EFT45530.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0017]
 gi|315036263|gb|EFT48195.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0027]
 gi|315155040|gb|EFT99056.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0043]
 gi|315165667|gb|EFU09684.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1302]
 gi|315168474|gb|EFU12491.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1341]
 gi|315172091|gb|EFU16108.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1342]
 gi|315174224|gb|EFU18241.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1346]
 gi|315576186|gb|EFU88377.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0309B]
 gi|315579765|gb|EFU91956.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0630]
 gi|315582997|gb|EFU95188.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0309A]
 gi|323479200|gb|ADX78639.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis 62]
          Length = 493

 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S  R   V +V+  E +KL GIIT  D+   F  D   + +E+VM K+  V   
Sbjct: 112 DAEELMSRYRISGVPIVETMENRKLVGIITNRDM--RFVTDYQ-IKIEEVMTKDHLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDI 206


>gi|6322012|ref|NP_012088.1| Imd2p [Saccharomyces cerevisiae S288c]
 gi|729848|sp|P38697|IMDH2_YEAST RecName: Full=Inosine-5'-monophosphate dehydrogenase IMD2;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|458916|gb|AAB69728.1| Yhr216wp [Saccharomyces cerevisiae]
 gi|259146131|emb|CAY79390.1| Imd2p [Saccharomyces cerevisiae EC1118]
 gi|285810128|tpg|DAA06915.1| TPA: Imd2p [Saccharomyces cerevisiae S288c]
 gi|323334874|gb|EGA76220.1| Imd2p [Saccharomyces cerevisiae Vin13]
          Length = 523

 Score = 39.7 bits (91), Expect = 0.69,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVED 287
           P   +G    +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+D
Sbjct: 130 PTTTVG----EAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQD 182

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM KNP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 183 VMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|332712116|ref|ZP_08432044.1| putative signal-transduction protein [Lyngbya majuscula 3L]
 gi|332348922|gb|EGJ28534.1| putative signal-transduction protein [Lyngbya majuscula 3L]
          Length = 464

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 20/143 (13%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI---LSEKRFGCVAVV-DEGQ 261
           VL P   L    V  S+VM      P V    P +  +++   +++ R  CV +  D GQ
Sbjct: 154 VLRPANLLKLRRV--SEVM-----TPQVVNALPTVSVLSLARLMNKHRVSCVVITSDHGQ 206

Query: 262 K---LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNI 314
                 GI+TE DI  F++   +L+ +  +DVM   P  +L  ED+L T A Q +++  +
Sbjct: 207 DNCLPVGIVTERDIVQFQSLKLNLSKVQAQDVM-STPLFLLSPEDSLWT-AHQEMQKRRV 264

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L+V  +  K IGIV    LLR
Sbjct: 265 RRLVVSWNWGKEIGIVTQTTLLR 287



 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 10/96 (10%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVM----IKNPK 294
           D +TI  E R  CV V+ E  KL GI TE DI R     +N   ++V +VM    I  P+
Sbjct: 55  DQLTI-REPRSSCVLVM-ESDKLLGIFTERDIVRLTANGINFEEVTVAEVMAQPVITFPQ 112

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               D     A+ + R+  I  L +VDD  + +G+V
Sbjct: 113 TACRDIF--AALFIFRRFRIRHLPIVDDHGQLVGVV 146


>gi|325266713|ref|ZP_08133389.1| transcriptional regulator HexR [Kingella denitrificans ATCC 33394]
 gi|324981822|gb|EGC17458.1| transcriptional regulator HexR [Kingella denitrificans ATCC 33394]
          Length = 287

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 42/136 (30%), Positives = 66/136 (48%), Gaps = 19/136 (13%)

Query: 66  RVVITGIGKSGHIGSKLA--------STLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           R+   G+G SG +             ST+A + T    + AA        +++  D+++V
Sbjct: 129 RIEFYGVGNSGIVAQDAQHKFFRFGISTVAYSDTHIQLMAAA--------VLSPQDVLVV 180

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SGSS E+   +  A+     +IAIT    S +A  AD VL +  + +S  +   P  
Sbjct: 181 ISNSGSSIEVLDAVRIAKENGAQVIAIT-RGGSPLAQLADCVLVMAVQEDSDRY--TPMI 237

Query: 178 SAIMQLAIGDALAIAL 193
           S ++QLAI D LAI L
Sbjct: 238 SRLLQLAIIDILAIGL 253


>gi|260775142|ref|ZP_05884040.1| transcriptional regulator RpiR family [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608843|gb|EEX35005.1| transcriptional regulator RpiR family [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 282

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 34/140 (24%), Positives = 63/140 (45%), Gaps = 2/140 (1%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           + G++ I G+G S  +   L+  L   G      + A     +   ++ +D+++ LS+SG
Sbjct: 131 LAGKIQIAGVGASSLVAKDLSYKLTKIGHAVHCEYDAHIQIANAAALSENDVLVALSYSG 190

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            S E+ +I   AR     +I I+    + +  +ADI L    + E      +  T+   Q
Sbjct: 191 RSREVLSIAQLARSKGAKVIIISQLAPTPLDRYADIKLMTAADEEQIRS--SSITARDSQ 248

Query: 183 LAIGDALAIALLESRNFSEN 202
           L + D L IAL +    ++ 
Sbjct: 249 LLMTDLLFIALTQQEESADQ 268


>gi|229819889|ref|YP_002881415.1| RpiR family transcriptional regulator [Beutenbergia cavernae DSM
           12333]
 gi|229565802|gb|ACQ79653.1| transcriptional regulator, RpiR family [Beutenbergia cavernae DSM
           12333]
          Length = 285

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 61/134 (45%), Gaps = 4/134 (2%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GR V  G+G SG   + L   L   G  +F       +     + +  D+ +  S SG++
Sbjct: 135 GRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPHDAVTAAALSSPGDVAVAFSHSGAT 194

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQL 183
            E  A L  A +     +A+T+  +S +A  ADIVL T  +E +     +A   S I QL
Sbjct: 195 REALAFLATAGKHGARTVAVTNSAESALARAADIVLVTSVRETQFRSGAMA---SRIAQL 251

Query: 184 AIGDALAIALLESR 197
            I D + + + + R
Sbjct: 252 MIVDCIFVGVAQRR 265


>gi|27468298|ref|NP_764935.1| hypothetical protein SE1380 [Staphylococcus epidermidis ATCC 12228]
 gi|57867210|ref|YP_188841.1| CBS domain-containing protein [Staphylococcus epidermidis RP62A]
 gi|251811098|ref|ZP_04825571.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875874|ref|ZP_06284741.1| DRTGG domain protein [Staphylococcus epidermidis SK135]
 gi|293366349|ref|ZP_06613028.1| CBS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315844|gb|AAO04979.1|AE016748_213 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637868|gb|AAW54656.1| CBS domain protein [Staphylococcus epidermidis RP62A]
 gi|251805395|gb|EES58052.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294899|gb|EFA87426.1| DRTGG domain protein [Staphylococcus epidermidis SK135]
 gi|291319474|gb|EFE59841.1| CBS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329724692|gb|EGG61198.1| DRTGG domain protein [Staphylococcus epidermidis VCU144]
 gi|329733797|gb|EGG70123.1| DRTGG domain protein [Staphylococcus epidermidis VCU045]
 gi|329737460|gb|EGG73714.1| DRTGG domain protein [Staphylococcus epidermidis VCU028]
          Length = 432

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 12/106 (11%)

Query: 239 LIDAITILSEKRFGC------VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           L D++TI   K+           +V+E  KL GI+T  +I     +DL    +  VM KN
Sbjct: 203 LFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTSREIINMNEEDL----LGKVMTKN 258

Query: 293 P-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  V L +T+ + A  LL    I +L V D+ +KA+G+++  D+L+
Sbjct: 259 PLSVKLTNTVASCA-HLLIWEGIELLPVTDNNKKAVGVINRQDVLK 303


>gi|256274043|gb|EEU08956.1| Imd2p [Saccharomyces cerevisiae JAY291]
          Length = 523

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVED 287
           P   +G    +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+D
Sbjct: 130 PTTTVG----EAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQD 182

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM KNP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 183 VMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|170718706|ref|YP_001783897.1| DNA-binding transcriptional repressor RpiR [Haemophilus somnus
           2336]
 gi|168826835|gb|ACA32206.1| transcriptional regulator, RpiR family [Haemophilus somnus 2336]
          Length = 283

 Score = 39.7 bits (91), Expect = 0.70,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 52/89 (58%), Gaps = 2/89 (2%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            ++T +D+I+V+S SG + +L  ++Y A++    +I IT  + S +A  +D V+  P  P
Sbjct: 174 SLLTENDVILVVSHSGKTTDLLKVVYEAKQNGAKIICITHSDISPIAVISDFVICTP-AP 232

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           ++   G    ++ I+QL + DA  +++ +
Sbjct: 233 DTPLLG-KNASARILQLILVDAFFVSVAQ 260


>gi|226306883|ref|YP_002766843.1| hypothetical protein RER_33960 [Rhodococcus erythropolis PR4]
 gi|226186000|dbj|BAH34104.1| hypothetical protein RER_33960 [Rhodococcus erythropolis PR4]
          Length = 192

 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 11/95 (11%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--------LSVEDVMIKNPKVILEDTLL 302
           F  + VVDE ++L GI++EGD+ R+  + L+          SV DVM +    + ED ++
Sbjct: 32  FSALPVVDEQKRLVGIVSEGDLLRSGFERLSQEHATESTEQSVADVMTQPVVAMTEDVVV 91

Query: 303 T-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +A ++LR    +V +V +  +  IG+V   DL+
Sbjct: 92  NDIASEMLRSGLRAVPIVRE--RDVIGVVTRQDLI 124


>gi|157371896|ref|YP_001479885.1| N-acetylmuramic acid-6-phosphate etherase [Serratia proteamaculans
           568]
 gi|167017328|sp|A8GI17|MURQ_SERP5 RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|157323660|gb|ABV42757.1| glucokinase regulatory-like protein [Serratia proteamaculans 568]
          Length = 297

 Score = 39.7 bits (91), Expect = 0.71,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 51/126 (40%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   AS    T             G P   + A E +  D  +   
Sbjct: 63  GRLIYLGAGTSGRLGVLDASECPPTFGVPHGMVIGLIAGGPGALLKAVEGAEDDAALGEA 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  D+++ L+ SG +  +   L YAR+   P  AI+    S +A    + ++ 
Sbjct: 123 DLVALDLTATDMVVGLAASGRTPYVIGALRYARQLGCPTAAISCNPDSPIAHEVQVAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|330820198|ref|YP_004349060.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
 gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
          Length = 153

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           +G ++  +     + DA+ +++ K  G + VV EG+ + GI+TE D  R      +    
Sbjct: 15  AGQTVHTIGKNDSVYDALKLMAIKGIGAL-VVKEGEDIVGIVTERDYARKVVLLERSSKD 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +E++M    + +         M L+ +H +  L V+D  +K IG++   DL++
Sbjct: 74  TRIEEIMTVKVRYVEPSETSDQCMALMTEHRMRHLPVLDKNRKLIGVISIGDLVK 128


>gi|163852356|ref|YP_001640399.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium extorquens
           PA1]
 gi|218531116|ref|YP_002421932.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           chloromethanicum CM4]
 gi|240139693|ref|YP_002964170.1| IMP dehydrogeanse [Methylobacterium extorquens AM1]
 gi|254562103|ref|YP_003069198.1| IMP dehydrogenase [Methylobacterium extorquens DM4]
 gi|163663961|gb|ABY31328.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium extorquens
           PA1]
 gi|218523419|gb|ACK84004.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           chloromethanicum CM4]
 gi|240009667|gb|ACS40893.1| IMP dehydrogeanse [Methylobacterium extorquens AM1]
 gi|254269381|emb|CAX25347.1| IMP dehydrogeanse [Methylobacterium extorquens DM4]
          Length = 496

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDI--FRNFHKDLNTLSVEDVMIK 291
           L DA  ++   R   + VV+ G      KL GI+T  D+    N  + +  L   D +I 
Sbjct: 110 LADAFEVMKRNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNAGQPVAELMTRDRLIT 169

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +D     A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 170 VREGVTQDE----AKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|16081357|ref|NP_393685.1| hypothetical protein Ta0207 [Thermoplasma acidophilum DSM 1728]
 gi|10639351|emb|CAC11353.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 278

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 37/57 (64%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +S +++M+KNP V+  +  L+ A +L+ ++N + L V+DD     G+++ +++L
Sbjct: 218 LPKISADEIMVKNPTVVYANDKLSTAAELMIKYNYNQLPVLDDSHGIYGMLYDIEML 274


>gi|18405453|ref|NP_564698.1| CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride
           channel [Arabidopsis thaliana]
 gi|41688504|sp|Q8RXR2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f
 gi|14039802|gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana]
 gi|13619402|emb|CAC36386.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195154|gb|AEE33275.1| chloride channel protein CLC-f [Arabidopsis thaliana]
          Length = 781

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE 286
           V  G  L +A  IL E    C+ VVD+   L GI+T GDI R          D NT  V 
Sbjct: 628 VSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYLSNNASTILDENTCPVS 687

Query: 287 DVMIKNPK---------VILEDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGI 329
            V  K                D  + VA +L+    +  L VV   +        K +G+
Sbjct: 688 SVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGL 747

Query: 330 VHFLDLLRF 338
           +H+  +  F
Sbjct: 748 LHYDSIWTF 756


>gi|114566624|ref|YP_753778.1| hypothetical protein Swol_1097 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337559|gb|ABI68407.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 222

 Score = 39.7 bits (91), Expect = 0.72,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 21/111 (18%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIIT--------EGDIFRN----------FHKDLNTLSVE 286
           ++ EK    V V+D G KL GIIT        E D+ R+            + L+ L V 
Sbjct: 26  LMQEKSLQRVPVLDRG-KLIGIITRRDFNARPELDLKRSSLATRFFPEEMEQKLSKLRVR 84

Query: 287 DVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D++  N ++I   +D  +  A +LLR + IS L V+DD  + +GI+   DL
Sbjct: 85  DIIPLNQQLITIHQDAFIEQAAKLLRDNRISGLPVIDDEGRMVGIITQSDL 135


>gi|332971214|gb|EGK10177.1| inosine-5'-monophosphate dehydrogenase [Desmospora sp. 8437]
          Length = 485

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA +++S+ R   V +VD  +KL GI+T  D+   R++   ++ +   D ++  P     
Sbjct: 110 DAESLMSKFRISGVPIVDRDRKLVGILTNRDLRFVRDYSIPISAVMTRDNLVTAPV---- 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T LT A ++L++H I  L +VD      G++   D+
Sbjct: 166 GTTLTDAEEVLQKHKIEKLPLVDGEGVLKGLITIKDI 202


>gi|295097344|emb|CBK86434.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 274

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 66/139 (47%), Gaps = 7/139 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++ L++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKETLVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +D+ L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKRGVKVLALSNTPRSPLASLSDLQLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALLESRNFSENDFY 205
             L + LL +   + +  Y
Sbjct: 240 VMLLVELLTTSLIAVDSHY 258


>gi|262190544|ref|ZP_06048787.1| helix-turn-helix protein RpiR [Vibrio cholerae CT 5369-93]
 gi|262033584|gb|EEY52079.1| helix-turn-helix protein RpiR [Vibrio cholerae CT 5369-93]
          Length = 281

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-----TPSFFVHAAEASHGDLGM 108
            CA + +KA   ++ + GIG S  + + +   L   G        + +   +AS     +
Sbjct: 125 QCAQQLLKA--NKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQAS-----L 177

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  DD+++V+S  G++ E+   +  A++    +IA+T   +  VA  AD V+      E 
Sbjct: 178 LKADDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEH 237

Query: 169 CPHGLAPTTSAIMQLAIGD 187
              G+   T  ++Q+A  D
Sbjct: 238 SQLGM--VTPQLLQMAAFD 254


>gi|268592217|ref|ZP_06126438.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291312265|gb|EFE52718.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 286

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 5/147 (3%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   VE+I   + RV I GIG SG     L+  L   G  +               +  
Sbjct: 124 QFERIVERIDQSQ-RVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTLNT 182

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCP 170
            D+ IV+S++G   ++      AR+    +IAIT +  S +   AD VL ++ +E E   
Sbjct: 183 HDVQIVISFTGRRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEWRS 242

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESR 197
             ++  T+   Q  + D + +ALL+ R
Sbjct: 243 SSISSRTA---QNTLTDLIFMALLQRR 266


>gi|17544849|ref|NP_518251.1| hypothetical protein RSc0130 [Ralstonia solanacearum GMI1000]
 gi|17427138|emb|CAD13658.1| putative cbs-domain-containing membrane transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 378

 Score = 39.7 bits (91), Expect = 0.73,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R FH    TL+  D+M   P V+      +V  A++LL++H +  L V+DD ++ IGIV 
Sbjct: 230 RTFH----TLTCADIM--TPSVVTASAATSVPHALRLLQRHGVKALPVIDDGRRLIGIVT 283

Query: 332 FLDL 335
             DL
Sbjct: 284 RADL 287


>gi|313206960|ref|YP_004046137.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           DSM 15868]
 gi|312446276|gb|ADQ82631.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           DSM 15868]
 gi|315024036|gb|EFT37038.1| Inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           RA-YM]
 gi|325335603|gb|ADZ11877.1| IMP dehydrogenase/GMP reductase [Riemerella anatipestifer RA-GD]
          Length = 486

 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  ++S  +   + VVD    L GIIT  D+   + ++L+ + VE++M K+  V  +
Sbjct: 109 LREAKELMSRYKISGLPVVDNNNTLIGIITNRDV--KYQENLD-MKVEELMTKDNLVTSD 165

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +T L  A  +L ++ +  L +VD+  K +G++   D+
Sbjct: 166 KNTTLETAKNILLENRVEKLPIVDENFKLVGLITIKDI 203


>gi|251771883|gb|EES52457.1| inosine-5'-monophosphate dehydrogenase [Leptospirillum
           ferrodiazotrophum]
          Length = 489

 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 7/96 (7%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMI-KNPKVILED 299
           A+ I+   R   + VV + +KLKGI+T  D+ F   H    T  V +VM  KN       
Sbjct: 110 ALEIMQTYRISGIPVVKD-KKLKGIVTNRDLRFETIH----TRKVSEVMTSKNLITAPVG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A +L ++H+I  L VV+D  +  G++   D+
Sbjct: 165 TTLDAAKRLFQEHHIEKLPVVNDKNELDGLITIKDI 200


>gi|151944202|gb|EDN62491.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 523

 Score = 39.7 bits (91), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           +A ++  +  F    V ++G+   KL G+IT  DI   F +D N++ V+DVM KNP    
Sbjct: 136 EAKSMKEKYGFAGFPVTEDGKRNAKLVGVITSRDI--QFVED-NSVLVQDVMTKNPVTGA 192

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 193 QGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|294617413|ref|ZP_06697047.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1679]
 gi|291596319|gb|EFF27578.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1679]
          Length = 601

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEKLTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + + F
Sbjct: 408 LTLLAKAIGDKKEF 421


>gi|108757573|ref|YP_628289.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108461453|gb|ABF86638.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 145

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           L DA   + E   G + V D G +L GIIT+ DI        KD N+ +V + M    + 
Sbjct: 22  LKDAALKMRELSVGPLPVCD-GDRLMGIITDRDIVVRAVSQGKDPNSTTVAEAMTGQLEY 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +D  ++V  + +++  +  ++ +D  +K +GIV   DLL
Sbjct: 81  AFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDLL 121


>gi|323345900|gb|EGA80234.1| Imd2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 456

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)

Query: 251 FGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           F    V  +G+   KL G+IT  DI   F +D N+L V+DVM KNP    +   L+   +
Sbjct: 146 FAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITLSEGNE 202

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L++     L+VVD+    + ++   DL++
Sbjct: 203 ILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|229552854|ref|ZP_04441579.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|258540535|ref|YP_003175034.1| CBS domain-containing protein [Lactobacillus rhamnosus Lc 705]
 gi|229313836|gb|EEN79809.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|257152211|emb|CAR91183.1| CBS domain protein [Lactobacillus rhamnosus Lc 705]
          Length = 185

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 68  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 127

Query: 292 NPKV--ILEDTLLTVAMQLLRQHNISVLMVV 320
            P V  +  DT +  A +LL +HN+  L V+
Sbjct: 128 MPNVVTVTADTTIMAASKLLLKHNVDSLPVI 158


>gi|257066598|ref|YP_003152854.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii DSM
           20548]
 gi|256798478|gb|ACV29133.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii DSM
           20548]
          Length = 483

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-L 297
           L DA+ I+   +   V +VD+   LKGI+T  D+   F +D N L ++ +M K   V+  
Sbjct: 105 LQDALDIMKNYKISGVPIVDKDMYLKGILTNRDV--RFVEDPN-LVIDSIMTKENLVVGY 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E   +  A+ L+ +  I  L +VD+  K  G++   D+ +
Sbjct: 162 EGIKMKEAIGLMEESKIEKLPIVDEDYKLKGLITIKDIEK 201


>gi|227555643|ref|ZP_03985690.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis HH22]
 gi|307268872|ref|ZP_07550237.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4248]
 gi|307273947|ref|ZP_07555157.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0855]
 gi|307283996|ref|ZP_07564166.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0860]
 gi|312979501|ref|ZP_07791183.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           516]
 gi|227175220|gb|EEI56192.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis HH22]
 gi|306503367|gb|EFM72616.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0860]
 gi|306509255|gb|EFM78315.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0855]
 gi|306514788|gb|EFM83338.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4248]
 gi|311287683|gb|EFQ66239.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           516]
 gi|315148284|gb|EFT92300.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4244]
 gi|315151249|gb|EFT95265.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0012]
 gi|315153734|gb|EFT97750.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0031]
 gi|315158671|gb|EFU02688.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0312]
 gi|315163394|gb|EFU07411.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0645]
 gi|327536391|gb|AEA95225.1| IMP dehydrogenase [Enterococcus faecalis OG1RF]
          Length = 497

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S  R   V +V+  E +KL GIIT  D+   F  D   + +E+VM K+  V   
Sbjct: 116 DAEELMSRYRISGVPIVETMENRKLVGIITNRDM--RFVTDYQ-IKIEEVMTKDHLVTAP 172

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 173 VGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDI 210


>gi|212224081|ref|YP_002307317.1| hypothetical protein TON_0932 [Thermococcus onnurineus NA1]
 gi|212009038|gb|ACJ16420.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 181

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           ILS  + G   VV + + + GIIT+ DI        +D   + VE+VM KNP  I +D  
Sbjct: 30  ILSRNKVGSAVVVKDDE-IVGIITDRDILDKVVAKGRDPKDVKVEEVMTKNPVTIEDDYE 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+  +    I  L+V     K IG V   DLL
Sbjct: 89  VQDAIDRMMDKGIRRLLVT-RLGKPIGFVTAADLL 122


>gi|238789724|ref|ZP_04633507.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
 gi|238722277|gb|EEQ13934.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
          Length = 245

 Score = 39.7 bits (91), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDMAAAQIAATR-RVIFVGIGTSGALGKYSARFFSNIGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVAC 154
             +  +     + +D + I+LS SG ++E+  I   A +FS+    +I++T+ + S +A 
Sbjct: 145 --DPYYPINSDMYQDAIAIILSVSGETEEIIRI---ANQFSLHNCKIISLTNSDNSTLAK 199

Query: 155 HADIVLTLPKEP 166
            AD+ ++    P
Sbjct: 200 MADLNISYHMPP 211


>gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           H04402 065]
          Length = 138

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIKNPKVILED 299
           A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N + V D+M  NP V  +D
Sbjct: 23  AAQLMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANKD 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A +++ +  I  L  V+D Q  +GIV   D+
Sbjct: 82  MDIHDAARIMSERQIRRL-PVEDNQNIVGIVSLGDI 116


>gi|293375744|ref|ZP_06622015.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325841748|ref|ZP_08167442.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|292645613|gb|EFF63652.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325489867|gb|EGC92218.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 241

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 2/88 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +++  GIG SG +G   A   ++ G  S+F+   +  + ++G I+ D ++I+LS SG ++
Sbjct: 113 QIIFVGIGTSGILGKYGARYFSNIGKFSYFID--DPFYPNIGGISDDAVVIMLSVSGETE 170

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVA 153
           +   +  +  +    L++IT+   S +A
Sbjct: 171 QTLNLARFFLQQRCTLVSITNSTNSTLA 198


>gi|293568088|ref|ZP_06679425.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1071]
 gi|291589170|gb|EFF20981.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1071]
          Length = 601

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEKLTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + + F
Sbjct: 408 LTLLAKAIGDKKEF 421


>gi|28572253|ref|NP_789033.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei
           TW08/27]
 gi|28410384|emb|CAD66770.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei
           TW08/27]
          Length = 491

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VA 305
           S  +     VVDE   L GI+T  D++   H+   ++ V +VM ++P +     + +  A
Sbjct: 116 SRYKISGFPVVDEDNTLLGIVTSRDMWPYRHEHRASVRVSEVMTRSPLITASPNISSEEA 175

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             LL +H +  L +VD+  +  G++   D +
Sbjct: 176 RDLLYKHRLEKLPLVDEHGRLFGLITVKDFV 206


>gi|261212571|ref|ZP_05926856.1| helix-turn-helix protein RpiR [Vibrio sp. RC341]
 gi|260838502|gb|EEX65158.1| helix-turn-helix protein RpiR [Vibrio sp. RC341]
          Length = 281

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 33/139 (23%), Positives = 64/139 (46%), Gaps = 14/139 (10%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-----TPSFFVHAAEASHGDLGM 108
            CA + +KA   ++ + GIG S  + + +   L   G        + +   +AS     +
Sbjct: 125 QCAQQLLKA--NKIALAGIGASAIVAADINHKLIRAGFNVQFNQDYHIQIVQAS-----L 177

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  DD+++V+S  G++ E+   +  A++    +IA+T   +  VA  AD V+      E 
Sbjct: 178 LKADDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLADYVIPYSYTEEH 237

Query: 169 CPHGLAPTTSAIMQLAIGD 187
              G+   T  ++Q+A  D
Sbjct: 238 SQLGM--VTPQLLQMAAFD 254


>gi|69245970|ref|ZP_00603742.1| Glucosamine-fructose-6-phosphate aminotransferase, isomerising
           [Enterococcus faecium DO]
 gi|257882897|ref|ZP_05662550.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,502]
 gi|257889325|ref|ZP_05668978.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,410]
 gi|257894338|ref|ZP_05673991.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,408]
 gi|258616000|ref|ZP_05713770.1| glucosamine--fructose-6-phosphate aminotransferase [Enterococcus
           faecium DO]
 gi|260560064|ref|ZP_05832242.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium C68]
 gi|261207447|ref|ZP_05922133.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium TC 6]
 gi|289565858|ref|ZP_06446299.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium D344SRF]
 gi|293559809|ref|ZP_06676327.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1162]
 gi|294623412|ref|ZP_06702268.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           U0317]
 gi|68195500|gb|EAN09944.1| Glucosamine-fructose-6-phosphate aminotransferase, isomerising
           [Enterococcus faecium DO]
 gi|257818555|gb|EEV45883.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,502]
 gi|257825685|gb|EEV52311.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,410]
 gi|257830717|gb|EEV57324.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,408]
 gi|260073899|gb|EEW62223.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium C68]
 gi|260078338|gb|EEW66043.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium TC 6]
 gi|289162318|gb|EFD10177.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium D344SRF]
 gi|291597178|gb|EFF28373.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           U0317]
 gi|291606228|gb|EFF35644.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1162]
          Length = 601

 Score = 39.7 bits (91), Expect = 0.76,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEKLTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + + F
Sbjct: 408 LTLLAKAIGDKKEF 421


>gi|160334181|gb|ABX24505.1| putative transport protein [Streptomyces cacaoi subsp. asoensis]
          Length = 267

 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 19/113 (16%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM--------------- 289
           +L+E     V VV++ +++ G+++E D+ R     L+   +  V+               
Sbjct: 63  LLAEHDITAVPVVNDEERVMGVVSEADLLRKEAAQLDPAGLLPVLHPGPADRAKAEATTA 122

Query: 290 ---IKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +P V        V A Q++ +H +  L VVD+  + +G++   DLLR 
Sbjct: 123 AGLMHSPAVTAGPQWTAVEAAQVMERHRVKRLPVVDEAGRLVGLISRADLLRV 175


>gi|188996704|ref|YP_001930955.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931771|gb|ACD66401.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 156

 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           P+V     L D I+ ++E   G V +V+ G   KGI+TE D+ + F  ++ +L+   +  
Sbjct: 14  PVVSFDLTLKDVISKMAEYNRGFVILVNNGSP-KGILTERDVNKLFSLNV-SLNEPAINF 71

Query: 291 KNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            N  ++     +++   + L+ ++NI  L++V D  K +G V   D+LR
Sbjct: 72  ANKNIVTAKPNISIYYGIDLMLENNIRRLVLVSDDGKYVGTVTVDDILR 120


>gi|29831543|ref|NP_826177.1| inosine-5'-monophosphate dehydrogenase [Streptomyces avermitilis
           MA-4680]
 gi|29608659|dbj|BAC72712.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           avermitilis MA-4680]
          Length = 502

 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADAICAKFRISGVPVTDGNGKLLGIVTNRDMA--FETD-RSRQVREVMTPMPLVTGK 170

Query: 299 DTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    AMQLLR+H I  L +VDD     G++   D  +
Sbjct: 171 VGISGNDAMQLLRRHKIEKLPLVDDAGILKGLITVKDFTK 210


>gi|83954348|ref|ZP_00963068.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
 gi|83841385|gb|EAP80555.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
          Length = 144

 Score = 39.3 bits (90), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           DS+  VK G  +  A  +LSEKR G + V  +G+   GI++E DI R   ++
Sbjct: 13  DSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGRE 64


>gi|323516146|gb|ADX90527.1| hypothetical protein ABTW07_0088 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 344

 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 37/116 (31%), Positives = 56/116 (48%), Gaps = 12/116 (10%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT- 282
           MH  DSI         + A+ +L       V VVD+   L G IT+GDI R   K  +  
Sbjct: 1   MHKNDSI---------LKALELLDLYALRIVLVVDDHNHLIGSITDGDIRRGLLKGQDVH 51

Query: 283 LSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            SVE +M  NP  I E +L    + +++R+ +   L V+ + Q  + I+   DL+R
Sbjct: 52  ASVETIMHTNPYSIEEGSLNNRQIFEIMREKSYLALPVIKNNQ-LVNIITLDDLIR 106


>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
 gi|170761474|ref|YP_001785527.1| CBS domain-containing protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
 gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
 gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
 gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 138

 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIKNPKVILED 299
           A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N + V D+M  NP V  +D
Sbjct: 23  AAELMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANKD 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A +++ +  I  L  V+D Q  +GIV   D+
Sbjct: 82  MDIHDAARIMSERQIRRL-PVEDNQNIVGIVSLGDI 116


>gi|148378202|ref|YP_001252743.1| CBS domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153930979|ref|YP_001382603.1| CBS domain-containing protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153936233|ref|YP_001386155.1| CBS domain-containing protein [Clostridium botulinum A str. Hall]
 gi|153940514|ref|YP_001389562.1| CBS domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|170756627|ref|YP_001779830.1| CBS domain-containing protein [Clostridium botulinum B1 str. Okra]
 gi|226947420|ref|YP_002802511.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
           3502]
 gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
 gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
 gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
 gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
          Length = 138

 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIKNPKVILED 299
           A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N + V D+M  NP V  +D
Sbjct: 23  AAQLMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNIKVGDIMTSNPVVANKD 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A +++ +  I  L  V+D Q  +GIV   D+
Sbjct: 82  MDIHDAARIMSERQIRRL-PVEDNQNIVGIVSLGDI 116


>gi|83943213|ref|ZP_00955673.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
 gi|83846221|gb|EAP84098.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
          Length = 144

 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           DS+  VK G  +  A  +LSEKR G + V  +G+   GI++E DI R   ++
Sbjct: 13  DSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGRE 64


>gi|189499096|ref|YP_001958566.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           phaeobacteroides BS1]
 gi|189494537|gb|ACE03085.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Chlorobium phaeobacteroides BS1]
          Length = 615

 Score = 39.3 bits (90), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           RV+I   G S H   IG  L    A    P    +A+E  + +  +ITRDD++IV+S SG
Sbjct: 302 RVIICACGTSWHAGLIGEYLIEEFARI--PVEVDYASEFRYRN-PVITRDDVVIVISQSG 358

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +  A L  AR     ++ I +   S +A      +     PE    G+A T +   Q
Sbjct: 359 ETADTLAALRLAREKGALVMGICNVVGSTIARETLCGIYTHAGPEV---GVASTKAFTAQ 415

Query: 183 LAIGDALAIALLESRNFSENDF 204
           + +   LA+ L + R  S N+ 
Sbjct: 416 VTVLYLLALTLGKGRTMSRNEL 437


>gi|307720713|ref|YP_003891853.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978806|gb|ADN08841.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica
           DSM 16294]
          Length = 481

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++ E +   V VVD   KL GI+T  D+   F K++   S E+VM K P +  +
Sbjct: 105 LADAEALMKEFKISGVPVVDGHNKLLGILTNRDM--RFEKNMRK-SAEEVMTKMPLITAK 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  ++ Q+ I  L ++D+     G+V   D+ +
Sbjct: 162 KGISLDEAADIMHQNKIEKLPIIDNEGFLKGLVTIKDIKK 201


>gi|290955614|ref|YP_003486796.1| hypothetical protein SCAB_10531 [Streptomyces scabiei 87.22]
 gi|260645140|emb|CBG68226.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 233

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 19/113 (16%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM--------------- 289
           +L+E     V VVD+  +  G+++E D+ R     L+   +  V+               
Sbjct: 29  LLAEYDITAVPVVDDDDRPVGVVSEADLLRKEAAQLDPAGLLPVLHPKPAARAKAEAATA 88

Query: 290 ---IKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +P V  +     V A Q++ +H +  L VVD+  + +G++   DLLR 
Sbjct: 89  EGLMNSPAVTAQPQWTVVEAAQVMERHRVKRLPVVDEAGRLVGLISRADLLRV 141


>gi|229916408|ref|YP_002885054.1| signal transduction protein with CBS and DRTGG domains
           [Exiguobacterium sp. AT1b]
 gi|229467837|gb|ACQ69609.1| putative signal transduction protein with CBS and DRTGG domains
           [Exiguobacterium sp. AT1b]
          Length = 436

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+DE  K+ G+IT  D+    H       +E VM K+P  +   T +T A   +    I 
Sbjct: 227 VIDEQMKVVGVITAKDVIDKSHD----YDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           +L VVD+  + +GI+   D+L+
Sbjct: 283 MLPVVDNYGRLLGIISRQDVLK 304


>gi|28493042|ref|NP_787203.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei str.
           Twist]
 gi|28476082|gb|AAO44172.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei str.
           Twist]
          Length = 491

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 1/91 (1%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VA 305
           S  +     VVDE   L GI+T  D++   H+   ++ V +VM ++P +     + +  A
Sbjct: 116 SRYKISGFPVVDEDNTLLGIVTSRDMWPYRHEHRASVRVSEVMTRSPLITASPNISSEEA 175

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             LL +H +  L +VD+  +  G++   D +
Sbjct: 176 RDLLYKHRLEKLPLVDEHGRLFGLITVKDFV 206


>gi|15616138|ref|NP_244443.1| transcriptional regulator (hex regulon repressor) [Bacillus
           halodurans C-125]
 gi|10176200|dbj|BAB07295.1| transcriptional regulator (hex regulon repressor) [Bacillus
           halodurans C-125]
          Length = 284

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK- 164
           + M+   D++I +S SG++ E+  I  YA+  ++ LI IT+ ++S +   A + L +P  
Sbjct: 175 ITMMDEQDVVICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAVSLLIPDI 234

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           E +     +A  TS   QL + DAL +++ 
Sbjct: 235 EVQQRIGSIASRTS---QLNVIDALYVSVF 261


>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
 gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
          Length = 144

 Score = 39.3 bits (90), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           DA+T+LS+ R G V V  +G  L GI++E DI R   K
Sbjct: 26  DAVTLLSQNRIGTVVVSGDGVTLDGILSERDIVRELGK 63


>gi|199598507|ref|ZP_03211924.1| CBS domain containing protein [Lactobacillus rhamnosus HN001]
 gi|199590549|gb|EDY98638.1| CBS domain containing protein [Lactobacillus rhamnosus HN001]
          Length = 185

 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 68  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 127

Query: 292 NPKV--ILEDTLLTVAMQLLRQHNISVLMVV 320
            P V  +  DT +  A +LL +HN+  L V+
Sbjct: 128 MPNVVTVTADTTIMAASKLLLKHNVDSLPVI 158


>gi|188533149|ref|YP_001906946.1| N-acetylmuramic acid-6-phosphate etherase [Erwinia tasmaniensis
           Et1/99]
 gi|238689692|sp|B2VEB1|MURQ_ERWT9 RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|188028191|emb|CAO96049.1| Putative phosphosugar-binding protein [Erwinia tasmaniensis Et1/99]
          Length = 306

 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   AS    T             G P+  V + E +  D G+   
Sbjct: 63  GRLIYIGAGTSGRLGVLDASECPPTFGIPHGVVIGLIAGGPAALVTSVEGAEDDEGLGIS 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 ++ +D++I L+ SG +      L YAR+      AI+    S +A  A+I ++ 
Sbjct: 123 DLQAQNLSANDMVIGLAASGRTPYAIGALRYARQLGCRTAAISCNPHSPLALEAEIAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 LVGPEA 188


>gi|239979979|ref|ZP_04702503.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
          Length = 495

 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V V D   +L GI+T  D+   F  D  T  V +VM   P V  +
Sbjct: 107 LGEADAICAKFRISGVPVTDGSGRLLGIVTNRDMA--FESD-RTRQVREVMTPMPLVTGK 163

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 164 VGISGVDAMELLRRHKIEKLPLVDDEGVLKGLITVKDFVK 203


>gi|48478187|ref|YP_023893.1| CBS domain-containing protein [Picrophilus torridus DSM 9790]
 gi|48430835|gb|AAT43700.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
          Length = 281

 Score = 39.3 bits (90), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 10/110 (9%)

Query: 233 VKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +K   P  + D + +L +     + VVD   K  G+IT  DIF N ++    +    VM 
Sbjct: 14  IKYSVPSTISDVVRVLIKNNVTGIPVVDSNNKYAGVITRRDIFFNPNETQTAI----VMR 69

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLLR 337
           +   V  +D +   AM++++Q N   L+V+D   +  GI+   +FL ++R
Sbjct: 70  RANTVYEDDDIEKAAMEIVKQ-NRRHLIVIDKNNEVTGILTPQNFLSVVR 118


>gi|307546828|ref|YP_003899307.1| hypothetical protein HELO_4238 [Halomonas elongata DSM 2581]
 gi|307218852|emb|CBV44122.1| hypothetical protein HELO_4238 [Halomonas elongata DSM 2581]
          Length = 287

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 1/118 (0%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSSDEL 127
           + G  +S  + S +   L      +F V+     +G+ L  I  DD ++V+S+S  + E 
Sbjct: 148 VMGARRSFVVASYMTYALHHIDKRTFLVNGLGGMYGEQLKAIGDDDALLVVSFSPYAQET 207

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +   AR+  +PL+ IT  N S +A  AD+ L + +       GL  +      LAI
Sbjct: 208 REMADEARKRGVPLVVITDSNLSPLARIADVSLVVHEAEVKSFRGLTASLCLTQTLAI 265


>gi|307328619|ref|ZP_07607792.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
 gi|306885731|gb|EFN16744.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
          Length = 139

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
           A+D+MH G     +     ++ A  ++ +   G + V D  ++L GI+T+ DI       
Sbjct: 4   AADIMHPGAQ--WIPENESVLRAAQMMRDLGVGALPVSDSNERLCGIVTDRDIVVGCIAE 61

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + D +   V  +    P+ I  D  +T  ++ + +H I  L V+D  ++ +G++   DL
Sbjct: 62  NCDPSRTPVGQLTEGTPRWIPADADVTDVLREMEEHKIRRLPVIDQNKRLVGMISEADL 120


>gi|295694695|ref|YP_003587933.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912]
 gi|295410297|gb|ADG04789.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912]
          Length = 485

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 6/97 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVILE- 298
           +A  ++++ R   V +VDE  +L GIIT  D+ F   H  L    + +VM K   V    
Sbjct: 110 EAEQLMAKYRISGVPIVDEKGRLVGIITNRDLRFEQNHSRL----IAEVMTKENLVTAPV 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 166 GTTLEEAKRILQEHKIEKLPLVDDQYMLRGLITIKDI 202


>gi|255631750|gb|ACU16242.1| unknown [Glycine max]
          Length = 205

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 241 DAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           DA+  +++   G + VV  D  + + GIITE D  R      +   +  V D+M +  K+
Sbjct: 82  DAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKL 141

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I    DT +  AMQL+    I  + V+D+ +  +G+V   D++R
Sbjct: 142 ITVTPDTKVLQAMQLMTDKRIRHIPVIDE-KGMVGMVSIGDVVR 184


>gi|269928381|ref|YP_003320702.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787738|gb|ACZ39880.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus
           DSM 20745]
          Length = 511

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 4/101 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVI 296
           P+ +A+ +++      V + DE  KL GI+T  D+   F  D+N   + ++M K N   +
Sbjct: 127 PVSEALAVMAHYHISGVPITDEHGKLVGILTNRDL--RFETDVNQ-PIANLMTKENLITV 183

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++L QH I  L VVD+     G++   D+ +
Sbjct: 184 PVGTTLEQAEEILHQHKIEKLPVVDEHGYLKGLITVKDIQK 224


>gi|218886680|ref|YP_002436001.1| CBS domain containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757634|gb|ACL08533.1| CBS domain containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 217

 Score = 39.3 bits (90), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 5/49 (10%)

Query: 231 PLVKIGC--PLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFR 274
           P+V I    P+ DA  I+ ++ FGC+ V +    GQ+L GII++ D+FR
Sbjct: 84  PVVSIPAETPIEDAAMIMHDRDFGCLPVTEAAHGGQRLVGIISDNDLFR 132


>gi|153954175|ref|YP_001394940.1| hypothetical protein CKL_1550 [Clostridium kluyveri DSM 555]
 gi|219854784|ref|YP_002471906.1| hypothetical protein CKR_1441 [Clostridium kluyveri NBRC 12016]
 gi|146347056|gb|EDK33592.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568508|dbj|BAH06492.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 125

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 55/102 (53%), Gaps = 4/102 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVIL-E 298
           A+ ++ +       +VDE  +L G+I + DI+R   ++   +T  V+  M K+  V   E
Sbjct: 22  ALDMMDDHNVNGAPIVDEDGQLTGMIVKADIYRFLMEEGHYDTCPVDWAMTKDVVVAKSE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++TVA + +R++NI  + V+DD     G V   D++ + I
Sbjct: 82  EDIMTVA-KRIRENNIVAIPVIDDKNVVKGTVSIEDIMDYVI 122


>gi|300717178|ref|YP_003741981.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299063014|emb|CAX60134.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 371

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 4/106 (3%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           P  +IG    D   +L+ +  G    +DEG  L+ I+++ +  R   +    L   D M 
Sbjct: 190 PAQRIGVSREDLHAVLAAR--GEYVDIDEG-DLQAILSQAEQ-RAHRRHFGGLRCADFMT 245

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    I  D     A  LLRQH I VL VV    + +GIV   DLL
Sbjct: 246 RELWTIEPDASCHEAGSLLRQHRIDVLPVVSKAGELLGIVTSRDLL 291


>gi|296283757|ref|ZP_06861755.1| IMP dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 487

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           L +A  I+S  R   + V D G KL GI+T  D+    N  + +  L   D +   P   
Sbjct: 107 LGEAQAIMSANRISGIPVTDRGGKLVGILTNRDVRFAENPAQPIRELMTTDNLATVPLGT 166

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++     A + L Q  I  L+VVDD  + IG++   D+
Sbjct: 167 GQEE----ARRTLHQRRIEKLIVVDDEYRCIGLITVKDI 201


>gi|291451836|ref|ZP_06591226.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
 gi|291354785|gb|EFE81687.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
          Length = 502

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  I ++ R   V V D   +L GI+T  D+   F  D  T  V +VM   P V  +
Sbjct: 114 LGEADAICAKFRISGVPVTDGSGRLLGIVTNRDMA--FESD-RTRQVREVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGVDAMELLRRHKIEKLPLVDDEGVLKGLITVKDFVK 210


>gi|259148522|emb|CAY81767.1| Imd4p [Saccharomyces cerevisiae EC1118]
          Length = 524

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVE 286
           P+V      +  + ++  K  F    V ++G+   KL G++T  DI   F +D ++L V 
Sbjct: 126 PIVISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDI--QFLED-DSLVVS 182

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM KNP   ++   L    ++L+Q     L++VDD    + ++   DL++
Sbjct: 183 EVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSMLSRADLMK 233


>gi|222084506|ref|YP_002543035.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
 gi|221721954|gb|ACM25110.1| transcriptional regulator protein [Agrobacterium radiobacter K84]
          Length = 287

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I  S+SG + EL      AR   +P IA+T +++S VA  ADI +     P   P G
Sbjct: 177 DVLIGSSFSGRNAELVRAFTLAREAKVPTIALT-QSQSPVALAADITV-----PVDLPEG 230

Query: 173 ---LAPTTSAIMQLAIGDALA 190
                PT++ I  LA+ D LA
Sbjct: 231 DNIYRPTSTRIAYLAVVDILA 251


>gi|160914592|ref|ZP_02076806.1| hypothetical protein EUBDOL_00599 [Eubacterium dolichum DSM 3991]
 gi|158433132|gb|EDP11421.1| hypothetical protein EUBDOL_00599 [Eubacterium dolichum DSM 3991]
          Length = 215

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 62/125 (49%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           + +   + + + I++++    + VV  G+KL G++TE  I +              +  L
Sbjct: 14  IDVNSKISEVVDIMNDRELHRIPVV-SGKKLVGLVTESMISKQGATKATSLSIYELNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH-------FL 333
           +  SV+ +MI++   I ED  L  A  ++ +H+I  L VV+D  + +GI+        FL
Sbjct: 73  SKTSVDAIMIRDVITIHEDRFLEDAALVMFKHDIGCLPVVNDANEVVGILTSNDVLSAFL 132

Query: 334 DLLRF 338
           D+L +
Sbjct: 133 DILGY 137


>gi|86605414|ref|YP_474177.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
 gi|86553956|gb|ABC98914.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
          Length = 908

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   + VVD   +L G+I+  DI    H       V+  M  + K +  DT L    +
Sbjct: 349 RYGHSGLVVVDAQGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQR 408

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ Q +I  L V+ D Q  +GIV   D+LR
Sbjct: 409 LMVQWDIGRLPVLQDGQ-LVGIVTRTDVLR 437


>gi|109896856|ref|YP_660111.1| signal-transduction protein [Pseudoalteromonas atlantica T6c]
 gi|109699137|gb|ABG39057.1| putative signal-transduction protein with CBS domains
           [Pseudoalteromonas atlantica T6c]
          Length = 611

 Score = 39.3 bits (90), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 11/147 (7%)

Query: 197 RNFSENDFYVLH-PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           RN++    Y  H    K   L+   S+V+   D +    I   ++  + ++S+     + 
Sbjct: 126 RNYTSEQIYSDHVDDSKSMWLYKPISEVI--SDGVVSEDINSSILQGVQVMSKSGVSSLV 183

Query: 256 VVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           + D  Q L GI+T+ DI RN       D+N L+V ++M ++P  I +   L  A+ ++ +
Sbjct: 184 ITD-NQLLVGILTDRDI-RNRVVAQQTDVN-LAVSEIMTRDPVKISDQRTLFDALCVMTE 240

Query: 312 HNISVLMVVD-DCQKAIGIVHFLDLLR 337
           HN+  L VVD +    +G++   D++R
Sbjct: 241 HNVHHLPVVDKNSGVPLGMLTASDMIR 267


>gi|229079434|ref|ZP_04211975.1| RpiR family transcriptional regulator [Bacillus cereus Rock4-2]
 gi|228703891|gb|EEL56336.1| RpiR family transcriptional regulator [Bacillus cereus Rock4-2]
          Length = 284

 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KSV++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSVLSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
 gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
          Length = 201

 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 23/147 (15%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N +  D  +     K+G+   C      + DS+          DA+  +++   G + V+
Sbjct: 49  NLTVADVLMTKGEDKIGSWLWC-----RTTDSV---------YDAVENMAKNNIGSLVVL 94

Query: 258 DEGQK--LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLR 310
             G++  + GIITE D  R      +      V ++M    K++    DT +  AMQL+ 
Sbjct: 95  KPGEQELIAGIITERDYMRKIIAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMT 154

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
            H+I  + V+D   K +G+V  +D++R
Sbjct: 155 DHHIRHVPVIDG--KIVGMVSIVDVVR 179


>gi|86610318|ref|YP_479080.1| polyA polymerase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558860|gb|ABD03817.1| polyA polymerase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 908

 Score = 39.3 bits (90), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   + VVD   +L G+I+  DI    H       V+  M  + K +  DT L    +
Sbjct: 349 RYGHSGLVVVDAQGRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQR 408

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ Q +I  L V+ D Q  +GIV   D+LR
Sbjct: 409 LMVQWDIGRLPVLQDGQ-LVGIVTRTDVLR 437


>gi|332710747|ref|ZP_08430688.1| tRNA nucleotidyltransferase/poly(A)
           polymerase/CBS-domain-containing membrane protein
           [Lyngbya majuscula 3L]
 gi|332350524|gb|EGJ30123.1| tRNA nucleotidyltransferase/poly(A)
           polymerase/CBS-domain-containing membrane protein
           [Lyngbya majuscula 3L]
          Length = 688

 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+M S   +  ++    + +A  IL       ++VVD+  +L GII+  D+    H
Sbjct: 95  LTARDLMSS--PVRTIRPNTKIKEAQRILLRYGHSGLSVVDQQDQLVGIISRRDLDLALH 152

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+  M K+ K I  +T +     L+  ++I  L V++D Q  +GIV   D+LR
Sbjct: 153 HGFGHAPVKGYMTKHIKTITPETSMADIQSLMVTYDIGRLPVLEDGQ-LMGIVTRTDVLR 211


>gi|319936961|ref|ZP_08011371.1| hypothetical protein HMPREF9488_02205 [Coprobacillus sp. 29_1]
 gi|319807897|gb|EFW04476.1| hypothetical protein HMPREF9488_02205 [Coprobacillus sp. 29_1]
          Length = 262

 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 4/95 (4%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL--GMITRDDLIIVLSWSGSSDELK 128
           GIG S    ++L  +L S     FF    +    D     +T+D L+I+ S +GSS+   
Sbjct: 131 GIGNSAFCANQLVYSLYSHN--KFFDAVVDDVQFDYLSNCLTQDYLLIIFSVTGSSNTFS 188

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            +L  A+     ++ I+  N S +  +ADI   LP
Sbjct: 189 KLLKAAKNAGSKIVIISMNNDSPINHYADIQFILP 223


>gi|313610555|gb|EFR85676.1| SIS domain-containing protein [Listeria monocytogenes FSL F2-208]
          Length = 92

 Score = 39.3 bits (90), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           VE I    G++V+ G G SG    KL  +      P+ F+  ++A HG LG++ ++
Sbjct: 37  VETIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKE 92


>gi|154251622|ref|YP_001412446.1| inosine-5'-monophosphate dehydrogenase [Parvibaculum
           lavamentivorans DS-1]
 gi|154155572|gb|ABS62789.1| inosine-5'-monophosphate dehydrogenase [Parvibaculum
           lavamentivorans DS-1]
          Length = 486

 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++       + VV++  KL GI+T  D+   F  ++    V ++M K   V +E
Sbjct: 103 LADAFALMEHHGITGIPVVEQSGKLAGILTNRDV--RFATNM-LEPVRNLMTKENLVTVE 159

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D +    A +LL +H I  L+VVD+    +G++   D+
Sbjct: 160 DGVSQDDAKRLLHKHRIEKLLVVDEAYHCVGLITVKDI 197


>gi|30695978|ref|NP_849813.1| CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride
           channel [Arabidopsis thaliana]
 gi|332195153|gb|AEE33274.1| chloride channel protein CLC-f [Arabidopsis thaliana]
          Length = 585

 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE 286
           V  G  L +A  IL E    C+ VVD+   L GI+T GDI R          D NT  V 
Sbjct: 432 VSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRYLSNNASTILDENTCPVS 491

Query: 287 DVMIKNPK---------VILEDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGI 329
            V  K                D  + VA +L+    +  L VV   +        K +G+
Sbjct: 492 SVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGL 551

Query: 330 VHFLDLLRF 338
           +H+  +  F
Sbjct: 552 LHYDSIWTF 560


>gi|6323585|ref|NP_013656.1| Imd4p [Saccharomyces cerevisiae S288c]
 gi|1708478|sp|P50094|IMDH4_YEAST RecName: Full=Probable inosine-5'-monophosphate dehydrogenase IMD4;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|577140|emb|CAA86719.1| putative inosine-5'-monophoshate dehydrogenase [Saccharomyces
           cerevisiae]
 gi|285813947|tpg|DAA09842.1| TPA: Imd4p [Saccharomyces cerevisiae S288c]
          Length = 524

 Score = 39.3 bits (90), Expect = 0.84,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVE 286
           P+V      +  + ++  K  F    V ++G+   KL G++T  DI   F +D ++L V 
Sbjct: 126 PIVISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDI--QFLED-DSLVVS 182

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM KNP   ++   L    ++L+Q     L++VDD    + ++   DL++
Sbjct: 183 EVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSMLSRADLMK 233


>gi|312136464|ref|YP_004003801.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224183|gb|ADP77039.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 188

 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 54/99 (54%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL--NTLSVEDVMIKNPKVIL 297
           +A  I+S+KR G + + D    + G++TE DI R    KDL  + + V ++M KN   I 
Sbjct: 28  EAAAIMSKKRVGSIIIKDNSGPI-GLVTESDIIRKVVAKDLKASEVKVSEIMTKNLITIE 86

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ +  A  L+ ++NI  L VV +    +GI+   D++
Sbjct: 87  PESEIREAAHLMAKNNIRRLPVVKNGV-LVGIITSTDIM 124


>gi|240102787|ref|YP_002959096.1| hypothetical protein TGAM_0730 [Thermococcus gammatolerans EJ3]
 gi|239910341|gb|ACS33232.1| Conserved hypothetical protein, Inosine-5'P dehydrogenase related
           protein [Thermococcus gammatolerans EJ3]
          Length = 390

 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 44/161 (27%), Positives = 72/161 (44%), Gaps = 30/161 (18%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLE    SE DF      GK         DV+        +K    +  A+  + +  
Sbjct: 116 IALLE--RVSEGDF------GKRKVEEFMTKDVIT-------LKPDDTVAKALATMRDYA 160

Query: 251 FGCVAVVDEGQKLKGIITEGDI--------FRNFHKDLN-------TLSVEDVMIKNPKV 295
              + +VDE  +L+G++T  D+        FR    +L        ++ + DVMIK    
Sbjct: 161 ISRIPIVDEEGRLEGLVTLHDLIIRFIKPRFRAQAGELAGEKIPPFSMPLRDVMIKGVIT 220

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           IL D  +  A+  +R ++I  L+VV++  K +G++   DLL
Sbjct: 221 ILPDAKVREAVATMRDNDIDGLIVVNEDNKVVGVLTVKDLL 261


>gi|239905548|ref|YP_002952287.1| putative acetoin utilization protein [Desulfovibrio magneticus
           RS-1]
 gi|239795412|dbj|BAH74401.1| putative acetoin utilization protein [Desulfovibrio magneticus
           RS-1]
          Length = 219

 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 53/106 (50%), Gaps = 12/106 (11%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-------IFRNFHKD-----LNTLS 284
            P++DA  +L+   F  + VVD+ +KL G + + D       I     K      L+ L+
Sbjct: 18  TPVLDADKLLTGSDFWMLLVVDDDRKLLGYVRKEDIALALPSIMTTLEKHEALYLLSKLT 77

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           V+ +M K+   +  +  +  A +++ Q N++ L VV D QK +G +
Sbjct: 78  VQKIMRKDIIAVHPEMEIEQAAEIMHQKNLAGLAVVGDQQKLVGYI 123


>gi|157144504|ref|YP_001451823.1| N-acetylmuramic acid-6-phosphate etherase [Citrobacter koseri ATCC
           BAA-895]
 gi|157081709|gb|ABV11387.1| hypothetical protein CKO_00222 [Citrobacter koseri ATCC BAA-895]
          Length = 282

 Score = 39.3 bits (90), Expect = 0.85,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   AS    T             G P   + A E +     +   
Sbjct: 48  GRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVIGLIAGGPGALLKAVEGAEDSQQLGED 107

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  DL++ L+ SG +  +   L YAR+     +AI+    S +A  ADI ++ 
Sbjct: 108 DLLALNVTAQDLVVGLAASGRTPYVIGGLKYARQVGCVTVAISCNPDSPIAREADIAISP 167

Query: 163 PKEPES 168
              PE+
Sbjct: 168 VVGPEA 173


>gi|270262600|ref|ZP_06190871.1| hypothetical protein SOD_c02200 [Serratia odorifera 4Rx13]
 gi|270043284|gb|EFA16377.1| hypothetical protein SOD_c02200 [Serratia odorifera 4Rx13]
          Length = 295

 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 1/104 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V + GI  SG +           G P+  ++ A  +  + L  + R D++I+++   + 
Sbjct: 144 QVALFGINASGILADYSTRLFNRIGIPAVSLNRAGIALAEQLISLQRGDVLIMMAQKSAH 203

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
            E +  L  A+R  IP+I +T+ + S  A  A +V+ +P+  E+
Sbjct: 204 REGRTTLREAKRLGIPIILLTNASDSFFAGEAHVVINVPRGGEN 247


>gi|269796191|ref|YP_003315646.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
 gi|269098376|gb|ACZ22812.1| transcriptional regulator [Sanguibacter keddieii DSM 10542]
          Length = 290

 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRV++TG G S  + + LA  L + G P+  V            +T  DL +V+S SG+S
Sbjct: 138 GRVLVTGNGLSSPLAADLALRLTAVGRPTECVADPIGQQIAAAQLTSADLCLVVSGSGAS 197

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           +    +    R   + ++ +TS  +S +   AD+ L +
Sbjct: 198 ESSLRVARAGRAAGVTVVVLTSFVESPLTALADVALVV 235


>gi|254490976|ref|ZP_05104158.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxidans DMS010]
 gi|224463885|gb|EEF80152.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxydans DMS010]
          Length = 149

 Score = 39.3 bits (90), Expect = 0.86,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILE 298
           A+ ++ E R G + V D    L GI++E D+    H+     + ++V D M   P V   
Sbjct: 26  AVNLMMEHRIGSLVVTDYDGHLVGILSERDLLNILHQKHAMWSPVTVADAMTPEPYVCEP 85

Query: 299 DTLLTVAMQLLRQHNISVLMVV 320
           D  L   M ++  +NI  L VV
Sbjct: 86  DNTLEEVMNIMVDNNIRHLPVV 107


>gi|154150815|ref|YP_001404433.1| hypothetical protein Mboo_1272 [Candidatus Methanoregula boonei
           6A8]
 gi|153999367|gb|ABS55790.1| protein of unknown function DUF39 [Methanoregula boonei 6A8]
          Length = 502

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 42/82 (51%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + V+    +L GIIT  DI +         +V D+M K       D  + VA++ L Q+N
Sbjct: 411 LPVIGRDGRLAGIITTFDISKAVANPGKASTVGDIMKKKVVTTTTDEAVDVAVRKLEQNN 470

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           IS L V+D  +  IG++  ++L
Sbjct: 471 ISALPVLDADRHVIGMLTAINL 492


>gi|24212997|ref|NP_710478.1| CBS-domain-containing membrane protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24193678|gb|AAN47496.1| CBS-domain-containing membrane protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 206

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 18/177 (10%)

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG-----KLGTLFVCASDVMH 225
           H ++P TS   +L  GD L   L +  +        L   G      L TL   A D+M 
Sbjct: 26  HSISPNTST-KKLETGDNLEYKLEKGIHSEYKSNSSLRKSGLNSIESLSTLM--AKDLMT 82

Query: 226 SGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLN 281
           S    P+V      P+  A  I  +KRF  V V+++   L GI+++ D   +R  H    
Sbjct: 83  S----PVVSFLEDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMRWRLEHNPDT 138

Query: 282 TLSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T ++ ++M  K   V +   +L ++ ++L +  I  L +++D  + IGI+   D+LR
Sbjct: 139 TQTIGEIMKTKILSVQIHARILEIS-KILFEERIGCLPIINDKIEVIGIITRSDILR 194


>gi|126734515|ref|ZP_01750261.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
 gi|126715070|gb|EBA11935.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
          Length = 608

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 6/101 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVIL 297
           DA   + +KR  C+ VV + +KL GI+T  D+  +   + L  NT  V D+M  +P+V+ 
Sbjct: 164 DAAKKMQDKRISCLCVVAK-KKLTGILTVRDLSGKALAQGLPPNT-PVSDIMTPDPRVLS 221

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +  + ++ ++ +  L +V +  K +GIV   DL RF
Sbjct: 222 PSAIGSDVLHMMMEYRLGHLPIV-EAGKLVGIVTQTDLTRF 261


>gi|46198785|ref|YP_004452.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
 gi|46196408|gb|AAS80825.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
          Length = 210

 Score = 39.3 bits (90), Expect = 0.87,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 14/113 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-------- 288
            P+++AI +L EK F  + V+ EG +L G++T+ D+         TLSV ++        
Sbjct: 18  TPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDLKDAMPSKATTLSVWEMNYLLAKLT 76

Query: 289 ---MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++  P V +E D  L  A  L+ +  I  L V+ + ++ +GI+   D+LR
Sbjct: 77  VREVMARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVTDVLR 128


>gi|325525284|gb|EGD03138.1| CBS domain-containing protein [Burkholderia sp. TJI49]
          Length = 235

 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           L+ ++ E ++ + + +    L+  D+M KN   +   T +T A+ LL +H +  L VVD 
Sbjct: 71  LEALLRETEM-QAYARTFGQLTCADLMTKNAVSVAPSTSVTAALTLLDRHRVKALPVVDG 129

Query: 323 CQKAIGIVHFLDLLR 337
             +  GIV   DL R
Sbjct: 130 DGRLTGIVTRADLTR 144


>gi|310780553|ref|YP_003968885.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
           2926]
 gi|309749876|gb|ADO84537.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
           2926]
          Length = 487

 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I+++ R   + VV+    L GIIT  D+   + KDL+   VE +M K   +   
Sbjct: 108 LADADGIMAKYRISGLPVVESDGTLVGIITNRDL--KYRKDLDE-KVETIMTKENLITAS 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L ++ I  L +VD+  K +G++   D+
Sbjct: 165 VGTTLEEAKEILLENRIEKLPIVDENSKLMGLITIKDI 202


>gi|190408188|gb|EDV11453.1| inosine-5'-monophosphate dehydrogenase IMD2 [Saccharomyces
           cerevisiae RM11-1a]
          Length = 524

 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVE 286
           P+V      +  + ++  K  F    V ++G+   KL G++T  DI   F +D ++L V 
Sbjct: 126 PIVISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDI--QFLED-DSLVVS 182

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM KNP   ++   L    ++L+Q     L++VDD    + ++   DL++
Sbjct: 183 EVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSMLSRADLMK 233


>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
 gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
          Length = 278

 Score = 39.3 bits (90), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 50/95 (52%), Gaps = 2/95 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+  + E   G + +V + +KL GIITE DI  + +  L    VE++M ++P+ +  D  
Sbjct: 105 AVRTMFEFEVGALPIVKD-KKLVGIITERDIMADLYDVLEDTRVEEIMTEDPETVPSDIT 163

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A +++       L VV++  +  G+V   D+L
Sbjct: 164 VLEAAEIMVDREFRRLPVVENG-RLCGLVTATDVL 197


>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
 gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
          Length = 559

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 26/124 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------ 274
           VK+   +++ + + ++ R G   V+D  + L G++++GDI R                  
Sbjct: 420 VKLDSTILELLKLFTKYRIGGAPVLDSQKNLIGMVSDGDIIRYLAPKEGSVHDFIYEVLV 479

Query: 275 ----NFHKDLN---TLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
               N    LN     +VEDVM K     + E+     A+++L  H+   L V+D   K 
Sbjct: 480 EDEENEQDVLNERINATVEDVMEKKQIYTVKEEDTFERAIRILSHHHFKKLPVLDSNNKV 539

Query: 327 IGIV 330
           IGI+
Sbjct: 540 IGII 543


>gi|320160262|ref|YP_004173486.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila
           UNI-1]
 gi|319994115|dbj|BAJ62886.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila
           UNI-1]
          Length = 481

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 7/100 (7%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL---E 298
           A  +++E+  G + VV +  KL G++T  D+    + D     V  VM    ++++   E
Sbjct: 112 ARELMAEREVGGLVVVSDEGKLLGMVTTRDVLLAVNGDA---PVSQVMTPRERLVVAGKE 168

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +TL + A + L QH I  L +VD+  + +G++   D+++ 
Sbjct: 169 ETLES-AREKLYQHRIEKLPLVDENDRVVGLITAQDIVKI 207


>gi|163784388|ref|ZP_02179280.1| magnesium (Mg2+) transporter-like protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880343|gb|EDP73955.1| magnesium (Mg2+) transporter-like protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 455

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 4/93 (4%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           TI  E     + VVDE ++L G+++     R          V+D+M+++   + ED    
Sbjct: 163 TISDETEVVYIYVVDEKERLVGVVS----LRELLVSPPNTQVKDIMVRDVISVREDATKD 218

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + L +++++  L VVD+  K +G+++  D++
Sbjct: 219 EVIDLFKRYDLYALPVVDENDKLVGVIYIDDVI 251


>gi|151946109|gb|EDN64340.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 524

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVE 286
           P+V      +  + ++  K  F    V ++G+   KL G++T  DI   F +D ++L V 
Sbjct: 126 PIVISPTTTVGEVKVMKRKFGFSGFPVTEDGKCPGKLVGLVTSRDI--QFLED-DSLVVS 182

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM KNP   ++   L    ++L+Q     L++VDD    + ++   DL++
Sbjct: 183 EVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSMLSRADLMK 233


>gi|119872726|ref|YP_930733.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674134|gb|ABL88390.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 127

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 4/102 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI- 296
           P+  AI  +     G V V+D      GI+TE DI R   ++++  +  + + +   +  
Sbjct: 19  PIECAIAKMYAANVGSVVVLDRSGNPVGIVTERDIVRFLAQEIDLKTPLEKVARKTLITA 78

Query: 297 -LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +ED++++ A++++ +HNI  + VVD   K IG++   D+LR
Sbjct: 79  SVEDSIISAAVKMI-EHNIRHMPVVDQ-GKIIGVISIRDVLR 118


>gi|42781359|ref|NP_978606.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10987]
 gi|42737281|gb|AAS41214.1| transcriptional regulator, RpiR family, putative [Bacillus cereus
           ATCC 10987]
          Length = 284

 Score = 39.3 bits (90), Expect = 0.89,   Method: Compositional matrix adjust.
 Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 43  SSLQGELSFQFHCAVEK-IKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           + LQ  L      A+E+ +KA++   R+   G G SG I          TG       A 
Sbjct: 109 TGLQDTLHLLNDTALEQAVKALQEANRIEFYGNGGSGIIAMDAYHKFMRTGISCI---AH 165

Query: 100 EASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             SH  +   G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A
Sbjct: 166 TDSHFQIMGAGLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLA 225

Query: 157 DIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           DI L T  +E E        ++S + QL++ D L + L
Sbjct: 226 DITLYTSTRETEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|332162328|ref|YP_004298905.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666558|gb|ADZ43202.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859114|emb|CBX69468.1| hypothetical protein YEW_JC39820 [Yersinia enterocolitica W22703]
          Length = 246

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RIIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVAC 154
             +  +     + +D + I+LS SG ++E+  I   A +FS+    +I++T+ + S +A 
Sbjct: 145 --DPYYPINSDMYQDAIAIILSVSGETEEIIRI---ANQFSLQHCKIISLTNSDNSTLAK 199

Query: 155 HADIVLTLPKEP 166
            AD+ ++    P
Sbjct: 200 MADLNISYHMPP 211


>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
 gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
          Length = 227

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 57/129 (44%), Gaps = 27/129 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           V+   P ++ + ++ E R   V VVD  +++ GI++E D+    HK             L
Sbjct: 17  VRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDL---LHKQEFGGPRRTPSGLL 73

Query: 281 NTLSVEDVMIK----NPKVILEDTLLTVAMQ--------LLRQHNISVLMVVDDCQKAIG 328
             L       K    N + ++   ++TV+ Q        ++ +H +  L V DD  + +G
Sbjct: 74  GALRRRRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMARHKVDQLPVTDDDGRLVG 133

Query: 329 IVHFLDLLR 337
           IV   D+LR
Sbjct: 134 IVARSDVLR 142


>gi|319426755|gb|ADV54829.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella putrefaciens 200]
          Length = 615

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
           S D I ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 157 SSDPI-MIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDEG-KAIGMVTSTDILR 267


>gi|29832805|ref|NP_827439.1| hypothetical protein SAV_6263 [Streptomyces avermitilis MA-4680]
 gi|29609926|dbj|BAC73974.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 157

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 60/132 (45%), Gaps = 8/132 (6%)

Query: 208 HPGGKLGTLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            P G        A ++MH G   IP  +    L  A  ++ E   G + + DE ++L GI
Sbjct: 7   RPSGTGRYFMTTAGEIMHRGAQWIPAHET---LDRAAQLMRELNVGALPISDENERLCGI 63

Query: 267 ITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+ DI        +D   ++  ++    P+ I     +T  +  ++ H I  L V++D 
Sbjct: 64  LTDRDIVVGCVAMGRDPARVTAGEMAQGTPRWIDASADVTEVLDEMQGHQIRRLPVIED- 122

Query: 324 QKAIGIVHFLDL 335
           ++ +G++   DL
Sbjct: 123 KRLVGMISEADL 134


>gi|255732411|ref|XP_002551129.1| nuclear protein SNF4 [Candida tropicalis MYA-3404]
 gi|240131415|gb|EER30975.1| nuclear protein SNF4 [Candida tropicalis MYA-3404]
          Length = 332

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMI 290
           +  P+I+ I +L+EK    + VVD+  KL  +    D+        + DL+ LS+ D ++
Sbjct: 214 MNTPVIEVIHLLTEKSVSSIPVVDDQGKLINVYEAFDVLSLVKGGMYTDLD-LSIGDALL 272

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +         L D L T+ M  +R+  +  L +VDD  K I ++   D+L +
Sbjct: 273 RRSEEFEGVHTCTLNDRLSTI-MDTIRKSRLHRLFIVDDEGKLISVITLSDILNY 326


>gi|217959778|ref|YP_002338330.1| transcriptional regulator, RpiR family [Bacillus cereus AH187]
 gi|217063170|gb|ACJ77420.1| transcriptional regulator, RpiR family [Bacillus cereus AH187]
          Length = 170

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S  GS+  L   L  AR     +IAITS  KS ++  ADI L T  +E
Sbjct: 62  GLLSKNSVVIGISHPGSNKRLLEALEIARARGAKIIAITSYQKSALSQLADITLYTSTRE 121

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 122 TEFRTE---ASSSRLAQLSLLDTLYVGL 146


>gi|56962085|ref|YP_173808.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
 gi|56908320|dbj|BAD62847.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
          Length = 282

 Score = 39.3 bits (90), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 74/163 (45%), Gaps = 9/163 (5%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           S++E SL      Q   AV  +   K R+V  G+G S       +      G   +   +
Sbjct: 107 SAIELSLSSIDRKQLEAAVAVLMTAK-RIVFYGVGGSAAAAFDGSYKFTRIG---YQASS 162

Query: 99  AEASHGDLGMI---TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           ++  H +L +I    + D+ + +S SG + ++  +  +A++  + ++AIT  ++S +   
Sbjct: 163 SQDFHYNLSLIPYMEKGDIFVAISLSGKTQDVVELATFAKKQGVTVVAITKMDRSPLYRL 222

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           ADI L  P   E    G     S + QL I D L +++   ++
Sbjct: 223 ADITLCTPNVEEDFRIG--TIASRMTQLNIIDTLYLSVFHEKD 263


>gi|223936892|ref|ZP_03628801.1| Chloride channel core [bacterium Ellin514]
 gi|223894461|gb|EEF60913.1| Chloride channel core [bacterium Ellin514]
          Length = 603

 Score = 39.3 bits (90), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 2/74 (2%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           +R G + +VD    L GIIT GD+ R    K     +V D   KNP V   D LL VA+ 
Sbjct: 484 RRQGTL-IVDGSGDLVGIITRGDVVRALQGKAAEKNTVLDSGKKNPVVTYTDELLNVAIS 542

Query: 308 LLRQHNISVLMVVD 321
            + + ++  L VV+
Sbjct: 543 KMLKQDVGRLPVVE 556


>gi|159039746|ref|YP_001538999.1| inosine-5'-monophosphate dehydrogenase [Salinispora arenicola
           CNS-205]
 gi|157918581|gb|ABW00009.1| inosine-5'-monophosphate dehydrogenase [Salinispora arenicola
           CNS-205]
          Length = 520

 Score = 39.3 bits (90), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D  ++  + R   V VVD   +L GI+T  D+   F  D  T  V ++M + P V   
Sbjct: 134 LQDVDSLCGQYRISGVPVVDGDGQLVGIVTNRDM--RFVSDPAT-PVREIMTRTPLVTAP 190

Query: 298 -----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                ED     A+ LLRQH +  L +VD   K  G++   D  +
Sbjct: 191 VGVSKED-----ALGLLRQHKVEKLPIVDGAGKLRGLITVKDFTK 230


>gi|15242788|ref|NP_201154.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|9758290|dbj|BAB08814.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737583|dbj|BAF00733.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010375|gb|AED97758.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 543

 Score = 39.3 bits (90), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKNPKV 295
           + +A   ++ +R   + + D  + L GI+T+ DI  R   ++LN     V  VM KNP  
Sbjct: 72  IYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVMTKNPMF 131

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L +TL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 132 VLSETLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 169


>gi|332284551|ref|YP_004416462.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
 gi|330428504|gb|AEC19838.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
          Length = 153

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NT--LSVEDVMIKNP 293
            P++ A+  +SE+  G + ++D G+ L G++T  +I R+ H++  NT   +V  VM   P
Sbjct: 22  TPILQALETMSEQDIGSLVIMDHGE-LAGMLTFREIIRHLHRNQGNTGNYTVRSVMDDAP 80

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  +T      +L+ + + +  M V D    +G++ F D+
Sbjct: 81  VSVSPNTSFEEVQRLMLEKH-ARYMPVMDGPTLMGVISFYDM 121


>gi|328478413|gb|EGF48163.1| CBS domain-containing protein [Lactobacillus rhamnosus MTCC 5462]
          Length = 145

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R +F     TL    VM +
Sbjct: 28  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 87

Query: 292 NPKV--ILEDTLLTVAMQLLRQHNISVLMVV 320
            P V  +  DT +  A +LL +HN+  L V+
Sbjct: 88  MPNVVTVTADTTIMAASKLLLKHNVDSLPVI 118


>gi|283786177|ref|YP_003366042.1| RpiR-family transcriptional regulator [Citrobacter rodentium
           ICC168]
 gi|282949631|emb|CBG89250.1| RpiR-family transcriptional regulator [Citrobacter rodentium
           ICC168]
          Length = 282

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 37/80 (46%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+TGIG SG +    A  L   G  +       A    +  +T DDL++ +S+SG   
Sbjct: 134 RIVLTGIGASGLVAQNFAWKLLKIGVNATVERDMHALLATVQALTPDDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAIT 145
           EL        R    ++AIT
Sbjct: 194 ELNLAADETLRVGARILAIT 213


>gi|209885959|ref|YP_002289816.1| putative signal-transduction protein with CBS domains [Oligotropha
           carboxidovorans OM5]
 gi|209874155|gb|ACI93951.1| putative signal-transduction protein with CBS domains [Oligotropha
           carboxidovorans OM5]
          Length = 194

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           L+DA ++L   R   V V ++  K+ G++T  DI     +      T SV  VM ++   
Sbjct: 70  LVDAASLLGSGRIDLVVVCEDTGKMAGVVTRMDIVSRISRCQGHACTASVASVMSRDVIY 129

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                LL  A + +++   + + VVDD  + +G ++  D L+
Sbjct: 130 CRPPELLETAWKRMKEKGHAHIPVVDDDNRPLGTLNARDALQ 171


>gi|120598469|ref|YP_963043.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
 gi|120558562|gb|ABM24489.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
          Length = 615

 Score = 39.3 bits (90), Expect = 0.92,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
           S D I ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 157 SSDPI-MIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDEG-KAIGMVTSTDILR 267


>gi|318606396|emb|CBY27894.1| phosphosugar-binding transcriptional regulator,RpiR family
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 246

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 65/132 (49%), Gaps = 9/132 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RIIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVAC 154
             +  +     + +D + I+LS SG ++E+  I   A +FS+    +I++T+ + S +A 
Sbjct: 145 --DPYYPINSDMYQDAIAIILSVSGETEEIIRI---ANQFSLQHCKIISLTNSDNSTLAK 199

Query: 155 HADIVLTLPKEP 166
            AD+ ++    P
Sbjct: 200 MADLNISYHMPP 211


>gi|241956868|ref|XP_002421154.1| SNF1 protein-kinase interacting protein, putative; activator of
           glucose-repressible genes, putative; regulatory nuclear
           protein, putative [Candida dubliniensis CD36]
 gi|223644497|emb|CAX41313.1| SNF1 protein-kinase interacting protein, putative [Candida
           dubliniensis CD36]
          Length = 336

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 32/115 (27%), Positives = 55/115 (47%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMI 290
           +  P+I+ I +L+E     + +VDE  KL  +    DI        + DL+ LSV D ++
Sbjct: 218 MDTPVIEVIHLLTENSVSSIPIVDEQGKLINVYEAVDILALVKGGMYTDLD-LSVGDALL 276

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +         L D L T+ M  +R+  +  L VVDD  K + ++   D+L +
Sbjct: 277 RRQEEFEGVHTCTLNDRLSTI-MDTIRKSRLHRLFVVDDEGKLVSVITLSDILNY 330


>gi|55980798|ref|YP_144095.1| putative acetoin dehydrogenase [Thermus thermophilus HB8]
 gi|55772211|dbj|BAD70652.1| putative acetoin utilization protein, acetoin dehydrogenase
           [Thermus thermophilus HB8]
          Length = 210

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 14/113 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-------- 288
            P+++AI +L EK F  + V+ EG +L G++T+ D+         TLSV ++        
Sbjct: 18  TPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDLKDAMPSKATTLSVWEMNYLLAKLT 76

Query: 289 ---MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++  P V +E D  L  A  L+ +  I  L V+ + ++ +GI+   D+LR
Sbjct: 77  VREVMARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVTDVLR 128


>gi|146293453|ref|YP_001183877.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
 gi|145565143|gb|ABP76078.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
          Length = 615

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 58/114 (50%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
           S D I ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 157 SSDPI-MIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDEG-KAIGMVTSTDILR 267


>gi|309389954|gb|ADO77834.1| putative signal transduction protein with CBS domains
           [Halanaerobium praevalens DSM 2228]
          Length = 263

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 4/104 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           + +   +++A  ILS  + G + V ++G K+ G++T+GDI     +DL    V D M  +
Sbjct: 15  ISLNATIMEAEKILSINKIGRLLVEEDG-KVFGMLTDGDIIS--ERDLEA-PVSDFMSDD 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I E++ +  A + L  ++I  L V DD ++ +GIV   D++
Sbjct: 71  LITINENSTVQQAAKKLSDNHIGGLPVFDDKKRLVGIVTSEDIV 114


>gi|303247272|ref|ZP_07333546.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio
           fructosovorans JJ]
 gi|302491431|gb|EFL51319.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio
           fructosovorans JJ]
          Length = 485

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDT 300
           A+ ++SE     + VVD G +L GI+T  D+   F KD +   V DVM K N K +   T
Sbjct: 109 ALVVMSEYSISGLPVVD-GDRLVGIVTNRDV--RFVKD-SVTKVGDVMTKENLKTVPVGT 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A   L  + I  L+VVD   K  G++   D+ + 
Sbjct: 165 TLEEAKAHLHANRIEKLLVVDSNNKLRGLITIKDIEKI 202


>gi|301053805|ref|YP_003792016.1| RpiR family transcriptional regulator [Bacillus anthracis CI]
 gi|300375974|gb|ADK04878.1| transcriptional regulator, RpiR family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 176

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 68  GLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLADITLYTSTRE 127

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 128 TEFRTE---ASSSRLAQLSLIDTLYVGL 152


>gi|146279621|ref|YP_001169779.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557862|gb|ABP72474.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 139

 Score = 39.3 bits (90), Expect = 0.93,   Method: Compositional matrix adjust.
 Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 2/62 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           ASDVM  G  I   +   P+ DAI  + E+R   + V+D+ ++L G++  GDI  +  +D
Sbjct: 68  ASDVMTEG--IVWCRTSQPISDAIHQMEERRIRRLPVIDDNKRLVGMLALGDIAHSATRD 125

Query: 280 LN 281
           L 
Sbjct: 126 LT 127


>gi|332852868|ref|ZP_08434450.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332866715|ref|ZP_08437177.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332873571|ref|ZP_08441520.1| CBS domain protein [Acinetobacter baumannii 6014059]
 gi|332728982|gb|EGJ60333.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332734484|gb|EGJ65599.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332738268|gb|EGJ69146.1| CBS domain protein [Acinetobacter baumannii 6014059]
          Length = 351

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 60/118 (50%), Gaps = 14/118 (11%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DL 280
           ++H  DSI         + A+ +L       V VVD+  +L G IT+GDI R   K  DL
Sbjct: 9   ILHKNDSI---------LKALELLDLYALRIVLVVDDNNQLIGSITDGDIRRGLLKGQDL 59

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  SV+ +M  NP  I E +L    + +++R+ +   L ++ + Q  + I+   DL+R
Sbjct: 60  HA-SVDTIMHTNPYSIEEGSLDNRQIFEIMREKSYLALPIIKNNQ-LVNIITLDDLIR 115


>gi|258516199|ref|YP_003192421.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257779904|gb|ACV63798.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 212

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 64/124 (51%), Gaps = 15/124 (12%)

Query: 229 SIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           S+P+V    C + DA+  +  +  G + VV EG  L+G+I+  D+ +     +D++ L V
Sbjct: 82  SVPIVVSEKCSVYDAVVTMFIEDVGTLFVVREGGLLEGVISRKDLLKITLGGQDIHKLPV 141

Query: 286 EDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVV--------DDCQKAIGIVHFLD 334
             +M + PKVI   LED++   A +++  H +  L V+         +  + +G +   +
Sbjct: 142 GVIMTRMPKVITVELEDSVWLAAYKMI-VHEVDALPVIRKITTEKEQEGYEVVGRISKTN 200

Query: 335 LLRF 338
           ++RF
Sbjct: 201 IVRF 204


>gi|219851915|ref|YP_002466347.1| protein of unknown function DUF39 [Methanosphaerula palustris
           E1-9c]
 gi|219546174|gb|ACL16624.1| protein of unknown function DUF39 [Methanosphaerula palustris
           E1-9c]
          Length = 502

 Score = 39.3 bits (90), Expect = 0.94,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 38/74 (51%)

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L G++T  D+ +          V ++M +       D ++ VA Q L Q+NIS L V+D
Sbjct: 419 RLVGMVTTYDLSKAVANPGKVSLVREIMTRKVITTTPDEVVDVAAQKLEQYNISALPVID 478

Query: 322 DCQKAIGIVHFLDL 335
              + +G++  LDL
Sbjct: 479 KAGRVLGMLTALDL 492


>gi|313204810|ref|YP_004043467.1| cL- channel voltage-gated family protein [Paludibacter
           propionicigenes WB4]
 gi|312444126|gb|ADQ80482.1| Cl- channel voltage-gated family protein [Paludibacter
           propionicigenes WB4]
          Length = 592

 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 58/142 (40%), Gaps = 23/142 (16%)

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           D   + +L+  NF E DF  L+P   LG L      +  S  +I       P+++ +T  
Sbjct: 453 DKAILTMLKMENFIETDFITLYPDMTLGEL---VKKISKSKRNI------FPVVNPVT-- 501

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
              R   + +VDE   ++ I+   D++  F        V  +M   P ++     +   M
Sbjct: 502 --NRLNGIVLVDE---VRNIMFRPDLYNRF-------KVNKLMTSPPALLNASMPMETVM 549

Query: 307 QLLRQHNISVLMVVDDCQKAIG 328
            +    N   L VVDD +  +G
Sbjct: 550 DIFEDTNSWYLPVVDDNKVYLG 571


>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
           3519-10]
          Length = 486

 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 56/99 (56%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L++A  +++  +   + VVD   KL GIIT  D+   + ++L+   VE++M K+ K+I  
Sbjct: 109 LMEAKEMMANFKISGLPVVDADNKLIGIITNRDV--KYQENLSA-KVEELMTKD-KLITS 164

Query: 299 D--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D  T L  A Q+L ++ +  L +VD   K +G++   D+
Sbjct: 165 DKATNLEQAKQILLKNRVEKLPIVDSEFKLVGLITIKDI 203


>gi|227827987|ref|YP_002829767.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.14.25]
 gi|227459783|gb|ACP38469.1| glucosamine--fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus M.14.25]
          Length = 591

 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LES + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLESAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|160286268|pdb|2YZQ|A Chain A, Crystal Structure Of Uncharacterized Conserved Protein
           From Pyrococcus Horikoshii
          Length = 282

 Score = 39.3 bits (90), Expect = 0.95,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
           +P+VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    + +E
Sbjct: 70  VPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIE 129

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +   ++ E T L  A++ L   N   L VVD     +GIV   DLLR
Sbjct: 130 PYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180


>gi|170757000|ref|YP_001782331.1| nucleotidyl transferase [Clostridium botulinum B1 str. Okra]
 gi|169122212|gb|ACA46048.1| nucleotidyl transferase [Clostridium botulinum B1 str. Okra]
          Length = 358

 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 17/125 (13%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           LG + VC S                 L++ +  ++  + G   VVD+  KL G IT+GDI
Sbjct: 4   LGNILVCES---------------TTLLETLNAINLNQKGTAIVVDKENKLLGTITDGDI 48

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   ++++   S++++  KN     E   LT AMQ   + +I ++ +++  QK    + 
Sbjct: 49  RRAILENISLNSSIKNIYNKNCICFNESYDLTKAMQYFTK-SIKLIPIINKNQKVTSYLE 107

Query: 332 FLDLL 336
             D+L
Sbjct: 108 LTDVL 112


>gi|149197351|ref|ZP_01874402.1| Signal-transduction protein [Lentisphaera araneosa HTCC2155]
 gi|149139369|gb|EDM27771.1| Signal-transduction protein [Lentisphaera araneosa HTCC2155]
          Length = 629

 Score = 39.3 bits (90), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVI 296
           L +   I+S+  FG   V++E QKL G+I++ DI R+    +  ++    D+M KN K I
Sbjct: 180 LSEVAKIMSDSDFGFCMVMNE-QKLTGVISDSDIRRSIAAGQPPSSTFASDIMTKNVKTI 238

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D  +  A+  + +H +S L  ++   +   ++  LDL
Sbjct: 239 QDDYSVLEALLKMERHGLSHLPGINSDGEVSAVLSALDL 277


>gi|328949196|ref|YP_004366533.1| Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Treponema succinifaciens DSM 2489]
 gi|328449520|gb|AEB15236.1| Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Treponema succinifaciens DSM 2489]
          Length = 613

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 1/138 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           ++ F   C  EK K  K R+VI   G + H G                V  A        
Sbjct: 282 DIKFDELCFDEKWKEAK-RIVIVACGTAYHAGVVAKYVFEQLARVPVVVDVASEFRYRNP 340

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++ +DD+ IV+S SG + +  A L  A++  + + AIT+   S V+  AD V+     PE
Sbjct: 341 ILCKDDIFIVISQSGETADTLAALRLAKQNGVHVTAITNCVGSTVSREADDVVYTWAGPE 400

Query: 168 SCPHGLAPTTSAIMQLAI 185
                    T+ +M L +
Sbjct: 401 IAVASTKAYTTQLMCLCM 418


>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 236

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 29/125 (23%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------------- 284
           L DAI ++   R   + VV E   L G++TEGD+ R    +L T S              
Sbjct: 20  LADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMR--RSELETRSGHGWLGDLFRSSGR 77

Query: 285 ------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                       V D+M   P  +   T+L  A+++L   NI  L VV++  + +G+V  
Sbjct: 78  QASEYVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVVEN-NRVVGMVSR 136

Query: 333 LDLLR 337
            D+LR
Sbjct: 137 TDVLR 141


>gi|78776797|ref|YP_393112.1| nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251]
 gi|78497337|gb|ABB43877.1| Nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251]
          Length = 348

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 55/103 (53%), Gaps = 11/103 (10%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI-L 297
           +A+ I+         +VDE  +L G +T+GDI R   K  DLN+ S+E V+ K P V  +
Sbjct: 17  EALIIIDSGAMQIALIVDENDRLLGTLTDGDIRRGLLKGLDLNS-SIESVIFKTPTVAKI 75

Query: 298 EDT---LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DT   +L +A+   + H I    +VD+  K IGI    +L++
Sbjct: 76  SDTKEEILKIALT-KKLHQIP---IVDEDGKIIGIQDIEELIK 114


>gi|24374385|ref|NP_718428.1| CBS domain-containing protein [Shewanella oneidensis MR-1]
 gi|24348950|gb|AAN55872.1|AE015724_5 CBS domain protein [Shewanella oneidensis MR-1]
          Length = 620

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 34/102 (33%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILED 299
           A  ++   R   + V D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGLDGQIAVHQAMTTSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVD----DCQKAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++D    D  KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDILR 272


>gi|323705010|ref|ZP_08116586.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535436|gb|EGB25211.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 441

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVDE   L GI+T  +I +    D     + D+M +NP  + E T +  A  L+   NI 
Sbjct: 229 VVDESGTLVGIVTSREIAKADDND----KIGDIMARNPIYVTETTTVAFAAHLMIWWNIE 284

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           VL V ++ ++ +GI+   D+++
Sbjct: 285 VLPVTNN-KELVGIISREDVIK 305


>gi|323475077|gb|ADX85683.1| glucosamine-fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus REY15A]
 gi|323477809|gb|ADX83047.1| glucosamine-fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus HVE10/4]
          Length = 591

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LES + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLESAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|296168784|ref|ZP_06850470.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295896545|gb|EFG76190.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 536

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  T  V +VM K P +  ++ +    A+ L
Sbjct: 156 RISGLPVVDDAGALVGIITNRDM--RFEVD-QTRKVAEVMTKAPLITAQEGVSADAALGL 212

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 213 LRRNKIEKLPVVDGHGRLTGLITVKDFVK 241


>gi|302384373|ref|YP_003820196.1| nucleotidyl transferase [Brevundimonas subvibrioides ATCC 15264]
 gi|302195001|gb|ADL02573.1| Nucleotidyl transferase [Brevundimonas subvibrioides ATCC 15264]
          Length = 356

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVIL 297
           L+DAI  +   R   + VVD  ++L G +++GDI R   + L   + V  VM ++P  + 
Sbjct: 18  LLDAIERMDAVRRKLIVVVDADRRLLGTVSDGDIRRGLMRRLEMQAPVSAVMNRDPVAVR 77

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                  AM  L +  +S+  ++D   + +G+
Sbjct: 78  VAGPEAEAMVRLSERGVSLAPLLDGGGRVVGL 109


>gi|261368578|ref|ZP_05981461.1| RpiR-family transcriptional regulator [Subdoligranulum variabile
           DSM 15176]
 gi|282569297|gb|EFB74832.1| RpiR-family transcriptional regulator [Subdoligranulum variabile
           DSM 15176]
          Length = 258

 Score = 39.3 bits (90), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 11/144 (7%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +L+S L      Q     + I  + G+ + +   G SG +G  LA  L + G    F   
Sbjct: 90  NLDSLLAYNAYDQLKACAQHIAGLNGKFIFVYATGFSGLVGEYLAKKLTNMGRLCLF--- 146

Query: 99  AEASHGD-LGMITRD----DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             A  GD +GM         L + +S SG +  ++  +  AR   +P +AIT E  + V+
Sbjct: 147 --AGGGDSVGMFENSLDSMGLFLCVSKSGETALVRDKIKTARENGVPTVAITGERPNSVS 204

Query: 154 CHADIVLTLPKEPESCPHGLAPTT 177
            +AD+   +    +     + P T
Sbjct: 205 QYADLWFRVEDYCKLDDQNVRPNT 228


>gi|323355094|gb|EGA86924.1| Snf4p [Saccharomyces cerevisiae VL3]
          Length = 322

 Score = 39.3 bits (90), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L++ R   V ++DE   L  +    D+
Sbjct: 188 IGDLNIITQDXMKS------CQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDV 241

Query: 273 FR----NFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 242 LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 300

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 301 VGRLVGVLTLSDILKY 316


>gi|305663917|ref|YP_003860205.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304378486|gb|ADM28325.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 134

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 7/123 (5%)

Query: 220 ASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH 277
           ASDVM      P+ ++    + DAI ++       + V DE   + G+IT  DI  R   
Sbjct: 4   ASDVMVPN---PIQIRALATVYDAIKLMERHNIASLIVTDENDVVLGVITAKDIVIRVLA 60

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K  D+ T  + +++ K   V+  DTLL   + ++       + VV+   KAIGIV   D+
Sbjct: 61  KGLDIKTTKIIEIVSKPVTVVEPDTLLKDVVNMMIGTGHGHIPVVNKAGKAIGIVTIDDI 120

Query: 336 LRF 338
           L+F
Sbjct: 121 LKF 123


>gi|297162511|gb|ADI12223.1| hypothetical protein SBI_09105 [Streptomyces bingchenggensis BCW-1]
          Length = 223

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 8/111 (7%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           D +  V  G  L +   +L+  R G + VVDE +K+ G+++  D+     +  +      
Sbjct: 12  DDVVRVGSGASLHEVGELLARHRIGGLPVVDEDEKVVGVVSGADL-----RTGSAARTAG 66

Query: 288 VMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  P V +  +D+++  A  + R H +  L V+D+  + +GIV   DLL
Sbjct: 67  QLMSRPAVTVRPQDSVVDAARTMAR-HGVERLPVIDEEDRLVGIVTRRDLL 116


>gi|253576506|ref|ZP_04853835.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844143|gb|EES72162.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 288

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 28/154 (18%)

Query: 28  LRSIIAE--KRGLSSLESSL----QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           L +IIA   +  + S+E +L    +GE++     AV+ ++A   R+V  GIG SG +   
Sbjct: 99  LDTIIANISRNNMKSIEDTLSVLDRGEVAR----AVKALRA-SNRIVFFGIGASGLV--- 150

Query: 82  LASTLASTGTPSF-----FVHAAEASHGDLGMIT---RDDLIIVLSWSGSSDELKAILYY 133
                   G   F       H+    H  L   T   + D+ I +S SG++ E+   L  
Sbjct: 151 -----CQDGEQKFSRINKMCHSYTDGHSQLTAATLLGKGDVAIFVSNSGNTLEIIETLEI 205

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           A++ +   +AIT  NKS +A  ADI+L +   PE
Sbjct: 206 AKKNNATTVAITKYNKSELADKADILLGIS-TPE 238


>gi|269925265|ref|YP_003321888.1| sugar isomerase (SIS) [Thermobaculum terrenum ATCC BAA-798]
 gi|269788925|gb|ACZ41066.1| sugar isomerase (SIS) [Thermobaculum terrenum ATCC BAA-798]
          Length = 198

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 69/151 (45%), Gaps = 25/151 (16%)

Query: 21  NSTVQ--CALRSIIAEKRGLSSLESS-LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           N+ +Q  C+ + I+    G S+ ++  + GEL  +F          K R  I  +     
Sbjct: 35  NTLIQSLCSNKKILICGNGGSAAQAQHMAGELIGRFK---------KNRAPIAALA---- 81

Query: 78  IGSKLASTLA---STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           +G+ +A+T A     G    F+   +A   D       D++++LS SG+S  + A +  A
Sbjct: 82  LGTDMATTTAIANDFGYEEVFLRQVDALGND------GDVLLILSTSGNSPNVLAAVNTA 135

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           RR  +  +A T +  S V   ADIV+  P E
Sbjct: 136 RRKGLKTVAFTGKKPSKVEDLADIVVRFPAE 166


>gi|254478846|ref|ZP_05092211.1| nucleotidyl transferase family protein [Carboxydibrachium pacificum
           DSM 12653]
 gi|214035208|gb|EEB75917.1| nucleotidyl transferase family protein [Carboxydibrachium pacificum
           DSM 12653]
          Length = 352

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 59/113 (52%), Gaps = 14/113 (12%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED---- 287
           L+K    + +A+  L+E     + V+D+  KL G IT+GDI R     LN +S ++    
Sbjct: 8   LIKKESLIKEALKQLNENTLQILLVIDDSSKLIGTITDGDIRRAI---LNNVSFDEPVSK 64

Query: 288 VMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+PK +    E+     A +L+ +H +  + V+D  ++ I ++   +LL 
Sbjct: 65  IMNKSPKFVYIGEEEK----AKELMIKHKVKTIPVLDKEKRVIDLILMENLLE 113


>gi|182625116|ref|ZP_02952893.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens D str. JGS1721]
 gi|177909736|gb|EDT72162.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens D str. JGS1721]
          Length = 378

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|149181717|ref|ZP_01860209.1| CBS domain protein [Bacillus sp. SG-1]
 gi|148850565|gb|EDL64723.1| CBS domain protein [Bacillus sp. SG-1]
          Length = 144

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 237 CPLIDAI----TILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           C L+D +      + E   G + +VD G  L G+IT+ DI       K   +  VE+VM 
Sbjct: 14  CTLLDNVYEVAVKMKENDVGGIPIVD-GDHLVGMITDRDIVVRGVAEKHPGSSKVEEVMS 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                +  DT +  A  L+ +H I  L VV D QK IGIV   DL
Sbjct: 73  DELVTVGADTTIDEAASLMSRHQIRRLPVV-DGQKLIGIVSLGDL 116


>gi|172063448|ref|YP_001811099.1| CBS domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995965|gb|ACB66883.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MC40-6]
          Length = 391

 Score = 39.3 bits (90), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ +L +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTVLERHRVKALPVVDGDARLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300


>gi|325478924|gb|EGC82032.1| putative 6-phospho 3-hexuloisomerase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 177

 Score = 39.3 bits (90), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 32/132 (24%), Positives = 63/132 (47%), Gaps = 13/132 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG--MITRDDLIIVLSWSGS 123
           R+ I G+G+S      L + L   G  ++ +       GD+   +  +DD ++++S SG+
Sbjct: 38  RIFIGGVGRSSMAARGLVNRLVHLGYYAYLI-------GDISTPLARKDDTVLLISNSGN 90

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC-PHGLAPTTSAIMQ 182
           +  L A+    ++  + +++ITS   S +   +D  L L    +S  P G     +A++ 
Sbjct: 91  TSSLYAVAERVKKDGVKILSITSNKNSKIFEISDFSLILKGAEKSVQPMGSLFEQAALL- 149

Query: 183 LAIGDALAIALL 194
             I DA  + L+
Sbjct: 150 --ISDAFILFLM 159


>gi|168208865|ref|ZP_02634490.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens B str. ATCC 3626]
 gi|170712836|gb|EDT25018.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens B str. ATCC 3626]
          Length = 378

 Score = 39.3 bits (90), Expect = 1.00,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|307595155|ref|YP_003901472.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta distributa DSM 14429]
 gi|307550356|gb|ADN50421.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta distributa DSM 14429]
          Length = 204

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFV-HAAEASHGDLGMITRDDLIIVLSWSGSS 124
           +V++ G G+SG +G   A  L   G  S+ +      S GD       DL++ +S SG++
Sbjct: 46  KVLVVGAGRSGLVGRAFAMRLMHLGFRSYVLGETITPSVGD------GDLVVAISGSGTT 99

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
             + A    A++    ++AITS   S +A +AD+V+ +P
Sbjct: 100 TMVVAAAEAAKKMRARVVAITSYRDSPLANYADLVVQVP 138


>gi|229585256|ref|YP_002843758.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.16.27]
 gi|228020306|gb|ACP55713.1| glucosamine--fructose-6-phosphate amino transferase, isomerizing
           [Sulfolobus islandicus M.16.27]
          Length = 591

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 53/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LES + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLESAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|148978546|ref|ZP_01814998.1| transcriptional regulator, RpiR family protein [Vibrionales
           bacterium SWAT-3]
 gi|145962335|gb|EDK27616.1| transcriptional regulator, RpiR family protein [Vibrionales
           bacterium SWAT-3]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLGMITRDDLIIVLSWS 121
            ++ I+G+G S  +    A  L   G     VHA   +H    +   +T +D+++ +S+S
Sbjct: 133 NKIQISGVGASSLVAKDFAYKLMKIG---HAVHAEPDAHIQIANAASLTENDVLVAISYS 189

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           G + E+  +   AR     +I I+  + S +  +ADI L
Sbjct: 190 GKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADIKL 228


>gi|78223496|ref|YP_385243.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
           GS-15]
 gi|78194751|gb|ABB32518.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
           GS-15]
          Length = 491

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A+ I+ + R   V V +   KL GI+T  D+   F  DLN L +   M K   V +   
Sbjct: 109 EALAIMEKYRISGVPVTNAKGKLVGILTNRDL--RFETDLN-LPISARMTKKRLVTVAVG 165

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A + L+Q  +  L+VVDD +   G++   D+
Sbjct: 166 TTLEEAKEHLKQTRVEKLLVVDDDKNLKGLITIKDI 201


>gi|320180561|gb|EFW55492.1| Putative transcriptional regulator [Shigella boydii ATCC 9905]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            VH   A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVHDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|305663816|ref|YP_003860104.1| 3-hexulose-6-phosphate isomerase [Ignisphaera aggregans DSM 17230]
 gi|304378385|gb|ADM28224.1| 3-hexulose-6-phosphate isomerase [Ignisphaera aggregans DSM 17230]
          Length = 198

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 9/100 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD--LGMITRDDLIIVLSWSGS 123
           R+++ G G+SG +G   A  L   G   + +       GD  +  + +DD++I +S SG 
Sbjct: 41  RILVIGAGRSGLVGRAFAMRLKHLGFDVYVL-------GDTIVSPVRKDDIVIAISGSGR 93

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           +  +      A+     +IAITS   S +A  AD+V+ +P
Sbjct: 94  TALIVTAAEAAKTVGAKVIAITSFIDSPLARLADVVVEIP 133


>gi|320449248|ref|YP_004201344.1| CBS domain-containing protein [Thermus scotoductus SA-01]
 gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
          Length = 143

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 11/118 (9%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NF 276
           ++  G  +  V     +++A+  L+E   G + V+ EG++L GI +E D  R       F
Sbjct: 7   LLRKGGGVYSVHPQATVLEALRKLAEHDIGALLVM-EGERLLGIFSERDYARKLVLLGRF 65

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            K      VE+VM +    +  +T L  AM+L+ +H +  L V+++  + +G+V   D
Sbjct: 66  SKGTR---VEEVMTREVITVTPETTLQEAMRLMTEHRVRHLPVLEEG-RVVGVVSIGD 119


>gi|282162967|ref|YP_003355352.1| hypothetical protein MCP_0297 [Methanocella paludicola SANAE]
 gi|282155281|dbj|BAI60369.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 325

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 1/111 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + +  V+    L DAI ++ ++  G V V+D    + GIITE DI R     ++   V D
Sbjct: 135 EDVATVQDDASLDDAIKVMIDRSVGGVPVIDPESIVVGIITERDIVRLMGDSVSGTKVRD 194

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M +       +  +  A + + +     L VV D     GI+   D++R+
Sbjct: 195 IMSRRVTTAPPNMPIETAAKTMIESGFRRLPVVTDSY-VCGIITATDIMRY 244


>gi|296108946|ref|YP_003615895.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433760|gb|ADG12931.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 293

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 17/122 (13%)

Query: 229 SIPLVK---IGCPLI----------DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           SIP +K   IG PL           +A    +EK      V+ E   L GI+T  DI +N
Sbjct: 166 SIPNLKVSDIGNPLKYYLTPNMSLKEAAEYFAEKNISGAPVM-ENNNLVGILTVRDIIKN 224

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +K      V++VM K+   + +D  +  A++++ ++N+  L++VD+  K  GI+   D+
Sbjct: 225 INKI--DKKVKEVMKKDIITVDKDVKIYDALKIMNKYNVGRLIIVDN-NKVFGIITRTDI 281

Query: 336 LR 337
           L+
Sbjct: 282 LK 283


>gi|227497245|ref|ZP_03927485.1| IMP dehydrogenase [Actinomyces urogenitalis DSM 15434]
 gi|226833293|gb|EEH65676.1| IMP dehydrogenase [Actinomyces urogenitalis DSM 15434]
          Length = 509

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV--AMQLLRQHN 313
           VVDEG  L GIIT  D+         TL V D M    ++I   T ++   A  LL +H 
Sbjct: 133 VVDEGGNLLGIITNRDLRFVPADTWGTLRVRDCMTPRERLITGPTGISREDAKALLAEHR 192

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VD   +  G++   D ++
Sbjct: 193 IEKLPLVDATGRLTGLITVKDFVK 216


>gi|20093428|ref|NP_619503.1| hypothetical protein MA4649 [Methanosarcina acetivorans C2A]
 gi|19918802|gb|AAM07983.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 333

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+T + E+R G + +V++  ++  I TE +        +   +V++ M KN  ++  DT
Sbjct: 159 DAVTTMLERRTGGLPIVNDEMQVIAIFTERNAVELMGGIVTNKTVDEYMTKNVTMVTTDT 218

Query: 301 LLTVAMQLLRQHNISVLMVVDD-----CQKAIGIVHFL 333
            +  A +++ Q+    L VV D        A  IVHFL
Sbjct: 219 PIGQAAKVMVQNRFRRLPVVKDGIFAGIVTASDIVHFL 256


>gi|239925803|gb|ACS35536.1| myosin 29 [Phaeodactylum tricornutum]
          Length = 2303

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 32/99 (32%), Positives = 44/99 (44%), Gaps = 5/99 (5%)

Query: 246  LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK-VILEDTL 301
            LS KR     VV     L GI+T+ DI R     H D +  SV +VM  NP  V + D+ 
Sbjct: 1818 LSSKRGAASLVVSTDGSLAGIMTDTDITRRVVAKHIDTSATSVSEVMTPNPTCVAMSDSA 1877

Query: 302  LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +     ++  H    L VVDD    +G++     L   I
Sbjct: 1878 MDALTTMVENH-FRHLPVVDDQGSVVGLLDIAKCLNDAI 1915


>gi|239630890|ref|ZP_04673921.1| predicted protein [Lactobacillus paracasei subsp. paracasei 8700:2]
 gi|239527173|gb|EEQ66174.1| predicted protein [Lactobacillus paracasei subsp. paracasei 8700:2]
          Length = 269

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 5/79 (6%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL---TLPKEP 166
            +D+LI+V S  G  +EL   +  A++  +P++ ITS   S +  HAD+ L   +L K  
Sbjct: 168 NKDELIVVASLRGDDEELLEAMKIAKKRRVPILLITSNRYSQLIPHADVTLLAASLTK-- 225

Query: 167 ESCPHGLAPTTSAIMQLAI 185
           E     ++P    ++QL I
Sbjct: 226 EEALGNISPQIPILIQLDI 244


>gi|302390701|ref|YP_003826522.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermosediminibacter oceani DSM 16646]
 gi|302201329|gb|ADL08899.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermosediminibacter oceani DSM 16646]
          Length = 367

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 13/118 (11%)

Query: 217 FVCASDVMHSG--DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +V A D+M +    ++P       L  A+ I+SE     + VVD+  +L GI+T  DI  
Sbjct: 247 YVMAGDIMITNPVKTLP----SRTLAQAVEIMSESGVDSILVVDKENRLLGIVTAEDIRA 302

Query: 274 -RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R+  K L  +   +V    P    +D++L V ++L+ Q NI  + VVD+     G++
Sbjct: 303 GRDKAKKLEEIYTRNVFTVKP----DDSILDV-LRLMSQKNIGYVPVVDENNVLKGLI 355


>gi|288920279|ref|ZP_06414592.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
 gi|288348303|gb|EFC82567.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
          Length = 139

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           L +A   + E   G V VVD+G+ L GI+T+ DI        +D +   V +      + 
Sbjct: 22  LAEAARTMRETEAGDVLVVDDGE-LVGILTDRDIVVRIVAEDRDTSAAKVSEACSTELET 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  DTL+  A +L+R   +  L VV+  Q  IGIV   DL
Sbjct: 81  VTPDTLIDDAAELMRLRAVRRLPVVEGTQP-IGIVSLGDL 119


>gi|316934642|ref|YP_004109624.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           DX-1]
 gi|315602356|gb|ADU44891.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           DX-1]
          Length = 498

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV  G      KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LADALALMNQYGFSGIPVVTGGHGHGPGKLVGILTNRDV--RFATDPAQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL QH I  L+VVD+  + +G++   D+
Sbjct: 169 VTVREGVSQDEAKKLLHQHRIEKLLVVDEQYRCVGLITVKDM 210


>gi|312199962|ref|YP_004020023.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EuI1c]
 gi|311231298|gb|ADP84153.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EuI1c]
          Length = 544

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           +A  +++  R   V V  E   L GI+T  DI   R+F + +  +     +I  P  +  
Sbjct: 153 EANAMMARYRISGVPVTGEDGTLLGIVTNRDIRFERDFARPVREVMTPMPLITAPVGVSS 212

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D     A++LLRQH I  L +VD   +  G++   D  +
Sbjct: 213 DE----ALRLLRQHKIEKLPIVDGRGRLCGLITVKDFTK 247


>gi|213425285|ref|ZP_03358035.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 328

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|207344467|gb|EDZ71600.1| YHR216Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 333

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 6/90 (6%)

Query: 251 FGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           F    V  +G+   KL G+IT  DI   F +D N+L V+DVM KNP    +   L+   +
Sbjct: 146 FAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITLSEGNE 202

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L++     L+VVD+    + ++   DL++
Sbjct: 203 ILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|170746534|ref|YP_001752794.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653056|gb|ACB22111.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 497

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 11/104 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDI--FRNFHKDLNTLSVEDVMIK 291
           L DA  ++   R   + VV+ G      KL GI+T  D+    N ++ +  L   D +I 
Sbjct: 110 LADAFEVMKLNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNSNQPVAELMTRDRLIT 169

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +D     A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 170 VREGVTQDE----AKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|118475093|ref|YP_891788.1| inosine 5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414319|gb|ABK82739.1| inosine-5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 483

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            +K    + +A+ ++SE R   V VVD+   L GI+T  D+   F  D  T  V D M K
Sbjct: 98  FIKPNATIREALELMSEYRISGVPVVDDDNVLIGILTNRDL--RFENDF-TKQVSDAMTK 154

Query: 292 NPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P +   +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 155 PPLITAPKGCTLDDAEKIFSTNKVEKLPIVDESGRLEGLITIKDLKK 201


>gi|18309539|ref|NP_561473.1| glycine betaine/carnitine/choline ABC transporter [Clostridium
           perfringens str. 13]
 gi|18144216|dbj|BAB80263.1| probable glycine betaine/carnitine/choline ABC transporter
           [Clostridium perfringens str. 13]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|150015221|ref|YP_001307475.1| inosine 5'-monophosphate dehydrogenase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149901686|gb|ABR32519.1| inosine-5'-monophosphate dehydrogenase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++++ R   V +  +  KL GIIT  DI    N+ + ++ +  +D +I       E
Sbjct: 108 DAENLMAQYRISGVPITTQDGKLIGIITNRDIIFETNYQRKISEVMTKDNLI----TASE 163

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A ++L++H +  L +VD   +  G++   D+ +
Sbjct: 164 NTTVEEAKEILKKHKVEKLPLVDSEGRLKGLITMKDIEK 202


>gi|311068012|ref|YP_003972935.1| putative oxidoreductase [Bacillus atrophaeus 1942]
 gi|310868529|gb|ADP32004.1| putative oxidoreductase [Bacillus atrophaeus 1942]
          Length = 149

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 8/106 (7%)

Query: 237 CPLID----AITILSEKRFGCVAVVDE-GQKLKGIITEGD-IFRNF-HKDLNTLSVEDVM 289
           C ++D    A   + +   G V VVDE G+ L GI+T+ D + R    K  N+  + D M
Sbjct: 15  CTVLDNVYEAAVKMKDADVGAVPVVDEDGETLVGIVTDRDLVLRGIASKRPNSQKITDAM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K P  + EDT +   + L+    +  + V  + +K +GIV   DL
Sbjct: 75  TKEPVSVEEDTSVDEVLHLMAARQLRRIPVTKN-KKLVGIVTLGDL 119


>gi|168185826|ref|ZP_02620461.1| glycine betaine transport ATP-binding protein opuAA [Clostridium
           botulinum C str. Eklund]
 gi|169295991|gb|EDS78124.1| glycine betaine transport ATP-binding protein opuAA [Clostridium
           botulinum C str. Eklund]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 61/115 (53%), Gaps = 5/115 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           ++ A D++      P+  +G   ++ A  I++E+    + VVD+   LKGI T  DI ++
Sbjct: 247 YIKAEDIIIEN---PVKAVGNRTILQASEIMAERHVDSILVVDKDNILKGIATLKDIRKS 303

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              D   L ++DVM  +   + +D  +   ++++   N+  + VVD+ +K +G++
Sbjct: 304 REND-KKLMLKDVMNSDVVCVNKDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLI 357


>gi|110801237|ref|YP_694991.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens ATCC 13124]
 gi|168204270|ref|ZP_02630275.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens E str. JGS1987]
 gi|168216379|ref|ZP_02642004.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens NCTC 8239]
 gi|110675884|gb|ABG84871.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens ATCC 13124]
 gi|170663942|gb|EDT16625.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens E str. JGS1987]
 gi|182381308|gb|EDT78787.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens NCTC 8239]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|313679266|ref|YP_004057005.1| RpiR family transcriptional regulator [Oceanithermus profundus DSM
           14977]
 gi|313151981|gb|ADR35832.1| transcriptional regulator, RpiR family [Oceanithermus profundus DSM
           14977]
          Length = 281

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 8/130 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R +I G+G S  I     + L   G P +    +        ++  DD+++ +S +G+S 
Sbjct: 134 RTLIIGVGTSAPIAQTFYNRLFRLGLPVWIQTDSYLQLMHAALLGPDDVVVGISQTGAST 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP--TTSAIMQL 183
           +    L  A++     +AIT    S +   AD+ L       S  H L P   +S I Q+
Sbjct: 194 DPVLTLEEAKKHGAATVAITGSLSSPITQQADVTLY------SSYHELRPEAASSRIAQI 247

Query: 184 AIGDALAIAL 193
           AI + + +AL
Sbjct: 248 AIVETIYVAL 257


>gi|308274798|emb|CBX31397.1| Inosine-5'-monophosphate dehydrogenase [uncultured Desulfobacterium
           sp.]
          Length = 501

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + ++ E R   V V  +G KL GI+T  D+   F  +L+   V DVM K+  V + + 
Sbjct: 123 EVVKLMEEYRISGVPVT-KGDKLVGIVTNRDL--RFETNLDK-KVCDVMTKDNLVTVSEG 178

Query: 301 L-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L  + +LL +H I  L+VVD   + +G++   D+ + 
Sbjct: 179 ISLEDSKKLLHEHRIEKLLVVDKKGRLVGMITIKDIEKI 217


>gi|169334239|ref|ZP_02861432.1| hypothetical protein ANASTE_00637 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258956|gb|EDS72922.1| hypothetical protein ANASTE_00637 [Anaerofustis stercorihominis DSM
           17244]
          Length = 181

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 10/149 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+  +G+G+SG +    A  L   G  ++ V            I   DL+++ S SG + 
Sbjct: 35  RIFTSGMGRSGFMMRGFAMRLMHMGYKTYVVGETTTPA-----ILEGDLLVLGSGSGKTS 89

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL---PKEPESCPHGLAPTTSAIMQ 182
            L A+   A+     +  I+S +K  +A  AD+V+T+    K+       + P  +   Q
Sbjct: 90  GLVAMAKKAKEMGAKIALISSNDKDGIAELADVVITVGAQTKDKSDSGSSIQPMGTLFEQ 149

Query: 183 --LAIGDALAIALLESRNFSENDFYVLHP 209
             L + D++ + ++E  +    + Y  H 
Sbjct: 150 GLLLVCDSVILDIMEDLDTDGAEMYKNHA 178


>gi|52078670|ref|YP_077461.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52784032|ref|YP_089861.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           licheniformis ATCC 14580]
 gi|319649053|ref|ZP_08003262.1| glucosamine-fructose-6-phosphate aminotransferase [Bacillus sp.
           BT1B_CT2]
 gi|73919646|sp|Q65P46|GLMS_BACLD RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|52001881|gb|AAU21823.1| L-glutamine-D-fructose-6-phosphate amidotransferase [Bacillus
           licheniformis ATCC 14580]
 gi|52346534|gb|AAU39168.1| GlmS [Bacillus licheniformis ATCC 14580]
 gi|317389047|gb|EFV69865.1| glucosamine-fructose-6-phosphate aminotransferase [Bacillus sp.
           BT1B_CT2]
          Length = 600

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 9/135 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           RV I   G S H   +G +   T A        VH A     ++ +++   L I +S SG
Sbjct: 292 RVYIIACGTSYHAGLVGKQFIETWAKVPAE---VHVASEFSYNMPLLSEKPLFIFISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L   ++     + +T+   S ++  AD  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVQVKKLGHKALTLTNVPGSTLSREADYTLLLNAGPEIA---VASTKAYTAQ 405

Query: 183 LAIGDALAIALLESR 197
           +A+   LA    ESR
Sbjct: 406 IAVLAILAAVTAESR 420


>gi|160901997|ref|YP_001567578.1| RpiR family transcriptional regulator [Petrotoga mobilis SJ95]
 gi|160359641|gb|ABX31255.1| transcriptional regulator, RpiR family [Petrotoga mobilis SJ95]
          Length = 283

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 41/151 (27%), Positives = 67/151 (44%), Gaps = 5/151 (3%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            K  ++ KN + Q  LR +   K G L S+ES+        F  A   I++ K R+ I G
Sbjct: 84  EKDITIFKNDSPQEILRKV---KLGSLKSIESTTSILDINNFLQAANFIRSAK-RIEIYG 139

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G S  +   L   L   G PS+ +            +   DL I +S SGS+ +    L
Sbjct: 140 VGSSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIGISQSGSTKDTVDSL 199

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTL 162
             A++     I++T    S +  ++D+VL +
Sbjct: 200 NVAKKHGATTISLTEHANSPITKYSDVVLEI 230


>gi|126275953|ref|XP_001386928.1| CBS domain-containing protein [Scheffersomyces stipitis CBS 6054]
 gi|126212797|gb|EAZ62905.1| CBS domain-containing protein [Pichia stipitis CBS 6054]
          Length = 609

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 49/89 (55%), Gaps = 3/89 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
           +++ +R  CV VV++  +L GI T  D+ FR     LN  +++++ +M  NP+    +  
Sbjct: 92  LMTARRENCVLVVNDVGELLGIFTAKDLAFRVVGSSLNANSVTIDQIMTPNPQCANANAA 151

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            + A+ L+ +     L V+DD  + +G++
Sbjct: 152 ASEALTLMVERGFRHLPVLDDNNQIVGVL 180


>gi|329938170|ref|ZP_08287621.1| inosine 5-monophosphate dehydrogenase [Streptomyces
           griseoaurantiacus M045]
 gi|329302659|gb|EGG46549.1| inosine 5-monophosphate dehydrogenase [Streptomyces
           griseoaurantiacus M045]
          Length = 500

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTDGAGKLLGIVTNRDMA--FEND-RSRRVSEVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGVDAMELLRRHKIEKLPLVDDQGVLKGLITVKDFVK 210


>gi|327310289|ref|YP_004337186.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326946768|gb|AEA11874.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 140

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 52/95 (54%), Gaps = 4/95 (4%)

Query: 246 LSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFH-KDLNTLSVEDV-MIKNPKVILEDTL 301
           ++    G + +VD  E +K  G+I+E DI R    K   T++V+    + N   I ED  
Sbjct: 27  MANNNVGLLVIVDPKEPKKPIGVISERDIIRTIAGKAPLTVTVDKAGTMGNFIWIREDET 86

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A  L+R+H+I  L+V+DD  + +G++   DL+
Sbjct: 87  IYRAAYLMRKHHIRHLVVLDDKGELVGVLSIRDLI 121


>gi|170078108|ref|YP_001734746.1| GGDEF domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169885777|gb|ACA99490.1| GGDEF domain protein [Synechococcus sp. PCC 7002]
          Length = 519

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 9/100 (9%)

Query: 245 ILSEKRFGCVAVVDEGQKLK------GIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVI 296
           ++ E R G + +V     L+      GI+TE DI   R+   DL  ++ E  M +  K+ 
Sbjct: 183 VMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAEQTMTRPIKIA 242

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +L+  A QL+ QH    L+VV +  + +G+V   +LL
Sbjct: 243 VHRSLIE-AKQLMEQHQTHRLIVVGEHHELLGLVTQSNLL 281



 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 62/122 (50%), Gaps = 8/122 (6%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAIT---ILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    + ++ + +++  +K  C L D  +    ++  R  C+ V+  GQ+L+GI+TE D+
Sbjct: 20  MLAAETTLLEAANTMASLKRTCELQDKTSDALEVNSSRASCILVM-AGQQLQGIVTERDL 78

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVA--MQLLRQHNISVLMVVDDCQKAIG 328
            +    D N   ++++ +M  +   +  D  LT     QLL++H I  L V+D   K  G
Sbjct: 79  LKWVILDQNWQQITLKQIMTTSVISLTWDQSLTPLHISQLLQKHRIRHLPVLDTEGKLFG 138

Query: 329 IV 330
           ++
Sbjct: 139 LI 140


>gi|14591537|ref|NP_143619.1| hypothetical protein PH1780 [Pyrococcus horikoshii OT3]
 gi|3258215|dbj|BAA30898.1| 285aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 285

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 52/111 (46%), Gaps = 3/111 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
           +P+VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    + +E
Sbjct: 73  VPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGVEIE 132

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +   ++ E T L  A++ L   N   L VVD     +GIV   DLLR
Sbjct: 133 PYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 183


>gi|169342960|ref|ZP_02863988.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens C str. JGS1495]
 gi|169298869|gb|EDS80943.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens C str. JGS1495]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|120402520|ref|YP_952349.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955338|gb|ABM12343.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 517

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  DL+   V +VM K P +  ++ +    A+ L
Sbjct: 137 RISGLPVVDDRGSLVGIITNRDM--RFEVDLSK-PVSEVMTKAPLITAQEGVSAEAALGL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L +VD   K  G++   D ++
Sbjct: 194 LRRNKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|146295312|ref|YP_001179083.1| signal-transduction protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145408888|gb|ABP65892.1| putative signal-transduction protein with CBS domains
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 123

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 11/105 (10%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVIL-- 297
           A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M    KV++  
Sbjct: 22  ALEQMQKRKKSVAVVVDENDFLKGIIVKADIYRFLSQPGHFETYPVELAM---TKVVITA 78

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D +  VA +LLR+++IS + V+D+  K IG+V   D++ + I
Sbjct: 79  DKNDDIKHVA-KLLRENDISAVPVLDNG-KVIGLVGLEDIVDYFI 121


>gi|114567034|ref|YP_754188.1| CBS domain-containing protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337969|gb|ABI68817.1| CBS domain protein [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 219

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 5/97 (5%)

Query: 229 SIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           S+P++ K  C + DAI  L  +  G + VVDE + L GI++  D  +      D++ + V
Sbjct: 86  SLPVIMKESCSIYDAIVTLFIEDTGSIFVVDENKYLSGIVSRKDFLKTTIGQADIHKVPV 145

Query: 286 EDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVV 320
             +M + P ++    D  +  A++ + +H +  L VV
Sbjct: 146 SVIMTRMPNIVTAALDETVVAAIKKIVEHEVDSLPVV 182


>gi|255326907|ref|ZP_05367983.1| transcriptional regulator, RpiR family protein [Rothia mucilaginosa
           ATCC 25296]
 gi|255296124|gb|EET75465.1| transcriptional regulator, RpiR family protein [Rothia mucilaginosa
           ATCC 25296]
          Length = 272

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/125 (23%), Positives = 58/125 (46%), Gaps = 11/125 (8%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           +  +T+DD++I++S+SG ++ ++  +       IP+IA+T+   + ++ HA+  L     
Sbjct: 157 MNNMTQDDVVIIVSFSGQTENMREHIKMLALRRIPMIAVTAIGVNYMSSHAEYSLHYQTT 216

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
           P        P  S +    + D +    +E   F EN+        +  +L     DV++
Sbjct: 217 PTQISTQRKPYYSFVALSVLLDYIVRRYIE---FVENE--------RRESLQDQVDDVLN 265

Query: 226 SGDSI 230
           SG  I
Sbjct: 266 SGGEI 270


>gi|170755382|ref|YP_001780708.1| CBS domain-containing protein [Clostridium botulinum B1 str. Okra]
 gi|237794370|ref|YP_002861922.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
 gi|169120594|gb|ACA44430.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
 gi|229264170|gb|ACQ55203.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 126

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A+ +++E       V DE   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 22  ALNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 82  EDVISIAKKILDK-DIIAMPIVDSSKKLLGIVSIEDILK 119


>gi|116249833|ref|YP_765671.1| CBS domain-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 222

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 48/107 (44%), Gaps = 24/107 (22%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNF-----------------------HKDLNTLSVEDVMI 290
           V V+D+  +L GII+EGD+ R                         +   N   V DVM 
Sbjct: 35  VPVIDDAGRLVGIISEGDLLRRTELGREATAELGTSALTAEEKATAYVRSNAWRVADVMS 94

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +P V+  DT L     L+++H+I  L V+ D    +GIV   DLL+
Sbjct: 95  CDPIVVEGDTSLARVSALMQEHHIKRLPVMRDGV-LVGIVSRADLLK 140


>gi|91788058|ref|YP_549010.1| signal transduction protein [Polaromonas sp. JS666]
 gi|91697283|gb|ABE44112.1| putative signal transduction protein with CBS domains [Polaromonas
           sp. JS666]
          Length = 170

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILE 298
           A   + E   G + V D G+KL G++T+ DI  R   ++L+  T  + D+M  N +   E
Sbjct: 24  AARAMDELNVGVIPVCD-GEKLVGMVTDRDIVVRGVAQELDAKTTDLSDLMSTNVRTARE 82

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +  + +  I  L VVDD  + +GI+   D+
Sbjct: 83  NEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGDI 119


>gi|308459751|ref|XP_003092189.1| hypothetical protein CRE_16454 [Caenorhabditis remanei]
 gi|308254030|gb|EFO97982.1| hypothetical protein CRE_16454 [Caenorhabditis remanei]
          Length = 484

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 12/137 (8%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K G+  +CASD++ SG  +  V I   +++    L + R   V V+D+ +++  II+   
Sbjct: 241 KEGSNVLCASDIL-SGSQLVSVSISSKILELCEELHQNRLHRVVVLDDSKEVVNIISVRR 299

Query: 272 IFRNFHKDLNTLSVEDVMIK-----------NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +    HK   +L     + K           N  VI E   +  AM+ +   + + L VV
Sbjct: 300 VLAAIHKQNRSLHFAQWLSKPIGMSAIGTWENVAVISETETVYRAMEDMLGFHYTALPVV 359

Query: 321 DDCQKAIGIVHFLDLLR 337
           +  Q+ IG++   D+ +
Sbjct: 360 NSKQEVIGVITKTDICK 376


>gi|168212558|ref|ZP_02638183.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens CPE str. F4969]
 gi|170715729|gb|EDT27911.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens CPE str. F4969]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 62/121 (51%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + ++ ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRALSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|32266201|ref|NP_860233.1| inosine 5'-monophosphate dehydrogenase [Helicobacter hepaticus ATCC
           51449]
 gi|32262251|gb|AAP77299.1| Inosinic acid dehydrogenase GuaB [Helicobacter hepaticus ATCC
           51449]
          Length = 481

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++    L DA +I    +   V VVDE  KL GI+T  D+   F +DL+   V D+M K+
Sbjct: 99  IRANNTLADAKSITDNYKISGVPVVDEYGKLIGILTNRDM--RFEQDLSKY-VGDLMTKD 155

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  +  T L  A +++ ++ I  L +VD+     G++   D+ +
Sbjct: 156 SLVTAKVGTTLEEAKEIMHKNRIEKLPIVDENYMLKGLITIKDIQK 201


>gi|19552508|ref|NP_600510.1| signal-transduction protein [Corynebacterium glutamicum ATCC 13032]
 gi|62390174|ref|YP_225576.1| signal transduction protein [Corynebacterium glutamicum ATCC 13032]
 gi|21324056|dbj|BAB98681.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Corynebacterium glutamicum ATCC 13032]
 gi|41325510|emb|CAF19990.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domain [Corynebacterium glutamicum ATCC 13032]
          Length = 622

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 262 KLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +LKGIIT+ D+  R   KDL+  L V +VM  +P+      L   AM L+ +  I  L +
Sbjct: 196 ELKGIITDRDMRSRVVAKDLDIQLPVSEVMTVDPRCATSQGLAFEAMLLMSELRIHHLPI 255

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VDD Q + GIV   D++R 
Sbjct: 256 VDDGQIS-GIVTAADIMRL 273


>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
          Length = 244

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 8/110 (7%)

Query: 178 SAIMQLAIGDALAIALLESRN-----FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +AI Q+      A+ +++S+N     FSE D+        L +      DVM +   +  
Sbjct: 118 TAIKQMHTNKVGAVIVVDSQNKMTGIFSERDYLNSLAVRDLKSKDTYVKDVMTT--PVVT 175

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V++       + I+S++RF  + V+D G KL GI++ GDI ++   D  T
Sbjct: 176 VRLDTSTAKCMKIMSQRRFRHLPVID-GDKLVGIVSIGDIVKHIISDQRT 224



 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLS--VEDVMIKNPKV 295
           ++ AI  +   + G V VVD   K+ GI +E D   +   +DL +    V+DVM      
Sbjct: 116 VLTAIKQMHTNKVGAVIVVDSQNKMTGIFSERDYLNSLAVRDLKSKDTYVKDVMTTPVVT 175

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  DT     M+++ Q     L V+ D  K +GIV   D+++
Sbjct: 176 VRLDTSTAKCMKIMSQRRFRHLPVI-DGDKLVGIVSIGDIVK 216


>gi|229155853|ref|ZP_04283954.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|228627460|gb|EEK84186.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 4342]
          Length = 202

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++++ ++I +S SGS+  L   L  AR     +IAITS  KS ++  ADI  TL    
Sbjct: 94  GLLSKNSVVIGISHSGSNKGLLEALEIARARGAKIIAITSYQKSALSQLADI--TLYTSI 151

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIAL 193
                    ++S + QL++ D L + L
Sbjct: 152 RETDFRTEASSSRLAQLSLLDTLYVGL 178


>gi|304315006|ref|YP_003850153.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588465|gb|ADL58840.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 515

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 2/85 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VVD    L+GI+T  DI     +   +L  +DVM +   V  E+  + V  + + ++N
Sbjct: 422 IPVVDSQGILRGIVTSWDIADAVARGKKSL--KDVMTRRVIVARENEPVDVVARRIDKYN 479

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           IS L +VD+  +  GI+   D+ R 
Sbjct: 480 ISGLPIVDEENRVKGIITAEDISRL 504


>gi|296179471|gb|ADG96477.1| inosine-5-monophosphate dehydrogenase [Gordonia cholesterolivorans]
          Length = 503

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VVD    L GIIT  D+   F  D  T  V +VM   P +   E      A+ L
Sbjct: 127 RISGLPVVDASGDLVGIITNRDM--RFEAD-ETRPVSEVMTPAPLITASEGVSAEAALGL 183

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 184 LRRHKIEKLPIVDGNGKLTGLITVKDFVK 212


>gi|302875785|ref|YP_003844418.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
 gi|307689220|ref|ZP_07631666.1| inosine 5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
 gi|302578642|gb|ADL52654.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 55/103 (53%), Gaps = 4/103 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVIL 297
           L +A  ++++ R   V +VD+ +KL GI+T  D+   F  DL+   V DVM + N    L
Sbjct: 106 LKEADQLMAKYRISGVPIVDQDRKLVGIVTNRDML--FVDDLSQ-KVGDVMTRENLITAL 162

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           E T +  A ++L ++ I  L +VD+     G++   D+ +  I
Sbjct: 163 EGTSIEEAKKILMKNKIEKLPLVDENNVLKGLITIKDIEKVRI 205


>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
 gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
           autotrophicus Py2]
          Length = 143

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 4/101 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLS--VEDVMIKNPKVIL 297
           DA+  L+ +R G + VVD+   ++GII+E D+ R    + +N L+  +  VM +      
Sbjct: 25  DAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVNVLAEPLSSVMTRAVVTCT 84

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D  + V M+ + +     + VV    K +GI+   D+++F
Sbjct: 85  PDETVPVIMERMTRGRFRHVPVVSG-DKLVGIISIGDVVKF 124


>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 149

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 28/120 (23%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------------RNFHKDL 280
           IL++ R   V VVD+  KL G++TE D+                         R F+++L
Sbjct: 26  ILADNRISGVPVVDDAGKLVGVVTESDLMIKARDLELPFYITLFDSIIFLQSPRRFNEEL 85

Query: 281 NTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +   V+D+M      + EDT L    +L+   +I+ + VV D  K +GIV   D++R
Sbjct: 86  KRFTASKVKDIMTTQVAAVDEDTPLFDIARLMTAKSINRVPVVRDG-KVVGIVTRNDVVR 144


>gi|254513226|ref|ZP_05125291.1| bifunctional protein glk [Rhodobacteraceae bacterium KLH11]
 gi|221532230|gb|EEE35226.1| bifunctional protein glk [Rhodobacteraceae bacterium KLH11]
          Length = 320

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 14/138 (10%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLAST-----GTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + +++  GIG     GS L +  AS      G PSFFV+ +         +  +D++ ++
Sbjct: 160 RRQILFAGIGG----GSSLVAQEASNRFFRLGIPSFFVNDSYVLQMRAAALGLEDVLFLV 215

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT-LPKEPESCPHGLAPTT 177
           S SG +D + +    A  +    I+IT  N  +       +LT LP++ +       PT 
Sbjct: 216 SASGEADAIVSAAEVANGYGATTISITKPNTRLSDISKIALLTELPEDSDI----YKPTA 271

Query: 178 SAIMQLAIGDALAIALLE 195
           S    LAI DALA+ + +
Sbjct: 272 SRYAHLAIVDALAMTVAQ 289


>gi|218960659|ref|YP_001740434.1| hypothetical protein CLOAM0322 [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729316|emb|CAO80227.1| hypothetical protein CLOAM0322 [Candidatus Cloacamonas
           acidaminovorans]
          Length = 299

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + D+M++NP  +L    L   + L+  H ++ + VVD+  K +G V+ L+LL  GI
Sbjct: 157 IADIMVQNPIAVLPQNSLRELINLMSTHKVAGMPVVDETGKYVGEVNVLNLLEVGI 212


>gi|291296644|ref|YP_003508042.1| magnesium transporter [Meiothermus ruber DSM 1279]
 gi|290471603|gb|ADD29022.1| magnesium transporter [Meiothermus ruber DSM 1279]
          Length = 454

 Score = 38.9 bits (89), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + + ++   D M   +    ++   P  DA      ++   + VVD  + L+G++T 
Sbjct: 140 GGIMTSEYIAVRDSMRVEEVFRFLRREAP--DA------EQIYVIYVVDAEEHLQGVLTL 191

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+      D  T   E   I NP VI   +DT      +L+  +N +VL VVD+ +K +
Sbjct: 192 RDLI---VADPKTRVAE---IMNPDVIYVRDDTDQEEVARLMADYNFTVLPVVDEDKKLV 245

Query: 328 GIVHFLDLL 336
           GIV   D++
Sbjct: 246 GIVTIDDVV 254


>gi|315660310|ref|ZP_07913164.1| glutamine-fructose-6-phosphate transaminase [Staphylococcus
           lugdunensis M23590]
 gi|315494647|gb|EFU82988.1| glutamine-fructose-6-phosphate transaminase [Staphylococcus
           lugdunensis M23590]
          Length = 607

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 12/172 (6%)

Query: 16  HSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           H ++K    Q A +R II E +          G+ + +    + K  A   R+ I   G 
Sbjct: 257 HYMLKEINDQPAVMRRIIQEYQ---------DGQGNLKIDADIVKDVAEADRIYIIAAGT 307

Query: 75  SGHIGSKLASTLAS-TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           S H G      L    GTP+  VH A     +  ++++  L I +S SG + + +A+L  
Sbjct: 308 SYHAGLVGKEYLEKWAGTPTE-VHVASEFVYNTPLLSKKPLFIYISQSGETADSRAVLVE 366

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + R     + IT+   S ++  AD  L L   PE         T+ I  LAI
Sbjct: 367 SNRLGHKALTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLAI 418


>gi|45656159|ref|YP_000245.1| hypothetical protein LIC10254 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599392|gb|AAS68882.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 206

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 82/177 (46%), Gaps = 18/177 (10%)

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG-----KLGTLFVCASDVMH 225
           H ++P TS   +L  GD L   L +  +        L   G      L TL   A D+M 
Sbjct: 26  HSISPNTST-KKLETGDNLEYKLEKGIHSEYKSNSSLRKSGLNSIESLSTLM--AKDLMT 82

Query: 226 SGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLN 281
           S    P+V      P+  A  I  +KRF  V V+++   L GI+++ D   +R  H    
Sbjct: 83  S----PVVSFLEDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMRWRLEHNPDT 138

Query: 282 TLSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T ++ ++M  K   V +   +L ++ ++L +  I  L +++D  + IGI+   D+LR
Sbjct: 139 TQTIGEIMKTKILSVQIHARILEIS-KVLFEERIGCLPIINDKIEVIGIITRSDILR 194


>gi|326333121|ref|ZP_08199370.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
 gi|325949104|gb|EGD41195.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
          Length = 499

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 9/98 (9%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM-----IKNPKVILED 299
           +  E R     VVD  QKL GIIT  D+      +  T  V +VM     I  P  I  +
Sbjct: 115 LAGEYRISGFPVVDVDQKLIGIITNRDLRFTPVAEWATTKVNEVMTSKDLITGPAEISRE 174

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                A +LLRQH +  L +VD   +  G++   D ++
Sbjct: 175 E----ATKLLRQHKLERLPLVDTDGRITGLITVKDFVK 208


>gi|125624136|ref|YP_001032619.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492944|emb|CAL97907.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070910|gb|ADJ60310.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 273

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 6/103 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSWSGS 123
           + I G+G SG+    L +     G P   V A   SH  L    ++ + DLII +S SG 
Sbjct: 125 IYIFGVGLSGNTAKDLEAMFLRIGVP---VKAISDSHFQLQTADLLKKTDLIIGISLSGK 181

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           + EL   +  A+     +I ITS + S +A  +DI L    E 
Sbjct: 182 TLELFESIKIAKEQKAQIITITSSDYSPLAQLSDINLQTVNEE 224


>gi|302039062|ref|YP_003799384.1| hypothetical protein NIDE3783 [Candidatus Nitrospira defluvii]
 gi|300607126|emb|CBK43459.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 157

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 2/102 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILE 298
           D +  L  K    V VVD+ ++L G+++E D+       +  +  + +D+M +NP  +  
Sbjct: 45  DRVAKLLLKEGSHVPVVDQAKQLAGVVSEHDLLSALDEGQAWSAQTAKDLMTENPYSVPP 104

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +T L+  + +L + ++  + VV    + +G+V   D++R  +
Sbjct: 105 ETSLSTLIHVLTESDLMSVPVVTAQNRLVGVVTRRDVVRAAL 146


>gi|289550226|ref|YP_003471130.1| Glucosamine-fructose-6-phosphate aminotransferase (isomerizing)
           [Staphylococcus lugdunensis HKU09-01]
 gi|289179758|gb|ADC87003.1| Glucosamine-fructose-6-phosphate aminotransferase (isomerizing)
           [Staphylococcus lugdunensis HKU09-01]
          Length = 601

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 12/172 (6%)

Query: 16  HSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           H ++K    Q A +R II E +          G+ + +    + K  A   R+ I   G 
Sbjct: 251 HYMLKEINDQPAVMRRIIQEYQ---------DGQGNLKIDADIVKDVAEADRIYIIAAGT 301

Query: 75  SGHIGSKLASTLAS-TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           S H G      L    GTP+  VH A     +  ++++  L I +S SG + + +A+L  
Sbjct: 302 SYHAGLVGKEYLEKWAGTPTE-VHVASEFVYNTPLLSKKPLFIYISQSGETADSRAVLVE 360

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + R     + IT+   S ++  AD  L L   PE         T+ I  LAI
Sbjct: 361 SNRLGHKALTITNVAGSTLSREADHTLLLHAGPEIAVASTKAYTAQIAVLAI 412


>gi|224543509|ref|ZP_03684048.1| hypothetical protein CATMIT_02718 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523636|gb|EEF92741.1| hypothetical protein CATMIT_02718 [Catenibacterium mitsuokai DSM
           15897]
          Length = 277

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 46/102 (45%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V + G+G S  +       L   G  + F          +  +T +DL I +S+SG +  
Sbjct: 129 VYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEEDLAIFVSYSGETKG 188

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +     +A+  +IP +AIT    + +    D VLT+P + +S
Sbjct: 189 IVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQS 230


>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
 gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
          Length = 227

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 31/140 (22%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D M + D++ +V+   P+  A+ +L + R     VVD+   L G++++ D+         
Sbjct: 68  DFMTTRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLALDSMSGN 127

Query: 273 ----------------FRNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLR 310
                           ++ FH+    LS      + DVM  +P  +  +T L  A +LL 
Sbjct: 128 ELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLDAATRLLL 187

Query: 311 QHNISVLMVVDDCQKAIGIV 330
           +     L VVD   K +G++
Sbjct: 188 ETKYRRLPVVDSMGKLVGMI 207


>gi|320580871|gb|EFW95093.1| hypothetical protein HPODL_3465 [Pichia angusta DL-1]
          Length = 624

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKNPKVIL 297
           +A  ++S  +  CV VVDE   L GI T  D+ FR    +LN    +++ +M  NP    
Sbjct: 96  EAAQLMSVTKENCVLVVDEDGLLSGIFTAKDLAFRIVGANLNANQTTIDQIMTPNPMCAK 155

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             TL + A+ L+       L VV++  + +G++
Sbjct: 156 VSTLASDALSLMVNKGFRHLPVVNEGNQIVGVL 188


>gi|288554615|ref|YP_003426550.1| inosine 5'-monophosphate dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545775|gb|ADC49658.1| inosine 5'-monophosphate dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA  ++ + R   V +VDE QKL GI+T  D+   F +D  ++ +++VM K   V   
Sbjct: 108 VFDAEHLMGKYRISGVPIVDEEQKLVGILTNRDL--RFIEDY-SIHIDEVMTKEDLVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A  +L+++ I  L +VDD     G++   D+
Sbjct: 165 VGTTLQEAESILQKYKIEKLPLVDDEGVLKGLITIKDI 202


>gi|257468646|ref|ZP_05632740.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
 gi|317062903|ref|ZP_07927388.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
 gi|313688579|gb|EFS25414.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
          Length = 484

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 31/51 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E  MI+NP  + ED  +  A  L+R++ IS L V++D  + IGIV   D+
Sbjct: 90  IESGMIRNPVTLKEDCTVGFAEDLMRRYKISGLPVIEDDGRLIGIVTNRDI 140


>gi|167549396|ref|ZP_02343155.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205325202|gb|EDZ13041.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRTGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|150402185|ref|YP_001329479.1| signal transduction protein [Methanococcus maripaludis C7]
 gi|150033215|gb|ABR65328.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 412

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 76/159 (47%), Gaps = 15/159 (9%)

Query: 190 AIALLESRNF------SENDFYVLHPGGKL--GTLFVCASDVMHSGDSIPL-VKIGCPLI 240
           A+ ++E+R F       ++D Y++     L   ++     D+M      P  V++   ++
Sbjct: 25  AVGIMENRKFHNLIIEKDDDIYLVTMHDLLLGNSVHQQVEDLMFK----PYCVRMNTQVL 80

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           DA   +         V++E  KL GIIT+ D+ R   +   L  + ++ +M K+P  I  
Sbjct: 81  DAAFEMINSGQRVAPVINENDKLIGIITDYDVMRCASQSELLKDVKIDKIMTKSPVTIDI 140

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +  A  L+ ++NI  L+V+D     +G+V   D+++
Sbjct: 141 DESIGKARSLMMKYNIGRLIVLDTEGNPMGMVTEDDIVK 179


>gi|325108885|ref|YP_004269953.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis
           DSM 5305]
 gi|324969153|gb|ADY59931.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis
           DSM 5305]
          Length = 497

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A  ++ E+  G + + ++G KLKGI+T  D+ R    D  +  + +VM K   V   E 
Sbjct: 109 EARQMMDERNVGGIPITEDG-KLKGILTRRDL-RFLETD--STQIAEVMTKEGLVTAPET 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A ++LR++ +  L++V+D  +  G++   D+
Sbjct: 165 TDLKEAERILRENKVEKLLLVNDRYELRGLITIKDI 200


>gi|299068305|emb|CBJ39527.1| conserved protein of unknown function
           (cystathionine-beta-synthase-CBS domain) [Ralstonia
           solanacearum CMR15]
          Length = 378

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 8/64 (12%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R FH    TL+  D+M   P V+      +V  A++LL++H +  L V+DD ++ IGIV 
Sbjct: 230 RTFH----TLTCADIM--TPSVVTASAATSVPHALRLLQRHGVKALPVIDDDRRLIGIVT 283

Query: 332 FLDL 335
             DL
Sbjct: 284 RADL 287


>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
 gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
          Length = 144

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTL 283
           DS+  VK G  + +A  +LSEKR G + +  +G+   GI++E DI R         LN +
Sbjct: 13  DSVTTVKPGVLISEAAKMLSEKRIGTLVICSDGKTPDGILSERDIVRALGVQGDACLN-M 71

Query: 284 SVEDVMIKN 292
           +VE +M K 
Sbjct: 72  TVESLMTKE 80


>gi|219852650|ref|YP_002467082.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
           E1-9c]
 gi|219546909|gb|ACL17359.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
           E1-9c]
          Length = 490

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 22/86 (25%), Positives = 45/86 (52%), Gaps = 1/86 (1%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            G V V+D+ Q++ GI++  D+ R         S+  +M K P    E+  +  A++++ 
Sbjct: 122 IGGVPVLDDDQRIIGIVSRRDV-RAIVSKRGAESIRTIMTKQPITTGENINIDDALEVMY 180

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +  L VV+  ++ +GI+   D+L
Sbjct: 181 TNKVERLPVVNSEKRLLGIITMQDIL 206


>gi|15679010|ref|NP_276127.1| inosine-5'-monophosphate dehydrogenase related protein IX
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622093|gb|AAB85489.1| inosine-5'-monophosphate dehydrogenase related protein IX
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 284

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 242 AITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           A+ ++ +K    + VV +G ++L GIIT  D+  N  ++   L    +M +NP  +  D 
Sbjct: 26  ALELMRKKNVSGLPVVKKGTEELVGIITRSDLVENPDEEQIVL----IMTRNPVTVSPDD 81

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + VA + + ++NI  + VV D  + +GIV   DL+
Sbjct: 82  DVRVAAERMLENNIRRVPVV-DGDRLVGIVTSYDLV 116


>gi|16125864|ref|NP_420428.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           CB15]
 gi|221234626|ref|YP_002517062.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13423018|gb|AAK23596.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           CB15]
 gi|220963798|gb|ACL95154.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           NA1000]
          Length = 487

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 19/100 (19%)

Query: 245 ILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           I + ++     VV+ G  KL GI+T  D+   F  D          +   +++  D L+T
Sbjct: 110 IKARRKISGFPVVERGSGKLVGILTNRDM--RFEGDDK--------VPASQLMTRDNLIT 159

Query: 304 V--------AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V        A +LLR+H I  L+VVD+  +A+G++   D+
Sbjct: 160 VSEGVDHREARELLRRHKIERLIVVDEAYRAVGLITVKDI 199


>gi|313893298|ref|ZP_07826873.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442194|gb|EFR60611.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 484

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  I+ + +   V + + G KL GIIT  D+   F  DL T  + D M K+  V   
Sbjct: 108 LSDAAEIMEKYKISGVPITEHG-KLVGIITNRDM--RFETDL-TRQIGDCMTKDSLVTAP 163

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E T L  A  +L +H I  L +VDD     G++   D+
Sbjct: 164 EGTSLEEAKAILSEHRIEKLPLVDDDGNLKGLITIKDI 201


>gi|237752085|ref|ZP_04582565.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376652|gb|EEO26743.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 483

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVDE   L GI+T  D+   F  DL T  V+DVM K P +   
Sbjct: 105 LADAKEITDNYKISGVPVVDEHGSLIGILTNRDM--RFETDL-TRPVKDVMTKAPLITGR 161

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A  ++ +H I  L +V++     G++   D+ +
Sbjct: 162 VGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQK 201


>gi|297853268|ref|XP_002894515.1| CLC-F [Arabidopsis lyrata subsp. lyrata]
 gi|297340357|gb|EFH70774.1| CLC-F [Arabidopsis lyrata subsp. lyrata]
          Length = 781

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 52/129 (40%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE 286
           V  G  L +A  IL++    C+ VVD+ + L GI+T GDI R          D NT  V 
Sbjct: 628 VSSGTTLREARNILNDSHQNCLMVVDDDEFLAGILTHGDIRRYLSNNVSTIFDENTCPVS 687

Query: 287 DVMIKNPK---------VILEDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGI 329
            V  K                D  + VA +L+    +  L VV   +        K +G+
Sbjct: 688 SVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGL 747

Query: 330 VHFLDLLRF 338
           +H+  +  F
Sbjct: 748 LHYDSIWSF 756


>gi|283852449|ref|ZP_06369718.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
 gi|283572187|gb|EFC20178.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
          Length = 255

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 23/91 (25%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKV 295
           P+ +A+ ++ E+R   +AVVD G  L G++T+ ++      D  + +++   +M  +   
Sbjct: 84  PVSEAVKLMLERRVRHLAVVDFGGSLLGLVTDKELVDALAVDFMVESVTCRQLMRPDTAA 143

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +  D  +  A+ L+R  N+  ++VV D + A
Sbjct: 144 LPPDRPVREALALMRLRNVGCILVVADGRPA 174


>gi|229138971|ref|ZP_04267549.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST26]
 gi|228644511|gb|EEL00765.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST26]
          Length = 136

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S  GS+  L   L  AR     +IAITS  KS ++  ADI L T  +E
Sbjct: 28  GLLSKNSVVIGISHPGSNKRLLEALEIARARGAKIIAITSYQKSALSQLADITLYTSTRE 87

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 88  TEFRTEA---SSSRLAQLSLLDTLYVGL 112


>gi|226309601|ref|YP_002769495.1| inosine-5'-monophosphate dehydrogenase [Brevibacillus brevis NBRC
           100599]
 gi|226092549|dbj|BAH40991.1| inosine-5'-monophosphate dehydrogenase [Brevibacillus brevis NBRC
           100599]
          Length = 486

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A  ++ + R   V +VD  QKL GI+T  D+   F  D  ++ +++VM K   V     
Sbjct: 110 EANALMGKYRISGVPIVDANQKLIGILTNRDL--RFVHDF-SIKIKEVMTKENLVTAPVG 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  +L+QH I  L +VD+     G++   D+
Sbjct: 167 TTLQQAELILQQHKIEKLPLVDENNTLRGLITIKDI 202


>gi|162149597|ref|YP_001604058.1| hypothetical protein GDI_3836 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209544828|ref|YP_002277057.1| CBS domain-containing protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161788174|emb|CAP57779.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209532505|gb|ACI52442.1| CBS domain containing protein [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 158

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 5/98 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKN-PKVILEDT 300
           +L+  R G V VVD    + G+++E  I     +   +++ L   D+M  + P     + 
Sbjct: 31  LLTHNRIGAVPVVDGTGHVVGLVSERSIVGALARHGAEIDRLCASDIMTHDVPTARRSED 90

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L+VA ++ R H+  V  V+DD    +G+V   D+++ 
Sbjct: 91  ILSVARKMTRSHSRHV-PVLDDAGHLVGLVSIGDIVKL 127


>gi|310657610|ref|YP_003935331.1| imp dehydrogenase [Clostridium sticklandii DSM 519]
 gi|308824388|emb|CBH20426.1| IMP dehydrogenase [Clostridium sticklandii]
          Length = 487

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVIL 297
           L +A +++   R   V +VDE  KL GI+T  DI   F  D  T  +E+ M  +N    L
Sbjct: 106 LGEADSLMGRYRISGVPIVDEQDKLIGILTNRDI--RFETDF-TKKIEEAMTSENLITAL 162

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E   L  A  +L +H I  L +VD      G++   D+ +
Sbjct: 163 EGVSLEEAQHILAKHKIEKLPIVDKDGYLKGLITIKDIEK 202


>gi|301154709|emb|CBW14172.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 288

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 53  FHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLG 107
           F    E +KAI+   RV + G+G SG       + L   G     V A   +H       
Sbjct: 123 FEQLEEAVKAIQQANRVFLFGVGTSGITAEDAKNKLMRIGVQ---VDATGNNHFMYMQAS 179

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           ++T+ D+ I LS SG S E    +  A+      IAIT   +S +  +AD+VL
Sbjct: 180 LLTKKDVAIGLSHSGYSQETTHTMKIAKENGAKTIAITHSLRSPITEYADLVL 232


>gi|16765892|ref|NP_461507.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167992703|ref|ZP_02573799.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243362|ref|ZP_02668294.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168261377|ref|ZP_02683350.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|194448429|ref|YP_002046634.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|16421119|gb|AAL21466.1| putative ABC superfamily transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|194406733|gb|ACF66952.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205329082|gb|EDZ15846.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337647|gb|EDZ24411.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205349631|gb|EDZ36262.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|261247767|emb|CBG25595.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994698|gb|ACY89583.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301159120|emb|CBW18634.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913561|dbj|BAJ37535.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321222723|gb|EFX47794.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130903|gb|ADX18333.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332989499|gb|AEF08482.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|76802885|ref|YP_330980.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558750|emb|CAI50343.1| CBS domain protein 1 [Natronomonas pharaonis DSM 2160]
          Length = 381

 Score = 38.9 bits (89), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VA V E   L G+IT+  I      +L+ L+V+ +  +    + ED  L  A+  LR++ 
Sbjct: 94  VAPVFEHGDLWGVITDNAILNAVLDNLDVLTVDQIHTEEVVTLREDDTLGKAINHLRENA 153

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           IS L VV+D  K  GI+   D+  F +
Sbjct: 154 ISRLPVVNDNGKLTGIITTHDIADFAV 180


>gi|332974599|gb|EGK11519.1| transcriptional regulator HexR [Kingella kingae ATCC 23330]
          Length = 283

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 3/86 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +++  D+++V+S SGSS E+   +  A+     +IAIT  + S +A  AD VL L  + +
Sbjct: 171 VLSSHDVLVVISNSGSSIEVLDAVSIAKENGAQVIAITRSD-SPLAQLADCVLALVVQED 229

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIAL 193
           S  +   P  S ++QLAI D LAI L
Sbjct: 230 SNRY--TPMISRLLQLAIIDILAIGL 253


>gi|302878069|ref|YP_003846633.1| response regulator receiver modulated diguanylate
           cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Gallionella capsiferriformans ES-2]
 gi|302580858|gb|ADL54869.1| response regulator receiver modulated diguanylate
           cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Gallionella capsiferriformans ES-2]
          Length = 1275

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA   +++ R   V +V E +   GI+TE DI R F +D     + +VM K    +   T
Sbjct: 150 DAANAMTKSRTDYV-LVGENRCTTGILTERDIVRLFGQDDPRRVLREVMSKPVAKVARQT 208

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A + ++   I  L+V DD  + IG++   D+++
Sbjct: 209 QLKDAAKKMQDEGIRRLVVEDDAGQVIGVLTEHDVVK 245


>gi|242371967|ref|ZP_04817541.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
 gi|242350330|gb|EES41931.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
          Length = 293

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 1/123 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G G S  + + L   L+  G     V         L      D ++ ++ +G   E
Sbjct: 135 IFIYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSE 194

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +++I      + IP++ ITS + + VA  +DI+L+  +  E+    +  TTS   Q+   
Sbjct: 195 MRSIAKVVSDYHIPVVTITSTSDNPVAKRSDIILSYGQTDEN-EMRMGATTSLFAQMFTI 253

Query: 187 DAL 189
           D L
Sbjct: 254 DVL 256


>gi|254381615|ref|ZP_04996979.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340524|gb|EDX21490.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 218

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 17/120 (14%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSV---- 285
             P  +    L+E +   V V+D   +  G+I+E D+        ++++ L         
Sbjct: 20  NAPFKEIARTLTEHKVSAVPVIDSAGRPLGVISERDLLPKSAGQSDYYRSLPEREAWQEA 79

Query: 286 -------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  E++M   P     D  +  A +L+    +  L+VVDD     GIV   DLLR 
Sbjct: 80  KAAGTRAEELMSSPPVCARPDWTVAEAARLMEAQGVKRLLVVDDADVLTGIVSRRDLLRI 139


>gi|23098068|ref|NP_691534.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
 gi|22776293|dbj|BAC12569.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           + + D++I +S SG + ++  +   A+R  + +IAIT+ +KS +   ADI L  P     
Sbjct: 176 LKKTDVLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNLDKSPLYKVADIHLCTPTVEHD 235

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESR 197
              G  P  S + QL + DAL +++  S+
Sbjct: 236 FRIGSIP--SRMTQLTVIDALYLSIFHSK 262


>gi|16761484|ref|NP_457101.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140819|ref|NP_804161.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62181137|ref|YP_217554.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|168232150|ref|ZP_02657208.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168238317|ref|ZP_02663375.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168821438|ref|ZP_02833438.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194444928|ref|YP_002041835.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194471434|ref|ZP_03077418.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737916|ref|YP_002115635.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|198242293|ref|YP_002216639.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205353668|ref|YP_002227469.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857979|ref|YP_002244630.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213023047|ref|ZP_03337494.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213052949|ref|ZP_03345827.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213417147|ref|ZP_03350291.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213619370|ref|ZP_03373196.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213646362|ref|ZP_03376415.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582886|ref|YP_002636684.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912690|ref|ZP_04656527.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289811422|ref|ZP_06542051.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
 gi|25303542|pir||AB0828 probable transcription regulator yfhH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503784|emb|CAD02774.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136444|gb|AAO68010.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62128770|gb|AAX66473.1| putative ABC superfamily (membrane) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|194403591|gb|ACF63813.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194457798|gb|EDX46637.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713418|gb|ACF92639.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197288873|gb|EDY28246.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197936809|gb|ACH74142.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205273449|emb|CAR38426.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205333627|gb|EDZ20391.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205342035|gb|EDZ28799.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|206709782|emb|CAR34134.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467413|gb|ACN45243.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|320087073|emb|CBY96842.1| Bifunctional protein glk Includes: Glucokinase; Glucose kinase;
           Includes: RecName: Full=putative HTH-type
           transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322613342|gb|EFY10284.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620454|gb|EFY17319.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322625078|gb|EFY21907.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629478|gb|EFY26254.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633865|gb|EFY30604.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635471|gb|EFY32182.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322639853|gb|EFY36532.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644261|gb|EFY40805.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649953|gb|EFY46373.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654864|gb|EFY51181.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658208|gb|EFY54474.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322661720|gb|EFY57938.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669701|gb|EFY65847.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673292|gb|EFY69397.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322674919|gb|EFY71006.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682942|gb|EFY78960.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322685603|gb|EFY81598.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715627|gb|EFZ07198.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323191969|gb|EFZ77207.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323200398|gb|EFZ85479.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323201298|gb|EFZ86365.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208368|gb|EFZ93308.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211556|gb|EFZ96394.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215988|gb|EGA00720.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221768|gb|EGA06176.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225623|gb|EGA09850.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229341|gb|EGA13465.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323235344|gb|EGA19428.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323237470|gb|EGA21533.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323245225|gb|EGA29226.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248799|gb|EGA32726.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323254021|gb|EGA37842.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323259069|gb|EGA42717.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261991|gb|EGA45556.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267775|gb|EGA51256.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269666|gb|EGA53118.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326624394|gb|EGE30739.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628772|gb|EGE35115.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|116490247|ref|YP_809791.1| hexulose-6-phosphate isomerase [Oenococcus oeni PSU-1]
 gi|290889629|ref|ZP_06552719.1| hypothetical protein AWRIB429_0109 [Oenococcus oeni AWRIB429]
 gi|116090972|gb|ABJ56126.1| 3-hexulose-6-phosphate isomerase [Oenococcus oeni PSU-1]
 gi|290480827|gb|EFD89461.1| hypothetical protein AWRIB429_0109 [Oenococcus oeni AWRIB429]
          Length = 180

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVEKI + + R+ + G G+SG +    A  L   G   + +            I   D++
Sbjct: 25  AVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYVIGETITPS-----IAAGDVL 79

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           + +S SG++  +      A +  + ++A+TS ++S +A ++D+ L +P
Sbjct: 80  VSVSGSGTTGSVLEPTEKAHQNGVEIVAVTSNSQSPLAKNSDVALIVP 127


>gi|310764809|gb|ADP09759.1| putative DNA-binding transcriptional regulator [Erwinia sp. Ejp617]
          Length = 279

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+ G+G SG +    +  L   G  +       A    +  ++  D+++ +S++G   
Sbjct: 131 RIVLIGVGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERR 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      ARR    ++A T    + +   A+  L    E ++       +T+A  QLA+
Sbjct: 191 EINLAAQEARRIGATVLAFTGFTPNTLQQSANHCLYTVAEEQTTRSAAISSTTA--QLAL 248

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 249 TDLLFMALIQ 258


>gi|257052583|ref|YP_003130416.1| peptidase M50 [Halorhabdus utahensis DSM 12940]
 gi|256691346|gb|ACV11683.1| peptidase M50 [Halorhabdus utahensis DSM 12940]
          Length = 412

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 2/119 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V   DVM   D +  V     + + + ++  +R     VVD G+ L G++T  D      
Sbjct: 253 VSVRDVMTPADRVQTVDPDLSVAELMELMFRERHTGFPVVDSGRVL-GLVTLEDARAVRE 311

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      E+VM  + + I  D     A+  +++HNI  L+V++D  + +G++   DL+
Sbjct: 312 VEREAFRTEEVMTTDLRTIHPDENAMTALTRMQEHNIGRLIVMED-DEFVGLLTRSDLM 369


>gi|297159678|gb|ADI09390.1| IMP dehydrogenase/ GMP reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 500

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 49/111 (44%), Gaps = 14/111 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    L +A  +  + R   V V D   KL GI+T  D+   F  D     V +VM   
Sbjct: 108 VRPDATLAEADALCGKFRISGVPVTDAAGKLLGIVTNRDMA--FETDRRR-QVREVMTPM 164

Query: 293 PKVIL------EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P V        ED     AMQLLR+H I  L +VDD     G++   D ++
Sbjct: 165 PLVTGKVGISGED-----AMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|262172702|ref|ZP_06040380.1| transcriptional regulator RpiR family [Vibrio mimicus MB-451]
 gi|261893778|gb|EEY39764.1| transcriptional regulator RpiR family [Vibrio mimicus MB-451]
          Length = 282

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLA 87
           ++IA+K   +  ++      + +F    E I  I+   RV I G+G S   G  LA  L 
Sbjct: 96  AVIAQKLVQTKTDAMFHTSNALRFDEFSEAINWIQQAVRVQIIGLGGSALTGKDLAFKLL 155

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +     +         +   D++I +S+SG   E+      A++    +IA+T+ 
Sbjct: 156 KLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTP 215

Query: 148 NKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           NK+ +   AD+ L T+  E +     +A  T+   Q  + D + I L + R  S
Sbjct: 216 NKNRLRELADLALDTIADESQHRSSAIASRTA---QNVLTDLIFITLAQQRETS 266


>gi|329850815|ref|ZP_08265660.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis biprosthecum
           C19]
 gi|328841130|gb|EGF90701.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis biprosthecum
           C19]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 3/92 (3%)

Query: 245 ILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           I++ +R     VV+ E  +L GI+T  DI   F  D +  + E +  +N   + +    +
Sbjct: 110 IIARRRISGFPVVERETNRLVGILTNRDI--RFESDNSKTAAELMTTENLITVTDGVDQS 167

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A  L+ +H I  ++VVD+  +++G++   D+
Sbjct: 168 RARDLMARHRIERIIVVDEAYRSVGLITVKDM 199


>gi|310639558|ref|YP_003944316.1| inosine-5-monophosphate dehydrogenase [Paenibacillus polymyxa SC2]
 gi|309244508|gb|ADO54075.1| Inosine-5-monophosphate dehydrogenase [Paenibacillus polymyxa SC2]
          Length = 485

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 8/98 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++ + R   V VV+E  KL GIIT  D+    NF      L + +VM K   V   
Sbjct: 110 DAEAVMGKYRISGVPVVNEENKLVGIITNRDLRFIHNFD-----LKISEVMTKEELVTAP 164

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 165 VGTTLQEAEVILQKHKIEKLPLVDEGNYLKGLITIKDI 202


>gi|167629951|ref|YP_001680450.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
           modesticaldum Ice1]
 gi|167592691|gb|ABZ84439.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
           modesticaldum Ice1]
          Length = 891

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)

Query: 250 RFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           R+G   + V EG +L G+I+  D  + +   L    V+  M +N   I  DT L    +L
Sbjct: 336 RYGHTGLPVVEGDRLVGVISRRDFDKAYIHGLRHAPVKGFMSRNVITITPDTSLRHIQRL 395

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L +H+I  L V+++  K +GIV   D+LR
Sbjct: 396 LIEHDIGRLPVLEEG-KLVGIVSRTDVLR 423


>gi|78776969|ref|YP_393284.1| inositol-5-monophosphate dehydrogenase [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497509|gb|ABB44049.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 481

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++SE +   V V++   KL GI+T  D+   F KD+ T   ++VM K P +  +
Sbjct: 105 LADADALMSEFKISGVPVINAHNKLLGILTNRDM--RFQKDM-TKRADEVMTKMPLITAK 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  ++ ++ I  L ++DD     G+V   D+ +
Sbjct: 162 KGISLDDAADIMHKNKIEKLPIIDDDGFLKGLVTIKDIKK 201


>gi|294789452|ref|ZP_06754689.1| transcriptional regulator, RpiR family [Simonsiella muelleri ATCC
           29453]
 gi|294482665|gb|EFG30355.1| transcriptional regulator, RpiR family [Simonsiella muelleri ATCC
           29453]
          Length = 280

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 19/136 (13%)

Query: 66  RVVITGIGKSGHIGSKLA--------STLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           R+   G+G SG +             ST+A + T    + AA        +++  D+++V
Sbjct: 129 RIEFYGVGNSGIVAQDAQHKFFRFGISTVAYSDTHIQLMAAA--------VLSPQDVLVV 180

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SGSS E+   +  A+     +I IT  + S +A   D VLT+  + +S  +   P  
Sbjct: 181 ISNSGSSIEILDAVSIAKENGAQVIVITRHD-SPLAQLGDCVLTVAVQEDSSRY--TPMV 237

Query: 178 SAIMQLAIGDALAIAL 193
           S ++QLA+ D LAI L
Sbjct: 238 SRLLQLAVVDILAIGL 253


>gi|206901253|ref|YP_002251206.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
 gi|206740356|gb|ACI19414.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
          Length = 845

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 219 CASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            A D+M    S P+V I     + +A  I+ +  +G + V +E +KL GII+  DI R  
Sbjct: 312 LAKDIM----SYPVVTIPPDISIKEAFKIMMKYGYGGLCV-EENKKLVGIISRRDIERAI 366

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L    V+  M K    +  +T +    ++L + NI  + V+ D  K +GI+   D+L
Sbjct: 367 NLKLTKRKVKSFMSKPVITVTPETPIWEIEKILVEKNIGRVPVL-DGDKIVGIITRQDIL 425

Query: 337 RF 338
           RF
Sbjct: 426 RF 427


>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
           HF4000_APKG1C9]
          Length = 147

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS-VEDVMIKNPKVI 296
           L DA  ++ +   G + VVD+   L G+IT+ D+  R   + ++  + V DVM ++   +
Sbjct: 20  LQDAARLMIDNDCGQIPVVDDEGGLVGVITDRDVCCRAVAEGMSAETRVGDVMTRSVVSV 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             DT L   +  + ++ +  + V+DD  K  G+V   D+ R G
Sbjct: 80  TPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVARTG 122


>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 279

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 55/97 (56%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA  ++  K    + VV++G K+ GI+T+ D+ R + +       V D+M K+   + E+
Sbjct: 93  DAADLMLRKDISALPVVEDG-KILGIVTKTDLVRIYSEKFKGRYKVADLMSKDVVTVNEN 151

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T L+   +LL ++NIS  +VV   ++ IGI+   D+L
Sbjct: 152 TTLSHVAKLLDKNNIS-RVVVTAGKEPIGIITATDIL 187



 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 49/91 (53%), Gaps = 9/91 (9%)

Query: 256 VVDEGQKLKGIITEGDIFRNF--------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           V++E ++L GI++E DI             + ++ + V+ +M KNP  +  +  +  A  
Sbjct: 37  VINEDEELVGILSETDIASLLKIGGPAWKRRPIDNILVKRIMTKNPVTVSPNEDIKDAAD 96

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ + +IS L VV+D  K +GIV   DL+R 
Sbjct: 97  LMLRKDISALPVVEDG-KILGIVTKTDLVRI 126


>gi|117920024|ref|YP_869216.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
 gi|117612356|gb|ABK47810.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
          Length = 620

 Score = 38.9 bits (89), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILED 299
           A  ++   R   + V D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGRIAVHQAMTTSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++D+      KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDEQNTEEVKAIGMVTSTDILR 272


>gi|302388098|ref|YP_003823920.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
 gi|302198726|gb|ADL06297.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
          Length = 285

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           + RDDL I +S+SG ++E+   +  A+     +IAIT   +S +A  AD V  LP     
Sbjct: 177 LRRDDLAIAISYSGLTEEILQCVKEAKGNGAKVIAITRAVESELALEADFV--LPVAATE 234

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             H     +S I QL + D    A + +RN+
Sbjct: 235 LIHRSGAMSSRISQLNVIDIFFTAYV-NRNY 264


>gi|148379064|ref|YP_001253605.1| CBS domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153933178|ref|YP_001383447.1| CBS domain-containing protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153935635|ref|YP_001386994.1| CBS domain-containing protein [Clostridium botulinum A str. Hall]
 gi|153938115|ref|YP_001390432.1| CBS domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|148288548|emb|CAL82628.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929222|gb|ABS34722.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
 gi|152931549|gb|ABS37048.1| CBS domain protein [Clostridium botulinum A str. Hall]
 gi|152934011|gb|ABS39509.1| CBS domain protein [Clostridium botulinum F str. Langeland]
 gi|295318519|gb|ADF98896.1| CBS domain protein [Clostridium botulinum F str. 230613]
 gi|322805403|emb|CBZ02967.1| hypothetical protein H04402_01152 [Clostridium botulinum H04402
           065]
          Length = 126

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A+ +++E       V DE   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 22  ALNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 82  EDVISIAKKILDK-DIIAMPIVDSSKKLLGIVSVEDILK 119


>gi|23100159|ref|NP_693625.1| hypothetical protein OB2704 [Oceanobacillus iheyensis HTE831]
 gi|22778391|dbj|BAC14660.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 17/140 (12%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G G+SG +G      L  +G   + V        +   +  +DL+I++S SG + 
Sbjct: 36  RVFIAGTGRSGLVGKMFGMRLMHSGYQIYIV-----GETNTPSLESNDLLILISGSGGTS 90

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL--------TLPKEPESC-PHGLAPT 176
            L      A+     +  +T+  +S +   +  ++         LP+EPE+  P G    
Sbjct: 91  SLLNYAKKAKEIDAKVALVTTNKESAIGSQSTYIVRVPAATKKRLPQEPETIQPLGSQFD 150

Query: 177 TSAIMQLAIGDALAIALLES 196
            SA + L   DA+ + LL++
Sbjct: 151 QSAHLLL---DAIVVYLLDT 167


>gi|259907683|ref|YP_002648039.1| putative DNA-binding transcriptional regulator [Erwinia pyrifoliae
           Ep1/96]
 gi|224963305|emb|CAX54790.1| Putative transcriptional regulator [Erwinia pyrifoliae Ep1/96]
 gi|283477535|emb|CAY73451.1| Bifunctional protein glk [Erwinia pyrifoliae DSM 12163]
          Length = 279

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 59/130 (45%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+ G+G SG +    +  L   G  +       A    +  ++  D+++ +S++G   
Sbjct: 131 RIVLIGVGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERR 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      ARR    ++A T    + +   A+  L    E ++       +T+A  QLA+
Sbjct: 191 EINLAAQEARRIGATVLAFTGFTPNTLQQSANHCLYTVAEEQTTRSAAISSTTA--QLAL 248

Query: 186 GDALAIALLE 195
            D L +AL++
Sbjct: 249 TDLLFMALIQ 258


>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
 gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
          Length = 147

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNTLSVEDVMIKNPKVIL 297
           +A  I+S+K  G + VV+ GQ +KG+IT+ DI  R     KD  +  V ++M    +V+ 
Sbjct: 27  EAAQIMSQKNIGALPVVENGQ-VKGMITDRDITLRTSAQGKDPASTPVSEIMTN--RVVT 83

Query: 298 EDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               ++V  A  ++ QH I  L +V++ Q   GIV   D+
Sbjct: 84  GTPNMSVQEAASVMAQHQIRRLPIVENNQIQ-GIVALGDI 122


>gi|145295429|ref|YP_001138250.1| hypothetical protein cgR_1366 [Corynebacterium glutamicum R]
 gi|140845349|dbj|BAF54348.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 622

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 262 KLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +LKGIIT+ D+  R   KDL+  L V +VM  +P+      L   AM L+ +  I  L +
Sbjct: 196 ELKGIITDRDMRSRVVAKDLDIQLPVTEVMTVDPRCATSQGLAFEAMLLMSELRIHHLPI 255

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VDD Q + GIV   D++R 
Sbjct: 256 VDDGQIS-GIVTAADIMRL 273


>gi|15669112|ref|NP_247917.1| hypothetical protein MJ_0922 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496138|sp|Q58332|Y922_METJA RecName: Full=Uncharacterized protein MJ0922
 gi|1591595|gb|AAB98926.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 138

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 7/95 (7%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQ 307
           +   + V+D+  K+ GI+T  DI  N  +D  TL  ++ DVM K+   I ED  +  A++
Sbjct: 38  KISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIHEDASILEAIK 97

Query: 308 LL-----RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     ++  I+ L VVD   K +GI+   D++R
Sbjct: 98  KMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132


>gi|325970090|ref|YP_004246281.1| RpiR family transcriptional regulator [Spirochaeta sp. Buddy]
 gi|324025328|gb|ADY12087.1| transcriptional regulator, RpiR family [Spirochaeta sp. Buddy]
          Length = 284

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 58  EKIKAI--KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E ++AI     ++I+GIG SG +   L   LA  G  + F   ++    +   + + D++
Sbjct: 125 ESVEAILHASHLLISGIGASGVVAIDLQQKLARLGLKAVFTADSDMQIVEACALHKQDVL 184

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           I +S+SG ++ +  +   A++    +IAIT    + ++  ADI L +
Sbjct: 185 IAISYSGETNSVLKVAREAKKNESTVIAITRIGGNSLSKLADITLNV 231


>gi|307352325|ref|YP_003893376.1| 6-phospho-3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
 gi|307155558|gb|ADN34938.1| 6-phospho-3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
          Length = 204

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 7/121 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G G+SG I    A  L   G  S+ V        + G     D ++V S +G ++
Sbjct: 42  RIYVAGAGRSGLIARAFAMRLMHIGLESYVVGETVTPAMEPG-----DAVVVFSGTGETN 96

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +  I    +     L  ITS   S +   AD ++ +P EP        P T  + QL  
Sbjct: 97  SMVDIAESTKALGGTLCLITSHRGSSIGKLADYIVEIPSEPPEDRE--WPNTFEVRQLTG 154

Query: 186 G 186
           G
Sbjct: 155 G 155


>gi|260769995|ref|ZP_05878928.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|260615333|gb|EEX40519.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|315182519|gb|ADT89432.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
           furnissii NCTC 11218]
          Length = 623

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 4/76 (5%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTV 304
           E+R    AV+  G  + GI+T+ D+ R+      D+    ++ VM +NP++I  D  +  
Sbjct: 186 ERRRSSCAVITRGGDIVGIVTDRDMTRSVVASGIDIQQ-PIQRVMTQNPQLIQADDKVIQ 244

Query: 305 AMQLLRQHNISVLMVV 320
           A+ ++ Q+NI  L VV
Sbjct: 245 AISIMLQYNIRCLPVV 260


>gi|269836073|ref|YP_003318301.1| sugar isomerase (SIS) [Sphaerobacter thermophilus DSM 20745]
 gi|269785336|gb|ACZ37479.1| sugar isomerase (SIS) [Sphaerobacter thermophilus DSM 20745]
          Length = 218

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 32/53 (60%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           DL++V+S SG S+ L      ARR  + ++A+T E  S +A  AD+ + +P +
Sbjct: 133 DLLVVISTSGESENLVRAAVTARRRGLTVLAVTGERDSRLAALADLAVRVPTD 185


>gi|302342909|ref|YP_003807438.1| CBS domain containing protein [Desulfarculus baarsii DSM 2075]
 gi|301639522|gb|ADK84844.1| CBS domain containing protein [Desulfarculus baarsii DSM 2075]
          Length = 197

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 57/98 (58%), Gaps = 3/98 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIKNPKVILEDT 300
           A+ ++ E+    + V+++G +L G++T+ ++    F   L+ L+V DVM+K+P  I  D 
Sbjct: 23  ALKMMRERDVRHLPVLEQG-RLVGLVTDTELRTAWFPSLLDKLNVNDVMVKHPVTIGADE 81

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A +L+  + I+ L V+D   K +G++   D+L+ 
Sbjct: 82  TVYQAARLIHHNRITGLPVLDGG-KLVGMITQADILQL 118


>gi|299139248|ref|ZP_07032424.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX8]
 gi|298598928|gb|EFI55090.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX8]
          Length = 508

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           P+ DA+ ++   +   V V   G KL GI+T  D+      D+    + DVM K   + +
Sbjct: 106 PIADALEVMRRYKISGVPVTKNG-KLVGILTNRDLRFVSRTDI---PISDVMTKKNLITV 161

Query: 298 E-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A  +L +H +  L+VV+D  +  G++   D+ +
Sbjct: 162 PVGTTLEEAENILHEHRVEKLLVVNDAYELKGLITVKDIQK 202


>gi|295109331|emb|CBL23284.1| 3-hexulose-6-phosphate isomerase [Ruminococcus obeum A2-162]
          Length = 185

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/150 (21%), Positives = 64/150 (42%), Gaps = 12/150 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G G+SG +    A+ L   G   FFV            I   DL+++ S SG + 
Sbjct: 37  RIFVAGAGRSGFVARAFANRLMHMGLTVFFVGEPTTPA-----IKAGDLLVIGSGSGETG 91

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP-----ESCPHGLAPTTSAI 180
            L  +   A++    +I +T   ++ +   ++  + +P        E     + P  +A 
Sbjct: 92  SLVVMAQKAKKIGASVITVTIHPEASIGKLSEAWICIPGATPKSSLEDTVKSVQPMGNAF 151

Query: 181 MQLA--IGDALAIALLESRNFSENDFYVLH 208
            Q+   + DA+ + L++    +E + + LH
Sbjct: 152 EQMTWLVYDAVIMILMKKTGRTEEEMFKLH 181


>gi|213857536|ref|ZP_03384507.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|188584886|ref|YP_001916431.1| glutamine--fructose-6-phosphate transaminase [Natranaerobius
           thermophilus JW/NM-WN-LF]
 gi|179349573|gb|ACB83843.1| glutamine--fructose-6-phosphate transaminase [Natranaerobius
           thermophilus JW/NM-WN-LF]
          Length = 607

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 40/151 (26%), Positives = 76/151 (50%), Gaps = 9/151 (5%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIG-KSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           EL +  +  + ++ ++K  +V  G    +G +G  +  +LA+   P     A+E  + D 
Sbjct: 279 ELKYLNYDKISQLNSVK--IVACGTAYHAGLVGKTMIESLANI--PVEVDIASEFRYRD- 333

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            +I  DDL+IV+S SG + +  A L  +++    ++AIT+   S V+  AD V+     P
Sbjct: 334 PLIKNDDLVIVISQSGETADTLAALRESQKRGAKVLAITNVVGSSVSREADEVIYTWAGP 393

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           E     +A T + + QL +   L+I   +++
Sbjct: 394 EIA---VASTKAYVTQLVVFSLLSIYFAQAK 421


>gi|152997991|ref|YP_001342826.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150838915|gb|ABR72891.1| CBS domain containing protein [Marinomonas sp. MWYL1]
          Length = 133

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 12/92 (13%)

Query: 257 VDEGQKLKGIITEGDIFR----------NFHKDLNTLS--VEDVMIKNPKVILEDTLLTV 304
           V E  KL GII++ D+ R             +DL+TL+     VM + P  +  +T +  
Sbjct: 37  VTEKDKLVGIISDRDLLRLISPFIDSASEQPRDLDTLNRAAHQVMTRQPITVRAETPVEE 96

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  L++ +IS L V DD    IGI+ + DL+
Sbjct: 97  IVAWLKRVDISCLPVTDDEDHVIGIISWRDLV 128


>gi|28210130|ref|NP_781074.1| glycine/betaine transport ATP-binding protein [Clostridium tetani
           E88]
 gi|28202566|gb|AAO35011.1| glycine/betaine transport ATP-binding protein [Clostridium tetani
           E88]
          Length = 368

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 66/119 (55%), Gaps = 15/119 (12%)

Query: 217 FVCASDVMHSGDSIPLVKIG-CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            + A D+M      P+   G   ++ ++ I+ +     + VVD+   LKGI+T       
Sbjct: 247 LITAEDIMIKN---PIKTFGERTIVQSVNIMKQNHVDSILVVDKDNILKGIVTLK----- 298

Query: 276 FHKDLNTLS---VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            H DL+ ++   ++DVM  + K + LED+++ V ++++++++IS + VVD  +K  G++
Sbjct: 299 -HLDLDNVNGKKLKDVMASDLKYVELEDSIMDV-IKVMKENSISYIPVVDKDKKLKGLI 355



 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           DVM S   +  V++   ++D I ++ E     + VVD+ +KLKG+IT+  +   F K
Sbjct: 312 DVMAS--DLKYVELEDSIMDVIKVMKENSISYIPVVDKDKKLKGLITQSSLITTFSK 366


>gi|121996987|ref|YP_001001774.1| CBS domain-containing protein [Halorhodospira halophila SL1]
 gi|121588392|gb|ABM60972.1| CBS domain containing protein [Halorhodospira halophila SL1]
          Length = 145

 Score = 38.5 bits (88), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 13/96 (13%)

Query: 254 VAVVDEGQKLKGIITEGDIFRN------------FHKDLNTLSVEDVMIKNPKVILEDTL 301
           + VVDE   L G++T+ D+ R             ++ D N +++++VM ++P V+     
Sbjct: 35  LPVVDEDMALLGMVTDRDLRRPDWVDEAPDIAHVYYLDDN-MALKNVMTRHPVVVHTYDP 93

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  A QL+R++    L V++  Q+ +G+V  +D+L+
Sbjct: 94  VQRAAQLMRENRFGALPVLNKEQRLVGMVSAVDMLQ 129


>gi|315427058|dbj|BAJ48675.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 145

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 8/105 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-----FHKDLNTLSVEDVMIKNPKV 295
           +A   + +   G + V+D+   L GIITE DI          KDL   S+   M KN   
Sbjct: 34  EAAKTMWDNGVGSILVLDKDGTLVGIITERDILYAASHLLLGKDLKARSL---MSKNLVT 90

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D  +   ++ ++  NI  + VVD   K +G++   D+L FG+
Sbjct: 91  ASPDEDVASVLEKMKDFNIRHIPVVDQEGKPLGVLSSRDILDFGV 135


>gi|295402384|ref|ZP_06812338.1| 6-phospho 3-hexuloisomerase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975547|gb|EFG51171.1| 6-phospho 3-hexuloisomerase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 187

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G+SG +    A  +   G  ++ V      +     + +DD++I+ S SG + 
Sbjct: 40  KIFVAGAGRSGFMSKSFAMRMMHMGLDAYVVGETITPN-----LEQDDILIIGSGSGETR 94

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ESCPHG---LAPTTSAIM 181
            L ++   A+     +  +T    S +   ADI + LP  P +   +G   + P  S   
Sbjct: 95  SLVSMAEKAKSLGATIALVTIFPASTIGKLADITVKLPGSPKDQADNGYKTIQPMGSLFE 154

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ +  +E +    N  +  H
Sbjct: 155 QTLLLFYDAVILRCMEKKGLDSNTMFKRH 183


>gi|257898565|ref|ZP_05678218.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com15]
 gi|257836477|gb|EEV61551.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com15]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  + +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLILAEEYSDSSWNAANLTSEDCAVFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVGAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|312112067|ref|YP_003990383.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. Y4.1MC1]
 gi|311217168|gb|ADP75772.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. Y4.1MC1]
          Length = 187

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 63/149 (42%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G G+SG +    A  +   G  ++ V      +     + +DD++I+ S SG + 
Sbjct: 40  KIFVAGAGRSGFMSKSFAMRMMHMGLDAYVVGETITPN-----LEQDDILIIGSGSGETR 94

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ESCPHG---LAPTTSAIM 181
            L ++   A+     +  +T    S +   ADI + LP  P +   +G   + P  S   
Sbjct: 95  SLVSMAEKAKSLGATIALVTIFPASTIGKLADITVKLPGSPKDQADNGYKTIQPMGSLFE 154

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ +  +E +    N  +  H
Sbjct: 155 QTLLLFYDAVILRCMEKKGLDSNTMFKRH 183


>gi|147920346|ref|YP_685881.1| hypothetical protein RCIX1257 [uncultured methanogenic archaeon
           RC-I]
 gi|110621277|emb|CAJ36555.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 138

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 55/119 (46%), Gaps = 6/119 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HK 278
           DVM S   I  V       DA   +  +  G V VVD G  +KGI+T+  I        K
Sbjct: 5   DVMTS--EIACVDTKSTAADAAAKMKNQNTGTVIVVD-GDSVKGIVTDRQIAIKAVAEKK 61

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D     V D+M K+     E+  +  A++ + ++ +  L VV+D  + +GIV   D+ R
Sbjct: 62  DPKNTPVSDIMTKDIVGCRENDDIFDALKTMGENKVRRLPVVNDNSQLVGIVSISDIAR 120


>gi|14325574|dbj|BAB60477.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 174

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 239 LIDAITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           + DA+ I++E R +G +   +EG+ + G+I+E  I + F   +K  + + ++ VM K   
Sbjct: 18  VFDAVKIMNENRLYGLIVKDNEGKDV-GLISERSIIKRFIPRNKKPDEVQIKYVMRKPIP 76

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     +  A   L ++ +    VVD   K +GI+   DL R+
Sbjct: 77  KVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTDLSRY 120


>gi|330837049|ref|YP_004411690.1| CBS domain containing membrane protein [Spirochaeta coccoides DSM
           17374]
 gi|329748952|gb|AEC02308.1| CBS domain containing membrane protein [Spirochaeta coccoides DSM
           17374]
          Length = 214

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 60/112 (53%), Gaps = 13/112 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------VE 286
           +I+A  ++ +++   + V+D+ +KL GIITE DI       +++LS            V+
Sbjct: 20  VIEASGLMKKEKVHRLPVLDKNKKLVGIITEKDILYASPSPVSSLSIHEMAYLLSEMKVK 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +M +N   I +DT +  A +L+   ++S L VV++  + +GI+   DL + 
Sbjct: 80  KLMSRNVVTISKDTTVEEAARLMVDQDLSSLPVVEN-DRLVGIISKSDLFKI 130


>gi|323485544|ref|ZP_08090890.1| glycine betaine/L-proline transport [Clostridium symbiosum
           WAL-14163]
 gi|323401192|gb|EGA93544.1| glycine betaine/L-proline transport [Clostridium symbiosum
           WAL-14163]
          Length = 386

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 7/74 (9%)

Query: 270 GDIFRNF------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            D  RNF        +   + V+D+M K P  I  +  +  AMQ++RQ+NI  L+V  + 
Sbjct: 230 NDYIRNFIGENRLWHNPEFIRVKDIMRKRPFTISRERTILQAMQIMRQNNIDSLLVTGEK 289

Query: 324 QKAIGIVHFLDLLR 337
            + +G++ ++D L+
Sbjct: 290 NRFLGMI-WMDSLK 302


>gi|293570446|ref|ZP_06681501.1| transcriptional regulator [Enterococcus faecium E980]
 gi|291609392|gb|EFF38659.1| transcriptional regulator [Enterococcus faecium E980]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 59/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +T +D  + +S+SG 
Sbjct: 135 RIFLFAKGDSQITARKFQNKMVKLN--KFLILAEEYSDSSWNAANLTSEDCAVFISYSGR 192

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 193 IHHYERIMTYLKHVGAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 248

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 249 AFDYVLNTLFSVIYSQNFEEN 269


>gi|271501610|ref|YP_003334636.1| glucokinase regulatory-like protein [Dickeya dadantii Ech586]
 gi|270345165|gb|ACZ77930.1| glucokinase regulatory-like protein [Dickeya dadantii Ech586]
          Length = 312

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 22/127 (17%)

Query: 63  IKGRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM- 108
           + GR++  G G SG +G   AS    T             G P   + A E +  D  + 
Sbjct: 68  VGGRIIYQGAGTSGRLGVLDASECPPTFGVPHGVVVGLIAGGPGALLKAVEGAEDDPALG 127

Query: 109 --------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                   +T  D++I ++ SG +  +   L YAR      +AI+    S +A  A+I +
Sbjct: 128 EADLVALTLTSRDIVIGIAASGRTPYVIGGLRYARTLGCRTVAISCNPHSPIAQEAEIAI 187

Query: 161 TLPKEPE 167
           +    PE
Sbjct: 188 SPLVGPE 194


>gi|218897233|ref|YP_002445644.1| transcriptional regulator, RpiR family [Bacillus cereus G9842]
 gi|228900855|ref|ZP_04065070.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           4222]
 gi|228908029|ref|ZP_04071878.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           200]
 gi|228965236|ref|ZP_04126330.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218541642|gb|ACK94036.1| transcriptional regulator, RpiR family [Bacillus cereus G9842]
 gi|228794470|gb|EEM41982.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228851626|gb|EEM96431.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           200]
 gi|228858781|gb|EEN03226.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           4222]
          Length = 284

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|295399549|ref|ZP_06809531.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109896|ref|YP_003988212.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294979015|gb|EFG54611.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214997|gb|ADP73601.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 214

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 19/109 (17%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------FRNFHKDLNTLSVED 287
           +AI ++ ++R   + +VD    + GI+T+ DI               +  K ++T+   D
Sbjct: 22  EAIQLVRQRRIRHIPIVDGDDHVVGIVTDRDIRDASPSIFHFHEHLEDLQKPISTIMKTD 81

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++ +P   +E+        L  +H IS L +V D +K +GIV   DLL
Sbjct: 82  VIVGHPLDFVEE-----VAALFYEHKISCLPIVKD-RKLVGIVTETDLL 124


>gi|168466667|ref|ZP_02700521.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195630772|gb|EDX49364.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
 gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 142

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           PLIDA+ I++    G + V+DEG KL GI++E D  R     +K    + V D+M     
Sbjct: 23  PLIDALKIMAVHDVGAMVVIDEG-KLVGILSERDYARKVALANKSSTDICVGDIMTSRVT 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + ++  +   M L+   N   L V +     IG++   DL++
Sbjct: 82  TVSKEHTVEECMTLMSDGNFRHLPVTEK-GFVIGVISIGDLVK 123


>gi|157961522|ref|YP_001501556.1| CBS domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157846522|gb|ABV87021.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella pealeana ATCC 700345]
          Length = 615

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVM 289
           + +   +  A  ++   R   V V+D   KL GI+T+ D+ RN     N   +L V   M
Sbjct: 163 IDMKASVAQASRLMRTSRVSSVLVIDNN-KLVGILTDRDL-RNRVLAENHDGSLPVHQAM 220

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P  I  ++L+  AM L+ +HNI  L VVD+     G+V   D+LR
Sbjct: 221 TTTPVSIESNSLVFEAMLLMSEHNIHHLPVVDNG-VTTGVVTSTDILR 267


>gi|18978325|ref|NP_579682.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Pyrococcus furiosus DSM 3638]
 gi|18894155|gb|AAL82077.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Pyrococcus furiosus DSM 3638]
          Length = 179

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           ILS  + G  AVV EG ++ G++TE DI        K+   + VE++M KNP  I  D  
Sbjct: 30  ILSRNKAGS-AVVMEGDEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKIEYDYD 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++L+ +  +  ++V     K IG V   D+L
Sbjct: 89  IEDVIELMTEKGVRRVLVT-KFGKPIGFVTAADIL 122


>gi|75761108|ref|ZP_00741103.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74491400|gb|EAO54621.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 263

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 13/158 (8%)

Query: 43  SSLQGELSFQFHCAVEK-IKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           + LQ  L      A+E+ ++A++   R+   G G SG I          TG       A 
Sbjct: 88  TGLQDTLHLLNETALEQAVRALQEASRIEFYGNGGSGIIAMDAYHKFMRTGISCI---AH 144

Query: 100 EASHGDL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             SH  +   G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A
Sbjct: 145 TDSHFQIMGAGLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLA 204

Query: 157 DIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           DI L T  +E E        ++S + QL++ D L + L
Sbjct: 205 DITLYTSTRETEFRTEA---SSSRLAQLSLLDTLYVGL 239


>gi|313885262|ref|ZP_07819014.1| choline ABC transporter, ATP-binding protein OpuBA [Eremococcus
           coleocola ACS-139-V-Col8]
 gi|312619953|gb|EFR31390.1| choline ABC transporter, ATP-binding protein OpuBA [Eremococcus
           coleocola ACS-139-V-Col8]
          Length = 402

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  L  A+ ++ E R   + V D+   LKG +   +I  NF     + S+ D+M +    
Sbjct: 264 GKSLRQALAMMHENRVDTLLVTDDEGYLKGFVNIQEIQANFRD--KSKSISDIMQREVFF 321

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             E+TL+  ++  + +  +S + VVD  +K +GIV
Sbjct: 322 TRENTLVRDSISRILKRGLSYIPVVDQDKKLVGIV 356


>gi|304404999|ref|ZP_07386659.1| transcriptional regulator, RpiR family [Paenibacillus
           curdlanolyticus YK9]
 gi|304345878|gb|EFM11712.1| transcriptional regulator, RpiR family [Paenibacillus
           curdlanolyticus YK9]
          Length = 281

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 92/216 (42%), Gaps = 31/216 (14%)

Query: 3   FYFSHFKSVTRKGHSLMK-------NSTVQCALRSI--------IAEK---RGLSSLESS 44
           F FS  K +  KG+  MK        S VQ     I        +AEK     + +LE++
Sbjct: 54  FRFS--KRIGYKGYQAMKIALATEVRSPVQQIYEQISEQDNEKTVAEKVFKSNIQTLENT 111

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
            Q         AVE++   + RV   G G S  I          +G  SF   A   SH 
Sbjct: 112 YQILDGNAIKRAVERLVRAQ-RVHFYGTGGSAVIAMDAFHKFIRSGKQSF---AFLDSHF 167

Query: 105 DL---GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL- 160
            L     +T+DD+ +V+S SG++ +   IL  A       I IT   KS ++   D+ L 
Sbjct: 168 QLMSAAQLTKDDVAVVISHSGTNKDTIRILETAIENGAMTIGITGFPKSPISQKVDVALY 227

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           T  +E E     LA   S I QL++ DAL + ++ S
Sbjct: 228 TSSEETEYRSEALA---SRIGQLSLIDALYVNVMMS 260


>gi|295395136|ref|ZP_06805344.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971898|gb|EFG47765.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 508

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 88/208 (42%), Gaps = 18/208 (8%)

Query: 146 SENK-SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +EN  S+     D VL LP + +  P   +  T    +L I   L  A +++   S    
Sbjct: 11  AENPFSLTGLTYDDVLLLPGDTDVIPSEASTRTRLTRELDINIPLISAAMDTVTESRMAI 70

Query: 205 YVLHPGGKLGTLF--VCASDVMHSGDSIPLVKIGCPLIDAITILSEK------------R 250
            +   GG +G +   +   D     D +   + G  + D +TI ++K            R
Sbjct: 71  AMARIGG-IGIIHRNLSKEDQAAQVDYVKRSESGM-ITDPVTITADKTLQELDEMCGQYR 128

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLL 309
              + VVD+   L GIIT  D+      +  T +V +VM K+P +     + +  A +LL
Sbjct: 129 ISGLPVVDDNDVLVGIITNRDLRFVPRAEFTTTTVGEVMTKSPLITAPVGVSSEEAFELL 188

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +H I  L +VDD     G++   D ++
Sbjct: 189 AEHKIEKLPLVDDNNVIRGLITVKDFVK 216


>gi|294495070|ref|YP_003541563.1| homoserine O-acetyltransferase [Methanohalophilus mahii DSM 5219]
 gi|292666069|gb|ADE35918.1| homoserine O-acetyltransferase [Methanohalophilus mahii DSM 5219]
          Length = 483

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 58/118 (49%), Gaps = 6/118 (5%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           LG L V   DVM   + +  +  GC L +A  ++  K    + ++    ++ GI+T  DI
Sbjct: 358 LGHLTV--GDVM--SEDVSTLHEGCTLEEAAQLMILKNATHIPILATSGRITGIVTSWDI 413

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     ++  S+E+++ ++      D  L+ A  ++  H IS L VVDD    +GI+
Sbjct: 414 TRAVANKIS--SIENILSRDILTSRPDESLSSAALVMEDHAISALPVVDDRGCLVGIL 469


>gi|291520139|emb|CBK75360.1| Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) [Butyrivibrio fibrisolvens
           16/4]
          Length = 346

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           ++ A+    E     V +VDEG KL   ++EGD+ R F     DLN  SV  +   +P+ 
Sbjct: 12  ILQAMKTFDESARRTVFIVDEGMKLIAALSEGDV-RRFILSGGDLNE-SVSKIANYHPRT 69

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ED     A + L +HNI  + +VDD
Sbjct: 70  MKEDD-RDGAKEFLSRHNIEGVPIVDD 95


>gi|257899777|ref|ZP_05679430.1| sugar isomerase [Enterococcus faecium Com15]
 gi|257837689|gb|EEV62763.1| sugar isomerase [Enterococcus faecium Com15]
          Length = 334

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 32/166 (19%)

Query: 58  EKIKAIKGRVV-------------------ITGIGKSGHIGSKLASTLASTGT---PSFF 95
           E+IKAIKG +                    +  +G  G   S + +     G    P F 
Sbjct: 8   EQIKAIKGALALRPQVEKIIDKLYTEKFDAVYYLGIGGTYASSMQAVTYMNGKSNLPVFV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
            HAAE        +T+D +++V S +G++ E+   +   ++    LI    + +S ++  
Sbjct: 68  QHAAEYYTTGNKRLTKDSIVVVSSVTGTTQEVVKAVEEIKKVGATLIGFIDKAESKLSQL 127

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            D V+T P          AP T  I    + D L     E  ++SE
Sbjct: 128 CDFVVTYP----------APGTEQIKFFMVADRLMYLHGEFEDYSE 163


>gi|256810045|ref|YP_003127414.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
 gi|256793245|gb|ACV23914.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
          Length = 141

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 50/95 (52%), Gaps = 7/95 (7%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQ 307
           +   + V+DE  K+ GI+T  DI  N  +D  TL  ++ DVM K+   I ED  +  A++
Sbjct: 38  KISSLPVIDEENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITIDEDANILEAIK 97

Query: 308 LL-----RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     +   I+ L VVD   K +GIV   D++R
Sbjct: 98  KMDINGKKDEIINQLPVVDKDNKLVGIVSDGDIIR 132


>gi|212638338|ref|YP_002314858.1| putative transcriptional regulator [Anoxybacillus flavithermus WK1]
 gi|212559818|gb|ACJ32873.1| Predicted transcriptional regulator containing CBS domains
           [Anoxybacillus flavithermus WK1]
          Length = 436

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+D+  K++GI+T  D+   + +D+    +E VM K+P  +   T +  A  ++    I 
Sbjct: 228 VIDQQLKVQGIVTAKDVM-GYERDV---LIEKVMTKHPITVSGKTSVASASHMMVWEGIE 283

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           VL VVD+  +  GI+   D+L+
Sbjct: 284 VLPVVDEYDRLQGIISRQDVLK 305


>gi|187922843|ref|YP_001894485.1| hypothetical protein Bphyt_0839 [Burkholderia phytofirmans PsJN]
 gi|187714037|gb|ACD15261.1| CBS domain containing membrane protein [Burkholderia phytofirmans
           PsJN]
          Length = 388

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 20/64 (31%), Positives = 33/64 (51%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +  N L+  D+M ++   +   T  + A  LL+Q +I  L V D+ Q  IGIV  
Sbjct: 230 LQAYARTFNELTCADIMSRSLVAVSATTRASAAWSLLKQRHIKALPVTDEKQHVIGIVTR 289

Query: 333 LDLL 336
            DL+
Sbjct: 290 ADLV 293


>gi|42523182|ref|NP_968562.1| mannose-1-phosphate guanyltransferase [Bdellovibrio bacteriovorus
           HD100]
 gi|39575387|emb|CAE79555.1| Mannose-1-phosphate guanyltransferase [Bdellovibrio bacteriovorus
           HD100]
          Length = 350

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 3/82 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+ +L         V+D+ +KL G +T+GDI R   K  DL+ L V+ VM KNPK I E 
Sbjct: 18  AMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQL-VKGVMNKNPKSISEG 76

Query: 300 TLLTVAMQLLRQHNISVLMVVD 321
                 +  +RQ  +  L V++
Sbjct: 77  LSRNEIVAKMRQWRVRHLPVLN 98


>gi|227552419|ref|ZP_03982468.1| phosphosugar isomerase [Enterococcus faecium TX1330]
 gi|257888341|ref|ZP_05667994.1| sugar isomerase [Enterococcus faecium 1,141,733]
 gi|257896769|ref|ZP_05676422.1| sugar isomerase [Enterococcus faecium Com12]
 gi|293378051|ref|ZP_06624227.1| SIS domain protein [Enterococcus faecium PC4.1]
 gi|227178431|gb|EEI59403.1| phosphosugar isomerase [Enterococcus faecium TX1330]
 gi|257824395|gb|EEV51327.1| sugar isomerase [Enterococcus faecium 1,141,733]
 gi|257833334|gb|EEV59755.1| sugar isomerase [Enterococcus faecium Com12]
 gi|292643306|gb|EFF61440.1| SIS domain protein [Enterococcus faecium PC4.1]
          Length = 334

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 32/166 (19%)

Query: 58  EKIKAIKGRVV-------------------ITGIGKSGHIGSKLASTLASTGT---PSFF 95
           E+IKAIKG +                    +  +G  G   S + +     G    P F 
Sbjct: 8   EQIKAIKGALALRPQVEKIIDKLYTKKFDAVYYLGIGGTYASSMQAVTYMNGKSNLPVFV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
            HAAE        +T+D +++V S +G++ E+   +   ++    LI    + +S ++  
Sbjct: 68  QHAAEYYTTGNKRLTKDSIVVVSSVTGTTQEVVKAVEEIKKVGATLIGFIDKAESKLSQL 127

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            D V+T P          AP T  I    + D L     E  ++SE
Sbjct: 128 CDFVVTYP----------APGTEQIKFFMVADRLMYLHGEFEDYSE 163


>gi|170290691|ref|YP_001737507.1| inosine-5'-monophosphate dehydrogenase [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174771|gb|ACB07824.1| inosine-5'-monophosphate dehydrogenase [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 476

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/77 (29%), Positives = 44/77 (57%), Gaps = 3/77 (3%)

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           G+KL GI+T  D++  F ++  +L V+D+M K+P  +  +     A +++ ++ I  L V
Sbjct: 126 GRKLVGIVTRRDVY--FAEN-GSLLVKDIMTKDPITVGPEITPQEARKIMARYKIEKLPV 182

Query: 320 VDDCQKAIGIVHFLDLL 336
           V +  + IG+V   D+ 
Sbjct: 183 VSESGELIGLVTAKDVF 199


>gi|118586501|ref|ZP_01543945.1| hexulose-6-phosphate isomerase [Oenococcus oeni ATCC BAA-1163]
 gi|118433065|gb|EAV39787.1| hexulose-6-phosphate isomerase [Oenococcus oeni ATCC BAA-1163]
          Length = 180

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           AVEKI + + R+ + G G+SG +    A  L   G   + +            I   D++
Sbjct: 25  AVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYVIGETITPS-----IAAGDVL 79

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           + +S SG++  +      A +  + ++A+TS ++S +A ++D+ L +P
Sbjct: 80  VSVSGSGTTGSVLEPTEKAHQNGVEVVAVTSNSQSPLAKNSDVALIVP 127


>gi|84489206|ref|YP_447438.1| transcriptional regulator [Methanosphaera stadtmanae DSM 3091]
 gi|84372525|gb|ABC56795.1| predicted transcriptional regulator [Methanosphaera stadtmanae DSM
           3091]
          Length = 295

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D   ILSE       +VD+   + G+I   DI      +    + E+ M ++     +
Sbjct: 190 LTDICKILSENNQIGAPIVDDDNNILGVIRYSDIIDAVAANKMDSTAEEFMRESVVTARD 249

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  L+  M LL Q++++ L+++D   +  GIV F D+L+
Sbjct: 250 NISLSNGMTLLLQNDVTALILLDKNNEIYGIVSFNDMLK 288


>gi|72495442|dbj|BAE18763.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 183

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V ++G G+SG + +  A  L   G  +  V  +         IT  DL ++LS SGS++
Sbjct: 39  QVFVSGKGRSGFVANSFAMRLNQLGKGAHVVGESTTPS-----ITEKDLFVILSGSGSTE 93

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            L+ +   A+     ++ +++   S +   A+ V+ LP   +    G A    ++ + A 
Sbjct: 94  HLRLLADKAKAVGAEVVLLSTNPTSKIGELANAVIELPAGTKYDTEGSAQPLGSLFEQAS 153

Query: 186 G---DALAIALLESRNFSENDFYVLH 208
               D++ + L+   N  E      H
Sbjct: 154 QVFLDSIVLDLMTEINVDEETMQQNH 179


>gi|60459962|gb|AAX20152.1| AMPK-gamma subunit [Aedes aegypti]
          Length = 594

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 17/129 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLS 284
           S D+I +      +I A+    ++R   + +VD  ++LK I  + D+      K  N L 
Sbjct: 338 SYDNIEIATEDTSIITALHKFVDRRVSALPIVDSERRLKDIYAKFDVINLAAEKTYNDL- 396

Query: 285 VEDVMIKNPK------------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             DV +K                 L++TL TV  +++R   +  L+VVD+ +K IGI+  
Sbjct: 397 --DVSLKTANEHRNAWFEGVQHCKLDETLYTVMERIVRA-EVHRLVVVDEEEKVIGIISL 453

Query: 333 LDLLRFGII 341
            D+L + ++
Sbjct: 454 SDILLYLVL 462


>gi|292489083|ref|YP_003531970.1| bifunctional protein glk [Erwinia amylovora CFBP1430]
 gi|292900208|ref|YP_003539577.1| RpiR family transcriptional regulator [Erwinia amylovora ATCC
           49946]
 gi|291200056|emb|CBJ47181.1| RpiR-family transcriptional regulator [Erwinia amylovora ATCC
           49946]
 gi|291554517|emb|CBA22080.1| Bifunctional protein glk [Erwinia amylovora CFBP1430]
 gi|312173239|emb|CBX81494.1| Bifunctional protein glk [Erwinia amylovora ATCC BAA-2158]
          Length = 279

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 61/131 (46%), Gaps = 4/131 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+ GIG SG +    +  L   G  +       A    +  ++  D+++ +S++G   
Sbjct: 131 RIVLIGIGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERR 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      ARR    ++A T    + +   A+  L T+ +E  +    L+ TT+   QL 
Sbjct: 191 EINLAAQEARRIGATVLAFTGFTPNTLQQSANHCLYTVAEEQSTRSAALSSTTA---QLT 247

Query: 185 IGDALAIALLE 195
           + D L +AL++
Sbjct: 248 LTDLLFMALIQ 258


>gi|295689969|ref|YP_003593662.1| inosine-5'-monophosphate dehydrogenase [Caulobacter segnis ATCC
           21756]
 gi|295431872|gb|ADG11044.1| inosine-5'-monophosphate dehydrogenase [Caulobacter segnis ATCC
           21756]
          Length = 487

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 3/92 (3%)

Query: 245 ILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           I + ++     VV+ G  KL GI+T  D+   F  D    +   +  +N   + E     
Sbjct: 110 IKARRKISGFPVVERGSGKLVGILTNRDM--RFEGDDKVPASALMTRENLITVGEGIDHR 167

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A +LLR+H I  L+VVDD  +A+G++   D+
Sbjct: 168 EARELLRKHKIERLIVVDDAYRAVGLITVKDI 199


>gi|225850049|ref|YP_002730283.1| response regulator PleD [Persephonella marina EX-H1]
 gi|225644981|gb|ACO03167.1| response regulator PleD [Persephonella marina EX-H1]
          Length = 300

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIKNPKV 295
           C   + + I+  K+ G V VVD  ++LK I+T+ D+  +  H +L       +  K    
Sbjct: 20  CSFKEIVDIMKTKKIGSVLVVDADRRLKDIVTQSDLIMHLLHGNLEAKVKNFIRDKKLIT 79

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I E++ +  A+    ++ I  L V+D   + +GI+   D+L+
Sbjct: 80  IDENSHVFDAVSYFEKYRIKHLPVLDGDSRLVGIITATDILK 121


>gi|229816285|ref|ZP_04446594.1| hypothetical protein COLINT_03337 [Collinsella intestinalis DSM
           13280]
 gi|229808136|gb|EEP43929.1| hypothetical protein COLINT_03337 [Collinsella intestinalis DSM
           13280]
          Length = 268

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 62/141 (43%), Gaps = 10/141 (7%)

Query: 63  IKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR---DDLIIVL 118
           ++ RVV + G+G S  +   L   L          H  E  HG L  +     DDL IV 
Sbjct: 112 MRCRVVNLYGVGASLLVARDLEQKLTRVDKE---CHMREDWHGQLLSVRNIHPDDLAIVF 168

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S+SG + E+  +   AR     ++A+T      +A  AD+VL +         G     S
Sbjct: 169 SYSGLTHEMVTLARKARERGAKVVAVTRAMGGQLADEADLVLGVASSEPLVRSG--AMGS 226

Query: 179 AIMQLAIGDALAIALLESRNF 199
            + QL + DAL  AL  +R++
Sbjct: 227 RLSQLLVVDAL-FALYVTRDY 246


>gi|229916944|ref|YP_002885590.1| RpiR family transcriptional regulator [Exiguobacterium sp. AT1b]
 gi|229468373|gb|ACQ70145.1| transcriptional regulator, RpiR family [Exiguobacterium sp. AT1b]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 4/90 (4%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPE 167
           +T  D+ +V+S SG+S E   I    +   +P+IAIT+  KS ++  AD+ L T+ +E  
Sbjct: 176 LTTADVAVVISHSGASKETLDIAKLLKEKGVPMIAITNYAKSPLSKIADVSLYTVSQETA 235

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESR 197
                LA   S I +L++ DAL  A++  R
Sbjct: 236 FRSEALA---SRIAELSLIDALFTAVMMRR 262


>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
 gi|296159855|ref|ZP_06842676.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
 gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
           xenovorans LB400]
 gi|295889838|gb|EFG69635.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
          Length = 147

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVIL 297
           DAI +++EK  G + V D G  + GI+TE D  R      +      V D+M K  + + 
Sbjct: 28  DAIKLMAEKGIGALVVTD-GDSIAGIVTERDYARKVVLLDRSSKATPVRDIMSKAVRFVR 86

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D      M L+ +  +  L V+++  + +G+V   DL++
Sbjct: 87  PDQTTDDCMALMTERRMRHLPVIEN-DRLVGMVSIGDLVK 125


>gi|238794190|ref|ZP_04637805.1| Transcriptional regulator [Yersinia intermedia ATCC 29909]
 gi|238726480|gb|EEQ18019.1| Transcriptional regulator [Yersinia intermedia ATCC 29909]
          Length = 274

 Score = 38.5 bits (88), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 7/104 (6%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFF---VHAAEASHGDLGMITRDDLIIVLSWSGS 123
           V I G+  S  IG  L   L   G P+     +H A  +   LG+   +D++I +S SGS
Sbjct: 127 VQIYGVAASAIIGDFLQYKLLRVGKPALLFSDMHRAAMNASSLGL---NDMLIAISSSGS 183

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           + ++   +  A++    +I I++  +S +A  AD +L   K PE
Sbjct: 184 TKDILHAVTLAKQRQARVIVISNTQRSPLAKLADTLLVAAK-PE 226


>gi|330992523|ref|ZP_08316471.1| Putative HTH-type transcriptional regulator [Gluconacetobacter sp.
           SXCC-1]
 gi|329760722|gb|EGG77218.1| Putative HTH-type transcriptional regulator [Gluconacetobacter sp.
           SXCC-1]
          Length = 297

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R ++SL+  L    + Q   AV+ ++     + + G  +S  +   L  TLA  G  +  
Sbjct: 127 RDIASLQELLDNITAEQIARAVDLMERADT-IYLLGQLRSAPVAELLRYTLAMLGRRAVL 185

Query: 96  VHAAEASHGDLGMITR-DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           + AA      +  + R DDL++ +S+   ++E+  I+  A    IP++AIT    S +A 
Sbjct: 186 LDAAGGLATHMARVMRPDDLLLAVSFRFYANEVVNIVEDAASRDIPVVAITDSTLSPLAK 245

Query: 155 HADIVLTLPKEPESCPHGLA 174
           +A +   +P+   +    LA
Sbjct: 246 NARVTFAVPEHEYTFSRSLA 265


>gi|325577769|ref|ZP_08148044.1| RpiR family transcriptional regulator [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160514|gb|EGC72640.1| RpiR family transcriptional regulator [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 288

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 51/113 (45%), Gaps = 8/113 (7%)

Query: 53  FHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLG 107
           F    E +KAI+   RV + G+G SG       + L   G     V A   +H       
Sbjct: 123 FKQLEETVKAIQQANRVFLFGVGTSGITAEDAKNKLMRIGVQ---VDATGNNHFMYMQAS 179

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           ++T+ D+ I LS SG S E    +  A+      IAIT   +S +  +AD+VL
Sbjct: 180 LLTKKDVAIGLSHSGYSQETTHTMKIAKENGAKTIAITHSLRSPITEYADLVL 232


>gi|315641257|ref|ZP_07896334.1| CBS domain protein [Enterococcus italicus DSM 15952]
 gi|315483024|gb|EFU73543.1| CBS domain protein [Enterococcus italicus DSM 15952]
          Length = 215

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 14/113 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTL 283
             P+ DAI ++       + VV+EG  L G+ITEG I                +  +N  
Sbjct: 17  ATPVFDAIDVMKAHNIHRLPVVEEGH-LVGLITEGVIQSALPSKATSLSVYELNYLINKT 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D+MIK+   I    LL  A+  +R ++++VL V+D+    +GI+   D+ 
Sbjct: 76  NVSDIMIKDVLTIQPTALLEDAIAKMRTNSVAVLPVLDNGN-LVGIITNNDIF 127


>gi|162319807|ref|YP_301708.2| hypothetical protein SSP1618 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 182

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 8/146 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V ++G G+SG + +  A  L   G  +  V  +         IT  DL ++LS SGS++
Sbjct: 38  QVFVSGKGRSGFVANSFAMRLNQLGKGAHVVGESTTPS-----ITEKDLFVILSGSGSTE 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            L+ +   A+     ++ +++   S +   A+ V+ LP   +    G A    ++ + A 
Sbjct: 93  HLRLLADKAKAVGAEVVLLSTNPTSKIGELANAVIELPAGTKYDTEGSAQPLGSLFEQAS 152

Query: 186 G---DALAIALLESRNFSENDFYVLH 208
               D++ + L+   N  E      H
Sbjct: 153 QVFLDSIVLDLMTEINVDEETMQQNH 178


>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 147

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 3/100 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           +A  +L+  R G V  V     + GI++E DI R   +      +  V D+M  N +   
Sbjct: 27  EAARLLASHRIGAVIAVTANNAIAGILSERDIVRGLAQSDAACTSAKVADLMTANVQTCH 86

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ED  + + M+ +    I  L VVD   +  G+V   D+++
Sbjct: 87  EDDSVALLMKTMTDRRIRHLPVVDGGGRLTGMVTIGDVVK 126


>gi|228920977|ref|ZP_04084314.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838671|gb|EEM83975.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 284

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|291296715|ref|YP_003508113.1| CBS domain-containing protein [Meiothermus ruber DSM 1279]
 gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
          Length = 145

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 14/109 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTLSVEDV 288
           +A  I+ +  F  + VV+EG +L GI+T+ D+      D            ++ LSV ++
Sbjct: 22  EAAQIMKKGGFRRLPVVEEG-RLVGIVTDRDLKEAMPSDATSLSIWEINYLISRLSVGEI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M ++P  + +   L  A +L+ ++ +  L VV +  K +GIV   D+LR
Sbjct: 81  MTRDPISVADTLPLQAAAKLMLEYKVGGLPVVHEG-KLVGIVTVTDVLR 128


>gi|323487799|ref|ZP_08093057.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
 gi|323398533|gb|EGA91321.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
          Length = 283

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCP 170
           DD+ IV+S SGS+ ++  +L   +   + +I++T+  KS ++  ADI L T+ +E +   
Sbjct: 180 DDVAIVISHSGSTTDVLDVLRVLKEKGVTIISVTNFAKSPLSKEADIALYTVSEETDFRS 239

Query: 171 HGLAPTTSAIMQLAIGDALAIALL 194
             L   +S I QL++ DAL   L+
Sbjct: 240 EAL---SSRIAQLSLIDALYTNLM 260


>gi|225174496|ref|ZP_03728495.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
 gi|225170281|gb|EEG79076.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
          Length = 645

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKN 292
           G  + D    ++ +    + V D+ +K  GIITE D+ +        + +L  ED+M +N
Sbjct: 186 GNEITDLARTMTSRNVSSIIVTDQDEKPIGIITEKDLVKKVVAAGCFVKSLKAEDIMSEN 245

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  D     A+  + +H+I  L VV    KAIG++   D++
Sbjct: 246 LLTVKSDAFYYEALLTMVEHSIKHL-VVTAKDKAIGMITIRDMI 288


>gi|222444845|ref|ZP_03607360.1| hypothetical protein METSMIALI_00458 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434410|gb|EEE41575.1| hypothetical protein METSMIALI_00458 [Methanobrevibacter smithii
           DSM 2375]
          Length = 300

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K+   L +A  + +        V+D+G+ + G+ T  D+ R    +   L V D+M  N
Sbjct: 184 LKVSSTLKEAAEVFAFNDIKGAPVMDDGKAV-GVFTVTDLVRAIANNKEDLLVGDLMTTN 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++ ED  +  A++++ +  IS +++ D+    +GIV   DL+ 
Sbjct: 243 IVIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDLIN 287


>gi|82749903|ref|YP_415644.1| RpiR family transcriptional regulator [Staphylococcus aureus RF122]
 gi|82655434|emb|CAI79821.1| probable transcriptional regulator RpiR family [Staphylococcus
           aureus RF122]
          Length = 291

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 16/178 (8%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L++N +V+     +IA  R  +++       +  Q     + +K  +  + + G G S  
Sbjct: 87  LIENESVETLKNKMIA--RATNTMRFVATNIMDAQIDAICDVLKNART-IFLFGFGASSL 143

Query: 78  IGSKLASTLASTGTPSFFVHAAE------ASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
               L   L+  G     +H         A+H D       D +I ++  GS  EL++I 
Sbjct: 144 TIGDLFQKLSRIGLNVRLLHETHLLVSTFATHDD------RDCMIFVTNQGSHSELQSIA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L   +  E+    +  TTS   QL   D L
Sbjct: 198 QVATHYSIPIITISSTANNPVAQIADYALIYGRTDEN-EMRMVATTSLFAQLFTVDIL 254


>gi|331270537|ref|YP_004397029.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium botulinum BKT015925]
 gi|329127087|gb|AEB77032.1| Glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium botulinum BKT015925]
          Length = 378

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/92 (26%), Positives = 52/92 (56%), Gaps = 1/92 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ++ A  I+ E+    + VVD+   L GI+T  DI RN  ++ + + ++++M  +   I +
Sbjct: 267 VLQAAEIMHERHVDSILVVDKTNTLIGIVTLKDIRRN-RENYSKVMLKEIMETDVVCIHK 325

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D  +   ++++   N+  + VVDD +K +G++
Sbjct: 326 DKTIVDILEVMNVKNVGYIPVVDDGKKLLGLI 357


>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 148

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 27/124 (21%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFH-------------------- 277
           D   IL E R   V VVD+ Q++ G++TEGD+    +  H                    
Sbjct: 22  DVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQDKKLHTPAFLEILGGVIYLENPQRV 81

Query: 278 -KDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            KDL  ++   V ++M +    + EDT +     ++ +  ++ + VVD   K  GIV   
Sbjct: 82  AKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAAGKLTGIVSRQ 141

Query: 334 DLLR 337
           DL++
Sbjct: 142 DLVK 145


>gi|145596348|ref|YP_001160645.1| inosine-5'-monophosphate dehydrogenase [Salinispora tropica
           CNB-440]
 gi|145305685|gb|ABP56267.1| inosine-5'-monophosphate dehydrogenase [Salinispora tropica
           CNB-440]
          Length = 520

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 14/105 (13%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D  T+  + R   V VVD   +L GI+T  D+   F  D  T  V ++M + P V   
Sbjct: 134 LQDVDTLCGQYRISGVPVVDGDGQLVGIVTNRDM--RFVSDPAT-PVREIMTRTPLVTAP 190

Query: 298 -----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                ED     A+ LL+QH +  L +VD   K  G++   D  +
Sbjct: 191 VGVSKED-----ALGLLQQHKVEKLPIVDGAGKLRGLITVKDFTK 230


>gi|13542143|ref|NP_111831.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
          Length = 176

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 5/104 (4%)

Query: 239 LIDAITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           + DA+ I++E R +G +   +EG+ + G+I+E  I + F   +K  + + ++ VM K   
Sbjct: 20  VFDAVKIMNENRLYGLIVKDNEGKDV-GLISERSIIKRFIPRNKKPDEVQIKYVMRKPIP 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     +  A   L ++ +    VVD   K +GI+   DL R+
Sbjct: 79  KVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTDLSRY 122


>gi|187250704|ref|YP_001875186.1| malate dehydrogenase [Elusimicrobium minutum Pei191]
 gi|186970864|gb|ACC97849.1| Malate dehydrogenase [Elusimicrobium minutum Pei191]
          Length = 486

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ +   V ++++  KL GIIT  D+   F  D N++ + D+M K+  V  +
Sbjct: 107 LAEAKELAAKYKISGVPIINDNGKLIGIITNRDM--RFETD-NSVRIGDIMTKDNLVTAK 163

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A ++LR   I  L +VDD  K  G++   D+ +
Sbjct: 164 IGTSLKEAKEILRGKKIEKLPLVDDKFKLKGLITIKDIEK 203


>gi|154149618|ref|YP_001403236.1| signal transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|153998170|gb|ABS54593.1| putative signal transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 158

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
           +  PL DA+ IL E   G + V+D G+ L GIITE DI      HK    LS +D+ + +
Sbjct: 16  VNTPLRDAVAILREHHIGGLPVLD-GESLAGIITESDILAQLATHK----LS-DDLWLPS 69

Query: 293 PKVILE 298
           P  I+E
Sbjct: 70  PLEIIE 75


>gi|210621363|ref|ZP_03292599.1| hypothetical protein CLOHIR_00542 [Clostridium hiranonis DSM 13275]
 gi|210154787|gb|EEA85793.1| hypothetical protein CLOHIR_00542 [Clostridium hiranonis DSM 13275]
          Length = 383

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 18/52 (34%), Positives = 31/52 (59%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +  ED+MI+NP V +       A  ++R+H +  LMV+D+ +K +G V+  D
Sbjct: 258 IKAEDIMIENPIVCISRLKAIKAQNIMREHRVDSLMVIDENRKFLGKVYASD 309


>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
 gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
           cholodnii SP-6]
          Length = 158

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           + DA+ +++EK  G + +V EG++L GI+TE D  R      +      V D+M  +   
Sbjct: 37  VFDAVKLMAEKGIGAL-LVTEGEQLVGIVTERDYARKVALMSRSSRETPVRDIMTADVMF 95

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  D   +  M L+ ++ +  L V+ D  K +G++   DL++
Sbjct: 96  VRPDQTSSECMALMTENRLRHLPVMADG-KLLGLISIGDLVK 136


>gi|332296074|ref|YP_004437997.1| CBS domain containing protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179177|gb|AEE14866.1| CBS domain containing protein [Thermodesulfobium narugense DSM
           14796]
          Length = 867

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)

Query: 250 RFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           R+G   V + +G ++ G+++  DI +     L  + V+ +M +N   I +D  L  A +L
Sbjct: 341 RYGHSGVPILKGDEIVGVLSRKDIDKATQHRLGQIEVQKIMSRNVITINQDASLDEAQKL 400

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  I  L VV++  K +G++   D+LR
Sbjct: 401 MIEKEIGRLPVVNEKNKLVGLITRTDILR 429


>gi|296104684|ref|YP_003614830.1| RpiR family transcriptional regulator [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059143|gb|ADF63881.1| RpiR family transcriptional regulator [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 295

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 10/156 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A   +  G P+  ++       + L  + R D++++++   + 
Sbjct: 143 QVAIFGIGASGILAEYTARLFSRMGLPAMPLNRTGIGLAEQLIALQRGDVLVMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E +  L  A+R  IP I +T+   S  +  A +V+ +P+  E     L  T    +++ 
Sbjct: 203 REGQTTLREAKRLGIPTILLTNALDSRFSKEASVVIHVPRGGEKGKIPLHGTVLLCLEMI 262

Query: 185 IGDALAIALLESRNFSE-----NDFYV-LHPGGKLG 214
           I   L++A  E +   +     N+F+  L PG K G
Sbjct: 263 I---LSVASTEPQRTIKSMKRINEFHRGLKPGKKSG 295


>gi|302524088|ref|ZP_07276430.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. AA4]
 gi|302432983|gb|EFL04799.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. AA4]
          Length = 503

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQL 308
           R   V V D    L GIIT  D+   F  D +T  V +VM + P V  +       A+ L
Sbjct: 127 RISGVPVTDASGALVGIITNRDM--RFEVD-HTRLVSEVMTRTPLVTAQVGVTAEAALGL 183

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 184 LRRHKIEKLPIVDGAGKLRGLITVKDFVK 212


>gi|229823142|ref|ZP_04449211.1| hypothetical protein GCWU000282_00439 [Catonella morbi ATCC 51271]
 gi|229787308|gb|EEP23422.1| hypothetical protein GCWU000282_00439 [Catonella morbi ATCC 51271]
          Length = 277

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 47/167 (28%), Positives = 76/167 (45%), Gaps = 19/167 (11%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           S LQ E  +Q    ++ + +   R+++ G+G SG    +LA  L+  G P+        S
Sbjct: 102 SELQSE--YQLRQLIQ-VLSQANRIMVYGMGSSGLTARELAIRLSRMGLPA-------TS 151

Query: 103 HGDLGM------ITRD-DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
             D  M      +TR  D++I +S SG + ++   L  A++    L+AITS   S +A  
Sbjct: 152 ETDSHMMIISSTVTRSSDVVIAISNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKL 211

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AD  L +             T   I  L   DA+ + +LE+  FS+N
Sbjct: 212 ADETLLVHNSRFVNSEFFVNTQLPIFFLI--DAITLMMLENPVFSQN 256


>gi|225174850|ref|ZP_03728847.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
 gi|225169490|gb|EEG78287.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
          Length = 873

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G     VV+ G  L GII+  D+ +  H  L    V+  M K P+ +  DT +    Q
Sbjct: 335 RYGHSGFPVVENG-GLLGIISRRDLEKASHHGLGHAPVKGYMSKRPRTVPADTPVREIQQ 393

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ ++N+  L V D+    +GIV   D+LR
Sbjct: 394 LMIEYNLGRLPVTDEG-TIVGIVTRTDVLR 422


>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
 gi|158332181|dbj|BAF89666.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 143

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           L DA+  LSE R G +  VD+  +L GI++E D+ R       ++ +  V  VM +    
Sbjct: 23  LTDAVKSLSEHRIGAIVAVDDNGRLAGILSERDVVRILGVRGPEVLSEPVSAVMTRAVVT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D  +   M+ + +     + VV + ++ IGI+   D+++F +
Sbjct: 83  CARDETIQGIMERMTRGRFRHVPVV-EGERLIGIISIGDVVKFRV 126


>gi|75676331|ref|YP_318752.1| inositol-5-monophosphate dehydrogenase [Nitrobacter winogradskyi
           Nb-255]
 gi|74421201|gb|ABA05400.1| inosine-5'-monophosphate dehydrogenase [Nitrobacter winogradskyi
           Nb-255]
          Length = 498

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++S+  F  + VV  G      +L GI+T  D+   F  D      E +  +N 
Sbjct: 111 LSDALALMSDHGFSGIPVVAGGSGAAPGRLVGILTNRDV--RFATDPRQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQEEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|126174850|ref|YP_001050999.1| signal-transduction protein [Shewanella baltica OS155]
 gi|125998055|gb|ABN62130.1| cyclic nucleotide-binding protein [Shewanella baltica OS155]
          Length = 615

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILED 299
           A  ++   R   + V+D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVMD-NHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDQ-DKAIGMVTSTDILR 267


>gi|293571168|ref|ZP_06682206.1| sugar isomerase domain protein [Enterococcus faecium E980]
 gi|291608781|gb|EFF38065.1| sugar isomerase domain protein [Enterococcus faecium E980]
          Length = 334

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 39/166 (23%), Positives = 65/166 (39%), Gaps = 32/166 (19%)

Query: 58  EKIKAIKGRVV-------------------ITGIGKSGHIGSKLASTLASTGT---PSFF 95
           E+IKAIKG +                    +  +G  G   S + +     G    P F 
Sbjct: 8   EQIKAIKGALALRPQVEKIIDKLYTEKFDAVYYLGIGGTYASSMQAVTYMNGKSNLPVFV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
            HAAE        +T+D +++V S +G++ E+   +   ++    LI    + +S ++  
Sbjct: 68  QHAAEYYTTGNKRLTKDSIVVVSSVTGTTQEVVKAVEEIKKVGATLIGFIDKAESKLSQL 127

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            D V+T P          AP T  I    + D L     E  ++SE
Sbjct: 128 CDFVVTYP----------APGTEQIKFFMVADRLMYLHGEFEDYSE 163


>gi|258620553|ref|ZP_05715590.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258625875|ref|ZP_05720750.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581839|gb|EEW06713.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258587068|gb|EEW11780.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 76/174 (43%), Gaps = 6/174 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLA 87
           ++IA+K   +  ++      + +F    E I  I+   RV I G+G S   G  LA  L 
Sbjct: 96  AVIAQKLVQTKTDAMFHTTNALRFDEFSEAINWIQQAVRVQIIGLGGSALTGKDLAFKLL 155

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +     +         +   D++I +S+SG   E+      A++    +IA+T+ 
Sbjct: 156 KLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALTTP 215

Query: 148 NKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           NK+ +   AD+ L T+  E +     +A  T+   Q  + D + I L + R  S
Sbjct: 216 NKNRLRELADLALDTIADESQHRSSAIASRTA---QNVLTDLIFITLAQQRETS 266


>gi|239630644|ref|ZP_04673675.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526927|gb|EEQ65928.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 293

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+  S  +   L   L   G  + F H    +       T  D ++V S+SG + E
Sbjct: 117 IYLVGVSASALVAQDLYLKLIRAGYVAIFDHDTHTAVERAYYTTPADAMVVFSYSGLTKE 176

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK-EP 166
           +      ARR   P+IA+T    S +   A  V+ LP  EP
Sbjct: 177 VVLAAQQARRNQTPVIAVTRHEPSPLREAASCVIALPPTEP 217


>gi|164687030|ref|ZP_02211058.1| hypothetical protein CLOBAR_00656 [Clostridium bartlettii DSM
           16795]
 gi|164603915|gb|EDQ97380.1| hypothetical protein CLOBAR_00656 [Clostridium bartlettii DSM
           16795]
          Length = 489

 Score = 38.5 bits (88), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  + DA  I+++ +   V +VDE   L GIIT  DI   F  D+ +  +E+ M     +
Sbjct: 103 GHTIQDADDIMAKYKISGVPIVDENNILIGIITNRDI--KFETDM-SRKIEEAMTTQEHL 159

Query: 296 IL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   E   L  A  +L +H I  L +VDD     G++   D+ +
Sbjct: 160 VTAKEGVTLEQAKDILGKHRIEKLPIVDDEGHLKGLITIKDIEK 203


>gi|262196345|ref|YP_003267554.1| signal transduction protein with CBS domains [Haliangium ochraceum
           DSM 14365]
 gi|262079692|gb|ACY15661.1| putative signal transduction protein with CBS domains [Haliangium
           ochraceum DSM 14365]
          Length = 155

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 4/102 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+  AI  + + ++ C  V+D G  L GI TE D          D     V DVM   P+
Sbjct: 25  PVTAAIAAMKKSKWDCALVLD-GDTLVGIFTERDFLYRVSAAQADPAATKVRDVMTAEPE 83

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     +  A+  +       + +VDD  KA+ ++   D++
Sbjct: 84  TLRPQDSIAYAINRMVVRGFRNVPIVDDDGKAVAVLDVRDVM 125


>gi|255532414|ref|YP_003092786.1| chloride channel core [Pedobacter heparinus DSM 2366]
 gi|255345398|gb|ACU04724.1| Chloride channel core [Pedobacter heparinus DSM 2366]
          Length = 594

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 1/86 (1%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           IL  KR     VV   Q  KG++   D+ +    + +TL+V+D+M   P V +    L  
Sbjct: 489 ILQSKR-NLFPVVGNEQDFKGLLYVEDLLKKGISNSDTLAVQDLMQTAPDVAVISDSLKH 547

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIV 330
            +Q + + N  +L V+D+  K +G+V
Sbjct: 548 LLQKMEKENAWLLPVLDEQGKYLGLV 573


>gi|220918932|ref|YP_002494236.1| Pyridoxal-5'-phosphate-dependent protein beta subunit
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219956786|gb|ACL67170.1| Pyridoxal-5'-phosphate-dependent protein beta subunit
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 459

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 23/30 (76%)

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++H+IS + VVDD  +AIG++H  DLL F
Sbjct: 362 MKEHDISQMPVVDDTGRAIGMIHEYDLLNF 391


>gi|218883563|ref|YP_002427945.1| putative signal-transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
 gi|218765179|gb|ACL10578.1| putative signal-transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
          Length = 132

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVILED 299
           A  ++ E     V VV+    L GI+T  D+       K    + V   M +NP  I  D
Sbjct: 25  AAKLMFENNTSSVIVVNSDGLLTGIVTAKDVVAAVALGKIGQDIPVARFMKENPLTISPD 84

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +T A++ +R+ N+  L VVD   K +G+V   D++
Sbjct: 85  AHITEALEKMREFNVRHLPVVDKNNKPVGMVSVRDIM 121


>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 182

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 5/105 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPK 294
           P+ DA+   +    GC+   D+   + G+++E D         +      V+++  +   
Sbjct: 51  PVYDAVQKFAAFNIGCLVTTDKAGNMTGVVSERDYICKIALLGRTSKETPVKEIATRGAN 110

Query: 295 VILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +I      +V   M+ +    I  L +VDD +K IG+V   DL++
Sbjct: 111 IITAKAGESVESCMEKMMSKGIRHLPIVDDAEKVIGMVSIKDLVK 155


>gi|167759980|ref|ZP_02432107.1| hypothetical protein CLOSCI_02352 [Clostridium scindens ATCC 35704]
 gi|167662599|gb|EDS06729.1| hypothetical protein CLOSCI_02352 [Clostridium scindens ATCC 35704]
          Length = 285

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 2/121 (1%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I  +G +  +   +   L   G  S +  AAE     + +  +DDL+I +S SG+S ++ 
Sbjct: 140 IMAVGNTCPLAQYMGFRLGRLGIKSTYNVAAEYFMNHVNLADQDDLLIAISQSGTSRQVI 199

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L   +   +  IAIT+  +S V+  AD VL    + E  P       + + + A+ DA
Sbjct: 200 QGLELGKEKGLKSIAITAFAQSPVSNLADYVLLSAGKEE--PFSFYKGYAHMNETAVIDA 257

Query: 189 L 189
           L
Sbjct: 258 L 258


>gi|154151770|ref|YP_001405388.1| signal-transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|154000322|gb|ABS56745.1| putative signal-transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 188

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)

Query: 221 SDVMHSGDSIP-LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK 278
           SDVM      P ++ I   +  A   +  +  G V +++  + + GI+TE DI  +   K
Sbjct: 17  SDVMKRN---PIMISIEANVAKAAKAMCREEVGSVIILERNEPI-GIVTEEDINCKVVAK 72

Query: 279 DLNTLSVE-DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL   SV+ + ++  P + +  D  +  A Q++ +H +  L VVD   K IGIV   DLL
Sbjct: 73  DLKPSSVQVNTIMSTPLITVSADKTVVDAAQMMVKHRVRRLPVVDKAGKVIGIVTVRDLL 132


>gi|86609597|ref|YP_478359.1| chloride channel (ClC) family protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558139|gb|ABD03096.1| chloride transporter, chloride channel family [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 623

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 57/105 (54%), Gaps = 6/105 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HK---DLNTLSVED 287
           L++   PL +A+  L +++     VVD  ++L+GI+T  D+ R   HK   +L  L+V++
Sbjct: 473 LLRQDTPLREALESLLQQKCHSALVVDGQERLRGILTLEDLERALAHKEAAELAELTVQE 532

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIV 330
           V          D  + VA + + ++++  L VV  +D ++ +G++
Sbjct: 533 VSQSPVLTTFPDEAVAVAAEPMYEYDLRQLPVVSREDPEQIVGLL 577


>gi|22297689|ref|NP_680936.1| putative chloride channel protein [Thermosynechococcus elongatus
           BP-1]
 gi|22293866|dbj|BAC07698.1| tll0145 [Thermosynechococcus elongatus BP-1]
          Length = 628

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 55/120 (45%), Gaps = 17/120 (14%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFH 277
           S V+   ++ P+V+ G  LI       EK+  C  V D  Q L G+IT GDI R    + 
Sbjct: 471 SPVLFLSEATPVVEAGLQLI-------EKKVYCAFVTDSQQDLMGLITLGDISRVLTRWE 523

Query: 278 KDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIV 330
            D  T      +V  V  +N  +   D  L  A+  +   ++  L VVD  + Q+ +G++
Sbjct: 524 ADQETTAYPTQTVGSVCTRNLLLAYSDEPLKDAIDRMAARDLRQLPVVDRNNPQRVLGLL 583


>gi|22298062|ref|NP_681309.1| polyA polymerase [Thermosynechococcus elongatus BP-1]
 gi|22294240|dbj|BAC08071.1| tll0519 [Thermosynechococcus elongatus BP-1]
          Length = 907

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            A+++M S   +  V+   P+ DA  +L       ++VV    +L GII+  D+    H 
Sbjct: 310 TAAELMSS--PVRTVRPETPIADAHRVLLRYGHSGLSVVSAEGELLGIISRRDLDVALHH 367

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 V+  M    + I   T L     L+ Q++I  L VV+D    +GIV   D+LR
Sbjct: 368 GFAHAPVKGYMKAPVRTISPTTPLPEIQALMVQYDIGRLPVVNDQGDLVGIVTRTDVLR 426


>gi|322514471|ref|ZP_08067510.1| RpiR family transcriptional regulator [Actinobacillus ureae ATCC
           25976]
 gi|322119610|gb|EFX91681.1| RpiR family transcriptional regulator [Actinobacillus ureae ATCC
           25976]
          Length = 290

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 12/138 (8%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +Q +L ++IAE   L          L FQ     V++++  + R+ + G+G SG      
Sbjct: 106 LQSSLNNVIAETINL----------LDFQELENVVKELQKAQ-RIFLFGVGSSGLTAEDA 154

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
              L   G  +  V      +    ++   D++I +S SG SDE+ + L  AR+ +   +
Sbjct: 155 KHKLMRIGLQTDAVTNNHFMYMQASLLREGDVVIGISHSGYSDEVISSLRIARKNNAKTV 214

Query: 143 AITSENKSVVACHADIVL 160
           AIT   +S +   AD VL
Sbjct: 215 AITHYIRSPITNVADYVL 232


>gi|309792492|ref|ZP_07686956.1| putative signal transduction protein with CBS domains
           [Oscillochloris trichoides DG6]
 gi|308225480|gb|EFO79244.1| putative signal transduction protein with CBS domains
           [Oscillochloris trichoides DG6]
          Length = 133

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 63/126 (50%), Gaps = 12/126 (9%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-----IFRN 275
           S+VMH G  +       P+ D    ++E+    + VVDE   + G+I+  D     ++  
Sbjct: 6   SEVMHRG--VLTCSRETPVQDVARQMTEQDISALVVVDEVGNMIGLISRTDLVNARLYEQ 63

Query: 276 FHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVH 331
           + K+   L+   +M+ +   V  ED+L   + +++ +H I  ++V++D     + IG++ 
Sbjct: 64  YWKNWRGLTAGHIMVTDVVSVRPEDSLQYASRRMMERH-IHRVVVIEDADGGVRPIGVLS 122

Query: 332 FLDLLR 337
             DL+R
Sbjct: 123 ITDLVR 128


>gi|260888355|ref|ZP_05899618.1| CBS domain protein/ACT domain protein [Selenomonas sputigena ATCC
           35185]
 gi|260861891|gb|EEX76391.1| CBS domain protein/ACT domain protein [Selenomonas sputigena ATCC
           35185]
          Length = 242

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T+ V + M KNP  +  DT ++ A  L+++H    L VVD+  K +G +   D++R
Sbjct: 26  TMFVANRMAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMR 81


>gi|288574935|ref|ZP_06393292.1| inosine-5'-monophosphate dehydrogenase [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570676|gb|EFC92233.1| inosine-5'-monophosphate dehydrogenase [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 491

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 6/85 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           L  A+ ++S      V +VD+G+KL GIIT  D+    ++ + ++ +   + +I  P   
Sbjct: 110 LSQALELMSHYHISGVPIVDDGKKLVGIITNRDLRFIHDYDQPISEVMTWENLITAP--- 166

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVD 321
            E T L  A Q+L  H +  L +VD
Sbjct: 167 -EGTTLDDAQQILMCHKVEKLPIVD 190


>gi|254169279|ref|ZP_04876111.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289596725|ref|YP_003483421.1| transcriptional regulator, XRE family [Aciduliprofundum boonei
           T469]
 gi|197621756|gb|EDY34339.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289534512|gb|ADD08859.1| transcriptional regulator, XRE family [Aciduliprofundum boonei
           T469]
          Length = 184

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE 298
           A  ++ E     + VV E  K+ G+ITE DI   + K    +  L VEDVM   P  + +
Sbjct: 88  ARELMKEHGISQIPVV-ERDKVVGMITENDILEGYEKHGAGIVDLLVEDVMGPPPIAVRK 146

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           DT +   ++LL+Q     L+VV++ +  +GI+   D++  G
Sbjct: 147 DTSMDAIVELLKQEQ--ALLVVENDE-LLGIITKADIVYKG 184


>gi|147863576|emb|CAN79772.1| hypothetical protein VITISV_019408 [Vitis vinifera]
          Length = 569

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM +NP  
Sbjct: 69  IYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIF 128

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 129 VLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166


>gi|14521642|ref|NP_127118.1| dehydrogenase [Pyrococcus abyssi GE5]
 gi|5458861|emb|CAB50348.1| Dehydrogenase, substrate unknown [Pyrococcus abyssi GE5]
          Length = 392

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 55/110 (50%), Gaps = 15/110 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRNFHKDLN-------TLSVE 286
           A+  + +     + VVDE  KL+G++T  D+        F+  + +L        ++ + 
Sbjct: 152 ALATMRDHGISRIPVVDEEGKLEGLVTLHDLIIRFIKPRFKAQYGELAGEKIPPFSMKLR 211

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + MIK    I+ +  +  A+  ++ +NI  L+VVD+  K +GI+   DLL
Sbjct: 212 EAMIKGVITIMPEATIREAVSTMKDNNIDGLVVVDENNKVVGILTVKDLL 261


>gi|302387252|ref|YP_003823074.1| Nucleotidyl transferase [Clostridium saccharolyticum WM1]
 gi|302197880|gb|ADL05451.1| Nucleotidyl transferase [Clostridium saccharolyticum WM1]
          Length = 348

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 58/100 (58%), Gaps = 3/100 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV 295
           C + +AI  L ++    + VV+E  KL G++T+GDI R   K+ + ++ V  +M  +P V
Sbjct: 12  CSIREAIRQL-DQTAKKILVVEEDHKLAGVLTDGDIRRWILKNKDISMPVRLIMNTSPIV 70

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           I ++    +A++++R+  I  L +V+D  +   I+ + +L
Sbjct: 71  IKKEK-SHLALEIMREKQIEGLPLVNDNNQVTDILFWNEL 109


>gi|320009034|gb|ADW03884.1| inosine-5'-monophosphate dehydrogenase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 500

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V   
Sbjct: 114 LGEADALCAKFRISGVPVTDPAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGR 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  V AM+LLR+H I  L +VDD     G++   D 
Sbjct: 171 VGISGVEAMELLRRHKIEKLPLVDDAGILKGLITVKDF 208


>gi|259907684|ref|YP_002648040.1| N-acetylmuramic acid-6-phosphate etherase [Erwinia pyrifoliae
           Ep1/96]
 gi|224963306|emb|CAX54791.1| Putative phosphosugar-binding protein [Erwinia pyrifoliae Ep1/96]
 gi|283477536|emb|CAY73452.1| N-acetylmuramic acid 6-phosphate etherase [Erwinia pyrifoliae DSM
           12163]
          Length = 301

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD--LGM- 108
           GR++  G G SG +G   AS    T             G P+  V + E +  D  LG+ 
Sbjct: 63  GRLIYIGAGTSGRLGVLDASECPPTFGVANGVVIGLIAGGPAALVTSIEGAEDDEQLGIS 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I  +D+++ L+ SG +  + A L YAR+       I+    S +A  A+I ++ 
Sbjct: 123 DLQALKINANDMVVGLAASGRTPYVTAALRYARQLGCRTAGISCNPHSPLALAAEIAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 LVGPEA 188


>gi|158430320|pdb|2QLV|C Chain C, Crystal Structure Of The Heterotrimer Core Of The S.
           Cerevisiae Ampk Homolog Snf1
 gi|158430323|pdb|2QLV|F Chain F, Crystal Structure Of The Heterotrimer Core Of The S.
           Cerevisiae Ampk Homolog Snf1
          Length = 315

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L++ R   V ++DE   L  +    D+
Sbjct: 182 IGDLNIITQDNMKS------CQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDV 235

Query: 273 F----RNFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 236 LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 294

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 295 VGRLVGVLTLSDILKY 310


>gi|119873368|ref|YP_931375.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674776|gb|ABL89032.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 145

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           D   I++EK+ G V +VD+ Q   + G+++E DI R    +++  L  +++M  +P + +
Sbjct: 25  DIARIMAEKKIGLVVIVDKSQPDVVVGVVSERDIVRAVANNIDVNLPAKEIM-TSPVITI 83

Query: 298 E-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E D  +    +++ +HNI   +VV    K  G++   DL+
Sbjct: 84  EGDEPIWNVAKIMHEHNIR-HVVVTKGGKLFGVISIRDLV 122


>gi|320100838|ref|YP_004176430.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
 gi|319753190|gb|ADV64948.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
          Length = 141

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 6/119 (5%)

Query: 221 SDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FH 277
           SD+M +    P+ +K   P+  A  ++ E     V VV+    L GI+T  D+       
Sbjct: 15  SDIMSTP---PITIKETEPVEKAAKLMFENNTSSVIVVNNDGVLTGIVTAKDVVAAVALG 71

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + V   M +NP  I  D  +T A++ +R+ N+  L VVD   + IG+V   D++
Sbjct: 72  RIGQGIPVGRFMKENPLTISPDASITDALEKMREFNVRHLPVVDKDNRPIGMVSVRDIM 130


>gi|307718088|ref|YP_003873620.1| sodium/hydrogen exchanger family protein [Spirochaeta thermophila
           DSM 6192]
 gi|306531813|gb|ADN01347.1| sodium/hydrogen exchanger family protein [Spirochaeta thermophila
           DSM 6192]
          Length = 557

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 18/138 (13%)

Query: 207 LHPGGKLGTLFVCASDVM--HS-GDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDE 259
           L   G+ G L V   D++  HS  D +P  +   P    L + + + +E  +   AVVD 
Sbjct: 404 LEKAGEAG-LNVTEEDILTRHSVADVLPADRAVVPNTIRLSELLRLYAEHDWNVWAVVDA 462

Query: 260 GQKLKGIITEGDIFRNFHKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             + +G++     F N  + L        +  ED++   P+ +   T L  A++++R+ N
Sbjct: 463 EGRYRGVVG----FENLREALAEPELQEFVIAEDILTPFPETVHPHTPLHEALRIMRRRN 518

Query: 314 ISVLMVVDDCQKAIGIVH 331
           +  L V+DD    +GI+ 
Sbjct: 519 VDFLPVLDDRGHVLGILE 536


>gi|304315353|ref|YP_003850500.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588812|gb|ADL59187.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 278

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 9/93 (9%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKD--------LNTLSVEDVMIKNPKVILEDTLLTVA 305
           V VVD   K  GI+TE DI R    D        ++ +S+  VM +NP  +  +     A
Sbjct: 35  VVVVDSEGKPAGIVTETDITRKLRIDGPAWKRRPIDKISIRRVMNENPISVDINATPREA 94

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L+ +  I  L+V++  + A GI+   DLLRF
Sbjct: 95  ADLMLKKKIGSLLVMEGEELA-GIITKRDLLRF 126



 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V I     +A  ++ +K+ G + V+ EG++L GIIT+ D+ R F KD       VED+M 
Sbjct: 85  VDINATPREAADLMLKKKIGSLLVM-EGEELAGIITKRDLLR-FFKDRCAGRWKVEDLMT 142

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           ++ K +  +  L   + ++ ++ IS ++V
Sbjct: 143 RDVKTVTANHTLAHVIDVMEENGISRVVV 171


>gi|126652880|ref|ZP_01725023.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus sp. B14905]
 gi|126590300|gb|EAZ84421.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus sp. B14905]
          Length = 315

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)

Query: 65  GRVVITGIGKSGHIG--------------SKLASTLASTGTPSFFVHAAEASHGDLGM-- 108
           GR+   G G SG IG               KL   + + G+ +  + A E +  DL +  
Sbjct: 78  GRLFYVGAGTSGRIGLLDAVECPPTFSTSPKLVQAILAGGSEAVMI-AIEGAEDDLSLGR 136

Query: 109 -------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
                  +T  D++I ++ SG +  +K  L YA++     I++ S  +S ++ + DI + 
Sbjct: 137 QELENQRLTNLDIVIGIAASGRTPFVKGALNYAQQMRAKTISLVSNARSTISENVDIAIE 196

Query: 162 LPKEPE 167
           +   PE
Sbjct: 197 VITGPE 202


>gi|126134473|ref|XP_001383761.1| 5'-AMP-activated protein kinase, gamma subunit [Scheffersomyces
           stipitis CBS 6054]
 gi|126095910|gb|ABN65732.1| 5'-AMP-activated protein kinase, gamma subunit [Scheffersomyces
           stipitis CBS 6054]
          Length = 338

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMI 290
           +  P+I+ I +L+ K    V +VD   KL  +    DI        + DL+ LSV D ++
Sbjct: 220 MNTPVIEVIHLLAHKSVSSVPIVDAQGKLINVYEAVDILALVKGGMYTDLD-LSVGDALL 278

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P+         + D L T+ M  +R+  +  L VVD+  K + ++   D+L +
Sbjct: 279 RRPEEFEGVHTCTMNDRLSTI-MDTIRKSRLHRLFVVDEEGKLVSVITLSDILNY 332


>gi|86160124|ref|YP_466909.1| cystathionine beta-synthase [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776635|gb|ABC83472.1| cystathionine beta-synthase [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 459

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 15/33 (45%), Positives = 25/33 (75%)

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ +++H+IS + VVDD  +AIG++H  DLL F
Sbjct: 359 VKKMKEHDISQMPVVDDTGRAIGMIHEYDLLNF 391


>gi|6321323|ref|NP_011400.1| Snf4p [Saccharomyces cerevisiae S288c]
 gi|115689|sp|P12904|SNF4_YEAST RecName: Full=Nuclear protein SNF4; AltName: Full=Regulatory
           protein CAT3
 gi|171165|gb|AAA34472.1| regulatory protein CAT3 [Saccharomyces cerevisiae]
 gi|172636|gb|AAA35061.1| SNF4 protein [Saccharomyces cerevisiae]
 gi|1322667|emb|CAA96823.1| SNF4 [Saccharomyces cerevisiae]
 gi|190407068|gb|EDV10335.1| nuclear protein SNF4 [Saccharomyces cerevisiae RM11-1a]
 gi|207345399|gb|EDZ72233.1| YGL115Wp-like protein [Saccharomyces cerevisiae AWRI1631]
 gi|256273215|gb|EEU08162.1| Snf4p [Saccharomyces cerevisiae JAY291]
 gi|259146394|emb|CAY79651.1| Snf4p [Saccharomyces cerevisiae EC1118]
 gi|285812093|tpg|DAA07993.1| TPA: Snf4p [Saccharomyces cerevisiae S288c]
 gi|323333659|gb|EGA75052.1| Snf4p [Saccharomyces cerevisiae AWRI796]
 gi|323337576|gb|EGA78821.1| Snf4p [Saccharomyces cerevisiae Vin13]
 gi|323348636|gb|EGA82879.1| Snf4p [Saccharomyces cerevisiae Lalvin QA23]
 gi|328496225|gb|AEB21263.1| activating gamma subunit of the AMP-activated Snf1p kinase complex
           [Saccharomyces cerevisiae]
          Length = 322

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L++ R   V ++DE   L  +    D+
Sbjct: 188 IGDLNIITQDNMKS------CQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDV 241

Query: 273 F----RNFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 242 LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 300

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 301 VGRLVGVLTLSDILKY 316


>gi|289548974|ref|YP_003473962.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM
           14484]
 gi|289182591|gb|ADC89835.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM
           14484]
          Length = 484

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 26/101 (25%), Positives = 56/101 (55%), Gaps = 10/101 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNT-LSVEDVMIKNPKVI 296
           A+ I+S+ +   V VV +G KL GI+T  D+      ++ K ++  ++ E++++    V 
Sbjct: 107 ALDIMSKYKISGVPVVTDGNKLVGILTNRDLRFIKPTDYDKPVSLFMTKENLIVAQELVT 166

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LE+     A ++L++H +  L +VD   + +G++   D+ +
Sbjct: 167 LEE-----AEEILQRHKVEKLPIVDKEGRLVGLITIKDITK 202


>gi|187778221|ref|ZP_02994694.1| hypothetical protein CLOSPO_01813 [Clostridium sporogenes ATCC
           15579]
 gi|187775149|gb|EDU38951.1| hypothetical protein CLOSPO_01813 [Clostridium sporogenes ATCC
           15579]
          Length = 131

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A+ ++SE       V +E   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 27  ALNLMSENNINGAPVANEEGNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 86

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 87  EDVISIAKKILDK-DIIAMPIVDSSKKLLGIVSIEDILK 124


>gi|251794125|ref|YP_003008856.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247541751|gb|ACS98769.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. JDR-2]
          Length = 485

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ + R   V +VD  QKL GI+T  D+   F  D  ++ + +VM +   V     
Sbjct: 110 DAEELMGKYRISGVPIVDSEQKLVGILTNRDL--RFVHDY-SIKINEVMTRTDLVTAPVG 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  LL++H I  L +VD+     G++   D+
Sbjct: 167 TTLQEAEGLLQKHKIEKLPLVDENNTLKGLITIKDI 202


>gi|169826356|ref|YP_001696514.1| N-acetylmuramic acid 6-phosphate etherase 2 [Lysinibacillus
           sphaericus C3-41]
 gi|168990844|gb|ACA38384.1| N-acetylmuramic acid 6-phosphate etherase 2 [Lysinibacillus
           sphaericus C3-41]
          Length = 301

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 56/126 (44%), Gaps = 24/126 (19%)

Query: 65  GRVVITGIGKSGHIG--------------SKLASTLASTGTPSFFVHAAEASHGDLGM-- 108
           GR+   G G SG IG               KL   + + G+ +  + A E +  DL +  
Sbjct: 64  GRLFYVGAGTSGRIGLLDAVECPPTFSTSPKLVQAILAGGSEAVMI-AIEGAEDDLSLGR 122

Query: 109 -------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
                  +T  D++I ++ SG +  +K  L YA++     I++ S  +S ++ + DI + 
Sbjct: 123 QELEKQRLTNLDIVIGIAASGRTPFVKGALNYAQQIGAKTISLVSNARSTISENVDIAIE 182

Query: 162 LPKEPE 167
           +   PE
Sbjct: 183 VITGPE 188


>gi|297619556|ref|YP_003707661.1| hypothetical protein Mvol_1031 [Methanococcus voltae A3]
 gi|297378533|gb|ADI36688.1| protein of unknown function DUF39 [Methanococcus voltae A3]
          Length = 509

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  +L E     + +VDE   + GIIT  DI +   +  + +S  D+M +       D 
Sbjct: 409 EASKVLIENNINHLPIVDENDCIMGIITSWDIAKAMAQSKSAIS--DIMTRYVVWASPDE 466

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +  + +  +NIS L +VD+ +K +G++   D+ + 
Sbjct: 467 PIEMVAKKMSANNISGLPIVDNNKKVLGVISAEDISKL 504


>gi|91773708|ref|YP_566400.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712723|gb|ABE52650.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 279

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/125 (24%), Positives = 68/125 (54%), Gaps = 12/125 (9%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---- 276
           SD+M S   + +++   P+  A  ++   +   + VV EG K+ GI+T+ D+ R      
Sbjct: 4   SDIMSS--PVYVMEPEEPVSHARKLMLRHKISTIVVV-EGNKMVGIVTKSDLGRRLAQAE 60

Query: 277 ----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + ++ + V+ +M ++P  I +D  ++ A  L+  ++I+ + VV++ +  +GIV  
Sbjct: 61  PMWRRRPIDKVPVKMIMTEDPVTIYKDASVSQATALMVDNDINNIPVVNNGE-LVGIVTR 119

Query: 333 LDLLR 337
           +D++R
Sbjct: 120 VDVVR 124


>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 154

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 53/131 (40%), Gaps = 34/131 (25%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL-------------- 283
           D I I  E +     V+++  KL GII+E DI +      +DLN +              
Sbjct: 21  DVIKIFRENKISGAPVLNKDGKLVGIISESDIIKTIVTHDEDLNLILPSPLDLIELPLKT 80

Query: 284 -----------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                             V+D+M K   V   D  +  A +L+ +HNI  L VVDD    
Sbjct: 81  ALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKLMVEHNIKRLPVVDDEGNL 140

Query: 327 IGIVHFLDLLR 337
           IGIV   DL+ 
Sbjct: 141 IGIVTRGDLIE 151


>gi|116496197|ref|YP_807931.1| transcriptional regulator [Lactobacillus casei ATCC 334]
 gi|227532814|ref|ZP_03962863.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|301067798|ref|YP_003789821.1| transcriptional regulator [Lactobacillus casei str. Zhang]
 gi|116106347|gb|ABJ71489.1| transcriptional regulator, RpiR family [Lactobacillus casei ATCC
           334]
 gi|227189555|gb|EEI69622.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|300440205|gb|ADK19971.1| Transcriptional regulator [Lactobacillus casei str. Zhang]
          Length = 310

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+  S  +   L   L   G  + F H    +       T  D ++V S+SG + E
Sbjct: 134 IYLVGVSASALVAQDLYLKLIRAGYVAIFDHDTHTAVERAYYTTPADAMVVFSYSGLTKE 193

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK-EP 166
           +      ARR   P+IA+T    S +   A  V+ LP  EP
Sbjct: 194 VVLAAQQARRNQTPVIAVTRHEPSPLREAASCVIALPPTEP 234


>gi|325000823|ref|ZP_08121935.1| inosine-5'-monophosphate dehydrogenase [Pseudonocardia sp. P1]
          Length = 503

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D   + ++ R   V V DEG +L GIIT  D+      D     V +VM + P V  +
Sbjct: 114 LSDVDALCAKFRISGVPVTDEGGRLVGIITNRDMRYEVDTD---RPVSEVMTRAPLVTAK 170

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  A+ LLR+H +  L +VD      G++   D 
Sbjct: 171 VGVTAEAALGLLRRHKLEKLPIVDGDDVLRGLITIKDF 208


>gi|254454465|ref|ZP_05067902.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
 gi|198268871|gb|EDY93141.1| conserved hypothetical protein [Octadecabacter antarcticus 238]
          Length = 123

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 14/33 (42%), Positives = 24/33 (72%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +ID + I+S +RF C+ VVD+  ++K + T+GD
Sbjct: 39  MIDWLRIMSNERFRCLPVVDDEGRIKAVFTQGD 71


>gi|239828029|ref|YP_002950653.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. WCH70]
 gi|239808322|gb|ACS25387.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. WCH70]
          Length = 438

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 230 IPLVKIGC-----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           IPL K        P+     +  E R     VVD+  K++G++T  D+  +F + L    
Sbjct: 197 IPLEKTAYLYTTDPIERWYELNRETRHSRFPVVDQQLKVQGVVTTKDVL-DFDRKL---P 252

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E  M K+P  +   T +  A  ++    I +L VVD+  +  GI+   D+L+
Sbjct: 253 IEKAMTKHPITVKGKTSVASASHIMVWEGIELLPVVDEHNRLQGIISRQDVLK 305


>gi|170754720|ref|YP_001781269.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|169119932|gb|ACA43768.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum B1 str. Okra]
          Length = 381

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     VE+VM K PK +LE
Sbjct: 271 LLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDK---LVEEVMNKEPKYVLE 327

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DT L   +          L V D   K +G++
Sbjct: 328 DTSLPELLDKFNNLKRGYLPVRDSEGKLLGLI 359


>gi|148555441|ref|YP_001263023.1| signal-transduction protein [Sphingomonas wittichii RW1]
 gi|148500631|gb|ABQ68885.1| putative signal-transduction protein with CBS domains [Sphingomonas
           wittichii RW1]
          Length = 143

 Score = 38.5 bits (88), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 57/113 (50%), Gaps = 5/113 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---S 284
           +SI  V +  P+++A+ +L++KR G V V+ E +++ GI++E D+     +D        
Sbjct: 13  NSIISVSLDMPVVEALALLADKRIGAVPVI-EREQVVGILSERDMIYGMRRDGAAFLDRP 71

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M      +   T    A+ ++ +  I  L VVDD    +G V   DL++
Sbjct: 72  VREAMTSPVITVTSVTTPLEALAMMTRRRIRHLPVVDDG-VLVGFVSIGDLVK 123


>gi|56412552|ref|YP_149627.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361487|ref|YP_002141123.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56126809|gb|AAV76315.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197092963|emb|CAR58393.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATHCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|331684670|ref|ZP_08385262.1| putative transcriptional regulator [Escherichia coli H299]
 gi|331078285|gb|EGI49491.1| putative transcriptional regulator [Escherichia coli H299]
          Length = 295

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E   +L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTMLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|229544281|ref|ZP_04433340.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
 gi|229325420|gb|EEN91096.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
          Length = 153

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 26/131 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------ 274
           VK    + + + +L+  R G V VVD   KL G+I++GD+ R                  
Sbjct: 14  VKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRFLQPKARTVYDFYITIVV 73

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTV--------AMQLLRQHNISVLMVVDDCQKA 326
           N  +D N   V  +     K++    L TV        A+++L +H+   L VV+   + 
Sbjct: 74  NEQEDFNEKLVHSLDFPVEKIMKRRELYTVRPEDDFENALRILAKHHFKKLPVVNQAGRV 133

Query: 327 IGIVHFLDLLR 337
           +G++   D++R
Sbjct: 134 VGVISRGDIMR 144


>gi|225406853|ref|ZP_03761042.1| hypothetical protein CLOSTASPAR_05074 [Clostridium asparagiforme
           DSM 15981]
 gi|225042609|gb|EEG52855.1| hypothetical protein CLOSTASPAR_05074 [Clostridium asparagiforme
           DSM 15981]
          Length = 182

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 6/130 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           + LE +L G    +    V+ +   K R+ + G G++G +   +A TLA  G P   V  
Sbjct: 11  AELEEALLGIDEARLSQLVDALLGAK-RIFVAGAGRTGLLMKSMAMTLAQCGLPVEAVGE 69

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
              +H     I   DL+++ S SGS+  ++     AR     L  IT+  +S VA  +  
Sbjct: 70  V-TTHA----IGEGDLLVIGSASGSTKTMRLFAETARSCGAALALITTHERSAVADISGC 124

Query: 159 VLTLPKEPES 168
           VL +    ++
Sbjct: 125 VLVMHSRSDT 134


>gi|197264450|ref|ZP_03164524.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200387417|ref|ZP_03214029.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|197242705|gb|EDY25325.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199604515|gb|EDZ03060.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATHCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|159905282|ref|YP_001548944.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159886775|gb|ABX01712.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 303

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 25/98 (25%), Positives = 53/98 (54%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  +L +     + V+D G+KL G+++  D+     + L   +V  +M +    I ++ 
Sbjct: 192 NAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEAVSRGLENENVTKLMAERIYTISKNE 250

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A+ L+ +HN+  L+V+D+ + A+GI+   D+L  
Sbjct: 251 KIYDALILMEKHNVGRLIVLDNEEYAVGILTRTDILNL 288


>gi|254254157|ref|ZP_04947474.1| hypothetical protein BDAG_03447 [Burkholderia dolosa AUO158]
 gi|124898802|gb|EAY70645.1| hypothetical protein BDAG_03447 [Burkholderia dolosa AUO158]
          Length = 515

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 38/75 (50%), Gaps = 1/75 (1%)

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           L+ ++ E +I + + +    L   D+M K+   +   T +  A+ LL +H +  L VVD 
Sbjct: 351 LETLLRETEI-QAYTRTFGQLKCADLMTKDAVSVAPSTSIAAAIALLDRHRVKALPVVDA 409

Query: 323 CQKAIGIVHFLDLLR 337
             + IGIV   DL R
Sbjct: 410 DARLIGIVTRADLTR 424


>gi|41582343|gb|AAS07957.1| CBS domain protein [uncultured marine bacterium 463]
          Length = 133

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 22/58 (37%), Positives = 35/58 (60%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+++S+ D M+ +P  +  D  +  AMQ++  + IS L VVDD    +GI+  LD LR
Sbjct: 2   LHSVSLRDYMLPHPVKVKADANMLEAMQIIIDNKISGLCVVDDTNNLVGILSELDCLR 59


>gi|307298828|ref|ZP_07578630.1| 6-phospho 3-hexuloisomerase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915253|gb|EFN45638.1| 6-phospho 3-hexuloisomerase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 186

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHA-AEASHGDLGMITRDDLIIVLSWSGSS 124
           RV +  +G+SG      A  L   G     VH   E +   LG     DL+I+ S SG +
Sbjct: 38  RVFLFAMGRSGLAIKAFAMRLMHLG---LKVHVVGEVTSPSLG---EGDLLIIGSASGET 91

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             +      AR+F   + +IT+  +S VA  +DIV+T+P +    P
Sbjct: 92  PSVVLNSKKARKFGAGIASITASKESTVAGISDIVITIPTKTPKVP 137


>gi|296109442|ref|YP_003616391.1| sugar isomerase (SIS) [Methanocaldococcus infernus ME]
 gi|295434256|gb|ADG13427.1| sugar isomerase (SIS) [Methanocaldococcus infernus ME]
          Length = 165

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 19/141 (13%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G+G+SG+IG      L      S+F+  A A         R DL+IV+S SG ++
Sbjct: 32  RVFIFGVGRSGYIGRCFHIRLLHLNIDSYFLTDAPA-------FKRGDLLIVISGSGETE 84

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI-VLTLPKEPESCPHGLAPTTSAIMQLA 184
            +  +   A+     +I +  +  ++     DI ++ LP E  S      P  +A  +LA
Sbjct: 85  SVVNVAKKAKEIG-EVIGVVCKCGNL----KDIKLIKLPVEKNS----FLPMGTAFEELA 135

Query: 185 I--GDALAIALLESRNFSEND 203
           +   D +   L+   N  E D
Sbjct: 136 LIFFDLVIAKLMRKLNLREED 156


>gi|168184713|ref|ZP_02619377.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Bf]
 gi|237794977|ref|YP_002862529.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Clostridium botulinum Ba4 str. 657]
 gi|182672231|gb|EDT84192.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Bf]
 gi|229262930|gb|ACQ53963.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Ba4 str. 657]
          Length = 381

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     VE+VM K PK +LE
Sbjct: 271 LLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDK---LVEEVMNKEPKYVLE 327

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DT L   +          L V D   K +G++
Sbjct: 328 DTSLPELLDKFNNLKRGYLPVRDSEGKLLGLI 359


>gi|89900320|ref|YP_522791.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89345057|gb|ABD69260.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 153

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 6/101 (5%)

Query: 242 AITILSEKRFGCVAVVDE--GQKLK-GIITEGDIFRNF-HKDLN--TLSVEDVMIKNPKV 295
           A  ++ E   GC+ VVDE  G+++  G++T+ DI       DL+  TL VEDVM  +   
Sbjct: 27  AARLMRENHVGCLVVVDEVEGKRIVVGLLTDRDIVTAVVASDLDPATLRVEDVMATDLVT 86

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ED  L   M  +R+  +  + VV    + +G+V   D+L
Sbjct: 87  AREDDSLIDLMHTMRRKGVRRIPVVGTQDELLGVVTLDDVL 127


>gi|46203008|ref|ZP_00052236.2| COG0516: IMP dehydrogenase/GMP reductase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 347

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 11/104 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDI--FRNFHKDLNTLSVEDVMIK 291
           L DA  ++   R   + VV+ G      KL GI+T  D+    N  + +  L   D +I 
Sbjct: 83  LADAFEVMKSNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNTGQPVAELMTRDRLIT 142

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +D     A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 143 VREGVTQDE----AKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 182


>gi|332975856|gb|EGK12734.1| CBS domain protein [Desmospora sp. 8437]
          Length = 203

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 8/91 (8%)

Query: 229 SIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           S+P+V +    + DAI  +  +  G + VV EG  L G+I+  D+ ++   ++DL T+ V
Sbjct: 74  SVPVVCQEETSVYDAICTMFLEDVGTLYVVKEGGLLVGVISRKDLLKSSMGNQDLQTIPV 133

Query: 286 EDVMIKNPKVI---LEDTLLTVAMQLLRQHN 313
             +M + P +I   +ED+LL  A +L+  HN
Sbjct: 134 GVIMTRMPNIISCRVEDSLLDAAGKLI--HN 162


>gi|258507089|ref|YP_003169840.1| hypothetical protein LGG_00094 [Lactobacillus rhamnosus GG]
 gi|257147016|emb|CAR85989.1| Putative protein without homology [Lactobacillus rhamnosus GG]
 gi|259648459|dbj|BAI40621.1| transcriptional regulator [Lactobacillus rhamnosus GG]
          Length = 263

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL---TLPKEP 166
            +D+LI+V S  G  +EL   +  A++  +P++ ITS   S +  HAD+ L   +L K  
Sbjct: 162 NQDELIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVAHADVTLIAASLTK-- 219

Query: 167 ESCPHGLAPTTSAIMQL 183
           E     ++P    ++QL
Sbjct: 220 EEALGNISPQIPILIQL 236


>gi|313126873|ref|YP_004037143.1| transcriptional regulator, contains c-terminal cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293238|gb|ADQ67698.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
          Length = 262

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 6/83 (7%)

Query: 259 EGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           EG+K++G +T  D+   N    + T+  ED+++ +P + + D     A +++ +  I  L
Sbjct: 44  EGRKVEGFVTARDLLLENDEAPIFTVMTEDIIVAHPDMAVND-----AARVILRSGIQKL 98

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            VVDD    +GI+   D++R  I
Sbjct: 99  PVVDDAGNLVGIISNTDVIRSQI 121


>gi|218778785|ref|YP_002430103.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760169|gb|ACL02635.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 489

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILED 299
           + + ++S+ R   V V  +G +L GI+T  D+   F  DL+   V  VM K N   + E 
Sbjct: 109 EVLDLMSQYRISGVPVT-QGDQLVGIVTNRDL--RFEIDLDK-KVSSVMTKSNLVTVREG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L  +  +L +H I  L+VVD   K +G++   D+ + 
Sbjct: 165 ITLEESKAMLHKHRIEKLLVVDSSGKLVGLITIKDIEKI 203


>gi|161612658|ref|YP_001586623.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161362022|gb|ABX65790.1| hypothetical protein SPAB_00354 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 282

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATHCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|153938769|ref|YP_001390973.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|168180292|ref|ZP_02614956.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum NCTC 2916]
 gi|152934665|gb|ABS40163.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|182668881|gb|EDT80859.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum NCTC 2916]
 gi|295319032|gb|ADF99409.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. 230613]
          Length = 381

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     VE+VM K PK +LE
Sbjct: 271 LLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDK---LVEEVMNKEPKYVLE 327

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DT L   +          L V D   K +G++
Sbjct: 328 DTSLPELLDKFNNLKRGYLPVRDSEGKLLGLI 359


>gi|1708475|sp|P50097|IMDH_TRIFO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|28373643|pdb|1ME7|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Rvp And Moa Bound
 gi|34810634|pdb|1MEI|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Xmp And Mycophenolic Acid
           Bound
 gi|34810635|pdb|1MEW|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Xmp And Nad Bound
 gi|157829917|pdb|1AK5|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus
 gi|1352865|gb|AAB01581.1| inosine monophosphate dehydrogenase [Tritrichomonas foetus]
          Length = 503

 Score = 38.5 bits (88), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 28/178 (15%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SAIMQ   G+ +AIAL      S        E+   ++H        FV        
Sbjct: 53  PLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVV------- 105

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNFHKDLNTL 283
             S   VK      D + I        VAV D+G     L G++T+    R++  DL   
Sbjct: 106 --SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQ----RDYPIDLTQT 159

Query: 284 S--VEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M    K++   +DT L+ A +++ +  ++ L ++DD Q    IV   D  R
Sbjct: 160 ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDR 217


>gi|300782702|ref|YP_003762993.1| IMP dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792216|gb|ADJ42591.1| IMP dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 503

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 42/89 (47%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQL 308
           R   V V D    L GIIT  D+   F  D ++  V +VM K P V  +       A+ L
Sbjct: 127 RISGVPVTDAAGTLVGIITNRDM--RFEVD-HSRPVSEVMTKAPLVTAQVGVSADAALGL 183

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 184 LRRHKIEKLPIVDGAGKLRGLITVKDFVK 212


>gi|283850871|ref|ZP_06368157.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
 gi|283573794|gb|EFC21768.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
          Length = 830

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 55/100 (55%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE 298
           +A+  ++++   C+ V  + +   GIITE D+ R   +   L  L + D+M   P V +E
Sbjct: 155 EAVRRMADRSISCLIVARDARP-AGIITERDVVRLLAESPHLGRLKLYDIM-SCPVVCVE 212

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D  +  A  ++++  +  L+VVDD ++ +G+V   D++R
Sbjct: 213 ADRPVFEAAMVMKKRRMRRLVVVDDDRRVLGVVTQSDIVR 252



 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 5/103 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKVIL 297
           + + ++  +   C+ V + G  + GIITE +I +   H+  D     V D+M      + 
Sbjct: 25  EGLDVMRRRSISCLIVAEAGLPV-GIITERNILWAAAHRGEDFADRPVADLMSAPVVTVA 83

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFG 339
           EDT+L  A  LL +  +  L++VD   +A G++   DL+ R G
Sbjct: 84  EDTMLVEAYHLLAKKRLRHLVMVDAAGQARGVLTQSDLIERLG 126


>gi|253577332|ref|ZP_04854649.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843232|gb|EES71263.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 486

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++++ R   V +V+E QKL GI+T  D+   F  D N + + DVM ++  +     
Sbjct: 110 DAEQVMAKFRISGVPIVNEEQKLVGILTNRDL--RFVHDYN-IKISDVMTRDNLITAPVG 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 167 TSLHEAEIILQKHKIEKLPLVDEQNILKGLITIKDI 202


>gi|238753919|ref|ZP_04615279.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           ruckeri ATCC 29473]
 gi|238707907|gb|EEQ00265.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           ruckeri ATCC 29473]
          Length = 280

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 89/186 (47%), Gaps = 16/186 (8%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++AEK   ++L ++L      +   A+  +K  + RV++ GIG SG +   L+  L   G
Sbjct: 100 LLAEKN--AALRATLDINSEQRLEQALNMLKNAR-RVILLGIGASGLVAKDLSYKLLKIG 156

Query: 91  TPSFFVHAAEAS-HGDLGMITR---DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                +  +EA  H  L  +      DL++ +S+SG   E+      AR     ++A+TS
Sbjct: 157 ----IMAVSEADMHVQLAAVQAMGPQDLLLAISFSGERREVNLAAEEARTAGAKVLALTS 212

Query: 147 ENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + + +   AD  L T+ +EP      ++ +T+   Q A+ D L +A+++ ++F     +
Sbjct: 213 FSPNGLQQRADHCLYTIAEEPAIRSAAISSSTA---QFALTDLLFMAIIQ-QDFDHAQDH 268

Query: 206 VLHPGG 211
           + H   
Sbjct: 269 IRHSAN 274


>gi|225456355|ref|XP_002283958.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 546

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM +NP  
Sbjct: 74  IYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIF 133

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 134 VLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 171


>gi|152982734|ref|YP_001353342.1| inosine-5'-monophosphate dehydrogenase [Janthinobacterium sp.
           Marseille]
 gi|151282811|gb|ABR91221.1| inosine-5'-monophosphate dehydrogenase [Janthinobacterium sp.
           Marseille]
          Length = 139

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIKNPKVILE 298
           DA   + E  FG + V  E  ++ G I++ DI  R   +   ++  V DVM K      E
Sbjct: 23  DAAKKMKEGNFGMLPV-HENDRMIGSISDRDIVIRAVAEGKPSSTKVRDVMTKGIVWAFE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D+ L+  ++L+ QH +  L +V+  ++ +GIV   D+
Sbjct: 82  DSSLSEGVRLMSQHQVRRLPIVNSQKRLVGIVAIGDV 118


>gi|254226341|ref|ZP_04919931.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621146|gb|EAZ49490.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 282

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|289192110|ref|YP_003458051.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 154

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/132 (28%), Positives = 55/132 (41%), Gaps = 34/132 (25%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL------------ 283
           LID I +  E +     V+++  KL GII+E DI +     ++DLN +            
Sbjct: 19  LIDVIKLFRENKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPLDLIELPL 78

Query: 284 -------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                               V DVM +   V   D  +  A +L+ ++NI  L VVDD  
Sbjct: 79  RTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVENNIKRLPVVDDEG 138

Query: 325 KAIGIVHFLDLL 336
             IGIV   DL+
Sbjct: 139 NLIGIVTRGDLI 150


>gi|209524871|ref|ZP_03273417.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
 gi|209494750|gb|EDZ95059.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
          Length = 1380

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 27/131 (20%)

Query: 233 VKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSV 285
           V++ C + D I+I   +        CV V+ +   + GI+T+ DI       ++L  L +
Sbjct: 32  VRLQCQMTDNISISESEPDLYSHLTCVIVL-QDLMVVGILTQRDIVGLAAQQQNLEELLI 90

Query: 286 EDVMIKNPKVI------LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV--------- 330
           ++VM   P VI      L D+L T+   LL++H I  L +VDD  + +G+V         
Sbjct: 91  QEVM--TPSVITVRESELTDSLTTI--NLLQKHRIRHLPIVDDSDRLVGLVTHESLRKLM 146

Query: 331 HFLDLLRFGII 341
             +DLLR  ++
Sbjct: 147 RPIDLLRLRLV 157


>gi|167631117|ref|YP_001681616.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
 gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
          Length = 142

 Score = 38.1 bits (87), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKV 295
           +I+A  I+     G V VV EGQK  GIIT+ DI  R   K  D    +++  M K+P  
Sbjct: 21  IIEAAKIMMRLNVGAVPVV-EGQKCVGIITDRDIVLRVVAKGMDPRGTTIQSAMTKDPIT 79

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D  +  A  L+    I  L ++++  + +GIV   DL
Sbjct: 80  GTPDMDIHAAADLMSDRQIRRLPIIEN-DRLVGIVSLGDL 118


>gi|319655037|ref|ZP_08009107.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317393261|gb|EFV74029.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 487

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 52/198 (26%), Positives = 89/198 (44%), Gaps = 22/198 (11%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL +P + E  P  ++   +   ++A+   +  A +++   +E    +   GG LG +
Sbjct: 14  DDVLLVPSKSEVLPRDVSLKVNLTEKIALNIPVISAGMDTVTEAEMAIAMARQGG-LGVI 72

Query: 217 FVCASDVMHSGDSIPLVK------IGCP--------LIDAITILSEKRFGCVAVVD--EG 260
               S +    D +  VK      I  P        + DA  ++ + R   V +V+  E 
Sbjct: 73  HKNMS-IEQQADQVDKVKRSESGVITDPFFLTPEQQVFDAEHLMGKYRISGVPIVNNNEE 131

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMV 319
           QKL GI+T  D+   F +D  ++ + DVM K   V     T L  A ++L+QH I  L +
Sbjct: 132 QKLVGILTNRDL--RFIQDY-SIKISDVMTKENLVTAPVGTTLDEAEKILQQHKIEKLPL 188

Query: 320 VDDCQKAIGIVHFLDLLR 337
           VDD     G++   D+ +
Sbjct: 189 VDDEGVLKGLITIKDIEK 206


>gi|307294659|ref|ZP_07574501.1| inosine-5'-monophosphate dehydrogenase [Sphingobium
           chlorophenolicum L-1]
 gi|306879133|gb|EFN10351.1| inosine-5'-monophosphate dehydrogenase [Sphingobium
           chlorophenolicum L-1]
          Length = 485

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNP 293
           G  L DA  +++  +   + VV+   KL GI+T  D+    N  + ++ L   D    N 
Sbjct: 101 GATLADAQMLMARHKISGIPVVEASGKLVGIVTNRDVRFAENPAQPVSELMTHD----NL 156

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +        AM+LL Q  I  L+VVDD    +G++   D+
Sbjct: 157 ATVKTGVGQEEAMRLLHQRRIEKLLVVDDHYHCVGLITVKDI 198


>gi|296134218|ref|YP_003641465.1| Inorganic diphosphatase [Thermincola sp. JR]
 gi|296032796|gb|ADG83564.1| Inorganic diphosphatase [Thermincola potens JR]
          Length = 545

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 20/78 (25%), Positives = 39/78 (50%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D++ +     L  L+  A D+++      +V+   P+ +A  ++  ++   + VVDEG  
Sbjct: 52  DYFKVEVPRLLPDLYTRARDLVNGNGGCTVVRPDIPVWEAWKLMRARKIKTLPVVDEGNH 111

Query: 263 LKGIITEGDIFRNFHKDL 280
           L G++T GD    +  DL
Sbjct: 112 LLGLVTVGDFADKYLADL 129


>gi|288931844|ref|YP_003435904.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288894092|gb|ADC65629.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 693

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKN 292
           KIG    DAI ++ +   G + VVDE  KL  + +E D F+      +  S + D   KN
Sbjct: 591 KIG----DAIRLMIQNDIGFLPVVDEAGKLVAVFSERDAFKAIANGASLDSPLIDYATKN 646

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           P+ +  D  ++   +++ + NI  ++ VD   + + +    D+L  G
Sbjct: 647 PQTVSCDDPVSKVAEIMVRLNIRHIVGVDSAGRPVCVAGVKDILAVG 693


>gi|254780889|ref|YP_003065302.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040566|gb|ACT57362.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 493

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 75/174 (43%), Gaps = 25/174 (14%)

Query: 175 PTTSAIMQLAIGDALAIALLES-------RNFSENDFYV-LHPGGKLGTLFVCASDVMHS 226
           P  SA M       LAIA+ ++       RNFS ++    +H   K             S
Sbjct: 48  PIMSAAMDQVTDSRLAIAMAQAGGLGVIHRNFSPSEQVAQVHQVKKF-----------ES 96

Query: 227 GDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTL 283
           G  +  V I     L DA+ ++ +     + VV+    KL GI+T  D+   F  +    
Sbjct: 97  GMVVNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDV--RFASNAQQ- 153

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V ++M +N   + +   L  A  LL QH I  L+VVDD    IG++   D+ R
Sbjct: 154 AVGELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIER 207


>gi|153001189|ref|YP_001366870.1| signal-transduction protein [Shewanella baltica OS185]
 gi|304411956|ref|ZP_07393567.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS183]
 gi|307303276|ref|ZP_07583031.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica BA175]
 gi|151365807|gb|ABS08807.1| putative signal-transduction protein with CBS domains [Shewanella
           baltica OS185]
 gi|304349816|gb|EFM14223.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS183]
 gi|306913636|gb|EFN44058.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica BA175]
          Length = 615

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILED 299
           A  ++   R   + V D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDQ-DKAIGMVTSTDILR 267


>gi|117621246|ref|YP_856489.1| HPP family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562653|gb|ABK39601.1| HPP family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 375

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           Q L+ ++ E  +       + T+ V++VM ++  +I        A QLL  H +  L VV
Sbjct: 211 QDLQALLQEAQL-HALRARVGTVRVQEVMSRDLILIEAQQPAMAAWQLLSHHQVKALPVV 269

Query: 321 DDCQKAIGIVHFLDLL 336
           D+  + IGI+   DL+
Sbjct: 270 DEAGRLIGIITLHDLM 285


>gi|240102360|ref|YP_002958668.1| hypothetical protein TGAM_0302 [Thermococcus gammatolerans EJ3]
 gi|239909913|gb|ACS32804.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 186

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 17/103 (16%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDL----------------NTLSVEDVMIKNPKV 295
             V V DEG KL G IT  D+ R F                    N   VED+M++ P  
Sbjct: 79  SAVVVDDEG-KLLGFITMKDLLRFFEPPRRYSIVGINLLKKYSISNASRVEDIMVRKPIT 137

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           I  D  L  A++++ +     L VVDD  +  GI+   D++R 
Sbjct: 138 IHVDENLGRAIRIMLETGKHHLPVVDDKNRVHGILEVKDIIRL 180


>gi|218698106|ref|YP_002405773.1| putative Transcriptional regulator [Escherichia coli 55989]
 gi|237703963|ref|ZP_04534444.1| transcriptional regulator [Escherichia sp. 3_2_53FAA]
 gi|218354838|emb|CAV01973.1| putative Transcriptional regulator [Escherichia coli 55989]
 gi|226901875|gb|EEH88134.1| transcriptional regulator [Escherichia sp. 3_2_53FAA]
 gi|281181384|dbj|BAI57714.1| transcriptional regulator [Escherichia coli SE15]
 gi|315289190|gb|EFU48588.1| SIS domain protein [Escherichia coli MS 110-3]
 gi|323955430|gb|EGB51196.1| SIS domain-containing protein [Escherichia coli H263]
          Length = 274

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALL 194
             L + LL
Sbjct: 240 VMLLVELL 247


>gi|188532627|ref|YP_001906424.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
 gi|188027669|emb|CAO95519.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
          Length = 297

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 9/108 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHA-----AEASHGDLGMITRDDLIIVLSW 120
           +V I GIG SG +    A      GTP+  ++      AE     L  + R D++I++  
Sbjct: 144 QVAIFGIGASGILAEYTARLFTRIGTPASVLNRTGILLAE----QLLNMQRGDVLIMMGQ 199

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
             +  E    L  ARR  IP+I +T+   S  +  A  V+ +P+  E+
Sbjct: 200 KSAHREGLTTLGEARRLGIPVILLTNAPDSRFSREAHTVIGVPRGGEN 247


>gi|282882142|ref|ZP_06290783.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus lacrimalis
           315-B]
 gi|281298172|gb|EFA90627.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus lacrimalis
           315-B]
          Length = 483

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           DA  ++   +   V ++D+  +L+GIIT  DI     N  K    ++ E+++   P + L
Sbjct: 107 DASELMERYKISGVPIIDDKGRLEGIITNRDIRFETDNKRKIKEVMTSENLITGTPGISL 166

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E+     A+++L+ H I  L +VD      G++   D+
Sbjct: 167 EE-----ALKILKGHKIEKLPLVDKNNILKGLITIKDI 199


>gi|315127474|ref|YP_004069477.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp.
           SM9913]
 gi|315015988|gb|ADT69326.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp.
           SM9913]
          Length = 489

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + DA+ +  EK F    V D    L GI+T  D+   F   L    V  VM K   ++  
Sbjct: 106 IADAVELSQEKGFSGFPVTDSENNLVGIVTSRDM--RFETKLEQ-PVSTVMTKKENLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E T     + L+ +H I  ++VVDD  K  G++   D  +
Sbjct: 163 KEGTAREDILSLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203


>gi|297734436|emb|CBI15683.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM +NP  
Sbjct: 69  IYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPIF 128

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 129 VLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166


>gi|16081428|ref|NP_393769.1| hypothetical protein Ta0289 [Thermoplasma acidophilum DSM 1728]
 gi|10639432|emb|CAC11434.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 178

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +F+    +M+S  +   V     + DA+ I++E     + V D+     G+++E  I + 
Sbjct: 1   MFMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKR 58

Query: 276 F---HKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           F   +K  + + +  VM K  PKV  +  +  VA   L ++ +    VVDD  + +GIV 
Sbjct: 59  FIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVA-AYLSENGLERCAVVDDSGRVVGIVT 117

Query: 332 FLDLLRF 338
             DL R+
Sbjct: 118 LTDLSRY 124


>gi|326905255|gb|EGE52188.1| LOW QUALITY PROTEIN: inosine-5-monophosphate dehydrogenase guaB2
           [Mycobacterium tuberculosis W-148]
          Length = 525

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 153 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 210 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|256546045|ref|ZP_05473399.1| RpiR family phosphosugar-binding transcriptional regulator
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398339|gb|EEU11962.1| RpiR family phosphosugar-binding transcriptional regulator
           [Anaerococcus vaginalis ATCC 51170]
          Length = 297

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 55/117 (47%), Gaps = 8/117 (6%)

Query: 94  FFVHAAEASHGDLGMITR---DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           + V+    SH  L   T+   +D I V S SG + E+  +   A++    +IA+T   KS
Sbjct: 173 YMVNYISDSHMQLSACTKMDQNDCIFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKS 232

Query: 151 VVACHADIVLTLPK-EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
            +   +D  + LP  E E   HG     + I+ L + D L I+L+   N  EN  Y+
Sbjct: 233 EMVKISDEAMILPSIESE---HGTESLNARILYLTVMDILLISLMYD-NVEENKKYM 285


>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
 gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
          Length = 143

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 5/106 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+IDA+ I++E + G + V+ +  KL GII+E D  R      K      +E+VM KN  
Sbjct: 24  PVIDALIIMAEYKIGALLVM-QKNKLLGIISERDYAREIVLKGKSSKECLIEEVMTKNVI 82

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            I  +      ++++ +++I  L V+++  K +G++   DL +  I
Sbjct: 83  TIDANDTYDKGLEIMTENHIRHLPVIEN-NKVVGMLSLGDLAKETI 127


>gi|163750610|ref|ZP_02157847.1| hemolysin protein, putative [Shewanella benthica KT99]
 gi|161329605|gb|EDQ00596.1| hemolysin protein, putative [Shewanella benthica KT99]
          Length = 427

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 3/63 (4%)

Query: 279 DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL  ++VED+MI   ++    + D   ++  Q+++  +  VL+  D+   A+G VH  D 
Sbjct: 197 DLEKVTVEDIMIPRSELFAININDDFKSITKQMIQSPHTRVLLFRDNIDDAVGFVHLRDA 256

Query: 336 LRF 338
           LR 
Sbjct: 257 LRL 259


>gi|153939138|ref|YP_001392006.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. Langeland]
 gi|168180866|ref|ZP_02615530.1| nucleoside-diphosphate-sugar pyrophosphorylase [Clostridium
           botulinum NCTC 2916]
 gi|152935034|gb|ABS40532.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. Langeland]
 gi|182668224|gb|EDT80203.1| nucleoside-diphosphate-sugar pyrophosphorylase [Clostridium
           botulinum NCTC 2916]
 gi|295320021|gb|ADG00399.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. 230613]
          Length = 358

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 53/96 (55%), Gaps = 1/96 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDT 300
           ++ +L +   G + VVDE +KL G +T+GDI R   + ++    +E++M  NP  + + T
Sbjct: 19  SLKLLDKGAKGIILVVDEERKLIGTVTDGDIRRAILEGISLDKKIEEIMHINPIKVKQGT 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     LL ++ I  + +VD+  + + ++   D+L
Sbjct: 79  PIEEIKDLLIKNAIREIPIVDEYDRVVDMITVNDIL 114


>gi|18312750|ref|NP_559417.1| bifunctional phosphoglucose/phosphomannose isomerase [Pyrobaculum
           aerophilum str. IM2]
 gi|74564232|sp|Q8ZWV0|PGMI_PYRAE RecName: Full=Bifunctional phosphoglucose/phosphomannose isomerase;
           AltName: Full=Glucose-6-phosphate isomerase; Short=GPI;
           AltName: Full=Mannose-6-phosphate isomerase; AltName:
           Full=Phosphoglucose isomerase; Short=PGI; AltName:
           Full=Phosphomannose isomerase; Short=PMI
 gi|51247785|pdb|1TZB|A Chain A, Crystal Structure Of Native PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum
 gi|51247786|pdb|1TZB|B Chain B, Crystal Structure Of Native PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum
 gi|51247787|pdb|1TZC|A Chain A, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum In Complex With 5-
           Phosphoarabinonate
 gi|51247788|pdb|1TZC|B Chain B, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum In Complex With 5-
           Phosphoarabinonate
 gi|58177277|pdb|1X9H|A Chain A, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum In Complex With
           Fructose 6-Phosphate
 gi|58177278|pdb|1X9H|B Chain B, Crystal Structure Of PhosphoglucosePHOSPHOMANNOSE
           Isomerase From Pyrobaculum Aerophilum In Complex With
           Fructose 6-Phosphate
 gi|58177279|pdb|1X9I|A Chain A, Crystal Structure Of Crystal Structure Of
           PhosphoglucosePHOSPHOMANNOSE
           PhosphoglucosePHOSPHOMANNOSEISOMERASE FROM PYROBACULUM
           Aerophilum In Complex With Glucose 6-Phosphate
 gi|58177280|pdb|1X9I|B Chain B, Crystal Structure Of Crystal Structure Of
           PhosphoglucosePHOSPHOMANNOSE
           PhosphoglucosePHOSPHOMANNOSEISOMERASE FROM PYROBACULUM
           Aerophilum In Complex With Glucose 6-Phosphate
 gi|18160231|gb|AAL63599.1| glucose-6-phosphate isomerase, conjectural [Pyrobaculum aerophilum
           str. IM2]
          Length = 302

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 6/97 (6%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S+     V +I+A+  R+ I+G+G SG + + L    + T      V A +    D  + 
Sbjct: 24  SYVVEGEVVRIEAMP-RLYISGMGGSG-VVADLIRDFSLTWNWEVEVIAVK----DYFLK 77

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            RD L+I +S+SG++ E    + YA+R  IP +AIT+
Sbjct: 78  ARDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITT 114


>gi|315659082|ref|ZP_07911948.1| 6-phospho 3-hexuloisomerase [Staphylococcus lugdunensis M23590]
 gi|315495893|gb|EFU84222.1| 6-phospho 3-hexuloisomerase [Staphylococcus lugdunensis M23590]
          Length = 189

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G+SG I +  A  L   G  ++ V  +         I   DL ++LS SGS+  
Sbjct: 46  IFTAGKGRSGFIANTFAMRLNQLGKDAYVVGESTTPS-----IKEHDLFVILSGSGSTAH 100

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQLAI 185
           L+ +   A+     ++ +T+   S +   A+ V+ LP   +    G   P  S   Q A+
Sbjct: 101 LRLLAEKAQTVGAKVVLLTTNPDSPIGELAETVIELPAGTKYNAEGSEQPLGSLFEQAAL 160

Query: 186 --GDALAIALLESRNFSE 201
              D++ + L+++ N  E
Sbjct: 161 LFLDSVVLGLMDTFNIDE 178


>gi|310764808|gb|ADP09758.1| N-acetylmuramic acid-6-phosphate etherase [Erwinia sp. Ejp617]
          Length = 301

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGD--LGM- 108
           GR++  G G SG +G   AS    T             G P+  V + E +  D  LG+ 
Sbjct: 63  GRLIYIGAGTSGRLGVLDASECPPTFGVANGVVIGLIAGGPAALVTSIEGAEDDEQLGVS 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I  +D+++ L+ SG +  + A L YAR+       I+    S +A  A+I ++ 
Sbjct: 123 DLQALKINANDMVVGLAASGRTPYVTAALRYARQLGCRTAGISCNPHSPLALAAEIAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 LVGPEA 188


>gi|54294956|ref|YP_127371.1| hypothetical protein lpl2035 [Legionella pneumophila str. Lens]
 gi|53754788|emb|CAH16275.1| hypothetical protein lpl2035 [Legionella pneumophila str. Lens]
          Length = 148

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVE 286
           + +++   PLI+A  +L  +    V + D+   + GI+T  DI R          T+ VE
Sbjct: 15  LAIIRDNAPLIEAAKLLDGRHINLVVICDKSGAMVGIVTRTDIVRMMAVCQGCGCTVPVE 74

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VM K         LL     +++++N+  + +VD+  K +G+++  D L
Sbjct: 75  TVMTKEVTSCRPSDLLRDVWTIMKENNLLHVPIVDENFKPLGVINARDAL 124


>gi|15610547|ref|NP_217928.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Rv]
 gi|15843006|ref|NP_338043.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CDC1551]
 gi|31794592|ref|NP_857085.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium bovis
           AF2122/97]
 gi|121639336|ref|YP_979560.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663275|ref|YP_001284798.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148824618|ref|YP_001289372.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           F11]
 gi|167968703|ref|ZP_02550980.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|215428913|ref|ZP_03426832.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T92]
 gi|215432378|ref|ZP_03430297.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|218755192|ref|ZP_03533988.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           GM 1503]
 gi|224991832|ref|YP_002646521.1| inosine-5-monophosphate dehydrogenase [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253800458|ref|YP_003033459.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|254366022|ref|ZP_04982067.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552516|ref|ZP_05142963.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188466|ref|ZP_05765940.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202511|ref|ZP_05770002.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|260206777|ref|ZP_05774268.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           K85]
 gi|289444932|ref|ZP_06434676.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|289449110|ref|ZP_06438854.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289555687|ref|ZP_06444897.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289576144|ref|ZP_06456371.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis K85]
 gi|289752130|ref|ZP_06511508.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis T92]
 gi|289755541|ref|ZP_06514919.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|289763594|ref|ZP_06522972.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|297636073|ref|ZP_06953853.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN 4207]
 gi|297733073|ref|ZP_06962191.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN R506]
 gi|313660404|ref|ZP_07817284.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN V2475]
 gi|54037423|sp|P65168|IMDH_MYCBO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|54041389|sp|P65167|IMDH_MYCTU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1449376|emb|CAB01012.1| PROBABLE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE GUAB2 (IMP
           DEHYDROGENASE) (INOSINIC ACID DEHYDROGENASE) (INOSINATE
           DEHYDROGENASE) (IMP OXIDOREDUCTASE)
           (INOSINE-5'-MONOPHOSPHATE OXIDOREDUCTASE) (IMPDH) (IMPD)
           [Mycobacterium tuberculosis H37Rv]
 gi|13883347|gb|AAK47857.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CDC1551]
 gi|31620189|emb|CAD95632.1| PROBABLE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE GUAB2 (IMP
           DEHYDROGENASE) (INOSINIC ACID DEHYDROGENASE) (INOSINATE
           DEHYDROGENASE) (IMP OXIDOREDUCTASE)
           (INOSINE-5'-MONOPHOSPHATE OXIDOREDUCTASE) (IMPDH) (IMPD)
           [Mycobacterium bovis AF2122/97]
 gi|121494984|emb|CAL73470.1| Probable inosine-5'-monophosphate dehydrogenase guaB2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|134151535|gb|EBA43580.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507427|gb|ABQ75236.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148723145|gb|ABR07770.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis F11]
 gi|224774947|dbj|BAH27753.1| inosine-5-monophosphate dehydrogenase [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253321961|gb|ACT26564.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289417851|gb|EFD15091.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|289422068|gb|EFD19269.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289440319|gb|EFD22812.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289540575|gb|EFD45153.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis K85]
 gi|289692717|gb|EFD60146.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis T92]
 gi|289696128|gb|EFD63557.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|289711100|gb|EFD75116.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|328460190|gb|AEB05613.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 529

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 153 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 210 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|28373644|pdb|1ME8|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Rvp Bound
 gi|34810632|pdb|1ME9|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Imp Bound
 gi|34810633|pdb|1MEH|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Imp And Moa Bound
          Length = 503

 Score = 38.1 bits (87), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 73/178 (41%), Gaps = 28/178 (15%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SAIMQ   G+ +AIAL      S        E+   ++H        FV        
Sbjct: 53  PLVSAIMQSVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKNFKAGFVV------- 105

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNFHKDLNTL 283
             S   VK      D + I        VAV D+G     L G++T+    R++  DL   
Sbjct: 106 --SDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGVLLGLVTQ----RDYPIDLTQT 159

Query: 284 S--VEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M    K++   +DT L+ A +++ +  ++ L ++DD Q    IV   D  R
Sbjct: 160 ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIVFRKDYDR 217


>gi|315425878|dbj|BAJ47531.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315427736|dbj|BAJ49332.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 128

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 56/103 (54%), Gaps = 4/103 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPK 294
             L D + I++E+  G + V++ G ++ G+++E D+ R     +D   + V ++  ++  
Sbjct: 18  ATLYDVVRIMAEQNIGFIVVLENG-RMVGVLSERDVVRTLAERRDFG-VKVGEICKRDII 75

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  D  +  A + + +H I  ++VVD+  K +G+V   D+L+
Sbjct: 76  TLPADASVEDAAEEMGRHRIRHIVVVDNAGKLVGVVSARDVLQ 118


>gi|309791677|ref|ZP_07686169.1| inosine-5'-monophosphate dehydrogenase [Oscillochloris trichoides
           DG6]
 gi|308226299|gb|EFO80035.1| inosine-5'-monophosphate dehydrogenase [Oscillochloris trichoides
           DG6]
          Length = 490

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ +++E R   V +      L GI+T  D+   F  D +    E +  KN   + E T
Sbjct: 113 DALDLMAEYRISGVPICTGDNDLVGILTNRDL--RFETDRSRPISELMTSKNLVTVPEGT 170

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A  +L +H I  ++VV+   K  G++   D+++
Sbjct: 171 TLEQAKAVLNRHRIEKVLVVNSRGKLSGMITVKDIMK 207


>gi|304315128|ref|YP_003850275.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588587|gb|ADL58962.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 281

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 242 AITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           A+ ++ ++    + VV +G ++L GIIT  D+  N  ++   L    +M +NP  +  D 
Sbjct: 23  ALELMRKENVSGLPVVKKGTEELVGIITRSDLVENPDEEQIAL----IMTRNPVTVAPDD 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + VA + + + NI  + VVD   + +GIV   DL+
Sbjct: 79  DVRVAAERMLERNIRRVPVVDQ-DRLVGIVTSYDLV 113


>gi|218692545|ref|YP_002400757.1| putative Transcriptional regulator [Escherichia coli ED1a]
 gi|218430109|emb|CAR11105.2| putative Transcriptional regulator [Escherichia coli ED1a]
          Length = 274

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 7/128 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  AR+  + ++A+++  +S +A  +DI L   K     P G  P ++  +   +G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAK-----PEG--PLSAGALNAKVG 239

Query: 187 DALAIALL 194
             L + LL
Sbjct: 240 VMLLVELL 247


>gi|215405448|ref|ZP_03417629.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|215413318|ref|ZP_03422003.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215447740|ref|ZP_03434492.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|289747240|ref|ZP_06506618.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|289759571|ref|ZP_06518949.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|294995815|ref|ZP_06801506.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           210]
 gi|298526894|ref|ZP_07014303.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
 gi|289687768|gb|EFD55256.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|289715135|gb|EFD79147.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|298496688|gb|EFI31982.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
          Length = 529

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 153 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 210 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|254248274|ref|ZP_04941594.1| hypothetical protein BCPG_03101 [Burkholderia cenocepacia PC184]
 gi|124874775|gb|EAY64765.1| hypothetical protein BCPG_03101 [Burkholderia cenocepacia PC184]
          Length = 425

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 1/75 (1%)

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           L+ ++ E ++ + + +    L   D+M K+   +   T +  A+ LL +H +  L VVDD
Sbjct: 261 LETLLRETEM-QAYTRTFGQLKCADLMTKHAIEVAPSTSVAAALTLLDRHRVKALPVVDD 319

Query: 323 CQKAIGIVHFLDLLR 337
             + IGIV   DL R
Sbjct: 320 EGRLIGIVTRADLTR 334


>gi|67926212|ref|ZP_00519431.1| CBS [Crocosphaera watsonii WH 8501]
 gi|67851945|gb|EAM47485.1| CBS [Crocosphaera watsonii WH 8501]
          Length = 123

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/37 (45%), Positives = 25/37 (67%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            PL +A+ I++EKR   + VVDE  KL G+I+E D+ 
Sbjct: 20  TPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLM 56


>gi|328957277|ref|YP_004374663.1| glycine betaine/carnitine/choline transport ATP-binding protein
           OpuCA [Carnobacterium sp. 17-4]
 gi|328673601|gb|AEB29647.1| glycine betaine/carnitine/choline transport ATP-binding protein
           OpuCA [Carnobacterium sp. 17-4]
          Length = 397

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 3/95 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  + +AI ++ +KR   + V D+   LKG +    I RN  +     SV D+MI     
Sbjct: 268 GKSISEAIRLMRDKRVDSLFVTDDSGVLKGYVDIEKIDRNRKR---ATSVGDIMIDKVYF 324

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + E TLL   +Q + +     + VVD+  + IG+V
Sbjct: 325 VREGTLLRDTVQRILKRGFKNIPVVDNKGRLIGLV 359


>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 550

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKV 295
           + +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  
Sbjct: 78  VYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLF 137

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DTL   A+Q + Q     L VVD+ +    ++  LD+ +
Sbjct: 138 VLGDTLAVEALQKMVQGKFRHLPVVDNGE----VIALLDIAK 175


>gi|308373735|ref|ZP_07433498.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308377342|ref|ZP_07441900.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308406150|ref|ZP_07495301.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|308336524|gb|EFP25375.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308348210|gb|EFP37061.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308364355|gb|EFP53206.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|323717898|gb|EGB27087.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CDC1551A]
          Length = 525

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 149 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 205

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 206 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 234


>gi|71907957|ref|YP_285544.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica
           RCB]
 gi|71847578|gb|AAZ47074.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica
           RCB]
          Length = 487

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 52/99 (52%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           D I I  + +   + V+D+  K+ GI+T  D+   F  +L+   V+ +M    +++   E
Sbjct: 107 DVIEITRQYKISGLPVIDKSGKVVGIVTNRDM--RFETNLDQ-PVKAIMTPRKRLVTVKE 163

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +  A +L+R+H +  ++V+DD     G++   D+L+
Sbjct: 164 GASVEDAKELIRRHRLERVLVIDDEWHMRGLITVKDILK 202


>gi|15669812|ref|NP_248626.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2497361|sp|Q59011|IMDH_METJA RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1592337|gb|AAB99638.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 496

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +AI ++       + VVD   KL GIIT  D+     K   T  V+DVM K+     ED 
Sbjct: 111 EAINVMETYSISGLPVVDNEDKLVGIITHRDVKAIEDK---TKKVKDVMTKDVVCAKEDV 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               A++L+  + +  L +VDD  + IGI+   D+L+
Sbjct: 168 EEEEALELMYANRVERLPIVDDENRLIGIITLRDILK 204


>gi|297797347|ref|XP_002866558.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312393|gb|EFH42817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 544

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKNPKV 295
           + +A   ++ +R   + + D  + L GI+T+ DI  R   +++N     V  VM KNP  
Sbjct: 73  IYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQEVNVEETPVSKVMTKNPMF 132

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L +TL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 VLSETLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 170


>gi|317051163|ref|YP_004112279.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum
           S5]
 gi|316946247|gb|ADU65723.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum
           S5]
          Length = 489

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 2/95 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++S+ +   V V  EG +L GI+T  D+   F KD      E +  KN   +    
Sbjct: 109 DAEELMSKYKISGVPVTVEGNRLVGILTNRDL--RFCKDYTRKVSEYMTSKNLVTVSMGI 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A  +L +H I  L+VVD+     G++   D+
Sbjct: 167 SLEAAADILHEHRIEKLLVVDNDNTLKGLITTKDI 201


>gi|284162241|ref|YP_003400864.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012238|gb|ADB58191.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 689

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 11/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-- 290
           +K    L +AI +++E   G + +V+ G KL  + +E D  R      N  S+ED ++  
Sbjct: 584 IKSNATLAEAIRVMAENNIGILPIVNNG-KLVAVFSERDAVRAIA---NGASLEDNVMNY 639

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNIS-VLMVVDDCQKAIGIVHFLDLLR 337
             KNPKV+     + VA++L+   N+  V+ V +D  + +  V   D+L+
Sbjct: 640 ATKNPKVVRSSDPVKVAIELMLNLNVRHVIGVENDRPRCVASVR--DILQ 687


>gi|227485807|ref|ZP_03916123.1| IMP dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236185|gb|EEI86200.1| IMP dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 483

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ I++  R   V +VD+   LKGI+T  D+   F  D + L ++D+M K+  ++ +
Sbjct: 105 LGDALDIMAHYRISGVPIVDDDMCLKGILTNRDV--RFQDDESVL-IDDIMTKDNLILGK 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + +  A++ +    +  L +V+D  K  G++   D+ +
Sbjct: 162 EGISMEDAIKKMESGKVEKLPIVNDEGKLKGLITIKDIEK 201


>gi|220918301|ref|YP_002493605.1| signal transduction protein with CBS domains [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956155|gb|ACL66539.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 139

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+ +A  ++SE++ G VAV D G ++ G++TE D+         D N    E +    P
Sbjct: 19  APIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGADANHPMREAMRQGLP 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V    T + VA  L+R H    L+V +  Q  +G+V   D+++ 
Sbjct: 78  RVSSSATEVEVA-GLMRDHTTRHLLVEEGGQ-VVGVVSMRDIIQL 120


>gi|45357696|ref|NP_987253.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           S2]
 gi|45047256|emb|CAF29689.1| IMP dehydrogenase [Methanococcus maripaludis S2]
          Length = 500

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ++DA  I+ E     + VV E + L GI+T  D+   F  D N ++VE VM K    + E
Sbjct: 113 VLDAERIMYEYNVSGLPVVSENKTLVGILTTRDL--KFVPDKN-VAVETVMTKEVLHVHE 169

Query: 299 DTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
           DT     +  L ++ I  L ++D + ++ +G+V   D+L+
Sbjct: 170 DTPYEEILNRLYENKIERLPILDKNTKELLGMVTLRDILK 209


>gi|14600551|ref|NP_147068.1| hypothetical protein APE_0234 [Aeropyrum pernix K1]
 gi|5103626|dbj|BAA79147.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 278

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 12/130 (9%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ASD M     +  V  G  L     I+ E+R+  V VVD+   ++GI+T+ D+ R  + 
Sbjct: 141 TASDAMTR--DVEYVLEGDSLTRVWEIMVERRYAGVPVVDQRMVVRGIVTQYDLIRKGYT 198

Query: 279 DL--------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIG 328
            L        + + VE VM ++   + E   L    +++    +  + VV   D +   G
Sbjct: 199 RLGLESEAPPHRVRVESVMTRSVIYVAESDNLEDVARIMLDRGVGRVPVVKSRDSRVLTG 258

Query: 329 IVHFLDLLRF 338
           I+   DL+R 
Sbjct: 259 IIDREDLVRL 268


>gi|328875458|gb|EGG23822.1| cystathionine-beta-synthase domain-containing protein
           [Dictyostelium fasciculatum]
          Length = 576

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/126 (23%), Positives = 61/126 (48%), Gaps = 24/126 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKL--------------KGIITEGDIFRNFHK 278
           V +  PL+  + +LSEK+   V ++DE  K+              +GI++  D+ +  H+
Sbjct: 448 VSVDTPLVQVLKLLSEKKISAVPILDESDKVVDVYSKGDVTLMAKQGILSPSDLDKPVHQ 507

Query: 279 DLNTLSVEDVMIKNPKVIL----EDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHF 332
            L+T S    + + P+ +      D L  V  + +++  H + +++ +D  +K  GI+  
Sbjct: 508 VLSTFS---RLWQRPEQVYSCTKNDKLGDVIEKCIKKRVHRL-IVVAIDSSKKVEGILSL 563

Query: 333 LDLLRF 338
            D+L F
Sbjct: 564 SDILNF 569


>gi|257075658|ref|ZP_05570019.1| CBS domain-containing protein [Ferroplasma acidarmanus fer1]
          Length = 133

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 5/104 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPK 294
             + D    ++E+  G + ++   + +KGI+TE DI +     K L T  V DV  K   
Sbjct: 12  STIYDGAKKMTEENKGSL-LLGSAESMKGIVTERDIIKAIAGGKSL-TAPVGDVATKENL 69

Query: 295 VIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + ED  +T A  L+ +HNI  L+V  +     G++   DL+R
Sbjct: 70  IFVHEDDSITKAAVLMSKHNIRHLIVKSENGAVTGVLSTRDLMR 113


>gi|239906876|ref|YP_002953617.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus
           RS-1]
 gi|239796742|dbj|BAH75731.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus
           RS-1]
          Length = 485

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 3/97 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+T++SE     + VVD G  L GI+T  D+   F KD  T   + +  KN   +   T 
Sbjct: 109 ALTVMSEYSISGLPVVD-GDTLVGIVTNRDV--RFVKDSVTTVGQVMTSKNLVTVPVGTT 165

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  A   L  + I  L+VVDD  K  G++   D+ + 
Sbjct: 166 LEEAKHHLHANRIEKLLVVDDNNKLRGLITIKDIEKI 202


>gi|229551017|ref|ZP_04439742.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|229315612|gb|EEN81585.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
          Length = 268

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL---TLPKEP 166
            +D+LI+V S  G  +EL   +  A++  +P++ ITS   S +  HAD+ L   +L K  
Sbjct: 167 NQDELIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVTHADVTLIAASLTK-- 224

Query: 167 ESCPHGLAPTTSAIMQL 183
           E     ++P    ++QL
Sbjct: 225 EEALGNISPQIPILIQL 241


>gi|168178495|ref|ZP_02613159.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|182671110|gb|EDT83084.1| CBS domain protein [Clostridium botulinum NCTC 2916]
          Length = 126

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A+ +++E       V DE   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 22  ALDLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 82  EDVISIAKKILDK-DIIAMPIVDSSKKLLGIVSVEDILK 119


>gi|24374804|ref|NP_718847.1| inositol-5-monophosphate dehydrogenase [Shewanella oneidensis MR-1]
 gi|24349481|gb|AAN56291.1|AE015766_7 inosine-5'-monophosphate dehydrogenase [Shewanella oneidensis MR-1]
          Length = 488

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D   + ++  F    VV++  +L GIIT  D+   F  D +  +VE+VM    +++  
Sbjct: 106 LADLKVLTAKNGFAGYPVVNDANELIGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E T L    +L+  H I  ++VVDD  K  G++   D 
Sbjct: 163 AEGTKLDEVQKLMHSHRIEKVLVVDDNFKLKGLITVKDF 201


>gi|86137280|ref|ZP_01055857.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. MED193]
 gi|85825615|gb|EAQ45813.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. MED193]
          Length = 607

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A  ++ +    CV + D G +L GI+T  D+      +   +S  V  VM K+P+ +   
Sbjct: 164 AAQLMRQHHISCVCISD-GDELLGILTTRDLTEKLLAEGLPISTPVSQVMTKDPRSLPPS 222

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +  +  + +H+I  + VV + Q+ +GI+   DL RF
Sbjct: 223 AIGSDVLHAMMEHHIGHIPVVQN-QQLVGIITQTDLTRF 260


>gi|297618499|ref|YP_003703658.1| hypothetical protein Slip_2357 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146336|gb|ADI03093.1| CBS domain containing membrane protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 216

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D M  NP VI  DT +  AMQL+R H+I  L V++   K +GIV   DL
Sbjct: 1   MKVKDKMTPNPIVIALDTTVAEAMQLMRDHSIRRLPVMNRG-KLVGIVTERDL 52


>gi|255728581|ref|XP_002549216.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240133532|gb|EER33088.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 618

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 3/89 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKNPKVILEDTL 301
           +++ KR  CV VVDE  +L GI T  D+ FR     LN   ++++ +M K+P     +  
Sbjct: 76  LMTAKRENCVLVVDEVGQLLGIFTAKDLAFRIVGSGLNANQVTIDQIMTKDPICANANNA 135

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              A+ L+ +     L V+DD    +G++
Sbjct: 136 AGEALTLMVEKGFRHLPVLDDDNHIVGVL 164


>gi|122921176|pdb|2NYC|A Chain A, Crystal Structure Of The Bateman2 Domain Of Yeast Snf4
          Length = 144

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L++ R   V ++DE   L  +    D+
Sbjct: 10  IGDLNIITQDNMKS------CQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDV 63

Query: 273 F----RNFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 64  LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 122

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 123 VGRLVGVLTLSDILKY 138


>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
          Length = 146

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVIL 297
           DA  +L++ + G V V++ G ++ GI++E DI R     ++   T  V D+M     V  
Sbjct: 27  DAARLLAQHKIGAVLVMN-GDRVAGILSERDIVRGLADAVDVCITAKVRDLMTAEVFVCH 85

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ED  +   M+++    I  L V+D+     GIV   D+++
Sbjct: 86  EDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVK 125


>gi|313224444|emb|CBY20234.1| unnamed protein product [Oikopleura dioica]
          Length = 651

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VI G G S H        +         V  A       G I RDD++I +S SG + 
Sbjct: 332 RIVILGCGTSYHAAIAARQLIEEMSDLPVTVDVASDFVDRSGAIYRDDVVIFVSQSGETA 391

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +  + L YA++    L+ IT+   S ++   D  +      E    G+A T +   Q  +
Sbjct: 392 DTLSALNYAKKRGCLLVGITNTVGSTISRETDCGIHCNAGQEI---GVASTKTFSAQFTV 448

Query: 186 GDALAIALLESRNFSENDFY 205
               A+ L E R FS+   Y
Sbjct: 449 LVLFALLLSEGR-FSKRKRY 467


>gi|157164971|ref|YP_001467503.1| inositol-5-monophosphate dehydrogenase [Campylobacter concisus
           13826]
 gi|112801059|gb|EAT98403.1| inosine-5'-monophosphate dehydrogenase [Campylobacter concisus
           13826]
          Length = 482

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 54/98 (55%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A++++S+     V V+D+ +KL GI+T  D+   F  +++TL V+D M K P +   + 
Sbjct: 107 EALSLMSDLHISGVPVIDKDRKLIGILTNRDL--RFETNMSTL-VKDRMTKAPLITAPKG 163

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L  A ++  Q+ +  L +VD   +  G++   DL +
Sbjct: 164 CTLDDAEKIFSQNRVEKLPIVDKDGRLDGLITIKDLKK 201


>gi|13542218|ref|NP_111906.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
 gi|14325652|dbj|BAB60555.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 278

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 36/57 (63%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +S E++M+K+P V+  +  L+ A  L+ ++N + L V+DD     G+++ +++L
Sbjct: 218 LPKISAEEIMVKDPTVVYANDRLSTAADLMIKYNYNQLPVLDDTHGIYGMLYDIEML 274


>gi|22126810|ref|NP_670233.1| regulator [Yersinia pestis KIM 10]
 gi|45440727|ref|NP_992266.1| LacI family regulatory protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51595632|ref|YP_069823.1| LacI family regulatory protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108806965|ref|YP_650881.1| LacI family regulatory protein [Yersinia pestis Antiqua]
 gi|108812883|ref|YP_648650.1| LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|145599711|ref|YP_001163787.1| LacI-family regulatory protein [Yersinia pestis Pestoides F]
 gi|149366761|ref|ZP_01888795.1| putative LacI-family regulatory protein [Yersinia pestis CA88-4125]
 gi|162418357|ref|YP_001605991.1| RpiR family transcriptional regulator [Yersinia pestis Angola]
 gi|165924419|ref|ZP_02220251.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936210|ref|ZP_02224779.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009723|ref|ZP_02230621.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211304|ref|ZP_02237339.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400191|ref|ZP_02305704.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419433|ref|ZP_02311186.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424227|ref|ZP_02315980.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170025031|ref|YP_001721536.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           YPIII]
 gi|186894698|ref|YP_001871810.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928408|ref|YP_002346283.1| putative LacI family regulatory protein [Yersinia pestis CO92]
 gi|229841202|ref|ZP_04461361.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843307|ref|ZP_04463453.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229894079|ref|ZP_04509265.1| putative LacI-family regulatory protein [Yersinia pestis Pestoides
           A]
 gi|229903312|ref|ZP_04518425.1| putative LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|270487116|ref|ZP_06204190.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294503260|ref|YP_003567322.1| putative LacI-family regulatory protein [Yersinia pestis Z176003]
 gi|21959838|gb|AAM86484.1|AE013895_6 putative regulator [Yersinia pestis KIM 10]
 gi|45435585|gb|AAS61143.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588914|emb|CAH20529.1| putative LacI-family regulatory protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776531|gb|ABG19050.1| LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|108778878|gb|ABG12936.1| putative LacI-family regulatory protein [Yersinia pestis Antiqua]
 gi|115347019|emb|CAL19911.1| putative LacI-family regulatory protein [Yersinia pestis CO92]
 gi|145211407|gb|ABP40814.1| LacI-family regulatory protein [Yersinia pestis Pestoides F]
 gi|149291135|gb|EDM41210.1| putative LacI-family regulatory protein [Yersinia pestis CA88-4125]
 gi|162351172|gb|ABX85120.1| transcriptional regulator, RpiR family [Yersinia pestis Angola]
 gi|165915824|gb|EDR34432.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923479|gb|EDR40611.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991119|gb|EDR43420.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207075|gb|EDR51555.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962174|gb|EDR58195.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050140|gb|EDR61548.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057076|gb|EDR66839.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751565|gb|ACA69083.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           YPIII]
 gi|186697724|gb|ACC88353.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           PB1/+]
 gi|229679082|gb|EEO75185.1| putative LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|229689654|gb|EEO81715.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697568|gb|EEO87615.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703964|gb|EEO90977.1| putative LacI-family regulatory protein [Yersinia pestis Pestoides
           A]
 gi|262361299|gb|ACY58020.1| putative LacI-family regulatory protein [Yersinia pestis D106004]
 gi|262365163|gb|ACY61720.1| putative LacI-family regulatory protein [Yersinia pestis D182038]
 gi|270335620|gb|EFA46397.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294353719|gb|ADE64060.1| putative LacI-family regulatory protein [Yersinia pestis Z176003]
 gi|320015902|gb|ADV99473.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 246

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V K  A   RV+  GIG SG +G   A   ++ G  S ++   +  +     + +D + I
Sbjct: 104 VAKQIAATRRVIFVGIGTSGALGKYSARFFSNVGKYSTYID--DPYYPINSDMYQDAVAI 161

Query: 117 VLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           +LS SG ++E+  I   A +FS+    +I++T+   S +A  AD+ ++    P
Sbjct: 162 ILSVSGETEEIIRI---ANQFSLQNCKIISLTNSESSTLAKMADLNISYHMPP 211


>gi|253680817|ref|ZP_04861620.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum D
           str. 1873]
 gi|253562666|gb|EES92112.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum D
           str. 1873]
          Length = 487

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++++ R   V +  +G KL GIIT  DI    N+ + +  +   + +I  P    E
Sbjct: 111 DALDLMAKYRISGVPITTDG-KLVGIITNRDIAFETNYQQAIKNIMTSENLITAP----E 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 166 NTTVEEAKEILKGHKIEKLPLVDKDNNLKGLITIKDI 202


>gi|191639716|ref|YP_001988882.1| Transcriptional regulator [Lactobacillus casei BL23]
 gi|190714018|emb|CAQ68024.1| Transcriptional regulator [Lactobacillus casei BL23]
 gi|327383830|gb|AEA55306.1| Transcriptional regulator, RpiR family [Lactobacillus casei LC2W]
 gi|327387009|gb|AEA58483.1| Transcriptional regulator, RpiR family [Lactobacillus casei BD-II]
          Length = 310

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 1/101 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+  S  +   L   L   G  + F H    +       T  D ++V S+SG + E
Sbjct: 134 IYLVGVSASALVAQDLYLKLIRAGYVAIFDHDTHTAVERAYYTTPADAMVVFSYSGLTKE 193

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK-EP 166
           +      ARR   P+IA+T    S +   A  V+ LP  EP
Sbjct: 194 VVLAAQQARRNRTPVIAVTRHEPSPLREAASCVIALPPTEP 234


>gi|160903333|ref|YP_001568914.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
 gi|160360977|gb|ABX32591.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
          Length = 483

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 9/99 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTL--SVEDVMIKNPKVI 296
           +A  I+ E R G + VVD+ + L GI+T  DI   +N  K    L    +++++    + 
Sbjct: 104 EAEKIMREYRIGGLPVVDDDKVLLGILTNRDIRFEQNMEKKAKELMTPYQNLVVAGSHIS 163

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           LE+     A ++L Q+ I  L +VDD +   G++   D+
Sbjct: 164 LEE-----AKEILHQNKIEKLPIVDDKRHIKGLITIKDI 197


>gi|157119402|ref|XP_001659398.1| AMP-activated protein kinase, gamma regulatory subunit [Aedes
           aegypti]
 gi|108875330|gb|EAT39555.1| AMP-activated protein kinase, gamma regulatory subunit [Aedes
           aegypti]
          Length = 751

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 34/129 (26%), Positives = 61/129 (47%), Gaps = 17/129 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLS 284
           S D+I +      +I A+    ++R   + +VD  ++LK I  + D+      K  N L 
Sbjct: 495 SYDNIEIATEDTSIITALHKFVDRRVSALPIVDSERRLKDIYAKFDVINLAAEKTYNDL- 553

Query: 285 VEDVMIKNPK------------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             DV +K                 L++TL TV  +++R   +  L+VVD+ +K IGI+  
Sbjct: 554 --DVSLKTANEHRNAWFEGVQHCKLDETLYTVMERIVRAE-VHRLVVVDEEEKVIGIISL 610

Query: 333 LDLLRFGII 341
            D+L + ++
Sbjct: 611 SDILLYLVL 619


>gi|69247502|ref|ZP_00604372.1| IMP dehydrogenase [Enterococcus faecium DO]
 gi|257880563|ref|ZP_05660216.1| IMP dehydrogenase [Enterococcus faecium 1,230,933]
 gi|257881298|ref|ZP_05660951.1| IMP dehydrogenase [Enterococcus faecium 1,231,502]
 gi|257886407|ref|ZP_05666060.1| IMP dehydrogenase [Enterococcus faecium 1,231,501]
 gi|257890515|ref|ZP_05670168.1| IMP dehydrogenase [Enterococcus faecium 1,231,410]
 gi|257893091|ref|ZP_05672744.1| IMP dehydrogenase [Enterococcus faecium 1,231,408]
 gi|258615285|ref|ZP_05713055.1| inosine 5'-monophosphate dehydrogenase [Enterococcus faecium DO]
 gi|260558213|ref|ZP_05830409.1| IMP dehydrogenase [Enterococcus faecium C68]
 gi|261206903|ref|ZP_05921592.1| IMP dehydrogenase [Enterococcus faecium TC 6]
 gi|289567403|ref|ZP_06447769.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           D344SRF]
 gi|293563237|ref|ZP_06677689.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1162]
 gi|293569173|ref|ZP_06680479.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1071]
 gi|294616950|ref|ZP_06696673.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1636]
 gi|294618576|ref|ZP_06698133.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1679]
 gi|294623745|ref|ZP_06702573.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium U0317]
 gi|314940145|ref|ZP_07847325.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a04]
 gi|314943023|ref|ZP_07849827.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133C]
 gi|314948141|ref|ZP_07851537.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0082]
 gi|314953445|ref|ZP_07856363.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133A]
 gi|314993817|ref|ZP_07859153.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133B]
 gi|314998159|ref|ZP_07863041.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a01]
 gi|68194827|gb|EAN09302.1| IMP dehydrogenase [Enterococcus faecium DO]
 gi|257814791|gb|EEV43549.1| IMP dehydrogenase [Enterococcus faecium 1,230,933]
 gi|257816956|gb|EEV44284.1| IMP dehydrogenase [Enterococcus faecium 1,231,502]
 gi|257822263|gb|EEV49393.1| IMP dehydrogenase [Enterococcus faecium 1,231,501]
 gi|257826875|gb|EEV53501.1| IMP dehydrogenase [Enterococcus faecium 1,231,410]
 gi|257829470|gb|EEV56077.1| IMP dehydrogenase [Enterococcus faecium 1,231,408]
 gi|260075387|gb|EEW63693.1| IMP dehydrogenase [Enterococcus faecium C68]
 gi|260078531|gb|EEW66233.1| IMP dehydrogenase [Enterococcus faecium TC 6]
 gi|289160799|gb|EFD08733.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           D344SRF]
 gi|291588142|gb|EFF19984.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1071]
 gi|291590190|gb|EFF21976.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1636]
 gi|291595163|gb|EFF26499.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1679]
 gi|291596699|gb|EFF27922.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium U0317]
 gi|291604776|gb|EFF34258.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1162]
 gi|313587871|gb|EFR66716.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a01]
 gi|313591708|gb|EFR70553.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133B]
 gi|313594548|gb|EFR73393.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133A]
 gi|313598223|gb|EFR77068.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133C]
 gi|313640650|gb|EFS05230.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a04]
 gi|313645395|gb|EFS09975.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0082]
          Length = 494

 Score = 38.1 bits (87), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D + + + DVM K+  V   
Sbjct: 112 DAEELMSKYRISGVPIVETLENRKLVGIITNRDM--RFVTDYH-MPIADVMTKDNLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDI 206


>gi|323136145|ref|ZP_08071227.1| inosine-5'-monophosphate dehydrogenase [Methylocystis sp. ATCC
           49242]
 gi|322398219|gb|EFY00739.1| inosine-5'-monophosphate dehydrogenase [Methylocystis sp. ATCC
           49242]
          Length = 495

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ +++      + VV+ G      KL GI+T  D+   F +D + L + ++M K  
Sbjct: 109 LADALALMAGHGISGIPVVERGPNSAKGKLVGILTNRDV--RFAQDKSQL-IAELMTKKL 165

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A +LL +H I  L+VVD+    +G+V   D+
Sbjct: 166 VTVREGVGQAEAQRLLHEHRIEKLLVVDEDFHCVGLVTVKDI 207


>gi|311111916|ref|YP_003983138.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa ATCC
           17931]
 gi|310943410|gb|ADP39704.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa ATCC
           17931]
          Length = 505

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 39/83 (46%), Gaps = 1/83 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNI 314
           VV E  KL+GIIT  DI      D  +  V DVM   P +     L    A  LL ++ I
Sbjct: 131 VVTEDGKLEGIITNRDIRYLSRSDYESTLVRDVMTPMPLITGSPNLTKDEAFALLSKNKI 190

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L ++D+  K  G++   D ++
Sbjct: 191 ERLPLIDEAGKLAGLITLKDFVK 213


>gi|328884502|emb|CCA57741.1| Inosine-5-monophosphate dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 500

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V     KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGVPVTSPDGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISGVDAMELLRRHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|315427061|dbj|BAJ48677.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428125|dbj|BAJ49711.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 151

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 14/130 (10%)

Query: 218 VCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V ASD+M    S P V +     + +A   + +   G + V+D+   L GIITE DI   
Sbjct: 19  VKASDLM----SYPPVVVSEDATVEEAAKTMWDNGVGSILVLDKDGTLVGIITERDILYA 74

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KDL   S+   M KN      D  +   ++ ++  NI  + VVD   K +G++
Sbjct: 75  ASHLLLGKDLKARSL---MSKNLVTASPDEDVASVLEKMKDFNIRHIPVVDQEGKPLGVL 131

Query: 331 HFLDLLRFGI 340
              D+L FG+
Sbjct: 132 SSRDILDFGV 141


>gi|289551625|ref|YP_003472529.1| 6-phospho-3-hexuloisomerase [Staphylococcus lugdunensis HKU09-01]
 gi|289181156|gb|ADC88401.1| 6-phospho-3-hexuloisomerase [Staphylococcus lugdunensis HKU09-01]
          Length = 182

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G+SG I +  A  L   G  ++ V  +         I   DL ++LS SGS+  
Sbjct: 39  IFTAGKGRSGFIANSFAMRLNQLGKDAYVVGESTTPS-----IKEHDLFVILSGSGSTAH 93

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQLAI 185
           L+ +   A+     ++ +T+   S +   A+ V+ LP   +    G   P  S   Q A+
Sbjct: 94  LRLLAEKAQTVGAKVVLLTTNPDSPIGELAETVIELPAGTKYNAEGSEQPLGSLFEQAAL 153

Query: 186 --GDALAIALLESRNFSE 201
              D++ + L+++ N  E
Sbjct: 154 LFLDSVVLGLMDTFNIDE 171


>gi|251780929|ref|ZP_04823849.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085244|gb|EES51134.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 484

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVI 296
           L DA  ++ + R   V + + G KL GI+T  D+    +F K ++ +  ++ +I  P   
Sbjct: 106 LQDAENLMGQYRISGVPITENG-KLVGILTNRDVTFETDFSKKISEVMTKENLITAP--- 161

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E+T +  A ++L++H I  L +VD  +   G++   D+
Sbjct: 162 -ENTSIDEAKEILKKHKIEKLPLVDKDRNLKGLITIKDI 199


>gi|153949960|ref|YP_001401695.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           IP 31758]
 gi|152961455|gb|ABS48916.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           IP 31758]
          Length = 246

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 8/113 (7%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V K  A   RV+  GIG SG +G   A   ++ G  S ++   +  +     + +D + I
Sbjct: 104 VAKQIAATRRVIFVGIGTSGALGKYSARFFSNVGKYSTYID--DPYYPINSDMYQDAVAI 161

Query: 117 VLSWSGSSDELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           +LS SG ++E+  I   A +FS+    +I++T+   S +A  AD+ ++    P
Sbjct: 162 ILSVSGETEEIIRI---ANQFSLQNCKIISLTNSESSTLAKMADLNISYHMPP 211


>gi|118443278|ref|YP_878931.1| inosine 5'-monophosphate dehydrogenase [Clostridium novyi NT]
 gi|118133734|gb|ABK60778.1| inosine-5'-monophosphate dehydrogenase [Clostridium novyi NT]
          Length = 484

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++++ R   V + + G KL GIIT  DI    N+ + +  +   + +I  P    E
Sbjct: 108 DALDLMAKYRISGVPITESG-KLVGIITNRDIAFETNYAQPIKNIMTSENLITAP----E 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +  A ++L+ H I  L +VD      G++   D+ +
Sbjct: 163 NTTVEEAKEILKGHKIEKLPLVDKENNLKGLITIKDIEK 201


>gi|14591601|ref|NP_143683.1| hypothetical protein PH1855 [Pyrococcus horikoshii OT3]
 gi|3258293|dbj|BAA30976.1| 172aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 172

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 38/122 (31%), Positives = 56/122 (45%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----------- 281
           V+   PL D I+  S +    V V DEG KL G IT  D+   F                
Sbjct: 46  VRPETPLFDLISRFSSEETSAVVVDDEG-KLIGFITMKDLLHYFVPPRRYSIAGFGMLKK 104

Query: 282 -TLS----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            TLS    VED+MI+ P VI  +  L  A++L+ +     L V+D  ++  G++   D++
Sbjct: 105 YTLSRATRVEDIMIRRPIVINVNDDLGQAIKLMVETGKHHLPVIDRERRVHGLLEVKDII 164

Query: 337 RF 338
           R 
Sbjct: 165 RL 166


>gi|319441916|ref|ZP_07991072.1| transcriptional regulator protein [Corynebacterium variabile DSM
           44702]
          Length = 274

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 4/113 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           R+V+ G G +  I    A     TG  S    A+  S  D L  +   D+++++S+  ++
Sbjct: 130 RIVVVGFGPARAIADYAAHRFRRTGVQSLSAGASGRSFADELAALAEGDVVLLMSYDRAT 189

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK-EPESCPHGLAPT 176
            E++ +   A    IP++ + SE    V   A +VL + +  PE  P   APT
Sbjct: 190 VEVRVLYDRAEALGIPVVQL-SEGVHTVDPRATVVLGVGRGNPEYSP-SYAPT 240


>gi|308370257|ref|ZP_07420816.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308371339|ref|ZP_07424621.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308372537|ref|ZP_07428992.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308376113|ref|ZP_07446087.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308378314|ref|ZP_07482187.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308379505|ref|ZP_07486531.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308380690|ref|ZP_07490752.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu011]
 gi|308324872|gb|EFP13723.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308329053|gb|EFP17904.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308332914|gb|EFP21765.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308344260|gb|EFP33111.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308352934|gb|EFP41785.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308356798|gb|EFP45649.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308360746|gb|EFP49597.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu011]
          Length = 488

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 112 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 168

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 169 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 197


>gi|296133143|ref|YP_003640390.1| Polynucleotide adenylyltransferase region [Thermincola sp. JR]
 gi|296031721|gb|ADG82489.1| Polynucleotide adenylyltransferase region [Thermincola potens JR]
          Length = 876

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 4/90 (4%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   + VVD G K+ GII+  D+ +  H  L    V+  M +    + EDT L+    
Sbjct: 336 RYGHTGMPVVD-GDKMVGIISRRDLDKARHHGLGHAPVKGFMSRKVITVNEDTPLSDIQH 394

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ ++NI  L VV D  K +GIV   D+L+
Sbjct: 395 LMIENNIGRLPVVRDS-KLVGIVSRTDVLK 423


>gi|228932239|ref|ZP_04095124.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827433|gb|EEM73182.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 287

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R  + +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGVTVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|229087169|ref|ZP_04219318.1| hypothetical protein bcere0022_37410 [Bacillus cereus Rock3-44]
 gi|228696141|gb|EEL48977.1| hypothetical protein bcere0022_37410 [Bacillus cereus Rock3-44]
          Length = 437

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            E   G   +VDE +K+ GI+T  D+     KD     +E VM K P  +     +  A 
Sbjct: 218 EETMHGRYPIVDENKKVLGIVTSKDMI-GIAKDT---PIEKVMTKQPITVNGKMSVAAAA 273

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    I +L VVD+  +  GI+   D+L+
Sbjct: 274 RMMVWEGIELLPVVDENNRLQGIISRQDVLQ 304


>gi|217972889|ref|YP_002357640.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS223]
 gi|217498024|gb|ACK46217.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS223]
          Length = 615

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILED 299
           A  ++   R   + V D   KL GI+T+ D+  R     L+  ++V   M  +P  I  +
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGHIAVHQAMTVSPISISSN 230

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 231 ALIFEAMLLMSEHNIHHLPIIDQ-DKAIGMVTSTDILR 267


>gi|119873069|ref|YP_931076.1| sugar isomerase (SIS) [Pyrobaculum islandicum DSM 4184]
 gi|119674477|gb|ABL88733.1| hexulose-6-phosphate isomerase [Pyrobaculum islandicum DSM 4184]
          Length = 202

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   +E++     ++++ G+G+SG +G   A  L   G  S+ V        + G     
Sbjct: 31  FVKTIEEMYRQNKKILVLGVGRSGLVGRAFAMRLRHLGARSYVVGETITPSVEEG----- 85

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           DL++ +S SG++  + A    A++    + AITS   S +A  AD+VL +P
Sbjct: 86  DLLVAISGSGTTQVVVAAAEAAKKMKARVAAITSYYDSPLARVADLVLFVP 136


>gi|147919878|ref|YP_686371.1| hypothetical protein RCIX1867 [uncultured methanogenic archaeon
           RC-I]
 gi|110621767|emb|CAJ37045.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 283

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 11/94 (11%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFH--------KDLNTLSVEDVMIKNP-KVILEDTLLTV 304
           +AVVDEG +L+GI++  D+    +        + L+ + V+ +M  +P  V   D +  V
Sbjct: 36  LAVVDEG-RLRGIVSRKDLGMRLNQSEPQWRRRPLDQVPVDLIMTPDPVTVEPSDEIQAV 94

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A  +L   ++S L+V  D Q  +GIV   DL+++
Sbjct: 95  ARTML-DRDVSSLIVYTDPQGVLGIVTKFDLVKY 127


>gi|77359305|ref|YP_338880.1| hypothetical protein PSHAa0338 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874216|emb|CAI85437.1| conserved protein of unknown function; putative signaling protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 842

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NF-HKDLNTLSVEDVMIKNPKV 295
           PLIDA+ ++       + +  + Q++ G+ TE D  + +F +  + + S++DVM      
Sbjct: 26  PLIDAVKLMRAHNISAIFIAQQ-QRILGVWTETDCLKLDFTNPAVTSTSIKDVMTSPVLS 84

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    LL+       QH +  L+V D+     G++   D++R
Sbjct: 85  VPSQQLLSDTALTFHQHGVRHLLVTDNNNVPCGVISITDIVR 126



 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V D      G+I+  DI RN   D  L   ++ D   KN  ++     L  A++L+R+ +
Sbjct: 108 VTDNNNVPCGVISITDIVRNQGLDHYLQFRTINDQYTKNITIVPSSLALNEAVKLMRERS 167

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
             V++V +  QK  GI+   DLL+ 
Sbjct: 168 EKVILVFNQQQKEHGIITQRDLLQL 192


>gi|157961141|ref|YP_001501175.1| inosine 5'-monophosphate dehydrogenase [Shewanella pealeana ATCC
           700345]
 gi|157846141|gb|ABV86640.1| inosine-5'-monophosphate dehydrogenase [Shewanella pealeana ATCC
           700345]
          Length = 490

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 6/98 (6%)

Query: 243 ITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--ED 299
           + +L+E+  F    VV+E  +L GIIT  D+   F  D  + +V+ VM    +++   E 
Sbjct: 109 VKVLTERNGFAGYPVVNEANELVGIITGRDV--RFITDW-SRTVDQVMTPKERLVTVPEG 165

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L    +L+  H +  ++VVDD  K  G++   D  +
Sbjct: 166 TKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQK 203


>gi|94968288|ref|YP_590336.1| inosine-5'-monophosphate dehydrogenase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550338|gb|ABF40262.1| inosine-5'-monophosphate dehydrogenase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 499

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 19/195 (9%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP + +  P   +  T     + I   L  A +++   S     +   GG LG +
Sbjct: 13  DDVLLLPAKSDVIPTATSTATKLTRNITINIPLISAAMDTVTESRMAIALAQQGG-LGIV 71

Query: 217 FVCASDVMHSG--DSIPLVKIGCPLIDAITILSE----------KRFGCVAV-VDEGQKL 263
               +    +G  D +   + G  ++D IT+  E          KR+    V V + +KL
Sbjct: 72  HRNLTIEQQAGEIDKVKRSESGM-IVDPITMSPENKISEALDVMKRYRISGVPVTKNKKL 130

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDD 322
            GI+T  D+      D+    + +VM K   + +   T L  A ++L QH +  L+VVDD
Sbjct: 131 VGILTNRDLRFETRTDI---PISEVMTKENLITVPVGTTLEDAEEILHQHRVEKLLVVDD 187

Query: 323 CQKAIGIVHFLDLLR 337
             +  G++   D+ +
Sbjct: 188 RYELKGLITVKDIQK 202


>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 146

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 6/103 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPK 294
           ++DA+ +++EK  G + V+ EGQ + GI+TE D  R           TL V DVM ++  
Sbjct: 25  VLDALKLMAEKGIGALLVM-EGQAIVGIVTERDYARKIALLGRTSAATL-VRDVMTRDVL 82

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         M ++  + +  L VVDD  +  G++   DL++
Sbjct: 83  YVRPSQSSEECMAIMTSNRLRHLPVVDDAGQLQGLISIGDLVK 125


>gi|94313693|ref|YP_586902.1| putative RpiR family transcriptional regulator [Cupriavidus
           metallidurans CH34]
 gi|93357545|gb|ABF11633.1| putative transcriptional regulator of the RpiR family [Cupriavidus
           metallidurans CH34]
          Length = 301

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 1/88 (1%)

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G S  +  +    LA  G P    H A         +TRDD+++  S SGS  E+ A   
Sbjct: 144 GGSTFMADEARYRLARLGHPVATYHDALLQKMVAATLTRDDVVLAFSASGSVPEILASCD 203

Query: 133 YARRFSIPLIAITSENKSVVACHADIVL 160
            AR +   LIA+T+   S +A  AD++L
Sbjct: 204 IAREYGARLIAVTALG-SPLAARADVLL 230


>gi|293553533|ref|ZP_06674160.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1039]
 gi|291602288|gb|EFF32513.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1039]
          Length = 494

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D + + + DVM K+  V   
Sbjct: 112 DAEELMSKYRISGVPIVETLENRKLVGIITNRDM--RFVTDYH-MPIADVMTKDNLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDI 206


>gi|294617779|ref|ZP_06697393.1| transcriptional regulator [Enterococcus faecium E1679]
 gi|291595953|gb|EFF27232.1| transcriptional regulator [Enterococcus faecium E1679]
          Length = 239

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 33/141 (23%), Positives = 58/141 (41%), Gaps = 10/141 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGS 123
           R+ +   G S     K  + +       F + A E S    +   +  +D  I +S+SG 
Sbjct: 83  RIFLFAKGDSQITARKFQNKMVKLN--KFLIMAEEYSDSSWNAANLISEDCAIFISYSGR 140

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
               + I+ Y +    P + IT    S +A  AD+ L + +E     +  A   +   Q+
Sbjct: 141 IHHYERIMTYLKHVEAPTLLITGNQHSEMAKQADMCLVISQE----EYDFAKVATFSSQI 196

Query: 184 AIGDALA--IALLESRNFSEN 202
           A    L    +++ S+NF EN
Sbjct: 197 AFDYVLNTLFSVIYSQNFEEN 217


>gi|258538271|ref|YP_003172770.1| hypothetical protein LC705_00080 [Lactobacillus rhamnosus Lc 705]
 gi|257149947|emb|CAR88919.1| Putative protein without homology [Lactobacillus rhamnosus Lc 705]
          Length = 263

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 5/77 (6%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL---TLPKEP 166
            +D+LI+V S  G  +EL   +  A++  +P++ ITS   S +  HAD+ L   +L K  
Sbjct: 162 NQDELIMVASLRGDDEELLKAMKIAKQRQVPILLITSNRYSQLVTHADVTLIAASLTK-- 219

Query: 167 ESCPHGLAPTTSAIMQL 183
           E     ++P    ++QL
Sbjct: 220 EEALGNISPQIPILIQL 236


>gi|255526254|ref|ZP_05393171.1| CBS domain containing membrane protein [Clostridium carboxidivorans
           P7]
 gi|296186248|ref|ZP_06854652.1| CBS domain pair [Clostridium carboxidivorans P7]
 gi|255510034|gb|EET86357.1| CBS domain containing membrane protein [Clostridium carboxidivorans
           P7]
 gi|296049049|gb|EFG88479.1| CBS domain pair [Clostridium carboxidivorans P7]
          Length = 139

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 20/117 (17%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------KDLNTLSVED 287
           I   +  A+  +   R+  + ++D+G +  G +TEGD+            KD N + V D
Sbjct: 18  INSTMRQALERMEYHRYTAIPILDDGGRYIGTLTEGDLLWKLKNTKNLDFKDTNKIKVND 77

Query: 288 V---MIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   MI  P  I   +ED   T   Q       + + VVDD +  IGI+   D++ +
Sbjct: 78  IPRRMINKPVHIDSNIEDLFYTSVNQ-------NFIPVVDDNEIFIGIIKRSDIINY 127


>gi|121594368|ref|YP_986264.1| CBS domain-containing protein [Acidovorax sp. JS42]
 gi|120606448|gb|ABM42188.1| CBS domain containing protein [Acidovorax sp. JS42]
          Length = 157

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 221 SDVMHSGDSIPLVKIGCP---LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF 276
           SDVM  G     ++   P   L  A   + E   G + V + G++L G++T+ D + R  
Sbjct: 5   SDVMTRG-----IRTMAPDDTLTTAAQAMRELNVGALPVCN-GERLVGMVTDRDMVLRGL 58

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++     + +VM +      ED  +  A+  +R   +  L VVD  Q+ +GIV   D+
Sbjct: 59  AEERTHSRLNEVMFREVYYCYEDQPVDEAIASMRAMQVRRLPVVDRDQRVVGIVSLGDV 117


>gi|41410376|ref|NP_963212.1| inositol-5-monophosphate dehydrogenase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465329|ref|YP_883491.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium avium 104]
 gi|254776785|ref|ZP_05218301.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41399210|gb|AAS06828.1| GuaB2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166616|gb|ABK67513.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium avium 104]
          Length = 531

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  T  V +VM K P +  ++ +    A+ L
Sbjct: 153 RISGLPVVDDSGALVGIITNRDM--RFEVD-QTKKVAEVMTKAPLITAQEGVSADAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L +VD   +  G++   D ++
Sbjct: 210 LRRNKIEKLPIVDGHGRLTGLITVKDFVK 238


>gi|28379835|ref|NP_786727.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|28272676|emb|CAD65605.1| transcription regulator [Lactobacillus plantarum WCFS1]
          Length = 282

 Score = 38.1 bits (87), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDL 114
           A  ++ A K  V + G+G S  + +         G     +H+ +     +GM T R ++
Sbjct: 121 AASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKA--VIHSQDPHLLAVGMTTQRQNV 178

Query: 115 IIVL-SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++L S SG   E   +   A   +IP+I ++    S +   ADI+L      E+     
Sbjct: 179 VLLLISNSGEKSESIRLANLAHSINIPVIVLSRNATSTLGKLADIILINDDSEENQTARA 238

Query: 174 APTTSAIMQLAIGDAL 189
           A TTS + QL + D L
Sbjct: 239 AATTSLMAQLYVVDLL 254


>gi|257427357|ref|ZP_05603756.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275550|gb|EEV07023.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 182

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 8/145 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG + +  A  L      +  V  +         I  +D+ +++S SGS++ 
Sbjct: 39  IFVAGKGRSGFVANSFAMRLNQLDKQAHVVGESTTP-----AIKSNDVFVIISGSGSTEH 93

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L+ +   A+     ++ IT+   S +   A   + LP   +   HG A    ++ + A  
Sbjct: 94  LRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYDEHGSAQPLGSLFEQASQ 153

Query: 187 ---DALAIALLESRNFSENDFYVLH 208
              D++ + L+   N SE      H
Sbjct: 154 LFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|239628778|ref|ZP_04671809.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518924|gb|EEQ58790.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K KA+  RV++TG+G S +    + S L   G P+    + E S      I    L+I +
Sbjct: 38  KEKAM-NRVILTGMGSSLYAARCVQSYLTGHGIPALAFSSFELSRFQFNQIDSRCLVIAI 96

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           S SG S E+  +   AR+ ++ ++ I +  +S +    D +L +  + E
Sbjct: 97  SQSGKSPEVVELADKARKVTV-VVGIHNYEESPLGAVCDFMLQIHGDKE 144


>gi|153010445|ref|YP_001371659.1| RpiR family transcriptional regulator [Ochrobactrum anthropi ATCC
           49188]
 gi|151562333|gb|ABS15830.1| transcriptional regulator, RpiR family [Ochrobactrum anthropi ATCC
           49188]
          Length = 282

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 3/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  +    +  L   G        +     ++  +   D++  LS+SG+S 
Sbjct: 134 RIHLAGVGASSLVARDFSYKLMKLGRNVMHDSDSHIQMANVSTLHEGDVLFALSYSGTSI 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E   I   A+++   +IA+T  N++ +   ADI L    + E      +  T+   QL +
Sbjct: 194 ETLRIAEQAKKWGATVIAVTGLNENPLNKIADIRLYTVADEERVRS--SSITARDAQLVL 251

Query: 186 GDALAIALLESRNFSENDF 204
            D L I L + R    ND+
Sbjct: 252 TDLLFILLFQ-RQQDANDY 269


>gi|85708836|ref|ZP_01039902.1| IMP dehydrogenase [Erythrobacter sp. NAP1]
 gi|85690370|gb|EAQ30373.1| IMP dehydrogenase [Erythrobacter sp. NAP1]
          Length = 484

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 2/97 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++   R   + V D   KL GI+T  D+   F ++      E +  +N   +  
Sbjct: 104 LGDAQALMEANRISGIPVTDSEGKLCGILTNRDV--RFAENPQQPVRELMTTENLATVPL 161

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T    A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 162 GTSQEDARRLLHQRRIEKLLVVDDDYRCIGLITVKDI 198


>gi|313220306|emb|CBY31163.1| unnamed protein product [Oikopleura dioica]
          Length = 665

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 58/140 (41%), Gaps = 4/140 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VI G G S H        +         V  A       G I RDD++I +S SG + 
Sbjct: 332 RIVILGCGTSYHAAIAARQLIEEMSDLPVTVDVASDFVDRSGAIYRDDVVIFVSQSGETA 391

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +  + L YA++    L+ IT+   S ++   D  +      E    G+A T +   Q  +
Sbjct: 392 DTLSALNYAKKRGCLLVGITNTVGSTISRETDCGIHCNAGQEI---GVASTKTFSAQFTV 448

Query: 186 GDALAIALLESRNFSENDFY 205
               A+ L E R FS+   Y
Sbjct: 449 LVLFALLLSEGR-FSKRKRY 467


>gi|313681917|ref|YP_004059655.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM
           16994]
 gi|313154777|gb|ADR33455.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM
           16994]
          Length = 481

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  ++SE R   V VVD   KL GI+T  D+   F KDL  L+   VM   P V  +
Sbjct: 105 LAEAEELMSEFRISGVPVVDGHNKLLGILTNRDM--RFEKDLKKLA-SAVMTPMPLVTAK 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A Q++ ++ I  L ++D+     G++   D+ +
Sbjct: 162 AGITLEEAEQIMHKNKIEKLPIIDENGFLKGLITIKDIKK 201


>gi|15922174|ref|NP_377843.1| Na(+)/H(+) antiporter [Sulfolobus tokodaii str. 7]
 gi|15622963|dbj|BAB66952.1| 500aa long hypothetical Na(+)/H(+) antiporter [Sulfolobus tokodaii
           str. 7]
          Length = 500

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 52/98 (53%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +AI I++E+ +  + VVDE  +  G ++   +      D   L V D+     K++ + +
Sbjct: 398 EAIGIINERGYRAIVVVDENFRPLGYVSVSQLLEIDPNDYEILKVCDIYKNEVKILEKKS 457

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +++ R+    V+++VDD  + + +V+  +LLR+
Sbjct: 458 KVIDVLRVFRETEEPVVVIVDDDGRLLSVVYERELLRY 495


>gi|319777325|ref|YP_004136976.1| transcriptional regulator, rpir family protein [Mycoplasma
           fermentans M64]
 gi|318038400|gb|ADV34599.1| Transcriptional regulator, RpiR family protein [Mycoplasma
           fermentans M64]
          Length = 266

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI-IVLSWSGSS 124
           +++I GIG SG IGS LA  L   G  S  +++            +DD+  I++S S  +
Sbjct: 131 KLIIFGIGTSGIIGSYLAKQLTRIGIISVCINSIHDFKDAYNESNKDDVFYIIISKSFKN 190

Query: 125 DELK--AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            E+K  A +     F+  ++   +EN S   C + I+       ++  + +    S  M 
Sbjct: 191 HEVKEAAEILDKSNFNFQILT-RNENVSYANCTSPIIYDYIPAQKNFNYDIVSKLSLFML 249

Query: 183 LAIGDALAIALLESRN 198
           + I    A  L++++N
Sbjct: 250 IDIIYIYAKTLIDNKN 265


>gi|296123742|ref|YP_003631520.1| inosine-5'-monophosphate dehydrogenase [Planctomyces limnophilus
           DSM 3776]
 gi|296016082|gb|ADG69321.1| inosine-5'-monophosphate dehydrogenase [Planctomyces limnophilus
           DSM 3776]
          Length = 498

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 8/101 (7%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDT 300
           A  I+ ++  G V V   G +LKGI+T  D+     KD     + +VM K   V   E+T
Sbjct: 110 AWEIMEQRNIGGVPVTQNG-RLKGILTRRDLRFLASKDT---PISEVMTKENLVTAKENT 165

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL---LRF 338
            L  A ++L ++ +  L++VDD  +  G++   D+   LRF
Sbjct: 166 TLEEAERILLENKVEKLLLVDDEFQLKGLITIKDIDKNLRF 206


>gi|206601591|gb|EDZ38074.1| Inosine-5'-monophosphate dehydrogenase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 489

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A+ I++  R   + V+ + +KL GI+T  D+   F  D N   V DVM     V     
Sbjct: 109 EALNIMATYRISGIPVI-KNRKLVGIVTNRDL--RFEMDGNR-KVSDVMTSRKLVTAPVG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A +L ++H+I  L VVD+  +  G++   D+
Sbjct: 165 TTLEAAKELFQKHHIEKLPVVDENNELQGLITIKDI 200


>gi|187933700|ref|YP_001884623.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum B
           str. Eklund 17B]
 gi|187721853|gb|ACD23074.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 484

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVIL 297
           L DA  ++ + R   V + + G KL GI+T  D+   F  D  T  + DVM K N     
Sbjct: 106 LQDAENLMGQYRISGVPITENG-KLVGILTNRDV--TFETDF-TKKISDVMTKENLITAP 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E+T +  A ++L++H I  L +VD      G++   D+
Sbjct: 162 ENTSIDEAKEILKKHKIEKLPLVDGEGNLKGLITIKDI 199


>gi|197123502|ref|YP_002135453.1| signal-transduction protein with CBS domains [Anaeromyxobacter sp.
           K]
 gi|196173351|gb|ACG74324.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. K]
          Length = 139

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+ +A  ++SE++ G VAV D G ++ G++TE D+         D N    E +    P
Sbjct: 19  APIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGGDANHPMREAMRQGLP 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V    T + VA  L+R H    L+V +  Q  +G+V   D+++ 
Sbjct: 78  RVSSSATEVEVA-GLMRDHTTRHLLVEEGGQ-VVGVVSMRDIIQL 120


>gi|238809502|dbj|BAH69292.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 267

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI-IVLSWSGSS 124
           +++I GIG SG IGS LA  L   G  S  +++            +DD+  I++S S  +
Sbjct: 132 KLIIFGIGTSGIIGSYLAKQLTRIGIISVCINSIHDFKDAYNESNKDDVFYIIISKSFKN 191

Query: 125 DELK--AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            E+K  A +     F+  ++   +EN S   C + I+       ++  + +    S  M 
Sbjct: 192 HEVKEAAEILDKSNFNFQILT-RNENVSYANCTSPIIYDYIPAQKNFNYDIVSKLSLFML 250

Query: 183 LAIGDALAIALLESRN 198
           + I    A  L++++N
Sbjct: 251 IDIIYIYAKTLIDNKN 266


>gi|298674991|ref|YP_003726741.1| hypothetical protein Metev_1059 [Methanohalobium evestigatum
           Z-7303]
 gi|298287979|gb|ADI73945.1| protein of unknown function DUF39 [Methanohalobium evestigatum
           Z-7303]
          Length = 499

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A   + E  F  + VV E  KL GI+T  DI +   ++   + V+D M ++      + 
Sbjct: 399 EAAKKIMESTFDHLPVVSEDSKLVGIVTAWDISKAVAQEKYHI-VKDFMTRDVVTATTEE 457

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +A   + Q  +S L VVD+ ++ +GI+   D+ + 
Sbjct: 458 TIDIAAHHIDQKEVSALPVVDNERRVVGIITSNDISKL 495


>gi|296284630|ref|ZP_06862628.1| CBS [Citromicrobium bathyomarinum JL354]
          Length = 121

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 2/86 (2%)

Query: 254 VAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           + VVD+   L G++T+ DI  R   K + +   VE+VM  +P  +  D  +      +  
Sbjct: 9   IPVVDDSGALVGVVTDRDIACRCVAKGNSSDQRVEEVMTSSPVTVTADASVDECCTKMED 68

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  L V+DD  K  GIV   D+ R
Sbjct: 69  NQVRRLPVIDDEGKCCGIVAQADIAR 94


>gi|317054428|ref|YP_004118453.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
 gi|316952423|gb|ADU71897.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
          Length = 296

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 34/59 (57%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           + R D++I+++   +  E  A +  A+R  IP+I +T+   S  A  AD+V+ +P+  E
Sbjct: 189 LQRGDVLIMMAQKSAHREGSATVKEAKRLGIPIILLTNAPDSFFAKEADVVINVPRGGE 247


>gi|257899257|ref|ZP_05678910.1| IMP dehydrogenase [Enterococcus faecium Com15]
 gi|257837169|gb|EEV62243.1| IMP dehydrogenase [Enterococcus faecium Com15]
          Length = 494

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D + + + DVM K+  V   
Sbjct: 112 DAEELMSKYRISGVPIVETLENRKLVGIITNRDM--RFVTDYH-MPIADVMTKDNLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDI 206


>gi|167630470|ref|YP_001680969.1| inosine-5'-monophosphate dehydrogenase [Heliobacterium
           modesticaldum Ice1]
 gi|167593210|gb|ABZ84958.1| inosine-5'-monophosphate dehydrogenase [Heliobacterium
           modesticaldum Ice1]
          Length = 485

 Score = 38.1 bits (87), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 6/101 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVI 296
           + DA+ I+       V + DE  KL GI+T  D+    NF   + T+  +D ++  P   
Sbjct: 108 VTDALAIMERYHISGVPIADEEGKLVGILTNRDLRFETNFDIPIATVMTKDNLVTAPV-- 165

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              T L  A ++LR H +  L +VD+     G++   D+ +
Sbjct: 166 --GTSLAEAKEILRLHKVEKLPIVDNEGHLKGLITIKDIQK 204


>gi|323137919|ref|ZP_08072994.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Methylocystis sp. ATCC 49242]
 gi|322396922|gb|EFX99448.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Methylocystis sp. ATCC 49242]
          Length = 609

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +  + L+IV+S SG + +  A L YAR     +++I +   S +A  +D V      PE 
Sbjct: 336 LPENGLMIVVSQSGETADTLAALRYAREHGQHILSIVNVETSTIARESDTVAKTLAGPEI 395

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              G+A T +   QLA+   LA+AL  +R 
Sbjct: 396 ---GVASTKAFTCQLAVFACLALALGRARG 422


>gi|257865948|ref|ZP_05645601.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC30]
 gi|257872281|ref|ZP_05651934.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC10]
 gi|257799882|gb|EEV28934.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC30]
 gi|257806445|gb|EEV35267.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC10]
          Length = 603

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G    + L         VH +     ++ +++ +   + LS SG + 
Sbjct: 293 RIYIIACGTSNHAGWAAKAILEKLTQIPVEVHLSSEFGYNMPLLSANPFFLFLSQSGETA 352

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    +  +P + IT+   S ++  A+  L L   PE     +A T +   Q+A+
Sbjct: 353 DSRQVLVTINQLGLPSLTITNVAGSTLSREANHTLLLHAGPEIA---VASTKAYTAQIAV 409

Query: 186 GDALAIALLESRNFSEN-DFYVLH 208
              LA A+ + +   E  DF V H
Sbjct: 410 MTLLAKAIGDEKAVPEALDFDVFH 433


>gi|239630550|ref|ZP_04673581.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526833|gb|EEQ65834.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 249

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 19/118 (16%)

Query: 58  EKIKAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH------GDLGMIT 110
           ++I A++ R + +   G SG IG+ +       G   FF    +++        DLG   
Sbjct: 109 QRIAAVEDRYLYVYAAGFSGVIGNYMFKKFQILGKRCFFSTPGDSAALLENYLEDLG--- 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKE 165
              L +V+S SG   E +++L  AR  S   IP++A T   +S +A  AD  LT+P E
Sbjct: 166 ---LFLVVSKSG---ETQSVLDKARLVSSLPIPIVAFTGNPESTLAKIADWTLTVPDE 217


>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
 gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
 gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
 gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
 gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
          Length = 227

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 284 SVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D M K P   V+   T +  A++ L QH IS   VVDD  K +G+V   DLL
Sbjct: 65  TVGDFMTKRPNLHVVTPATSVDEALETLVQHKISGFPVVDDTGKLVGVVSDYDLL 119


>gi|322383132|ref|ZP_08056959.1| inosine 5'-monophosphate dehydrogenase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152794|gb|EFX45420.1| inosine 5'-monophosphate dehydrogenase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 485

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++++ R   V +V+E  KL GI+T  D+    +F   +  +   D ++  P     
Sbjct: 110 DAEALMAKYRISGVPIVNEQNKLVGILTNRDLRFVHDFSIQIKEVMTHDNLVTAPV---- 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A  +L+QH I  L +VD+  +  G++   D+ +
Sbjct: 166 GTTLEQAEVILQQHKIEKLPLVDEHNELKGLITIKDIEK 204


>gi|294506516|ref|YP_003570574.1| mannose-1-phosphate guanyltransferase [Salinibacter ruber M8]
 gi|294342844|emb|CBH23622.1| putative mannose-1-phosphate guanyltransferase [Salinibacter ruber
           M8]
          Length = 349

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 1/97 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           +A+ ++ E       V +E  +L+G+ T+GDI R   KDL+    V  VM ++P      
Sbjct: 17  EALEVIDEGGVQIAIVANEEDRLRGVATDGDIRRGILKDLDLDAPVASVMNEDPITARPK 76

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +  +R   I  + +VD+  + +GI    DLL
Sbjct: 77  EDRQSLIDTMRARRIHQIPLVDNEGRVVGIEVLDDLL 113


>gi|158431294|pdb|2YVY|A Chain A, Crystal Structure Of Magnesium Transporter Mgte Cytosolic
           Domain, Mg2+ Bound Form
          Length = 278

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +   +V   + M   + +  ++   P  DA TI        + VVDE  +LKG+++ 
Sbjct: 138 GGLMTPEYVAVREGMTVEEVLRFLRRAAP--DAETIY------YIYVVDEKGRLKGVLSL 189

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+      D  T   E   I NPKV+    DT      +L+  ++ +VL VVD+  + +
Sbjct: 190 RDLI---VADPRTRVAE---IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 243

Query: 328 GIVHFLDLL 336
           GIV   D+L
Sbjct: 244 GIVTVDDVL 252


>gi|85726179|gb|ABC79612.1| IMP dehydrogenase [Borrelia hermsii DAH]
          Length = 485

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/95 (28%), Positives = 49/95 (51%), Gaps = 3/95 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  ++S+ +   + V D+  K+ G++T  DI   +  D N + V + M K      ED 
Sbjct: 110 EARILISKHKISALPVTDKTGKILGLVTSRDI--KYITDDN-VPVMNAMTKKLITAKEDI 166

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            LT A ++L +H I  L++VD+     G++   D+
Sbjct: 167 TLTEAKEILSKHKIEKLLIVDEANNLRGLITCKDI 201


>gi|323305002|gb|EGA58756.1| Snf4p [Saccharomyces cerevisiae FostersB]
          Length = 184

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L++ R   V ++DE   L  +    D+
Sbjct: 50  IGDLNIITQDNMKS------CQMTTPVIDVIQMLTQGRVSSVPIIDENGYLINVYEAYDV 103

Query: 273 F----RNFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 104 LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 162

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 163 VGRLVGVLTLSDILKY 178


>gi|315126105|ref|YP_004068108.1| hypothetical protein PSM_A1012 [Pseudoalteromonas sp. SM9913]
 gi|315014619|gb|ADT67957.1| hypothetical protein PSM_A1012 [Pseudoalteromonas sp. SM9913]
          Length = 422

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 232 LVKIGCPLIDAITILSE---KRFG-CVAVVDE----GQKLKGIITE-GDIFRNFHK---- 278
           L+KI  P +  +  ++    + FG   A +DE     ++LK ++ E G +    H+    
Sbjct: 135 LLKILFPFVVVVNWMTNGILRLFGISAAQIDEHSMSKEELKTVLNESGALIPARHQSMLT 194

Query: 279 ---DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              DL  ++VED+MI   +++   + D    ++ QL    +  VL+  D+   A+G +H 
Sbjct: 195 SILDLEQVTVEDIMIPRNEIVAIDINDDWKIISKQLTHAQHTRVLLYRDNIDDAVGFIHS 254

Query: 333 LDLLRF 338
            D LR 
Sbjct: 255 RDALRL 260


>gi|222111014|ref|YP_002553278.1| cbs domain-containing protein [Acidovorax ebreus TPSY]
 gi|221730458|gb|ACM33278.1| CBS domain containing protein [Acidovorax ebreus TPSY]
          Length = 157

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 55/119 (46%), Gaps = 10/119 (8%)

Query: 221 SDVMHSGDSIPLVKIGCP---LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF 276
           SDVM  G     ++   P   L  A   + E   G + V D G++L G++T+ D + R  
Sbjct: 5   SDVMTRG-----IRTMAPDDTLTTAAQAMRELNVGALPVCD-GERLVGMVTDRDMVLRGL 58

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++     + +VM +      ED  +  A+  +R   +  L VVD  Q+ +GIV   D+
Sbjct: 59  AEERTHSRLNEVMSREVYYCYEDQPVDEAIASMRDMQVRRLPVVDRDQRLVGIVSLGDV 117


>gi|229580856|ref|YP_002839255.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228011572|gb|ACP47333.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
          Length = 250

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V +S+V+  G+          +++A  +++      + V  +  KL GIIT  DI +   
Sbjct: 133 VMSSNVVSIGEE-------STILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADIVKYLA 185

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+ N   V D   KNP  I     +  A +L+ +  I  L V+++ QK +GIV   DL+
Sbjct: 186 KNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMEN-QKLVGIVTERDLM 243


>gi|91773710|ref|YP_566402.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712725|gb|ABE52652.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 258

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFG-CVAVVDEGQK-LKGIITEGDIFRNFHKD-LNTLSVED 287
           PL+     ++DA  ++ E   G C  V  E ++ + GI++  DI  N   + +NT    D
Sbjct: 73  PLITPKTDIMDAARLIIESGVGRCPIVRSETEREIVGILSNSDILANIGSNRINTKVAAD 132

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           VM  +        LLT    +L   N S L VV +  +  G++   D++RFG I
Sbjct: 133 VMTTDIISCNPHDLLTKIWPILLTSNYSGLPVVTNADELQGMITIRDIIRFGFI 186


>gi|163940057|ref|YP_001644941.1| RpiR family transcriptional regulator [Bacillus weihenstephanensis
           KBAB4]
 gi|229011538|ref|ZP_04168724.1| RpiR family transcriptional regulator [Bacillus mycoides DSM 2048]
 gi|229167102|ref|ZP_04294845.1| RpiR family transcriptional regulator [Bacillus cereus AH621]
 gi|163862254|gb|ABY43313.1| transcriptional regulator, RpiR family [Bacillus weihenstephanensis
           KBAB4]
 gi|228616336|gb|EEK73418.1| RpiR family transcriptional regulator [Bacillus cereus AH621]
 gi|228749693|gb|EEL99532.1| RpiR family transcriptional regulator [Bacillus mycoides DSM 2048]
          Length = 284

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A I L T  +E
Sbjct: 176 GLLTKEAVVIAISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLAHITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|227550623|ref|ZP_03980672.1| IMP dehydrogenase [Enterococcus faecium TX1330]
 gi|257888111|ref|ZP_05667764.1| IMP dehydrogenase [Enterococcus faecium 1,141,733]
 gi|257896270|ref|ZP_05675923.1| IMP dehydrogenase [Enterococcus faecium Com12]
 gi|293379351|ref|ZP_06625495.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium PC4.1]
 gi|293572971|ref|ZP_06683915.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E980]
 gi|227180243|gb|EEI61215.1| IMP dehydrogenase [Enterococcus faecium TX1330]
 gi|257824165|gb|EEV51097.1| IMP dehydrogenase [Enterococcus faecium 1,141,733]
 gi|257832835|gb|EEV59256.1| IMP dehydrogenase [Enterococcus faecium Com12]
 gi|291606957|gb|EFF36335.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E980]
 gi|292641874|gb|EFF60040.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium PC4.1]
          Length = 494

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D + + + DVM K+  V   
Sbjct: 112 DAEELMSKYRISGVPIVETLENRKLVGIITNRDM--RFVTDYH-MPIADVMTKDNLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDI 206


>gi|190346549|gb|EDK38658.2| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 551

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 5/97 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
           ++S KR  CV +VD+ +KL G+ T  D+ FR      D    +V  VM  NP      + 
Sbjct: 81  LMSAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSGLDATVATVGQVMTSNPLTSSATSP 140

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + A+  + +H    + VV+D      I+  LD++ F
Sbjct: 141 ASQALDQMLEHKFRHMPVVEDSNTE--IIGVLDIVTF 175


>gi|162447131|ref|YP_001620263.1| RpiR family transcriptional regulator [Acholeplasma laidlawii
           PG-8A]
 gi|161985238|gb|ABX80887.1| transcriptional regulator, RpiR family [Acholeplasma laidlawii
           PG-8A]
          Length = 281

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 8/88 (9%)

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL---T 161
           D   I   D++I +S SG + E+ +    A+    P+I+IT    S++A  +D+VL    
Sbjct: 171 DASFINNKDVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILADISDVVLYTSA 230

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           L  E  S     A  TS I Q+++ DAL
Sbjct: 231 LESEFRS-----AAMTSRISQMSVVDAL 253


>gi|91200868|emb|CAJ73923.1| similar to inosine-5'-monophosphate dehydrogenase related protein
           II [Candidatus Kuenenia stuttgartiensis]
          Length = 165

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 5/81 (6%)

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIITE D+ +     K L  ++ ED+M K P  + EDT +   + ++ +  I  + VV D
Sbjct: 51  GIITEFDLIKAMDQGKSLEQVTAEDIMTKKPICVEEDTTIEKVIHIMAKEAIIRIPVVKD 110

Query: 323 CQKAIGIVHFLDLLR--FGII 341
               +G++   D+LR  +G++
Sbjct: 111 MV-PVGVISRGDVLRCVYGVL 130


>gi|91976741|ref|YP_569400.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB5]
 gi|91683197|gb|ABE39499.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB5]
          Length = 498

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 52/102 (50%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV   EG+   KL GI+T  D+   F  D +    E +  +N 
Sbjct: 111 LADALALMNQYGFSGIPVVTGAEGRGPGKLIGILTNRDV--RFATDPSQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVDD  + +G++   D+
Sbjct: 169 VTVREGVSQDEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDM 210


>gi|289423922|ref|ZP_06425715.1| magnesium transporter [Peptostreptococcus anaerobius 653-L]
 gi|289155699|gb|EFD04371.1| magnesium transporter [Peptostreptococcus anaerobius 653-L]
          Length = 459

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 4/83 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VVD  QKL G+++  D+F    KD +T+  ED+M++N K + ++     A++++ ++N
Sbjct: 174 IYVVDNEQKLVGVLSLRDLF--ISKDSSTM--EDIMVENVKSVKDNEDREEAVKMVSKYN 229

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           +  + VVD+     GI+   D+L
Sbjct: 230 LVAIPVVDEEGVLKGIITVDDIL 252


>gi|297527119|ref|YP_003669143.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
 gi|297256035|gb|ADI32244.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
          Length = 316

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 20/134 (14%)

Query: 218 VCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V  +DVM S    P+V I  G  + +A+  + +  F  + VV E   L GIIT  DI R 
Sbjct: 181 VKVADVMSS----PVVAIETGKSIKEAMEKIIKYGFRRIPVVGENVVL-GIITAMDIVRY 235

Query: 276 F--HKDL-NTLS----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           F  H+   NT+S          V+D+M++   V+  D  L +    + + N+   +VV+D
Sbjct: 236 FGTHEAFKNTVSGDIREALRIPVDDIMVRELVVVKPDDDLGLVAHKMAEKNVGSALVVND 295

Query: 323 CQKAIGIVHFLDLL 336
             + +GIV   D+L
Sbjct: 296 KMELLGIVTERDIL 309


>gi|196002603|ref|XP_002111169.1| hypothetical protein TRIADDRAFT_50086 [Trichoplax adhaerens]
 gi|190587120|gb|EDV27173.1| hypothetical protein TRIADDRAFT_50086 [Trichoplax adhaerens]
          Length = 291

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 56/123 (45%), Gaps = 9/123 (7%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--------ITEGDIFRNFHKD 279
           +++ +V    PLI A  I+ E+R   + +V+E  K+  I        + EG  + N    
Sbjct: 160 ENVAMVSPDTPLIVAHNIIMERRISALPIVNEAGKVMDIYAKFDALNLAEGRSYNNLDVT 219

Query: 280 L-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   L      ++   V   +  L+  +  L +  +  L+VVD  Q  +GI+   DL++F
Sbjct: 220 VRQALEKRSSTLEGVIVCYPNETLSAVINKLVEKQVHRLIVVDSQQHCMGIISLSDLMKF 279

Query: 339 GII 341
            ++
Sbjct: 280 LVL 282


>gi|171185076|ref|YP_001793995.1| 6-phospho 3-hexuloisomerase [Thermoproteus neutrophilus V24Sta]
 gi|170934288|gb|ACB39549.1| 6-phospho 3-hexuloisomerase [Thermoproteus neutrophilus V24Sta]
          Length = 202

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F   +E I     ++++ G+G+SG +G   A  L   G  S+ +        + G     
Sbjct: 31  FVKTIEDIYRQNKKILVVGVGRSGLVGRAFAMRLRHLGARSYVLGETITPSVEEG----- 85

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           DL++ +S SG++  + A    A++    + A+TS   S +A  AD+VL +P
Sbjct: 86  DLLVAISGSGTTQVVVAAAEAAKKMRAKVAAVTSYYDSPLAKTADLVLYVP 136


>gi|71909801|ref|YP_287388.1| CBS:HPP [Dechloromonas aromatica RCB]
 gi|71849422|gb|AAZ48918.1| CBS:HPP protein [Dechloromonas aromatica RCB]
          Length = 390

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 25/141 (17%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           VCA D+M + D I  V  G  L +A  +L  +    V V+D GQ++ G++T  +  R+  
Sbjct: 231 VCA-DIM-TTDVIS-VNFGTELNEAWALLQTRHLHGVPVIDAGQRVIGVLTLENFLRHVE 287

Query: 278 KD-LNTL--SVEDVMIKNP-------------------KVILEDTLLTVAMQLLRQHNIS 315
            D +  +  ++  ++ K P                   KV  +  L  VA+ LL   + S
Sbjct: 288 PDGVQGIGDNIRRLLRKTPSIYSDKPEVVGQIMSERFMKVQTDTPLGEVAVSLLADEHPS 347

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
           ++ VVD  Q+  G++   DLL
Sbjct: 348 IIPVVDQRQRLAGVLTQTDLL 368


>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
 gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
           vietnamiensis G4]
          Length = 153

 Score = 38.1 bits (87), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DA+ +++EK  G + V+ EG ++ GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKADFVYDAVKLMAEKGIGALLVM-EGDEIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V+++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVDEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLDGG-KLIGLISIGDLVK 127


>gi|332974885|gb|EGK11798.1| acetoin utilization protein AcuB [Desmospora sp. 8437]
          Length = 216

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 51/121 (42%), Gaps = 21/121 (17%)

Query: 171 HGLAPTTS-----------AIMQLAIGDALA-IALLESRNFSENDFYVLHPGGKLGTLFV 218
           H + P+TS            I  L I D    + L+  R+        L  GG    L  
Sbjct: 12  HSVTPSTSIGDAIHLLKRHQIRHLPILDGQNLVGLVTDRDLRGASPSSLDSGGLRDLLHR 71

Query: 219 CASDVMHSGDSIPLVKIGCPLI---DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             S+VM     I  V    PL    DA  +L E R GC+ V+ +G+KL GI+TE DI R 
Sbjct: 72  PVSEVM-----IRQVITAHPLDFVEDAARLLYEHRIGCLPVL-QGEKLVGILTETDILRR 125

Query: 276 F 276
            
Sbjct: 126 L 126


>gi|256544582|ref|ZP_05471954.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus vaginalis ATCC
           51170]
 gi|256399471|gb|EEU13076.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus vaginalis ATCC
           51170]
          Length = 483

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 53/100 (53%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A+ I++  +   V +VD+   LKGI+T  D+   F  D N + ++D+M K   ++ +
Sbjct: 105 LKEALEIMANYKISGVPIVDDNMTLKGILTNRDV--RFQNDEN-VKIDDIMTKEGLIVGQ 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + +  A++ +    +  L +VDD  K  G++   D+ +
Sbjct: 162 VGISMEEAVKKMESGKVEKLPIVDDDFKLKGLITIKDIEK 201


>gi|255326897|ref|ZP_05367973.1| inosine-5'-monophosphate dehydrogenase [Rothia mucilaginosa ATCC
           25296]
 gi|255296114|gb|EET75455.1| inosine-5'-monophosphate dehydrogenase [Rothia mucilaginosa ATCC
           25296]
          Length = 505

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNI 314
           VV E   L+GIIT  DI      D   + V D+M   P V    ++    A  LL  + I
Sbjct: 131 VVSEEGVLEGIITNRDIRYISRSDYEGIRVRDIMTPMPLVTAHPSVTKDEAFALLSNNKI 190

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VDD  K  G++   D ++
Sbjct: 191 ERLPLVDDAGKLAGLITLKDFVK 213


>gi|227824485|ref|ZP_03989317.1| acetoin utilization protein acuB [Acidaminococcus sp. D21]
 gi|226904984|gb|EEH90902.1| acetoin utilization protein acuB [Acidaminococcus sp. D21]
          Length = 222

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 41/96 (42%), Gaps = 12/96 (12%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKD------------LNTLSVEDVMIKNPKVILEDTL 301
           + V D+   L GI+T+GD+ R    D            L  L V D+M K+   + E   
Sbjct: 35  IPVTDKEGLLMGIVTDGDVSRATPSDASVLDRYEANYLLGKLKVSDIMTKSVWTVRESDS 94

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  A  LL  H +  L VVD      GI+   D+ +
Sbjct: 95  VETAAYLLYTHKVGALPVVDGTNHITGIISDTDIFK 130


>gi|157690962|ref|YP_001485424.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           pumilus SAFR-032]
 gi|194017417|ref|ZP_03056028.1| glutamine-fructose-6-phosphate transaminase (isomerizing) [Bacillus
           pumilus ATCC 7061]
 gi|157679720|gb|ABV60864.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Bacillus pumilus SAFR-032]
 gi|194010689|gb|EDW20260.1| glutamine-fructose-6-phosphate transaminase (isomerizing) [Bacillus
           pumilus ATCC 7061]
          Length = 600

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 10/179 (5%)

Query: 16  HSLMKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           H ++K +  Q   +R II E +          G+LS     A    +A   R+ I   G 
Sbjct: 250 HYMLKETDEQPLVMRKIIQEYQ-------DENGKLSVAGDIASAVAEA--DRIYIVACGT 300

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S H G      +         VH A     ++ ++++  L I LS SG + + +A+L   
Sbjct: 301 SYHAGLVGKQYIEDWAKVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETADSRAVLVQV 360

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +      + IT+   S ++  AD  L L   PE         T+ I  LAI  ++A  L
Sbjct: 361 KELGHKALTITNVPGSTLSREADFTLLLHAGPEIAVASTKAYTAQIAVLAILASVAAEL 419


>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
 gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 230

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 55/122 (45%), Gaps = 26/122 (21%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----------RNFHKDL--------- 280
           +A   L+EK    + VVD+  +L G++TEGD+            R +  D          
Sbjct: 22  EAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLASTRELAS 81

Query: 281 -----NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                ++  V D+M  +   + EDT ++   +LL +H I  + VV D  K  G+V   +L
Sbjct: 82  EYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVVKDG-KVTGLVSRANL 140

Query: 336 LR 337
           +R
Sbjct: 141 IR 142


>gi|186470844|ref|YP_001862162.1| signal transduction protein [Burkholderia phymatum STM815]
 gi|184197153|gb|ACC75116.1| putative signal transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 193

 Score = 37.7 bits (86), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKV 295
           LI A   L +KR GC+ V D G+ L G++T  DI        ++L  ++  +VM      
Sbjct: 19  LIAAARKLRDKRIGCLPVCDGGRAL-GVLTGRDIAVRATAQGRNLTDMTAREVMSVGALC 77

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D  +  A+QL+ Q ++  L+V+    + +G++   D+
Sbjct: 78  CSLDDTVERAVQLMEQFHVRRLVVLSGETRVVGVISASDI 117


>gi|240102779|ref|YP_002959088.1| hypothetical protein TGAM_0722 [Thermococcus gammatolerans EJ3]
 gi|239910333|gb|ACS33224.1| Conserved hypothetical protein, containing 2 CBS-domains
           [Thermococcus gammatolerans EJ3]
          Length = 136

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%), Gaps = 3/94 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLL 302
           I++E   G + VVDE   + G +T+GDI R        NT  V ++M KN   +  +T L
Sbjct: 30  IMTEFDIGSLVVVDENGDVVGFLTKGDIIRRLVVPGLPNTTPVREIMTKNLVTVPAETPL 89

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + ++ +  +  ++ +++  K +GI    DLL
Sbjct: 90  QDVLDVMAKKGLKHIL-IEENGKIVGIFSITDLL 122


>gi|114328016|ref|YP_745173.1| CBS domain-containing protein [Granulibacter bethesdensis CGDNIH1]
 gi|114316190|gb|ABI62250.1| CBS domain containing protein [Granulibacter bethesdensis CGDNIH1]
          Length = 144

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 4/95 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTL 301
           +LS+KR G V V+    +++GI++E D+ R   N+      L+ E +M +  +    +  
Sbjct: 29  LLSDKRIGAVPVLGAEGEIRGIVSERDLVRAMANYGVKALELTAEQMMTRGIRTASAEMT 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  AM+ +       L VV++  + IGIV   D++
Sbjct: 89  VEAAMETMTTGRFRHLPVVEEG-RLIGIVSIGDVV 122


>gi|15899455|ref|NP_344060.1| hypothetical protein SSO2740 [Sulfolobus solfataricus P2]
 gi|284174298|ref|ZP_06388267.1| hypothetical protein Ssol98_06517 [Sulfolobus solfataricus 98/2]
 gi|13816068|gb|AAK42850.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601225|gb|ACX90828.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 250

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ++DA  ++       + V  +  +L GIIT  DI +   K+ N   V D   KNP  I  
Sbjct: 147 IMDAAKLMVMNNVRRLPVFSKDNRLVGIITAADIVKYLAKNKNIGKVLDAGTKNPITINR 206

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  A +L+ +  I  L+V+++ QK +GIV   DL+
Sbjct: 207 YYSILNAAKLMIEKRIGTLLVMEN-QKLVGIVTERDLM 243


>gi|298676141|ref|YP_003727890.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Methanohalobium evestigatum Z-7303]
 gi|298289129|gb|ADI75094.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Methanohalobium evestigatum Z-7303]
          Length = 609

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 1/71 (1%)

Query: 98  AAEASHGDLGMITRDDLIIVLSWSG-SSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           A E  HG L +IT D  ++ ++ SG + D++ + +   +  +  +IA+  E+ + +  + 
Sbjct: 500 AGELKHGPLALITEDTPVVAIATSGHTYDKIISNIMEVKARNATVIAVAEEDDNEIEKYV 559

Query: 157 DIVLTLPKEPE 167
           D+VL +PK  E
Sbjct: 560 DLVLRIPKTDE 570


>gi|238621002|ref|YP_002915828.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|238382072|gb|ACR43160.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
          Length = 250

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V +S+V+  G+          +++A  +++      + V  +  KL GIIT  DI +   
Sbjct: 133 VMSSNVVSIGEE-------STILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADIVKYLA 185

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+ N   V D   KNP  I     +  A +L+ +  I  L V+++ QK +GIV   DL+
Sbjct: 186 KNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMEN-QKLVGIVTERDLM 243


>gi|116749507|ref|YP_846194.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698571|gb|ABK17759.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 202

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILED 299
           +A+ ++ +     + VVD+  KL G +T+ D+        L  L++EDVMI+ P  +  D
Sbjct: 22  EALAVMKQGSIRHLPVVDQDGKLLGWVTDADLRGVLIASMLEELTLEDVMIRRPFTVTPD 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L  A  L+    I  L VV + +K  G++  +D+L
Sbjct: 82  MSLEEASHLILDKRIGGLPVV-EGEKLTGVITTVDIL 117


>gi|282165223|ref|YP_003357608.1| peptidase M50 family protein [Methanocella paludicola SANAE]
 gi|282157537|dbj|BAI62625.1| peptidase M50 family protein [Methanocella paludicola SANAE]
          Length = 373

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +G  +  AI T+   K  G   V  E  K+ GI+T  D+ R   +   T  V D+M +N 
Sbjct: 256 VGTTVAQAIDTMFRLKHLGYPVV--EAGKMVGIVTLNDVSRVPVEARATTPVRDIMTRNV 313

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D     A+Q L  + I  L+V+D  Q A GIV   D+L+
Sbjct: 314 ITLKPDDDAFTALQKLSTNKIGRLVVMDGGQMA-GIVSRTDMLK 356


>gi|257875575|ref|ZP_05655228.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC20]
 gi|257809741|gb|EEV38561.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus EC20]
          Length = 603

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 35/144 (24%), Positives = 63/144 (43%), Gaps = 4/144 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G    + L         VH +     ++ +++ +   + LS SG + 
Sbjct: 293 RIYIIACGTSNHAGWAAKAILEKLTQIPVEVHLSSEFGYNMPLLSANPFFLFLSQSGETA 352

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    +  +P + IT+   S ++  A+  L L   PE     +A T +   Q+A+
Sbjct: 353 DSRQVLVTINQLGLPSLTITNVAGSTLSREANHTLLLHAGPEIA---VASTKAYTAQIAV 409

Query: 186 GDALAIALLESRNFSEN-DFYVLH 208
              LA A+ + +   E  DF V H
Sbjct: 410 MTLLAKAIGDEKAVPEALDFDVFH 433


>gi|302875709|ref|YP_003844342.1| transcriptional regulator, RpiR family [Clostridium cellulovorans
           743B]
 gi|307689141|ref|ZP_07631587.1| transcriptional regulator, RpiR family protein [Clostridium
           cellulovorans 743B]
 gi|302578566|gb|ADL52578.1| transcriptional regulator, RpiR family [Clostridium cellulovorans
           743B]
          Length = 252

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 6/164 (3%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           LE  + G+L    + A + I   +  V+  GIG SGH     A  L+S G   F ++  +
Sbjct: 91  LERVVNGDLDDAMNKAAKLIHE-QENVLFIGIGNSGHSSGYGARYLSSLG--KFALYIDD 147

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +   G I ++ + I +S SG SD +  +    +     +I++T+   S ++  AD+ +
Sbjct: 148 PYYPLTGDIIKNSVTIAISVSGESDSILRLTNIFKERGSKIISVTNRKSSPLSKMADVNI 207

Query: 161 TLPKEPES-CPHGLA--PTTSAIMQLAIGDALAIALLESRNFSE 201
           +   + ES   +GL     TS +  + I + +A  + E  N  E
Sbjct: 208 SYYIQQESFADNGLEYRDITSQVPSIFIVETIAKKVHELMNNRE 251


>gi|257065668|ref|YP_003151924.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
 gi|256797548|gb|ACV28203.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
          Length = 243

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD--DLIIVLSWSG 122
           GR+ + GIG SG   ++        G  +   +A E    +L   + D  DL+I +S SG
Sbjct: 116 GRIAVIGIGSSGLCANEFVYKFGEIGLNNT-DYAKEPYSINLLTKSLDAKDLLIAISLSG 174

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            ++ L   + +A+  +  ++AIT  N+S +   A   + LP  P
Sbjct: 175 ENNNLLEGVRFAKDKNANILAITGNNESTLKNIATNTILLPPYP 218


>gi|255540203|ref|XP_002511166.1| conserved hypothetical protein [Ricinus communis]
 gi|223550281|gb|EEF51768.1| conserved hypothetical protein [Ricinus communis]
          Length = 545

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVIL 297
           +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM +NP  +L
Sbjct: 74  EACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPVFVL 133

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 134 SDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 169


>gi|262197635|ref|YP_003268844.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
           14365]
 gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
           14365]
          Length = 640

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 8/105 (7%)

Query: 239 LID-AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------VEDVMIK 291
           L+D A +++  +    V V D+   L GIIT   + R   +    L+      V D+M  
Sbjct: 522 LVDLAASVMDWEHIRHVPVEDDHGSLVGIITHRTLLRLMARRGTNLAASSPVAVRDIMRV 581

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            P  +  DTL   A++++R+  I  L VV D  K +GI+   DLL
Sbjct: 582 APVTVSPDTLTIDAIRMMREQKIGCLPVV-DGDKLVGIITESDLL 625


>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
           [Chthoniobacter flavus Ellin428]
 gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
           [Chthoniobacter flavus Ellin428]
          Length = 146

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +K    + +AI +++EK  G + VVD G +L GI+TE D  R      K     SV  +M
Sbjct: 21  IKPDATVYEAIELMAEKNIGALPVVDRG-RLLGILTERDYARKVILEGKSSKDTSVSAIM 79

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            ++P  +     +   M+++    +  L V++     +GI+   D++R+ I
Sbjct: 80  SRSPITVTPADTVGECMRIMTDKRVRHLPVMEGGD-FVGILSIGDVVRWMI 129


>gi|118431653|ref|NP_148269.2| 6-phospho-3-hexuloisomerase [Aeropyrum pernix K1]
 gi|152031733|sp|Q9YAK0|Y1940_AERPE RecName: Full=Uncharacterized protein APE_1940.1
 gi|116062976|dbj|BAA80949.2| 6-phospho-3-hexuloisomerase [Aeropyrum pernix K1]
          Length = 212

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 5/118 (4%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +F   +E++   K +V++ G G+SG +G   A  L   G  S+ +            +  
Sbjct: 41  RFVGELERVYREKRKVLVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVPS-----VRE 95

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            DL++ +S SG +  +      A++    + AIT+   S +   +DIV+ +P   +S 
Sbjct: 96  GDLVVAISGSGRTKVIVTAAETAKQVGATVAAITTYPDSPLGRLSDIVVRVPGRTKSS 153


>gi|59710752|ref|YP_203528.1| mannose-1-phosphate guanyltransferase [Vibrio fischeri ES114]
 gi|59478853|gb|AAW84640.1| mannose-1-phosphate guanyltransferase [Vibrio fischeri ES114]
          Length = 352

 Score = 37.7 bits (86), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 7/66 (10%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE----D 287
           L+K    ++DA+ ++  +      VV++ Q+L G++T+GDI R     LN L +E    D
Sbjct: 9   LIKPESTVVDALRVIDNEALRIALVVNDEQQLLGVVTDGDIRRGL---LNNLPLETPVVD 65

Query: 288 VMIKNP 293
           +M ++P
Sbjct: 66  IMSRSP 71


>gi|300937494|ref|ZP_07152318.1| SIS domain protein [Escherichia coli MS 21-1]
 gi|300457468|gb|EFK20961.1| SIS domain protein [Escherichia coli MS 21-1]
          Length = 292

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E    G  PT
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDEK---GKTPT 251


>gi|290955592|ref|YP_003486774.1| CBS domain protein [Streptomyces scabiei 87.22]
 gi|260645118|emb|CBG68204.1| putative CBS domain protein [Streptomyces scabiei 87.22]
          Length = 226

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 65/139 (46%), Gaps = 28/139 (20%)

Query: 221 SDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----F 273
           SDVM    S+P V +    P  D +  +++++   V VV+   ++ G+++E D+     F
Sbjct: 11  SDVM----SLPAVAVRRDTPFKDIVRAMTDRQVSAVPVVEGDGRVVGVVSEADLLPKEEF 66

Query: 274 RNFHKDLN---------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           R+  +DL                 ++ E+VM     V   D  L  A +++  + +  L 
Sbjct: 67  RD--RDLTRAEQLRRMSDLAKAGAVTAEEVMSAPAIVAHPDVTLAQAARIMAVNRVKRLP 124

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+DD  + +G+V   DLL+
Sbjct: 125 VIDDEGRLLGVVSRGDLLK 143


>gi|229190348|ref|ZP_04317349.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|228593132|gb|EEK50950.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10876]
          Length = 284

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLTQLSLLDTLYVGL 260


>gi|255943181|ref|XP_002562359.1| Pc18g05320 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587092|emb|CAP94756.1| Pc18g05320 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 546

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 42/90 (46%), Gaps = 6/90 (6%)

Query: 251 FGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           FG   V + G    KL G++T  DI   FH DLN   V  VM  +       T LT A Q
Sbjct: 160 FGGFPVTENGTLKSKLVGMVTSRDI--QFHTDLNE-PVTAVMATDLVTAPAGTTLTEANQ 216

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +LRQ     L +VD     + ++   DL++
Sbjct: 217 VLRQSKKGKLPIVDANGNIVSLLSRSDLMK 246


>gi|114707817|ref|ZP_01440711.1| inositol-5-monophosphate dehydrogenase [Fulvimarina pelagi
           HTCC2506]
 gi|114536806|gb|EAU39936.1| inositol-5-monophosphate dehydrogenase [Fulvimarina pelagi
           HTCC2506]
          Length = 500

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 78/178 (43%), Gaps = 30/178 (16%)

Query: 175 PTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           P  SA M      ALAIA+ ++       RNF+  +              V       SG
Sbjct: 48  PILSAAMDTVTESALAIAVAQAGGIGVIHRNFTPVEQ----------AEQVRQVKKFESG 97

Query: 228 DSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHK 278
             +  V IG    L DA  ++++ R   + VV++G        KL GI+T  D+   F  
Sbjct: 98  MVVNPVTIGPEATLGDARALMAQHRISGIPVVEKGNNGGTALGKLVGILTNRDV--RFAS 155

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D +   + ++M K+  V + +++    A +LL QH I  L+V D+    IG++   D+
Sbjct: 156 D-DGQPIHELMTKDDLVTVNESVTQKEAKRLLHQHRIEKLLVTDNQGFCIGLITVKDI 212


>gi|150390292|ref|YP_001320341.1| polynucleotide adenylyltransferase region [Alkaliphilus
           metalliredigens QYMF]
 gi|149950154|gb|ABR48682.1| Polynucleotide adenylyltransferase region [Alkaliphilus
           metalliredigens QYMF]
          Length = 875

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 2/89 (2%)

Query: 250 RFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           R+G   + V EG ++ GII+  D+ +     L    V+  M KN K I   T L     L
Sbjct: 335 RYGHTGMPVLEGDQMIGIISRTDVDKAIIHGLGHAPVKGFMTKNVKTINPSTTLKEMNLL 394

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++NI  L VV+D Q  IGIV   D+L+
Sbjct: 395 LTRNNIGRLPVVEDNQ-LIGIVTRTDVLK 422


>gi|332993851|gb|AEF03906.1| CBS domain-containing membrane protein [Alteromonas sp. SN2]
          Length = 134

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 60/127 (47%), Gaps = 22/127 (17%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           +H  DS+ L++         T+ +E  F  + VV + Q L+GII++ D+ +      NT+
Sbjct: 8   VHMDDSLELIQ---------TLFAETGFHHLVVVHQNQ-LQGIISDRDVLKATSPFANTV 57

Query: 284 S------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +               +M +N   +     +  A+ L   + IS + ++D+ +  +GIV 
Sbjct: 58  NERFRDKATLEKKAHQIMTRNVLTLSASDSIVSAISLFNDNKISCIPIIDEKRCPVGIVS 117

Query: 332 FLDLLRF 338
           + D++RF
Sbjct: 118 WRDVMRF 124


>gi|296125463|ref|YP_003632715.1| diguanylate cyclase [Brachyspira murdochii DSM 12563]
 gi|296017279|gb|ADG70516.1| diguanylate cyclase [Brachyspira murdochii DSM 12563]
          Length = 342

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 62/119 (52%), Gaps = 11/119 (9%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + I ++K    L++ ++I S+     +AVV++  K+ G+I   +I  N  KD++  S ++
Sbjct: 12  NRIGVIKKDSNLLELVSIASKSSNKILAVVNDSDKIVGVINCDNILVNVLKDISKKSSKN 71

Query: 288 VMIK-------NPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +I        N  +I+   ED +L +   +++ + I  L++++     IG+V+  DL 
Sbjct: 72  AVINKEVSAFMNKNLIIAHPEDDIL-MTFDIMKDNKIDYLVIINSDNYPIGVVNIYDLF 129


>gi|227831543|ref|YP_002833323.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580496|ref|YP_002838896.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|284999095|ref|YP_003420863.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457991|gb|ACP36678.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228011212|gb|ACP46974.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|284446991|gb|ADB88493.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323475806|gb|ADX86412.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478620|gb|ADX83858.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 250

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V +S+V+  G+          +++A  +++      + V  +  KL GIIT  DI +   
Sbjct: 133 VMSSNVVSIGEE-------STILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADIVKYLA 185

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+ N   V D   KNP  I     +  A +L+ +  I  L V+++ QK +GIV   DL+
Sbjct: 186 KNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMEN-QKLVGIVTERDLM 243


>gi|254383108|ref|ZP_04998462.1| inosine 5' monophosphate dehydrogenase [Streptomyces sp. Mg1]
 gi|194342007|gb|EDX22973.1| inosine 5' monophosphate dehydrogenase [Streptomyces sp. Mg1]
          Length = 502

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 115 LREADELCAKFRISGVPVTDAAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 171

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VD+     G++   D ++
Sbjct: 172 VGISGVDAMELLRRHKIEKLPLVDEAGLLKGLITVKDFVK 211


>gi|330799688|ref|XP_003287874.1| hypothetical protein DICPUDRAFT_78725 [Dictyostelium purpureum]
 gi|325082077|gb|EGC35571.1| hypothetical protein DICPUDRAFT_78725 [Dictyostelium purpureum]
          Length = 356

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 17/114 (14%)

Query: 240 IDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDIFRNFHKD----LNTLSVE 286
           IDA  IL  K    +AVVD           + LK I T+G  F   +K     L  L  +
Sbjct: 238 IDAFKILENKDVNGIAVVDGNGALIDNLSARDLKAIATDGAFFWKLYKPVEEFLGYLKTD 297

Query: 287 DVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
            V +  ++ + ILE      A+  +  ++I  L +VD  + +K IG++   DLL
Sbjct: 298 SVTVRPRHAQFILESDTFETALTKIFTNSIHRLFIVDSLETKKPIGVISLSDLL 351


>gi|282860881|ref|ZP_06269947.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. ACTE]
 gi|282564617|gb|EFB70153.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. ACTE]
          Length = 500

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D     V +VM   P V   
Sbjct: 114 LGEADALCAKFRISGVPVTDSAGKLLGIVTNRDMA--FESD-RARQVREVMTPMPLVTGR 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  V AM+LLR+H I  L +VDD     G++   D 
Sbjct: 171 VGISGVDAMELLRRHKIEKLPLVDDAGILKGLITVKDF 208


>gi|298528247|ref|ZP_07015651.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511899|gb|EFI35801.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 774

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI----KNPKVI 296
           DAI  L ++    V VVD+  KL GI TE D+   ++K     S +D  +    +   + 
Sbjct: 668 DAIRTLHDRNVSSVFVVDDNAKLIGIFTERDVVHCYNK---GFSCQDTPVGHVARKDLIK 724

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E ++   +  L+   N    M + D  + +G+V F DL+ +
Sbjct: 725 FEPSMGISSAILIASRNKKRHMPIVDGDRILGMVTFRDLVSY 766


>gi|225390463|ref|ZP_03760187.1| hypothetical protein CLOSTASPAR_04217 [Clostridium asparagiforme
           DSM 15981]
 gi|225043474|gb|EEG53720.1| hypothetical protein CLOSTASPAR_04217 [Clostridium asparagiforme
           DSM 15981]
          Length = 282

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 65/138 (47%), Gaps = 3/138 (2%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VEKI   + R+V+ G+G SG I   L   L   G  +   +     +     + ++ ++I
Sbjct: 125 VEKIAGAR-RIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLDQNTILI 183

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           + S SG S E+  +   A+     + A+TS  KS +A  A  +L      E+     A  
Sbjct: 184 LFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLC-SSSRETMFRSDA-M 241

Query: 177 TSAIMQLAIGDALAIALL 194
           TS I+Q+ I D L ++L+
Sbjct: 242 TSRIVQMVIIDILYVSLV 259


>gi|315230430|ref|YP_004070866.1| glucosamine--fructose-6-phosphate aminotransferase [Thermococcus
           barophilus MP]
 gi|315183458|gb|ADT83643.1| glucosamine--fructose-6-phosphate aminotransferase [Thermococcus
           barophilus MP]
          Length = 602

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 51/97 (52%), Gaps = 3/97 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +I RD L+I ++ SG + +  A +  A++    +++I +   S+    +D+VL     PE
Sbjct: 332 LIDRDTLVIAITQSGETADTLAAIKLAKKKGAKVLSIVNVVGSMATRLSDLVLYTHAGPE 391

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
               G+A T +   QL +   LAIAL +  N ++ ++
Sbjct: 392 I---GVAATKTYTTQLTVISMLAIALAKYLNTADREY 425


>gi|315185925|gb|EFU19690.1| sodium/hydrogen exchanger [Spirochaeta thermophila DSM 6578]
          Length = 557

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 18/138 (13%)

Query: 207 LHPGGKLGTLFVCASDVM---HSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDE 259
           L   G+ G L V   D++      D +P  +   P    L + + + +E  +   AVVD 
Sbjct: 404 LEKAGEAG-LNVTEEDILTRHRVADVLPADRAVVPNTIRLSELLRLYAEHDWNVWAVVDA 462

Query: 260 GQKLKGIITEGDIFRNFHKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             + +G++     F N  + L        +  ED++   P+ +   T L  A++++R+ N
Sbjct: 463 EDRYRGVVG----FENLREALAEPELQEFVIAEDILTPFPETVHPHTPLHEALRIMRRRN 518

Query: 314 ISVLMVVDDCQKAIGIVH 331
           +  L V+DD    +GI+ 
Sbjct: 519 VDFLPVLDDRGHVLGILE 536


>gi|301067705|ref|YP_003789728.1| RpiR family transcriptional regulator [Lactobacillus casei str.
           Zhang]
 gi|300440112|gb|ADK19878.1| transcriptional regulator, RpiR family [Lactobacillus casei str.
           Zhang]
          Length = 246

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 57/118 (48%), Gaps = 19/118 (16%)

Query: 58  EKIKAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH------GDLGMIT 110
           ++I A++ R + +   G SG IG+ +       G   FF    +++        DLG   
Sbjct: 106 QRIAAVEDRYLYVYAAGFSGVIGNYMFKKFQILGKRCFFSTPGDSAALLENYLEDLG--- 162

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKE 165
              L +V+S SG   E +++L  AR  S   IP++A T   +S +A  AD  LT+P E
Sbjct: 163 ---LFLVVSKSG---ETQSVLDKARLVSSLPIPIVAFTGNPESTLAKIADWTLTVPDE 214


>gi|293363640|ref|ZP_06610392.1| SIS domain protein [Mycoplasma alligatoris A21JP2]
 gi|292552796|gb|EFF41554.1| SIS domain protein [Mycoplasma alligatoris A21JP2]
          Length = 288

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR---DDLIIVLSWSG 122
           R+V+ G G    + S +A+ L + G    F       +  + ++     DD+++V S   
Sbjct: 128 RIVVFGTGLKSSVASNMATELTNIG---LFADLVTNFNNLISIVANCDADDVLMVYSNKV 184

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
           SS E K I  +A+  ++ +I ITS N +     ADI+L+
Sbjct: 185 SSLEYKFISSFAKSRNVKIIVITSMNTTDFDNDADIILS 223


>gi|288817886|ref|YP_003432233.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
 gi|288787285|dbj|BAI69032.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
 gi|308751485|gb|ADO44968.1| Polynucleotide adenylyltransferase region [Hydrogenobacter
           thermophilus TK-6]
          Length = 820

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 2/96 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAI  LS++ F    VVD+  KL G+I +  + R   K      V D M++    +  + 
Sbjct: 319 DAILELSQRNFAGAPVVDDAGKLVGVIYKKSLVRAL-KHYPEGRVRDFMLEEFHTLTPED 377

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  A ++L ++   ++ VV +  + +G++  LDLL
Sbjct: 378 FIWKAEEILSRYGEKLIPVV-EGDRLVGVITRLDLL 412



 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L V++VM   P V+ +DT ++ A+  L Q N +   VVDD  K +G+++   L+R
Sbjct: 298 LKVKEVMTSPPFVLHQDTGISDAILELSQRNFAGAPVVDDAGKLVGVIYKKSLVR 352


>gi|238786279|ref|ZP_04630222.1| Transcriptional regulator, RpiR family [Yersinia bercovieri ATCC
           43970]
 gi|238712823|gb|EEQ04892.1| Transcriptional regulator, RpiR family [Yersinia bercovieri ATCC
           43970]
          Length = 246

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 8/108 (7%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A   R++  GIG SG +G   A   ++ G   F  +  +  +     + +D + I+LS S
Sbjct: 109 AASNRIIFVGIGTSGALGKYSARFFSNIG--KFSTYIDDPYYPINSDMYQDAIAIILSVS 166

Query: 122 GSSDELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           G ++E+  I   A +FS+    +I++T+   S +A  AD+ ++    P
Sbjct: 167 GETEEIIRI---ANQFSLHKCKIISLTNSENSTLAKMADLNISYHMPP 211


>gi|238759688|ref|ZP_04620848.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           aldovae ATCC 35236]
 gi|238702116|gb|EEP94673.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           aldovae ATCC 35236]
          Length = 280

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 39/145 (26%), Positives = 73/145 (50%), Gaps = 13/145 (8%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITR--- 111
           A+E ++  + +V++ GIG SG +   LA  L   G     V  +E   H  L ++     
Sbjct: 123 ALEMLRTAR-KVILIGIGASGLVAKDLAYKLLKIG----VVAVSETDMHVQLAVVQALNV 177

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCP 170
            DL++ +S+SG   E+      A+R    ++A+TS + + +   AD  L T+ +EP    
Sbjct: 178 QDLVLAISFSGERREVNLAAEEAQRRGAKVLALTSFSPNNLQQRADHCLYTISEEPVIRS 237

Query: 171 HGLAPTTSAIMQLAIGDALAIALLE 195
             ++ +T+   Q A+ D L +A+++
Sbjct: 238 AAISSSTA---QYALTDLLFMAMIQ 259


>gi|218133508|ref|ZP_03462312.1| hypothetical protein BACPEC_01375 [Bacteroides pectinophilus ATCC
           43243]
 gi|217990883|gb|EEC56889.1| hypothetical protein BACPEC_01375 [Bacteroides pectinophilus ATCC
           43243]
          Length = 635

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 3/86 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +IT  DL+IV+S SG + +  A+L  A+      +A+ +   S +A  AD V+     PE
Sbjct: 363 LITDKDLVIVISQSGETADTLAVLKLAKEMKAATLAVVNVKGSSIAREADHVIYTHAGPE 422

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIAL 193
                +A T + ++Q+A+   +A AL
Sbjct: 423 I---SVASTKAYMVQVAVMYLIAFAL 445


>gi|152980858|ref|YP_001353867.1| hypothetical protein mma_2177 [Janthinobacterium sp. Marseille]
 gi|151280935|gb|ABR89345.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 176

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNP 293
            P++DA+  ++EK  G + V++ G  L G++T  ++    H +   + + SV   M K+P
Sbjct: 46  SPMLDAVNAMAEKDIGSLVVMEAGN-LIGMLTFREVMATIHANGGAVGSDSVRRYMDKHP 104

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I  D  +    +L+ + +   + V+ D +  +G++ F D+ +
Sbjct: 105 MTITSDAEINEVRRLMLEKHARYVPVL-DGKILVGVISFYDVAK 147


>gi|119871770|ref|YP_929777.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673178|gb|ABL87434.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 136

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 5/96 (5%)

Query: 246 LSEKRFGCVAVV--DEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL 301
           ++E   G V V+   + +K  GIITE DI +  + H  L+T  VE         I E+  
Sbjct: 32  MAENNIGAVVVISPQDPKKPVGIITERDIVKAVSMHMPLST-PVEAFATNRLITIDENET 90

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  A +L+  +NI  L+VVD+  +  G++   D+L+
Sbjct: 91  VEKAAELMLMYNIRHLVVVDNVGRLRGVISIRDVLK 126


>gi|91217847|ref|ZP_01254802.1| CBS domain protein [Psychroflexus torquis ATCC 700755]
 gi|91184048|gb|EAS70436.1| CBS domain protein [Psychroflexus torquis ATCC 700755]
          Length = 157

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 7/105 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVEDVMIKN 292
           +I+ + IL + R     VVD+ +++ GII+EGD        R ++  +  +SVE  M K 
Sbjct: 40  IIEVVEILIKFRVSGGPVVDDQKRVIGIISEGDCVKQISESRYYNMPMEDVSVEKYMSKE 99

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I  D  L  A  L  +       VV++  + IGIV   D+LR
Sbjct: 100 VNTISPDVSLFDAANLFLKSKRRRFPVVEN-DRIIGIVSQKDILR 143


>gi|83589982|ref|YP_429991.1| signal transduction protein [Moorella thermoacetica ATCC 39073]
 gi|83572896|gb|ABC19448.1| putative signal transduction protein with CBS domains [Moorella
           thermoacetica ATCC 39073]
          Length = 151

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 2/57 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            + A D+M +   + +V    P+ D + +  EK   C  VVD+  KL+GI+T+GDI 
Sbjct: 1   MILARDIMTT--DVVVVHPEDPVGDVVKLFLEKGITCAVVVDQKGKLQGIVTDGDIM 55


>gi|330507965|ref|YP_004384393.1| CBS domain pair protein [Methanosaeta concilii GP-6]
 gi|328928773|gb|AEB68575.1| CBS domain pair protein [Methanosaeta concilii GP-6]
          Length = 259

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 33/54 (61%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VED+  ++P  + + T LT A QL+R +++  L VVD   + +G++   D+LR 
Sbjct: 3   VEDIFSRDPLYVEDSTYLTKARQLIRDNHVRGLPVVDSRVQVLGVITSQDVLRI 56


>gi|327396111|dbj|BAK13533.1| hypothetical protein YfeU [Pantoea ananatis AJ13355]
          Length = 296

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 59/137 (43%), Gaps = 25/137 (18%)

Query: 56  AVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFV-------HAA----- 99
           AVE I A     GR+V  G G SG +G   AS    T GTP   V       H A     
Sbjct: 46  AVEAICAAFSAGGRLVYCGAGTSGRLGILDASECPPTFGTPRDQVIGLIAGGHQAILQAV 105

Query: 100 -------EASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
                  E    DL  I  +R D+++ ++ SG +  +   L YAR+     IA+T    S
Sbjct: 106 ENAEDNVEQGAQDLKAIHFSRHDVLVGIAASGRTPYVLGALDYARQCGASTIALTCNPHS 165

Query: 151 VVACHADIVLTLPKEPE 167
            +A  ADI LT    PE
Sbjct: 166 KMAQVADIALTPVVGPE 182


>gi|294630970|ref|ZP_06709530.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14]
 gi|292834303|gb|EFF92652.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14]
          Length = 500

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R     V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LAEADALCAKFRISGTPVTDPAGKLLGIVTNRDMA--FETD-RSRRVSEVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    AM+LLR+H I  L +VDD     G++   D ++
Sbjct: 171 VGISRADAMELLRRHKIEKLPLVDDAGILRGLITVKDFVK 210


>gi|269960763|ref|ZP_06175134.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834427|gb|EEZ88515.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 620

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 26/78 (33%), Positives = 46/78 (58%), Gaps = 3/78 (3%)

Query: 255 AVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AVV E  K+ G+IT+ D+  R   + ++T   + +VM  +P+ I  D L+  A  ++ QH
Sbjct: 190 AVVYENDKIVGLITDRDMTKRVIAQGVSTDRPISEVMTHDPQTIKPDDLVLHAASMMMQH 249

Query: 313 NISVLMVVDDCQKAIGIV 330
           NI  L +V++  K +G++
Sbjct: 250 NIRNLPLVEN-NKVVGVL 266


>gi|221209916|ref|ZP_03582897.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD1]
 gi|221170604|gb|EEE03070.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD1]
          Length = 399

 Score = 37.7 bits (86), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 31/65 (47%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +  A+ LL +H +  L VVD   +  GIV  
Sbjct: 244 MQAYARTFGQLTCADLMTKNAISIAPSTSIAAALTLLDRHRVKALPVVDADGRLTGIVTR 303

Query: 333 LDLLR 337
            DL R
Sbjct: 304 ADLTR 308


>gi|298377726|ref|ZP_06987677.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|298265429|gb|EFI07091.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
          Length = 497

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 24/164 (14%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SAIMQ   G  LAI L  +   S        EN   ++    K    FV +   +  
Sbjct: 53  PFVSAIMQSVSGPKLAIELARNGGLSFIFGSQPIENQADMVRKVKKFKAGFVISDSNLTP 112

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTL 283
            ++         L D + ++       + V D+G    KL G++T  D +R   KD   +
Sbjct: 113 ENT---------LADVLELVRRTEHSTIGVTDDGTPNGKLLGMVTSRD-YRE-GKDPIDM 161

Query: 284 SVEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQK 325
            V+D M    K+I+ +  +T+  A Q++  H ++ L ++D  QK
Sbjct: 162 KVKDFMTPFAKLIVGELGMTLKEANQIIWDHKLNTLPIIDKDQK 205


>gi|288958934|ref|YP_003449275.1| IMP dehydrogenase [Azospirillum sp. B510]
 gi|288911242|dbj|BAI72731.1| IMP dehydrogenase [Azospirillum sp. B510]
          Length = 492

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 8/102 (7%)

Query: 239 LIDAITILSEKRFGCVAVV---DE--GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++ R   + VV   D+    KL G++T  D+   F  D     V ++M K+ 
Sbjct: 108 LADALQLMADHRISGIPVVASRDQLGSGKLVGMLTNRDV--RFATDPKQ-PVSELMTKDL 164

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E        +LL QH I  L+VVD+  + IG+V   D+
Sbjct: 165 VTVREGVSQEEGKRLLHQHRIEKLLVVDEDYRCIGLVTVKDI 206


>gi|283457606|ref|YP_003362190.1| IMP dehydrogenase/GMP reductase [Rothia mucilaginosa DY-18]
 gi|283133605|dbj|BAI64370.1| IMP dehydrogenase/GMP reductase [Rothia mucilaginosa DY-18]
          Length = 505

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNI 314
           VV E   L+GIIT  DI      D   + V D+M   P V    ++    A  LL  + I
Sbjct: 131 VVSEEGVLEGIITNRDIRYISRSDYEGIRVRDIMTPMPLVTAHPSVTKDEAFALLSHNKI 190

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VDD  K  G++   D ++
Sbjct: 191 ERLPLVDDAGKLAGLITLKDFVK 213


>gi|134103138|ref|YP_001108799.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003919|ref|ZP_06561892.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133915761|emb|CAM05874.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 503

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D   + +  R   V V D    L GIIT  D+   F  D +T  V ++M   P V  +
Sbjct: 116 LSDVDALCARFRISGVPVTDPDGTLVGIITNRDM--RFEVD-HTRKVREIMTSAPLVTAQ 172

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  A+ LLR+H +  L +VD+  K  G++   D ++
Sbjct: 173 VGVTAEAALGLLRRHKVEKLPIVDNAGKLRGLITVKDFVK 212


>gi|149174954|ref|ZP_01853578.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797]
 gi|148846291|gb|EDL60630.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797]
          Length = 494

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           +A  I+  +  G V V   G KL GI+T  D+      D    S+ +VM K+  V   ED
Sbjct: 109 EAAEIMKRRNIGGVPVTKNG-KLVGILTSRDLR---FLDTPDKSISEVMTKDKLVTAKED 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A ++L ++ +  L++VD+  +  G++   D+
Sbjct: 165 TTLEAAQRILLENKVEKLLLVDENYQLKGLITIKDI 200


>gi|20088906|ref|NP_614981.1| hypothetical protein MA0007 [Methanosarcina acetivorans C2A]
 gi|19913749|gb|AAM03461.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 364

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + +  + EK+     VVD G  LKGI+T  DI R    D     V D+M ++   +    
Sbjct: 263 ELVQFMFEKKHMGYPVVD-GGSLKGIVTFTDIQRVSTLDRPVTRVSDIMTRDIISVTSGA 321

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + A++L+   NI  ++V+D+ +  +G++   DL+R
Sbjct: 322 QASDALKLVTARNIGRVLVIDNGE-LVGVLSRTDLVR 357


>gi|317124159|ref|YP_004098271.1| inosine-5'-monophosphate dehydrogenase [Intrasporangium calvum DSM
           43043]
 gi|315588247|gb|ADU47544.1| inosine-5'-monophosphate dehydrogenase [Intrasporangium calvum DSM
           43043]
          Length = 505

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 43/91 (47%), Gaps = 1/91 (1%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAM 306
           E R   + VVD  ++L GI+T  D+     K+  T  V +VM   P +   E      A 
Sbjct: 123 EYRVSGLPVVDGDKRLIGIVTNRDLRFTPVKEWATTRVHEVMTPMPLITGPEGISREDAT 182

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LLRQH    L +VD+    +G++   D ++
Sbjct: 183 LLLRQHKRERLPLVDEQGHLVGLITVKDFVK 213


>gi|302036722|ref|YP_003797044.1| hypothetical protein NIDE1368 [Candidatus Nitrospira defluvii]
 gi|300604786|emb|CBK41118.1| protein of unknown function, contains CBS domains [Candidatus
           Nitrospira defluvii]
          Length = 258

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 5/100 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVIL 297
           +A  +L + R G + +VD+G +  GIIT+ D+ R       D NT +V   M K+   I 
Sbjct: 153 EAGRLLQKWRIGSL-LVDDGSRYIGIITDTDLSRKAVAKGLDPNTTTVLSCMSKSVVTIE 211

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   L  A+ L+++  I  L V +D    IG++   DLLR
Sbjct: 212 DSEPLMEALSLMKKEGIRHLPVTEDG-TIIGVLSVGDLLR 250


>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Microcoleus chthonoplastes PCC
           7420]
          Length = 156

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 33/53 (62%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V +VM ++P  +   T +  AM++L +  IS L+VV+D  K +GI+   DLL
Sbjct: 4   TVAEVMSRDPITVSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLL 56


>gi|169832345|ref|YP_001718327.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639189|gb|ACA60695.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 221

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 58/116 (50%), Gaps = 14/116 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           + +  P+  A+ I++ ++   + V  +G +L G++TE  + +       TLS        
Sbjct: 25  ITLDTPIFQALDIMTRRKVRHLPVF-QGSRLVGLVTERGLLQVSPSPATTLSMHELNYVL 83

Query: 285 ----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V++ ++K+P  +     +  A Q++RQ  I  L+V++D  K +GIV   D++
Sbjct: 84  AKVTVKEALVKDPVWVPPQMPIEEAAQVMRQKKIGSLLVMEDG-KLVGIVSQTDIV 138


>gi|157376487|ref|YP_001475087.1| CBS domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157318861|gb|ABV37959.1| CBS domain containing protein [Shewanella sediminis HAW-EB3]
          Length = 134

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 13/94 (13%)

Query: 256 VVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VEDVMIKNPKVILEDTLLT 303
           +V E  +L+G+++E D  R             +D  TL      VM +NP  I     L 
Sbjct: 38  LVIEDDELQGVLSERDYLRALSPHVGNINETERDSETLQRRAHQVMSRNPVTIAPHKTLN 97

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A +L+ +HNI  L V+    K +GI+ + DLLR
Sbjct: 98  EASRLMLEHNIGSLPVLKRG-KIVGIITWKDLLR 130


>gi|167465591|ref|ZP_02330680.1| inositol-5-monophosphate dehydrogenase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 375

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++++ R   V +V+E  KL GI+T  D+    +F   +  +   D ++  P     
Sbjct: 110 DAEALMAKYRISGVPIVNEQNKLVGILTNRDLRFVHDFSIQIKEVMTHDNLVTAPV---- 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A  +L+QH I  L +VD+  +  G++   D+ +
Sbjct: 166 GTTLEQAEVILQQHKIEKLPLVDEHNELKGLITIKDIEK 204


>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium BAL199]
 gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium BAL199]
          Length = 142

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 16/127 (12%)

Query: 221 SDVMHS-GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           SD++ S G ++       P+ DA  +L+EKR G + ++ E  K+ GI++E DI R    +
Sbjct: 4   SDILKSKGSAVVTAPPSMPVADAARLLAEKRIGSILIL-ERNKVAGILSERDIVRALANE 62

Query: 280 --------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   ++ L    V+   P   + D      MQ++       + VVD+  K  G++ 
Sbjct: 63  GAGCLDGPVSRLMTAKVVTCTPAQTIADV-----MQMMTTGRFRHVPVVDN-GKVAGMIS 116

Query: 332 FLDLLRF 338
             D++++
Sbjct: 117 IGDVVKW 123


>gi|157363265|ref|YP_001470032.1| CBS domain-containing protein [Thermotoga lettingae TMO]
 gi|157313869|gb|ABV32968.1| CBS domain containing protein [Thermotoga lettingae TMO]
          Length = 213

 Score = 37.7 bits (86), Expect = 2.5,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 8/66 (12%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKL    +   DV+H       V    P+ +A  I+++K+ G + V+ E +++ GI+TE 
Sbjct: 73  GKLKIKQIMKKDVIH-------VHPNTPIEEAARIMTDKKIGSLIVL-ENERMVGIVTET 124

Query: 271 DIFRNF 276
           DIF+ F
Sbjct: 125 DIFKVF 130


>gi|326335094|ref|ZP_08201292.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692732|gb|EGD34673.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 492

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 52/202 (25%), Positives = 82/202 (40%), Gaps = 36/202 (17%)

Query: 157 DIVLTLPKEPESCPHGLA-------------PTTSAIMQLAIGDALAIALLESRNFSEND 203
           D VL +P+  E  P  ++             P  SA M      A+AIA+       E  
Sbjct: 16  DDVLLVPQYSEVLPREVSIQSFFSRNISLNVPIVSAAMDTVTESAMAIAIAR-----EGG 70

Query: 204 FYVLHPGGKLGTLFVCASDV-----MHSG---DSIPLVKIGCPLIDAITILSEKRFGCVA 255
             VLH   K  T+   A  V       SG   D + L  +   + DA   + E   G + 
Sbjct: 71  IGVLH---KNMTIEEQAQQVRKVKRAESGMIIDPVTL-SLSSTVGDAKQCMKEHSIGGIP 126

Query: 256 VVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +VD+   LKGI+T  D+   R   + +  +     +I  P    E   +  A ++L ++ 
Sbjct: 127 IVDDQGILKGIVTNRDLRFEREGKRPITQVMTSQYLITAP----EGISMKDAEKILERNK 182

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           I  L VV+   K +G++ F D+
Sbjct: 183 IEKLPVVNKDNKLVGLITFRDI 204


>gi|227828810|ref|YP_002830590.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229586017|ref|YP_002844519.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|227460606|gb|ACP39292.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228021067|gb|ACP56474.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
          Length = 250

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 8/119 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V +S+V+  G+          +++A  +++      + V  +  KL GIIT  DI +   
Sbjct: 133 VMSSNVVSIGEE-------STILEAAKLMAMNNVRRLPVFSKNNKLIGIITAADIVKYLA 185

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+ N   V D   KNP  I     +  A +L+ +  I  L V+++ QK +GIV   DL+
Sbjct: 186 KNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVMEN-QKLVGIVTERDLM 243


>gi|83589609|ref|YP_429618.1| nucleotidyl transferase [Moorella thermoacetica ATCC 39073]
 gi|83572523|gb|ABC19075.1| Nucleotidyl transferase [Moorella thermoacetica ATCC 39073]
          Length = 354

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 7/105 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +K+  P +D   +        + V D  + L GIIT+GDI R   +  +  + V  VM  
Sbjct: 19  LKLALPRMDGAGL------QVLLVGDTERHLLGIITDGDIRRALLRGESLDVPVGQVMQA 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            PKV+     L  A +L+  HNI  + +V++  + + ++ ++DL 
Sbjct: 73  RPKVLPAGVSLDAARRLMLTHNIRHIPLVNNEHQVVDLLLWIDLF 117


>gi|288935045|ref|YP_003439104.1| RpiR family transcriptional regulator [Klebsiella variicola At-22]
 gi|290509107|ref|ZP_06548478.1| SIS domain-containing protein [Klebsiella sp. 1_1_55]
 gi|288889754|gb|ADC58072.1| transcriptional regulator, RpiR family [Klebsiella variicola At-22]
 gi|289778501|gb|EFD86498.1| SIS domain-containing protein [Klebsiella sp. 1_1_55]
          Length = 300

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A   +  G P++ ++    S  + L  + R D++I++      
Sbjct: 146 QVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVLIMMGQKSPH 205

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            E    L  A+R  IP I +T    S  +  A +V+ +P+  +S 
Sbjct: 206 REGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVPRGGDSS 250


>gi|237732547|ref|ZP_04563028.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908086|gb|EEH94004.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 282

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 58/131 (44%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++TGIG SG +    A  L   G  +       A    +  ++ +DL++ +S++G   
Sbjct: 134 RIIVTGIGASGLVAQNFAWKLLKIGFNAVVERDMHALLATVQALSPNDLLLAISYTGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT    + +   A+  L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRTGAKILAITGFTPNALQQRANHCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|300742005|ref|ZP_07072026.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa M567]
 gi|300381190|gb|EFJ77752.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa M567]
          Length = 505

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 1/83 (1%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNI 314
           VV E  KL+GIIT  DI      D     V DVM   P +     L    A  LL ++ I
Sbjct: 131 VVTEDGKLEGIITNRDIRYLSRSDYENTLVRDVMTPMPLITGSPNLTKDEAFALLSKNKI 190

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L ++D+  K  G++   D ++
Sbjct: 191 ERLPLIDEAGKLAGLITLKDFVK 213


>gi|300768979|ref|ZP_07078869.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493391|gb|EFK28569.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 264

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDL 114
           A  ++ A K  V + G+G S  + +         G     +H+ +     +GM T R ++
Sbjct: 121 AASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKA--VIHSQDPHLLAVGMTTQRQNV 178

Query: 115 IIVL-SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++L S SG   E   +   A   +IP+I ++    S +   ADI+L      E+     
Sbjct: 179 VLLLISNSGEKSESIRLANLAHSINIPVIVLSRNATSTLGKLADIILINDDSEENQTARA 238

Query: 174 APTTSAIMQLAIGDAL 189
           A TTS + QL + D L
Sbjct: 239 AATTSLMAQLYVVDLL 254


>gi|110802671|ref|YP_697849.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium perfringens SM101]
 gi|110683172|gb|ABG86542.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium perfringens SM101]
          Length = 378

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 61/121 (50%), Gaps = 7/121 (5%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           F+ A D+M      P+ VK    ++  I I+   +   + V+D+   LKGI+T  DI   
Sbjct: 248 FIKAKDIMIKN---PVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIKIT 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   +  + ++M +NP  + ED  L   + ++ ++++  + VV+  +K +G++    L
Sbjct: 305 NEK---SRVLSEIMSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSL 361

Query: 336 L 336
           L
Sbjct: 362 L 362


>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum nigrificans DSM 574]
 gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum nigrificans DSM 574]
          Length = 148

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 28/120 (23%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDI---------------------------FRNFH 277
           IL++ +   V VVDE  KL GI+TEGD+                           +++  
Sbjct: 26  ILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEANPRIPKFVGILGGILYFGGVDQYKDDF 85

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K L  L   ++M      + +DT +     L+ ++NI  + V  +  K IGIV   D+++
Sbjct: 86  KKLAALKASEIMTSKVITVSKDTDVGTIATLMLENNIKRIPVT-ESGKVIGIVSRADIIK 144


>gi|309776272|ref|ZP_07671261.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915952|gb|EFP61703.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Erysipelotrichaceae bacterium 3_1_53]
          Length = 377

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 8/116 (6%)

Query: 217 FVCASDVM--HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            + ASD+M  H   + P    G  L+ A   +   +   + VVD    L+G+IT   + R
Sbjct: 247 LIRASDIMIRHVITTYP----GVSLVRAYEYMRYNKVDTLMVVDHRHSLQGMIT-ASMIR 301

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              +D N L V+D+MI+      E+  L   MQ  +QH+   + V+D+     G++
Sbjct: 302 RQPRD-NHLLVKDIMIEPAYCAKEEDNLVDVMQKTKQHDFYNVPVLDEQGTLCGLI 356


>gi|237808917|ref|YP_002893357.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187]
 gi|237501178|gb|ACQ93771.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187]
          Length = 487

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 45/168 (26%), Positives = 75/168 (44%), Gaps = 12/168 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-P 231
           P  SA M    G  LAIAL +     F   +  +     K+  +    S ++    ++ P
Sbjct: 43  PMASAAMDTVTGARLAIALAQEGGLGFIHKNMSIEQQADKVRRVKKFESGIVTDPVTVRP 102

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            + I    I  +T +S   FG   VVD    L GIIT  D+   F  DL ++ V +VM  
Sbjct: 103 DMTIAQ--IKELTFMSG--FGGFPVVDTDGSLMGIITGRDV--RFVTDL-SMKVHEVMTP 155

Query: 292 NPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +++   E+    V   L+++H I  +++V+D  K  G++   D  +
Sbjct: 156 KARLVTVHENASREVVQALMQKHRIEKVLIVNDDFKLTGMITVKDFQK 203


>gi|56460285|ref|YP_155566.1| signal protein [Idiomarina loihiensis L2TR]
 gi|56179295|gb|AAV82017.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Idiomarina loihiensis
           L2TR]
          Length = 610

 Score = 37.7 bits (86), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 3/99 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILE 298
           +A  +++      V VVD+ Q L GI+T+ D+      +   L V    VM + P+ + E
Sbjct: 167 EAAKLMASHGISSVLVVDDTQ-LVGILTDRDLRNRVVAEGLPLDVRVSSVMTQLPESVYE 225

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  L  A+  +   NI  L VV+D  + +G+V   DL+R
Sbjct: 226 NRSLMDALTTMTSSNIHHLPVVNDQNQPVGMVTATDLIR 264


>gi|289523011|ref|ZP_06439865.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503554|gb|EFD24718.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 492

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ ++       V +VD   KL GIIT  D+   F  D +   ++DVM K   ++  
Sbjct: 111 LRDAVALMEHYHISGVPIVDADMKLVGIITNRDL--RFITDYDQ-PIKDVMTKENLIVSH 167

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A  +L +H +  L +VD   +  G++   D+++
Sbjct: 168 IGTTLEDAKAILMKHKVEKLPIVDSEGRLKGLITIKDIIK 207


>gi|206580666|ref|YP_002238060.1| SIS domain protein [Klebsiella pneumoniae 342]
 gi|206569724|gb|ACI11500.1| SIS domain protein [Klebsiella pneumoniae 342]
          Length = 300

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A   +  G P++ ++    S  + L  + R D++I++      
Sbjct: 146 QVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVLIMMGQKSPH 205

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            E    L  A+R  IP I +T    S  +  A +V+ +P+  +S 
Sbjct: 206 REGMTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVPRGGDSS 250


>gi|197106135|ref|YP_002131512.1| CBS domain protein [Phenylobacterium zucineum HLK1]
 gi|196479555|gb|ACG79083.1| CBS domain protein [Phenylobacterium zucineum HLK1]
          Length = 139

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 13/95 (13%)

Query: 252 GCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           G + V D G K++G++T+ DI        R+F        V DVM  + +   ED  +T 
Sbjct: 33  GAIPVCD-GDKVRGVVTDRDIVIRAVCEARSFE-----TPVTDVMTADVEYCYEDDDITA 86

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           A   + +  +  L+V+D  Q+ +GIV   D+ + G
Sbjct: 87  AADKMAELQVRRLIVLDHDQRLVGIVSLGDIAQQG 121


>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
 gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
          Length = 142

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVIL 297
           DA+  L++ + G V V   G K+ GI++E DI R       D  +  + D+M        
Sbjct: 25  DAVRFLADNKIGAVVVTGAGGKIAGILSERDIVRAIASRGADALSAPIYDIMTSKVTTCG 84

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E   +   M+L+ +     L V  D  K IGI+   D++R
Sbjct: 85  ESHTVNQVMELMTKGRFRHLPVEADG-KLIGIISIGDVVR 123


>gi|15827114|ref|NP_301377.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium leprae TN]
 gi|221229592|ref|YP_002503008.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium leprae
           Br4923]
 gi|2497359|sp|Q49729|IMDH_MYCLE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|466944|gb|AAC43232.1| guaB2 [Mycobacterium leprae]
 gi|13092662|emb|CAC29895.1| putative inosine-5'-monophosphate dehydrogenase [Mycobacterium
           leprae]
 gi|219932699|emb|CAR70480.1| putative inosine-5'-monophosphate dehydrogenase [Mycobacterium
           leprae Br4923]
          Length = 529

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +   E      A+ L
Sbjct: 153 RISGLPVVDDSGALAGIITNRDM--RFEVD-QSKQVAEVMTKTPLITAAEGVSADAALGL 209

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 210 LRRNKIEKLPVVDGHGRLTGLITVKDFVK 238


>gi|328768526|gb|EGF78572.1| hypothetical protein BATDEDRAFT_12894 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 331

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           ++ A + ++ KR   V VVD   +L GI+T+ D+ +R     LN  T  +  VM KNP  
Sbjct: 30  VLQAASYMAAKRQDAVLVVDNDGELTGILTDKDLAYRVIASRLNPKTTPIVAVMTKNPVS 89

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD 322
           +  DT  + A+  +   +   L VVDD
Sbjct: 90  VGPDTTASDALNKMVAGHFRHLPVVDD 116


>gi|229581716|ref|YP_002840115.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus Y.N.15.51]
 gi|228012432|gb|ACP48193.1| glucosamine/fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus Y.N.15.51]
          Length = 591

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LE+ + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLENAHETVRNIITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|114319424|ref|YP_741107.1| isocitrate dehydrogenase, NADP-dependent [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225818|gb|ABI55617.1| isocitrate dehydrogenase, NADP-dependent [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 586

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL 297
           DA+ ++ EKR   V      +   GI+T+ D+       ++  +T+ VE++  +      
Sbjct: 478 DAMHLMREKRISSVITEPGTEGEWGIMTQRDVLSRIVSKNRTPSTVQVEEIASRPLVTTP 537

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL----RFGI 340
            DT L    +++ + NI  ++V+D+  K +GI+   D+     +FG+
Sbjct: 538 VDTSLHDCAEIMSESNIRRMVVMDNNNKPVGIISDTDIFASVEQFGL 584


>gi|303249048|ref|ZP_07335292.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
 gi|302489571|gb|EFL49512.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
          Length = 130

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 1/102 (0%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DAI ++ E     + + D   +L G++T+ D+    +K     ++ DVM  +   +  
Sbjct: 20  LADAIALMQELFVRHIPITDADGQLAGLVTQRDLLSLENKKDPVTALRDVMCTDLVTVAP 79

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           DT L  A + +  +    L VV+D  + +GI+   D L+  I
Sbjct: 80  DTSLRAAAETMIYNKFGCLPVVED-GRLVGIITETDFLKLAI 120


>gi|30020352|ref|NP_831983.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 14579]
 gi|218232021|ref|YP_002366963.1| transcriptional regulator, RpiR family [Bacillus cereus B4264]
 gi|228952606|ref|ZP_04114682.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229069792|ref|ZP_04203075.1| RpiR family transcriptional regulator [Bacillus cereus F65185]
 gi|229109705|ref|ZP_04239291.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-15]
 gi|229127662|ref|ZP_04256651.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|229144858|ref|ZP_04273255.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|229150488|ref|ZP_04278704.1| RpiR family transcriptional regulator [Bacillus cereus m1550]
 gi|229178633|ref|ZP_04305997.1| RpiR family transcriptional regulator [Bacillus cereus 172560W]
 gi|296502828|ref|YP_003664528.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
 gi|29895903|gb|AAP09184.1| Transcriptional regulator, RpiR family [Bacillus cereus ATCC 14579]
 gi|218159978|gb|ACK59970.1| transcriptional regulator, RpiR family [Bacillus cereus B4264]
 gi|228604791|gb|EEK62248.1| RpiR family transcriptional regulator [Bacillus cereus 172560W]
 gi|228632981|gb|EEK89594.1| RpiR family transcriptional regulator [Bacillus cereus m1550]
 gi|228638580|gb|EEK95013.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|228655739|gb|EEL11588.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|228673746|gb|EEL29004.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-15]
 gi|228713327|gb|EEL65219.1| RpiR family transcriptional regulator [Bacillus cereus F65185]
 gi|228807072|gb|EEM53615.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|296323880|gb|ADH06808.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
          Length = 284

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 143

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILE 298
           A+ +L++ + G + V DE  ++KGI++E D+ R          ++ V +VM    +V  E
Sbjct: 26  AVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVAAQETKAMSMPVAEVMTAKVQVCRE 85

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +   M+++ +      M V++  K +GIV   D+++  I
Sbjct: 86  HHTINQVMEIMTRSRFR-HMPVEEGGKLVGIVSIGDVVKRRI 126


>gi|300775846|ref|ZP_07085706.1| IMP dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300505396|gb|EFK36534.1| IMP dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 486

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 53/98 (54%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  ++S  +   + VVD    L GIIT  D+   + ++L+ + VE++M K   +  +
Sbjct: 109 LGEAKDLMSRYKISGLPVVDADNVLIGIITNRDV--KYQENLD-MKVEEIMTKENLITSD 165

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            DT L  A ++L ++ +  L +VD   K +G++   D+
Sbjct: 166 KDTNLEKAKEILLKNRVEKLPIVDKDNKLVGLITIKDI 203


>gi|71894049|ref|YP_278157.1| transcriptional regulator [Mycoplasma synoviae 53]
 gi|71850837|gb|AAZ43446.1| transcriptional regulator [Mycoplasma synoviae 53]
          Length = 282

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 58/136 (42%), Gaps = 16/136 (11%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-------LGMITRDDLIIVL 118
           R++I G G S  +   L S L       + V     +H D       LG  T +D+ ++ 
Sbjct: 132 RILIHGAGSSKRMAETLVSNL-------YKVSLNVIAHDDFHLFLPVLGNATTEDVCVLF 184

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S + +S E    +   R   + +I ITS+ KS +    D+V+    E  +  H   P +S
Sbjct: 185 SDNLNSPEAAFTIKQCREKKVQIILITSKKKSNLITKNDVVILY--EKITSKHLNIPLSS 242

Query: 179 AIMQLAIGDALAIALL 194
              QL I D L   LL
Sbjct: 243 KWSQLLIADLLFENLL 258


>gi|229017581|ref|ZP_04174476.1| RpiR family transcriptional regulator [Bacillus cereus AH1273]
 gi|229023798|ref|ZP_04180283.1| RpiR family transcriptional regulator [Bacillus cereus AH1272]
 gi|228737483|gb|EEL87993.1| RpiR family transcriptional regulator [Bacillus cereus AH1272]
 gi|228743724|gb|EEL93829.1| RpiR family transcriptional regulator [Bacillus cereus AH1273]
          Length = 284

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A I L T  +E
Sbjct: 176 GLLTKEAVVIAISHSGSNKGLLEALEVAKARGARIIAITSYQKSALSQLAHITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|228958532|ref|ZP_04120252.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229044009|ref|ZP_04191698.1| RpiR family transcriptional regulator [Bacillus cereus AH676]
 gi|228725290|gb|EEL76558.1| RpiR family transcriptional regulator [Bacillus cereus AH676]
 gi|228801159|gb|EEM48056.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 284

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|92118059|ref|YP_577788.1| inosine 5'-monophosphate dehydrogenase [Nitrobacter hamburgensis
           X14]
 gi|91800953|gb|ABE63328.1| inosine-5'-monophosphate dehydrogenase [Nitrobacter hamburgensis
           X14]
          Length = 498

 Score = 37.7 bits (86), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++++  F  + VV+ G      KL GI+T  D+   F  D      E +  +N 
Sbjct: 111 LSDALALMNDHGFSGIPVVNGGSATAPGKLVGILTNRDV--RFATDPRQKVSELMTHENL 168

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVD+  + +G++   D+
Sbjct: 169 VTVREGVSQEEAKKMLHKHRIEKLLVVDEQYRCVGLITVKDM 210


>gi|312880538|ref|ZP_07740338.1| Nucleotidyl transferase [Aminomonas paucivorans DSM 12260]
 gi|310783829|gb|EFQ24227.1| Nucleotidyl transferase [Aminomonas paucivorans DSM 12260]
          Length = 362

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 1/96 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA++++         V D   KL G++T+GD+ R   + ++    V  VM   P+    +
Sbjct: 19  DALSVIDRNSQRMALVADPEGKLLGVVTDGDVRRGILRGVSLDAPVVRVMNPRPQRTRPE 78

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 ++ ++  ++  L+ VD+  +  GIV F D+
Sbjct: 79  EPRFSQLRRMKDLDLPFLVQVDEEDRVAGIVRFADM 114


>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 156

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 39/138 (28%), Positives = 58/138 (42%), Gaps = 35/138 (25%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFH-KDLNTL------ 283
           VK    + DA  IL E R     VVD+  KL G+I+EGDI R    H   LN L      
Sbjct: 15  VKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRLIEVHSPSLNLLMPSPLD 74

Query: 284 -------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                     VE++M      +  D  ++ A +L+ +H+I  L 
Sbjct: 75  LLELPVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVSDAAELMDRHDIKRLP 134

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VV+D  + +GI+   D++
Sbjct: 135 VVED-DELVGIITRGDII 151


>gi|302536318|ref|ZP_07288660.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
 gi|302445213|gb|EFL17029.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
          Length = 503

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 116 LREADELCAKFRISGVPVTDPAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 172

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VD+     G++   D ++
Sbjct: 173 VGISGVDAMELLRRHKIEKLPLVDEAGILKGLITVKDFVK 212


>gi|301118278|ref|XP_002906867.1| myosin-like protein [Phytophthora infestans T30-4]
 gi|262108216|gb|EEY66268.1| myosin-like protein [Phytophthora infestans T30-4]
          Length = 550

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 10/127 (7%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---H 277
           S ++  G  +P++      +DA  ++  ++   V V DE  +  GI T  D+ R      
Sbjct: 210 SAILMEGSEVPVLGPSSTAMDAARMMLIQKTSAVMVCDEAGRTVGIFTSKDLMRRVVASS 269

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLM--VVDDCQKAIGIVHFLD 334
            + N   +  VM  NP+     TL T  ++ L   HN   L   V D+  K +GIV  L 
Sbjct: 270 LEPNQCVLSSVMTPNPQTA---TLGTTILETLHSMHNGKFLHVPVFDNGTKLVGIVDVLQ 326

Query: 335 LLRFGII 341
           + R G+I
Sbjct: 327 VTR-GVI 332


>gi|257871369|ref|ZP_05651022.1| IMP dehydrogenase [Enterococcus gallinarum EG2]
 gi|257805533|gb|EEV34355.1| IMP dehydrogenase [Enterococcus gallinarum EG2]
          Length = 494

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+ R   V +V+  E +KL GIIT  D+   F  D  ++++ DVM K   V   
Sbjct: 112 DAEHLMSKYRISGVPIVETMENRKLVGIITNRDM--RFVTDY-SIAISDVMTKEKLVTAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             T L  A ++L++H I  L +VDD     G++   D+ +
Sbjct: 169 VGTSLKDAEKILQKHKIEKLPIVDDEGILSGLITIKDIEK 208


>gi|224003559|ref|XP_002291451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973227|gb|EED91558.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 298

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 3/99 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           +L+ KR     + D+   + GIIT+ D+ R     H   +   + DVM  NP  +     
Sbjct: 26  MLASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSATPISDVMTANPTCVSMTDS 85

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            T A+  + ++    L V DD    +G++     L   I
Sbjct: 86  ATEALVTMVENRFRHLPVTDDNGAVVGVLDIAKCLNDAI 124


>gi|108761961|ref|YP_631959.1| inosine-5'-monophosphate dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108465841|gb|ABF91026.1| inosine-5'-monophosphate dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 485

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 45/197 (22%), Positives = 83/197 (42%), Gaps = 28/197 (14%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL +P E    P  +  TT     L +   L  A +++   S     +   GG    +
Sbjct: 13  DDVLLVPGESSVVPKDVDLTTRLTRNLRLNIPLLSAAMDTVTESRTAIAMAQEGG----I 68

Query: 217 FVCASDVMHSGDSIPLVKI----GCPLIDAITILSEKRFG------------CVAVVDEG 260
            V   ++     ++ ++K+       ++D +TI  E   G             + VV +G
Sbjct: 69  GVIHKNMTPEQQALEVLKVKKFESGMVVDPVTIEPEAPLGRALELMRLHGVSGIPVV-KG 127

Query: 261 QKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           Q+L GI+T  D+    NF + + ++    ++     +  ED     A +LL +H I  L+
Sbjct: 128 QRLVGIVTSRDVRFETNFTQTVESMMTRKLVTGREGITQED-----AQKLLHEHRIEKLL 182

Query: 319 VVDDCQKAIGIVHFLDL 335
           VV+D  +  G++   D+
Sbjct: 183 VVNDAFELKGLITIKDI 199


>gi|327440916|dbj|BAK17281.1| FOG: CBS domain [Solibacillus silvestris StLB046]
          Length = 215

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 59/107 (55%), Gaps = 7/107 (6%)

Query: 229 SIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           SIP+V      + DAI  +  +  G + V+D+ + L+G+++  D+ R+    +DLN + V
Sbjct: 88  SIPVVVPDDMTVYDAIIHMFSEDVGTLFVIDKDEILQGVLSRKDLLRSSIGTQDLNKMPV 147

Query: 286 EDVMIKNPKV---ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             +M + P +   +  D+L+  A +L+ +  I  + VV++ ++ + I
Sbjct: 148 HIIMTRMPNIAYCVNSDSLIVAAKKLI-EREIDSMPVVEETERGLVI 193


>gi|261213169|ref|ZP_05927452.1| transcriptional regulator RpiR family [Vibrio sp. RC341]
 gi|260837587|gb|EEX64281.1| transcriptional regulator RpiR family [Vibrio sp. RC341]
          Length = 282

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHNQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|228939397|ref|ZP_04101987.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228972276|ref|ZP_04132889.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978890|ref|ZP_04139257.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           Bt407]
 gi|228780847|gb|EEM29058.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           Bt407]
 gi|228787460|gb|EEM35426.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820292|gb|EEM66327.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939968|gb|AEA15864.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 284

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|160901670|ref|YP_001567251.1| signal transduction protein [Petrotoga mobilis SJ95]
 gi|160359314|gb|ABX30928.1| putative signal transduction protein with CBS domains [Petrotoga
           mobilis SJ95]
          Length = 152

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)

Query: 273 FRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           F N  K +    V D MIK P KV  +DT+L VA  ++ ++ + VL VVDD ++ +G++ 
Sbjct: 77  FFNGLKKILDRPVSDFMIKKPFKVYFDDTVLHVA-DVIIKNKLKVLPVVDDNERLVGVIR 135

Query: 332 FLDLL 336
            + LL
Sbjct: 136 RIGLL 140


>gi|301769671|ref|XP_002920263.1| PREDICTED: H(+)/Cl(-) exchange transporter 7-like [Ailuropoda
           melanoleuca]
          Length = 835

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ + + M  +P  + +D  L    +L R   +  L+VVD+C + +G+V   DL R+
Sbjct: 764 TMDLSEFMNPSPYTVPQDASLPRVFKLFRALGLRHLVVVDNCNQVVGLVTRKDLARY 820


>gi|160938096|ref|ZP_02085452.1| hypothetical protein CLOBOL_02990 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438900|gb|EDP16656.1| hypothetical protein CLOBOL_02990 [Clostridium bolteae ATCC
           BAA-613]
          Length = 299

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 56/137 (40%), Gaps = 28/137 (20%)

Query: 64  KGRVVITGIGKSGHIG--------------SKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           KGR++  G G SG +G                +   L + GTP+F V A E +     M 
Sbjct: 63  KGRIIYIGAGTSGRLGVLDAVECPPTFGVSPDVVVGLMAGGTPAF-VRAVEGAEDSQTMG 121

Query: 110 TRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             D         D++I L+ SG +  +   L YA++     +A++    S +   AD+ +
Sbjct: 122 EEDLKEIHLSPADIVIGLAASGRTPYVIYGLRYAKKIGCRTVAVSCNRDSEIGKEADLAI 181

Query: 161 TLPKEPESCPHGLAPTT 177
               EP   P  L  +T
Sbjct: 182 ----EPVPGPEVLTGST 194


>gi|19347824|gb|AAL86324.1| unknown protein [Arabidopsis thaliana]
          Length = 585

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 50/129 (38%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE 286
           V  G  L +A  IL +    C+ VVD+   L GI+T GDI R          D NT  V 
Sbjct: 432 VSSGTTLREARNILKKSHQNCIMVVDDDDFLAGILTHGDIRRYLSNNASTILDENTCPVS 491

Query: 287 DVMIKNPK---------VILEDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGI 329
            V  K                D  + VA +L+    +  L VV   +        K +G+
Sbjct: 492 SVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGL 551

Query: 330 VHFLDLLRF 338
           +H+  +  F
Sbjct: 552 LHYDSIWTF 560


>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 146

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVIL 297
           DA  +L++ + G V V+  G ++ GI++E DI R     ++   T  V D+M     V  
Sbjct: 27  DAARLLAQHKIGAVLVM-TGDRVAGILSERDIVRGLADAMDVCVTAKVRDLMTAEVFVCH 85

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ED  +   M+++    I  L V+D   +  G+V   D+++
Sbjct: 86  EDDTVERLMEIMTAKRIRHLPVMDSSGEVTGMVTIGDVVK 125


>gi|291615847|ref|YP_003518589.1| YfeU [Pantoea ananatis LMG 20103]
 gi|291150877|gb|ADD75461.1| YfeU [Pantoea ananatis LMG 20103]
          Length = 343

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 46/137 (33%), Positives = 59/137 (43%), Gaps = 25/137 (18%)

Query: 56  AVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFV-------HAA----- 99
           AVE I A     GR+V  G G SG +G   AS    T GTP   V       H A     
Sbjct: 93  AVEAICAAFSAGGRLVYCGAGTSGRLGILDASECPPTFGTPRDQVIGLIAGGHQAILQAV 152

Query: 100 -------EASHGDLGMI--TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
                  E    DL  I  +R D+++ ++ SG +  +   L YAR+     IA+T    S
Sbjct: 153 ENAEDNVEQGAQDLKAIHFSRHDVLVGIAASGRTPYVLGALDYARQCGASTIALTCNPHS 212

Query: 151 VVACHADIVLTLPKEPE 167
            +A  ADI LT    PE
Sbjct: 213 KMAQVADIALTPVVGPE 229


>gi|254557976|ref|YP_003064393.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|254046903|gb|ACT63696.1| transcription regulator [Lactobacillus plantarum JDM1]
          Length = 282

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 4/136 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDL 114
           A  ++ A K  V + G+G S  + +         G     +H+ +     +GM T R ++
Sbjct: 121 AASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKA--VIHSQDPHLLAVGMTTQRQNV 178

Query: 115 IIVL-SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++L S SG   E   +   A   ++P+I ++    S +   ADI+L      E+     
Sbjct: 179 VLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLADIILINDDSEENQTARA 238

Query: 174 APTTSAIMQLAIGDAL 189
           A TTS + QL + D L
Sbjct: 239 AATTSLMAQLYVVDLL 254


>gi|55981029|ref|YP_144326.1| Mg2+ transporter MgtE [Thermus thermophilus HB8]
 gi|81600604|sp|Q5SMG8|MGTE_THET8 RecName: Full=Magnesium transporter mgtE
 gi|55772442|dbj|BAD70883.1| Mg2+ transporter MgtE [Thermus thermophilus HB8]
          Length = 450

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +   +V   + M   + +  ++   P  DA TI        + VVDE  +LKG+++ 
Sbjct: 135 GGLMTPEYVAVREGMTVEEVLRFLRRAAP--DAETIY------YIYVVDEKGRLKGVLSL 186

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+      D  T   E   I NPKV+    DT      +L+  ++ +VL VVD+  + +
Sbjct: 187 RDLI---VADPRTRVAE---IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 240

Query: 328 GIVHFLDLL 336
           GIV   D+L
Sbjct: 241 GIVTVDDVL 249


>gi|30248539|ref|NP_840609.1| CBS domain-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138425|emb|CAD84435.1| CBS domain [Nitrosomonas europaea ATCC 19718]
          Length = 127

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +G KL G++++ D+   +H   NT     V D+M   P VI     + +A++++  + I+
Sbjct: 40  DGGKLVGVLSDRDLSMAWHGSGNTKDEHLVRDLMTDTPVVIDPSAEINMAIRIMLDNKIN 99

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            L+V  +  +  GI+   DLLR+
Sbjct: 100 SLIVRAEENQPWGILTSTDLLRY 122


>gi|120598450|ref|YP_963024.1| formate/nitrite transporter [Shewanella sp. W3-18-1]
 gi|146293472|ref|YP_001183896.1| formate/nitrite transporter [Shewanella putrefaciens CN-32]
 gi|120558543|gb|ABM24470.1| formate/nitrite transporter [Shewanella sp. W3-18-1]
 gi|145565162|gb|ABP76097.1| formate/nitrite transporter [Shewanella putrefaciens CN-32]
          Length = 537

 Score = 37.7 bits (86), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K +  + V DVM ++P  +  D  +   ++LL   N+    VVDD Q  +G +   DLLR
Sbjct: 373 KPIPKMCVSDVMDRHPITLSADQSVYAGLKLLSDANVRSAPVVDDKQALVGFISQQDLLR 432


>gi|329848831|ref|ZP_08263859.1| SIS domain protein [Asticcacaulis biprosthecum C19]
 gi|328843894|gb|EGF93463.1| SIS domain protein [Asticcacaulis biprosthecum C19]
          Length = 353

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 59  KIKAIKGRVVIT-GIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           ++KA   R VIT   G S H    G  L  T A  G P+     + +S     ++  D L
Sbjct: 45  RLKAQPPRAVITVARGSSDHAATYGKYLIETFA--GVPTSTAAMSVSSIYAAPLVAADTL 102

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            I +S SG S +L A +   R+    ++A+ ++ +S +A  AD++L L   PE
Sbjct: 103 CIAISQSGRSPDLLASVEAHRKAGAYVVALVNDEESPLAALADVLLPLKAGPE 155


>gi|261344416|ref|ZP_05972060.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
 gi|282567319|gb|EFB72854.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
          Length = 286

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 15/152 (9%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-----TPSFFVHAAEASHGDL 106
           QF   VE + + + RV I GIG SG     L+  L   G      P   V  A A     
Sbjct: 124 QFEKIVEILDSAQ-RVQIVGIGGSGLTAKDLSYKLQKIGITTLVEPDHHVQIAAAL---- 178

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
             +T  D+ IV+S+SG   ++             +IAIT    S +A  +D VL ++ +E
Sbjct: 179 -TLTPKDVQIVISFSGKRKDMLTAANIGHNNGACVIAITRSKDSPLAQLSDYVLESMAEE 237

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            E     ++  T+   Q  + D L +ALL+ R
Sbjct: 238 NEWRSSSISSRTA---QNTLTDLLFMALLQKR 266


>gi|167755275|ref|ZP_02427402.1| hypothetical protein CLORAM_00780 [Clostridium ramosum DSM 1402]
 gi|167705325|gb|EDS19904.1| hypothetical protein CLORAM_00780 [Clostridium ramosum DSM 1402]
          Length = 297

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M   +DL I LS+SG S E+  I    ++ ++P+IAITS  ++ +   ADIVL +    +
Sbjct: 175 MANSNDLGICLSYSGESGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREK 234

Query: 168 S 168
           S
Sbjct: 235 S 235


>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
 gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
          Length = 143

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 5/104 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNP 293
             +++AITI++EK  G + VV EG+K+ GI++E D  R      +   + +V ++M    
Sbjct: 23  ATVLEAITIMAEKGIGAL-VVAEGEKVVGILSERDYTRKVTLMERSSYSTTVAEIMTAKV 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  +  +   +QL+   ++  L V+D+ +K +G +   DL++
Sbjct: 82  ITVGLNNTVEECLQLMTDRHLRHLPVLDN-EKLVGFISIGDLVK 124


>gi|205373803|ref|ZP_03226605.1| CBS domain-containing protein [Bacillus coahuilensis m4-4]
          Length = 215

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/116 (23%), Positives = 56/116 (48%), Gaps = 19/116 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------LNTLSV 285
           VK    +  A+ +L E+    + VV+  Q+ +G++T  ++++ ++K        L+   V
Sbjct: 19  VKTEDTVRQALEVLEEQGIDGIPVVNSKQEYQGMVTRFEVYKKYYKSDLSREDFLDQTKV 78

Query: 286 EDVMIKNPKVI-----LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V  +  + I      E+TLL +        +  ++ V+DD  K +GIV   D++
Sbjct: 79  SEVSTRKDRFIDGEEVFENTLLELK-------DFPIIAVIDDENKMLGIVSRYDVM 127


>gi|163782940|ref|ZP_02177935.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881620|gb|EDP75129.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 624

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 7/111 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSV 285
           ++PL++    +++A  ++ EK F CV V   G    GI+TE DI +      +D ++  +
Sbjct: 163 AVPLLRGEDSVLEAARLMREKNFSCVFV---GNGQTGIVTERDIIKRVVAEGRDPSSTRL 219

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++M      + ED+ L  A+  +   NI  L V  D  + IG++   D++
Sbjct: 220 SEIMSYPVVAVEEDSFLFEAIIEMANKNIRRLGVSRDG-RLIGVIEDKDII 269


>gi|158336590|ref|YP_001517764.1| signal transduction protein [Acaryochloris marina MBIC11017]
 gi|158306831|gb|ABW28448.1| signal transduction protein containing an EAL domain, a PAS domain,
           a CBS domain pair and a GGDEF domain [Acaryochloris
           marina MBIC11017]
          Length = 1405

 Score = 37.7 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 4/79 (5%)

Query: 256 VVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQ 311
           +V   QKL GI+TE DI +      D + +S  +VM      +LE  L  +   + LL+ 
Sbjct: 63  LVQHQQKLVGILTERDIVKLSTTTTDFSQVSASEVMSTELYTLLETELQDILTPLTLLQT 122

Query: 312 HNISVLMVVDDCQKAIGIV 330
           H+I  L V++D    IG++
Sbjct: 123 HHIRHLPVLNDTGGLIGVI 141


>gi|147678461|ref|YP_001212676.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
 gi|146274558|dbj|BAF60307.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
          Length = 211

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 13/110 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVE 286
           + +A+ I+ + +   + VV     L+G++TE ++                +  L  ++V 
Sbjct: 20  IFEALEIMKKHKIRQLPVVSAEGHLEGLVTEKELLTVSPSPATSLSIYELNYLLAKMTVA 79

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + M+KNP  +  DT L  A  L+R+H I  + V++  + A GI+   D+ 
Sbjct: 80  EAMVKNPLTVTTDTTLEEAALLMREHKIGSVPVMEGGRIA-GIITVTDIF 128


>gi|73668515|ref|YP_304530.1| hypothetical protein Mbar_A0978 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395677|gb|AAZ69950.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 364

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D +  + EK+     V+ EG  LKGI+T  DI R    D     V D+M ++   +  D 
Sbjct: 263 DLVKFMFEKKHMGYPVM-EGDFLKGIVTFTDIQRIPSVDRPAAKVSDIMTRDVISVSPDA 321

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  ++L+   NI  ++V+D+    +GI+   DL+R
Sbjct: 322 QASDVLKLVSSKNIGRVLVIDNGS-IVGILSRTDLVR 357


>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
 gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
          Length = 147

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 13/96 (13%)

Query: 254 VAVVDEGQKLKGIITEGDI-------FRNFHKD------LNTLSVEDVMIKNPKVILEDT 300
           + VVD    LKGI+T+ D+       F  F  +      L    V  +M +NP  I + +
Sbjct: 38  LPVVDNDGNLKGIVTDRDLRLATDSPFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYS 97

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  A +L+R  N+  L VVD   K IG+V   DLL
Sbjct: 98  PVVDAAKLMRVSNVGGLPVVDKNGKLIGMVTRSDLL 133


>gi|296119265|ref|ZP_06837833.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967657|gb|EFG80914.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 506

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 49/219 (22%), Positives = 94/219 (42%), Gaps = 23/219 (10%)

Query: 137 FSIPLIAITSENKSVVACHA---DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            S+  ++   ++ + VA H    D VL LP E    P  +  +      + +G  LA A 
Sbjct: 1   MSVNRVSTGGDDPNKVALHGLTFDDVLLLPAESNVVPSEVDTSAQFTRNIRLGIPLASAA 60

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP--LIDAIT------- 244
           +++   +     +   GG +G L    S    + + + +VK      + D +T       
Sbjct: 61  MDTVTEARMAVAMARQGG-IGVLHRNLSSEEQA-EQVEIVKRSESGMVTDPVTAHPDMSI 118

Query: 245 -----ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
                + +  R   + VVDE   L GI T  D+   F +D  +  V ++M   P V+ ++
Sbjct: 119 QEVDDLCARFRISGLPVVDEDGTLLGICTNRDM--RFERDY-SRKVSEIMTSMPLVVAKE 175

Query: 300 TL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +    A++LL  + +  L ++DD  K +G++   D ++
Sbjct: 176 GVSKDEALELLSANKVEKLPIIDDNNKLVGLITVKDFVK 214


>gi|237735023|ref|ZP_04565504.1| sugar isomerase [Mollicutes bacterium D7]
 gi|229381799|gb|EEO31890.1| sugar isomerase [Coprobacillus sp. D7]
          Length = 291

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 23/61 (37%), Positives = 36/61 (59%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M   +DL I LS+SG S E+  I    ++ ++P+IAITS  ++ +   ADIVL +    +
Sbjct: 169 MANSNDLGICLSYSGESGEIIKIANILKKKNVPIIAITSIGENSLTRLADIVLRVTTREK 228

Query: 168 S 168
           S
Sbjct: 229 S 229


>gi|731323|sp|P39567|IMDH1_YEAST RecName: Full=Putative inosine-5'-monophosphate dehydrogenase IMD1;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|456156|gb|AAC09509.1| Yar073wp [Saccharomyces cerevisiae]
          Length = 403

 Score = 37.7 bits (86), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)

Query: 251 FGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           F    V  +G+   KL G IT  DI   F +D N+L V+DVM KNP    +   L+   +
Sbjct: 146 FAGFPVTADGKRNAKLVGAITSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITLSEGNE 202

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L++     L+VVD+    + ++   DL++
Sbjct: 203 ILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|257054544|ref|YP_003132376.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis
           DSM 43017]
 gi|256584416|gb|ACU95549.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis
           DSM 43017]
          Length = 514

 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 80/196 (40%), Gaps = 20/196 (10%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP E +  P G+  +T+    + +   L  A +++   +     +   GG LG L
Sbjct: 33  DDVLLLPAESDVIPSGVDTSTNLTRNIRLNIPLVSAAMDTVTEARMAIAMARQGG-LGVL 91

Query: 217 FVCASDVMHSGDSIPLVK----------IGCPLIDAITILSEK----RFGCVAVVDEGQK 262
                 +     ++ +VK          + C   D +  + E     R   V V D    
Sbjct: 92  QRNLP-IEEQAQAVEVVKRSESGMVTDPVTCSPDDTLAEVDELCARFRISGVPVTDASGT 150

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVD 321
           L GIIT  D+   F  D +   V +VM K P V  +       A+ LLR+H +  L +VD
Sbjct: 151 LVGIITNRDM--RFEVDYSK-PVREVMTKAPLVTAQVGVTADAALGLLRRHKVEKLPIVD 207

Query: 322 DCQKAIGIVHFLDLLR 337
              K  G++   D ++
Sbjct: 208 GDGKLRGLITVKDFVK 223


>gi|319426775|gb|ADV54849.1| formate/nitrite transporter [Shewanella putrefaciens 200]
          Length = 537

 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K +  + V DVM ++P  +  D  +   ++LL   N+    VVDD Q  +G +   DLLR
Sbjct: 373 KPIPKMCVSDVMDRHPITLSADQSVYAGLKLLSDANVRSAPVVDDKQALVGFISQQDLLR 432


>gi|117919684|ref|YP_868876.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. ANA-3]
 gi|117612016|gb|ABK47470.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. ANA-3]
          Length = 488

 Score = 37.4 bits (85), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++  
Sbjct: 106 LADLKVLTAKNGFAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E T L    +L+  + I  ++VVDD  K  G++   D 
Sbjct: 163 AEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDF 201


>gi|313679227|ref|YP_004056966.1| cbs domain containing protein [Oceanithermus profundus DSM 14977]
 gi|313151942|gb|ADR35793.1| CBS domain containing protein [Oceanithermus profundus DSM 14977]
          Length = 151

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 2/53 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +VM +   +P++K G PL   +  L E  +  + VVDEG +L GIIT GD+ 
Sbjct: 94  EEVMRT--EVPVLKPGDPLRVVLDKLIENLYRRMPVVDEGGRLVGIITRGDLL 144


>gi|310659366|ref|YP_003937087.1| cbs domain-containing protein [Clostridium sticklandii DSM 519]
 gi|308826144|emb|CBH22182.1| CBS domain containing protein [Clostridium sticklandii]
          Length = 150

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 28/123 (22%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR-----------------------NFH 277
           AI +L E     + VVDE   + GIITEGD+ +R                        F 
Sbjct: 23  AIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIKPPRYLAIFDSYIFIDNPSKFE 82

Query: 278 KDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           K L  ++   VEDVM     VI  +  +  A  L+ +H ++ L V+++  K +GI+   D
Sbjct: 83  KQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMTKHKVNRLPVIEEG-KLVGIISRRD 141

Query: 335 LLR 337
           +++
Sbjct: 142 IIK 144


>gi|295097544|emb|CBK86634.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 291

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    +   +  G P+  ++       + L  + R D++++++   + 
Sbjct: 139 QVAIFGIGASGILAEYTSRLFSRIGLPAIPLNRTGIGLAEQLIALQRGDVLVMMAQKSAH 198

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E +  L  A+R  IP I +T+   S  +  A +V+ +P+  E
Sbjct: 199 REGQTTLREAKRLGIPTILLTNATDSRFSKEASVVIHVPRGGE 241


>gi|238918929|ref|YP_002932443.1| hypothetical protein NT01EI_0995 [Edwardsiella ictaluri 93-146]
 gi|259509922|sp|C5BBH3|MURQ_EDWI9 RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|238868497|gb|ACR68208.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 300

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 52  QFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPS------------FF 95
           Q   AV+ + A    +GR++  G G SG +G   AS    T GTP+              
Sbjct: 49  QIAQAVDAVSAAFARQGRLIYCGAGTSGRLGILDASECPPTFGTPAGQVIGVIAGGEPAI 108

Query: 96  VHAAE-------ASHGDLG--MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           + A E       A+  DL    ++  D+++ ++ SG +  +   L YAR      +A++S
Sbjct: 109 LQAVENAEDNPQAAQDDLQRLALSSRDVVVGIAASGRTPYVLGALRYARGVGATTVALSS 168

Query: 147 ENKSVVACHADIVLTLPKEPE 167
              S +A  ADI+LT    PE
Sbjct: 169 NPDSPMAPLADILLTPIVGPE 189


>gi|254512935|ref|ZP_05125001.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221532934|gb|EEE35929.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 116

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL--SVEDVMIKNPKVILED 299
           + IL +KR G V V D+   L+GI++E DI R   +    TL  SV D+M    K    D
Sbjct: 1   MDILRDKRIGAVVVTDQNGALQGILSERDIVRRMAETPGQTLPQSVADLMTSEVKTCAPD 60

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LL   ++ +       + V+ D  K  G++   D++ F
Sbjct: 61  DLLNDVLKTMTDGRFRHMPVLSDG-KLRGVITIGDVVHF 98


>gi|212634311|ref|YP_002310836.1| inosine 5'-monophosphate dehydrogenase [Shewanella piezotolerans
           WP3]
 gi|212555795|gb|ACJ28249.1| IMP dehydrogenase [Shewanella piezotolerans WP3]
          Length = 490

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 6/98 (6%)

Query: 243 ITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--ED 299
           + +L+EK  F    VV+E  +L GIIT  D+   F  D  + +V+ VM    +++   E 
Sbjct: 109 LKVLTEKNGFAGYPVVNEANELVGIITGRDV--RFVTDW-SRTVDQVMTPKDRLVTVAEG 165

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L     L+  H +  ++VVDD  K  G++   D  +
Sbjct: 166 TKLDEVQTLMHSHRVEKVLVVDDNFKLKGLITVKDFQK 203


>gi|87199564|ref|YP_496821.1| RpiR family transcriptional regulator [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135245|gb|ABD25987.1| transcriptional regulator, RpiR family [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 296

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF- 95
           G+ +L  SL          AV+ I+A + RV I GIG S  I       L   G  +   
Sbjct: 119 GIQALRDSLSVLDPKAMAAAVDIIRAAR-RVEIYGIGSSAPIAEDAHYRLLRIGLDARVV 177

Query: 96  ----VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
               V A  AS  D     +D  ++ +S SGS++E  A    A       I IT+  +S 
Sbjct: 178 IDSHVQAISASRCD-----KDVAVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSP 232

Query: 152 VACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAI 185
           +  +AD+VL T+ +E       +   TS I QL +
Sbjct: 233 IQAYADVVLFTMARETRFRTEAM---TSRIAQLCV 264


>gi|113969578|ref|YP_733371.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. MR-4]
 gi|113884262|gb|ABI38314.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. MR-4]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++  
Sbjct: 106 LADLKVLTAKNGFAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E T L    +L+  + I  ++VVDD  K  G++   D 
Sbjct: 163 AEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDF 201


>gi|296332140|ref|ZP_06874603.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305672880|ref|YP_003864551.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. spizizenii str. W23]
 gi|317376185|sp|E0U070|GLMS_BACPZ RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|283824524|gb|ADB43059.1| putative glucosamine-fructose-6-phosphate aminotransferase
           [Bacillus subtilis subsp. spizizenii ATCC 6633]
 gi|296150632|gb|EFG91518.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305411123|gb|ADM36241.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIIGCGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LA+
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAV 411


>gi|145590453|ref|YP_001152455.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282221|gb|ABP49803.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 128

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 12/106 (11%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NFHKDLNTLSVEDVMIK 291
           P+  A+  +     G V VVD      GIITE DI R      +F   L  ++ ++++  
Sbjct: 20  PIECAVAKMYASNVGSVVVVDRTGSPVGIITERDIVRLLAEEVDFKTPLERVARKNLVTA 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +P    +DT++  A +++ + NI  + VV+   + IG+V   D+LR
Sbjct: 80  SP----DDTVIATAAKMI-EKNIRHIPVVEG-GRVIGVVSIRDVLR 119


>gi|56708824|ref|YP_164865.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680509|gb|AAV97174.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
          Length = 174

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL-- 283
           G+++  V+ G  +   + +L +KR G V V D+   L GI++E DI R        TL  
Sbjct: 43  GEAVFSVRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVRRMADTPGQTLPQ 102

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E +M +  +    D  L V ++ + +     L V+ D  K  G++   D++ F
Sbjct: 103 QAEGLMTRAVQTCAPDETLNVVLKRMTEGRFRHLPVMRDG-KLCGMITIGDVVNF 156


>gi|329894378|ref|ZP_08270248.1| putative signal-transduction protein containing cAMP-binding [gamma
           proteobacterium IMCC3088]
 gi|328923174|gb|EGG30497.1| putative signal-transduction protein containing cAMP-binding [gamma
           proteobacterium IMCC3088]
          Length = 615

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 10/113 (8%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VE 286
           S+  V    P+     ++SE+R    A + EG+ L GI+T+ D+  R   K L+ L  + 
Sbjct: 158 SLLTVAAATPIQHVAQLMSERRVSS-AFITEGETLCGIVTDRDLRVRCVAKGLDVLEPIS 216

Query: 287 DVMIKNPKVILEDTLL---TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +M  +PK +     +   T+AM  L  H+I V  V +DC   +G+V   DL+
Sbjct: 217 AIMTTDPKTLNAQATIFDVTLAMTQLGVHHIPV--VSEDC--LVGVVTTSDLM 265


>gi|325570029|ref|ZP_08145954.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156857|gb|EGC69028.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           casseliflavus ATCC 12755]
          Length = 603

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 4/144 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G    S L         VH +     ++ +++     + LS SG + 
Sbjct: 293 RIYIIACGTSNHAGWAAKSILEKLTQIPVEVHLSSEFGYNMPLLSAKPFFLFLSQSGETA 352

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    +  +P + IT+   S ++  A+  L L   PE     +A T +   Q+A+
Sbjct: 353 DSRQVLVTINQLGLPSLTITNVAGSTLSREANHTLLLHAGPEIA---VASTKAYTGQIAV 409

Query: 186 GDALAIALLESRNFSEN-DFYVLH 208
              LA A+ + +   E  DF V H
Sbjct: 410 MTLLAKAIGDEKAVPEALDFDVFH 433


>gi|300857844|ref|YP_003782827.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685298|gb|ADK28220.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205574|gb|ADL09916.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis C231]
 gi|302330128|gb|ADL20322.1| Inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275809|gb|ADO25708.1| Inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis I19]
          Length = 506

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQL 308
           R   + VVD+   L GI T  D+   F +D  ++ V ++M + P V+ E+ +    A+ L
Sbjct: 129 RISGLPVVDDNGTLLGICTNRDM--RFEQDF-SIKVSEIMTRMPLVVAEEGVTKQQALNL 185

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + +  L +VD   K +G++   D ++
Sbjct: 186 LSANKVEKLPIVDKQGKLVGLITVKDFVK 214


>gi|302039061|ref|YP_003799383.1| hypothetical protein NIDE3782 [Candidatus Nitrospira defluvii]
 gi|300607125|emb|CBK43458.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 144

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 51/101 (50%), Gaps = 6/101 (5%)

Query: 241 DAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKV 295
           DA+TI   ++++ FG + VV E   L G++TE D+ +     +DL+ +   ++M   P  
Sbjct: 34  DALTIGRLMTKQNFGGLPVVAEDGSLVGLVTEYDLLQAMIEGRDLHKVLASEIMTTQPLA 93

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             E+  L     L +   ++ L VV   Q  +GIV   D+L
Sbjct: 94  AQENMTLEEVANLFQDRYVTRLPVVRGKQ-LVGIVARRDVL 133


>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
 gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
           acidovorans SPH-1]
          Length = 146

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           ++DA+ ++++K  G + V+ EG ++ GI+TE D  R      +      V DVM ++   
Sbjct: 25  VLDALRLMADKGIGALLVM-EGSEIAGIVTERDYARKIALLGRTSGATLVRDVMTRDVLF 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +         M ++ ++ +  L VVD+  K +G++   DL++
Sbjct: 84  VGPTQTTQECMAVMTENRLRHLPVVDEGGKLLGLISIGDLVK 125


>gi|55379325|ref|YP_137175.1| inosine monophosphate dehydrogenase [Haloarcula marismortui ATCC
           43049]
 gi|55232050|gb|AAV47469.1| putative inosine monophosphate dehydrogenase [Haloarcula
           marismortui ATCC 43049]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 60/130 (46%), Gaps = 12/130 (9%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGII 267
           G  G++ V   D M     +  V I     DA+  L E+ F  V V+   D+G++ +GII
Sbjct: 4   GSSGSMNVA--DAMTPRSEVVTVTIPGTRDDALEYLQEQAFSSVPVIKETDDGEEFRGII 61

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +   +  +  +D   L VE+V       I  DT +  A Q++ +     L +VD   K  
Sbjct: 62  SRDALIESPDEDQLALLVEEV-----PAISGDTSIEAAAQVMVEDGERRLPIVDGELK-- 114

Query: 328 GIVHFLDLLR 337
           GI+   D++R
Sbjct: 115 GIITVTDVIR 124


>gi|291549735|emb|CBL25997.1| Predicted phosphosugar isomerases [Ruminococcus torques L2-14]
          Length = 338

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGT-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           + + G G +  + S L+  + +  T P ++  AAE        +T+D ++I  S SG++ 
Sbjct: 38  LYLVGTGGTYAMASPLSYLIKTNSTIPWYYEIAAELVTAKPKQLTKDSVVITASLSGTTV 97

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           E      YA+     +IA+  E +  +A +AD V 
Sbjct: 98  ETINAAKYAKEVGATVIALVGEKECPLAEYADYVF 132


>gi|261866992|ref|YP_003254914.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412324|gb|ACX81695.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 304

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 52  QFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFV----------- 96
           Q   AVE+I A     GR+V  G G SG +G   AS    T G PS  V           
Sbjct: 54  QIAQAVERIVAAFQAGGRLVYLGAGTSGRLGVLDASECPPTFGVPSGMVVGSIAGGETAL 113

Query: 97  -HAAEASHGDLGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            +A E +  +     +D         D+++ ++ SG +  +   L YA++     +++ S
Sbjct: 114 RNAVEGAEDNAAAGEQDLRHINFSAKDVLVGIAASGRTPYVIGGLNYAKQLGATTVSLVS 173

Query: 147 ENKSVVACHADIVLTLPKEPES 168
              +V++  ADI +T    PE+
Sbjct: 174 NPNAVMSDIADIAITTAVGPEA 195


>gi|227830724|ref|YP_002832504.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus L.S.2.15]
 gi|227457172|gb|ACP35859.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.S.2.15]
          Length = 591

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LE+ + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLENAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|169830568|ref|YP_001716550.1| glucosamine--fructose-6-phosphate aminotransferase [Candidatus
           Desulforudis audaxviator MP104C]
 gi|169637412|gb|ACA58918.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Candidatus Desulforudis audaxviator MP104C]
          Length = 609

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 3/91 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +I   DL++V+S SG + + +A L  A+     ++AIT+   S +A  AD VL     PE
Sbjct: 337 LIGPGDLVVVVSQSGETADTRAALREAKSRGARVVAITNVVGSSIAREADSVLYTWAGPE 396

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
                +A T + + QLA    LA+ L   R 
Sbjct: 397 IA---VASTKAYVTQLAAFYLLAVWLAGERG 424


>gi|170758958|ref|YP_001786467.1| CBS domain-containing protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405947|gb|ACA54358.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 126

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
            + +++E       V DE   L G+I + DI+R   ++   +T  VE VM K       E
Sbjct: 22  VLNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTCPVEWVMTKEVFTASEE 81

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++++A ++L + +I  + +VD  +K +GIV   D+L+
Sbjct: 82  EDVISIAKKILDK-DIIAMPIVDSSKKLVGIVSIEDILK 119


>gi|149377477|ref|ZP_01895219.1| nucleotidyltransferase, CBS domain/cAMP binding protein
           [Marinobacter algicola DG893]
 gi|149358244|gb|EDM46724.1| nucleotidyltransferase, CBS domain/cAMP binding protein
           [Marinobacter algicola DG893]
          Length = 638

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 18/109 (16%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED---------- 287
           P+  A+  + E   G + + D+ +   GI T         +DL T+  E+          
Sbjct: 190 PVRKAVARMHENSVGSIVITDDKRHPTGIFT--------LRDLRTMVAEEKGPLDTPIGQ 241

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM +NP  +  +     A  L+ +H+ + + VVDD  + IG+V   DL 
Sbjct: 242 VMTRNPCCLTANADAFEAAMLMAEHHFAHICVVDDDHRLIGMVSERDLF 290


>gi|94266305|ref|ZP_01290008.1| CBS [delta proteobacterium MLMS-1]
 gi|93453096|gb|EAT03572.1| CBS [delta proteobacterium MLMS-1]
          Length = 226

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVE 286
           L+ A  ++ E     + VV  G KL GI+T+ D+                +  L+ + V+
Sbjct: 20  LMRATRVMKENNIRRLPVVSHG-KLIGIVTDRDVKDASPSKTASLDIHELYYLLSEMKVK 78

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DVM  +P  +     L +A  ++ +  IS L VVDD    IG++   D+LR
Sbjct: 79  DVMTASPLTLRGKDSLELAAVIMLEDKISGLPVVDDTSHLIGLLSETDVLR 129


>gi|19703963|ref|NP_603525.1| glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gi|19714141|gb|AAL94824.1| Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 352

 Score = 37.4 bits (85), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 113 DLIIVLSWSG-SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           DL+I +S SG S+  + A+ Y  +  +IP IAITS N S++A  ++++L L
Sbjct: 88  DLVIAISQSGKSASTISALKYVKKCKNIPSIAITSNNMSIIAKESNMILDL 138


>gi|294139723|ref|YP_003555701.1| hemolysin protein [Shewanella violacea DSS12]
 gi|293326192|dbj|BAJ00923.1| hemolysin protein, putative [Shewanella violacea DSS12]
          Length = 427

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)

Query: 279 DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL  ++VED+MI    +    + D   ++  Q+++  +  VL+  D+   A+G VH  D 
Sbjct: 197 DLEKVTVEDIMIPRSDLFAININDDFKSITKQMIQSPHTRVLLFRDNIDDAVGFVHLRDA 256

Query: 336 LRF 338
           LR 
Sbjct: 257 LRL 259


>gi|257438780|ref|ZP_05614535.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium
           prausnitzii A2-165]
 gi|257198748|gb|EEU97032.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium
           prausnitzii A2-165]
          Length = 611

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 72/146 (49%), Gaps = 6/146 (4%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGS-KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           E+++ I G V + G G + H G    A+  A    P+    A+E  + +  ++  +DL+I
Sbjct: 290 ERLRRI-GTVHLVGCGTAMHAGMVGKAAIEALARVPAQVEIASEFRYRN-PILRPEDLVI 347

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           ++S SG + +  A L  A+   +P++AI +   S +A  AD V+     PE     +A T
Sbjct: 348 IISQSGETSDTLAALKLAKSRGVPVLAIVNVVGSSIARAADYVMYTYAGPEIA---VAST 404

Query: 177 TSAIMQLAIGDALAIALLESRNFSEN 202
            + ++Q+ +    A+ L  +R    +
Sbjct: 405 KAYMVQMCVLYLFALRLAYARGMQTD 430


>gi|239904848|ref|YP_002951586.1| hypothetical protein DMR_02090 [Desulfovibrio magneticus RS-1]
 gi|239794711|dbj|BAH73700.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 129

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+  + E     + V+D   +L G++T+ D+    HK      + D+M  +   +  
Sbjct: 20  LADAVAAMQELFIRHIPVLDADGRLAGLVTQRDVLALEHKKDPGTPLRDIMRSDVATVAP 79

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           DT L  A + +  H    L VV      +GI+   D L+  I
Sbjct: 80  DTPLRTAAETMIFHKYGCLPVV-AAGNLVGIITETDFLKLAI 120


>gi|218691328|ref|YP_002399540.1| putative bifunctional protein: transcriptional regulator and sugar
           phosphate isomerase [Escherichia coli ED1a]
 gi|218428892|emb|CAR09694.1| putative bifunctional protein: transcriptional regulator and sugar
           phosphate isomerase [Escherichia coli ED1a]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|197249281|ref|YP_002147530.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197212984|gb|ACH50381.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 31/118 (26%), Positives = 49/118 (41%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVITGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           EL        R    ++AIT  + + +   A   L    E ++       +T A M L
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHAQMML 251


>gi|92117436|ref|YP_577165.1| signal-transduction protein [Nitrobacter hamburgensis X14]
 gi|91800330|gb|ABE62705.1| putative signal-transduction protein with CBS domains [Nitrobacter
           hamburgensis X14]
          Length = 231

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 34/129 (26%)

Query: 220 ASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           AS+VM S    P V +   C +IDA+ +L E     + VVD    L  I++EGD  R   
Sbjct: 9   ASEVMRS----PAVSVAPDCRVIDAVRLLMETNRRGLPVVDSSGILVRIVSEGDFLRRV- 63

Query: 278 KDLNTL--------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            +L T+                          SV+++M ++P  +  D  LT A+ L+  
Sbjct: 64  -ELGTVPTDRPWFDAFFGAGESATAFARAYGRSVDEIMTQDPVCVAPDADLTEAIALMES 122

Query: 312 HNISVLMVV 320
            +++ + VV
Sbjct: 123 RHVAQIPVV 131


>gi|295107589|emb|CBL05132.1| Inorganic pyrophosphatase/exopolyphosphatase [Gordonibacter
           pamelaeae 7-10-1-b]
          Length = 476

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           V DVM  +P  I  D  L  A +LLRQHN+  L+V +D
Sbjct: 100 VSDVMTPDPISIAHDATLLAAGRLLRQHNVRALVVTND 137


>gi|260462725|ref|ZP_05810931.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
 gi|259031631|gb|EEW32901.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
          Length = 301

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 23/213 (10%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCA----VEKI-- 60
           H  +V  +G      + VQ A + +  +   ++ +  SL G+++   H A    +E++  
Sbjct: 73  HAAAVRSRGVGFAGKAGVQVASQRLKGDHALVADMLRSLAGQIA---HLAEPSTIERLVT 129

Query: 61  --KAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLI 115
             KA+    RV   G+  S  +   L   L+  G  S  +H A  + GD LG  T +DL+
Sbjct: 130 TAKALTAARRVYCLGMRSSHAVAWHLHYILSLIGEKSVMLHGAGGTDGDVLGRATGEDLL 189

Query: 116 I---VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           I   VL ++  + EL     YA    +P++A+T    + +A  AD ++ +P    S  H 
Sbjct: 190 IAASVLPYTRLTIELAE---YAAGRGVPIVAVTDSEVAPLAQLADHLIIVPTASPSFFHT 246

Query: 173 LAPT---TSAIMQLAIGDALAIALLESRNFSEN 202
           +      +  +  L  G A   A+   R F E 
Sbjct: 247 MTQAFIVSEVLGALVAGQAGEGAIEALRRFDEQ 279


>gi|226501428|ref|NP_001148069.1| CBS domain containing protein [Zea mays]
 gi|195615614|gb|ACG29637.1| CBS domain containing protein [Zea mays]
 gi|223947611|gb|ACN27889.1| unknown [Zea mays]
          Length = 545

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 11/107 (10%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED-----VMI 290
           G  ++DA   ++ +R   V + D    L GI+T+ DI      +   L VE      +M 
Sbjct: 72  GTTVLDACRRMAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAE--GLRVEQTIMSKIMT 129

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +NP  ++ DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 130 RNPVYVMSDTLAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 172


>gi|91773827|ref|YP_566519.1| hypothetical protein Mbur_1886 [Methanococcoides burtonii DSM 6242]
 gi|91712842|gb|ABE52769.1| Cystathionine-beta-synthase and DUF293 domains-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 291

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 24/68 (35%), Positives = 37/68 (54%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           A V++  K+ G++T  DI         TL ++D+M KN   I  D+ L+ A+ L  +HNI
Sbjct: 205 APVEDNGKIVGMVTFMDIGETLASGKMTLKIKDIMTKNVITIDGDSSLSDAVHLFNEHNI 264

Query: 315 SVLMVVDD 322
             L+V  D
Sbjct: 265 GRLIVTID 272


>gi|145225485|ref|YP_001136163.1| inositol-5-monophosphate dehydrogenase [Mycobacterium gilvum
           PYR-GCK]
 gi|315445838|ref|YP_004078717.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217971|gb|ABP47375.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium gilvum
           PYR-GCK]
 gi|315264141|gb|ADU00883.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 517

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +    A+ L
Sbjct: 137 RISGLPVVDDKGSLVGIITNRDM--RFEVD-QSKPVAEVMTKAPLITAQEGVSAEAALGL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L +VD   K  G++   D ++
Sbjct: 194 LRRNKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|134299119|ref|YP_001112615.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
 gi|134051819|gb|ABO49790.1| putative signal-transduction protein with CBS domains
           [Desulfotomaculum reducens MI-1]
          Length = 210

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 14/112 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----------- 284
           G P++DA+  + + +   + V D+G +L G++TE ++         TLS           
Sbjct: 17  GTPILDALEKMKKLKIRQLPVTDKG-RLVGLVTERELLTVTPSPATTLSIFEMNYLLSKM 75

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM+K+P  +  +T +  A  ++R++ I  ++V+++  + +GI+   D+
Sbjct: 76  VVGEVMVKDPITVNPETTMEEAALIMRENKIGSMLVMEE-DELVGIITQTDI 126


>gi|325295193|ref|YP_004281707.1| signal transduction protein with CBS domains [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065641|gb|ADY73648.1| putative signal transduction protein with CBS domains
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 134

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           + +K  G + ++D G K  GIIT+ DI        K   TL V++VM K+P  I ED   
Sbjct: 27  MKDKMVGSLVILD-GDKPAGIITDRDIAIRVVGTGKTPKTL-VKEVMTKDPITIREDASF 84

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  R   +  L+VVD   K IG++   D+L  
Sbjct: 85  FELTKAFRDAAVRRLIVVDKNGKLIGLISIDDVLEL 120


>gi|284998237|ref|YP_003420005.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.D.8.5]
 gi|284446133|gb|ADB87635.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.D.8.5]
          Length = 591

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LE+ + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLENAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|257057548|ref|YP_003135380.1| transcriptional regulator, RpiR family [Saccharomonospora viridis
           DSM 43017]
 gi|256587420|gb|ACU98553.1| transcriptional regulator, RpiR family [Saccharomonospora viridis
           DSM 43017]
          Length = 333

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 58/132 (43%), Gaps = 2/132 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + G+G S  + + L   L   G  SF             +++  D+ + +S SG++ 
Sbjct: 170 RVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIMLTSAAVLSEGDVAVAISHSGATT 229

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +    L  A+      +AIT+  +S +A  AD VLT      +   G   T S I QL +
Sbjct: 230 DTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTTAARETTFRSGA--TASRIAQLTV 287

Query: 186 GDALAIALLESR 197
            D L I + + R
Sbjct: 288 IDCLFIGVAQRR 299


>gi|70606127|ref|YP_254997.1| hypothetical protein Saci_0288 [Sulfolobus acidocaldarius DSM 639]
 gi|68566775|gb|AAY79704.1| conserved CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 131

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 23/98 (23%), Positives = 52/98 (53%), Gaps = 1/98 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA  ++  +  G + +VD   +  GI+TE DI     +D+     + ++M ++P  I   
Sbjct: 22  DATKVMRREGVGSLVIVDNDFRPVGIVTERDIVYAIAQDIPIDTPISEIMSRDPVSINGG 81

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ A+ L+    I  L+V+++  + IG++   D+++
Sbjct: 82  SDVSEAVALMTSRGIRHLVVINNEGRTIGVISVRDVVK 119


>gi|114046811|ref|YP_737361.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. MR-7]
 gi|113888253|gb|ABI42304.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. MR-7]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++  
Sbjct: 106 LADLKVLTAKNGFAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKARLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E T L    +L+  + I  ++VVDD  K  G++   D 
Sbjct: 163 AEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDF 201


>gi|320450463|ref|YP_004202559.1| magnesium transporter [Thermus scotoductus SA-01]
 gi|320150632|gb|ADW22010.1| magnesium transporter [Thermus scotoductus SA-01]
          Length = 449

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 16/129 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +   +V   + M   + I  ++   P  DA TI        + VVDE  +LKG+++ 
Sbjct: 134 GGLMTPEYVAVREGMTVEEVIRFLRRAAP--DAETIY------YIYVVDEAGRLKGVLSL 185

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+      D  T   E   I NPKV+    DT      +L+  ++ +VL VVD+    +
Sbjct: 186 RDLI---VADPKTKVAE---IMNPKVVFARTDTDQEEVARLMADYDFTVLPVVDEDGVLV 239

Query: 328 GIVHFLDLL 336
           GIV   D+L
Sbjct: 240 GIVTVDDVL 248


>gi|319943797|ref|ZP_08018078.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC
           51599]
 gi|319743030|gb|EFV95436.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC
           51599]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 54/100 (54%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-- 297
           + I I  E R   + VV+ G +K+ GI+T  D+   F  +L+   V ++M    ++I   
Sbjct: 107 EVIAITREHRISGLPVVEGGSRKVVGIVTNRDL--RFESELDQ-PVRNIMTPRERLITVP 163

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E + L  A +L+ +H +  ++VV+D  +  G++   D+L+
Sbjct: 164 EGSSLDDAQKLMHKHRLERVLVVNDAFELRGLMTVKDILK 203


>gi|310641194|ref|YP_003945952.1| signal transduction protein with cbs and drtgg domains
           [Paenibacillus polymyxa SC2]
 gi|309246144|gb|ADO55711.1| Putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus polymyxa SC2]
          Length = 444

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 8/118 (6%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHK 278
            D+  S      +KI   L +   + +   +   A+VDE  +L GI++  D+   +  H 
Sbjct: 198 EDIAASKPKTLTLKINSTLTEFEELSATTGYHHFAIVDEWNRLIGIVSRKDVEGLQPEH- 256

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                +++  MI+NP  +   T L  A Q++    +  L VVD  +K +G V   ++L
Sbjct: 257 -----TMDKCMIRNPITVTYQTSLASAAQMMAWEGVDYLPVVDRNRKLLGSVTRREVL 309


>gi|296327531|ref|ZP_06870077.1| phosphosugar-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
 gi|296155357|gb|EFG96128.1| phosphosugar-binding protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 23726]
          Length = 352

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 1/51 (1%)

Query: 113 DLIIVLSWSG-SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           DL+I +S SG S+  + A+ Y  +  +IP IAITS N S++A  ++++L L
Sbjct: 88  DLVIAISQSGKSASTISALKYVKKCKNIPSIAITSNNMSIIAKESNMILDL 138


>gi|229579618|ref|YP_002838017.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus Y.G.57.14]
 gi|228010333|gb|ACP46095.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus Y.G.57.14]
          Length = 591

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 52/233 (22%), Positives = 101/233 (43%), Gaps = 19/233 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++T  G S H G   +  LA  G  S  + A+E  +     + + D++I +S SG + 
Sbjct: 295 RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLIASEYHNF---RVKKGDIVIAISQSGETL 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL-- 183
           ++K  +   +     +IA+T+  +S +A  +D  L +   PE         TS I  L  
Sbjct: 352 DVKMGIRKFKEEGAKIIALTNVIESDIARESDYKLYMRAGPEIGVAATKTFTSEIASLLF 411

Query: 184 --AIGDALAIALLESRNFSENDFYVLHPG--GKLGTLFVCASDVMHSGD--SIPLVKIGC 237
             ++ +  +I+ LE+ + +  +      G   K+G      ++  + G    +PL   G 
Sbjct: 412 LYSLIEKESISYLENAHETVRNVITETEGFAKKIGEELANKNNAYYLGRGLGVPLAMEGA 471

Query: 238 PLIDAITIL-------SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             I  I  +        E + G +A+V+ G  +   I +G++     K+L  +
Sbjct: 472 LKIKEIAYIHAEAYPAGESKHGPIALVENGFPIV-FINDGELVDELEKNLQEM 523


>gi|313125156|ref|YP_004035420.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312291521|gb|ADQ65981.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 132

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 54/110 (49%), Gaps = 3/110 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVE 286
            +P      P+ D  T++ +     V V+DE + L GIIT   + R     +DL + SV 
Sbjct: 9   DVPTAAPETPIADVATVMRDTDADAVVVLDEDRPL-GIITPATLGRAVVAGEDLGSESVA 67

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++  +P  I      +  + +  + ++   +V+D+  + +GIV F D+L
Sbjct: 68  ELVSGDPVTIRRVASRSDLVAVFAREDVREAIVLDEMDQYVGIVSFKDVL 117


>gi|158431290|pdb|2YVX|A Chain A, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431291|pdb|2YVX|B Chain B, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431292|pdb|2YVX|C Chain C, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431293|pdb|2YVX|D Chain D, Crystal Structure Of Magnesium Transporter Mgte
 gi|270047591|pdb|2ZY9|A Chain A, Improved Crystal Structure Of Magnesium Transporter Mgte
 gi|270047592|pdb|2ZY9|B Chain B, Improved Crystal Structure Of Magnesium Transporter Mgte
          Length = 473

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 16/129 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +   +V   + M   + +  ++   P  DA TI        + VVDE  +LKG+++ 
Sbjct: 158 GGLMTPEYVAVREGMTVEEVLRFLRRAAP--DAETIY------YIYVVDEKGRLKGVLSL 209

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+      D  T   E   I NPKV+    DT      +L+  ++ +VL VVD+  + +
Sbjct: 210 RDLI---VADPRTRVAE---IMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLV 263

Query: 328 GIVHFLDLL 336
           GIV   D+L
Sbjct: 264 GIVTVDDVL 272


>gi|73959175|ref|XP_537014.2| PREDICTED: similar to Chloride channel protein 7 (ClC-7) isoform 1
           [Canis familiaris]
          Length = 809

 Score = 37.4 bits (85), Expect = 3.1,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ + + M  +P  + +D  L    +L R   +  L+VVD+C + +G+V   DL R+
Sbjct: 738 TMDLSEFMNPSPYTVPQDASLPRVFKLFRALGLRHLVVVDNCNQVVGLVTRKDLARY 794


>gi|315634565|ref|ZP_07889850.1| RpiR family transcriptional regulator [Aggregatibacter segnis ATCC
           33393]
 gi|315476792|gb|EFU67539.1| RpiR family transcriptional regulator [Aggregatibacter segnis ATCC
           33393]
          Length = 302

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLGMITRDDLIIVLSWS 121
            RV I G+G SG       +     G P   V A+  +H       ++ R+D+ I +S S
Sbjct: 150 NRVFIFGVGTSGVTAEDAKNKFMRIGIP---VDASGNNHFMYMQAALLQRNDVAIGISHS 206

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           G S E    L  A+      +A+T   +S +  HAD VL
Sbjct: 207 GYSQETAHALKIAKDNGATTVALTHSMRSPLTEHADFVL 245


>gi|298674088|ref|YP_003725838.1| CBS domain-containing protein [Methanohalobium evestigatum Z-7303]
 gi|298287076|gb|ADI73042.1| CBS domain containing protein [Methanohalobium evestigatum Z-7303]
          Length = 284

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 52/96 (54%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + IL +K+   V V+ E  K+ GI++  ++ +   ++   L    +M ++P  I  D 
Sbjct: 26  EVLEILKDKQVSGVPVIKEN-KVVGIVSRNNLLKYPEEEQLAL----LMTRDPVTISPDV 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +TVA +LL  H++  L VVD  Q  +G+V   D++
Sbjct: 81  DITVAARLLLDHDVRRLPVVDGDQ-LVGLVTIADVV 115


>gi|291278884|ref|YP_003495719.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
           SSM1]
 gi|290753586|dbj|BAI79963.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
           SSM1]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 21/194 (10%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL +P++ E  P  ++ TT    ++ +   +  A +++   +     +   GG LG +
Sbjct: 13  DDVLLVPQKSEVLPKDVSTTTYLTSKIVLNIPIVSAAMDTVTEARMAIAIAQEGG-LGFI 71

Query: 217 FVCASDVMHSGDSIPLVKIGCP--LIDAITILSEK------------RFGCVAVVDEGQK 262
               S +    + +  VK      ++D ITI  EK            +   + VV +G K
Sbjct: 72  HKNMS-IEEQAEEVDKVKRSESGMIVDPITIEPEKTVQDALDLMAKYKISGIPVV-KGHK 129

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVD 321
           L GIIT  D+   F  D  T  VE  M K   V +   T L  A + L++H I  L+VVD
Sbjct: 130 LVGIITNRDL--RFVTDY-TGKVEKYMTKENLVTVPVGTSLEEAKEHLQKHRIEKLLVVD 186

Query: 322 DCQKAIGIVHFLDL 335
           D  +  G++   D+
Sbjct: 187 DNFELKGLITIKDI 200


>gi|269138124|ref|YP_003294824.1| putative DNA-binding transcriptional regulator [Edwardsiella tarda
           EIB202]
 gi|267983784|gb|ACY83613.1| putative DNA-binding transcriptional regulator [Edwardsiella tarda
           EIB202]
 gi|304558169|gb|ADM40833.1| putative RpiR-family transcriptional regulatory protein
           [Edwardsiella tarda FL6-60]
          Length = 279

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 56/112 (50%), Gaps = 3/112 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H ++++  ++     ++AEK  +++L+S+L      Q   A+  + + + R+VITG+G S
Sbjct: 84  HGILRHDPLKVVGEKLMAEK--IAALQSTLTINHEEQLQQALRMLLSAR-RIVITGLGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           G +    A+ L   G  ++    A         +   DL++ +S+SG   E+
Sbjct: 141 GLVAKDFANKLMQIGLAAYAESDAHVQIVCAQAMQPQDLLMAISYSGERKEV 192


>gi|26249601|ref|NP_755641.1| hypothetical protein c3770 [Escherichia coli CFT073]
 gi|227887742|ref|ZP_04005547.1| iron transport system regulatory protein FitR [Escherichia coli
           83972]
 gi|300973281|ref|ZP_07172120.1| SIS domain protein [Escherichia coli MS 45-1]
 gi|300993293|ref|ZP_07180330.1| SIS domain protein [Escherichia coli MS 200-1]
 gi|301048146|ref|ZP_07195183.1| SIS domain protein [Escherichia coli MS 185-1]
 gi|26110009|gb|AAN82214.1|AE016766_302 Hypothetical protein c3770 [Escherichia coli CFT073]
 gi|114152764|gb|ABI52627.1| FitR [Escherichia coli]
 gi|222034756|emb|CAP77498.1| hypothetical protein LF82_500 [Escherichia coli LF82]
 gi|227835138|gb|EEJ45604.1| iron transport system regulatory protein FitR [Escherichia coli
           83972]
 gi|300299982|gb|EFJ56367.1| SIS domain protein [Escherichia coli MS 185-1]
 gi|300305107|gb|EFJ59627.1| SIS domain protein [Escherichia coli MS 200-1]
 gi|300410861|gb|EFJ94399.1| SIS domain protein [Escherichia coli MS 45-1]
 gi|307555128|gb|ADN47903.1| iron transport system regulatory protein FitR [Escherichia coli ABU
           83972]
 gi|312947594|gb|ADR28421.1| putative bifunctional protein: transcriptional regulator and sugar
           phosphate isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|320195181|gb|EFW69810.1| hypothetical protein EcoM_02946 [Escherichia coli WV_060327]
 gi|324005376|gb|EGB74595.1| SIS domain protein [Escherichia coli MS 57-2]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|16077246|ref|NP_388059.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221307991|ref|ZP_03589838.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|221312314|ref|ZP_03594119.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. subtilis str. NCIB 3610]
 gi|221317247|ref|ZP_03598541.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. subtilis str. JH642]
 gi|221321510|ref|ZP_03602804.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis subsp. subtilis str. SMY]
 gi|317376186|sp|P0CI73|GLMS_BACSU RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|726480|gb|AAA64224.1| L-glutamine-D-fructose-6-phosphate amidotransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|2632445|emb|CAB11954.1| L-glutamine-D-fructose-6-phosphate amidotransferase [Bacillus
           subtilis subsp. subtilis str. 168]
 gi|3599596|dbj|BAA33071.1| L-GLUTAMINE-D-FRUCTOSE-6-PHOSPHATE AMIDO TRANSFERASE [Bacillus
           subtilis]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIIGCGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LA+
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAV 411


>gi|325844426|ref|ZP_08168153.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Turicibacter sp. HGF1]
 gi|325489100|gb|EGC91484.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Turicibacter sp. HGF1]
          Length = 594

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 11/147 (7%)

Query: 58  EKIKAIK--GRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           E +KA+    R+ I   G S H   +G ++   LA+  T    VH +     +  +I+++
Sbjct: 281 EIVKAVSEADRLYIVAAGTSMHAGFVGKQMFEQLAAIPTE---VHISSEFVYNTPVISQN 337

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
            L I +S SG + + +A+L   ++     + IT+   S ++  AD  L L   PE     
Sbjct: 338 PLFIFISQSGETADSRAVLVKIKQLGYKSLTITNVPGSTLSREADHTLLLYAGPEIA--- 394

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF 199
           +A T +   Q+A+   LA  + E+ N 
Sbjct: 395 VASTKAYTAQVAVQAILAARVGENHNL 421


>gi|321313852|ref|YP_004206139.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis BSn5]
 gi|320020126|gb|ADV95112.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           subtilis BSn5]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIIGCGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LA+
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAV 411


>gi|320101143|ref|YP_004176735.1| 3-hexulose-6-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
 gi|319753495|gb|ADV65253.1| 3-hexulose-6-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
          Length = 201

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 13/109 (11%)

Query: 60  IKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA---EASHGDLGMITRDDL 114
           I A+K   +V I G G+SG +G   A  L   G   + V       AS GD+        
Sbjct: 37  IDALKNGRKVFIIGAGRSGLVGKAFAMRLLHLGFNVYVVGETILPRASQGDV-------- 88

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           ++ +S SG +  + A    AR   + +IAIT+   S +   ADIV+ +P
Sbjct: 89  LVSISGSGRTRLVVAAAEAARSVGVKVIAITTYPDSPLGRIADIVVKIP 137


>gi|115380428|ref|ZP_01467417.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362562|gb|EAU61808.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
          Length = 400

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF--HKDLNTLSVEDVMIKNPKV 295
           L +   ++ ++  G V +VD    L GI+T+ D + R F  HK    L   DVM  + + 
Sbjct: 294 LREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLVIRAFTGHKSPEQLRAGDVMTDDVEC 353

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D  L   + ++ +  I  + VVD     IGI+   D+
Sbjct: 354 VHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGDI 393


>gi|56752006|ref|YP_172707.1| hypothetical protein syc1997_c [Synechococcus elongatus PCC 6301]
 gi|56686965|dbj|BAD80187.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 664

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 228 DSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLS 284
           D  PL V    P+   + ++  +    V +++  Q L GI TE D+ R       + +  
Sbjct: 14  DRQPLTVAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIGITITSTP 73

Query: 285 VEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHF---------L 333
           +E+V       I E  +  V   + L RQ+N+  L VV+   + IGI+ +         +
Sbjct: 74  IEEVATSTVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGIRRLLKPI 133

Query: 334 DLLRF 338
           DLLR 
Sbjct: 134 DLLRL 138


>gi|109897294|ref|YP_660549.1| DNA-binding transcriptional regulator HexR [Pseudoalteromonas
           atlantica T6c]
 gi|332307790|ref|YP_004435641.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|109699575|gb|ABG39495.1| transcriptional regulator, RpiR family [Pseudoalteromonas atlantica
           T6c]
 gi|332175119|gb|AEE24373.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 284

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           + DD+++++S +G +  L  +   AR     ++ ITS+N S +A   ++VL+L + PE  
Sbjct: 174 SEDDVVVLISHTGRTKSLVEVAQIARSNDATVVGITSQN-SPLAKECNLVLSL-EVPEDT 231

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESR--NFSEN 202
              + P  S I QL + D LA      R   F EN
Sbjct: 232 DMYM-PMASRIAQLTLIDILATGFTLRRGTKFREN 265


>gi|212638001|ref|YP_002314521.1| glucosamine--fructose-6-phosphate aminotransferase [Anoxybacillus
           flavithermus WK1]
 gi|212559481|gb|ACJ32536.1| L-glutamine-D-fructose-6-phosphate amidotransferase [Anoxybacillus
           flavithermus WK1]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 46  QGELSFQFHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           QGEL+   +     ++A+K   R+ I   G S H G      + +       VH A    
Sbjct: 274 QGELAIDENI----VQAVKEADRLYIVACGTSYHAGLVGKQLIENWAKIPVEVHIASEFS 329

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            ++ +++   L I +S SG + + +A+L   +    P + IT+   S ++  AD  L L 
Sbjct: 330 YNMPLLSEKPLFIYISQSGETADSRAVLVRTKELGHPSLTITNVPGSTLSREADYTLLLH 389

Query: 164 KEPE 167
             PE
Sbjct: 390 AGPE 393


>gi|56697064|ref|YP_167427.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56678801|gb|AAV95467.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
          Length = 144

 Score = 37.4 bits (85), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 16/32 (50%), Positives = 22/32 (68%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           IL+EKR G V V D+G+  +GI++E DI R  
Sbjct: 30  ILAEKRIGTVVVSDDGETAQGILSERDIVREL 61


>gi|325181316|emb|CCA15731.1| myosinlike protein putative [Albugo laibachii Nc14]
          Length = 616

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 9/129 (6%)

Query: 216 LFVCASDVMHSGDSI-PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           LF+    V+ + D++ P+V+       A  ++  +R   V V +E  ++ GI+T  D+ R
Sbjct: 261 LFLATLSVIVNEDTVVPIVRPNDTAFQAAKLMLRERMSAVMVCNEADEMIGIMTSKDLMR 320

Query: 275 N---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM--VVDDCQKA-IG 328
                  D +   V  VM  NP    +DT  T+   L   HN   L   V+D  +K  +G
Sbjct: 321 RVVALDVDSSKCHVSSVMTTNPYTATKDT--TILETLHSMHNGQFLHVPVLDSSKKKLVG 378

Query: 329 IVHFLDLLR 337
           ++  L + R
Sbjct: 379 LLDVLQVTR 387


>gi|229176609|ref|ZP_04304018.1| Transcriptional regulator, RpiR [Bacillus cereus MM3]
 gi|228606865|gb|EEK64278.1| Transcriptional regulator, RpiR [Bacillus cereus MM3]
          Length = 287

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  + +YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAHYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|227874192|ref|ZP_03992395.1| possible transcriptional regulator RpiR [Oribacterium sinus F0268]
 gi|227839980|gb|EEJ50407.1| possible transcriptional regulator RpiR [Oribacterium sinus F0268]
          Length = 314

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/142 (24%), Positives = 63/142 (44%), Gaps = 3/142 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V+ G+G+S      L S L   G P      A        ++ + D++I +S  G S 
Sbjct: 160 RIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSIMEKKDILICVSNFGQSK 219

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG--LAPTTSAIMQL 183
            +      A++  I ++ I+S  +S +A  +D  L    +  +   G    P++  + QL
Sbjct: 220 SVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNNAQDGNLFDPSSENLAQL 279

Query: 184 AIGDALAIALLESRNFSENDFY 205
            I D L + L+  +N  +N  Y
Sbjct: 280 VIVDCLYM-LVAHKNKRKNITY 300


>gi|237732546|ref|ZP_04563027.1| N-acetylmuramic acid-6-phosphate etherase [Citrobacter sp. 30_2]
 gi|226908085|gb|EEH94003.1| N-acetylmuramic acid-6-phosphate etherase [Citrobacter sp. 30_2]
          Length = 297

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   AS    T             G P   + A E +  +  +   
Sbjct: 63  GRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDNPQLGED 122

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  DL++ L+ SG +  +   L YAR       AI+    S +A  ADI ++ 
Sbjct: 123 DLRTLNLTAQDLVVGLAASGRTPYVIGGLKYARSVGCTTAAISCNPDSPIAHEADIAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|261340428|ref|ZP_05968286.1| N-acetylmuramic acid 6-phosphate etherase [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317519|gb|EFC56457.1| N-acetylmuramic acid 6-phosphate etherase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 287

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 15/129 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH------GDLGMIT--RDDLII 116
           GR+VI G G SG I  + A+  A    P   + A E ++       DL  IT    D+++
Sbjct: 65  GRLVIVGAGPSGRIAEQAAAEYAPGKHPVLAITAGEEANSYEQGVADLQAITFGEHDMML 124

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH---GL 173
            L+ SG +  +   + +A      +  IT + +S  A  A +V+     PE  P    G 
Sbjct: 125 ALTVSGKTPWVWGAMRHAWSLGAVVAVITGDAQSEAAQLASMVIA----PELGPDVVAGY 180

Query: 174 APTTSAIMQ 182
             T + I Q
Sbjct: 181 GNTKAGIAQ 189


>gi|225174380|ref|ZP_03728379.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Dethiobacter alkaliphilus AHT 1]
 gi|225170165|gb|EEG78960.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Dethiobacter alkaliphilus AHT 1]
          Length = 608

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 3/86 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++  D L++V+S SG + +  A +  AR+   P++AIT+   S V+  AD VL     PE
Sbjct: 336 LLGEDTLVVVISQSGETADTLAAMRLARQKGSPVVAITNVVGSTVSREADRVLYTWAGPE 395

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIAL 193
                +A T +   QL +   LA+ L
Sbjct: 396 IA---VASTKAYTTQLVVLYLLALQL 418


>gi|283786176|ref|YP_003366041.1| N-acetylmuramic acid 6-phosphate etherase [Citrobacter rodentium
           ICC168]
 gi|282949630|emb|CBG89249.1| N-acetylmuramic acid 6-phosphate etherase [Citrobacter rodentium
           ICC168]
          Length = 297

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 51/126 (40%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   AS    T             G P   + A E +  +  +   
Sbjct: 63  GRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDNPQLGED 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         DL++ L+ SG +  +   L YAR      +A++    S VA  ADI ++ 
Sbjct: 123 DLIALNLRPQDLVVGLAASGRTPYVIGGLKYARTSGCATVAVSCNPDSPVAQEADIAISP 182

Query: 163 PKEPES 168
              PE+
Sbjct: 183 VVGPEA 188


>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
 gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
          Length = 155

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 27/124 (21%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------------RNF 276
           D   +L + + G + VVDE  K+ GII+E DI                         +N 
Sbjct: 26  DVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKKEKYIEPPRVINFLQGLIFLDDMKNL 85

Query: 277 HKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            KDL  ++   VED+M ++   + ED        ++ + +I+ + VVDD  K  GI+   
Sbjct: 86  EKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANVMIKKSINRVPVVDDDGKIKGIICRY 145

Query: 334 DLLR 337
           D+++
Sbjct: 146 DIIK 149


>gi|157363922|ref|YP_001470689.1| signal transduction protein [Thermotoga lettingae TMO]
 gi|157314526|gb|ABV33625.1| putative signal transduction protein with CBS domains [Thermotoga
           lettingae TMO]
          Length = 148

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 23/120 (19%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKDLNTL---- 283
           + + I+S +    + VV E  ++ G I+E DI R             +F  D+N      
Sbjct: 22  NVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRATVPSYFSLLQSASFIPDMNQFLRNA 81

Query: 284 ------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V + M   P V+ E   L     ++ +HNI V+ VVDD  + +G++   ++L+
Sbjct: 82  KLVKDKPVFEYMSSPPIVVNEHANLIHVADIMIRHNIKVIPVVDDLGRLVGMIGRTNILK 141


>gi|149188400|ref|ZP_01866693.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
 gi|148837618|gb|EDL54562.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
          Length = 635

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAM 306
           KR     V D G KL G++T+ D+ +    +   N+  + DVM  NP  +  + L+  A 
Sbjct: 199 KRSSTAVVCDNG-KLVGLMTDRDMTKRVIAEGHDNSAPIRDVMTPNPLTVSPNDLVLHAA 257

Query: 307 QLLRQHNISVLMVVDD 322
            L+ QHN+  L VV +
Sbjct: 258 SLMMQHNVRGLPVVSE 273


>gi|325970898|ref|YP_004247089.1| hypothetical protein SpiBuddy_1070 [Spirochaeta sp. Buddy]
 gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Spirochaeta sp. Buddy]
          Length = 147

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 13/94 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+  L+E + G + V++E   +KGI++E DI R+F K L  L+   + ++         +
Sbjct: 27  ALLKLTEHKIGALLVLNEQGDIKGILSERDIIRHFSKRLEHLNTASIKVRE--------V 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T  +  ++ H  S     +DC   +   HF  L
Sbjct: 79  MTTGVTYVKPHQSS-----EDCLHLMTAGHFRHL 107


>gi|293391133|ref|ZP_06635467.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290951667|gb|EFE01786.1| N-acetylmuramic acid 6-phosphate etherase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 304

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 25/142 (17%)

Query: 52  QFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFV----------- 96
           Q   AVE+I A     GR+V  G G SG +G   AS    T G PS  V           
Sbjct: 54  QIAQAVERIVAAFQAGGRLVYLGAGTSGRLGVLDASECPPTFGVPSGMVVGLIAGGETAL 113

Query: 97  -HAAEASHGDLGMITRD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            +A E +  +     +D         D+++ ++ SG +  +   L YA++     +++ S
Sbjct: 114 RNAVEGAEDNAAAGEQDLRHINFSAKDVLVGIAASGRTPYVIGGLNYAKQLGATTVSLVS 173

Query: 147 ENKSVVACHADIVLTLPKEPES 168
              +V++  ADI +T    PE+
Sbjct: 174 NPNAVMSDIADIAITTAVGPEA 195


>gi|218248479|ref|YP_002373850.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8801]
 gi|218168957|gb|ACK67694.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8801]
          Length = 903

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VV+E   L GII+  D+    H   +   V+  M ++ K I  +TLL     
Sbjct: 347 RYGHSGLSVVNENDILVGIISRRDLDLALHHGFSHAPVKGYMTRHLKTITPETLLPEIES 406

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  ++I  L VV +  K +GIV   DLLR
Sbjct: 407 IMVTYDIGRLPVV-EGDKLLGIVTRTDLLR 435


>gi|160875862|ref|YP_001555178.1| CBS domain-containing protein [Shewanella baltica OS195]
 gi|160861384|gb|ABX49918.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS195]
 gi|315268053|gb|ADT94906.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS678]
          Length = 615

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 6/99 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIKNPKVILE 298
           A  ++   R   + V D   KL GI+T+ D+ RN    +     ++V   M  +P  I  
Sbjct: 172 AALLMRNSRVSSLLVTD-NHKLVGILTDKDL-RNRVLAVGLDGHIAVHQAMTVSPISISS 229

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 230 NALIFEAMLLMSEHNIHHLPIIDQ-DKAIGMVTSTDILR 267


>gi|91212450|ref|YP_542436.1| hypothetical protein UTI89_C3458 [Escherichia coli UTI89]
 gi|110643270|ref|YP_671000.1| phosphosugar isomerases [Escherichia coli 536]
 gi|117625338|ref|YP_854641.1| putative phosphosugar isomerases [Escherichia coli APEC O1]
 gi|215488357|ref|YP_002330788.1| predicted transcriptional regulator [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218560109|ref|YP_002393022.1| bifunctional protein: transcriptional regulator and sugar phosphate
           isomerase [Escherichia coli S88]
 gi|237706218|ref|ZP_04536699.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|306816623|ref|ZP_07450755.1| putative bifunctional transcriptional regulator/sugar phosphate
           isomerase [Escherichia coli NC101]
 gi|312968632|ref|ZP_07782841.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|331659315|ref|ZP_08360257.1| putative transcriptional regulator [Escherichia coli TA206]
 gi|91074024|gb|ABE08905.1| hypothetical protein UTI89_C3458 [Escherichia coli UTI89]
 gi|110344862|gb|ABG71099.1| hypothetical phosphosugar isomerases [Escherichia coli 536]
 gi|115514462|gb|ABJ02537.1| putative phosphosugar isomerases [Escherichia coli APEC O1]
 gi|215266429|emb|CAS10867.1| predicted transcriptional regulator [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218366878|emb|CAR04648.1| putative bifunctional protein: transcriptional regulator and sugar
           phosphate isomerase [Escherichia coli S88]
 gi|226899258|gb|EEH85517.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|294490808|gb|ADE89564.1| SIS domain protein [Escherichia coli IHE3034]
 gi|305850188|gb|EFM50647.1| putative bifunctional transcriptional regulator/sugar phosphate
           isomerase [Escherichia coli NC101]
 gi|307625362|gb|ADN69666.1| putative bifunctional protein: transcriptional regulator and sugar
           phosphate isomerase [Escherichia coli UM146]
 gi|312286850|gb|EFR14761.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|315288806|gb|EFU48204.1| SIS domain protein [Escherichia coli MS 110-3]
 gi|315297709|gb|EFU56986.1| SIS domain protein [Escherichia coli MS 16-3]
 gi|323951444|gb|EGB47319.1| SIS domain-containing protein [Escherichia coli H252]
 gi|323957816|gb|EGB53530.1| SIS domain-containing protein [Escherichia coli H263]
 gi|331053897|gb|EGI25926.1| putative transcriptional regulator [Escherichia coli TA206]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|330468206|ref|YP_004405949.1| cbs domain-containing membrane protein [Verrucosispora maris
           AB-18-032]
 gi|328811177|gb|AEB45349.1| cbs domain containing membrane protein [Verrucosispora maris
           AB-18-032]
          Length = 233

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 20/121 (16%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--------------------RNF 276
            P    + +L+E+R   V VVD+   + G+++E D+                     R  
Sbjct: 21  TPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLLHKVEWMGEPHERRVFEGARQRRS 80

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     +  ++M          T L  A +L+ +  +  L VVDD  + +GIV   DLL
Sbjct: 81  RRKGEADNARELMTTPAVTTSPHTSLVAAAKLMDREQVKRLPVVDDMGRVVGIVTRSDLL 140

Query: 337 R 337
           R
Sbjct: 141 R 141


>gi|319442948|ref|ZP_07992104.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium variabile
           DSM 44702]
          Length = 516

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD    L GI T  D+   F +D +   V DVM   P ++ E+ +    A++L
Sbjct: 137 RISGLPVVDAEGMLVGICTNRDM--RFEEDFSA-KVADVMTPMPLIVAEEGVSADAALRL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L QH +  L +V+   K  G++   D  +
Sbjct: 194 LSQHKVEKLPIVNGAGKLTGLITVKDFAK 222


>gi|261492510|ref|ZP_05989063.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496785|ref|ZP_05993159.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307532|gb|EEY08861.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311669|gb|EEY12819.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 288

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+++  K R+ + G+G SG         L   G  +  V      +    ++   DL+I
Sbjct: 129 VEELRKAK-RIFLFGVGSSGLTAEDAKHKLMRIGLQTDAVTNNHFMYMQAALVKEGDLVI 187

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
            +S SG S+E+   L ++R      +AIT   +S V   A+ VL
Sbjct: 188 GISHSGYSEEIVKSLRFSRANKATTVAITHNLRSPVTEEANYVL 231


>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
 gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
           Group]
 gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
 gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
 gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
 gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
 gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
          Length = 235

 Score = 37.4 bits (85), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 29/145 (20%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D M   + + +VK    + +A+ +L E R     V+D+   L G++++ D+         
Sbjct: 78  DFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYDLLALDSISGN 137

Query: 273 --------------FRNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                         ++ F++    LS      + DVM   P V+ E T L  A +LL + 
Sbjct: 138 GLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNLEDAARLLLET 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
               L VVD   K +GI+   +++R
Sbjct: 198 KYRRLPVVDSSGKLVGIITRGNVVR 222


>gi|325971923|ref|YP_004248114.1| hypothetical protein SpiBuddy_2099 [Spirochaeta sp. Buddy]
 gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Spirochaeta sp. Buddy]
          Length = 214

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 59/110 (53%), Gaps = 13/110 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------NFHKD---LNTLSVEDV 288
           +A  ++ +++   + V+D+ +KL GIITE DI           + H+    L+ L+V+ +
Sbjct: 22  EASALMKQEKVHRLPVLDKEKKLVGIITEKDILYATPSPASSLSIHEMAYLLSKLTVKKL 81

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M KN   I +DT +  A +++   ++S L V+ +  K IGIV   D+ + 
Sbjct: 82  MSKNVVTINKDTTVEEAARMMVDQDLSSLPVL-EGDKLIGIVTKSDMFKI 130


>gi|284161808|ref|YP_003400431.1| 6-phospho 3-hexuloisomerase [Archaeoglobus profundus DSM 5631]
 gi|284011805|gb|ADB57758.1| 6-phospho 3-hexuloisomerase [Archaeoglobus profundus DSM 5631]
          Length = 212

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 90/215 (41%), Gaps = 25/215 (11%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           Y S F S+  +G S +   T+   L  +      + +++S+L  +   +F  A+E  + I
Sbjct: 9   YKSKFSSILAQGGSQVVGETLIRFLDKVCEH---VQNIKSNLDFKKIEEFISALENARCI 65

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
                + G G+SG +    A  L   G   + V            I  +DL+I +S SG 
Sbjct: 66  ----FVMGAGRSGFVAKAFAMRLMHLGYNVYVVGETVTPR-----IKPEDLLIAISGSG- 115

Query: 124 SDELKAILYYARR----FSIPLIAITSENKSVVACHADIVLTLP-KEPESCPH---GLAP 175
             E  +++  +RR        L+AIT   +S +A  +DIV+ L  K+     H    LAP
Sbjct: 116 --ETLSVVNISRRAKEDIGSKLVAITQRPESTLAKMSDIVIVLKGKDKYERNHELSKLAP 173

Query: 176 --TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             T   +  L   D L   ++  +  +E D    H
Sbjct: 174 LGTLFELTALIFLDGLVAEIMNLKQLTEEDLAERH 208


>gi|255767340|ref|NP_389378.2| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|296331070|ref|ZP_06873544.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674225|ref|YP_003865897.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|321315257|ref|YP_004207544.1| putative oxidoreductase [Bacillus subtilis BSn5]
 gi|264664572|sp|O34682|YLBB_BACSU RecName: Full=Uncharacterized protein ylbB
 gi|225184967|emb|CAB13368.2| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484044|dbj|BAI85119.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
           BEST195]
 gi|296151714|gb|EFG92589.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412469|gb|ADM37588.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|320021531|gb|ADV96517.1| putative oxidoreductase [Bacillus subtilis BSn5]
          Length = 148

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 237 CPLID----AITILSEKRFGCVAVVDE-GQKLKGIITEGD-IFRNFH-KDLNTLSVEDVM 289
           C ++D    A   + +   G + VVDE G+ L GI+T+ D + R    K  N+  + D M
Sbjct: 15  CTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + P  + ED  +   + L+  H +  + V  + +K  GIV   DL
Sbjct: 75  TEKPVSVEEDASVDEVLHLMASHQLRRIPVTKN-KKLTGIVTLGDL 119


>gi|86159426|ref|YP_466211.1| signal-transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775937|gb|ABC82774.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 139

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+ +A  ++SE++ G VAV D G ++ G++TE D+         D N    E +    P
Sbjct: 19  APIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGADANHPMREAMRQGLP 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V    + + VA  L+R H    L+V +  Q  +G+V   D+++ 
Sbjct: 78  RVSTSASEVEVA-GLMRDHTTRHLLVEEGGQ-VVGVVSMRDIIQL 120


>gi|81300905|ref|YP_401113.1| diguanylate cyclase with GAF sensor [Synechococcus elongatus PCC
           7942]
 gi|81169786|gb|ABB58126.1| diguanylate cyclase with GAF sensor [Synechococcus elongatus PCC
           7942]
          Length = 664

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 228 DSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLS 284
           D  PL V    P+   + ++  +    V +++  Q L GI TE D+ R       + +  
Sbjct: 14  DRQPLTVAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIGITITSTP 73

Query: 285 VEDVMIKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHF---------L 333
           +E+V       I E  +  V   + L RQ+N+  L VV+   + IGI+ +         +
Sbjct: 74  IEEVATSTVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGIRRLLKPI 133

Query: 334 DLLRF 338
           DLLR 
Sbjct: 134 DLLRL 138


>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
           21]
 gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
           [Sphingobacterium sp. 21]
          Length = 142

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPKVIL 297
           A+ I+ EK    + VVD+G  L GI TE D  R          NT ++ +VM  NP  + 
Sbjct: 27  ALRIMMEKNISALLVVDQGVLL-GIFTERDYARKIILKGRASANT-AIHEVMTSNPHTVG 84

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +   MQL+   +   L +V++    IGI+   DL+++
Sbjct: 85  PNHSIDHCMQLMTDRHFRHLPIVENGN-LIGIISIGDLVKY 124


>gi|153830692|ref|ZP_01983359.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148873812|gb|EDL71947.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|257057124|ref|YP_003134956.1| inosine 5-monophosphate dehydrogenase [Saccharomonospora viridis
           DSM 43017]
 gi|256586996|gb|ACU98129.1| IMP dehydrogenase family protein [Saccharomonospora viridis DSM
           43017]
          Length = 479

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 231 PLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG-----DIFRNFHKDLNTLS 284
           PLV   G  + DA+ ++ ++  G VAVVD+  +  GI+TE      D F    + L  L 
Sbjct: 99  PLVLTAGDAVADAMNLVGKRSHGAVAVVDDDGRPLGIVTEAACADVDRFARLSEVLERLV 158

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +   +   P+ + E          L Q    + + VDD  +  G++  +  LR GI
Sbjct: 159 LTVPLDTPPREVYEQ---------LHQRGEKLALGVDDNGRLAGVLTQVGALRSGI 205


>gi|168028206|ref|XP_001766619.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682051|gb|EDQ68472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVMIKN 292
           G  + DA   ++ +R     + D    L GIIT+ D+  R   + L     SV  VM +N
Sbjct: 19  GTTVADACRRMATRRVDAALLTDSNALLCGIITDKDVAIRIIAEGLKPEETSVSKVMTRN 78

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  ++ DTL   A+Q + Q     L VV+  +    +V  LD+ +
Sbjct: 79  PTFVMGDTLAVEALQKMVQGRFRHLPVVEHGE----VVALLDITK 119


>gi|88860517|ref|ZP_01135155.1| hypothetical protein PTD2_15872 [Pseudoalteromonas tunicata D2]
 gi|88817715|gb|EAR27532.1| hypothetical protein PTD2_15872 [Pseudoalteromonas tunicata D2]
          Length = 406

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)

Query: 279 DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL  ++VEDVMI   ++I   + D   ++  QL    +  VL+  D    A+G +H  D 
Sbjct: 182 DLEQVTVEDVMIPRNEIIAIDINDEWKSIMKQLTHAQHTRVLLYRDQIDDAVGFIHSRDA 241

Query: 336 LRF 338
           LR 
Sbjct: 242 LRL 244


>gi|170681276|ref|YP_001745297.1| iron transport system regulatory protein FitR [Escherichia coli
           SMS-3-5]
 gi|191172558|ref|ZP_03034098.1| iron transport system regulatory protein FitR [Escherichia coli
           F11]
 gi|331648823|ref|ZP_08349911.1| putative transcriptional regulator [Escherichia coli M605]
 gi|170518994|gb|ACB17172.1| iron transport system regulatory protein FitR [Escherichia coli
           SMS-3-5]
 gi|190907226|gb|EDV66825.1| iron transport system regulatory protein FitR [Escherichia coli
           F11]
 gi|281180076|dbj|BAI56406.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|323188536|gb|EFZ73821.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           RN587/1]
 gi|324011971|gb|EGB81190.1| SIS domain protein [Escherichia coli MS 60-1]
 gi|330909089|gb|EGH37603.1| hypothetical phosphosugar isomerase [Escherichia coli AA86]
 gi|331042570|gb|EGI14712.1| putative transcriptional regulator [Escherichia coli M605]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|300934270|ref|ZP_07149526.1| hypothetical protein CresD4_09379 [Corynebacterium resistens DSM
           45100]
          Length = 617

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 53/99 (53%), Gaps = 3/99 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILED 299
           DA  ++++ R   + ++D   KL GI+T+ D+ +    +   + +V ++M K       D
Sbjct: 173 DAAKMMNDLRVSSLLIID-NDKLVGIVTDRDMRKVVANNTPVSTTVAEIMPKKLVTRSSD 231

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T++  AM L+ + +I  L VVDD  +  GIV   D++R 
Sbjct: 232 TVVIEAMVLMAERDIHHLPVVDDG-RVTGIVTAADIMRL 269


>gi|291482553|dbj|BAI83628.1| D-fructose-6-phosphate amidotransferase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 50/120 (41%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIIGCGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LA+
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAV 411


>gi|161502273|ref|YP_001569385.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863620|gb|ABX20243.1| hypothetical protein SARI_00303 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VITG+G SG +    A  L   G  +       A    +  +   DL++ +S+SG   
Sbjct: 134 RIVITGMGASGLVAQNFAWKLLKIGVNAGVERDMHALLSTVQALAPGDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ELK       R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELKLAADETLRTGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|254361286|ref|ZP_04977429.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           PHL213]
 gi|153092782|gb|EDN73825.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           PHL213]
          Length = 289

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           VE+++  K R+ + G+G SG         L   G  +  V      +    ++   DL+I
Sbjct: 130 VEELRKAK-RIFLFGVGSSGLTAEDAKHKLMRIGLQTDAVTNNHFMYMQAALVKEGDLVI 188

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
            +S SG S+E+   L ++R      +AIT   +S V   A+ VL
Sbjct: 189 GISHSGYSEEIVKSLRFSRANKATTVAITHNLRSPVTEEANYVL 232


>gi|152970649|ref|YP_001335758.1| putative transcriptional regulator [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238895148|ref|YP_002919883.1| putative transcriptional regulator [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330012758|ref|ZP_08307483.1| SIS domain protein [Klebsiella sp. MS 92-3]
 gi|150955498|gb|ABR77528.1| putative transcriptional regulator [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238547465|dbj|BAH63816.1| putative transcriptional regulator [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
 gi|328533718|gb|EGF60411.1| SIS domain protein [Klebsiella sp. MS 92-3]
          Length = 300

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A   +  G P++ ++    S  + L  + R D++I++      
Sbjct: 146 QVGIFGIGASGILAEYTARLFSRIGLPAYVMNRTGFSLAEQLIGLQRGDVLIMMGQKSPH 205

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            E    L  A+R  IP I +T    S  +  A +V+ +P+  +S 
Sbjct: 206 REGLTTLREAKRLGIPTILLTQAVDSRFSQEAQVVIDVPRGGDSS 250


>gi|90408875|ref|ZP_01217014.1| putative formate transporter 1 [Psychromonas sp. CNPT3]
 gi|90310014|gb|EAS38160.1| putative formate transporter 1 [Psychromonas sp. CNPT3]
          Length = 467

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +N  K LN   V+D+M  NP  + E   +  A+  +  + IS   V+D+ ++ +G +   
Sbjct: 292 KNTQKTLNDFLVKDLMQSNPLTLTEQQTIYQALSFIVDNKISSAPVLDENKQLVGFISEQ 351

Query: 334 DLLR 337
           D+LR
Sbjct: 352 DILR 355


>gi|269792609|ref|YP_003317513.1| inosine-5'-monophosphate dehydrogenase [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100244|gb|ACZ19231.1| inosine-5'-monophosphate dehydrogenase [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 491

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA+ ++S      V +VDE  +L GIIT  D+   F  D    ++ +VM K+  V     
Sbjct: 112 DAVDLMSHYHISGVPIVDEKLRLVGIITNRDL--RFVTDYGQ-AISEVMTKDGLVTAPVG 168

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A  +L +H I  L +VD   K  G++   D+ +
Sbjct: 169 TTLDDAKDILMRHKIEKLPIVDGEGKLKGLITIKDIQK 206


>gi|13620222|emb|CAC36398.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A+  + + R  CV VVD    L+GI+T GD+ R+  K+    S +D+ + +    L  +
Sbjct: 595 EALECMHDGRQSCVLVVDAEGYLEGILTYGDVKRSLFKNHGDSSNKDLSVTDANTCLVSS 654

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + T  +   R  +  +L    D   AI
Sbjct: 655 ICTKGIS-YRGQDCGLLTCYPDTDLAI 680


>gi|331674572|ref|ZP_08375332.1| putative transcriptional regulator [Escherichia coli TA280]
 gi|331068666|gb|EGI40061.1| putative transcriptional regulator [Escherichia coli TA280]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|269959149|ref|YP_003328938.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
           Israel]
 gi|269848980|gb|ACZ49624.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
           Israel]
          Length = 493

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVI 296
           L  A++++ +  +  + VV   Q KL GI+T  D+   F ++ N   V D+M   N   +
Sbjct: 107 LSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDV--RFVENKN-CKVSDIMTSTNLVTV 163

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 164 CEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 205


>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
 gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 220

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLN 281
           K    ++ A  ++ E  +G + VVD+  +L GIIT+ D+                +  L+
Sbjct: 15  KATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V D+M K    +  D  +  A  L+ +HN+  + VVD     +G++   D+ +
Sbjct: 75  EIKVGDIMTKTVISVSPDDTVEKAAVLMLRHNVGGMPVVDAKGLVVGVITDSDIFK 130


>gi|313124950|ref|YP_004035214.1| cbs domain-containing protein [Halogeometricum borinquense DSM
           11551]
 gi|312291315|gb|ADQ65775.1| CBS domain-containing protein [Halogeometricum borinquense DSM
           11551]
          Length = 281

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 10/120 (8%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFH 277
           +D M   + +  V++     D +  L E+ F  V VV   D+G+  +GI+T  D+    H
Sbjct: 4   ADAMTPREDVVTVELPGTRDDVLEYLQERGFSSVPVVKRTDDGEAYRGIVTRQDLIE--H 61

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D N L+   V++ +      DT +     ++ + N   + VVD   +  GI+   D++R
Sbjct: 62  PDENQLA---VLMNDVPTTTADTSVEDVAHMMVEKNARRVPVVDGTLE--GIITVTDVIR 116


>gi|148244576|ref|YP_001219270.1| IMP dehydrogenase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326403|dbj|BAF61546.1| IMP dehydrogenase [Candidatus Vesicomyosocius okutanii HA]
          Length = 486

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 6/107 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           + +   + D + +  +     + VV EG  +KG++T  D+   F   LN L V++VM   
Sbjct: 99  ISLKATIADVLKMQQQYNISALPVV-EGNTIKGLVTGRDV--RFKTRLNEL-VKNVMTPQ 154

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K+I   E T +     LL++H I  +++ DD     G+++  D+ +
Sbjct: 155 NKLITVKEGTNINKVRSLLQKHRIERIIITDDTFNLKGMINVSDIQK 201


>gi|30018995|ref|NP_830626.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 14579]
 gi|229126251|ref|ZP_04255269.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-Cer4]
 gi|29894537|gb|AAP07827.1| Transcriptional regulator, RpiR family [Bacillus cereus ATCC 14579]
 gi|228657243|gb|EEL13063.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-Cer4]
          Length = 287

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 3/84 (3%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPE 167
           +  DD+ + +S SG + ++  +  YA+R    +I IT  +  S +   ADI L +P   +
Sbjct: 178 LKEDDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEADIRLCMPDVEQ 237

Query: 168 SCPHGLAPTTSAIMQLAIGDALAI 191
              H +A   S + QL + DAL +
Sbjct: 238 D--HRIASIASRMTQLNMIDALYV 259


>gi|297581637|ref|ZP_06943559.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534044|gb|EFH72883.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTS 178
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA 247


>gi|301017259|ref|ZP_07182038.1| SIS domain protein [Escherichia coli MS 69-1]
 gi|300400318|gb|EFJ83856.1| SIS domain protein [Escherichia coli MS 69-1]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|281202713|gb|EFA76915.1| hypothetical protein PPL_09667 [Polysphondylium pallidum PN500]
          Length = 320

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 55/112 (49%), Gaps = 14/112 (12%)

Query: 240 IDAITILSEKRFGCVAVVDEGQK---------LKGIITEGDIFRNFH----KDLNTLSVE 286
           ++A  +++EKR   +AVVDE Q+         LK ++ E  IF N +    + ++ +  +
Sbjct: 196 LEAFQLMTEKRVTGIAVVDEKQQILANISARDLKELLNETRIFENLYLSVGEFISKVRQQ 255

Query: 287 DVMIKNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D    NP +   +D  L   M  +    I  + +V++ +K +G+V   D+L 
Sbjct: 256 DYKAVNPSICCTKDESLRKLMTRMAAAKIHRVYMVNNDRKLVGVVSLHDILE 307


>gi|253735059|ref|ZP_04869224.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253726955|gb|EES95684.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 266

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  V+  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HVLFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|262197395|ref|YP_003268604.1| inosine-5'-monophosphate dehydrogenase [Haliangium ochraceum DSM
           14365]
 gi|262080742|gb|ACY16711.1| inosine-5'-monophosphate dehydrogenase [Haliangium ochraceum DSM
           14365]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.5,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 17/192 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG----- 211
           D VL LP E    P  +  +T     + +G  L  A +++   S     +   GG     
Sbjct: 14  DDVLLLPAESRVLPRDVDVSTRLTTDIELGIPLVSAAMDTVTESATAIRMAREGGIGIVH 73

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLID-------AITILSEKRFGCVAVVD-EGQKL 263
           K  T+   A +V+    +   + +    +D       AI I+   R   + VVD EG+ L
Sbjct: 74  KNLTVEEQALEVVRVKKAESGIVVDPVTVDPERTVEGAIEIMRTHRISGLPVVDGEGRPL 133

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T  D+   F ++L+   V +VM K    + E   L  + +LL ++ I  L+VVD  
Sbjct: 134 -GILTNRDV--RFERNLDQ-RVGEVMTKRLITVREGVSLEESKELLHENRIEKLLVVDAE 189

Query: 324 QKAIGIVHFLDL 335
            +  G++   D+
Sbjct: 190 GRLRGLITIKDI 201


>gi|325290283|ref|YP_004266464.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965684|gb|ADY56463.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 139

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           L D   I+ E+  G V V  EG +L GIIT+ DI        KDL       VM  +P  
Sbjct: 20  LSDIAKIMKEQDIGAVPVC-EGDRLLGIITDRDIIVRAVSEKKDLQKTLARQVMTLDPIC 78

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           I E   ++ A  L+ ++ +  L V+    K +GI+   DL
Sbjct: 79  IEEKDSISQAADLMAEYQVKRLPVL-KSGKLVGIITLGDL 117


>gi|302391225|ref|YP_003827045.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Acetohalobium arabaticum DSM 5501]
 gi|302203302|gb|ADL11980.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Acetohalobium arabaticum DSM 5501]
          Length = 394

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 11/99 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIIT--EGDIFRNFHKDLNT---LSVEDVMIKNPKV 295
           D I I+++ +   +   +E      I+T  E D  + F +D+N    L+ ED+M K   +
Sbjct: 232 DRIAIMNDGKIVQIGTPEE------ILTDAENDYVKEFVQDVNRSRILTAEDIMTKPLAL 285

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +      AM  +RQ+ IS + VVD  +K  GIV   D
Sbjct: 286 LYDQDGPHTAMHKMRQNEISSIFVVDKERKLKGIVEIED 324


>gi|297619452|ref|YP_003707557.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297378429|gb|ADI36584.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 412

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 49/98 (50%), Gaps = 12/98 (12%)

Query: 252 GCVAVVDEGQK----------LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
            C  +V+ GQ+          L GIIT+ DI         L  +SV+ +M KNP  I +D
Sbjct: 82  ACFDIVNSGQRVAPVYNSKNNLSGIITDYDIIEAVSTSELLKDVSVDMLMTKNPITIDKD 141

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  A  L+ ++ I  L+V+D+  +  GI+   D+++
Sbjct: 142 ENVGKAKNLMSKYGIGRLIVLDEEGEPEGIITEDDIIK 179


>gi|259047727|ref|ZP_05738128.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
 gi|259035918|gb|EEW37173.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
          Length = 267

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 25/99 (25%), Positives = 46/99 (46%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++   G+G SG + S L   L+  G    +   +      LG  T DDL+I +S+S  + 
Sbjct: 118 KIYTFGVGASGMVCSDLYFKLSRIGKNILYHTDSHIQLASLGSATPDDLVIGVSYSAQTK 177

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           E+ +    A    IP ++IT+   + +   +   L +P+
Sbjct: 178 EVTSAFEIAHSREIPTVSITALGNNQLDSLSTYSLKVPR 216


>gi|288549945|ref|ZP_06390856.1| N-acetylmuramic acid 6-phosphate etherase [Enterobacter
           cancerogenus ATCC 35316]
 gi|288317290|gb|EFC56228.1| N-acetylmuramic acid 6-phosphate etherase [Enterobacter
           cancerogenus ATCC 35316]
          Length = 283

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/126 (27%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHG--DLGM- 108
           GR++  G G SG +G   AS    T             G P   + A E +     LG  
Sbjct: 48  GRIIYMGAGTSGRLGVLDASECPPTFGVPHGLVVGLIAGGPGALLKAVEGAEDSKQLGED 107

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T  DL++ L+ SG +  +   L YAR+     +AI+    S +A  ADI ++ 
Sbjct: 108 DLKALNLTAQDLVVGLAASGRTPYVIGGLEYARQTGCTTVAISCNPGSPIAQVADIAISP 167

Query: 163 PKEPES 168
              PE+
Sbjct: 168 VVGPEA 173


>gi|58040690|ref|YP_192654.1| inosine-5'-monophosphate dehydrogenase [Gluconobacter oxydans 621H]
 gi|58003104|gb|AAW61998.1| Inosine-5'-monophosphate dehydrogenase [Gluconobacter oxydans 621H]
          Length = 497

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVI 296
           L +   I++      + V+++G   L GI+T  D+   F  D NT  V D+M  +N   +
Sbjct: 115 LAEVQAIMARHGVSGLPVIEDGSGVLVGILTNRDM--RFTTDPNT-RVRDLMTHENLVTV 171

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L       A  LL +H I  L+VVD+ ++ IG++   D+
Sbjct: 172 LNGAAPDEARTLLHRHRIEKLLVVDEAKRCIGLITVKDM 210


>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE---DVMIKNPKV 295
           +IDA+  ++  + G V VVDE     GI TE D+ R        +  E   D M +NP  
Sbjct: 23  MIDAVQGMAAFKVGAVLVVDEKDNTLGIFTERDVTRCLAAHGAPVLAEPVGDHMTRNPLT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +   M  +  H+   + V+D+ Q   GIV   DL+
Sbjct: 83  CQGSDTVASVMSTMSTHHFRHMPVMDNGQMK-GIVSIRDLV 122


>gi|330470080|ref|YP_004407823.1| inosine-5'-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
 gi|328813051|gb|AEB47223.1| inosine-5'-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
          Length = 520

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 12/93 (12%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV-----ILEDTLLTV 304
           R   V VVD   +L GI+T  D+   F  D  T  V D+M + P V     + +D     
Sbjct: 145 RISGVPVVDAEGQLVGIVTNRDM--RFVSDPAT-PVRDIMTQPPLVTAPVGVSKDE---- 197

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A+ LLRQH +  L +VD   K  G++   D  +
Sbjct: 198 ALGLLRQHKVEKLPIVDGSGKLRGLITVKDFTK 230


>gi|293416469|ref|ZP_06659108.1| hypothetical protein ECDG_03225 [Escherichia coli B185]
 gi|301020015|ref|ZP_07184147.1| SIS domain protein [Escherichia coli MS 196-1]
 gi|291431825|gb|EFF04808.1| hypothetical protein ECDG_03225 [Escherichia coli B185]
 gi|299881972|gb|EFI90183.1| SIS domain protein [Escherichia coli MS 196-1]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|331664640|ref|ZP_08365546.1| putative transcriptional regulator [Escherichia coli TA143]
 gi|284923050|emb|CBG36143.1| putative iron transport transcriptional regulator [Escherichia coli
           042]
 gi|331058571|gb|EGI30552.1| putative transcriptional regulator [Escherichia coli TA143]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|254796884|ref|YP_003081721.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str.
           Illinois]
 gi|254590120|gb|ACT69482.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str.
           Illinois]
          Length = 481

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 35/114 (30%), Positives = 54/114 (47%), Gaps = 18/114 (15%)

Query: 233 VKIGCPLID-AITILSEKRFG-CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV-- 288
           +++G P++  A+ +++E R   C+A      K  GI   G I RN   +   L +  V  
Sbjct: 34  IRLGVPIVSSAMDMVTEARLAICLA------KHGGI---GIIHRNMTPEAQALEIRKVKK 84

Query: 289 ----MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ++ +P  +  D  L     L RQH  S L VVD+  K IGI+   D +RF
Sbjct: 85  YESWIVSDPVTVSPDDRLEKISALKRQHGYSGLPVVDEKNKLIGILTNRD-VRF 137



 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           +  + VVDE  KL GI+T  D+   F +D +    E +  KN   + E      A  L  
Sbjct: 114 YSGLPVVDEKNKLIGILTNRDV--RFVEDGSRKVSELMTTKNLITVKEGITYDEARLLFH 171

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDL 335
           +H I  L+VVD+  + +G++   D+
Sbjct: 172 KHKIERLIVVDEEFRCVGLITVKDI 196


>gi|238753029|ref|ZP_04614486.1| Transcriptional regulator, RpiR family [Yersinia rohdei ATCC 43380]
 gi|238708750|gb|EEQ01011.1| Transcriptional regulator, RpiR family [Yersinia rohdei ATCC 43380]
          Length = 252

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 10/105 (9%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGSS 124
           R++  GIG SG +G   A   ++ G  S ++       + D+    +D + I+LS SG +
Sbjct: 119 RIIFVGIGTSGALGKYSARFFSNIGKYSTYIDDPYYPINSDM---YQDAVAIILSVSGET 175

Query: 125 DELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           +E+  I   A +FS+    +I++T+ + S +A  AD  ++    P
Sbjct: 176 EEIIRI---ANQFSLQNCKIISLTNSDNSTLAKMADFNISYHMPP 217


>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
 gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
          Length = 144

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 3/56 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNP 293
           +A  IL+E+R G + V  +G+ + GII+E DI R+         T +V ++M +NP
Sbjct: 26  EAAQILAERRIGGLVVSRDGETVDGIISERDIVRSLAVRGVVCMTETVSEMMTRNP 81


>gi|297196332|ref|ZP_06913730.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153173|gb|EFH32186.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 142

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-- 278
           +VM +G  +  V+    L++A  ++ +   G V V D G  + G++T+ DI  R+  +  
Sbjct: 7   EVMTAG--VAAVRPDASLVEAARLMRDLDIGDVLVAD-GDTVVGMLTDRDITLRSVAEGA 63

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D   +S       +P  +  D  +  A++L+R H +  L VV+D  + +G+V   DL
Sbjct: 64  DPAGVSASSACTPDPVCVTPDDSVASAVRLMRTHAVRRLPVVED-GRPLGVVSLGDL 119


>gi|229059934|ref|ZP_04197308.1| RpiR family transcriptional regulator [Bacillus cereus AH603]
 gi|228719347|gb|EEL70951.1| RpiR family transcriptional regulator [Bacillus cereus AH603]
          Length = 284

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  A I L T  +E
Sbjct: 176 GLLTKEAVVIAISHSGSNKGLLEALEVAKAKGAHIIAITSYQKSALSQLAHITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|187780015|ref|ZP_02996488.1| hypothetical protein CLOSPO_03611 [Clostridium sporogenes ATCC
           15579]
 gi|187773640|gb|EDU37442.1| hypothetical protein CLOSPO_03611 [Clostridium sporogenes ATCC
           15579]
          Length = 281

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 14/140 (10%)

Query: 57  VEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFF-----VHAAEASHGDLGMI 109
           +E ++AIK    + + G+G S  +       L        F     +  A A H     I
Sbjct: 120 LEAVEAIKNAETIYLYGVGASAMVAMDFQYKLLRINKKVMFQLDSHLQLAVAVH-----I 174

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T  D+ + +S+SG++ E+   +  A++     IAIT   KS ++  ADI L +P   +  
Sbjct: 175 TNRDVAVAISYSGNTKEVNLAIEEAKKNGATTIAITKCGKSNLSNIADINLNIPSIEKDL 234

Query: 170 PHGLAPTTSAIMQLAIGDAL 189
             G    +S   QL + D+L
Sbjct: 235 RIG--AISSRTSQLFVTDSL 252


>gi|15920377|ref|NP_376046.1| hypothetical protein ST0198 [Sulfolobus tokodaii str. 7]
 gi|15621159|dbj|BAB65155.1| 195aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 195

 Score = 37.4 bits (85), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G+V++ G G+SG +G   A  L   G  ++ +         +  I   D+ I +S SG 
Sbjct: 36  NGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVL-----GETIVPAIGEKDIAIAISGSGR 90

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           +  +      A+     LIAITS + S +A  AD+V+ +P
Sbjct: 91  TKLILTAAEAAKEAKATLIAITSYSDSPIAKIADVVVEIP 130


>gi|258424629|ref|ZP_05687506.1| sugar isomerase [Staphylococcus aureus A9635]
 gi|257845224|gb|EEV69261.1| sugar isomerase [Staphylococcus aureus A9635]
          Length = 266

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        ++++ D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSQSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|227873503|ref|ZP_03991752.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Oribacterium sinus F0268]
 gi|227840677|gb|EEJ51058.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Oribacterium sinus F0268]
          Length = 625

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           E S++     EK      RV +   G + H G  L S   S       V  A     +  
Sbjct: 293 EFSYEAFSMTEKDFQEISRVRVIACGSAYHAGWVLKSVCESLARVPVQVELASEFRYNHP 352

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++ + +L+I +S SG + +  A L  A++     ++I +   S +A  +D V      PE
Sbjct: 353 ILEKGELVISISQSGETADTLAALKEAKKLGAKTLSIVNVKGSAIARESDFVFYTQAGPE 412

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALL---------ESRNFSENDFYVLHPG 210
                +A T +   QLA G   ++ L          E+R+ +E  F  L PG
Sbjct: 413 IA---VATTKAYSCQLAAGYIFSLLLAKAKGKISKEETRSLTEELF--LLPG 459


>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 142

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 4/89 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+IDA+ ++++K  G V V+  G +L GI++E D  R      +      V  +M    
Sbjct: 22  APVIDAVRLMADKSIGAVLVM-RGGELAGILSERDYARKIVLQGRSSADTPVRAIMTAEV 80

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDD 322
             +  DT +   MQL+ +  I  L V+ D
Sbjct: 81  VTVAPDTTVPACMQLVTERRIRHLPVLAD 109


>gi|300717981|ref|YP_003742784.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
 gi|299063817|emb|CAX60937.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
          Length = 279

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 32/142 (22%), Positives = 65/142 (45%), Gaps = 6/142 (4%)

Query: 57  VEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           +E ++ I+   R+V+ GIG SG +    +  L   G  +       A    +  +   DL
Sbjct: 120 LETLRLIRSANRIVLVGIGASGLVAKDFSWKLMKIGINAVAEQDMHALLASVQALNPGDL 179

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ +S++G   E+      A+R    ++A T     ++  C    + T+ +E  +    +
Sbjct: 180 LLAISYTGERREINLAAQEAQRAGANVLAFTGFTPNTLQQCATHCLYTVAEEQTTRSAAI 239

Query: 174 APTTSAIMQLAIGDALAIALLE 195
           + TT+   QL + D L +AL++
Sbjct: 240 SSTTA---QLTLTDLLFMALVQ 258


>gi|292654232|ref|YP_003534129.1| hypothetical protein HVO_0055 [Haloferax volcanii DS2]
 gi|291371816|gb|ADE04043.1| conserved protein [Haloferax volcanii DS2]
          Length = 284

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 9/120 (7%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFH 277
           +D M  G+ +  V +     D +  L E+ F  V VV   DEG K +G+I+  D+    H
Sbjct: 4   ADAMTRGEEVVTVSLPGTRDDVLEYLQERGFSSVPVVKETDEGTKYRGLISREDLIE--H 61

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D + L+V  ++ + P    +D L  VA  ++ +    + +V  D     GI+   D++R
Sbjct: 62  PDEDQLAV--LVREVPTASADDDLEAVAATMVSEGARRIPVV--DGDAIEGILTVTDVVR 117


>gi|262275579|ref|ZP_06053388.1| Signal transduction protein [Grimontia hollisae CIP 101886]
 gi|262219387|gb|EEY70703.1| Signal transduction protein [Grimontia hollisae CIP 101886]
          Length = 614

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 21/80 (26%), Positives = 45/80 (56%), Gaps = 3/80 (3%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLR 310
           C  V+D+G  L GI+++ ++      +   +S  + DVM  +P  + +D L+  A+ L+ 
Sbjct: 183 CALVLDDG-ALVGIVSQRNLSNRVVAEAMDVSAPIRDVMTPDPYTLRQDELVLSAVNLMM 241

Query: 311 QHNISVLMVVDDCQKAIGIV 330
           +HN+  + ++D  +  +G+V
Sbjct: 242 KHNVQHVPIIDADKHVLGLV 261


>gi|254291611|ref|ZP_04962400.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422468|gb|EDN14426.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALNTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|153216095|ref|ZP_01950269.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229521096|ref|ZP_04410517.1| transcriptional regulator RpiR family [Vibrio cholerae TM 11079-80]
 gi|229527293|ref|ZP_04416686.1| transcriptional regulator RpiR family [Vibrio cholerae 12129(1)]
 gi|124114471|gb|EAY33291.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229335301|gb|EEO00785.1| transcriptional regulator RpiR family [Vibrio cholerae 12129(1)]
 gi|229341981|gb|EEO06982.1| transcriptional regulator RpiR family [Vibrio cholerae TM 11079-80]
 gi|327483085|gb|AEA77492.1| Sialic acid utilization regulator, RpiR family [Vibrio cholerae
           LMA3894-4]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|109947724|ref|YP_664952.1| inosine 5'-monophosphate dehydrogenase [Helicobacter acinonychis
           str. Sheeba]
 gi|109714945|emb|CAJ99953.1| inosine-5-monophosphate dehydrogenase [Helicobacter acinonychis
           str. Sheeba]
          Length = 481

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKAITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++ L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQK 201


>gi|15789345|ref|NP_279169.1| glucosamine--fructose-6-phosphate aminotransferase [Halobacterium
           sp. NRC-1]
 gi|169235054|ref|YP_001688254.1| glucosamine--fructose-6-phosphate aminotransferase [Halobacterium
           salinarum R1]
 gi|21759139|sp|Q9HT00|GLMS_HALSA RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|10579654|gb|AAG18649.1| glutamine-fructose-6-phosphate transaminase [Halobacterium sp.
           NRC-1]
 gi|167726120|emb|CAP12886.1| glutamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Halobacterium salinarum R1]
          Length = 601

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           ++ +S   S L  +++     + E ++ +   + I   G S H G      L +      
Sbjct: 260 RQAISGRISDLGTDVTLDMELSTETLQNV-AELQIVACGTSYHAGLYAKELLETHADLPV 318

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            VH A       G    D L++ ++ SG + +  A L  A +   P +A+T+   S V  
Sbjct: 319 TVHVASEYELRGGRSPEDTLVVAITQSGETADTLAALRSAAQKGAPTLALTNTLGSTVTR 378

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            AD  L +   PE    G+A T + + Q+A    L + +  +RN
Sbjct: 379 EADDALFIRAGPEI---GVAATKTFVSQVATAALLTMHIGRARN 419


>gi|310817677|ref|YP_003950035.1| CBS domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390749|gb|ADO68208.1| CBS domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 387

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 5/121 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF 276
           + A ++M  G  +  ++    L +   ++ ++  G V +VD    L GI+T+ D + R F
Sbjct: 241 LTAREIMTRG--VKTLRRDSSLREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLVIRAF 298

Query: 277 --HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             HK    L   DVM  + + +  D  L   + ++ +  I  + VVD     IGI+   D
Sbjct: 299 TGHKSPEQLRAGDVMTDDVECVHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGD 358

Query: 335 L 335
           +
Sbjct: 359 I 359


>gi|310640757|ref|YP_003945515.1| abc-type proline/glycine betaine transport system atpase
           component-like protein [Paenibacillus polymyxa SC2]
 gi|309245707|gb|ADO55274.1| ABC-type proline/glycine betaine transport system ATPase
           component-like protein [Paenibacillus polymyxa SC2]
          Length = 449

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ ++ E+    + V+D  +KL G+I   D     H   N L +ED++I +   +  +T+
Sbjct: 336 ALELMRERGISNLFVIDRTKKLLGVINAEDA---VHALRNNLKIEDILITDGPQVTAETV 392

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +    ++     +  L VVDD QK +G++
Sbjct: 393 INDLFEITSSSKVP-LAVVDDKQKLLGVI 420


>gi|307546228|ref|YP_003898707.1| DNA-binding transcriptional regulator HexR [Halomonas elongata DSM
           2581]
 gi|307218252|emb|CBV43522.1| DNA-binding transcriptional regulator HexR [Halomonas elongata DSM
           2581]
          Length = 285

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 3/85 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+++VLS++G + EL  I   AR     ++ IT  N  +     +I+      PE   H 
Sbjct: 180 DVVVVLSYTGRTRELVDIAAQARANGAIVLGITDPNSPLADQCTEILAV--SAPEDTEHY 237

Query: 173 LAPTTSAIMQLAIGDALAIALLESR 197
           + P TS ++QLA+ D LA  +   R
Sbjct: 238 M-PMTSRMIQLALIDVLATGVTLRR 261


>gi|15803571|ref|NP_289604.1| hypothetical protein Z4381 [Escherichia coli O157:H7 EDL933]
 gi|15833166|ref|NP_311939.1| transcriptional regulator [Escherichia coli O157:H7 str. Sakai]
 gi|168747465|ref|ZP_02772487.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4113]
 gi|168753995|ref|ZP_02779002.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4401]
 gi|168760186|ref|ZP_02785193.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4501]
 gi|168767048|ref|ZP_02792055.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4486]
 gi|168773318|ref|ZP_02798325.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4196]
 gi|168781901|ref|ZP_02806908.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4076]
 gi|168785899|ref|ZP_02810906.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC869]
 gi|168797617|ref|ZP_02822624.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC508]
 gi|195937171|ref|ZP_03082553.1| putative transcriptional regulator [Escherichia coli O157:H7 str.
           EC4024]
 gi|208808340|ref|ZP_03250677.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4206]
 gi|208813659|ref|ZP_03254988.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4045]
 gi|208819736|ref|ZP_03260056.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4042]
 gi|209399432|ref|YP_002272503.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4115]
 gi|217327617|ref|ZP_03443700.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. TW14588]
 gi|254794981|ref|YP_003079818.1| hypothetical protein ECSP_4003 [Escherichia coli O157:H7 str.
           TW14359]
 gi|261228041|ref|ZP_05942322.1| hypothetical protein EscherichiacoliO157_26046 [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261254897|ref|ZP_05947430.1| hypothetical protein EscherichiacoliO157EcO_03621 [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291284407|ref|YP_003501225.1| Iron transport system regulatory protein FitR [Escherichia coli
           O55:H7 str. CB9615]
 gi|12517599|gb|AAG58163.1|AE005532_7 orf; hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13363385|dbj|BAB37335.1| putative transcriptional regulator [Escherichia coli O157:H7 str.
           Sakai]
 gi|187770948|gb|EDU34792.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4196]
 gi|188017792|gb|EDU55914.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4113]
 gi|189000593|gb|EDU69579.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4076]
 gi|189358554|gb|EDU76973.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4401]
 gi|189363689|gb|EDU82108.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4486]
 gi|189369421|gb|EDU87837.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4501]
 gi|189374205|gb|EDU92621.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC869]
 gi|189379865|gb|EDU98281.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC508]
 gi|208728141|gb|EDZ77742.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4206]
 gi|208734936|gb|EDZ83623.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4045]
 gi|208739859|gb|EDZ87541.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4042]
 gi|209160832|gb|ACI38265.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. EC4115]
 gi|217319984|gb|EEC28409.1| iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. TW14588]
 gi|254594381|gb|ACT73742.1| hypothetical protein ECSP_4003 [Escherichia coli O157:H7 str.
           TW14359]
 gi|290764280|gb|ADD58241.1| Iron transport system regulatory protein FitR [Escherichia coli
           O55:H7 str. CB9615]
 gi|320189380|gb|EFW64039.1| hypothetical protein ECoD_04386 [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640103|gb|EFX09675.1| Iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. G5101]
 gi|320645400|gb|EFX14409.1| Iron transport system regulatory protein FitR [Escherichia coli
           O157:H- str. 493-89]
 gi|320650712|gb|EFX19169.1| Iron transport system regulatory protein FitR [Escherichia coli
           O157:H- str. H 2687]
 gi|320656407|gb|EFX24314.1| Iron transport system regulatory protein FitR [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320661779|gb|EFX29187.1| Iron transport system regulatory protein FitR [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320666931|gb|EFX33907.1| Iron transport system regulatory protein FitR [Escherichia coli
           O157:H7 str. LSU-61]
 gi|326337733|gb|EGD61567.1| hypothetical protein ECF_05358 [Escherichia coli O157:H7 str. 1125]
 gi|326347297|gb|EGD71022.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. 1044]
          Length = 295

 Score = 37.4 bits (85), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|308190014|ref|YP_003922945.1| transcriptional regulator [Mycoplasma fermentans JER]
 gi|307624756|gb|ADN69061.1| putative transcriptional regulator [Mycoplasma fermentans JER]
          Length = 266

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI-IVLSWSGSS 124
           +++I GIG SG IGS LA  L   G  S  +++            +DD+  I++S S  +
Sbjct: 131 KLIIFGIGTSGIIGSYLAKQLTRIGIISVCMNSIHDFKDAYNESNKDDVFYIIISKSFKN 190

Query: 125 DELK--AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            E+K  A +     F+  ++   +EN S   C + I+       ++  + +    S  M 
Sbjct: 191 HEVKEAAEILDKSNFNFQILT-RNENVSYANCTSPIIYDYIPAQKNFNYDIVSKLSLFML 249

Query: 183 LAIGDALAIALLESRN 198
           + I    A  L++++N
Sbjct: 250 IDIIYIYAKTLIDNKN 265


>gi|284047406|ref|YP_003397745.1| CBS domain containing membrane protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283951627|gb|ADB46430.1| CBS domain containing membrane protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 222

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 19/105 (18%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------VEDVMIKNPKVILEDTL 301
           + VVD    LKGI+T+GD+ R    D +TL              +D+M K    +  +  
Sbjct: 35  IPVVDGDGHLKGIVTDGDVSRATPSDASTLDRYEANYILGKLKAKDLMTKAVITVKAEDG 94

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVH-------FLDLLRFG 339
           +  A  L+ +  I  L VVD   K +GI+        F+DLL + 
Sbjct: 95  VETAAYLMYKFKIGALPVVDATNKVVGIISDTDVFKAFVDLLGYA 139


>gi|218555086|ref|YP_002387999.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI1]
 gi|218361854|emb|CAQ99454.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli IAI1]
          Length = 282

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  S 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNSA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|205372110|ref|ZP_03224926.1| D-fructose-6-phosphate amidotransferase [Bacillus coahuilensis
           m4-4]
          Length = 600

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 54/123 (43%), Gaps = 9/123 (7%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S H   +G +   T+A        VH A     ++ +++   L I +S SG
Sbjct: 292 RIYIVACGTSYHAGLVGKQFIETMAKKPVE---VHVASEFSYNMPLLSEKPLFIFISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L   +      I IT+   S ++  AD  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVQVKEMGHKAITITNVPGSTLSREADYTLLLHAGPEIA---VASTKAYTAQ 405

Query: 183 LAI 185
           LA+
Sbjct: 406 LAV 408


>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
 gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
          Length = 153

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V+DVM  NP  +   T L  A++L+ + +IS L VV+D    +G++   DL+
Sbjct: 2   TKTVKDVMTPNPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLM 56


>gi|13620228|emb|CAC36403.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 1/87 (1%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A+  + + R  CV VVD    L+GI+T GD+ R+  K+    S +D+ + +    L  +
Sbjct: 595 EALECMHDGRQSCVLVVDAEGYLEGILTYGDVKRSLFKNHGDSSNKDLSVTDANTCLVSS 654

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + T  +   R  +  +L    D   AI
Sbjct: 655 ICTKGIS-YRGQDCGLLTCYPDTDLAI 680


>gi|50292205|ref|XP_448535.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49527847|emb|CAG61496.1| unnamed protein product [Candida glabrata]
          Length = 320

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 24/171 (14%)

Query: 191 IALLESRNFSENDFYV--LHPGGKLGTLFVCASDV--MH---------SGDSIPLVKIGC 237
           IALL+  +F+E +  V  L     L  L +   DV  MH         +  +I   K+  
Sbjct: 147 IALLDKEDFTERELVVGMLTQYRILKFLVLNYKDVHFMHRSINSLQLGTRKNIKSCKMET 206

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNP 293
           PLID I +++      V ++DE   L       DI        + DL+    E +M +  
Sbjct: 207 PLIDTIQLMTTHEVSSVPILDENGVLLNAYEASDILGLVKGGIYNDLSLCVGEALMRRGD 266

Query: 294 KV------ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     ED L T+   ++R+  +    +VD+  + IGI+   DLLR+
Sbjct: 267 DYEGIYTCTGEDKLATI-FDIIRKSRVHTFYLVDENGRLIGILTLGDLLRY 316


>gi|319651589|ref|ZP_08005716.1| YqzB protein [Bacillus sp. 2_A_57_CT2]
 gi|317396656|gb|EFV77367.1| YqzB protein [Bacillus sp. 2_A_57_CT2]
          Length = 211

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 7/107 (6%)

Query: 229 SIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
           SIP+V      + DAI  +  +  G + VVD+   L G+++  D+ R     ++LN++ V
Sbjct: 86  SIPVVVNENVSVYDAIVTMFLEDVGTLFVVDQSSLLVGVLSRKDLLRASIGKQELNSIPV 145

Query: 286 EDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             +M + P + +   +D L+ VA +L+ +  I  L VV   +K   +
Sbjct: 146 NIIMTRMPNITMCEKDDLLIEVAKKLIEKQ-IDALPVVKKTEKGFEV 191


>gi|261867630|ref|YP_003255552.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412962|gb|ACX82333.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 488

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLL 302
           I  +  F    VVD    L GIIT  DI   F  ++N  +V D M    +++   ED   
Sbjct: 113 IAQKNGFAGYPVVDADNNLVGIITGRDI--RFVSNVNK-TVADFMTPKDRLVTVKEDAQR 169

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               QL+ +H +  ++VVDD  K  G++   D  +
Sbjct: 170 EEIFQLMHKHRVEKVLVVDDNFKLKGMITLKDYQK 204


>gi|206971710|ref|ZP_03232660.1| transcriptional regulator, RpiR family [Bacillus cereus AH1134]
 gi|206733695|gb|EDZ50867.1| transcriptional regulator, RpiR family [Bacillus cereus AH1134]
          Length = 284

 Score = 37.4 bits (85), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++ + ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L T  +E
Sbjct: 176 GLLSENSVVIGISHSGSNKGLLEALEVAKVRGAKIIAITSYKKSALSQLADITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|294790667|ref|ZP_06755825.1| inosine-5'-monophosphate dehydrogenase [Scardovia inopinata F0304]
 gi|294458564|gb|EFG26917.1| inosine-5'-monophosphate dehydrogenase [Scardovia inopinata F0304]
          Length = 514

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 9/87 (10%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLR 310
           V+D   +L GIIT  D+      D + L V DVM K+     P  I +D     A +LL 
Sbjct: 138 VIDSDNRLVGIITNRDMRFIDSADYDRLHVRDVMTKDNLITGPANISKDD----AHRLLA 193

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ +  L +VDD  K  G++   D ++
Sbjct: 194 ENKVEKLPLVDDEGKLTGLITVKDFVK 220


>gi|148269730|ref|YP_001244190.1| RpiR family transcriptional regulator [Thermotoga petrophila RKU-1]
 gi|170288405|ref|YP_001738643.1| RpiR family transcriptional regulator [Thermotoga sp. RQ2]
 gi|147735274|gb|ABQ46614.1| transcriptional regulator, RpiR family [Thermotoga petrophila
           RKU-1]
 gi|170175908|gb|ACB08960.1| transcriptional regulator, RpiR family [Thermotoga sp. RQ2]
          Length = 280

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 5/94 (5%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPK 164
           L   + +DL++ +S +G +  +      A+   +P++AIT   KS +A ++++VL T  K
Sbjct: 172 LATASPNDLLVAISHTGETISVVNFAKKAKEMKMPVVAITGNRKSTLAKYSNVVLATNTK 231

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           E +     +   TS I+QL I D +   LL +R+
Sbjct: 232 ETKIRTDAM---TSRIVQLVILDTI-YTLLAARD 261


>gi|83815901|ref|YP_444692.1| CBS-domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83757295|gb|ABC45408.1| CBS-domain-containing protein [Salinibacter ruber DSM 13855]
          Length = 207

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VE 286
           LID    L E  F  + VV++G  L G+I++ D+ +            H+D+ TLS    
Sbjct: 92  LIDIRKRLQEGGFNHMLVVEDG-ALCGVISDRDVLKAISPFLDTYSEKHRDVKTLSRPAS 150

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M  +P  +   T +  A Q L  + +S L VV +    IGIV   D+L +
Sbjct: 151 EIMQGDPITVAPGTPVEEASQTLLDNRVSSLPVV-EGGDLIGIVTGKDMLEY 201


>gi|68248830|ref|YP_247942.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae
           86-028NP]
 gi|68057029|gb|AAX87282.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           86-028NP]
          Length = 488

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM K   ++  
Sbjct: 107 LAELAEMVKKNGFAGYPVVDEENNLIGIITGRDT--RFVKDLSK-TVSQVMTKKEDLVTV 163

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E       ++L+ QH +  ++VV+D  K  G++   D  +
Sbjct: 164 KEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQK 204


>gi|58579454|ref|YP_197666.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418080|emb|CAI27284.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 485

 Score = 37.0 bits (84), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           A++I+ +  +  + VV E   G++L GI+T  D+    +KD     V D+M K+  + + 
Sbjct: 105 ALSIMKKSSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVADIMTKDHLITVP 161

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +    A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 162 EGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|295703980|ref|YP_003597055.1| CBS domain-containing protein [Bacillus megaterium DSM 319]
 gi|294801639|gb|ADF38705.1| CBS domain protein [Bacillus megaterium DSM 319]
          Length = 140

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+  A  ++ +   G V V  E  ++ G+IT+ DI  N     KD NT+   D M K+  
Sbjct: 20  PITAAAKLMRDINCGSVPVCQEN-RVMGMITDRDIVLNCVADGKDCNTVHCHDCMTKDVI 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               DT +    +++  H I  ++VV++    +GI    DL    +
Sbjct: 79  TCSPDTDIHECARMMADHQIRRIIVVEN-NNMVGICAIGDLATVNV 123


>gi|293412403|ref|ZP_06655126.1| transcriptional regulator [Escherichia coli B354]
 gi|291469174|gb|EFF11665.1| transcriptional regulator [Escherichia coli B354]
          Length = 295

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A      G P+  ++       + L  + R D++I+++   + 
Sbjct: 143 QVAIFGIGASGILADYTARLFNRIGLPATALNRTGIGLAEQLIALQRGDVLIMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E    L  ARR  IP+I +T+   S  +  A IV+ +P+  E
Sbjct: 203 REGLTTLREARRLGIPVILLTNALDSRFSKDASIVIHVPRGDE 245


>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
 gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
          Length = 145

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 15/106 (14%)

Query: 241 DAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFRNFHKDLNT---LSVEDVMIK----- 291
           DA  I+SEKR G V + D+G     GI++E DI R   K   +   L V D+M K     
Sbjct: 26  DAARIMSEKRIGAVVISDDGGATPAGILSERDIVRELGKQGPSCMALVVSDMMTKKLVTC 85

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +P    +  L+ +     R       M V D  K +G++   D ++
Sbjct: 86  SPSDTTDSVLVKMTQGRFRH------MPVMDGGKMVGLISIGDAVK 125


>gi|254392009|ref|ZP_05007200.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294814531|ref|ZP_06773174.1| Inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442921|ref|ZP_08217655.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197705687|gb|EDY51499.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327130|gb|EFG08773.1| Inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 500

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   +L GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 113 LGEADELCAKFRISGVPVTDRSGRLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 169

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V AM+LLR+H I  L +VD+     G++   D ++
Sbjct: 170 VGISGVDAMELLRRHKIEKLPLVDEAGVLKGLITVKDFVK 209


>gi|145632464|ref|ZP_01788198.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           3655]
 gi|144986659|gb|EDJ93211.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           3655]
          Length = 488

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM K   ++  
Sbjct: 107 LAELAEMVKKNGFAGYPVVDEENNLIGIITGRDT--RFVKDLSK-TVSQVMTKKEDLVTV 163

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E       ++L+ QH +  ++VV+D  K  G++   D  +
Sbjct: 164 KEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQK 204


>gi|94496911|ref|ZP_01303485.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. SKA58]
 gi|94423587|gb|EAT08614.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. SKA58]
          Length = 485

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 18/105 (17%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  ++   +   + VV+E  KL GI+T  D+   F ++   L V ++M K       
Sbjct: 104 LSDAQMLMQRHKISGIPVVEESGKLVGILTHRDV--RFAENPAQL-VSELMTK------- 153

Query: 299 DTLLTV--------AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D L TV        A +LL Q  I  L+VVD+    +G++   D+
Sbjct: 154 DNLATVKAGVSQDEAQRLLHQRRIEKLLVVDEAYHCVGLITVKDI 198


>gi|82752044|ref|YP_417785.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
 gi|82657575|emb|CAI82019.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           RF122]
          Length = 408

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD  + L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDRDKHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 355


>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
 gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
          Length = 259

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRN---FHKDLNTLSV 285
           I  VK    + DAI +++    GC+ VV E    L GI TE D         K      V
Sbjct: 122 IIYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDGSLVGIFTERDYLGKVALMGKSSKETLV 181

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
           +D M      I     +  AM+L+ +     + VVD DC   IG+V   DL++
Sbjct: 182 QDAMTTKVVTINSKVGVVEAMKLMTEKRFRHIPVVDEDCINVIGLVSITDLIK 234


>gi|238796835|ref|ZP_04640340.1| Transcriptional regulator, RpiR family [Yersinia mollaretii ATCC
           43969]
 gi|238719323|gb|EEQ11134.1| Transcriptional regulator, RpiR family [Yersinia mollaretii ATCC
           43969]
          Length = 243

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 8/104 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R++  GIG SG +G   A   ++ G   F  +  +  +     + +D + I+LS SG ++
Sbjct: 113 RIIFVGIGTSGALGKYSARFFSNIG--KFSTYIDDPYYPINSDMYQDAIAIILSVSGETE 170

Query: 126 ELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           E   I+  A +FS+    +I++T+   S +A  AD+ ++    P
Sbjct: 171 E---IIRLANQFSLHKCKIISLTNSENSTLAKMADLNISYHMPP 211


>gi|218282087|ref|ZP_03488386.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
 gi|218216880|gb|EEC90418.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
          Length = 216

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 54/107 (50%), Gaps = 13/107 (12%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED------------VMI 290
           I ++ EK    V VV++GQ L G+ITEG I  +   +  +LS+ +            VM+
Sbjct: 25  IDLMKEKEIHRVPVVEKGQ-LVGLITEGMISNSGTTNATSLSIYELNYLLSKTTVSTVMV 83

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K    + E+ L+  A Q + ++NI  L V++   +  GIV   D+ +
Sbjct: 84  KKVISVDENELMEYATQKMLKNNIGCLPVINASGEVTGIVTQNDVFK 130


>gi|15925438|ref|NP_372972.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|15928027|ref|NP_375560.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus N315]
 gi|156980763|ref|YP_001443022.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|255007223|ref|ZP_05145824.2| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50-omega]
 gi|257794788|ref|ZP_05643767.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9781]
 gi|258407468|ref|ZP_05680611.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9763]
 gi|258422204|ref|ZP_05685116.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9719]
 gi|258439596|ref|ZP_05690342.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9299]
 gi|258442847|ref|ZP_05691407.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A8115]
 gi|258446452|ref|ZP_05694607.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A6300]
 gi|258450431|ref|ZP_05698523.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A6224]
 gi|258455192|ref|ZP_05703152.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A5937]
 gi|282893899|ref|ZP_06302131.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A8117]
 gi|282928485|ref|ZP_06336086.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A10102]
 gi|295405143|ref|ZP_06814956.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A8819]
 gi|297244198|ref|ZP_06928088.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A8796]
 gi|13702398|dbj|BAB43539.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus N315]
 gi|14248222|dbj|BAB58610.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|156722898|dbj|BAF79315.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus Mu3]
 gi|257788760|gb|EEV27100.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9781]
 gi|257840980|gb|EEV65431.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9763]
 gi|257841635|gb|EEV66072.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9719]
 gi|257847372|gb|EEV71374.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A9299]
 gi|257851968|gb|EEV75902.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A8115]
 gi|257854520|gb|EEV77468.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A6300]
 gi|257856523|gb|EEV79432.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A6224]
 gi|257862403|gb|EEV85171.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus A5937]
 gi|282589880|gb|EFB94964.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A10102]
 gi|282763957|gb|EFC04085.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A8117]
 gi|285818109|gb|ADC38596.1| Osmotically activated L-carnitine/choline ABC transporter,
           ATP-binding protein OpuCA [Staphylococcus aureus
           04-02981]
 gi|294970088|gb|EFG46106.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A8819]
 gi|297178976|gb|EFH38221.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus A8796]
          Length = 410

 Score = 37.0 bits (84), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 263 IQADATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 357


>gi|293392142|ref|ZP_06636476.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952676|gb|EFE02795.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLL 302
           I  +  F    VVD    L GIIT  DI   F  ++N  +V D M    +++   ED   
Sbjct: 113 IAQKNGFAGYPVVDADNNLVGIITGRDI--RFVSNVNK-TVADFMTPKDRLVTVKEDAQR 169

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               QL+ +H +  ++VVDD  K  G++   D  +
Sbjct: 170 EEIFQLMHKHRVEKVLVVDDNFKLKGMITLKDYQK 204


>gi|261250346|ref|ZP_05942922.1| transcriptional regulator RpiR family [Vibrio orientalis CIP
           102891]
 gi|260939462|gb|EEX95448.1| transcriptional regulator RpiR family [Vibrio orientalis CIP
           102891]
          Length = 282

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 42/197 (21%), Positives = 84/197 (42%), Gaps = 7/197 (3%)

Query: 8   FKSVTRKG--HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
           ++  +RK    S+ ++   Q  +  +++ K+   SLE ++          A E +     
Sbjct: 77  YQPTSRKTIHGSISRSDDTQVVMEKLLSSKQ--RSLERTVALNDDVNIQSATELLHNA-S 133

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ I+G+G S  +   L+  L   G      H A     +   +  +D+++ LS+SG S 
Sbjct: 134 KIQISGVGASSLVAKDLSYKLMKIGHAVHCEHDAHIQVANASALNENDVLVALSYSGRSR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+  +   A+     +I I+    + +  +ADI L    + E      +  T+   QL +
Sbjct: 194 EILRVAQIAKGRKAKVITISQLAPTPLDKYADIKLMTAADEEQIRS--SSITARDSQLLM 251

Query: 186 GDALAIALLESRNFSEN 202
            D L IAL +    ++ 
Sbjct: 252 TDLLFIALTQQEESADQ 268


>gi|148268885|ref|YP_001247828.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|150394959|ref|YP_001317634.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|253314784|ref|ZP_04837997.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus str. CF-Marseille]
 gi|269204081|ref|YP_003283350.1| amino acid ABC transporter, ATP-binding protein [Staphylococcus
           aureus subsp. aureus ED98]
 gi|296275608|ref|ZP_06858115.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus MR1]
 gi|147741954|gb|ABQ50252.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Staphylococcus aureus subsp. aureus JH9]
 gi|149947411|gb|ABR53347.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Staphylococcus aureus subsp. aureus JH1]
 gi|262076371|gb|ACY12344.1| amino acid ABC transporter, ATP-binding protein [Staphylococcus
           aureus subsp. aureus ED98]
 gi|312830793|emb|CBX35635.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130915|gb|EFT86900.1| glycine betaine/carnitine/choline ABC transporter [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|329723442|gb|EGG59971.1| choline ABC transporter, ATP-binding protein OpuBA [Staphylococcus
           aureus subsp. aureus 21172]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQADATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 355


>gi|307719578|ref|YP_003875110.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
 gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
 gi|315186619|gb|EFU20378.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
           6578]
          Length = 214

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V  VM  NP  +   T L+ A +L+R+  I  L V+D+  + +GIV   DLL
Sbjct: 1   MKVAQVMTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLL 54


>gi|228985358|ref|ZP_04145517.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774311|gb|EEM22718.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 202

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS+  L   L   R     +I ITS  KS ++  ADI L T  +E
Sbjct: 94  GLLSKNSVVIGISHSGSNKGLLEALEIVRARGAKIIVITSYQKSALSQLADITLYTSTRE 153

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 154 TEFRTE---ASSSRLAQLSLLDTLYVGL 178


>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
 gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 162

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT--LSVEDVM 289
           V+  C + +A+ +++E   G V VVD  ++L GI TE D  R    K L +  +SV ++M
Sbjct: 33  VRPDCSVFEALGVMAEFDIGSVIVVD-NERLVGIFTERDYARKVVLKGLGSRDVSVSELM 91

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             NP  +     +   M ++ ++    L VVD   + +G+V   D+++
Sbjct: 92  TPNPCTVTPTHTVDEVMAIMTENRFRHLPVVDHG-RIVGMVTIGDMVK 138


>gi|115252811|emb|CAK98247.1| inosine-5'-monophosphate dehydrogenase transmembrane protein
           [Spiroplasma citri]
          Length = 481

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/96 (35%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM-IKNPKVILED 299
           DA  I+++ R   + +VDE  KL GIIT  DI R  H DL T SV+  M +KN     E+
Sbjct: 106 DAENIMAQYRISGLPIVDEENKLLGIITNRDI-RACH-DL-TASVDKFMTVKNLITTHEN 162

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             L  A  +L  + I  L +V++     G++   D+
Sbjct: 163 IDLEKAKDILLNNRIEKLPIVNEKNILTGLITIKDI 198


>gi|116753914|ref|YP_843032.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665365|gb|ABK14392.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 283

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 51/95 (53%), Gaps = 6/95 (6%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           + +L+E+    V VV +   + G++T  D+ RN  +D     +  +M +NP V+  +  L
Sbjct: 26  LKVLNERHVSGVPVV-KNCTVVGMVTRTDLLRNPEED----QIAMLMTRNPYVVHPEDRL 80

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A +L  +  +  L VV+D ++ +GI+   DL++
Sbjct: 81  VDAAKLFVEKRVRRLPVVED-ERLVGIISVADLVK 114


>gi|320139155|gb|EFW31037.1| glycine betaine/L-proline transport ATP binding subunit
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142591|gb|EFW34399.1| glycine betaine/L-proline transport ATP binding subunit
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 423

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 276 IQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 330

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 331 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 370


>gi|294506450|ref|YP_003570508.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
 gi|294342778|emb|CBH23556.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
          Length = 207

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 14/112 (12%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VE 286
           LID    L E  F  + VV++G  L G+I++ D+ +            H+D+ TLS    
Sbjct: 92  LIDIRKRLQEGGFNHMLVVEDG-ALCGVISDRDVLKAISPFLDTYSEKHRDVKTLSRPAS 150

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M  +P  +   T +  A Q L  + +S L VV +    IGIV   D+L +
Sbjct: 151 EIMQGDPITVAPGTPVEEASQTLLDNRVSSLPVV-EGGDLIGIVTGKDMLEY 201


>gi|116334165|ref|YP_795692.1| transcriptional regulator [Lactobacillus brevis ATCC 367]
 gi|116099512|gb|ABJ64661.1| Transcriptional regulator [Lactobacillus brevis ATCC 367]
          Length = 286

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 9/109 (8%)

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L + L+ T  P F +   +A+      ++  D  +V+S SG + E   ++   +R  + +
Sbjct: 156 LRTALSVTYYPDFDIQLMQAAR-----LSDQDCAVVISHSGRNSETLQVVEELQRNDVSI 210

Query: 142 IAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           IAITS + S +A  AD+  L+L  E      G+    S I QLAI D L
Sbjct: 211 IAITSYSGSPLAQAADVTFLSLTDEVNYRSEGMY---SLISQLAILDTL 256


>gi|83589956|ref|YP_429965.1| inosine-5'-monophosphate dehydrogenase [Moorella thermoacetica ATCC
           39073]
 gi|83572870|gb|ABC19422.1| inosine-5'-monophosphate dehydrogenase [Moorella thermoacetica ATCC
           39073]
          Length = 485

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVILE- 298
           +AI ++       V + D G KL GIIT  DI F + H+      +++VM K+  V    
Sbjct: 110 EAIALMEHYHISGVPITDNG-KLVGIITNRDIRFEDNHE----RPIKEVMTKDNLVTAPV 164

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  AM +LR H I  L +VD      G++   D+
Sbjct: 165 GTTLAEAMAILRAHKIEKLPLVDADYNLKGLITIKDI 201


>gi|114567608|ref|YP_754762.1| glutamine--fructose-6-phosphate transaminase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
 gi|114338543|gb|ABI69391.1| Glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 367

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 53/106 (50%), Gaps = 6/106 (5%)

Query: 65  GRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           G+++I   G S H   +G  +   LA    P     A+E  + ++ +   +DL+IV+S S
Sbjct: 52  GKIIIAACGTSYHAGMVGRLVIEKLARI--PVEIDLASEFRYREV-LWNPNDLVIVISQS 108

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           G + +  A L  AR   I ++AIT+   S +A  A+ V+     PE
Sbjct: 109 GETSDTLAALREARHNGIKVLAITNVPGSTIAQEAERVIYTHAGPE 154


>gi|186680884|ref|YP_001864080.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
 gi|186463336|gb|ACC79137.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
          Length = 1233

 Score = 37.0 bits (84), Expect = 4.0,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 18/116 (15%)

Query: 231 PLVKI-GCPLIDAITIL---------SEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHK 278
           PL+ +   P+ID I ++         S+  F    +V E   L GI+T  D+ R     K
Sbjct: 20  PLIVLPDTPVIDVIALMNRVNSSIVESKFDFSSYVLVVEETNLIGILTLRDVIRLTGMGK 79

Query: 279 DLNTLSVEDVMIKNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DL+++ + +VM + P + L        LT A+  +RQH I  L VVDD  + +G++
Sbjct: 80  DLSSVKISEVMTQ-PVISLGLAQAQNALT-ALSFMRQHCIRHLPVVDDLGQLVGLI 133


>gi|315644413|ref|ZP_07897546.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
 gi|315280163|gb|EFU43456.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
          Length = 485

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 2/95 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++ + R   V +VDE  KL GI+T  D+   F  D +T+  E +  +N       T
Sbjct: 110 DAEKLMGKFRISGVPIVDESNKLIGILTNRDL--RFVHDYSTVISEVMTSENLVTAPVGT 167

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A  +L++H I  L +VD+     G++   D+
Sbjct: 168 TLQDAEMILQKHKIEKLPLVDEDNVLKGLITIKDI 202


>gi|288556583|ref|YP_003428518.1| cell wall regulatory transcriptional regulator [Bacillus
           pseudofirmus OF4]
 gi|288547743|gb|ADC51626.1| cell wall regulatory transcriptional regulator [Bacillus
           pseudofirmus OF4]
          Length = 284

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 5/72 (6%)

Query: 97  HAAEAS--HGDLGMIT---RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           HAA +S  H  +  IT   + D+I+  S SG + E+  I  YA+   I +I+IT+ N+S 
Sbjct: 161 HAAASSDYHYMVPFITYMKKGDVILCFSSSGKTKEVIDIAQYAKERGITVISITTLNQSP 220

Query: 152 VACHADIVLTLP 163
           +   +DI L +P
Sbjct: 221 LYKMSDITLCIP 232


>gi|262048850|ref|ZP_06021731.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus D30]
 gi|259163108|gb|EEW47669.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus D30]
          Length = 410

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 263 IQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 357


>gi|239990116|ref|ZP_04710780.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           roseosporus NRRL 11379]
          Length = 484

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 98  LGEADALCAKFRISGVPVTDAAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 154

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  V AM+LLR+H I  L +VD+     G++   D 
Sbjct: 155 VGISGVEAMELLRRHKIEKLPLVDEAGLLKGLITVKDF 192


>gi|229083626|ref|ZP_04215952.1| N-acetylmuramic acid 6-phosphate etherase [Bacillus cereus
           Rock3-44]
 gi|228699690|gb|EEL52349.1| N-acetylmuramic acid 6-phosphate etherase [Bacillus cereus
           Rock3-44]
          Length = 297

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)

Query: 45  LQGELSFQFHCAVEKI-KAIK--GRVVITGIGKSGHIG---------------SKLASTL 86
           +Q EL  Q   AVE I  A+K  GR++  G G SG IG               SK+   +
Sbjct: 43  VQKELP-QIAKAVEMIVAAMKSGGRLIYMGAGTSGRIGLLDAVECPPTFNTDPSKVVGLI 101

Query: 87  ASTGTPSFFVHAAEASHGDLGM---------ITRDDLIIVLSWSGSSDELKAILYYARRF 137
           A  G  S F+ A E +   L +         +T  D+++ ++ SG +  + A L YA + 
Sbjct: 102 A--GGESAFIKAVEGAEDSLTLGRQDLEKIQLTSSDVVVGIAASGRTPYVIAGLNYANQL 159

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPE 167
               +AI+   +S +   A I + +   PE
Sbjct: 160 GAGTVAISCNKESEIGKIAAIAIEVVNGPE 189


>gi|293375422|ref|ZP_06621703.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Turicibacter sanguinis PC909]
 gi|292645975|gb|EFF64004.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Turicibacter sanguinis PC909]
          Length = 594

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 11/147 (7%)

Query: 58  EKIKAIK--GRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           E +KA+    R+ I   G S H   +G ++   LA  G P+  VH +     +  +I+++
Sbjct: 281 EIVKAVSEADRLYIVAAGTSMHAGFVGKQMFEQLA--GIPTE-VHISSEFVYNTPVISQN 337

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
            L I +S SG + + +A+L   ++     + IT+   S ++  AD  L L   PE     
Sbjct: 338 PLFIFISQSGETADSRAVLVKIKQLGYKSLTITNVPGSTLSREADHTLLLYAGPEIA--- 394

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF 199
           +A T +   Q+A+   LA  + E+ N 
Sbjct: 395 VASTKAYTAQVAVQAILAARVGENHNL 421


>gi|255066546|ref|ZP_05318401.1| transcriptional regulator, RpiR family [Neisseria sicca ATCC 29256]
 gi|255049130|gb|EET44594.1| transcriptional regulator, RpiR family [Neisseria sicca ATCC 29256]
          Length = 116

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 3/87 (3%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            +++  D+++ +S +GSS EL   +  A+     +IA+T  N S +A  AD VL++  + 
Sbjct: 4   SVLSDQDVVVAISNTGSSIELLDAVSIAKENGASVIALT-RNDSPLAQLADCVLSIATQE 62

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +  +   P  S ++QLA+ D LAI L
Sbjct: 63  NAELY--TPMVSRLLQLAVIDILAIGL 87


>gi|157691297|ref|YP_001485759.1| inosine 5'-monophosphate dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157680055|gb|ABV61199.1| IMP dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V+  E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNIEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L ++DD     G++   D+
Sbjct: 165 ASVGTTLEEAEKILQQYKIEKLPLLDDEGTLKGLITIKDI 204


>gi|149907459|ref|ZP_01896206.1| mannose-1-phosphate guanyltransferase [Moritella sp. PE36]
 gi|149809129|gb|EDM69058.1| mannose-1-phosphate guanyltransferase [Moritella sp. PE36]
          Length = 352

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
            +K    + DA+ I++++      VVD+ + L+GI+T+GDI R    +L  T  + +VM 
Sbjct: 9   FIKSTSTVWDALEIINQEALRVALVVDDKECLQGIVTDGDIRRGLLSNLALTADITEVMN 68

Query: 291 KNP 293
            NP
Sbjct: 69  TNP 71


>gi|138893831|ref|YP_001124284.1| glucosamine--fructose-6-phosphate aminotransferase [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265344|gb|ABO65539.1| Glucosamine-fructose-6-phosphate aminotransferase [Geobacillus
           thermodenitrificans NG80-2]
          Length = 600

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 33/122 (27%), Positives = 51/122 (41%), Gaps = 2/122 (1%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
            GEL+       E + A   R+ I   G S H G      + S       VH A     +
Sbjct: 274 NGELAIDQAIVNEVLNA--DRLYIVACGTSYHAGLVGKQLIESWAKIPVEVHIASEFSYN 331

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           + +++   L I +S SG + + +A+L   R+     I IT+   S ++  AD  L L   
Sbjct: 332 MPLLSEKPLFIFISQSGETADSRAVLVQTRKLGHKAITITNVPGSTLSREADYTLLLHAG 391

Query: 166 PE 167
           PE
Sbjct: 392 PE 393


>gi|91201874|emb|CAJ74934.1| similar to Mg2+ transporter MgtE [Candidatus Kuenenia
           stuttgartiensis]
          Length = 332

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           F C A   EG KL GII      R          + D+MI+NP  +  +T L  A++   
Sbjct: 51  FYCYATDSEG-KLTGIIP----LRKLITSPKKAKISDIMIRNPIKLFMETSLDTALEYFL 105

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      VVD+  K IG+    +L+ 
Sbjct: 106 MYKFLAFPVVDEQGKLIGVTRVNNLIE 132


>gi|72163441|ref|YP_291098.1| hypothetical protein Tfu_3042 [Thermobifida fusca YX]
 gi|71917173|gb|AAZ57075.1| CBS [Thermobifida fusca YX]
          Length = 241

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++  V DVM   P  ++  T     ++ L  H +S L VVD+  + +G+V   DLL
Sbjct: 1   MDSTVVRDVMTAEPPSVVASTSFKTIVRTLINHRVSALPVVDEAGRVVGVVSEGDLL 57


>gi|227549905|ref|ZP_03979954.1| IMP dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078001|gb|EEI15964.1| IMP dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 510

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 81/196 (41%), Gaps = 20/196 (10%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP E    P  ++  T     + +G  +A A +++   S     +   GG +G L
Sbjct: 27  DDVLLLPAESHIVPSEVSTATQFTRNIRLGIPIASAAMDTVTESRMAIAMARQGG-IGVL 85

Query: 217 F--VCASDVMHSGDSIPLVKIGCPLIDAITILSEK------------RFGCVAVVDEGQK 262
              + A D     D +   + G  + D +T   E             R   + VVD+   
Sbjct: 86  HRNLSAQDQAEHVDIVKRSESGM-ISDPVTASPEMTLHDVDALCARFRISGLPVVDDSGT 144

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVD 321
           L GIIT  D+   F  D +  SV +VM   P V+  D +    A+ LL  + +  L +VD
Sbjct: 145 LVGIITNRDM--RFEADFDR-SVSEVMTAMPLVVARDGVSKEEALALLSANKVEKLPIVD 201

Query: 322 DCQKAIGIVHFLDLLR 337
           +     G++   D ++
Sbjct: 202 EAGVLTGLITVKDFVK 217


>gi|222444594|ref|ZP_03607109.1| hypothetical protein METSMIALI_00206 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350868|ref|ZP_05976285.1| homoserine O-acetyltransferase [Methanobrevibacter smithii DSM
           2374]
 gi|222434159|gb|EEE41324.1| hypothetical protein METSMIALI_00206 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860205|gb|EFC92503.1| homoserine O-acetyltransferase [Methanobrevibacter smithii DSM
           2374]
          Length = 491

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VV  G+KL GI+T  D+ +    + N L  +++M K  K    D  +    + +R+ +
Sbjct: 404 IPVVTNGKKLIGIVTSWDLSKAIATNSNDL--KEIMTKTVKFCHADDSIESTARRMRKLD 461

Query: 314 ISVLMVVDDCQKAIGIV 330
           IS L VVDD  K  GI+
Sbjct: 462 ISCLPVVDDDFKLKGII 478


>gi|70608066|ref|YP_256936.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           acidocaldarius DSM 639]
 gi|78099265|sp|Q4J6D9|GLMS_SULAC RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|68568714|gb|AAY81643.1| glucosamine-fructose-6-phosphate aminotransferase [Sulfolobus
           acidocaldarius DSM 639]
          Length = 590

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 14/123 (11%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GR+V+ G G S H G   +  L+  G  SF + A+E  +       +DDLI  +S SG +
Sbjct: 294 GRIVVVGAGTSYHAGLYFSLLLSREGMNSFPLIASEYYNFKA---KKDDLIFAISQSGET 350

Query: 125 -DELKAILYYARRFS---IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
            D L+A+    R+F      ++++T+  +S +A  ++  + +   PE     +A T + I
Sbjct: 351 LDLLQAV----RKFKEEGARIVSLTNVIESALARESNYKIYMRAGPEIS---VAATKTFI 403

Query: 181 MQL 183
            QL
Sbjct: 404 TQL 406


>gi|221309365|ref|ZP_03591212.1| hypothetical protein Bsubs1_08271 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313692|ref|ZP_03595497.1| hypothetical protein BsubsN3_08207 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318614|ref|ZP_03599908.1| hypothetical protein BsubsJ_08141 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322888|ref|ZP_03604182.1| hypothetical protein BsubsS_08252 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|2339998|emb|CAB11348.1| YlbB protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 150

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 8/106 (7%)

Query: 237 CPLID----AITILSEKRFGCVAVVDE-GQKLKGIITEGD-IFRNFH-KDLNTLSVEDVM 289
           C ++D    A   + +   G + VVDE G+ L GI+T+ D + R    K  N+  + D M
Sbjct: 15  CTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + P  + ED  +   + L+  H +  + V  + +K  GIV   DL
Sbjct: 75  TEKPVSVEEDASVDEVLHLMASHQLRRIPVTKN-KKLTGIVTLGDL 119


>gi|89098838|ref|ZP_01171719.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus sp. NRRL B-14911]
 gi|89086514|gb|EAR65634.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus sp. NRRL B-14911]
          Length = 186

 Score = 37.0 bits (84), Expect = 4.1,   Method: Compositional matrix adjust.
 Identities = 36/150 (24%), Positives = 62/150 (41%), Gaps = 11/150 (7%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V   G G+SG +    A  L   G  ++ +     + G       +DL+I+ S SG +
Sbjct: 38  GKVFTAGAGRSGFMAKSFAMRLMHMGVDAYVI-GETVTPG----FEENDLLIIGSGSGET 92

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTTSAI 180
             L ++   AR     + A T    S +A  ADI + +P   +    G    + P  S  
Sbjct: 93  KSLVSMAEKARSIGGKIAAATIVPDSSIASLADITVKMPGATKDQNEGGLSTIQPMGSLF 152

Query: 181 MQ--LAIGDALAIALLESRNFSENDFYVLH 208
            Q  L + DA+ + ++E +       +  H
Sbjct: 153 EQSLLLLYDAIILRVMEKKGLDSAKMFGRH 182


>gi|322834569|ref|YP_004214596.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321169770|gb|ADW75469.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 246

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 10/97 (10%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGSS 124
           R++  G+G SG +G   A   ++ G  S F+       + D+    +D + I+LS SG +
Sbjct: 113 RIIFVGVGTSGSLGKYSARFFSNVGKFSTFIDDPYFPINSDM---YKDAIAIILSVSGET 169

Query: 125 DELKAILYYARRFS---IPLIAITSENKSVVACHADI 158
           +E   +L +A +FS     +I++T+   S +A  AD+
Sbjct: 170 EE---VLRFATQFSQHNCKIISLTNSENSTLARLADL 203


>gi|308067986|ref|YP_003869591.1| glycine/betaine ABC transporter ATP-binding protein [Paenibacillus
           polymyxa E681]
 gi|305857265|gb|ADM69053.1| Glycine betaine transport ATP-binding protein opuAA [Paenibacillus
           polymyxa E681]
          Length = 424

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ ++ E+    + V+D  +KL G+I   D     H   N L +ED++I +   +  +T+
Sbjct: 311 ALELMRERGISNLFVIDRTKKLLGVINAEDA---VHALRNNLKIEDILITDGPQVAAETV 367

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +    ++     +  L VVDD QK +G++
Sbjct: 368 INDLFEITSSSKVP-LAVVDDKQKLLGVI 395


>gi|325982180|ref|YP_004294582.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
 gi|325531699|gb|ADZ26420.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
          Length = 149

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 57/104 (54%), Gaps = 6/104 (5%)

Query: 241 DAITILSEKRFGCVAVVDE--GQKLK-GIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           +A  ++ +   G V V+D+  G+ +  G++T+ D+         D   ++V D+M+ +  
Sbjct: 22  EAAKLMRQFHVGAVIVIDKPNGRAVPVGVVTDRDLIVEVMATELDETVITVGDIMVPDIF 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + E+T +  A++L+R+  I  L +VDD  + IGI+   D L++
Sbjct: 82  TVKENTEIHEAIELMRRKTIRRLPIVDDVGELIGILTLDDALQW 125


>gi|309390263|gb|ADO78143.1| inosine-5'-monophosphate dehydrogenase [Halanaerobium praevalens
           DSM 2228]
          Length = 487

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 50/99 (50%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++S+     V +VD+ +KL GI+T  D+    ++ + +  +  E+ ++  P     
Sbjct: 108 DAEALMSKYHISGVPIVDQDEKLLGILTNRDLRFVEDYKRPVAEVMTEEELVTAPV---- 163

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A + LR+H I  L +VD+     G++   D+ +
Sbjct: 164 GTDLEGAKKQLRKHKIEKLPIVDENGILKGLITIKDIEK 202


>gi|302334074|gb|ADL24267.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD  + L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDRDKHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDRQRLVGLI 355


>gi|268317662|ref|YP_003291381.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
 gi|262335196|gb|ACY48993.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
          Length = 644

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 6/102 (5%)

Query: 235 IGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDV 288
           IGC    P+ +A  I+  +R G + V+D  ++  GI+T  D+      +  L  + VE +
Sbjct: 171 IGCAPETPVQEAARIMRAERIGSILVMDAERRPVGILTNSDLRDKVVAEGRLPDMPVEAL 230

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M   P  I  D  +   + L+ +H    L++ +D   A  +V
Sbjct: 231 MSAPPVTIAADAPILEGLVLMARHGFHHLVLTEDGTAASPVV 272


>gi|229196492|ref|ZP_04323236.1| RpiR family transcriptional regulator [Bacillus cereus m1293]
 gi|228586848|gb|EEK44922.1| RpiR family transcriptional regulator [Bacillus cereus m1293]
          Length = 136

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 2/87 (2%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G+++++ ++I +S SGS+  L   L  A+     +IAITS  KS +   ADI  TL    
Sbjct: 28  GLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALIQLADI--TLYTST 85

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIAL 193
                    ++S + QL++ D L + L
Sbjct: 86  RGTEFRTEASSSRLAQLSLLDTLYVGL 112


>gi|284025469|ref|ZP_06379867.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus 132]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 355


>gi|87161602|ref|YP_495028.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161510647|ref|YP_001576306.1| glycine betaine/choline ABC transporter ATP-binding protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|87127576|gb|ABD22090.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160369456|gb|ABX30427.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|315197342|gb|EFU27679.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus CGS01]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 355


>gi|294498622|ref|YP_003562322.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
 gi|294348559|gb|ADE68888.1| CBS domain protein [Bacillus megaterium QM B1551]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 5/106 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+  A  ++ +   G V V  E  ++ G+IT+ DI  N     KD NT+   D M K+  
Sbjct: 20  PVTAAAKLMRDINCGSVPVCQEN-RVMGMITDRDIVLNCVADGKDCNTVHCHDCMTKDVI 78

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               DT +    +++  H I  ++VV++    +GI    DL    +
Sbjct: 79  TCSPDTDIHECARMMADHQIRRIIVVEN-NNMVGICAIGDLATVNV 123


>gi|239933402|ref|ZP_04690355.1| hypothetical protein SghaA1_34575 [Streptomyces ghanaensis ATCC
           14672]
 gi|291441768|ref|ZP_06581158.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344663|gb|EFE71619.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 219

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 52/129 (40%), Gaps = 18/129 (13%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------- 273
           D++  V+ G P  +   +L +     V VVD   +  G+++E D+               
Sbjct: 12  DAVVRVQRGTPFKEIAHLLQDYDITAVPVVDAEDRPVGVVSEADLLQKMWGGDPDEAVGH 71

Query: 274 ----RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
               R      + +    +M        ED  +  A + + +H I  L+VVD+  + IG+
Sbjct: 72  GEGPRPAGAKASAIDAAGLMTSPAVCAREDWSVVDAARAMARHGIKRLLVVDEGGRLIGL 131

Query: 330 VHFLDLLRF 338
           V   DLLR 
Sbjct: 132 VSRSDLLRV 140


>gi|194018070|ref|ZP_03056675.1| inosine-5'-monophosphate dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194010262|gb|EDW19839.1| inosine-5'-monophosphate dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V+  E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNIEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L ++DD     G++   D+
Sbjct: 165 ASVGTTLEEAEKILQQYKIEKLPLLDDEGTLKGLITIKDI 204


>gi|332535264|ref|ZP_08411066.1| hypothetical protein PH505_ck00070 [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332035295|gb|EGI71799.1| hypothetical protein PH505_ck00070 [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 422

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 60/126 (47%), Gaps = 19/126 (15%)

Query: 232 LVKIGCPLIDAITILSE---KRFG-CVAVVDE----GQKLKGIITE-GDIFRNFHK---- 278
           L+KI  P +  +  ++    + FG   A +DE     ++LK ++ E G +    H+    
Sbjct: 135 LLKILFPFVVIVNWMTNGILRLFGISAAQIDEHSMSKEELKTVLNESGALIPARHQSMLT 194

Query: 279 ---DLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              DL  ++VED+MI   +++   + D    ++ QL    +  VL+  D+   A+G +H 
Sbjct: 195 SILDLEQVTVEDIMIPRNEIVAIDINDDWKLISRQLTHAQHTRVLLYRDNIDDAVGFIHS 254

Query: 333 LDLLRF 338
            D LR 
Sbjct: 255 RDALRL 260


>gi|307354492|ref|YP_003895543.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus petrolearius
           DSM 11571]
 gi|307157725|gb|ADN37105.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus petrolearius
           DSM 11571]
          Length = 496

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 18/171 (10%)

Query: 175 PTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           P  S+ M       +AIAL  +       RN +  D        +  TL   A D++   
Sbjct: 46  PFVSSAMDTVTESGMAIALARAGCLGVLHRNMTAEDEV------EQVTLVKQADDIIER- 98

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +  V     + DA  ++       V V+ EG ++ GI++  D+ R         ++  
Sbjct: 99  -EVLTVNSQATVSDAARMMQNYSISGVPVM-EGDEIIGIVSRRDL-RWIASKKGDQNIRT 155

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA-IGIVHFLDLLR 337
           VM  NP  + ED  L  A++++  + +  L VV +  K  IGI+   DLL 
Sbjct: 156 VMTTNPITVNEDVKLEDALEVMYNNKVERLPVVSEGTKTLIGIITMQDLLE 206


>gi|296116325|ref|ZP_06834941.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295977144|gb|EFG83906.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 500

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T  D+   F  D      E +  +N   + +D     A QLL +H I  L+V+D
Sbjct: 142 RLVGILTNRDV--RFATDPGQRVYELMTRENLVTVRQDVAREQARQLLHRHRIEKLLVID 199

Query: 322 DCQKAIGIVHFLDL 335
           D  + +G++   D+
Sbjct: 200 DEDRCVGLITVKDM 213


>gi|297720703|ref|NP_001172713.1| Os01g0923300 [Oryza sativa Japonica Group]
 gi|255674011|dbj|BAH91443.1| Os01g0923300 [Oryza sativa Japonica Group]
          Length = 238

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVIL 297
           +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  +L
Sbjct: 81  EACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVL 140

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 141 SDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 176


>gi|251792304|ref|YP_003007029.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533696|gb|ACS96942.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 44/95 (46%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLL 302
           I  +  F    VVD  + L GIIT  D    F  D  T +V D+M    +++   ED   
Sbjct: 113 IAQKNGFAGYPVVDADKNLVGIITGRDT--RFVSD-TTKTVADLMTPKERLVTVKEDAQR 169

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               QL+ +H +  ++VVDD  K  G++   D  +
Sbjct: 170 EEIFQLMHEHRVEKVLVVDDNFKLKGMITLKDYQK 204


>gi|239943665|ref|ZP_04695602.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
 gi|291447130|ref|ZP_06586520.1| inosine 5' monophosphate dehydrogenase [Streptomyces roseosporus
           NRRL 15998]
 gi|291350077|gb|EFE76981.1| inosine 5' monophosphate dehydrogenase [Streptomyces roseosporus
           NRRL 15998]
          Length = 500

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +VM   P V  +
Sbjct: 114 LGEADALCAKFRISGVPVTDAAGKLLGIVTNRDMA--FESD-RSRQVREVMTPMPLVTGK 170

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  V AM+LLR+H I  L +VD+     G++   D 
Sbjct: 171 VGISGVEAMELLRRHKIEKLPLVDEAGLLKGLITVKDF 208


>gi|239828063|ref|YP_002950687.1| hypothetical protein GWCH70_2731 [Geobacillus sp. WCH70]
 gi|239808356|gb|ACS25421.1| CBS domain containing membrane protein [Geobacillus sp. WCH70]
          Length = 214

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 19/109 (17%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGD-------IFR------NFHKDLNTLSVED 287
           +AI ++ + R   + +VD    + GI+T+ D       IFR      +  K L+T+   D
Sbjct: 22  EAIQLVRQLRIRHIPIVDAENHVIGIVTDRDIRDASPSIFRIHEHLEDLQKPLSTIMKTD 81

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++ +P   +E+        L  +H IS L +V D  K +GIV   DLL
Sbjct: 82  VIVGHPLDFVEEI-----AALFYEHKISCLPIVQDG-KLVGIVTETDLL 124


>gi|148642235|ref|YP_001272748.1| homoserine O-acetyltransferase, MetX [Methanobrevibacter smithii
           ATCC 35061]
 gi|148551252|gb|ABQ86380.1| homoserine O-acetyltransferase, MetX [Methanobrevibacter smithii
           ATCC 35061]
          Length = 491

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 2/77 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VV  G+KL GI+T  D+ +    + N L  +++M K  K    D  +    + +R+ +
Sbjct: 404 IPVVTNGKKLIGIVTSWDLSKAIATNSNDL--KEIMTKTVKFCHADDSIESTARRMRKLD 461

Query: 314 ISVLMVVDDCQKAIGIV 330
           IS L VVDD  K  GI+
Sbjct: 462 ISCLPVVDDDFKLKGII 478


>gi|71907266|ref|YP_284853.1| cyclic nucleotide-binding/CBS/putative nucleotidyltransferase
           [Dechloromonas aromatica RCB]
 gi|71846887|gb|AAZ46383.1| Cyclic nucleotide-binding:CBS:Protein of unknown function DUF294,
           nucleotidyltransferase putative [Dechloromonas aromatica
           RCB]
          Length = 646

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V    PL  A+  +S+   G + +  E +K  G+ T  D+  R    DL  T  +   M 
Sbjct: 190 VSPDTPLRAALETMSQAGVGSLVIAGEDRKAVGVFTRTDLLDRVVLADLPLTTPIAQAMS 249

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +NP +I E      AM  +  H I  ++V D   K  G+V   DL 
Sbjct: 250 QNPFMIEEHATAYDAMFAMATHGIRHVLVTDAEGKLTGVVSERDLF 295


>gi|18978263|ref|NP_579620.1| hypothetical protein PF1891 [Pyrococcus furiosus DSM 3638]
 gi|18894084|gb|AAL82015.1| hypothetical protein PF1891 [Pyrococcus furiosus DSM 3638]
          Length = 174

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/122 (28%), Positives = 53/122 (43%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           VK   PL + I + + +    V VVD+  +L G IT  DI   F                
Sbjct: 47  VKPETPLFELIAMFNVEETSAV-VVDDENRLVGFITMKDILHYFMPPRRYSIVGIGLLKK 105

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   VED+M+K P  I  D  L  A++L+ +     L V+D+ +K  GI+   D++
Sbjct: 106 YGLTRASRVEDIMVKKPITIKIDDNLGNAIKLMVETGKHHLPVIDEERKVHGILEVKDII 165

Query: 337 RF 338
           R 
Sbjct: 166 RL 167


>gi|332798702|ref|YP_004460201.1| putative signal transduction protein with CBS and DRTGG domains
           [Tepidanaerobacter sp. Re1]
 gi|332696437|gb|AEE90894.1| putative signal transduction protein with CBS and DRTGG domains
           [Tepidanaerobacter sp. Re1]
          Length = 432

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 50/82 (60%), Gaps = 5/82 (6%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD+  K+ GI+T  DI  +  KD   + ++DVM K+P V+ +DT +  A +L+    I 
Sbjct: 224 VVDKNMKVCGIVTTNDI--SSLKD--DVLIKDVMSKDPIVLTKDTPVAHAARLMGWEGIK 279

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           ++ VV+D ++ +GI+   D ++
Sbjct: 280 LIPVVED-KRLVGILTRKDAIK 300


>gi|315641385|ref|ZP_07896460.1| CBS domain protein [Enterococcus italicus DSM 15952]
 gi|315482878|gb|EFU73399.1| CBS domain protein [Enterococcus italicus DSM 15952]
          Length = 213

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 5/114 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMI 290
           LV     + DAIT L     G + V+DE Q+L G+++  D+ R + + +++   V   M 
Sbjct: 90  LVTKDTTIRDAITTLFMYDVGSLYVIDESQELAGVLSRKDLLRASLNTNIDQTPVAICMT 149

Query: 291 KNP--KVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRFGI 340
           + P  KV  +D  +  A  +L+   +  L VV  D+  K IG +    +L + I
Sbjct: 150 RVPHIKVATKDMDILEAASILQDFEVDSLPVVSEDNHAKVIGKITKTKILNYLI 203


>gi|294848998|ref|ZP_06789743.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9754]
 gi|294824377|gb|EFG40801.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9754]
          Length = 410

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 263 IQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 357


>gi|229133096|ref|ZP_04261932.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|228650305|gb|EEL06304.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST196]
          Length = 284

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G++T+  ++I +S SGS+  L   L  A+     +IAITS  KS ++  A I L T  +E
Sbjct: 176 GLLTKKAVVIAISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLAHITLYTSTRE 235

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 236 TEFRTEA---SSSRLAQLSLLDTLYVGL 260


>gi|224826427|ref|ZP_03699529.1| inosine-5'-monophosphate dehydrogenase [Lutiella nitroferrum 2002]
 gi|224601528|gb|EEG07709.1| inosine-5'-monophosphate dehydrogenase [Lutiella nitroferrum 2002]
          Length = 487

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEG-DIFRNFHKDLNTLSVEDVMI 290
           +++  P++ A +  ++E R   +A+  EG    GII +   I R   +       E  ++
Sbjct: 37  IRLNLPMLSAAMDTVTEARL-AIAMAQEGGI--GIIHKNMSIERQAQEVSKVKRYESGVV 93

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+P  I  D L+   + L RQH IS L VV D  K +GIV   D LRF
Sbjct: 94  KDPITIAPDMLVCDLINLTRQHRISGLPVVQDG-KVVGIVTNRD-LRF 139


>gi|169337992|ref|ZP_02620682.2| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum C
           str. Eklund]
 gi|169296116|gb|EDS78249.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum C
           str. Eklund]
          Length = 487

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ ++++ R   V + +EG KL GIIT  DI    N+ + +  +   + +I       E
Sbjct: 111 DALDLMAKYRISGVPITEEG-KLVGIITNRDIAFETNYTQPIKNIMTSENLI----TAAE 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 166 NTTVEEAKEILKGHKIEKLPLVDKENNLKGLITIKDI 202


>gi|145637233|ref|ZP_01792895.1| bifunctional glutathionylspermidine amidase/glutathionylspermidine
           synthetase [Haemophilus influenzae PittHH]
 gi|145269678|gb|EDK09619.1| bifunctional glutathionylspermidine amidase/glutathionylspermidine
           synthetase [Haemophilus influenzae PittHH]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VVDE   L GIIT  D    F KDL+  +V  VM K   ++   E       ++L
Sbjct: 119 FAGYPVVDEENNLIGIITGRDT--RFVKDLSK-TVSQVMTKKEDLVTVKEGASREEILEL 175

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + QH +  ++VV+D  K  G++   D  +
Sbjct: 176 MHQHRVEKVLVVNDSFKLKGMITVKDFQK 204


>gi|75906870|ref|YP_321166.1| multi-sensor signal transduction histidine kinase [Anabaena
           variabilis ATCC 29413]
 gi|75700595|gb|ABA20271.1| multi-sensor signal transduction histidine kinase [Anabaena
           variabilis ATCC 29413]
          Length = 1741

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 58/112 (51%), Gaps = 15/112 (13%)

Query: 228 DSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLS 284
           D  PL V+   PL DA++ ++++  G   VV    ++ G ++E D+ +      DL T +
Sbjct: 18  DLSPLTVEPEMPLSDAVSQMAKQ--GAAIVVVANTQILGWLSERDVVKLVALGVDLQTTT 75

Query: 285 VEDVMIKNPKVIL------EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +  VM  N  +I       ED  +   + LLRQH  S L+VVD+ ++ +G +
Sbjct: 76  ISQVM--NTSIIFFQVAQFED--IGAIISLLRQHQSSCLLVVDEQEQLMGTI 123


>gi|304405772|ref|ZP_07387430.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
           curdlanolyticus YK9]
 gi|304345015|gb|EFM10851.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
           curdlanolyticus YK9]
          Length = 485

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 28/96 (29%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ + R   V +VD+  KL GI+T  D+   F  D  ++ + +VM +   V     
Sbjct: 110 DAEALMGKYRISGVPIVDDAGKLVGILTNRDL--RFVHDY-SMKINEVMTREELVTAPVG 166

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 167 TTLEQAEGILQKHKIEKLPLVDENNTLKGLITIKDI 202


>gi|117626092|ref|YP_859415.1| putative sugar isomerase [Escherichia coli APEC O1]
 gi|218560895|ref|YP_002393808.1| hypothetical protein ECS88_4262 [Escherichia coli S88]
 gi|115515216|gb|ABJ03291.1| putative sugar isomerase [Escherichia coli APEC O1]
 gi|218367664|emb|CAR05453.1| conserved hypothetical protein; putative sugar phosphate isomerase
           involved in capsule formation [Escherichia coli S88]
          Length = 196

 Score = 37.0 bits (84), Expect = 4.3,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G++G         L   G   +F+   E    + G     DL IV S SG + 
Sbjct: 49  RVFCYGLGRAGFSMKAFTMRLMHMGKEVYFL--TETITPNFG---PGDLFIVSSASGETA 103

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL----PKEPESCPHGLAPTTSAIM 181
           +L A+   AR+F   +  +T+   + +    D+++ +      + +S      P  S   
Sbjct: 104 QLVALAKKARQFGGAVAVLTTNRHATITEFVDVIVQINAPSKNQKDSVFRSAQPMASLYE 163

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L I DAL + +       E++ +  H
Sbjct: 164 QALLVIADALVMKMAAESGAPESELFKRH 192


>gi|134045384|ref|YP_001096870.1| CBS domain-containing protein [Methanococcus maripaludis C5]
 gi|132663009|gb|ABO34655.1| CBS domain containing protein [Methanococcus maripaludis C5]
          Length = 279

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V   D+M +   I  VK    LIDA+  ++E   G + VVD G+KL G+ITE DI +  +
Sbjct: 221 VRMQDIMKT--DIVSVKSEIKLIDAVKKMNELNIGVLPVVD-GEKLVGLITEKDIVKCIY 277

Query: 278 K 278
           K
Sbjct: 278 K 278


>gi|77359601|ref|YP_339176.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874512|emb|CAI85733.1| IMP dehydrogeanse [Pseudoalteromonas haloplanktis TAC125]
          Length = 489

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + DA+ +  EK F    V D    L GI+T  D+   F   L    V  VM K  K++  
Sbjct: 106 IADALELSQEKGFSGFPVTDSDNNLVGIVTGRDM--RFETKLEQ-PVSTVMTKKDKLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E       + L+ +H I  ++VVDD  K  G++   D  +
Sbjct: 163 NEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203


>gi|186680817|ref|YP_001864013.1| polynucleotide adenylyltransferase region [Nostoc punctiforme PCC
           73102]
 gi|186463269|gb|ACC79070.1| Polynucleotide adenylyltransferase region [Nostoc punctiforme PCC
           73102]
          Length = 898

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VVD   +L GII+  D+    H   +   V+  M  N K I  DT L     
Sbjct: 342 RYGHSGLSVVDAQGQLVGIISRRDLDIALHHGFSHAPVKGYMTTNLKTITPDTTLPQIES 401

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  ++I  L V+++ Q  +G+V   D+LR
Sbjct: 402 LMVTYDIGRLPVLENGQ-LVGLVTRTDVLR 430


>gi|255003909|ref|ZP_05278710.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Virginia]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVI 296
           L  A++++ +  +  + VV   Q KL GI+T  D+   F ++ N   V D+M   N   +
Sbjct: 102 LSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDV--RFVENKN-CKVSDIMTSTNLVTV 158

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 159 SEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 200


>gi|149239558|ref|XP_001525655.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451148|gb|EDK45404.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 652

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVA 305
           +R  CV VV E   L GI T  D+ FR     LN   +++  +M  NP   +E+   + A
Sbjct: 76  RRENCVLVVGEEGDLMGIFTAKDLAFRVVGAGLNAGNVTINKIMTPNPICTMENNPASDA 135

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIV 330
           + L+       L V ++ Q+ +GI+
Sbjct: 136 LTLMVDKGFRHLPVKNELQQVVGIL 160


>gi|18423173|ref|NP_568736.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|22327688|ref|NP_680412.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|8777387|dbj|BAA96977.1| unnamed protein product [Arabidopsis thaliana]
 gi|9758762|dbj|BAB09138.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008572|gb|AED95955.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
 gi|332008588|gb|AED95971.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 548

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           L +A   ++ +R   + + D    L GI+T+ DI  +   K LN     V  VM KNP  
Sbjct: 80  LFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVF 139

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DT+   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 140 VLSDTIAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 177


>gi|15640234|ref|NP_229861.1| hypothetical protein VC0204 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587553|ref|ZP_01677319.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153818549|ref|ZP_01971216.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821612|ref|ZP_01974279.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229506994|ref|ZP_04396502.1| transcriptional regulator RpiR family [Vibrio cholerae BX 330286]
 gi|229509364|ref|ZP_04398847.1| transcriptional regulator RpiR family [Vibrio cholerae B33]
 gi|229516311|ref|ZP_04405759.1| transcriptional regulator RpiR family [Vibrio cholerae RC9]
 gi|229524844|ref|ZP_04414249.1| transcriptional regulator RpiR family [Vibrio cholerae bv. albensis
           VL426]
 gi|229606502|ref|YP_002877150.1| transcriptional regulator RpiR family [Vibrio cholerae MJ-1236]
 gi|254851333|ref|ZP_05240683.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744016|ref|ZP_05417970.1| transcriptional regulator RpiR family [Vibrio cholera CIRS 101]
 gi|262153625|ref|ZP_06028752.1| transcriptional regulator RpiR family [Vibrio cholerae INDRE 91/1]
 gi|9654610|gb|AAF93380.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548191|gb|EAX58261.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126510888|gb|EAZ73482.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520899|gb|EAZ78122.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229338425|gb|EEO03442.1| transcriptional regulator RpiR family [Vibrio cholerae bv. albensis
           VL426]
 gi|229346737|gb|EEO11707.1| transcriptional regulator RpiR family [Vibrio cholerae RC9]
 gi|229353679|gb|EEO18616.1| transcriptional regulator RpiR family [Vibrio cholerae B33]
 gi|229356099|gb|EEO21018.1| transcriptional regulator RpiR family [Vibrio cholerae BX 330286]
 gi|229369157|gb|ACQ59580.1| transcriptional regulator RpiR family [Vibrio cholerae MJ-1236]
 gi|254847038|gb|EET25452.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738281|gb|EET93672.1| transcriptional regulator RpiR family [Vibrio cholera CIRS 101]
 gi|262030566|gb|EEY49203.1| transcriptional regulator RpiR family [Vibrio cholerae INDRE 91/1]
          Length = 282

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|328951634|ref|YP_004368969.1| CBS domain containing membrane protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451958|gb|AEB12859.1| CBS domain containing membrane protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 149

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 28/131 (21%), Positives = 55/131 (41%), Gaps = 25/131 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------------- 275
           V+   PL++A  ++   RFG + VVD   +L G++   D+                    
Sbjct: 8   VRADVPLLEAAQLMLRNRFGGLPVVDAEGRLVGLVEVEDLLPRMSAVPFSDVRAMRLFDE 67

Query: 276 --------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                    +++L  + V   + K+ +V+  D  L  A+  + ++    + VVD+  + +
Sbjct: 68  WVDRDLAELYEELRQVPVAKALRKDVEVLHPDDPLDQALDRMAENRFRRMPVVDETGRLV 127

Query: 328 GIVHFLDLLRF 338
           GI+   D LR 
Sbjct: 128 GILTRSDFLRL 138


>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
          Length = 147

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-- 282
             G  I  V+    +  A++++SEK  G V V+D+ QK+ GI +E D  R     + +  
Sbjct: 10  QKGADIWSVRPETTVFQALSLMSEKNVGAVVVLDDQQKMIGIFSERDYARKTIGAIGSQE 69

Query: 283 ----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               L V+++M      I  +T +   M L+ +     L V+++    IGI+   D+++
Sbjct: 70  CPRDLPVKELMTTEVVAIKPETGVETCMALMTKKRFRHLPVMEN-NALIGIISIGDIVK 127


>gi|163749381|ref|ZP_02156629.1| acetoin utilization protein AcuB, putative [Shewanella benthica
           KT99]
 gi|161330790|gb|EDQ01717.1| acetoin utilization protein AcuB, putative [Shewanella benthica
           KT99]
          Length = 140

 Score = 37.0 bits (84), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 45/93 (48%), Gaps = 13/93 (13%)

Query: 256 VVDEGQKLKGIITEGDIFRNF----------HKDLNTLS--VEDVMIKNPKVILEDTLLT 303
           +V E  KL+GI++E D  R             +D  TL      VM +NP  I  +  + 
Sbjct: 42  LVIEHDKLQGILSERDYLRTLSPNIGNINETERDSETLQRRAHQVMTRNPITISPNQTIR 101

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A +LL +H+I  L V+D   K  GI+ + DLL
Sbjct: 102 QASELLLKHDIGSLPVLDKG-KLTGIITWKDLL 133


>gi|308178047|ref|YP_003917453.1| IMP dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307745510|emb|CBT76482.1| IMP dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 501

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 1/104 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V  G  L +   + ++ R   + VVDE +KL GIIT  D      +   T  V +VM   
Sbjct: 103 VHPGATLAEWDELCAQYRVSGLPVVDENRKLLGIITNRDTRFVPRERYMTTKVYEVMTGM 162

Query: 293 PKVILEDTLLT-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P V   D +     ++LL ++ I  L ++D+  K  G++   D 
Sbjct: 163 PLVTAHDGVAPEKVIELLSKNRIEKLPLIDNDGKLTGLITVKDF 206


>gi|148825495|ref|YP_001290248.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae
           PittEE]
 gi|229846310|ref|ZP_04466418.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           7P49H1]
 gi|148715655|gb|ABQ97865.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           PittEE]
 gi|229810403|gb|EEP46121.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           7P49H1]
 gi|309972632|gb|ADO95833.1| Inosine-5-monophosphate dehydrogenase [Haemophilus influenzae
           R2846]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 43/89 (48%), Gaps = 5/89 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VVDE   L GIIT  D    F KDL+  +V  VM K   ++   E       ++L
Sbjct: 119 FAGYPVVDEENNLIGIITGRDT--RFVKDLSK-TVSQVMTKKEDLVTVKEGASREEILEL 175

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + QH +  ++VV+D  K  G++   D  +
Sbjct: 176 MHQHRVEKVLVVNDSFKLKGMITVKDFQK 204


>gi|315649175|ref|ZP_07902265.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Paenibacillus vortex V453]
 gi|315275394|gb|EFU38752.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Paenibacillus vortex V453]
          Length = 400

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + AS VM   ++I + +   P + A+ ++ E+    + V+D  +KL G+IT  D      
Sbjct: 273 LTASRVMRRPETITMDR--GPRV-ALELMRERGISNLFVIDRSKKLLGVITAEDASDAMK 329

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              N   +ED++I +   +  DTLL    ++     +  L VVDD  + +G++
Sbjct: 330 ---NNRKLEDILITDGPSVGPDTLLNELFEITSMSKVP-LAVVDDNGRLMGVI 378


>gi|304379648|ref|ZP_07362381.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|302752318|gb|ADL66495.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304341824|gb|EFM07730.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
          Length = 423

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 276 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 330

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 331 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 370


>gi|297795865|ref|XP_002865817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311652|gb|EFH42076.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKV 295
           L +A   ++ +R   + + D    L GI+T+ DI  +   K LN     V  VM KNP  
Sbjct: 80  LFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVMTKNPVF 139

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L DT+   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 140 VLSDTIAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 177


>gi|262051587|ref|ZP_06023808.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus 930918-3]
 gi|259160571|gb|EEW45594.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus 930918-3]
          Length = 410

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 263 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 357


>gi|254994667|ref|ZP_05276857.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Mississippi]
 gi|255002775|ref|ZP_05277739.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Puerto Rico]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVI 296
           L  A++++ +  +  + VV   Q KL GI+T  D+   F ++ N   V D+M   N   +
Sbjct: 102 LSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDV--RFVENKN-CKVSDIMTSTNLVTV 158

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 159 SEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 200


>gi|237748641|ref|ZP_04579121.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           OXCC13]
 gi|229380003|gb|EEO30094.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           OXCC13]
          Length = 487

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--E 298
           D I +  +  F    VVD G+K+ GIIT  D+   F ++L+   V  +M    K++   E
Sbjct: 107 DVIALTRQHGFSGFPVVD-GKKIVGIITNRDL--RFEEELDA-PVSKIMTPREKLVYVKE 162

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A +++ ++ +  ++VV+D  +  G++   D+L+
Sbjct: 163 GTTLEEAKRVMNRNRLERVLVVNDAFELRGLMTVKDILK 201


>gi|225849609|ref|YP_002729843.1| cbs domain containing protein [Persephonella marina EX-H1]
 gi|225646065|gb|ACO04251.1| cbs domain containing protein [Persephonella marina EX-H1]
          Length = 139

 Score = 37.0 bits (84), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT-LSVEDVMIKNPK 294
            P+ D   ++ +K  G V +V E  +  GI+T+ DI  R    D    + V+++M +NP 
Sbjct: 18  TPVKDVAKLMRDKNVGSVVIV-ENNRPVGIVTDRDIAIRVLGNDQPAEIPVKNIMTENPV 76

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + ED  +  A++ ++   +    VVD+     GIV   D +
Sbjct: 77  TLKEDEGIFEALERVKDVGVRRFPVVDNDGNLTGIVTIDDFV 118


>gi|331003523|ref|ZP_08327020.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412364|gb|EGG91755.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 484

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 5/100 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-L 297
           L DA  ++S+ R   V +  EG+KL GIIT  D+   F +D  T  + + M K   V  L
Sbjct: 106 LSDANELMSKYRISGVPIT-EGKKLVGIITNRDL--KFEEDF-TKKIAECMTKEHLVTAL 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E T L  A ++L +  +  L +VD      G++   D+ +
Sbjct: 162 EGTTLDEAKKILARARVEKLPIVDKNGNLKGLITIKDIEK 201


>gi|326381884|ref|ZP_08203577.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199310|gb|EGD56491.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 488

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VVD    L GIIT  D+   F  D  +  V +VM   P +   E      A+ L
Sbjct: 112 RISGLPVVDAAGDLVGIITNRDM--RFEHD-QSRPVSEVMTPAPLITASEGVSADAALGL 168

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   +  G++   D ++
Sbjct: 169 LRRHKIEKLPIVDGNGRLTGLITVKDFVK 197


>gi|297544088|ref|YP_003676390.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841863|gb|ADH60379.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 484

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           DA  +++  +   V + VD   KL GIIT  DI   F  DLN   +++VM K+  V    
Sbjct: 109 DAAELMARYKISGVPITVD--SKLVGIITNRDI--RFEDDLNK-PIKEVMTKDNLVTAPP 163

Query: 300 -TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A Q+L++H I  L +VD+     G++   D+
Sbjct: 164 GTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDI 200


>gi|222151961|ref|YP_002561121.1| hypothetical protein MCCL_1718 [Macrococcus caseolyticus JCSC5402]
 gi|222121090|dbj|BAH18425.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 285

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 53/124 (42%), Gaps = 2/124 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV+I G+G S  + + L   L +    +       ++   LG     D++ V S +  + 
Sbjct: 132 RVMIFGVGNSRVVATDLHVKLMNIDQSAILATDLLSAITLLGHYEAGDVLFVTSETSKNK 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +  I  YA+   I +I +T +  S     ADIVL + KE      G     +A  QL I
Sbjct: 192 VITDICKYAKEKGIKIILLTQKFSSPAIRMADIVLAMAKEENEINLGYMTVRTA--QLTI 249

Query: 186 GDAL 189
            D L
Sbjct: 250 VDVL 253


>gi|157364486|ref|YP_001471253.1| signal transduction protein [Thermotoga lettingae TMO]
 gi|157315090|gb|ABV34189.1| putative signal transduction protein with CBS domains [Thermotoga
           lettingae TMO]
          Length = 315

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 44/92 (47%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           IL  KR   + VVD  +KL GI++  DI +         +VE+ M KN   I  ++ L  
Sbjct: 40  ILRIKRISGLPVVDSERKLIGIVSIEDIIKALEGGYVDDTVEERMTKNVVSIQSNSTLKD 99

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++  +       VVD   K +GIV   D++
Sbjct: 100 VIEVFEKWPYGRFPVVDSENKLVGIVTKNDVM 131


>gi|321479038|gb|EFX89994.1| putative AMP-activated protein kinase gamma (2) subunit [Daphnia
           pulex]
          Length = 517

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 11/119 (9%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVE 286
           D++       P+I A+T   E+R   + +VD   +L  I ++ D+      K  N L + 
Sbjct: 379 DNVETASPDTPIITALTKFVERRVSALPIVDSQGRLVDIYSKFDVINLAAEKTYNNLDIT 438

Query: 287 DVMIKN---------PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                           K  L+D+L TV  +++R   +  L+VVD+  + IG++   D+L
Sbjct: 439 LTQANEHRNTWFEGVSKCHLDDSLGTVMEKIVRA-EVHRLVVVDNEDRVIGVISLSDIL 496


>gi|293557145|ref|ZP_06675699.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1039]
 gi|294614156|ref|ZP_06694077.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1636]
 gi|291593006|gb|EFF24594.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1636]
 gi|291600714|gb|EFF31012.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E1039]
          Length = 601

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIAL 193
              LA A+
Sbjct: 408 LTLLAKAI 415


>gi|302543267|ref|ZP_07295609.1| inosine-5'-monophosphate dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460885|gb|EFL23978.1| inosine-5'-monophosphate dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 500

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    L +A  + ++ R   V V D   KL GI+T  D+   F  D     V +VM   
Sbjct: 108 VRPDATLHEADALCAKFRISGVPVTDAAGKLLGIVTNRDMA--FEVDRGR-QVREVMTPM 164

Query: 293 PKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P V  +  +    AMQLLR+H I  L +VDD     G++   D ++
Sbjct: 165 PLVTGKVGISGDDAMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|160935337|ref|ZP_02082719.1| hypothetical protein CLOBOL_00232 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441695|gb|EDP19395.1| hypothetical protein CLOBOL_00232 [Clostridium bolteae ATCC
           BAA-613]
          Length = 497

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 73/173 (42%), Gaps = 24/173 (13%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P  SAIMQ    D +A+AL +    S        E    ++H   +    FV  SD   S
Sbjct: 53  PMVSAIMQSVSDDRMAVALAQEGGISFIYGSQAIEKQAEMIHKVKRYRAGFVV-SDSNVS 111

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTL 283
            D          L D + I  E     +AV  +GQ   KL GI+T  D +R      +T 
Sbjct: 112 PD--------MTLADVLAITEETGHSTIAVTADGQPNGKLLGIVTNKD-YRVSRMGPDT- 161

Query: 284 SVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V+D M     ++  D  T L  A  ++ +H I+ L +V+  Q+ + +V   D
Sbjct: 162 KVKDFMTTLDNLVYADESTTLKEANDIIWEHKINCLPLVNKNQELVYLVFRKD 214


>gi|57652263|ref|YP_187252.1| amino acid ABC transporter, ATP-binding protein [Staphylococcus
           aureus subsp. aureus COL]
 gi|88196382|ref|YP_501205.1| amino acid ABC transporter ATP-binding protein [Staphylococcus
           aureus subsp. aureus NCTC 8325]
 gi|151222559|ref|YP_001333381.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|221140792|ref|ZP_03565285.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus subsp. aureus str. JKD6009]
 gi|258451246|ref|ZP_05699279.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus A5948]
 gi|282920437|ref|ZP_06328160.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9765]
 gi|57286449|gb|AAW38543.1| amino acid ABC transporter, ATP-binding protein [Staphylococcus
           aureus subsp. aureus COL]
 gi|87203940|gb|ABD31750.1| amino acid ABC transporter, ATP-binding protein, putative
           [Staphylococcus aureus subsp. aureus NCTC 8325]
 gi|150375359|dbj|BAF68619.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|257861038|gb|EEV83853.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus A5948]
 gi|269942030|emb|CBI50442.1| putative glycine betaine/carnitine/cholinetransport ATP-binding
           protein [Staphylococcus aureus subsp. aureus TW20]
 gi|282594383|gb|EFB99369.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9765]
 gi|329315134|gb|AEB89547.1| Glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus subsp. aureus T0131]
 gi|329726626|gb|EGG63087.1| choline ABC transporter, ATP-binding protein OpuBA [Staphylococcus
           aureus subsp. aureus 21189]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 355


>gi|26250576|ref|NP_756616.1| hypothetical protein c4757 [Escherichia coli CFT073]
 gi|91213360|ref|YP_543346.1| hypothetical protein UTI89_C4398 [Escherichia coli UTI89]
 gi|237702846|ref|ZP_04533327.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|26111006|gb|AAN83190.1|AE016769_305 Hypothetical protein c4757 [Escherichia coli CFT073]
 gi|91074934|gb|ABE09815.1| hypothetical protein UTI89_C4398 [Escherichia coli UTI89]
 gi|222035532|emb|CAP78277.1| hypothetical protein LF82_584 [Escherichia coli LF82]
 gi|226903017|gb|EEH89276.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
          Length = 189

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G++G         L   G   +F+   E    + G     DL IV S SG + 
Sbjct: 42  RVFCYGLGRAGFSMKAFTMRLMHMGKEVYFL--TETITPNFG---PGDLFIVSSASGETA 96

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL----PKEPESCPHGLAPTTSAIM 181
           +L A+   AR+F   +  +T+   + +    D+++ +      + +S      P  S   
Sbjct: 97  QLVALAKKARQFGGAVAVLTTNRHATITEFVDVIVQINAPSKNQKDSVFRSAQPMASLYE 156

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L I DAL + +       E++ +  H
Sbjct: 157 QALLVIADALVMKMAAESGAPESELFKRH 185


>gi|222150286|ref|YP_002559439.1| hypothetical protein MCCL_0036 [Macrococcus caseolyticus JCSC5402]
 gi|222119408|dbj|BAH16743.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 149

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 24/97 (24%), Positives = 48/97 (49%), Gaps = 5/97 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG +    A  L   G  ++ V            I ++D+ ++ S SGS+  
Sbjct: 6   IFVAGKGRSGLVIQSFAMRLNQLGKKAYVVGETTTPS-----IQKNDVFVIASGSGSTAH 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           LK +   A+     ++ +++++KS +A  AD+ + LP
Sbjct: 61  LKLLAQTAKDNEAYVLLLSTKDKSPIADIADLTIVLP 97


>gi|117624782|ref|YP_853695.1| putative DNA-binding transcriptional regulator [Escherichia coli
           APEC O1]
 gi|237705070|ref|ZP_04535551.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91073460|gb|ABE08341.1| hypothetical protein UTI89_C2881 [Escherichia coli UTI89]
 gi|115513906|gb|ABJ01981.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226901436|gb|EEH87695.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|323949215|gb|EGB45106.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H252]
          Length = 306

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNTEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|81242084|gb|ABB62794.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 306

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK--------------AILYYA-----R 135
            V    A    +   + DDL++ +S++G   EL               AI  +      R
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQR 246

Query: 136 RFSIPLIAITSE----NKSVVACHADIVLT 161
           R S  L  I  E    + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATKSASISACHAQGMLT 276


>gi|89101305|ref|ZP_01174115.1| hypothetical protein B14911_05661 [Bacillus sp. NRRL B-14911]
 gi|89083981|gb|EAR63172.1| hypothetical protein B14911_05661 [Bacillus sp. NRRL B-14911]
          Length = 439

 Score = 37.0 bits (84), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD+  K++G+IT  DI  +  +     +++ +M K+P  +   T +  A  ++    I 
Sbjct: 227 VVDQNMKIQGMITSKDIMGHAPES----AIDKLMTKSPMTVNGKTSVASAAHMMVWEGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           VL V D+  +  GI+   D+L+
Sbjct: 283 VLPVADEANRLQGIISRQDVLK 304


>gi|330994634|ref|ZP_08318557.1| Inosine-5'-monophosphate dehydrogenase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758275|gb|EGG74796.1| Inosine-5'-monophosphate dehydrogenase [Gluconacetobacter sp.
           SXCC-1]
          Length = 500

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           G   V  E  +L GI+T  D+   F  D      E +  +N   +  +     A QLL +
Sbjct: 132 GLPVVERETNRLVGILTNRDV--RFATDPAQRVYELMTRENLVTVRNNADRDQARQLLHR 189

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I  L+VVDD  + IG++   D+ R
Sbjct: 190 HRIEKLLVVDDEDRCIGLITVKDMDR 215


>gi|303246714|ref|ZP_07332992.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
           JJ]
 gi|302492054|gb|EFL51932.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
           JJ]
          Length = 412

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 57/143 (39%), Gaps = 22/143 (15%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR- 274
           LF  A DVM +   +P      PL   +  +         VVD  + ++GII + D+ R 
Sbjct: 267 LFQQARDVMIT--DVPTAFPDTPLHQVVAAIVASPLRRAVVVDADKTVRGIILDSDLLRR 324

Query: 275 --------------NFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                         +F K   T      S  +VM  N   I ED  L   +Q +    + 
Sbjct: 325 CGPARKPGLIEALFSFGKPEETGACPTGSAAEVMEPNVLTIHEDATLMEVLQKMLAAKVK 384

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            L+VVDD  K +G+V    +LR 
Sbjct: 385 RLVVVDDAGKLLGMVDREAILRV 407


>gi|297559454|ref|YP_003678428.1| RpiR family transcriptional regulator [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843902|gb|ADH65922.1| transcriptional regulator, RpiR family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 327

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 59/132 (44%), Gaps = 3/132 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  +G+ L   L   G  SF    A        ++   D+ I +S SG++ 
Sbjct: 158 RIDVYGVGASAFVGADLQQKLHRIGLTSFAWSDAHVMLTSAALLDERDVAIGISHSGTTI 217

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +    L  A R     +A+T+  +S +   AD VLT      +   G   T S + QL +
Sbjct: 218 DTVQALTEAGRRGARTVAVTNFPRSPIG-FADHVLTTAARETTFRSGA--TASRLAQLTV 274

Query: 186 GDALAIALLESR 197
            D L + L +SR
Sbjct: 275 VDCLFVGLAQSR 286


>gi|254425959|ref|ZP_05039676.1| PAS fold family [Synechococcus sp. PCC 7335]
 gi|196188382|gb|EDX83347.1| PAS fold family [Synechococcus sp. PCC 7335]
          Length = 1186

 Score = 37.0 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 5/85 (5%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTV--A 305
           RF C  +V    +L GI TE D+ R   +D  L+ + +   M +  KV+    + TV   
Sbjct: 67  RFSCALIV-LADRLLGIFTERDLVRLVAEDADLSAMPISAAMTQPVKVLRRSQIGTVFTV 125

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIV 330
           +  L+Q++I  + +V+D    +GIV
Sbjct: 126 LSYLKQNHIRQVPIVEDSGSLVGIV 150


>gi|188588749|ref|YP_001919809.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499030|gb|ACD52166.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E3
           str. Alaska E43]
          Length = 484

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 51/99 (51%), Gaps = 7/99 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVI 296
           L DA  ++ + R   V + + G KL GI+T  D+    +F K ++ +  ++ +I  P   
Sbjct: 106 LQDAENLMGQYRISGVPITENG-KLVGILTNRDVTFETDFSKKISEVMTKENLITAP--- 161

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            E+T +  A ++L++H I  L +VD      G++   D+
Sbjct: 162 -ENTSIDEAKEILKKHKIEKLPLVDKDGNLKGLITIKDI 199


>gi|225458255|ref|XP_002281327.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 207

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
           + DA   ++E   G + V+  G+   + GI TE D  R      +      V ++M    
Sbjct: 82  VYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRSSKDTKVGEIMTDEN 141

Query: 294 KVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K++    DT +  AMQLL ++ I  + V+D   K +G++  +D++R
Sbjct: 142 KLVTVSSDTNILQAMQLLTEYQIRHVPVIDG--KIVGMISIVDIVR 185


>gi|323488456|ref|ZP_08093703.1| hypothetical protein GPDM_03910 [Planococcus donghaensis MPA1U2]
 gi|323397963|gb|EGA90762.1| hypothetical protein GPDM_03910 [Planococcus donghaensis MPA1U2]
          Length = 439

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            E   G   V+D   KL GIIT  D+  +   +L    VE VM K+P  +   T +  A 
Sbjct: 222 EETTHGGFPVIDHTNKLVGIITSRDVIGHSASEL----VEKVMTKDPLTVSMQTSVAAAG 277

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    I ++ V DD  K  G++   D+L+
Sbjct: 278 HRMIWEGIDLMPVADDHGKLKGVISRQDVLK 308


>gi|289577801|ref|YP_003476428.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus
           Ab9]
 gi|289527514|gb|ADD01866.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus
           Ab9]
          Length = 484

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           DA  +++  +   V + VD   KL GIIT  DI   F  DLN   +++VM K+  V    
Sbjct: 109 DAAELMARYKISGVPITVD--SKLVGIITNRDI--RFEDDLNK-PIKEVMTKDNLVTAPP 163

Query: 300 -TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A Q+L++H I  L +VD+     G++   D+
Sbjct: 164 GTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDI 200


>gi|228914869|ref|ZP_04078475.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228844785|gb|EEM89830.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 112

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS   L   L  A+     +IAITS  KS ++   DI L T  +E
Sbjct: 4   GLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRE 63

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E     +  ++S + QL++ D L + L
Sbjct: 64  TE---FRIEASSSRLAQLSLIDTLYVGL 88


>gi|222474805|ref|YP_002563220.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Florida]
 gi|222418941|gb|ACM48964.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Florida]
          Length = 493

 Score = 37.0 bits (84), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVI 296
           L  A++++ +  +  + VV   Q KL GI+T  D+   F ++ N   V D+M   N   +
Sbjct: 107 LSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDV--RFVENKN-CKVSDIMTSTNLVTV 163

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 164 SEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 205


>gi|323455259|gb|EGB11128.1| hypothetical protein AURANDRAFT_62039 [Aureococcus anophagefferens]
          Length = 1153

 Score = 37.0 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 6/98 (6%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSG-HIGS-KLASTLASTGTPSFFVHAAEAS 102
           ++G L   F    + +     R VITG  ++G H  S K+   +      SFF H A+  
Sbjct: 501 VRGPLGLMF----DDLAGSSNRAVITGTTETGEHFASLKVGDEIVGVAGESFFEHEADVE 556

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            G  G+ T+DD+  +L+ +    E    +   RR + P
Sbjct: 557 AGGEGLFTQDDVYDMLAEAVERGEYPFKVQVRRRAAAP 594


>gi|229551290|ref|ZP_04440015.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|258540955|ref|YP_003175454.1| transcriptional regulator RpiR family [Lactobacillus rhamnosus Lc
           705]
 gi|229315249|gb|EEN81222.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|257152631|emb|CAR91603.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus Lc
           705]
          Length = 315

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 1/101 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+  S  +   L   L   G  + F   A  +   +   T  D ++V S+SG + E
Sbjct: 133 IYLVGMSASALVAQDLYLKLIRAGYLAIFDADAHTALERVYYTTAADAVVVFSYSGLTKE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK-EP 166
           +      ARR   P+IA+T    S +   A  V+ LP  EP
Sbjct: 193 VVLAAQQARRNQTPVIAVTRAEPSPLRDAASCVIALPPTEP 233


>gi|320539247|ref|ZP_08038917.1| N-acetylmuramic acid 6-phosphate etherase [Serratia symbiotica str.
           Tucson]
 gi|320030639|gb|EFW12648.1| N-acetylmuramic acid 6-phosphate etherase [Serratia symbiotica str.
           Tucson]
          Length = 297

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 23/143 (16%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-GTP------------SF 94
           E++     AV  +KA   R++  G G SG +G   AS    T G P              
Sbjct: 47  EIAQAVDLAVVALKA-GARLIYLGAGTSGRLGVLDASECTPTFGVPYGRAVGLIAGGYGA 105

Query: 95  FVHAAEASHGDLGM---------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            + A E +  D+ +         +T  D+++ L+ SG +  +   L YAR+   P  AI+
Sbjct: 106 LLKAVEGAEDDVSLGVSDLQALNLTASDMVVGLAASGRTPYVIGALRYARQLGCPTAAIS 165

Query: 146 SENKSVVACHADIVLTLPKEPES 168
               S +A  A + ++    PE+
Sbjct: 166 CNPDSPLAHEAQVAISPVVGPEA 188


>gi|300814048|ref|ZP_07094332.1| putative inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp.
           oral taxon 836 str. F0141]
 gi|300511840|gb|EFK39056.1| putative inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp.
           oral taxon 836 str. F0141]
          Length = 263

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 8/98 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVIL 297
           DA  ++   +   V ++D+  +L+GIIT  DI     N  K    ++ E+++   P + L
Sbjct: 107 DASELMERYKISGVPIIDDKGRLEGIITNRDIRFETDNKRKIKEVMTSENLITGTPGISL 166

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E+     A+++L+ H I  L +VD      G++   D+
Sbjct: 167 EE-----ALKILKGHKIEKLPLVDKNNILKGLITIKDI 199


>gi|317131280|ref|YP_004090594.1| inosine-5'-monophosphate dehydrogenase [Ethanoligenens harbinense
           YUAN-3]
 gi|315469259|gb|ADU25863.1| inosine-5'-monophosphate dehydrogenase [Ethanoligenens harbinense
           YUAN-3]
          Length = 491

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA  ++ + R   V + + G KL GIIT  D+   F  D +T  V DVM K   V     
Sbjct: 115 DADALMGKYRISGVPICENG-KLVGIITNRDL--RFITDFDT-KVSDVMTKEHLVTAPVG 170

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T    A  +L +H I  L++VDD  +  G++   D+ +
Sbjct: 171 TTPEQAKSILMKHKIEKLLIVDDEGRLKGLITIKDIEK 208


>gi|258425009|ref|ZP_05687880.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus A9635]
 gi|257844843|gb|EEV68886.1| glycine betaine/L-proline transport ATP-binding subunit
           [Staphylococcus aureus A9635]
          Length = 408

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDRDNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLI 355


>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
 gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
           extorquens DM4]
          Length = 143

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 19/47 (40%), Positives = 28/47 (59%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G S+  V+   PL DAI +L+E   G + V+ E + + GII+E DI 
Sbjct: 11  GSSVVTVRPDDPLADAIHLLTENGIGALVVMGEARTVVGIISERDIM 57


>gi|124515288|gb|EAY56798.1| Inosine-5'-monophosphate dehydrogenase [Leptospirillum rubarum]
          Length = 489

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A+ I++  R   + V+ + +KL GI+T  D+   F  D N   V DVM     V     
Sbjct: 109 EALNIMATYRISGIPVI-KNRKLVGIVTNRDL--RFEMDGNR-KVSDVMTSRKLVTAPVG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A  L ++H+I  L VVD+  +  G++   D+
Sbjct: 165 TTLEAAKDLFQKHHIEKLPVVDEKNELQGLITIKDI 200


>gi|219668829|ref|YP_002459264.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Desulfitobacterium hafniense DCB-2]
 gi|219539089|gb|ACL20828.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Desulfitobacterium hafniense DCB-2]
          Length = 379

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++ + + + D+M  NP +IL      VA+  +RQ     L+V D+  K +GI+   +L
Sbjct: 243 YQNPDYIPITDIMRDNPAIILPSKTPVVAISFMRQRKTDTLIVCDEKGKLLGIIPSYEL 301


>gi|330014351|ref|ZP_08307907.1| putative N-acetylmuramic acid 6-phosphate etherase [Klebsiella sp.
           MS 92-3]
 gi|328533179|gb|EGF59947.1| putative N-acetylmuramic acid 6-phosphate etherase [Klebsiella sp.
           MS 92-3]
          Length = 310

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 22/157 (14%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG------------TPSFFVHAAEASHGDLGMI--- 109
           GR+VI G G SG    +  S  +  G            T +       A++ DLG     
Sbjct: 69  GRLVIIGAGASGRTAIEAVSDYSPEGKHALMGLIAGGQTAAMAERETAANNYDLGAFELQ 128

Query: 110 ----TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
               +  D+++ L+ SG +  +   + +A     P+  IT +  S  A  ADI++     
Sbjct: 129 SLDFSNRDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVITQQPTSEAAQLADIIIAPQTG 188

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL--AIALLESRNFS 200
           PE+   GLA   + + Q  I + L   +A+ + R +S
Sbjct: 189 PEAVA-GLANPKAQLAQRQIVNMLTTGLAIRDGRVYS 224


>gi|118489093|gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 555

 Score = 37.0 bits (84), Expect = 4.8,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVMIKN 292
           G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  +M +N
Sbjct: 84  GTTVFDACRRMAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTRN 143

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  +  D+L   A+Q + Q     L VV++ +    ++  LD+ R
Sbjct: 144 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITR 184


>gi|288929892|ref|ZP_06423734.1| N-acetylmuramic acid 6-phosphate etherase [Prevotella sp. oral
           taxon 317 str. F0108]
 gi|288328711|gb|EFC67300.1| N-acetylmuramic acid 6-phosphate etherase [Prevotella sp. oral
           taxon 317 str. F0108]
          Length = 273

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 43/174 (24%), Positives = 70/174 (40%), Gaps = 23/174 (13%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++ ++  T +  LR I AE R ++        +++      V ++K   GR+   G G S
Sbjct: 13  YNNLETKTAEELLRDINAEDRKVAEAVEKTIPQVAKLVELIVPRMKR-GGRIFYMGAGTS 71

Query: 76  GHIGSKLASTLAST-GTPSFFV------------HAAEASHGDLGM---------ITRDD 113
           G +G   AS L  T G P   V            +A E +  D            I   D
Sbjct: 72  GRLGVLDASELPPTFGVPKTLVIGLIAGGDTALRNAVENAEDDEERGWDELTEFNINEKD 131

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +I ++ SG++  +   L  AR   I    ITS   S +A  +D+ + +   PE
Sbjct: 132 TVIGIAASGTTPYVVGALRSAREHGILTACITSNPDSPMAAESDVAIEMVVGPE 185


>gi|242399976|ref|YP_002995401.1| hypothetical protein TSIB_2005 [Thermococcus sibiricus MM 739]
 gi|242266370|gb|ACS91052.1| hypothetical protein TSIB_2005 [Thermococcus sibiricus MM 739]
          Length = 176

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 25/144 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------- 272
           SD+M    S+P+V +  P++D + +L  +    V    E  KL+G+I   D+        
Sbjct: 17  SDIMPPVISMPIVTLDSPIVDVLKLLRTRHHVWVVSDKESMKLEGVIRYLDVICILLPPE 76

Query: 273 -----FRNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                F N      ++        DVM  N   I E+  +  A+  +R++ + +L ++D+
Sbjct: 77  NTKARFGNISAIFKSILGGAEKAADVMEHNIMTIDENATVLDALIKMRRYKVQILAIIDE 136

Query: 323 CQKAIG-------IVHFLDLLRFG 339
                G       I  FL L++ G
Sbjct: 137 KGTLKGEISLRLLIDEFLRLMKVG 160


>gi|73959173|ref|XP_865208.1| PREDICTED: similar to Chloride channel protein 7 (ClC-7) isoform 2
           [Canis familiaris]
          Length = 438

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ + + M  +P  + +D  L    +L R   +  L+VVD+C + +G+V   DL R+
Sbjct: 367 TMDLSEFMNPSPYTVPQDASLPRVFKLFRALGLRHLVVVDNCNQVVGLVTRKDLARY 423


>gi|110642723|ref|YP_670453.1| putative DNA-binding transcriptional regulator [Escherichia coli
           536]
 gi|162138389|ref|YP_541872.2| putative DNA-binding transcriptional regulator [Escherichia coli
           UTI89]
 gi|191172641|ref|ZP_03034180.1| transcriptional regulator, RpiR family [Escherichia coli F11]
 gi|218559481|ref|YP_002392394.1| DNA-binding transcriptional regulator [Escherichia coli S88]
 gi|218690676|ref|YP_002398888.1| putative DNA-binding transcriptional regulator [Escherichia coli
           ED1a]
 gi|300974169|ref|ZP_07172487.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|331658705|ref|ZP_08359649.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA206]
 gi|110344315|gb|ABG70552.1| hypothetical protein YfhH [Escherichia coli 536]
 gi|190907114|gb|EDV66714.1| transcriptional regulator, RpiR family [Escherichia coli F11]
 gi|218366250|emb|CAR03997.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli S88]
 gi|218428240|emb|CAR09157.2| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli ED1a]
 gi|222034266|emb|CAP77007.1| Uncharacterized HTH-type transcriptional regulator [Escherichia
           coli LF82]
 gi|294492341|gb|ADE91097.1| transcriptional regulator, RpiR family [Escherichia coli IHE3034]
 gi|300308908|gb|EFJ63428.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|307625891|gb|ADN70195.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UM146]
 gi|312947132|gb|ADR27959.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315288037|gb|EFU47439.1| transcriptional regulator, RpiR family [Escherichia coli MS 110-3]
 gi|315300513|gb|EFU59742.1| transcriptional regulator, RpiR family [Escherichia coli MS 16-3]
 gi|323955797|gb|EGB51555.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H263]
 gi|324013579|gb|EGB82798.1| transcriptional regulator, RpiR family [Escherichia coli MS 60-1]
 gi|331054370|gb|EGI26397.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA206]
          Length = 282

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNTEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|296241812|ref|YP_003649299.1| hypothetical protein Tagg_0065 [Thermosphaera aggregans DSM 11486]
 gi|296094396|gb|ADG90347.1| hypothetical protein Tagg_0065 [Thermosphaera aggregans DSM 11486]
          Length = 328

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 37/141 (26%), Positives = 68/141 (48%), Gaps = 15/141 (10%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT-PSFFVHAA 99
           LE S Q  ++ +   +V   +  +  +++ G+G SG +G  L++  A   + P   V   
Sbjct: 6   LEWSRQARIALEKPVSVRFNRGFRS-IIVAGMGGSGIVGDVLSTLSAKYSSLPVITVK-- 62

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN--KSVVACHAD 157
             +H   G  + +DL++V+S+SG++ E   I   A   +IP++ ++S    K+    H  
Sbjct: 63  --NHILPGYTSPEDLLLVVSYSGNTIETLRIFDSALERNIPMVTVSSGGLLKTRAYEHGI 120

Query: 158 IVLTLPKEPESCPHGLAPTTS 178
             + LP+       GLAP  S
Sbjct: 121 PHVKLPE-------GLAPRAS 134


>gi|288553711|ref|YP_003425646.1| transcriptional regulator with CBS and DRTGG domains [Bacillus
           pseudofirmus OF4]
 gi|288544871|gb|ADC48754.1| transcriptional regulator with CBS and DRTGG domains [Bacillus
           pseudofirmus OF4]
          Length = 435

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 21/82 (25%), Positives = 42/82 (51%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V+DE  +++G++   D+     +      +E VM KNP  + E T +     ++    I 
Sbjct: 227 VIDEHMRIQGMVAAKDVLGATKQT----PIEKVMTKNPITVNERTSVASVAHVMVWEGIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           +L V+D  ++ IG++   D+L+
Sbjct: 283 LLPVIDSQRRLIGVISRQDVLK 304


>gi|228993339|ref|ZP_04153255.1| hypothetical protein bpmyx0001_40710 [Bacillus pseudomycoides DSM
           12442]
 gi|228766407|gb|EEM15050.1| hypothetical protein bpmyx0001_40710 [Bacillus pseudomycoides DSM
           12442]
          Length = 437

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 4/90 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D+     K+     +E VM K P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKDMI-GIAKET---PIEKVMTKQPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++    I +L VVD+  +  GI+   D+L+
Sbjct: 275 MMVWEGIELLPVVDESNRLQGIISRQDVLQ 304


>gi|153009268|ref|YP_001370483.1| CBS domain-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
          Length = 143

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 4/102 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILE 298
           A+ +L++ + G + V DE  ++KGI++E D+ R          ++ V +VM    +V  E
Sbjct: 26  AVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVAAQETKAMSMPVTEVMTAKVQVCRE 85

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +   M+++ +      M V++  K +GI+   D+++  I
Sbjct: 86  HHTINQVMEIMTRSRFR-HMPVEEHGKLVGIISIGDVVKRRI 126


>gi|15921694|ref|NP_377363.1| hypothetical protein ST1405 [Sulfolobus tokodaii str. 7]
 gi|15622481|dbj|BAB66472.1| 300aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 300

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLR 310
           G   + +EG+ L GI+T  DI + F +      V + M  N   I  ED +LT   ++L 
Sbjct: 205 GAPVLDNEGKTL-GILTTADIIKAFFEGKYDAKVSEYMKSNVISIRDEDDILTAIKKML- 262

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +N+  L+V +  QK IGIV   D+L+
Sbjct: 263 IYNVGRLLVYNQDQKVIGIVTRTDILK 289


>gi|116493383|ref|YP_805118.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103533|gb|ABJ68676.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Pediococcus pentosaceus ATCC 25745]
          Length = 397

 Score = 37.0 bits (84), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           + I  P++ A+ I+  +R   + V D  Q LKG+++   I   +H  K +  +   +V  
Sbjct: 262 IAIDQPVVRALDIMHSRRVDTLLVTDAEQHLKGVVSIEKINEYYHSGKTVGEIMDPNVFY 321

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            N   I+ DT+  +  + LR      + VVD+ +K +GIV
Sbjct: 322 VNENSIIRDTVDRILKRGLRN-----VPVVDNDRKLVGIV 356


>gi|323439677|gb|EGA97396.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O11]
          Length = 423

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 276 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 330

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 331 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 370


>gi|312898172|ref|ZP_07757563.1| phosphoheptose isomerase [Megasphaera micronuciformis F0359]
 gi|310620669|gb|EFQ04238.1| phosphoheptose isomerase [Megasphaera micronuciformis F0359]
          Length = 193

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/59 (30%), Positives = 34/59 (57%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           G+    D++I +S SG+S  +   +  A+   I +IA+T EN  ++A  +D+ L +P +
Sbjct: 111 GLGQEGDVLIAISTSGNSANVVKAVKTAKEKGIYVIALTGENGGILAKESDLCLAVPSQ 169


>gi|282917802|ref|ZP_06325552.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus subsp. aureus D139]
 gi|283767533|ref|ZP_06340448.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus subsp. aureus H19]
 gi|282318087|gb|EFB48447.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus subsp. aureus D139]
 gi|283461412|gb|EFC08496.1| osmoprotectant transport system ATP-binding protein [Staphylococcus
           aureus subsp. aureus H19]
          Length = 410

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 263 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 357


>gi|260893008|ref|YP_003239105.1| inosine-5'-monophosphate dehydrogenase [Ammonifex degensii KC4]
 gi|260865149|gb|ACX52255.1| inosine-5'-monophosphate dehydrogenase [Ammonifex degensii KC4]
          Length = 489

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           +A+ ++   R   V +V++  KL GIIT  DI    NF + +  +  ++ +I  P     
Sbjct: 110 EAMELMERYRISGVPIVEKNGKLVGIITNRDIRFETNFDQPIKNVMTKENLITAPV---- 165

Query: 299 DTLLTVAMQLLRQHNISVLMVVDD 322
            T L  A +++R++ I  L +VD+
Sbjct: 166 GTTLEKAKEIMRRYKIEKLPLVDE 189


>gi|183599960|ref|ZP_02961453.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
 gi|188022235|gb|EDU60275.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
          Length = 623

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 5/97 (5%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSV 285
           +I ++  G  + DA   +  K      V+D G+ L GIIT+ D+ +       D+ T  V
Sbjct: 164 NIVVITPGTSVQDAAQEMVRKHRSSALVMD-GETLLGIITDRDLTKRVVALGLDIKT-PV 221

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
             VM +NP  I  +  +  A++L+ QHNI  L V+ +
Sbjct: 222 SKVMTENPITIAANAPIINAIELMMQHNIRSLPVMTN 258


>gi|170759184|ref|YP_001787040.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169406173|gb|ACA54584.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 381

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 3/64 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     VE+VM K PK +LE
Sbjct: 271 LLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDK---LVEEVMNKEPKYVLE 327

Query: 299 DTLL 302
           DT L
Sbjct: 328 DTSL 331


>gi|204929510|ref|ZP_03220584.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204321229|gb|EDZ06429.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 282

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+V TGIG SG +    A  L   G  +       A    +  +  +DL++ +S+SG   
Sbjct: 134 RIVTTGIGASGLVAQNFAWKLLKIGINAVVERDMHALLATVQALAPEDLLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL        R    ++AIT  + + +   A   L    E ++       +T A  Q+ +
Sbjct: 194 ELNLAADETLRAGAKILAITGFSPNALQQRATRCLYTIAEEQATRSAAISSTHA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|154687511|ref|YP_001422672.1| opuCA [Bacillus amyloliquefaciens FZB42]
 gi|154353362|gb|ABS75441.1| OpuCA [Bacillus amyloliquefaciens FZB42]
          Length = 379

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           VE +M K P  +  D  L+ A+Q++R+H +  L+VVDD     G V
Sbjct: 251 VEQMMNKKPVTVTADKTLSQAIQVMREHRVDSLLVVDDLNVLQGYV 296


>gi|152970105|ref|YP_001335214.1| hypothetical protein KPN_01553 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262044090|ref|ZP_06017167.1| N-acetylmuramic acid 6-phosphate etherase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|150954954|gb|ABR76984.1| hypothetical protein KPN_01553 [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|259038559|gb|EEW39753.1| N-acetylmuramic acid 6-phosphate etherase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 310

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 22/157 (14%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG------------TPSFFVHAAEASHGDLGMI--- 109
           GR+VI G G SG    +  S  +  G            T +       A++ DLG     
Sbjct: 69  GRLVIIGAGASGRTAIEAVSDYSPEGKHALVGLIAGGQTAAMAERETAANNYDLGAFELQ 128

Query: 110 ----TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
               +  D+++ L+ SG +  +   + +A     P+  IT +  S  A  ADI++     
Sbjct: 129 SLDFSNRDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVITQQPTSEAAQLADIIIAPQTG 188

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL--AIALLESRNFS 200
           PE+   GLA   + + Q  I + L   +A+ + R +S
Sbjct: 189 PEAVA-GLANPKAQLAQRQIVNMLTTGLAIRDGRVYS 224


>gi|92112862|ref|YP_572790.1| inosine-5'-monophosphate dehydrogenase [Chromohalobacter salexigens
           DSM 3043]
 gi|91795952|gb|ABE58091.1| inosine-5'-monophosphate dehydrogenase [Chromohalobacter salexigens
           DSM 3043]
          Length = 489

 Score = 37.0 bits (84), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 8/100 (8%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVIL 297
           L D + +  E  +    VV EG  L GI+T  D+ FR    D    SV ++M    K++ 
Sbjct: 106 LADLLEMADEYGYSGFPVV-EGDTLMGIVTGRDMRFRPDKGD----SVAEIMTPREKLVT 160

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             E T L +    L++H I  ++VVDD  +  G+V   D+
Sbjct: 161 VPEGTSLDIIKSKLQEHRIEKILVVDDQFRLRGLVTVRDI 200


>gi|317129926|ref|YP_004096208.1| signal transduction protein with CBS and DRTGG domains [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474874|gb|ADU31477.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus cellulosilyticus DSM 2522]
          Length = 435

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 8/84 (9%)

Query: 256 VVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD+  K++GI+T  D+     F      + VE VM K P  +   T +  A   +    
Sbjct: 226 VVDDNLKIQGIVTAKDVMGVSPF------IEVEKVMTKQPITVTSQTSVASAAHRMVWEG 279

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I +L V+D  ++ +GI+   D+L+
Sbjct: 280 IEILPVIDSGKRLLGIISRQDVLK 303


>gi|260585064|ref|ZP_05852806.1| inosine-5'-monophosphate dehydrogenase [Granulicatella elegans ATCC
           700633]
 gi|260157260|gb|EEW92334.1| inosine-5'-monophosphate dehydrogenase [Granulicatella elegans ATCC
           700633]
          Length = 492

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +A  ++++ R   V +V+  E +KL GI+T  D+   F  D  ++ +E+VM K P +   
Sbjct: 112 EAEELMAKYRISGVPIVESFENKKLVGILTNRDL--RFITDY-SIEIEEVMTKEPLITAP 168

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 169 VGTSLKEAESILQRHKIEKLPLVDEKGNLSGLITIKDI 206


>gi|226948963|ref|YP_002804054.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|226841403|gb|ACO84069.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A2 str. Kyoto]
          Length = 381

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 3/92 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     VE+VM K PK +LE
Sbjct: 271 LLQAREIMRDKKVDSLLVIDKERILLGYIKLEDIQKIKEKDK---LVEEVMNKEPKYVLE 327

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DT L   +          L V D   K +G++
Sbjct: 328 DTSLPELLDKFNNLKRGYLPVRDSEGKLLGLI 359


>gi|109156397|gb|ABG26348.1| hexulose-6-phosphate synthase and isomerase [Methylomonas sp. 16a]
          Length = 394

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 25/109 (22%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTG----------TPSFFVHAAEASHGDLGMITRDDLI 115
           R+ ++G G+SG IG   A  L  +G          TPS               I   DL+
Sbjct: 251 RIFVSGAGRSGLIGRFFAMRLMHSGYDVSVVGEIVTPS---------------IKAGDLL 295

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           I++S SG +++L A    A+     +  I++++ S +   AD+ L + +
Sbjct: 296 IIISGSGETEQLIAFTKKAKEIGAKICLISAKDDSTIGDMADVTLQIGR 344


>gi|119944823|ref|YP_942503.1| N-acetylmuramic acid-6-phosphate etherase [Psychromonas ingrahamii
           37]
 gi|166231082|sp|A1STT9|MURQ_PSYIN RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|119863427|gb|ABM02904.1| glucokinase regulatory-like protein [Psychromonas ingrahamii 37]
          Length = 299

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 22/126 (17%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLAST-GTPSFFVHAA-------------------EASH 103
           KGR++  G G SG +G   AS    T GTP+  V A                    +A  
Sbjct: 64  KGRLIYCGAGTSGRLGILDASECPPTFGTPAKQVMALIAGGHRAILKAVENAEDNLQAGQ 123

Query: 104 GDLGMIT--RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            DL  I    +D+++ ++ SGS+  +   + YA+  +  +IAI     S+++   D+ + 
Sbjct: 124 SDLQNINFNENDILVGIAASGSTPYVIGAMRYAKSINAQVIAINCNPNSLMSKECDVNIC 183

Query: 162 LPKEPE 167
               PE
Sbjct: 184 AVVGPE 189


>gi|323345875|gb|EGA80216.1| Imd2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 414

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KL G++T  DI   F +D ++L V+DVM KNP    +   L+   ++L++     L+VVD
Sbjct: 51  KLVGVVTSRDI--QFVED-SSLLVQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVD 107

Query: 322 DCQKAIGIVHFLDLLR 337
           +    + ++   DL++
Sbjct: 108 EKGNLVSMLSRTDLMK 123


>gi|304405564|ref|ZP_07387223.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Paenibacillus curdlanolyticus YK9]
 gi|304345603|gb|EFM11438.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Paenibacillus curdlanolyticus YK9]
          Length = 639

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 15/117 (12%)

Query: 58  EKIKAIKGRVVITGIGKSGHIG-------SKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
           E++K I+ +V I   G + H G        ++A     T   S + + +        +IT
Sbjct: 317 EQVKGIR-KVHIVACGTAYHAGLVGKTVIERMARIPVETDVASEYRYRSP-------IIT 368

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            D L+IV+S SG + +  A L  A+R    ++AIT+   S VA  AD VL     PE
Sbjct: 369 PDTLVIVVSQSGETADTLAALREAKRNGARVLAITNVVGSSVAREADDVLITWAGPE 425


>gi|283850657|ref|ZP_06367944.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
 gi|283573900|gb|EFC21873.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
          Length = 154

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           ++VM S   + L   G PL  A  IL  +++GC+ VV+ G KL GI+T  D  R
Sbjct: 80  AEVMKS--DVALASPGLPLRQAAEILLTQKYGCLPVVESG-KLVGILTASDFIR 130


>gi|268611345|ref|ZP_06145072.1| glucosamine--fructose-6-phosphate aminotransferase [Ruminococcus
           flavefaciens FD-1]
          Length = 531

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 6/147 (4%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH-AAEASHGDLGMITR 111
           F+   E+IK I   V I   G + H+G  +   + S  + S  V  A+E  + ++ +  +
Sbjct: 205 FNLTDEEIKEID-TVYIIACGSAYHVGVAIQYVIESLTSLSVRVELASEFRYREMKL-RQ 262

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           + L+IV+S SG + +  A L  ++   I  + I +   S +A  AD V      PE    
Sbjct: 263 NSLVIVISQSGETADTLAALRMSKDRGIKTLGIVNVVGSSIAREADNVFYTLAGPEIS-- 320

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
            +A T +   QL  G  LA+   +SR+
Sbjct: 321 -VATTKAYSCQLVAGYLLALQFAKSRS 346


>gi|257898287|ref|ZP_05677940.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium Com15]
 gi|257836199|gb|EEV61273.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium Com15]
          Length = 601

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSKKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLGYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIAL 193
              LA A+
Sbjct: 408 LTLLAKAI 415


>gi|217967139|ref|YP_002352645.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
           6724]
 gi|217336238|gb|ACK42031.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
           6724]
          Length = 493

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 55/100 (55%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A++I+++     + VV+   KL GI+T  D+   F  D+N   V ++M K+  +I+   
Sbjct: 111 EALSIMAKYHISGLPVVERDGKLVGIVTNRDL--RFESDMNK-KVSEIMTKD-NLIVAQV 166

Query: 301 LLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +T+  A ++L+++ I  L +VD   K  G++   D+ + 
Sbjct: 167 GITIKDAQEILQRYKIEKLPIVDKDFKLKGLITIKDIQKM 206



 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 56/117 (47%), Gaps = 13/117 (11%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRN 275
           S++M + D++ + ++G  + DA  IL   +   + +VD+  KLKG+IT  DI     + N
Sbjct: 153 SEIM-TKDNLIVAQVGITIKDAQEILQRYKIEKLPIVDKDFKLKGLITIKDIQKMRQYPN 211

Query: 276 FHKDLN-------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
             KD          + V D  I+  K ++E  +  + +     H+  VL  V + +K
Sbjct: 212 AAKDKKGRLLAGAAIGVGDEAIRRAKALVEAEVDVIVIDTAHGHHKKVLETVKELKK 268


>gi|151944198|gb|EDN62488.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 447

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 10/110 (9%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVED 287
           P   +G    +A ++  +  F    V  +G+   KL G++T  DI   F +D ++L V+D
Sbjct: 54  PTTTVG----EAKSMKEKYGFAGFPVTTDGKRNAKLVGVVTSRDI--QFVED-SSLLVQD 106

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM KNP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 107 VMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 156


>gi|170019156|ref|YP_001724110.1| putative DNA-binding transcriptional regulator [Escherichia coli
           ATCC 8739]
 gi|169754084|gb|ACA76783.1| transcriptional regulator, RpiR family [Escherichia coli ATCC 8739]
          Length = 282

 Score = 36.6 bits (83), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 63/150 (42%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    + + + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQVSSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|323442658|gb|EGB00285.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           O46]
          Length = 423

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 276 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 330

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 331 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 370


>gi|322382764|ref|ZP_08056608.1| N-acetylmuramic acid-6-phosphate etherase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
 gi|321153233|gb|EFX45679.1| N-acetylmuramic acid-6-phosphate etherase-like protein
           [Paenibacillus larvae subsp. larvae B-3650]
          Length = 281

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 25/141 (17%)

Query: 52  QFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFF 95
           Q   AVE I A K   GR++  G G SG IG   A     T             G  + F
Sbjct: 32  QIAKAVEAIIAAKRKGGRLIYIGAGTSGRIGLLDAVECPPTFGTNPEEVIGLIAGVENAF 91

Query: 96  VHAAEAS--HGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           + A E +  + +LG+       +T+ D+++ ++ SG +  +   L YA       +AI  
Sbjct: 92  IKAVEGAEDNKELGIQDLKDIKLTKKDIVVGIAASGRTPYVIGGLEYANSLGASTVAICC 151

Query: 147 ENKSVVACHADIVLTLPKEPE 167
              S     ADI + +   PE
Sbjct: 152 NKNSAAGKVADIAIEVVSGPE 172


>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 413

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 26/118 (22%), Positives = 54/118 (45%), Gaps = 20/118 (16%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------------FHKDL 280
           + I  L ++    + V D+   + G++T+GD+ ++                    + +  
Sbjct: 137 ETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHGGMPIRLGLLSTLPKEERSTWMEKS 196

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N  ++ ++M  +P+ I  D  ++ A+ L+ +  +  L VVD   K  GI+  +DLLR 
Sbjct: 197 NNRNLSEIMTPHPQTINADQKVSEALHLMVRKALKRLPVVDGNGKLCGILARIDLLRL 254


>gi|168034755|ref|XP_001769877.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678783|gb|EDQ65237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 524

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVMIKN 292
           G  + DA   ++ +R     +VD    L GIIT+ D+  R   + L      V  VM KN
Sbjct: 19  GSSVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEETLVSKVMTKN 78

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  ++ DTL   A+Q + Q     L VV+  +    +V  LD+ +
Sbjct: 79  PVFVMGDTLAVEALQKMVQGKFRHLPVVEKGE----VVALLDITK 119


>gi|154148845|ref|YP_001407266.1| KpsF/GutQ [Campylobacter hominis ATCC BAA-381]
 gi|153804854|gb|ABS51861.1| KpsF/GutQ [Campylobacter hominis ATCC BAA-381]
          Length = 84

 Score = 36.6 bits (83), Expect = 5.1,   Method: Composition-based stats.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 9/84 (10%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSVEDVMIKNPKVI 296
           AI  ++  + G V +VD+  +L  I+++GD+ R     NF  D+N  +V +   KNPKVI
Sbjct: 4   AINSITHGKLGNVLLVDKNGELVAILSDGDLRRALMDKNF--DINNKAV-NFASKNPKVI 60

Query: 297 LEDTLL-TVAMQLLRQHNISVLMV 319
               +L + A++++  + I +L+V
Sbjct: 61  DNPEMLASRALEIIENYKIQMLIV 84


>gi|119468952|ref|ZP_01611977.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium
           TW-7]
 gi|119447604|gb|EAW28871.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium
           TW-7]
          Length = 489

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + DA+ +  EK F    V D    L GI+T  D+   F   L    +  VM K  K++  
Sbjct: 106 IADAMDLAEEKGFSGFPVTDPENTLVGIVTSRDM--RFETKLEQ-PISTVMTKKEKLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E       + L+ +H I  ++VVDD  K  G++   D  +
Sbjct: 163 KEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203


>gi|298695716|gb|ADI98938.1| betaine-carnitine-choline ABC transporter [Staphylococcus aureus
           subsp. aureus ED133]
          Length = 408

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDSNNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 355


>gi|149927601|ref|ZP_01915854.1| transcriptional regulator, RpiR family protein [Limnobacter sp.
           MED105]
 gi|149823655|gb|EDM82883.1| transcriptional regulator, RpiR family protein [Limnobacter sp.
           MED105]
          Length = 284

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 9/130 (6%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRDDLIIVLSW 120
           KGR+V  G+G SG +           G  +   HA    H  +    M+ + D +I++S 
Sbjct: 132 KGRLVFYGVGNSGFVALDAEHKFFRMGCTA---HAYSDGHLQIMAASMLNKADCLIIISN 188

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG S +L      AR      IAIT+    +      + + +P +        +P  S +
Sbjct: 189 SGRSQDLLDATQIARAAGASTIAITASGSPLAQA---VQVHIPADHGEYYEQYSPMVSRL 245

Query: 181 MQLAIGDALA 190
           + L + D LA
Sbjct: 246 LHLCVVDVLA 255


>gi|59711720|ref|YP_204496.1| DNA-binding transcriptional regulator [Vibrio fischeri ES114]
 gi|197334756|ref|YP_002155912.1| transcriptional regulator, RpiR family protein [Vibrio fischeri
           MJ11]
 gi|59479821|gb|AAW85608.1| predicted DNA-binding transcriptional regulator [Vibrio fischeri
           ES114]
 gi|197316246|gb|ACH65693.1| transcriptional regulator, RpiR family protein [Vibrio fischeri
           MJ11]
          Length = 283

 Score = 36.6 bits (83), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 4/131 (3%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I GIG S      LA  L   G  +     +         +T+ D+ IV+S+SGS  
Sbjct: 136 RIQIVGIGGSALTAKDLAFKLLKIGMTALTEQDSHVQIATANTLTKQDVQIVISYSGSRK 195

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A      +IA+TS  KS +   A+  + T+  E +     ++  T+   Q  
Sbjct: 196 EILMAAQTAMDKGATVIALTSTKKSPLRKLANFCIDTIADERQFRSSSISSRTA---QNV 252

Query: 185 IGDALAIALLE 195
           I D L + LL+
Sbjct: 253 ITDLLFMTLLQ 263


>gi|306814375|ref|ZP_07448537.1| putative DNA-binding transcriptional regulator [Escherichia coli
           NC101]
 gi|305851769|gb|EFM52221.1| putative DNA-binding transcriptional regulator [Escherichia coli
           NC101]
          Length = 282

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNTEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|303256268|ref|ZP_07342284.1| CBS domain protein [Burkholderiales bacterium 1_1_47]
 gi|302860997|gb|EFL84072.1| CBS domain protein [Burkholderiales bacterium 1_1_47]
          Length = 151

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 6/110 (5%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDL 280
           +H+  +IPL   G  ++D    +     G + V+++ ++  G+IT+ DI        KD 
Sbjct: 13  VHTVATIPL---GTSVLDCSKAMRALHVGSLVVINDDRQPVGMITDRDICIEVVALEKDP 69

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             L VEDVM         D  +  A+  +R+  I  L VVD   K  GIV
Sbjct: 70  KGLKVEDVMSAPVCTASADETVVDALARMREQGIRRLPVVDKDDKLCGIV 119


>gi|238918816|ref|YP_002932330.1| transcriptional regulator, RpiR family protein [Edwardsiella
           ictaluri 93-146]
 gi|238868384|gb|ACR68095.1| transcriptional regulator, RpiR family protein [Edwardsiella
           ictaluri 93-146]
          Length = 225

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 58/115 (50%), Gaps = 9/115 (7%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H ++++  ++     ++AEK  +++L+S+L      Q   A+  +   + R+VITG+G S
Sbjct: 106 HGILRHDPLKVVGEKLMAEK--IAALQSTLTINHEEQLQRALRMLLGAR-RIVITGLGAS 162

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLG---MITRDDLIIVLSWSGSSDEL 127
           G +    A+ L   G  ++   A   +H  +     +   DL++ +S+SG   E+
Sbjct: 163 GLVARDFANKLMQIGLAAY---AESDTHMQIACAQAMQPQDLLMAISYSGERKEV 214


>gi|238761988|ref|ZP_04622961.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
 gi|238699716|gb|EEP92460.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
          Length = 246

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 27/104 (25%), Positives = 54/104 (51%), Gaps = 8/104 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R++  GIG SG +G   A   ++ G  S ++   +  +     + +D + I+ S SG ++
Sbjct: 113 RIIFVGIGTSGALGKYSARFFSNIGKYSTYID--DPYYPINSDMYQDAIAIIFSVSGETE 170

Query: 126 ELKAILYYARRFSI---PLIAITSENKSVVACHADIVLTLPKEP 166
           E+  I   A +FS+    +I++T+ + S +A  AD+ ++    P
Sbjct: 171 EIIRI---ANQFSLQNCKIISLTNSDNSTLAKMADLNISYHMPP 211


>gi|258651427|ref|YP_003200583.1| glucosamine--fructose-6-phosphate aminotransferase [Nakamurella
           multipartita DSM 44233]
 gi|258554652|gb|ACV77594.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Nakamurella multipartita DSM 44233]
          Length = 622

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 48/96 (50%), Gaps = 3/96 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++ RD L++ +S SG + +    L +ARR    ++A+ + N S +   +D V+ +   PE
Sbjct: 346 VLNRDTLVVAVSQSGETADTLEALRHARRQKARVLAVCNTNGSQIPRESDAVVYIHAGPE 405

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
               G+A T + +  L     + +AL ++R     D
Sbjct: 406 I---GVASTKAFLGMLTANYLVGLALAQARGTKYRD 438


>gi|13476039|ref|NP_107609.1| N-acetylmuramic acid-6-phosphate etherase [Mesorhizobium loti
           MAFF303099]
 gi|81776897|sp|Q986Q8|MURQ_RHILO RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|14026799|dbj|BAB53395.1| mll7248 [Mesorhizobium loti MAFF303099]
          Length = 307

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 31/124 (25%), Positives = 52/124 (41%), Gaps = 22/124 (17%)

Query: 66  RVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM---- 108
           R++  G G SG +G   AS    T             G P   V + E +  D  M    
Sbjct: 71  RLIYVGAGTSGRLGVLDASECPPTFGVPEDMVIGLIAGGPDALVRSTEGAEDDPKMGAQA 130

Query: 109 -----ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
                +T DD+++ ++ SG +  +   L YA++     +A++    S +A  ADI ++  
Sbjct: 131 LQEIGLTPDDVVMGIAVSGRTPYVIGGLNYAKQVGATTVALSCNPASTIAGIADIAISPV 190

Query: 164 KEPE 167
             PE
Sbjct: 191 VGPE 194


>gi|313884625|ref|ZP_07818383.1| transcriptional repressor CcpN [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620135|gb|EFR31566.1| transcriptional repressor CcpN [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 205

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 3/63 (4%)

Query: 276 FHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F   LN ++V ++MI  P +I+ +DT + +A+  L  H+   L VVDD ++ +G+V   D
Sbjct: 68  FLDKLNHMTVAEIMI--PAIIIKQDTSVQMAISHLFLHDAGSLYVVDDNEELVGLVSRKD 125

Query: 335 LLR 337
           LLR
Sbjct: 126 LLR 128


>gi|283457617|ref|YP_003362201.1| transcriptional regulator [Rothia mucilaginosa DY-18]
 gi|283133616|dbj|BAI64381.1| transcriptional regulator [Rothia mucilaginosa DY-18]
          Length = 272

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 39/75 (52%)

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           +  +T+DD++I++S+SG ++ ++  +       IP+IA+T+   + ++ HA+  L     
Sbjct: 157 MNNMTQDDVVIIVSFSGQTENMREHIKMLALRRIPMIAVTAIGVNYMSSHAEYSLHYQTT 216

Query: 166 PESCPHGLAPTTSAI 180
           P        P  S +
Sbjct: 217 PTQISTQRKPYYSFV 231


>gi|225181929|ref|ZP_03735363.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225167369|gb|EEG76186.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 369

 Score = 36.6 bits (83), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 35/55 (63%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T+S+E++MI +P  +     +T A++++R+  +  LMVVD+    IGI+   D+
Sbjct: 247 DTVSLEEIMISDPVTVNPKRGVTEALRIMRKRRVDSLMVVDNKDLLIGILTAKDV 301


>gi|228999391|ref|ZP_04158970.1| hypothetical protein bmyco0003_39460 [Bacillus mycoides Rock3-17]
 gi|229006947|ref|ZP_04164576.1| hypothetical protein bmyco0002_38470 [Bacillus mycoides Rock1-4]
 gi|228754265|gb|EEM03681.1| hypothetical protein bmyco0002_38470 [Bacillus mycoides Rock1-4]
 gi|228760336|gb|EEM09303.1| hypothetical protein bmyco0003_39460 [Bacillus mycoides Rock3-17]
          Length = 415

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            E   G   +VDE +K+ GI+T  D+     K+     +E VM K P  +     +  A 
Sbjct: 196 KETMHGRYPIVDENKKVLGIVTSKDMI-GIAKET---PIEKVMTKQPITVNGKMSVAAAA 251

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    I +L VVD+  +  GI+   D+L+
Sbjct: 252 RMMVWEGIELLPVVDESNRLQGIISRQDVLQ 282


>gi|217076752|ref|YP_002334468.1| inosine-5-monophosphate dehydrogenase-related protein [Thermosipho
           africanus TCF52B]
 gi|217036605|gb|ACJ75127.1| inosine-5-monophosphate dehydrogenase-related protein [Thermosipho
           africanus TCF52B]
          Length = 306

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 2/94 (2%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLT 303
           IL  KR   V VV+  +++ GII+  DI +    + LN L VE+ M KN  V+  +  L 
Sbjct: 39  ILRLKRISGVPVVNYKKRVVGIISIEDIIKCLEANSLNAL-VEEKMTKNVVVVNVNDTLR 97

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             M+L  ++      VVDD  + +GIV   D+L+
Sbjct: 98  DVMELFEKYGYGRFPVVDDEHRLVGIVTKNDILK 131


>gi|151943694|gb|EDN62004.1| protein kinase activator [Saccharomyces cerevisiae YJM789]
          Length = 322

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 61/136 (44%), Gaps = 17/136 (12%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G L +   D M S       ++  P+ID I +L + R   V ++DE   L  +    D+
Sbjct: 188 IGDLNIITQDNMKS------CQMTTPVIDVIQMLIQGRVSSVPIIDENGYLINVYEAYDV 241

Query: 273 FR----NFHKDLNTLSVEDVMIKNPK------VILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   + DL +LSV + +++            ++  L+  M  +R+  +    VVDD
Sbjct: 242 LGLIKGGIYNDL-SLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDD 300

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G++   D+L++
Sbjct: 301 VGRLVGVLTLSDILKY 316


>gi|151220471|ref|YP_001331293.1| hypothetical protein NWMN_0259 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|150373271|dbj|BAF66531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 266

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|89894404|ref|YP_517891.1| hypothetical protein DSY1658 [Desulfitobacterium hafniense Y51]
 gi|89333852|dbj|BAE83447.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 310

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 16/60 (26%), Positives = 33/60 (55%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++ + + + D+M  NP +IL      VA+  +RQ     L+V D+  K +GI+  ++ +
Sbjct: 243 YQNPDYIPITDIMRDNPAIILPSRTPVVAISFMRQRKTDTLIVCDEKGKLLGIIPVMNCM 302


>gi|311104464|ref|YP_003977317.1| RpiR family transcriptional regulator [Achromobacter xylosoxidans
           A8]
 gi|310759153|gb|ADP14602.1| helix-turn-helix domain, RpiR family protein 2 [Achromobacter
           xylosoxidans A8]
          Length = 277

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 46/143 (32%), Positives = 62/143 (43%), Gaps = 15/143 (10%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSK-----LASTLASTGTPSFFVHAAEASHGDLG 107
              AVE I+  + RV I GIG S  I        L   L +T      V A  AS     
Sbjct: 116 LRAAVELIRRAR-RVEIYGIGSSAVIAHDAHYRMLRIGLHATAVTDSHVQAISAS----- 169

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEP 166
           +   D  ++ +S SGS+ E       A+      I IT+  KS +  HAD+VL T+ +E 
Sbjct: 170 LTGPDVAVLTISHSGSTHETVLATRLAKEAGARTICITNFGKSPIQEHADVVLHTMSRET 229

Query: 167 ESCPHGLAPTTSAIMQLAIGDAL 189
                 +   TS + QLAI D L
Sbjct: 230 RFRTEAM---TSRLAQLAIIDTL 249


>gi|154497154|ref|ZP_02035850.1| hypothetical protein BACCAP_01447 [Bacteroides capillosus ATCC
           29799]
 gi|150273553|gb|EDN00681.1| hypothetical protein BACCAP_01447 [Bacteroides capillosus ATCC
           29799]
          Length = 298

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 41/87 (47%), Gaps = 2/87 (2%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           TRDDL IV+S+SG + E+   +   R    P+IAIT    S VA  AD  L       + 
Sbjct: 178 TRDDLGIVISYSGETVEMVECMKAMRENHTPIIAITRCVSSPVADLADYKLYTTANESTF 237

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLES 196
             G    +S I QL + D L  A   S
Sbjct: 238 RSG--AMSSRISQLNLIDILYTAFANS 262


>gi|21282023|ref|NP_645111.1| hypothetical protein MW0294 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485198|ref|YP_042419.1| hypothetical protein SAS0294 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297209170|ref|ZP_06925569.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911171|ref|ZP_07128620.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|21203459|dbj|BAB94159.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243641|emb|CAG42065.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296886103|gb|EFH25037.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300887350|gb|EFK82546.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 266

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|115525270|ref|YP_782181.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisA53]
 gi|115519217|gb|ABJ07201.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisA53]
          Length = 497

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++S+  F  + VV    K     L GI+T  D+   F  D      E +  +N 
Sbjct: 110 LGDALALMSDHGFSGIPVVTGASKGVPGKLVGILTNRDV--RFATDPKQKISELMTHENL 167

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +      A ++L QH I  L+VVDD  + +G++   D+
Sbjct: 168 VTVRQGVSQDEAKKMLHQHRIEKLLVVDDQYRCVGLITVKDM 209


>gi|15923307|ref|NP_370841.1| hypothetical protein SAV0317 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926019|ref|NP_373552.1| hypothetical protein SA0306 [Staphylococcus aureus subsp. aureus
           N315]
 gi|49482549|ref|YP_039773.1| hypothetical protein SAR0314 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57651241|ref|YP_185206.1| hypothetical protein SACOL0314 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750017|ref|YP_415758.1| hypothetical protein SAB0254c [Staphylococcus aureus RF122]
 gi|87160496|ref|YP_493031.1| hypothetical protein SAUSA300_0317 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194098|ref|YP_498887.1| hypothetical protein SAOUHSC_00297 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148266740|ref|YP_001245683.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392781|ref|YP_001315456.1| hypothetical protein SaurJH1_0307 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978645|ref|YP_001440904.1| hypothetical protein SAHV_0314 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508587|ref|YP_001574246.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142224|ref|ZP_03566717.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253316582|ref|ZP_04839795.1| hypothetical protein SauraC_10635 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253730680|ref|ZP_04864845.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|255005111|ref|ZP_05143712.2| hypothetical protein SauraM_01550 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257424461|ref|ZP_05600890.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427130|ref|ZP_05603532.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429766|ref|ZP_05606153.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432412|ref|ZP_05608775.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435372|ref|ZP_05611423.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257795058|ref|ZP_05644037.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|258413563|ref|ZP_05681838.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|258421313|ref|ZP_05684240.1| sugar isomerase [Staphylococcus aureus A9719]
 gi|258439061|ref|ZP_05690152.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|258444297|ref|ZP_05692631.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|258447176|ref|ZP_05695326.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|258448634|ref|ZP_05696747.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258453090|ref|ZP_05701083.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258455871|ref|ZP_05703826.1| sugar isomerase [Staphylococcus aureus A5937]
 gi|262048884|ref|ZP_06021764.1| hypothetical protein SAD30_0730 [Staphylococcus aureus D30]
 gi|262052994|ref|ZP_06025172.1| hypothetical protein SA930_0023 [Staphylococcus aureus 930918-3]
 gi|269201964|ref|YP_003281233.1| hypothetical protein SAAV_0284 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893475|ref|ZP_06301708.1| hypothetical protein SGAG_00828 [Staphylococcus aureus A8117]
 gi|282902900|ref|ZP_06310793.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907300|ref|ZP_06315148.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907643|ref|ZP_06315485.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282913173|ref|ZP_06320965.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M899]
 gi|282915639|ref|ZP_06323410.1| hypothetical protein SATG_02360 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282921612|ref|ZP_06329330.1| hypothetical protein SASG_01793 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282922288|ref|ZP_06329979.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282922800|ref|ZP_06330490.1| hypothetical protein SARG_00452 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282926427|ref|ZP_06334059.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|283768048|ref|ZP_06340963.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283959751|ref|ZP_06377192.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284023326|ref|ZP_06377724.1| hypothetical protein Saura13_01934 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293498222|ref|ZP_06666076.1| hypothetical protein SCAG_00795 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293511816|ref|ZP_06670510.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|293550426|ref|ZP_06673098.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294849964|ref|ZP_06790702.1| hypothetical protein SKAG_02053 [Staphylococcus aureus A9754]
 gi|295405587|ref|ZP_06815397.1| hypothetical protein SMAG_00741 [Staphylococcus aureus A8819]
 gi|295426849|ref|ZP_06819488.1| hypothetical protein SIAG_01007 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296275063|ref|ZP_06857570.1| hypothetical protein SauraMR_01925 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245494|ref|ZP_06929362.1| hypothetical protein SLAG_01590 [Staphylococcus aureus A8796]
 gi|297588939|ref|ZP_06947580.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MN8]
 gi|304380281|ref|ZP_07363001.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13700232|dbj|BAB41530.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246085|dbj|BAB56479.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|49240678|emb|CAG39338.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|57285427|gb|AAW37521.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82655548|emb|CAI79942.1| probable transcription regulator [Staphylococcus aureus RF122]
 gi|87126470|gb|ABD20984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201656|gb|ABD29466.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147739809|gb|ABQ48107.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945233|gb|ABR51169.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|156720780|dbj|BAF77197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367396|gb|ABX28367.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253725524|gb|EES94253.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257273479|gb|EEV05581.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276761|gb|EEV08212.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257280247|gb|EEV10834.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283291|gb|EEV13423.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285968|gb|EEV16084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257789030|gb|EEV27370.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|257839810|gb|EEV64279.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|257842737|gb|EEV67159.1| sugar isomerase [Staphylococcus aureus A9719]
 gi|257847937|gb|EEV71933.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|257850556|gb|EEV74504.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|257854189|gb|EEV77142.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|257858265|gb|EEV81153.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257859300|gb|EEV82155.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257862083|gb|EEV84856.1| sugar isomerase [Staphylococcus aureus A5937]
 gi|259159120|gb|EEW44186.1| hypothetical protein SA930_0023 [Staphylococcus aureus 930918-3]
 gi|259162956|gb|EEW47518.1| hypothetical protein SAD30_0730 [Staphylococcus aureus D30]
 gi|262074254|gb|ACY10227.1| hypothetical protein SAAV_0284 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269939837|emb|CBI48206.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282315021|gb|EFB45407.1| hypothetical protein SARG_00452 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316027|gb|EFB46411.1| hypothetical protein SASG_01793 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282320455|gb|EFB50794.1| hypothetical protein SATG_02360 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282323273|gb|EFB53592.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M899]
 gi|282328548|gb|EFB58819.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330199|gb|EFB59720.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591756|gb|EFB96827.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282593414|gb|EFB98409.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282597359|gb|EFC02318.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus C160]
 gi|282764161|gb|EFC04288.1| hypothetical protein SGAG_00828 [Staphylococcus aureus A8117]
 gi|283461927|gb|EFC09011.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283789343|gb|EFC28170.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285816040|gb|ADC36527.1| Sialic acid utilization regulator, RpiR family [Staphylococcus
           aureus 04-02981]
 gi|290919473|gb|EFD96549.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291097153|gb|EFE27411.1| hypothetical protein SCAG_00795 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291465774|gb|EFF08306.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823098|gb|EFG39529.1| hypothetical protein SKAG_02053 [Staphylococcus aureus A9754]
 gi|294969662|gb|EFG45681.1| hypothetical protein SMAG_00741 [Staphylococcus aureus A8819]
 gi|295129301|gb|EFG58928.1| hypothetical protein SIAG_01007 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297177480|gb|EFH36731.1| hypothetical protein SLAG_01590 [Staphylococcus aureus A8796]
 gi|297577450|gb|EFH96163.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298693585|gb|ADI96807.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302332056|gb|ADL22249.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302750188|gb|ADL64365.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304341262|gb|EFM07181.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312828838|emb|CBX33680.1| helix-turn-helix domain, rpiR family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129960|gb|EFT85949.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315194772|gb|EFU25161.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|315197995|gb|EFU28327.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320139376|gb|EFW31255.1| SIS domain protein [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142927|gb|EFW34723.1| SIS domain protein [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323440306|gb|EGA98020.1| hypothetical protein SAO11_1043 [Staphylococcus aureus O11]
 gi|329313010|gb|AEB87423.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724299|gb|EGG60812.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21189]
 gi|329725796|gb|EGG62275.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21172]
 gi|329732558|gb|EGG68908.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21193]
          Length = 266

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|294084892|ref|YP_003551652.1| CBS domain-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664467|gb|ADE39568.1| CBS domain containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 140

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 61/117 (52%), Gaps = 14/117 (11%)

Query: 232 LVKIGCPLIDA-------ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNT 282
           L++ GC  ++A       + +L +   G V V D+  ++ GI++E DI R+    K L  
Sbjct: 8   LIERGCVTVNADSALETVVDMLVKWGIGTVVVADQNMQVLGILSERDIIRHLSKGKTLEG 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVA--MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +D+M    KVI  D  +T +  M L+ ++ I  + +  D +K +GIV   D+++
Sbjct: 68  MKAQDLM--TAKVITVDQQVTSSELMHLMTKNRIRHVPITKD-KKLVGIVSIGDVVK 121


>gi|148643674|ref|YP_001274187.1| transcriptional regulator [Methanobrevibacter smithii ATCC 35061]
 gi|261350584|ref|ZP_05976001.1| CBS domain protein [Methanobrevibacter smithii DSM 2374]
 gi|148552691|gb|ABQ87819.1| predicted transcriptional regulator [Methanobrevibacter smithii
           ATCC 35061]
 gi|288861367|gb|EFC93665.1| CBS domain protein [Methanobrevibacter smithii DSM 2374]
          Length = 300

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 25/105 (23%), Positives = 53/105 (50%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K+   L +A  + +        V+++G+ + G+ T  D+ R    +   L V D+M  N
Sbjct: 184 LKVSSTLKEAAEVFAFNDIKGAPVMEDGKAV-GVFTVTDLVRAIANNKEDLLVGDLMTTN 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++ ED  +  A++++ +  IS +++ D+    +GIV   DL+ 
Sbjct: 243 IVIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDLIN 287


>gi|150401183|ref|YP_001324949.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013886|gb|ABR56337.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 302

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 61/121 (50%), Gaps = 2/121 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DE-GQKLKGIITEGDIFRN 275
           +    ++H+   +  +K    + +A  +L  K    V +V DE  Q L+GIIT  DI ++
Sbjct: 171 IPVESILHNKKEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAKS 230

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L   +V+ +M+K+   I     +  A++ + +H +  L+ V++  K  GI+   D+
Sbjct: 231 LAEGLENGTVDKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDI 290

Query: 336 L 336
           +
Sbjct: 291 M 291


>gi|58617508|ref|YP_196707.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Gardel]
 gi|58417120|emb|CAI28233.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Gardel]
          Length = 485

 Score = 36.6 bits (83), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           A++I+ +  +  + VV E   G++L GI+T  D+    +KD     V D+M K+  + + 
Sbjct: 105 ALSIMKKYSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVADIMTKDHLITVP 161

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +    A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 162 EGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|315303350|ref|ZP_07873971.1| conserved protein YtoI [Listeria ivanovii FSL F6-596]
 gi|313628281|gb|EFR96793.1| conserved protein YtoI [Listeria ivanovii FSL F6-596]
          Length = 242

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 32  VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 87

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 88  VIPVVKDDLSLIGIVSRQDILK 109


>gi|304316260|ref|YP_003851405.1| signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302777762|gb|ADL68321.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 441

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 44/82 (53%), Gaps = 5/82 (6%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD+   L GI+T  ++ +    D     + D+M KNP  + E T +  A  L+   NI 
Sbjct: 229 VVDDSGALVGIVTSREVAKADEGD----KIGDIMSKNPIYVTETTTVAFAAHLMIWWNIE 284

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           VL V ++ ++ +GI+   D+++
Sbjct: 285 VLPVTNN-KELVGIISREDVIK 305


>gi|219559585|ref|ZP_03538661.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T17]
          Length = 242

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 4/89 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL-LTVAMQL 308
           R   + VVD+   L GIIT  D+   F  D  +  V +VM K P +  ++ +  + A+ L
Sbjct: 149 RISGLPVVDDDGALVGIITNRDM--RFEVD-QSKQVAEVMTKAPLITAQEGVSASAALGL 205

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR++ I  L VVD   +  G++   D ++
Sbjct: 206 LRRNKIEKLPVVDGRGRLTGLITVKDFVK 234


>gi|57239476|ref|YP_180612.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161555|emb|CAH58482.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 485

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/101 (26%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           A++I+ +  +  + VV E   G++L GI+T  D+    +KD     V D+M K+  + + 
Sbjct: 105 ALSIMKKYSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVADIMTKDHLITVP 161

Query: 299 DTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +    A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 162 EGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|148255020|ref|YP_001239605.1| inosine 5'-monophosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146407193|gb|ABQ35699.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 495

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++ +  F  + VV  G K     L GI+T  D+   F  D      E +  +N 
Sbjct: 108 LADALALMKDYGFSGIPVVTGGGKGIPGKLVGILTNRDV--RFATDPRQKISELMTHENL 165

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVDD  + +G++   D+
Sbjct: 166 VTVREGVGQDEAKKILHKHRIEKLLVVDDQYRCVGLITVKDM 207


>gi|260767722|ref|ZP_05876657.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|260617231|gb|EEX42415.1| Signal transduction protein [Vibrio furnissii CIP 102972]
          Length = 620

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 232 LVKIGCPLIDAITILS-EKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDV 288
           +V    P+  A   +S E    C A+VD+ Q+L G++T+ D+ +    H       +  +
Sbjct: 165 MVTPDTPIQQAADRMSREPNSSCAAIVDQQQRLIGLVTDKDMTKRVIAHGLDVQPPIATI 224

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M      +  D L+  A +++ QH+I  + +VDD     GI+
Sbjct: 225 MTHQLHTVSVDDLVMKASEIMIQHHIQNVPIVDDNFTLQGII 266


>gi|227551685|ref|ZP_03981734.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium TX1330]
 gi|227179126|gb|EEI60098.1| glutamine--fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium TX1330]
          Length = 604

 Score = 36.6 bits (83), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 294 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSQKPFFIFLSQSGETA 353

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 354 DSRQVLVKINRLDYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 410

Query: 186 GDALAIALLESRNF 199
              LA A+ + +  
Sbjct: 411 LTLLAKAIGDKKEL 424


>gi|315651915|ref|ZP_07904917.1| RpiR family transcriptional regulator [Eubacterium saburreum DSM
           3986]
 gi|315485744|gb|EFU76124.1| RpiR family transcriptional regulator [Eubacterium saburreum DSM
           3986]
          Length = 280

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 33/143 (23%), Positives = 62/143 (43%), Gaps = 7/143 (4%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V + G+G SG +   +   L+  G    F +       +L  IT++D  + +S+SG++ 
Sbjct: 131 KVYLFGVGASGIVCYDINYKLSRIGKDVVFNNDIHLQLVNLNFITKEDSCVCVSYSGNTK 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E   +   A++     + I    K+ ++   DI L +P +      G   + +  + L  
Sbjct: 191 ETVLVAEIAKKAGAKTVGICCYGKNELSKICDITLRVPHDERELRLGAISSRNTTLTLLD 250

Query: 186 GDALAIALLESRNFSENDFYVLH 208
              LAI     R++ E    VLH
Sbjct: 251 TIYLAIT---HRHYPE----VLH 266


>gi|167461263|ref|ZP_02326352.1| glucokinase regulatory-like protein [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 295

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 58/141 (41%), Gaps = 25/141 (17%)

Query: 52  QFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFF 95
           Q   AVE I A K   GR++  G G SG IG   A     T             G  + F
Sbjct: 46  QIAKAVEAIIAAKRKGGRLIYIGAGTSGRIGLLDAVECPPTFGTNPEEVIGLIAGVENAF 105

Query: 96  VHAAEAS--HGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           + A E +  + +LG+       +T+ D+++ ++ SG +  +   L YA       +AI  
Sbjct: 106 IKAVEGAEDNKELGIQDLKDIKLTKKDIVVGIAASGRTPYVIGGLEYANSLGASTVAICC 165

Query: 147 ENKSVVACHADIVLTLPKEPE 167
              S     ADI + +   PE
Sbjct: 166 NKNSAAGKVADIAIEVVSGPE 186


>gi|298292658|ref|YP_003694597.1| hypothetical protein Snov_2689 [Starkeya novella DSM 506]
 gi|296929169|gb|ADH89978.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
          Length = 152

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 8/114 (7%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDIFRNFHKD---LNT 282
           +P +++   +  A T+L+ +R G V V D    EG  + GI +E D+ R   +       
Sbjct: 14  VPTIRMSETVEMAATLLNRERIGAVVVKDACGSEGDTVVGIFSERDVVRAVAERGALALR 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+V D+M +N      D  +     L+ QH++  L V++D Q  +G++   D+L
Sbjct: 74  LTVGDLMSRNMISCTMDDSVDHVRALMDQHHVRHLPVLEDHQ-LVGVLSIRDVL 126


>gi|45358471|ref|NP_988028.1| CBS domain-containing protein [Methanococcus maripaludis S2]
 gi|44921229|emb|CAF30464.1| CBS domain [Methanococcus maripaludis S2]
          Length = 126

 Score = 36.6 bits (83), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 58/104 (55%), Gaps = 7/104 (6%)

Query: 239 LIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNP 293
           L +A  +++ K    V V +DE   + G+IT  D+   F +    +L  ++++DV  K  
Sbjct: 20  LFEAFKVMNHKGVKRVFVRIDEN--IDGVITYRDLAHLFFEKGVFELMDVTLKDVSTKEI 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E+  +T A Q++   ++S L+V+D+ + A+G++   D+LR
Sbjct: 78  LTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDILR 121


>gi|308068340|ref|YP_003869945.1| transcriptional regulator [Paenibacillus polymyxa E681]
 gi|305857619|gb|ADM69407.1| Predicted transcriptional regulator containing CBS domains
           [Paenibacillus polymyxa E681]
          Length = 444

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 12/86 (13%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM----IKNPKVILEDTLLTVAMQLLR 310
           A+VDE  +L GI++         KD+  L  E  M    I+NP  +   T L  A Q++ 
Sbjct: 232 AIVDEWNRLIGIVS--------RKDVEGLQPEHTMDKCLIRNPITVTYQTSLASAAQMMA 283

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  L VVD  +K +G V   ++L
Sbjct: 284 WEGVDYLPVVDRNRKLLGSVTRREVL 309


>gi|196250595|ref|ZP_03149285.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Geobacillus sp. G11MC16]
 gi|196209944|gb|EDY04713.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Geobacillus sp. G11MC16]
          Length = 600

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 44/102 (43%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      + S       VH A     ++ +++   L I +S SG + 
Sbjct: 292 RLYIVACGTSYHAGLVGKQLIESWAKIPVEVHIASEFSYNMPLLSEKPLFIFISQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           + +A+L   R+     I IT+   S ++  AD  L L   PE
Sbjct: 352 DSRAVLVQTRKLGHKAITITNVPGSTLSREADYTLLLHAGPE 393


>gi|302385038|ref|YP_003820860.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
 gi|302195666|gb|ADL03237.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
          Length = 278

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 9/113 (7%)

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           +P +F+     +H +L    ++D+II +S SGSS ++   +  AR   + ++AIT   +S
Sbjct: 162 SPEYFL-----NHVNLA--DKEDIIIAISQSGSSRQIIQGMELAREKGLKMMAITGYRQS 214

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            V+  AD VL      ES  +      + + + A+ DAL   L   +   E D
Sbjct: 215 PVSELADYVLISNGRKESFDY--YKNYAHLKETALIDALLELLTNWKKIEETD 265


>gi|283471669|emb|CAQ50880.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus subsp. aureus ST398]
          Length = 408

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     S+ D M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDRDNHLLGFLDIEDINQGIRGHK-----SLRDTMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDKQRLVGLI 355


>gi|290579979|ref|YP_003484371.1| putative acetoin utilization protein [Streptococcus mutans NN2025]
 gi|254996878|dbj|BAH87479.1| putative acetoin utilization protein [Streptococcus mutans NN2025]
          Length = 219

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVEDVM 289
           A  I+ EK    + V+ E   L G++TEG I                +  LN     DVM
Sbjct: 23  ATDIMREKNLRRLPVI-ENDVLVGLLTEGTIADANPSKATSLSIYEMNYLLNKTKARDVM 81

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           IK+   + +D  L  A+ ++ +H I VL VVD  Q + GI+   D+ R
Sbjct: 82  IKDVITVSKDARLEDAIYIMMKHKIGVLPVVDGNQMS-GIITDKDVFR 128


>gi|219851432|ref|YP_002465864.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219545691|gb|ACL16141.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 272

 Score = 36.6 bits (83), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 8/97 (8%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILED 299
           D + IL       V V+ EG +L GIIT  D+ R   +  L  L   D +   P   + D
Sbjct: 16  DVLKILKRTGISGVPVIKEG-RLIGIITRKDLLRKPDETQLGLLMTPDPITIGPGATIRD 74

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                A +LL +HNI  L VV+D    IG++   DL+
Sbjct: 75  -----AARLLVKHNIRRLPVVED-DSLIGLISVSDLI 105


>gi|283469557|emb|CAQ48768.1| SIS domain protein [Staphylococcus aureus subsp. aureus ST398]
          Length = 266

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNTDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|262404940|ref|ZP_06081492.1| transcriptional regulator RpiR family [Vibrio sp. RC586]
 gi|262348779|gb|EEY97920.1| transcriptional regulator RpiR family [Vibrio sp. RC586]
          Length = 282

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLRELADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|260881098|ref|ZP_05403614.2| inosine-5'-monophosphate dehydrogenase [Mitsuokella multacida DSM
           20544]
 gi|260849513|gb|EEX69520.1| inosine-5'-monophosphate dehydrogenase [Mitsuokella multacida DSM
           20544]
          Length = 464

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 69/159 (43%), Gaps = 13/159 (8%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG--DSIPL 232
           P TSAIMQ    D +AIAL +    S   F       +     V       SG   S   
Sbjct: 16  PMTSAIMQAVSNDKMAIALAKEGGVS---FIYGSQSIEAEAAMVSRVKNYKSGFVSSDSN 72

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +K    L + + +L +     +AV  +G    KL GI+T  D +R     L+T   E  M
Sbjct: 73  IKPTTTLGEILDLLQKTGHSTMAVTKDGTPTGKLLGIVTSRD-YRISRMSLDT-KAETFM 130

Query: 290 IKNPKVILED---TLLTVAMQLLRQHNISVLMVVDDCQK 325
               K++  D   T LT A  L+ +H +++L +VD  Q+
Sbjct: 131 TPFEKLVYADADTTSLTKANDLIWEHKLNMLPLVDKNQR 169


>gi|116753635|ref|YP_842753.1| CBS domain-containing protein [Methanosaeta thermophila PT]
 gi|116665086|gb|ABK14113.1| CBS domain containing protein [Methanosaeta thermophila PT]
          Length = 370

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 3/93 (3%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +  EK  G   +V++  +L GI+T  D+ R       T  V DVM +N  VI  D   T 
Sbjct: 271 MFYEKHRGYPVMVND--ELVGIVTITDLQRVPEHLRETTRVGDVMTRNIYVIGPDDEATA 328

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A++++    I  L V++D  + +GI+   DLLR
Sbjct: 329 AIKIMGDKKIRRLPVIED-GRLVGIISREDLLR 360


>gi|14591373|ref|NP_143451.1| hypothetical protein PH1595 [Pyrococcus horikoshii OT3]
 gi|3258024|dbj|BAA30707.1| 172aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 172

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 60/134 (44%), Gaps = 23/134 (17%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLS 284
            +P+++    +I+A+ IL  +    V    +  KL G+I   D+F          L ++S
Sbjct: 27  QMPILEENSSIINALKILRTRHHVWVVNDRKEMKLVGVIRYFDVFYILMPPKRARLGSIS 86

Query: 285 ------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---- 328
                       V ++M +N   I ED  +  A++ +R++ + +L VVD+  +  G    
Sbjct: 87  PLFKSIFGGAEKVGEIMERNVLTIEEDATILDALEKMRRYKVGILAVVDEEGRLKGEVSL 146

Query: 329 ---IVHFLDLLRFG 339
              I  FL LLR G
Sbjct: 147 RLLITEFLRLLRVG 160


>gi|295399513|ref|ZP_06809495.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109929|ref|YP_003988245.1| GntR family transcriptional regulator [Geobacillus sp. Y4.1MC1]
 gi|294978979|gb|EFG54575.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215030|gb|ADP73634.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y4.1MC1]
          Length = 437

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 230 IPLVKIGC-----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           IPL K        P+     +  E +     VVD+  K++GI T  D+  +F + L    
Sbjct: 196 IPLEKTAYLYTTDPVERWYELNRETKHSRFPVVDQQLKVQGIATAKDVL-DFDRQL---P 251

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E  M K+P  +   T +  A  ++    I +L VVD+  +  GI+   D+L+
Sbjct: 252 IEKAMTKHPITVKGKTSVASASHIMVWEGIELLPVVDEYNRLQGIISRQDVLK 304


>gi|229076113|ref|ZP_04209081.1| hypothetical protein bcere0024_43100 [Bacillus cereus Rock4-18]
 gi|229099071|ref|ZP_04230005.1| hypothetical protein bcere0020_42940 [Bacillus cereus Rock3-29]
 gi|229105239|ref|ZP_04235888.1| hypothetical protein bcere0019_43730 [Bacillus cereus Rock3-28]
 gi|229118101|ref|ZP_04247460.1| hypothetical protein bcere0017_43700 [Bacillus cereus Rock1-3]
 gi|228665324|gb|EEL20807.1| hypothetical protein bcere0017_43700 [Bacillus cereus Rock1-3]
 gi|228678165|gb|EEL32393.1| hypothetical protein bcere0019_43730 [Bacillus cereus Rock3-28]
 gi|228684299|gb|EEL38243.1| hypothetical protein bcere0020_42940 [Bacillus cereus Rock3-29]
 gi|228706976|gb|EEL59181.1| hypothetical protein bcere0024_43100 [Bacillus cereus Rock4-18]
          Length = 437

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            E   G   +VDE +K+ GI+T  D+     KD     ++ VM K+P  +     +  A 
Sbjct: 218 EETMHGRYPIVDENKKVLGIVTSKDMI-GVAKDT---PIDKVMTKHPITVNGKMSVAAAA 273

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    I +L VV+D  K  GI+   D+L+
Sbjct: 274 RMMVWEGIELLPVVEDGNKLQGIISRQDVLQ 304


>gi|15895958|ref|NP_349307.1| inosine 5'-monophosphate dehydrogenase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025734|gb|AAK80647.1|AE007768_1 IMP dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|325510110|gb|ADZ21746.1| inositol-5-monophosphate dehydrogenase [Clostridium acetobutylicum
           EA 2018]
          Length = 485

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           +A+ ++   R   V + D   KL GIIT  DI    ++ K +  L   + ++  P    +
Sbjct: 108 EALDLMKRYRISGVPITDNAGKLIGIITNRDIVFETDYSKKIEELMTTENLVTAP----Q 163

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            T +  A  LL++H I  L +VD+     G++   D+ + 
Sbjct: 164 GTTIDEAKNLLKKHKIEKLPLVDENFVLKGLITIKDIEKI 203


>gi|110644158|ref|YP_671888.1| hypothetical protein ECP_4027 [Escherichia coli 536]
 gi|191173935|ref|ZP_03035454.1| 3-hexulose-6-phosphate isomerase [Escherichia coli F11]
 gi|227888577|ref|ZP_04006382.1| possible 3-hexulose-6-phosphate isomerase [Escherichia coli 83972]
 gi|300979437|ref|ZP_07174566.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 200-1]
 gi|300985646|ref|ZP_07177533.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 45-1]
 gi|301047281|ref|ZP_07194367.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 185-1]
 gi|306815128|ref|ZP_07449281.1| hypothetical protein ECNC101_00943 [Escherichia coli NC101]
 gi|331660181|ref|ZP_08361117.1| 3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase)
           (PHI) [Escherichia coli TA206]
 gi|110345750|gb|ABG71987.1| hypothetical protein ECP_4027 [Escherichia coli 536]
 gi|190905802|gb|EDV65422.1| 3-hexulose-6-phosphate isomerase [Escherichia coli F11]
 gi|227834416|gb|EEJ44882.1| possible 3-hexulose-6-phosphate isomerase [Escherichia coli 83972]
 gi|294490130|gb|ADE88886.1| 6-phospho 3-hexuloisomerase [Escherichia coli IHE3034]
 gi|300300800|gb|EFJ57185.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 185-1]
 gi|300308028|gb|EFJ62548.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 200-1]
 gi|300408030|gb|EFJ91568.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 45-1]
 gi|305851497|gb|EFM51951.1| hypothetical protein ECNC101_00943 [Escherichia coli NC101]
 gi|307555960|gb|ADN48735.1| hypothetical protein ECABU_c43160 [Escherichia coli ABU 83972]
 gi|307628896|gb|ADN73200.1| hypothetical protein UM146_19310 [Escherichia coli UM146]
 gi|312948387|gb|ADR29214.1| hypothetical protein NRG857_19035 [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315284740|gb|EFU44185.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 110-3]
 gi|315293186|gb|EFU52538.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 153-1]
 gi|315296818|gb|EFU56110.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 16-3]
 gi|320197641|gb|EFW72253.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase /
           6-phospho-3-hexuloisomerase [Escherichia coli WV_060327]
 gi|323949283|gb|EGB45173.1| 6-phospho 3-hexuloisomerase [Escherichia coli H252]
 gi|323954042|gb|EGB49840.1| 6-phospho 3-hexuloisomerase [Escherichia coli H263]
 gi|324007506|gb|EGB76725.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 57-2]
 gi|324014678|gb|EGB83897.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 60-1]
 gi|331052749|gb|EGI24784.1| 3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase)
           (PHI) [Escherichia coli TA206]
          Length = 185

 Score = 36.6 bits (83), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 61/149 (40%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G++G         L   G   +F+   E    + G     DL IV S SG + 
Sbjct: 38  RVFCYGLGRAGFSMKAFTMRLMHMGKEVYFL--TETITPNFG---PGDLFIVSSASGETA 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL----PKEPESCPHGLAPTTSAIM 181
           +L A+   AR+F   +  +T+   + +    D+++ +      + +S      P  S   
Sbjct: 93  QLVALAKKARQFGGAVAVLTTNRHATITEFVDVIVQINAPSKNQKDSVFRSAQPMASLYE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L I DAL + +       E++ +  H
Sbjct: 153 QALLVIADALVMKMAAESGAPESELFKRH 181


>gi|293377675|ref|ZP_06623864.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium PC4.1]
 gi|292643675|gb|EFF61796.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Enterococcus faecium PC4.1]
          Length = 601

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSQKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLDYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + +  
Sbjct: 408 LTLLAKAIGDKKEL 421


>gi|284166925|ref|YP_003405204.1| signal transduction protein with CBS domains [Haloterrigena
           turkmenica DSM 5511]
 gi|284016580|gb|ADB62531.1| putative signal transduction protein with CBS domains
           [Haloterrigena turkmenica DSM 5511]
          Length = 141

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 3/93 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLT 303
           L+    G  AVV EG++  GI+T+ DI     +  D+     EDVM      + ED    
Sbjct: 27  LASNNVGA-AVVTEGEEPVGIVTDRDIALEVAQSDDVAATPAEDVMTAGLTTLQEDADAI 85

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + +++ N     VVD+  +  GIV   DL+
Sbjct: 86  EVSRAIKEENARRFPVVDENGELTGIVTLDDLV 118


>gi|229195158|ref|ZP_04321933.1| Transcriptional regulator, RpiR [Bacillus cereus m1293]
 gi|228588387|gb|EEK46430.1| Transcriptional regulator, RpiR [Bacillus cereus m1293]
          Length = 287

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQDATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|118589175|ref|ZP_01546582.1| inositol-5-monophosphate dehydrogenase [Stappia aggregata IAM
           12614]
 gi|118438504|gb|EAV45138.1| inositol-5-monophosphate dehydrogenase [Stappia aggregata IAM
           12614]
          Length = 500

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 59/119 (49%), Gaps = 22/119 (18%)

Query: 231 PLVKIG--CPLIDAITILSEKRFGC--VAVVDEGQ-------KLKGIITEGDIFRNFHKD 279
           PLV IG    L DA+ ++  KR+G   V VV  G        KL GI+T  D+    + D
Sbjct: 102 PLV-IGPDATLQDALDLM--KRYGISGVPVVQNGGSGGQTTGKLVGILTNRDVRFASNPD 158

Query: 280 LNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 ++ +D++  N  V  +D     A +LL Q+ I  L+VVDD +  IG++   D+
Sbjct: 159 QKIHELMTKDDLVTVNENVSQDD-----AKRLLHQNRIEKLLVVDDNRNCIGLITVKDM 212


>gi|323331051|gb|EGA72477.1| Imd2p [Saccharomyces cerevisiae AWRI796]
          Length = 523

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 3/76 (3%)

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KL G++T  DI   F +D ++L V+DVM KNP    +   L+   ++L++     L+VVD
Sbjct: 160 KLVGVVTSRDI--QFVED-SSLLVQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVD 216

Query: 322 DCQKAIGIVHFLDLLR 337
           +    + ++   DL++
Sbjct: 217 EKGNLVSMLSRTDLMK 232


>gi|300311240|ref|YP_003775332.1| CBS-domain-containing membrane protein [Herbaspirillum seropedicae
           SmR1]
 gi|300074025|gb|ADJ63424.1| CBS-domain-containing membrane protein [Herbaspirillum seropedicae
           SmR1]
          Length = 400

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKDLNTL 283
           H+ D +P+ ++G    D   +L  KR+    V+D G+  L+ I  + ++ R +H+     
Sbjct: 189 HTRDELPITRLGFSHEDLDEVL--KRYN--QVLDIGRDDLEEIFLQTEM-RAYHRRFGQT 243

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               VM ++   +   T L  A +LL+ H +  L V+D  +  IGI+   D L
Sbjct: 244 LCASVMSRDVVAVEFATGLDEAWRLLQAHRLRALPVIDRGRHVIGIISRSDFL 296


>gi|217967879|ref|YP_002353385.1| hypothetical protein [Dictyoglomus turgidum DSM 6724]
 gi|217336978|gb|ACK42771.1| CBS domain containing protein [Dictyoglomus turgidum DSM 6724]
          Length = 845

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 8/122 (6%)

Query: 219 CASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            A D+M    S P+V I     + +A  I+ +  +G + V + G KL GII+  DI +  
Sbjct: 312 LAKDIM----SYPVVTISPDISVKEAFKIMMKHGYGGLCVEENG-KLVGIISRRDIEKAI 366

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L    V+  M K    +  +T +    ++L + NI  + VV D  K +GI+   D+L
Sbjct: 367 NLKLTKKKVKSFMSKPVITVTPETPIWEIEKILVEKNIGRVPVV-DRDKIVGIITRQDIL 425

Query: 337 RF 338
           RF
Sbjct: 426 RF 427


>gi|219851836|ref|YP_002466268.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
 gi|219546095|gb|ACL16545.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
          Length = 490

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           DVM++   +P++     +  A  ++  +    + V+   Q L GI+T  DI         
Sbjct: 373 DVMNT--QVPVISEQSTIAVAARMMITQGVNHLPVLAPDQSLVGIVTSWDIANAVA--CG 428

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             S++ +M         D  + VA   + QH IS L V+D  Q  IG++
Sbjct: 429 YTSLDQIMSSQVITTTGDETIEVAASRMEQHRISALPVIDQAQHVIGLI 477


>gi|190613393|pdb|2RIF|A Chain A, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613394|pdb|2RIF|B Chain B, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613395|pdb|2RIF|C Chain C, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613396|pdb|2RIF|D Chain D, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613397|pdb|2RIH|A Chain A, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
 gi|190613398|pdb|2RIH|B Chain B, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
          Length = 141

 Score = 36.6 bits (83), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 244 TILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           T L++ R G   +   D  ++   +++E DI R   + L+       +  +P  +L+   
Sbjct: 29  TELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPITVLDTDP 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VA + +R+HNI  ++VV+   + +G++   DL
Sbjct: 89  VHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122


>gi|310644846|ref|YP_003949605.1| cbs domain containing membrane protein [Paenibacillus polymyxa SC2]
 gi|309249797|gb|ADO59364.1| CBS domain containing membrane protein [Paenibacillus polymyxa SC2]
          Length = 142

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 20/125 (16%)

Query: 230 IPLVKIGCPLIDA-----ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +P  ++ C   DA     +  +   RF  V ++D+  +  G +TEGD+  +  +    ++
Sbjct: 8   LPKQEVACVTADATLRQTLERMEYHRFTAVPILDKEGRYTGTVTEGDLLWHMKESEGKIT 67

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLR-QHNISVLM----------VVDDCQKAIGIVHFL 333
            E+      K +L+D  L V+M+ +    N+  L+          VVDD ++ IGIV   
Sbjct: 68  FENA----SKFMLKDVPLRVSMKPVSIDANMEDLINLAKVQNFVPVVDDMERFIGIVRRS 123

Query: 334 DLLRF 338
            ++ +
Sbjct: 124 QIIEY 128


>gi|293571869|ref|ZP_06682885.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E980]
 gi|291608123|gb|EFF37429.1| glutamine-fructose-6-phosphate transaminase [Enterococcus faecium
           E980]
          Length = 601

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSQKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLDYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + +  
Sbjct: 408 LTLLAKAIGDKKEL 421


>gi|17535655|ref|NP_496155.1| hypothetical protein R53.7 [Caenorhabditis elegans]
 gi|3879172|emb|CAA91351.1| C. elegans protein R53.7a, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 460

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           ASD++ SG+ +  V I   ++D    L + R   V V+D+ +++  II+   +    HK 
Sbjct: 221 ASDIL-SGNQLVSVSISSKILDLCEELHQNRLHRVVVLDDAKEVVNIISVRRVIAAIHKQ 279

Query: 280 LNTLSVEDVMIK-----------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             +L     + K           N  VI ++  +  AM+ +   + S L VVD  Q  IG
Sbjct: 280 NRSLHFAQWLSKSIGMSAIGTWENVAVISQNETVYRAMEDMLGFHYSALPVVDSKQNVIG 339

Query: 329 IVHFLDLLR 337
           ++   D+ +
Sbjct: 340 VITKTDICK 348


>gi|127512229|ref|YP_001093426.1| inositol-5-monophosphate dehydrogenase [Shewanella loihica PV-4]
 gi|126637524|gb|ABO23167.1| inosine-5'-monophosphate dehydrogenase [Shewanella loihica PV-4]
          Length = 488

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)

Query: 240 IDAITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           ++ + +L+EK  F    VVDE  +L GIIT  D+   F  D  + +V+ VM    +++  
Sbjct: 106 LEQLKVLTEKNGFAGYPVVDEANELVGIITGRDV--RFITDW-SRTVDQVMTPKERLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E T L    +L+  H +  ++VVD   +  G++   D  +
Sbjct: 163 PEGTPLDEVQKLMHAHRVEKVLVVDGDFRLKGLITVKDFQK 203


>gi|323497808|ref|ZP_08102822.1| RpiR family transcriptional regulator [Vibrio sinaloensis DSM
           21326]
 gi|323317155|gb|EGA70152.1| RpiR family transcriptional regulator [Vibrio sinaloensis DSM
           21326]
          Length = 282

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 82/190 (43%), Gaps = 7/190 (3%)

Query: 8   FKSVTRKG--HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
           ++  +RK    S+ ++      +  ++A K+   SLE S+    S     A  ++  +  
Sbjct: 77  YRPTSRKAIHGSISRSDDTSLVMAKLLASKQ--QSLERSIALNDSGNLEHAT-RLLHLAN 133

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ + G+G S  +   L+  L   G      H A     +   +  +D++I LS+SG S 
Sbjct: 134 KIQLAGVGASSLVAKDLSYKLMKIGHAVHCEHDAHIQIANASALNENDVLIALSYSGRSR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+  +   A+     +I I+    + +  +ADI L    + E      +  T+   QL I
Sbjct: 194 EILRVAQIAKGRKAKIITISQLAPTPLDKYADIKLMTAADEEHIRS--SSITARDSQLLI 251

Query: 186 GDALAIALLE 195
            D L IAL +
Sbjct: 252 TDLLFIALTQ 261


>gi|319947189|ref|ZP_08021423.1| CBS domain protein [Streptococcus australis ATCC 700641]
 gi|319747237|gb|EFV99496.1| CBS domain protein [Streptococcus australis ATCC 700641]
          Length = 212

 Score = 36.6 bits (83), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 8/142 (5%)

Query: 208 HPGGKLGTLF---VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + G  L TLF       +V+    S  LV     + DAI  L       + V+DEG+ L 
Sbjct: 59  YSGLDLETLFFFDTFQKEVVEIMTSPVLVTHDSYIQDAIITLFMYDADVLYVIDEGKLLL 118

Query: 265 GIITEGDIFR-NFHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVD 321
           GI++  D+ R + +  + T  V   M + P +I   +D  +  A  LL+ H I  L VVD
Sbjct: 119 GIMSRKDLLRASLNSSIQTTPVAVCMTRMPHIITCTKDMNILEAAALLQDHAIDSLPVVD 178

Query: 322 D--CQKAIGIVHFLDLLRFGII 341
           +   +K +G V    LL + I+
Sbjct: 179 EENDRKIVGTVTKSALLDYIIL 200


>gi|257895716|ref|ZP_05675369.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium Com12]
 gi|257832281|gb|EEV58702.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium Com12]
          Length = 601

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/134 (25%), Positives = 55/134 (41%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSQKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLDYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIALLESRNF 199
              LA A+ + +  
Sbjct: 408 LTLLAKAIGDKKEL 421


>gi|238894572|ref|YP_002919306.1| hypothetical protein KP1_2570 [Klebsiella pneumoniae NTUH-K2044]
 gi|238546888|dbj|BAH63239.1| hypothetical protein KP1_2570 [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 306

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 22/157 (14%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG------------TPSFFVHAAEASHGDLGMI--- 109
           GR+VI G G SG    +  S  +  G            T +       A++ DLG     
Sbjct: 65  GRLVIIGAGASGRTAIEAVSDYSPEGKHALVGLIAGGQTTAMAERETAANNYDLGAFELQ 124

Query: 110 ----TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
               +  D+++ L+ SG +  +   + +A     P+  IT +  S  A  ADI++     
Sbjct: 125 SLDFSNRDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVITQQPTSEAAQLADIIIAPQTG 184

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL--AIALLESRNFS 200
           PE+   GLA   + + Q  I + L   +A+ + R +S
Sbjct: 185 PEAVA-GLANPKAQLAQRQIVNMLTTGLAIRDGRVYS 220


>gi|159906128|ref|YP_001549790.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159887621|gb|ABX02558.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 126

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 261 QKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + + G+IT  D+   F +    +L  ++++DV  K    I E+  +T A Q++   ++S 
Sbjct: 41  ENIDGVITYRDLAHLFFEKGVFELMDITLKDVSTKEILTIDENADVTHAAQMMLHADVSG 100

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L+V+D+ + AIG++   D+LR
Sbjct: 101 LLVIDEQKNAIGVISQTDILR 121


>gi|150401222|ref|YP_001324988.1| hypothetical protein Maeo_0793 [Methanococcus aeolicus Nankai-3]
 gi|150013925|gb|ABR56376.1| protein of unknown function DUF39 [Methanococcus aeolicus Nankai-3]
          Length = 511

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           +A  IL E     + +VDE + L GIIT  DI R   ++ N  S+ ++M         D 
Sbjct: 409 EASKILIENGINHLPIVDENKNLVGIITSWDIARAVAQNKN--SILEIMTATVISSTVDE 466

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V  + +  +NIS   ++D  +K +G++   DL + 
Sbjct: 467 PIDVLARKMSIYNISGAPILDKNKKVVGMITAEDLSKL 504


>gi|45357983|ref|NP_987540.1| CBS domain-containing protein [Methanococcus maripaludis S2]
 gi|44920740|emb|CAF29976.1| CBS domain Related protein [Methanococcus maripaludis S2]
          Length = 321

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            D+M   D I  +       +A  I+ E   G V VVD+G KLKGI+T+GDI R
Sbjct: 120 KDIMTKKDEIVSISPYSSASEAQKIMVEYDIGRVLVVDDG-KLKGIVTKGDIVR 172


>gi|308182989|ref|YP_003927116.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori PeCan4]
 gi|308065174|gb|ADO07066.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori PeCan4]
          Length = 481

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAR 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|257884395|ref|ZP_05664048.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,501]
 gi|257887179|ref|ZP_05666832.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,141,733]
 gi|257820233|gb|EEV47381.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,231,501]
 gi|257823233|gb|EEV50165.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           faecium 1,141,733]
          Length = 601

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G     TL         VH A     +  ++++    I LS SG + 
Sbjct: 291 RIYIVACGTSYHAGLAGKQTLEELTQIPVEVHLASEFGYNTPLLSQKPFFIFLSQSGETA 350

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + + +L    R   P + IT+   S ++  A   L L   PE     +A T +   Q+A+
Sbjct: 351 DSRQVLVKINRLDYPSLTITNVAGSTLSREASFTLLLHAGPEIA---VASTKAYTAQIAV 407

Query: 186 GDALAIAL 193
              LA A+
Sbjct: 408 LTLLAKAI 415


>gi|226495213|ref|NP_001151563.1| CBS domain containing protein [Zea mays]
 gi|195647750|gb|ACG43343.1| CBS domain containing protein [Zea mays]
          Length = 550

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLL 302
           ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  +L DTL 
Sbjct: 84  MASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLA 143

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 144 VEALQKMVQGKFRHLPVVENGE----VIAILDIAK 174


>gi|120610791|ref|YP_970469.1| CBS domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
           AAC00-1]
          Length = 149

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           ++DA+ ++++K  G + V+D G+++ GI+TE D  R      +      V DVM +  + 
Sbjct: 25  MLDALRLMADKGIGALLVMD-GERIAGIVTERDYARKVALLGRTSGDTRVADVMTRAVRF 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +         + L+ ++ +  L VV++    +G++   DL++
Sbjct: 84  VRPAQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVK 125


>gi|94969977|ref|YP_592025.1| Cl- channel, voltage gated [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552027|gb|ABF41951.1| Cl- channel, voltage gated [Candidatus Koribacter versatilis
           Ellin345]
          Length = 613

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           R   V +VD+  KLKG+IT GD+ R    +D  T +V      +     ED LL  A   
Sbjct: 490 RHQGVLIVDDAGKLKGLITRGDLLRAMESEDAGTQTVLQAGTTSLLTAYEDELLFHAASR 549

Query: 309 LRQHNISVLMVVD--DCQKAIG 328
           + +  +  L VVD  D  K +G
Sbjct: 550 MLRAGVGRLPVVDRKDPTKILG 571


>gi|18312666|ref|NP_559333.1| hypothetical protein PAE1489 [Pyrobaculum aerophilum str. IM2]
 gi|18160141|gb|AAL63515.1| conserved protein with sugar isomerase (SIS) domain [Pyrobaculum
           aerophilum str. IM2]
          Length = 202

 Score = 36.6 bits (83), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 34/126 (26%), Positives = 63/126 (50%), Gaps = 6/126 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+SL+  L+ E    F   +E+I  +  ++++ G+G+SG +G   A  L   G  S+ + 
Sbjct: 17  LNSLDK-LKMEEIEAFVKTIEEIYHLNKKILVVGVGRSGLVGRAFAMRLRHLGARSYVLG 75

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                  + G     DL++ +S SG++  + A    A++    + AITS   S +   AD
Sbjct: 76  ETITPSVEEG-----DLVVAISGSGTTQIVVAAAEAAKKMKARVAAITSYYDSPLGRVAD 130

Query: 158 IVLTLP 163
           +V+ +P
Sbjct: 131 LVVYIP 136


>gi|268609150|ref|ZP_06142877.1| inosine 5'-monophosphate dehydrogenase [Ruminococcus flavefaciens
           FD-1]
          Length = 490

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++ + +   V +VD   KL GIIT  D+    +F+  ++ +  +D +I  P     
Sbjct: 113 DADELMGKYKISGVPIVDGTGKLVGIITNRDMRFLTDFNAKISEVMTKDNLITAPV---- 168

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            T L  A ++LR H I  L +VD      G++   D+ +
Sbjct: 169 GTTLEQAQEILRAHKIEKLPLVDGEGYLKGLITIKDIEK 207


>gi|225374685|ref|ZP_03751906.1| hypothetical protein ROSEINA2194_00305 [Roseburia inulinivorans DSM
           16841]
 gi|225213475|gb|EEG95829.1| hypothetical protein ROSEINA2194_00305 [Roseburia inulinivorans DSM
           16841]
          Length = 386

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFHK 278
           A +VM     +    I C   + I I  E +F  + V  D    + GII   D+    +K
Sbjct: 168 AKEVMVPRIDMTFANIDCTYDELIEIFKEDKFTRLPVYKDTTDNVIGIINMKDLL--LYK 225

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D    S++D+M + P    E          +R+ +IS+ +V+D+     G++   DLL 
Sbjct: 226 DREHFSIQDIM-REPYFTYEHKNTAELFMEMRKSSISLAIVLDEYGATAGLITLEDLLE 283


>gi|83647517|ref|YP_435952.1| nucleoside-diphosphate-sugar pyrophosphorylase [Hahella chejuensis
           KCTC 2396]
 gi|83635560|gb|ABC31527.1| nucleoside-diphosphate-sugar pyrophosphorylase [Hahella chejuensis
           KCTC 2396]
          Length = 351

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
           L++    +  AI ++ +       VVDE Q+L G +T+GD+ R    H  L+  SV  +M
Sbjct: 9   LIQPQASIEQAIEVIEKATLRIALVVDEQQRLLGTVTDGDVRRALINHTPLSA-SVVRIM 67

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              PKV   +      + ++ +  +  + VVD  ++ +G+   L++
Sbjct: 68  ESEPKVAEINDSRARILSIMERRKLLHIPVVDSQRRVVGLETLLNI 113


>gi|21228469|ref|NP_634391.1| hexulose-6-phosphate isomerase [Methanosarcina mazei Go1]
 gi|20906950|gb|AAM32063.1| hexulose-6-phosphate isomerase [Methanosarcina mazei Go1]
          Length = 219

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G G+SG +    A  L   G   + V   E +   +G   + D++I +S SG + 
Sbjct: 62  RIFVMGAGRSGLVAKAFAMRLMHLGFTVYVV--GETTTPAVG---QKDVVIAISGSGETR 116

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
            +  +    +     LI +TS+ +S +   +DI + LP + ++
Sbjct: 117 SIADLGKIVKDIGSTLITVTSKKESTLGRTSDITMVLPSKTKN 159


>gi|220931006|ref|YP_002507914.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Halothermothrix orenii H 168]
 gi|219992316|gb|ACL68919.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Halothermothrix orenii H 168]
          Length = 608

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +I +D L+IV+S SG + +  A L  AR     ++A+T+   S +A  AD VL L   PE
Sbjct: 335 IIDKDTLVIVVSQSGETADTLAGLRLAREKGAEVLALTNVVGSTIAREADRVLYLKAGPE 394

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                +A T + +  +++   LA+   + +    +D Y+
Sbjct: 395 IA---VASTKAYLTMVSVFYLLAVQFAKIKGTINDDEYM 430


>gi|330838326|ref|YP_004412906.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
 gi|329746090|gb|AEB99446.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
          Length = 216

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M KNP  +  DT ++ A  L+++H    L VVD+  K +G +   D++R
Sbjct: 3   VANRMAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMR 55


>gi|330835578|ref|YP_004410306.1| Cl- channel, voltage-gated family protein [Metallosphaera cuprina
           Ar-4]
 gi|329567717|gb|AEB95822.1| Cl- channel, voltage-gated family protein [Metallosphaera cuprina
           Ar-4]
          Length = 568

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L V +  I + KV   DT+ T A+ ++R++N+  + V+DD  + +GI++F D+
Sbjct: 447 LKVSECEISDIKVKASDTVRT-ALSIMRENNVLSVPVIDDGSRFLGIIYFQDI 498


>gi|329765474|ref|ZP_08257050.1| Inosine-5-monophosphate dehydrogenase, cystathionine beta-synthase
           [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137912|gb|EGG42172.1| Inosine-5-monophosphate dehydrogenase, cystathionine beta-synthase
           [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 298

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLNTLSVEDVMIKNPK 294
           ++DA  IL   R G + VV  G+K  GIITE DI ++      K +  + V+D M K+  
Sbjct: 33  ILDAKDILLRYRIGRL-VVKLGKKAIGIITEKDIAKSVSIFSGKPIEKILVKDAMSKDLV 91

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   + +    + +  HNIS +++ D  +  +GI+   DL+
Sbjct: 92  TVPSTSSIYDCAKQMITHNISSIIINDKRENLVGIITKTDLV 133


>gi|255024730|ref|ZP_05296716.1| CBS domain protein [Listeria monocytogenes FSL J1-208]
          Length = 176

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 40  VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 95

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 96  VIPVVKDDLTLIGIVSRQDILK 117


>gi|222094570|ref|YP_002528630.1| transcriptional regulator, rpir family [Bacillus cereus Q1]
 gi|221238628|gb|ACM11338.1| transcriptional regulator, RpiR family [Bacillus cereus Q1]
          Length = 262

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 157 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 214

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 215 RIASIASRMTQLNMIDALYV 234


>gi|161950062|ref|YP_404285.2| putative DNA-binding transcriptional regulator [Shigella
           dysenteriae Sd197]
 gi|309784687|ref|ZP_07679320.1| uncharacterized HTH-type transcriptional regulator yfhH [Shigella
           dysenteriae 1617]
 gi|308927057|gb|EFP72531.1| uncharacterized HTH-type transcriptional regulator yfhH [Shigella
           dysenteriae 1617]
          Length = 282

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK--------------AILYYA-----R 135
            V    A    +   + DDL++ +S++G   EL               AI  +      R
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQR 222

Query: 136 RFSIPLIAITSE----NKSVVACHADIVLT 161
           R S  L  I  E    + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATKSASISACHAQGMLT 252


>gi|146340150|ref|YP_001205198.1| inosine 5'-monophosphate dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192956|emb|CAL76963.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Bradyrhizobium sp. ORS278]
          Length = 495

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L DA+ ++ +  F  + VV  G K     L GI+T  D+   F  D      E +  +N 
Sbjct: 108 LADALALMKDYGFSGIPVVTGGGKGIPGKLVGILTNRDV--RFATDPRQKISELMTHENL 165

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L +H I  L+VVDD  + +G++   D+
Sbjct: 166 VTVREGVGQDEAKKILHKHRIEKLLVVDDQYRCVGLITVKDM 207


>gi|119898492|ref|YP_933705.1| putative nucleotidyltransferase [Azoarcus sp. BH72]
 gi|119670905|emb|CAL94818.1| putative nucleotidyltransferase [Azoarcus sp. BH72]
          Length = 632

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P   A+  ++ +  GC+ V D+ Q+  GI+T+ D+         DL +L + +VM  NP 
Sbjct: 186 PTRRALEEMAAQHLGCMIVADDDQRPLGILTQSDLLPRVVLAGFDL-SLPISEVMTANPH 244

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +        A   +  H +  L+V+D   +  G+V   DL 
Sbjct: 245 QLPATASAYDAALEMATHGVRHLLVIDSDGRLKGVVSERDLF 286


>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
          Length = 149

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLS 284
           D +  V     + +A+ +L+E+R G V + ++GQ   GI++E DI R       D+ T +
Sbjct: 18  DGVVTVPPATTVAEAVRMLAERRIGGVVISEDGQTPLGILSERDIVRVLSAQGADVLTAT 77

Query: 285 VEDVMIKNPKVILED 299
           V+ +M  N +    D
Sbjct: 78  VDALMTTNLQTCTRD 92


>gi|113460566|ref|YP_718630.1| inosine 5'-monophosphate dehydrogenase [Haemophilus somnus 129PT]
 gi|112822609|gb|ABI24698.1| inosine-5'-monophosphate dehydrogenase [Haemophilus somnus 129PT]
          Length = 487

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 17/95 (17%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA----- 305
           F    VVDE + L GIIT  D    F  DLN  +V D M   PK    D L+TV      
Sbjct: 118 FAGYPVVDEQKGLVGIITGRDT--RFVSDLNK-TVADFM--TPK----DRLVTVKEGATR 168

Query: 306 ---MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                L+ +H +  ++VVDD  K  G++   D  +
Sbjct: 169 EEIFHLMHEHRVEKVLVVDDSFKLKGMITLKDYQK 203


>gi|147919879|ref|YP_686370.1| hypothetical protein RCIX1866 [uncultured methanogenic archaeon
           RC-I]
 gi|110621766|emb|CAJ37044.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 324

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 1/100 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DAI+++  +  G + V+DE +++ GI+TE D+ R     +    V D+M +       
Sbjct: 146 LEDAISLMISRSVGGLPVIDEERRIVGILTERDVVRIMGDAVVGRKVSDIMSRQVTTAPP 205

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  +  A +++   +   L V        GI+   D++R+
Sbjct: 206 DMTIEEAARMMVSSDFRRLPVT-AGNLVCGIITATDIMRY 244


>gi|15643094|ref|NP_228137.1| RpiR family transcriptional regulator [Thermotoga maritima MSB8]
 gi|7388396|sp|Q9WYG1|Y326_THEMA RecName: Full=Uncharacterized HTH-type transcriptional regulator
           TM_0326
 gi|4980827|gb|AAD35413.1|AE001714_4 transcriptional regulator, RpiR family [Thermotoga maritima MSB8]
          Length = 280

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 5/87 (5%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPH 171
           DL++ +S +G +  +      A+   +P++ IT   KS +A ++D+VL T  KE +    
Sbjct: 179 DLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAKYSDVVLATNTKETKIRTD 238

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
            +   TS I+QL I D +   LL +R+
Sbjct: 239 AM---TSRIVQLVILDTI-YTLLAARD 261


>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
 gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
          Length = 173

 Score = 36.6 bits (83), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 24/38 (63%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           L  A+T+L ++R G + V  EG  L+GI++E DI R  
Sbjct: 54  LSTAVTVLRDRRIGALLVTGEGGALEGILSERDIVRKL 91


>gi|301167729|emb|CBW27313.1| inosine-5'-monophosphate dehydrogenase [Bacteriovorax marinus SJ]
          Length = 489

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D  ++  E++   + VVD      GIIT  D    F  DL ++ V+D+M    ++I  
Sbjct: 107 LSDVFSLARERKVTGMPVVDRDNICVGIITSRDT--RFESDL-SVKVKDIMTTGDRLITA 163

Query: 299 DTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +    A  LL +H I  L V+D+  +  G++   D+++
Sbjct: 164 EKGIDPDKAQALLHKHRIEKLPVLDEKGRLAGLITIKDIMK 204


>gi|294785240|ref|ZP_06750528.1| phosphosugar-binding protein [Fusobacterium sp. 3_1_27]
 gi|294486954|gb|EFG34316.1| phosphosugar-binding protein [Fusobacterium sp. 3_1_27]
          Length = 352

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 113 DLIIVLSWSG-SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           DL+I +S SG S+  + A+ Y  +  +IP IAITS N S +A  ++++L L
Sbjct: 88  DLVITISQSGKSASTISALKYVKKCKNIPSIAITSNNMSTIAKESNMILDL 138


>gi|313637986|gb|EFS03281.1| conserved protein YtoI [Listeria seeligeri FSL S4-171]
          Length = 411

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VV+   +L G++T  DI      D N ++S+E VM KNP  +     +     ++   +I
Sbjct: 232 VVNRAMRLTGMVTSKDIL-----DKNPSISIERVMTKNPLTVGPKMSVASVAHMMIWESI 286

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            V+ VV D    IGIV   D+L+
Sbjct: 287 EVIPVVKDDLTLIGIVSRQDILK 309


>gi|309777353|ref|ZP_07672314.1| 3-hexulose-6-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914894|gb|EFP60673.1| 3-hexulose-6-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 190

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 59/143 (41%), Gaps = 9/143 (6%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K +    +V   G G+S  +    +  L   G  S+ V            I   DL+I+ 
Sbjct: 36  KCREENRKVFCAGAGRSRLMMQAFSMRLMHMGMASYMVQEISTP-----AIREHDLLIIG 90

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG +  L  +L  A++     I ITS   S +A  A+ V+ +P    +   GL P  S
Sbjct: 91  SGSGETKTLSIMLQTAKKEHADSILITSNADSSMAHEANTVIHIP--TAAATDGLQPGGS 148

Query: 179 AIMQ--LAIGDALAIALLESRNF 199
              Q  L + D+    L+E  NF
Sbjct: 149 IFEQSMLILLDSTFKRLMEKGNF 171


>gi|289434856|ref|YP_003464728.1| DRTGG/CBS domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171100|emb|CBH27642.1| DRTGG/CBS domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 437

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VV+   +L G++T  DI      D N ++S+E VM KNP  +     +     ++   +I
Sbjct: 227 VVNRAMRLTGMVTSKDIL-----DKNPSISIERVMTKNPLTVGPKMSVASVAHMMIWESI 281

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            V+ VV D    IGIV   D+L+
Sbjct: 282 EVIPVVKDDLTLIGIVSRQDILK 304


>gi|239997020|ref|ZP_04717544.1| inosine 5'-monophosphate dehydrogenase [Alteromonas macleodii ATCC
           27126]
          Length = 489

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 7/93 (7%)

Query: 249 KRFGCVA--VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTV 304
           KR G     V D+   L GI+T  D+   F K LN L + +VM     ++   E     V
Sbjct: 114 KRLGYSGFPVTDKDNNLIGIVTGRDL--RFEKRLN-LPIRNVMTGKDDLVTVKEGASSDV 170

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + L+ +H I  ++VVDD  K  G++   D  +
Sbjct: 171 VLDLMHEHRIEKILVVDDAFKLTGLITVKDFQK 203


>gi|49480271|ref|YP_035075.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|206975585|ref|ZP_03236497.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           H3081.97]
 gi|217958411|ref|YP_002336959.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH187]
 gi|228913510|ref|ZP_04077139.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229137628|ref|ZP_04266234.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST26]
 gi|301052470|ref|YP_003790681.1| RpiR family transcriptional regulator [Bacillus anthracis CI]
 gi|49331827|gb|AAT62473.1| transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|206746047|gb|EDZ57442.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           H3081.97]
 gi|217066208|gb|ACJ80458.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH187]
 gi|228645854|gb|EEL02082.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST26]
 gi|228846097|gb|EEM91119.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300374639|gb|ADK03543.1| transcriptional regulator, RpiR family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 287

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|90424562|ref|YP_532932.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB18]
 gi|90106576|gb|ABD88613.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB18]
          Length = 497

 Score = 36.6 bits (83), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 7/102 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           L +A+ ++S   F  + VV    K     L GI+T  D+   F  D N    E +  +N 
Sbjct: 110 LGEALALMSAHGFSGIPVVTGASKGVPGKLVGILTNRDV--RFATDPNQKISELMTHENL 167

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E      A ++L QH I  L+VVD+  + +G++   D+
Sbjct: 168 VTVREGVSQAEAKRMLHQHRIEKLLVVDEQYRCVGLITVKDM 209


>gi|307266315|ref|ZP_07547855.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918693|gb|EFN48927.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 484

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 49/97 (50%), Gaps = 7/97 (7%)

Query: 241 DAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           DA  +++  R   V + VD   KL GIIT  DI   F  DL+   + +VM K+  V    
Sbjct: 109 DAAELMARYRISGVPITVD--SKLVGIITNRDI--RFEDDLDK-PIREVMTKDNLVTAPP 163

Query: 300 -TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A Q+L++H I  L +VD+     G++   D+
Sbjct: 164 GTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDI 200


>gi|254568830|ref|XP_002491525.1| Activating gamma subunit of the AMP-activated Snf1p kinase complex
           [Pichia pastoris GS115]
 gi|238031322|emb|CAY69245.1| Activating gamma subunit of the AMP-activated Snf1p kinase complex
           [Pichia pastoris GS115]
 gi|328351964|emb|CCA38363.1| Nuclear protein SNF4 [Pichia pastoris CBS 7435]
          Length = 324

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLSVEDV 288
           V +  P+ID I +LS K    V +VD   KL  +    D+        + DL +LSV + 
Sbjct: 205 VTMETPVIDVIHLLSNKCVSSVPIVDGEGKLVNVYEAVDVLGLIKGGMYTDL-SLSVGEA 263

Query: 289 MIKNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++  +         L D+L T+ M+ LR+  I  L +VD     +G++   D+L +
Sbjct: 264 LMRRAEDFEGVYTCTLNDSLATI-METLRKSRIHRLFIVDTDTSLLGVITLSDILSY 319


>gi|154484795|ref|ZP_02027243.1| hypothetical protein EUBVEN_02513 [Eubacterium ventriosum ATCC
           27560]
 gi|149734643|gb|EDM50560.1| hypothetical protein EUBVEN_02513 [Eubacterium ventriosum ATCC
           27560]
          Length = 605

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 7/130 (5%)

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           +G +G  +   LA T        A+E  + D  +IT +DL+IV+S SG + + KA L+ A
Sbjct: 303 AGMVGKYVIEKLARTEVTVDI--ASEFRYRD-PIITPEDLVIVVSQSGETADTKAALHLA 359

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
                 ++++ +   S +A  +D+VL     PE     +A T +  +Q+++   LA  + 
Sbjct: 360 HEKGAKVLSVVNVKGSSIARESDMVLYTHAGPEI---SVASTKAFSVQMSVMYLLAFEMA 416

Query: 195 ESR-NFSEND 203
            ++ +  EN+
Sbjct: 417 YAKGHIDENE 426


>gi|88604259|ref|YP_504437.1| sugar isomerase (SIS) [Methanospirillum hungatei JF-1]
 gi|88189721|gb|ABD42718.1| 3-hexulose-6-phosphate isomerase [Methanospirillum hungatei JF-1]
          Length = 194

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 29/107 (27%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G G+SG +    A  L   G  S+ V              ++D +I  S SG + 
Sbjct: 32  RIFVIGAGRSGFVAKSFAMRLMHLGLTSYVVGETVTPS-----FHKNDTLIAFSGSGKTK 86

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
            +       R+    +  IT    S +A  AD V+ L  E ESC  G
Sbjct: 87  SVMEACETTRQIGGQICLITGTRVSPMAELADCVVLLDTEEESCHVG 133


>gi|315221609|ref|ZP_07863529.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           F0211]
 gi|315189443|gb|EFU23138.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           F0211]
          Length = 493

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++   R   V VV+  E +KL GIIT  D+   F  D N      +  KN      
Sbjct: 112 DAEELMERYRISGVPVVETLENRKLVGIITNRDM--RFITDYNQPISAHMTSKNLVTAPV 169

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 170 GTDLETAERILHEHRIEKLPLVDDYGRLSGLITIKDI 206


>gi|313633081|gb|EFR99985.1| conserved protein YtoI [Listeria seeligeri FSL N1-067]
          Length = 442

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VV+   +L G++T  DI      D N ++S+E VM KNP  +     +     ++   +I
Sbjct: 232 VVNRAMRLTGMVTSKDIL-----DKNPSISIERVMTKNPLTVGPKMSVASVAHMMIWESI 286

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
            V+ VV D    IGIV   D+L+
Sbjct: 287 EVIPVVKDDLTLIGIVSRQDILK 309


>gi|311071004|ref|YP_003975927.1| 6-phospho-3-hexuloisomerase [Bacillus atrophaeus 1942]
 gi|310871521|gb|ADP34996.1| 6-phospho-3-hexuloisomerase [Bacillus atrophaeus 1942]
          Length = 185

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 60/149 (40%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++   G G+SG +    A  +   G  ++ V            +   DL+I+ S SG + 
Sbjct: 38  QIFTAGAGRSGLMAKSFAMRMMHLGLNAYIVGETLTPP-----LHDGDLVIIGSGSGETK 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIM 181
            L      AR     + A+T   +S +   +D+++ +P  P+    G    + P  S   
Sbjct: 93  NLIHTAEKARSLKAVIAALTINPESSIGSQSDLIIKMPGSPKDKSEGDYKTIQPMGSLFE 152

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q  L   DA+ + ++E +  +    +  H
Sbjct: 153 QTLLLFYDAVILKIMEKKGLNSQTMFTKH 181


>gi|225620072|ref|YP_002721329.1| glucosamine--fructose-6-phosphate aminotransferase [Brachyspira
           hyodysenteriae WA1]
 gi|225214891|gb|ACN83625.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Brachyspira hyodysenteriae WA1]
          Length = 608

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 9/142 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           RV I G G + H   IG +L     +   P     A+E  + +  ++T   L I +S SG
Sbjct: 294 RVYIIGCGTAMHAAMIGKRLIED--NCRIPVECEIASEFRYKN-PILTEKTLSIFISQSG 350

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +  A L   +      +AI + N S +A +AD V+     PE     +A T +  +Q
Sbjct: 351 ETADTLAALNLVKEKGYKTLAIVNVNSSSIARNADYVIYTYAGPEI---SVASTKAYSVQ 407

Query: 183 LAIGDALAIALLESRNFSENDF 204
           +AI   +   ++ +R   +ND+
Sbjct: 408 MAIMYLITFKIISARKIKDNDY 429


>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
 gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
          Length = 142

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 5/105 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           ++DA+ ++ EK    + +++ GQ L GI TE D  R      K      + +VM   P  
Sbjct: 24  VLDALHVMMEKNISALLIMESGQ-LLGIFTERDYARKIILQGKSSADTFLAEVMTGQPIT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I  D  + V M+++   +I  L VV++    IG+V   D+++F I
Sbjct: 83  ISPDDHIEVCMEIMTNKHIRHLPVVNET-GVIGMVSIGDVVKFII 126


>gi|160899044|ref|YP_001564626.1| RpiR family transcriptional regulator [Delftia acidovorans SPH-1]
 gi|160364628|gb|ABX36241.1| transcriptional regulator, RpiR family [Delftia acidovorans SPH-1]
          Length = 325

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG---DLGMITRDDLIIVLSWSG 122
           RV+  G G S H+ +  A  L         V +A  S      +  +T  D++I +S   
Sbjct: 152 RVLFMGFGSSHHVAAFGADVLQPYLPQVVEVTSAGGSEQAVRRMTGLTEQDVLIAISLPR 211

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            S E  A+  +AR+     IAIT E+ S +A  AD  L  P       H L P +S +  
Sbjct: 212 YSREAVALTAHARQRGALTIAITDESTSPLAREADYTLLAPAS-----HPLLP-SSPMAA 265

Query: 183 LAIGDALAIALLES 196
           +A+ +ALA  ++ +
Sbjct: 266 MAMVEALATQVIRA 279


>gi|118444305|ref|YP_879123.1| hypothetical protein NT01CX_0657 [Clostridium novyi NT]
 gi|118134761|gb|ABK61805.1| two CBS domain containing protein [Clostridium novyi NT]
          Length = 138

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 18/117 (15%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------KDLNTLSVE 286
           KI   +  A+  +   R+  + ++DE  K  G ITEGD+            K+ N +S++
Sbjct: 17  KITSTMRQALERMEYHRYTAIPIIDEEGKYIGTITEGDMLWKLKNTPELDFKNTNKVSLK 76

Query: 287 DV--MIKNPKVILE---DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           DV   +KN  V +    + L+++A+      N + + VVDD    IGI+   +++++
Sbjct: 77  DVPRNVKNSPVHIRSDIEDLISLAV------NQNFVPVVDDNDVFIGIIKRSEIIQY 127


>gi|15678277|ref|NP_275392.1| hypothetical protein MTH249 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|7388382|sp|O26351|Y249_METTH RecName: Full=Uncharacterized protein MTH_249
 gi|2621299|gb|AAB84755.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 197

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 12/105 (11%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM--ITRDDLIIVLSWSGSS 124
           V I G G+S  IG   A  L   G   F VH      GD+    I  +D +I +S SG +
Sbjct: 43  VFIVGTGRSELIGKAFAMRLMHLG---FKVHVV----GDVTTPAIRDEDCLIAISGSGET 95

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP---KEP 166
             +      +R     ++A+T+  +S +  ++D+V+ +P   KEP
Sbjct: 96  KTVTLAAETSRSVGATVVAVTATPESTLTGYSDVVICIPSKTKEP 140


>gi|119717867|ref|YP_924832.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
 gi|119538528|gb|ABL83145.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
          Length = 500

 Score = 36.6 bits (83), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 1/94 (1%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLT 303
           +  E R     VVD   +L GIIT  D+      +  T  V++VM   P +    D    
Sbjct: 115 LAGEYRISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEVMTPMPLITAPPDISRE 174

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A  LLRQH    L +VD   +  G++   D ++
Sbjct: 175 DATLLLRQHKRERLPLVDAQGRLAGLITVKDFVK 208


>gi|311070823|ref|YP_003975746.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
 gi|310871340|gb|ADP34815.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
          Length = 283

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++  +S+SG + E+  +L  AR   I  +++T  +++ V+  AD+ L      E  P  
Sbjct: 179 DIVFAISFSGETQEMIDLLSMAREKGITTMSLTQFSQTSVSSLADVSLYTAHSNE-APFR 237

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
            A T+S + QL + D L + +   R + E   Y+
Sbjct: 238 SAATSSRLAQLFMIDTLFLGMAAER-YEETVGYI 270


>gi|254415827|ref|ZP_05029584.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196177254|gb|EDX72261.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1218

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 52/98 (53%), Gaps = 8/98 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKV 295
           PL D   ++ + R  CV V+ +G +L G++TE D  R    D+N   L+  DVM +   V
Sbjct: 59  PLPDW-RLMKQARTSCVLVM-QGMQLLGLLTEQDFVRLAALDINLDALTAADVMTRK-LV 115

Query: 296 ILEDT---LLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           IL  +    +T+ + L +QH I  L + ++    +GIV
Sbjct: 116 ILNASDCQDVTIILNLFQQHGIHHLPIFNESGYLLGIV 153


>gi|56417077|ref|YP_154151.1| glucosamine--fructose-6-phosphate aminotransferase [Anaplasma
           marginale str. St. Maries]
 gi|222475443|ref|YP_002563860.1| glucosamine--fructose-6-phosphate aminotransferase (glmS)
           [Anaplasma marginale str. Florida]
 gi|56388309|gb|AAV86896.1| glucosamine--fructose-6-phosphate aminotransferase [Anaplasma
           marginale str. St. Maries]
 gi|222419581|gb|ACM49604.1| glucosamine--fructose-6-phosphate aminotransferase (glmS)
           [Anaplasma marginale str. Florida]
          Length = 608

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 35/273 (12%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S +F C  +  K++   + I G G S   G      L S       +  A         I
Sbjct: 280 SVEFACNADLFKSLT-HLTIVGSGSSYMAGLIAKYWLESIANIRVLLSIASEFRYHRMQI 338

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           + +D+ + +S SG + +  A L +ARR    +I++T+  ++ +   +DI L +   PE  
Sbjct: 339 SENDVFLFISQSGETADTLAALRHARRQHSTVISLTNVPRNSMESISDIALKILAGPEV- 397

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY----------VLHPGGKLGT-LFV 218
             G+A T +   QLA+    ++ L + R       Y            H    LGT +  
Sbjct: 398 --GVASTKTFSAQLAVLACFSLWLAKVRCVIAQSTYEQLLEALQCVAQHASEALGTSIES 455

Query: 219 CASDVMHSGDSIPLVKIGC--------------PLIDAITILS-EKRFGCVAVVDEGQKL 263
            A+ ++H    I + +  C                I  I I S E + G +A+VDE   +
Sbjct: 456 VANLILHYNRVIIMGRGTCYGVALEAALKIRELSYIHTIGIASGELKHGSIALVDESLPV 515

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             I    + F       N +S+++V  +   V+
Sbjct: 516 IAIAPYNETFTK-----NLVSIQEVSARKGIVV 543


>gi|301107764|ref|XP_002902964.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098082|gb|EEY56134.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 438

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FH-KDLNTLSVEDVM 289
           +A+  ++++ FG V VVD+ Q++ GI TE D  R   F  KD   L V DVM
Sbjct: 330 EAVEEMAKRDFGAVLVVDKEQRVLGIFTERDYIRKVLFEVKDPTKLLVTDVM 381


>gi|269926917|ref|YP_003323540.1| CBS domain containing membrane protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790577|gb|ACZ42718.1| CBS domain containing membrane protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 132

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 12/120 (10%)

Query: 220 ASDVMHSGDSIPLVKIGCPLI--DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           A D+M +    P+V +   +   D   IL+EK      VVD+  ++ GI++E D+     
Sbjct: 3   ARDIMTT----PVVTVTADMSIRDLAKILTEKGISGAPVVDDSGRVVGIVSEADVIAK-- 56

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              N  +V DVM        EDT + V   L+  + I+ + V+    + +GIV   D++R
Sbjct: 57  ---NGFTVADVMQSQVISASEDTPVEVICSLMTNNKINRVPVL-SGDRLVGIVTRADIVR 112


>gi|78356516|ref|YP_387965.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218921|gb|ABB38270.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 485

 Score = 36.6 bits (83), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DT 300
           A+ I+ E R   + VV + + L GI+T  D+   F  DL    V +VM     V +   T
Sbjct: 109 ALQIMREYRVSGLPVVKDAE-LVGILTNRDV--RFVTDLEGTRVHEVMTSEELVTVPVGT 165

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  A   L +H I  L+VVD+  +  G++   D+
Sbjct: 166 TLDEARHHLHEHRIEKLLVVDENNRLKGLITMKDI 200


>gi|297209731|ref|ZP_06926127.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910743|ref|ZP_07128193.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|296885404|gb|EFH24341.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300887723|gb|EFK82918.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus TCH70]
          Length = 423

 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     ++ D+M 
Sbjct: 276 IQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGIRGHK-----TLRDMMQ 330

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++
Sbjct: 331 QHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLI 370


>gi|229016151|ref|ZP_04173103.1| Transcriptional regulator, RpiR [Bacillus cereus AH1273]
 gi|229022388|ref|ZP_04178926.1| Transcriptional regulator, RpiR [Bacillus cereus AH1272]
 gi|228738869|gb|EEL89327.1| Transcriptional regulator, RpiR [Bacillus cereus AH1272]
 gi|228745105|gb|EEL95155.1| Transcriptional regulator, RpiR [Bacillus cereus AH1273]
          Length = 287

 Score = 36.6 bits (83), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|319440530|ref|ZP_07989686.1| signal transduction protein [Corynebacterium variabile DSM 44702]
          Length = 633

 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 60/124 (48%), Gaps = 7/124 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIF-RNF 276
           SD+ H    +  V+    + +A  ++ E+R  C+ VVD    G++L GIIT+ D+  R  
Sbjct: 160 SDLDHHRRDLVTVEADVTVAEAAALMGEQRVSCLPVVDSTAGGRRLVGIITDRDLRSRVL 219

Query: 277 HKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA--IGIVHFL 333
              ++  + V  +M  +P  +  +  +  AM  +   +I  L V D  Q    +GI+   
Sbjct: 220 AVGVDAGVPVRQIMTPDPVSVEPEVTVFEAMLRMSDLHIHHLPVTDASQGGVLVGILAAS 279

Query: 334 DLLR 337
           D++R
Sbjct: 280 DVMR 283


>gi|319649703|ref|ZP_08003859.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
 gi|317398865|gb|EFV79547.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
          Length = 143

 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 8/105 (7%)

Query: 237 CPLIDAI----TILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           C L+D +      + E   G + +VD  +KL G+IT+ DI       K   +  VED+M 
Sbjct: 15  CSLLDNVYEVAVKMKELNVGAIPIVD-NEKLVGMITDRDIVLRCVAEKHPASSKVEDIMS 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   +  DT    A +L+ +H I  L VV +  K +GIV   D 
Sbjct: 74  SHLVTVTRDTEAREAARLMAEHQIRRLPVV-EGDKLVGIVSLGDF 117


>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 177

 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 4/88 (4%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G V V+++G+ + GI+TE DI       +K  + + ++D+M      I   T L  A  +
Sbjct: 37  GSVVVIEDGRPI-GIVTEKDILYKVVSKNKLPSKVKLKDIMSTPLITIKPTTSLREAADI 95

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +R+  I  L VVDD    IGIV   D+L
Sbjct: 96  MRKRGIRRLPVVDDNGNLIGIVTDNDIL 123


>gi|167770652|ref|ZP_02442705.1| hypothetical protein ANACOL_01998 [Anaerotruncus colihominis DSM
           17241]
 gi|167667247|gb|EDS11377.1| hypothetical protein ANACOL_01998 [Anaerotruncus colihominis DSM
           17241]
          Length = 289

 Score = 36.2 bits (82), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 14/182 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ VQ  L++   E+R LS   + L  +   +   AV+ +   + R++  G+G S     
Sbjct: 102 NALVQKVLQT---EQRALSETAALLDVK---ELDRAVDYLSQAR-RIIFFGVGASFTAAL 154

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K +            V+ A         ++ +D+ +V S+SGS+ +  A+   A++    
Sbjct: 155 KTSHKFLRIEPKVNCVNDAHTQAMLAATMSAEDVAVVFSYSGSTKDTNAVAELAKKNGAK 214

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++AIT   KS +    D++L        C     P  S      I  A  + LL +  + 
Sbjct: 215 VVAITRFQKSPLTEFTDVILL-------CGANEGPLQSGSASADISQAFLVDLLYTEYYR 267

Query: 201 EN 202
            N
Sbjct: 268 RN 269


>gi|332796564|ref|YP_004458064.1| 6-phospho 3-hexuloisomerase [Acidianus hospitalis W1]
 gi|332694299|gb|AEE93766.1| 6-phospho 3-hexuloisomerase [Acidianus hospitalis W1]
          Length = 173

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G+V++ G G+SG +G   A  L   G  ++ +            I ++DL I +S SG 
Sbjct: 14  NGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVLGETIVPA-----IGKNDLAIAISGSGR 68

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           +  +      A+     LIA+TS   S +   AD+V+ +P
Sbjct: 69  TRLILTAAEAAKEAKATLIAVTSYADSPIGKIADVVVEVP 108


>gi|326796576|ref|YP_004314396.1| nucleotidyl transferase [Marinomonas mediterranea MMB-1]
 gi|326547340|gb|ADZ92560.1| Nucleotidyl transferase [Marinomonas mediterranea MMB-1]
          Length = 350

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDT 300
           A+ I++ +      VVD+ +KL G+IT+GDI R     L+ T SV  VM  NP      T
Sbjct: 17  ALEIINSEALRIALVVDDNEKLIGVITDGDIRRGILNGLSLTESVGAVMTTNPVTAEVGT 76

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                  ++ +  I  + ++DD  K  G+
Sbjct: 77  SKRKLSNIMGEKGILSIPLIDDFGKIAGL 105


>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
          Length = 214

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++V  VM  NP  I +DT +  AM L+ +  +  L V+D  +K +GIV   DLL
Sbjct: 1   MTVSRVMTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLL 54


>gi|150398928|ref|YP_001322695.1| homoserine O-acetyltransferase [Methanococcus vannielii SB]
 gi|150011631|gb|ABR54083.1| homoserine O-acetyltransferase [Methanococcus vannielii SB]
          Length = 492

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 25/92 (27%), Positives = 50/92 (54%), Gaps = 4/92 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP-KVILE 298
           A +++  K    + VV    KL GIIT  D+ ++  ++  +  + +  +M KN     ++
Sbjct: 391 AASLMVSKNITHIPVVSNENKLLGIITAWDVSKSIAEENSIENIKISQMMTKNVITAFID 450

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D +  +A+++ +++NIS L VVD     IG++
Sbjct: 451 DKIEKIAIKM-QEYNISCLPVVDQNGLVIGMI 481


>gi|150376785|ref|YP_001313381.1| RpiR family transcriptional regulator [Sinorhizobium medicae
           WSM419]
 gi|150031332|gb|ABR63448.1| transcriptional regulator, RpiR family [Sinorhizobium medicae
           WSM419]
          Length = 287

 Score = 36.2 bits (82), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+I+  S+SG + EL      AR   +P IA+T ++ S VA  ADI +     P   P G
Sbjct: 177 DVIVGSSFSGRNAELVRAFILAREAKVPTIALT-QSGSPVAQAADITV-----PVDLPEG 230

Query: 173 ---LAPTTSAIMQLAIGDALA 190
                PT++ I  LA+ D +A
Sbjct: 231 NNIYRPTSTRIAYLALLDIVA 251


>gi|330505331|ref|YP_004382200.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328919617|gb|AEB60448.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 643

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 235 IGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVM 289
           IGC    PL DA+ ++ E+  G + V+D   K  GI T  D+ R     ++    ++++M
Sbjct: 188 IGCAPDTPLRDAVRLMHEQHVGSIVVLDPADKPLGIFTLRDLRRVVADGVDLAQPIDNLM 247

Query: 290 IKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             NP  +  D +    A+ +  +H   V +V  + +K  G++   DL 
Sbjct: 248 TPNPFHLAPDASAFDAAIAMTERHIAHVCLV--EHEKLCGVISERDLF 293


>gi|227832309|ref|YP_002834016.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262183834|ref|ZP_06043255.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453325|gb|ACP32078.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 504

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 5/100 (5%)

Query: 240 IDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           ID + T+ +  R   + VVD+   L GI T  D+   F  D  +  V ++M   P V+ +
Sbjct: 116 IDEVDTLCARYRISGLPVVDKQGTLVGICTNRDM--RFEADF-SRKVSEIMTPMPLVVAK 172

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +    A++LL  + +  L +VDD  K +G++   D ++
Sbjct: 173 EGVSKEEALELLSANKVEKLPIVDDANKLVGLITVKDFVK 212


>gi|224031159|gb|ACN34655.1| unknown [Zea mays]
          Length = 550

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLL 302
           ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  +L DTL 
Sbjct: 84  MASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVMTRNPVFVLADTLA 143

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 144 VEALQKMVQGKFRHLPVVENGE----VIAILDIAK 174


>gi|167749032|ref|ZP_02421159.1| hypothetical protein ANACAC_03813 [Anaerostipes caccae DSM 14662]
 gi|167651654|gb|EDR95783.1| hypothetical protein ANACAC_03813 [Anaerostipes caccae DSM 14662]
          Length = 393

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 7/87 (8%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+    + VVDE +KL+G+I    ++R  N      T+   DV+  +P    +D +L 
Sbjct: 274 MKERHVDTLLVVDENRKLQGMINRKALYRAKNPLAAAETMMKTDVLTASP----DDNILQ 329

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + ++L+ ++++  + VVD+ +K +G++
Sbjct: 330 L-LKLIDEYDVGNIPVVDENEKVLGLI 355


>gi|162456297|ref|YP_001618664.1| CBS domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161166879|emb|CAN98184.1| predicted CBS domain [Sorangium cellulosum 'So ce 56']
          Length = 306

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 31/104 (29%), Positives = 51/104 (49%), Gaps = 5/104 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVMIKNPKVIL 297
           DA+  + +   G V V D GQ+L GI+T+ DI       DL+  S  + D+M      + 
Sbjct: 22  DAVRAMMDNHVGAVLVHD-GQRLAGIVTDRDIALEIVAGDLDARSTMLRDIMSDEIATLE 80

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            D  +  A++ +R H    + V +   + +G+V   DLL  G+I
Sbjct: 81  LDASIDDAVRTMRDHACRRVPVTEQG-RPVGLVTLDDLLADGVI 123


>gi|320538309|ref|ZP_08038190.1| CBS domain pair [Treponema phagedenis F0421]
 gi|320144808|gb|EFW36543.1| CBS domain pair [Treponema phagedenis F0421]
          Length = 214

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 13/112 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDLNTLSVEDV 288
           DA+  L ++  G V V+D+   L GIITE D+                +  L+ L VE V
Sbjct: 24  DALAFLKKEGIGRVPVLDQRNHLIGIITERDLLNASPSSATALDIYEINYLLSKLKVEKV 83

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M ++   I ED  +  A +++  + +S L V+      +GIV   DL +  I
Sbjct: 84  MKRDVITITEDVAVEEAARIMVDNKVSALPVM-RGDALVGIVSDGDLFKLFI 134


>gi|303242637|ref|ZP_07329112.1| CBS domain containing membrane protein [Acetivibrio cellulolyticus
           CD2]
 gi|302589845|gb|EFL59618.1| CBS domain containing membrane protein [Acetivibrio cellulolyticus
           CD2]
          Length = 149

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 29/121 (23%), Positives = 58/121 (47%), Gaps = 28/121 (23%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------------RNFHKDL 280
           +LSEK    V V+D+  K+ G+++E D+                         + ++++L
Sbjct: 26  LLSEKNISGVPVLDDSSKVIGMVSEKDLLYKDIEPHFPPVVEILGGLIFLKSVKQYNEEL 85

Query: 281 NTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L     E++M K    I  DT +    +L+ + +I+ + VVD+ QK +GI+   D+++
Sbjct: 86  RKLVATRAEEIMTKKVVTIGPDTEVERIAELMIEKDINRIPVVDN-QKLVGIISRADVIK 144

Query: 338 F 338
           +
Sbjct: 145 Y 145


>gi|229086549|ref|ZP_04218720.1| CBS domain containing protein [Bacillus cereus Rock3-44]
 gi|228696759|gb|EEL49573.1| CBS domain containing protein [Bacillus cereus Rock3-44]
          Length = 147

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
           V   D+M S + +  V+IG  L  A+ +L +  +  + V+D   KL G+I+   I     
Sbjct: 12  VLVKDLMISSEKVAHVQIGNSLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 71

Query: 274 ---RNFHKDLNTLSVEDVMIKN-PKVILEDTL 301
              R   + L  + VE+VM K+ P + LED+ 
Sbjct: 72  GLERIEFEKLEDMKVENVMKKDIPHLELEDSF 103


>gi|125528914|gb|EAY77028.1| hypothetical protein OsI_04983 [Oryza sativa Indica Group]
 gi|125573153|gb|EAZ14668.1| hypothetical protein OsJ_04591 [Oryza sativa Japonica Group]
          Length = 497

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLL 302
           ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  +L DTL 
Sbjct: 31  MAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLSDTLA 90

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 91  VEALQKMVQGKFRHLPVVENGE----VIALLDIAK 121


>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
 gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
          Length = 159

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------------- 284
           +ID + +   K+     VVD   +L GIIT GDI    +K +                  
Sbjct: 20  VIDLLRLFERKKITGAPVVDNCNRLVGIITVGDILGRIYKPVPLFDIMYYVAVLDTDAIV 79

Query: 285 -----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      V ++M +    + EDT      +++ +H    L VVD   K IG++   
Sbjct: 80  NGEIYDVLGKLVSELMTRKVITVSEDTEFADVAKIMSRHRFKKLPVVDSSNKLIGVISRG 139

Query: 334 DLLRFGI 340
           +++R+ I
Sbjct: 140 EIVRYFI 146


>gi|90021106|ref|YP_526933.1| inosine-5'-monophosphate dehydrogenase [Saccharophagus degradans
           2-40]
 gi|89950706|gb|ABD80721.1| inosine-5'-monophosphate dehydrogenase [Saccharophagus degradans
           2-40]
          Length = 556

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 6/101 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           C + D I +  +     V V+D G  L GI+T  D+   F  +L+  +V  +M    K++
Sbjct: 169 CSIKDLIALTRQHNISGVPVLDNGD-LVGIVTGRDV--RFETNLDA-TVASIMTPKEKLV 224

Query: 297 --LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             LE T       LL +H I  ++VV+D  K  G++   D+
Sbjct: 225 TVLEGTAADEVRALLHKHRIEKVLVVNDKFKLCGLITVKDI 265


>gi|49477583|ref|YP_036378.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49329139|gb|AAT59785.1| transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar konkukian str. 97-27]
          Length = 129

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS   L   L  A+     +IAITS  KS ++   DI L T  +E
Sbjct: 21  GLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRE 80

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 81  TEFRTE---ASSSRLAQLSLIDTLYVGL 105


>gi|78044517|ref|YP_360829.1| glucosamine--fructose-6-phosphate aminotransferase
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77996632|gb|ABB15531.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Carboxydothermus hydrogenoformans Z-2901]
          Length = 609

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 17/163 (10%)

Query: 27  ALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKL 82
           ALR  +A +    +LE  L + E + +F+ ++        R+ I+  G + H   +G  L
Sbjct: 262 ALRDTLAGRLDAENLEVKLPEIEENLEFYKSL-------NRIFISACGTAYHAGLVGKYL 314

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
              L     P     A+E  + D  +I R+DL++V+S SG + +  A L  A++    ++
Sbjct: 315 LEKLVRI--PVEVDVASEFRYRD-PLIGRNDLLVVISQSGETADTLAALREAKKRGARVL 371

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           A+T+   S V+  AD V+     PE     +A T +   QL +
Sbjct: 372 AVTNVVGSSVSREADDVIYTWAGPEIA---VASTKAYTTQLLV 411


>gi|121728012|ref|ZP_01681051.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674553|ref|YP_001218463.1| hypothetical protein VC0395_A2584 [Vibrio cholerae O395]
 gi|262167377|ref|ZP_06035085.1| transcriptional regulator RpiR family [Vibrio cholerae RC27]
 gi|121629715|gb|EAX62134.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316436|gb|ABQ20975.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227012051|gb|ACP08261.1| Putative HTH-type transcriptional regulator yfeT [Vibrio cholerae
           O395]
 gi|262024179|gb|EEY42872.1| transcriptional regulator RpiR family [Vibrio cholerae RC27]
          Length = 282

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I GIG S  +   LA  L   G  +     +         +   D++I +S+SG   
Sbjct: 134 RVQIIGIGGSALVAKDLAFKLLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLA 184
           E+      A++    +IA+T+ NK+ +   AD+ L T+  E +     +A  T+   Q  
Sbjct: 194 EILIAAEAAKQQGAKVIALTTPNKNRLREIADLALDTIADETQHRSSAIASRTA---QNV 250

Query: 185 IGDALAIALLESRNFS 200
           + D + + L + R  S
Sbjct: 251 LTDLIFLTLTQQRETS 266


>gi|108803642|ref|YP_643579.1| glutamine--fructose-6-phosphate transaminase [Rubrobacter
           xylanophilus DSM 9941]
 gi|108764885|gb|ABG03767.1| glutamine--fructose-6-phosphate transaminase [Rubrobacter
           xylanophilus DSM 9941]
          Length = 612

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 31/56 (55%)

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           D L++ +S SG + +  A +  ARRF   ++AIT+   S++   AD VL     PE
Sbjct: 343 DTLVVAISQSGETIDTLAAIQAARRFGGRVLAITNTRGSLITREADAVLLTSAGPE 398


>gi|30260962|ref|NP_843339.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           Ames]
 gi|47526110|ref|YP_017459.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49183806|ref|YP_027058.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           Sterne]
 gi|65318241|ref|ZP_00391200.1| COG1737: Transcriptional regulators [Bacillus anthracis str. A2012]
 gi|165873174|ref|ZP_02217788.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0488]
 gi|167636628|ref|ZP_02394920.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0442]
 gi|167641911|ref|ZP_02400148.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0193]
 gi|170689607|ref|ZP_02880791.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0465]
 gi|170709305|ref|ZP_02899722.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0389]
 gi|177655809|ref|ZP_02937051.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0174]
 gi|190568801|ref|ZP_03021704.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035199|ref|ZP_03102605.1| putative transcriptional regulator, RpiR family [Bacillus cereus W]
 gi|196037596|ref|ZP_03104907.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           NVH0597-99]
 gi|196046761|ref|ZP_03113984.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB108]
 gi|218902035|ref|YP_002449869.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH820]
 gi|225862796|ref|YP_002748174.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB102]
 gi|227816307|ref|YP_002816316.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. CDC 684]
 gi|228925995|ref|ZP_04089076.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944564|ref|ZP_04106934.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228984013|ref|ZP_04144202.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229028617|ref|ZP_04184733.1| Transcriptional regulator, RpiR [Bacillus cereus AH1271]
 gi|229120456|ref|ZP_04249703.1| Transcriptional regulator, RpiR [Bacillus cereus 95/8201]
 gi|229154530|ref|ZP_04282647.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 4342]
 gi|229603953|ref|YP_002865403.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0248]
 gi|254682980|ref|ZP_05146841.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254725767|ref|ZP_05187549.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. A1055]
 gi|254735129|ref|ZP_05192840.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254739959|ref|ZP_05197651.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Kruger B]
 gi|254753298|ref|ZP_05205334.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Vollum]
 gi|254757212|ref|ZP_05209240.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Australia 94]
 gi|30254411|gb|AAP24825.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. Ames]
 gi|47501258|gb|AAT29934.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177733|gb|AAT53109.1| transcriptional regulator, RpiR family, putative [Bacillus
           anthracis str. Sterne]
 gi|164711085|gb|EDR16648.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0488]
 gi|167510112|gb|EDR85521.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0193]
 gi|167527960|gb|EDR90770.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0442]
 gi|170125773|gb|EDS94683.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0389]
 gi|170666451|gb|EDT17230.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0465]
 gi|172079972|gb|EDT65075.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0174]
 gi|190560038|gb|EDV14020.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992263|gb|EDX56225.1| putative transcriptional regulator, RpiR family [Bacillus cereus W]
 gi|196022473|gb|EDX61157.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB108]
 gi|196031838|gb|EDX70434.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           NVH0597-99]
 gi|218539126|gb|ACK91524.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH820]
 gi|225787970|gb|ACO28187.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB102]
 gi|227003467|gb|ACP13210.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. CDC 684]
 gi|228628928|gb|EEK85638.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 4342]
 gi|228663041|gb|EEL18634.1| Transcriptional regulator, RpiR [Bacillus cereus 95/8201]
 gi|228732738|gb|EEL83604.1| Transcriptional regulator, RpiR [Bacillus cereus AH1271]
 gi|228775693|gb|EEM24070.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228815024|gb|EEM61275.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228833707|gb|EEM79263.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229268361|gb|ACQ49998.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0248]
          Length = 287

 Score = 36.2 bits (82), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|322389752|ref|ZP_08063299.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
 gi|321143591|gb|EFX39022.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
          Length = 212

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNPKVI--L 297
           DAI  L       + V+DEG+ L GI++  D+ R + +  + T  V   M + P +I   
Sbjct: 95  DAIITLFMYDADVLYVIDEGKLLLGIMSRKDLLRASLNSSIQTTPVAVCMTRMPHIITCT 154

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRFGII 341
           +D  +  A  LL+ H I  L VVD+   +K +G V    LL + I+
Sbjct: 155 KDMNILEAAALLQDHAIDSLPVVDEENDRKIVGTVTKSALLDYIIL 200


>gi|299482800|gb|ADJ19210.1| Elg6 [Escherichia coli]
          Length = 352

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L+     +++A+ I++ +      VV+E   L G+IT+GDI R   K+L  T  V  VM 
Sbjct: 9   LISPDSSILEALEIINNEALRVALVVNENNTLLGVITDGDIRRGILKNLPLTAEVHQVMN 68

Query: 291 KNP 293
           K P
Sbjct: 69  KKP 71


>gi|261350089|ref|ZP_05975506.1| inosine-5-monophosphate dehydrogenase related protein I
           [Methanobrevibacter smithii DSM 2374]
 gi|288860875|gb|EFC93173.1| inosine-5-monophosphate dehydrogenase related protein I
           [Methanobrevibacter smithii DSM 2374]
          Length = 272

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 18/151 (11%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S+ DF  L  G     + V   +VM   D I  V     L+ A  I+ +   G + V+D 
Sbjct: 122 SKADFVTLAVGRAFDKITV--KEVM--SDDIKAVSSQERLVHARRIMIDSHVGRLPVID- 176

Query: 260 GQKLKGIITEGDI---FRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           G +L G++T  D+   F NF K+         +  + VE+VM  NP  I +D  ++    
Sbjct: 177 GDELVGMMTSKDVMKAFINFRKNVPEKYQKTQIKEILVEEVMSDNPLSISKDASISEVAN 236

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     + L VV+D    IGI+   D+LR 
Sbjct: 237 TMMDTGYNGLPVVED-NNVIGIITQTDILRL 266


>gi|218903408|ref|YP_002451242.1| transcriptional regulator, RpiR family [Bacillus cereus AH820]
 gi|228945887|ref|ZP_04108230.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229121821|ref|ZP_04251041.1| RpiR family transcriptional regulator [Bacillus cereus 95/8201]
 gi|218535544|gb|ACK87942.1| transcriptional regulator, RpiR family [Bacillus cereus AH820]
 gi|228661610|gb|EEL17230.1| RpiR family transcriptional regulator [Bacillus cereus 95/8201]
 gi|228813761|gb|EEM60039.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
          Length = 112

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKE 165
           G+++++ ++I +S SGS   L   L  A+     +IAITS  KS ++   DI L T  +E
Sbjct: 4   GLLSKNSVVIGISHSGSDKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRE 63

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIAL 193
            E        ++S + QL++ D L + L
Sbjct: 64  TEFRTE---ASSSRLAQLSLIDTLYVGL 88


>gi|118476479|ref|YP_893630.1| RpiR family transcriptional regulator [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415704|gb|ABK84123.1| transcriptional regulator, RpiR family [Bacillus thuringiensis str.
           Al Hakam]
          Length = 287

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|57641121|ref|YP_183599.1| hypothetical protein TK1186 [Thermococcus kodakarensis KOD1]
 gi|57159445|dbj|BAD85375.1| hypothetical protein, conserved, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 391

 Score = 36.2 bits (82), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 15/110 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---------------TLSVE 286
           A+ ++ +     + +V++  KL+G++T  D+   F K                  ++ + 
Sbjct: 152 ALAVMRDHAISRIPIVNDEGKLEGLVTLHDLIIRFIKPRFRAQAGEVAGEKIPPFSMPLR 211

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DVMI+    IL D  +  A+  ++ ++I  L+VV++  K +GI+   DLL
Sbjct: 212 DVMIRGVITILPDATVREAVATMKDNDIDGLVVVNEDNKVVGILTVKDLL 261


>gi|332532703|ref|ZP_08408579.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037919|gb|EGI74368.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 489

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           + DAI +  EK F    V D    L GI+T  D+   F   L    V  VM K  K++  
Sbjct: 106 IADAIELSHEKGFSGFPVTDSNNVLVGIVTSRDM--RFETKLEQ-PVSTVMTKKEKLVTV 162

Query: 298 -EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E       + L+ +H I  ++VVDD  K  G++   D  +
Sbjct: 163 KEGAAREEILGLMHEHRIEKILVVDDEFKLKGMITVKDYQK 203


>gi|302783404|ref|XP_002973475.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
 gi|300159228|gb|EFJ25849.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
          Length = 545

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-----IFRNFHKDLNTLSVEDVMI 290
           G  + DA   +  +R     + D    L GIIT+ D     I  N   D  TL V  VM 
Sbjct: 57  GTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPD-ETL-VSKVMT 114

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           KNP  ++ D L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 115 KNPVFVMSDALAVDALQKMVQGKFRHLPVVENGE----VIALLDITK 157


>gi|269120462|ref|YP_003308639.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
 gi|268614340|gb|ACZ08708.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
          Length = 186

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 65/150 (43%), Gaps = 12/150 (8%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G G+SG      A+ L   G   FFV            I  +DL+I+ S SG + 
Sbjct: 38  RIFIAGAGRSGFAARAFANRLMHLGLTVFFVGETTTPS-----IQANDLLIIGSGSGETG 92

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP-----KEPESCPHGLAPTTSAI 180
            L  +   A   +  +  IT   ++ +   + + + LP      + +S    + P  S+ 
Sbjct: 93  SLVTMANKASGQNASVATITIYPQATIGALSKVTVKLPGSTNKSDIDSGKVSIQPMGSSF 152

Query: 181 MQLA--IGDALAIALLESRNFSENDFYVLH 208
            QL+  + D+L + L++  N + ++ +  H
Sbjct: 153 EQLSLLVYDSLIMILMKKLNKTGDEMFKNH 182


>gi|221195977|ref|ZP_03569024.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
 gi|221202650|ref|ZP_03575669.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2]
 gi|221176584|gb|EEE09012.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2]
 gi|221182531|gb|EEE14931.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
          Length = 310

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 6/91 (6%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +T  D ++V+S+   + E   I   A R   P IAIT    S +A  A ++ T+P+E  S
Sbjct: 199 MTEQDALVVISFRHYAKEAVMISEVAARVGTPAIAITDSQLSPLAKDATVLFTIPEEEYS 258

Query: 169 CPHGLAPTTSAIMQLA--IGDALAIALLESR 197
               LA    A M LA  IG +LA  L   R
Sbjct: 259 FSRSLA----APMCLAQCIGISLAALLQPDR 285


>gi|49487231|ref|YP_044452.1| putative glycine betaine/carnitine/choline transport ATP-binding
           protein [Staphylococcus aureus subsp. aureus MSSA476]
 gi|49245674|emb|CAG44153.1| putative glycine betaine/carnitine/choline transport ATP-binding
           protein [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 408

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     ++ D+M 
Sbjct: 261 IQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGIRGHK-----TLRDMMQ 315

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++
Sbjct: 316 QHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLI 355


>gi|46200940|ref|ZP_00056065.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 113

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           L +A ++L EK  G +   D    + GI++E DI R+F +   D+ ++SV D M ++   
Sbjct: 7   LREAASLLLEKNIGALICSDRAGGIVGILSERDISRSFARLGADIISMSVSDAMTRDVIA 66

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              D  +   ++++ +     + VV D  + +G+V   DL++
Sbjct: 67  CSADDGVAEILEIMTETRCRHIPVVGD-GELLGLVSIGDLVK 107


>gi|330835694|ref|YP_004410422.1| hexulose-6-phosphate isomerase [Metallosphaera cuprina Ar-4]
 gi|329567833|gb|AEB95938.1| hexulose-6-phosphate isomerase [Metallosphaera cuprina Ar-4]
          Length = 194

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 5/99 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V++ G G+SG +G   A  L   G  ++ +         +  I  +DL I +S SG +
Sbjct: 36  GKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVL-----GETIVPAIRENDLAIAISGSGRT 90

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
             +      AR     LIA+TS   S +   AD+V+ +P
Sbjct: 91  KLIVTAAEAARDAKARLIALTSYQDSPLGKLADVVVEIP 129


>gi|307544108|ref|YP_003896587.1| RpiR family transcriptional regulator [Halomonas elongata DSM 2581]
 gi|307216132|emb|CBV41402.1| transcriptional regulator, RpiR family [Halomonas elongata DSM
           2581]
          Length = 287

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 46/83 (55%), Gaps = 5/83 (6%)

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL-PKEPESCP 170
           DD+++ LS SG + E+      AR++   ++AIT+ N S +A  AD+VL +  +E +   
Sbjct: 176 DDVVVTLSVSGYTPEIVESAQIARQYGARVVAITA-NGSPLAETADVVLPVAARETDFIY 234

Query: 171 HGLAPTTSAIMQLAIGDALAIAL 193
           H   P+ S    LA  D LA+ L
Sbjct: 235 H---PSASRYAVLAAIDVLALEL 254


>gi|255003429|ref|ZP_05278393.1| glucosamine--fructose-6-phosphate aminotransferase (glmS)
           [Anaplasma marginale str. Puerto Rico]
          Length = 604

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 35/273 (12%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S +F C  +  K++   + I G G S   G      L S       +  A         I
Sbjct: 276 SVEFACNADLFKSLT-HLTIVGSGSSYMAGLIAKYWLESIANIRVLLSIASEFRYHRMQI 334

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           + +D+ + +S SG + +  A L +ARR    +I++T+  ++ +   +DI L +   PE  
Sbjct: 335 SENDVFLFISQSGETADTLAALRHARRQHSTVISLTNVPRNSMESISDIALKILAGPEV- 393

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY----------VLHPGGKLGT-LFV 218
             G+A T +   QLA+    ++ L + R       Y            H    LGT +  
Sbjct: 394 --GVASTKTFSAQLAVLACFSLWLAKVRCVIAQSTYEQLLEALQCVAQHASEALGTSIES 451

Query: 219 CASDVMHSGDSIPLVKIGC--------------PLIDAITILS-EKRFGCVAVVDEGQKL 263
            A+ ++H    I + +  C                I  I I S E + G +A+VDE   +
Sbjct: 452 VANLILHYNRVIIMGRGTCYGVALEAALKIRELSYIHTIGIASGELKHGSIALVDESLPV 511

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             I    + F       N +S+++V  +   V+
Sbjct: 512 IAIAPYNETFTK-----NLVSIQEVSARKGIVV 539


>gi|171184891|ref|YP_001793810.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934103|gb|ACB39364.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 130

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPK 294
           L++    L+    G + VV+    +K  GIITE D+ R  + H  L+T  VE     +  
Sbjct: 25  LVEVAEKLATNNIGALVVVNPQNTKKPVGIITERDVVRAISMHMPLST-PVEAFASTDLI 83

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I ED  +  A +L+ ++NI  L+VV+   +  G+V   D+LR
Sbjct: 84  TIDEDEPVGKAAELMLKYNIRHLIVVNKFGELRGVVSIRDVLR 126


>gi|149183232|ref|ZP_01861677.1| hypothetical protein BSG1_17271 [Bacillus sp. SG-1]
 gi|148849065|gb|EDL63270.1| hypothetical protein BSG1_17271 [Bacillus sp. SG-1]
          Length = 143

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVI 296
           +ID   ++ +   G + V  E  +LKGI+T+ DI  +    K      V+++M +N   +
Sbjct: 21  IIDVAKLMKDLDVGAIPVS-ENNELKGILTDRDIVIHGLAEKGSADFQVKEIMTENVDYV 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             DT +  A   + +  I  L V+D   + +GIV   DL
Sbjct: 80  KPDTDINEAYTTMAEKQIRRLPVLDQNNQVVGIVSLGDL 118


>gi|83590524|ref|YP_430533.1| glycine betaine/L-proline transport ATP binding subunit [Moorella
           thermoacetica ATCC 39073]
 gi|83573438|gb|ABC19990.1| glycine betaine/L-proline transport ATP binding subunit [Moorella
           thermoacetica ATCC 39073]
          Length = 376

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 21/90 (23%), Positives = 44/90 (48%), Gaps = 3/90 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + +  +  K+   + V DE  +L G ++  ++ RN+ +      V+D+M ++  V+ E T
Sbjct: 270 EGVATMRRKKVDTLLVTDESGRLLGAVSIEELNRNYQR---AHQVQDLMARDVPVVFEGT 326

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               A  L+ +  +  L V+D   +  G+V
Sbjct: 327 PAREAFDLITRERLEYLPVIDKEGRLKGLV 356


>gi|42779988|ref|NP_977235.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10987]
 gi|52144508|ref|YP_082321.1| RpiR family transcriptional regulator [Bacillus cereus E33L]
 gi|229089877|ref|ZP_04221132.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-42]
 gi|229183152|ref|ZP_04310382.1| Transcriptional regulator, RpiR [Bacillus cereus BGSC 6E1]
 gi|42735906|gb|AAS39843.1| transcriptional regulator, RpiR family, putative [Bacillus cereus
           ATCC 10987]
 gi|51977977|gb|AAU19527.1| transcriptional regulator, RpiR family [Bacillus cereus E33L]
 gi|228600291|gb|EEK57881.1| Transcriptional regulator, RpiR [Bacillus cereus BGSC 6E1]
 gi|228693502|gb|EEL47208.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-42]
 gi|324324867|gb|ADY20127.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 287

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|21284101|ref|NP_647189.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus MW2]
 gi|21205544|dbj|BAB96237.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus MW2]
          Length = 410

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 52/100 (52%), Gaps = 7/100 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    L DA+ I+ +KR   + VVD    L G +   DI +    HK     ++ D+M 
Sbjct: 263 IQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGIRGHK-----TLRDMMQ 317

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++
Sbjct: 318 QHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLI 357


>gi|150016401|ref|YP_001308655.1| hypothetical protein [Clostridium beijerinckii NCIMB 8052]
 gi|149902866|gb|ABR33699.1| CBS domain containing protein [Clostridium beijerinckii NCIMB 8052]
          Length = 154

 Score = 36.2 bits (82), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 36/129 (27%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------------------- 277
           D + +L   + G V +VD    L GI+++GDI R+ +                       
Sbjct: 22  DVMRVLVTNKIGGVPIVDNKGILSGIVSDGDIIRSINPKEGKMYDLISYVFYLKKEELEE 81

Query: 278 -----KDLNTLSV---EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                KD N +++   +D+    P    EDT+  V + +  +HN   + V+D  ++ +G+
Sbjct: 82  EIGIIKDTNIMTIAKCKDIFCVFP----EDTMEKV-LSIFSKHNFKKIPVIDKERRVVGV 136

Query: 330 VHFLDLLRF 338
           +   D++R+
Sbjct: 137 ISRGDVIRY 145


>gi|332982740|ref|YP_004464181.1| glycine betaine/L-proline ABC transporter ATPase [Mahella
           australiensis 50-1 BON]
 gi|332700418|gb|AEE97359.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Mahella
           australiensis 50-1 BON]
          Length = 372

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/48 (35%), Positives = 29/48 (60%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +  ED+MI NP     +  LT A++++   ++  L++VDD  K +GIV
Sbjct: 248 IKAEDIMITNPVKATPNRTLTQALEIMSSSSVDSLIIVDDKNKLLGIV 295


>gi|332662181|ref|YP_004444969.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 144

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKV 295
           +IDA+ ++S++  G V V+DE Q L GI +E D  R      +   +  V +VM  N   
Sbjct: 25  VIDALALMSQQGIGAVLVMDEDQ-LIGIFSERDYARKGIIVGRKAKSTPVTEVMTANVFT 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  D  +   M L  +  I  L V+++ QK IG++   D++
Sbjct: 84  VSPDMDIEDCMTLFSEKRIRHLPVMEN-QKVIGMLSIGDIV 123


>gi|331664128|ref|ZP_08365038.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA143]
 gi|331059927|gb|EGI31904.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA143]
          Length = 306

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|269958515|ref|YP_003328302.1| D-fructose-6-phosphate amidotransferase [Anaplasma centrale str.
           Israel]
 gi|269848344|gb|ACZ48988.1| D-fructose-6-phosphate amidotransferase [Anaplasma centrale str.
           Israel]
          Length = 604

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 62/273 (22%), Positives = 108/273 (39%), Gaps = 35/273 (12%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S +F C  +  K++   + I G G S   G      L S       +  A         I
Sbjct: 276 SVEFACNADLFKSLT-HLTIVGSGSSYMAGLIAKYWLESIANIRVLLSIASEFRYHRMQI 334

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           + +D+ + +S SG + +  A L +ARR    +I++T+  ++ +   +DI L +   PE  
Sbjct: 335 SENDVFLFISQSGETADTLAALRHARRQHSTVISLTNVPRNSMESISDIALKILAGPEV- 393

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY----------VLHPGGKLGT-LFV 218
             G+A T +   QLA+    ++ L + R       Y            H    LGT +  
Sbjct: 394 --GVASTKTFSAQLAVLACFSLWLAKVRCVIAQSTYEQLLEALQCVAQHASEALGTSIES 451

Query: 219 CASDVMHSGDSIPLVKIGC--------------PLIDAITILS-EKRFGCVAVVDEGQKL 263
            A+ ++H    I + +  C                I  I I S E + G +A+VDE   +
Sbjct: 452 VANLILHYNRVIIMGRGTCYGVALEAALKIRELSYIHTIGIASGELKHGSIALVDESLPV 511

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             I    + F       N +S+++V  +   V+
Sbjct: 512 IAIAPYNETFTK-----NLVSIQEVSARKGIVV 539


>gi|269127025|ref|YP_003300395.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
 gi|268311983|gb|ACY98357.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
          Length = 201

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 25/39 (64%)

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +  A+++L +HNI+   VVDD    +GIV  +DLLR
Sbjct: 17  DATVRQAIRVLYEHNITAAPVVDDSGAMVGIVSEMDLLR 55


>gi|225849322|ref|YP_002729486.1| magnesium transporter [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643176|gb|ACN98226.1| magnesium transporter [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 456

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 6/84 (7%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQH 312
           + VVDE  KL G+I+  D+        + L ++D+M ++   + +EDT    A++  R++
Sbjct: 173 IYVVDEKNKLVGVISLKDLLTY----PSNLMIKDIMKRDLITLNIEDTK-EEAIENFRRY 227

Query: 313 NISVLMVVDDCQKAIGIVHFLDLL 336
           ++ VL VVDD    +G+V+  D+L
Sbjct: 228 DLYVLPVVDDEGTLLGVVYIEDIL 251


>gi|261408311|ref|YP_003244552.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Paenibacillus sp. Y412MC10]
 gi|329922931|ref|ZP_08278447.1| choline ABC transporter, ATP-binding protein OpuBA [Paenibacillus
           sp. HGF5]
 gi|261284774|gb|ACX66745.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Paenibacillus sp. Y412MC10]
 gi|328941704|gb|EGG37989.1| choline ABC transporter, ATP-binding protein OpuBA [Paenibacillus
           sp. HGF5]
          Length = 387

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 16/142 (11%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDS---IPLVK---IGCP--------LIDAITILSE 248
           D  + HP       F+ +  + +  +S   IPLV    I  P        L +AI ++  
Sbjct: 222 DSILRHPANDFVRDFIGSKRLQNENESAYEIPLVDEVMITNPVTAFPSRGLAEAIKMMEM 281

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           KR   + +VD  ++L+G ++   +   + ++  T  V DVM      +   + L  A+++
Sbjct: 282 KRVDSLLIVDRNRQLQGAVSIYRVLDQYGEEGKT--VADVMHPVRFSVASGSTLPQAIEI 339

Query: 309 LRQHNISVLMVVDDCQKAIGIV 330
           +  H +S L VVD   + +G++
Sbjct: 340 MDSHQLSNLPVVDSNNRFLGLI 361


>gi|73668502|ref|YP_304517.1| hypothetical protein Mbar_A0965 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395664|gb|AAZ69937.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 271

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 18/56 (32%), Positives = 33/56 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V ++M   P  I E   +T A QL+R + +  L+VVD+  + +G++   D+LR 
Sbjct: 1   MNVSEIMTDEPVSIKEREFVTRARQLMRDYLLRSLVVVDEENRLVGMLSDQDILRI 56


>gi|329668048|gb|AEB93996.1| transcriptional regulator [Lactobacillus johnsonii DPC 6026]
          Length = 283

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 44/95 (46%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G SG     L      +     F      +   +      D++++ S+SG + 
Sbjct: 131 RIYLAGVGASGLPAQDLYYKFIRSDKNVIFNQDIHIALERICYSHSTDVLVIFSYSGLTQ 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           E+  +   AR+   P+IAIT  ++S +   +D+VL
Sbjct: 191 EILLLAEQARKNHTPIIAITRSHQSPLVEISDVVL 225


>gi|319940194|ref|ZP_08014547.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           1_2_62CV]
 gi|319810665|gb|EFW06995.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           1_2_62CV]
          Length = 493

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 4/97 (4%)

Query: 241 DAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           DA  ++   R   V VV+  E +KL GIIT  D+   F  D N      +  KN      
Sbjct: 112 DAEELMERYRISGVPVVETLENRKLVGIITNRDM--RFITDYNQPISAHMTSKNLITAPV 169

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 170 GTDLETAERILHEHRIEKLPLVDDYGRLSGLITIKDI 206


>gi|302408497|ref|XP_003002083.1| nuclear protein SNF4 [Verticillium albo-atrum VaMs.102]
 gi|261359004|gb|EEY21432.1| nuclear protein SNF4 [Verticillium albo-atrum VaMs.102]
          Length = 423

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 55/111 (49%), Gaps = 13/111 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPK 294
           ++D ++++ +    CV +VD+  +L  +    DI        + DL++ SV + + K P 
Sbjct: 304 VLDVVSLMVKHDISCVPLVDKHNRLLNVFEAVDIIPCIKGGAYDDLSS-SVGEALCKRPD 362

Query: 295 VIL-------EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     ED L ++    +R+  +  L+VVDD  + +GI+   D+L++
Sbjct: 363 DFPGIYTCGPEDRLDSI-FDTVRKSRVHRLIVVDDENRLVGIISLSDILKY 412


>gi|146313073|ref|YP_001178147.1| RpiR family transcriptional regulator [Enterobacter sp. 638]
 gi|145319949|gb|ABP62096.1| transcriptional regulator, RpiR family [Enterobacter sp. 638]
          Length = 295

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD-LGMITRDDLIIVLSWSGSS 124
           +V I GIG SG +    A   +  G P+  ++       + L  + R D++++++   + 
Sbjct: 143 QVAIFGIGASGVLAEYTARMFSRMGLPATALNRTGIGLAEQLIELQRGDVLVMMAQKSAH 202

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            E +  L  A+R  IP I +T+   S  +   ++V+ +P+  E
Sbjct: 203 REGQTTLREAKRLGIPAILLTNALDSRFSKEVNVVIHVPRGGE 245


>gi|88657908|ref|YP_507045.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|88599365|gb|ABD44834.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 485

 Score = 36.2 bits (82), Expect = 7.0,   Method: Compositional matrix adjust.
 Identities = 28/101 (27%), Positives = 56/101 (55%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           A++I+ E  +  + VV   + G+ L GI+T  D+   F ++ N   V D+M K+  + + 
Sbjct: 105 ALSIMQEYSYSGIPVVTDTENGKLLVGILTNRDV--RFVENKN-CKVSDIMTKDHLITVP 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  + A++LL Q+    L+VVD+    +G++   D+ +F
Sbjct: 162 EGIERSDAIKLLHQYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|284922511|emb|CBG35598.1| RpiR-family transcriptional regulator [Escherichia coli 042]
          Length = 306

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|288935665|ref|YP_003439724.1| hypothetical protein Kvar_2806 [Klebsiella variicola At-22]
 gi|290509692|ref|ZP_06549063.1| hypothetical protein HMPREF0485_01463 [Klebsiella sp. 1_1_55]
 gi|288890374|gb|ADC58692.1| conserved hypothetical protein [Klebsiella variicola At-22]
 gi|289779086|gb|EFD87083.1| hypothetical protein HMPREF0485_01463 [Klebsiella sp. 1_1_55]
          Length = 307

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 22/158 (13%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG------------TPSFFVHAAEASHGDLGMI--- 109
           GR+VI G G SG    +  S  +  G            T +       A++ DLG     
Sbjct: 65  GRLVIIGAGASGRTAIEAVSDYSPEGKHALVGLIAGGQTAAMAERETAANNYDLGAFELQ 124

Query: 110 ----TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
               +  D+++ L+ SG +  +   + +A     P+  +T +  S  A  ADI++     
Sbjct: 125 SLDFSNHDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVVTQQAASEAAQLADIIIAPQTG 184

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL--AIALLESRNFSE 201
           PE+   GLA   + + Q  I + L   +A+ + R +S 
Sbjct: 185 PEAVA-GLANPKAQLAQRQIVNMLTTGLAIRDGRVYSN 221


>gi|302875236|ref|YP_003843869.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
 gi|307687911|ref|ZP_07630357.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
 gi|302578093|gb|ADL52105.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
          Length = 351

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVDE   L   +T+GDI R   K  DLN   V+ +M + PK ++ +     A  +++Q+ 
Sbjct: 31  VVDESMALIATLTDGDIRRWILKNGDLNA-PVKTIMNREPKYLMSNEEYR-AKDVMQQYL 88

Query: 314 ISVLMVVDDCQKAIGIVHFLD 334
           I+ L +VD+ +  I +V + D
Sbjct: 89  ITALPIVDEKKVVIRVVFWND 109


>gi|226227857|ref|YP_002761963.1| inosine-5'-monophosphate dehydrogenase [Gemmatimonas aurantiaca
           T-27]
 gi|226091048|dbj|BAH39493.1| inosine-5'-monophosphate dehydrogenase [Gemmatimonas aurantiaca
           T-27]
          Length = 496

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L +A+ ++   +   V +VD   +L GI+T  D+   F +DL+   + DVM     +   
Sbjct: 118 LREAVALMMRFKISGVPIVDGAGQLVGILTNRDL--QFERDLDR-PLRDVMTGQGLITAP 174

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L +H I  L VVDD     G++   D+
Sbjct: 175 VGTTLDEAERILGKHRIEKLPVVDDHGTLKGLITVKDI 212


>gi|222150574|ref|YP_002559727.1| glucosamine-fructose-6-phosphate aminotransferase, isomerizing
           [Macrococcus caseolyticus JCSC5402]
 gi|222119696|dbj|BAH17031.1| glucosamine-fructose-6-phosphate aminotransferase, isomerizing
           [Macrococcus caseolyticus JCSC5402]
          Length = 600

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 23/181 (12%)

Query: 16  HSLMKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK--GRVVITGI 72
           H ++K    Q  A+R+II E +         +G L          +KA++   R+ I   
Sbjct: 250 HYMLKEINEQPAAMRNIIQEYQ-------DEKGNLKIDKDI----VKAVRKADRIHIIAC 298

Query: 73  GKS---GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           G S   G +G +     A  G P+  VH A     ++ ++++  L I +S SG + + +A
Sbjct: 299 GTSYNAGLVGKEYLEKWA--GIPTE-VHVASEFVYNMPLLSKKPLFIFISQSGETADSRA 355

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L   ++   P + IT+   S ++  AD  L L   PE     +A T +   Q+A+   L
Sbjct: 356 VLVETKKLGHPALTITNVAGSTLSREADHTLILHAGPEIA---VASTKAYTAQIAVLSIL 412

Query: 190 A 190
           A
Sbjct: 413 A 413


>gi|119897323|ref|YP_932536.1| hypothetical protein azo1032 [Azoarcus sp. BH72]
 gi|119669736|emb|CAL93649.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 149

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 11/105 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           L +A+TI++E+  G + V  +GQ + G++T  ++ +  HK      +L VE  M+K P  
Sbjct: 23  LAEAVTIMTEQDVGSLVVFAQGQ-MAGLLTFREVLQAVHKGGGGWESLPVETAMLKGPLT 81

Query: 296 ILEDTLLTVAMQLLRQHNI---SVLMVVDDCQKAIGIVHFLDLLR 337
                  T+ M  LR+  +      + V D    +G+V F D+ +
Sbjct: 82  AAP----TMEMDELRRLMVDRHQRYLPVMDGNTLLGVVSFHDVAK 122


>gi|52424829|ref|YP_087966.1| inositol-5-monophosphate dehydrogenase [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306881|gb|AAU37381.1| GuaB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 487

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLL 302
           ++ +  F    V+D+   L GIIT  D    F KDLN  +V +VM    K++   E    
Sbjct: 112 LVKKNGFAGYPVIDQNDNLVGIITARDT--RFVKDLNK-TVAEVMTPKEKLVTVKEGAKR 168

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + L+  H +  ++VVDD  K  G++   D  +
Sbjct: 169 EDIIALMHSHRVEKVLVVDDNFKLKGMITVKDFQK 203


>gi|331674010|ref|ZP_08374773.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
 gi|26109332|gb|AAN81534.1|AE016764_216 Hypothetical protein yfhH [Escherichia coli CFT073]
 gi|331069283|gb|EGI40675.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
          Length = 306

 Score = 36.2 bits (82), Expect = 7.1,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|317472569|ref|ZP_07931888.1| glycine betaine/L-proline transport ATP binding subunit protein
           [Anaerostipes sp. 3_2_56FAA]
 gi|316899978|gb|EFV21973.1| glycine betaine/L-proline transport ATP binding subunit protein
           [Anaerostipes sp. 3_2_56FAA]
          Length = 393

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 23/87 (26%), Positives = 50/87 (57%), Gaps = 7/87 (8%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+    + VVDE +KL+G+I    ++R  N      T+   DV+  +P    +D +L 
Sbjct: 274 MKERHVDTLLVVDENRKLQGMINRKALYRAKNPLAAAETMMKTDVLTASP----DDNILQ 329

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + ++L+ ++++  + VVD+ +K +G++
Sbjct: 330 L-LKLIDEYDVGNIPVVDENEKVLGLI 355


>gi|255632210|gb|ACU16463.1| unknown [Glycine max]
          Length = 228

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 29/148 (19%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D M   + + +VK    + +A+ IL E R     V+D+  KL G++++ D+         
Sbjct: 71  DFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSDYDLLALDSISGH 130

Query: 273 --------------FRNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                         ++ F++    LS      + ++M   P V+ E T L  A +LL + 
Sbjct: 131 GLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLEDAARLLLET 190

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               L VVD   + +GI+   +++R  +
Sbjct: 191 KFRRLPVVDAEGRLVGIITRGNVVRAAL 218


>gi|111025031|ref|YP_707451.1| hypothetical protein RHA1_ro08249 [Rhodococcus jostii RHA1]
 gi|110824010|gb|ABG99293.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 183

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 2/97 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A  +L+E  F  V VVD+  +L G++  GD+ R       T  V +VM            
Sbjct: 21  AAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAGQTCSET--VGEVMTAPAVAAPMYHY 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    Q+L Q  +  L VVD   + +GI+   D++R 
Sbjct: 79  LADVSQMLLQQGLRSLPVVDIDGRVVGILSRSDVVRL 115


>gi|108563240|ref|YP_627556.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori HPAG1]
 gi|107837013|gb|ABF84882.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori HPAG1]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|78043289|ref|YP_360854.1| CBS/cyclic nucleotide-binding domain-containing protein
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995404|gb|ABB14303.1| CBS/cyclic nucleotide-binding domain protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 631

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----LSVEDVMIKNPKVILED 299
            ++++ +   V +VD   +  GIITE D+ R    +  T    L   D+M KNP  I  D
Sbjct: 179 NLMAQHQVSSVVIVDNYNRPLGIITEHDLVRKVLAESKTPTDSLIALDIMNKNPATISPD 238

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +  +  + +  +  L+V ++ +  +GI+   DLL+
Sbjct: 239 AYYSQILLEMIKKQVRHLLVTEN-ETLLGIITLKDLLK 275


>gi|220930942|ref|YP_002507850.1| CBS domain containing protein [Halothermothrix orenii H 168]
 gi|219992252|gb|ACL68855.1| CBS domain containing protein [Halothermothrix orenii H 168]
          Length = 262

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           +++A  ++S    G + VV DEG  L GI+T+GD+      DLN   ++  M +    I 
Sbjct: 20  VVEAEKLMSINNIGRLIVVEDEG--LVGILTDGDLV--IQHDLNA-PIDKFMSREVITIS 74

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++  +  A ++L  H I  L V+D+  K +GIV   D++
Sbjct: 75  QNATVQEAAKVLSDHGIGGLPVLDEDGKLVGIVTADDIV 113


>gi|295702398|ref|YP_003595473.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus megaterium DSM 319]
 gi|294800057|gb|ADF37123.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus megaterium DSM 319]
          Length = 600

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S H   +G +   T A        VH A     ++ +++   L I +S SG
Sbjct: 292 RIYIVACGTSYHAGLVGKQFIETWAKVPVE---VHVASEFSYNMPLLSEKPLFIFISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L   +      + IT+   S ++  +D  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVQIKELGYKALTITNVPGSTLSRESDYTLLLHAGPEIA---VASTKAYTAQ 405

Query: 183 LAIGDALAIALLESR 197
           LA+   LA    ++R
Sbjct: 406 LAVLSILAAVTAKTR 420


>gi|323528540|ref|YP_004230692.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1001]
 gi|323385542|gb|ADX57632.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1001]
          Length = 388

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + F +  N L+ ED+M +    +   T    A  LL+++ +  L V+D+ +  +GIV  
Sbjct: 230 LQAFSRSFNELTCEDIMSRQVVSVSASTRAVAAWALLKRNKVKALPVIDEERTLVGIVTR 289

Query: 333 LDLL 336
            DL+
Sbjct: 290 ADLV 293


>gi|217967326|ref|YP_002352832.1| putative signal transduction protein with CBS domains [Dictyoglomus
           turgidum DSM 6724]
 gi|217336425|gb|ACK42218.1| putative signal transduction protein with CBS domains [Dictyoglomus
           turgidum DSM 6724]
          Length = 214

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 16/112 (14%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-------------IFRNFHKDLNTLSV 285
           +++A  I+ + +   + V+++G KL GI+TE D             IF   +  L  L V
Sbjct: 20  ILEAWKIMQDSQVRRLLVMEKG-KLVGIVTERDLRSVSPSQATSLSIFE-INYLLEKLKV 77

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D M  NP  +  D  +  A  ++R + IS L V+++  + +GI+   D+ R
Sbjct: 78  KDAMTPNPITVDADAPIEEAALIMRNNKISALPVIEN-DEVVGIITESDIFR 128


>gi|239826448|ref|YP_002949072.1| signal transduction protein with CBS domains [Geobacillus sp.
           WCH70]
 gi|239806741|gb|ACS23806.1| putative signal transduction protein with CBS domains [Geobacillus
           sp. WCH70]
          Length = 154

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 51/100 (51%), Gaps = 8/100 (8%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G  G   +  +  +   D +  V++G  L  A+ +L++  +  + V+D   KL G+I+  
Sbjct: 5   GNNGLAHMTVAQFLIPSDKVAHVQLGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMT 64

Query: 271 DIF-------RNFHKDLNTLSVEDVMIKN-PKVILEDTLL 302
            I        R   + L T+ VE+VM K+ P+++L+D +L
Sbjct: 65  MIMDAILGLERIEFERLETMKVEEVMNKDIPRLLLDDDVL 104


>gi|24380042|ref|NP_721997.1| putative acetoin utilization protein, acetoin dehydrogenase
           [Streptococcus mutans UA159]
 gi|24378033|gb|AAN59303.1|AE014996_6 putative acetoin utilization protein, acetoin dehydrogenase
           [Streptococcus mutans UA159]
          Length = 219

 Score = 36.2 bits (82), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 50/108 (46%), Gaps = 14/108 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVEDVM 289
           A  I+ EK    + V+ E   L G++TEG I                +  LN     DVM
Sbjct: 23  ATDIMREKNLRRLPVI-ENDVLVGLLTEGTIADANPSKATSLSIYEMNYLLNKTKARDVM 81

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           IK+   + +D  L  A+ ++ +H I VL VVD  Q + GI+   D+ R
Sbjct: 82  IKDVITVSKDDRLEDAIYIMMKHKIGVLPVVDGNQMS-GIITDKDVFR 128


>gi|254514040|ref|ZP_05126101.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
 gi|219676283|gb|EED32648.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
          Length = 621

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VEDVMIKNPKVILED 299
           A   ++E+R     V+ EG++L GI+T+ D+  R     LN  + V DVM  NP+ I   
Sbjct: 177 AARAMAERRVSSTFVL-EGEELLGILTDRDLRTRVLAAGLNNQTLVRDVMTPNPESISAQ 235

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L     L+ Q +   L V++D + A G+V   DL+
Sbjct: 236 ESLFATTLLMTQRSFHHLPVLEDGRLA-GVVTTSDLI 271


>gi|261405247|ref|YP_003241488.1| RpiR family transcriptional regulator [Paenibacillus sp. Y412MC10]
 gi|261281710|gb|ACX63681.1| transcriptional regulator, RpiR family [Paenibacillus sp. Y412MC10]
          Length = 289

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLGM 108
               AV+K+ A   +V + G+G SG     L   L   G     V A   SH       +
Sbjct: 128 NLRMAVDKLLA-ANKVYVYGVGSSGITALDLHYQLMRLG---LNVEAHRDSHIIAMSASL 183

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           + + DL+  +S SGS+ +L   +  A++    +I +T   +S +A +AD VL
Sbjct: 184 VKKGDLVFAISTSGSTRDLVDAVKEAKKNGADVICLTGHLRSPIATYADTVL 235


>gi|188527324|ref|YP_001910011.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Shi470]
 gi|188143564|gb|ACD47981.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori Shi470]
 gi|308063381|gb|ADO05268.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Sat464]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|154151258|ref|YP_001404876.1| inosine-5'-monophosphate dehydrogenase [Candidatus Methanoregula
           boonei 6A8]
 gi|153999810|gb|ABS56233.1| inosine-5'-monophosphate dehydrogenase [Methanoregula boonei 6A8]
          Length = 489

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 2/96 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA  ++++   G + VV +G K+ GI++  D+ R         S+  +M K P    ED 
Sbjct: 111 DAEKLMNQYSIGGLPVVGKG-KIIGIVSRRDV-RAIVSRCGEESIRTIMTKKPITASEDI 168

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               A++++  + +  L V D   +  GI+   D+L
Sbjct: 169 TPEKALEVMYTNKVERLPVADKIGRLTGIITMQDIL 204


>gi|327401879|ref|YP_004342718.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327317387|gb|AEA48003.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 388

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 4/74 (5%)

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL--LRQHNISVLMVVDD 322
           G+I   D       +   +   +VM  NP+VI  +   T A  L  +R H I  L+VVDD
Sbjct: 114 GVIYINDFLELVKPEFEGVKAREVM--NPEVITINEYETAAKALATMRNHGIDRLVVVDD 171

Query: 323 CQKAIGIVHFLDLL 336
             +A+GI+   D++
Sbjct: 172 SHRAVGIITGKDII 185


>gi|325685679|gb|EGD27759.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 415

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VE +M+KNP  I     L  A+ L+R+  +  L+V DD     G   F+DL   G
Sbjct: 256 TVEQIMLKNPAAITPGKSLAEAISLMRKRRVDTLLVTDDENHLKG---FIDLESLG 308


>gi|317178810|dbj|BAJ56598.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F30]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|254518057|ref|ZP_05130113.1| MgtE intracellular region [Clostridium sp. 7_2_43FAA]
 gi|226911806|gb|EEH97007.1| MgtE intracellular region [Clostridium sp. 7_2_43FAA]
          Length = 418

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 23/83 (27%), Positives = 47/83 (56%), Gaps = 4/83 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + + DEG ++ G I++ D+  N       + V+D+M +N  VI  D  +  A+++  +++
Sbjct: 327 IYITDEGDRILGDISQLDLILNKP----NVKVKDIMNENINVIRHDINIDEAIEIAAKYD 382

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           +  + V+D+  K IG V+  DL+
Sbjct: 383 LLAIPVIDEEDKLIGAVNTHDLI 405


>gi|222100211|ref|YP_002534779.1| Inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           neapolitana DSM 4359]
 gi|221572601|gb|ACM23413.1| Inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           neapolitana DSM 4359]
          Length = 316

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 44/94 (46%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I+  KR   V VVD  +++ GI++  DI +         SVE  M +N   + E   L  
Sbjct: 41  IMRIKRISGVPVVDSEKRVVGIVSLEDIIKALEGGYIKDSVEKRMTRNVVCLRESDTLQD 100

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++   ++      VV+D  K +GIV   D++ F
Sbjct: 101 TVKTFEKYGYGRFPVVNDEGKLVGIVTKHDIIYF 134


>gi|217034124|ref|ZP_03439544.1| hypothetical protein HP9810_868g17 [Helicobacter pylori 98-10]
 gi|216943408|gb|EEC22864.1| hypothetical protein HP9810_868g17 [Helicobacter pylori 98-10]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|229541805|ref|ZP_04430865.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Bacillus
           coagulans 36D1]
 gi|229326225|gb|EEN91900.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Bacillus
           coagulans 36D1]
          Length = 381

 Score = 36.2 bits (82), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 3/98 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L +AI I+ E+R   + VVD  + L G I    I RN  K    + V+DV+  N
Sbjct: 262 VTVDKTLTEAIQIMKEQRVDSLLVVDSRKVLLGYIDVEIIDRNRRK---PVLVKDVVETN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              + +DTL+   ++ + +  I  + VVD   + +GIV
Sbjct: 319 LIAVEKDTLVRDTVRKILKRGIKYVPVVDHEHRLVGIV 356


>gi|331648254|ref|ZP_08349344.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M605]
 gi|331043114|gb|EGI15254.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M605]
          Length = 306

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|261837940|gb|ACX97706.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 51]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|229159897|ref|ZP_04287904.1| Transcriptional regulator, RpiR [Bacillus cereus R309803]
 gi|228623636|gb|EEK80455.1| Transcriptional regulator, RpiR [Bacillus cereus R309803]
          Length = 287

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPH 171
           D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   ADI L +P   +   H
Sbjct: 182 DIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEADIRLCMPDVEQD--H 239

Query: 172 GLAPTTSAIMQLAIGDALAI 191
            +A   S + QL + DAL +
Sbjct: 240 RIASIASRMTQLNMIDALYV 259


>gi|239625997|ref|ZP_04669028.1| transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]
 gi|239520227|gb|EEQ60093.1| transcriptional regulator [Clostridiales bacterium 1_7_47FAA]
          Length = 295

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 25/95 (26%), Positives = 44/95 (46%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ +  +  S  +   L + L   G      +     H   G +   D+ I +S+SGSS 
Sbjct: 147 QIAVYYVENSASVAGDLVTKLMYLGFNCIMYNDIYLQHISAGNLDSRDVAIGISYSGSSK 206

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
               ++  A++     IAIT+   S++A HADI+L
Sbjct: 207 NTVDVMKLAKKKGAATIAITNFEHSLIAGHADILL 241


>gi|149183777|ref|ZP_01862180.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. SG-1]
 gi|148848510|gb|EDL62757.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. SG-1]
          Length = 488

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +V+  E QKL GI+T  D+   F +D  ++ + DVM K+  V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVNNVEEQKLVGILTNRDL--RFIQDY-SIQISDVMTKDNLVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+Q+ I  L ++DD     G++   D+
Sbjct: 165 APVGTTLDEAEKILQQYKIEKLPLIDDKGVLKGLITIKDI 204


>gi|18313521|ref|NP_560188.1| hypothetical protein PAE2691 [Pyrobaculum aerophilum str. IM2]
 gi|18161061|gb|AAL64370.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 144

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 53/97 (54%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A +I+++KR G + +V EG +L G+++E DI R   + ++      ++     V +E D
Sbjct: 22  EAASIMTKKRIGLLVLVREG-RLFGVVSERDIIRAVAQGISPEEPASLIATRGVVTIEAD 80

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  A +L+R+H +  L VV    +  G+V   D++
Sbjct: 81  EDVIKAAKLMREHGVRHL-VVTKGGELYGVVSVRDIV 116


>gi|152978569|ref|YP_001344198.1| inositol-5-monophosphate dehydrogenase [Actinobacillus succinogenes
           130Z]
 gi|150840292|gb|ABR74263.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus succinogenes
           130Z]
          Length = 488

 Score = 36.2 bits (82), Expect = 7.4,   Method: Compositional matrix adjust.
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    V+D+   L GIIT  D    F KDLN  +V +VM    K++   E       + L
Sbjct: 119 FAGYPVIDQNDNLVGIITARDT--RFVKDLNK-TVAEVMTSKDKLVTVKEGAKREDIIAL 175

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  H +  ++VVDD  K  G++   D  +
Sbjct: 176 MHSHRVEKVLVVDDNFKLKGMITVKDFQK 204


>gi|317182142|dbj|BAJ59926.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F57]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|261868243|ref|YP_003256165.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413575|gb|ACX82946.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 289

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLGM 108
           Q    V+ I+  K RV + G+G SG       +     G P   V A   +H       +
Sbjct: 126 QLERVVQAIQKAK-RVFLFGVGSSGVTAEDAKNKFMRIGVP---VDATGNNHFMYMQAAL 181

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           +   D+ I +S SG S E    L  A++     +A+T   +S +  HAD VL
Sbjct: 182 LKETDVAIGISHSGYSQETAHTLKIAKQNGATTVALTHSLRSPITEHADFVL 233


>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 145

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +NP  +   T L+ A+++L +  IS L VVDD  K +GI+   DL+
Sbjct: 1   MTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLM 48


>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2496178|sp|Q58821|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
 gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 168

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 55/132 (41%), Gaps = 34/132 (25%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL------------ 283
           LID I +  + +     V+++  KL GII+E DI +     ++DLN +            
Sbjct: 33  LIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHNEDLNLILPSPLDLIELPL 92

Query: 284 -------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                               V DVM +   V   D  +  A +L+ ++NI  L VVDD  
Sbjct: 93  KTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEG 152

Query: 325 KAIGIVHFLDLL 336
             IGIV   DL+
Sbjct: 153 NLIGIVTRGDLI 164


>gi|326402860|ref|YP_004282941.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium multivorum
           AIU301]
 gi|325049721|dbj|BAJ80059.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium multivorum
           AIU301]
          Length = 499

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 239 LIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L +A  ++++ R   V VV+ +  +L GI+T  D+   F  D      E +  +N     
Sbjct: 117 LAEAQALMAQHRISGVPVVERDTNRLVGILTHRDV--RFATDPAARVYELMTRENLVTAP 174

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +    VA  LL +H I  L+VVD+  + +G++   D+
Sbjct: 175 ANVAPEVARSLLHKHRIEKLLVVDEDYRCVGLITVKDM 212


>gi|294497033|ref|YP_003560733.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus megaterium QM B1551]
 gi|294346970|gb|ADE67299.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus megaterium QM B1551]
          Length = 600

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 9/135 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S H   +G +   T A        VH A     ++ +++   L I +S SG
Sbjct: 292 RIYIVACGTSYHAGLVGKQFIETWAKVPVE---VHVASEFSYNMPLLSEKPLFIFISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L   +      + IT+   S ++  +D  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVQIKELGYKALTITNVPGSTLSRESDYTLLLHAGPEIA---VASTKAYTAQ 405

Query: 183 LAIGDALAIALLESR 197
           LA+   LA    ++R
Sbjct: 406 LAVLSILAAVTAKTR 420


>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
           6068]
 gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
           staleyi DSM 6068]
          Length = 145

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFHKDLNT 282
            G ++   + G  L   + +L     G + V +   + Q + GIITE D+ R   +   T
Sbjct: 10  KGSAVLTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITERDLLRFAAEKRGT 69

Query: 283 LS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V D M ++P +      L  AM L+ +H I  L V+D  Q  +GI+   D+++
Sbjct: 70  LENTFVADRMTRDPYICHASDELHHAMGLMTEHRIRHLPVIDGDQ-IVGIISIGDIVK 126


>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 150

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 62/145 (42%), Gaps = 30/145 (20%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------ 273
           A D+M +   +  V    P+    ++L E+R     VVDE  +L G++TE D+       
Sbjct: 4   AKDIMTA--EVITVSPDLPVEKLASLLWERRISGAPVVDEQGELVGVVTESDLIDQAKKL 61

Query: 274 ------------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                             R   ++LN +   +V+D+    P  +  DT L     ++ + 
Sbjct: 62  HIPTAIAVLEAVIYLERGRKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIATVMAEK 121

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  L V+D   K +G+V   D++R
Sbjct: 122 HLHTLPVMDRG-KLVGVVGKADVIR 145


>gi|218883533|ref|YP_002427915.1| putative 6-phospho-3-hexuloisomerase [Desulfurococcus kamchatkensis
           1221n]
 gi|218765149|gb|ACL10548.1| putative 6-phospho-3-hexuloisomerase [Desulfurococcus kamchatkensis
           1221n]
          Length = 201

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +V + G G+SG +G   A  L   G  ++ V          G     D+++ +S SG + 
Sbjct: 45  KVFVIGAGRSGLVGKAFAMRLLHLGFNTYIVGETILPRASPG-----DVLVSISGSGRTR 99

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            + A    A+   + +IAIT+   S +   ADIV+ +P
Sbjct: 100 LVVAAAEVAKSVGVKVIAITTYPDSPLGKLADIVVRIP 137


>gi|215487905|ref|YP_002330336.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215265977|emb|CAS10386.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O127:H6 str. E2348/69]
          Length = 282

 Score = 36.2 bits (82), Expect = 7.5,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|317180593|dbj|BAJ58379.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F32]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|317177339|dbj|BAJ55128.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F16]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|315586505|gb|ADU40886.1| IMP dehydrogenase [Helicobacter pylori 35A]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|238926884|ref|ZP_04658644.1| IMP dehydrogenase [Selenomonas flueggei ATCC 43531]
 gi|238885416|gb|EEQ49054.1| IMP dehydrogenase [Selenomonas flueggei ATCC 43531]
          Length = 517

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 25/165 (15%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHS 226
           P TSAIMQ    D +AIAL +    S        E +  ++       + FV +SD   S
Sbjct: 69  PLTSAIMQAVSNDTMAIALAKQGGISFIYGSQSIEAEAAMVARVKNYKSGFV-SSDSNIS 127

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTL 283
            D+         L   + +L++     +AV ++G    KL GI+T  D +R     L+T 
Sbjct: 128 PDTT--------LGGVLDLLAKTGHSTMAVTEDGSANGKLVGIVTSRD-YRVSRMSLDT- 177

Query: 284 SVEDVMIKNPKVILED---TLLTVAMQLLRQHNISVLMVVDDCQK 325
            V   M    K++  D   T LT+A  L+ +H +++L ++D  Q+
Sbjct: 178 KVHTFMTPFEKLVWADADATSLTLANDLIWEHKLNMLPLIDKNQR 222


>gi|238853605|ref|ZP_04643974.1| 3-hexulose-6-phosphate isomerase [Lactobacillus gasseri 202-4]
 gi|238833749|gb|EEQ26017.1| 3-hexulose-6-phosphate isomerase [Lactobacillus gasseri 202-4]
          Length = 180

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 8/148 (5%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++ ++G G+SG + +  A+ L   G  S       A       ++  D++I  S SG+S 
Sbjct: 36  QIFLSGEGRSGLMIAAFANRLTQLGLNSHVSSEITAP-----ALSNGDILIFNSASGTSA 90

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQLA 184
            L +    A++  + ++  T  N S +A  +D+V+T+  + +   +G + P  S   Q +
Sbjct: 91  LLNSQAKVAQQLGVEILTFTVNNNSPLAQKSDVVVTINAQSKDDYNGSIQPMGSLFEQCS 150

Query: 185 --IGDALAIALLESRNFSENDFYVLHPG 210
             I D++ + +L   + S      +H  
Sbjct: 151 FLIFDSIILHILNQNHLSSKKMRQMHSN 178


>gi|282912550|ref|ZP_06320346.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324246|gb|EFB54562.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312436569|gb|ADQ75640.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 266

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/146 (22%), Positives = 67/146 (45%), Gaps = 5/146 (3%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++K+++ +  ++  G+G SG   ++    +   G        +        +++  D+ I
Sbjct: 112 IDKLQSSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFI 170

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAP 175
            +S SG++ EL +    A+     ++AIT+ E   +  C AD+VL    +  +  H    
Sbjct: 171 AMSNSGNTSELISAAEVAKSHGAYVVAITNFEGSKLTDC-ADLVLLTTDQSRNNDHQFIN 229

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE 201
           T   I  L + D ++  LLE+ N S+
Sbjct: 230 T--QIATLFLIDIVSYHLLENTNLSQ 253


>gi|114563439|ref|YP_750952.1| signal transduction protein [Shewanella frigidimarina NCIMB 400]
 gi|114334732|gb|ABI72114.1| putative signal transduction protein with CBS domains [Shewanella
           frigidimarina NCIMB 400]
          Length = 152

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 16/135 (11%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           T  +C +D+M +   +  +++   LI A  I     F  + VVD  ++L GI++  D  R
Sbjct: 17  TKHLCVADIMTT--RVVTIEMDDRLILAKEIFDNVSFHHLLVVD-NEQLSGILSHRDFLR 73

Query: 275 ----------NFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                        +D  TL   V  VM  NP  I     +  A +L+  H+I  L V+D+
Sbjct: 74  ALSPNIGTAAELMRDTETLQKRVHQVMTHNPFTIAPHCDINQATKLILDHDIGCLPVLDN 133

Query: 323 CQKAIGIVHFLDLLR 337
               +GI+ + DLL 
Sbjct: 134 -NVIVGIITWKDLLN 147


>gi|315640517|ref|ZP_07895625.1| RpiR family transcriptional regulator [Enterococcus italicus DSM
           15952]
 gi|315483721|gb|EFU74209.1| RpiR family transcriptional regulator [Enterococcus italicus DSM
           15952]
          Length = 274

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 45/96 (46%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R++    G +  +    A      G  +      + +   L  +T DDL++++S SG + 
Sbjct: 126 RIIFLAYGNTIPVAMDAAYRFNQIGIAASAFDIWDTAAAYLLTMTEDDLVVIISNSGETR 185

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            L    +Y +   + LIA+T+  +S +A  AD+ +T
Sbjct: 186 PLIQAAHYCKEQHLYLIALTNNRQSPIATLADLHVT 221


>gi|308062150|gb|ADO04038.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Cuz20]
          Length = 481

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAR 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|293390295|ref|ZP_06634629.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950829|gb|EFE00948.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 289

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 7/112 (6%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH---GDLGM 108
           Q    V+ I+  K RV + G+G SG       +     G P   V A   +H       +
Sbjct: 126 QLERVVQAIQKAK-RVFLFGVGSSGVTAEDAKNKFMRIGVP---VDATGNNHFMYMQAAL 181

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           +   D+ I +S SG S E    L  A++     +A+T   +S +  HAD VL
Sbjct: 182 LKETDVAIGISHSGYSQETAHTLKIAKQNGATTVALTHSLRSPITEHADFVL 233


>gi|298492601|ref|YP_003722778.1| polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
 gi|298234519|gb|ADI65655.1| Polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
          Length = 907

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   ++VV++  K+ GII+  D+    H   +   V+  M  N K I  DT+L     
Sbjct: 342 RYGHSGLSVVNDQDKIVGIISRRDLDIALHHGFSHAPVKGYMTTNLKTITPDTILPQIGS 401

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  ++I  L V+++    +GIV   D+LR
Sbjct: 402 LMVTYDIGRLPVLENG-NLVGIVTRTDVLR 430


>gi|254380667|ref|ZP_04996033.1| CBS domain containing protein [Streptomyces sp. Mg1]
 gi|194339578|gb|EDX20544.1| CBS domain containing protein [Streptomyces sp. Mg1]
          Length = 139

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 31/122 (25%), Positives = 57/122 (46%), Gaps = 6/122 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
           A ++MH G S   V+    L+DA   +SE   G + +     +L GIIT+ DI       
Sbjct: 4   AREIMHEGASC--VREEETLMDAARRMSELGVGALPICGPDDRLHGIITDRDIVIKCLAK 61

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            KD + ++   +    P  +         +Q++++H +  L V++D  + +G++   DL 
Sbjct: 62  GKDPHHMTAGMLAEGKPLTVAAGADSGQVLQIMQEHRVRRLPVIED-HRLVGMISEADLA 120

Query: 337 RF 338
           R 
Sbjct: 121 RH 122


>gi|251799591|ref|YP_003014322.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Paenibacillus sp. JDR-2]
 gi|247547217|gb|ACT04236.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Paenibacillus sp. JDR-2]
          Length = 610

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +IT D L+IV+S SG + +  A L  A+R    ++AIT+   S VA  AD VL     PE
Sbjct: 337 IITPDTLVIVVSQSGETADTLAALREAQRNGARVLAITNVVGSSVAREADDVLVTWAGPE 396


>gi|167629610|ref|YP_001680109.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Heliobacterium modesticaldum Ice1]
 gi|167592350|gb|ABZ84098.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Heliobacterium modesticaldum Ice1]
          Length = 655

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           ++  + L+IV+S SG + +  A +  AR     ++A+T+   S ++  AD VL     PE
Sbjct: 383 IVDENTLVIVVSQSGETADTLAAMREARSKGAKVLAVTNVVGSTISREADSVLYTWAGPE 442

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESR 197
                +A T +   QLA  + +A+AL + R
Sbjct: 443 IA---VASTKAYTTQLAAMNCIALALAQVR 469


>gi|159905804|ref|YP_001549466.1| CBS domain-containing protein [Methanococcus maripaludis C6]
 gi|159887297|gb|ABX02234.1| CBS domain containing membrane protein [Methanococcus maripaludis
           C6]
          Length = 279

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V   D+M +   I  V +   LIDA+  ++E   G + VV EG+KL G+ITE DI +  +
Sbjct: 221 VRMQDIMKT--DIVSVTLDIKLIDAVKKMNELNIGVLPVV-EGEKLIGLITEKDIVKCIY 277

Query: 278 K 278
           K
Sbjct: 278 K 278


>gi|154497160|ref|ZP_02035856.1| hypothetical protein BACCAP_01453 [Bacteroides capillosus ATCC
           29799]
 gi|150273559|gb|EDN00687.1| hypothetical protein BACCAP_01453 [Bacteroides capillosus ATCC
           29799]
          Length = 291

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 22/125 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHG--DLGM- 108
           GR+   G G SG +G   A+    T             G    F+ A E +    +LG  
Sbjct: 58  GRLFYMGAGTSGRLGVLDAAECPPTFGVSPDLVVGLIAGGEKAFIKAVEGAEDSRELGRD 117

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +T+DDL++ ++ SG +  +   L YAR      +AI+    S V   AD+ + +
Sbjct: 118 DLKDNNLTKDDLVVGIAASGRTPYVLGGLDYARELGCRTVAISCNAGSAVGQAADLAIEV 177

Query: 163 PKEPE 167
              PE
Sbjct: 178 VVGPE 182


>gi|32564432|ref|NP_871971.1| hypothetical protein R53.7 [Caenorhabditis elegans]
 gi|26985785|emb|CAD59154.1| C. elegans protein R53.7b, confirmed by transcript evidence
           [Caenorhabditis elegans]
          Length = 488

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           ASD++ SG+ +  V I   ++D    L + R   V V+D+ +++  II+   +    HK 
Sbjct: 249 ASDIL-SGNQLVSVSISSKILDLCEELHQNRLHRVVVLDDAKEVVNIISVRRVIAAIHKQ 307

Query: 280 LNTLSVEDVMIK-----------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             +L     + K           N  VI ++  +  AM+ +   + S L VVD  Q  IG
Sbjct: 308 NRSLHFAQWLSKSIGMSAIGTWENVAVISQNETVYRAMEDMLGFHYSALPVVDSKQNVIG 367

Query: 329 IVHFLDLLR 337
           ++   D+ +
Sbjct: 368 VITKTDICK 376


>gi|71907424|ref|YP_285011.1| CBS [Dechloromonas aromatica RCB]
 gi|71847045|gb|AAZ46541.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 144

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNT 282
            G   P    G  + +A  I+ E     + ++D+G  L GI TE DI FR      D   
Sbjct: 11  QGRPFPTTGSGTTVREAAIIMKEWHSSAILIIDKGL-LAGICTERDIVFRAVANGCDPAN 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  +M +N + +  D     A+ L+ +     + VVDD    +G++   D L
Sbjct: 70  TAITTIMTRNIQTVSPDKPFGHALHLMYEGGFRHIPVVDDAGHPVGLLAAHDAL 123


>gi|57641201|ref|YP_183679.1| transcription regulator [Thermococcus kodakarensis KOD1]
 gi|57159525|dbj|BAD85455.1| predicted transcription regulator, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 192

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 5/99 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDT 300
           I +++E     + V+  G K+ G ITE  + R    + D+    V +VM +   ++ ED 
Sbjct: 91  IRLMNEHNISQIPVIS-GNKVVGSITERTLVRQSLEYDDIYGHKVVEVMEEPFPIVNEDE 149

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            L V   LL  H    ++V D   K +GI+  +DL R G
Sbjct: 150 DLEVVKYLLEDH--PAVLVQDKAGKIVGIITRVDLFRLG 186


>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 36.2 bits (82), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 18/53 (33%), Positives = 31/53 (58%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           G+S+  V     + +AI +L+EK+ G + V D G  + GI++E D+ R   +D
Sbjct: 11  GNSVVTVPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRALARD 63


>gi|294012546|ref|YP_003546006.1| IMP dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675876|dbj|BAI97394.1| IMP dehydrogenase [Sphingobium japonicum UT26S]
          Length = 485

 Score = 36.2 bits (82), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 6/99 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           L DA  +++  +   + VV+   KL GI+T  D+    N  + ++ L   D    N   +
Sbjct: 104 LADAQMLMTRHKISGIPVVEASGKLVGILTNRDVRFAENPAQPVSELMTHD----NLATV 159

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   AM+LL Q  I  L+VVDD    +G++   D+
Sbjct: 160 KTGVGQEEAMRLLHQRRIEKLLVVDDQYHCVGLITVKDI 198


>gi|206579786|ref|YP_002238730.1| hypothetical protein KPK_2903 [Klebsiella pneumoniae 342]
 gi|206568844|gb|ACI10620.1| conserved hypothetical protein [Klebsiella pneumoniae 342]
          Length = 307

 Score = 36.2 bits (82), Expect = 7.7,   Method: Compositional matrix adjust.
 Identities = 38/158 (24%), Positives = 66/158 (41%), Gaps = 22/158 (13%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTG------------TPSFFVHAAEASHGDLGMI--- 109
           GR+VI G G SG    +  S  +  G            T +       A++ DLG     
Sbjct: 65  GRLVIIGAGASGRTAIEAVSDYSPEGKHALVGLIAGGQTAAMAERETAANNYDLGAFELQ 124

Query: 110 ----TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
               +  D+++ L+ SG +  +   + +A     P+  +T +  S  A  ADI++     
Sbjct: 125 SLDFSNHDMLLALTVSGKTPWVWGAMRHAWSLGAPIAVVTQQAASEAAQLADIIIAPQTG 184

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL--AIALLESRNFSE 201
           PE+   GLA   + + Q  I + L   +A+ + R +S 
Sbjct: 185 PEAVS-GLANPKAQLAQRQIVNMLTTGLAIRDGRVYSN 221


>gi|323706022|ref|ZP_08117592.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534636|gb|EGB24417.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 484

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           DA+ ++   R   V +   G KL GIIT  DI   F  +L+   +++VM K   V     
Sbjct: 109 DAVELMERYRISGVPIT-VGSKLMGIITNRDI--RFESNLDR-PIKEVMTKENLVTAPVG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T +  A ++L++H I  L +VD+     G++   D+
Sbjct: 165 TTIDEAREILKKHKIEKLPLVDEDNNLKGLITIKDI 200


>gi|282862612|ref|ZP_06271673.1| sugar isomerase (SIS) [Streptomyces sp. ACTE]
 gi|282562298|gb|EFB67839.1| sugar isomerase (SIS) [Streptomyces sp. ACTE]
          Length = 216

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 21/135 (15%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT- 110
           ++  A+ ++    GR+++ G G S      L + L          ++A A H D    T 
Sbjct: 29  RWGAALARVLPGGGRLLVAGNGGSAAQAQHLTAELVGRYKDDRPAYSALALHADTSSTTA 88

Query: 111 --------------------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
                               R D++++LS SG+S  L A    ARR  +P+ A+T    +
Sbjct: 89  IANDYGVQEVFARQTCAHGRRGDVLMLLSTSGASANLLAAAREARRIGMPVWALTGPEPN 148

Query: 151 VVACHADIVLTLPKE 165
            +A  +D  L +  E
Sbjct: 149 PLAAASDEALCVEAE 163


>gi|260773740|ref|ZP_05882655.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
 gi|260610701|gb|EEX35905.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
          Length = 619

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 5/79 (6%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           A+V +  +L G++T+ D+ +        LNT  +  +M ++P+ I  D LL  AM+++  
Sbjct: 185 ALVMDNDQLVGVVTDRDMTKRVIAAGLTLNT-PISQIMTQHPQTIQSDALLLEAMEMMML 243

Query: 312 HNISVLMVVDDCQKAIGIV 330
           HN+  L V++  ++ +G++
Sbjct: 244 HNVRSLPVLEG-EQVVGVL 261


>gi|52078500|ref|YP_077291.1| inosine 5'-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52783864|ref|YP_089693.1| inosine 5'-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52001711|gb|AAU21653.1| inosine-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52346366|gb|AAU39000.1| GuaB [Bacillus licheniformis ATCC 14580]
          Length = 488

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 6/102 (5%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 108 VFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 164

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               T L  A ++L+++ I  L ++DD     G++   D+ +
Sbjct: 165 APVGTTLDEAEKILQKYKIEKLPLLDDQGVLKGLITIKDIEK 206


>gi|294010055|ref|YP_003543515.1| CBS domain protein [Sphingobium japonicum UT26S]
 gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
          Length = 142

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK 278
           A+ +   G  +  V+    ++  + +L+++R GCV VVD+G+ + GI +E D+ +R   +
Sbjct: 4   AAILQRKGQDVVQVQSSDTVLSVVRLLAQRRIGCVPVVDDGE-VVGIFSERDLAYRVAQE 62

Query: 279 DLNTLS--VEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L   V ++M   P +  +D T +   + L+ +  I  L VV D    +G+V   DL
Sbjct: 63  GAAVLDRPVGEIM-TAPAITTDDRTPVNHCLSLMTKRRIRHLPVVVDG-ALVGLVSIGDL 120

Query: 336 LRFGI 340
           ++F I
Sbjct: 121 VKFRI 125


>gi|148377894|ref|YP_001256770.1| transcriptional regulator [Mycoplasma agalactiae PG2]
 gi|291320619|ref|YP_003515884.1| transcriptional regulator [Mycoplasma agalactiae]
 gi|148291940|emb|CAL59331.1| Transcriptional regulator [Mycoplasma agalactiae PG2]
 gi|290752955|emb|CBH40930.1| Transcriptional regulator [Mycoplasma agalactiae]
          Length = 288

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 2/129 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            V+I G G S      L + L   G    +          L     +D +IV S +  S 
Sbjct: 132 NVLIYGSGSSQRRSLDLVANLIKIGKSVVYNSDFHIFFPALANADSNDTLIVFSNNLKST 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E   ++  A +  + +IAITS+N + +  + D+++   K        L P +S + Q+ I
Sbjct: 192 ESHFVISNAHKNGLKIIAITSKNDNKINKNLDVIIQYQKIQNDTL--LVPVSSRVSQMLI 249

Query: 186 GDALAIALL 194
           G+ L  A++
Sbjct: 250 GNILFEAII 258


>gi|42519868|ref|NP_965798.1| N-acetylmuramic acid-6-phosphate etherase [Lactobacillus johnsonii
           NCC 533]
 gi|81667321|sp|Q74HC8|MURQ_LACJO RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|41584158|gb|AAS09764.1| hypothetical protein LJ_1819 [Lactobacillus johnsonii NCC 533]
          Length = 298

 Score = 36.2 bits (82), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 50/125 (40%), Gaps = 22/125 (17%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGMITR 111
           GR++  G G SG +G   A  L  T             G  S    A E +  DL +  +
Sbjct: 63  GRLIYVGAGTSGRLGILDAVELVPTYRINPERAIGLIAGGQSAMFRAVEGAEDDLQLGEK 122

Query: 112 D---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           D         D++I L+ SG +  +   L YA +     I+I    KS +  +ADI +  
Sbjct: 123 DLKDLKLNEKDIVIGLAASGRTPYVIGCLKYANQVKALTISIACVKKSEIGKYADIAIEA 182

Query: 163 PKEPE 167
              PE
Sbjct: 183 VVGPE 187


>gi|328551876|gb|AEB22368.1| N-acetylmuramic acid-6-phosphate etherase [Bacillus
           amyloliquefaciens TA208]
          Length = 309

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)

Query: 48  ELSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPS 93
           E++ QF H ++ +     GR++  G G SG +G   A     T             G   
Sbjct: 53  EIAVQFAHQSLRR----NGRLIYAGAGTSGRLGVLDAVECPPTYSVSPDTVIGLMAGGAD 108

Query: 94  FFVHAAEA-----SHGDLGM----ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            F+ AAE        G L +    +T DD +I ++ SG +      L YA+      +A+
Sbjct: 109 AFLQAAEGIEDSEETGALDLKTIGLTEDDTVIAIAASGRTPYAAGALKYAKTIGAKTVAL 168

Query: 145 TSENKSVVACHADIVLTLPKEPE 167
           T    S+++ +AD  + +   PE
Sbjct: 169 TCNKHSLISTYADHSIEVVVGPE 191


>gi|302809978|ref|XP_002986681.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
 gi|300145569|gb|EFJ12244.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
          Length = 545

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-----IFRNFHKDLNTLSVEDVMI 290
           G  + DA   +  +R     + D    L GIIT+ D     I  N   D  TL V  VM 
Sbjct: 57  GTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPD-ETL-VSKVMT 114

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           KNP  ++ D L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 115 KNPVFVISDALAVDALQKMVQGKFRHLPVVENGE----VIALLDITK 157


>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
 gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
           [Methylotenera mobilis JLW8]
          Length = 143

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           P+ DA+ +L+E + G + V+ EGQ L GI +E D  R      +   T S+ +VM     
Sbjct: 24  PVFDALVVLAEYKIGALIVL-EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVMTSKVL 82

Query: 295 VILEDTLLTVAMQLLRQHNI 314
                  +  A+ L+ +H I
Sbjct: 83  TATPSDSVEYALSLMTEHRI 102


>gi|261338129|ref|ZP_05966013.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium gallicum
           DSM 20093]
 gi|270276757|gb|EFA22611.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium gallicum
           DSM 20093]
          Length = 507

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 27/87 (31%), Positives = 43/87 (49%), Gaps = 9/87 (10%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-----PKVILEDTLLTVAMQLLR 310
           VVD   KL GIIT  D+     +D + L V D+M ++     P  I ++     A  LL 
Sbjct: 133 VVDNEGKLVGIITNRDMRFIASEDYDHLRVRDIMTRDNLITGPSNISKED----AHDLLA 188

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +H +  L +VD+  K  G++   D ++
Sbjct: 189 KHKVEKLPLVDESGKLTGLITVKDFVK 215


>gi|297619858|ref|YP_003707963.1| inosine-5'-monophosphate dehydrogenase [Methanococcus voltae A3]
 gi|297378835|gb|ADI36990.1| inosine-5'-monophosphate dehydrogenase [Methanococcus voltae A3]
          Length = 498

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 4/94 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I+ E     + VVD+ + L GIIT  D+   F  D+N L V+DVM K+     EDT    
Sbjct: 115 IMYENEISGLPVVDKNKTLLGIITTRDL--KFVPDMN-LKVKDVMTKDVLHAHEDTPYED 171

Query: 305 AMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
            +  L ++ I  + +++ + +  +G+V   D+L+
Sbjct: 172 ILNRLYENKIERMPILERETRVLMGMVTLRDILK 205


>gi|116873093|ref|YP_849874.1| N-acetylmuramic acid-6-phosphate etherase [Listeria welshimeri
           serovar 6b str. SLCC5334]
 gi|123461122|sp|A0AJB3|MURQ_LISW6 RecName: Full=N-acetylmuramic acid 6-phosphate etherase;
           Short=MurNAc-6-P etherase; AltName: Full=N-acetylmuramic
           acid 6-phosphate hydrolase; AltName:
           Full=N-acetylmuramic acid 6-phosphate lyase
 gi|116741971|emb|CAK21095.1| SIS domain protein [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 296

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 30/116 (25%), Positives = 47/116 (40%), Gaps = 22/116 (18%)

Query: 65  GRVVITGIGKSGHIGSKLASTLAST-------------GTPSFFVHAAEASHGDLGM--- 108
           GR++  G G SG +G   A+    T             G    FV A E +   L +   
Sbjct: 62  GRLIYLGAGTSGRLGVLDAAECVPTFGVSKEQVIGLISGGEKAFVSAVEGAEDSLSLGKQ 121

Query: 109 ------ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                 + +DD +I ++ SG +  +   L YAR       AI+    + ++ HADI
Sbjct: 122 DLEKINLVKDDFVIGIAASGRTPYVIGALDYARLIGAKTAAISCNANAEISAHADI 177


>gi|301022066|ref|ZP_07185993.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331643184|ref|ZP_08344319.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
 gi|331678556|ref|ZP_08379231.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
 gi|332278283|ref|ZP_08390696.1| conserved hypothetical protein [Shigella sp. D9]
 gi|12516974|gb|AAG57675.1|AE005486_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|987639|dbj|BAA10911.1| unnamed protein product [Escherichia coli K-12]
 gi|1033150|gb|AAA79823.1| alternate name yfhH [Escherichia coli str. K-12 substr. MG1655]
 gi|13362898|dbj|BAB36850.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856561|gb|AAZ89268.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81246424|gb|ABB67132.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|209762938|gb|ACI79781.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762940|gb|ACI79782.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762942|gb|ACI79783.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762944|gb|ACI79784.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762946|gb|ACI79785.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|299881371|gb|EFI89582.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331039982|gb|EGI12202.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
 gi|331075016|gb|EGI46336.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
 gi|332100635|gb|EGJ03981.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 306

 Score = 36.2 bits (82), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 247 RASHCLYTIAEEQATNSASISACHAQGMLT 276


>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 198

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +I+AI +++EK  G V V+D G +L GI++E D  R      +  +T SV  +M      
Sbjct: 1   MIEAIRLMAEKAIGAVLVMD-GPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAEVVT 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     +   MQL+       L VV++  +  G++   DL++
Sbjct: 60  VSPSDTVERCMQLMSDGRFRHLPVVEN-SRVQGLISIGDLVK 100


>gi|257894746|ref|ZP_05674399.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|257831125|gb|EEV57732.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
          Length = 272

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 36/133 (27%), Positives = 56/133 (42%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            + I G+G SG+    L +     G  +  V           ++T +DL+I+ S SG + 
Sbjct: 123 NIYIFGVGSSGNTSLDLENMFLRVGVQAKAVLDPHFQAQVASLLTVNDLVIIFSLSGKTK 182

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +    L  A++    +IAIT+   S +   AD+VL    E       LA     I QL I
Sbjct: 183 DTYDSLKIAKKNGAKIIAITNYIHSPIGKSADLVLQTAIEEFLNGGSLA---GKISQLYI 239

Query: 186 GDALAIALLESRN 198
            D L     ++ N
Sbjct: 240 CDLLVHGYEQNNN 252


>gi|68475928|ref|XP_718037.1| hypothetical protein CaO19.13191 [Candida albicans SC5314]
 gi|46439783|gb|EAK99097.1| hypothetical protein CaO19.13191 [Candida albicans SC5314]
          Length = 336

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMI 290
           +  P+I+ I +L+E     + +VD   KL  +    DI        + DL+ LSV D ++
Sbjct: 218 MDTPVIEVIHLLTENSVSSIPIVDGQGKLINVYEAVDILALVKGGMYTDLD-LSVGDALL 276

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +         L D L T+ M  +R+  +  L VVDD  K + ++   D+L +
Sbjct: 277 RRSEEFEGVHTCTLNDRLSTI-MDTIRKSRLHRLFVVDDEGKLVSVITLSDILNY 330


>gi|69248338|ref|ZP_00604725.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257883559|ref|ZP_05663212.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257891901|ref|ZP_05671554.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|258616982|ref|ZP_05714752.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecium DO]
 gi|260562619|ref|ZP_05833121.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|261207961|ref|ZP_05922641.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|293569090|ref|ZP_06680401.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
 gi|294622940|ref|ZP_06701835.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|314998005|ref|ZP_07862899.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|68194447|gb|EAN08949.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257819217|gb|EEV46545.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257828261|gb|EEV54887.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|260072947|gb|EEW61300.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|260077831|gb|EEW65542.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|291588201|gb|EFF20038.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
 gi|291597649|gb|EFF28805.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|309385939|gb|ADO66854.1| helix-turn-helix protein RpiR [Enterococcus faecium]
 gi|313587989|gb|EFR66834.1| SIS domain protein [Enterococcus faecium TX0133a01]
          Length = 272

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 60/143 (41%), Gaps = 5/143 (3%)

Query: 58  EKIKAI--KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E IK I     + I G+G SG+    L +     G  +  V           ++T +DL+
Sbjct: 113 EAIKMITQSKNIYIFGVGSSGNTSLDLENMFLRVGVQAKAVLDPHFQAQVASLLTVNDLV 172

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I+ S SG + +    L  A++    +IAIT+   S +   AD+VL    E       LA 
Sbjct: 173 IIFSLSGKTKDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADLVLQTAIEEFLNGGSLA- 231

Query: 176 TTSAIMQLAIGDALAIALLESRN 198
               I QL I D L     ++ N
Sbjct: 232 --GKISQLYICDLLVHGYEQNNN 252


>gi|313889535|ref|ZP_07823181.1| inosine-5'-monophosphate dehydrogenase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313122147|gb|EFR45240.1| inosine-5'-monophosphate dehydrogenase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 493

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)

Query: 245 ILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTL 301
           ++   R   V +V+  E ++L GIIT  D+   F  D ++  + + M     V  E  T 
Sbjct: 116 LMQRYRISGVPIVETMENRRLVGIITNRDM--RFISDYDS-PISEHMTSEKLVTAEVGTD 172

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LT A Q+L QH I  L ++DD  +  G++   D+ +
Sbjct: 173 LTTAEQILHQHRIEKLPLIDDSGRLSGLITIKDIEK 208


>gi|238882984|gb|EEQ46622.1| nuclear protein SNF4 [Candida albicans WO-1]
          Length = 335

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMI 290
           +  P+I+ I +L+E     + +VD   KL  +    DI        + DL+ LSV D ++
Sbjct: 217 MDTPVIEVIHLLTENSVSSIPIVDGQGKLINVYEAVDILALVKGGMYTDLD-LSVGDALL 275

Query: 291 KNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +         L D L T+ M  +R+  +  L VVDD  K + ++   D+L +
Sbjct: 276 RRSEEFEGVHTCTLNDRLSTI-MDTIRKSRLHRLFVVDDEGKLVSVITLSDILNY 329


>gi|291300343|ref|YP_003511621.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569563|gb|ADD42528.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 316

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 4/128 (3%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIG S  +  +L   L   G P++  +   ++     ++TR+D+ I  S SG++ E   +
Sbjct: 155 GIGGSALVVGELHMGLHRIGIPAWVWNEVHSALASAALLTREDVAIGFSHSGATVETVEM 214

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLT-LPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           L  A       +A+TS   S +   +DIVLT   +   S    LA   S   QL + DAL
Sbjct: 215 LAEAGSHGALTVAVTSYPSSPITEVSDIVLTSATRANNSQSDVLAARHS---QLLVSDAL 271

Query: 190 AIALLESR 197
            +A+ + R
Sbjct: 272 YLAVAQRR 279


>gi|227538978|ref|ZP_03969027.1| nucleotidyl transferase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227241181|gb|EEI91196.1| nucleotidyl transferase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 350

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           V+H G S+    I   LI   +IL         VVDE +KL G +T+GD+ R F + L  
Sbjct: 9   VIHKGQSVRDALIKLDLIAPSSIL--------FVVDENKKLLGSLTDGDLRRGFIRGLGF 60

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             S+ D +  NP  I E+      ++  R+  + ++ ++   +  + I+ F
Sbjct: 61  ENSLLDFIQSNPVFIRENEYDLNQLEKFRKDLLKIIPIISPTRHIVDILDF 111


>gi|255658564|ref|ZP_05403973.1| N-acetylmuramic acid 6-phosphate etherase [Mitsuokella multacida
           DSM 20544]
 gi|260849368|gb|EEX69375.1| N-acetylmuramic acid 6-phosphate etherase [Mitsuokella multacida
           DSM 20544]
          Length = 304

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 24/126 (19%)

Query: 65  GRVVITGIGKSGHIG--------------SKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
           GR+   G G SG +G               +L   L + GTP+ F  A E +  +  +  
Sbjct: 63  GRLFYLGAGTSGRLGILDASECPPTYGTAPELVQGLIAGGTPAIF-RAQEGAEDNPDLAV 121

Query: 111 RD---------DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
           +D         D+++ ++ SG +  +   L YA+      IA++    S +A  ADI LT
Sbjct: 122 QDLKEHGFTEKDVLVGIAASGRTPYVIGGLNYAKALGALTIALSCSEHSKIAALADIALT 181

Query: 162 LPKEPE 167
               PE
Sbjct: 182 PVTGPE 187


>gi|169831364|ref|YP_001717346.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638208|gb|ACA59714.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 873

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 250 RFG--CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R+G   + VV +G  L G+I+  D+ +    +L    V+  M KN   +  DT +T    
Sbjct: 336 RYGHRGMPVVSDGS-LVGVISRRDVEKALRHNLGHAPVKAYMSKNVMTVSRDTPVTEVQA 394

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ ++NI  L VVD+    +GIV   D+L+
Sbjct: 395 VMIENNIGRLPVVDNGY-LVGIVSRTDILK 423


>gi|148260198|ref|YP_001234325.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium cryptum JF-5]
 gi|146401879|gb|ABQ30406.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium cryptum JF-5]
          Length = 499

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 3/98 (3%)

Query: 239 LIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           L +A  ++++ R   V VV+ +  +L GI+T  D+   F  D      E +  +N     
Sbjct: 117 LAEAQALMAQHRISGVPVVERDTNRLVGILTHRDV--RFATDPAARVYELMTRENLVTAP 174

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +    VA  LL +H I  L+VVD+  + +G++   D+
Sbjct: 175 ANVAPEVARSLLHKHRIEKLLVVDEDYRCVGLITVKDM 212


>gi|47093437|ref|ZP_00231201.1| CBS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|47018165|gb|EAL08934.1| CBS domain protein [Listeria monocytogenes str. 4b H7858]
          Length = 376

 Score = 36.2 bits (82), Expect = 8.0,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 198 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 253

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 254 VIPVVKDDLTLIGIVSRQDILK 275


>gi|308172064|ref|YP_003918769.1| D-lactyl ether N-acetylmuramic-6-phosphate acid etherase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307604928|emb|CBI41299.1| D-lactyl ether N-acetylmuramic-6-phosphate acid etherase [Bacillus
           amyloliquefaciens DSM 7]
 gi|328910132|gb|AEB61728.1| D-lactyl ether N-acetylmuramic-6-phosphate acid etherase [Bacillus
           amyloliquefaciens LL3]
          Length = 309

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 36/143 (25%), Positives = 60/143 (41%), Gaps = 27/143 (18%)

Query: 48  ELSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-------------GTPS 93
           E++ QF H ++ +     GR++  G G SG +G   A     T             G   
Sbjct: 53  EIAVQFAHQSLRR----NGRLIYAGAGTSGRLGVLDAVECPPTYSVSPDTVIGLMAGGAD 108

Query: 94  FFVHAAEA-----SHGDLGM----ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            F+ AAE        G L +    +T DD +I ++ SG +      L YA+      +A+
Sbjct: 109 AFLQAAEGIEDSEETGALDLKTIGLTEDDTVIAIAASGRTPYAAGALKYAKTIGAKTVAL 168

Query: 145 TSENKSVVACHADIVLTLPKEPE 167
           T    S+++ +AD  + +   PE
Sbjct: 169 TCNKHSLISTYADHSIEVVVGPE 191


>gi|260427030|ref|ZP_05781009.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Citreicella sp. SE45]
 gi|260421522|gb|EEX14773.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Citreicella sp. SE45]
          Length = 607

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 10/108 (9%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-----IFRNFHKDLNTLSVEDVMI 290
           G  + +A ++++E+R   V ++ EG+ LKGI+T  D     + R    D     V  VM 
Sbjct: 158 GATVQEAASLMAERRVSSVCII-EGEALKGILTIRDVSAKVVARGLPFD---TPVTQVMT 213

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P  +    + +  + ++ + NI  + V +   + +GIV   DL RF
Sbjct: 214 EAPLTLAPSDIGSDVLHMMMERNIGHVPVTEGG-RLVGIVTQTDLTRF 260


>gi|229163604|ref|ZP_04291553.1| hypothetical protein bcere0009_43700 [Bacillus cereus R309803]
 gi|228619854|gb|EEK76731.1| hypothetical protein bcere0009_43700 [Bacillus cereus R309803]
          Length = 437

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            E   G   +VDE +K+ GI+T  D+     K++    ++ VM K+P  +     +  A 
Sbjct: 218 EETMHGRYPIVDENKKVLGIVTSKDMI-GVAKEM---PIDKVMTKHPITVNGKMSVAAAA 273

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    I +L VVD+  K  GI+   D+L+
Sbjct: 274 RMMVWEGIELLPVVDEGNKLQGIISRQDVLQ 304


>gi|307153353|ref|YP_003888737.1| CBS domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
          Length = 153

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V DVM  NP  +   T L+ A++L+ +  IS L VV++    +G++   DL+
Sbjct: 2   TKTVGDVMTHNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLM 56


>gi|157156947|ref|YP_001463883.1| putative DNA-binding transcriptional regulator [Escherichia coli
           E24377A]
 gi|191167960|ref|ZP_03029762.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
 gi|193064074|ref|ZP_03045159.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|193068304|ref|ZP_03049267.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|194427291|ref|ZP_03059841.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|260845191|ref|YP_003222969.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|309794386|ref|ZP_07688809.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|157078977|gb|ABV18685.1| transcriptional regulator, RpiR family [Escherichia coli E24377A]
 gi|190901967|gb|EDV61714.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
 gi|192929309|gb|EDV82918.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|192958256|gb|EDV88696.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|194414612|gb|EDX30884.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|195183134|dbj|BAG66681.1| putative transcriptional regulator [Escherichia coli O111:H-]
 gi|257760338|dbj|BAI31835.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|308121842|gb|EFO59104.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|323159239|gb|EFZ45228.1| hypothetical protein ECE128010_4494 [Escherichia coli E128010]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|313623599|gb|EFR93769.1| conserved protein YtoI [Listeria innocua FSL J1-023]
          Length = 437

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLSGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|289577725|ref|YP_003476352.1| nucleotidyl transferase [Thermoanaerobacter italicus Ab9]
 gi|289527438|gb|ADD01790.1| Nucleotidyl transferase [Thermoanaerobacter italicus Ab9]
          Length = 352

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 14/113 (12%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED---- 287
           L+K    + +AI  L+E     + V+D+  +L G +T+GDI R     LN +S ++    
Sbjct: 8   LIKEESLIKEAIKQLNENTLQILLVIDDNYRLIGTVTDGDIRRAI---LNNISFDEPVGK 64

Query: 288 VMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M + PK +    E+     A +L+ +H I  + V+D  ++ + ++   +LL 
Sbjct: 65  IMNRVPKFVYIGEEEN----AKELMIKHRIKTIPVLDREKRVVDLILMENLLE 113


>gi|261340862|ref|ZP_05968720.1| transcriptional regulator, RpiR family [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317292|gb|EFC56230.1| transcriptional regulator, RpiR family [Enterobacter cancerogenus
           ATCC 35316]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/131 (22%), Positives = 56/131 (42%), Gaps = 2/131 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+++TGIG SG +       L   G  +       A    +  +  +D+++ +S+SG   
Sbjct: 134 RIILTGIGASGLVARNFGWKLTKIGLNAIVEQDMHALLATVQAMDPEDVLLAISYSGERR 193

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+        R    ++AIT    + +   A   L    E ++       +TSA  Q+ +
Sbjct: 194 EINMATDETLRVGGKILAITGFTPNALQQRATRCLYTIAEEQATRSAAISSTSA--QMML 251

Query: 186 GDALAIALLES 196
            D L +AL++ 
Sbjct: 252 TDLLFMALVQQ 262


>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
           15579]
 gi|187774141|gb|EDU37943.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
           15579]
          Length = 144

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF-HKDLNTLSVEDVMIKNPKVILED 299
           A  ++SE   G + +  E  K+ G+IT+ DI  R+  +   N + V D+M  NP V  +D
Sbjct: 29  AARLMSEHNVGSIPIC-ENNKVVGVITDRDIALRSVANGSDNNIKVGDIMTSNPVVANKD 87

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  A +++ +  I  L  V+D +  +GIV   D+
Sbjct: 88  MDIHDAARIMSERQIRRL-PVEDNKNIVGIVSLGDI 122


>gi|158319584|ref|YP_001512091.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus oremlandii
           OhILAs]
 gi|158139783|gb|ABW18095.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus oremlandii
           OhILAs]
          Length = 485

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 7/99 (7%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILE 298
           DA+ +++  R   V + ++G KL GIIT  DI    N+ K ++    +D ++   + I  
Sbjct: 109 DALAVMARYRISGVPIAEKG-KLVGIITNRDIRFETNYKKKISEAMTKDNLVTAREGISM 167

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D     A ++L  H I  L +VDD     G++   D+ +
Sbjct: 168 DE----AQKILMAHKIEKLPIVDDKGMLKGLITIKDIEK 202


>gi|18313077|ref|NP_559744.1| hypothetical protein PAE2072 [Pyrobaculum aerophilum str. IM2]
 gi|18160583|gb|AAL63926.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 138

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 23/94 (24%), Positives = 48/94 (51%), Gaps = 2/94 (2%)

Query: 244 TILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           T L++ R G   +   D  ++   +++E DI R   + L+       +  +P  +L+   
Sbjct: 26  TELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSPITVLDTDP 85

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VA + +R+HNI  ++VV+   + +G++   DL
Sbjct: 86  VHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 119


>gi|255263911|ref|ZP_05343253.1| CBS domain containing protein [Thalassiobium sp. R2A62]
 gi|255106246|gb|EET48920.1| CBS domain containing protein [Thalassiobium sp. R2A62]
          Length = 144

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 4/96 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTL 301
           +LS+KR G V V   G +  GI++E DI R          T S  D+M  NP       +
Sbjct: 30  VLSKKRIGTVVVSASGSRADGILSERDIVRELGTRGVACMTDSAADIMTVNPVTCAPTDV 89

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V +  + Q     + VV D +  +G++   D+++
Sbjct: 90  ADVVLAKMTQGRFRHMPVVKDGE-MVGLITLGDVVK 124


>gi|238019127|ref|ZP_04599553.1| hypothetical protein VEIDISOL_00989 [Veillonella dispar ATCC 17748]
 gi|237863826|gb|EEP65116.1| hypothetical protein VEIDISOL_00989 [Veillonella dispar ATCC 17748]
          Length = 484

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 5/98 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           L DA  I+ + +   V + + G KL GIIT  D+   F  DL T  + D M K+  V   
Sbjct: 108 LSDAAEIMGKYKISGVPITEHG-KLVGIITNRDM--RFETDL-TRQIGDCMTKDSLVTAP 163

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E T L  A  +L +H I  L +VD      G++   D+
Sbjct: 164 EGTSLEEAKAILSEHRIEKLPLVDGDGNLKGLITIKDI 201


>gi|148260111|ref|YP_001234238.1| signal-transduction protein [Acidiphilium cryptum JF-5]
 gi|326402936|ref|YP_004283017.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
 gi|146401792|gb|ABQ30319.1| putative signal-transduction protein with CBS domains [Acidiphilium
           cryptum JF-5]
 gi|325049797|dbj|BAJ80135.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
          Length = 143

 Score = 36.2 bits (82), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 45/99 (45%), Gaps = 4/99 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILE 298
           A   L+ KR G   VVD+   L G+++E DI R    F  D+   +  D+M         
Sbjct: 27  AARFLTAKRIGAAPVVDDRGALVGMLSERDIMRFVGEFDGDIKDRTAADLMTTLVASCTP 86

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +  AM L+  H    L V +D   A G+V   DL++
Sbjct: 87  EATILDAMLLMTTHRCRHLPVFEDGVLA-GVVSIGDLVK 124


>gi|257880646|ref|ZP_05660299.1| transcriptional regulator [Enterococcus faecium 1,230,933]
 gi|257814874|gb|EEV43632.1| transcriptional regulator [Enterococcus faecium 1,230,933]
          Length = 272

 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 2/105 (1%)

Query: 58  EKIKAI--KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           E IK I     + I G+G SG+    L +     G  +  V           ++T +DL+
Sbjct: 113 EAIKMITQSKNIYIFGVGSSGNTSLDLENMFLRVGVQAKAVLDPHFQSQVASLLTVNDLV 172

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           I+ S SG + +    L  A++    +IAIT+   S +   AD+VL
Sbjct: 173 IIFSLSGKTKDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADLVL 217


>gi|219848345|ref|YP_002462778.1| CBS domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
          Length = 427

 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 12/111 (10%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVE-------- 286
           L  A  ++++     + VVD   +L GII+  D+ +    NF     TLS E        
Sbjct: 222 LAQAALVMTKNDHKRLPVVDNEGRLVGIISRSDLLQTVANNFAISGETLSAEFVTATTVG 281

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM ++  V+  DT L+  +  +        +V+D  ++ IGIV   D+LR
Sbjct: 282 EVMARDVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILR 332


>gi|27367524|ref|NP_763051.1| RpiR family transcriptional regulator [Vibrio vulnificus CMCP6]
 gi|320159376|ref|YP_004191754.1| sialic acid utilization regulator RpiR family [Vibrio vulnificus
           MO6-24/O]
 gi|27359096|gb|AAO08041.1| Transcriptional regulator, RpiR family [Vibrio vulnificus CMCP6]
 gi|319934688|gb|ADV89551.1| sialic acid utilization regulator RpiR family [Vibrio vulnificus
           MO6-24/O]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 73/157 (46%), Gaps = 12/157 (7%)

Query: 49  LSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           LS++  H AV+ +   + RV I GIG S      L+  L   G  +    A + SH  + 
Sbjct: 117 LSYEACHQAVQWLSEAR-RVQIVGIGGSALTAKDLSYKLLKLGITTL---AEQDSHVQIA 172

Query: 108 M---ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLP 163
           +   ++  D+ I +S+SG   E+      A+     +IA++S  KS +   AD+   T+ 
Sbjct: 173 VARTLSEQDVQIAISFSGERKEILVAAEAAKEQGAKVIALSSPKKSRLRQIADMTFDTIA 232

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            E E     +A  ++   Q  I D L I L++ R+ S
Sbjct: 233 DETEHRSSAIASRSA---QNVITDLLFIILVQLRDES 266


>gi|120598184|ref|YP_962758.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. W3-18-1]
 gi|146293742|ref|YP_001184166.1| inosine 5'-monophosphate dehydrogenase [Shewanella putrefaciens
           CN-32]
 gi|120558277|gb|ABM24204.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. W3-18-1]
 gi|145565432|gb|ABP76367.1| inosine-5'-monophosphate dehydrogenase [Shewanella putrefaciens
           CN-32]
 gi|319427116|gb|ADV55190.1| inosine-5'-monophosphate dehydrogenase [Shewanella putrefaciens
           200]
          Length = 488

 Score = 36.2 bits (82), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 5/87 (5%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQL 308
           F    VV+E  +L GIIT  D+   F  D +  +VE+VM    +++   E T L    +L
Sbjct: 118 FAGYPVVNEANELVGIITGRDV--RFVTDWSK-TVEEVMTPKSRLVTVAEGTKLDEVQKL 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  + I  ++VVDD  K  G++   D 
Sbjct: 175 MHSNRIEKVLVVDDNFKLKGLITVKDF 201


>gi|320200125|gb|EFW74714.1| Putative transcriptional regulator [Escherichia coli EC4100B]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|309810928|ref|ZP_07704728.1| inosine-5'-monophosphate dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308435082|gb|EFP58914.1| inosine-5'-monophosphate dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 508

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 78/196 (39%), Gaps = 17/196 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D VL LP E +  P  +  T     ++ +   L  A +++   +     +   GG +G L
Sbjct: 23  DDVLLLPGETDVIPSEVDTTAQLTREITLNIPLVSAAMDTVTEARMAIAMAREGG-MGVL 81

Query: 217 F--VCASDVMHSGDSIPLVKIGCPLIDAITILSEK------------RFGCVAVVDEGQK 262
              +   D  +  D +   + G  + + +TI  +K            R   + VV E   
Sbjct: 82  HRNLSIEDQAYQVDLVKRTQTGR-ITNPVTIGPDKTLEELDAICGQYRVSGLPVVVEDDT 140

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVD 321
           L G+IT  D+      +  T  V DVM   P V    D     A  +LRQH    L +VD
Sbjct: 141 LVGMITNRDLRFTPVAEWATTKVRDVMTPQPLVTAPVDISNDDATAILRQHKRERLPLVD 200

Query: 322 DCQKAIGIVHFLDLLR 337
           D  + + ++   D ++
Sbjct: 201 DDGRLVALITVKDFVK 216


>gi|308270292|emb|CBX26904.1| hypothetical protein N47_A09330 [uncultured Desulfobacterium sp.]
          Length = 216

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVIL 297
           + +AI ++       + VV + + LKG IT   + +   H  +  LS+ D++IK+P  + 
Sbjct: 34  ITEAIDLMKVNSIRHLPVVGKNKTLKGFITLSVLKQGLVHTMIGDLSLNDLIIKSPITVS 93

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D  + VA Q +  H I  + VV    K +GI+   D+L
Sbjct: 94  PDEDIEVAAQKIYNHKIGGMPVV-KGNKLVGIITVTDIL 131


>gi|308175127|ref|YP_003921832.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Bacillus amyloliquefaciens DSM 7]
 gi|307607991|emb|CBI44362.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Bacillus amyloliquefaciens DSM 7]
 gi|328555096|gb|AEB25588.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Bacillus amyloliquefaciens TA208]
 gi|328913451|gb|AEB65047.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Bacillus amyloliquefaciens LL3]
          Length = 379

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 27/46 (58%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           VE +M K P  +  D  L+ A+Q++R+H +  L+VVDD     G V
Sbjct: 251 VEQMMNKKPVTVTADKTLSHAIQVMREHRVDSLLVVDDLNVLQGYV 296


>gi|302348246|ref|YP_003815884.1| 6-Phospho-3-hexuloisomerase (PHI) [Acidilobus saccharovorans
           345-15]
 gi|302328658|gb|ADL18853.1| 6-Phospho-3-hexuloisomerase (PHI) [Acidilobus saccharovorans
           345-15]
          Length = 203

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 5/100 (5%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KG+ ++ G G+SG +G   A  L   G  S+ +            I++ D+ I +S SG 
Sbjct: 44  KGKALVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVPS-----ISKGDVAIAISGSGR 98

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           +  +      A++    +IAIT+  +S +   AD+V+ +P
Sbjct: 99  TGLIVDAADAAKKVGAYVIAITTFPESPLGSIADLVVRIP 138


>gi|294495024|ref|YP_003541517.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Methanohalophilus mahii DSM 5219]
 gi|292666023|gb|ADE35872.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Methanohalophilus mahii DSM 5219]
          Length = 382

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 60/130 (46%), Gaps = 8/130 (6%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           ND+      G   T  + A ++M   D  P+V     L  A+ ++ +     + VVD+ +
Sbjct: 237 NDYVSKFVAGVDKTKILTAENIMKRPD--PVVSFKSGLQVALKLMEKHGISSIYVVDKAK 294

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L+G +   D  R   K   T+  EDV+IK  PK  L+  L  +    +R      + +V
Sbjct: 295 RLQGFLKADDAVRA-QKAGKTM--EDVIIKEFPKTTLDTPLQDLIS--IRAETDQPIAIV 349

Query: 321 DDCQKAIGIV 330
           ++  K +G+V
Sbjct: 350 NENDKLVGVV 359


>gi|161486148|ref|NP_754966.2| putative DNA-binding transcriptional regulator [Escherichia coli
           CFT073]
 gi|218701074|ref|YP_002408703.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI39]
 gi|227887595|ref|ZP_04005400.1| DNA-binding transcriptional regulator [Escherichia coli 83972]
 gi|300982264|ref|ZP_07175975.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|301047199|ref|ZP_07194291.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|312965476|ref|ZP_07779708.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 2362-75]
 gi|331684210|ref|ZP_08384806.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
 gi|218371060|emb|CAR18887.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli IAI39]
 gi|227835945|gb|EEJ46411.1| DNA-binding transcriptional regulator [Escherichia coli 83972]
 gi|281179610|dbj|BAI55940.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300300876|gb|EFJ57261.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|300408818|gb|EFJ92356.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|307554580|gb|ADN47355.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           ABU 83972]
 gi|312289896|gb|EFR17784.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 2362-75]
 gi|315292464|gb|EFU51816.1| transcriptional regulator, RpiR family [Escherichia coli MS 153-1]
 gi|320196397|gb|EFW71021.1| Putative transcriptional regulator [Escherichia coli WV_060327]
 gi|323188324|gb|EFZ73616.1| hypothetical protein ECRN5871_3430 [Escherichia coli RN587/1]
 gi|324008469|gb|EGB77688.1| transcriptional regulator, RpiR family [Escherichia coli MS 57-2]
 gi|330912332|gb|EGH40842.1| putative transcriptional regulator [Escherichia coli AA86]
 gi|331079162|gb|EGI50364.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|110636213|ref|YP_676421.1| signal-transduction protein [Mesorhizobium sp. BNC1]
 gi|110287197|gb|ABG65256.1| putative signal-transduction protein with CBS domains
           [Chelativorans sp. BNC1]
          Length = 217

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 18/114 (15%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----------------NFHKDLNTLS 284
           A  I+  K    + V+D+GQ + G++TEGD+ R                   +    +  
Sbjct: 23  AAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELGTPLGDEGAQERARAYVQSRSWK 82

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  +M      I ED  L+    LL  H I  L V+ D Q  +GIV   DLL+ 
Sbjct: 83  VGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRDTQ-LVGIVSRADLLKV 135


>gi|89109367|ref|AP_003147.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. W3110]
 gi|90111460|ref|NP_417056.2| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|157162038|ref|YP_001459356.1| putative DNA-binding transcriptional regulator [Escherichia coli
           HS]
 gi|161367545|ref|NP_289117.2| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 EDL933]
 gi|161984881|ref|YP_408960.2| DNA-binding transcriptional regulator [Shigella boydii Sb227]
 gi|161986474|ref|YP_311503.2| putative DNA-binding transcriptional regulator [Shigella sonnei
           Ss046]
 gi|162139764|ref|NP_311454.2| DNA-binding transcriptional regulator [Escherichia coli O157:H7
           str. Sakai]
 gi|168748371|ref|ZP_02773393.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|168757780|ref|ZP_02782787.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|168761180|ref|ZP_02786187.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|168768663|ref|ZP_02793670.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|168773515|ref|ZP_02798522.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|168778536|ref|ZP_02803543.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|168787919|ref|ZP_02812926.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|168798941|ref|ZP_02823948.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|170082171|ref|YP_001731491.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
           substr. DH10B]
 gi|170680195|ref|YP_001744750.1| putative DNA-binding transcriptional regulator [Escherichia coli
           SMS-3-5]
 gi|187730894|ref|YP_001881340.1| putative DNA-binding transcriptional regulator [Shigella boydii CDC
           3083-94]
 gi|188495750|ref|ZP_03003020.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|194432112|ref|ZP_03064401.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
 gi|194437665|ref|ZP_03069761.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|195936708|ref|ZP_03082090.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809207|ref|ZP_03251544.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208813585|ref|ZP_03254914.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208821469|ref|ZP_03261789.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209398568|ref|YP_002272035.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209920040|ref|YP_002294124.1| putative DNA-binding transcriptional regulator [Escherichia coli
           SE11]
 gi|217326864|ref|ZP_03442947.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218696188|ref|YP_002403855.1| putative DNA-binding transcriptional regulator [Escherichia coli
           55989]
 gi|218706064|ref|YP_002413583.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UMN026]
 gi|238901726|ref|YP_002927522.1| putative DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|253772541|ref|YP_003035372.1| DNA-binding transcriptional regulator [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162536|ref|YP_003045644.1| putative DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|254794510|ref|YP_003079347.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|256017290|ref|ZP_05431155.1| putative DNA-binding transcriptional regulator [Shigella sp. D9]
 gi|256021754|ref|ZP_05435619.1| putative DNA-binding transcriptional regulator [Escherichia sp.
           4_1_40B]
 gi|260856655|ref|YP_003230546.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|260869248|ref|YP_003235650.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|261223003|ref|ZP_05937284.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259446|ref|ZP_05951979.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283786|ref|YP_003500604.1| hypothetical protein G2583_3092 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406003|ref|ZP_06649995.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1412]
 gi|293410976|ref|ZP_06654552.1| DNA-binding transcriptional regulator [Escherichia coli B354]
 gi|293415830|ref|ZP_06658473.1| DNA-binding transcriptional regulator [Escherichia coli B185]
 gi|293446915|ref|ZP_06663337.1| DNA-binding transcriptional regulator [Escherichia coli B088]
 gi|298381803|ref|ZP_06991402.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1302]
 gi|300817662|ref|ZP_07097877.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|300820761|ref|ZP_07100911.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300898324|ref|ZP_07116672.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300904256|ref|ZP_07122115.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300920729|ref|ZP_07137135.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300927062|ref|ZP_07142814.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300927687|ref|ZP_07143255.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300935693|ref|ZP_07150663.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300951721|ref|ZP_07165540.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300958798|ref|ZP_07170910.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|301024848|ref|ZP_07188485.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|301302927|ref|ZP_07209055.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|301330337|ref|ZP_07222984.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|301648325|ref|ZP_07248065.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|307139197|ref|ZP_07498553.1| putative DNA-binding transcriptional regulator [Escherichia coli
           H736]
 gi|307313868|ref|ZP_07593484.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|312973193|ref|ZP_07787365.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 1827-70]
 gi|331669310|ref|ZP_08370158.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|1175983|sp|P37767|YFHH_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator
           yfhH
 gi|85675452|dbj|BAE76737.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K12 substr. W3110]
 gi|87082130|gb|AAC75614.2| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|157067718|gb|ABV06973.1| transcriptional regulator, RpiR family [Escherichia coli HS]
 gi|169890006|gb|ACB03713.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170517913|gb|ACB16091.1| transcriptional regulator, RpiR family [Escherichia coli SMS-3-5]
 gi|187427886|gb|ACD07160.1| transcriptional regulator, RpiR family [Shigella boydii CDC
           3083-94]
 gi|187770731|gb|EDU34575.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|188017161|gb|EDU55283.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|188490949|gb|EDU66052.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|189003190|gb|EDU72176.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|189355280|gb|EDU73699.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|189362180|gb|EDU80599.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|189368389|gb|EDU86805.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|189372295|gb|EDU90711.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|189378618|gb|EDU97034.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|194419641|gb|EDX35721.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
 gi|194423471|gb|EDX39462.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|208729008|gb|EDZ78609.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208734862|gb|EDZ83549.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208741592|gb|EDZ89274.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209159968|gb|ACI37401.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209913299|dbj|BAG78373.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|217319231|gb|EEC27656.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218352920|emb|CAU98719.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli 55989]
 gi|218433161|emb|CAR14057.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli UMN026]
 gi|238862317|gb|ACR64315.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|242378162|emb|CAQ32936.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|253323585|gb|ACT28187.1| transcriptional regulator, RpiR family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974437|gb|ACT40108.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|253978604|gb|ACT44274.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|254593910|gb|ACT73271.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|257755304|dbj|BAI26806.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|257765604|dbj|BAI37099.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|260448359|gb|ACX38781.1| transcriptional regulator, RpiR family [Escherichia coli DH1]
 gi|290763659|gb|ADD57620.1| hypothetical protein G2583_3092 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323745|gb|EFE63173.1| DNA-binding transcriptional regulator [Escherichia coli B088]
 gi|291428211|gb|EFF01238.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1412]
 gi|291433478|gb|EFF06457.1| DNA-binding transcriptional regulator [Escherichia coli B185]
 gi|291471444|gb|EFF13928.1| DNA-binding transcriptional regulator [Escherichia coli B354]
 gi|298279245|gb|EFI20759.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1302]
 gi|300314546|gb|EFJ64330.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300357986|gb|EFJ73856.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300396379|gb|EFJ79917.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|300403789|gb|EFJ87327.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300412300|gb|EFJ95610.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300416946|gb|EFK00257.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300449005|gb|EFK12625.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300459127|gb|EFK22620.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300464240|gb|EFK27733.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300526514|gb|EFK47583.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300529650|gb|EFK50712.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|300841862|gb|EFK69622.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|300843671|gb|EFK71431.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|301073601|gb|EFK88407.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|306906369|gb|EFN36884.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|310331788|gb|EFP99023.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 1827-70]
 gi|315061880|gb|ADT76207.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           W]
 gi|315137185|dbj|BAJ44344.1| hypothetical protein ECDH1ME8569_2488 [Escherichia coli DH1]
 gi|315256588|gb|EFU36556.1| transcriptional regulator, RpiR family [Escherichia coli MS 85-1]
 gi|315615823|gb|EFU96455.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 3431]
 gi|320176137|gb|EFW51204.1| putative transcriptional regulator [Shigella dysenteriae CDC
           74-1112]
 gi|320186360|gb|EFW61094.1| Putative transcriptional regulator [Shigella flexneri CDC 796-83]
 gi|320188902|gb|EFW63561.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640910|gb|EFX10398.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. G5101]
 gi|320646352|gb|EFX15279.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H- str. 493-89]
 gi|320651532|gb|EFX19919.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H- str. H 2687]
 gi|320657243|gb|EFX25052.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662849|gb|EFX30181.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667653|gb|EFX34568.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323156219|gb|EFZ42378.1| hypothetical protein ECEPECA14_1996 [Escherichia coli EPECa14]
 gi|323169457|gb|EFZ55130.1| hypothetical protein SS53G_0209 [Shigella sonnei 53G]
 gi|323177309|gb|EFZ62897.1| hypothetical protein ECOK1180_3795 [Escherichia coli 1180]
 gi|323184559|gb|EFZ69933.1| hypothetical protein ECOK1357_2109 [Escherichia coli 1357]
 gi|323377539|gb|ADX49807.1| transcriptional regulator, RpiR family [Escherichia coli KO11]
 gi|323941176|gb|EGB37361.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E482]
 gi|323944618|gb|EGB40686.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H120]
 gi|323961176|gb|EGB56789.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H489]
 gi|323968009|gb|EGB63421.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli M863]
 gi|323971113|gb|EGB66360.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TA007]
 gi|324020019|gb|EGB89238.1| transcriptional regulator, RpiR family [Escherichia coli MS 117-3]
 gi|324118229|gb|EGC12125.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1167]
 gi|326340367|gb|EGD64171.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           1125]
 gi|326345050|gb|EGD68794.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           1044]
 gi|327252271|gb|EGE63943.1| hypothetical protein ECSTEC7V_3119 [Escherichia coli STEC_7v]
 gi|331064504|gb|EGI36415.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|332088013|gb|EGI93138.1| hypothetical protein SB521682_2946 [Shigella boydii 5216-82]
 gi|332089799|gb|EGI94900.1| hypothetical protein SD15574_2972 [Shigella dysenteriae 155-74]
 gi|332092600|gb|EGI97672.1| hypothetical protein SB359474_2981 [Shigella boydii 3594-74]
 gi|332344436|gb|AEE57770.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 282

 Score = 36.2 bits (82), Expect = 8.4,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|228992723|ref|ZP_04152649.1| CBS domain containing protein [Bacillus pseudomycoides DSM 12442]
 gi|228998767|ref|ZP_04158353.1| CBS domain containing protein [Bacillus mycoides Rock3-17]
 gi|229006283|ref|ZP_04163967.1| CBS domain containing protein [Bacillus mycoides Rock1-4]
 gi|228754929|gb|EEM04290.1| CBS domain containing protein [Bacillus mycoides Rock1-4]
 gi|228760942|gb|EEM09902.1| CBS domain containing protein [Bacillus mycoides Rock3-17]
 gi|228767055|gb|EEM15692.1| CBS domain containing protein [Bacillus pseudomycoides DSM 12442]
          Length = 147

 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 8/92 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
           V   D+M S + +  V+IG  L  A+ +L +  +  + V+D   KL G+I+   I     
Sbjct: 12  VLVKDLMISSEKVAHVQIGNSLEHALLVLVKSGYSAIPVLDPMYKLHGLISTAMILDGIL 71

Query: 274 ---RNFHKDLNTLSVEDVMIKN-PKVILEDTL 301
              R   + L  + VE+VM K+ P + LED+ 
Sbjct: 72  GLERIEFEKLEDMKVENVMKKDIPNLGLEDSF 103


>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 260

 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 29/130 (22%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------------------FR 274
           +A+ +L EKR   + V+D+   L G++++ D+                          F+
Sbjct: 108 EALEVLVEKRITGMPVIDDFGALVGVVSDYDLLALDSISGQRQPETSLFPEAGRTWKAFK 167

Query: 275 NFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              K L   N  +V DVM  +P V+ E T L  A ++L       L VV D  K +G++ 
Sbjct: 168 EIQKLLIKTNGKTVGDVMTPSPLVVSEQTNLEDAARVLLDTKFRRLPVVGDDGKLVGLLT 227

Query: 332 FLDLLRFGII 341
             +++R  ++
Sbjct: 228 RGNVVRAALV 237


>gi|15897103|ref|NP_341708.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus P2]
 gi|284174344|ref|ZP_06388313.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus 98/2]
 gi|13813282|gb|AAK40498.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus P2]
 gi|261601765|gb|ACX91368.1| 6-phospho 3-hexuloisomerase [Sulfolobus solfataricus 98/2]
          Length = 209

 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V++ G G+SG +G   A  L   G  S+ +         +  I ++D+++ +S SG +
Sbjct: 51  GKVLVMGAGRSGLVGRAFAMRLLHLGFNSYVL-----GETIVPAIGKNDIVVAISGSGRT 105

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
             +      A+     LI+ITS   S +A  +D+V+ +P
Sbjct: 106 KLILTAAEAAKEAGAKLISITSYFDSPLAKISDVVIEIP 144


>gi|20092886|ref|NP_618961.1| hypothetical protein MA4093 [Methanosarcina acetivorans C2A]
 gi|19918193|gb|AAM07441.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 284

 Score = 36.2 bits (82), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + IL  K    V V+ +  K+ GI+T  ++ +N  ++   L    +M ++P  I   +
Sbjct: 26  EVLKILKNKHISGVPVLKDS-KVVGIVTRTNLLQNPEEEQLAL----LMTRDPITISPGS 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L  A +LL QH I  L VVDD  K +G+V   D++
Sbjct: 81  DLQTAARLLLQHGIRRLPVVDDG-KLVGLVTVADVV 115


>gi|289550084|ref|YP_003470988.1| Transcriptional regulator, RpiR family [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659284|ref|ZP_07912148.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus lugdunensis M23590]
 gi|289179616|gb|ADC86861.1| Transcriptional regulator, RpiR family [Staphylococcus lugdunensis
           HKU09-01]
 gi|315495709|gb|EFU84040.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus lugdunensis M23590]
          Length = 290

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 2/155 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +R  +++  S Q    +      +++K  K  + + G G S      +    +  G    
Sbjct: 101 QRAANAINKSTQAIKPYAIDQMCKQLKRAKT-IYVFGYGASYVCALDIYQKFSRIGLNVQ 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V         L   ++ D I+ ++ +G   EL+A++   + + IP++ +TS   + VA 
Sbjct: 160 VVQETHMLTTQLSTHSQSDCILFITNNGDQSELQALVKVIKDYHIPIMTVTSHKHNPVAQ 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +++VL      E+    +  TTS   Q+   D L
Sbjct: 220 ASEVVLVYGNSDEN-ELRMGATTSLFAQMYTIDTL 253


>gi|297568231|ref|YP_003689575.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924146|gb|ADH84956.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 228

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 13/114 (11%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTL 283
              L+ A  I+ E     + VV  G KL GI+T+ D+                +  L+ +
Sbjct: 17  NTSLMRATRIMKENNIRRLPVVSHG-KLIGIVTDRDVKDASPSKTATLDIHELYYLLSEM 75

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V+DVM  +P  +     L +A  ++ +  IS L VVD+  +  G++   DLLR
Sbjct: 76  KVKDVMTASPLTLKGKDSLELAAVIMLEDKISGLPVVDESGRLTGLLSETDLLR 129


>gi|302878075|ref|YP_003846639.1| inosine-5'-monophosphate dehydrogenase [Gallionella
           capsiferriformans ES-2]
 gi|302580864|gb|ADL54875.1| inosine-5'-monophosphate dehydrogenase [Gallionella
           capsiferriformans ES-2]
          Length = 486

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 22/81 (27%), Positives = 47/81 (58%), Gaps = 5/81 (6%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISV 316
           +G+++ GI+T  D+   F  +L+   ++++M    ++I   E+T L  A  L+ +H I  
Sbjct: 124 QGKQVVGIVTNRDL--RFENNLDQ-PIQNIMTPRERLITVKENTSLEDARNLMHKHRIER 180

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           ++VV+D  +  G++   D+L+
Sbjct: 181 VLVVNDAFELCGLMTVKDILK 201


>gi|28973655|gb|AAO64148.1| unknown protein [Arabidopsis thaliana]
          Length = 536

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 7/105 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNT--LSVEDVMIKN 292
           G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  VM +N
Sbjct: 76  GTTVFDACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTPVSKVMTRN 135

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 136 PIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITK 176


>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
 gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
           EAN1pec]
          Length = 139

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---H 277
           +DVM    +   V +  P+ +A   +     G V V+D   ++ GI+T+ DI        
Sbjct: 6   ADVMTRNPAT--VGMDQPIAEAARRMKTVNAGDVIVLDNTGRVAGIVTDRDITLRVVAEG 63

Query: 278 KDLNTLSVEDVMIKNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +D    +  +V  +   + I  DT    A+QL+R+ +I  L VVD   + +G++   DL 
Sbjct: 64  RDPERTATREVCTQTGLITIAPDTTTDTAVQLIRERHIRRLPVVDKG-RPVGVISLGDLA 122

Query: 337 R 337
           R
Sbjct: 123 R 123


>gi|189346991|ref|YP_001943520.1| inosine-5'-monophosphate dehydrogenase [Chlorobium limicola DSM
           245]
 gi|189341138|gb|ACD90541.1| inosine-5'-monophosphate dehydrogenase [Chlorobium limicola DSM
           245]
          Length = 497

 Score = 35.8 bits (81), Expect = 8.5,   Method: Compositional matrix adjust.
 Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           D  +KLKGI+T  D+      D    ++  +  KN     ED  L  A ++L ++ I  L
Sbjct: 132 DTSKKLKGIVTNRDLRIKPSLDAGIATI--MTSKNLITAREDVDLETAEKILLKNKIEKL 189

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
           ++VDD     G++ F D+ +
Sbjct: 190 LIVDDENNLKGLITFKDIQK 209


>gi|309702893|emb|CBJ02224.1| RpiR-family transcriptional regulator [Escherichia coli ETEC
           H10407]
 gi|323936301|gb|EGB32592.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1520]
          Length = 282

 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|296134271|ref|YP_003641518.1| Nucleotidyl transferase [Thermincola sp. JR]
 gi|296032849|gb|ADG83617.1| Nucleotidyl transferase [Thermincola potens JR]
          Length = 355

 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LVK   PL +++  + +     + VVD+  ++ G++T+GDI R    +++    +  VM 
Sbjct: 9   LVKADLPLRESLRQMDKGARQLLIVVDDDNRILGVVTDGDIRRAIINNIDFEAPIGQVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            NP  +        A++++R+ +I  + VV++  + + I+ + +LL  G
Sbjct: 69  PNPITLGCPVNHKKALKIMRERSIKHIPVVNEDGQVVDILIWSNLLGKG 117


>gi|52143190|ref|YP_083639.1| RpiR family transcriptional regulator [Bacillus cereus E33L]
 gi|51976659|gb|AAU18209.1| transcriptional regulator, RpiR family [Bacillus cereus E33L]
          Length = 176

 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 12/142 (8%)

Query: 58  EKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL---GMITRD 112
           + +KA++   R+   G G SG I +        TG       A   SH  +    +++++
Sbjct: 17  QAVKALQEANRIEFYGNGGSGIIATDAYHKFMRTGISCI---AHTDSHFQIMGAALLSKN 73

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPH 171
            ++I +S SGS+  L   L  A+     +IAITS  KS ++   DI L T  +E E    
Sbjct: 74  SVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRETEFRTE 133

Query: 172 GLAPTTSAIMQLAIGDALAIAL 193
               ++S + QL++ D L + L
Sbjct: 134 ---ASSSRLAQLSLIDTLYVGL 152


>gi|116747758|ref|YP_844445.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 230

 Score = 35.8 bits (81), Expect = 8.6,   Method: Compositional matrix adjust.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 13/112 (11%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------VEDVM 289
           A++++ E +   + VV  G KL G++++ D+ R    D  TL             V+D+M
Sbjct: 23  AMSLMKEHKIRMLPVVARG-KLVGVVSDTDLKRASASDATTLDMHELLYLISKIKVQDIM 81

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            K P  + ++  +    +LL +  IS   V+DD    +G++   DL +  I+
Sbjct: 82  TKTPITVSQNFTVEETAELLMRKKISGCPVLDDDGLVVGVITRDDLFKVLIM 133


>gi|323170156|gb|EFZ55809.1| hypothetical protein ECLT68_5044 [Escherichia coli LT-68]
          Length = 282

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 34/150 (22%), Positives = 62/150 (41%), Gaps = 24/150 (16%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--------- 145
            V    A    +   + DDL++ +S++G   EL        R    ++AIT         
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 146 --------------SENKSVVACHADIVLT 161
                         + + S+ ACHA  +LT
Sbjct: 223 RASHCLYTIAEEQATNSASISACHAQGMLT 252


>gi|320582667|gb|EFW96884.1| Activating gamma subunit of the AMP-activated Snf1p kinase complex
           [Pichia angusta DL-1]
          Length = 680

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDV 288
           V++  P++D I +L       V +VDE  KL  +    D+        + DL +LSV + 
Sbjct: 562 VRMETPVMDVIHMLISHSVSSVPIVDEQNKLVNVYEAVDVLSLIKGGMYADL-SLSVGEA 620

Query: 289 MIKNPK-------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++K            L+D L  V ++ +R+  +  L +VDD  + +G++   D+L++
Sbjct: 621 LMKRSDDFEGVYTCTLKDNLC-VILETIRKSRLHRLFLVDDEGRLVGVLTLSDILKY 676


>gi|254519504|ref|ZP_05131560.1| helix-turn-helix protein RpiR:Sugar isomerase [Clostridium sp.
           7_2_43FAA]
 gi|226913253|gb|EEH98454.1| helix-turn-helix protein RpiR:Sugar isomerase [Clostridium sp.
           7_2_43FAA]
          Length = 266

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 61/140 (43%), Gaps = 3/140 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S Q   A+E I++   R+   G+G SG    +  S     G     +  +        + 
Sbjct: 101 SNQLRMAIEFIQS-SNRLFFYGVGASGLAAYEAQSRFIRMGKTGLSITDSHFQLMYSSVC 159

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             +D+II LS SG + ++   L  A++    +IAIT+   S VA  AD VL L    E+ 
Sbjct: 160 DENDVIIALSLSGYTKDIIESLKVAKKQKAKIIAITNYALSPVAQIADCVL-LTAGKENL 218

Query: 170 PHGLAPTTSAIMQLAIGDAL 189
             G     S I QL I D L
Sbjct: 219 LDG-GSLISKISQLYIIDLL 237


>gi|206901430|ref|YP_002250654.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
 gi|206740533|gb|ACI19591.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
          Length = 214

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 16/112 (14%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-------------IFRNFHKDLNTLSV 285
           +++A  I+   +   + V D+G KL GI+TE D             IF   +  L  L V
Sbjct: 20  ILEAWKIMQNSQIRRLLVRDKG-KLVGIVTERDLRSVSPSQATSLSIFE-INYLLEKLKV 77

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D M  NP  +  D  +  A  ++R + IS L V+++ +  +GI+   D+ R
Sbjct: 78  KDAMTPNPITVDADAPIEEAALIMRDNKISALPVIENGE-VVGIITESDIFR 128


>gi|254393775|ref|ZP_05008892.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294814613|ref|ZP_06773256.1| CBS domain containing membrane protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442999|ref|ZP_08217733.1| hypothetical protein SclaA2_18128 [Streptomyces clavuligerus ATCC
           27064]
 gi|197707379|gb|EDY53191.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327212|gb|EFG08855.1| CBS domain containing membrane protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 210

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 2/99 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G    +   +L E     V VVDE ++  G+++E D+ R         + E +M  +
Sbjct: 17  VQRGTAFKEIARLLDEYGITAVPVVDEDERPVGVVSEADLLRRQTSRTTAGTAEGLMT-S 75

Query: 293 PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIV 330
           P ++ E     V A +++ +  I  L VVD   +  G+V
Sbjct: 76  PAIVAEPEWSVVRAARVMEEKRIKRLPVVDGEGRLTGVV 114


>gi|206978061|ref|ZP_03238945.1| CBS domain protein [Bacillus cereus H3081.97]
 gi|217961470|ref|YP_002340038.1| CBS domain protein [Bacillus cereus AH187]
 gi|222097432|ref|YP_002531489.1| cbs domain protein [Bacillus cereus Q1]
 gi|229140713|ref|ZP_04269261.1| CBS domain containing protein [Bacillus cereus BDRD-ST26]
 gi|206743688|gb|EDZ55111.1| CBS domain protein [Bacillus cereus H3081.97]
 gi|217066864|gb|ACJ81114.1| CBS domain protein [Bacillus cereus AH187]
 gi|221241490|gb|ACM14200.1| CBS domain protein [Bacillus cereus Q1]
 gi|228642785|gb|EEK99068.1| CBS domain containing protein [Bacillus cereus BDRD-ST26]
          Length = 147

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 10/101 (9%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  +   +FV   D+M S + +  V+IG  L  A+ +L +  +  + V+D   KL G+I+
Sbjct: 5   PKDEFQQIFV--KDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPTYKLHGLIS 62

Query: 269 EGDIF-------RNFHKDLNTLSVEDVMIKN-PKVILEDTL 301
              I        R   + L+ + VE VM K+ P + LED+ 
Sbjct: 63  TAMILDGMLGLERIEFERLDEMKVEQVMKKDIPVLKLEDSF 103


>gi|149173046|ref|ZP_01851677.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
 gi|148847852|gb|EDL62184.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
          Length = 144

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 3/96 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVMIKNPKVILEDTLL 302
           ++ +  G + V+DE     G+IT+ D+  R   K  +++   V +VM + P  + E+T +
Sbjct: 27  MNSRNVGTLIVLDEESHPIGMITDRDLALRIVGKARDSIQTLVSEVMTRFPDNVNEETTI 86

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +A+  +R      L VVD+  K +G++   D+L  
Sbjct: 87  ELALSKMRAGGFRKLPVVDNEGKLVGVLTLDDILEL 122


>gi|157959881|ref|YP_001499915.1| nucleotidyl transferase [Shewanella pealeana ATCC 700345]
 gi|157844881|gb|ABV85380.1| Nucleotidyl transferase [Shewanella pealeana ATCC 700345]
          Length = 351

 Score = 35.8 bits (81), Expect = 8.7,   Method: Compositional matrix adjust.
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           L+K    ++DA+ ++  +      VV+  QKL G+IT+GDI R     LN LS++
Sbjct: 9   LIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGI---LNNLSLD 60


>gi|302518377|ref|ZP_07270719.1| transcriptional regulator [Streptomyces sp. SPB78]
 gi|318056378|ref|ZP_07975101.1| transcriptional regulator [Streptomyces sp. SA3_actG]
 gi|318075721|ref|ZP_07983053.1| transcriptional regulator [Streptomyces sp. SA3_actF]
 gi|302427272|gb|EFK99087.1| transcriptional regulator [Streptomyces sp. SPB78]
          Length = 305

 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+G SG +G  L   L   G  +F      A+     ++   D+ I +S +GS+ +  
Sbjct: 158 IFGLGASGFVGGDLHQKLHRIGHMAFVWTDGHAALTASALLGEGDVAIGISHTGSTVDTL 217

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A       IA+T+  +S +A  AD+VLT        P     T S I QLA+ D 
Sbjct: 218 EPLQAAGERGATTIALTNFARSPMAECADLVLTTAV--REMPFRSGATASRIAQLAVVDC 275

Query: 189 LAIALLESRNFSEN 202
           L + + + ++++E+
Sbjct: 276 LFVGVAQ-KSYAES 288


>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
 gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
          Length = 143

 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +IDAI +++EK  G V V+D G +L GI++E D  R      +     +V ++M      
Sbjct: 24  VIDAIRLMAEKGIGAVLVMD-GARLVGILSERDYARKIVLRDRSSRDTAVAEIMTAQVVT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     +   +QL+  + I  L VV+  Q  +G++   DL++
Sbjct: 83  VSPGEQVEHCLQLVTDYRIRHLPVVEGAQ-VLGVISIGDLVK 123


>gi|227828247|ref|YP_002830027.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.14.25]
 gi|227831005|ref|YP_002832785.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus L.S.2.15]
 gi|229579885|ref|YP_002838284.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.G.57.14]
 gi|229581456|ref|YP_002839855.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.N.15.51]
 gi|229585475|ref|YP_002843977.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.27]
 gi|238620439|ref|YP_002915265.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.4]
 gi|227457453|gb|ACP36140.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus L.S.2.15]
 gi|227460043|gb|ACP38729.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.14.25]
 gi|228010600|gb|ACP46362.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.G.57.14]
 gi|228012172|gb|ACP47933.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.N.15.51]
 gi|228020525|gb|ACP55932.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.27]
 gi|238381509|gb|ACR42597.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.4]
 gi|323475314|gb|ADX85920.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus REY15A]
 gi|323478040|gb|ADX83278.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus HVE10/4]
          Length = 209

 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+V++ G G+SG +G   A  L   G  S+ +         +  I ++D+++ +S SG +
Sbjct: 51  GKVLVMGAGRSGLVGRAFAMRLLHLGFNSYVL-----GETIVPAIGKNDIVVAISGSGRT 105

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
             +      A+     LI+ITS   S +A  +D+V+ +P
Sbjct: 106 KLILTAAEAAKEAGAKLISITSYFDSPLAKISDVVIEIP 144


>gi|149927334|ref|ZP_01915590.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
 gi|149824048|gb|EDM83271.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
          Length = 619

 Score = 35.8 bits (81), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 5/104 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLN-TLSVEDVMIKNPK 294
           P+ +A   +++     V V DE Q L GI+T+ D FR+    K L  +  +  +M ++P 
Sbjct: 168 PVQEAAVQMAQSNQTAVIVQDESQSLIGIVTDQD-FRDRVVAKGLPYSTPIRHIMTESPG 226

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  + L+  AM L+ ++N   + V+ + +  +G+V   DL+++
Sbjct: 227 TVNHNQLVFEAMMLMLRNNTQHVPVLKNSE-VVGMVSQSDLVKY 269


>gi|325959952|ref|YP_004291418.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325331384|gb|ADZ10446.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 278

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 29/104 (27%), Positives = 55/104 (52%), Gaps = 12/104 (11%)

Query: 241 DAITILSEKRFGC----VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV----EDVMIKN 292
           D++  ++EK        + +V+EG +L G++T  D+    +K L  + +    ED MI+N
Sbjct: 78  DSVKTVAEKMINNNIRRIPIVEEG-RLVGLVTASDLV---NKALWKMEIQEPAEDYMIQN 133

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                E T L VA +++R + + VL+ +++  K  GI+   D +
Sbjct: 134 IPTSWEGTPLNVAFEIMRYYRLKVLLGLNNDGKLTGILTETDFI 177


>gi|319648528|ref|ZP_08002743.1| inosine-5'-monophosphate dehydrogenase [Bacillus sp. BT1B_CT2]
 gi|317389376|gb|EFV70188.1| inosine-5'-monophosphate dehydrogenase [Bacillus sp. BT1B_CT2]
          Length = 508

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           + DA  ++ + R   V +VD  E QKL GIIT  D+   F  D  ++ + DVM K   V 
Sbjct: 128 VFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDL--RFISDY-SMKISDVMTKEELVT 184

Query: 297 LE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               T L  A ++L+++ I  L ++DD     G++   D+
Sbjct: 185 APVGTTLDEAEKILQKYKIEKLPLLDDQGVLKGLITIKDI 224


>gi|301063589|ref|ZP_07204106.1| inosine-5'-monophosphate dehydrogenase [delta proteobacterium
           NaphS2]
 gi|300442321|gb|EFK06569.1| inosine-5'-monophosphate dehydrogenase [delta proteobacterium
           NaphS2]
          Length = 487

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 13/103 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVEDVMIKNPKV 295
           + + I+ + +   V VV EG+ L GIIT  D+   F  +L+      ++ E++      +
Sbjct: 109 EVLEIMEQYKISGVPVV-EGESLVGIITNRDL--RFETNLDHTVGSVMTKENLATAKAGI 165

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LED+       +L +  I  L+VVDD  K +G++   D+ + 
Sbjct: 166 TLEDS-----KAILHKRRIEKLLVVDDNGKLVGLITIKDIEKI 203


>gi|297380032|gb|ADI34919.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori v225d]
          Length = 481

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDRGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAR 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
 gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
          Length = 209

 Score = 35.8 bits (81), Expect = 8.9,   Method: Compositional matrix adjust.
 Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 21/145 (14%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N +  D  V     KLG+   C      + D++          DA+  +++   G + V+
Sbjct: 54  NLTVADVLVTKGEEKLGSWLWC-----RTTDTV---------YDAVKNMAQNNIGSLVVL 99

Query: 258 DEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQH 312
            E + + GIITE D  R      +      V ++M    K+I    DT +  AM+L+  +
Sbjct: 100 GERELIAGIITERDYLRKIIAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMTDN 159

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
           +I  + V+D      G+V  +D++R
Sbjct: 160 HIRHVPVIDGT--IAGMVSMVDVVR 182


>gi|169335397|ref|ZP_02862590.1| hypothetical protein ANASTE_01809 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258135|gb|EDS72101.1| hypothetical protein ANASTE_01809 [Anaerofustis stercorihominis DSM
           17244]
          Length = 487

 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-ED 299
           DA  I++  +   V + D+   L GIIT  D+   F +D     ++D M K+  +   E 
Sbjct: 108 DANEIMARYKISGVPITDKTGTLVGIITNRDL--RFERDPKK-KIKDAMTKDNLITAAEG 164

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T L  A ++L+++ I  L +VD   K  G++   D+ +
Sbjct: 165 TTLEEAEKILKKNRIEKLPIVDKNFKLKGLITIKDIEK 202


>gi|331268732|ref|YP_004395224.1| CBS domain-containing protein [Clostridium botulinum BKT015925]
 gi|329125282|gb|AEB75227.1| CBS domain protein, putative [Clostridium botulinum BKT015925]
          Length = 142

 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNPK 294
           A  ++SE   G + V   G+++ GI+T+ DI        +N H+      V+D+M  NP 
Sbjct: 23  AAQMMSEYNVGSIPVC-RGEEVVGIVTDRDITLRSSAQGKNVHQQ----KVKDIMSSNPV 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +      +    +L+ +  I  L VV+D  K +GIV   DL
Sbjct: 78  IANPSMDVNEVARLMGERQIRRLPVVED-DKVVGIVALGDL 117


>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
          Length = 156

 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 29/136 (21%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT--------------- 268
           M   + + +VK    + DA+ +L + R     V+D+   L G+++               
Sbjct: 1   MTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGP 60

Query: 269 -EGDIF-------RNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E DIF       + FH+    LS      + DVM   P V+ E T L  A +LL     
Sbjct: 61  AEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKY 120

Query: 315 SVLMVVDDCQKAIGIV 330
             L VVD   K +GI+
Sbjct: 121 RRLPVVDSSGKLVGII 136


>gi|257052565|ref|YP_003130398.1| CBS domain containing protein [Halorhabdus utahensis DSM 12940]
 gi|256691328|gb|ACV11665.1| CBS domain containing protein [Halorhabdus utahensis DSM 12940]
          Length = 283

 Score = 35.8 bits (81), Expect = 9.0,   Method: Compositional matrix adjust.
 Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 10/100 (10%)

Query: 241 DAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           D +  L E++F  V V+   D G++ +G++T   + +N  +D   + VEDV    P    
Sbjct: 24  DVLEYLQERQFSSVPVIKETDAGEECRGLVTRDALIKNPDEDQLAMLVEDV----PTTTG 79

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E +L +VA  ++      + +V  D Q   GIV   D++R
Sbjct: 80  ETSLASVARTMVETGERRIPVV--DGQLE-GIVTITDVIR 116


>gi|229055005|ref|ZP_04195437.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           AH603]
 gi|229165146|ref|ZP_04292940.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           AH621]
 gi|228618313|gb|EEK75344.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           AH621]
 gi|228721277|gb|EEL72801.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           AH603]
          Length = 600

 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 4/165 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      +         VH A     ++ ++T     I +S SG + 
Sbjct: 292 RIYIIACGTSYHAGLVGKQFIEKFAKVPVEVHVASEFSYNMPLLTERPFFIYISQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L          + IT+   S ++  AD  L L   PE     +A T +   QLA+
Sbjct: 352 DSRAVLVQTNEMGHKALTITNVPGSTLSREADYTLPLYAGPEIA---VASTKAYTAQLAV 408

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
              LA  + +++     DF + H  G +    V   D     D++
Sbjct: 409 LSILAADIAKAKG-EVLDFDLTHELGLVANAMVVLCDQKEEMDAL 452


>gi|138896855|ref|YP_001127308.1| putative regulator [Geobacillus thermodenitrificans NG80-2]
 gi|134268368|gb|ABO68563.1| Putative regulator [Geobacillus thermodenitrificans NG80-2]
          Length = 248

 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 6/92 (6%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            RV+I  +G S  IG   +  L     PS +V+ +        M+   D++I +S SG  
Sbjct: 116 NRVLIVAVGLSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKDMVIFISSSG-- 173

Query: 125 DELKAILYYARRF---SIPLIAITSENKSVVA 153
            E K I+  A +    +I  +AIT+   S +A
Sbjct: 174 -ETKTIVQAAEKLRFKNIETVAITNSADSTLA 204


>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
           [Stenotrophomonas maltophilia R551-3]
          Length = 143

 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +IDAI +++EK  G V V+D G +L GI++E D  R      +     +V ++M      
Sbjct: 24  VIDAIRLMAEKGIGAVLVMD-GPRLVGILSERDYARKIVLRDRSSRDTAVAEIMTAQVVT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     +   +QL+  + I  L VV+  Q  +G++   DL++
Sbjct: 83  VSPGEQVEHCLQLVTDYRIRHLPVVEGAQ-VLGVISIGDLVK 123


>gi|16800679|ref|NP_470947.1| hypothetical protein lin1611 [Listeria innocua Clip11262]
 gi|16414098|emb|CAC96842.1| lin1611 [Listeria innocua Clip11262]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.1,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|315282510|ref|ZP_07870905.1| conserved protein YtoI [Listeria marthii FSL S4-120]
 gi|313613841|gb|EFR87590.1| conserved protein YtoI [Listeria marthii FSL S4-120]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|313608590|gb|EFR84463.1| conserved protein YtoI [Listeria monocytogenes FSL F2-208]
          Length = 360

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 150 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 205

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 206 VIPVVKDDLTLIGIVSRQDILK 227


>gi|308172072|ref|YP_003918777.1| L-glutamine-D-fructose-6-phosphateamidotransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|307604936|emb|CBI41307.1| L-glutamine-D-fructose-6-phosphateamidotransferase [Bacillus
           amyloliquefaciens DSM 7]
 gi|328551885|gb|AEB22377.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           amyloliquefaciens TA208]
 gi|328910142|gb|AEB61738.1| L-glutamine-D-fructose-6-phosphateamidotransferase [Bacillus
           amyloliquefaciens LL3]
          Length = 600

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 49/120 (40%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIVACGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LAI
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAI 411


>gi|217964276|ref|YP_002349954.1| CBS domain protein [Listeria monocytogenes HCC23]
 gi|217333546|gb|ACK39340.1| CBS domain protein [Listeria monocytogenes HCC23]
 gi|307571157|emb|CAR84336.1| CBS domain protein [Listeria monocytogenes L99]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|169824006|ref|YP_001691617.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
 gi|303234329|ref|ZP_07320968.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
 gi|167830811|dbj|BAG07727.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
 gi|302494445|gb|EFL54212.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
          Length = 483

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 50/98 (51%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL- 297
           ++DA+ ++S  R   V +V E   L GI+T  D+   F KD   L + DVM K+  +   
Sbjct: 105 IVDALKLMSHYRISGVPIVKEDMTLVGILTNRDV--RFVKD-EQLPIGDVMTKDNLITGH 161

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E+  +  A++ +    I  L +VD+  K  G++   D+
Sbjct: 162 ENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKDV 199


>gi|154684701|ref|YP_001419862.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           amyloliquefaciens FZB42]
 gi|154350552|gb|ABS72631.1| GlmS [Bacillus amyloliquefaciens FZB42]
          Length = 600

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 49/120 (40%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIVACGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LAI
Sbjct: 352 DSRAVLVQVKALGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAI 411


>gi|154151431|ref|YP_001405049.1| hypothetical protein Mboo_1891 [Candidatus Methanoregula boonei
           6A8]
 gi|153999983|gb|ABS56406.1| protein of unknown function DUF21 [Methanoregula boonei 6A8]
          Length = 425

 Score = 35.8 bits (81), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 50/97 (51%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           +AI + +E  F  + V  D+   + G++   D+F     +   LS++++M  +P  + E 
Sbjct: 220 EAIRLFNETGFSRIPVYHDQIDNITGVLNVKDVFSAMVSNRKDLSIKEIMY-DPTFVPET 278

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   ++ L+ H + + +++D+    +GIV   D+L
Sbjct: 279 KKIDDLLKELQVHRVQIAIIIDEYSGFVGIVTVEDIL 315


>gi|323336322|gb|EGA77591.1| Imd3p [Saccharomyces cerevisiae Vin13]
          Length = 523

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|319783821|ref|YP_004143297.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
 gi|317169709|gb|ADV13247.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Mesorhizobium ciceri biovar biserrulae WSM1271]
          Length = 607

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           ++++D    +S SG + +  A L Y R+  + + AI +  +S +A  +D+VL     PE 
Sbjct: 335 LSKNDAAFFISQSGETADTLASLRYCRKAGMKIGAIVNVRESTMARESDVVLPTLAGPEI 394

Query: 169 CPHGLAPTTSAIMQLAIGDALAI 191
              G+A T +   QL++  ALA+
Sbjct: 395 ---GVASTKAFTCQLSVLAALAV 414


>gi|317014239|gb|ADU81675.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori
           Gambia94/24]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKAIADNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|307595707|ref|YP_003902024.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550908|gb|ADN50973.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 146

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 6/100 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNP--KVI 296
           DAI ++  +    + VVD+G K  GI+T  DI R   K  +LN +SV      N    V 
Sbjct: 24  DAIELMIRENTDYLLVVDDGGKAVGIVTASDILRTIGKVGNLN-VSVGQCCSFNRLVSVR 82

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L D++   AM L+ ++ +  L+VVDD     G++   D++
Sbjct: 83  LSDSIYRAAM-LMSEYGVKHLLVVDDRGNPCGVLTSDDVI 121


>gi|296532694|ref|ZP_06895384.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
 gi|296266977|gb|EFH12912.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 145

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 237 CPLIDAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT-LSVEDVMI 290
            PL DA  I   L++ R G V V D G  + GI++E DI R    H++    L  E +M 
Sbjct: 18  APLDDAAAIARTLAQHRIGAVLVRDAGGAVLGIVSERDIARALAAHEEATARLRAEQLMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    I   T +  A+ L+    +  L V+       G+V   DL++
Sbjct: 78  RVLHTITPATSIADALALMTDRRVRHLPVLARDGSLAGMVSIGDLVK 124


>gi|293553524|ref|ZP_06674152.1| transcriptional regulator [Enterococcus faecium E1039]
 gi|291602401|gb|EFF32625.1| transcriptional regulator [Enterococcus faecium E1039]
          Length = 235

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 14/178 (7%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLAS 88
           IA+K    S++S  + +L  + H  +++I  +     R+ +   G S     K  + +  
Sbjct: 43  IAKKMADLSIQSIKKAQLQIE-HEDLDQIGKVLNKAQRIFLFAKGDSQITARKFQNKMVK 101

Query: 89  TGTPSFFVHAAEASHG--DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                F + A E S    +   +  +D  I +S+SG     + I+ Y +    P + IT 
Sbjct: 102 LN--KFLIMAEEYSDSSWNAANLISEDCAIFISYSGRIHHYERIMTYLKHVEAPTLLITG 159

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRNFSEN 202
              S +   AD+ L + +E     +  A   +   Q+A    L    +++ S+NF EN
Sbjct: 160 NQHSEMDKQADMCLVISQE----EYDFAKVATFSSQIAFDYVLNTLFSVIYSQNFEEN 213


>gi|169831232|ref|YP_001717214.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638076|gb|ACA59582.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 485

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-D 299
           +A T++   R   V V + G KL GIIT  D+   F  D N   +E VM +   +     
Sbjct: 110 EANTLMGRYRISGVPVTENG-KLVGIITNRDL--RFVTDFNQ-PIEQVMTRENLITAPVG 165

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T L  A ++LR++ I  L +VD+     G++   D+
Sbjct: 166 TTLEEAKEILRRYKIEKLPLVDEEYNLRGLITIKDI 201


>gi|182419398|ref|ZP_02950650.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum 5521]
 gi|237666879|ref|ZP_04526864.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182376729|gb|EDT74301.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum 5521]
 gi|237658078|gb|EEP55633.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 484

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 9/100 (9%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDL-NTLSVEDVMIKNPKVIL 297
           DA  ++++ R   V V  +G KL GIIT  DI    +F K + + ++ E+++  + K  +
Sbjct: 108 DAENLMAQYRISGVPVTKDG-KLVGIITNRDIIFETDFQKKISDVMTSENLITSHEKTTV 166

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E+     A ++L++H I  L +VD      G++   D+ +
Sbjct: 167 EE-----AKEILKKHKIEKLPLVDAEGNLKGLITMKDIEK 201


>gi|307331080|ref|ZP_07610209.1| inosine-5'-monophosphate dehydrogenase [Streptomyces violaceusniger
           Tu 4113]
 gi|306883291|gb|EFN14348.1| inosine-5'-monophosphate dehydrogenase [Streptomyces violaceusniger
           Tu 4113]
          Length = 500

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 14/111 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    L +A  + ++ R   V V D   KL GI+T  D+   F  D     V +VM   
Sbjct: 108 VRPDATLHEADALCAKFRISGVPVTDAVGKLLGIVTNRDMA--FEVDRGR-QVREVMTPM 164

Query: 293 PKVIL------EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P V        ED     AMQLLR+H I  L +VDD     G++   D ++
Sbjct: 165 PLVTGKVGISGED-----AMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVK 210


>gi|198283570|ref|YP_002219891.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665500|ref|YP_002426195.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248091|gb|ACH83684.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517713|gb|ACK78299.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 486

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 6/86 (6%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQ 311
           V VVD G++L+GI+T  D+   F   ++   V  VM    +++   E T L V   LL Q
Sbjct: 120 VPVVD-GERLEGIVTHRDL--RFETRMDA-PVSSVMTPRERLVTVPEGTSLDVTKALLHQ 175

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I  ++VV+D  +  G++   D+ +
Sbjct: 176 HRIEKILVVNDRFELRGLITVKDIRK 201


>gi|114800464|ref|YP_760508.1| inosine-5'-monophosphate dehydrogenase [Hyphomonas neptunium ATCC
           15444]
 gi|114740638|gb|ABI78763.1| inosine-5'-monophosphate dehydrogenase [Hyphomonas neptunium ATCC
           15444]
          Length = 485

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 3/85 (3%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           F  + VV++  K+ GI+T  D    F  DLN   V  +M +N      D     A +LL 
Sbjct: 116 FSGIPVVEKSGKVLGIVTNRDT--RFADDLNE-KVATLMTRNVVTAQMDMDPAEARRLLH 172

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDL 335
           +H I  L++VD   + +G++   D+
Sbjct: 173 KHRIERLVIVDHDGRCLGLLTVKDM 197


>gi|55822341|ref|YP_140782.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           CNRZ1066]
 gi|55738326|gb|AAV61967.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           CNRZ1066]
          Length = 139

 Score = 35.8 bits (81), Expect = 9.3,   Method: Compositional matrix adjust.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 13/95 (13%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNTLSVEDVM 289
           A  I+ +K   C+ V+ E  KL G+ITEG +                +  LN   V D+M
Sbjct: 17  AADIIRDKGLRCLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLLNKTKVGDIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           IKN   + +   L  A+ ++ Q+ + VL VVD+ Q
Sbjct: 76  IKNVLTVSKYASLEDAICIMLQNKVGVLPVVDNDQ 110


>gi|296133844|ref|YP_003641091.1| CBS domain containing membrane protein [Thermincola sp. JR]
 gi|296032422|gb|ADG83190.1| CBS domain containing membrane protein [Thermincola potens JR]
          Length = 217

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 13/108 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTLS--------VEDV 288
           +A+ ++ +     + VVD  Q L G+ +E D+     RN H +  T          +  V
Sbjct: 22  EALELIRQHDVRHLPVVDRKQHLVGVTSESDLLKIFPRNKHDERKTFETNLLLRTPITQV 81

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M+ NP  I     +  A  L++ H I  L V++   K IG++   D++
Sbjct: 82  MVPNPYHINPHITIEEAALLMKNHKIGCLPVIEHS-KVIGLISRTDVI 128


>gi|257093572|ref|YP_003167213.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046096|gb|ACV35284.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 479

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 35/105 (33%), Positives = 52/105 (49%), Gaps = 8/105 (7%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFRN----FHKDLNTLSVEDVMIKNP 293
           L+D + I+ EK    V V D   KL  GI+T+ D+ RN       D + ++V  +M    
Sbjct: 28  LVDVVRIMREKNISSVVVCD--NKLPSGIMTDRDL-RNKVVASGVDPSAIAVRAIMNSPL 84

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VI E+ LL  A+  + +  I  L VVD   K  GI+   D++R 
Sbjct: 85  AVIGENDLLYEALYQMSRQKIHRLAVVDGKGKLSGIITDSDIIRL 129


>gi|290894455|ref|ZP_06557414.1| CBS domain-containing protein [Listeria monocytogenes FSL J2-071]
 gi|290555993|gb|EFD89548.1| CBS domain-containing protein [Listeria monocytogenes FSL J2-071]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|254828189|ref|ZP_05232876.1| CBS domain-containing protein [Listeria monocytogenes FSL N3-165]
 gi|258600576|gb|EEW13901.1| CBS domain-containing protein [Listeria monocytogenes FSL N3-165]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|116873005|ref|YP_849786.1| CBS domain-containing protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741883|emb|CAK21007.1| CBS domain protein [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 442

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 232 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 287

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 288 VIPVVKDDLTLIGIVSRQDILK 309


>gi|114777703|ref|ZP_01452663.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
           PV-1]
 gi|114551919|gb|EAU54453.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
           PV-1]
          Length = 491

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 5/93 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK--VILEDTLL 302
           + +E  F    V D   K+ GI+T  DI   F +D     V ++M    +  V+     L
Sbjct: 113 LAAENNFSGFPVQDADGKVCGIVTNRDI--RFERDPGK-KVSEMMTPRDRLVVVAHGVEL 169

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  +L R+H I  L VVDD     G++   D+
Sbjct: 170 DVCKELFREHRIEKLPVVDDAGYLKGMITVRDI 202


>gi|222056125|ref|YP_002538487.1| MgtE intracellular region [Geobacter sp. FRC-32]
 gi|221565414|gb|ACM21386.1| MgtE intracellular region [Geobacter sp. FRC-32]
          Length = 418

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 25/129 (19%), Positives = 65/129 (50%), Gaps = 12/129 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + + F+  S  +   D++ +V++  P ++ +          + VVD+ ++L+G+I+ 
Sbjct: 288 GGLMNSEFLSVSSELMVADAMKVVRLLAPDVETVY--------YIYVVDKEERLQGVISL 339

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            ++     ++     V ++M  N K +  ++     ++++ ++N+  + V+D  +K  G+
Sbjct: 340 KELILAHEEE----PVSELMTTNLKTVGVESTPEEILEIIAKYNLIAVPVLDKEEKMAGL 395

Query: 330 VHFLDLLRF 338
           V   D+L  
Sbjct: 396 VTVDDVLEM 404


>gi|260907537|ref|ZP_05915859.1| inosine 5-monophosphate dehydrogenase [Brevibacterium linens BL2]
          Length = 485

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 13/110 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVIL 297
           ++ A+ +L+++  G   VVDE  KL+G+I   ++     KD++   SV +++   P VI 
Sbjct: 107 VLSALHVLAKRAHGFGVVVDEAGKLEGVIDSANL-----KDVDRFTSVSELLEATPHVIR 161

Query: 298 -------EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                  +D  L    + + +       VVDD  + +G +    LLR  I
Sbjct: 162 STEVDWSDDAQLESLFETMNESRTPFAAVVDDEDRVLGSLTPKSLLRSSI 211


>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 142

 Score = 35.8 bits (81), Expect = 9.4,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 50/99 (50%), Gaps = 5/99 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVIL 297
           +A+ +L+    G + V++ G KL GI++E D  R      K+    +V D+M ++   + 
Sbjct: 26  EALKLLANYGVGALTVMENG-KLAGIVSERDYTRKVALMGKNSKETTVADIMTRDVITVT 84

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +T     M L+ Q  I  L V+D  +  +G++   DL+
Sbjct: 85  PNTGTHACMALMSQKKIRHLPVLDGAE-VVGLISIRDLM 122


>gi|258593580|emb|CBE69921.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [NC10 bacterium 'Dutch sediment']
          Length = 487

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 48/98 (48%), Gaps = 5/98 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA+ ++   R   V V   G KL GI+T  DI   F   L+ L +  VM K+  +   
Sbjct: 107 LSDALELMQHYRISGVPVTQNG-KLVGILTNRDI--RFETKLD-LKIAQVMTKDRLITAP 162

Query: 299 -DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             T L  A ++L ++ I  L+VVDD     G++   D+
Sbjct: 163 VGTSLEEAKEILHRNRIEKLLVVDDAFNLRGLITIKDI 200


>gi|294931343|ref|XP_002779843.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239889529|gb|EER11638.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 648

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 50/172 (29%), Positives = 80/172 (46%), Gaps = 16/172 (9%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSF 94
           L  L + +QG        A+E I A   R++I   G S H   IG  L   LA       
Sbjct: 307 LGGLNTKVQGTEK----TALETI-ANADRIIICACGTSWHSGLIGEYLIEQLARINVEVE 361

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSG-SSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +  A+E  + +  ++T  D+I+ +S SG ++D L+AI   A+  S   I I +   S +A
Sbjct: 362 Y--ASEFRYRN-PLLTPKDVIVAISQSGETADTLEAI-RIAKSNSALSIGIVNCVGSTIA 417

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              D  + L   PE    G+A T +   Q+ +   LA++L   R   E+D++
Sbjct: 418 RDTDAGIYLHAGPEI---GVASTKAFTSQVMVLTLLALSLARKRGTIEDDYF 466


>gi|229009669|ref|ZP_04166893.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           mycoides DSM 2048]
 gi|228751549|gb|EEM01351.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           mycoides DSM 2048]
          Length = 600

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 4/165 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      +         VH A     ++ ++T     I +S SG + 
Sbjct: 292 RIYIIACGTSYHAGLVGKQFIEKFAKVPVEVHVASEFSYNMPLLTERPFFIYISQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L          + IT+   S ++  AD  L L   PE     +A T +   QLA+
Sbjct: 352 DSRAVLVQTNEMGHKALTITNVPGSTLSREADYTLPLYAGPEIA---VASTKAYTAQLAV 408

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
              LA  + +++     DF + H  G +    V   D     D++
Sbjct: 409 LSILAADIAKAKG-EVLDFDLTHELGLVANAMVVLCDQKEEMDAL 452


>gi|261855250|ref|YP_003262533.1| nucleotidyl transferase [Halothiobacillus neapolitanus c2]
 gi|261835719|gb|ACX95486.1| Nucleotidyl transferase [Halothiobacillus neapolitanus c2]
          Length = 353

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/97 (26%), Positives = 47/97 (48%), Gaps = 1/97 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDT 300
           AI ++ +       V+D+  +L G +T+GDI R   + L+    V +VM   P+ +    
Sbjct: 19  AIEVIDQGAKQIALVLDDDGRLIGTVTDGDIRRGILRHLSLEAPVSEVMNAKPRSLAAGY 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               A+QLL    +  + +VD   K +G+    DL++
Sbjct: 79  SRAEALQLLGSAQVLQVPIVDRDGKLVGLETMTDLMK 115


>gi|254490142|ref|ZP_05103333.1| 6-phospho 3-hexuloisomerase [Methylophaga thiooxidans DMS010]
 gi|224464628|gb|EEF80886.1| 6-phospho 3-hexuloisomerase [Methylophaga thiooxydans DMS010]
          Length = 179

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 17/140 (12%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L + +SSL+ E  F   C   K      R+ ITG G+S  +G+ L   L  +G   +   
Sbjct: 16  LGATDSSLESE--FVAMCDDAK------RIFITGAGRSKLVGNFLGMRLMHSGYTVYV-- 65

Query: 98  AAEASHGDLGM--ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                 G++    I   DL+IV+S SG + +L +    A+  +  ++ I S++ S +   
Sbjct: 66  -----QGEISTPSIREGDLLIVISGSGETTQLVSFANKAKSENAKVVLICSKSSSTIGDM 120

Query: 156 ADIVLTLPKEPESCPHGLAP 175
           AD  + +  +    P    P
Sbjct: 121 ADKTIQIGTDDSFAPTKGMP 140


>gi|217032520|ref|ZP_03438011.1| hypothetical protein HPB128_180g19 [Helicobacter pylori B128]
 gi|298736533|ref|YP_003729059.1| IMP dehydrogenase [Helicobacter pylori B8]
 gi|216945798|gb|EEC24421.1| hypothetical protein HPB128_180g19 [Helicobacter pylori B128]
 gi|298355723|emb|CBI66595.1| IMP dehydrogenase [Helicobacter pylori B8]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKAIADNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|18313671|ref|NP_560338.1| hypothetical protein PAE2898 [Pyrobaculum aerophilum str. IM2]
 gi|18161221|gb|AAL64520.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score = 35.8 bits (81), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLK--GIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVI 296
           +A  I++E R G + +V+     K  G+I+E DI R   K   L T   +   + N   +
Sbjct: 22  EAAAIMAENRVGLLVIVERENPKKPIGVISERDIIRTIAKKAPLTTTVDKAGTMHNFVYV 81

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D  + VA + ++Q  +  ++V+D   +  G++   DL+
Sbjct: 82  YADEPIIVAAKKMKQFQVRHIVVLDRNGEVYGVISIRDLI 121


>gi|332312018|gb|EGJ25113.1| CBS domain protein [Listeria monocytogenes str. Scott A]
          Length = 442

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 232 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 287

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 288 VIPVVKDDLTLIGIVSRQDILK 309


>gi|323347336|gb|EGA81609.1| Imd3p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 523

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|317011050|gb|ADU84797.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori
           SouthAfrica7]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|299535816|ref|ZP_07049137.1| YqzB [Lysinibacillus fusiformis ZC1]
 gi|298729016|gb|EFI69570.1| YqzB [Lysinibacillus fusiformis ZC1]
          Length = 210

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 49/95 (51%), Gaps = 6/95 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVIL- 297
           DAI  +  +  G + VVD+ + L G+++  D+ R     +DLN + V  +M + P +   
Sbjct: 98  DAICFMFSEDVGTLFVVDKNEFLTGVLSRKDLLRTSIGTQDLNKIPVHIIMTRMPNISYC 157

Query: 298 --EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              D+L+  A +L+ +  +  L VV+  +  + IV
Sbjct: 158 ERSDSLIVAANKLI-EREVDSLPVVEPQEGGLTIV 191


>gi|269120129|ref|YP_003308306.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Sebaldella termitidis ATCC 33386]
 gi|268614007|gb|ACZ08375.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 383

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 7/95 (7%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKV 295
           PL + I  + + +   + +VD   KL+G+IT     R  + D+++ +V+  +VM K+   
Sbjct: 266 PLCNCIEKMRKSKVDSIFIVDSNDKLEGLIT----IRTLN-DVHSHNVKASEVMNKSLFT 320

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           I ED  +   +QL+  +N+S + VVD  Q+  G++
Sbjct: 321 IYEDYSIINLLQLIIDNNLSAIPVVDRRQRLKGLI 355


>gi|126465513|ref|YP_001040622.1| CBS domain-containing protein [Staphylothermus marinus F1]
 gi|126014336|gb|ABN69714.1| CBS domain containing protein [Staphylothermus marinus F1]
          Length = 623

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 14/112 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           S + +P V       DA+T +  +R   V      +KL      G   R  +  +  L  
Sbjct: 500 SANRLPFVAFE----DAVTGIKSRRLIWV------RKL----VRGAARRGRYVKITPLVA 545

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM+   K +  +TLLT A+ L+++ N++ + V+ D ++ + IV   D+LR
Sbjct: 546 LDVMVPYRKYVSPNTLLTRAIDLMKEANLNGIPVLSDDRQVVSIVSKNDILR 597


>gi|46907807|ref|YP_014196.1| CBS domain-containing protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|226224177|ref|YP_002758284.1| hypothetical protein Lm4b_01587 [Listeria monocytogenes Clip81459]
 gi|254824365|ref|ZP_05229366.1| CBS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|254852199|ref|ZP_05241547.1| CBS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|254931516|ref|ZP_05264875.1| CBS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|255521291|ref|ZP_05388528.1| hypothetical protein LmonocFSL_08715 [Listeria monocytogenes FSL
           J1-175]
 gi|300765998|ref|ZP_07075969.1| hypothetical protein LMHG_11684 [Listeria monocytogenes FSL N1-017]
 gi|46881076|gb|AAT04373.1| CBS domain protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|225876639|emb|CAS05348.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605505|gb|EEW18113.1| CBS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|293583069|gb|EFF95101.1| CBS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|293593599|gb|EFG01360.1| CBS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|300513316|gb|EFK40392.1| hypothetical protein LMHG_11684 [Listeria monocytogenes FSL N1-017]
 gi|328465074|gb|EGF36348.1| hypothetical protein LM1816_12707 [Listeria monocytogenes 1816]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|15645448|ref|NP_207622.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori 26695]
 gi|2497358|sp|P56088|IMDH_HELPY RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|2313963|gb|AAD07879.1| inosine-5'-monophosphate dehydrogenase (guaB) [Helicobacter pylori
           26695]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|332972935|gb|EGK10877.1| CBS domain protein [Desmospora sp. 8437]
          Length = 202

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 9/96 (9%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKD-LNTLSVEDVMIKNPK 294
           A+ +L+ + +  V V+D+  K++G+I++ DI        +F  D L  L V D M +N  
Sbjct: 78  ALLVLTRRGYASVPVIDDDGKVEGVISKTDILDLMLNRSHFRLDRLANLYVRDAMNQNHS 137

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            IL +++ + A  +L       + V+D   + IGI+
Sbjct: 138 GILPNSIFSFAFDVLLDR--PYIPVIDLDNRFIGIL 171


>gi|299535418|ref|ZP_07048740.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
 gi|298729179|gb|EFI69732.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
          Length = 215

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 19/109 (17%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--------TLSVEDVMIKN 292
           +A+ ++ EK+   + VVD+ Q + G+ITE DI       L            VED+M+K+
Sbjct: 22  EALKLMREKKVRHLPVVDDEQHVLGVITERDIKEVLPSSLQDEPNSPIFNAKVEDIMVKD 81

Query: 293 PKV-----ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P +      +E+  LT       +  I  L +V    K +GIV   DLL
Sbjct: 82  PLIGHPLDFVEEVALT-----FYESKIGCLPIVSGG-KLVGIVTTTDLL 124


>gi|295839565|ref|ZP_06826498.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
 gi|197696853|gb|EDY43786.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
          Length = 305

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 63/138 (45%), Gaps = 4/138 (2%)

Query: 60  IKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           + A+ G  RV I G+G SG +G  L   L   G  +F      A+     ++   D+ I 
Sbjct: 147 VDAVAGARRVDIFGLGASGFVGGDLHQKLHRIGHMAFVWTDGHAALTASALLGARDVAIG 206

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S +GS+ +    L  A       IA+T+  +S +A  AD+VLT        P     T 
Sbjct: 207 ISHTGSTVDTLEPLQAAGERGATTIALTNFARSPLAECADLVLT--TAVREMPLRSGATA 264

Query: 178 SAIMQLAIGDALAIALLE 195
           S I QLA+ D L + + +
Sbjct: 265 SRIAQLAVVDCLFVGVAQ 282


>gi|150399099|ref|YP_001322866.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150011802|gb|ABR54254.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 411

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 2/84 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           ++DE   + GIIT+ DI R   K   L  + V  +M K+P  I  D  +  A  L+ ++N
Sbjct: 96  IIDEKNNMVGIITDYDIMRCAAKSKLLRDVLVNKIMSKSPITIDSDESIGKARSLMMKYN 155

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L+V++      G+V   D+++
Sbjct: 156 IGRLVVLNKNGNPTGMVTEDDIVK 179


>gi|313618729|gb|EFR90646.1| conserved protein YtoI [Listeria innocua FSL S4-378]
          Length = 442

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 232 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 287

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 288 VIPVVKDDLTLIGIVSRQDILK 309


>gi|307637521|gb|ADN79971.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 908]
 gi|325996110|gb|ADZ51515.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 2018]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|295099266|emb|CBK88355.1| Predicted transcriptional regulator, contains C-terminal CBS
           domains [Eubacterium cylindroides T2-87]
          Length = 215

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 51/108 (47%), Gaps = 13/108 (12%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------------VEDV 288
           + I ++++ +   V V + G KL G+ITEG I  +      +LS            VE V
Sbjct: 23  EIIDLMNQNKIHRVPVTENG-KLVGLITEGMISNSGTSQATSLSIYELNYLLSKTTVETV 81

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           MIKN   + +D L+  A   + + +I  L VVD     +GI+   D+ 
Sbjct: 82  MIKNVVSVDQDELMEYATSKMLKSDIGCLPVVDQTGDVVGILTQTDVF 129


>gi|297526241|ref|YP_003668265.1| CBS domain containing membrane protein [Staphylothermus hellenicus
           DSM 12710]
 gi|297255157|gb|ADI31366.1| CBS domain containing membrane protein [Staphylothermus hellenicus
           DSM 12710]
          Length = 408

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 10/97 (10%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+T +  +R   V      +KL      G   R  +  +  L   DVM+   K I  +T
Sbjct: 296 DAVTGIKSRRLIWV------RKL----VRGAARRGRYVKITPLVALDVMVPYKKYISPNT 345

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LLT A+ L+++ N++ + V+ D ++ + I+   D+LR
Sbjct: 346 LLTRAIDLMKEANLNGIPVLSDDRQVVSIISKNDILR 382


>gi|260887942|ref|ZP_05899205.1| inosine-5'-monophosphate dehydrogenase [Selenomonas sputigena ATCC
           35185]
 gi|330838572|ref|YP_004413152.1| IMP dehydrogenase [Selenomonas sputigena ATCC 35185]
 gi|260862342|gb|EEX76842.1| inosine-5'-monophosphate dehydrogenase [Selenomonas sputigena ATCC
           35185]
 gi|329746336|gb|AEB99692.1| IMP dehydrogenase [Selenomonas sputigena ATCC 35185]
          Length = 500

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 69/158 (43%), Gaps = 12/158 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG--DSIPL 232
           P TSAIMQ    D +AIAL      S   F       +     +       SG   S   
Sbjct: 53  PMTSAIMQAVSNDTMAIALAREGGVS---FIYGSQTPEQEAAMISRVKNYKSGFVSSDSN 109

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +K    L + + +        +AV ++G    KL GI+T  D +R      +T  V+D M
Sbjct: 110 IKPTTTLGEVLALKDATGHSTMAVTEDGTPNGKLVGIVTSRD-YRVTRMSFDT-PVKDFM 167

Query: 290 IKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQK 325
               ++I  D  LT+  A  L+ +H +++L ++D+ Q+
Sbjct: 168 TPFERLIYADANLTLPQANDLIWEHKLNMLPLIDENQR 205


>gi|260428383|ref|ZP_05782362.1| CBS domain protein [Citreicella sp. SE45]
 gi|260422875|gb|EEX16126.1| CBS domain protein [Citreicella sp. SE45]
          Length = 173

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 4/100 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL--SVEDVMIKNPKVILE 298
           A+ +L +KR G + V D    L GI++E DI R        TL  +V ++M  +P+    
Sbjct: 57  AVEVLRDKRIGAILVTDAAGHLVGILSERDIVRRLADTPGRTLPQTVAELMTTDPQTCTL 116

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  L   ++ +       L V++D + A G++   D++ +
Sbjct: 117 DETLVRVLRRMTDGRFRHLPVLEDGEIA-GMISIGDVVNY 155


>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
 gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
          Length = 624

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 7/103 (6%)

Query: 241 DAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPK 294
           +A  I++E+    + V++        L GIIT+ D+ R    +       V +VM  NP+
Sbjct: 172 EAAQIMTERNVSSLLVMESAGANQSPLVGIITDRDLRRRVLAEAKPAESLVSEVMTGNPE 231

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  D L+  AM L+ +     L  V D  + +G++   DLLR
Sbjct: 232 TISPDLLVFEAMLLMAERGYHHL-PVHDGTRVVGMIVIGDLLR 273


>gi|153953102|ref|YP_001393867.1| inosine 5'-monophosphate dehydrogenase [Clostridium kluyveri DSM
           555]
 gi|219853753|ref|YP_002470875.1| hypothetical protein CKR_0410 [Clostridium kluyveri NBRC 12016]
 gi|146345983|gb|EDK32519.1| GuaB [Clostridium kluyveri DSM 555]
 gi|219567477|dbj|BAH05461.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 484

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+ ++S+ R   + +     KL GIIT  DI   F  D +    E +  KN     E+T
Sbjct: 108 DALALMSKYRISGIPIT-VNYKLVGIITNRDII--FETDYDRKISEVMTCKNLITAPENT 164

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  A ++L+ H I  L +VD      G++   D+ +
Sbjct: 165 TIEEAKEILKTHKIEKLPLVDGNNNLRGLITIKDIEK 201


>gi|16803616|ref|NP_465101.1| hypothetical protein lmo1576 [Listeria monocytogenes EGD-e]
 gi|224501484|ref|ZP_03669791.1| hypothetical protein LmonFR_03037 [Listeria monocytogenes FSL
           R2-561]
 gi|16411005|emb|CAC99654.1| lmo1576 [Listeria monocytogenes EGD-e]
          Length = 437

 Score = 35.8 bits (81), Expect = 9.7,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


>gi|328469525|gb|EGF40471.1| hypothetical protein VP10329_11591 [Vibrio parahaemolyticus 10329]
          Length = 283

 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 49  LSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           LS++  H AV+ +   + RV + GIG S      L+  L   G  +    + + SH  + 
Sbjct: 117 LSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITAL---SEQDSHVQIA 172

Query: 108 M---ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLP 163
           +   ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI   T+ 
Sbjct: 173 VARTLSSEDVQIAISYSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADITFDTIA 232

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            E E     +A  T+   Q  I D L I L++ R+ S
Sbjct: 233 NETEHRSSSIASRTA---QNVITDLLFIILVQQRDES 266


>gi|308184616|ref|YP_003928749.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori SJM180]
 gi|308060536|gb|ADO02432.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori SJM180]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|226509844|ref|NP_001148544.1| LOC100282160 [Zea mays]
 gi|195620250|gb|ACG31955.1| CBS domain containing protein [Zea mays]
 gi|223944943|gb|ACN26555.1| unknown [Zea mays]
 gi|268083268|gb|ACY95272.1| unknown [Zea mays]
          Length = 222

 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 2/82 (2%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD G +  G+I + D  R  H     +S  +VM      +  D  +  A  L+ +  I 
Sbjct: 135 VVDSGLRCVGVIVKNDRARASHGSKTKIS--EVMTSPAITLSSDKTVMDAAVLMLKKKIH 192

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L VV+  +K IGIV   D+LR
Sbjct: 193 RLPVVNQDEKVIGIVTRADVLR 214


>gi|28901596|ref|NP_801251.1| hypothetical protein VPA1741 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838195|ref|ZP_01990862.1| putative HTH-type transcriptional regulator YfhH [Vibrio
           parahaemolyticus AQ3810]
 gi|260363148|ref|ZP_05776017.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus K5030]
 gi|260880433|ref|ZP_05892788.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260894801|ref|ZP_05903297.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260900150|ref|ZP_05908545.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28810143|dbj|BAC63084.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748395|gb|EDM59254.1| putative HTH-type transcriptional regulator YfhH [Vibrio
           parahaemolyticus AQ3810]
 gi|308089415|gb|EFO39110.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308091835|gb|EFO41530.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308110098|gb|EFO47638.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308112083|gb|EFO49623.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus K5030]
          Length = 283

 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 74/157 (47%), Gaps = 12/157 (7%)

Query: 49  LSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
           LS++  H AV+ +   + RV + GIG S      L+  L   G  +    + + SH  + 
Sbjct: 117 LSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITAL---SEQDSHVQIA 172

Query: 108 M---ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL-TLP 163
           +   ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI   T+ 
Sbjct: 173 VARTLSSEDVQIAISYSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADITFDTIA 232

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            E E     +A  T+   Q  I D L I L++ R+ S
Sbjct: 233 NETEHRSSSIASRTA---QNVITDLLFIILVQQRDES 266


>gi|15611835|ref|NP_223486.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori J99]
 gi|12230202|sp|Q9ZL14|IMDH_HELPJ RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|4155333|gb|AAD06347.1| INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE [Helicobacter pylori J99]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.8,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|284801967|ref|YP_003413832.1| hypothetical protein LM5578_1722 [Listeria monocytogenes 08-5578]
 gi|284995109|ref|YP_003416877.1| hypothetical protein LM5923_1674 [Listeria monocytogenes 08-5923]
 gi|284057529|gb|ADB68470.1| hypothetical protein LM5578_1722 [Listeria monocytogenes 08-5578]
 gi|284060576|gb|ADB71515.1| hypothetical protein LM5923_1674 [Listeria monocytogenes 08-5923]
          Length = 442

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 232 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 287

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 288 VIPVVKDDLTLIGIVSRQDILK 309


>gi|253681591|ref|ZP_04862388.1| CBS domain protein [Clostridium botulinum D str. 1873]
 gi|253561303|gb|EES90755.1| CBS domain protein [Clostridium botulinum D str. 1873]
          Length = 142

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 13/101 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTLSVEDVMIKNPK 294
           A  ++SE   G + V   G+++ GI+T+ DI        +N H+      V+D+M  NP 
Sbjct: 23  AAQMMSEYNVGSIPVC-RGEEVVGIVTDRDITLRSSAQGKNVHQQ----KVKDIMSSNPV 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V      +    +L+ +  I  L VV++  K +GIV   DL
Sbjct: 78  VTSPSMDVNEVARLMGERQIRRLPVVEN-NKVVGIVALGDL 117


>gi|210135029|ref|YP_002301468.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori P12]
 gi|210132997|gb|ACJ07988.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori P12]
          Length = 481

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|6323464|ref|NP_013536.1| Imd3p [Saccharomyces cerevisiae S288c]
 gi|1708477|sp|P50095|IMDH3_YEAST RecName: Full=Probable inosine-5'-monophosphate dehydrogenase IMD3;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|665971|gb|AAB67516.1| Ylr432wp: Inosine-5'-monophosphate dehydrogenase [Saccharomyces
           cerevisiae]
 gi|151940948|gb|EDN59330.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
 gi|190405468|gb|EDV08735.1| inosine-5'-monophosphate dehydrogenase IMD2 [Saccharomyces
           cerevisiae RM11-1a]
 gi|285813837|tpg|DAA09733.1| TPA: Imd3p [Saccharomyces cerevisiae S288c]
          Length = 523

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|116619880|ref|YP_822036.1| signal-transduction protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223042|gb|ABJ81751.1| putative signal-transduction protein with CBS domains [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 147

 Score = 35.8 bits (81), Expect = 9.9,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 40/82 (48%), Gaps = 3/82 (3%)

Query: 261 QKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +KL GIIT+ D+        +D N ++  DVM  NP     D  L +A+  ++   +  +
Sbjct: 44  RKLVGIITDRDLAIKVVADSRDPNKVTTGDVMTWNPMTCHPDDDLDIAVHSMQSEQVRRI 103

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            +V+D    +GI+   D+   G
Sbjct: 104 PIVNDAGVLVGIISQADIALRG 125


>gi|325997706|gb|ADZ49914.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 2017]
          Length = 481

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|323353744|gb|EGA85600.1| Imd3p [Saccharomyces cerevisiae VL3]
          Length = 523

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|323303746|gb|EGA57532.1| Imd3p [Saccharomyces cerevisiae FostersB]
          Length = 523

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|311070832|ref|YP_003975755.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           atrophaeus 1942]
 gi|310871349|gb|ADP34824.1| glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           atrophaeus 1942]
          Length = 600

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 49/120 (40%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I   G S H G      +         VH A     ++ ++++  L I LS SG + 
Sbjct: 292 RIYIVACGTSYHAGLVGKQYIEMWANVPVEVHVASEFSYNMPLLSKKPLFIFLSQSGETA 351

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           + +A+L   +      + IT+   S ++  AD  L L   PE         T+ I  LAI
Sbjct: 352 DSRAVLVQVKAMGHKALTITNVPGSTLSREADYTLLLHAGPEIAVASTKAYTAQIAVLAI 411


>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
 gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
          Length = 154

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           S +++  V     + DAI  ++E+R G V VV +G+ + G+++E D  R      +   T
Sbjct: 20  SNNAVVTVSPDSSVFDAIKTMAERRIGAVVVV-QGETVLGMLSERDYARKVVLQDRSSRT 78

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V D+M  +   +         M ++ + +   L V+++ +K IG++   DL++
Sbjct: 79  TKVRDIMTDSVYYVGPGDTREHCMAMMTERHFRHLPVIEN-EKLIGLLSIGDLVK 132


>gi|261839352|gb|ACX99117.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori 52]
          Length = 481

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|256271116|gb|EEU06211.1| Imd3p [Saccharomyces cerevisiae JAY291]
 gi|259148409|emb|CAY81656.1| Imd3p [Saccharomyces cerevisiae EC1118]
          Length = 523

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 8/95 (8%)

Query: 248 EKRFG--CVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++RFG     V ++G+   KL GI+T  DI   F +D N+L V+DVM KNP    +   L
Sbjct: 141 KERFGFSGFPVTEDGKRNGKLMGIVTSRDI--QFVED-NSLLVQDVMTKNPVTGAQGITL 197

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++L++     L++VDD    + ++   DL++
Sbjct: 198 SEGNEILKKIKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|295399634|ref|ZP_06809615.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111843|ref|YP_003990159.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294978037|gb|EFG53634.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216944|gb|ADP75548.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 152

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/83 (30%), Positives = 46/83 (55%), Gaps = 8/83 (9%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------RNFHKDL 280
           D +  V++G  L  A+ +L++  +  + V+D   KL G+I+   I        R   + L
Sbjct: 22  DKVAHVQLGNYLDHALLVLTKTGYSAIPVLDTSYKLHGLISMTMIMDAILGLERIEFERL 81

Query: 281 NTLSVEDVMIKN-PKVILEDTLL 302
            T+ VE+VM K+ P+++L+D +L
Sbjct: 82  ETMKVEEVMNKDIPRLLLDDDVL 104


>gi|254779198|ref|YP_003057303.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori B38]
 gi|254001109|emb|CAX29064.1| IMP dehydrogenase (IMPDH) (IMPD) [Helicobacter pylori B38]
          Length = 481

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DVM K P V   
Sbjct: 105 LADAKVITDNYKISGVPVVDDKGLLIGILTNRDV--RFETDLSK-KVGDVMTKMPLVTAH 161

Query: 299 DTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 162 VGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201


>gi|229074219|ref|ZP_04207264.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock4-18]
 gi|229094880|ref|ZP_04225884.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock3-29]
 gi|229106765|ref|ZP_04236991.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock3-28]
 gi|229113834|ref|ZP_04243268.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock1-3]
 gi|228669568|gb|EEL24976.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock1-3]
 gi|228676685|gb|EEL31305.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock3-28]
 gi|228688486|gb|EEL42360.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock3-29]
 gi|228708852|gb|EEL60980.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus cereus
           Rock4-18]
          Length = 600

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 57/135 (42%), Gaps = 9/135 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S H   +G +     A T      VH A     ++ ++T     I +S SG
Sbjct: 292 RIYIIACGTSYHAGLVGKQFIEKFAKTPVE---VHVASEFSYNMPLLTERPFFIYISQSG 348

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + + +A+L          + IT+   S ++  AD  L L   PE     +A T +   Q
Sbjct: 349 ETADSRAVLVQTNEMGHKALTITNVPGSTLSREADYTLPLYAGPEIA---VASTKAYTAQ 405

Query: 183 LAIGDALAIALLESR 197
           LA+   LA  + +++
Sbjct: 406 LAVLSILAADIAKAK 420


>gi|148223982|ref|NP_001083495.1| protein kinase, AMP-activated, gamma 1 non-catalytic subunit
           [Xenopus laevis]
 gi|38051932|gb|AAH60444.1| MGC68503 protein [Xenopus laevis]
          Length = 558

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 57/123 (46%), Gaps = 19/123 (15%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSV-- 285
           +I  ++   P+I A+ I  E+R   + VVDE  K+  I ++ D+      K  N L +  
Sbjct: 424 NIAFIQPHTPIIKALNIFVERRVSALPVVDESGKVVDIYSKFDVINLAAEKTYNNLDITV 483

Query: 286 -----------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                      E V+    K    +TL T+  ++++   +  L+VVD+    +GI+   D
Sbjct: 484 TQALEHRSQYFEGVV----KCSKPETLETIVDRIVKAE-VHRLVVVDEADSIVGIISLSD 538

Query: 335 LLR 337
           +L+
Sbjct: 539 ILQ 541


>gi|47096789|ref|ZP_00234371.1| CBS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|254831977|ref|ZP_05236632.1| hypothetical protein Lmon1_11510 [Listeria monocytogenes 10403S]
 gi|254898257|ref|ZP_05258181.1| hypothetical protein LmonJ_00540 [Listeria monocytogenes J0161]
 gi|254912250|ref|ZP_05262262.1| CBS domain-containing protein domain-containing protein [Listeria
           monocytogenes J2818]
 gi|254936577|ref|ZP_05268274.1| CBS domain-containing protein [Listeria monocytogenes F6900]
 gi|47014822|gb|EAL05773.1| CBS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|258609173|gb|EEW21781.1| CBS domain-containing protein [Listeria monocytogenes F6900]
 gi|293590227|gb|EFF98561.1| CBS domain-containing protein domain-containing protein [Listeria
           monocytogenes J2818]
          Length = 437

 Score = 35.8 bits (81), Expect = 10.0,   Method: Compositional matrix adjust.
 Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 4/82 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L G++T  DI         ++S+E VM KNP  +     +     ++   +I 
Sbjct: 227 VVNRAMRLTGMVTSKDILEKNP----SISIERVMTKNPLTVGPKMSVASVAHMMIWESIE 282

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
           V+ VV D    IGIV   D+L+
Sbjct: 283 VIPVVKDDLTLIGIVSRQDILK 304


Searching..................................................done


Results from round 2




>gi|255764505|ref|YP_003065248.2| polysialic acid capsule expression protein [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254547856|gb|ACT57308.2| polysialic acid capsule expression protein [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 341

 Score =  432 bits (1112), Expect = e-119,   Method: Composition-based stats.
 Identities = 341/341 (100%), Positives = 341/341 (100%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI
Sbjct: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW
Sbjct: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI
Sbjct: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI
Sbjct: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT
Sbjct: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII
Sbjct: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341


>gi|58425506|gb|AAW74543.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae KACC10331]
          Length = 523

 Score =  381 bits (979), Expect = e-104,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH    T    SL     V    R +  E+  L+++ + +  E    F  A   + A
Sbjct: 191 MAVSHLPPATVSDASL-----VASGQRVLEIEREALANVGARIGSE----FAAACRLVLA 241

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 242 SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 301

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 302 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 361

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 362 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 421

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 422 ALMEMSRKRLGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 481

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 482 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 523


>gi|120555621|ref|YP_959972.1| KpsF/GutQ family protein [Marinobacter aquaeolei VT8]
 gi|120325470|gb|ABM19785.1| KpsF/GutQ family protein [Marinobacter aquaeolei VT8]
          Length = 329

 Score =  376 bits (965), Expect = e-102,   Method: Composition-based stats.
 Identities = 148/333 (44%), Positives = 202/333 (60%), Gaps = 7/333 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
             + ++         ALR+I  E+  + +LES + G+    F  A E I A KGRVV+TG
Sbjct: 1   MTESNTFNTQDFCNSALRAIRIEREAIEALESRINGD----FSRACEVIMACKGRVVVTG 56

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG+K+A+TLASTGTP+FFVH  EASHGDLGMIT  D++I +S SGS+ E+  IL
Sbjct: 57  MGKSGHIGNKIAATLASTGTPAFFVHPGEASHGDLGMITPQDVVIAISNSGSTSEVVTIL 116

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R   PLI++T +  SV+A  A   L +    E+CP GLAPT+S    L +GDALA+
Sbjct: 117 PLIKRMGAPLISMTGKPDSVLAQEAVANLDVSVAIEACPLGLAPTSSTTATLVMGDALAV 176

Query: 192 ALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALLE+R FS  DF   HPGG LG    +  SD+MH+GD IP V  G  L  A+  ++ K 
Sbjct: 177 ALLEARGFSAEDFAFSHPGGSLGRRLLLRVSDIMHTGDQIPQVAEGTTLSGALLEITRKG 236

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   VV+    L GI T+GD+ R   K  D++T  ++DVM +N K I  D L   A+ +
Sbjct: 237 LGMTTVVNAAGTLTGIFTDGDLRRTLDKSVDVHTTPIQDVMTRNGKTIRADHLAAEALNI 296

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + +  I+ L V D     +G ++  DLLR G+I
Sbjct: 297 MEEMKINALPVTDANGTLVGAINMHDLLRAGVI 329


>gi|289548135|ref|YP_003473123.1| KpsF/GutQ family protein [Thermocrinis albus DSM 14484]
 gi|289181752|gb|ADC88996.1| KpsF/GutQ family protein [Thermocrinis albus DSM 14484]
          Length = 321

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 201/325 (61%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK   +Q A R    E   +  L  SL       F  AVE + + +G+V+ TG+GKSGHI
Sbjct: 1   MKEDILQKARRVFEIEISQIKRLMDSL----DDSFVRAVEILLSCEGKVITTGVGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+ASTL+STGTP+ F+H +EA HGDLG+I + D+++ +S SG S E+  +L Y +   
Sbjct: 57  ARKIASTLSSTGTPAHFLHPSEALHGDLGVIDKKDVLLAISNSGESKEVLDLLPYVKLLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIAIT+   S +A HAD+ + L  E E+CP  LAPT+S+   L +GDALA+ LLE R 
Sbjct: 117 VPLIAITNRRDSTLAKHADVHIFLNVEKEACPLHLAPTSSSTASLVLGDALAMVLLELRG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E DF + HP G LG       D+ H+G+ +P+V+   P+   +  ++ K FG  AVV+
Sbjct: 177 FTEKDFALRHPAGSLGRKLKLVRDLYHTGEELPVVEEDTPMPQVVLEITSKGFGATAVVN 236

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  KL GIIT+GD+ R  ++  DL+  + +D M +NPKV   D L   A+  +  + I+V
Sbjct: 237 KEGKLVGIITDGDLRRFINRGGDLSRSTAKDAMTRNPKVAYPDELAAQALSRMESYKITV 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + IGI+H  D+LR GI+
Sbjct: 297 LIVVDQENRPIGIIHMHDILRAGIV 321


>gi|222087080|ref|YP_002545615.1| polysialic acid capsule expression protein [Agrobacterium
           radiobacter K84]
 gi|221724528|gb|ACM27684.1| polysialic acid capsule expression protein [Agrobacterium
           radiobacter K84]
          Length = 331

 Score =  374 bits (960), Expect = e-101,   Method: Composition-based stats.
 Identities = 182/330 (55%), Positives = 238/330 (72%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++    ++N  ++ A+R+I  E++GL +LE +L   L+  F  AVE I  I GRV+IT
Sbjct: 1   MNKRAVKFIENGAIESAMRTIEIERQGLEALERALADGLAEPFSRAVEVIGGIDGRVIIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA++ ASTGTPSFFVH  EA+HGDLGMIT+DD+II +SW G S EL+ I
Sbjct: 61  GVGKSGHIGNKLAASFASTGTPSFFVHPVEANHGDLGMITQDDVIIAISWGGESAELRGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y+RRFSIP+IAIT+   S +A  +D+VL LPKE E+CPHGLAPTTS ++QLAIGDAL 
Sbjct: 121 ISYSRRFSIPMIAITAGETSTLARESDVVLLLPKEQEACPHGLAPTTSTLLQLAIGDALV 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF   HPGGKLG       D+MH GD +PLV +G  + +A   LS  R
Sbjct: 181 VALLEARGFTAEDFRTFHPGGKLGASLSHVVDIMHKGDRVPLVNLGTGMQEAAMTLSNMR 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D+   L GIIT+GDI RN    L  + V++VM +NPK + E TL T AM LL 
Sbjct: 241 FGCVGVIDDDGCLCGIITDGDIARNLGGSLAEMRVDEVMTRNPKTVKETTLATGAMALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++NIS LMVVD+ ++ IGIVHF DLLR G+
Sbjct: 301 RYNISALMVVDETKRPIGIVHFHDLLRIGV 330


>gi|226943412|ref|YP_002798485.1| Arabinose 5-phosphate isomerase protein [Azotobacter vinelandii DJ]
 gi|226718339|gb|ACO77510.1| Arabinose 5-phosphate isomerase protein [Azotobacter vinelandii DJ]
          Length = 344

 Score =  373 bits (958), Expect = e-101,   Method: Composition-based stats.
 Identities = 131/325 (40%), Positives = 198/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++ +Q A R+I  E   + +L + +       F  A + I   KGR+V+ G+GKSGHIG
Sbjct: 24  SSNPIQSAQRTIRLEIEAIEALLARIDDT----FTTACKLILECKGRIVVVGMGKSGHIG 79

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+FFVH  EASHGD+GMITRDDL++ LS SGS+ E+  +L   +R  I
Sbjct: 80  RKIAATLASTGTPAFFVHPGEASHGDMGMITRDDLVLALSNSGSTVEILTLLPLIQRLGI 139

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A + L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 140 TLISMTGNPDSPLAGAATVNLDAGVSQEACPLNLAPTSSTTTALVLGDALAIALLEARGF 199

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   ++MH+GDS+P V+ G  L +A+  ++ K  G   V++
Sbjct: 200 TAEDFAFSHPGGALGRRLLLKVENIMHAGDSLPCVQRGTTLREALLEMTHKGLGMTVVLE 259

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L GI T+GD+ R   +  D+   ++++VM  + K      L   A++++  H I+ 
Sbjct: 260 TDGRLAGIFTDGDLRRALDRNIDVRQATIDEVMTPHGKTARAGMLAAQALKIMEDHKINA 319

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD+  + +G ++  DLL+ G++
Sbjct: 320 LVVVDEEDRPVGALNMHDLLQAGVL 344


>gi|288818913|ref|YP_003433261.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
 gi|288788313|dbj|BAI70060.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
 gi|308752500|gb|ADO45983.1| KpsF/GutQ family protein [Hydrogenobacter thermophilus TK-6]
          Length = 321

 Score =  372 bits (955), Expect = e-101,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 203/325 (62%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK   ++ A R    E   L  L   +   L      AVE I + +G+V+ TG+GKSGHI
Sbjct: 1   MKEEILKKARRVFDIEIGELLRLRDCIDDNL----ARAVEIILSCEGKVITTGVGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+ASTL+STGTP+ F+H +EA HGDLG+I   D+++ +S SG S E+ +++ Y +   
Sbjct: 57  AQKIASTLSSTGTPAHFLHPSEALHGDLGVIDHKDVLLAVSNSGESPEVVSLIPYVKLLK 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+IAIT+   S +A +AD+ L L  + E+CP  LAPT+S+   L +GDA+A+ LLE R 
Sbjct: 117 VPIIAITNREDSTLARYADVHLFLNVKKEACPLELAPTSSSTASLVLGDAIAMVLLELRG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F++ DF + HP G LG       ++ H+G+ +P+V    P+ D I  ++ K FG  AV+D
Sbjct: 177 FTKEDFALRHPAGSLGRKLRVVRELYHTGEEVPIVYEDTPMPDVIIEMTSKGFGATAVID 236

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +G KL GIIT+GD+ R   +  + NT + +DVM KNPK +  D L   A++ + +H I+V
Sbjct: 237 KGGKLVGIITDGDLRRFVRRGGNFNTSTAKDVMTKNPKTVKSDELAAEALKKMEEHKITV 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+DD  +  GI+H  D+LR G++
Sbjct: 297 LIVIDDEGRPEGIIHMHDILRAGVL 321


>gi|146305910|ref|YP_001186375.1| KpsF/GutQ family protein [Pseudomonas mendocina ymp]
 gi|145574111|gb|ABP83643.1| KpsF/GutQ family protein [Pseudomonas mendocina ymp]
          Length = 324

 Score =  370 bits (951), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/323 (42%), Positives = 197/323 (60%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E   +  L   +       F  A E I A KGRVV+ G+GKSGHIG+K
Sbjct: 6   DLIDSAQRTIRLELEAVQELLPRI----DANFIKACELILACKGRVVVVGMGKSGHIGNK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT SFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 62  IAATLASTGTTSFFVHPAEASHGDMGMITKDDIVLALSNSGSTAEIVTLLPLIKRLGIRL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGNPDSPLAKAAEVNLDARVSQEACPLNLAPTSSTTASLVLGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   +VMH+GD++P V  G  L DA+  +++K  G   V++  
Sbjct: 182 EDFAFSHPGGALGRRLLLKVENVMHAGDALPRVNRGTSLRDALLEMTQKGLGMTVVLEAD 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI T+GD+ R   K  D+   S+++VM  + K    + L   A++++  H I+ L+
Sbjct: 242 GRLAGIFTDGDLRRTLDKGIDVRQASIDEVMTPHGKTARAEMLAAEALKIMEDHKINALV 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVDD  + +G ++  DLLR G++
Sbjct: 302 VVDDQDRPVGALNMHDLLRAGVM 324


>gi|15606685|ref|NP_214065.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
 gi|7388505|sp|O67500|Y1546_AQUAE RecName: Full=Uncharacterized phosphosugar isomerase aq_1546
 gi|2983910|gb|AAC07460.1| polysialic acid capsule expression protein [Aquifex aeolicus VF5]
          Length = 322

 Score =  370 bits (950), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/323 (42%), Positives = 204/323 (63%), Gaps = 6/323 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   ++ A   I  E +GL  L SSL       F  AVE ++  +G+V++TGIGKSGH
Sbjct: 1   MEEKDLLEFAREVIREEIKGLERLLSSL----DENFSKAVEILRNCEGKVILTGIGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K++STL+STGTPS F+H AEA HGD+G++   D +I +S SG S E+  +L YA+  
Sbjct: 57  IARKISSTLSSTGTPSVFLHPAEALHGDMGLLDSKDALIAISNSGESTEVLYVLQYAKAL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+I IT   KS +A ++D+VL +P + E+CP  LAPT S+ + LA+GDA+A+ L++ +
Sbjct: 117 NIPVIGITGNEKSSLAKYSDVVLKIPVDREACPFNLAPTVSSTVTLALGDAIAMTLMKLK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            FS+ DF   HP G LG       D+ H+G+ +P+VK    + +AI  ++ K FG  AVV
Sbjct: 177 GFSQEDFAKRHPAGALGRKLRLVKDLYHTGEEVPIVKEDTSMKEAIIEMTAKGFGATAVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +E  KL GIIT+GD+ R  ++         +DVM KNPK I  D L   A++ +  HNI+
Sbjct: 237 NEEGKLVGIITDGDLRRFVNRGGSFENTRAKDVMTKNPKTIKPDELALKALRKMEDHNIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
           VL+VV++  + IGI+H  D+L+ 
Sbjct: 297 VLIVVNEENEPIGILHMHDILKA 319


>gi|330501877|ref|YP_004378746.1| KpsF/GutQ family protein [Pseudomonas mendocina NK-01]
 gi|328916163|gb|AEB56994.1| KpsF/GutQ family protein [Pseudomonas mendocina NK-01]
          Length = 324

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 194/323 (60%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E   +  L   +  +    F  A E I    GRVV+ G+GKSGHIG+K
Sbjct: 6   DLIDSAQRTIRLELEAVQELLPRINAD----FIKACELILNCNGRVVVVGMGKSGHIGNK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT +FFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 62  IAATLASTGTTAFFVHPAEASHGDMGMITKDDIVLALSNSGSTAEIVTLLPLIKRLGIRL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGNPDSPLAKAAEVNLDARVSQEACPLNLAPTSSTTASLVLGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   +VMH  D++P V  G  L DA+  +++K  G   V++E 
Sbjct: 182 EDFAFSHPGGALGRRLLLKVENVMHKDDALPRVHRGTSLRDALLEMTQKGLGMTVVLEED 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI T+GD+ R   K  D+   S+++VM  + K    + L   A++++  H I+ L+
Sbjct: 242 GRLAGIFTDGDLRRTLDKGIDVRHASIDEVMTPHGKTARAEMLAAEALKIMEDHKINALV 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVDD    +G ++  DLLR G++
Sbjct: 302 VVDDQDNPVGALNMHDLLRAGVM 324


>gi|254522229|ref|ZP_05134284.1| arabinose 5-phosphate isomerase [Stenotrophomonas sp. SKA14]
 gi|219719820|gb|EED38345.1| arabinose 5-phosphate isomerase [Stenotrophomonas sp. SKA14]
          Length = 333

 Score =  369 bits (948), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/337 (41%), Positives = 201/337 (59%), Gaps = 7/337 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
                    S+   S V    R    E++ L+++ + L       F  A + I + +GRV
Sbjct: 1   MAEPLLPPRSVDPASLVASGRRVFDIEQQALNAVAARL----GEAFQQACQAILSSRGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V TG+GKSGHI  K+A+TLASTGTP+F+VH  EA HGDLGMIT DD+++ LS+SG SDE+
Sbjct: 57  VATGMGKSGHIARKIAATLASTGTPAFYVHPGEAGHGDLGMITEDDVVLALSYSGESDEV 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +L   +R    LI++T   +S +A  ADI L +    E+CP  LAPT+S    LA+GD
Sbjct: 117 LMLLPVLKRQGNLLISMTGRPQSSLASAADIHLDVSVPAEACPLDLAPTSSTTASLAMGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+ G  L +A+  +
Sbjct: 177 ALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHTGDDLPRVEAGASLSEALMEM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           S KR G  AVVD    L G+ T+GD+ R      D+ T  + DVM +NP+ I  D L   
Sbjct: 237 SRKRLGMTAVVDADGVLIGLFTDGDLRRALDSALDVRTAKIADVMTRNPRTIGADQLAVE 296

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A +L+  H I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 297 AARLMETHKITGLIVVDGQGRAVGALNIHDLLRARVV 333


>gi|330828000|ref|YP_004390952.1| putative sugar phosphate isomerase involved in capsule formation
           [Aeromonas veronii B565]
 gi|328803136|gb|AEB48335.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Aeromonas veronii B565]
          Length = 331

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 194/319 (60%), Gaps = 7/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A   +  EK+ +  L   L       F  A E +    G++V+TG+GKSGHIGSK+A+T
Sbjct: 17  SARAVLDTEKQAIDGLYQYLND----AFDKACEMVLRCGGKIVVTGMGKSGHIGSKIAAT 72

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FF+H  EASHGDLGMI+  DLII +S SG SDE+ A+L   +R  IPLI +T
Sbjct: 73  LASTGTPAFFLHPGEASHGDLGMISSGDLIIAISNSGESDEILALLPVLKRRGIPLICMT 132

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A++ L +  E E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 133 GNPASTMAKEANVHLCIKVEKEACPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFA 192

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG  L +   D+MHSGD +P V I   +  A+  +S K  G  AVVD    L 
Sbjct: 193 LSHPGGSLGKRLLLRVGDLMHSGDLLPRVGIDATISQALLEVSRKGLGMTAVVDGNGLLA 252

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+ T+GD+ R   +  D++   +  VM  N   +  + +   A++L+    I+ L+VVD+
Sbjct: 253 GLFTDGDLRRILDQQIDIHHTPISRVMTANCVTVGPEMMAAEAVKLMETRKINGLLVVDE 312

Query: 323 CQKAIGIVHFLDLLRFGII 341
            ++ +G  +  DLL+ G+I
Sbjct: 313 EKRPLGAFNMHDLLKAGVI 331


>gi|332716507|ref|YP_004443973.1| capsule expression protein [Agrobacterium sp. H13-3]
 gi|325063192|gb|ADY66882.1| capsule expression protein [Agrobacterium sp. H13-3]
          Length = 331

 Score =  369 bits (947), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/330 (52%), Positives = 241/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +  +   L++++ ++ A+R+I  E+ GL++LE +L+  LS  F  A+E I    GR++IT
Sbjct: 1   MITRAVKLVEDNAIESAVRTISMERAGLAALEEALRNGLSEPFCKAIETIGQSNGRLIIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI  DD+++ +S  G S EL++I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESSELRSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y+RRFSIPLIA+T    + +A  ADIVL +P E E+CP GLAPTTS +MQLA+GDALA
Sbjct: 121 INYSRRFSIPLIALTCSESASLAKAADIVLLVPNEQEACPLGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+RNF+  DF V HPGGKLG      SD+MH+GD +PLV  G  + +A+++LS K 
Sbjct: 181 VALLEARNFTAGDFKVFHPGGKLGAGLTLVSDIMHTGDRVPLVGKGTSMPEAVSVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV ++DE  +L GI+TEGD+ RN  ++L  L+V+D+M + PK + +  L T A+  L 
Sbjct: 241 FGCVGILDEDGRLCGIVTEGDMARNLSRNLAELTVDDIMTRTPKTVKKSVLATSALATLE 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +I  L+VVDD  + IG+VHF DLLR G+
Sbjct: 301 KFHIGALIVVDDDNRPIGLVHFHDLLRIGV 330


>gi|149378025|ref|ZP_01895749.1| hypothetical protein MDG893_01450 [Marinobacter algicola DG893]
 gi|149357680|gb|EDM46178.1| hypothetical protein MDG893_01450 [Marinobacter algicola DG893]
          Length = 326

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/329 (41%), Positives = 201/329 (61%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++    +  + ALR+I  E+  + +L   +       F  A E I A KGRVV+TG+GKS
Sbjct: 2   NTETSQTFRKSALRAIEIEREAIQALTDRIDER----FVRACEVIMACKGRVVVTGMGKS 57

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG++ E+  IL   +
Sbjct: 58  GHIGNKIAATLASTGTPSFFVHPGEASHGDLGMITSQDVVLGISNSGNTSEVLTILPLIK 117

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   PLI++T    S++A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE
Sbjct: 118 RMGAPLISMTGNENSILAREAVANLDISVAQEACPLGLAPTSSTTATLVMGDALAVALLE 177

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R FS  DF + HPGG LG    +  +D+MH+GD IP V+    L  A+  +S K  G  
Sbjct: 178 ARGFSTEDFALSHPGGSLGRRLLLRVTDIMHTGDQIPRVQEDTTLSGALLEISRKGLGMT 237

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V++ G  L G+ T+GD+ R   +  D++   + +VM +N +VI +D L   A+ ++ + 
Sbjct: 238 TVINAGGDLIGVFTDGDLRRTLDRSVDIHNTPIAEVMTRNGRVIHDDQLAAEALNMMEEL 297

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L V++   +  G ++  DLLR G+I
Sbjct: 298 KINALPVINRDGQLTGAINMHDLLRAGVI 326


>gi|15891176|ref|NP_356848.1| capsule expression protein [Agrobacterium tumefaciens str. C58]
 gi|15159530|gb|AAK89633.1| capsule expression protein [Agrobacterium tumefaciens str. C58]
          Length = 331

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 172/330 (52%), Positives = 240/330 (72%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +  +   L++++ ++ A+R+I  E+ GL++LE +L+  LS  F  A+E I    GR++IT
Sbjct: 1   MITRAVKLVEDNAIESAVRTISMERAGLAALEDALRNGLSEPFCKAIETIGQSNGRLIIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI  DD+++ +S  G S EL++I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESAELRSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y+RRFSIPLIA+T    S +A  +DIVL +P E E+CP GLAPTTS +MQLA+GDALA
Sbjct: 121 INYSRRFSIPLIALTCSENSSLARASDIVLLVPNEQEACPLGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+RNF+  DF V HPGGKLG      SD+MH+GD +PLV  G  + +A+ +LS K 
Sbjct: 181 VALLEARNFTAGDFKVFHPGGKLGASLTLVSDIMHTGDRVPLVNKGTAMPEAVGVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV ++DE  +L GI+TEGD+ RN  ++L  L V+D+M ++PK + +  L T A+  L 
Sbjct: 241 FGCVGILDEDGRLCGIVTEGDMARNLSRNLAELVVDDIMTRSPKTVKKSVLATSALATLE 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +I  L+VVDD  + IG+VHF DLLR G+
Sbjct: 301 KFHIGALIVVDDDNRPIGLVHFHDLLRIGV 330


>gi|26987693|ref|NP_743118.1| KpsF/GutQ family protein [Pseudomonas putida KT2440]
 gi|24982379|gb|AAN66582.1|AE016286_6 KpsF/GutQ family protein [Pseudomonas putida KT2440]
          Length = 324

 Score =  368 bits (946), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   + +L + +       F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLELEAVEALLARI----DDNFVKACELILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 KLISLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+GD +P V  G  L DA+  +S K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ 
Sbjct: 240 ADGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDREDRPTGALNMHDLLRAGVM 324


>gi|325916426|ref|ZP_08178698.1| KpsF/GutQ family protein [Xanthomonas vesicatoria ATCC 35937]
 gi|325537346|gb|EGD09070.1| KpsF/GutQ family protein [Xanthomonas vesicatoria ATCC 35937]
          Length = 333

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 143/342 (41%), Positives = 206/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRPGSSLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHGGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD+  +L G+ T+GD+ R    D++  S  + +VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDDDGRLIGLFTDGDLRRALDSDIDVRSAGIAEVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|89093952|ref|ZP_01166897.1| hypothetical protein MED92_01609 [Oceanospirillum sp. MED92]
 gi|89081838|gb|EAR61065.1| hypothetical protein MED92_01609 [Oceanospirillum sp. MED92]
          Length = 323

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 137/327 (41%), Positives = 195/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A R+I  E   +S L   L       F+ A + +    GRV++TG+GKSGH
Sbjct: 1   MTNPDFLGSARRTIKLEAEAVSDLLDFL----DDSFNQACKIMLNCSGRVIVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVH  EASHGDLGMIT +D++I LS SG + E+  I+   +R 
Sbjct: 57  IGKKIAATLASTGTPAFFVHPGEASHGDLGMITPNDVVIALSNSGETAEVVTIIPLLKRM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           + PLI+IT+   S ++   D  L +  E E+CP  LAPT+S   QL +GDALAIALLE++
Sbjct: 117 NTPLISITANPASTLSSAGDANLHIGVEKEACPLDLAPTSSTTAQLVLGDALAIALLEAK 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            FS  DF   HPGG LG    +  SD+MH+   IP V  G PL DA+  ++ KR G   +
Sbjct: 177 GFSAEDFAFSHPGGSLGRRLLLKVSDIMHADQDIPKVLSGTPLKDALIEVTRKRLGMTTI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD+   L+GI T+GD+ R   +  DL T S++ VM  +   +  + L    +Q++ Q  I
Sbjct: 237 VDQNNVLQGIFTDGDLRRALDQNVDLQTTSIDAVMTPDGTTVTAEMLAAECLQIMEQRKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V D     +G ++  DLL+ G+I
Sbjct: 297 NALIVTDQDNHPVGALNMHDLLKAGVI 323


>gi|167031979|ref|YP_001667210.1| KpsF/GutQ family protein [Pseudomonas putida GB-1]
 gi|166858467|gb|ABY96874.1| KpsF/GutQ family protein [Pseudomonas putida GB-1]
          Length = 324

 Score =  368 bits (945), Expect = e-100,   Method: Composition-based stats.
 Identities = 141/325 (43%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   + +L + +       F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLELEAVEALLARI----DDNFVKACELILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 KLISLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTASLVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD +P V  G  L DA+  +S K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDELPQVPRGTLLKDALLEMSRKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  H I  
Sbjct: 240 PDGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKIGA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDREDRPTGALNMHDLLRAGVM 324


>gi|313497326|gb|ADR58692.1| KpsF/GutQ family protein [Pseudomonas putida BIRD-1]
          Length = 324

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 200/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   + +L + +       F  A + I   KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLELEAVEALLARI----DDNFVKACKVILTSKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L    E E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 KLISLTGNPDSPLAQAAEVNLDARVEQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+GD +P V  G  L DA+  +S K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ 
Sbjct: 240 ADGKLAGIFTDGDLRRSLDRNIDVHTTPIDQVMTVHGKTARADMLAAEALKIMEDHKINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDREDRPTGALNMHDLLRAGVM 324


>gi|121998900|ref|YP_001003687.1| KpsF/GutQ family protein [Halorhodospira halophila SL1]
 gi|121590305|gb|ABM62885.1| KpsF/GutQ family protein [Halorhodospira halophila SL1]
          Length = 339

 Score =  368 bits (944), Expect = e-100,   Method: Composition-based stats.
 Identities = 136/318 (42%), Positives = 197/318 (61%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
               +  E   +++L   +       F  A   + A +GRV++TG+GKSGHIGSK+A+TL
Sbjct: 26  GRAVLQLEADAVAALGERIDQ----PFSEACRHMLACRGRVIVTGMGKSGHIGSKMAATL 81

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGM+T DD+++ LS SG +DEL AI+   +R  +PLIA+T 
Sbjct: 82  ASTGTPAFFVHPGEASHGDLGMVTADDVVVALSNSGETDELTAIVPLIKRLGVPLIALTG 141

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +A  A + L +  E E+CP GLAPT S    LA+GDALA+ALL++R F+  DF  
Sbjct: 142 RPGSTLAQAASVHLDVSVEQEACPLGLAPTASTTASLAMGDALAVALLDARGFTAEDFAR 201

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGGKLG    +   D+M +G+ +P V+ G PL DA+  +S K  G  A+VDE  ++ G
Sbjct: 202 SHPGGKLGRRLLLHIDDIMQTGERVPRVQPGTPLRDALLEISRKGLGMTAIVDEQHRVLG 261

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   +  D++   +E VM  +P+    D L   A + + +H I+ L+V D  
Sbjct: 262 IFTDGDLRRTLDRGADIHQTPIEAVMTPSPQTASPDLLAAEAAERMERHRINGLLVTDAE 321

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G ++  DLLR G++
Sbjct: 322 GRLVGALNMHDLLRAGVV 339


>gi|148546239|ref|YP_001266341.1| KpsF/GutQ family protein [Pseudomonas putida F1]
 gi|148510297|gb|ABQ77157.1| KpsF/GutQ family protein [Pseudomonas putida F1]
          Length = 324

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   + +L + +       F  A E I   KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLELEAVEALLARI----DDNFVKACELILTSKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 KLISLTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+GD +P V  G  L DA+  +S K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGDDLPQVPRGTLLKDALLEMSHKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ 
Sbjct: 240 PDGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDHEDRPTGALNMHDLLRAGVM 324


>gi|192289375|ref|YP_001989980.1| KpsF/GutQ family protein [Rhodopseudomonas palustris TIE-1]
 gi|192283124|gb|ACE99504.1| KpsF/GutQ family protein [Rhodopseudomonas palustris TIE-1]
          Length = 337

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 171/340 (50%), Positives = 239/340 (70%), Gaps = 4/340 (1%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +H K  T    S    + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I
Sbjct: 1   MALSKNHTKIPT---MSEQAAAAIPSALRTLEAEASGVTALATALQSDLGVRFAATIDLI 57

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +  KGR++ITG+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SW
Sbjct: 58  QNAKGRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSW 117

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG   E+K ++ YA+RF I L+A+TS+  S +A  AD+ LTLPK  E+CPH LAPTTS++
Sbjct: 118 SGEQPEMKNLINYAKRFKIALVAMTSDPTSTLATAADVSLTLPKAREACPHNLAPTTSSL 177

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           M LA+GDALAIALLESR F+  DF VLHPGGKLG +   A D+MH+G++IPL  +G  + 
Sbjct: 178 MMLALGDALAIALLESRGFTPGDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTRMS 237

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+  +S K FGCV ++D   ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + 
Sbjct: 238 DALVEMSAKGFGCVGIIDSNGQIAGIVTDGDLRRNMRSDLMTATVDEVMTRNPKTISPNL 297

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L   A++LL    I+ L+V  + +K +GIVH  DLLR G+
Sbjct: 298 LAGQALELLNSSKITALLVA-EGKKPLGIVHLHDLLRAGV 336


>gi|116253816|ref|YP_769654.1| arabinose 5-phosphate isomerase [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115258464|emb|CAK09568.1| putative arabinose 5-phosphate isomerase [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 331

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 183/330 (55%), Positives = 247/330 (74%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I +E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIESERRGLEALEQAFDNGLAGPFTRAVEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEGSSLAAAADIVLLIPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  LSV+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEDGRLCGIVTEGDMARNLTRNLAELSVDDIMTRTPKTVRPTVLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDDDRRPVGLVHFHDLLRIGV 330


>gi|39933956|ref|NP_946232.1| CBS/sugar isomerase domain containing protein [Rhodopseudomonas
           palustris CGA009]
 gi|39647803|emb|CAE26323.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Rhodopseudomonas palustris CGA009]
          Length = 337

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 171/340 (50%), Positives = 241/340 (70%), Gaps = 4/340 (1%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +H K+ T    S    + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I
Sbjct: 1   MALSKNHTKTPT---MSEQAAAAIPSALRTLEAEASGVTALATALQSDLGVRFAATIDLI 57

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +  KGR++ITG+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SW
Sbjct: 58  QNAKGRLIITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSW 117

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG   E+K ++ YA+RF I L+A+TS++ S +A  AD+ LTLPK  E+CPH LAPTTS++
Sbjct: 118 SGEQPEMKNLINYAKRFKIALVAMTSDSTSTLATAADVSLTLPKAREACPHNLAPTTSSL 177

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           M LA+GDALAIALLESR F+  DF VLHPGGKLG +   A D+MH+G++IPL  +G  + 
Sbjct: 178 MMLALGDALAIALLESRGFTPGDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTRMS 237

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           DA+  +S K FGCV ++D   ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + 
Sbjct: 238 DALVEMSAKGFGCVGIIDSNGQIAGIVTDGDLRRNMRSDLMTATVDEVMTRNPKTISPNL 297

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L   A++LL    I+ L+V  + +K +GIVH  DLLR G+
Sbjct: 298 LAGQALELLNSSKITALLVA-EGKKPLGIVHLHDLLRAGV 336


>gi|21232228|ref|NP_638145.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66767643|ref|YP_242405.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|188990759|ref|YP_001902769.1| arabinose-5-phosphate isomerase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21113987|gb|AAM42069.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. ATCC 33913]
 gi|66572975|gb|AAY48385.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. campestris str. 8004]
 gi|167732519|emb|CAP50713.1| arabinose-5-phosphate isomerase [Xanthomonas campestris pv.
           campestris]
          Length = 333

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 144/342 (42%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L++L + +       F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEQAALAALGARI----GAPFAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRPASTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHGGDELPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  + +VM +NPK I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDAQERLIGLFTDGDLRRALDSDIDVRSAGIAEVMTRNPKTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|269200087|gb|ACZ28670.1| putative KspF/GutQ family protein [Pseudomonas putida]
          Length = 324

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   + +L + +       F  A E I   KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLELEAVEALLARI----DDNFVKACELILTSKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L + +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPFIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 KLISLTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+GD +P V  G  L DA+  +S K  G   +VD
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGDDLPQVSRGTLLKDALLEMSHKGLGMTVIVD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    D L   A++++  H I+ 
Sbjct: 240 ADGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARADMLAAEALKIMEDHKINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDREDRPTGALNMHDLLRAGVM 324


>gi|209884073|ref|YP_002287930.1| arabinose 5-phosphate isomerase [Oligotropha carboxidovorans OM5]
 gi|209872269|gb|ACI92065.1| arabinose 5-phosphate isomerase [Oligotropha carboxidovorans OM5]
          Length = 336

 Score =  367 bits (943), Expect = 1e-99,   Method: Composition-based stats.
 Identities = 167/331 (50%), Positives = 231/331 (69%), Gaps = 1/331 (0%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S T   H+   +  V  ALR++ +E  G+++L ++L+  L   F  A+  I+  KGRV++
Sbjct: 6   SQTAPDHAAPLSPAVDSALRTLASEADGVAALATALRTTLRPAFDDAIALIQNAKGRVIV 65

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GKSGHIG K+A+T ASTGTPSFFVHAAEASHGDLGMIT DD+I+ LSWSG + EL+ 
Sbjct: 66  TGLGKSGHIGRKIAATFASTGTPSFFVHAAEASHGDLGMITADDVIMALSWSGETAELRN 125

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ Y+RRF I LIA+TS+  S +   AD+VL LPK PE+CP+ LAPTTS++MQLA+GDA+
Sbjct: 126 LITYSRRFRIQLIALTSDPASTLGKAADVVLALPKAPEACPNNLAPTTSSLMQLALGDAI 185

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           AIALLE R F+  DF VLHP GKLG +     D+MH   SIP+  +G P+ DA+  ++ K
Sbjct: 186 AIALLEGRGFTAIDFSVLHPSGKLGAMLKFVRDLMHESASIPVKPLGTPMSDALVEMTSK 245

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            FGCVA++D   ++ GI+T+GD+ R+   DL T  V+DVM +NPK I  D L + A+++L
Sbjct: 246 GFGCVAIIDGRGEIAGIVTDGDLRRHMRPDLMTARVDDVMTRNPKTISPDLLASEALEIL 305

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               I+ L+V    +  +GIVH  D+LR G+
Sbjct: 306 NSSKITALIVT-RGKTPVGIVHLHDILRAGV 335


>gi|190573143|ref|YP_001970988.1| putative arabinose 5-phosphate isomerase [Stenotrophomonas
           maltophilia K279a]
 gi|190011065|emb|CAQ44674.1| putative arabinose 5-phosphate isomerase [Stenotrophomonas
           maltophilia K279a]
          Length = 333

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 140/331 (42%), Positives = 196/331 (59%), Gaps = 7/331 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              S+     V    R    E++ L ++   L       F  A + I A +GRVV TG+G
Sbjct: 7   PPRSVDPAGLVASGRRVFEIERQALDAVADRL----GEAFQQACQAILASRGRVVATGMG 62

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHI  K+A+TLASTGTP+F+VH  EA HGDLGMIT DD+++ LS+SG SDE+  +L  
Sbjct: 63  KSGHIARKIAATLASTGTPAFYVHPGEAGHGDLGMITEDDVVLALSYSGESDEVLMLLPV 122

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R    LI++T   +S +A  ADI L +    E+CP  LAPT+S    LA+GDALA+AL
Sbjct: 123 LKRQGNLLISMTGRPQSSLAAAADIHLDVSVPAEACPLALAPTSSTTASLAMGDALAVAL 182

Query: 194 LESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L++R F+ +DF   HP G LG    +  +DVMH+GD +P V     L +A+  +S KR G
Sbjct: 183 LDARGFTADDFARSHPAGSLGRRLLLHITDVMHTGDDLPSVGADASLSEALVEMSRKRLG 242

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             AVVD    L G+ T+GD+ R      D+ T  + DVM +NP+ I  D L   A +L+ 
Sbjct: 243 MTAVVDADGVLIGLFTDGDLRRALDSALDVRTAKIADVMTRNPRTIGADQLAVEAARLME 302

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            H I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 303 THKITGLIVVDGQGRAVGALNIHDLLRARVV 333


>gi|241206297|ref|YP_002977393.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
 gi|240860187|gb|ACS57854.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM1325]
          Length = 331

 Score =  367 bits (942), Expect = 2e-99,   Method: Composition-based stats.
 Identities = 183/330 (55%), Positives = 246/330 (74%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVISDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEGSSLAAAADIVLLMPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +DVMH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADVMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEDGRLCGIVTEGDMARNLTRNLAELTVDDIMTRTPKTVKPTVLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDDDRRPVGLVHFHDLLRIGV 330


>gi|163782859|ref|ZP_02177855.1| polysialic acid capsule expression protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881980|gb|EDP75488.1| polysialic acid capsule expression protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 323

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 197/323 (60%), Gaps = 6/323 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A R I  E RG+  L+ SL       F  AVE I   +G+V++TGIGKSGH
Sbjct: 1   MNPEDILSRARRVIEEEVRGIERLKESL----GEDFLRAVELILNCEGKVIVTGIGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+AST ASTGTP+ F+H +EA HGDLG+I R D++I +S SG S E+  +L Y R  
Sbjct: 57  VGRKIASTFASTGTPAHFLHPSEALHGDLGVIDRGDVVIAISNSGESAEVVQVLPYIRML 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             PLIAIT+   S +A ++D+ L L  + E+CP  LAPTTS+   L +GDALA+ +LE +
Sbjct: 117 GNPLIAITNRKNSTLAKYSDVHLFLNIDREACPLQLAPTTSSTATLVLGDALAMTVLELK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+E DF + HPGG LG       D+ H+G+ +P+V+   P+ + +  +S K FG  AVV
Sbjct: 177 GFTEKDFALRHPGGSLGRRLRLVRDLYHTGEELPVVREDTPMGEVVLEMSSKGFGATAVV 236

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+  KL GIIT+GD+ R      DLN     DVM  NPK    + +   A++ + +H I+
Sbjct: 237 DDSGKLVGIITDGDLRRFVKGGGDLNRSVARDVMTPNPKTTKAEEMALEALRRMEEHKIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
           VL+ VD+  K  GI+H  D+LR 
Sbjct: 297 VLIAVDEENKPEGIIHLHDILRA 319


>gi|294338654|emb|CAZ86983.1| Arabinose 5-phosphate isomerase [Thiomonas sp. 3As]
          Length = 332

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 192/326 (58%), Gaps = 4/326 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
               VQ A  ++  E R L SL   L    LS  F  AV+ I    GRVV++G+GKSGH+
Sbjct: 7   PERAVQLARDTLDIEARALLSLRERLAAPPLSSAFAQAVQCILRSGGRVVVSGMGKSGHV 66

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+T ASTGTP++FVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R  
Sbjct: 67  GRKIAATFASTGTPAYFVHPAEASHGDLGMVTRDDVFLALSNSGETEELTRIVPQVKRLG 126

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI++T    S +A HADI+L    E E+CP  LAPT S   QLA+GDALA+ALL++R 
Sbjct: 127 ATLISMTGRTDSTLARHADILLDCAVEQEACPLNLAPTASTTAQLALGDALAVALLDARG 186

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG        DVM S +++P V    P   A+  ++ K  G  AVV
Sbjct: 187 FGPEDFARTHPGGSLGRKLLTHVRDVMRSAEAVPSVTEEAPFTAALMEITRKGLGMTAVV 246

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    L GIIT+GD+ R   K  +LNTL  +  M   P  I  D L   A+QL+ Q+ I+
Sbjct: 247 DAHGVLAGIITDGDLRRLIEKGANLNTLQAQQAMHPQPHTIGPDALAVEAVQLMEQYRIN 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD   K +G ++  DL    +I
Sbjct: 307 QLLVVDAQGKPVGALNMHDLFAAKVI 332


>gi|225849730|ref|YP_002729964.1| arabinose 5-phosphate isomerase [Persephonella marina EX-H1]
 gi|225645139|gb|ACO03325.1| arabinose 5-phosphate isomerase [Persephonella marina EX-H1]
          Length = 321

 Score =  366 bits (940), Expect = 3e-99,   Method: Composition-based stats.
 Identities = 138/326 (42%), Positives = 207/326 (63%), Gaps = 7/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   S  Q   + +  E+  L    S+L       F  AVE I   KG+VV+TG+GKSG 
Sbjct: 1   MKDKSPSQIGKKVLEEERNALQKTLSALDN----NFDKAVELILNTKGKVVVTGMGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTPSFF+H AEA HGDLGMI+++D+++ +S SG + EL AI+   +R+
Sbjct: 57  VGKKIAATLASTGTPSFFLHPAEAIHGDLGMISKEDIVLAISNSGETPELLAIIPTIKRW 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I+IT+   S +A  +DI L L  E E+CP  LAPT+S+   LA+GDALA+ALLE R
Sbjct: 117 GNKVISITNNKNSTLAKESDIHLYLNIEREACPLNLAPTSSSTATLALGDALAVALLEMR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+  DF   HPGG LG   +  S++MH G+ +P+V     L + + ++SEK FG   ++
Sbjct: 177 GFTAEDFARFHPGGSLGRKLMRVSEIMHRGEELPVVHPETELKETVIVMSEKGFGAALII 236

Query: 258 DEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           ++   L GIIT+GD+ R   K   ++    E+ M  NPK I +D L+  A++++ ++NI+
Sbjct: 237 NKDGDLTGIITDGDLRRFIKKGGSIDRSLTEEAMTVNPKYINKDILVVEALEIMERYNIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VV + +K +G+VH  D+L+ G+I
Sbjct: 297 VLPVV-EDKKPVGLVHLHDILKSGVI 321


>gi|188996349|ref|YP_001930600.1| KpsF/GutQ family protein [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931416|gb|ACD66046.1| KpsF/GutQ family protein [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 315

 Score =  366 bits (939), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 141/321 (43%), Positives = 202/321 (62%), Gaps = 9/321 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A ++I  E   L+ L+ SL       F  AV  I   KG+VVITGIGKSG +G K+
Sbjct: 2   ILDIAKKTIDEEINALNRLKDSL----DENFEKAVNLILNCKGKVVITGIGKSGIVGKKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           +ST +STGTPSFF+H AEA HGDLGM+ ++DLI+ +S SG + EL AI+   +R+   +I
Sbjct: 58  SSTFSSTGTPSFFLHPAEAIHGDLGMVEKEDLILAISNSGETPELIAIIPILKRWGNKII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           +IT++  S +A ++D+VL L  + E+CP  LAPT+++   L +GDALA+ALL  R F E 
Sbjct: 118 SITNKKDSTLAKYSDVVLYLNVDKEACPLNLAPTSTSTATLVLGDALAVALLTLRGFKEE 177

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +    +M     +PL     PL +AI  +SEK  G V +VD+   
Sbjct: 178 DFAKFHPGGSLGKKLMKVEHIMRK--DLPLSYTDAPLREAIIEMSEKGLGAVLIVDKNNN 235

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R  +K   ++    +DVM KNPKV  +   +  A++L+ ++NI+VL VV
Sbjct: 236 LVGIITDGDLRRFINKGGSIDNSLAKDVMTKNPKVAEKHWYVLQALELMERYNITVLPVV 295

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K IGIVH  D+L+ G+I
Sbjct: 296 ENS-KPIGIVHIHDILKSGVI 315


>gi|194364737|ref|YP_002027347.1| KpsF/GutQ family protein [Stenotrophomonas maltophilia R551-3]
 gi|194347541|gb|ACF50664.1| KpsF/GutQ family protein [Stenotrophomonas maltophilia R551-3]
          Length = 333

 Score =  365 bits (938), Expect = 4e-99,   Method: Composition-based stats.
 Identities = 140/331 (42%), Positives = 196/331 (59%), Gaps = 7/331 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              S+     V    R    E++ L ++   L       F  A + I A +GRVV TG+G
Sbjct: 7   PPRSVDPAGLVASGRRVFEIERQALDAVADRL----GEAFQQACQAILASRGRVVATGMG 62

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHI  K+A+TLASTGTP+F+VH  EA HGDLGMIT DD+++ LS+SG SDE+  +L  
Sbjct: 63  KSGHIARKIAATLASTGTPAFYVHPGEAGHGDLGMITEDDVVLALSYSGESDEVLMLLPV 122

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R    LI++T   +S +   ADI L +    E+CP  LAPT+S    LA+GDALA+AL
Sbjct: 123 LKRQGNVLISMTGRPQSSLGTAADIHLDVSVPAEACPLALAPTSSTTASLAMGDALAVAL 182

Query: 194 LESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L++R F+ +DF   HP G LG    +  +DVMH+GD +P V  G  L +A+  +S KR G
Sbjct: 183 LDARGFTADDFARSHPAGSLGRRLLLHITDVMHTGDDLPSVGAGASLSEALMEMSRKRLG 242

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             AVVD    L G+ T+GD+ R      D+ T  + DVM +NP+ I  D L   A +L+ 
Sbjct: 243 MTAVVDADGVLIGLFTDGDLRRALDSALDVRTAKIADVMTRNPRTIGADQLAVEAARLME 302

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            H I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 303 THKITGLIVVDGQGRAVGALNIHDLLRARVV 333


>gi|296134692|ref|YP_003641934.1| KpsF/GutQ family protein [Thiomonas intermedia K12]
 gi|295794814|gb|ADG29604.1| KpsF/GutQ family protein [Thiomonas intermedia K12]
          Length = 332

 Score =  365 bits (938), Expect = 5e-99,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 192/326 (58%), Gaps = 4/326 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
               VQ A  ++  E R L SL   L    LS  F  AV+ I    GRVV++G+GKSGH+
Sbjct: 7   PERAVQLARDTLDIEARALLSLCERLAAPPLSSAFAQAVQCILRSPGRVVVSGMGKSGHV 66

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+T ASTGTP++FVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R  
Sbjct: 67  GRKIAATFASTGTPAYFVHPAEASHGDLGMVTRDDVFLALSNSGETEELTRIVPQVKRLG 126

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI++T    S +A HADI+L    E E+CP  LAPT S   QLA+GDALA+ALL++R 
Sbjct: 127 ATLISMTGRTDSTLARHADILLDCAVEQEACPLNLAPTASTTAQLALGDALAVALLDARG 186

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG        DVM S +++P V    P   A+  ++ K  G  AVV
Sbjct: 187 FGPEDFARTHPGGSLGRKLLTHVRDVMRSAEAVPSVTGDAPFTAALMEITRKGLGMTAVV 246

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    L GIIT+GD+ R   K  +LNTL  +  M   P  I  D L   A+QL+ Q+ I+
Sbjct: 247 DAHGVLAGIITDGDLRRLIEKGANLNTLQAQQAMHPQPHTIGPDALAVEAVQLMEQYRIN 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD   K +G ++  DL    +I
Sbjct: 307 QLLVVDAQGKPVGALNMHDLFAAKVI 332


>gi|92114343|ref|YP_574271.1| KpsF/GutQ family protein [Chromohalobacter salexigens DSM 3043]
 gi|91797433|gb|ABE59572.1| KpsF/GutQ family protein [Chromohalobacter salexigens DSM 3043]
          Length = 326

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 134/329 (40%), Positives = 197/329 (59%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           +++  +     A R++  E   +++L   L       F  A +   A +GR+++TG+GKS
Sbjct: 2   NTVTDHDYRASARRTLTLESHAVAALIERL----DEAFDHACQLFLACEGRIIVTGMGKS 57

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+F+VH  EASHGD+GMIT  D+++ LS SG + E+ A+L   +
Sbjct: 58  GHIARKIAATLASTGTPAFYVHPGEASHGDMGMITARDVVLALSNSGETAEVTALLPLLK 117

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   PL+++T    S +A HA+  L    + E+CP  LAPT S    LA+GDALA+ALLE
Sbjct: 118 RMGTPLVSMTGRPGSSLARHAEAHLDTAVDREACPLDLAPTASTTAALAMGDALAVALLE 177

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF + HPGG LG    +   D+MH GD +P V +G PL DA+  ++ +  G  
Sbjct: 178 ARGFTAEDFALSHPGGSLGRRLLLKVEDLMHQGDRLPRVALGSPLRDALLEITRQGLGFT 237

Query: 255 AVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V+DE  +L G+ T+GD+ R    H DL  L V+DVM    K I    L   A++++  +
Sbjct: 238 CVLDEDGRLAGVYTDGDLRRTLDHHDDLRQLRVDDVMTHGGKTIRPQLLAAEAVKIMEDN 297

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L VVDD    +G++H  DLL  G+I
Sbjct: 298 RITALAVVDDQGHPVGVLHMHDLLASGVI 326


>gi|84622845|ref|YP_450217.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|122879082|ref|YP_199928.6| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84366785|dbj|BAE67943.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
          Length = 333

 Score =  365 bits (937), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH    T    SL     V    R +  E+  L+++ + +  E    F  A   + A
Sbjct: 1   MAVSHLPPATVSDASL-----VASGQRVLEIEREALANVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|75675124|ref|YP_317545.1| sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi
           Nb-255]
 gi|74419994|gb|ABA04193.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter winogradskyi
           Nb-255]
          Length = 325

 Score =  364 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 168/320 (52%), Positives = 224/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  ++ ALR+  AE  G+S+L ++L+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NIAIESALRTFEAEAGGVSALAAALKSDLGLAFAAATDLIRNAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF IP
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+ L  PK  E+CPH LAPTTS++MQLA+GD LAIALLE R F+
Sbjct: 126 LIAMTAERDSTLGKAADVALVQPKAREACPHNLAPTTSSLMQLALGDGLAIALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF VLHPGGKLG L     D+MHSGD+IPL  +G  + +A+  ++ K FGCV V D  
Sbjct: 186 SVDFSVLHPGGKLGALLKYTRDLMHSGDAIPLKPLGTKMSEALVEMTSKGFGCVGVTDGQ 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GD+ R+   DL T  V+DVM  +PK I  D L   A+++L    I+ L+V 
Sbjct: 246 GNLVGIVTDGDLRRHMRPDLMTARVDDVMTPHPKTIGRDLLAGEALEILNSSKITALIVT 305

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            + +K +GIVH  DLLR G+
Sbjct: 306 -EGKKPVGIVHLHDLLRAGV 324


>gi|316932423|ref|YP_004107405.1| KpsF/GutQ family protein [Rhodopseudomonas palustris DX-1]
 gi|315600137|gb|ADU42672.1| KpsF/GutQ family protein [Rhodopseudomonas palustris DX-1]
          Length = 337

 Score =  364 bits (936), Expect = 7e-99,   Method: Composition-based stats.
 Identities = 169/330 (51%), Positives = 236/330 (71%), Gaps = 1/330 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T    S    + +  ALR++ AE  G+++L ++LQ +L  +F   ++ I+  KGR++IT
Sbjct: 8   ITTHAMSEQAAAAIPSALRTLEAEASGVTALATALQADLGVRFAATIDLIQNAKGRLIIT 67

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ LSWSG   E+K +
Sbjct: 68  GLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILALSWSGEQPEMKNL 127

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + YA+RF I L+A+TS+  S +A  AD+ LTLPK  E+CPH LAPTTS++M LA+GDALA
Sbjct: 128 INYAKRFKIALVAMTSDPTSTLATAADVSLTLPKAREACPHNLAPTTSSLMMLALGDALA 187

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLESR FS  DF VLHPGGKLG +   A D+MH+G+++PL  +G  + DA+  +S K 
Sbjct: 188 IALLESRGFSPRDFSVLHPGGKLGAMLKYARDLMHTGEAVPLKPLGTRMSDALVEMSAKG 247

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV ++D   ++ GI+T+GD+ RN   DL T +V++VM +NPK I  + L   A++LL 
Sbjct: 248 FGCVGIIDANGQIAGIVTDGDLRRNMRPDLMTATVDEVMTRNPKTISPNLLAGQALELLN 307

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I+ L+V  + +K +GIVH  DLLR G+
Sbjct: 308 SSKITALLVA-EGKKPLGIVHLHDLLRAGV 336


>gi|166711216|ref|ZP_02242423.1| polysialic acid capsule expression protein [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 333

 Score =  364 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 206/342 (60%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+++ + +  E    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALANVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|294625300|ref|ZP_06703938.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|294665377|ref|ZP_06730666.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
 gi|292600421|gb|EFF44520.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 11122]
 gi|292604836|gb|EFF48198.1| polysialic acid capsule expression protein [Xanthomonas fuscans
           subsp. aurantifolii str. ICPB 10535]
          Length = 333

 Score =  364 bits (936), Expect = 8e-99,   Method: Composition-based stats.
 Identities = 142/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + + GE    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGGE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD+   L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDDDGHLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|330807559|ref|YP_004352021.1| arabinose 5-phosphate isomerase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327375667|gb|AEA67017.1| arabinose 5-phosphate isomerase [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 324

 Score =  364 bits (935), Expect = 9e-99,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   +  +    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLELEAVQGLLPQIDAD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT +FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIITLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 QLISMTGNPDSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+G  +P V  G  L DA+  ++ K  G   V++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVLRGTLLKDALMEMTRKGLGMTVVLE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R   +  D+++ ++E VM  + K    + L   A++++  H IS 
Sbjct: 240 VDGKLAGIFTDGDLRRTLDRTIDIHSATIEQVMTPHGKTARAEMLAAEALKIMEDHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVDD  + +G ++  DLLR G++
Sbjct: 300 LVVVDDEDRPVGALNMHDLLRAGVM 324


>gi|299132165|ref|ZP_07025360.1| KpsF/GutQ family protein [Afipia sp. 1NLS2]
 gi|298592302|gb|EFI52502.1| KpsF/GutQ family protein [Afipia sp. 1NLS2]
          Length = 336

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 169/318 (53%), Positives = 231/318 (72%), Gaps = 1/318 (0%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ ALR++ AE  G+++L ++LQ  L   F  A + I+  KGRV++TG+GKSGHIG K+
Sbjct: 19  AIESALRTLAAEADGVAALIATLQNGLGAPFAAATDLIRNAKGRVIVTGLGKSGHIGRKI 78

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TLASTGTP+FFVHAAEASHGDLGMIT DD+II LSWSG + EL++++ Y+RRF I LI
Sbjct: 79  AATLASTGTPAFFVHAAEASHGDLGMITPDDVIIALSWSGETAELRSLINYSRRFRIQLI 138

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+TSE++S +   AD+VL LPK  E+CP+ LAPTTSA+MQLAIGDALAIALLESR FS  
Sbjct: 139 AVTSESESTLGAAADVVLALPKAREACPNNLAPTTSALMQLAIGDALAIALLESRGFSAT 198

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF VLHP GKLG +     D+MH  +S+P+  +G P+ +A+  ++ K FGCVA+VD   +
Sbjct: 199 DFSVLHPSGKLGAMLKFVRDLMHKDESVPMKPLGTPMSEALFEMTSKGFGCVAIVDGRGE 258

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + GI+T+GD+ R+   DL T +V+ VM  NPK I  D L + A+++L    I+ L+V   
Sbjct: 259 IAGIVTDGDLRRHMRPDLMTATVDQVMTANPKTISGDLLASEALEILNASKITALIVT-K 317

Query: 323 CQKAIGIVHFLDLLRFGI 340
            +  +GI+H  DLLR G+
Sbjct: 318 GKTPVGILHLHDLLRAGV 335


>gi|238756126|ref|ZP_04617447.1| Arabinose 5-phosphate isomerase [Yersinia ruckeri ATCC 29473]
 gi|238705665|gb|EEP98061.1| Arabinose 5-phosphate isomerase [Yersinia ruckeri ATCC 29473]
          Length = 328

 Score =  364 bits (935), Expect = 1e-98,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 197/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A EKI   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKQVLKIEREGLAQLDQYINED----FTRACEKIFYCQGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGM+T  D+++ +S SG S+E+ A+    +R  IPLI +
Sbjct: 70  TFASTGTPAFFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALTPVLKRLQIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 TNNPNSSMGKAADIHLCIKVPDEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + ++  ++
Sbjct: 190 ALSHPGGALGRKLLLRISDIMHTGDEIPHVSPDASLRDALLEITRKNLGLTVICNDLMRI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    DLN   + DVM +    +  + L   A+ L++  +I+ L+V D
Sbjct: 250 EGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVRPNMLAVDALNLMQSRHITALLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|92118874|ref|YP_578603.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14]
 gi|91801768|gb|ABE64143.1| KpsF/GutQ family protein [Nitrobacter hamburgensis X14]
          Length = 325

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 171/320 (53%), Positives = 228/320 (71%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ ++ ALR+  AE  G+++L +SL+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NAAIESALRTFEAEAGGVTALAASLKSDLGPAFAAAADMIRKAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF I 
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITADDVIMALSWSGEQPEMKNLITYAKRFRIA 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+VL  P+  E+CPH LAPTTS++MQLA+GDALAIALLE R F+
Sbjct: 126 LIAMTAERDSTLGKAADVVLVQPRAREACPHNLAPTTSSLMQLALGDALAIALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF VLHPGGKLG L     D+MHSGD+IPL  +G  + DA+  ++ K FGCV V+D  
Sbjct: 186 SVDFSVLHPGGKLGALLKYTRDLMHSGDAIPLRPLGTKMSDALVEMTSKGFGCVGVIDGH 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GD+ R+   DL T+ V+DVM KNPK I  D L    +++L    I+ L+V 
Sbjct: 246 GHLVGIVTDGDLRRHMRPDLMTVRVDDVMTKNPKTIGRDLLAGEVLEILNSSKITALIVT 305

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D  +K +GIVH  DLLR G+
Sbjct: 306 D-GKKPVGIVHLHDLLRAGV 324


>gi|327479599|gb|AEA82909.1| sugar isomerase [Pseudomonas stutzeri DSM 4166]
          Length = 324

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 195/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  ++ A R+I  E   +  L       +   F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSQLIETAQRTIRLEIEAVEQL----NARIDASFVQACELILACKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT +FFVH AEASHGD+GMIT DD+++ LS SG++ E+  +L   +R  I
Sbjct: 60  RKIAATLASTGTAAFFVHPAEASHGDMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    SV+A  A + L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 TLISMTGNPSSVLAKAAAVNLDASVAIEACPLNLAPTSSTTASLVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +    VMH+G+ +P V+ G  L DA+  +++K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVEHVMHTGERLPRVRRGTSLRDALLEMTQKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L GI T+GD+ R   K  D+    +++VM  + K    + L   A++++  H IS 
Sbjct: 240 TDGRLAGIFTDGDLRRALDKGVDVRQTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISS 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+D+ +  IG ++  DLLR G++
Sbjct: 300 LVVIDEQELPIGALNMHDLLRAGVM 324


>gi|237756413|ref|ZP_04584955.1| protein GutQ [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237691429|gb|EEP60495.1| protein GutQ [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 315

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 201/321 (62%), Gaps = 9/321 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A ++I  E   L+ L+ SL       F  AV  I   KG+VVITGIGKSG +G K+
Sbjct: 2   ILDIAKKTIDEEINALNRLKDSL----DENFEKAVNLILNCKGKVVITGIGKSGIVGKKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           +ST +STGTPSFF+H AEA HGDLGM+ ++DLI+ +S SG + EL AI+   +R+   +I
Sbjct: 58  SSTFSSTGTPSFFLHPAEAIHGDLGMVEKEDLILAISNSGETPELIAIIPILKRWGNKII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           +IT++  S +A ++D+VL L  + E+CP  LAPT+++   L +GDALA+ALL  R F E 
Sbjct: 118 SITNKKDSTLAKYSDVVLYLNVDKEACPLNLAPTSTSTATLVLGDALAVALLTLRGFKEE 177

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +    +M     +PL     PL +AI  +SEK  G V +VD+   
Sbjct: 178 DFAKFHPGGSLGKKLMKVEHIMRK--DLPLSYTDTPLKEAIIEMSEKGLGAVLIVDKNDN 235

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R  +K   ++    +D M KNPKV  +   +  A++L+ ++NI+VL VV
Sbjct: 236 LVGIITDGDLRRFINKGGSIDNSFAKDAMTKNPKVAEKHWYVLQALELMERYNITVLPVV 295

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++  K IGIVH  D+L+ G+I
Sbjct: 296 ENS-KPIGIVHIHDILKSGVI 315


>gi|296391167|ref|ZP_06880642.1| hypothetical protein PaerPAb_23564 [Pseudomonas aeruginosa PAb1]
          Length = 324

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 136/323 (42%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K
Sbjct: 6   DFIHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHIGKK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 62  IAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 182 EDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 242 GKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 302 VVDADDRPVGALNMHDLLRAGVM 324


>gi|22124068|ref|NP_667491.1| D-arabinose 5-phosphate isomerase [Yersinia pestis KIM 10]
 gi|45443563|ref|NP_995102.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar Microtus
           str. 91001]
 gi|108809717|ref|YP_653633.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Antiqua]
 gi|108813619|ref|YP_649386.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|145597636|ref|YP_001161712.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides F]
 gi|170022761|ref|YP_001719266.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis
           YPIII]
 gi|186897005|ref|YP_001874117.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis
           PB1/+]
 gi|21956816|gb|AAM83742.1|AE013615_3 putative isomerase [Yersinia pestis KIM 10]
 gi|45438432|gb|AAS63979.1| putative isomerase [Yersinia pestis biovar Microtus str. 91001]
 gi|108777267|gb|ABG19786.1| hypothetical protein YPN_3459 [Yersinia pestis Nepal516]
 gi|108781630|gb|ABG15688.1| hypothetical protein YPA_3726 [Yersinia pestis Antiqua]
 gi|145209332|gb|ABP38739.1| hypothetical protein YPDSF_0320 [Yersinia pestis Pestoides F]
 gi|169749295|gb|ACA66813.1| KpsF/GutQ family protein [Yersinia pseudotuberculosis YPIII]
 gi|186700031|gb|ACC90660.1| KpsF/GutQ family protein [Yersinia pseudotuberculosis PB1/+]
          Length = 357

 Score =  363 bits (933), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 43  QAGKQVLQIEREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAA 98

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI +
Sbjct: 99  TFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICM 158

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +S  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 159 SSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 218

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++
Sbjct: 219 ALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRI 278

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D
Sbjct: 279 KGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVAD 338

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 339 GDQ-LLGVVHMHDMLRAGVV 357


>gi|152985777|ref|YP_001350366.1| hypothetical protein PSPA7_5030 [Pseudomonas aeruginosa PA7]
 gi|150960935|gb|ABR82960.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 324

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 199/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K
Sbjct: 6   DFIHSAQRTIGLERDAVDSLLARIGDD----FVRACELLLAGKGRVVVVGMGKSGHIGKK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 62  IAATLASTGTPSFFVHPAEASHGDMGMITEDDVVLALSNSGSTAEIVTLLPLIKRLGITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVSLVLGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   +VMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 182 EDFAFSHPGGALGRRLLLKVENVMHVGEELPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 242 GKLAGIFTDGDLRRALDRGVDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 302 VVDADDRPVGALNMHDLLRAGVM 324


>gi|23015177|ref|ZP_00054961.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Magnetospirillum magnetotacticum MS-1]
          Length = 330

 Score =  363 bits (932), Expect = 2e-98,   Method: Composition-based stats.
 Identities = 144/320 (45%), Positives = 205/320 (64%), Gaps = 4/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A R +  E R L SL +SL       F  AV  I+   GRVV+TG+GKSGH+  
Sbjct: 14  SEALATARRVLATEARALDSLATSL----GDAFLKAVTLIEGAPGRVVVTGMGKSGHVAR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ASTG P+F+VH AEASHGDLGM+TRDD ++ LS SG + EL  ++ Y RRF IP
Sbjct: 70  KIAATMASTGCPAFYVHPAEASHGDLGMVTRDDAVVALSNSGETPELSDVIAYTRRFEIP 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ITS + S +A  +D+ L LP  PE+CP GLAPTTS  + LA+GDALA+ LLE + F+
Sbjct: 130 LIGITSRDGSTLAAASDVALVLPPNPEACPMGLAPTTSTTLMLALGDALAVTLLERKGFT 189

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGGKLG   +  +D+MH GD +PLV     + D + +++ K  GC  V+D G
Sbjct: 190 AADFQVFHPGGKLGQRLLKVTDLMHGGDGLPLVGTEASMADVLLVMTAKSLGCAGVIDSG 249

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            KL G++T+GD+ R+   DL T    +VM  +P+ +  + L   A++ + + +I+ L VV
Sbjct: 250 GKLAGVLTDGDLRRHMSPDLLTAKAAEVMTASPRTVPPNLLAAEALRQMNERSITSLFVV 309

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +   + +G++H  D LR G+
Sbjct: 310 ESDGRPVGVLHVHDCLRAGL 329


>gi|107099958|ref|ZP_01363876.1| hypothetical protein PaerPA_01000979 [Pseudomonas aeruginosa PACS2]
          Length = 324

 Score =  363 bits (932), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K
Sbjct: 6   DFIHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 62  IAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 182 EDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 242 GKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 302 VVDADDRPVGALNMHDLLRAGVM 324


>gi|116052489|ref|YP_792802.1| hypothetical protein PA14_57890 [Pseudomonas aeruginosa UCBPP-PA14]
 gi|254238881|ref|ZP_04932204.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|313107042|ref|ZP_07793245.1| putative sugar isomerase [Pseudomonas aeruginosa 39016]
 gi|115587710|gb|ABJ13725.1| putative sugar isomerase [Pseudomonas aeruginosa UCBPP-PA14]
 gi|126170812|gb|EAZ56323.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|310879747|gb|EFQ38341.1| putative sugar isomerase [Pseudomonas aeruginosa 39016]
          Length = 326

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 136/323 (42%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGHIG K
Sbjct: 8   DFIHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHIGKK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 64  IAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 124 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTA 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 184 EDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 244 GKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 304 VVDADDRPVGALNMHDLLRAGVM 326


>gi|49088192|gb|AAT51542.1| PA4457 [synthetic construct]
          Length = 327

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K
Sbjct: 8   DFIHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 64  IAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 124 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTA 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 184 EDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 244 GKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 304 VVDADDRPVGALNMHDLLRAGVM 326


>gi|315122735|ref|YP_004063224.1| polysialic acid capsule expression protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496137|gb|ADR52736.1| polysialic acid capsule expression protein [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 323

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 257/322 (79%), Positives = 288/322 (89%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +Q AL+SI  EK+GLSSLESSL GELS  F  AVEKIKAI+GRVV+TGIGKSGHI
Sbjct: 1   MSNLAIQSALQSIEIEKKGLSSLESSLLGELSSHFSRAVEKIKAIRGRVVVTGIGKSGHI 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLAST ASTGTPSFFVHAAEA+HGDLGMIT+DD+II LSWSG S+ELKAIL +ARRFS
Sbjct: 61  GSKLASTFASTGTPSFFVHAAEANHGDLGMITQDDVIIALSWSGESNELKAILCHARRFS 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLIAITSENKS+VACHADIVL LPKEPE+CP+GLAPTTS IMQLAIGDALA+AL+E+ N
Sbjct: 121 IPLIAITSENKSIVACHADIVLKLPKEPEACPYGLAPTTSTIMQLAIGDALAMALMEAEN 180

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+ENDFY LHPGGKLG+LF CA+DVMH+G  +PLVK+G  LIDAI +LSEKRFGC+AVVD
Sbjct: 181 FTENDFYALHPGGKLGSLFTCATDVMHTGTRLPLVKMGSLLIDAIPVLSEKRFGCIAVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E Q+LKGI+TEGDIFRNF K+LN L+VED+M KNPKVI EDTLLTV+MQ L+QHNISVLM
Sbjct: 241 EDQRLKGIVTEGDIFRNFRKNLNVLTVEDIMTKNPKVISEDTLLTVSMQFLKQHNISVLM 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD  QK IGIVHFLDLLRFGI
Sbjct: 301 VVDANQKIIGIVHFLDLLRFGI 322


>gi|117617703|ref|YP_858367.1| arabinose 5-phosphate isomerase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117559110|gb|ABK36058.1| arabinose 5-phosphate isomerase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 331

 Score =  363 bits (931), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 192/319 (60%), Gaps = 7/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A   +  EK+ +  L   L       F  A E I    G++V+TG+GKSGH+GSK+A+T
Sbjct: 17  SARTVLDIEKQAIDGLYQYLND----AFDQACEMILRCSGKIVVTGMGKSGHVGSKIAAT 72

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FF+H  EASHGDLGMI+  DLII +S SG SDE+ A+L   +R  IPLI +T
Sbjct: 73  LASTGTPAFFLHPGEASHGDLGMISGGDLIIAISNSGESDEILALLPVLKRRGIPLICMT 132

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A++ L +  E E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 133 GNPASTMAKEANVHLCIKVEKEACPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFA 192

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG  L +   D+MHSG+ +P V I   +  A+  +S K  G  AV +   +L 
Sbjct: 193 LSHPGGSLGKRLLLRVGDLMHSGELLPQVGIDATISQALLEVSRKGLGMTAVANADGRLA 252

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+ T+GD+ R      D++   +  VM  N   +  + +   A++L+    I+ L+VVD 
Sbjct: 253 GLFTDGDLRRILDLQVDIHHTPISRVMTVNCVTVGPEMMAAEAVKLMETRKINGLLVVDG 312

Query: 323 CQKAIGIVHFLDLLRFGII 341
            ++ +G  +  DLL+ G+I
Sbjct: 313 DKRPLGAFNMHDLLKAGVI 331


>gi|15599653|ref|NP_253147.1| arabinose-5-phosphate isomerase KdsD [Pseudomonas aeruginosa PAO1]
 gi|218893548|ref|YP_002442417.1| putative sugar isomerase [Pseudomonas aeruginosa LESB58]
 gi|254244729|ref|ZP_04938051.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9950693|gb|AAG07845.1|AE004860_1 arabinose-5-phosphate isomerase KdsD [Pseudomonas aeruginosa PAO1]
 gi|126198107|gb|EAZ62170.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218773776|emb|CAW29590.1| putative sugar isomerase [Pseudomonas aeruginosa LESB58]
          Length = 326

 Score =  362 bits (930), Expect = 3e-98,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E+  + SL + +  +    F  A E + A KGRVV+ G+GKSGH+G K
Sbjct: 8   DFIHSAQRTIGLERDAVDSLLARIGDD----FVKACELLLAGKGRVVVVGMGKSGHVGKK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGD+GMIT+DD+++ LS SGS+ E+  +L   +R  I L
Sbjct: 64  IAATLASTGTPSFFVHPAEASHGDMGMITKDDVVLALSNSGSTAEIVTLLPLIKRLGITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T   +S +A  A++ L      E+CP  LAPT+S  + L +GDALAIALLE+R F+ 
Sbjct: 124 ISMTGNPESPLAKAAEVNLDASVGQEACPLNLAPTSSTTVTLVLGDALAIALLEARGFTA 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVMH G+ +P V +G  L  A+  ++ K  G   V+DE 
Sbjct: 184 EDFAFSHPGGALGRRLLLKVEDVMHVGEGLPQVLLGTSLTGALMEMTRKGLGMTVVLDEH 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +  D+  ++++ VM  + K +  + L   A++++  + I  L+
Sbjct: 244 GKLAGIFTDGDLRRALDRGIDVRQVTIDQVMTVHGKTVRAEILAAEALKIMEDNKIGALV 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   + +G ++  DLLR G++
Sbjct: 304 VVDADDRPVGALNMHDLLRAGVM 326


>gi|145297401|ref|YP_001140242.1| sugar phosphate isomerase [Aeromonas salmonicida subsp. salmonicida
           A449]
 gi|142850173|gb|ABO88494.1| sugar phosphate isomerase [Aeromonas salmonicida subsp. salmonicida
           A449]
          Length = 331

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 134/319 (42%), Positives = 193/319 (60%), Gaps = 7/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A   +  EK+ +  L   L       F  A E +    G++V+TG+GKSGHIGSK+A+T
Sbjct: 17  SARTVLDIEKQAIDGLYQYLND----AFDKACELVLRCSGKIVVTGMGKSGHIGSKIAAT 72

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FF+H  EASHGDLGMI+  DLII +S SG SDE+ A+L   +R  I LI +T
Sbjct: 73  LASTGTPAFFLHPGEASHGDLGMISSGDLIIAISNSGESDEILALLPVLKRRGIQLICMT 132

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  A++ L +  + E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 133 GNPASTMAKEANVHLCIKVDKEACPLGLAPTSSTTATLVMGDALAVALLEARGFTADDFA 192

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG  L +   D+MHSGD +P V I   +  A+  +S K  G  AVV++   L 
Sbjct: 193 LSHPGGSLGKRLLLRVGDLMHSGDLLPQVGIDATISQALLEVSRKGLGMTAVVNDEGLLA 252

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+ T+GD+ R      D++  S+  VM  N   +  + +   A++L+    I+ L+VVD 
Sbjct: 253 GLFTDGDLRRILDLQVDIHHTSIAKVMTTNCVTVGPEMMAAEAVKLMETRKINGLLVVDG 312

Query: 323 CQKAIGIVHFLDLLRFGII 341
            ++ +G  +  DLL+ G+I
Sbjct: 313 DKRPLGAFNMHDLLKAGVI 331


>gi|254427948|ref|ZP_05041655.1| sugar isomerase, KpsF/GutQ family [Alcanivorax sp. DG881]
 gi|196194117|gb|EDX89076.1| sugar isomerase, KpsF/GutQ family [Alcanivorax sp. DG881]
          Length = 322

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 139/326 (42%), Positives = 201/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    R +  E R + +L+ SL       F  A + +   KGRV++TG+GKSGH+
Sbjct: 1   MSHDHISVGQRVLDIEARAVDALKDSL----DASFSAACDLMLNAKGRVIVTGMGKSGHV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLA+TLASTGTPSFFVH  EASHGDLGMIT DD+++ LS SG + E+ AIL   +R  
Sbjct: 57  GSKLAATLASTGTPSFFVHPGEASHGDLGMITPDDVVLALSNSGETAEVLAILPVIKRKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ +T   +S +A  +D+ LT+    E+CPH LAPT+S    LA+GDALAIALLE+R 
Sbjct: 117 TGLVGMTGRPQSALAQLSDVHLTVAVAEEACPHNLAPTSSTTAALAMGDALAIALLEARG 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG    +   D+MH+G+ +P+V     L +A+  ++ K  G  AV 
Sbjct: 177 FTPEDFALSHPGGSLGRRLLLKVDDIMHAGEQLPVVSADTSLSEALLEMTHKGLGMTAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            +   L GI T+GD+ R F +D++    ++ +VM+ +P  I +  L   A+Q++    I+
Sbjct: 237 HDDGTLAGIFTDGDLRRIFDRDIDIRKATIAEVMVTDPITIAQGHLAAEALQIMETRKIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            LMV DD  K +G  +  DLLR G++
Sbjct: 297 GLMVCDDAGKPLGAFNMQDLLRAGVV 322


>gi|121534986|ref|ZP_01666804.1| KpsF/GutQ family protein [Thermosinus carboxydivorans Nor1]
 gi|121306399|gb|EAX47323.1| KpsF/GutQ family protein [Thermosinus carboxydivorans Nor1]
          Length = 322

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 201/325 (61%), Gaps = 10/325 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A + + AE   + SL   + GE    F  AV  I A KGRV++TG+GKSG IG K+
Sbjct: 2   IIDQARQVLEAEAEAIRSLIPRINGE----FTQAVNMILACKGRVIVTGMGKSGLIGKKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TLASTGTP+FF+H AE  HGDLGM+T +D+++ +S SG ++E+ +IL   +R    +I
Sbjct: 58  AATLASTGTPAFFLHPAEGVHGDLGMVTSEDIVLAISNSGETNEIISILPSIKRIGARII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T    S +  ++D+VL +  E E+CP GLAPT S    LA+GDALA+ALL  R F+  
Sbjct: 118 AMTGRPASTLGKNSDLVLDVAVEKEACPLGLAPTASTTATLAMGDALAVALLSERKFTPE 177

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG    +   +VMHSGD  P+V     + +A+ +++ K  G  +VVD   
Sbjct: 178 DFALFHPGGSLGRKLLLTVENVMHSGDDNPVVTPDKTVKEALFVITAKGLGATSVVDADG 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISV 316
           +L GIIT+GDI R   K  D     V  +M + P+ I +D L   A+ ++ ++    I+V
Sbjct: 238 RLLGIITDGDIRRGLEKGHDFLDKPVTALMTRTPRTITKDKLAAQALNMMEKNKPRPITV 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L VVD+  +AIG++H  DLLR G++
Sbjct: 298 LPVVDEQYRAIGMIHLTDLLRQGVV 322


>gi|225848092|ref|YP_002728255.1| sugar isomerase, KpsF/GutQ family [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644282|gb|ACN99332.1| sugar isomerase, KpsF/GutQ family [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 318

 Score =  362 bits (930), Expect = 4e-98,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 205/325 (63%), Gaps = 9/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +    ++I  E R L+ L+  L       F  AV+ I   +G+V+ITG+GKSG I
Sbjct: 1   MDVQIIDLGKQTIEEEIRALNRLKECL----DESFEKAVKLILEAQGKVIITGMGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+T++STGTP+FF+H AEA HGDLGM+ + DLII +S SG + EL AI+   +R+ 
Sbjct: 57  GKKIAATMSSTGTPAFFLHPAEALHGDLGMVEKKDLIIAISNSGETPELLAIIPILKRWG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IAIT++  S +  +AD+ L L  + E+CP  LAPT+S+   L +GDALA+ALL  RN
Sbjct: 117 NKIIAITNKRDSSLTKYADVSLYLNVDKEACPLNLAPTSSSTATLVLGDALAVALLRLRN 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  +F + HPGG LG   +  +D+M     +P+V    PL +A+ ++SEK  G   V+D
Sbjct: 177 FTPENFAMFHPGGSLGKKLMKVADIMRK--DLPIVCEDTPLKEAVIVMSEKGLGSTLVLD 234

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   L GIIT+GD+ R  +K   ++    +D M KNPK    D L+  A++L+ +HNI+V
Sbjct: 235 KDNNLTGIITDGDLRRFINKGKSIDNSLSKDAMTKNPKTASPDWLVLQALELMERHNITV 294

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L VV + +K +GI+H  D+L+ G+I
Sbjct: 295 LPVV-EDKKPVGIIHIHDILKSGVI 318


>gi|86751637|ref|YP_488133.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2]
 gi|86574665|gb|ABD09222.1| KpsF/GutQ family protein [Rhodopseudomonas palustris HaA2]
          Length = 336

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 170/332 (51%), Positives = 232/332 (69%), Gaps = 1/332 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K  T K       + +  ALR++ AE  G+++L ++L+ +L   F  A+E I+  KGR++
Sbjct: 5   KPRTTKPAMTDSAAAIPSALRTLEAEADGVTALAAALRSDLGSAFAAAIETIRNAKGRLI 64

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ITG+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SWSG   E+K
Sbjct: 65  ITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMK 124

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++ YA+RF I LIA+TS++ S +A  ADI LTLPK  E+CPH LAPTTS++M LA+GDA
Sbjct: 125 NLISYAKRFRIALIAMTSDSGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLALGDA 184

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           +AIALLESR F+  DF VLHPGGKLG +   A D+MH+GD++PL  +G  + DA+  +S 
Sbjct: 185 IAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGDAVPLKPLGTKMSDALVEMSA 244

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K FGCV +VD    + GI+T+GD+ R+   DL T +V++VM K PK I    L    ++L
Sbjct: 245 KGFGCVGIVDASGAVAGIVTDGDLRRHMRPDLMTATVDEVMTKRPKTISPGLLAGETLEL 304

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L    I+ L+V  +  K +GIVH  DLLR G+
Sbjct: 305 LNSSKITALLVT-EGNKPVGIVHLHDLLRAGV 335


>gi|188578109|ref|YP_001915038.1| arabinose 5-phosphate isomerase [Xanthomonas oryzae pv. oryzae
           PXO99A]
 gi|188522561|gb|ACD60506.1| arabinose 5-phosphate isomerase [Xanthomonas oryzae pv. oryzae
           PXO99A]
          Length = 333

 Score =  362 bits (929), Expect = 5e-98,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 205/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              S   S T    SL     V    R +  E+  L+++ + +  E    F  A   + A
Sbjct: 1   MAVSRLPSATVSDASL-----VASGQRVLEIEREALANVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD  ++L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNDERLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|289667909|ref|ZP_06488984.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. musacearum NCPPB4381]
          Length = 333

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 204/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIEREALASVGARIGSD----FSAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATFASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRASSTLANAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|289664526|ref|ZP_06486107.1| polysialic acid capsule expression protein [Xanthomonas campestris
           pv. vasculorum NCPPB702]
          Length = 333

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 204/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    SL     V    R +  E+  L+S+ + +  +    F  A   + A
Sbjct: 1   MAVSHLPSATVSDASL-----VASGQRVLEIERDALASVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATFASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRASSTLANAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+GD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|190893387|ref|YP_001979929.1| arabinose 5-phosphate isomerase (involved in capsule formation)
           [Rhizobium etli CIAT 652]
 gi|190698666|gb|ACE92751.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli CIAT 652]
          Length = 331

 Score =  362 bits (929), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 182/330 (55%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+VVDD ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVVDDDRRPLGLVHFHDLLRIGV 330


>gi|22138774|emb|CAD43107.1| hypothetical protein [Pseudomonas stutzeri]
          Length = 324

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 193/325 (59%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +  A R+I  E   +  L       +   F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSQLIATAQRTIRLEIEAVEQL----NARIDASFVQACELILACKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT +FFVH AEASHGD+GMIT DD+++ LS SG++ E+  +L   +R  I
Sbjct: 60  RKIAATLASTGTAAFFVHPAEASHGDMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    SV+A  A + L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 TLISMTGSPSSVLAKAAAVNLDASVAIEACPLNLAPTSSTTASLVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +    VMH+G+ +P V  G  L DA+  +++K  G   +V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVEHVMHTGERLPRVPRGTSLRDALLEMTQKGLGMTVIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L GI T+GD+ R   K  D+    +++VM  + K    + L   A++++  H IS 
Sbjct: 240 TDGRLAGIFTDGDLRRALDKGVDVRQTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISS 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+D+ +  IG ++  DLLR G++
Sbjct: 300 LVVIDEQELPIGALNMHDLLRAGVM 324


>gi|325919987|ref|ZP_08181969.1| KpsF/GutQ family protein [Xanthomonas gardneri ATCC 19865]
 gi|325549530|gb|EGD20402.1| KpsF/GutQ family protein [Xanthomonas gardneri ATCC 19865]
          Length = 333

 Score =  361 bits (928), Expect = 6e-98,   Method: Composition-based stats.
 Identities = 141/342 (41%), Positives = 204/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  + T    SL     V    R +  E++ L+ + + +  +    F  A   + A
Sbjct: 1   MAVSHLPTATVSDASL-----VASGQRVLEIERKALAGVGARIGSD----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGHI  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHIARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R    +IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNSIIAMTGRPASSLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMHSGD +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHSGDDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDNEGRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD  Q+A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQQRAVGALNIHDLLRAKVV 333


>gi|114321374|ref|YP_743057.1| KpsF/GutQ family protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227768|gb|ABI57567.1| KpsF/GutQ family protein [Alkalilimnicola ehrlichii MLHE-1]
          Length = 341

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 137/332 (41%), Positives = 194/332 (58%), Gaps = 7/332 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           + G               +  E   + +L   +       F  A   + A +GRVV+TG+
Sbjct: 14  QPGEPASDERFRALGQAVLELEADAVRTLTERVDAT----FVRACRHMLACRGRVVVTGM 69

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHI  K+A+TLASTGTP+FFVH  EASHGDLGMITRDD+++ LS SG ++E+  IL 
Sbjct: 70  GKSGHIAGKIAATLASTGTPAFFVHPGEASHGDLGMITRDDVVLALSNSGETNEITTILP 129

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
             RR  +PLIA+T    S +A  AD  L +    E+CP GLAPT S    LA+GDALAIA
Sbjct: 130 LIRRLHVPLIALTGNPDSTLARAADDHLDVSVAQEACPLGLAPTASTTASLAMGDALAIA 189

Query: 193 LLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           LLE+R F+ +DF   HP G     L +   DVMH+G  IP V    PL +A+  ++ K  
Sbjct: 190 LLEARGFTADDFARSHPGGRLGRRLLLLVEDVMHTGTRIPRVGEDTPLAEALLEITRKGL 249

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           G  A+VD   ++ G+ T+GD+ R   +  D++ L V +VM +  + +  D L   A++L+
Sbjct: 250 GMTAIVDGDDRILGVFTDGDLRRCLDQGLDIHRLRVGEVMTRGGRTVRPDALAAEALELM 309

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             H I+ L+V DD Q+ +G ++  DLLR G++
Sbjct: 310 ESHRINALLVTDDGQRLLGALNMHDLLRAGVV 341


>gi|289207550|ref|YP_003459616.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
 gi|288943181|gb|ADC70880.1| KpsF/GutQ family protein [Thioalkalivibrio sp. K90mix]
          Length = 325

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 141/328 (42%), Positives = 196/328 (59%), Gaps = 7/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +   ++T + AL  +  E   +  L   +       F  A   I   +GRVV+TG+GKS
Sbjct: 1   MNFNPDTTRKLALAVLNDEAEAVRRLADRV----DDAFLEACRHILECRGRVVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIGSKLA+TLASTGTP+FFVH  EASHGDLGMITRDD++I LS SG +DEL  IL   R
Sbjct: 57  GHIGSKLAATLASTGTPAFFVHPGEASHGDLGMITRDDVVIALSNSGETDELLTILPLIR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  +PLIA+T    S +   A + L +  E E+CP GLAPT+S    LA+ DALA+A+L+
Sbjct: 117 RLDVPLIALTGNPGSRLGQDATVHLDVSVEREACPLGLAPTSSTTAALAMSDALAVAVLD 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF   HPGG+LG    V  +D+MH+GD+IP V    PL DA+  ++ K  G V
Sbjct: 177 ARGFTADDFARSHPGGRLGRRLLVHVADIMHTGDAIPRVGPEAPLKDALFEITRKGLGLV 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V D    + G+ T+GD+ R   +   L  L++  VM +         L   A++ +   
Sbjct: 237 IVADPEAHILGVFTDGDLRRTLDRGESLEALTIGQVMTRGGHAARPQWLAVEALETMESK 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            I+ L VVDD Q+ +G+++  DLLR G+
Sbjct: 297 RINALPVVDDDQRLVGVLNMHDLLRAGV 324


>gi|207727854|ref|YP_002256248.1| sugar isomerase (sis) protein [Ralstonia solanacearum MolK2]
 gi|207742259|ref|YP_002258651.1| sugar isomerase (sis) protein [Ralstonia solanacearum IPO1609]
 gi|206591095|emb|CAQ56707.1| sugar isomerase (sis) protein [Ralstonia solanacearum MolK2]
 gi|206593647|emb|CAQ60574.1| sugar isomerase (sis) protein [Ralstonia solanacearum IPO1609]
          Length = 369

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 139/328 (42%), Positives = 195/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+S    ++S  F  AVE +    GRVV++GIGKSG
Sbjct: 46  NFNPDRALALAQQTFDIEAQAVLGLKS----QVSADFARAVEMVLRCTGRVVVSGIGKSG 101

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL AIL   +R
Sbjct: 102 HIARKVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLIKR 161

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +A HAD+VL    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 162 LGAKLIAVTGNPQSSLAQHADVVLNSRVEVEACPLNLAPTASTTAQMALGDALAVALLDA 221

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F  +DF   HPGG LG        DVM  G+++P V    PL  A+  ++ K     A
Sbjct: 222 RGFGADDFARSHPGGSLGRKLLTHVRDVMRQGEAVPRVTEDTPLSQALMEITRKGMAMTA 281

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +  G+ T+GD+ R     +D   + + +VM +NP+ +  D L   A++++  H 
Sbjct: 282 VVDAEGRAAGVFTDGDLRRLLETPRDWRAVPIHEVMHRNPRAVGPDQLAVEAVEMMETHR 341

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD   + IG +H  DL R  +I
Sbjct: 342 INQLLVVDAAGQLIGALHIHDLTRAKVI 369


>gi|170723419|ref|YP_001751107.1| KpsF/GutQ family protein [Pseudomonas putida W619]
 gi|169761422|gb|ACA74738.1| KpsF/GutQ family protein [Pseudomonas putida W619]
          Length = 324

 Score =  361 bits (928), Expect = 7e-98,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 198/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   +  L +S+       F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTLRLEIEAVQGLTASI----DANFVKACELILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITR D+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRGDIILALSNSGSTAEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 ELISMTGNPDSPLAQAAEVNLDARVAHEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+G  +P V+ G  L DA+  +S K  G   V +
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGTELPQVQRGTLLKDALLEMSRKGLGMTVVAE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  H IS 
Sbjct: 240 ADGKLAGIFTDGDLRRSLDRNIDVHTTLIDQVMTVHGKTARAEMLAAEALKIMEDHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G ++  DLLR G++
Sbjct: 300 LVVVDKDDRPVGALNMHDLLRAGVM 324


>gi|134096259|ref|YP_001101334.1| D-arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans]
 gi|133740162|emb|CAL63213.1| Arabinose 5-phosphate isomerase [Herminiimonas arsenicoxydans]
          Length = 342

 Score =  361 bits (928), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 143/342 (41%), Positives = 196/342 (57%), Gaps = 3/342 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
               H K       +      +Q A  ++  E   + +L+  +  E   QF  AV  +  
Sbjct: 1   MSVPHAKKPPATFDAKSATRALQFARDTLQIEADAILALKQRISNESGEQFIQAVALLLN 60

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GRVV++GIGKSGHI  K+ASTLASTGTP+ FVHAAEASHGDLGMIT DD +I +S+SG
Sbjct: 61  CTGRVVVSGIGKSGHIARKIASTLASTGTPALFVHAAEASHGDLGMITADDALIAISYSG 120

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL AI+   +R    LI IT  + S +A  AD+ L +  + E+CP  LAPT S    
Sbjct: 121 EAGELVAIVPIIKRMGATLITITGNDDSTLAQLADVHLNVRVDKEACPLNLAPTASTTAT 180

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LAIGDALA+ALL++R F E DF   HPGG LG        DVM +GD+IP V     L  
Sbjct: 181 LAIGDALAVALLDARGFGEEDFARSHPGGALGRRLLTHVRDVMRTGDAIPTVGKDASLYT 240

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILED 299
           A+  +S K     AVVD G +  G+ T+GD+ R     +D +TLS+ +VM  NP+ +  D
Sbjct: 241 ALLEISRKGMAMTAVVDAGGRAIGVFTDGDLRRLIENQRDFSTLSIAEVMHANPRSVQPD 300

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A++++ +  I+ L+V +   K +G +H  DL R  +I
Sbjct: 301 QLAVDAVKMMEEFRINQLLVTNADGKLVGALHIHDLTRAKVI 342


>gi|51597813|ref|YP_072004.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           32953]
 gi|153948490|ref|YP_001399439.1| D-arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           31758]
 gi|153997352|ref|ZP_02022452.1| arabinose 5-phosphate isomerase [Yersinia pestis CA88-4125]
 gi|165928116|ref|ZP_02223948.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165937422|ref|ZP_02225985.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|166011373|ref|ZP_02232271.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166211854|ref|ZP_02237889.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|167400660|ref|ZP_02306169.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167420789|ref|ZP_02312542.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167426740|ref|ZP_02318493.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|167470179|ref|ZP_02334883.1| D-arabinose 5-phosphate isomerase [Yersinia pestis FV-1]
 gi|218930589|ref|YP_002348464.1| D-arabinose 5-phosphate isomerase [Yersinia pestis CO92]
 gi|229836867|ref|ZP_04457032.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides A]
 gi|229839233|ref|ZP_04459392.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229899798|ref|ZP_04514939.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229904113|ref|ZP_04519224.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|270488548|ref|ZP_06205622.1| arabinose 5-phosphate isomerase [Yersinia pestis KIM D27]
 gi|294505301|ref|YP_003569363.1| hypothetical protein YPZ3_3192 [Yersinia pestis Z176003]
 gi|37079460|sp|Q8D1Q8|KDSD_YERPE RecName: Full=Arabinose 5-phosphate isomerase
 gi|51591095|emb|CAH22759.1| Conserved hypothetical protein [Yersinia pseudotuberculosis IP
           32953]
 gi|115349200|emb|CAL22165.1| conserved hypothetical protein [Yersinia pestis CO92]
 gi|149288989|gb|EDM39069.1| arabinose 5-phosphate isomerase [Yersinia pestis CA88-4125]
 gi|152959985|gb|ABS47446.1| arabinose 5-phosphate isomerase [Yersinia pseudotuberculosis IP
           31758]
 gi|165914527|gb|EDR33141.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. IP275]
 gi|165919890|gb|EDR37191.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. F1991016]
 gi|165989757|gb|EDR42058.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. E1979001]
 gi|166206600|gb|EDR51080.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. B42003004]
 gi|166961595|gb|EDR57616.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Orientalis
           str. MG05-1020]
 gi|167050028|gb|EDR61436.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Antiqua
           str. UG05-0454]
 gi|167054267|gb|EDR64088.1| arabinose 5-phosphate isomerase [Yersinia pestis biovar Mediaevalis
           str. K1973002]
 gi|229678231|gb|EEO74336.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Nepal516]
 gi|229687290|gb|EEO79365.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229695599|gb|EEO85646.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229705810|gb|EEO91819.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Pestoides A]
 gi|262363364|gb|ACY60085.1| hypothetical protein YPD4_3181 [Yersinia pestis D106004]
 gi|262367258|gb|ACY63815.1| hypothetical protein YPD8_3145 [Yersinia pestis D182038]
 gi|270337052|gb|EFA47829.1| arabinose 5-phosphate isomerase [Yersinia pestis KIM D27]
 gi|294355760|gb|ADE66101.1| hypothetical protein YPZ3_3192 [Yersinia pestis Z176003]
 gi|320017119|gb|ADW00691.1| D-arabinose 5-phosphate isomerase [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 328

 Score =  361 bits (927), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKQVLQIEREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI +
Sbjct: 70  TFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +S  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 SSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++
Sbjct: 190 ALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D
Sbjct: 250 KGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|70728302|ref|YP_258051.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf-5]
 gi|68342601|gb|AAY90207.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf-5]
          Length = 324

 Score =  361 bits (927), Expect = 8e-98,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E + +  L   +  +    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLELQAVEGLLPHIDAD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT +FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T   +S +A  AD+ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 QLISLTGNPESPLAKAADVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH G  +P V+ G  L DA+  ++ K  G   +++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHEGSDLPQVQRGTLLKDALMEMTRKGLGMTVILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L GI T+GD+ R   +  D++  +++ VM  + K    D L   A++++  H IS 
Sbjct: 240 ADGRLAGIFTDGDLRRTLDRAIDIHHATIDSVMTPHGKTARADMLAAEALKIMEDHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + IG ++  DLLR G++
Sbjct: 300 LVVVDKEDRPIGALNMHDLLRAGVM 324


>gi|330721730|gb|EGG99725.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC2047]
          Length = 326

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 145/326 (44%), Positives = 207/326 (63%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
              + +    R+I  E + + +L       +  QF  A + + A +GR+V+TG+GKSGHI
Sbjct: 5   DPKALIATGQRTIKLEAKCVEALA----PRIDEQFSSACQLMLACEGRIVVTGMGKSGHI 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSK+A+TLASTG+P+FFVH  EASHGDLGMIT  D++I LS SG++ E+  IL   +R  
Sbjct: 61  GSKIAATLASTGSPAFFVHPGEASHGDLGMITHKDVVIALSNSGTTAEILTILPLIKRMH 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            PLI++T    S +A +ADI L +    E+CPHGLAPT+S    LA+GDALAIA+LE+R 
Sbjct: 121 APLISMTGAPASTLAKNADIHLDVSVAEEACPHGLAPTSSTTAALAMGDALAIAMLEARG 180

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS  DF + HPGG LG    +   D+MHSG+ IPLVK   PL  A+ +++EK+ G  AV+
Sbjct: 181 FSAEDFAISHPGGALGRRLLLKVEDIMHSGEQIPLVKQDTPLSQALLVVTEKKLGMTAVI 240

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+  +L+GI T+GD+ R      D+ +  V +VM  + K I  D L   A+ ++ +  I+
Sbjct: 241 DDDNRLQGIFTDGDLRRTLDNGIDIRSALVNEVMTAHCKTIRPDVLAAEALAVMEEDKIN 300

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V DD  + IG ++  DLLR G+I
Sbjct: 301 ALIVTDDHNRPIGALNMHDLLRAGVI 326


>gi|119477364|ref|ZP_01617555.1| hypothetical protein GP2143_00282 [marine gamma proteobacterium
           HTCC2143]
 gi|119449290|gb|EAW30529.1| hypothetical protein GP2143_00282 [marine gamma proteobacterium
           HTCC2143]
          Length = 325

 Score =  361 bits (927), Expect = 9e-98,   Method: Composition-based stats.
 Identities = 136/328 (41%), Positives = 194/328 (59%), Gaps = 7/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             + K S    ALR+I  E+  ++ L   +       F  A E I A  GRVV+TG+GKS
Sbjct: 1   MPMSKLSLKDSALRTITMERDAITELLDRI----DANFEHACELILACSGRVVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTP+ FVH  EASHGDLGMIT DD++I LS SG++ E+  IL   +
Sbjct: 57  GHIGTKIAATLASTGTPAMFVHPGEASHGDLGMITPDDVVIALSNSGNTTEVLTILPLLK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R   PLI++T    S ++  AD  + +    E+C   LAPT+S    L +GDALAI+L+E
Sbjct: 117 RMGTPLISMTGNPASTLSSAADANIDVTVSQEACSLDLAPTSSTTATLVMGDALAISLME 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           ++ FS  DF   HPGG LG    +   DVMHSG  +P+V +G  L +A+  ++ K  G  
Sbjct: 177 AKGFSAEDFAFSHPGGALGRRLLLKVEDVMHSGPLLPVVFVGTKLSEALMEITRKGLGMT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            +VD    L G+ T+GD+ R   +  D++  ++ D+M ++ K +  D L   A+ ++   
Sbjct: 237 TIVDNNNTLVGVFTDGDLRRALDQNIDIHQTAISDIMTRDCKTVNADMLAAEALGIMDHG 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            IS L VVD+  K +G VH  DLL  G+
Sbjct: 297 KISALAVVDEANKPVGAVHLHDLLNAGV 324


>gi|83647978|ref|YP_436413.1| sugar phosphate isomerase [Hahella chejuensis KCTC 2396]
 gi|83636021|gb|ABC31988.1| predicted sugar phosphate isomerase involved in capsule formation
           [Hahella chejuensis KCTC 2396]
          Length = 325

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 136/329 (41%), Positives = 209/329 (63%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            S   +  ++ A R+I  E + + +L S +       F  A + +   KGRVV+TG+GKS
Sbjct: 1   MSHHDHEYIKAARRTIEMEVQAVQALSSRI----DDAFIKACDLMLNCKGRVVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTPSFF+H  EASHGDLGM+T +D+++ +S SG++ E+  IL   +
Sbjct: 57  GHIGNKIAATLASTGTPSFFLHPGEASHGDLGMVTPNDVVLAISNSGNTAEIVTILPLLK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  +PL+++T +  S ++  A+  +      E+CP GLAPT+S  + L +GDALAIALLE
Sbjct: 117 RMGVPLVSMTGKPDSTLSQIAEANIDASVATEACPLGLAPTSSTTVCLVLGDALAIALLE 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF   HPGG LG    +  SD+MHSGD++P+V+ G  L +++  +S+K  G  
Sbjct: 177 ARGFTAEDFAFSHPGGALGRRLLLKISDIMHSGDAVPVVRSGASLSESLLQMSQKGLGMT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            +VDE  KL G+ T+GD+ R   K  D+ + +++ VM  + K + +D L   A+ L+++ 
Sbjct: 237 CIVDEDDKLLGVFTDGDLRRTLDKNIDIRSCAIDVVMTTHCKSVTKDMLAAEALGLMQEK 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L VVD  +K IG  +  D+LR G+I
Sbjct: 297 KINALPVVDADKKVIGAFNTQDMLRAGVI 325


>gi|312114077|ref|YP_004011673.1| KpsF/GutQ family protein [Rhodomicrobium vannielii ATCC 17100]
 gi|311219206|gb|ADP70574.1| KpsF/GutQ family protein [Rhodomicrobium vannielii ATCC 17100]
          Length = 345

 Score =  361 bits (927), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 160/319 (50%), Positives = 212/319 (66%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S    A R++     GL +L +SL   L+  F  AV  I A +GRV++TG+GKSGH+G K
Sbjct: 27  SAAAVARRTLECSLDGLLALRASLANGLALDFERAVALIHACRGRVIVTGMGKSGHVGQK 86

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ FVH AEASHGDLGMIT  D ++ LSWSG + EL +IL Y+RRF +PL
Sbjct: 87  IAATLASTGTPAQFVHPAEASHGDLGMITAADTVLALSWSGETVELASILTYSRRFRVPL 146

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS  +S +   AD+VL LP   E+CPHGLAPTTS + QLA+GD LAIALLE R F+ 
Sbjct: 147 IALTSRRESALGKAADVVLQLPPVKEACPHGLAPTTSTLTQLALGDCLAIALLEGRGFTA 206

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGG+LG      +D+MH G+ +PL     P+  A+  ++EK FGC+ VVD   
Sbjct: 207 SDFKVFHPGGQLGANLKHVADIMHKGERMPLAGADAPMSAALVTMTEKAFGCLGVVDAEG 266

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T+GD+ R+   DL      D+M  NPK I    L + A+Q++ +  I+ L VVD
Sbjct: 267 RLAGIVTDGDLRRHMAGDLLGRRAADIMTCNPKTITPTMLASAALQIVNEKKITALFVVD 326

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D    +GIVH  DLLR G+
Sbjct: 327 D-GVPVGIVHIHDLLRVGV 344


>gi|115522722|ref|YP_779633.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisA53]
 gi|115516669|gb|ABJ04653.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisA53]
          Length = 337

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 162/332 (48%), Positives = 228/332 (68%), Gaps = 1/332 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
               +   S   N  +  ALR++ AE  G+++L ++L+ +L+  F  AV+ I   KGR++
Sbjct: 6   PRTAKPYMSDQANDAIPSALRTLEAEAEGVTALAAALKSDLAGAFLAAVDTIAKAKGRLI 65

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TG+GKSGHIG K+A+T ASTGTP+FFVHAAEASHGDLGMIT +D+I+ LSWSG   E+K
Sbjct: 66  VTGLGKSGHIGRKIAATFASTGTPAFFVHAAEASHGDLGMITGEDVILALSWSGEQPEMK 125

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++ YA+RF IPLIA+T++  S +   A + L LPK  E+CPH LAPTTS++M LA+GDA
Sbjct: 126 NLITYAKRFRIPLIAMTADANSTLGQAAAVSLALPKAREACPHNLAPTTSSVMLLALGDA 185

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LAIALLE R F+  DF VLHPGGKLG +   A D+MH GD++PL  +G  + DA+  +S 
Sbjct: 186 LAIALLEGRGFTSTDFSVLHPGGKLGAMLKHARDLMHKGDAVPLKPLGTKMSDALVEMSS 245

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K FGCV ++D   ++ GI+T+GD+ R+   DL T  V++VM ++PK I    L + A+++
Sbjct: 246 KGFGCVGIIDGRGQIVGIVTDGDLRRHMRADLMTALVDEVMTRDPKTISPGLLASEALEM 305

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L    I+  +V  +  K +GIVH  DLLR G+
Sbjct: 306 LNSAKITAFLVT-EANKPVGIVHLHDLLRAGV 336


>gi|167561504|ref|ZP_02354420.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis EO147]
          Length = 327

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 192/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALADQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISHSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDAL +A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALTVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM +G  +P V +   L DA+  ++ KR G  AVVDE
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRTGGEVPTVTLDSTLSDALFQITAKRMGMTAVVDE 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM +NP+ I  D L   A++L+ +H I+ +
Sbjct: 244 AGRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDEQGALIGALNMHDLFSKKVI 327


>gi|260431735|ref|ZP_05785706.1| arabinose 5-phosphate isomerase [Silicibacter lacuscaerulensis
           ITI-1157]
 gi|260415563|gb|EEX08822.1| arabinose 5-phosphate isomerase [Silicibacter lacuscaerulensis
           ITI-1157]
          Length = 322

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 198/324 (61%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
              S ++ A + +  E R L  L   L       F  AV  I   KGR++++GIGKSGHI
Sbjct: 3   DTESFLKTARQVVTDEARALEVLAEGLDER----FADAVRLILQAKGRLIVSGIGKSGHI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP++FVH AEASHGDLGM+++DD+++ +S SG + EL  +L + RRF 
Sbjct: 59  GHKIAATLASTGTPAYFVHPAEASHGDLGMVSKDDVVLAISNSGEAPELANLLAFTRRFG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ++S   S +   AD+ L +P   E+C +G+ P+ S  + LA+GDALAIAL++ R+
Sbjct: 119 IPLIGLSSRPDSTLMKQADVHLLIPALGEACGYGMVPSISTTLTLAMGDALAIALMKYRD 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGGKLG       D+MHSG+++PLV    P+ DA+  +S+K FG V V D
Sbjct: 179 FKPEDFRAFHPGGKLGAQLSAVRDLMHSGNALPLVSADTPMSDALIEISQKGFGVVGVTD 238

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GIIT+GD+ R+    LN  +  +VM  NP  I  D L   A+ ++    I+ L 
Sbjct: 239 ANGALVGIITDGDLRRHMDGLLNN-TAAEVMTANPTTIAPDALAEEAVAIMNARKITSLF 297

Query: 319 VVDDC--QKAIGIVHFLDLLRFGI 340
           VVD     +A G++H  D LR G+
Sbjct: 298 VVDPDQPGRAQGLLHIHDCLRVGL 321


>gi|126668780|ref|ZP_01739728.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
 gi|126626763|gb|EAZ97412.1| hypothetical protein MELB17_07244 [Marinobacter sp. ELB17]
          Length = 326

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 139/326 (42%), Positives = 201/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +     + AL +I  E+  ++SLE  +       F  A + I A +GRVV+TG+GKSGHI
Sbjct: 5   VPKDFRESALNTIRIERDAITSLEQRI----GESFTSACQTIMACRGRVVVTGMGKSGHI 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTP+FFVH  EASHGDLGMIT  D++I +S SG+++E+  +L   +R  
Sbjct: 61  GNKIAATLASTGTPAFFVHPGEASHGDLGMITSQDVVIAISNSGNTNEVVTLLPLLKRMG 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            PLI++T + +S++A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R 
Sbjct: 121 TPLISMTGDPQSLLAQEALANLDVSVLKEACPLGLAPTSSTTATLVMGDALAVALLEARG 180

Query: 199 FSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS  DF   HP G     L +   D+MHSG S+P+V  G  L  A+  +S K  G   VV
Sbjct: 181 FSAEDFAFSHPGGRLGRRLLLRVLDIMHSGHSVPIVSEGTTLSGALLEISRKGLGMTTVV 240

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    L G+ T+GD+ R+  K  D++T ++E +M +N K I  D L   A+ ++ +  IS
Sbjct: 241 DSNGALIGVFTDGDLRRSLDKNVDVHTTAIEQLMTRNGKTIRADQLAVEALNIMEEMKIS 300

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VV +  + +G ++  DLLR G+I
Sbjct: 301 ALPVVGEHGELVGALNMHDLLRAGVI 326


>gi|56459512|ref|YP_154793.1| sugar phosphate isomerase [Idiomarina loihiensis L2TR]
 gi|56178522|gb|AAV81244.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina loihiensis L2TR]
          Length = 325

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 126/316 (39%), Positives = 194/316 (61%), Gaps = 7/316 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +  EK+ +  L   L       F  A + +   KGRV++TG+GKSGHIG K+A+TLAS
Sbjct: 14  QVLDIEKKAIEGLYQYL----DDNFDAACQTLFNCKGRVIVTGMGKSGHIGGKIAATLAS 69

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGDLGM+   D++I +S SG + E+  I+   +R  +PLI++T + 
Sbjct: 70  TGTPAFFVHPGEASHGDLGMVAAQDVVIAISNSGETAEVLNIIPVIKRLGVPLISMTGKP 129

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  AD  + +  E E+CP GLAPT S    L +GDA+A+ALL +R F+ +DF + H
Sbjct: 130 GSTLARLADTHVCIAVEQEACPLGLAPTASTTATLVMGDAMAVALLNARGFTADDFALSH 189

Query: 209 PGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG  L +   DVMH+G+ +P++     + DA+  +S K  G  A+VDE Q+L GI 
Sbjct: 190 PGGSLGKRLLLRLHDVMHTGERVPVIPADAIISDALLEMSRKGLGMTAIVDENQRLAGIF 249

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R      D++   + +VM ++     ED L   A++L++   I+ L++ +D  +
Sbjct: 250 TDGDLRRILDNRIDVHKTPIAEVMTRSCITANEDMLAAEALKLMQDRKINGLIITNDDGQ 309

Query: 326 AIGIVHFLDLLRFGII 341
             G ++  DLL+ G++
Sbjct: 310 PCGAMNMHDLLQAGVL 325


>gi|21243694|ref|NP_643276.1| polysialic acid capsule expression protein [Xanthomonas axonopodis
           pv. citri str. 306]
 gi|21109275|gb|AAM37812.1| polysialic acid capsule expression protein [Xanthomonas axonopodis
           pv. citri str. 306]
          Length = 333

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 139/342 (40%), Positives = 202/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  S T    +L     V    R +  E+  L+S+ + +  E    F  A   +  
Sbjct: 1   MAVSHLPSATVSDATL-----VASGQRVLEIEREALASVGARIGRE----FAAACRLVLT 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTSSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD    L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADGHLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|270159891|ref|ZP_06188547.1| arabinose 5-phosphate isomerase [Legionella longbeachae D-4968]
 gi|289165355|ref|YP_003455493.1| arabinose 5-phosphate isomerase [Legionella longbeachae NSW150]
 gi|269988230|gb|EEZ94485.1| arabinose 5-phosphate isomerase [Legionella longbeachae D-4968]
 gi|288858528|emb|CBJ12409.1| putative arabinose 5-phosphate isomerase [Legionella longbeachae
           NSW150]
          Length = 320

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 132/314 (42%), Positives = 199/314 (63%), Gaps = 7/314 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E + +  L   +       F  A E + A KGR+V+TG+GKSGHI +K+A+TL+ST
Sbjct: 10  VIETEAQAVFELTQRIDNR----FEKACELLLACKGRIVVTGMGKSGHIANKIAATLSST 65

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G+PSFF+H  EASHGDLGMITR D +I +S SG++ EL  +L   +R  IPLI +T   +
Sbjct: 66  GSPSFFMHPGEASHGDLGMITRQDTVIAISHSGNTAELVTLLPLLKRLEIPLITLTGNPE 125

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  +D+ L +  + E+CP GLAPTTS  + L +GDALAIALL++R FSE DF + HP
Sbjct: 126 SALAKASDVNLDVGIKQEACPLGLAPTTSTTVALVMGDALAIALLQARGFSEEDFALSHP 185

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG  L +   ++ H G+ +PLV     + +A+  ++EK+ G   V+D    L GI T
Sbjct: 186 GGSLGKRLLLRIDELCHQGEQLPLVHENATVSEALIEVTEKKLGMTCVIDNKGYLTGIYT 245

Query: 269 EGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GDI R      D+NT  +++VM +N + I +  L   A+ ++++++I+ L+V+D+  + 
Sbjct: 246 DGDIRRTLTHQYDINTTPIKEVMTRNARTIYKGMLAAEALAMMQKYSITSLIVIDEETRP 305

Query: 327 IGIVHFLDLLRFGI 340
             ++H  DLL+ GI
Sbjct: 306 AAVIHLHDLLKAGI 319


>gi|206889216|ref|YP_002249743.1| arabinose 5-phosphate isomerase [Thermodesulfovibrio yellowstonii
           DSM 11347]
 gi|206741154|gb|ACI20211.1| arabinose 5-phosphate isomerase [Thermodesulfovibrio yellowstonii
           DSM 11347]
          Length = 322

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 204/325 (62%), Gaps = 8/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + ++ A + +  E   L +L+  +  +    F  AVE I   KGRVV+TGIGKSG IG 
Sbjct: 2   ENLIEIAQKVLTIEAESLQTLKERINED----FLKAVEIIHNSKGRVVVTGIGKSGLIGR 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H AEASHGDLGM+T +D++I +S SG +DEL  ++ + + F++ 
Sbjct: 58  KIAATLASTGTPSFFMHPAEASHGDLGMVTEEDVVIAISNSGETDELIRLIPFLKYFNVK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++AIT   +S +A  AD VL +  + E+CP G  PT S    LA+GDALA+AL+    F 
Sbjct: 118 IVAITGNTQSTLAKQADAVLDVSVKEEACPFGFIPTASTTATLAMGDALAVALIMRNGFK 177

Query: 201 ENDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + DF   HPGG LG        D+MH+GD +P+      ++DA+  +S KR G V VVDE
Sbjct: 178 KEDFAFFHPGGSLGRRMLTKVKDLMHTGDELPVCFPQTVMLDAVLEISSKRLGVVVVVDE 237

Query: 260 GQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            +++ GIIT+GD+ R    + KDL  L    +M  NPK I ED L  VA+ ++++++I+ 
Sbjct: 238 NKRILGIITDGDVRRGVQRYGKDLFDLKACQIMTINPKTINEDELAAVALSVMQKYSITS 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V +      G++H  D+L+ GI+
Sbjct: 298 LVVPNSDGTLEGLIHIHDILKKGIL 322


>gi|170729949|ref|YP_001775382.1| arabinose-5-phosphate isomerase [Xylella fastidiosa M12]
 gi|167964742|gb|ACA11752.1| Arabinose-5-phosphate isomerase [Xylella fastidiosa M12]
          Length = 345

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 136/327 (41%), Positives = 194/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 23  LSDTALIASARRVIEIEREALTLL----NERIGAPFVAACRLILNSHGRVISTGMGKSGH 78

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 79  IARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 138

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L +GDALA+ALL++R
Sbjct: 139 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVVGDALAVALLDAR 198

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSGD +P V     L +A+  ++ KR G  A+
Sbjct: 199 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMTAI 258

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 259 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 318

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 319 NGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|162418897|ref|YP_001605694.1| D-arabinose 5-phosphate isomerase [Yersinia pestis Angola]
 gi|162351712|gb|ABX85660.1| arabinose 5-phosphate isomerase [Yersinia pestis Angola]
          Length = 342

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 28  QAGKQVLQIEREGLAQLDQYINED----FSRACEAIFRCHGKVVVMGMGKSGHIGCKIAA 83

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGMIT  D+++ +S SG S+E+  ++   +R  I LI +
Sbjct: 84  TFASTGTPAFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILTLIPVLKRQKILLICM 143

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +S  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 144 SSNPESTMGKAADIHLCINVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 203

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+  ++
Sbjct: 204 ALSHPGGALGRKLLLRISDIMHTGTEIPTVSPDASLRDALLEITRKSLGLTVICDDSMRI 263

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM +    +  + L   A+ L+   +I+ L+V D
Sbjct: 264 KGIFTDGDLRRVFDMGIDLNNAKIADVMTRGGIRVPPNILAVDALNLMESRHITALLVAD 323

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 324 GDQ-LLGVVHMHDMLRAGVV 342


>gi|88811868|ref|ZP_01127121.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrococcus mobilis Nb-231]
 gi|88790752|gb|EAR21866.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrococcus mobilis Nb-231]
          Length = 337

 Score =  361 bits (926), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 185/320 (57%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     I  E   + +L   +       F  A   +   +GRVV+TG+GKSGHIG KLA+
Sbjct: 22  QLGRAVIEVEAASILALGQRI----GHDFARACRLLLDCRGRVVVTGMGKSGHIGGKLAA 77

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLGMIT  D +I LS SG + E+  +L   +R  +PLIA+
Sbjct: 78  TLASTGTPAFFVHPGEASHGDLGMITASDAVIALSNSGETREITILLPLIKRLDVPLIAL 137

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A + + +    E+CP GLAPT+S    LA+GDALA+ALL++R F+  DF
Sbjct: 138 TGNPGSTLARAASVHIDISVTEEACPLGLAPTSSTTATLAMGDALAVALLDARGFTREDF 197

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HPGG LG    +   D+MH G+ IP V     L  A+  ++ K  G   VVD   ++
Sbjct: 198 ARSHPGGSLGRRLLLRIEDIMHMGERIPRVAPETLLSHALVEMTNKGLGMTTVVDTEGRV 257

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R      D++   + +VM    + +   +L   A+QL+ +H I+ L+VVD
Sbjct: 258 LGIFTDGDLRRALDHQIDVHNTRMAEVMTPGGRTVQAHSLAAEALQLMEKHKINALLVVD 317

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              + IG ++  DLL+ G++
Sbjct: 318 SENRLIGALNMHDLLQAGVV 337


>gi|71274803|ref|ZP_00651091.1| KpsF/GutQ [Xylella fastidiosa Dixon]
 gi|71900943|ref|ZP_00683057.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
 gi|71164535|gb|EAO14249.1| KpsF/GutQ [Xylella fastidiosa Dixon]
 gi|71729302|gb|EAO31419.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
          Length = 345

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/327 (41%), Positives = 194/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 23  LSDTALIASARRVIEIEREALTLL----NERIGAPFVAACRLILNSHGRVISTGMGKSGH 78

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 79  IARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 138

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL++R
Sbjct: 139 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLDAR 198

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSGD +P V     L +A+  ++ KR G  A+
Sbjct: 199 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMTAI 258

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 259 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 318

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 319 NGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|182681230|ref|YP_001829390.1| KpsF/GutQ family protein [Xylella fastidiosa M23]
 gi|182631340|gb|ACB92116.1| KpsF/GutQ family protein [Xylella fastidiosa M23]
          Length = 345

 Score =  360 bits (925), Expect = 1e-97,   Method: Composition-based stats.
 Identities = 137/327 (41%), Positives = 194/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 23  LSDTALIASARRVIEIEREALTLL----NERIGAPFVAACRLILNSHGRVISTGMGKSGH 78

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 79  IARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 138

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL++R
Sbjct: 139 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLDAR 198

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSGD +P V     L +A+  ++ KR G  A+
Sbjct: 199 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMTAI 258

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 259 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 318

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 319 NGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|114705437|ref|ZP_01438345.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Fulvimarina pelagi HTCC2506]
 gi|114540222|gb|EAU43342.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Fulvimarina pelagi HTCC2506]
          Length = 334

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 170/321 (52%), Positives = 227/321 (70%), Gaps = 1/321 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++ +  ALR+I  E  GL +L  SL G+ +  F   + +I  ++GR+V+TG+GKSGHIG
Sbjct: 14  PSTAILSALRTIATEAEGLKALSESLVGDRANAFERTIARILEMRGRIVVTGVGKSGHIG 73

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+T ASTGTP+FFVHAAEA+HGDLGMI +DD+I+ LSWSG + ELK IL Y+RRF I
Sbjct: 74  TKMAATFASTGTPAFFVHAAEANHGDLGMIGQDDIILALSWSGETSELKGILDYSRRFGI 133

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+TS+  S +   AD +L LP+  E+CPHGLAPTTS  +Q+A+GDALA+ALLE R F
Sbjct: 134 TLIAMTSKPDSALGRSADEILQLPQATEACPHGLAPTTSTALQMALGDALAVALLEQRRF 193

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF + HPGGKLG   V   DVMHSGD +PLV     + +AI ++S K FGCVA+ DE
Sbjct: 194 TPQDFRIYHPGGKLGASLVKVGDVMHSGDEMPLVTSNTLMSEAILVMSRKSFGCVAITDE 253

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L GIIT+GD+ R+   DL   +V+DVM +NPK +  DTL   A++ +   NI+ LMV
Sbjct: 254 AGRLSGIITDGDLRRHISSDLLAKTVDDVMTRNPKTVEPDTLAMAALETINASNITSLMV 313

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V + Q  +GIVH  DLLR G+
Sbjct: 314 VREAQ-PVGIVHLHDLLRIGV 333


>gi|170740239|ref|YP_001768894.1| KpsF/GutQ family protein [Methylobacterium sp. 4-46]
 gi|168194513|gb|ACA16460.1| KpsF/GutQ family protein [Methylobacterium sp. 4-46]
          Length = 338

 Score =  360 bits (925), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 156/338 (46%), Positives = 215/338 (63%), Gaps = 1/338 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              +H         + +  +    A+R+I  E   L +L  +L GEL   F  AV  I A
Sbjct: 1   MERTHTAETAESSAAQIVEAGHFSAIRTIRTEAEALHTLARALDGELRAGFAEAVAAIHA 60

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GRV ++GIGKSGHI  K+A+TLASTGTP+ F+H +EASHGDLGMIT  D++I LSWSG
Sbjct: 61  SPGRVFVSGIGKSGHIARKIAATLASTGTPATFIHPSEASHGDLGMITAQDIVIALSWSG 120

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  I+ +A+RF++PLIA+TS  +S +   ADI+L LP   E+CPH LAPT+S++MQ
Sbjct: 121 ETAELGDIVSFAKRFTVPLIALTSNPQSTLGLAADILLPLPLVKEACPHNLAPTSSSVMQ 180

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALAIALLE R FS +DF V HPGGKL         +MH+ D +PLV  G P+ +A
Sbjct: 181 LALGDALAIALLERRGFSASDFKVFHPGGKLAARLKTVRQLMHTDDEMPLVPRGIPMSEA 240

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +  +  KRFGC  VVDE  +L GIIT GD+ R+   DL    V+ +M   P  +L   L 
Sbjct: 241 LLAIMGKRFGCAGVVDEAGRLVGIITNGDLRRHMGSDLLHRPVDAIMTPAPITVLPGGLA 300

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + A++++ +  I+ + VV +  + IGI+H  DLL+ G+
Sbjct: 301 SAALEMMNRRQITAMFVV-EGGRPIGILHIHDLLQVGV 337


>gi|293394220|ref|ZP_06638520.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291423198|gb|EFE96427.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 328

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 138/320 (43%), Positives = 197/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A E I A  G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLQIERDGLAQLDRYINDD----FTRACEAIAACGGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH AEASHGDLGM+T  D+++ +S SG S+E++A++   +R  IPLI +
Sbjct: 70  TFASTGTPSFFVHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQRIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPDSSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MHSG+ IP V     L DA+  ++ K  G   V ++  K+
Sbjct: 190 ALSHPGGALGRRLLLRVTDIMHSGEEIPHVSADASLRDALLEITRKNLGMTVVCNDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    DLN   + DVM      +  +TL   A+ L++Q +I+ L+V D
Sbjct: 250 AGIFTDGDLRRVFDMGIDLNHARIADVMTLGGVRVRPNTLAVDALNLMQQRHITALLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|227326635|ref|ZP_03830659.1| D-arabinose 5-phosphate isomerase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 363

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 136/336 (40%), Positives = 201/336 (59%), Gaps = 9/336 (2%)

Query: 10  SVTRKGHSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
              +K H L  +   Q A  + +  E+ GL+ L+  +       F  A +KI   +G+VV
Sbjct: 33  HTRQKAHELPADFDFQQAGKQVLSIERDGLAQLDQYI----DDNFTLACKKIFDCQGKVV 88

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ 
Sbjct: 89  VMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEIL 148

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L +GDA
Sbjct: 149 SLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGDA 208

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           LA+ALL++R F+  DF + HPGG LG    +  SD+MHSGD IP V     L DA+  ++
Sbjct: 209 LAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEIT 268

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K  G   + +   K++GI T+GD+ R F    DLN+  + DVM      +   TL   A
Sbjct: 269 RKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDA 328

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 329 LNLMQSRHITSVLVAEND-RLVGIVHMHDMLRAGVV 363


>gi|86359150|ref|YP_471042.1| polysialic acid capsule expression protein [Rhizobium etli CFN 42]
 gi|86283252|gb|ABC92315.1| polysialic acid capsule expression protein [Rhizobium etli CFN 42]
          Length = 331

 Score =  360 bits (924), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 181/330 (54%), Positives = 242/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++NS ++ A R+I  EK GL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAIKLVENSVLESAKRTIETEKHGLEALERAFDNGLAGPFTRAVEIIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGTKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIAIT    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIAITCSEASSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGEKLPLVVKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D   +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDPDGRLCGIVTEGDMARNLSRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+  + IG+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDEDSRPIGLVHFHDLLRIGV 330


>gi|146281422|ref|YP_001171575.1| sugar isomerase [Pseudomonas stutzeri A1501]
 gi|145569627|gb|ABP78733.1| sugar isomerase [Pseudomonas stutzeri A1501]
          Length = 318

 Score =  359 bits (923), Expect = 2e-97,   Method: Composition-based stats.
 Identities = 134/321 (41%), Positives = 192/321 (59%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R+I  E   +  L       +   F  A E I A KGRVV+ G+GKSGHIG K+A
Sbjct: 2   IATAQRTIRLEIEAVEQL----NARIDASFVQACELILACKGRVVVVGMGKSGHIGRKIA 57

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH AEASHGD+GMIT DD+++ LS SG++ E+  +L   +R  I LI+
Sbjct: 58  ATLASTGTAAFFVHPAEASHGDMGMITPDDVVLALSNSGTTSEIVTLLPLIKRLGITLIS 117

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    SV+A  A + L      E+CP  LAPT+S    L +GDALAIALLE+R F+  D
Sbjct: 118 MTGSPSSVLAKAAAVNLDASVAIEACPLNLAPTSSTTASLVLGDALAIALLEARGFTAED 177

Query: 204 FYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG    +    VMH+G+ +P V  G  L DA+  +++K  G   +V+   +
Sbjct: 178 FAFSHPGGALGRRLLLKVEHVMHTGERLPRVPRGTSLRDALLEMTQKGLGMTVIVETDGR 237

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D+    +++VM  + K    + L   A++++  H IS L+V+
Sbjct: 238 LAGIFTDGDLRRALDKGVDVRQTLIDEVMTVHGKTANAEMLAAEALKIMEDHKISSLVVI 297

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D+ +  IG ++  DLLR G++
Sbjct: 298 DEQELPIGALNMHDLLRAGVM 318


>gi|52841076|ref|YP_094875.1| polysialic acid capsule expression protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54293815|ref|YP_126230.1| hypothetical protein lpl0871 [Legionella pneumophila str. Lens]
 gi|54296861|ref|YP_123230.1| hypothetical protein lpp0902 [Legionella pneumophila str. Paris]
 gi|148360514|ref|YP_001251721.1| polysialic acid capsule expression protein [Legionella pneumophila
           str. Corby]
 gi|296106419|ref|YP_003618119.1| polysialic acid capsule expression protein [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628187|gb|AAU26928.1| polysialic acid capsule expression protein [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53750646|emb|CAH12053.1| hypothetical protein lpp0902 [Legionella pneumophila str. Paris]
 gi|53753647|emb|CAH15105.1| hypothetical protein lpl0871 [Legionella pneumophila str. Lens]
 gi|148282287|gb|ABQ56375.1| polysialic acid capsule expression protein [Legionella pneumophila
           str. Corby]
 gi|295648320|gb|ADG24167.1| polysialic acid capsule expression protein [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609632|emb|CBW99136.1| hypothetical protein LPW_09211 [Legionella pneumophila 130b]
          Length = 320

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 126/314 (40%), Positives = 197/314 (62%), Gaps = 7/314 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E + +  L   +       F  A E + + KGR+V+TG+GKSGHI +KLAST +ST
Sbjct: 10  VIETEAQAVFELTQRI----DEHFEKACELLLSCKGRIVVTGMGKSGHIANKLASTFSST 65

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G+P+FF+H  EASHGDLGMITR D+++ +S SG++ E+  +L   +R  +PLI +T   +
Sbjct: 66  GSPAFFMHPGEASHGDLGMITRQDIVVAISNSGNTHEIVTLLPLLKRLEVPLITLTGNKQ 125

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  AD+ L +  + E+CP GLAPTTS  + L +GDALAI+LL++R FS  DF + HP
Sbjct: 126 STLAKSADVNLDVSIKQEACPLGLAPTTSTTVSLVMGDALAISLLQARGFSAEDFALSHP 185

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG    +   D+ H+G+ +PL      + DA+  ++ K+ G   VVD    L G+ T
Sbjct: 186 GGALGKKLLLKIDDLCHTGEQLPLANENATVSDALIEVTNKKLGMTCVVDNHGYLVGVYT 245

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GDI R   +  ++NT  ++DVM KN + I +  L   A+ ++++++I+ L+VV++  + 
Sbjct: 246 DGDIRRTLTRQFNINTTLIKDVMTKNCRTISKGMLAAEALAIMQKYSITSLVVVENDNRP 305

Query: 327 IGIVHFLDLLRFGI 340
             ++H  DLL+ G+
Sbjct: 306 YAVLHLHDLLKAGV 319


>gi|327189614|gb|EGE56764.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli CNPAF512]
          Length = 331

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 181/330 (54%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIDIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+DD ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVIDDDRRPLGLVHFHDLLRIGV 330


>gi|256821878|ref|YP_003145841.1| KpsF/GutQ family protein [Kangiella koreensis DSM 16069]
 gi|256795417|gb|ACV26073.1| KpsF/GutQ family protein [Kangiella koreensis DSM 16069]
          Length = 326

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 140/327 (42%), Positives = 205/327 (62%), Gaps = 6/327 (1%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S ++   +  A R I  E   +++L+  L       F  A  K+   +G+VV+ G+GKSG
Sbjct: 4   SNLEQQILASAERVIDIETLAVTNLKQQLDKT----FVAACHKLLNCQGKVVVIGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIGSK+A+TLASTGTP+FFVH AEASHGDLGMI   D++I LS SG + E+ A+L   +R
Sbjct: 60  HIGSKMAATLASTGTPAFFVHPAEASHGDLGMIGELDVVIALSNSGETHEVTALLPVIKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             I LI+ITS + S +A  +D+ + +  E E+CPH LAPT S    LA+GDA+A++LLE+
Sbjct: 120 RGIELISITSNDSSSLAKASDLHIKVQVEQEACPHNLAPTASTTAVLALGDAMAVSLLEA 179

Query: 197 RNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF + HPGG LG   +    D+MHSG S P VK    + +A+  +++KR G   
Sbjct: 180 RGFTPDDFALSHPGGSLGKRLILQVDDLMHSGSSFPSVKPDVSIRNALFEMTDKRMGMTT 239

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V D+   L GI T+GD+ R F +D++    + DVM K  K +   TL   A+ L+ + +I
Sbjct: 240 VTDKQGNLLGIFTDGDLRRAFERDVDIDAPIGDVMTKGCKTVKTQTLAVDAVNLMEESSI 299

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD   K +G++H  DLL+ G++
Sbjct: 300 TSLIVVDSNDKPLGVIHMHDLLKAGVV 326


>gi|290511574|ref|ZP_06550943.1| arabinose-5-phosphate isomerase [Klebsiella sp. 1_1_55]
 gi|289776567|gb|EFD84566.1| arabinose-5-phosphate isomerase [Klebsiella sp. 1_1_55]
          Length = 328

 Score =  359 bits (923), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A+L   +R  + LI I
Sbjct: 70  TFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALLPVLKRQQVKLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V +   L DA+  ++ K  G  AV D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAVCDDDMNI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V D
Sbjct: 250 IGIFTDGDLRRVFDTGVDMRNASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  DLLR G++
Sbjct: 310 GD-HLLGVVHMHDLLRAGVV 328


>gi|218459106|ref|ZP_03499197.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli Kim 5]
          Length = 331

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 180/330 (54%), Positives = 244/330 (73%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGEHSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLTHVADIMHTGERVPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+ ++ +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVIDEDRRPLGLVHFHDLLRIGV 330


>gi|28198550|ref|NP_778864.1| polysialic acid capsule expression protein [Xylella fastidiosa
           Temecula1]
 gi|28056634|gb|AAO28513.1| polysialic acid capsule expression protein [Xylella fastidiosa
           Temecula1]
 gi|307579677|gb|ADN63646.1| polysialic acid capsule expression protein [Xylella fastidiosa
           subsp. fastidiosa GB514]
          Length = 333

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 137/327 (41%), Positives = 194/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 11  LSDTALIASARRVIEIEREALTLL----NERIGAPFVAACRLILNSHGRVISTGMGKSGH 66

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 67  IARKIAATLASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 126

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL++R
Sbjct: 127 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLDAR 186

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSGD +P V     L +A+  ++ KR G  A+
Sbjct: 187 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMTAI 246

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 247 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 306

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 307 NGLIVVDPQQRAVGALNIHDLLHAKIV 333


>gi|253686684|ref|YP_003015874.1| KpsF/GutQ family protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
 gi|251753262|gb|ACT11338.1| KpsF/GutQ family protein [Pectobacterium carotovorum subsp.
           carotovorum PC1]
          Length = 363

 Score =  359 bits (922), Expect = 3e-97,   Method: Composition-based stats.
 Identities = 136/336 (40%), Positives = 201/336 (59%), Gaps = 9/336 (2%)

Query: 10  SVTRKGHSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
              +K H L  +   Q A  + I  E+ GL+ L+  +       F  A +KI   +G+VV
Sbjct: 33  HTRQKSHELPADFDFQQAGKQVISIERDGLAQLDQYI----DDNFTLACKKIFDCQGKVV 88

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ 
Sbjct: 89  VMGMGKSGHIGCKMAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEIL 148

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPT+S    L +GDA
Sbjct: 149 SLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTSSTTATLVMGDA 208

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           LA+ALL++R F+  DF + HPGG LG    +  SD+MHSGD IP V     L DA+  ++
Sbjct: 209 LAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEIT 268

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K  G   + +   K++GI T+GD+ R F    DLN+  + DVM      +   TL   A
Sbjct: 269 RKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDA 328

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 329 LNLMQSRHITSVLVAEND-RLVGIVHMHDMLRAGVV 363


>gi|104780314|ref|YP_606812.1| hypothetical protein PSEEN1098 [Pseudomonas entomophila L48]
 gi|95109301|emb|CAK13998.1| conserved hypothetical protein; KpsF/GutQ family [Pseudomonas
           entomophila L48]
          Length = 324

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +  A R++  E   +  L + + G     F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSELIHSAQRTLRLELEAVEGLLARIDG----NFVKACELILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTPSFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTPSFFVHPAEASHGDMGMITRDDVILALSNSGSTAEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 QMISLTGNPDSPLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSG+ +P V+ G  L DA+  +S K  G   V++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGEELPKVQRGTLLKDALLEMSRKGLGMTVVLE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL G+ T+GD+ R+  +  D++   +++VM  + K    + L   A++++  H IS 
Sbjct: 240 SDGKLAGVFTDGDLRRSLDRSIDIHKTLIDEVMTVHGKTARAEMLAAEALKIMEDHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDRDDRPTGALNMHDLLRAGVM 324


>gi|71897590|ref|ZP_00679835.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
 gi|71732493|gb|EAO34546.1| KpsF/GutQ [Xylella fastidiosa Ann-1]
          Length = 345

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 137/327 (41%), Positives = 193/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 23  LSDTALIASARRVIEIEREALTLL----NERIGAPFVAACRLILNSHGRVISTGMGKSGH 78

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 79  IARKIAATLASTGTPGFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 138

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL++R
Sbjct: 139 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLDAR 198

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSGD +P V     L +A+  ++ KR G  A+
Sbjct: 199 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGDDLPAVHEEATLSEALLEMTRKRLGMTAI 258

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 259 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 318

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 319 NGLIVVDPQQRAVGALNIHDLLHAKIV 345


>gi|238751357|ref|ZP_04612850.1| Arabinose 5-phosphate isomerase [Yersinia rohdei ATCC 43380]
 gi|238710415|gb|EEQ02640.1| Arabinose 5-phosphate isomerase [Yersinia rohdei ATCC 43380]
          Length = 366

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L   +  +    F  A E I + +G++V+ G+GKSGHIG K+A+
Sbjct: 52  QAGKQVLQIEREGLAQLSQYINDD----FAAACEAIFSCRGKIVVMGMGKSGHIGCKIAA 107

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 108 TFASTGTPSFFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIQLICM 167

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 168 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 227

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + D+   +
Sbjct: 228 ALSHPGGALGRKLLLRISDIMHTGDDIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 287

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 288 KGIFTDGDLRRVFDMGVDLNHAKITDVMTSGGIRVPPTMLAVDALNLMESRHITAVLVAD 347

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G+VH  D+LR G++
Sbjct: 348 GD-KLLGVVHMHDMLRAGVV 366


>gi|15838014|ref|NP_298702.1| polysialic acid capsule expression protein [Xylella fastidiosa
           9a5c]
 gi|9106425|gb|AAF84222.1|AE003972_7 polysialic acid capsule expression protein [Xylella fastidiosa
           9a5c]
          Length = 333

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 192/327 (58%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +  A R I  E+  L+ L       +   F  A   I    GRV+ TG+GKSGH
Sbjct: 11  LSDTALIASARRVIEIEREALTLL----NERIGTPFVAACRLILNSHGRVISTGMGKSGH 66

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+T ASTGTP+FFVH  EA HGDLGMIT  D+I+ LS+SG SDE++ +L   +R 
Sbjct: 67  IARKIAATFASTGTPAFFVHPGEAGHGDLGMITDSDVILALSYSGESDEVRMLLPVLKRQ 126

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             P+IA+T   +S +A  AD+ L +    E+CP  LAPT+S    L IGDALA+ALL+ R
Sbjct: 127 GNPIIAMTGRPQSTLAQAADVHLDVSVTTEACPLDLAPTSSTTTSLVIGDALAVALLDVR 186

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HP G LG    +  +DVMHSG+ +P V     L +A+  ++ KR G  A+
Sbjct: 187 GFTAEDFARSHPAGHLGRRLLLHITDVMHSGNDLPAVHEEATLSEALLEMTRKRLGMTAI 246

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L+G+ T+GD+ R      D+    + +VM ++PK I  D L   A +L+  + I
Sbjct: 247 VDNEGRLQGVFTDGDLRRALDSNIDVRNARINEVMTRHPKTINADQLAAEAARLMEANKI 306

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VVD  Q+A+G ++  DLL   I+
Sbjct: 307 NGLIVVDPQQRAVGALNIHDLLHAKIV 333


>gi|218674867|ref|ZP_03524536.1| KpsF/GutQ family protein [Rhizobium etli GR56]
          Length = 331

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 193/330 (58%), Positives = 248/330 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++   L++NS ++ A R+I  EKRGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNKRAVKLVENSVLESAKRTIETEKRGLEALERAFHNGLAVPFSRAVETIGNISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+FFVHAAEA+HGDLGMI + D+II +SWSG + ELKAI
Sbjct: 61  GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQSDVIIAISWSGQAQELKAI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L Y+RRFSIPLIAIT + +S +   ADIVL LPKE E+CPHGLAPTTSAIMQLAIGDALA
Sbjct: 121 LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKEIEACPHGLAPTTSAIMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R FS  DF+V HPGGKLG      +D+MH+G+ +PLV  G P+ +AIT+LS K 
Sbjct: 181 VALLEARGFSATDFHVFHPGGKLGASLTHVADIMHTGERLPLVAKGTPMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+DE  +L GI+TEGD+ RN  ++L  L+V+D+M K PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDEEGRLCGIVTEGDMARNLTRNLAELAVDDIMTKTPKTVKPTILATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+VVDD  + +G+VHF DLLR G+
Sbjct: 301 QHSIGALIVVDDDSRPVGLVHFHDLLRIGV 330


>gi|325926072|ref|ZP_08187435.1| KpsF/GutQ family protein [Xanthomonas perforans 91-118]
 gi|325543530|gb|EGD14950.1| KpsF/GutQ family protein [Xanthomonas perforans 91-118]
          Length = 333

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 203/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              S   S T    SL     V    R +  E+  L+S+ + +  E    F  A   + A
Sbjct: 1   MAVSPLPSATVSDASL-----VASGQRVLQIEREALASVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTGSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIGAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|300918959|ref|ZP_07135514.1| arabinose 5-phosphate isomerase [Escherichia coli MS 115-1]
 gi|300413901|gb|EFJ97211.1| arabinose 5-phosphate isomerase [Escherichia coli MS 115-1]
          Length = 328

 Score =  359 bits (921), Expect = 4e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++ H+I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSHHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|91212622|ref|YP_542608.1| D-arabinose 5-phosphate isomerase [Escherichia coli UTI89]
 gi|237706051|ref|ZP_04536532.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 3_2_53FAA]
 gi|254038362|ref|ZP_04872420.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 1_1_43]
 gi|332279972|ref|ZP_08392385.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|91074196|gb|ABE09077.1| putative isomerase [Escherichia coli UTI89]
 gi|226839986|gb|EEH72007.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 1_1_43]
 gi|226899091|gb|EEH85350.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 3_2_53FAA]
 gi|332102324|gb|EGJ05670.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
          Length = 335

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 21  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 77  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 197 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 257 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 317 GD-HLLGVLHMHDLLRAGVV 335


>gi|94501782|ref|ZP_01308295.1| KpsF/GutQ [Oceanobacter sp. RED65]
 gi|94426090|gb|EAT11085.1| KpsF/GutQ [Oceanobacter sp. RED65]
          Length = 322

 Score =  359 bits (921), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 130/326 (39%), Positives = 196/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + ++   R+I  E+  +  L  +L  E     + A + +   +GR+V+TG+GKSGHI
Sbjct: 1   MSFNYIESIQRTIADERDAVDQLLKNLNHE---ALNTACDLLLNCQGRIVVTGMGKSGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTG+P+FFVH  EA+HGD+GMIT  D++I LS SG S E+  ++   +R +
Sbjct: 58  GNKIAATLASTGSPAFFVHPGEAAHGDMGMITEQDVVIALSNSGESSEVTTLIPLLKRLN 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLI++T  + S +A  AD  + +  E E+CP  LAPT+S  + L +GDALAIALLE+R 
Sbjct: 118 VPLISMTGNDTSTLATGADSHINVGVEKEACPLDLAPTSSTTVALVMGDALAIALLEARG 177

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+   F   HPGG LG    +    +MH G  IP VK    + DA+  +++K  G   V+
Sbjct: 178 FTAEQFAFSHPGGSLGRKLLLKVKTIMHCGSQIPQVKPDTLVKDALIEMTQKGLGMTTVI 237

Query: 258 DEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           DE  +L GI T+GD+ R   KD+  +T  V+ VM      I  + L   A+Q++ +  I+
Sbjct: 238 DEHGQLSGIFTDGDLRRTLDKDIDFHTTPVQAVMTTGVTTIDPERLAAEALQVMEEKKIN 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L V  +  K  G+++  DLLR G+I
Sbjct: 298 AL-VATENGKVAGVINMHDLLRAGVI 322


>gi|260846010|ref|YP_003223788.1| D-arabinose 5-phosphate isomerase [Escherichia coli O103:H2 str.
           12009]
 gi|257761157|dbj|BAI32654.1| D-arabinose 5-phosphate isomerase [Escherichia coli O103:H2 str.
           12009]
          Length = 328

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ LE  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELEQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|227112738|ref|ZP_03826394.1| D-arabinose 5-phosphate isomerase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 363

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 137/340 (40%), Positives = 202/340 (59%), Gaps = 9/340 (2%)

Query: 6   SHFKSVTRKGHSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           S      +K H L  +   Q A  + +  E+ GL+ L+  +       F  A +KI   +
Sbjct: 29  SQTGHRLQKAHELPADFDFQQAGKQVLSIERDGLAQLDQYI----DDNFTLACKKIFDCQ 84

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S
Sbjct: 85  GKVVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGES 144

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L 
Sbjct: 145 HEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLV 204

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R F+  DF + HPGG LG    +  SD+MHSGD IP V     L DA+
Sbjct: 205 MGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDAL 264

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             ++ K  G   + +   K++GI T+GD+ R F    DLN+  + DVM      +   TL
Sbjct: 265 VEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTL 324

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              A+ L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 325 AVDALNLMQSRHITSVLVAEND-RLVGIVHMHDMLRAGVV 363


>gi|229588431|ref|YP_002870550.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens SBW25]
 gi|229360297|emb|CAY47154.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens SBW25]
          Length = 324

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 203/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L + +  +    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLELEAVEGLLAHIDAD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT +FFVH AEASHGD+GMIT+DD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTAFFVHPAEASHGDMGMITKDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I+IT   +S +A  A++ L +  + E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 QMISITGNPESTLAKAAEVNLNVHVDHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD +P V+ G  L DA+  ++ K  G   +++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDELPHVQRGTLLKDALMEMTRKGLGMTVILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L G+ T+GD+ R   +  D++T S++ VM  + K    + L   A++++  H I  
Sbjct: 240 ADGRLAGVFTDGDLRRTLDRTIDIHTASIDAVMTPHGKTARPEMLAAEALKIMEDHKIGA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + IG ++  DLLR G++
Sbjct: 300 LVVVDGDDRPIGALNMHDLLRAGVM 324


>gi|206576969|ref|YP_002236391.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae 342]
 gi|288933375|ref|YP_003437434.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|206566027|gb|ACI07803.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae 342]
 gi|288888104|gb|ADC56422.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
          Length = 328

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  + LI I
Sbjct: 70  TFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRQQVKLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V +   L DA+  ++ K  G  AV D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAVCDDDMNI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V D
Sbjct: 250 IGIFTDGDLRRVFDTGVDMRNASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  DLLR G++
Sbjct: 310 GD-HLLGVVHMHDLLRAGVV 328


>gi|53804948|ref|YP_113249.1| sugar isomerase, KpsF/GutQ [Methylococcus capsulatus str. Bath]
 gi|53758709|gb|AAU93000.1| sugar isomerase, KpsF/GutQ [Methylococcus capsulatus str. Bath]
          Length = 330

 Score =  358 bits (920), Expect = 5e-97,   Method: Composition-based stats.
 Identities = 132/328 (40%), Positives = 194/328 (59%), Gaps = 8/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +L + +    A+  I  E   +S+L   +       F      I    GRVV+TG+GKSG
Sbjct: 8   ALDERTLCALAVNVINTEAAAISALADRIDS----NFAAGCRLILGCHGRVVVTGMGKSG 63

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+ASTLASTGTP+FFV+  EA HGDLGMITR+D+++ LS SG + EL  IL   +R
Sbjct: 64  HIGGKIASTLASTGTPAFFVNPGEACHGDLGMITRNDVVLALSNSGETAELLTILPLIKR 123

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             IPLIA+T    S +A  + I L    + E+CP GLAPT+S    LA+GDALA+ALLE+
Sbjct: 124 LGIPLIAMTGNRLSTLARQSSIHLDTGVQQEACPLGLAPTSSTTAALAMGDALAVALLEA 183

Query: 197 RNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+  DF   HPGG LG   +    D+MH+GD  P++ +   + DA+  ++ K+ G  A
Sbjct: 184 RGFTREDFAFSHPGGSLGRRLLTFVRDIMHTGDDTPVIGLEASVRDALLEMTAKKLGMTA 243

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +VD    ++G+ T+GD+ R   K  D++   +  VM ++   +    L   A++++ Q  
Sbjct: 244 IVDGAGTIQGVFTDGDLRRLLEKAQDIHATPITAVMTRSCVTVEGSLLAAEAVRIMEQKR 303

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L VV +  + IG ++  DLLR G++
Sbjct: 304 INALPVV-ENGRLIGAINMHDLLRAGVL 330


>gi|170765843|ref|ZP_02900654.1| arabinose 5-phosphate isomerase [Escherichia albertii TW07627]
 gi|170124989|gb|EDS93920.1| arabinose 5-phosphate isomerase [Escherichia albertii TW07627]
          Length = 328

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QTGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEISALIPVLKRLRVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPDSSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              + +G++H  DLLR G++
Sbjct: 310 GD-RLLGVLHMHDLLRAGVV 328


>gi|110807063|ref|YP_690583.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 5 str. 8401]
 gi|110616611|gb|ABF05278.1| putative isomerase [Shigella flexneri 5 str. 8401]
 gi|281602580|gb|ADA75564.1| Arabinose 5-phosphate isomerase [Shigella flexneri 2002017]
          Length = 335

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 21  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH +EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 77  TFASTGTPSFFVHPSEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 197 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 257 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 317 GD-HLLGVLHMHDLLRAGVV 335


>gi|78222492|ref|YP_384239.1| KpsF/GutQ [Geobacter metallireducens GS-15]
 gi|78193747|gb|ABB31514.1| KpsF/GutQ [Geobacter metallireducens GS-15]
          Length = 321

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 139/323 (43%), Positives = 197/323 (60%), Gaps = 9/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A + I  E   L +L  S+ GE    F  AV +I + KGRVV+TG+GKSG IG K+
Sbjct: 2   IIEEARKVIRIEADALMALADSINGE----FEQAVRRILSTKGRVVVTGMGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LI
Sbjct: 58  ASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVRILPIIKRLGASLI 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           +++   KS +A   D+ L +  + E+CP GLAPT S    LA+GDALA+ALL  R F   
Sbjct: 118 SMSGNPKSSLAKAGDVFLDISVKEEACPLGLAPTASTTATLAMGDALAVALLLERGFRPE 177

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG    +   D+MH+GD++P+V    P+ DA+ ++S K  G   VVD   
Sbjct: 178 DFALFHPGGSLGKKLLLTVGDLMHAGDAVPIVTSDTPMRDALFVISSKGLGVTGVVDGSG 237

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G+IT+GD+ R   K L    L   ++M +NPK I    L   A+Q + Q++I+ L V
Sbjct: 238 ALLGVITDGDLRRALSKGLAVLELPAGELMSRNPKRIKRGELAAKALQRMEQYSITSLFV 297

Query: 320 V--DDCQKAIGIVHFLDLLRFGI 340
              DD  + +G++H  DLL+ G+
Sbjct: 298 FEGDDDAQPVGVIHLHDLLKAGL 320


>gi|253991148|ref|YP_003042504.1| D-arabinose 5-phosphate isomerase [Photorhabdus asymbiotica subsp.
           asymbiotica ATCC 43949]
 gi|253782598|emb|CAQ85762.1| arabinose 5-phosphate isomerase) [Photorhabdus asymbiotica]
          Length = 322

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 129/327 (39%), Positives = 196/327 (59%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K    Q   R +  E+ GL+ LE  +  +    F    E +   +G+V++ G+GKSGH
Sbjct: 1   MPKIDFQQAGKRVLHIERDGLAELEQYINED----FTRTCELMFNCEGKVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ +++   +R 
Sbjct: 57  IGCKIAATFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILSLIPALKRQ 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLI +T+ + S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R
Sbjct: 117 KIPLICMTNNHNSSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  SD+M++GD IP +     L +A+  ++ K+ G   +
Sbjct: 177 GFTAEDFALSHPGGALGRKLLLLVSDLMNTGDDIPRINRDSSLREALVEITRKKLGMTVI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            DE   + GI T+GD+ R F    DL  + + DVM      I  + L   A+ L++  +I
Sbjct: 237 CDENMHIDGIFTDGDLRRVFDMGIDLYNVKISDVMTAGGIRIKPNALAVDALNLMQSRHI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + ++V  +  K +G++H  DLL+ G++
Sbjct: 297 TSVLVT-EGNKLLGVLHMHDLLQAGVV 322


>gi|90418890|ref|ZP_01226801.1| sugar isomerase, capsule expression protein [Aurantimonas
           manganoxydans SI85-9A1]
 gi|90336970|gb|EAS50675.1| sugar isomerase, capsule expression protein [Aurantimonas
           manganoxydans SI85-9A1]
          Length = 360

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 161/316 (50%), Positives = 222/316 (70%), Gaps = 1/316 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A+R++  E  GL +L + L+ E++  F   ++ I  I GR++ITG+GKSGHIG+K+A+
Sbjct: 45  QSAVRTVTTEADGLRALAALLEAEMAEPFERVLDLIAEITGRLIITGVGKSGHIGAKIAA 104

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH +EA+HGDLGMI RDD ++ +SWSG + ELK I+ Y RRF +PLIA+
Sbjct: 105 TFASTGTPAFFVHPSEANHGDLGMIGRDDAVLAMSWSGETTELKGIVAYTRRFKLPLIAM 164

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  AD+ L LP+  E+CPHGLAPT+S  +Q A+GDALA+ALLE R F+  DF
Sbjct: 165 TSRPSSTLAREADVALLLPRVAEACPHGLAPTSSTTLQAALGDALAVALLERRGFTPGDF 224

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +V HPGG+LG   V   D+MH G+++PLV  G  + +AI ++S K FGC AVVD G  L 
Sbjct: 225 HVFHPGGQLGASLVHVGDLMHVGEALPLVASGTTMAEAIIVMSRKSFGCAAVVDAGGCLI 284

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+   DL   +V+ VM  NPK I  +TL   A++++   NI+ LMVV   +
Sbjct: 285 GIVTDGDLRRHLGPDLLAQTVDTVMTANPKTITPETLAAKALEMVNSSNITALMVV-RDR 343

Query: 325 KAIGIVHFLDLLRFGI 340
           + +GIVH  DLLR G+
Sbjct: 344 RPVGIVHMHDLLRIGV 359


>gi|91975344|ref|YP_568003.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5]
 gi|91681800|gb|ABE38102.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB5]
          Length = 336

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 171/332 (51%), Positives = 231/332 (69%), Gaps = 1/332 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K    K       + +  ALR++ AE  G+++L ++LQ +L   F  A+E I+  KGR++
Sbjct: 5   KPNITKSAMTDSAAAIPSALRTLEAEADGVTALAAALQSDLGGAFVAAIEMIRNAKGRLI 64

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ITG+GKSGHIG K+A+T ASTGTP+FFVHA+EASHGDLGMIT DD+I+ +SWSG   E+K
Sbjct: 65  ITGLGKSGHIGRKIAATFASTGTPAFFVHASEASHGDLGMITADDIILAMSWSGEQPEMK 124

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++ YA RF I LIA+TS+N S +A  ADI LTLPK  E+CPH LAPTTS++M LA+GDA
Sbjct: 125 NLITYASRFKIALIAMTSDNGSTLAKAADISLTLPKAREACPHNLAPTTSSLMMLALGDA 184

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           +AIALLESR F+  DF VLHPGGKLG +   A D+MH+G++IPL  +G  + DA+  +S 
Sbjct: 185 IAIALLESRGFTSTDFSVLHPGGKLGAMLKYARDLMHTGEAIPLKPLGTKMSDALVEMSA 244

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K FGCV +VD   ++ GI+T+GD+ R+   DL T  V++VM K PK I    L    ++L
Sbjct: 245 KGFGCVGIVDANGQIAGIVTDGDLRRHMRPDLMTAIVDEVMTKRPKTISPGLLAGETLEL 304

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L    I+ L+V  + +K +GIVH  DLLR G+
Sbjct: 305 LNSSKITALLVT-EGKKPVGIVHLHDLLRAGV 335


>gi|237730117|ref|ZP_04560598.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
 gi|226908723|gb|EEH94641.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
          Length = 335

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EKI +  G+VV+ G+GKSGHIG K+A+
Sbjct: 21  QAGKEVLAIEREGLAELDQYIN----HNFTLACEKIFSCPGKVVVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM++  D++I +S SG S+E+ A++   +R  +PLI +
Sbjct: 77  TFASTGTPSFFVHPGEAAHGDLGMVSPQDVVIAISNSGESNEIAALIPVLKRLHVPLICM 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 197 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVTKNASLRDALIEITRKNLGMTVICDDAMKI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 257 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVMVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 317 GDQ-LLGVLHMHDLLRAGVV 335


>gi|300024165|ref|YP_003756776.1| KpsF/GutQ family protein [Hyphomicrobium denitrificans ATCC 51888]
 gi|299525986|gb|ADJ24455.1| KpsF/GutQ family protein [Hyphomicrobium denitrificans ATCC 51888]
          Length = 343

 Score =  358 bits (920), Expect = 6e-97,   Method: Composition-based stats.
 Identities = 166/320 (51%), Positives = 230/320 (71%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            ++V  A+R++  E  GL  L S L G+L+  F  A+ ++ A+KGRV++TGIGKSGH+G 
Sbjct: 24  KASVASAVRTLNLESEGLVQLASELNGDLAGPFEEAMRRLVAVKGRVIVTGIGKSGHVGQ 83

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVH +EASHGDLGM+TR DLI+ LSWSG + ELK I+ Y+RRF++P
Sbjct: 84  KIAATFASTGTPAFFVHPSEASHGDLGMVTRSDLILALSWSGETVELKPIITYSRRFAVP 143

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS+ KS +   AD+VL LP+  E+CPHGLAPTTS  MQLA+GD+LAIALLE+R F+
Sbjct: 144 LIAITSQAKSALGEQADVVLLLPRTKEACPHGLAPTTSTTMQLALGDSLAIALLEARGFT 203

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF + HPGG LG      SD+MH G+ +PL+K G  + +A+  ++EK FGCV VV++ 
Sbjct: 204 AHDFKIFHPGGSLGANLKYVSDIMHKGERLPLIKSGETMANALVTMTEKSFGCVGVVEKR 263

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+IT+GD+ R+   DL   SV+ +M   PK I    L + A++L+   +I+ L VV
Sbjct: 264 GRLIGVITDGDLRRHMGADLVRASVDQIMTAKPKTISPTMLASAALELINASSITALFVV 323

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +  QK +G+VH  DLLR G+
Sbjct: 324 EK-QKPVGLVHIHDLLRLGV 342


>gi|325498778|gb|EGC96637.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ECD227]
          Length = 335

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +       F  A EK+    G+V++ G+GKSGHIG K+A+
Sbjct: 21  KAGKEVLAIEREGLADLDQYIDQ----NFTLACEKLFWCTGKVIVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 77  TFASTGTPSFFVHPGEAAHGDLGMVTSQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGRPDSSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 197 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVTKNASLRDALLEITRKNLGMTVICDDNMKI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D
Sbjct: 257 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVLVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 317 GD-HLLGVLHMHDLLRAGVV 335


>gi|307544518|ref|YP_003896997.1| KpsF/GutQ family protein [Halomonas elongata DSM 2581]
 gi|307216542|emb|CBV41812.1| KpsF/GutQ family protein [Halomonas elongata DSM 2581]
          Length = 328

 Score =  358 bits (919), Expect = 7e-97,   Method: Composition-based stats.
 Identities = 147/325 (45%), Positives = 199/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +     A+R++  E++ + +L   +       F  A E I A  GRVV+TG+GKSGHIG
Sbjct: 8   SSQLRASAIRTLTLEQQAIGALIEHI----DEGFERACELILACSGRVVVTGMGKSGHIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG + E+ A+L   +R   
Sbjct: 64  GKIAATLASTGTPAFFVHPGEASHGDLGMITPGDVVLALSHSGETAEVTALLPLLKRLGT 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI++T    S +  HAD  L    E E+CP  LAPT+S    LA+GDALA+ALLESR F
Sbjct: 124 PLISMTGRPASTLGRHADAHLYAGVEREACPLDLAPTSSTTAALALGDALAVALLESRGF 183

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF + HPGG LG  L +  SD+MH GD +P V  G PL DA+  ++ +  G   VVD
Sbjct: 184 TAEDFALSHPGGSLGKRLLLRVSDLMHQGDRLPRVASGSPLRDALLEITRQGLGFTCVVD 243

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L G+ T+GD+ R    H DL+ L V+DVM    K I  DTL   A++++  + I+ 
Sbjct: 244 PDDRLVGVYTDGDLRRTLDQHADLSGLKVDDVMTAPGKRISPDTLAAEAVRIMEDNRITA 303

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L VVDD    +G +H  DLL  G+I
Sbjct: 304 LAVVDDEGHPVGALHMHDLLASGVI 328


>gi|194434493|ref|ZP_03066753.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1012]
 gi|194417272|gb|EDX33381.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1012]
 gi|320181472|gb|EFW56390.1| Arabinose 5-phosphate isomerase [Shigella boydii ATCC 9905]
 gi|332086519|gb|EGI91666.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 155-74]
          Length = 328

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 KGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|238764274|ref|ZP_04625226.1| Arabinose 5-phosphate isomerase [Yersinia kristensenii ATCC 33638]
 gi|238697555|gb|EEP90320.1| Arabinose 5-phosphate isomerase [Yersinia kristensenii ATCC 33638]
          Length = 345

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 31  QAGKQVLQIEREGLAQLDQYINDD----FARACEAIFNCHGKVVVMGMGKSGHIGCKIAA 86

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 87  TFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALIPVLKRQKIQLICM 146

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 147 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 206

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +
Sbjct: 207 ALSHPGGALGRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 266

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM K    +  + L    + L+   +I+ ++V D
Sbjct: 267 KGIFTDGDLRRVFDMGIDLNHAKIADVMTKGGIRVRPNLLAVDVLNLMESRHITAVLVAD 326

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 327 GDQ-LLGVVHMHDMLRAGVV 345


>gi|37527888|ref|NP_931233.1| D-arabinose 5-phosphate isomerase [Photorhabdus luminescens subsp.
           laumondii TTO1]
 gi|36787324|emb|CAE16408.1| unnamed protein product [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 322

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 131/327 (40%), Positives = 195/327 (59%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K    Q   + +  E+ GL+ LE  + G+    F    E +   +G+V++ G+GKSGH
Sbjct: 1   MPKIDFQQAGKKVLHIERDGLTELEQHINGD----FDRTCELMFNCEGKVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S E+ +++   +R 
Sbjct: 57  IGCKIAATFASTGTPSFFVHPGEASHGDLGMITPKDIVLAISNSGESSEILSLIPALKRQ 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLI +T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R
Sbjct: 117 KIPLICMTNNCNSSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  SD+M +GD IP V     L +A+  ++ ++ G   +
Sbjct: 177 GFTAEDFALSHPGGTLGRKLLLLVSDLMSTGDDIPKVNRNATLREALLEITRQKLGMTVI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            DE + + GI T+GD+ R F    DL  + + DVM      I    L   A+ L++ H+I
Sbjct: 237 CDENRYIDGIFTDGDLRRVFDMGVDLYNVKISDVMTTGGIRIKPHALAVDALNLMQSHHI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V  +  K +G++H  DLL+ G++
Sbjct: 297 TSLLVA-EDNKLLGVLHMHDLLQAGVV 322


>gi|331684844|ref|ZP_08385436.1| arabinose 5-phosphate isomerase [Escherichia coli H299]
 gi|331078459|gb|EGI49665.1| arabinose 5-phosphate isomerase [Escherichia coli H299]
          Length = 328

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   KS +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPKSSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|209550883|ref|YP_002282800.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
 gi|209536639|gb|ACI56574.1| KpsF/GutQ family protein [Rhizobium leguminosarum bv. trifolii
           WSM2304]
          Length = 331

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 187/330 (56%), Positives = 248/330 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+  +L++NS ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNRRAINLVENSVLESAKRTIETERRGLEALEQAFDNGLAGPFTRAVEVIGDITGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+FFVHAAEA+HGDLGMI + D II +SWSG + ELKAI
Sbjct: 61  GVGKSGHIGVKIAATLASTGTPAFFVHAAEANHGDLGMIGQGDAIIAVSWSGQAQELKAI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L Y+RRFSIPLIAIT + +S +   ADIVL LPKE E+CPHGLAPTTSAIMQLAIGDALA
Sbjct: 121 LSYSRRFSIPLIAITYDEESSLGLAADIVLKLPKETEACPHGLAPTTSAIMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G  + +AIT+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTAMPEAITVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+D   +L GI+TEGD+ RN  ++L+ L+V+D+M + PK +    L T A+ LL 
Sbjct: 241 FGCVGVLDGDGRLCGIVTEGDMARNLTRNLSELAVDDIMTRTPKTVKPTMLATAALALLN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QH+I  L+V+D+  + +G+VHF DLLR G+
Sbjct: 301 QHHIGALIVIDEDHRPVGLVHFHDLLRIGV 330


>gi|222149732|ref|YP_002550689.1| capsule expression protein [Agrobacterium vitis S4]
 gi|221736714|gb|ACM37677.1| capsule expression protein [Agrobacterium vitis S4]
          Length = 331

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 177/330 (53%), Positives = 235/330 (71%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + +    L++ S ++ ALR +  E+ GL++LE +L G L+  F  A++ I    GRV+++
Sbjct: 1   MNKLAVKLVEASAIKAALRVVATEQSGLAALEEALAGYLAGPFCNAIDVIGKSSGRVIVS 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTGTP+FF+H AEA+HGDLGMI RDD++I LSW G S EL  I
Sbjct: 61  GVGKSGHIGGKIAATFASTGTPAFFIHPAEANHGDLGMIARDDVVIALSWGGESTELNGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L + RRFSIPLIAIT+  +S +A  ADIVL +PK  E+CPHGLAPTTS +MQ+A+GDALA
Sbjct: 121 LSFTRRFSIPLIAITAGEQSTLAREADIVLLMPKVQEACPHGLAPTTSTMMQMALGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F  NDF   HPGGKLG +     D+MH G+ +PLV  G  + +AI +LS+KR
Sbjct: 181 LALLEARGFGPNDFKTFHPGGKLGAMLTHVGDMMHIGEDVPLVPEGTSVPEAIIMLSQKR 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V D   +L GIIT+GDI RN +++L    VE+VM ++PK +  +TL T AM +L 
Sbjct: 241 FGCVGVTDSANRLVGIITDGDIARNLNRNLGERMVEEVMTRHPKTVHTETLATTAMAILN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           QHNIS L V D+     GI+HF DLLR G+
Sbjct: 301 QHNISALFVTDEDGVPNGIIHFHDLLRIGV 330


>gi|15803737|ref|NP_289771.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 EDL933]
 gi|15833330|ref|NP_312103.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           Sakai]
 gi|168751603|ref|ZP_02776625.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4113]
 gi|168754179|ref|ZP_02779186.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4401]
 gi|168763734|ref|ZP_02788741.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4501]
 gi|168769053|ref|ZP_02794060.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4486]
 gi|168777252|ref|ZP_02802259.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4196]
 gi|168781341|ref|ZP_02806348.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4076]
 gi|168786083|ref|ZP_02811090.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC869]
 gi|168800911|ref|ZP_02825918.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC508]
 gi|195940053|ref|ZP_03085435.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208809687|ref|ZP_03252024.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208812147|ref|ZP_03253476.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208818568|ref|ZP_03258888.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209396758|ref|YP_002272667.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4115]
 gi|217327071|ref|ZP_03443154.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254795146|ref|YP_003079983.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|261228208|ref|ZP_05942489.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           FRIK2000]
 gi|261255064|ref|ZP_05947597.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           FRIK966]
 gi|37079503|sp|Q8X9J0|KDSD_ECO57 RecName: Full=Arabinose 5-phosphate isomerase
 gi|12517815|gb|AAG58331.1|AE005548_2 putative isomerase [Escherichia coli O157:H7 str. EDL933]
 gi|13363549|dbj|BAB37499.1| putative isomerase [Escherichia coli O157:H7 str. Sakai]
 gi|187767457|gb|EDU31301.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4196]
 gi|188014385|gb|EDU52507.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4113]
 gi|189001004|gb|EDU69990.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4076]
 gi|189358615|gb|EDU77034.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4401]
 gi|189361734|gb|EDU80153.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4486]
 gi|189366147|gb|EDU84563.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4501]
 gi|189374048|gb|EDU92464.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC869]
 gi|189376830|gb|EDU95246.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC508]
 gi|208729488|gb|EDZ79089.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4206]
 gi|208733424|gb|EDZ82111.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4045]
 gi|208738691|gb|EDZ86373.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4042]
 gi|209158158|gb|ACI35591.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4115]
 gi|209758070|gb|ACI77347.1| putative isomerase [Escherichia coli]
 gi|209758072|gb|ACI77348.1| putative isomerase [Escherichia coli]
 gi|209758076|gb|ACI77350.1| putative isomerase [Escherichia coli]
 gi|217319438|gb|EEC27863.1| arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14588]
 gi|254594546|gb|ACT73907.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|320189550|gb|EFW64209.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC1212]
 gi|326337897|gb|EGD61731.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           1125]
 gi|326347467|gb|EGD71192.1| Arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           1044]
          Length = 328

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  IPLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHIPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|218706817|ref|YP_002414336.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|293406806|ref|ZP_06650732.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1412]
 gi|298382547|ref|ZP_06992144.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1302]
 gi|300897965|ref|ZP_07116341.1| arabinose 5-phosphate isomerase [Escherichia coli MS 198-1]
 gi|218433914|emb|CAR14831.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|291426812|gb|EFE99844.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1412]
 gi|298277687|gb|EFI19203.1| D-arabinose 5-phosphate isomerase [Escherichia coli FVEC1302]
 gi|300358313|gb|EFJ74183.1| arabinose 5-phosphate isomerase [Escherichia coli MS 198-1]
          Length = 328

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSISDVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|154707503|ref|YP_001424157.1| arabinose-5-phosphate isomerase [Coxiella burnetii Dugway
           5J108-111]
 gi|154356789|gb|ABS78251.1| arabinose-5-phosphate isomerase [Coxiella burnetii Dugway
           5J108-111]
          Length = 324

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 133/315 (42%), Positives = 198/315 (62%), Gaps = 7/315 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E R + SL + +      +F  A   +   KGRVV+ G+GKSGHI  K+A+TLAST
Sbjct: 14  VIATELRAIQSLHARI----DEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLAST 69

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSF+VH +EASHGD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +
Sbjct: 70  GTPSFYVHPSEASHGDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQ 129

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  AD V+ +  E E+CP GLAPT+S    L +GDALAIALLE+R F+ NDF  +HP
Sbjct: 130 STLARIADTVIDVSVEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTANDFARIHP 189

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG    +  +D+MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T
Sbjct: 190 GGSLGRRLLLHIADLMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFT 249

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GD+ R   K  D++   +E VM KN   +    L   A+++++Q+ I+ L+VVD     
Sbjct: 250 DGDLRRTLDKGYDIHRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASP 309

Query: 327 IGIVHFLDLLRFGII 341
           +G++H  DLLR G+I
Sbjct: 310 VGVIHMHDLLRAGVI 324


>gi|313673395|ref|YP_004051506.1| kpsf/gutq family protein [Calditerrivibrio nitroreducens DSM 19672]
 gi|312940151|gb|ADR19343.1| KpsF/GutQ family protein [Calditerrivibrio nitroreducens DSM 19672]
          Length = 320

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 192/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  ++  E   +      +       F  AVE I   +GRV++TG+GKSG IG K
Sbjct: 2   NLIEIAKETMKIEAEAILRTAERIN----ENFEKAVEIILNCEGRVIVTGMGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T++STGTPS F+H AE  HGDLG+IT  D II +S SG +DEL +IL   +   + +
Sbjct: 58  IAATMSSTGTPSIFLHPAEGVHGDLGVITSKDCIIAISNSGETDELISILPVIKMLGVKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A  +D VL      E+CP  LAPT S  + LA+GDALA+ALL  R F +
Sbjct: 118 IAMVGRIDSTLAKKSDCVLDASVIKEACPLNLAPTASTTVALAMGDALAVALLNKRGFKK 177

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG  L +   D+ H+G  +P+V+    + D+I  ++ K FGC  VVD+ 
Sbjct: 178 EDFAMFHPSGTLGKRLLIKVEDLYHTGSELPVVRYDRTVADSIFEMTSKGFGCTTVVDDN 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI+T+GD+ R   K  DL    V +V  KNPK I +D L   A+Q++   +I+ L+
Sbjct: 238 GKLVGILTDGDLRRGMQKYRDLFEKKVYEVCTKNPKTIEKDALAARALQVMENKSITSLV 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           +VDD  +  GI+H  D+L+ GI+
Sbjct: 298 IVDDEGRPEGIIHIHDILKKGIV 320


>gi|154252349|ref|YP_001413173.1| KpsF/GutQ family protein [Parvibaculum lavamentivorans DS-1]
 gi|154156299|gb|ABS63516.1| KpsF/GutQ family protein [Parvibaculum lavamentivorans DS-1]
          Length = 329

 Score =  358 bits (919), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 153/334 (45%), Positives = 220/334 (65%), Gaps = 5/334 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
               T +     + + +  A R+++ E  GL  L +SL G     F  AVE++    GRV
Sbjct: 1   MPRPTDQKIPDTRAAHLASAQRTLMLEIEGLKQLAASLDG----PFTEAVEQLGEATGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           ++TG+GKSGHI  K+A+TLASTGTP+ +VH  EASHGDLGMIT  D+I+ LSWSG + EL
Sbjct: 57  IVTGMGKSGHIARKIAATLASTGTPAHYVHPGEASHGDLGMITSGDVILALSWSGETAEL 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            +I+ +A+RF+IPL+A+T+E KS +   ADI L LP+  E+CP+ LAPTTS  MQLA+GD
Sbjct: 117 SSIISHAKRFAIPLVAMTAEAKSALGTAADIGLFLPRAEEACPNKLAPTTSTTMQLALGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALLE + FS  DF V HPGGKLG +    S+VMH+GD++PL     P+ + + ++S
Sbjct: 177 ALAMALLERKGFSARDFSVFHPGGKLGAMLRHVSEVMHTGDALPLAAPATPMSEVLLVMS 236

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           +K  GC  +VD   KL G+IT+GDI RN  + L   +  D+M ++PK +    L + A++
Sbjct: 237 QKSLGCAGIVDGAGKLVGVITDGDIRRNSGEGLLGRNASDIMNRSPKTVAPGLLASEAVK 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +L +  I+ L VV +  + +G+VH  D L+ G+I
Sbjct: 297 ILNEKKITSLFVV-EDGRPVGLVHIHDFLKAGVI 329


>gi|50119253|ref|YP_048420.1| D-arabinose 5-phosphate isomerase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49609779|emb|CAG73213.1| conserved hypothetical protein [Pectobacterium atrosepticum
           SCRI1043]
          Length = 357

 Score =  358 bits (918), Expect = 8e-97,   Method: Composition-based stats.
 Identities = 136/336 (40%), Positives = 200/336 (59%), Gaps = 9/336 (2%)

Query: 10  SVTRKGHSLMKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
              +K H L  +   Q A  + +  E+ GL+ L+  +       F  A + I   KG+VV
Sbjct: 27  HTRQKTHELPAHFDFQQAGKQVLSIERDGLAQLDQYI----DDNFTLACKNIFHCKGKVV 82

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S SG S E+ 
Sbjct: 83  VMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNSGESHEIL 142

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS    L +GDA
Sbjct: 143 SLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTATLVMGDA 202

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           LA+ALL++R F+  DF + HPGG LG    +  SD+MHSGD IP V     L DA+  ++
Sbjct: 203 LAVALLQARGFTAEDFALSHPGGALGRKLLLRVSDIMHSGDEIPHVPHDASLRDALVEIT 262

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K  G   + +   K++GI T+GD+ R F    DLN+  + DVM      +   TL   A
Sbjct: 263 RKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAPQTLAVDA 322

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 323 LNLMQSRHITSVLVAEND-RLVGIVHMHDMLRAGVV 357


>gi|77457089|ref|YP_346594.1| KpsF/GutQ [Pseudomonas fluorescens Pf0-1]
 gi|77381092|gb|ABA72605.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens Pf0-1]
          Length = 324

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 203/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   +  +    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   TSDLIQSAQRTIRLEVEAVQGLLPHIDAD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITRDDVILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T   +S +A  A++ L +  E E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 QLISVTGNPQSPLAKAAEVNLNVHVEHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMH+G  +P V+ G  L DA+  ++ K  G   +++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHAGQELPQVQRGTLLKDALMEMTRKGLGMTVILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R   +  D+++ +++ VM  + K    + L   A++++  H I+ 
Sbjct: 240 ADGKLAGIFTDGDLRRTLDRSIDIHSATIDQVMTVHGKTARAEMLAAEALKIMEDHRINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD+  + IG  +  DLLR G++
Sbjct: 300 LVVVDEEDRPIGAFNLSDLLRAGVM 324


>gi|300705233|ref|YP_003746836.1| arabinose-5-phosphate isomerase [Ralstonia solanacearum CFBP2957]
 gi|299072897|emb|CBJ44253.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum CFBP2957]
          Length = 327

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 139/328 (42%), Positives = 195/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+S    ++S  F  AVE +    GRVV++GIGKSG
Sbjct: 4   NFNPDRALALAQQTFDIEAQAVLGLKS----QVSADFARAVEMVLRCTGRVVVSGIGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL AIL   +R
Sbjct: 60  HIARKVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLIKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +A HAD+VL    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 120 LGAKLIAVTGNPQSSLAQHADVVLNSRVEVEACPLNLAPTASTTAQMALGDALAVALLDA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F  +DF   HPGG LG        DVM  G+++P V    PL  A+  ++ K     A
Sbjct: 180 RGFGADDFARSHPGGSLGRKLLTHVRDVMRQGEAVPRVAEDTPLSQALMEITRKGMAMTA 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +  G+ T+GD+ R     +D   + + +VM +NP+ +  D L   A++++  H 
Sbjct: 240 VVDAEGRAAGVFTDGDLRRLLETPRDWRAVPIHEVMHRNPRAVGPDQLAVEAVEMMETHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD   + IG +H  DL R  +I
Sbjct: 300 INQLLVVDAAGQLIGALHIHDLTRAKVI 327


>gi|238896704|ref|YP_002921449.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238549031|dbj|BAH65382.1| putative isomerase [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 328

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ +++   +R  + LI I
Sbjct: 70  TFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILSLIPVLKRQQVKLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V +   L DA+  ++ K  G  A+ D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V D
Sbjct: 250 IGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  DLLR G++
Sbjct: 310 GD-HLLGVVHMHDLLRAGVV 328


>gi|323979086|gb|EGB74164.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
          Length = 328

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERDCLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|26249783|ref|NP_755823.1| D-arabinose 5-phosphate isomerase [Escherichia coli CFT073]
 gi|26110211|gb|AAN82397.1|AE016767_157 Hypothetical protein yrbH [Escherichia coli CFT073]
          Length = 335

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 21  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 77  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGCPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 197 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 257 EGIFTDGDLRRVFDMGVDVRRLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 317 GD-HLLGVLHMHDLLRAGVV 335


>gi|317046701|ref|YP_004114349.1| KpsF/GutQ family protein [Pantoea sp. At-9b]
 gi|316948318|gb|ADU67793.1| KpsF/GutQ family protein [Pantoea sp. At-9b]
          Length = 326

 Score =  358 bits (918), Expect = 9e-97,   Method: Composition-based stats.
 Identities = 138/330 (41%), Positives = 202/330 (61%), Gaps = 8/330 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
            H  +     Q     +  E+ GL  L+  +  +    F  A E I A +G+VV+ G+GK
Sbjct: 2   SHQRLDFDFQQAGKAVLRIEREGLEQLDQYINDD----FSRACEMIFACRGKVVVMGMGK 57

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGHIG K+A+T ASTGTP+FFVH AEASHGDLGM++ DD+++ +S SG S+E+ A++   
Sbjct: 58  SGHIGKKMAATFASTGTPAFFVHPAEASHGDLGMVSTDDVVVAISNSGESNEILALIPVL 117

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +R  + LI ITS   S +   AD+ L +    E+CP GLAPTTS    L +GDALA+ALL
Sbjct: 118 KRQKVQLICITSRADSAMGRAADVHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALL 177

Query: 195 ESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           E+R F++ DF + HPGG LG    +  SD+MHSGD IP V     L DA+  ++ K  G 
Sbjct: 178 EARGFTQEDFALSHPGGALGRKLLLHVSDIMHSGDEIPHVSRDASLRDALLEITRKNLGL 237

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
             +VD+  K++GI T+GD+ R F    D  + S++DVM +    +  + L   A+ L++ 
Sbjct: 238 TVIVDDLMKIEGIFTDGDLRRVFDMGIDFQSASIKDVMTRGGIRVRPNMLAVDALNLMQN 297

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            NI+ L+V DD  + +G++H  D+LR G++
Sbjct: 298 KNITALLVADDD-RLLGVIHMHDMLRAGVV 326


>gi|16131087|ref|NP_417664.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|74313734|ref|YP_312153.1| D-arabinose 5-phosphate isomerase [Shigella sonnei Ss046]
 gi|82545565|ref|YP_409512.1| D-arabinose 5-phosphate isomerase [Shigella boydii Sb227]
 gi|89109960|ref|AP_003740.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. W3110]
 gi|110643438|ref|YP_671168.1| D-arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|117625489|ref|YP_858812.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|157158811|ref|YP_001464675.1| D-arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|157162681|ref|YP_001459999.1| D-arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|170018553|ref|YP_001723507.1| D-arabinose 5-phosphate isomerase [Escherichia coli ATCC 8739]
 gi|170082731|ref|YP_001732051.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170679857|ref|YP_001745469.1| D-arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|187731792|ref|YP_001881888.1| D-arabinose 5-phosphate isomerase [Shigella boydii CDC 3083-94]
 gi|188494442|ref|ZP_03001712.1| arabinose 5-phosphate isomerase [Escherichia coli 53638]
 gi|191168645|ref|ZP_03030427.1| arabinose 5-phosphate isomerase [Escherichia coli B7A]
 gi|191174489|ref|ZP_03035989.1| arabinose 5-phosphate isomerase [Escherichia coli F11]
 gi|193065347|ref|ZP_03046418.1| arabinose 5-phosphate isomerase [Escherichia coli E22]
 gi|193070323|ref|ZP_03051266.1| arabinose 5-phosphate isomerase [Escherichia coli E110019]
 gi|194429127|ref|ZP_03061657.1| arabinose 5-phosphate isomerase [Escherichia coli B171]
 gi|194439202|ref|ZP_03071283.1| arabinose 5-phosphate isomerase [Escherichia coli 101-1]
 gi|209920672|ref|YP_002294756.1| D-arabinose 5-phosphate isomerase [Escherichia coli SE11]
 gi|215488513|ref|YP_002330944.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218555767|ref|YP_002388680.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218560267|ref|YP_002393180.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218691487|ref|YP_002399699.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|218696902|ref|YP_002404569.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218701966|ref|YP_002409595.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|238902299|ref|YP_002928095.1| D-arabinose 5-phosphate isomerase [Escherichia coli BW2952]
 gi|253771969|ref|YP_003034800.1| D-arabinose 5-phosphate isomerase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254163139|ref|YP_003046247.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|256018884|ref|ZP_05432749.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|256024228|ref|ZP_05438093.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 4_1_40B]
 gi|260857324|ref|YP_003231215.1| D-arabinose 5-phosphate isomerase [Escherichia coli O26:H11 str.
           11368]
 gi|260869948|ref|YP_003236350.1| D-arabinose 5-phosphate isomerase [Escherichia coli O111:H- str.
           11128]
 gi|291284571|ref|YP_003501389.1| Arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293412568|ref|ZP_06655291.1| conserved hypothetical protein [Escherichia coli B354]
 gi|293416626|ref|ZP_06659265.1| D-arabinose 5-phosphate isomerase [Escherichia coli B185]
 gi|293449530|ref|ZP_06663951.1| D-arabinose 5-phosphate isomerase [Escherichia coli B088]
 gi|300817548|ref|ZP_07097764.1| arabinose 5-phosphate isomerase [Escherichia coli MS 107-1]
 gi|300823837|ref|ZP_07103961.1| arabinose 5-phosphate isomerase [Escherichia coli MS 119-7]
 gi|300904389|ref|ZP_07122237.1| arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300926058|ref|ZP_07141880.1| arabinose 5-phosphate isomerase [Escherichia coli MS 182-1]
 gi|300929893|ref|ZP_07145335.1| arabinose 5-phosphate isomerase [Escherichia coli MS 187-1]
 gi|300938113|ref|ZP_07152887.1| arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300948852|ref|ZP_07162917.1| arabinose 5-phosphate isomerase [Escherichia coli MS 116-1]
 gi|300955786|ref|ZP_07168128.1| arabinose 5-phosphate isomerase [Escherichia coli MS 175-1]
 gi|300979954|ref|ZP_07174806.1| arabinose 5-phosphate isomerase [Escherichia coli MS 200-1]
 gi|301022099|ref|ZP_07186025.1| arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|301025901|ref|ZP_07189388.1| arabinose 5-phosphate isomerase [Escherichia coli MS 196-1]
 gi|301306743|ref|ZP_07212797.1| arabinose 5-phosphate isomerase [Escherichia coli MS 124-1]
 gi|301326370|ref|ZP_07219734.1| arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|301644911|ref|ZP_07244880.1| arabinose 5-phosphate isomerase [Escherichia coli MS 146-1]
 gi|306816461|ref|ZP_07450593.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|307139883|ref|ZP_07499239.1| D-arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|307313098|ref|ZP_07592724.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|309793776|ref|ZP_07688202.1| arabinose 5-phosphate isomerase [Escherichia coli MS 145-7]
 gi|312968464|ref|ZP_07782673.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|312972529|ref|ZP_07786703.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|331643895|ref|ZP_08345026.1| arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331654801|ref|ZP_08355801.1| arabinose 5-phosphate isomerase [Escherichia coli M718]
 gi|331659484|ref|ZP_08360426.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331664810|ref|ZP_08365715.1| arabinose 5-phosphate isomerase [Escherichia coli TA143]
 gi|331670024|ref|ZP_08370869.1| arabinose 5-phosphate isomerase [Escherichia coli TA271]
 gi|331674726|ref|ZP_08375485.1| arabinose 5-phosphate isomerase [Escherichia coli TA280]
 gi|331679276|ref|ZP_08379948.1| arabinose 5-phosphate isomerase [Escherichia coli H591]
 gi|1176842|sp|P45395|KDSD_ECOLI RecName: Full=Arabinose 5-phosphate isomerase
 gi|606135|gb|AAA57998.1| ORF_o328 [Escherichia coli str. K-12 substr. MG1655]
 gi|1789588|gb|AAC76229.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|73857211|gb|AAZ89918.1| putative isomerase [Shigella sonnei Ss046]
 gi|81246976|gb|ABB67684.1| putative isomerase [Shigella boydii Sb227]
 gi|85675991|dbj|BAE77241.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K12
           substr. W3110]
 gi|110345030|gb|ABG71267.1| arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|115514613|gb|ABJ02688.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|157068361|gb|ABV07616.1| arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|157080841|gb|ABV20549.1| arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|169753481|gb|ACA76180.1| KpsF/GutQ family protein [Escherichia coli ATCC 8739]
 gi|169890566|gb|ACB04273.1| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517575|gb|ACB15753.1| arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|187428784|gb|ACD08058.1| arabinose 5-phosphate isomerase [Shigella boydii CDC 3083-94]
 gi|188489641|gb|EDU64744.1| arabinose 5-phosphate isomerase [Escherichia coli 53638]
 gi|190901339|gb|EDV61106.1| arabinose 5-phosphate isomerase [Escherichia coli B7A]
 gi|190905244|gb|EDV64883.1| arabinose 5-phosphate isomerase [Escherichia coli F11]
 gi|192926988|gb|EDV81611.1| arabinose 5-phosphate isomerase [Escherichia coli E22]
 gi|192956382|gb|EDV86842.1| arabinose 5-phosphate isomerase [Escherichia coli E110019]
 gi|194412852|gb|EDX29144.1| arabinose 5-phosphate isomerase [Escherichia coli B171]
 gi|194421898|gb|EDX37904.1| arabinose 5-phosphate isomerase [Escherichia coli 101-1]
 gi|209758068|gb|ACI77346.1| putative isomerase [Escherichia coli]
 gi|209758074|gb|ACI77349.1| putative isomerase [Escherichia coli]
 gi|209913931|dbj|BAG79005.1| putative isomerase [Escherichia coli SE11]
 gi|215266585|emb|CAS11024.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|218353634|emb|CAU99843.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218362535|emb|CAR00159.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218367036|emb|CAR04807.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218371952|emb|CAR19808.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|218429051|emb|CAR09858.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|222034914|emb|CAP77657.1| Arabinose 5-phosphate isomerase [Escherichia coli LF82]
 gi|238860738|gb|ACR62736.1| D-arabinose 5-phosphate isomerase [Escherichia coli BW2952]
 gi|242378740|emb|CAQ33530.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|253323013|gb|ACT27615.1| KpsF/GutQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253975040|gb|ACT40711.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|253979196|gb|ACT44866.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|257755973|dbj|BAI27475.1| D-arabinose 5-phosphate isomerase [Escherichia coli O26:H11 str.
           11368]
 gi|257766304|dbj|BAI37799.1| D-arabinose 5-phosphate isomerase [Escherichia coli O111:H- str.
           11128]
 gi|260447776|gb|ACX38198.1| KpsF/GutQ family protein [Escherichia coli DH1]
 gi|262176881|gb|ACY27495.1| D-arabinose 5-phosphate isomerase [Escherichia coli LW1655F+]
 gi|281180239|dbj|BAI56569.1| putative isomerase [Escherichia coli SE15]
 gi|290764444|gb|ADD58405.1| Arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322620|gb|EFE62049.1| D-arabinose 5-phosphate isomerase [Escherichia coli B088]
 gi|291431982|gb|EFF04965.1| D-arabinose 5-phosphate isomerase [Escherichia coli B185]
 gi|291469339|gb|EFF11830.1| conserved hypothetical protein [Escherichia coli B354]
 gi|294493378|gb|ADE92134.1| arabinose 5-phosphate isomerase [Escherichia coli IHE3034]
 gi|299879923|gb|EFI88134.1| arabinose 5-phosphate isomerase [Escherichia coli MS 196-1]
 gi|300307889|gb|EFJ62409.1| arabinose 5-phosphate isomerase [Escherichia coli MS 200-1]
 gi|300317332|gb|EFJ67116.1| arabinose 5-phosphate isomerase [Escherichia coli MS 175-1]
 gi|300397695|gb|EFJ81233.1| arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|300403663|gb|EFJ87201.1| arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300417916|gb|EFK01227.1| arabinose 5-phosphate isomerase [Escherichia coli MS 182-1]
 gi|300451657|gb|EFK15277.1| arabinose 5-phosphate isomerase [Escherichia coli MS 116-1]
 gi|300456876|gb|EFK20369.1| arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300462179|gb|EFK25672.1| arabinose 5-phosphate isomerase [Escherichia coli MS 187-1]
 gi|300523605|gb|EFK44674.1| arabinose 5-phosphate isomerase [Escherichia coli MS 119-7]
 gi|300529846|gb|EFK50908.1| arabinose 5-phosphate isomerase [Escherichia coli MS 107-1]
 gi|300838022|gb|EFK65782.1| arabinose 5-phosphate isomerase [Escherichia coli MS 124-1]
 gi|300846934|gb|EFK74694.1| arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|301076762|gb|EFK91568.1| arabinose 5-phosphate isomerase [Escherichia coli MS 146-1]
 gi|305850026|gb|EFM50485.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|306907009|gb|EFN37517.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|307625204|gb|ADN69508.1| D-arabinose 5-phosphate isomerase [Escherichia coli UM146]
 gi|308122733|gb|EFO59995.1| arabinose 5-phosphate isomerase [Escherichia coli MS 145-7]
 gi|309703623|emb|CBJ02963.1| arabinose 5-phosphate isomerase [Escherichia coli ETEC H10407]
 gi|310334906|gb|EFQ01111.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|312286682|gb|EFR14593.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|312947754|gb|ADR28581.1| D-arabinose 5-phosphate isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315062503|gb|ADT76830.1| D-arabinose 5-phosphate isomerase [Escherichia coli W]
 gi|315137783|dbj|BAJ44942.1| arabinose 5-phosphate isomerase [Escherichia coli DH1]
 gi|315257125|gb|EFU37093.1| arabinose 5-phosphate isomerase [Escherichia coli MS 85-1]
 gi|315289004|gb|EFU48402.1| arabinose 5-phosphate isomerase [Escherichia coli MS 110-3]
 gi|315297937|gb|EFU57207.1| arabinose 5-phosphate isomerase [Escherichia coli MS 16-3]
 gi|315617280|gb|EFU97889.1| arabinose 5-phosphate isomerase [Escherichia coli 3431]
 gi|320186683|gb|EFW61407.1| Arabinose 5-phosphate isomerase [Shigella flexneri CDC 796-83]
 gi|320194682|gb|EFW69312.1| Arabinose 5-phosphate isomerase [Escherichia coli WV_060327]
 gi|320202111|gb|EFW76686.1| Arabinose 5-phosphate isomerase [Escherichia coli EC4100B]
 gi|320640268|gb|EFX09840.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645565|gb|EFX14574.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str.
           493-89]
 gi|320650875|gb|EFX19332.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str. H
           2687]
 gi|320656256|gb|EFX24168.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320661946|gb|EFX29354.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320666781|gb|EFX33760.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323154412|gb|EFZ40613.1| arabinose 5-phosphate isomerase [Escherichia coli EPECa14]
 gi|323162889|gb|EFZ48724.1| arabinose 5-phosphate isomerase [Escherichia coli E128010]
 gi|323165158|gb|EFZ50948.1| arabinose 5-phosphate isomerase [Shigella sonnei 53G]
 gi|323173543|gb|EFZ59172.1| arabinose 5-phosphate isomerase [Escherichia coli LT-68]
 gi|323178627|gb|EFZ64203.1| arabinose 5-phosphate isomerase [Escherichia coli 1180]
 gi|323183151|gb|EFZ68549.1| arabinose 5-phosphate isomerase [Escherichia coli 1357]
 gi|323189182|gb|EFZ74466.1| arabinose 5-phosphate isomerase [Escherichia coli RN587/1]
 gi|323376909|gb|ADX49177.1| KpsF/GutQ family protein [Escherichia coli KO11]
 gi|323936109|gb|EGB32403.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1520]
 gi|323941703|gb|EGB37882.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E482]
 gi|323946949|gb|EGB42965.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H120]
 gi|323951284|gb|EGB47159.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
 gi|323957656|gb|EGB53370.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
 gi|323961148|gb|EGB56762.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H489]
 gi|323966377|gb|EGB61811.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli M863]
 gi|323970240|gb|EGB65511.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
 gi|324008709|gb|EGB77928.1| arabinose 5-phosphate isomerase [Escherichia coli MS 57-2]
 gi|324012159|gb|EGB81378.1| arabinose 5-phosphate isomerase [Escherichia coli MS 60-1]
 gi|324018351|gb|EGB87570.1| arabinose 5-phosphate isomerase [Escherichia coli MS 117-3]
 gi|324119562|gb|EGC13444.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1167]
 gi|327251288|gb|EGE62977.1| arabinose 5-phosphate isomerase [Escherichia coli STEC_7v]
 gi|330909249|gb|EGH37763.1| arabinose 5-phosphate isomerase [Escherichia coli AA86]
 gi|331037366|gb|EGI09590.1| arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331048183|gb|EGI20260.1| arabinose 5-phosphate isomerase [Escherichia coli M718]
 gi|331054066|gb|EGI26095.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331058058|gb|EGI30040.1| arabinose 5-phosphate isomerase [Escherichia coli TA143]
 gi|331062937|gb|EGI34851.1| arabinose 5-phosphate isomerase [Escherichia coli TA271]
 gi|331068165|gb|EGI39561.1| arabinose 5-phosphate isomerase [Escherichia coli TA280]
 gi|331073341|gb|EGI44664.1| arabinose 5-phosphate isomerase [Escherichia coli H591]
 gi|332090720|gb|EGI95814.1| arabinose 5-phosphate isomerase [Shigella boydii 3594-74]
 gi|332345154|gb|AEE58488.1| arabinose 5-phosphate isomerase [Escherichia coli UMNK88]
          Length = 328

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|304413070|ref|ZP_07394543.1| D-arabinose 5-phosphate isomerase [Candidatus Regiella insecticola
           LSR1]
 gi|304283913|gb|EFL92306.1| D-arabinose 5-phosphate isomerase [Candidatus Regiella insecticola
           LSR1]
          Length = 356

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 131/321 (40%), Positives = 192/321 (59%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +  +    F  A EKI   +G+VV+ GIGKSGHIG K+A+
Sbjct: 41  QAGKEVLQIERNALAQLDQYINHD----FSHACEKIFNCQGKVVVMGIGKSGHIGRKIAA 96

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FF+H  EASHGDLGM+T  D+++ +S SG + E+ +++   +R  I LIA+
Sbjct: 97  TFASTGTPAFFIHPTEASHGDLGMVTSQDIVLAISNSGETGEILSLIPILKRQKILLIAM 156

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +   KS +   ADI L +    E+CP GLAPT S    L +GDALA+ALL+ R F+   F
Sbjct: 157 SGNPKSNMGEVADIHLCIKVPEEACPLGLAPTASTTATLVMGDALAVALLKKRRFTPQHF 216

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    V   ++MH G  IP V +   L DA+  +++K+ G   + D+  K+
Sbjct: 217 ALSHPGGLLGRKLLVRVDEIMHIGTEIPQVTLDASLRDALLEITQKKLGLTVICDDQMKI 276

Query: 264 KGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            G+ T+GD+ R       DLN   + +VM      I  D L   A+ L++ HNI+VL+VV
Sbjct: 277 AGVFTDGDLRRVLSDNTFDLNNAKIAEVMTSGGIHISADKLAVEALNLMQSHNITVLLVV 336

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           +D  + +G+VH  DLL+ GI+
Sbjct: 337 EDE-RLLGVVHMHDLLKAGIV 356


>gi|261819640|ref|YP_003257746.1| D-arabinose 5-phosphate isomerase [Pectobacterium wasabiae WPP163]
 gi|261603653|gb|ACX86139.1| KpsF/GutQ family protein [Pectobacterium wasabiae WPP163]
          Length = 345

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 134/343 (39%), Positives = 202/343 (58%), Gaps = 12/343 (3%)

Query: 6   SHFKSVTRKGHSLMK----NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           +H K  + +  S  +        Q   + +  E+ GL+ L+  +       F  A +KI 
Sbjct: 8   AHLKQQSDRALSEHRLQPDFDFQQAGKQVLSIERDGLAQLDQYI----DDNFTLACKKIF 63

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +G+VV+ G+GKSGHIG K+A+T ASTGTP+FFVH  EASHGDLGM+T  D++I +S S
Sbjct: 64  NCQGKVVVMGMGKSGHIGCKIAATFASTGTPAFFVHPGEASHGDLGMVTPHDIVIAISNS 123

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G S E+ +++   +R  + LI +TS  +S +   ADI L +    E+CP GLAPTTS   
Sbjct: 124 GESHEILSLIPVLKRQKVFLICMTSAPESTMGKAADIHLCVHVPQEACPLGLAPTTSTTA 183

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLI 240
            L +GDALA+ALL++R F+  DF + HPGG LG    +  SD+MHSGD IP V     L 
Sbjct: 184 TLVMGDALAVALLQARGFTAEDFALSHPGGALGRKLLLRISDIMHSGDEIPHVSHDASLR 243

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILE 298
           DA+  ++ K  G   + +   K++GI T+GD+ R F    DLN+  + DVM      +  
Sbjct: 244 DALVEITRKNLGMTVICEADMKIQGIFTDGDLRRIFDMNIDLNSARIADVMTAGGIRVAP 303

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L   A+ L++  +I+ ++V ++  + +GIVH  D+LR G++
Sbjct: 304 NMLAVDALNLMQSRHITSVLVAEND-RLVGIVHMHDMLRAGVV 345


>gi|320174563|gb|EFW49699.1| Arabinose 5-phosphate isomerase [Shigella dysenteriae CDC 74-1112]
          Length = 328

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT++    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSTTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|331648997|ref|ZP_08350085.1| arabinose 5-phosphate isomerase [Escherichia coli M605]
 gi|331042744|gb|EGI14886.1| arabinose 5-phosphate isomerase [Escherichia coli M605]
          Length = 328

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPRDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|153208981|ref|ZP_01947187.1| arabinose-5-phosphate isomerase [Coxiella burnetii 'MSU Goat Q177']
 gi|165923986|ref|ZP_02219818.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 334]
 gi|212212785|ref|YP_002303721.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuG_Q212]
 gi|212219026|ref|YP_002305813.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuK_Q154]
 gi|120575581|gb|EAX32205.1| arabinose-5-phosphate isomerase [Coxiella burnetii 'MSU Goat Q177']
 gi|165916572|gb|EDR35176.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 334]
 gi|212011195|gb|ACJ18576.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuG_Q212]
 gi|212013288|gb|ACJ20668.1| arabinose-5-phosphate isomerase [Coxiella burnetii CbuK_Q154]
          Length = 324

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/315 (41%), Positives = 198/315 (62%), Gaps = 7/315 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E R + SL + +      +F  A   +   KGRVV+ G+GKSGHI  K+A+TLAST
Sbjct: 14  VIATELRAIQSLHARI----DEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLAST 69

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSF+VH +EASHGD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +
Sbjct: 70  GTPSFYVHPSEASHGDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQ 129

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  AD V+ +  E E+CP GLAPT+S    L +GDALAIALLE+R F+ +DF  +HP
Sbjct: 130 STLARIADTVIDVSVEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTADDFARIHP 189

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG    +  +D+MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T
Sbjct: 190 GGSLGRRLLLHIADLMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFT 249

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GD+ R   K  D++   +E VM KN   +    L   A+++++Q+ I+ L+VVD     
Sbjct: 250 DGDLRRTLDKGYDIHRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASP 309

Query: 327 IGIVHFLDLLRFGII 341
           +G++H  DLLR G+I
Sbjct: 310 VGVIHMHDLLRAGVI 324


>gi|296533343|ref|ZP_06895946.1| arabinose 5-phosphate isomerase [Roseomonas cervicalis ATCC 49957]
 gi|296266333|gb|EFH12355.1| arabinose 5-phosphate isomerase [Roseomonas cervicalis ATCC 49957]
          Length = 329

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 151/319 (47%), Positives = 208/319 (65%), Gaps = 2/319 (0%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA-IKGRVVITGIGKSGHIGSK 81
           ++  A  ++  E +GL +L  +L+  L+     A++ I+    GRV++TG+GKSGH+G K
Sbjct: 11  SLDAARNTLDLEIQGLQALRGALEEGLAEPLARAIQAIRDTANGRVILTGMGKSGHVGRK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP++FVH  EASHGDLGMI  +D+++ LSWSG + EL  I+ Y RRF + L
Sbjct: 71  IAATLASTGTPAYFVHPGEASHGDLGMIRSEDVVLALSWSGEAPELSDIVAYTRRFDVTL 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT+   S +A  ADI L LP  PE+CP+GLAPTTS  MQ+A+GDALA+ALL  R FS 
Sbjct: 131 IAITARQGSSLASAADIALILPAMPEACPNGLAPTTSTTMQMALGDALAVALLSQRGFSA 190

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGGKLG     A ++MH G ++P+V     L  AI  ++ KRFG  AVVDE  
Sbjct: 191 KDFRQFHPGGKLGAQLRRARELMHDGTAVPMVPQTASLSQAIVEMTGKRFGVTAVVDEAG 250

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L G +T+GD+ R+F        V +VM + P+ I  D L   A+ L+  H I+ L VV+
Sbjct: 251 RLVGAVTDGDVRRSFEGAFVDRPVREVMNREPRTIPPDMLAQEALALMNAHRITSLFVVE 310

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           + Q+  GI+H  DLLR G+
Sbjct: 311 E-QRPSGILHMHDLLRAGV 328


>gi|83313032|ref|YP_423296.1| phosphosugar isomerase [Magnetospirillum magneticum AMB-1]
 gi|82947873|dbj|BAE52737.1| Hypothetical phosphosugar isomerase AQ_1546 [Magnetospirillum
           magneticum AMB-1]
          Length = 321

 Score =  358 bits (918), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 142/320 (44%), Positives = 203/320 (63%), Gaps = 4/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A R +  E R L SL +SL G     F  AV  I+   GRV++TG+GKSGH+  
Sbjct: 5   SDALAIARRVLDTEARALDSLAASLDG----PFLQAVTLIERAPGRVIVTGMGKSGHVAR 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ASTG P+F+VH AEASHGDLGM+TRDD ++ LS SG + EL  I+ Y RRF I 
Sbjct: 61  KIAATMASTGCPAFYVHPAEASHGDLGMVTRDDAVVALSNSGETPELGDIIAYTRRFEIG 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ITS + S +A  +D+ L LP  PE+CP GLAPTTS  M LA+GDALA+ LLE + F+
Sbjct: 121 LIGITSRHGSTLATASDVALVLPANPEACPMGLAPTTSTTMMLALGDALAVTLLERKGFT 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGG+LG   +  +D+MH GD +PLV     + + + +++ K  GC  VV   
Sbjct: 181 AADFKVFHPGGQLGQRLLKVADLMHGGDGLPLVGAEAKMAEVLLVMTAKSLGCAGVVTPD 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GD+ R+   DL T    +VM  +P+ +  + L   A++ + + +I+ L VV
Sbjct: 241 GRLAGILTDGDLRRHMSPDLLTAKAAEVMTASPRTVPPNLLAAEALRQMNERSITSLFVV 300

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +   + +G++H  D LR G+
Sbjct: 301 EGDGRPVGVLHVHDCLRAGL 320


>gi|30064535|ref|NP_838706.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|56480283|ref|NP_708996.2| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 301]
 gi|37079424|sp|Q83JF4|KDSD_SHIFL RecName: Full=Arabinose 5-phosphate isomerase
 gi|30042794|gb|AAP18517.1| putative isomerase [Shigella flexneri 2a str. 2457T]
 gi|56383834|gb|AAN44703.2| putative isomerase [Shigella flexneri 2a str. 301]
 gi|313648560|gb|EFS13002.1| arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|332752356|gb|EGJ82746.1| arabinose 5-phosphate isomerase [Shigella flexneri 4343-70]
 gi|332752882|gb|EGJ83267.1| arabinose 5-phosphate isomerase [Shigella flexneri K-671]
 gi|332754544|gb|EGJ84910.1| arabinose 5-phosphate isomerase [Shigella flexneri 2747-71]
 gi|332765193|gb|EGJ95420.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Shigella flexneri 2930-71]
 gi|332998839|gb|EGK18435.1| arabinose 5-phosphate isomerase [Shigella flexneri VA-6]
 gi|332999276|gb|EGK18862.1| arabinose 5-phosphate isomerase [Shigella flexneri K-272]
 gi|332999920|gb|EGK19503.1| arabinose 5-phosphate isomerase [Shigella flexneri K-218]
 gi|333014642|gb|EGK33989.1| arabinose 5-phosphate isomerase [Shigella flexneri K-304]
 gi|333015000|gb|EGK34344.1| arabinose 5-phosphate isomerase [Shigella flexneri K-227]
          Length = 328

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH +EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPSEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|188025683|ref|ZP_02959448.2| hypothetical protein PROSTU_01304 [Providencia stuartii ATCC 25827]
 gi|188022727|gb|EDU60767.1| hypothetical protein PROSTU_01304 [Providencia stuartii ATCC 25827]
          Length = 326

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E  GL +LE  +  +    F  A ++I A +G+VV+ G+GKSGHIG K+A+
Sbjct: 12  QVGKEVLHIESEGLKNLEQYINDD----FTHACQRIFACQGKVVVMGMGKSGHIGRKIAA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R  +PLI +
Sbjct: 68  TLASTGTPSFFVHPGEASHGDLGMITNKDIVLAISNSGESSEILALLPVLKRIKVPLICM 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +  +ADI L +    E+CP GLAPTTS    L +GDALAIALL +R F+  DF
Sbjct: 128 TNNPNSSMGKYADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLTARGFTPEDF 187

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+M+ GD IP +     L +A+  ++ K+ G   + D+   +
Sbjct: 188 ALSHPGGALGRKLLLLVRDLMNVGDDIPHIPQTATLREALIEITRKKLGMTVICDDEMNI 247

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    DLN   + DVM +    + ++ L   A+ L++  +I+ LMV  
Sbjct: 248 AGIFTDGDLRRIFDMGIDLNNAKIADVMTRGGIRVSQNMLAVEALNLMQSKHITSLMVA- 306

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K +G++H  DLL+ G++
Sbjct: 307 EGNKLVGVLHMHDLLQAGVV 326


>gi|241661914|ref|YP_002980274.1| KpsF/GutQ family protein [Ralstonia pickettii 12D]
 gi|240863941|gb|ACS61602.1| KpsF/GutQ family protein [Ralstonia pickettii 12D]
          Length = 327

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 135/328 (41%), Positives = 193/328 (58%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+     ++S  F  AVE +    GRVV++G+GKSG
Sbjct: 4   NFNPDRALALAQQTFDIEAQAVLGLK----TQVSADFARAVEMVLGCTGRVVVSGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL  IL   +R
Sbjct: 60  HVARKIAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELNVILPLVKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +  HAD+VL    + E+CP  LAPT S   Q+A+GDALA+A+L++
Sbjct: 120 LGAKLIAVTGNPESSLGKHADVVLNSHVDVEACPLNLAPTASTTAQIALGDALAVAVLDA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F   DF   HPGG LG        DVM +GD+IP V    PL  A+  ++ K     A
Sbjct: 180 RGFGAEDFARSHPGGSLGRKLLTHVRDVMRAGDAIPRVNEDTPLSQALMEITRKGMAMTA 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD G +  G+ T+GD+ R     +D  T+ + +VM +NP+ +  D L   A++++  H 
Sbjct: 240 VVDAGGRAVGVFTDGDLRRLLETPRDWRTVPIHEVMHRNPRSVGPDQLAVEAVEVMETHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD     +G +H  DL R  +I
Sbjct: 300 INQLLVVDAAGLLVGALHIHDLTRAKVI 327


>gi|332163082|ref|YP_004299659.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604038|emb|CBY25536.1| arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica Y11]
 gi|325667312|gb|ADZ43956.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862756|emb|CBX72898.1| arabinose 5-phosphate isomerase [Yersinia enterocolitica W22703]
          Length = 328

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKQVLQIEREGLAQLDQYINDD----FAQACEAIFNCHGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 70  TFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALIPVLKRQKIQLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 250 KGIFTDGDLRRVFDMGIDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|218550480|ref|YP_002384271.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|218358021|emb|CAQ90667.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|324115199|gb|EGC09163.1| KpsF/GutQ family protein sugar isomerase [Escherichia fergusonii
           B253]
          Length = 328

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +       F  A EK+    G+V++ G+GKSGHIG K+A+
Sbjct: 14  KAGKEVLAIEREGLADLDQYIDQ----NFTLACEKLFWCTGKVIVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTSQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPDSSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVTKNASLRDALLEITRKNLGMTVICDDNMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVEALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|332086228|gb|EGI91386.1| arabinose 5-phosphate isomerase [Shigella boydii 5216-82]
          Length = 328

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GD+LA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDSLAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 KGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|85715895|ref|ZP_01046873.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter sp. Nb-311A]
 gi|85697302|gb|EAQ35182.1| Sugar isomerase, KpsF/GutQ family protein [Nitrobacter sp. Nb-311A]
          Length = 325

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 166/320 (51%), Positives = 226/320 (70%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ ++ ALR+  AE  G+S+L ++L+ +L   F  A + I+  KGR+++TG+GKSGHIG 
Sbjct: 6   NAAIESALRTFEAEAGGVSALAAALKSDLGSAFAVATDLIRNAKGRLIVTGLGKSGHIGR 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ LSWSG   E+K ++ YA+RF IP
Sbjct: 66  KIAATFASTGTPAFFVHAAEASHGDLGMITPDDVIMALSWSGEQPEMKNLITYAKRFRIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+E  S +   AD+VLTLPK  E+CPH LAPTTS +M LA+GDALA+ALLE R F+
Sbjct: 126 LIAMTAERDSTLGSAADLVLTLPKAREACPHNLAPTTSTLMLLALGDALAVALLEGRGFT 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF +LHPGGKLG +     D+MH GD++P+  +G  +  AI  ++ K FGCVA+VD+ 
Sbjct: 186 STDFSMLHPGGKLGAMLKQTRDIMHKGDALPVALLGTLMSQAIAEMTAKTFGCVAIVDDN 245

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GIIT+GD+ R    DL +L VEDVM + P  +  D L+   + LL     + L+V 
Sbjct: 246 GTLAGIITDGDLRRRMSPDLLSLKVEDVMTRTPITVRPDQLVGEVLDLLNTTKKTQLLVA 305

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  K +G++HF DLLR G+
Sbjct: 306 DN-NKLVGVIHFHDLLRAGV 324


>gi|39996991|ref|NP_952942.1| carbohydrate isomerase KpsF/GutQ family protein [Geobacter
           sulfurreducens PCA]
 gi|39983879|gb|AAR35269.1| carbohydrate isomerase, KpsF/GutQ family [Geobacter sulfurreducens
           PCA]
 gi|298506008|gb|ADI84731.1| arabinose-5-phosphate isomerase [Geobacter sulfurreducens KN400]
          Length = 321

 Score =  357 bits (917), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 192/323 (59%), Gaps = 9/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A + I  E   L+ L  ++ GE    F  AV  I   +GRVV+TG+GKSG IG K+
Sbjct: 2   ILEEARKVIRIEAEALTRLADTIDGE----FEKAVRLILGTRGRVVVTGMGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+ F+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    L+
Sbjct: 58  ASTMASTGTPALFLHPAEGVHGDLGMIMKGDVVIAISNSGETEEVVRILPIIKRLGATLV 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           +++    S +A   D+ L +    E+CP GLAPT S    LA+GDALA+ALL  R F   
Sbjct: 118 SMSGNPSSTLAKAGDVFLDISVTEEACPLGLAPTASTTATLAMGDALAVALLIERGFRPE 177

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG    +   D+MHSGD++PLV    P+ DA+ +++ K  G   V  E  
Sbjct: 178 DFALFHPGGSLGKKLLLTVGDLMHSGDAVPLVGSATPIRDALFVITAKGLGITGVCAEDG 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G++T+GD+ R+  K  D+      ++M +NPK I    L   A+Q++  H+I+ L V
Sbjct: 238 ALVGVVTDGDLRRSLGKGVDILNQPAGEIMTRNPKRINRSELAAKALQVMESHSITSLFV 297

Query: 320 VDD--CQKAIGIVHFLDLLRFGI 340
            DD    + +G++H  DLLR G+
Sbjct: 298 FDDTADNRPVGVIHLHDLLRAGL 320


>gi|251791368|ref|YP_003006089.1| D-arabinose 5-phosphate isomerase [Dickeya zeae Ech1591]
 gi|247539989|gb|ACT08610.1| KpsF/GutQ family protein [Dickeya zeae Ech1591]
          Length = 328

 Score =  357 bits (916), Expect = 1e-96,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 194/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              + +  E+  L+ L+  +       F  A EK+   +G+VV+ G+GKSGHIG K+A+T
Sbjct: 15  AGRQVLSIERDSLAQLDQYI----DDNFSQACEKMFYCRGKVVVMGMGKSGHIGCKMAAT 70

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI +T
Sbjct: 71  FASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLICMT 130

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 131 GNPESTMAKAADIHLCVHVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDFA 190

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   +  +  +++
Sbjct: 191 LSHPGGALGRKLLLRISDIMHTGDEIPRVSRDASLRDALLEITRKNLGMTVICGQDDRIE 250

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R F    +LN+  + DVM +    +   TL   A+ L++  +I+ L+V ++
Sbjct: 251 GIFTDGDLRRVFDMNINLNSAGIADVMTRGGIRVTPHTLAVDALNLMQSRHITSLLVAEN 310

Query: 323 CQKAIGIVHFLDLLRFGII 341
             + +GIVH  D+LR G++
Sbjct: 311 D-RLLGIVHMHDMLRAGVV 328


>gi|284923219|emb|CBG36313.1| arabinose 5-phosphate isomerase [Escherichia coli 042]
          Length = 328

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+++
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMSA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|161506122|ref|YP_001573234.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867469|gb|ABX24092.1| hypothetical protein SARI_04310 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 328

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----NFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRMHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKQASLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|312959002|ref|ZP_07773521.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens WH6]
 gi|311286772|gb|EFQ65334.1| arabinose 5-phosphate isomerase [Pseudomonas fluorescens WH6]
          Length = 324

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 131/325 (40%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L + +  +    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLELEAVEGLLAHIDAD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT +FFVH AEASHGD+GMIT+DD+I+ LS SG+++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTAFFVHPAEASHGDMGMITKDDIILALSNSGTTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I+IT    S +A  A++ L +    E+CP  LAPT+S    L +GDAL++ALLE+R F
Sbjct: 120 QMISITGNPDSTLAKAAEVNLNVHVAHEACPLNLAPTSSTTAALVMGDALSVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD +P V+ G  L DA+  ++ K  G   +++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDELPHVQRGTLLKDALMEMTRKGLGMTVILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +L G+ T+GD+ R   +  D++T +++ VM  + K    + L   A++++  H I  
Sbjct: 240 ADGRLAGVFTDGDLRRTLDRTIDIHTATIDAVMTPHGKTARPEMLAAEALKIMEDHKIGA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD+    +G ++  DLLR G++
Sbjct: 300 LVVVDNHDHPVGALNMHDLLRAGVM 324


>gi|291615983|ref|YP_003518725.1| KdsD [Pantoea ananatis LMG 20103]
 gi|291151013|gb|ADD75597.1| KdsD [Pantoea ananatis LMG 20103]
 gi|327396235|dbj|BAK13657.1| arabinose 5-phosphate isomerase KdsD [Pantoea ananatis AJ13355]
          Length = 328

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 197/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL  L+  +       F  A   I A +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKTVLRIEREGLEQLDQYIN----EAFADACALIYACQGKVVVMGMGKSGHIGKKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+ +DD++I +S SG S E+ A++   +R  IPLI +
Sbjct: 70  TFASTGTPAFFVHPAEASHGDLGMVGKDDVVIAISNSGESSEILALIPVMKRQKIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPTTS    L +GDALA++LLE+R F+  DF
Sbjct: 130 TSRPESAMARAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVSLLEARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD +P V     L DA+  ++ K  G   +VD+  K+
Sbjct: 190 ALSHPGGALGRKLLLHVSDIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D    ++ +VM +    +  + L   A+ L++  NI+ L+V D
Sbjct: 250 EGIFTDGDLRRIFDMGIDFQHATIAEVMTRGGIRVRPNVLAVDALNLMQTKNITSLLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  + +G+VH  D+LR G++
Sbjct: 310 DD-RLLGVVHMHDMLRAGVV 328


>gi|288956946|ref|YP_003447287.1| arabinose-5-phosphate isomerase [Azospirillum sp. B510]
 gi|288909254|dbj|BAI70743.1| arabinose-5-phosphate isomerase [Azospirillum sp. B510]
          Length = 338

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 151/330 (45%), Positives = 206/330 (62%), Gaps = 5/330 (1%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            V     S ++N  + CA+R +  E   L +L  SL GE    F  A++ ++ I+GRVV+
Sbjct: 12  PVASTESSPVENRDLACAVRVLRTEADALVALAGSLDGE----FLRALDILQGIEGRVVV 67

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GKSGH+  K+A+T+ASTGTP+ FVH  EASHGDLGMI R D ++ LS SG + EL  
Sbjct: 68  TGMGKSGHVARKIAATMASTGTPALFVHPGEASHGDLGMIARIDAVVALSNSGETHELAD 127

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+ Y RRF IPLI +T    S +A  +D+ L +P EPE+CP GLAPTTS  M LA+GDAL
Sbjct: 128 IIAYTRRFGIPLIGMTRRAASSLAEQSDVALVIPPEPEACPLGLAPTTSTTMMLALGDAL 187

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ALLE R FS  DF   HPGG+LG   +  +D+MH GD +PL ++  PL D I  ++ K
Sbjct: 188 AVALLERRGFSAADFREFHPGGQLGRALLKVTDIMHKGDDLPLCRLDSPLSDVIFEMTAK 247

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           R GCV V DE   L GIIT+GD+ R+   ++     + +M   PK I    L+  A++ +
Sbjct: 248 RLGCVGVTDEAGALVGIITDGDLRRHLKPEILAERADSIMSPRPKTIRPKALIVEALREM 307

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
               I+ L V++   + +GIVH  D LR G
Sbjct: 308 NDKKITTLFVIEAD-RPLGIVHIHDCLRAG 336


>gi|300692612|ref|YP_003753607.1| arabinose-5-phosphate isomerase [Ralstonia solanacearum PSI07]
 gi|299079672|emb|CBJ52349.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum PSI07]
          Length = 327

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/328 (42%), Positives = 194/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+S    ++S  F  AVE +    GRVV++GIGKSG
Sbjct: 4   NFNPDRALALAQQTFDIEAQAVLGLKS----QVSADFARAVEMVLRCTGRVVVSGIGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL AIL   +R
Sbjct: 60  HIARKVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLVKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +A HADIVL    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 120 LGAKLIAVTGNPQSSLAQHADIVLNSRVEVEACPLNLAPTASTTAQMALGDALAVALLDA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F  +DF   HPGG LG        DVM  GD++P V    PL  A+  ++ K     A
Sbjct: 180 RGFGADDFARSHPGGSLGRKLLTHVRDVMRQGDAVPRVTEDTPLSQALMEITRKGMAMTA 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +  G+ T+GD+ R     +D   + + +VM +NP+ +  D L   A++++  H 
Sbjct: 240 VVDAEGRAVGVFTDGDLRRLLETPRDWRAVPIHEVMHRNPRAVGPDQLAVEAVEVMETHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD   +  G +H  DL R  +I
Sbjct: 300 INQLLVVDAAGQLTGALHIHDLTRAKVI 327


>gi|332294923|ref|YP_004436846.1| KpsF/GutQ family protein [Thermodesulfobium narugense DSM 14796]
 gi|332178026|gb|AEE13715.1| KpsF/GutQ family protein [Thermodesulfobium narugense DSM 14796]
          Length = 323

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 134/327 (40%), Positives = 198/327 (60%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K   +  A      E+  +  L + +       F  A++ I   +GRV+ITG+GKSG 
Sbjct: 1   MNKEDILSLAKEVCFIERESVEQLCNKIDK----PFLDAIDLILGCEGRVIITGMGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TL+STGTPS F+H AE  HGDLGM+T  DL+I +S+SG + EL  IL   +R 
Sbjct: 57  IGRKIAATLSSTGTPSLFLHPAEGIHGDLGMVTGKDLVIAISYSGENTELITILPVLKRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + +IA+T    S ++  ADIVL +  + E+CP+ + PT+S  + L +GDA+AI LL+ R
Sbjct: 117 GVKVIAMTGNLSSTLSTFADIVLDIGVKKEACPYNIVPTSSTTVTLVLGDAIAICLLKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NF   DF + HPGG LG        D+MH G+  P+V +   + +A+  +S+K  G V+V
Sbjct: 177 NFRPQDFALFHPGGALGRSLITRVCDLMHKGEENPVVSLETIVREALFEISKKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD+   LKGIIT+GDI R    D        E+VM KNP  I E+ L T A+++L+   I
Sbjct: 237 VDKNGILKGIITDGDIRRKIEIDDMFLKRRAEEVMTKNPIYIYENRLATEALKILQDRKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++L VVD+  K +G++H  D+L+ GI+
Sbjct: 297 NLLPVVDEKLKVVGMIHLHDILKAGIV 323


>gi|225628553|ref|ZP_03786587.1| sugar isomerase, KpsF/GutQ family protein [Brucella ceti str. Cudo]
 gi|225616399|gb|EEH13447.1| sugar isomerase, KpsF/GutQ family protein [Brucella ceti str. Cudo]
          Length = 359

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 40  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 99

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 100 KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 159

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 160 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 219

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 220 PSDFRTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 279

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 280 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 339

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 340 -EANRPIGLVHFHDLLRIG 357


>gi|83859875|ref|ZP_00953395.1| sugar isomerase, KpsF/GutQ [Oceanicaulis alexandrii HTCC2633]
 gi|83852234|gb|EAP90088.1| sugar isomerase, KpsF/GutQ [Oceanicaulis alexandrii HTCC2633]
          Length = 329

 Score =  357 bits (916), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 141/321 (43%), Positives = 199/321 (61%), Gaps = 6/321 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +    R++  E  GLS L  +L  E        V++I  +KGR++  G+GKSGH+  K
Sbjct: 12  EILASMRRTLSLEMSGLSQLSDALSEEA----VRVVKRIAGLKGRLICAGVGKSGHVARK 67

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ +VH AEASHGDLGMIT DD ++ LS SG + EL  ++ Y RRF +PL
Sbjct: 68  IAATLASTGTPASYVHPAEASHGDLGMITADDAVLALSNSGETKELGDMIAYCRRFGVPL 127

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T+  +S +A  +DI+L  PK PE+C    APTTS  M +A GDALA+AL+E+R F+ 
Sbjct: 128 IGMTAGAESTLAKGSDILLLCPKAPEACGETRAPTTSTTMMMAFGDALAVALIEARGFTA 187

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG+      ++MH+GD++PL      + DA+ ++SEK FGCV V D   
Sbjct: 188 TDFARFHPGGALGSALARVDELMHAGDAMPLAPELASMGDALIVMSEKGFGCVGVTDGDG 247

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMV 319
           KL GI+T+GD+ R    DL  LSV+ VM   P       L + A++++      I+ L V
Sbjct: 248 KLSGIVTDGDLRRRMGPDLIELSVKSVMTPGPITTTPGALASDALRVMTAGNRKITQLFV 307

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
            D+  K +G++H  DLLR G+
Sbjct: 308 CDEAGKPVGLLHIHDLLRAGV 328


>gi|17988365|ref|NP_540998.1| polysialic acid capsule expression protein KPSF [Brucella
           melitensis bv. 1 str. 16M]
 gi|148557832|ref|YP_001257149.1| sugar isomerase KpsF/GutQ [Brucella ovis ATCC 25840]
 gi|237816595|ref|ZP_04595587.1| sugar isomerase, KpsF/GutQ family [Brucella abortus str. 2308 A]
 gi|297250024|ref|ZP_06933725.1| arabinose-5-phosphate isomerase [Brucella abortus bv. 5 str. B3196]
 gi|17984142|gb|AAL53262.1| polysialic acid capsule expression protein kpsf [Brucella
           melitensis bv. 1 str. 16M]
 gi|148369117|gb|ABQ61989.1| sugar isomerase, KpsF/GutQ [Brucella ovis ATCC 25840]
 gi|237787408|gb|EEP61624.1| sugar isomerase, KpsF/GutQ family [Brucella abortus str. 2308 A]
 gi|297173893|gb|EFH33257.1| arabinose-5-phosphate isomerase [Brucella abortus bv. 5 str. B3196]
          Length = 359

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 40  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 99

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 100 KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 159

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 160 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 219

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 220 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 279

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 280 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 339

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 340 -EANRPIGLVHFHDLLRIG 357


>gi|270263242|ref|ZP_06191512.1| arabinose 5-phosphate isomerase [Serratia odorifera 4Rx13]
 gi|270042930|gb|EFA16024.1| arabinose 5-phosphate isomerase [Serratia odorifera 4Rx13]
          Length = 328

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLQIERDGLAQLDRYINAD----FTRACELIAGCCGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH AEASHGDLGM+T  D+++ +S SG S+E++A++   +R  IPLI +
Sbjct: 70  TFASTGTPSFFVHPAEASHGDLGMVTAQDIVLAISNSGESNEIQALIPVLKRQQIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPESSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MHSGD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRRLLLRVCDIMHSGDEIPHVSADASLRDALLEITRKNLGMTVICDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    +LN   + DVM      +  + L   A+ L++Q +I+ L+V D
Sbjct: 250 AGIFTDGDLRRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITALLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|123443937|ref|YP_001007908.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090898|emb|CAL13780.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 325

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 11  QAGKQVLQIEREGLAQLDQYINDD----FTQACEAIFNCHGKVVVMGMGKSGHIGCKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 67  TFASTGTPSFFVHPGEASHGDLGMITPQDIVLAISNSGESNEILALIPVLKRQKIQLICM 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 127 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 186

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +
Sbjct: 187 ALSHPGGALGRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 246

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 247 KGIFTDGDLRRVFDMGIDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVAD 306

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 307 GDQ-LLGVVHMHDMLRAGVV 325


>gi|227887918|ref|ZP_04005723.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|300990927|ref|ZP_07179379.1| arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|301047956|ref|ZP_07195001.1| arabinose 5-phosphate isomerase [Escherichia coli MS 185-1]
 gi|37079479|sp|Q8FD73|KDSD_ECOL6 RecName: Full=Arabinose 5-phosphate isomerase
 gi|227835314|gb|EEJ45780.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|300300188|gb|EFJ56573.1| arabinose 5-phosphate isomerase [Escherichia coli MS 185-1]
 gi|300407003|gb|EFJ90541.1| arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|307555290|gb|ADN48065.1| D-arabinose 5-phosphate isomerase [Escherichia coli ABU 83972]
 gi|315294857|gb|EFU54196.1| arabinose 5-phosphate isomerase [Escherichia coli MS 153-1]
          Length = 328

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGCPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRRLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|114327364|ref|YP_744521.1| arabinose-5-phosphate isomerase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315538|gb|ABI61598.1| arabinose-5-phosphate isomerase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 352

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 149/346 (43%), Positives = 206/346 (59%), Gaps = 17/346 (4%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
            +S ++   S    + +  A   ++ E   L  L  +L      QF  AVE I A  GRV
Sbjct: 10  VESASKPAFSDTDKARLAVAREVLLTEADALKVLADAL----DEQFLHAVEMIAASTGRV 65

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V++GIGKSGH+G K+A+TL+STGTP+ FVH AEASHGDLGMI   D+++ LS SG + EL
Sbjct: 66  VVSGIGKSGHVGRKMAATLSSTGTPALFVHPAEASHGDLGMIVNGDIVLALSNSGETSEL 125

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             ++ + RRF +PLI +T  + S +A  ADIVL LP   E+CP GLAPTTS  +Q+A+GD
Sbjct: 126 ADLVAHTRRFGLPLIGVTGRSGSALARAADIVLLLPPVAEACPMGLAPTTSTTLQMALGD 185

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALL+ R F+  DF   HPGG+LG       D+M SGD +PLV     + +A+ ++S
Sbjct: 186 ALAVALLKRRGFTARDFGAFHPGGRLGAQLRTVGDIMRSGDDMPLVLPDMRMDEAVLLIS 245

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            K  GCV VVD+  +L GI+T+GD+ R+   DL    V D+M ++P+ I    L   A+ 
Sbjct: 246 SKSLGCVGVVDKEGRLIGIVTDGDLRRHMAPDLWQRPVADIMTRDPRTIAPSVLAAEALH 305

Query: 308 LL-------------RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +                 I+ L VVD+    IG+VH  DLLR G+
Sbjct: 306 TMTGPAGKGLQNSGQTARPINTLFVVDETHTPIGVVHIHDLLRAGV 351


>gi|238793706|ref|ZP_04637328.1| Arabinose 5-phosphate isomerase [Yersinia intermedia ATCC 29909]
 gi|238726947|gb|EEQ18479.1| Arabinose 5-phosphate isomerase [Yersinia intermedia ATCC 29909]
          Length = 340

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A   I    G+VV+ G+GKSGHIG K+A+
Sbjct: 26  QAGKQVLRIEREGLAQLDQYINDD----FANACNAIFNCHGKVVVMGMGKSGHIGCKIAA 81

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R  IPLI +
Sbjct: 82  TLASTGTPAFFVHPGEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIPLICM 141

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 142 SNNPDSSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 201

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP +     L DA+  ++ K  G   + D+   +
Sbjct: 202 ALSHPGGALGRKLLLRISDIMHTGAEIPHISPDASLRDALLEITRKNLGLTVICDDLMMI 261

Query: 264 KGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 262 KGIFTDGDLRRIFDLGVDLNHAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVAD 321

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 322 GDQ-LLGVVHMHDMLRAGVV 340


>gi|152980996|ref|YP_001355037.1| polysialic acid capsule expression protein [Janthinobacterium sp.
           Marseille]
 gi|151281073|gb|ABR89483.1| polysialic acid capsule expression protein [Janthinobacterium sp.
           Marseille]
          Length = 342

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 198/342 (57%), Gaps = 3/342 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              SH  +      +      +Q A  ++  E   + +L+  +  + S QF  AV  +  
Sbjct: 1   MSVSHAPNPPATFDAQSTARALQFACDTLQIEADAILALKERITSKTSQQFIQAVTLLLN 60

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            KGRVV++GIGKSGHI  K+ASTLASTGTP+FFVHAAEASHGDLGMIT DD++I +S+SG
Sbjct: 61  CKGRVVVSGIGKSGHIARKIASTLASTGTPAFFVHAAEASHGDLGMITADDVLIGISYSG 120

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  I+   +R    LI IT  + S +A  AD+ L +  + E+CP  LAPT S    
Sbjct: 121 EAGELLGIVPTIKRMGARLITITGNDASNLAVQADVHLNVHIDKEACPLNLAPTASTTAT 180

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F E DF   HPGG LG        DVM +G++IP V     L  
Sbjct: 181 LALGDALAVALLDARGFGEEDFARSHPGGALGRRLLTHVRDVMRTGEAIPTVAKDATLYA 240

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILED 299
           A+   S+K     AVVD   +  G+ T+GD+ R     +D + LS+ +VM  +P+ +  D
Sbjct: 241 ALLESSKKGMAMTAVVDAEGRAIGVFTDGDLRRLIETQQDFSKLSIAEVMHASPRSVHPD 300

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A+ ++  + I+ L+V D+  K +G +H  DL R  +I
Sbjct: 301 QLAVDAVDMMETYRINQLLVTDNSGKLVGALHIHDLTRAKVI 342


>gi|29654084|ref|NP_819776.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 493]
 gi|161830008|ref|YP_001596939.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 331]
 gi|29541350|gb|AAO90290.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 493]
 gi|161761875|gb|ABX77517.1| arabinose-5-phosphate isomerase [Coxiella burnetii RSA 331]
          Length = 324

 Score =  356 bits (915), Expect = 2e-96,   Method: Composition-based stats.
 Identities = 131/314 (41%), Positives = 197/314 (62%), Gaps = 7/314 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E R + SL + +      +F  A   +   KGRVV+ G+GKSGHI  K+A+TLAST
Sbjct: 14  VIATELRAIQSLHARI----DEKFVTACNTLFNCKGRVVVLGVGKSGHIAKKIAATLAST 69

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSF+VH +EASHGD+GM+T  D+ + +S+SG + E+  +L   +R  + LIA+T + +
Sbjct: 70  GTPSFYVHPSEASHGDMGMVTPQDVALAISYSGETPEIINLLPTLKRLGVALIALTGKMQ 129

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  AD V+ +  E E+CP GLAPT+S    L +GDALAIALLE+R F+ +DF  +HP
Sbjct: 130 STLARIADTVIDVSVEQEACPLGLAPTSSTTATLVMGDALAIALLEARGFTADDFARIHP 189

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG    +  +D+MH  D +P+VK  C L +A+  +++K  G   VV +  +L G+ T
Sbjct: 190 GGSLGRRLLLHIADLMHPKDKMPIVKPDCLLDEALVEITKKSLGMTTVVSDSGQLLGVFT 249

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GD+ R   K  D++   +E VM KN   +    L   A+++++Q+ I+ L+VVD     
Sbjct: 250 DGDLRRTLDKGYDIHRTPIEKVMTKNSITVPPKLLAAEALKMMQQNKITSLVVVDTDASP 309

Query: 327 IGIVHFLDLLRFGI 340
           +G++H  DLLR G+
Sbjct: 310 VGVIHMHDLLRAGV 323


>gi|152972121|ref|YP_001337267.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|262042757|ref|ZP_06015911.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|329997613|ref|ZP_08302882.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
 gi|150956970|gb|ABR79000.1| putative isomerase [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|259039982|gb|EEW41099.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328538954|gb|EGF65007.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
          Length = 334

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 134/320 (41%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 20  QAGRQVLEIEREGLAQLDQYINED----FTHACETIFRCGGKVVVMGMGKSGHIGRKMAA 75

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT +FFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  + LI I
Sbjct: 76  TFASTGTSAFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRQQVKLICI 135

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 136 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDF 195

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V +   L DA+  ++ K  G  A+ D+   +
Sbjct: 196 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDDMNI 255

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+   S+ DVM +    I   TL   A+ L++  +I+ ++V D
Sbjct: 256 IGIFTDGDLRRVFDTGVDMRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVAD 315

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  DLLR G++
Sbjct: 316 GD-HLLGVVHMHDLLRAGVV 334


>gi|238019686|ref|ZP_04600112.1| hypothetical protein VEIDISOL_01560 [Veillonella dispar ATCC 17748]
 gi|237863727|gb|EEP65017.1| hypothetical protein VEIDISOL_01560 [Veillonella dispar ATCC 17748]
          Length = 323

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 141/326 (43%), Positives = 196/326 (60%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A + +  E R +  L S L       F  AV  I A KGRVV TG+GKSGHIG K
Sbjct: 2   TILEQAAQVLHEEARAIEELSSRL----DHNFVNAVNMILACKGRVVCTGMGKSGHIGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    L
Sbjct: 58  IAATLASTGTPALFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  + +S +A ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+ 
Sbjct: 118 ICVVGKPESTLAKNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F V HPGG LG    +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE 
Sbjct: 178 ENFAVFHPGGSLGRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDED 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
             L G++T+GD+ R      +     VED+M   P+ I +D L   A+ L+ ++    I+
Sbjct: 238 GHLLGLVTDGDVRRGLDSGSNFLEWPVEDMMTSMPRTITKDKLAAEALHLMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD   K +GIVH  DLLR GI+
Sbjct: 298 VLPVVDTDNKCLGIVHITDLLRRGIV 323


>gi|34498782|ref|NP_902997.1| KpsF/GutQ family protein [Chromobacterium violaceum ATCC 12472]
 gi|34104633|gb|AAQ60991.1| probable KpsF/GutQ family protein [Chromobacterium violaceum ATCC
           12472]
          Length = 311

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 150/313 (47%), Positives = 203/313 (64%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ E   LS+L   L GE    F  AVE I A +GRV++TG+GKSGH+G K+A+TLASTG
Sbjct: 2   LLTEAAALSTLAERLNGE----FLDAVEAILACQGRVIVTGMGKSGHVGRKIAATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+FFVH AEA+HGDLGMIT DD++I LS SG S E+ ++L   +     LIA+T  ++S
Sbjct: 58  TPAFFVHPAEAAHGDLGMITGDDVVIALSNSGESAEVVSLLPALKLKGSKLIAVTGRSES 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD++L    E E+CP  LAPTTS   Q+A+GDALA+ L+E+R F ++DF + HPG
Sbjct: 118 TLAQAADVLLHTHVEREACPLNLAPTTSTTAQIALGDALAVTLMEARGFGQSDFALSHPG 177

Query: 211 GKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG    V   D+MH GD++P V  G PL DA+  +S+KR G V V D    L GI T+
Sbjct: 178 GSLGRRLLVHVKDLMHGGDALPRVAPGTPLKDALLEMSQKRLGMVTVGDADGTLHGIYTD 237

Query: 270 GDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GD+ R   K  D+  L V++VM + P+ I  D L   A  L++QH I+ L+VVD   K  
Sbjct: 238 GDLRRTLEKGVDVYRLKVDEVMGRKPRTIQPDKLAAEAGFLMKQHQITSLVVVDAQGKLA 297

Query: 328 GIVHFLDLLRFGI 340
           G++H  DLL  G+
Sbjct: 298 GVLHMHDLLHAGV 310


>gi|283836256|ref|ZP_06355997.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291067620|gb|EFE05729.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 328

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EKI +  G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIEREGLAELDQYINQ----NFTLACEKIFSCPGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM++  D++I +S SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVSPQDVVIAISNSGESNEIAALIPVLKRLHVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVNKSASLRDALLEITRKNLGMTVICDDAMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVDALNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-LLLGVLHMHDLLRAGVV 328


>gi|168463459|ref|ZP_02697376.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|195633752|gb|EDX52166.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
          Length = 328

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYIDQ----NFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|146313267|ref|YP_001178341.1| D-arabinose 5-phosphate isomerase [Enterobacter sp. 638]
 gi|145320143|gb|ABP62290.1| KpsF/GutQ family protein [Enterobacter sp. 638]
          Length = 328

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 134/320 (41%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +  +    F  A EKI +  G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKEVLEIEREGLAQLDQYINQD----FSLACEKIFSCAGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDIVIALSNSGESNEILALIPVLKRLHVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESTMARAADVHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+G  IP V    PL DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGAEIPRVSKDAPLRDALLEITRKNLGMTVICDDQMNI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRTLGIADVMTPGGIRVRPATLAVEVLNLMQSRHITAVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  DLLR G++
Sbjct: 310 GDQ-LLGVVHMHDLLRAGVV 328


>gi|200389284|ref|ZP_03215896.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199606382|gb|EDZ04927.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 328

 Score =  356 bits (914), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EKI    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKIFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|187927375|ref|YP_001897862.1| KpsF/GutQ family protein [Ralstonia pickettii 12J]
 gi|309779924|ref|ZP_07674678.1| KpsF/GutQ [Ralstonia sp. 5_7_47FAA]
 gi|187724265|gb|ACD25430.1| KpsF/GutQ family protein [Ralstonia pickettii 12J]
 gi|308921283|gb|EFP66926.1| KpsF/GutQ [Ralstonia sp. 5_7_47FAA]
          Length = 327

 Score =  356 bits (913), Expect = 3e-96,   Method: Composition-based stats.
 Identities = 136/328 (41%), Positives = 190/328 (57%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E R +  L+     ++S  F  AVE +    GRVV++G+GKSG
Sbjct: 4   NFNPDRALALAQQTFDIEARAVLGLK----TQVSADFARAVEMVLGCTGRVVVSGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL  IL   +R
Sbjct: 60  HVARKIAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELNVILPLVKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T    S +  HAD+VL    + E+CP  LAPT S   Q+A+GDALA+A+L++
Sbjct: 120 MGAKLIAVTGNPGSSLGKHADVVLNSHVDVEACPLNLAPTASTTAQIALGDALAVAVLDA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F   DF   HPGG LG        DVM +GD+IP V    PL  A+  ++ K     A
Sbjct: 180 RGFGAEDFARSHPGGSLGRKLLTHVRDVMRAGDAIPRVDQDTPLSQALMEITRKGMAMTA 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD      G+ T+GD+ R     +D  T+ + +VM +NP+ I  D L   A++++  H 
Sbjct: 240 VVDAQGHAVGVFTDGDLRRLLETPRDWRTVPINEVMHRNPRSIGPDQLAVEAVEVMETHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD     +G +H  DL R  +I
Sbjct: 300 INQLLVVDAAGLLVGALHIHDLTRAKVI 327


>gi|238758311|ref|ZP_04619489.1| Arabinose 5-phosphate isomerase [Yersinia aldovae ATCC 35236]
 gi|238703434|gb|EEP95973.1| Arabinose 5-phosphate isomerase [Yersinia aldovae ATCC 35236]
          Length = 334

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L   +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 20  QAGKQVLHIEREGLAQLGQYINDD----FAKACETIFNCHGKVVVMGMGKSGHIGCKIAA 75

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGM+TR D+++ +S SG S+E+ A++   +R  IPLI +
Sbjct: 76  TFASTGTPAFFVHPGEASHGDLGMVTRQDIVLAISNSGESNEILALIPVLKRQRIPLICM 135

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 136 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 195

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP +     L DA+  ++ K  G   + D+   +
Sbjct: 196 ALSHPGGALGRKLLLRISDIMHTGADIPHISPDASLRDALLEITRKNLGLTVICDDLMMI 255

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ L+V D
Sbjct: 256 KGIFTDGDLRRVFDMGIDLNNAKIADVMTGGGIRVRPTMLAVDALNLMESRHITALLVAD 315

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 316 GDQ-LLGVVHMHDMLRAGVV 334


>gi|168238017|ref|ZP_02663075.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|194736831|ref|YP_002116265.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|194712333|gb|ACF91554.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197289074|gb|EDY28443.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
          Length = 328

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQD----FTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|330958009|gb|EGH58269.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 324

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A +GRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQAAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASQGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SG+++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGTTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T    SV+A  AD+ L +    E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 KMISLTGNPDSVLAKAADVNLNVHVAHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIIE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R   +  D+   ++++VM  + K    + L   A++++  + I  
Sbjct: 240 ADGKLAGIFTDGDLRRTLDRPFDIRQTTIDEVMTHHGKTAHAEMLAAEALKIMEDNKIGA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQDDRPVGAFNLQDLLRAGVM 324


>gi|254497758|ref|ZP_05110531.1| polysialic acid capsule expression protein [Legionella drancourtii
           LLAP12]
 gi|254353051|gb|EET11813.1| polysialic acid capsule expression protein [Legionella drancourtii
           LLAP12]
          Length = 320

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 131/314 (41%), Positives = 200/314 (63%), Gaps = 7/314 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E + +  L   +       F  A E + A +GR+V+TG+GKSGHI +K+A+TL+ST
Sbjct: 10  VIETEAQAVFELTQRIDSR----FEKACELLLACQGRIVVTGMGKSGHIANKIAATLSST 65

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G+PSFF+H  EASHGDLGMITR D +I +S SG++ EL  +L   +R  +PLI +T   +
Sbjct: 66  GSPSFFMHPGEASHGDLGMITRQDTVIAISNSGNTTELVTLLPLLKRLEVPLITLTGNTE 125

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S++A  ADI L +  + E+CP GLAPTTS  + L +GDALAIALL++R FSE DF + HP
Sbjct: 126 SILARAADINLDVSIKQEACPLGLAPTTSTTVSLVMGDALAIALLQARGFSEEDFALSHP 185

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GG LG  L +   ++ H G+ +PL+     + +A+  ++ K+ G   VVD+   L G+ T
Sbjct: 186 GGALGKRLLLRVDELCHQGNDLPLISENATVSEALIEVTNKKLGMTCVVDQKGYLVGVYT 245

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GDI R   +  D+NT  +++VM ++ + I +  L   A+ ++++H+I+ L+V DD    
Sbjct: 246 DGDIRRTLTRQCDINTTQLKEVMTRSARTIHKGMLAAEAVAIMQKHSITSLIVADDKNHP 305

Query: 327 IGIVHFLDLLRFGI 340
           I ++H  DLL+ G+
Sbjct: 306 IAVLHLHDLLKAGV 319


>gi|254711942|ref|ZP_05173753.1| sugar isomerase, KpsF/GutQ [Brucella ceti M644/93/1]
 gi|254715012|ref|ZP_05176823.1| sugar isomerase, KpsF/GutQ [Brucella ceti M13/05/1]
 gi|261216715|ref|ZP_05930996.1| KpsF/GutQ family protein [Brucella ceti M13/05/1]
 gi|261319582|ref|ZP_05958779.1| KpsF/GutQ family protein [Brucella ceti M644/93/1]
 gi|260921804|gb|EEX88372.1| KpsF/GutQ family protein [Brucella ceti M13/05/1]
 gi|261292272|gb|EEX95768.1| KpsF/GutQ family protein [Brucella ceti M644/93/1]
          Length = 333

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 169/319 (52%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK   P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTDTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|317494036|ref|ZP_07952452.1| KpsF/GutQ family sugar isomerase [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316917809|gb|EFV39152.1| KpsF/GutQ family sugar isomerase [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 328

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 193/318 (60%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E+ GL+ L+  +  +    F  + E I +  G+VV+ G+GKSGHIG K+A+TL
Sbjct: 16  GKQVLQTEREGLAQLDQYINED----FTKSCEAILSCLGKVVVMGMGKSGHIGRKIAATL 71

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGM++  D+++ +S SG S E++A++   +R  + LI +T+
Sbjct: 72  ASTGTPAFFVHPGEASHGDLGMVSSHDIVLAISNSGESHEIQALIPVLKRQKVKLICMTN 131

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF +
Sbjct: 132 NPDSSMGKAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDFAL 191

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  SD+MH+G  +P V     L DA+  ++ K  G   + D+  K++G
Sbjct: 192 SHPGGALGRKLLLRVSDIMHTGSELPHVSRDASLRDALLEITRKNLGLTVICDDLMKIEG 251

Query: 266 IITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R F    DLN   + DVM      I  + L   A+ L++  +I+ L+V D  
Sbjct: 252 IFTDGDLRRIFDLGVDLNNAKIADVMTSGGIRIRPNALAVDALNLMQARHITSLLVADGD 311

Query: 324 QKAIGIVHFLDLLRFGII 341
           Q  IG+VH  D+LR G++
Sbjct: 312 Q-LIGVVHMHDMLRAGVV 328


>gi|242241050|ref|YP_002989231.1| D-arabinose 5-phosphate isomerase [Dickeya dadantii Ech703]
 gi|242133107|gb|ACS87409.1| KpsF/GutQ family protein [Dickeya dadantii Ech703]
          Length = 328

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
               + +  E+  L+ L+  + G     F  A EK+   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  TAGRQVLSIERDSLAQLDQYIDG----NFALACEKMFHCRGKVVVMGMGKSGHIGCKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EASHGDLGMI   D++I +S SG S E+ A++   +R  + LI +
Sbjct: 70  TFASTGTPSFFVHPGEASHGDLGMIAAQDVVIAISNSGESHEILALIPVLKRLQVCLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGNPDSTMAKTADIHLCVHVAQEACPLGLAPTSSTTAALVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MHSG+ IP V     L DA+  ++ K  G  A+ +  +K+
Sbjct: 190 ALSHPGGALGRKLLLRVEDIMHSGEEIPCVDSHASLRDALLEITRKNLGMTAICNADRKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    +LN   + DVM +    +   TL   A+ L++  +I+ LMV D
Sbjct: 250 EGIFTDGDLRRVFDMNINLNNARITDVMTRGGIRVTPHTLAVDALNLMQSRHITSLMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  + +GI+H  D+LR G++
Sbjct: 310 DD-RLLGIIHMHDMLRAGVV 328


>gi|238789756|ref|ZP_04633538.1| Arabinose 5-phosphate isomerase [Yersinia frederiksenii ATCC 33641]
 gi|238722115|gb|EEQ13773.1| Arabinose 5-phosphate isomerase [Yersinia frederiksenii ATCC 33641]
          Length = 351

 Score =  356 bits (913), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 133/328 (40%), Positives = 191/328 (58%), Gaps = 8/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S  K +  Q   + +  E  GL+ L+  +  +    F  A E I    G+VV+ G+GKSG
Sbjct: 29  SQPKMNFQQAGKQVLQIELEGLAQLDQYINDD----FAKACEAIFNCHGKVVVMGMGKSG 84

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+T ASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S+E+ A++   +R
Sbjct: 85  HIGCKIAATFASTGTPSFFVHPGEASHGDLGMITSQDIVLAISNSGESNEILALIPVLKR 144

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             I LI ++S   S +   ADI + +    E+C  GLAPTTS    L +GDALA+ALL++
Sbjct: 145 QKIQLICMSSNPDSTMGKAADIHICIKVPQEACSLGLAPTTSTTATLVMGDALAVALLQA 204

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F++ DF + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   
Sbjct: 205 RGFTQEDFALSHPGGALGRKLLLRISDIMHTGADIPHVSPDASLRDALLEITRKNLGLTV 264

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + D+   +KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +
Sbjct: 265 ICDDLMMIKGIFTDGDLRRVFDMGVDLNNAKIADVMTSGGIRVRPTMLAVDALNLMESRH 324

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ ++V D  Q  +G+VH  D+LR G++
Sbjct: 325 ITAVLVADGDQ-LLGVVHMHDMLRAGVV 351


>gi|224585112|ref|YP_002638911.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469640|gb|ACN47470.1| hypothetical protein SPC_3385 [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|326625065|gb|EGE31410.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 335

 Score =  355 bits (912), Expect = 4e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 21  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 76

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 77  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 136

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 137 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 196

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 197 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 256

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 257 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 316

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 317 GDQ-LLGVLHMHDLLRAGVV 335


>gi|110833418|ref|YP_692277.1| KpsF/GutQ family protein [Alcanivorax borkumensis SK2]
 gi|110646529|emb|CAL16005.1| KpsF/GutQ family protein [Alcanivorax borkumensis SK2]
          Length = 322

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 199/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    R +  E R + +L+ SL       F  A + +   KGRV++TG+GKSGH+
Sbjct: 1   MSHNHISVGQRVLEIEARAVDALKDSLDT----SFCAACDLMLNAKGRVIVTGMGKSGHV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSKLA+TLASTGTPSFFVH  EASHGDLGMIT DD+++ LS SG + E+ AIL   +R  
Sbjct: 57  GSKLAATLASTGTPSFFVHPGEASHGDLGMITADDVVLALSNSGETAEVLAILPVIKRKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ +T   +S +A  +D+ LT+    E+CPH LAPT+S    LA+GDALAIALLE+R 
Sbjct: 117 TALVGMTGRPQSALAQLSDVHLTVAVAEEACPHNLAPTSSTTAALAMGDALAIALLEARG 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG    +   D+MH+G+ +P+V     L +A+  ++ K  G  A+ 
Sbjct: 177 FTPEDFALSHPGGSLGRRLLLKVDDIMHTGEQLPVVSTTTSLSEALLEMTHKGLGMTAIT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                L GI T+GD+ R   +D++    ++ +VM+ +P  I +  L   A+Q++    I+
Sbjct: 237 HTDGTLAGIFTDGDLRRILDRDIDIRKATIAEVMVSDPITIAQGHLAAEALQIMENRKIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            LMV D   K +G  +  DLLR G++
Sbjct: 297 GLMVCDSDGKPLGAFNMQDLLRAGVV 322


>gi|319407601|emb|CBI81251.1| sugar isomerase [Bartonella sp. 1-1C]
          Length = 331

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
             +  H+L   + +  AL++I  EKRGL +LE + Q  L+  F  AV+ I    G VVIT
Sbjct: 2   TIQSSHTLNLQNAIILALKTISIEKRGLKALEKAFQENLAASFKAAVQAISNANGHVVIT 61

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI   D+I+ LSWSG + EL  I
Sbjct: 62  GLGKSGHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSGDVILALSWSGETTELSGI 121

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + +A RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL IGDALA
Sbjct: 122 ISHAARFHIPLIAITSGEHSILGQQADIVLLLPKVEEACPHGLAPTTSTTMQLVIGDALA 181

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLE R F+  DF + HPGG LG       D+MH G+ +PLV  G  + +A+ +L +K 
Sbjct: 182 IALLEMRGFTATDFKIYHPGGSLGANLKYVRDIMHQGNRLPLVTQGVSMTEAMEVLVKKH 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   + 
Sbjct: 242 FGCVGVVNPRGELIGIITDGDLVRNIHNDLSQFNVDEVMTKNPKTVGPDTLVGAATAFIN 301

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            H+I    V+ + +K IGIVHF DLLR G+
Sbjct: 302 DHHIGAFFVI-ENKKPIGIVHFHDLLRIGV 330


>gi|62181823|ref|YP_218240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62129456|gb|AAX67159.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322716312|gb|EFZ07883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
 gi|323131675|gb|ADX19105.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326629338|gb|EGE35681.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 336

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 22  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 77

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 78  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 137

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 138 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 197

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 198 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 257

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 258 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 317

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 318 GDQ-LLGVLHMHDLLRAGVV 336


>gi|332305020|ref|YP_004432871.1| KpsF/GutQ family protein [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172349|gb|AEE21603.1| KpsF/GutQ family protein [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 323

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 126/327 (38%), Positives = 195/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   +Q ALR +  E + +  L   +       F  A E +K  KG+VV+ G+GKSGH
Sbjct: 1   MSQQEYIQSALRVLKIEGQAIEQLAQYIDS----NFIAACELMKNCKGKVVVCGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++TLASTGTP+FF+H  EA+HGDLGM+T  D+++ +S SG + EL A+L   +R 
Sbjct: 57  IGHKISATLASTGTPAFFMHPGEANHGDLGMLTEQDVLLAISNSGETSELLALLPVVKRR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I +IA+++  +S +  HAD+ L +  E E+C  GLAPT S    L +GDALA+ALL++R
Sbjct: 117 GIAIIALSNNPQSSLGKHADVNLCIKVEKEACSLGLAPTASTTATLVMGDALAVALLDAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG    +   D+M  G+ +PLV     +  A+  +S K  G   +
Sbjct: 177 GFTPDDFALSHPGGALGRKLLLKLDDIMCQGELMPLVSTTHTISQALLEISRKGLGMAGI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V E  +L GI T+GD+ R      D++++S+E VM  N     + TL    + ++++  I
Sbjct: 237 VGEDGRLLGIFTDGDLRRVLDARVDIHSVSIESVMTANCVTASQGTLAAEVLNVMQKRKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           S L +VDD  + +G ++   LL  G+I
Sbjct: 297 SSLFIVDDNHQPVGAINMQTLLSAGVI 323


>gi|113969022|ref|YP_732815.1| KpsF/GutQ family protein [Shewanella sp. MR-4]
 gi|113883706|gb|ABI37758.1| KpsF/GutQ family protein [Shewanella sp. MR-4]
          Length = 325

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 136/327 (41%), Positives = 207/327 (63%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  S+VMHSGD +PLVK    + DA+  +S+K  G  AV
Sbjct: 179 GFTREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + DVM +N   I E+ L   A+Q++   NI
Sbjct: 239 IDEQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D     +G ++ LD+++ G+I
Sbjct: 299 NGLIVIDKDNHPVGALNMLDMVKAGVI 325


>gi|161616325|ref|YP_001590290.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161365689|gb|ABX69457.1| hypothetical protein SPAB_04133 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 328

 Score =  355 bits (912), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYIDQ----NFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMLQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|254706367|ref|ZP_05168195.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis M163/99/10]
 gi|254711343|ref|ZP_05173154.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis B2/94]
 gi|256030028|ref|ZP_05443642.1| sugar isomerase, KpsF/GutQ [Brucella pinnipedialis M292/94/1]
 gi|256158200|ref|ZP_05456109.1| sugar isomerase, KpsF/GutQ [Brucella ceti M490/95/1]
 gi|256252858|ref|ZP_05458394.1| sugar isomerase, KpsF/GutQ [Brucella ceti B1/94]
 gi|260166921|ref|ZP_05753732.1| sugar isomerase, KpsF/GutQ [Brucella sp. F5/99]
 gi|261219945|ref|ZP_05934226.1| KpsF/GutQ family protein [Brucella ceti B1/94]
 gi|261313813|ref|ZP_05953010.1| KpsF/GutQ family protein [Brucella pinnipedialis M163/99/10]
 gi|261318946|ref|ZP_05958143.1| KpsF/GutQ family protein [Brucella pinnipedialis B2/94]
 gi|261756306|ref|ZP_06000015.1| KpsF/GutQ family protein [Brucella sp. F5/99]
 gi|265987050|ref|ZP_06099607.1| KpsF/GutQ family protein [Brucella pinnipedialis M292/94/1]
 gi|265996712|ref|ZP_06109269.1| KpsF/GutQ family protein [Brucella ceti M490/95/1]
 gi|260918529|gb|EEX85182.1| KpsF/GutQ family protein [Brucella ceti B1/94]
 gi|261298169|gb|EEY01666.1| KpsF/GutQ family protein [Brucella pinnipedialis B2/94]
 gi|261302839|gb|EEY06336.1| KpsF/GutQ family protein [Brucella pinnipedialis M163/99/10]
 gi|261736290|gb|EEY24286.1| KpsF/GutQ family protein [Brucella sp. F5/99]
 gi|262551009|gb|EEZ07170.1| KpsF/GutQ family protein [Brucella ceti M490/95/1]
 gi|264659247|gb|EEZ29508.1| KpsF/GutQ family protein [Brucella pinnipedialis M292/94/1]
          Length = 333

 Score =  355 bits (911), Expect = 5e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFRTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|23499840|ref|NP_699280.1| sugar isomerase KpsF/GutQ [Brucella suis 1330]
 gi|62317032|ref|YP_222885.1| sugar isomerase KpsF/GutQ [Brucella abortus bv. 1 str. 9-941]
 gi|83269026|ref|YP_418317.1| CBS domain-containing protein [Brucella melitensis biovar Abortus
           2308]
 gi|189022299|ref|YP_001932040.1| KpsF/GutQ family protein [Brucella abortus S19]
 gi|254691484|ref|ZP_05154738.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 6 str. 870]
 gi|254695220|ref|ZP_05157048.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 3 str. Tulya]
 gi|254698319|ref|ZP_05160147.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 2 str. 86/8/59]
 gi|254699389|ref|ZP_05161217.1| sugar isomerase, KpsF/GutQ [Brucella suis bv. 5 str. 513]
 gi|254702507|ref|ZP_05164335.1| sugar isomerase, KpsF/GutQ [Brucella suis bv. 3 str. 686]
 gi|254731762|ref|ZP_05190340.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 4 str. 292]
 gi|256014869|ref|YP_003104878.1| sugar isomerase, KpsF/GutQ [Brucella microti CCM 4915]
 gi|256042998|ref|ZP_05445944.1| sugar isomerase, KpsF/GutQ [Brucella melitensis bv. 1 str. Rev.1]
 gi|256112018|ref|ZP_05452963.1| sugar isomerase, KpsF/GutQ [Brucella melitensis bv. 3 str. Ether]
 gi|256256669|ref|ZP_05462205.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 9 str. C68]
 gi|260544268|ref|ZP_05820089.1| KpsF/GutQ family protein [Brucella abortus NCTC 8038]
 gi|260564231|ref|ZP_05834716.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. 16M]
 gi|260757104|ref|ZP_05869452.1| KpsF/GutQ family protein [Brucella abortus bv. 6 str. 870]
 gi|260759526|ref|ZP_05871874.1| KpsF/GutQ family protein [Brucella abortus bv. 4 str. 292]
 gi|260762770|ref|ZP_05875102.1| KpsF/GutQ family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260882913|ref|ZP_05894527.1| KpsF/GutQ family protein [Brucella abortus bv. 9 str. C68]
 gi|261215582|ref|ZP_05929863.1| KpsF/GutQ family protein [Brucella abortus bv. 3 str. Tulya]
 gi|261749838|ref|ZP_05993547.1| KpsF/GutQ family protein [Brucella suis bv. 5 str. 513]
 gi|261753080|ref|ZP_05996789.1| KpsF/GutQ family protein [Brucella suis bv. 3 str. 686]
 gi|265989435|ref|ZP_06101992.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. Rev.1]
 gi|265993464|ref|ZP_06106021.1| KpsF/GutQ family protein [Brucella melitensis bv. 3 str. Ether]
 gi|23463410|gb|AAN33285.1| sugar isomerase, KpsF/GutQ [Brucella suis 1330]
 gi|62197225|gb|AAX75524.1| sugar isomerase, KpsF/GutQ [Brucella abortus bv. 1 str. 9-941]
 gi|82939300|emb|CAJ12238.1| CBS domain:Cytochrome b5:Sugar isomerase (SIS):KpsF/GutQ family
           protein [Brucella melitensis biovar Abortus 2308]
 gi|189020873|gb|ACD73594.1| KpsF/GutQ family protein [Brucella abortus S19]
 gi|255997529|gb|ACU49216.1| sugar isomerase, KpsF/GutQ [Brucella microti CCM 4915]
 gi|260097539|gb|EEW81413.1| KpsF/GutQ family protein [Brucella abortus NCTC 8038]
 gi|260151874|gb|EEW86967.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. 16M]
 gi|260669844|gb|EEX56784.1| KpsF/GutQ family protein [Brucella abortus bv. 4 str. 292]
 gi|260673191|gb|EEX60012.1| KpsF/GutQ family protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260677212|gb|EEX64033.1| KpsF/GutQ family protein [Brucella abortus bv. 6 str. 870]
 gi|260872441|gb|EEX79510.1| KpsF/GutQ family protein [Brucella abortus bv. 9 str. C68]
 gi|260917189|gb|EEX84050.1| KpsF/GutQ family protein [Brucella abortus bv. 3 str. Tulya]
 gi|261739591|gb|EEY27517.1| KpsF/GutQ family protein [Brucella suis bv. 5 str. 513]
 gi|261742833|gb|EEY30759.1| KpsF/GutQ family protein [Brucella suis bv. 3 str. 686]
 gi|262764334|gb|EEZ10366.1| KpsF/GutQ family protein [Brucella melitensis bv. 3 str. Ether]
 gi|263000104|gb|EEZ12794.1| KpsF/GutQ family protein [Brucella melitensis bv. 1 str. Rev.1]
          Length = 333

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|157372595|ref|YP_001480584.1| D-arabinose 5-phosphate isomerase [Serratia proteamaculans 568]
 gi|157324359|gb|ABV43456.1| KpsF/GutQ family protein [Serratia proteamaculans 568]
          Length = 328

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 196/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLQIERDGLAQLDQYINAD----FTRACELIAECTGKVVVMGMGKSGHIGCKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH AEASHGDLGM++  D+++ +S SG S+E++A++   +R  IPLI +
Sbjct: 70  TFASTGTPSFFVHPAEASHGDLGMVSAQDIVLAISNSGESNEIQALIPVLKRQQIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPESSMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRRLLLRVSDIMHSGDEIPHVSADASLRDALLEITRKNLGMTVICDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    +LN   + DVM      +  + L   A+ L++Q +I+ ++V D
Sbjct: 250 AGIFTDGDLRRIFDMGINLNEARIVDVMTLGGVRVRPNLLAVDALNLMQQRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|91791858|ref|YP_561509.1| KpsF/GutQ family protein [Shewanella denitrificans OS217]
 gi|91713860|gb|ABE53786.1| KpsF/GutQ family protein [Shewanella denitrificans OS217]
          Length = 325

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 136/325 (41%), Positives = 199/325 (61%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N   Q   + I  EK  L  L   +    S  F  A E I   KG+V++ G+GKSGHIG
Sbjct: 4   QNQWRQWGCKVIDIEKAALEHLYQFVD---SDAFSQACELILQCKGKVIVMGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG + ++D+I+ +S SG S E+  +L   +R  +
Sbjct: 61  NKISATLASTGTPAFFVHPGEASHGDLGALAKEDIILAISNSGESSEILTLLPVIQRMGV 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAIT + +S +A  A I L +    E+CP GLAPT+S    L +GDALA+ALL+++ F
Sbjct: 121 PVIAITGKPESNMAKLAKIHLCIQVPEEACPLGLAPTSSTTATLVMGDALAVALLQAKGF 180

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +++DF + HPGG LG    +  SDVMH  D +P V     + +A+  +S+K  G  AVVD
Sbjct: 181 TQDDFALSHPGGSLGRKLLLKVSDVMHQDDRLPCVPHDICITEALYEISKKGLGMTAVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             Q L GI T+GD+ R      +L T  +E VM KN        L   A+Q++   NI+ 
Sbjct: 241 ANQCLVGIFTDGDLRRVIDAEVNLRTTPIEQVMTKNCVTTTAGILAAQALQVMESKNING 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VV++ Q+ IG ++ LD+++ G+I
Sbjct: 301 LIVVNEQQQPIGALNMLDMVKAGVI 325


>gi|90422289|ref|YP_530659.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18]
 gi|90104303|gb|ABD86340.1| KpsF/GutQ family protein [Rhodopseudomonas palustris BisB18]
          Length = 337

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 163/332 (49%), Positives = 225/332 (67%), Gaps = 1/332 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
               +   +      +  ALR++ AE  G+++L ++L+ +L   F  A   I   KGR++
Sbjct: 6   PRSAKSSMTDQATDAIASALRTLEAEADGVTALAAALKSDLGPAFVAAANLITNAKGRLI 65

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TG+GKSGHIG K+A+T ASTGTP+FFVHAAEASHGDLGMIT DD+I+ +SWSG   E+K
Sbjct: 66  VTGLGKSGHIGRKVAATFASTGTPAFFVHAAEASHGDLGMITPDDVILAMSWSGEQPEMK 125

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++ YA+RF I LIA++++  S +   AD+ L LPK  E+CPH LAPTTS++M LA+GDA
Sbjct: 126 NLITYAKRFKIALIAMSADGDSTLGQAADVSLILPKAREACPHNLAPTTSSVMLLALGDA 185

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LAIALLE R F+  DF VLHPGGKLG +   A D+MHSGD+IPL  +G  + DA+  +S 
Sbjct: 186 LAIALLEGRGFTSIDFSVLHPGGKLGAMLKFARDLMHSGDAIPLRPLGTKMSDALVEMSS 245

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K FGCV +VD    + GI+T+GD+ R+   DL T  V++VM KNPK I    L +  +++
Sbjct: 246 KGFGCVGIVDSRGLVVGIVTDGDLRRHMRADLMTALVDEVMTKNPKTISPSLLASETLEI 305

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L    I+ L+V  + +K +GIVH  DLLR G+
Sbjct: 306 LNSSKITALIVT-EGKKPVGIVHLHDLLRAGV 336


>gi|306841148|ref|ZP_07473864.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO2]
 gi|306288774|gb|EFM60092.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO2]
          Length = 333

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 236/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK+G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKMGTPMPDAMKVLAQKSFGCVIVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN +++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLNRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|163758868|ref|ZP_02165955.1| putative arabinose 5-phosphate isomerase [Hoeflea phototrophica
           DFL-43]
 gi|162284158|gb|EDQ34442.1| putative arabinose 5-phosphate isomerase [Hoeflea phototrophica
           DFL-43]
          Length = 346

 Score =  355 bits (911), Expect = 6e-96,   Method: Composition-based stats.
 Identities = 176/320 (55%), Positives = 229/320 (71%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +  A R+I  E+ GL +L ++L+  LS  F  AVE + +I GRV++TG+GKSGH+G+
Sbjct: 26  EEILGSAGRTIQTERTGLDALAAALENGLSEPFVRAVEALGSISGRVIVTGVGKSGHVGA 85

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPS FVH AEA+HGDLGMITRDD IIVLSWSG + ELK IL Y+RRF IP
Sbjct: 86  KIAATLASTGTPSQFVHPAEANHGDLGMITRDDAIIVLSWSGETAELKGILAYSRRFQIP 145

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA TS + S +A  ADIVL LP+E E+CPHGLAPTTS +MQLA+GDALA+ALLES+ F+
Sbjct: 146 LIAFTSGSSSTLAREADIVLGLPREQEACPHGLAPTTSTLMQLALGDALAVALLESKGFT 205

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF+  HPGG+LG      +DVMH+G ++PLV  G    DA+  LSE++FGCV V D  
Sbjct: 206 AGDFHTFHPGGQLGANLAHVADVMHTGGAVPLVPSGTLAPDAVMTLSERKFGCVGVTDAS 265

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GD+ RN  K+L    ++ +M +NPK I    L + AM +L ++ I  L+V 
Sbjct: 266 GCLIGIVTDGDVARNLGKNLVDQPIDAIMTRNPKTIAPTALASTAMAILNKNAIGALIVT 325

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+ Q  +GIVHF DLLR G+
Sbjct: 326 DENQMPLGIVHFHDLLRIGV 345


>gi|227820787|ref|YP_002824757.1| sugar isomerase, KpsF/GutQ family protein [Sinorhizobium fredii
           NGR234]
 gi|227339786|gb|ACP24004.1| sugar isomerase, KpsF/GutQ family protein [Sinorhizobium fredii
           NGR234]
          Length = 336

 Score =  355 bits (911), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 158/335 (47%), Positives = 224/335 (66%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            + V  +GHS   ++ +    R++     G+ +L   L      +     AVE +    G
Sbjct: 3   LRHVKGEGHS--PSAILDSIGRTLTTASNGIKALAEHLATDESFAQSLVEAVELVGDGHG 60

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGM+T DD++I+LSWSG + 
Sbjct: 61  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETA 120

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I+S   S++A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 121 ELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 180

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H  D +PL+ +G P+ +A+  
Sbjct: 181 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHVADQMPLLVVGRPMSEAVIE 240

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V +VDEG  L G+IT+GD+ R+   DL    VE+VM  +PKVI  D L + A
Sbjct: 241 MSAKGFGVVGIVDEGGVLVGVITDGDLRRHMAGDLLGQPVEEVMSCHPKVIQADVLASAA 300

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ +++H ++VL +VD+     GI+H  DLLR G+
Sbjct: 301 MEFMQEHKVTVLFLVDETGMPEGILHIHDLLRAGV 335


>gi|291326549|ref|ZP_06124963.2| arabinose 5-phosphate isomerase [Providencia rettgeri DSM 1131]
 gi|291313515|gb|EFE53968.1| arabinose 5-phosphate isomerase [Providencia rettgeri DSM 1131]
          Length = 326

 Score =  354 bits (910), Expect = 7e-96,   Method: Composition-based stats.
 Identities = 132/328 (40%), Positives = 196/328 (59%), Gaps = 9/328 (2%)

Query: 18  LMKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
            M N   Q      +  E  GL +LE  +  +    F  A + I   +G+VV+ G+GKSG
Sbjct: 4   EMSNFDFQKVGKEVLHIEHEGLKNLEQYINTD----FDNACQLIFNCEGKVVVMGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A+TLASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R
Sbjct: 60  HIGRKIAATLASTGTPSFFVHPGEASHGDLGMITHKDVVLAISNSGESGEILALLPVLKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI +T+  +S +  +AD+ L +    E+CP GLAPTTS    L +GDALAIALL +
Sbjct: 120 IKVPLICMTNNPESNMGKYADVHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ NDF + HPGG LG    +   D+M++GD IP +     L +A+  ++ K+ G   
Sbjct: 180 RGFTANDFALSHPGGALGRKLLLLVRDLMNTGDEIPHIPKSASLREALVEITRKKLGMTV 239

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + D+   ++GI T+GD+ R F    DLN   + D+M      +    L   A+ L++  +
Sbjct: 240 ICDDDMNIEGIFTDGDLRRIFDMGIDLNNAKIADLMTPGGIRVSPTMLAVEALNLMQSRH 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ L+V +D  K +G++H  DLL+ G++
Sbjct: 300 VTSLLVAND-NKLVGVLHMHDLLQAGVV 326


>gi|16766610|ref|NP_462225.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56415244|ref|YP_152319.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|167994508|ref|ZP_02575599.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243151|ref|ZP_02668083.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168262672|ref|ZP_02684645.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168819615|ref|ZP_02831615.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446312|ref|YP_002042573.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194448372|ref|YP_002047344.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197264842|ref|ZP_03164916.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197364174|ref|YP_002143811.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198244781|ref|YP_002217286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204931212|ref|ZP_03222006.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205354216|ref|YP_002228017.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858563|ref|YP_002245214.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|238910109|ref|ZP_04653946.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|37079531|sp|Q8ZLS1|KDSD_SALTY RecName: Full=Arabinose 5-phosphate isomerase
 gi|16421872|gb|AAL22184.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
 gi|56129501|gb|AAV79007.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|194404975|gb|ACF65197.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194406676|gb|ACF66895.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|197095651|emb|CAR61219.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197243097|gb|EDY25717.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197939297|gb|ACH76630.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|204319979|gb|EDZ05185.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205273997|emb|CAR39003.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|205327614|gb|EDZ14378.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337836|gb|EDZ24600.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205343485|gb|EDZ30249.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348384|gb|EDZ35015.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206710366|emb|CAR34724.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|261248480|emb|CBG26317.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. D23580]
 gi|267995514|gb|ACY90399.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159864|emb|CBW19383.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312914342|dbj|BAJ38316.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087760|emb|CBY97524.1| putative isomerase [Salmonella enterica subsp. enterica serovar
           Weltevreden str. 2007-60-3289-1]
 gi|321225261|gb|EFX50320.1| Arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|332990173|gb|AEF09156.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 328

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|82778511|ref|YP_404860.1| D-arabinose 5-phosphate isomerase [Shigella dysenteriae Sd197]
 gi|309785525|ref|ZP_07680156.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
 gi|81242659|gb|ABB63369.1| putative isomerase [Shigella dysenteriae Sd197]
 gi|308926645|gb|EFP72121.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
          Length = 328

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPSILAVEALNLMQFRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G++H  DLLR G++
Sbjct: 310 GD-HLLGVLHMHDLLRAGVV 328


>gi|256059680|ref|ZP_05449875.1| sugar isomerase, KpsF/GutQ [Brucella neotomae 5K33]
 gi|261323651|ref|ZP_05962848.1| KpsF/GutQ family protein [Brucella neotomae 5K33]
 gi|261299631|gb|EEY03128.1| KpsF/GutQ family protein [Brucella neotomae 5K33]
          Length = 333

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGVSLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|254720676|ref|ZP_05182487.1| sugar isomerase, KpsF/GutQ [Brucella sp. 83/13]
 gi|265985726|ref|ZP_06098461.1| KpsF/GutQ family protein [Brucella sp. 83/13]
 gi|306839373|ref|ZP_07472189.1| sugar isomerase, KpsF/GutQ family [Brucella sp. NF 2653]
 gi|264664318|gb|EEZ34579.1| KpsF/GutQ family protein [Brucella sp. 83/13]
 gi|306405621|gb|EFM61884.1| sugar isomerase, KpsF/GutQ family [Brucella sp. NF 2653]
          Length = 333

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 169/319 (52%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLV  G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVTTGTPMPDAMKVLAQKSFGCVIVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN +++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLNRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|325273319|ref|ZP_08139591.1| KpsF/GutQ family protein [Pseudomonas sp. TJI-51]
 gi|324101552|gb|EGB99126.1| KpsF/GutQ family protein [Pseudomonas sp. TJI-51]
          Length = 324

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 137/325 (42%), Positives = 197/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R++  E   +  L + +       F  A E I A +GRVV+ G+GKSGHIG
Sbjct: 4   SSELIQSAQRTVRLELEAVEGLLARI----DEHFVKACELILASQGRVVVLGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH AEASHGD+GMIT +D+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTPAFFVHPAEASHGDMGMITGNDIILALSNSGSTAEIVTLLPLVKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T    S +A  A++ L      E+CP  LAPT+S    L +GDALAIALLE+R F
Sbjct: 120 TLISLTGNPDSTLAQAAEVNLDARVAQEACPLNLAPTSSTTAALVLGDALAIALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +    VMHSGD +P V  G  L DA+  +S K  G  AV++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVEHVMHSGDQLPKVLRGTLLKDALLEMSRKGLGMTAVLE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              KL GI T+GD+ R+  +  D++T  ++ VM  + K    + L   A++++  + I+ 
Sbjct: 240 ADGKLAGIFTDGDLRRSLDRNIDVHTTLIDHVMTVHGKTARAEMLAAEALKIMEDNKINA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   +  G ++  DLLR G++
Sbjct: 300 LVVVDQDDRPTGALNMHDLLRAGVM 324


>gi|168231926|ref|ZP_02656984.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|194470546|ref|ZP_03076530.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197250012|ref|YP_002148240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|194456910|gb|EDX45749.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|197213715|gb|ACH51112.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|205333900|gb|EDZ20664.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|322615319|gb|EFY12240.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322618322|gb|EFY15213.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622873|gb|EFY19717.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322626805|gb|EFY23602.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322631374|gb|EFY28134.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635359|gb|EFY32073.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322643358|gb|EFY39922.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322647070|gb|EFY43571.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322648873|gb|EFY45318.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655065|gb|EFY51376.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322657668|gb|EFY53936.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664164|gb|EFY60362.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322667447|gb|EFY63609.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674695|gb|EFY70787.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322675672|gb|EFY71745.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682308|gb|EFY78331.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322684911|gb|EFY80909.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195884|gb|EFZ81055.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199001|gb|EFZ84098.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204299|gb|EFZ89308.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323207646|gb|EFZ92593.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323211301|gb|EFZ96145.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323214757|gb|EFZ99506.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221237|gb|EGA05663.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323224022|gb|EGA08315.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230329|gb|EGA14448.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323233305|gb|EGA17399.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323239342|gb|EGA23392.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242407|gb|EGA26433.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323246917|gb|EGA30883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323254150|gb|EGA37970.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255267|gb|EGA39044.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323262730|gb|EGA46286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264040|gb|EGA47548.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269426|gb|EGA52881.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 328

 Score =  354 bits (910), Expect = 8e-96,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|225685940|ref|YP_002733912.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis ATCC
           23457]
 gi|256261847|ref|ZP_05464379.1| KpsF/GutQ family protein [Brucella melitensis bv. 2 str. 63/9]
 gi|225642045|gb|ACO01958.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis ATCC
           23457]
 gi|263091323|gb|EEZ15859.1| KpsF/GutQ family protein [Brucella melitensis bv. 2 str. 63/9]
 gi|326410260|gb|ADZ67324.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis M28]
 gi|326553553|gb|ADZ88192.1| sugar isomerase, KpsF/GutQ family protein [Brucella melitensis
           M5-90]
          Length = 333

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKIENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|161620163|ref|YP_001594049.1| KpsF/GutQ family sugar isomerase [Brucella canis ATCC 23365]
 gi|260568587|ref|ZP_05839056.1| KpsF/GutQ family protein [Brucella suis bv. 4 str. 40]
 gi|161336974|gb|ABX63278.1| sugar isomerase, KpsF/GutQ family [Brucella canis ATCC 23365]
 gi|260155252|gb|EEW90333.1| KpsF/GutQ family protein [Brucella suis bv. 4 str. 40]
          Length = 333

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 170/319 (53%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
               + IG+VHF DLLR G
Sbjct: 314 -KANRPIGLVHFHDLLRIG 331


>gi|16762077|ref|NP_457694.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143566|ref|NP_806908.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|213053150|ref|ZP_03346028.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426642|ref|ZP_03359392.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586480|ref|ZP_03368306.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213648392|ref|ZP_03378445.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|289825825|ref|ZP_06544993.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|37079514|sp|Q8Z3G6|KDSD_SALTI RecName: Full=Arabinose 5-phosphate isomerase
 gi|25303286|pir||AB0905 conserved hypothetical protein STY3494 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16504380|emb|CAD07832.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29139201|gb|AAO70768.1| conserved hypothetical protein [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
          Length = 328

 Score =  354 bits (910), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 190/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|306845306|ref|ZP_07477881.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO1]
 gi|306274222|gb|EFM56034.1| sugar isomerase, KpsF/GutQ family [Brucella sp. BO1]
          Length = 333

 Score =  354 bits (909), Expect = 9e-96,   Method: Composition-based stats.
 Identities = 169/319 (52%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLV  G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVTTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|271498867|ref|YP_003331892.1| KpsF/GutQ family protein [Dickeya dadantii Ech586]
 gi|270342422|gb|ACZ75187.1| KpsF/GutQ family protein [Dickeya dadantii Ech586]
          Length = 328

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 191/319 (59%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              + +  E+  L+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T
Sbjct: 15  AGRQVLSIERDSLAQLDQYI----DDNFSRACEKMFYCHGKVVVMGMGKSGHIGCKMAAT 70

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI +T
Sbjct: 71  FASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLICMT 130

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 131 GNPESTMAKAADIHLCVHVSQEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFA 190

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   +     +++
Sbjct: 191 LSHPGGALGRKLLLRINDIMHTGDEIPRVGQDASLRDALLEITRKNLGMTVICSPDDRIE 250

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R F    DLN+  + DVM +    +   TL   A+ L++  +I+ L+V  +
Sbjct: 251 GIFTDGDLRRVFDMNIDLNSAGIADVMTRGGIRVTPQTLAVDALNLMQSRHITSLLVA-E 309

Query: 323 CQKAIGIVHFLDLLRFGII 341
             + +GIVH  D+LR G++
Sbjct: 310 GDRLLGIVHMHDMLRAGVV 328


>gi|307129068|ref|YP_003881084.1| D-Arabinose 5-phosphate isomerase [Dickeya dadantii 3937]
 gi|306526597|gb|ADM96527.1| D-Arabinose 5-phosphate isomerase [Dickeya dadantii 3937]
          Length = 328

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
               + +  E+  L+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  TAGRQVLSIERDSLAQLDQYI----DDNFSRACEKMFYCHGKVVVMGMGKSGHIGCKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGMIT  D++I +S SG S E+ A++   +R  + LI +
Sbjct: 70  TFASTGTPAFFVHPGEASHGDLGMITAQDIVIAISNSGESHEILALIPVLKRLQVCLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGNPESTMAKAADIHLCVHVSQEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   +     ++
Sbjct: 190 ALSHPGGALGRKLLLRINDIMHTGDEIPRVGRDASLRDALLEITRKNLGMTVICGPDDRI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    DLN+  + DVM +    +   TL   A+ L++  +I+ L+V +
Sbjct: 250 EGIFTDGDLRRVFDMNIDLNSAGIADVMTRGGIRVTPQTLAVDALNLMQSRHITSLLVAE 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  +  GIVH  D+LR G++
Sbjct: 310 DD-RLRGIVHMHDMLRAGVV 328


>gi|291612912|ref|YP_003523069.1| KpsF/GutQ family protein [Sideroxydans lithotrophicus ES-1]
 gi|291583024|gb|ADE10682.1| KpsF/GutQ family protein [Sideroxydans lithotrophicus ES-1]
          Length = 353

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 140/322 (43%), Positives = 197/322 (61%), Gaps = 7/322 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A + +  E   + +L   +       F  A+  I A KGRV+++G+GKSGHI  K+
Sbjct: 36  ALDLARQVLGIEADAVRALTQRI----DDNFLHALNLILACKGRVIVSGMGKSGHIARKI 91

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T++STGTP++FVH  EASHGDLGM+T  D++I LS+SG S+EL  I+   +R    LI
Sbjct: 92  AATMSSTGTPAYFVHPGEASHGDLGMVTAQDVVIALSYSGESEELLTIVPAIKRQGAHLI 151

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           ++T   +S +A  AD+ L      E+CP GLAPT S    LA+GDALA+ALL+++ F E 
Sbjct: 152 SLTGNPRSSLALAADVHLDGSVAQEACPMGLAPTASTTAALALGDALAVALLDAKGFGEE 211

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG        D+MHS  SIP V+ G  L DA+  +S K  G  A+VD+ +
Sbjct: 212 DFARSHPGGSLGRRLLTRVRDIMHSNASIPSVREGATLADAVLEISRKGLGMTAIVDDHK 271

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L GI T+GD+ R   K  D +T  V  VM KNP+ I  D L   A+QL+ ++NIS L V
Sbjct: 272 RLLGIYTDGDLRRTLEKKLDFSTTLVSTVMSKNPRNIGPDELAVDAVQLMEKYNISQLPV 331

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD  +K +G ++  DLL+  +I
Sbjct: 332 VDADKKLVGALNMHDLLKAKVI 353


>gi|304396323|ref|ZP_07378204.1| KpsF/GutQ family protein [Pantoea sp. aB]
 gi|304355832|gb|EFM20198.1| KpsF/GutQ family protein [Pantoea sp. aB]
          Length = 327

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F  A   I A +G+VV+ G+GKSGHIG K+A+
Sbjct: 13  QAGKTVLRIEREGLEQLDQYINDD----FARACALIYACQGKVVVMGMGKSGHIGKKMAA 68

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM++++D++I +S SG S E+ A++   +R  I LI I
Sbjct: 69  TFASTGTPAFFVHPAEASHGDLGMVSKNDVVIAISNSGESSEILALIPVLKRQHISLICI 128

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +   AD+ L +    E+CP GLAPT+S    L +GDALA++LLE+R F+  DF
Sbjct: 129 TGRPDSAMGRVADVHLCVHVPQEACPLGLAPTSSTTATLVMGDALAVSLLEARGFTAEDF 188

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MHSGD +P V     L DA+  ++ K  G   +VD   K+
Sbjct: 189 ALSHPGGALGRKLLLHVADIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDGLMKI 248

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D    ++ +VM      +  + L   A+ L++  NI+ ++V D
Sbjct: 249 EGIFTDGDLRRIFDMGIDFQRATIGEVMTPGGIRVRPNMLAVEALNLMQTKNITSILVAD 308

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D  + +G+VH  D+LR G++
Sbjct: 309 DD-RLLGVVHMHDMLRAGVV 327


>gi|254247192|ref|ZP_04940513.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
 gi|124871968|gb|EAY63684.1| KpsF/GutQ [Burkholderia cenocepacia PC184]
          Length = 413

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 94  DRALALARDVLDIEADAVRALRDQLDG----GFVQAVALLLGCRGRVVVSGIGKSGHIAR 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 150 KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT    S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 210 LIAITGRAGSSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 269

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM SGD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 270 SEDFARSHPGGALGRRLLTYVRDVMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDA 329

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GI T+GD+ R   +  D  TL + +VM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 330 DGKVAGIFTDGDLRRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQM 389

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 390 LVVDADGALIGALNMHDLFSKKVI 413


>gi|319404609|emb|CBI78215.1| sugar isomerase [Bartonella rochalimae ATCC BAA-1498]
          Length = 331

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 180/330 (54%), Positives = 227/330 (68%), Gaps = 1/330 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
             +  ++L   + V  AL++I  EKRGL  LE + Q +L+  F  AV+ I    G VVIT
Sbjct: 2   TIQSSNTLNLQNAVILALKTISIEKRGLEVLEKAFQEKLADSFKAAVQAISNANGHVVIT 61

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+I+ LSWSG + EL  I
Sbjct: 62  GLGKSGHIGTKIAATLASTGTPAFFIHAAEANHGDLGMICSDDVILALSWSGETTELSGI 121

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + +A RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL IGDALA
Sbjct: 122 ISHAARFRIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTTSTTMQLVIGDALA 181

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLE R F+  DF + HPGG LG       D+MH GD +PLV  G P+  A+ IL EK 
Sbjct: 182 IALLEMRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVTQGVPMTAAMEILVEKH 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   + 
Sbjct: 242 FGCVGVVNPRGELIGIITDGDLARNIHNDLSQFNVDEVMTKNPKTVGPDTLVGAATAFIN 301

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            H+I    V+ + +K IGIVHF DLLR G+
Sbjct: 302 DHHIGAFFVI-ENKKPIGIVHFHDLLRIGV 330


>gi|90415754|ref|ZP_01223688.1| hypothetical protein GB2207_10561 [marine gamma proteobacterium
           HTCC2207]
 gi|90333077|gb|EAS48247.1| hypothetical protein GB2207_10561 [marine gamma proteobacterium
           HTCC2207]
          Length = 323

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 144/327 (44%), Positives = 207/327 (63%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + +  A R+I  E   ++ L    Q  L   F  A E + A +GRV++TG+GKSGH
Sbjct: 1   MTATNFITSAQRTIKMEADAVAEL----QHRLDDSFVTACETMLACEGRVIVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTGTPSFFVH  EASHGDLGMIT++D++IV+S SGS+ E+  IL   +R 
Sbjct: 57  IGNKIAATLASTGTPSFFVHPGEASHGDLGMITKNDVVIVISNSGSTAEVITILPLIKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+I++T +  SV++  A   L +    E+CP  LAPTTS  + LA+GDALAIALLESR
Sbjct: 117 GIPMISMTGDPGSVLSQAARANLDVSVTSEACPLNLAPTTSTTVTLAMGDALAIALLESR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HPGG LG    +  +D+MH    +P V    PL  A+ +++EK FG   V
Sbjct: 177 GFTAEDFAFSHPGGALGRKLLLRVADIMHKDVEVPRVLTSEPLHQALLVMTEKGFGMTTV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V +  KL G+ T+GD+ R      D+N +++ DVM  NPK I  + L   A++++   +I
Sbjct: 237 VSDENKLLGVFTDGDLRRIVDAKVDINNVTMADVMSPNPKTINGEILAAQALKIMEDGSI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V D+ Q  IG++H  D+LR G++
Sbjct: 297 TALIVEDEHQSPIGVLHMHDILRAGVM 323


>gi|225024071|ref|ZP_03713263.1| hypothetical protein EIKCOROL_00939 [Eikenella corrodens ATCC
           23834]
 gi|224943096|gb|EEG24305.1| hypothetical protein EIKCOROL_00939 [Eikenella corrodens ATCC
           23834]
          Length = 324

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 149/327 (45%), Positives = 210/327 (64%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   +  A   +  E   L +L  SL G     F  A E + A +GRVV++GIGKSGH
Sbjct: 2   MSEQQYLAHAREVLAIEADALRALSDSLDG----SFSRACEAVLACEGRVVVSGIGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+  IL   +R 
Sbjct: 58  IGRKIAATLASTGTPAFFVHPAEAAHGDLGMIVDGDVVLAISNSGESDEIAVILPALKRK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +I LI +T   +S +A HADI LT+    E+CP GLAPT+S    LA+GDALA+ALL +R
Sbjct: 118 NITLIGMTGRPESTLARHADIHLTVAVPQEACPLGLAPTSSTTAALALGDALAVALLRAR 177

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HP G LG  L +  +DVMHSGD +P+V++  P  D I  +SEK  G VAV
Sbjct: 178 AFTPDDFALSHPAGSLGKRLLLQVADVMHSGDELPVVRLDTPFADLIVCMSEKGLGMVAV 237

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            DE   LKGI T+GD+ R F   +DL+ L+ + VM  +PK I  + L T A++ ++Q+ +
Sbjct: 238 ADEAGYLKGIFTDGDLRRLFQQQRDLSGLTAQAVMGAHPKTITPNRLATEALKTMQQNRV 297

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L V D+  + +G ++  DLL+  I+
Sbjct: 298 NGLPVCDEAGRLLGALNMHDLLKARIV 324


>gi|27382857|ref|NP_774386.1| capsule expression protein [Bradyrhizobium japonicum USDA 110]
 gi|27356030|dbj|BAC53011.1| capsule expression protein [Bradyrhizobium japonicum USDA 110]
          Length = 370

 Score =  354 bits (909), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 156/319 (48%), Positives = 220/319 (68%), Gaps = 1/319 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           ++V+ ALR++  E  G+++L ++L+G L   F  AV+ I+  KGRV++TG+GKSGH+G K
Sbjct: 52  ASVESALRTLETESGGINALAAALRGPLGATFAKAVDMIRQAKGRVIVTGLGKSGHMGRK 111

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH AEA+HGDLGMIT DD+I+ LSWSG   E+K ++ Y+ RF+IP+
Sbjct: 112 IAATLASTGTPAFFVHTAEAAHGDLGMITADDVIMALSWSGEQPEMKTLVNYSARFAIPM 171

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +   AD+V+ LPK  E+CPH LAPTTS +MQ AIGDALAIALLE R F+ 
Sbjct: 172 IAVTSNAASSLGQAADLVIELPKAREACPHNLAPTTSTLMQAAIGDALAIALLEGRGFTA 231

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGGKLG +     D M +G  IP+   G  + +A+  +S K  GCV +V++  
Sbjct: 232 LEFAHFHPGGKLGAMLKFVRDYMRTGAEIPVKPEGTKMSEAVVEMSAKGLGCVCIVNDAN 291

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +  GIIT+GD+ R+   DL T+SV+D+M + PK +    L T  +++L    I+ L+V  
Sbjct: 292 EAVGIITDGDLRRHMRPDLLTVSVDDIMTRQPKSVPPSMLATEMIEVLNTRKITTLLVT- 350

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  K +GIVH  DLLR G+
Sbjct: 351 EAGKVVGIVHLHDLLRAGV 369


>gi|332994375|gb|AEF04430.1| arabinose 5-phosphate isomerase [Alteromonas sp. SN2]
          Length = 324

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 132/325 (40%), Positives = 200/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +NS +  A R I  E + +S+L S +  +    F  A   ++   G+VV+ G+GKSGHIG
Sbjct: 4   ENSFITSAKRVIEIEAQAISALSSRMNDD----FVTACNLLQNCVGKVVVCGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA+HGDLGM+++ D+++ +S SG + EL  +L   +R ++
Sbjct: 60  HKIAATLASTGTPSFFMHPGEANHGDLGMLSKGDVLLAISNSGETAELVNLLPIVKRLNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T+   S +  HAD+VL +  E E+C  GLAPT+S    L +GDALA+ALL+ + F
Sbjct: 120 PVIAMTNSVTSSLGQHADVVLNISVEKEACSLGLAPTSSTTATLVMGDALAVALLDRKGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HPGG LG    +  SD+M +G  +PLV     + +A+  +S+K  G   V+D
Sbjct: 180 TSDDFALSHPGGSLGRKLLLKVSDIMLTGSELPLVDENALVAEALLEISKKGLGMTGVID 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R      DL+T +V  VM K  K  + + L   A+ ++  H IS 
Sbjct: 240 SDGVLVGIFTDGDLRRILDARIDLHTATVTQVMTKGGKTTMPEQLAVEALNVMETHKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           LMV DD +K +G  +   LL+ G++
Sbjct: 300 LMVTDDARKPVGAFNMHMLLKAGVL 324


>gi|237809668|ref|YP_002894108.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
 gi|237501929|gb|ACQ94522.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
          Length = 324

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 201/320 (62%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A R +  E + +  L  +L      QF  A + +   KG+V++ G+GKSGHIG K+A+
Sbjct: 9   QSAERVLRLELQAIEGLFQTL----DEQFTQACQMLFHCKGKVIVMGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           + ASTGTP+FFVH  EASHGDLGMI+ +D++I +S SG S+E+ A+L   +R+ I LI +
Sbjct: 65  SFASTGTPAFFVHPGEASHGDLGMISSNDVVIAISNSGESNEILAVLPVMKRWGIKLICM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L L  E E+CP GLAPT+S    L +GDALA++LLE+R F+ NDF
Sbjct: 125 TSRPESTMAKEADIHLCLHVEQEACPLGLAPTSSTTATLVLGDALAVSLLEARGFTANDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH G+ IP V     + DA+  +S K  G  A++D+   L
Sbjct: 185 AMSHPGGALGRKLLLRNADIMHQGEQIPAVSDKASVSDALLEMSRKGLGMTAILDDTGTL 244

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   +  D++T S+  VM  N   +  + L+  +++L+++  I+ L+V+D
Sbjct: 245 AGIFTDGDLRRILDQQLDIHTTSITKVMTTNCITVPAEMLVAQSVKLMQERKINALIVLD 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              + +G  +  D+L+ G++
Sbjct: 305 KQHRPVGAFNMHDVLKAGVV 324


>gi|319781610|ref|YP_004141086.1| KpsF/GutQ family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317167498|gb|ADV11036.1| KpsF/GutQ family protein [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 333

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 172/333 (51%), Positives = 232/333 (69%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H  S+ +K   L + +++  ALR++  E+ G+ +L  +L+  L+  F  AVE I  I+GR
Sbjct: 2   HAGSLDKK--PLDRQASIASALRTVATEQAGVEALAEALENGLAAPFAQAVEMISGIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIGSK+A+TLASTGTP+FFVH AEA+HGDLGMI RDD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGSKIAATLASTGTPAFFVHPAEANHGDLGMIARDDAIIAMSWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  I+ Y+RRFSIPLIA+T+   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL +G
Sbjct: 120 LMGIVAYSRRFSIPLIAVTAGETSALARAADVVLLLPRAPEACPHGLAPTTSTLLQLVMG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG       ++MH GD +PLV  G  + DAI  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTQIREIMHVGDRLPLVVAGTGMQDAILEL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S K FGCVA+ D    L GIIT+GDI R+   +L  ++V+ VM + PK    DTL+  A+
Sbjct: 240 SRKGFGCVAITDVDGALVGIITDGDIRRHIGSNLLAMTVDQVMTRGPKTATPDTLVATAL 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           Q +    I+ LMVV + +K +G++H  DLLR G
Sbjct: 300 QTINNSAITSLMVV-EGRKPVGLIHLHDLLRIG 331


>gi|109896891|ref|YP_660146.1| KpsF/GutQ family protein [Pseudoalteromonas atlantica T6c]
 gi|109699172|gb|ABG39092.1| KpsF/GutQ family protein [Pseudoalteromonas atlantica T6c]
          Length = 323

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 127/327 (38%), Positives = 194/327 (59%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   +Q ALR +  E + +  L   +       F  A E +K  KG+VV+ G+GKSGH
Sbjct: 1   MSQQEYIQSALRVLEIEGQAIKQLSQYI----DDNFIAACELMKNCKGKVVVCGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++TLASTGTP+FF+H  EA+HGDLGM+T  D+++ +S SG + EL A+L   +R 
Sbjct: 57  IGHKISATLASTGTPAFFMHPGEANHGDLGMLTEQDVLLAISNSGETSELLALLPVVKRR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I +IA+++   S +  HAD+ L +  E E+C  GLAPT S    L +GDALA+ALL++R
Sbjct: 117 GIAIIAMSNNPASSLGKHADVNLCIKVEKEACSLGLAPTASTTATLVMGDALAVALLDAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG    +   D+M  GD +PLV     +  A+  +S K  G   +
Sbjct: 177 GFTPDDFALSHPGGALGRKLLLKLDDIMCQGDLMPLVGTTQTISQALLEISRKGLGMAGI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V +  +L GI T+GD+ R      D++T+S+E VM  N     ++TL    + ++++  I
Sbjct: 237 VGDDGRLLGIFTDGDLRRVLDARVDIHTVSIESVMTANCVTASQETLAAEVLNVMQKRKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           S L +VDD    +G ++   LL  G+I
Sbjct: 297 SSLFIVDDNHLPVGAINMQTLLSAGVI 323


>gi|254447270|ref|ZP_05060737.1| D-arabinose 5-phosphate isomerase [gamma proteobacterium HTCC5015]
 gi|198263409|gb|EDY87687.1| D-arabinose 5-phosphate isomerase [gamma proteobacterium HTCC5015]
          Length = 324

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 133/328 (40%), Positives = 199/328 (60%), Gaps = 8/328 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  +     A   I  E R ++ L   +  +    F  A E + A +GRV++TG+GKSGH
Sbjct: 1   MNADKVKALATAVIETENRAVADLVWRVDND----FVRACEIMIACEGRVIVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IGSK+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ +S SG + E+  IL   +R 
Sbjct: 57  IGSKIAATLASTGTPAFFVHPGEASHGDLGMITNRDVVLAISNSGETHEIVTILPLIKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLIA+T   KS ++  A++ + +  E E+CP  LAPT S    L +GDALA+ALLESR
Sbjct: 117 GVPLIAMTGNPKSKLSEMAEVHIDISVEQEACPLNLAPTASTTATLVMGDALAVALLESR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVA 255
            F+ +DF + HPGG LG    +  SD+MH   + IP V       +A+  +S K  G  A
Sbjct: 177 GFTASDFALSHPGGALGRRLLLHVSDIMHQQEEEIPRVLDNATFGEALVEMSTKGLGMTA 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +L+GI T+GD+ R   +DL+    ++ +VM +NP  I  + L   A++++ +  
Sbjct: 237 VVDADNRLQGIFTDGDLRRTLDRDLDLKATTIAEVMTRNPISIHPEMLAAEALKIMDERK 296

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L ++ +  K +G ++  DLLR G++
Sbjct: 297 INALAIIGEDDKVVGAINMHDLLRAGVM 324


>gi|294853100|ref|ZP_06793772.1| arabinose-5-phosphate isomerase [Brucella sp. NVSL 07-0026]
 gi|294818755|gb|EFG35755.1| arabinose-5-phosphate isomerase [Brucella sp. NVSL 07-0026]
          Length = 333

 Score =  354 bits (908), Expect = 1e-95,   Method: Composition-based stats.
 Identities = 169/319 (52%), Positives = 233/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F   VE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEVVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDSALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|298291853|ref|YP_003693792.1| KpsF/GutQ family protein [Starkeya novella DSM 506]
 gi|296928364|gb|ADH89173.1| KpsF/GutQ family protein [Starkeya novella DSM 506]
          Length = 338

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 145/317 (45%), Positives = 219/317 (69%), Gaps = 1/317 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +   R++  E  GL++L + + G+L      A   I+  +GRV++TG+GKSGHIG K+A+
Sbjct: 23  ESVRRTLSIEAEGLAALGALIDGDLGDAIERATLLIEGARGRVIVTGMGKSGHIGRKIAA 82

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ F+HAAEASHGDLGM+T DD+++ +SWSG + EL  +++YARRF++PL+A+
Sbjct: 83  TLASTGTPALFLHAAEASHGDLGMVTPDDVLLAISWSGETAELSDVVHYARRFAVPLLAM 142

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +   AD+ + LP+  E+CP+GLAPTTS ++QLA+GDALA+ LLE R FS +DF
Sbjct: 143 TSNAESTLGRAADVGMVLPRAEEACPNGLAPTTSTLLQLALGDALAVLLLERRGFSASDF 202

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            V HPGGKLG   +  +D+MH G  +PLV+ G P+ D +  ++ KRFGC  V+D+  +L 
Sbjct: 203 RVFHPGGKLGARLLKVADLMHQGTEMPLVRFGTPMSDVLIEITGKRFGCCGVLDDSGRLA 262

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+   DL     E VM ++P V+  + L + A+ L+ +  ++V+  V    
Sbjct: 263 GIVTDGDLRRHMSADLLAQPAEAVMTRSPLVVRPEDLASAALGLMNRRPVTVVFAV-AED 321

Query: 325 KAIGIVHFLDLLRFGII 341
             +GI+H  D+LR G++
Sbjct: 322 APVGILHIHDILRAGVL 338


>gi|150395419|ref|YP_001325886.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150026934|gb|ABR59051.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 334

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 153/330 (46%), Positives = 215/330 (65%), Gaps = 2/330 (0%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKGRVVIT 70
           R   +    + ++   R++     G+ +L   L      +     AVE +    GRVV++
Sbjct: 4   RHAKADAGGTVLESIGRTLATATNGIRALADHLSSDKTFADALVNAVELMGDGDGRVVVS 63

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +
Sbjct: 64  GVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANM 123

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L YA+RF +P+I+I+S  +S +A ++++ L LPK PE+CPHGLAPTTSA++QLAIGDALA
Sbjct: 124 LTYAKRFKVPIISISSNRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGDALA 183

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K 
Sbjct: 184 IALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHGAGQLPLLPVGRPMSEAVIEMSAKG 243

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FG V +VDE  KL G+IT+GD+ R+   DL    VED+M   P+V+  D L + AM+ + 
Sbjct: 244 FGVVGIVDESGKLIGVITDGDLRRHMAGDLLAQPVEDIMSHKPRVVSRDVLASAAMEFME 303

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +H I+VL +V D    +GI+H  DLLR G+
Sbjct: 304 EHKITVLFLVGDAGAPVGILHIHDLLRAGV 333


>gi|24375443|ref|NP_719486.1| carbohydrate isomerase KpsF/GutQ family protein [Shewanella
           oneidensis MR-1]
 gi|24350291|gb|AAN56930.1|AE015827_2 carbohydrate isomerase, KpsF/GutQ family [Shewanella oneidensis
           MR-1]
          Length = 325

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 207/327 (63%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGCKVIDIEKSALDNLYQYVD---SAEFAQACELILNCSGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T + +S +A  A I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPESTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAMAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG    +  S+VMH GD +PLVK    + DA+  +S+K  G  A+
Sbjct: 179 GFTRDDFAMSHPGGALGRKLLLKVSNVMHCGDDLPLVKHDICITDALYEISKKGLGMTAI 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + DVM +N   I E+ L   A+Q++   NI
Sbjct: 239 IDEQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSRNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D     +G ++ LD+++ G+I
Sbjct: 299 NGLIVIDKENHPVGALNMLDMVKAGVI 325


>gi|302185307|ref|ZP_07261980.1| KpsF/GutQ [Pseudomonas syringae pv. syringae 642]
          Length = 324

 Score =  354 bits (908), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTADAEMLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQNDRPVGAFNLQDLLRAGVM 324


>gi|212711085|ref|ZP_03319213.1| hypothetical protein PROVALCAL_02154 [Providencia alcalifaciens DSM
           30120]
 gi|212686253|gb|EEB45781.1| hypothetical protein PROVALCAL_02154 [Providencia alcalifaciens DSM
           30120]
          Length = 326

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL +LE  +  +    F  A ++I   +G+VV+ G+GKSGHIG K+A+
Sbjct: 12  KVGKEVLHIEREGLKNLEQYINHD----FDRACQQIFTCQGKVVVMGMGKSGHIGRKIAA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMIT  D+++ +S SG S E+ A+L   +R  +PLI +
Sbjct: 68  TLASTGTPSFFVHPGEASHGDLGMITNKDIVLAISNSGESGEILALLPVLKRIKVPLICM 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +  +AD+ L +    E+CP GLAPTTS    L +GDALAIALL +R F+ +DF
Sbjct: 128 TNNPDSNMGKYADVHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTARGFTADDF 187

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+M +GD +P +     L +A+  ++ K+ G   + D+  K+
Sbjct: 188 ALSHPGGALGRKLLLLVRDLMSTGDDVPHIPKSASLREALVEITRKKLGMTVICDDDMKI 247

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    DLN   + D+M      +    L   A+ L++  +++ L+V D
Sbjct: 248 QGIFTDGDLRRIFDMGIDLNNAKIADLMTPGGIRVAPGMLAVEALNLMQSRHVTSLLVAD 307

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLL+ G++
Sbjct: 308 GDQ-LVGVLHMHDLLQAGVV 326


>gi|320538918|ref|ZP_08038594.1| putative D-arabinose 5-phosphate isomerase [Serratia symbiotica
           str. Tucson]
 gi|320031078|gb|EFW13081.1| putative D-arabinose 5-phosphate isomerase [Serratia symbiotica
           str. Tucson]
          Length = 328

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 134/320 (41%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E  GL+ L+  +  +    F  A E I A +G+VV+ GIGKSGHIG K+A+
Sbjct: 14  QAGKEVLQIECEGLAQLDRYIDAD----FTRACETITACRGKVVVMGIGKSGHIGRKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  IPLI +
Sbjct: 70  TFASTGTSSFFVHPAEASHGDLGMVTAQDIVLAISNSGESNEILALIPVLKRQQIPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTPQDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MHSGD IP V     L DA+  ++ K  G   + ++   +
Sbjct: 190 ALSHPGGALGRRLLLRVNDIMHSGDEIPHVSTEASLRDALLEITHKNLGMTVICNDTMNI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    +LN   + D+M      +    L   A+ L++Q +I+ L+V D
Sbjct: 250 AGIFTDGDLRRVFDMGINLNDAKIIDIMTPGGVRVHPSMLAVDALNLMQQRHITALLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 310 GDQ-LLGVVHMHDMLRAGVV 328


>gi|290476797|ref|YP_003469708.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           bovienii SS-2004]
 gi|289176141|emb|CBJ82946.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           bovienii SS-2004]
          Length = 328

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 128/327 (39%), Positives = 194/327 (59%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K    Q   + +  E  GL+ LE  +  +    F  A E +   +G++++ G+GKSGH
Sbjct: 7   MSKIDFQQSGKKVLQVELDGLAELEQYINED----FSRACELMFGCEGKIIVMGMGKSGH 62

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG S+E+ A++   +R 
Sbjct: 63  IGRKIAATFASTGTPSFFVHPGEASHGDLGMVTSKDIVLTISNSGESNEIVALIPVLKRQ 122

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLI +T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R
Sbjct: 123 KVPLICMTNNPNSSMGKAADIHLCIKTPQEACPLGLAPTTSTTATLVMGDALAVALLQAR 182

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG   +  +  + +  D IP V     L +A+  ++ K+ G   +
Sbjct: 183 GFTAEDFALSHPGGTLGRKLLLLTSDLMTIGDDIPRVPYTATLREALVEITRKKLGMTVI 242

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D+  ++KGI T+GD+ R F    DLN  ++ DVM      I   TL   A+ L++  +I
Sbjct: 243 CDDDMQIKGIFTDGDLRRVFDMGIDLNHANISDVMTIGGVRIKPHTLAVDALNLMQSRHI 302

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V D   K +G++H  DLL+ G++
Sbjct: 303 TSLLVTDGD-KLLGVLHMHDLLQAGVV 328


>gi|238785097|ref|ZP_04629092.1| Arabinose 5-phosphate isomerase [Yersinia bercovieri ATCC 43970]
 gi|238713989|gb|EEQ06006.1| Arabinose 5-phosphate isomerase [Yersinia bercovieri ATCC 43970]
          Length = 319

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 5   QAGKQVLHIEREGLAQLDQYINDD----FSSACEAIFNCHGKVVVMGMGKSGHIGCKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 61  TFASTGTPAFFVHPAEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIKLICM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 121 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTQEDF 180

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +
Sbjct: 181 ALSHPGGALGRKLLLRISDIMHTGAEIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 240

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN+  + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 241 KGIFTDGDLRRVFDMGVDLNSAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVAD 300

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 301 GEQ-LLGVVHMHDMLRAGVV 319


>gi|313894626|ref|ZP_07828189.1| arabinose 5-phosphate isomerase [Veillonella sp. oral taxon 158
           str. F0412]
 gi|313440816|gb|EFR59245.1| arabinose 5-phosphate isomerase [Veillonella sp. oral taxon 158
           str. F0412]
          Length = 323

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 140/326 (42%), Positives = 195/326 (59%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A + +  E R +  L S L       F  AV  I A KGRVV TG+GKSGHIG K
Sbjct: 2   TILEQAAQVLHEEARAIEELSSRL----DHNFVNAVNMILACKGRVVCTGMGKSGHIGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    L
Sbjct: 58  IAATLASTGTPALFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  + +S +A ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+ 
Sbjct: 118 ICVVGKPESTLAKNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F V HPGG LG    +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE 
Sbjct: 178 ENFAVFHPGGSLGRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEE 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
             L G++T+GD+ R      +     VED+M   P+ I +D L   A+ L+ ++    I+
Sbjct: 238 GHLLGLVTDGDVRRGLDSGSNFLEWPVEDMMTVMPRTITKDKLAAEALHLMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD     +GIVH  DLLR GI+
Sbjct: 298 VLPVVDGNNVCLGIVHITDLLRRGIV 323


>gi|320157529|ref|YP_004189908.1| arabinose 5-phosphate isomerase [Vibrio vulnificus MO6-24/O]
 gi|319932841|gb|ADV87705.1| arabinose 5-phosphate isomerase [Vibrio vulnificus MO6-24/O]
          Length = 323

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 190/318 (59%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQY----FDEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAMAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +D+MH+G+ +P V     + DA+  +S+K  G  A+VD+   L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTGEQLPRVSPDALVRDALLEISQKGLGMTAIVDQDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+    
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLC-QD 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|307944457|ref|ZP_07659797.1| arabinose 5-phosphate isomerase [Roseibium sp. TrichSKD4]
 gi|307772206|gb|EFO31427.1| arabinose 5-phosphate isomerase [Roseibium sp. TrichSKD4]
          Length = 337

 Score =  353 bits (907), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 165/336 (49%), Positives = 226/336 (67%), Gaps = 1/336 (0%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
             +      +     +++ ++  A R++  E  GLS+L ++L+  L+  F   V  IK  
Sbjct: 1   MTTKTSETGQNELDDLQSRSLVSAERTLETEIAGLSALRAALKDSLAKPFADTVRLIKES 60

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KGRVV++GIGKSGHIG+KLA++LASTGTP+FFVHA+EASHGDLGMI  +D++I LSWSG 
Sbjct: 61  KGRVVVSGIGKSGHIGTKLAASLASTGTPAFFVHASEASHGDLGMIMENDVVIALSWSGE 120

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + EL  I+ YARRF +PL+A+TS   S +   AD+VL LPK  E+CPHGLAPTTSA+ QL
Sbjct: 121 TQELAGIVAYARRFKVPLVAVTSRLDSTLGRAADVVLNLPKVTEACPHGLAPTTSALAQL 180

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           A+GDALA+ALLESR+FS  DF V HPGGKLG     A D+MH G+++PLV    P+ + I
Sbjct: 181 AMGDALAVALLESRDFSAQDFRVFHPGGKLGASLTNARDIMHKGETLPLVNSSTPMREGI 240

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            ++++K FG + V DE   L GIIT+GD+ R+   D   L   ++M   PK I  D +  
Sbjct: 241 VLMTQKGFGALGVTDETGNLVGIITDGDLRRHISSDFLDLPASEIMTAGPKTIRSDMMAA 300

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++LL   +I+ + VV++ QK +GIVH  DLLR G
Sbjct: 301 AILELLNSSSITSVFVVEE-QKPVGIVHLHDLLRIG 335


>gi|269104094|ref|ZP_06156791.1| arabinose 5-phosphate isomerase [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163992|gb|EEZ42488.1| arabinose 5-phosphate isomerase [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 322

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 198/327 (60%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K       LR I  E   L+++   +  +    F  A E I    G+V++ G+GKSGH
Sbjct: 1   MPKFDFCANGLRVIETEIHALNNIRQYINQD----FANACELILNCSGKVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTGT +FFVH  EASHGDLGMI ++D++I +S SG + E+ A+L   +R 
Sbjct: 57  IGNKIAATLASTGTSAFFVHPGEASHGDLGMIKKNDVVIAISNSGEASEILALLPVIKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLIA+T + +S +A  A   L +  + E+CP  LAPT+S    L +GDALAIA++E+R
Sbjct: 117 GIPLIAMTGKPESSMAKLAQYHLQITVDKEACPLNLAPTSSTTATLVMGDALAIAIMEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ NDF + HPGG LG    +  SDVMHSGD +P+V     + DA+  +S K  G  A+
Sbjct: 177 GFTANDFALSHPGGALGRKLLMRISDVMHSGDDLPIVTEHATIKDALLEISRKGLGMTAI 236

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD  Q+L GI T+GD+ R    H D++  ++  VM +NPK I    L    ++L+    I
Sbjct: 237 VDNEQQLIGIFTDGDLRRLLDDHIDIHNTTIGTVMSRNPKTISPQLLAAEGLKLMEDKKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V  +    +G ++  DLL+ G+I
Sbjct: 297 NGLLVT-EQSCLVGALNMHDLLKAGVI 322


>gi|261855369|ref|YP_003262652.1| KpsF/GutQ family protein [Halothiobacillus neapolitanus c2]
 gi|261835838|gb|ACX95605.1| KpsF/GutQ family protein [Halothiobacillus neapolitanus c2]
          Length = 323

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 194/326 (59%), Gaps = 7/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  N+ +  A + I  E +   +L + L      QF  A E +    GRV++ G+GKSGH
Sbjct: 1   MNPNNLLAMAKQVIDIEAQACQALSARL----DHQFITACELMLKCDGRVIVIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVH  EASHGDLGMITR D+++ LS SG + E+ AIL   +R 
Sbjct: 57  IGGKIAATLASTGTPAFFVHPGEASHGDLGMITRRDVVLALSNSGETAEMLAILPVIKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             PL+A+T   +S +A  A+  L +  E E+CP  LAPT S    L +GDALA+ALL++R
Sbjct: 117 GTPLVALTGRPQSTLAKAAEAHLDVSVEREACPLNLAPTASTTAALVMGDALAVALLDAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   DF + HPGG LG    +   DVMH+GD IP V     +  A+ ++S    G   +
Sbjct: 177 AFQPEDFALSHPGGTLGRRLLLRVQDVMHTGDRIPRVMHNQTIKQALIVISSGGLGMTTI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VDE QKL G+ T+GD+ R   ++   L   +E VMI+NP+    D L   A+ ++ +  I
Sbjct: 237 VDEQQKLLGLFTDGDLRRILDQEEYDLNQPIERVMIRNPRTCTADKLAAEALAIMERDKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L+V D+    IG ++  DLLR G+
Sbjct: 297 NGLIVTDNQSHVIGALNMHDLLRAGV 322


>gi|188583481|ref|YP_001926926.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
 gi|179346979|gb|ACB82391.1| KpsF/GutQ family protein [Methylobacterium populi BJ001]
          Length = 341

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 154/327 (47%), Positives = 215/327 (65%), Gaps = 3/327 (0%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            + ++   +  ALR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKS
Sbjct: 15  EATVRAPAIASALRTIETEREGLACLMAAIDNGLGEPFARAVERIGAARGRVICTGMGKS 74

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+  K+A+T ASTGTP+ +VH AEASHGDLGMI  +D+++ LSWSG + EL  I+ Y R
Sbjct: 75  GHVARKIAATFASTGTPALYVHPAEASHGDLGMIQPEDVVLALSWSGETTELADIIGYTR 134

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R+ + L+AITS   S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE
Sbjct: 135 RYRVGLVAITSNAASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLE 194

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           +R FS  DF V HPGG+LG       +VMH G ++P+V +G  +  A+  +  K FG V 
Sbjct: 195 ARGFSARDFSVFHPGGRLGASLRQVREVMHGGANLPVVALGTAMRAAVAEIDAKGFGSVL 254

Query: 256 VVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD    L GI+T+GD+ R     + L+ + VE VM KNP+ I  +TLL  A+Q+     
Sbjct: 255 VVDAEGALAGILTDGDVRRAIFSREGLDRMPVEAVMTKNPRTITPETLLAKALQIQEAMK 314

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I+ L+VV +  + +G+VH+ DLLR G+
Sbjct: 315 ITALVVV-EDGRPVGLVHYHDLLRTGV 340


>gi|117919129|ref|YP_868321.1| KpsF/GutQ family protein [Shewanella sp. ANA-3]
 gi|117611461|gb|ABK46915.1| KpsF/GutQ family protein [Shewanella sp. ANA-3]
          Length = 325

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/327 (41%), Positives = 207/327 (63%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  S+VMHSGD +PLVK    + DA+  +S+K  G  AV
Sbjct: 179 GFTREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITDALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + DVM +N   I E+ L   A+Q++   NI
Sbjct: 239 IDEQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D     +G ++ LD+++ G+I
Sbjct: 299 NGLIVIDKEHHPVGALNMLDMVKAGVI 325


>gi|296104910|ref|YP_003615056.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295059369|gb|ADF64107.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 328

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 136/320 (42%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKDVLEIEREGLAQLDQYINQD----FSLACEKMFYCVGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLQVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   V D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVVCDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGVDVRTLGIADVMTPGGIRVRPGTLAVDVLNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  DLLR G++
Sbjct: 310 GDQ-LLGVVHMHDLLRAGVV 328


>gi|254473076|ref|ZP_05086474.1| arabinose 5-phosphate isomerase [Pseudovibrio sp. JE062]
 gi|211957797|gb|EEA92999.1| arabinose 5-phosphate isomerase [Pseudovibrio sp. JE062]
          Length = 337

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 161/319 (50%), Positives = 221/319 (69%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +Q A R+I  E   L +L++SL   L+  F  AVE I   KGRV+++GIGKSG IG+
Sbjct: 18  EEWIQSAARTIETEVAALDALQASLANGLAEPFTKAVETIAHSKGRVIVSGIGKSGIIGT 77

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVHA+EASHGDLGMIT DD++I LSWSG + EL ++L + RRF +P
Sbjct: 78  KLAATLASTGTPAFFVHASEASHGDLGMITEDDVVIALSWSGETQELASLLGFTRRFKVP 137

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +   +DI LTLP+ PE+CPHGLAPT+S ++QLA+GDALAIALLE++ F+
Sbjct: 138 LIALTRNASSALGSSSDICLTLPQVPEACPHGLAPTSSTLIQLALGDALAIALLEAKGFT 197

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGGKLG   +   D+MH+GD +P+ + G  + +A+ ++++K FG + + D  
Sbjct: 198 AQDFKVYHPGGKLGASLMHVKDIMHTGDHLPVAQSGMLMKEALVLMTQKGFGVLGITDAA 257

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            KL GIIT+GD+ R+   D    +VEDVM  NPK I E  L   A++++    IS L +V
Sbjct: 258 GKLIGIITDGDLRRHISPDFLEKAVEDVMTHNPKTIEETLLAPSALEMMNSLKISSLFIV 317

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  K +GI+  LDLL+ G
Sbjct: 318 -EDGKPVGIIRTLDLLKIG 335


>gi|239834502|ref|ZP_04682830.1| sugar isomerase, KpsF/GutQ family [Ochrobactrum intermedium LMG
           3301]
 gi|239822565|gb|EEQ94134.1| sugar isomerase, KpsF/GutQ family [Ochrobactrum intermedium LMG
           3301]
          Length = 361

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 173/312 (55%), Positives = 231/312 (74%), Gaps = 1/312 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E  GLS+LE +L   LS  F  AV+ I A +GR+V+TG+GKSGHIGSKLA+T A
Sbjct: 49  LRTIKTENAGLSALEDALNNGLSAPFVEAVKLIVASRGRLVVTGVGKSGHIGSKLAATFA 108

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT +FFVH+AEA+HGDLGMI RDD+I+ +SWSG + ELK I+ Y++RF IPLIAIT+ 
Sbjct: 109 STGTSAFFVHSAEANHGDLGMIGRDDVILAISWSGETAELKGIVNYSQRFRIPLIAITAG 168

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+ +DF   
Sbjct: 169 ENSALGRAADVVLLLPKTAEACPHGLAPTTSTMMQLAIGDALAIALLEARGFTPSDFKTF 228

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG LG   +   D+MH G+ +PLVK+G  + DA+ +L++K FGCV VVD+G  L GI+
Sbjct: 229 HPGGSLGASLIHIRDIMHRGERLPLVKMGTSMPDAMKVLAQKSFGCVVVVDDGGDLAGIV 288

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T+GDI RN  ++L  LSV+++M + PK + ++ L T A+  + +++I  L+VV +  + I
Sbjct: 289 TDGDISRNLSRNLAALSVDEIMTRKPKTVDQNMLATAALNTINENHIGALIVV-EAGRPI 347

Query: 328 GIVHFLDLLRFG 339
           G+VHF DLLR G
Sbjct: 348 GLVHFHDLLRIG 359


>gi|163844272|ref|YP_001621927.1| KpsF/GutQ family sugar isomerase [Brucella suis ATCC 23445]
 gi|163674995|gb|ABY39105.1| sugar isomerase, KpsF/GutQ family [Brucella suis ATCC 23445]
          Length = 333

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 169/319 (52%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  ALR+I  E  GL +LE +L   LS  F  AVE+I A +GR+V+TG+GKSGHIGS
Sbjct: 14  EAAITSALRTIKTENAGLVALEEALNNGLSGPFVEAVERIVASRGRLVVTGVGKSGHIGS 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+ EA+HGDLGMI  +D+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 74  KLAATFASTGTSAFFVHSGEANHGDLGMIGLEDVILAISWSGETVELKGIVNYSQRFRIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   + +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 134 LIAITSRQDTALGRAADVVLLLPKATEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLVK G P+ DA+ +L++K FGCV V D+ 
Sbjct: 194 PSDFKTFHPGGSLGASLIHIRDIMHRGNRLPLVKTGTPMPDAMKVLAQKSFGCVVVTDDA 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GDI RN  ++L+ L+V+D+M ++P+ I ++ L + A++ + +++I  L+VV
Sbjct: 254 GELAGIVTDGDISRNLSRNLSALAVDDIMTRSPRTIDQNMLASAALKTINENHIGALIVV 313

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 314 -EANRPIGLVHFHDLLRIG 331


>gi|308189075|ref|YP_003933206.1| isomerase [Pantoea vagans C9-1]
 gi|308059585|gb|ADO11757.1| putative isomerase [Pantoea vagans C9-1]
          Length = 327

 Score =  353 bits (906), Expect = 2e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F  A   I A +G+VV+ G+GKSGHIG K+A+
Sbjct: 13  QAGKTVLRIEREGLEQLDQYINDD----FARACALIYACQGKVVVMGMGKSGHIGKKMAA 68

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM++++D++I +S SG S+E+ A++   +R  I LI +
Sbjct: 69  TFASTGTPAFFVHPAEASHGDLGMVSKNDVVIAISNSGESNEILALIPVLKRQHIALICM 128

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +   AD+ L +    E+CP GLAPTTS    L +GDALA++LLE+R F+  DF
Sbjct: 129 TGRPDSAMGRVADVHLCVHVPQEACPLGLAPTTSTTATLVMGDALAVSLLEARGFTAEDF 188

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MHSGD +P V     L DA+  ++ K  G   +VD   K+
Sbjct: 189 ALSHPGGALGRKLLLHVADIMHSGDELPHVTRDASLRDALLEITRKNLGLTVIVDGLMKI 248

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D    ++ +VM      +  + L   A+ L++  NI+ ++V D
Sbjct: 249 EGIFTDGDLRRIFDMGIDFQRATIGEVMTPGGIRVRPNMLAVEALNLMQTKNITSILVAD 308

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D    +G+VH  D+LR G++
Sbjct: 309 DD-HLLGVVHMHDMLRAGVV 327


>gi|260460633|ref|ZP_05808884.1| KpsF/GutQ family protein [Mesorhizobium opportunistum WSM2075]
 gi|259033738|gb|EEW34998.1| KpsF/GutQ family protein [Mesorhizobium opportunistum WSM2075]
          Length = 333

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 172/333 (51%), Positives = 235/333 (70%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H KS+ +K   L + +++  ALR++  E+ G+++L  +L+  L+  F  AV+ I  I+GR
Sbjct: 2   HVKSLDKK--PLDRQASIASALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIG+K+A+TLASTGTP+FFVH  EA+HGDLGMI RDD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGAKIAATLASTGTPAFFVHPVEANHGDLGMIARDDAIIAISWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  I+ Y+RRFSIPLIAITS   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL IG
Sbjct: 120 MLGIVAYSRRFSIPLIAITSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG      S++M  GD IPL  +G  + +A+  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTLVSEIMRIGDQIPLASLGTKMPEAVMTL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S+K+ GCV +VD   +L GIIT+GD+ RN H++L  + V++VM + PK +   TL   A+
Sbjct: 240 SQKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAI 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            LL +HNI  L VV      +G+VHF DLLR G
Sbjct: 300 ALLNEHNIGAL-VVTKNNMPLGVVHFHDLLRIG 331


>gi|269797607|ref|YP_003311507.1| KpsF/GutQ family protein [Veillonella parvula DSM 2008]
 gi|282850054|ref|ZP_06259436.1| arabinose 5-phosphate isomerase [Veillonella parvula ATCC 17745]
 gi|294793355|ref|ZP_06758500.1| arabinose 5-phosphate isomerase [Veillonella sp. 6_1_27]
 gi|294795174|ref|ZP_06760308.1| arabinose 5-phosphate isomerase [Veillonella sp. 3_1_44]
 gi|269094236|gb|ACZ24227.1| KpsF/GutQ family protein [Veillonella parvula DSM 2008]
 gi|282580243|gb|EFB85644.1| arabinose 5-phosphate isomerase [Veillonella parvula ATCC 17745]
 gi|294453966|gb|EFG22341.1| arabinose 5-phosphate isomerase [Veillonella sp. 3_1_44]
 gi|294455786|gb|EFG24151.1| arabinose 5-phosphate isomerase [Veillonella sp. 6_1_27]
          Length = 323

 Score =  353 bits (906), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 140/326 (42%), Positives = 195/326 (59%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A + +  E R +  L S L       F  AV  I A KGRVV TG+GKSGHIG K
Sbjct: 2   TILEQAAQVLHEEARAIEELSSRL----DHNFVNAVNMILACKGRVVCTGMGKSGHIGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ F+H  E  HGDLGMIT DD+++  S SG + E+ +IL   RR    L
Sbjct: 58  IAATLASTGTPALFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIISILPSLRRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  + +S +A ++DIVL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+ 
Sbjct: 118 ICVVGKPESTLAKNSDIVLLAEVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F V HPGG LG    +   ++MH G+  P V  G  + DA+ +++EK  G   V+DE 
Sbjct: 178 ENFAVFHPGGSLGRKLLLTVENIMHGGEDNPTVFKGATVRDALFVMTEKGLGATNVIDEE 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
             L G++T+GD+ R      +     VED+M   P+ I +D L   A+ L+ ++    I+
Sbjct: 238 GHLLGLVTDGDVRRGLDSGSNFLEWPVEDMMTSMPRTITKDKLAAEALHLMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD     +GIVH  DLLR GI+
Sbjct: 298 VLPVVDTNNVCLGIVHITDLLRRGIV 323


>gi|332140250|ref|YP_004425988.1| arabinose 5-phosphate isomerase [Alteromonas macleodii str. 'Deep
           ecotype']
 gi|327550272|gb|AEA96990.1| arabinose 5-phosphate isomerase [Alteromonas macleodii str. 'Deep
           ecotype']
          Length = 326

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 127/323 (39%), Positives = 199/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A R I  E + +++L   L  +    F  A + + A +G+VV+ G+GKSGHIG+K
Sbjct: 8   NYIDSAKRVIEIETQAIANLSERLNDD----FITACDILFACQGKVVVCGMGKSGHIGNK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FF+H  EA+HGDLGM+ + D+++ +S SG ++EL  +L   +R  IP+
Sbjct: 64  IAATLASTGTPAFFMHPGEANHGDLGMLGKGDVLLAISNSGETNELVNLLPVVKRLGIPV 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T+   S +  HAD++L +  E E+C  GLAPTTS    L +GDALA+ALL+ + F+ 
Sbjct: 124 VAMTNSASSSLGQHADVILDISVEKEACSLGLAPTTSTTATLVMGDALAVALLDQKGFTS 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HPGG LG    +   D+M +G  IPL+++   + DA+  +S+K  G   V+D  
Sbjct: 184 DDFALSHPGGSLGRKLLLKVRDIMLTGSDIPLIELNASVADALLEISKKGLGMTGVLDTD 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+ T+GD+ R      D+++ +VE VM K  K    + L   A+ L+  H IS LM
Sbjct: 244 GTLTGVFTDGDLRRILDARIDVHSATVESVMTKGGKTTTAEQLAVEALNLMETHKISALM 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D+  K +G  +   LL+ G++
Sbjct: 304 VTDNEHKPVGAFNMHMLLKAGVL 326


>gi|114048833|ref|YP_739383.1| KpsF/GutQ family protein [Shewanella sp. MR-7]
 gi|113890275|gb|ABI44326.1| KpsF/GutQ family protein [Shewanella sp. MR-7]
          Length = 325

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 207/327 (63%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGCKVIDIEKSALDNLYQYVD---SVEFAQACELILNCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDVILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T + +S +A  + I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPESTMARLSKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  S+VMHSGD +PLVK    + +A+  +S+K  G  AV
Sbjct: 179 GFTREDFAMSHPGGALGRKLLLKVSNVMHSGDDLPLVKHDICITEALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + DVM +N   I E+ L   A+Q++   NI
Sbjct: 239 IDEQNKLVGIFTDGDLRRVIDAQVNLRTTPIADVMTRNCVTITENVLAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D     +G ++ LD+++ G+I
Sbjct: 299 NGLIVIDKEHHPVGALNMLDMVKAGVI 325


>gi|37678637|ref|NP_933246.1| putative polysialic acid capsule expression protein [Vibrio
           vulnificus YJ016]
 gi|37197377|dbj|BAC93217.1| putative polysialic acid capsule expression protein [Vibrio
           vulnificus YJ016]
          Length = 323

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 129/318 (40%), Positives = 189/318 (59%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQY----FDEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAMAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +D+MH+ + +P V     + DA+  +S+K  G  A+VD+   L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTDEQLPRVSPNALVRDALLEISQKGLGMTAIVDQDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+    
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLC-QD 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|260596173|ref|YP_003208744.1| D-arabinose 5-phosphate isomerase [Cronobacter turicensis z3032]
 gi|260215350|emb|CBA27344.1| Arabinose 5-phosphate isomerase [Cronobacter turicensis z3032]
          Length = 328

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 194/323 (60%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
              Q     +  E+ GL  L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K
Sbjct: 11  DFEQAGKDVLTIERAGLEHLDQYINAD----FARACESMFYCRGKVVVMGMGKSGHIGKK 66

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGDLGM++  D++I +S SG S+E+ A++   +R  + L
Sbjct: 67  IAATLASTGTPSFFVHPAEASHGDLGMVSAQDIVIAISNSGESNEILALIPVLKRLQVQL 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T   +S +A  ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+ 
Sbjct: 127 ICMTGRPESAMAKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTP 186

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+ 
Sbjct: 187 EDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDL 246

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            K+ G+ T+GD+ R F    DL+ + + DVM      +   TL   A+ L++  +I+ +M
Sbjct: 247 MKIDGVFTDGDLRRVFDMGGDLHQMKIVDVMTPGGIRVRPGTLAVDALNLMQSRHITSVM 306

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D  Q   G++H  DLLR G++
Sbjct: 307 VADGDQ-LRGVIHMHDLLRAGVV 328


>gi|28871583|ref|NP_794202.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213966607|ref|ZP_03394758.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato T1]
 gi|301383116|ref|ZP_07231534.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato Max13]
 gi|302058645|ref|ZP_07250186.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato K40]
 gi|302133822|ref|ZP_07259812.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato NCPPB
           1108]
 gi|28854835|gb|AAO57897.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213928457|gb|EEB62001.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. tomato T1]
 gi|331016692|gb|EGH96748.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. lachrymans
           str. M302278PT]
          Length = 324

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  KKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   K +G  +  DLLR G++
Sbjct: 300 LVVVDQNDKPVGAFNLQDLLRAGVM 324


>gi|192362290|ref|YP_001983259.1| sugar isomerase, KpsF/GutQ family subfamily [Cellvibrio japonicus
           Ueda107]
 gi|190688455|gb|ACE86133.1| sugar isomerase, KpsF/GutQ family subfamily [Cellvibrio japonicus
           Ueda107]
          Length = 323

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 144/327 (44%), Positives = 210/327 (64%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     VQ A R+I  E   +++LE  +       F  A + I A KGRV++TG+GKSGH
Sbjct: 1   MNSFDYVQSARRTIRLETEAIAALEERI----GEDFRRACDLILAGKGRVIVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVH  EASHGDLGMIT+DD+++ +S+SG+S+E+  +L   +R 
Sbjct: 57  IGKKIAATLASTGTPAFFVHPGEASHGDLGMITKDDIVLAISYSGTSNEIVTLLPLLKRT 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I +I++T   +S++A  A++ L +    E+CP  LAPT+S    L +GDALAIALLE+R
Sbjct: 117 GINIISMTGNPQSILAEVAEVHLNIYVATEACPLDLAPTSSTSATLVLGDALAIALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HPGG LG    +  SD+MH+GD IP V    PL++A+ ++S K FG   V
Sbjct: 177 GFTAEDFAFSHPGGALGRKLLLRLSDIMHTGDEIPRVSSDTPLLEALMVISAKGFGMTTV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D   +  GI T+GD+ R+  +  D+++  V D+M  NPK++ + TL   A++L+ +  I
Sbjct: 237 TDATGQFLGIYTDGDLRRSIDRGVDIHSAKVGDLMNPNPKILRDSTLAAEALKLMEESKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +VL+V +     IGIV   D+LR GII
Sbjct: 297 NVLLVSNAENHLIGIVKINDILRAGII 323


>gi|295097684|emb|CBK86774.1| KpsF/GutQ family protein [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 328

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKDVLEIEREGLAQLDQYINQD----FSLACEKMFYCAGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLHVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D
Sbjct: 250 QGIFTDGDLRRVFDMGVDVRTLGIADVMTPGGIRVRPGTLAVDVLNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  DLLR G++
Sbjct: 310 GDQ-LLGVVHMHDLLRAGVV 328


>gi|259907016|ref|YP_002647372.1| D-arabinose 5-phosphate isomerase [Erwinia pyrifoliae Ep1/96]
 gi|224962638|emb|CAX54093.1| Putative isomerase [Erwinia pyrifoliae Ep1/96]
 gi|283476811|emb|CAY72649.1| putative isomerase [Erwinia pyrifoliae DSM 12163]
          Length = 328

 Score =  353 bits (905), Expect = 3e-95,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F    + I   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLQIEREGLEQLDRYINDD----FTHTCDLIYRCRGKVVVMGMGKSGHIGKKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI I
Sbjct: 70  TFASTGTPAFFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 TSRPESAMGRAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MH G+++P V     L DA+  +++K  G   + D   ++
Sbjct: 190 ALSHPGGALGRKLLLRVDDIMHCGNAMPHVSRDASLRDALLEITQKNMGMTVICDASMQI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IG++H  D+LR G++
Sbjct: 310 ND-RLIGVIHMHDMLRAGVV 328


>gi|167552035|ref|ZP_02345788.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205323167|gb|EDZ11006.1| arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 328

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 130/319 (40%), Positives = 189/319 (59%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+T
Sbjct: 15  AGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAAT 70

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI IT
Sbjct: 71  FASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICIT 130

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 131 GRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDFA 190

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ 
Sbjct: 191 LSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKID 250

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R F    D+  L + +VM      +    L   A+ L++  +I+ ++V D 
Sbjct: 251 GIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADG 310

Query: 323 CQKAIGIVHFLDLLRFGII 341
            Q  +G++H  DLLR G++
Sbjct: 311 DQ-LLGVLHMHDLLRAGVV 328


>gi|220932726|ref|YP_002509634.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
 gi|219994036|gb|ACL70639.1| KpsF/GutQ family protein [Halothermothrix orenii H 168]
          Length = 331

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A + +  E   +  L+ S+  E    F   V  I   KGRV+ TGIGKSG IG KLA
Sbjct: 16  LQEARKVLEIEAYSVLKLKDSIGSE----FADIVRVILESKGRVIFTGIGKSGLIGQKLA 71

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T +STGTP+FFVHA EA HGDLGM+T DD+II +S SG ++E+ +++   RR    LIA
Sbjct: 72  ATFSSTGTPAFFVHAGEALHGDLGMVTGDDIIIAISNSGETEEVLSLVPSIRRIGAFLIA 131

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A +A+  L +  E E+CPHGLAPT S    LA+GDALAIAL + + F+  D
Sbjct: 132 VTGNRSSTLARYANNHLLVNIEEEACPHGLAPTASTTATLALGDALAIALSKLKGFTPED 191

Query: 204 FYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG   +    DV+      P+V+ G  + +A+  ++  + G  +VVDE  +
Sbjct: 192 FALFHPGGSLGRKLLTKVEDVLQVRKQNPVVQSGTSVKEALFTMTASKMGSTSVVDERGR 251

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GDI R   +  D     V +VM K+P  I +D L   A++++    ++ L VV
Sbjct: 252 LVGIITDGDIRRLLEESTDFLQKPVLEVMTKDPITIEKDRLAAEALKIMEDKEVNDLPVV 311

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
            +  K +G+++F DLLR  +
Sbjct: 312 -EDGKPVGMLNFQDLLRARV 330


>gi|66047369|ref|YP_237210.1| KpsF/GutQ [Pseudomonas syringae pv. syringae B728a]
 gi|63258076|gb|AAY39172.1| KpsF/GutQ [Pseudomonas syringae pv. syringae B728a]
 gi|330969692|gb|EGH69758.1| KpsF/GutQ [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 324

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQNDRPVGAFNLQDLLRAGVM 324


>gi|197287456|ref|YP_002153328.1| D-arabinose 5-phosphate isomerase [Proteus mirabilis HI4320]
 gi|194684943|emb|CAR47130.1| arabinose 5-phosphate isomerase [Proteus mirabilis HI4320]
          Length = 328

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 132/330 (40%), Positives = 192/330 (58%), Gaps = 8/330 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             +      Q   + +  E+ GL+ L   +  +    F  A EKI   +GRV++ G+GKS
Sbjct: 3   QKMTGFDFQQAGKKVLQIEQEGLAELAQYINDD----FSLACEKIFHCQGRVIVMGMGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A++   +
Sbjct: 59  GHIGHKIAATFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILALIPVLK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  I LI +T   +S +   ADI L +    E+CP GLAPTTS    L +GDALAIALL 
Sbjct: 119 RKQILLICMTRSPQSTMGKAADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLR 178

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF + HPGG LG    +  SD+M+  D IP V     L +A+  ++ K+ G  
Sbjct: 179 ARGFTAEDFALSHPGGALGRKLLLHVSDLMNKEDDIPRVNKEATLREALVEITRKKLGMT 238

Query: 255 AVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + D+   + GI T+GD+ R F    DLN   + DVM K    I  D+L   A+ L++  
Sbjct: 239 VICDDNMLINGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRISPDSLAVEALNLMQAK 298

Query: 313 NISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
           +I+ L+V + D    +G++H  DLL+ G++
Sbjct: 299 HITSLLVTEPDSDILLGVLHMHDLLQAGVV 328


>gi|261342642|ref|ZP_05970500.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315290|gb|EFC54228.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
          Length = 328

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKDVLEIEREGLAQLDQYINQD----FSLACEKMFYCAGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIALSNSGESNEILALIPVLKRLQVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 130 TSRPESSMARAADIHLCVKVPKEACPLGLAPTSSTTAALVMGDALAVALLEARGFTPEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+ TL + DVM      +   TL    + L++  +I+ +MV D
Sbjct: 250 QGIFTDGDLRRVFDMGVDVRTLGIADVMTSGGIRVRPGTLAVEVLNLMQSRHITSVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  DLLR G++
Sbjct: 310 GDQ-LLGVVHMHDLLRAGVV 328


>gi|227358282|ref|ZP_03842623.1| arabinose 5-phosphate isomerase [Proteus mirabilis ATCC 29906]
 gi|227161618|gb|EEI46655.1| arabinose 5-phosphate isomerase [Proteus mirabilis ATCC 29906]
          Length = 324

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 132/328 (40%), Positives = 192/328 (58%), Gaps = 8/328 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +      Q   + +  E+ GL+ L   +  +    F  A EKI   +GRV++ G+GKSGH
Sbjct: 1   MTGFDFQQAGKKVLQIEQEGLAELAQYINDD----FSLACEKIFHCQGRVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A++   +R 
Sbjct: 57  IGHKIAATFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILALIPVLKRK 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I LI +T   +S +   ADI L +    E+CP GLAPTTS    L +GDALAIALL +R
Sbjct: 117 QILLICMTRSPQSTMGKAADIHLCIKVPKEACPLGLAPTTSTTATLVMGDALAIALLRAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +  SD+M+  D IP V     L +A+  ++ K+ G   +
Sbjct: 177 GFTAEDFALSHPGGALGRKLLLHVSDLMNKEDDIPRVSKEATLREALVEITRKKLGMTVI 236

Query: 257 VDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D+   + GI T+GD+ R F    DLN   + DVM K    I  D+L   A+ L++  +I
Sbjct: 237 CDDNMLINGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRISPDSLAVEALNLMQAKHI 296

Query: 315 SVLMVVD-DCQKAIGIVHFLDLLRFGII 341
           + L+V + D    +G++H  DLL+ G++
Sbjct: 297 TSLLVTEPDSDILLGVLHMHDLLQAGVV 324


>gi|85713031|ref|ZP_01044068.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina baltica OS145]
 gi|85693134|gb|EAQ31095.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Idiomarina baltica OS145]
          Length = 325

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 129/318 (40%), Positives = 196/318 (61%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I  E+  +  L++ L       F+ A + +   KGR+++TG+GKSGHIG K+A+TL
Sbjct: 12  AREVIEIERDAIEGLKTFL----DDNFNRACQAMFDCKGRIIVTGMGKSGHIGGKIAATL 67

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTG+P+FFVH  EASHGDLGM+T  D++I +S SG + E+  I+   +R  + +IA+T 
Sbjct: 68  ASTGSPAFFVHPGEASHGDLGMVTDSDIVIAISNSGETGEILNIIPVMKRLGVTIIAMTG 127

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A  AD+ + +  E E+CP GLAPT S    L +GDALA+ALL +R F+ +DF +
Sbjct: 128 NPESTLATLADVHVCIRVEQEACPLGLAPTASTTASLVMGDALAVALLNARGFTADDFAL 187

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG  L +  SDVMH+GD +P V+    + DA+  +S K  G  ++VDE  +L G
Sbjct: 188 SHPGGSLGKRLLLRLSDVMHTGDRVPQVEQDALIRDALLEISRKGLGMTSIVDEHGRLAG 247

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R      D++T  + D M +      E+ L   A++L++   I+ L++VD  
Sbjct: 248 IFTDGDLRRILDSRVDVHTSKIADFMTRTCVTADENMLAAQALKLMQDRKINGLIIVDHD 307

Query: 324 QKAIGIVHFLDLLRFGII 341
            K  G ++  DLL+ G++
Sbjct: 308 GKPHGAMNMHDLLQAGVV 325


>gi|307824377|ref|ZP_07654603.1| KpsF/GutQ family protein [Methylobacter tundripaludum SV96]
 gi|307734757|gb|EFO05608.1| KpsF/GutQ family protein [Methylobacter tundripaludum SV96]
          Length = 325

 Score =  352 bits (904), Expect = 4e-95,   Method: Composition-based stats.
 Identities = 135/329 (41%), Positives = 203/329 (61%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             L      +  L  I  E + +++L   +  +    F  A + +    GRVV+TG+GKS
Sbjct: 1   MKLHDEKLRKLGLAVIQVETQAIAALADRINDD----FVFACKLMFNCNGRVVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+FFVH+ EASHGDLGMITR D+++ LS SG ++E+  IL   +
Sbjct: 57  GHIAGKIAATLASTGTPAFFVHSGEASHGDLGMITRQDVVLALSNSGETEEVLTILPIIK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  +PLIA+T    S +A  A   + +  E E+CP GLAPT+S    L +GDALA++LLE
Sbjct: 117 RLGVPLIAMTGNPASTLAKFATTHINVAVEQEACPLGLAPTSSTTAALVMGDALAVSLLE 176

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF + HPGG LG  L +   D+MH+ + +P+V     +  A+  ++EK+ G  
Sbjct: 177 ARGFTRDDFALSHPGGSLGKRLLLMVGDIMHADEKVPIVSESALISHALLEMTEKKLGMT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+VD   ++ GI T+GD+ R   +  D++  ++ +VM  N  VI  D L   AMQ++ + 
Sbjct: 237 AIVDADNRVAGIFTDGDLRRMLSRNLDIHKTAITEVMTPNCAVISADILAAEAMQIMERK 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD  Q+AIG ++  DL+R GI+
Sbjct: 297 KINALIVVDGQQRAIGALNMHDLIRAGIV 325


>gi|330446809|ref|ZP_08310460.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
 gi|328491000|dbj|GAA04957.1| arabinose 5-phosphate isomerase D-arabinose 5-phosphate isomerase
           [Photobacterium leiognathi subsp. mandapamensis
           svers.1.1.]
          Length = 323

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 124/318 (38%), Positives = 198/318 (62%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E + L ++   +       F+ A + +   +G+V++ G+GKSGHIG KLA+TL
Sbjct: 11  GKQVLDIEIQALQNISHYI----DDSFNTACQLVLDCQGKVIVMGMGKSGHIGRKLAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGMI  +D++I +S SG + E+ A+L   +R  IP+I++T 
Sbjct: 67  ASTGTPAFFVHPGEASHGDLGMIKPEDVVIAISNSGEASEILALLPVIKRLGIPMISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  A + L +  E E+CP  LAPT+S    L +GDALAI+++E+R F+ +DF +
Sbjct: 127 KPNSSMAKMAIVNLQITVEKEACPLNLAPTSSTTATLVMGDALAISVMEARGFTADDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +DVMHSG+ +P+++    + DA+  +S K  G  AVV+  Q+L G
Sbjct: 187 SHPGGALGRKLLMRIADVMHSGEMLPIIEETASIKDALLEISRKGLGMTAVVNHQQELSG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D++  S+ DVM +NP+ I    L    ++++    I+ L+V  + 
Sbjct: 247 IFTDGDLRRLLDKHIDIHATSIGDVMSRNPQTISPQLLAAEGLKIMEDRKINGLLVT-EN 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G ++  DLL+ G++
Sbjct: 306 NQLVGALNMHDLLKAGVM 323


>gi|302392914|ref|YP_003828734.1| KpsF/GutQ family protein [Acetohalobium arabaticum DSM 5501]
 gi|302204991|gb|ADL13669.1| KpsF/GutQ family protein [Acetohalobium arabaticum DSM 5501]
          Length = 325

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 138/328 (42%), Positives = 189/328 (57%), Gaps = 7/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             L  +     A R +  EK  + +L  S+ G     F   VE I    GRVV+TG+GKS
Sbjct: 1   MELDADQIKSQAKRVLDIEKEAIENLSDSINGT----FVELVEVILNCSGRVVMTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G I  KLA+T +STGTPSFF+H  EA HGDLGM+T  D++I LS SG + E+  IL   +
Sbjct: 57  GLIAKKLAATFSSTGTPSFFLHPGEAVHGDLGMVTAKDIVIALSNSGETTEVIQILPVIK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    +IA+T    S +A +AD  L    E E+CP  LAPT S    LA+GDALAIALLE
Sbjct: 117 RIGARIIALTGNIDSTLAENADYFLDTSVEQEACPLDLAPTASTTATLALGDALAIALLE 176

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           SR F   DF + HPGG LG  L +   DVMH  +  P+V    PL   +  ++  + G  
Sbjct: 177 SRGFEPEDFALYHPGGSLGKRLLLKVEDVMHVRERNPIVTQDQPLKKTLFTMTSTQMGAA 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            +V+E  KL G+IT+GD+ R   +  DL  L  + VM  +P  I  D L   A+++++  
Sbjct: 237 NIVNEAGKLVGVITDGDVRRKLEESPDLLQLPAKQVMTADPVTITADKLAVEAVKIMQDK 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            I+ L V++D Q+ IG+V+F DLL+ G+
Sbjct: 297 EINDLPVINDEQEPIGMVNFQDLLKAGV 324


>gi|303230178|ref|ZP_07316946.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|303231001|ref|ZP_07317744.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514383|gb|EFL56382.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302515104|gb|EFL57078.1| putative arabinose 5-phosphate isomerase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 323

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 198/326 (60%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A + +  E + +  L ++L       F  AV  I A KGRVV TG+GKSGHIG K
Sbjct: 2   DILEQAAQVLHEEAQAIEQLITTLDQ----SFVNAVNMILACKGRVVCTGMGKSGHIGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ F+H  E  HGDLGMIT DD+++  S SG + E+  IL   RR    L
Sbjct: 58  IAATLASTGTPALFMHPGEGVHGDLGMITEDDVVLAFSNSGETGEIIGILPSLRRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  + +S +A ++D+VL    E E+CP GLAPTTS  + LA+GDALA+ LLE  +F+ 
Sbjct: 118 ICVVGKPESTLAKNSDVVLLAQVEREACPLGLAPTTSTTVALALGDALAVCLLERHHFTP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F V HPGG LG    +   ++MH G+  P+V  G  + DA+ +++EK  G  +V+DE 
Sbjct: 178 ENFAVFHPGGSLGRRLLLTVENIMHGGEDNPVVHKGATVRDALFVMTEKGLGATSVIDED 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
             L G++T+GD+ R      +     VED+M   P+ I +D L   A+ ++ ++    I+
Sbjct: 238 GHLIGLVTDGDVRRGLDSGSNFLEWPVEDMMTNMPRTITKDKLAAEALHVMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD+   A+GIVH  DLLR GI+
Sbjct: 298 VLPVVDEEGHAMGIVHITDLLRRGIV 323


>gi|77166240|ref|YP_344765.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrosococcus oceani ATCC 19707]
 gi|76884554|gb|ABA59235.1| sugar phosphate isomerase involved in capsule formation, KpsF/GutQ
           [Nitrosococcus oceani ATCC 19707]
          Length = 330

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 197/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +Q     I  E   +++L + + G     F  A + + A +GR+VI G+GKSGHI
Sbjct: 9   MDKRLIQLGAAVIDTEAHAIAALRTRING----NFAAACKYMLACEGRIVILGMGKSGHI 64

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG ++E+  IL   +R  
Sbjct: 65  GGKIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLG 124

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIA+T + +S +   ADI + +  E E+CP GLAPT S+   LA+GDALAIALLESR 
Sbjct: 125 VPLIALTGQPRSTLGKVADIHIDISVEKEACPLGLAPTASSTATLAMGDALAIALLESRG 184

Query: 199 FSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HP G     L +  SD+MH G+ IP +     L  A+  ++ K  G  AVV
Sbjct: 185 FTAEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAIPENVLLSSALLEMTRKGLGMTAVV 244

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +      GI T+GD+ R   +  D++   +  +M  N K +  D L   A+Q++++H I+
Sbjct: 245 NAQNHAVGIFTDGDLRRALDQGIDVHITPIAKIMTANCKTLGPDLLAAEALQIMQRHRIN 304

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD  Q+ IG ++  DLLR G++
Sbjct: 305 ALLVVDTEQRLIGALNMHDLLRAGVL 330


>gi|146343054|ref|YP_001208102.1| arabinose 5-phosphate isomerase [Bradyrhizobium sp. ORS278]
 gi|146195860|emb|CAL79887.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. ORS278]
          Length = 333

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 158/320 (49%), Positives = 222/320 (69%), Gaps = 1/320 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ VQ ALR++ A   G++++ ++L+G L   F  AV  I+  KGR ++TG+GKSGH+  
Sbjct: 14  NADVQSALRTLDAGSNGIAAIAAALRGPLGAAFAAAVGLIRQAKGRAILTGLGKSGHVAR 73

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH+AEA HGDLGMIT DD+++ LSWSG   E+K ++ Y +RF+IP
Sbjct: 74  KMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVVALSWSGEQPEMKTLVNYTKRFAIP 133

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS  +S +   A IVL LPK  E+CPH LAPTTS +MQ AIGDALAIALLE R F+
Sbjct: 134 MIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGDALAIALLEGRGFT 193

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG +    SD+M SGD++PL  +G  + DA+  +S K  GCV +VD  
Sbjct: 194 ALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMSAKGLGCVVIVDGR 253

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             + GIIT+GD+ R    DL ++SV+++M  NP+ +  + L + A+++L    I+ L+V 
Sbjct: 254 GHVAGIITDGDLRRKMRADLLSVSVDEIMTANPRTVRREALASEALEILNSAKITTLIVT 313

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   + +GI+H  DLLR G+
Sbjct: 314 DGA-RPVGILHMHDLLRAGV 332


>gi|16264321|ref|NP_437113.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
 gi|15140458|emb|CAC48973.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
          Length = 337

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 152/338 (44%), Positives = 219/338 (64%), Gaps = 4/338 (1%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKA 62
            +     T   H+    + ++   R++     G+ +L   L      +     AVE +  
Sbjct: 1   MNALTHPTADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGD 58

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GRVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG
Sbjct: 59  GDGRVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSG 118

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  +L YA+RF +P+I+I+S  +S +A +++I L LPK PE+CPHGLAPTTSA++Q
Sbjct: 119 ETAELANMLTYAKRFKVPIISISSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQ 178

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A
Sbjct: 179 LAVGDALAIALLERRGFSAEDFKAFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEA 238

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +  +S K FG V + DE  KL G+IT+GD+ R+   DL    V++VM +NP+V+  + L 
Sbjct: 239 VIEMSAKGFGVVGITDESGKLIGVITDGDLRRHMAGDLLAQPVQEVMSRNPRVVRSEVLA 298

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + AM+ L +H ++VL +VD+    +GI+H  DLLR G+
Sbjct: 299 SAAMEFLEEHQVTVLFLVDEAGAPVGILHIHDLLRAGV 336


>gi|322834664|ref|YP_004214691.1| KpsF/GutQ family protein [Rahnella sp. Y9602]
 gi|321169865|gb|ADW75564.1| KpsF/GutQ family protein [Rahnella sp. Y9602]
          Length = 328

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 131/316 (41%), Positives = 195/316 (61%), Gaps = 8/316 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
             +  E+ GL  L+  + G+    F  A EKI A  G+VV+ G+GKSGHIG K+A+T AS
Sbjct: 18  DVLKTEREGLEQLDQYINGD----FTRACEKIFACNGKVVVMGMGKSGHIGRKMAATFAS 73

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EASHGDLGM+++ D++I++S SG + E+  ++   +R  I LI +TS  
Sbjct: 74  TGTPAFFVHPGEASHGDLGMVSKQDVVILISNSGEAHEILGLIPVLKRLGITLICMTSNP 133

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +   AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF + H
Sbjct: 134 ESTMGKAADVHLCVKVPKEACPLGLAPTSSTTAVLVMGDALAVALLEARGFTPEDFALSH 193

Query: 209 PGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + ++  K++GI 
Sbjct: 194 PGGALGRKLLLRVSDIMHTGDEIPHVSREASLRDALLEITRKNLGMTVICNDLMKIEGIF 253

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R F    ++NT S+ DVM      +    L   A+ L++  +I+ +MV D  Q 
Sbjct: 254 TDGDLRRIFDMGVNINTASIADVMTTGGIRVRPSLLAVDALNLMQDKHITCVMVADGDQ- 312

Query: 326 AIGIVHFLDLLRFGII 341
            +G++H  D+LR G++
Sbjct: 313 LLGVLHMHDMLRAGVV 328


>gi|330877181|gb|EGH11330.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. morsprunorum
           str. M302280PT]
          Length = 324

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 141/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  KKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALLE+R F
Sbjct: 120 RMISLTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   K +G  +  DLLR G++
Sbjct: 300 LVVVDQNDKPVGAFNLQDLLRAGVM 324


>gi|307320141|ref|ZP_07599561.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
 gi|306894187|gb|EFN24953.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
          Length = 336

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 152/335 (45%), Positives = 218/335 (65%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            +  T   H+    + ++   R++     G+ +L   L      +     AVE +    G
Sbjct: 3   VRHATADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDG 60

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + 
Sbjct: 61  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETA 120

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I S  +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 121 ELANMLTYAKRFKVPIVSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 180

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  
Sbjct: 181 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIE 240

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V + DE  KL G+IT+GD+ R+   DL    V++VM +NP+VI  D L + A
Sbjct: 241 MSAKGFGVVGITDESGKLIGVITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAA 300

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ ++ H ++VL +VD+    +GI+H  DLLR G+
Sbjct: 301 MEFMQDHKVTVLFLVDEAGAPVGILHIHDLLRAGV 335


>gi|310766228|gb|ADP11178.1| D-arabinose 5-phosphate isomerase [Erwinia sp. Ejp617]
          Length = 328

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F    + I   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLQIEREGLEQLDRYINDD----FTHTCDLIYRCRGKVVVMGMGKSGHIGKKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI I
Sbjct: 70  TFASTGTPAFFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 TSRPESAMGRAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MH G+++P V     L DA+  +++K  G   + D   ++
Sbjct: 190 ALSHPGGALGRKLLLRVDDIMHCGNAMPHVSRDASLRDALLEITQKNMGMTVICDASMQI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV D
Sbjct: 250 EGIFTDGDLRRVFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G++H  D+LR G++
Sbjct: 310 ND-RLLGVIHMHDMLRAGVV 328


>gi|288942540|ref|YP_003444780.1| KpsF/GutQ family protein [Allochromatium vinosum DSM 180]
 gi|288897912|gb|ADC63748.1| KpsF/GutQ family protein [Allochromatium vinosum DSM 180]
          Length = 339

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 134/318 (42%), Positives = 188/318 (59%), Gaps = 7/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
               I  E   +++L   L       F  A   + A  GR+V+ G+GKSGHIG K+A+TL
Sbjct: 26  GRAVIETEASAVAALAERL----DDAFVAACGHMLACDGRIVVLGMGKSGHIGGKIAATL 81

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTG+P+FFVH  EASHGDLGMIT  D+++ +S SG + EL  IL   +R  +PLIA+T 
Sbjct: 82  ASTGSPAFFVHPGEASHGDLGMITPRDVVLAISNSGETAELLTILPLIKRLGVPLIAMTG 141

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S +A  AD+ L +    E+CP GLAPT+S    LA+GDALAIALLESR F+  DF  
Sbjct: 142 RRESTLAHEADVHLDISVATEACPLGLAPTSSTTAALAMGDALAIALLESRGFTAEDFAR 201

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HP G LG    +   DVMH G+ +P V +G  L+D +  +S K  G  AVV+    L G
Sbjct: 202 SHPAGTLGRRLLLHVDDVMHQGERLPWVALGTSLLDTLEEISRKGLGMSAVVNPDGTLAG 261

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           + T+GD+ R   +  D++  S++ VM +    I    L   A++L+    I+ L+VVD  
Sbjct: 262 VFTDGDLRRALDQGIDVHHTSIDTVMTRQCATIQSGALAVEAVRLMESRAINGLLVVDTG 321

Query: 324 QKAIGIVHFLDLLRFGII 341
            + IG ++  DLLR G++
Sbjct: 322 GRLIGALNMHDLLRAGVV 339


>gi|157148768|ref|YP_001456087.1| D-arabinose 5-phosphate isomerase [Citrobacter koseri ATCC BAA-895]
 gi|157085973|gb|ABV15651.1| hypothetical protein CKO_04600 [Citrobacter koseri ATCC BAA-895]
          Length = 328

 Score =  352 bits (903), Expect = 5e-95,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E+ GL+ L+  +       F  A EKI +  G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGKDVLEIEREGLAELDQYIDQ----NFTLACEKIFSCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT +FFVH  EA+HGDLGM+T  D++I +S SG S+E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSAFFVHPGEAAHGDLGMVTSQDVVIAISNSGESNEIAALIPVLKRLQVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVNKNASLRDALLEITRKNLGMTVICDDTMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+  L + DVM      +    L   A+ L++  +I+ ++V D
Sbjct: 250 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRPGILAVNALNLMQSRHITSVLVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G++H  DLLR G++
Sbjct: 310 GDQ-LLGVLHMHDLLRAGVV 328


>gi|269137860|ref|YP_003294560.1| D-arabinose 5-phosphate isomerase [Edwardsiella tarda EIB202]
 gi|267983520|gb|ACY83349.1| D-arabinose 5-phosphate isomerase [Edwardsiella tarda EIB202]
 gi|304557913|gb|ADM40577.1| Arabinose 5-phosphate isomerase [Edwardsiella tarda FL6-60]
          Length = 328

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 189/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A E +    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKDVLRIEREGLAQLDHFINQD----FSRACEAMLRCSGKVVVMGMGKSGHIGRKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT +FFVH  EASHGDLGM+   D+++ +S SG S E++A++   +R S+ LI +
Sbjct: 70  TLASTGTSAFFVHPGEASHGDLGMVEPRDVVLAISNSGESQEIQALIPVLKRQSVTLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPDSAMGRAADIHLCIRVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD +P V     L DA+  ++ K  G   +      +
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHSGDEVPTVSPTASLRDALLEITRKNLGLTVICGPDAHI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    DLN   + DVM +    I    L   A+ L++  +I+ L+V +
Sbjct: 250 DGIFTDGDLRRIFDMGIDLNNAKIADVMTRGGIRIRPTALAVDALNLMQDRHITSLLVAE 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IG+VH  D+LR G++
Sbjct: 310 ND-RLIGVVHMHDMLRAGVV 328


>gi|238796188|ref|ZP_04639698.1| Arabinose 5-phosphate isomerase [Yersinia mollaretii ATCC 43969]
 gi|238719881|gb|EEQ11687.1| Arabinose 5-phosphate isomerase [Yersinia mollaretii ATCC 43969]
          Length = 319

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + +  E+ GL+ L+  +  +    F  A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 5   QAGKQVLHIEREGLAQLDQYINDD----FSSACEAIFNCHGKVVVMGMGKSGHIGCKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+F VH AEASHGDLGM+T  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 61  TFASTGTPAFSVHPAEASHGDLGMVTPQDIVLAISNSGESNEILALIPVLKRQKIKLICM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 121 SNNPESTMGKAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 180

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G  IP V     L DA+  ++ K  G   + D+   +
Sbjct: 181 ALSHPGGALGRKLLLRISDIMHTGAEIPHVSPDASLRDALLEITRKNLGLTVICDDLMMI 240

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI T+GD+ R F    DLN   + DVM      +    L   A+ L+   +I+ ++V D
Sbjct: 241 KGIFTDGDLRRVFDMGIDLNHAKIADVMTSGGIRVRPTMLAVDALNLMESRHITAVLVAD 300

Query: 322 DCQKAIGIVHFLDLLRFGII 341
             Q  +G+VH  D+LR G++
Sbjct: 301 GEQ-LLGVVHMHDMLRAGVV 319


>gi|330895267|gb|EGH27605.1| KpsF/GutQ [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 324

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 203/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T +++S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDSESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQNDRPVGAFNLQDLLRAGVM 324


>gi|295675420|ref|YP_003603944.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1002]
 gi|295435263|gb|ADG14433.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1002]
          Length = 327

 Score =  352 bits (903), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 190/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV+ I   +GRVV++GIGKSGHI  
Sbjct: 8   DRALTLARDVLDIEADAVRALRDQLDG----SFVGAVDFILGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELMAILPLIKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPGSSLAQLADVHLNSGVAKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V     + DA+  L+ KR G  +VVD 
Sbjct: 184 RDDFARSHPGGALGRRLLTYVRDVMRTGDQLPQVTPEATVSDALFQLTAKRMGMTSVVDH 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L +  VM   P+ I  D L   A++L+ ++ I+ +
Sbjct: 244 EGRVTGIFTDGDLRRVLERDGDFRQLPIGSVMTAGPRTIGPDQLAVEAVELMERYRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDESGKLIGALNMHDLFSKKVI 327


>gi|188532477|ref|YP_001906274.1| D-arabinose 5-phosphate isomerase [Erwinia tasmaniensis Et1/99]
 gi|188027519|emb|CAO95366.1| Putative isomerase [Erwinia tasmaniensis Et1/99]
          Length = 328

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 126/320 (39%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F      I   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLRIEREGLEQLDRYINDD----FTQTCNLIYRCRGKVVVMGMGKSGHIGKKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+  DD++I +S SG S E+ A++   +R  + LI +
Sbjct: 70  TFASTGTPAFFVHPAEASHGDLGMVAPDDVVIAISNSGESSEILALIPVLKRRHVTLICL 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +S   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 130 SSRPDSSMGRAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MH G+ +P V     L DA+  +++K  G   + D+  ++
Sbjct: 190 ALSHPGGALGRKLLLRVDDIMHCGNDMPHVGRDASLRDALLEITQKNMGMTVICDDSMRI 249

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F   +N    S+E VM      +   TL   A+ L++  NI+ +MV +
Sbjct: 250 EGIFTDGDLRRVFDMGINIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVAE 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G++H  D+LR G++
Sbjct: 310 ND-RLLGVIHMHDMLRAGVV 328


>gi|121602747|ref|YP_988655.1| KpsF/GutQ family sugar isomerase [Bartonella bacilliformis KC583]
 gi|120614924|gb|ABM45525.1| sugar isomerase, KpsF/GutQ family [Bartonella bacilliformis KC583]
          Length = 330

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 178/329 (54%), Positives = 236/329 (71%), Gaps = 1/329 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T+    L     V  AL++I +EK+GL+ LE +L   LS  F  AV+ I+  KGRVVIT
Sbjct: 1   MTQSVDMLALQCAVTSALKTISSEKQGLAVLEKALLKNLSHSFREAVQTIRDAKGRVVIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI+  D+I+ +SWSG + EL  I
Sbjct: 61  GLGKSGHIGAKIAATLASTGTPAFFVHAAEANHGDLGMISFSDVILAVSWSGETTELSGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + YA+RF  PLIAITS   S +   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA
Sbjct: 121 INYAKRFRTPLIAITSGENSTLGRQADIVLLLPKVEEACPHGLAPTTSTIMQLAMGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE R F+  DF + HPGG LG       D+MH GD+IPLV  G  + +A+++L EKR
Sbjct: 181 VALLEMRGFTAIDFKIYHPGGSLGARLKYVRDIMHQGDNIPLVIQGTLMTEAMSVLVEKR 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV VV++  +L GI+T+GD+ RN H+DL+  +V+++M K+PK++  D L+  A+  + 
Sbjct: 241 FGCVGVVNQQGELIGIVTDGDLARNIHRDLSQFNVDEMMTKDPKILSPDALVGTAIAFIH 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            H+I    VV + +K +GIVHF DLLR G
Sbjct: 301 DHHIGAFFVV-ENKKPVGIVHFHDLLRVG 328


>gi|17545132|ref|NP_518534.1| hypothetical protein RSc0413 [Ralstonia solanacearum GMI1000]
 gi|17427423|emb|CAD13941.1| putative sugar isomerase (sis) protein [Ralstonia solanacearum
           GMI1000]
          Length = 333

 Score =  351 bits (902), Expect = 6e-95,   Method: Composition-based stats.
 Identities = 138/328 (42%), Positives = 195/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+S    ++S  F  AVE +    GRVV++GIGKSG
Sbjct: 10  NFNPDRALALAQQTFDIEAQAVLGLKS----QVSADFARAVEMVLRCTGRVVVSGIGKSG 65

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL AIL   +R
Sbjct: 66  HIARKVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLVKR 125

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +A HAD++L    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 126 LGARLIAVTGNPQSSLAQHADVILNSRVEVEACPLNLAPTASTTAQMALGDALAVALLDA 185

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F  +DF   HPGG LG        D+M  GD++P V    PL  A+  ++ K     A
Sbjct: 186 RGFGADDFARSHPGGSLGRKLLTHVRDIMRQGDAVPRVTEDTPLSQALMEITRKGMAMTA 245

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +  G+ T+GD+ R     +D  T+ + +VM +NP  +  D L   A++++  H 
Sbjct: 246 VVDATGRAVGVFTDGDLRRLLETPRDWRTVPMHEVMHRNPHAVGPDQLAVEAVEVMETHR 305

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD   + +G +H  DL R  +I
Sbjct: 306 INQLLVVDAAGQLMGALHIHDLTRAKVI 333


>gi|291279430|ref|YP_003496265.1| arabinose-5-phosphate isomerase [Deferribacter desulfuricans SSM1]
 gi|290754132|dbj|BAI80509.1| arabinose-5-phosphate isomerase [Deferribacter desulfuricans SSM1]
          Length = 320

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 145/323 (44%), Positives = 202/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A +++  E   + SL   L  +    F  AV+ I   KGR+V+TG+GKSG IG K
Sbjct: 2   DVIDIAKKALKIEADAIYSLIEKLNDD----FVKAVDIIYNCKGRLVVTGMGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +AST ASTGTPS F+H AE  HGDLGMI + D+++ +S SG +DEL +IL   +R  +PL
Sbjct: 58  IASTFASTGTPSLFLHPAEGVHGDLGMIVKGDVVLAISNSGETDELVSILPIIKRLGVPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+I     S +A  +D VL    E E+CP  LAPT S    LA+GDALA+ALLE R F E
Sbjct: 118 ISIVGRLNSTLAKRSDCVLDASVEKEACPLNLAPTASTTAALALGDALAVALLEKRGFKE 177

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG  L +  SD+ H GD +P+VK    + +AI  +S K FGC  +VD+ 
Sbjct: 178 EDFALFHPSGSLGKRLLLKVSDIFHMGDKVPVVKSDVTVTEAILEMSSKGFGCTTIVDDN 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G++T+GD+ R     KDL   +V D+  KNPK I ED+L   A+Q++ +++I+ L+
Sbjct: 238 GALIGVLTDGDLRRGLEKYKDLFERNVMDIASKNPKTIDEDSLAAKALQIMEKYSITSLI 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V+DD ++  GIVH  DLL+ GI+
Sbjct: 298 VIDDKKRPYGIVHLHDLLKSGIV 320


>gi|319899252|ref|YP_004159345.1| sugar isomerase [Bartonella clarridgeiae 73]
 gi|319403216|emb|CBI76775.1| sugar isomerase [Bartonella clarridgeiae 73]
          Length = 331

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 175/330 (53%), Positives = 226/330 (68%), Gaps = 1/330 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
             +  H+L   + V  AL++I  EKRGL  LE +   +L+  F  AV+ I    G VVIT
Sbjct: 2   TIQPTHTLTLQNAVILALKTISVEKRGLEVLEKAFHEKLADSFRAAVQTISNANGHVVIT 61

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+I+ LSWSG + EL  I
Sbjct: 62  GLGKSGHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSDDVILALSWSGETTELSGI 121

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + +A RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPTTS  MQL +GD+LA
Sbjct: 122 ISHAARFRIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTTSTTMQLVLGDSLA 181

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IALLE R F+  DF + HPGG LG       D+MH GD +PLV  G  + +A+ IL +K 
Sbjct: 182 IALLEMRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVAQGISMTEAMEILVKKH 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V++   +L GI+T+GD+ RN HKDL+   V++VM KNPK +  DTL+  A   + 
Sbjct: 242 FGCVGVINPRGELIGIVTDGDLARNIHKDLSQFDVDEVMTKNPKTVSPDTLVGAATAFIN 301

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            H+I    V+ + +K IGIVHF DLLR G+
Sbjct: 302 DHHIGAFFVI-ENKKPIGIVHFHDLLRIGV 330


>gi|284008690|emb|CBA75349.1| arabinose 5-phosphate isomerase [Arsenophonus nasoniae]
          Length = 322

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 134/320 (41%), Positives = 197/320 (61%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A + +  E+ GL++LE  +  +    F+ A E I    G+VV+ G+GKSGHIG K+A+
Sbjct: 8   KTAKKVLEIERSGLANLEQYINDD----FNQACELIFKCTGKVVVMGMGKSGHIGRKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLGMI+  D+++ +S SG S+E+ A++   +R  I LI +
Sbjct: 64  TLASTGTPAFFVHPGEASHGDLGMISSKDIVLAISNSGESNEILALIPVLKRQHIALICM 123

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +   ADI L +    E+CP GLAPTTS    L +GDA+A+ALLE+R F+  DF
Sbjct: 124 TKNPDSSMGKAADIHLCIKVPQEACPLGLAPTTSTTAMLVMGDAIAVALLEARGFTAEDF 183

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G +IP V     L  A+  ++ K+ G V + +E  ++
Sbjct: 184 ALSHPGGTLGRKLLLRVSDLMHTGKNIPNVPKQATLQQALVEITRKKLGMVVICNEEMQI 243

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R    + DLN   + DVM      +  D L   A+ L++QH+I+ L++  
Sbjct: 244 EGIFTDGDLRRVFAMNIDLNNAKIADVMTTGGIRVKPDMLAIDALNLMQQHHITSLLIA- 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                IG++H  DLL+ GII
Sbjct: 303 KADTLIGVIHLHDLLQAGII 322


>gi|27364144|ref|NP_759672.1| Arabinose 5-phosphate isomerase [Vibrio vulnificus CMCP6]
 gi|27360262|gb|AAO09199.1| Arabinose 5-phosphate isomerase [Vibrio vulnificus CMCP6]
          Length = 323

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 189/318 (59%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E RGL  L          QF  A E I    G+VV+ G+GKSGHIG K+A++L
Sbjct: 11  AKQVLATEIRGLEQLSQY----FDEQFEQACELILNNAGKVVVMGMGKSGHIGKKIAASL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT SFFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R  I +I++T 
Sbjct: 67  ASTGTSSFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLGIRIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  AD  L +    E+CP GLAPTTS    L +GDA+A+ALL++R F+  DF +
Sbjct: 127 KPSSTMAKLADYHLQITVPEEACPLGLAPTTSTTATLVMGDAIAVALLQARGFTAEDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +D+MH+G+ +P V     + DA+  +S+K  G  A+VD    L G
Sbjct: 187 SHPGGALGRKLLLKLNDIMHTGEQLPRVSPNALVRDALLEISQKGLGMTAIVDHDNLLLG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + +VM K+P V     L    + L++Q  I+ LM+    
Sbjct: 247 IFTDGDLRRILDKRVDIHSAQIGEVMTKHPTVANPSMLAVEGLNLMQQKKINGLMLC-QD 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|330964016|gb|EGH64276.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 324

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  KKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRVGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 RMISLTGDPESILARAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+++
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAILE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+   ++++VM  + K    D L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTTIDEVMTLHGKTAHADMLAAQALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   K +G  +  DLLR G++
Sbjct: 300 LVVVDQNDKPVGAFNLQDLLRAGVM 324


>gi|58531784|gb|AAW78655.1| KpsF3 [Sinorhizobium fredii]
          Length = 337

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 154/335 (45%), Positives = 222/335 (66%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            + V  +GHS   ++ +    R++     G+ +L   L      +     AVE +    G
Sbjct: 4   LRHVKGEGHS--PSAILDSIGRTLATATNGIKALAEHLATDESFARSLVEAVELVGDGHG 61

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGM+T DD++I+LSWSG + 
Sbjct: 62  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMVTSDDVLILLSWSGETA 121

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I+S   S++A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 122 ELANMLTYAKRFKVPIVSISSNRDSILARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 181

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H  + +PL+ +G P+ +A+  
Sbjct: 182 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVHELAHVAEQMPLLAVGRPMSEAVIE 241

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V ++D    L G+IT+GD+ R+   DL    VE+VM  +PKVI  D L + A
Sbjct: 242 MSSKGFGVVGIIDGSGVLVGVITDGDLRRHMAGDLLGQPVEEVMSCHPKVIHADVLASAA 301

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ +++H ++VL +VD+     GI+H  DLLR G+
Sbjct: 302 MEFMQEHKVTVLFLVDEAGMPEGILHIHDLLRAGV 336


>gi|71737849|ref|YP_276268.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257483487|ref|ZP_05637528.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
 gi|298488496|ref|ZP_07006526.1| Arabinose 5-phosphate isomerase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|71558402|gb|AAZ37613.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298156837|gb|EFH97927.1| Arabinose 5-phosphate isomerase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322488|gb|EFW78581.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. B076]
 gi|320330043|gb|EFW86030.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. race 4]
 gi|330888615|gb|EGH21276.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. mori str.
           301020]
 gi|330987096|gb|EGH85199.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011540|gb|EGH91596.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. tabaci
           ATCC 11528]
          Length = 324

 Score =  351 bits (902), Expect = 7e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQYDRPVGAFNLQDLLRAGVM 324


>gi|289627575|ref|ZP_06460529.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|289647001|ref|ZP_06478344.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. 2250]
 gi|330869986|gb|EGH04695.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 324

 Score =  351 bits (902), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 141/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +SV+A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESVLAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQYDRPVGAFNLQDLLRAGVM 324


>gi|330875119|gb|EGH09268.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. glycinea
           str. race 4]
          Length = 324

 Score =  351 bits (901), Expect = 8e-95,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS+ E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTHEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSGD++P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R   +  D+    +++VM  + K    + L   A++++  + IS 
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAHAEKLAAEALKIMEDNKISA 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD   + +G  +  DLLR G++
Sbjct: 300 LVVVDQYDRPVGAFNLQDLLRAGVM 324


>gi|299068028|emb|CBJ39242.1| Arabinose-5-phosphate isomerase [Ralstonia solanacearum CMR15]
          Length = 327

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 139/328 (42%), Positives = 195/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +   +  +  A ++   E + +  L+S    ++S  F  AVE +    GRVV++GIGKSG
Sbjct: 4   NFNPDRALALAQQTFDIEAQAVLGLKS----QVSADFARAVEMVLRCTGRVVVSGIGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD+ I  S SG   EL AIL   +R
Sbjct: 60  HIARKVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVFIGFSNSGEVSELTAILPLVKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T   +S +A HAD+VL    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 120 LGARLIAVTGNPQSSLAQHADVVLNSRVEVEACPLNLAPTASTTAQMALGDALAVALLDA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F  +DF   HPGG LG        D+M  GD++P V    PL  A+  ++ K     A
Sbjct: 180 RGFGADDFARSHPGGSLGRKLLTHVRDIMRQGDAVPRVTADTPLSQALMEITRKGMAMTA 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   +  G+ T+GD+ R     +D  T+ + +VM +NP  +  D L   A++++  H 
Sbjct: 240 VVDAAGRAVGVFTDGDLRRLLETPRDWRTVPMHEVMHRNPHAVGPDQLAVEAVEVMETHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ L+VVD   + +G +H  DL R  +I
Sbjct: 300 INQLLVVDAAGQLMGALHIHDLTRAKVI 327


>gi|150377115|ref|YP_001313711.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150031662|gb|ABR63778.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 333

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 152/321 (47%), Positives = 212/321 (66%), Gaps = 2/321 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           + ++   R++     G+ +L   L      +     AVE +    GRVV++G+GKSGHIG
Sbjct: 12  TVLESIGRTLATATNGIRALADHLSSDETFADALVNAVELMGDGDGRVVVSGVGKSGHIG 71

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + EL  +L YA+RF +
Sbjct: 72  RKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETAELANMLTYAKRFKV 131

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I+I S  +S +A ++++ L LPK PE+CPHGLAPTTSA++QLAIGDALAIALLE R F
Sbjct: 132 PIISICSNRESTLARNSEVALVLPKVPEACPHGLAPTTSAMLQLAIGDALAIALLERRGF 191

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  +S K FG V +VDE
Sbjct: 192 SAEDFKTFHPGGKLGAQLRLVHELAHGAGQMPLLPVGRPMSEAVIEMSAKGFGVVGIVDE 251

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             KL G+IT+GD+ R+   DL    VE +M  NP+V+  D L + AM+ + +H I+VL +
Sbjct: 252 SGKLVGVITDGDMRRHMTADLLAQPVEAIMSHNPRVLSRDVLASAAMEFMEEHKITVLFL 311

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V D    +GI+H  DLLR G+
Sbjct: 312 VGDAGAPVGILHIHDLLRAGV 332


>gi|13472656|ref|NP_104223.1| hypothetical protein mll3023 [Mesorhizobium loti MAFF303099]
 gi|14023403|dbj|BAB50009.1| mll3023 [Mesorhizobium loti MAFF303099]
          Length = 333

 Score =  351 bits (901), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 169/333 (50%), Positives = 235/333 (70%), Gaps = 3/333 (0%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H +S+ +K   L + +++  ALR++  E+ G+++L  +L+  L+  F  AV+ I  I+GR
Sbjct: 2   HARSLDKK--PLDRQASIDSALRTVATEQAGIAALAEALENGLAAPFAQAVDMISKIEGR 59

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSGHIGSK+A+TLASTGTP+FFVH  EA+HGDLGMI +DD II +SWSG S E
Sbjct: 60  LIVTGVGKSGHIGSKIAATLASTGTPAFFVHPVEANHGDLGMIAKDDAIIAISWSGESKE 119

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  I+ Y+RRFSIPLIA+TS   S +A  AD+VL LP+ PE+CPHGLAPTTS ++QL IG
Sbjct: 120 MLGIVAYSRRFSIPLIAVTSGETSALARAADVVLLLPRTPEACPHGLAPTTSTLLQLVIG 179

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALAIALLE+R F+ + F   HPGG+LG      S++M  GD +PL  +G  + +A+  L
Sbjct: 180 DALAIALLEARGFTPDHFRTFHPGGQLGANLTMVSEIMRVGDQMPLAVLGTKMPEAVMTL 239

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S+K+ GCV +VD   +L GIIT+GD+ RN H++L  + V++VM + PK +   TL   A+
Sbjct: 240 SQKKVGCVLIVDANGELAGIITDGDVARNLHRNLADVIVDEVMTRTPKTVDPQTLAGTAI 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            LL +HNI  L VV      +G+VHF DLLR G
Sbjct: 300 ALLNEHNIGAL-VVTRNNMPLGVVHFHDLLRIG 331


>gi|85058182|ref|YP_453884.1| D-arabinose 5-phosphate isomerase [Sodalis glossinidius str.
           'morsitans']
 gi|84778702|dbj|BAE73479.1| putative isomerase [Sodalis glossinidius str. 'morsitans']
          Length = 328

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 187/323 (57%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +      +  E+ GL+ L+  +  +    F  A E +    G+VV+ G+GKSGHIG K
Sbjct: 11  DFIAAGKEVLAIERAGLAQLDQYINDD----FRRACEALFRCAGKVVVMGMGKSGHIGRK 66

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+T ASTGTP+FFVH  EASHGDLGM++  D++I LS SG S E+ A++   +R  IPL
Sbjct: 67  LAATFASTGTPAFFVHPGEASHGDLGMVSPQDIVIALSNSGESHEILALIPVLKRLHIPL 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T + +S +   A+I L +    E+CP GLAPT S    L +GDALA+ALL +R F+ 
Sbjct: 127 ICLTGKPESTMGKAAEIHLCVHVPEEACPLGLAPTASTTAALVMGDALAVALLRARGFTA 186

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +  SD+MHSGD +PL      L DA+  ++ K  G   + D  
Sbjct: 187 EDFALSHPGGALGRKLLLRVSDIMHSGDEMPLTARTASLRDALLEITRKNLGMTVICDAQ 246

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             + GI T+GD+ R F    DL    + DVM      +  DTL   A+ L++  NI+ LM
Sbjct: 247 NVIVGIFTDGDLRRVFDMGIDLKEARIADVMTPGGVRVAPDTLAVEALNLIQARNITSLM 306

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V  D    +G+VH  D+LR G+I
Sbjct: 307 VAQDD-HLLGVVHMHDMLRAGVI 328


>gi|239996750|ref|ZP_04717274.1| arabinose 5-phosphate isomerase [Alteromonas macleodii ATCC 27126]
          Length = 326

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 131/323 (40%), Positives = 198/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A R I  E + +++L   L  E    F  A   + A KG+VV++G+GKSGHIG+K
Sbjct: 8   NYIDSAKRVIEIETQAIANLAERLNNE----FIAACNILFACKGKVVVSGMGKSGHIGNK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FF+H  EA+HGDLGM+++ D+++ +S SG ++EL  +L   +R  I +
Sbjct: 64  IAATLASTGTPAFFMHPGEANHGDLGMLSKGDVLLAISNSGETNELVNLLPVVKRLGIQV 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T+   S +  HAD+VL +  E E+C  GLAPT+S    L +GDALA+ALL+ + F+ 
Sbjct: 124 VAMTNSASSSLGQHADVVLDISVEKEACSLGLAPTSSTTATLVMGDALAVALLDQKGFTS 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HPGG LG    +  SD+M SG  IPLV     + DA+  +S+K  G   V+   
Sbjct: 184 DDFALSHPGGSLGRKLLLKVSDIMLSGSDIPLVHASASVADALLEISKKGLGMTGVIAAD 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+ T+GD+ R      D+++ +VE+VM K  K      L   A+ L+  H IS LM
Sbjct: 244 GTLTGVFTDGDLRRILDARVDVHSATVEEVMTKGGKTTTAGQLAVEALNLMETHKISALM 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V DD +K +G  +   LL+ G++
Sbjct: 304 VTDDKRKPVGAFNMHMLLKAGVL 326


>gi|188591126|ref|YP_001795726.1| arabinose-5-phosphate isomerase [Cupriavidus taiwanensis LMG 19424]
 gi|170938020|emb|CAP63004.1| Arabinose-5-phosphate isomerase [Cupriavidus taiwanensis LMG 19424]
          Length = 338

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 197/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A  ++  E   +S+L   L G+    F  AV+ I    GRVV++GIGKSGHIG 
Sbjct: 19  DRALRLARDTLQTEADAVSALSGRLNGD----FAHAVQLILQCTGRVVVSGIGKSGHIGR 74

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD++I  S SG + EL +I+   +R    
Sbjct: 75  KVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGAR 134

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T    S +A  AD+ L    E E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 135 LISVTGNPDSNLAKLADVHLDAAVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 194

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF   HPGG LG        DVM +G+++P V+   PL  A+  ++ K     AVVD 
Sbjct: 195 EEDFARSHPGGALGRKLLTHVRDVMRTGNAVPEVRESTPLAQALMEITRKGMAMTAVVDP 254

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  G+ T+GD+ R     +D  T+ + +VM +NP V+ +D L   A+Q++  + I+ L
Sbjct: 255 DGRAIGVFTDGDLRRLLETPRDWKTVPIGEVMHRNPHVVNQDQLAVEAVQVMEANRINQL 314

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVDD  +  G +H  DL R  +I
Sbjct: 315 LVVDDDGRLAGALHIHDLTRAKVI 338


>gi|167568733|ref|ZP_02361607.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis C6786]
          Length = 327

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 193/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALADQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISHSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM +G  +P V +   L DA+  ++ KR G  AVVDE
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRTGGEVPTVTLDSTLSDALFQITAKRMGMTAVVDE 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM +NP+ I  D L   A++L+ +H I+ +
Sbjct: 244 AGRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDEQGALIGALNMHDLFSKKVI 327


>gi|156935721|ref|YP_001439637.1| D-arabinose 5-phosphate isomerase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156533975|gb|ABU78801.1| hypothetical protein ESA_03590 [Cronobacter sakazakii ATCC BAA-894]
          Length = 334

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 195/323 (60%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
              Q     +  E+ GL  L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K
Sbjct: 17  DFEQAGKEVLTIERAGLEQLDQYINAD----FARACESMFYCRGKVVVMGMGKSGHIGKK 72

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGDLGM++  D++I +S SG S+E+ A++   +R  + L
Sbjct: 73  MAATLASTGTPSFFVHPAEASHGDLGMVSAQDIVIAISNSGESNEILALIPVLKRLQVQL 132

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T   +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+ 
Sbjct: 133 ICMTGRPESAMAKAADIHLCVKVPHEACPLGLAPTSSTTATLVMGDALAVALLKARGFTA 192

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+ 
Sbjct: 193 EDFALSHPGGALGRKLLLRVNDIMHTGDEIPHVSKEASLRDALLEITRKNLGMTVICDDL 252

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            K++G+ T+GD+ R F    DL+ + + DVM      +   TL   A+ L++  +I+ +M
Sbjct: 253 MKIEGVFTDGDLRRVFDMGGDLHQMKIVDVMTPGGIRVRPGTLAVDALNLMQSRHITSVM 312

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D  Q   G++H  DLLR G++
Sbjct: 313 VADGDQ-LRGVIHMHDLLRAGVV 334


>gi|224826293|ref|ZP_03699395.1| KpsF/GutQ family protein [Lutiella nitroferrum 2002]
 gi|224601394|gb|EEG07575.1| KpsF/GutQ family protein [Lutiella nitroferrum 2002]
          Length = 326

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 149/326 (45%), Positives = 211/326 (64%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++  ++ A R +  E   + +L + L G     F  A++ I A  GR+V+TGIGKSGHI
Sbjct: 5   VQHERLEQAQRVLEIEADAILALRARLDG----AFLAAIDAILACAGRLVVTGIGKSGHI 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA+HGDLGMIT  D+++ LS SG SDE+ A+L   +R  
Sbjct: 61  GRKIAATLASTGTPAFFVHPAEAAHGDLGMITDGDVLLALSNSGESDEVIALLPALKRKD 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I LIA+T    S +A  ADI L    E E+CP GLAPT+S    LA+GDALA+ LLE+R+
Sbjct: 121 ITLIAMTGRPDSTLAREADIHLDAAVEMEACPLGLAPTSSTTAALALGDALAVTLLEARS 180

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F E DF + HPGG LG    V   D+MH+GD++P+V+ G  L DA+  ++ K  G  AVV
Sbjct: 181 FREEDFALSHPGGSLGRRLLVHVRDLMHAGDTLPVVQSGTTLKDALLEMTRKGLGMTAVV 240

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    L GI T+GD+ R   K  DL+ L+++DVM + P+ I  + L + A++L+  H ++
Sbjct: 241 DASANLVGIFTDGDLRRTLDKTLDLSGLAIDDVMFRQPRTISAERLASEAVKLMETHKVN 300

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVDD    +G ++  DLL+  I+
Sbjct: 301 GLLVVDDAGHLVGALNMHDLLQARIV 326


>gi|254435747|ref|ZP_05049254.1| sugar isomerase, KpsF/GutQ family [Nitrosococcus oceani AFC27]
 gi|207088858|gb|EDZ66130.1| sugar isomerase, KpsF/GutQ family [Nitrosococcus oceani AFC27]
          Length = 322

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 137/326 (42%), Positives = 197/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +Q     I  E   +++L + + G     F  A + + A +GR+VI G+GKSGHI
Sbjct: 1   MDKRLIQLGAAVIDTEAHAIAALRTRING----NFAAACKYMLACEGRIVILGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG ++E+  IL   +R  
Sbjct: 57  GGKIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PLIA+T + +S +   ADI + +  E E+CP GLAPT S+   LA+GDALAIALLESR 
Sbjct: 117 VPLIALTGQPRSTLGKVADIHIDISVEKEACPLGLAPTASSTATLAMGDALAIALLESRG 176

Query: 199 FSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HP G     L +  SD+MH G+ IP +     L  A+  ++ K  G  AVV
Sbjct: 177 FTAEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAIPENVLLSSALLEMTRKGLGMTAVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +      GI T+GD+ R   +  D++   +  +M  N K +  D L   A+Q++++H I+
Sbjct: 237 NAQNHAVGIFTDGDLRRALDQGIDVHITPIAKIMTANCKTLGPDLLAAEALQIMQRHRIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD  Q+ IG ++  DLLR G++
Sbjct: 297 ALLVVDTEQRLIGALNMHDLLRAGVL 322


>gi|325265999|ref|ZP_08132685.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
 gi|324982637|gb|EGC18263.1| arabinose 5-phosphate isomerase [Kingella denitrificans ATCC 33394]
          Length = 322

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 137/321 (42%), Positives = 201/321 (62%), Gaps = 8/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A + +  E + +  + + L G     F  AV+ +   +GRV++TG+GKSGHIG K+A
Sbjct: 7   LDWAKQVLQIEAQSVLEMAAQLDG----AFARAVDAVLQSRGRVIVTGMGKSGHIGRKIA 62

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+ AI+   +R  I LI 
Sbjct: 63  ATLASTGTPAFFVHPAEAAHGDLGMIVDGDVVLAISNSGESDEILAIMPALKRRHITLIC 122

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT + +S +A HADI +      E+CP GLAPT+S    LA+GDALAIALL +R F+  D
Sbjct: 123 ITGKPESSMAKHADIHIRAAVSQEACPLGLAPTSSTTAVLALGDALAIALLNARQFTPED 182

Query: 204 FYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G LG    +   DVMHSGD++P+V+    L +AI  +S K  G VAV D    
Sbjct: 183 FALSHPAGSLGRRLLLTVGDVMHSGDALPVVRPESSLREAIIQMSGKGLGMVAVADGAGC 242

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R F +   L  L + +VM ++P  I  + LL+ A++L+++  I+ L V 
Sbjct: 243 LAGVFTDGDLRRLFERHEQLPDLPMSEVMTRHPATISPEKLLSEALKLMQEKRINGLPVC 302

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
            +  + +G ++  DLL+  I+
Sbjct: 303 -EGGRLVGALNMYDLLKARIV 322


>gi|300313255|ref|YP_003777347.1| sugar phosphate isomerase [Herbaspirillum seropedicae SmR1]
 gi|124483562|emb|CAM32654.1| Sugar phosphate isomerase (involved in capsule formation) protein
           [Herbaspirillum seropedicae]
 gi|300076040|gb|ADJ65439.1| sugar phosphate isomerase (involved in capsule formation) protein
           [Herbaspirillum seropedicae SmR1]
          Length = 342

 Score =  351 bits (900), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 127/342 (37%), Positives = 191/342 (55%), Gaps = 3/342 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              +  K+      +      ++ A +++  E   + +L++ L  + S     AV  +  
Sbjct: 1   MSVTDDKTTPASFSAGAARRAIELARQTLQIEADAILALKNRLGDDASEPLAQAVHLLLQ 60

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GR V++GIGKSGHIG K+A+TLASTGTPS F+H AEA+HGDLGM+T +D+ I +S SG
Sbjct: 61  CNGRAVVSGIGKSGHIGRKIAATLASTGTPSLFMHPAEAAHGDLGMVTPNDVFIAISNSG 120

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL AI+   +R    +IA+T  + S +A  A++ L +  + E+C   LAPT S    
Sbjct: 121 ETGELMAIMPIVKRMGAVIIAMTGNDNSSLARMANVHLNVGVDKEACTLNLAPTASTTAT 180

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA++LL++R F E DF   HPGG LG        DVM SGD+IP V     L  
Sbjct: 181 LAMGDALAVSLLDARGFLEEDFARSHPGGALGRRLLTHVRDVMRSGDAIPAVSPDVSLSQ 240

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+  ++ K     AVVD   +  G+ T+GD+ R   +  D +   + ++M  NP+ + +D
Sbjct: 241 ALMEITRKGMAMTAVVDADFRPIGVFTDGDLRRLLERGQDFSQFRIAEIMHANPRTVNQD 300

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A+QL+ +  I+ L+V D      G +H  DL R  +I
Sbjct: 301 QLAVDAVQLMEEFRINQLLVTDAQGVLTGALHIHDLTRAKVI 342


>gi|294634661|ref|ZP_06713194.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
 gi|291091907|gb|EFE24468.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
          Length = 328

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A E +   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLRIEREGLAQLDHFINQD----FVQACEAMLRCRGKVVVMGMGKSGHIGRKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH  EASHGDLGM+   D+++ +S SG S E++A++   +R ++ LI +
Sbjct: 70  TLASTGTSSFFVHPGEASHGDLGMVEARDVVLAISNSGESQEIQALIPVLKRQNVTLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPESAMGRAADIHLCIRVPQEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD +P V     L DA+  ++ K  G   +      +
Sbjct: 190 AMSHPGGALGRKLLLRVSDIMHSGDEVPTVNPAASLRDALLEITRKNLGLTVICGPDAHI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    +LN   + DVM +    I    L   A+ L++  +I+ L+V +
Sbjct: 250 EGIFTDGDLRRIFDMGINLNDAKIADVMTRGGIRIRPTALAVEALNLMQDRHITSLLVAE 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + Q  +G+VH  D+LR G++
Sbjct: 310 NDQ-LLGVVHMHDMLRAGVV 328


>gi|88861159|ref|ZP_01135793.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas tunicata D2]
 gi|88816881|gb|EAR26702.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas tunicata D2]
          Length = 323

 Score =  350 bits (899), Expect = 1e-94,   Method: Composition-based stats.
 Identities = 127/327 (38%), Positives = 203/327 (62%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +++   +  A R +  EK+ +  L   +       F  A + +   +GR+++ G+GKSGH
Sbjct: 1   MLQPEFIASATRVLAIEKQAIEQLNQYI----DAHFAHACQIMFNCQGRIIVIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTG+P+FFVH  EASHGDLGMIT+DD+++++S SG + E+  I+   +R 
Sbjct: 57  IGNKIAATLASTGSPAFFVHPGEASHGDLGMITKDDVVLLISNSGETSEVLGIVPVLKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T   +S +A H+D+ + +  E E+CP GLAPT S    L +GDALA+ALLE++
Sbjct: 117 GAKMIAMTGNTQSSLATHSDVHICIKVEQEACPLGLAPTASTTATLVMGDALAVALLEAK 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG    +   D+MH+GD++P V     + DA+  +S K  G   +
Sbjct: 177 GFTADDFALSHPGGSLGRRLLLTLKDIMHTGDAMPKVSSDAIIRDALIEMSAKGLGMTTI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L G+ T+GD+ R   +  D++T S++ VM KN      D L   A+ ++ +  I
Sbjct: 237 VDSDNRLLGLFTDGDLRRILEQKIDIHTTSIQAVMTKNCTTASCDMLAAEALNIMERKRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L++V+   +AIG ++  DLLR G+I
Sbjct: 297 NGLLIVNQQNQAIGALNMQDLLRAGVI 323


>gi|157963425|ref|YP_001503459.1| KpsF/GutQ family protein [Shewanella pealeana ATCC 700345]
 gi|157848425|gb|ABV88924.1| KpsF/GutQ family protein [Shewanella pealeana ATCC 700345]
          Length = 325

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +N   Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGH
Sbjct: 2   VDENQLRQWGTKVIDIEKQALDNLYQYID---SSEFAQACQLILQCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRM 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +P+I++T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R
Sbjct: 119 GLPMISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQAR 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+++DF + HPGG LG    +  SDVMH GD +P V+    + DA+  +S+K  G  AV
Sbjct: 179 GFTQDDFALSHPGGSLGRKLLLKVSDVMHKGDELPRVQDNICITDALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD    L GI T+GD+ R    D+N  T  + DVM K    I E+ L   A++++   +I
Sbjct: 239 VDSNNTLVGIFTDGDLRRVIDADVNLRTTPIADVMTKGCVTITENVLAAEALKVMDTKSI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V++D Q+ +G ++ LD+++ G+I
Sbjct: 299 NGLVVINDKQQPVGALNMLDMVKAGVI 325


>gi|77919539|ref|YP_357354.1| arabinose-5-phosphate isomerase [Pelobacter carbinolicus DSM 2380]
 gi|77545622|gb|ABA89184.1| arabinose-5-phosphate isomerase [Pelobacter carbinolicus DSM 2380]
          Length = 320

 Score =  350 bits (899), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 196/323 (60%), Gaps = 9/323 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R +  E   + ++   L       F  AVE I + +GRVVITG+GKSG I  K+A
Sbjct: 2   LDTARRVLQVEADAIVAMAQRLDER----FVAAVELILSCQGRVVITGMGKSGLICQKIA 57

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FF+H AE  HGDLGM+ + D++I +S SG+++E+  IL   +R  +PLIA
Sbjct: 58  ATMASTGTPAFFLHPAEGIHGDLGMLMKGDVVIAVSNSGNTEEIVRILPVIKRMGLPLIA 117

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +    +S +A  AD++L +    E+CP GLAPT S    LA+GDALA+ALLE R F E D
Sbjct: 118 MAGHPESALARAADVLLNVAVREEACPLGLAPTASTTATLAMGDALAVALLERRGFREED 177

Query: 204 FYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG    +   D+MH+G  IPL  +  PL DA+  +S K+ G   V++   +
Sbjct: 178 FALFHPGGALGKKLLLTVEDLMHTGSDIPLASLTTPLKDALFEISSKKLGITGVLNATGE 237

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G+ T+GD+ R   +  D+  L + DVM  +PK IL   L   A+Q + + +I+ L V 
Sbjct: 238 LVGVFTDGDLRRTMGRGCDVLDLPLGDVMSCHPKRILRSNLAAKAVQKMEEFSITSLFVF 297

Query: 321 DDCQ--KAIGIVHFLDLLRFGII 341
           DD      +GI+H  DLL+ G++
Sbjct: 298 DDDDSTVPVGIIHLHDLLKAGVV 320


>gi|154245839|ref|YP_001416797.1| KpsF/GutQ family protein [Xanthobacter autotrophicus Py2]
 gi|154159924|gb|ABS67140.1| KpsF/GutQ family protein [Xanthobacter autotrophicus Py2]
          Length = 338

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 161/338 (47%), Positives = 218/338 (64%), Gaps = 1/338 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              S    V       +  ++V  AL ++ AEK GL++L  ++ G L   F  AV  I+ 
Sbjct: 1   MMRSPANKVPADDGPHVHPASVVSALATLDAEKAGLAALAEAMAGPLGAAFDVAVATIQN 60

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GRV++TG+GKSGH+  K+A+TLASTGTP+ +VH AEASHGDLGMIT DD+I+ LSWSG
Sbjct: 61  SHGRVIVTGMGKSGHVARKIAATLASTGTPAHYVHPAEASHGDLGMITTDDVIVALSWSG 120

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  I+ Y+RRF +PLIA TS  +S +A  A +VL+LP   E+CPHGLAPTTS +MQ
Sbjct: 121 ETVELHDIVDYSRRFDVPLIAFTSNTESALASSASVVLSLPVAQEACPHGLAPTTSTLMQ 180

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALA+ALL+SR F+  DF   HPGGKLG       DVM  GD++P+V  G  +  A
Sbjct: 181 LALGDALAVALLQSRGFTALDFRQFHPGGKLGASLKFVRDVMRQGDAVPVVAAGTLMGAA 240

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +  +S K  GCV VV     L GI+T+GD+ R+   DL T +V+++M   PK +  D L 
Sbjct: 241 LVEMSTKGLGCVGVVGPDGALTGIVTDGDLRRHMANDLPTRTVDEIMTAAPKTVRPDQLA 300

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + A+ +L    I+ LMVV + Q  +G++H  DLL  GI
Sbjct: 301 SEALNILNSRKITALMVV-EGQAPVGVLHIHDLLLTGI 337


>gi|158422330|ref|YP_001523622.1| sugar isomerase [Azorhizobium caulinodans ORS 571]
 gi|158329219|dbj|BAF86704.1| sugar isomerase [Azorhizobium caulinodans ORS 571]
          Length = 354

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 153/326 (46%), Positives = 218/326 (66%), Gaps = 1/326 (0%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             +  ++  +  AL ++  E  GL++L +++   L   F  AV  I   KGRV++TG+GK
Sbjct: 29  SVTETRSPAIASALSTLETEAAGLAALIAAVGNGLGEAFEAAVATILGAKGRVIVTGMGK 88

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGH+  K+A+TLASTGTP+ +VH AEASHGDLGM+  +D+II LSWSG + EL+ I+ YA
Sbjct: 89  SGHVARKIAATLASTGTPAHYVHPAEASHGDLGMVAPEDVIIGLSWSGETAELRDIVDYA 148

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            RF +PLIAITS  +S +A  A +VL LP  PE+CP GLAPTTS +MQLA+GDALA+ALL
Sbjct: 149 LRFDVPLIAITSNRESALARAARVVLALPLSPEACPLGLAPTTSTLMQLAMGDALAVALL 208

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           ESR F+  DF   HPGGKLG       DVM +G+++PL + G  + + +  +S K  GCV
Sbjct: 209 ESRGFTAKDFRTFHPGGKLGANLKFVRDVMRAGEALPLARSGALMGEVLVEMSAKGLGCV 268

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           AV+D   +L GI+T+GD+ R+   DL +  V+ +M ++PK I  D +++ A++LL    I
Sbjct: 269 AVLDGDGRLAGIVTDGDLRRHMANDLPSRPVDAIMSRSPKTIRPDQMVSEALRLLNTAKI 328

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + LMVV +  + +G +H  DLL  G+
Sbjct: 329 TALMVV-EDGRPVGAIHIHDLLHVGV 353


>gi|332525680|ref|ZP_08401829.1| KpsF/GutQ family protein [Rubrivivax benzoatilyticus JA2]
 gi|332109239|gb|EGJ10162.1| KpsF/GutQ family protein [Rubrivivax benzoatilyticus JA2]
          Length = 329

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 136/333 (40%), Positives = 193/333 (57%), Gaps = 7/333 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
                       ++ A R+   E R L  L    +      F  AV+ +   +GRVV+ G
Sbjct: 1   MTSPRPFDPQRALELAARTFEIEARALLGLAERQR----EGFPAAVQAMLECRGRVVVMG 56

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+   D+++ +S SG  DEL AIL
Sbjct: 57  MGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMLIAGDVVLAISNSGEVDELAAIL 116

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              RR  + +I +T +  S +A H+D VL+   + E+CP  LAPT S   Q+A+GDALA+
Sbjct: 117 PALRRLGVTIIGMTGKPGSTLARHSDHVLSCAVDQEACPLNLAPTASTTAQIALGDALAV 176

Query: 192 ALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALL++R F E DF   HPGG LG    +   D+M SGD++P V  G    D +  ++ K 
Sbjct: 177 ALLDARGFREEDFARSHPGGSLGRKLLMHVRDLMRSGDAVPRVDAGASFADVLREMTRKG 236

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G  A+VD   +  GI T+GD+ R   +  DL  L+  DVM   P++I ED L   A  L
Sbjct: 237 LGFTALVDADGRPVGIFTDGDLRRLIERGADLRDLTAGDVMHAGPRLIAEDALAVDAAGL 296

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + QH I+ ++ VD   + +G ++  DL+R  +I
Sbjct: 297 MEQHRITSVLAVDAEGRLVGALNSNDLMRAKVI 329


>gi|257092272|ref|YP_003165913.1| KpsF/GutQ family protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257044796|gb|ACV33984.1| KpsF/GutQ family protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 327

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 186/323 (57%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A + +  E   + +L   + G     F  A+  +   +GRV+++G+GKSGH+G K
Sbjct: 9   QALDLARQVLRIEADAVLALADRIDG----AFLQALRLVLNCRGRVIVSGMGKSGHVGRK 64

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +ASTLASTGTP+FFVH AEASHGDLGMITRDD++I +S SG S EL  I+   +R    L
Sbjct: 65  IASTLASTGTPAFFVHPAEASHGDLGMITRDDVLIAISNSGESAELLTIVPSIKRQGARL 124

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+ALL++R F  
Sbjct: 125 ISMTGNRSSSLAVEADVHLDAAVAQEACPLNLAPTASTTAVLALGDALAVALLDARGFGP 184

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVM  G +IP V     +  AI  +S    G  AVV   
Sbjct: 185 EDFARSHPGGSLGRRLLTHVRDVMRVGAAIPEVDPATSVPAAILEISRGGIGMTAVVTAE 244

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +++ G++T+GD+ R F +  D   L V D+M + P+ I  D L   A++++ QH I+ L 
Sbjct: 245 RRVIGVVTDGDLRRAFGREADPRHLFVTDIMGRQPRSIGPDRLAVEAVEMMEQHKINQLP 304

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD     +G ++  DL +  +I
Sbjct: 305 VVDATGVLVGALNMHDLFKAKVI 327


>gi|220933911|ref|YP_002512810.1| Arabinose-5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995221|gb|ACL71823.1| Arabinose-5-phosphate isomerase [Thioalkalivibrio sp. HL-EbGR7]
          Length = 325

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 133/329 (40%), Positives = 198/329 (60%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             L  + T Q A+  +  E + +  L+  +      QF  A + +    GR+V+TG+GKS
Sbjct: 1   MKLHPDQTRQLAIAVLDTEAQAILDLKERI----DDQFIRACKFLLGCTGRIVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIGSK+A+TLASTG+P+FFVH  EASHGDLGMIT  D+++ +S SG +DEL  IL   R
Sbjct: 57  GHIGSKIAATLASTGSPAFFVHPGEASHGDLGMITAGDVVLAMSNSGETDELLTILPIIR 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  +PLIA+T    S +A  A + L +    E+CP GLAPT+S    LA+GDALA++LLE
Sbjct: 117 RLGVPLIAMTGNKGSTLAREATVSLDISVAKEACPLGLAPTSSTTATLALGDALAVSLLE 176

Query: 196 SRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF   HP G     L +  +D+MH+G+ IP V    PL +A+  ++ +  G  
Sbjct: 177 ARGFTADDFARSHPGGRLGRRLLLHVADIMHTGERIPRVGADAPLREALLEITRQGLGMT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            VVD   ++ G+ T+GD+ R   K  D++  ++ ++M +  K      L   A++L+  H
Sbjct: 237 VVVDAEDQVMGVYTDGDLRRTLDKGIDVHNTTIGEIMTRQFKQARPAMLAVEALKLMEDH 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            IS L V+DD  K +G ++  DLLR G++
Sbjct: 297 KISALPVMDDEGKLMGALNMHDLLRSGVV 325


>gi|292486809|ref|YP_003529679.1| putative isomerase [Erwinia amylovora CFBP1430]
 gi|292900793|ref|YP_003540162.1| arabinose 5-phosphate isomerase [Erwinia amylovora ATCC 49946]
 gi|291200641|emb|CBJ47773.1| arabinose 5-phosphate isomerase [Erwinia amylovora ATCC 49946]
 gi|291552226|emb|CBA19263.1| putative isomerase [Erwinia amylovora CFBP1430]
 gi|312170877|emb|CBX79136.1| putative isomerase [Erwinia amylovora ATCC BAA-2158]
          Length = 329

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F    + I   +G+VV+ G+GKSGHIG K+A+
Sbjct: 15  QAGKEVLQIEREGLEQLDRYINDD----FTRTCDLIYRCRGKVVVMGMGKSGHIGKKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM+T DD++I +S SG S E+ A++   +R  + LI I
Sbjct: 71  TFASTGTPAFFVHPAEASHGDLGMVTSDDVVIAISNSGESSEILALIPVLKRLHVTLICI 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F++ DF
Sbjct: 131 TSRPESAMGRAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTQEDF 190

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   D+MH G+ +P V     L +A+  +++K  G   + D   ++
Sbjct: 191 ALSHPGGALGRKLLLRVDDIMHCGNDMPHVSRDASLRNALLEMTQKNMGMTVICDAAMQI 250

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+   S+E VM      +   TL   A+ L++  NI+ +MV  
Sbjct: 251 GGIFTDGDLRRIFDMGIDIQHASIESVMTPGGIRVRPGTLAVDALNLMQTRNITCVMVA- 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G++H  D+LR G++
Sbjct: 310 ENNRLLGVIHMHDMLRAGVV 329


>gi|307307061|ref|ZP_07586800.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306902001|gb|EFN32600.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 336

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 152/335 (45%), Positives = 217/335 (64%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            +  T   H+    + ++   R++     G+ +L   L      +     AVE +    G
Sbjct: 3   VRHATADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDG 60

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT + FVH  EASHGDLGMIT  D +++LSWSG + 
Sbjct: 61  RVVVSGVGKSGHIGRKIAATLASTGTSAHFVHPTEASHGDLGMITAQDALVLLSWSGETA 120

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I S  +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 121 ELANMLTYAKRFKVPIVSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 180

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  
Sbjct: 181 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIE 240

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V + DE  KL G+IT+GD+ R+   DL    V++VM +NP+VI  D L + A
Sbjct: 241 MSAKGFGVVGITDESGKLIGVITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAA 300

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ ++ H ++VL +VD+    +GI+H  DLLR G+
Sbjct: 301 MEFMQDHKVTVLFLVDEAGAPVGILHIHDLLRAGV 335


>gi|304411206|ref|ZP_07392821.1| KpsF/GutQ family protein [Shewanella baltica OS183]
 gi|307306501|ref|ZP_07586244.1| KpsF/GutQ family protein [Shewanella baltica BA175]
 gi|304350399|gb|EFM14802.1| KpsF/GutQ family protein [Shewanella baltica OS183]
 gi|306910792|gb|EFN41220.1| KpsF/GutQ family protein [Shewanella baltica BA175]
          Length = 359

 Score =  350 bits (898), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 131/337 (38%), Positives = 208/337 (61%), Gaps = 7/337 (2%)

Query: 9   KSVTRKGHSLMKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
           K   ++   ++  S + Q   + I  EK  L +L   +    S +F  A E I    G+V
Sbjct: 26  KDNAKREIDMVDKSQLRQWGCKVIDIEKSALDNLYQYVD---SAEFAEACELILNCTGKV 82

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           ++ G+GKSGHIG+K+++TLASTGTP+FFVH  EASHGDLG++  +D+I+ +S SG S E+
Sbjct: 83  IVMGMGKSGHIGNKISATLASTGTPAFFVHPGEASHGDLGVLADNDVILAISNSGESSEI 142

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             ++   +R  +P+IA+T + +S +A  + + L +    E+CP GLAPT+S    L +GD
Sbjct: 143 LTLMPVIQRMGVPVIAVTGKPESNMARLSKVHLCIEVPEEACPLGLAPTSSTTATLVMGD 202

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           A+AIALL+++ F+ +DF + HPGG LG    +   DVMHSGD +PLV     + +A+  +
Sbjct: 203 AIAIALLQAKGFTRDDFAMSHPGGALGRKLLLKVCDVMHSGDDLPLVNHDICITEALYEI 262

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           S+K  G  A++D+ +KL GI T+GD+ R      +L T  + DVM +N   I +  L   
Sbjct: 263 SKKGLGMTAIIDDQRKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCVTITDGVLAAQ 322

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A+Q++   NI+ L+V+D  +  IG ++ LD+++ G+I
Sbjct: 323 ALQVMDSKNINGLIVIDKDRHPIGALNMLDMVKAGVI 359


>gi|262373039|ref|ZP_06066318.1| arabinose 5-phosphate isomerase [Acinetobacter junii SH205]
 gi|262313064|gb|EEY94149.1| arabinose 5-phosphate isomerase [Acinetobacter junii SH205]
          Length = 325

 Score =  349 bits (897), Expect = 2e-94,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 192/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L + +       F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KIALETLRIEQQAIEVLATQIDER----FDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVPLTLGAADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VDE  +L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGSELPKVKPDTPMNKVLYEISDKRLGLTTIVDEQDRL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R           L V +VM KNP  + ++     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRMIDHQQGFDVNLPVAEVMTKNPLTVSQEARAVEALEKMHERKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K IG++   DL++ G+
Sbjct: 305 DDANKVIGVISMHDLIQAGV 324


>gi|113866420|ref|YP_724909.1| sugar phosphate isomerase involved in capsule formation [Ralstonia
           eutropha H16]
 gi|113525196|emb|CAJ91541.1| predicted sugar phosphate isomerase involved in capsule formation
           [Ralstonia eutropha H16]
          Length = 333

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A  ++  E   +S+L   L G+    F  AV  I    GRVV++GIGKSGHIG 
Sbjct: 14  DRALRLARDTLQTEADAVSALSGRLNGD----FARAVLLILQCTGRVVVSGIGKSGHIGR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD++I  S SG + EL +I+   +R    
Sbjct: 70  KVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGAR 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T    S +A  AD+ L    E E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 130 LISVTGNPDSNLAKLADVHLDAAVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 189

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF   HPGG LG        DVM +G+++P V+   PL  A+  ++ K     AVVD 
Sbjct: 190 EEDFARSHPGGALGRKLLTHVRDVMRTGNAVPEVRENTPLAQALMEITRKGMAMTAVVDP 249

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                G+ T+GD+ R     +D  T+ + DVM +NP V+ E+ L   A+Q++  + I+ L
Sbjct: 250 DGHAIGVFTDGDLRRLLETPRDWKTVPIGDVMHRNPHVVNENQLAVEAVQVMEANRINQL 309

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVDD  +  G +H  DL R  +I
Sbjct: 310 LVVDDDGRLTGALHIHDLTRAKVI 333


>gi|83720870|ref|YP_441048.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|167579780|ref|ZP_02372654.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis TXDOH]
 gi|167617855|ref|ZP_02386486.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis Bt4]
 gi|257140299|ref|ZP_05588561.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|83654695|gb|ABC38758.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia
           thailandensis E264]
          Length = 327

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 196/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEASAVRALADQLDGE----FVAAVGLLLECRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +G  L DA+  ++ KR G  AVVD+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLGATLSDALFQITAKRMGMTAVVDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM +NP+ I  D L   A++L+ +H I+ +
Sbjct: 244 AGRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRNPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDEHGALIGALNMHDLFSKKVI 327


>gi|308051143|ref|YP_003914709.1| KpsF/GutQ family protein [Ferrimonas balearica DSM 9799]
 gi|307633333|gb|ADN77635.1| KpsF/GutQ family protein [Ferrimonas balearica DSM 9799]
          Length = 324

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 124/320 (38%), Positives = 198/320 (61%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   R I  EK  +      L   +   F  A   I A +G+VV+ G+GKSGHIG+K+A+
Sbjct: 9   QWGRRVIEVEKAAI----DGLNRFIDDAFVAACHTILACQGKVVVMGMGKSGHIGNKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF+H  EASHGDLGM++R+D++I +S SG + E+  ++   RR  +P+IA+
Sbjct: 65  TLASTGTPAFFMHPGEASHGDLGMLSREDVVIAISNSGEAGEIMTLMPVIRRLGVPVIAM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  A   L +  + E+CP GLAPT+S    L +GDALA+ LL+++ F+ +DF
Sbjct: 125 TGKPESSLAKVAQHHLCIAVDEEACPLGLAPTSSTTATLVMGDALAVVLLQAKGFTADDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+G+ +PLV     + +A+  +S K  G  AVVD+  ++
Sbjct: 185 ALSHPGGALGRKLLLRVTDLMHAGELLPLVTEQVTVSEALLEISAKGLGMTAVVDDQGRM 244

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R      D++   +  VM +NP  I    L   A++L+ +  I+ L+VVD
Sbjct: 245 SGLFTDGDLRRVLDARVDIHATPIGSVMTRNPVTISGPMLAAEALKLMEERKINGLVVVD 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  +  G ++ +D+L+ G++
Sbjct: 305 EEGRPQGALNTMDMLKAGVL 324


>gi|254510352|ref|ZP_05122419.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium KLH11]
 gi|221534063|gb|EEE37051.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium KLH11]
          Length = 320

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 133/321 (41%), Positives = 197/321 (61%), Gaps = 9/321 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A + I  E R L +L   L       F  AV+ I    GR++++GIGKSGHIG K
Sbjct: 6   SFLNTARQVITDEARALDTLAEGLDER----FAQAVDLILQATGRIIVSGIGKSGHIGHK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IPL
Sbjct: 62  IAATLASTGTPAYFVHPAEASHGDLGMVSKGDVVLAISNSGEAPELVNLLAFTRRFGIPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I ++S+ +S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F  
Sbjct: 122 IGLSSKPESTLMKQADVHLLIPSMGEACGFGMVPSISTTLTLAMGDALAIALMKYRDFKP 181

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGGKLG       D+MH  + +P+V  G P+ +A+ ++S+K FG V V D+  
Sbjct: 182 EDFRAYHPGGKLGAQLSTVRDLMH--EDLPVVPAGTPMSEALLVMSQKSFGVVGVTDDAG 239

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV- 320
            L GIIT+GD+ RN    L   + ++VM +NP  I  + +   A+ ++    I+ L VV 
Sbjct: 240 CLLGIITDGDLRRNMEGLLGKST-QEVMTRNPLTIAPNAMAEEAVAIMNDRKITSLFVVE 298

Query: 321 -DDCQKAIGIVHFLDLLRFGI 340
            +      G++H  D LR G+
Sbjct: 299 PEAQGPVQGLLHIHDCLRVGL 319


>gi|163853013|ref|YP_001641056.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
 gi|240140354|ref|YP_002964833.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
 gi|163664618|gb|ABY31985.1| KpsF/GutQ family protein [Methylobacterium extorquens PA1]
 gi|240010330|gb|ACS41556.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens AM1]
          Length = 340

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 157/315 (49%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+T A
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATFA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEKGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVD-QGR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|227824361|ref|ZP_03989193.1| conserved hypothetical protein [Acidaminococcus sp. D21]
 gi|226904860|gb|EEH90778.1| conserved hypothetical protein [Acidaminococcus sp. D21]
          Length = 330

 Score =  349 bits (897), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 138/328 (42%), Positives = 205/328 (62%), Gaps = 10/328 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++  + A  ++  E   +  L       +   F  A+E I    GR+++TG+GKSG IG
Sbjct: 7   SDTMFERAKEALQIEADSILELI----PRVDEHFGAALEMILHCPGRIIVTGMGKSGIIG 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H AEA HGDLGM+T+ D+I+ +S SG + E+  IL   RR   
Sbjct: 63  RKIAATLASTGTPSFFLHPAEAIHGDLGMVTQGDVILAISNSGETGEVLHILPSIRRIGA 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+  + +S +A +ADIVL +  + E+CP GLAPT+S    LA GDALA+ LL +R+F
Sbjct: 123 RIIAMVGKPESTLAKNADIVLDVGVKKEACPLGLAPTSSTTATLAFGDALAMELLSARHF 182

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +EN F + HPGG LG    +   D+MH GD  PLV     + DA+ ++++K  G V+VVD
Sbjct: 183 TENQFAIYHPGGSLGRKLLLTVGDIMHKGDENPLVPSDMTVKDALFVITDKGLGAVSVVD 242

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN--- 313
              +LKG++T+GDI R F K L++L   V ++M K+PK I    L   A+ L+  +    
Sbjct: 243 GQGRLKGLLTDGDIRRGFAKSLDSLNKPVSELMTKSPKTITARKLAAEALHLMESNKPHP 302

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+VL VVD+ +K +G++H  DL+  G++
Sbjct: 303 ITVLPVVDEEKKVVGLLHMTDLVHQGVV 330


>gi|294668173|ref|ZP_06733280.1| arabinose 5-phosphate isomerase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309881|gb|EFE51124.1| arabinose 5-phosphate isomerase [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 326

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 149/324 (45%), Positives = 209/324 (64%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++ A   +  E  GL  +   L G     F  A + I +  GR+V+ GIGKSGH+G 
Sbjct: 7   EQYIEWAREVLQIEADGLKEISDGLNGT----FAAAADTILSCTGRLVVMGIGKSGHVGH 62

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+ AIL   +R +I 
Sbjct: 63  KIAATLASTGTPAFFVHPAEAAHGDLGMIVDGDVVLAISNSGESDEISAILPALKRKNIC 122

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI IT+  +S +A HADI LT     E+CP GLAPT+S    +A+GDALA+ALL +R+F+
Sbjct: 123 LICITAHPESTMARHADIHLTAVVSQEACPLGLAPTSSTTAVMALGDALAVALLRARSFT 182

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF + HP G+LG  L +  +D+MHSGD+ P V    PL DA+ I+SEK  G +AV D+
Sbjct: 183 REDFALSHPAGRLGKRLLLRVADLMHSGDNSPAVTEDTPLKDAVVIMSEKGLGMLAVTDQ 242

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G +LKGI+T+GD+ R F K      L+V DVM  NPK I  D L T A++ ++Q++++ L
Sbjct: 243 GGRLKGILTDGDLRRLFQKCETFAGLTVNDVMHPNPKSIAPDRLATEALKEMQQNHVNGL 302

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VV+     +G ++  DLL   I+
Sbjct: 303 LVVEGDGILVGALNMHDLLAARIL 326


>gi|332531905|ref|ZP_08407789.1| arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           ANT/505]
 gi|332038532|gb|EGI74975.1| arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           ANT/505]
          Length = 323

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 126/327 (38%), Positives = 209/327 (63%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + ++  LR +  E++ LS +   +       FH A + +   +GR+++ G+GKSGH
Sbjct: 1   MATLNFIEQGLRVLDVERQALSDIAQYV----DENFHNACQLMYDCEGRIIVIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R 
Sbjct: 57  IGNKIAATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T   +S +A  A++ + +  E E+C  GLAPT+S    LA+GDA+A+ALLE+R
Sbjct: 117 GAKMIAMTGNTQSTMATLANVHVCIKVEKEACSLGLAPTSSTTATLAMGDAMAVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG  L +   DVMHSG + P++ +   + DA+  +S K  G  A+
Sbjct: 177 GFTADDFALSHPGGSLGKRLLLTLKDVMHSGANTPIIDVSQTVKDALIEMSAKGLGMTAI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VDE Q+L G+ T+GD+ R   +  D++T  ++ VM K+     +D L   A+ ++ +  I
Sbjct: 237 VDENQQLVGLFTDGDLRRILEQRIDIHTTQIDVVMTKSCTTATQDILAAEALNIMERKRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+VV++  + IG ++  DLL+ G++
Sbjct: 297 NGLIVVNEKNQPIGALNMQDLLKAGVL 323


>gi|15964325|ref|NP_384678.1| putative capsule expression protein [Sinorhizobium meliloti 1021]
 gi|15073502|emb|CAC45144.1| Putative arabinose 5-phosphate isomerase [Sinorhizobium meliloti
           1021]
          Length = 337

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 152/335 (45%), Positives = 217/335 (64%), Gaps = 4/335 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            +  T   H+    + ++   R++     G+ +L   L      +     AVE +    G
Sbjct: 4   VRHATADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGDGDG 61

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT + FVH  EASHGDLGMIT  D +++LSWSG + 
Sbjct: 62  RVVVSGVGKSGHIGRKIAATLASTGTSAHFVHPTEASHGDLGMITAQDALVLLSWSGETA 121

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I S  +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 122 ELANMLTYAKRFKVPIVSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 181

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  
Sbjct: 182 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIE 241

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V + DE  KL G+IT+GD+ R+   DL    V++VM +NP+VI  D L + A
Sbjct: 242 MSAKGFGVVGITDESGKLIGVITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAA 301

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+ ++ H ++VL +VD+    +GI+H  DLLR G+
Sbjct: 302 MEFMQDHKVTVLFLVDEAGAPVGILHIHDLLRAGV 336


>gi|169796522|ref|YP_001714315.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii AYE]
 gi|213156365|ref|YP_002318785.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
 gi|215483985|ref|YP_002326210.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii
           AB307-0294]
 gi|301346199|ref|ZP_07226940.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB056]
 gi|301510178|ref|ZP_07235415.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB058]
 gi|301594398|ref|ZP_07239406.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii AB059]
 gi|332853946|ref|ZP_08435066.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013150]
 gi|332870202|ref|ZP_08439097.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013113]
 gi|169149449|emb|CAM87335.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii AYE]
 gi|213055525|gb|ACJ40427.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii AB0057]
 gi|213987865|gb|ACJ58164.1| Arabinose 5-phosphate isomerase [Acinetobacter baumannii
           AB307-0294]
 gi|332728302|gb|EGJ59683.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013150]
 gi|332732369|gb|EGJ63626.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6013113]
          Length = 325

 Score =  349 bits (896), Expect = 3e-94,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ +  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQAIDVLATQIDDR----FNRACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+G+ +P V    P+   +  +S KR G   +VDE   L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGEELPKVSPDTPMNQVLYEISNKRLGLTTIVDEQDHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L Q  IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|294139190|ref|YP_003555168.1| KpsF/GutQ family carbohydrate isomerase [Shewanella violacea DSS12]
 gi|293325659|dbj|BAJ00390.1| carbohydrate isomerase, KpsF/GutQ family [Shewanella violacea
           DSS12]
          Length = 325

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 131/324 (40%), Positives = 200/324 (61%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q   + I  E++ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NKLRQWGKKVIDVERKALDNLYQYVD---SAEFAAACKLIFECTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++T ASTGTP+FFVH  EASHGDLG+++ DD+I+ +S SG + E+  ++   +R  +P
Sbjct: 62  KISATFASTGTPAFFVHPGEASHGDLGVLSEDDIILAISNSGEASEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T   +S +A HA + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 IIALTGNPESTMAKHAVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF + HPGG LG    +  SDVMH G  +PLV+    + DA+  +S K  G  AV D+
Sbjct: 182 RDDFALSHPGGMLGRKLLLKVSDVMHKGSELPLVRHNICVTDALYEISNKGLGMTAVTDD 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R      +L   S+ DVM K    I E  L   A++++ + +I+ L
Sbjct: 242 DNKLVGIFTDGDLRRVIDAQVNLRETSISDVMSKACTTISEGILAAEALKVMDEKDINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           ++VDD    IG ++ LD+++ G+I
Sbjct: 302 IIVDDNNTPIGALNMLDMVKAGVI 325


>gi|284049013|ref|YP_003399352.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
 gi|283953234|gb|ADB48037.1| KpsF/GutQ family protein [Acidaminococcus fermentans DSM 20731]
          Length = 321

 Score =  349 bits (896), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 198/323 (61%), Gaps = 10/323 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A  ++  E   +  L       +   F  A++ I   +GR+++TG+GKSG IG K+A+
Sbjct: 3   EKAKEALQIEADSILELL----PRIDDHFGEALKMILHCRGRIIVTGMGKSGIIGRKIAA 58

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF+H AE  HGDLGM+T  D+++ LS SG + E+  IL   RR    +IA+
Sbjct: 59  TLASTGTPAFFLHPAEGIHGDLGMVTEHDVVLALSNSGETGEVLNILPSIRRIGARIIAM 118

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
               +S +A +ADIVL +  + E+CP GLAPT+S    LA GDALA+ LL +R+F+  +F
Sbjct: 119 VGNPESTLAKNADIVLNVGVKREACPLGLAPTSSTTAALAFGDALAMELLSARHFTPEEF 178

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   DVMH GD  P+V     + DA+ I+++K  G V+VVDE Q L
Sbjct: 179 AIFHPGGSLGRKLLLTVDDVMHKGDENPVVHADISVKDALFIITDKGVGAVSVVDEDQHL 238

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
           +G++T+GDI R   +DL+     V  +M KNPK I +  L   A+ L+  +    I+VL 
Sbjct: 239 QGLLTDGDIRRGIARDLDCLNRPVSQMMTKNPKTIQDHKLAAEALHLMESNKPRPITVLP 298

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD  +K +G++H  DL+  G++
Sbjct: 299 VVDKDRKVVGLLHITDLVHQGVV 321


>gi|209521313|ref|ZP_03270030.1| KpsF/GutQ family protein [Burkholderia sp. H160]
 gi|209498259|gb|EDZ98397.1| KpsF/GutQ family protein [Burkholderia sp. H160]
          Length = 327

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 192/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L + L G     F  AV+ I + +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRNQLDG----GFVGAVDHILSCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELMAILPLIKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPGSSLAQLADVHLNSGVSKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V     + DA+  L+ KR G  A+VD 
Sbjct: 184 RDDFARSHPGGALGRRLLTYVRDVMRTGDQLPQVTPDATVRDALFQLTSKRMGMTAIVDH 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L +  VM   P+ I  D L   A++L+ ++ I+ +
Sbjct: 244 EGRVTGIFTDGDLRRVLERDGDFRQLPIASVMTAGPRTIGPDHLAVEAVELMERYRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEKGKLIGALNMHDLFSKKVI 327


>gi|218531823|ref|YP_002422639.1| KpsF/GutQ family protein [Methylobacterium chloromethanicum CM4]
 gi|218524126|gb|ACK84711.1| KpsF/GutQ family protein [Methylobacterium chloromethanicum CM4]
          Length = 340

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 159/315 (50%), Positives = 210/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+TLA
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATLA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTPS +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPSLYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEAGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVD-QGR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|110635071|ref|YP_675279.1| KpsF/GutQ family protein [Mesorhizobium sp. BNC1]
 gi|110286055|gb|ABG64114.1| KpsF/GutQ family protein [Chelativorans sp. BNC1]
          Length = 331

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 165/311 (53%), Positives = 217/311 (69%), Gaps = 1/311 (0%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R++  E+  L++L  +L   LS  F  AVE I  I GRV++TG+GKSGHIG+K+A+TLAS
Sbjct: 20  RTLSTEQAALAALAEALDNGLSESFAEAVEMIARISGRVIVTGVGKSGHIGTKIAATLAS 79

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+FFVH  EA+HGDLGMI  DD II LSWSG S ELK I+ YARRFSIPLIA+TS +
Sbjct: 80  TGTPAFFVHPVEANHGDLGMIAPDDAIIALSWSGESAELKGIVAYARRFSIPLIAMTSGS 139

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  + +VL LPK  E+CPHGLAPT+S ++QLA GDALAIALLE+R F+ + F   H
Sbjct: 140 RSALARESSVVLCLPKVQEACPHGLAPTSSTLVQLAAGDALAIALLEARGFTPDHFRTFH 199

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG+LG       D+MH+G+ +PLV  G  + +AI  +S K FGCV + +    L GI+T
Sbjct: 200 PGGQLGAKLTRIGDIMHTGERMPLVSSGTGMREAILEISRKGFGCVGITNGEGALIGIVT 259

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD+ R+   DL  +SV++VM   PK I  DTL   A+Q++    I+ LMVV +  + +G
Sbjct: 260 DGDLRRHMDSDLLAMSVDEVMTHAPKTIKPDTLAAAALQMINSSAITTLMVV-ENGRPVG 318

Query: 329 IVHFLDLLRFG 339
           IVH  DLLR G
Sbjct: 319 IVHLHDLLRIG 329


>gi|292490483|ref|YP_003525922.1| KpsF/GutQ family protein [Nitrosococcus halophilus Nc4]
 gi|291579078|gb|ADE13535.1| KpsF/GutQ family protein [Nitrosococcus halophilus Nc4]
          Length = 338

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 133/342 (38%), Positives = 200/342 (58%), Gaps = 7/342 (2%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              +   S     +  +     Q     I  E   +++L + + G     F  A + + A
Sbjct: 1   MVSNPLNSPLSSYNEDLDKRLAQLGAAVIETEASAVAALRTRING----NFAAACKYMLA 56

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
              R+V+ G+GKSGHIG K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG
Sbjct: 57  CTARIVVLGMGKSGHIGGKIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSG 116

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            ++E+  IL   +R  +PLIA+T + +S +   AD+ + +  E E+CP GLAPT S+   
Sbjct: 117 ETEEICTILPLIKRLGVPLIALTGQPQSTLGKAADVHIDISVEKEACPLGLAPTASSTAT 176

Query: 183 LAIGDALAIALLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALAIALLE+R F+  DF   HP G     L +  SD+MH G++IP V     L +
Sbjct: 177 LAMGDALAIALLEARGFTAEDFARSHPGGRLGRRLLLRISDIMHRGEAIPAVTEDVLLSN 236

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+  ++ K  G  AVVD   ++ GI T+GD+ R   +  D++   +  +M  + K +  +
Sbjct: 237 ALLEMTRKGLGMTAVVDVQNQVVGIFTDGDLRRALDRGIDVHATPIAAIMTTHCKTLGPE 296

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A+Q++++H I+ L+VVD  Q  IG ++  DLLR G++
Sbjct: 297 LLAAEALQMMQRHRINALLVVDHEQHLIGALNMHDLLRAGVL 338


>gi|254562948|ref|YP_003070043.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens DM4]
 gi|254270226|emb|CAX26220.1| Arabinose-5-phosphate isomerase [Methylobacterium extorquens DM4]
          Length = 340

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 157/315 (49%), Positives = 209/315 (66%), Gaps = 3/315 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR+I  E+ GL+ L +++   L   F  AVE+I A +GRV+ TG+GKSGH+  K+A+T A
Sbjct: 26  LRTIETEREGLACLMAAIDNGLGEPFAQAVERIGAARGRVICTGMGKSGHVARKIAATFA 85

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y RR+ + L+AITS 
Sbjct: 86  STGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGYTRRYRVGLVAITSN 145

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GDALA+ALLE+R FS  DF V 
Sbjct: 146 AASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGDALAVALLEARGFSARDFSVF 205

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG       +VMH G  +P+V IG  +  A+  +  K FG V VVDE   L GI+
Sbjct: 206 HPGGRLGASLRQVREVMHGGAHLPVVAIGTAMRAAVAEIDAKGFGSVLVVDEAGALAGIL 265

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R     + L+ L VE VM  NP+ I  +TLL  A+Q+     I+ L+VVD   +
Sbjct: 266 TDGDVRRAVFSREGLDRLPVEAVMTANPRTITPETLLAKALQIQEAMKITALVVVD-QGR 324

Query: 326 AIGIVHFLDLLRFGI 340
            +G+VH+ DLLR G+
Sbjct: 325 PVGLVHYHDLLRTGV 339


>gi|311695328|gb|ADP98201.1| LOW QUALITY PROTEIN: KpsF/GutQ family protein [marine bacterium
           HP15]
          Length = 325

 Score =  349 bits (895), Expect = 4e-94,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 187/324 (57%), Gaps = 8/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     A+R+I  E+  + +LES +      QF  A E I    GRVV+TG+GKSGHIG+
Sbjct: 7   HDFRSSAIRAIRIERDAIDALESRI----DDQFTRACEVIMNCTGRVVVTGMGKSGHIGN 62

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSF     + +    G IT  D++I +S SG++ E+  IL   +R   P
Sbjct: 63  KIAATLASTGTPSFSCIPEKQATATWG-ITPQDVVIAISNSGNTSEVVTILPLIKRMGAP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T    S +A  A   L +    E+CP GLAPT+S    L +GDALA+ALLE+R FS
Sbjct: 122 LISMTGNATSTLAREAVANLDVSVMVEACPLGLAPTSSTTATLVMGDALAVALLEARGFS 181

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG    +  SD+MH+GD IP+V  G PL  A+  +S K  G   VV+ 
Sbjct: 182 AEDFAFSHPGGSLGRRLLLRVSDIMHTGDQIPVVNEGTPLSGALLEISRKGLGMTTVVNG 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L GI T+GD+ R   +  D++   + +VM +N K I  D L   A+ ++ +  I+ L
Sbjct: 242 EGTLTGIFTDGDLRRTLDRSVDIHHTPINEVMTRNGKTIQADHLAAEALNIMEEMKINAL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
            V +D    IG ++  DLLR G+I
Sbjct: 302 PVTNDSGALIGAINMHDLLRAGVI 325


>gi|184157545|ref|YP_001845884.1| sugar phosphate isomerase [Acinetobacter baumannii ACICU]
 gi|239503715|ref|ZP_04663025.1| sugar phosphate isomerase [Acinetobacter baumannii AB900]
 gi|332874279|ref|ZP_08442198.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6014059]
 gi|183209139|gb|ACC56537.1| predicted sugar phosphate isomerase [Acinetobacter baumannii ACICU]
 gi|193076931|gb|ABO11664.2| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii ATCC
           17978]
 gi|322507859|gb|ADX03313.1| kdsD [Acinetobacter baumannii 1656-2]
 gi|323517456|gb|ADX91837.1| sugar phosphate isomerase [Acinetobacter baumannii TCDC-AB0715]
 gi|332737504|gb|EGJ68412.1| arabinose 5-phosphate isomerase [Acinetobacter baumannii 6014059]
          Length = 325

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 137/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ +  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQAIDVLATQIDDR----FNRACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VDE   L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKRLGLTTIVDEQDHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L Q  IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|329847848|ref|ZP_08262876.1| arabinose 5-phosphate isomerase [Asticcacaulis biprosthecum C19]
 gi|328842911|gb|EGF92480.1| arabinose 5-phosphate isomerase [Asticcacaulis biprosthecum C19]
          Length = 328

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 148/321 (46%), Positives = 197/321 (61%), Gaps = 6/321 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           + + +    R +  E   L        G L   F  AVE I A  GRV+++G+GKSGHI 
Sbjct: 13  QTAVLATGARVLRTEGEALLL----FAGSLDENFVRAVELIHACTGRVILSGMGKSGHIA 68

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFFVH AEASHGDLGMIT DD+ IVLS SG + EL  IL + RRF I
Sbjct: 69  RKIAATLASTGTPSFFVHPAEASHGDLGMITPDDICIVLSNSGETSELSDILGHTRRFGI 128

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI + S   S +   AD+ L LP  PE+C  G+APTTS  M LA+GDALA+A++E + F
Sbjct: 129 PLIGVASRPGSTLLTTADVPLLLPNAPEACAIGMAPTTSTTMTLALGDALAVAVMEKKGF 188

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF V HPGGKLG   +  S +MH GD +PL+  G P+ +A+ +++ K FG V V + 
Sbjct: 189 QPTDFKVFHPGGKLGAQLLTVSALMHKGDDLPLIGEGAPMSEALLVMTAKSFGVVGVCN- 247

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           G  L GIIT+GD+ R+    L T    DVM + P+ I    L   A+ ++    I+ L V
Sbjct: 248 GGALTGIITDGDLRRHMD-GLMTKRAADVMHRGPRTIAAGHLAVEALGVMNDRKITCLFV 306

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD+ +  +G++H  D LR G+
Sbjct: 307 VDETKTPVGLIHIHDCLRAGV 327


>gi|319406114|emb|CBI79744.1| sugar isomerase [Bartonella sp. AR 15-3]
          Length = 331

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 175/325 (53%), Positives = 223/325 (68%), Gaps = 1/325 (0%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H+L   + V  AL++I  EKRGL +LE +   +L+  F  AV+ I    G VVITG+GKS
Sbjct: 7   HTLNLQNAVILALKTISIEKRGLEALEKAFHEKLADSFKAAVQAISNANGHVVITGLGKS 66

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+TLASTGTP+FF+HAAEA+HGDLGMI  DD+++ LSWSG + EL  I+ +  
Sbjct: 67  GHIGTKIAATLASTGTPAFFIHAAEANHGDLGMIGSDDVVLALSWSGETTELSGIISHTA 126

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF IPLIAITS   S++   ADIVL LPK  E+CPHGLAPT S  MQL IGDALAIALLE
Sbjct: 127 RFHIPLIAITSGEHSILGRQADIVLLLPKVEEACPHGLAPTASTTMQLVIGDALAIALLE 186

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R F+  DF + HPGG LG       D+MH GD +PLV  G  +  A+ IL +K FGCV 
Sbjct: 187 MRGFTATDFKIYHPGGSLGANLKYVRDIMHQGDRVPLVMQGASMTAAMEILVKKHFGCVG 246

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV+   +L GIIT+GD+ RN H DL+  +V++VM KNPK +  DTL+  A   +  H+I 
Sbjct: 247 VVNSRGELIGIITDGDLARNIHNDLSQFNVDEVMTKNPKTVGPDTLVGTATAFINDHHIG 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              V+ + +K IGIVHF DLLR G+
Sbjct: 307 AFFVI-ENKKPIGIVHFHDLLRIGV 330


>gi|238918528|ref|YP_002932042.1| D-arabinose 5-phosphate isomerase [Edwardsiella ictaluri 93-146]
 gi|238868096|gb|ACR67807.1| arabinose 5-phosphate isomerase [Edwardsiella ictaluri 93-146]
          Length = 328

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 126/320 (39%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A + +   +G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKDVLRIEREGLAHLDLFINQD----FSRACDAMLRCRGKVVVMGMGKSGHIGRKIAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT +FFVH  EASHGDLGM+ + D+++ +S SG S E++A++   +R ++ LI +
Sbjct: 70  TLASTGTSAFFVHPGEASHGDLGMVEQRDVVLAISNSGESQEIQALIPVLKRQNVTLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TNNPDSAMGRAADIHLCIRVPQEACPMGLAPTTSTTATLVMGDALAVALLQARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD +P+V     L DA+  ++ K  G   +      +
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHSGDEVPMVSPTASLRDALLEITRKNLGLTVICGPDAHI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    +LN   + DVM +    I    L   A+ L+++ +I+ L+V +
Sbjct: 250 DGIFTDGDLRRIFDMGINLNNAKIADVMTRGGIRIRPTALAVDALNLMQERHITSLLVAE 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IG+VH  D+LR G++
Sbjct: 310 ND-RLIGVVHMHDMLRAGVV 328


>gi|330818336|ref|YP_004362041.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia gladioli
           BSR3]
 gi|327370729|gb|AEA62085.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia gladioli
           BSR3]
          Length = 327

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 134/324 (41%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----GFVGAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T   +S +A  +D+ L    E E+C   LAPT S    LA+GDALA+ +L++R F 
Sbjct: 124 LIAMTGRPQSSLAQLSDVHLYAGVEKEACSLNLAPTASTTAALALGDALAVVVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            NDF   HPGG LG        DVM +GD +P+V++   L DA+  ++ KR G   V+DE
Sbjct: 184 PNDFARSHPGGSLGRRLLTHVRDVMRTGDEVPIVRLTATLSDALFQITAKRMGMTVVIDE 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM ++P+ I  D L   A++L+ ++ I+ +
Sbjct: 244 QDRVAGIFTDGDLRRVLERDGDFRHLPIADVMTRHPRSIAPDHLAVEAVELMERYRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D     IG ++  DL    +I
Sbjct: 304 LVTDADGVLIGALNMHDLFSKKVI 327


>gi|169633851|ref|YP_001707587.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii SDF]
 gi|169152643|emb|CAP01638.2| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii]
          Length = 325

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ +  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQAIDVLATQIDDR----FNRACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+G+ +P V    P+   +  +S KR G   +VDE   L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGEELPKVSPETPMNQVLYEISNKRLGVTTIVDEQDHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L Q  IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|260557958|ref|ZP_05830170.1| sugar phosphate isomerase [Acinetobacter baumannii ATCC 19606]
 gi|260408468|gb|EEX01774.1| sugar phosphate isomerase [Acinetobacter baumannii ATCC 19606]
          Length = 325

 Score =  348 bits (894), Expect = 6e-94,   Method: Composition-based stats.
 Identities = 137/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ +  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQAIDVLATQIDDR----FNRACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VDE   L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPETPMNQVLYEISNKRLGLTTIVDEQDHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L Q  IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|262369713|ref|ZP_06063041.1| arabinose 5-phosphate isomerase [Acinetobacter johnsonii SH046]
 gi|262315781|gb|EEY96820.1| arabinose 5-phosphate isomerase [Acinetobacter johnsonii SH046]
          Length = 325

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ LS L   +       F  A E I   KGR+VITG+GKSGHIG K+A+
Sbjct: 9   KVALETLEIERQALSVLAKQIDDR----FSRACEIILKCKGRLVITGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+   D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKYLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++++ +  +AD+ LTL    E+CP GLAPT+S    LA+GDALA+ALL++R F+ +DF
Sbjct: 125 SGDDRAPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARGFTSDDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+GD +P V     +   +  +S KR G   +VD+   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTAMNKVLYEISNKRLGLTTIVDDNDHL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   K       L+V DVMIK+P  I  +     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRLIDKQQGFDVNLAVSDVMIKSPLTISPEARAVEALERMNEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  K IG++   DL++ G+
Sbjct: 305 DESNKVIGVLSMHDLIQAGV 324


>gi|220921255|ref|YP_002496556.1| KpsF/GutQ family protein [Methylobacterium nodulans ORS 2060]
 gi|219945861|gb|ACL56253.1| KpsF/GutQ family protein [Methylobacterium nodulans ORS 2060]
          Length = 338

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 154/315 (48%), Positives = 209/315 (66%), Gaps = 1/315 (0%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A+R++  E   L SL  +L GEL   F  AV  I  I GRVV++GIGKSGHI  K+A+T
Sbjct: 24  SAIRTVRTEADALHSLARALDGELRAGFAAAVAAIHNIPGRVVVSGIGKSGHIARKIAAT 83

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ F+H AEASHGDLGMIT  D++I LSWSG + EL  I+ +A+RF++ LIA+T
Sbjct: 84  LASTGTPAAFIHPAEASHGDLGMITPQDIVIALSWSGETAELGDIVSFAKRFAVTLIALT 143

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +  +S +   ADI+L LP   E+CPH LAPT+S++MQLA+GDALAIALLE R FS NDF 
Sbjct: 144 ANPQSTLGLAADILLPLPLVKEACPHNLAPTSSSVMQLALGDALAIALLERRGFSANDFK 203

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           V HPGGKL         +MH GD +PLV  G P+ +A+  +  KRFGC  VVD   +L G
Sbjct: 204 VFHPGGKLAARLKTVGQLMHVGDEMPLVPRGIPMSEALLAIMGKRFGCAGVVDAEGRLVG 263

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +IT GD+ R+   DL    V+ +M  +P  +      + A++L+ +  I+ + VV++  +
Sbjct: 264 MITNGDLRRHMGSDLLHRPVDAIMTTSPITVPPGGFASAALELMNRREITAMFVVEED-R 322

Query: 326 AIGIVHFLDLLRFGI 340
            IGI+H  DLL+ G+
Sbjct: 323 PIGILHIHDLLQVGV 337


>gi|119385335|ref|YP_916391.1| KpsF/GutQ family protein [Paracoccus denitrificans PD1222]
 gi|119375102|gb|ABL70695.1| KpsF/GutQ family protein [Paracoccus denitrificans PD1222]
          Length = 315

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 195/321 (60%), Gaps = 7/321 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  A R I  E  GL+ L   L    S  F  AVE I A +GRVV++G+GKSGH+G 
Sbjct: 2   SAYLDTARRVIRTEAEGLALLADGL----SDSFDRAVETILAARGRVVVSGMGKSGHVGR 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGM+T+ D+ +VLS SG + E+  I+ + RRF IP
Sbjct: 58  KIAATLASTGTPAQFVHPAEASHGDLGMVTQGDVALVLSNSGETPEIADIVAHTRRFQIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI +    +S +   AD+ L LP  PE+C  G+ PTTS  M +A+GDALA+AL+E R F+
Sbjct: 118 LIGVAGRPQSTLLRQADVALVLPAAPEACGTGIVPTTSTTMTMALGDALAVALMEHRQFT 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F   HPGGKLG      +D+MH    +PLV    P+ +A+  +S+K FG   V D  
Sbjct: 178 PEHFRTFHPGGKLGAKLSRVADLMHQ--DMPLVPETAPMAEALLTISQKSFGVTGVTDAR 235

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ R+  + L   S  +VM +NP+ I  D L   A+  ++   I+ L  V
Sbjct: 236 GRLTGIITDGDLRRHM-QGLLDHSAAEVMTRNPRTIGPDQLAEAALAEMQARRITCLFAV 294

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
                  G++H  D LR G++
Sbjct: 295 TPEGTPAGLIHIHDFLRTGLV 315


>gi|126175858|ref|YP_001052007.1| KpsF/GutQ family protein [Shewanella baltica OS155]
 gi|152999230|ref|YP_001364911.1| KpsF/GutQ family protein [Shewanella baltica OS185]
 gi|160873843|ref|YP_001553159.1| KpsF/GutQ family protein [Shewanella baltica OS195]
 gi|217971903|ref|YP_002356654.1| KpsF/GutQ family protein [Shewanella baltica OS223]
 gi|125999063|gb|ABN63138.1| KpsF/GutQ family protein [Shewanella baltica OS155]
 gi|151363848|gb|ABS06848.1| KpsF/GutQ family protein [Shewanella baltica OS185]
 gi|160859365|gb|ABX47899.1| KpsF/GutQ family protein [Shewanella baltica OS195]
 gi|217497038|gb|ACK45231.1| KpsF/GutQ family protein [Shewanella baltica OS223]
 gi|315266070|gb|ADT92923.1| KpsF/GutQ family protein [Shewanella baltica OS678]
          Length = 325

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 130/327 (39%), Positives = 204/327 (62%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K+   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDKSQLRQWGCKVIDIEKSALDNLYQYVD---SAEFAEACELILNCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG++  +D+I+ +S SG S E+  ++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLADNDVILAISNSGESSEILTLMPVIQRM 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +P+IA+T + +S +A  + + L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 GVPVIAVTGKPESNMARLSKVHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG    +   DVMHSGD +PLV     + +A+  +S+K  G  A+
Sbjct: 179 GFTRDDFAMSHPGGALGRKLLLKVCDVMHSGDDLPLVNHDICITEALYEISKKGLGMTAI 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +D+ +KL GI T+GD+ R      +L T  + DVM +N   I +  L   A+Q++   NI
Sbjct: 239 IDDQRKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCVTITDGVLAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D  +  IG ++ LD+++ G+I
Sbjct: 299 NGLIVIDKDRHPIGALNMLDMVKAGVI 325


>gi|187922608|ref|YP_001894250.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
 gi|187713802|gb|ACD15026.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
          Length = 327

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L      +L   F  AV+ I   +GRVV++GIGKSGH+  
Sbjct: 8   DRALALARDVLDIEADAVRALRD----QLDDGFVGAVDFILGCRGRVVVSGIGKSGHVAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPSSSLAQLADVHLNSGVSKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V     + DA+  L+ KR G  A+VD 
Sbjct: 184 RDDFARSHPGGALGRRLLTYVRDVMRTGDQVPKVTPDATVRDALFQLTAKRMGMTAIVDH 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   LS+  VM   P+ I  D L   A++L+ +H I+ +
Sbjct: 244 EDRVAGIFTDGDLRRVLERDGDFRELSIASVMTAGPRTIGPDQLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEAGKLIGALNMHDLFSKKVI 327


>gi|119776215|ref|YP_928955.1| arabinose-5-phosphate isomerase [Shewanella amazonensis SB2B]
 gi|119768715|gb|ABM01286.1| Arabinose-5-phosphate isomerase [Shewanella amazonensis SB2B]
          Length = 325

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 130/327 (39%), Positives = 206/327 (62%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +    Q   + I  EK  L +L   +    S  F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDRKQLRQWGSKVIDIEKAALDNLYQFVD---SDAFADACELILRCTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDIVLAISNSGESSEILTLMPVIKRR 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+I++T + +S +A H+ + L +    E+CP GLAPT+S    L +GDALA+ALL+++
Sbjct: 119 GIPIISMTGKPESTMAKHSLLHLCIKVPEEACPLGLAPTSSTTATLVMGDALAVALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+++DF + HPGG LG    +  SDVMH GD +PLV+    + DA+  +S+K  G  A+
Sbjct: 179 GFTKDDFAMSHPGGALGRKLLLHVSDVMHKGDELPLVQDDICITDALYEISKKGLGMTAI 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V+    L+GI T+GD+ R      +L   S+ DVM +N   I E  L   A++L+ + NI
Sbjct: 239 VNASGALEGIFTDGDLRRVIDAQINLRQTSIADVMTRNCITIGEHILAAEALKLMDEKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D  ++ IG ++ LD+++ G+I
Sbjct: 299 NGLIVIDAERRPIGALNMLDMVKAGVI 325


>gi|269215216|ref|ZP_05987955.2| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
 gi|269208038|gb|EEZ74493.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
          Length = 351

 Score =  348 bits (893), Expect = 7e-94,   Method: Composition-based stats.
 Identities = 137/333 (41%), Positives = 207/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  +++ N   +  A   +  E  GL      +  +L   F  A + +    GRVVITG
Sbjct: 23  QRRIAMVGNGKYLDWAREVLHTEAEGL----REIAADLDENFARAADALLRCTGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGH+G K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHVGRKIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R +I L+ IT+   S +A +ADI +T     E+CP GLAPT+S    +A+GDALA+
Sbjct: 139 PALKRKNITLVCITARPGSTMARYADIHITASVSKEACPLGLAPTSSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +   L  L VE++M   PK I  + L   A+++
Sbjct: 259 LGMLAVTDAQGRLKGVFTDGDLRRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++I+ L+V D     IG ++  DLL   I+
Sbjct: 319 MQANHINGLLVTDADGVLIGALNMHDLLAARIV 351


>gi|315179029|gb|ADT85943.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio furnissii NCTC 11218]
          Length = 324

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 189/319 (59%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-AIKGRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  L+     +    F  A E I     G+VV+ GIGKSGHIG K+A+T
Sbjct: 11  AQQVLATEIEALQQLDQYFNDD----FCRACEMILANNSGKVVVMGIGKSGHIGRKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI   D+++ +S SG S E+ A+    +R +  +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIESGDIVLAISNSGESSEILALFPVLKRLNNRIISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 127 GNPHSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +   D+MHSG+ +P V     + DA+  +S+K  G  AVV E   L 
Sbjct: 187 LSHPGGALGRKLLMKLHDIMHSGEELPKVSPDALVRDALLEISQKGLGMTAVVAEDDHLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T S+ DVM  NP V   + L    + L+++  I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHTASIRDVMTCNPTVASPNILAVEGLNLMQEKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 DGKLVGALNMHDLLKAGVM 324


>gi|307315781|ref|ZP_07595296.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306898573|gb|EFN29245.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 337

 Score =  348 bits (893), Expect = 8e-94,   Method: Composition-based stats.
 Identities = 149/338 (44%), Positives = 217/338 (64%), Gaps = 4/338 (1%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKA 62
            +  +  T   H+    + ++   R++     G+ +L   L      +     AVE +  
Sbjct: 1   MNALRHATADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQAFAGALVDAVELMGD 58

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
             GRVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG
Sbjct: 59  GDGRVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSG 118

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  +L YA+RF +P+++I S  +S +A +++I L LPK PE+CPHGLAPTTSA++Q
Sbjct: 119 ETAELANMLTYAKRFKVPVVSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQ 178

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A
Sbjct: 179 LAVGDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEA 238

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +  +S + FG V + DE  KL G+IT+GD+ R+   DL     ++VM +NP+VI  D L 
Sbjct: 239 VIEMSARGFGVVGITDESGKLVGVITDGDLRRHMAGDLLAQPAQEVMSRNPRVIKGDVLA 298

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + AM+ ++ H ++VL +VD+    +GI+H  DLL  G+
Sbjct: 299 SAAMEFMQDHQVTVLFLVDEAGAPVGILHIHDLLHAGV 336


>gi|238028652|ref|YP_002912883.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia glumae
           BGR1]
 gi|237877846|gb|ACR30179.1| Sugar isomerase, KpsF/GutQ family protein [Burkholderia glumae
           BGR1]
          Length = 327

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 134/324 (41%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALREQLDGD----FVGAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S SG S EL +IL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIAISNSGESAELVSILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T   +S +A  +D+ L    E E+C   LAPT S    LA+GDALA+ +L++R F 
Sbjct: 124 LIAMTGRPQSSLAQLSDVHLNAAVEKEACSLNLAPTASTTAALALGDALAVVVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD IP V +   L DA+  ++ KR G  AVVDE
Sbjct: 184 PDDFARSHPGGALGRRLLTYVRDVMRTGDEIPTVTLAATLSDALFQITAKRMGMTAVVDE 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + +VM ++P+ I  D L   A++L+ ++ I+ +
Sbjct: 244 HNRVAGIFTDGDLRRVLERDGDFRRLPIGNVMTRHPRTIAPDHLAVEAVELMERYRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D     IG ++  DL    +I
Sbjct: 304 LVTDPDGTLIGALNMHDLFSQKVI 327


>gi|163749273|ref|ZP_02156522.1| carbohydrate isomerase, KpsF/GutQ family protein [Shewanella
           benthica KT99]
 gi|161330992|gb|EDQ01918.1| carbohydrate isomerase, KpsF/GutQ family protein [Shewanella
           benthica KT99]
          Length = 325

 Score =  348 bits (893), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 134/324 (41%), Positives = 204/324 (62%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q     I  E++ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NKLRQWGKNVIDIERKALDNLYQYVD---SAEFAAACKLIFECTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++T ASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+  ++   +R  +P
Sbjct: 62  KISATFASTGTPAFFVHPGEASHGDLGVLSENDIILAISNSGESSEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+TS+ KS +A HA++ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 IIAVTSKPKSTMAKHANVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++DF + HPGG LG    +  SDVMH G  +PLVK    + DA+  +S K  G  AV D 
Sbjct: 182 KDDFALSHPGGTLGRKLLLKVSDVMHKGPDLPLVKQNICVTDALYEISNKGLGMTAVTDG 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R      +L   S+ DVM K    I E+ L   A++++ +++I+ L
Sbjct: 242 ANKLVGIFTDGDLRRVIDTQVNLRETSISDVMSKACITISEEILAAEALKVMDENDINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           ++VDD    IG ++ LD+++ G+I
Sbjct: 302 IIVDDNNTPIGALNMLDMVKAGVI 325


>gi|300724967|ref|YP_003714292.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           nematophila ATCC 19061]
 gi|297631509|emb|CBJ92216.1| putative isomerase with phosphosugar-binding domain [Xenorhabdus
           nematophila ATCC 19061]
          Length = 322

 Score =  348 bits (892), Expect = 9e-94,   Method: Composition-based stats.
 Identities = 132/327 (40%), Positives = 199/327 (60%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K    Q   + +  E  GL+SLE  +  +    F  A E +   +G+V++ G+GKSGH
Sbjct: 1   MPKIDFQQAGKKVLHIELDGLTSLEQYINDD----FSQACELMFGCEGKVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFFVH  EASHGDLGM+T  DL++ +S SG S+E+ A++   +R 
Sbjct: 57  IGRKIAATFASTGTPSFFVHPGEASHGDLGMVTPKDLVLAISNSGESNEILALISVLKRQ 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLI +T+ + S +   ADI L +    E+CP GLAPTTS    L +GDALAIALL++R
Sbjct: 117 KVPLICMTNNDNSSMGKAADIHLCIKTPQEACPLGLAPTTSTTATLVMGDALAIALLQAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    + ASD+M +GD IP V     L +A+  ++ K+ G   +
Sbjct: 177 GFTAEDFALSHPGGALGRKLLLLASDLMATGDDIPRVSRTATLREALVEITRKKLGMTVI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            ++  +++GI T+GD+ R F    DLN   + DVM      I  ++L   A+ L++  +I
Sbjct: 237 CNDNMQIQGIFTDGDLRRIFDMGIDLNNAKIADVMTAGGIRIKPNSLAVDALNLMQSRHI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V  +    +G++H  DLL+ G++
Sbjct: 297 TSLLVT-EGDTLLGVLHMHDLLQAGVV 322


>gi|53718177|ref|YP_107163.1| hypothetical protein BPSL0538 [Burkholderia pseudomallei K96243]
 gi|53724070|ref|YP_104589.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei ATCC 23344]
 gi|76808851|ref|YP_332183.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           pseudomallei 1710b]
 gi|121598391|ref|YP_991423.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei SAVP1]
 gi|124386329|ref|YP_001027501.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei NCTC 10229]
 gi|126449441|ref|YP_001082467.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           mallei NCTC 10247]
 gi|167001029|ref|ZP_02266830.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           PRL-20]
 gi|167718035|ref|ZP_02401271.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei DM98]
 gi|167737050|ref|ZP_02409824.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 14]
 gi|167814159|ref|ZP_02445839.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 91]
 gi|167892766|ref|ZP_02480168.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 7894]
 gi|167901261|ref|ZP_02488466.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei NCTC 13177]
 gi|167909478|ref|ZP_02496569.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 112]
 gi|167917507|ref|ZP_02504598.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei BCC215]
 gi|237810788|ref|YP_002895239.1| arabinose 5-phosphate isomerase [Burkholderia pseudomallei MSHR346]
 gi|238561322|ref|ZP_04609537.1| arabinose 5-phosphate isomerase [Burkholderia mallei GB8 horse 4]
 gi|254175015|ref|ZP_04881676.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           10399]
 gi|254181850|ref|ZP_04888447.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|254196848|ref|ZP_04903272.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|254201677|ref|ZP_04908041.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei FMH]
 gi|254207009|ref|ZP_04913360.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei JHU]
 gi|254259097|ref|ZP_04950151.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
 gi|254357488|ref|ZP_04973762.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           2002721280]
 gi|52208591|emb|CAH34527.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52427493|gb|AAU48086.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           23344]
 gi|76578304|gb|ABA47779.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           1710b]
 gi|121227201|gb|ABM49719.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           SAVP1]
 gi|124294349|gb|ABN03618.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei NCTC
           10229]
 gi|126242311|gb|ABO05404.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei NCTC
           10247]
 gi|147747571|gb|EDK54647.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei FMH]
 gi|147752551|gb|EDK59617.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei JHU]
 gi|148026552|gb|EDK84637.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           2002721280]
 gi|160696060|gb|EDP86030.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei ATCC
           10399]
 gi|169653591|gb|EDS86284.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|184212388|gb|EDU09431.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|237506396|gb|ACQ98714.1| arabinose 5-phosphate isomerase [Burkholderia pseudomallei MSHR346]
 gi|238524774|gb|EEP88205.1| arabinose 5-phosphate isomerase [Burkholderia mallei GB8 horse 4]
 gi|243063100|gb|EES45286.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia mallei
           PRL-20]
 gi|254217786|gb|EET07170.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
          Length = 327

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AV+D+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 ANRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDERGALIGALNMHDLFSKKVI 327


>gi|127514234|ref|YP_001095431.1| KpsF/GutQ family protein [Shewanella loihica PV-4]
 gi|126639529|gb|ABO25172.1| KpsF/GutQ family protein [Shewanella loihica PV-4]
          Length = 325

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 125/324 (38%), Positives = 201/324 (62%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   Q   + I  E+  L +L   +    S +F  A + I A  G+V++ G+GKSGHIG+
Sbjct: 5   DQLRQWGRKVIDTERNALDNLYQYVD---SSEFAKACQLILACTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG + E+  ++   +R  +P
Sbjct: 62  KISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGEASEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T + +S +A H+ + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 VIAVTGKPESNMAKHSVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++DF + HPGG LG    +  SDVMH GD +PLV     + +A+  +S+K  G   VV+ 
Sbjct: 182 KDDFALSHPGGSLGRKLLLKVSDVMHKGDDLPLVAEDICITEALYEISKKGLGMTGVVNS 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L GI T+GD+ R      +L   S+ +VM      + E  L   A++++ +  I+ L
Sbjct: 242 QGMLVGIFTDGDLRRVIDAEINLRKTSISEVMTHGCVTVSEGILAAQALKVMDEKEINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D+ QK IG ++ LD+++ G+I
Sbjct: 302 IVTDEQQKPIGALNMLDMVKAGVI 325


>gi|126452770|ref|YP_001064884.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 1106a]
 gi|167822682|ref|ZP_02454153.1| sugar isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei 9]
 gi|167844256|ref|ZP_02469764.1| sugar isomerase, KpsF/GutQ family protein [Burkholderia
           pseudomallei B7210]
 gi|217420160|ref|ZP_03451666.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|226199527|ref|ZP_03795084.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|242314658|ref|ZP_04813674.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
 gi|254187783|ref|ZP_04894295.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254296099|ref|ZP_04963556.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|126226412|gb|ABN89952.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106a]
 gi|157806023|gb|EDO83193.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|157935463|gb|EDO91133.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|217397464|gb|EEC37480.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|225928408|gb|EEH24438.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|242137897|gb|EES24299.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
          Length = 327

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLAMLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AV+D+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 ANRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDERGALIGALNMHDLFSKKVI 327


>gi|302877520|ref|YP_003846084.1| KpsF/GutQ family protein [Gallionella capsiferriformans ES-2]
 gi|302580309|gb|ADL54320.1| KpsF/GutQ family protein [Gallionella capsiferriformans ES-2]
          Length = 328

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/323 (40%), Positives = 193/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q   + +  E   + +L   L       F  A++ I   +GRV+++G+GKSGHI  K
Sbjct: 10  RALQLGRQVLDIEAAAVLALSQRL----DDHFLQALDVILRCEGRVIVSGMGKSGHIARK 65

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T++STGTP++FVH  EASHGDLGM+   D+ I LS+SG S EL  I+   +R    L
Sbjct: 66  IAATMSSTGTPAYFVHPGEASHGDLGMVAGSDVFIALSYSGESQELMTIVPIIKRQGAKL 125

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A  AD+ L    + E+CP GLAPT S    LA+GDALA+ALL+++ FS 
Sbjct: 126 ISMTGNPASSLARVADVHLNAAVDKEACPMGLAPTASTTASLALGDALAVALLDAKGFSA 185

Query: 202 NDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F   HPGG LG   +    DVM SG  +PLV+ G  L +A+  +S K  G  A+VD  
Sbjct: 186 ENFARSHPGGSLGRRLLTLVRDVMRSGSRMPLVQEGAMLSEALLEMSRKGVGMTAIVDAH 245

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             + GI T+GD+ R   K  D ++  V+ VM  +P+ I E++L   A+QL+ Q+NIS ++
Sbjct: 246 GGVLGIFTDGDLRRTLEKKLDFSSTPVKSVMSAHPRCIGEESLAVEAVQLMEQYNISQML 305

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VV+   + +G ++  DLL   +I
Sbjct: 306 VVNTQHQLVGALNMHDLLHAKVI 328


>gi|269960370|ref|ZP_06174744.1| Arabinose 5-phosphate isomerase [Vibrio harveyi 1DA3]
 gi|269834981|gb|EEZ89066.1| Arabinose 5-phosphate isomerase [Vibrio harveyi 1DA3]
          Length = 323

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 130/319 (40%), Positives = 197/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L+         QF  A E I +  G+VV+ G+GKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVTALQQLDQY----FDAQFEQACELILSNNGKVVVMGMGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLSDLHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ DVM KNP     + L    + L++  NI+ L++ D+
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGDVMTKNPTTAHPEMLAVEGLNLMQDKNINALILCDN 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 -NKIVGALNMHDLLKAGVM 323


>gi|255066046|ref|ZP_05317901.1| arabinose 5-phosphate isomerase [Neisseria sicca ATCC 29256]
 gi|255049591|gb|EET45055.1| arabinose 5-phosphate isomerase [Neisseria sicca ATCC 29256]
          Length = 324

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 207/323 (64%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  EL  QF  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   QYLDWAREVLHTEAEGL----REIAAELDEQFVRAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 62  IAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 ICITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH  D++P V++G PL +AI  +SEK  G +AV DE 
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKDDALPAVRLGTPLKEAIVSMSEKGLGMLAVTDEQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +    + L+V+++M  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQQRDRFDGLTVDEIMHPSPKTIPAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D      G ++  DLL   I+
Sbjct: 302 VTDADGVLTGALNMHDLLMARIV 324


>gi|319411113|emb|CBY91517.1| K06041 arabinose-5-phosphate isomerase [Neisseria meningitidis WUE
           2594]
          Length = 351

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++  N   +  A   +  E  GL      +  +L   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAGNEKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+
Sbjct: 139 PALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D     IG ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLIGALNMHDLLAARIV 351


>gi|307728398|ref|YP_003905622.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1003]
 gi|307582933|gb|ADN56331.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1003]
          Length = 344

 Score =  348 bits (892), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 141/334 (42%), Positives = 197/334 (58%), Gaps = 7/334 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
            +R    +  +  +  A   +  E   + +L   L G     F  AV+ I   +GRVV++
Sbjct: 15  TSRMIAKINGDRALALARDVLDIEADAVRALRDQLDG----AFVGAVDFILGCRGRVVVS 70

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSGH+  KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AI
Sbjct: 71  GIGKSGHVARKLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELVAI 130

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R    LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA
Sbjct: 131 LPLIKRLGAKLIAMTGRPSSSLAKLADVHLNSGVAKEACPMNLAPTASTTAALALGDALA 190

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +A+L++R F  +DF   HPGG LG   +   SDVM +GD +P V     + DA+  L+ K
Sbjct: 191 VAVLDARGFGRDDFARSHPGGALGRRLLTYVSDVMRTGDQVPKVMPEATVRDALFQLTAK 250

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           R G  A+VD   ++KGI T+GD+ R   +  D   LS+  VM  +P+ I  D L   A++
Sbjct: 251 RMGMTAIVDSEDRVKGIFTDGDLRRVLERDGDFRALSIAAVMTADPRTIGPDHLAVEAVE 310

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L+ +H I+ ++VVD+  K IG ++  DL    +I
Sbjct: 311 LMERHRINQMLVVDEAGKLIGALNMHDLFSKKVI 344


>gi|319425060|gb|ADV53134.1| arabinose-5-phosphate isomerase, KdsF [Shewanella putrefaciens 200]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 134/327 (40%), Positives = 203/327 (62%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGSKVIDIEKLALDNLYQYVD---SIEFVQACELILNCSGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T +  S +A  A I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPDSTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +   DVMHSG+ +PLV     + +A+  +S+K  G  AV
Sbjct: 179 GFTREDFAMSHPGGALGRKLLLRVRDVMHSGNELPLVNHDICITEALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + DVM +N   I +  L   A+Q++   NI
Sbjct: 239 IDEQHKLVGIFTDGDLRRVIDAEVNLRTTPIADVMTRNCITITDSALAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V++     IG ++ LDL++ G+I
Sbjct: 299 NGLIVINKDHHPIGALNMLDLVKAGVI 325


>gi|260549525|ref|ZP_05823743.1| sugar phosphate isomerase [Acinetobacter sp. RUH2624]
 gi|260407318|gb|EEX00793.1| sugar phosphate isomerase [Acinetobacter sp. RUH2624]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ +  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQAIDVLATQIDDR----FNRACEVLLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +P+I I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPMITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VDE   L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPETPMNQVLYEISNKRLGLTTIVDEQDHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L Q  IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNQKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|295690283|ref|YP_003593976.1| KpsF/GutQ family protein [Caulobacter segnis ATCC 21756]
 gi|295432186|gb|ADG11358.1| KpsF/GutQ family protein [Caulobacter segnis ATCC 21756]
          Length = 318

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 146/320 (45%), Positives = 201/320 (62%), Gaps = 6/320 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +    R +  E   L +L  SL       F  AVE +   KGR+V TGIGKSGH+  K
Sbjct: 5   DAIAVGRRVLSVEADALRTLSQSL----DEAFVKAVETLFNAKGRIVCTGIGKSGHVARK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTG  + FVH AEASHGDLGMI  DD+I+ LS SG + EL   + YA+RFSIPL
Sbjct: 61  IAATLASTGAQAMFVHPAEASHGDLGMIGPDDVILALSKSGEARELSDTIAYAKRFSIPL 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+   S +    DIVL LP  PE+     APTTS  +Q+A+GDA+A+ALLE R F+ 
Sbjct: 121 IAMTAVQDSQLGRGGDIVLRLPDSPEATAEVNAPTTSTTLQIALGDAIAVALLERRGFTA 180

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +    +D+MH  + +PL+    P+ DA+ ++SEKRFG V VVD   
Sbjct: 181 SDFRVFHPGGKLGAMLRTVADLMHGDEELPLIGADAPMSDALLVMSEKRFGAVGVVDGSG 240

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L G+IT+GD+ R+    L   +  +VM + P VI    L   A++++    I+VL VV 
Sbjct: 241 RLAGLITDGDLRRHMD-GLLQHTAGEVMTRAPLVIAPGALAAEALKVMNDRRITVLFVV- 298

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + ++ +G++H  DLLR G+I
Sbjct: 299 EAERPVGVLHVHDLLRAGVI 318


>gi|254671979|emb|CBA04427.1| putative isomerase [Neisseria meningitidis alpha275]
          Length = 351

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 209/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   +  E  GL      +  +L   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAENGKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+
Sbjct: 139 PALKRKDITLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++  PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D     IG ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLIGALNMHDLLAARIV 351


>gi|239787679|emb|CAX84187.1| Sugar phosphate Isomerase [uncultured bacterium]
          Length = 325

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 142/329 (43%), Positives = 206/329 (62%), Gaps = 5/329 (1%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
             +     + + ++ A R +  E   L SL   L       F  A++ + A++GRVV++G
Sbjct: 1   MTQARPSTEAADLESARRVLALEAEALQSLALGLDQ----AFVRALDLLGAVEGRVVVSG 56

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGH+G K+A++LASTGTP+ FVH AEASHGDLGMIT  D ++ LS SG + EL  ++
Sbjct: 57  MGKSGHVGRKIAASLASTGTPAVFVHPAEASHGDLGMITPKDAVLALSNSGETAELSDLI 116

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
            Y RRF+IPL+ ITS   S ++  AD+ L LP + E+CP GLAPTTS  M L +GDALA+
Sbjct: 117 AYTRRFAIPLVGITSRANSTLSEAADVALVLPLKTEACPMGLAPTTSTTMMLGLGDALAV 176

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
            LLE R F+  DF +LHPGG LG   +  +D+MH GD +PLV    P+ + + +++ KRF
Sbjct: 177 TLLERRGFTAADFQMLHPGGSLGRRLLKVADLMHGGDEVPLVAPAQPMAETLLVMTNKRF 236

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           GC  VV    +L GI+T+GD+ R+    +   + ++VM  +PK +    L   A++++  
Sbjct: 237 GCAGVVGPDGRLMGIVTDGDLRRHMADSMLARTAKEVMTLSPKTVRPQMLAAEALRIMNT 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             I+ L VVDD  K +GI+H  D LR G+
Sbjct: 297 SAITTLFVVDD-GKPVGILHIHDCLRAGV 324


>gi|119469170|ref|ZP_01612154.1| D-arabinose 5-phosphate isomerase [Alteromonadales bacterium TW-7]
 gi|119447422|gb|EAW28690.1| D-arabinose 5-phosphate isomerase [Alteromonadales bacterium TW-7]
          Length = 323

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 125/327 (38%), Positives = 204/327 (62%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + ++  LR +  E++ LS +   +       FH A + I   +GR ++ G+GKSGH
Sbjct: 1   MATLNFIEQGLRVLDIERQALSDIAQYV----DENFHQACQLIYDCQGRTIVIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R 
Sbjct: 57  IGNKIAATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  A++ + +  + E+C  GLAPT S    LA+GDA+A+ALLE+R
Sbjct: 117 GAKMIAMTGNASSTMATLANVHICIKVQKEACSLGLAPTASTTATLAMGDAMAVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG  L +   DVMHSG + P++ +   + DA+  +S K  G  A+
Sbjct: 177 GFTADDFALSHPGGSLGKRLLLTLKDVMHSGKNTPIINVTQTIKDALIEMSAKGLGMTAI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD  Q+L G+ T+GD+ R   +  D++T  ++ VM K+     +D L   A+ ++ Q  I
Sbjct: 237 VDSQQQLVGLFTDGDLRRILEQRIDIHTTQIDVVMTKSCTTATQDILAAEALNIMEQKRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L++V++    IG ++  DLL+ G++
Sbjct: 297 NGLIIVNEQNHPIGALNMQDLLKAGVL 323


>gi|221134717|ref|ZP_03561020.1| arabinose 5-phosphate isomerase [Glaciecola sp. HTCC2999]
          Length = 322

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 135/326 (41%), Positives = 202/326 (61%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  S +  A R I  E  G+++L   L       F  A E++   KG+VV++G+GKSGHI
Sbjct: 1   MSTSFISSAKRVIDTEMAGIATLHDCLND----NFVEACERLLNCKGKVVVSGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTP+FF+H  EA+HGDLGM++ DD++I +S SG +DEL  +L   +R  
Sbjct: 57  GNKIAATLASTGTPAFFMHPGEANHGDLGMLSPDDVVIGISNSGETDELLGLLPVLKRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I LIAIT   +S +A HADIV+T+    E+C  GLAPTTS  + L +GDALA+ALL+++ 
Sbjct: 117 ITLIAITQNMQSTLAKHADIVVTIKVPAEACSLGLAPTTSTTVTLVLGDALAVALLDAKG 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HPGG LG    +  +D+M +G+ IP V     +  A+  ++ K  G   V+
Sbjct: 177 FTSEDFALSHPGGSLGRKLLLTCADIMRTGNDIPSVPANTQVPVALYEITSKGLGMTGVI 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E   L GI T+GD+ R      D++ L+ EDVM  N   +  D L   A+ L+++ +I+
Sbjct: 237 HEDGTLIGIFTDGDLRRVLDHKLDIHALTAEDVMTPNCLTVSADMLAVDALNLMQEQHIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VV++  + IG  +   LL+ G++
Sbjct: 297 ALLVVNNTHQIIGAFNMHMLLQAGVV 322


>gi|163867471|ref|YP_001608670.1| sugar isomerase [Bartonella tribocorum CIP 105476]
 gi|161017117|emb|CAK00675.1| sugar isomerase [Bartonella tribocorum CIP 105476]
          Length = 330

 Score =  347 bits (891), Expect = 1e-93,   Method: Composition-based stats.
 Identities = 179/329 (54%), Positives = 233/329 (70%), Gaps = 1/329 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T     +     V  AL+++ +EK+GL +LE++L G LS  F  AV+ I+  +G VVIT
Sbjct: 1   MTIPFSHMALQGAVASALKTLASEKQGLEALEAALLGSLSSSFEAAVQTIRNARGHVVIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I
Sbjct: 61  GLGKSGHIGTKIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETQELSGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + YA RF IPLIAITS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA
Sbjct: 121 MSYAARFRIPLIAITSSEHSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ++LLE R F+  DF + HPGG LG       D+MH GD IPLV  G  + +A+ +L EK 
Sbjct: 181 VSLLEMRGFTATDFKIYHPGGSLGASLKYVCDIMHEGDCIPLVMQGTAMTEAMNVLVEKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+++  +L GI+T+GD+ RN H +L+  +V++VM K PKV+  +TL+  AM  + 
Sbjct: 241 FGCVGVINQKGELIGIVTDGDLARNIHFNLSKFNVDEVMTKAPKVVKPNTLVGAAMAFIN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            H+I    VV + +K IGIVHF DLLR G
Sbjct: 301 DHHIGAFFVV-EDKKPIGIVHFHDLLRIG 328


>gi|91225582|ref|ZP_01260656.1| putative polysialic acid capsule expression protein [Vibrio
           alginolyticus 12G01]
 gi|269968001|ref|ZP_06182039.1| Arabinose 5-phosphate isomerase [Vibrio alginolyticus 40B]
 gi|91189702|gb|EAS75976.1| putative polysialic acid capsule expression protein [Vibrio
           alginolyticus 12G01]
 gi|269827358|gb|EEZ81654.1| Arabinose 5-phosphate isomerase [Vibrio alginolyticus 40B]
          Length = 323

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 128/319 (40%), Positives = 195/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L          QF  A E I +  G+VV+ GIGKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVAALQEL----DTYFDDQFEKACELILSNNGKVVVMGIGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D+++ +S SG S+E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISPGDIVLAISNSGESNEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLSDLHLQITVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGEALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ +VM  NP     D L    + L++  NI+ L++   
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGEVMTTNPTTAHPDMLAVEGLNLMQNKNINALILC-K 304

Query: 323 CQKAIGIVHFLDLLRFGII 341
            +K +G ++  DLL+ G++
Sbjct: 305 DEKIVGALNMHDLLKAGVM 323


>gi|134279895|ref|ZP_01766607.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           305]
 gi|134249095|gb|EBA49177.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           305]
          Length = 327

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLAMLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AV+D+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 ANRVAGIFTDGDLRRVLGRDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDERGALIGALNMHDLFSKKVI 327


>gi|319408151|emb|CBI81804.1| sugar isomerase [Bartonella schoenbuchensis R1]
          Length = 331

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 176/331 (53%), Positives = 232/331 (70%), Gaps = 1/331 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +    + L     +  AL++I  EK+GL +LE +L   LS  F  AV+ I   +G VVIT
Sbjct: 2   MIGSSNMLALQGAITSALKTISREKQGLEALEKALSSYLSDSFKKAVQTISNAQGHVVIT 61

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI+ DD+I+ LSWSG + EL  I
Sbjct: 62  GLGKSGHIGTKIAATLASTGTPAFFVHAAEANHGDLGMISSDDVILALSWSGETMELSGI 121

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + +A RF IPLIA+TS   SV+   ADIVL LPK  E+CPHGLAPTTS +MQLA+GDALA
Sbjct: 122 INHAARFRIPLIAMTSGEHSVLGRKADIVLLLPKVEEACPHGLAPTTSTVMQLAMGDALA 181

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE  +FS  DF + HPGG LG  F    D+MH GDS+PL+  G P+ +A+ IL EK 
Sbjct: 182 VALLERHDFSATDFKIYHPGGSLGANFKYVRDIMHQGDSLPLIIQGAPMTEAVNILVEKH 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV V+++  +L GI+T+GD+ RN H DL+  +V++VM K+PK +  DTL+  A   + 
Sbjct: 242 FGCVGVINQTGELIGIVTDGDLARNIHCDLSKFNVDEVMTKDPKNVTPDTLVGAATAFIN 301

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            H I    V+ + +K +GIVHF DLLR G +
Sbjct: 302 DHQIGAFFVI-EDKKPVGIVHFHDLLRIGAV 331


>gi|282599969|ref|ZP_05972542.2| arabinose 5-phosphate isomerase [Providencia rustigianii DSM 4541]
 gi|282567038|gb|EFB72573.1| arabinose 5-phosphate isomerase [Providencia rustigianii DSM 4541]
          Length = 326

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 131/328 (39%), Positives = 197/328 (60%), Gaps = 9/328 (2%)

Query: 18  LMKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
            M N   Q      +  E+ GL +LE  +  +    F  A +KI + +G+VV+ G+GKSG
Sbjct: 4   EMSNIDFQKVGKEVLHIEREGLKNLEQYINHD----FDLACQKIFSCQGKVVVMGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG+K+A+TLASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG S E+ A+L   +R
Sbjct: 60  HIGTKIAATLASTGTPSFFVHPGEASHGDLGMVTDKDIVLAISNSGESGEILALLPVLKR 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +PLI +T+  +S +  +ADI L +    E+CP GLAPTTS    L +GDALAIALL +
Sbjct: 120 IKVPLICMTNNPESSMGKYADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAIALLTA 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+ +DF + HPGG LG    +   D+M +GD IP +     L +A+  ++ K+ G   
Sbjct: 180 RGFTADDFALSHPGGALGRKLLLLVRDLMSTGDDIPHISKSASLREALIEITRKKLGMTV 239

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +  +   ++GI T+GD+ R F    DLN   + D+M      +    L   A+ L++  +
Sbjct: 240 ICGDDMNIEGIFTDGDLRRIFDMGIDLNNAKIADLMTPGGIRVAPGMLAVEALNLMQSRH 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ L+V D   K +G++H  DLL+ G++
Sbjct: 300 VTSLLVAD-GNKLVGVLHMHDLLQAGVV 326


>gi|157373870|ref|YP_001472470.1| arabinose-5-phosphate isomerase [Shewanella sediminis HAW-EB3]
 gi|157316244|gb|ABV35342.1| Arabinose-5-phosphate isomerase [Shewanella sediminis HAW-EB3]
          Length = 325

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 125/327 (38%), Positives = 202/327 (61%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +    Q     I  E+  L +L   +    S +F  A   I    G+V++ G+GKSGH
Sbjct: 2   VDETQLRQWGRNVIDIERNALDNLYQYVD---SAEFATACRLILECTGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG + E+  ++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSENDIILAISNSGEASEILTLMPVIKRM 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +P+IA+T + +S +A  + + L +    E+CP GLAPT+S    L +GDALA+ALL++R
Sbjct: 119 GLPIIAVTGKPESNMAKLSIVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQAR 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+++DF + HPGG LG    +  SDVMH    +PLV     + DA+  +S+K  G  AV
Sbjct: 179 GFTKDDFALSHPGGSLGRKLLLKVSDVMHKASELPLVSHNICITDALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD+  KL GI T+GD+ R      +L   S+ D M +    + +D L   A++++ + +I
Sbjct: 239 VDDDNKLVGIFTDGDLRRVIDAEVNLRKTSISDAMSRGCVTVSDDILAAEALKVMEEKDI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V+D+ Q+ IG ++ LD+++ G+I
Sbjct: 299 NGLIVIDEQQQPIGALNMLDMVKAGVI 325


>gi|167835393|ref|ZP_02462276.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis MSMB43]
          Length = 327

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRALAGQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ I +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFIAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +G  L DA+  ++ KR G  AVVD+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLGATLSDALFQITAKRMGMTAVVDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM  +P+ I  D L   A++L+ +H I+ +
Sbjct: 244 AGRVAGIFTDGDLRRVLERDGDFRRLPIIDVMTHDPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDEHGALIGALNMHDLFSKKVI 327


>gi|16126502|ref|NP_421066.1| sugar isomerase, KpsF/GutQ [Caulobacter crescentus CB15]
 gi|221235282|ref|YP_002517719.1| arabinose-5-phosphate isomerase [Caulobacter crescentus NA1000]
 gi|13423774|gb|AAK24234.1| sugar isomerase, KpsF/GutQ [Caulobacter crescentus CB15]
 gi|220964455|gb|ACL95811.1| arabinose-5-phosphate isomerase [Caulobacter crescentus NA1000]
          Length = 318

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 151/320 (47%), Positives = 198/320 (61%), Gaps = 6/320 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + VQ   R +  E   L  L  SL       F  AVE I   KGRVV TG+GKSGH+  K
Sbjct: 5   NAVQVGRRVLAVEADALRVLADSL----GEAFANAVETIFNAKGRVVCTGMGKSGHVARK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT + FVH AEASHGDLGMI  DD+++ LS SG+  EL   L YA+RFSIPL
Sbjct: 61  IAATLASTGTQAMFVHPAEASHGDLGMIGPDDVVLALSKSGAGRELADTLAYAKRFSIPL 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+   S +    DI+L LP  PE      APTTS  +Q+A+GDA+A+ALLE R F+ 
Sbjct: 121 IAMTAVADSPLGQAGDILLLLPDAPEGTAEVNAPTTSTTLQIALGDAIAVALLERRGFTA 180

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +     D+MH  D +PLV     + DA+ ++SEKRFG V VVD   
Sbjct: 181 SDFRVFHPGGKLGAMLRTVGDLMHGADELPLVAADAAMPDALLVMSEKRFGAVGVVDNAG 240

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L G+IT+GD+ R+    L T +  +VM   P  I    L   A++++ +  I+VL VV+
Sbjct: 241 HLAGLITDGDLRRHMD-GLLTHTAGEVMTHAPLTIGPGALAAEALKVMNERRITVLFVVE 299

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              + +GI+H  DLLR G+I
Sbjct: 300 RE-RPVGILHVHDLLRAGVI 318


>gi|73540065|ref|YP_294585.1| KpsF/GutQ [Ralstonia eutropha JMP134]
 gi|72117478|gb|AAZ59741.1| KpsF/GutQ [Ralstonia eutropha JMP134]
          Length = 327

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 196/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A  ++  E   +++L     G L+  F  AV+ +    GRVV++GIGKSGHIG 
Sbjct: 8   DRALRLAQSTLQIEAEAVAALS----GRLTPDFSHAVQLVLQCTGRVVVSGIGKSGHIGR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+TRDD++I  S SG + EL +I+   +R    
Sbjct: 64  KVAATLASTGTPAFFVHPAEASHGDLGMVTRDDVLIAFSNSGETGELLSIIPIVKRIGAR 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T   +S +A  AD  L    E E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LISVTGNPESNLAKLADAHLDAGVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF   HPGG LG        DVM SG+++P V+   PL  A+  ++ K     AVVD 
Sbjct: 184 EEDFARSHPGGALGRKLLTHVRDVMRSGNAVPEVRENTPLAQALMEITRKGMAMTAVVDS 243

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K  G+ T+GD+ R     +D  T+ + DVM  NP V+ ED L   A+Q++  + I+ L
Sbjct: 244 DGKAIGVFTDGDLRRLLETPRDWKTVPIGDVMHHNPHVVHEDQLAVEAVQVMEANRINQL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD   + +G +H  DL R  +I
Sbjct: 304 LVVDHDGRLVGALHIHDLTRAKVI 327


>gi|88798183|ref|ZP_01113769.1| predicted sugar phosphate isomerase involved in capsule formation
           [Reinekea sp. MED297]
 gi|88778959|gb|EAR10148.1| predicted sugar phosphate isomerase involved in capsule formation
           [Reinekea sp. MED297]
          Length = 323

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 128/322 (39%), Positives = 182/322 (56%), Gaps = 8/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A R+   E   L  L   L      QF  A + I   +GRVVITG+GKSGHIG+K
Sbjct: 6   NYLAIAKRTFDMEIEALQQLSLKL----DEQFTKACQLILNCQGRVVITGMGKSGHIGNK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH  EASHGD+GMIT  D++I LS SG   E+  +L   +R   PL
Sbjct: 62  MAATLASTGTPSFFVHPGEASHGDMGMITDKDVVIALSNSGEVSEIITLLPLIKRLGTPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I ++    S +   +D+ L    + E+CP  LAPT+S    L +GDALAIALLE+R F+ 
Sbjct: 122 IGLSGNPNSTLGQASDVHLFCGVDTEACPLNLAPTSSTTATLVMGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   D+MH+GD+IP+V     + DA+ ++++K  G V +    
Sbjct: 182 EDFAFSHPGGSLGRKLLLKVGDIMHTGDAIPVVHPEQSVSDALVVMTQKSLGMVTI-QSN 240

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+ T+GD+ R      D     + D+M  +P       L   A+  + +  I+ L+
Sbjct: 241 GDLLGVFTDGDLRRALENDTDFRNTRIADLMHPHPLTTSAQNLAAQALFEMEERKITSLI 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V D   +  G++H  D+LR G+
Sbjct: 301 VTDLDAQVAGVIHMHDILRAGV 322


>gi|170691488|ref|ZP_02882653.1| KpsF/GutQ family protein [Burkholderia graminis C4D1M]
 gi|170143693|gb|EDT11856.1| KpsF/GutQ family protein [Burkholderia graminis C4D1M]
          Length = 327

 Score =  347 bits (890), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L      +L   F  AV+ I   +GRVV++GIGKSGH+  
Sbjct: 8   DRALALARDVLDIEADAVRALRD----QLDDAFVGAVDFILGCRGRVVVSGIGKSGHVAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELVAILPLIKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPSSSLAKLADVHLNSGVAKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +   SDVM +GD +P V     + DA+  L+ KR G  A+VD+
Sbjct: 184 RDDFARSHPGGALGRRLLTYVSDVMRTGDQVPKVTPDATVRDALFQLTAKRMGMTAIVDQ 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++KGI T+GD+ R   +  D   LS+  VM  +P+ I  D L   A++L+ +H I+ +
Sbjct: 244 EDRVKGIFTDGDLRRVLERDGDFRALSIAAVMTADPRTIGPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEAGKLIGALNMHDLFSKKVI 327


>gi|329114439|ref|ZP_08243201.1| Putative phosphosugar isomerase [Acetobacter pomorum DM001]
 gi|326696515|gb|EGE48194.1| Putative phosphosugar isomerase [Acetobacter pomorum DM001]
          Length = 337

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 145/318 (45%), Positives = 198/318 (62%), Gaps = 4/318 (1%)

Query: 27  ALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           A   +  E+ GL +L  +L+    L   F  AVE I A+ GRVV+TGIGKSGHI  K+ +
Sbjct: 19  AADVVRTERAGLDALAEALENPVGLGGAFAEAVEIILALPGRVVVTGIGKSGHIARKVQA 78

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+ + D ++  S SG + EL  I  +ARR  +PL+A+
Sbjct: 79  TLASTGTPAIFVHPAEASHGDLGMVQKGDAVLAFSNSGETTELGDIAAHARRSGLPLLAV 138

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  A + LTLP  PESCP GLAPTTS + QLA GDALA+ALL  R F+  DF
Sbjct: 139 TSRAHSTLASAATVALTLPSLPESCPMGLAPTTSTLTQLAFGDALAVALLRQRGFTATDF 198

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG       ++M + +++PL     P+ D I  ++ K  GCVA++ +   L 
Sbjct: 199 GTYHPGGRLGARLRTVRELMRTDNAMPLATPNTPMRDVIVEMTHKALGCVAILGQNGTLA 258

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--ISVLMVVDD 322
           G+IT+GD+ R    DL T   +DVM  +P  I      + A++L+ +    I+ L V+DD
Sbjct: 259 GLITDGDLRRALDHDLTTTLAKDVMNDSPLTIGPGIFASEALRLMNERKRPITSLFVLDD 318

Query: 323 CQKAIGIVHFLDLLRFGI 340
            +K IG+VH  DL+R G+
Sbjct: 319 DRKPIGVVHVHDLIRAGV 336


>gi|126438533|ref|YP_001057638.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 668]
 gi|126218026|gb|ABN81532.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 668]
          Length = 327

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L GE    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEANAVRTLAEQLDGE----FVAAVGLLLNCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T+DD+ + +S SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTKDDVFVAISNSGESEELVAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  +D+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPASSLATLSDVHLNAGVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AV+D+
Sbjct: 184 SDDFARSHPGGALGRRLLTYVRDVMRTGDEVPAVPLDATLSDALFQITAKRMGMTAVIDD 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D   L + DVM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 ANRVAGIFTDGDLRRVLERDGDFRRLPIVDVMTRHPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+    IG ++  DL    +I
Sbjct: 304 LVVDERGALIGALNMHDLFSKKVI 327


>gi|86147575|ref|ZP_01065885.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio sp. MED222]
 gi|85834614|gb|EAQ52762.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio sp. MED222]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/318 (40%), Positives = 196/318 (61%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TL
Sbjct: 11  AKQVLETEVAGLTQLDQYFNDD----FSKACDLILNNKGKVVVMGMGKSGHIGNKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT +FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T 
Sbjct: 67  ASTGTSAFFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF +
Sbjct: 127 KPASNMATLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +   D+MH+GD++P V     + DA+  +S+K  G  A+V E  ++KG
Sbjct: 187 SHPGGALGRQLLLKLDDIMHTGDALPTVAPDALVRDALLEISQKGLGMTAIVGEDGQMKG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D++   + DVM  NP V   + L    + L++  +I+ LM+ D+ 
Sbjct: 247 IFTDGDLRRILDKRIDIHNTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLCDN- 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|261364295|ref|ZP_05977178.1| arabinose 5-phosphate isomerase [Neisseria mucosa ATCC 25996]
 gi|288567545|gb|EFC89105.1| arabinose 5-phosphate isomerase [Neisseria mucosa ATCC 25996]
          Length = 324

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 206/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   QYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 62  IAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 ICITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH  D++P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKDDALPAVRLGTPLKEAIVSMSEKGLGMLAVTDNQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +    + L+V+++M  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQQRDRFDGLTVDEIMHPSPKTIPAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLMARIV 324


>gi|312897538|ref|ZP_07756958.1| putative arabinose 5-phosphate isomerase [Megasphaera
           micronuciformis F0359]
 gi|310621390|gb|EFQ04930.1| putative arabinose 5-phosphate isomerase [Megasphaera
           micronuciformis F0359]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 197/326 (60%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A   +  E  G+  L  +L       F  AV  I   +GRV++TG+GKSGHI  K
Sbjct: 2   NILEEAREVLRVEAAGIERLIPTLDQR----FVNAVNMIFESRGRVIVTGMGKSGHIARK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FF+H AEA HGDLGM+T DD ++  S SG + E+  IL   +R    L
Sbjct: 58  VAATLASTGTPAFFLHPAEAIHGDLGMVTIDDTVLAFSNSGETTEILNILPSLKRIGPKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A  ADIVL +  E E+CP GLAPTTS  + LA+GDALA+ALL++ NF++
Sbjct: 118 IAVVGNMNSTLAKTADIVLDVTVEKEACPLGLAPTTSTTVALALGDALAVALLQAHNFTK 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + F V HPGG LG    +   DVMH G   P++     + DA+ +++EK  G VAV  E 
Sbjct: 178 DQFAVFHPGGALGKKLLLTVKDVMHKGVDNPVIGEESTVQDALFMMTEKGLGAVAVTRED 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
             L G++T+GD+ R      +     V+ +M KNP+ I +D L   A+ ++ ++    I+
Sbjct: 238 GTLAGLVTDGDVRRGLETGSNFLQWPVDAMMTKNPRRISQDKLAAEALHIMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL V+D+  K  G++H  DLLR G++
Sbjct: 298 VLPVIDENDKVTGMIHLTDLLRQGVV 323


>gi|212633562|ref|YP_002310087.1| KpsF/GutQ [Shewanella piezotolerans WP3]
 gi|212555046|gb|ACJ27500.1| KpsF/GutQ [Shewanella piezotolerans WP3]
          Length = 325

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 129/325 (39%), Positives = 206/325 (63%), Gaps = 6/325 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +    Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGHIG
Sbjct: 4   EQQLRQWGTKVIDIEKQALDNLHQYVD---SSEFAQACQLILQCTGKVIVMGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  +
Sbjct: 61  NKISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGL 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I++T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R F
Sbjct: 121 PMISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGF 180

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +++DF + HPGG LG    +  SDVMHSG+ +PLVK    + DA+  +S+K  G  A+VD
Sbjct: 181 TKDDFALSHPGGSLGRKLLLKVSDVMHSGNELPLVKHDICITDALYEISKKGLGMTAIVD 240

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GI T+GD+ R      +L T S+ DVM K    I ++ L   A++++ + NI+ 
Sbjct: 241 AANTLVGIFTDGDLRRVIDAEVNLRTTSIADVMSKGCVTITDNVLAAEALKVMEEKNING 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V++  Q+ +G ++ LD+++ G+I
Sbjct: 301 LIVINSKQQPVGALNMLDMVKAGVI 325


>gi|49474989|ref|YP_033030.1| polysialic acid capsule expression protein [Bartonella henselae
           str. Houston-1]
 gi|49237794|emb|CAF26988.1| Polysialic acid capsule expression protein [Bartonella henselae
           str. Houston-1]
          Length = 331

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 178/329 (54%), Positives = 234/329 (71%), Gaps = 1/329 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
             +  H L+  STV  A ++I +EK+GL +LE +L G LS  F  AV+ I+   G VVIT
Sbjct: 2   TAQSSHMLVLQSTVTSAFKTIASEKQGLEALEEALLGYLSSAFQAAVQTIRNANGHVVIT 61

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I
Sbjct: 62  GLGKSGHIGAKIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETSELSGI 121

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + +A RF  PLIA+TS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA
Sbjct: 122 INHAARFRTPLIAMTSGEHSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALA 181

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE R F+  DF + HPGG LG       D+MH G+SIPLV  G  +  A+++L EK 
Sbjct: 182 VALLEMRGFTATDFKIYHPGGSLGASLKYVRDIMHQGESIPLVAQGTAMAKAMSVLVEKH 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV VV++  +L GI+T+GD+ RN H +L+  +V+++M K+PK++  +TL+  A   + 
Sbjct: 242 FGCVGVVNQEGELIGIVTDGDLARNIHVNLSKFNVDELMTKDPKIVEPNTLVGAATAFIN 301

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +H+I    VV + +K IGIVHF DLLR G
Sbjct: 302 EHHIGAFFVV-ENKKPIGIVHFHDLLRIG 329


>gi|148977769|ref|ZP_01814325.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrionales bacterium SWAT-3]
 gi|145962983|gb|EDK28253.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrionales bacterium SWAT-3]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 127/318 (39%), Positives = 196/318 (61%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TL
Sbjct: 11  AKQVLETEVAGLTQLDQYFNDD----FCKACDLILNNKGKVVVMGMGKSGHIGNKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT +FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T 
Sbjct: 67  ASTGTSAFFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF +
Sbjct: 127 KPASNMATLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +   D+MH+GD++P+V     + DA+  +S+K  G  A+VD+  ++ G
Sbjct: 187 SHPGGALGRQLLLKLDDIMHTGDALPVVAPDALVRDALLEISQKGLGMTAIVDQDGQMAG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + DVM  NP V   + L    + L++  +I+ LM+    
Sbjct: 247 IFTDGDLRRILDKRVDIHSTQIGDVMTLNPTVADPNMLAVEGLNLMQAKSINGLMLC-QD 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|254670185|emb|CBA05287.1| putative isomerase [Neisseria meningitidis alpha153]
          Length = 351

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 140/333 (42%), Positives = 209/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++  N   +  A   +  E  GL      +  EL   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAGNEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +T     E+CP GLAPT+S    +A+GDALA+
Sbjct: 139 PALKRKDITLVCITARPDSTMARHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D     IG ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLIGALNMHDLLAARIV 351


>gi|153834568|ref|ZP_01987235.1| arabinose 5-phosphate isomerase [Vibrio harveyi HY01]
 gi|148869011|gb|EDL68056.1| arabinose 5-phosphate isomerase [Vibrio harveyi HY01]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 128/319 (40%), Positives = 197/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L+         QF  A E I +  G+VV+ G+GKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVSALQQLDQY----FDDQFEQACELILSNNGKVVVMGMGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLSDLHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ +VM +NP     + L    + L++  NI+ L++ D+
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGEVMTQNPTTAHPEMLAVEGLNLMQDKNINALILCDN 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 -NKIVGALNMHDLLKAGVM 323


>gi|90580194|ref|ZP_01236001.1| hypothetical sugar phosphate isomerase [Vibrio angustum S14]
 gi|90438496|gb|EAS63680.1| hypothetical sugar phosphate isomerase [Vibrio angustum S14]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 123/318 (38%), Positives = 198/318 (62%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E + L ++   +       F+ A + +   +G+V++ G+GKSGHIG KLA+TL
Sbjct: 11  GKKVLDIEIQALQNISQYI----DDSFNKACQLVLDCQGKVIVMGMGKSGHIGRKLAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGMI ++D++I +S SG + E+ A+L   +R  IP+I++T 
Sbjct: 67  ASTGTPAFFVHPGEASHGDLGMIKQEDVVIAISNSGEASEILALLPVIKRLGIPMISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  A I L +  E E+CP  LAPT+S    L +GDALAI+++E+R F+ +DF +
Sbjct: 127 KPMSSMAKMAVINLQITVEKEACPLNLAPTSSTTATLVMGDALAISVMEARGFTADDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +DVMH+G  +P+++    + DA+  +S+K  G  A+V+  Q+L G
Sbjct: 187 SHPGGALGRKLLMRIADVMHTGKMLPIIEETASIKDALLEISKKGLGMTAIVNNKQQLSG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R      D++  S+ DVM  NP+ I    L    ++++    I+ L+V ++ 
Sbjct: 247 IFTDGDLRRLLDNHVDIHNTSIGDVMSCNPQTISPQLLAAEGLKIMEDRKINGLLVTENA 306

Query: 324 QKAIGIVHFLDLLRFGII 341
           Q  +G ++  DLL+ G++
Sbjct: 307 Q-LVGALNMHDLLKAGVM 323


>gi|218710672|ref|YP_002418293.1| arabinose 5-phosphate isomerase [Vibrio splendidus LGP32]
 gi|218323691|emb|CAV20025.1| Arabinose 5-phosphate isomerase [Vibrio splendidus LGP32]
          Length = 323

 Score =  346 bits (889), Expect = 2e-93,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 197/318 (61%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG+K+A+TL
Sbjct: 11  AKQVLETEVAGLTQLDQYFNDD----FSKACDLILNNKGKVVVMGMGKSGHIGNKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT +FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T 
Sbjct: 67  ASTGTSAFFVHPGEAAHGDLGMIEPGDIVIAISNSGESGEILSLFPVLKRLNIKIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF +
Sbjct: 127 KPASNMATLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +   D+MH+GDS+P+V     + DA+  +S+K  G  A+V E  ++KG
Sbjct: 187 SHPGGALGRQLLLKLDDIMHTGDSLPIVAPDALVRDALLEISQKGLGMTAIVGEDGQMKG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D+++  + DVM  NP V   + L    + L++  +I+ LM+ D  
Sbjct: 247 IFTDGDLRRILDKRIDIHSTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLCD-S 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|254229282|ref|ZP_04922700.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262393180|ref|YP_003285034.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|151938206|gb|EDN57046.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262336774|gb|ACY50569.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
          Length = 323

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 128/319 (40%), Positives = 195/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L          QF  A E I +  G+VV+ GIGKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVAALQEL----DTYFDDQFEKACELILSNSGKVVVMGIGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D+++ +S SG S+E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISPGDIVLAISNSGESNEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLSDLHLQITVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGEALPKVSPNALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ +VM  NP     D L    + L++  NI+ L++   
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGEVMTTNPTTAHPDMLAVEGLNLMQNKNINALILC-K 304

Query: 323 CQKAIGIVHFLDLLRFGII 341
            +K +G ++  DLL+ G++
Sbjct: 305 DEKIVGALNMHDLLKAGVM 323


>gi|254787684|ref|YP_003075113.1| arabinose 5-phosphate isomerase [Teredinibacter turnerae T7901]
 gi|237685086|gb|ACR12350.1| arabinose 5-phosphate isomerase [Teredinibacter turnerae T7901]
          Length = 322

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 143/327 (43%), Positives = 210/327 (64%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   +Q A R+I  E   + +LE  + GE    F  A EKI +  GRVV++G+GKSGH
Sbjct: 1   MSETDLIQSAQRTIALEIAAVQALEERINGE----FVAACEKILSCSGRVVVSGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVH  EASHGDLGMITRDD+ + +S SG+S E+ AIL + +R 
Sbjct: 57  IGKKIAATLASTGTPAFFVHPGEASHGDLGMITRDDVFLCISNSGNSPEMVAILPWIKRM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP++A+T ++ S +A  AD++L +    E+CP  LAPT+S  + L +GDALA+ALLE+R
Sbjct: 117 GIPVVAMTGKSNSPLAEAADVILDIAVATEACPLDLAPTSSTTVTLVLGDALALALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HPGG LG    +  +DVMH G+++P+V    P+++A+  +S K FG   V
Sbjct: 177 GFTAEDFAYSHPGGTLGRRLLLHVADVMHDGETVPIVTTTTPVLEALGEMSRKGFGITTV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L G+ T+GD+ R   +D+     S+E VM +  + I    L   A  L+  H I
Sbjct: 237 VDATGELVGVFTDGDLRRCLDRDIEVKNASIEQVMSRGGRTITPQALAAEAFNLMETHKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V D+  K +GI+H  D+L+ G++
Sbjct: 297 TALVVTDN-NKPVGILHMHDMLQAGLV 322


>gi|167625605|ref|YP_001675899.1| KpsF/GutQ family protein [Shewanella halifaxensis HAW-EB4]
 gi|167355627|gb|ABZ78240.1| KpsF/GutQ family protein [Shewanella halifaxensis HAW-EB4]
          Length = 325

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 125/324 (38%), Positives = 203/324 (62%), Gaps = 6/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N   Q   + I  EK+ L +L   +    S +F  A + I    G+V++ G+GKSGHIG+
Sbjct: 5   NQLRQWGTKVIDIEKQALDNLYQYID---SSEFAQACQLILQCTGKVIVMGMGKSGHIGN 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++TLASTGTP+FFVH  EASHGDLG+++ +D+++ +S SG S E+  ++   +R  +P
Sbjct: 62  KISATLASTGTPAFFVHPGEASHGDLGVLSENDIVLAISNSGESSEILTLMPVIKRMGLP 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I++T +  S +A  A + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+
Sbjct: 122 MISVTGKPDSNMAKLAQLHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFT 181

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++DF + HPGG LG    +  SDVMH G+ +P V+    + +A+  +S+K  G  AVVD 
Sbjct: 182 QDDFALSHPGGSLGRKLLLKVSDVMHKGNELPSVQDDICITEALYEISKKGLGMTAVVDC 241

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L GI T+GD+ R      +L T  + +VM K    I ++ L   A++++   +I+ L
Sbjct: 242 NNTLVGIFTDGDLRRVIDAEVNLRTTPIAEVMTKGCVTITDNVLAAEALKVMDTKSINGL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V++D Q+ +G ++ LD+++ G+I
Sbjct: 302 IVINDKQQPVGALNMLDMVKAGVI 325


>gi|323524688|ref|YP_004226841.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1001]
 gi|323381690|gb|ADX53781.1| KpsF/GutQ family protein [Burkholderia sp. CCGE1001]
          Length = 327

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV+ I   +GRVV++GIGKSGH+  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----AFVGAVDFILGCRGRVVVSGIGKSGHVAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ + LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFLALSNSGETEELVAILPLIKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPGSSLAKLADVHLNSGVAKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +   SDVM +GD +P V     + DA+  L+ KR G  A+VD+
Sbjct: 184 RDDFARSHPGGALGRRLLTYVSDVMRTGDQVPKVTPEATVRDALFQLTAKRMGMTAIVDQ 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++KGI T+GD+ R   +  D   LS+  VM  +P+ I  D L   A++L+ +H I+ +
Sbjct: 244 EDRVKGIFTDGDLRRVLERDGDFRALSIAAVMTADPRTIGPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEAGKLIGALNMHDLFSKKVI 327


>gi|308388560|gb|ADO30880.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis alpha710]
          Length = 351

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 210/333 (63%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   +  E  GL      +  +L   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAENGKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S++A HADI +T     E+CP GLAPTTS    +A+GDALA+
Sbjct: 139 PALKRKDITLVCITARPDSIMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++  PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D     IG ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLIGALNMHDLLAARIV 351


>gi|328542463|ref|YP_004302572.1| Sugar isomerase, KpsF/GutQ family protein [polymorphum gilvum
           SL003B-26A1]
 gi|326412210|gb|ADZ69273.1| Sugar isomerase, KpsF/GutQ family protein [Polymorphum gilvum
           SL003B-26A1]
          Length = 337

 Score =  346 bits (888), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 154/336 (45%), Positives = 227/336 (67%), Gaps = 1/336 (0%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
             S    +   G      + ++ A R++  E   L +L  +L+  L   F   V+ +++I
Sbjct: 1   MQSSIAPLDTNGLKAESKACLESADRTLATEISALIALRDALRNGLGTPFVRTVDLLRSI 60

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            GRV++TGIGKSGHIG+K+A+++ASTGTP+FFVHA+EASHGDLGMIT DD+++ +SWSG 
Sbjct: 61  SGRVIVTGIGKSGHIGTKMAASMASTGTPAFFVHASEASHGDLGMITPDDVVVAISWSGE 120

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + EL +I+ Y RRF +PL+AITS  +S +   ADIVL +P+  E+CPHGLAPT+S ++Q+
Sbjct: 121 TMELASIIAYTRRFKVPLVAITSSPQSALGKAADIVLAMPQVTEACPHGLAPTSSTLIQM 180

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           AIGDALA+ALLE+R F+  +F + HPGGKLG     A D+MHSG+++PL   G  + +AI
Sbjct: 181 AIGDALAVALLEARGFTAQEFRIFHPGGKLGASLRLARDIMHSGEAMPLTPKGTLMREAI 240

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            ++++K FG V VVDE  +L GI+T+GD+ R+   +    +VE++M   PK I  D L  
Sbjct: 241 VMMTQKGFGIVGVVDELNRLVGIVTDGDLRRHISTNFLDKTVEEIMTSTPKTIPGDILSA 300

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            A++ +   +I+ + VV +  + IGI+H  DLLR G
Sbjct: 301 AALEFINASSITAVFVV-EDGRPIGIIHLHDLLRIG 335


>gi|56695011|ref|YP_165356.1| arabinose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
 gi|56676748|gb|AAV93414.1| arabinose 5-phosphate isomerase [Ruegeria pomeroyi DSS-3]
          Length = 322

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 204/324 (62%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            ++S +  A + ++ E R L +L  SL       F  AVE I   KGRV+++GIGKSGHI
Sbjct: 3   DRSSFIDTARQVVLDEARALDALSESL----GDGFAEAVELILRTKGRVIVSGIGKSGHI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP++FVH AEASHGDLGM++ DD+++ +S SG + EL  +L + RRF+
Sbjct: 59  GHKIAATLASTGTPAYFVHPAEASHGDLGMLSGDDVVLAISNSGEAPELANLLAFTRRFA 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ++S+++S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+
Sbjct: 119 IPLIGLSSKSESSLMQQADVHLLIPALGEACGFGMVPSISTTLTLAMGDALAIALMKYRD 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   +F V HPGGKLG      SD+MH G+++PL+    P+ +A+  +S K FG V V D
Sbjct: 179 FRPENFRVFHPGGKLGARLSRVSDLMHGGEAVPLIAADTPMSEALLEISRKGFGVVGVTD 238

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GI+T+GD+ R+    L   +   VM  NP  I  D+L   A+ ++    I+ L 
Sbjct: 239 GAGHLAGIVTDGDLRRHMS-GLLDKTAAQVMTANPTTIAPDSLAEEAVAIMNARKITSLF 297

Query: 319 VVD--DCQKAIGIVHFLDLLRFGI 340
           VVD  +   A G++H  D LR G+
Sbjct: 298 VVDPAEPGVARGLLHIHDCLRVGL 321


>gi|262376232|ref|ZP_06069462.1| arabinose 5-phosphate isomerase [Acinetobacter lwoffii SH145]
 gi|262308833|gb|EEY89966.1| arabinose 5-phosphate isomerase [Acinetobacter lwoffii SH145]
          Length = 347

 Score =  346 bits (887), Expect = 3e-93,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E+  L  L + +       F  A E I    GR+VITG+GKSGHIG K+A+
Sbjct: 31  KVALETLRIEENALQILATQIDDR----FSRACEIILQCTGRLVITGMGKSGHIGRKMAA 86

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+   D++I +S SG SDE+  ++   +   IPLI I
Sbjct: 87  TFASTGTPSFFMHPGEAGHGDLGMLVAGDVLIAISNSGKSDEIMMLMPLIKHLEIPLITI 146

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + +++  +  +AD+ LTL    E+CP GLAPT+S    LA+GDALA+ALL++R F+ +DF
Sbjct: 147 SGDDRGPMPQNADVALTLGNIQEACPLGLAPTSSTTATLALGDALAVALLDARGFTSDDF 206

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +M +G  +P V     +   +  +S KR G   VVDE   L
Sbjct: 207 ARSHPAGALGKRLLLHVKHLMRTGADLPKVSPDTAMNKVLYEISNKRLGLTTVVDENDVL 266

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   K       L+++DVM KNP  I ++    VA++ + +H I+  +VV
Sbjct: 267 LGIFTDGDLRRLIDKQQGFDVNLAIQDVMTKNPLTISQEARAVVALERMNEHKINQFVVV 326

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K IG++   DL++ G+
Sbjct: 327 DDANKVIGVISMHDLIQAGV 346


>gi|302037869|ref|YP_003798191.1| arabinose-5-phosphate isomerase [Candidatus Nitrospira defluvii]
 gi|300605933|emb|CBK42266.1| Arabinose-5-phosphate isomerase [Candidatus Nitrospira defluvii]
          Length = 345

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 130/336 (38%), Positives = 198/336 (58%), Gaps = 7/336 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
            +  R      ++++VQ   R +  E R +  L + L       F  AV  +   +G+VV
Sbjct: 14  PAPKRAARRPQQDASVQEGRRVLEIEARAVQELMARLDDR----FASAVNFLYECQGKVV 69

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I+G+GKSG IG K+A+TLASTGTPSFF+H AE  HGDLGM+ R D++I +S SG + E+ 
Sbjct: 70  ISGMGKSGLIGQKIAATLASTGTPSFFLHPAEGVHGDLGMLARRDVLIAISNSGETQEVL 129

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L + +R +IP++ +T +  S +A ++D+ L +  + E+CP GLAPT S    LA+GDA
Sbjct: 130 QLLPFVKRMNIPVVGMTGKMGSTLAKNSDVTLDVSVDEEACPLGLAPTASTTATLAMGDA 189

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           LA+ALL+ R F  +DF   HPGG LG    V   D+M  GD +P V+      D I  ++
Sbjct: 190 LAVALLQKRGFKHDDFAQFHPGGTLGRRLLVKVRDLMQHGDHLPRVRDNVSGADMILEMT 249

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K+ G   VVD    L GI+T+GD+ R      D + ++  D+  + PK I  D L T A
Sbjct: 250 SKKLGMTTVVDAKGALYGIVTDGDLRRFIQAGGDFSNITAGDLASRQPKTIGPDELATTA 309

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+ + +I+ L+V++   +  G++H  DLL+ GI+
Sbjct: 310 VALMERFSITALVVLERPNRLAGVIHLHDLLKHGIV 345


>gi|91790720|ref|YP_551672.1| KpsF/GutQ family protein [Polaromonas sp. JS666]
 gi|91699945|gb|ABE46774.1| KpsF/GutQ family protein [Polaromonas sp. JS666]
          Length = 335

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 139/323 (43%), Positives = 192/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A ++   E   +  L     G +  +F  AVE +   +GRVV+ G+GKSGHIG K
Sbjct: 17  QALALARKTFEIEAAAVQGLA----GRVGPEFARAVELMLTCRGRVVVMGMGKSGHIGRK 72

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+ FVH AEASHGDLGMIT  D+++ +S SG S+EL +IL    R  +PL
Sbjct: 73  IAATLASTGTPAMFVHPAEASHGDLGMITGLDVVLAISNSGESEELTSILPVLSRQGVPL 132

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +AIT   +S +A  A + L      E+CP  LAPT S   QLA+GDALA+ALL++R F E
Sbjct: 133 VAITGGLQSALAKQARVTLDSSVAQEACPLNLAPTASTTAQLALGDALAVALLDARGFRE 192

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG       SDVM SGD++P V       + +  +S K  G  AVVD  
Sbjct: 193 EDFARSHPGGALGRKLLTHVSDVMRSGDAVPKVGPDTSFTELMREMSAKGLGASAVVDAQ 252

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           Q++ GI T+GD+ R   K  DL +    DVM  +P+ +  D L   A++L+ Q +I+ ++
Sbjct: 253 QRVLGIFTDGDLRRLVEKGVDLRSSRAGDVMHAHPRTVRPDALAVEAVELMEQFSITSVL 312

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVDD     G ++  DL+R  +I
Sbjct: 313 VVDDAGVLCGALNTNDLMRAKVI 335


>gi|296161545|ref|ZP_06844350.1| KpsF/GutQ family protein [Burkholderia sp. Ch1-1]
 gi|295888189|gb|EFG68002.1| KpsF/GutQ family protein [Burkholderia sp. Ch1-1]
          Length = 327

 Score =  346 bits (887), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 189/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L      +L   F  AV+ I   +GRVV++GIGKSGH+  
Sbjct: 8   DRALALARDVLDIEADAVRALRD----QLDDGFVGAVDFILGCRGRVVVSGIGKSGHVAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T +D+ I LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTAEDVFIALSNSGETEELMAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPSSSLAQLADVHLNSGVAKEACPMNLAPTASTTAALALGDALALAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V     + DA+  L+ KR G  A+VD 
Sbjct: 184 RDDFARSHPGGALGRRLLTYVRDVMRTGDDLPKVTPEATVRDALFQLTAKRMGMTAIVDH 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + GI T+GD+ R   +  D   L +  VM   P+ I  D L   A++L+ +H I+ +
Sbjct: 244 DDHVAGIFTDGDLRRVLERDGDFRQLPISSVMTAGPRTIGPDQLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEAGKLIGALNMHDLFSKKVI 327


>gi|149190592|ref|ZP_01868861.1| putative polysialic acid capsule expression protein [Vibrio
           shilonii AK1]
 gi|148835590|gb|EDL52558.1| putative polysialic acid capsule expression protein [Vibrio
           shilonii AK1]
          Length = 322

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 129/327 (39%), Positives = 193/327 (59%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     V  A R +  E + L  LE         QF    + I   +G+V++ G+GKSGH
Sbjct: 1   MSGFDYVSAAKRVLDTEVQALQHLERY----FDEQFESVCDAILNHQGKVIVMGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGT +FFVH  EA+HGDLGMI   DL+I +S SG S E+ ++    +R 
Sbjct: 57  IGKKIAATLASTGTSAFFVHPGEAAHGDLGMIEARDLVIAISNSGESHEIISLFPVFKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I  +++T + +S +A  +D  L +    E+CP GLAPT+S+   L +GDALAIALLE+R
Sbjct: 117 GITTVSMTGKPESNMAKLSDFHLQITVPKEACPLGLAPTSSSTATLVMGDALAIALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F E DF + HPGG LG    +  SD+MHSG ++P+V     + DA+  +S+K  G   +
Sbjct: 177 GFGEEDFALSHPGGALGRKLLLKLSDIMHSGKALPVVGPQTLVRDALLEISDKGLGMTTI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD    L GI T+GD+ R   K  D++  ++ +VM  NP     + L    + L++  NI
Sbjct: 237 VDNDMNLLGIFTDGDLRRILDKRVDIHDTTIGEVMTVNPTTAAPNMLAAEGLNLMQSKNI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+++DD  K +G ++  DLL+ G++
Sbjct: 297 NGLVLLDD-NKVVGALNMHDLLKAGVM 322


>gi|28899440|ref|NP_799045.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839289|ref|ZP_01991956.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|260363391|ref|ZP_05776243.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus K5030]
 gi|260879326|ref|ZP_05891681.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AN-5034]
 gi|260895715|ref|ZP_05904211.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus Peru-466]
 gi|28807676|dbj|BAC60929.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149747190|gb|EDM58178.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|308087427|gb|EFO37122.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus Peru-466]
 gi|308093076|gb|EFO42771.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AN-5034]
 gi|308111196|gb|EFO48736.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus K5030]
          Length = 323

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A + +  E   L  L          QF  A E I +  G+VV+ G+GKSGHIG+K+A+
Sbjct: 9   TAAKQVLDIEVAALQEL----DKYFDEQFEQACELILSNSGKVVVMGMGKSGHIGNKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R +I +I++
Sbjct: 65  TLASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLNIKIISM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF
Sbjct: 125 TGKPESNMAKLADLHLQITVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   +
Sbjct: 185 ALSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAM 244

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T ++ +VM KNP     + L    + L++  NI+ L++  
Sbjct: 245 LGIFTDGDLRRTLDKRIDIHTTAIGEVMTKNPTTAHPEMLAVEGLNLMQNKNINALILCK 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K +G ++  DLL+ G++
Sbjct: 305 ED-KIVGALNMHDLLKAGVM 323


>gi|91781729|ref|YP_556935.1| KpsF/GutQ [Burkholderia xenovorans LB400]
 gi|91685683|gb|ABE28883.1| KpsF/GutQ [Burkholderia xenovorans LB400]
          Length = 327

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 189/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L      +L   F  AV+ I   +GRVV++GIGKSGH+  
Sbjct: 8   DRALALARDVLDIEADAVRALRD----QLDDGFVGAVDFILGCRGRVVVSGIGKSGHVAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T +D+ I LS SG ++EL AIL   +R    
Sbjct: 64  KLAATLASTGTPAFFVHPAEASHGDLGMVTAEDVFIALSNSGETEELMAILPLIKRLGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAMTGRPSSSLAQLADVHLNSGVAKEACPMNLAPTASTTAALALGDALALAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD +P V     + DA+  L+ KR G  A+VD 
Sbjct: 184 RDDFARSHPGGALGRRLLTYVRDVMRTGDDLPKVTPEATVRDALFQLTAKRMGMTAIVDH 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + GI T+GD+ R   +  D   L +  VM   P+ I  D L   A++L+ +H I+ +
Sbjct: 244 DDHVAGIFTDGDLRRVLEREGDFRQLPIASVMTAGPRTIGPDQLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 304 LVVDEAGKLIGALNMHDLFSKKVI 327


>gi|240849843|ref|YP_002971231.1| sugar isomerase [Bartonella grahamii as4aup]
 gi|240266966|gb|ACS50554.1| sugar isomerase [Bartonella grahamii as4aup]
          Length = 330

 Score =  345 bits (886), Expect = 4e-93,   Method: Composition-based stats.
 Identities = 176/329 (53%), Positives = 230/329 (69%), Gaps = 1/329 (0%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +      +     V  AL+++ +EK+GL +LE SL G LS     AV+ I+  +G VVIT
Sbjct: 1   MITPSTHMALQGAVASALKTLASEKQGLEALEKSLLGTLSSSVEAAVQTIRNARGHVVIT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TLASTGTP+FFVHAAEA+HGDLGMI  D++I+ LSWSG + EL  I
Sbjct: 61  GLGKSGHIGTKIAATLASTGTPAFFVHAAEANHGDLGMIGSDNVILALSWSGETQELSGI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + YA RF IPLIA+TS   SV+   ADIVL LPK  E+CPHGLAPTTS IMQLA+GDALA
Sbjct: 121 MSYAARFRIPLIAMTSSEYSVLGRQADIVLLLPKIEEACPHGLAPTTSTIMQLAMGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ++LLE R F+  DF + HPGG LG       D+MH GD+IPLV  G  + +A+ +L EK 
Sbjct: 181 VSLLEMRGFTATDFKIYHPGGSLGASLKYVCDIMHEGDNIPLVMQGTSMTEAMNVLVEKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           FGCV VV++  +L GI+T+GD+ RN H +L+  +V++VM K PKV+  +TL+  A   + 
Sbjct: 241 FGCVGVVNQEGELIGIVTDGDLARNMHFNLSKFNVDEVMTKAPKVVKPNTLVGAATAFIN 300

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            H+I    VV + +K IGIVHF DLLR G
Sbjct: 301 DHHIGAFFVV-EDKKPIGIVHFHDLLRIG 328


>gi|255318180|ref|ZP_05359419.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens SK82]
 gi|262379611|ref|ZP_06072767.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens
           SH164]
 gi|255304726|gb|EET83904.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens SK82]
 gi|262299068|gb|EEY86981.1| arabinose 5-phosphate isomerase [Acinetobacter radioresistens
           SH164]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 133/320 (41%), Positives = 188/320 (58%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A  ++  E++ L  L + +       F  A E I   KGRVV+TG+GKSGHIG K+A+
Sbjct: 9   KVARETLQIEQQALEILAAQIDTR----FERACEIILQCKGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLEVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +      +  +AD+ LTL +  E+CP GLAPT+S    LA+GDALA+ALLE+R F+ +DF
Sbjct: 125 SGTESGPMPQNADVALTLGELTEACPLGLAPTSSTTATLALGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH  D +P V    P+   +  +S KR G   VVD    L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHKDDELPKVSPDTPMNQVLYEISNKRLGLTTVVDTQNTL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   +       L V +VMIK+P  I ++     A++LLR   I+  +VV
Sbjct: 245 LGIFTDGDLRRLIDRQQGFDVNLPVSEVMIKDPYTISQEARAVEALELLRDKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   K IG++   DL++ G+
Sbjct: 305 DQSNKVIGVISMHDLIQAGV 324


>gi|120600245|ref|YP_964819.1| KpsF/GutQ family protein [Shewanella sp. W3-18-1]
 gi|146291825|ref|YP_001182249.1| KpsF/GutQ family protein [Shewanella putrefaciens CN-32]
 gi|120560338|gb|ABM26265.1| KpsF/GutQ family protein [Shewanella sp. W3-18-1]
 gi|145563515|gb|ABP74450.1| KpsF/GutQ family protein [Shewanella putrefaciens CN-32]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 133/327 (40%), Positives = 203/327 (62%), Gaps = 6/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + ++   Q   + I  EK  L +L   +    S +F  A E I    G+V++ G+GKSGH
Sbjct: 2   VDQSQLRQWGSKVIDIEKLALDNLYQYVD---SIEFVQACELILNCSGKVIVMGMGKSGH 58

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+++TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG S E+ A++   +R 
Sbjct: 59  IGNKISATLASTGTPAFFVHPGEASHGDLGVLSDNDIILAISNSGESSEILALMPVIQRK 118

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IA+T +  S +A  A I L +    E+CP GLAPT+S    L +GDA+AIALL+++
Sbjct: 119 AIPVIAMTGKPDSTMARLAKIHLCIEVPEEACPLGLAPTSSTTATLVMGDAIAIALLQAK 178

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF + HPGG LG    +   DVMHSG+ +PLV     + +A+  +S+K  G  AV
Sbjct: 179 GFTREDFAMSHPGGALGRKLLLRVRDVMHSGNELPLVNHDICITEALYEISKKGLGMTAV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +DE  KL GI T+GD+ R      +L T  + +VM +N   I +  L   A+Q++   NI
Sbjct: 239 IDEQHKLVGIFTDGDLRRVIDAEVNLRTTPIANVMTRNCITITDSALAAQALQVMDSKNI 298

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V++     IG ++ LDL++ G+I
Sbjct: 299 NGLIVINKDHHPIGALNMLDLVKAGVI 325


>gi|293608602|ref|ZP_06690905.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292829175|gb|EFF87537.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325121584|gb|ADY81107.1| D-arabinose 5-phosphate isomerase [Acinetobacter calcoaceticus
           PHEA-2]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 137/319 (42%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ L  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQALDVLATQI----GDSFNRACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VDE + L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNQVLYEISNKRLGLTTIVDEQEHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L    IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNLKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|260900288|ref|ZP_05908683.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ4037]
 gi|308107547|gb|EFO45087.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ4037]
 gi|328471423|gb|EGF42318.1| putative polysialic acid capsule expression protein [Vibrio
           parahaemolyticus 10329]
          Length = 323

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 195/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L          QF  A E I +  G+VV+ G+GKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVAALQEL----DKYFDEQFEQACELILSNSGKVVVMGMGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLADLHLQITVPQEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ +VM KNP     + L    + L++  NI+ L++  +
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGEVMTKNPTTAHPEMLAVEGLNLMQNKNINALILCKE 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 D-KIVGALNMHDLLKAGVM 323


>gi|299770840|ref|YP_003732866.1| Arabinose 5-phosphate isomerase [Acinetobacter sp. DR1]
 gi|298700928|gb|ADI91493.1| Arabinose 5-phosphate isomerase [Acinetobacter sp. DR1]
          Length = 325

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 137/319 (42%), Positives = 191/319 (59%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ L  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQALDVLATQIND----SFNQACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
             +K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RTDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VDE + L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPDTPMNQVLYEISNKRLGLTTIVDEQEHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L    IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNLKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|90022816|ref|YP_528643.1| arabinose-5-phosphate isomerase [Saccharophagus degradans 2-40]
 gi|89952416|gb|ABD82431.1| KpsF/GutQ family protein [Saccharophagus degradans 2-40]
          Length = 323

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 140/327 (42%), Positives = 202/327 (61%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     ++ A R+I  E   ++++   +       F  A E I A +GR V+TGIGKSGH
Sbjct: 1   MSTFDFIKSAQRTISMEVAAVTAMAQRIDS----SFSQACEIILACQGRTVVTGIGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A++LASTGTP+FFVH AEASHGDLGMIT +D++I LS SGSS E+ A+L    R 
Sbjct: 57  IAKKIAASLASTGTPAFFVHPAEASHGDLGMITSNDVVIALSNSGSSSEMVALLPTLTRV 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I++  +  S +A  A++ L +  E E+CP  LAPT+S    L +GDAL +ALLE+R
Sbjct: 117 GAKIISLCGKADSPLAQAANVNLDIWIESEACPLDLAPTSSTTASLVMGDALTVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            FS  DF   HPGG LG    +  SDVMH+GD +P +     L + +++++ K FG  AV
Sbjct: 177 GFSAEDFAFRHPGGTLGRKLLLRVSDVMHAGDQVPKIHRAASLGETLSMMTAKGFGMTAV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +D+  KL GI T+GD+ R   K +N  +  V DVM  NP+ +    L   A+ L+  + I
Sbjct: 237 MDDSDKLVGIFTDGDLRRCVDKGINIGSAIVGDVMTPNPRTVQSRMLAAQALNLMETNKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V D+ QKA+G++H  DLLR G++
Sbjct: 297 TALIVEDENQKAVGVLHMHDLLRAGLV 323


>gi|163745219|ref|ZP_02152579.1| arabinose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
 gi|161382037|gb|EDQ06446.1| arabinose 5-phosphate isomerase [Oceanibulbus indolifex HEL-45]
          Length = 322

 Score =  345 bits (886), Expect = 5e-93,   Method: Composition-based stats.
 Identities = 146/326 (44%), Positives = 206/326 (63%), Gaps = 9/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E   L  L  SL       F  AV+ ++A KGR+++TGIGKSGHI
Sbjct: 1   MNTPFLDTARRVIRCESDALIQLADSLDDR----FRGAVDLMRACKGRIIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTP+ FVH AEASHGDLGMIT  D+++ +S SG + EL  ++ Y+RR++
Sbjct: 57  GNKIAATLASTGTPAQFVHPAEASHGDLGMITAADVVLAISNSGEAPELANLIAYSRRYA 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS   S +  H+D+VL LP+  E+C  G+ PTTS  + LA+GDA+A+AL+E+R 
Sbjct: 117 IPLIGITSRPDSSLGRHSDVVLELPRIAEACGTGVVPTTSTTLTLAMGDAVAVALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH GD++PLV    P+ DA++ +S K FG V VV+
Sbjct: 177 FTAEHFRDFHPGGKLGARLSRVADLMHVGDALPLVSADAPMADALSEISRKGFGVVCVVN 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   L+GIIT GD+ R+    L T++  +VM   P  I  D L   A+ ++    I+ L+
Sbjct: 237 DAGTLEGIITMGDLARHLD-GLMTMTAREVMTPAPVTISPDELAEKAVGVMNNRKITCLI 295

Query: 319 VVD----DCQKAIGIVHFLDLLRFGI 340
           V D    D +  +G++H  D LR G+
Sbjct: 296 VTDPAQNDGKSPVGLLHIHDCLRVGL 321


>gi|95928728|ref|ZP_01311474.1| KpsF/GutQ family protein [Desulfuromonas acetoxidans DSM 684]
 gi|95135073|gb|EAT16726.1| KpsF/GutQ family protein [Desulfuromonas acetoxidans DSM 684]
          Length = 325

 Score =  345 bits (886), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 132/327 (40%), Positives = 200/327 (61%), Gaps = 10/327 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            NS +  A  ++  E   + +L   + GE    F  AVE I A KGR+VI+G+GKSG I 
Sbjct: 4   TNSIIDVARNTLKIEADAVLALHDRINGE----FCQAVELILACKGRLVISGMGKSGLIC 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+AST+ASTGTP+ F+H AE  HGDLGM+ + D+++ +S SG ++E+  IL   +R  +
Sbjct: 60  QKIASTMASTGTPALFLHPAEGIHGDLGMLMKGDVVLAVSNSGETEEIVRILPVIKRLGL 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA++    S +A   D+ L +  + E+CP GLAPT S    LA+GDALA+ALL+ +NF
Sbjct: 120 KLIAMSGNPASTLARAGDVSLDISVDKEACPLGLAPTASTTATLAMGDALAVALLQEKNF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF + HPGG LG  L +   D+MH+GD+IPLV     + DA+  ++ K+ G   VVD
Sbjct: 180 QAEDFALFHPGGALGKRLLLRVEDLMHTGDAIPLVAQTTTVKDALFEITNKKLGITGVVD 239

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L G+ T+GD+ R    D ++L   ++ VM ++PK +L   L   A+QL+ +++I+ 
Sbjct: 240 ADNGLVGVFTDGDLRRCLE-DQHSLEHLMDQVMSRHPKRVLRFNLAAKALQLMEEYSITS 298

Query: 317 LMVV--DDCQKAIGIVHFLDLLRFGII 341
           L V   ++    +GI+H  DLL+ G++
Sbjct: 299 LFVFEHEEDATPVGIIHLHDLLKAGVV 325


>gi|258541779|ref|YP_003187212.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256632857|dbj|BAH98832.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256635914|dbj|BAI01883.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256638969|dbj|BAI04931.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642023|dbj|BAI07978.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645078|dbj|BAI11026.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648133|dbj|BAI14074.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651186|dbj|BAI17120.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654177|dbj|BAI20104.1| arabinose-5-phosphate isomerase KpsF/GutQ [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 337

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 144/318 (45%), Positives = 198/318 (62%), Gaps = 4/318 (1%)

Query: 27  ALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           A   +  E+ GL +L  +L+    L   F  A+E I A+ GRVV+TGIGKSGHI  K+ +
Sbjct: 19  AADVVRTERAGLDALAEALENPVGLGGAFAEAIEIILALPGRVVVTGIGKSGHIARKVQA 78

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+ + D ++  S SG + EL  I  +ARR  +PL+A+
Sbjct: 79  TLASTGTPAIFVHPAEASHGDLGMVQKGDAVLAFSNSGETTELGDIAAHARRTGLPLLAV 138

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  A + LTLP  PESCP GLAPTTS + QLA GDALA+ALL  R F+  DF
Sbjct: 139 TSRAHSTLASAATVALTLPSLPESCPMGLAPTTSTLTQLAFGDALAVALLRQRGFTATDF 198

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG       ++M + +++PL     P+ D I  ++ K  GCVA++ E   L 
Sbjct: 199 GTYHPGGRLGARLRTVRELMRTDNAMPLATPNTPMRDVIVEMTHKALGCVAILGENGTLA 258

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--ISVLMVVDD 322
           G+IT+GD+ R    DL T   +DVM  +P  I      + A++L+ +    I+ L V+DD
Sbjct: 259 GLITDGDLRRALDHDLTTTLAKDVMNDSPLTIGPGIFASEALRLMNERKRPITSLFVLDD 318

Query: 323 CQKAIGIVHFLDLLRFGI 340
            +K +G+VH  DL+R G+
Sbjct: 319 ERKPLGVVHVHDLIRAGV 336


>gi|300113016|ref|YP_003759591.1| KpsF/GutQ family protein [Nitrosococcus watsonii C-113]
 gi|299538953|gb|ADJ27270.1| KpsF/GutQ family protein [Nitrosococcus watsonii C-113]
          Length = 330

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 197/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +Q     I  E R +++L + +       F  A + + A +GR+VI G+GKSGHIG 
Sbjct: 11  KRLLQLGAAVIDTEARAVAALRTRIN----ENFAAACKYMLACEGRIVILGMGKSGHIGG 66

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH  EASHGDLGMIT  D+++ LS SG ++E+  IL   +R S+P
Sbjct: 67  KIAATLASTGTPAFFVHPGEASHGDLGMITEKDVVLALSNSGETEEICTILPLIKRLSVP 126

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T + +S +   AD+ + +  E E+CP GLAPT S+   L +GDALAIALLESR F+
Sbjct: 127 LIALTGQPQSTLGRVADVHIDISVEKEACPLGLAPTASSTATLVMGDALAIALLESRGFT 186

Query: 201 ENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HP G     L +  SD+MH G+ IP +     L  A+  ++ K  G  AVV+ 
Sbjct: 187 AEDFARSHPGGRLGRRLLLRISDIMHKGEEIPAILENVLLSAALLEMTRKGLGMTAVVNA 246

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                GI T+GD+ R   +  D++   + ++M  N K +  + L   A+Q+++++ I+ L
Sbjct: 247 QNHAVGIFTDGDLRRALDQGIDVHATPITEIMTANCKTLGPNLLAAEALQIMQRYRINAL 306

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD  Q+ IG ++  DLLR G++
Sbjct: 307 LVVDTEQRLIGALNMHDLLRAGVL 330


>gi|262273847|ref|ZP_06051660.1| arabinose 5-phosphate isomerase [Grimontia hollisae CIP 101886]
 gi|262222262|gb|EEY73574.1| arabinose 5-phosphate isomerase [Grimontia hollisae CIP 101886]
          Length = 322

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 195/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q  + ++  E+  ++ LE  +  +    F  A + I   +G+VV+ G+GKSGHIG+K+A+
Sbjct: 8   QAGITTLKTERDAITQLEQYINED----FVTACQLILNAQGKVVVMGMGKSGHIGNKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMI + D+++ +S SG + E+  +L   +R  I LI +
Sbjct: 64  TLASTGTPSFFVHPGEASHGDLGMIEKGDVVLAISNSGEASEIITLLPVVKRRGITLITM 123

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   S +A  A + L +    E+CP GLAPT+S    L +GDALA+AL++++ F+ +DF
Sbjct: 124 TSNPASTMARLAQVNLCIKVPKEACPIGLAPTSSTTATLVMGDALAVALMQAKGFTADDF 183

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +DVMHSGD +P V     + DA+  +S K  G  AVVD    +
Sbjct: 184 ALSHPGGALGRKLLLRIADVMHSGDKLPKVLPHHTIRDALLEMSAKGLGMTAVVDSQDSV 243

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   +  D+++  +  VM KNP  I  D L    ++L+ +  I+ L+V D
Sbjct: 244 LGIFTDGDLRRLLDQRIDVHSTDIGAVMGKNPTCISADMLAAEGLKLMEEKKINGLLVTD 303

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +    IG ++  DLL+ G++
Sbjct: 304 ND-TLIGALNMHDLLKAGVM 322


>gi|148252917|ref|YP_001237502.1| arabinose 5-phosphate isomerase [Bradyrhizobium sp. BTAi1]
 gi|146405090|gb|ABQ33596.1| Arabinose 5-phosphate isomerase [Bradyrhizobium sp. BTAi1]
          Length = 333

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 158/333 (47%), Positives = 222/333 (66%), Gaps = 1/333 (0%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
                    +   N+ +Q ALR++ A   G++++ ++L G L   F  AV  I+  KGR 
Sbjct: 1   MPRSKPLTEAPPANADIQSALRTLDAGSNGIAAISAALHGPLGAAFAAAVALIRQAKGRA 60

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           ++TG+GKSGH+  K+A+TLASTGTP+FFVH+AEA HGDLGMIT DD++I LSWSG   E+
Sbjct: 61  ILTGLGKSGHVARKMAATLASTGTPAFFVHSAEAGHGDLGMITSDDVVIALSWSGEQPEM 120

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           K ++ Y +RF+IP+IAITS  +S +   A IVL LPK  E+CPH LAPTTS +MQ AIGD
Sbjct: 121 KTLVNYTKRFAIPMIAITSNAQSSLGQAARIVLELPKAREACPHNLAPTTSTLMQAAIGD 180

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALAIALLE R F+  +F   HPGGKLG +    SD+M SGD++PL  +G  + DA+  +S
Sbjct: 181 ALAIALLEGRGFTALEFANFHPGGKLGAMLKHISDLMRSGDAVPLKPLGTGMADALAEMS 240

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            K  GCV +VD    + GIIT+GD+ R    DL +++V+++M  NP+ +  + L + A++
Sbjct: 241 AKGLGCVVIVDGRGHVAGIITDGDLRRKMRADLLSVTVDEIMTANPRTVGREALASEALE 300

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L    I+ L+V D   K +GI+H  DLLR G+
Sbjct: 301 ILNSAKITTLIVTDGA-KPVGILHMHDLLRAGV 332


>gi|260770983|ref|ZP_05879912.1| arabinose 5-phosphate isomerase [Vibrio furnissii CIP 102972]
 gi|260614220|gb|EEX39410.1| arabinose 5-phosphate isomerase [Vibrio furnissii CIP 102972]
          Length = 324

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 189/319 (59%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-AIKGRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  L+     +    F  A E I     G+VV+ GIGKSGHIG K+A+T
Sbjct: 11  AQQVLATEIEALQQLDQYFNDD----FCRACEMILANNSGKVVVMGIGKSGHIGRKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI   D+++ +S SG S E+ A+    +R +  +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIESGDIVLAISNSGESSEILALFPVLKRLNNRIISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 127 GNLHSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +   D+MHSG+ +P V     + DA+  +S+K  G  AVV E   L 
Sbjct: 187 LSHPGGALGRKLLMKLHDIMHSGEELPKVSPDALVRDALLEISQKGLGMTAVVAEDDHLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T S+ DVM  NP V   + L    + L+++  I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHTASIRDVMTCNPTVASPNILAVEGLNLMQEKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 DGKLVGALNMHDLLKAGVM 324


>gi|149910598|ref|ZP_01899236.1| hypothetical sugar phosphate isomerase [Moritella sp. PE36]
 gi|149806326|gb|EDM66301.1| hypothetical sugar phosphate isomerase [Moritella sp. PE36]
          Length = 323

 Score =  345 bits (885), Expect = 6e-93,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 199/320 (62%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q AL  I  E   +S L   +       F    E + A KG+V++TG+GKSGHI +K+A+
Sbjct: 9   QSALNVINTEAAAISQLSQYIDAT----FTATCELLIARKGKVIVTGMGKSGHIANKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH AEASHGDLGMI R D+++ LS SG SDE+ A+    +R SIP+IA+
Sbjct: 65  TLASTGTPAFFVHPAEASHGDLGMIERGDVVMALSNSGESDEILALYPVLKRLSIPIIAM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A I L +  + E+CP GLAPT+S    L +GDA+A+ALLE++ F+ NDF
Sbjct: 125 TGNADSTMAREAKISLCIKVDKEACPLGLAPTSSTTASLVMGDAIAVALLEAKGFTANDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG+LG    +  SD+MH GD +P V+    + +A+  +S+K  G  AV + G++L
Sbjct: 185 ALSHPGGRLGRKLLLRISDIMHKGDGVPSVQQSETISEALFEVSKKGLGMTAV-NNGKRL 243

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R      D++   + +VM +    I E  L   A+ ++    ++ L+VV+
Sbjct: 244 VGIFTDGDLRRILDARIDIHQTPISEVMTRRCVTINEHILAAEALAVMENKKVNGLIVVN 303

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + Q+ +G  +  DLLR G++
Sbjct: 304 EQQEPVGAFNMHDLLRAGVL 323


>gi|309378636|emb|CBX22707.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 324

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 136/323 (42%), Positives = 201/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +    GRVVITG+GKSGH+G K
Sbjct: 6   KYLDWAREVLHTEAEGL----REIAADLDENFARAADALLHCTGRVVITGMGKSGHVGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 62  IAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPGSTMARYADIHITASVSQEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDAQ 241

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +   L  L VE++M   PK I  + L   A+++++ ++I+ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKVMQANHINGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLAARIV 324


>gi|167585440|ref|ZP_02377828.1| KpsF/GutQ family protein [Burkholderia ubonensis Bu]
          Length = 327

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +    GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALSDQLDGD----FVKAVALLLGCGGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGQLADVNLNAAVAKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM +GD IP V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRTGDEIPSVGLDATLSDALFQITAKRLGMTAVVDA 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G K+ GI T+GD+ R   +  D   L + DVM + P+ I  D L   A++L+ +H I+ +
Sbjct: 244 GGKVAGIFTDGDLRRVLERDGDFRRLPIADVMTRQPRTIGPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGALIGALNMHDLFSKKVI 327


>gi|170728560|ref|YP_001762586.1| KpsF/GutQ family protein [Shewanella woodyi ATCC 51908]
 gi|169813907|gb|ACA88491.1| KpsF/GutQ family protein [Shewanella woodyi ATCC 51908]
          Length = 325

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     I  E+  L +L   +    S +F  A + I    G+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGRTVIDIERNALDNLYQYVD---SEEFTQACKLILNCTGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGDLG+++ +D+I+ +S SG + E+  ++   +R  +P+IA 
Sbjct: 66  TLASTGTPAFFVHPGEASHGDLGVLSENDIILAISNSGEASEILTLMPVIKRMGLPVIAC 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  + + L +    E+CP GLAPT+S    L +GDALA+ALL++R F+++DF
Sbjct: 126 TGNPDSNMAKLSVVHLCIEVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTKDDF 185

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SDVMH G  +P V     + +A+  +S+K  G  AVVDE  KL
Sbjct: 186 ALSHPGGSLGRKLLLKVSDVMHKGKDLPSVNHDICITEALYEISKKSLGMTAVVDEANKL 245

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R      +L T S+ DVM K    +  D L   A++++   +I+ L+V+D
Sbjct: 246 VGIFTDGDLRRVIDSEVNLRTTSISDVMSKGCVTVSADILAAAALKVMEDKDINGLIVID 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D Q  IG ++ LD+++ G+I
Sbjct: 306 DQQHPIGALNMLDMVKAGVI 325


>gi|331005041|ref|ZP_08328445.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC1989]
 gi|330421096|gb|EGG95358.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC1989]
          Length = 331

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 208/333 (62%), Gaps = 7/333 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T     + K   +    R++  E   ++ L + +       FH A E IK  KG+VV+TG
Sbjct: 3   TAPTPQVKKMDHIAIGKRTVQMELEAIADLSARIDQT----FHDACELIKQCKGKVVVTG 58

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+TLASTGTP+FF+H  EASHGDLGMI+ +D +I +S SG+S E+ A++
Sbjct: 59  MGKSGHIGKKIAATLASTGTPAFFIHPGEASHGDLGMISTNDAVIAISNSGNSAEIIALI 118

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               R   PLI++T    S +A  AD+ L +    E+CP  LAPT+S  + L +GDALA+
Sbjct: 119 PLLHRLKTPLISMTGNTTSSLAIAADVNLDVSVTCEACPLDLAPTSSTTVTLVMGDALAV 178

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALLE++ FS  DF   HPGG LG  L +  SDVMH+GD IP V +   L  A+  +++K 
Sbjct: 179 ALLEAKGFSAEDFAFSHPGGALGKRLLLKVSDVMHTGDKIPSVSLQASLSQALLEMTQKG 238

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G   +VD+ ++L GI T+GD+ R   +  D+  + ++D+M  +P  I E+TL   A+ +
Sbjct: 239 LGMTTIVDDEKRLMGIFTDGDLRRTIDQGLDIRVIQIQDIMNTSPNTIGENTLAAEALGI 298

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + + +I+ L++ D  Q+A+G+VH  D+LR GI+
Sbjct: 299 MEEKSITSLVISDSQQRAVGVVHLHDILRSGIL 331


>gi|313667758|ref|YP_004048042.1| sugar isomerase, kpsf/gutq family [Neisseria lactamica ST-640]
 gi|313005220|emb|CBN86653.1| sugar isomerase, kpsf/gutq family [Neisseria lactamica 020-06]
          Length = 324

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 136/323 (42%), Positives = 201/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +    GRVVITG+GKSGH+G K
Sbjct: 6   KYLDWAREVLHTEAEGL----REIAADLDENFARAADALLHCTGRVVITGMGKSGHVGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 62  IAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIIPALKRKNITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A +ADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPGSTMARYADIHITASVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDAQ 241

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +   L  L VE++M   PK I  + L   A+++++ ++I+ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQRRDSLAGLQVEEMMHTQPKTISAERLAAEALKVMQANHINGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLAARIV 324


>gi|161870717|ref|YP_001599890.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis 053442]
 gi|161596270|gb|ABX73930.1| sugar isomerase, KpsF/GutQ family [Neisseria meningitidis 053442]
          Length = 324

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 139/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   KYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 62  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLAARIV 324


>gi|134296982|ref|YP_001120717.1| KpsF/GutQ family protein [Burkholderia vietnamiensis G4]
 gi|134140139|gb|ABO55882.1| KpsF/GutQ family protein [Burkholderia vietnamiensis G4]
          Length = 327

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDGD----FVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGKLADVHLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG        DVM SG  +P V +   L DA+  ++EKR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTHVRDVMRSGADVPRVGLDATLSDALFQITEKRLGMTAVVDP 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D  TL + DVM + P+ I  D L   A++L+ +H I+ +
Sbjct: 244 DGRVAGIFTDGDLRRVLARDGDFRTLPIVDVMTRAPRTIGPDQLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDTNGMLIGALNMHDLFSKKVI 327


>gi|254509092|ref|ZP_05121194.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus 16]
 gi|219547973|gb|EED24996.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus 16]
          Length = 329

 Score =  345 bits (885), Expect = 7e-93,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 199/320 (62%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+     E    F  A E I + K G+VV+ G+GKSGH+G+K+A+
Sbjct: 15  AALDVLKTEIEALEQLDQYFNDE----FIQACELILSNKEGKVVVMGMGKSGHVGNKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EA+HGDLGMI   D+++ +S SG S E+  +    +R +I +I++
Sbjct: 71  TLASTGTPSFFVHPGEAAHGDLGMIKPGDIVLAISNSGESSEILGLFPVLKRLNIKIISM 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  +D+ L +    E+CP  LAPT+S    + +GDALA+AL+++R F+  DF
Sbjct: 131 TGKPHSNMAKLSDLHLQITVPKEACPIQLAPTSSTTATIVMGDALAMALMQARGFTAEDF 190

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MHSG+++PLVK    + +A+  +S+K  G  AVVD+ Q+L
Sbjct: 191 ALSHPGGALGRKLLLKLADIMHSGENLPLVKPTALVREALLEISQKGLGMTAVVDDHQQL 250

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T S+ DVM  NP V   + L    + L++  +I+ L++ D
Sbjct: 251 LGIFTDGDLRRILDKRVDIHTASIGDVMTANPTVASPNMLAAEGLNLMQAKSINGLILCD 310

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  D+L+ G++
Sbjct: 311 -QGKVVGALNMHDMLKAGVM 329


>gi|311277830|ref|YP_003940061.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
 gi|308747025|gb|ADO46777.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
          Length = 328

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  L  +  E+ GL+ L+  +  +    F  A E++    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  KAGLEVLEIEREGLAQLDQYINQD----FALACERMFKCGGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I LS SG S+E+ A++   +R  +PLI +
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTAQDVVIALSNSGESNEILALIPVLKRLQVPLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  ADI L +  + E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRADSSMAKAADIHLCVKVQKEACPLGLAPTSSTTAALVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPRVNKAASLRDALLEITRKNLGMTVICDDQMTI 249

Query: 264 KGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R F    D+ +LS+ DVM      +   TL    + L++  +I+ +MV D
Sbjct: 250 DGIFTDGDLRRVFDMGADVRSLSIADVMTHGGIRVRSGTLAVDVLNLMQSRHITCVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  DLLR G++
Sbjct: 310 GD-HLLGVVHMHDLLRAGVV 328


>gi|296840823|ref|ZP_06863527.2| arabinose 5-phosphate isomerase [Neisseria polysaccharea ATCC
           43768]
 gi|296839819|gb|EFH23757.1| arabinose 5-phosphate isomerase [Neisseria polysaccharea ATCC
           43768]
          Length = 351

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 138/333 (41%), Positives = 210/333 (63%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   + AE  GL      +  EL   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAENGKYLDWAREVLHAEAEGL----REIAAELDKNFVLAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGH+G K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 79  MGKSGHVGRKIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R +I L+ IT+   S +A +ADI +T     E+CP GLAPT+S    +A+GDALA+
Sbjct: 139 PALKRKNITLVCITARPGSTMARYADIHITASVSQEACPLGLAPTSSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D   +LKG+ T+GD+ R F +  +   LS+++VM   PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQCRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTQPKTISAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D      G ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLTGALNMHDLLAARIV 351


>gi|323144369|ref|ZP_08078977.1| arabinose 5-phosphate isomerase [Succinatimonas hippei YIT 12066]
 gi|322415822|gb|EFY06548.1| arabinose 5-phosphate isomerase [Succinatimonas hippei YIT 12066]
          Length = 322

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 141/326 (43%), Positives = 203/326 (62%), Gaps = 6/326 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++K + +    R +  E   L +L  ++       F  A   + + KG+V++TG+GKSGH
Sbjct: 1   MIKETCISAGKRVLQDEAAALLALVPTI----GDNFEKACRLLLSCKGKVILTGVGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ASTLASTGTP+FFV A EA+HGDLGMI  DD++I +S SG   ELK ++   +R 
Sbjct: 57  IATKIASTLASTGTPAFFVQAGEAAHGDLGMIGNDDVVIAISNSGEGSELKIMIPILKRR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLIAIT E  S +   ADI L+   E E+CP  LAPT+S+  +LA+GDALAIALLE+R
Sbjct: 117 GIPLIAITGEINSSLGKEADITLSAHVEKEACPLNLAPTSSSTAELALGDALAIALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+E DF + HPGG LG    V   D+MH+G ++P VK    + DA+  +S+K  G V +
Sbjct: 177 GFTEQDFALSHPGGALGRRLLVRCKDLMHTGSAMPKVKDDISIKDALFEMSKKSQGIVTI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VD+  KL G+ T+GD+ R  +K ++    +  VM +    I  +TL   A+ L++   I+
Sbjct: 237 VDKDGKLAGVYTDGDLRRTLNKGVDLNECISLVMTRKCTTIKAETLAAKAVVLMQSKKIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++VVD+  K IG  +  DLLR GI+
Sbjct: 297 AMVVVDENNKPIGTFNIQDLLRAGIV 322


>gi|291532169|emb|CBL05282.1| KpsF/GutQ family protein [Megamonas hypermegale ART12/1]
          Length = 323

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 135/324 (41%), Positives = 201/324 (62%), Gaps = 11/324 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A+ ++  E   +  L + +  E    F   V  I A  GRV++TG+GKSGH+G K+A+
Sbjct: 4   EKAIETLQIEADAVKKLINHIDDE----FETIVNAILACNGRVIVTGMGKSGHVGRKIAA 59

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           +LASTGTPSFF+H AEA HGDLGM+T +D+++ +S SG S+E+  IL   +R    +IA+
Sbjct: 60  SLASTGTPSFFMHPAEAFHGDLGMVTANDMVLAISNSGESNEIVNILPIIKRIGAKIIAM 119

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +   +S +  +AD  + +  E E+CP GLAPT S    LA+GDALAIALL SRNF+  DF
Sbjct: 120 SGRRESTLGKNADYYIDISVEREACPLGLAPTASTTATLAMGDALAIALLSSRNFTAQDF 179

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            V HPGG LG    +   +VMHSG+  P++ +     +A+ +++ K  G  +VVDE  K 
Sbjct: 180 AVFHPGGALGRRLLLTVENVMHSGEDNPVISVHKTAKEALFLMTAKGLGATSVVDENGKF 239

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
            G++T+GDI R   +        VED+M KNP +I +D +   A+ ++ +H    I+VL 
Sbjct: 240 IGLVTDGDIRRMLARGAEFLDEPVEDLMTKNPVIITKDKMAAEALSMMEKHQPKPITVLP 299

Query: 319 VVD-DCQKAIGIVHFLDLLRFGII 341
           V+D +  + +GIVH  DLLR G++
Sbjct: 300 VIDVEKNEPVGIVHLTDLLRQGVV 323


>gi|285018899|ref|YP_003376610.1| sugar phosphate isomerase involved in capsule formation, kpsf/gutq
           protein [Xanthomonas albilineans GPE PC73]
 gi|283474117|emb|CBA16618.1| putative sugar phosphate isomerase involved in capsule formation,
           kpsf/gutq protein [Xanthomonas albilineans]
          Length = 333

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 128/323 (39%), Positives = 194/323 (60%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +    R +  E+  L+++ + +    +         I A +GRVV TG+GKSGH+  K
Sbjct: 15  ALIASGRRVVEIEQAALAAVGARIGAAFAAA----CRLILASRGRVVATGMGKSGHVARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE+  +L   +R    +
Sbjct: 71  IAATLASTGTPAFFVHPGEAGHGDLGMITDADVVLALSYSGESDEILMLLPVLKRQGNAV 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T   +S +A  AD+ L +    E+CP  LAPT+S    LA+GDALA+ALL++R F+ 
Sbjct: 131 IAMTGRAQSTLAREADLHLDISVPAEACPLDLAPTSSTTASLALGDALAVALLDARGFTA 190

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG    +  +DVMHSG+ +P V+    + +A+  +S KR G  AVVD  
Sbjct: 191 DDFARSHPAGSLGRRLLLHITDVMHSGEELPKVREDASVSEALVEMSRKRLGMTAVVDAD 250

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L G+ T+GD+ R      ++    + +VM + P+ I  D L   A +L+  H I+ L+
Sbjct: 251 DRLLGLFTDGDLRRTLDSALNVRQTRIAEVMTRQPRTIGADQLAAEAARLMETHQINGLI 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   +A+G ++  DLLR  ++
Sbjct: 311 VVDAAGRAVGALNIHDLLRARVV 333


>gi|262166552|ref|ZP_06034289.1| arabinose 5-phosphate isomerase [Vibrio mimicus VM223]
 gi|262026268|gb|EEY44936.1| arabinose 5-phosphate isomerase [Vibrio mimicus VM223]
          Length = 324

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 134/319 (42%), Positives = 197/319 (61%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLRTEIAALQQLEQYINAD----FASACATILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGLGMTAVVDEQDTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ DVM ++P V   + L    + L++   I+ LM+VDD
Sbjct: 247 GIFTDGDLRRILDKRIDIHTTAIADVMTRHPTVAHPNLLAVEGLNLMQAKRINGLMLVDD 306

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 307 -NKLVGALNMHDLLKAGVM 324


>gi|218768872|ref|YP_002343384.1| hypothetical protein NMA2135 [Neisseria meningitidis Z2491]
 gi|121052880|emb|CAM09232.1| conserved hypothetical protein [Neisseria meningitidis Z2491]
          Length = 324

 Score =  344 bits (884), Expect = 8e-93,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 204/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 4   NEKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I
Sbjct: 60  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 120 TLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D
Sbjct: 180 TPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 240 GQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNG 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D     IG ++  DLL   I+
Sbjct: 300 LLVTDADGVLIGALNMHDLLAARIV 324


>gi|163742521|ref|ZP_02149907.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
 gi|161384106|gb|EDQ08489.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis 2.10]
          Length = 323

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 194/323 (60%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A + I  E R L +L   L       F  AV+ +   +GRV+++GIGKSGHIG 
Sbjct: 5   ETFLATARQVITDEARALDALADGLDAR----FAEAVDLVLQAEGRVIVSGIGKSGHIGH 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IP
Sbjct: 61  KIAATLASTGTPAYFVHPAEASHGDLGMLSKGDVVLAISNSGEAPELANLLSFTRRFGIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++S   S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F 
Sbjct: 121 LIGLSSRMDSTLMKEADVHLQIPALGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFR 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG       D+MH G ++PLV    P+ DA+  +S+K FG   V    
Sbjct: 181 PENFRAFHPGGKLGARLSKVDDLMHDGTALPLVGADTPMSDALIEISQKGFGVAGVTGAN 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L+GIIT+GD+ R+    L   +  DVM  +P  I   +L   A+ ++    I+ L VV
Sbjct: 241 GTLQGIITDGDLRRHMD-GLLDKTAADVMTSSPTTIAPGSLAEEAVAIMNDRKITCLFVV 299

Query: 321 DDCQ---KAIGIVHFLDLLRFGI 340
           D      +A+G++H  D LR G+
Sbjct: 300 DPEGDTAQAVGLLHIHDCLRVGL 322


>gi|300718608|ref|YP_003743411.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299064444|emb|CAX61564.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 328

 Score =  344 bits (884), Expect = 9e-93,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 194/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E++GL  L+  +  +    F  A ++I +  G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKDVLNIERQGLEQLDQYINDD----FTQACQRIFSCSGKVVVMGMGKSGHIGKKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH AEASHGDLGM++  D++I +S SG S E+ A++   +R  + LI +
Sbjct: 70  TFASTGTPAFFVHPAEASHGDLGMVSAGDIVIAISNSGESSEILALIPVLKRLHVSLICM 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS+ +S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF
Sbjct: 130 TSKPESAMGRAADIHLCVKVPQEACPLGLAPTTSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP V     L DA+  ++ K  G   + ++  K+
Sbjct: 190 ALSHPGGALGRKLLLTVNDIMHTGDEIPHVSREASLRDALLEITRKNMGMTVICNDLMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T+GD+ R F    D  T  +  VM      +  + L   A+ L++  NI+V+MV D
Sbjct: 250 EGIFTDGDLRRVFDMGIDFQTADIASVMTSGGIRVRPNLLAVDALNLMQSRNITVVMVAD 309

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G+VH  D+LR G++
Sbjct: 310 GD-TLLGVVHMHDMLRAGVV 328


>gi|84514851|ref|ZP_01002214.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
 gi|84511010|gb|EAQ07464.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
          Length = 322

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 137/320 (42%), Positives = 200/320 (62%), Gaps = 7/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R I+ E   L++L ++L       F  AV  +   KGRV+++G+GKSGHI  K+A
Sbjct: 8   LATARRVILQEADALTALSATL----DANFADAVTLLLNAKGRVIVSGMGKSGHIARKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF IP+I 
Sbjct: 64  ATFASTGTPAHFVHPAEASHGDLGMMTRGDVVLVLSNSGETPELADLVAYTRRFGIPMIG 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + S  +S +   AD+ +TLP+  E+C  G+ PT S  M LA+GDALAIAL+E R F+  +
Sbjct: 124 VASRAESTLIQQADVGITLPQLGEACGRGIVPTISTTMTLALGDALAIALMEHRAFTPEN 183

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGGKLG      +D+MH  D+IPLV++  P+ D + ++++K FG  AV+ E  +L
Sbjct: 184 FRDFHPGGKLGAQLSKVADLMHRDDAIPLVRVDTPMSDVLLVITQKGFGVAAVLGEDDRL 243

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-- 321
            GI+T+GD+ R+  + L   +  +VM  NP  +    L   A+ ++    I+ L  +D  
Sbjct: 244 VGIVTDGDLRRHM-QGLLDHTAGEVMTANPTTVSPHALAEEAVNIMNSRKITCLFALDPA 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K  GI+H  D LR GI+
Sbjct: 303 NPGKVTGILHIHDCLRAGIV 322


>gi|186475100|ref|YP_001856570.1| KpsF/GutQ family protein [Burkholderia phymatum STM815]
 gi|184191559|gb|ACC69524.1| KpsF/GutQ family protein [Burkholderia phymatum STM815]
          Length = 346

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 143/324 (44%), Positives = 196/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + SL   L       F  A++ I   +GRVV++GIGKSGHI  
Sbjct: 27  DRALALARDVLDIEADAVRSLRDHL----DDAFVEAIDFILGCRGRVVVSGIGKSGHIAR 82

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S SG S+EL AIL   +R    
Sbjct: 83  KLAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGMSNSGESEELVAILPLVKRLGAK 142

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T    S +A  AD+ L    E E+CPH LAPT S    LA+GDALA+A+LE+R F 
Sbjct: 143 MIAMTGRPGSSLAKIADVHLYCGVEKEACPHNLAPTASTTAALALGDALAVAVLEARGFG 202

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG   +    DVM +GD IP V     + DA+  L+ KR G  A+VDE
Sbjct: 203 ADDFARSHPGGALGRRLLTYVRDVMRTGDQIPKVLSDATVRDALFQLTAKRMGMTAIVDE 262

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +++KGI T+GD+ R   +  D   L+++ VM   P+ I  D L   A++L+ +H I+ +
Sbjct: 263 NERVKGIFTDGDLRRVLERDGDFRALTIDSVMTHGPRTIGSDRLAVEAVELMERHRINQM 322

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+  K IG ++  DL    +I
Sbjct: 323 LVVDEAGKLIGALNMHDLFSKKVI 346


>gi|49473832|ref|YP_031874.1| polysialic acid capsule expression protein [Bartonella quintana
           str. Toulouse]
 gi|49239335|emb|CAF25668.1| Polysialic acid capsule expression protein [Bartonella quintana
           str. Toulouse]
          Length = 331

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 175/319 (54%), Positives = 230/319 (72%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S V  AL+++ +EK+GL +LE++L G LS  F  AV+ IK   G VVITG+GKSGHIG+
Sbjct: 12  QSAVTSALKTLASEKQGLEALEAALLGNLSSSFEVAVQTIKNANGHVVITGLGKSGHIGT 71

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVHAAEA+HGDLGMI  DD+I+ LSWSG + EL  I+ +A RF  P
Sbjct: 72  KIAATLASTGTPAFFVHAAEANHGDLGMIGSDDVILALSWSGETLELSGIINHAARFRTP 131

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+TS   SV+A  ADIVL LPK  E+CPHGLAPTTS ++QLA+GDALA+ALLE R F+
Sbjct: 132 LIAMTSGEHSVLARQADIVLLLPKIEEACPHGLAPTTSTVVQLAMGDALAVALLEMRGFT 191

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF + HPGG LG       D+MH GDSIPLV  G  + +A+ +L  K FGCV VV++ 
Sbjct: 192 ATDFKIYHPGGSLGAHLKYVRDIMHVGDSIPLVVQGTTMTEAMNVLVAKHFGCVGVVNQR 251

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GI+T+GD+ RN H +L+  +V++VM K+PK++  +TL+  A   +  H+I    VV
Sbjct: 252 GELIGIVTDGDLARNIHFNLSKFNVDEVMTKDPKIVEPNTLVGAATAFINDHHIGAFFVV 311

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            + +K +GIVHF DLLR G
Sbjct: 312 -EDKKPLGIVHFHDLLRIG 329


>gi|319786676|ref|YP_004146151.1| KpsF/GutQ family protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317465188|gb|ADV26920.1| KpsF/GutQ family protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 331

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 186/319 (58%), Gaps = 7/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              R    E + L ++ + +       F  A   I A  GR+V TG+GKSGH+  K+A+T
Sbjct: 17  AGRRVFQVEAQALEAVGARI----GEAFASACSLILASPGRLVCTGMGKSGHVARKIAAT 72

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG SDE+  +L   RR    +IA+T
Sbjct: 73  LASTGTPAFFVHPGEAGHGDLGMITDTDIVLALSYSGESDEVLMLLPALRRQGNKVIAMT 132

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    LA+GDALA+ALLE+R F+ +DF 
Sbjct: 133 GREHSTLAREADIHLDVNVPAEACPLHLAPTSSTTASLAMGDALAVALLEARGFTADDFA 192

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG    +  +DVMH G+ +P V     + +A+  +S KR G  A+      L 
Sbjct: 193 RSHPAGSLGRRLLLHVTDVMHGGEELPCVGEEASVAEALVEMSRKRLGMTAIAAADGTLA 252

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   +  D+    + +VM +NP+ I    + T A  L+ QH I+ L+V+D 
Sbjct: 253 GIFTDGDLRRALDRGIDVRQAGIAEVMTRNPRTIDATQMATEAAHLMEQHRINGLVVIDG 312

Query: 323 CQKAIGIVHFLDLLRFGII 341
            ++ +G ++  DLLR  ++
Sbjct: 313 ERRPVGALNVHDLLRARVV 331


>gi|296115074|ref|ZP_06833716.1| KpsF/GutQ family protein [Gluconacetobacter hansenii ATCC 23769]
 gi|295978411|gb|EFG85147.1| KpsF/GutQ family protein [Gluconacetobacter hansenii ATCC 23769]
          Length = 353

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 148/346 (42%), Positives = 201/346 (58%), Gaps = 14/346 (4%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQG------------ELSFQFHCA 56
                   S  +   ++ A + +  E  GL+ +  +L+             +L   F   
Sbjct: 7   PHPNHGPVSTDQTDMIESACKVLQTECDGLARMMDALRQALGPAHEGMGASDLGLAFIRT 66

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +     RVV+TGIGKSGHIG K+ STLASTGTPS FVH AEASHGDLGM+   D I+
Sbjct: 67  VKALSMPARRVVVTGIGKSGHIGRKIQSTLASTGTPSIFVHPAEASHGDLGMLQPGDAIL 126

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            LS SG + EL  I+ +ARRF + LIA+T+   S +A  ADI L LP+ PE+CP GLAPT
Sbjct: 127 ALSNSGETSELADIVSHARRFGLLLIAMTARADSTLARAADIALVLPQTPEACPMGLAPT 186

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           TS+ MQLA+GDALAI LL  R F  +DF + HPGG+LG        +MH G S+PL    
Sbjct: 187 TSSTMQLALGDALAIVLLTQRGFGADDFGIFHPGGRLGAQLRDVRALMHVGPSMPLGSAD 246

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
            PL   I  ++ K FGC+ VV +   L G+IT+GD+ R   +D++     D+M  NP+ I
Sbjct: 247 LPLRQVIMEMTHKAFGCMGVVRDDGTLVGLITDGDLRRALEQDIDGTRAADIMNTNPQTI 306

Query: 297 LEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             D L   A++++      I+ L V+D  +  IGI+H  DLLR G+
Sbjct: 307 RPDVLAVDALRIMNDRPRPITSLFVLDAERHPIGILHIHDLLRAGV 352


>gi|262278508|ref|ZP_06056293.1| sugar phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
 gi|262258859|gb|EEY77592.1| sugar phosphate isomerase [Acinetobacter calcoaceticus RUH2202]
          Length = 325

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 136/319 (42%), Positives = 191/319 (59%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            AL ++  E++ L  L + +       F+ A E +   KGRVVITG+GKSGHIG K+A+T
Sbjct: 10  SALATLRIEQQALDVLATQIND----SFNQACEILLQCKGRVVITGMGKSGHIGRKMAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I+
Sbjct: 66  FASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITIS 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
             +K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF 
Sbjct: 126 RTDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDFA 185

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP G LG  L +    +MH+GD +P V    P+   +  +S KR G   +VD+ + L 
Sbjct: 186 RSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKRLGLTTIVDDEEHLL 245

Query: 265 GIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T+GD+ R   K       L V +VM K P  I ++     A+Q L    IS  +VVD
Sbjct: 246 GIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQQLNLKKISQFVVVD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K IG++   DL++ G+
Sbjct: 306 DQNKVIGVISMHDLIQAGV 324


>gi|238899002|ref|YP_002924684.1| D-arabinose 5-phosphate isomerase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
 gi|229466762|gb|ACQ68536.1| D-arabinose 5-phosphate isomerase [Candidatus Hamiltonella defensa
           5AT (Acyrthosiphon pisum)]
          Length = 325

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 133/327 (40%), Positives = 201/327 (61%), Gaps = 8/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L + +  Q A   +  E  GL+ LE  +  +    F  A   I + +G++VI G+GKSGH
Sbjct: 4   LNQVNYQQIAKAVLKIECAGLAQLEQYINED----FEKACAHIFSCQGKLVIMGMGKSGH 59

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH +EA+HGDLGMI++ D+++ +S SG ++E+ +++   +R 
Sbjct: 60  IGCKIAATFASTGTPAFFVHPSEANHGDLGMISQGDIVLAISNSGEANEILSLIPLLKRQ 119

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I LI +T++  S +   ADI L +    E+CP GLAPTTS    L +GDALA+ALL++R
Sbjct: 120 HIFLICMTADPNSTMGEAADIHLCIKVPQEACPLGLAPTTSTTATLVMGDALAVALLQAR 179

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+E DF   HPGG+LG    +  SD+MH+G  IP V     L D +  +++K+ G  A+
Sbjct: 180 GFTEKDFARSHPGGRLGRKLLLRVSDMMHTGSDIPFVYSNASLRDTLLEMTQKKLGLTAI 239

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D   K++GI T+GD+ R F K  DLN   +  +M  NP  +    L   A+ L++ H+I
Sbjct: 240 CDHNMKIEGIFTDGDLRRVFDKQIDLNKAHINHLMTSNPVQVKPGLLAVEALNLMQLHHI 299

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+V     + +G+VH  D+LR G+I
Sbjct: 300 TALLVSKKS-RLVGVVHMHDMLRSGVI 325


>gi|325128937|gb|EGC51791.1| arabinose 5-phosphate isomerase [Neisseria meningitidis N1568]
          Length = 326

 Score =  344 bits (883), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 139/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|121635512|ref|YP_975757.1| hypothetical protein NMC1816 [Neisseria meningitidis FAM18]
 gi|120867218|emb|CAM10987.1| conserved hypothetical protein [Neisseria meningitidis FAM18]
          Length = 324

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E+ GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   KYLDWAREVLHTEEEGL----REIATELDENFVLAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 62  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLAARIV 324


>gi|78048669|ref|YP_364844.1| sugar phosphate isomerase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
 gi|78037099|emb|CAJ24844.1| sugar phosphate isomerase [Xanthomonas campestris pv. vesicatoria
           str. 85-10]
          Length = 333

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 203/342 (59%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
              S   S T    SL     V    R +  E+  L+S+ + +  E    F  A   + A
Sbjct: 1   MAVSPLPSATVSDASL-----VASGQRVLQIEREALASVGARIGSE----FAAACRLVLA 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +GRVV TG+GKSGH+  K+A+TLASTGTP+FFVH  EA HGDLGMIT  D+++ LS+SG
Sbjct: 52  SRGRVVATGMGKSGHVARKIAATLASTGTPAFFVHPGEAGHGDLGMITEADIVLALSYSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            SDE++ +L   +R   P+IA+T    S +A  AD+ L +    E+CP  LAPT+S    
Sbjct: 112 ESDEVRMLLPVLKRQGNPIIAMTGRTGSTLAQAADVHLDVSVSAEACPLHLAPTSSTTAS 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F+ +DF   HP G LG    +  +DVMH+G+ +P V+    L +
Sbjct: 172 LAMGDALAVALLDARGFTADDFARSHPAGSLGRRLLLHITDVMHAGEDLPRVREDASLSE 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILED 299
           A+  +S KR G  AVVD   +L G+ T+GD+ R    D++  S  +  VM +NP+ I  D
Sbjct: 232 ALMEMSRKRLGMTAVVDADDRLIGLFTDGDLRRALDSDIDVRSAGIAQVMTRNPRTIAAD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +L+  + I+ L+VVD   +A+G ++  DLLR  ++
Sbjct: 292 QLAAEAARLMEDYKINGLIVVDAQHRAVGALNIHDLLRAKVV 333


>gi|294650978|ref|ZP_06728318.1| D-arabinose 5-phosphate isomerase [Acinetobacter haemolyticus ATCC
           19194]
 gi|292823079|gb|EFF81942.1| D-arabinose 5-phosphate isomerase [Acinetobacter haemolyticus ATCC
           19194]
          Length = 325

 Score =  344 bits (882), Expect = 1e-92,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 193/320 (60%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L + +       F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KSALETLRIEQQAIEVLATQVDER----FDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVALTLGAADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VD+   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGAELPKVKPDTPMNKVLYEISDKRLGLTTIVDDQDIL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   +      T +V DVM +NP  I ++     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRMIDRQQGFDVTAAVSDVMTENPLTISQEARAVEALEKMHEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD +K IG++   DL+  G+
Sbjct: 305 DDAKKVIGVISMHDLIEAGV 324


>gi|226951455|ref|ZP_03821919.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ATCC 27244]
 gi|226837803|gb|EEH70186.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ATCC 27244]
          Length = 325

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 191/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL ++  E++ +  L + +       F  A E +    GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KSALETLRIEQQAIEVLATQVDER----FDRACEILLQCSGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLGVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +AD+ LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADVALTLGLADEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+G  +P VK   P+   +  +S+KR G   +VDE   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTGSELPKVKPDTPMNKVLYEISDKRLGLTTIVDEQDTL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   +      T  V DVM  NP  I ++     A++ + +  I+  +VV
Sbjct: 245 LGIFTDGDLRRMIDRQQGFDVTAVVADVMTANPLTISQEARAVEALEKMHEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD +K IG++   DL+  G+
Sbjct: 305 DDAKKVIGVISMHDLIEAGV 324


>gi|156975894|ref|YP_001446801.1| hypothetical protein VIBHAR_03660 [Vibrio harveyi ATCC BAA-1116]
 gi|156527488|gb|ABU72574.1| hypothetical protein VIBHAR_03660 [Vibrio harveyi ATCC BAA-1116]
          Length = 323

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 197/319 (61%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L+         QF  A E I +  G+VV+ G+GKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEVSALQQLDQY----FDAQFEQACELILSNNGKVVVMGMGKSGHIGNKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R SI +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLSIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            + +S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R FS  DF 
Sbjct: 126 GKPESNMAKLSDLHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFSAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ +VM +NP     + L    + L++  NI+ L++ D+
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTAIGEVMTQNPTTAHPEMLAVEGVNLMQDKNINALILCDN 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 -NKIVGALNMHDLLKAGVM 323


>gi|163738083|ref|ZP_02145499.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
 gi|161388699|gb|EDQ13052.1| arabinose 5-phosphate isomerase [Phaeobacter gallaeciensis BS107]
          Length = 323

 Score =  344 bits (882), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 194/323 (60%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A + I  E R L +L   L       F  AV+ +   +GRV+++GIGKSGHIG 
Sbjct: 5   ETFLATARQVITDEARALDALADGLDAR----FAEAVDLVLQAEGRVIVSGIGKSGHIGH 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF IP
Sbjct: 61  KIAATLASTGTPAYFVHPAEASHGDLGMLSKGDVVLAISNSGEAPELANLLSFTRRFGIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++S   S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F 
Sbjct: 121 LIGLSSRMDSTLMKEADVHLQIPALGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFR 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG       D+MH G ++PLV    P+ DA+  +S+K FG   V    
Sbjct: 181 PENFRAFHPGGKLGARLSKVDDLMHDGTALPLVGADTPMSDALIEISQKGFGVAGVTGAN 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L+GIIT+GD+ R+    L   +  DVM  +P  I   +L   A+ ++    I+ L VV
Sbjct: 241 GTLQGIITDGDLRRHMD-GLLDKTAADVMTSSPTTIAPGSLAEEAVAIMNDRKITCLFVV 299

Query: 321 DDCQ---KAIGIVHFLDLLRFGI 340
           D      +A+G++H  D LR G+
Sbjct: 300 DPAGDTAQAVGLLHIHDCLRVGL 322


>gi|51039820|tpg|DAA00345.1| TPA_exp: KpsF-like [Caulobacter vibrioides]
          Length = 318

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 151/320 (47%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + VQ   R +  E   L  L  SL       F  AVE I   KGRVV TG+GKSGH+  K
Sbjct: 5   NAVQVGRRVLAVEADALRVLADSL----GEAFANAVETIFNAKGRVVCTGMGKSGHVARK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT + FVH AEASHGDLGMI  DD+++ LS SG+  EL   L YA+RFSIPL
Sbjct: 61  IAATLASTGTQAMFVHPAEASHGDLGMIGPDDVVLALSKSGAGRELADTLAYAKRFSIPL 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+   S +    DI+L LP  PE      APTTS  +Q+A+GDA+A+ALLE R F+ 
Sbjct: 121 IAMTAVADSPLGQAGDILLLLPDAPEGTAEVNAPTTSTTLQIALGDAIAVALLERRGFTA 180

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +     D+MH  D +PLV     + DA+ ++SEKRFG V VVD   
Sbjct: 181 SDFRVFHPGGKLGAMLRTVGDLMHGADELPLVAADAAMPDALLVMSEKRFGAVGVVDNAG 240

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L G+IT GD+ R+    L T +  +VM   P  I    L   A++++ +  I+VL VV+
Sbjct: 241 HLAGLITXGDLRRHMD-GLLTHTAGEVMTHAPLTIGPGALAAEALKVMNERRITVLFVVE 299

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              + +GI+H  DLLR G+I
Sbjct: 300 RE-RPVGILHVHDLLRAGVI 318


>gi|325205428|gb|ADZ00881.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M04-240196]
          Length = 326

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 204/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|323140929|ref|ZP_08075842.1| arabinose 5-phosphate isomerase [Phascolarctobacterium sp. YIT
           12067]
 gi|322414667|gb|EFY05473.1| arabinose 5-phosphate isomerase [Phascolarctobacterium sp. YIT
           12067]
          Length = 324

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 131/327 (40%), Positives = 190/327 (58%), Gaps = 10/327 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + ++ A   +  E   +  L       +   F  AV+ I   +GR VITG+GKSG IG 
Sbjct: 2   EAMLKHAQDVLRMEAEAILELV----PRVDENFAAAVKLILDCQGRTVITGMGKSGLIGR 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTPSF++H AE  HGDLGM+T  D++I LS SG + E+  IL   RR    
Sbjct: 58  KMAATFASTGTPSFYLHPAEGIHGDLGMVTESDVVIALSNSGETGEVLNILPSLRRIGAK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+  +  S +  +AD+VL +    E+CP GLAPT+S    LA GDALA+ALL+  NF+
Sbjct: 118 IIAMVGKPDSTLGKNADVVLNVGVSKEACPLGLAPTSSTTAALAYGDALALALLKKHNFT 177

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            + F + HPGG LG    +    +MH G+  P V     + DA+ ++++K  G V+VVD 
Sbjct: 178 ASQFAIFHPGGSLGRKLLLTVGSIMHKGEENPTVLADTKVQDALFVITDKGLGAVSVVDA 237

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---I 314
              ++G++T+GDI R   K  D     V ++M K PK I ED L   A+ L+  +    I
Sbjct: 238 DGVMQGVLTDGDIRRGLSKGVDFLQRPVCELMTKAPKTITEDKLAAQALHLMESNKPKPI 297

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +VL V+D   K IG++H  DL+R G++
Sbjct: 298 TVLPVIDKDNKVIGLLHMTDLVRQGVV 324


>gi|260772161|ref|ZP_05881078.1| arabinose 5-phosphate isomerase [Vibrio metschnikovii CIP 69.14]
 gi|260613028|gb|EEX38230.1| arabinose 5-phosphate isomerase [Vibrio metschnikovii CIP 69.14]
          Length = 324

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 196/319 (61%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E  GL  LE     +    F  A E I A K G+V + GIGKSGHIG K+A+T
Sbjct: 11  AQQVLATEIAGLQQLEQYFNAD----FTQACEMIIANKQGKVAVMGIGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+    +R +  +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALFPVLKRLNNRIISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A  ADI L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF 
Sbjct: 127 GNPRSTMANLADIHLQITVPEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  SD+MH G+++P V     + +A+  +S+K  G  AVV +  +L 
Sbjct: 187 LSHPGGALGRKLLLKLSDIMHQGEALPKVSPNALIREALLEISQKGLGMTAVVSDDDRLV 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++ ++E VM +NP V     L    + L+++  I+ LM+VD+
Sbjct: 247 GIFTDGDLRRILDKRVDIHSATIEQVMTQNPTVASPHLLAVEGLNLMQEKRINGLMLVDN 306

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 307 -HKLVGALNMHDLLKAGVM 324


>gi|325143037|gb|EGC65389.1| arabinose 5-phosphate isomerase [Neisseria meningitidis 961-5945]
 gi|325198959|gb|ADY94415.1| arabinose 5-phosphate isomerase [Neisseria meningitidis G2136]
          Length = 326

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 204/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 6   NEKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I
Sbjct: 62  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 122 TFVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D
Sbjct: 182 TPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTD 241

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 242 GQGRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNG 301

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D     IG ++  DLL   I+
Sbjct: 302 LLVTDADGVLIGALNMHDLLAARIV 326


>gi|91774493|ref|YP_544249.1| KpsF/GutQ family protein [Methylobacillus flagellatus KT]
 gi|91708480|gb|ABE48408.1| KpsF/GutQ family protein [Methylobacillus flagellatus KT]
          Length = 335

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 151/343 (44%), Positives = 200/343 (58%), Gaps = 13/343 (3%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H   S  K            + +Q A   +  E R + +L     G L   F  AVE I 
Sbjct: 3   HMGISKLKPSNSA------TTLLQLAREVLAIEAREVQALA----GRLDQSFVNAVELIL 52

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +GRVV+TGIGKSGHIG+K+A+TLASTGTP+FF+H AEASHGDLGMITRDD++I LS S
Sbjct: 53  QCRGRVVVTGIGKSGHIGNKIAATLASTGTPAFFMHPAEASHGDLGMITRDDVVIALSNS 112

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G +DEL A+L   +R   P+I+I+    S ++  ADI L      E+CP GLAPT S   
Sbjct: 113 GEADELLALLPPLKRIGTPIISISGNRHSTLSKAADIFLDAHVSQEACPLGLAPTASTTA 172

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLI 240
            LA+GDALA+ LL+ R FS  DF + HPGG +G    +   DVM SGD IP V +   L 
Sbjct: 173 ALALGDALAVTLLDQRGFSREDFALAHPGGSIGRRLLLHVQDVMRSGDDIPAVSVSSSLK 232

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILE 298
           D +  +S K  G  AV+D   K  GI T+GD+ R F    D+N   + DVM  +P+ IL 
Sbjct: 233 DGLLEMSRKGLGMTAVLDAADKPVGIFTDGDLRRAFEAGIDINGTRMADVMHAHPRSILP 292

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             L   A+ L+ Q++IS L+VVD     +G ++  DLL   ++
Sbjct: 293 GQLAVDALALMEQYSISSLLVVDQQGNLVGALNMHDLLMAKVV 335


>gi|328954186|ref|YP_004371520.1| KpsF/GutQ family protein [Desulfobacca acetoxidans DSM 11109]
 gi|328454510|gb|AEB10339.1| KpsF/GutQ family protein [Desulfobacca acetoxidans DSM 11109]
          Length = 334

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 135/332 (40%), Positives = 191/332 (57%), Gaps = 7/332 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T +   L     +Q A   +  E  G+++L      +L   F  AV+ I   KGR+++T
Sbjct: 1   MTAQKRPLSHPKILQLAREVLAIESEGIANLI----PKLDHNFVRAVQMIFQAKGRLIVT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG +  K+ +TL STG PS F+H  EA HGDLGMI+  D+++ LS SG + EL  +
Sbjct: 57  GVGKSGIVARKIVATLNSTGAPSLFLHPVEAMHGDLGMISPQDVVLALSNSGETSELTIL 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R  +PLIA+T   +S +A H+D+V+ +    E+CP GLAPT S    LA+GDALA
Sbjct: 117 LPSIKRLGVPLIALTGRVESTLASHSDVVIDVGVPREACPLGLAPTASTTAALAMGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL  R F  +DF   HPGG LG  L +   +VM +G+ +P V    PLI A+  + EK
Sbjct: 177 VALLTQRGFKASDFRRFHPGGSLGARLSLAIGEVMLTGNRVPRVHPEDPLISALREMDEK 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            FG   VVD    L GI T+GD+ R   K   L   +V  VM  +P  I  ++L + A++
Sbjct: 237 GFGATLVVDGAGVLLGIFTDGDLRRCLRKFQHLQDKTVAQVMTPSPHAIGPESLASQALE 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +    I+VL VVD  +  +GIVH  DLL  G
Sbjct: 297 HMEHKAITVLPVVDAKRVVLGIVHLHDLLGRG 328


>gi|54310338|ref|YP_131358.1| sugar phosphate isomerase [Photobacterium profundum SS9]
 gi|46914779|emb|CAG21556.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           SS9]
          Length = 323

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 128/318 (40%), Positives = 199/318 (62%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E   L  +   + G     F  A E I +  G+V++ G+GKSGHIG+K+A+TL
Sbjct: 11  GRKVLEIEIAALQQISQYING----CFTQACELILSSHGKVIVMGMGKSGHIGNKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFFVH  EASHGDLGMI + D+++ +S SG + E+ ++L   +R  IPLI++T 
Sbjct: 67  ASTGTPSFFVHPGEASHGDLGMIEKGDVVLAISNSGEASEILSLLPVIKRLGIPLISVTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           + +S +A  + + L +    E+CP  LAPT+S    LA+GDALAIAL+E+R F+ NDF +
Sbjct: 127 KPESSMAKFSQVHLQITVAAEACPLNLAPTSSTTATLAMGDALAIALMEARGFTANDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +C +DVMH+GD +P++     + DA+  +S K  G  AVV+  Q+L G
Sbjct: 187 SHPGGALGRKLLLCIADVMHTGDLLPIIDEAATIKDALLEVSRKGLGMTAVVNSEQQLTG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D++  ++ DVM +NP  I  + L    ++L+  + I+ L++  + 
Sbjct: 247 IFTDGDLRRLLDKRVDIHNTAIGDVMGRNPSTIEANVLAAEGLKLMEDNKINGLLIT-EN 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G ++  DLL+ G++
Sbjct: 306 GQLVGALNMHDLLKAGVM 323


>gi|89075262|ref|ZP_01161689.1| hypothetical sugar phosphate isomerase [Photobacterium sp. SKA34]
 gi|89048943|gb|EAR54511.1| hypothetical sugar phosphate isomerase [Photobacterium sp. SKA34]
          Length = 323

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 121/318 (38%), Positives = 197/318 (61%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E + L ++   +       F+ A + +   +G+V++ G+GKSGHIG KLA+TL
Sbjct: 11  GKKVLNIEIQALQNISRYI----DDSFNKACQLVLDCEGKVIVMGMGKSGHIGRKLAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTP+FFVH  EASHGDLGMI  +D++I +S SG + E+ A+L   +R  IP+I++T 
Sbjct: 67  ASTGTPAFFVHPGEASHGDLGMIKHEDVVIAISNSGEASEILALLPVIKRLGIPMISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  A I L +  E E+CP  LAPT+S    L +GDALAI+++E+R F+ +DF +
Sbjct: 127 KPTSSMAKMAIINLQITVEKEACPLNLAPTSSTTATLVMGDALAISVMEARGFTADDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +DVMH+G  +P+++    + DA+  +S+K  G  A+V+  Q+L G
Sbjct: 187 SHPGGALGRKLLMRIADVMHTGKMLPIIEETASIKDALLEISQKGLGMTAIVNNKQQLSG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R      D++  ++ +VM  NP+ I    L    ++++    I+ L+V ++ 
Sbjct: 247 IFTDGDLRRLLDNHVDIHNTNIGNVMSCNPQTISPQLLAAEGLKIMEDRKINGLLVTENS 306

Query: 324 QKAIGIVHFLDLLRFGII 341
           Q  +G ++  DLL+ G++
Sbjct: 307 Q-LVGALNMHDLLKAGVM 323


>gi|254452733|ref|ZP_05066170.1| arabinose 5-phosphate isomerase [Octadecabacter antarcticus 238]
 gi|198267139|gb|EDY91409.1| arabinose 5-phosphate isomerase [Octadecabacter antarcticus 238]
          Length = 322

 Score =  343 bits (881), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 147/319 (46%), Positives = 203/319 (63%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A R I AE   L +L  ++ G L+     AVE I   KGR++I+GIGKSGHI  K+A+
Sbjct: 9   DTARRVIRAEADALMALADAIDGSLAD----AVELILNAKGRIIISGIGKSGHIARKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+TR D+++ +S SG + EL  ++ Y +RF+IPLI +
Sbjct: 65  TLASTGTPAHFVHPAEASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGV 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  +DIVL +PK PE+C  G+ PTTS  M LA+GDAL +A++E R F+ ++F
Sbjct: 125 TSRAESSLASQSDIVLLMPKLPEACGTGVVPTTSTTMTLALGDALCVAIMEHRAFTPDNF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGGKLG       D+MH  D+IPLV    P+ D +  +S+K FG V V+D    L 
Sbjct: 185 RDFHPGGKLGAQLSRVGDLMHKDDAIPLVGEKTPMSDTLLTISQKGFGVVGVLDNNGYLA 244

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ RN    L  L+  +VM + P  I   +L   A+ ++ +  I+ L VVD   
Sbjct: 245 GIVTDGDLRRNMA-GLLDLTAGEVMTRAPGTIGPASLAEEAVNVMNERKITCLFVVDPNG 303

Query: 325 --KAIGIVHFLDLLRFGII 341
             K +GI+H  D LR GI+
Sbjct: 304 SRKVVGILHIHDCLRAGIV 322


>gi|86136834|ref|ZP_01055412.1| arabinose 5-phosphate isomerase [Roseobacter sp. MED193]
 gi|85826158|gb|EAQ46355.1| arabinose 5-phosphate isomerase [Roseobacter sp. MED193]
          Length = 322

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 193/323 (59%), Gaps = 7/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A +    E R L +L  S        F  A   + A  GR++I+GIGKSGHIG
Sbjct: 4   SEQLLATARQVATDEARALEALAESFDER----FVEAANLVLAATGRIIISGIGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP++FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF I
Sbjct: 60  RKIAATLASTGTPAYFVHPAEASHGDLGMLSKGDVVVAISNSGEAPELANLLAFTRRFDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI ++S+  S +   AD+ L +P   E+C +G+ P+ S  + LA+GDALAIA+++ R+F
Sbjct: 120 PLIGLSSKPDSTLMTQADVQLQIPAMGEACGYGIVPSNSTTLTLAMGDALAIAIMKHRDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              +F   HPGGKLG      SD+MH  +++P+V    P+ DA+  +S+K FG   V D 
Sbjct: 180 RPENFRDFHPGGKLGAQLSKVSDLMHGDEALPVVAADTPMSDALIEISQKGFGVSGVTDA 239

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L GIIT+GD+ R+    L       VM K+P  I  D L   A+ ++ Q  I+ L V
Sbjct: 240 TGNLLGIITDGDLRRHMD-GLLQKEAAAVMTKDPTTISPDALAAEAVAIMNQRKITCLFV 298

Query: 320 VD--DCQKAIGIVHFLDLLRFGI 340
           VD    Q+A G++H  D LR G+
Sbjct: 299 VDPAKGQRAEGLLHIHDCLRAGL 321


>gi|118588411|ref|ZP_01545820.1| Sugar isomerase, KpsF/GutQ family protein [Stappia aggregata IAM
           12614]
 gi|118439117|gb|EAV45749.1| Sugar isomerase, KpsF/GutQ family protein [Stappia aggregata IAM
           12614]
          Length = 339

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 162/337 (48%), Positives = 228/337 (67%), Gaps = 1/337 (0%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
           F  +  +    + +S M +  +  A R++  E  GLS++ ++L+  L+  F    E I+ 
Sbjct: 2   FMTTVLRDPVSEENSDMTSLCLVSAERTLETEIAGLSAVRAALKNGLAVPFQKTFELIQK 61

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            KGRVVITGIGKSGHIG+K+A++LASTGTPSFFVHA+EASHGDLGMIT  D++I LSWSG
Sbjct: 62  SKGRVVITGIGKSGHIGTKIAASLASTGTPSFFVHASEASHGDLGMITEGDVVIALSWSG 121

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + EL  I+ Y RRF +PL+AITS   S +   ADIV+ LP   E+CPHGLAPTTSA++Q
Sbjct: 122 ETQELAGIVSYTRRFKVPLVAITSRKDSTLGRAADIVMNLPAVTEACPHGLAPTTSALIQ 181

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           LA+GDALA+ALLE R F+  DF V HPGG+LG     A D+MH+G+ +PLV    P+ + 
Sbjct: 182 LAVGDALAVALLEGRGFTAQDFRVFHPGGRLGASLKTAKDIMHTGERMPLVSANTPMSEG 241

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           I +++++ FG + VVDE ++L GIIT+GD+ R+   +L   S  ++M + PK +  DTL 
Sbjct: 242 IVLMTQRGFGVLGVVDELKQLIGIITDGDLRRHVSSNLLAKSAGEIMTRAPKTVSTDTLS 301

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              ++L    +I+ + V+ +  + +GIVH  DLLR G
Sbjct: 302 ASILELANSLSITSVFVI-EDGRPVGIVHLHDLLRIG 337


>gi|325132906|gb|EGC55583.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M6190]
 gi|325138891|gb|EGC61441.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ES14902]
          Length = 326

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E+ GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEEEGL----REIATELDENFVLAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|77361461|ref|YP_341036.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76876372|emb|CAI87594.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas haloplanktis
           TAC125]
          Length = 323

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 124/327 (37%), Positives = 206/327 (62%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K S ++  LR +  E++ L  ++  +       FH A + +    GR++I G+GKSGH
Sbjct: 1   MTKLSFIEQGLRVLDIERQALFDIKQYV----DDNFHQACQLMYDCSGRIIIIGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTG+P+FFVH  EASHGDLGMIT++D+++++S SG + E+  I+   +R 
Sbjct: 57  IGHKIAATLASTGSPAFFVHPGEASHGDLGMITKNDVVMLISNSGETSEVLNIIPVLKRL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I++T   +S +A  A++ + +  E E+C  GLAPT S    LA+GDA+A+ALLE+R
Sbjct: 117 GAKIISMTGNTQSTMATLANVHVCIKVEKEACSLGLAPTASTTATLAMGDAMAVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+ +DF + HPGG LG  L +   DVMHSG + P++     + DA+  ++ K  G  A+
Sbjct: 177 GFTADDFALSHPGGSLGKRLLLTLKDVMHSGVNTPIITTSQTIKDALIEMTAKGLGMTAI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD+ Q+L G+ T+GD+ R   +  D++T S++ VM K+     +D L   A+ ++    I
Sbjct: 237 VDDNQQLAGLFTDGDLRRILEQRVDIHTTSIDAVMTKSCTTATQDMLAAQALNIMEHKRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+++++  + IG ++  DLL+ G++
Sbjct: 297 NGLIIINEHNQPIGALNMQDLLKAGVL 323


>gi|15676267|ref|NP_273401.1| KpsF/GutQ family sugar isomerase [Neisseria meningitidis MC58]
 gi|7225574|gb|AAF40795.1| sugar isomerase, KpsF/GutQ family [Neisseria meningitidis MC58]
 gi|316984358|gb|EFV63332.1| arabinose 5-phosphate isomerase [Neisseria meningitidis H44/76]
          Length = 324

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   + AE  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   KYLDWAREVLHAEAEGL----REIAAELDKNFVLAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 62  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 302 VTDADGVLIGALNMHDLLAARIV 324


>gi|261391877|emb|CAX49336.1| arabinose-5-phosphate isomerase [Neisseria meningitidis 8013]
          Length = 324

 Score =  343 bits (880), Expect = 2e-92,   Method: Composition-based stats.
 Identities = 138/323 (42%), Positives = 203/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 6   KYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 62  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 122 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 182 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 241

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 242 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D      G ++  DLL   I+
Sbjct: 302 VTDADGVLTGALNMHDLLAARIV 324


>gi|304310281|ref|YP_003809879.1| hypothetical protein HDN1F_06350 [gamma proteobacterium HdN1]
 gi|301796014|emb|CBL44218.1| conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 324

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 132/325 (40%), Positives = 193/325 (59%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +  A R I  E +   +L   +       F  A + I A KGRV++TG+GKSGHIG
Sbjct: 4   SHDFIGSAHRVIDIEVQATEALRPRI----DASFVRACQLILACKGRVIVTGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           SK+A+TL+STGTP+FFVH  EA HGDLG IT +DL+I +S SG+++E+ +IL   +R   
Sbjct: 60  SKIAATLSSTGTPAFFVHPGEARHGDLGTITGEDLVIAISNSGNTEEVVSILPVIKRKGS 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI +T    S +A  AD+ L +    E+CP GLAPT S  + L +GDALA+ALLE+R F
Sbjct: 120 LLITLTGNPHSTLATQADVNLDVSVAQEACPLGLAPTASTTVTLVMGDALAVALLEARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + NDF + HPGG LG    +   +VM +GD IP V     +  A+  +S K  G   +VD
Sbjct: 180 TANDFALSHPGGALGRKLLLLVENVMQTGDRIPTVTADISISKALLEISSKGLGMTGIVD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   L G+ T+GD+ R   +  D++   + +VM    KV     L   A+ ++ +  I+ 
Sbjct: 240 DQGILIGVYTDGDLRRTLDQGLDIHKTLLREVMSTKCKVTHPKVLAVEALAIMEKSKING 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           LMVVDD ++ +G ++  DLLR G++
Sbjct: 300 LMVVDDDRRPVGALNMHDLLRAGVM 324


>gi|90413004|ref|ZP_01221002.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           3TCK]
 gi|90326019|gb|EAS42458.1| hypothetical sugar phosphate isomerase [Photobacterium profundum
           3TCK]
          Length = 323

 Score =  343 bits (880), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 127/318 (39%), Positives = 198/318 (62%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E   L  +   + G     F  A E I +  G+V++ G+GKSGHIG+K+A+TL
Sbjct: 11  GRKVLEIEIAALQQISQYING----CFTQACELILSSHGKVIVMGMGKSGHIGNKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFFVH  EASHGDLGMI + D+++ +S SG + E+ ++L   +R  IPLI++T 
Sbjct: 67  ASTGTPSFFVHPGEASHGDLGMIEKGDVVLAISNSGEAGEILSLLPVIKRLGIPLISVTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           + +S +A  + + L +    E+CP  LAPT+S    LA+GDALAIAL+E+R F+ NDF +
Sbjct: 127 KPESSMAKFSQVHLQITVAAEACPLNLAPTSSTTATLAMGDALAIALMEARGFTANDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +  +DVMH+GD +P++     + DA+  +S K  G  AVV+  Q+L G
Sbjct: 187 SHPGGALGRKLLLRIADVMHTGDLLPIINEAATIKDALLEVSRKGLGMTAVVNSEQQLTG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D++  ++ DVM +NP  I  + L    ++L+  + I+ L++  + 
Sbjct: 247 IFTDGDLRRLLDKRVDIHNTAIGDVMGRNPSTIEANVLAAEGLKLMEDNKINGLLIT-EN 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G ++  DLL+ G++
Sbjct: 306 GQLVGALNMHDLLKAGVM 323


>gi|269468984|gb|EEZ80557.1| sugar phosphate isomerase [uncultured SUP05 cluster bacterium]
          Length = 321

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/326 (40%), Positives = 197/326 (60%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A   I+ E + ++ L  SL       F  A + I+   G+V++ G+GKSGHI
Sbjct: 1   MSNSLIQSAKDVILTEAQAVTKLAESLDQ----SFVDACQLIQNCTGKVILIGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+T ASTGTPSF VH  EA HGDLGMIT  D++I +S+SG SDE+  ++   +R  
Sbjct: 57  GNKIAATFASTGTPSFAVHPGEAGHGDLGMITEGDVVITISYSGESDEIMTLVPVIQRLG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+I +T    S +    ++ L +  E E+CPH LAPT+S  + LA+GDALA++LL  + 
Sbjct: 117 VPIIGMTGNAHSSIGEVCNVHLDVGVEKEACPHNLAPTSSTTVALAMGDALAVSLLTEKG 176

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG   +    ++M +GD IP+V     L+DA+ ++S+K  G V + 
Sbjct: 177 FSPDDFARSHPSGALGRRLLTFVKNIMKTGDDIPMVSADTKLLDALLVMSQKALGMVLIT 236

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D G  LKGI T+GD+ R    H D+  L++ DVM  N K I       VA+Q++ + N++
Sbjct: 237 D-GSALKGIFTDGDLRRVLEEHSDIQALTIGDVMTPNCKSISASKPAVVAVQIMDEFNLN 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD    +G ++   L++  II
Sbjct: 296 SLPVVDDNNHVVGAINTHTLMQAKII 321


>gi|254805612|ref|YP_003083833.1| putative sugar isomerase [Neisseria meningitidis alpha14]
 gi|254669154|emb|CBA07840.1| putative sugar isomerase [Neisseria meningitidis alpha14]
 gi|325202829|gb|ADY98283.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240149]
 gi|325208822|gb|ADZ04274.1| arabinose 5-phosphate isomerase [Neisseria meningitidis NZ-05/33]
          Length = 326

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 204/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|148265016|ref|YP_001231722.1| KpsF/GutQ family protein [Geobacter uraniireducens Rf4]
 gi|146398516|gb|ABQ27149.1| KpsF/GutQ family protein [Geobacter uraniireducens Rf4]
          Length = 321

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 191/323 (59%), Gaps = 9/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A + I  E   L SL  ++ GE    F  AV  I A +GRVV+TG+GKSG IG K+
Sbjct: 2   ILEEAKKVIRIEAEALLSLADAINGE----FEKAVRLILASRGRVVVTGMGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    L+
Sbjct: 58  ASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETEEVVRILPIIKRLGASLV 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T    S +A   D+ L +  + E+CP GLAPT S    LA+GDAL++ALL  R F+  
Sbjct: 118 AMTGNPSSNLAKAGDVFLDISVKEEACPLGLAPTASTTATLAMGDALSVALLLERGFNAE 177

Query: 203 DFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG   +    D+MH G++IPLV  G  + +A+ +++ K  G   V     
Sbjct: 178 DFALFHPGGALGKKLILTVEDMMHGGEAIPLVSAGTLMREALFVITSKGLGITGVTGADG 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G+IT+GD+ R   K  D+  L   D+M   PK I    L   A+Q + Q +I+ L V
Sbjct: 238 ALLGVITDGDLRRALEKGMDIINLPASDLMSMKPKRINRSELAAKALQQMEQFSITSLFV 297

Query: 320 VDDCQ--KAIGIVHFLDLLRFGI 340
            ++    + +GI+H  DLL+ GI
Sbjct: 298 FENDSSFRPVGIIHLHDLLKAGI 320


>gi|258625810|ref|ZP_05720689.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM603]
 gi|258582048|gb|EEW06918.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM603]
          Length = 326

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 196/319 (61%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLRTEIAALQQLEQYINAD----FASACATILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGLGMTAVVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L++   I+ LM+VD+
Sbjct: 249 GIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGLNLMQAKRINGLMLVDN 308

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 309 -NKLVGALNMHDLLKAGVM 326


>gi|315125508|ref|YP_004067511.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
 gi|315014021|gb|ADT67359.1| D-arabinose 5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
          Length = 323

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 124/323 (38%), Positives = 200/323 (61%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q  LR +  E++ LS +   +       F+ A + +    GR+++ G+GKSGHIG+K
Sbjct: 5   NFIQQGLRVLEIERQALSDITQYVN----ESFNQACQLMFDCSGRIIVIGMGKSGHIGNK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTG+P+FFVH  EASHGDLGMIT +D++I++S SG + E+  I+   +R    +
Sbjct: 61  IAATLASTGSPAFFVHPGEASHGDLGMITANDVVILISNSGETSEVLNIIPVLKRIGAKM 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  A++ + +  E E+C  GLAPT S    LA+GDA+A+ALLE+R F+ 
Sbjct: 121 IAMTGNQGSTMATLANVHVCIKVEQEACSLGLAPTASTTATLAMGDAMAVALLEARGFTA 180

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HPGG LG  L +   DVMHSG   P++     + DA+  +S K  G  A+VD  
Sbjct: 181 DDFALSHPGGSLGKRLLLTLKDVMHSGADTPIINETQTIKDALIEMSAKGLGMTAIVDSD 240

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           Q+L G+ T+GD+ R   +  D+++  +  VM K+     ++ L   A+ ++ Q  I+ L+
Sbjct: 241 QQLSGLFTDGDLRRILEQRIDIHSTEINVVMTKSCTTATQEMLAAEALNIMEQKRINGLI 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V+++  + IG ++  DLL+ G++
Sbjct: 301 VINEHNQPIGALNMQDLLKAGVL 323


>gi|258591075|emb|CBE67370.1| Arabinose 5-phosphate isomerase [NC10 bacterium 'Dutch sediment']
          Length = 319

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 188/320 (58%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
               + +  E   + +L   L       F   VE ++  +GRVV+TG+GKSG +  K+AS
Sbjct: 4   DRGRQVLQIEAEAILALIPKLDER----FDRVVEILRDCRGRVVLTGMGKSGSVAQKIAS 59

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTGTP+FF+H AE  HGDLGM+ R D++I +S SG +DEL  +L   +R  + LIA+
Sbjct: 60  TMASTGTPAFFLHPAEGGHGDLGMLVRGDVVIAVSNSGETDELVGLLPAIKRLGLMLIAL 119

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
             +  S +A  +D+ + +    E+CP  LAPT S    LA+GDALA+ALLE R F+E DF
Sbjct: 120 VGDPASTLARQSDVAIDVGVAKEACPLALAPTASTTAALAMGDALAVALLEQRGFTEADF 179

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            +LHP G LG        D+M  G+ +P+++    + +A+  +S KR G  AVVDE   +
Sbjct: 180 ALLHPAGSLGRRLLWRVQDLMRVGEQLPIIRQDALMSEALAEISRKRLGMTAVVDETGIV 239

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   +  DL      D M  +PK I  D L   A++++ +H I+ L++VD
Sbjct: 240 IGIITDGDLRRALSQGVDLLQRQARDCMTPHPKTIDRDALAAKALEVMERHAITSLLIVD 299

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                 G++H  DLLR G++
Sbjct: 300 PKGNPEGVIHLHDLLRAGVV 319


>gi|329118786|ref|ZP_08247483.1| arabinose 5-phosphate isomerase [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327465073|gb|EGF11361.1| arabinose 5-phosphate isomerase [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 332

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 148/334 (44%), Positives = 206/334 (61%), Gaps = 10/334 (2%)

Query: 14  KGHSLMKNSTVQ---CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +   +  N+  Q    A   +  E  GL  +   L G+    F  AV+ +    GR+V+T
Sbjct: 3   RKTIMQTNNAAQYTAWAQEVLRIEADGLREISDGLNGD----FAAAVDAVLHCTGRLVVT 58

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSGH+G K+A+TLASTGTP+FFVH AEA+HGDLGMI   D ++ +S SG SDE+ AI
Sbjct: 59  GIGKSGHVGHKIAATLASTGTPAFFVHPAEAAHGDLGMIVDGDAVLAISNSGESDEINAI 118

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R +I LI IT+  +S +A HADI LT     E+CP GLAPT+S    +A+GDALA
Sbjct: 119 LPALKRKNITLICITAHPESTMARHADIHLTAAVSQEACPLGLAPTSSTTAVMALGDALA 178

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           ++LL +R+F+  DF + HP G+LG  L +  +D+MH G   P V    PL DAI I+SEK
Sbjct: 179 VSLLRARSFTREDFALSHPAGRLGKRLLLRVADLMHGGADSPAVAEHTPLKDAIVIMSEK 238

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G +AV D   +LKG++T+GD+ R F K      L+V DVM   PK I  D L T A++
Sbjct: 239 GLGMLAVTDASGRLKGVLTDGDLRRLFQKSETFAGLTVNDVMHDTPKTIAPDKLATEALK 298

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++++NI  L  VD+    +G ++  DLL+  I+
Sbjct: 299 EMQRYNIGGLFAVDENGLLLGALNMHDLLQARIV 332


>gi|110677767|ref|YP_680774.1| arabinose 5-phosphate isomerase [Roseobacter denitrificans OCh 114]
 gi|109453883|gb|ABG30088.1| arabinose 5-phosphate isomerase [Roseobacter denitrificans OCh 114]
          Length = 320

 Score =  343 bits (879), Expect = 3e-92,   Method: Composition-based stats.
 Identities = 141/324 (43%), Positives = 196/324 (60%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M       A R I  E   L  LE S+       F  AVE + A  GR+++ G+GKSGHI
Sbjct: 1   MSGIFQDTARRVIRIEIDALQQLEQSI----DDSFAKAVELMIAATGRIIVCGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGM+   D++IVLS SG + EL  ++ Y RRFS
Sbjct: 57  ARKIAATLASTGTPAHFVHPAEASHGDLGMMGAGDVVIVLSNSGETPELADVIAYTRRFS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I + S  +S +   +D+ L LP+  E+C  G+ PT+S  M LA+GDALA+AL+E R 
Sbjct: 117 IPMIGVASRPESTLLRQSDVALVLPRAQEACGTGIVPTSSTTMTLALGDALAVALMEHRK 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      SD+MH+G ++P+V    P+ +A+  + +K FG VAV D
Sbjct: 177 FTPEHFRAFHPGGKLGAQLSKVSDLMHTGRAVPVVPGDAPMSEALREIGQKGFGVVAVSD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L+GIIT GDI R+    L +    +VM  +P  I  D L   A+ ++    I+ L+
Sbjct: 237 PQGLLQGIITNGDISRHMD-GLASFEAHNVMTPSPVTIPPDALAEQAVGIMNDKKITCLL 295

Query: 319 VVD--DCQKAIGIVHFLDLLRFGI 340
           VVD  + +K +G++H  D LR G+
Sbjct: 296 VVDPQEPRKLVGLIHIHDCLRIGL 319


>gi|109692189|gb|ABG37981.1| GutQ [Alkalimonas amylolytica]
          Length = 322

 Score =  343 bits (879), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 126/326 (38%), Positives = 193/326 (59%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M     Q AL+ +  E   +S L   +  +    F+ A + I    GRV+++G+GKSGHI
Sbjct: 1   MTIDFTQQALQVLQIEATAISQLARFVNDD----FNKACQLIMDSPGRVIVSGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +K+A+T ASTGTP+FFVH  EASHGDLGMIT+DD++I +S SG + E+  I+   +R  
Sbjct: 57  ANKIAATFASTGTPAFFVHPGEASHGDLGMITKDDVVIAISNSGETGEVLTIIPVLKRIG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI ++    S +A  +D+ + +  E E+CP GLAPT S    LA+GDA+A+ALL +R 
Sbjct: 117 AHLIGMSGNPASTLARLSDVHVCVQVEQEACPLGLAPTASTTATLAMGDAMAVALLNARG 176

Query: 199 FSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF + HP G     L +   DVMH+G++IP+V     +  A+  +S K  G   VV
Sbjct: 177 FSADDFALSHPGGSLGRRLLLRLEDVMHTGNTIPMVPTTATIKTALLEMSAKGLGMTTVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+   L+GI T+GD+ R   +  D++   +  VM++N        L   A++L+ Q  I+
Sbjct: 237 DKHGVLQGIFTDGDLRRILDQRYDIHDTLITAVMVRNCITAQPQMLAAEALKLMEQRKIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L++VD  Q  +G ++  DLL+ G++
Sbjct: 297 GLVIVDQHQHPVGAMNMHDLLKAGVL 322


>gi|325130881|gb|EGC53611.1| arabinose 5-phosphate isomerase [Neisseria meningitidis OX99.30304]
 gi|325136926|gb|EGC59523.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M0579]
          Length = 326

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 138/323 (42%), Positives = 203/323 (62%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++  PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLSTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|319945409|ref|ZP_08019669.1| arabinose 5-phosphate isomerase [Lautropia mirabilis ATCC 51599]
 gi|319741195|gb|EFV93622.1| arabinose 5-phosphate isomerase [Lautropia mirabilis ATCC 51599]
          Length = 332

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 193/325 (59%), Gaps = 8/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ +  A + +  E   +  L  +L       F  A  ++ A +GRV+++G+GKSGHI  
Sbjct: 12  NALLDRARQVLAIEADAVQHLRDTL----DEGFCRACRQVLACQGRVIVSGMGKSGHIAR 67

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T  D+ I LS SG +DEL  I+   +R    
Sbjct: 68  KIAATLASTGTPAFFVHPAEASHGDLGMVTAQDVFIALSNSGRTDELMTIVPQVKRVGAA 127

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T + +S +A +ADI L    + E+CP  LAPT S    LA+GDALA+ALLE+R F 
Sbjct: 128 LIALTGDAESPLAQYADIHLYAGAQKEACPLNLAPTASTTAALALGDALAVALLEARGFG 187

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG       SD+M  GD +P  +      DA+  +S KR G VAV+D+
Sbjct: 188 SEDFARSHPGGALGRRLLTHVSDIMRQGDELPTCRPQTLFTDALLEISHKRMGMVAVLDD 247

Query: 260 GQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             ++ GI T+GD+ R F     DL  L++ +VM  NP  I  + L   A++++    I+ 
Sbjct: 248 ENRVAGIFTDGDLRRVFSGSQPDLTRLTIGEVMTANPITIGAEALAVEAVRIMESRRITQ 307

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++V D  +  +G +HF DLL   ++
Sbjct: 308 ILVTDRQRHLVGALHFHDLLAAKVV 332


>gi|260886821|ref|ZP_05898084.1| arabinose 5-phosphate isomerase [Selenomonas sputigena ATCC 35185]
 gi|260863420|gb|EEX77920.1| arabinose 5-phosphate isomerase [Selenomonas sputigena ATCC 35185]
          Length = 377

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 133/337 (39%), Positives = 198/337 (58%), Gaps = 11/337 (3%)

Query: 12  TRKGHSLMKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
             KG   MK   + + A+ ++  E   +  L  S+  E    F  AVE +     R+V+T
Sbjct: 45  NGKGEQRMKRDVIWEKAVETLSMEAAAVKKLTESVDEE----FCRAVECVLDCTARIVVT 100

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGH+G K+A+TLASTGTPSFF+H AEA HGDLGM+T  D+++ +S SG   E+  I
Sbjct: 101 GMGKSGHVGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAISNSGEVQEVVKI 160

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L    R    +IA+T    S +A ++D V+ +  EPE+CP GLAPTTS    LA+GDA+A
Sbjct: 161 LPVIHRIGATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTSTTATLAMGDAIA 220

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +A++  RNF + DF + HPGG LG    +   DVMH+G+  P+V       DA+ +++EK
Sbjct: 221 VAVMSVRNFKKQDFALFHPGGALGRRLLLKVQDVMHTGEENPVVSGEKTAKDALFVMTEK 280

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G V+V D   +  G++T+G I R   KD       V ++M   P  I  D L T A+ 
Sbjct: 281 GLGAVSVTDAAGRFIGLLTDGIIRRALAKDYAFLDEPVHEIMFTEPLTIHADELATAALS 340

Query: 308 LLRQH---NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ +H    ++VL V+D+    +G++H  DLL+ G++
Sbjct: 341 VMEKHEPRPVTVLPVIDEKGAPVGMIHLTDLLKQGVV 377


>gi|114571041|ref|YP_757721.1| KpsF/GutQ family protein [Maricaulis maris MCS10]
 gi|114341503|gb|ABI66783.1| KpsF/GutQ family protein [Maricaulis maris MCS10]
          Length = 322

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 132/325 (40%), Positives = 199/325 (61%), Gaps = 6/325 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +  +VQ A R I  E+ G+ +LE S+  +    F   V +++ +KGR++  G+GKSGH
Sbjct: 1   MSEIDSVQSARRVIAIEREGMDALEKSISTD----FANTVSRLRGVKGRLICAGVGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +  K+A+TLASTGTP+++VH  EASHGDLGMI  DD ++ LS SG + EL  ++ Y RRF
Sbjct: 57  VARKIAATLASTGTPAYYVHPTEASHGDLGMIGTDDAVLALSKSGETRELGDLIAYCRRF 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLIA+T++  S +    D +L +P+ PE+C    APTTS  + +A+GDALA+ALLE+R
Sbjct: 117 GVPLIAMTAQPDSSLGRAGDFLLAIPQAPEACGETRAPTTSTTLMMALGDALAVALLEAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+  DF   HPGG LG       D+MH+G+++PL+     + + +  ++ K FGC  +V
Sbjct: 177 GFTATDFKTFHPGGALGAALATVQDIMHAGNAVPLIGTDAQMSEVLIEMTTKSFGCAGIV 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
               KL GIIT+GD+ R+    L      DVM   P+      L   A++L+      I+
Sbjct: 237 GADGKLAGIITDGDLRRHMGAGLFDKRAGDVMTVGPRTGSASMLAADALRLMTAGTPKIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
              +VDD ++ +GI+H  DLLR G+
Sbjct: 297 QFFIVDDDERPVGILHLHDLLRVGL 321


>gi|255658896|ref|ZP_05404305.1| arabinose 5-phosphate isomerase [Mitsuokella multacida DSM 20544]
 gi|260848845|gb|EEX68852.1| arabinose 5-phosphate isomerase [Mitsuokella multacida DSM 20544]
          Length = 323

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 132/326 (40%), Positives = 195/326 (59%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S  + A+ ++  E + + +L+  +  E    F  AV  I     RVV+TG+GKSGH+G K
Sbjct: 2   SIKERAIETLDIEGKAVLALKDRIGDE----FVAAVNCILKCPARVVVTGMGKSGHVGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H AEA HGDLGM+T +D++I +S SG S E+  IL   RR    +
Sbjct: 58  IAATLASTGTPSFFLHPAEAFHGDLGMVTENDVVIAISNSGESTEIVNILPIIRRIGATI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA++   +S +    D  + +  E E+CP GLAPT S    LA+GDA+A+AL+  RNF+ 
Sbjct: 118 IAMSGRRESQLGKFCDYFIDISVEREACPLGLAPTASTTATLAMGDAIAMALMSERNFTS 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +   +VMH+G   PL+  G  + DA+ ++++K  G V+VVD+ 
Sbjct: 178 QDFAMFHPGGALGRRLLLKVENVMHTGKDNPLIHCGKTVKDALFVMTDKGLGAVSVVDDE 237

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
            K  G+IT+G I R   KD      +VE +M   P  I    +   A+ ++ +H    ++
Sbjct: 238 GKFVGLITDGIIRRALAKDYKFLDEAVEKIMFTEPLTIAPQQMAAAALSVMEKHKPRPVT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL V+D+    +GIVH  DLLR G++
Sbjct: 298 VLPVIDEKGVPVGIVHLTDLLRQGVV 323


>gi|71909030|ref|YP_286617.1| KpsF/GutQ [Dechloromonas aromatica RCB]
 gi|71848651|gb|AAZ48147.1| KpsF/GutQ [Dechloromonas aromatica RCB]
          Length = 332

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 137/334 (41%), Positives = 191/334 (57%), Gaps = 7/334 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
            + K H       ++   +++  E   + +L    QG ++  F  AVE I    GR++++
Sbjct: 3   PSPKPHRFSPERALELGRQTLSIEAAAVEAL----QGRINGDFAKAVELILNSHGRLIVS 58

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHI  K+A+T+ASTGTP++FVH AEASHGDLGMITRDD+++ LS SG S EL +I
Sbjct: 59  GMGKSGHIARKIAATMASTGTPAYFVHPAEASHGDLGMITRDDVLLALSNSGESGELLSI 118

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R    +I++T    S +A  ADI L    E E+CPH LAPT S    LA+GDALA
Sbjct: 119 LPALKRQGAKIISMTGVPTSTLAREADIHLDAGVEQEACPHNLAPTASTTAALALGDALA 178

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL++R F   DF   HPGG LG        DVM + D +P V    P+ DAI  +S  
Sbjct: 179 VALLDARGFGPEDFARSHPGGSLGRRLLTHVRDVMRADDKVPAVTPATPITDAIIAMSRG 238

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G VA+ D    + GI T+GD+ R F K  DL    +  VM   P+ I  D L   A++
Sbjct: 239 GLGLVAITDPANIVLGIFTDGDLRRAFEKRIDLQQGDIASVMHAAPRTIGPDRLAVEAVE 298

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ +  I+ L+VVD     IG ++  DL    +I
Sbjct: 299 MMERLRINALLVVDAENHLIGALNMHDLFTAKVI 332


>gi|94309252|ref|YP_582462.1| KpsF/GutQ family protein [Cupriavidus metallidurans CH34]
 gi|93353104|gb|ABF07193.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
          Length = 327

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 195/324 (60%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A +++  E   +S+L     G L+  F  AVE I    GRVV++GIGKSGHIG 
Sbjct: 8   DRALRLARQTLEIEAEAVSALA----GRLTPAFTTAVEMILGCTGRVVVSGIGKSGHIGR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFFVH AEASHGDLGMITRDD++I  S SG + EL AI+   +R    
Sbjct: 64  KVAATLASTGTPSFFVHPAEASHGDLGMITRDDVLIAFSNSGETAELLAIIPIVKRIGAG 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI+IT   +S +A  ++  L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LISITGNAESNLAKLSNAHLDGAVAQEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E+DF   HPGG LG        DVM +G+++P V+   PL  A+  ++ K     AVVD 
Sbjct: 184 EDDFARSHPGGALGRKLLTHVRDVMRTGNAVPAVRESTPLAQALMEITRKGMAMTAVVDP 243

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  G+ T+GD+ R     +D  T+ + +VM +NP  +  D L   A+Q++  + I+ L
Sbjct: 244 DGRAVGVFTDGDLRRLLETPRDWKTVPIGEVMHRNPHTVHLDKLAVEAVQIMETNRINQL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVDD     G +H  DL R  +I
Sbjct: 304 LVVDDDGHLAGALHIHDLTRAKVI 327


>gi|325134933|gb|EGC57565.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M13399]
 gi|325141001|gb|EGC63507.1| arabinose 5-phosphate isomerase [Neisseria meningitidis CU385]
 gi|325199546|gb|ADY95001.1| arabinose 5-phosphate isomerase [Neisseria meningitidis H44/76]
          Length = 326

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   + AE  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHAEAEGL----REIAAELDKNFVLAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|261211084|ref|ZP_05925373.1| arabinose 5-phosphate isomerase [Vibrio sp. RC341]
 gi|260839585|gb|EEX66196.1| arabinose 5-phosphate isomerase [Vibrio sp. RC341]
          Length = 324

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 132/321 (41%), Positives = 196/321 (61%), Gaps = 9/321 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLA 83
             A + +  E + L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A
Sbjct: 9   DVAKQVLRTEIQALQQLEQYINTD----FANACTTILANQTGKVVVMGMGKSGHIGKKIA 64

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I+
Sbjct: 65  ATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVIS 124

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  D
Sbjct: 125 MTGNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAED 184

Query: 204 FYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   
Sbjct: 185 FALSHPGGALGRKLLLKLNDIMHSGEALPKVAPQALIRDALLEISQKGLGMTAVVDEDDT 244

Query: 263 LKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L++   I+ LM+V
Sbjct: 245 LLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV 304

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
            +  K +G ++  DLL+ G++
Sbjct: 305 -ENNKLVGALNMHDLLKAGVM 324


>gi|59710999|ref|YP_203775.1| D-arabinose 5-phosphate isomerase [Vibrio fischeri ES114]
 gi|197335082|ref|YP_002155149.1| sugar isomerase, KpsF/GutQ family [Vibrio fischeri MJ11]
 gi|59479100|gb|AAW84887.1| D-arabinose 5-phosphate isomerase [Vibrio fischeri ES114]
 gi|197316572|gb|ACH66019.1| sugar isomerase, KpsF/GutQ family [Vibrio fischeri MJ11]
          Length = 324

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 197/320 (61%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E   L+ L + +  +    F  A + +   K +VV+ G+GKSGHIG+K+A+
Sbjct: 9   KAGKNVLQIEIDALTQLSNYINDD----FTKACQLMLECKQKVVVMGMGKSGHIGNKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMI + D++I +S SG + E+ A+L   +R  I LI +
Sbjct: 65  TLASTGTPSFFVHPGEASHGDLGMIEKGDIVIAISNSGEASEILALLPVIKRLGITLITM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  AD+ L +    E+CP GLAPT+S    LA+GDA A+ALL++R F+ +DF
Sbjct: 125 TGKPESSMAKVADVNLQITVPQEACPLGLAPTSSTTATLAMGDAFAVALLQARGFTADDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD +P+V     +  A+  +SEK  G  A+VD  QK+
Sbjct: 185 ALSHPGGALGRKLLLLLSDIMHTGDELPMVTADALIKTALLEVSEKGLGMTAIVDNEQKV 244

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R      D++T ++ +VM  +P V   + L    + L++   I+ L++ D
Sbjct: 245 IGIFTDGDLRRLLDNKIDIHTQTIGEVMTHSPAVANPNLLAVEGLNLMQDKKINGLLLCD 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G ++  DLL+ G++
Sbjct: 305 ETHRLVGALNMHDLLKAGVM 324


>gi|262170536|ref|ZP_06038214.1| arabinose 5-phosphate isomerase [Vibrio mimicus MB-451]
 gi|261891612|gb|EEY37598.1| arabinose 5-phosphate isomerase [Vibrio mimicus MB-451]
          Length = 324

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 195/319 (61%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLRTEIAALQQLEQYINAD----FASACATILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+K  G  AVVDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQKGLGMTAVVDEQDTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGLNLMQAKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 DNKLVGALNMHDLLKAGVM 324


>gi|322418947|ref|YP_004198170.1| KpsF/GutQ family protein [Geobacter sp. M18]
 gi|320125334|gb|ADW12894.1| KpsF/GutQ family protein [Geobacter sp. M18]
          Length = 321

 Score =  342 bits (878), Expect = 4e-92,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 190/323 (58%), Gaps = 9/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A R I  E   L +LESS+       F  AVE I    GRVV+TG+GKSG IG K+
Sbjct: 2   ILEEAKRVIRVEAEALLNLESSIDRT----FEKAVEMILNTSGRVVVTGMGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    LI
Sbjct: 58  ASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVRILPIIKRLGASLI 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F   
Sbjct: 118 AMAGNPNSTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKAE 177

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG    +   D+MHSGD +PLV     + +A+  ++ K  G   V     
Sbjct: 178 DFAMFHPGGALGRRLLLKVEDIMHSGDGLPLVSSDTLMREALFTITSKGLGITGVTSADG 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L G+IT+GD+ R   +  D+ +L    +M K PK I  D L   A+Q + Q++I+ L V
Sbjct: 238 ALIGVITDGDLRRALGQGLDIISLPASALMKKGPKRIRRDELAARALQQMEQYSITSLFV 297

Query: 320 VDDCQ--KAIGIVHFLDLLRFGI 340
             D Q    +GIVH  DLL+ GI
Sbjct: 298 FADDQAPAPVGIVHLHDLLKAGI 320


>gi|74316556|ref|YP_314296.1| capsule expression protein KpsF/GutQ [Thiobacillus denitrificans
           ATCC 25259]
 gi|74056051|gb|AAZ96491.1| capsule expression protein KpsF/GutQ [Thiobacillus denitrificans
           ATCC 25259]
          Length = 328

 Score =  342 bits (878), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 135/329 (41%), Positives = 192/329 (58%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            SL    ++  A + +  E   L     ++   L   F  AV  I A  GRVV++G+GKS
Sbjct: 4   QSLSAEHSLALARQVLEIEADALH----TVSTRLDHGFADAVRLILACTGRVVVSGMGKS 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+GSK+A+TLASTGTP+FF+H  EASHGDLGMI  DD+++ LS SG S E+  I+   +
Sbjct: 60  GHVGSKIAATLASTGTPAFFMHPGEASHGDLGMIAHDDVVLALSNSGESSEIVCIVPLIK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    L+A+T    S +A  AD  L    + E+CP  LAPT S    LA+GDALA+ALL+
Sbjct: 120 RRGAKLVAMTGNPASTLAREADAHLNAKVDKEACPLNLAPTASTTAALALGDALAVALLD 179

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R FS +DF   HPGG LG    V  +DVMH GD++P V     L  A+  +++K  G  
Sbjct: 180 ARGFSADDFARTHPGGSLGRRLLVHVADVMHGGDALPKVGRDATLKAALFEMTKKGLGMT 239

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AVVD   ++ G+ T+GD+ R      D+    + D+M  NPK I  D L   A++ +   
Sbjct: 240 AVVDADDRVVGLFTDGDLRRTLEHALDIQHAKIADLMTPNPKTIRADELAAAAVEKMETL 299

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I+ L+VVD   + +G ++  DLL+ G++
Sbjct: 300 KINGLLVVDADNRLVGALNMHDLLKAGVV 328


>gi|148652631|ref|YP_001279724.1| KpsF/GutQ family protein [Psychrobacter sp. PRwf-1]
 gi|148571715|gb|ABQ93774.1| KpsF/GutQ family protein [Psychrobacter sp. PRwf-1]
          Length = 332

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 130/325 (40%), Positives = 197/325 (60%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++ A+ +I  E+  L  L   L       F  A E I+  KGRVV+TG+GKSGHIG 
Sbjct: 11  EQYIKYAVDAIRTEQAALQLLIEQLDER----FVEACELIRNCKGRVVVTGMGKSGHIGR 66

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTG+PSFF+H  EA HGDLGM+   D+++ +S SG SDE+K +L   ++ +IP
Sbjct: 67  KIAATFASTGSPSFFMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTLLPVVKQLAIP 126

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI+I+ + + ++   AD+ LTL    E+CP GLAPT+S    LA+GDA+A+AL+ +R+F+
Sbjct: 127 LISISRDKRGMLPKSADVALTLGASEEACPLGLAPTSSTTATLALGDAIAVALVHARHFT 186

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGD---SIPLVKIGCPLIDAITILSEKRFGCVAV 256
             DF + HP G LG    +  SD+MH       +PLV     L  A+ +++  R G   V
Sbjct: 187 SEDFALSHPAGALGRKLLMRVSDLMHQAQKDLQLPLVSTDTTLHQALFVMTNGRLGMAVV 246

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           ++E  K+ GI T+GD+ R   K ++    +  +M  NPK I +D   + A+ L+ +  IS
Sbjct: 247 MEEAHKVVGIFTDGDLRRALEKHIDLQTPMSQIMTPNPKQISKDMRASDALSLMNEKAIS 306

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+VVD+ Q+  G++   DLL+ G+
Sbjct: 307 QLLVVDEQQQLEGVISIHDLLQAGV 331


>gi|83941911|ref|ZP_00954373.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
 gi|83847731|gb|EAP85606.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. EE-36]
          Length = 320

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E + L  L  SL       F  A++ + A +GRV++TGIGKSGHI
Sbjct: 1   MTTPFLDTARRVIRTEAQALEQLADSLDDR----FRQAIDLLVATRGRVIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGMIT DD+++ +S SG + EL  ++ Y+RRFS
Sbjct: 57  AKKIAATLASTGTPAQFVHPAEASHGDLGMITGDDVVLAISNSGEAPELANLIAYSRRFS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS  +S +    D+VL LP+  E+C  G+ P+TS  M LA+GDA+AIAL+E+R 
Sbjct: 117 IPLIGITSRAQSSLGAQCDVVLELPQLAEACGTGVVPSTSTTMTLAMGDAVAIALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH+GD++PLV++  P+ DA+  +S K FG V V D
Sbjct: 177 FTAEHFREFHPGGKLGARLSRVADLMHTGDALPLVQVDAPMSDALMAMSSKSFGVVIVTD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GIIT GD+ R+    L + +  +VM   P  +  D L   A+ ++    I+ L+
Sbjct: 237 SNGALAGIITSGDLGRHLE-GLMSKTAREVMTPTPVTVAPDALAEKAVGIMNARKITCLL 295

Query: 319 VVD--DCQKAIGIVHFLDLLRFGI 340
           V+D        G++H  D LR G+
Sbjct: 296 VLDPAQGDVPAGLLHIHDCLRVGL 319


>gi|107023719|ref|YP_622046.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
 gi|116690806|ref|YP_836429.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
 gi|105893908|gb|ABF77073.1| KpsF/GutQ family protein [Burkholderia cenocepacia AU 1054]
 gi|116648895|gb|ABK09536.1| KpsF/GutQ family protein [Burkholderia cenocepacia HI2424]
          Length = 327

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALSDQLDG----GFVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT    S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAGSSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM SGD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDA 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GI T+GD+ R   +  D  TL + +VM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 DGKVAGIFTDGDLRRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGALIGALNMHDLFSKKVI 327


>gi|254465340|ref|ZP_05078751.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium Y4I]
 gi|206686248|gb|EDZ46730.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium Y4I]
          Length = 322

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 136/322 (42%), Positives = 196/322 (60%), Gaps = 7/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +  A + I  E + L++L   L       F  AV+ I   KGR++++GIGKSGHIG 
Sbjct: 5   EKFLVTARQVITDEAQALNALAEGLDER----FAEAVQLILQAKGRIIVSGIGKSGHIGH 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP++FVH AEASHGDLGM++  D+++ +S SG + EL  +L + RRFSIP
Sbjct: 61  KIAATLASTGTPAYFVHPAEASHGDLGMLSEGDVVLAISNSGEAPELANLLAFTRRFSIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++S+  S +   AD+ L +P   E+C  G+ P+ S  + LA+GDALAIAL++ R+F 
Sbjct: 121 LIGLSSKMDSTLMKQADVHLQIPSLGEACGFGMVPSISTTLTLAMGDALAIALMKHRDFR 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG       D+MH+GD++PLV    P+ DA+  +S+K FG   V    
Sbjct: 181 PENFRDFHPGGKLGAQLSKVRDLMHAGDALPLVSGDTPMADALIEISQKGFGVAGVAAAD 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GIIT+GD+ R+    L   +  +VM   P  I    +   A+ ++ Q  I+ L VV
Sbjct: 241 GSLAGIITDGDLRRHMD-GLLNKTAAEVMTAGPATIAPGAMAQEAVAVMNQRKITCLFVV 299

Query: 321 --DDCQKAIGIVHFLDLLRFGI 340
             D+ QKA G++H  D LR G+
Sbjct: 300 DPDNGQKAEGLLHIHDCLRAGL 321


>gi|292669893|ref|ZP_06603319.1| arabinose 5-phosphate isomerase [Selenomonas noxia ATCC 43541]
 gi|292648690|gb|EFF66662.1| arabinose 5-phosphate isomerase [Selenomonas noxia ATCC 43541]
          Length = 326

 Score =  342 bits (877), Expect = 5e-92,   Method: Composition-based stats.
 Identities = 130/330 (39%), Positives = 200/330 (60%), Gaps = 10/330 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K++  + A+ ++  E + ++ L   +  +    F  AV  I   K R+V+TG+GKSGH
Sbjct: 1   MAKSTIREKAIETLELEAKAVAQLTERIDDD----FEAAVRAILDCKARIVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T +D++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTENDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+    KS +   AD  + +  E E+CP GLAPT+S    LA+GDA+A+AL+E+R
Sbjct: 117 GARIIAMCGRRKSQLGRSADFYIDIGVEREACPLGLAPTSSTTATLAMGDAIAMALMEAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG    +  ++VMH+G+  P+V       DA+ ++++K  G  +V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGEENPVVSYNTTAKDALFVMTDKGLGAASV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD N     VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDANGKFIGLVTDGIIRRALAKDYNFLDKDVESIMFATPLTITPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL VVD+    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVVDETGIPVGIVHLTDLLRQGVV 326


>gi|264680856|ref|YP_003280766.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|299531899|ref|ZP_07045299.1| chloride channel protein [Comamonas testosteroni S44]
 gi|262211372|gb|ACY35470.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|298720074|gb|EFI61031.1| chloride channel protein [Comamonas testosteroni S44]
          Length = 333

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 194/323 (60%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A  ++  E   L ++   L G     F   V++I  + GRVV+ G+GKSGH+G K
Sbjct: 15  RALNLAREALDIEAAALRAMSVRLNG----AFTAVVQRILQLPGRVVVMGMGKSGHVGRK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGDLGM+T+DDL++ LS SG +DEL  +L   +R  +PL
Sbjct: 71  VAATLASTGTPSFFVHPAEASHGDLGMLTQDDLVLALSNSGETDELTGVLPAIKRMGVPL 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T   +S +A HAD VL    + E+CP  LAPT S   QLA+GDALA+ALL++R F  
Sbjct: 131 VAVTGGLQSTLAKHADWVLDTHVDKEACPLNLAPTASTTAQLAMGDALAVALLDARGFGA 190

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVM  G  +P V      +D +  +S K  GC AVV+  
Sbjct: 191 EDFARSHPGGALGRRLLTHVRDVMRRGVDVPQVAQDVSSVDLMREMSAKGLGCSAVVNAS 250

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI T+GD+ R      DL + + +DVM   P  I  D L   A +++ +H I+ ++
Sbjct: 251 GELVGIFTDGDLRRCVEAGVDLRSRTAQDVMHARPLTIKPDLLAVAAARMMEEHGITAVL 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V DD Q+  G+VH  DL+R  +I
Sbjct: 311 VADDNQRLQGVVHIRDLMRAKVI 333


>gi|83855387|ref|ZP_00948917.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
 gi|83843230|gb|EAP82397.1| arabinose 5-phosphate isomerase [Sulfitobacter sp. NAS-14.1]
          Length = 320

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 144/324 (44%), Positives = 200/324 (61%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A R I  E + L  L  SL       F  A++ + A +GRV++TGIGKSGHI
Sbjct: 1   MTTPFLDTARRVIRTEAQALEQLADSLDDR----FRQAIDLLVATRGRVIVTGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGMIT DD+++ +S SG + EL  ++ Y+RRFS
Sbjct: 57  AKKIAATLASTGTPAQFVHPAEASHGDLGMITGDDVVLAISNSGEAPELANLIAYSRRFS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ITS  +S +    D+VL LP+  E+C  G+ P+TS  M LA+GDA+AIAL+E+R 
Sbjct: 117 IPLIGITSRAQSSLGAQCDVVLELPQLSEACGTGVVPSTSTTMTLAMGDAVAIALMENRA 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH+GD++PLV++  P+ DA+  +S K FG V V D
Sbjct: 177 FTAEHFREFHPGGKLGARLSRVADLMHTGDALPLVQVDAPMSDALMAMSSKSFGVVIVTD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GIIT GD+ R+    L + +  +VM   P  +  D L   A+ ++    I+ L+
Sbjct: 237 SNGALAGIITSGDLGRHLD-GLMSKTAREVMTPTPVTVAPDALAEKAVGIMNARKITCLL 295

Query: 319 VVD--DCQKAIGIVHFLDLLRFGI 340
           V+D        G++H  D LR G+
Sbjct: 296 VLDPAQGDIPAGLLHIHDCLRVGL 319


>gi|254502653|ref|ZP_05114804.1| sugar isomerase, KpsF/GutQ family [Labrenzia alexandrii DFL-11]
 gi|222438724|gb|EEE45403.1| sugar isomerase, KpsF/GutQ family [Labrenzia alexandrii DFL-11]
          Length = 337

 Score =  342 bits (877), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 157/336 (46%), Positives = 225/336 (66%), Gaps = 1/336 (0%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
             S  +       + +    +  A R++  E  GLS+L  +L+  L+  F  A   I++I
Sbjct: 1   MTSPAQDPNTSESAELHMEYIVSAERALETEMAGLSALRVALKDGLAAPFQKACSLIQSI 60

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            GRV+++GIGKSGHIG+K+A++LASTGTP+FFVHA EASHGDLGMIT+DD+++ LSWSG 
Sbjct: 61  SGRVIVSGIGKSGHIGTKIAASLASTGTPAFFVHATEASHGDLGMITQDDVVLALSWSGE 120

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           + EL +++ Y RRF +PL+A+TS   S +   +DIVL LP   E+CPHGLAPTTSA++QL
Sbjct: 121 TQELASLVAYTRRFKVPLVAMTSRLDSTLGNASDIVLKLPSVAEACPHGLAPTTSALVQL 180

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           A+GDAL +ALLE R F+  D+ + HPGG+LG     A D+MHSG+++PLV    P+ D I
Sbjct: 181 ALGDALTVALLEGRGFTVQDYKLFHPGGRLGASLKSAKDIMHSGEALPLVTASTPMTDGI 240

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            ++S+K FG + VVDE  +L GIIT+GD+ R+   +L   +  D+M + PK +    L  
Sbjct: 241 VVMSQKGFGVLGVVDELNQLMGIITDGDLRRHVTTNLLEKTAGDIMTRGPKTVHPGALSA 300

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++LL   +I+ + VV+D  + +GIVH  DLLR G
Sbjct: 301 SILELLNSSSITTVFVVEDS-RPVGIVHMHDLLRVG 335


>gi|114564533|ref|YP_752047.1| KpsF/GutQ family protein [Shewanella frigidimarina NCIMB 400]
 gi|114335826|gb|ABI73208.1| KpsF/GutQ family protein [Shewanella frigidimarina NCIMB 400]
          Length = 325

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 200/320 (62%), Gaps = 6/320 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   + I  EK  L +L   +    S +F  A + I   KG+V++ G+GKSGHIG+K+++
Sbjct: 9   QWGRKVIDIEKAALDNLYQYVD---SVEFDQACQLIMQCKGKVIVMGMGKSGHIGNKISA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLG + ++D+++ +S SG S E+  ++   +R  +P+IA+
Sbjct: 66  TFASTGTPAFFVHPGEASHGDLGALAKNDIVLAISNSGESSEILTLMPVIQRMGVPVIAV 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  + I L +  + E+CP GLAPT+S    LA+GDALAIALL+++ F+ +DF
Sbjct: 126 TGKPDSNMARLSKIHLCIQVQEEACPLGLAPTSSTTATLAMGDALAIALLQAKGFTRDDF 185

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +   DVMH GD +P+V     + DA+  +S+K  G  AVVD   KL
Sbjct: 186 ALSHPGGSLGRKLLLKVDDVMHQGDDLPIVNDDICITDALYEISKKGLGMTAVVDHASKL 245

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R    D+N  T S+  VM KN        L   A+Q++ + +I+ L+VV+
Sbjct: 246 VGIFTDGDLRRVIDADVNLRTTSIAHVMTKNCVTSPAGILAAQALQIMDEKSINGLIVVN 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IG ++ LD+++ G+I
Sbjct: 306 EKHQPIGALNMLDMVKAGVI 325


>gi|78067585|ref|YP_370354.1| KpsF/GutQ family sugar isomerase [Burkholderia sp. 383]
 gi|77968330|gb|ABB09710.1| Sugar isomerase, KpsF/GutQ family [Burkholderia sp. 383]
          Length = 327

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----GFVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGTLADVNLNAAVSKEACPMNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM SGD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRSGDDVPSVGLDATLSDALFQITAKRLGMTAVVDA 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GI T+GD+ R   +  D  TL + DVM + P+ +  D L   A++L+ +H I+ +
Sbjct: 244 DGKVAGIFTDGDLRRVLARDGDFRTLPITDVMTRGPRTVAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGVLIGALNMHDLFSKKVI 327


>gi|160871668|ref|ZP_02061800.1| arabinose 5-phosphate isomerase [Rickettsiella grylli]
 gi|159120467|gb|EDP45805.1| arabinose 5-phosphate isomerase [Rickettsiella grylli]
          Length = 323

 Score =  341 bits (876), Expect = 6e-92,   Method: Composition-based stats.
 Identities = 135/326 (41%), Positives = 196/326 (60%), Gaps = 7/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +        A   I  E   + +L      +L  +F  A E     +G +V+ GIGKSGH
Sbjct: 1   MNTKKFSDSARNVIEIEANAILNLL----PQLDSKFERACELFLNCQGHIVVIGIGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG+K+A+TLASTG+P+FF+HAAEA+HGDLGMI   D+++ +S SG +DEL +IL   +  
Sbjct: 57  IGNKIAATLASTGSPAFFIHAAEANHGDLGMINSKDVVLAISHSGETDELISILPTLKFL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP I +T    S +A  A + L +P E E+C  GLAPT+S+   L +GDA+AIALL  R
Sbjct: 117 NIPFILMTGNPNSTLAQQATVTLHIPIEQEACSLGLAPTSSSTATLVMGDAIAIALLNRR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            FS NDF  +HP G LG    +  +D+MH+G ++P V+ G PLI  +  +S+KR G   +
Sbjct: 177 GFSSNDFAKVHPRGHLGRRLLLKVADIMHTGPALPNVRSGTPLIQTLFEISQKRLGMTII 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            DE Q+L GI T+GD+ R   + LN  +  V+ VM  + K I +D L T A+ L+    I
Sbjct: 237 TDENQRLLGIFTDGDLRRAIDQGLNLQTTLVDHVMTAHCKTINKDKLATEALHLMETSKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L++ D  +K +G+VH  D+L   I
Sbjct: 297 TTLIIADKEKKPLGVVHIHDILSRKI 322


>gi|325145147|gb|EGC67429.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240013]
          Length = 326

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 205/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   + AE  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHAEAEGL----REIAAELDKNFVLAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDGQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|170734131|ref|YP_001766078.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
 gi|206559211|ref|YP_002229972.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
           J2315]
 gi|169817373|gb|ACA91956.1| KpsF/GutQ family protein [Burkholderia cenocepacia MC0-3]
 gi|198035249|emb|CAR51124.1| putative arabinose 5-phosphate isomerase [Burkholderia cenocepacia
           J2315]
          Length = 327

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----GFVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT    S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAGSSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM SGD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRSGDDVPSVGLNATLSDALFQITAKRLGMTAVVDA 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GI T+GD+ R   +  D  TL + +VM ++P+ I  D L   A++L+ +H I+ +
Sbjct: 244 DGKVAGIFTDGDLRRVLARDGDFRTLPITEVMTRDPRTIAPDHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGALIGALNMHDLFSKKVI 327


>gi|159046128|ref|YP_001534922.1| arabinose-5-phosphate isomerase [Dinoroseobacter shibae DFL 12]
 gi|157913888|gb|ABV95321.1| arabinose-5-phosphate isomerase [Dinoroseobacter shibae DFL 12]
          Length = 320

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 192/325 (59%), Gaps = 8/325 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A R I  E  GL+ L + L       F  AV+ I + KGRV+++G+GKSGH
Sbjct: 1   MSTDTFLDIARRVIAVEAEGLAQLAAGL----DDSFARAVDTILSAKGRVIVSGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+T ASTGTP+ FVH AEASHGDLGM+   D+++VLS SG + EL  ++ Y RRF
Sbjct: 57  IARKMAATFASTGTPAHFVHPAEASHGDLGMMAAGDVVLVLSNSGETPELADLVAYTRRF 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLI + S   S +   +D+ L LPK PE+C  G+ PTTS  M LA+GDALA+AL+E R
Sbjct: 117 RIPLIGVASNPDSTLLRQSDVALVLPKAPEACGTGIVPTTSTTMTLALGDALAVALMEHR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            FS  +F   HPGGKLG       D+MH G  +PL+     + DA+  +S+K FG V V 
Sbjct: 177 EFSPQNFRDFHPGGKLGARLSKVGDLMHRGTELPLIAEDAAMGDALLEISQKGFGVVGVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                L G+IT+GD+ R+    L  L+  DVM ++P  I  D L   A+ ++    I+ L
Sbjct: 237 -RDGLLTGVITDGDLRRHMD-GLLGLAAGDVMTRDPLTITPDALAEEAVAVMNARKITCL 294

Query: 318 MVVDDCQ--KAIGIVHFLDLLRFGI 340
            VV +       G +H  D LR GI
Sbjct: 295 FVVPEDGPKAPAGFLHIHDCLRAGI 319


>gi|304386600|ref|ZP_07368888.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ATCC 13091]
 gi|304339429|gb|EFM05501.1| arabinose 5-phosphate isomerase [Neisseria meningitidis ATCC 13091]
          Length = 326

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 140/323 (43%), Positives = 204/323 (63%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG K
Sbjct: 8   KYLDWAREVLHTEAEGL----REIAAELDENFALAADALLHCKGRVVITGMGKSGHIGRK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I L
Sbjct: 64  MAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDITL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F+ 
Sbjct: 124 VCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAFTP 183

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D  
Sbjct: 184 DDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTDVQ 243

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ L+
Sbjct: 244 GRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTIAAERLATEALKVMQANHVNGLL 303

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V D     IG ++  DLL   I+
Sbjct: 304 VTDADGVLIGALNMHDLLAARIV 326


>gi|146278807|ref|YP_001168966.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145557048|gb|ABP71661.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 321

 Score =  341 bits (876), Expect = 7e-92,   Method: Composition-based stats.
 Identities = 146/324 (45%), Positives = 198/324 (61%), Gaps = 9/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A R I  E   LS L  SL       F  AVE I   +GRV+++G+GKSGHIG
Sbjct: 5   TTDFLATARRVIATEAEALSLLGDSL----GEAFGEAVEMILRARGRVIVSGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF I
Sbjct: 61  RKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDI 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI +    +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALAIAL+E R F
Sbjct: 121 PLIGVAGRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAIALMEHRQF 180

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +   F V HPGGKLG      SD+MH   ++PLV  G P+ +A+  +S   FG + V  +
Sbjct: 181 TPEHFRVFHPGGKLGARLAKVSDLMH--RNLPLVDAGTPMGEALITMSRLGFGVLGVTGQ 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L+G+IT+GD+ R+    L  L V+DVM +NP+ I  D L   A+  +    I+ L V
Sbjct: 239 DGRLEGVITDGDLRRHLD-GLLGLCVDDVMTRNPRTIAPDALAERAVAEMNARKITSLFV 297

Query: 320 VD--DCQKAIGIVHFLDLLRFGII 341
           VD      A G++H  D LR G++
Sbjct: 298 VDPEGSGAAAGLIHIHDCLRAGVV 321


>gi|237748915|ref|ZP_04579395.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes OXCC13]
 gi|229380277|gb|EEO30368.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes OXCC13]
          Length = 338

 Score =  341 bits (875), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 139/332 (41%), Positives = 196/332 (59%), Gaps = 3/332 (0%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           +   S+  +  ++ A  ++  E   L SL      E +  F  +V  +   KGRVV++G+
Sbjct: 7   KNKPSVDSDRMLKLADETLAIESHALESLRKRFIEEDAEHFIQSVTLLLNCKGRVVVSGM 66

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG K+A+TLASTGTP+ FVH  EA+HGDLGMIT DD+ I LS+SG ++EL +I  
Sbjct: 67  GKSGHIGRKIAATLASTGTPAMFVHPGEAAHGDLGMITHDDVFIALSYSGEANELMSIAP 126

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
             +R    LIA+T    S +A  AD+ L +  E E+CP  LAPT S    LA+GDALA+A
Sbjct: 127 IIKRMGTKLIAMTGRPDSSLAQLADVHLNVHVEKEACPLNLAPTASTTTTLALGDALAVA 186

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           +L++R F E+DF   HPGG LG   +   SDVM +GD +P+VK    L DA+  +++K  
Sbjct: 187 VLDARGFREDDFARSHPGGALGRKLLTLVSDVMRAGDDVPVVKADTLLYDALFEITKKGI 246

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
              AVVDE     G+ T+GD+ R   K    + L + DVM KNP+ I  D L   A+ ++
Sbjct: 247 AMTAVVDEAGHAIGVFTDGDLRRLIEKQQHFSNLVIRDVMSKNPRTISSDKLAAEAVSIM 306

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +  I+ L+V D+  K  G +H  DL    +I
Sbjct: 307 EKFRINQLLVTDNDGKLTGALHIHDLTEAKVI 338


>gi|237746782|ref|ZP_04577262.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes HOxBLS]
 gi|229378133|gb|EEO28224.1| arabinose 5-phosphate isomerase [Oxalobacter formigenes HOxBLS]
          Length = 338

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 134/336 (39%), Positives = 197/336 (58%), Gaps = 3/336 (0%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K V +    +     ++ A  ++  E   L +L      E +  F  +V  +   KGRVV
Sbjct: 3   KEVIKNKTPIDSGRLLKLADDTLKTEALALETLRKRFLEEDAEHFLESVSLLLNCKGRVV 62

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ++G+GKSGHIG K+A+TLASTGTP+ FVH AEA+HGDLGMIT DD+ I +S+SG + EL 
Sbjct: 63  VSGMGKSGHIGRKIAATLASTGTPAMFVHPAEAAHGDLGMITHDDVFIAISYSGEAGELM 122

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           AI    +R    LIA+T   +S +A  AD+ L +  E E+CP  LAPT S    LA+GDA
Sbjct: 123 AIAPIIKRMGTRLIAMTGRPRSSLAQLADVHLNVFVEKEACPLNLAPTASTTTTLALGDA 182

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILS 247
           +A+A+L++R F E+DF   HPGG LG   +   SD+M  GD +P+VK    L DA+  ++
Sbjct: 183 IAVAVLDARGFREDDFARSHPGGTLGRRLLTLVSDIMRKGDDVPVVKADTLLYDALFEIT 242

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +K     +VVD   +  G+ T+GD+ R   K  + + + ++DVM KNP+ I    L   A
Sbjct: 243 KKGIAMTSVVDNEGRAIGVFTDGDLRRLIEKQQNFSQIVIKDVMSKNPRTIAPGKLAAEA 302

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + ++ +  I+ L+V D   K +G +H  DL    +I
Sbjct: 303 VSMMEKFRINQLLVTDPNGKLVGALHIHDLTEAKVI 338


>gi|332978300|gb|EGK15028.1| arabinose 5-phosphate isomerase [Psychrobacter sp. 1501(2011)]
          Length = 332

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 126/335 (37%), Positives = 199/335 (59%), Gaps = 9/335 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +  +         ++ A  +I  E+  L  L   L       F  A E I+  +GRVV+T
Sbjct: 1   MKAEIQPPTPEQYLKYATDAIRTEQNALELLIEQLDDR----FVEACELIRNCQGRVVVT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+T ASTG+P+FF+H  EA HGDLGM+   D+++ +S SG SDE+K +
Sbjct: 57  GMGKSGHIGRKIAATFASTGSPAFFMHPGEAGHGDLGMLVAGDVLLAISNSGESDEIKTL 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   ++ SIPLI+I+ + + ++   AD+ LTL    E+CP GLAPT+S    LA+GDA+A
Sbjct: 117 LPVVKQLSIPLISISRDRRGMLPKSADVALTLGASEEACPLGLAPTSSTTATLALGDAIA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGD---SIPLVKIGCPLIDAITIL 246
           +AL+ +R+F+  DF + HP G LG    +  SD+MH  +    +PLV     L +A+ ++
Sbjct: 177 VALVHARHFTSEDFALSHPAGALGRKLLMRVSDLMHQSEKDLKLPLVSTDTSLHNALFVM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVA 305
           +  R G   VVD+  ++ GI T+GD+ R   K ++    + ++M  NPK + +    + A
Sbjct: 237 TNGRLGMAVVVDDENRVVGIFTDGDLRRCLEKHIDLETPMSEIMTPNPKQVSKTMRASDA 296

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L+ +  IS L++VD+ Q+  G++   DLL  G+
Sbjct: 297 LSLMNEKAISQLLIVDENQQLEGVISIHDLLHAGV 331


>gi|59801937|ref|YP_208649.1| KpsF [Neisseria gonorrhoeae FA 1090]
 gi|59718832|gb|AAW90237.1| putative polysialic acid capsule expression protein [Neisseria
           gonorrhoeae FA 1090]
          Length = 351

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 140/333 (42%), Positives = 207/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   +  E  GL      +  EL   F  A + +   KGRVVITG
Sbjct: 23  QRRMAMAENEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITG 78

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+
Sbjct: 79  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAII 138

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+
Sbjct: 139 PALKRKDITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAV 198

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK 
Sbjct: 199 VLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKG 258

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D    LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 259 LGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 318

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D      G ++  DLL   I+
Sbjct: 319 MQANHVNGLLVTDADGVLTGALNMHDLLAARIV 351


>gi|221200002|ref|ZP_03573045.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
 gi|221206843|ref|ZP_03579855.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
 gi|221173498|gb|EEE05933.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2]
 gi|221180241|gb|EEE12645.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD2M]
          Length = 327

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----SFAHAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTPDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRTGDDVPYVGLDATLSDALFQITAKRMGMTAVVDT 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +K+ GI T+GD+ R   +  D   L + DVM + P+ I  D L   A++L+ +H I+ +
Sbjct: 244 NRKVAGIFTDGDLRRVLARDGDFRRLPIADVMTREPRTIGADHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGVLIGALNMHDLFSKKVI 327


>gi|260779437|ref|ZP_05888328.1| arabinose 5-phosphate isomerase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260604527|gb|EEX30827.1| arabinose 5-phosphate isomerase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 321

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 126/320 (39%), Positives = 193/320 (60%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+  +  +    F  A E I A K G+V + G+GKSGHIG+K+A+
Sbjct: 7   AALDVLKTEIEALEQLDQYINDD----FVQACELILANKEGKVAVMGMGKSGHIGNKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           +LASTGT +FFVH  EA+HGDLGMI   D+++ +S SG S E+  +    +R +I +I++
Sbjct: 63  SLASTGTSAFFVHPGEAAHGDLGMIEPGDIVLAISNSGESSEILGLFPVLKRLNIKIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  +D  L +    E+CP GLAPT S    LA+GDALA+ALL++R F+  DF
Sbjct: 123 TGKPESNMAKLSDYHLQITVPKEACPLGLAPTASTTATLAMGDALAVALLQARGFTAEDF 182

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+G+ +PLV     + +A+  +S+K  G  AVVD  Q L
Sbjct: 183 ALSHPGGALGRKLLLKLSDIMHTGEQLPLVTPDTVVREALLEISQKGLGMTAVVDGHQHL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D+++  + +VM  NP     + L    + L++Q +I+ L++  
Sbjct: 243 VGIFTDGDLRRILDKRIDIHSALIGEVMTTNPTTASPNILAAEGLNLMQQKSINGLILC- 301

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  DLL+ G++
Sbjct: 302 LDGKVVGALNMHDLLKAGVM 321


>gi|332970451|gb|EGK09443.1| arabinose 5-phosphate isomerase [Kingella kingae ATCC 23330]
          Length = 321

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 135/326 (41%), Positives = 199/326 (61%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +  A +++  E + ++ +  +L  +    F  A   I    GR ++ G+GKSGHI
Sbjct: 1   MNHQYLTWAQQALSIEAQSIAEISQNLGDD----FVQAALAILNCTGRTIVMGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA+HGDLGMI  +D+++ LS SG SDE+ AIL   +R  
Sbjct: 57  GRKIAATLASTGTPAFFVHPAEAAHGDLGMILDNDVVLALSNSGESDEILAILPALKRKH 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI ITS  +S +A +ADI +      E+CP GLAPT+S    LA+GDALAI LL++R 
Sbjct: 117 TTLICITSNPQSSMARYADIHIQAKVSQEACPLGLAPTSSTTAVLALGDALAIVLLKARQ 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HP G LG    +   D+MH GD++P V    PL DAI  +SEK  G V ++
Sbjct: 177 FTPEDFALSHPAGNLGRRLLLTVRDLMHQGDALPAVLQHTPLRDAILTMSEKGLGMVGII 236

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           DE   L G+ T+GD+ R F  H+ +   ++++VM   P  I  D L + A++L++   I+
Sbjct: 237 DEQSSLHGVFTDGDLRRLFAQHERVGIFTIDEVMKTQPCTISPDKLASEALKLMQDKRIN 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V  +  K +G ++  DLL+  +I
Sbjct: 297 GLLVC-EHGKLVGALNMYDLLKARVI 321


>gi|294675671|ref|YP_003576286.1| arabinose 5-phosphate isomerase [Rhodobacter capsulatus SB 1003]
 gi|294474491|gb|ADE83879.1| arabinose 5-phosphate isomerase [Rhodobacter capsulatus SB 1003]
          Length = 318

 Score =  341 bits (874), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 143/317 (45%), Positives = 201/317 (63%), Gaps = 8/317 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A R I  E  GL++L  SL G     F  AV+ I + +GRV+++G+GKSGHI  K+A+
Sbjct: 10  KTARRVIEIEIAGLTALAESLDG----AFGAAVQMILSARGRVIVSGMGKSGHIARKIAA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+TR+D+ +VLS SG + EL  ++ + RRFSIPLI +
Sbjct: 66  TLASTGTPAQFVHPAEASHGDLGMVTREDVALVLSNSGETPELADLIAHTRRFSIPLIGV 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
            +   S +   AD+ L LP+  E+C  G+ PTTS  M LA+GDALA+AL+E R F+   F
Sbjct: 126 AARPDSTLLRQADVALVLPQAVEACGTGVVPTTSTTMTLALGDALAVALMEHRQFTPEHF 185

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGGKLG      +D+MH    +PLV    P+ +A+ I+S+K FG V V D G +L 
Sbjct: 186 RTFHPGGKLGAKLSKVADLMH--RDMPLVTGTTPMPEALLIISQKGFGVVGVTDAGGRLI 243

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+    L + SV +VM + P+ I    L   A+ ++    I+ L  V +  
Sbjct: 244 GIVTDGDLRRHMD-GLLSRSVAEVMTRTPRTIAPTALAEAAVAVMNDCKITCLFAV-EDG 301

Query: 325 KAIGIVHFLDLLRFGII 341
           K +GI+H  D LR G++
Sbjct: 302 KPVGILHIHDCLRAGVV 318


>gi|323491747|ref|ZP_08096924.1| arabinose 5-phosphate isomerase [Vibrio brasiliensis LMG 20546]
 gi|323314003|gb|EGA67090.1| arabinose 5-phosphate isomerase [Vibrio brasiliensis LMG 20546]
          Length = 321

 Score =  340 bits (873), Expect = 1e-91,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 198/320 (61%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+  +  +    F  A E I A K G+VV+ G+GKSGHIG+K+A+
Sbjct: 7   AALEVLQTEVEALKQLDQYINDD----FINACELILANKDGKVVVMGMGKSGHIGNKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH  EA+HGDLGMI   D+++ +S SG S E+  +    +R +I +I++
Sbjct: 63  TLASTGTSSFFVHPGEAAHGDLGMIEPGDVVLAISNSGESSEILGLFPVLKRLNIKIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + KS +A  +DI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF
Sbjct: 123 TGKPKSNMAKLSDIHLQITVPKEACPIQLAPTSSTTATLVMGDALAMALMQARGFTAEDF 182

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GDS+PLV     + DA+  +S+K  G  AVVD+ Q+L
Sbjct: 183 AMSHPGGALGRKLLLKLADIMHTGDSLPLVTPSTVVRDALLEISQKGLGMTAVVDDHQQL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D++T  + DVM  NP     + L    + L++  +I+ L++ +
Sbjct: 243 IGIFTDGDLRRILDKRIDIHTALIGDVMTVNPTTAEPNMLAAEGLNLMQDKSINGLVLCE 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  K +G ++  DLL+ G++
Sbjct: 303 E-GKVVGALNMHDLLKAGVM 321


>gi|84387812|ref|ZP_00990827.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio splendidus 12B01]
 gi|84377327|gb|EAP94195.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Vibrio splendidus 12B01]
          Length = 323

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 128/318 (40%), Positives = 192/318 (60%), Gaps = 8/318 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E  GL+ L+     +    F  A + I   KG+VV+ G+GKSGHIG K+A+TL
Sbjct: 11  AKQVLETEVAGLTQLDQYFNDD----FCNACDLILNNKGKVVVMGMGKSGHIGKKIAATL 66

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGT +FFVH  EA+HGDLGMI   D++I +S SG S E+ ++    +R +I +I++T 
Sbjct: 67  ASTGTSAFFVHPGEAAHGDLGMIGAGDVVIAISNSGESGEILSLFPVLKRLNIKIISMTG 126

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +A  +DI L +    E+CP GLAPTTS    L +GDALA+ALL++R F+  DF +
Sbjct: 127 KPASNMATLSDIHLQISVPEEACPLGLAPTTSTTATLVMGDALAVALLQARGFTAQDFAL 186

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HPGG LG    +   D+MH+GD++P+V     + DA+  +S+K  G  AVV E   + G
Sbjct: 187 SHPGGALGRQLLLKLEDIMHTGDALPVVAPEALVRDALLEISQKGLGMTAVVGEDGLMAG 246

Query: 266 IITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I T+GD+ R   K  D++   + DVM  NP V   + L    + L++  +I+ LM+    
Sbjct: 247 IFTDGDLRRILDKRIDIHDTQIGDVMTLNPTVAEPNMLAVEGLNLMQAKSINGLMLC-HE 305

Query: 324 QKAIGIVHFLDLLRFGII 341
            K +G ++  DLL+ G++
Sbjct: 306 GKLVGALNMHDLLKAGVM 323


>gi|163733025|ref|ZP_02140469.1| arabinose 5-phosphate isomerase [Roseobacter litoralis Och 149]
 gi|161393560|gb|EDQ17885.1| arabinose 5-phosphate isomerase [Roseobacter litoralis Och 149]
          Length = 320

 Score =  340 bits (873), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 142/324 (43%), Positives = 197/324 (60%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M       A R I  E   L  LE S+       F  AV+ + A  GR+++ G+GKSGHI
Sbjct: 1   MSQVFQDTARRVIRIEIDALQQLEQSI----DDSFAKAVDLMIAATGRIIVCGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGM+   D++IVLS SG + EL  ++ Y RRF+
Sbjct: 57  ARKIAATLASTGTPAHFVHPAEASHGDLGMMGAGDVVIVLSNSGETPELADVIAYTRRFA 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I + S  +S +   +D+ L LP+  E+C  G+ PT+S  M LA+GDALA+AL+E R 
Sbjct: 117 IPMIGVASRPESTLLRQSDVALILPRAQEACGTGIVPTSSTTMTLALGDALAVALMEHRQ 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+   F   HPGGKLG      +D+MH+GD++P+V    P+ DA+  + +K FG VAV D
Sbjct: 177 FTPEHFRNFHPGGKLGAQLSKVADLMHTGDAVPVVSGNAPMSDALREIGQKGFGVVAVSD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
              +L+GIIT GDI R+    L +    +VM  +P  I  D L   A+ ++    I+ L+
Sbjct: 237 PQGRLQGIITNGDISRHMD-GLASFEANNVMTPSPITITPDALAEQAVGIMNDKKITCLL 295

Query: 319 VVDDC--QKAIGIVHFLDLLRFGI 340
           VVD    QK IG++H  D LR G+
Sbjct: 296 VVDPEVPQKLIGLIHIHDCLRVGL 319


>gi|313199985|ref|YP_004038643.1| kpsf/gutq family protein [Methylovorus sp. MP688]
 gi|312439301|gb|ADQ83407.1| KpsF/GutQ family protein [Methylovorus sp. MP688]
          Length = 332

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 191/325 (58%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A   ++ E R + +L   L       F  AVE I   +GR+V+TG+GKSGHIG
Sbjct: 12  SKTPIDLAREVLLIEAREVEALARRL----DDSFTRAVELILQCQGRIVVTGMGKSGHIG 67

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+T ASTGTP+FFVH AEASHGDLGMIT  D++I LS SG +DEL+ IL   +R   
Sbjct: 68  NKIAATFASTGTPAFFVHPAEASHGDLGMITGKDVVIALSNSGEADELRVILPTLKRMGA 127

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI+IT   +S +   AD+ L      E+CP  LAPT S    LA+GDALAIA+++ R F
Sbjct: 128 RLISITGHPQSTLGKAADVSLDAHVTEEACPLALAPTASTTASLALGDALAIAVMDQRGF 187

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S  +F + HPGG LG    +   DVM +GD+IP V +   L + +  +S K  G  A+VD
Sbjct: 188 SAEEFALSHPGGTLGRKLLLHVRDVMRTGDAIPSVGVEASLKEGLLEMSRKGLGMTAIVD 247

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             Q   G+ T+GD+ R F    D+N+  + DVM  +P+ I  + L   A+ ++ Q  I+ 
Sbjct: 248 AEQHAVGVFTDGDLRRAFENAVDINSTYMRDVMHTSPQQIRPEQLAVDAVAIMEQKKITS 307

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D     IG ++  DLL   ++
Sbjct: 308 LLVTDQQGTLIGALNMHDLLIAKVV 332


>gi|261250140|ref|ZP_05942716.1| arabinose 5-phosphate isomerase [Vibrio orientalis CIP 102891]
 gi|260939256|gb|EEX95242.1| arabinose 5-phosphate isomerase [Vibrio orientalis CIP 102891]
          Length = 321

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 131/320 (40%), Positives = 197/320 (61%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L  L+  L  +    F  A E I A K G+VV+ G+GKSGHIG+K+A+
Sbjct: 7   AALEVLETEIEALEQLDQYLNQD----FVAACESIIANKDGKVVVMGMGKSGHIGNKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH  EA+HGDLGMI   D+++ +S SG S E+ A+    +R +I +I++
Sbjct: 63  TLASTGTSSFFVHPGEAAHGDLGMIDPGDIVLAISNSGESGEILALFPVLKRLNIKIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A  +DI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF
Sbjct: 123 TGKPNSNMAKLSDIHLQITVPKEACPIQLAPTSSTTATLVMGDALAMALMQARGFTSEDF 182

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+G ++PLV     + DA+  +S+K  G  AVVD+ Q+L
Sbjct: 183 ALSHPGGALGRKLLLKLADIMHTGSALPLVTPTTVVRDALLEISQKGLGMTAVVDDHQQL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D+++  + DVM  NP V   + L    + L++  +I+ L++ D
Sbjct: 243 VGIFTDGDLRRILDKRIDIHSALIGDVMTVNPTVAEPNMLAAEGLNLMQDKSINGLILCD 302

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  DLL+ G++
Sbjct: 303 -QGKVVGALNMHDLLKAGVM 321


>gi|268597175|ref|ZP_06131342.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae FA19]
 gi|268550963|gb|EEZ45982.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae FA19]
          Length = 332

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 207/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   +  E  GL      +  EL   F  A + +   KGRVVITG
Sbjct: 4   QRRMAMAENEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITG 59

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+
Sbjct: 60  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAII 119

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +      E+CP GLAPTTS    +A+GDALA+
Sbjct: 120 PALKRKDITLVCITARPDSTMARHADIHIPASVSQEACPLGLAPTTSTTAVMALGDALAV 179

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK 
Sbjct: 180 VLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKG 239

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D    LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 240 LGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 299

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D      G ++  DLL   I+
Sbjct: 300 MQANHVNGLLVTDADGVLTGALNMHDLLAARIV 332


>gi|269213816|ref|ZP_05982911.2| arabinose 5-phosphate isomerase [Neisseria cinerea ATCC 14685]
 gi|269145443|gb|EEZ71861.1| arabinose 5-phosphate isomerase [Neisseria cinerea ATCC 14685]
          Length = 326

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 6   NEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+  I+   +R  I
Sbjct: 62  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAVIIPALKRKDI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 122 TLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D
Sbjct: 182 TPDDFALSHPAGSLGKRLLLRVADIMHKGCGLPAVRLGTPLKEAIVSMSEKGLGMLAVTD 241

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 242 GQCRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNG 301

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D      G ++  DLL   I+
Sbjct: 302 LLVTDADGVLTGALNMHDLLAARIV 326


>gi|167645173|ref|YP_001682836.1| KpsF/GutQ family protein [Caulobacter sp. K31]
 gi|167347603|gb|ABZ70338.1| KpsF/GutQ family protein [Caulobacter sp. K31]
          Length = 323

 Score =  340 bits (872), Expect = 2e-91,   Method: Composition-based stats.
 Identities = 148/320 (46%), Positives = 202/320 (63%), Gaps = 6/320 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +    R + AE   L+   ++L       F  AVE +   KGRVV TGIGKSGH+  K
Sbjct: 10  DAIAVGQRVLNAEAEALTQQSAAL----DESFVRAVEALFDAKGRVVCTGIGKSGHVARK 65

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTG+P+ FVHAAEASHGDLGMI + D+++ LS SG + EL   L YA+RFSIPL
Sbjct: 66  IAATLASTGSPAMFVHAAEASHGDLGMIGQGDVVLALSKSGEARELSDSLAYAKRFSIPL 125

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT+   S +   ADI+L LP  PE+     APTTS  +Q+A+GDALA+ALLE R F+ 
Sbjct: 126 IAITAVADSQLGRAADILLLLPDAPEATAEVNAPTTSTTLQMALGDALAVALLERRGFTA 185

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF V HPGGKLG +     D+MH  D +PL++    + + + ++SEKRFG V VV    
Sbjct: 186 SDFRVFHPGGKLGAMLRTVGDLMHGHDELPLIREAAAMSETLLVMSEKRFGAVGVVATDG 245

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L G+IT+GD+ R+    L T +  +VM + P  I    L   A++L+ +  I+VL VV 
Sbjct: 246 TLSGLITDGDLRRHMD-GLMTHTAGEVMTRAPLTIAPGALAAEALKLMNERRITVLFVV- 303

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +GI+H  DLLR G+I
Sbjct: 304 EQNRPVGILHVHDLLRAGVI 323


>gi|241760830|ref|ZP_04758921.1| sugar isomerase, KpsF/GutQ family [Neisseria flavescens SK114]
 gi|241318727|gb|EER55279.1| sugar isomerase, KpsF/GutQ family [Neisseria flavescens SK114]
          Length = 324

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 206/321 (64%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E  GL  + ++L  +    F  A E +   KGRVVITG+GKSGHIG K+A
Sbjct: 8   LDWARDVLDTEAEGLREIAAALDHD----FVRAAEALLHCKGRVVITGMGKSGHIGRKMA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI 
Sbjct: 64  ATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLIC 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +A HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +D
Sbjct: 124 ITAHPTSTMARHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDD 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G LG  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +
Sbjct: 184 FALSHPAGSLGKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGR 243

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKG+ T+GD+ R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV
Sbjct: 244 LKGVFTDGDLRRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++    IG ++  DLL   I+
Sbjct: 304 EENGVLIGALNMHDLLMARIV 324


>gi|240081064|ref|ZP_04725607.1| KpsF [Neisseria gonorrhoeae FA19]
          Length = 324

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 4   NEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I
Sbjct: 60  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIIPALKRKDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +      E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 120 TLVCITARPDSTMARHADIHIPASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D
Sbjct: 180 TPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 240 GQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNG 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D      G ++  DLL   I+
Sbjct: 300 LLVTDADGVLTGALNMHDLLAARIV 324


>gi|156307374|ref|XP_001617622.1| hypothetical protein NEMVEDRAFT_v1g157171 [Nematostella vectensis]
 gi|156194880|gb|EDO25522.1| predicted protein [Nematostella vectensis]
          Length = 287

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 132/287 (45%), Positives = 187/287 (65%), Gaps = 3/287 (1%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           E I A KGRVV+ G+GKSGH+G+K+A+TLASTGT +FFVH AEASHGD+GMITRDD+++ 
Sbjct: 1   ELILASKGRVVVVGMGKSGHVGNKIAATLASTGTTAFFVHPAEASHGDMGMITRDDVVLA 60

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           LS SGS+ E+  +L   +R  I LI++T   +S +A  A++ L      E+CP  LAPT+
Sbjct: 61  LSNSGSTAEIVTLLPLIKRLGITLISMTGNPESPLAKAAEVNLDARVSQEACPLNLAPTS 120

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIG 236
           S  + L +GDALAIALLE+R F+  DF   HPGG LG    +   +VMH+GDS+P VK G
Sbjct: 121 STTVSLVLGDALAIALLEARGFTAEDFAFSHPGGALGRRLLLKVENVMHAGDSLPRVKRG 180

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPK 294
             L DA+  +++K  G   V ++  +L GI T+GD+ R   +  D+    ++DVM  N K
Sbjct: 181 TSLRDALLEMTQKGLGMTVVTEDDGRLAGIFTDGDLRRTLDRNIDVRQTIIDDVMTANGK 240

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L   A++++  H IS L+V+DD    IG ++  DLLR G++
Sbjct: 241 TARAEMLAAEALKIMEDHKISSLVVIDDNDMPIGALNMHDLLRAGVM 287


>gi|330993408|ref|ZP_08317343.1| Putative phosphosugar isomerase [Gluconacetobacter sp. SXCC-1]
 gi|329759438|gb|EGG75947.1| Putative phosphosugar isomerase [Gluconacetobacter sp. SXCC-1]
          Length = 351

 Score =  339 bits (871), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 149/323 (46%), Positives = 204/323 (63%), Gaps = 9/323 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGE-------LSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           A   +  E  GL ++ ++L+         L   F  AVE+I +   RVV+TGIGKSGHIG
Sbjct: 28  ACGVLRTESAGLQAMITALEAPPRPGEAGLGQAFIQAVERILSDNMRVVVTGIGKSGHIG 87

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TLASTGTP+ FVH AEASHGDLGM+ + D ++ +S SG + E+  ++ +ARRF +
Sbjct: 88  RKIQATLASTGTPAIFVHPAEASHGDLGMLQKGDAVLAISNSGETAEMADVISHARRFGM 147

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+TS   S +A  ADIVL LP+ PE+CP+GLAPTTS+ MQLA+GDALAI LL+ R F
Sbjct: 148 LLIAMTSCAHSTLARTADIVLLLPRAPEACPNGLAPTTSSTMQLALGDALAIVLLQRRGF 207

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S +DF V HPGG+LGT      ++MH G S+PL     PL   I  ++ K FGC+ VVD 
Sbjct: 208 SASDFGVFHPGGRLGTQLRRVRELMHPGPSMPLGTPDTPLRQVIMEMTRKAFGCMGVVDA 267

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVL 317
             +L G+IT+ D+      DL+     D+M   P+ I  D L   A++++      IS +
Sbjct: 268 NNRLVGLITDRDLRLALELDLDHTRAADIMNTQPQTIGSDVLAAEALRIMNDRPRPISSI 327

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            V++D  + +GIVH  DLLR GI
Sbjct: 328 FVLNDTDQPVGIVHLHDLLRAGI 350


>gi|145590086|ref|YP_001156683.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145048492|gb|ABP35119.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 330

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 133/325 (40%), Positives = 195/325 (60%), Gaps = 3/325 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  T++ A  ++  E   L ++   L+G  +     AVE +   KGR+V++GIGKSGHI 
Sbjct: 6   RERTLKLARDTLTIEAAALQTMRDRLEGANADALILAVELLHHCKGRIVVSGIGKSGHIA 65

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTG+P+FFVH AEASHGDLGM+TRDD+ + LS SG ++EL  I+   +R   
Sbjct: 66  RKIAATFASTGSPAFFVHPAEASHGDLGMVTRDDVFVALSNSGETEELLTIVPIVKRTGA 125

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T    S +A  AD  L    E E+CP  LAPTTS    LA+GDALA++LL++R F
Sbjct: 126 KLIALTGAPNSSLAKLADAHLDTSVEKEACPLNLAPTTSTTAALAMGDALAVSLLDARGF 185

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG+LG       S+VM S D+ P + I   L DA+  ++ KR G V ++D
Sbjct: 186 QAEDFIRSHPGGRLGRKLLAHVSEVMRSFDNTPKISIQASLQDALLEMTSKRMGMVVILD 245

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E QK+ GI+T+GD+ R   K+ N  SV   +    +P+ I  + L   A++++ +H I+ 
Sbjct: 246 EQQKVFGILTDGDLRRLLEKNTNLGSVTLRNATTPSPRTIPPELLAEEAIEMMEKHRINH 305

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V +     +G ++  DL    +I
Sbjct: 306 LVVTNTEGHLLGALNLHDLFAAKVI 330


>gi|319639068|ref|ZP_07993825.1| KpsF/GutQ family Sugar isomerase [Neisseria mucosa C102]
 gi|317399646|gb|EFV80310.1| KpsF/GutQ family Sugar isomerase [Neisseria mucosa C102]
          Length = 324

 Score =  339 bits (870), Expect = 3e-91,   Method: Composition-based stats.
 Identities = 141/321 (43%), Positives = 204/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E  GL  + ++L  +    F  A E +   KGRVVITG+GKSGHIG K+A
Sbjct: 8   LDWARDVLDTEAEGLREIAAALDHD----FVRAAEALLHCKGRVVITGMGKSGHIGRKMA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FFVH AEA+HGDLGMI   D++I +S SG SDE+ AI+   +R +I LI 
Sbjct: 64  ATMASTGTPAFFVHPAEAAHGDLGMIVDHDVVIAISNSGESDEIAAIIPALKRKNITLIC 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +A HADI +T     E+CP GLAPT+S    +A+GDALA+ LL +R F+ +D
Sbjct: 124 ITAHPTSTMARHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLRARAFTPDD 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G LG  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +
Sbjct: 184 FALSHPAGSLGKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGR 243

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKG+ T+GD+ R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV
Sbjct: 244 LKGVFTDGDLRRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++    IG ++  DLL   I+
Sbjct: 304 EENGVLIGALNMHDLLMARIV 324


>gi|121607157|ref|YP_994964.1| KpsF/GutQ family protein [Verminephrobacter eiseniae EF01-2]
 gi|121551797|gb|ABM55946.1| KpsF/GutQ family protein [Verminephrobacter eiseniae EF01-2]
          Length = 333

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 188/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++ A  +   E   L+ L + + G     F  AV+ +   +GR+V+ G+GKSGH+G 
Sbjct: 14  QQALRMARATFDIEAAALTGLAARVDG----VFAQAVQLVLRTRGRMVVMGMGKSGHVGR 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DDL++ LS SG S EL AIL   RR   P
Sbjct: 70  KIAATLASTGTPAFFVHPAEASHGDLGMVTGDDLVLALSNSGESAELTAILPVLRRLGTP 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T   +S +A HA++VL    + E+CP  LAPT S   QLA+GDALA+ALL++R F 
Sbjct: 130 LIALTGGLQSTLARHAELVLDCSVQREACPLNLAPTASTTAQLAMGDALAVALLDARGFR 189

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG       SDVM  G  I  V         +  +S K  G  A+VD 
Sbjct: 190 TEDFARSHPGGALGRKLLTHVSDVMRRGPEIARVPPEASFSALMREMSAKGLGASAIVDA 249

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R       L + +   VM  NP+ I  D L   A +++  H I+ +
Sbjct: 250 AGQVLGIFTDGDLRRRIEAGAELRSATAAQVMQTNPRCIAPDALAVDAAEMMETHAITSV 309

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V+D   +  G+VH  DL+R  +I
Sbjct: 310 LVIDSAGRLTGVVHIGDLMRAKVI 333


>gi|313895051|ref|ZP_07828608.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 137
           str. F0430]
 gi|312975946|gb|EFR41404.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 137
           str. F0430]
          Length = 328

 Score =  339 bits (870), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 133/332 (40%), Positives = 198/332 (59%), Gaps = 10/332 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            SL  +   + A+ ++  E R ++ L+  +  E    F  AV  I   K RVV+TG+GKS
Sbjct: 1   MSLHTSMIQEKAVETLDLEARAVARLKERIDDE----FEAAVRAILDCKARVVVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    
Sbjct: 57  GHVGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTTDDIVIAISNSGESNEVVNILSIIH 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    +IA+    +S +   AD  + +  E E+CP GLAPT+S    LA+GDA+A+AL+ 
Sbjct: 117 RIGARIIAMCGRRQSQLGRSADFYIDIGVEREACPLGLAPTSSTTATLAMGDAIAMALMA 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R+F + D+ + HPGG LG    +  S+VMH+GD  P+V     + DA+ ++++K  G  
Sbjct: 177 ARDFKKEDYALFHPGGALGRRLLLTVSNVMHTGDENPVVSYHTSVKDALFVMTDKGLGAA 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           +VVD   K  G++T+G I R   KD       V+++M   P  I  D +   A+ ++  H
Sbjct: 237 SVVDADGKFIGLVTDGIIRRALAKDYTFLDEEVQNIMFATPLTIAPDKMAAAALHVMEAH 296

Query: 313 N---ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               ++VL VVD     +GIVH  DLLR G++
Sbjct: 297 KPRPVTVLPVVDAAGVPVGIVHLTDLLRQGVV 328


>gi|254477232|ref|ZP_05090618.1| arabinose 5-phosphate isomerase [Ruegeria sp. R11]
 gi|214031475|gb|EEB72310.1| arabinose 5-phosphate isomerase [Ruegeria sp. R11]
          Length = 323

 Score =  339 bits (869), Expect = 4e-91,   Method: Composition-based stats.
 Identities = 138/323 (42%), Positives = 199/323 (61%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A + I  E +       +L   L  +F  AVE +   KGRV+++GIGKSGHIG 
Sbjct: 5   ETFLATARQVITDEAKA----LDALADALDSRFADAVELVLKAKGRVIVSGIGKSGHIGH 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP++FVH AEASHGDLGM+++DD+++ +S SG + EL  +L + RRF IP
Sbjct: 61  KIAATLASTGTPAYFVHPAEASHGDLGMVSQDDVVLAISNSGEAPELANLLAFTRRFGIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++S   S +   AD+ L +P   E+C  G+ P+ S  + LAIGDALAIAL++ R+F 
Sbjct: 121 LIGLSSRMDSTLMKEADVHLQIPAMGEACGFGMVPSISTTLTLAIGDALAIALMKHRDFR 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG      SD+MH  D++PLV+   P+ DA+  +S+K FG   VV++ 
Sbjct: 181 PENFRAFHPGGKLGARLSRVSDLMHGDDALPLVRQDTPMSDALIEISQKGFGVSGVVNDD 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GIIT+GD+ R+    L   +  DVM  NP  I  D++   A+ ++ +  I+ L VV
Sbjct: 241 GTLIGIITDGDLRRHMD-GLLDKTAADVMTANPTTIASDSMAEEAVAIMNERKITCLFVV 299

Query: 321 D---DCQKAIGIVHFLDLLRFGI 340
           D       A G++H  D LR G+
Sbjct: 300 DPEAKDGVARGLLHIHDCLRVGL 322


>gi|83591354|ref|YP_425106.1| KpsF/GutQ [Rhodospirillum rubrum ATCC 11170]
 gi|83574268|gb|ABC20819.1| KpsF/GutQ [Rhodospirillum rubrum ATCC 11170]
          Length = 366

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 142/319 (44%), Positives = 198/319 (62%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             + CA   + AE   L +L + L G  +       +      G+V+I+G+GKSGH+ +K
Sbjct: 47  RALACARHVLEAEAEALRALAADLNGAFTAAIDLLCDGPAKRSGKVIISGMGKSGHVAAK 106

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFFVH AEASHGDLGMI R D +I LS SG + EL  ++ Y RR  IPL
Sbjct: 107 IAATLASTGTPSFFVHPAEASHGDLGMIGRSDAVIALSNSGETPELADMVAYTRRMGIPL 166

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+IT  + S ++  AD+ L LP   E+CPHGLAPTTS    +A+GDALA+ALLE R F+ 
Sbjct: 167 ISITGRHPSALSDAADVALVLPALTEACPHGLAPTTSTTAMMALGDALAVALLERRGFTA 226

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG+LG   +  +D+MH  D +PLV    P+ +AI  +S K  GCV VVD   
Sbjct: 227 SDFRLFHPGGQLGRKLLKVADLMHGQDRLPLVGPATPMAEAILEISSKSLGCVGVVDAAG 286

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GIIT+GD+ R+   DL + +   VM   PK I   TL    ++++ +  I+ L  +D
Sbjct: 287 RLAGIITDGDLRRHMGADLWSRTAGSVMTPTPKTIAPTTLAIEGLRIMNESAITGLFALD 346

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             ++ +G +H  D LR G+
Sbjct: 347 ADKRPVGFLHLHDCLRAGL 365


>gi|89902984|ref|YP_525455.1| KpsF/GutQ family protein [Rhodoferax ferrireducens T118]
 gi|89347721|gb|ABD71924.1| KpsF/GutQ family protein [Rhodoferax ferrireducens T118]
          Length = 333

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 140/342 (40%), Positives = 193/342 (56%), Gaps = 12/342 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
               H +S T +         ++ A  ++  E   +  L+ +L       F   V  +  
Sbjct: 1   MTLQHTQSSTPQA-----ERALRLARDTLDIEAAAVLGLKQNL----GESFARVVTMVLD 51

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           ++GRVV+ G+GKSGHIG K+A+TLASTGTP+ FVH AEASHGDLGMI   DL++ +S SG
Sbjct: 52  VRGRVVVMGMGKSGHIGRKIAATLASTGTPAMFVHPAEASHGDLGMIKSVDLVLAISNSG 111

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            S+EL AIL   +R   PLIA+T    S +A HAD+ L    E E+CP  LAPT S   Q
Sbjct: 112 ESEELTAILPVLKRLGAPLIAMTGHAGSTLARHADVFLDCGVEKEACPLNLAPTASTTAQ 171

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLID 241
           LA+GDALA+ALL++R F   DF   HPGG LG       SDVM SGD++P V       D
Sbjct: 172 LALGDALAVALLDARGFKAEDFARSHPGGALGRKLLTHVSDVMRSGDAVPHVGPHASFSD 231

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
            +  +S K  G  AVVD+   + GI T+GD+ R   +  DL + +  +VM  NP  I  D
Sbjct: 232 LMREMSVKGLGATAVVDDHMNVLGIFTDGDLRRLVEQGIDLRSTTAAEVMHPNPSTIARD 291

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A +++    I+ ++VVD   +  G ++  DL+R  +I
Sbjct: 292 ALAVEAAEMMELRCITSVLVVDASGQLCGALNSNDLMRAKVI 333


>gi|325203464|gb|ADY98917.1| arabinose 5-phosphate isomerase [Neisseria meningitidis M01-240355]
          Length = 326

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 202/325 (62%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  +L   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 6   NEKYLDWAREVLHTEAEGL----REIAADLDENFALAADALLHCKGRVVITGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R  I
Sbjct: 62  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKDI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 122 TLVCITARPDSTMARHADIHITASVSKEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HP G LG  L +  +D+MH G  +P V++G PL +AI  +SEK  G +AV D
Sbjct: 182 TPDDFALSHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKEAIVSMSEKGLGMLAVTD 241

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +LKG+ T+GD+ R F +  +   LS+++VM   PK I  + L T A+++++ ++++ 
Sbjct: 242 GQCRLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTQPKTISTERLATEALKVMQANHVNG 301

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D      G ++  DLL   I+
Sbjct: 302 LLVTDADGVLTGALNMHDLLAARIV 326


>gi|327485009|gb|AEA79416.1| Arabinose 5-phosphate isomerase [Vibrio cholerae LMA3894-4]
          Length = 324

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQNTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 NNKLVGALNMHDLLKAGVM 324


>gi|50084653|ref|YP_046163.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ADP1]
 gi|49530629|emb|CAG68341.1| D-arabinose 5-phosphate isomerase [Acinetobacter sp. ADP1]
          Length = 325

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 132/320 (41%), Positives = 189/320 (59%), Gaps = 8/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + AL +I  E+  +  L + +       F  A E I   +GRVV+TG+GKSGHIG K+A+
Sbjct: 9   KIALETISVEQHAIDVLVNQIDER----FDQACEIILQCQGRVVVTGMGKSGHIGRKMAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++   +   +PLI I
Sbjct: 65  TFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLMPLIKHLEVPLITI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + ++K  +  +ADI LTL    E+CP GLAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 SRDDKGPMPQNADIALTLGDSNEACPLGLAPTSSTTATLVLGDALAVALLEARGFTADDF 184

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              HP G LG  L +    +MH+   +P V    P+   +  +S KR G   +VDE   L
Sbjct: 185 ARSHPAGALGKRLLLHVKHLMHTQQELPKVSPDTPMNQVLYEISNKRLGLTTIVDENDHL 244

Query: 264 KGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T+GD+ R   K       L V  VM+++P  I ++     A+Q L +  I+  +VV
Sbjct: 245 LGIFTDGDLRRLIDKQQGFDVNLPVRQVMVEHPATISQEARAVEALQKLNEKKINQFVVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K IG++   DL++ G+
Sbjct: 305 DDQNKVIGVISMHDLIQAGV 324


>gi|253997920|ref|YP_003049983.1| KpsF/GutQ family protein [Methylovorus sp. SIP3-4]
 gi|253984599|gb|ACT49456.1| KpsF/GutQ family protein [Methylovorus sp. SIP3-4]
          Length = 332

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 191/325 (58%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A   ++ E R + +L   L       F  AVE I   +GR+V+TG+GKSGHIG
Sbjct: 12  SKTPIDLAREVLLIEAREVEALARRL----DDSFTRAVELILQCQGRIVVTGMGKSGHIG 67

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+T ASTGTP+FFVH AEASHGDLGMIT  D++I LS SG +DEL+ IL   +R   
Sbjct: 68  NKIAATFASTGTPAFFVHPAEASHGDLGMITGKDVVIALSNSGEADELRVILPTLKRMGA 127

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI+IT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALAIA+++ R F
Sbjct: 128 RLISITGHPQSTLAKAADVSLDAHVTEEACPLALAPTASTTASLALGDALAIAVMDQRGF 187

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S  +F + HPGG LG    +   DVM +GD+IP V +   L + +  +S K  G  A+VD
Sbjct: 188 SAEEFALSHPGGTLGRKLLLHVRDVMRTGDAIPSVGVEASLKEGLLEMSRKGLGMTAIVD 247

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             Q   G+ T+GD+ R F    D+N+  + DVM  +P+ I  + L   A+ ++    I+ 
Sbjct: 248 AEQHAVGVFTDGDLRRAFENAVDINSTYMRDVMHTSPQQIRPEQLAVDAVAIMEHKKITS 307

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D     IG ++  DLL   ++
Sbjct: 308 LLVTDQQGTLIGALNMHDLLIAKVV 332


>gi|171464187|ref|YP_001798300.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193725|gb|ACB44686.1| KpsF/GutQ family protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 330

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 133/325 (40%), Positives = 199/325 (61%), Gaps = 3/325 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  T++ A  ++  E   L ++   L+G  +     AVE +   KGR+V++GIGKSGHI 
Sbjct: 6   RERTLKLARDTLTIEAAALQTMRDRLEGVNADALILAVELLHGCKGRIVVSGIGKSGHIA 65

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTG+P+FFVH AEASHGDLGM+TRDD+ + LS SG +DEL  I+   +R   
Sbjct: 66  RKIAATFASTGSPAFFVHPAEASHGDLGMVTRDDVFVALSNSGETDELLTIVPIVKRTGA 125

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T    S +A  AD  L    E E+CP  LAPTTS    LA+GDALA+ALL++R F
Sbjct: 126 KLIALTGAPNSSLAKLADAHLDTSVEKEACPLNLAPTTSTTAALAMGDALAVALLDARGF 185

Query: 200 SENDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG+LG    +  S+VM +    P + I  PL +A+  ++ KR G V ++D
Sbjct: 186 EAEDFIRSHPGGRLGRKQLMHVSEVMRNLAETPKISINAPLQEALLEMTAKRMGMVVILD 245

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + QK+ GI+T+GD+ R+  K  +L+ + +E V   +P+ I  + L   A++++ +H I+ 
Sbjct: 246 DEQKVFGILTDGDLRRSLEKTTNLSGIKLESVTTADPRTIPAELLAEEAIEMMEKHRINH 305

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D+    +G ++  DL    +I
Sbjct: 306 LVVTDNKGLLLGALNLHDLFAAKVI 330


>gi|238927531|ref|ZP_04659291.1| arabinose-5-phosphate isomerase [Selenomonas flueggei ATCC 43531]
 gi|238884813|gb|EEQ48451.1| arabinose-5-phosphate isomerase [Selenomonas flueggei ATCC 43531]
          Length = 326

 Score =  339 bits (869), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 133/330 (40%), Positives = 198/330 (60%), Gaps = 10/330 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +++  Q A+ ++  E   ++ L   +  +    F  A   I A KGRVV+TG+GKSGH
Sbjct: 1   MQESTIRQKAVETLKLEADAVARLTERVDKD----FEAAANAILACKGRVVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTADDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA++   KS +   AD  + +  E E+CP GLAPT S    LA+GDALA+AL+  R
Sbjct: 117 GARIIAMSGRRKSQLGRSADFYIDIGVEREACPLGLAPTASTTATLAMGDALAMALMAVR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG    +  ++VMH+GD  P+V       DA+ ++++K  G V+V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGDENPVVPYHTTAKDALFVMTDKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD       VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDADGKFIGLVTDGIIRRALAKDYTFLDKDVESIMFAAPLTIAPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+D+    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVIDEAGVPVGIVHLTDLLRQGVV 326


>gi|160901482|ref|YP_001567064.1| KpsF/GutQ family protein [Delftia acidovorans SPH-1]
 gi|160367066|gb|ABX38679.1| KpsF/GutQ family protein [Delftia acidovorans SPH-1]
          Length = 333

 Score =  338 bits (868), Expect = 5e-91,   Method: Composition-based stats.
 Identities = 143/328 (43%), Positives = 196/328 (59%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +L     ++ A  ++  E   L ++   L G     F   V++I  + GRVV+ G+GKSG
Sbjct: 10  ALDTPRALRLARDTLGIEADALQAMSQRLDG----VFGEVVQRILRLSGRVVVMGMGKSG 65

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL++ LS SG +DEL A+L   +R
Sbjct: 66  HVGRKVAATLASTGTPAFFVHPAEASHGDLGMVTGIDLVLALSNSGEADELAALLPAIKR 125

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             I L+A+T   +S +A HAD VL    E E+CP  LAPT S   Q+A+GDALA+ALL++
Sbjct: 126 QGIALVAMTGGAQSTLARHADWVLNTRVEREACPLNLAPTASTTAQMAMGDALAVALLDA 185

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F   DF   HPGG LG        DVM SGD +P V      ++ +  +S K  GC A
Sbjct: 186 RGFGAEDFARSHPGGALGRKLLTHVRDVMRSGDELPKVGADASFVELMREMSAKGLGCSA 245

Query: 256 VVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +VD    L+GI T+GD+ R      DL  L   DVM K P+ I ED L   A  ++ +H 
Sbjct: 246 IVDAAGVLQGIFTDGDLRRRVEAGTDLRALQAGDVMHKGPRTIAEDALAVDAASMMEEHG 305

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ ++V D  ++  G+VH  DL+R  +I
Sbjct: 306 ITAVLVADAQRQLRGVVHIRDLMRAKVI 333


>gi|303256244|ref|ZP_07342260.1| sugar isomerase, KpsF/GutQ [Burkholderiales bacterium 1_1_47]
 gi|331001305|ref|ZP_08324931.1| arabinose 5-phosphate isomerase [Parasutterella excrementihominis
           YIT 11859]
 gi|302860973|gb|EFL84048.1| sugar isomerase, KpsF/GutQ [Burkholderiales bacterium 1_1_47]
 gi|329569032|gb|EGG50828.1| arabinose 5-phosphate isomerase [Parasutterella excrementihominis
           YIT 11859]
          Length = 327

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 197/325 (60%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +      ++ E + L +    + G L   F  AV  I   KGRVV++G+GKSGHI 
Sbjct: 7   EKGILNLGRHVLLEEAKELEA----IAGRLDETFVKAVTLILNCKGRVVVSGVGKSGHIA 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTG+P+FFVHAAEA+HGDLGMIT+DD++I +S+SG++ EL  I+    R   
Sbjct: 63  RKIAATLASTGSPAFFVHAAEAAHGDLGMITKDDVVIAISYSGTTSELLTIIPTVIREGA 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I+IT  + + +A  A + L +    E+CP  LAPT+S    LA+GDALA+A L+++ F
Sbjct: 123 PVISITGSDDNTLAKEATVNLNVHVSREACPLNLAPTSSTTATLAMGDALAVACLDAKGF 182

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG        DVM SG++ P+V+I   ++DA+  +++K+ G  A+VD
Sbjct: 183 GPEDFARSHPGGALGRRLLTHVRDVMRSGEATPVVRIDATVLDAVKEITKKKIGMTAIVD 242

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  K+KGI TEGD+ R   +  D+  L + DVM  NP  I    L   A ++L     + 
Sbjct: 243 ETDKVKGIFTEGDLRRLIERVGDIRPLKIRDVMTPNPTTIQPQALAAEAAKILNSTLRNQ 302

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVDD  + IG +H  DL+   +I
Sbjct: 303 LLVVDDSDRLIGALHIHDLMTAKVI 327


>gi|161523709|ref|YP_001578721.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
 gi|189351527|ref|YP_001947155.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
           17616]
 gi|221211209|ref|ZP_03584188.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
 gi|160341138|gb|ABX14224.1| KpsF/GutQ family protein [Burkholderia multivorans ATCC 17616]
 gi|189335549|dbj|BAG44619.1| arabinose-5-phosphate isomerase [Burkholderia multivorans ATCC
           17616]
 gi|221168570|gb|EEE01038.1| sugar isomerase, KpsF/GutQ family [Burkholderia multivorans CGD1]
          Length = 327

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 139/324 (42%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDG----SFAHAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM +GD +P V +   L DA+  ++ KR G  AVVD 
Sbjct: 184 SEDFARSHPGGALGRRLLTYVRDVMRTGDDVPYVGLDATLSDALFQITAKRMGMTAVVDT 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +K+ GI T+GD+ R   +  D   L + DVM + P+ I  D L   A++L+ +H I+ +
Sbjct: 244 NRKVAGIFTDGDLRRVLARDGDFRRLPIADVMTREPRTIGADHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGVLIGALNMHDLFSKKVI 327


>gi|113461061|ref|YP_719129.1| polysialic acid capsule expression protein, KpsF/GutQ family
           protein [Haemophilus somnus 129PT]
 gi|112823104|gb|ABI25193.1| polysialic acid capsule expression protein, KpsF/GutQ family
           protein [Haemophilus somnus 129PT]
          Length = 321

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 131/325 (40%), Positives = 191/325 (58%), Gaps = 9/325 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T   +  M  + +Q A  S+ AE+  L+ L  +L      QF+  VE I   +GR+V+ 
Sbjct: 1   MTALFNEEMTMNYLQIARNSLAAEQNALAKLSQNLNQ----QFNQVVELILNCEGRLVVG 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  +
Sbjct: 57  GIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKL 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +   + F   +IA+T    S +A HAD +L +  E E+CP+ LAPTTSA++ LA+GDALA
Sbjct: 117 IPSLKNFGNKIIALTGNLNSTLAKHADYILDISVEREACPNNLAPTTSALVTLALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ++L+ +RNF   DF   HPGG LG   +C             V       D +T+++E R
Sbjct: 177 VSLITARNFQPADFAKFHPGGSLGRRLLCRVKDQMQVRLPK-VTENTNFTDCLTVMNEGR 235

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQ 307
            G   V+ E + LKGIIT+GDI R    +       + +D+M  NPK I  +T L+ A  
Sbjct: 236 MGVALVM-ENENLKGIITDGDIRRALSANGTNTLNKTAKDLMTSNPKTINYNTYLSEAEN 294

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHF 332
            +++  I  L+VVDD  K IG+V F
Sbjct: 295 FMKEKKIHSLVVVDDQNKVIGLVEF 319


>gi|221069832|ref|ZP_03545937.1| KpsF/GutQ family protein [Comamonas testosteroni KF-1]
 gi|220714855|gb|EED70223.1| KpsF/GutQ family protein [Comamonas testosteroni KF-1]
          Length = 333

 Score =  338 bits (868), Expect = 6e-91,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 191/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A  ++  E   L S+   L G     F   V++I  + GRVV+ G+GKSGH+G K
Sbjct: 15  RALNLARAALDIEAAALRSMSERLNG----AFTAVVQRILQLPGRVVVMGMGKSGHVGRK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH AEASHGDLGM+T+DDL++ LS SG +DEL  +L   +R  +PL
Sbjct: 71  VAATLASTGTPAFFVHPAEASHGDLGMLTQDDLVLALSNSGETDELTGVLPAIKRMGVPL 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T    S +A HAD VL    + E+CP  LAPT S   QLA+GDALA+ALL++R F  
Sbjct: 131 VAVTGGLSSTLAKHADWVLDTRVDKEACPLNLAPTASTTAQLAMGDALAVALLDARGFGA 190

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVM  G  +P V      ++ +  +S K  GC AVV+ G
Sbjct: 191 EDFARSHPGGALGRRLLTHVRDVMRRGADVPQVVQDVSSVELMREMSAKGLGCSAVVNAG 250

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI T+GD+ R      DL +    DVM   P  I  D L   A +++ +H I+ ++
Sbjct: 251 GELVGIFTDGDLRRCVEAGVDLRSRVASDVMHPRPLTIKPDLLAVAAARMMEEHGITAVL 310

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V DD Q   G+VH  DL+R  +I
Sbjct: 311 VTDDSQHLQGVVHIRDLMRAKVI 333


>gi|229527543|ref|ZP_04416935.1| arabinose 5-phosphate isomerase [Vibrio cholerae 12129(1)]
 gi|254291440|ref|ZP_04962232.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|297581369|ref|ZP_06943292.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|150422630|gb|EDN14585.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|229335175|gb|EEO00660.1| arabinose 5-phosphate isomerase [Vibrio cholerae 12129(1)]
 gi|297534207|gb|EFH73045.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 326

 Score =  338 bits (867), Expect = 7e-91,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQNTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|262401813|ref|ZP_06078378.1| arabinose 5-phosphate isomerase [Vibrio sp. RC586]
 gi|262351785|gb|EEZ00916.1| arabinose 5-phosphate isomerase [Vibrio sp. RC586]
          Length = 324

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 195/319 (61%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLRTEIAALQQLEQYINAD----FASACSTILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R +I +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLNIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGEALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++ DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHTTAIADVMTRQPAVAQPNLLAVEGLNLMQAKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 NNKLVGALNMHDLLKAGVM 324


>gi|170700371|ref|ZP_02891381.1| KpsF/GutQ family protein [Burkholderia ambifaria IOP40-10]
 gi|171318648|ref|ZP_02907794.1| KpsF/GutQ family protein [Burkholderia ambifaria MEX-5]
 gi|172061745|ref|YP_001809397.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
 gi|170134715|gb|EDT03033.1| KpsF/GutQ family protein [Burkholderia ambifaria IOP40-10]
 gi|171096156|gb|EDT41079.1| KpsF/GutQ family protein [Burkholderia ambifaria MEX-5]
 gi|171994262|gb|ACB65181.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
          Length = 327

 Score =  338 bits (867), Expect = 8e-91,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 190/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDGD----FVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG        DVM SGD +P V +   L DA+  ++ KR G  AVV  
Sbjct: 184 SEDFARSHPGGALGRRLLTHVRDVMRSGDDVPRVGLDATLSDALFQITAKRLGMTAVVGA 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D  TL + DVM + P+ I  + L   A++L+ +H I+ +
Sbjct: 244 DGRVAGIFTDGDLRRVLAREGDFRTLPIVDVMTREPRTIGPEHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDADGALIGALNMHDLFSKKVI 327


>gi|261379307|ref|ZP_05983880.1| arabinose 5-phosphate isomerase [Neisseria subflava NJ9703]
 gi|284797747|gb|EFC53094.1| arabinose 5-phosphate isomerase [Neisseria subflava NJ9703]
          Length = 324

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 140/321 (43%), Positives = 205/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E  GL  + ++L  +    F  A E +   KGRVVITG+GKSGHIG K+A
Sbjct: 8   LDWARDVLDTEAEGLREIAAALDHD----FIRAAEALLHCKGRVVITGMGKSGHIGRKMA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FFVH AEA+HGDLGMI   D+++ +S SG SDE+ AI+   +R +I LI 
Sbjct: 64  ATMASTGTPAFFVHPAEAAHGDLGMIVDHDVVVAISNSGESDEIAAIIPALKRKNITLIC 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +A HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +D
Sbjct: 124 ITAHPTSTMARHADIHITAAVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDD 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G LG  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +
Sbjct: 184 FALSHPAGSLGKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGR 243

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKG+ T+GD+ R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV
Sbjct: 244 LKGVFTDGDLRRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++    IG ++  DLL   I+
Sbjct: 304 EENGVLIGALNMHDLLMARIV 324


>gi|268595486|ref|ZP_06129653.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae 35/02]
 gi|291043079|ref|ZP_06568802.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae DGI2]
 gi|293398417|ref|ZP_06642595.1| arabinose-5-phosphate isomerase [Neisseria gonorrhoeae F62]
 gi|268548875|gb|EEZ44293.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae 35/02]
 gi|291012685|gb|EFE04668.1| polysialic acid capsule expression protein kpsF [Neisseria
           gonorrhoeae DGI2]
 gi|291610888|gb|EFF39985.1| arabinose-5-phosphate isomerase [Neisseria gonorrhoeae F62]
          Length = 332

 Score =  338 bits (867), Expect = 9e-91,   Method: Composition-based stats.
 Identities = 140/333 (42%), Positives = 207/333 (62%), Gaps = 8/333 (2%)

Query: 13  RKGHSLMKN-STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++  ++ +N   +  A   +  E  GL      +  EL   F  A + +   KGRVVITG
Sbjct: 4   QRRMAMAENEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITG 59

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+
Sbjct: 60  MGKSGHIGRKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAII 119

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R  I L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+
Sbjct: 120 PALKRKDITLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAV 179

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            LL +R F+ +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK 
Sbjct: 180 VLLRARAFTPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKG 239

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G +AV D    LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++
Sbjct: 240 LGMLAVTDGQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKV 299

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ ++++ L+V D      G ++  DLL   I+
Sbjct: 300 MQANHVNGLLVTDADGVLTGALNMHDLLAARIV 332


>gi|229513448|ref|ZP_04402912.1| arabinose 5-phosphate isomerase [Vibrio cholerae TMA 21]
 gi|229349325|gb|EEO14281.1| arabinose 5-phosphate isomerase [Vibrio cholerae TMA 21]
          Length = 326

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIYALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|255744500|ref|ZP_05418452.1| arabinose 5-phosphate isomerase [Vibrio cholera CIRS 101]
 gi|262154676|ref|ZP_06028802.1| arabinose 5-phosphate isomerase [Vibrio cholerae INDRE 91/1]
 gi|262191038|ref|ZP_06049247.1| arabinose 5-phosphate isomerase [Vibrio cholerae CT 5369-93]
 gi|255738025|gb|EET93418.1| arabinose 5-phosphate isomerase [Vibrio cholera CIRS 101]
 gi|262030516|gb|EEY49154.1| arabinose 5-phosphate isomerase [Vibrio cholerae INDRE 91/1]
 gi|262033101|gb|EEY51630.1| arabinose 5-phosphate isomerase [Vibrio cholerae CT 5369-93]
          Length = 324

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 NNKLVGALNMHDLLKAGVM 324


>gi|253997534|ref|YP_003049598.1| KpsF/GutQ family protein [Methylotenera mobilis JLW8]
 gi|253984213|gb|ACT49071.1| KpsF/GutQ family protein [Methylotenera mobilis JLW8]
          Length = 341

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 142/341 (41%), Positives = 198/341 (58%), Gaps = 9/341 (2%)

Query: 6   SHFKSVTRKGHSLMKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           S  K       S +      +  A   +  E   + +L   L       F  AV  I   
Sbjct: 5   SQIKKSNAASASPLGEQAQTLALAKEVLQLESSEIDALAQRLDHR----FSEAVSLILQC 60

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           KGRVV+TG+GKSGHIG K+ASTLASTGTP+FF+H AEASHGDLGMIT  D++I LS SG 
Sbjct: 61  KGRVVVTGMGKSGHIGGKIASTLASTGTPAFFMHPAEASHGDLGMITAGDVVIALSNSGE 120

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           SDE+ AI+    R    +IAIT  + S +A  A+I L+     E+CP GLAPT+S  + L
Sbjct: 121 SDEVLAIVPPLTRLGASIIAITGNDASSLAKAANIHLSAHVSREACPLGLAPTSSTTVAL 180

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDA 242
           A+GDALA+ +L+ R+F+  DF   HPGG LG    V  SDVM +   +P V     L +A
Sbjct: 181 ALGDALALCVLDLRDFTAEDFARSHPGGSLGRRLLVHVSDVMRTDAGVPHVSEQAGLAEA 240

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDT 300
           +  +S K  G  AVV+   +  GI T+GD+ R F +++N ++ +  DVM  NP  I +D 
Sbjct: 241 LLEMSRKGLGLTAVVNAKHEPVGIFTDGDLRRAFEQNVNVMTAKILDVMHVNPSTIHQDQ 300

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L   A++++ Q  I+ L+VVDD  + +G ++  DLL   ++
Sbjct: 301 LAIAAVEIMEQRKINGLLVVDDAGRLVGALNMHDLLLAKVV 341


>gi|262167552|ref|ZP_06035257.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC27]
 gi|262024005|gb|EEY42701.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC27]
          Length = 324

 Score =  338 bits (866), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 11  AKQVLATEIHALQQLEQYINED----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 67  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 127 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 186

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 187 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 246

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 247 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 NNKLVGALNMHDLLKAGVM 324


>gi|239999673|ref|ZP_04719597.1| KpsF [Neisseria gonorrhoeae 35/02]
 gi|240014850|ref|ZP_04721763.1| KpsF [Neisseria gonorrhoeae DGI18]
 gi|240017296|ref|ZP_04723836.1| KpsF [Neisseria gonorrhoeae FA6140]
 gi|240113274|ref|ZP_04727764.1| KpsF [Neisseria gonorrhoeae MS11]
 gi|240116372|ref|ZP_04730434.1| KpsF [Neisseria gonorrhoeae PID18]
 gi|240118660|ref|ZP_04732722.1| KpsF [Neisseria gonorrhoeae PID1]
 gi|240121369|ref|ZP_04734331.1| KpsF [Neisseria gonorrhoeae PID24-1]
 gi|240124204|ref|ZP_04737160.1| KpsF [Neisseria gonorrhoeae PID332]
 gi|240126406|ref|ZP_04739292.1| KpsF [Neisseria gonorrhoeae SK-92-679]
 gi|240128871|ref|ZP_04741532.1| KpsF [Neisseria gonorrhoeae SK-93-1035]
 gi|254494389|ref|ZP_05107560.1| sugar isomerase [Neisseria gonorrhoeae 1291]
 gi|260439809|ref|ZP_05793625.1| KpsF [Neisseria gonorrhoeae DGI2]
 gi|268599354|ref|ZP_06133521.1| sugar isomerase [Neisseria gonorrhoeae MS11]
 gi|268602039|ref|ZP_06136206.1| sugar isomerase [Neisseria gonorrhoeae PID18]
 gi|268604373|ref|ZP_06138540.1| sugar isomerase [Neisseria gonorrhoeae PID1]
 gi|268682830|ref|ZP_06149692.1| sugar isomerase [Neisseria gonorrhoeae PID332]
 gi|268684991|ref|ZP_06151853.1| sugar isomerase [Neisseria gonorrhoeae SK-92-679]
 gi|268687253|ref|ZP_06154115.1| sugar isomerase [Neisseria gonorrhoeae SK-93-1035]
 gi|226513429|gb|EEH62774.1| sugar isomerase [Neisseria gonorrhoeae 1291]
 gi|268583485|gb|EEZ48161.1| sugar isomerase [Neisseria gonorrhoeae MS11]
 gi|268586170|gb|EEZ50846.1| sugar isomerase [Neisseria gonorrhoeae PID18]
 gi|268588504|gb|EEZ53180.1| sugar isomerase [Neisseria gonorrhoeae PID1]
 gi|268623114|gb|EEZ55514.1| sugar isomerase [Neisseria gonorrhoeae PID332]
 gi|268625275|gb|EEZ57675.1| sugar isomerase [Neisseria gonorrhoeae SK-92-679]
 gi|268627537|gb|EEZ59937.1| sugar isomerase [Neisseria gonorrhoeae SK-93-1035]
          Length = 324

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 4   NEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I
Sbjct: 60  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 120 TLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 179

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D
Sbjct: 180 TPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 240 GQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNG 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D      G ++  DLL   I+
Sbjct: 300 LLVTDADGVLTGALNMHDLLAARIV 324


>gi|126734480|ref|ZP_01750227.1| arabinose 5-phosphate isomerase [Roseobacter sp. CCS2]
 gi|126717346|gb|EBA14210.1| arabinose 5-phosphate isomerase [Roseobacter sp. CCS2]
          Length = 322

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 135/320 (42%), Positives = 194/320 (60%), Gaps = 7/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R I  E + L+ L      +L   F  A+E +    GRV++TG+GKSGHI  K+A
Sbjct: 8   LTAARRVITQEAKALTVLSD----QLGDSFGEAIELLLNASGRVIVTGMGKSGHIARKIA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF I +I 
Sbjct: 64  ATFASTGTPAHFVHPAEASHGDLGMMTRGDVVLVLSNSGETPELADLVAYTRRFGIAMIG 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + S+ +S +   AD+ + LP+  E+C  G+ PTTS  M LA+GDALA+AL+E R+F+  +
Sbjct: 124 VASKPQSTLLQRADVAIVLPQLGEACGTGVVPTTSTTMTLALGDALAVALMEHRDFTPEN 183

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGGKLG      SD+MH  +++PLV    P+ +A+ ++S+K FG V V D   +L
Sbjct: 184 FREFHPGGKLGAQLSKVSDLMHVANAVPLVPADTPMSEALLVISQKGFGVVGVTDTDDRL 243

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T+GD+ R+    L   +  +VM   P  +  + L   A+ L+    I+ L  VD  
Sbjct: 244 IGIVTDGDLRRHM-TGLLDHTAREVMTAQPTTVAPNALAEEAVALMNDKKITCLFAVDPA 302

Query: 324 --QKAIGIVHFLDLLRFGII 341
               A G +H  D LR GI+
Sbjct: 303 GPGTAAGFIHIHDCLRAGIV 322


>gi|153829802|ref|ZP_01982469.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148874720|gb|EDL72855.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 326

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  L+  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLDQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQNTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|118579405|ref|YP_900655.1| KpsF/GutQ family protein [Pelobacter propionicus DSM 2379]
 gi|118502115|gb|ABK98597.1| KpsF/GutQ family protein [Pelobacter propionicus DSM 2379]
          Length = 321

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 134/323 (41%), Positives = 186/323 (57%), Gaps = 9/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            V+ A R I  E   L ++   + G     F  AV  I    GRVV++G+GKSG +G K+
Sbjct: 2   IVEEARRVIRVEAEALLAMAERING----AFEQAVRMILDCTGRVVVSGMGKSGLVGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ASTGTP+ F+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    LI
Sbjct: 58  ASTMASTGTPALFLHPAEGIHGDLGMIMKGDVVIAISNSGETEEMLRILPIIKRLGARLI 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            ++    S +A  +D+ L +  + E+CP GLAPT S    LA+GDALA+ALL  R F   
Sbjct: 118 GMSGNAASTLARGSDLFLDVSVKEEACPLGLAPTASTTATLAMGDALAVALLIQRGFRAE 177

Query: 203 DFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF + HPGG LG        D+MHSGD IP+V     + D + ++S KR G   V  +  
Sbjct: 178 DFALFHPGGALGKKLFLRVEDLMHSGDEIPMVSAQAVMRDVLFVISAKRLGVTGVAGDNG 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L+G+IT+GD+ R   K  D+     E +M  NPK I    L   A++L+ Q++I+ L V
Sbjct: 238 ELRGVITDGDLRRALEKGYDILEREAEAIMRLNPKRISRHELAAAALRLMEQYSITSLFV 297

Query: 320 VDDC--QKAIGIVHFLDLLRFGI 340
            DD       GIVH  D+LR GI
Sbjct: 298 FDDDTSSVPCGIVHLHDILRSGI 320


>gi|297537430|ref|YP_003673199.1| KpsF/GutQ family protein [Methylotenera sp. 301]
 gi|297256777|gb|ADI28622.1| KpsF/GutQ family protein [Methylotenera sp. 301]
          Length = 334

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 139/333 (41%), Positives = 203/333 (60%), Gaps = 7/333 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
                ++ K +T++ A   ++ E   +++L + L G    QF  AV  I   KGRVV++G
Sbjct: 6   NASESAIAKQTTLELARDVLLLEASEINALATRLDG----QFTDAVALILQCKGRVVVSG 61

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+ASTLASTGTP+FF+H AEASHGDLGMIT  D++I LS SG SDE+ AI+
Sbjct: 62  MGKSGHIGGKIASTLASTGTPAFFMHPAEASHGDLGMITAGDIVIALSNSGESDEILAIV 121

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +R    +IAIT  + S +A  ADI L+     E+CP GLAPT+S  + LA+GDALA+
Sbjct: 122 PPLKRLGASIIAITGNDASTLAKAADIHLSAHVAKEACPLGLAPTSSTTVALALGDALAL 181

Query: 192 ALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            +L+ R+F+  DF   HPGG LG    +  +D+M +G  +P V I   L + +  ++ K 
Sbjct: 182 CVLDQRDFTAEDFARSHPGGSLGRRLLIHVNDLMRTGAQVPQVTINATLSEGLLEMTRKG 241

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G  A+VD      GI T+GD+ R F +  D+ T  ++DVM +NP  I +  L   A+++
Sbjct: 242 LGLTAIVDSNNMPIGIFTDGDLRRAFEQKVDVATSGIKDVMHQNPSTIHQGKLAIEAVEM 301

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + Q  I+ L+V DD    +G ++  DLL   ++
Sbjct: 302 MEQRKINALLVTDDAGVLVGALNMHDLLLAKVV 334


>gi|187479584|ref|YP_787609.1| arabinose 5-phosphate isomerase [Bordetella avium 197N]
 gi|115424171|emb|CAJ50724.1| arabinose 5-phosphate isomerase [Bordetella avium 197N]
          Length = 328

 Score =  337 bits (865), Expect = 1e-90,   Method: Composition-based stats.
 Identities = 128/323 (39%), Positives = 192/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R++  E + ++ L + L G     F  AV+ + A +GRVV++G+GK+GHI  K
Sbjct: 10  DALASARRTLQTEAQAITELSARLDG----SFTRAVDMLLACQGRVVVSGLGKTGHIARK 65

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FF+HAAEA+HGDLGM+T  D+++ LS+SGS  EL  IL  A+R  + +
Sbjct: 66  IAATLASTGTPAFFMHAAEAAHGDLGMLTSQDVLMALSYSGSGQELLTILPVAKRLGVGI 125

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  AD+ L      E+CP  LAPT S  + LA+GDALA+A LE+R F  
Sbjct: 126 IALTGNPASDLALQADVHLDASVVQEACPLNLAPTASTTVSLALGDALAVACLEARGFGP 185

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HPGG LG        D+M  G+++P V     L  A+  +S K  G  AVVD  
Sbjct: 186 DDFARSHPGGALGRRLLTHVRDIMRHGEALPTVASTDSLSRALEEMSAKGMGMTAVVDAQ 245

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +  GI T+GD+ R   +  D+  L+V + M  NP+ +    L   A +++ +  +S ++
Sbjct: 246 LRPVGIFTDGDLRRLIERLGDVRGLTVAEGMTHNPRSVEPGALAVEAARIMDEKRLSQML 305

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V++D    IG +H  DL+   ++
Sbjct: 306 VINDDGVLIGALHMHDLMAAKVV 328


>gi|15642519|ref|NP_232152.1| hypothetical protein VC2523 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121591414|ref|ZP_01678694.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153801137|ref|ZP_01955723.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153817991|ref|ZP_01970658.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822432|ref|ZP_01975099.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153825768|ref|ZP_01978435.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227082642|ref|YP_002811193.1| Arabinose 5-phosphate isomerase [Vibrio cholerae M66-2]
 gi|229507420|ref|ZP_04396925.1| arabinose 5-phosphate isomerase [Vibrio cholerae BX 330286]
 gi|229509655|ref|ZP_04399136.1| arabinose 5-phosphate isomerase [Vibrio cholerae B33]
 gi|229516780|ref|ZP_04406226.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC9]
 gi|229521589|ref|ZP_04411007.1| arabinose 5-phosphate isomerase [Vibrio cholerae TM 11079-80]
 gi|229606927|ref|YP_002877575.1| arabinose 5-phosphate isomerase [Vibrio cholerae MJ-1236]
 gi|254851067|ref|ZP_05240417.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|298500648|ref|ZP_07010452.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9657107|gb|AAF95665.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121546730|gb|EAX56905.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124123370|gb|EAY42113.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126511426|gb|EAZ74020.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520075|gb|EAZ77298.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|149740491|gb|EDM54606.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227010530|gb|ACP06742.1| Arabinose 5-phosphate isomerase [Vibrio cholerae M66-2]
 gi|229341183|gb|EEO06187.1| arabinose 5-phosphate isomerase [Vibrio cholerae TM 11079-80]
 gi|229345843|gb|EEO10815.1| arabinose 5-phosphate isomerase [Vibrio cholerae RC9]
 gi|229353129|gb|EEO18068.1| arabinose 5-phosphate isomerase [Vibrio cholerae B33]
 gi|229354925|gb|EEO19846.1| arabinose 5-phosphate isomerase [Vibrio cholerae BX 330286]
 gi|229369582|gb|ACQ60005.1| arabinose 5-phosphate isomerase [Vibrio cholerae MJ-1236]
 gi|254846772|gb|EET25186.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|297540817|gb|EFH76874.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 326

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|121727422|ref|ZP_01680550.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674957|ref|YP_001218020.1| hypothetical protein VC0395_A2104 [Vibrio cholerae O395]
 gi|121630194|gb|EAX62594.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316840|gb|ABQ21379.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227014413|gb|ACP10623.1| Arabinose 5-phosphate isomerase [Vibrio cholerae O395]
          Length = 326

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLEQYINED----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|115352897|ref|YP_774736.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
 gi|115282885|gb|ABI88402.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
          Length = 327

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 190/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDGD----FVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 124 LIAITGRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 183

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG        DVM SGD +P V +   L DA+  ++ KR G  AVV  
Sbjct: 184 SEDFARSHPGGALGRRLLTHVRDVMRSGDDVPRVGLDATLSDALFQITAKRLGMTAVVGP 243

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R   +  D  TL + DVM + P+ I  + L   A++L+ +H I+ +
Sbjct: 244 DGRVAGIFTDGDLRRVLAREGDFRTLPIVDVMTREPRTIGPEHLAVEAVELMERHRINQM 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 304 LVVDAHGALIGALNMHDLFSKKVI 327


>gi|153869740|ref|ZP_01999274.1| polysialic acid capsule expression protein [Beggiatoa sp. PS]
 gi|152073796|gb|EDN70728.1| polysialic acid capsule expression protein [Beggiatoa sp. PS]
          Length = 326

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 129/315 (40%), Positives = 193/315 (61%), Gaps = 7/315 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E   ++ L + +       F  A E +   +GR+V+ G+GKSGHIG K+A+TLAST
Sbjct: 16  VIQTETEAIAELANRI----DEAFVHACELMLKCEGRIVVIGMGKSGHIGGKIAATLAST 71

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G+P+FFVH  EA HGDLGMIT  D+++VLS SG ++E+  IL   +R ++PL+ +T    
Sbjct: 72  GSPAFFVHPGEACHGDLGMITAKDVVLVLSNSGETEEIITILLLIKRLNVPLLTLTGNKT 131

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  A + + +  E E+CP GLAPT+S    L +GDALAIALLE++ FS +DF   HP
Sbjct: 132 STLALAATVNIDVSVEKEACPLGLAPTSSTTAALVMGDALAIALLEAKGFSADDFARSHP 191

Query: 210 G-GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                  L +  SD+MH+G+ IP V     L DA+  ++ K  G   + D+  K+ GI T
Sbjct: 192 KGRLGRRLLLLVSDIMHTGEEIPSVPPTATLRDALVEMTRKGLGMTTIADKELKIHGIFT 251

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +GD+ R   K  DL++  + DVM  + K ++ D L   A+ L++ H I+VL++VD+    
Sbjct: 252 DGDLRRVLDKKCDLHSTIISDVMTAHCKTVVADCLAVEALSLMQSHKITVLLIVDNTHTL 311

Query: 327 IGIVHFLDLLRFGII 341
           +GI+H  D+LR G++
Sbjct: 312 VGILHIHDILRAGVV 326


>gi|221126303|ref|XP_002165354.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
 gi|260221784|emb|CBA30693.1| Arabinose 5-phosphate isomerase [Curvibacter putative symbiont of
           Hydra magnipapillata]
          Length = 333

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 139/330 (42%), Positives = 187/330 (56%), Gaps = 7/330 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             S      +  A  +   E   +  L+S L       F   VE++  I GRVV+ G+GK
Sbjct: 8   ASSFDAQRAIALANETFDIEAAAVQGLKSRL----GEGFVRTVERVLTISGRVVVMGMGK 63

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGH+G K+A+TLASTGTP+ FVH AEASHGDLGM+T  DL++++S SG S E+ AIL   
Sbjct: 64  SGHVGRKIAATLASTGTPAMFVHPAEASHGDLGMVTDADLVLMISNSGESQEVAAILPVL 123

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +R  +PL+A+T   +S +A HAD  +      E+CP  LAPT S   QLA+GDALA+ALL
Sbjct: 124 KRLGVPLVAMTGNARSTMAQHADFWIDTAVSKEACPLNLAPTASTTAQLAMGDALAVALL 183

Query: 195 ESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++R F   DF   HPGG LG       SDVM SGD+IP V       + +  +S K  G 
Sbjct: 184 DARGFRAEDFARSHPGGALGRKLLTHVSDVMRSGDAIPRVWPTATFSELMREMSAKGLGA 243

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            AVV E + L GI T+GD+ R   +  DL   +  DVM  NP  I    L   A  L+  
Sbjct: 244 TAVVTEDETLMGIFTDGDLRRLVEQGTDLRAKTAMDVMHANPCTIPAHALAVDAADLMEA 303

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             I+ ++VVDD  +  G ++  DL+R  +I
Sbjct: 304 RRITSVLVVDDAGRLCGAINSNDLMRAKVI 333


>gi|332531202|ref|ZP_08407115.1| KpsF/GutQ family protein [Hylemonella gracilis ATCC 19624]
 gi|332039309|gb|EGI75722.1| KpsF/GutQ family protein [Hylemonella gracilis ATCC 19624]
          Length = 328

 Score =  337 bits (864), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 134/330 (40%), Positives = 195/330 (59%), Gaps = 7/330 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             +   + T+  A  ++  E + +++L + L       F  AV+ +    GRVV+ G+GK
Sbjct: 3   SKTFDSSRTLTIAREALDIEAQAVAALATRLDAR----FTAAVQCVLVSSGRVVVMGMGK 58

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGH+G K+A+TLASTGTP+ FVH AEASHGDLGMIT  D+++ +S SG S+EL  +L   
Sbjct: 59  SGHVGRKIAATLASTGTPAMFVHPAEASHGDLGMITLKDVVLGISNSGESEELTVLLPLI 118

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +R  +PLIA+T    S +A HAD +L    E E+CPH LAPT S   QLA+GDALA+ALL
Sbjct: 119 KRMGVPLIAMTGRATSSLARHADHLLDTSVEKEACPHNLAPTASTTAQLAMGDALAMALL 178

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++R F   DF   HPGG LG   +   SD+M S D +P V +   L+  +  +S K  G 
Sbjct: 179 DARGFKAEDFARSHPGGALGRKLLTMVSDIMRSEDVVPKVPLDADLMTLMREISVKGLGA 238

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            A+VD+  +  G+ T+GD+ R   K   +    + DVM  NP+ I  + L   A +L+ Q
Sbjct: 239 GAIVDQDNRPVGVFTDGDLRRLIEKGGEIRHAKIRDVMHANPRTISREALAVEAAKLMEQ 298

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             I+ + VVD+  +  G ++  DL+R  +I
Sbjct: 299 QKITSVFVVDEAGRLCGALNANDLMRAKVI 328


>gi|194099435|ref|YP_002002537.1| KpsF [Neisseria gonorrhoeae NCCP11945]
 gi|193934725|gb|ACF30549.1| KpsF [Neisseria gonorrhoeae NCCP11945]
 gi|317164936|gb|ADV08477.1| KpsF [Neisseria gonorrhoeae TCDC-NG08107]
          Length = 326

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 139/325 (42%), Positives = 201/325 (61%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A   +  E  GL      +  EL   F  A + +   KGRVVITG+GKSGHIG
Sbjct: 6   NEKYLDWAREVLHTEAEGL----REIAAELDENFVLAADALLHCKGRVVITGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D++  +S SG SDE+ AI+   +R  I
Sbjct: 62  RKMAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVAAISNSGESDEITAIIPALKRKDI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL +R F
Sbjct: 122 TLVCITARPDSTMARHADIHITASVSQEACPLGLAPTTSTTAVMALGDALAVVLLRARAF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF ++HP G LG  L +  +D+MH G  +P V++G PL  AI  +SEK  G +AV D
Sbjct: 182 TPDDFALIHPAGSLGKRLLLRVADIMHKGGGLPAVRLGTPLKGAIVSMSEKGLGMLAVTD 241

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               LKG+ T+GD+ R F +  +   LS+++VM  +PK I  + L T A+++++ ++++ 
Sbjct: 242 GQGCLKGVFTDGDLRRLFQECDNFTGLSIDEVMHTHPKTISAERLATEALKVMQANHVNG 301

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V D      G ++  DLL   I+
Sbjct: 302 LLVTDADGVLTGALNMHDLLAARIV 326


>gi|298370088|ref|ZP_06981404.1| arabinose 5-phosphate isomerase [Neisseria sp. oral taxon 014 str.
           F0314]
 gi|298281548|gb|EFI23037.1| arabinose 5-phosphate isomerase [Neisseria sp. oral taxon 014 str.
           F0314]
          Length = 325

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 143/329 (43%), Positives = 211/329 (64%), Gaps = 9/329 (2%)

Query: 18  LMKNS--TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           +M N+   +  A R +  E  GL+ +  +L G     F  A + +   KGRVVITG+GKS
Sbjct: 1   MMGNTEQYLDWARRVLRTEALGLNEIADALDG----GFVRAADALLHCKGRVVITGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+G K+A+T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +
Sbjct: 57  GHVGRKIAATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEITAIMPALK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R ++ LI IT+   S +A HADI +T     E+CP GLAPTTS    +A+GDALA+ LL 
Sbjct: 117 RKNVTLIGITARPASTLARHADIHITAAVSKEACPLGLAPTTSTTAVMALGDALAVVLLR 176

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+ +DF + HP G LG  L +  +D+MH GD++P V  G  L +AI  +SEK  G +
Sbjct: 177 ARAFTPDDFALSHPAGSLGKRLLLRVADIMHGGDALPAVVSGTLLKEAIVRMSEKGLGML 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AV DE  +LKG++T+GD+ R F +  +   L+V+D+M  +PK I  D L T A++ ++ +
Sbjct: 237 AVTDEAGRLKGVLTDGDLRRLFQQRDNFAGLTVDDIMHTSPKTITADKLATEALKHMQAN 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +I+ L+V +      G ++  DLL   I+
Sbjct: 297 HINGLLVTEADGTLTGALNMHDLLMARIV 325


>gi|153011584|ref|YP_001372798.1| KpsF/GutQ family protein [Ochrobactrum anthropi ATCC 49188]
 gi|151563472|gb|ABS16969.1| KpsF/GutQ family protein [Ochrobactrum anthropi ATCC 49188]
          Length = 354

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 175/319 (54%), Positives = 234/319 (73%), Gaps = 1/319 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            +T+  ALR+I  E  GL++LE +L   LS  F  AV++I A +GR+V+TG+GKSGHIGS
Sbjct: 35  EATIASALRTIKTENAGLAALEEALNDGLSGPFVEAVKRIVASRGRLVVTGVGKSGHIGS 94

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGT +FFVH+AEA+HGDLGMI RDD+I+ +SWSG + ELK I+ Y++RF IP
Sbjct: 95  KLAATFASTGTSAFFVHSAEANHGDLGMIDRDDVILAISWSGETAELKGIVNYSQRFRIP 154

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAITS   S +   AD+VL LPK  E+CPHGLAPTTS +MQLAIGDALAIALLE+R F+
Sbjct: 155 LIAITSREDSALGRAADVVLLLPKTAEACPHGLAPTTSTMMQLAIGDALAIALLEARGFT 214

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +   D+MH G+ +PLV++G  L DA+ +L++K FGCV VVD G
Sbjct: 215 PSDFKTFHPGGSLGASLIHIRDIMHRGERLPLVEVGTSLPDAMKVLAQKSFGCVVVVDGG 274

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L GI+T+GDI RN  ++L  L+V+DVM + PK + ++ L T A+  + +++I  L+V 
Sbjct: 275 GDLAGIVTDGDISRNLSRNLAALAVDDVMTRKPKTVDQNMLATAALNTINENHIGALIVT 334

Query: 321 DDCQKAIGIVHFLDLLRFG 339
            +  + IG+VHF DLLR G
Sbjct: 335 -EAGRPIGLVHFHDLLRIG 352


>gi|312797339|ref|YP_004030261.1| Arabinose-5-phosphate isomerase [Burkholderia rhizoxinica HKI 454]
 gi|312169114|emb|CBW76117.1| Arabinose-5-phosphate isomerase (EC 5.3.1.13) [Burkholderia
           rhizoxinica HKI 454]
          Length = 335

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 141/323 (43%), Positives = 192/323 (59%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A   +  E   +  L + L GE    F  AVE + A KGRVV++GIGKSGHI  K
Sbjct: 17  RALQLAQHVLDIEAEAIRGLSTRLNGE----FVVAVEMLLACKGRVVVSGIGKSGHIARK 72

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+TLASTGTP+FFVH AEASHGDLGM+T DD+ I LS SG S+EL  IL   +R    L
Sbjct: 73  LAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGLSNSGESEELIEILPLIKRLGAKL 132

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T   +S +A  AD+ L    E E+CP  LAPT S    LA+GDALA+A+L++R FS 
Sbjct: 133 IAVTGRPESSLAKLADVHLNARVEKEACPLNLAPTASTTAALALGDALAVAVLDARGFSA 192

Query: 202 NDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HPGG LG   +    DVM +GD +P V +   + DA+  ++ KR G  A+VD  
Sbjct: 193 DDFARSHPGGTLGRRLLTYVRDVMRTGDEVPRVTLCATVRDALFEITAKRLGMTAIVDGD 252

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +++GI T+GD+ R      D+  L + DVM   P+ I    L   A++L+ +  I+ ++
Sbjct: 253 SRVEGIFTDGDLRRVLEHKGDILGLPITDVMTHKPRTISAGQLAVEAVELMERFRINQML 312

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VV      IG ++  DL    +I
Sbjct: 313 VVGADGMLIGALNTHDLFSAKVI 335


>gi|325280333|ref|YP_004252875.1| KpsF/GutQ family protein [Odoribacter splanchnicus DSM 20712]
 gi|324312142|gb|ADY32695.1| KpsF/GutQ family protein [Odoribacter splanchnicus DSM 20712]
          Length = 321

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 183/320 (57%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A + I  E   + +L   +  +    F   V  I   KGRV++TGIGKS  I  K+ +
Sbjct: 6   EVAKKVIADEALAIQNLARFIDDD----FEKVVRLIYNTKGRVIVTGIGKSAIIAQKIVA 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI-PLIA 143
           TL STGTP+ F+HAA+A HGDLGMI  DD++I +S SG++ E+K ++   R      ++A
Sbjct: 62  TLNSTGTPAVFMHAADAIHGDLGMICHDDVVICISKSGNTPEIKVLVPLIRNVGNEQIVA 121

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + S   S +A +A  VL    + E+CP+ LAPT S   QL +GDALAI L++ R+FS  D
Sbjct: 122 MVSNTDSFLAKNAAYVLKAQVDREACPNNLAPTNSTTAQLVMGDALAICLIQCRSFSSRD 181

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   HPGG LG         +   D+ P V +   +   I  +S  R G VAV D    L
Sbjct: 182 FAKYHPGGSLGKRLYTRVSDVFDQDNRPYVSLEDGIRKVILEMSGGRLGAVAVTDAEGGL 241

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT+GD+ R   K  D++ L   D+M  +PK I E+ L   A Q + Q++I+ L+VVD
Sbjct: 242 LGIITDGDLRRMLEKYEDVDGLKARDIMSVSPKTIQEEELAYNAFQKMEQNSITQLVVVD 301

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + +K  G+VH  D+LR G++
Sbjct: 302 EDKKYKGMVHIHDILREGVV 321


>gi|163803750|ref|ZP_02197607.1| putative polysialic acid capsule expression protein [Vibrio sp.
           AND4]
 gi|159172434|gb|EDP57303.1| putative polysialic acid capsule expression protein [Vibrio sp.
           AND4]
          Length = 323

 Score =  336 bits (863), Expect = 2e-90,   Method: Composition-based stats.
 Identities = 124/319 (38%), Positives = 194/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  E   L  L+         QF  A + I +  G+VV+ G+GKSGHIG+K+A+T
Sbjct: 10  AAKQVLDIEISALQQLDQY----FDHQFEQACDLILSNNGKVVVMGMGKSGHIGTKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EA+HGDLGMI+  D++I +S SG S E+ ++    +R +I +I++T
Sbjct: 66  LASTGTSAFFVHPGEAAHGDLGMISAGDIVIAISNSGESHEILSLFPVLKRLNIKIISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            +  S +A  +D+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F   DF 
Sbjct: 126 GKPASNMAKLSDLHLQITVPKEACPLGLAPTSSTTATLVMGDALAVALLQARGFRAEDFA 185

Query: 206 VLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HP G     L +  SD+MH G+++P V     + DA+  +SEK  G  A+VDE   + 
Sbjct: 186 LSHPGGTLGKKLLLKLSDIMHFGNALPKVPPNALIRDALLEISEKGLGMTAIVDEHDAML 245

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D++T ++++VM ++P     + L    + L++  NI+ L++ DD
Sbjct: 246 GIFTDGDLRRTLDKRIDIHTTTIDEVMTQSPTTAHPEMLAVEGLNLMQDKNINALILCDD 305

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 306 -NKIVGALNMHDLLKAGVM 323


>gi|253701215|ref|YP_003022404.1| KpsF/GutQ family protein [Geobacter sp. M21]
 gi|251776065|gb|ACT18646.1| KpsF/GutQ family protein [Geobacter sp. M21]
          Length = 322

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 192/324 (59%), Gaps = 10/324 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSK 81
            ++ A R I  E   L +LE+S+ G     F  AV  I   + GRVV+TG+GKSG IG K
Sbjct: 2   IIEEAKRVIRVEAEALLNLEASING----AFEQAVRMILNSETGRVVVTGMGKSGLIGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    L
Sbjct: 58  IASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F  
Sbjct: 118 IAMAGNPASTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKA 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +   D+MHSG+++PLV     + +A+  ++ K  G   V  + 
Sbjct: 178 EDFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDD 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+IT+GD+ R   K  D+  L   ++M    K I  D L   A+Q + Q++I+ L 
Sbjct: 238 GALIGVITDGDLRRALGKGLDIINLPAAELMKAGAKRIRRDELAARALQQMEQYSITSLF 297

Query: 319 VVDDC--QKAIGIVHFLDLLRFGI 340
           V DD   +  +GIVH  DLL+ GI
Sbjct: 298 VFDDDKAKAPVGIVHLHDLLKAGI 321


>gi|332664725|ref|YP_004447513.1| KpsF/GutQ family protein [Haliscomenobacter hydrossis DSM 1100]
 gi|332333539|gb|AEE50640.1| KpsF/GutQ family protein [Haliscomenobacter hydrossis DSM 1100]
          Length = 324

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 125/325 (38%), Positives = 188/325 (57%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +KN  +  A ++I  E   L  L +SL       F   VE I A  GRV++TGIGKS  I
Sbjct: 4   LKNIILSTARQTIEIEAATLQDLRNSL----DEGFVATVEAIYAATGRVILTGIGKSAII 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+ +TL STGTP+ F+HAA+A HGDLGMI   D++I LS SG + E+K ++   +   
Sbjct: 60  AQKIVATLNSTGTPAIFLHAADAIHGDLGMIQVQDVVICLSKSGETPEIKVLVPLIKNLG 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI + S   S +A  A  +L  P + E+ P+ LAPT S   Q+A+GDALA +L   R 
Sbjct: 120 TMLIGMVSNKDSYLAKQAQFILHTPIDREADPNNLAPTASTTAQMAMGDALATSLCALRG 179

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF   HPGG LG         +++ ++ P+V     +   I  ++ KR G  AVVD
Sbjct: 180 FSPKDFAQFHPGGSLGKQLYLRVSDLYTHNARPMVDPATGIKRTILEITSKRLGATAVVD 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +K+ GI+T+GD+ R   +  +   +  +D+M  +PK I    +   A++++R+++IS 
Sbjct: 240 TDEKVLGIVTDGDLRRMLERLDNWTDVCAQDIMSVHPKTIFAHAMAVHALEIMRKYSISQ 299

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+VVD+ +K +G+VH  DL+R GI+
Sbjct: 300 LLVVDEEEKYVGVVHLHDLIREGIV 324


>gi|71280547|ref|YP_271186.1| KpsF/GutQ family protein [Colwellia psychrerythraea 34H]
 gi|71146287|gb|AAZ26760.1| KpsF/GutQ family protein [Colwellia psychrerythraea 34H]
          Length = 321

 Score =  336 bits (863), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 125/320 (39%), Positives = 192/320 (60%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   I  E++ ++ L   +       F  A + +   KGRV++ G+GKSGHIG K+A+
Sbjct: 6   ELAKNVIEIEQQAIAELVQFI----DDNFELACQLMFHCKGRVIVIGMGKSGHIGGKIAA 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGM+T +D+++ +S SG + E+ AI+   +R    LI++
Sbjct: 62  TLASTGTPSFFVHPGEASHGDLGMVTSNDVVLTISNSGETSEVLAIIPVIKRIGAKLISM 121

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD  + +    E+CP GL PT+S    L +GDALA+ALL +R+F+  DF
Sbjct: 122 TGNTESTLAKLADTHVCIKVSAEACPLGLTPTSSTTATLVMGDALAVALLNARDFTAEDF 181

Query: 205 YVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG  L +  SD+MH  D +P++     + DA+  +S K  G  A+V+E Q+L
Sbjct: 182 ALSHPGGSLGKRLLLRLSDIMHKDDRVPMISENALIKDALVEMSLKGLGMTAIVNEQQQL 241

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R      D+++ S+  VM  NP V   D L   A++++    I+ L++VD
Sbjct: 242 VGLFTDGDLRRVLDNRIDIHSESINTVMTHNPSVAQSDMLAAQALKIMEDKKINGLIIVD 301

Query: 322 DCQKAIGIVHFLDLLRFGII 341
                +G ++  D L  G++
Sbjct: 302 SNNIPVGAMNMHDFLSSGVL 321


>gi|225075760|ref|ZP_03718959.1| hypothetical protein NEIFLAOT_00776 [Neisseria flavescens
           NRL30031/H210]
 gi|224952926|gb|EEG34135.1| hypothetical protein NEIFLAOT_00776 [Neisseria flavescens
           NRL30031/H210]
          Length = 324

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 139/321 (43%), Positives = 204/321 (63%), Gaps = 7/321 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E  GL  + ++L       F  A E +   KGRVVI G+GKSGHIG K+A
Sbjct: 8   LDWARDVLNMEAEGLHEIAAAL----DDNFVHAAEALLHCKGRVVIAGMGKSGHIGRKMA 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T+ASTGTP+FFVH AEA+HGDLGMI  +D+++ +S SG SDE+ AI+   +R +I LI 
Sbjct: 64  ATMASTGTPAFFVHPAEAAHGDLGMIVDNDVVVAISNSGESDEIAAIIPALKRKNITLIC 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +A HADI +T     E+CP GLAPT+S    +A+GDALA+ LL++R F+ +D
Sbjct: 124 ITARPDSTMAHHADIHITASVSKEACPLGLAPTSSTTAVMALGDALAVVLLQARAFTPDD 183

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F + HP G LG  L +  +D+MH  +++P V +G PL +AI  +SEK  G +AV D   +
Sbjct: 184 FALSHPAGSLGKRLLLRVADIMHKDEALPAVLLGTPLKEAIVRMSEKGLGMLAVTDAEGR 243

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKG+ T+GD+ R F +      L V+D+M  +PK I  D L T A++ ++  +++ L+VV
Sbjct: 244 LKGVFTDGDLRRLFQERDSFAGLKVDDIMHASPKTISADRLATEALKAMQSGHVNGLLVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           ++    IG ++  DLL   I+
Sbjct: 304 EENGVLIGALNMHDLLMARIV 324


>gi|320529930|ref|ZP_08031007.1| putative arabinose 5-phosphate isomerase [Selenomonas artemidis
           F0399]
 gi|320137948|gb|EFW29853.1| putative arabinose 5-phosphate isomerase [Selenomonas artemidis
           F0399]
          Length = 322

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 128/323 (39%), Positives = 193/323 (59%), Gaps = 10/323 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A+ ++  E + ++ L+  +  E    F  AV  I   K RVV+TG+GKSGH+G K+A+
Sbjct: 4   EKAVETLDLEAQAVARLKERIDDE----FEAAVRAILECKARVVVTGMGKSGHVGRKIAA 59

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R    +IA+
Sbjct: 60  TLASTGTPAFFMHPAEAFHGDLGMVTTDDIVIAISNSGESNEVVNILSIIHRIGARIIAM 119

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
               +S +   AD  + +  E E+CP GLAPT+S    LA+GDA+A+AL+ +R+F + D+
Sbjct: 120 CGRRQSQLGRSADFYIDIGVEREACPLGLAPTSSTTATLAMGDAIAMALMAARDFKKEDY 179

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  ++VMH+ D  P+V       DA+ ++++K  G  +VVD   K 
Sbjct: 180 ALFHPGGALGRRLLLTVANVMHTSDENPVVSYHTSAKDALFVMTDKGLGAASVVDANGKF 239

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
            G++T+G I R   KD       V+++M   P  I  D +   A+ ++  H    ++VL 
Sbjct: 240 IGLVTDGIIRRALAKDYTFLDEEVQNIMFATPLTIAPDKMAAAALHVMEAHKPRPVTVLP 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD     +GIVH  DLLR G++
Sbjct: 300 VVDAAGVPVGIVHLTDLLRQGVV 322


>gi|254225918|ref|ZP_04919520.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621544|gb|EAZ49876.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 326

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI +I++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQTRGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|332286599|ref|YP_004418510.1| hypothetical protein PT7_3346 [Pusillimonas sp. T7-7]
 gi|330430552|gb|AEC21886.1| hypothetical protein PT7_3346 [Pusillimonas sp. T7-7]
          Length = 329

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 131/331 (39%), Positives = 194/331 (58%), Gaps = 7/331 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K  S   +  +  A R+  +E + L +L + L       F  AV  + A +GR+V+TGIG
Sbjct: 3   KTPSTAGHDALASAHRTFTSEIQALQALSARL----DDSFQQAVTMLLACQGRIVVTGIG 58

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHI  K+A+TLASTGTP+FF+H AEA HGDLGM+T  D+++ +S+SG++ EL  +L  
Sbjct: 59  KSGHIARKIAATLASTGTPAFFMHGAEAIHGDLGMLTGQDIVLAISYSGTAAELITVLSV 118

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R    LI+IT   +S +A  AD+ L    E E+CP  LAPT+S    L +GDA+A+A 
Sbjct: 119 VKRMGAQLISITGNPQSELALSADLHLDAHVEQEACPLNLAPTSSTTAALVLGDAIAVAC 178

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           LE+R FS  DF   HPGG LG   +    DVM  G+++P+V+   P+ +A+  +S K  G
Sbjct: 179 LEARGFSREDFARSHPGGALGRRLLTFVHDVMRQGNALPIVQADTPVAEALVEMSSKGMG 238

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              V+D+ +K  GI T+GD+ R   +  D+  LSV   M ++PK I    L   A   + 
Sbjct: 239 MAIVLDDNRKPVGIFTDGDLRRLIARHGDIRPLSVSQGMSRDPKTIGPSALAVEAATQMD 298

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++ ++VVD+    +G +H  DLL   +I
Sbjct: 299 AGRLNQMLVVDESGLLLGALHMHDLLAAKVI 329


>gi|290968951|ref|ZP_06560486.1| putative arabinose 5-phosphate isomerase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290780907|gb|EFD93500.1| putative arabinose 5-phosphate isomerase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 323

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 129/326 (39%), Positives = 196/326 (60%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             V+ A   ++ E +G+ +L   L       F  AV+ I A  GRV++TG+GKSGHI  K
Sbjct: 2   DIVETAKDVLLQEAKGIEALVPRLNQ----SFINAVQLILASSGRVIVTGMGKSGHIARK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TL+STGTPS F+H  EA HGDLGM+T +D++   S SG + E+  IL   +R   P+
Sbjct: 58  VAATLSSTGTPSVFLHPGEAIHGDLGMVTANDVVTAFSNSGETMEILNILPSLKRIGAPI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A +A+++L +  E E+CP GLAPTTS    LA+GDALA+ LL   +F++
Sbjct: 118 IAVVGNPYSTLAKNAEVILDVAVEKEACPLGLAPTTSTTAALALGDALAVVLLSCHHFTK 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + F V HPGG LG    +  + VMH     P +     + DA+ +++EK  G V+VVD  
Sbjct: 178 DQFAVFHPGGALGRKLLLTVAQVMHKEADNPTISADGTVQDALFLMTEKGLGAVSVVDTA 237

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
            KL G++T+GD+ R      +     ++ +M KNP+ I  D L   A+ ++ ++    I+
Sbjct: 238 GKLIGLVTDGDVRRGLETGANFLQWPLDAMMTKNPRQIRADRLAAEALHIMEKNQPRPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD+  +A+G+VH  DLL+ G++
Sbjct: 298 VLPVVDETGQAVGMVHITDLLKQGVV 323


>gi|254251395|ref|ZP_04944713.1| KpsF/GutQ [Burkholderia dolosa AUO158]
 gi|124894004|gb|EAY67884.1| KpsF/GutQ [Burkholderia dolosa AUO158]
          Length = 352

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 140/324 (43%), Positives = 191/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G     F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 33  DRALALARDVLDIEADAVRALRDQLDG----GFVQAVALLLGCRGRVVVSGIGKSGHIAR 88

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL   +R    
Sbjct: 89  KIAATLASTGTPAFFVHPAEASHGDLGMVTSDDVFIGISYSGESEELVAILPLVKRIGAK 148

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT   +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F 
Sbjct: 149 LIAITGRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFG 208

Query: 201 ENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG   +    DVM SGD IP V +   L DA+  ++ KR G  AV+  
Sbjct: 209 SEDFARSHPGGALGRRLLTYVRDVMRSGDDIPSVGLDATLSDALFQITAKRMGMTAVIGP 268

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +K+ GI T+GD+ R   +  D  TL + DVM + P+ I  D L   A++L+ +H I+ +
Sbjct: 269 DRKVAGIFTDGDLRRVLARDGDFRTLPIVDVMTREPRTIGPDHLAVEAVELMERHRINQM 328

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     IG ++  DL    +I
Sbjct: 329 LVVDAHGVLIGALNMHDLFSKKVI 352


>gi|163787883|ref|ZP_02182329.1| sugar phosphate isomerase, KpsF/GutQ family protein
           [Flavobacteriales bacterium ALC-1]
 gi|159876203|gb|EDP70261.1| sugar phosphate isomerase, KpsF/GutQ family protein
           [Flavobacteriales bacterium ALC-1]
          Length = 321

 Score =  336 bits (862), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 133/322 (41%), Positives = 191/322 (59%), Gaps = 8/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A  +I  E   + +L   L  +    F  A+E I   KGRV+ITGIGKS  I +K
Sbjct: 6   SILNTAKSTIKLESEAIDNLSELLTED----FPKAIELIYNSKGRVIITGIGKSAIIANK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TL STGTPS F+HAA+A HGDLG+I +DD++I +S SG++ E+K ++   +  +  +
Sbjct: 62  IVATLNSTGTPSVFMHAADAIHGDLGLILKDDVVICISKSGNTPEIKVLVPLIKNANNKM 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT    S +   A+ VL    E E+CP+ LAPTTS   QL +GDA+A+ LLE R FS 
Sbjct: 122 IAITGNTDSFLGQQANYVLNTYVEQEACPNNLAPTTSTTAQLVMGDAIAVCLLELRGFSS 181

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG       + + S +  P V +   L + I  ++EK  G  AVVD  +
Sbjct: 182 KDFAKYHPGGALGKRLYLRVNDLSSQNLKPQVGLETSLKEVIVEITEKMLGVTAVVD-NE 240

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           K+ GIIT+GD+ R   K  D+  L  +D+M +NP+ I ED +   A +++ ++ IS L+V
Sbjct: 241 KIVGIITDGDLRRMLSKSDDITGLKAKDIMSENPRRIEEDAMAVDAKEMMEEYGISQLLV 300

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
                K +GIVH  DL++ GII
Sbjct: 301 A-HNDKYVGIVHLHDLIKEGII 321


>gi|197117989|ref|YP_002138416.1| arabinose-5-phosphate isomerase [Geobacter bemidjiensis Bem]
 gi|197087349|gb|ACH38620.1| arabinose-5-phosphate isomerase [Geobacter bemidjiensis Bem]
          Length = 322

 Score =  336 bits (861), Expect = 3e-90,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 193/324 (59%), Gaps = 10/324 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSK 81
            ++ A R I  E   L +LE+S+ G     F  AV+ I   + GRVV+TG+GKSG IG K
Sbjct: 2   IIEEAKRVIRVEAEALLNLEASING----AFEQAVQMILNSETGRVVVTGMGKSGLIGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +AST+ASTGTP+FF+H AE  HGDLGMI + D++I +S SG +DE+  IL   +R    L
Sbjct: 58  IASTMASTGTPAFFLHPAEGIHGDLGMIMKGDVVIAISNSGETDEVVKILPIIKRLGASL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A   DI L +  + E+CP GLAPT S  + LA+GDA+A+ALL SR F  
Sbjct: 118 IAMAGNPTSTLAKSGDIFLDISVKEEACPLGLAPTASTTVTLAMGDAIAVALLVSRGFKA 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +   D+MHSG+++PLV     + +A+  ++ K  G   V  + 
Sbjct: 178 EDFAMFHPGGALGRRLLLRVQDIMHSGEALPLVNEKTLMREALFTITSKGLGITGVTSDD 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+IT+GD+ R   K  D+  L   ++M    K I  + L   A+Q + Q++I+ L 
Sbjct: 238 GALIGVITDGDLRRALGKGLDIINLPAAELMKAGAKRINREELAARALQQMEQYSITSLF 297

Query: 319 VVDDC--QKAIGIVHFLDLLRFGI 340
           V DD   +  +GIVH  DLL+ GI
Sbjct: 298 VFDDDKAKAPVGIVHLHDLLKAGI 321


>gi|260577297|ref|ZP_05845270.1| KpsF/GutQ family protein [Rhodobacter sp. SW2]
 gi|259020478|gb|EEW23801.1| KpsF/GutQ family protein [Rhodobacter sp. SW2]
          Length = 321

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 133/322 (41%), Positives = 189/322 (58%), Gaps = 9/322 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +    R I  E   L+ L + L       F  AVE I   +GRV++ G+GKSGHI 
Sbjct: 5   TTDFLTTGRRVITREADALAMLSAHL----GESFGKAVEMILQSQGRVIVCGMGKSGHIA 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+ FVH AEASHGDLGM+ R D++++LS SG + EL  ++ + RRF+I
Sbjct: 61  RKIAATFASTGTPAQFVHPAEASHGDLGMVMRGDVVLLLSNSGETPELSDMIAHTRRFAI 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I +     S +   AD+ + LP   E+C  G+ PTTS  M LA+GDALAIAL+E R F
Sbjct: 121 PMIGVAGREGSTLLRQADVAILLPPAAEACDQGIVPTTSTTMTLALGDALAIALMEHRQF 180

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + + F + HPGGKLG       D+MH    +PLV +  P+ +A+  +S + FG V V D 
Sbjct: 181 TPDQFRIFHPGGKLGARLTLVRDLMH--VDLPLVPLAAPMSEALLTMSRQGFGVVGVTDA 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L GI+T+GD+ R+    L +L+ E VM + P+ I    L   A+ ++ +  I+ L V
Sbjct: 239 DGYLAGIVTDGDLRRHME-GLLSLTAEQVMTRAPRTIGPQALAEKAVAVMNEKKITSLFV 297

Query: 320 VDDCQ--KAIGIVHFLDLLRFG 339
           VD      A+G++H  D LR G
Sbjct: 298 VDPEGSRAAVGLIHIHDCLRAG 319


>gi|126724659|ref|ZP_01740502.1| Sugar phosphate Isomerase [Rhodobacterales bacterium HTCC2150]
 gi|126705823|gb|EBA04913.1| Sugar phosphate Isomerase [Rhodobacterales bacterium HTCC2150]
          Length = 323

 Score =  336 bits (861), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 137/322 (42%), Positives = 192/322 (59%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           KN  +    R +  E   LS L +SL       F  AV+ I    GRV++ G+GKSGHIG
Sbjct: 6   KNLLLDVGRRVVSREAEALSKLNASLDQ----SFADAVQMILNATGRVIVCGMGKSGHIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+ FVH AEASHGDLGM+   D+++VLS SG + EL  ++ Y RRF I
Sbjct: 62  RKIAATFASTGTPAHFVHPAEASHGDLGMMAAGDVVLVLSNSGETPELADVISYTRRFQI 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I +     S +   AD+ L LP   E+C  G+ PTTS  M LA+GDALAIAL+E R F
Sbjct: 122 PMIGVAGRINSTLLNQADVSLVLPAAEEACDQGIVPTTSTTMTLALGDALAIALMEHRKF 181

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  +F   HPGGKLG      +D+MH GD +P V+ G  + +A+  +S+K FG   V+D 
Sbjct: 182 TPENFRQFHPGGKLGAQLSTVNDLMHRGDELPFVESGSKMSEALLTISQKGFGVAGVLDS 241

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L G IT+GD+ R+  + L  L+ ++VM ++P+ I    +   A+ ++    I+ L V
Sbjct: 242 NGTLLGAITDGDLRRHM-QGLLDLTADEVMTRDPRTIASTAMAQEAVAVMNTMKITCLFV 300

Query: 320 VDD-CQKAIGIVHFLDLLRFGI 340
            D   Q  +GI+H  D LR G+
Sbjct: 301 QDAPDQTPVGILHIHDCLRAGV 322


>gi|229524506|ref|ZP_04413911.1| arabinose 5-phosphate isomerase [Vibrio cholerae bv. albensis
           VL426]
 gi|229338087|gb|EEO03104.1| arabinose 5-phosphate isomerase [Vibrio cholerae bv. albensis
           VL426]
          Length = 326

 Score =  335 bits (860), Expect = 4e-90,   Method: Composition-based stats.
 Identities = 131/319 (41%), Positives = 194/319 (60%), Gaps = 9/319 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAST 85
           A + +  E   L  LE  +  +    F  A   I A + G+VV+ G+GKSGHIG K+A+T
Sbjct: 13  AKQVLATEIHALQQLEQYINDD----FARACAMILANQTGKVVVMGMGKSGHIGKKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A+L   +R SI ++++T
Sbjct: 69  LASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILALLPVLKRLSIRVLSMT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  ADI L +    E+CP  LAPT+S    L +GDALA+AL+++R F+  DF 
Sbjct: 129 GNPNSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HPGG LG    +  +D+MHSGD++P V     + DA+  +S+K  G  A+VDE   L 
Sbjct: 189 LSHPGGALGRKLLLKLNDIMHSGDALPKVAPQALIRDALLEISQKGLGMTAIVDEQDTLL 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  D+++  + DVM + P V   + L    + L++   I+ LM+V +
Sbjct: 249 GIFTDGDLRRILDKRIDIHSTVIADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-E 307

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +G ++  DLL+ G++
Sbjct: 308 NNKLVGALNMHDLLKAGVM 326


>gi|126738421|ref|ZP_01754126.1| arabinose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
 gi|126720220|gb|EBA16926.1| arabinose 5-phosphate isomerase [Roseobacter sp. SK209-2-6]
          Length = 322

 Score =  335 bits (859), Expect = 6e-90,   Method: Composition-based stats.
 Identities = 131/323 (40%), Positives = 190/323 (58%), Gaps = 7/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A +    E   L +L  S        F  A   I +  GRV+++GIGKSGHIG
Sbjct: 4   NEQFLATARQVASDEAHALEALAESFDER----FAEAARLILSATGRVIVSGIGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+ FVH AEASHGDLGM+++ D+++ +S SG + EL  +L + RRF I
Sbjct: 60  HKIAATLASTGTPAHFVHPAEASHGDLGMLSKGDVVLAISNSGEAPELANLLAFTRRFGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI ++S+ +S +   AD+ L +P   E+C +G+ P+ S  + LA+GDALAIA+++ R+F
Sbjct: 120 PLIGLSSKPQSTLMTQADVHLQIPAMGEACGYGIVPSISTTLTLAMGDALAIAIMKHRDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              +F   HPGGKLG      SD+MHSG+++PLV     + + +  +S+K FG   V+DE
Sbjct: 180 RPENFRDFHPGGKLGAQLSKVSDLMHSGEALPLVTSATAMSETLIEISQKGFGVAGVIDE 239

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            + L GIIT+GD+ R+    L       VM   P  I    L   A+ ++ Q  I+ L V
Sbjct: 240 NKLLLGIITDGDLRRHME-GLLQNDASAVMTAAPTTIAPTALAEEALAIMNQRKITCLFV 298

Query: 320 VD--DCQKAIGIVHFLDLLRFGI 340
            D  D  K  G++H  D LR G+
Sbjct: 299 TDPEDNDKVKGLLHIHDCLRAGL 321


>gi|254490066|ref|ZP_05103259.1| sugar isomerase, KpsF/GutQ family [Methylophaga thiooxidans DMS010]
 gi|224464730|gb|EEF80986.1| sugar isomerase, KpsF/GutQ family [Methylophaga thiooxydans DMS010]
          Length = 325

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 124/320 (38%), Positives = 194/320 (60%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q AL  +  E   +++L   +       F  A + + A  GR+V+ G+GKSGHIG K+A+
Sbjct: 10  QLALAVLDTEIEAVTALRERVN----EHFLKACDFMLACSGRIVVIGMGKSGHIGGKIAA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FFVH  EASHGD+GMIT  D+++ LS SG + E+  IL   +R  +PLIA+
Sbjct: 66  TLASTGTPAFFVHPGEASHGDMGMITSKDVVLALSNSGETSEILTILPLIKRLGVPLIAM 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + +  S +A  A   + +  E E+CP GLAPT+S    L +GDALA+ALLE+R F+  DF
Sbjct: 126 SGKPHSTLAKCASAHIDVSVEREACPLGLAPTSSTTAALVMGDALAVALLEARGFTAEDF 185

Query: 205 YVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HP G     L +  SD+MH+G+ +P V+    + +A+  +S K  G  AV +   ++
Sbjct: 186 AMSHPGGLLGRRLLLRVSDIMHTGNDVPQVEESVLISEALIEMSAKGLGMTAVTNHQAEI 245

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   +  +++T  + + + +N K    D L   A++L+++  I+ L++ D
Sbjct: 246 IGIFTDGDLRRVLAQEINIHTQPLSNYVSRNCKTGHPDMLAAEALELMQRFKINALLITD 305

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           D Q+  G ++  DLLR G++
Sbjct: 306 DKQQLQGAINMHDLLRAGVV 325


>gi|170750715|ref|YP_001756975.1| KpsF/GutQ family protein [Methylobacterium radiotolerans JCM 2831]
 gi|170657237|gb|ACB26292.1| KpsF/GutQ family protein [Methylobacterium radiotolerans JCM 2831]
          Length = 341

 Score =  335 bits (859), Expect = 7e-90,   Method: Composition-based stats.
 Identities = 144/317 (45%), Positives = 200/317 (63%), Gaps = 1/317 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
              +RS+      L     + QG L   F  AV+ I   KGRV+++GIGKSGH+G K+A+
Sbjct: 26  DLGIRSLQLGIAALQEASVAFQGRLGAAFEEAVQTILQSKGRVIVSGIGKSGHVGRKIAA 85

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT +FFVH  EASHGDLGMI RDD+II LSWSG + EL  ++ ++RRFSIPL+AI
Sbjct: 86  TLASTGTHAFFVHPTEASHGDLGMIARDDVIIALSWSGETAELSDLVGFSRRFSIPLVAI 145

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +   AD++L LP+  ESCPH LAPT+S+++QLA+GDALA+ALLE R F+   F
Sbjct: 146 TRNGESTLGKAADVLLELPRVRESCPHDLAPTSSSLIQLALGDALAVALLERRGFTSARF 205

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + LHPGG L         VMH    +PLV     + + +  ++ +R+GCV V D   +L 
Sbjct: 206 HTLHPGGTLAARLRTVQQVMHGPQDMPLVHETALMSEVLIEIAARRYGCVGVTDAAGRLV 265

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ R+    L    V  VM ++P  +    L   A++L+ +  I+ +  V D  
Sbjct: 266 GIVTDGDLRRHMGPALLDTPVSTVMTRDPVTVEPHKLAQAALELMNRRLITAVFAVTD-G 324

Query: 325 KAIGIVHFLDLLRFGII 341
           + +GIVH  DLLR GI+
Sbjct: 325 RPVGIVHVHDLLRVGIV 341


>gi|71065482|ref|YP_264209.1| sugar isomerase [Psychrobacter arcticus 273-4]
 gi|71038467|gb|AAZ18775.1| probable sugar isomerase [Psychrobacter arcticus 273-4]
          Length = 330

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 131/333 (39%), Positives = 203/333 (60%), Gaps = 7/333 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +     +L     +  A+ +I  EK  L+ L   +       F  A + I A +GRVV+T
Sbjct: 1   MNSPERNLTHEQFISTAIDAINTEKAALALLTEQIDDR----FAQACDIILACQGRVVVT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG IG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D+++ +S SG SDE+K +
Sbjct: 57  GMGKSGLIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKML 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R +IPLI+I+ + + ++   ADI+LTL K  E+CP  LAPT+S    LA+GDALA
Sbjct: 117 LPVVKRLNIPLISISRDKRGMLPHAADIILTLGKSQEACPLNLAPTSSTTATLALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSG-DSIPLVKIGCPLIDAITILSE 248
           +AL+ +RNF+  DF + HP G LG        D+MH+  + +PL+    PL +A+ I+S 
Sbjct: 177 VALVHARNFTSEDFALSHPAGALGRQLLTRVEDLMHTKSEDLPLINQQAPLQEALFIMSA 236

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQ 307
            R G   V D+  K+ GI T+GD+ R   K ++    + ++M+ NP+ I +    + A+ 
Sbjct: 237 GRLGMTVVTDDKSKVVGIFTDGDLRRGLEKGIDLQTPMRELMVSNPRRINKSMRASDALS 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ ++ IS L++VDD Q+   I+   DLL+ G+
Sbjct: 297 VMNENAISQLLIVDDEQRLEAIITVHDLLQAGV 329


>gi|126463574|ref|YP_001044688.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126105238|gb|ABN77916.1| KpsF/GutQ family protein [Rhodobacter sphaeroides ATCC 17029]
          Length = 321

 Score =  334 bits (858), Expect = 8e-90,   Method: Composition-based stats.
 Identities = 146/323 (45%), Positives = 199/323 (61%), Gaps = 9/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A R I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG
Sbjct: 5   TTDFLATARRVIEAETTALTMLGASL----DDSFGAAVETILRARGRVIVSGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF I
Sbjct: 61  RKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDI 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI + S  +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F
Sbjct: 121 PLIGVASRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQF 180

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +   F V HPGGKLG      +D+MH    +PLV +G  + +A+  +S   FG + V   
Sbjct: 181 TPEHFRVFHPGGKLGARLARVADLMH--RDLPLVAMGTSMGEALITMSRLGFGVLGVTGP 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L GIIT+GD+ R+    L +LSVEDVM +NP  I  D L   A+ ++    I+ L V
Sbjct: 239 EGRLAGIITDGDLRRHLD-GLLSLSVEDVMTRNPLTIPPDALAEKAVAVMNARKITSLFV 297

Query: 320 VD--DCQKAIGIVHFLDLLRFGI 340
           V+      A G++H  D LR G+
Sbjct: 298 VNPEGSGAAEGLIHIHDCLRAGV 320


>gi|312881879|ref|ZP_07741646.1| arabinose 5-phosphate isomerase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309370458|gb|EFP97943.1| arabinose 5-phosphate isomerase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 321

 Score =  334 bits (858), Expect = 9e-90,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLAS 84
            A + +  E   L  LE S        F      I A K G+VV+ G+GKSGHIG K+A+
Sbjct: 7   AANKVLTTEINALKKLEHSFNQ----NFIDVCNLILANKAGKVVVMGMGKSGHIGKKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EA+HGDLGM++ +D++I +S SG S E+  +    +R  + +I+I
Sbjct: 63  TFASTGTPAFFVHPGEAAHGDLGMVSPEDIVITISNSGESSEILGLFPVLKRLKVKMISI 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  +D  L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 123 TGKAQSTMAKLSDYHLLIDASEEACPLGLAPTSSTTATLVMGDALAVALLQARGFTAEDF 182

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD++PLV     + DA+  +S+K  G VAVV E + L
Sbjct: 183 ALSHPGGALGRKLLLRLTDIMHTGDALPLVPANTLIKDALIEISQKGLGMVAVVCENESL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R   K  D+++ ++ +VM   P     + L   A+ L+++++IS L++  
Sbjct: 243 VGIFTDGDLRRILDKRIDIHSTAIGEVMTVKPTTANANMLAAEALNLMQENSISGLIIC- 301

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           + +K IG ++  DLL+ G++
Sbjct: 302 EDKKVIGALNMHDLLKAGVL 321


>gi|304437445|ref|ZP_07397404.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
 gi|304369701|gb|EFM23367.1| arabinose 5-phosphate isomerase [Selenomonas sp. oral taxon 149
           str. 67H29BP]
          Length = 326

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 134/330 (40%), Positives = 200/330 (60%), Gaps = 10/330 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +++  Q A+ ++  E   ++ L   +  +    F  A E I A KGRVV+TG+GKSGH
Sbjct: 1   MQESTIRQKAVETLKLEADAVARLTDRVDDD----FEAAAEAILACKGRVVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+FF+H AEA HGDLGM+T DD++I +S SG S+E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPAFFMHPAEAFHGDLGMVTADDIVIAISNSGESNEVVNILSIIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              ++A++   KS +   AD  + +  E E+CP GLAPT S    LA+GDALA+AL+ +R
Sbjct: 117 GARIVAMSGRRKSQLGRSADFYIDIGVEREACPLGLAPTASTTATLAMGDALAMALMAAR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F + D+ + HPGG LG    +  ++VMH+GD  P+V       DA+ ++++K  G V+V
Sbjct: 177 DFKKEDYALFHPGGALGRKLLLTVANVMHTGDENPVVPYHTTAKDALFVMTDKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
           VD   K  G++T+G I R   KD       VE +M   P  I  D +   A+ ++ +H  
Sbjct: 237 VDADGKFIGLVTDGIIRRALAKDYTFLDKDVESIMFATPLTIAPDKMAAAALSVMEKHQP 296

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+DD    +GIVH  DLLR G++
Sbjct: 297 RPVTVLPVIDDAGVPVGIVHLTDLLRQGVV 326


>gi|323498694|ref|ZP_08103684.1| sugar phosphate isomerase [Vibrio sinaloensis DSM 21326]
 gi|323316250|gb|EGA69271.1| sugar phosphate isomerase [Vibrio sinaloensis DSM 21326]
          Length = 321

 Score =  334 bits (857), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 198/320 (61%), Gaps = 9/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-AIKGRVVITGIGKSGHIGSKLAS 84
            AL  +  E   L+ L+     +    F  A E I    +G+VV+ G+GKSGHIG K+A+
Sbjct: 7   AALEVLRTEIDALAQLDQYFNQD----FTRACELIMSNSQGKVVVMGMGKSGHIGKKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           +LASTGT SFFVH  EA+HGDLGMI + D+++ +S SG S E+ A+    +R +I +I++
Sbjct: 63  SLASTGTSSFFVHPGEAAHGDLGMIEKGDIVLAISNSGESSEILALFPVLKRLNISIISM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +A  ADI L +    E+CP GLAPT+S    L +GDALA++LL++R F+ +DF
Sbjct: 123 TGKPQSNMAKLADIHLQITVPKEACPLGLAPTSSTTATLVMGDALAVSLLQARGFTADDF 182

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD +PLV     + DA+  +S+K  G  AVVDE Q L
Sbjct: 183 ALSHPGGALGRKLLLKLSDIMHSGDKLPLVSTDTVVRDALLEISQKGLGMTAVVDEQQNL 242

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R   K  D+++  + DVM  NP V   + L    + L+++ +I+ L++  
Sbjct: 243 MGVFTDGDLRRILDKRVDIHSALIGDVMTVNPTVASPNMLAVEGLNLMQEKSINGLVLC- 301

Query: 322 DCQKAIGIVHFLDLLRFGII 341
              K +G ++  D+L+ G++
Sbjct: 302 QQGKVVGALNMQDMLKAGVM 321


>gi|120434955|ref|YP_860641.1| sugar binding/sugar isomerase domain-containing proteins [Gramella
           forsetii KT0803]
 gi|117577105|emb|CAL65574.1| protein containing SIS and KpsF/GutQ sugar binding or sugar
           isomerase domains [Gramella forsetii KT0803]
          Length = 321

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 136/325 (41%), Positives = 196/325 (60%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           + +  +  A  +I  E   +++LE+ +  E    F  AVE I   +GRVV+TGIGKS  I
Sbjct: 3   LSDQIISTAKETISNEADAIANLENFIDEE----FTKAVEIIYKSEGRVVVTGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +K+ +TL STGTPS F+HAA+A HGDLG++  DD++I +S SG+S E++ ++   + F+
Sbjct: 59  ANKIVATLNSTGTPSIFMHAADAIHGDLGIVQNDDIVICISKSGTSPEIQVLVPLIKNFN 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T   +S +   AD VL    E E+CP+ LAPTTS   Q+ IGDALA+ LL  R 
Sbjct: 119 NTLIALTGNRESFLGKEADFVLNCYVEKEACPNNLAPTTSTTAQMVIGDALAVCLLNLRG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF   HPGG LG         + S + IP V     + +AI  +SEK  G  AV+ 
Sbjct: 179 FSSKDFAKYHPGGSLGKKLYLRVSDITSQNMIPQVSPDTDVANAIIEISEKMLGVTAVL- 237

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  ++ GIIT+GDI R    H+++  L  +D+M +NPK I +DTL   A+ +L +H IS 
Sbjct: 238 ENDEIVGIITDGDIRRMLKDHQEIKGLKAKDIMSENPKTIEQDTLAVEALDVLEKHQISQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+ V +  K  G+VH  +L+R GI+
Sbjct: 298 LLAV-ENGKYAGVVHIHNLIREGIL 321


>gi|332559627|ref|ZP_08413949.1| KpsF/GutQ family protein [Rhodobacter sphaeroides WS8N]
 gi|332277339|gb|EGJ22654.1| KpsF/GutQ family protein [Rhodobacter sphaeroides WS8N]
          Length = 321

 Score =  334 bits (856), Expect = 1e-89,   Method: Composition-based stats.
 Identities = 146/323 (45%), Positives = 199/323 (61%), Gaps = 9/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A R I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG
Sbjct: 5   TTDFLATARRVIEAETTALTMLGASL----DDSFGAAVETILRARGRVIVSGMGKSGHIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TLASTGTP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF I
Sbjct: 61  RKITATLASTGTPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDI 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI + S  +S +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F
Sbjct: 121 PLIGVASRAQSTLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQF 180

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +   F V HPGGKLG      +D+MH    +PLV +G  + +A+  +S   FG + V   
Sbjct: 181 TPEHFRVFHPGGKLGARLARVADLMH--RDLPLVAMGTSMGEALITMSRLGFGVLGVTGP 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L GIIT+GD+ R+    L +LSVEDVM ++P  I  D L   A+ ++    I+ L V
Sbjct: 239 EGRLAGIITDGDLRRHLD-GLLSLSVEDVMTRHPLTIAPDALAEKAVAVMNARKITSLFV 297

Query: 320 VD--DCQKAIGIVHFLDLLRFGI 340
           VD      A G++H  D LR G+
Sbjct: 298 VDPEGSGAAEGLIHIHDCLRAGV 320


>gi|325294808|ref|YP_004281322.1| KpsF/GutQ family protein [Desulfurobacterium thermolithotrophum DSM
           11699]
 gi|325065256|gb|ADY73263.1| KpsF/GutQ family protein [Desulfurobacterium thermolithotrophum DSM
           11699]
          Length = 300

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 128/295 (43%), Positives = 187/295 (63%), Gaps = 2/295 (0%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
            +L   L   F  A++ +   KGRVV+TGIGKSG I  K+A+TL+STGTP+FF+H A+A+
Sbjct: 2   KNLAEHLDENFEKAIDILYKTKGRVVLTGIGKSGLICKKIAATLSSTGTPAFFLHPADAA 61

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGMI  DD +I +S SG + EL  I+   + F IP+IAIT+  +S +A  +D+ L L
Sbjct: 62  HGDLGMIKGDDTVIAISNSGETAELLNIIPIIKSFGIPIIAITNNPESSLAKLSDVTLLL 121

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             + E+CP GLAPTTS    LA+GDA+++AL++ + F   DF   HPGGKLG       D
Sbjct: 122 HVKKEACPLGLAPTTSTTTTLALGDAISVALMKLKKFKSEDFARFHPGGKLGIRLAKVKD 181

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           +M  GDS+P+V     L + I  +S K+ G   V  +  +L GIIT+GD+ R F K ++ 
Sbjct: 182 IMRKGDSVPIVSPETSLKEIIYEISSKKLGATLV-AKNGRLIGIITDGDLRRAFEKQIDF 240

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   ++M KNPK I  +     A++L+ ++ I+VL VV + +K +GI+H  D+L
Sbjct: 241 NMKACELMTKNPKTISGEVFAEKAIELMEKYKITVLPVVKNDKKIVGIIHMHDIL 295


>gi|294787873|ref|ZP_06753117.1| arabinose 5-phosphate isomerase [Simonsiella muelleri ATCC 29453]
 gi|294484166|gb|EFG31849.1| arabinose 5-phosphate isomerase [Simonsiella muelleri ATCC 29453]
          Length = 349

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/325 (43%), Positives = 195/325 (60%), Gaps = 8/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               ++ A +++  E   +  + S +       F  A   I    GRV++ G+GKSGHIG
Sbjct: 30  SYHYIEWAKQALQTEADAIDEIISQINQT----FIQATNAILTCTGRVIVMGMGKSGHIG 85

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVH AEA+HGDLGMI   D+++ LS SG SDE+ AI+   +R  I
Sbjct: 86  RKIAATFASTGTPAFFVHPAEAAHGDLGMIVDGDVVLALSNSGESDEILAIIPALKRRQI 145

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI ITS+  S +A HADI +      E+CP GLAPT+S    LA+GDALAI LL++R F
Sbjct: 146 TLICITSKPNSSMAKHADIHIQAAVSHEACPLGLAPTSSTTAVLALGDALAIVLLKARQF 205

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + +DF + HP G LG    +   DVMHSGD +P V    PL +A+  +SEK  G +AVVD
Sbjct: 206 TTDDFALSHPAGSLGRRLLLTVGDVMHSGDDLPAVMEYTPLKNAVITMSEKGLGMLAVVD 265

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L+GI+T+GD+ R F        L+V DVM  NP  I  + L + A++L++Q  IS 
Sbjct: 266 CSGSLQGILTDGDLRRLFQTRDYFADLTVNDVMKTNPTTITPEKLASEAVKLMKQKRISG 325

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V       IG ++  DLL+  ++
Sbjct: 326 LLVC-KNNILIGALNMHDLLKARVM 349


>gi|319796638|ref|YP_004158278.1| kpsf/gutq family protein [Variovorax paradoxus EPS]
 gi|315599101|gb|ADU40167.1| KpsF/GutQ family protein [Variovorax paradoxus EPS]
          Length = 333

 Score =  334 bits (856), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 136/327 (41%), Positives = 182/327 (55%), Gaps = 7/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + +  A  +   E   +  L++ +       F  AV KI  ++GRVV+ G+GKSGH
Sbjct: 11  VDPEAILARARLTFDIEAEAVLGLKTRV----GPSFVDAVRKILEVRGRVVVMGMGKSGH 66

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTP+ FVH AEASHGDLGMI   DL++ +S SG  +EL  IL   +R 
Sbjct: 67  VGRKIAATLASTGTPAMFVHPAEASHGDLGMIKAVDLVLAISNSGEVEELTVILPVVKRQ 126

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PLIAIT    S +  HADI L      E+CP  LAPT S   Q+A+GDALA+ALL++R
Sbjct: 127 GVPLIAITGRADSTLGRHADITLDAGVSKEACPLNLAPTASTTAQMAMGDALAVALLDAR 186

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   DF   HPGG LG       SDVM S   +P V     L + +  +S K  G  AV
Sbjct: 187 GFGSEDFARSHPGGALGRKLLTHVSDVMRSDAEVPRVAPTATLSELMREMSSKGLGATAV 246

Query: 257 VDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +  GI T+GD+ R      DL  L+  DVM   P+ +  D L   A  L+  H I
Sbjct: 247 VDAEGRAIGIFTDGDLRRKVETGADLRALTAADVMHPGPRTLRADALAVEAADLMENHRI 306

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + ++VVD     IG +   DL+R  +I
Sbjct: 307 TSVLVVDAAGLLIGALSINDLMRAKVI 333


>gi|254462246|ref|ZP_05075662.1| arabinose 5-phosphate isomerase [Rhodobacterales bacterium
           HTCC2083]
 gi|206678835|gb|EDZ43322.1| arabinose 5-phosphate isomerase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 320

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 129/320 (40%), Positives = 190/320 (59%), Gaps = 5/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A R I  E   L+ L      E+   F  AV+ I    GR+++ G+GKSGH+  
Sbjct: 5   SKFLDTARRVIRIEADALALLA----NEVGTPFGQAVQMILDAPGRIIVCGMGKSGHVAR 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTP+ FVH AEASHGDLGM+ + D+ +VLS SG + EL  ++ + RRF IP
Sbjct: 61  KIAATFASTGTPAHFVHPAEASHGDLGMMAKGDVALVLSNSGETPELADVIAHTRRFGIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I + S+  S +   +D+ + LP   E+C  G+ PTTS  M LA+GDA+A+AL+E R+F+
Sbjct: 121 MIGVASKATSTLLTQSDVAIVLPAAEEACGTGVVPTTSTTMTLALGDAMAVALMEHRDFT 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F   HPGGKLG       D+MH+GD++PLV     + + +  +S+K FG V VVD  
Sbjct: 181 PANFRDFHPGGKLGARLSKVGDLMHAGDALPLVAPNTSMGNVLLEISQKGFGVVGVVDTA 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++L+GIIT+GD+ R+    L  LS  DV   +P  +    L   A+ ++    I+ L V 
Sbjct: 241 RQLQGIITDGDLRRHMD-GLLDLSAGDVQTNDPTTVQAGALAEEALGIMNTRKITCLFVT 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D      G++H  D LR G+
Sbjct: 300 DQSGSVEGLLHIHDCLRAGL 319


>gi|330839372|ref|YP_004413952.1| KpsF/GutQ family protein [Selenomonas sputigena ATCC 35185]
 gi|329747136|gb|AEC00493.1| KpsF/GutQ family protein [Selenomonas sputigena ATCC 35185]
          Length = 326

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 131/330 (39%), Positives = 196/330 (59%), Gaps = 11/330 (3%)

Query: 19  MKNSTV-QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK   + + A+ ++  E   +  L  S+  E    F  AVE +     R+V+TG+GKSGH
Sbjct: 1   MKRDVIWEKAVETLSMEAAAVKKLTESVDEE----FCRAVECVLDCTARIVVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TLASTGTPSFF+H AEA HGDLGM+T  D+++ +S SG   E+  IL    R 
Sbjct: 57  VGRKIAATLASTGTPSFFMHPAEAFHGDLGMVTDKDVVLAISNSGEVQEVVKILPVIHRI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A ++D V+ +  EPE+CP GLAPTTS    LA+GDA+A+A++  R
Sbjct: 117 GATIIAMTGNRSSQLAEYSDYVIDIGHEPEACPLGLAPTTSTTATLAMGDAIAVAVMSVR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NF + DF + HPGG LG    +   DVMH+G+  P+V       DA+ +++EK  G V+V
Sbjct: 177 NFKKQDFALFHPGGALGRRLLLKVQDVMHTGEENPVVSGEKTAKDALFVMTEKGLGAVSV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH-- 312
            D   +  G++T+G I R   KD       V ++M   P  I  D L T A+ ++ +H  
Sbjct: 237 TDAAGRFIGLLTDGIIRRALAKDYAFLDEPVHEIMFTEPLTIHADELATAALSVMEKHEP 296

Query: 313 -NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++VL V+D+    +G++H  DLL+ G++
Sbjct: 297 RPVTVLPVIDEKGAPVGMIHLTDLLKQGVV 326


>gi|149202042|ref|ZP_01879015.1| KpsF/GutQ family protein [Roseovarius sp. TM1035]
 gi|149144140|gb|EDM32171.1| KpsF/GutQ family protein [Roseovarius sp. TM1035]
          Length = 327

 Score =  333 bits (855), Expect = 2e-89,   Method: Composition-based stats.
 Identities = 140/316 (44%), Positives = 202/316 (63%), Gaps = 6/316 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   I  E   LS+L +    +L   F   V ++  +KGRV+++G+GKSGHI +K+A+
Sbjct: 17  EIARDVIRIEAEALSALHA----DLPIDFDAVVTRLLEVKGRVIVSGMGKSGHIAAKIAA 72

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTGTP+ +VH  EASHGDLGMITR+D +I++S SG + EL  I+ ++RRF+IPLIAI
Sbjct: 73  TMASTGTPAQYVHPGEASHGDLGMITREDALILISNSGETRELADIIAHSRRFAIPLIAI 132

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +   AD  LTLP  PE+C  G+APTTS    LA+GDALA+A++  R F   +F
Sbjct: 133 TKKPDSTLGQQADFRLTLPNAPEACAIGMAPTTSTTCTLALGDALAVAMMRLRGFERENF 192

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +  S VMHSG ++P+V    P+ + +  ++ K FG  AVV E  +L 
Sbjct: 193 LAFHPGGTLGAQLLRVSSVMHSGAALPVVSAETPMGETLIEMTAKGFGVAAVV-EEGRLM 251

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            +IT+GD+ RN   DL   +  +V  +NP+ IL + LL+ A+ ++  H IS L  VD+  
Sbjct: 252 AVITDGDLRRNLS-DLMARTAGEVATRNPRSILPEALLSEALGVMNTHKISALFAVDESG 310

Query: 325 KAIGIVHFLDLLRFGI 340
           +  G+VH  D+LR G+
Sbjct: 311 QLRGLVHIHDILRAGV 326


>gi|296271691|ref|YP_003654322.1| KpsF/GutQ family protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095866|gb|ADG91816.1| KpsF/GutQ family protein [Arcobacter nitrofigilis DSM 7299]
          Length = 319

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 126/319 (39%), Positives = 197/319 (61%), Gaps = 8/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   ++ E + L         + SF  + AVE +   KG++++TG+GKSG +G+K+A+
Sbjct: 5   EIAKEVLLTEAKELE----RASRDNSFDMNAAVELVYNTKGKLIVTGVGKSGLVGTKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFF+H  EA HGDLGMI +DD ++ +S+SG S+EL  IL + +RF IP+IA+
Sbjct: 61  TLASTGTSSFFLHPTEAMHGDLGMIGKDDTVLAISYSGESEELIQILPHLKRFDIPMIAM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +A +ADI   +    E+CP   APT+S  + +A+GDALA+ L++ RNF ++DF
Sbjct: 121 AKNPNSTLAKYADIFFDINVTKEACPLDTAPTSSTTLTMAMGDALAVCLMKKRNFQKSDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +   + +P+V  G  L DAI  +SE R G V + D+ + + 
Sbjct: 181 ASFHPGGSLGKKLFIKVSDLLRTEELPIVSRGTLLKDAIVRMSEGRLGNVIITDDNE-VI 239

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
           G++++GD+ R    D  +L   VE++   NPKV+  +D L + A++++  + I +L+VVD
Sbjct: 240 GLLSDGDLRRALMDDNFSLECKVEEIATMNPKVLNNKDLLASDALKIIEDYKIQLLVVVD 299

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D  K +G++H  DL+  GI
Sbjct: 300 DSNKLVGVLHIHDLIEAGI 318


>gi|146298046|ref|YP_001192637.1| KpsF/GutQ family protein [Flavobacterium johnsoniae UW101]
 gi|146152464|gb|ABQ03318.1| KpsF/GutQ family protein [Flavobacterium johnsoniae UW101]
          Length = 321

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 190/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K + +  A ++I++E   ++ L   L       F  AV++I   KGR+++TGIGKS  I 
Sbjct: 4   KENILAIAKKTILSESEAITKLIDFL----DENFFEAVQRIYETKGRLIVTGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T  STGTPS F+HAAEA HGDLGMI  DD+II +S SG+S E+K ++   +RF  
Sbjct: 60  QKMVATFNSTGTPSMFLHAAEAIHGDLGMIQNDDIIICISKSGNSPEIKVLVPLLKRFGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAIT    S +A  +D VL    + E+CP  LAPT S   QL +GDALA+ L+E R+F
Sbjct: 120 TLIAITGNTTSFLAKGSDFVLNTTVDTEACPINLAPTNSTTAQLVMGDALAVCLMEMRDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF V HPGG LG   +     M      P V     +   I  +SEKR G  AV+ E
Sbjct: 180 KPEDFAVYHPGGALGKKLLLRVKDMIEHSLKPTVTPDTSVKKVIFEISEKRLGVTAVI-E 238

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GIIT+GDI R  +    +  L+ +D+M KNPKV+  +T+   A+ +L   +I+ L
Sbjct: 239 NDKIVGIITDGDIRRMLNDVDTIADLTAKDIMSKNPKVVSSETMAVDALNILEDFSITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D+  +  G++H  D+L+ GI+
Sbjct: 299 IVADN-GEYKGVLHLHDILKEGIV 321


>gi|94968087|ref|YP_590135.1| KpsF/GutQ family protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94550137|gb|ABF40061.1| KpsF/GutQ family protein [Candidatus Koribacter versatilis
           Ellin345]
          Length = 338

 Score =  333 bits (854), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 132/321 (41%), Positives = 183/321 (57%), Gaps = 11/321 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E   L  L   + G ++  F  AV+ +    GRVV++G+GKSG IG K+A+
Sbjct: 13  KTGENVVRIEAEALRELADRIAGPMAADFQRAVDLLACCGGRVVVSGMGKSGLIGRKMAA 72

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T +STG P+ F+H AEA HGDLGMI R D++I LS SG ++E+  +L   +R   P+I +
Sbjct: 73  TFSSTGAPALFLHPAEAMHGDLGMIARGDVVIALSASGETEEILNLLPTIKRLGAPVITM 132

Query: 145 TSE-------NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           T +        +S +A  AD+ L      E+C  GLAPT S    LA+GDALA+AL E R
Sbjct: 133 TCDNLYANGAKRSTLAQAADVALDCSIAQEACTLGLAPTASTTTMLALGDALAMALAEKR 192

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F E DF  LHPGGKLG      S +MH+GD+IP V     + D I  +S K+ G   VV
Sbjct: 193 GFKEEDFANLHPGGKLGKRLTKVSALMHAGDAIPRVTAETKMSDVIYEMSRKKLGVTTVV 252

Query: 258 DEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +G+KL GII++GD+ R      KD+  L+  + M  +PK I  +   T A+ L+ Q  I
Sbjct: 253 -KGEKLLGIISDGDLRRLLEHRGKDVMDLTAGECMTSSPKTIHPEAYATAALDLMEQRKI 311

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           + L VVD   +  GIVH  DL
Sbjct: 312 TSLAVVDSNGELKGIVHLHDL 332


>gi|117926614|ref|YP_867231.1| KpsF/GutQ family protein [Magnetococcus sp. MC-1]
 gi|117610370|gb|ABK45825.1| KpsF/GutQ family protein [Magnetococcus sp. MC-1]
          Length = 326

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 135/324 (41%), Positives = 193/324 (59%), Gaps = 9/324 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A +++  E   + ++   L G+    F  AV++I A  GRVV+TG+GKSG IG K
Sbjct: 8   DMLARARQTLELEAEAILAMRERLNGD----FVQAVQQILACTGRVVVTGMGKSGIIGHK 63

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TL+STGTP+ ++H  E  HGDLGM+T  D +I LS SG + E+ A+L   +R   PL
Sbjct: 64  IAATLSSTGTPALYLHPGEGIHGDLGMLTAQDCVIALSNSGETAEVLALLPVIKRLGTPL 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAI     S +A  +D+ L      E+CP  LAPT+S    LA+GDALA+ALLE+R FSE
Sbjct: 124 IAILGRMASTLARQSDVALDASVAREACPLNLAPTSSTTAALALGDALAVALLEARGFSE 183

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + F + HPGG LG    +   D+MH G ++P V     + DA+  ++ KR G  AV++E 
Sbjct: 184 DQFALFHPGGALGRKLLLKVEDLMHHGAALPQVARHTLVKDALWEMTAKRLGLTAVLEED 243

Query: 261 QKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +L GIIT+GD+ R       DL  L  E +M  NPK I  D L   A+  +    I+ L
Sbjct: 244 GRLAGIITDGDLRRQLEDHPGDLLNLRAEQIMTVNPKAIQPDALAAQAVHDMETRAITAL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD  Q+ +G++H  DLLR G++
Sbjct: 304 LVVD-AQQLVGVIHLHDLLRAGVV 326


>gi|312879641|ref|ZP_07739441.1| KpsF/GutQ family protein [Aminomonas paucivorans DSM 12260]
 gi|310782932|gb|EFQ23330.1| KpsF/GutQ family protein [Aminomonas paucivorans DSM 12260]
          Length = 339

 Score =  333 bits (853), Expect = 3e-89,   Method: Composition-based stats.
 Identities = 127/332 (38%), Positives = 192/332 (57%), Gaps = 8/332 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           R+   L     +    + +  E   L    S+L   L      A   + A  GRVV++G+
Sbjct: 11  RESAPLTDGELLAVGRKVLEEEANALLRAASTLGDPL----VRAARCVAACSGRVVVSGL 66

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSG IG K+A+TL+S GTP+FF+HAAE SHGDLGM+ R+D+ + LS SG + E+  ++ 
Sbjct: 67  GKSGLIGRKIAATLSSLGTPAFFLHAAEGSHGDLGMVCREDVGLFLSNSGETREVLELVP 126

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + RR   PLIAIT +  S +A  ADIVL    E E+ P GLAPT+S  +QLA+GDALA  
Sbjct: 127 FFRRLGAPLIAITGKEDSSLARVADIVLDSCVEREADPLGLAPTSSTTLQLALGDALAGM 186

Query: 193 LLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           +   +     DF + HPGG LG    +   D+M + D +P V+    + +A+  ++ K +
Sbjct: 187 VTRLQGLVPEDFALFHPGGALGRRLLLRVGDLMGAEDRLPRVRTDATVREALFEITSKGY 246

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G  AV D    L+G+ T+GD+ R   +   +  +L VE VM  NP+ I    L   A++L
Sbjct: 247 GATAVEDPQGFLRGVFTDGDLRRLLERRGPESLSLPVEQVMTPNPRTIEPGRLAVEALRL 306

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++ +SVL+ VD   +A+GI+H  ++L+ G+
Sbjct: 307 MERNEVSVLLAVDPQGRAVGILHLHEVLKAGV 338


>gi|126662149|ref|ZP_01733148.1| sugar phosphate isomerase, KpsF/GutQ family protein [Flavobacteria
           bacterium BAL38]
 gi|126625528|gb|EAZ96217.1| sugar phosphate isomerase, KpsF/GutQ family protein [Flavobacteria
           bacterium BAL38]
          Length = 321

 Score =  333 bits (853), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 127/324 (39%), Positives = 193/324 (59%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A R++++E + + +L + L  +    F  +V +I   KGR+V+TGIGKS  I 
Sbjct: 4   TETILATAKRTLLSESKSIENLVNYLDED----FAKSVTEIYNTKGRLVVTGIGKSALIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTPS F+HAAEA HGDLGM+ ++D+II +S SG+S E+K +    +RF  
Sbjct: 60  QKIVATLNSTGTPSMFLHAAEAVHGDLGMVQQEDIIICISKSGNSPEIKVLAPLLKRFGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI +T++  S +   +  +L    E E+CP+ LAPT S   QL +GDALA+ L+E RNF
Sbjct: 120 TLIGMTADKNSYLGKESHYILHAYVESEACPNNLAPTNSTTAQLVLGDALAVCLMEMRNF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF + HPGG LG   +     M      P+V     +   I  +SEKR G  AV+ E
Sbjct: 180 KSEDFAIYHPGGALGKKLLLRVKDMLDTTHKPMVPPDASIKRVIMEISEKRLGVTAVI-E 238

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI+T+GDI R  +       L+ +D+M KNPK I    L++ A+ +L  ++I+ L
Sbjct: 239 NNQVIGIVTDGDIRRMLNNRDTFADLTAQDIMTKNPKNINSSILVSEALDILENNSITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD+ +   GI+H  D+L+ GI+
Sbjct: 299 VVVDNNEY-KGILHLHDILKEGIV 321


>gi|121606990|ref|YP_984319.1| KpsF/GutQ family protein [Polaromonas naphthalenivorans CJ2]
 gi|120595959|gb|ABM39398.1| KpsF/GutQ family protein [Polaromonas naphthalenivorans CJ2]
          Length = 330

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 136/334 (40%), Positives = 193/334 (57%), Gaps = 7/334 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           ++    ++     +  A ++   E   +  L S +  E    F  AV  + A  GRVV+ 
Sbjct: 1   MSFDAANINAGQALSLARKTFEIEAGAVLDLASRIGDE----FVQAVGLMFACPGRVVVM 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG K+A+TLASTGTP+ FVH AEASHGDLGMI   D+++ +S SG S+EL AI
Sbjct: 57  GMGKSGHIGRKIAATLASTGTPAMFVHPAEASHGDLGMIQAVDVVLAISNSGESEELVAI 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L    R  + LIA+T   +S +A  A + L      E+CP  LAPT+S   QLA+GDAL+
Sbjct: 117 LPVLIRLGVALIAMTGGAQSTLAKQAHVTLDTSVAREACPLNLAPTSSTTAQLAMGDALS 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL++R F E DF   HPGG LG       SDVM SG+++P V       + +  +S K
Sbjct: 177 VALLDARGFREEDFARSHPGGALGRKLLTHVSDVMRSGNAVPQVMPETSFTELMREMSAK 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G  AVVD  Q + GI T+GD+ R   K  DL +L+  DVM   P  +  ++L   A+ 
Sbjct: 237 GLGASAVVDGKQCVLGIFTDGDLRRLVEKGVDLRSLTAADVMHARPHTVRINSLAVEAVA 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L+ Q+ I+ ++VVD+     G ++  DL+R  +I
Sbjct: 297 LMEQYQINSVLVVDEAGALCGALNTNDLMRAKVI 330


>gi|254515272|ref|ZP_05127333.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR5-3]
 gi|219677515|gb|EED33880.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR5-3]
          Length = 325

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 192/323 (59%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A R+I  E + +++LE+ +      +F  A E I  + GR V+TG+GKSGH+G K
Sbjct: 6   RYLHSAQRTIRMEAQAVAALEARI----GEEFETACELILKVPGRTVVTGMGKSGHVGGK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVH  EASHGD+GMIT DD +I LS SG++ E+  ++   +R  +PL
Sbjct: 62  IAATLASTGTPAFFVHPGEASHGDMGMITADDCVIALSNSGTTPEVLMLVPLLKRLGVPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A  +D  +    E E+CP  LAPT+S    L +GDALAIALLE+R F+ 
Sbjct: 122 ISMTGAPGSALAQASDAHINTGVEVEACPLDLAPTSSTTTTLVMGDALAIALLEARGFTA 181

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG    +   DVM  GD+IP V    PL  A+  +S K  G   V   G
Sbjct: 182 EDFAFSHPGGALGRKLLLKIDDVMRQGDAIPRVSENTPLSQALLEISAKGLGMTTVTASG 241

Query: 261 -QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L G+ T+GD+ R      D+ T  + D+M ++P       L   A++++ + +IS L
Sbjct: 242 SGELVGVFTDGDLRRALDGQLDIKTTCIGDIMTRSPATAHSGILAAEALRIMEERHISAL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +V+D+  +  G+V+ L LL  GI
Sbjct: 302 VVLDEQGQTAGVVNLLALLEAGI 324


>gi|255264200|ref|ZP_05343542.1| sugar isomerase, KpsF/GutQ family [Thalassiobium sp. R2A62]
 gi|255106535|gb|EET49209.1| sugar isomerase, KpsF/GutQ family [Thalassiobium sp. R2A62]
          Length = 322

 Score =  332 bits (852), Expect = 4e-89,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 194/324 (59%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            + + +  A R I  E   L++L   L       F  AVE +   KGRV+++G+GKSGHI
Sbjct: 3   DRRTFLATAHRVITDEAAALTTLADGL----GESFADAVELMLNTKGRVIVSGMGKSGHI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTP+ FVH AEASHGDLGM+T+DD+++VLS SG + EL  ++ Y RRF 
Sbjct: 59  ARKIAATLASTGTPAHFVHPAEASHGDLGMMTKDDVVLVLSNSGETPELADLIAYTRRFG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +I +     S +    D+ L LP   E+C  G  PT S  M LA+GDALAIAL+E R+
Sbjct: 119 IQMIGVAKAANSNLMRQTDVALMLPDMGEACGTGTVPTNSTSMTLALGDALAIALMEHRS 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  +F   HPGGKLG       D+MH G ++P +    P+ D + ++S+K FG V V +
Sbjct: 179 FTPENFRDFHPGGKLGARLSKVRDLMHDGAALPTIAFDSPMSDTLLMISQKGFGVVGVTN 238

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L GI+T+GD+ R+    L  ++  +VM K+P  I  D L   A+ ++ +  I+ L 
Sbjct: 239 ADDYLVGIVTDGDLRRHMD-GLLGMTAGEVMTKSPTTIGPDALAEAAVAVMNERKITCLF 297

Query: 319 VVDDCQ--KAIGIVHFLDLLRFGI 340
           VVD     +A+GI+H  D LR GI
Sbjct: 298 VVDPDGSQRAVGILHIHDCLRAGI 321


>gi|195952546|ref|YP_002120836.1| KpsF/GutQ family protein [Hydrogenobaculum sp. Y04AAS1]
 gi|195932158|gb|ACG56858.1| KpsF/GutQ family protein [Hydrogenobaculum sp. Y04AAS1]
          Length = 319

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 134/318 (42%), Positives = 196/318 (61%), Gaps = 7/318 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             AL +I  E   +  L+  +  +    F  A+  I   KG+V++TG+GKSGHI  K+AS
Sbjct: 6   DTALETISKEIEAVEGLKLLINED----FEKAIYVIHRSKGKVILTGVGKSGHIARKIAS 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+AS GTP+ F+H  EA HGDLG+I+++D+++ LS SG S E+  ++ Y +     LI++
Sbjct: 62  TMASVGTPAVFLHPNEALHGDLGIISKEDVVLALSNSGESAEILYMIPYIKMMGCFLISV 121

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A  +DI + L  E E+CP  LAPT+S    L +GDA+A++LL    F E DF
Sbjct: 122 TNNKNSTLAKQSDISIVLNIEKEACPLNLAPTSSTTAMLVLGDAMAMSLLRLSGFKEEDF 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +LHP G LG       DV H GD +P+VK    + +AI  +++K FG  AVVDE  KL 
Sbjct: 182 ALLHPAGFLGKKLKQVKDVGHFGDELPIVKKDAKIYEAIIEITQKGFGATAVVDEAGKLV 241

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T+GDI R      D+NT SV +V  KNPK I +  +L  A+ L+  + I+VL++ ++
Sbjct: 242 GILTDGDIRRILESKVDINTTSVYEVCTKNPKTISKSDILAKALSLMESYKITVLII-EE 300

Query: 323 CQKAIGIVHFLDLLRFGI 340
            +K IGI+H  D+LR GI
Sbjct: 301 DEKPIGIIHLHDILRSGI 318


>gi|327398683|ref|YP_004339552.1| KpsF/GutQ family protein [Hippea maritima DSM 10411]
 gi|327181312|gb|AEA33493.1| KpsF/GutQ family protein [Hippea maritima DSM 10411]
          Length = 322

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 125/325 (38%), Positives = 185/325 (56%), Gaps = 8/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +    R++  E   + SL   +       F  AVE I   +GRV+ +GIGKSG +  
Sbjct: 2   NKVLNAIKRAVDIEANSIISLSKRIDS----SFLEAVELIDGCEGRVIFSGIGKSGLVAK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++ST +S G PS FVH AEA+HGDLGMI +DD+ I+LS SGS+ E+  +L   +RF + 
Sbjct: 58  KISSTFSSIGIPSMFVHPAEAAHGDLGMIRKDDVAILLSNSGSTPEVLFLLPMLKRFGLK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I+I     S +A  +D+VL    E E+    L PT+S    L IGDALA  L+  R+F 
Sbjct: 118 IISIVGNVNSELAKRSDVVLDSSVEQEATSVSLVPTSSTTTALVIGDALAAGLIVKRDFK 177

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF  LHPGG +G    V   D+MHSG  +P+V         I  +S KR G   VV++
Sbjct: 178 EEDFAFLHPGGAIGKKLLVRVEDLMHSGGDVPVVGKDESFEKLIYEISSKRLGMTTVVND 237

Query: 260 GQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +L G+IT+GD+ R   K    L  +  +D+M KNPK I   +L   A  ++  ++I+ 
Sbjct: 238 KGELIGVITDGDLRRAIEKYKDSLFKIKAKDIMNKNPKTIDRFSLAAKAANIMESYSITS 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V++D  +  G++H  D+L+ G++
Sbjct: 298 LVVIEDNGRIEGVIHMHDILKAGVL 322


>gi|259414964|ref|ZP_05738887.1| arabinose 5-phosphate isomerase [Silicibacter sp. TrichCH4B]
 gi|259349415|gb|EEW61162.1| arabinose 5-phosphate isomerase [Silicibacter sp. TrichCH4B]
          Length = 323

 Score =  332 bits (852), Expect = 5e-89,   Method: Composition-based stats.
 Identities = 145/320 (45%), Positives = 207/320 (64%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + T+    R +  E   L+ + +    E+      AVE ++A++GRV+++G+GKSGHIG+
Sbjct: 9   DETLAEMARVLTVEAAALTRMAA----EVGDAQLRAVEILEAMEGRVIVSGVGKSGHIGN 64

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ +V+S SG + EL  I+ Y+RRF+IP
Sbjct: 65  KIAATLASTGTPAQFVHATEASHGDLGMVTPRDVCLVISNSGETSELADIVTYSRRFAIP 124

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT +  S +A  AD+VL LP  PE+C  G+APTTS    LA+GDALA+AL++ R F 
Sbjct: 125 LIAITRKADSTLATQADVVLLLPDAPEACGIGMAPTTSTTATLAMGDALAVALMKRRGFE 184

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGGKLG   +    +MH+G+++PLV    P+ +A+  ++ K FG   +V EG
Sbjct: 185 REDFKVFHPGGKLGAQLMLVDGLMHTGEALPLVAPDTPMSEALLTMTAKGFGLAGLV-EG 243

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ RN    L   S  +V  + PKVI   +L + A+  +    IS L V+
Sbjct: 244 GRLTGIITDGDLRRNMD-GLMARSAGEVATRGPKVIRRGSLASEALHEMNSRKISALFVL 302

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  +  G++H  D LR G+
Sbjct: 303 DDEDRVAGLLHIHDCLRAGL 322


>gi|99077987|ref|YP_611246.1| KpsF/GutQ family protein [Ruegeria sp. TM1040]
 gi|99034930|gb|ABF61984.1| KpsF/GutQ family protein [Ruegeria sp. TM1040]
          Length = 323

 Score =  332 bits (851), Expect = 6e-89,   Method: Composition-based stats.
 Identities = 146/320 (45%), Positives = 208/320 (65%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + T+    R +  E   L+ + S    E+      AVE ++A++GRV+++G+GKSGHIG+
Sbjct: 9   DETLAEMARVLTVEAAALTQMAS----EVGDPQLKAVEILEAMEGRVIVSGVGKSGHIGN 64

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ +V+S SG + EL  I+ Y+RRF+IP
Sbjct: 65  KIAATLASTGTPAQFVHATEASHGDLGMVTPRDVCLVISNSGETSELADIVTYSRRFAIP 124

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT +  S +A  AD+VL LP  PE+C  G+APTTS    LA+GDALA+AL++ R F 
Sbjct: 125 LIAITRKADSTLATQADVVLLLPDAPEACGIGMAPTTSTTATLAMGDALAVALMKRRGFE 184

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF V HPGGKLG   +    +MH+G+++PLV    P+ +A+ I++ K FG   +V EG
Sbjct: 185 REDFKVFHPGGKLGAQLMLVDGLMHTGEALPLVAPETPMTEALLIMTAKGFGLAGLV-EG 243

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ RN    L   S  +V  + PKVI   +L + A+  +    IS L V+
Sbjct: 244 GRLTGIITDGDLRRNMD-GLMARSAGEVATRGPKVIRRGSLASEALHDMNSRKISALFVL 302

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  +  G++H  D LR G+
Sbjct: 303 DNEDRVAGLLHIHDCLRAGL 322


>gi|189499413|ref|YP_001958883.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides BS1]
 gi|189494854|gb|ACE03402.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides BS1]
          Length = 326

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 135/327 (41%), Positives = 202/327 (61%), Gaps = 7/327 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           SL +   +      I+ E   L    S + G L   FH +VE + A +G+ +I+G+GKSG
Sbjct: 4   SLDRQGILATGKSIILKEAASL----SRIAGLLDRNFHASVELLCACRGKAIISGMGKSG 59

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG K+A+TL+STGT + F+H A+A+HGDLG+++ DD++I LS SG ++EL  IL   R+
Sbjct: 60  IIGQKIAATLSSTGTTALFMHPADAAHGDLGVVSEDDVVICLSKSGMTEELNFILPALRK 119

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             + +IA T   +S +A +ADIVL +  E E+CP  LAPTTS    LA+GDALAI L++ 
Sbjct: 120 IGVSIIAFTGNKRSYLAENADIVLDVSVEEEACPFDLAPTTSTTAMLAMGDALAICLMQE 179

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           + F+  DF V HP G LG    +  SD+M +G+++PLV+   PL D I  ++ KRFG   
Sbjct: 180 KQFTHRDFAVTHPKGSLGRRLTMKVSDIMATGEALPLVEETVPLTDLILEMTSKRFGMSG 239

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +VD   KL GI T+GD+ R      D+ +L  +DVM K PK +  DT+    +++L  H 
Sbjct: 240 IVDHSGKLSGIFTDGDLRRIIQCRSDILSLQAKDVMTKGPKTVSADTMAEECLKILESHR 299

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I+ L+V +D  + +G++H  DL+  G+
Sbjct: 300 ITQLLVCEDDNRPVGLIHIHDLISLGL 326


>gi|317050377|ref|YP_004111493.1| KpsF/GutQ family protein [Desulfurispirillum indicum S5]
 gi|316945461|gb|ADU64937.1| KpsF/GutQ family protein [Desulfurispirillum indicum S5]
          Length = 316

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 122/321 (38%), Positives = 174/321 (54%), Gaps = 8/321 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +Q A + I  E   ++ L   L  +    F  +VE I   +GRV++ G+GKSG 
Sbjct: 1   MNHEHFLQSARQVITTEATEVARLVEHLDMD----FARSVEAILQSRGRVIVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T+ASTGTPSFF+H  EA HGDLGM+T DD+ I +S SG +DE+  ++ + +  
Sbjct: 57  IGKKIAATMASTGTPSFFMHPGEAYHGDLGMVTPDDVFIAISHSGETDEVVKLIPFLQDN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LIA+T    S +A  A   L      E+CP  LAPT+S    L +GDALA+ L+E+R
Sbjct: 117 GNYLIALTGNPASTLARAAHSHLNTGVTREACPLQLAPTSSTTATLVLGDALAVTLMEAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           NF   +F   HPGG LG   +   + +   D++P V     + D I  +SE R G   VV
Sbjct: 177 NFQPENFARFHPGGSLGRKLLTRVEQVMKQDNLPFVDSQTGMKDIIHTMSEGRCGLAIVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +    L GIIT+GD+ R   K   D   LS +D+M + PK +   T L  A  L+    I
Sbjct: 237 NAQNFLVGIITDGDLRRAMDKRQEDFFRLSAQDIMTREPKTVAPQTRLVDAEALMISRKI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           + L+V     +  GI+   DL
Sbjct: 297 NSLLVA-QDLRVSGIIQLYDL 316


>gi|171056873|ref|YP_001789222.1| KpsF/GutQ family protein [Leptothrix cholodnii SP-6]
 gi|170774318|gb|ACB32457.1| KpsF/GutQ family protein [Leptothrix cholodnii SP-6]
          Length = 330

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 133/334 (39%), Positives = 190/334 (56%), Gaps = 7/334 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           ++           ++ A +++  E   L  L    Q +    F   V+ + A +GRVV+ 
Sbjct: 1   MSASSSPFDAERAIRMARQTLQIEADALRDL----QPQQGASFAETVQAMLACQGRVVVM 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGH+G K+A+TLASTGTP+ FVH  EASHGDLGM+TR D+++ +S SG SDEL AI
Sbjct: 57  GMGKSGHVGRKIAATLASTGTPAMFVHPGEASHGDLGMVTRGDVVLAISNSGESDELAAI 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +R  + L+A+T   +S +A HAD+VL+     E+CP  LAPT S   QLA+GDALA
Sbjct: 117 LPALKRLGVTLVAMTGRAESTLASHADLVLSNRVTQEACPLNLAPTASTTAQLALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +ALL++R F   DF   HPGG LG        D+M SGD++P V+     +D +  +S K
Sbjct: 177 VALLDARGFRAEDFARSHPGGSLGRKLLTHVRDIMRSGDAVPRVRPDTGFLDVMREMSAK 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G  AVVDE  +  GI T+GD+ R      DL       VM    + + ED L   A  
Sbjct: 237 GLGTTAVVDEDGRAIGIFTDGDLRRAIEAGIDLRERDARGVMHAGARTVREDALAVEAAG 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L+ +  ++ L+V D     +G ++  DL+R  +I
Sbjct: 297 LMEEARVTTLLVSDAQGLLVGAINTNDLMRAKVI 330


>gi|254440435|ref|ZP_05053929.1| sugar isomerase, KpsF/GutQ family [Octadecabacter antarcticus 307]
 gi|198255881|gb|EDY80195.1| sugar isomerase, KpsF/GutQ family [Octadecabacter antarcticus 307]
          Length = 322

 Score =  331 bits (850), Expect = 7e-89,   Method: Composition-based stats.
 Identities = 145/319 (45%), Positives = 204/319 (63%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A R I AE   L +L  ++ G L+     AV+ I   KGR++I+GIGKSGHI  K+A+
Sbjct: 9   ETARRVIRAEADALIALADAIDGSLAD----AVDLILNAKGRIIISGIGKSGHIARKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+ FVH AEASHGDLGM+TR D+++ +S SG + EL  ++ Y +RF+IPLI +
Sbjct: 65  TLASTGTPAHFVHPAEASHGDLGMVTRGDVVLAISNSGEAPELANLIAYTQRFAIPLIGM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +A  +DIVL +PK PE+C  G+ PTTS  M LA+GDAL +A++E R F+ ++F
Sbjct: 125 TSRAESSLASQSDIVLLMPKLPEACGTGVVPTTSTTMTLALGDALCVAIMEHRAFTPDNF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGGKLG       D+MH  D+IPLV    P+ D +  +S+K FG V V+D+   + 
Sbjct: 185 RDFHPGGKLGAQLSRVGDLMHKDDAIPLVGERTPMSDTLLTISQKGFGVVGVLDDNGYIA 244

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T+GD+ RN    L  L+  +VM + P  I   +L   A+ ++ +  I+ L VVD   
Sbjct: 245 GIVTDGDLRRNMA-GLLELTAGEVMTRAPGTIDTASLAEEAVNVMNERKITCLFVVDTKG 303

Query: 325 --KAIGIVHFLDLLRFGII 341
             K  GI+H  D LR GI+
Sbjct: 304 SRKVAGILHIHDCLRAGIV 322


>gi|163756914|ref|ZP_02164022.1| sugar phosphate isomerase, KpsF/GutQ family protein [Kordia
           algicida OT-1]
 gi|161323150|gb|EDP94491.1| sugar phosphate isomerase, KpsF/GutQ family protein [Kordia
           algicida OT-1]
          Length = 322

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 190/324 (58%), Gaps = 7/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+S +  A ++I  E   + +L S +  E    F  AV  I    GRVV+TGIGKS +I 
Sbjct: 4   KDSIISAAKQTIETEYNAIKNLISLIDDE----FAEAVSYIYNSNGRVVVTGIGKSANIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +TL STGTP+ F+HAA+A HGDLG+I   D +I +S SG++ E+K ++   +    
Sbjct: 60  TKIVATLNSTGTPAIFMHAADAIHGDLGIIQEHDTVICISKSGNTPEIKVLVPLIKNSEN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAITS  +S +   AD VL    E E+CP+GLAPTTS   QL +GDALAI LLE R F
Sbjct: 120 KLIAITSNRESFLGTQADYVLHAYVEKEACPNGLAPTTSTTAQLVLGDALAICLLELRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG       + M S +  P V     + D I  +S+   G  AV+++
Sbjct: 180 SSKDFAKYHPGGALGKKLYLRVNDMSSVNQKPKVFADSSVKDVIVEISKGMLGATAVIND 239

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +++ G+IT+GDI R    +  +  L+ +D+M  NPK I  D +   A++++  + IS L
Sbjct: 240 AEEIIGVITDGDIRRMLSNNDFIGNLTAKDIMSSNPKRIENDAMAVEALEVMEDNGISQL 299

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           MV +   K  GIVH  DL++ GI+
Sbjct: 300 MV-EAQGKYAGIVHLHDLVKEGIL 322


>gi|238022464|ref|ZP_04602890.1| hypothetical protein GCWU000324_02372 [Kingella oralis ATCC 51147]
 gi|237867078|gb|EEP68120.1| hypothetical protein GCWU000324_02372 [Kingella oralis ATCC 51147]
          Length = 322

 Score =  331 bits (850), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 136/326 (41%), Positives = 198/326 (60%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +  A  ++ +E   +  + + L  +    F  A E + A +GRV++TG+GKSGHI
Sbjct: 1   MVHQYLLWAREALASEAAAIGEVSAGLGAD----FVRAAEAVLACRGRVIVTGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA+HGDLGMI   D+++ LS SG SDE+ AIL   +R  
Sbjct: 57  GRKMAATLASTGTPAFFVHPAEAAHGDLGMIVDGDVVLALSNSGESDEILAILPALKRKD 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI ++S  +S +A  ADI +      E+CP  LAPT+S    LA+GDALAI LL++R 
Sbjct: 117 TVLIGVSSNAQSSLARFADIHIRAAVSHEACPLNLAPTSSTTAVLALGDALAIVLLQARR 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF + HP G LG    +   D+MHSG  +P V     L  AI  +SEK  G +AVV
Sbjct: 177 FTSEDFALSHPAGSLGRRLLLTVGDLMHSGAELPAVAERTLLKSAIVTMSEKGLGMLAVV 236

Query: 258 DEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    LKG++T+GD+ R F +      L+V DVM + PK I  D L + A++++++  I 
Sbjct: 237 DVSGCLKGVLTDGDLRRLFEQRDSFAGLTVNDVMKREPKFIAPDKLASEALRMMQEKRIG 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V D+    +G ++  DLL+  ++
Sbjct: 297 GLLVCDEGMHLVGALNMHDLLKARVV 322


>gi|162147899|ref|YP_001602360.1| arabinose 5-phosphate isomerase [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|161786476|emb|CAP56058.1| putative arabinose 5-phosphate isomerase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 353

 Score =  331 bits (849), Expect = 8e-89,   Method: Composition-based stats.
 Identities = 151/333 (45%), Positives = 202/333 (60%), Gaps = 13/333 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQ-----------GELSFQFHCAVEKIKAIKGRVVI 69
            S +  A R +  E  GL+ L ++L+             L   F  AV+    + GRV++
Sbjct: 20  QSDITAACRVLARESDGLARLAAALRAPAVSDEPEGITPLGTAFARAVDAFSTLAGRVIV 79

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TGIGKSGH+G K+ STLASTGTPS FVH +EASHGDLGMI R D ++ LS SG + EL  
Sbjct: 80  TGIGKSGHVGRKIQSTLASTGTPSVFVHPSEASHGDLGMIQRGDAVLALSNSGETAELAD 139

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+ +ARR+ + L AIT+   S +A  ADI L +PK PE+CP GLAPTTS  MQ+A+GDAL
Sbjct: 140 IVAHARRYGLLLAAITATPDSTLARAADIALIVPKAPEACPMGLAPTTSTTMQMALGDAL 199

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ LLE RNFS  DF V HPGG+LGT     SD+MH G ++PL      +   I  ++ K
Sbjct: 200 AVVLLERRNFSATDFGVFHPGGRLGTRLRRVSDLMHRGAAMPLGTPDIAMRQVIMEMTRK 259

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            FGC+ VV    +L+G+IT+GD+ R   +DL++    D+M   P     D L   A++L+
Sbjct: 260 AFGCIGVVAPDGRLRGLITDGDLRRALDRDLDSTLAADIMNPTPLTTGPDVLAAEALRLM 319

Query: 310 R--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 I+ L VVD     +GI+H  DLLR G+
Sbjct: 320 NARARPITSLFVVDAAGLPVGILHIHDLLRAGV 352


>gi|294013117|ref|YP_003546577.1| arabinose-5-phosphate isomerase [Sphingobium japonicum UT26S]
 gi|292676447|dbj|BAI97965.1| arabinose-5-phosphate isomerase [Sphingobium japonicum UT26S]
          Length = 335

 Score =  331 bits (849), Expect = 9e-89,   Method: Composition-based stats.
 Identities = 130/318 (40%), Positives = 194/318 (61%), Gaps = 3/318 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           + A R++     GL++LE+     E S  F   V  I  ++GR+++TG+GKSG I  K+ 
Sbjct: 18  ETARRTLSIAAEGLNALENQFSDREFSANFLRLVGVIMNVRGRLIVTGMGKSGIIARKMT 77

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+H A+A HGDLGMIT DD++++LS SG S+EL  I+ Y +RF+IPL+ 
Sbjct: 78  ATLTSTGTPAIFLHPADAGHGDLGMITPDDVVLMLSHSGESNELGPIIQYCKRFAIPLLG 137

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S VA  +DI + +P   E+CP+ LAPTTS  +Q+A GDALAIAL+E R FS +D
Sbjct: 138 MTARPHSTVAASSDICILMPDVKEACPNSLAPTTSTTIQMAFGDALAIALMEMRGFSADD 197

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+  HP G+LG   V   ++M SG  +P V+    L+DA   ++  R G  AVV+   +L
Sbjct: 198 FHKFHPNGRLGAQLVKVRELMASGGDVPRVEEDASLLDATIEMTRARLGGTAVVNGKGEL 257

Query: 264 KGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            G  T+GD+ R      +    V   M   P  +  + L + A++L+  HNI++L V + 
Sbjct: 258 IGAFTDGDLRRTVTGTRHMNEPVGRYMTVQPVSVSPEELASEALRLMHDHNITLLFVCEK 317

Query: 323 CQKAIGIVHFLDLLRFGI 340
             + +G +H  DLL  G+
Sbjct: 318 D-RLVGAIHMHDLLHAGV 334


>gi|209542516|ref|YP_002274745.1| KpsF/GutQ family protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530193|gb|ACI50130.1| KpsF/GutQ family protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 353

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 151/333 (45%), Positives = 202/333 (60%), Gaps = 13/333 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQ-----------GELSFQFHCAVEKIKAIKGRVVI 69
            S +  A R +  E  GL+ L ++L+             L   F  AV+    + GRV++
Sbjct: 20  QSDITAACRVLARESDGLARLAAALRAPAVSDEPEGITPLGTAFARAVDAFSTLAGRVIV 79

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TGIGKSGH+G K+ STLASTGTPS FVH +EASHGDLGMI R D ++ LS SG + EL  
Sbjct: 80  TGIGKSGHVGRKIQSTLASTGTPSVFVHPSEASHGDLGMIQRGDAVLALSNSGETAELAD 139

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+ +ARR+ + L AIT+   S +A  ADI L +PK PE+CP GLAPTTS  MQ+A+GDAL
Sbjct: 140 IVAHARRYGLLLAAITAAPDSTLARAADIALIVPKAPEACPMGLAPTTSTTMQMALGDAL 199

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ LLE RNFS  DF V HPGG+LGT     SD+MH G ++PL      +   I  ++ K
Sbjct: 200 AVVLLERRNFSATDFGVFHPGGRLGTRLRRVSDLMHRGAAMPLGTPDIAMRQVIMEMTRK 259

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            FGC+ VV    +L+G+IT+GD+ R   +DL++    D+M   P     D L   A++L+
Sbjct: 260 AFGCIGVVSPDGRLRGLITDGDLRRALDRDLDSTLAADIMNPTPLTTGPDVLAAEALRLM 319

Query: 310 R--QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 I+ L VVD     +GI+H  DLLR G+
Sbjct: 320 NARARPITSLFVVDAAGLPVGILHIHDLLRAGV 352


>gi|325103762|ref|YP_004273416.1| KpsF/GutQ family protein [Pedobacter saltans DSM 12145]
 gi|324972610|gb|ADY51594.1| KpsF/GutQ family protein [Pedobacter saltans DSM 12145]
          Length = 322

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 130/324 (40%), Positives = 194/324 (59%), Gaps = 7/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  A  +++ E R +  L   L  +    F   VE I  +KGRV++TGIGKS  IG
Sbjct: 4   REEILSSAKNTLLTESRAIEQLVDYLNAD----FADLVETIFKLKGRVIVTGIGKSAIIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTP+ F+HA EA HGDLG+I RDDL++ +S SG++ E+K ++   ++ + 
Sbjct: 60  QKIVATLNSTGTPAIFMHAGEAIHGDLGIIQRDDLVLCISKSGNTPEIKVLIPLLKQGNN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+ +I  +  S +A  +D ++    E E+CP  LAPTTS   QL IGDALAI LLE R F
Sbjct: 120 PIASIVGDTNSYLAKQSDFIINATIEAEACPLNLAPTTSTTAQLVIGDALAICLLELRRF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF   HPGG LG         + S +  P ++    +   I  +++KR G  AVV E
Sbjct: 180 TSRDFAKFHPGGALGKRLYLKVRDLSSQNEKPQIEPEDDIRKVILEITKKRLGITAVV-E 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++KG+IT+GD+ R   K    + LS +D+M  NPK I  D L   A+++++++NI+ +
Sbjct: 239 QNEVKGVITDGDLRRMMEKFTYFDKLSAKDIMSSNPKTIQGDELAVNALKIMKENNITQI 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD  +K  GI+H  DLL+ GII
Sbjct: 299 VVVDKLEKYQGIIHLHDLLKEGII 322


>gi|124515316|gb|EAY56826.1| Sugar isomerase, KpsF/GutQ family [Leptospirillum rubarum]
          Length = 332

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 129/332 (38%), Positives = 194/332 (58%), Gaps = 14/332 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+N  ++ A   +  E R LS+L  SL       F  AV  I    G+V +TG+GKSGH+
Sbjct: 6   MENR-IRKAREVLDEESRALSALSHSL----DEAFSRAVAAILQGSGKVAVTGMGKSGHV 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+T +STGTP+FF+H  EA HGDLG + R D ++ LS SG + E+  +L   +R  
Sbjct: 61  ARKIAATFSSTGTPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRID 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI+I  E +S +A  +++ L +P   E+ P G+APTTS    LA+GDALA+ LLE R 
Sbjct: 121 IPLISIVCERESTLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEERA 180

Query: 199 FSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF  LHPGG LG  +    SD+MH+G+++P+V  G  L + I  ++ K+ G  A+ 
Sbjct: 181 FDVGDFARLHPGGMLGRRYYLKVSDLMHTGNALPVVASGTALREVIMEMTAKKLGIAAIT 240

Query: 258 DEGQKLKGIITEGDIFRNFHKD--------LNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           D G ++ GI+T+GD+ R   +              V+  M ++P  + +D L + A+ L+
Sbjct: 241 DPGNRVLGILTDGDLRRILERRTFDSVRGTFLDDPVDGFMTRSPVSVSKDLLASEAVALM 300

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               +S L+VVD+  +  GI+HF D LR  ++
Sbjct: 301 EHRKVSQLLVVDEEGQLEGILHFHDCLRAKVV 332


>gi|118602206|ref|YP_903421.1| KpsF/GutQ family protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567145|gb|ABL01950.1| KpsF/GutQ family protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
          Length = 327

 Score =  331 bits (849), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 126/326 (38%), Positives = 194/326 (59%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A + I+ E + +  L   L       F  A + I+   G+VV+ G+GKSGHI
Sbjct: 6   MSNSLLQSAKKVILTEAQAVMMLADGLDQ----SFIDACQLIQNCTGKVVLIGMGKSGHI 61

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+T ASTGTP+F VH  EA HGDLGMIT++D++I +S+SG SDE+  ++   +R  
Sbjct: 62  AGKIAATFASTGTPAFAVHPGEAGHGDLGMITQEDVVIAISYSGESDEIMTLIPIIKRLG 121

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +I +T    S +   +++ L +  E E+CPH LAPT+S  + L +GD LAI+LL ++ 
Sbjct: 122 ILIIGMTKNVNSSIGRISNVHLDVSVEKEACPHNLAPTSSTTVALVMGDTLAISLLINKG 181

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG   +   S +M  GD IP+V     L+DA+ I+S+K  G V + 
Sbjct: 182 FSVDDFARSHPSGTLGRRLLTLVSTIMKIGDDIPIVSADTKLLDALLIMSQKTLGMVLIT 241

Query: 258 DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +    LKGI T+GD+ R      ++ +L++  VM  N + I +D     A+Q++ + N++
Sbjct: 242 NNNNILKGIFTDGDLRRVLETYPNIQSLTISKVMTPNCQSISKDRPAMAAVQMMDEFNLN 301

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD  + +G ++   L++  II
Sbjct: 302 SLPVVDDNNQVVGAINTHTLMQAKII 327


>gi|88704069|ref|ZP_01101784.1| arabinose 5-phosphate isomerase [Congregibacter litoralis KT71]
 gi|88701896|gb|EAQ99000.1| arabinose 5-phosphate isomerase [Congregibacter litoralis KT71]
          Length = 325

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 132/319 (41%), Positives = 192/319 (60%), Gaps = 8/319 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R+I  E   +++LE+ +      +F  A E I  + GR V+TG+GKSGH+G K+A+T
Sbjct: 10  SAQRTIRMEVEAVAALEARV----GEEFERACELILKVPGRTVVTGMGKSGHVGGKIAAT 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+FFVH  EASHGD+GMIT DD +I LS SG++ E+  ++   +R  IPLI++T
Sbjct: 66  LASTGTPAFFVHPGEASHGDMGMITADDCVIALSNSGTTPEVLMLIPLLKRLGIPLISMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  +D  +      E+CP  LAPT+S    L +GDALAIALLE+R F+  DF 
Sbjct: 126 GAPDSALAKASDAHINTGVAVEACPLDLAPTSSTTTALVMGDALAIALLEARGFTAEDFA 185

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKL 263
             HPGG LG    +   DVM  G+ IP V    PL DA+  +S K  G   VV  +  +L
Sbjct: 186 FSHPGGALGRKLLLKIDDVMRQGEGIPKVSEATPLSDALLEISAKGLGMTTVVAADSDRL 245

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G+ T+GD+ R   +  D+    + D+M ++P  +    L   A++++ + +IS L+V+D
Sbjct: 246 LGVFTDGDLRRALDEQVDIKGTRIGDIMTRSPATVHTGMLAAEALRIMEERHISALVVLD 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           + Q+  G+V+ L LL  GI
Sbjct: 306 EQQEIAGVVNLLALLEAGI 324


>gi|218961057|ref|YP_001740832.1| carbohydrate isomerase, KpsF/GutQ family [Candidatus Cloacamonas
           acidaminovorans]
 gi|167729714|emb|CAO80626.1| carbohydrate isomerase, KpsF/GutQ family [Candidatus Cloacamonas
           acidaminovorans]
          Length = 322

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 122/324 (37%), Positives = 190/324 (58%), Gaps = 7/324 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +  +     +  E   +  +   L  E       A + +   KG+VV+TG+GK+G I  K
Sbjct: 2   NIYETVQEELAKEATAIQKVAKQLSKE---SLEKAFDLLCKCKGKVVLTGMGKTGIIARK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +++TLASTGT S F+HAAE  HGDLGMI   D++I +S SG++ EL  ++ + +   +P+
Sbjct: 59  ISATLASTGTTSIFLHAAEGIHGDLGMIESGDVVIAVSNSGNTQELINLIPFLKFNYVPI 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT E  S +A ++D+VL      E  P GL PT S  + LA+GDALAIALL+ +NF  
Sbjct: 119 IAITGEPNSQLAKNSDVVLNCHIPKELEPLGLVPTASTTVALAVGDALAIALLKHKNFQL 178

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            D    HPGG +G    +  SD+MHSG  +P+++    + +AI  ++ K+ GC AV ++ 
Sbjct: 179 KDLAKFHPGGTIGKKLLLRVSDLMHSGKELPVIEEKAKMSEAIMEMTSKKLGCTAVTNKD 238

Query: 261 QKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            KL G+IT+GD+ R  H   N+L   + +D M  NPK +  + L   A+ L+  + I+++
Sbjct: 239 GKLTGMITDGDLRRQLHNKGNSLLSYTAKDCMTANPKTLKPEVLAVEALNLMETYKITMI 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
            VVD+    +G++H  DL+  G+I
Sbjct: 299 PVVDENNVPVGMLHMHDLITAGVI 322


>gi|312144456|ref|YP_003995902.1| KpsF/GutQ family protein [Halanaerobium sp. 'sapolanicus']
 gi|311905107|gb|ADQ15548.1| KpsF/GutQ family protein [Halanaerobium sp. 'sapolanicus']
          Length = 330

 Score =  331 bits (848), Expect = 1e-88,   Method: Composition-based stats.
 Identities = 128/334 (38%), Positives = 190/334 (56%), Gaps = 9/334 (2%)

Query: 11  VTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           + ++  S  K +S +  A   +  E   +  +  +L G     F  A++ I    GRVV 
Sbjct: 1   MNKEDISKEKLSSAMDEAKNVLEIEAEAVLKIRDNLDG----SFKEAMKIIIDCPGRVVF 56

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           TG+GK+G +  K+A+T +STGT +FFVHA E  HGDLGMI   D++I +S SG SDE+ +
Sbjct: 57  TGVGKAGLVAKKMAATFSSTGTSAFFVHAGEGLHGDLGMIKNGDVVIAVSNSGESDEVIS 116

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L   RR  + LIA+T +N S +A +AD++L      E+CP  LAPT S    +A+GDAL
Sbjct: 117 LLPSLRRIGVKLIALTGDNDSTLATYADLILETDVITEACPLNLAPTASTTAAIALGDAL 176

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           AIAL     F++ DF + HPGG LG   +    DV+      P+VK    +  A+  +++
Sbjct: 177 AIALSTYYGFTQEDFALYHPGGSLGKKLLTKVKDVVEIRKQNPIVKTETSVRQALFKMTK 236

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
            R G  +VVD+   LKGIIT+GDI R   K  D     V+D M  +P  I +D L   A+
Sbjct: 237 TRMGSTSVVDQAGNLKGIITDGDIRRLLEKSADFIDRPVKDYMTVDPVTITKDKLAAEAL 296

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           Q++ +  I+ L VV +  K + +++F DLLR  +
Sbjct: 297 QIMEEKEINDLPVV-EAGKPVAMLNFQDLLRAKV 329


>gi|222055368|ref|YP_002537730.1| KpsF/GutQ family protein [Geobacter sp. FRC-32]
 gi|221564657|gb|ACM20629.1| KpsF/GutQ family protein [Geobacter sp. FRC-32]
          Length = 321

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 135/323 (41%), Positives = 194/323 (60%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A      E   L +L   + G+    F  AV  I + +GRVV+TG+GKSG IG K
Sbjct: 2   SILEAAKNVFRIEAEALLALAEGVNGD----FEKAVRLILSSRGRVVVTGMGKSGLIGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +ASTLASTGTP+FF+H AE  HGDLGMI + D++I +S SG ++E+  IL   +R    +
Sbjct: 58  IASTLASTGTPAFFLHPAEGIHGDLGMIIKGDVVIAISNSGETEEVVRILPIIKRLGADI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T    S +A   D+ L +  + E+CP GLAPT S    LA+GDALA+ALL  R F  
Sbjct: 118 VAMTGNPSSTLAKSGDVFLDISVKEEACPLGLAPTASTTATLAMGDALAVALLLERGFKA 177

Query: 202 NDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG   +    D+MH G+ +PLVK+G  + +A+ +++ K  G   VVDE 
Sbjct: 178 EDFALFHPGGALGKKLILKVEDIMHQGNEVPLVKVGTLMREALFVITSKGLGITGVVDET 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             + G+IT+GD+ R   K  D+  L V+D+M  +PK I    +   A+Q + Q +I+ L 
Sbjct: 238 GAMAGVITDGDLRRALEKGLDIINLPVDDLMSMSPKRIRRTEMAAKALQQMEQFSITSLF 297

Query: 319 VVDDCQ-KAIGIVHFLDLLRFGI 340
           V +D     +GI+H  DLL+ GI
Sbjct: 298 VFEDRGSIPVGIIHLHDLLKSGI 320


>gi|317487197|ref|ZP_07945997.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
 gi|316921536|gb|EFV42822.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
          Length = 325

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 129/319 (40%), Positives = 198/319 (62%), Gaps = 6/319 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S V  A  ++  +   L  +      +L   F   +  + +I GR+ +TG+GKSGH+  K
Sbjct: 12  SFVPFAGDTLKKQAESLWHMA----EDLDDSFDEVIRCLLSISGRIAVTGMGKSGHVARK 67

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTG+P++F+H AEASHGDLGM++R D +I  S SG + EL  I+ +A R  +P+
Sbjct: 68  VAATLASTGSPAYFIHPAEASHGDLGMVSRHDAVIAFSNSGETAELSDIILFASRHGVPI 127

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +T    S +A HAD VL LP EPE+CP G APTTS  +Q+A+GDA+A++LL++R F  
Sbjct: 128 TGVTKRGDSFLARHADHVLLLPNEPEACPIGCAPTTSTTLQMALGDAIALSLLKARGFGA 187

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF+  HPGG+LG   +   ++MH G+++PL  +  P+ + + I++ K FGCV ++ E  
Sbjct: 188 EDFHRFHPGGRLGRKLMTVREIMHVGEALPLASLDSPMTEILCIMTGKGFGCVGIM-EKG 246

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L GIIT+GD+ R+    L  L+ E VM +NP  + E  L   A+ +++   I+ L VV 
Sbjct: 247 ILVGIITDGDLRRHMDGGLLGLTAERVMSRNPITVDEHCLAAKALGIMQSSKITSLYVV- 305

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              + +GI++  D LR G+
Sbjct: 306 RSGEPVGILNVHDCLRAGV 324


>gi|152993936|ref|YP_001359657.1| arabinose-5-phosphate isomerase [Sulfurovum sp. NBC37-1]
 gi|151425797|dbj|BAF73300.1| arabinose-5-phosphate isomerase [Sulfurovum sp. NBC37-1]
          Length = 322

 Score =  330 bits (847), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 118/322 (36%), Positives = 188/322 (58%), Gaps = 7/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A  +   E   L ++   L       F  A+E I + KG++++TG+GKSG +G+K
Sbjct: 2   DLIQIAQETFQTEAEALLTMTERLDQ----NFLDAIETIFSTKGKLIVTGVGKSGLVGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGT SFF+H  EA HGDLGMI +DD ++ +S SG S+EL  IL + +RF I L
Sbjct: 58  MAATFASTGTSSFFLHPTEALHGDLGMIGKDDTLLAISSSGESEELTKILPHIKRFEIQL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T    S +A +AD+ + +  E E+CP  +APTTS  + +A+GDALA+AL+  R F +
Sbjct: 118 IGLTGNADSTLARYADVWIDISVEKEACPLNVAPTTSTTLTMALGDALAVALMHKRGFRK 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG         +   +++P++K   PL +A+  +SE + G V VVDE  
Sbjct: 178 EDFASFHPGGSLGKRLFVKIKDLMRTENLPVIKENTPLKEAVVAMSEGKLGTVLVVDEND 237

Query: 262 KLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
               ++++GD+ R   ++  ++     D   ++PK     + L + A++++    I +L 
Sbjct: 238 AFTALLSDGDLRRALMREDFSMEQPAIDYATQHPKSYSNTELLASEALEIIENERIQLLP 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           + D+  K IG++H  DL+  GI
Sbjct: 298 ITDEAGKIIGVLHIHDLVNAGI 319


>gi|254488502|ref|ZP_05101707.1| arabinose 5-phosphate isomerase [Roseobacter sp. GAI101]
 gi|214045371|gb|EEB86009.1| arabinose 5-phosphate isomerase [Roseobacter sp. GAI101]
          Length = 309

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 144/312 (46%), Positives = 198/312 (63%), Gaps = 7/312 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  E   L +L  SL       F  A++ + A +GRV++TGIGKSGHI  K+A+TLASTG
Sbjct: 2   IRTEADALVALADSLDDR----FRQAIDLLIATRGRVIVTGIGKSGHIAKKIAATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGMIT DD+++ +S SG + EL  ++ Y+RRFSIPLI ITS   S
Sbjct: 58  TPAQFVHPAEASHGDLGMITGDDVVLAISNSGEAPELANLIAYSRRFSIPLIGITSREAS 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +    D+VL LP+ PE+C  G+ P+TS  M LA+GDA+AIAL+E+R+F+   F   HPG
Sbjct: 118 SLGAQCDVVLLLPQLPEACGTGVVPSTSTTMTLAMGDAVAIALMENRSFTAEHFREFHPG 177

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG      +D+MH+GD++PLV++  P+ +A+  +S K FG V V D    L+GIIT G
Sbjct: 178 GKLGARLSRVADLMHTGDALPLVQVDAPMSEALMAMSSKSFGVVIVTDAAGTLQGIITSG 237

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIG 328
           D+ R+    L + +  DVM   P  I  D L   A+ ++    I+ L+VV  D      G
Sbjct: 238 DLGRHLD-GLLSKTARDVMTATPVSIAPDALAEKAVGIMNARKITCLLVVEPDGANIPEG 296

Query: 329 IVHFLDLLRFGI 340
           ++H  D LR G+
Sbjct: 297 LLHIHDCLRVGL 308


>gi|85703488|ref|ZP_01034592.1| Sugar phosphate Isomerase [Roseovarius sp. 217]
 gi|85672416|gb|EAQ27273.1| Sugar phosphate Isomerase [Roseovarius sp. 217]
          Length = 327

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 138/331 (41%), Positives = 207/331 (62%), Gaps = 6/331 (1%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S  +        +  + A   I  E   L+++ ++L  +    F   V ++  ++GRV++
Sbjct: 2   STAKTHTEAHSETPSEIARDVIRIEAEALTAMGAALPSD----FDAVVARLLEVRGRVIV 57

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           +G+GKSGHI +K+A+T+ASTGTP+ +VH  EASHGDLGMITR+D +I++S SG + EL  
Sbjct: 58  SGMGKSGHIAAKIAATMASTGTPAQYVHPGEASHGDLGMITREDAVILMSNSGETRELAD 117

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+ + RRF+IPLIAIT + +S +   AD +LTLP  PE+C  G+APTTS    LA+GDAL
Sbjct: 118 IIAHCRRFAIPLIAITKKAESTLGQQADFLLTLPNAPEACAIGMAPTTSTTCTLALGDAL 177

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+A++  R F   +F   HPGG LG   +  S VMH GD++P+V+   P+ + +  ++ K
Sbjct: 178 AVAMMRLRGFERENFLAFHPGGTLGAQLLRVSSVMHRGDALPVVRESTPMGETLLEMTAK 237

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            FG  AVV E  +L  +IT+GD+ RN   DL   +  +V  +NP+ IL D LL+ A+ ++
Sbjct: 238 GFGVAAVV-EDGRLLAVITDGDLRRNLS-DLMARTAGEVATRNPRSILPDALLSEALGVM 295

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + IS L  VD+  +  G+VH  D LR G+
Sbjct: 296 NTNKISALFAVDESGQLCGLVHIHDALRAGV 326


>gi|315499285|ref|YP_004088089.1| kpsf/gutq family protein [Asticcacaulis excentricus CB 48]
 gi|315417297|gb|ADU13938.1| KpsF/GutQ family protein [Asticcacaulis excentricus CB 48]
          Length = 332

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 147/314 (46%), Positives = 206/314 (65%), Gaps = 4/314 (1%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTL 86
           ++  E  GL ++  +L GEL  +F  A+  I   +   GR+++TG+GKSGHIG K+A++L
Sbjct: 19  TVEIETAGLQAMRDALDGELGKRFEGAISTILDAQSKGGRIIVTGMGKSGHIGRKIAASL 78

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTG  S FVH AEASHGDLGM+  DD+++ LSWSG + EL  I+ Y RRFS+PLIAITS
Sbjct: 79  ASTGALSHFVHPAEASHGDLGMVGGDDVVLALSWSGEAPELADIIAYTRRFSVPLIAITS 138

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             KS +   ADI L LPK  E+CP+GLAPTTS  MQLA+GD + +ALL  R F+  DF  
Sbjct: 139 GPKSALGSAADIALVLPKMAEACPNGLAPTTSTTMQLAMGDCITVALLSLRKFTAQDFRQ 198

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGGKLG+  +   D+MHSGD++PLV     L +AI  +S KR+G   +VD G +L GI
Sbjct: 199 FHPGGKLGSRLLKVGDLMHSGDAMPLVSDRSLLSEAIVEISSKRYGMTGIVDAGGRLIGI 258

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T+GD+ R F +  N   V ++M + P+V   DTL +  +  +   +I+ L  V+   K 
Sbjct: 259 VTDGDLRRAFSEGFNDRPVSEIMTRAPRVTTPDTLASQLLAEMNARSITGLFAVEKE-KP 317

Query: 327 IGIVHFLDLLRFGI 340
           +G++H  ++LR G+
Sbjct: 318 VGVIHLHEILRAGV 331


>gi|170717636|ref|YP_001784716.1| KpsF/GutQ family protein [Haemophilus somnus 2336]
 gi|168825765|gb|ACA31136.1| KpsF/GutQ family protein [Haemophilus somnus 2336]
          Length = 311

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 128/314 (40%), Positives = 185/314 (58%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  S+ AE+  L+ L  +L      QF+  VE I   +GR+V+ GIGKSG IG K
Sbjct: 2   NYLQIARNSLAAEQNALAKLSQNLNQ----QFNQVVELILNCEGRLVVGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HAD +L +  E E+CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IALTGNLNSTLAKHADYILDISVEREACPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             V         +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCRVKDQMQVRLPK-VTENTNFTGCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            LKGIIT+GDI R    +         +D+M  NPK I  +T L+ A   +++  I  L+
Sbjct: 236 NLKGIITDGDIRRALSANGTNTLNKIAKDLMTSNPKTINYNTYLSEAENFMKEKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VVDD  K IG+V F
Sbjct: 296 VVDDQNKVIGLVEF 309


>gi|189425230|ref|YP_001952407.1| KpsF/GutQ family protein [Geobacter lovleyi SZ]
 gi|189421489|gb|ACD95887.1| KpsF/GutQ family protein [Geobacter lovleyi SZ]
          Length = 322

 Score =  330 bits (846), Expect = 2e-88,   Method: Composition-based stats.
 Identities = 134/324 (41%), Positives = 194/324 (59%), Gaps = 9/324 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A + I    +  ++  ++L G L   F  AV+ I A  GRVV++G+GKSG +G K
Sbjct: 2   SILDEARKVI----QAEAAAVAALAGRLDSSFEKAVQMILASSGRVVVSGMGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +AST+ASTGTP+FF+H AE  HGDLGMI   D++I +S SG ++EL  IL   +R    L
Sbjct: 58  IASTMASTGTPAFFLHPAEGIHGDLGMIMTGDVVIGISNSGETEELLRILPVIKRLGANL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA++    S +A  +D+ L +    E+CP GLAPT+S    LA+GDALA+ALL  R F  
Sbjct: 118 IAMSGNPASNLARSSDVFLDVSVAEEACPLGLAPTSSTTATLAMGDALAVALLVERGFKA 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG    +   D+MH GDSIPLV+    + +A+ +++ K  G   V D  
Sbjct: 178 EDFAIFHPGGALGKKLLLRVEDLMHGGDSIPLVQEEMLMKEALFVITSKGLGITGVTDAQ 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL G+IT+GD+ R   +  D+   +   +M +NPK IL   L   A+QL+ +H+I+ L 
Sbjct: 238 GKLTGVITDGDLRRCLERGEDILHSTAGSLMHRNPKRILRRELAAAALQLMERHSITTLF 297

Query: 319 VVDDC--QKAIGIVHFLDLLRFGI 340
             +D   Q   G++H  D+L+ GI
Sbjct: 298 AFEDEQSQAPCGVIHLHDILKAGI 321


>gi|121596413|ref|YP_988309.1| KpsF/GutQ family protein [Acidovorax sp. JS42]
 gi|120608493|gb|ABM44233.1| KpsF/GutQ family protein [Acidovorax sp. JS42]
          Length = 333

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 138/337 (40%), Positives = 190/337 (56%), Gaps = 7/337 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
                    S      ++    ++  E   L ++   L G     F   V+++ A  GRV
Sbjct: 1   MPVAPAASSSFNAEQALRLGRETVRTEAEALHAMGERLGG----GFVQVVQRVLATTGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL++ LS SG S E+
Sbjct: 57  VVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTNGDLVLALSNSGESSEI 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +L   +R  +PLIA+T   +S +A HAD+VL    + E+CP  LAPTTS   QLA+GD
Sbjct: 117 TVLLPVLKRLGVPLIAMTGGLQSTLARHADLVLDCSVQREACPLNLAPTTSTTAQLAMGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALA+ALL++R F   DF   HPGG LG        DVM +G  +P V         +  +
Sbjct: 177 ALAVALLDARGFRPEDFARSHPGGALGRKLLTHVRDVMRAGADVPHVPPHANFSTLMREM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           S K  G  AVVD+  +  GI T+GD+ R      DL     +DVM  +P+ I  D L   
Sbjct: 237 SAKGVGATAVVDDAGRPVGIFTDGDLRRRIEAGLDLRETRAQDVMHASPRTIAADALAAD 296

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A Q +  H+I+ ++V DD    +G+VH  DL+R  +I
Sbjct: 297 AAQAMEHHSITSVLVTDDDGVLVGVVHIGDLMRAKVI 333


>gi|157827303|ref|YP_001496367.1| KpsF [Rickettsia bellii OSU 85-389]
 gi|157802607|gb|ABV79330.1| KpsF [Rickettsia bellii OSU 85-389]
          Length = 319

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+    A R I +E   L  L   +  +    F+  VE + + KGRVV+TGIGKSG+I  
Sbjct: 5   NNYENVAKRVISSEASALKKLSEHIPED----FNRIVEFLLSFKGRVVLTGIGKSGYIAK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A++ +STG P+F++H AEASHGDLGMIT+DDL+I+LS SG + EL  I+ Y + FS+ 
Sbjct: 61  KIAASFSSTGMPAFYIHPAEASHGDLGMITKDDLVIMLSNSGETKELFNIIKYCKDFSVK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + A+T    S +A ++D +L +P+  E+   G APT S+++ L++GDAL   + E + F+
Sbjct: 121 IAAMTMNKNSTLAANSDFLLIVPEYSEASIIG-APTVSSLIMLSLGDALMTVIHEVKGFT 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ++DF   HPGG +G        +M SGD IPLV    P  + I ++++KR GC  V+D+ 
Sbjct: 180 KDDFKSYHPGGSIGANLTEIKHLMRSGDQIPLVHEDTPFAETILVMNKKRLGCTLVIDKA 239

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L G+IT+GD+ R+ +  ++  +  D+M KNP  I  +      + L++  NI+ L +V
Sbjct: 240 KNLVGVITDGDLRRHINDQIHLKTASDIMTKNPVYISSEIFAKEVLDLMKAKNITNLPIV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+    IGI H  DLLR G+
Sbjct: 300 DN-NTIIGITHIHDLLRAGV 318


>gi|315635455|ref|ZP_07890721.1| arabinose 5-phosphate isomerase [Arcobacter butzleri JV22]
 gi|315480213|gb|EFU70880.1| arabinose 5-phosphate isomerase [Arcobacter butzleri JV22]
          Length = 320

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 123/319 (38%), Positives = 199/319 (62%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     ++ E + L    + +    SF    A++ I   KG++++TG+GKSG +G+K+A+
Sbjct: 5   EIVRDVLLTEAKELEKTANKI----SFDIEKAIDLIVNSKGKLIVTGVGKSGLVGAKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFF+H  EA HGDLGMI +DD+++ +S+SG S+EL  IL + +R +IPLIA+
Sbjct: 61  TLASTGTSSFFLHPTEAMHGDLGMIGKDDIVLGISYSGESEELIQILPHLKRLNIPLIAM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +A +AD+ + +  + E+CP   APT+S  + +A+GDALA+ L++ R+F + DF
Sbjct: 121 AKSENSTLAKYADVFINIAVDKEACPLDTAPTSSTTLTMAMGDALAVCLMKKRDFKKEDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG       D +   D++P V     L DAI ++SE R G V +VDE + + 
Sbjct: 181 ASFHPGGSLGKKLFVKVDDLLKKDNLPTVSRETKLKDAIIVMSEGRLGNVIIVDENRTVF 240

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
           G++++GD+ R    +  ++  +VED+   NPK +  +D L + A+Q++  + I +L+V D
Sbjct: 241 GVLSDGDLRRALMNENFSINCNVEDIATLNPKTLKNKDLLASDALQIIENYKIQLLIVTD 300

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  K IG++H  DL+  GI
Sbjct: 301 ENNKLIGLLHIHDLIEAGI 319


>gi|116747458|ref|YP_844145.1| KpsF/GutQ family protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696522|gb|ABK15710.1| KpsF/GutQ family protein [Syntrophobacter fumaroxidans MPOB]
          Length = 357

 Score =  329 bits (845), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 182/320 (56%), Gaps = 7/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   +  E  G+  L   +    S  F  AV  I    GR+++TGIGKSG +G K+
Sbjct: 36  ILEIAADVLRIESEGILHLLDHI----SESFARAVLWIYEAGGRIIVTGIGKSGIVGRKI 91

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +TL+STGTP+ F+H  EA HGDLGM+   D+++ LS SG +DEL  IL   +     +I
Sbjct: 92  VATLSSTGTPALFIHPVEAMHGDLGMVRAGDIVLALSNSGETDELNIILPSLKNIGTRII 151

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A T +  S +A ++D+ +      E+CP GL PT S    LA+GDALA+ALL  RNF E 
Sbjct: 152 AFTGDTSSTLAQYSDLTVYTGVPREACPMGLVPTASTTAMLAMGDALAVALLRLRNFQER 211

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF+  HPGG LG  L V   DVM  GD IP V    P+  A+  +S K  G   ++DE +
Sbjct: 212 DFHRFHPGGHLGERLQVPLRDVMLKGDEIPAVPAATPVPAALAEMSRKGLGATLILDEDK 271

Query: 262 KLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L+GI T+GD+ R  +   +     + +VM   P+ I     +  A++L+ +H I+VL V
Sbjct: 272 RLQGIFTDGDLRRTLNSCSNFTEKRISEVMTPGPRTISSHRSVADALELMERHLITVLPV 331

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           VD+ +   GI+H  DLL  G
Sbjct: 332 VDENRNVEGILHLHDLLGKG 351


>gi|89890376|ref|ZP_01201886.1| sugar phosphate isomerase, KpsF/GutQ family, involved in capsule
           expression [Flavobacteria bacterium BBFL7]
 gi|89517291|gb|EAS19948.1| sugar phosphate isomerase, KpsF/GutQ family, involved in capsule
           expression [Flavobacteria bacterium BBFL7]
          Length = 321

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 136/324 (41%), Positives = 196/324 (60%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N+ ++ A R+I  E   + +LE+SL       F  AV  I   +GRV+ITGIGKS  I 
Sbjct: 4   ENNILEVAKRTIRIESAAVKNLENSLDS----AFAKAVNHIHTAQGRVIITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T+ STGTP+ F+HAA+A HGDLG+I ++D++I +S SG++ E+K ++   + F  
Sbjct: 60  MKIVATMNSTGTPAIFMHAADAIHGDLGIIQKNDVVICISKSGNTPEIKVLVPLIKNFEN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAITS   S +   AD VL  P E E+CP+GLAPTTS   QL +GDALAI LLE + F
Sbjct: 120 KLIAITSHQDSFLGKEADFVLHAPIEEEACPNGLAPTTSTTAQLVVGDALAICLLELKGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++ DF   HPGG LG         +   ++ P V     L D I  +SE R G   VVDE
Sbjct: 180 TDKDFARYHPGGALGKKLYLRVQELIDQNAKPQVTSNSTLRDVIVNISENRLGMTVVVDE 239

Query: 260 GQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GIIT+GD+ R     K++++L+  D+M  +PK I  D +   A +++ ++N+S L
Sbjct: 240 T-KLIGIITDGDLRRMLSTGKNIDSLTAADIMTTSPKTIDADDMAVQAREVMEEYNVSQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           + V+      G+VH  DL+R GI+
Sbjct: 299 VAVNKDGY-AGVVHIHDLIREGIL 321


>gi|58040277|ref|YP_192241.1| capsule expression protein [Gluconobacter oxydans 621H]
 gi|58002691|gb|AAW61585.1| Capsule expression protein [Gluconobacter oxydans 621H]
          Length = 332

 Score =  329 bits (844), Expect = 3e-88,   Method: Composition-based stats.
 Identities = 151/321 (47%), Positives = 206/321 (64%), Gaps = 2/321 (0%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  AL+++  E+ GL +LE +L G L   F  AV +I   +GR+++TGIGKSGHI  K
Sbjct: 11  TALDSALQTVSIEREGLQALEHALSGPLGEAFCEAVNRIAESEGRLIVTGIGKSGHIARK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TLASTGTPS F+H AEA+HGDLGM+   DLI+  S SG S EL AIL YA R +  +
Sbjct: 71  VQATLASTGTPSLFLHPAEAAHGDLGMVAPGDLILAFSNSGESTELAAILAYAARQNHCV 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAITS   S +A  ++I L LP   E+CP GLAPTTS ++QLA+GDALA+ALLE R F+ 
Sbjct: 131 IAITSVGTSALARASEIPLVLPSSTEACPMGLAPTTSTLLQLALGDALALALLEKRGFTA 190

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG      SD+MH+GD++PL +   PL   I  ++ K FGC+ V D+  
Sbjct: 191 RDFGAFHPGGLLGARLRPISDLMHTGDALPLGQGSLPLRSVILEMTRKSFGCMGVTDDNG 250

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMV 319
            L+G+IT+ D+ R    DL+T + +DVM   P      TL    +QL+   +  I+ L +
Sbjct: 251 VLQGLITDADLRRALSGDLDTTTAKDVMNAAPVTATPTTLAQDVLQLMNQRERPITSLFI 310

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD+ ++  GIVH  DLLR G+
Sbjct: 311 VDEDRRPTGIVHVHDLLRSGL 331


>gi|91205589|ref|YP_537944.1| KpsF [Rickettsia bellii RML369-C]
 gi|91069133|gb|ABE04855.1| KpsF [Rickettsia bellii RML369-C]
          Length = 319

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 6/320 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+    A R I +E   L  L   +  +    F+  VE + + KGRVV+TGIGKSG+I  
Sbjct: 5   NNYENVAKRVISSEASALKKLSEHIPED----FNRIVEFLLSFKGRVVLTGIGKSGYIAK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A++ +STG P+F++H AEASHGDLGMIT+DDL+I+LS SG + EL  I+ Y + FS+ 
Sbjct: 61  KIAASFSSTGMPAFYIHPAEASHGDLGMITKDDLVIMLSNSGETKELFNIIKYCKDFSVK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + A+T    S +A ++D +L +P+  E+   G APT S+++ L++GDAL   + E + F+
Sbjct: 121 IAAMTMNKNSTLAANSDFLLIVPEYSEASIIG-APTVSSLIMLSLGDALMTVIHEVKGFT 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ++DF   HPGG +G        +M SGD IPLV    P  + I ++++KR GC  V+D+ 
Sbjct: 180 KDDFKSYHPGGSIGANLTEIKHLMRSGDQIPLVHEDTPFAETIIVMNKKRLGCTLVIDKA 239

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + L G+IT+GD+ R+ +  ++  +  D+M KNP  I  +      + L++  NI+ L +V
Sbjct: 240 KNLVGVITDGDLRRHINDQIHLKTASDIMTKNPVYISSEIFAKEVLDLMKAKNITNLPIV 299

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+    IGI H  DLLR G+
Sbjct: 300 DN-NTIIGITHIHDLLRAGV 318


>gi|120603622|ref|YP_968022.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
 gi|120563851|gb|ABM29595.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
          Length = 339

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 122/317 (38%), Positives = 192/317 (60%), Gaps = 6/317 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E   L+ L   L       F  AV+ +  I GR+ +TG+GKSGH+G K+A
Sbjct: 28  INFAASVLQQEAHALTLLARGLDT----SFCDAVDCLYGISGRIAVTGMGKSGHVGRKVA 83

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P++F+H +EASHGDLGM+  +D ++  S SG++ EL  I+ Y+ R  IPLI 
Sbjct: 84  ATLASTGSPAYFIHPSEASHGDLGMLVSNDAVLAFSNSGNTAELSDIILYSARRGIPLIG 143

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T  + S++  H+  +L LP  PE+ P G APTTS  +Q+A+GDALA+ L+  R  S  +
Sbjct: 144 VTRNSDSLLGKHSTHLLLLPLVPEADPLGCAPTTSTTLQMALGDALALTLMCHRGCSPEE 203

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+  HPGG LG   +   ++MHSG  +PL+    P+ + + +++ K FG   ++ E  +L
Sbjct: 204 FHRWHPGGSLGRKLLTVKEIMHSGAEVPLISSSTPMPEVLCLMTGKGFGVAGIL-EKDRL 262

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT+GD+ R+    L   +   VM  +P V+ E TL   A++L++++ I+ L V    
Sbjct: 263 VGIITDGDLRRHMGITLMDKTARQVMHPDPVVVDEGTLAVAALRLMQKNQITSLFVTRK- 321

Query: 324 QKAIGIVHFLDLLRFGI 340
            + +GI++  D LR G+
Sbjct: 322 GEPVGILNVHDCLRAGV 338


>gi|88803235|ref|ZP_01118761.1| KpsF/GutQ [Polaribacter irgensii 23-P]
 gi|88780801|gb|EAR11980.1| KpsF/GutQ [Polaribacter irgensii 23-P]
          Length = 322

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 187/323 (57%), Gaps = 7/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S +Q A  +I+ E   ++ L S L       F  AV  I    GRV++TGIGKS +I 
Sbjct: 4   SSSILQTAKETILLESVAIAHLASLL----DENFENAVNFILNSNGRVIVTGIGKSANIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +T  STGTP+ F+HAA+A HGDLG +  +D++I LS SG++ E+K ++   + +  
Sbjct: 60  TKIVATFNSTGTPAIFMHAADAIHGDLGNVQENDVVICLSKSGNTPEIKVLVPLIKNYGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IAIT    S +  +AD  L    E E+C + LAPT+S   QL +GDALA+ L + R F
Sbjct: 120 KIIAITGNIHSFLGKNADFPLNTFVEKEACSNNLAPTSSTTAQLVMGDALAVCLQDLRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG         +   + +P V++   + + I  +SEKR G  AV+ +
Sbjct: 180 SSKDFAKYHPGGALGKKLYLRVSDLTKNNQVPQVQLESSIAEVIVEISEKRLGVTAVL-K 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L GIIT+GDI R   K  ++  ++ +D+M  NPK I ++ +   A++ L   +I+ +
Sbjct: 239 NTELVGIITDGDIRRMLSKTSEIKNITAQDIMGTNPKTISQNAMAIEALEKLESDSITQI 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VVD     IG+VH  DL++ GI
Sbjct: 299 LVVDANHTYIGVVHLHDLIKEGI 321


>gi|33591889|ref|NP_879533.1| hypothetical protein BP0701 [Bordetella pertussis Tohama I]
 gi|33598530|ref|NP_886173.1| hypothetical protein BPP4028 [Bordetella parapertussis 12822]
 gi|33603475|ref|NP_891035.1| hypothetical protein BB4501 [Bordetella bronchiseptica RB50]
 gi|33571533|emb|CAE41011.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33574659|emb|CAE39311.1| conserved hypothetical protein [Bordetella parapertussis]
 gi|33577599|emb|CAE34864.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381306|gb|AEE66153.1| hypothetical protein BPTD_0707 [Bordetella pertussis CS]
          Length = 329

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 189/325 (58%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A R++  E + ++ L + L       F   V  + A +GRVV++GIGK+GHI 
Sbjct: 9   PEAILASARRTLQTEAQAIADLAARL----DDSFVQVVGMLLACRGRVVVSGIGKTGHIA 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+TLASTGTP+FFVHAAEA HGDLGM+TRDD++I +S+SG+  EL  IL   RR   
Sbjct: 65  RKLAATLASTGTPAFFVHAAEAIHGDLGMVTRDDVLIAISYSGTGQELLTILPVVRRMGA 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F
Sbjct: 125 GLIAITGNAESELARLADVHLDASVSQEACPLNLAPTASTTAALALGDALAVACLEARGF 184

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG        DVM  G ++P+V    PL  A+  +S K  G  AVVD
Sbjct: 185 GREDFARSHPGGALGRRLLTHVRDVMRHGPALPIVAEDAPLPRALEEISAKGMGMTAVVD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +K  GI T+GD+ R   +  D+ +L+V D M + P+ I  D L   A Q +    ++ 
Sbjct: 245 AQRKPVGIFTDGDLRRLIERVGDIRSLTVADGMTRAPRTIGPDALAAEAAQQMDDRRLNQ 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++VVD     IG +H  DL+   ++
Sbjct: 305 MLVVDTAGVLIGALHTHDLMAAKVV 329


>gi|206601617|gb|EDZ38100.1| Sugar isomerase, KpsF/GutQ family [Leptospirillum sp. Group II
           '5-way CG']
          Length = 332

 Score =  329 bits (844), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 129/330 (39%), Positives = 193/330 (58%), Gaps = 13/330 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S ++ A   +  E R LS+L  S    +   F  AV  I    G+V +TG+GKSGH+  
Sbjct: 7   ESRIRKAREVLDEESRALSALSLS----MDEAFSRAVAAILQGSGKVAVTGMGKSGHVAR 62

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTP+FF+H  EA HGDLG + R D ++ LS SG + E+  +L   +R  IP
Sbjct: 63  KIAATLSSTGTPAFFLHPGEAVHGDLGALDRGDTVLALSKSGETQEILDLLPLLKRIDIP 122

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++  E +S +A  +++ L +P   E+ P G+APTTS    LA+GDALA+ LLE R F 
Sbjct: 123 LISMVCERESTLARLSEVTLLIPVTREAGPLGIAPTTSTTSMLALGDALAMVLLEERAFD 182

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF  LHPGG LG  +    SD+MH+G ++P+V  G  L + I  ++ K+ G  AV D 
Sbjct: 183 VGDFARLHPGGMLGRRYYLKVSDLMHTGTALPVVASGTALREVIMEMTAKKLGIAAVTDP 242

Query: 260 GQKLKGIITEGDIFRNFHKD--------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           G ++ GI+T+GD+ R   +              V+ VM ++P  + +D L + A+ L+  
Sbjct: 243 GHRVLGILTDGDLRRILERRTFDSAGGTFLDDPVDGVMTRSPVSVRKDLLASEAVALMEH 302

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +S L+VVD+  +  GI+HF D LR  ++
Sbjct: 303 RKVSQLLVVDEGGQLEGILHFHDCLRAKVV 332


>gi|56476147|ref|YP_157736.1| hypothetical protein ebA1315 [Aromatoleum aromaticum EbN1]
 gi|56312190|emb|CAI06835.1| conserved hypothetical protein,KpsF/GutQ family [Aromatoleum
           aromaticum EbN1]
          Length = 376

 Score =  329 bits (843), Expect = 4e-88,   Method: Composition-based stats.
 Identities = 132/326 (40%), Positives = 183/326 (56%), Gaps = 7/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            +   V  A R +  E        ++L   L   F  AV+ I   +GRV++TGIGKSGHI
Sbjct: 55  DETRCVALARRVLHIEAAA----VAALAERLGADFERAVQLILQRRGRVIVTGIGKSGHI 110

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             KLA+TLASTGTP++FVHAAEA+HGDLGMIT +D++I LS SG+S+EL  I+   +R  
Sbjct: 111 ARKLAATLASTGTPAYFVHAAEAAHGDLGMITAEDVVIALSNSGASEELLTIVPLVKRQG 170

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI++T +  S +A  AD+ L      E+CP  LAPT S    LA+GDALA+ALL++R 
Sbjct: 171 AKLISMTGKPDSPLAREADVHLDAAVSEEACPLNLAPTASTTAALALGDALAVALLDARG 230

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F  +DF   HPGG LG       SDVM   D +P V    P+  A+  ++    G  AVV
Sbjct: 231 FGADDFARSHPGGSLGRRLLTHVSDVMRGADRVPQVPETVPMTSALLEMTRGGMGMTAVV 290

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D      GI T+GD+ R   +  +  +    +VM + P+ I  D L   A +++ +  IS
Sbjct: 291 DARGAPIGIFTDGDLRRALERGCDARTAALAEVMTRAPRSIDPDALAVEAAEIMERLRIS 350

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVD      G +   DL+   +I
Sbjct: 351 QLLVVDADGTLAGALTTHDLMLAKVI 376


>gi|311109292|ref|YP_003982145.1| arabinose 5-phosphate isomerase [Achromobacter xylosoxidans A8]
 gi|310763981|gb|ADP19430.1| arabinose 5-phosphate isomerase [Achromobacter xylosoxidans A8]
          Length = 329

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 136/325 (41%), Positives = 193/325 (59%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A R++  E +GL  L + L       F   V  + A +GRVV++GIGK+GH+ 
Sbjct: 9   SETALASARRTLQIECQGLMDLSARL----DDSFTQTVAMLLACRGRVVVSGIGKTGHVA 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+FFVHAAEA HGDLGMIT+DD++I +S+SGS  EL  IL  ARR   
Sbjct: 65  RKIAATLASTGTPAFFVHAAEAVHGDLGMITQDDVLIAISYSGSGQELLTILPVARRMGA 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F
Sbjct: 125 KLIAITGNPQSELARLADVHLDASVAQEACPLNLAPTASTTAALALGDALAVACLEARGF 184

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG        DVM  GD++P+V+ G P+  A+ ++S K  G   V D
Sbjct: 185 GPQDFARSHPGGALGRRLLTHVRDVMRQGDALPIVQAGTPVSQALEVMSAKGMGMTVVTD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +  GI T+GD+ R   +  D+ +L+VE  M ++P+ I  D L   A Q + +  ++ 
Sbjct: 245 AQHRPVGIFTDGDLRRLIARQGDIRSLTVESGMTRSPRSITPDALAVEAAQQMDKQRLNH 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++V+D     +G +H  DL+   ++
Sbjct: 305 MLVLDSDGVLLGALHMHDLMAAKVV 329


>gi|217969308|ref|YP_002354542.1| KpsF/GutQ family protein [Thauera sp. MZ1T]
 gi|217506635|gb|ACK53646.1| KpsF/GutQ family protein [Thauera sp. MZ1T]
          Length = 329

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 135/325 (41%), Positives = 188/325 (57%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++  V  A R +  E   +++L + +      +F  AVE I A  GRV++TG+GKSGHIG
Sbjct: 9   ESRAVALARRVLRIEADAVAALGARI----GEEFERAVEIILARHGRVIVTGVGKSGHIG 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+TLASTGTP++FVHAAEA+HGDLGMIT +D++I LS SGSS+EL  I+   +R   
Sbjct: 65  RKLAATLASTGTPAYFVHAAEAAHGDLGMITPEDVVIALSNSGSSEELLTIVPLVKRQGA 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T +  S +A  AD  L      E+CP  LAPT S    LA+GDAL++ALL++R F
Sbjct: 125 RLIAMTGKPDSPLAREADAHLDAGVAEEACPLNLAPTASTTAALALGDALSVALLDARGF 184

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG        DVM    ++P V    PL  A+  ++    G  AVVD
Sbjct: 185 AAEDFARSHPGGALGRRLLTHVGDVMRPAPAVPRVGSDAPLTQALLAMTAGGMGMTAVVD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +   GI T+GD+ R   K  D+ +  V +VM ++P+ I    L   A   +    IS 
Sbjct: 245 ADEVPVGIFTDGDLRRALEKGCDVRSARVSEVMTRSPRSIAPGALAAEAAATMENMRISQ 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+DD  +  G +   DL+   +I
Sbjct: 305 LLVLDDAGRLAGALTTHDLMLAKVI 329


>gi|209694098|ref|YP_002262026.1| arabinose 5-phosphate isomerase [Aliivibrio salmonicida LFI1238]
 gi|208008049|emb|CAQ78188.1| arabinose 5-phosphate isomerase [Aliivibrio salmonicida LFI1238]
          Length = 324

 Score =  329 bits (843), Expect = 5e-88,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 195/320 (60%), Gaps = 7/320 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E   L+ L + +  +    F  A + +   K +VVI G+GKSGHIG K+A+
Sbjct: 9   KAGKNVLQIEIDALTQLNNYINDD----FTKACQLMLECKRKVVIMGMGKSGHIGKKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFFVH  EASHGDLGMI + D+I+ +S SG + E+ A+L   +R  I LI +
Sbjct: 65  TLASTGTPSFFVHPGEASHGDLGMIEKGDVILAISNSGEAAEILALLPVIKRQGITLITM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS++ S +A  AD+ L +    E+CP  LAPT+S    L +GDALA+ALLE+R F+ +DF
Sbjct: 125 TSKSSSSMANVADVNLLITVPQEACPLALAPTSSTTATLVMGDALAMALLEARGFTSDDF 184

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+ D +P+V     +  A+  +SEK  G  A+VDE QK+
Sbjct: 185 ALSHPGGALGRKLLLHLADIMHTDDELPMVTSDALIKTALLEVSEKGLGMTAIVDEDQKV 244

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R      D++T ++ +VM   P V   + L    + L++   I+ L++ D
Sbjct: 245 IGIFTDGDLRRLLDNRIDIHTQTIGEVMAHTPSVASPNLLAVEGLNLMQDKKINGLLLCD 304

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + +G ++  DLL+ G++
Sbjct: 305 ENNRLVGALNMHDLLKAGVM 324


>gi|89067363|ref|ZP_01154876.1| Sugar phosphate Isomerase [Oceanicola granulosus HTCC2516]
 gi|89046932|gb|EAR52986.1| Sugar phosphate Isomerase [Oceanicola granulosus HTCC2516]
          Length = 322

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 139/314 (44%), Positives = 193/314 (61%), Gaps = 7/314 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +  E   LS L  SL   L+     A+E + A +GRVV++G+GKSGHI  K+A+TLAST
Sbjct: 14  VVATEAEALSILAESLGPGLAE----ALELVLAARGRVVVSGMGKSGHIARKVAATLAST 69

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTP+ FVH AEASHGDLGM+TR D+++VLS SG + EL  ++ Y RRF IPLI + +   
Sbjct: 70  GTPAQFVHPAEASHGDLGMLTRGDVVLVLSNSGETTELADLIAYTRRFGIPLIGVAARAA 129

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +   AD+ L LP+  E+C  G+ PTTS  M LA+GDA+A+AL+E R F+   F   HP
Sbjct: 130 STLMRQADVRLVLPEAREACGTGVVPTTSTTMMLALGDAIAVALMEHRRFTPEMFRDFHP 189

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG+LG      SD+MHSGD++PL     P+ DA+  +S+K FG + V      L GI+T+
Sbjct: 190 GGRLGARLSKVSDLMHSGDALPLAGQATPMSDALLTISQKGFGVLGVTGANGHLAGIVTD 249

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAI 327
           GD+ R+    L   S  DVM   P+ I    L   A++++    I+ L VVD     + +
Sbjct: 250 GDLRRHMD-GLLERSAGDVMTPEPRTIGPGALAEEAVRVMNAQQITCLFVVDPPGSGRVV 308

Query: 328 GIVHFLDLLRFGII 341
           G++H  D LR GI+
Sbjct: 309 GLIHIHDCLRAGIV 322


>gi|148549116|ref|YP_001269218.1| KpsF/GutQ family protein [Pseudomonas putida F1]
 gi|148513174|gb|ABQ80034.1| KpsF/GutQ family protein [Pseudomonas putida F1]
          Length = 310

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 128/316 (40%), Positives = 182/316 (57%), Gaps = 10/316 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++IA+ + ++ L   L GE    F  AVE I   +GR V+ G+GKSG IG K
Sbjct: 2   NHLSIAKEALIAQAQAVTQLADRLDGE----FQSAVELILGCQGRTVVCGMGKSGLIGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG ++EL  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPAEAFHGDLGMLKPIDVLILISYSGETEELIKLIPSLKSFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T   KS +A HADI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F  
Sbjct: 118 IAMTGNGKSTLAKHADIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVMHS    P+V       D + +++  R G   V+D  
Sbjct: 178 MDFARYHPGGSLGRKLLTRVCDVMHS--PAPVVSPSTSFHDCLLVMTRSRLGMTVVMDND 235

Query: 261 QKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI+T+GD+ R   +D +    SVE  M  +P  I ED+ L+ A   +  + I  L 
Sbjct: 236 -KLVGIVTDGDLRRALLEDESVIQASVEQFMTASPHTIREDSQLSEAEAYMLDNKIRALA 294

Query: 319 VVDDCQKAIGIVHFLD 334
           V D     +G+V   D
Sbjct: 295 VTDGDGLVVGVVEIFD 310


>gi|222112651|ref|YP_002554915.1| kpsf/gutq family protein [Acidovorax ebreus TPSY]
 gi|221732095|gb|ACM34915.1| KpsF/GutQ family protein [Acidovorax ebreus TPSY]
          Length = 333

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 138/337 (40%), Positives = 190/337 (56%), Gaps = 7/337 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
                    S      ++    ++  E   L ++   L G     F   V+++ A  GRV
Sbjct: 1   MPVAPAASSSFNAEQALRLGRETVRTEAEALHAMGERLGG----GFVQVVQRVLATTGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+ G+GKSGH+G K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL++ LS SG S E+
Sbjct: 57  VVMGMGKSGHVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTNGDLVLALSNSGESSEI 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +L   +R  +PLIA+T   +S +A HAD+VL    + E+CP  LAPTTS   QLA+GD
Sbjct: 117 TVLLPVLKRLGVPLIAMTGGLQSTLARHADLVLDCSVQREACPLNLAPTTSTTAQLAMGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALA+ALL++R F   DF   HPGG LG        DVM +G  +P V         +  +
Sbjct: 177 ALAVALLDARGFCPEDFARSHPGGALGRKLLTHVRDVMRAGADVPHVPPHANFSTLMREM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           S K  G  AVVD+  +  GI T+GD+ R      DL     +DVM  +P+ I  D L   
Sbjct: 237 SAKGVGATAVVDDAGRPVGIFTDGDLRRRIEAGVDLRETRAQDVMHASPRTIAADALAAD 296

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A Q +  H+I+ ++V DD    +G+VH  DL+R  +I
Sbjct: 297 AAQAMEHHSITSVLVTDDDGVLVGVVHIGDLMRAKVI 333


>gi|93006318|ref|YP_580755.1| KpsF/GutQ family protein [Psychrobacter cryohalolentis K5]
 gi|92393996|gb|ABE75271.1| KpsF/GutQ family protein [Psychrobacter cryohalolentis K5]
          Length = 330

 Score =  328 bits (842), Expect = 6e-88,   Method: Composition-based stats.
 Identities = 129/333 (38%), Positives = 202/333 (60%), Gaps = 7/333 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +     +L     +  A+ +I  EK  L+ L   +       F  A + I A +GRVV+T
Sbjct: 1   MNSPERNLTHEQFISTAIDAINTEKAALALLTEQIDDR----FAQACDIILACQGRVVVT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+ + D+++ +S SG SDE+K +
Sbjct: 57  GMGKSGLIGRKIAATFASTGTPSFFMHPGEAGHGDLGMLVKGDVLLAISNSGESDEIKML 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   +  +IPLI+I+ + + ++   ADI+LTL K  E+CP  LAPT+S    LA+GDALA
Sbjct: 117 LPVVKHLNIPLISISRDKRGMLPHAADIILTLGKSQEACPLNLAPTSSTTATLALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSG-DSIPLVKIGCPLIDAITILSE 248
           +AL+ +RNF+  DF + HP G LG        D+MH+  + +PL+    PL +A+ I+S 
Sbjct: 177 VALVHARNFTSEDFALSHPAGALGRQLLTRVEDLMHTKTEDLPLINQQAPLQEALFIMSA 236

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQ 307
            R G   V D  +K+ GI T+GD+ R   K ++    + ++M+ +P+ I +    + A+ 
Sbjct: 237 GRLGMTVVTDAEKKVVGIFTDGDLRRGLEKGIDLQTPMRELMVSSPRRISKSMRASDALS 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ ++ IS L+++DD Q+   I+   DLL+ G+
Sbjct: 297 VMNENAISQLLIIDDDQRLEAIITVHDLLQAGV 329


>gi|239947699|ref|ZP_04699452.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
           scapularis]
 gi|239921975|gb|EER21999.1| arabinose 5-phosphate isomerase [Rickettsia endosymbiont of Ixodes
           scapularis]
          Length = 319

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 127/321 (39%), Positives = 196/321 (61%), Gaps = 6/321 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + + KGRV++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSEASALEKLSENIPED----FNRIIEFLLSFKGRVILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI
Sbjct: 60  KKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M SGD IPLV       + I ++++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKVKNLMRSGDEIPLVYEDTSFAETIIVMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            Q L GIIT+GD+ R+ +  +       +M KNP  I  +     A+ L++  NI+ + +
Sbjct: 239 NQNLVGIITDGDLRRHINDQIYLKIASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPI 298

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD+    IGI+H  DLLR G+
Sbjct: 299 VDN-NVIIGIIHIHDLLRIGV 318


>gi|254295534|ref|YP_003061556.1| KpsF/GutQ family protein [Hirschia baltica ATCC 49814]
 gi|254044065|gb|ACT60859.1| KpsF/GutQ family protein [Hirschia baltica ATCC 49814]
          Length = 324

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 145/324 (44%), Positives = 209/324 (64%), Gaps = 5/324 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGE----LSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
             +  A   I  E +GL +L  +L  +    +S  F  A++ ++ ++GR++++G+GKSGH
Sbjct: 2   DYLASARDVINCEIKGLEALVQALNVDSSAVISEAFPRAIKLMQNVEGRIIVSGMGKSGH 61

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+A+TLASTG PS FVH  EASHGDLGMI++ D+++ +S SG + EL  I+ Y RRF
Sbjct: 62  IANKIAATLASTGAPSSFVHPGEASHGDLGMISQKDIVLAISNSGETKELADIIAYTRRF 121

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLIAITS   S +A   D +L LP   E+C    APTTS  M LAIGDALA+ LL  +
Sbjct: 122 KIPLIAITSGANSSLAKACDCLLLLPPAAEACGQTRAPTTSTTMTLAIGDALAVTLLTEK 181

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F E DF V HPGGKLG  F   SD++    ++PLV+ G    DA+ I+S+  FGCV V+
Sbjct: 182 GFGETDFKVYHPGGKLGAAFRRVSDLVRDHANLPLVQSGSIAGDAVPIISQGGFGCVGVI 241

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +    L+G+IT+GD+ R+F K+ +T+ V+D+M K+P  I  D L   A++L+  + I+ L
Sbjct: 242 NSAGDLEGMITDGDLRRHFGKNFSTVIVDDIMTKSPLTITNDMLAARALELISSNRITAL 301

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
            V+ + +K IGI+H  D L  G+I
Sbjct: 302 FVL-EDKKPIGILHVHDCLSDGVI 324


>gi|309972929|gb|ADO96130.1| Arabinose-5-phosphate isomerase [Haemophilus influenzae R2846]
          Length = 337

 Score =  328 bits (842), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 129/335 (38%), Positives = 190/335 (56%), Gaps = 11/335 (3%)

Query: 3   FYFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +F  F  +T    +L+  K + ++ A  S+  E   L  L   L       F+  V+ I
Sbjct: 7   VFFYDFAKITPISTALLGRKMNYLKIAQNSLSVESNALLQLSQRL----GEDFNQVVDLI 62

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A KGR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+
Sbjct: 63  LACKGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISY 122

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA+
Sbjct: 123 SGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSAL 182

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           + LA+GDALA++L+ +RNF   DF   HPGG LG   +C             +       
Sbjct: 183 VTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           D +T+++E R G   V+ E ++LKGIIT+GDI R    +       + +D M  +PK I 
Sbjct: 242 DCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIH 300

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 301 QDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|157736322|ref|YP_001489005.1| carbohydrate isomerase KpsF/GutQ family protein [Arcobacter
           butzleri RM4018]
 gi|157698176|gb|ABV66336.1| carbohydrate isomerase, KpsF/GutQ family [Arcobacter butzleri
           RM4018]
          Length = 320

 Score =  328 bits (841), Expect = 7e-88,   Method: Composition-based stats.
 Identities = 122/319 (38%), Positives = 199/319 (62%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     ++ E + L    + +    SF    A++ I   KG++++TG+GKSG +G+K+A+
Sbjct: 5   EIVRDVLLTEAKELEKTANKI----SFDIEKAIDLIVNSKGKLIVTGVGKSGLVGAKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFF+H  EA HGDLGMI +DD+++ +S+SG S+EL  IL + +R +IPLIA+
Sbjct: 61  TLASTGTSSFFLHPTEAMHGDLGMIGKDDIVLGISYSGESEELIQILPHLKRLNIPLIAM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +A +AD+ + +  + E+CP   APT+S  + +A+GDALA+ L++ R+F + DF
Sbjct: 121 AKSENSTLAKYADVFINIAVDKEACPLDTAPTSSTTLTMAMGDALAVCLMKKRDFKKEDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG       D +   D++P V     L DAI ++SE R G V ++DE + + 
Sbjct: 181 ASFHPGGSLGKKLFVKVDDLLKKDNLPTVSRETKLKDAIIVMSEGRLGNVIIIDENRTVF 240

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
           G++++GD+ R    +  ++  +VED+   NPK +  +D L + A+Q++  + I +L+V D
Sbjct: 241 GVLSDGDLRRALMNENFSINCNVEDIATLNPKTLKNKDLLASDALQIIENYKIQLLIVTD 300

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  K IG++H  DL+  GI
Sbjct: 301 ENNKLIGLLHIHDLIEAGI 319


>gi|310816310|ref|YP_003964274.1| KpsF/GutQ family protein [Ketogulonicigenium vulgare Y25]
 gi|308755045|gb|ADO42974.1| KpsF/GutQ family protein [Ketogulonicigenium vulgare Y25]
          Length = 324

 Score =  328 bits (841), Expect = 8e-88,   Method: Composition-based stats.
 Identities = 136/322 (42%), Positives = 195/322 (60%), Gaps = 5/322 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  S +      +  E   L +L  ++  +    F  AV+ I  +KGRV+++G+GKSGH+
Sbjct: 7   MNASYIATGQHVLRLEGEALLTLAEAMPDD----FSAAVDLILGLKGRVIVSGMGKSGHV 62

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL I++S SG + EL  ++ +  RF 
Sbjct: 63  GRKIAATLASTGTPAFFVHPAEASHGDLGMVTAQDLCIMISNSGETSELSDLIAHCVRFG 122

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+I I+ +  S +   A + LT P  PE+C  GLAPTTS  + L +GDALAI+L+E+R 
Sbjct: 123 VPIIGISKQPDSTLMRAATLRLTFPDLPEACSIGLAPTTSTTLSLGLGDALAISLMEARA 182

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   +F   HPGGKLG     A+ +MH+GD +PLV+   P+ + I  ++   FG   VVD
Sbjct: 183 FQPENFRTYHPGGKLGARLATAAQLMHAGDEVPLVREDTPMAEVILSMTSHGFGVAGVVD 242

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               L G+I++GD+ R+    +   ++ DV  KNP  I  D L    +  + Q+ IS + 
Sbjct: 243 AQGALCGVISDGDLRRHMSTLMAQRAI-DVATKNPIAIGADKLAVDILATMNQYKISAIF 301

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V+D  Q  IGIVH  D LR G+
Sbjct: 302 VIDSAQAPIGIVHLHDCLRAGV 323


>gi|149913656|ref|ZP_01902189.1| KpsF/GutQ family protein [Roseobacter sp. AzwK-3b]
 gi|149812776|gb|EDM72605.1| KpsF/GutQ family protein [Roseobacter sp. AzwK-3b]
          Length = 319

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 133/316 (42%), Positives = 194/316 (61%), Gaps = 6/316 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A   +  E+  L +L  +L  +    F   VE +  + GRV+++G+GKSGH+ +K+A+
Sbjct: 9   DIARDVLTIERDALGTLLDALPHD----FDAVVELLLTVPGRVIVSGMGKSGHVAAKIAA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTG+P+ +VH  EASHGDLGMIT  D +I++S SG + EL  I+ + RRFSIPLI I
Sbjct: 65  TMASTGSPAQYVHPGEASHGDLGMITAQDAVILISNSGETRELADIIAHTRRFSIPLIGI 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +   +D +L LP+ PE+C  G+APTTS  + +A+GDALA+AL+  R F   +F
Sbjct: 125 TKRADSTLGTQSDHLLALPEAPEACAIGMAPTTSTTLTMALGDALAVALMRLRGFERANF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +  S VMHSG  +P+V    P+ D +  ++ K FG  A+V E  +L 
Sbjct: 185 LAFHPGGTLGAQLLKVSSVMHSGADLPVVHADTPMGDTLLEMTAKGFGVAALV-EEGRLI 243

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT+GD+ RN   DL   +  +V  + P+ I  D LL+ A+ ++  + IS L  VDD  
Sbjct: 244 GVITDGDLRRNLA-DLMERTAGEVATRGPRTISPDALLSEALGVMNANKISALFAVDDAG 302

Query: 325 KAIGIVHFLDLLRFGI 340
           +  G+VH  D LR G+
Sbjct: 303 RLRGLVHIHDALRAGV 318


>gi|15602390|ref|NP_245462.1| KpsF [Pasteurella multocida subsp. multocida str. Pm70]
 gi|12720786|gb|AAK02609.1| KpsF [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 346

 Score =  328 bits (841), Expect = 9e-88,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 187/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  ++  E++ L+ L   L       F+  VE I   +GR+VI GIGKSG +G K
Sbjct: 37  NYLQIARETLAVEEQALARLGQRLDT----HFNEIVELILQCQGRLVIGGIGKSGLVGKK 92

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 93  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 152

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A H+D VL +  E E CP+ LAPTTS ++ +A+GDALA+AL+++R+F  
Sbjct: 153 IALTGNPNSTLAKHSDYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVALIKARDFKP 212

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+ ++     D ++I++E R G   V+ E  
Sbjct: 213 ADFARFHPGGSLGRRLLCRVKDEMQTR-LPVTRLETSFTDCLSIMNEGRMGVALVM-EQN 270

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D+M  NPK I +D  L  A   +++  I  L+
Sbjct: 271 QLKGIITDGDIRRALTANGAETLRKTAQDLMTSNPKTIHQDAYLAEAEAFMKEKKIHSLV 330

Query: 319 VVDDCQKAIGIVHF 332
           V++D Q  +G+V F
Sbjct: 331 VINDQQNVVGLVEF 344


>gi|293602378|ref|ZP_06684824.1| arabinose 5-phosphate isomerase [Achromobacter piechaudii ATCC
           43553]
 gi|292819140|gb|EFF78175.1| arabinose 5-phosphate isomerase [Achromobacter piechaudii ATCC
           43553]
          Length = 329

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 136/325 (41%), Positives = 192/325 (59%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++ +  A R++  E +GL  L + L       F   V  + A +GRVV+TGIGK+GHI 
Sbjct: 9   SDAALASARRTLQVETQGLLDLSARL----DESFAQVVALLLACRGRVVVTGIGKTGHIA 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTP+FFVHAAEA HGDLGMIT+DD++I +S+SG+  EL  IL  ARR   
Sbjct: 65  RKIAATFASTGTPAFFVHAAEAVHGDLGMITKDDVVIAVSYSGAGQELLTILPVARRMGA 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+AIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F
Sbjct: 125 KLVAITGNPQSELARLADVHLDGSVAQEACPLNLAPTASTTAALALGDALAVACLEARGF 184

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG        DVM  GD++P+V  G P+  A+ ++S K  G   V D
Sbjct: 185 GPQDFARSHPGGALGRRLLTHVHDVMRQGDALPIVLAGTPVSQALEVMSAKGMGMTVVTD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +  GI T+GD+ R   +  D+ +L+VE  M ++P+ I  D L   A Q + +  +S 
Sbjct: 245 AQHRPLGIFTDGDLRRLIARHGDIRSLTVEAGMTRSPRTISPDALAVEAAQQMDELRLSQ 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++V+D     +G +H  DL+   ++
Sbjct: 305 MLVLDADGALLGALHMHDLMAAKVV 329


>gi|311031990|ref|ZP_07710080.1| KpsF/GutQ family protein [Bacillus sp. m3-13]
          Length = 329

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 118/319 (36%), Positives = 192/319 (60%), Gaps = 4/319 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
              +  +  E + + +L   ++         A+E I + KGRVVITGIGKSG IG K+ +
Sbjct: 12  TSIMDVLDKEAQAILNLREEIKSS-GESVQEALELILSCKGRVVITGIGKSGIIGRKINA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTGTPSFF+H +E  HGDLGM+T+DD++I +S SG ++E+  ++   +R    +I+I
Sbjct: 71  TMASTGTPSFFLHPSEGLHGDLGMVTKDDVVIAISNSGETEEVLNLIPSIKRIGAKIISI 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +   +++VL++    E+CP GLAPTTS  + LA+GDALA+ALLE+R F   DF
Sbjct: 131 VKNPNSTLGMKSNVVLSIGDVKEACPLGLAPTTSTTVTLALGDALAVALLEARKFRPEDF 190

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HP G LG    +  +DV+ + +  P++     + +A+ +++ +  G  +VVDE ++L
Sbjct: 191 ALFHPSGSLGRKLLLTVNDVVVATNKNPMILGSATIQEALFVMTAQGLGATSVVDENRQL 250

Query: 264 KGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI+T+GDI R F    D+   +VE+     P  I +  L   A+  + +  ISVL V+D
Sbjct: 251 QGILTDGDIRRAFASGMDILNRTVEEFCNTRPLCIEQGVLAVEALSTMDERKISVLPVLD 310

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  + +G++   DL+  G+
Sbjct: 311 EINRPVGMIQIHDLMNLGL 329


>gi|329905838|ref|ZP_08274226.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547478|gb|EGF32294.1| Arabinose 5-phosphate isomerase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 349

 Score =  328 bits (840), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 131/326 (40%), Positives = 181/326 (55%), Gaps = 6/326 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQ---FHCAVEKIKAIKGRVVITGIGKSGHI 78
             +  A  ++  E   L +L++ L          F  AV  +    GRVV++GIGKSGHI
Sbjct: 24  RALVLARETLQIEADALLTLKARLSDPAIDNAGCFAKAVGLLLDCTGRVVVSGIGKSGHI 83

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+TLASTGTPS FVH AEA+HGDLGMI   D+ + +S SG + EL AI+   +R  
Sbjct: 84  ARKIAATLASTGTPSLFVHPAEAAHGDLGMIGPQDVFVAISNSGETAELMAIVPSIKRMG 143

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ +T  + S +A  A + L +  + E+CP  LAPTTS    LA+GDALA+ALL++R 
Sbjct: 144 AVLVTMTGNDASSLARLATVHLNVAVDKEACPLNLAPTTSTTAALALGDALAVALLDARG 203

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG        DVM SG  IP V     L  A+  ++ K     AVV
Sbjct: 204 FRAEDFARSHPGGALGRRLLTHVRDVMRSGGEIPAVLATVSLSQALAEMTRKGMAMTAVV 263

Query: 258 DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           DE  +  G+ T+GD+ R     +D   L+V DVM  +P+ I  D L   A+Q++ +  I+
Sbjct: 264 DESFRPIGVFTDGDLRRLIEHVQDFTRLTVADVMHSDPRTIGPDQLAVDAVQVMEELRIN 323

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V D     +G +H  DL R  +I
Sbjct: 324 QLLVADAAGMLVGALHIHDLTRAKVI 349


>gi|289523513|ref|ZP_06440367.1| arabinose 5-phosphate isomerase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289503205|gb|EFD24369.1| arabinose 5-phosphate isomerase [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 339

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 133/325 (40%), Positives = 190/325 (58%), Gaps = 10/325 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++   R +  E + L++  S L  E+      A + I   KGRVV+ G+GKSG I  
Sbjct: 19  EELLEVGRRVLKQEAKELANASSRLGREI----IEAAKLIFDCKGRVVVCGLGKSGIIAK 74

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T AS GTPS F+HA E  HGDLGM+ R D+ I LS SG ++E+  ++ Y +RF IP
Sbjct: 75  KIAATFASLGTPSIFLHATEGVHGDLGMVCRGDVGIFLSNSGQTNEVLEVVPYFKRFGIP 134

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAIT    S +   AD+V+    E E+ P GLAPT+SA++QLAIGDALA+ + + R   
Sbjct: 135 IIAITGNVSSRLGKEADLVIDASVEREADPLGLAPTSSAVVQLAIGDALAVMVADLRKLK 194

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF + HPGG LG    +   DVM S D +P V     + +A+  ++ K +G   VVD+
Sbjct: 195 REDFALFHPGGSLGKKLLLKVRDVMGSEDKLPSVSHRATVREALFEITSKGYGATVVVDD 254

Query: 260 GQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
             KLKGI T+GD+ R         + +L + +VM KNPK I  D L    + L+ +H +S
Sbjct: 255 EGKLKGIFTDGDLRRLIEDRGEVGVLSLPIAEVMTKNPKTIDADELAAKGVLLMEKHEVS 314

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           VL VV+     IG+VH  D+L+ G+
Sbjct: 315 VL-VVEKDGLPIGMVHLHDMLKAGV 338


>gi|319765046|ref|YP_004128983.1| kpsf/gutq family protein [Alicycliphilus denitrificans BC]
 gi|330827238|ref|YP_004390541.1| KpsF/GutQ family protein [Alicycliphilus denitrificans K601]
 gi|317119607|gb|ADV02096.1| KpsF/GutQ family protein [Alicycliphilus denitrificans BC]
 gi|329312610|gb|AEB87025.1| KpsF/GutQ family protein [Alicycliphilus denitrificans K601]
          Length = 333

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 139/337 (41%), Positives = 190/337 (56%), Gaps = 7/337 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
             + T    S      ++    +   E   L        G L   F  AV+++ A  GRV
Sbjct: 1   MPTATAAFPSFNAEQALRLGRETFDIEAAAL----QGTGGRLGAVFVQAVQRVLATSGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           ++ G+GKSGH+G K+A+TLASTGTPSFFVH AEASHGDLGM+   DL++ +S SG S E+
Sbjct: 57  IVMGMGKSGHVGRKIAATLASTGTPSFFVHPAEASHGDLGMVAGGDLVLAISNSGESSEI 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +L   +R  +PLIA+T   +S +A HAD+VL    E E+CP  LAPTTS  +QLA+GD
Sbjct: 117 TVLLPMLKRQGVPLIAMTGGLQSTLARHADLVLDCSVEREACPLNLAPTTSTTVQLAMGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALA+ALL++R F   DF   HPGG LG        DVM +G  +P V         +  +
Sbjct: 177 ALAVALLDARGFRPEDFARSHPGGALGRRLLTHVRDVMRTGGQVPRVPPQADFSTLMREM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTV 304
           S K  G  AVVDE     GI T+GD+ R      DL  +  +DVM  +P+ I  D L   
Sbjct: 237 SAKGVGASAVVDEAGCPVGIFTDGDLRRRIEAGADLRGMRAQDVMHASPRTIAADALAAD 296

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A Q + +H+I+ ++V D     +G+VH  DL+R  +I
Sbjct: 297 AAQAMERHSITSVLVTDAQGVLVGVVHIGDLMRAKVI 333


>gi|256419822|ref|YP_003120475.1| KpsF/GutQ family protein [Chitinophaga pinensis DSM 2588]
 gi|256034730|gb|ACU58274.1| KpsF/GutQ family protein [Chitinophaga pinensis DSM 2588]
          Length = 324

 Score =  327 bits (839), Expect = 1e-87,   Method: Composition-based stats.
 Identities = 136/329 (41%), Positives = 194/329 (58%), Gaps = 11/329 (3%)

Query: 19  MKNSTV----QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           MKN TV    + A R++  E   +S L+  + G+    F  AVE I    GR+VI+GIGK
Sbjct: 1   MKNRTVINIAEVAKRTLSLEATAISDLKQYINGD----FEKAVEWIAECAGRLVISGIGK 56

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  IG K+ +TL STGTP+ F+HAA+A HGDLGMI  DD+I+ +S SG+S E+K ++   
Sbjct: 57  SAIIGQKIVATLNSTGTPAIFMHAADAIHGDLGMIQHDDIILCISKSGNSPEIKVLVPLV 116

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + F   LIA+    +S +A  A ++L    + E+CP+ LAPTTS   QLA+GDALA+ L+
Sbjct: 117 KNFGNRLIAMVGNTESFLAREAHLILNTSVDQEACPNNLAPTTSTTAQLAMGDALAVCLI 176

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           E   FS  DF  +HPGG LG         +      P V     L + I  +S    G  
Sbjct: 177 EWHGFSAADFAKVHPGGTLGKKLYLKVGDLSRLHQAPQVTKQSALKEVIVAISSGMLGVT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           AV+D    L GIIT+GD+ R   K +   +++ E +M  +PK I ED L   A++++RQH
Sbjct: 237 AVLDAEGSLSGIITDGDLRRMLEKGIPGESVTAEVIMSTHPKTIQEDELAVNALEMMRQH 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +I+ L+V+   ++ IGI+H  DL+R GII
Sbjct: 297 DITQLLVL-KDKRYIGIIHLHDLIREGII 324


>gi|152989815|ref|YP_001355537.1| arabinose-5-phosphate isomerase [Nitratiruptor sp. SB155-2]
 gi|151421676|dbj|BAF69180.1| arabinose-5-phosphate isomerase [Nitratiruptor sp. SB155-2]
          Length = 319

 Score =  327 bits (839), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 118/319 (36%), Positives = 190/319 (59%), Gaps = 8/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A   +  E + L   +  +   +      AVE I  IKG++++TG+GKSG +GSK+A+
Sbjct: 5   QIAKEVLDIESKALQDAKERIADNID----KAVELIYNIKGKLIVTGVGKSGLVGSKIAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGMI ++D ++ +S+SG S+EL  IL + +RF IPLI +
Sbjct: 61  TFASTGTPSFFIHPTEALHGDLGMIGKEDGVLAISYSGESEELIKILPHIKRFDIPLIGM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +S   S +  ++D+ +++  E E+CP   APT S  + +A+GDALA+ L++ RNF   DF
Sbjct: 121 SSNPDSSLGRYSDVFISIAVEKEACPLQAAPTASTTLTMALGDALAVCLMKKRNFQVKDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +    ++P++    PL +AI ++SE + G V + +   KL 
Sbjct: 181 ASFHPGGSLGRRLYVKVKDLMRTQNLPIINEETPLKEAIVVMSEGKLGNVLIKNGEGKLV 240

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
           G++++GD+ R       +L     +   K+PK+I  E+ L + A++L+ ++ I +L++V 
Sbjct: 241 GVLSDGDLRRALMSQNFSLDTPAIEYATKSPKMIDDENMLASDALKLIEEYKIQMLVIV- 299

Query: 322 DCQKAIGIVHFLDLLRFGI 340
                 G++H  DL+  GI
Sbjct: 300 KNGHIEGVLHIHDLVEAGI 318


>gi|332521095|ref|ZP_08397553.1| KpsF/GutQ family protein [Lacinutrix algicola 5H-3-7-4]
 gi|332043188|gb|EGI79385.1| KpsF/GutQ family protein [Lacinutrix algicola 5H-3-7-4]
          Length = 321

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 134/324 (41%), Positives = 188/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K S ++ A  +I  E   +++L S +  +    F  AVE I   KGRV+ITGIGKS  I 
Sbjct: 4   KESIIKLAKETITLESESINNLISLIDND----FADAVELIYNSKGRVIITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +TL STGTP+ F+HAA+A HGDLG+I  DD++I +S SG++ E+K ++   +    
Sbjct: 60  TKIVATLNSTGTPAVFMHAADAIHGDLGLILEDDVVICISKSGNTPEIKVLVPLIKNAKN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IAIT    S +   AD VL    + E+CP+ LAPTTS   QL IGDALA+ LLE R F
Sbjct: 120 KMIAITGNKTSFLGQQADYVLNAFVQKEACPNNLAPTTSTTAQLVIGDALAVCLLELRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG         + S +S P V     +   I  +SE   G  AVV E
Sbjct: 180 SSKDFAKYHPGGALGKKLYLRVQDLSSVNSKPQVAPDTNVKQVIIQISESMLGVTAVV-E 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + GIIT+GD+ R   K  D + L+ +D+M  NPK I ED +   AM+++  + IS L
Sbjct: 239 NNNIVGIITDGDLRRMLTKVDDFSKLTAKDIMSNNPKRIAEDAMAVDAMEIMESNGISQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V +   K  G+VH  +L++ GI+
Sbjct: 299 LV-EHDGKYAGVVHIHNLIKEGIL 321


>gi|52425051|ref|YP_088188.1| GutQ protein [Mannheimia succiniciproducens MBEL55E]
 gi|52307103|gb|AAU37603.1| GutQ protein [Mannheimia succiniciproducens MBEL55E]
          Length = 311

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 128/314 (40%), Positives = 186/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A  ++  EK  L+ L  +L       F+  ++ I    GR+VI GIGKSG IG K
Sbjct: 2   DYLQNARETLATEKDALTLLSRNLDQ----SFNNVIDLILNCGGRLVIGGIGKSGLIGRK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG SD++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGESDDVNKLIPSLKNFGNTI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HAD VL +  E E+CP+ LAPTTSA++ LA+GDALA+AL+ +R+F  
Sbjct: 118 IALTGNKHSTLAKHADYVLDISVEREACPNNLAPTTSALVTLALGDALAVALINARHFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C         ++P+  +     D +TI++E R G   V+ E  
Sbjct: 178 MDFAKFHPGGSLGRRLLCRVKDQMQT-NLPVTALNTSFTDCLTIMNEGRMGVALVM-END 235

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            LKGIIT+GDI R       D       ++M  NPKVI +DT +  A   +++H I  L+
Sbjct: 236 DLKGIITDGDIRRALAANGADTLNKVARELMTSNPKVINQDTYIGQAEDYMKEHRIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
           VVD+  K +G+V F
Sbjct: 296 VVDNDNKVVGLVEF 309


>gi|257454877|ref|ZP_05620128.1| arabinose 5-phosphate isomerase [Enhydrobacter aerosaccus SK60]
 gi|257447810|gb|EEV22802.1| arabinose 5-phosphate isomerase [Enhydrobacter aerosaccus SK60]
          Length = 322

 Score =  327 bits (838), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 116/320 (36%), Positives = 187/320 (58%), Gaps = 5/320 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             V+ A  +I  E+  L  L   L       F  A   I+  +GRVV+TG+GKSG IG K
Sbjct: 6   DYVKHAKDAIKTEQHALDLLIEQLDER----FVTACHLIENCQGRVVVTGMGKSGLIGRK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGTPSFF+H  EA HGDLGM+ + D++I +S SG SDE++ +L   ++  IPL
Sbjct: 62  IAATFASTGTPSFFMHPGEAGHGDLGMLVKGDVLIGISNSGESDEIRTLLPVVKKLGIPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+I+ + + ++   AD+ LTL    E+CP GLAPT+S    LA+GDALA+AL+ S++F+ 
Sbjct: 122 ISISRDKRGILPKSADVALTLGASEEACPLGLAPTSSTTATLALGDALAVALVHSKHFTS 181

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF + HP G LG   +     +   +++P +     L +A+  ++  R G   + +   
Sbjct: 182 EDFALSHPAGALGRKLLTQVKDLMHVNNLPTIDEHSTLNEALFSMTGGRLGMTVITNANN 241

Query: 262 KLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++ G+ T+GD+ R+  + L     + +VM  NPK +  D   + A+ L+ +  I+ L+++
Sbjct: 242 QVVGVFTDGDLRRSLARQLGLDTPISEVMSTNPKSVNPDMRASDALTLMNEQKINQLLII 301

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +D +   GI+   +LL  G+
Sbjct: 302 NDDKTLAGILTLHELLHAGV 321


>gi|152995154|ref|YP_001339989.1| KpsF/GutQ family protein [Marinomonas sp. MWYL1]
 gi|150836078|gb|ABR70054.1| KpsF/GutQ family protein [Marinomonas sp. MWYL1]
          Length = 342

 Score =  326 bits (837), Expect = 2e-87,   Method: Composition-based stats.
 Identities = 129/321 (40%), Positives = 190/321 (59%), Gaps = 8/321 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S   +  +  A R++  + + L++L      +++ +F  AV  I A KGR +I G+GKSG
Sbjct: 26  STHSDILIDSARRTLSTQAQALANLA----NQVTEEFPKAVRMILASKGRTIICGMGKSG 81

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG K+A+TLASTGTPSFF+H  EA HGDLGMI  +D+++++S+SG ++EL  +L   + 
Sbjct: 82  LIGKKIAATLASTGTPSFFLHPGEAFHGDLGMIQPEDVLVLISFSGETEELMRLLPSLKS 141

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F  P IA+     S +A H D VL L  + E+CP+ LAPTTS  M  A+GDALA+AL+E 
Sbjct: 142 FGNPSIAMVGNIDSTLAKHCDCVLDLSIDKETCPNNLAPTTSTTMTTAMGDALAVALMEC 201

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           RNF   DF   HPGG LG   +     +   D++P+      L DAI++++  R G V +
Sbjct: 202 RNFQPQDFARFHPGGSLGRKLLTRVKDLMHKDNLPICTPETTLKDAISVMTHGRMGVVLI 261

Query: 257 VDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             E  KL GI T+GD+ R   K    +   S+  +M  NPK I E+ ++  A + + +  
Sbjct: 262 -QEAGKLLGIFTDGDLRRAMLKESEGMIHKSMASLMTANPKTINENVMIVQAEEQMLRDK 320

Query: 314 ISVLMVVDDCQKAIGIVHFLD 334
           I++L+VVDD Q   GI+   D
Sbjct: 321 ITLLVVVDDAQNLSGILEIYD 341


>gi|212703574|ref|ZP_03311702.1| hypothetical protein DESPIG_01619 [Desulfovibrio piger ATCC 29098]
 gi|212672995|gb|EEB33478.1| hypothetical protein DESPIG_01619 [Desulfovibrio piger ATCC 29098]
          Length = 313

 Score =  326 bits (837), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 133/319 (41%), Positives = 188/319 (58%), Gaps = 6/319 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   +  A   +  E   L  L  SL       F  AV+ +  I GR+ +TG+GKSGH
Sbjct: 1   MTQGKFIPTAATVLYQEADALRVLADSLDT----AFDEAVDCLLHIDGRIAVTGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +  K+A+TLASTG+P+FF+H AEASHGDLGM+ + D ++  S SG + EL  I+ YA R+
Sbjct: 57  VARKVAATLASTGSPAFFIHPAEASHGDLGMLAKGDAVLAFSNSGETQELTDIIAYAARY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +PL+A+T    S++  +AD VL LP   E+CP G APTTS  MQLA+GDALA+ LL++ 
Sbjct: 117 RLPLVAVTKRPDSMLGKNADYVLQLPDVKEACPIGCAPTTSTTMQLALGDALALTLLQAH 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   DF   HPGGKLG       ++MH G+++PL     P+ D I I+S K FG V V 
Sbjct: 177 GFRPEDFRRFHPGGKLGKKLRQVKEIMHVGETLPLADPDTPMGDVIYIMSSKGFGAVGVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            E  KL G I++GD+ R+   DL      D+M  +P  +  + L+  A+ LL +  I+  
Sbjct: 237 -EKGKLIGFISDGDLRRHMAPDLLQKKARDIMSLHPFSLSPECLVEKALALLAERKITSS 295

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD   + IG +H  D+L
Sbjct: 296 FVVDHD-RVIGFIHVHDML 313


>gi|258645775|ref|ZP_05733244.1| arabinose 5-phosphate isomerase [Dialister invisus DSM 15470]
 gi|260403146|gb|EEW96693.1| arabinose 5-phosphate isomerase [Dialister invisus DSM 15470]
          Length = 323

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 138/326 (42%), Positives = 199/326 (61%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S+++ A+R +  E   + SL   L       F  AV+ I    GRV++TG+GKSGHI  K
Sbjct: 2   SSIETAIRVLRDEADAILSLIDKLDN----NFESAVDLILHANGRVILTGMGKSGHIAKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +++T+ASTGTPSFF+H AE  HGDLGM+T +D+++  S SG + E+  IL   +R    L
Sbjct: 58  VSATMASTGTPSFFLHPAEGIHGDLGMVTAEDVVVAYSNSGETGEILNILPSLKRIGAKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+     S +A +AD+VL      E+   GLAPT+S    LA+GDALA+AL+E  NF+ 
Sbjct: 118 IAVVGNTHSTLAENADVVLDAGVLQEADSLGLAPTSSTTAALALGDALAVALMEKENFTA 177

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + F V HPGG LG  L +    VMH G   P++K    + DA+ ++++   G V+VVD  
Sbjct: 178 DKFAVFHPGGSLGKRLLMTVEMVMHHGSDNPVIKETASVKDALFVMTKMGLGAVSVVDGK 237

Query: 261 QKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ---HNIS 315
            KLKG++T+GD+ R     KD   L++++VM +NP VI  D L   A+  + +   H I+
Sbjct: 238 FKLKGLMTDGDVRRGLEKEKDFLMLTIKEVMTQNPLVITADKLAAEALHKMEKHAPHPIT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL VVD   K+IG+VH  DLLR G++
Sbjct: 298 VLPVVDKDGKSIGMVHVTDLLRQGVV 323


>gi|251792555|ref|YP_003007281.1| arabinose 5-phosphate isomerase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533948|gb|ACS97194.1| arabinose 5-phosphate isomerase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 324

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 125/314 (39%), Positives = 186/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A  ++  E++ L  L   L       F   VE I A +GR+VI GIGKSG +G K
Sbjct: 15  DYLQIARETLSVEEKALGQLNQKLDRT----FADVVELILACEGRLVIGGIGKSGLVGKK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 71  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTS ++ +A+GDALA+ L+ +R+F  
Sbjct: 131 IALTSNKNSTLARHADYVLDISVEREVCPNNLAPTTSVVVTMALGDALAVCLMRARDFQP 190

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+  +     D +TI++E R G   V+ E Q
Sbjct: 191 EDFAKFHPGGSLGRRLLCRVKDQMQTR-LPIAALTTSFTDCLTIMNEGRMGVALVM-EQQ 248

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R    +       + +++M  +PK I +DT L+ A   ++ H I  L+
Sbjct: 249 QLRGIITDGDIRRALTANGANTLSKTAQELMTSHPKTIHQDTYLSEAENYMKAHKIHSLV 308

Query: 319 VVDDCQKAIGIVHF 332
           VVDD Q  +G+V F
Sbjct: 309 VVDDAQNVVGLVEF 322


>gi|317401286|gb|EFV81926.1| NDP-sugar epimerase [Achromobacter xylosoxidans C54]
          Length = 329

 Score =  326 bits (836), Expect = 3e-87,   Method: Composition-based stats.
 Identities = 133/325 (40%), Positives = 194/325 (59%), Gaps = 7/325 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A R++  E +G+  L + L       F   V  + A +GRVV++GIGK+GH+ 
Sbjct: 9   SETALASARRTLQIESQGILDLSARL----DDSFAQVVAMLLACRGRVVVSGIGKTGHVA 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+FFVHAAEA HGDLGMITRDD++I +S+SGS  EL  IL  ARR   
Sbjct: 65  RKIAATLASTGTPAFFVHAAEAVHGDLGMITRDDVLIAISYSGSGQELLTILPVARRMGA 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+AIT   +S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F
Sbjct: 125 GLVAITGNPQSELALLADVHLDASVAQEACPLNLAPTASTTAALALGDALAVACLEARGF 184

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              DF   HPGG LG        +VM  GD++P+V +G P+  A+ ++S K  G   V D
Sbjct: 185 GPQDFARSHPGGALGRRLLTHVRNVMRQGDALPVVALGTPVAQALEVMSAKGMGMTVVCD 244

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             ++  GI T+GD+ R   +  D+ +L+VE  M ++P+ I  D L   A + + +  ++ 
Sbjct: 245 PQRRPVGIFTDGDLRRLIARYGDIRSLNVEAGMTRSPRSINPDALAVEAARQMDELRLNH 304

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++V+D     +G +H  DL+   ++
Sbjct: 305 MLVLDADGSLLGALHMHDLMAAKVV 329


>gi|78776414|ref|YP_392729.1| KpsF/GutQ [Sulfurimonas denitrificans DSM 1251]
 gi|78496954|gb|ABB43494.1| KpsF/GutQ [Sulfurimonas denitrificans DSM 1251]
          Length = 320

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 124/319 (38%), Positives = 193/319 (60%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A  ++  E + L      +       F  AVE I   KG++++TG+GKSG IG+K+A+
Sbjct: 5   EIAQETLKIEAQTLLDSADKI----DDVFDKAVEIILTCKGKLIVTGVGKSGLIGAKMAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGMI+  D++I +S+SG S+EL +IL + +RF+ PLI +
Sbjct: 61  TFASTGTPSFFLHPTEALHGDLGMISHSDVVIAISYSGESEELSSILPHIKRFNTPLIGM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +  ++D+V+ +    E+CP G+APT+S  + LA+GDALA+ L+ ++NF ++DF
Sbjct: 121 TRDKNSTLGKYSDLVIDVIVNKEACPLGIAPTSSTTLTLALGDALAVCLMRAKNFKKSDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +     +P+VK    + DAI  +SE R G V V DE  +L 
Sbjct: 181 ASFHPGGALGKQLFVKVKDLMRVKELPIVKADTKVKDAIFKISEGRLGTVLVTDEQNRLL 240

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
            ++++GDI R    +  +L  SV     KNPK I  E+ L + A+ ++ +  I +L+V D
Sbjct: 241 ALMSDGDIRRALMSEDFSLEESVLKYATKNPKTIEDENILASEALVIIEEMKIQLLVVTD 300

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             ++ +G++H   L+  GI
Sbjct: 301 KHRRVLGVLHIHTLIEKGI 319


>gi|304393406|ref|ZP_07375334.1| arabinose 5-phosphate isomerase [Ahrensia sp. R2A130]
 gi|303294413|gb|EFL88785.1| arabinose 5-phosphate isomerase [Ahrensia sp. R2A130]
          Length = 323

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 167/321 (52%), Positives = 223/321 (69%), Gaps = 2/321 (0%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K      ALR++  E RGL++L  +L  E++  F  AV+ I  I GRV++TG+GKSGH+ 
Sbjct: 4   KTDPRASALRTLDTEARGLAALRDALGSEMAPAFQKAVDTIADIGGRVIVTGMGKSGHVA 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FFVH +EA+HGDLGMI RDD+I+ LS SG + EL   L YA+RFSI
Sbjct: 64  AKIAATLASTGTPAFFVHPSEANHGDLGMIARDDVIVALSKSGEAMELGGTLAYAKRFSI 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLIA+T++  S +  HAD++L LPK  E+CPH LAPTTSAIMQLA+GDALA+ALLE R+F
Sbjct: 124 PLIAMTADPLSTLGRHADVILQLPKVDEACPHNLAPTTSAIMQLALGDALAVALLEHRSF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S +DF V HPGGKLG      SDVMH+GD +PLV+ G  + +AI  +S K FGCV VV  
Sbjct: 184 SASDFSVFHPGGKLGAQLSMVSDVMHTGDELPLVQTGTQMTEAILQISAKGFGCVGVV-R 242

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L GI+T+GD+ R+    L    V+D+M   P+ +  D L   A+ +L + +I+ LMV
Sbjct: 243 DGLLIGIVTDGDLRRHLSTSLLGEMVDDIMTAAPQTVAPDLLAAAALDILNRRSITTLMV 302

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
             +  + +GIVH  DLLR G+
Sbjct: 303 T-EDGRPVGIVHLHDLLRVGV 322


>gi|332184342|gb|AEE26596.1| Arabinose 5-phosphate isomerase [Francisella cf. novicida 3523]
          Length = 323

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 132/326 (40%), Positives = 198/326 (60%), Gaps = 11/326 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            + +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 2   TNHIYNAVETFRLEIETLEKLKNSI----DENFEKACEIILKNNRDKGRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKYL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IA+TS  KS++A ++D+ L L  + E+CP  LAPT+S    L +GDALA+ALL+++
Sbjct: 118 DIPIIAMTSNPKSILAKNSDVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAVALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   +
Sbjct: 178 NFSVKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGSTLI 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           + E  KL GI T+GD+ R F  +      S+ +VM KNPK IL++ +   A++ + ++ I
Sbjct: 238 I-ENSKLLGIFTDGDLRRMFEAENFNSQRSISEVMTKNPKTILKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L VVD     +GI+   DL++ G+
Sbjct: 297 TSLAVVDHNHNILGIITMHDLIKLGL 322


>gi|313681267|ref|YP_004059005.1| kpsf/gutq family protein [Sulfuricurvum kujiense DSM 16994]
 gi|313154127|gb|ADR32805.1| KpsF/GutQ family protein [Sulfuricurvum kujiense DSM 16994]
          Length = 322

 Score =  326 bits (835), Expect = 4e-87,   Method: Composition-based stats.
 Identities = 130/325 (40%), Positives = 189/325 (58%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +  A  ++  E + L      L  E+      AVE I + KG++VITG+GKSG I
Sbjct: 1   MNNDYIAIAKNTLEIEAQALREGSERLGEEI----ARAVEIILSCKGKLVITGVGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+T ASTGTPSFF+H  EA HGDLGMI R+D ++ +S+SG S EL +IL + +RF 
Sbjct: 57  GAKIAATFASTGTPSFFLHPTEALHGDLGMIGREDAVLAISYSGESPELSSILPHIKRFD 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI +T    S +  ++D V+ +  E E+CP  +APT+S  + LA+GDALA+ L+++RN
Sbjct: 117 IPLIGMTRNAASTLGRYSDEVININVEHEACPLDIAPTSSTTLTLAMGDALAVCLMKARN 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F + DF   HPGG LG         +   +++P+V    PL +AI ILSE R G V + +
Sbjct: 177 FQKEDFASFHPGGALGKRLFVKVSDLMRTENLPIVNENTPLKEAILILSEGRLGTVMLTN 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNIS 315
              KL G++++GDI R    +  +L  S +    K P VI     L + A+ L+    I 
Sbjct: 237 NEGKLSGLLSDGDIRRALMSESFSLDASAKAYATKKPLVIDDASMLASDALVLIETKKIQ 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L+V D      G +H   L+  GI
Sbjct: 297 LLVVTDRAGVIQGALHLHTLVEAGI 321


>gi|208779870|ref|ZP_03247214.1| arabinose 5-phosphate isomerase [Francisella novicida FTG]
 gi|208744325|gb|EDZ90625.1| arabinose 5-phosphate isomerase [Francisella novicida FTG]
          Length = 323

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 196/324 (60%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKGRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 NIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNDHNILGIVTMHDLIKL 320


>gi|67459112|ref|YP_246736.1| KpsF protein [Rickettsia felis URRWXCal2]
 gi|67004645|gb|AAY61571.1| KpsF protein [Rickettsia felis URRWXCal2]
          Length = 319

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 126/321 (39%), Positives = 195/321 (60%), Gaps = 6/321 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++       F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYQIIAKRVISSEASALEKLSENI----PVDFNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + AIT    S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAITMNKNSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M  G+ IPLV       + I I+++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKIKNLMREGNEIPLVYEDTSFAETIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + +
Sbjct: 239 NQNLIGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIPI 298

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD     GI+H  DLLR G+
Sbjct: 299 VDD-NVITGIIHIHDLLRIGV 318


>gi|311746387|ref|ZP_07720172.1| carbohydrate isomerase, KpsF/GutQ family [Algoriphagus sp. PR1]
 gi|126575273|gb|EAZ79605.1| carbohydrate isomerase, KpsF/GutQ family [Algoriphagus sp. PR1]
          Length = 322

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 129/325 (39%), Positives = 183/325 (56%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +  +    A R +  E   +  L   L G+    F   VE +   KGRVVITG+GKS  I
Sbjct: 3   LAKNIRNTATRVLQNEANAILKLIDYLDGD----FVACVEHVLNSKGRVVITGVGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+ +TL STGTP+ F+HAA+A HGDLGMI  DD+++ +S SG++ E+K ++   +   
Sbjct: 59  AQKIVATLNSTGTPAIFMHAADAIHGDLGMIQEDDVVLCISKSGNTPEIKVLVPLLKNSG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+A+ S   S +A HA  VL      E+CPH LAPTTS    LAIGDALA+ LLE+R 
Sbjct: 119 SLLVALVSNTDSYLAEHATYVLNATISEEACPHNLAPTTSTTAHLAIGDALAVCLLEARG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+ +DF   HPGG LG         + + D +P V     L + I  +S KR G  +V+D
Sbjct: 179 FTSDDFAKYHPGGSLGKQLYLKVSDLLTKDQLPKVNEESGLAEVILEISGKRLGATSVID 238

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L GIIT+GD+ R   K  D+  L  +D+M   PK I +D     A+  ++++NI+ 
Sbjct: 239 GSGDLVGIITDGDLRRMLQKSLDIQKLKAKDIMTAKPKTISKDEFAIRALNQMKKYNITQ 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+ +D   K  G VH  DL++ GI+
Sbjct: 299 LVAMD-GNKIAGFVHIHDLMKEGIV 322


>gi|313500035|gb|ADR61401.1| KpsF/GutQ family protein [Pseudomonas putida BIRD-1]
          Length = 310

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 125/315 (39%), Positives = 182/315 (57%), Gaps = 8/315 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++IA+ + ++ L   + GE    F  AVE + + KGR V+ G+GKSG IG K
Sbjct: 2   NHLTIAKEALIAQAQAVTQLAGRIDGE----FQSAVELLLSCKGRAVVCGMGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG +DEL  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPAEAFHGDLGMLKPIDVLILISYSGETDELIKLIPSLKSFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HADI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F  
Sbjct: 118 IAMTGNGNSTLAKHADIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +      P+V       D + +++  R G  AV+DE  
Sbjct: 178 MDFARYHPGGSLGRKLLTRVRDVM-HSPAPVVSPSTSFHDCLLVMTRSRLGLTAVMDED- 235

Query: 262 KLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           KL GI+T+GD+ R   +D  +   +VE  M  +P  I ED  L+ A   +  + I  L V
Sbjct: 236 KLVGIVTDGDLRRALVEDEGVIHANVELFMTAHPHTIKEDAQLSEAEAYMLDNKIRALAV 295

Query: 320 VDDCQKAIGIVHFLD 334
           VDD    +G+V   D
Sbjct: 296 VDDQNSVVGVVEIFD 310


>gi|315634296|ref|ZP_07889583.1| arabinose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
 gi|315476886|gb|EFU67631.1| arabinose 5-phosphate isomerase [Aggregatibacter segnis ATCC 33393]
          Length = 311

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 124/314 (39%), Positives = 186/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  ++  E++ L  L   L       F   V+ I   KGR+VI GIGKSG +G K
Sbjct: 2   NYLQIARETLGVEEKALGQLSEKLDCT----FTEVVDLILNCKGRLVIGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTS ++ +A+GDALA+ L+ +R+F  
Sbjct: 118 IALTSNKNSTLARHADYVLDISVEREVCPNNLAPTTSVVVTMALGDALAVCLMRARDFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+  +     D +TI++E R G   V+ E Q
Sbjct: 178 EDFAKFHPGGSLGRRLLCRVKDQMQTR-LPIAALTTSFTDCLTIMNEGRMGVALVM-EQQ 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R    +       + +++M  +PK I +DT L+ A   ++ H I  L+
Sbjct: 236 QLRGIITDGDIRRALTANGANTLSKTAQELMTSHPKTIHQDTYLSEAENYMKAHKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VVDD Q  +G+V F
Sbjct: 296 VVDDAQNVVGLVEF 309


>gi|325284947|ref|YP_004260737.1| KpsF/GutQ family protein [Cellulophaga lytica DSM 7489]
 gi|324320401|gb|ADY27866.1| KpsF/GutQ family protein [Cellulophaga lytica DSM 7489]
          Length = 321

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 128/324 (39%), Positives = 191/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A R+I  E   + +L + L       F  AV  I   KGR++I+GIGKS  I 
Sbjct: 4   SKTIIDIAKRTISNEADAIKNLSNLLDT----NFTDAVNTIYNSKGRLIISGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTPS F+HAA+A HGDLG + +DD++I +S SG++ E+K ++   +R   
Sbjct: 60  QKIVATLNSTGTPSIFMHAADAIHGDLGTVLKDDVVICISKSGNTPEIKVLVPLIKRGGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI +T    S +A  ++ VL    E E+CP+ LAPTTS   QL IGDA+A++LLE + F
Sbjct: 120 VLIGMTGNTDSFLAQQSNYVLNTYVEKEACPNNLAPTTSTTAQLVIGDAIAVSLLELKRF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF   HPGG LG       + + + +  P VK   P+ + I  +SEK  G  AV+ E
Sbjct: 180 TSKDFAKYHPGGALGKKLYLRVNDIVNNNQKPEVKTNTPVKEVIVEISEKMLGATAVL-E 238

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GIIT+GDI R  +   ++  L+ +D+M KNPK +  D L   A++L++Q  IS L
Sbjct: 239 NDKVIGIITDGDIRRMLNTYDNIGNLTAKDIMSKNPKTVNTDVLAVDALELMQQQEISQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           + V D  K +G++H  +L+  GI+
Sbjct: 299 VAVKDS-KYVGLLHLHNLVNEGIL 321


>gi|295132999|ref|YP_003583675.1| sugar binding/sugar isomerase domain-containing protein
           [Zunongwangia profunda SM-A87]
 gi|294981014|gb|ADF51479.1| sugar binding/sugar isomerase domain-containing protein
           [Zunongwangia profunda SM-A87]
          Length = 321

 Score =  325 bits (834), Expect = 5e-87,   Method: Composition-based stats.
 Identities = 138/325 (42%), Positives = 192/325 (59%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++   +  A  ++  E + +++LE  +  E    F  AVE I   KGRV++TGIGKS  I
Sbjct: 3   LQQKILNVAKETVKIEAKAIANLEHLIDNE----FVEAVENIYNSKGRVIVTGIGKSAVI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           GSK+ +TL STGTP+ F+HAA+A HGDLG+I RDD++I +S SG+S E+K ++ + + F 
Sbjct: 59  GSKIVATLNSTGTPAIFMHAADAIHGDLGIIQRDDIVICISKSGNSPEIKVLVPFIKDFH 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIAIT+   S +   +D +L    E E+CP+ LAPTTS   QL IGDALAI LLE R 
Sbjct: 119 NTLIAITANRDSFLGKSSDFILNSYVEKEACPNNLAPTTSTTAQLVIGDALAICLLELRG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS+ DF   HPGG LG         +   +  P V     + DAI I+SE   G  AV+ 
Sbjct: 179 FSKEDFAKYHPGGSLGKKLYLRVKDIAQQNMKPSVSPETTVTDAIIIISENMLGVTAVL- 237

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  K+ GIIT+GDI R    +     L+  D+M  +PK I E+ L T A+ LL ++ IS 
Sbjct: 238 ENDKIVGIITDGDIRRMLKNNDEFKNLTAGDIMSTSPKSIDEEALATQALDLLEENKISQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+      K  G+VH  +L+R GI+
Sbjct: 298 LLAT-KNGKYSGVVHIHNLIREGIL 321


>gi|254480035|ref|ZP_05093283.1| sugar isomerase, KpsF/GutQ family [marine gamma proteobacterium
           HTCC2148]
 gi|214039597|gb|EEB80256.1| sugar isomerase, KpsF/GutQ family [marine gamma proteobacterium
           HTCC2148]
          Length = 308

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 134/310 (43%), Positives = 182/310 (58%), Gaps = 7/310 (2%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E   +S+L     G +   F  A + + A +GRV++TG+GKSGHIG K+A+TLASTGTP+
Sbjct: 2   EAEAVSAL----TGRIGADFERACQLLLACRGRVIVTGMGKSGHIGCKIAATLASTGTPA 57

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           FFVH  EASHGD+GMITR+D II LS SG   E+  +L   +R   P+IA+T    S +A
Sbjct: 58  FFVHPGEASHGDMGMITREDAIIALSNSGEVAEVVTLLPLLKRLGSPVIALTGNPHSTLA 117

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             AD  L    E E+CP  LAPT+S    L +GDALAIALLE R F+  DF   HPGG L
Sbjct: 118 LAADAHLNTGVETEACPLDLAPTSSTTTALVMGDALAIALLEQRGFTAEDFAFSHPGGTL 177

Query: 214 GTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           G    +   DVM +GDS+P V    PL  A+  +S K  G   V +   +L GI T+GD+
Sbjct: 178 GKKLLLKVQDVMQTGDSVPSVDAATPLSQALLEISNKGLGMTTVTNADGRLAGIFTDGDL 237

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   +  D+N   +  +M    K      L   A++++ +H I+ L+V+DD  +  GI+
Sbjct: 238 RRTLDQQIDINNTPIASLMSTGTKTANPQMLAAEALRIMEEHEITSLVVLDDSGETRGII 297

Query: 331 HFLDLLRFGI 340
           H + LL  GI
Sbjct: 298 HLMHLLHAGI 307


>gi|255020582|ref|ZP_05292645.1| Arabinose 5-phosphate isomerase [Acidithiobacillus caldus ATCC
           51756]
 gi|254969967|gb|EET27466.1| Arabinose 5-phosphate isomerase [Acidithiobacillus caldus ATCC
           51756]
          Length = 343

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 126/316 (39%), Positives = 187/316 (59%), Gaps = 7/316 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            ++  E   L++L   L       F  A + +   +GRVV+TG+GKSG I  K+A+TLAS
Sbjct: 32  ETLRLETAALAALVERL----DEHFVTACQLLLDCRGRVVVTGMGKSGIIAKKIAATLAS 87

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG+P+ F+H AE SHGDLGM+TRDD+++ LS+SG + EL AIL   +R  +PLIA+T   
Sbjct: 88  TGSPALFLHPAEGSHGDLGMLTRDDVLLALSYSGETAELLAILPVVKRLGVPLIAMTGRR 147

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  A++ L    E E+CP  LAPT S    LA+GDALA+ALL +R F+ +DF + H
Sbjct: 148 QSTLARLAEVHLDCRVEREACPLNLAPTASTTATLAMGDALAMALLRARGFTADDFALSH 207

Query: 209 PGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           PGG LG    +   D+M  G  +P V+   PL +AI  +S K  G   +VDE +++ GI 
Sbjct: 208 PGGALGRRLLLRVQDLMRRGADLPRVRPQTPLHEAILEMSGKGLGMTTIVDEQERVVGIF 267

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+GD+ R   +   +  L + ++    P+ I    L   A+  +    I+ L+++ D  +
Sbjct: 268 TDGDLRRALARGQGIWNLPMAELCHPRPRHIAATALAAEALAQMEAERINALLILRDDGQ 327

Query: 326 AIGIVHFLDLLRFGII 341
             GI+   DLLR GI+
Sbjct: 328 LEGILAMHDLLRAGIV 343


>gi|224373605|ref|YP_002607977.1| carbohydrate isomerase, KpsF/GutQ family [Nautilia profundicola
           AmH]
 gi|223588923|gb|ACM92659.1| carbohydrate isomerase, KpsF/GutQ family [Nautilia profundicola
           AmH]
          Length = 314

 Score =  325 bits (834), Expect = 6e-87,   Method: Composition-based stats.
 Identities = 123/318 (38%), Positives = 188/318 (59%), Gaps = 11/318 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   +  E   L  L +S++G        AVE     KG++++TG+GKSG IGSK+A+
Sbjct: 5   KIAREVLEIEANEL--LNASVEG-----IEKAVEIAYNTKGKLIVTGVGKSGLIGSKIAA 57

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  EA HGDLGMIT+DD ++ +S+SG S+EL  IL + +RF +PLIA+
Sbjct: 58  TLASTGTPSFFLHPTEALHGDLGMITKDDSVLAISYSGESEELIKILPHIKRFEVPLIAM 117

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A +AD+VL +    E+CP  +APT+S  + LA+GDALA+ L++ RNF++ DF
Sbjct: 118 TGKMNSTLARYADVVLNIHVNKEACPLNIAPTSSTTLTLAMGDALAVCLMKKRNFTKEDF 177

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +      P+      L +AI  ++E + G V  +D  +++K
Sbjct: 178 ASFHPGGSLGKKLFVKVKDLMK-REFPVADEDDTLQEAIIKMTEGKLGHVLFLD-NKRVK 235

Query: 265 GIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            I+++GD+ R    D   L  +  D    +PK I ++ L   A++ +  + I  L V D+
Sbjct: 236 AILSDGDLRRAMMSDKFDLKAKAIDFATIDPKTISKEVLAADALKFMEDNKIQFLPVTDE 295

Query: 323 CQKAIGIVHFLDLLRFGI 340
                G++H  +L+  GI
Sbjct: 296 NGNIAGVIHIHNLVEAGI 313


>gi|260429036|ref|ZP_05783013.1| arabinose 5-phosphate isomerase [Citreicella sp. SE45]
 gi|260419659|gb|EEX12912.1| arabinose 5-phosphate isomerase [Citreicella sp. SE45]
          Length = 321

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 131/316 (41%), Positives = 188/316 (59%), Gaps = 6/316 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A   +  E   L  L      EL   F   +  +  I GR++++G+GKSGH+  K+A+
Sbjct: 11  DIARTVLTTEAEALRRLAD----ELPASFEDVIALLLHINGRIIVSGMGKSGHVAGKIAA 66

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTG P+  VH  EASHGDLGMIT DD++I++S SG + EL  ++ +  RF+IP+IA+
Sbjct: 67  TLASTGAPAQVVHPGEASHGDLGMITPDDVVIMISNSGETRELADMIAHCARFAIPMIAM 126

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A  VL +P  PE+C  G+APTTS  M +A+GDALA+AL++ R F   +F
Sbjct: 127 TRRADSTLARSATHVLLMPDAPEACAIGMAPTTSTTMAMALGDALAVALMQERGFDRENF 186

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +  S VMH GD +P V+    + + + ++S+K FG  A+V E  KLK
Sbjct: 187 LAFHPGGSLGAQLLRVSAVMHRGDELPTVQADTSMGETLVVMSQKGFGVAALV-EDGKLK 245

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT+GD+ RN    L   +  +V   NP+ +  D LLT A+ ++    IS L  V+   
Sbjct: 246 GVITDGDLRRNLE-GLMERTAGEVATPNPRTVAPDALLTEALGMMNARKISSLFAVEADG 304

Query: 325 KAIGIVHFLDLLRFGI 340
             +G+VH  D LR G+
Sbjct: 305 TLVGLVHIHDALRAGV 320


>gi|83950844|ref|ZP_00959577.1| Sugar phosphate Isomerase [Roseovarius nubinhibens ISM]
 gi|83838743|gb|EAP78039.1| Sugar phosphate Isomerase [Roseovarius nubinhibens ISM]
          Length = 320

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 133/316 (42%), Positives = 190/316 (60%), Gaps = 6/316 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   +  E   L ++  +L    S  F   +E +  ++GRV+++G+GKSGHI  K+A+
Sbjct: 10  EIAREVLTIEGEALLAMREAL----SESFDRVIELLLDVRGRVIVSGMGKSGHIAHKIAA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTGTP+  VH  EASHGDLGMIT  D +I++S SG + EL  ++ + RRFSIPLIAI
Sbjct: 66  TMASTGTPAQMVHPGEASHGDLGMITAQDAVILISNSGETRELADMIAHTRRFSIPLIAI 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T + +S +   AD VL LP  PE+C  G+APTTS    LA+GDALA+AL+  R F   +F
Sbjct: 126 TKKAESTLGQQADHVLELPDAPEACGIGMAPTTSTTCTLALGDALAVALMTQRGFERENF 185

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +    VMH GD++P+V     + + +  ++ K FG  AVV E   L 
Sbjct: 186 LDFHPGGTLGAQLLKVGSVMHKGDALPIVHEHSSMGETLIEMTAKGFGVAAVV-ERGILT 244

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT+GD+ RN    L      ++  ++P+    D LLT A+ ++  + IS L VVD   
Sbjct: 245 GVITDGDLRRNLD-GLMERKAGEIATRHPRSTRPDILLTEALGVMNANKISALFVVDAEG 303

Query: 325 KAIGIVHFLDLLRFGI 340
           +  G+VH  D LR G+
Sbjct: 304 RLQGLVHIHDALRAGV 319


>gi|242309521|ref|ZP_04808676.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
 gi|239524092|gb|EEQ63958.1| conserved hypothetical protein [Helicobacter pullorum MIT 98-5489]
          Length = 313

 Score =  325 bits (833), Expect = 7e-87,   Method: Composition-based stats.
 Identities = 121/312 (38%), Positives = 179/312 (57%), Gaps = 6/312 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++ A      E   +  L+    G+LS  F+  VE I  +KG  VITG+GKSGHI  
Sbjct: 2   QDFIEIAKEVFEIESEAILELK----GQLSEDFNAVVECILKLKGHCVITGMGKSGHIAE 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGM+T++D +I +S SG S+E+  I+   ++  IP
Sbjct: 58  KIAATLASTGTPSFFLHPGEALHGDLGMLTKEDAVIAISNSGESEEILRIIPIIKKREIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++   KS +A      L +  + E+CP  LAPT+S    LA+GDA+A+AL+++R F 
Sbjct: 118 LIVMSGNPKSTMAKEGKYFLNVAVKKEACPLQLAPTSSTTATLAMGDAIAVALMKARGFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F + HPGG LG   +     +     +P+V +     D IT ++ KR G   V+D  
Sbjct: 178 PENFAMFHPGGSLGRKLLTQVKDIMVSKELPIVNLETNFKDLITEMTSKRLGVCLVLD-N 236

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L GIIT+GD+ R    D    +  ++M K PK I  D + T A  L+ +  I  L+V+
Sbjct: 237 GRLVGIITDGDLRRALMDDKFDSNAAEIMTKQPKTIQSDAMATQAESLMMESKIKELVVM 296

Query: 321 DDCQKAIGIVHF 332
            + +K +GIV  
Sbjct: 297 -EGEKVVGIVQL 307


>gi|77464734|ref|YP_354238.1| sugar phosphate isomerase [Rhodobacter sphaeroides 2.4.1]
 gi|77389152|gb|ABA80337.1| Sugar phosphate Isomerase [Rhodobacter sphaeroides 2.4.1]
          Length = 307

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 144/312 (46%), Positives = 196/312 (62%), Gaps = 9/312 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG K+ +TLASTG
Sbjct: 2   IEAETTALTMLGASL----DDSFGAAVETILRARGRVIVSGMGKSGHIGRKITATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF IPLI + S  +S
Sbjct: 58  TPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDIPLIGVASRAQS 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F+   F V HPG
Sbjct: 118 TLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQFTPEHFRVFHPG 177

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG      +D+MH    +PLV +G  + +A+  +S   FG + V     +L GIIT+G
Sbjct: 178 GKLGARLARVADLMH--RDLPLVAMGTSMGEALITMSRLGFGVLGVTGPEGRLAGIITDG 235

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIG 328
           D+ R+    L +LSVEDVM ++P  I  D L   A+ ++    I+ L VVD      A G
Sbjct: 236 DLRRHLD-GLLSLSVEDVMTRHPLTIAPDALAEKAVAVMNGRKITSLFVVDPEGSGAAEG 294

Query: 329 IVHFLDLLRFGI 340
           ++H  D LR G+
Sbjct: 295 LIHIHDCLRAGV 306


>gi|86133526|ref|ZP_01052108.1| sugar isomerase [Polaribacter sp. MED152]
 gi|85820389|gb|EAQ41536.1| sugar isomerase [Polaribacter sp. MED152]
          Length = 322

 Score =  324 bits (832), Expect = 8e-87,   Method: Composition-based stats.
 Identities = 125/324 (38%), Positives = 186/324 (57%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            K+S +  A  +I+AE + +S +   +       F  A+  I   KGRV+ITGIGKS +I
Sbjct: 3   DKSSIIANAKETILAESKAISQMAELV----DINFENAINCIYNSKGRVIITGIGKSANI 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            SK+ +T  STGTP+ F+HAA+A HGDLG +  DD++I +S SG++ E+K +L   + + 
Sbjct: 59  ASKIVATFNSTGTPAVFMHAADAIHGDLGNVLEDDVVICISKSGNTPEIKVLLPLIKNYG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IAIT    S +  +AD VL    E E+CP+ LAPTTS   QL +GDALA+ LL+ + 
Sbjct: 119 NKVIAITGNIDSFLGKNADFVLNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLKLKG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  DF   HPGG LG         +   + +P V+    +   I  +SEKR G  AV+D
Sbjct: 179 FTSKDFAKYHPGGALGKRLYLRVSDLIKNNELPKVEKDDSIAKVIVEISEKRLGVTAVMD 238

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               + GIIT+GD+ R   K   +   + +D+M KNPK I  + +   A++ L   +I+ 
Sbjct: 239 -NNTIVGIITDGDVRRMLTKTTQIENFTAKDIMGKNPKTINSEAMAIEALEALENDSITQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ VDD     G+VH  DL++ GI
Sbjct: 298 ILAVDDNNNYAGVVHLHDLIKEGI 321


>gi|312129259|ref|YP_003996599.1| kpsf/gutq family protein [Leadbetterella byssophila DSM 17132]
 gi|311905805|gb|ADQ16246.1| KpsF/GutQ family protein [Leadbetterella byssophila DSM 17132]
          Length = 324

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 125/325 (38%), Positives = 195/325 (60%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++ + +  A + +  E   + SL S++  E    F   V  I   +G+VV++GIGKS  I
Sbjct: 5   VEKNIIDTAKKVLADESEAIKSLISTIGSE----FEEVVNLILNSRGKVVLSGIGKSAII 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+++TL STG  + F+HA +A HGDLG+I  +D+I++LS SG++ ELK ++   RR  
Sbjct: 61  AQKISATLNSTGQKAVFMHATDAVHGDLGIIDDEDVIVILSKSGNTPELKVLIPLIRRLP 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+ + S+  S +A ++D VL      E+CP  LAPTTS  + LA+GDALA+ LLE+R 
Sbjct: 121 NKLVGMVSDLDSFLARNSDYVLNAHVNREACPMNLAPTTSTTVSLALGDALAVCLLEARG 180

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F++ DF   HPGG LG         ++  + +P+VK    + + I  ++ KR G  AV++
Sbjct: 181 FTKRDFAKYHPGGSLGKKLYLKVSDIYPNNEVPIVKEEAGMEEVILEMTSKRLGTTAVIN 240

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GIIT+GD+ R   +  D+ +L   D+M +NPKVI +D     A+ L+++ +I+ 
Sbjct: 241 EEGHLTGIITDGDLRRKLREKVDVFSLKALDLMSRNPKVIRKDDFAVNALNLMQELSITQ 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L VV + QK +G VH  DLLR G++
Sbjct: 301 L-VVAENQKVLGFVHLHDLLREGLV 324


>gi|42522385|ref|NP_967765.1| polysialic acid capsule expression protein [Bdellovibrio
           bacteriovorus HD100]
 gi|39574917|emb|CAE78758.1| polysialic acid capsule expression protein [Bdellovibrio
           bacteriovorus HD100]
          Length = 326

 Score =  324 bits (832), Expect = 9e-87,   Method: Composition-based stats.
 Identities = 130/328 (39%), Positives = 193/328 (58%), Gaps = 12/328 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +Q  L+ +  E + + +L+  L       F   V+ I A  G++V+TG+GKSG I  
Sbjct: 2   SKVIQQGLKVLEVEAQAILALKERL----GDSFEQVVKMITACDGKIVLTGMGKSGQIAR 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLAST +STGTP+ F+H AE+SHGDLG++  +D++I LS+ G S E   IL +  R  IP
Sbjct: 58  KLASTFSSTGTPAVFLHPAESSHGDLGLVENNDVVIALSYGGESPEFAGILRFVSRKGIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT + +S +A  A + L +    E+CP GLAPT S+   LA+GDA+A+A++  + FS
Sbjct: 118 LIAITGKPESSLAKAAQVTLNVHVSEEACPLGLAPTASSTATLAMGDAVAMAVMAEKGFS 177

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF-GCVAVVD 258
             DF   HPGG LG  L     DVMH GD++P V +  P+    +I++ K   G   +VD
Sbjct: 178 SEDFAEFHPGGSLGYRLLTRVRDVMHGGDALPTVTLDTPIRQVFSIMTHKDVRGAAGIVD 237

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L G+IT+GDI R   K  + L+   +D+M  NP+ I  + L   A+ ++ Q  I +
Sbjct: 238 EKGDLVGVITDGDIRRRLEKSNDPLTGLAKDLMTTNPRTIDANELAEKALFVMEQFQIQM 297

Query: 317 LMVVDDC----QKAIGIVHFLDLLRFGI 340
           + V+D      +K +GI+H  DLLR  +
Sbjct: 298 VFVLDKESSNPRKPVGILHIQDLLRAKV 325


>gi|118497807|ref|YP_898857.1| phosphosugar isomerase [Francisella tularensis subsp. novicida
           U112]
 gi|194323779|ref|ZP_03057555.1| arabinose 5-phosphate isomerase [Francisella tularensis subsp.
           novicida FTE]
 gi|118423713|gb|ABK90103.1| phosphosugar isomerase [Francisella novicida U112]
 gi|194322143|gb|EDX19625.1| arabinose 5-phosphate isomerase [Francisella tularensis subsp.
           novicida FTE]
          Length = 323

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 195/324 (60%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKGRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNDHNILGIVTMHDLIKL 320


>gi|255037354|ref|YP_003087975.1| KpsF/GutQ family protein [Dyadobacter fermentans DSM 18053]
 gi|254950110|gb|ACT94810.1| KpsF/GutQ family protein [Dyadobacter fermentans DSM 18053]
          Length = 324

 Score =  324 bits (832), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 119/325 (36%), Positives = 183/325 (56%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            +    A   +  E   +  L   +  E    F   V  I    GRVVI+G+GKS  +G 
Sbjct: 5   KNIQSIAKEVLRQEAEAVRDLIELIDDE----FEKCVYAILHSGGRVVISGVGKSAIVGQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGTP+ F+HAA+A HGDLGMI  +D++IV+S SG + E+K ++   +R  + 
Sbjct: 61  KIVATLNSTGTPALFMHAADAIHGDLGMIQDNDVVIVISKSGDTPEIKVLVPLLKRTGVK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+ S   S +A +  + L      E+ P  LAPTTS  + +A+GDALAI LLE+R F+
Sbjct: 121 MIAMVSNKDSYLAKNCILTLHAHAPAEADPLNLAPTTSTSVTMALGDALAICLLEARGFT 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG         ++  +++P V     L + I  ++ KR G  AVV E 
Sbjct: 181 HDDFARYHPGGSLGKRLYLKVCDIYPHNALPTVSEQATLQEVILEMTSKRLGATAVVSEN 240

Query: 261 QKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            ++ GIIT+GD+ R         L  L  +D+M K+P  +  D     A+++++  +I+ 
Sbjct: 241 GQMAGIITDGDLRRMLKTYGAAGLLDLHAKDIMTKSPITVSPDEYAVNALEVMQSKSITQ 300

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++VV++  KA+G VH  DLLR G++
Sbjct: 301 VVVVEE-GKALGFVHLHDLLREGLV 324


>gi|157803762|ref|YP_001492311.1| KpsF protein [Rickettsia canadensis str. McKiel]
 gi|157785025|gb|ABV73526.1| KpsF protein [Rickettsia canadensis str. McKiel]
          Length = 319

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 124/321 (38%), Positives = 193/321 (60%), Gaps = 6/321 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + +  GRV+ TGIGKSG+I 
Sbjct: 4   TNNYRTIAKRVISSEASALEKLSENIPED----FNTIIEFLLSFTGRVIFTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TRDDL+I++S SG + EL  I+ Y    SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRDDLVIMISNSGETKELFNIIEYCNNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+  E+   G  PT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYSEASVIG-VPTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF V HPGG +G       ++M SGD IPLV       + I ++++KR GC  V D+
Sbjct: 179 TKDDFKVYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAETIIVMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            Q L GIIT+GD+ R+ +  ++  +  ++M KNP  I  + L   A+ L++  NI+ + +
Sbjct: 239 NQNLVGIITDGDLRRHINAQIHLKTASNIMTKNPIHISSEILAKEALNLMKAKNITNVPI 298

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           +D      GI+H  DLLR G+
Sbjct: 299 ID-ANIITGIIHIHDLLRIGV 318


>gi|68250279|ref|YP_249391.1| arabinose-5-phosphate isomerase [Haemophilus influenzae 86-028NP]
 gi|68058478|gb|AAX88731.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           86-028NP]
          Length = 337

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/335 (37%), Positives = 189/335 (56%), Gaps = 11/335 (3%)

Query: 3   FYFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +F     +T    +L+  K + ++ A  S+  E   L  L   L       F+  ++ I
Sbjct: 7   VFFYDSAKITPISTALLGRKMNYLKIAQDSLSVESNALLQLSQRL----GEDFNQVIDLI 62

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+
Sbjct: 63  LACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISY 122

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA+
Sbjct: 123 SGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSAL 182

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           + LA+GDALA++L+ +RNF   DF   HPGG LG   +C             +       
Sbjct: 183 VTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPNTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           D +T+++E R G   V+ E ++LKGIIT+GDI R    +       + +D M  +PK I 
Sbjct: 242 DCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIH 300

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 301 QDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|284040793|ref|YP_003390723.1| KpsF/GutQ family protein [Spirosoma linguale DSM 74]
 gi|283820086|gb|ADB41924.1| KpsF/GutQ family protein [Spirosoma linguale DSM 74]
          Length = 322

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 134/319 (42%), Positives = 185/319 (57%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A   ++AE   +      L      QF+  V+ I    GR+V+TG+GKS  +G K+ +
Sbjct: 9   TIARSVLLAEAEAIRKAVDLL----DEQFNETVDTILNSSGRLVVTGVGKSALVGQKIVA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ STGTPS F+HAA+A HGDLGMI  +D+++++S SG++ E+K ++   +R  + LIA+
Sbjct: 65  TMNSTGTPSLFMHAADAIHGDLGMIQSNDVVLLISKSGNTAEIKVLIPLLKRTGVRLIAM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
            S   S +A HAD VL    E E+ P  LAPTTS  + LAIGDALA++LLE R F+  DF
Sbjct: 125 VSARDSYLANHADHVLHAYAEMEADPLNLAPTTSTTVALAIGDALAVSLLEIRGFTRQDF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +   +  P V  G PL D I  +S  R G  AVVDE   L 
Sbjct: 185 ARYHPGGSLGKRLYLKVADIFPHNKCPRVVPGTPLRDVIFTISANRLGATAVVDEEGTLA 244

Query: 265 GIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T+GDI R    H     L  +DVM   P  +  D    VA+QL+++ +IS L+VV+D
Sbjct: 245 GIVTDGDIRRTAYDHSTFWELCAQDVMTTQPVCVAPDEYAVVALQLMQERDISQLVVVED 304

Query: 323 CQKAIGIVHFLDLLRFGII 341
            Q  +G +H  DLLR G+I
Sbjct: 305 TQ-VLGFIHLHDLLREGLI 322


>gi|255531958|ref|YP_003092330.1| KpsF/GutQ family protein [Pedobacter heparinus DSM 2366]
 gi|255344942|gb|ACU04268.1| KpsF/GutQ family protein [Pedobacter heparinus DSM 2366]
          Length = 321

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 131/324 (40%), Positives = 191/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K S ++  + ++  E + +  L +++  +    F   V  I   KGRV++TGIGKS  I 
Sbjct: 4   KKSIIEAGVSTLQLEAQAILGLINNINDD----FVKVVNLIIESKGRVIVTGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T  STGTP+ F+HAA+A HGDLGMI +DD++I +S SG++ E+K +    ++   
Sbjct: 60  QKIVATFNSTGTPAIFMHAADAIHGDLGMIQKDDIVICISKSGNTPEIKVLAPLLKQSGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I +  +  S +A  AD+VL    E E+CPH LAPTTS   QLA+GDALAI LL +R+F
Sbjct: 120 TMIGMIGQLNSELAMQADLVLNTYVEKEACPHNLAPTTSTTAQLAMGDALAICLLHARDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF   HPGG LG      +  +   +  P +     + D I  +S+ R G V VVD 
Sbjct: 180 NEQDFARYHPGGSLGKKLYLKTGDLALKNQKPSICADASVKDVIIEISQNRLGAVVVVD- 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G  + GIIT+GDI R   K  DL  +   D+M  NPK I +D L   A+++++++NI+ L
Sbjct: 239 GNDILGIITDGDIRRMLEKYSDLTNIKASDLMNPNPKRIEKDLLALNALEIIKENNITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D      GIVH  DLL+ GII
Sbjct: 299 LVTD-AGSYFGIVHLHDLLQEGII 321


>gi|260582618|ref|ZP_05850407.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae NT127]
 gi|260094290|gb|EEW78189.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae NT127]
          Length = 337

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 126/335 (37%), Positives = 189/335 (56%), Gaps = 11/335 (3%)

Query: 3   FYFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +F     +T    +L+  + + ++ A  S+  E   L  L   L       F+  V+ I
Sbjct: 7   VFFYDSAKITPISTALLGRRMNYLKIAQDSLSVESNALLQLSQRL----GEDFNQVVDLI 62

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+
Sbjct: 63  LACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISY 122

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA+
Sbjct: 123 SGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSAL 182

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           + LA+GDALA++L+ +RNF   DF   HPGG LG   +C             +       
Sbjct: 183 VTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           D +T+++E R G   V+ E ++LKGIIT+GDI R    +       + +D M  +PK I 
Sbjct: 242 DCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIH 300

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 301 QDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|193213812|ref|YP_001995011.1| KpsF/GutQ family protein [Chloroherpeton thalassium ATCC 35110]
 gi|193087289|gb|ACF12564.1| KpsF/GutQ family protein [Chloroherpeton thalassium ATCC 35110]
          Length = 333

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 129/323 (39%), Positives = 204/323 (63%), Gaps = 8/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A ++++ E + L ++ + L      QF+ AV  I    G+V+ITG+GKSG I  K
Sbjct: 15  NFIDLARQTLLLESKALEAVSTRL----DEQFNAAVRLILNATGKVIITGMGKSGIIAQK 70

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ STGTP+ F+H +EA+HGDLG++++ D++I LS SG+++EL  IL   ++  + +
Sbjct: 71  IAATMTSTGTPAVFMHPSEAAHGDLGVVSKGDVVIGLSKSGTTEELLYILPALKQLQVQI 130

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+    +S +A  AD VL +  E E+CP+ LAPTTS    LA+GDALA+AL++++ FS+
Sbjct: 131 IAMVGNVRSALALRADAVLDVAVEKEACPYDLAPTTSTTAMLAMGDALAMALMQAKKFSQ 190

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-E 259
            DF V HP G LG  L +  +D+M + + +P+++        +  ++ KRFG   VVD E
Sbjct: 191 YDFAVTHPSGALGKRLTMRVADIMATRERLPIIQDTVSFTGLLLEMTSKRFGAAIVVDGE 250

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL G  T+GD+ R     KDL+ LS +DVM  NPK + ++TL    ++ +  H I+ +
Sbjct: 251 TGKLVGFFTDGDLRRIVQTGKDLSRLSAKDVMTPNPKYLTKETLAKDCLETMEAHRITQM 310

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           ++ DD QK IGIVH  DL+  G+
Sbjct: 311 IICDDAQKPIGIVHIHDLVSLGL 333


>gi|94498204|ref|ZP_01304765.1| sugar isomerase, KpsF/GutQ [Sphingomonas sp. SKA58]
 gi|94422334|gb|EAT07374.1| sugar isomerase, KpsF/GutQ [Sphingomonas sp. SKA58]
          Length = 358

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 127/322 (39%), Positives = 195/322 (60%), Gaps = 3/322 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  V  A R++     GL +LE+     E +  F   V  +  ++GRV++TGIGKSG + 
Sbjct: 37  SRIVDTACRTLSIAAGGLQALEAQFSDREFAATFLRMVGMLMKVRGRVIVTGIGKSGIVA 96

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTP+ F+H A+A HGDLGM+T DD++++LS SG S EL  I+ Y +RF++
Sbjct: 97  RKMTATLTSTGTPAIFLHPADAGHGDLGMVTPDDVVLMLSHSGESTELGPIIQYCKRFAV 156

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PL+ +T++ +S VA  AD+ + +P   E+CP+ LAPTTS  +Q+A GDALA++L+E R F
Sbjct: 157 PLMGMTAQPQSTVAQAADVCILMPDVQEACPNALAPTTSTTVQMAFGDALAVSLMEMRGF 216

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S +DF+  HP G+LG   +   ++M S D +P+V+    L+DA   ++  R G  AVVD 
Sbjct: 217 SADDFHKFHPNGRLGAQLLKVRELMASDDQVPMVREDASLLDATIEMTRARLGGTAVVDR 276

Query: 260 GQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             +L G  T+GD+ R    K   T  V   M   P+ +  D L + A+ ++ + NI +L 
Sbjct: 277 NGRLIGAFTDGDLRRTVTGKQNLTEPVGRFMTVTPQAVGPDELASEALHMMHERNIMLLF 336

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V  +  +  G +H  DLL  G+
Sbjct: 337 VC-ENGRLTGALHMHDLLHAGV 357


>gi|260062260|ref|YP_003195340.1| capsule expression protein KpsF/GutQ [Robiginitalea biformata
           HTCC2501]
 gi|88783822|gb|EAR14993.1| capsule expression protein KpsF/GutQ [Robiginitalea biformata
           HTCC2501]
          Length = 321

 Score =  324 bits (831), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 128/325 (39%), Positives = 188/325 (57%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
              + ++ A ++I  E   +  L + L  +    F  AV  I    GRVVITGIGKS  I
Sbjct: 3   DSKAILEIARQTIALEGDAIHHLATLLTED----FSRAVSCILEADGRVVITGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            SK+ +TL STGTP+ ++HAA+A HGDLG I ++D++I +S SG++ E+K ++   ++  
Sbjct: 59  ASKIVATLNSTGTPAIYMHAADAIHGDLGTIQQNDVVICISKSGNTPEIKLLVPLIKQGG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            PLI +T    S +   AD  L    E E+CP+ LAPTTS   QL +GDALAI LLE R 
Sbjct: 119 NPLIGMTGSPDSFLGRRADYCLNTYVEKEACPNNLAPTTSTTAQLVLGDALAICLLELRG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF   HPGG LG         + + + +P V    P+ DAI  +SEK  G  AV+D
Sbjct: 179 FSSRDFARYHPGGTLGKKLYLRVGDIAAQNQVPQVSGDTPVKDAIVEISEKMLGVTAVMD 238

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            G ++ GIIT+GDI R  +K  ++  L   D+M   PK +  + L   A+Q++ +++IS 
Sbjct: 239 -GDRVAGIITDGDIRRMLNKHDNIAGLRARDIMTTGPKTVDSEVLAVKALQMMEENDISQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+      + IG+VH  +L++ GI+
Sbjct: 298 LLAT-RDGRYIGVVHIHNLIKEGIL 321


>gi|241765938|ref|ZP_04763866.1| KpsF/GutQ family protein [Acidovorax delafieldii 2AN]
 gi|241364111|gb|EER59331.1| KpsF/GutQ family protein [Acidovorax delafieldii 2AN]
          Length = 331

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 137/328 (41%), Positives = 191/328 (58%), Gaps = 7/328 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
            L  +  ++ A  +   E        S++   L   F  AV+++    GRVV+ G+GKSG
Sbjct: 8   PLDPDQVLRLARETFDIEAAA----LSAMAARLDAHFVQAVQRVLQTTGRVVVMGMGKSG 63

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+G K+A+TLASTGTP+FFVH AEASHGDLGM+T DDL++ +S SG S EL  +L   RR
Sbjct: 64  HVGRKIAATLASTGTPAFFVHPAEASHGDLGMVTADDLVLAISNSGESGELTVLLPVLRR 123

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +P+IA+T   +S +A HAD+ L    + E+CP  LAPT S   QLA+GDALA+ALL++
Sbjct: 124 LGVPMIAMTGGLQSTLARHADLTLDCSVQREACPLNLAPTASTTAQLAMGDALAVALLDA 183

Query: 197 RNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F   DF   HPGG LG       SDVM SG+++P V       + +  +S K  G  A
Sbjct: 184 RGFRPEDFARSHPGGALGRKLLTHVSDVMRSGEAVPRVPPDASFSELMREMSAKGLGAAA 243

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD   ++ GI T+GD+ R      DL T +  +VM   P+ I  D L   A +++  H 
Sbjct: 244 VVDGAGQVLGIFTDGDLRRRIEAGADLRTATAGEVMHAKPRRIAADALAVDAAEMMESHG 303

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I+ ++VV       G+VH  DL+R  +I
Sbjct: 304 ITSVLVVGTDGALEGVVHIRDLMRAKVI 331


>gi|282856193|ref|ZP_06265476.1| arabinose 5-phosphate isomerase [Pyramidobacter piscolens W5455]
 gi|282585952|gb|EFB91237.1| arabinose 5-phosphate isomerase [Pyramidobacter piscolens W5455]
          Length = 340

 Score =  324 bits (830), Expect = 1e-86,   Method: Composition-based stats.
 Identities = 124/335 (37%), Positives = 194/335 (57%), Gaps = 8/335 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
              R+   L     ++   + +  E   L             +   A   ++A KGR+V+
Sbjct: 9   PSDRQPEKLSDEKLLEAGCQVLRHEAEELVRAAD----RFGLELVRAARLLEACKGRIVV 64

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           +GIGK+GHIG K+A+TL+S GTPSFF+ A+EA+HGDLGM+  +D+ +++S SG + E+ A
Sbjct: 65  SGIGKAGHIGRKIAATLSSLGTPSFFLQASEAAHGDLGMVRHEDVALLISNSGKTAEVVA 124

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L + RR   P+IA++ +  S +A  ADI L    E E+ P  LAPT+S  +QLAIGDAL
Sbjct: 125 LLPFFRRIGAPVIAVSGDAASPLALGADIFLNSAIEREADPLNLAPTSSTTLQLAIGDAL 184

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
              +   R   + DF + HP G LG    +   DVM++  S+P+V     + DA+  ++ 
Sbjct: 185 GAMVTLLRGLKKEDFALFHPAGSLGKKLLLRVCDVMNTSGSLPVVSHETLVKDALFEITS 244

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVA 305
           K +G  +VVD+   L GI T+GD+ R   K+        VEDVMI +P+ I+ + L   A
Sbjct: 245 KNYGATSVVDDKGFLVGIFTDGDLRRLIAKEGIRCLDRRVEDVMIGSPRTIVPEALAAEA 304

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++ +  ISVL+VVD  ++ +G+VH  +LL+ G+
Sbjct: 305 VHIMEKLEISVLIVVDKDRRPVGMVHIHELLQSGV 339


>gi|221640648|ref|YP_002526910.1| KpsF/GutQ family protein [Rhodobacter sphaeroides KD131]
 gi|221161429|gb|ACM02409.1| KpsF/GutQ family protein [Rhodobacter sphaeroides KD131]
          Length = 307

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 144/312 (46%), Positives = 195/312 (62%), Gaps = 9/312 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I AE   L+ L +SL       F  AVE I   +GRV+++G+GKSGHIG K+ +TLASTG
Sbjct: 2   IEAETTALTMLGASL----DDSFGAAVETILRARGRVIVSGMGKSGHIGRKITATLASTG 57

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+ FVH AEASHGDLGM+TRDD+ +VLS SG + EL  I+ + RRF IPLI + S  +S
Sbjct: 58  TPAQFVHPAEASHGDLGMVTRDDVALVLSNSGETPELADIIAHTRRFDIPLIGVASRAQS 117

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +   +D+ L LP  PE+C +G+ PT+S  M LA+GDALA+AL+E R F+   F V HPG
Sbjct: 118 TLLRQSDVALLLPPAPEACGNGIVPTSSTTMTLALGDALAVALMEHRQFTPEHFRVFHPG 177

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GKLG      +D+MH    +PLV +G  + +A+  +S   FG + V     +L GIIT+G
Sbjct: 178 GKLGARLARVADLMH--RDLPLVAMGTSMGEALITMSRLGFGVLGVTGPEGRLAGIITDG 235

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIG 328
           D+ R+    L +LSVEDVM + P  I  D L   A+ ++    I+ L VVD      A G
Sbjct: 236 DLRRHLD-GLLSLSVEDVMTRTPLTIAPDALAEKAVAVMNGRKITSLFVVDPEGSGAAEG 294

Query: 329 IVHFLDLLRFGI 340
           ++H  D LR G+
Sbjct: 295 LIHIHDCLRAGV 306


>gi|167627692|ref|YP_001678192.1| arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
 gi|167597693|gb|ABZ87691.1| Arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25017]
          Length = 320

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 192/323 (59%), Gaps = 9/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGS 80
           + +Q A  +   E + L  L++S+  +    F  A + I   K GRV+ITG+GKSG IG 
Sbjct: 2   NHIQNAKLTFELEIQALEKLKNSIGDD----FKKACDIILNNKQGRVIITGMGKSGQIGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH  EA HGD GMIT  D+++ +S SG+S E+  I+   +   IP
Sbjct: 58  KIAATLASTGTPAFFVHPGEAGHGDFGMITDKDVVVAISNSGNSSEIMGIMPMIKHLGIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I+ITS   S++A ++D+ L L  + E+CP  LAPT+S    L +GDALAIALL+++NFS
Sbjct: 118 VISITSNKNSLMAKNSDVTLNLGVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFS 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HP G LG   +    ++M  G+ IP VK    L  AI  +S+K  G   VV E
Sbjct: 178 ARDFAFSHPSGALGRKLILKVENIMRKGNEIPKVKSTDNLRKAILEISDKGIGSTLVV-E 236

Query: 260 GQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R F  +      ++ +VM KNPK +  D +   A++ + +  I+ L
Sbjct: 237 DNKLLGIFTDGDLRRMFEAESFNSQKTISEVMSKNPKTVSSDEMAISALEEMERFEITSL 296

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            VVD      GI+   DL++ G+
Sbjct: 297 AVVDGKNNVEGIITMHDLVKLGL 319


>gi|315930952|gb|EFV09927.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni 327]
          Length = 315

 Score =  324 bits (830), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 117/314 (37%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +A   DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLAKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKIRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D I +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLIDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLIGIITDGDLRRALKASDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           VV    K +GI+  
Sbjct: 296 VVSKENKVVGIIQL 309


>gi|110636722|ref|YP_676929.1| KpsF/GutQ family sugar isomerase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279403|gb|ABG57589.1| sugar phosphate isomerase, KpsF/GutQ family [Cytophaga hutchinsonii
           ATCC 33406]
          Length = 322

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 130/325 (40%), Positives = 185/325 (56%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +  + V      I+ E   + +L + +  +    F   ++ I + KGRVVITGIGKS  I
Sbjct: 3   LTKNIVSIVTDVILNESEAIKNLVNHINDD----FQHIIDAILSCKGRVVITGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+ +TL STGTP+ F+HAA+A HGDLGMI   D++I +S SG++ E+K ++   +   
Sbjct: 59  GNKIVATLNSTGTPALFMHAADAIHGDLGMIQGGDVVICISKSGNTPEIKVLVPLIKNRG 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI +     S +A  +D VL +  E E+CP+ LAPTTS    L +GDALA+ALLE RN
Sbjct: 119 TILIGMVGNVDSYLAVQSDYVLNVTVEREACPNNLAPTTSTTATLVMGDALAVALLECRN 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF  LHPGG LG       + +++ +  P+V     + D I  +S KR G  AVVD
Sbjct: 179 FSSEDFAQLHPGGALGKQLYLRVNDVYTANEKPMVAPDATVKDVILEISSKRLGAAAVVD 238

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L+GIIT+GD+ R    H     L   D+M K PK I  D     AM L++  NI+ 
Sbjct: 239 SAGILQGIITDGDLRRMLNAHDSFKQLCAADIMTKAPKTIDADEFAASAMLLMQSKNITQ 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+V+ +     G +H  DLL+ GI+
Sbjct: 299 LIVMKNEN-FAGFIHIHDLLKEGIV 322


>gi|258404460|ref|YP_003197202.1| KpsF/GutQ family protein [Desulfohalobium retbaense DSM 5692]
 gi|257796687|gb|ACV67624.1| KpsF/GutQ family protein [Desulfohalobium retbaense DSM 5692]
          Length = 340

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 125/322 (38%), Positives = 182/322 (56%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   ++     +  E  GL ++ +SL       F  AVE +   +GRVV+TG+GKSG +G
Sbjct: 18  QADWLRLGCDVLDVEIEGLQAIRASL----GESFVEAVEVLAGCRGRVVVTGLGKSGLVG 73

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TL+STGTP++F+H  E +HGD+G+I + D+++ LS SG +DEL AIL   R    
Sbjct: 74  RKIAATLSSTGTPAYFLHPVEGAHGDMGLIRKGDVVLALSNSGETDELNAILPTLRSLGA 133

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+TS+  S +A  +D+VL      E+CP GLAPT S    LA+GDALA+ LL  R+F
Sbjct: 134 RLIALTSDPDSRMARESDVVLQTRVPREACPLGLAPTASTTAALAMGDALAVCLLTHRSF 193

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF   HPGG LG         +     +PLV  G  L  A+ +L+    G V VVD+
Sbjct: 194 DSQDFKRYHPGGSLGRRLRQCLKDLMHTVQVPLVMEGVSLQQALEVLNSGGLGTVVVVDQ 253

Query: 260 GQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L G++T+GD+ R   +      + VE +M   P  +  +     A+ +L Q  I+VL
Sbjct: 254 EHRLAGVLTDGDVRRLVCRGGLDVAVPVETLMTVRPSAVHPEQSAAEALDILEQKAITVL 313

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            VVD  ++  GI+H  DLL  G
Sbjct: 314 PVVDAERRLQGIIHLHDLLGKG 335


>gi|78188445|ref|YP_378783.1| KpsF/GutQ [Chlorobium chlorochromatii CaD3]
 gi|78170644|gb|ABB27740.1| KpsF/GutQ [Chlorobium chlorochromatii CaD3]
          Length = 328

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 117/318 (36%), Positives = 192/318 (60%), Gaps = 7/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              + +  E + ++ +   L       F  A++ + A KG+V+++G+GKSG I  K+A+T
Sbjct: 15  IGRQILEQEAQAIAHIAEHL----DHHFAEAIQVMVACKGKVIVSGMGKSGIIAQKIAAT 70

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           +ASTGT + F+H A+A+HGDLG++  +D+++ LS SGS++EL  I+   R+    +I +T
Sbjct: 71  MASTGTTALFLHPADAAHGDLGVVAAEDVVLCLSKSGSTEELNFIIPPLRQLGAKIIVMT 130

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A +ADI L      E+CP+ LAPTTS    LA+GDALAI L++ + F+++DF 
Sbjct: 131 GNPRSFLAQNADITLNTGVAKEACPYDLAPTTSTTAMLAMGDALAITLMQQKKFTQHDFA 190

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HP G LG    V  SD+M + +++P+V+    + + I  ++ KR+G  AVV+E  +L 
Sbjct: 191 LTHPKGSLGRRLTVKVSDIMATENAVPMVRTNAAVTELILEMTSKRYGVSAVVNENGELA 250

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R     +    L   +VM   PK +  D L    + +L ++ I+ L+V D+
Sbjct: 251 GIFTDGDLRRLVQSGRKFLALQAGEVMTARPKTVPPDMLARECLDILEEYRITQLLVCDN 310

Query: 323 CQKAIGIVHFLDLLRFGI 340
            Q+ IG+VH  DLL  G+
Sbjct: 311 HQRPIGVVHIHDLLTLGL 328


>gi|121612774|ref|YP_001001093.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81-176]
 gi|62754291|gb|AAX99155.1| KpsF [Campylobacter jejuni subsp. jejuni 81-176]
 gi|87249745|gb|EAQ72704.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81-176]
          Length = 315

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 115/314 (36%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +   +DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           VV    K +GI+  
Sbjct: 296 VVSKEDKVVGIIQL 309


>gi|305432235|ref|ZP_07401398.1| arabinose-5-phosphate isomerase [Campylobacter coli JV20]
 gi|304444583|gb|EFM37233.1| arabinose-5-phosphate isomerase [Campylobacter coli JV20]
          Length = 317

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 116/317 (36%), Positives = 182/317 (57%), Gaps = 9/317 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK  T++ A      E + +  L  +L       F  A+E +   KGR +++G+GKSGHI
Sbjct: 1   MKIDTLKIAKEVFATEAKAIEDLALNL----DENFSKAIELMLHTKGRCIVSGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTPSFF+H  EA HGDLGM+T DD++I +S SG ++E+  I+   ++  
Sbjct: 57  GAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDVLIAISNSGETEEILKIIPAIKKRK 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLIA+  +  S +    D+ L +  + E+CP  LAP +S    L +GDALA AL+++RN
Sbjct: 117 IPLIAMCGKKNSTLVKQGDVFLNISVKEEACPLQLAPMSSTTATLVMGDALAAALMKARN 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F  +DF + HPGG LG   +     +    ++P+V       D + +++  + G   VV 
Sbjct: 177 FRPDDFALFHPGGSLGRKLLTRVSDLMVSKNLPIVHPDTEFNDLVDVMTSGKLGLCLVV- 235

Query: 259 EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           E +KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I 
Sbjct: 236 ENEKLVGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVVDADAMASEAEEIMLKYKIK 295

Query: 316 VLMVVDDCQKAIGIVHF 332
             +VV    K +GI+  
Sbjct: 296 E-IVVSKEDKVVGIIQL 311


>gi|241668267|ref|ZP_04755845.1| arabinose-5-phosphate isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254876800|ref|ZP_05249510.1| phosphosugar isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
 gi|254842821|gb|EET21235.1| phosphosugar isomerase [Francisella philomiragia subsp.
           philomiragia ATCC 25015]
          Length = 320

 Score =  323 bits (829), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 191/323 (59%), Gaps = 9/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGS 80
             +Q A  +   E + L  L++S+  +    F  A + I   K GRV+ITG+GKSG IG 
Sbjct: 2   DHIQNAKLTFELEIQALEKLKNSIGDD----FKKACDIILNNKQGRVIITGMGKSGQIGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH  EA HGD GMIT  D+++ +S SG+S E+  I+   +   IP
Sbjct: 58  KIAATLASTGTPAFFVHPGEAGHGDFGMITDKDVVVAISNSGNSSEIMGIMPMIKHLGIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I+ITS   S++A ++D+ L L  + E+CP  LAPT+S    L +GDALAIALL+++NFS
Sbjct: 118 VISITSNKNSLMAKNSDVTLNLGVDKEACPLNLAPTSSTTATLVLGDALAIALLKAKNFS 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HP G LG   +    ++M  G+ IP VK    L  AI  +S+K  G   VV E
Sbjct: 178 ARDFAFSHPSGALGRKLILKVENIMRKGNEIPKVKSTDNLRKAILEISDKGIGSTLVV-E 236

Query: 260 GQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GI T+GD+ R F  +      ++ +VM KNPK +  D +   A++ + +  I+ L
Sbjct: 237 DNKLLGIFTDGDLRRMFEAESFNSQKTISEVMSKNPKTVSSDEMAISALEEMERFEITSL 296

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            VVD      GI+   DL++ G+
Sbjct: 297 AVVDGKNNVEGIITMHDLVKLGL 319


>gi|332678524|gb|AEE87653.1| Arabinose 5-phosphate isomerase [Francisella cf. novicida Fx1]
          Length = 323

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 196/324 (60%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKGRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 NIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENSTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNDHSILGIVTMHDLIKL 320


>gi|213962152|ref|ZP_03390416.1| arabinose 5-phosphate isomerase [Capnocytophaga sputigena Capno]
 gi|213955158|gb|EEB66476.1| arabinose 5-phosphate isomerase [Capnocytophaga sputigena Capno]
          Length = 320

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 125/326 (38%), Positives = 191/326 (58%), Gaps = 8/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A ++I  E + ++ L   +  +    F  +V+ I   KGRVVITGIGKS  
Sbjct: 1   MNSEEIITSAKQTITEEAQAIAKLIDYIDDD----FTKSVQYILQSKGRVVITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +T+ STGTP+ F+HAA+A HGDLG+I +DD++I +S SG++ E+K ++   +R 
Sbjct: 57  IANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQDDVVICISKSGNTPEIKVLVPLLKRG 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  LIAITS   SV+A  AD VL    + E+CP+ LAPTTS   QL +GDALA+ LLE +
Sbjct: 117 NNKLIAITSNKNSVLAQQADSVLYAHVDKEACPNNLAPTTSTTAQLVLGDALAVCLLEMK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F  +DF   HPGG LG         + S +  P V     +   I  +SEK  G  AV+
Sbjct: 177 HFGSSDFAKYHPGGALGKRLYLKVSDIVSHNQKPEVSPDTDIKKVIVEISEKMLGVTAVL 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +   ++ GI+T+GDI R   K   +  L+ +D+M  NPK I  D L   A+ L+ ++ I+
Sbjct: 237 N-NHQIVGIVTDGDIRRMLSKTDSIKGLTAKDIMSVNPKTIEVDCLAIDALHLMEKNKIT 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+      + +GI+H  +L++ G+I
Sbjct: 296 QLLAT-KQGEYVGIIHLHNLIQEGLI 320


>gi|167753113|ref|ZP_02425240.1| hypothetical protein ALIPUT_01384 [Alistipes putredinis DSM 17216]
 gi|167659427|gb|EDS03557.1| hypothetical protein ALIPUT_01384 [Alistipes putredinis DSM 17216]
          Length = 321

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 124/319 (38%), Positives = 188/319 (58%), Gaps = 8/319 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  A ++I  E   L  LE +L  +    F CAVE I   +G++V+TG+GKSG IG
Sbjct: 6   RADILSLARKTIHTEALALKHLEQTLGDD----FVCAVELILHSRGKLVVTGMGKSGLIG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA HGDLGMI+ +D ++ LS+SG +DE+  I+ +      
Sbjct: 62  RKIAATLASTGTPSFFLHPGEAFHGDLGMISPEDTVLALSYSGETDEILKIVPFIHTNGN 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T   +S +A ++D+ L +    E+C   LAPTTS   Q+A+GDA+A+AL++ RNF
Sbjct: 122 KLISMTGNPESTLARNSDVHLDVAVRHEACILHLAPTTSTTAQIAMGDAMAVALMKLRNF 181

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF  LHPGG LG   +     +   + +P+V   C   D I  +S+   G + +  E
Sbjct: 182 TSIDFARLHPGGSLGRRLLMTVGNVMHKEGLPVVAPDCSAKDMIHAVSKGGLGLIVIC-E 240

Query: 260 GQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           G K+ GI+T+GDI R   +   +  ++   D+   NPK I  D  L  A + + QH I+ 
Sbjct: 241 GDKVLGIVTDGDIRRAMERRESEFFSIRAMDIATLNPKTIGPDEKLIAAEKKMTQHKINS 300

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L+V DD  K +G++   D+
Sbjct: 301 LLVTDDEGKLVGVIQIYDI 319


>gi|307293719|ref|ZP_07573563.1| KpsF/GutQ family protein [Sphingobium chlorophenolicum L-1]
 gi|306879870|gb|EFN11087.1| KpsF/GutQ family protein [Sphingobium chlorophenolicum L-1]
          Length = 335

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 129/318 (40%), Positives = 193/318 (60%), Gaps = 3/318 (0%)

Query: 25  QCALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           + A R++     GL++LE+     E S  F   V  I  ++GR+++TGIGKSG +  K+ 
Sbjct: 18  ETARRTLSIAAEGLNALEAKFADREFSAHFLRMVGVIMNVRGRLIVTGIGKSGIVARKMT 77

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STGTP+ F+H A+A HGDLGM+T DD++++LS SG S EL  I+ Y +RF+IPL+ 
Sbjct: 78  ATLTSTGTPAIFLHPADAGHGDLGMVTPDDVVLMLSHSGESSELGPIIQYCKRFAIPLLG 137

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S VA  +DI + +P   E+CP+ LAPTTS  +Q+A GDALAI+L+E R FS +D
Sbjct: 138 MTARPHSTVAAASDICILMPNVKEACPNALAPTTSTTIQMAFGDALAISLMEMRGFSADD 197

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+  HP G+LG   V   ++M SGD +P V+    L+DA   ++  R G  AVV+    L
Sbjct: 198 FHKFHPNGRLGAQLVKVRELMASGDDVPRVEEDASLLDATIEMTRARLGGTAVVNGEGAL 257

Query: 264 KGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            G  T+GD+ R      +    V   M   P  +  + L + A++L+  HNI++L V + 
Sbjct: 258 IGAFTDGDLRRTVTGTRHMNEPVGRYMTVEPLSVGPEELASEALRLMHDHNITLLFVCEK 317

Query: 323 CQKAIGIVHFLDLLRFGI 340
             + +G +H  DLL  G+
Sbjct: 318 D-RLVGALHMHDLLHAGV 334


>gi|134301645|ref|YP_001121613.1| KpsF/GutQ family sugar isomerase [Francisella tularensis subsp.
           tularensis WY96-3418]
 gi|134049422|gb|ABO46493.1| sugar isomerase, KpsF/GutQ family [Francisella tularensis subsp.
           tularensis WY96-3418]
          Length = 323

 Score =  323 bits (828), Expect = 2e-86,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      K RV+ITG+GKSGH
Sbjct: 2   TSHINNAIETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKSRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNGHNILGIVTMHDLIKL 320


>gi|292489535|ref|YP_003532423.1| putative phosphosugar isomerase [Erwinia amylovora CFBP1430]
 gi|292898251|ref|YP_003537620.1| phosphosugar binding protein [Erwinia amylovora ATCC 49946]
 gi|291198099|emb|CBJ45202.1| putative phosphosugar binding protein [Erwinia amylovora ATCC
           49946]
 gi|291554970|emb|CBA22970.1| putative phosphosugar isomerase [Erwinia amylovora CFBP1430]
 gi|312173707|emb|CBX81961.1| putative phosphosugar isomerase [Erwinia amylovora ATCC BAA-2158]
          Length = 321

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 130/324 (40%), Positives = 191/324 (58%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L + L       F  A E ++A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIATELSGAMNLAARL----DDHFVQACEMMRACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GKKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T +  S +A  AD V+ +  + E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGKPTSPLAMAADQVINIHTDREACPLGLAPTSSAVNTLIMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT    C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDIMRKGEKLPRITRDVTVGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+   L G+ T+GD+ R  HK  N  + +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DDAGVLIGVFTDGDLRRWLHKGENIQAGISRVMTVGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD+  +  G ++  D+   GI
Sbjct: 297 APVVDEQGRVTGAINLHDIHDAGI 320


>gi|148244323|ref|YP_001219017.1| polysialic acid capsule expression protein [Candidatus
           Vesicomyosocius okutanii HA]
 gi|146326150|dbj|BAF61293.1| polysialic acid capsule expression protein [Candidatus
           Vesicomyosocius okutanii HA]
          Length = 326

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 129/326 (39%), Positives = 200/326 (61%), Gaps = 8/326 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M NS +Q A   I+ E + ++ L  SL       F  A + I+   G+VV+ G+GKSGHI
Sbjct: 6   MSNSLLQSAKNVILTEAKAVTMLADSLDQ----NFIDACQLIQNCTGKVVLIGMGKSGHI 61

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            SK+A+TLASTGTP+F VH  EA HGDLGMIT++D++I +S+SG SDE+  ++   +   
Sbjct: 62  ASKIAATLASTGTPAFAVHPGEAGHGDLGMITQEDVVITISYSGESDEIMTLIPIIKHLG 121

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +I +T    S ++  +D+ L +  E E+CPH LAPT+S  + L +GDALAI+LL ++ 
Sbjct: 122 VFIIGMTGNVNSSISKISDVHLDVNVEKEACPHNLAPTSSTTVALVMGDALAISLLTNKG 181

Query: 199 FSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FS +DF   HP G LG   +   S +M +G+ IP+V     L++A+ ++S+K  G V + 
Sbjct: 182 FSVDDFARSHPSGALGRRLLTFVSTIMKTGNDIPMVSADIKLLNALLVMSQKTLGMVLIT 241

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D    LKGI T+GD+ R    H ++ TL++ +VM  N + I  D     A+Q++ + N++
Sbjct: 242 D-NNTLKGIFTDGDLRRVLETHPNIQTLTIGEVMTHNCQSISADKPAIAAVQMMDKFNLN 300

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L VVDD  + +G ++   L++  II
Sbjct: 301 SLPVVDDNNQILGAINTHTLMQAKII 326


>gi|89256726|ref|YP_514088.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica LVS]
 gi|167010920|ref|ZP_02275851.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC200]
 gi|187931753|ref|YP_001891738.1| phosphosugar isomerase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|224456981|ref|ZP_03665454.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|254368031|ref|ZP_04984051.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica 257]
 gi|89144557|emb|CAJ79872.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica LVS]
 gi|134253841|gb|EBA52935.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica 257]
 gi|187712662|gb|ACD30959.1| phosphosugar isomerase [Francisella tularensis subsp. mediasiatica
           FSC147]
 gi|282159084|gb|ADA78475.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis NE061598]
          Length = 323

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      K RV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKSRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNGHNILGIVTMHDLIKL 320


>gi|16273565|ref|NP_439820.1| KpsF [Haemophilus influenzae Rd KW20]
 gi|260581271|ref|ZP_05849089.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae RdAW]
 gi|1176843|sp|P45313|Y1678_HAEIN RecName: Full=Probable phosphosugar isomerase HI_1678
 gi|1574530|gb|AAC23324.1| kpsF protein (kpsF) [Haemophilus influenzae Rd KW20]
 gi|260092098|gb|EEW76043.1| polysialic acid capsule expression protein kpsF [Haemophilus
           influenzae RdAW]
          Length = 337

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 125/335 (37%), Positives = 190/335 (56%), Gaps = 11/335 (3%)

Query: 3   FYFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +F     +T    +L+  + + ++ A  S+  E   L  L   L  +    F+  ++ I
Sbjct: 7   VFFYDSAKITPISTALLGRRMNYLKIAQDSLSVESNALLQLSQRLGDD----FNQVIDLI 62

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+
Sbjct: 63  LACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISY 122

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA+
Sbjct: 123 SGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSAL 182

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           + LA+GDALA++L+ +RNF   DF   HPGG LG   +C             +       
Sbjct: 183 VTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           D +T+++E R G   V+ E ++LKGIIT+GDI R    +       + +D M  +PK I 
Sbjct: 242 DCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGAGTLNKTAKDFMTSSPKTIH 300

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 301 QDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|259907260|ref|YP_002647616.1| KpsF/GutQ family protein [Erwinia pyrifoliae Ep1/96]
 gi|224962882|emb|CAX54363.1| KpsF/GutQ family protein [Erwinia pyrifoliae Ep1/96]
 gi|283477072|emb|CAY72967.1| putative phosphosugar isomerase [Erwinia pyrifoliae DSM 12163]
          Length = 321

 Score =  323 bits (828), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 129/324 (39%), Positives = 187/324 (57%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L + L       F  A E + A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIETELSGAINLAARL----DDHFVQACEMMLACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD V+ +  + E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGNPASPLGTAADHVINIHTDREACPLGLAPTSSAVNTLMMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT    C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDMMRKGEKLPRITSDVTIGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D    L G+ T+GD+ R  HK  N  + +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DNAGVLAGVFTDGDLRRWLHKGGNIQAGISRVMTAGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD+  +  G ++  D+   GI
Sbjct: 297 APVVDEQGRVTGAINMHDIHDAGI 320


>gi|251770943|gb|EES51528.1| Sugar isomerase, KpsF/GutQ family protein [Leptospirillum
           ferrodiazotrophum]
          Length = 333

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 118/325 (36%), Positives = 177/325 (54%), Gaps = 11/325 (3%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V+ A R +  E + +  L   +       F  AV  I    G++ +TGIGKSGHI  K++
Sbjct: 13  VETARRVLEEESQAIRDLLPRIDS----SFAEAVGAILDNPGKLAVTGIGKSGHIARKVS 68

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T +STGTP+FF+H  EA HGDLGM+   D+++  S SG ++E+ A+L    R  +P+IA
Sbjct: 69  ATFSSTGTPAFFLHPGEALHGDLGMLESRDILLAFSKSGETEEILALLPLLGRMEVPVIA 128

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           I     S +A  A   L+     ES P G+APT+S    LA+GDALA+ +L  R+F   D
Sbjct: 129 IVGNKASTIAKKATWALSAEVSHESGPLGIAPTSSTTAMLAMGDALAMTVLSERDFGIPD 188

Query: 204 FYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F  LHPGG LG  +      +MH+GD IP V    PL + I  ++ K+ G   V+D    
Sbjct: 189 FASLHPGGSLGRRYFLQIGALMHTGDRIPRVAPETPLREVIVEMTAKKLGMTTVLDAKGA 248

Query: 263 LKGIITEGDIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           L GI+T+GD+ R   +       +  +  + VM   P  +   TL + A+ L+    I+ 
Sbjct: 249 LMGILTDGDLRRALDRRGSSAPSILDIPAQTVMTTTPVTLDPSTLASDALTLMESRQITS 308

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++VV   +   G++H  DLLR G++
Sbjct: 309 VVVVHPDRTVAGVLHIHDLLRAGVL 333


>gi|319955818|ref|YP_004167081.1| kpsf/gutq family protein [Nitratifractor salsuginis DSM 16511]
 gi|319418222|gb|ADV45332.1| KpsF/GutQ family protein [Nitratifractor salsuginis DSM 16511]
          Length = 331

 Score =  323 bits (827), Expect = 3e-86,   Method: Composition-based stats.
 Identities = 128/329 (38%), Positives = 196/329 (59%), Gaps = 8/329 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
            +     S V+ A  ++  E + L S    +       F  AVE I A+KG++++TGIGK
Sbjct: 3   SNRPDTQSLVESARETLQIEAQALLSATDRIDT----AFVEAVESIYALKGKLIVTGIGK 58

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG +G+K+A+TLASTGT SFF+H +EA HGDLGMI  +D ++ +S+SG S+EL  IL + 
Sbjct: 59  SGLVGAKIAATLASTGTSSFFLHPSEALHGDLGMIGPEDGVLAISYSGESEELSNILPHI 118

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           RRF IPL+A+T+   S +A +AD VL +  E E+CP G APT S  + +A+GDALA+AL+
Sbjct: 119 RRFGIPLLAMTAGKSSTLARYADTVLDISVEREACPLGAAPTASTTLTMALGDALAVALM 178

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + RNF + DF   HPGG LG         +   + +P+V+   PL +AI  +SE + G V
Sbjct: 179 KKRNFKKEDFASFHPGGSLGRRLFVKVADLMRREDLPIVEAQTPLKEAIVTMSEGKLGNV 238

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDT-LLTVAMQLLRQ 311
            +  E  +L+ I+++GD+ R   +    +   V D     PK I + + L + A+ L+  
Sbjct: 239 LITRE-GRLEAIMSDGDLRRALMRTDFDMERPVIDYATPGPKAIRDTSLLASDALALIEA 297

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + +L V+D+  +  G++H  DL+  GI
Sbjct: 298 AKVQLLPVLDEEDRIHGVIHLHDLVSAGI 326


>gi|319776077|ref|YP_004138565.1| phosphosugar isomerase [Haemophilus influenzae F3047]
 gi|317450668|emb|CBY86888.1| probable phosphosugar isomerase [Haemophilus influenzae F3047]
          Length = 311

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 125/314 (39%), Positives = 180/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  S+  E   L  L   L       F+  V+ I A KGR+VI GIGKSG IG K
Sbjct: 2   NYLQIAQNSLSVESNALLQLSQRL----GEDFNQVVDLILACKGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D+   ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPVDIVMLISYSGETDDANKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 EDFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|290953311|ref|ZP_06557932.1| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica URFT1]
 gi|295313463|ref|ZP_06804062.1| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica URFT1]
          Length = 323

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      K RV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKSRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS+ DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSKKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNGHNILGIVTMHDLIKL 320


>gi|309750746|gb|ADO80730.1| Arabinose-5-phosphate isomerase [Haemophilus influenzae R2866]
          Length = 337

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 125/335 (37%), Positives = 189/335 (56%), Gaps = 11/335 (3%)

Query: 3   FYFSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +F     +T    +L+  K + ++ A  S+  E   L  L   L       F+  ++ I
Sbjct: 7   VFFYDSAKITPISTALLGRKMNYLKIAQDSLSVESNALLQLSQRL----GEDFNQVIDLI 62

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A +GR+VI GIGKSG IG K+ +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+
Sbjct: 63  LACEGRLVIGGIGKSGLIGKKMVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISY 122

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E CP+ LAPTTSA+
Sbjct: 123 SGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSAL 182

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
           + LA+GDALA++L+ +RNF   DF   HPGG LG   +C             +       
Sbjct: 183 VTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFT 241

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVIL 297
           D +T+++E R G   V+ E ++LKGIIT+GDI R    +       + +D M  +PK I 
Sbjct: 242 DCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGVETLNKTAKDFMTSSPKTIH 300

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           ++  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 301 QEEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 335


>gi|119356240|ref|YP_910884.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353589|gb|ABL64460.1| KpsF/GutQ family protein [Chlorobium phaeobacteroides DSM 266]
          Length = 326

 Score =  323 bits (827), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 119/322 (36%), Positives = 194/322 (60%), Gaps = 7/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +      +  E + +  +   L       F  A+  I + KG+++++G+GKSG IG K
Sbjct: 9   AIIDSGKNILEQEAQAIHRIADRL----DDNFARAIALILSCKGKIIVSGMGKSGIIGQK 64

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGT + F+H A+A+HGDLG++   D++I LS SG+++EL  I+   ++    +
Sbjct: 65  IAATMASTGTTALFLHPADAAHGDLGIVCSGDIVICLSKSGTTEELNYIIPALKKTGASI 124

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T  ++S +A  ADIVL    E E+CP+ LAPTTS    LA+GDAL++ L++++NF+ 
Sbjct: 125 IALTGNSRSYLAKSADIVLDTGIEQEACPYDLAPTTSTTAMLAMGDALSMTLMQAKNFTP 184

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG    +  SD+M SGD++P+V     + D I  ++ KR+G  A++++ 
Sbjct: 185 VDFALTHPKGSLGRRLTMKVSDIMASGDTMPVVNEDAAVTDLILEMTSKRYGVSAIINKK 244

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L GI T+GD+ R   K  D   L+   VM  NPK +  + L T  +++L  + I+ L+
Sbjct: 245 GVLTGIFTDGDLRRLVQKGDDFLNLTARSVMTANPKTVGAERLATECLEILETYRITQLI 304

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V D  Q+  GI+H  DL+  G+
Sbjct: 305 VCDIDQRPAGIIHIHDLISLGL 326


>gi|254374617|ref|ZP_04990098.1| arabinose phosphate isomerase [Francisella novicida GA99-3548]
 gi|151572336|gb|EDN37990.1| arabinose phosphate isomerase [Francisella novicida GA99-3548]
          Length = 327

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 195/324 (60%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 6   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKGRVIITGMGKSGH 61

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 62  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHL 121

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 122 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 181

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 182 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 241

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 242 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 300

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +G+V   DL++ 
Sbjct: 301 TSLAVVDNDHSILGMVTMHDLIKL 324


>gi|261868047|ref|YP_003255969.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261413379|gb|ACX82750.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 311

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 125/314 (39%), Positives = 184/314 (58%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A  ++  E+  L  L+  L G     F   V  I   KGR+VI GIGKSG +G K
Sbjct: 2   DYLHIAQETLGVEENALGQLKQRLDGT----FADVVNLILNCKGRLVIGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   DL++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDLVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTS I+ +A+GDALA+ L+ +R+F  
Sbjct: 118 IALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSVIVTMALGDALAVCLVRARDFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+  +     D +TI++E R G   V+ E Q
Sbjct: 178 EDFAKFHPGGSLGRCLLCRVKDQMQTH-LPIAALTTTFTDCLTIMNEGRMGVALVM-EQQ 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R    +       + +++M  +PK I +DT ++ A   ++ H I  L+
Sbjct: 236 QLRGIITDGDIRRALTANGAETLNKTAQELMTSHPKTIHQDTYISEAENYMKAHKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VVDD Q  +G+V F
Sbjct: 296 VVDDAQHVVGLVEF 309


>gi|319896886|ref|YP_004135081.1| phosphosugar isomerase [Haemophilus influenzae F3031]
 gi|317432390|emb|CBY80745.1| probable phosphosugar isomerase [Haemophilus influenzae F3031]
          Length = 311

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 124/314 (39%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L       F+  V+ I A KGR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRL----GEDFNQVVDLILACKGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 EDFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPNTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R       +    + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTVNGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|57238467|ref|YP_179598.1| arabinose-5-phosphate isomerase [Campylobacter jejuni RM1221]
 gi|57167271|gb|AAW36050.1| arabinose-5-phosphate isomerase [Campylobacter jejuni RM1221]
 gi|315058899|gb|ADT73228.1| Capsular polysaccharide export system protein KpsF [Campylobacter
           jejuni subsp. jejuni S3]
          Length = 315

 Score =  322 bits (826), Expect = 4e-86,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +   +DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           VV    K IGI+  
Sbjct: 296 VVSKENKIIGIIQL 309


>gi|149194802|ref|ZP_01871896.1| KpsF/GutQ [Caminibacter mediatlanticus TB-2]
 gi|149134961|gb|EDM23443.1| KpsF/GutQ [Caminibacter mediatlanticus TB-2]
          Length = 314

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 120/318 (37%), Positives = 195/318 (61%), Gaps = 11/318 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   +  E   L  L++ + G        AVE     KG++++TG+GKSG IGSK+A+
Sbjct: 5   KIAKEVLEIEANEL--LKADVSG-----IEKAVEIAYNTKGKLIVTGVGKSGLIGSKIAA 57

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  EA HGDLGMIT+DD ++ +S+SG S+EL  IL + +RF +PLIA+
Sbjct: 58  TLASTGTPSFFIHPTEALHGDLGMITKDDSVLAISYSGESEELIKILPHIKRFEVPLIAM 117

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A +AD ++ +  + E+CP  +APT+S  + LA+GDALA+ L++ RNF++ DF
Sbjct: 118 TGDKNSTLAKYADALINIHIDKEACPLNVAPTSSTTLTLAMGDALAVCLMKKRNFTKEDF 177

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +   ++ P+      L +AI  ++E + G +  + E  +++
Sbjct: 178 ASFHPGGSLGKKLFIKVKDLMK-ENFPIANKDDNLKEAIIKMTEGKLGHILFL-EDNRVR 235

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            I+++GD+ R    +   L     +   KNPK I +D L + A++ + ++ I +L VV++
Sbjct: 236 AILSDGDLRRAMMSEDFDLEKKAIEFATKNPKTIKKDILASDALKFMEENKIQLLPVVNE 295

Query: 323 CQKAIGIVHFLDLLRFGI 340
            ++ +G++H  DL+  GI
Sbjct: 296 KEEVLGVIHIHDLVEAGI 313


>gi|78484848|ref|YP_390773.1| KpsF/GutQ family protein [Thiomicrospira crunogena XCL-2]
 gi|78363134|gb|ABB41099.1| capsule expression protein [Thiomicrospira crunogena XCL-2]
          Length = 311

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 112/317 (35%), Positives = 176/317 (55%), Gaps = 12/317 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
            T+  A R    E   +  L++ L       F  +V+ I A +GRVVI G+GKSG IG K
Sbjct: 2   DTLTIAKRVFDIEAEAVYHLKTLL----DENFSQSVDAILATEGRVVICGMGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TLASTGTP FF+H  EA HGDLGM++  D+ I LS SG ++E+  ++ + +     +
Sbjct: 58  IMATLASTGTPCFFMHPGEAFHGDLGMVSPKDVFIALSNSGETEEVIKLIPFLKDNGNTI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T    S +A +++  L +    E+CPH LAPT+S    L +GDALA+AL+E R+F  
Sbjct: 118 ISMTGRPDSTLAKNSNFHLNIAVPQEACPHQLAPTSSTTATLVMGDALAVALMEKRDFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +         +++P V+    + D I  +++ R G   V     
Sbjct: 178 QDFARFHPGGSLGRKLLTRVKHEMKSENLPFVEKSASMKDVIHTMTDGRLGLCIV----N 233

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           + +GIIT+GD+ R   +D       +  D+M  +PK+I  +  L+ A +++ Q  I+ L+
Sbjct: 234 QGEGIITDGDLRRQMEEDPANFMQKTAGDIMGTHPKMIDSEARLSDAEEMMTQKKITSLL 293

Query: 319 VVDDCQKAIGIVHFLDL 335
           V D   + +G++   DL
Sbjct: 294 VSD-QNQVVGVIQIYDL 309


>gi|307748310|gb|ADN91580.1| Arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           M1]
          Length = 315

 Score =  322 bits (826), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 180/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           VV    K +GI+  
Sbjct: 296 VVSKENKVVGIIQL 309


>gi|163854758|ref|YP_001629056.1| NDP-sugar epimerase [Bordetella petrii DSM 12804]
 gi|163258486|emb|CAP40785.1| NDP-sugar epimerase [Bordetella petrii]
          Length = 329

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 132/323 (40%), Positives = 185/323 (57%), Gaps = 7/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A R++  E + ++ L + L       F   V+ + A +GRVV++GIGK+GHI  K
Sbjct: 11  AALESARRTLHIEAQAIADLSARL----DDSFARVVDMLLACRGRVVVSGIGKTGHIARK 66

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTP+FFVHAAEA HGDLGMITRDD++I +S SGS  EL  IL  ARR    L
Sbjct: 67  IAATLASTGTPAFFVHAAEAIHGDLGMITRDDVLIAISHSGSGQELLTILPAARRMGAGL 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +AIT    S +A  AD+ L      E+CP  LAPT S    LA+GDALA+A LE+R F  
Sbjct: 127 VAITGNPASELARLADLHLDTSVAQEACPLNLAPTASTTAALALGDALAVACLEARGFGP 186

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVM  G ++P V     L  A+  +S K  G   V+D  
Sbjct: 187 EDFARSHPGGTLGRRLLTHVRDVMRQGAALPTVSEQSALFPALEEMSAKGMGMTIVLDAA 246

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            K  GI T+GD+ R   +  D+  L+V   M + P+ I  D L   A + + +  ++ ++
Sbjct: 247 GKPTGIFTDGDLRRLIERHGDIRNLTVAQGMTRMPRSIGPDALAVEAARQMDEQRLNQML 306

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V+D     +G +H  DL+   ++
Sbjct: 307 VLDSDGALLGALHMHDLMAAKVV 329


>gi|32456004|ref|NP_862006.1| rb131 [Ruegeria sp. PR1b]
 gi|22726356|gb|AAN05152.1| RB131 [Ruegeria sp. PR1b]
          Length = 323

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 141/327 (43%), Positives = 201/327 (61%), Gaps = 6/327 (1%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              S+   +T+    R +  E   L  +  +L          AV  ++A++GRV+++G+G
Sbjct: 2   PTSSMTDAATLGEMSRVLTTEASALQQMAEAL----GVPHLEAVRILEAMQGRVIVSGVG 57

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG+K+A+TLASTGTP+ FVHA EASHGDLGM+T  D+ +V+S SG + EL  I+ Y
Sbjct: 58  KSGHIGNKIAATLASTGTPAQFVHATEASHGDLGMVTARDVCLVISNSGETRELADIITY 117

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +RRF IPLIAIT   +S +A  AD+ L LP  PE+C  G+APTTS    LAIGDALA+AL
Sbjct: 118 SRRFGIPLIAITRVAESTLAQQADVTLLLPDAPEACGIGVAPTTSTTATLAIGDALAVAL 177

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           +  R F   DF V HPGGKLG   +    +MH+G+++PLV    P+ +A+  ++ K FG 
Sbjct: 178 MARRGFQREDFQVFHPGGKLGAQLMLVDALMHAGEALPLVLPDTPMAEALLTMTAKGFGV 237

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             +++E  +L GIIT+GD+ RN    L   +   V  ++P+VI    L + A+  +    
Sbjct: 238 AGLIEED-RLAGIITDGDLRRNMT-GLMEKTAGAVATRDPQVIRSGALASEALHEMNSRK 295

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           IS L V+D     +G++H  D LR GI
Sbjct: 296 ISSLFVLDQDDHVVGLLHIHDCLRAGI 322


>gi|254373168|ref|ZP_04988657.1| phosphosugar isomerase [Francisella tularensis subsp. novicida
           GA99-3549]
 gi|151570895|gb|EDN36549.1| phosphosugar isomerase [Francisella novicida GA99-3549]
          Length = 323

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      KGRV+ITG+GKSGH
Sbjct: 2   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKGRVIITGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  ++   +  
Sbjct: 58  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLMPMIKHL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 118 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 178 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPSDNIRKAILEISDKGVGNTLV 237

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+ D+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 238 -AENNTLLGIFTDSDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 297 TSLAVVDNDHNILGIVTMHDLIKL 320


>gi|56707899|ref|YP_169795.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110670370|ref|YP_666927.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115315134|ref|YP_763857.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|254369585|ref|ZP_04985596.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254370390|ref|ZP_04986395.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|254874709|ref|ZP_05247419.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
 gi|56604391|emb|CAG45421.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis SCHU S4]
 gi|110320703|emb|CAL08804.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC198]
 gi|115130033|gb|ABI83220.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           holarctica OSU18]
 gi|151568633|gb|EDN34287.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           tularensis FSC033]
 gi|157122539|gb|EDO66674.1| arabinose phosphate isomerase [Francisella tularensis subsp.
           holarctica FSC022]
 gi|254840708|gb|EET19144.1| arabinose-5-phosphate isomerase [Francisella tularensis subsp.
           tularensis MA00-2987]
          Length = 327

 Score =  322 bits (825), Expect = 5e-86,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      K RV+ITG+GKSGH
Sbjct: 6   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKSRVIITGMGKSGH 61

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +  
Sbjct: 62  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHL 121

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 122 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 181

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 182 NFSEKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 241

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 242 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 300

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 301 TSLAVVDNGHNILGIVTMHDLIKL 324


>gi|225010695|ref|ZP_03701165.1| KpsF/GutQ family protein [Flavobacteria bacterium MS024-3C]
 gi|225005248|gb|EEG43200.1| KpsF/GutQ family protein [Flavobacteria bacterium MS024-3C]
          Length = 321

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 123/322 (38%), Positives = 189/322 (58%), Gaps = 8/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A+R+   E+  L ++   L       F  AV+ I    GRVVITGIGKS  I +K
Sbjct: 6   KILESAVRTFQIERDALDAIIPLLNT----AFEKAVQTILQSTGRVVITGIGKSAIIANK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T+ STGTP+ F+HAA+A HGDLG I   D +I +S SG++ E+K ++   +R   PL
Sbjct: 62  IVATMNSTGTPAIFMHAADAIHGDLGTIQNGDPVICISKSGNTPEIKVLVPLLKRGQNPL 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT    S +A HAD VL      E+CP+ LAPTTS   QL +GDA+AI LLE + F  
Sbjct: 122 IAITGNTDSFLAQHADFVLNTYVAKEACPNNLAPTTSTTAQLVMGDAIAICLLELKEFGS 181

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG         +   ++ P+V     + + I  +S+K  G  AVV EG 
Sbjct: 182 KDFAQYHPGGALGKKLYLRVSDLVKNNATPMVTPQTKVKEVIMEISKKLLGAAAVV-EGN 240

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            + G++T+GDI R  +K  ++  L  +D+M  +PK I ++ +   A++++++++I+ L+ 
Sbjct: 241 TIVGVVTDGDIRRMLNKHDNIAALCAKDIMSHSPKTISQEAMAVEALKIMQENHITQLLA 300

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           V    K +GIVH  +L++ G++
Sbjct: 301 V-HENKYVGIVHLHNLIQEGLL 321


>gi|86151994|ref|ZP_01070207.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315124881|ref|YP_004066885.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
 gi|85841102|gb|EAQ58351.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           260.94]
 gi|315018603|gb|ADT66696.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           ICDCCJ07001]
          Length = 315

 Score =  322 bits (825), Expect = 6e-86,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 183/314 (58%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ A+  +   KGR +I+G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAINLMLNTKGRCIISGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +A   DI L +  E E+CP  LAP +S    L +GDALA AL+++RNF  
Sbjct: 118 IVMCGKKNSTLAKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKARNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENK 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I   +
Sbjct: 237 KLVGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   +K +GI+  
Sbjct: 296 IVGKEEKVVGIIQL 309


>gi|169656677|ref|YP_001428952.2| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
 gi|164551745|gb|ABU61996.2| sugar isomerase family protein [Francisella tularensis subsp.
           holarctica FTNF002-00]
          Length = 327

 Score =  322 bits (825), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 194/324 (59%), Gaps = 11/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGH 77
            S +  A+ +   E   L  L++S+       F  A E I      K RV+ITG+GKSGH
Sbjct: 6   TSHINNAVETFRLEIETLEKLKNSI----DENFEKACEIILENNRDKSRVIITGMGKSGH 61

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FFVH  EA HGD GMIT++D++I +S SG+S E+  +L   +  
Sbjct: 62  IGKKMAATFASTGTPAFFVHPGEAGHGDFGMITKNDVLIAISNSGTSSEIMGLLPMIKHL 121

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IP+IAITS  KS++A ++++ L L  + E+CP  LAPT+S    L +GDALAIALL+++
Sbjct: 122 DIPIIAITSNPKSILARNSNVTLNLHVDKEACPLNLAPTSSTTATLVLGDALAIALLKAK 181

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS+ DF   HP G LG   +    ++M  G+ IP+VK    +  AI  +S+K  G   V
Sbjct: 182 NFSKKDFAFSHPNGALGRKLILKVENIMRKGNEIPIVKPTDNIRKAILEISDKGVGNTLV 241

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E   L GI T+GD+ R F  +      ++ +VM KNPK I ++ +   A++ + ++ I
Sbjct: 242 -AENNTLLGIFTDGDLRRMFEAESFNSQRAISEVMTKNPKSISKEEMAITALEKMEKYEI 300

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD+    +GIV   DL++ 
Sbjct: 301 TSLAVVDNGHNILGIVTMHDLIKL 324


>gi|293389941|ref|ZP_06634275.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290950475|gb|EFE00594.1| arabinose 5-phosphate isomerase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 311

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 123/314 (39%), Positives = 184/314 (58%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A  ++  E+  L  L+  L G     F   V  I   KGR+VI GIGKSG +G K
Sbjct: 2   DYLHIAQETLGVEENALGQLKQRLDGT----FADVVNLILNCKGRLVIGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTS I+ +A+GDALA+ L+ +R+F  
Sbjct: 118 IALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSVIVTMALGDALAVCLMRARDFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+  +     D ++I++E R G   V+ E Q
Sbjct: 178 EDFAKFHPGGSLGRRLLCRVKDQMQTH-LPIAALTTTFTDCLSIMNEGRMGVALVM-EQQ 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R    +       + +++M  +PK I +DT ++ A   ++ H I  L+
Sbjct: 236 QLRGIITDGDIRRALTANGAETLNKTAQELMTSHPKTIHQDTYISEAENYMKAHKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VVDD Q  +G+V F
Sbjct: 296 VVDDAQHVVGLVEF 309


>gi|218781285|ref|YP_002432603.1| KpsF/GutQ family protein [Desulfatibacillum alkenivorans AK-01]
 gi|218762669|gb|ACL05135.1| KpsF/GutQ family protein [Desulfatibacillum alkenivorans AK-01]
          Length = 327

 Score =  321 bits (824), Expect = 7e-86,   Method: Composition-based stats.
 Identities = 124/324 (38%), Positives = 183/324 (56%), Gaps = 7/324 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  +T++ A   +  E  G+  L   +       F   V+ I   KGRV++ GIGKSG +
Sbjct: 1   MGQTTIEQAKEVLKIEAEGVLELVEKI----DEGFSAMVDLIMDCKGRVIVGGIGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +TL STGT S F+H  EA HGDLGM+  DD+ + LS SG +DEL  ++   ++  
Sbjct: 57  GRKIVATLNSTGTRSMFLHPVEAMHGDLGMVCSDDIFLALSNSGETDELNILVPSIQKAG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA T    S +A ++DIV+ +  + E+CP GLAPT+S    LAIGDALA+ L+  RN
Sbjct: 117 CKVIAFTGNVNSTLAKYSDIVIDVGVKREACPLGLAPTSSTTALLAIGDALAVVLINKRN 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F  +DF   HPGG LG  L     D+M +GD +P V     + +AI  +     G   V 
Sbjct: 177 FKSSDFKRFHPGGHLGQRLSAKIKDIMLTGDDVPCVLEDTIMTEAIAEMDRLDLGTTLVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+   LKGIIT+GD+ R   +   ++  + +DVM   PK +   + ++ A+ L+  H I+
Sbjct: 237 DKDGALKGIITDGDLRRFLTRGNGVDRKTAKDVMTPTPKAVTSHSKVSEALNLMEAHLIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFG 339
           VL VV +  + +GI+H  D+L  G
Sbjct: 297 VLPVVGEKNQVLGILHVHDILGKG 320


>gi|310765249|gb|ADP10199.1| KpsF/GutQ family protein [Erwinia sp. Ejp617]
          Length = 321

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 128/324 (39%), Positives = 186/324 (57%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+   +Q A  +I  E  G  +L + L       F  A E + A +G+ +++GIGKSGHI
Sbjct: 1   MREKLLQAARETIETELSGAINLAARL----DDHFVQACEMMLACRGKAIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E   ++   +R  
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGFAAEFIRMVPMLKRLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD V+ +    E+CP GLAPT+SA+  L +GDALAIAL+ SRN
Sbjct: 117 VGIIAFTGNPASPLGTAADHVINIYTGREACPLGLAPTSSAVNTLMMGDALAIALMRSRN 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HPGG LGT    C  D+M  G+ +P +     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPGGSLGTRLLCCVGDMMRKGEKLPRITDDVTIGDALAELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D    L G+ T+GD+ R  HK  N  + +  VM    K +    L T A+ +  +  IS 
Sbjct: 237 DNAGVLVGVFTDGDLRRWLHKGGNIQAGIARVMTAGSKTLNAGQLATEALAMFHEQKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             V+D+  +  G ++  D+   GI
Sbjct: 297 APVIDEQGRVTGAINMHDIHDAGI 320


>gi|87120716|ref|ZP_01076609.1| KpsF/GutQ family protein [Marinomonas sp. MED121]
 gi|86163944|gb|EAQ65216.1| KpsF/GutQ family protein [Marinomonas sp. MED121]
          Length = 332

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 125/336 (37%), Positives = 191/336 (56%), Gaps = 11/336 (3%)

Query: 5   FSHFKSVTRK---GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
            +  K++T       +   +  +  A  ++  +   L+ L  S+  E    F  A++ I 
Sbjct: 1   MADTKAMTPSVGLSFNKTDSELLGSAQHTLTTQANALAKLADSITQE----FADAIKLIM 56

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +GR +I G+GKSG IG+K+A+TLASTGTPSFF+H  EA HGDLGM+   D +I++S+S
Sbjct: 57  KTQGRTIICGMGKSGLIGAKIAATLASTGTPSFFLHPGEAFHGDLGMVEPQDTLILISYS 116

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G ++EL  +L   + F    IA+   ++S +A H D VL +  + E+CP+ LAPTTS  M
Sbjct: 117 GETEELIRLLPSLKSFGNACIAMVGNSQSTLAKHCDCVLDISVDRETCPNNLAPTTSTTM 176

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             A+GDALA+AL+E R+F   DF   HPGG LG   +     +   D++P      PL +
Sbjct: 177 TTAMGDALAVALMECRDFKPQDFARFHPGGSLGRKLLTRVKDLMHKDNLPECHPDTPLKE 236

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILE 298
           AI +++  R G V V  +G  L GI T+GD+ R    D   +   ++  VM  +PK I +
Sbjct: 237 AIAVMTAGRMGMVLVK-QGDDLLGIFTDGDLRRAMLADAASMMDKTLSKVMTASPKTIHQ 295

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           DTL+  A + + Q  I++L+ VDD  K +G++   D
Sbjct: 296 DTLIVNAEEQMLQDKITLLIAVDDDNKVVGLLEIYD 331


>gi|332882725|ref|ZP_08450336.1| putative arabinose 5-phosphate isomerase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332679227|gb|EGJ52213.1| putative arabinose 5-phosphate isomerase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 320

 Score =  321 bits (824), Expect = 8e-86,   Method: Composition-based stats.
 Identities = 125/326 (38%), Positives = 189/326 (57%), Gaps = 8/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A ++I  E   ++ L   +  +    F  AV+ I   KGRVVITGIGKS  
Sbjct: 1   MKTEDIINIARQTITEEAAAVAKLTDYIDDD----FTQAVDYILHSKGRVVITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +T+ STGTP+ F+HAA+A HGDLG+I ++D++I +S SG++ E+K ++   +R 
Sbjct: 57  IANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQEDVVICISKSGNTPEIKVLVPLLKRG 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  LIAITS   SV+A  AD VL    E E+CP+ LAPTTS   QL +GDALA+ LLE +
Sbjct: 117 NNKLIAITSNKGSVLAQQADWVLYAHVEKEACPNNLAPTTSTTAQLVLGDALAVCLLEMK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F  +DF   HPGG LG         +   +  P V     +   I  +S K  G  AV+
Sbjct: 177 HFGSSDFAKYHPGGALGKRLYLKVSDIVVHNQKPEVSPDTDIKKVIVEISAKMLGVAAVI 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+G  + G++T+GDI R   K   +  L+ +D+M   PK I  D+L   A+ L+ ++ I+
Sbjct: 237 DQGN-IVGVVTDGDIRRMLSKTDTIKGLTAKDIMSVRPKTIDFDSLAIDALNLMEKNKIT 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V     K  GI+H  +L++ G++
Sbjct: 296 QLLVT-QDGKYAGIIHLHNLIQEGLL 320


>gi|332701277|ref|ZP_08421365.1| KpsF/GutQ family protein [Desulfovibrio africanus str. Walvis Bay]
 gi|332551426|gb|EGJ48470.1| KpsF/GutQ family protein [Desulfovibrio africanus str. Walvis Bay]
          Length = 330

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 125/322 (38%), Positives = 181/322 (56%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   +  A   +  E  GLS +   L       F  AVE + A  GRV+++G+GKSG +G
Sbjct: 7   KRDWLALAKEVLDIEIEGLSQVRDGL----DESFALAVEMLAACHGRVIVSGLGKSGLVG 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T++STGT + F+H  E +HGDLGMI   D+++ LS SG +DEL AI+   +    
Sbjct: 63  RKIAATMSSTGTAAAFLHPVEGAHGDLGMIRPGDVVLALSNSGETDELNAIVPSLKAMGA 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++AIT    S +   AD+V+      E+CP  LAPT S    LA+GDALA+ LL+ + F
Sbjct: 123 QVVAITGNRDSTLGRLADVVVQAKVAREACPLNLAPTASTTATLAVGDALAVCLLQCKPF 182

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF + HPGG LG         M    ++P+V  G  L  A+  L+  R G VAVVD 
Sbjct: 183 TEADFRMCHPGGALGQRLSRKVGDMMHTRNLPVVGAGSDLGAAMAELNRGRLGMVAVVDR 242

Query: 260 GQKLKGIITEGDIFR-NFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L+GI  +GD+ R      L+   +V +VM+K+PK +  +     AM ++  H I+VL
Sbjct: 243 QGRLQGIFVDGDVRRLAMSNGLDMHRAVAEVMVKSPKTLRPEGKAAEAMDIMEAHQITVL 302

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            VVDD    +G++H  DLL  G
Sbjct: 303 PVVDDTGVLLGMLHLHDLLGKG 324


>gi|295112279|emb|CBL29029.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Synergistetes bacterium SGP1]
          Length = 336

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 134/332 (40%), Positives = 187/332 (56%), Gaps = 9/332 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           R G        ++   R +  E   +      +  EL+     A   +    GRVV+ G+
Sbjct: 9   RPGERRSDQELLEAGRRLMRTEAAEILRAADRVGPELT----RAAHAVHECSGRVVVVGL 64

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGH+G K+++TLAS GTPSFF+HAAEASHGDLGM+ R+D+ + +S SG+S E+ A+L 
Sbjct: 65  GKSGHVGRKISATLASLGTPSFFLHAAEASHGDLGMVRREDVGLFISNSGTSMEIVALLP 124

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + RR    +IAIT   +S +A HADIVL    E E  P  LAP +S  +QLA+GDALA  
Sbjct: 125 HFRRLGAMMIAITGGLESPLAQHADIVLNSRVEKEGDPLQLAPMSSTTLQLALGDALAAM 184

Query: 193 LLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           +   R     DF + HPGG LG        DVM     +P V  G  + DA+  ++ K +
Sbjct: 185 VTLLRGLKREDFALFHPGGALGRRLLTRVRDVMGGPGQLPAVPCGVSVQDALFSITSKGY 244

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G   VVDE  +L GI T+GD+ R   +   D   + +ED M KNPK I  D L   AM++
Sbjct: 245 GATCVVDEDGRLCGIFTDGDLRRLIGRRGTDAFLVRIEDAMTKNPKGISPDALAAEAMRV 304

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +  ISVL V  +  + +G++H  DLL+ GI
Sbjct: 305 MEREEISVL-VALEDGRPVGMLHVHDLLKSGI 335


>gi|123441436|ref|YP_001005423.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088397|emb|CAL11188.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 321

 Score =  321 bits (823), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 179/324 (55%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +  A  ++  E          L   L   F  A E + A  G+ V++GIGKSGHI
Sbjct: 1   MTNPLLTYARETLEIELTE----AQRLLSRLDNNFVHACELLLACTGKAVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++LASTGTPSFFVH AEA HGDLGMI   D++I +S+SG + EL  IL       
Sbjct: 57  GKKIAASLASTGTPSFFVHPAEALHGDLGMIGSQDVLIFISYSGRAKELDLILPLLADSH 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+IA+T    S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R 
Sbjct: 117 IPVIAMTGGLASPLAQGAACVLDISVEHEACPMGLAPTSSAVNTLMMGDALAMALMRHRG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG LG  L      +M +GD +P+V     +++A+  LS    G VAV 
Sbjct: 177 FNAEDFARSHPGGSLGARLINRVHHLMRTGDRLPVVNESDSVMEAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISV 316
           D  QK+ G+ T+GD+ R   K           I  P   L +      A++ L QH+IS 
Sbjct: 237 DPNQKVVGVFTDGDLRRWLVKGGTLQQQLGGAITRPGFRLPEQWRAGEALEALHQHHISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD   K +G ++  DL + G+
Sbjct: 297 APVVDLDGKLVGAINLHDLHQAGV 320


>gi|205356122|ref|ZP_03222889.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205345965|gb|EDZ32601.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 315

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 113/317 (35%), Positives = 180/317 (56%), Gaps = 9/317 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NILEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+        D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIAHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLIGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHFLDL 335
           VV    K +GI+   ++
Sbjct: 296 VVSKEDKVVGIIQLYEI 312


>gi|154497302|ref|ZP_02035998.1| hypothetical protein BACCAP_01595 [Bacteroides capillosus ATCC
           29799]
 gi|150273701|gb|EDN00829.1| hypothetical protein BACCAP_01595 [Bacteroides capillosus ATCC
           29799]
          Length = 324

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 117/329 (35%), Positives = 183/329 (55%), Gaps = 9/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +   +  +  A R    E R L S+  SL       F   +E+I   +G+V+ITG+GK 
Sbjct: 1   MTEAASEALTSARRLFDTEIRALESVRDSLDQR----FLDILEQIVNCRGKVIITGMGKP 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG+K+A+T+AS GTP+F++H AEA HGDLGM+  DD+++ +S+SG SDE+  ++   +
Sbjct: 57  GHIGTKIAATMASLGTPAFYLHPAEALHGDLGMVGADDVVLAISYSGESDEVIRLIPSLK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                LI I+    S +   +D     P   E+C   LAPT+S    L +GDALA+   E
Sbjct: 117 LIGATLIGISGNADSTLIRFSDYSFVFPPFEEACHMHLAPTSSTTAALVLGDALAVCASE 176

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
              F+E +F + HP G LG  L V   D+MH  +   ++  G  L +AI  +S K  G +
Sbjct: 177 RYGFNEKNFALFHPAGALGKRLLVRTGDLMHKDEGNAVIHPGASLWEAIGEMSRKALGIL 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + D G KL+G+ T+GD+ R   +  D+    ++DVM ++P  +  D L   A++ + + 
Sbjct: 237 CIAD-GDKLEGVFTDGDLRRVMSRRVDIYGARIDDVMTRSPITVGPDVLAVEALREMNRR 295

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           NIS L V+D  ++ +G +   D+   GII
Sbjct: 296 NISALPVLD-GERLVGTIRINDITGAGII 323


>gi|157415669|ref|YP_001482925.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81116]
 gi|157386633|gb|ABV52948.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           81116]
          Length = 315

 Score =  321 bits (822), Expect = 1e-85,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L ++L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLATNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEEILKIIPAIKKREIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D I +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLIDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLIGIITDGDLRRALKASDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           VV    K +GI+  
Sbjct: 296 VVSKENKVVGIIQL 309


>gi|84501335|ref|ZP_00999540.1| Sugar phosphate Isomerase [Oceanicola batsensis HTCC2597]
 gi|84390626|gb|EAQ03114.1| Sugar phosphate Isomerase [Oceanicola batsensis HTCC2597]
          Length = 325

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 141/318 (44%), Positives = 189/318 (59%), Gaps = 6/318 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   + +E   L+ L   L  E    F   V  +  ++GRVVI+G+GKSGH+ +K+
Sbjct: 13  AIETARAVLRSESAALAQLADELTAE----FDSVVAALLPVQGRVVISGMGKSGHVAAKI 68

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T ASTGTP+ FVH  EASHGDLGMITR D  I++S SG + EL  I+ + RRF IPLI
Sbjct: 69  AATFASTGTPAQFVHPGEASHGDLGMITRADATILISNSGETKELADIIAHTRRFDIPLI 128

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            IT    S +A  AD VL L   PE+C  G+APTTS  M +A+GDALA+AL+E+R F   
Sbjct: 129 GITKRAGSALAKQADHVLLLSDAPEACSIGMAPTTSTTMTMALGDALAVALMEARGFDST 188

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF+  HPGG LG   +    VMH GD++P+V+    + D +  +S K FG VAV  E  +
Sbjct: 189 DFHTFHPGGTLGAQLLTVRAVMHQGDALPVVRPETGMGDTLLEMSAKGFGVVAVT-EAGR 247

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           L G+IT+GD+ RN    L       V    P+ I  D LL  A+ ++  + IS L  VDD
Sbjct: 248 LTGVITDGDLRRNLE-GLLERKAGAVATGRPRTISADILLVEALGIMNDNKISALFAVDD 306

Query: 323 CQKAIGIVHFLDLLRFGI 340
                G+VH  D LR G+
Sbjct: 307 EGSLEGLVHIHDALRVGV 324


>gi|224369312|ref|YP_002603476.1| KdsD [Desulfobacterium autotrophicum HRM2]
 gi|223692029|gb|ACN15312.1| KdsD [Desulfobacterium autotrophicum HRM2]
          Length = 325

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 121/321 (37%), Positives = 180/321 (56%), Gaps = 8/321 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   +  E   +  L   +  E    F   V+ I + KGRV+I+GIGKSG IG K+
Sbjct: 2   IIEAAKEVLEKEAESILHLTKKIGPE----FEQMVKTILSSKGRVIISGIGKSGLIGKKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +TL STGT + F+H  EA HGDLGM+   D+ I +S SG + EL  +L   +     +I
Sbjct: 58  VATLTSTGTNAMFLHPVEAMHGDLGMVIEQDVFIAISNSGETGELNVLLPSIKALGCAMI 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A T    S +A   D+V+    E E+CP GLAPT S   QLA+GDALA+ L++ +NF E+
Sbjct: 118 AFTGNPGSTMAKLCDMVIDTGVEKEACPLGLAPTCSTTAQLAMGDALAVVLIKKKNFKES 177

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L     ++M+  D  P+V  G  +  AI ++ + + G V + D   
Sbjct: 178 DFKRSHPGGVLGQRLSCMVKEIMNHDDPPPVVARGTTITFAIGVMEQFKLGAVLITDTDN 237

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GIIT+GDI  +  +   D + + VEDVM  +P  I  ++ L  A+ ++ ++ I+ L 
Sbjct: 238 TLLGIITDGDIRHSIARGQFDFDHIVVEDVMSCDPFTIRPNSPLYDALNIMEKNEITALP 297

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           V D+ +K  GI+H  ++L  G
Sbjct: 298 VTDNSKKLCGILHLHEILGKG 318


>gi|283956817|ref|ZP_06374291.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           1336]
 gi|283791678|gb|EFC30473.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           1336]
          Length = 315

 Score =  320 bits (821), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   +K +GI+  
Sbjct: 296 IVGKEEKVVGIIQL 309


>gi|145220332|ref|YP_001131041.1| KpsF/GutQ family protein [Prosthecochloris vibrioformis DSM 265]
 gi|145206496|gb|ABP37539.1| KpsF/GutQ family protein [Chlorobium phaeovibrioides DSM 265]
          Length = 322

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 120/326 (36%), Positives = 200/326 (61%), Gaps = 7/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ ++     ++ E   +S +   L G     F  AV  + A KG+V+I+G+GKSG 
Sbjct: 1   MDSSTIIEKGRTVLLKEAAAISRMAERLDG----NFAEAVAALGACKGKVIISGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+T++STGT + F+H AEA+HGDLGM+ ++D++I LS SG+++EL  I+   R+ 
Sbjct: 57  VGQKMAATMSSTGTTAVFLHPAEAAHGDLGMVQQNDVVIGLSKSGTTEELNFIIPPLRQI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + +IA+T   +S +  +ADI L    E E+CP+ LAPTTS    LA+GDAL+IAL+E +
Sbjct: 117 GVTIIAMTGSVRSYLGENADITLDTGIEQEACPYDLAPTTSTTAMLAMGDALSIALMEEK 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F++ DF + HP G LG    +   ++M +G+++P+V+    + + I  ++ KR+G  AV
Sbjct: 177 SFTQRDFALSHPKGALGRRLTIKLKEIMATGEAVPIVRESDSMSEMILEMTSKRYGVSAV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD   +L GI T+GD+ R   +     +L+  +VM  NPK   +D L    +  L  + I
Sbjct: 237 VDSAGRLTGIFTDGDLRRLVQQGEEFLSLTAGEVMTPNPKTADDDMLAKECLDTLETYRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + LMV ++  + +G++H  DLL  G+
Sbjct: 297 TQLMVCNNQHQPVGLIHLHDLLALGL 322


>gi|149925780|ref|ZP_01914044.1| carbohydrate isomerase, KpsF/GutQ family protein [Limnobacter sp.
           MED105]
 gi|149825897|gb|EDM85105.1| carbohydrate isomerase, KpsF/GutQ family protein [Limnobacter sp.
           MED105]
          Length = 330

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 138/334 (41%), Positives = 196/334 (58%), Gaps = 7/334 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +++   +  K+  +  A  ++  E + +S+L   L      QF  A   I   KGRV++ 
Sbjct: 1   MSKTPSNNDKHDFLAMAREALAIEAQAVSALAERLND----QFSQATTAILNCKGRVILV 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG I  K+A+T ASTGTPSFFVHA EASHGDLGMIT+DD++I LS SG+++EL A+
Sbjct: 57  GVGKSGLIAKKIAATFASTGTPSFFVHATEASHGDLGMITQDDVVIALSNSGNTEELVAV 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L    R    ++A+T +  S +A  AD+VL    E E+CP  LAPT S    LA+GDALA
Sbjct: 117 LPAIARRGAKIVAMTGKLDSALARQADLVLDCGVEKEACPLNLAPTASTTAALALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           + +L++R FSE DF + HPGG LG       SDVM  GD IP V     +  AI  +++K
Sbjct: 177 VVVLKARGFSEEDFALSHPGGSLGRKLLTHVSDVMRKGDRIPTVSPSASISSAILEITKK 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             G  AVV    KL G+ T+GD+ R   +  DL  L V +VM   PK I  D L   A++
Sbjct: 237 GLGMTAVVGANNKLLGVFTDGDLRRLIEQGLDLRGLLVSEVMNTLPKCISPDKLAVEAVR 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++   +IS ++V D+    +G ++F DL    ++
Sbjct: 297 MMEVSHISQVVVTDEQGHIVGALNFHDLFEAKVV 330


>gi|114778210|ref|ZP_01453082.1| KpsF/GutQ family protein [Mariprofundus ferrooxydans PV-1]
 gi|114551457|gb|EAU54012.1| KpsF/GutQ family protein [Mariprofundus ferrooxydans PV-1]
          Length = 328

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 127/332 (38%), Positives = 185/332 (55%), Gaps = 7/332 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T +   + + + +  A + +  E   L +     +  L   F  AV  I  +KGR+V+ 
Sbjct: 1   MTTEEIHMKQQAWLDKARKVLDIEIAALQA----QRESLDDSFVQAVATILDLKGRLVVV 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG I  K+A+T ASTGTP+FFVHAAEA HGDLGMIT  D ++ LS SG + E+  +
Sbjct: 57  GMGKSGIIAKKIAATFASTGTPAFFVHAAEAQHGDLGMITGQDAVLALSHSGETAEVCGL 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   RR    +IA+T +  S +A +AD VL +  + E+CP  LAPT S    LA+GDALA
Sbjct: 117 LPEIRRRGAHVIAMTGDRSSTLARYADTVLHIDVQLEACPLNLAPTASTTATLALGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + +L+ R F E DF  +HP G LG   +   D+MH G  +P+V     L +AI  +S  R
Sbjct: 177 VVVLKERGFREEDFARVHPAGSLGRKLLRVQDIMHQGQELPMVARTASLREAIMEISAHR 236

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQL 308
            G   V D G  + G I++GD+ R        L   V  +M  NP  I    L + A++L
Sbjct: 237 LGITGVTD-GGDIIGCISDGDLRRILESGHMDLDAPVYTLMHPNPMCIDAGRLASEALRL 295

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++ + VL   D+  +  GI+H  D+L+ GI
Sbjct: 296 MEENKVLVLFARDEHGQVNGIIHMHDILQGGI 327


>gi|332162615|ref|YP_004299192.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666845|gb|ADZ43489.1| D-arabinose 5-phosphate isomerase [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
          Length = 321

 Score =  320 bits (820), Expect = 2e-85,   Method: Composition-based stats.
 Identities = 130/324 (40%), Positives = 181/324 (55%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +  A  ++  E          L   L   F  A E + A  G+ V++GIGKSGHI
Sbjct: 1   MTNPLLTYARETLEIELTE----AQRLLSRLDNNFVHACELLLACTGKAVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++LASTGTPSFFVH AEA HGDLGMI   D++I +S+SG + EL  IL       
Sbjct: 57  GKKIAASLASTGTPSFFVHPAEALHGDLGMIGSQDVLIFISYSGRAKELDLILPLLADSH 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+IAIT   +S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R 
Sbjct: 117 IPVIAITGGLESPLAQGAACVLDISVEHEACPMGLAPTSSAVNTLMMGDALAMALMRHRG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG LG  L      +M +GD +P+V     +++A+  LS    G VA+ 
Sbjct: 177 FNAEDFARSHPGGSLGARLINRVHHLMRTGDRLPVVNESDSVMEAMLELSRTGLGLVAIC 236

Query: 258 DEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  QK+ G+ T+GD+ R   K       +   + +    + E      A++ L QH+IS 
Sbjct: 237 DPNQKVVGVFTDGDLRRWLVKGGTLQQQLGGAITRPGFRLPEQWRAGEALEALHQHHISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD   K +G ++  DL + G+
Sbjct: 297 APVVDLDGKLVGAINLHDLHQAGV 320


>gi|120613412|ref|YP_973090.1| KpsF/GutQ family protein [Acidovorax citrulli AAC00-1]
 gi|120591876|gb|ABM35316.1| KpsF/GutQ family protein [Acidovorax citrulli AAC00-1]
          Length = 339

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 192/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              V+ A  +   E   LS+L + + G     F   V ++ A  GRVV+ G+GKSGH+G 
Sbjct: 20  ERAVRLARETFDTEAAALSALAARVGG----AFADVVRRVLATSGRVVVMGMGKSGHVGR 75

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL++ +S SG S EL  +L   RR  +P
Sbjct: 76  KIAATLASTGTPAFFVHPAEASHGDLGMVTTGDLVLAISNSGESGELTVLLPVLRRLGVP 135

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+A+T   +S +A HAD+VL    E E+CP  LAPTTS   QLA+GDALA+ALL++R F 
Sbjct: 136 LVAMTGGLESTLARHADLVLDCGVEREACPLNLAPTTSTTAQLAMGDALAVALLDARGFR 195

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG       SDVM SG  +P V       + +  +S KR G  A+ D 
Sbjct: 196 SEDFARSHPGGALGRKLLTHVSDVMRSGADVPRVPPEASFSELMREMSAKRLGASAITDA 255

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R      DL +++  +VM   P+ I  D L   A +++ +H I+ +
Sbjct: 256 QGRILGIFTDGDLRRRIEAGADLRSVTAGEVMHAGPRTIAPDALAADAAEMMERHAITSV 315

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V  +     G+VH  DL+R  +I
Sbjct: 316 LVASEGGVLAGVVHIGDLMRAKVI 339


>gi|318606715|emb|CBY28213.1| glucitol operon GutQ protein [Yersinia enterocolitica subsp.
           palearctica Y11]
          Length = 321

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 179/324 (55%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +  A  ++  E          L   L   F  A E + A  G+ V++GIGKSGHI
Sbjct: 1   MTNPLLTYARETLEIELTE----AQRLLSRLDNNFVHACELLLACTGKAVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++LASTGTPSFFVH AEA HGDLGMI   D++I +S+SG + EL  IL       
Sbjct: 57  GKKIAASLASTGTPSFFVHPAEALHGDLGMIGSQDVLIFISYSGRAKELDLILPLLADSH 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+IAIT    S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R 
Sbjct: 117 IPVIAITGGLASPLAQGAACVLDISVEHEACPMGLAPTSSAVNTLMMGDALAMALMRHRG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG LG  L      +M +GD +P+V     +++A+  LS    G VA+ 
Sbjct: 177 FNAEDFARSHPGGSLGARLINRVHHLMRTGDRLPVVNESDSVMEAMLELSRTGLGLVAIC 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISV 316
           D  QK+ G+ T+GD+ R   K           I  P   L +      A++ L QH+IS 
Sbjct: 237 DPNQKVVGVFTDGDLRRWLVKGGTLQQQLGGAITRPGFRLPEQWRAGEALEALHQHHISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD   K +G ++  DL + G+
Sbjct: 297 APVVDLDGKLVGAINLHDLHQAGV 320


>gi|308189284|ref|YP_003933414.1| sugar phosphate isomerase [Pantoea vagans C9-1]
 gi|308055899|gb|ADO08068.1| Predicted sugar phosphate isomerase [Pantoea vagans C9-1]
          Length = 320

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 124/324 (38%), Positives = 181/324 (55%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +  A  +I  E R      S L   L   F  A E+I A  G+V+++GIGKSGHI
Sbjct: 1   MKHVILDAARETIETELRE----ASRLTERLDEDFRQACERILACSGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMIT  D +I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMITAGDTVILISYSGYAAEFRRMVPLLKALP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++A T    S +   AD  + +    E+CP GLAPT+SA+  L +GDA+AIAL+++ N
Sbjct: 117 VGIVAFTGNPASPLGEAADHCINIHVNKEACPLGLAPTSSAVNTLIMGDAMAIALMQACN 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE D+   HP G LGT       D+M + + IPLV     + DA+  L+    G VA++
Sbjct: 177 FSEQDYARTHPAGNLGTRLLCRVGDIMRTDEKIPLVSTSATIHDALFELTRTGLGLVAII 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +E ++L GI T+GD+ R   K       V D M      +        A+ L ++  IS 
Sbjct: 237 NEDRRLSGIFTDGDLRRWLLKGGTLIAPVHDAMTSPGFTLSAGQYAAEALALFQKRKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VV D  +  G ++  D+   GI
Sbjct: 297 APVVSDTGEVKGAINAHDIRDAGI 320


>gi|283786745|ref|YP_003366610.1| D-arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
 gi|282950199|emb|CBG89835.1| D-arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
          Length = 321

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 185/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLLLELQE----ASRLPERLGDDFVRAANTIIHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPGSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE DF   HP G LG  L      +M   D++P V++   ++DA+  LS    G VAV 
Sbjct: 177 FSEEDFARSHPAGALGARLLNKVHHLMRRDDAVPQVQLSASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q++ G+ T+GD+ R        T  V + M +N   +  D+    A ++L +  I+ 
Sbjct: 237 DAQQQVNGVFTDGDLRRWLVGGGALTTPVSEAMTRNGITLQADSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GI+
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGIL 321


>gi|298209032|ref|YP_003717211.1| Sugar isomerase, KpsF/GutQ family protein [Croceibacter atlanticus
           HTCC2559]
 gi|83848959|gb|EAP86828.1| Sugar isomerase, KpsF/GutQ family protein [Croceibacter atlanticus
           HTCC2559]
          Length = 321

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 133/325 (40%), Positives = 187/325 (57%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++N  +  A  +I+ E + ++ LES L       F  AVE I   KGRV+ITGIGKS  I
Sbjct: 3   LQNKILSVAKDTILNEAKAVAHLESLL----DDSFSNAVECIYNSKGRVIITGIGKSAII 58

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +K+ +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+K ++   + F+
Sbjct: 59  ATKIVATLNSTGTPAIFMHAADAIHGDLGTILEDDVVICISKSGNTPEIKVLVPLIKNFN 118

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIAIT    S +   AD VL    E E+CP+ LAPTTS   QL IGDALA+ LL+ R 
Sbjct: 119 NKLIAITGNKDSFLGQQADYVLNAFVEKEACPNNLAPTTSTTAQLVIGDALAVCLLDLRG 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF   HPGG LG         +   +  P V +   +   I  +SEK  G  AV  
Sbjct: 179 FSSKDFAKYHPGGALGKKLYLRVSDITKANQKPEVSLTTDIKKVIVEISEKMLGVTAVT- 237

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  K+ GIIT+GD+ R   K  +   L+ +D+M ++PK I  D +   AM +L  + IS 
Sbjct: 238 KDNKIVGIITDGDLRRMLAKTDNFEALTAQDIMSESPKTIDNDAMAVDAMDVLETNGISQ 297

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L+  ++     G+VH  +L+R GII
Sbjct: 298 LL-AEENGTYSGVVHLHNLIREGII 321


>gi|261342148|ref|ZP_05970006.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
 gi|288315480|gb|EFC54418.1| arabinose 5-phosphate isomerase [Enterobacter cancerogenus ATCC
           35316]
          Length = 321

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 119/325 (36%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    ++++ E +      S L   L   F  A   +   +G+V++ GIGKSGHI
Sbjct: 1   MSDFLLNAGRQTLLLELQE----ASRLPERLGEDFVRAANTLIQCEGKVIVAGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SGS+ EL  I+   +  S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T + +S +A  A   L +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKPRSPLALAAKATLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M + ++ P V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRTDEATPQVTLDTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+G  +KG+ T+GD+ R           V D M      +  ++    A ++L +  I+ 
Sbjct: 237 DDGGFVKGVFTDGDLRRWLVGGGKLESQVSDAMTTGGLTLNAESRAIEAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVDD  +  G ++  D  + GII
Sbjct: 297 APVVDDSGRLCGAINLQDFYQAGII 321


>gi|329123240|ref|ZP_08251808.1| arabinose-5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
 gi|327471449|gb|EGF16897.1| arabinose-5-phosphate isomerase [Haemophilus aegyptius ATCC 11116]
          Length = 311

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 123/314 (39%), Positives = 177/314 (56%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  S+  E   L  L   L       F+  V  I A KGR+VI GIGKSG IG K
Sbjct: 2   NYLQIAQNSLSVESNALLQLSQRL----GEDFNQVVNLILACKGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTS ++ L +GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSVLVTLGLGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T ++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTHLPT-ILPTTNFTDCLTAMNEGRMGVALVM-ENK 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|309388533|gb|ADO76413.1| KpsF/GutQ family protein [Halanaerobium praevalens DSM 2228]
          Length = 332

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 128/336 (38%), Positives = 187/336 (55%), Gaps = 8/336 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
              +++          ++ A  ++  E   +  L++ L G     F  A+E I   +GRV
Sbjct: 1   MTKISKTKREEKLKVGLEDAKNTLQIEADAVLKLKAELDG----SFKKAMEMIIDAQGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V TG+GK+G +  KLA+T +STGT +FFVHA E  HGDLGMI   D++I +S SG +DE+
Sbjct: 57  VFTGVGKTGLVAKKLAATFSSTGTSAFFVHAGEGLHGDLGMIREGDVVIAVSNSGETDEV 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            ++L   RR  + LIA+T    S +A HAD+VL      E+CPH LAPT S    LA+GD
Sbjct: 117 ISLLPSLRRIGVKLIALTGNGSSTLAEHADLVLKADVVSEACPHNLAPTASTTAALALGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITIL 246
           ALAIAL     FS  DF + HPGG LG   +    DV+   +  P+V I   +  A+  +
Sbjct: 177 ALAIALSSYYGFSPEDFALFHPGGSLGRKLLTKVQDVIKIREQNPVVAIDATVRGALFKM 236

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           ++ + G  ++VD+   LKGIIT+GDI R   K  D     V+  M  +P  I  D L   
Sbjct: 237 TQSQMGSTSIVDQNGDLKGIITDGDIRRLLEKSSDFIEEPVKKYMTIDPISIAPDKLAAE 296

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A+Q++    I+ L VV++  K + +++F DLLR  +
Sbjct: 297 ALQIMEAKEINDLPVVENE-KPVAMLNFQDLLRAKV 331


>gi|300717164|ref|YP_003741967.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299063000|emb|CAX60120.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 320

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 122/324 (37%), Positives = 183/324 (56%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +  A  +I  E        + L   L  +F+ A  +I   +G+V+++GIGKSGHI
Sbjct: 1   MKDLILTAARETIETE----LHEAARLTERLDDEFYQACRRIHLCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+F+VH AEA HGDLGMI   D++I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATLASTGTPAFYVHPAEALHGDLGMIAAGDVVILISYSGYAAEFRLMVPLLKDLP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD  + +    E+CP GLAPT+SA+  L +GDA+AIAL+ +RN
Sbjct: 117 VSIIAFTGNPSSPLGEGADHCINIHVSKEACPLGLAPTSSAVNTLIMGDAMAIALMRARN 176

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE+D+   HP G LGT       ++M + + IP V     + DA+  L+    G VAV 
Sbjct: 177 FSEHDYARTHPAGSLGTRLLCRVENIMRTEERIPRVNQSATVHDALFELTRTGLGLVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            + +KL GI T+GD+ R   KD +    ++D M      +        A+ L +QH IS 
Sbjct: 237 ADDRKLAGIFTDGDLRRWLLKDGSLRAQIKDAMTSPGLSLSAGQHAVEALALFQQHKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             V  D  + IG ++  D+   GI
Sbjct: 297 APVTSDAGRVIGAINAHDIREAGI 320


>gi|329899109|ref|ZP_08272516.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC3088]
 gi|328920675|gb|EGG28155.1| Arabinose 5-phosphate isomerase [gamma proteobacterium IMCC3088]
          Length = 324

 Score =  319 bits (819), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 136/328 (41%), Positives = 193/328 (58%), Gaps = 8/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +L   + +  A R+   E   +++L   L      QF  A E + A  GR+++TG+GKS
Sbjct: 1   MTLDPTAALTAAKRTFKMEAEAVANLAQKLDQ----QFPKACELMLASTGRIIVTGMGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+A+TLASTGTP+ FVH  EASHGD+GMIT  D+++ LS SG++ E+  +L   +
Sbjct: 57  GHIARKIAATLASTGTPAHFVHPGEASHGDMGMITAQDVVVALSNSGTAVEILTLLPLLK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  +PLIA+T    S +A  +D  L    E E+CP  LAPT+S    L +GDALAIALLE
Sbjct: 117 RLGVPLIAMTGNPDSALALASDAHLDTGVETEACPLDLAPTSSTTTALVMGDALAIALLE 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF   HPGGKLG    +  +DVM  G +IP V     LIDA+  +S+K  G  
Sbjct: 177 ARGFTAEDFAFSHPGGKLGRKLLLKVADVMREGYAIPRVNSATKLIDALLEISQKGLGMT 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V+D+   L G+ T+GD+ R   K  D+ +  + +VM    K I  + L   A+ ++ Q+
Sbjct: 237 TVIDQDDVLLGLFTDGDLRRTLDKGLDVTSTPIREVMTTGAKTIGANHLAAEALNIMEQN 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            IS L VV +     G++H +DLLR GI
Sbjct: 297 KISAL-VVAEGNSVRGVIHLMDLLREGI 323


>gi|160877630|ref|ZP_02063067.1| KpsF protein [Campylobacter jejuni subsp. jejuni CG8486]
 gi|160694286|gb|EDP84474.1| KpsF protein [Campylobacter jejuni subsp. jejuni CG8486]
          Length = 315

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLITISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +   +DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   +K +GI+  
Sbjct: 296 IVGKEEKVVGIIQL 309


>gi|83955923|ref|ZP_00964434.1| Sugar phosphate Isomerase [Sulfitobacter sp. NAS-14.1]
 gi|83839687|gb|EAP78865.1| Sugar phosphate Isomerase [Sulfitobacter sp. NAS-14.1]
          Length = 323

 Score =  319 bits (818), Expect = 3e-85,   Method: Composition-based stats.
 Identities = 136/316 (43%), Positives = 197/316 (62%), Gaps = 6/316 (1%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A+R + AE   L ++  +L       F  +++ +   +GRV+++G+GKSGHI  K+A+T
Sbjct: 14  TAIRVLNAEADALRAMALALPR----GFENSIDLMAGARGRVIVSGMGKSGHIARKIAAT 69

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGTP+ F+H  EASHGDLGM+T DD+ ++LS SG + E+  ++ Y RRF IP+IAIT
Sbjct: 70  LASTGTPAMFLHPGEASHGDLGMVTVDDVCLLLSNSGETREMSDLIQYTRRFDIPMIAIT 129

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  +D+ L LP  PE+C  G+APTTS    LA+GDALAI ++E R F  + F+
Sbjct: 130 RVEDSTLARQSDVALILPDMPEACAIGMAPTTSTTCALALGDALAITMMEERGFMADSFH 189

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           V HPGGKLG  F+  SDVMHSGD++P+V     + + +  +S K FG  AV  E  +L G
Sbjct: 190 VFHPGGKLGAQFMRVSDVMHSGDNLPIVSPATTMGETLITMSAKGFGIAAV-AEDDRLYG 248

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +IT+GD+ RN    L       V   NP     + LL+ A+ L+ ++ I  +MVVD   +
Sbjct: 249 VITDGDLRRNLD-GLMDAFAGQVATPNPHTATPNMLLSEALGLMNRYKIGAIMVVDGNSR 307

Query: 326 AIGIVHFLDLLRFGII 341
             G++H  D LR G++
Sbjct: 308 LCGLLHIHDCLRAGVM 323


>gi|307320220|ref|ZP_07599639.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
 gi|306894099|gb|EFN24866.1| KpsF/GutQ family protein [Sinorhizobium meliloti AK83]
          Length = 329

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 228/325 (70%), Gaps = 2/325 (0%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++ +  +    R+I     G+++L + L+ +  L   F  A+E + + +GRVV+ G+GKS
Sbjct: 4   VVSDPILASISRTIATAADGINALAACLEDDAVLRRSFVDAIELVASKRGRVVVAGVGKS 63

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TLASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+
Sbjct: 64  GHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAK 123

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF++P+I++TS   S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE
Sbjct: 124 RFNVPVISVTSNADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLE 183

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R FS  DF   HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V 
Sbjct: 184 RRGFSAEDFKTFHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVG 243

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV    +L G+IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+
Sbjct: 244 VVGGDGELVGVITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKIT 303

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           VL +VDD  +  GI+H  DLLR G+
Sbjct: 304 VLFLVDDVGRPSGILHVHDLLRAGV 328


>gi|145637707|ref|ZP_01793360.1| KpsF [Haemophilus influenzae PittHH]
 gi|145269109|gb|EDK09059.1| KpsF [Haemophilus influenzae PittHH]
          Length = 311

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 122/314 (38%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L  +    F+  ++ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRLGDD----FNQVIDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLAHHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 EDFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAGTLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|218887396|ref|YP_002436717.1| KpsF/GutQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
 gi|218758350|gb|ACL09249.1| KpsF/GutQ family protein [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 333

 Score =  319 bits (818), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 120/322 (37%), Positives = 180/322 (55%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +      +  E  GL++L   L       F  A+  +   +GRVV+TG+GKSG +G
Sbjct: 10  RTDWIPLGRDVLDIEIEGLTALRDRL----GPSFEAALALLAGCRGRVVVTGLGKSGLVG 65

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+TL+STGTP+FF+H  E +HGD+G +  +D++I +S SG +DEL AIL   R    
Sbjct: 66  RKLAATLSSTGTPAFFLHPVEGAHGDMGSLRAEDVVIAISNSGETDELNAILPSLRAIGT 125

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+T + +S +   AD+VL      E+CPH LAPT S    LA+GDALA+ L+  ++F
Sbjct: 126 SIIAMTGKAQSTLGRAADVVLDSGVPREACPHNLAPTASTTAVLALGDALAVCLIHWKSF 185

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +ENDF   HPGG LG         +     IP+ +      +A+ +L +  FG VAVVD 
Sbjct: 186 TENDFLRYHPGGSLGQRLRLRVQELMHTTGIPVTQDDVGQEEAVRVLDKGGFGAVAVVDG 245

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L GI+T+GD+ R   +        V  +M  NP+    D  +   + ++ Q  I+VL
Sbjct: 246 SGRLMGILTDGDVRRAVIRGDYAPRTPVTAIMTCNPRSARSDQSVAELLDIMEQKAITVL 305

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            +VDD  + +G++H  DLL  G
Sbjct: 306 PIVDDAHRLLGLIHLHDLLGKG 327


>gi|307299858|ref|ZP_07579643.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
 gi|306904747|gb|EFN35330.1| KpsF/GutQ family protein [Sinorhizobium meliloti BL225C]
          Length = 329

 Score =  319 bits (817), Expect = 4e-85,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 226/325 (69%), Gaps = 2/325 (0%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++ +  +    R+I     G+++L   L+    L   F  A+E + + +GRVV+ G+GKS
Sbjct: 4   VVSDPILASISRTIATAADGINALAGRLEDNAALRRSFVDAIELVASKRGRVVVAGVGKS 63

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TLASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+
Sbjct: 64  GHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAK 123

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF++P+I++TS   S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE
Sbjct: 124 RFNVPVISVTSNADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLE 183

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R FS  DF   HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V 
Sbjct: 184 RRGFSAEDFKTFHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVG 243

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV    +L G+IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+
Sbjct: 244 VVGGDGELVGVITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKIT 303

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           VL +VDD  +  GI+H  DLLR G+
Sbjct: 304 VLFLVDDVGRPSGILHVHDLLRAGV 328


>gi|229845083|ref|ZP_04465219.1| probable phosphosugar isomerase [Haemophilus influenzae 6P18H1]
 gi|229812055|gb|EEP47748.1| probable phosphosugar isomerase [Haemophilus influenzae 6P18H1]
          Length = 311

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 124/314 (39%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L       F+  V+ I A KGR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLFVESNALLKLSHRL----GEDFNQVVDLILACKGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPNTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|283955047|ref|ZP_06372550.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793414|gb|EFC32180.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 315

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 112/314 (35%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    D+ L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKENSTLVKQGDVFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +   +++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVANNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKTNDKPRFDFKAKEIMSTNPKVVDVDAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   ++ +GI+  
Sbjct: 296 IVGKEERVVGIIQL 309


>gi|270264686|ref|ZP_06192951.1| hypothetical protein SOD_i01030 [Serratia odorifera 4Rx13]
 gi|270041369|gb|EFA14468.1| hypothetical protein SOD_i01030 [Serratia odorifera 4Rx13]
          Length = 323

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 128/322 (39%), Positives = 179/322 (55%), Gaps = 6/322 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A  ++  E          L   L   F CA E +   +G+ VI+GIGKSGHIG 
Sbjct: 5   TALLAFARETLEIELTE----AQRLLARLDDNFVCACELLLNCRGKAVISGIGKSGHIGK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A++LASTGTPSFFVH AEA HGDLGMI  DD+++ +S+SG + EL  IL      +IP
Sbjct: 61  KIAASLASTGTPSFFVHPAEALHGDLGMIGADDVVVFISYSGRAKELDLILPLLAENNIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAIT   +S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R F+
Sbjct: 121 VIAITGGKESPLALAAACVLDISVEREACPMGLAPTSSAVNTLMMGDALAMALMRQRGFN 180

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L      +M +GD +P V     +++A+  LS    G V V D 
Sbjct: 181 AEDFARSHPGGSLGARLLNRVHHLMRTGDRLPQVSENANVMEAMLELSRTGLGLVPVCDA 240

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLM 318
            QK+ G+ T+GD+ R   K  +        I  P   L +      A++ L + +IS   
Sbjct: 241 QQKVVGVFTDGDLRRWLVKGHSLQDALGQAITRPGYRLPEQWRAGEALEALHEQHISAAP 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VV+     +G ++  DL + GI
Sbjct: 301 VVNLDGVLVGAINLHDLHQAGI 322


>gi|153951764|ref|YP_001398733.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. doylei
           269.97]
 gi|152939210|gb|ABS43951.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. doylei
           269.97]
          Length = 315

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 180/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F  AV  I   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEIFEKEAQAIFDLAKNL----DENFSQAVNLILNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +   +DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKENSTLVKQSDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVNVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ ++ I   +
Sbjct: 237 KLVGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKYKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V    + +GI+  
Sbjct: 296 IVGKEARVVGIIQL 309


>gi|239818252|ref|YP_002947162.1| KpsF/GutQ family protein [Variovorax paradoxus S110]
 gi|239804829|gb|ACS21896.1| KpsF/GutQ family protein [Variovorax paradoxus S110]
          Length = 332

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 188/324 (58%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ +  A  +   E   +  L+S +       F  AV KI  ++GRVV+ G+GKSGH+G 
Sbjct: 13  DAILARARATFDIESDAVIGLKSRV----GPSFVEAVRKILDVRGRVVVMGMGKSGHVGR 68

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGMI   DL++ +S SG  DEL  IL   +R  +P
Sbjct: 69  KIAATLASTGTPAMFVHPAEASHGDLGMIKPVDLVLAISNSGEVDELTVILPVVKRQGVP 128

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T    S +A HADIV+      E+CP  LAPT S   Q+A+GDALA+ALL++R F 
Sbjct: 129 LIAMTGRTDSTLARHADIVIDAGVAKEACPLNLAPTASTTAQMAMGDALAVALLDARGFG 188

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG       SDVM SGD +P V     L + +  +S K  G  AVVD 
Sbjct: 189 SEDFARSHPGGALGRKLLTHVSDVMRSGDEVPRVAPTATLSELMREMSSKGLGATAVVDA 248

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  GI T+GD+ R      DL  L+  DVM   P+ +  + L   A +L+ +H I+ +
Sbjct: 249 QGRAIGIFTDGDLRRQVETGGDLRGLTAADVMHPGPRTLRAEALAVEAAELMEEHRITSV 308

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           ++VD     IG +   DL+R  +I
Sbjct: 309 LIVDPEGLLIGALSINDLMRAKVI 332


>gi|238763569|ref|ZP_04624530.1| hypothetical protein ykris0001_7840 [Yersinia kristensenii ATCC
           33638]
 gi|238698201|gb|EEP90957.1| hypothetical protein ykris0001_7840 [Yersinia kristensenii ATCC
           33638]
          Length = 317

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 128/319 (40%), Positives = 178/319 (55%), Gaps = 6/319 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A  ++  E          L   L   F  A E + A  G+ V++GIGKSGHIG K+A
Sbjct: 2   LTYARETLEIELTE----AQRLLSRLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIA 57

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ++LASTGTP+FFVH AEA HGDLGMI   D++I +S+SG + EL  IL       IP+IA
Sbjct: 58  ASLASTGTPAFFVHPAEALHGDLGMIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIA 117

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R F+  D
Sbjct: 118 ITGGLESPLALAAACVLDISVEHEACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAED 177

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L      +M +GD +P+V     +++A+  LS    G VAV D  Q+
Sbjct: 178 FARSHPGGSLGARLLNRVHHLMRTGDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPNQR 237

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVD 321
           + G+ T+GD+ R   K           I  P   L +      A++ L QH+IS   VV+
Sbjct: 238 VVGVFTDGDLRRWLVKGGTLQQPLGGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVN 297

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              K +G ++  DL + G+
Sbjct: 298 LDGKLVGAINLHDLHQAGV 316


>gi|78060502|ref|YP_367077.1| KpsF/GutQ [Burkholderia sp. 383]
 gi|77965052|gb|ABB06433.1| KpsF/GutQ [Burkholderia sp. 383]
          Length = 310

 Score =  319 bits (817), Expect = 5e-85,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 166/314 (52%), Gaps = 10/314 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ + ++ A +    E R L+ + + L       F  AVE I   +GRVV+ G+GKSG +
Sbjct: 1   MRQNHIESARQVFEIESRALAGVAARL----DANFDAAVETILGSRGRVVVCGMGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STGTP FF+H  EA HGDLGM+T DD  + +S SG +DE+  ++ + R   
Sbjct: 57  GRKIAATLSSTGTPGFFMHPGEAYHGDLGMVTPDDTFLAISNSGETDEVIKLIPFLRNNG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T    S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R 
Sbjct: 117 NDLIALTGNPSSTLASAARVHLDIGVEREACPLQLAPTASTTATLAMGDALAVTLMRARG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F    F   HPGG LG   +   D   +   +P V      +D +  ++  R G   V  
Sbjct: 177 FQPEHFARFHPGGSLGRRLLSTVDDEMACRDLPFVTEDTSTLDVLDAMTRGRLGLAIVKR 236

Query: 259 EGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +     GI+T+GD+ R   +    +   +  D+M   P  +   T +  A+ L++Q  I 
Sbjct: 237 DAG--WGIVTDGDVRRAIERHGDGVLRRTAADMMSIEPSTVPPGTRVEDALLLMQQQRIG 294

Query: 316 VLMVVDDCQKAIGI 329
            L+V D   + +G+
Sbjct: 295 ALLVSDGT-RIVGV 307


>gi|157148245|ref|YP_001455564.1| D-arabinose 5-phosphate isomerase [Citrobacter koseri ATCC BAA-895]
 gi|157085450|gb|ABV15128.1| hypothetical protein CKO_04062 [Citrobacter koseri ATCC BAA-895]
          Length = 321

 Score =  319 bits (817), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLLLELQE----ASRLPERLGDDFVRAANTILHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 ITLLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D++P V++   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAVPQVQLTTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  + +KG+ T+GD+ R           V + M  N   + E +    A +LL +  I+ 
Sbjct: 237 DAQRVVKGVFTDGDLRRWLVGGGTLATPVSEAMTHNGITLQEQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|326336565|ref|ZP_08202734.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 338
           str. F0234]
 gi|325691230|gb|EGD33200.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 338
           str. F0234]
          Length = 321

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 125/323 (38%), Positives = 182/323 (56%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +  A  +I  E   L  L + L       F  +VE I   KGRV+ITGIGKS  I  
Sbjct: 5   NKVLDFARETIDTELYSLKKLTNFL----DENFIKSVEVILHAKGRVIITGIGKSAIIAQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ STGTPS F+HAA+A HGDLG+I   D++I +S SG++ E+K ++   +R   P
Sbjct: 61  KIVATMNSTGTPSIFMHAADAIHGDLGIIQEGDVVICISKSGNTPEIKVLVPLLKREGNP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT+  +S +A  +D VL      E+CP+ LAPTTS   QL IGDAL++AL+  + F 
Sbjct: 121 LIAITANRESFLATQSDYVLYAYTHQEACPNNLAPTTSTTSQLVIGDALSVALMRMKQFG 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG           + + +P V     +   I  +S+K  G  AV+ EG
Sbjct: 181 SQDFAKYHPGGALGKRLYLTVGDAIAKNQVPAVAPDTDIKQVIVEISQKMLGVTAVL-EG 239

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           + + G+IT+GDI R     +D+  L  +D+M  +PK +    L   A+ L++ H I+ L+
Sbjct: 240 ETIVGVITDGDIRRMLSHYEDIKGLKAKDIMSLHPKTVEAGVLAVDALDLMQNHKITQLL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V       IG++H  +L++ GII
Sbjct: 300 VT-KEGHYIGVIHLHNLIQEGII 321


>gi|157371810|ref|YP_001479799.1| D-arabinose 5-phosphate isomerase [Serratia proteamaculans 568]
 gi|157323574|gb|ABV42671.1| KpsF/GutQ family protein [Serratia proteamaculans 568]
          Length = 323

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 130/326 (39%), Positives = 181/326 (55%), Gaps = 8/326 (2%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M NS   +  A  ++  E          L   L   F CA E +   +G+ VI+GIGKSG
Sbjct: 1   MSNSAALLAFARETLEIELAE----AQRLLARLDDNFVCACELLLNCRGKAVISGIGKSG 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+A++LASTGTPSFFVH AEA HGDLGMI  DD+++ +S+SG + EL  IL     
Sbjct: 57  HIGKKIAASLASTGTPSFFVHPAEALHGDLGMIGADDVVVFISYSGRAKELDLILPLLAE 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +IP+IAIT   +S +A  A  +L +  E E+CP GLAPT+SA+  L +GDALA+AL+  
Sbjct: 117 NNIPVIAITGGKESPLAQAAACMLDISVEREACPMGLAPTSSAVNTLMMGDALAMALMRQ 176

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F+  DF   HPGG LG  L      +M +GD +P V     +++A+  LS    G V 
Sbjct: 177 RGFNAEDFARSHPGGSLGARLLNRVHHLMRTGDRLPQVSESANVMEAMLELSRTGLGLVP 236

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT-LLTVAMQLLRQHNI 314
           V D  QK+ G+ T+GD+ R   K  +        I  P   L +      A++ L + +I
Sbjct: 237 VCDAQQKVVGVFTDGDLRRWLVKGNSLQDALSPAITRPGYRLPEQSRAGEALEALHEQHI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           S   VV+     +G ++  DL + GI
Sbjct: 297 SAAPVVNLEGVLVGAINLHDLHQAGI 322


>gi|189345877|ref|YP_001942406.1| KpsF/GutQ family protein [Chlorobium limicola DSM 245]
 gi|189340024|gb|ACD89427.1| KpsF/GutQ family protein [Chlorobium limicola DSM 245]
          Length = 326

 Score =  318 bits (816), Expect = 6e-85,   Method: Composition-based stats.
 Identities = 127/318 (39%), Positives = 190/318 (59%), Gaps = 7/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E   L  +   L       F  AV  + A  G+++I+G+GKSG I  K+A+T
Sbjct: 13  SGKTILEQEAGALRQIAERLDDT----FASAVTAMHACSGKIIISGMGKSGIIAQKIAAT 68

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           +ASTGT + F+H A+A+HGDLG+++  D++I LS SG+++EL  IL   RR  + +IA+T
Sbjct: 69  MASTGTTAMFLHPADAAHGDLGIVSEGDVVICLSKSGTTEELNFILPALRRIGVAIIALT 128

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +A +ADIVL    + E+CP  LAPT+S    LA+GDALAI L++++ F+  DF 
Sbjct: 129 GNPRSYLARNADIVLDTGIDQEACPFDLAPTSSTTAMLAMGDALAITLMQAKQFTPRDFA 188

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + HP G LG    + ASD+M SGD++P+V     L + I  ++ KR+G  A+VD   KL 
Sbjct: 189 LTHPKGALGRRLTMKASDIMASGDALPIVDDQAVLGELILEMTSKRYGVSAIVDRKGKLS 248

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R   K  +   LS   VM +NPK +  DTL    + +L    I+ LMV D+
Sbjct: 249 GIFTDGDLRRIVQKGGNFLQLSARSVMTENPKSVPPDTLAKECLDILETFRITQLMVCDN 308

Query: 323 CQKAIGIVHFLDLLRFGI 340
             + +GI+H  DL+  G+
Sbjct: 309 DNRPVGIIHIHDLITLGL 326


>gi|78187601|ref|YP_375644.1| KpsF/GutQ [Chlorobium luteolum DSM 273]
 gi|78167503|gb|ABB24601.1| KpsF/GutQ [Chlorobium luteolum DSM 273]
          Length = 326

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 126/324 (38%), Positives = 189/324 (58%), Gaps = 7/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  +   R ++ E   +  +   L G     F  AV  +   KG+++I+G+GKSG IG
Sbjct: 7   PDSLTEKGRRILLQEAEAILRMAERLDG----SFSSAVSLLAGCKGKIIISGMGKSGIIG 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T++STG+ + F+H AEA+HGDLG++ + D++I LS SG+++EL  I+   R+  +
Sbjct: 63  QKMAATMSSTGSTAVFLHPAEAAHGDLGIVQKHDVVIGLSKSGTTEELNFIIPPLRQIGV 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+T   +S +  +ADI L      E+CP+ LAPTTS    LA+GDALAIAL+E + F
Sbjct: 123 KIIAMTGSRRSFLGENADITLDTGIGTEACPYDLAPTTSTTAMLAMGDALAIALMEEKQF 182

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           ++ DF + HP G LG    V   D+M  GD++P+V     L D I  ++ KR+G  AVVD
Sbjct: 183 TQRDFALSHPKGALGRRLTVRVGDIMAKGDAVPVVHESSSLSDLILEMTSKRYGVSAVVD 242

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              +LKGI T+GD+ R   K     + +  DVM   PK    D L    + +L    I+ 
Sbjct: 243 SDGRLKGIFTDGDLRRLVQKGEEFLSRTAGDVMTAGPKTAGPDMLAKECLDILETWRITQ 302

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           LMV D   + IG++H  DLL  G+
Sbjct: 303 LMVCDALNRPIGLIHLHDLLTLGL 326


>gi|158522121|ref|YP_001529991.1| KpsF/GutQ family protein [Desulfococcus oleovorans Hxd3]
 gi|158510947|gb|ABW67914.1| KpsF/GutQ family protein [Desulfococcus oleovorans Hxd3]
          Length = 332

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 118/322 (36%), Positives = 186/322 (57%), Gaps = 7/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
               Q A+  +  E +G+  + ++L      QF  AV+ I   KGR+V++GIGKSG +G 
Sbjct: 8   TDITQQAIDVLKNEAKGILEVAANL----DHQFEKAVDLICRSKGRLVVSGIGKSGIVGQ 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGT + F+H  EA HGDLG++   D+ + LS SG ++EL  ++   R     
Sbjct: 64  KIVATLNSTGTRALFLHPVEAMHGDLGIVGPKDVFLGLSNSGETEELTGLIPTIRNVGCR 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA T    S +A  +DIV+ +  + E+CP GLAPTTS    +A+GDALA++L   ++F 
Sbjct: 124 VIAFTGNTHSSLARQSDIVINVGVKKEACPLGLAPTTSTTALMAMGDALAVSLSIRKDFK 183

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG       S++M +GD +P V +  P+ +A+ +L  +  G + VV +
Sbjct: 184 SSDFQRFHPGGSLGRRLALNVSEIMLTGDRVPAVPVKTPIEEALAVLDRQNLGALLVVRK 243

Query: 260 GQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              L GI+T+GD+ R +   + L+   V+ +M KNP  +  D+ +  A+ +L QH ++ L
Sbjct: 244 NNTLAGILTDGDLRRLYLAKEPLSGGPVDSIMTKNPLTVHPDSPVYDALNILEQHQVTAL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            V    +K  GI+H  D+L  G
Sbjct: 304 PVTAAGKKVCGILHLHDILGKG 325


>gi|167550324|ref|ZP_02344081.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
 gi|205324836|gb|EDZ12675.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA29]
          Length = 321

 Score =  318 bits (816), Expect = 7e-85,   Method: Composition-based stats.
 Identities = 125/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SGS+ EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A+++ R 
Sbjct: 117 VALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQERG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|145634482|ref|ZP_01790192.1| KpsF [Haemophilus influenzae PittAA]
 gi|145268462|gb|EDK08456.1| KpsF [Haemophilus influenzae PittAA]
          Length = 311

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 123/314 (39%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L  +    F+  V+ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRLGDD----FNQVVDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLAHHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|218682550|ref|ZP_03530151.1| putative arabinose 5-phosphate isomerase [Rhizobium etli CIAT 894]
          Length = 306

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 158/288 (54%), Positives = 217/288 (75%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + ++  +L++N  ++ A R+I  E+RGL +LE +    L+  F  AVE I  I GRV++T
Sbjct: 1   MNKRAVNLVENGVLESAKRTIETERRGLEALEQAFDDGLAGPFTRAVETIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + Y RRFSIPLIAIT  ++S +A  ADI+L +P E E+CP+GLAPTTS +MQLAIGDALA
Sbjct: 121 ISYTRRFSIPLIAITCSDRSSLASAADIILLVPNEQEACPNGLAPTTSTLMQLAIGDALA 180

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +ALLE+R F+  DF+V HPGGKLG   +  +D+MH+G+ +PLV  G P+ +A+T+LS K 
Sbjct: 181 VALLEARGFTATDFHVFHPGGKLGASLMHVADIMHTGERLPLVAKGTPMPEAVTVLSRKH 240

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           FGCV V+D   +L GI+TEGD+ RN  ++L  L+V+D+M K PK + +
Sbjct: 241 FGCVGVLDADGRLCGIVTEGDMARNLSRNLAELAVDDIMTKTPKTVKQ 288



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D+M    ++  + + T +  A+ +L + +   + V+D   +  GIV   D+ R
Sbjct: 210 VADIMHTGERLPLVAKGTPMPEAVTVLSRKHFGCVGVLDADGRLCGIVTEGDMAR 264


>gi|148827102|ref|YP_001291855.1| arabinose-5-phosphate isomerase [Haemophilus influenzae PittGG]
 gi|148718344|gb|ABQ99471.1| KpsF [Haemophilus influenzae PittGG]
          Length = 311

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 122/314 (38%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L  +    F+  ++ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRLGDD----FNQVIDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|86152774|ref|ZP_01070979.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|85843659|gb|EAQ60869.1| D-arabinose-5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni HB93-13]
          Length = 315

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 180/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NILEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTPEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIVVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLIGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   +K +GI+  
Sbjct: 296 IVGKEEKVVGIIQL 309


>gi|294102476|ref|YP_003554334.1| KpsF/GutQ family protein [Aminobacterium colombiense DSM 12261]
 gi|293617456|gb|ADE57610.1| KpsF/GutQ family protein [Aminobacterium colombiense DSM 12261]
          Length = 335

 Score =  318 bits (815), Expect = 8e-85,   Method: Composition-based stats.
 Identities = 133/333 (39%), Positives = 186/333 (55%), Gaps = 9/333 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            R G  L     +      +  E   L  +   +  E+      A   I   KGR+V+ G
Sbjct: 7   DRAGIDLDDERLLSIGRDVLKQEASELLRVADEMGQEI----VKAARVIHCSKGRLVVIG 62

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSG IG K+A+TLAS GTPSFF+HAAEASHGDLGM+ R+D+ + +S SG + E+ A+L
Sbjct: 63  MGKSGLIGRKIAATLASLGTPSFFLHAAEASHGDLGMVCREDVGLFISNSGKTKEVVALL 122

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
            + RR   P+I+IT    S +A ++DIVL      E+ P  LAPT+S  +QLAIGDALA 
Sbjct: 123 PFFRRLGAPVISITGGISSPLAKNSDIVLNSSVSREADPLNLAPTSSTTVQLAIGDALAG 182

Query: 192 ALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            + E R   E+DF + HPGG LG        DVM SGD +P+V     + DA+  ++ K 
Sbjct: 183 MVTELRGLEEDDFALFHPGGALGRRLLTKVEDVMGSGDKLPVVIEHVKVSDALFEMTSKG 242

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           +G   +VDE  KL GI T+GD+ R   +   +     V   M KNP  +    L   A+ 
Sbjct: 243 YGATLIVDEEGKLAGIFTDGDLRRLIERCGVECLESDVSSAMTKNPVTLEAGRLAAEAVH 302

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ +  ISVL+V     K IGI+H  +LL+ G+
Sbjct: 303 IMEEREISVLIVA-KAGKPIGIIHLHELLKAGV 334


>gi|332705753|ref|ZP_08425829.1| KpsF/GutQ family protein [Lyngbya majuscula 3L]
 gi|332355545|gb|EGJ35009.1| KpsF/GutQ family protein [Lyngbya majuscula 3L]
          Length = 327

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 119/330 (36%), Positives = 188/330 (56%), Gaps = 10/330 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ +     +  +  E   ++   + LQ +   +   AVE +   +G+VV+ G+GKSG +
Sbjct: 1   MEKTCFSQVVERLKIEADAITLAANRLQPQ---EVEQAVELLANCRGKVVLVGVGKSGIV 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL STGT + ++H  +A HGDLG +T  D+++ LS SG +DEL A++ Y +R  
Sbjct: 58  GRKIAATLTSTGTLATYLHPGDAMHGDLGSVTSSDVVVTLSNSGETDELVAVMPYLKRRQ 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+IAI     S +A +AD+VL    + E CP  LAPTTS  + LAIGDALA+ L+  + 
Sbjct: 118 LPIIAIVGNLNSTLARNADVVLDASVDQEVCPFNLAPTTSTTVALAIGDALAMTLMPLKG 177

Query: 199 FSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            +  DF + HP G+LG       +D+MH     P++      I+ +  +++   G V VV
Sbjct: 178 LTPEDFALNHPAGRLGKRLTLRVADLMHKDQDNPVISPQASWIEIVGAITKGSLGAVNVV 237

Query: 258 DEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH- 312
           D+  +L GIIT+GD+ R+  K    +L  L    +M  NP ++  D L   A+QL+    
Sbjct: 238 DDKGELFGIITDGDLRRSIAKIKPTELEHLKAVAIMTPNPVMVQPDQLAYDALQLMENRT 297

Query: 313 -NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ISVL VVD  ++ IG++   D+ + GI+
Sbjct: 298 SQISVLPVVDKHKRCIGLLRLHDIAQSGIL 327


>gi|256820492|ref|YP_003141771.1| KpsF/GutQ family protein [Capnocytophaga ochracea DSM 7271]
 gi|256582075|gb|ACU93210.1| KpsF/GutQ family protein [Capnocytophaga ochracea DSM 7271]
          Length = 320

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 125/326 (38%), Positives = 191/326 (58%), Gaps = 8/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A ++I  E + ++ L   +  +    F  ++E I   KGRVVITGIGKS  
Sbjct: 1   MKTEEIITIAKQTISEEAQAVAKLVDYIDDD----FTKSMEYILQSKGRVVITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +T+ STGTP+ F+HAA+A HGDLG+I +DD++I +S SG++ E+K ++   +R 
Sbjct: 57  IANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQDDVVICISKSGNTPEIKVLVPLLKRG 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  LIAITS   SV+A  AD VL    E E+CP+ LAPTTS   QL +GDALA+ LLE +
Sbjct: 117 NNKLIAITSNRNSVLAQQADSVLYAHVEKEACPNNLAPTTSTTAQLVLGDALAVCLLEMK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F  +DF   HPGG LG         +   +  P V     +   I  +SEK  G  AV+
Sbjct: 177 HFGSSDFAKYHPGGALGKRLYLKVADIVVHNQKPEVAPDTDIKKVIVEISEKMLGVAAVI 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D   ++ G++T+GDI R   K   +  L  +D+M  NPK I  ++L   A+ L+ ++ I+
Sbjct: 237 D-NGRIVGVVTDGDIRRMLSKTDSIKGLVAKDIMSANPKTIDLESLAIDALHLMEKNKIT 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V  +  +  GI+H  +L++ G+I
Sbjct: 296 QLLVTRE-GQYEGIIHLHNLIQEGLI 320


>gi|21673109|ref|NP_661174.1| carbohydrate isomerase KpsF/GutQ family protein [Chlorobium tepidum
           TLS]
 gi|21646183|gb|AAM71516.1| carbohydrate isomerase, KpsF/GutQ family [Chlorobium tepidum TLS]
          Length = 299

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 122/299 (40%), Positives = 179/299 (59%), Gaps = 3/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           +   L   F  A++ + A  G+++I+G+GKSG IG K+A+TL+STGT + F+H AEA+HG
Sbjct: 1   MSERLDENFSRAIDLMLACTGKIIISGMGKSGIIGQKIAATLSSTGTTAIFLHPAEAAHG 60

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG+++  D +I LS SG ++EL  IL   R     +IA T   +S +A +AD+VL    
Sbjct: 61  DLGVVSEGDTVICLSKSGMTEELNFILPALRERKATIIAFTGNPRSYLAMNADVVLDTGV 120

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDV 223
           E E+CP+ LAPT+S    LA+GDALAI L++ +NF++ +F + HP G LG    +   DV
Sbjct: 121 EQEACPYDLAPTSSTTAMLAMGDALAICLMKKKNFTDQEFALTHPKGSLGKQLTMRVGDV 180

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LN 281
           M +GD++P+V     L D I  ++ KR+G   VVD   KL GI T+GD+ R         
Sbjct: 181 MATGDALPVVSEDAMLSDLILEMTSKRYGVSGVVDAEGKLTGIFTDGDLRRLVQTGESFL 240

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                +VM  NPK +  D      ++LL  H I+ LMV D+ +  +GIVH  DL+  G+
Sbjct: 241 DKKAVEVMTPNPKTVAPDMKAKACLELLETHRITQLMVCDEKRCPVGIVHIHDLVTLGL 299


>gi|86131800|ref|ZP_01050397.1| sugar isomerase [Dokdonia donghaensis MED134]
 gi|85817622|gb|EAQ38796.1| sugar isomerase [Dokdonia donghaensis MED134]
          Length = 321

 Score =  318 bits (815), Expect = 9e-85,   Method: Composition-based stats.
 Identities = 133/323 (41%), Positives = 189/323 (58%), Gaps = 8/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               +  A ++I  E+  +++L S +  E    F  AV+ I + KGRVVITGIGKS  I 
Sbjct: 4   TQQIIASAQKTINIEQAAIANLSSLIDEE----FAQAVQAIYSSKGRVVITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+KA++   ++   
Sbjct: 60  QKIVATLNSTGTPALFMHAADAIHGDLGSILIDDIVICISKSGTTPEIKALVPLIKKTEN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIAITS   S +   AD VL    + E+CP+ LAPTTS   QL IGDA+A+ALL+ R F
Sbjct: 120 TLIAITSNKTSFLGNEADYVLHAFVKEEACPNNLAPTTSTTAQLVIGDAVAVALLDLRGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF   HPGG LG         + +    P V     + + I  +S+KR G  AVV  
Sbjct: 180 TEKDFAKYHPGGALGKRLYLTVQDICATHQNPAVTPDASIKEVIVEISKKRLGVTAVV-L 238

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              ++GIIT+GD+ R   K+  L  L+ + +M +NPK +    +   A  +L +HNIS L
Sbjct: 239 NGVIQGIITDGDLRRMLAKNDSLEGLTAQQIMSENPKTVNHTAMAIAAKDILEEHNISQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VV D     G+VH  DL++ GI
Sbjct: 299 LVVKDGNY-AGVVHIHDLIKEGI 320


>gi|307720119|ref|YP_003891259.1| KpsF/GutQ family protein [Sulfurimonas autotrophica DSM 16294]
 gi|306978212|gb|ADN08247.1| KpsF/GutQ family protein [Sulfurimonas autotrophica DSM 16294]
          Length = 320

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 126/326 (38%), Positives = 198/326 (60%), Gaps = 11/326 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A  ++  E   L +   ++  E    F  AVE I   KG++VI+G+GKSG I
Sbjct: 1   MNYKII--AQETLNIEAETLINAAKNIGDE----FDKAVEIILTCKGKLVISGVGKSGLI 54

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+T ASTGTPSFF+H  EA HGDLGMI +DD++I +S+SG S+EL +IL + +RF 
Sbjct: 55  GAKMAATFASTGTPSFFLHPTEALHGDLGMIGKDDVVIAISYSGESEELSSILPHIKRFG 114

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI +T +  S +  ++D+V+ +  E E+CP  +APT+S  + LA+GDALA+ L+ +R+
Sbjct: 115 IPLIGMTRDKNSTLGQYSDVVIDVIVEKEACPLNIAPTSSTTLTLALGDALAVCLMRARD 174

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F ++DF   HPGG LG         +   D +P++K    + DAI  +SE R G   + D
Sbjct: 175 FKKSDFASFHPGGALGKKLFVKVKNLMKTDDLPIIKEDAKVKDAILKISEGRVGTALIAD 234

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVM---IKNPKVI-LEDTLLTVAMQLLRQHNI 314
           +  KL G++++GD+ R   +   +L  ++VM    KNP  I  E+ L + A+ L+ +  I
Sbjct: 235 DEDKLVGLMSDGDVRRALMRQDFSLD-DNVMKYATKNPMSIDDEEMLASDALVLIEEKKI 293

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +L++ +  +K  G++H   L+  GI
Sbjct: 294 QLLVITNKEKKIEGVLHIHTLIEKGI 319


>gi|16761615|ref|NP_457232.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29143099|ref|NP_806441.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161615738|ref|YP_001589703.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|168235868|ref|ZP_02660926.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168242566|ref|ZP_02667498.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|194450477|ref|YP_002046798.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194735521|ref|YP_002115790.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197251720|ref|YP_002147735.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197263335|ref|ZP_03163409.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|200387219|ref|ZP_03213831.1| gutQ protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204928269|ref|ZP_03219469.1| gutQ protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|213051946|ref|ZP_03344824.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213426132|ref|ZP_03358882.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213621916|ref|ZP_03374699.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213648107|ref|ZP_03378160.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852360|ref|ZP_03381892.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|238909605|ref|ZP_04653442.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|25303285|pir||AB0845 probable phosphosugar binding protein STY2960 [imported] -
           Salmonella enterica subsp. enterica serovar Typhi
           (strain CT18)
 gi|16503916|emb|CAD05945.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29138732|gb|AAO70301.1| putative phosphosugar-binding protein [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|161365102|gb|ABX68870.1| hypothetical protein SPAB_03529 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194408781|gb|ACF69000.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL476]
 gi|194711023|gb|ACF90244.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. CVM19633]
 gi|197215423|gb|ACH52820.1| gutQ protein [Salmonella enterica subsp. enterica serovar Agona
           str. SL483]
 gi|197241590|gb|EDY24210.1| gutQ protein [Salmonella enterica subsp. enterica serovar Saintpaul
           str. SARA23]
 gi|197290765|gb|EDY30119.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|199604317|gb|EDZ02862.1| gutQ protein [Salmonella enterica subsp. enterica serovar Virchow
           str. SL491]
 gi|204322591|gb|EDZ07788.1| gutQ protein [Salmonella enterica subsp. enterica serovar Javiana
           str. GA_MM04042433]
 gi|205338210|gb|EDZ24974.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Heidelberg str. SL486]
 gi|322614343|gb|EFY11274.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322621592|gb|EFY18445.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322624453|gb|EFY21286.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322628784|gb|EFY25567.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322633489|gb|EFY30231.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635935|gb|EFY32643.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639643|gb|EFY36328.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322646826|gb|EFY43329.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322650594|gb|EFY46999.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654794|gb|EFY51113.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322659014|gb|EFY55267.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664419|gb|EFY60613.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322668332|gb|EFY64489.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673688|gb|EFY69789.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322677749|gb|EFY73812.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322681421|gb|EFY77453.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322683823|gb|EFY79833.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323193788|gb|EFZ78991.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323200258|gb|EFZ85340.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323203239|gb|EFZ88268.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323205514|gb|EFZ90479.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212802|gb|EFZ97613.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323216328|gb|EGA01055.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323221076|gb|EGA05507.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226897|gb|EGA11079.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323230819|gb|EGA14937.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323234830|gb|EGA18916.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323238869|gb|EGA22919.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323241569|gb|EGA25600.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248284|gb|EGA32220.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323251132|gb|EGA35005.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323263150|gb|EGA46688.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323264345|gb|EGA47851.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323271172|gb|EGA54600.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 321

 Score =  318 bits (815), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|85710298|ref|ZP_01041363.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Erythrobacter sp. NAP1]
 gi|85689008|gb|EAQ29012.1| CBS domain:Sugar isomerase (SIS):KpsF/GutQ family protein
           [Erythrobacter sp. NAP1]
          Length = 328

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 128/321 (39%), Positives = 193/321 (60%), Gaps = 1/321 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            + V  AL+++  E  GL  L+ +L    L   F  AV+   + KGR+++TGIGKSGHI 
Sbjct: 7   TTHVSSALKTLDIEIGGLKDLKRALSDSGLGNAFERAVDAFNSNKGRIIVTGIGKSGHIA 66

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T  STGT + ++H  EASHGDLG I+RDD++  ++WSG++ EL  I+ +    + 
Sbjct: 67  RKIAATFVSTGTSALYLHPGEASHGDLGTISRDDVVFAITWSGTTQELSDIVNFCGINNQ 126

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+  T+  +S +   ADI LTLP   E+CP+ LAPT+S  MQ+ +GDALA+AL+E+R F
Sbjct: 127 QLVVATAHPQSWIGKAADICLTLPMVREACPNELAPTSSTTMQMVLGDALAVALIEARGF 186

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  +F +LHPGG LG        VM +G+++P+V +   L  A   +S KR+GC A+VD+
Sbjct: 187 SPQNFGILHPGGLLGARLTTLEKVMATGEALPMVSLDATLRGATIEMSRKRYGCTAIVDQ 246

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G  T+GD+ R+   +    ++   M  NP       +   A+ L+    +SVL V
Sbjct: 247 DNRLVGAFTDGDLRRSIAANDLDDNIASHMSPNPVTASPKMMAVDALALMNDSAVSVLFV 306

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
            +   + +GIVH  DL+R GI
Sbjct: 307 TEQEDRLVGIVHMHDLVRLGI 327


>gi|168262050|ref|ZP_02684023.1| gutQ protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
 gi|168464038|ref|ZP_02697955.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|195633222|gb|EDX51636.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL317]
 gi|205349241|gb|EDZ35872.1| gutQ protein [Salmonella enterica subsp. enterica serovar Hadar
           str. RI_05P066]
          Length = 321

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPKRLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|224418004|ref|ZP_03656010.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|253827339|ref|ZP_04870224.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|313141547|ref|ZP_07803740.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
 gi|253510745|gb|EES89404.1| arabinose-5-phosphate isomerase [Helicobacter canadensis MIT
           98-5491]
 gi|313130578|gb|EFR48195.1| conserved hypothetical protein [Helicobacter canadensis MIT
           98-5491]
          Length = 313

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 116/312 (37%), Positives = 179/312 (57%), Gaps = 6/312 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
               Q A      E   +  L+  L  +    F+  +E I  +KG  VITG+GKSGHI +
Sbjct: 2   QDFTQVAKEVFDIESEAILGLKEHLNQD----FNGVIECILKLKGHCVITGMGKSGHIAA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGM+T++D +I +S SG S+E+  I+   ++ +IP
Sbjct: 58  KIAATLASTGTPSFFLHPGEALHGDLGMLTKEDAVIAISNSGESEEVLRIIPLIKKRAIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++   +S +A      L +  + E+CP  LAPT+S    LA+GDA+A+AL+++R F 
Sbjct: 118 LIVMSGNPQSTLAKEGQYFLNIAVKREACPLQLAPTSSTTANLAMGDAIAVALMKARGFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F + HPGG LG   +     +     +P+V       D I  ++ KR G   V+ E 
Sbjct: 178 PENFAMFHPGGSLGRKLLTQVKDIMVTQDLPIVSPQTSFKDLIAEMTSKRLGVCLVL-EN 236

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L+GIIT+GD+ R   ++   +  E++M K PKVI  + + T A  ++ +  I  L+V+
Sbjct: 237 HRLQGIITDGDLRRTLMENKFEVCAEEIMTKQPKVIQSNAMATQAEAIMMESKIKELVVM 296

Query: 321 DDCQKAIGIVHF 332
           D   + +GIV  
Sbjct: 297 D-GNEVVGIVQL 307


>gi|110598886|ref|ZP_01387137.1| KpsF/GutQ family protein [Chlorobium ferrooxidans DSM 13031]
 gi|110339499|gb|EAT58023.1| KpsF/GutQ family protein [Chlorobium ferrooxidans DSM 13031]
          Length = 326

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 123/319 (38%), Positives = 189/319 (59%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +I E R +  +   L       F  AVE + +  G+++I+G+GKSG IG K+A+
Sbjct: 12  ETGKSILIQEARAIQMMAERLDSR----FSGAVELLASCSGKIIISGMGKSGIIGQKIAA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T+ASTG+ + F+H A+A+HGDLG+++R D +I LS SG++DEL  IL   +   + +IA+
Sbjct: 68  TMASTGSTALFLHPADAAHGDLGIVSRGDAVICLSKSGTTDELNFILPALKEIGVSIIAM 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A +ADI+L    E E+CP+ LAPTTS    LA+GDALAIAL++ +NF++ DF
Sbjct: 128 TGNPRSFLAQNADIMLDTGIEKEACPYDLAPTTSTTAMLAMGDALAIALMQRKNFTQRDF 187

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HP G LG    V  S VM    ++P+V     + + I  ++ KR+G  AVV+E  +L
Sbjct: 188 ALTHPKGSLGRRLTVKVSSVMAKESAVPVVHEKASVTELILEMTSKRYGVSAVVNEDGRL 247

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T+GD+ R         + +   VM  NPK +   TL    + +L  + I+ LMV D
Sbjct: 248 TGIFTDGDLRRLVQNGTEFLSRTAGSVMTPNPKTVTTTTLAKECLDILETYRITQLMVCD 307

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              + +G+VH  DL+  G+
Sbjct: 308 REHRPVGLVHIHDLITLGL 326


>gi|46578577|ref|YP_009385.1| carbohydrate isomerase KpsF/GutQ family protein [Desulfovibrio
           vulgaris str. Hildenborough]
 gi|46447988|gb|AAS94644.1| carbohydrate isomerase, KpsF/GutQ family [Desulfovibrio vulgaris
           str. Hildenborough]
 gi|311232501|gb|ADP85355.1| KpsF/GutQ family protein [Desulfovibrio vulgaris RCH1]
          Length = 331

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/322 (36%), Positives = 179/322 (55%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +Q     +  E  G+ ++   L       F  A+  +   +GRVV+TG+GKSG +G
Sbjct: 8   QTDWLQRGRDVLDIEAEGIRAVRDRL----GPSFESALALLAGCRGRVVVTGLGKSGLVG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+T +STG+P+FF+H  E +HGD+G +  DD++I +S SG +DEL AIL   R    
Sbjct: 64  RKLAATFSSTGSPAFFLHPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGT 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T    S +   ADIVL      E+CP GLAPT S    LA+GDALA+ L++ ++F
Sbjct: 124 PIIALTGRADSSLGRGADIVLDCGVPREACPLGLAPTASTTAVLALGDALAVCLIDWKSF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +ENDF   HPGG LG         +   + IP+V       +A+  L +  FG VA+ D 
Sbjct: 184 TENDFLRYHPGGSLGQRLRLRVAELMHTEGIPVVNEEAVCEEAVLALDKGGFGAVALTDG 243

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G +L GI+T+GD+ R   +      V    +M +NP+   +   +   + ++ Q  I+VL
Sbjct: 244 GGRLTGILTDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            + DD  + +G+VH  DLL  G
Sbjct: 304 PITDDDHRLVGLVHLHDLLGKG 325


>gi|315638353|ref|ZP_07893532.1| arabinose 5-phosphate isomerase [Campylobacter upsaliensis JV21]
 gi|315481564|gb|EFU72189.1| arabinose 5-phosphate isomerase [Campylobacter upsaliensis JV21]
          Length = 316

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 120/315 (38%), Positives = 182/315 (57%), Gaps = 9/315 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             T++ A      E   + +L  +L       F  A+E I  IKGR +I+G+GKSGHIG+
Sbjct: 2   KETLKIAKEVFEIEAEAIRNLSENL----DHNFSKAIELILNIKGRCIISGMGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMIT +D++I +S SG ++EL  I+   +R  IP
Sbjct: 58  KIAATLASTGTPSFFMHPGEALHGDLGMITSEDVLIAISNSGETEELLKIIPAVKRRQIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA++   KS +A  A+I L +  + E+CP  LAP +S    L +GDA+A AL+++R F 
Sbjct: 118 LIAMSGNVKSTLAKQAEIFLNIAIKKEACPLQLAPMSSTTATLVMGDAIAAALMKARKFQ 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF + HPGG LG   +     +     +P+V       + + +++  + G   V+ E 
Sbjct: 178 PDDFALFHPGGSLGRKLLTKVKDLMVSKKLPIVNPETEFNELVDVMTSGKLGLCIVL-EN 236

Query: 261 QKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            KL GIIT+GD+ R      K       +++M  NPK+I ++ + T A QL+ +H I   
Sbjct: 237 DKLVGIITDGDLRRALKANAKPRFDFKAKEIMSHNPKIIDQEAMATEAEQLMLKHKIKE- 295

Query: 318 MVVDDCQKAIGIVHF 332
           +VV    + +GI+  
Sbjct: 296 IVVGKNGRVVGIIQL 310


>gi|148260667|ref|YP_001234794.1| KpsF/GutQ family protein [Acidiphilium cryptum JF-5]
 gi|326403861|ref|YP_004283943.1| KpsF/GutQ family protein [Acidiphilium multivorum AIU301]
 gi|146402348|gb|ABQ30875.1| KpsF/GutQ family protein [Acidiphilium cryptum JF-5]
 gi|325050723|dbj|BAJ81061.1| KpsF/GutQ family protein [Acidiphilium multivorum AIU301]
          Length = 340

 Score =  317 bits (814), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 138/293 (47%), Positives = 192/293 (65%), Gaps = 2/293 (0%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
              F  AV  +  I GRVV+TG+GKSGH+  K+A+TLASTGTP+ FVH AEASHGDLGMI
Sbjct: 47  GEGFTAAVTTLADIAGRVVVTGMGKSGHVARKIAATLASTGTPALFVHPAEASHGDLGMI 106

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
              D +I LS SG + EL AI+ + RRF++PL+AITS  +S +A  AD+VL LP  PE+ 
Sbjct: 107 VPGDAVIALSNSGEAAELAAIVSHVRRFALPLVAITSRAESTLARAADLVLLLPAAPEAG 166

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           P G+APTTS  MQ+A+GDA+A+ALL  R F+  DF + HPGGKLG       D+MH G++
Sbjct: 167 PIGMAPTTSTTMQMALGDAIAVALLARRGFTAADFGLFHPGGKLGARLRRVRDLMHEGEA 226

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +PL      +  AI +++ K FGC+ ++D  ++L G++T+GD+ R    DL T  V  +M
Sbjct: 227 VPLAGPDTRMDQAILLITAKHFGCLGIIDGERRLLGVVTDGDLRRAMAPDLLTREVGRIM 286

Query: 290 IKNPKVILEDTLLTVAMQLLRQH--NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +P+VI  + L   A+  +      +  L VVD+ ++ +GIVH  DLLR G+
Sbjct: 287 TTSPRVIGPERLAEEALHDMTALTPRVMSLFVVDESRRVLGIVHMHDLLRAGV 339


>gi|124268993|ref|YP_001022997.1| arabinose-5-phosphate isomerase [Methylibium petroleiphilum PM1]
 gi|124261768|gb|ABM96762.1| Arabinose-5-phosphate isomerase [Methylibium petroleiphilum PM1]
          Length = 340

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 137/324 (42%), Positives = 196/324 (60%), Gaps = 3/324 (0%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             +V+   +++  E + L +L+  + G ++  F  AV  +   +GRVV+ G+GKSGH+G 
Sbjct: 17  QRSVEMGAQALAVEAQALGALQQRIVGPMADAFARAVAAMLVCRGRVVVMGMGKSGHVGR 76

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+ FVH AEASHGDLGM+T  D+++ +S SG SDEL AIL   +R  + 
Sbjct: 77  KIAATLASTGTPAMFVHPAEASHGDLGMVTPSDIVLAISNSGESDELAAILPVLKRLGVM 136

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT    S +A HA++VL      E+CP  LAPT S   Q+A+GDALA+ALL++R F 
Sbjct: 137 LIAITGRADSNLARHAELVLDSAVAQEACPLNLAPTASTTAQMALGDALAVALLDARGFK 196

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           E DF   HPGG LG        DVM  GD++P V       D +  +S K  G  A+VD+
Sbjct: 197 EEDFARSHPGGSLGRKLLTHVRDVMRGGDAVPSVGPATAFTDLMREMSAKGLGATAIVDD 256

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +++GI T+GD+ R   K  DL  L+  +VM   P+ + +D L   A  L+  H I+ +
Sbjct: 257 AGRVQGIFTDGDLRRLIEKGGDLRALTAAEVMHPAPRTVRDDALAVDAADLMETHRITSV 316

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     +G ++  DLLR  +I
Sbjct: 317 LVVDAQGVLVGALNINDLLRAKVI 340


>gi|315223593|ref|ZP_07865448.1| arabinose 5-phosphate isomerase [Capnocytophaga ochracea F0287]
 gi|314946509|gb|EFS98503.1| arabinose 5-phosphate isomerase [Capnocytophaga ochracea F0287]
          Length = 320

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 125/326 (38%), Positives = 190/326 (58%), Gaps = 8/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +  A ++I  E + ++ L   +  +    F  ++E I   KGRVVITGIGKS  
Sbjct: 1   MKTEEIITIAKQTISEEAQAVAKLVDYIDDD----FTKSMEYILQSKGRVVITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +T+ STGTP+ F+HAA+A HGDLG+I +DD++I +S SG++ E+K ++   +R 
Sbjct: 57  IANKIVATMNSTGTPAIFMHAADAIHGDLGIIQQDDVVICISKSGNTPEIKVLVPLLKRG 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  LIAITS   SV+A  AD VL    E E+CP+ LAPTTS   QL +GDALA+ LLE +
Sbjct: 117 NNKLIAITSNRNSVLAQQADSVLYAHVEKEACPNNLAPTTSTTAQLVLGDALAVCLLEMK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F  +DF   HPGG LG         +   +  P V     +   I  +SEK  G  AV+
Sbjct: 177 HFGSSDFAKYHPGGALGKRLYLKVADIVVHNQKPEVAPDTDIKKVIVEISEKMLGVAAVI 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D   ++ G++T+GDI R   K   +  L  +D+M  NPK I  + L   A+ L+ ++ I+
Sbjct: 237 D-NGRIVGVVTDGDIRRMLSKTDSIKGLVAKDIMSANPKTIDLENLAIDALHLMEKNKIT 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V  +  +  GI+H  +L++ G+I
Sbjct: 296 QLLVTRE-GQYEGIIHLHNLIQEGLI 320


>gi|91215228|ref|ZP_01252200.1| KpsF/GutQ [Psychroflexus torquis ATCC 700755]
 gi|91186833|gb|EAS73204.1| KpsF/GutQ [Psychroflexus torquis ATCC 700755]
          Length = 320

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 132/326 (40%), Positives = 187/326 (57%), Gaps = 9/326 (2%)

Query: 19  MKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           M++  +Q  A   I+ E + + +LE+ +       F  AV+ I   KGRV+ITGIGKS  
Sbjct: 1   MEDVAIQSYAKDIILMESKAIQNLEALIDK----SFSDAVKAIFDSKGRVIITGIGKSAI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +TL STGTP+ F+HAA+A HGDLG I +DD++I +S SG++ E+K +    + F
Sbjct: 57  IATKIVATLNSTGTPAVFMHAADAIHGDLGTILKDDIVICISKSGNTPEIKVLAPLIKNF 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LIAIT    S +   AD VL    E E+CP+ LAPTTS   QL +GDALA+ LL+ R
Sbjct: 117 KNTLIAITGNKDSFLGKQADFVLNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLKLR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            FS NDF   HPGG LG         + S +  P V    PL D I  +S    G  AV+
Sbjct: 177 GFSRNDFAKFHPGGALGKTLYLRVSDITSQNMKPQVNPETPLKDVIIEISTNMLGVTAVL 236

Query: 258 DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E  ++ GIIT+GD+ R     ++   L  +D+M KNPK I    +   A+ LL  ++I+
Sbjct: 237 -ENDEVIGIITDGDLRRMLSTTENFTKLKAKDIMTKNPKTIANSAMAIDALDLLETYDIT 295

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L +  +  K  G+VH  +L++ GII
Sbjct: 296 QL-ISHENGKYAGVVHLHNLVKEGII 320


>gi|120603846|ref|YP_968246.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
 gi|120564075|gb|ABM29819.1| KpsF/GutQ family protein [Desulfovibrio vulgaris DP4]
          Length = 331

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 119/322 (36%), Positives = 179/322 (55%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +Q     +  E  G+ ++   L       F  A+  +   +GRVV+TG+GKSG +G
Sbjct: 8   QTDWLQRGRDVLDIEAEGIRAVRDRL----GPSFEAALALLAGCRGRVVVTGLGKSGLVG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+T +STG+P+FF+H  E +HGD+G +  DD++I +S SG +DEL AIL   R    
Sbjct: 64  RKLAATFSSTGSPAFFLHPVEGAHGDMGSLKADDVVIAISNSGETDELNAILPSLRAIGT 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IA+T    S +   ADIVL      E+CP GLAPT S    LA+GDALA+ L++ ++F
Sbjct: 124 PIIALTGRADSSLGRGADIVLDCGVPREACPLGLAPTASTTAVLALGDALAVCLIDWKSF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +ENDF   HPGG LG         +   + IP+V       +A+  L +  FG VA+ D 
Sbjct: 184 TENDFLRYHPGGSLGQRLRLRVAELMHTEGIPVVNEEAVCEEAVLALDKGGFGAVALTDG 243

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G +L GI+T+GD+ R   +      V    +M +NP+   +   +   + ++ Q  I+VL
Sbjct: 244 GGRLTGILTDGDVRRAVLRGTYGPRVGVTHIMTRNPRFARQTQSVAELIDIMEQKAITVL 303

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            + DD  + +G+VH  DLL  G
Sbjct: 304 PITDDDHRLVGLVHLHDLLGKG 325


>gi|221090719|ref|XP_002170017.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
          Length = 314

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 127/319 (39%), Positives = 184/319 (57%), Gaps = 8/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A +SI+++   +  L + L  +    F   V+ I   KGR+V+TGIGKS  I  K+ +
Sbjct: 2   ENAKQSILSQSESIQKLTNYLTDD----FAKTVQLIFESKGRLVVTGIGKSAIIAQKIVA 57

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL STGTPS F+HAAEA HGDLGMI   DL++ +S SG+S E+K +    + F   LI +
Sbjct: 58  TLNSTGTPSIFLHAAEAIHGDLGMIQTGDLVLCISKSGNSPEIKVLAPIIKSFGTTLIGM 117

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A  +D+VL    + E CP GLAPT S   QL +GDA+A+ L++ RNF   DF
Sbjct: 118 TANPTSFLATSSDLVLHAHVDAECCPIGLAPTNSTTAQLVLGDAIAVCLMKLRNFQAEDF 177

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +     M      P V     +   I  +SEKR G  AV+ E + + 
Sbjct: 178 AKYHPGGALGKKLLLRVKDMLDNTHAPQVAPNASIKKVIMEISEKRLGVTAVI-ENEVVI 236

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT+GDI R     +  + L+ +D+M KNPK I    L++ A+ +L  + I+ LMV+D+
Sbjct: 237 GIITDGDIRRMLTDRETFSDLTAQDIMTKNPKSIASTVLVSEALDVLEDYKITQLMVIDN 296

Query: 323 CQKAIGIVHFLDLLRFGII 341
                G++H  D+L+ GI+
Sbjct: 297 -GIYKGVLHLHDILKEGIV 314


>gi|153003237|ref|YP_001377562.1| KpsF/GutQ family protein [Anaeromyxobacter sp. Fw109-5]
 gi|152026810|gb|ABS24578.1| KpsF/GutQ family protein [Anaeromyxobacter sp. Fw109-5]
          Length = 344

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 121/323 (37%), Positives = 190/323 (58%), Gaps = 10/323 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++     + AE R ++++       L  +F  AV  +   +GRV++TG+GK G +  K+
Sbjct: 28  LLEYGRTVLDAESRAIAAV------RLDERFAEAVRWVLDCRGRVIVTGMGKPGFVAQKI 81

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPS +VH AEA+HGDLG ITRDD++I LS SG ++EL  +L   ++    ++
Sbjct: 82  SATLASTGTPSHYVHPAEAAHGDLGRITRDDVVIALSNSGETEELLRLLPALKKIGARVV 141

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T +  + +A  AD+ L +    E+CP GLAPT S  + LA+GDALA+ +L +R F + 
Sbjct: 142 AVTRDRVNPLARAADLALVIGDVAEACPMGLAPTASTAVLLAVGDALAMTVLANRPFEKE 201

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDEG 260
           ++ + HPGGKLG   +   ++M   +S P+V+   PL  A+  ++E   R G  +VVD  
Sbjct: 202 EYALFHPGGKLGRGLMKVRELMRGAESNPVVREDQPLSAAVARMTETPGRPGATSVVDAA 261

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R         +  V   M +NP+ +  D L+  A ++LRQ  I  + 
Sbjct: 262 GKLVGIFTDGDLRRLVEHGETDFTRPVSAAMGRNPRTVRPDALVVDAARVLRQARIDQVP 321

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVDD  + +G++   DLL   I+
Sbjct: 322 VVDDEGRPVGLLDVQDLLAAKIL 344


>gi|297569603|ref|YP_003690947.1| KpsF/GutQ family protein [Desulfurivibrio alkaliphilus AHT2]
 gi|296925518|gb|ADH86328.1| KpsF/GutQ family protein [Desulfurivibrio alkaliphilus AHT2]
          Length = 323

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 128/320 (40%), Positives = 190/320 (59%), Gaps = 7/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +V+ A   +  E  G+ +L      ++  +F  AVE I     R+V+TGIGKSG IG K+
Sbjct: 2   SVEQAREVLRIEAEGILALID----QVGDEFARAVELIMNCPSRLVLTGIGKSGIIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TL STGTP+FF+H  EA HGDLG++   D+I+ +S+SG + EL  +L   ++    +I
Sbjct: 58  AATLNSTGTPAFFLHPVEAMHGDLGVVDPRDVILAISYSGETAELNQLLPTLKKRGAAII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T   +S +A  AD+VL++    E+CP GLAPT S    LA+GDALA+ LL  + F   
Sbjct: 118 AMTGRPESSMARGADVVLSVTVPREACPLGLAPTASTTASLAMGDALAVVLLNRKKFDAR 177

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            F   HPGG LG  L V  ++VM +GD IP V     L +A+  L+ K  G V V+    
Sbjct: 178 AFRRNHPGGSLGERLKVRVAEVMLTGDGIPRVDSTASLAEALAELNRKNLGAVLVMASAH 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           ++ GI+T+GD+ R   +     TL++  VM  +PK I  + L   A+ ++++H ++VL V
Sbjct: 238 RMAGILTDGDVRRMLARGEGPETLTLAQVMTADPKSISAELLAADALSIMQRHEVTVLPV 297

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
            DD ++ IGI+H  DLL  G
Sbjct: 298 TDDERQLIGILHLQDLLGKG 317


>gi|326319549|ref|YP_004237221.1| KpsF/GutQ family protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323376385|gb|ADX48654.1| KpsF/GutQ family protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 339

 Score =  317 bits (813), Expect = 1e-84,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 192/324 (59%), Gaps = 7/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              V+ A  +   E   LS+L + + G     F   V ++ A  GRVV+ G+GKSGH+G 
Sbjct: 20  ERAVRLARETFDTEAAALSALAARVGG----AFADVVHRVLATSGRVVVMGMGKSGHVGR 75

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEASHGDLGM+T  DL++ +S SG S EL  +L   RR  +P
Sbjct: 76  KIAATLASTGTPAFFVHPAEASHGDLGMVTPGDLVLAISNSGESGELTVLLPVLRRLGVP 135

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+A+T   +S +A HAD+VL    E E+CP  LAPTTS   QLA+GDALA+ALL++R F 
Sbjct: 136 LVAMTGGLESTLARHADLVLDCGVEREACPLNLAPTTSTTAQLAMGDALAVALLDARGFR 195

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG       SDVM SG  +P V       + +  +S KR G  A+ D 
Sbjct: 196 SEDFARSHPGGALGRKLLTHVSDVMRSGTDVPRVLPEASFSELMREMSAKRLGASAIADA 255

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI T+GD+ R      DL +++  +VM   P+ I  D L   A +++ +H I+ +
Sbjct: 256 QGRILGIFTDGDLRRRIEAGADLRSVTAGEVMHAAPRTIAPDALAADAAEMMERHAITSV 315

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V  +     G+VH  DL+R  +I
Sbjct: 316 LVASEGGVLAGVVHIGDLMRAKVI 339


>gi|148825783|ref|YP_001290536.1| arabinose-5-phosphate isomerase [Haemophilus influenzae PittEE]
 gi|229846909|ref|ZP_04467016.1| KpsF [Haemophilus influenzae 7P49H1]
 gi|148715943|gb|ABQ98153.1| KpsF [Haemophilus influenzae PittEE]
 gi|229810398|gb|EEP46117.1| KpsF [Haemophilus influenzae 7P49H1]
          Length = 311

 Score =  317 bits (813), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L  +    F+  ++ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRLGDD----FNQVIDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  IVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAMTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       + +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTNCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|16264297|ref|NP_437089.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
 gi|15140434|emb|CAC48949.1| arabinose-5-phosphate isomerase [Sinorhizobium meliloti 1021]
          Length = 329

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 225/325 (69%), Gaps = 2/325 (0%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++ +  +    R+I     G+++L   L+    L   F  A+E + + +GRVV+ G+GKS
Sbjct: 4   VVSDPILASISRTIATAADGINALAGCLEDNAALRRSFVDAIELVASKRGRVVVAGVGKS 63

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TLASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+
Sbjct: 64  GHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAK 123

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF++P+I++TS   S +A ++ I + LPK PE+CPHGLAPTTSA++QLA+GDALAIALLE
Sbjct: 124 RFNVPVISVTSNADSTIARNSTIPVVLPKVPEACPHGLAPTTSAMLQLAVGDALAIALLE 183

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R FS  DF   HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V 
Sbjct: 184 RRGFSAEDFKTFHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSSKGFGVVG 243

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV    +L G+IT+GD+ R+  + L  L+VE VM   P+VI    L + AM++++   I+
Sbjct: 244 VVGGDGELVGVITDGDLRRHMSQSLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKIT 303

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           VL +VDD  +  GI+H  DLLR G+
Sbjct: 304 VLFLVDDVGRPSGILHVHDLLRAGV 328


>gi|254457639|ref|ZP_05071067.1| D-arabinose 5-phosphate isomerase [Campylobacterales bacterium GD
           1]
 gi|207086431|gb|EDZ63715.1| D-arabinose 5-phosphate isomerase [Campylobacterales bacterium GD
           1]
          Length = 320

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 120/319 (37%), Positives = 194/319 (60%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A  ++  E + L     +    +   F  AVE + A KG++V+TG+GKSG IG+K+A+
Sbjct: 5   EIAQETLNIEAQTLLLASKN----MGDVFDKAVEMVLACKGKLVVTGVGKSGLIGAKMAA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFF+H  EA HGDLGMI+++D++I +S+SG S+EL +IL + +RF  PLI +
Sbjct: 61  TFASTGTPSFFLHPTEALHGDLGMISQNDVVIAISYSGESEELSSILPHIKRFKTPLIGM 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +  ++D+V+ +  E E+CP  +APT+S  + LA+GDALA+ L+ +RNF ++DF
Sbjct: 121 TRDRNSTLGKYSDLVIDVVVEKEACPLDIAPTSSTTLTLALGDALAVCLMRARNFKKSDF 180

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +   D++P++     + +AI  +S  R G V + DE   L 
Sbjct: 181 ASFHPGGALGKKLFVKVSDLMKKDNLPIISKDTKVKEAIIEISHGRLGTVLIADENNSLI 240

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
            ++++GDI R    D  +L  +V     +NP+ +  E+ L + A+ ++ +  I +L+V D
Sbjct: 241 ALVSDGDIRRALLADDFSLEENVLKYATQNPRTLDDENILASEALVIIEEMKIQLLVVTD 300

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             +K  G++H   L+  GI
Sbjct: 301 KNKKIKGVLHIHTLIEKGI 319


>gi|145629231|ref|ZP_01785030.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.1-21]
 gi|145639166|ref|ZP_01794773.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           PittII]
 gi|144978734|gb|EDJ88457.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.1-21]
 gi|145271728|gb|EDK11638.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           PittII]
          Length = 311

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L       F+  ++ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRL----GEDFNQVIDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I ++  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGVETLNKTAKDFMTSSPKTIHQEEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|323698352|ref|ZP_08110264.1| KpsF/GutQ family protein [Desulfovibrio sp. ND132]
 gi|323458284|gb|EGB14149.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans ND132]
          Length = 338

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/322 (38%), Positives = 183/322 (56%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  A   +  E  GL ++   L G     F  A+  +    GRVV+TG+GKSG +G
Sbjct: 7   RKDWLALAREVLDIEAEGLRAVHDQLDG----AFVEALTAMAKCTGRVVVTGLGKSGLVG 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TL+STGTPSFF+H  E +HGDLGMI  +D+I+ LS SG++DE+ AIL   +    
Sbjct: 63  RKIAATLSSTGTPSFFLHPVEGAHGDLGMIRDEDVILALSNSGATDEVNAILPTLKSLGA 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+TS+  S +A  ADI + +    E+C  GLAPT+S   QLA+GDALA+ L++ ++F
Sbjct: 123 KVIAMTSDPASPMAGLADIHILVHVPREACRMGLAPTSSTTAQLAVGDALAVCLMDWKSF 182

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            ++DF   HPGG LG       D +   D +P+V     L  A++ L++   G VAVVD 
Sbjct: 183 GKDDFKRFHPGGSLGQRLATCVDQLMHTDGLPVVLEDAGLDAALSTLNKGGLGLVAVVDA 242

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +LKG++T+GD+ R            V +VM  +P+           + L+ +  I+VL
Sbjct: 243 LDRLKGVLTDGDVRRLVCAGELDTARPVREVMTVSPRRATAGESSAGVLDLMERSQITVL 302

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            VV D  +  G+VH  DLL  G
Sbjct: 303 PVVRDDGRLAGMVHLHDLLGKG 324


>gi|197106420|ref|YP_002131797.1| sugar isomerase, KpsF/GutQ [Phenylobacterium zucineum HLK1]
 gi|196479840|gb|ACG79368.1| sugar isomerase, KpsF/GutQ [Phenylobacterium zucineum HLK1]
          Length = 321

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 136/288 (47%), Positives = 187/288 (64%), Gaps = 5/288 (1%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ + A +GR++ TG+GKSGH+  KLA+T ASTGTP+FFVH AEASHGDLGMI   D I+
Sbjct: 36  VDLLFAAEGRIICTGMGKSGHVARKLAATFASTGTPAFFVHPAEASHGDLGMIGPADAIV 95

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
            LS SG + EL  +L YA RFSIPLIAIT++  S +   AD+VL L    E+     APT
Sbjct: 96  ALSKSGEARELADVLAYAGRFSIPLIAITADPSSALGRAADVVLQLADRSEATAQVNAPT 155

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           TS  +Q+A+GDALA+ALLE R F   DF+V HPGGKLG +     D+MH  D +PLV  G
Sbjct: 156 TSTTLQIALGDALAVALLERRGFKAQDFHVFHPGGKLGAMLRTVRDLMHGQDELPLVPEG 215

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KV 295
            P+  A+ +++EKR+G V V+D   +L G IT+GD+ R+    L   +  +VM   P KV
Sbjct: 216 APMRQALLVMTEKRWGIVGVLDADGRLIGAITDGDLRRHID-GLMDHTAGEVMTPGPRKV 274

Query: 296 ILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +    L + A+ L+      ++VL VV +  + +G++H  DLLR G++
Sbjct: 275 VPPGMLASEALALMSDPPPPVTVLFVV-EDGRPVGVLHVHDLLRAGVM 321


>gi|198244302|ref|YP_002216809.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205353782|ref|YP_002227583.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207858102|ref|YP_002244753.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|197938818|gb|ACH76151.1| gutQ protein [Salmonella enterica subsp. enterica serovar Dublin
           str. CT_02021853]
 gi|205273563|emb|CAR38550.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|206709905|emb|CAR34258.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|326628890|gb|EGE35233.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 321

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKPLSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|228473727|ref|ZP_04058474.1| arabinose 5-phosphate isomerase [Capnocytophaga gingivalis ATCC
           33624]
 gi|228274839|gb|EEK13657.1| arabinose 5-phosphate isomerase [Capnocytophaga gingivalis ATCC
           33624]
          Length = 321

 Score =  317 bits (812), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 123/323 (38%), Positives = 183/323 (56%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +  A  +I  E   L  L + L  +    F  +V+ I    GRVV+TGIGKS  I  
Sbjct: 5   NKILDFARETIETELYSLGKLTNFLDKD----FALSVQTILESGGRVVVTGIGKSAIIAQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ STGTPS F+HAA+A HGDLGMI   D+II +S SG++ E+K ++   +R   P
Sbjct: 61  KIVATMNSTGTPSLFMHAADAIHGDLGMIQPKDVIICISKSGNTPEIKVLVPLLKREGNP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT+  +S +A  A+ VL    + E+CP+ LAPTTS   QL +GDAL++AL+  ++F 
Sbjct: 121 LIAITANRESFLATQANYVLYAYTQKEACPNNLAPTTSTTAQLVMGDALSVALMRMKSFG 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG           + + +P V     +   I  +S+K  G  AV+ EG
Sbjct: 181 SEDFAKYHPGGALGKRLYLTVGEAIARNQVPSVAPDTDIRQVIVEISQKMLGVTAVL-EG 239

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             + G+IT+GDI R   +  D+  L  +D+M  +PK I    L   A+  ++ H I+ L+
Sbjct: 240 DAIVGVITDGDIRRMLSRYEDIKGLKAKDIMSSHPKTIESSVLAVDALDFMQNHKITQLL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V     + +G++H  +L++ GII
Sbjct: 300 VT-HSSRYMGVIHLHNLIQEGII 321


>gi|313892382|ref|ZP_07825974.1| arabinose 5-phosphate isomerase [Dialister microaerophilus UPII
           345-E]
 gi|313119241|gb|EFR42441.1| arabinose 5-phosphate isomerase [Dialister microaerophilus UPII
           345-E]
          Length = 323

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 126/326 (38%), Positives = 190/326 (58%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A  ++  E   +   E SL       F    E I  IKGRV++TG+GKSG I  K
Sbjct: 2   DVLKTAKEAMRIEAESILLTEKSLDK----HFKKVAELILNIKGRVILTGMGKSGQIAGK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +ASTLASTGTP+FF+H  EA HGDLG IT  D++ +LS SG ++E+  ++    +    +
Sbjct: 58  IASTLASTGTPAFFLHPGEAIHGDLGKITSYDIVFMLSNSGETEEIINLIPSIEKIGATV 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T    S +A  AD+VL +  + E+    + PT+S+   LAIGDALAI L++ ++F+ 
Sbjct: 118 IVMTGCKNSTLAQKADVVLPVVIKKEADEFNMVPTSSSTTMLAIGDALAITLMKLKSFTS 177

Query: 202 NDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             F + HPGG LG    +    +MHSG   P VK    + +A+ +++ K  G V+++DE 
Sbjct: 178 ERFALYHPGGTLGKKMLMTVKQIMHSGKGNPTVKPTLTVQEALFVMTAKGLGAVSIIDEE 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
            KLKGI+T+GDI R   K  D     V+DVMIKNP ++    LL  A++L++ H    ++
Sbjct: 238 GKLKGILTDGDIRRGLEKHADFLKFEVKDVMIKNPIIVHPSQLLVNALELMKSHKPNPVT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL V +      G++H  DLL+ G++
Sbjct: 298 VLPVCEKDGYVCGMIHLTDLLKQGVL 323


>gi|194291851|ref|YP_002007758.1| polysialic acid capsule expression protein, arabinose-5-phosphate
           isomerase [Cupriavidus taiwanensis LMG 19424]
 gi|193225755|emb|CAQ71701.1| polysialic acid capsule expression protein, putative
           Arabinose-5-phosphate isomerase [Cupriavidus taiwanensis
           LMG 19424]
          Length = 320

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 115/317 (36%), Positives = 172/317 (54%), Gaps = 7/317 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +  A   +  E + L  + S         F  AVE I   +GRVV+ G+GKSG IG 
Sbjct: 2   TEVIALARNVVATEIQALDRMSS----RFDAGFEKAVEIILQARGRVVVVGMGKSGLIGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ASTGTP+FFVH  EA HGDLGMI   D+++++S SG ++EL  IL +      P
Sbjct: 58  KIAATMASTGTPAFFVHPGEAFHGDLGMIKPIDVVLMISNSGETEELIRILPFLEHQENP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            IA+T   +S +A HAD+VL +  + E+C + LAPT+S    L +GDALA+ L   R+F 
Sbjct: 118 AIAMTGNVRSTLARHADVVLDISVQREACNNNLAPTSSTTATLVMGDALAVVLAVKRDFQ 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG   +     +   D++P+ +      D + +++  R G   V+D G
Sbjct: 178 PADFARFHPGGSLGRKLLTRVADVMHKDNLPVCRPDASFRDVVHVINRGRLGMALVMD-G 236

Query: 261 QKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           ++L+G+IT+GD+ R F   +D   +    +M   PK +        A   +    I  L+
Sbjct: 237 EQLQGVITDGDVRRAFDSDRDYKAIMARHIMSNAPKTVSPGERFADAEARIHAARIGALV 296

Query: 319 VVDDCQKAIGIVHFLDL 335
           V D+  K +GI+   DL
Sbjct: 297 VKDEAGKVVGILQIHDL 313


>gi|223042048|ref|ZP_03612225.1| arabinose-5-phosphate isomerase [Actinobacillus minor 202]
 gi|223017165|gb|EEF15600.1| arabinose-5-phosphate isomerase [Actinobacillus minor 202]
          Length = 311

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 122/314 (38%), Positives = 186/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++      +  L       L  +F+ AVE I   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLTSAKETLTRYAYEIERL----NQRLDEEFNQAVEMILNCEGRVVVAGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TLASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATLASTGTPSFFLHPTEAFHGDLGMLKAIDIVILISNSGETDDVNKLIPSLKGFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +  HADIVL +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +RNF  
Sbjct: 118 IAMTGNPHSTLGKHADIVLNINVEREACPNNLAPTTSTLVTMALGDALAIALINARNFRA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C    +     +P+        + +++++E R G VAV+ +G 
Sbjct: 178 EDFARFHPGGSLGRKLLCRVRDVM-NPKVPITSPSTSFSECLSVMNEGRMG-VAVIMQGD 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R   K   +    + E +M +NPK I + T L  A + ++  +I  L+
Sbjct: 236 QLEGIITDGDIRRALAKFGAESLNKTAEQIMTRNPKTIKDSTFLAKAEEQMKALHIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
            +DD  K  G++ F
Sbjct: 296 ALDDHGKVSGLIEF 309


>gi|237808636|ref|YP_002893076.1| D-arabinose 5-phosphate isomerase [Tolumonas auensis DSM 9187]
 gi|237500897|gb|ACQ93490.1| KpsF/GutQ family protein [Tolumonas auensis DSM 9187]
          Length = 321

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 123/324 (37%), Positives = 177/324 (54%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    +  A  ++  E +        L   L   F  A   +   KG+ V++GIGKSGHI
Sbjct: 1   MNEDLLSYAKETLEIEIKE----AQRLLDRLDENFLSACHLLLNCKGKAVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++LASTGTP+FFVH AEA HGDLGMI  DD++I +S+SG + E + IL   +   
Sbjct: 57  GKKIAASLASTGTPAFFVHPAEALHGDLGMIGVDDVLIFISYSGKAKEQEYILPLIKENQ 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I LIA+T +  S +A  A  VL +  E E+CP G+APT+SA+  L +GDALA+AL+  R 
Sbjct: 117 ISLIAMTGDKNSPLAKAATCVLDISVEREACPIGVAPTSSAVNTLMMGDALAMALMRQRG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   DF   HPGG LG  L     DVM + + +P+V     +++A+  LS    G VAV 
Sbjct: 177 FGAEDFARSHPGGSLGARLLNRVHDVMQTDELLPIVDEHSSVMEAMLELSRTGMGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  + + G+ T+GD+ R   K +  +  +E  M +           + A+  L +H IS 
Sbjct: 237 DAEKYVVGVFTDGDLRRWLVKENSLSNQLEQAMTRPGYRFPSHWRASEALDALHEHQISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             VVD     +G+++   L   GI
Sbjct: 297 APVVDANGILVGVLNLHRLHDAGI 320


>gi|326560504|gb|EGE10886.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 7169]
 gi|326565766|gb|EGE15928.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC1]
          Length = 339

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 128/334 (38%), Positives = 202/334 (60%), Gaps = 6/334 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
              +  K ++L  +  +Q A+ +I  E+R L  L   L       F  A + I    GRV
Sbjct: 10  MNEMAMKQNNLAPSDYIQDAIDAIRTEQRALELLIDELDER----FVNACQTILNCSGRV 65

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+TG+GKSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE+
Sbjct: 66  VVTGMGKSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEI 125

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           + +L   ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GD
Sbjct: 126 RMLLPVVKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGD 185

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALL +R F+ +DF + HP G LG   +     +   D +P+V     L + + +++
Sbjct: 186 ALAVALLHARGFTSHDFALSHPAGALGRRLLTRVSDIMHTDHLPVVHHQSSLNETLLVMT 245

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAM 306
             R G   VVD+  K+ GI T+GD+ R   ++ N T+ ++ +M K PK + +    + A+
Sbjct: 246 SGRLGLAVVVDDDGKVVGIFTDGDLRRKLAENTNLTVEIQTLMTKTPKSVDQQMRASDAL 305

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+ ++ IS L+V+   ++ IG++   D+L+ GI
Sbjct: 306 SLMNENAISQLLVL-KDRQLIGVISIHDILKAGI 338


>gi|329121347|ref|ZP_08249973.1| arabinose 5-phosphate isomerase [Dialister micraerophilus DSM
           19965]
 gi|327469756|gb|EGF15222.1| arabinose 5-phosphate isomerase [Dialister micraerophilus DSM
           19965]
          Length = 323

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 124/326 (38%), Positives = 189/326 (57%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A  ++  E   +   E SL       F    E I  IKGRV++TG+GKSG I  K
Sbjct: 2   DVLKTAKEAMRIEAESILLTEKSLDK----HFKKVAELILNIKGRVILTGMGKSGQIAGK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +ASTLASTGTP+FF+H  EA HGDLG IT  D++ +LS SG ++E+  ++    +    +
Sbjct: 58  IASTLASTGTPAFFLHPGEAIHGDLGKITSYDIVFMLSNSGETEEIINLIPSIEKIGATV 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +T    S +A  AD+VL +  + E+    + PT+S+   LAIGDALAI L++ ++F+ 
Sbjct: 118 IVMTGCKNSTLAQKADVVLPVVIKKEADEFNMVPTSSSTTMLAIGDALAITLMKLKSFTS 177

Query: 202 NDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             F + HPGG LG    +    +MHSG   P VK    + +A+ +++ K  G V+++DE 
Sbjct: 178 EHFALYHPGGTLGKKMLMTVKQIMHSGKDNPAVKPKLTVQEALFVMTAKGLGAVSIIDEK 237

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---IS 315
            KLKGI+T+GDI R   K  D     V++VMIKNP  +    L+  A++L++ H    ++
Sbjct: 238 GKLKGILTDGDIRRGLEKHADFLKFEVKEVMIKNPITVHPSQLVVDAIELMKSHKPNPVT 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
           VL V +      G++H  DLL+ G++
Sbjct: 298 VLPVCEKDGYVCGMIHLTDLLKQGVL 323


>gi|86140389|ref|ZP_01058948.1| carbohydrate isomerase, KpsF/GutQ family protein [Leeuwenhoekiella
           blandensis MED217]
 gi|85832331|gb|EAQ50780.1| carbohydrate isomerase, KpsF/GutQ family protein [Leeuwenhoekiella
           blandensis MED217]
          Length = 322

 Score =  316 bits (811), Expect = 2e-84,   Method: Composition-based stats.
 Identities = 130/323 (40%), Positives = 191/323 (59%), Gaps = 7/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +  A R+I  E   +++L + +  +    F  AV  I   KGRV+I+G+GKS  I  
Sbjct: 5   EQILDSAKRTIAMELEAVANLHTLIDQD----FAKAVSCIYNAKGRVIISGVGKSAIIAQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGTP+ F+HAA+A HGDLG I ++D++I LS SG++ E+K ++   +     
Sbjct: 61  KIVATLNSTGTPAVFMHAADAIHGDLGTIQKEDVVICLSNSGNTAEIKVLIPLIKNQENT 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+TS   S +A +AD ++    E E+CPH LAPTTS  +QL +GDALA+ALL+ R FS
Sbjct: 121 VIAMTSNKDSFLAKNADGLILAYAEKEACPHNLAPTTSTTVQLVMGDALALALLDLRGFS 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         + + +  P V    P+   I  +S+KR G  AV  + 
Sbjct: 181 KEDFAKYHPGGALGKKMYLRVSDLTALNDKPEVAPDTPIKAVIIEISQKRLGVTAVT-KD 239

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            K+ GIIT+GDI R   K+  L  L+ E +M KNPK I  D + T A+ +L  ++I+ L+
Sbjct: 240 DKIVGIITDGDIRRMLEKNEVLTGLTAESIMSKNPKQITTDAMATEALDILETNSITQLL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
            VD      G+VH  DL++ GI+
Sbjct: 300 AVDHDNNYAGVVHLHDLIKEGIL 322


>gi|161502116|ref|YP_001569228.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863463|gb|ABX20086.1| hypothetical protein SARI_00133 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 321

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLHAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVSGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|240947845|ref|ZP_04752285.1| arabinose-5-phosphate isomerase [Actinobacillus minor NM305]
 gi|240297807|gb|EER48243.1| arabinose-5-phosphate isomerase [Actinobacillus minor NM305]
          Length = 311

 Score =  316 bits (811), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 186/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++      +  L       L  +F+ AVE I   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLTSAKETLTRYAYEIERL----NQRLDEEFNQAVEMILNCEGRVVVAGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TLASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATLASTGTPSFFLHPTEAFHGDLGMLKAIDIVILISNSGETDDVNKLIPSLKGFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +  HADIVL +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +RNF  
Sbjct: 118 IAMTGNPHSTLGKHADIVLNINVEREACPNNLAPTTSTLVTMALGDALAIALINARNFRA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C    +     +P+        + +++++E R G VAV+ +G 
Sbjct: 178 EDFARFHPGGSLGRKLLCRVRDVM-NPKVPVTSPSTSFSECLSVMNEGRMG-VAVIMQGD 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R   K   +    + E +M +NPK I + T L  A + ++  +I  L+
Sbjct: 236 QLEGIITDGDIRRALAKFGAESLNKTAEQIMTRNPKTIEDSTFLAKAEEQMKALHIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
            +D+  K  G++ F
Sbjct: 296 ALDEHGKVSGLIEF 309


>gi|284926652|gb|ADC29004.1| arabinose 5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           IA3902]
          Length = 315

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L  +L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLAKNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEEILKIIPAIKKRKIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  R G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGRLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A +++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   ++ +GI+  
Sbjct: 296 IVGKEERVMGIIQL 309


>gi|326800754|ref|YP_004318573.1| KpsF/GutQ family protein [Sphingobacterium sp. 21]
 gi|326551518|gb|ADZ79903.1| KpsF/GutQ family protein [Sphingobacterium sp. 21]
          Length = 321

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 133/324 (41%), Positives = 193/324 (59%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+     A+ ++  E   +S L  ++  +    F   V  I  IKGRV+ITGIGKS  I 
Sbjct: 4   KSDIENIAISALTLEAEAISKLTKNINED----FINTVHAILDIKGRVIITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T+ STGTP+ F+HAA+A HGDLGM+ ++D++I +S SG++ E+K ++   +  + 
Sbjct: 60  QKIVATMNSTGTPAIFMHAADAIHGDLGMLQQEDIVIAISKSGNTPEIKVLVPLLKNSNA 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+    KS +A  AD +L      E+CP  LAPTTS   QLA+GDALAI LLE R+F
Sbjct: 120 KIIAMVGNTKSYLAEQADFILDTTVSREACPLNLAPTTSTTAQLAMGDALAICLLECRSF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +DF   HPGG LG         +   ++ P VK   P+   +  +++ R G VAVV++
Sbjct: 180 TNDDFAKYHPGGALGKRLYLKVTDLARQNAKPEVKSDTPIKAVLVEITKNRLGAVAVVND 239

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ GIIT+GDI R     +D+  L  ED+M  NPKVI  D L   A+ ++R ++I+ L
Sbjct: 240 K-KISGIITDGDIRRMLESNQDIGKLKAEDIMGNNPKVIQYDELAVHALNMMRNNHITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VV + Q   GIVH  DLL  GII
Sbjct: 299 LVVRNNQYD-GIVHLHDLLNEGII 321


>gi|319779024|ref|YP_004129937.1| Arabinose 5-phosphate isomerase [Taylorella equigenitalis MCE9]
 gi|317109048|gb|ADU91794.1| Arabinose 5-phosphate isomerase [Taylorella equigenitalis MCE9]
          Length = 325

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 137/329 (41%), Positives = 200/329 (60%), Gaps = 7/329 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             +     ++ A  +   E   L ++ S +      +F  AVE I A KGRV++TGIGKS
Sbjct: 1   MQMKSTDHLESARTTFNIEASALQNIASKI----GHEFIDAVELILARKGRVIVTGIGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GH+  K+ASTL+STGT ++FVHAAEA HGDLGMIT+DD++I +S+SG S E   IL   +
Sbjct: 57  GHVARKIASTLSSTGTAAYFVHAAEAIHGDLGMITKDDIVIAISYSGQSAEFATILPIIK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    +IAIT   +S +A  ++IVL +  E E+CP GLAPTTS    +A+GDA+AIA L+
Sbjct: 117 RSGAQIIAITGGLESELAQISNIVLNVKVEREACPMGLAPTTSTTATMAMGDAIAIACLK 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +  FS+ DF   HPGG LG   +   SD+M     +P+V +   +   +  +S K  G  
Sbjct: 177 AMQFSDQDFARSHPGGALGRKLLTKVSDIMRPLHDLPIVSVDATMDQILKTMSSKTLGMA 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
             +D+ QK KGI T+GD+ R   K  D+ + ++  VM K+PK I ED + T A+ ++  +
Sbjct: 237 CSIDDIQKPKGIFTDGDLRRLIQKHGDVRSFTMSQVMSKSPKTISEDLMATEALNIMEAY 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +I++L+V D+  K  G +H  DLLR  +I
Sbjct: 297 SINLLLVTDEQGKLAGALHMQDLLRSKVI 325


>gi|57241893|ref|ZP_00369833.1| KpsF/GutQ family protein [Campylobacter upsaliensis RM3195]
 gi|57017085|gb|EAL53866.1| KpsF/GutQ family protein [Campylobacter upsaliensis RM3195]
          Length = 316

 Score =  316 bits (810), Expect = 3e-84,   Method: Composition-based stats.
 Identities = 120/315 (38%), Positives = 182/315 (57%), Gaps = 9/315 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             T++ A      E   + +L  +L       F  A+E I  IKGR +I+G+GKSGHIG+
Sbjct: 2   KETLKIAKEVFEIEAEAIRNLSENL----DHNFSKAIELILDIKGRCIISGMGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMIT +D++I +S SG ++EL  I+   +R  IP
Sbjct: 58  KIAATLASTGTPSFFIHPGEALHGDLGMITSEDVLIAISNSGETEELLKIIPAVKRRQIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA++   KS +A  A+I L +  + E+CP  LAP +S    L +GDA+A AL+++R F 
Sbjct: 118 LIAMSGNIKSTLAKQAEIFLNIAIKKEACPLQLAPMSSTTATLVMGDAIAAALMKARKFQ 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF + HPGG LG   +     +     +P+V       + + +++  + G   V+ E 
Sbjct: 178 PDDFALFHPGGSLGRKLLTKVKDLMVSKKLPIVNPQTEFNELVNVMTSGKLGLCIVL-EN 236

Query: 261 QKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            KL GIIT+GD+ R      K       +++M  NPK+I ++ + T A QL+ +H I   
Sbjct: 237 DKLVGIITDGDLRRALKANAKPRFDFKAKEIMSHNPKIIDQEAMATEAEQLMLKHKIKE- 295

Query: 318 MVVDDCQKAIGIVHF 332
           +VV    + +GI+  
Sbjct: 296 IVVGKNGRVVGIIQL 310


>gi|115372698|ref|ZP_01460005.1| KpsF/GutQ [Stigmatella aurantiaca DW4/3-1]
 gi|310823817|ref|YP_003956175.1| gutq protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370419|gb|EAU69347.1| KpsF/GutQ [Stigmatella aurantiaca DW4/3-1]
 gi|309396889|gb|ADO74348.1| GutQ protein [Stigmatella aurantiaca DW4/3-1]
          Length = 353

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 188/320 (58%), Gaps = 8/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   + AE R +      L G L   F  AV  ++   G+ V+TG+GK+G IG KL
Sbjct: 35  LLRYAREVLEAEARAI----QGLTGRLGDPFLRAVALLRQCPGQAVVTGMGKAGLIGQKL 90

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTG  SF++H AEA HGDLG + R D+I+ LS SG+++EL  +L   RR   P+I
Sbjct: 91  SATLASTGIRSFYLHPAEAVHGDLGRVGRGDVILALSNSGATEELLRLLPSFRRLETPVI 150

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T E  S +A  +D+VL L +  E+CP GL PTTS     A+GDAL + L+ SR+F+  
Sbjct: 151 ALTGEADSPLARGSDVVLDLGRLEEACPMGLVPTTSTAALHAMGDALVMTLMRSRSFTTE 210

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDEG 260
            +  LHPGGK+G      +DVM +G + P+VK    L DA+ ++++   R G  +VVD  
Sbjct: 211 QYAQLHPGGKIGRSVQRVADVMRTGPANPVVKETAKLSDAVGVMTQTPGRPGATSVVDRQ 270

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI T+GD+ R   +     +V   DVM + P+ +  +TL+  A   +R+  +  L 
Sbjct: 271 GKLVGIFTDGDLRRMVEQGRTDFTVPMRDVMGRRPRCVSPETLVLTAAAQMRESRVDQLP 330

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD   +A+G++   DLL  
Sbjct: 331 VVDAEGRAVGLLDVQDLLAA 350


>gi|26249521|ref|NP_755561.1| hypothetical protein c3686 [Escherichia coli CFT073]
 gi|26109929|gb|AAN82134.1|AE016766_222 Hypothetical protein yrbH [Escherichia coli CFT073]
          Length = 339

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKI 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|34556521|ref|NP_906336.1| hypothetical protein WS0067 [Wolinella succinogenes DSM 1740]
 gi|34482235|emb|CAE09236.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 322

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 119/325 (36%), Positives = 192/325 (59%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M    ++ A   +  E + +      +  +    F  A++ ++  +G+V+I G+GKSG I
Sbjct: 1   MNIDDIKQAKAVLQLEAQEMLRAAEGISTD----FSKALDLMQFCRGKVIIMGVGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+A+TLASTGTPSFF+H  EA HGDLGMI ++D+++ +S+SG S EL AIL + +RF 
Sbjct: 57  GAKIAATLASTGTPSFFIHPTEAMHGDLGMIGKEDVVLAISYSGESGELVAILPHLKRFG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPLI ++   +S ++   D  +++  E E+CP   APT S  + LA+GDALA+ L+E R 
Sbjct: 117 IPLITMSQNPQSSLSKVGDAFISIWIEREACPLNAAPTCSTTLTLALGDALAVCLMERRG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F E DF   HPGG LG         +   +++PL+    PL +AI  +S+ R G   +VD
Sbjct: 177 FKECDFASFHPGGSLGRRLFVKVTDLMQSENLPLIPPHLPLKEAIVKMSDGRLGNAIIVD 236

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDT-LLTVAMQLLRQHNIS 315
           E  +L G++++GD+ R   ++   LS +  D   KNPK   ++T L +  ++ + ++ I 
Sbjct: 237 EEGRLTGVLSDGDLRRAMMREEFNLSAKAIDYATKNPKYCDDETILASEILRYIEENKIQ 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L++ D  ++  G VH   L+  GI
Sbjct: 297 LLVITDKEKRVKGAVHLHKLIEAGI 321


>gi|331654185|ref|ZP_08355185.1| protein GutQ [Escherichia coli M718]
 gi|331047567|gb|EGI19644.1| protein GutQ [Escherichia coli M718]
          Length = 321

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K +G ++  D  + GII
Sbjct: 297 APVVDENGKLVGAINLQDFYQAGII 321


>gi|295097289|emb|CBK86379.1| KpsF/GutQ family protein [Enterobacter cloacae subsp. cloacae NCTC
           9394]
          Length = 321

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 187/325 (57%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    ++++ E +      S L   L   F  A   I   +G+V++ GIGKSGHI
Sbjct: 1   MSDFLLNAGRQTLLLELQE----ASRLPERLGEDFVRAANTIIHCEGKVIVAGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SGS+ EL  I+   +  S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +++S +A  A   L +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKSRSPLALAAKATLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M + D+IP VK+   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRTDDAIPQVKLDTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  +++KG+ T+GD+ R           V + M +    +  D+    A ++L +  I+ 
Sbjct: 237 DNDRQVKGVFTDGDLRRWLVGGGKLEARVSEAMTQGGLTLNADSRAIEAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  +  G ++  D  + GII
Sbjct: 297 APVVDEHGRLCGAINLQDFYQAGII 321


>gi|283835563|ref|ZP_06355304.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291068773|gb|EFE06882.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 321

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANTIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEAPHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALAIA++++R 
Sbjct: 117 VALLAMTGKPTSPLGLAAKAVLDISVEREACPMRLAPTSSTVNTLMMGDALAIAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVTLTTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A ++L +  I+ 
Sbjct: 237 DEQSLVKGVFTDGDLRRWLVGGGALTTQVSEAMTHNGITLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|254669575|emb|CBA03568.1| KpsF protein [Neisseria meningitidis alpha153]
          Length = 315

 Score =  316 bits (809), Expect = 4e-84,   Method: Composition-based stats.
 Identities = 111/319 (34%), Positives = 169/319 (52%), Gaps = 9/319 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + ++ A+ ++  E   +  +   L  E    F  A+E I   +GRVV+ G+GKSG I
Sbjct: 1   MKTNFLKLAVETLQLEANAIMEMSKRLDNE----FEKAIEIILNTQGRVVVVGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T+ASTGT +FFVH  EA HGDLGMI   D+ +++S SG ++E+  IL + +   
Sbjct: 57  GQKLAATMASTGTSAFFVHPGEAFHGDLGMIKPIDVALLISNSGETEEIIRILPFLKEQG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T   KS +A HA  +L +    E+C + LAPT+S    LA+GDALA+ L   + 
Sbjct: 117 NKIIAMTGNIKSTLAKHAHSLLDISVSREACSNNLAPTSSTTCTLAMGDALAMVLQSEKK 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGG LG   +     +                + +  ++    G   V+ 
Sbjct: 177 FLPEDFARFHPGGSLGRRLLTRVSDVMKTKIPH-CLPDASFKEIVYSINRGYMGLTLVM- 234

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GIIT+GD+ R F +  ++N +  +D+M  +PK +  DT    A   +    I  
Sbjct: 235 EHDTLHGIITDGDLRRAFDRFDNINQIKAKDIMSLSPKYVSADTRFAEAEAYMHAEKIDS 294

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L VV +  K IG+++  D+
Sbjct: 295 L-VVKESNKVIGVLNIYDI 312


>gi|237729662|ref|ZP_04560143.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
 gi|226908268|gb|EEH94186.1| D-arabinose 5-phosphate isomerase [Citrobacter sp. 30_2]
          Length = 321

 Score =  316 bits (809), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 184/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANTIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALAIA++++R 
Sbjct: 117 VALLAMTGKPTSPLGLAAKAVLDISVEREACPMRLAPTSSTVNTLMMGDALAIAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP VK+   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVKLTTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+   +KG+ T+GD+ R        T  V + M +N   +   +    A ++L +  I+ 
Sbjct: 237 DDQSLVKGVFTDGDLRRWLVGGGALTTQVSEAMTQNGITLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|150377133|ref|YP_001313729.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
 gi|150031680|gb|ABR63796.1| KpsF/GutQ family protein [Sinorhizobium medicae WSM419]
          Length = 329

 Score =  315 bits (808), Expect = 5e-84,   Method: Composition-based stats.
 Identities = 157/325 (48%), Positives = 225/325 (69%), Gaps = 2/325 (0%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAIKGRVVITGIGKS 75
           ++ +  +    R+I     G+ +L + L+    L   F  A+E + + +GRVV+ G+GKS
Sbjct: 4   VVSDPILASISRTIATAADGIHALAACLEENAALRRSFVDAIELVASKRGRVVVAGVGKS 63

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TLASTGT ++FVH  EASHGDLGMIT +DL+I+LSWSG + EL  +L YA+
Sbjct: 64  GHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAEDLLILLSWSGETVELGNVLTYAK 123

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF++P+I++TS   S +A ++ I + LPK PE+CPHGLAPTTSAI+QLA+GDA AIALLE
Sbjct: 124 RFNVPVISVTSNADSTIARNSTIPVILPKVPEACPHGLAPTTSAILQLAVGDAFAIALLE 183

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R FS  DF   HPGGKLG+  + A ++ HSG+++PL+ IG P+ +A+  +S K FG V 
Sbjct: 184 RRGFSAEDFKTFHPGGKLGSQLLLAHELAHSGEAVPLLPIGSPMSEAVIQMSCKGFGVVG 243

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VV    +L G+IT+GD+ R+  ++L  L+VE VM   P+VI    L + AM++++   I+
Sbjct: 244 VVGGDGELVGVITDGDLRRHMSQNLLLLTVETVMSHMPRVITPGMLASAAMEMMQSQKIT 303

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           VL +VDD  +  GI+H  DLLR G+
Sbjct: 304 VLFLVDDVGRPSGILHVHDLLRAGV 328


>gi|301017364|ref|ZP_07182122.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
 gi|300400241|gb|EFJ83779.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
          Length = 327

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKI 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEGSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|218706565|ref|YP_002414084.1| polysialic acid capsule expression protein [Escherichia coli
           UMN026]
 gi|254038116|ref|ZP_04872174.1| polysialic acid capsule expression protein [Escherichia sp. 1_1_43]
 gi|218433662|emb|CAR14577.1| Polysialic acid capsule expression protein [Escherichia coli
           UMN026]
 gi|226839740|gb|EEH71761.1| polysialic acid capsule expression protein [Escherichia sp. 1_1_43]
          Length = 339

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|326560121|gb|EGE10511.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 46P47B1]
 gi|326565406|gb|EGE15583.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 103P14B1]
 gi|326573394|gb|EGE23362.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 101P30B1]
 gi|326575709|gb|EGE25632.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis CO72]
 gi|326577175|gb|EGE27069.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis O35E]
          Length = 339

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 128/334 (38%), Positives = 201/334 (60%), Gaps = 6/334 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
              +  K ++L  +  +Q A+ +I  E+R L  L   L       F  A + I    GRV
Sbjct: 10  MNEMAMKQNNLAPSDYIQDAIDAIRTEQRALELLIDELDER----FVNACQTILNCSGRV 65

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+TG+GKSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE+
Sbjct: 66  VVTGMGKSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEI 125

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           + +L   ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GD
Sbjct: 126 RMLLPVVKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGD 185

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALL +R F+ +DF + HP G LG   +     +   D +P+V     L + + +++
Sbjct: 186 ALAVALLHARGFTSHDFALSHPAGALGRRLLTRVSDIMHTDHLPVVHHQSSLNETLLVMT 245

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAM 306
             R G   VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+
Sbjct: 246 SGRLGLAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDAL 305

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+ ++ IS L+V+   ++ IG++   D+L+ GI
Sbjct: 306 SLMNENAISQLLVL-KDRQLIGVISIHDILKAGI 338


>gi|38145969|emb|CAE11289.1| D-arabinose-5-phosphate isomerase [Neisseria meningitidis]
          Length = 315

 Score =  315 bits (808), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 9/319 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + ++ A+ ++  E   +  +   L  E    F  A+E I   +GRVV+ G+GKSG I
Sbjct: 1   MKTNFLKLAVETLQLEANAIMEMSKRLDNE----FEKAIEIILNTQGRVVVVGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T+ASTGT +FFVH  EA HGDLGMI   D+ +++S SG ++E+  IL + +   
Sbjct: 57  GQKLAATMASTGTSAFFVHPGEAFHGDLGMIKPIDVALLISNSGETEEIIRILPFLKEQG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T   KS +A HA  +L +    E+C + LAPT+S    LA+GDALA+ L   + 
Sbjct: 117 NKIIAMTGNIKSTLAKHAHSLLDISVSREACSNNLAPTSSTTCTLAMGDALAMVLQSEKK 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGG LG   +     +                + +  ++    G   V+ 
Sbjct: 177 FLPEDFARFHPGGSLGRRLLTRVSDVMKTKIPH-CLPDASFKEIVYSINRGYMGLTLVM- 234

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E   L GIIT+GD+ R F +  ++N +  +D+M  +PK +  D     A   +    I  
Sbjct: 235 EHDTLHGIITDGDLRRAFDRFDNINQIKAKDIMSLSPKYVSADARFAEAEAYMHAEKIDS 294

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L VV +  K IG+++  D+
Sbjct: 295 L-VVKESNKVIGVLNIYDI 312


>gi|117625246|ref|YP_854329.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           APEC O1]
 gi|115514370|gb|ABJ02445.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           APEC O1]
          Length = 339

 Score =  315 bits (807), Expect = 6e-84,   Method: Composition-based stats.
 Identities = 121/328 (36%), Positives = 184/328 (56%), Gaps = 6/328 (1%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           + +     S ++   +    +++  +   L +L   L    S Q+   +  I   KG V+
Sbjct: 16  RHLPDDQSSTIEPYLITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVI 72

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ++G+GKSGH+G K+++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+ 
Sbjct: 73  LSGMGKSGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEIL 132

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++   + F   +IAIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDA
Sbjct: 133 KLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDA 192

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LAIA++  R F  NDF   HPGG LG   +     +   D    V++       I  ++ 
Sbjct: 193 LAIAMIRQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITS 251

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAM 306
              G V V D    L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A 
Sbjct: 252 GCQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAE 311

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +++H +S L+V +   K  G+V   D
Sbjct: 312 EKMQKHRVSTLLVTNKANKVTGLVRIFD 339


>gi|39546349|ref|NP_461759.2| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56414790|ref|YP_151865.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|168230896|ref|ZP_02655954.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|168820476|ref|ZP_02832476.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|194442564|ref|YP_002042079.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194472707|ref|ZP_03078691.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197363718|ref|YP_002143355.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56129047|gb|AAV78553.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194401227|gb|ACF61449.1| gutQ protein [Salmonella enterica subsp. enterica serovar Newport
           str. SL254]
 gi|194459071|gb|EDX47910.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CVM29188]
 gi|197095195|emb|CAR60746.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|205334552|gb|EDZ21316.1| gutQ protein [Salmonella enterica subsp. enterica serovar Kentucky
           str. CDC 191]
 gi|205342952|gb|EDZ29716.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Weltevreden str. HI_N05-537]
 gi|312913856|dbj|BAJ37830.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087241|emb|CBY97006.1| Uncharacterized phosphosugar isomerase aq_1546 [Salmonella enterica
           subsp. enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321223391|gb|EFX48457.1| Glucitol operon GutQ protein [Salmonella enterica subsp. enterica
           serovar Typhimurium str. TN061786]
          Length = 321

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKLHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|152971565|ref|YP_001336674.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           pneumoniae MGH 78578]
 gi|238896162|ref|YP_002920898.1| D-arabinose 5-phosphate isomerase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|330007953|ref|ZP_08306125.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
 gi|150956414|gb|ABR78444.1| putative polysialic acid capsule expression protein [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|238548480|dbj|BAH64831.1| putative polysialic acid capsule expression protein [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
 gi|328535274|gb|EGF61764.1| arabinose 5-phosphate isomerase [Klebsiella sp. MS 92-3]
          Length = 321

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 185/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  ++   ++++ E +      S L   L   F  A E I   +G+++++GIGKSGHI
Sbjct: 1   MSNFLLEAGRQTLMLELQE----ASRLPERLGDDFIRAAETIIHCEGKLIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T ASTGTP+FFVH AEA HGDLGM+   D+++ +S+SGS+ EL  I+       
Sbjct: 57  GKKLAATFASTGTPAFFVHPAEALHGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPL+A+T ++ S +A  A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IPLLAMTGKSTSPLALAAKAVLDIAVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   + +P V     ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDEEVPRVNTEANVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE  +++G+ T+GD+ R           V   M +N   +  D+    A + L +H IS 
Sbjct: 237 DEANRVQGVFTDGDLRRWLVAGGTLNDGVTRAMTRNGVTLQADSRAVEAKERLMKHKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  + +G ++  +  + GI+
Sbjct: 297 APVVDENGQLVGAINLQNFYQAGIL 321


>gi|254162893|ref|YP_003046001.1| hypothetical protein ECB_02814 [Escherichia coli B str. REL606]
 gi|297521100|ref|ZP_06939486.1| hypothetical protein EcolOP_25927 [Escherichia coli OP50]
 gi|242378497|emb|CAQ33281.1| kpsF [Escherichia coli BL21(DE3)]
 gi|253974794|gb|ACT40465.1| conserved hypothetical protein [Escherichia coli B str. REL606]
 gi|253978949|gb|ACT44619.1| conserved hypothetical protein [Escherichia coli BL21(DE3)]
          Length = 339

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 178/314 (56%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H  EA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPTEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|193213402|ref|YP_001999355.1| KpsF/GutQ family protein [Chlorobaculum parvum NCIB 8327]
 gi|193086879|gb|ACF12155.1| KpsF/GutQ family protein [Chlorobaculum parvum NCIB 8327]
          Length = 299

 Score =  315 bits (807), Expect = 7e-84,   Method: Composition-based stats.
 Identities = 122/299 (40%), Positives = 180/299 (60%), Gaps = 3/299 (1%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           +   L   F  AV+ +   KG+++I+G+GKSG IG K+A+TL+STGT + F+H AEA+HG
Sbjct: 1   MSERLDESFAKAVDLMLESKGKIIISGMGKSGIIGQKIAATLSSTGTTAVFMHPAEAAHG 60

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DLG++   D II LS SG ++EL  I+   R  +  +IA T   +S +A +A +VL    
Sbjct: 61  DLGVVCEGDTIICLSKSGMTEELNFIIPALRERNATIIAFTGNTRSYLAMNAHVVLDTGV 120

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDV 223
           E E+CP+ LAPTTS    LA+GDALAI L++ +NF++ +F + HP G LG    +   DV
Sbjct: 121 EQEACPYDLAPTTSTTAMLAMGDALAICLMKKKNFTDLEFALTHPKGSLGKQLTMRVGDV 180

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LN 281
           M +GD++PLV     + D I  ++ KR+G   VVD   KL GI T+GD+ R         
Sbjct: 181 MATGDALPLVSEDATVSDLILEITSKRYGVSGVVDAEGKLIGIFTDGDLRRLVQTGESFL 240

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +  +VM  NPK +  + +    ++LL    I+ LMV D+ Q+ +GIVH  DL+  G+
Sbjct: 241 DKTAAEVMTPNPKTVSAELMAKKCLELLETWRITQLMVCDEEQRPVGIVHIHDLVTLGL 299


>gi|296104382|ref|YP_003614528.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058841|gb|ADF63579.1| D-arabinose 5-phosphate isomerase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 321

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 125/325 (38%), Positives = 190/325 (58%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDFLLNAGRQTLMLELQE----ASRLPERLGDDFVRAANTIIQCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SGS+ EL  I+   +  S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +++S +A  A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKSRSPLALAAKAVLDIAVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M SGD+IP VK+   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRSGDAIPQVKLDTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ +++KG+ T+GD+ R           V + M      +  ++    A ++L +  I+ 
Sbjct: 237 DDTRQVKGVFTDGDLRRWLVGGGKLEARVSEAMTSGGLTLNANSRAIEAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVDD  +  G ++  D  + GII
Sbjct: 297 APVVDDAGRLCGAINLQDFYQAGII 321


>gi|194333248|ref|YP_002015108.1| KpsF/GutQ family protein [Prosthecochloris aestuarii DSM 271]
 gi|194311066|gb|ACF45461.1| KpsF/GutQ family protein [Prosthecochloris aestuarii DSM 271]
          Length = 323

 Score =  315 bits (807), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 123/313 (39%), Positives = 188/313 (60%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E   + +    + G L   F  AV  +   KG+V+++G+GKSG IG K+A+TLASTG
Sbjct: 15  LRQEAAAIEN----IAGLLRESFADAVFSMYNCKGKVIVSGMGKSGIIGQKIAATLASTG 70

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           T + F+H A+A+HGDLG++   D++I LS SG ++EL  IL       + +IAI    +S
Sbjct: 71  TTALFMHPADAAHGDLGVVNSGDIVICLSKSGLTEELNFILPALHHRGVTIIAIVGNPRS 130

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  A+IVL +    E+CP  LAPTTS    LA+GDALAI+L+  + F+ NDF + HP 
Sbjct: 131 FLAEKANIVLDVSVCQEACPFDLAPTTSTTAMLAMGDALAISLMREKQFTPNDFALTHPK 190

Query: 211 GKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG    +  +D+M SG ++PLV     + D I  ++ KRFG   V +   KL GI T+
Sbjct: 191 GSLGKQLTMKVADLMTSGKAVPLVTEEASVTDMILEMTSKRFGVSGVTNRDGKLSGIFTD 250

Query: 270 GDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GD+ R   +  D ++LS  DVM  +PK +  + L   ++++L  + I+ LMV D+ ++ +
Sbjct: 251 GDLRRLIQRGVDFSSLSALDVMSPSPKTVSANALAKTSLEMLETYRITQLMVCDNDERPV 310

Query: 328 GIVHFLDLLRFGI 340
           GI+H  DL+  G+
Sbjct: 311 GIIHIHDLVTQGL 323


>gi|170680699|ref|YP_001745202.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           SMS-3-5]
 gi|170518417|gb|ACB16595.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           SMS-3-5]
 gi|312947500|gb|ADR28327.1| Polysialic acid capsule expression protein [Escherichia coli O83:H1
           str. NRG 857C]
          Length = 339

 Score =  314 bits (806), Expect = 8e-84,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|154148842|ref|YP_001407261.1| carbohydrate isomerase KpsF/GutQ family protein [Campylobacter
           hominis ATCC BAA-381]
 gi|153804851|gb|ABS51858.1| carbohydrate isomerase, KpsF/GutQ family [Campylobacter hominis
           ATCC BAA-381]
          Length = 319

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 127/324 (39%), Positives = 192/324 (59%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  ++ A   +  E   L      +  E+      AV+ I   KG++V+TG+GKSGHIG+
Sbjct: 2   NEILKNAKDVLKLEADELIRHIDLIGNEI----EKAVKLILECKGKLVVTGVGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ASTGTPSFFVH  EA HGDLGMI+++DL++ +S+SG S+EL  IL + +RF + 
Sbjct: 58  KIAATMASTGTPSFFVHPTEALHGDLGMISKNDLVLAISYSGESEELIRILPHLKRFGVK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+     S +A  AD+ ++L    E+CP G APT S  + LA+GDALA+ L+  RNF 
Sbjct: 118 IIAMAKSPNSSLAKMADVFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMHERNFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         +   D +P+V     L  AI  ++  + G V +VD+ 
Sbjct: 178 KEDFANFHPGGSLGKRLFLKVSDVMRTDDLPIVSDDVSLKIAINTMTHGKLGNVLLVDKN 237

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISV 316
            +L  I+++GD+ R       D+N  +V +   KNPKVI   + L + A++++  + I +
Sbjct: 238 GELVAILSDGDLRRALMDENFDINNKAV-NFASKNPKVIDNPEMLASRALEIIENYKIQM 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L+VV    K IG +H  DL++ GI
Sbjct: 297 LIVV-RNNKPIGTLHIHDLMKIGI 319


>gi|227887642|ref|ZP_04005447.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|293406558|ref|ZP_06650484.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1412]
 gi|298382298|ref|ZP_06991895.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1302]
 gi|300900269|ref|ZP_07118448.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 198-1]
 gi|300973543|ref|ZP_07172257.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|301019378|ref|ZP_07183560.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 196-1]
 gi|7387830|sp|Q47334|KPSF5_ECOLX RecName: Full=Polysialic acid capsule expression protein kpsF
 gi|1212889|emb|CAA64561.1| kpsF [Escherichia coli]
 gi|47600692|emb|CAE55814.1| KpsF protein [Escherichia coli Nissle 1917]
 gi|227835038|gb|EEJ45504.1| arabinose-5-phosphate isomerase [Escherichia coli 83972]
 gi|291426564|gb|EFE99596.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1412]
 gi|298277438|gb|EFI18954.1| polysialic acid capsule expression protein kpsF [Escherichia coli
           FVEC1302]
 gi|299882251|gb|EFI90462.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 196-1]
 gi|300356159|gb|EFJ72029.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 198-1]
 gi|300410759|gb|EFJ94297.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|307555033|gb|ADN47808.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           ABU 83972]
 gi|315291285|gb|EFU50645.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 153-1]
          Length = 327

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQSAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|62181341|ref|YP_217758.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128974|gb|AAX66677.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|322715824|gb|EFZ07395.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 321

 Score =  314 bits (806), Expect = 9e-84,   Method: Composition-based stats.
 Identities = 126/325 (38%), Positives = 184/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L IGDALA+A++++R 
Sbjct: 117 VALLAMTGKPHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMIGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGTLGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+V
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITV 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENSKLTGAINLQDFYQAGII 321


>gi|91212354|ref|YP_542340.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           UTI89]
 gi|218560016|ref|YP_002392929.1| Polysialic acid capsule expression protein [Escherichia coli S88]
 gi|237706313|ref|ZP_04536794.1| polysialic acid capsule synthesis protein KpsF [Escherichia sp.
           3_2_53FAA]
 gi|91073928|gb|ABE08809.1| polysialic acid capsule synthesis protein KpsF [Escherichia coli
           UTI89]
 gi|218366785|emb|CAR04553.2| Polysialic acid capsule expression protein [Escherichia coli S88]
 gi|226899353|gb|EEH85612.1| polysialic acid capsule synthesis protein KpsF [Escherichia sp.
           3_2_53FAA]
 gi|307625457|gb|ADN69761.1| Polysialic acid capsule expression protein [Escherichia coli UM146]
          Length = 339

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|291515864|emb|CBK65074.1| KpsF/GutQ family protein [Alistipes shahii WAL 8301]
          Length = 321

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 113/319 (35%), Positives = 189/319 (59%), Gaps = 8/319 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   ++ A ++I  E   L  +E +L  E    F  AVE I   +G+ ++TG+GKSG +G
Sbjct: 6   KAQILEVARKAIHTEMLSLKRMEDTLGDE----FATAVEMILGSRGKCIVTGMGKSGLVG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA HGDLGMI+++D+++ LS+SG +DE+  I+ +      
Sbjct: 62  RKIAATLASTGTPSFFLHPGEAFHGDLGMISKEDIVVALSYSGETDEILKIVPFIHSNGN 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+++T    S +A ++D+ L +  + E+C   LAPT+S   Q+A+GDALA++L++ R F
Sbjct: 122 KLVSMTGNPDSALAKNSDVHLDVGVKEEACILHLAPTSSTTAQIAMGDALAVSLMQMRGF 181

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF  LHPGG LG   +     +     +P+V   CP  + I  +S+   G + +  E
Sbjct: 182 TSVDFARLHPGGSLGRRLLMTVGNVMRDHDLPVVAPDCPAAEMIHAISKGGLGLIVIC-E 240

Query: 260 GQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           G++++GI+T+GD+ R   +   +   +   D+  +NPK I  D  L  A +++ ++ ++ 
Sbjct: 241 GERIEGIVTDGDVRRAMERLRGEFFNIRASDIATRNPKTISPDEKLIEAEKMMTRNKVTS 300

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L+V D   K  G++   D+
Sbjct: 301 LLVTDAAGKLTGVIQIYDI 319


>gi|70608394|gb|AAZ04466.1| polysialic capsule transport protein [Escherichia coli]
          Length = 327

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 121/328 (36%), Positives = 184/328 (56%), Gaps = 6/328 (1%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           + +     S ++   +    +++  +   L +L   L    S Q+   +  I   KG V+
Sbjct: 4   RHLPDDQSSTIEPYLITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVI 60

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ++G+GKSGH+G K+++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+ 
Sbjct: 61  LSGMGKSGHVGRKMSATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEIL 120

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++   + F   +IAIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDA
Sbjct: 121 KLVPSLKNFGNRIIAITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDA 180

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LAIA++  R F  NDF   HPGG LG   +     +   D    V++       I  ++ 
Sbjct: 181 LAIAMIRQRKFMPNDFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITS 239

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAM 306
              G V V D    L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A 
Sbjct: 240 GCQGMVMVEDAEGGLAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAE 299

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +++H +S L+V +   K  G+V   D
Sbjct: 300 EKMQKHRVSTLLVTNKANKVTGLVRIFD 327


>gi|293394923|ref|ZP_06639213.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291422674|gb|EFE95913.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 323

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 130/322 (40%), Positives = 181/322 (56%), Gaps = 6/322 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            + +  A  ++  E        + L   L     CA E +   +G+ V++GIGKSGHIG 
Sbjct: 5   TALLNFARETLEIELAE----ATRLLERLDDNMVCACELLLNCRGKAVVSGIGKSGHIGK 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+FFVH AEA HGDLGMI +DD++I +S+SG + EL  IL       IP
Sbjct: 61  KIAATLASTGTPAFFVHPAEALHGDLGMIGKDDVVIFISYSGRAKELDLILPLLAENHIP 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAI+   +S +A  A  +L +  E E+CP GLAPT+SA+  L IGDALA+AL+  R F+
Sbjct: 121 LIAISGGKESPLATAAACLLDISVEREACPMGLAPTSSAVNTLMIGDALAMALMRQRGFN 180

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L      +M +GD +P VK    +++A+  LS    G VAV D 
Sbjct: 181 AEDFARSHPGGSLGARLLNRVHHLMRTGDRLPRVKESANVMEAMLELSRTGLGLVAVCDT 240

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLM 318
            QK+ G+ T+GD+ R   K  +        I  P   L +      A++ L + +IS   
Sbjct: 241 QQKVVGVFTDGDLRRWLVKGNSLNDALSPAITRPGYRLPEQWRAGEALEALHEQHISAAP 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD     +G ++  DL + GI
Sbjct: 301 VVDINGILVGAINLHDLHQAGI 322


>gi|146312821|ref|YP_001177895.1| D-arabinose 5-phosphate isomerase [Enterobacter sp. 638]
 gi|145319697|gb|ABP61844.1| KpsF/GutQ family protein [Enterobacter sp. 638]
          Length = 321

 Score =  314 bits (806), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 185/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    ++++ E +      S L   L   F  A   I   +G+V++ GIGKSGHI
Sbjct: 1   MSDFLLNTGRQTLMLELQE----ASRLPERLGDDFVRAANTIIQCEGKVIVAGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SGS+ EL  I+   +  S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGSAKELDLIIPRLQEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +++S +A  A   L +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKSRSPLALAAKATLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M + +++P VK+   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRTEEAVPQVKLSTSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R           V + M      +  ++    A ++L +  I+ 
Sbjct: 237 DETGLVKGVFTDGDLRRWLVGGGGLEAIVSEAMTAGGLTLNAESRAIEAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVDD  K  G ++  D  + GII
Sbjct: 297 APVVDDSGKLCGAINLQDFYQAGII 321


>gi|206580863|ref|YP_002236952.1| gutQ protein [Klebsiella pneumoniae 342]
 gi|288933908|ref|YP_003437967.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|290511011|ref|ZP_06550380.1| GutQ protein [Klebsiella sp. 1_1_55]
 gi|206569921|gb|ACI11697.1| gutQ protein [Klebsiella pneumoniae 342]
 gi|288888637|gb|ADC56955.1| KpsF/GutQ family protein [Klebsiella variicola At-22]
 gi|289776004|gb|EFD84003.1| GutQ protein [Klebsiella sp. 1_1_55]
          Length = 321

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 188/325 (57%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  ++   ++++ E +      S L   L   F  A E I   +G+++++GIGKSGHI
Sbjct: 1   MSNFLLEAGRQTLMLELQE----ASRLPERLGDDFIRAAETIIHCEGKLIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T ASTGTP+FFVH AEA HGDLGM+   D+++ +S+SGS+ EL  I+      S
Sbjct: 57  GKKLAATFASTGTPAFFVHPAEALHGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPL+A+T ++ S +A  A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IPLLAMTGKSTSPLALAAKAVLDIAVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   + +P V  G  ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDEEVPRVDAGANVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE  +++G+ T+GD+ R          SV   M +N   +  ++    A + L +H IS 
Sbjct: 237 DETNRVQGVFTDGDLRRWLVAGGTLNDSVTRAMTRNGVTLQAESRAVEAKERLMKHKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  + +G ++  +  + GI+
Sbjct: 297 APVVDENGQLVGAINLQNFYQAGIL 321


>gi|116621618|ref|YP_823774.1| KpsF/GutQ family protein [Candidatus Solibacter usitatus Ellin6076]
 gi|116224780|gb|ABJ83489.1| KpsF/GutQ family protein [Candidatus Solibacter usitatus Ellin6076]
          Length = 339

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 127/321 (39%), Positives = 179/321 (55%), Gaps = 9/321 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N  +  A  ++  E   ++     L GEL      AVE I A  G+VV+TGIGKSGHI 
Sbjct: 18  ENEWLAAARAAMRIEAESIARAAERLDGEL----VRAVELILAHPGKVVVTGIGKSGHIA 73

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STGT + F+H AEA+HGDLG+ T  D  IV+S +G+S EL++++   R+F  
Sbjct: 74  RKIVATLCSTGTAAVFLHPAEAAHGDLGIYTPGDPTIVISKNGASSELQSLVPMLRQFRS 133

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PL+ I     S +    D++L    E E+ PH LAPT SA+  LA+G ALAIAL+ +RNF
Sbjct: 134 PLVGILGNAHSPLGAEVDVLLDASVEREADPHNLAPTASAVTALALGHALAIALMCARNF 193

Query: 200 SENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  +F   HPGG+LG        + MH  D +  V  G  L D I  ++ K  G   VV 
Sbjct: 194 TPEEFGKFHPGGQLGRNLRLSVREAMHGADEVAFVAPGAALKDVIIAMTRKPMGGACVVA 253

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--I 314
           E   L G IT+GD+ R    H D+  L+  + M   P  I  +  L  A++L+ +    I
Sbjct: 254 EAGVLAGFITDGDLRRALTNHDDIRGLTAAEAMTARPVTIGPEATLGQALELMERRRSQI 313

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           SVL VVD   +A+G+V   D+
Sbjct: 314 SVLPVVDGDGRALGVVRIHDI 334


>gi|161950056|ref|YP_404426.2| D-arabinose 5-phosphate isomerase [Shigella dysenteriae Sd197]
 gi|309786211|ref|ZP_07680839.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
 gi|308925956|gb|EFP71435.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 1617]
          Length = 321

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFFRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+I+ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVILFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARFHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|300935339|ref|ZP_07150342.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
 gi|300459431|gb|EFK22924.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
          Length = 327

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQCAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|319789444|ref|YP_004151077.1| KpsF/GutQ family protein [Thermovibrio ammonificans HB-1]
 gi|317113946|gb|ADU96436.1| KpsF/GutQ family protein [Thermovibrio ammonificans HB-1]
          Length = 277

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 121/276 (43%), Positives = 175/276 (63%), Gaps = 2/276 (0%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +V+TG+GKSG +  K+A+TLASTGTP+FF+H  +A+HGDLGM+  +D +I +S SG + E
Sbjct: 1   MVLTGVGKSGLVCKKIAATLASTGTPAFFLHPTDAAHGDLGMLKGEDTVIAVSNSGETAE 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L +I+   + F IP+IAITS  +S +A  AD+ + L  E E+CP  LAPT+S    LA+G
Sbjct: 61  LLSIIPLIKSFGIPVIAITSNPESTLAKVADVTINLGVEKEACPLNLAPTSSTTATLALG 120

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALA AL++ + F+  DF  LHPGGKLG       ++MH G  +P V     L +AI  +
Sbjct: 121 DALAAALVKVKGFTSEDFARLHPGGKLGVRLARVKELMHKGGEVPQVPPEATLKEAIIEM 180

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVA 305
           S K+ G   V D G++L GI T+GD+ R   +  +    ++++M +NPK I ED     A
Sbjct: 181 SAKKLGATLVKD-GERLLGIFTDGDLRRALERGADLNTPIKEIMTENPKTIREDAFGEEA 239

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++L+  H I+VL VVD   +  GIVH  D+L   I+
Sbjct: 240 LRLMELHKITVLPVVDGEGRVTGIVHLHDILGRRIL 275


>gi|194436836|ref|ZP_03068936.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           101-1]
 gi|194424318|gb|EDX40305.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           101-1]
          Length = 327

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNENSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|149276387|ref|ZP_01882531.1| sugar phosphate isomerase, KpsF/GutQ family protein [Pedobacter sp.
           BAL39]
 gi|149232907|gb|EDM38282.1| sugar phosphate isomerase, KpsF/GutQ family protein [Pedobacter sp.
           BAL39]
          Length = 321

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/324 (38%), Positives = 191/324 (58%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K S +  A+ ++  E + +  L  ++  +    F   VE I A  GR+++TGIGKS  I 
Sbjct: 4   KKSIIAAAVNTLQLEAQSILGLIPNINDD----FVKIVELILACNGRIIVTGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +T  STGTPS F+HAA+A HGDLGMI ++D++I +S SG++ E+K +    ++   
Sbjct: 60  QKIVATFNSTGTPSIFMHAADAVHGDLGMIQKNDIVICISKSGNTPEIKVLAPLLKQSGN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++ +  +  S +A  +D +L    + E+CP+ LAPTTS   QLA+GDALA+ LL +R+F
Sbjct: 120 VMVGMIGQVNSDLARLSDFLLNTTVDKEACPNNLAPTTSTTAQLAMGDALAVCLLHARDF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF   HPGG LG      +  +   ++ P +     + D I  +S+ R G V VV E
Sbjct: 180 NEKDFARYHPGGSLGKRLYLKTGDLALKNAKPSIAPDAAVKDVIVEISQNRLGAVVVV-E 238

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              + G+IT+GDI R   K  DL  +   D+M +NPK I +D L   A++L++++NI+ L
Sbjct: 239 SNAILGVITDGDIRRMLEKHTDLTNIKASDLMNRNPKKIEKDVLAVGALELIKENNITQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +V D      GI+H  DLL+ GII
Sbjct: 299 LVTD-AGAYFGIIHLHDLLQEGII 321


>gi|326571102|gb|EGE21126.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC7]
          Length = 339

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 128/334 (38%), Positives = 201/334 (60%), Gaps = 6/334 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
              +  K ++L  +  +Q A+ +I  E+R L  L   L       F  A + I    GRV
Sbjct: 10  MNEMAMKQNNLAPSDYIQDAIDAIRTEQRALELLIDELDER----FVNACQTILNCSGRV 65

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+TG+GKSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE+
Sbjct: 66  VVTGMGKSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEI 125

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           + +L   ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GD
Sbjct: 126 RMLLPVVKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGD 185

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALL +R F+ +DF + HP G LG   +     +   D +P+V     L + + +++
Sbjct: 186 ALAVALLHARGFTSHDFALSHPAGALGRRLLMRVSDIMHTDHLPVVHHQSSLNETLLVMT 245

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAM 306
             R G   VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+
Sbjct: 246 SGRLGLAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDAL 305

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+ ++ IS L+V+   ++ IG++   D+L+ GI
Sbjct: 306 SLMNENAISQLLVL-KDRQLIGVISIHDILKAGI 338


>gi|170765600|ref|ZP_02900411.1| gutQ protein [Escherichia albertii TW07627]
 gi|170124746|gb|EDS93677.1| gutQ protein [Escherichia albertii TW07627]
          Length = 321

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 ITLLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M S D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRSDDAIPQVALNASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ Q +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQQLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|118340596|gb|ABK80646.1| putative KpsF/GutQ [uncultured marine Nitrospinaceae bacterium]
          Length = 338

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/331 (37%), Positives = 188/331 (56%), Gaps = 8/331 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              +    S ++ A + +  E   ++ L       +  QF   V  +   K  +VITG+G
Sbjct: 13  SAENQDAQSIIETARKVLDIESLAIAEL----GNRIDDQFVNVVHHLNQCK-HLVITGVG 67

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSG IG K++ST +S G PS F+HA+EASHGDLGMI+  D +I +S SG +DE+  +L  
Sbjct: 68  KSGLIGKKISSTFSSIGLPSLFLHASEASHGDLGMISEGDTVIAISNSGETDEVVKLLPI 127

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             R    L+ +T   +S +A  +D VL +  + E+C   L PT S    LA+GDALA+A 
Sbjct: 128 FNRIKCTLVGMTGNMQSSLAKRSDYVLDVSVKVEACSKDLVPTASTTATLAMGDALAMAF 187

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           +E R   E DF + HPGG LG   +    D+MHSG+ IP +K    +   +  +S+KR G
Sbjct: 188 MELRGVQEEDFALNHPGGNLGRKLLTLVDDLMHSGEDIPRIKEDADIYQVLKEISQKRLG 247

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              VV +  +L GIIT+GD+ R     KD++    +++M   PK I  DTL T A+++++
Sbjct: 248 MTLVVGDQGQLLGIITDGDLRRLIEKQKDISQSCAKNMMGGKPKTITRDTLATKAVRVMQ 307

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            H I+ L V+ D +K  GI+H  D+L+ G++
Sbjct: 308 DHAITSLAVISDDRKIEGIIHLHDILKAGVV 338


>gi|191171856|ref|ZP_03033402.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           F11]
 gi|256024471|ref|ZP_05438336.1| polysialic acid capsule expression protein KpsF [Escherichia sp.
           4_1_40B]
 gi|300931822|ref|ZP_07147119.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 187-1]
 gi|301326832|ref|ZP_07220132.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 78-1]
 gi|331659223|ref|ZP_08360165.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA206]
 gi|331664557|ref|ZP_08365463.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA143]
 gi|190907891|gb|EDV67484.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           F11]
 gi|222034662|emb|CAP77404.1| hypothetical protein LF82_461 [Escherichia coli LF82]
 gi|281179981|dbj|BAI56311.1| polysialic capsule transport protein KpsF [Escherichia coli SE15]
 gi|300460245|gb|EFK23738.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 187-1]
 gi|300846507|gb|EFK74267.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 78-1]
 gi|315297684|gb|EFU56961.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 16-3]
 gi|323978983|gb|EGB74063.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
 gi|324011893|gb|EGB81112.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 60-1]
 gi|331053805|gb|EGI25834.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA206]
 gi|331058488|gb|EGI30469.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           TA143]
          Length = 327

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|300923597|ref|ZP_07139626.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 182-1]
 gi|300420114|gb|EFK03425.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 182-1]
 gi|323971786|gb|EGB67012.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
          Length = 327

 Score =  314 bits (805), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L      Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLDP---VQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L  E E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMENETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V +       I  ++    G V V D   +
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VHLDASFKTVIQRITSGCQGMVMVEDAEGE 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + E+T++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEETMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|167994139|ref|ZP_02575231.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|205327945|gb|EDZ14709.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           4,[5],12:i:- str. CVM23701]
 gi|267994958|gb|ACY89843.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301159398|emb|CBW18916.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|323131189|gb|ADX18619.1| gutQ protein [Salmonella enterica subsp. enterica serovar
           Typhimurium str. 4/74]
          Length = 321

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 124/325 (38%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 VALLAMTGKLHSPLGRAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M  GD+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DE   +KG+ T+GD+ R        T  V + M  N   +   +    A +LL +  I+ 
Sbjct: 237 DEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGITLQAKSRAIDAKELLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|26988536|ref|NP_743961.1| KpsF/GutQ family protein [Pseudomonas putida KT2440]
 gi|24983305|gb|AAN67425.1|AE016369_10 KpsF/GutQ family protein [Pseudomonas putida KT2440]
          Length = 317

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 122/318 (38%), Positives = 184/318 (57%), Gaps = 8/318 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + +  A  +++A+ + ++ L   L G    QF  AV+ I A +GR V+ G+GKSG I
Sbjct: 1   MKMNHLDIAKEALVAQAQAVAKLADRLDG----QFQSAVDLILACEGRTVVCGMGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T ASTGTPSFF+H AEA HGDLGM+   D+++++S+SG ++EL  ++   + F 
Sbjct: 57  GKKMVATFASTGTPSFFLHPAEAFHGDLGMLKPVDVLVLISYSGETEELIKLIPSLKSFG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              IA+T    S +A HADI L +  + E CP+ LAPTTS +  +A+GDALA+AL+ +  
Sbjct: 117 NKFIAMTGSGNSTLAKHADIWLDISVDREVCPNNLAPTTSTLATMAMGDALAVALITANQ 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGG LG   +     +      P+V       D + ++++ R G   V+D
Sbjct: 177 FKPMDFARYHPGGSLGRKLLTRVADVM-HSPAPIVSPASSFQDCLLMMTQSRLGLAMVMD 235

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            G +L GI+T+GD+ R   K+  +   SV + M  NP  I  D  ++VA   + ++ I  
Sbjct: 236 -GNELVGIVTDGDLRRALLKNNQVIHASVTEFMTLNPHTIPADCRVSVAEAYMLENKIRA 294

Query: 317 LMVVDDCQKAIGIVHFLD 334
           L VVDDC   +G+V   D
Sbjct: 295 LAVVDDCGAIVGVVEIFD 312


>gi|294493943|gb|ADE92699.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           IHE3034]
 gi|315288737|gb|EFU48135.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 110-3]
 gi|323957572|gb|EGB53287.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
          Length = 327

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|262043959|ref|ZP_06017043.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259038685|gb|EEW39872.1| arabinose 5-phosphate isomerase [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 321

 Score =  314 bits (804), Expect = 1e-83,   Method: Composition-based stats.
 Identities = 120/325 (36%), Positives = 185/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  ++   ++++ E +      S L   L   F  A E I   +G+++++GIGKSGHI
Sbjct: 1   MSNFLLEAGRQTLMLELQE----ASRLPKRLGDDFIRAAETIIHCEGKLIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T ASTGTP+FFVH AEA HGDLGM+   D+++ +S+SGS+ EL  I+       
Sbjct: 57  GKKLAATFASTGTPAFFVHPAEALHGDLGMLDSRDVMLFISYSGSAKELDLIVPRLEEKG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IPL+A+T ++ S +A  A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IPLLAMTGKSTSPLALAAKAVLDIAVEREACPMHLAPTSSTVNTLMLGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   + +P V     ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDEEVPRVNTEANVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+  +++G+ T+GD+ R           V   M +N   +  D+    A + L +H IS 
Sbjct: 237 DKANRVQGVFTDGDLRRWLVAGGTLNDGVTRAMTRNGVTLQADSRAVEAKERLMKHKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  + +G ++  +  + GI+
Sbjct: 297 APVVDENGQLVGAINLQNFYQAGIL 321


>gi|225873294|ref|YP_002754753.1| sugar isomerase, KpsF/GutQ family [Acidobacterium capsulatum ATCC
           51196]
 gi|225792081|gb|ACO32171.1| sugar isomerase, KpsF/GutQ family [Acidobacterium capsulatum ATCC
           51196]
          Length = 331

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 116/295 (39%), Positives = 169/295 (57%), Gaps = 7/295 (2%)

Query: 47  GELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           G +   F  AVE + A    +GRVV+TG+GKSG I  K+A+TL+STGTP+ F+H AEA H
Sbjct: 32  GPMQAAFERAVETVIACGRDRGRVVVTGMGKSGLIAQKIAATLSSTGTPALFLHPAEAVH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLGMI R D+++ LS SG ++E+  +L   +R    L++      S +A  +D+ L + 
Sbjct: 92  GDLGMIARGDVVLALSASGETEEILRLLATLKRMGDALLSFCCNLNSTLAGASDVALDVS 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
              E+C  GLAPT S    LA+GDALAIA+   + F   DF  LHPGGKLG       ++
Sbjct: 152 VPGEACDLGLAPTASTTAMLALGDALAIAVSMRKGFRAEDFAELHPGGKLGKRLARVHEL 211

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---L 280
           MH+G+++P V    P+ D I  +S K  G   VV E  +L GI+++GD+ R    +    
Sbjct: 212 MHAGEALPRVTPATPMKDVIYEMSRKGLGMTTVV-EDGRLAGILSDGDLRRLLEHEGAAC 270

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  +VM   P++I    L   A+  + +  I+ L+VVDD     G++H  DL
Sbjct: 271 LDKTAAEVMNPRPQIIAPGELAARALHRMEERKITSLVVVDDAGVLQGVLHLHDL 325


>gi|332291026|ref|YP_004429635.1| KpsF/GutQ family protein [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169112|gb|AEE18367.1| KpsF/GutQ family protein [Krokinobacter diaphorus 4H-3-7-5]
          Length = 321

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 125/322 (38%), Positives = 185/322 (57%), Gaps = 8/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +  A ++I  E+  +++L S +  E    F  AV+ I   KGRVVITGIGKS  I  
Sbjct: 5   QQIIASAQKTIHIEQTAIANLSSLIDEE----FAQAVQAIYKSKGRVVITGIGKSAIIAQ 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGTP+ F+HAA+A HGDLG I  DD++I +S SG++ E+K ++   ++    
Sbjct: 61  KIVATLNSTGTPALFMHAADAIHGDLGSILIDDIVICISKSGNTPEIKVLVPLIKKTENT 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIAIT+   S +   AD +L    E E+CP+ LAPTTS  +QL +GDA+A+ALL+ R F+
Sbjct: 121 LIAITANRDSFLGKEADYILHANTEEEACPNNLAPTTSTTVQLVLGDAVAVALLDLRGFT 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           E+DF   HPGG LG         + +    P V     + + I  ++ K  G  AVV   
Sbjct: 181 ESDFARYHPGGSLGKRLYLTVHDICATHENPQVTPDASIKEVIIEITNKMLGVTAVV-LN 239

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             ++GIIT+GD+ R   K+  L+ L+   +M   PK +  D +   A ++L  HNI+ L+
Sbjct: 240 GVIQGIITDGDLRRMLSKNDSLDGLTAAAIMSATPKTVRHDAMAIDAKEILEAHNITQLL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V +      G+VH  DL++ GI
Sbjct: 300 V-EKDGNYAGVVHIHDLIKEGI 320


>gi|294673206|ref|YP_003573822.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
 gi|294473357|gb|ADE82746.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
          Length = 315

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/307 (39%), Positives = 184/307 (59%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++    E + +  L   L  +    F  AV  I   KGR VITG+GKSGHIG+K+A+TL
Sbjct: 8   AIKCFQDEAQAILDLIPLLTDD----FSKAVNLIYNCKGRFVITGVGKSGHIGAKIAATL 63

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           ASTGTPSFFV+  +A HGDLGM T DD+++ +S SG++DEL   +      +IP+I ++ 
Sbjct: 64  ASTGTPSFFVNPLDAFHGDLGMFTSDDVVLAISNSGNTDELLRFIPLLLERNIPIIGMSG 123

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S++A ++   L +  + E+ P  LAPT+S    LA+GDALA AL+E R+F   DF  
Sbjct: 124 NPESLLAQYSTCHLNIKVKREADPLNLAPTSSTTATLAMGDALACALIEIRHFRPEDFAQ 183

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG LG   +          ++P+V +   + + I  +S+ + G    VD   K+ G+
Sbjct: 184 FHPGGSLGKRLLTKVKNAMVSTNLPIVTLDQKISETIIEISKTKQGIAVAVD-NGKIAGV 242

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+GD+ R           L+V++VM  NPKV+ E+  L+ A +++RQ+NI  L+VV+D 
Sbjct: 243 VTDGDVRRAMQSKQDIFFELTVKEVMSCNPKVVSENAKLSDAEKMMRQYNIHSLVVVNDT 302

Query: 324 QKAIGIV 330
           Q+ +GI+
Sbjct: 303 QEFVGII 309


>gi|301047599|ref|ZP_07194667.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|300300509|gb|EFJ56894.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
          Length = 327

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 178/314 (56%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L   +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTFATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|288572977|ref|ZP_06391334.1| KpsF/GutQ family protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288568718|gb|EFC90275.1| KpsF/GutQ family protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 335

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 121/324 (37%), Positives = 194/324 (59%), Gaps = 9/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              V+   + ++ E   +    S +  EL      A   ++  +GR+VI+G+GKSGHIG 
Sbjct: 16  EKLVEIGRQVLLEEAEEIKKAASRMGPEL----AKAARIVQGCRGRLVISGLGKSGHIGR 71

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLAS GTPSFF+HAAEA+HGDLGM+ R+D+  ++S SG++ E+  ++ + RR   P
Sbjct: 72  KIAATLASLGTPSFFLHAAEAAHGDLGMVRREDVAFLISHSGTTSEVVKLIPFFRRLGAP 131

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T   +S +A  AD++L    E E+ P  LAPT+S  +QLAIGDALA  + E R   
Sbjct: 132 VIALTGSLESPLAKGADVILNASVEREADPLNLAPTSSTTVQLAIGDALAGVVTEMRCLR 191

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + DF + HP G LG    +  SDVM +G  +P+VK    + +A+  ++ K +G   VVD+
Sbjct: 192 KEDFALFHPAGALGRQLLLKVSDVMGAGPKLPVVKADVAVKEALFEITSKNYGATTVVDD 251

Query: 260 GQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              L G+ T+GD+ R   +        ++ DVM   P+ I  D L   A+++++   +SV
Sbjct: 252 QGILVGVFTDGDLRRLIERQGVSALEENISDVMTVGPRTIGPDHLAVEAVRIMQDVEVSV 311

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L++ ++  + +G+VH  +LL+ G+
Sbjct: 312 LIITEED-RPVGMVHLHELLQAGL 334


>gi|161984873|ref|YP_409164.2| D-arabinose 5-phosphate isomerase [Shigella boydii Sb227]
 gi|170019046|ref|YP_001724000.1| D-arabinose 5-phosphate isomerase [Escherichia coli ATCC 8739]
 gi|188492755|ref|ZP_03000025.1| gutQ protein [Escherichia coli 53638]
 gi|193069687|ref|ZP_03050639.1| gutQ protein [Escherichia coli E110019]
 gi|218706202|ref|YP_002413721.1| D-arabinose 5-phosphate isomerase [Escherichia coli UMN026]
 gi|256019515|ref|ZP_05433380.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|260856813|ref|YP_003230704.1| putative phosphosugar-binding protein [Escherichia coli O26:H11
           str. 11368]
 gi|260869381|ref|YP_003235783.1| putative phosphosugar-binding protein [Escherichia coli O111:H-
           str. 11128]
 gi|293406199|ref|ZP_06650125.1| gutQ [Escherichia coli FVEC1412]
 gi|293412063|ref|ZP_06654786.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298381936|ref|ZP_06991533.1| gutQ [Escherichia coli FVEC1302]
 gi|300820482|ref|ZP_07100633.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           119-7]
 gi|300899944|ref|ZP_07118149.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           198-1]
 gi|300906795|ref|ZP_07124476.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300919266|ref|ZP_07135784.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           115-1]
 gi|301027068|ref|ZP_07190443.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|301305407|ref|ZP_07211501.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           124-1]
 gi|307314407|ref|ZP_07594012.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|312973083|ref|ZP_07787256.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|331664259|ref|ZP_08365165.1| protein GutQ [Escherichia coli TA143]
 gi|331669440|ref|ZP_08370286.1| protein GutQ [Escherichia coli TA271]
 gi|331674216|ref|ZP_08374976.1| protein GutQ [Escherichia coli TA280]
 gi|331678680|ref|ZP_08379354.1| protein GutQ [Escherichia coli H591]
 gi|332280638|ref|ZP_08393051.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
 gi|169753974|gb|ACA76673.1| KpsF/GutQ family protein [Escherichia coli ATCC 8739]
 gi|188487954|gb|EDU63057.1| gutQ protein [Escherichia coli 53638]
 gi|192957050|gb|EDV87501.1| gutQ protein [Escherichia coli E110019]
 gi|218433299|emb|CAR14199.1| putative phosphosugar-binding protein [Escherichia coli UMN026]
 gi|257755462|dbj|BAI26964.1| predicted phosphosugar-binding protein [Escherichia coli O26:H11
           str. 11368]
 gi|257765737|dbj|BAI37232.1| predicted phosphosugar-binding protein [Escherichia coli O111:H-
           str. 11128]
 gi|284922644|emb|CBG35732.1| D-arabinose 5-phosphate isomerase [Escherichia coli 042]
 gi|291426205|gb|EFE99237.1| gutQ [Escherichia coli FVEC1412]
 gi|291468834|gb|EFF11325.1| conserved hypothetical protein [Escherichia coli B354]
 gi|298277076|gb|EFI18592.1| gutQ [Escherichia coli FVEC1302]
 gi|300356512|gb|EFJ72382.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           198-1]
 gi|300395212|gb|EFJ78750.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 69-1]
 gi|300401396|gb|EFJ84934.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 84-1]
 gi|300413637|gb|EFJ96947.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           115-1]
 gi|300526746|gb|EFK47815.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           119-7]
 gi|300839327|gb|EFK67087.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           124-1]
 gi|306905975|gb|EFN36496.1| KpsF/GutQ family protein [Escherichia coli W]
 gi|310333025|gb|EFQ00239.1| arabinose 5-phosphate isomerase [Escherichia coli 1827-70]
 gi|315061984|gb|ADT76311.1| arabinose-5-phosphate isomerase [Escherichia coli W]
 gi|315254484|gb|EFU34452.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 85-1]
 gi|320180872|gb|EFW55795.1| Glucitol operon GutQ protein [Shigella boydii ATCC 9905]
 gi|320186494|gb|EFW61222.1| Glucitol operon GutQ protein [Shigella flexneri CDC 796-83]
 gi|323154919|gb|EFZ41111.1| arabinose 5-phosphate isomerase [Escherichia coli EPECa14]
 gi|323173010|gb|EFZ58641.1| arabinose 5-phosphate isomerase [Escherichia coli LT-68]
 gi|323180126|gb|EFZ65678.1| arabinose 5-phosphate isomerase [Escherichia coli 1180]
 gi|323377434|gb|ADX49702.1| KpsF/GutQ family protein [Escherichia coli KO11]
 gi|331058190|gb|EGI30171.1| protein GutQ [Escherichia coli TA143]
 gi|331063108|gb|EGI35021.1| protein GutQ [Escherichia coli TA271]
 gi|331068310|gb|EGI39705.1| protein GutQ [Escherichia coli TA280]
 gi|331073510|gb|EGI44831.1| protein GutQ [Escherichia coli H591]
 gi|332087426|gb|EGI92554.1| arabinose 5-phosphate isomerase [Shigella boydii 5216-82]
 gi|332091809|gb|EGI96887.1| arabinose 5-phosphate isomerase [Shigella boydii 3594-74]
 gi|332102990|gb|EGJ06336.1| D-arabinose 5-phosphate isomerase [Shigella sp. D9]
          Length = 321

 Score =  314 bits (804), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|170720579|ref|YP_001748267.1| KpsF/GutQ family protein [Pseudomonas putida W619]
 gi|169758582|gb|ACA71898.1| KpsF/GutQ family protein [Pseudomonas putida W619]
          Length = 310

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/316 (37%), Positives = 180/316 (56%), Gaps = 10/316 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  +++A+ + + +L   L       F  AVE + + KGR V+ G+GKSG IG K
Sbjct: 2   NHLSIAKEALLAQAKAVETLAERLN----ESFQRAVELLLSCKGRAVVCGMGKSGLIGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H AEA HGDLGM+   D++I++S+SG ++EL  ++   + F   L
Sbjct: 58  MVATFASTGTPSFFLHPAEAFHGDLGMLKPVDVLILISYSGETEELIKLIPSLKSFGNKL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+IT    S +A H+DI L +  E E CP+ LAPTTS +  +A+GDALA+AL+E+  F  
Sbjct: 118 ISITGNGTSTLAKHSDIWLDISVEREVCPNNLAPTTSTLATMAMGDALAVALIEAIQFKP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HPGG LG        DVMHS    P+V       D +  +++ R G   V++E 
Sbjct: 178 MDFARYHPGGSLGRKLLTRVKDVMHS--PAPIVGRETSFHDCLLAMTQSRLGLAIVMEEQ 235

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI+T+GD+ R   ++  +    V   M   P  I+ED  L+ A   +R++ I  L 
Sbjct: 236 -RLVGIVTDGDLRRALLENERIVREKVAQFMTAKPHTIMEDAQLSEAELYMRENKIRALA 294

Query: 319 VVDDCQKAIGIVHFLD 334
           V +     +G+V   D
Sbjct: 295 VTNSQGGVVGVVEIFD 310


>gi|149372420|ref|ZP_01891608.1| sugar phosphate isomerase, KpsF/GutQ family protein [unidentified
           eubacterium SCB49]
 gi|149354810|gb|EDM43373.1| sugar phosphate isomerase, KpsF/GutQ family protein [unidentified
           eubacterium SCB49]
          Length = 321

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 125/323 (38%), Positives = 187/323 (57%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           NS ++ A ++I+AE + + +L S +       F  AV  I    GRV++TGIGKS +I +
Sbjct: 5   NSIIKNAKQTILAEAKAIENLASLV----DDSFAQAVTAILQSSGRVIVTGIGKSANIAT 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +TL STGTP+ F+HAA+A HGDLG I  DD +I +S SG++ E+K ++   +     
Sbjct: 61  KIVATLNSTGTPAIFMHAADAIHGDLGTIQEDDTVICISKSGNTPEIKVLVPLIKARKNK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IAITS  +S +   AD +L    E E+CP+ LAPTTS   QL +GDALA+ LLE R F+
Sbjct: 121 IIAITSNKESFLGEQADFILNAYIEKEACPNNLAPTTSTTAQLVMGDALAVCLLELRGFT 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG         + S + +P V    PL + I  +S+K  G  AV+D  
Sbjct: 181 SKDFAKYHPGGSLGKQLYLRVSDLTSLNELPQVAPETPLKEVIIEISKKMLGVTAVIDAD 240

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            K+ GIIT+GD+ R   K   +  L+ +D+M KNPK+I  + +   A  ++  + I+ ++
Sbjct: 241 -KIVGIITDGDLRRMLTKVDSMAGLTAKDIMTKNPKLIDNNAMAVEASAIMESNGITQIL 299

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
                    G+VH  +L + GI+
Sbjct: 300 -AHSEGIYKGVVHIHNLTKEGIL 321


>gi|331648725|ref|ZP_08349813.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
 gi|331042472|gb|EGI14614.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
          Length = 339

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 180/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA+++ R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIQQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMLHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|320197711|gb|EFW72320.1| Glucitol operon GutQ protein [Escherichia coli EC4100B]
          Length = 321

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH +EA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPSEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|213855735|ref|ZP_03383975.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 274

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 119/275 (43%), Positives = 170/275 (61%), Gaps = 4/275 (1%)

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSGHIG K+A+T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A
Sbjct: 1   MGMGKSGHIGRKMAATFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAA 60

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++   +R  +PLI IT   +S +A  AD+ L +    E+CP GLAPT+S    L +GDAL
Sbjct: 61  LIPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDAL 120

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           A+ALL++R F+  DF + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ 
Sbjct: 121 AVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITR 180

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           K  G   + DE  K+ GI T+GD+ R F    D+  L + +VM      +    L   A+
Sbjct: 181 KNLGMTVICDESMKIDGIFTDGDLRRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDAL 240

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L++  +I+ ++V D  Q  +G++H  DLLR G++
Sbjct: 241 NLMQSRHITSVLVADGDQ-LLGVLHMHDLLRAGVV 274


>gi|218691236|ref|YP_002399448.1| Polysialic acid capsule expression protein [Escherichia coli ED1a]
 gi|218428800|emb|CAR09744.2| Polysialic acid capsule expression protein [Escherichia coli ED1a]
          Length = 339

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMLHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|86149299|ref|ZP_01067530.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88596573|ref|ZP_01099810.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|218563047|ref|YP_002344826.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|85840081|gb|EAQ57339.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           CF93-6]
 gi|88191414|gb|EAQ95386.1| arabinose-5-phosphate isomerase [Campylobacter jejuni subsp. jejuni
           84-25]
 gi|112360753|emb|CAL35552.1| D-arabinose 5-phosphate isomerase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315927387|gb|EFV06725.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni DFVF1099]
 gi|315929842|gb|EFV09006.1| sugar isomerase, KpsF/GutQ family protein [Campylobacter jejuni
           subsp. jejuni 305]
          Length = 315

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 114/314 (36%), Positives = 181/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++ A      E + +  L ++L       F+ AV  +   KGR +++G+GKSGHIG+K
Sbjct: 2   NTLEIAKEVFEKEAQAILDLATNL----DENFNQAVNLMLNTKGRCIVSGMGKSGHIGAK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H  EA HGDLGM+T +D++I +S SG ++E+  I+   ++  IPL
Sbjct: 58  IAATLASTGTPSFFIHPGEALHGDLGMLTSEDVLIAISNSGETEEILKIIPAIKKREIPL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +  +  S +    DI L +  E E+CP  LAP +S    L +GDALA AL++ RNF  
Sbjct: 118 IVMCGKKNSTLVKQGDIFLNIAVEKEACPLQLAPMSSTTATLVMGDALAAALMKVRNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF + HPGG LG   +     +    ++P+V       D + +++  + G + VV E +
Sbjct: 178 DDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENE 236

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL GIIT+GD+ R      K       +++M  NPKV+  D + + A  ++ +H I   +
Sbjct: 237 KLVGIITDGDLRRALKASDKPRFDFKAKEIMSINPKVVDADAMASEAEGIMLKHKIKE-I 295

Query: 319 VVDDCQKAIGIVHF 332
           +V   +K +GI+  
Sbjct: 296 IVGKEEKVVGIIQL 309


>gi|161485808|ref|NP_708515.3| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 301]
 gi|161486447|ref|NP_838238.2| D-arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
 gi|281602077|gb|ADA75061.1| putative sugar phosphate isomerase involved in capsule formation
           [Shigella flexneri 2002017]
 gi|332753425|gb|EGJ83805.1| arabinose 5-phosphate isomerase [Shigella flexneri 4343-70]
 gi|332753933|gb|EGJ84308.1| arabinose 5-phosphate isomerase [Shigella flexneri K-671]
 gi|332765659|gb|EGJ95872.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 2930-71]
 gi|333000646|gb|EGK20223.1| arabinose 5-phosphate isomerase [Shigella flexneri K-218]
 gi|333015825|gb|EGK35161.1| arabinose 5-phosphate isomerase [Shigella flexneri K-304]
          Length = 321

 Score =  313 bits (803), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNTGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|296113130|ref|YP_003627068.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis RH4]
 gi|295920823|gb|ADG61174.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis RH4]
          Length = 325

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 128/328 (39%), Positives = 200/328 (60%), Gaps = 6/328 (1%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K ++L  +  +Q A+ +I  E+R L  L   L       F  A + I    GRVV+TG+G
Sbjct: 2   KQNNLAPSDYIQDAIDAIRTEQRALELLIDELDER----FVNACQTILNCSGRVVVTGMG 57

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE++ +L  
Sbjct: 58  KSGHIGRKIAATFASTGTPAFFIHPGEAGHGDLGMLVQGDVLIAISNSGESDEIRMLLPV 117

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GDALA+AL
Sbjct: 118 VKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGDALAVAL 177

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           L +R F+ +DF + HP G LG   +     +   D +P+V     L + + +++  R G 
Sbjct: 178 LHARGFTSHDFALSHPAGALGRRLLTRVSDIMHTDHLPVVHHQSSLNETLLVMTSGRLGL 237

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
             VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+ L+ ++
Sbjct: 238 AVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMRASDALSLMNEN 297

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            IS L+V+   ++ IG++   D+L+ GI
Sbjct: 298 AISQLLVL-KDRQLIGVISIHDILKAGI 324


>gi|305664749|ref|YP_003861036.1| hypothetical protein FB2170_00550 [Maribacter sp. HTCC2170]
 gi|88707871|gb|EAR00110.1| hypothetical protein FB2170_00550 [Maribacter sp. HTCC2170]
          Length = 321

 Score =  313 bits (802), Expect = 2e-83,   Method: Composition-based stats.
 Identities = 131/324 (40%), Positives = 186/324 (57%), Gaps = 8/324 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             + +  A ++I  E + + +L S L G     F   VE I   KGRVVITGIGKS  I 
Sbjct: 4   SETILNLAKKTIETESQAIGNLASLLDG----NFSKTVESILNSKGRVVITGIGKSAIIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+ +TL STGTP+ F+HA +A HGDLG I  DD++I +S SG++ E+K ++   +R S 
Sbjct: 60  TKIVATLNSTGTPAIFMHAGDAIHGDLGTIQEDDVVICISKSGNTPEIKMLVPLIKRGSN 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI +T    S +A  A   L    E E+CP+ LAPTTS   QL +GDALAI LLE + F
Sbjct: 120 ILIGMTGNISSFLAQQAHFNLNTFVEKEACPNNLAPTTSTSAQLVMGDALAICLLELKGF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S  DF   HPGG LG       D +   ++ P V +   +   I  +SEK  G  AV+ E
Sbjct: 180 SSKDFAKYHPGGALGKRLYLTVDDIVQINAKPQVSLDTDVRKVIVEISEKMLGVSAVIHE 239

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K+ G++T+GDI R  +K   +N L+ +D+M  NPK +    L  VA++L++   IS L
Sbjct: 240 N-KIVGVVTDGDIRRMLNKYDSINGLTAKDIMTSNPKTVDVSKLAVVALELMQDKGISQL 298

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           + V D +   G+VH  +L+  GI+
Sbjct: 299 LAVKDDEY-KGVVHLHNLINEGIL 321


>gi|238798999|ref|ZP_04642460.1| hypothetical protein ymoll0001_27960 [Yersinia mollaretii ATCC
           43969]
 gi|238717140|gb|EEQ08995.1| hypothetical protein ymoll0001_27960 [Yersinia mollaretii ATCC
           43969]
          Length = 299

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 126/295 (42%), Positives = 173/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFIRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A +A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGKESPLALNAACVLDISVEQE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPDQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L +      A++ L QH+IS   VV+   K +G ++  DL + GI
Sbjct: 244 AGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGAINLHDLHQAGI 298


>gi|326564163|gb|EGE14399.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis 12P80B1]
 gi|326570417|gb|EGE20457.1| arabinose 5-phosphate isomerase [Moraxella catarrhalis BC8]
          Length = 339

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 128/334 (38%), Positives = 201/334 (60%), Gaps = 6/334 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
              +  K ++L  +  +Q A+ +I  E+R L  L   L       F  A + I    GRV
Sbjct: 10  MNEMAMKQNNLAPSDYIQDAIDAIRTEQRALELLIDELDER----FVNACQTILNCSGRV 65

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           V+TG+GKSGHIG K+A+T ASTGTP+FF+H  EA HGDLGM+ + D++I +S SG SDE+
Sbjct: 66  VVTGMGKSGHIGRKIAATFASTGTPAFFMHPGEAGHGDLGMLVQGDVLIAISNSGESDEI 125

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           + +L   ++ +IPLI+I+ + + ++   ADI LTL    E+CP GLAPT+S    LA+GD
Sbjct: 126 RMLLPVVKQLNIPLISISRDKRGILPRSADIALTLGLSEEACPLGLAPTSSTTATLALGD 185

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+ALL +R F+ +DF + HP G LG   +     +   D +P+V     L + + +++
Sbjct: 186 ALAVALLHARGFTSHDFALSHPAGALGRRLLTRVSDIMHTDHLPVVHHQSSLNETLLVMT 245

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAM 306
             R G   VVD+  K+ GI T+GD+ R   +  N T+ ++ +M K PK + +    + A+
Sbjct: 246 SGRLGLAVVVDDDGKVVGIFTDGDLRRKLAEHTNLTVEIQTLMTKTPKSVDQQMHASDAL 305

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+ ++ IS L+V+   ++ IG++   D+L+ GI
Sbjct: 306 SLMNENAISQLLVL-KDRQLIGVISIHDILKAGI 338


>gi|325496251|gb|EGC94110.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ECD227]
          Length = 321

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSKALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVTLTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DVQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K +G ++  D  + GII
Sbjct: 297 APVVDENGKLVGAINLQDFYQAGII 321


>gi|157162154|ref|YP_001459472.1| D-arabinose 5-phosphate isomerase [Escherichia coli HS]
 gi|157067834|gb|ABV07089.1| gutQ protein [Escherichia coli HS]
          Length = 321

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    +++I E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLILELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|110643174|ref|YP_670904.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           536]
 gi|47155011|emb|CAE85210.1| KpsF protein [Escherichia coli]
 gi|110344766|gb|ABG71003.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           536]
          Length = 327

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + E+T++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEETMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|300993040|ref|ZP_07180148.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|300305164|gb|EFJ59684.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
          Length = 327

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AMTNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMLHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|320173440|gb|EFW48639.1| Glucitol operon GutQ protein [Shigella dysenteriae CDC 74-1112]
          Length = 321

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGSALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|145633353|ref|ZP_01789084.1| KpsF [Haemophilus influenzae 3655]
 gi|144986199|gb|EDJ92789.1| KpsF [Haemophilus influenzae 3655]
          Length = 311

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 121/314 (38%), Positives = 182/314 (57%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  S+  E   L  L   L  +    F+  ++ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLKIAQDSLSVESNALLQLSQRLGDD----FNQVIDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  IVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 118 IAMTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       + +T+++E R G   V+ E +
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTNCLTVMNEGRMGVALVM-ENE 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R    +       + +D M  +PK I +D  L+ A   ++   I  L+
Sbjct: 236 QLKGIITDGDIRRALTANGAETLNKTAKDFMASSPKTIHQDEFLSKAEDFMKAKKIHSLV 295

Query: 319 VVDDCQKAIGIVHF 332
           VV+D    +G+V F
Sbjct: 296 VVNDENHVVGLVEF 309


>gi|330909003|gb|EGH37517.1| capsular polysaccharide export system protein KpsF [Escherichia
           coli AA86]
          Length = 327

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 180/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA+++ R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIQQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMLHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|8571424|gb|AAF76879.1|AF247711_1 capsule expression protein [Sinorhizobium meliloti]
          Length = 359

 Score =  313 bits (802), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 140/313 (44%), Positives = 202/313 (64%), Gaps = 4/313 (1%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAIKG 65
            +  T   H+    + ++   R++     G+ +L   L    + +     AVE +    G
Sbjct: 4   VRHATADAHA--GGTVLESIGRTLTTATNGIKALADHLTSDQDFAGALVDAVELMGDGDG 61

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RVV++G+GKSGHIG K+A+TLASTGT ++FVH  EASHGDLGMIT  D +++LSWSG + 
Sbjct: 62  RVVVSGVGKSGHIGRKIAATLASTGTSAYFVHPTEASHGDLGMITAQDALVLLSWSGETA 121

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  +L YA+RF +P+++I S  +S +A +++I L LPK PE+CPHGLAPTTSA++QLA+
Sbjct: 122 ELANMLTYAKRFKVPIVSICSNRESTLARNSEIALVLPKVPEACPHGLAPTTSAMLQLAV 181

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDALAIALLE R FS  DF   HPGGKLG       ++ H    +PL+ +G P+ +A+  
Sbjct: 182 GDALAIALLERRGFSAEDFKTFHPGGKLGAQLRLVQELAHGTGQMPLLSVGRPMSEAVIE 241

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           +S K FG V + DE  KL G+IT+GD+ R+   DL    V++VM +NP+VI  D L + A
Sbjct: 242 MSAKGFGVVGITDESGKLIGVITDGDLRRHMAGDLLAQPVQEVMSRNPRVIKGDVLASAA 301

Query: 306 MQLLRQHNISVLM 318
           M+ ++ H +   +
Sbjct: 302 MEFMQDHKVHRAV 314


>gi|157158310|ref|YP_001464016.1| D-arabinose 5-phosphate isomerase [Escherichia coli E24377A]
 gi|191167097|ref|ZP_03028918.1| gutQ protein [Escherichia coli B7A]
 gi|193065010|ref|ZP_03046085.1| gutQ protein [Escherichia coli E22]
 gi|194427887|ref|ZP_03060433.1| gutQ protein [Escherichia coli B171]
 gi|260845350|ref|YP_003223128.1| putative phosphosugar-binding protein [Escherichia coli O103:H2
           str. 12009]
 gi|300924244|ref|ZP_07140230.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           182-1]
 gi|301326267|ref|ZP_07219643.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|309795167|ref|ZP_07689586.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           145-7]
 gi|157080340|gb|ABV20048.1| gutQ protein [Escherichia coli E24377A]
 gi|190902879|gb|EDV62607.1| gutQ protein [Escherichia coli B7A]
 gi|192927307|gb|EDV81926.1| gutQ protein [Escherichia coli E22]
 gi|194414120|gb|EDX30396.1| gutQ protein [Escherichia coli B171]
 gi|257760497|dbj|BAI31994.1| predicted phosphosugar-binding protein [Escherichia coli O103:H2
           str. 12009]
 gi|300419543|gb|EFK02854.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           182-1]
 gi|300847007|gb|EFK74767.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 78-1]
 gi|308121138|gb|EFO58400.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           145-7]
 gi|323159791|gb|EFZ45763.1| arabinose 5-phosphate isomerase [Escherichia coli E128010]
 gi|324017060|gb|EGB86279.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           117-3]
          Length = 321

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|301060757|ref|ZP_07201572.1| putative arabinose 5-phosphate isomerase [delta proteobacterium
           NaphS2]
 gi|300445154|gb|EFK09104.1| putative arabinose 5-phosphate isomerase [delta proteobacterium
           NaphS2]
          Length = 324

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 133/317 (41%), Positives = 191/317 (60%), Gaps = 7/317 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   +  E + +  L   +       F  AV  I   +GRV++TG+GKSG +  K+
Sbjct: 2   LIEQAKEVLQIEAQSILGLMDQI----GPAFAEAVSLILKARGRVILTGMGKSGLVARKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TL STGT SFF+H AEA HGDLGM T DD+++ +S SG + E+  IL   R+  + +I
Sbjct: 58  SATLNSTGTKSFFLHPAEAIHGDLGMATPDDILLAISNSGHTAEINKILPILRQMKVTII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           + T    S +A H+D+V+ +  E E+CP GLAPT S    LA+GDALA+ LL+SR+FS+ 
Sbjct: 118 SFTGGLDSPMAQHSDLVIDVGVEREACPLGLAPTASTTAALAMGDALAVVLLKSRHFSKK 177

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L     DVM + D IP+V +G  + DA+T ++EK+ G   VVD  +
Sbjct: 178 DFRRFHPGGSLGERLSFKVRDVMSTDDHIPMVCLGSNIRDALTEINEKKMGATLVVDGDR 237

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           KL GII++GD+ R   +  D+  + VED+M   PK I ED     A+ L+    I+ L++
Sbjct: 238 KLAGIISDGDLRRALSRGDDIYRMKVEDIMSATPKTIDEDATSAEAIALMELSAITHLII 297

Query: 320 VDDCQKAIGIVHFLDLL 336
            D  QK  G+VH  DLL
Sbjct: 298 ADTHQKVKGMVHLHDLL 314


>gi|324111332|gb|EGC05314.1| KpsF/GutQ family protein sugar isomerase [Escherichia fergusonii
           B253]
          Length = 321

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVTLTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|218555250|ref|YP_002388163.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI1]
 gi|218362018|emb|CAQ99625.1| putative phosphosugar-binding protein [Escherichia coli IAI1]
 gi|324119957|gb|EGC13835.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1167]
          Length = 321

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQTRG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|284922967|emb|CBG36059.1| polysialic acid capsule expression protein [Escherichia coli 042]
          Length = 327

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMLHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|194432964|ref|ZP_03065247.1| gutQ protein [Shigella dysenteriae 1012]
 gi|194418691|gb|EDX34777.1| gutQ protein [Shigella dysenteriae 1012]
 gi|332088726|gb|EGI93839.1| arabinose 5-phosphate isomerase [Shigella dysenteriae 155-74]
          Length = 321

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 180/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH  EA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPVEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|110806667|ref|YP_690187.1| D-arabinose 5-phosphate isomerase [Shigella flexneri 5 str. 8401]
 gi|110616215|gb|ABF04882.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|333001046|gb|EGK20616.1| arabinose 5-phosphate isomerase [Shigella flexneri K-272]
 gi|333015451|gb|EGK34790.1| arabinose 5-phosphate isomerase [Shigella flexneri K-227]
          Length = 321

 Score =  312 bits (801), Expect = 3e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|326796608|ref|YP_004314428.1| KpsF/GutQ family protein [Marinomonas mediterranea MMB-1]
 gi|326547372|gb|ADZ92592.1| KpsF/GutQ family protein [Marinomonas mediterranea MMB-1]
          Length = 325

 Score =  312 bits (801), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 127/329 (38%), Positives = 192/329 (58%), Gaps = 10/329 (3%)

Query: 11  VTRKGHSL--MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +    H+L    ++ +Q A  ++  +   L+ L   L  E    F  AV+ I A  GRV+
Sbjct: 1   MNHSSHALRLSDDAILQSARTTLDTQANALTGLSQRLSNE----FSQAVKMILATSGRVI 56

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+GKSG IG K+A+TLASTGTPSFF+H  EA HGDLGMI ++DL++++S+SG ++E+ 
Sbjct: 57  VCGMGKSGLIGKKIAATLASTGTPSFFLHPGEAFHGDLGMIQKEDLVLLISYSGETEEVI 116

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L     F  PLIAI     S +A H+   L +  + E+CP+ LAPTTS  +  AIGDA
Sbjct: 117 RLLPSLSNFGNPLIAIAGNPSSTLATHSQCFLNIAVDREACPNNLAPTTSTTLTAAIGDA 176

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LA+AL+E R+F   DF   HPGG LG   +     +   D++P      PL DAI++++ 
Sbjct: 177 LAVALMECRDFQPQDFARFHPGGSLGRKLLTRVKDLMHKDNLPTCAPSMPLSDAISVMTT 236

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
            R G V + DE  ++ GI T+GD+ R       D+ + S+ ++M  NPK I E  ++  A
Sbjct: 237 GRMGVVLIEDEK-RIVGIFTDGDLRRALLTKGGDIMSKSMAELMTANPKTIHESVMIVEA 295

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +    I++L+VVDD    +G++   D
Sbjct: 296 EERMINEKITLLVVVDDSDSVVGLLEIYD 324


>gi|237752755|ref|ZP_04583235.1| KpsF/GutQ family protein [Helicobacter winghamensis ATCC BAA-430]
 gi|229376244|gb|EEO26335.1| KpsF/GutQ family protein [Helicobacter winghamensis ATCC BAA-430]
          Length = 313

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 116/316 (36%), Positives = 182/316 (57%), Gaps = 6/316 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A      E   +  L+     ++   F+  +  I  IKGR++I+G+GKSGHIG+K
Sbjct: 3   DFIKIAKEVFDLEANAILDLK----TKMDSNFNAVIACILGIKGRLIISGMGKSGHIGAK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGTPSFF+H AEA HGDLGM+  +D ++ +S SG S+E+  ++   R   IPL
Sbjct: 59  IAATLASTGTPSFFMHPAEALHGDLGMLREEDALLAISNSGESEEILRLIPSIRIRKIPL 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA++ ++ S +A  +D  L +  + E+CP  LAPT+S    LA+GDA+A+AL+ +RNF  
Sbjct: 119 IALSGKSDSTLARESDYFLNVGVKKEACPLQLAPTSSTTATLAMGDAIAVALMRARNFKP 178

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF + HPGG LG   +     +    ++P+V         I  ++ K+ G   V  E  
Sbjct: 179 EDFALFHPGGSLGRKLLTRVKDIMVSKNLPIVAPDSSFKTLIAEMTSKKLGVCLVC-EDT 237

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KL GIIT+GD+ R  + D    +  ++M ++PK I  + + T A  L+ +H I  L+V+D
Sbjct: 238 KLLGIITDGDLRRALNADKFNANAREIMTEHPKTINLNAMATEAESLMLEHKIKELVVMD 297

Query: 322 DCQKAIGIVHFLDLLR 337
                +G+V    + R
Sbjct: 298 HTD-CVGVVQLYTIAR 312


>gi|238788149|ref|ZP_04631944.1| hypothetical protein yfred0001_35970 [Yersinia frederiksenii ATCC
           33641]
 gi|238723736|gb|EEQ15381.1| hypothetical protein yfred0001_35970 [Yersinia frederiksenii ATCC
           33641]
          Length = 299

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 125/295 (42%), Positives = 172/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLAENQIPVIAITGGKESPLALGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPKQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 287 DVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L +      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 244 TGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVNLEGKLVGAINLHDLHQAGV 298


>gi|319954188|ref|YP_004165455.1| kpsf/gutq family protein [Cellulophaga algicola DSM 14237]
 gi|319422848|gb|ADV49957.1| KpsF/GutQ family protein [Cellulophaga algicola DSM 14237]
          Length = 321

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 127/327 (38%), Positives = 184/327 (56%), Gaps = 10/327 (3%)

Query: 19  MKNS--TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+   +  A R+I  E   + +L S L       F   +  I    GR++I+GIGKS 
Sbjct: 1   MKNNTAILDIARRTIENEANAIQNLSSLL----DANFANTINHILNSTGRIIISGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I SK+ +TL STGTP+ F+HAA+A HGDLG +  +D +I +S SG++ E+K ++   ++
Sbjct: 57  LIASKIVATLNSTGTPAIFMHAADAIHGDLGTVQENDTVICISKSGNTPEIKMLVPLIKK 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               LIA+T    SV+A  ++ +L    E E+CP+ LAPTTS   QL +GDALA+ LLE 
Sbjct: 117 TGNTLIAMTGNLDSVLAKQSNYILNTFVEKEACPNNLAPTTSTTAQLVMGDALAVCLLEL 176

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R FS  DF   HPGG LG         +   +  P V +   +   I  +S K  G  AV
Sbjct: 177 RGFSSKDFAKFHPGGSLGKRLYLRVSDIVENNMKPQVTVNSDVKQVIVEISAKMLGVTAV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           + E  K+ GI+T+GDI R  +K  D+  L+  D+M  NPK I  D L   A++L++  NI
Sbjct: 237 L-ENNKIVGIVTDGDIRRMLNKYDDIKGLTARDIMSANPKTIENDALAVKALELMQAKNI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           S L+ + +     GIVH  +L+  GI+
Sbjct: 296 SQLISI-ENGTYKGIVHIHNLINEGIL 321


>gi|238758853|ref|ZP_04620026.1| hypothetical protein yaldo0001_24340 [Yersinia aldovae ATCC 35236]
 gi|238702961|gb|EEP95505.1| hypothetical protein yaldo0001_24340 [Yersinia aldovae ATCC 35236]
          Length = 317

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 130/319 (40%), Positives = 179/319 (56%), Gaps = 6/319 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A  ++  E      L S L       F  A E + A  G+ V++GIGKSGHIG K+A
Sbjct: 2   ITYARETLEIELAEAHKLLSRLDN----NFIRACELLLACTGKAVVSGIGKSGHIGKKIA 57

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           ++LASTGTPSFFVH AEA HGDLGMI R D++I +S+S  + EL  IL       IP+IA
Sbjct: 58  ASLASTGTPSFFVHPAEALHGDLGMIGRQDVLIFISYSSRAKELDLILPLLADSHIPVIA 117

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A  A  VL +  E E+CP GLAPT+SA+  L +GDALA+AL+  R F+  D
Sbjct: 118 ITGGLESPLAQGAACVLDISVEHEACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAED 177

Query: 204 FYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F   HPGG LG  L      +M +GD +P+V     +++A+  LS    G VAV D  Q+
Sbjct: 178 FARSHPGGSLGAKLLNRVHHLMRTGDRLPVVNESDTVMEAMLELSRTGLGLVAVCDPNQR 237

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVD 321
           + G+ T+GD+ R   K           I  P   L +      A++ L QH+IS   VV+
Sbjct: 238 VVGVFTDGDLRRWLVKGGTLQQPLGGAITRPGYRLPEQWRAGEALEALHQHHISAAPVVN 297

Query: 322 DCQKAIGIVHFLDLLRFGI 340
              K +G ++  DL + G+
Sbjct: 298 LDGKLVGALNLHDLHQAGV 316


>gi|110642828|ref|YP_670558.1| D-arabinose 5-phosphate isomerase [Escherichia coli 536]
 gi|191171405|ref|ZP_03032954.1| gutQ protein [Escherichia coli F11]
 gi|300975095|ref|ZP_07172862.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           200-1]
 gi|110344420|gb|ABG70657.1| putative phosphosugar binding protein [Escherichia coli 536]
 gi|190908339|gb|EDV67929.1| gutQ protein [Escherichia coli F11]
 gi|300308776|gb|EFJ63296.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           200-1]
 gi|324013714|gb|EGB82933.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 60-1]
          Length = 321

 Score =  312 bits (800), Expect = 4e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|238783817|ref|ZP_04627835.1| hypothetical protein yberc0001_28900 [Yersinia bercovieri ATCC
           43970]
 gi|238715204|gb|EEQ07198.1| hypothetical protein yberc0001_28900 [Yersinia bercovieri ATCC
           43970]
          Length = 299

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 125/295 (42%), Positives = 173/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLG
Sbjct: 4   RLDDNFIRACELLLACSGKAVVSGIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGKESPLAQGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSV 285
           GD +P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K       +
Sbjct: 184 GDRLPVVNESDSVMEAMLELSRTGLGLVAVCDPHQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              + +    + E      A++ L QH+IS   VVD   K +G ++  DL + GI
Sbjct: 244 AGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLQGKLVGAINLHDLHQAGI 298


>gi|146329517|ref|YP_001209446.1| arabinose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
 gi|146232987|gb|ABQ13965.1| arabinose 5-phosphate isomerase [Dichelobacter nodosus VCS1703A]
          Length = 320

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 125/297 (42%), Positives = 183/297 (61%), Gaps = 4/297 (1%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L+  F  A E +   +G V+++G+GKSGHI +KLA+T ASTGTP+FFVH +EA HGDL
Sbjct: 24  QRLTDDFGRACETLMKTRGHVIVSGMGKSGHIAAKLAATFASTGTPAFFVHPSEAGHGDL 83

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           GMIT  D +++LS+SG S EL A+L   +  ++P+IA+T   +S +A +ADI + +  E 
Sbjct: 84  GMITAADTLLMLSFSGESGELLAMLPALKTLAVPVIAMTGNPQSHLAQNADIHIPIHIER 143

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMH 225
           E+CP  LAPT S    LA+GDALAI+L+++R+F++ DF   HP G+LG    +  +D+M 
Sbjct: 144 EACPLNLAPTASTTAMLAVGDALAISLMQARDFNDEDFARSHPFGRLGRRLTIKVADIMR 203

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
               +PL      +  A+  +++KR G   +  E  KL GI T+GD+ R      +   L
Sbjct: 204 PFAQLPLNLPTDSVQTALFQITDKRLGMTLIAQEK-KLLGIYTDGDLRRTLGAFSNALHL 262

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +E VM KNPK I E  L   A+ L++Q  I+VL V+   Q+  G VH  DL+  G+
Sbjct: 263 PLEHVMTKNPKTITEHCLAAEALHLMQQQQITVLPVLTIEQQLCGAVHIHDLIAAGV 319


>gi|324005456|gb|EGB74675.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 57-2]
          Length = 327

 Score =  312 bits (800), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 180/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S++A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSMLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|38704115|ref|NP_311591.2| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           Sakai]
 gi|89109495|ref|AP_003275.1| predicted phosphosugar-binding protein [Escherichia coli str. K-12
           substr. W3110]
 gi|90111480|ref|NP_417188.4| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|168749968|ref|ZP_02774990.1| gutQ protein [Escherichia coli O157:H7 str. EC4113]
 gi|168755452|ref|ZP_02780459.1| gutQ protein [Escherichia coli O157:H7 str. EC4401]
 gi|168762894|ref|ZP_02787901.1| gutQ protein [Escherichia coli O157:H7 str. EC4501]
 gi|168768798|ref|ZP_02793805.1| gutQ protein [Escherichia coli O157:H7 str. EC4486]
 gi|168774761|ref|ZP_02799768.1| gutQ protein [Escherichia coli O157:H7 str. EC4196]
 gi|168778689|ref|ZP_02803696.1| gutQ protein [Escherichia coli O157:H7 str. EC4076]
 gi|168787962|ref|ZP_02812969.1| gutQ protein [Escherichia coli O157:H7 str. EC869]
 gi|168800212|ref|ZP_02825219.1| gutQ protein [Escherichia coli O157:H7 str. EC508]
 gi|170082284|ref|YP_001731604.1| phosphosugar-binding protein [Escherichia coli str. K-12 substr.
           DH10B]
 gi|170680279|ref|YP_001744855.1| D-arabinose 5-phosphate isomerase [Escherichia coli SMS-3-5]
 gi|194438978|ref|ZP_03071062.1| gutQ protein [Escherichia coli 101-1]
 gi|195938457|ref|ZP_03083839.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EC4024]
 gi|208807068|ref|ZP_03249405.1| gutQ protein [Escherichia coli O157:H7 str. EC4206]
 gi|208814267|ref|ZP_03255596.1| gutQ protein [Escherichia coli O157:H7 str. EC4045]
 gi|208819202|ref|ZP_03259522.1| gutQ protein [Escherichia coli O157:H7 str. EC4042]
 gi|209396393|ref|YP_002272170.1| gutQ protein [Escherichia coli O157:H7 str. EC4115]
 gi|217326989|ref|ZP_03443072.1| gutQ protein [Escherichia coli O157:H7 str. TW14588]
 gi|218701198|ref|YP_002408827.1| D-arabinose 5-phosphate isomerase [Escherichia coli IAI39]
 gi|238901845|ref|YP_002927641.1| putative phosphosugar-binding protein [Escherichia coli BW2952]
 gi|253772437|ref|YP_003035268.1| D-arabinose 5-phosphate isomerase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254037747|ref|ZP_04871805.1| gutQ protein [Escherichia sp. 1_1_43]
 gi|254162639|ref|YP_003045747.1| D-arabinose 5-phosphate isomerase [Escherichia coli B str. REL606]
 gi|254794648|ref|YP_003079485.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           TW14359]
 gi|256024785|ref|ZP_05438650.1| D-arabinose 5-phosphate isomerase [Escherichia sp. 4_1_40B]
 gi|261226002|ref|ZP_05940283.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. FRIK2000]
 gi|261256740|ref|ZP_05949273.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. FRIK966]
 gi|291284035|ref|YP_003500853.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|293449021|ref|ZP_06663442.1| gutQ [Escherichia coli B088]
 gi|300815889|ref|ZP_07096113.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           107-1]
 gi|300930562|ref|ZP_07145956.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           187-1]
 gi|300941078|ref|ZP_07155593.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300947019|ref|ZP_07161242.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           116-1]
 gi|300954943|ref|ZP_07167358.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           175-1]
 gi|301026628|ref|ZP_07190048.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           196-1]
 gi|301645316|ref|ZP_07245264.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           146-1]
 gi|307139395|ref|ZP_07498751.1| D-arabinose 5-phosphate isomerase [Escherichia coli H736]
 gi|331643391|ref|ZP_08344522.1| protein GutQ [Escherichia coli H736]
 gi|14917002|sp|P17115|GUTQ_ECOLI RecName: Full=Protein gutQ
 gi|85675529|dbj|BAE76785.1| predicted phosphosugar-binding protein [Escherichia coli str. K12
           substr. W3110]
 gi|87082151|gb|AAC75750.2| D-arabinose 5-phosphate isomerase [Escherichia coli str. K-12
           substr. MG1655]
 gi|169890119|gb|ACB03826.1| predicted phosphosugar-binding protein [Escherichia coli str. K-12
           substr. DH10B]
 gi|170517997|gb|ACB16175.1| gutQ protein [Escherichia coli SMS-3-5]
 gi|187769637|gb|EDU33481.1| gutQ protein [Escherichia coli O157:H7 str. EC4196]
 gi|188015808|gb|EDU53930.1| gutQ protein [Escherichia coli O157:H7 str. EC4113]
 gi|189003593|gb|EDU72579.1| gutQ protein [Escherichia coli O157:H7 str. EC4076]
 gi|189357261|gb|EDU75680.1| gutQ protein [Escherichia coli O157:H7 str. EC4401]
 gi|189362131|gb|EDU80550.1| gutQ protein [Escherichia coli O157:H7 str. EC4486]
 gi|189366887|gb|EDU85303.1| gutQ protein [Escherichia coli O157:H7 str. EC4501]
 gi|189372156|gb|EDU90572.1| gutQ protein [Escherichia coli O157:H7 str. EC869]
 gi|189377455|gb|EDU95871.1| gutQ protein [Escherichia coli O157:H7 str. EC508]
 gi|194422099|gb|EDX38102.1| gutQ protein [Escherichia coli 101-1]
 gi|208726869|gb|EDZ76470.1| gutQ protein [Escherichia coli O157:H7 str. EC4206]
 gi|208735544|gb|EDZ84231.1| gutQ protein [Escherichia coli O157:H7 str. EC4045]
 gi|208739325|gb|EDZ87007.1| gutQ protein [Escherichia coli O157:H7 str. EC4042]
 gi|209157793|gb|ACI35226.1| gutQ protein [Escherichia coli O157:H7 str. EC4115]
 gi|217319356|gb|EEC27781.1| gutQ protein [Escherichia coli O157:H7 str. TW14588]
 gi|218371184|emb|CAR19015.1| putative phosphosugar-binding protein [Escherichia coli IAI39]
 gi|226839371|gb|EEH71392.1| gutQ protein [Escherichia sp. 1_1_43]
 gi|238862829|gb|ACR64827.1| predicted phosphosugar-binding protein [Escherichia coli BW2952]
 gi|242378265|emb|CAQ33040.1| D-arabinose 5-phosphate isomerase [Escherichia coli BL21(DE3)]
 gi|253323481|gb|ACT28083.1| KpsF/GutQ family protein [Escherichia coli 'BL21-Gold(DE3)pLysS
           AG']
 gi|253974540|gb|ACT40211.1| predicted phosphosugar-binding protein [Escherichia coli B str.
           REL606]
 gi|253978707|gb|ACT44377.1| predicted phosphosugar-binding protein [Escherichia coli BL21(DE3)]
 gi|254594048|gb|ACT73409.1| predicted phosphosugar-binding protein [Escherichia coli O157:H7
           str. TW14359]
 gi|260448242|gb|ACX38664.1| KpsF/GutQ family protein [Escherichia coli DH1]
 gi|290763908|gb|ADD57869.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           CB9615]
 gi|291322111|gb|EFE61540.1| gutQ [Escherichia coli B088]
 gi|299879643|gb|EFI87854.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           196-1]
 gi|300318116|gb|EFJ67900.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           175-1]
 gi|300453333|gb|EFK16953.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           116-1]
 gi|300454187|gb|EFK17680.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 21-1]
 gi|300461566|gb|EFK25059.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           187-1]
 gi|300531818|gb|EFK52880.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           107-1]
 gi|301076386|gb|EFK91192.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           146-1]
 gi|309703067|emb|CBJ02399.1| D-arabinose 5-phosphate isomerase [Escherichia coli ETEC H10407]
 gi|315137315|dbj|BAJ44474.1| D-arabinose 5-phosphate isomerase [Escherichia coli DH1]
 gi|315615093|gb|EFU95730.1| arabinose 5-phosphate isomerase [Escherichia coli 3431]
 gi|320189040|gb|EFW63699.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. EC1212]
 gi|320640351|gb|EFX09890.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           G5101]
 gi|320645898|gb|EFX14879.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str.
           493-89]
 gi|320651198|gb|EFX19633.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H- str. H
           2687]
 gi|320656748|gb|EFX24636.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662291|gb|EFX29688.1| D-arabinose 5-phosphate isomerase [Escherichia coli O55:H7 str.
           USDA 5905]
 gi|320667342|gb|EFX34300.1| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           LSU-61]
 gi|323941462|gb|EGB37645.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E482]
 gi|323946414|gb|EGB42442.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H120]
 gi|323960633|gb|EGB56259.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H489]
 gi|323971503|gb|EGB66737.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TA007]
 gi|326339221|gb|EGD63036.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. 1044]
 gi|326342896|gb|EGD66664.1| Glucitol operon GutQ protein [Escherichia coli O157:H7 str. 1125]
 gi|331036862|gb|EGI09086.1| protein GutQ [Escherichia coli H736]
 gi|332344588|gb|AEE57922.1| arabinose 5-phosphate isomerase [Escherichia coli UMNK88]
          Length = 321

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|258622784|ref|ZP_05717802.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM573]
 gi|258584972|gb|EEW09703.1| Arabinose 5-phosphate isomerase [Vibrio mimicus VM573]
          Length = 274

 Score =  312 bits (799), Expect = 5e-83,   Method: Composition-based stats.
 Identities = 122/275 (44%), Positives = 177/275 (64%), Gaps = 4/275 (1%)

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSGHIG K+A+TLASTGT +FFVH  EASHGDLGMI R D+++ +S SG S E+ A
Sbjct: 1   MGMGKSGHIGKKIAATLASTGTSAFFVHPGEASHGDLGMIERGDIVLAISNSGESSEILA 60

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +L   +R +I +I++T    S +A  ADI L +    E+CP  LAPT+S    L +GDAL
Sbjct: 61  LLPVLKRLNIRVISMTGNPSSNMAKLADIHLQITVPREACPLELAPTSSTTATLVMGDAL 120

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           A+AL+++R F+  DF + HPGG LG    +  +D+MHSG+++P V     + DA+  +S+
Sbjct: 121 AVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHSGEALPKVPPQALIRDALLEISQ 180

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           K  G  AVVDE   L GI T+GD+ R   K  D++T ++ DVM + P V   + L    +
Sbjct: 181 KGLGMTAVVDEQDTLLGIFTDGDLRRILDKRIDIHTTAIADVMTRQPTVAHPNLLAVEGL 240

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L++   I+ LM+VDD  K +G ++  DLL+ G++
Sbjct: 241 NLMQAKRINGLMLVDD-NKLVGALNMHDLLKAGVM 274


>gi|114797510|ref|YP_759746.1| KpsF/GutQ family sugar isomerase [Hyphomonas neptunium ATCC 15444]
 gi|114737684|gb|ABI75809.1| sugar isomerase, KpsF/GutQ family [Hyphomonas neptunium ATCC 15444]
          Length = 342

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 184/325 (56%), Gaps = 5/325 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   S +  A   I  E+  L  LE +L   L      AV  I A    V++ G+GKSGH
Sbjct: 22  LTSQSDLDLARNVIRTERNALEKLEQTLGPSL----EEAVSTILATDRHVIVAGVGKSGH 77

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A++LASTGTPSFF+H  EASHGDLGMI    ++I +S+SG S EL  +L Y +  
Sbjct: 78  IGQKIAASLASTGTPSFFLHPTEASHGDLGMIVPGSVVIAISYSGESRELIDLLRYCKSN 137

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +IPLIA+T   +S +  +AD++L LP  PE+CP+GLAPT+S  M LA+GDAL I L+  R
Sbjct: 138 AIPLIAMTRARESTLGRYADVLLELPTVPEACPNGLAPTSSTTMALALGDALTIVLMARR 197

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-PLVKIGCPLIDAITILSEKRFGCVAV 256
            FS  DF   HPGGKLG     A D +       PL   G    + +  +SE R GCV +
Sbjct: 198 GFSTEDFGFRHPGGKLGRTLQTAGDYIRDHKDPLPLASAGASFEELVIAVSEGRKGCVGI 257

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +DE +KL G++T+GD+ R         S  +VM   P+ I  D  +   ++   ++ IS 
Sbjct: 258 IDETRKLIGMVTDGDLRRAILAGRTNASAREVMTPGPRTIDPDARMMSVIKSFSENRISN 317

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+     G++   DLL  G +
Sbjct: 318 AFVVDETGAPAGLIDMKDLLAEGYV 342


>gi|161367540|ref|NP_289257.2| D-arabinose 5-phosphate isomerase [Escherichia coli O157:H7 str.
           EDL933]
          Length = 321

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMXELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|332999445|gb|EGK19030.1| arabinose 5-phosphate isomerase [Shigella flexneri VA-6]
          Length = 321

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSSTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|306812414|ref|ZP_07446612.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|222034401|emb|CAP77143.1| Protein gutQ [Escherichia coli LF82]
 gi|305854452|gb|EFM54890.1| D-arabinose 5-phosphate isomerase [Escherichia coli NC101]
 gi|312947236|gb|ADR28063.1| D-arabinose 5-phosphate isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|324005749|gb|EGB74968.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 57-2]
          Length = 321

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|51473687|ref|YP_067444.1| sugar isomerase [Rickettsia typhi str. Wilmington]
 gi|51459999|gb|AAU03962.1| sugar isomerase protein KpsF/GutQ family [Rickettsia typhi str.
           Wilmington]
          Length = 319

 Score =  312 bits (799), Expect = 6e-83,   Method: Composition-based stats.
 Identities = 122/315 (38%), Positives = 188/315 (59%), Gaps = 6/315 (1%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R I      L  L +++  +    F+  +E + + KGR+++TGIGKSG+I  K+A++
Sbjct: 10  IAKRIISNAANALDKLSNNIPAD----FNRIIEFLLSFKGRIILTGIGKSGYIARKIAAS 65

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            +STG PSF++H +EASHGDLG ITR+DL+++LS SG + EL  I+ Y    SI + A+T
Sbjct: 66  FSSTGMPSFYLHPSEASHGDLGTITRNDLVMMLSNSGETKELFNIIEYCNNSSIKIAAMT 125

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A  +D +L +P E +      APT S+++ L++GDA+   + E R F+ +DF 
Sbjct: 126 MNKNSTLAKRSDFLLIIP-ECQEASLIGAPTISSLIMLSLGDAVMTVIHEERGFTRDDFK 184

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           + HPGG +G       ++M SGD IPLV       + I I+++KR GC  V D+ Q L G
Sbjct: 185 IYHPGGTIGANLTKIKNIMRSGDEIPLVYEDTSFTETIIIMNKKRLGCTLVTDKEQNLIG 244

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           IIT+GD+ RN +  ++  +   +M KNP  I        A+ L++  NI+ + +VD+   
Sbjct: 245 IITDGDLRRNINDQIHLKTASSIMTKNPHHISSGIFAQEALNLMKAKNITNIPIVDN-NM 303

Query: 326 AIGIVHFLDLLRFGI 340
            IGI+H  DLLR G+
Sbjct: 304 IIGIIHIHDLLRMGV 318


>gi|226329332|ref|ZP_03804850.1| hypothetical protein PROPEN_03237 [Proteus penneri ATCC 35198]
 gi|225202518|gb|EEG84872.1| hypothetical protein PROPEN_03237 [Proteus penneri ATCC 35198]
          Length = 276

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 117/276 (42%), Positives = 169/276 (61%), Gaps = 4/276 (1%)

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSGHIG K+A+T ASTGTPSFFVH  EASHGDLGM+T  D+++ +S SG + E+ A
Sbjct: 1   MGMGKSGHIGHKIAATFASTGTPSFFVHPGEASHGDLGMVTEKDIVLAISNSGEASEILA 60

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++   +R  I LI +T   +S +   +DI L +    E+CP GLAPTTS    L +GDAL
Sbjct: 61  LIPVLKRKQITLICMTRTPQSTMGKASDIHLCIKVPKEACPLGLAPTTSTTATLVMGDAL 120

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           AIALL +R F+  DF + HPGG LG    +  SD+M+  + IP V     L +A+  ++ 
Sbjct: 121 AIALLRARGFTAEDFALSHPGGALGRKLLLHVSDLMNKEEDIPRVTKDATLREALVEITR 180

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           K+ G   + D+  ++ GI T+GD+ R F    DLN   + DVM K    I  D L   A+
Sbjct: 181 KKLGMTVICDDSMQINGIFTDGDLRRIFDLGIDLNNAKISDVMTKGGIRIRPDCLAVEAL 240

Query: 307 QLLRQHNISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
            L++  +I+ L+V + D    +G++H  DLL+ G++
Sbjct: 241 NLMQAKHITSLLVTEQDSDILLGVLHMHDLLQAGVV 276


>gi|323966853|gb|EGB62282.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli M863]
 gi|323978684|gb|EGB73766.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli TW10509]
 gi|327251427|gb|EGE63113.1| arabinose 5-phosphate isomerase [Escherichia coli STEC_7v]
          Length = 321

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +L  +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|319940823|ref|ZP_08015162.1| capsule expression protein KpsF/GutQ [Sutterella wadsworthensis
           3_1_45B]
 gi|319805705|gb|EFW02486.1| capsule expression protein KpsF/GutQ [Sutterella wadsworthensis
           3_1_45B]
          Length = 330

 Score =  312 bits (799), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 125/324 (38%), Positives = 190/324 (58%), Gaps = 5/324 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+ ++     +  E   + +    +       F  AV+ I   +GR+V++G+GKSGHIG 
Sbjct: 9   NAALKLGQDVLSHEADAILAASRRIGETPD--FAQAVKAILGCRGRLVVSGVGKSGHIGR 66

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           KLA+T ASTGTP+FFVHA EA+HGDLGMIT +D+++ +S+SG + EL  I+   +R    
Sbjct: 67  KLAATFASTGTPAFFVHAGEAAHGDLGMITSEDIVLGISYSGETQELLMIVPILKREGAI 126

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T   +S +A HAD+ +    + E+CP  LAPT+S    LA+GDALA+A L ++ FS
Sbjct: 127 LIAMTGNPESTLAQHADLHINCHVDREACPLNLAPTSSTTTTLALGDALAVACLSAKGFS 186

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + DF   HPGG LG    +   D+M +GD +P V     ++DA+  +++K  G  AVVD 
Sbjct: 187 QEDFARSHPGGALGRRLLLHVRDIMRTGDELPRVTADVRVLDAVREITKKHIGMTAVVDS 246

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI TEGD+ R   +  D+  + + DVM  +P  I  D L   A++ L     + L
Sbjct: 247 DNRVIGIFTEGDLRRLIERMGDVRDVIMRDVMTPSPHTISPDELAAAAVKALEAFQCNQL 306

Query: 318 MVVDDCQKAIGIVHFLDLLRFGII 341
           +VVD     +G +H  DL+   ++
Sbjct: 307 LVVDADNHLVGALHMHDLMNARVL 330


>gi|322514597|ref|ZP_08067630.1| arabinose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
 gi|322119536|gb|EFX91623.1| arabinose 5-phosphate isomerase [Actinobacillus ureae ATCC 25976]
          Length = 311

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 113/311 (36%), Positives = 184/311 (59%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + ++ L   L G     F+ A+E I   +GRVV+TGIGKSG +G K
Sbjct: 2   NYLASANETLSLYTQAINQLNQRLDGT----FNQAIEMILNCEGRVVVTGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D++I++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNTI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A +A++ L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R F  
Sbjct: 118 IAMTGNPHSTLAQYANLTLNIGVEREACPNNLAPTTSTLVTMALGDALAIALINARGFKT 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +     +P+ +        +++++E R G   ++ + +
Sbjct: 178 EDFARFHPGGSLGRKLLNRVKDVMQTK-LPIAQPNADFSTILSVMNEGRMGVALIM-QNE 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L+GIIT+GDI R   +      T + E +M KNPK I ++T L  A +++++ +I  L+
Sbjct: 236 DLQGIITDGDIRRTLAQFGAGSLTKTAEQIMSKNPKTISDNTYLAKAEEMMKELHIHSLI 295

Query: 319 VVDDCQKAIGI 329
            ++D  K  GI
Sbjct: 296 ALNDEGKVSGI 306


>gi|94270807|ref|ZP_01291829.1| KpsF/GutQ [delta proteobacterium MLMS-1]
 gi|93450655|gb|EAT01755.1| KpsF/GutQ [delta proteobacterium MLMS-1]
          Length = 328

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 120/325 (36%), Positives = 184/325 (56%), Gaps = 10/325 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +++ + A   +  E  G+ ++   +       F  AVE I A   R++++GIGKSG IG 
Sbjct: 2   STSREQAREVLRLEAEGIEAVRERI----DDAFERAVELIMACPTRLIVSGIGKSGIIGQ 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ STGTP+ F+H  EA HGDLG++   D+++ +S+SG + EL  +L   +     
Sbjct: 58  KIAATMNSTGTPALFLHPVEAMHGDLGIVDPRDVVLAISYSGETAELNLLLPTLKSRGAR 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T    S +A  AD VL +    E+CP GLAPT S    LA+GDALA+ LL  +NF+
Sbjct: 118 IIAMTGRPDSGLAAAADAVLNVAVPCEACPLGLAPTASTTATLALGDALAVVLLRRKNFA 177

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L +  S+VM +G  IP V     L +A+  L+ K  G V V+  
Sbjct: 178 AGDFRRNHPGGSLGERLKIRVSEVMLTGAEIPTVAEDASLPEAVAELNRKNLGAVLVMAA 237

Query: 260 GQK-LKGIITEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             + + GI+T+GD+ R        D   LS+  VM ++PK I  + L   A+ ++++H +
Sbjct: 238 DGETMVGILTDGDLRRMVADGRQADFAELSLTAVMGRDPKCITPELLAADALSIMQRHEV 297

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VL V D  ++  GI+H  D+   G
Sbjct: 298 TVLPVTDARRRLFGILHLQDMFGKG 322


>gi|86160480|ref|YP_467265.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776991|gb|ABC83828.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 348

 Score =  311 bits (798), Expect = 7e-83,   Method: Composition-based stats.
 Identities = 121/326 (37%), Positives = 182/326 (55%), Gaps = 10/326 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               V      + AE R + ++       L   F  AV  I   KGRVV+TG+GK G + 
Sbjct: 29  TQDLVTYGRTVVEAEARAIGAV------PLDDAFATAVRWILGCKGRVVVTGMGKPGFVA 82

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+++TLASTGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++   
Sbjct: 83  QKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGA 142

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++AIT++  + +A  AD+V+ +    E+CP GLAPT S  + LA+GDAL++ +L +R F
Sbjct: 143 KIVAITADRSNRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDALSMTVLANRPF 202

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVV 257
              ++ + HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV
Sbjct: 203 DREEYALFHPGGKLGRGLMKVHELMRGETSNPVVREDAPLAAAVAVMTETPGRPGATSVV 262

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                L GI T+GD+ R   +        V   M K PK +  D L+  A ++LRQ  I 
Sbjct: 263 AADGTLVGIFTDGDLRRLVERGDTDFSRPVSSAMCKGPKTVRPDALVVDAARVLRQARID 322

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VVD   + +G++   DLL   I+
Sbjct: 323 QVPVVDADGRPVGLLDVQDLLAAKIL 348


>gi|323951537|gb|EGB47412.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
          Length = 327

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 120/314 (38%), Positives = 179/314 (57%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKIFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|86279119|gb|ABC88654.1| KpsF [Escherichia coli BL21(DE3)]
          Length = 327

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 178/314 (56%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H  EA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPTEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIHQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVSA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTVIIEAEEKMQKHRVSTLLVT 313

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 314 NKANKVTGLVRIFD 327


>gi|84683742|ref|ZP_01011645.1| hypothetical protein 1099457000264_RB2654_20253 [Maritimibacter
           alkaliphilus HTCC2654]
 gi|84668485|gb|EAQ14952.1| hypothetical protein RB2654_20253 [Rhodobacterales bacterium
           HTCC2654]
          Length = 320

 Score =  311 bits (798), Expect = 8e-83,   Method: Composition-based stats.
 Identities = 139/322 (43%), Positives = 196/322 (60%), Gaps = 6/322 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +  A   +++E   L++L  SL  +    F  A + I    G+VV+ G+GKSGHI
Sbjct: 4   MPTTVIDTARDVLLSEAAALTTLADSLPAD----FEAAAQLILDRNGKVVVGGVGKSGHI 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STG+P+FF+H  EA+HGDLGMI   D  +++S SG + EL  ++ + +RF 
Sbjct: 60  GRKIAATLSSTGSPAFFIHPTEAAHGDLGMIEEHDTALLISNSGETSELLVMIEFCQRFD 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I I+S   S +   +   L LPK PE+CP  LAP TS  M LA+GDALA +L++ R 
Sbjct: 120 IPIIGISSVPGSTLMLASQCQLLLPKVPEACPIRLAPMTSTTMTLALGDALAASLMQKRG 179

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FS  DF V HPGGKLG   +    VMH GD +P++    P+ +A+  +SEK FG   ++ 
Sbjct: 180 FSPTDFGVFHPGGKLGVQLMRVGQVMHDGDRLPILTPDTPMKEAVLTISEKGFGTAGIM- 238

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           EG KL GIIT+GD+ RN    L   +  D+M K P     D  ++ A+  + +H +S L 
Sbjct: 239 EGDKLTGIITDGDVRRNID-GLFDKTARDIMTKTPITTKTDVPVSQALSKIEEHAVSALF 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VVD   K IGIVH  DLLR G+
Sbjct: 298 VVDADGKPIGIVHLHDLLRLGV 319


>gi|154174038|ref|YP_001407360.1| arabinose 5-phosphate isomerase [Campylobacter curvus 525.92]
 gi|112802435|gb|EAT99779.1| arabinose 5-phosphate isomerase [Campylobacter curvus 525.92]
          Length = 320

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 115/324 (35%), Positives = 190/324 (58%), Gaps = 9/324 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            +    A   +  E + L    S+L GE+      AV  +   KG+V++TG+GKSGHIG+
Sbjct: 2   QNMQDIAAEVLKIEAQELLRHASNLGGEI----EEAVNLMYNTKGKVIVTGVGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMI ++D+++ +S+SG SDEL  IL + +RF + 
Sbjct: 58  KIAATLASTGTPSFFIHPTEAMHGDLGMIDKNDVVLAISFSGESDELVKILPHVKRFGVK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I++     S +   +D  + L    E+CP  +APT S  + LA+GDALA+ L++ R F 
Sbjct: 118 IISMARSKASSLGKFSDAFICLDIVREACPLNVAPTASTTLTLALGDALAVCLMKRRGFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         +   +++P+V     L +AI  ++  + G V +V+  
Sbjct: 178 KEDFANFHPGGSLGKRLFLKVKDVMRSENLPIVSDDVSLKNAIDTMTHGKLGNVLLVNLK 237

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISV 316
            +L  ++++GD+ R       D+N  +++    K+PK +   + L   A++L+ ++ I +
Sbjct: 238 GELVAVLSDGDLRRALMSEKFDINEKAIK-YATKSPKTLSDPEMLAIDALKLIEEYKIQI 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L+VVD+  + IG++H  +L   G+
Sbjct: 297 LIVVDNAHRPIGVLHIHNLANLGL 320


>gi|76809505|ref|YP_334633.1| arabinose-5-phosphate isomerase [Burkholderia pseudomallei 1710b]
 gi|76578958|gb|ABA48433.1| arabinose-5-phosphate isomerase [Burkholderia pseudomallei 1710b]
          Length = 351

 Score =  311 bits (798), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 114/323 (35%), Positives = 174/323 (53%), Gaps = 10/323 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL + +    S  F  AV+ I    GRVV+
Sbjct: 33  SMAHDGSQMNHHNYLDSARQVFDIESRALASLSARV----SDSFGDAVDAILRSSGRVVV 88

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 89  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 148

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 149 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 208

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 209 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 268

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 269 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 326

Query: 307 QLLRQHNISVLMVVDDCQKAIGI 329
            ++    I+ L+V D     +G+
Sbjct: 327 LMMEARRINALLVFDGED-VVGV 348


>gi|229541725|ref|ZP_04430785.1| KpsF/GutQ family protein [Bacillus coagulans 36D1]
 gi|229326145|gb|EEN91820.1| KpsF/GutQ family protein [Bacillus coagulans 36D1]
          Length = 325

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 113/319 (35%), Positives = 186/319 (58%), Gaps = 8/319 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + V+     +  E   +  L+  +   ++      +E I A +GRV+ TG+GKSG IG K
Sbjct: 10  NYVESVREVLEKEANEILKLKDRINFRINEG----IEMILACEGRVIFTGMGKSGIIGRK 65

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LAST ASTGTP+FF+H  EA HGDLG IT++D++I +S SG + E+  ++   +R    +
Sbjct: 66  LASTFASTGTPAFFLHPGEALHGDLGKITKEDILIAISNSGETSEILNMIPSIKRIGAKM 125

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAI+   KS +A  +++V+ + +  E+CP GLAPT++  + LA+GDA+A+ALL++R+F  
Sbjct: 126 IAISGSRKSTLARRSNLVMDIGEVEEACPLGLAPTSTTTVTLALGDAIAVALLKARDFKP 185

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F + HPGG LG    +    V       P+  +   + +A+ +++E   G V+V+D+ 
Sbjct: 186 ENFALFHPGGSLGRRLLLTVGHVAKRKSMNPVAGMDTGIKEALFMMTEAGAGAVSVIDDR 245

Query: 261 QKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +L GI+T+GDI R      ++    V D+  K P  + E  L   A++++  H   VL 
Sbjct: 246 GRLAGILTDGDIRRELLNGHEVLDKKVADLYTKYPVCVSEHQLAAEALRIMEDHAFKVLP 305

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV   QK + ++H  DL++
Sbjct: 306 VVT-GQKPVAMLHIQDLVQ 323


>gi|242281058|ref|YP_002993187.1| KpsF/GutQ family protein [Desulfovibrio salexigens DSM 2638]
 gi|242123952|gb|ACS81648.1| KpsF/GutQ family protein [Desulfovibrio salexigens DSM 2638]
          Length = 332

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 128/321 (39%), Positives = 186/321 (57%), Gaps = 7/321 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++     +  E+ GL+S+  SL       F  AVE +   KGRV+ITG+GKSG +G 
Sbjct: 7   SDFIKRGKEVLQIEENGLASIRESL----DLNFAKAVEMLAGCKGRVIITGLGKSGLVGR 62

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T++STGTPSFF+H  E +HGDLGM+  +D++I +S SG +DEL A+L   R F   
Sbjct: 63  KIAATMSSTGTPSFFLHPVEGAHGDLGMVRTEDVVISISNSGETDELNALLPAIRSFGTQ 122

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I+ITSE +S +   +DIV+      E+C HGLAPT+S    LAIGDALA+ L++ + F 
Sbjct: 123 IISITSEIESTMGRLSDIVIKTKVPCEACSHGLAPTSSTTAALAIGDALAVCLMDHKAFD 182

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG LG         +   D+IP       L +A+T+L +   G VA+ D G
Sbjct: 183 SQDFKKFHPGGSLGRRLTLCISELMHTDNIPAAAQDGTLAEALTVLDKGGLGLVALTD-G 241

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +KL G+IT+GD+ R          +   +VMI+NP  I  D     A+ ++    I+VL 
Sbjct: 242 EKLSGVITDGDVRRLVCSGNFNTQISAREVMIENPLRITPDMSAAQALDIMESKEITVLP 301

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VV++     G++H  DLL  G
Sbjct: 302 VVNEEGMLTGMIHLHDLLGKG 322


>gi|78355382|ref|YP_386831.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217787|gb|ABB37136.1| KpsF/GutQ family protein [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
          Length = 334

 Score =  311 bits (797), Expect = 9e-83,   Method: Composition-based stats.
 Identities = 122/332 (36%), Positives = 187/332 (56%), Gaps = 7/332 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T+      +   +  A   +  E  G++++   L G     F  A+  +    GRVVIT
Sbjct: 1   MTQDAQCTRRTDWIPLAREVLDIEIEGIAAMRDRLNG----GFVDALTLMARCTGRVVIT 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSG +G KLA+TL+STGTP+FF+H  E +HGD+GM+  DD+II +S SG +DEL AI
Sbjct: 57  GLGKSGLVGRKLAATLSSTGTPAFFLHPVEGAHGDMGMLRSDDVIIAISNSGETDELNAI 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L   R     LIA+T   +S +A  AD+VL      E+CP  LAPT S    LA+GDALA
Sbjct: 117 LPALRSLGASLIAMTGGLESTLAKSADVVLDTGVRREACPLNLAPTASTTAVLAMGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + L+  ++F+ENDF   HPGG LG       + +   +++P+V+      +A+ +L E R
Sbjct: 177 VCLIHWKSFTENDFLRFHPGGSLGHRLSMRVESLMHTENLPVVRETVRTGEALRVLDEGR 236

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G V V D   +L GI+T+GD+ R   ++        V +VM+++P    ++  +   + 
Sbjct: 237 LGTVLVTDGQGRLSGILTDGDVRRMVCREAGVETASPVANVMVRSPLTARKEFSVAQLID 296

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++ +  I+VL +  D    +G+VH  DLL  G
Sbjct: 297 MMEERAITVLPITGDDGLLLGVVHLHDLLGKG 328


>gi|215488021|ref|YP_002330452.1| D-arabinose 5-phosphate isomerase [Escherichia coli O127:H6 str.
           E2348/69]
 gi|312965616|ref|ZP_07779846.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
 gi|215266093|emb|CAS10513.1| predicted phosphosugar-binding protein [Escherichia coli O127:H6
           str. E2348/69]
 gi|312289765|gb|EFR17655.1| arabinose 5-phosphate isomerase [Escherichia coli 2362-75]
          Length = 321

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|328794425|ref|XP_003252062.1| PREDICTED: arabinose 5-phosphate isomerase-like, partial [Apis
           mellifera]
          Length = 284

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 124/277 (44%), Positives = 177/277 (63%), Gaps = 3/277 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
           F  AV  I   +GRV+ITG+GKSGHIG K+A+++ASTGTP++FVH AEA HGDLGMI   
Sbjct: 1   FAEAVTTILDCRGRVIITGMGKSGHIGRKIAASMASTGTPAYFVHPAEAGHGDLGMIVDG 60

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D++I LS SG S+E+ A++   +R  + LI IT +  S +A HADI L      E+CP G
Sbjct: 61  DVLIALSNSGESEEILALIPAIKRKHVQLICITGKTSSSMAKHADIHLCAHVSQEACPLG 120

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIP 231
           LAPT+S    + +GDAL +ALL +R F+  DF + HP G LG  L +  +DVMH G  +P
Sbjct: 121 LAPTSSTTAVMVLGDALTVALLRARQFTPEDFALSHPAGSLGKRLLLTVADVMHGGQDMP 180

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVM 289
           LV+   PL +AI  +SEK  G + VV+   +L G+ T+GD+ R F  +  L    + DVM
Sbjct: 181 LVQEDTPLREAIVTMSEKGLGMLLVVNTAGELCGLFTDGDLRRLFQDNQQLKEWLMADVM 240

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
              PK I  D L T A++++++++++ L V+D   + 
Sbjct: 241 GHTPKTITADRLATEALKIMQENHVNGLAVIDANNRP 277



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)

Query: 283 LSVEDVMIKN---PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+V DVM      P  + EDT L  A+  + +  + +L+VV+   +  G+    DL R 
Sbjct: 167 LTVADVMHGGQDMPL-VQEDTPLREAIVTMSEKGLGMLLVVNTAGELCGLFTDGDLRRL 224


>gi|330819904|ref|YP_004348766.1| KpsF/GutQ family protein [Burkholderia gladioli BSR3]
 gi|327371899|gb|AEA63254.1| KpsF/GutQ family protein [Burkholderia gladioli BSR3]
          Length = 311

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 173/315 (54%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + + + ++ A +    E R L+ + + L       F  AVE I A  GR+V+ G+GKSG 
Sbjct: 1   MTRQNHLESARQVFDIESRALAGVAARL----DASFEQAVELILASNGRLVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+A+TL+STGTP+FF+H  EA HGDLGM+T  D+ + +S SG +DE+  ++ + R  
Sbjct: 57  VGRKIAATLSSTGTPAFFMHPGEAYHGDLGMVTPGDVFLAISNSGETDEVIKLIPFLRGN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LIA+T  + S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R
Sbjct: 117 GNVLIALTGNSASTLARAARLHLDVGVEREACPLQLAPTASTTATLAMGDALAVTLMRAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F    F   HPGG LG   +C  D   + +++P V    P +D +  ++  R G   V 
Sbjct: 177 GFQPEHFARFHPGGSLGRRLLCTVDDEMARENLPFVNEDTPTLDVLDAMTHGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                  GI+T+GDI R   +    +   +  D+M   P  +   T +  A+ L++Q  I
Sbjct: 237 RVLG--WGIVTDGDIRRAIERHGDAVLRRTAADMMSIAPSTVRPGTRIEDALLLMQQQGI 294

Query: 315 SVLMVVDDCQKAIGI 329
             L+V+D C+  +G+
Sbjct: 295 GALLVIDGCE-VVGV 308


>gi|218547784|ref|YP_002381575.1| D-arabinose 5-phosphate isomerase [Escherichia fergusonii ATCC
           35469]
 gi|218355325|emb|CAQ87932.1| putative phosphosugar-binding protein [Escherichia fergusonii ATCC
           35469]
          Length = 321

 Score =  311 bits (797), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 123/325 (37%), Positives = 183/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKLTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +L  +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTAGGTTLLSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K +G ++  D  + GII
Sbjct: 297 APVVDENGKLVGAINLQDFYQAGII 321


>gi|217421125|ref|ZP_03452630.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
 gi|217396537|gb|EEC36554.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 576]
          Length = 351

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 113/323 (34%), Positives = 173/323 (53%), Gaps = 10/323 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+
Sbjct: 33  SMAYDGSQMNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVV 88

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 89  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 148

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 149 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 208

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 209 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 268

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 269 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 326

Query: 307 QLLRQHNISVLMVVDDCQKAIGI 329
            ++    I+ L+V D     +G+
Sbjct: 327 LMMEARRINALLVFDGED-VVGV 348


>gi|281179712|dbj|BAI56042.1| conserved hypothetical protein [Escherichia coli SE15]
          Length = 321

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M  +   +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVDGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|218696299|ref|YP_002403966.1| D-arabinose 5-phosphate isomerase [Escherichia coli 55989]
 gi|218353031|emb|CAU98856.1| putative phosphosugar-binding protein [Escherichia coli 55989]
 gi|323183231|gb|EFZ68628.1| arabinose 5-phosphate isomerase [Escherichia coli 1357]
          Length = 321

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 180/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  +      ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALQNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|161986464|ref|YP_311691.2| D-arabinose 5-phosphate isomerase [Shigella sonnei Ss046]
 gi|323167120|gb|EFZ52838.1| arabinose 5-phosphate isomerase [Shigella sonnei 53G]
          Length = 321

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 180/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGT +FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTSAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|258648426|ref|ZP_05735895.1| arabinose 5-phosphate isomerase [Prevotella tannerae ATCC 51259]
 gi|260851174|gb|EEX71043.1| arabinose 5-phosphate isomerase [Prevotella tannerae ATCC 51259]
          Length = 316

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 111/313 (35%), Positives = 178/313 (56%), Gaps = 8/313 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A+  +  E   +  L  ++  +    F  AVE I    G++++TG+GKSGHIG+
Sbjct: 2   SKYIDVAINCLRDEAEAVLHLIDNINAD----FDKAVELILQCSGKLIVTGVGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTPSFFV+  +  HGDLG+IT++D+++ LS SG +DEL   L Y     IP
Sbjct: 58  KIAATLSSTGTPSFFVNPLDVFHGDLGVITKEDVVLALSNSGQTDELLRFLPYLLEQKIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I +T   KS +A ++ + L      E+ P GLAPT+S    LA+GDALA AL+++R+F 
Sbjct: 118 VIGMTGNPKSPLAQNSTVHLNAAVAKEAGPLGLAPTSSTTAALAMGDALACALMDARDFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG LG   +  +  +   + +P++     L +A+  +S  R G + V  E 
Sbjct: 178 ASDFAQFHPGGTLGRRLLTKAKDIMRTEDLPVISPTMLLGEAVIHVSNGRLG-LCVAQEE 236

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            K+ GIIT+GDI R       +    +V +VM + PK +  +  ++    +L  + I  +
Sbjct: 237 GKIVGIITDGDIRRAIQASRDNFFQTTVAEVMTRTPKTVSPEAKVSEIESILNTNKIHCV 296

Query: 318 MVVDDCQKAIGIV 330
           +V     + +GIV
Sbjct: 297 LVTAPDGRLLGIV 309


>gi|262392559|ref|YP_003284413.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
 gi|262336153|gb|ACY49948.1| arabinose 5-phosphate isomerase [Vibrio sp. Ex25]
          Length = 329

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 120/320 (37%), Positives = 189/320 (59%), Gaps = 6/320 (1%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             S  +   +     +   +   L+ +  S+  E   Q+  A+  I   +G V++ G+GK
Sbjct: 11  SISDEQKPVLASVAETFKHQANALNEMAKSIDFE---QYQKAISYIIDCQGHVIVCGMGK 67

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGH+G K+++TLASTGTPSFF+H +EA HGDLGMIT++D+I+++S SG +DE+  ++   
Sbjct: 68  SGHVGKKISATLASTGTPSFFLHPSEAFHGDLGMITKEDVIVLISNSGETDEVLQLIPSL 127

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + F   +I+IT    S ++ ++D  L L +  ESCP+ LAPTTS  + +A+GDALA+AL+
Sbjct: 128 KSFGNKVISITGRIDSTMSRNSDATLLLAQIQESCPNNLAPTTSTTLTIALGDALAVALM 187

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + R F  NDF   HPGG LG   +       + +++PLV +   +   I  ++E R G  
Sbjct: 188 KMRQFMPNDFARFHPGGSLGRRLLTRVRDEMNAENLPLVDVSDSMTSVIIKMNEGRRGVA 247

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V++    LKGIIT+GD+ R   K  + N+L   DVM   PK   +  +L  A + +RQ 
Sbjct: 248 IVIENNG-LKGIITDGDLRRALAKEAEFNSLKAGDVMTVEPKTCYDTEMLADAEEKMRQF 306

Query: 313 NISVLMVVDDCQKAIGIVHF 332
           +IS L+V+DD  K +G++  
Sbjct: 307 SISSLVVLDDESKVVGLIQI 326


>gi|26249103|ref|NP_755143.1| D-arabinose 5-phosphate isomerase [Escherichia coli CFT073]
 gi|91212067|ref|YP_542053.1| D-arabinose 5-phosphate isomerase [Escherichia coli UTI89]
 gi|117624939|ref|YP_853927.1| D-arabinose 5-phosphate isomerase [Escherichia coli APEC O1]
 gi|218559696|ref|YP_002392609.1| D-arabinose 5-phosphate isomerase [Escherichia coli S88]
 gi|218690830|ref|YP_002399042.1| D-arabinose 5-phosphate isomerase [Escherichia coli ED1a]
 gi|227888244|ref|ZP_04006049.1| D-arabinose 5-phosphate isomerase [Escherichia coli 83972]
 gi|237706672|ref|ZP_04537153.1| GutQ protein [Escherichia sp. 3_2_53FAA]
 gi|300976914|ref|ZP_07173666.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|301049543|ref|ZP_07196498.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           185-1]
 gi|331648426|ref|ZP_08349514.1| protein GutQ [Escherichia coli M605]
 gi|331658813|ref|ZP_08359755.1| protein GutQ [Escherichia coli TA206]
 gi|331684320|ref|ZP_08384912.1| protein GutQ [Escherichia coli H299]
 gi|26109510|gb|AAN81713.1|AE016765_115 GutQ protein [Escherichia coli CFT073]
 gi|91073641|gb|ABE08522.1| GutQ protein [Escherichia coli UTI89]
 gi|115514063|gb|ABJ02138.1| putative phosphosugar-binding protein [Escherichia coli APEC O1]
 gi|218366465|emb|CAR04217.1| putative phosphosugar-binding protein [Escherichia coli S88]
 gi|218428394|emb|CAR09320.2| putative phosphosugar-binding protein [Escherichia coli ED1a]
 gi|226899712|gb|EEH85971.1| GutQ protein [Escherichia sp. 3_2_53FAA]
 gi|227834513|gb|EEJ44979.1| D-arabinose 5-phosphate isomerase [Escherichia coli 83972]
 gi|294491679|gb|ADE90435.1| gutQ protein [Escherichia coli IHE3034]
 gi|300298668|gb|EFJ55053.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           185-1]
 gi|300409928|gb|EFJ93466.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 45-1]
 gi|307554682|gb|ADN47457.1| predicted phosphosugar-binding protein [Escherichia coli ABU 83972]
 gi|315289204|gb|EFU48602.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           110-3]
 gi|315293664|gb|EFU53016.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS
           153-1]
 gi|315298706|gb|EFU57960.1| putative arabinose 5-phosphate isomerase [Escherichia coli MS 16-3]
 gi|320194842|gb|EFW69471.1| Glucitol operon GutQ protein [Escherichia coli WV_060327]
 gi|323951074|gb|EGB46950.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H252]
 gi|323957082|gb|EGB52807.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli H263]
 gi|330908739|gb|EGH37253.1| glucitol operon GutQ protein [Escherichia coli AA86]
 gi|331042173|gb|EGI14315.1| protein GutQ [Escherichia coli M605]
 gi|331053395|gb|EGI25424.1| protein GutQ [Escherichia coli TA206]
 gi|331077935|gb|EGI49141.1| protein GutQ [Escherichia coli H299]
          Length = 321

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|167854514|ref|ZP_02477295.1| arabinose-5-phosphate isomerase [Haemophilus parasuis 29755]
 gi|167854269|gb|EDS25502.1| arabinose-5-phosphate isomerase [Haemophilus parasuis 29755]
          Length = 311

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 124/306 (40%), Positives = 187/306 (61%), Gaps = 6/306 (1%)

Query: 31  IIAEKRGL-SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           I  E   L +   S L   LS  F+ AV+ I   +GRVV+ GIGKSG +G K+ +T AST
Sbjct: 6   IANEALHLYTQAISRLNQHLSEAFNQAVDMILNCEGRVVVAGIGKSGLVGKKMVATFAST 65

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSFF+H  EA HGDLGM+   D++I++S+SG +D++  ++   + F   +IA+T   +
Sbjct: 66  GTPSFFLHPTEAFHGDLGMLKPIDVVILISYSGETDDVNKLIPSLKNFGNKIIAMTGNLQ 125

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A HADI L +  E E+CP+ LAPTTS+++ +A+GD LAIAL+++R+F   DF   HP
Sbjct: 126 STLARHADITLDISIEREACPNNLAPTTSSLVTMALGDVLAIALIKARDFKAEDFARFHP 185

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG LG   +C    +       +  + C   D + +++E R G VA+V E ++L GIIT+
Sbjct: 186 GGSLGRKLLCRVRDVMQKKLPIICPL-CSFSDCLNVMNEGRMG-VAIVMENEQLLGIITD 243

Query: 270 GDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           GDI R   K   +    + +++M  NPK IL+ T L  A + +++ +I  L+ V++  K 
Sbjct: 244 GDIRRTLAKFGAESLNKTAQEIMSCNPKTILDSTFLAHAEEYMKEKHIHSLIAVNEAGKV 303

Query: 327 IGIVHF 332
            GIV F
Sbjct: 304 TGIVEF 309


>gi|325578162|ref|ZP_08148297.1| arabinose-5-phosphate isomerase [Haemophilus parainfluenzae ATCC
           33392]
 gi|325159898|gb|EGC72027.1| arabinose-5-phosphate isomerase [Haemophilus parainfluenzae ATCC
           33392]
          Length = 311

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 119/299 (39%), Positives = 177/299 (59%), Gaps = 9/299 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  ++  E + L+ L   L  E    F   V+ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLQIARETLSVESQALAQLSQRLDDE----FSQVVDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +R+F  
Sbjct: 118 IALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARHFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+        D ++I++E R G   V+ E Q
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTR-LPITTPDTSFTDCLSIMNEGRMGVALVM-ENQ 235

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +LKGIIT+GD+ R       D    + +++M  +PK I E+  L  A  L+++  I  L
Sbjct: 236 QLKGIITDGDVRRALTANGADTLNKTAKELMTSSPKTIHENEFLAKAEDLMKEKKIHSL 294


>gi|306816718|ref|ZP_07450850.1| Polysialic acid capsule expression protein [Escherichia coli NC101]
 gi|305850283|gb|EFM50742.1| Polysialic acid capsule expression protein [Escherichia coli NC101]
          Length = 339

 Score =  311 bits (796), Expect = 1e-82,   Method: Composition-based stats.
 Identities = 119/314 (37%), Positives = 178/314 (56%), Gaps = 6/314 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  +   L +L   L    S Q+   +  I   KG V+++G+ KSGH+G K+
Sbjct: 30  LITSVRQTLAEQGAALQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMDKSGHVGRKM 86

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 87  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 146

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 147 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 206

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 207 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 265

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++H +S L+V 
Sbjct: 266 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKHRVSTLLVT 325

Query: 321 DDCQKAIGIVHFLD 334
           +   K  G+V   D
Sbjct: 326 NKANKVTGLVRIFD 339


>gi|303252630|ref|ZP_07338793.1| hypothetical protein APP2_1608 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|307247389|ref|ZP_07529436.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|307260862|ref|ZP_07542548.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
 gi|302648598|gb|EFL78791.1| hypothetical protein APP2_1608 [Actinobacillus pleuropneumoniae
           serovar 2 str. 4226]
 gi|306856086|gb|EFM88242.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 2
           str. S1536]
 gi|306869429|gb|EFN01220.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 12
           str. 1096]
          Length = 311

 Score =  311 bits (796), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 114/311 (36%), Positives = 184/311 (59%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++ A  ++    + ++ L       L   F+ AVE I   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLESAKETLSFYSQAINQL----NQRLDSSFNQAVEMILNCEGRVVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D++I++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNQI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HA+++L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R F  
Sbjct: 118 IAMTGNPNSTLAQHANLILNISVEREACPNNLAPTTSTLVTMALGDALAIALINARGFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +     +P+ +        +++++E R G   ++ + +
Sbjct: 178 EDFARFHPGGSLGRKLLNRVKDVMQTK-LPITQPNADFSTILSVINEGRMGVALIM-QDE 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +LKGIIT+GDI R   K   +  T + E +M K PK I + T L  A +++++ +I  L+
Sbjct: 236 QLKGIITDGDIRRTLAKFGAESLTKTAEQIMSKQPKTISDTTYLAKAEEMMKELHIHSLI 295

Query: 319 VVDDCQKAIGI 329
            ++D  K  GI
Sbjct: 296 ALNDEGKVSGI 306


>gi|319940536|ref|ZP_08014879.1| sugar phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
 gi|319805902|gb|EFW02660.1| sugar phosphate isomerase [Sutterella wadsworthensis 3_1_45B]
          Length = 326

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 133/328 (40%), Positives = 188/328 (57%), Gaps = 8/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            S+  +  +    R    E++ L  +E     +L   F  AV  I   KG V+ +G+GKS
Sbjct: 3   MSMTDDEILAEGCRVFNLERQALEKVE----NDLGAPFVAAVRLILQTKGNVIFSGVGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG KLA+T +STGT SFFVH+ EA+HGDLGMI   D+ + +S+SG S EL   +   +
Sbjct: 59  GHIGRKLAATFSSTGTTSFFVHSDEAAHGDLGMIRPGDVFVGISFSGESSELMTCVPALK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              IP+IA+T + +S +A  AD+ L    + E+CP  LAPT S  + +A+GDA+A AL+ 
Sbjct: 119 AMGIPIIAMTGKPRSSLARVADVALVTAIDREACPLNLAPTASTTVTMALGDAIAGALII 178

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +++FS  DF   HP G LG    +  SDVM   ++IP V +  P +DA+ +L++K  GC 
Sbjct: 179 AKSFSAEDFARSHPAGALGRRLLMKVSDVMRGPENIPTVGLDDPAMDALDVLAKKHLGCF 238

Query: 255 AVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V D   KL GI TEGD  R      DL +L   D+M   PK +  D     AM L+R+ 
Sbjct: 239 VVTD-HGKLAGIFTEGDFIRALKNDTDLKSLKARDLMNPTPKSVQADESAFYAMSLIRKF 297

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            I+ L+VVDD    +G+VH  DL+   I
Sbjct: 298 QINQLVVVDDRNAVVGLVHIHDLVAAKI 325


>gi|32266671|ref|NP_860703.1| hypothetical protein HH1172 [Helicobacter hepaticus ATCC 51449]
 gi|32262722|gb|AAP77769.1| conserved hypothetical protein [Helicobacter hepaticus ATCC 51449]
          Length = 322

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 111/325 (34%), Positives = 182/325 (56%), Gaps = 7/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK      A   +  E   L      L G++       VE I   +G+VV+ G+GKSG I
Sbjct: 1   MKLDYALVAKEVLEIESASLLQATKRLNGKI---LESIVECIINSQGKVVVCGVGKSGLI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+++TL+STGTPS F+H  EA HGDLG++ ++D+++ +S+SG S+EL  IL + +R  
Sbjct: 58  GAKISATLSSTGTPSVFMHPTEAMHGDLGLLQKNDIVLAISYSGKSEELLNILPHIKRLG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            P+I ++ +  S ++   D  L +  + E+CP  +APT+S  + LA+GDALA+ L++ R+
Sbjct: 118 NPIITMSKDINSPLSRMGDYFLDISIQKEACPLNIAPTSSTTLTLALGDALAVCLMKRRD 177

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F  N+F   HPGG LG         +   +++PL+    PL  AI I+S+KR G   +  
Sbjct: 178 FKANNFASFHPGGALGKQLFVKLKDLMQIENLPLISPDLPLSQAIIIMSQKRLGSAIIT- 236

Query: 259 EGQKLKGIITEGDIFRN-FHKDLN-TLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNIS 315
           +   L GI+++GD+ R   +KD +    V     +NPK     D L   A++ + ++ I 
Sbjct: 237 QNDALWGILSDGDLRRAMMNKDFDLNAPVSIYATRNPKTCDNPDILAFDALKFMEENKIQ 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L++ +      G++H   L+  GI
Sbjct: 297 LLIITNKQNHIQGVIHLHTLIAAGI 321


>gi|254229453|ref|ZP_04922868.1| polysialic acid capsule expression protein KpsF [Vibrio sp. Ex25]
 gi|151938024|gb|EDN56867.1| polysialic acid capsule expression protein KpsF [Vibrio sp. Ex25]
          Length = 339

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 120/320 (37%), Positives = 189/320 (59%), Gaps = 6/320 (1%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             S  +   +     +   +   L+ +  S+  E   Q+  A+  I   +G V++ G+GK
Sbjct: 21  SISDEQKPVLASVAETFKHQANALNEMAKSIDFE---QYQKAISYIIDCQGHVIVCGMGK 77

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGH+G K+++TLASTGTPSFF+H +EA HGDLGMIT++D+I+++S SG +DE+  ++   
Sbjct: 78  SGHVGKKISATLASTGTPSFFLHPSEAFHGDLGMITKEDVIVLISNSGETDEVLQLIPSL 137

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + F   +I+IT    S ++ ++D  L L +  ESCP+ LAPTTS  + +A+GDALA+AL+
Sbjct: 138 KSFGNKVISITGRIDSTMSRNSDATLLLAQIQESCPNNLAPTTSTTLTIALGDALAVALM 197

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + R F  NDF   HPGG LG   +       + +++PLV +   +   I  ++E R G  
Sbjct: 198 KMRQFMPNDFARFHPGGSLGRRLLTRVRDEMNAENLPLVDVSDSMTSVIIKMNEGRRGVA 257

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            V++    LKGIIT+GD+ R   K  + N+L   DVM   PK   +  +L  A + +RQ 
Sbjct: 258 IVIENNG-LKGIITDGDLRRALAKEAEFNSLKAGDVMTVEPKTCYDTEMLADAEEKMRQF 316

Query: 313 NISVLMVVDDCQKAIGIVHF 332
           +IS L+V+DD  K +G++  
Sbjct: 317 SISSLVVLDDESKVVGLIQI 336


>gi|293415957|ref|ZP_06658597.1| gutQ [Escherichia coli B185]
 gi|291432146|gb|EFF05128.1| gutQ [Escherichia coli B185]
          Length = 321

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQAQSRAINAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|222823333|ref|YP_002574907.1| arabinose-5-phosphate isomerase [Campylobacter lari RM2100]
 gi|222538555|gb|ACM63656.1| arabinose-5-phosphate isomerase [Campylobacter lari RM2100]
          Length = 318

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 114/318 (35%), Positives = 186/318 (58%), Gaps = 9/318 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +   ++ A      E + +  L  +L  E    F  AVE I +IKGR V++G+GKSGH
Sbjct: 1   MSQIDAIKIAKEVFEIESKTILDLCDTLNEE----FSKAVELILSIKGRCVVSGMGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+A+TLASTGTPSFF+H  EA HGDLGMI  +D+++ +S SG ++E+  ++   ++ 
Sbjct: 57  VGAKIAATLASTGTPSFFMHPGEALHGDLGMIASEDVLLAISNSGETEEVLKLIPVIKKR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPLI +  +  S +A  AD+ + +  + E+CP  LAPT+S    LA+GDA+A+AL+++R
Sbjct: 117 KIPLIVMAGDQNSTLAKQADVFINIAVKKEACPLQLAPTSSTTATLAMGDAIAVALMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           NF  +DF + HPGG LG   +     +    ++P+V       + + +++  + G   VV
Sbjct: 177 NFKPDDFALFHPGGSLGRKLLTKVGDLMVSSNLPIVSPNSEFNELVDVMTSGKLGLCIVV 236

Query: 258 DEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E +KL GIIT+GD+ R      K       +++M ++PK I    + + A +L+ +H I
Sbjct: 237 -ENEKLVGIITDGDLRRALRANDKPRFDFKAKEIMSESPKTIEASAMASEAEELMLKHKI 295

Query: 315 SVLMVVDDCQKAIGIVHF 332
              +VV   +K  GI+  
Sbjct: 296 KE-IVVTQNEKIAGIIQL 312


>gi|294674307|ref|YP_003574923.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
 gi|294473755|gb|ADE83144.1| sugar isomerase, KpsF/GutQ family [Prevotella ruminicola 23]
          Length = 316

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 115/313 (36%), Positives = 185/313 (59%), Gaps = 8/313 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            +T   A++ I  E   + SL      +L   F  AVE I   KG+V++TG+GKSGHIG+
Sbjct: 2   KTTRDIAIQCIKDEAEAVLSLI----PQLDENFDKAVELILNCKGKVIVTGVGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTPSFF +  +  HGDLG++T+DD+++ +S SG +DEL   +       IP
Sbjct: 58  KIAATLSSTGTPSFFTNPLDVFHGDLGVMTQDDVVLAISNSGQTDELLRFIPMVLHMQIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I ++   KS++A ++   L +  E E+CP  LAPT+S   QL +GDALAIAL+E RNF 
Sbjct: 118 IIGMSGNPKSLLAKYSTYHLNVQVEKEACPLNLAPTSSTTAQLTMGDALAIALMEKRNFQ 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG+LG   +  +  +   + +P++     L +AI ++S+ + G + +    
Sbjct: 178 PRDFAQFHPGGELGKRLLTTAQDVMRTEDMPVLPPEMHLGEAIILVSKAKLG-LGIAMVN 236

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            ++ G+IT+GDI R   K        +V D+M + PK++  DT +T   +++ Q+ +  +
Sbjct: 237 NEIVGLITDGDIRRAMEKWQAQFFDRTVSDIMTRTPKMVKPDTKITEIQRIMNQYKVHSV 296

Query: 318 MVVDDCQKAIGIV 330
           +V D     +G+V
Sbjct: 297 LVTDGENHLLGVV 309


>gi|32034732|ref|ZP_00134863.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|165975848|ref|YP_001651441.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 3
           str. JL03]
 gi|190149680|ref|YP_001968205.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|307245217|ref|ZP_07527308.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307249609|ref|ZP_07531595.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|307254164|ref|ZP_07536009.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|307256432|ref|ZP_07538214.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|307258627|ref|ZP_07540362.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|307262988|ref|ZP_07544610.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
 gi|165875949|gb|ABY68997.1| probable phosphosugar isomerase [Actinobacillus pleuropneumoniae
           serovar 3 str. JL03]
 gi|189914811|gb|ACE61063.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|306853861|gb|EFM86075.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|306858307|gb|EFM90377.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 4
           str. M62]
 gi|306862864|gb|EFM94813.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 9
           str. CVJ13261]
 gi|306865062|gb|EFM96963.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306867284|gb|EFM99137.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 11
           str. 56153]
 gi|306871614|gb|EFN03336.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 13
           str. N273]
          Length = 311

 Score =  310 bits (795), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/311 (36%), Positives = 187/311 (60%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +S L   L G     F+ AVE +   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLASANETLSLYAQAISQLNQRLDG----AFNQAVEMVLNCEGRVVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D++I++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HA+++L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F  
Sbjct: 118 IAMTGNPNSTLAQHANLILNIGVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +     +P+ +        +++++E R G   ++ +G+
Sbjct: 178 EDFARFHPGGSLGRKLLNRVKDVMQTK-LPIAQPNADFSTILSVMNEGRMGVALIM-QGE 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R   +   D    + E +M K+PK + ++T L  A +++++ +I  L+
Sbjct: 236 QLQGIITDGDIRRTLAQFGTDSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLI 295

Query: 319 VVDDCQKAIGI 329
            ++D  K  GI
Sbjct: 296 ALNDEGKVSGI 306


>gi|53720379|ref|YP_109365.1| putative capsule expression protein [Burkholderia pseudomallei
           K96243]
 gi|52210793|emb|CAH36779.1| putative capsule expression protein [Burkholderia pseudomallei
           K96243]
          Length = 331

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 113/323 (34%), Positives = 173/323 (53%), Gaps = 10/323 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           S+   G  +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+
Sbjct: 13  SMAHDGSQMNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVV 68

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+GKSG IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  
Sbjct: 69  CGMGKSGIIGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIK 128

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ + +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDAL
Sbjct: 129 LIPFLKSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDAL 188

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+ L+++R F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  
Sbjct: 189 AVTLMKARGFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRG 248

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAM 306
           R G   V  E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+
Sbjct: 249 RLGLAIVRRETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDAL 306

Query: 307 QLLRQHNISVLMVVDDCQKAIGI 329
            ++    I+ L+V D     +G+
Sbjct: 307 LMMEARRINALLVFDGED-VVGV 328


>gi|301156064|emb|CBW15535.1| D-arabinose 5-phosphate isomerase [Haemophilus parainfluenzae T3T1]
          Length = 311

 Score =  310 bits (794), Expect = 2e-82,   Method: Composition-based stats.
 Identities = 120/299 (40%), Positives = 176/299 (58%), Gaps = 9/299 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  ++  E + L  L   L  E    F   V+ I A +GR+VI GIGKSG IG K
Sbjct: 2   NYLQIARETLSVESQALKQLSQRLDDE----FSQVVDLILACEGRLVIGGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +R+F  
Sbjct: 118 IALTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARHFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+        D +TI++E R G   V+ E Q
Sbjct: 178 ADFAKFHPGGSLGRRLLCKVKDQMQTR-LPITTPDTSFTDCLTIMNEGRMGVALVM-ENQ 235

Query: 262 KLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +LKGIIT+GD+ R       D    + +++M  +PK I E+  L  A  L+++  I  L
Sbjct: 236 QLKGIITDGDVRRALTANGADTLNKTAKELMTSSPKTIHENEFLAKAEDLMKEKKIHSL 294


>gi|219872158|ref|YP_002476533.1| arabinose-5-phosphate isomerase [Haemophilus parasuis SH0165]
 gi|219692362|gb|ACL33585.1| arabinose-5-phosphate isomerase [Haemophilus parasuis SH0165]
          Length = 311

 Score =  310 bits (794), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 123/306 (40%), Positives = 188/306 (61%), Gaps = 6/306 (1%)

Query: 31  IIAEKRGL-SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           I  E   L +   S L   LS  F+ AV+ I   +GRVV+ GIGKSG +G K+ +T AST
Sbjct: 6   IANEALHLYTQAISRLNQHLSEAFNQAVDMILNCEGRVVVAGIGKSGLVGKKMVATFAST 65

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSFF+H  EA HGDLGM+   D++I++S+SG +D++  ++   + F   +IA+T   +
Sbjct: 66  GTPSFFLHPTEAFHGDLGMLKPIDVVILISYSGETDDVNKLIPSLKNFGNKIIAMTGNLQ 125

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A HADI L +    E+CP+ LAPTTS+++ +A+GD LAIAL+++R+F   DF   HP
Sbjct: 126 STLAHHADITLDISIGREACPNNLAPTTSSLVTMALGDVLAIALIKARDFKAEDFARFHP 185

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG LG   +C    +       +  + C   D + +++E R G VA+V E ++L+GIIT+
Sbjct: 186 GGSLGRKLLCRVRDVMQKKLPIICPL-CSFSDCLNVMNEGRMG-VAIVMENEQLQGIITD 243

Query: 270 GDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           GDI R   K   +    + +++M +NPK IL+ T L  A + +++ +I  L+ V++  K 
Sbjct: 244 GDIRRTLAKFGAESLNKTAQEIMSRNPKTILDSTFLAHAEEYMKEKHIHSLIAVNEAGKV 303

Query: 327 IGIVHF 332
            GIV F
Sbjct: 304 TGIVEF 309


>gi|326624568|gb|EGE30913.1| gutQ protein [Salmonella enterica subsp. enterica serovar Dublin
           str. 3246]
          Length = 308

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 122/302 (40%), Positives = 173/302 (57%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPLSPLGRAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R      
Sbjct: 187 HHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|126207871|ref|YP_001053096.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           L20]
 gi|126096663|gb|ABN73491.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 311

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 113/314 (35%), Positives = 188/314 (59%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +S L   L G     F+ AVE +   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLASANETLSLYAQAISQLNQRLDG----AFNQAVEMVLNCEGRVVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D++I++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HA+++L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F  
Sbjct: 118 IAMTGNPNSTLAQHANLILNIGVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +     +P+ +        +++++E R G   ++ +G+
Sbjct: 178 EDFARFHPGGSLGRKLLNRVKDVMQTK-LPIAQPNADFSTILSVMNEGRMGVALIM-QGE 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R   +   D    + E +M K+PK + ++T L  A +++++ +I  L+
Sbjct: 236 QLQGIITDGDIRRTLAQFGTDSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
            ++D  K  GI+  
Sbjct: 296 ALNDEGKVSGIMEL 309


>gi|282877371|ref|ZP_06286194.1| putative arabinose 5-phosphate isomerase [Prevotella buccalis ATCC
           35310]
 gi|281300423|gb|EFA92769.1| putative arabinose 5-phosphate isomerase [Prevotella buccalis ATCC
           35310]
          Length = 324

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 113/307 (36%), Positives = 185/307 (60%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I  E + L  L      +L   F  AV+ +   KG++++TG+GKSG++G+K+A+TL
Sbjct: 16  ASQCIKDEAQALLELI----PQLDENFEKAVDMMFNCKGKIIVTGVGKSGNVGAKIAATL 71

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+F+++  +  HGDLG++T DD+++ LS SG +DEL   L      ++P+++I+ 
Sbjct: 72  SSTGTPAFYINPLDIYHGDLGVMTPDDVVLALSNSGQTDELLRFLPMVLHMNVPVVSISG 131

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             KS++A ++   +T   E E+CP  LAPT+S    LA+GDALAIAL+  RNF  NDF  
Sbjct: 132 NPKSLLAKYSTAHITCRVEKEACPLNLAPTSSTTAALAMGDALAIALMMVRNFKPNDFAQ 191

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D++P++     L DAI  +S+ + G + V  E +K+ G+
Sbjct: 192 FHPGGELGKRLLTTASDVMRSDNLPIIPKEMHLGDAIIHVSKGKLG-LGVSLENEKVVGL 250

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   K        +V D+M  +PK +  +T +T    ++ ++ I  ++VVD  
Sbjct: 251 ITDGDIRRAMEKWQAQFFDKTVSDIMTTSPKTVSPNTKITEIQTIMHKYKIHTVLVVDSD 310

Query: 324 QKAIGIV 330
              +G+V
Sbjct: 311 NHLLGVV 317


>gi|172065194|ref|YP_001815906.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
 gi|171997436|gb|ACB68353.1| KpsF/GutQ family protein [Burkholderia ambifaria MC40-6]
          Length = 310

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 107/303 (35%), Positives = 161/303 (53%), Gaps = 9/303 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ + ++ A +    E R L+ + + L       F  AVE + A  GRVV+ G+GKSG +
Sbjct: 1   MRQNHIESARQVFEIESRALAGVAARL----DANFEEAVEIVLASNGRVVVCGMGKSGIV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STGTP+FF+H  EA HGDLGM+T DD  + +S SG +DE+  ++ + R   
Sbjct: 57  GRKIAATLSSTGTPAFFMHPGEAYHGDLGMVTPDDAFLAISNSGETDEVIKLIPFLRSNG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LIA+T    S +A  A + L +  E E+CP  LAPT S    LA+GDALA+ L+ +R 
Sbjct: 117 NDLIALTGNPASTLAHAARVHLDIGVEREACPLQLAPTASTTATLAMGDALAVTLMRARG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F    F   HPGG LG   +   D   +  ++P V      +D +  ++  R G   V  
Sbjct: 177 FQPEHFARFHPGGSLGRRLLSTVDDEMARRNLPFVTEDTSTLDVLDAMTRGRLGLAIVKR 236

Query: 259 EGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                 GI+T+GDI R   +    +   +  D+M   P  +   T +  A+ L++Q  I 
Sbjct: 237 HAG--WGIVTDGDIRRAIERHGDGVLRRTAADMMSIEPSTVRPGTRVEDALLLMQQQRIG 294

Query: 316 VLM 318
            L+
Sbjct: 295 ALL 297


>gi|254362562|ref|ZP_04978662.1| possible sugar phosphate isomerase [Mannheimia haemolytica PHL213]
 gi|261494714|ref|ZP_05991194.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. OVINE]
 gi|153094165|gb|EDN75058.1| possible sugar phosphate isomerase [Mannheimia haemolytica PHL213]
 gi|261309679|gb|EEY10902.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. OVINE]
          Length = 311

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 111/311 (35%), Positives = 181/311 (58%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +     +L   LS +F+  V  I A +GRVV+ GIGKSG +G K
Sbjct: 2   NHLDSAKETLNLYAQQII----TLNHRLSEEFNEVVNMILACQGRVVVGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +  +AD++L +  E E+C + LAPT+S ++ +A+GDALAIAL+++R+F  
Sbjct: 118 IAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMALGDALAIALMKARDFRP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +          +     + +++++E R G VAV+ +  
Sbjct: 178 EDFARYHPGGSLGRKLLNRVRDVMVRKVPT-ASLDTTFTECLSVMNEGRMG-VAVIMQDD 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL+GIIT+GDI R   K   +    + +++M +NPK I +   L  A  L+++  I  L+
Sbjct: 236 KLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDTEFLAKAEDLMKELKIHSLI 295

Query: 319 VVDDCQKAIGI 329
            V+D  K  G+
Sbjct: 296 AVNDEGKVTGL 306


>gi|194335585|ref|YP_002017379.1| KpsF/GutQ family protein [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308062|gb|ACF42762.1| KpsF/GutQ family protein [Pelodictyon phaeoclathratiforme BU-1]
          Length = 326

 Score =  309 bits (793), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 121/313 (38%), Positives = 186/313 (59%), Gaps = 7/313 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E R +  +   L       F  AVE + + +G+++I+G+GKSG I  K+A+T++STG
Sbjct: 18  LDQEARAIHLIAERL----DESFSAAVELLASCQGKIIISGMGKSGIIAQKIAATMSSTG 73

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           + + F+H A+A+HGDLG++   D +I LS SG+++EL  I+   R+    +IA+T   +S
Sbjct: 74  STALFLHPADAAHGDLGIVGHTDTVICLSKSGTTEELNFIIPALRQIGAKIIAMTGNPRS 133

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  ADI L      E+CP+ LAPTTS    LA+GDALAIAL++ +NF++ DF + HP 
Sbjct: 134 FLAQKADITLDTGIAKEACPYDLAPTTSTTAMLAMGDALAIALMQVKNFTQRDFALTHPK 193

Query: 211 GKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG    V  SD+M  GD++P+V     +   I  ++ KR+G  AV+ +  KL GI T+
Sbjct: 194 GSLGRRLTVKVSDIMAKGDAVPIVSESASVTGLILEMTSKRYGVSAVITDDGKLCGIFTD 253

Query: 270 GDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           GD+ R     ++   LS   VM  NPK +  DT+    + +L    I+ L+V DD Q  +
Sbjct: 254 GDLRRLVQSGREFLNLSAGSVMTANPKTVTGDTMAKECLDILETWRITQLLVCDDEQHPV 313

Query: 328 GIVHFLDLLRFGI 340
           G+VH  DL+  G+
Sbjct: 314 GMVHIHDLIVLGL 326


>gi|261491816|ref|ZP_05988395.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
 gi|261312471|gb|EEY13595.1| putative sugar phosphate isomerase [Mannheimia haemolytica serotype
           A2 str. BOVINE]
          Length = 311

 Score =  309 bits (792), Expect = 3e-82,   Method: Composition-based stats.
 Identities = 109/311 (35%), Positives = 179/311 (57%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +     +L   LS +F+  V  I A +GRVV+ GIGKSG +G K
Sbjct: 2   NHLDSAKETLNLYAQQII----TLNHRLSEEFNEVVNMILACQGRVVVGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDMVILISNSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +  +AD++L +  E E+C + LAPT+S ++ +A+GDALAIAL+++R+F  
Sbjct: 118 IAMTGNPYSTLGRNADVILNIGVEREACLNNLAPTSSTLVTMALGDALAIALMKARDFRP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +          +     + +++++E R G   V+ +  
Sbjct: 178 EDFARYHPGGSLGRKLLNRVRDVMVRKVPT-ASLDTTFTECLSVMNEGRMGGA-VIMQDD 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL+GIIT+GDI R   K   +    + +++M +NPK I +   L  A  L+++  I  L+
Sbjct: 236 KLEGIITDGDIRRTLAKFGAESLNKTADEIMTRNPKTINDTEFLAKAEDLMKELKIHSLI 295

Query: 319 VVDDCQKAIGI 329
            V+D  K  G+
Sbjct: 296 AVNDEGKVTGL 306


>gi|255323627|ref|ZP_05364757.1| arabinose 5-phosphate isomerase [Campylobacter showae RM3277]
 gi|255299341|gb|EET78628.1| arabinose 5-phosphate isomerase [Campylobacter showae RM3277]
          Length = 319

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 118/324 (36%), Positives = 188/324 (58%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A   +  E   L+     L GE    F  AVE +   KG+VV+TG+GKSGH+G+
Sbjct: 2   SDIIKIAANVLKTEANELTRNAEILDGE----FEKAVEVLYKTKGKVVVTGVGKSGHVGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMI +DD ++ +S+SG S+EL  IL + +RF +P
Sbjct: 58  KIAATLASTGTPSFFMHPTEAMHGDLGMIGKDDTLLAISFSGESEELTKILPHVQRFGVP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++A+  +  S +   ++  + L    E+CP   APT+S  + LA+GDALA+ L+E R F 
Sbjct: 118 IVAMARDKFSTLGKFSNSFVKLDVSKEACPLDAAPTSSTTLTLALGDALAVCLMEKRGFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         +   +++P+V+    L  AI  ++  + G V +VD+ 
Sbjct: 178 KEDFANFHPGGSLGKRLFLKVKDVMRSENLPIVRWNASLKQAIDTMTHGKLGTVLIVDKD 237

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISV 316
             L  I+++GD+ R   +   DLN  +++      PK + + + L   A+ L+ ++ I +
Sbjct: 238 GVLDAILSDGDLRRALMREDFDLNDAAIK-YATLKPKELNDKEMLAIDALALIERYKIQL 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L VV +    +G++H  DL   G+
Sbjct: 297 LAVV-ENGVPVGVLHIHDLANLGL 319


>gi|94314654|ref|YP_587863.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
 gi|93358506|gb|ABF12594.1| D-arabinose 5-phosphate isomerase [Cupriavidus metallidurans CH34]
          Length = 320

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 175/314 (55%), Gaps = 7/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
            ++  A + +  E R L ++       +S  F   V+ I ++KGR+V+ G+GKSG IG K
Sbjct: 3   ESISLAKQVVATEIRALEAM----NARVSEDFGRTVKCILSMKGRLVVVGMGKSGLIGRK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T+ASTGTP+F VHA EA HGDLGMI   D+++++S SG ++EL  +L + R  +  +
Sbjct: 59  IAATMASTGTPAFSVHAGEAFHGDLGMIRPTDVVLMISNSGETEELVRLLPFLRHQNNYV 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T +  S +   A+ +L +  E E+C + LAPT+S    L +GDALA+ L   R F  
Sbjct: 119 IAMTGKPASTLGKAANTILDISVEREACNNNLAPTSSTTAALVMGDALAVVLASKRGFQP 178

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +    ++P+        D + +++  R G   V+ +G+
Sbjct: 179 EDFARFHPGGSLGRRLLTRVADVMHKGTLPVCTAQTSFKDVVHVVNRGRMGLALVM-QGE 237

Query: 262 KLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L GIIT+GDI R F    D  ++  ED+M   PK I  D  +  A  LLRQ  I  L+V
Sbjct: 238 RLLGIITDGDIRRGFDTVHDYRSILAEDLMTTRPKAIAPDARVGDAEALLRQEKIGALVV 297

Query: 320 VDDCQKAIGIVHFL 333
            D   + IGI    
Sbjct: 298 QDIDGRVIGIFQMH 311


>gi|88812302|ref|ZP_01127553.1| KpsF/GutQ family protein [Nitrococcus mobilis Nb-231]
 gi|88790553|gb|EAR21669.1| KpsF/GutQ family protein [Nitrococcus mobilis Nb-231]
          Length = 324

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 126/329 (38%), Positives = 190/329 (57%), Gaps = 7/329 (2%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
            +S+     SL +++    A    + + R L    +++  E    F  A++ I    GRV
Sbjct: 1   MQSLIHAVSSLDESTPDSIAAGVFLKQARALEHAATTIGPE----FAQAIDLILGCSGRV 56

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           ++ G+GKSG IG K+A+TLASTGTPSFFVH  EA HGDLGMI  +D+II++S+SG +DE+
Sbjct: 57  IVIGVGKSGLIGKKIAATLASTGTPSFFVHPVEAFHGDLGMIAAEDVIILISFSGETDEV 116

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             ++ + RRF   +I++    +S +A H+DI L  P + ESCP+ LAPTTS  + LA+GD
Sbjct: 117 TRLVPFLRRFGNRIISLIGRAESTLARHSDIALLTPADRESCPNNLAPTTSTTVTLAMGD 176

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           ALA+AL++SR F    F   HPGG LG   +     +     +P+VK    L D +  ++
Sbjct: 177 ALAVALMKSRGFKPERFAAFHPGGSLGRRLLTRVKDVMHAGKLPVVKPDRLLRDCLWEMT 236

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVA 305
             R G V V+D G +  GI+T+GD+ R    D   +   + +VM + P  I E+  L  A
Sbjct: 237 RARLGLVLVLD-GSRAIGIVTDGDLRRALLADPQAMSSPIANVMSRQPVTIHEEEKLADA 295

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             ++R+  I VL+VV+D     G++   D
Sbjct: 296 EMIMRERKIKVLVVVNDEGATTGLLEIFD 324


>gi|198284718|ref|YP_002221039.1| KpsF/GutQ family protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218667398|ref|YP_002427397.1| sugar isomerase, KpsF/GutQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
 gi|198249239|gb|ACH84832.1| KpsF/GutQ family protein [Acidithiobacillus ferrooxidans ATCC
           53993]
 gi|218519611|gb|ACK80197.1| sugar isomerase, KpsF/GutQ family [Acidithiobacillus ferrooxidans
           ATCC 23270]
          Length = 328

 Score =  309 bits (792), Expect = 4e-82,   Method: Composition-based stats.
 Identities = 130/296 (43%), Positives = 179/296 (60%), Gaps = 3/296 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L   F  A E +    GR+V++G+GKSG I  K+A+TLASTG+P+ F+H AE SHGDLGM
Sbjct: 33  LDADFVGACELLLNCSGRIVVSGMGKSGIIAKKIAATLASTGSPALFLHPAEGSHGDLGM 92

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           +TR D ++ LS SG + EL AIL   +R ++PL+A+T   +S +A  A + L      E+
Sbjct: 93  LTRQDCLLALSNSGETAELLAILPVVKRLAVPLLAMTGNPQSTLARTAAVHLNCSVAREA 152

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSG 227
           CP  LAPT S    LA+GDALA+A+L++R FS +DF + HPGG LG  L +   DVMH G
Sbjct: 153 CPLNLAPTASTTASLAMGDALAMAILQARGFSADDFALSHPGGSLGKRLLLRVQDVMHRG 212

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSV 285
           D+IP V +  PL DAI  +S K  G  AVVD   ++ GI T+GD+ R F   ++L    +
Sbjct: 213 DAIPRVGLETPLQDAILEISSKGLGMTAVVDAEDRVVGIFTDGDLRRAFAQRQNLWEQPM 272

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +    P  I    L   A+ L+  H I  L+V D   + IG ++  DLLR GI+
Sbjct: 273 AALAHAQPATIAAGALAAEALALMEHHRIGALLVTDSGARLIGALNMHDLLRAGIV 328


>gi|227540044|ref|ZP_03970093.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33300]
 gi|227240119|gb|EEI90134.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33300]
          Length = 321

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 133/327 (40%), Positives = 196/327 (59%), Gaps = 10/327 (3%)

Query: 19  MKNSTV--QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+T     A+ +I  E + + +L +++  +    F   V +I  IKGRV++TGIGKS 
Sbjct: 1   MKNNTEIKNIAIEAIELEAQSVQNLTNNINED----FVGVVHEILNIKGRVIVTGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  K+ +TL STGTPS F+HAA+A HGDLG++   DLII LS SG++ E+K ++ + ++
Sbjct: 57  IIAQKIVATLNSTGTPSIFLHAADAIHGDLGIVQPQDLIIALSKSGNTPEIKVLVPFLKQ 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               L+AI    +S +A HAD +L    E E+CP+ LAPTTS   QLA+GDALA+ L E 
Sbjct: 117 TQNKLVAIVGNTESFLAQHADYILDTTVEREACPNNLAPTTSTTAQLAMGDALAVVLQEC 176

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R FS+ DF   HPGG LG         +   +  P V     +   I  +++ R G  AV
Sbjct: 177 REFSDRDFAKYHPGGALGKQLYLKVSDLSDQNGKPEVSPEASVRQIIITITQFRLGATAV 236

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +D    + GIIT+GDI R    H+DL+ ++ +D+M K+PK+I ++ L   A+  ++ +NI
Sbjct: 237 ID-QGTILGIITDGDIRRMLETHEDLSHITAKDIMGKSPKLIDKNELAVNALHQMKDNNI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+   +  K  GIVH  DLL+ GII
Sbjct: 296 TQLLAT-EHGKYAGIVHIQDLLKEGII 321


>gi|300771775|ref|ZP_07081646.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33861]
 gi|300761161|gb|EFK57986.1| arabinose-5-phosphate isomerase [Sphingobacterium spiritivorum ATCC
           33861]
          Length = 321

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 131/327 (40%), Positives = 194/327 (59%), Gaps = 10/327 (3%)

Query: 19  MKNSTV--QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           MKN+T     A+ +I  E + + +L +++  +    F   V +I  +KGRV++TGIGKS 
Sbjct: 1   MKNNTQIKNIAIEAIALEAQSVQNLTNNINDD----FVGVVHEILNLKGRVIVTGIGKSA 56

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  K+ +TL STGTPS F+HAA+A HGDLG++   DLII LS SG++ E+K ++ + ++
Sbjct: 57  IIAQKIVATLNSTGTPSIFLHAADAIHGDLGIVQPQDLIIALSKSGNTPEIKVLVPFLKQ 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               L+AI     S +A HAD +L    E E+CP+ LAPTTS   QLA+GDALA+ L E 
Sbjct: 117 TQNKLVAIVGNTGSFLAQHADYILDTTVEREACPNNLAPTTSTTAQLAMGDALAVVLQEC 176

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R FS+ DF   HPGG LG         +   +  P V     +   I  +++ R G  AV
Sbjct: 177 REFSDRDFAKYHPGGALGKQLYLKVSDLSDQNGKPEVSPEASVRQIIITITQFRLGATAV 236

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +D    + GIIT+GDI R    H DL+ ++ +D+M K+PK+I ++ L   A+  ++ +NI
Sbjct: 237 ID-QGTILGIITDGDIRRMLETHDDLSHITAKDIMGKSPKLIDKNELAVNALHQMKDNNI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + L+   +  K  GI+H  DLL+ GII
Sbjct: 296 TQLLAT-ENGKYAGIIHIQDLLKEGII 321


>gi|83720881|ref|YP_441909.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
 gi|83654706|gb|ABC38769.1| carbohydrate isomerase, KpsF/GutQ family [Burkholderia
           thailandensis E264]
          Length = 333

 Score =  309 bits (791), Expect = 5e-82,   Method: Composition-based stats.
 Identities = 112/318 (35%), Positives = 169/318 (53%), Gaps = 10/318 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G  +   + +  A +    E R L+ L + +       F  AV+ I    GRVV+ G+GK
Sbjct: 20  GSQMNDYNYLDSARQVFDIESRALAGLSARV----DESFGDAVDAILRSSGRVVVCGMGK 75

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + 
Sbjct: 76  SGIIGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTPADTFLAISYSGETDEVIKLIPFL 135

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+
Sbjct: 136 KSNRNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLM 195

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           ++R F   +F   HPGG LG   +   D   +   +P V      ID + +++  R G  
Sbjct: 196 KARGFRPENFARFHPGGSLGRRLLSKVDDEMAAGDLPFVDERAQAIDVLQVMTRGRLGLA 255

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            V  E     GIIT+GD+ R      +TL      D+M K+P ++   T +  A+ ++  
Sbjct: 256 IVRRETG--FGIITDGDVRRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMMET 313

Query: 312 HNISVLMVVDDCQKAIGI 329
             I+ L+V D     +G+
Sbjct: 314 RRINALLVFDGED-VVGV 330


>gi|323345348|ref|ZP_08085571.1| arabinose 5-phosphate isomerase [Prevotella oralis ATCC 33269]
 gi|323093462|gb|EFZ36040.1| arabinose 5-phosphate isomerase [Prevotella oralis ATCC 33269]
          Length = 324

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 110/307 (35%), Positives = 185/307 (60%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +  E   +  L      +L   F  AVE I   KG++++TG+GKSG+IG+K+A+TL
Sbjct: 16  ATQCLKDEANAILDLI----PQLDENFSKAVEMIFHCKGKIIVTGVGKSGNIGAKIAATL 71

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      ++P+IA++ 
Sbjct: 72  SSTGTPAFFINPLDVYHGDLGVMTPDDVVLALSNSGQTDELLRFIPMVLHMNVPIIAMSG 131

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A +++I + +    E+CP  LAPT+S    LA+GDALAIAL++ RNF   DF  
Sbjct: 132 NPDSLLAKYSNIHIKVWVSKEACPLNLAPTSSTTAALAMGDALAIALMQVRNFKPQDFAQ 191

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  ++ +   D +P++     L +AI  +S+ + G    + +  K+ G+
Sbjct: 192 FHPGGELGKRLLTTAEDVMRSDDLPIIPQEMHLGEAIIHVSKGKLGLGVSLMDN-KVSGL 250

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   K        +V D+M K PK +L +T L+  ++++ ++ I  ++V D+ 
Sbjct: 251 ITDGDIRRAMEKWQAQFFDHTVGDIMTKQPKTVLPNTKLSEILRIMHKYKIHTVLVTDEE 310

Query: 324 QKAIGIV 330
              +G+V
Sbjct: 311 NHLLGVV 317


>gi|220919291|ref|YP_002494595.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219957145|gb|ACL67529.1| KpsF/GutQ family protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 348

 Score =  309 bits (791), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 182/326 (55%), Gaps = 10/326 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               V      + AE R + ++       L   F  AV  I   KGRVV+TG+GK G + 
Sbjct: 29  TQDLVAYGRTVVEAEARAIGAV------PLDDAFATAVRWILGCKGRVVVTGMGKPGFVA 82

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+++TLASTGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++   
Sbjct: 83  QKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGA 142

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++AIT++  + +A  AD+V+ +    E+CP GLAPT S  + LA+GDA+++ +L +R F
Sbjct: 143 KIVAITADRANRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPF 202

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVV 257
              ++ + HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV
Sbjct: 203 DREEYALFHPGGKLGRGLMKVHELMRGESSNPVVREDAPLAAAVAVMTETPGRPGATSVV 262

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                L GI T+GD+ R            V   M + PK +  D L+  A ++LRQ  I 
Sbjct: 263 AADGTLVGIFTDGDLRRLVEHGETDFARPVSSAMCRGPKTVRPDALVVDAARVLRQARID 322

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VVD+  + +G++   DLL   I+
Sbjct: 323 QVPVVDEAGRPVGLLDVQDLLAAKIL 348


>gi|85859856|ref|YP_462058.1| arabinose-5-phosphate isomerase [Syntrophus aciditrophicus SB]
 gi|85722947|gb|ABC77890.1| arabinose-5-phosphate isomerase [Syntrophus aciditrophicus SB]
          Length = 336

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 126/331 (38%), Positives = 195/331 (58%), Gaps = 7/331 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
             +  ++ K+ T+  A   +  E   +  L     G L   F  AV+ I    GRV++TG
Sbjct: 1   MTRQQNMQKDQTIVRAEEVLRIEAESILQLI----GRLDGNFSRAVDIIYRSPGRVIVTG 56

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           IGKSG IG K+ +T+ STGT + F+H  E  HGDLG++T+DD+++ +S SG ++E+  ++
Sbjct: 57  IGKSGLIGKKIVATMTSTGTQALFLHPVEGLHGDLGIVTKDDVLLAISNSGETEEVNRLI 116

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              ++   PLI+ T    S +A  +D V+ +  E E+CP GLAPT+S+   LA+GDALA+
Sbjct: 117 SSVQKIGTPLISFTGNPSSTMARASDAVIDVGVEREACPFGLAPTSSSTATLAMGDALAV 176

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           AL++   FSE DFY  HPGG LG  L     DVM SG  +P +  G   IDAI++L EK 
Sbjct: 177 ALIDKHKFSEKDFYKFHPGGSLGQRLRAKVRDVMISGSDMPQIYAGTSAIDAISVLDEKN 236

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            G + V DE  +L+GI+T+GD+ R   K  D++   ++D+M ++PK I +   L   ++ 
Sbjct: 237 KGFILVTDELNRLQGILTDGDVRRLVRKGLDISEKRIDDIMTRSPKSIQDSWSLAQTIEF 296

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +++  I+ L VV+   +  G +H  D+L  G
Sbjct: 297 MQKDEITALAVVNGGNQLQGYIHLHDILGRG 327


>gi|307625723|gb|ADN70027.1| D-arabinose 5-phosphate isomerase [Escherichia coli UM146]
          Length = 321

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 181/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLA+TGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLANTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|308189303|ref|YP_003933433.1| sugar phosphate isomerase [Pantoea vagans C9-1]
 gi|308055918|gb|ADO08087.1| Predicted sugar phosphate isomerase [Pantoea vagans C9-1]
          Length = 320

 Score =  308 bits (790), Expect = 6e-82,   Method: Composition-based stats.
 Identities = 125/324 (38%), Positives = 184/324 (56%), Gaps = 6/324 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK   +  A  +I  E R      SSL   L   F  A ++I A KG+V+++GIGKSGHI
Sbjct: 1   MKEQVLCAARETIQTELRE----ASSLTERLDDDFFHACQRILACKGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+T+ASTGTP+F+VHAAEA HGDLGMI   D++I++S+SG + E + ++   +   
Sbjct: 57  GRKIAATMASTGTPAFYVHAAEALHGDLGMIAEGDVLILISYSGHAAEFRRMIPLLKALP 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA T    S +   AD  + +  + E+CP GLAPT+SA+  L +GDALAIA++ + N
Sbjct: 117 VDVIAFTGNPASPLGEAADHCIDVHVKQEACPLGLAPTSSAVNTLIMGDALAIAVMRAHN 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE D+   HP G LG  L     D+M +   IP+V+    + DA+  L+    G VAV 
Sbjct: 177 FSEEDYARTHPAGSLGMRLLCHVKDIMQTDARIPVVEPTSTVYDALFELTRTGLGMVAVT 236

Query: 258 DEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D  +++ G+ T+GD+ R   K    +  V+D M  +   +    L   A  LL++  IS 
Sbjct: 237 DGDRRMLGVFTDGDLRRWLLKGGALSSPVQDAMTSSGFALSATQLAAEAKALLQELRISS 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             V+      IG +  LD+   GI
Sbjct: 297 APVISQDGYVIGAISSLDISEAGI 320


>gi|238792128|ref|ZP_04635764.1| hypothetical protein yinte0001_10340 [Yersinia intermedia ATCC
           29909]
 gi|238728759|gb|EEQ20277.1| hypothetical protein yinte0001_10340 [Yersinia intermedia ATCC
           29909]
          Length = 299

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 124/295 (42%), Positives = 173/295 (58%), Gaps = 2/295 (0%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            L   F  A E + A  G+ V++GIGKSGHIG K+A++LASTGTPSFFVH AEA HGDLG
Sbjct: 4   RLDDNFVRACELLLACTGKAVVSGIGKSGHIGKKIAASLASTGTPSFFVHPAEALHGDLG 63

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 64  MIGPQDVVIFISYSGRAKELDLILPLLADSKIPVIAITGGKESPLALGAACVLDISVEHE 123

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F   DF   HPGG LG  L      +M +
Sbjct: 124 ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFGAEDFARSHPGGSLGARLLNRVHHLMRT 183

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSV 285
           GDS+P+V     +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K       +
Sbjct: 184 GDSLPMVHESDSVMEAMLELSRTGLGLVAVCDPEQRVVGVFTDGDLRRWLVKGGTLQQPL 243

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              + +    + E      A++ L QH++S   VV+   K +G ++  DL + G+
Sbjct: 244 GSAITRPGYRLPEQWRAGEALEALHQHHLSAAPVVNLDGKLVGAINLHDLHQAGV 298


>gi|108763284|ref|YP_634060.1| GutQ protein [Myxococcus xanthus DK 1622]
 gi|108467164|gb|ABF92349.1| GutQ protein [Myxococcus xanthus DK 1622]
          Length = 352

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 126/337 (37%), Positives = 192/337 (56%), Gaps = 8/337 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +            +T+  A   + AE R +      +   L   F  AV+ ++  +G+V+
Sbjct: 20  RPAQPPAVLPDAEATLAYARSVLEAEARAIL----GVTERLGDDFLRAVQLVRDCRGQVI 75

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TG+GK+GHIG KL++TLASTG  S ++H AEA HGDLG + R D+I+ LS SGS++EL 
Sbjct: 76  VTGMGKAGHIGQKLSATLASTGIRSVYLHPAEAVHGDLGRVGRGDVILALSNSGSTEELI 135

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L   +R   P+IA+T + KS +   AD+VL +    E+CP GL PT S     AIGDA
Sbjct: 136 RLLPSFKRMETPVIALTGDAKSPLGRGADVVLDIGAIAEACPMGLVPTASTAALHAIGDA 195

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LA+ +L SR F   D+ +LHPGGKLG       ++M +G++ PLV+   PL   + ++++
Sbjct: 196 LAMTVLRSRPFGTEDYALLHPGGKLGRSVQRVFELMRTGNANPLVRDTSPLSAVVGVMTK 255

Query: 249 --KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTV 304
              R G   VVD+  KL GI T+GD+ R     L   +  V ++M KNP+ +  +TL+  
Sbjct: 256 TPGRPGAACVVDKAGKLVGIFTDGDLRRRVEAGLTDFTVPVRELMGKNPRCVTPETLVLA 315

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A   +R+  +  L VVD   +A+G++   DLL    +
Sbjct: 316 AATQMRELRVDQLPVVDVEGRAVGLLDVQDLLAAKFV 352


>gi|303249749|ref|ZP_07335953.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|307251937|ref|ZP_07533838.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
 gi|302651316|gb|EFL81468.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 6 str. Femo]
 gi|306860629|gb|EFM92641.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 6
           str. Femo]
          Length = 311

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 113/311 (36%), Positives = 187/311 (60%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +S L   L G     F+ AVE +   +GRVV+ GIGKSG +G K
Sbjct: 2   NYLASANETLSLYAQAISQLNQRLDG----AFNQAVEMVLNCEGRVVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D++I++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKPIDVVILISNSGETDDVIKLLPSLKSFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HA+++L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+ +R+F  
Sbjct: 118 IAMTGSPNSTLAQHANLILNIGVEREACPNNLAPTTSTLVTMALGDALAIALINARDFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +     +     +P+ +        +++++E R G   ++ +G+
Sbjct: 178 EDFARFHPGGSLGRKLLNRVKDVMQTK-LPIAQPNADFSTILSVMNEGRMGVALIM-QGE 235

Query: 262 KLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L+GIIT+GDI R   +   D    + E +M K+PK + ++T L  A +++++ +I  L+
Sbjct: 236 QLQGIITDGDIRRTLAQFGTDSLAKTAEQIMSKHPKTVSDNTYLAKAEEMMKELHIHSLI 295

Query: 319 VVDDCQKAIGI 329
            ++D  K  GI
Sbjct: 296 ALNDEGKVSGI 306


>gi|258544359|ref|ZP_05704593.1| arabinose 5-phosphate isomerase [Cardiobacterium hominis ATCC
           15826]
 gi|258520439|gb|EEV89298.1| arabinose 5-phosphate isomerase [Cardiobacterium hominis ATCC
           15826]
          Length = 321

 Score =  308 bits (790), Expect = 7e-82,   Method: Composition-based stats.
 Identities = 133/326 (40%), Positives = 187/326 (57%), Gaps = 10/326 (3%)

Query: 19  MKNST-VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MKN T +  A   +  E   + +        L   F  A E + A +G V++TG+GKSGH
Sbjct: 1   MKNDTRLAHARDVLRLEADAVRA----QIDHLGAPFLAACELLLATRGHVIVTGLGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTP+FFVHAAEA HGDLGMIT DD I+ +S+SG S E+  +L   R  
Sbjct: 57  IGEKIAATLASTGTPAFFVHAAEAGHGDLGMITADDTILAISYSGESQEILMMLPIVRAL 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +  IA+T   +S +A  AD+ L +    E+CP GLAPTTS    LA+GDALAI L+++R
Sbjct: 117 GVKTIALTGRPQSSMAQQADLHLPVVVAKEACPLGLAPTTSTTATLALGDALAITLMQAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+E DF   HP G+LG   +    DVM    ++P V     +  A+  +++K  G   V
Sbjct: 177 QFNEQDFARSHPYGRLGRRLMTKVGDVMRRDAAVPQVARDASVQTALFQITDKGLGVTLV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D G +L GI T+GD+ R   K  D     + +VM + P+      L   A+Q +   +I
Sbjct: 237 SD-GDRLLGIFTDGDLRRALEKYPDALQRPIAEVMTRAPQTTAPTVLAAEALQHMEARHI 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L V+D  ++  GI+H  DLLR G+
Sbjct: 296 TALPVLD-GERIAGIIHIHDLLRAGV 320


>gi|224584616|ref|YP_002638414.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|224469143|gb|ACN46973.1| putative phosphosugar-binding protein [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
          Length = 308

 Score =  308 bits (789), Expect = 8e-82,   Method: Composition-based stats.
 Identities = 122/302 (40%), Positives = 173/302 (57%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   ++++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESREVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L IGDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMIGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R      
Sbjct: 187 HHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|223934763|ref|ZP_03626683.1| KpsF/GutQ family protein [bacterium Ellin514]
 gi|223896718|gb|EEF63159.1| KpsF/GutQ family protein [bacterium Ellin514]
          Length = 335

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 116/317 (36%), Positives = 177/317 (55%), Gaps = 9/317 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A ++++ E   L        G L   F  A + I +  G+VV++G+GKSG IG KL +T
Sbjct: 18  WATKTMLVEAEALKDAA----GRLGHGFLKAADLILSHPGKVVVSGLGKSGIIGKKLVAT 73

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L STGTP+ F+H AEA HGDLG+ +  D  I++S SG++ EL  ++   R+F  PLI I 
Sbjct: 74  LCSTGTPAVFLHPAEALHGDLGVYSLGDPTILISKSGTTAELLRLVPMLRQFESPLIGIF 133

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
               S +A   D VL      E+    LAPT+S I+ +A+GDALA AL+++RNF   DF 
Sbjct: 134 GNTSSHLARRMDAVLDASVRCEADACNLAPTSSTIVAMALGDALASALMQARNFGPEDFA 193

Query: 206 VLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             H GG+LG    +   DV+H  D++  V +   + D +  +++  FG   V+     L+
Sbjct: 194 RFHAGGQLGRNLLMKVRDVLHPLDAVACVGVDATVKDVVIGMTQYPFGAACVIRFDGVLE 253

Query: 265 GIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NISVLMVV 320
           G+IT+GD+ R    H D+ +L V ++M  +P  I  +  L  A+QL+ +    ISVL VV
Sbjct: 254 GLITDGDLRRALQEHDDIRSLPVTEIMTASPVAIRPEARLKEALQLMEERELQISVLPVV 313

Query: 321 DDCQKAIGIVHFLDLLR 337
           D     +G++   D+ +
Sbjct: 314 DAQGLCLGLIRIHDIYQ 330


>gi|241116892|ref|XP_002401659.1| conserved hypothetical protein [Ixodes scapularis]
 gi|215493203|gb|EEC02844.1| conserved hypothetical protein [Ixodes scapularis]
          Length = 282

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 119/283 (42%), Positives = 181/283 (63%), Gaps = 2/283 (0%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           E + + KGRV++TGIGKSG+I  K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+
Sbjct: 1   EFLLSFKGRVILTGIGKSGYIAKKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIM 60

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           LS SG + EL  I+ Y +  SI + A+T    S +A  +D +L +P+ PE+   G APT 
Sbjct: 61  LSNSGETKELFNIIEYCKNSSIKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIG-APTI 119

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
           S+++ L++GDAL   + E R F+++DF + HPGG +G       ++M SGD IPLV    
Sbjct: 120 SSLIMLSLGDALMTVIHEKRGFTKDDFKIYHPGGTIGANLTKVKNLMRSGDEIPLVYEDT 179

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
              + I ++++KR GC  V D+ Q L GIIT+GD+ R+ +  +       +M KNP  I 
Sbjct: 180 SFAETIIVMNKKRLGCTLVTDKNQNLVGIITDGDLRRHINDQIYLKIASSIMTKNPIHIS 239

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +     A+ L++  NI+ + +VD+    IGI+H  DLLR G+
Sbjct: 240 SEIFAKEALNLMKAKNITNIPIVDN-NVIIGIIHIHDLLRIGV 281


>gi|197124568|ref|YP_002136519.1| KpsF/GutQ family protein [Anaeromyxobacter sp. K]
 gi|196174417|gb|ACG75390.1| KpsF/GutQ family protein [Anaeromyxobacter sp. K]
          Length = 348

 Score =  308 bits (789), Expect = 9e-82,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 182/326 (55%), Gaps = 10/326 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
               V      + AE R + ++       L   F  AV  I   KGRVV+TG+GK G + 
Sbjct: 29  TQDLVAYGRTVVEAEARAIGAV------PLDDAFATAVRWILGCKGRVVVTGMGKPGFVA 82

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+++TLASTGTPS +VH AEA+HGDLG I RDDL+  LS SG ++E+  +L   ++   
Sbjct: 83  QKISATLASTGTPSLYVHPAEAAHGDLGRIARDDLVFALSNSGETEEILRLLPSLKKIGA 142

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++AIT++  + +A  AD+V+ +    E+CP GLAPT S  + LA+GDA+++ +L +R F
Sbjct: 143 KIVAITADRANRLARAADLVIAIGNVEEACPMGLAPTASTAVLLAVGDAISMTVLANRPF 202

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVV 257
              ++ + HPGGKLG   +   ++M    S P+V+   PL  A+ +++E   R G  +VV
Sbjct: 203 DREEYALFHPGGKLGRGLMKVHELMRGEASNPVVREDAPLAAAVAVMTETPGRPGATSVV 262

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                L GI T+GD+ R            V   M + PK +  D L+  A ++LRQ  I 
Sbjct: 263 AADGTLVGIFTDGDLRRLVEHGEADFSRPVGSAMCRGPKTVRPDALVVDAARVLRQARID 322

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VVD+  + +G++   DLL   I+
Sbjct: 323 QVPVVDEAGRPVGLLDVQDLLAAKIL 348


>gi|16421383|gb|AAL21718.1| putative polysialic acid capsule expression protein [Salmonella
           enterica subsp. enterica serovar Typhimurium str. LT2]
          Length = 308

 Score =  308 bits (789), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 122/302 (40%), Positives = 173/302 (57%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R      
Sbjct: 187 HHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|282881292|ref|ZP_06289976.1| sugar isomerase, KpsF/GutQ family [Prevotella timonensis CRIS
           5C-B1]
 gi|281304837|gb|EFA96913.1| sugar isomerase, KpsF/GutQ family [Prevotella timonensis CRIS
           5C-B1]
          Length = 324

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 117/323 (36%), Positives = 190/323 (58%), Gaps = 9/323 (2%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +    ++L+K +    A + I  E + L  L      +L   F  AVE +   KG++++T
Sbjct: 1   MDENTNNLLKQTK-DFAAQCIKDEAQALLDLI----PQLDEHFEKAVELMFNCKGKIIVT 55

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+K+A+TL+STGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   
Sbjct: 56  GVGKSGHIGAKIAATLSSTGTPAFFINPLDVYHGDLGVMTPDDVVLALSNSGQTDELLRF 115

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L       +P+++I+    S++A ++   +    + E+CP  LAPT+S    LA+GDALA
Sbjct: 116 LPMVLHMKVPVVSISRNAHSLLAKYSTTHILCSVKKEACPLNLAPTSSTTAALAMGDALA 175

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           IAL++ R F  NDF   HPGG+LG   +  +  +   D++P++     L DAI  +S+ +
Sbjct: 176 IALMKVRKFKPNDFAQFHPGGELGKRLLTTAADVMRSDNLPIIPKEMHLGDAIIHVSKGK 235

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G + V  E +++ G+IT+GDI R   K        +V D+M  NPK +   T +T   +
Sbjct: 236 LG-LGVSLENEQVVGLITDGDIRRAMEKWQAQFFDKTVSDIMTTNPKTVAPSTKITEIQR 294

Query: 308 LLRQHNISVLMVVDDCQKAIGIV 330
           ++ Q+ I  ++VVD+    +GIV
Sbjct: 295 IMHQYKIHTVLVVDEANHLLGIV 317


>gi|282859566|ref|ZP_06268671.1| putative arabinose 5-phosphate isomerase [Prevotella bivia
           JCVIHMP010]
 gi|282587794|gb|EFB92994.1| putative arabinose 5-phosphate isomerase [Prevotella bivia
           JCVIHMP010]
          Length = 324

 Score =  307 bits (788), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 112/307 (36%), Positives = 182/307 (59%), Gaps = 7/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I  E     +L      +L   F  AVE I   KG+V++TG+GKSG+IG+K+A+TL
Sbjct: 15  AAQCIKEETESTLALID----QLDENFDKAVELIYHCKGKVIVTGVGKSGNIGAKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +A HGDLG++T++D+++ LS SG +DEL   +       IP+I +++
Sbjct: 71  SSTGTPAFFVNPLDAYHGDLGVMTKEDIVLALSNSGQTDELLRFVPILLHMDIPIIGMSA 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A ++ + + +  E E+CP  LAPT+S    L +GDALA+AL+  RNF   DF  
Sbjct: 131 NTSSLLAKYSTVHIKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPKDFAQ 190

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG LG   +  +  +   + +P++     L +AI  +S+ + G    +D   ++ G+
Sbjct: 191 FHPGGSLGKRLLTTAQDVMQAEELPIIPKEMNLGEAIIHVSKGKLGLGVSLDTDNRVIGL 250

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   K        +VED+M K PK +L  T ++     ++++ I  ++V DD 
Sbjct: 251 ITDGDIRRAMEKWQAKFFDKTVEDIMTKQPKSVLPTTKISDIQATMQKYKIHTVLVCDDQ 310

Query: 324 QKAIGIV 330
           ++ +GIV
Sbjct: 311 KQLLGIV 317


>gi|332288188|ref|YP_004419040.1| D-arabinose 5-phosphate isomerase [Gallibacterium anatis UMN179]
 gi|330431084|gb|AEC16143.1| D-arabinose 5-phosphate isomerase [Gallibacterium anatis UMN179]
          Length = 311

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 114/299 (38%), Positives = 180/299 (60%), Gaps = 9/299 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A  ++  E++ L+ L    Q +L   F   VE I   +GR+VI GIGKSG +G K
Sbjct: 2   DYLQIAKDTLAIEQQALTRL----QQQLPENFQQIVELILHCQGRLVIGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  IVATFASTGTPSFFLHPTEAFHGDLGMLKPIDVVLLISYSGETDDVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T   +S +A HAD VL +  E E+CP+ LAPTTS ++ +A+GDALA++L+++R+F  
Sbjct: 118 IAMTGNLQSTLAKHADYVLDISVEREACPNNLAPTTSVLVTMALGDALAVSLIKARHFQA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C         ++P+V      +D +T+++E R G   ++ + +
Sbjct: 178 EDFAKFHPGGSLGRRLLCKVRDKMQT-TLPVVHANTLFLDCLTVMNEGRMGVALIM-QDK 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           KL+GIIT+GDI R   +    +     +D M   PK I +++ L  A   +RQ+ I  L
Sbjct: 236 KLQGIITDGDIRRAMSRYGETVLQKQAQDFMTVTPKTINQNSYLGQAEDFMRQNKIHSL 294


>gi|81242225|gb|ABB62935.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 308

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 121/302 (40%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFFRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+I+ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVILFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARFHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|223038375|ref|ZP_03608669.1| sugar isomerase, KpsF/GutQ family [Campylobacter rectus RM3267]
 gi|222880232|gb|EEF15319.1| sugar isomerase, KpsF/GutQ family [Campylobacter rectus RM3267]
          Length = 319

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 120/324 (37%), Positives = 188/324 (58%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + T++ A   +  E   L+     L GE    F  AVE +   KG+VV+TG+GKSGH+G+
Sbjct: 2   SDTIKIAANVLKTEANELTRNAEILDGE----FEKAVEVLYKTKGKVVVTGVGKSGHVGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMI +DD ++ +S+SG S+EL  IL + +RF +P
Sbjct: 58  KIAATLASTGTPSFFMHPTEAMHGDLGMIGKDDTLLAISFSGESEELTKILPHVQRFGVP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++A+  +  S +   +D  + L    E+CP   APT+S  + LA+GDALA+ L+E R F 
Sbjct: 118 IVAMARDKFSTLGKFSDAFVKLDVSKEACPLDAAPTSSTTLTLALGDALAVCLMEKRGFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         +   + +P+V+    L  AI  ++  + G V +VD+ 
Sbjct: 178 KEDFANFHPGGSLGKRLFLKVKDVMRSEKLPIVRWNASLKQAIDTMTHGKLGTVLIVDKD 237

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISV 316
             L  I+++GD+ R   +   DLN  +++      PK + + + L   A+ L+ +H I +
Sbjct: 238 GVLDAILSDGDLRRALMREDFDLNDAAIK-YATLKPKELNDKEMLAIDALALIERHKIQL 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L +V +    +G++H  DL   G+
Sbjct: 297 LAIV-ENGVPVGVLHIHDLANLGL 319


>gi|310779336|ref|YP_003967669.1| KpsF/GutQ family protein [Ilyobacter polytropus DSM 2926]
 gi|309748659|gb|ADO83321.1| KpsF/GutQ family protein [Ilyobacter polytropus DSM 2926]
          Length = 319

 Score =  307 bits (787), Expect = 1e-81,   Method: Composition-based stats.
 Identities = 121/321 (37%), Positives = 181/321 (56%), Gaps = 11/321 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A      E   L  +   +    S Q   AV  I A KG+VVITGIGKSG IG K
Sbjct: 2   EIINYAKEVFDIEIGELKKVRDRI----SDQMEKAVNIILASKGKVVITGIGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T ASTGT S F+++AE  HGDLGMI  +D++I +S SG+SDE+ +I+   ++    +
Sbjct: 58  MAATFASTGTHSVFMNSAEGLHGDLGMIHPEDVVIAISNSGNSDEVLSIIPSIKKIGAKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +   +D +L +  E E+CP+ LAPTTS    L +GDA+A  L++ R+F  
Sbjct: 118 IAMTGNPGSGLGQASDCILDIRVEREACPNNLAPTTSTTATLVMGDAMASVLIKLRDFKP 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F V HPGG LG    +   DVMH G+ + +      + + +  ++ KR G V VVD  
Sbjct: 178 ENFAVYHPGGSLGRRLLMKVEDVMHKGNEVAVCDSRATVDEVLLKMTNKRLGAVCVVD-N 236

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISV 316
            ++ GIITEGDI R   +          D+M K    I +D +   A++L+   ++ ISV
Sbjct: 237 GRMSGIITEGDIRRALQEKNKFFDFYAGDIMTKKFTYINKDKMAIDALELMENRENQISV 296

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V+ + ++ +G+V   DLL+
Sbjct: 297 LPVM-EGEELVGLVRVHDLLK 316



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VEDVM K  +V + D+  T    +  +    +  + VVD+  +  GI+   D+ R 
Sbjct: 195 MKVEDVMHKGNEVAVCDSRATVDEVLLKMTNKRLGAVCVVDN-GRMSGIITEGDIRRA 251


>gi|119897085|ref|YP_932298.1| sugar-phosphate isomerase [Azoarcus sp. BH72]
 gi|119669498|emb|CAL93411.1| sugar-phosphate isomerase [Azoarcus sp. BH72]
          Length = 331

 Score =  307 bits (787), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 127/295 (43%), Positives = 171/295 (57%), Gaps = 3/295 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
              F  AVE I    GRV++TGIGKSGHI  KLA+TLASTGTP++FVHAAEA+HGDLGMI
Sbjct: 37  GDDFERAVELILGRSGRVIVTGIGKSGHIARKLAATLASTGTPAYFVHAAEAAHGDLGMI 96

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T +D++I LS SG+S+EL  I+   +R    LIA+T    S +A  AD+ L      E+C
Sbjct: 97  TPEDVVIALSNSGASEELLMIVPLVKRQGARLIALTGRPDSPLAREADVHLDGAVSEEAC 156

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGD 228
           P  LAPT S    LA+GDALA+ALL++R F  +DF   HPGG LG       SDVM    
Sbjct: 157 PLNLAPTASTTAALALGDALAVALLDARGFGPDDFARSHPGGSLGRRLLTHVSDVMRPAP 216

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVE 286
            +P+V     L +A+  ++    G   V D   +  GI T+GD+ R   K  D+    + 
Sbjct: 217 EVPVVGREAALAEALLAMTRGGMGMTVVADPDGRPLGIFTDGDLRRALEKGIDVRAARIA 276

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           D+M   P+ I  D L   A +++ +  IS L+V+D   K  G +   DL+   +I
Sbjct: 277 DLMTPQPRHISPDALAAEAAEVMERQRISQLLVLDAAGKLAGALTTHDLMLAKVI 331


>gi|323188880|gb|EFZ74165.1| arabinose 5-phosphate isomerase [Escherichia coli RN587/1]
          Length = 321

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 180/325 (55%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASHLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++ A+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMVAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+ + +KG+ T+GD+ R        T  V + M      +   +    A ++L +  I+ 
Sbjct: 237 DDQRLVKGVFTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+  K  G ++  D  + GII
Sbjct: 297 APVVDENGKLTGAINLQDFYQAGII 321


>gi|254037330|ref|ZP_04871407.1| KpsF/GutQ family protein [Escherichia sp. 1_1_43]
 gi|226840436|gb|EEH72438.1| KpsF/GutQ family protein [Escherichia sp. 1_1_43]
          Length = 332

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/323 (37%), Positives = 191/323 (59%), Gaps = 10/323 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A   + +E + L  LE+     +   F  A+  +   +GRV++TG+GK G+I  K+
Sbjct: 12  IITQARNILASEAQSL--LEAI--PTIGESFARAIRLLVDTRGRVIVTGMGKPGYIAHKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSF++H AEA+HGDLGM+T  D+I+ LS SG + E+ A+L   +R  +P+I
Sbjct: 68  SATLASTGTPSFYLHPAEAAHGDLGMVTSSDVILALSNSGETPEILALLPVLKRIGLPII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           ++     S +A H+D+ L+   + ESCP  LAPT S  + L++GDA+A+ L+  R F + 
Sbjct: 128 SLCGNENSTLAKHSDVFLSAAVKQESCPLNLAPTNSTTLSLSLGDAMAVILMNIRKFKKE 187

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L     D+M SGD+   V     ++D +  ++  + G  +V+D   
Sbjct: 188 DFAFYHPGGALGKRLLTTVRDIMKSGDNCCAVDQSTSILDTLFAMTSCKTGAASVMDARG 247

Query: 262 KLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH---NISV 316
           +L GI+T+GDI R    +       V +VM  +P  I ED L+ VA++ + Q+    +SV
Sbjct: 248 ELTGIVTDGDIRRYVMYNNLFLNNPVTEVMTSSPVWIYEDELVEVAIRKMEQNSPSPVSV 307

Query: 317 LMVVDDCQKAIGIVHFLDLLRFG 339
           L V++  +K  GI++  D+L+ G
Sbjct: 308 LPVLNRNRKVTGIINLADMLKSG 330


>gi|157964551|ref|YP_001499375.1| KpsF [Rickettsia massiliae MTU5]
 gi|157844327|gb|ABV84828.1| KpsF [Rickettsia massiliae MTU5]
          Length = 324

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 118/306 (38%), Positives = 188/306 (61%), Gaps = 5/306 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
             N+    A R I +E   L  L +++  +    F+  +E + + KGR+++TGIGKSG+I
Sbjct: 7   DTNNYRIIAKRVISSEASALEKLSANIPED----FNRIIEFLLSFKGRIILTGIGKSGYI 62

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  S
Sbjct: 63  ARKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSS 122

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I + A+T    S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R 
Sbjct: 123 IKIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIG-APTISSLIMLSLGDALMTVIHEKRG 181

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+++DF + HPGG +G       ++M SGD IPLV       + I I+++KR GC  V D
Sbjct: 182 FTKDDFKIYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAETIIIMNKKRLGCTLVTD 241

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           + Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 242 KNQNLMGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIP 301

Query: 319 VVDDCQ 324
           +VD+  
Sbjct: 302 IVDENN 307


>gi|53729231|ref|ZP_00133755.2| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Actinobacillus pleuropneumoniae serovar 1
           str. 4074]
 gi|307257653|ref|ZP_07539412.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
 gi|306863828|gb|EFM95752.1| phosphosugar isomerase [Actinobacillus pleuropneumoniae serovar 10
           str. D13039]
          Length = 311

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/311 (38%), Positives = 189/311 (60%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + + SL + L  E    F+ A+E I + +GR+V+ GIGKSG +G K
Sbjct: 2   NYLASARETLSLYTQAIDSLHNRLSTE----FNQAIEMILSCEGRLVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T  + S +A HADI+L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+++RNF  
Sbjct: 118 IAMTGNSHSTLAQHADIILNIGVEKEACPNNLAPTTSTLVTMALGDALAIALIKARNFQA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C    +    S+P+V       + + I++E R G   V+ E  
Sbjct: 178 MDFARFHPGGSLGRKLLCTVKDVM-IRSLPIVSPTAIFSECLNIMNEGRIGVALVM-EHD 235

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GIIT+GDI R       +   ++ + +M KNPK ILE T L  A + ++  ++  L+
Sbjct: 236 CLLGIITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLV 295

Query: 319 VVDDCQKAIGI 329
           V+++  + +GI
Sbjct: 296 VMNEENRVVGI 306


>gi|261247974|emb|CBG25807.1| putative phosphosugar binding protein [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|332989710|gb|AEF08693.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 308

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 122/302 (40%), Positives = 173/302 (57%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKLHSPLGRAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R      
Sbjct: 187 HHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVSEAMTPNGITLQAKSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|119505151|ref|ZP_01627227.1| polysialic acid capsule expression protein [marine gamma
           proteobacterium HTCC2080]
 gi|119459133|gb|EAW40232.1| polysialic acid capsule expression protein [marine gamma
           proteobacterium HTCC2080]
          Length = 323

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 131/326 (40%), Positives = 200/326 (61%), Gaps = 8/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   + +    R++  E + ++ L  SL    S  F  A + I   +GRV++TG+GKSGH
Sbjct: 2   LNDEALLTSGRRTLTLEGQAVTKLAESL----SPSFAAACQLILKTQGRVIVTGMGKSGH 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A+TLASTGTP+FFVH  EASHGD+GMIT+ D ++ LS SG++ E+  +L   +R 
Sbjct: 58  IAHKIAATLASTGTPAFFVHPGEASHGDMGMITQRDTVLALSNSGTTPEILTLLPLLKRL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + L+++T   +S +AC +D+ +    + E+CP  LAPT+S    LA+GDALAIALLESR
Sbjct: 118 GVKLVSLTGHAESALACASDVHVDAGVDTEACPLDLAPTSSTTAALAMGDALAIALLESR 177

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+E DF   HPGG LG  L +   D+M  G  IPLV+    L +A+  ++ K  G   +
Sbjct: 178 GFTEEDFAFSHPGGALGKRLLLRVEDLMIKGTDIPLVEPTATLAEALMEITAKGLGMT-I 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V E  +LKGI T+GD+ R   +  D+N++++  +M  + K +    L   AM ++ ++ I
Sbjct: 237 VGENGQLKGIFTDGDLRRALEEQPDINSVAITALMSASVKTLPAGHLAAEAMHIMEKNRI 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
           S L+V D  ++  G++H + LL+ GI
Sbjct: 297 SSLVVTDAQEQIAGVIHLMALLKAGI 322


>gi|81246628|gb|ABB67336.1| conserved hypothetical protein [Shigella boydii Sb227]
          Length = 308

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|257461219|ref|ZP_05626317.1| arabinose 5-phosphate isomerase [Campylobacter gracilis RM3268]
 gi|257441593|gb|EEV16738.1| arabinose 5-phosphate isomerase [Campylobacter gracilis RM3268]
          Length = 320

 Score =  307 bits (786), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 121/323 (37%), Positives = 180/323 (55%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   L      + GE+      AV  I A KG+V++TG+GKSGHIG 
Sbjct: 2   SEILDMAREVLRLEGAELLRHADLIGGEI----ERAVSLILACKGKVIVTGVGKSGHIGV 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFFVH  EA HGDLGMI +DD+++ +S+SG S+EL  IL + +RF + 
Sbjct: 58  KIAATLASTGTPSFFVHPTEALHGDLGMIGKDDMVLAISFSGESEELVRILPHLKRFGVK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+  +  S +    D  ++L    E+CP G APT S  + L +GDALAI L+  R F 
Sbjct: 118 IIAMARDKNSSLGKVCDEFISLSIVKEACPLGAAPTVSTTLTLGLGDALAICLMRQRRFG 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG         +    ++P+      L  AI I++  + G V +V+E 
Sbjct: 178 KEDFANFHPGGSLGKRLFVKVKDVMQSKNLPVANRNASLKQAIDIMTHGKLGTVLLVNEK 237

Query: 261 QKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVL 317
             L+ I+++GD+ R   ++   ++        KNPK++ + + L   A+ L+ Q  I VL
Sbjct: 238 GALEAILSDGDLRRALMREDFDINDGALKYATKNPKILDDKNMLAIDALNLIEQFKIQVL 297

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            VV +     GI+H  DL   G+
Sbjct: 298 PVV-ENGVPAGILHIHDLTSLGL 319


>gi|269792890|ref|YP_003317794.1| KpsF/GutQ family protein [Thermanaerovibrio acidaminovorans DSM
           6589]
 gi|269100525|gb|ACZ19512.1| KpsF/GutQ family protein [Thermanaerovibrio acidaminovorans DSM
           6589]
          Length = 334

 Score =  306 bits (785), Expect = 2e-81,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 183/323 (56%), Gaps = 9/323 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++  L+ I  E R L    S     +  +   A   + +  GRVV+ G+GKSG IG K
Sbjct: 16  ELLEVGLQVIRQEARALEDGAS----RMGLELVRAARMVASCSGRVVVCGLGKSGLIGRK 71

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLAS G P+FF+HAAE SHGDLGM+ RDD+ + LS SG++ E+  ++ + RR   P+
Sbjct: 72  IAATLASLGCPAFFLHAAEGSHGDLGMVCRDDVGLFLSNSGTTREVLEMVPFFRRIGCPV 131

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +   AD+VL      E+ P G+APT+S  +QLA+GDALA  +        
Sbjct: 132 IALTGRRDSPLGLSADVVLDCSVGREADPLGIAPTSSTTLQLAVGDALAGMVTRLLGLRV 191

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HPGG LG   +   + + +  D +P V     + +A+  +++K +G VAV    
Sbjct: 192 EDFALFHPGGALGRRLLLRLEDVMAVGDRVPRVSRDASVKEALFAITDKGYGAVAVEGPS 251

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +L GI T+GD+ R   +         V +VM +NPKV+  D L   A++L+ +  ISV+
Sbjct: 252 GELVGIFTDGDLRRLMEREGVGSLERPVGEVMTRNPKVMGRDKLAAEALKLMEEMEISVV 311

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VVD   +  GIVH  DLL+ G+
Sbjct: 312 LVVDGA-RVEGIVHLHDLLKAGV 333


>gi|268678706|ref|YP_003303137.1| KpsF/GutQ family protein [Sulfurospirillum deleyianum DSM 6946]
 gi|268616737|gb|ACZ11102.1| KpsF/GutQ family protein [Sulfurospirillum deleyianum DSM 6946]
          Length = 321

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 114/318 (35%), Positives = 188/318 (59%), Gaps = 7/318 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A   +  E + L +    +  E+S     A   +  +KG++++TG+GKSG IG+K+A+T
Sbjct: 7   IAREVLELEAQELLNAARCIGEEMSE----ATHLVANLKGKLIVTGVGKSGLIGAKIAAT 62

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           LASTGT SFF+H  EA HGDLGMI ++D ++ +S+SG S+EL  IL + +RF+IPLI + 
Sbjct: 63  LASTGTSSFFLHPTEALHGDLGMIGKEDAVLAISYSGESEELIKILPHIKRFNIPLIGMA 122

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +  ++DI + L  + E+CP   APT+S  + LA+GDALA+ L++ ++F + DF 
Sbjct: 123 RTKESSLGRYSDIFIPLHVKKEACPLDAAPTSSTTLTLALGDALAVCLMKKKDFQKEDFA 182

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
             HPGG LG         +   +++P+V+    L DAI  +SE R G V + D+   L  
Sbjct: 183 SFHPGGSLGKRLFVKVQDLMLKENLPIVQKETKLKDAILKMSEGRLGNVLITDKNNVLLA 242

Query: 266 IITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDT-LLTVAMQLLRQHNISVLMVVDD 322
           ++++GD+ R   +D  ++     +   KNPK + ++T L + A+  + +H I +L + D+
Sbjct: 243 VLSDGDLRRALMRDDFSMDASAYEYASKNPKRLEDETLLASDALAFIEKHKIQLLAITDN 302

Query: 323 CQKAIGIVHFLDLLRFGI 340
                G++H   L+  GI
Sbjct: 303 VGMLKGVLHIHHLVEAGI 320


>gi|126641282|ref|YP_001084266.1| D-arabinose 5-phosphate isomerase [Acinetobacter baumannii ATCC
           17978]
          Length = 274

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 122/273 (44%), Positives = 168/273 (61%), Gaps = 4/273 (1%)

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +GKSGHIG K+A+T ASTGTPSFF+H  EA HGDLGM+ R D++I +S SG SDE+  ++
Sbjct: 1   MGKSGHIGRKMAATFASTGTPSFFMHPGEAGHGDLGMLVRGDVLIAISNSGKSDEIMMLM 60

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +   +PLI I+ ++K  +  +ADI LTL +  E+CP GLAPT+S    L +GDALA+
Sbjct: 61  PLIKHLGVPLITISRDDKGPMPQNADIALTLGESDEACPLGLAPTSSTTATLVLGDALAV 120

Query: 192 ALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           ALLE+R F+ +DF   HP G LG  L +    +MH+GD +P V    P+   +  +S KR
Sbjct: 121 ALLEARGFTADDFARSHPAGALGKRLLLHVKHLMHTGDELPKVSPNTPMNQVLYEISNKR 180

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G   +VDE   L GI T+GD+ R   K       L V +VM K P  I ++     A+Q
Sbjct: 181 LGLTTIVDEQDHLLGIFTDGDLRRLIDKQQGFDVNLPVSEVMTKKPSTISQEARAVEALQ 240

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L Q  IS  +VVDD  K IG++   DL++ G+
Sbjct: 241 QLNQKKISQFVVVDDQNKVIGVISMHDLIQAGV 273


>gi|315608345|ref|ZP_07883334.1| arabinose 5-phosphate isomerase [Prevotella buccae ATCC 33574]
 gi|315249975|gb|EFU29975.1| arabinose 5-phosphate isomerase [Prevotella buccae ATCC 33574]
          Length = 323

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 189/314 (60%), Gaps = 8/314 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +    + +  E + L  L      ++   F  AVE +    G++++TG+GKSG+IG
Sbjct: 8   QKDILNWGKQCLRDEAQALLDLI----PQMDENFSKAVEMMYRCHGKIIVTGVGKSGNIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      ++
Sbjct: 64  AKIAATLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIPMLLHMNV 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I++T   KS++A  ++  L +  + E+CP  LAPT+S    LA+GDALA+AL++ R+F
Sbjct: 124 PIISMTGNEKSLLAKFSNAHLKVWVKKEACPLNLAPTSSTTAALAMGDALAVALMQVRDF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF   HPGG+LG   +  ++ +   D +P++     L +AI  +S+ + G + V  E
Sbjct: 184 KPRDFAQFHPGGELGKRLLTTAEDVMRSDQLPIIPQDMHLGEAIIQVSKGKLG-LGVSLE 242

Query: 260 GQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             K+ G+IT+GDI R   K        +V+++M + PK++L +T +T   ++++QH I  
Sbjct: 243 DNKVAGLITDGDIRRAMEKWQAKFFDHTVDEIMTRTPKLVLPNTKITEIQRIMQQHRIHT 302

Query: 317 LMVVDDCQKAIGIV 330
           ++V D  +  +G+V
Sbjct: 303 VLVTDKERHLLGVV 316


>gi|297581727|ref|ZP_06943649.1| arabinose-5-phosphate isomerase [Vibrio cholerae RC385]
 gi|297534134|gb|EFH72973.1| arabinose-5-phosphate isomerase [Vibrio cholerae RC385]
          Length = 309

 Score =  306 bits (785), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 112/312 (35%), Positives = 166/312 (53%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A   +  E +GL SL   L      QF  AV+ I A  GR +I G+GKSG +G K
Sbjct: 2   SVIERAREVLDIEIQGLRSLSQQLDK----QFEKAVQVILATHGRTIICGMGKSGIVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++LASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + +     L
Sbjct: 58  IAASLASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLKDNGNYL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  A   L +    E+CP  LAPT S    +A+GDAL I L+E R F  
Sbjct: 118 IAMTGNRLSTLAKAAHCHLNIAVPQEACPLQLAPTASTTATIAMGDALTICLMEERKFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +         +++P+V         I ++S  + G   V     
Sbjct: 178 ENFARFHPGGSLGRKLMRRVSDEMVAENLPIVSSTATFKTVIEVISSGKLGLSVVQYSNG 237

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L G+IT+GD+ R+   +      L   D+    P  I  D ++  A +L+ +H +S L+
Sbjct: 238 SL-GVITDGDLRRSMEANGKSAFDLLASDIASVKPFTIRSDAMMQEAFELMDKHKVSCLL 296

Query: 319 VVDDCQKAIGIV 330
           VV +  + +G+V
Sbjct: 297 VV-ERNQFVGLV 307


>gi|296126251|ref|YP_003633503.1| KpsF/GutQ family protein [Brachyspira murdochii DSM 12563]
 gi|296018067|gb|ADG71304.1| KpsF/GutQ family protein [Brachyspira murdochii DSM 12563]
          Length = 321

 Score =  306 bits (784), Expect = 3e-81,   Method: Composition-based stats.
 Identities = 131/324 (40%), Positives = 186/324 (57%), Gaps = 12/324 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++    +++ E   L  L   L       F  AV+++  I+GRV+ +G+GKSGHI  K
Sbjct: 2   NIIERGKTTLLLESENLRDLSDKL----DINFENAVKELFKIRGRVITSGVGKSGHIARK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            A+T ASTGTPSFFV   E  HGD GMIT+DD  I+ S  G S E+  ++ +  R +I  
Sbjct: 58  AAATFASTGTPSFFVDPNECMHGDFGMITKDDYCILYSKGGESREIIELVNWLLRQNISY 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T+E  S +A +A IVL    + E+CP  LAPT S    LA+ DALA AL+E R F  
Sbjct: 118 IAVTNEIDSTLAKNAKIVLLTYVKEEACPLKLAPTVSTTASLALSDALATALMEIRGFRA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF V HPGG LG        +MH+ +++P+V I   L DA+  + E + G    VD   
Sbjct: 178 EDFAVFHPGGSLGRQLAKVKSIMHT-ENLPIVSINATLQDALFKIIECKLGVAIAVDNNN 236

Query: 262 KLKGIITEGDIFRNFHKD-----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            LKGII +GD+ R   KD     + +  V+D+M  +PKVI EDTL+  A+ ++    I+ 
Sbjct: 237 ILKGIIVDGDLKRLLVKDNDIQNILSKKVKDIMNTSPKVIYEDTLIGEALHMME-GKITN 295

Query: 317 LMVVDDCQ-KAIGIVHFLDLLRFG 339
           L+V+D    K IG+VH  D+L+  
Sbjct: 296 LVVLDKENAKPIGVVHIHDILKIK 319


>gi|288927559|ref|ZP_06421406.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 317 str.
           F0108]
 gi|288330393|gb|EFC68977.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 317 str.
           F0108]
          Length = 328

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 115/313 (36%), Positives = 186/313 (59%), Gaps = 8/313 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N+    A + +  E + L  L      +L   F  AVE +   KG+V++TG+GKSG+IG+
Sbjct: 14  NNVRAYATQCLKDEAQALLDLI----PQLDHHFDKAVEMMFNCKGKVIVTGVGKSGNIGA 69

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +       +P
Sbjct: 70  KIAATLSSTGTPAFFINPLDVYHGDLGVMTADDVVLALSNSGQTDELLRFIPAILHRDVP 129

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI ++    S++A ++   +T+  + E+CP  LAPT+S    LA+GDALA+AL++ RNF 
Sbjct: 130 LIGMSRNPHSLLAKYSVAHITVKVDKEACPLNLAPTSSTTAALAMGDALAVALMQVRNFK 189

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG+LG   +  +  +   D +P++     L DAI  +S+ + G    V E 
Sbjct: 190 PTDFARFHPGGELGKRLLTTAADVMRVDDLPVIPRQMHLGDAIIQVSKGKLGLGVSV-ED 248

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            K+ G+IT+GDI R   K        +V D+M  NPK++L  T +    Q+++++ I  +
Sbjct: 249 GKIVGLITDGDIRRAMEKWQAEFFNKTVNDIMTTNPKIVLPTTKIADIQQIMQKYKIHTV 308

Query: 318 MVVDDCQKAIGIV 330
           +V D+ ++ +GIV
Sbjct: 309 LVADENERLVGIV 321


>gi|209920147|ref|YP_002294231.1| D-arabinose 5-phosphate isomerase [Escherichia coli SE11]
 gi|209913406|dbj|BAG78480.1| conserved hypothetical protein [Escherichia coli SE11]
          Length = 308

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALAASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|213618599|ref|ZP_03372425.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
          Length = 293

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 119/284 (41%), Positives = 166/284 (58%), Gaps = 7/284 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            GI T+GD+ R F    D+  L + +VM      +    L   A
Sbjct: 250 DGIFTDGDLRRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDA 293


>gi|307565622|ref|ZP_07628100.1| putative arabinose 5-phosphate isomerase [Prevotella amnii CRIS
           21A-A]
 gi|307345654|gb|EFN91013.1| putative arabinose 5-phosphate isomerase [Prevotella amnii CRIS
           21A-A]
          Length = 324

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 113/307 (36%), Positives = 184/307 (59%), Gaps = 7/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++ I  E     +L      +L   F  AV+ I   KG+V++TG+GKSG+IG+K+A+TL
Sbjct: 15  AIQCIKEEAEATLALI----NQLDDNFDKAVKLIYDCKGKVIVTGVGKSGNIGAKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +A HGDLG++T+DD+++ LS SG +DEL   +    + ++P+I I++
Sbjct: 71  SSTGTPAFFVNPLDAYHGDLGVMTKDDVVLALSNSGQTDELLRFIPILLQMTVPIIGISA 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A ++ + + +  E E+CP  LAPT+S    L +GDALA+AL+  RNF   DF  
Sbjct: 131 NTDSLLAKYSTVHIKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPKDFAQ 190

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG LG   +  +  +   +S+P++     L DAI  +S+ + G    +D+  K+ G+
Sbjct: 191 FHPGGSLGKRLLTTAQDVMQAESLPIIPKEMHLGDAIIHVSKGKLGLGVSLDKDNKVIGL 250

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +VED+M K PK +L  T +      ++++ I  ++V D  
Sbjct: 251 ITDGDIRRAMEQWQAEFFDKTVEDIMTKEPKSVLPITKIADIQATMQKYKIHTVLVCDAN 310

Query: 324 QKAIGIV 330
           +  +GIV
Sbjct: 311 KHLLGIV 317


>gi|30042323|gb|AAP18048.1| hypothetical protein S2922 [Shigella flexneri 2a str. 2457T]
 gi|56383718|gb|AAN44222.2| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
          Length = 308

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|313157307|gb|EFR56732.1| sugar isomerase, KpsF/GutQ family [Alistipes sp. HGB5]
          Length = 321

 Score =  306 bits (783), Expect = 4e-81,   Method: Composition-based stats.
 Identities = 113/319 (35%), Positives = 185/319 (57%), Gaps = 8/319 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   +  A ++I  E   L  ++ +L       F  AVE I + +G+ ++TG+GKSG +G
Sbjct: 6   KAQILDLARKAINTELLALKRMKETL----GDNFADAVEMILSGQGKCIVTGMGKSGLVG 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFF+H  EA HGDLGMI+++D+++ LS+SG +DE+  I+ +      
Sbjct: 62  RKIAATLASTGTPSFFLHPGEAFHGDLGMISKEDVVLALSYSGETDEILKIVPFIHSNGN 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LI++T   +S +A ++D+ L +  E E+C   LAPTTS   Q+A+GDALA++L++ R F
Sbjct: 122 KLISMTGNPESALAKNSDVHLDVSVEEEACILHLAPTTSTTAQIAMGDALAVSLMQMRGF 181

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  DF  LHPGG LG   +     +     +P+V   C   D I  +S+   G + + D 
Sbjct: 182 TSVDFARLHPGGSLGRRLLMTVGNVMRSHDLPVVAPDCSATDMIHAISKGGLGLIIICD- 240

Query: 260 GQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           G +++GI+T+GD+         +   +   D+   NPK I  D  L  A +++ ++ ++ 
Sbjct: 241 GDRIEGIVTDGDVRRAMERRRAEFFNIKAADIATPNPKTISADRKLIEAEKMMTRNKVTS 300

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L+V D+  K  G++   D+
Sbjct: 301 LLVTDEAGKLQGVIQIYDI 319


>gi|153831116|ref|ZP_01983783.1| sugar isomerase, KpsF/GutQ family [Vibrio cholerae 623-39]
 gi|148873406|gb|EDL71541.1| sugar isomerase, KpsF/GutQ family [Vibrio cholerae 623-39]
          Length = 309

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 113/312 (36%), Positives = 166/312 (53%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A   +  E +GL SL   L      QF  AV+ I A  GR +I G+GKSG +G K
Sbjct: 2   SVIKRAREVLDIEIQGLRSLSQQLDK----QFEKAVQVILATHGRTIICGMGKSGIVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++LASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + +     L
Sbjct: 58  IAASLASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLKDNGNYL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A  A   L +    E+CP  LAPT S    +A+GDAL I L+E R F  
Sbjct: 118 IAMTGNRLSTLAKAAYCHLNIAVPQEACPLQLAPTASTTATIAMGDALTICLMEERKFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +         +++P+V         I ++S  + G   V     
Sbjct: 178 ENFARFHPGGSLGRKLLRRVSDEMVVENLPIVSSTATFKTVIEVISSGKLGLSVVQYSNG 237

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L G+IT+GD+ R+   +      L   D+    P  I  D ++  A +L+ +H +S L+
Sbjct: 238 SL-GVITDGDLRRSMEANGKSAFDLLASDIASVKPLTIRSDAMMQEAFELMDKHKVSCLL 296

Query: 319 VVDDCQKAIGIV 330
           VV +  + +GIV
Sbjct: 297 VV-ERNQFVGIV 307


>gi|328684725|gb|AEB33793.1| putative sugar phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 10]
          Length = 311

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 119/311 (38%), Positives = 188/311 (60%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + + SL + L  E    F+ A+E I + +GR+V+ GIGKSG +G K
Sbjct: 2   NYLASARETLSLYTQAIDSLHNRLSTE----FNQAIEMILSCEGRLVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T  + S +A HADI+L +  E E+CP+ LAPTTS ++ +A+GDALAIAL+++RNF  
Sbjct: 118 IAMTGNSHSTLAQHADIILNIGVEKEACPNNLAPTTSTLVTMALGDALAIALIKARNFQA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C    +    S+ +V       + + I++E R G   V+ E  
Sbjct: 178 MDFARFHPGGSLGRKLLCTVKDVM-IRSLXIVSPTAIFSECLNIMNEGRIGVALVM-EHD 235

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GIIT+GDI R       +   ++ + +M KNPK ILE T L  A + ++  ++  L+
Sbjct: 236 CLLGIITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLV 295

Query: 319 VVDDCQKAIGI 329
           V+++  + +GI
Sbjct: 296 VMNEENRVVGI 306


>gi|224437070|ref|ZP_03658051.1| hypothetical protein HcinC1_03840 [Helicobacter cinaedi CCUG 18818]
 gi|313143543|ref|ZP_07805736.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
 gi|313128574|gb|EFR46191.1| conserved hypothetical protein [Helicobacter cinaedi CCUG 18818]
          Length = 323

 Score =  306 bits (783), Expect = 5e-81,   Method: Composition-based stats.
 Identities = 106/319 (33%), Positives = 178/319 (55%), Gaps = 7/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   +  E + L      + G    +    VEKI   +G++V+ G+GKSG IG K+++
Sbjct: 8   EIAKEVLEIESQALLEAIKRING---AELEAIVEKIFHSRGKLVVCGVGKSGLIGVKISA 64

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTPS F+H  EA HGDLGM+ +DD+++ +S+SG S+EL +I+ + +RF   +I +
Sbjct: 65  TLSSTGTPSVFLHPTEALHGDLGMLQKDDILLAISYSGKSEELLSIIPHIKRFGNTIITM 124

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + +  S ++   D  L +  + E+CP  +APT+S  + LA+GD LA+ L++ R F   +F
Sbjct: 125 SRDKLSPLSALGDYFLDISIKREACPLNIAPTSSTTLTLALGDVLAVCLMKRRAFKAENF 184

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +     +P++    PL  AI I+S+KR G   ++ +   + 
Sbjct: 185 ASFHPGGALGKQLFVKLKDLMQTQDLPIIPPEMPLSQAIIIMSQKRLGNA-IIAKDNVIW 243

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVD 321
           GI+++GD+ R   K   +L   V     +NPKV    D L   A++++  + I +L++ D
Sbjct: 244 GILSDGDLRRAMMKQDFSLESQVGAYATQNPKVCDTPDILAYDALKMMEDNKIQLLVITD 303

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             +   G +H   L+  G+
Sbjct: 304 KHRHIQGAIHLHTLISAGL 322


>gi|288926072|ref|ZP_06420000.1| arabinose 5-phosphate isomerase [Prevotella buccae D17]
 gi|288337112|gb|EFC75470.1| arabinose 5-phosphate isomerase [Prevotella buccae D17]
          Length = 323

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 109/314 (34%), Positives = 189/314 (60%), Gaps = 8/314 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +    + +  E + L  L      ++   F  AVE +    G++++TG+GKSG+IG
Sbjct: 8   QKDILNWGKQCLRDEAQALLDLI----PQMDENFSKAVEMMYRCHGKIIVTGVGKSGNIG 63

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      ++
Sbjct: 64  AKIAATLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIPMLLHMNV 123

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I++T   KS++A  ++  L +  + E+CP  LAPT+S    LA+GDALA+AL++ R+F
Sbjct: 124 PIISMTGNEKSLLAKFSNAHLKVWVKKEACPLNLAPTSSTTAALAMGDALAVALMQVRDF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              DF   HPGG+LG   +  ++ +   D +P++     L +AI  +S+ + G + V  E
Sbjct: 184 KPRDFAQFHPGGELGKRLLTTAEDVMRSDQLPIIPQDMHLGEAIIQVSKGKLG-LGVSLE 242

Query: 260 GQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             K+ G+IT+GDI R   K        +V+++M + PK++L +T +T   ++++QH I  
Sbjct: 243 DDKVAGLITDGDIRRAMEKWQAKFFDHTVDEIMTRTPKLVLPNTKITEIQRIMQQHRIHT 302

Query: 317 LMVVDDCQKAIGIV 330
           ++V D  +  +G+V
Sbjct: 303 VLVTDKERHLLGVV 316


>gi|238752460|ref|ZP_04613936.1| hypothetical protein yrohd0001_22320 [Yersinia rohdei ATCC 43380]
 gi|238709309|gb|EEQ01551.1| hypothetical protein yrohd0001_22320 [Yersinia rohdei ATCC 43380]
          Length = 290

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 124/288 (43%), Positives = 174/288 (60%), Gaps = 2/288 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            A E + A  G+ V++GIGKSGHIG K+AS+LASTGTP+FFVH AEA HGDLGMI + D+
Sbjct: 2   RACELLLACTGKAVVSGIGKSGHIGKKIASSLASTGTPAFFVHPAEALHGDLGMIGQQDV 61

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E+CP GLA
Sbjct: 62  LIFISYSGRAKELDMILPLLADSHIPVIAITGSKESPLAQGAACVLDISVEHEACPMGLA 121

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLV 233
           PT+SA+  L +GDALA+AL+  R F+ +DF   HPGG LG  L      +M +G+ +P+V
Sbjct: 122 PTSSAVNTLMMGDALAMALMRHRGFNADDFARSHPGGSLGARLLNRVHHLMRTGERLPVV 181

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    +++A+  LS    G VAV D  Q++ G+ T+GD+ R   K        +  I  P
Sbjct: 182 KESDTVMEAMLELSRTGLGLVAVCDPQQRVVGVFTDGDLRRWLVKGGTLQQPLEPAITRP 241

Query: 294 KVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              L +      A++ L QH+IS   VV+   K +G ++  DL + G+
Sbjct: 242 GYRLPEQWRAGEALEALHQHHISAAPVVNLDGKLVGAINLHDLHQAGV 289


>gi|332876798|ref|ZP_08444556.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 329
           str. F0087]
 gi|332685357|gb|EGJ58196.1| arabinose 5-phosphate isomerase [Capnocytophaga sp. oral taxon 329
           str. F0087]
          Length = 316

 Score =  305 bits (782), Expect = 6e-81,   Method: Composition-based stats.
 Identities = 111/309 (35%), Positives = 176/309 (56%), Gaps = 8/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A++    E + +  L      +L   F  AV+ +    G+V+ITG+GKSGHIG+K+A+
Sbjct: 6   DIAVKCFRDEAQAILDLI----PQLDEHFDAAVDLMLRCTGKVIITGVGKSGHIGAKMAA 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTP+FF++  +  HGDLG++T DD++I +S SG +DEL   + Y     IPLI I
Sbjct: 62  TLSSTGTPAFFINPLDVFHGDLGVMTPDDVVIAISNSGQTDELLRFIPYLLEHHIPLIGI 121

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +    S++A ++   L +    E+CP  LAPT+S    LA+GDALA AL+E R+F   DF
Sbjct: 122 SGNPDSLLAKYSTCHLVVKVSHEACPLNLAPTSSTTATLAMGDALACALIEMRHFQAKDF 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +  +  +   + +P++  G  L +AI  +S+ + G + V     K+ 
Sbjct: 182 AQFHPGGTLGKRLLTTAHDVMRSNDLPVIPPGMKLGEAIIHVSKGKLG-LCVAQVDGKVV 240

Query: 265 GIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GD+ R           + VE VM + PK +  DT +     ++  + I  ++VVD
Sbjct: 241 GLITDGDVRRAMESLQDKFFNVPVEQVMTRTPKCVSPDTKIAKIQDIMHNNKIHTVLVVD 300

Query: 322 DCQKAIGIV 330
           + +  +G+V
Sbjct: 301 EDRHLLGVV 309


>gi|167618855|ref|ZP_02387486.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis Bt4]
 gi|257138078|ref|ZP_05586340.1| carbohydrate isomerase KpsF/GutQ family protein [Burkholderia
           thailandensis E264]
          Length = 311

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + +  A +    E R L+ L + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNDYNYLDSARQVFDIESRALAGLSARV----DESFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTPADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   +   +P V      ID + +++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMAAGDLPFVDERAQAIDVLQVMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GIIT+GD+ R      +TL      D+M K+P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIITDGDVRRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMMETRRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|882600|gb|AAA69217.1| alternate gene name srlQ [Escherichia coli str. K-12 substr.
           MG1655]
 gi|13363035|dbj|BAB36987.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|209762008|gb|ACI79316.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762010|gb|ACI79317.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762012|gb|ACI79318.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762014|gb|ACI79319.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|209762016|gb|ACI79320.1| hypothetical protein ECs3564 [Escherichia coli]
 gi|262176875|gb|ACY27492.1| D-arabinose 5-phosphate isomerase [Escherichia coli LW1655F+]
          Length = 308

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|148557371|ref|YP_001264953.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
 gi|148502561|gb|ABQ70815.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
          Length = 334

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 127/337 (37%), Positives = 195/337 (57%), Gaps = 7/337 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
               + +  K  +  +   +      +  E + L+    +L  +    F  AVE I A +
Sbjct: 1   MYQARDIRAKVPAASRQRILDQGREVLGVEAQALTLQRDALDED----FARAVELILATQ 56

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           GRVV++G+GKSGHI  K+A+T ASTGTP+ FVH  EA+HGDLGM+   DL++VLS SG++
Sbjct: 57  GRVVVSGMGKSGHIARKMAATFASTGTPAIFVHPGEAAHGDLGMLLAGDLLVVLSNSGAT 116

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL  I+ YAR    P++AI+++  S +A  A   + LPK  E+CP  ++PTTS  + LA
Sbjct: 117 PELGPIMTYARDLGCPIVAISAQRHSPMARLASAAIILPKVRETCPVNISPTTSTTLMLA 176

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +GDALA+A +  R  +  +   LHPGG +G   +  +D+MH GD +PLV    P+ + + 
Sbjct: 177 LGDALAVATMSMRGITRAELERLHPGGHIGLRLLPINDIMHVGDRLPLVVATTPMREVLL 236

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           I++EK  G   V+D   +L G +T+GD+ RN  + LN++   DVM ++PK + + T    
Sbjct: 237 IMTEKSLGIAGVLDGDGRLVGTVTDGDLRRNIDRLLNSV-AGDVMTRHPKTVPDGTYAED 295

Query: 305 AMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLLRFG 339
           A  +L  + I+ L V+D       IG++H  D  R G
Sbjct: 296 AKAILAANKITALFVMDHDRPDTPIGLIHIHDFNRIG 332


>gi|256830976|ref|YP_003159704.1| KpsF/GutQ family protein [Desulfomicrobium baculatum DSM 4028]
 gi|256580152|gb|ACU91288.1| KpsF/GutQ family protein [Desulfomicrobium baculatum DSM 4028]
          Length = 331

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 120/322 (37%), Positives = 178/322 (55%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +  A   +  E +GL+++   L       F  A+E +    GRVVITG+GKSG +G
Sbjct: 7   QTDWLAKAREVLDIEAQGLAAVRDRL----GDSFVRALEVMAGCSGRVVITGLGKSGLVG 62

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TL+STGTPSFF+H  E +HGDLGMI  +D+I+ +S SG +DEL  IL   +  + 
Sbjct: 63  RKIAATLSSTGTPSFFLHPVEGAHGDLGMIRHEDVIVAISNSGETDELNNILPSLKSLAG 122

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T    S +A  +D+V+      E+CPHGLAPT S    LA+GDALA+ L++ ++F
Sbjct: 123 HVISLTGGIHSTMARLSDVVIDTSVPCEACPHGLAPTASTTATLAVGDALAVCLIDWKSF 182

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +DF   HPGG LG       + +     +P+V  G  L  A+ +L+    GCV VVD 
Sbjct: 183 ALDDFRRFHPGGALGQRLTKRVEELMRFSPLPVVPSGASLGQALDVLNAGGLGCVCVVDG 242

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G  L G++T+GD+ R        L   V+ VM  +P            + ++    I+VL
Sbjct: 243 GGHLLGLLTDGDVRRLVCAGRLALDAVVDSVMTASPLHATPGQKAAEVLDIMESRAITVL 302

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            VV   Q   G+VH  D+L  G
Sbjct: 303 PVVAPDQTLAGMVHMHDVLGQG 324


>gi|126209040|ref|YP_001054265.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           L20]
 gi|126097832|gb|ABN74660.1| arabinose-5-phosphate isomerase [Actinobacillus pleuropneumoniae
           serovar 5b str. L20]
          Length = 311

 Score =  305 bits (781), Expect = 7e-81,   Method: Composition-based stats.
 Identities = 119/311 (38%), Positives = 188/311 (60%), Gaps = 9/311 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + + SL + L  E    F+ A+E I + +GR+V+ GIGKSG +G K
Sbjct: 2   NYLASARETLSLYTQAIDSLHNRLSTE----FNQAIEMILSCEGRLVVAGIGKSGLVGQK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D++I++S SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVILISNSGETDDVNKLIPSLKGFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T  + S +A HADI+L +  E E+C + LAPTTS ++ +A+GDALAIAL+++RNF  
Sbjct: 118 IAMTGNSHSTLAQHADIILNIGVEKEACTNNLAPTTSTLVTMALGDALAIALIKARNFQA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C    +    S+P+V       + + I++E R G   V+ E  
Sbjct: 178 MDFARFHPGGSLGRKLLCTVKDVM-IRSLPIVSPTAIFSECLNIMNEGRIGVALVM-EHD 235

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GIIT+GDI R       +   ++ + +M KNPK ILE T L  A + ++  ++  L+
Sbjct: 236 CLLGIITDGDIRRLLADKGANSLLMTADQIMTKNPKTILESTFLAKAEEEMKSLHVHSLV 295

Query: 319 VVDDCQKAIGI 329
           V+++  + +GI
Sbjct: 296 VMNEENRVVGI 306


>gi|12517153|gb|AAG57815.1|AE005499_2 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
          Length = 308

 Score =  305 bits (781), Expect = 8e-81,   Method: Composition-based stats.
 Identities = 120/302 (39%), Positives = 172/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMXELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|89052564|ref|YP_508015.1| KpsF/GutQ family protein [Jannaschia sp. CCS1]
 gi|88862113|gb|ABD52990.1| KpsF/GutQ family protein [Jannaschia sp. CCS1]
          Length = 321

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 138/324 (42%), Positives = 194/324 (59%), Gaps = 6/324 (1%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +    S      R +  E R +++L  +L  +    F  A + I   KGRV++ GIGKSG
Sbjct: 3   NEHPQSLRDTGARVLHMEARAVATLADALPQD----FEPAAQAILGTKGRVILCGIGKSG 58

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HI  K+++T ASTGTPS FVHAAEASHGDLGM+   DL+I +S SG + EL  I+ +  R
Sbjct: 59  HICRKISATFASTGTPSAFVHAAEASHGDLGMMMPGDLVIAISNSGETAELNDIIAHVTR 118

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F+IPLI I+ +  S +   AD  LTLP   E+C  G+APTTS  + LA+GDALA+A++E 
Sbjct: 119 FAIPLIGISKKPDSTLMRAADFRLTLPAAAEACSLGMAPTTSTTLALALGDALAVAVMEQ 178

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R F    F   HPGGKLG      + +MH  D++PLV    P+ + + ++SEK FG   V
Sbjct: 179 RGFLPEQFRTFHPGGKLGAQLSTVAQLMHGPDALPLVHASTPMAETLVVMSEKSFGIAGV 238

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V EG +L G+I++GD+ RN    L   +  +V    P+ I  D L   AM ++  + I+ 
Sbjct: 239 V-EGGRLTGVISDGDLRRNIA-HLTDRTATEVATHQPRTIAPDVLAAEAMGMMAANKITA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L VVDD  + +G++H  DLLR G+
Sbjct: 297 LFVVDDTARPLGLIHLHDLLRAGL 320


>gi|260914118|ref|ZP_05920591.1| arabinose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
 gi|260631751|gb|EEX49929.1| arabinose 5-phosphate isomerase [Pasteurella dagmatis ATCC 43325]
          Length = 311

 Score =  304 bits (780), Expect = 9e-81,   Method: Composition-based stats.
 Identities = 117/299 (39%), Positives = 177/299 (59%), Gaps = 9/299 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A  ++  E++ LS L  +L       F   VE I   +GR+VI GIGKSG +G K
Sbjct: 2   NYLQIARETLQVEEKALSRLSKNL----DDSFSDIVELILNCQGRLVIGGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 58  MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNTI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HAD VL +  E E CP+ LAPTTS ++ +A+GDALA++L+++R+F  
Sbjct: 118 IALTGNPNSTLAKHADYVLDISVEREVCPNNLAPTTSVLVTMALGDALAVSLIKARDFQP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+  +  P  D +TI++E R G   V+ E  
Sbjct: 178 ADFAKFHPGGSLGRRLLCRVKDQMQTR-LPVTALHTPFTDCLTIMNEGRMGVALVM-EQG 235

Query: 262 KLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +LKGIIT+GDI R    +     + + +++M  NPK I  D  L+ A  L++   I  L
Sbjct: 236 ELKGIITDGDIRRALSANSVQTLSKTAQELMTSNPKTIHMDAFLSEADALMKAKKIHSL 294


>gi|167837701|ref|ZP_02464584.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis MSMB43]
          Length = 311

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 113/315 (35%), Positives = 171/315 (54%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+ L + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALAGLSARV----DESFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMAADDLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GDI R      +TL   +  D+M K+P ++   T +  A+ ++    I
Sbjct: 237 REVG--FGIVTDGDIRRAVEAHGDTLFRRTASDLMSKDPAMVPLGTRVEDALLMMETRRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFD-GGDVVGV 308


>gi|313674849|ref|YP_004052845.1| kpsf/gutq family protein [Marivirga tractuosa DSM 4126]
 gi|312941547|gb|ADR20737.1| KpsF/GutQ family protein [Marivirga tractuosa DSM 4126]
          Length = 313

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 110/318 (34%), Positives = 181/318 (56%), Gaps = 9/318 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++ A  +I  E + +  LES L  +    F  AV  I   KG++++TG+GKSG IG 
Sbjct: 2   SRILESAKETIAIEAKSIKDLESILTPD----FEQAVHAIMESKGKLIVTGMGKSGIIGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T +STGTPS+F+H  EA HGDLG+I  DD+++ +S SG +DEL  I+ +  R    
Sbjct: 58  KIAATFSSTGTPSYFLHPGEAYHGDLGLIQEDDIVMAISNSGETDELLKIIPFFLRNGNK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I ++   +S +A +    L +  E E+CP  LAPT+S    L +GDALA+AL++ R+F 
Sbjct: 118 IIGVSGNPESTLAKNTHFHLNVHVEQEACPLDLAPTSSTTATLVMGDALAVALMKERDFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F + HPGG LG   +     +     +P++     +   I  +S  R G   +++E 
Sbjct: 178 PEHFALFHPGGSLGRRLLMTVKDVMRSSDLPVIDSHSDMDVVIHSISNGRLGLA-IIEEN 236

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +L G+IT+GD+ R  +       +L  +D+M K+P  I ++  L  A +++ +  I+ L
Sbjct: 237 GELVGVITDGDLRRGMNAQKESFLSLKAKDIMTKSPISIDKEMKLKKAEEMMMECKINTL 296

Query: 318 MVVDDCQKAIGIVHFLDL 335
           +VV + QK +G++   DL
Sbjct: 297 LVV-ENQKCVGVLQVYDL 313


>gi|158335348|ref|YP_001516520.1| KpsF/GutQ family sugar isomerase [Acaryochloris marina MBIC11017]
 gi|158305589|gb|ABW27206.1| sugar isomerase, KpsF/GutQ family [Acaryochloris marina MBIC11017]
          Length = 334

 Score =  304 bits (780), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 116/318 (36%), Positives = 180/318 (56%), Gaps = 10/318 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           ++ E   ++     LQ E   Q + AV+ +    G+VV++G+GKSG +  K+A+TL S G
Sbjct: 20  LLLEAEAIAKAADRLQPE---QVNQAVDLMINCSGKVVLSGVGKSGIVARKIAATLTSVG 76

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             + F+H  EA HGDLG++   D+++VLS SG +DEL A+L   ++  +PLIA+     S
Sbjct: 77  VMAVFLHPVEALHGDLGIVATTDVVVVLSNSGETDELIAMLPCLKQRQVPLIALVGNVNS 136

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD+VL    + E+CP  LAPT S  + +AIGDALA+ +  ++  +   F V HP 
Sbjct: 137 TLADEADVVLAATVDQEACPMNLAPTASTTVAIAIGDALAMTVTHAKGVTPEAFAVNHPA 196

Query: 211 GKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G+LG  L +  SD+MH G   P +      ++ +T +S+   G V VV+  Q+L GI+T+
Sbjct: 197 GRLGKRLTIKVSDLMHQGSEHPCISSEASWLEIVTSISQGGLGAVNVVNAQQQLLGIVTD 256

Query: 270 GDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NISVLMVVDDC 323
           GD+ R   K    DL  +  E +M  NP     D L   A+Q++      ISVL VVD  
Sbjct: 257 GDLRRAMEKIRPVDLEQMKAEKIMTANPITAAPDQLAYDALQVMEDRPSQISVLPVVDPD 316

Query: 324 QKAIGIVHFLDLLRFGII 341
            + +G++   D+ + G+I
Sbjct: 317 DRCVGVLRLHDIAQAGLI 334


>gi|288800039|ref|ZP_06405498.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 299 str.
           F0039]
 gi|288333287|gb|EFC71766.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 299 str.
           F0039]
          Length = 324

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 109/319 (34%), Positives = 190/319 (59%), Gaps = 8/319 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
             S+   S  + A++ +  E   L  L      +L+  F  A++ +   KG+V++TG+GK
Sbjct: 4   SESINITSIRENAIQCLKDEAEALLQLI----PQLNENFDKAIQMMYHCKGKVIVTGVGK 59

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG+IG+K+A+TL+STGTPSFF++  +  HGDLG++T DD+++ LS SG +DEL   L   
Sbjct: 60  SGNIGAKIAATLSSTGTPSFFINPLDVFHGDLGVMTPDDVVLALSNSGQTDELLRFLPMV 119

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++P+I+++S  +S++A ++   + +  E E+CP  LAPT+S    LA+GDA+A+AL+
Sbjct: 120 LQMNVPIISMSSNPQSLLAKYSTAHIQVKVEKEACPLNLAPTSSTTAALAMGDAIAVALM 179

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + R+F   DF   HPGG+LG   +  +  +   + +P++     L +AI  +S+ + G +
Sbjct: 180 KVRDFKPKDFAQFHPGGELGKRLLTTAADVMRKNDLPVIPKEMNLGEAIIHVSKGKLG-L 238

Query: 255 AVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            V  E +++ G+IT+GDI R             V D+M   PK +  +T L+  ++++ +
Sbjct: 239 GVSIEDEQVIGLITDGDIRRAMETWKAQFFDKKVADIMTTTPKSVAPETKLSEILRIMNK 298

Query: 312 HNISVLMVVDDCQKAIGIV 330
           + I  ++VVD     +GIV
Sbjct: 299 YKIHTVLVVDSSNHLLGIV 317


>gi|169837063|ref|ZP_02870251.1| arabinose 5-phosphate isomerase [candidate division TM7 single-cell
           isolate TM7a]
          Length = 320

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 118/324 (36%), Positives = 192/324 (59%), Gaps = 10/324 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  ++ A   +  E   L+    +L      +F  AV  +  +KG++V+TG+GKSGHIG+
Sbjct: 2   NDILKTAREVLTLEANELTQNALTLN----EKFVSAVRTMFDVKGKIVVTGVGKSGHIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTPSFF+H  EA HGDLGMI++DD ++ +S+SG S+E+  IL + +RF + 
Sbjct: 58  KIAATLASTGTPSFFLHPTEAMHGDLGMISKDDAVLAISFSGESEEVVRILPHVKRFGVK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I +  +  S +   +D  + L  + E+CP G APT+S  + LA+GDALA+ L++ RNF 
Sbjct: 118 VIGMARKESSSLGKFSDEFIKLDVKKEACPLGAAPTSSTTLTLALGDALAVCLMKMRNFK 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           + DF   HPGG LG      +  +   +++P+V     L  AI  ++  + G V + +  
Sbjct: 178 QEDFANFHPGGSLGKRLFVKAKDVMRSENLPIVSENVSLKAAIDAMTHGKVGNVLLTNTN 237

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISV 316
            KL  ++++GD+ R       D+N  +++    KNPK++  E+ L   A+ L+ ++ I +
Sbjct: 238 GKLVAVLSDGDLRRALMSENFDINDSAIK-YATKNPKILDDENILAVDALTLIEKYKIQL 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L+VV +    IGI+H  DL   G+
Sbjct: 297 LVVVKNS-VPIGILHIHDLTSLGL 319


>gi|300870475|ref|YP_003785346.1| polysialic acid capsule expression protein [Brachyspira pilosicoli
           95/1000]
 gi|300688174|gb|ADK30845.1| polysialic acid capsule expression protein [Brachyspira pilosicoli
           95/1000]
          Length = 323

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 126/298 (42%), Positives = 180/298 (60%), Gaps = 10/298 (3%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
              F  AV ++  IKGRV+ +G+GKSGHI  K AST ASTGTPSFFV   E  HGD GMI
Sbjct: 26  DDNFEKAVNELFNIKGRVITSGVGKSGHIARKAASTFASTGTPSFFVDPNECLHGDFGMI 85

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T++D +++ S  G S E+  ++ ++ R +IP IAIT++  S ++ +A I L    + E+C
Sbjct: 86  TKNDYLVLYSKGGESREIIELVNWSCRQNIPYIAITNDEFSTLSKNAKITLLTHVKEEAC 145

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           P  LAPT S    LA+ DALA AL+E R F   DF + HPGG LG        +MH+ D+
Sbjct: 146 PLKLAPTVSTTASLALSDALATALMELRGFKAEDFAIFHPGGSLGRQLAKVKTIMHT-DN 204

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLS 284
           +P++ +   L DA+  + E + G   + D+   LKGII +GD+ R   KD     +  + 
Sbjct: 205 LPIINLETSLYDALFKIIECKLGIAIITDDNGILKGIIVDGDLKRLLVKDKQIENILKIK 264

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLLRFG 339
           V+D+M  NPKVI +DTL+  A+ L+    I+ L+VV+   D +K IGIVH  D+L+  
Sbjct: 265 VKDIMNNNPKVIYQDTLIGEALHLME-GKITNLVVVEDTKDGKKPIGIVHIHDILKIK 321


>gi|303237607|ref|ZP_07324167.1| putative arabinose 5-phosphate isomerase [Prevotella disiens
           FB035-09AN]
 gi|302482059|gb|EFL45094.1| putative arabinose 5-phosphate isomerase [Prevotella disiens
           FB035-09AN]
          Length = 316

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 112/313 (35%), Positives = 186/313 (59%), Gaps = 8/313 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S  + A++ I  E     +L      +L   F  AVE +   KG+V++TG+GKSG+IG+
Sbjct: 2   KSIREYAIQCIQDEANATLALID----QLDENFDKAVELMYHCKGKVIVTGVGKSGNIGA 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TL+STGTP+FF +  +  HGDLG +T+DD+++ LS SG +DEL   +      +IP
Sbjct: 58  KIAATLSSTGTPAFFANPLDVFHGDLGAMTKDDVVLALSNSGQTDELLRFIPMVLHMNIP 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I +++  +S++A +A   + +  E E+CP  LAPT+S    L +GDALA+AL+E R F 
Sbjct: 118 IIGMSAHPESLLAKYATAHIKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMEKRKFR 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             DF   HPGG+LG   +  +  +   + +P++     L +AI  +S  + G + V  E 
Sbjct: 178 PTDFAQFHPGGELGKRLLTTAQDVMRSEDMPIIPKDMHLGEAIIHVSNGKLG-LGVSIEN 236

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            K+ G+IT+GDI R   K        +VED+M + PK++L +T +    ++++Q+ I  +
Sbjct: 237 DKVIGLITDGDIRRAMEKWQAKFFDHTVEDIMTRQPKMVLPNTKIAEIQRIMQQNKIHTV 296

Query: 318 MVVDDCQKAIGIV 330
           +V ++  K +G+V
Sbjct: 297 LVCNENGKLLGVV 309


>gi|299139550|ref|ZP_07032724.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX8]
 gi|298598478|gb|EFI54642.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX8]
          Length = 384

 Score =  304 bits (779), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 110/314 (35%), Positives = 166/314 (52%), Gaps = 10/314 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHIGSKLASTLA 87
           +  E + L  L   L G     F      +        R V+TG+GKSG IG K+A+TL 
Sbjct: 45  VRIEAQALLELAGRLDGPQLRAFDHVAGLLAEKARAGHRTVVTGVGKSGLIGRKIAATLV 104

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGTP+ F+H  EA HGDLG++   D+++ LS+SG ++EL  +L    R  + LI+    
Sbjct: 105 STGTPAQFLHPGEALHGDLGILNHGDILLALSYSGETEELLRLLPVLSRLGVTLISFCGC 164

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  +   L +    E+C H LAPT S    LA+GDALAI +    +F   DF  L
Sbjct: 165 PTSTLATSSAYTLDVSVSREACNHQLAPTASTTAMLALGDALAIDVSRRLHFKARDFAEL 224

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPGG+LG        +MHSGD++P V    P+ + I  +S KR G   V  +  +L G++
Sbjct: 225 HPGGQLGRRLATVKQLMHSGDALPQVPPAAPMTEIIHEMSAKRLGMTTV-QKNGELLGVL 283

Query: 268 TEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           ++GD+ R   +D       +  +VM  +P++I  +     A+ L+ QH I+ L+V +D  
Sbjct: 284 SDGDLRRLLERDGPGAFHKTAAEVMNPHPRLIAPEPFAVDALALMEQHKITALVVTEDGT 343

Query: 325 K---AIGIVHFLDL 335
                +G++H  DL
Sbjct: 344 VTSPVLGVLHLHDL 357


>gi|294785514|ref|ZP_06750802.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 3_1_27]
 gi|294487228|gb|EFG34590.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 3_1_27]
          Length = 323

 Score =  304 bits (778), Expect = 1e-80,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYETE---IKSLELRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNDENNVLVGIITEGDIRRALRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D  +  +G++   DLL+
Sbjct: 297 HQINVLPVFDKDE-FVGVIRIHDLLK 321


>gi|260655089|ref|ZP_05860577.1| arabinose 5-phosphate isomerase [Jonquetella anthropi E3_33 E1]
 gi|260630200|gb|EEX48394.1| arabinose 5-phosphate isomerase [Jonquetella anthropi E3_33 E1]
          Length = 337

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 120/335 (35%), Positives = 185/335 (55%), Gaps = 9/335 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
              R    +     +Q     +  E   L          +      A   +   +GR+V+
Sbjct: 7   PADRTPVQIDDAKLLQVGTSVLREEASELIRAAD----RMGESLCKAARLVAGCRGRLVV 62

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
           +G+GKSGH+G K+++TLAS GTPSFFVHAAEA+HGDLGM+ ++D  +++S SG + E+ +
Sbjct: 63  SGMGKSGHVGRKISATLASLGTPSFFVHAAEAAHGDLGMVRQEDAALLISHSGKTAEVVS 122

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +  + +R   P+IAIT +  S +A  +D+VL      E+ P  LAPT+S  +QLAIGDAL
Sbjct: 123 LAPFFKRLGAPVIAITGDLSSPLAAASDLVLDASVLREADPLNLAPTSSTTLQLAIGDAL 182

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           +  +   R+    DF + HP G LG    +   DVM +GD +PLV+    +  +I  ++ 
Sbjct: 183 SSMVTVLRDLKREDFALFHPAGSLGKQLLLRVCDVMGTGDRLPLVRAETTVQSSIFEMTS 242

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVA 305
           K +G   VVD+  +L GI T+GD+ R   K   +   L V  VM  +P  I  D L   A
Sbjct: 243 KGYGATIVVDDQGRLLGIFTDGDLRRLLTKSGIEALNLPVSQVMTHSPLTISGDQLAVQA 302

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++L+ Q  +SVL+V    +  +GI+H  +LL+ G+
Sbjct: 303 VRLMEQKEVSVLIVT-RGEFPVGIIHLHELLQSGV 336


>gi|73856749|gb|AAZ89456.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 308

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/302 (39%), Positives = 171/302 (56%), Gaps = 2/302 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGT +FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTSAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M   D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R      
Sbjct: 187 HHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGG 246

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + G
Sbjct: 247 ALTTPVNEAMTTGGTTLQAQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAG 306

Query: 340 II 341
           II
Sbjct: 307 II 308


>gi|148556866|ref|YP_001264448.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
 gi|148502056|gb|ABQ70310.1| KpsF/GutQ family protein [Sphingomonas wittichii RW1]
          Length = 330

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 126/322 (39%), Positives = 191/322 (59%), Gaps = 7/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++   + + AE   L  LE+ L       F  AV  + A +GR+V+TG+GKSGHI  
Sbjct: 13  KQLLERGRQVLRAEIDALLQLEAYL----DDNFAGAVRMLDATQGRIVVTGMGKSGHIAR 68

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T A+TG+P+ F+H AEA+HGDLGM+ + D +IVLS SGS+ EL  I+ + R   I 
Sbjct: 69  KMAATFAATGSPAIFIHPAEAAHGDLGMVQQGDTLIVLSNSGSTPELTPIMQHCRSMRIR 128

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I I S   S V   +D+ L LP+  E+CP  +APT+S  M LA+GDAL +AL++ R  +
Sbjct: 129 IIGIASRLDSPVMQASDVRLLLPQVREACPSNIAPTSSTTMMLALGDALGMALMDLRGVA 188

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            ++   LHPGG +G   +  S++MH G S+PLV+   P+ + I  ++   FG   VVD+ 
Sbjct: 189 RDNIKKLHPGGAIGLRLMAVSEMMHGGASLPLVRRDTPMREVIMTMTSMGFGAAGVVDDD 248

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+IT+GD+ R+   DL       VM +NPK +   TL   A+ ++    I+ + V+
Sbjct: 249 GRLVGVITDGDLRRHVG-DLGDGVAAAVMTRNPKTVPLGTLAEDALMIMNDCKITTVFVM 307

Query: 321 DDC--QKAIGIVHFLDLLRFGI 340
           +D       GIVH  D +R+G+
Sbjct: 308 EDERPDTPAGIVHIHDFVRYGL 329


>gi|300777719|ref|ZP_07087577.1| arabinose-5-phosphate isomerase [Chryseobacterium gleum ATCC 35910]
 gi|300503229|gb|EFK34369.1| arabinose-5-phosphate isomerase [Chryseobacterium gleum ATCC 35910]
          Length = 319

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 118/325 (36%), Positives = 190/325 (58%), Gaps = 9/325 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + + + +  A  ++  E   L  L++ +      QF  AVE I +  G++++ GIGKS H
Sbjct: 1   MDRTNIISIAKSTLEIEISELEKLKNRI----DDQFARAVEIIHSANGKLIVVGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+ +TL STGTPS F+HA+EA HGDLG+I + D+++ +S SG+S E+  ++ Y + +
Sbjct: 57  VGNKIVATLNSTGTPSQFLHASEAIHGDLGVIQKQDVVLCISNSGNSPEIANLVPYLKDY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  LI +T    S +A  ++++L    + E+CP+ LAPT+S  +Q+A+GDALA+AL+E  
Sbjct: 117 SSALIGMTGNKTSKLAEFSEVILDTHVDIEACPNKLAPTSSTTIQMALGDALAVALMELN 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F  NDF   HPGG LG       +   S      V    P+ D I  +S    G   V 
Sbjct: 177 DFKANDFAKFHPGGSLGKNLTSKVEQFLSSQKPQ-VTEDSPIRDVIISISASSHGITVVT 235

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +E  ++ G+IT+GD+ R   K  D++ +  +D+M  +P+ I +D L   AM++L+++NI 
Sbjct: 236 NED-QIIGVITDGDLRRMLMKGEDISKVLAKDIMSAHPRTIEKDALAKEAMKILKENNIG 294

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
            L VV +  K  GI+    LL  GI
Sbjct: 295 QL-VVTENGKYFGIIDLHKLLDEGI 318


>gi|302344542|ref|YP_003809071.1| KpsF/GutQ family protein [Desulfarculus baarsii DSM 2075]
 gi|301641155|gb|ADK86477.1| KpsF/GutQ family protein [Desulfarculus baarsii DSM 2075]
          Length = 338

 Score =  304 bits (778), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 121/326 (37%), Positives = 172/326 (52%), Gaps = 11/326 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   V+   + +  E +GL      +   L   F  AVE I A KG++V TGIGKSG I 
Sbjct: 6   RQKIVERGRQVLAVEIQGL----QRVGQRLDDGFAQAVELILASKGKIVATGIGKSGIIA 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL STG  + F+H  EA HGDLG +   D+++ LS SG +DEL  +    R    
Sbjct: 62  RKIVATLNSTGANAIFLHPVEALHGDLGTVCPGDVVLALSNSGQTDELVNLTPQLRGHGA 121

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++A+T    S +A  AD V+    E E+CP  LAPT S    +A+GDALA+ L+E R F
Sbjct: 122 KIVALTGGMGSALARAADAVIDTGVEREACPFNLAPTASTTACMAVGDALAVVLMEIRAF 181

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV- 257
              DF   HPGG LG  L +  S+VM   D  PL     P+  A+ ++     G V +  
Sbjct: 182 KPEDFRRHHPGGNLGQRLALAVSEVMIPADKTPLAAPDDPVQKAVAVMDAGDLGSVLITS 241

Query: 258 --DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
               G +L G+ T+GD+ R     +DL+   +E  M + P VI   T+   A+ L+ +  
Sbjct: 242 GGRPGTELLGLFTDGDLRRAMVAGRDLSVGPIERFMTRRPLVIGPTTMAADALHLMEERL 301

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFG 339
           I+VL VVD   + +GIVH  D+L  G
Sbjct: 302 ITVLPVVD-QGRLLGIVHLHDVLGRG 326


>gi|237736451|ref|ZP_04566932.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           mortiferum ATCC 9817]
 gi|229421493|gb|EEO36540.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           mortiferum ATCC 9817]
          Length = 322

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 126/323 (39%), Positives = 190/323 (58%), Gaps = 11/323 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M+ + V  A     AE   L  +++SL G+++      VE I  +KG+VV+TGIGKSG I
Sbjct: 1   MEFNEVDYARSVFEAEIEELGRVKNSLDGDIT----KVVELILGMKGKVVVTGIGKSGLI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGT + F+++AE  HGDLGMI  +D+++ +S SG+SDE+ ++L   ++  
Sbjct: 57  GKKIAATLASTGTTAIFMNSAEGLHGDLGMIAPNDVVLAISNSGNSDEIVSLLPSIQKIG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L+A+T    S +   AD VL +    E CP  LAP +SA   L +GDALA  L++ R+
Sbjct: 117 AKLVAMTGNRNSKLGKAADYVLNIGVSREGCPLNLAPMSSATATLVMGDALAAILIKRRD 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F   +F + HPGG LG  L +   D+M  GD IP+     P+ + I  +++K  G V V+
Sbjct: 177 FRPENFALYHPGGSLGKRLLMRVRDIMKKGDEIPVCDKESPIKNVILTMTDKSLGAVCVM 236

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--N 313
           + G  + GIITEGDI R   K  +  T   +D+M +N      +++   A++L+      
Sbjct: 237 N-GDLMVGIITEGDIRRALTKEGEFFTFKAKDIMTRNFTRTDSNSMAIDALELMENRPSQ 295

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I+VL V+DD  K +G+V   DLL
Sbjct: 296 ITVLPVIDD-NKLVGMVRVHDLL 317


>gi|94986528|ref|YP_594461.1| CBS domain-containing protein [Lawsonia intracellularis PHE/MN1-00]
 gi|94730777|emb|CAJ54139.1| FOG: CBS domain [Lawsonia intracellularis PHE/MN1-00]
          Length = 360

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 119/321 (37%), Positives = 184/321 (57%), Gaps = 6/321 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A   +  E  G+     +++  L   F  A+  + + KGRV++TG+GKSG +G K+
Sbjct: 39  LLKLAHEVLTIEMDGIE----TIRERLGNTFVEALLLLSSCKGRVIVTGVGKSGLVGRKI 94

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+T +STGTP+FF+H  E +HGD+G +   DLI+ +S SG + EL AI+   + F  P+I
Sbjct: 95  AATFSSTGTPAFFMHPVEGAHGDIGSLKSSDLILSISNSGETPELNAIVPTIKSFGTPMI 154

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+TS   S +A  A++VL      E+CPHGLAPT S    LA+GDA+A+ L+  ++F+E 
Sbjct: 155 ALTSVLNSTLAKAANVVLHTEVPKEACPHGLAPTASTTAVLALGDAIAVCLMSLKSFTEK 214

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG     +   +   D +P V +G    +A+  L +   G V ++D+   
Sbjct: 215 DFLRYHPGGMLGQRLTLSVTEVMRTDGLPTVHLGTSQCNALKTLDKGGLGVVLIIDKKNT 274

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GIIT+GD+ R+   ++      VE +M   PK       + + + ++ Q  I+VL +V
Sbjct: 275 VCGIITDGDVRRSICYNRLKQDAPVEQIMTPRPKCGKPQDTIAILLDIMEQKAITVLPIV 334

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           DD  K +GIVH  DLL  G I
Sbjct: 335 DDNYKLLGIVHIHDLLGKGTI 355


>gi|157164706|ref|YP_001467824.1| arabinose 5-phosphate isomerase [Campylobacter concisus 13826]
 gi|112801833|gb|EAT99177.1| arabinose 5-phosphate isomerase [Campylobacter concisus 13826]
          Length = 317

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/319 (35%), Positives = 179/319 (56%), Gaps = 10/319 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A   +  E   L      L+   S +   AV  I   KG+V++TG+GKSGH+G+K+A+
Sbjct: 6   QIAAEVLEIEANEL------LRHAKSVEIEDAVNLIFNAKGKVIVTGVGKSGHVGAKIAA 59

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  EA HGDLGMI +DD+++ +S+SG SDEL  IL + +RF + ++A+
Sbjct: 60  TLASTGTPSFFLHPTEAMHGDLGMIEKDDILLAISFSGESDELIKILPHVKRFGVKIVAM 119

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
                S +   +D  + +  E E+CP   APT S  + LA+GDALA+ L++ R F + DF
Sbjct: 120 ARSKTSSLGKFSDAFIDINVEKEACPLNAAPTASTTLTLALGDALAVCLMQKRGFKKEDF 179

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +   +++P+V+    L  AI  ++  + G V ++ +   L 
Sbjct: 180 ANFHPGGSLGKRLFLKVKDVMRSENLPIVRWNATLKSAIDTMTHGKLGTVLIIGKDGVLD 239

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVD 321
            ++++GD+ R   ++   L          +PK I + + L   A+ L+ ++ I +L VV 
Sbjct: 240 ALLSDGDLRRALMREDFDLEEPAMKFATLHPKEINDKEMLAVDALALIEKYKIQLLAVV- 298

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +    +G++H  DL   G+
Sbjct: 299 ENGVPVGVLHIHDLANLGL 317


>gi|330995728|ref|ZP_08319626.1| arabinose 5-phosphate isomerase [Paraprevotella xylaniphila YIT
           11841]
 gi|329574787|gb|EGG56348.1| arabinose 5-phosphate isomerase [Paraprevotella xylaniphila YIT
           11841]
          Length = 316

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 113/309 (36%), Positives = 176/309 (56%), Gaps = 8/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A++    E + +  L      +L   F  AV+ +    G+V+ITG+GKSGHIG+K+A+
Sbjct: 6   DIAVKCFRDEAQAILDLI----PQLDEHFDAAVDLMLRCTGKVIITGVGKSGHIGAKMAA 61

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF++  +  HGDLG++T DD++I +S SG +DEL   + Y     IPLI I
Sbjct: 62  TLASTGTPAFFINPLDVFHGDLGVMTPDDVVIAISNSGQTDELLRFIPYLLEHHIPLIGI 121

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           +    S++A ++   L +    E+CP  LAPT+S    LA+GDALA AL+E R+F   DF
Sbjct: 122 SGNPDSLLAKYSTCHLVVKVSHEACPLNLAPTSSTTATLAMGDALACALIEMRHFQAKDF 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +  +  +   + +P++  G  L +AI  +S+ + G + V     K+ 
Sbjct: 182 AQFHPGGTLGKRLLTTAHDVMRSNDLPVIPPGMKLGEAIIHVSKGKLG-LCVAMVNDKVV 240

Query: 265 GIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GD+ R           + VE VM + PK +  DT +     ++  + I  ++VVD
Sbjct: 241 GLITDGDVRRAMESLQDKFFNVPVEQVMTRTPKCVSPDTKIAKIQDIMHNNKIHTVLVVD 300

Query: 322 DCQKAIGIV 330
           D +  +G+V
Sbjct: 301 DDRHLLGVV 309


>gi|269120423|ref|YP_003308600.1| KpsF/GutQ family protein [Sebaldella termitidis ATCC 33386]
 gi|268614301|gb|ACZ08669.1| KpsF/GutQ family protein [Sebaldella termitidis ATCC 33386]
          Length = 319

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 127/321 (39%), Positives = 184/321 (57%), Gaps = 11/321 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + ++  A R   AE   L  ++  L       F   V+ I    G+VVITGIGKSGHIG 
Sbjct: 2   DKSLTEAKRVFEAEIEELVKVKDRL----DENFSKMVDMIYESSGKVVITGIGKSGHIGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++TLASTGT S F++AAEA HGDLG+I + D+++ +S SG+SDE+  IL   RR    
Sbjct: 58  KISATLASTGTNSVFINAAEALHGDLGVIKKGDIVLAISNSGNSDEISNILPSVRRIGAD 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA T    S +   AD+++ +  + E+CP GLAP TSA + L +GDALA AL++ R+F 
Sbjct: 118 IIAFTGNKISALGKEADLIINIAIDKEACPMGLAPMTSATVTLVMGDALAAALMQKRDFK 177

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             ++ V HPGG LG    +   D+MH  D +P +     +   +  L++K+ G V +  E
Sbjct: 178 PENYAVYHPGGSLGRRLLLKVKDLMHKNDELPKLTKDTHIDTVLMELTKKKMGAVCI-AE 236

Query: 260 GQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
             +L GIITEGDI R     +     + EDVM KNP  +  +     A++ +      I+
Sbjct: 237 DDRLIGIITEGDIRRALTHKEKFFDYTAEDVMTKNPVYVTPEIQAIEALEKMEARESQIT 296

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
           VL VVD+  K +GI+   DLL
Sbjct: 297 VLPVVDND-KLVGIIRIHDLL 316


>gi|325954270|ref|YP_004237930.1| KpsF/GutQ family protein [Weeksella virosa DSM 16922]
 gi|323436888|gb|ADX67352.1| KpsF/GutQ family protein [Weeksella virosa DSM 16922]
          Length = 322

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 115/325 (35%), Positives = 178/325 (54%), Gaps = 6/325 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + + +    A    + E + +      +   LS  F  AV +I    G++V+ GIGKS H
Sbjct: 1   MEEKNLTFIAKEVFLEEAKEIEL----IANRLSDSFSQAVREIFNTNGKLVVCGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+ +TL STGTPS F+HAAEA HGDLG++ ++D+ + +S SG++ E+K +    +  
Sbjct: 57  IANKIVATLNSTGTPSQFLHAAEAIHGDLGLLQKEDVCLCISNSGNTPEIKLLSPILKNR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  LIAIT   +SV+A  AD VL      ES    LAPT+S   QL +GDA+A+AL+E R
Sbjct: 117 AKSLIAITGNTESVLAKTADYVLDASVSKESGRLNLAPTSSTTAQLVMGDAIAVALMELR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F + DF   HPGG LG   +   D +      P V    P+ + I  ++  + G   + 
Sbjct: 177 KFEKQDFAKYHPGGALGKRLLWRVDNIVDTSKKPQVSADAPMTEVIDSMTTGKMGITTIT 236

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+  K+ G+IT+GD+ R    H +   L  +D+   +PK I +  L   A+ L+R ++I 
Sbjct: 237 DKDNKVLGVITDGDLRRMLIEHPNFQHLKAKDIATMHPKKINKTALAATALDLIRNNSIG 296

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
            ++VVDD  K  G++    +L  GI
Sbjct: 297 QIIVVDDTDKYYGVLDIHSILAEGI 321


>gi|317152918|ref|YP_004120966.1| KpsF/GutQ family protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316943169|gb|ADU62220.1| KpsF/GutQ family protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 343

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 184/323 (56%), Gaps = 6/323 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            +   ++ A   +  E  GL     ++ G+L   F  A+  +   +GRVVITGIGKSG +
Sbjct: 6   DRTDWLELAREVLDIEIEGL----RTVSGQLGDGFVRALTLMAECRGRVVITGIGKSGLV 61

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+STGTP+FF+H  E +HGD+GMI  +D+++ LS SG SDE+ AI+   R   
Sbjct: 62  GRKIAATLSSTGTPAFFLHPVEGAHGDMGMIRSEDVVLALSNSGGSDEVNAIIPTLRSLG 121

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA+T    S +A  ADI + +    E+CP GLAPT+S    LA+GDALA+ L+E ++
Sbjct: 122 ATVIAMTGNTASAMAELADITIEVRVPREACPMGLAPTSSTTAHLAVGDALAVCLMEWKS 181

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F ++DF   HPGG LG       D +     +P+V     + +AIT L+    G VA++D
Sbjct: 182 FGQDDFRKFHPGGSLGQRLAMCVDQLMHTADLPVVTDTVTVREAITALNSGGLGLVAIID 241

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            G  L+G+ T+GD+ R    D   +   V  VM  +P+  +        + ++ Q+ I+V
Sbjct: 242 AGTMLRGVFTDGDVRRLVCSDAMDMDRPVAGVMTVSPRRAVVGESSAHVLDVMEQNEITV 301

Query: 317 LMVVDDCQKAIGIVHFLDLLRFG 339
           L VV +  +  G+VH  DLL  G
Sbjct: 302 LPVVLEDGRLAGMVHLHDLLGKG 324


>gi|254258478|ref|ZP_04949532.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
 gi|254217167|gb|EET06551.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1710a]
          Length = 311

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 112/315 (35%), Positives = 171/315 (54%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +    S  F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----SDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|167895672|ref|ZP_02483074.1| putative capsule expression protein [Burkholderia pseudomallei
           7894]
          Length = 311

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 170/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNTRSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|254180819|ref|ZP_04887417.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
 gi|184211358|gb|EDU08401.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1655]
          Length = 311

 Score =  303 bits (777), Expect = 2e-80,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 170/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 CETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|134280148|ref|ZP_01766859.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 305]
 gi|254299089|ref|ZP_04966539.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
 gi|134248155|gb|EBA48238.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 305]
 gi|157809046|gb|EDO86216.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 406e]
          Length = 311

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 169/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+ +R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMRAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|126438820|ref|YP_001060222.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 668]
 gi|126452561|ref|YP_001067486.1| KpsF/GutQ family sugar isomerase [Burkholderia pseudomallei 1106a]
 gi|167720997|ref|ZP_02404233.1| putative capsule expression protein [Burkholderia pseudomallei
           DM98]
 gi|167739970|ref|ZP_02412744.1| putative capsule expression protein [Burkholderia pseudomallei 14]
 gi|167817191|ref|ZP_02448871.1| putative capsule expression protein [Burkholderia pseudomallei 91]
 gi|167825603|ref|ZP_02457074.1| putative capsule expression protein [Burkholderia pseudomallei 9]
 gi|167847088|ref|ZP_02472596.1| putative capsule expression protein [Burkholderia pseudomallei
           B7210]
 gi|167904065|ref|ZP_02491270.1| putative capsule expression protein [Burkholderia pseudomallei NCTC
           13177]
 gi|167912322|ref|ZP_02499413.1| putative capsule expression protein [Burkholderia pseudomallei 112]
 gi|226194235|ref|ZP_03789834.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237813613|ref|YP_002898064.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           MSHR346]
 gi|242317929|ref|ZP_04816945.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
 gi|254194882|ref|ZP_04901312.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|126218313|gb|ABN81819.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 668]
 gi|126226203|gb|ABN89743.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106a]
 gi|169651631|gb|EDS84324.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei S13]
 gi|225933700|gb|EEH29688.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237504710|gb|ACQ97028.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei
           MSHR346]
 gi|242141168|gb|EES27570.1| sugar isomerase, KpsF/GutQ family [Burkholderia pseudomallei 1106b]
          Length = 311

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 170/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|223940272|ref|ZP_03632130.1| KpsF/GutQ family protein [bacterium Ellin514]
 gi|223891039|gb|EEF57542.1| KpsF/GutQ family protein [bacterium Ellin514]
          Length = 336

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 107/323 (33%), Positives = 189/323 (58%), Gaps = 4/323 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A      E   L  + + L           V+ ++  +G++++ GIGKSG IG K
Sbjct: 15  SHLARAREVFDIELAALKGVRNLLDESFDQAVELVVDTLRR-RGKIIVVGIGKSGAIGRK 73

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TL+STG+ S  +++ +A HGDLG++   DLI+ LS+SG S+EL  ++   +RFS+ L
Sbjct: 74  IAATLSSTGSTSVVLNSVDAVHGDLGIVNDGDLILALSYSGESEELLNLMPALKRFSVKL 133

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+IT   KS +A ++D+VL +    E+CP  LAPT+S  + L +GDALA+A+L++R F +
Sbjct: 134 ISITGVPKSSLARYSDVVLNVKVAKEACPFNLAPTSSTTVTLVMGDALAMAVLQARGFKK 193

Query: 202 NDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF   HP G +G    +   ++M +G    + +    + +A+ +++  + G ++VV+  
Sbjct: 194 QDFARRHPAGAIGRAMLLKVGEIMRTGQRNAVAQETLAVKEALMVMTRAKTGSLSVVNSK 253

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL G+ T+GD  R+     DL +  V+ VM +NP  I ++ L   A+++  + NI  L+
Sbjct: 254 GKLVGVFTDGDFRRHMATNNDLLSQPVKTVMTRNPICIRDEALAQEALKIFNERNIDDLI 313

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VV+  ++ +G++   DL +  ++
Sbjct: 314 VVNARREPVGLIDSQDLPKLKLM 336


>gi|304382235|ref|ZP_07364742.1| arabinose 5-phosphate isomerase [Prevotella marshii DSM 16973]
 gi|304336592|gb|EFM02821.1| arabinose 5-phosphate isomerase [Prevotella marshii DSM 16973]
          Length = 324

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 112/311 (36%), Positives = 185/311 (59%), Gaps = 8/311 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            V+  ++ I  E + L  L      ++   F  AV  + A KG++++TG+GKSG+IG+K+
Sbjct: 12  AVEYGVQCIKDEAQALQELI----PQVDDNFAAAVAMMYACKGKIIVTGVGKSGNIGAKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   L      ++P+I
Sbjct: 68  AATLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFLPMVLHMNVPII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+++   S++A ++ I L +    E+CP  LAPT+S    L +GDALA+AL+  R+F   
Sbjct: 128 AMSANPASLLAKYSTIHLKVKVNKEACPLNLAPTSSTTAALTMGDALAVALMRVRDFKPR 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG+LG   +  +  +   D++P++    PL +AI  +S  + G + V  +G K
Sbjct: 188 DFAQFHPGGELGKRLLTTAGDVMRTDNLPVIPQSMPLGEAIIEVSRGKLG-LGVSLDGDK 246

Query: 263 LKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + G+IT+GDI R   K        +V D+M + PK +L  T ++   +++  + I  ++V
Sbjct: 247 VAGLITDGDIRRAMEKWQAEFFNKTVSDIMTRTPKTVLPTTKISEIQRIMNDNKIHTVLV 306

Query: 320 VDDCQKAIGIV 330
           VD   +  G+V
Sbjct: 307 VDANGRLKGVV 317


>gi|237744560|ref|ZP_04575041.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           7_1]
 gi|229431789|gb|EEO42001.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           7_1]
          Length = 323

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDTEIIEIAKNIYNTE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIIPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKANTSMEDIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNDENNVLVGIITEGDIRRALRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D  +  +G++   DLL+
Sbjct: 297 HQINVLPVFDKDE-FVGVIRIHDLLK 321


>gi|320355030|ref|YP_004196369.1| KpsF/GutQ family protein [Desulfobulbus propionicus DSM 2032]
 gi|320123532|gb|ADW19078.1| KpsF/GutQ family protein [Desulfobulbus propionicus DSM 2032]
          Length = 323

 Score =  303 bits (776), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 130/320 (40%), Positives = 182/320 (56%), Gaps = 7/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
           +V  A   +  E  GL ++  +L      +F  AV+ I A   R+V+TGIGKSG IG K+
Sbjct: 2   SVALAKEVLTIESEGLLAVRDNL----GEEFERAVDIIMACPSRLVVTGIGKSGLIGQKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+TL STGT SFF+H  EA HGDLGM+   D+++ +S+SG + EL  +L   +     +I
Sbjct: 58  AATLNSTGTRSFFLHPVEAMHGDLGMVAATDVVLAISYSGETSELNRLLSSLKERQTQII 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AI  +  S +A HA + L +    E+C  GLAPTTS    LA+GDALA+ALL  + F   
Sbjct: 118 AICGKLDSNLARHALVTLNVSIPREACSLGLAPTTSTTATLAMGDALAVALLNRKQFGAE 177

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF   HPGG LG  L V   +VM +G+ +P V     L  A+  L+EK  G V V D+  
Sbjct: 178 DFRRNHPGGSLGARLKVAIREVMLTGERVPSVTTEASLAMAVAELNEKNLGAVFVTDDQG 237

Query: 262 KLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L+GI+T+GDI R     K L   S+   M  +P  I  D +   A+ +++QH I+VL V
Sbjct: 238 VLRGIVTDGDIRRLLSAGKSLENTSLAAGMTHDPVAIASDLMAADALSIMQQHEITVLAV 297

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           V   ++  GI+H  +LL  G
Sbjct: 298 VTQERRLAGILHLHNLLGKG 317


>gi|329297314|ref|ZP_08254650.1| D-arabinose 5-phosphate isomerase [Plautia stali symbiont]
          Length = 290

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 119/283 (42%), Positives = 172/283 (60%), Gaps = 7/283 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL  L+  +  +    F  A + I A +G+VV+ GIGKSGHIG K+A+
Sbjct: 12  QAGKEVLRIEREGLEQLDQYINAD----FSRACKMIFACRGKVVVMGIGKSGHIGKKMAA 67

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTP+FFVH  EASHGDLGM++ +D++I +S SG S E+ A++   +R  + LI +
Sbjct: 68  TFASTGTPAFFVHPGEASHGDLGMVSTNDVVIAISNSGESGEILALIPVLKRQKVQLICL 127

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           TS  +S +   AD+ L +    E+CP GLAPT+S    L +GDALA+ALLE+R F++ DF
Sbjct: 128 TSRPESAMGRAADVHLCVKVPQEACPLGLAPTSSTTATLVMGDALAVALLEARGFTQEDF 187

Query: 205 YVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  SD+MHSGD IP V     L DA+  ++ K  G   +VD+  K+
Sbjct: 188 ALSHPGGALGRKMLLHVSDIMHSGDEIPHVTRDASLRDALLEITRKNLGLTVIVDDLMKI 247

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTV 304
           +GI T+GD+ R F    D  +  ++DVM +    +  + L   
Sbjct: 248 EGIFTDGDLRRIFDMGIDFQSARIQDVMTRGGIRVRPNLLAVD 290


>gi|167920279|ref|ZP_02507370.1| putative capsule expression protein [Burkholderia pseudomallei
           BCC215]
          Length = 311

 Score =  302 bits (775), Expect = 3e-80,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 170/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+SL + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALASLSARV----GDSFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATFASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   + D +P V    P ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMTVDGLPFVDERAPAIDVLRAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL   +  D+M  +P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAIEAYGDTLFRRAASDLMSADPAMVPLGTRVEDALLMMEARRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|256027345|ref|ZP_05441179.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
 gi|260494439|ref|ZP_05814569.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_33]
 gi|289765313|ref|ZP_06524691.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
 gi|260197601|gb|EEW95118.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_33]
 gi|289716868|gb|EFD80880.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D11]
          Length = 323

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 120/326 (36%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDTEIIEIAKNIYNTE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKTNTSMEDIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNDENNVLVGIITEGDIRRALRHKEEFFKLKAKDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D   K +G++   DLL+
Sbjct: 297 HQINVLPVFDKE-KFVGVIRIHDLLK 321


>gi|51244654|ref|YP_064538.1| polysialic acid capsule expression protein (KpsF) [Desulfotalea
           psychrophila LSv54]
 gi|50875691|emb|CAG35531.1| related to polysialic acid capsule expression protein (KpsF)
           [Desulfotalea psychrophila LSv54]
          Length = 327

 Score =  302 bits (775), Expect = 4e-80,   Method: Composition-based stats.
 Identities = 122/325 (37%), Positives = 189/325 (58%), Gaps = 7/325 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++K+ +++ A + +  E++GL+++  ++      +F  AVE I     R+VITGIGKSG 
Sbjct: 1   MVKHMSIEAAKKVLEIEEQGLAAVRENI----GEEFLAAVEAIVNCPTRLVITGIGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G K+++TL S GT SFF+H  EA HGDLGM+   D+++ +S+SG + EL  +L   +  
Sbjct: 57  VGQKISATLNSIGTSSFFLHPVEALHGDLGMVMATDVVLAISYSGETAELNGLLRSLKAR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I +T   KS +A  +DI L +    E+CP GLAPTTS    +A+GDAL + LL  +
Sbjct: 117 GNTIIGMTGGAKSTLAMASDIFLNIRIPAEACPLGLAPTTSTTATMALGDALGVVLLNRK 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F   DF   HPGG LG  L V  ++VM +G  +P+V      I A+  L+ K  G V V
Sbjct: 177 QFKAEDFRFNHPGGSLGERLKVKVAEVMITGSDMPMVAPDQDAIAALAELNSKNVGAVLV 236

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           V +   L GIIT+GD+ R     + L  L   D+M K+P  I +  L   A+ +++QH +
Sbjct: 237 VADTGMLAGIITDGDVRRYVLDAEALEGLCAADLMTKHPLTIGDGVLAADALSIMQQHEV 296

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VL VV +  + +G+++   LL  G
Sbjct: 297 TVLPVVSEEMRLVGLLNLHKLLGKG 321


>gi|311278344|ref|YP_003940575.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
 gi|308747539|gb|ADO47291.1| KpsF/GutQ family protein [Enterobacter cloacae SCF1]
          Length = 321

 Score =  302 bits (774), Expect = 5e-80,   Method: Composition-based stats.
 Identities = 120/325 (36%), Positives = 182/325 (56%), Gaps = 6/325 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +    ++++ E +      S L   L   F  A + I + KG++V++GIGKSGHI
Sbjct: 1   MSDFLLNAGRQTLLLELQE----ASRLPDRLDESFVRAAQTIISCKGKLVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T ASTGTP+FFVH AEA HGDLGM+   D+++ +S+SGS+ EL+ I+      S
Sbjct: 57  GKKLAATFASTGTPAFFVHPAEALHGDLGMLESQDVMLFISYSGSAKELELIIPRLEEKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +++S +A  A  VL +    E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKSQSPLALAAAAVLDISVAREACPMRLAPTSSTVNTLMLGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           FSE DF   HP G LG  L      +M   D +P V +   ++DA+  LS    G VAV 
Sbjct: 177 FSEEDFARSHPAGALGARLLNKVHHLMRKDDEVPKVTVDANVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D   ++ G+ T+GD+ R   +      +V + M      +        A ++L +H IS 
Sbjct: 237 DSAGQVSGVFTDGDLRRWLVRGGTLNDAVSEAMTTGGVTLQSQERAIDAKEILMRHKISA 296

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
             VVD+     G ++  +    GII
Sbjct: 297 APVVDENGYLTGAINLQNFYHAGII 321


>gi|315022664|gb|EFT35689.1| Arabinose 5-phosphate isomerase [Riemerella anatipestifer RA-YM]
 gi|325334966|gb|ADZ11240.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Riemerella anatipestifer RA-GD]
          Length = 319

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 126/326 (38%), Positives = 190/326 (58%), Gaps = 9/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A ++I  E   L  L  SL       F  AVE I    G++++ GIGKS H
Sbjct: 1   MKSSTLIDIAKKAIDTEIAELERLRDSLDN----SFLDAVELINKSSGKLIVVGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+ +TL STGTP+ F+HAAEA HGDLG++ ++D+++ +S SG+S E+  +  Y +++
Sbjct: 57  VGNKIVATLNSTGTPAQFLHAAEAIHGDLGVVQKNDVVLCISNSGNSPEIVNLAPYLKQY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  LI +T   KS +A H+DIVL    E E+CP+ LAPT+S  +Q+A+GDALA+ L+E  
Sbjct: 117 SAGLIGMTGNLKSKLAEHSDIVLNTFVEKEACPNKLAPTSSTTVQMALGDALAVCLMEIN 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F + DF   HPGG LG           S      V  G  + + I  +S    G V VV
Sbjct: 177 HFKDTDFAKFHPGGSLGKNLTAKVGQFLSSQKPQ-VSEGSSIKEVIISISASTHG-VTVV 234

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            EG+ +KGIIT+GD+ R    + D+  +  +D+M   PK I ++ L   AM++L+Q+NI 
Sbjct: 235 TEGETIKGIITDGDLRRMLMGNDDIKGIKAKDIMSLTPKTIDKEALAKEAMKILKQYNIG 294

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V D      GI+    LL  GI+
Sbjct: 295 QLIVTDKGNYF-GIIDLHTLLDEGIL 319


>gi|187251001|ref|YP_001875483.1| arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
 gi|186971161|gb|ACC98146.1| Arabinose-5-phosphate isomerase [Elusimicrobium minutum Pei191]
          Length = 329

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 120/320 (37%), Positives = 186/320 (58%), Gaps = 7/320 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +   + A   +  E   L+    S+ G     F  +V  I +I GRVV+ GIGKSG IG
Sbjct: 5   SDEIKKTAKEVLEVENNELAKSHKSIDG----NFIKSVNIINSISGRVVVLGIGKSGIIG 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTP+ F+H  EA HGDLGMI   D I+ LS+SG+++E+  ++    +  +
Sbjct: 61  RKIAATLASTGTPALFMHPVEALHGDLGMIQTSDAILALSFSGNTEEISKLIPLISKRKL 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I++T    S +A  +D+ + +    E+CP+ LAPT+S  + LA+GDALAI L+  ++F
Sbjct: 121 PVISMTGNENSKLAKLSDVHIKMHVSKEACPYNLAPTSSTTVMLALGDALAICLMRLKHF 180

Query: 200 SENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            + DF V HPGG LG  L    SD+M +G+  P+V     + DA+ ++++ + G  +VVD
Sbjct: 181 EKKDFAVFHPGGSLGKLLTNNVSDLMSTGNMNPVVTGDKLVKDALFVMTKTKAGATSVVD 240

Query: 259 EGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  KL G  T+GD+ R    D N     V  +M K P  +L+DT    A +++ +  I  
Sbjct: 241 KNGKLLGFFTDGDLRRALQADHNILDKKVSAIMTKKPTAVLQDTPAVEAAKIISERRIDN 300

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           + V+D   K +GI+   DL+
Sbjct: 301 VPVIDKKGKVVGILDKSDLI 320



 Score = 36.4 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 280 LNTLSVEDVMIK---NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L T +V D+M     NP V   D L+  A+ ++ +       VVD   K +G     DL 
Sbjct: 197 LLTNNVSDLMSTGNMNPVVTG-DKLVKDALFVMTKTKAGATSVVDKNGKLLGFFTDGDLR 255

Query: 337 RF 338
           R 
Sbjct: 256 RA 257


>gi|118594082|ref|ZP_01551429.1| carbohydrate isomerase, KpsF/GutQ family protein [Methylophilales
           bacterium HTCC2181]
 gi|118439860|gb|EAV46487.1| carbohydrate isomerase, KpsF/GutQ family protein [Methylophilales
           bacterium HTCC2181]
          Length = 324

 Score =  302 bits (773), Expect = 6e-80,   Method: Composition-based stats.
 Identities = 126/322 (39%), Positives = 190/322 (59%), Gaps = 6/322 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A   +  E   + +  +++       F  AV+ I   KGRVV++G+GKSGHI  K
Sbjct: 7   NILSNAKNVLKIEADEIYNALNNI----GESFVDAVKAIVGCKGRVVLSGMGKSGHIARK 62

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           ++STL+STGTP+FF+H  EASHGDLGMI + D+II+ S SG SDEL +IL   +R    +
Sbjct: 63  ISSTLSSTGTPAFFMHPGEASHGDLGMIVKSDVIILFSNSGQSDELISILPNIKRIGTKI 122

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T+   S +A  +DI + L    E+CP GL+PT S+ + LA+GDALAI +LE + FS 
Sbjct: 123 ISLTNNEASEIALQSDIHINLNVMKEACPLGLSPTASSTVALALGDALAICVLEEKGFSA 182

Query: 202 NDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F   HPGG LG    V   D+M  G++IP++     L DAI  +SEK+ G  +VVD  
Sbjct: 183 EEFKRSHPGGSLGKNSLVKVKDIMLIGNNIPMINFDALLGDAIKEISEKKVGFTSVVDSQ 242

Query: 261 QKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +K  GI T+GD+ R    + NT   + + M  NP ++ E+ L    + ++    I+  +V
Sbjct: 243 KKPIGIFTDGDLRRAILNNKNTNSPILECMTNNPIILHEEQLAIDVVNIMETSKITGFLV 302

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
            +     IGI++   LL+  +I
Sbjct: 303 TNKTGILIGILNLQVLLKQKVI 324


>gi|308273440|emb|CBX30042.1| Uncharacterized phosphosugar isomerase aq_1546 [uncultured
           Desulfobacterium sp.]
          Length = 325

 Score =  301 bits (772), Expect = 9e-80,   Method: Composition-based stats.
 Identities = 127/320 (39%), Positives = 190/320 (59%), Gaps = 7/320 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A+  +  E +G+ +L   +       F   VE I   KGR++++GIGKSG IG K+
Sbjct: 2   IIDEAIEVLKIEAQGILNLIDRINN----SFAEMVELIYKSKGRLIVSGIGKSGIIGRKI 57

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +TL STGT SFF+H  EA HGD+G++ +DD+++ LS SG +DEL  ++   R+    +I
Sbjct: 58  VATLNSTGTRSFFLHPVEAMHGDVGLVCKDDILLALSNSGETDELNILIPTIRKIGCKVI 117

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A T   KS +A H+DIV+ +  E E+CP GLAPTTS    LA+GDALA+ L+  + F  +
Sbjct: 118 AFTGNIKSTLAKHSDIVIDIGVEKEACPLGLAPTTSTTALLAMGDALAVTLINKKKFKSS 177

Query: 203 DFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           DF  +HPGG LG  L     D+M +G+++P V  G  +I+AI  +     G   V+++  
Sbjct: 178 DFKKVHPGGVLGQRLSEMVKDIMLTGEALPAVLKGVSMIEAIRKIDSGGLGVSLVLEKDG 237

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L GIIT+GDI R   K++N   L  EDVM +NP+    D+    A+ L+ +  I+VL +
Sbjct: 238 TLAGIITDGDIRRMIVKNMNVHELKAEDVMTQNPRTAKPDSPAYDALYLMEKFQITVLPI 297

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
            D   K +G++H  D+L  G
Sbjct: 298 TDPDNKILGVLHLHDILGKG 317


>gi|254303286|ref|ZP_04970644.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
 gi|148323478|gb|EDK88728.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium nucleatum subsp. polymorphum ATCC 10953]
          Length = 323

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 118/326 (36%), Positives = 184/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYETE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEIIAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M      + ++ + T A+ ++    
Sbjct: 237 MNDENNVLVGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D  +  +G++   DLL+
Sbjct: 297 HQINVLPVFDKDE-FVGVIRIHDLLK 321


>gi|281424281|ref|ZP_06255194.1| arabinose 5-phosphate isomerase [Prevotella oris F0302]
 gi|281401550|gb|EFB32381.1| arabinose 5-phosphate isomerase [Prevotella oris F0302]
          Length = 326

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 106/309 (34%), Positives = 184/309 (59%), Gaps = 7/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +   +++  E + +  L      +L   F  AVE +    G++++TG+GKSG++G+K+A+
Sbjct: 15  EWGAQALKEEAQAILELI----PQLDDNFTKAVEMMAHCHGKIIVTGVGKSGNVGAKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      +IP+I++
Sbjct: 71  TLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIPMVLHMNIPIISM 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S++A +++  + +  + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF
Sbjct: 131 TGNPNSLLAKYSNAHIKVYVKKEACPLNLAPTSSTTAALAMGDALAIALMQVRDFRPQDF 190

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG   +  +  +   + +P++     L +AI  +S+ + G    +    K+ 
Sbjct: 191 AQFHPGGELGKRLLTTAADVMRTNDLPVIPQEMHLGEAIICVSKGQLGLGVSLGADNKVI 250

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GDI R   +        +V D+M K PK++L  T +T   +++  H I  ++VVD
Sbjct: 251 GLITDGDIRRAMERWQAEFFDHTVSDIMTKTPKLVLPTTKITEIQRIMHNHKIHTVLVVD 310

Query: 322 DCQKAIGIV 330
           + +  +G+V
Sbjct: 311 EERHLLGVV 319


>gi|299140980|ref|ZP_07034118.1| arabinose 5-phosphate isomerase [Prevotella oris C735]
 gi|298577946|gb|EFI49814.1| arabinose 5-phosphate isomerase [Prevotella oris C735]
          Length = 326

 Score =  301 bits (771), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 105/309 (33%), Positives = 184/309 (59%), Gaps = 7/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +   +++  E + +  L      +L   F  AVE +    G++++TG+GKSG++G+K+A+
Sbjct: 15  EWGAQALKEEAQAILELI----PQLDDNFTKAVEMMAHCHGKIIVTGVGKSGNVGAKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      +IP+I++
Sbjct: 71  TLASTGTPAFFINPLDVYHGDLGVMTSDDVVLALSNSGQTDELLRFIPMVLHMNIPIISM 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S++A +++  + +  + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF
Sbjct: 131 TGNPNSLLAKYSNAHIKVYVKKEACPLNLAPTSSTTSALAMGDALAIALMQVRDFRPQDF 190

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG   +  +  +   + +P++     L +AI  +S+ + G    +    K+ 
Sbjct: 191 AQFHPGGELGKRLLTTAADVMRTNDLPVIPQEMHLGEAIICVSKGQLGLGVSLGADNKVI 250

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GDI R   +        +V D+M + PK++L  T +T   +++  H I  ++VVD
Sbjct: 251 GLITDGDIRRAMERWQAEFFDHTVSDIMTRTPKLVLPTTKITEIQRIMHNHKIHTVLVVD 310

Query: 322 DCQKAIGIV 330
           + +  +G+V
Sbjct: 311 EEKHLLGVV 319


>gi|256845181|ref|ZP_05550639.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium sp. 3_1_36A2]
 gi|256718740|gb|EEU32295.1| KpsF/GutQ family capsule synthesis sugar phosphate isomerase
           [Fusobacterium sp. 3_1_36A2]
          Length = 323

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 184/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYETE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEIIAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IAIT    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAITGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 VD-EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           ++ E   L GIITEGDI R     ++   L  +D+M      + ++ + T A+ ++    
Sbjct: 237 MNEENNILVGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D   K +G++   DLL+
Sbjct: 297 HQINVLPVFDKD-KFVGVIRIHDLLK 321


>gi|313205606|ref|YP_004044783.1| kpsf/gutq family protein [Riemerella anatipestifer DSM 15868]
 gi|312444922|gb|ADQ81277.1| KpsF/GutQ family protein [Riemerella anatipestifer DSM 15868]
          Length = 319

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 124/326 (38%), Positives = 187/326 (57%), Gaps = 9/326 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + +  A ++I  E   L  L  +L       F  AVE I    G++++ GIGKS H
Sbjct: 1   MKSTALIDIAKKAIDTEIAELERLRDNLNN----SFLDAVELINKSSGKLIVVGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+ +TL STGTP+ F+HAAEA HGDLG++ ++D+++ +S SG+S E+  +  Y +++
Sbjct: 57  VGNKIVATLNSTGTPAQFLHAAEAIHGDLGVVQKNDVVLCISNSGNSPEIVNLAPYLKQY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  LI +T   KS +A H+DIVL    E E+CP+ LAPT+S  +Q+A+GDALA+ L+E  
Sbjct: 117 SSGLIGMTGNLKSKLAEHSDIVLNTFVEKEACPNKLAPTSSTTVQMALGDALAVCLMEIN 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F + DF   HPGG LG           S      V     + + I  +S    G V VV
Sbjct: 177 HFKDTDFAKFHPGGSLGKNLTAKVGQFLSSQKPQ-VSEEASIKEVIISISASTHG-VTVV 234

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            EG  +KGIIT+GD+ R    + D+  +  +D+M   PK I ++ L   AM++L+Q+NI 
Sbjct: 235 TEGDAIKGIITDGDLRRMLMSNDDIKEIKAKDIMSLTPKTIDKEALAKEAMKILKQYNIG 294

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V D      GI+    LL  GI+
Sbjct: 295 QLIVTDKGNYF-GIIDLHTLLDEGIL 319


>gi|262068225|ref|ZP_06027837.1| arabinose 5-phosphate isomerase [Fusobacterium periodonticum ATCC
           33693]
 gi|291378093|gb|EFE85611.1| arabinose 5-phosphate isomerase [Fusobacterium periodonticum ATCC
           33693]
          Length = 323

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/326 (35%), Positives = 183/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYDTE---IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I +T    S +A  +D+ +    + E CP  LAP +S    L +GDA+A  L++ R
Sbjct: 117 GAFVIGMTGNINSRLAKASDLYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTKVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 VDEGQK-LKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           ++E    L GIITEGDI R     +   +L   D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNEDNSLLVGIITEGDIRRALSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D+    +GI+   DLL+
Sbjct: 297 HQINVLPVFDENN-FVGIIRIHDLLK 321


>gi|152979329|ref|YP_001344958.1| KpsF/GutQ family protein [Actinobacillus succinogenes 130Z]
 gi|150841052|gb|ABR75023.1| KpsF/GutQ family protein [Actinobacillus succinogenes 130Z]
          Length = 311

 Score =  301 bits (770), Expect = 1e-79,   Method: Composition-based stats.
 Identities = 116/299 (38%), Positives = 174/299 (58%), Gaps = 9/299 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A  ++  E++ L+ L  +L       F   +E I   +GR+ ++G+GKSG IG K
Sbjct: 2   DYLQNARETLAIEEQALAKLSRNLNRT----FDAVIELIIGCEGRIAVSGVGKSGLIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + ++LASTGTPSFF+H  EA HGDLGM+   D++I++S+SG SDE+  ++   + F   +
Sbjct: 58  IVASLASTGTPSFFLHPTEAFHGDLGMLKPSDVVILISYSGESDEVNKLIPSLKNFGNKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+TS   S +  HAD +L +  E E+CP+ LAPTTSA++ LA+GDAL +AL+ +RNF  
Sbjct: 118 VALTSNPTSTLGKHADFILDITVEREACPNNLAPTTSALVTLALGDALTVALIHARNFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C          +P+V       D +T+++E R G   V+ E Q
Sbjct: 178 IDFAKFHPGGSLGRRLLCRVKDQMQTR-LPVVAENTGFTDCLTVMNEGRMGVALVM-ERQ 235

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            LKGIIT+GDI R    +       S  D+M   PK I ++  L+ A   +++  I  L
Sbjct: 236 TLKGIITDGDIRRALTANGAETLHKSARDLMTGTPKTINQNEFLSAAESFMKEKKIHSL 294


>gi|167580751|ref|ZP_02373625.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           thailandensis TXDOH]
          Length = 311

 Score =  301 bits (770), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 110/315 (34%), Positives = 168/315 (53%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   + +  A +    E R L+ L + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNDYNYLDSARQVFDIESRALAGLSARV----DESFGDAVDAILRSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L    E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNYLVALTGNARSTLAQAAHSHLDAGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   +   +P V      ID + +++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMAAGDLPFVDERAQAIDVLQVMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GI+T+GD+ R      +TL      D+M K+P ++   T +  A+ ++    I
Sbjct: 237 RETG--FGIVTDGDVRRAVEAYGDTLFRRVASDLMSKDPAMVPLGTRVEDALLMMEMRRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVFDGED-VVGV 308


>gi|91201159|emb|CAJ74218.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 329

 Score =  300 bits (769), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/319 (36%), Positives = 188/319 (58%), Gaps = 9/319 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A + ++ E   + +    +       F  AV+ I    GRV +TG+GK+G IG K
Sbjct: 12  SDIDYAKKVLLLESEAIKNQIHRIDN----HFQKAVDIIFTCSGRVAVTGVGKAGIIGQK 67

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +++TLASTGTPS+++H++EA HGDLG I   D+++ LS SG + E+  +L + ++    +
Sbjct: 68  ISATLASTGTPSYWIHSSEARHGDLGKIVASDIVLALSNSGET-EVVLLLPFLKQMGTKI 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I++T  NKS +A H+D+VL +    E+CP G+AP++S    LAIGDA+A+ + + RN S+
Sbjct: 127 ISVTGNNKSSLALHSDVVLDIGNVEEACPLGIAPSSSTTAMLAIGDAIALTIFKKRNLSK 186

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDE 259
            ++   HPGG+LG   +    VM  G   P+     PL+D + I++E     G V++VD+
Sbjct: 187 EEYAFYHPGGELGRKLLPVEVVMRKGRENPVADEDMPLLDVLGIMTETKGNPGAVSIVDK 246

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L G  T+GD+ R   +  + L  ++++VM   PKVI    L+  A ++LR++ I  +
Sbjct: 247 NNRLTGFFTDGDLRRLLREGTSFLCKTIKEVMTPFPKVINNRCLVEEAYKILRENKIDQI 306

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VV+D    +GI    DLL
Sbjct: 307 PVVNDFHTPVGIFDVQDLL 325


>gi|237740270|ref|ZP_04570751.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           2_1_31]
 gi|229422287|gb|EEO37334.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           2_1_31]
          Length = 323

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 114/326 (34%), Positives = 184/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYDTE---IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    + E CP  LAP +S    L +GDA+A  L++ R
Sbjct: 117 GAFVIAMTGNINSRLAKASDLYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F+  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 DFTPQNFAMYHPGGSLGRKLLTKVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 VDEGQK-LKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           +++    L GIITEGDI R     +   +L   D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNDDNSLLVGIITEGDIRRALSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V DD    +G++   DLL+
Sbjct: 297 HQINVLPVFDDNN-FVGVIRIHDLLK 321


>gi|294782628|ref|ZP_06747954.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 1_1_41FAA]
 gi|294481269|gb|EFG29044.1| arabinose-5-phosphate isomerase [Fusobacterium sp. 1_1_41FAA]
          Length = 323

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 115/326 (35%), Positives = 183/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYDTE---IKSLEKRMN-KLSENFVKVVRKIFDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I +T    S +A  +D+ +    + E CP  LAP +S    L +GDA+A  L++ R
Sbjct: 117 GAFVIGMTGNINSRLAKASDLYINTHVDEEGCPLNLAPMSSTTNALVMGDAIAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTKVGNLMKTGEALALCKANTSMEDIVILMSEKKLGVVCV 236

Query: 257 VDEGQK-LKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           +++    L GIITEGDI R     +   +L   D+M  N   + ++ + T A+ ++    
Sbjct: 237 MNDDNSLLVGIITEGDIRRALSHKEKFFSLKASDIMTTNYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V DD    +G++   DLL+
Sbjct: 297 HQINVLPVFDDNN-FVGVIRIHDLLK 321


>gi|296328875|ref|ZP_06871386.1| KpsF/GutQ family sugar phosphate isomerase involved in capsule
           formation [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296153996|gb|EFG94803.1| KpsF/GutQ family sugar phosphate isomerase involved in capsule
           formation [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 323

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 119/326 (36%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDTEIIEIAKNIYDTE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I ++D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINQEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M      + +  + T A+ ++    
Sbjct: 237 MNDENNILVGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKGEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D+  K +G++   DLL+
Sbjct: 297 HQINVLPVFDND-KFVGVIRIHDLLK 321


>gi|261880669|ref|ZP_06007096.1| arabinose 5-phosphate isomerase [Prevotella bergensis DSM 17361]
 gi|270332622|gb|EFA43408.1| arabinose 5-phosphate isomerase [Prevotella bergensis DSM 17361]
          Length = 328

 Score =  300 bits (768), Expect = 2e-79,   Method: Composition-based stats.
 Identities = 108/313 (34%), Positives = 189/313 (60%), Gaps = 7/313 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + ++  A R +  E + +S L      +L   F  AVE +   +G++++TG+GKSG+IG+
Sbjct: 10  HQSIDYAKRCLTEEAQAISDLML----QLDDSFTRAVELMYHCRGKIIVTGVGKSGNIGA 65

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A TL+STGTP+FF++  +A HGDLG++T DD+++ LS SG +DEL   +      +IP
Sbjct: 66  KIAGTLSSTGTPAFFINPLDAYHGDLGVMTSDDVVLALSNSGQTDELLRFIPILLHMNIP 125

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ ++   +S++A ++ + + +  + E+CP  LAPT+S    L +GDALAIAL++ R+F 
Sbjct: 126 IVGMSRNPESLLAKYSTVHIKVWVDHEACPLNLAPTSSTTAALVMGDALAIALMQVRDFR 185

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF   HPGG+LG   +  ++ +   D +P++     L DAI  +S  + G    +D+ 
Sbjct: 186 PHDFAHFHPGGELGKRLLTTAEDVMHTDDLPIIPEEMHLGDAIIEVSRGKLGLGVSLDDR 245

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           + + GIIT+GDI R   +        +V D+M + PK++  +T +T   +++ ++ I  +
Sbjct: 246 RHVTGIITDGDIRRAMERWQAEFFNHTVADIMTREPKMVRLNTKITEIQRIMHKYKIHSV 305

Query: 318 MVVDDCQKAIGIV 330
           +V DD  +  GIV
Sbjct: 306 LVCDDRMEFRGIV 318


>gi|149199216|ref|ZP_01876254.1| arabinose-5-phosphate isomerase [Lentisphaera araneosa HTCC2155]
 gi|149137641|gb|EDM26056.1| arabinose-5-phosphate isomerase [Lentisphaera araneosa HTCC2155]
          Length = 309

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 113/312 (36%), Positives = 181/312 (58%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A      EK GL  +      +L   F  +V  I + KGR ++ G+GKSG IG K
Sbjct: 2   SILEIAKMVFEIEKDGLCHVSK----QLDVNFEQSVTSILSSKGRTIVCGMGKSGIIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+T+DD+ I +S SG +DE+  +L + +  S  +
Sbjct: 58  IAASFASTGTPSFFMHPGEAFHGDLGMVTKDDVFIAISNSGETDEVLKLLPFLKDNSNII 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T  + S +A +A   L +  E E+CP  LAPT S    LA+GDAL IAL++SR F  
Sbjct: 118 VAMTGNSNSTLAQNAHYHLNIGVEKEACPLQLAPTASTTATLAMGDALTIALMQSRKFKP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +          ++P+V     + D I +++E  +G   VV +  
Sbjct: 178 ENFARFHPGGSLGRKLLNKVQDEMQTINLPIVTDDLAVKDLIQVITECMYGLAIVV-KRN 236

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L G++T+GD+ R+F    K++   S +D+M  +PK I     +  A++ +  + I+ ++
Sbjct: 237 QLIGLVTDGDLRRSFEKFGKNVFDKSTKDIMSHSPKTISPLVSMQKAIEFMESYQINNII 296

Query: 319 VVDDCQKAIGIV 330
           V++D +  +GI+
Sbjct: 297 VIEDSE-VVGIL 307


>gi|220909564|ref|YP_002484875.1| KpsF/GutQ family protein [Cyanothece sp. PCC 7425]
 gi|219866175|gb|ACL46514.1| KpsF/GutQ family protein [Cyanothece sp. PCC 7425]
          Length = 333

 Score =  299 bits (767), Expect = 3e-79,   Method: Composition-based stats.
 Identities = 115/317 (36%), Positives = 180/317 (56%), Gaps = 10/317 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E   +      L+   S Q   A+  ++  +G+V++ G+GKSG +G K+A+T+ STG
Sbjct: 20  LKVEAEAIHKAACRLE---SDQVEQAIALLQNCQGKVIVLGMGKSGIVGQKIAATMTSTG 76

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           T + ++H ++A HGDLGM+   D+ I+LS SG ++EL  IL Y     +P+IAI     S
Sbjct: 77  TVAIYLHPSDALHGDLGMVAAADVAILLSNSGQTEELLQILPYLHHRQVPIIAIVGNLGS 136

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  AD+VL    + E+CP  LAPTTS  + LAIGDAL++AL +++N +   F + HP 
Sbjct: 137 PLARKADVVLDASVDREACPLNLAPTTSTTVALAIGDALSMALAKAKNLTPEAFAMNHPA 196

Query: 211 GKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G LG         +M SG + P V     L++ I  L+    G V VVD    L G+IT+
Sbjct: 197 GSLGRRLTLRVRHLMQSGAANPTVDHRASLVEIIAALTRGSCGAVNVVDPQGHLLGLITD 256

Query: 270 GDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NISVLMVVDDC 323
           GD+ R   +     L+T+    +M  NP V+  D L   A++L+ +    I+VL VVD  
Sbjct: 257 GDLRRVLQRMSLDRLDTVDCAMMMTPNPVVVEPDCLAYDALKLMEERASPIAVLPVVDQE 316

Query: 324 QKAIGIVHFLDLLRFGI 340
           ++++GIV   D+++ G+
Sbjct: 317 RRSVGIVRLHDIVQSGL 333


>gi|302345394|ref|YP_003813747.1| putative arabinose 5-phosphate isomerase [Prevotella melaninogenica
           ATCC 25845]
 gi|302148993|gb|ADK95255.1| putative arabinose 5-phosphate isomerase [Prevotella melaninogenica
           ATCC 25845]
          Length = 323

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 110/307 (35%), Positives = 182/307 (59%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I  E     +L      +L   F  AV  +    G+V++TG+GKSG+IG+K+A+TL
Sbjct: 15  ATQCIKEEAEATLNLI----NQLDENFDKAVSLMFHCTGKVIVTGVGKSGNIGAKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I +++
Sbjct: 71  SSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGMSA 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A ++   L +  E E+CP  LAPT+S    L +GDALAIAL+  RNF   DF  
Sbjct: 131 NPNSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAIALMRVRNFKPQDFAQ 190

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D +P++     L +AI  +S+ + G + V  +  K+ G+
Sbjct: 191 FHPGGELGKRLLTTAQDVMRSDELPIIPKDMHLGEAIIHVSKGKLG-LGVSLDNGKVIGL 249

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +V D+M + PK++L  T +T   Q+++Q+ +  ++V D+ 
Sbjct: 250 ITDGDIRRAMERWQAEFFDHTVSDIMTREPKIVLPTTKITEIQQIMQQNKVHTVLVCDEE 309

Query: 324 QKAIGIV 330
           +  +G+V
Sbjct: 310 RHFLGVV 316


>gi|281419797|ref|ZP_06250796.1| arabinose 5-phosphate isomerase [Prevotella copri DSM 18205]
 gi|281406173|gb|EFB36853.1| arabinose 5-phosphate isomerase [Prevotella copri DSM 18205]
          Length = 326

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 103/305 (33%), Positives = 180/305 (59%), Gaps = 7/305 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +++  E + +          L   F  AV+ +   +G++++TG+GKSGH+G+K+A+TLAS
Sbjct: 19  QALRDEAQAILD----QIPYLDDNFEKAVDMMYHCQGKIIVTGVGKSGHVGAKIAATLAS 74

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+F+++  +  HGDLG++T  D+++ LS SG +DEL   +      ++P+I+IT   
Sbjct: 75  TGTPAFYINPLDVYHGDLGVMTDKDVVLALSNSGQTDELLRFIPMVLHMNVPIISITGNP 134

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S++A +++  +T+  + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF   H
Sbjct: 135 DSLLAKYSNHHITVKVKKEACPLNLAPTSSTTAALAMGDALAIALMQVRHFKPRDFAQFH 194

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG+LG   +  ++ +   D +P++     L +AI  +S+ + G    +DE   + G+IT
Sbjct: 195 PGGELGKRLLTTAEDVMRSDDMPIIPKEMHLGEAIIHVSKGKLGLGISLDEDNHVIGLIT 254

Query: 269 EGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +GDI R   K        +V D+M   PK++   T ++   +++ ++ +  ++VVD    
Sbjct: 255 DGDIRRAMEKWQAEFFNKTVSDIMTTTPKMVTPKTKISEIQRIMHKYKVHTVLVVDKDNH 314

Query: 326 AIGIV 330
             GIV
Sbjct: 315 LKGIV 319


>gi|56552426|ref|YP_163265.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241761534|ref|ZP_04759621.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|260753899|ref|YP_003226792.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
 gi|56544000|gb|AAV90154.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ZM4]
 gi|241373842|gb|EER63375.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis ATCC
           10988]
 gi|258553262|gb|ACV76208.1| KpsF/GutQ family protein [Zymomonas mobilis subsp. mobilis NCIMB
           11163]
          Length = 336

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 119/322 (36%), Positives = 196/322 (60%), Gaps = 7/322 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  ++     I++E   +  L +S+       F  AV  +   +GR++++GIGKSGH+G 
Sbjct: 20  SQFIKHGRNVILSEATAMHHLAASI----GVDFAKAVSMLLETRGRIIVSGIGKSGHVGR 75

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTG+ +FF+H AEA+HGDLGM+   D++I +S+SG + EL  ++ YA+   +P
Sbjct: 76  KIAATLASTGSSAFFIHPAEAAHGDLGMMMNGDILIAISFSGRTRELLPMISYAQTLQVP 135

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I ITS+   V+   A + L LP+  E+CP  +APTTS  + +A+GDALA++++  R FS
Sbjct: 136 VIVITSQKGDVLPKEATLSLRLPELKEACPANIAPTTSTTLTMALGDALAVSMMRHRGFS 195

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            + F +LHPGG++G      S +MH G ++PLV    P+ D +  +S K FG   VV++ 
Sbjct: 196 RDAFKLLHPGGQIGFRLQSISRLMHEGAALPLVHCKEPMRDVLVTMSRKSFGSAGVVNDE 255

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+IT+GD+ R+    L   + EDVM  +P  +  D +   A+ L+ +  I+ L ++
Sbjct: 256 GELMGVITDGDLRRH-ADHLMESAAEDVMTSDPVTMRADDMAEDALILMTEKRITSLFIL 314

Query: 321 DDCQ--KAIGIVHFLDLLRFGI 340
                 + +G++H  DL R G+
Sbjct: 315 GKNGAKQPVGLLHIHDLTRMGL 336


>gi|254469051|ref|ZP_05082457.1| arabinose 5-phosphate isomerase [beta proteobacterium KB13]
 gi|207087861|gb|EDZ65144.1| arabinose 5-phosphate isomerase [beta proteobacterium KB13]
          Length = 326

 Score =  299 bits (766), Expect = 4e-79,   Method: Composition-based stats.
 Identities = 128/328 (39%), Positives = 196/328 (59%), Gaps = 7/328 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            + +K + +  A + +  E   +    ++ Q  +   F   + K+   KGR++++G+GKS
Sbjct: 4   MNDIKKTIIGSAKKVLDIESIEI----NNAQKFIDDNFADIIIKLSECKGRIILSGMGKS 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K+ASTL+STG+P+FF+H  EASHGDLGMIT DD++I LS SG SDE+  ++   +
Sbjct: 60  GHIAGKIASTLSSTGSPAFFMHPGEASHGDLGMITHDDIVIFLSNSGESDEIYNLIPSIK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++AITS  KS +A +AD  ++     E+CP GLAPT S+ + LAIGDA+A++L +
Sbjct: 120 RIGASIVAITSNEKSEIAKYADHHISSKVSTEACPLGLAPTASSALMLAIGDAIAVSLFQ 179

Query: 196 SRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            + F+  DF   HPGG LG        +VM S + +PLV     L   I +++EK+ G  
Sbjct: 180 LKGFTTEDFLKSHPGGALGKNKFIKIKEVMRSINEVPLVSPDDSLKQTIKLITEKKVG-Y 238

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           AVV    K  GI T+GD+ R+  K+ + +  +   M  NP  I E  L T A +L+ ++ 
Sbjct: 239 AVVANKLKYLGIFTDGDLRRSILKEASISDEISKWMSTNPFFINEHNLATSAAELMEKNK 298

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           IS L+VVD+    +G+++F DLL   +I
Sbjct: 299 ISSLVVVDNKDDLVGVINFQDLLINKVI 326


>gi|167563928|ref|ZP_02356844.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis EO147]
 gi|167571062|ref|ZP_02363936.1| carbohydrate isomerase, KpsF/GutQ family protein [Burkholderia
           oklahomensis C6786]
          Length = 311

 Score =  299 bits (765), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 166/315 (52%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  ++ +  A +    E R L+ L + +       F  AV+ I    GRVV+ G+GKSG 
Sbjct: 1   MNHHNYLDSARQVFDIESRALAGLSARV----DESFGDAVDAILHSSGRVVVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGTPSFF+H  EA HGDLGM+T  D  + +S+SG +DE+  ++ + +  
Sbjct: 57  IGRKIAATLASTGTPSFFMHPGEAYHGDLGMVTSADTFLAISYSGETDEVIKLIPFLKSN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              L+A+T   +S +A  A   L +  E E+CP  LAPT+S    LA+GDALA+ L+++R
Sbjct: 117 RNHLVALTGNARSTLARAAHSHLDVGVEQEACPLQLAPTSSTTAALAMGDALAVTLMKAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F   HPGG LG   +   D   +   +P V      ID +  ++  R G   V 
Sbjct: 177 GFRPENFARFHPGGSLGRRLLSKVDDEMAAHDLPFVDAHAQAIDVLQAMTRGRLGLAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            E     GIIT+GDI R        L      D+M  +P ++   T +  A+ L+    I
Sbjct: 237 CETG--WGIITDGDIRRAVETHGDALFRRVAADLMSSDPAMVRLGTRVEDALLLMETRRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V D     +G+
Sbjct: 295 NALLVSDGED-VVGV 308


>gi|19704238|ref|NP_603800.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
 gi|19714466|gb|AAL95099.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. nucleatum ATCC 25586]
          Length = 323

 Score =  298 bits (764), Expect = 6e-79,   Method: Composition-based stats.
 Identities = 117/326 (35%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDTEIIEIAKNIYDTE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ +
Sbjct: 117 GACIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLK 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + + + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEEIVILMSEKKLGVVCV 236

Query: 257 V-DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           + DE   L GIITEGDI R     ++   L  +D+M      + ++ + T A+ ++    
Sbjct: 237 MNDENNILIGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D+  K +G++   DLL+
Sbjct: 297 HQINVLPVFDND-KFVGVIRIHDLLK 321


>gi|317503416|ref|ZP_07961458.1| arabinose 5-phosphate isomerase [Prevotella salivae DSM 15606]
 gi|315665468|gb|EFV05093.1| arabinose 5-phosphate isomerase [Prevotella salivae DSM 15606]
          Length = 326

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 107/309 (34%), Positives = 188/309 (60%), Gaps = 7/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   +++  E + + +L      +L   F  AVE +    G++++TG+GKSG+IG+K+A+
Sbjct: 15  QWGCQALKEEAQAILNLI----PQLDENFTKAVEMMAHCHGKIIVTGVGKSGNIGAKIAA 70

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      +IP+I++
Sbjct: 71  TLASTGTPAFFINPLDVYHGDLGVMTPDDVVLALSNSGQTDELLRFIPMVLHMNIPIISM 130

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+ + S++A ++ + + +  + E+CP  LAPT+S    LA+GDALAIAL++ R+F   DF
Sbjct: 131 TANSNSLLAKYSKVHIKVYVKKEACPLNLAPTSSTTAALAMGDALAIALMQVRDFRPQDF 190

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG   +  +  +   + +P++     L +AI  +S+   G    + + +++ 
Sbjct: 191 AQFHPGGELGKRLLTTAADVMRTNDLPIIPQDMHLGEAIICVSKGLLGLGVSLGDDKRVI 250

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GDI R   +        +V D+M K PK +L  T +T   +++ +H I  ++VVD
Sbjct: 251 GLITDGDIRRAMERWQAKFFDHTVSDIMTKTPKFVLPTTKITEIQRIMHRHKIHTVLVVD 310

Query: 322 DCQKAIGIV 330
           + +  +G+V
Sbjct: 311 EEKHLLGVV 319


>gi|288803370|ref|ZP_06408803.1| arabinose-5-phosphate isomerase [Prevotella melaninogenica D18]
 gi|288334190|gb|EFC72632.1| arabinose-5-phosphate isomerase [Prevotella melaninogenica D18]
          Length = 316

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 110/307 (35%), Positives = 182/307 (59%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I  E     +L      +L   F  AV  +    G+V++TG+GKSG+IG+K+A+TL
Sbjct: 8   ATQCIKEEAEATLNLI----NQLDENFDKAVSLMFHCTGKVIVTGVGKSGNIGAKIAATL 63

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I +++
Sbjct: 64  SSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGMSA 123

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S++A ++   L +  E E+CP  LAPT+S    L +GDALAIAL+  RNF   DF  
Sbjct: 124 NPNSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAIALMRVRNFKPQDFAQ 183

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D +P++     L +AI  +S+ + G + V  +  K+ G+
Sbjct: 184 FHPGGELGKRLLTTAQDVMRSDELPIIPKDIHLGEAIIHVSKGKLG-LGVSLDNGKVIGL 242

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +V D+M + PK++L  T +T   Q+++Q+ +  ++V D+ 
Sbjct: 243 ITDGDIRRAMERWQAEFFDHTVSDIMTREPKIVLPTTKITEIQQIMQQNKVHTVLVCDEE 302

Query: 324 QKAIGIV 330
           +  +G+V
Sbjct: 303 RHFLGVV 309


>gi|119944389|ref|YP_942069.1| KpsF/GutQ family protein [Psychromonas ingrahamii 37]
 gi|119862993|gb|ABM02470.1| KpsF/GutQ family protein [Psychromonas ingrahamii 37]
          Length = 319

 Score =  298 bits (763), Expect = 8e-79,   Method: Composition-based stats.
 Identities = 117/316 (37%), Positives = 186/316 (58%), Gaps = 7/316 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +L  +  ++        + + L+S    L  E    +  A+  +K   GR+++ G+GKSG
Sbjct: 5   TLSTSQLIKEVRTVFDVQSQALTSHSQRLGDE----YLQALALMKNCTGRIIVCGMGKSG 60

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           HIG K+++TLAS GTPSF++H  EA HGDLGM+T++DL++++S+SG +DEL  I+   + 
Sbjct: 61  HIGKKISATLASLGTPSFYMHPGEAFHGDLGMVTQNDLLLLISYSGETDELLKIIPSIQH 120

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +I+IT    S +A ++D+VL    E E+CP+ LAPTTS  + L IGDALA  L   
Sbjct: 121 SGNKIISITGGLNSTLAKNSDVVLDASVEKETCPNNLAPTTSTTLSLVIGDALASTLTLE 180

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +NFS  DF   HPGG LG   +         + +PLV+    L DA+ +++E R G   V
Sbjct: 181 KNFSPMDFARFHPGGSLGKRLLTFVKNEMRTEKLPLVQAQTSLTDALMVMTETRTGLALV 240

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           ++EG  L+G+IT+GD+ R     + +   + + +M  +P  I  +  LT A +L+R+ +I
Sbjct: 241 MEEGN-LQGVITDGDVRRFLISGQSIADCTAQQLMNSSPCFISPNARLTEAEELMREKHI 299

Query: 315 SVLMVVDDCQKAIGIV 330
             L+V +D +K  GI+
Sbjct: 300 KWLVVSEDGKKLDGII 315


>gi|283788164|ref|YP_003368029.1| arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
 gi|282951618|emb|CBG91318.1| arabinose 5-phosphate isomerase [Citrobacter rodentium ICC168]
          Length = 293

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 115/277 (41%), Positives = 165/277 (59%), Gaps = 7/277 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +  +    F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIEREGLAELDQYINQD----FTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  + LI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTAQDVVIAISNSGESSEIAALIPVLKRLQVQLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESTMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+G+ IP V+    L DA+  ++ K  G   + DE  K+
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGEEIPHVRKEASLRDALLEITRKNLGMTVICDETMKI 249

Query: 264 KGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILE 298
            GI T+GD+ R F    D+  L + DVM      +  
Sbjct: 250 DGIFTDGDLRRVFDMGVDVRQLGIADVMTPGGIRVRP 286


>gi|325269085|ref|ZP_08135706.1| arabinose 5-phosphate isomerase [Prevotella multiformis DSM 16608]
 gi|324988706|gb|EGC20668.1| arabinose 5-phosphate isomerase [Prevotella multiformis DSM 16608]
          Length = 322

 Score =  298 bits (763), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 109/307 (35%), Positives = 180/307 (58%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++ I  E     +L      +L   F  AV  +    G+V++TG+GKSG+IG+K+A+TL
Sbjct: 14  AIQCIKEETEATLNLI----NQLDENFDKAVSLMYHCAGKVIVTGVGKSGNIGAKIAATL 69

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +      +IP+I +++
Sbjct: 70  SSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGMSA 129

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  RNF   DF  
Sbjct: 130 HPESLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRNFKPQDFAQ 189

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D +P++     L +AI  +S+ + G + V     K+ G+
Sbjct: 190 FHPGGELGKRLLTTAQDVMRSDDLPVIPKEMHLGEAIIHVSKGKLG-LGVSLADGKVIGL 248

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +V D+M + PK +L  T +T   +++ Q+ I  ++V D  
Sbjct: 249 ITDGDIRRAMERWQAEFFDHTVSDIMTREPKTVLPTTKITEIQRIMHQNKIHTVLVCDAG 308

Query: 324 QKAIGIV 330
           +  +G+V
Sbjct: 309 RHLLGVV 315


>gi|237741845|ref|ZP_04572326.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           4_1_13]
 gi|229429493|gb|EEO39705.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           4_1_13]
          Length = 323

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 116/326 (35%), Positives = 184/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDQEIIEIAKNIYNTE---IKSLELRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I  +D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINPEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLIKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 VD-EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           ++ E   L GIITEGDI R     ++   L  +D+M      + ++ + T A+ ++    
Sbjct: 237 MNEENNILVGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I++L V D  +  +G++   DLL+
Sbjct: 297 HQINILPVFDKDE-FVGVIRIHDLLK 321


>gi|34762344|ref|ZP_00143347.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
 gi|27887998|gb|EAA25062.1| Polysialic acid capsule expression protein kpsF [Fusobacterium
           nucleatum subsp. vincentii ATCC 49256]
          Length = 323

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 118/326 (36%), Positives = 185/326 (56%), Gaps = 11/326 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++    ++ A      E   + SLE  +  +LS  F   V KI   KG+VV+TGIGK+G 
Sbjct: 1   MLDTEIIEIAKNIYDTE---IKSLEMRMN-KLSENFVKVVRKIYDCKGKVVVTGIGKTGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++T ASTGT S F+++ E  HGDLG+I ++D+++ +S SG SDE+ AI+   +  
Sbjct: 57  IGKKISATFASTGTTSIFMNSTEGLHGDLGIINQEDIVLAISNSGESDEILAIMPAIKNI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T    S +A  +D+ +    E E CP  LAP +S    L +GDALA  L++ R
Sbjct: 117 GAYIIAMTGNINSRLAKASDLYINTHVEEEGCPINLAPMSSTTNALVMGDALAGCLMKLR 176

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFS  +F + HPGG LG        ++M +G+++ L K    + D + ++SEK+ G V V
Sbjct: 177 NFSPQNFAMYHPGGSLGRKLLTRVGNLMKTGEALALCKADTSMEDIVILMSEKKLGVVCV 236

Query: 257 VD-EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-- 311
           ++ E   L GIITEGDI R     ++   L  +D+M      + ++ + T A+ ++    
Sbjct: 237 MNEENNILVGIITEGDIRRALSHKEEFFKLKAKDIMTTKYTKVDKEEMATQALSIMEDRP 296

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H I+VL V D   K +G++   DLL+
Sbjct: 297 HQINVLPVFDKE-KFVGVIRIHDLLK 321


>gi|282891230|ref|ZP_06299733.1| hypothetical protein pah_c048o064 [Parachlamydia acanthamoebae str.
           Hall's coccus]
 gi|281498923|gb|EFB41239.1| hypothetical protein pah_c048o064 [Parachlamydia acanthamoebae str.
           Hall's coccus]
          Length = 319

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 114/318 (35%), Positives = 180/318 (56%), Gaps = 15/318 (4%)

Query: 38  LSSLESSLQGELSFQF--------HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L  L +  +  L + F           +E  +  KG ++ TG+GKSG++  K+A+T+ ST
Sbjct: 2   LKDLFAHAKNYLDYFFSHLDMQKSEKVLEICQNCKGVLIFTGVGKSGYVAKKVAATMTST 61

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GT + F+   +A HGD+G++T DD+ ++LS SG +DEL  ++   R     +I I S  K
Sbjct: 62  GTRALFLSPTDALHGDIGIVTSDDVFLILSKSGETDELLNLMPCLRNKGATIIGIVSNAK 121

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A   DI + LP + E CP  L PTTS  +Q+  GD LA+ L+  +NFS++ + + HP
Sbjct: 122 SRLAKACDIFIELPLQKELCPFDLVPTTSTTIQMIFGDVLAVELMTHKNFSKDQYGLNHP 181

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G +G  + V   D+M +G +IP+      L+D +  LS K+ GCV +VD    LKGI T
Sbjct: 182 AGTIGKRVNVKVKDLMLTGSAIPICYPENKLVDILVELSNKKCGCVLIVDNQFILKGIFT 241

Query: 269 EGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR---QHNISVLMVVDD 322
           +GD+ R   K+   +    +  +M + P++I  D L   AM+ +    +H I+VL VVDD
Sbjct: 242 DGDLRRALQKNGVQVLETPIGQIMSQKPQLITPDVLAFEAMRQMESDQKHPITVLPVVDD 301

Query: 323 CQKAIGIVHFLDLLRFGI 340
             K +G++   DL++ GI
Sbjct: 302 NHKVVGLIKMHDLVQSGI 319


>gi|317486881|ref|ZP_07945692.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
 gi|316921871|gb|EFV43146.1| KpsF/GutQ family sugar isomerase [Bilophila wadsworthia 3_1_6]
          Length = 341

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 112/322 (34%), Positives = 175/322 (54%), Gaps = 4/322 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA--IKGRVVITGIGKSGHIG 79
           + ++ A   +  E  GL+++   L      +    +         GRVV+TGIGKSG +G
Sbjct: 13  ALIKLAQDVLNTEIAGLAAVRDRLNARTPEKAPLVLALGLLAACTGRVVVTGIGKSGLVG 72

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KLA+T +STGTP+FF+H  E +HGDLG + +DD+II +S SG + EL AIL   +    
Sbjct: 73  RKLAATFSSTGTPAFFLHPVEGAHGDLGSLRKDDVIIAISNSGETAELNAILPALKSLGT 132

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            LIA+T    S +   AD+ L      E+CPHGLAPT S    LA+GDALA+ L++ ++F
Sbjct: 133 SLIAMTGREDSTLGRLADVTLHSGVPREACPHGLAPTASTTAVLALGDALAVCLMQLKSF 192

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF   HPGG LG         +   + +P +     L +A+  L + + G V ++D 
Sbjct: 193 TEKDFLRYHPGGSLGQRLKLNVSEVMRTEGLPQLSETSLLSEALRQLDQGKLGAVLLLDN 252

Query: 260 GQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI+T+GD+ R   +        V  VM  +P+   +   +   ++L+    I+VL
Sbjct: 253 EHRISGILTDGDVRRAVCRGTLNPEAPVSTVMTPSPRCGTQSDTVATLLELMESKAITVL 312

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            + D+ ++ +G+VH  DLL  G
Sbjct: 313 PIADEERRLLGMVHMHDLLGQG 334


>gi|255535741|ref|YP_003096112.1| Arabinose 5-phosphate isomerase [Flavobacteriaceae bacterium
           3519-10]
 gi|255341937|gb|ACU08050.1| Arabinose 5-phosphate isomerase [Flavobacteriaceae bacterium
           3519-10]
          Length = 319

 Score =  297 bits (762), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 121/325 (37%), Positives = 185/325 (56%), Gaps = 9/325 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     ++ A  +I  E   L +L++ L       F  AVE I + KG++++ GIGKS H
Sbjct: 1   MNNEEILRTARTAIETEISELENLKNRL----DASFLKAVEIINSSKGKLIVVGIGKSAH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +G+K+ +TL STGTPS F+HA+EA HGDLG+I + D+++ +S SG+S E+  +L Y + +
Sbjct: 57  VGNKIVATLNSTGTPSQFLHASEALHGDLGVIQKSDVVLCISNSGNSPEIVNLLTYLKGY 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  LI +T    S +A  +D+VL    E E+CP  LAPT+S  +Q+A+GD LA+ L+E  
Sbjct: 117 SSALIGMTGNLNSKLAEISDVVLNTSVEKEACPIKLAPTSSTTVQMALGDVLAVCLMEIN 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F E+DF   HPGG LG       +   S      V     + + I  +S    G   V 
Sbjct: 177 GFKESDFAKFHPGGALGKNLTAKVEQFLSPQKPQ-VSENAGIREIIISISASTHGITVVT 235

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+  ++ G+IT+GD+ R     ++L  ++  D+M KNPK + ++ L   AMQ+L+  NI 
Sbjct: 236 DDE-RITGVITDGDLRRMLISQQNLTKVTAVDIMTKNPKSVDKNALAKEAMQILKDKNIG 294

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
            L+V D+  K  GI+    LL  GI
Sbjct: 295 QLIVTDN-GKYSGIIDIHRLLDEGI 318


>gi|157825780|ref|YP_001493500.1| KpsF protein [Rickettsia akari str. Hartford]
 gi|157799738|gb|ABV74992.1| KpsF protein [Rickettsia akari str. Hartford]
          Length = 319

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 117/299 (39%), Positives = 182/299 (60%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +    L  L  ++  +    F   +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYQIIAKRVISSAASALEKLSKNIPED----FSRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR DL+I+LS SG + EL  ++ Y + FSI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRHDLVIMLSNSGETKELFNVVEYCKNFSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T +  S +A  +D +L +P+ PE+   G APT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMDKNSTLAKRSDFLLIVPEHPEASLIG-APTISSLIMLSLGDALITVIHEQRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M SGD IPLV       D I I+++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGIIGANLTKIKNLMRSGDEIPLVYEDTSFADTIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ R+ +  ++  +   VM KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 NQNLIGIITDGDLRRHINDQIHLKTASSVMTKNPIYISSEIFAKEALNLMQAKNITNIP 297


>gi|329888530|ref|ZP_08267128.1| sugar isomerase, KpsF/GutQ family protein [Brevundimonas diminuta
           ATCC 11568]
 gi|328847086|gb|EGF96648.1| sugar isomerase, KpsF/GutQ family protein [Brevundimonas diminuta
           ATCC 11568]
          Length = 376

 Score =  297 bits (761), Expect = 1e-78,   Method: Composition-based stats.
 Identities = 126/318 (39%), Positives = 189/318 (59%), Gaps = 6/318 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A   +      L +LE SL   +      A + I +  G VV+TG+GKSGHIG K+A+
Sbjct: 63  DRAREVVRLNIEALEALERSLDSSI----ARAADIILSRPGYVVVTGMGKSGHIGGKIAA 118

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT SFFVH AE SHGDLGM+  D  ++ LS SG S EL+  L +  R  IP+I +
Sbjct: 119 TLASTGTNSFFVHPAEMSHGDLGMLRPDTTLLALSNSGESRELRDPLIFCARNDIPVIGV 178

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +  H+ + LT+PK  E+CP+GLAPTTS +M LA+GDALA+ L++ R F+  DF
Sbjct: 179 TQRPQSFLGRHSAVCLTMPKVAEACPNGLAPTTSTLMSLAMGDALAMVLMDRRGFTREDF 238

Query: 205 YVLHPGGKLGTLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG       + M  +  +   V +       ++ ++E R G VAV+     L
Sbjct: 239 GLHHPGGALGMSLQTVREWMGDNAAAPASVPLDADFGAVVSAITEGRKGAVAVLAADGAL 298

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            G+IT+GD+ R   +D++ +  ED+M ++P  +  D+ ++  + LL  + IS L VVDD 
Sbjct: 299 AGMITDGDLRRALTRDVSAVRAEDIMSRSPITVDPDSRMSDVVDLLSANKISNLFVVDD- 357

Query: 324 QKAIGIVHFLDLLRFGII 341
           ++ + I+H  +L++ G +
Sbjct: 358 RRPVAIIHIAELMQAGYV 375


>gi|57168982|ref|ZP_00368111.1| KpsF protein Cj1443c [Campylobacter coli RM2228]
 gi|57019648|gb|EAL56337.1| KpsF protein Cj1443c [Campylobacter coli RM2228]
          Length = 280

 Score =  297 bits (761), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 107/276 (38%), Positives = 166/276 (60%), Gaps = 5/276 (1%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   KGR +++G+GKSGHIG+K+A+TLASTGTPSFF+H  EA HGDLGM+T DD++I +S
Sbjct: 1   MLHTKGRCIVSGMGKSGHIGAKIAATLASTGTPSFFIHPGEALHGDLGMLTPDDVLIAIS 60

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG ++E+  I+   ++  IPLIA+  +  S +    DI L +  + E+CP  LAP +S 
Sbjct: 61  NSGETEEILKIIPAIKKRKIPLIAMCGKKNSTLVKQGDIFLNISVKEEACPLQLAPMSST 120

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL 239
              L +GDALA AL+++RNF  +DF + HPGG LG   +     +    ++P+V      
Sbjct: 121 TATLVMGDALAAALMKARNFRPDDFALFHPGGSLGRKLLTRVSDLMVSKNLPIVHPDTEF 180

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVI 296
            D + +++  + G   VV E +KL GIIT+GD+ R      K       +++M  NPKV+
Sbjct: 181 NDLVDVMTSGKLGLCLVV-ENEKLVGIITDGDLRRALKANDKPRFDFKAKEIMSINPKVV 239

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             D + + A +++ ++ I   +VV    K +GI+  
Sbjct: 240 DADAMASEAEEIMLKYKIKE-IVVSKEDKVVGIIQL 274


>gi|313204155|ref|YP_004042812.1| kpsf/gutq family protein [Paludibacter propionicigenes WB4]
 gi|312443471|gb|ADQ79827.1| KpsF/GutQ family protein [Paludibacter propionicigenes WB4]
          Length = 320

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 122/321 (38%), Positives = 180/321 (56%), Gaps = 7/321 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q +      E   L  L   +  E++     AVE+I A KG++VI G+GK+G IG K
Sbjct: 2   DFIQRSKEIFNLEIAELQKLADKIGPEIN----QAVEQIYACKGKLVIMGVGKTGIIGHK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +AS+LASTGT S F++AAEA HGDLGMI  +D+++++S SG+S E+  ++   +     L
Sbjct: 58  IASSLASTGTSSIFINAAEAMHGDLGMINSNDIVMLISNSGNSAEILNVVAPLKEIGCSL 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T   +S +A    +VL +    E+CP GLAPTTS    L +GDAL I L+E R F  
Sbjct: 118 MAMTGNPRSALAKEVSLVLNVGISKEACPLGLAPTTSTTATLVMGDALTICLMERRGFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F + HPGG LG   +           IP V       D I  +S KR G   V ++ +
Sbjct: 178 ENFALYHPGGALGRRLISRVKDEM-FTDIPKVHETTIFKDIIYEVSNKRLGMTMVYNDAE 236

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +  GIIT+GDI R   K  +L  L+  ++M  + K I  D LLT A++L+  + I+ L V
Sbjct: 237 QAVGIITDGDIRRAIQKFDELKNLTAAEIMTHSFKRITPDELLTEALELMDINKITTLTV 296

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VD   + IGI+   +++ F I
Sbjct: 297 VDASDQVIGILSIHNIIDFRI 317


>gi|34580432|ref|ZP_00141912.1| kpsF protein [Rickettsia sibirica 246]
 gi|229586753|ref|YP_002845254.1| KpsF [Rickettsia africae ESF-5]
 gi|28261817|gb|EAA25321.1| kpsF protein [Rickettsia sibirica 246]
 gi|228021803|gb|ACP53511.1| KpsF [Rickettsia africae ESF-5]
          Length = 319

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 115/299 (38%), Positives = 181/299 (60%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSEASALEKLSENIPED----FNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+ PE+   G  PT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYPEASVIG-VPTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M SGD IPLV         I I+++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 NQNLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIP 297


>gi|297172130|gb|ADI23111.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured gamma proteobacterium HF0770_09E07]
          Length = 321

 Score =  297 bits (760), Expect = 2e-78,   Method: Composition-based stats.
 Identities = 117/327 (35%), Positives = 186/327 (56%), Gaps = 10/327 (3%)

Query: 19  MKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK +  Q  A ++ + E + + +   S      F      EKI   KG++ +TG+GKSGH
Sbjct: 1   MKKNIFQKEAKKAFLIELKEMEAFARS----KHFNVEELCEKIYNCKGKIFLTGVGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+++TL+STGTPSFF+H AEA HGDLGMI + D I+ +S SG S E+  ++   +  
Sbjct: 57  IANKISATLSSTGTPSFFIHPAEALHGDLGMIEKRDAILAISKSGESKEICDLIPAIKLR 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IPL +IT   KS +AC ++  + +    E+CP+ LAPT+S  + LA+GDA+AI+LL+++
Sbjct: 117 KIPLYSITENEKSTIACSSEAHILVKVAREACPNDLAPTSSTTVTLALGDAIAISLLKAK 176

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HPGGKLG        DVM       +VK    L D I  +S K+ G   +
Sbjct: 177 GFTSEDFAKSHPGGKLGKKLTLKVRDVMIPISKAAIVKENSSLKDLIYEVSSKKQGIALI 236

Query: 257 VDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             +  K+ G+ ++GD+ R   K  D+    V  VM K  K I  + L++ A + ++++ +
Sbjct: 237 K-KSNKITGVFSDGDLRRQLQKNVDIQKTKVGSVMKKKFKTIKNEELISEAAKRMKRYKV 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
             L+V ++    +GI+   D+L   ++
Sbjct: 296 YNLIV-EEKNNIVGILTMHDILEANVL 321


>gi|298530536|ref|ZP_07017938.1| KpsF/GutQ family protein [Desulfonatronospira thiodismutans ASO3-1]
 gi|298509910|gb|EFI33814.1| KpsF/GutQ family protein [Desulfonatronospira thiodismutans ASO3-1]
          Length = 327

 Score =  296 bits (759), Expect = 3e-78,   Method: Composition-based stats.
 Identities = 108/322 (33%), Positives = 181/322 (56%), Gaps = 6/322 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N  ++ A   +  E   + ++      +L   F  A+E++ A  GR+V+TG+GKSG IG
Sbjct: 4   NNDWLKKAREVLDIELEAIRAVRD----DLDEAFSSAMEEMSACSGRIVLTGVGKSGLIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T +STG+P+FF+H  E +HGD+GM+  +DL++ +S SG ++E+ +IL       I
Sbjct: 60  RKMAATFSSTGSPAFFLHPVEGAHGDMGMLRSEDLVVAISNSGETEEVNSILQSISSLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++A+T++  S +A  AD+V+ +    E+C  GLAPT+S    LA+GDA+AIAL++S++F
Sbjct: 120 RIVALTADTGSTMARLADVVVRVKVPREACSLGLAPTSSTTAVLAVGDAMAIALMQSKHF 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            + DF   HPGG LG         +    ++PL +    L +A+ ++++  FG V +   
Sbjct: 180 GKKDFQRYHPGGFLGQRLRQGIHRLMHTSALPLAREDESLENALEVMNQGGFGVVFITSG 239

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L G+IT+GD+ R    +   L       MI +P            + ++ +  I+VL
Sbjct: 240 DNRLAGVITDGDVRRMVCGNNWRLSDPAGLHMISSPVHANPGQSAASVLDVMEEKAITVL 299

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            +VD   +  G+VH  DLL  G
Sbjct: 300 PIVDHENRIKGLVHLHDLLGKG 321


>gi|150025302|ref|YP_001296128.1| arabinose-5-phosphate isomerase [Flavobacterium psychrophilum
           JIP02/86]
 gi|149771843|emb|CAL43317.1| Arabinose-5-phosphate isomerase [Flavobacterium psychrophilum
           JIP02/86]
          Length = 307

 Score =  296 bits (758), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 127/301 (42%), Positives = 176/301 (58%), Gaps = 4/301 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L   L+  F  AVE I   KGR+V+TGIGKS  I  K+ +T  STGTPS F+HAAEA 
Sbjct: 9   TKLVDYLTDDFAKAVEIIYQSKGRLVVTGIGKSAIIAQKMVATYNSTGTPSVFLHAAEAI 68

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+   D++I +S SG+S E+KA++   +RF   LIAIT    S +A  ++ VL  
Sbjct: 69  HGDLGMVQPGDIVICISKSGNSPEIKALIPILKRFGNILIAITGNMTSFLAKESNFVLNT 128

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             + ESCP  LAPT S   QL +GDAL + L+E +NF   DF   HPGG LG   +    
Sbjct: 129 TVDAESCPINLAPTNSTTAQLVMGDALGVCLMEMKNFKSEDFAKYHPGGALGKKLLLRVS 188

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--L 280
            M      P V     + + I  +SEKR G  AVV E +K+ GIIT+GDI R  + +   
Sbjct: 189 DMLDMSHKPTVSPDSSIKNVIFEISEKRLGVTAVV-ENKKIIGIITDGDIRRMLNNNDTF 247

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L+ +D+M KNPK I    ++  A  +L    I+ L VV++  +  G++H  D+L+ GI
Sbjct: 248 SHLTAKDIMTKNPKTIQYSAMVVDAFNILEDFAITQL-VVENQGEYTGVLHLHDILKEGI 306

Query: 341 I 341
           +
Sbjct: 307 V 307


>gi|238650253|ref|YP_002916104.1| arabinose-5-phosphate isomerase [Rickettsia peacockii str. Rustic]
 gi|238624351|gb|ACR47057.1| arabinose-5-phosphate isomerase [Rickettsia peacockii str. Rustic]
          Length = 319

 Score =  296 bits (757), Expect = 4e-78,   Method: Composition-based stats.
 Identities = 114/299 (38%), Positives = 180/299 (60%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSEASALEKLSENIPED----FNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+  E+   G  PT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYQEASVIG-VPTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M SGD IPLV         I I+++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 NQNLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIP 297


>gi|257468655|ref|ZP_05632749.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
 gi|317062912|ref|ZP_07927397.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
 gi|313688588|gb|EFS25423.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           ulcerans ATCC 49185]
          Length = 324

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 122/320 (38%), Positives = 183/320 (57%), Gaps = 11/320 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A     +E   L  +   +  E+       VE+I   +G+VV+TGIGKSG IG K
Sbjct: 6   DIINYAKEVFDSEIEELKIVRDKINREMID----VVEEILKSEGKVVVTGIGKSGLIGKK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT S F+++AE  HGDLGMI+++D++I +S SG+SDE+ AIL   ++    +
Sbjct: 62  IAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVIAISNSGNSDEIVAILPSIKKIGAKI 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T    S +   AD +L +  + E CP  LAP +S    L +GDALA  L++ R+F  
Sbjct: 122 VAMTGNRNSKLGREADYILNIGVKREGCPLNLAPMSSTTSTLVMGDALAAILIKKRDFKP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F + HPGG LG  L +   DVMH  + IPL      + D I  +++KR G V V++ G
Sbjct: 182 ENFALYHPGGSLGKRLLMKVRDVMHKDEMIPLCDKESVIDDVILTMTDKRLGAVCVMN-G 240

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISV 316
             + GIITEGDI R   +  +      +D+M +N   +  D++   A++L+   +  ISV
Sbjct: 241 DLMVGIITEGDIRRALKRREEFFGFKAKDIMTRNFTKVDSDSMAIDALELMENRESQISV 300

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L V D   K +G+V   DLL
Sbjct: 301 LPVFDKD-KLVGMVRVHDLL 319


>gi|71892233|ref|YP_277966.1| D-arabinose 5-phosphate isomerase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796339|gb|AAZ41090.1| putative phosphosugar binding protein [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 325

 Score =  296 bits (757), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 112/320 (35%), Positives = 173/320 (54%), Gaps = 6/320 (1%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A  ++  E          +   L      A   +    G+V ++GIGKSGHIG K+
Sbjct: 9   LLEYAKETLEIEINE----AQRMLDRLDESIVFACRMLLDCTGKVAVSGIGKSGHIGKKI 64

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A++LASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + E+  ++       IP+I
Sbjct: 65  AASLASTGTPAFFVHPAEALHGDLGMIGTQDVVMFISYSGRACEIITLMPLLADSGIPVI 124

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A T +  S +A  A  VL +  + E+CP  L+PT+S +  L +GDAL +AL+  R FS  
Sbjct: 125 AFTGDISSPLAKGATCVLNIKIQREACPMELSPTSSTVNTLMMGDALTMALMRHRGFSLE 184

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            F   HPGG+LG     C   +M +G++I  V     ++DA+  LS    G  AV D   
Sbjct: 185 QFARSHPGGRLGAQLLNCVHHLMRTGENISKVFWKVTVMDAMFELSRTGLGLTAVCDNHN 244

Query: 262 KLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           ++ G+ T+GD+ R   +  +    V+  M K    +L++   +VA++ L Q  I+   VV
Sbjct: 245 RVAGVFTDGDLRRWIVQGKSLNDPVDIAMTKPGYCMLKEWRASVALKALHQRKITAAPVV 304

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D     +G ++  DL + GI
Sbjct: 305 DKLGILVGSINMHDLHQAGI 324


>gi|157828535|ref|YP_001494777.1| kpsF protein [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165933251|ref|YP_001650040.1| arabinose-5-phosphate isomerase [Rickettsia rickettsii str. Iowa]
 gi|157801016|gb|ABV76269.1| kpsF protein [Rickettsia rickettsii str. 'Sheila Smith']
 gi|165908338|gb|ABY72634.1| arabinose-5-phosphate isomerase [Rickettsia rickettsii str. Iowa]
          Length = 319

 Score =  295 bits (756), Expect = 5e-78,   Method: Composition-based stats.
 Identities = 113/299 (37%), Positives = 180/299 (60%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSEASALEKLSENIPED----FNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+D++I+LS SG + EL  I+ Y +  SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDIVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+  E+   G  PT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYQEASVIG-VPTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G       ++M SGD IPLV         I I+++KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKIKNLMRSGDEIPLVYEDTSFAKTIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 NQNLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIP 297


>gi|15892584|ref|NP_360298.1| kpsF protein [Rickettsia conorii str. Malish 7]
 gi|15619749|gb|AAL03199.1| kpsF protein [Rickettsia conorii str. Malish 7]
          Length = 319

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 115/299 (38%), Positives = 179/299 (59%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +E   L  L  ++  +    F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSEASALEKLSENIPED----FNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG P+F++H AEASHGDLGM+TR+DL+I+LS SG + EL  I+ Y +  SI
Sbjct: 60  RKIAASFSSTGMPAFYLHPAEASHGDLGMVTRNDLVIMLSNSGETKELFNIIEYCKNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P+ PE+      PT S+++ L++GDAL   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLIVPEYPEA-SVIEVPTISSLIMLSLGDALMTVIHEKRGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF + HPGG +G        +M SGD IPLV         I I+S+KR GC  V D+
Sbjct: 179 TKDDFKIYHPGGTIGANLTKIKHLMRSGDEIPLVYEDTSFAKTIIIMSKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ R+ +  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 NQNLVGIITDGDLRRHINDQIHLKTASSIMTKNPIHISSEIFAKEALNLMKAKNITNIP 297


>gi|257125308|ref|YP_003163422.1| KpsF/GutQ family protein [Leptotrichia buccalis C-1013-b]
 gi|257049247|gb|ACV38431.1| KpsF/GutQ family protein [Leptotrichia buccalis C-1013-b]
          Length = 325

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 125/327 (38%), Positives = 185/327 (56%), Gaps = 14/327 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG-RVVITGIGKSGH 77
           M+   ++ A      E   L  L++ +       F   V  I  +K  +VV+TGIGKSG 
Sbjct: 1   MQIDIIKEAKSVFDIEITELEKLKNRI----GDSFQKLVNTIMELKNNKVVVTGIGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGT + F++AAEA HGDLG+I+  D++I +S SG+SDE+ +IL   R+ 
Sbjct: 57  IGEKIAATLASTGTTAVFLNAAEALHGDLGIISNGDVVIAISNSGNSDEILSILSPIRKI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              ++  T    S +  +ADI + +  E E+CP G AP +S    L  GDALA+ L++ +
Sbjct: 117 GGKIVGFTGNPNSTLGKYADITINVGVEKEACPLGQAPMSSTTSTLVTGDALAVCLMKLK 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NFSE+DF   HPGG LG  L +  SD+MH G+ +P+VK    + + +  L++K+ G V +
Sbjct: 177 NFSESDFAKYHPGGSLGKRLLLHVSDLMHIGEELPVVKKDEKIENVLMTLTKKKLGAVCI 236

Query: 257 VD---EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            D      KL GIITEGDI R     +        D+MI  P  I +D +   A+ L+  
Sbjct: 237 SDTGFGNGKLLGIITEGDIRRALEHKEKFFDYKASDIMISTPVTIEKDAMALDALHLMEN 296

Query: 312 HN--ISVLMVVDDCQKAIGIVHFLDLL 336
               ISVL VV++    +G++   DL+
Sbjct: 297 RKSQISVLPVVENGN-VVGLIRVHDLI 322


>gi|94268327|ref|ZP_01291143.1| KpsF/GutQ [delta proteobacterium MLMS-1]
 gi|93451652|gb|EAT02439.1| KpsF/GutQ [delta proteobacterium MLMS-1]
          Length = 311

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 115/312 (36%), Positives = 177/312 (56%), Gaps = 10/312 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +++ + A   +  E  G+ ++   +       F  AVE I A   R++++GIGKSG IG 
Sbjct: 2   STSREQAREVLRLEAEGIEAVRERI----DDAFERAVELIMACPTRLIVSGIGKSGIIGQ 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T+ STGTP+ F+H  EA HGDLG++   D+++ +S+SG + EL  +L   +     
Sbjct: 58  KIAATMNSTGTPALFLHPVEAMHGDLGIVDPRDVVLAISYSGETAELNLLLPTLKSRGAR 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T    S +A  AD VL +    E+CP GLAPT S    LA+GDALA+ LL  +NF+
Sbjct: 118 IIAMTGRPDSGLAAAADAVLNVAVPCEACPLGLAPTASTTATLALGDALAVVLLRRKNFA 177

Query: 201 ENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             DF   HPGG LG  L +  S+VM +G  IP V     L +A+  L+ K  G V V+  
Sbjct: 178 AGDFRRNHPGGSLGERLKIRVSEVMLTGAEIPTVAEDASLPEAVAELNRKNLGAVLVMAA 237

Query: 260 GQK-LKGIITEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             + + GI+T+GD+ R        D   LS+  VM ++PK I  + L   A+ ++++H +
Sbjct: 238 DGETMVGILTDGDLRRMVADGRQADFAELSLTAVMGRDPKCITPELLAADALSIMQRHEV 297

Query: 315 SVLMVVDDCQKA 326
           +VL V D  ++ 
Sbjct: 298 TVLPVTDARRRL 309


>gi|33152280|ref|NP_873633.1| arabinose-5-phosphate isomerase [Haemophilus ducreyi 35000HP]
 gi|33148503|gb|AAP96022.1| arabinose-5-phosphate isomerase [Haemophilus ducreyi 35000HP]
          Length = 311

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 116/314 (36%), Positives = 184/314 (58%), Gaps = 9/314 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A  ++    + +      LQ  L   F+ AVE I    GRVV+ GIGKSG +G K
Sbjct: 2   NYLTQATETLSLYSQAI----DRLQHNLDQHFNQAVEMILNCAGRVVVAGIGKSGLVGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSF++H  EA HGDLGM+   D+++++S SG +D++  +L   + F   +
Sbjct: 58  MVATFASTGTPSFYLHPTEAFHGDLGMLKAIDIVLLISNSGETDDVIKLLPSLKNFGNQI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A HAD+VL +  E E+CP+ LAPTTS ++ +A+GDALAIAL+++R+F  
Sbjct: 118 IAMTGNRHSTLAQHADLVLDISVEREACPNNLAPTTSTLVTMALGDALAIALIKARDFKA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           +DF   HPGG LG   +     +     +P+          +++++E R G   ++ +G+
Sbjct: 178 HDFARFHPGGSLGRKLLNRVKDVMQTK-LPITSPTADFSTILSVMNEGRMGLALIM-QGE 235

Query: 262 KLKGIITEGDIFRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L GIIT+GDI R   +   T    + E +M K PK IL+   L  A ++++  +I  L+
Sbjct: 236 QLCGIITDGDIRRTLAQFGATSLSKTAEQIMTKKPKTILDSVYLAKAEEMMKALHIHSLI 295

Query: 319 VVDDCQKAIGIVHF 332
            V+D  +  GI+ F
Sbjct: 296 AVNDIGQVSGILEF 309


>gi|253582905|ref|ZP_04860123.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           varium ATCC 27725]
 gi|251835111|gb|EES63654.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           varium ATCC 27725]
          Length = 324

 Score =  295 bits (756), Expect = 6e-78,   Method: Composition-based stats.
 Identities = 121/320 (37%), Positives = 183/320 (57%), Gaps = 11/320 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A     +E   L  +   +  E+       VE+I   +G+VV+TGIGKSG IG K
Sbjct: 6   DIINYAKEVFDSEIEELKIVRDKINREI----IEVVEEILKSEGKVVVTGIGKSGLIGKK 61

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TLASTGT S F+++AE  HGDLGMI+++D++I +S SG+SDE+ AIL   ++    +
Sbjct: 62  IAATLASTGTHSVFMNSAEGLHGDLGMISKEDVVIAISNSGNSDEIVAILPSIKKIGAKI 121

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T    S +   AD +L +  + E CP  LAP +S    L +GDALA  L++ R+F  
Sbjct: 122 VAMTGNRNSKLGREADYILNIGVKREGCPLNLAPMSSTTSTLVMGDALAAILIKKRDFKP 181

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F + HPGG LG  L +   DVMH  D +PL      + D I  +++KR G V V++ G
Sbjct: 182 ENFALYHPGGSLGKRLLMKVRDVMHKEDMLPLCDKESIIDDVILTMTDKRLGAVCVMN-G 240

Query: 261 QKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISV 316
             + GIITEGDI R   +  +      +D+M +N   +  +++   A++L+   +  ISV
Sbjct: 241 DLMVGIITEGDIRRALKRREEFFGFKAKDIMTRNFTKVDSESMAIDALELMENRESQISV 300

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L V D   K +G+V   DLL
Sbjct: 301 LPVFDKD-KLVGMVRVHDLL 319


>gi|225620913|ref|YP_002722171.1| D-arabinose-5-phosphate isomerase [Brachyspira hyodysenteriae WA1]
 gi|225215733|gb|ACN84467.1| D-arabinose-5-phosphate isomerase [Brachyspira hyodysenteriae WA1]
          Length = 320

 Score =  295 bits (755), Expect = 7e-78,   Method: Composition-based stats.
 Identities = 126/323 (39%), Positives = 186/323 (57%), Gaps = 11/323 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + ++    +++ E   L  L   L       F  AV+++  I+GRV+ +G+GKSGHI  K
Sbjct: 2   NIIERGKTTLLLESENLKMLSDKLDS----NFENAVKELFNIRGRVITSGVGKSGHIARK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            A+T ASTGTPSFFV   E  HGD GMIT++D  ++ S  G S E+  ++ +  R +IP 
Sbjct: 58  AAATFASTGTPSFFVDPNECMHGDFGMITKEDYCLLYSKGGESREIIELVNWLCRQNIPY 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT++  S ++ +A I L    + E+CP  LAPT S    LA+ DALA AL+E R F  
Sbjct: 118 IAITNDINSTLSKNAKITLLTHVKEEACPLRLAPTVSTTASLALSDALATALMELRGFRA 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF V HPGG LG        +MH+ +++P++     L DA+  + E + G   VVD+  
Sbjct: 178 EDFAVFHPGGSLGRQLAKVKSIMHT-ENLPIIFPNTSLQDALFKIIECKLGIAIVVDDKN 236

Query: 262 KLKGIITEGDIFRNFHKD-----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            LKGII +GD+ R   KD     + +  V+ +M  +PKVI EDTL+  A+ ++    I+ 
Sbjct: 237 ILKGIIVDGDLKRLLVKDDDIKNILSKEVKYIMNTSPKVIYEDTLIGEALHIME-GKITN 295

Query: 317 LMVVDDCQKAIGIVHFLDLLRFG 339
           L+VV++    IGIVH  D+L+  
Sbjct: 296 LVVVNNNNNPIGIVHIHDILKIK 318


>gi|218708281|ref|YP_002415902.1| putative D-arabinose 5-phosphate isomerase [Vibrio splendidus
           LGP32]
 gi|218321300|emb|CAV17250.1| putative D-arabinose 5-phosphate isomerase [Vibrio splendidus
           LGP32]
          Length = 310

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 108/312 (34%), Positives = 159/312 (50%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +  A   I  E  GL      +   L  +F  AV  I   KGR +I G+GKSG IG K
Sbjct: 3   SPIDIAREVIQTEIEGL----DYMAKRLGSEFEVAVNAILNTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLRDNDNFV 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT +  S +A ++   L +    E+CP  LAPT+S    L +GDAL +AL++ R F  
Sbjct: 119 IAITGKESSTLASNSHCHLNISVPKEACPLQLAPTSSTTATLVMGDALTVALMDVRGFKP 178

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +         D++P V         I  +S    G   V +   
Sbjct: 179 ENFARFHPGGSLGRRLLSKVRDEMFSDNLPSVCSDADFTSIIHKISSSHLGLTLV-NLNN 237

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   IIT+GD+ R      +D   L  +D+   NP  IL +  +  A +++    I+ L+
Sbjct: 238 ETLAIITDGDLRRAMELKGRDAFDLVAKDIASINPASILPECNIQEAYEVMENKGITSLI 297

Query: 319 VVDDCQKAIGIV 330
           V  +    +GI+
Sbjct: 298 V-RENNTVVGIL 308


>gi|254283770|ref|ZP_04958738.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR51-B]
 gi|219679973|gb|EED36322.1| arabinose 5-phosphate isomerase [gamma proteobacterium NOR51-B]
          Length = 324

 Score =  295 bits (755), Expect = 8e-78,   Method: Composition-based stats.
 Identities = 127/314 (40%), Positives = 181/314 (57%), Gaps = 7/314 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  V  A R+I  E+  + +L   +       F  A   +   +GRVV+TG+GKSGHI +
Sbjct: 5   DQLVASAKRTITMEQSAVGALVEHVGDT----FAHACRALLRTEGRVVVTGMGKSGHIAN 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+TLASTGTP+F+VH AEASHGD+GMIT  D +I LS SG++ E+  +L   +R ++ 
Sbjct: 61  KIAATLASTGTPAFYVHPAEASHGDMGMITARDAVIALSNSGTTPEVLTLLPLLKRLNVT 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+A+T    S +A  AD  L    E E+CP  LAPT+S    L +GDALAIALLE+R F+
Sbjct: 121 LVAMTGAAGSALAEAADFHLYAGAETEACPLDLAPTSSTTAALVLGDALAIALLEARGFT 180

Query: 201 ENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF   HPGG LG    +   DVM +   +P V  G  L +A+  ++ K  G   V D 
Sbjct: 181 ADDFAFSHPGGALGRKLLLKVEDVMSAAGDVPRVAPGATLAEALMEITAKGLGMTTVTDS 240

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +L GI T+GD+ R      D+N   ++ +M      + E TL   A+ ++ +H IS L
Sbjct: 241 TGRLLGIFTDGDLRRALEARPDINQTPIDSLMSTGGITVTEGTLAAEALGMMEEHRISAL 300

Query: 318 MVVDDCQKAIGIVH 331
           +V D     IG+VH
Sbjct: 301 VVTDRNGAVIGVVH 314


>gi|291276276|ref|YP_003516048.1| KpsF protein [Helicobacter mustelae 12198]
 gi|290963470|emb|CBG39300.1| KpsF protein [Helicobacter mustelae 12198]
          Length = 322

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 110/319 (34%), Positives = 185/319 (57%), Gaps = 9/319 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A + +  E + L S++++        F   V+ I  + G++++TG+GKSG IG+K+A+
Sbjct: 8   QIAKKVLDDEAQELLSIDTT-----RIDFPHIVKTILQMSGKLIVTGVGKSGLIGAKIAA 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGTPSFF+H  +A HGDLGMI ++D+I+ +S+SG SDEL +IL + +  S  +I +
Sbjct: 63  TLASTGTPSFFIHPTDAMHGDLGMIGKEDVILAISYSGESDELISILPHLKHQSHAIITM 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + + +S ++   D  + +    E+CP   APT+S  + LA+GDALA+ L+ +R+FS+ DF
Sbjct: 123 SKDAQSSLSKMGDFFIPIAVSKEACPINAAPTSSTTLTLALGDALAVCLMHARDFSKQDF 182

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG         +    ++PL+    PL +AI  +SE R G   ++ E  +L 
Sbjct: 183 AYFHPGGSLGKRLFVKVKDLMQTQNLPLIPPEMPLKEAIIKMSESRLGSAILI-EDDRLY 241

Query: 265 GIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLT-VAMQLLRQHNISVLMVVD 321
           G++++GD+ R   +    L    +     +PK      LL   A++ + ++ I +L++ D
Sbjct: 242 GVLSDGDLRRAMMQKDFNLESPAKHYATLSPKYCDNPLLLACEALEFIEENKIQLLIITD 301

Query: 322 DCQKAIGIVHFLDLLRFGI 340
             +  +G +H   L+  GI
Sbjct: 302 PAKHILGAIHLHTLISAGI 320


>gi|257463606|ref|ZP_05627997.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
 gi|317061160|ref|ZP_07925645.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
 gi|313686836|gb|EFS23671.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           D12]
          Length = 322

 Score =  294 bits (754), Expect = 1e-77,   Method: Composition-based stats.
 Identities = 120/327 (36%), Positives = 179/327 (54%), Gaps = 11/327 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L     +  A   I  E +GL  L+ S+  EL      A + I   +G+++ITGIGK+G 
Sbjct: 2   LEDQEMIAVAQGIIDTEIQGLEKLKKSMGREL----IEAAKTIYESRGKLIITGIGKTGA 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TL+STGT + F+++ E  HGDLGM+  +D++I +S SG SDE+  I+   +  
Sbjct: 58  IGRKIAATLSSTGTTTIFMNSTEGLHGDLGMVNPEDIVIGISNSGESDEILHIIPAIKNI 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              + A+T    S +A  A+IVL    E E CP  LAP  S    LA+GDALA  L+  R
Sbjct: 118 GAKVFAMTGNPNSRLAQEAEIVLFCGVESEGCPLNLAPMASTTSALALGDALAGVLMRMR 177

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NF   +F + HPGG LG        ++M +G+ + L      + D I  ++EKR G + V
Sbjct: 178 NFQPQNFAMYHPGGSLGRRLLSRVKNLMKTGEDLALCSPNTKMKDVILKMNEKRLGILCV 237

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--H 312
           + E +KL GIITEGDI R     ++  T   E++M K  K + +D L   A+  + +  +
Sbjct: 238 M-ENEKLVGIITEGDIRRALSREEEFFTFRAEEIMTKKYKKVEQDMLANEALSYMEEGKY 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFG 339
            ISV+ V    +  +G+V   DLL+  
Sbjct: 297 QISVMPVF-HEETFVGVVRIHDLLKLK 322


>gi|327313442|ref|YP_004328879.1| arabinose 5-phosphate isomerase [Prevotella denticola F0289]
 gi|326945932|gb|AEA21817.1| arabinose 5-phosphate isomerase [Prevotella denticola F0289]
          Length = 323

 Score =  294 bits (752), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 108/307 (35%), Positives = 180/307 (58%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++ I  E         +L  +L   F  AV  +    G+V++TG+GKSG+IG+K+A+TL
Sbjct: 15  AIQCIKEETDA----AFNLINQLDENFDRAVSLMYHCTGKVIVTGVGKSGNIGAKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +       IP+I +++
Sbjct: 71  SSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMDIPIIGMSA 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  R+F   DF  
Sbjct: 131 NPQSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRDFKPQDFAQ 190

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D +P++     L +AI  +S+ + G + V     K+ G+
Sbjct: 191 FHPGGELGKRLLTTAQDVMRSDDLPVIPEKMHLGEAIIHVSKGKLG-LGVSLSDGKVVGL 249

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +V D+M + PK++L  T +T   +++ Q+ I  ++V D  
Sbjct: 250 ITDGDIRRAMERWQAEFFDHTVSDIMTREPKMVLPATKITEIQRIMHQNKIHTVLVCDAE 309

Query: 324 QKAIGIV 330
           +  +G+V
Sbjct: 310 RHLLGVV 316


>gi|254420473|ref|ZP_05034197.1| sugar isomerase, KpsF/GutQ family [Brevundimonas sp. BAL3]
 gi|196186650|gb|EDX81626.1| sugar isomerase, KpsF/GutQ family [Brevundimonas sp. BAL3]
          Length = 330

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 128/338 (37%), Positives = 191/338 (56%), Gaps = 10/338 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
            +     +    + M +     A   +      L +LE S+          AV+ I +  
Sbjct: 1   MTEIAHSSPDDIAAMTDR----ARDVMRLNIEALEALERSI----DVSMARAVDVIMSRP 52

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G V++TG+GKSGHIG K+A+TLASTGT +FFVH AE SHGDLGM+  D  ++ +S SG S
Sbjct: 53  GYVIVTGMGKSGHIGGKIAATLASTGTSAFFVHPAEMSHGDLGMLRPDVTVLAISNSGES 112

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            EL+  L +  R  IP+IAIT    S +  +A + LT+PK  E+CP+GLAPTTS +M LA
Sbjct: 113 RELRDPLIFCHRNGIPVIAITQRPASFLGRNAAVCLTMPKVAEACPNGLAPTTSTLMTLA 172

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM-HSGDSIPLVKIGCPLIDAI 243
           +GDALA+ L++ R FS  DF + HPGG LG       + M  +  +   V +     + +
Sbjct: 173 LGDALAMVLMDRRAFSAMDFGLHHPGGALGMSLQSVREWMGDNAAAPASVPLNANFSEVV 232

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + ++E R G VAV+D    L GI+T+GD+ R F +D   L+  D+M  NP  +  D  ++
Sbjct: 233 SAITEGRKGAVAVLDLDGTLAGIVTDGDLRRAFQRDTTNLTAADIMGPNPITVDPDARMS 292

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             + LL  + I+ L VV++  +   IVH  +L++ G +
Sbjct: 293 DVVDLLTANKIANLFVVEE-GRPTAIVHIAELMQAGYV 329


>gi|294055879|ref|YP_003549537.1| KpsF/GutQ family protein [Coraliomargarita akajimensis DSM 45221]
 gi|293615212|gb|ADE55367.1| KpsF/GutQ family protein [Coraliomargarita akajimensis DSM 45221]
          Length = 328

 Score =  293 bits (751), Expect = 2e-77,   Method: Composition-based stats.
 Identities = 114/331 (34%), Positives = 181/331 (54%), Gaps = 10/331 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +    S ++   ++++ E + + +    L       F  A++ I     ++VI GIGKS
Sbjct: 1   MAETGTSRLESGRKAMLDEAQAIQAAADRL----DASFEQAIDIILNAPRKIVICGIGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG KLA+T +S G P+ F+HAAEA HGDLG+    D  IVLS SGS+ E+  ++   +
Sbjct: 57  GHIGVKLAATFSSCGVPAVFLHAAEAIHGDLGVYRPGDPTIVLSKSGSTAEVLRLMPMFK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF  P+IAI    +S +A  AD+VL    E E+ P  L PT+S+ + LAIGDALA A ++
Sbjct: 117 RFDSPVIAIVGNVESPIAKGADVVLDGSVESEADPLNLMPTSSSTVSLAIGDALAAASVQ 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R+F+  +F   HPGG+LG    +   DVMH+ + +        L + +  +++   G  
Sbjct: 177 ARDFTPEEFATYHPGGQLGRNLLLTVGDVMHAAEGVATATGDETLREVVMRMTQYPLGAA 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            +VD   K+ G++T+GD+ R   K  D+  L V   M  +P     D  L  A++++   
Sbjct: 237 CIVDASGKMTGLLTDGDVRRVLSKEGDILNLQVAACMTSSPVYTKPDVPLGDALKIMEDR 296

Query: 313 --NISVLMVVDDC-QKAIGIVHFLDLLRFGI 340
              ISVL VVD+   + +G++   D  + G+
Sbjct: 297 SSQISVLPVVDEDTMQLLGLLRLHDAYQPGL 327


>gi|56751818|ref|YP_172519.1| hypothetical protein syc1809_d [Synechococcus elongatus PCC 6301]
 gi|81301100|ref|YP_401308.1| KpsF/GutQ family protein [Synechococcus elongatus PCC 7942]
 gi|56686777|dbj|BAD79999.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169981|gb|ABB58321.1| KpsF/GutQ family protein [Synechococcus elongatus PCC 7942]
          Length = 323

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 113/320 (35%), Positives = 173/320 (54%), Gaps = 10/320 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + +  E   +         E       A + I    G+VV++G+GKSG I  K+ +TL 
Sbjct: 7   RQILDLEAEAIQRAAERADAEAFAN---ATQLIANCSGKVVLSGVGKSGIIARKITATLL 63

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           S GT S F+H  +A HGDLG++T  D++++LS SG +DEL A+L + +R  +P+IAI   
Sbjct: 64  SIGTLSAFLHPCDALHGDLGIVTEQDVVVMLSNSGETDELLAMLPHLQRRQVPIIAIVGN 123

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +S +A  A  VL    + E+CP  LAPT S  + LAIGDALA  +++ R+ +   F   
Sbjct: 124 MRSTLARVAAAVLDASVDREACPLNLAPTASTTVALAIGDALAAQVMDYRSVTSEQFAFN 183

Query: 208 HPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HP G+LG        DVMH G+ +PL+      ++ +T +S    G V +V+   +L G+
Sbjct: 184 HPAGRLGKRLTLKVVDVMHQGEELPLLPPEARFVEVVTAISRGGLGAVPIVEADGRLLGL 243

Query: 267 ITEGDIFRNFHK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NISVLMVV 320
           IT+GD+ R   +     L+ ++  + M   P  +  D L   A+ L+      ISVL VV
Sbjct: 244 ITDGDLRRLLEQTSPAKLDQITAAEFMTPQPIAVEGDLLAYDALHLMENRPSQISVLPVV 303

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D  Q+ +G+V   DL+R GI
Sbjct: 304 DAAQRCLGLVRIHDLIRSGI 323


>gi|1170710|sp|P42502|KPSF1_ECOLX RecName: Full=Polysialic acid capsule expression protein kpsF
 gi|455424|gb|AAB51623.1| KpsF [Escherichia coli]
          Length = 317

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 117/304 (38%), Positives = 172/304 (56%), Gaps = 8/304 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +    +++  E   L +L   L    S Q+   +  I   KG V+++G+GKSGH+G K+
Sbjct: 18  LITSVRQTLAEEGARLQNLSKQLD---SGQYQRVLNLIMNCKGHVILSGMGKSGHVGRKM 74

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++TLASTGTPSFF+H AEA HGDLGMIT  DL+I++S SG +DE+  ++   + F   +I
Sbjct: 75  SATLASTGTPSFFIHPAEAFHGDLGMITPYDLLILISASGETDEILKLVPSLKNFGNRII 134

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AIT+   S +A +AD VL L    E+CP+ LAPTTS  + +AIGDALAIA++  R F  N
Sbjct: 135 AITNNGNSTLAKNADAVLELHMANETCPNNLAPTTSTTLTMAIGDALAIAMIRQRKFMPN 194

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG   +     +   D    V++       I  ++    G V V D    
Sbjct: 195 DFARYHPGGSLGRRLLTRVADVMQHDVPA-VQLDASFKTVIQRITSGCQGMVMVEDAEGG 253

Query: 263 LKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GIIT+GD+ R   K+  L + +   +M + P  + EDT++  A + +++     L V+
Sbjct: 254 LAGIITDGDLRRFMEKEDSLTSATAAQMMTREPLTLPEDTMIIEAEEKMQKDK--CLNVI 311

Query: 321 DDCQ 324
            D Q
Sbjct: 312 GDQQ 315


>gi|59710786|ref|YP_203562.1| arabinose-5-phosphate isomerase [Vibrio fischeri ES114]
 gi|59478887|gb|AAW84674.1| arabinose-5-phosphate isomerase [Vibrio fischeri ES114]
          Length = 310

 Score =  292 bits (749), Expect = 4e-77,   Method: Composition-based stats.
 Identities = 109/312 (34%), Positives = 162/312 (51%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S++  A + I  E  GL      +   L  +F  A+  I   KGR +I G+GKSG IG K
Sbjct: 3   SSIDIAKQVIQTEIEGL----DYMAKRLGSEFEVAINAIINTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDVFIAISNSGETDEVLKLLPFLRDNGNFV 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT +  S +A ++   L +    E+CP  LAPT+S    L +GDAL +AL++ R F  
Sbjct: 119 IAITGKENSTLATNSHCHLDISVPKEACPLQLAPTSSTTATLVMGDALTVALMDVREFQP 178

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +         D+IP V         I  +S    G   V  +  
Sbjct: 179 ENFARFHPGGSLGRRLLSKVQDEMFSDNIPSVASDADFTSIIHKISSSHLGLTLVNLKDD 238

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L  IIT+GD+ R      +D   L  +D+   NP  I  ++ +  A +++    I+ L+
Sbjct: 239 SLA-IITDGDLRRAMESKGRDAFDLVAKDIASINPASISPESNIQKAYEIMESKGITSLI 297

Query: 319 VVDDCQKAIGIV 330
           VV +    +GI+
Sbjct: 298 VV-ESNSVVGIL 308


>gi|118474673|ref|YP_892917.1| KpsF/GutQ [Campylobacter fetus subsp. fetus 82-40]
 gi|118413899|gb|ABK82319.1| KpsF/GutQ [Campylobacter fetus subsp. fetus 82-40]
          Length = 326

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 112/325 (34%), Positives = 186/325 (57%), Gaps = 11/325 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   +  A   +  E   L          L F+F  AV    + KG+++I+G+GKSG +G
Sbjct: 9   KMDILSIAKEVLSLEADEL----KRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVG 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTPSFF+H  EA HGDLGMI+++D ++ +S+SG S EL  IL + ++  I
Sbjct: 65  AKIAATLASTGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGI 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I + +++ S +   +D  ++L    E+CP G APT S  + LA+GDALA+ L++ + F
Sbjct: 125 KIIGM-AKSGSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            + DF +LHPGG LG         +   D +P+V     L  AI  ++  + G V + ++
Sbjct: 184 KKEDFAMLHPGGSLGKRLYLKVKDVMRKDELPIVSDDVSLKFAINSMTHGKLGTVLLTNK 243

Query: 260 GQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNIS 315
              L  ++++GD+ R       ++N  +++    KNPKV+  E+ L   A++L+ ++ I 
Sbjct: 244 NGLLVAVLSDGDLRRALGNENFNINDQAIK-FATKNPKVLEDENMLAYDALKLIEEYKIQ 302

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L++    +K IG +H  DL   G+
Sbjct: 303 ILIIT-KDKKPIGALHIHDLTSLGL 326


>gi|325856615|ref|ZP_08172253.1| arabinose 5-phosphate isomerase [Prevotella denticola CRIS 18C-A]
 gi|325483329|gb|EGC86304.1| arabinose 5-phosphate isomerase [Prevotella denticola CRIS 18C-A]
          Length = 323

 Score =  292 bits (747), Expect = 6e-77,   Method: Composition-based stats.
 Identities = 108/307 (35%), Positives = 180/307 (58%), Gaps = 8/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++ I  E         +L  +L   F  AV  +    G+V++TG+GKSG+IG+K+A+TL
Sbjct: 15  AIQCIKEETDA----AFNLIKQLDENFDRAVSLMYHCTGKVIVTGVGKSGNIGAKIAATL 70

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +STGTP+FFV+  +  HGDLG++T+DD+++ LS SG +DEL   +       IP+I +++
Sbjct: 71  SSTGTPAFFVNPLDVYHGDLGVMTKDDVVLALSNSGQTDELLRFIPMVLHMDIPIIGMSA 130

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
             +S++A ++   L +  E E+CP  LAPT+S    L +GDALA+AL+  R+F   DF  
Sbjct: 131 NPQSLLAKYSTAHLKVWVEKEACPLNLAPTSSTTAALVMGDALAVALMRVRDFKPQDFAQ 190

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG+LG   +  +  +   D +P++     L +AI  +S+ + G + V     K+ G+
Sbjct: 191 FHPGGELGKRLLTTAQDVMRSDDLPVIPEKMHLGEAIIHVSKGKLG-LGVSLSDGKVVGL 249

Query: 267 ITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+GDI R   +        +V D+M + PK++L  T +T   +++ Q+ I  ++V D  
Sbjct: 250 ITDGDIRRAMERWQAEFFDHTVSDIMTREPKMVLPATKITEIQRIMHQNKIHTVLVCDVE 309

Query: 324 QKAIGIV 330
           +  +G+V
Sbjct: 310 RHLLGVV 316


>gi|115360926|ref|YP_778063.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
 gi|115286254|gb|ABI91729.1| KpsF/GutQ family protein [Burkholderia ambifaria AMMD]
          Length = 291

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 102/279 (36%), Positives = 150/279 (53%), Gaps = 5/279 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + +   L   F  AVE + A  GRVV+ G+GKSG +G K+A+TL+STGTP+FF+H  EA 
Sbjct: 2   AGVAARLDANFEEAVEIVLASNGRVVVCGMGKSGIVGRKIAATLSSTGTPAFFMHPGEAY 61

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           HGDLGM+T DD  + +S SG +DE+  ++ + R     LIA+T    S +A  A + L +
Sbjct: 62  HGDLGMVTPDDAFLAISNSGETDEVIKLIPFLRSNGNDLIALTGNPASTLAHAARVHLDI 121

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             E E+CP  LAPT S    LA+GDALA+ L+ +R F    F   HPGG LG   +   D
Sbjct: 122 GVEREACPLQLAPTASTTATLAMGDALAVTLMRARGFQPEHFARFHPGGSLGRRLLSTVD 181

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
              +  ++P V      +D +  ++  R G   V        GI+T+GDI R   +    
Sbjct: 182 DEMARRNLPFVTEDTSTLDVLDAMTRGRLGLAIVKRHAG--WGIVTDGDIRRAIERHGDG 239

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   +  D+M   P  +   T +  A+ L++Q  I  L+
Sbjct: 240 VLRRTAADMMSIEPSTVRPGTRVEDALLLMQQQRIGALL 278


>gi|315125560|ref|YP_004067563.1| arabinose-5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
 gi|315014073|gb|ADT67411.1| arabinose-5-phosphate isomerase [Pseudoalteromonas sp. SM9913]
          Length = 310

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 106/315 (33%), Positives = 164/315 (52%), Gaps = 10/315 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M   ++Q A   I  E  GL  + S L       F  AV KI +  GR +I G+GKSG I
Sbjct: 1   MDFKSIQIAKEVIQTEIDGLVYMSSLL----DDSFAKAVNKIISTSGRTIICGMGKSGII 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A++ ASTGTPSFF+H  EA HGDLGM+   D+ I +S SG +DE+  +L + +   
Sbjct: 57  GKKIAASFASTGTPSFFMHPGEAFHGDLGMVKHKDIFIAISNSGETDEVLKLLPFLKDNG 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IAIT    S ++ ++   L +    E+CP  LAPT+S    L +GDAL +AL+++R+
Sbjct: 117 NFIIAITGNVNSTLSQNSHCHLDISVPKEACPLQLAPTSSTTATLVMGDALTVALMDARD 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   +F   HPGG LG   +         +S+P++      I+ +  + + + G   V  
Sbjct: 177 FKPENFARFHPGGNLGRRLLSKVADEMYTESLPVISPNSSFIEVVHSIGKGKLGIAIVEF 236

Query: 259 EGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                 GIIT+GDI R      K    L   D+   NP  +L  + +  A+ ++    ++
Sbjct: 237 SNH--FGIITDGDIRRTMDCKYKAAFDLQASDIATHNPLSVLVSSRVHEAISVMESKKVN 294

Query: 316 VLMVVDDCQKAIGIV 330
            L+V+D     +G++
Sbjct: 295 TLLVMDGEN-LVGVI 308


>gi|302381869|ref|YP_003817692.1| KpsF/GutQ family protein [Brevundimonas subvibrioides ATCC 15264]
 gi|302192497|gb|ADL00069.1| KpsF/GutQ family protein [Brevundimonas subvibrioides ATCC 15264]
          Length = 332

 Score =  291 bits (745), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 125/318 (39%), Positives = 182/318 (57%), Gaps = 6/318 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A   I      L +LE ++          A + I +  G VV+TGIGKSGHIG K+A+
Sbjct: 19  EHARSVIRLNIEALQALERTV----DASVARACDIILSRPGYVVVTGIGKSGHIGGKIAA 74

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TLASTGT +FFVH AE SHGDLGM+  D  ++ +S SG S EL+  L + +R  IP+I +
Sbjct: 75  TLASTGTNAFFVHPAEMSHGDLGMLRHDTTLLAISNSGESRELRDPLLFCQRNGIPVIGM 134

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  + + + +P   E+CP+GLAPTTS +M LA+GDALA+ L+  R FS   F
Sbjct: 135 TQRGSSFLARMSAVAMVMPSVAEACPNGLAPTTSTLMTLALGDALAMVLMNRRGFSAEAF 194

Query: 205 YVLHPGGKLGTLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG       + M  +    P V +     D +  ++  R G VAV+D+  KL
Sbjct: 195 GMHHPGGALGMSLQSVREWMGDNHAPPPTVPLTASFADVVASITAGRKGAVAVLDDDGKL 254

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            G+IT+GD+ R F  D+  +  +DVM + P  +  D  ++  + LL  + IS L VV+D 
Sbjct: 255 AGMITDGDVRRAFAADVTGVRADDVMNRQPITVSPDQRMSDVVDLLTANRISNLFVVEDD 314

Query: 324 QKAIGIVHFLDLLRFGII 341
            +   IVH  +L++ G +
Sbjct: 315 -RPRAIVHVAELMQAGYL 331


>gi|15604365|ref|NP_220881.1| arabinose-5-phosphate isomerase [Rickettsia prowazekii str. Madrid
           E]
 gi|7388419|sp|Q9ZD42|Y505_RICPR RecName: Full=Uncharacterized protein RP505
 gi|3861057|emb|CAA14957.1| KPSF PROTEIN (kpsF) [Rickettsia prowazekii]
 gi|292572118|gb|ADE30033.1| KpsF [Rickettsia prowazekii Rp22]
          Length = 319

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 114/299 (38%), Positives = 178/299 (59%), Gaps = 5/299 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+    A R I +    L +L +++  +    F+  +E + + KGR+++TGIGKSG+I 
Sbjct: 4   TNNYRIIAKRVISSATSALETLSNNIPSD----FNRIIEFLLSFKGRIILTGIGKSGYIA 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A++ +STG PSF++H AEASHGDLGMITR+DL+++LS SG + EL  I+ Y    SI
Sbjct: 60  RKIAASFSSTGMPSFYLHPAEASHGDLGMITRNDLVMMLSNSGETKELFNIIEYCNNSSI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            + A+T    S +A  +D +L +P E +       PT S+++ L++GDA+   + E R F
Sbjct: 120 KIAAMTMNKNSTLAKRSDFLLKIP-ECQEASLIGTPTISSLIMLSLGDAIMTVIHEERGF 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +DF + HPGG +G       ++M SGD IPLV       + I I+++KR GC  V D+
Sbjct: 179 TRDDFKIYHPGGTIGANLTKIKNIMRSGDEIPLVYEDTSFTETIIIMNKKRLGCTLVTDK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            Q L GIIT+GD+ RN H  ++  +   +M KNP  I  +     A+ L++  NI+ + 
Sbjct: 239 EQNLIGIITDGDLRRNIHDQIHLKTASSIMTKNPHYISSEIFAQEALNLMKAKNITNIP 297


>gi|171913037|ref|ZP_02928507.1| arabinose-5-phosphate isomerase [Verrucomicrobium spinosum DSM
           4136]
          Length = 329

 Score =  291 bits (744), Expect = 1e-76,   Method: Composition-based stats.
 Identities = 113/323 (34%), Positives = 172/323 (53%), Gaps = 10/323 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSK 81
           + A R I  E   L+ L   +       F  AV  +        ++V+ G+GKSG+IG K
Sbjct: 11  EKARRVIELEIEELNRLRDRV----GESFTEAVNVLLGCLTATRKIVVCGVGKSGNIGRK 66

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L +TL STG  S  ++A +A HGDLG++   D +++LS+SG + EL  +L + RR  + L
Sbjct: 67  LVATLNSTGATSVNLNAQDALHGDLGVLDDGDAVVLLSYSGETQELVDLLPHLRRHRVTL 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT    S +A +AD+VL +  + E+CP  LAPT+S    L + DALA+ LLE+R F E
Sbjct: 127 IAITGGLSSTLARNADVVLDVHVQREACPLNLAPTSSTTAMLVLCDALAMVLLEARGFRE 186

Query: 202 NDFYVLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           +DF   HP G LG   +    DVM +G S+ L      + +A+  ++  R G   +V+  
Sbjct: 187 DDFAKYHPSGSLGRALLTKVGDVMRTGTSLALATEESTIQEALQAMTRARCGAAVIVNPA 246

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L G+ T GD  R F  D  +    V   M +NP  I E  L    + +L  H +  L+
Sbjct: 247 GMLAGVFTHGDFVRAFQADPNIAGRPVAHFMTRNPVSIAESKLAAEVLAVLEHHRVDDLV 306

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V+++  + +G+V   DL R  ++
Sbjct: 307 VLNETGQPVGLVDTQDLTRMKLV 329


>gi|300727171|ref|ZP_07060589.1| carbohydrate isomerase, KpsF/GutQ family [Prevotella bryantii B14]
 gi|299775557|gb|EFI72149.1| carbohydrate isomerase, KpsF/GutQ family [Prevotella bryantii B14]
          Length = 329

 Score =  291 bits (744), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 108/304 (35%), Positives = 186/304 (61%), Gaps = 10/304 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E + +  L      ++  +F  AVE +    G++++TG+GKSG++G+K+A+TLASTG
Sbjct: 25  LRNEAKAILDLI----PQMDDEFVKAVEMMYHCNGKIIVTGVGKSGNVGAKIAATLASTG 80

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP+FF++  +  HGDLG++T DD+++ LS SG +DEL   +      +IP+I++T    S
Sbjct: 81  TPAFFINPLDVYHGDLGVMTADDVVLALSNSGQTDELLRFIPMVLHMNIPIISMTGNKNS 140

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
           ++A +++  + +  E E+CP  LAPT+S    LA+GDALAIAL+E RNF   DF   HPG
Sbjct: 141 LLAKYSNAHIMVHVEREACPLNLAPTSSTTAALAMGDALAIALMEVRNFKPRDFAQFHPG 200

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGIITE 269
           G+LG   +  +  +   D++P++     L +AI  +S+ + G  V++V++  K+ GIIT+
Sbjct: 201 GELGKRLLTTAGDVMKTDNLPIIPQDMHLGEAIIKVSKGQLGLGVSLVND--KIAGIITD 258

Query: 270 GDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           GDI R   +        +V ++M  +PK +   T ++   +++++H I  ++V D  +  
Sbjct: 259 GDIRRAMERWQAEFFDHTVNEIMTIHPKQVYTSTKISEVQRIMQEHRIHTVLVTDKEKHL 318

Query: 327 IGIV 330
           +GIV
Sbjct: 319 LGIV 322


>gi|291616385|ref|YP_003519127.1| GutQ [Pantoea ananatis LMG 20103]
 gi|291151415|gb|ADD75999.1| GutQ [Pantoea ananatis LMG 20103]
          Length = 325

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 124/329 (37%), Positives = 182/329 (55%), Gaps = 6/329 (1%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           ++++G        ++ A  ++  E     +L  SL       F  A E I   +G+ +++
Sbjct: 1   MSQEGRMKNNEVLLEYAREALSLEIAEAQNLFHSL----DDAFINACELILQCQGKTIVS 56

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSGHIG K+A++LASTGTP+FFVH AEA HGDLGMIT  D+ I +S SGS+ EL+ I
Sbjct: 57  GIGKSGHIGKKIAASLASTGTPAFFVHPAEALHGDLGMITSQDVFIFISNSGSAAELQII 116

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +   +  ++P+IAIT+   S +A  A+ VL L    E+CP GLAPT+SA+  L +GDALA
Sbjct: 117 VPALKALNVPIIAITNVAHSFLAQQANHVLHLAVNREACPMGLAPTSSAVNTLLLGDALA 176

Query: 191 IALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +AL+ SRNF+E  F   HPGG LG       +  M  G+ IP V     ++DA+  L+  
Sbjct: 177 MALMRSRNFNEEQFARSHPGGSLGVGLLNSVAQCMRKGERIPRVNKNASVLDAMEELTRT 236

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV-ILEDTLLTVAMQL 308
             G V   D+   ++GI T+GD+ R            D ++  P   + E   +  A Q 
Sbjct: 237 GMGIVIACDDDNAIEGIFTDGDLRRALLAGKKLDDRLDPLLTRPGYKLAEHLSVAAATQK 296

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    IS   VV+   + +G ++  DL +
Sbjct: 297 LYDRRISAAPVVNQQGQLVGAINLYDLHK 325


>gi|304321243|ref|YP_003854886.1| arabinose 5-phosphate isomerase [Parvularcula bermudensis HTCC2503]
 gi|303300145|gb|ADM09744.1| arabinose 5-phosphate isomerase [Parvularcula bermudensis HTCC2503]
          Length = 327

 Score =  290 bits (743), Expect = 2e-76,   Method: Composition-based stats.
 Identities = 134/325 (41%), Positives = 195/325 (60%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + T+      +  E   L     +L  +L   F  AV  + A  G  V+TG+GKSGHIG 
Sbjct: 8   SDTIATGRAVLTTEANALH----TLGEQLDDAFAAAVRHLTATSGFTVVTGVGKSGHIGR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A+T ASTGTPSFFVH  EASHGDLGM+    ++I +S SG + EL+ IL YA R  +P
Sbjct: 64  KMAATFASTGTPSFFVHPTEASHGDLGMLDPKGVLIAISNSGETRELRDILLYANRRHVP 123

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LIA+T+   S +A  A++ L LP+ PE+CP+GLAPT+S  M LA+GDALA+A + +R FS
Sbjct: 124 LIAMTARPDSFLAKRAEVTLLLPRTPEACPNGLAPTSSTTMTLALGDALAVAAMTARGFS 183

Query: 201 ENDFYVLHPGGKLGTLFVCASDV--MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           + DF   HPGG+LG       +   + +G +IP +    PL D +  +SE R G VAVVD
Sbjct: 184 KEDFGARHPGGRLGMQLQRIEEYLGLQAGRTIPTLPSAAPLTDVLQKISEGRVGAVAVVD 243

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
               L+GI+T+GD+ R      D+ +L+  D+M ++P  I     ++ A+++     IS 
Sbjct: 244 AAGLLEGIVTDGDVRRGIMGYTDVQSLTAADLMSRSPITIAPHQRVSSAVEIFETRAISQ 303

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++V+    + IG+VH  DL+  G +
Sbjct: 304 ILVI-AEGQPIGVVHIKDLMADGYL 327


>gi|297170237|gb|ADI21275.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured myxobacterium HF0010_08B07]
          Length = 321

 Score =  290 bits (742), Expect = 3e-76,   Method: Composition-based stats.
 Identities = 116/327 (35%), Positives = 180/327 (55%), Gaps = 9/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + KN   + A ++ + E   L +   S     +F        I   KG++ ITG+GKSGH
Sbjct: 1   MKKNIFQKEAKKAFLIELEELKAFSKS----KNFNVEELCTHISNCKGKIFITGVGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K A+TL+STGTPSFF+H AEA HGDLGMI ++D II +S SG S E+  ++      
Sbjct: 57  IANKFAATLSSTGTPSFFIHPAEALHGDLGMIEKNDAIIAISKSGESKEICDLIPAINMK 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I   +IT    S +A  +   + +  + E+CP+ LAPT+S  + LA+GDA+A+ALL+S+
Sbjct: 117 KINFFSITENVNSTIAKASKSHILVKVKREACPNDLAPTSSTTVTLALGDAIAVALLKSK 176

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F+  DF   HPGGKLG        D+M       +VK    L D I  +SEK+ G   V
Sbjct: 177 GFTSEDFAKSHPGGKLGKKLTLRTRDLMVPIKKAAVVKDSDSLKDLIFEVSEKKQGIALV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             +G  + G+ ++GD+ R   K+  ++ + +  V+ K  K I  + L+  A + ++   +
Sbjct: 237 K-KGGHIIGVFSDGDLRRQLQKNIQIDKIKLSSVLTKKFKTINSEELVVKAAEKMKSFKV 295

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
             L VV + +K +GI+   D+L   +I
Sbjct: 296 YTL-VVKENEKVVGILTMHDILEANVI 321


>gi|87120034|ref|ZP_01075930.1| arabinose-5-phosphate isomerase [Marinomonas sp. MED121]
 gi|86164736|gb|EAQ66005.1| arabinose-5-phosphate isomerase [Marinomonas sp. MED121]
          Length = 310

 Score =  289 bits (740), Expect = 5e-76,   Method: Composition-based stats.
 Identities = 107/312 (34%), Positives = 159/312 (50%), Gaps = 9/312 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S++  A   I  E  GL      +   L  +F  A+  I   KGR +I G+GKSG IG K
Sbjct: 3   SSIDIAREVIQTEIDGL----DYMAKRLGSEFEMAINAIINTKGRTIICGMGKSGIIGKK 58

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ I +S SG +DE+  +L + R     +
Sbjct: 59  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDIFIAISNSGETDEVLKLLPFLRDNDNFV 118

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT +  S +A ++   L +    E+CP  LAPT+S    L +GDALA+AL++ R F  
Sbjct: 119 IAITGKENSTLASNSHCHLDIAVPKEACPLQLAPTSSTTATLVMGDALAVALMDVRGFKP 178

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F   HPGG LG   +         D++P V         I  +S    G   V     
Sbjct: 179 ENFARFHPGGNLGRRLLSKVRDEMFSDNLPSVSSDADFTSIIHKISSSHLGLTLVNFNDD 238

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L  IIT+GD+ R      ++   L  +D+   +P  I  +  +  A +++    I+ L+
Sbjct: 239 SLA-IITDGDLRRAMEAKGRNAFDLVAKDIASIHPASIFPEVSIEEAYEVMESKCITSLI 297

Query: 319 VVDDCQKAIGIV 330
           V  +    IGI+
Sbjct: 298 V-QENNSVIGIL 308


>gi|116071595|ref|ZP_01468863.1| KpsF/GutQ [Synechococcus sp. BL107]
 gi|116065218|gb|EAU70976.1| KpsF/GutQ [Synechococcus sp. BL107]
          Length = 328

 Score =  289 bits (739), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 102/322 (31%), Positives = 167/322 (51%), Gaps = 10/322 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +  E   +++    L  +        +E+    K ++VITG+GKSG +  K+A+T +S
Sbjct: 6   RCLEEEASAIATAAQRLSSDQVEAAIQLLERCADRKAKLVITGVGKSGIVARKIAATFSS 65

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  + +++  +A HGDLG++  +D+ ++LS SG + EL  +L + +R     IAI    
Sbjct: 66  IGLMALYLNPLDALHGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRRGTGRIAIVGRA 125

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +   +D+VL    + E CP  LAPT S  + +AIGDALA   +E R  S  DF + H
Sbjct: 126 ESSLGRGSDVVLEASVDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNH 185

Query: 209 PGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKG 265
           P G LG    + A+D+M     +  ++    L D I  L+    G   V D      L G
Sbjct: 186 PAGSLGKQLTMTAADLMVPASKLHPLQPDTSLPDVIGGLTRDGIGSGWVEDPNSPGSLLG 245

Query: 266 IITEGDIFRNF----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
           I+T+GD+ R        + +TL   D+M  +P  +  D L+  A++ +  +    ISVL 
Sbjct: 246 ILTDGDLRRALQDHSANNWSTLQAADLMTADPITVRSDVLVVKALEQMENNRRKPISVLP 305

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VV D ++ IG++   DL++ G+
Sbjct: 306 VVGDNKQLIGLLRLHDLVQAGL 327


>gi|257452361|ref|ZP_05617660.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|257465847|ref|ZP_05630158.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|315917004|ref|ZP_07913244.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317058904|ref|ZP_07923389.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|313684580|gb|EFS21415.1| polysialic acid capsule expression protein kpsF [Fusobacterium sp.
           3_1_5R]
 gi|313690879|gb|EFS27714.1| polysialic acid capsule expression protein kpsF [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 322

 Score =  288 bits (738), Expect = 6e-76,   Method: Composition-based stats.
 Identities = 119/327 (36%), Positives = 183/327 (55%), Gaps = 11/327 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L     +  A   I  E +GL  L++S+  EL      A + I   KG+++ITGIGK+G 
Sbjct: 2   LENQEILAIAHGIIDTEIQGLEKLKASMGQEL----IEAAKIIYESKGKLIITGIGKTGA 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TL+STGT + F+++ E  HGDLGM+  +D++I +S SG SDE+  I+   +  
Sbjct: 58  IGKKIAATLSSTGTTTIFMNSTEGLHGDLGMVNPEDIVIGISNSGESDEILHIIPAIKNI 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              + A+T    S +A  A+IVL    + E CP  LAP  S    LA+GDALA  L++ R
Sbjct: 118 GARVFAMTGNPNSRLAQEAEIVLFCGVDSEGCPLNLAPMASTTSALALGDALAGILMKMR 177

Query: 198 NFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +F   +F + HPGG LG        ++M +G+ + L  +   + D I  ++EKR G + V
Sbjct: 178 DFQPQNFAMYHPGGSLGRRLLSRVKNLMKTGEDLALCSLDTKMKDVIVKMNEKRLGILCV 237

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--H 312
           + +G++L GIITEGDI R     ++  T   E++M K  K + +D L   A+  + +  +
Sbjct: 238 M-KGEELVGIITEGDIRRALSREEEFFTFHAEEIMTKQYKKVEQDMLANEALSYMEEGKY 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFG 339
            ISV+ V     K +G+V   DLL+  
Sbjct: 297 QISVMPVF-HEGKFVGVVRIHDLLKIK 322


>gi|262037736|ref|ZP_06011178.1| arabinose 5-phosphate isomerase [Leptotrichia goodfellowii F0264]
 gi|261748208|gb|EEY35605.1| arabinose 5-phosphate isomerase [Leptotrichia goodfellowii F0264]
          Length = 325

 Score =  288 bits (737), Expect = 8e-76,   Method: Composition-based stats.
 Identities = 122/330 (36%), Positives = 192/330 (58%), Gaps = 14/330 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR-VVITGIGKSGH 77
           M+   ++ A ++   E   L  +++ +       F   V  I  ++ R VV+TGIGKSG 
Sbjct: 1   MEFDIIKEAQKTFNIEISELERVKNRIN----ENFEKLVYMINGLEHRKVVVTGIGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+TLASTGT + F++AAEA HGDLGMI+  D++I +S SG+SDE+ +I+   ++ 
Sbjct: 57  IGKKIAATLASTGTSAIFINAAEALHGDLGMISEGDIVIAISNSGNSDEILSIMTPIKKI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              ++A T    S +A HA +V+ +  E E+   G AP +S    L +GDALA  L++ R
Sbjct: 117 GAEIVAFTGNETSPLAKHAKVVINIGVEKEASNLGTAPMSSTTATLVMGDALASVLMKMR 176

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           NF+ENDF   HPGG LG  L +  SD+MHSG+ +P++     + + + +L++K+ G V +
Sbjct: 177 NFTENDFAKYHPGGSLGKRLLLTVSDLMHSGEELPVLAADENIENVLLVLTKKKMGAVCI 236

Query: 257 VD---EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
            +   E  KL GIITEGDI R     ++  +   +D+MI  P  I  + +   A++L+  
Sbjct: 237 SETGKENGKLIGIITEGDIRRALVHKEEFFSYKAKDIMISTPVSIGRNAMAMEALKLMEN 296

Query: 312 HN--ISVLMVVDDCQKAIGIVHFLDLLRFG 339
               I+VL VV++    +GI+   DL+   
Sbjct: 297 RKSQINVLPVVENGN-VVGIIRVHDLIGLK 325


>gi|291288309|ref|YP_003505125.1| KpsF/GutQ family protein [Denitrovibrio acetiphilus DSM 12809]
 gi|290885469|gb|ADD69169.1| KpsF/GutQ family protein [Denitrovibrio acetiphilus DSM 12809]
          Length = 295

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 108/298 (36%), Positives = 166/298 (55%), Gaps = 8/298 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK+  +Q A      E + +SSL   L       F   +  I   KGR+VI G+GKSGHI
Sbjct: 1   MKHDLIQLAKNVFELEAKAVSSLTKKLDDT----FIEVLNMIFNSKGRLVICGMGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTPSFF+H  EA HGDLGM+T  D+I+++S SG ++E+  ++   +   
Sbjct: 57  GKKIAATLASTGTPSFFMHPGEAYHGDLGMLTDYDIIMLISNSGETEEIIKLIPTLKYRK 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           IP+I+ITS   S ++  +D  L +    E+C  GLAPTTS    LA+GDALA+ L++  +
Sbjct: 117 IPMISITSNPLSTLSKLSDFNLDIGMHDEACLLGLAPTTSTTSTLAMGDALAVCLMQMHD 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   +F + HPGG LG   +     +    ++P+V       D + ++++ R G + +V 
Sbjct: 177 FKPENFAMFHPGGSLGRKLLTKVKDIMVDKNLPIVAPETGFADILHVITQCRLG-ICIVM 235

Query: 259 EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           EG+KL GIIT+GD+ R      +       +++M   P  I  D   +    ++ +  
Sbjct: 236 EGEKLLGIITDGDLRRALLSSERSRFDFQAKEIMTTTPITIDADENASAIEAIMIKKK 293


>gi|283778635|ref|YP_003369390.1| KpsF/GutQ family protein [Pirellula staleyi DSM 6068]
 gi|283437088|gb|ADB15530.1| KpsF/GutQ family protein [Pirellula staleyi DSM 6068]
          Length = 365

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 120/320 (37%), Positives = 174/320 (54%), Gaps = 9/320 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +Q A   +++E   ++ L + L       F  AV+ +   +G ++++G+GK+G I SK
Sbjct: 16  DPLQLARTVLLSESDAIAGLATRL----DHHFVSAVKMLLDCRGSLILSGMGKAGLIASK 71

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L +T ASTGT S FVH AEA HGDLG I   D++++LS+SG ++E+  IL   R F   +
Sbjct: 72  LTATFASTGTRSHFVHPAEAIHGDLGRIAEGDVVLMLSYSGETEEITRILPMLRDFGASI 131

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT +  S +A  A +VL L +  E+CP GLAP+TS    LA+GDALAI + +SR FS 
Sbjct: 132 IAITGQPSSTLARAATVVLDLGRITEACPLGLAPSTSTAAMLALGDALAIVVSQSRGFSA 191

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDE 259
           +DF   HPGG LG      +DVM       +      L +A+       +R G + ++D+
Sbjct: 192 DDFARYHPGGSLGRKLATVNDVMRPLAECRVAHENERLREALVNQRRPGRRSGAILLIDD 251

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             KL GI T+ D+ R      +      + DVM + P  I E T L  A  LL    IS 
Sbjct: 252 AGKLSGIFTDSDLARLLEAKRDAAIDGPLSDVMTRRPTTIQEGTSLAAACDLLAMKKISE 311

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L V+D   K  G+V   D++
Sbjct: 312 LPVIDHDGKPAGLVDITDVV 331


>gi|260591674|ref|ZP_05857132.1| arabinose 5-phosphate isomerase [Prevotella veroralis F0319]
 gi|260536474|gb|EEX19091.1| arabinose 5-phosphate isomerase [Prevotella veroralis F0319]
          Length = 323

 Score =  288 bits (737), Expect = 9e-76,   Method: Composition-based stats.
 Identities = 105/309 (33%), Positives = 181/309 (58%), Gaps = 8/309 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A++ I  E     +L      +L   F  AV+ +    G+V++TG+GKSG+IG+K+A+
Sbjct: 13  DYAIQCIKEEADATINLI----NQLDDNFEKAVDLMYHCTGKVIVTGVGKSGNIGAKIAA 68

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGTP+FFV+  +  HGDLG++  DD+++ LS SG +DEL   +      +IP+I +
Sbjct: 69  TLSSTGTPAFFVNPLDVYHGDLGVMKEDDVVLALSNSGQTDELLRFIPMVLHMNIPIIGM 128

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           ++   S++A ++   L +  E E+CP  LAPT S    L +GDALA+AL+  R+F   DF
Sbjct: 129 SANPHSLLAKYSTAHLKVWVEKEACPLNLAPTCSTTAALVMGDALAVALMRVRDFRPQDF 188

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG+LG   +  +  +   +++P++     L +AI  +S+ + G + +   G+K+ 
Sbjct: 189 AQFHPGGELGKRLLTTAQDVMISENLPIIPKEMHLGEAIIHVSKGKLG-LGIALSGKKIA 247

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           G+IT+GDI R   +        +V D+M   PK++L +  +T   Q++ +H +  ++V D
Sbjct: 248 GLITDGDIRRAMERWQAEFFNHTVNDIMTTEPKMVLPNIKITEIQQIMHRHKVHTVLVCD 307

Query: 322 DCQKAIGIV 330
           + +  +G+V
Sbjct: 308 EEKNLLGVV 316


>gi|239995073|ref|ZP_04715597.1| arabinose-5-phosphate isomerase [Alteromonas macleodii ATCC 27126]
          Length = 324

 Score =  288 bits (737), Expect = 1e-75,   Method: Composition-based stats.
 Identities = 110/325 (33%), Positives = 168/325 (51%), Gaps = 8/325 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K    K   L     +  A R I  E  GL+    S++ +L   F  +V KI   +GRV+
Sbjct: 3   KKDVSKTEELNSEKILNTASRVIDIEINGLT----SVRNKLGESFVKSVYKIVNSQGRVI 58

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+GKSG IG K+A++LASTGTPSF +H  EA HGDLGM+   D+ + +S SG ++EL 
Sbjct: 59  ICGMGKSGIIGKKIAASLASTGTPSFSMHPGEAFHGDLGMVHPSDIFVAISNSGETEELL 118

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L + R     +IAIT    S +  ++   + +    E+CPH LAPT S    LA+GDA
Sbjct: 119 KLLPFLRDNGNCVIAITKNKNSTLGLNSWATIEIAVPEEACPHQLAPTASTTATLAVGDA 178

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           L +AL+E R F+  +F   HPGG LG   +           IP +       + ++ +S+
Sbjct: 179 LTVALMELRRFTPENFARFHPGGSLGRRLLSKVKDEMLALPIPFLNPTSSFTEIVSSISQ 238

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            + G V V +   K   +IT+GD+ R       D+ ++   D+    P  +     +  A
Sbjct: 239 GKLGFVIVNNGKTKDYSVITDGDLRRAMEHYGTDVFSIKAHDIASVMPHTVSHSASMEHA 298

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIV 330
             L+  H I  L+VVD+ +  +G++
Sbjct: 299 YSLMDIHKIGFLLVVDNEE-LVGVL 322


>gi|189218675|ref|YP_001939316.1| Arabinose 5-phosphate isomerase and CBS domains [Methylacidiphilum
           infernorum V4]
 gi|189185533|gb|ACD82718.1| Arabinose 5-phosphate isomerase and CBS domains [Methylacidiphilum
           infernorum V4]
          Length = 325

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 118/323 (36%), Positives = 181/323 (56%), Gaps = 10/323 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAV---EKIKAIKGRVVITGIGKS 75
           M+   V  A R    E   L      ++ +L+  F  A+   EK     G++V+TG+GKS
Sbjct: 1   MQEDLVGLAKRVFDLEMDAL----RIVRKQLNAAFEQAILVLEKTILANGKIVVTGVGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TL STG PS  + A  A HGDLGM+ R D ++ LS+SG ++E+  ++ + +
Sbjct: 57  GHIGRKIAATLTSTGAPSVVLDAVNAFHGDLGMVNRGDAVVALSYSGETEEILRLVPHLK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R +  LIAIT    S +A ++D+VL++  + E+CP  LAPT+S    L +GDALA+ LLE
Sbjct: 117 RMTTSLIAITGNENSTLAKNSDLVLSVRIDREACPLNLAPTSSTTAMLVLGDALAMVLLE 176

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            R F + DF   HPGG LG    +   D+M     I +++    + +A+ + + KR G V
Sbjct: 177 KRGFKKEDFARFHPGGTLGRNLLLKVGDIMRPLSQIVILEEEAKVKEALRLWNVKRVGAV 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            VV+ G K+ GI T GD  RN+  +  +    +  VM KNP  +  D L    + +   +
Sbjct: 237 VVVNPGGKVIGIFTHGDFVRNYEVNHRIGEEPLGKVMTKNPVTVRVDKLAVEVLNVFEHN 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDL 335
            I  L+VVD+  + +G++   DL
Sbjct: 297 KIEDLIVVDEQYRVVGLIDSQDL 319


>gi|187920923|ref|YP_001889955.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
 gi|187719361|gb|ACD20584.1| KpsF/GutQ family protein [Burkholderia phytofirmans PsJN]
          Length = 311

 Score =  287 bits (734), Expect = 2e-75,   Method: Composition-based stats.
 Identities = 105/315 (33%), Positives = 162/315 (51%), Gaps = 10/315 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  +  +  A R    E        ++L   L   +  A+ +I   +GRV++ G+GKSG 
Sbjct: 1   MTAHDYISSAKRVFALESSA----IAALASALDDDYPQAIARILETRGRVIVCGMGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+A+T ASTGTP+FF+H  EA HGDLGM+T DD+ + +S SG + E+  +L + R  
Sbjct: 57  IGKKIAATFASTGTPAFFMHPGEAYHGDLGMVTSDDVFLAISNSGETHEVVQLLPFLRNN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +IA+T   +S +A      L +  E E+CP  LAPT S    LA+GDALA+ L+E+R
Sbjct: 117 HNFVIAMTGNRESTLARAGHCHLDIGVEKEACPLQLAPTASTTATLAMGDALAVTLMEAR 176

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F    F   HPGG LG   +         D +P V      ++ ++ ++    G   V 
Sbjct: 177 DFKPEGFARFHPGGSLGRRLLSTVGDEMVRDRLPFVGPDAKAMEIVSEMTRGSLGIAIVR 236

Query: 258 DEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           DE     G+IT+GD+ R               D M + P ++   T +  A+ LL Q  I
Sbjct: 237 DETG--WGLITDGDVRRLIEVHGPHAFEKCARDFMSREPTMVSPATRVQDALALLDQRRI 294

Query: 315 SVLMVVDDCQKAIGI 329
           + L+V  + Q+ +G+
Sbjct: 295 TSLLVF-EHQQIVGV 308


>gi|113476650|ref|YP_722711.1| KpsF/GutQ family protein [Trichodesmium erythraeum IMS101]
 gi|110167698|gb|ABG52238.1| KpsF/GutQ family protein [Trichodesmium erythraeum IMS101]
          Length = 324

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/320 (36%), Positives = 178/320 (55%), Gaps = 6/320 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L   S  Q     I  E   +S L  S+       +  AV +++  KG++V++GIGKSG 
Sbjct: 2   LTHKSIKQQLKSVIEQEISAISKLCESI----DDSWLKAVLRLRDCKGKLVVSGIGKSGS 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A++  STG P+ F+H  EASHGDLG++   D+++VLS SG + EL  I+ YA R 
Sbjct: 58  ISQKIAASFTSTGIPAIFIHPTEASHGDLGLLDSSDILLVLSASGQTSELLDIMQYASRL 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I IT    S +A  ADI+L +P  PE+C +GLAPT S   QL +GDAL + L+  R
Sbjct: 118 KSSIILITKNPNSSLAHFADIILQIPDLPEACINGLAPTISTTCQLVLGDALVVTLMSLR 177

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+  DF   HPGG LG L V   ++M+    IPL+ +G  + +AI  ++ K  GCV V+
Sbjct: 178 GFTSEDFKQFHPGGNLGALLVPVKNLMYKEHQIPLIDLGASIKEAIIEMNFKSLGCVGVI 237

Query: 258 DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   +  GI T+GD+ R+    ++    V   M  +P  I  D +++  +   +++ I  
Sbjct: 238 NHRNQYVGIFTDGDLRRSLEAKVSLEEPVSQHMTPSPLSIQSDLIISELIDFFQKNQIPN 297

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           + VV +  + IGIVH   L 
Sbjct: 298 VFVV-ENNEPIGIVHVHQLT 316


>gi|325107942|ref|YP_004269010.1| KpsF/GutQ family protein [Planctomyces brasiliensis DSM 5305]
 gi|324968210|gb|ADY58988.1| KpsF/GutQ family protein [Planctomyces brasiliensis DSM 5305]
          Length = 346

 Score =  286 bits (733), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 117/318 (36%), Positives = 177/318 (55%), Gaps = 9/318 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A R I  E   L +L   L       F  AV++I A  G VV+TGIGK+G IG K+A
Sbjct: 18  LREAKRIIEHEATALRNLALELDAR----FCAAVDQIAACTGSVVVTGIGKAGLIGQKIA 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGT S F+H AEA HGDLG +  DDL+++LS SG ++E+  +L   +R  IP+I+
Sbjct: 74  ATLSSTGTRSHFLHPAEAVHGDLGCLRPDDLVLILSNSGETEEVCRLLPVLQRLQIPIIS 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            T+   S +A  + +V+ L +  E+  HGL P+T+    LAIGDALA+ L   R FS  D
Sbjct: 134 FTATGHSTLAQASKVVIPLGRMREAGLHGLPPSTTTTAMLAIGDALALVLARLRGFSPQD 193

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI--TILSEKRFGCVAVVDEGQ 261
           F V HP G LG      +DVM +GDS+ +      +       +   +R G V ++D+  
Sbjct: 194 FAVYHPAGSLGRKLTPVTDVMRTGDSLRVAHEHETVRAVFGQALNPARRVGAVMILDDHD 253

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           KL G+ T+ D+ R      +      + +VM + P  I  D +L+  + LL +  +S L 
Sbjct: 254 KLSGLFTDSDLARILASHQEQKLDRPIREVMTQRPITIRPDAVLSEVVDLLAERKLSELP 313

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD+    +G++   D++
Sbjct: 314 VVDESGAPVGMIDITDII 331


>gi|149188193|ref|ZP_01866487.1| D-arabinose 5-phosphate isomerase [Vibrio shilonii AK1]
 gi|148837782|gb|EDL54725.1| D-arabinose 5-phosphate isomerase [Vibrio shilonii AK1]
          Length = 323

 Score =  286 bits (732), Expect = 3e-75,   Method: Composition-based stats.
 Identities = 118/327 (36%), Positives = 179/327 (54%), Gaps = 7/327 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             ++K   ++ A + I AE          L G L   F  AV  I   + +++++GIGKS
Sbjct: 1   MQVVKTEVIEYATQVINAEIAE----AQKLLGRLEDNFAQAVSHIVNCQSKIIVSGIGKS 56

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+TLASTG+P+FFVH AEA HGDLGMIT+ DL+I++S SG S E K +L   +
Sbjct: 57  GHIGKKMAATLASTGSPAFFVHPAEALHGDLGMITKGDLVILISNSGESAEFKTMLPILK 116

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              I +I +T    S +A ++D V+ +  + E+CP GLAPT+SA+  L +GDALAI  ++
Sbjct: 117 ERGISIIGMTGNTSSHLAQNSDCVVNIAIDSEACPLGLAPTSSAVNTLIMGDALAITAMK 176

Query: 196 SRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            R F   DF   HP G LG  L     +++   +   + +    L +AI++L E   G +
Sbjct: 177 IRKFDSIDFAQSHPAGALGAKLLTTVGNIISEFEHNAICQPEQSLAEAISVLCESGKGLI 236

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           A+      L G+ T+GD+ R      +    +E  M  N K          A+ L+  + 
Sbjct: 237 AIC-RQTTLVGVFTDGDLRRALANGAVLEDKIEQHMTTNGKQTSARVKAYDALNLMLDNA 295

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           IS L VV++  + +G++   D+ R GI
Sbjct: 296 ISALPVVNERDECVGVISISDIHRRGI 322


>gi|320105904|ref|YP_004181494.1| KpsF/GutQ family protein [Terriglobus saanensis SP1PR4]
 gi|319924425|gb|ADV81500.1| KpsF/GutQ family protein [Terriglobus saanensis SP1PR4]
          Length = 325

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 112/323 (34%), Positives = 175/323 (54%), Gaps = 7/323 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           M+NS +  A   +  E   L  L   + G +      A+ +I A     GRV+  G+GKS
Sbjct: 1   MENSPLTPA-ECVRVEADALMRLADRMSGPMKASIDDAIHRIVACADTGGRVIAVGLGKS 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  K  +TL S GTP+ F+HAAEA+HGD+GM+ + DL+I  S+SG ++EL  +L   +
Sbjct: 60  GHIAQKFVATLNSLGTPAQFLHAAEAAHGDIGMVGKRDLLIAFSYSGETEELLRLLDTLK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             +  LIA+     S +AC AD+VL +  + E+C   LAPT S    LA+ DALAI   +
Sbjct: 120 LRAAALIALCGSTGSTLACAADLVLDVSVDIEACGMNLAPTASTTSMLALSDALAIEAGQ 179

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            RNF   DF +LHPGG+LG       ++MH+ + +P V    PL+  I  +SEKR G   
Sbjct: 180 RRNFRPEDFALLHPGGRLGHRLQRVRELMHANERLPQVPPETPLLKVIHEMSEKRLGMTT 239

Query: 256 VVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           V+    +L G+I++GD+ R   ++       +  +V+  +   I E+     A+ ++   
Sbjct: 240 VLSPKGQLLGVISDGDLRRLLEREGGFALERTAGEVLHADATWIDENEFAATALAIMEAK 299

Query: 313 NISVLMVVDDCQKAIGIVHFLDL 335
            I+ ++  +  +   G++H  DL
Sbjct: 300 KITAIVACNANRTVTGVLHLHDL 322


>gi|87306459|ref|ZP_01088606.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
           3645]
 gi|87290638|gb|EAQ82525.1| hypothetical protein DSM3645_09007 [Blastopirellula marina DSM
           3645]
          Length = 363

 Score =  286 bits (732), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 104/322 (32%), Positives = 162/322 (50%), Gaps = 9/322 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   ++     I  E   LS++   L       F  A++ +    G +++TG+GK+G IG
Sbjct: 14  QEEVLRFGRTIIQQEAAALSAIAERLDAR----FGQALDLVMQCPGDIIVTGMGKAGLIG 69

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T ASTGTPS F+H AEA HGDLG +   D+++  S SG +DE+  ++   +    
Sbjct: 70  QKIAATFASTGTPSHFLHPAEAIHGDLGRVDEKDVVLAFSQSGETDEIVRLIPCLKSLGA 129

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            ++A+T+   + +A  A IVL L    E+  + LAP+TS    LA+GDALA+     R F
Sbjct: 130 QIVAVTANENNTLARAAKIVLPLGPIVEAGANRLAPSTSTAAMLALGDALALTCSWRRGF 189

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVV 257
              DF   HPGG LG       DVM       + +    + D         +R G + +V
Sbjct: 190 RPEDFARYHPGGSLGRKLALVEDVMRPLTECRISRYDQLVRDVFVSACRPGRRTGAIMLV 249

Query: 258 DEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           DE  KL GI T+ D+ R F      L    +  VM ++PK +     +  A+  + +  I
Sbjct: 250 DEQGKLAGIFTDSDLARIFETGRTELLDQPISIVMTQSPKTVTSGVRVLEALSAIAKSKI 309

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
           S L V++D  + IG++   DL+
Sbjct: 310 SELPVINDTGEPIGMLDITDLV 331


>gi|71083203|ref|YP_265922.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1062]
 gi|71062316|gb|AAZ21319.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1062]
          Length = 323

 Score =  286 bits (731), Expect = 4e-75,   Method: Composition-based stats.
 Identities = 125/327 (38%), Positives = 188/327 (57%), Gaps = 9/327 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K +  + A   I  E + L  L+ S+       F+ AVE +   + +V++ G+GKSG 
Sbjct: 1   MKKRNYKKIAKSVIDLEIKALKKLKDSINN----SFNEAVESLANCQSKVILCGVGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I +K+++TL+S GTPSF + A + SHGDLG I++ D++I++S+SGS++ELK I+ YA R 
Sbjct: 57  IAAKISATLSSVGTPSFSLSANDCSHGDLGSISKKDILILISYSGSTEELKNIIKYANRN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            I LI I S+  S++   +DI L +P E      G+ PT+S I QL+IGDALA+A+L  +
Sbjct: 117 KITLIGIMSKKNSILYKASDIKLLIP-EVTEAGLGIVPTSSTINQLSIGDALAVAVLNKK 175

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N ++ DF   HP G LG       ++M +G  IP V     +  A+ I+S K+ G + V 
Sbjct: 176 NINKKDFKKFHPSGNLGAQLRTVEELMITGKKIPFVNESLNMKKALQIISNKKLGTLIVQ 235

Query: 258 DEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +  +   GIIT+G I R      +L  LSV+ VM KNP  I  DTL   A+ ++    I+
Sbjct: 236 NNKKITTGIITDGQIRRVNAMSNNLQDLSVKKVMTKNPISINLDTLAEKALSIMNAKKIT 295

Query: 316 VLMVVDDCQ--KAIGIVHFLDLLRFGI 340
            L V  D    K IGI+H  ++L   I
Sbjct: 296 SLCVHKDKNKKKTIGILHIHNILHSNI 322


>gi|153834335|ref|ZP_01987002.1| sugar isomerase, KpsF/GutQ family [Vibrio harveyi HY01]
 gi|148869260|gb|EDL68278.1| sugar isomerase, KpsF/GutQ family [Vibrio harveyi HY01]
          Length = 307

 Score =  286 bits (731), Expect = 5e-75,   Method: Composition-based stats.
 Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 11/312 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +  A   I  E  GL  ++  +  E    F  AV KI+   GRV+I G+GKSG IG K
Sbjct: 2   NAINVAQEVIDIEVNGLLYMKDRIGNE----FELAVSKIQETTGRVIICGMGKSGIIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A++ ASTGTPSFF+H  EA HGDLGM+  +D+ + +S SG +DE+  +L + +     +
Sbjct: 58  IAASFASTGTPSFFMHPGEAFHGDLGMVKPEDIFVAISNSGETDEVLKLLPFLKDNQNYI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAIT + +S +A +A   L +    E+CPH LAPT S    L +GDAL +AL+++R FS 
Sbjct: 118 IAITGKRESTLAKNAHCHLDIAVPKEACPHQLAPTASTTATLVMGDALTVALMDARGFSP 177

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F   HPGG LG   +          ++P+++      + IT ++E   G V +     
Sbjct: 178 ESFARFHPGGSLGRRLLSKVRDEM-HSTLPIIEPNAAFTNVITAITEGALGLVLLKMPES 236

Query: 262 KLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               IIT+GD+ R      KD+  L   D+  K P V+  +  + +A +L+ Q  I+ L+
Sbjct: 237 --WEIITDGDVRRAMESKGKDVFDLKASDISSKQPAVVSANANIQLAFELMEQKRITSLL 294

Query: 319 VVDDCQKAIGIV 330
           V +D  + +GI+
Sbjct: 295 V-EDDGQIVGIL 305


>gi|114769298|ref|ZP_01446924.1| KpsF/GutQ family protein [alpha proteobacterium HTCC2255]
 gi|114550215|gb|EAU53096.1| KpsF/GutQ family protein [alpha proteobacterium HTCC2255]
          Length = 329

 Score =  285 bits (730), Expect = 6e-75,   Method: Composition-based stats.
 Identities = 132/324 (40%), Positives = 196/324 (60%), Gaps = 10/324 (3%)

Query: 26  CALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                ++     + +L  SL   +   Q   AV  I    GR+VI+G+GKSG IG KL +
Sbjct: 6   TFKDCLLTGTNAMVTLTDSLKDEKFVKQVEAAVNVICTTSGRLVISGMGKSGIIGKKLVA 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPS F+H AEASHGDLGM+ +DD+++++S+SG S EL  I+ Y++RF +P+IA 
Sbjct: 66  TFASTGTPSLFLHPAEASHGDLGMLCKDDVLLLMSFSGESRELIDIIRYSKRFDVPIIAF 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +   ADI+L LPK  ESCPH LAPT+S ++QLA+GDALAI LL+ + FSE DF
Sbjct: 126 TANANSTLGKAADILLQLPKVKESCPHNLAPTSSTLIQLALGDALAITLLKEKGFSEEDF 185

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +  HPGGKLG   +   D+MH+ D +PL+    P  D + I+S K +G V + ++  ++ 
Sbjct: 186 FNFHPGGKLGAALMPIKDLMHTDDKLPLISQDAPFSDILNIISSKGYGIVGLKNDIGEMS 245

Query: 265 GIITEGDIFRNFHKD--------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           G+IT+GD+ R   K+        +   S +++M K      E+      + +L Q NIS 
Sbjct: 246 GVITDGDVRRYITKNTDGSMKEVMFGTSGKEIMTKCFVSFEENQSCAKILSVLEQKNISS 305

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
             V+    K +G++  L L++ G+
Sbjct: 306 AFVL-KNGKPLGLISMLMLIQAGV 328


>gi|116329828|ref|YP_799546.1| sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116123517|gb|ABJ74788.1| Sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
          Length = 322

 Score =  285 bits (730), Expect = 7e-75,   Method: Composition-based stats.
 Identities = 115/325 (35%), Positives = 184/325 (56%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   +   ++I  E   +     +L   +      A+E I   KG++++TG+GKSG +G 
Sbjct: 2   DPIFEKIEKAIDTEIESILHFRKNLDPSI----KQAIELILQSKGKLIVTGVGKSGDVGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++STL+STGTPS F+H A+A+HGD G+I+ +D+II +  SG S+EL  ++   +     
Sbjct: 58  KISSTLSSTGTPSIFLHPADAAHGDAGIISIEDVIIAIGKSGESEELLNLIPTIKNIGAK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T+  +S +A  +DIVL  P   E+CP  LAPT+S  + L +GDA+A+ L+E +NF 
Sbjct: 118 LISMTANVESKLAKESDIVLITPVLKEACPLELAPTSSTTIALILGDAIAMCLMELKNFK 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +F + HP G+LG        DVM +G  +  V     L D +T ++ KR G   V D 
Sbjct: 178 KENFALYHPAGRLGKRLSLKIEDVMRNGKDLAKVLPDAKLEDILTEITVKRQGATGVTDL 237

Query: 260 GQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
             KL GIIT+ DI +   +    +++S E +M  NP +    +     ++ +      IS
Sbjct: 238 SGKLLGIITDFDIRKKLKEGKLDSSISAEQLMNPNPTMFQSGSNAYEVLRQMESRPNPIS 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  +VD+ +K IGIV   DLL+ G+
Sbjct: 298 VAPIVDNSKKLIGIVSVHDLLQKGL 322


>gi|116329513|ref|YP_799233.1| sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116122257|gb|ABJ80300.1| Sugar phosphate isomerase [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
          Length = 322

 Score =  284 bits (728), Expect = 9e-75,   Method: Composition-based stats.
 Identities = 115/325 (35%), Positives = 184/325 (56%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   +   ++I  E   +     +L   +      A+E I   KG++++TG+GKSG +G 
Sbjct: 2   DPIFEKIEKAIDTEIESILHFRKNLDPSI----KQAIELILQSKGKLIVTGVGKSGDVGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++STL+STGTPS F+H A+A+HGD G+I+ +D+II +  SG S+EL  ++   +     
Sbjct: 58  KISSTLSSTGTPSIFLHPADAAHGDAGIISIEDVIIAIGKSGESEELLNLIPTIKNIGAK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           LI++T+  +S +A  +DIVL  P   E+CP  LAPT+S  + L +GDA+A+ L+E +NF 
Sbjct: 118 LISMTANVESKLAKESDIVLITPVLKEACPLELAPTSSTTIALILGDAIAMCLMELKNFK 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +F + HP G+LG        DVM +G  +  V     L D +T ++ KR G   V D 
Sbjct: 178 KENFALYHPAGRLGKRLSLKIDDVMRNGKDLAKVLPDAKLEDILTEITVKRQGATGVTDL 237

Query: 260 GQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
             KL GIIT+ DI +   +    +++S E +M  NP +    +     ++ +      IS
Sbjct: 238 SGKLLGIITDFDIRKKLKEGKLDSSISAEQLMNPNPTMFQSGSNAYEVLRQMESRPNPIS 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  +VD+ +K IGIV   DLL+ G+
Sbjct: 298 VAPIVDNSKKLIGIVSVHDLLQKGL 322


>gi|312887315|ref|ZP_07746917.1| KpsF/GutQ family protein [Mucilaginibacter paludis DSM 18603]
 gi|311300211|gb|EFQ77278.1| KpsF/GutQ family protein [Mucilaginibacter paludis DSM 18603]
          Length = 311

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 108/308 (35%), Positives = 172/308 (55%), Gaps = 8/308 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A R    E   L  +   +       F   +E I A +G+ V+TGIGKSG IG K+++
Sbjct: 3   DIARRVFDVEIESLQQVAEMI----DDSFSNVIEAILASRGKTVVTGIGKSGLIGKKISA 58

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL+STGT SFF+H  EA HGDLGM+  DD++I++S+SG +DE+  I+ Y +     LI I
Sbjct: 59  TLSSTGTSSFFLHPGEAFHGDLGMVGADDIVILISYSGETDEILKIIPYLKWNGNVLIGI 118

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A + +  L +  + E+CP  LAPT+S    L +GDA+A+AL+E R F   DF
Sbjct: 119 TGQPNSTIAKNCNYHLNIAIKHEACPLKLAPTSSTTAALVMGDAIAVALMEVRGFQPADF 178

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              HPGG LG   +     +   D++P +       + +  +SE R G V ++ E  KL+
Sbjct: 179 ARFHPGGSLGRKLLIRVSSLMRTDNLPYISSKASFTELVLKMSEGRLGMV-IIGEPDKLE 237

Query: 265 GIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VD 321
           G++T+GD+ R    + D   L + D+M +NP V+  +  ++   QL+ +  I+ ++V   
Sbjct: 238 GVVTDGDLRRALVTNADTTQLHIRDMMTRNPVVVDSEEHVSQVEQLMMERKIATVLVGSS 297

Query: 322 DCQKAIGI 329
              + +G+
Sbjct: 298 AEHRVVGV 305


>gi|90406834|ref|ZP_01215026.1| GutQ protein [Psychromonas sp. CNPT3]
 gi|90312071|gb|EAS40164.1| GutQ protein [Psychromonas sp. CNPT3]
          Length = 318

 Score =  284 bits (728), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/315 (35%), Positives = 178/315 (56%), Gaps = 7/315 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           L +   ++        +   L +    L  E    +  A++ +K+  GR+++ G+GKSGH
Sbjct: 5   LSEEQRLKEVRNVFKIQSDALDAHRKGLGTE----YLDALDLMKSCTGRIIVCGMGKSGH 60

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG K+++TLAS GTPSFF+H  EA HGDLGMIT +DL++++S+SG +DE+  I+   + F
Sbjct: 61  IGKKISATLASVGTPSFFMHPGEAFHGDLGMITTEDLLLLISYSGETDEVLKIIPSLQHF 120

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I+IT    S +A ++D+VL    + E+CP  LAPTTS  + L IGDAL+  L   +
Sbjct: 121 GNKIISITGAKDSTLAKNSDVVLVAAIQKETCPINLAPTTSTTLTLVIGDALSSVLTLEK 180

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           +F+  DF   HPGG LG   +         +++P VK    L D + ++++ R G   V+
Sbjct: 181 HFTPMDFARFHPGGSLGKRLLTFVRNEMRHENLPFVKTDTSLTDILLVMTQTRTGLALVM 240

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E   L+G+IT+GD+ R     K ++     D+M  NP  I  +  L+ A  L+R+ +I 
Sbjct: 241 HED-HLQGVITDGDLRRFMLSGKSVHETIASDLMNSNPCFISPNARLSEAEDLMREKHIK 299

Query: 316 VLMVVDDCQKAIGIV 330
            L+V  + +   GI+
Sbjct: 300 WLIVSANEKDIEGII 314


>gi|226227027|ref|YP_002761133.1| arabinose 5-phosphate isomerase [Gemmatimonas aurantiaca T-27]
 gi|226090218|dbj|BAH38663.1| arabinose 5-phosphate isomerase [Gemmatimonas aurantiaca T-27]
          Length = 323

 Score =  284 bits (727), Expect = 1e-74,   Method: Composition-based stats.
 Identities = 111/325 (34%), Positives = 188/325 (57%), Gaps = 8/325 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
              + ++   R +  E   L + E++L  E    F  AV+ +   +GRV++ G+GKSG +
Sbjct: 5   DTTTILERGRRVLALEAEALRASETALGDE----FVHAVQLLTECRGRVIVAGVGKSGLV 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A+T  STGTP+ F+H  E+ HGDLG++  DD+ I++S SG SDEL  ++    R  
Sbjct: 61  ARKMAATFTSTGTPAMFLHPVESVHGDLGIVGPDDVAILISKSGESDELLGLIEALARLG 120

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA+T+   S +A HAD+ L L  + E+CPH LAPTTS  + +A+GDALA+A+L+ + 
Sbjct: 121 VRMIAMTAVAGSRLARHADVTLDLLVKEEACPHDLAPTTSTTVTMALGDALAVAVLQQKG 180

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGG LG   +     +    ++P +     + +A+ +L+ +R   +AVV 
Sbjct: 181 FRAEDFARFHPGGALGRKLLTRVRDVMEQTNLPTLDRQATMREAVVLLAGRR--GIAVVV 238

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  ++ G++T GD+ R   +  D+ ++ V  VM   P++ ++  L +  +  +  H I  
Sbjct: 239 EQGRVSGVVTAGDLTRLLERQADVLSMPVASVMSATPRLAVDHELGSAVVHRMETHGIMA 298

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           + V+D  ++ +G+VH  DL+R G +
Sbjct: 299 MPVIDADERLVGVVHLHDLMRAGAV 323


>gi|45655954|ref|YP_000040.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
 gi|45599187|gb|AAS68677.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Copenhageni str. Fiocruz L1-130]
          Length = 322

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 179/325 (55%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   +   ++I  E   +       +  L      A+E I   KG++++TG+GKSG +G 
Sbjct: 2   DPIFEKIEKAIDTEIESIL----YFRKNLDPSIKQAIELILECKGKLIVTGVGKSGDVGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++STL+STGTPS F+H A+A+HGD G+I+ +D+II +  SG S+EL  ++   +     
Sbjct: 58  KISSTLSSTGTPSVFLHPADAAHGDAGIISCEDIIIAIGKSGESEELLNLIPTIKNIGAK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+++T+   S +A  +D+VL  P   E+CP  LAPT+S  + L +GDA+A+ L+E +NF 
Sbjct: 118 LVSMTANVDSKLAKESDVVLITPVLKEACPLELAPTSSTTIALILGDAIAMCLMELKNFK 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             +F + HP G+LG        DVM     +  V     L + +T ++ KR G   V D 
Sbjct: 178 RENFALYHPAGRLGKRLSLKIDDVMRKDKDLAKVLPDTKLENILTEITVKRQGATGVTDL 237

Query: 260 GQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
              L GIIT+ DI +   +    +++S E +M  +P + L  +     ++ +      IS
Sbjct: 238 NGTLLGIITDFDIRKKLKEGKLDSSISAEQLMNPSPTMFLSGSNAYDVLKQMESRPNPIS 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  +VD+ ++ IGIV   DLL+ G+
Sbjct: 298 VAPIVDNSKRLIGIVSIHDLLQKGL 322


>gi|24212746|ref|NP_710227.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24193385|gb|AAN47245.1| polysialic acid capsule expression protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 322

 Score =  284 bits (726), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 109/325 (33%), Positives = 180/325 (55%), Gaps = 9/325 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   +   ++I  E   +       +  L      A+E I   KG++++TG+GKSG +G 
Sbjct: 2   DPIFEKIEKAIDTEIESIL----YFRKNLDPSIKQAIELILECKGKLIVTGVGKSGDVGK 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++STL+STGTPS F+H A+A+HGD G+I+ +D+II +  SG S+EL  ++   +     
Sbjct: 58  KISSTLSSTGTPSVFLHPADAAHGDAGIISCEDIIIAIGKSGESEELLNLIPTIKNIGAK 117

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+++T+   S +A  +D+VL  P   E+CP  LAPT+S  + L +GDA+A+ L+E +NF 
Sbjct: 118 LVSMTANVDSKLAKESDVVLITPVLKEACPLELAPTSSTTIALILGDAIAMCLMELKNFK 177

Query: 201 ENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             +F + HP G+LG        DVM     +  V     L + +T ++ KR G   V+D 
Sbjct: 178 RENFALYHPAGRLGKRLSLKIDDVMRKDKDLAKVLPDTKLENILTEITVKRQGATGVIDL 237

Query: 260 GQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NIS 315
              L GIIT+ DI +   +    +++S E +M  +P + L  +     ++ +      IS
Sbjct: 238 NGTLLGIITDFDIRKKLKEGKLDSSISAEQLMNPSPTMFLSGSNAYDVLKQMESRPNPIS 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  +VD+ ++ IGIV   DLL+ G+
Sbjct: 298 VAPIVDNSKRLIGIVSIHDLLQKGL 322


>gi|187735030|ref|YP_001877142.1| KpsF/GutQ family protein [Akkermansia muciniphila ATCC BAA-835]
 gi|187425082|gb|ACD04361.1| KpsF/GutQ family protein [Akkermansia muciniphila ATCC BAA-835]
          Length = 323

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 108/326 (33%), Positives = 176/326 (53%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI---KAIKGRVVITGIGKSGHI 78
           + +  A      E   L  + S L       F+ AV+ +        ++VI G+GKSG+I
Sbjct: 2   NHLTRAKSVFEMEIEELRGVLSRL----DDNFNKAVDLMSQALDRGNKIVIVGVGKSGNI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G+K+ +TL STGTP+  + +  A HGDLG++   D+ I +S+SG + EL  +L + +RF 
Sbjct: 58  GAKIVATLNSTGTPTVLLDSLNALHGDLGIVQDGDVCIAMSFSGETSELLTLLPFIKRFE 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P+I++T    S +A ++DIVL      E+CP  LAPT+S    L +GDALA+AL+E+R+
Sbjct: 118 LPIISMTGNTGSSLAKYSDIVLDTGVSREACPLNLAPTSSTTAMLVMGDALAMALVEARH 177

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+  DF   HPGG LG       SD+M  G+ + ++     + D +  ++    G   ++
Sbjct: 178 FTARDFAKRHPGGSLGRALLTRVSDIMRRGEEMAMLPETASVNDCLKAMTTAHAGACVLL 237

Query: 258 DEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            E +KL GI T GD  R +  +  +    V   M +NP  ++ED L   A + +   +I 
Sbjct: 238 TEDRKLAGIFTHGDFVRAYGANPLIGEQPVSGFMTRNPIYVMEDDLAAEAAKAVSNRHID 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+V++     +GI+   DL R  ++
Sbjct: 298 DLVVLNAEMAPVGIIDLQDLARLKLV 323


>gi|196234330|ref|ZP_03133159.1| KpsF/GutQ family protein [Chthoniobacter flavus Ellin428]
 gi|196221597|gb|EDY16138.1| KpsF/GutQ family protein [Chthoniobacter flavus Ellin428]
          Length = 323

 Score =  283 bits (725), Expect = 2e-74,   Method: Composition-based stats.
 Identities = 125/326 (38%), Positives = 185/326 (56%), Gaps = 10/326 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHI 78
             ++ A R I  E   +  L   L       F  AVE I      +G+VV+ G+GKSGHI
Sbjct: 2   DYLEKARRVIALEMAEVQRLLERL----DASFLEAVETIHHCVENRGKVVVVGVGKSGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL STG+P+  +++  A HGDLG++   D+I+ LS SG +DEL  IL    RF+
Sbjct: 58  GEKIAATLTSTGSPAVVLNSLNALHGDLGVVADGDVILALSSSGETDELVNILPALSRFN 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +IA+T   KS +A ++ + L +  E E+CP  LAPT+S  + L +GDALA+ LLE+R 
Sbjct: 118 VRIIAMTGNPKSFIAQNSHVHLDVNVEQEACPLNLAPTSSTTVMLVLGDALAMVLLEARG 177

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F + DF   HPGG+LG    +  + +M   + + LV     + +A+  +++ R G    V
Sbjct: 178 FQKEDFARFHPGGRLGRTLLLKVNQIMRGKEQMALVSPTVTIREALLKMADVRAGLAVAV 237

Query: 258 DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+   L GI T GD  R+F  H DL   ++ D +I+ P  I  D L    + L+ QH I 
Sbjct: 238 DDAGGLAGIFTHGDFGRHFRAHADLLERTLGDFLIRRPITIHHDKLAVEVLHLIEQHRID 297

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFGII 341
            L+VVDD  + +G+V   DL RF +I
Sbjct: 298 DLVVVDDENRPVGVVDSQDLARFRLI 323


>gi|319760582|ref|YP_004124520.1| arabinose 5-phosphate isomerase [Candidatus Blochmannia vafer str.
           BVAF]
 gi|318039296|gb|ADV33846.1| arabinose 5-phosphate isomerase [Candidatus Blochmannia vafer str.
           BVAF]
          Length = 325

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/322 (34%), Positives = 176/322 (54%), Gaps = 7/322 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A  +I  E      +   L   +      A + +   +G+V+++GIGKSGHIG KL
Sbjct: 7   LLEYAKETIKIEINEALHMLDRLDESI----VVACQILLRCEGKVIVSGIGKSGHIGKKL 62

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A++L+STGTP+FF+H +EA HGDLGMI   D++I +S+SG S E+  ++      +IP+I
Sbjct: 63  AASLSSTGTPAFFMHPSEALHGDLGMIESKDVVIFISYSGRSYEISLLIPVLIENNIPII 122

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T  + S +A  ++ VL +  + E+CP  L PT+SA+  L +GDAL ++L+  + FS  
Sbjct: 123 ALTGNSNSPLAVQSNCVLNIQIQREACPMELVPTSSAVNALMMGDALTMSLMRYKGFSIE 182

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            F   HPGG LG     C   VM  G+ I  V     ++DA+  L     G  AV D+ Q
Sbjct: 183 KFAQFHPGGTLGAQLLNCVHHVMRIGNKISKVFWKSTVMDAMFELLRTGLGLTAVCDDNQ 242

Query: 262 KLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            + G+ T+ D+ R   +   +L  S+   M K    + ++  +  A+++L + NI+   V
Sbjct: 243 YVIGVFTDEDLRRWIIQQDKSLKDSICIAMTKPGHYVAQECRVDEAIKILYKLNITAAPV 302

Query: 320 VDDCQKAIGIVHFLDLLRFGII 341
           VD     +G +   DL +  II
Sbjct: 303 VDKSGILVGSISINDLYKVKII 324


>gi|297621939|ref|YP_003710076.1| carbohydrate isomerase, KpsF/GutQ family [Waddlia chondrophila WSU
           86-1044]
 gi|297377240|gb|ADI39070.1| carbohydrate isomerase, KpsF/GutQ family [Waddlia chondrophila WSU
           86-1044]
          Length = 323

 Score =  283 bits (724), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 114/317 (35%), Positives = 180/317 (56%), Gaps = 10/317 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E+  L+    ++  E        ++++   KG  V TG+GKSG +  K+A T+ STG
Sbjct: 10  LEKERSYLNHFFDNIDME---AVDAVLQELVNCKGITVFTGVGKSGLVAKKMAVTMTSTG 66

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           T + ++    A HGD+G++  DDL IVLS SG SDEL  ++ + R   + +++I S   S
Sbjct: 67  TRALYLSPTNALHGDIGILKPDDLFIVLSKSGESDELMNLIPFIRNQGVKVVSIVSNQDS 126

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  +DIVL +  E E CP  +APTTS  +Q  +GD LAIAL+  +  S  DF   HP 
Sbjct: 127 RLAKASDIVLFISPERELCPFDMAPTTSTTIQGIVGDVLAIALMRLKKVSIEDFVKSHPA 186

Query: 211 GKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G+LG    +   D+M  GD++P+ K    L+D++  LS K+ GCV +VD+ +++KGI T+
Sbjct: 187 GRLGKRATILVKDLMLKGDAVPVGKGDDKLVDSLVELSNKQCGCVIIVDDDRRMKGIFTD 246

Query: 270 GDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDC 323
           GD+ R   K   D     +E +M K P+ I  + L   A++ +  +    I +L V+D+ 
Sbjct: 247 GDLRRALQKYGVDALESPLERLMTKTPRSISPNMLAYAAVKEMESNQKSPIMILPVLDEE 306

Query: 324 QKAIGIVHFLDLLRFGI 340
            + +G+V   DLL+ GI
Sbjct: 307 GRVVGVVKMHDLLQAGI 323


>gi|183222753|ref|YP_001840749.1| carbohydrate isomerase KpsF/GutQ family protein [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
 gi|189912785|ref|YP_001964340.1| sugar phosphate isomerase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167777461|gb|ABZ95762.1| Sugar phosphate isomerase [Leptospira biflexa serovar Patoc strain
           'Patoc 1 (Ames)']
 gi|167781175|gb|ABZ99473.1| Carbohydrate isomerase, KpsF/GutQ family [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Paris)']
          Length = 324

 Score =  282 bits (723), Expect = 3e-74,   Method: Composition-based stats.
 Identities = 110/328 (33%), Positives = 180/328 (54%), Gaps = 9/328 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + +  T+    +++  E   L       +  L       ++ I   KG+V++TG+GKSG 
Sbjct: 1   MKEKDTLGIIKQALDDEISSLV----YFRENLDPSVKNCIDLILNSKGKVIVTGVGKSGD 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K++ TL+STGT ++F+H  +ASHGD G++  DD+++ +  SG S+EL  IL   R+ 
Sbjct: 57  IAKKISHTLSSTGTSAYFLHPTDASHGDSGIVGPDDVVLAIGKSGESEELNYILPTLRKI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              ++ IT+ +KS +A  +D+V+  P   E+CP  LAPT+S  + L +GDA+A+AL+E +
Sbjct: 117 GAKIVGITANSKSKLAELSDVVIITPVLKEACPLDLAPTSSTTIALVLGDAIAVALMELK 176

Query: 198 NFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
            F  +DF + HP G+LG       SDVM  G+    + +   L   +  ++EK  G   V
Sbjct: 177 EFKADDFALYHPAGRLGKRLSLYLSDVMRKGERNASIPVNANLEVILKEITEKGIGATGV 236

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLR--QH 312
           VDE  KL G+IT+ DI +   K   + SV  +++M  NP   L +      +  +   + 
Sbjct: 237 VDENFKLVGLITDFDIRKYLTKHTLSPSVTAKEMMNPNPNHYLPNEKAYDVLINMEGRER 296

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            ISV  VVD+    +G++   DLL+ G+
Sbjct: 297 PISVAPVVDENGIFVGMISLHDLLQKGL 324


>gi|78183795|ref|YP_376229.1| KpsF/GutQ [Synechococcus sp. CC9902]
 gi|78168089|gb|ABB25186.1| KpsF/GutQ [Synechococcus sp. CC9902]
          Length = 342

 Score =  282 bits (723), Expect = 4e-74,   Method: Composition-based stats.
 Identities = 104/329 (31%), Positives = 169/329 (51%), Gaps = 10/329 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +    R +  E   +S+    L  E        +E+    K ++VITG+GKSG +  K
Sbjct: 13  SVLSALTRCLQEEASAISTAAERLSSEQVEAAIQLLERCADRKAKLVITGVGKSGIVARK 72

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T +S G  + +++  +A HGDLG++  +D+ ++LS SG + EL  +L + +R     
Sbjct: 73  IAATFSSIGLMALYLNPLDALHGDLGVVAPEDVCLMLSNSGETTELLEVLPHLKRRGTGR 132

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IAI    +S +   +D+VL    + E CP  LAPT S  + +AIGDALA   +E R  S 
Sbjct: 133 IAIVGRAESSLGRGSDVVLEASIDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISP 192

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG    + A+D+M     +  ++    L D I  L+    G   V D  
Sbjct: 193 ADFALNHPAGSLGKQLTMTAADLMVPVSKLHPLQPDTSLPDVIGGLTRDGIGSGWVEDPT 252

Query: 261 --QKLKGIITEGDIFRNFHKD----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN- 313
               L GI+T+GD+ R          ++L+  D+M  +P  +  D L+  A++ +  +  
Sbjct: 253 SPGSLMGILTDGDLRRALQDHNANTWSSLTAADLMTADPITVRADVLVVKALEQMENNRR 312

Query: 314 --ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             ISVL VV D ++ IG++   DL++ G+
Sbjct: 313 KAISVLPVVGDNKQLIGLLRLHDLVQAGL 341


>gi|91762367|ref|ZP_01264332.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1002]
 gi|91718169|gb|EAS84819.1| Arabinose 5-phosphate isomerase [Candidatus Pelagibacter ubique
           HTCC1002]
          Length = 323

 Score =  281 bits (720), Expect = 9e-74,   Method: Composition-based stats.
 Identities = 122/315 (38%), Positives = 184/315 (58%), Gaps = 9/315 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            I  E + L  L++S+       F  AVE +   + +V++ G+GKSG I +K+++TL+S 
Sbjct: 13  VIDLEIKALKKLKNSINN----SFSEAVESLANCQSKVILCGVGKSGLIAAKISATLSSV 68

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GTPSF + A + SHGDLG I++ D++I++S+SGS++ELK I+ YA R  I LI I S+  
Sbjct: 69  GTPSFSLSANDCSHGDLGSISKKDVLILISYSGSTEELKNIIKYANRNKITLIGIMSKKN 128

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S++   +DI L +P E      G+ PT+S I QL+IGDALA+A+L  +N ++ DF   HP
Sbjct: 129 SILYKASDIKLLIP-EVTEAGLGIVPTSSTINQLSIGDALAVAVLNKKNINKKDFKKFHP 187

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G LG       ++M +G+ IP V     +  A+ I+S K+ G + V +  +   GIIT+
Sbjct: 188 SGNLGAQLRTVEELMITGNKIPFVNESLNMKKALQIISNKKLGTLIVQNNKKITTGIITD 247

Query: 270 GDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--K 325
           G I R      +L  LSV+ VM KNP  I  DTL   A+ ++    I+ L V  D    K
Sbjct: 248 GQIRRVNAMSNNLQDLSVKKVMTKNPISINLDTLAEKALSIMNAKKITSLCVHKDKNKKK 307

Query: 326 AIGIVHFLDLLRFGI 340
            +GI+H  ++L   I
Sbjct: 308 TVGILHIHNILHSNI 322


>gi|149178364|ref|ZP_01856955.1| hypothetical protein PM8797T_08444 [Planctomyces maris DSM 8797]
 gi|148842782|gb|EDL57154.1| hypothetical protein PM8797T_08444 [Planctomyces maris DSM 8797]
          Length = 347

 Score =  281 bits (720), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 109/318 (34%), Positives = 176/318 (55%), Gaps = 9/318 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++ A   I +E   L  +  +L  EL      AV+ I + KG V++TG+GK+G IG K+ 
Sbjct: 18  LRDAREIIFSEADALRQMGRALGTELCD----AVDLIMSRKGAVILTGMGKAGLIGQKIC 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL+STGT S F+H AEA HGDLG +  +D I+ LS SG ++EL+ +L   ++ ++P+I 
Sbjct: 74  ATLSSTGTRSHFLHPAEAIHGDLGCLHAEDTILALSNSGETEELRRLLPLIQKMNLPIIG 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT+   S +     +VL L    E+ PH LAP+T+    LA+GDAL++ + ++R FS   
Sbjct: 134 ITARTTSTLGAACQVVLCLGDLKEAGPHQLAPSTTTTAMLAMGDALSLVISKARGFSPLQ 193

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS--EKRFGCVAVVDEGQ 261
           F   HPGG LG      ++VM   + + +      + +A   LS   +R G V ++D+  
Sbjct: 194 FATFHPGGSLGRRLTKINEVMRPRNEVRVTGETTSIREAFVRLSLPGRRSGAVIIIDDAS 253

Query: 262 KLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           ++ GI T+ D+ R   +  +      +  VM + P  I +D  L  A+ LL+   +S L 
Sbjct: 254 RVTGIFTDSDLARLLEERRDEQLDQPISQVMTRKPTTIHDDASLEAAIDLLKARKLSELP 313

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD  Q  +G++   D++
Sbjct: 314 VVDRGQHLVGLIDITDVI 331


>gi|296123973|ref|YP_003631751.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
 gi|296016313|gb|ADG69552.1| KpsF/GutQ family protein [Planctomyces limnophilus DSM 3776]
          Length = 391

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 106/318 (33%), Positives = 161/318 (50%), Gaps = 9/318 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++     +  E + L  L   L       F  AVE +   +G V++TGIGK+G IG K+ 
Sbjct: 30  LREGREILRTEGQALLDLSRRL----DASFCAAVEYLSNTRGAVIVTGIGKAGLIGQKIT 85

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TL STG+ ++F+H  EA HGDLG +  DD+I+  S SG + EL A+L       IP+++
Sbjct: 86  ATLCSTGSRAYFLHPTEALHGDLGCVGPDDVILAFSNSGETAELLALLPIFEARGIPVVS 145

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T+   S +   + +V+T+ +  E    GLAP+TS    LAIGDALA    + R+FS  D
Sbjct: 146 VTASPVSTLGRASQVVVTMGRLHECGVQGLAPSTSTTAMLAIGDALAFVTCKRRSFSARD 205

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE--KRFGCVAVVDEGQ 261
           F  LHP G LG      S+VM     + +      + +     S   +R G V +VDE  
Sbjct: 206 FARLHPAGTLGRRLTVVSEVMRKAQDVRIALETTSVRNVFIGQSRPGRRTGAVMLVDEEG 265

Query: 262 KLKGIITEGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GI T+ D+ R   +  +      + +VM   P  I    LL   +QL  +  +S   
Sbjct: 266 LLTGIFTDSDLARLLEQKRDEQLDAPIRNVMTSRPTTISPTMLLEEVLQLFAERRLSEFP 325

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD+    +G+V   D++
Sbjct: 326 VVDESGHPVGLVDITDMI 343


>gi|294083597|ref|YP_003550354.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292663169|gb|ADE38270.1| KpsF/GutQ family protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 313

 Score =  281 bits (719), Expect = 1e-73,   Method: Composition-based stats.
 Identities = 118/316 (37%), Positives = 172/316 (54%), Gaps = 7/316 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +  +  A     A    ++ LE  L       F  AV+ +    G VV+ G+GKSG +
Sbjct: 1   MASDAITAAKGLFTAYHEAMTRLEQGL----GTGFSAAVDMMLNTAGHVVVCGMGKSGLV 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTPS F+H AEA HGDLGM+ R D+++++S SG ++E+  +L   +R  
Sbjct: 57  GRKIAATLASTGTPSLFLHPAEAIHGDLGMVRRGDVVLLMSHSGETEEIIRLLPALKRLE 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +IA TS   S +A  A+I L +  + E+CP  LAPTTS++  L +GDALA+AL+E R 
Sbjct: 117 TRIIAFTSNANSTMAREAEIALDISVDREACPLNLAPTTSSLNTLVLGDALAVALMEKRG 176

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F   DF   HPGG LG   +         D++P V     + DA+  ++E R G   V  
Sbjct: 177 FEAADFAATHPGGALGRRLLTHVRDRMRVDNLPFVDADSSVQDALMTMTEGRLGLTLV-G 235

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +KL GI+T+GD+ R      DL    V DV   +P  I  D ++  A + + +  I  
Sbjct: 236 TPEKLDGILTDGDLRRLLVSGADLAGARVGDVASADPLSIAPDAMMNEAEEKMLEARIQC 295

Query: 317 LMVVDDCQKAIGIVHF 332
           L+V DD    +GI+  
Sbjct: 296 LVVKDDQAVVVGILQI 311


>gi|87123156|ref|ZP_01079007.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9917]
 gi|86168876|gb|EAQ70132.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9917]
          Length = 328

 Score =  281 bits (718), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 100/307 (32%), Positives = 161/307 (52%), Gaps = 10/307 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L GE        +E+    K ++VITG+GKSG +  K+A+T +S G  + +++  +A H
Sbjct: 21  RLSGEQVEGALALLERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALH 80

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++  DD+ ++LS SG + EL  +L + +R     IA+    +S +A  +D+VL   
Sbjct: 81  GDLGVVAPDDVCLLLSNSGETSELLEVLPHLKRRGTARIALVGRAESSLARGSDVVLEAS 140

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASD 222
            + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG    +  +D
Sbjct: 141 VDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTMTVAD 200

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF---- 276
           +M     +  ++   PL + I  L++   G   V D     +L G+IT+GD+ R      
Sbjct: 201 LMVPAAQLAPLRPTTPLPEVIGRLTQGAIGSGWVEDPQQAGRLIGLITDGDLRRALRNHG 260

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFL 333
            +   +L+  D+M  +P  +  D L   A+Q +  +    I VL VVD   +  G++   
Sbjct: 261 SERWASLTAADLMTADPITVAADLLAVEALQRMEHNRRKPIGVLPVVDTSDRLQGLLRLH 320

Query: 334 DLLRFGI 340
           DL++ G+
Sbjct: 321 DLVQAGL 327


>gi|225155922|ref|ZP_03724407.1| Arabinose-5-phosphate isomerase [Opitutaceae bacterium TAV2]
 gi|224803375|gb|EEG21613.1| Arabinose-5-phosphate isomerase [Opitutaceae bacterium TAV2]
          Length = 335

 Score =  280 bits (717), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 119/336 (35%), Positives = 181/336 (53%), Gaps = 11/336 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +L   S +  A   +  E+  + +  +SL  +       AV+       +++ TG+GKS
Sbjct: 1   MALASKSVINHARECLQIEQDAIDATRASLDTQF-VNVVRAVQSAIEAGRKLIFTGVGKS 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            HI  KLA T  STG PS F+ A +A HGDLG+    D++I+LS SG SDE+  ++   +
Sbjct: 60  AHISIKLAGTFNSTGIPSCFLDATQALHGDLGLCAEGDVVILLSNSGQSDEVIKLVTLLK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           RF + ++A TS   S +A H  + L      E+CP G+APT S    LA+GDALA+ LL+
Sbjct: 120 RFGVVIVAFTSNPDSELARHTPLRLLYRVPREACPLGIAPTASTTAALALGDALAMVLLK 179

Query: 196 SRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            R  + NDF   HP G LG +  +  SD+M +GD +P+      L DAI  +++ + G +
Sbjct: 180 IRGLTRNDFARFHPAGNLGRILLLRVSDIMRTGDRLPVAPETVTLQDAILRMTKAKSGSI 239

Query: 255 AVV-------DEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
           A+V         G KL GI+T+GD  R+     D     V + M ++PK I +D L   A
Sbjct: 240 ALVSTARKPGGGGGKLTGILTDGDFRRSALTGPDFLQKPVSEFMTRSPKTIRDDALGVDA 299

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +++  QH I  L+VVD   + +G+V   DL +  I+
Sbjct: 300 LRVFEQHKIDDLIVVDRSGRPVGLVDGQDLPKLKIV 335


>gi|254455498|ref|ZP_05068927.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           HTCC7211]
 gi|207082500|gb|EDZ59926.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           HTCC7211]
          Length = 322

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 122/328 (37%), Positives = 192/328 (58%), Gaps = 10/328 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K    + A   I  E + L  L+  +       F+ AV +I   + +V++ G+GKSG 
Sbjct: 1   MNKKKFTKIAKDVIELEIKSLQKLKKKIDN----SFNKAVVEIAKCQSKVIVCGVGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I SK+A+TL+S GTP+F + A+++SHGDLG I + D++I+LS+SG ++ELK I+ YA R 
Sbjct: 57  IASKIAATLSSVGTPAFKLSASDSSHGDLGSIQKKDVLILLSYSGQTNELKNIIQYANRN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + LI I S+  S++   ADI L +P        G+ PT+S  +QLA+GDALAIA ++ +
Sbjct: 117 KVLLIGIMSKKDSILYKAADIKLLIP--QVIESGGIVPTSSTTVQLALGDALAIAAMQYK 174

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           NF + DF  +HP G LG       D+M +G  IP V+    +  A+ IL++K+ G + + 
Sbjct: 175 NFGKLDFKKIHPAGNLGLKLKTVEDLMVTGPQIPFVQDNINMKKALEILTKKKLGFLIIQ 234

Query: 258 DEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+ +K  GIIT+G I R   K  + ++L V++VM KNP  + +D L   A+ L+    I+
Sbjct: 235 DKNKKTIGIITDGQIRRFKSKKNNFHSLKVKNVMTKNPIGVDKDMLAAKALALMNHKKIT 294

Query: 316 VLMVVDDCQ--KAIGIVHFLDLLRFGII 341
            L V       K IG++H  ++L   I+
Sbjct: 295 SLSVFSKKNKSKTIGVIHIHNILASNIV 322


>gi|325289716|ref|YP_004265897.1| KpsF/GutQ family protein [Syntrophobotulus glycolicus DSM 8271]
 gi|324965117|gb|ADY55896.1| KpsF/GutQ family protein [Syntrophobotulus glycolicus DSM 8271]
          Length = 320

 Score =  280 bits (716), Expect = 2e-73,   Method: Composition-based stats.
 Identities = 117/322 (36%), Positives = 175/322 (54%), Gaps = 8/322 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++ A R   AE   L  +  +L       F   ++ I   +G+++I G+GKSGH+G K
Sbjct: 2   SKIEIAKRVFDAEISALQKIADNLDET----FDRILDLILNCQGKIIIIGMGKSGHVGGK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+T++S G P+ FVH  EA HGDLGMI + D++I +S+SG SDE+  IL   R    P+
Sbjct: 58  IAATMSSLGVPTIFVHPGEAMHGDLGMIQKQDVVIAISYSGESDEIIKILPNIRIIGAPI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT+   S +A ++ IV       E+C  GLAPT S  + +  GDALAIA  E+ NF +
Sbjct: 118 IGITNNGNSTLAHNSAIVQVFENLKEACQLGLAPTASTTVAMVYGDALAIAASETINFGK 177

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF + HP G LG    +  SD+M        V  G  L  AI   S      VAVVD+ 
Sbjct: 178 QDFALYHPAGSLGKKLTIRVSDLMKHLMESDTVNEGSLLKQAIIAFSRTGADVVAVVDKT 237

Query: 261 QKLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +KL GIIT G+I R      D+   ++ D++ + P  I  + +   A++++ + NI  + 
Sbjct: 238 KKLIGIITNGEIERAINMGSDIYKTTIFDMVNRFPVYINSEEMAVDALKIMMEKNIHSIP 297

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VV +  + +GI+    +L  GI
Sbjct: 298 VVKEE-RIVGIISKQSILDIGI 318


>gi|313648188|gb|EFS12633.1| arabinose 5-phosphate isomerase [Shigella flexneri 2a str. 2457T]
          Length = 273

 Score =  279 bits (714), Expect = 4e-73,   Method: Composition-based stats.
 Identities = 111/273 (40%), Positives = 159/273 (58%), Gaps = 2/273 (0%)

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKSGHIG K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I
Sbjct: 1   GIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLI 60

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +      SI L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA
Sbjct: 61  IPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALA 120

Query: 191 IALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           +A++++R F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS  
Sbjct: 121 MAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRT 180

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
             G VAV D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++
Sbjct: 181 GLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPVNEAMTTGGTTLQAQSRAIDAKEV 240

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 241 LMKRKITAAPVVDENGKLTGAINLQDFYQAGII 273


>gi|289676089|ref|ZP_06496979.1| KpsF/GutQ [Pseudomonas syringae pv. syringae FF5]
          Length = 271

 Score =  279 bits (713), Expect = 5e-73,   Method: Composition-based stats.
 Identities = 124/272 (45%), Positives = 174/272 (63%), Gaps = 7/272 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I++T +++S++A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F
Sbjct: 120 KMISLTGDSESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGF 179

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           +  DF   HPGG LG    +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+
Sbjct: 180 TAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVE 239

Query: 259 EGQKLKGIITEGDIFRNFHK--DLNTLSVEDV 288
               L GI T+GD+ R   +  D+    +++V
Sbjct: 240 ADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEV 271


>gi|297182780|gb|ADI18934.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured SAR11 cluster bacterium HF0010_09O16]
          Length = 323

 Score =  278 bits (712), Expect = 7e-73,   Method: Composition-based stats.
 Identities = 120/317 (37%), Positives = 191/317 (60%), Gaps = 11/317 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
             I  E + L+ L++++       F+ AV +I   + +V++ G+GKSG I +K+ASTL+S
Sbjct: 12  EVIDLEIKALTKLKNNIND----SFNLAVNQILKCQSKVILCGVGKSGLIANKIASTLSS 67

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            GTPSF++ A++ SHGD+G +++ D++I++S SG ++ELK I+ +A R  I LI I S+ 
Sbjct: 68  VGTPSFYLSASDCSHGDMGGLSKKDILILISNSGETNELKNIIQFANRNKILLIGIVSQK 127

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            SV+   ADI L +PK  E+    + PT+S   QLA+GDALAIA ++ R F++ DF  +H
Sbjct: 128 NSVLYRSADIKLLIPKATEAG--NIIPTSSTTSQLALGDALAIATMKHRKFNKKDFKKIH 185

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGII 267
           P G LG       D+M    +IP V     L DA+ +LS K+ G + V D+ +    G+I
Sbjct: 186 PAGSLGAQLKTVEDIMLKDKAIPFVNENLKLKDALKVLSSKKLGFLLVRDKKKLTTLGLI 245

Query: 268 TEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           ++GDI R   K  +L+ +SV+++M KNP  I +D L    + L+    I+ L V +   K
Sbjct: 246 SDGDIRRFSQKNQNLHNISVKEIMTKNPIGIDKDELAAKGLSLMADKKITSLCVYNKKNK 305

Query: 326 A--IGIVHFLDLLRFGI 340
              IG++H  ++L+  I
Sbjct: 306 LKTIGVLHIHNILQSNI 322


>gi|116074469|ref|ZP_01471731.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9916]
 gi|116069774|gb|EAU75526.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. RS9916]
          Length = 328

 Score =  278 bits (712), Expect = 8e-73,   Method: Composition-based stats.
 Identities = 100/322 (31%), Positives = 169/322 (52%), Gaps = 10/322 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +  E   +++    L  +        +E+    K ++VITG+GKSG +  K+A+T +S
Sbjct: 6   RCLQEEAAAIAAAADRLSVDQVEGALALLERCADRKAKLVITGVGKSGIVARKIAATFSS 65

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  + +++  +A HGDLG++  DD+ ++LS SG + EL  +L + +R     IA+    
Sbjct: 66  IGLMALYLNPLDALHGDLGVVAPDDVCLLLSNSGETSELLEVLPHLKRRGTARIALVGRA 125

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +S +A  +D+VL    + E CP  LAPT S  + +AIGDALA   +E R  S  DF + H
Sbjct: 126 ESSLALGSDVVLEASVDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFAINH 185

Query: 209 PGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKG 265
           P G LG    +  +D+M     +P ++   PL D I+ L++   G   V D     +L G
Sbjct: 186 PAGSLGKQLTMTVADLMVPAQQLPALRPETPLPDVISQLTQGAIGSGWVEDPEHAGRLVG 245

Query: 266 IITEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
           +IT+GD+ R       +   +L  +D+M  +P  +  + +   A+Q +  +    ISVL 
Sbjct: 246 LITDGDLRRALRDQNPEGWASLQAKDLMTADPITVTAELMAVDAIQRMEHNRRKPISVLP 305

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           VV+   +  G++   DL++ G+
Sbjct: 306 VVNAAGELDGLLRLHDLVQAGL 327


>gi|33519910|ref|NP_878742.1| D-arabinose 5-phosphate isomerase [Candidatus Blochmannia
           floridanus]
 gi|33504255|emb|CAD83518.1| sugar phosphate isomerase involved in capsule formation [Candidatus
           Blochmannia floridanus]
          Length = 326

 Score =  278 bits (711), Expect = 9e-73,   Method: Composition-based stats.
 Identities = 115/323 (35%), Positives = 178/323 (55%), Gaps = 8/323 (2%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +Q A  ++  E      +   L   +      A   +   KG+V+++G+GKSGHIG K+
Sbjct: 7   LLQYAKETLAIEIDEAQHMLERLDDSI----VLACRILLECKGKVIVSGMGKSGHIGKKI 62

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A++LASTGT +FFVH AEA HGDLGMI   D++I +S+SG + E+  ++       IP+I
Sbjct: 63  AASLASTGTSAFFVHPAEALHGDLGMIGEQDVVIFISYSGYAYEIMTLMPLLSDSGIPVI 122

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T + +S +A  A+ VL + ++ E+CP  L PT+S++  L +GDAL I+L+  + FS  
Sbjct: 123 ALTGDLQSPLAVGAECVLNIKRKREACPMELVPTSSSVNALMMGDALTISLMRYKGFSTE 182

Query: 203 DFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            F   HPGG+LG+    C   +M  G+ I  V     ++DA+  LS    G  AV D   
Sbjct: 183 QFARSHPGGRLGSKLLNCVHHIMRVGEHISKVFCTGTVMDAMFELSRTGLGLTAVCDIND 242

Query: 262 KLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            + G+ T+GD+ R   +  +   SV   M     VI  D  + VA+++L + NI+   VV
Sbjct: 243 HVIGVFTDGDLRRWIVQGKSLTDSVNLAMTCPGCVIDRDWKVDVALKMLHKLNITAAPVV 302

Query: 321 DDCQKAIGIVHFLDLLRF--GII 341
           +     +G ++  DL R   GII
Sbjct: 303 NKLGIIVGSINVHDLHRRCNGII 325


>gi|29839986|ref|NP_829092.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydophila
           caviae GPIC]
 gi|29834333|gb|AAP04970.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila caviae
           GPIC]
          Length = 329

 Score =  277 bits (709), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 104/327 (31%), Positives = 168/327 (51%), Gaps = 10/327 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +      I  +K  L    ++ Q E ++      EKI   +G +  +G+GKSG I  K
Sbjct: 6   TAIDLCQDIITKQKESLERFFATFQCEGTWLLA---EKILNHQGSIFFSGVGKSGCIARK 62

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +A+TL S G  +FF+ + +  HGD G++   D++ + S SG + EL   + Y +   + +
Sbjct: 63  IAATLQSFGERAFFLCSGDLLHGDFGVVRPGDIVCLFSKSGETRELLEWIPYFKERGVFI 122

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             ITS   S +A   D V+ LP   E  P  L PTTS   QL  GD L+I LL SR  S 
Sbjct: 123 AGITSSAYSSLAILCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLSITLLRSRGISL 182

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            D+   HPGG++G  +     D M     +P       + D++ I S    GCV VV+E 
Sbjct: 183 ADYGKNHPGGQIGLKVVGKIRDYMFPKTEVPFCSPDNTVADSLDIFSSYGCGCVCVVNEL 242

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISV 316
            ++ GI T+GD+ R   +   D+    ++D+M  +P+VI ED  + + +Q++   + +S+
Sbjct: 243 FEILGIFTDGDLRRALSRHGGDILLQKLKDIMTPSPRVISEDADVLLGLQMMETGNPVSI 302

Query: 317 LMVVD--DCQKAIGIVHFLDLLRFGII 341
           L VVD  D +  +G++    L + G+I
Sbjct: 303 LPVVDAKDQKYVVGLLQMHTLAKAGLI 329


>gi|262199116|ref|YP_003270325.1| KpsF/GutQ family protein [Haliangium ochraceum DSM 14365]
 gi|262082463|gb|ACY18432.1| KpsF/GutQ family protein [Haliangium ochraceum DSM 14365]
          Length = 334

 Score =  277 bits (708), Expect = 2e-72,   Method: Composition-based stats.
 Identities = 114/316 (36%), Positives = 176/316 (55%), Gaps = 6/316 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +++ V+ A      +   ++ L   +       F  A+E ++   G VVI G+GKSG IG
Sbjct: 21  RDARVEQAREVFREQAAAIADLGQRI----DASFTRAIELLRTTPGHVVICGMGKSGLIG 76

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+TLASTGTPSFFVH AEA HGDLGMIT  + +++LS+SG ++E+  +L + +R  +
Sbjct: 77  QKIAATLASTGTPSFFVHPAEAYHGDLGMITAQNTVMLLSYSGETEEVVRLLPHLQRMRV 136

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           PLI +     S +A   D+ L +  E E+CP+ LAPT+S +  LA+GDALA++L+  R F
Sbjct: 137 PLIGLVGRLDSTLARQVDVALDVSVEREACPNNLAPTSSTLAALAMGDALAVSLIHERKF 196

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             +DF   HPGG LG    C    +     +PL++    L +A+  L++ RFG   VVD 
Sbjct: 197 GPHDFARFHPGGSLGRRLCCNVADLMRIAPLPLLRPQDALREAVLTLAQGRFGIAVVVDA 256

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +K  G+ITE D+       +    + V  +M +   VI  +  +  A Q+  +    VL
Sbjct: 257 ARKPLGVITEADLRTTLDAAEQPLAMPVSMIMRRELPVIEANARINDAEQVALRLGTEVL 316

Query: 318 MVVDDCQKAIGIVHFL 333
           +  D+  K +GI+   
Sbjct: 317 IATDENDKVVGILDLR 332


>gi|46447416|ref|YP_008781.1| putative Gut Q protein [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46401057|emb|CAF24506.1| putative Gut Q protein [Candidatus Protochlamydia amoebophila
           UWE25]
          Length = 319

 Score =  276 bits (707), Expect = 3e-72,   Method: Composition-based stats.
 Identities = 104/294 (35%), Positives = 165/294 (56%), Gaps = 7/294 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
              VE +   +  +  TG+GKSG +  K+A T+ STGT + ++   +A HGD+G++++DD
Sbjct: 26  EKLVELLLETEKSIFFTGVGKSGLVAKKIALTMVSTGTKALYLSPTDAVHGDIGIVSQDD 85

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           + I+LS SG SDEL  ++   R     L+A+    +S +A     V+TLP + E CP  +
Sbjct: 86  IFIMLSKSGESDELLNLVPPIRNKGGILVAVVCNPQSRLAAACHYVITLPFQEELCPFDM 145

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPL 232
           APT S I Q   GD +  AL+  +NFS ND+ + HP G++G        D+M +G+ +P+
Sbjct: 146 APTMSTIFQGLFGDLVTAALMRRKNFSLNDYALNHPSGRIGKRMTLKVKDIMLTGEKVPI 205

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 L + +  LS KR GC+ VVD   +L GI T+GD+ R   K    +   S+ ++M
Sbjct: 206 CYPQDQLTNVLVELSNKRCGCILVVDRDHRLLGIFTDGDLRRMLQKVGGKVLESSMIEIM 265

Query: 290 IKNPKVILEDTLLTVAMQLLRQ---HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             NP+ I  + L   AM+L+       ISV  V++  Q+ IG++H  DL++ G+
Sbjct: 266 TPNPRSIESELLAYEAMKLMEADYCKRISVFPVLNLEQQVIGLLHIHDLIQTGL 319


>gi|330981133|gb|EGH79236.1| KpsF/GutQ [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 253

 Score =  276 bits (706), Expect = 4e-72,   Method: Composition-based stats.
 Identities = 105/252 (41%), Positives = 158/252 (62%), Gaps = 3/252 (1%)

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I +I++T +++S++
Sbjct: 2   SFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGIKMISLTGDSESIL 61

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  ADI L      E+CP  LAPT+S    L +GDALA+ALL++R F+  DF   HPGG 
Sbjct: 62  AKAADINLNAHVVHEACPLNLAPTSSTTAALVMGDALAVALLDARGFTAEDFAFSHPGGA 121

Query: 213 LGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           LG    +   +VMHSG+S+P V+ G  L DA+  ++ K  G  A+V+    L GI T+GD
Sbjct: 122 LGRRLLLKVENVMHSGESLPSVQRGTLLRDALLEMTRKGLGMTAIVEADGTLAGIFTDGD 181

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + R   +  D+    +++VM  + K    + L   A++++  + IS L+VVD   + +G 
Sbjct: 182 LRRTLDRPVDIRQTIIDEVMTLHGKTAHAEMLAAEALKIMEDNKISALVVVDQNDRPVGA 241

Query: 330 VHFLDLLRFGII 341
            +  DLLR G++
Sbjct: 242 FNLQDLLRAGVM 253


>gi|294460481|gb|ADE75818.1| unknown [Picea sitchensis]
          Length = 342

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 97/308 (31%), Positives = 163/308 (52%), Gaps = 6/308 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
             L+         Q     + + A KG +  TG+GKSG +  K+  T  STGT + F+  
Sbjct: 35  KHLDYFFSNVEYAQLQAFTQVLMAAKGVIFFTGVGKSGFVAQKITQTFVSTGTKAVFLSP 94

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +A HGD+G++  +D++++ S SG+++EL  ++  AR     ++A+TS   S ++   D+
Sbjct: 95  TDALHGDIGIVGPNDVLVLFSKSGTTEELLRLVPCARAKGAYMVAVTSLRNSQLSNVCDM 154

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLF 217
            + LP + E CP  LAP TS  +Q+  GD +AIAL++++  +   + + HP G++G  L 
Sbjct: 155 HVYLPLDRELCPFDLAPVTSTAIQMLFGDTVAIALMQAKKLTREQYALNHPAGRIGKRLI 214

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               DVM   D +PL K    ++D +  L+ K  GC+ VVDE   L G  T+GD+ R   
Sbjct: 215 FRVQDVMKRHDELPLCKENDLIMDQLMELTSKGCGCLLVVDEECHLIGTFTDGDLRRALK 274

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHF 332
              + +  L+V ++  +NP+ I  D +   AMQ +      +  L +V++    IGIV  
Sbjct: 275 SIREGVFKLTVGEMCNRNPRTIGPDAMAIEAMQKMESPPSPVQFLPIVNNDNVVIGIVTL 334

Query: 333 LDLLRFGI 340
             L+  G+
Sbjct: 335 HGLVSAGL 342


>gi|329942540|ref|ZP_08291350.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
           Cal10]
 gi|332287172|ref|YP_004422073.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
 gi|313847768|emb|CBY16758.1| conserved hypothetical protein [Chlamydophila psittaci RD1]
 gi|325506892|gb|ADZ18530.1| carbohydrate isomerase [Chlamydophila psittaci 6BC]
 gi|328815450|gb|EGF85438.1| sugar isomerase, KpsF/GutQ family protein [Chlamydophila psittaci
           Cal10]
 gi|328914417|gb|AEB55250.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila psittaci
           6BC]
          Length = 329

 Score =  276 bits (705), Expect = 5e-72,   Method: Composition-based stats.
 Identities = 103/329 (31%), Positives = 168/329 (51%), Gaps = 10/329 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             +++      +  ++  L     S Q E ++      EKI   +G +  +G+GKSG I 
Sbjct: 4   PTTSIDLCQDIVSKQRESLERFFDSFQCEDTWVLA---EKILNHQGSIFFSGVGKSGCIA 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL S G  + F+ + +  HGDLG++   D++ + S SG + EL   + Y +   +
Sbjct: 61  RKIVATLQSFGERALFLASGDLLHGDLGVVRPGDIVCLFSKSGETRELLECIPYLKERGV 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +  ITS   S +A   D V+ LP   E  P  L PTTS   QL  GD LAI LL SR  
Sbjct: 121 FIAGITSATYSSLAVLCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLAITLLRSRQI 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S  D+   HPGG++G  +     D M     +P       + D++ I S    GCV +V+
Sbjct: 181 SLADYGKNHPGGQIGLKVIGKIRDYMFPKTEVPFCSPEDTIADSLDIFSSYGCGCVCIVN 240

Query: 259 EGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNI 314
           E  ++ GI T+GD+ R+  +   D+ +  ++DVM  NP+VI ED  + + +Q++     +
Sbjct: 241 EKFEILGIFTDGDLRRSLTRHGGDILSQRLKDVMTPNPRVISEDADVLLGLQMMETGSPV 300

Query: 315 SVLMVVD--DCQKAIGIVHFLDLLRFGII 341
           ++L VVD  D +  +G++    L + G+I
Sbjct: 301 TILPVVDAKDQKYVVGLLQMHTLAKAGLI 329


>gi|297521537|ref|ZP_06939923.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 256

 Score =  275 bits (704), Expect = 7e-72,   Method: Composition-based stats.
 Identities = 109/247 (44%), Positives = 154/247 (62%), Gaps = 5/247 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + HPGG LG    +  +D+MH+GD IP VK    L DA+  ++ K  G   + D+   +
Sbjct: 190 ALSHPGGALGRKLLLRVNDIMHTGDEIPHVKKTASLRDALLEVTRKNLGMTVICDDNMMI 249

Query: 264 KGIITEG 270
           +GI T+G
Sbjct: 250 EGIFTDG 256


>gi|260911762|ref|ZP_05918335.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 472 str.
           F0295]
 gi|260634121|gb|EEX52238.1| arabinose 5-phosphate isomerase [Prevotella sp. oral taxon 472 str.
           F0295]
          Length = 273

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 101/267 (37%), Positives = 165/267 (61%), Gaps = 4/267 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++TG+GKSG+IG+K+A+TL+STGTP+FF++  +  HGDLG++T DD+++ LS SG +DE
Sbjct: 1   MIVTGVGKSGNIGAKIAATLSSTGTPAFFINPLDVYHGDLGVMTADDVVLALSNSGQTDE 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   +       +PLI ++    S++A ++   +T+  + E+CP  LAPT+S    LA+G
Sbjct: 61  LLRFIPAILHRGVPLIGMSRNPNSLLAKYSVAHITVKVDKEACPLNLAPTSSTTAALAMG 120

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
           DALA+AL++ RNF   DF   HPGG+LG   +  +  +   D +P++     L DAI  +
Sbjct: 121 DALAVALMQVRNFKPTDFARFHPGGELGKRLLTTAADVMRVDDLPVIPRQMHLGDAIIHV 180

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLT 303
           S+ + G    V E  K+ G+IT+GDI R   K        +V D+M  NPK++   T + 
Sbjct: 181 SKGKLGLGVSV-EDGKIVGLITDGDIRRAMEKWQAEFFNKTVNDIMTTNPKIVSPTTKIA 239

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIV 330
              Q+++++ I  ++V D+  + +GIV
Sbjct: 240 DIQQIMQKYKIHTVLVADEDARLVGIV 266


>gi|88808099|ref|ZP_01123610.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 7805]
 gi|88788138|gb|EAR19294.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 7805]
          Length = 347

 Score =  275 bits (703), Expect = 9e-72,   Method: Composition-based stats.
 Identities = 99/296 (33%), Positives = 157/296 (53%), Gaps = 10/296 (3%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
             +E+    K ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDLG++  DD+
Sbjct: 51  ALLERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDALHGDLGVVAPDDV 110

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            ++LS SG + EL  +L + +R     IA+     S +A  +D+VL    + E CP  LA
Sbjct: 111 CLLLSNSGETAELLEVLPHLKRRGTARIALVGRADSSLARGSDVVLDASVDREVCPLNLA 170

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLV 233
           PT S  + +AIGDALA   +E R  S  DF + HP G LG    +  +D+M     +P +
Sbjct: 171 PTASTAVAMAIGDALAAVWMERRGISSADFALNHPAGALGKQLTMTVADLMIPVAQLPSI 230

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFH----KDLNTLSVED 287
               PL D I  L++   G   V D     +L G+IT+GD+ R       +    L+  +
Sbjct: 231 TPTTPLPDVIGRLTQGAIGSGWVEDPAQPGRLLGLITDGDLRRALRDHGPERWPALTAGE 290

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +M  +P  +  D L   A+Q +  +    ISVL VVD+     G++   DL++ G+
Sbjct: 291 LMTADPITVSADILAVEAIQRMEHNRRKPISVLPVVDEHDGLHGLLRLHDLVQAGL 346


>gi|237750770|ref|ZP_04581250.1| arabinose-5-phosphate isomerase [Helicobacter bilis ATCC 43879]
 gi|229373860|gb|EEO24251.1| arabinose-5-phosphate isomerase [Helicobacter bilis ATCC 43879]
          Length = 323

 Score =  274 bits (702), Expect = 1e-71,   Method: Composition-based stats.
 Identities = 108/314 (34%), Positives = 176/314 (56%), Gaps = 8/314 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +++  E   L +    L           +  I  +KG++V+ G+GKSG +  K+++TL+S
Sbjct: 12  QTLHDEGNALLAYSGDLGD-----LDSIIRLIINMKGKLVLIGVGKSGLVAQKISATLSS 66

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTPS F+H  EA HGDLG++ +DD ++ +S+SG S+E+ AIL + RR  +P+I ++   
Sbjct: 67  TGTPSIFLHPTEAMHGDLGVLQKDDCVLAISYSGESEEIVAILPHIRRMGLPIITMSKSK 126

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           KS ++   D  L L  E E+CP   APTTS  + LA+GD+LA+ L+ +R FS++DF   H
Sbjct: 127 KSRMSMLGDYFLPLIIEREACPLQTAPTTSTTLTLALGDSLAVCLMRARGFSKSDFASFH 186

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG LG +       +    ++PL+     L DAI++++  R G    VD   KL G+++
Sbjct: 187 PGGSLGRMLFIKVSDIMQTQNLPLLDTAMSLRDAISVMTNGRLGNAFFVDSNHKLLGVLS 246

Query: 269 EGDIFRNF-HKDLN-TLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +GD+ R    KD +   S      KNPK +     L   A++++    I +L ++     
Sbjct: 247 DGDLRRAMFDKDFSLESSAFSYATKNPKALYDSGMLAFDALKIIEDSKIQILPILTQEGV 306

Query: 326 AIGIVHFLDLLRFG 339
             G++H  DL++ G
Sbjct: 307 LEGVIHMHDLIQAG 320


>gi|254444269|ref|ZP_05057745.1| sugar isomerase, KpsF/GutQ family [Verrucomicrobiae bacterium
           DG1235]
 gi|198258577|gb|EDY82885.1| sugar isomerase, KpsF/GutQ family [Verrucomicrobiae bacterium
           DG1235]
          Length = 326

 Score =  273 bits (699), Expect = 2e-71,   Method: Composition-based stats.
 Identities = 107/327 (32%), Positives = 161/327 (49%), Gaps = 4/327 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +    R +  E   L +   SL    + Q    + +  A   +++++G+GK+ H
Sbjct: 1   METPEIIAKGQRCLDIEIAALHATRDSLDARFA-QVVSLLHQTLARGNKLILSGVGKNAH 59

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KL  TL STG PS F+   +A HGDLG+  + D ++  S SG + EL   L   +RF
Sbjct: 60  ICQKLVGTLNSTGAPSTFLDPVQALHGDLGLCRQRDTVVAFSNSGETAELLRFLPMVQRF 119

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +  IA+T++  S +A   D  L    E E+CP  LAPT S    LAIGDA+A+ LLE  
Sbjct: 120 DVQTIAVTAKPDSSLAKMCDATLLYAIEREACPLELAPTASTTASLAIGDAVAMVLLELN 179

Query: 198 NFSENDFYVLHPGGKLGTLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
             +  DF   HPGG LG +      ++M S   +  +K      D +  +S K  GCVA+
Sbjct: 180 ALTREDFAKFHPGGALGRVLAPKVEEIMRSTKRLAALKKDATCKDCLAEMSAKSSGCVAL 239

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           ++    L GI+T+GDI R    H +        VM   P  I   +    A++   +H+I
Sbjct: 240 LETDGTLAGIMTDGDIRRYILSHPNFLESPASSVMTPKPITIAGGSYAAQALKTFEKHSI 299

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGII 341
             L+VVD   + IGI+   DL +  I+
Sbjct: 300 DDLIVVDSSNRPIGIIDGQDLTKLRIV 326


>gi|224082832|ref|XP_002306858.1| predicted protein [Populus trichocarpa]
 gi|222856307|gb|EEE93854.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score =  273 bits (699), Expect = 3e-71,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 166/317 (52%), Gaps = 14/317 (4%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L +L  S Q  L++ F            + +    G +  +G+GKSG + +K++ TL S 
Sbjct: 25  LLNLFKSQQNHLNYFFQNLNLSQALTFTQTLLNCNGTIFFSGVGKSGFVANKISQTLISL 84

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  + F+   +A HGD+G ++  D++++ S SG+++EL  ++  A+     L+++TS   
Sbjct: 85  GIRAGFLSPVDALHGDIGALSSSDILVLFSKSGNTEELLRLVPCAKAKGAYLVSVTSVEG 144

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           + +    D+ + LP E E CP  LAP TS  +Q+  GD +AIAL+ +RN S+ ++   HP
Sbjct: 145 NALTAVCDMNVHLPLERELCPFDLAPVTSTAIQMVFGDTVAIALMGARNLSKEEYAANHP 204

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G++G        DVM   + +P+ K G  ++D +  L+ K  GC+ V+DE   L G  T
Sbjct: 205 AGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQLVELTSKGCGCLLVIDEDSHLIGTFT 264

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDC 323
           +GD+ R      + +  L+V ++  +NP+ I  D +   AM+ +      +  L V+ D 
Sbjct: 265 DGDLRRTLKASGEGIFKLTVGEMCNRNPRTIGPDAMAVEAMKKMESPPSPVQFLPVIKDD 324

Query: 324 QKAIGIVHFLDLLRFGI 340
              IGIV    L+  G+
Sbjct: 325 NILIGIVTLHGLVSAGL 341


>gi|302767924|ref|XP_002967382.1| hypothetical protein SELMODRAFT_86704 [Selaginella moellendorffii]
 gi|300165373|gb|EFJ31981.1| hypothetical protein SELMODRAFT_86704 [Selaginella moellendorffii]
          Length = 328

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 174/317 (54%), Gaps = 14/317 (4%)

Query: 38  LSSLESSLQGELSFQF--------HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           +  L       L F F            +   A +G +  +G+GKSG+I  K++ TL ST
Sbjct: 12  IKQLFEEQHKYLDFFFANLDYAQIQAFTDLCLAAEGVIFFSGVGKSGYIAQKISQTLVST 71

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GT S F++  +A HGD+GM+   DL+++LS SG+++EL  ++   R     ++ I+S   
Sbjct: 72  GTKSVFLNPTDALHGDIGMVGSKDLVVLLSKSGATEELLRLVPCLRARGAFVVGISSLLN 131

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S ++   D+ + LP E E CP  LAP TS  +Q+  GD +AIAL++++N +  ++ + HP
Sbjct: 132 SQLSRVCDMHVHLPLERELCPFDLAPVTSTAIQMLFGDTVAIALMQAKNLTREEYALNHP 191

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G++G  L     DVM  GD +PL K    +++ +  LS K  GC+ VVD+ ++L G  T
Sbjct: 192 AGRIGKRLIFRVRDVMKKGDELPLCKENDLIMEQLLELSAKGCGCLLVVDDNRQLLGTFT 251

Query: 269 EGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMVVDDC 323
           +GD+ R      +++  L+V ++  ++P+    + +   AMQ++      ++ L VVD+ 
Sbjct: 252 DGDLRRALKSKREEVFKLTVGEMCNRSPRKTTANAMAVDAMQIMEGPPSPVTFLPVVDET 311

Query: 324 QKAIGIVHFLDLLRFGI 340
              IGIV   DL+  G+
Sbjct: 312 GIVIGIVKLHDLVSAGL 328


>gi|116617911|ref|YP_818282.1| sugar phosphate isomerase [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227432200|ref|ZP_03914197.1| possible arabinose-5-phosphate isomerase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|116096758|gb|ABJ61909.1| Sugar phosphate isomerase with CBS domains [Leuconostoc
           mesenteroides subsp. mesenteroides ATCC 8293]
 gi|227352044|gb|EEJ42273.1| possible arabinose-5-phosphate isomerase [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 320

 Score =  272 bits (696), Expect = 6e-71,   Method: Composition-based stats.
 Identities = 103/317 (32%), Positives = 164/317 (51%), Gaps = 10/317 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A ++   E   L+ ++SSL       F  AV+KI + KGRV+  GIGKSG I  K+A+
Sbjct: 8   EDAKKTFDVEIEALTRVKSSL----GKSFDEAVDKILSTKGRVIFIGIGKSGIIADKIAA 63

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP---L 141
           + +S G  SF++ A  A HGDLG ++ DD++I +S SG + E+   L   +         
Sbjct: 64  SFSSVGLASFYIDAGTAYHGDLGRVSSDDVVIFISNSGETQEVLQALSALQNIHNNELAT 123

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T    S +A + DIVL++    E+    LAPT+S    L +GDAL +A+  ++ F  
Sbjct: 124 IAMTGSEDSTLAKNTDIVLSIDVAEEADITKLAPTSSTTATLVMGDALLVAIETAKEFDR 183

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F + HPGG +G + +              V +   + + I  +S+   G   V DE +
Sbjct: 184 ESFAMYHPGGSIGKILLQNVKNSMHTKIPY-VHVDTSINEVIYRISDYGIGITLVKDEQE 242

Query: 262 KLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            + GIIT+GDI + F     +   + +D M +    I ED     A + +  +NIS L+V
Sbjct: 243 NVIGIITDGDIRKKFLNISKVKGSTAKDYMTQGFISISEDKRNREAWRKMANYNISNLVV 302

Query: 320 VDDCQKAIGIVHFLDLL 336
           +D  +K +G+V   D+L
Sbjct: 303 LDKDKKVVGVVTIHDVL 319


>gi|330752411|emb|CBL87362.1| sugar phosphate isomerase, KpsF/GutQ family protein [uncultured
           Flavobacteria bacterium]
          Length = 321

 Score =  272 bits (695), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 122/323 (37%), Positives = 192/323 (59%), Gaps = 8/323 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S ++ A      +   ++++ S L       F   ++ I    G+++ITGIGKS  I  
Sbjct: 5   SSILRTANLVFANQSEAINNMSSIL----DDNFLSVIKLINNSNGKLIITGIGKSAIIAM 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+++TL STGT S F+HA++A HGD G+I  DD+++ +S SGS+ E+K  +   +     
Sbjct: 61  KISATLNSTGTKSVFIHASDALHGDSGIIDMDDVVLFISKSGSTKEIKNFVEIVKTNGNK 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            IA+TS  KS ++   D+VL +  E ES P+ L PTTS   QL +GD +AI L++   F 
Sbjct: 121 TIALTSNKKSFLSNKVDLVLNIDIEKESDPYNLVPTTSTTTQLVLGDTIAICLMKLNEFK 180

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ENDF   HP G LG +       + S D  P VKI   + + IT ++ K  G  AV+ E 
Sbjct: 181 ENDFAKFHPSGSLGKMLSLKIKQLVSNDKRPNVKIDSKISEIITEITTKLVGATAVI-ED 239

Query: 261 QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +K+ GIIT+GD+ R     K+L++++ +++M  NPK +  D L   A+++LR++NI+  +
Sbjct: 240 EKVIGIITDGDVRRIIEKNKNLSSITAKNIMNSNPKKVQCDILAKHALEILRKNNINQ-I 298

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           +V+D +K IGIVH  D+L+ GII
Sbjct: 299 IVEDKKKYIGIVHIHDILKEGII 321


>gi|302753812|ref|XP_002960330.1| hypothetical protein SELMODRAFT_75684 [Selaginella moellendorffii]
 gi|300171269|gb|EFJ37869.1| hypothetical protein SELMODRAFT_75684 [Selaginella moellendorffii]
          Length = 328

 Score =  271 bits (694), Expect = 8e-71,   Method: Composition-based stats.
 Identities = 104/317 (32%), Positives = 175/317 (55%), Gaps = 14/317 (4%)

Query: 38  LSSLESSLQGELSFQF--------HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           +  L       L F F            +   A +G V  +G+GKSG+I  K++ TL ST
Sbjct: 12  IKQLFEEQHKYLDFFFANLDYAQIQAFTDLCLAAEGVVFFSGVGKSGYIAQKISQTLVST 71

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           GT S F++  +A HGD+GM+   DL+++LS SG+++EL  ++   R     ++ I+S   
Sbjct: 72  GTKSVFLNPTDALHGDIGMVGSKDLVVLLSKSGATEELLRLVPCLRARGAFVVGISSLLN 131

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S ++   D+ + LP E E CP  LAP TS  +Q+ +GD +AIAL++++N +  ++ + HP
Sbjct: 132 SQLSRVCDMHVHLPLERELCPFDLAPVTSTAIQMLLGDTVAIALMQAKNLTREEYALNHP 191

Query: 210 GGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G++G  L     DVM  GD +PL K    +++ +  LS K  GC+ VVD+ ++L G  T
Sbjct: 192 AGRIGKRLIFRVRDVMKKGDELPLCKENDLIMEQLLELSAKGCGCLLVVDDNRQLLGTFT 251

Query: 269 EGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMVVDDC 323
           +GD+ R      +++  L+V ++  ++P+    + +   AMQ++      ++ L VVD+ 
Sbjct: 252 DGDLRRALKSKREEVFKLTVGEMCNRSPRKTTANAMAVDAMQIMEGPPSPVTFLPVVDET 311

Query: 324 QKAIGIVHFLDLLRFGI 340
              IGIV   DL+  G+
Sbjct: 312 GIVIGIVKLHDLVSAGL 328


>gi|62184858|ref|YP_219643.1| hypothetical protein CAB215 [Chlamydophila abortus S26/3]
 gi|62147925|emb|CAH63672.1| conserved hypothetical protein [Chlamydophila abortus S26/3]
          Length = 329

 Score =  271 bits (694), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 102/329 (31%), Positives = 167/329 (50%), Gaps = 10/329 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             +++      +  ++  L     + Q E ++      EKI   +G +  +G+GKSG I 
Sbjct: 4   PTTSIDLCQDIVSKQRESLERFFGAFQCEDTWVLA---EKILHHQGSIFFSGVGKSGCIA 60

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+ +TL S G  + F+ + +  HGDLG++   D++ + S SG + EL   + Y +   +
Sbjct: 61  RKIVATLQSFGEHALFLASGDLLHGDLGVVRPGDIVCLFSKSGETRELLECIPYLKERGV 120

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +  ITS   S +A   D V+ LP   E  P  L PTTS   QL  GD LAI LL SR  
Sbjct: 121 FIAGITSATYSSLAVLCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLAITLLRSRQI 180

Query: 200 SENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S  D+   HPGG++G  +     D M     +P       + D++ I S    GCV +V+
Sbjct: 181 SLADYGKNHPGGQIGLKVIGKIRDYMFLKTEVPFCSPEDTIADSLDIFSSYGCGCVCIVN 240

Query: 259 EGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNI 314
           E  ++ GI T+GD+ R   +   D+ +  ++DVM  NP+VI ED  + + +Q++     +
Sbjct: 241 EKFEILGIFTDGDLRRALARHGGDILSQRLQDVMTPNPRVISEDADVLLGLQMMETGSPV 300

Query: 315 SVLMVVD--DCQKAIGIVHFLDLLRFGII 341
           ++L VVD  D +  +G++    L + G+I
Sbjct: 301 TILPVVDAKDQKYVVGLLQMHTLAKAGLI 329


>gi|255348764|ref|ZP_05380771.1| carbohydrate isomerase [Chlamydia trachomatis 70]
 gi|255503304|ref|ZP_05381694.1| carbohydrate isomerase [Chlamydia trachomatis 70s]
 gi|255506983|ref|ZP_05382622.1| carbohydrate isomerase [Chlamydia trachomatis D(s)2923]
 gi|289525441|emb|CBJ14918.1| carbohydrate isomerase [Chlamydia trachomatis Sweden2]
 gi|296434993|gb|ADH17171.1| carbohydrate isomerase [Chlamydia trachomatis E/150]
 gi|296438713|gb|ADH20866.1| carbohydrate isomerase [Chlamydia trachomatis E/11023]
          Length = 328

 Score =  271 bits (693), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 162/295 (54%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 35  HQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 93

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 94  IVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLEELDPFNL 153

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D  +    +P 
Sbjct: 154 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYFYPRTEVPF 213

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++  LS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 214 CSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
            +NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 274 TRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 328


>gi|320101686|ref|YP_004177277.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
 gi|319748968|gb|ADV60728.1| KpsF/GutQ family protein [Isosphaera pallida ATCC 43644]
          Length = 381

 Score =  271 bits (692), Expect = 1e-70,   Method: Composition-based stats.
 Identities = 105/328 (32%), Positives = 165/328 (50%), Gaps = 9/328 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K         ++ A R +  E   L  +   L   L        +++ + +  V + G+G
Sbjct: 27  KDRPFTDAEALEFARRVVRIEAATLERVADRLDEGL----VRVADRLGSGRALVFVLGVG 82

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSG +G KLA+TLASTGT +F +H AEA HGDLG +   D+ ++LS SG ++EL  I+  
Sbjct: 83  KSGLVGEKLAATLASTGTRAFPLHPAEALHGDLGRVREGDVALLLSASGETEELLKIVPP 142

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     L+AIT   +S +A  AD  + L    E+CP GLAP+ +    +A+GDALA+ +
Sbjct: 143 LKALGAVLVAITCHERSALARKADERIILGPIEEACPLGLAPSATTTAMMAVGDALALLV 202

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL--SEKRF 251
              R F    F   HPGG LG       +VM SG  + + +      + +  L  + +R 
Sbjct: 203 SRCRGFDARGFVKFHPGGALGRKLTRVEEVMRSGPHVRIARESEITREVLVRLGGASRRA 262

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G + +VD+   L GI T+ D+ R F +    L    + + M + P +I     L  A+  
Sbjct: 263 GAILIVDDRGVLTGIFTDSDLARLFERQRDYLLERPIVEAMTRAPSLIRAGRSLAEALDA 322

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+   +S L V+D+  + IG++   DLL
Sbjct: 323 LQARKLSELPVIDEAGRPIGLIDVTDLL 350


>gi|224066237|ref|XP_002302040.1| predicted protein [Populus trichocarpa]
 gi|118483855|gb|ABK93818.1| unknown [Populus trichocarpa]
 gi|222843766|gb|EEE81313.1| predicted protein [Populus trichocarpa]
          Length = 341

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 95/340 (27%), Positives = 172/340 (50%), Gaps = 13/340 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
              S   K   + + + +        +++  L+    +L    +  F    + +    G 
Sbjct: 9   DLPSPNAKSQQIDQTTLLNLFK----SQQNHLNYFFRNLDLSQTLTFT---QTLLHCNGT 61

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +  +G+GKSG + +K++ TL S G  + F+   +A HGD+G ++  D++++ S SG+++E
Sbjct: 62  IFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGNTEE 121

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  A+     L+++TS   + +    D+ + LP E E CP  LAP TS  +Q+  G
Sbjct: 122 LLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQMVFG 181

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           D +AIAL+ +RN S+ ++   HP G++G        DVM   + +P+ K G  ++D +  
Sbjct: 182 DTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQLVE 241

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLL 302
           L+ K  GC+ V+DE   L G  T+GD+ R      + +  L+V ++  +NP+ I  D + 
Sbjct: 242 LTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPDAMA 301

Query: 303 TVAMQLLRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             AM+ +      +  L V+ D    IGIV    L+  G+
Sbjct: 302 VEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>gi|15605124|ref|NP_219909.1| GutQ/KpsF family sugar-P isomerase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76789130|ref|YP_328216.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           trachomatis A/HAR-13]
 gi|237802824|ref|YP_002888018.1| carbohydrate isomerase [Chlamydia trachomatis B/Jali20/OT]
 gi|255311205|ref|ZP_05353775.1| carbohydrate isomerase [Chlamydia trachomatis 6276]
 gi|255317506|ref|ZP_05358752.1| carbohydrate isomerase [Chlamydia trachomatis 6276s]
 gi|7388411|sp|O84404|Y399_CHLTR RecName: Full=Uncharacterized protein CT_399
 gi|3328826|gb|AAC67996.1| GutQ/KpsF Family Sugar-P Isomerase [Chlamydia trachomatis
           D/UW-3/CX]
 gi|76167660|gb|AAX50668.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           A/HAR-13]
 gi|231274058|emb|CAX10852.1| carbohydrate isomerase [Chlamydia trachomatis B/Jali20/OT]
 gi|296435920|gb|ADH18094.1| carbohydrate isomerase [Chlamydia trachomatis G/9768]
 gi|296436846|gb|ADH19016.1| carbohydrate isomerase [Chlamydia trachomatis G/11222]
 gi|296437780|gb|ADH19941.1| carbohydrate isomerase [Chlamydia trachomatis G/11074]
 gi|297140280|gb|ADH97038.1| carbohydrate isomerase [Chlamydia trachomatis G/9301]
          Length = 328

 Score =  270 bits (691), Expect = 2e-70,   Method: Composition-based stats.
 Identities = 96/295 (32%), Positives = 163/295 (55%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 35  HQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 93

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 94  IVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLEELDPFNL 153

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++    +P 
Sbjct: 154 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPF 213

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++  LS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 214 CSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
            +NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 274 TRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 328


>gi|297748529|gb|ADI51075.1| Carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           D-EC]
 gi|297749409|gb|ADI52087.1| Carbohydrate isomerase, KpsF/GutQ family [Chlamydia trachomatis
           D-LC]
          Length = 331

 Score =  269 bits (689), Expect = 3e-70,   Method: Composition-based stats.
 Identities = 96/295 (32%), Positives = 163/295 (55%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 38  HQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 96

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 97  IVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLEELDPFNL 156

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++    +P 
Sbjct: 157 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPF 216

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++  LS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 217 CSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 276

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
            +NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 277 TRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 331


>gi|89898595|ref|YP_515705.1| sugar-phosphate isomerase-like protein [Chlamydophila felis
           Fe/C-56]
 gi|89331967|dbj|BAE81560.1| sugar-phosphate isomerase-like protein [Chlamydophila felis
           Fe/C-56]
          Length = 329

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 100/327 (30%), Positives = 167/327 (51%), Gaps = 10/327 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + V      +  +K  L     + + E ++      EKI   +G V  +G+GKSG I  K
Sbjct: 6   TAVDLCQDIVAKQKESLERFFETFRCEGTWLLA---EKILHHQGSVFFSGVGKSGCIARK 62

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +TL S G  + F+ + +  HGDLG++   D++ + S SG + E+   + Y +   + +
Sbjct: 63  VVATLQSFGERALFLPSGDLLHGDLGLVQHGDIVCLFSKSGETREILEWIPYLKERGVFI 122

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           + ITS   S +A   D V+ LP   E  P  L PTTS   QL  GD L+I LL SR  S 
Sbjct: 123 VGITSAAYSSLAILCDHVVILPMIEELDPFNLVPTTSTTCQLLFGDLLSITLLRSRGISL 182

Query: 202 NDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            D+   HPGG++G  +     D M     +P       + D++ + S    GCV VV+E 
Sbjct: 183 ADYGKNHPGGQIGLKVIGKIRDYMFPKTEVPFCSPENTIADSLDVFSSYGCGCVCVVNEK 242

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISV 316
            ++ G+ T+GD+ R   +   ++ +  +++VM  NP+VI ED  + + +Q++     I++
Sbjct: 243 FEILGVFTDGDLRRALSRHGGEILSQQLKNVMTPNPRVIREDADVILGLQMMETGSPITI 302

Query: 317 LMVVD--DCQKAIGIVHFLDLLRFGII 341
           L VVD  D +  +G++    L + G+I
Sbjct: 303 LPVVDAKDQRYVVGLLQMHTLAKAGLI 329


>gi|255582507|ref|XP_002532039.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
           communis]
 gi|223528309|gb|EEF30355.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
           communis]
          Length = 340

 Score =  269 bits (689), Expect = 4e-70,   Method: Composition-based stats.
 Identities = 100/320 (31%), Positives = 173/320 (54%), Gaps = 14/320 (4%)

Query: 35  KRGLSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           +  L +L  S Q  L++ F            + +   +G ++ TG+GKSG + +K++ TL
Sbjct: 21  QNTLLNLFKSQQNHLNYFFQNLDISQTLSFTQTLLNSRGTILFTGVGKSGFVANKISQTL 80

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            S G  + F+   +A HGD+G++T  D++++ S SG++DEL  ++  A+     L+++TS
Sbjct: 81  VSLGIRAGFLSPVDALHGDIGILTPRDILVMFSKSGNTDELLRLVPCAKAKGAFLVSVTS 140

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              + +A  +D+ + LP E E CP  LAP TS  +Q+  GD +AIAL+ +RN S++++  
Sbjct: 141 VEGNALAMVSDMNVYLPLERELCPFDLAPVTSTAIQMVFGDTIAIALMGARNLSKDEYAA 200

Query: 207 LHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HP G++G        DVM   D +P+ K G  ++D +  L+ +  GC+ V+DE   L G
Sbjct: 201 NHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSRGCGCLLVIDEEYHLIG 260

Query: 266 IITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVV 320
             T+GD+ R      + +  L+V ++  +NP+ I  D +   AM+ +      +  L V+
Sbjct: 261 TFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPDAMAVEAMKKMESPPSPVQFLPVI 320

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D     IGIV    L+  G+
Sbjct: 321 DQKNIVIGIVTLHGLVSAGL 340


>gi|166154610|ref|YP_001654728.1| carbohydrate isomerase [Chlamydia trachomatis 434/Bu]
 gi|301335877|ref|ZP_07224121.1| carbohydrate isomerase [Chlamydia trachomatis L2tet1]
 gi|165930598|emb|CAP04095.1| carbohydrate isomerase [Chlamydia trachomatis 434/Bu]
          Length = 328

 Score =  269 bits (688), Expect = 5e-70,   Method: Composition-based stats.
 Identities = 99/295 (33%), Positives = 164/295 (55%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 35  HQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 93

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 94  IVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLEELDPFDL 153

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++    +P 
Sbjct: 154 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPF 213

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++ ILS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 214 CSPLTTVAESLPILSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
            +NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 274 TRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 328


>gi|237804746|ref|YP_002888900.1| carbohydrate isomerase [Chlamydia trachomatis B/TZ1A828/OT]
 gi|231273046|emb|CAX09959.1| carbohydrate isomerase [Chlamydia trachomatis B/TZ1A828/OT]
          Length = 328

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 96/295 (32%), Positives = 162/295 (54%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G +  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 35  HQLTEKLLCHQGSLFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 93

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   + L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 94  IVCLFSNSGETREILEWIPHLKNRPVFLVGITAAPCSSLAAFSDFVIVLPKLEELDPFNL 153

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++    +P 
Sbjct: 154 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPF 213

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++  LS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 214 CSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
             NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 274 THNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 328


>gi|166155485|ref|YP_001653740.1| carbohydrate isomerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
 gi|165931473|emb|CAP07049.1| carbohydrate isomerase [Chlamydia trachomatis L2b/UCH-1/proctitis]
          Length = 328

 Score =  269 bits (687), Expect = 7e-70,   Method: Composition-based stats.
 Identities = 98/295 (33%), Positives = 163/295 (55%), Gaps = 8/295 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           H   EK+   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGDLG+++  D
Sbjct: 35  HQLTEKLLCHQGSVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGDLGVVSPGD 93

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++ + S SG + E+   + + +   I L+ IT+   S +A  +D V+ LPK  E  P  L
Sbjct: 94  IVCLFSNSGETREILEWIPHLKNRPIFLVGITAAPCSSLAAFSDFVVVLPKLEELDPFDL 153

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPL 232
            PTTS   QL   D LA+ LL  R  S +D+   HP G++G        D ++    +P 
Sbjct: 154 MPTTSTTCQLLFSDLLAMTLLRCRKISLSDYGSNHPSGQIGLKANGKVKDYLYPRTEVPF 213

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
                 + +++  LS   +GCV VV+E  +L GI T+GD+ R   +   D+    ++ +M
Sbjct: 214 CSPLTTVAESLPTLSSYGYGCVCVVNELFELLGIFTDGDLRRGLSEYGGDILAYPLQQIM 273

Query: 290 IKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRFGII 341
            +NPKVI ED+ + ++++++   + ++VL VVD  Q+   +G++H   L R G++
Sbjct: 274 TRNPKVISEDSDVLLSLEMMESGNPVTVLPVVDAQQQRFIVGLLHMHALARAGLL 328


>gi|78211735|ref|YP_380514.1| KpsF/GutQ family protein [Synechococcus sp. CC9605]
 gi|78196194|gb|ABB33959.1| KpsF/GutQ family protein [Synechococcus sp. CC9605]
          Length = 337

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 98/307 (31%), Positives = 161/307 (52%), Gaps = 10/307 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L  +        +++    K ++VITG+GKSG +  K+A+T +S G  + F++  +A H
Sbjct: 30  RLSSDQVEAALALLDRCANRKAKLVITGVGKSGIVARKIAATFSSIGLMALFLNPTDALH 89

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++  +D+ ++LS SG + EL  +L +  R     IAI     S +A  +D+VL   
Sbjct: 90  GDLGVVAAEDVCLLLSNSGETTELLEVLPHLTRRGTGRIAIVGRADSSLARGSDVVLEAS 149

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASD 222
            + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG      ASD
Sbjct: 150 VDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTLTASD 209

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF---- 276
           +M     +  ++   PL + I  L+    G   V +      L GI+T+GD+ R      
Sbjct: 210 LMVPASQLHPLQPHTPLPEVIGGLTRDGIGSGWVENPDSPGSLLGILTDGDLRRALQDHG 269

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFL 333
            +    L+ +D+M  +P  +  D L+  A++ + ++    ISVL VV+  ++ +G++   
Sbjct: 270 AETWTHLTAKDLMTADPITVQTDVLVVKALEQMERNRRKPISVLPVVNQDKQLMGLLRLH 329

Query: 334 DLLRFGI 340
           DL++ G+
Sbjct: 330 DLVQAGL 336


>gi|15835294|ref|NP_297053.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Nigg]
 gi|270285467|ref|ZP_06194861.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Nigg]
 gi|270289478|ref|ZP_06195780.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum Weiss]
 gi|301336864|ref|ZP_07225066.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydia
           muridarum MopnTet14]
 gi|14195468|sp|Q9PJZ7|Y679_CHLMU RecName: Full=Uncharacterized protein TC_0679
 gi|7190713|gb|AAF39499.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydia muridarum Nigg]
          Length = 328

 Score =  268 bits (686), Expect = 8e-70,   Method: Composition-based stats.
 Identities = 100/303 (33%), Positives = 163/303 (53%), Gaps = 13/303 (4%)

Query: 51  FQFHCAV-----EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
             FHC V     E++   +G V  +GIGKSG I  KL +T+ S G  +FF+ + +  HGD
Sbjct: 27  ANFHCDVVRQLTERLLCHQGAVFFSGIGKSGCIARKLVATMQSFGEKAFFL-SGDLLHGD 85

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           LG+++  D++ + S SG + E+   + + +   + L+ ITS   S +A  +D V+ LPK 
Sbjct: 86  LGVVSSGDIVCLFSNSGETREILEWIPHLKNRQVFLVGITSSPCSSLAVFSDFVVMLPKL 145

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVM 224
            E  P  L PTTS   QL   D LA+ +L  R  S +D+   HP G++G        D +
Sbjct: 146 EELDPFNLIPTTSTTCQLLFSDLLAMTVLRCRKISLSDYGKNHPSGQIGLKANGKVRDYL 205

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LN 281
                +P       + +A+T+LS   +GCV VV+E  +L GI T+GD+ R   +    + 
Sbjct: 206 SPRTEVPFCSPSITVSEALTVLSSYGYGCVCVVNEQFELLGIFTDGDLRRGLSECGGAIL 265

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLMVVDDCQK--AIGIVHFLDLLRF 338
              +E VM + PKVI ED+ + + ++++   + ++VL VVD   +   +G++H   L R 
Sbjct: 266 ECPLEQVMTRKPKVISEDSDVLLGLEMMESGNPVTVLPVVDAQHQRFIVGLLHMHTLARA 325

Query: 339 GII 341
           G++
Sbjct: 326 GLL 328


>gi|87301993|ref|ZP_01084827.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 5701]
 gi|87283561|gb|EAQ75516.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 5701]
          Length = 332

 Score =  268 bits (685), Expect = 9e-70,   Method: Composition-based stats.
 Identities = 96/322 (29%), Positives = 160/322 (49%), Gaps = 10/322 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +  E   +++    L  E        +++    + ++VITG+GKSG +  K+A+T +S
Sbjct: 6   RCLQEEAAAIAAAAGRLDAEQVDAALVLLDRCADQRAKLVITGVGKSGIVARKIAATFSS 65

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  + +++  +A HGDLG++  +D++++LS SG + EL  IL + RR     IA+    
Sbjct: 66  IGLMALYLNPLDALHGDLGVVAPEDVVLLLSNSGETQELLEILPHLRRRGTGRIALVGRV 125

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A   ++VL    + E CP  LAPT S  + +AIGDALA   +E R  S  DF + H
Sbjct: 126 ASSLARGCEVVLDGSVDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNH 185

Query: 209 PGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKG 265
           P G LG        D+M     +  ++ G  L + I  L+    G   V   D    L G
Sbjct: 186 PAGALGKQLTLTVGDLMVPTAKLHPLEEGASLSEVIAGLTGDGVGACWVRRADNDSLLAG 245

Query: 266 IITEGDIFRNFHKD----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLM 318
           +IT+GD+ R   +        L   D+M  +P  +  D L   A++ + ++    I VL 
Sbjct: 246 LITDGDLRRALEQHAPAAWGELRATDLMTIDPITVAADLLAVEALERMERNRRKPIGVLP 305

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V+ +    +G++   DL++ G+
Sbjct: 306 VLGEGGPMLGLLRLHDLVQAGL 327


>gi|307105754|gb|EFN54002.1| hypothetical protein CHLNCDRAFT_136008 [Chlorella variabilis]
          Length = 369

 Score =  268 bits (685), Expect = 1e-69,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 173/344 (50%), Gaps = 39/344 (11%)

Query: 35  KRGLSSLESSLQGELSFQF--------HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
              LS L    Q  +++ F            +     KG ++ITG+GKSG I  KL  TL
Sbjct: 27  ADSLSQLFRRQQRYINYFFDNLDFGPIQQFCQACLDCKGVIIITGVGKSGFIAQKLCQTL 86

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            STGT + F+   +A HGD+G+I R DL++  S SG+++EL  ++ +AR     L++ITS
Sbjct: 87  VSTGTKAVFLSPQDALHGDIGIIGRQDLLVCFSKSGATEELIRLVPFARAKGARLVSITS 146

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +  S +    D+ + LP E E CP  LAP TS  +Q+  GD  AIAL+++ + + + + +
Sbjct: 147 QPGSELEAVCDLAVHLPLERELCPFDLAPVTSTAIQMVFGDTAAIALMQANHLTRDQYAM 206

Query: 207 LHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HP G++G   +   +DVM S   +P+V     + + +  L+ K  GCV V DE  +L G
Sbjct: 207 NHPAGRIGKRLILRVADVMISNGKVPVVPPSTLMPEVLVELTSKGCGCVLVADEELRLVG 266

Query: 266 IITEGDIFRNFH----------------------------KDLNTLSVEDVMIKNPKVIL 297
           I T+GD+ R                               +D+  L V++VM + PK   
Sbjct: 267 IFTDGDLRRTLQQASWGAAPAEGRGLALGSLQRAGCGAEGRDVMGLRVDEVMCEEPKTCG 326

Query: 298 EDTLLTVAMQLLRQH-NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + +   AM ++ +   +++L VVDD  +  G+V    L+  G+
Sbjct: 327 SEEMAVDAMHVMEEAPKVAMLPVVDD-GRLRGLVTLHALVSAGL 369


>gi|32476096|ref|NP_869090.1| hypothetical protein RB9823 [Rhodopirellula baltica SH 1]
 gi|32446640|emb|CAD76476.1| conserved hypothetical protein [Rhodopirellula baltica SH 1]
          Length = 419

 Score =  266 bits (680), Expect = 4e-69,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 168/320 (52%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++    +++ E   +           S     A   I   +G +V+TG+GK+G I  KL 
Sbjct: 69  IRLVRETMLREAEAI----QKAAAIASADAAEAAAWISRCEGSIVLTGVGKAGLIAQKLV 124

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P+ F+H  EA HGDLG +   DL+I  S SG S+E+  ++ Y +  +  +IA
Sbjct: 125 ATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIAFSNSGRSEEVVRVVEYLKHQACGIIA 184

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T++ ++ +A  AD V+ + +  E+CP GLAPT+S  + LA+GDA+A+       F+ ND
Sbjct: 185 VTADRENPLAELADHVVPIGRHREACPDGLAPTSSTSVMLAVGDAIAVLASRLCGFTPND 244

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQK 262
           F   HPGG LG         M       L      + +A+ I  + +R G + ++DE ++
Sbjct: 245 FARFHPGGALGRKLTDVRQAMRPLAECRLAPQTISIREAMMIGGAGRRSGAILLLDESER 304

Query: 263 LKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L GI T+ D+ R       T     +E  M K P  I +D  L  A+++L Q  IS L V
Sbjct: 305 LAGIFTDSDLARLLQHRQETSLDEPIELFMTKQPICIADDERLPRAVEILSQRKISELPV 364

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           VD   + IG++   DL+  G
Sbjct: 365 VDSDHRPIGMIDITDLVATG 384


>gi|182412453|ref|YP_001817519.1| KpsF/GutQ family protein [Opitutus terrae PB90-1]
 gi|177839667|gb|ACB73919.1| KpsF/GutQ family protein [Opitutus terrae PB90-1]
          Length = 328

 Score =  265 bits (679), Expect = 5e-69,   Method: Composition-based stats.
 Identities = 113/329 (34%), Positives = 170/329 (51%), Gaps = 4/329 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +L   S ++ A   I  E   L+     L  E       AV    A   +++ TG+GK+
Sbjct: 1   MALSPKSILRRARTCIRLEGDALAKTADGLGSEFVDT-VAAVRATIAAGRKLIFTGVGKN 59

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            H+  KL  T  STG  + F+ A +A HGDLG+    DL ++LS SG ++E+  +L   +
Sbjct: 60  AHVAQKLTGTFNSTGVTATFLDATQALHGDLGLCAEGDLALLLSNSGQTEEILRLLPVLK 119

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  + L+A T    S +A + D  L      E+CP  LAPT S    LA+GDALA+ LLE
Sbjct: 120 RQGVTLVAFTQHADSDLAKNCDHRLLYRVPREACPLSLAPTASTTAALALGDALAMVLLE 179

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R  + +DF  LHP G LG L + A D+M + D +P+ +      DAI  ++  R G +A
Sbjct: 180 ERGVTRDDFARLHPAGNLGALLLKARDIMRTADRLPVARETVSTQDAILAMTRARAGSIA 239

Query: 256 VVD-EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           +V  +  KL GI+T+GD  R      D     V   M +NPKVI E+ L   A++L   +
Sbjct: 240 LVHPKSGKLTGILTDGDFRRAALTGPDFLQKPVATFMTRNPKVIAENALGVDALRLFEAY 299

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I  L+V++   + +G++   DL +  I+
Sbjct: 300 KIDDLIVINAQYRPVGLIDGQDLPKLKIV 328


>gi|149196518|ref|ZP_01873572.1| Sugar isomerase, KpsF/GutQ family protein [Lentisphaera araneosa
           HTCC2155]
 gi|149140198|gb|EDM28597.1| Sugar isomerase, KpsF/GutQ family protein [Lentisphaera araneosa
           HTCC2155]
          Length = 323

 Score =  265 bits (678), Expect = 6e-69,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 181/323 (56%), Gaps = 4/323 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +  A + +  E +G+ S+   L    + QF     K    K ++V++GIGKSG I  K
Sbjct: 2   DYLPQARQVLDIESKGIQSIADQLDERFN-QFISICLKALKNKNKLVLSGIGKSGQIAQK 60

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           +ASTL+STG+ + F+H  EA HGDLGM+  DD+ I LS+SG +DEL  ++   +R  + +
Sbjct: 61  MASTLSSTGSRAVFIHPVEAMHGDLGMMYDDDVFIGLSYSGETDELLKVIPAVKRLGLEV 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +++T    S +   + I L    + E+CP  LAPTT+    LA+GDA+A+ L++   F  
Sbjct: 121 LSLTGNVDSSLGKSSSISLPCKIDSEACPFNLAPTTTTTAMLALGDAIAMVLMDIHEFKI 180

Query: 202 NDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           ND+  LHP G +G        D+M +GD + +++    + +A+  + + + G   + ++ 
Sbjct: 181 NDYGKLHPSGAIGRAITLTVDDLMRTGDRVAVIEPDTLVQEAVLAMCKSKGGMSIISNQD 240

Query: 261 QKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           + L GI T GD+ R   KDL+ L   V ++M+K+P  + +  +    + +LR+ NI+ + 
Sbjct: 241 KDLLGIFTTGDLKRGIAKDLDFLKRKVSEIMVKSPIKLNKSQMAVDILDILREKNINAIP 300

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD   K  G++   DL +F ++
Sbjct: 301 VVDQDDKVCGVIDIQDLPKFKVM 323


>gi|327539397|gb|EGF26013.1| KpsF/GutQ family protein [Rhodopirellula baltica WH47]
          Length = 388

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 169/320 (52%), Gaps = 8/320 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++    +++ E   +           S     A   I   +G +V+TG+GK+G I  KL 
Sbjct: 38  IRLVRETMLREAEAI----QKAAAIASADAAEAAAWISRCEGSIVLTGVGKAGLIAQKLV 93

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTG+P+ F+H  EA HGDLG +   DL+I LS SG S+E+  ++ Y +  +  +IA
Sbjct: 94  ATLASTGSPAHFLHPIEAVHGDLGRVQSKDLVIALSNSGRSEEVVRVVEYLKHQACGIIA 153

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T++ ++ +A  AD V+ + +  E+CP GLAPT+S  + LA+GDA+A+       F+ ND
Sbjct: 154 VTADRENPLAELADHVVPIGRHREACPDGLAPTSSTSVMLAVGDAIAVLASRLCGFTPND 213

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQK 262
           F   HPGG LG         M       L      + +A+ I  + +R G + ++DE ++
Sbjct: 214 FARFHPGGALGRKLTDVRQAMRPLAECRLAPQTISIREAMMIGGAGRRSGAILLLDESER 273

Query: 263 LKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           L GI T+ D+ R       T     +E  M K P  I +D  L  A+++L Q  IS L V
Sbjct: 274 LAGIFTDSDLARLLQHRQETSLDEPIELFMTKQPICIADDERLPRAVEILSQRKISELPV 333

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           VD   + IG++   DL+  G
Sbjct: 334 VDSDHRPIGMIDITDLVATG 353


>gi|168701145|ref|ZP_02733422.1| hypothetical protein GobsU_16589 [Gemmata obscuriglobus UQM 2246]
          Length = 344

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 103/318 (32%), Positives = 163/318 (51%), Gaps = 9/318 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A R + AE   L      + G L   F+   + + A +GRV + G+GKS  IG K  
Sbjct: 8   LAYARRVLRAEAASL----DVVAGRLDDGFNRVADVLLACRGRVAVIGVGKSADIGQKTV 63

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
            TL STGT ++ + A  A HGDLG +  DD+ ++LS SG S+EL  ++   ++ +  ++A
Sbjct: 64  GTLNSTGTRAYTLDATRAVHGDLGSVHPDDVALLLSHSGESEELIRLIAPLKKLAAGVLA 123

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A   D  +      E+CP  LAP++S  + LA+GDALA  L+E R F+ ++
Sbjct: 124 ITGSAASTLARAVDAAVVYGPVIEACPLNLAPSSSTTVMLALGDALAFTLVEQRQFTADE 183

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL--SEKRFGCVAVVDEGQ 261
           F   HP G LG      S+ M  GD + +      + +    +  + +R G + + D   
Sbjct: 184 FATFHPAGSLGRKLAVVSEWMRRGDELRVAPETDTVREVFAKVRHTGRRTGAIMLTDAAG 243

Query: 262 KLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +L G+ T+ D+ R F    + L    +  VM + P VI  +  +TVA+  L+    S L 
Sbjct: 244 RLSGLFTDSDLARLFENREDRLLDSPIAAVMTRAPVVIGPEVRVTVALDALKARKFSELP 303

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD   + IG++   DL+
Sbjct: 304 VVDADGRPIGMLDITDLI 321


>gi|168042963|ref|XP_001773956.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674800|gb|EDQ61304.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 347

 Score =  265 bits (677), Expect = 8e-69,   Method: Composition-based stats.
 Identities = 94/308 (30%), Positives = 166/308 (53%), Gaps = 9/308 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
                +L  +    F          KG +  +G+GKSG +  K A TL STGT + F+  
Sbjct: 43  DHFFKNLNYKEVQAFTQLC---ADTKGVIFFSGVGKSGFVAQKCAQTLVSTGTKAVFLSP 99

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +A HGD+G++  +D++++ S SG+++EL  ++  AR  S  L+ I+S   S      D+
Sbjct: 100 TDALHGDIGLVGPNDVLVLFSKSGATEELNKLIPCARAKSAYLVGISSLKHSNFRKMCDM 159

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-F 217
            + LP E E CP  LAP TS  +Q+   D +AIAL++++N +   + + HP G++G    
Sbjct: 160 HVYLPLERELCPFDLAPVTSTAIQMLFCDTVAIALMKAKNLTREQYALNHPAGRIGRRLS 219

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               D+M  GDS+PL +    ++D +  L+ K +GC+ V+D   +L G  T+GD+ R  +
Sbjct: 220 FRVEDIMRKGDSLPLCRESDLIMDQLVELTVKGYGCLIVIDASNRLLGTFTDGDLRRALN 279

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDCQKAIGIVHF 332
              +++  L V ++  + P+ I E+ +   AM+ + +    ++ L V+D  +  IG++  
Sbjct: 280 SSRENIFHLQVGEMCNREPRWIEENVMAIAAMKKMEEGASAVTFLPVLDYNKVVIGLITL 339

Query: 333 LDLLRFGI 340
            DL+  G+
Sbjct: 340 HDLVSAGL 347


>gi|225438103|ref|XP_002277616.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 340

 Score =  264 bits (675), Expect = 2e-68,   Method: Composition-based stats.
 Identities = 98/319 (30%), Positives = 168/319 (52%), Gaps = 16/319 (5%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L +L  + Q  L+F FH           + +  I+G +  TG+GKSG +  K++ TL S 
Sbjct: 22  LMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTIFFTGVGKSGFVAQKISQTLVSL 81

Query: 90  GTPSFFVHAAEASHGDLGMITRD--DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           G  + F+   +A HGD+G+++    + ++  S SG+S+EL  +   A+     LI++TS 
Sbjct: 82  GIRASFLSPVDALHGDIGILSGGTSNAVVFFSKSGNSEELLKLAPCAKAKGAYLISVTST 141

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             +++    D+ + LP E E CP  LAP TS  +Q+  GD +A+AL+ +RN + +++   
Sbjct: 142 EDNLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVFGDTVAVALMGARNLTRDEYAAN 201

Query: 208 HPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HP G++G        DVM   D +P+ K G  ++D +  L+ K  GC+ V+D+  +L G 
Sbjct: 202 HPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEYRLIGT 261

Query: 267 ITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVD 321
            T+GD+ R      + +  L+V  +  +NP+ I  + +   AM+ +      +  L V+D
Sbjct: 262 FTDGDLRRTLKASGEGIFKLTVGQMCNRNPRTISSNVMAVDAMRRMEAPPSPVQFLPVLD 321

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           D    IGIV    L+  G+
Sbjct: 322 DQNVLIGIVTLHGLVSAGL 340


>gi|148241383|ref|YP_001226540.1| polysialic acid capsule expression protein [Synechococcus sp.
           RCC307]
 gi|147849693|emb|CAK27187.1| Polysialic acid capsule expression protein [Synechococcus sp.
           RCC307]
          Length = 341

 Score =  263 bits (672), Expect = 3e-68,   Method: Composition-based stats.
 Identities = 95/321 (29%), Positives = 166/321 (51%), Gaps = 10/321 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +  E + L +  + L+ + +      ++       ++V+TG+GKSG +  K+A+T  S 
Sbjct: 7   VLQQEAQALLNTAAQLRPDQAEAALDLLQHCSEQGAKLVVTGVGKSGIVARKIAATFTSI 66

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  + +++  +A HGDLG++  +D++++LS SG S EL A+L +  R     IA+T    
Sbjct: 67  GLMALYLNPLDALHGDLGVVGAEDVVLLLSNSGESSELLALLPHLHRRGSACIALTGRLD 126

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S +A  A +VL    + E CP  LAPT S  + +AIGDALA   ++ +  ++ DF V HP
Sbjct: 127 SSLARGAQVVLDGSVDREVCPLNLAPTASTAVAMAIGDALAAVWMQRQGITQADFAVNHP 186

Query: 210 GGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGI 266
            G LG       +D+M   D+ P +     L + +  L+    G   V   D+ ++L G+
Sbjct: 187 AGSLGRQLTLSVADLMVPIDTCPPLPPDAALPEVVDQLTGALAGAAWVQQPDQPKRLLGL 246

Query: 267 ITEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMV 319
           IT+GD+ R       +   ++   D+M  +P     D L   A++L+ ++    ISVL V
Sbjct: 247 ITDGDLRRALRTHSPQAWASIQAADLMTTDPITAAPDQLAVAALELMERNRRKSISVLPV 306

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
                + +G++   DL++ G+
Sbjct: 307 QAVSGELVGLLRLHDLVQAGL 327


>gi|330444236|ref|YP_004377222.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pecorum
           E58]
 gi|328807346|gb|AEB41519.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pecorum
           E58]
          Length = 329

 Score =  262 bits (670), Expect = 6e-68,   Method: Composition-based stats.
 Identities = 99/332 (29%), Positives = 163/332 (49%), Gaps = 12/332 (3%)

Query: 19  MKNST--VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M +S   +      +  +K  L        GE   +     E+I    G +  +G+GKSG
Sbjct: 1   MSSSAVFIDICHEILNKQKDALDEFFKIFHGE---EVAKLAERILHHSGWIFFSGVGKSG 57

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           ++  K+ +TL S    + F+   +  HGD+G++   D++ + S SG + EL   L Y + 
Sbjct: 58  YVARKIVATLQSLSERALFLSHGDLLHGDIGVVQEGDIVCLFSKSGETQELLDSLPYLKT 117

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             + L+AITS   S +A  AD V+ LP  PE  P  L PTTS   Q+  GD LA+ LL+ 
Sbjct: 118 RGVTLVAITSSPYSSLAISADFVVVLPVVPELDPFDLIPTTSTTCQMLFGDLLAMMLLQG 177

Query: 197 RNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R  + + +   HP GK+G        D M     +P       + D + I S    GCV 
Sbjct: 178 RGVTLSTYGENHPSGKIGLKAKGRVRDYMFPKTEVPFCAPEDTVHDTLEIFSSYGCGCVC 237

Query: 256 VVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           VV    +L GI T+GD+ R       ++ +L++++VM   P+V+  +  +T A+Q++   
Sbjct: 238 VVTPNYELLGIFTDGDLRRALAHYGGEVLSLALKEVMTARPRVVEREADVTTALQIMEAR 297

Query: 313 N-ISVLMVVDD--CQKAIGIVHFLDLLRFGII 341
           N I+ L VV++      +G++H   L + G++
Sbjct: 298 NPITALPVVNNITQNSVVGLLHVHTLAKAGLL 329


>gi|241895148|ref|ZP_04782444.1| possible arabinose-5-phosphate isomerase [Weissella
           paramesenteroides ATCC 33313]
 gi|241871644|gb|EER75395.1| possible arabinose-5-phosphate isomerase [Weissella
           paramesenteroides ATCC 33313]
          Length = 320

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 106/325 (32%), Positives = 164/325 (50%), Gaps = 13/325 (4%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +   +    A  +   E   L  +      EL   F   VE+I    GR++   IGKSG 
Sbjct: 1   MQMKTYYNDAKETFNTEITALEKVRD----ELDESFDQVVEEILDTTGRLIFIAIGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K+A++ +S G  SFF+ A  A HGDLG ++ DDL+  +S SG + E+    +  ++ 
Sbjct: 57  IAEKIAASFSSIGVSSFFIDAGNAFHGDLGRVSADDLVFFVSNSGETQEVIQTFFALKQI 116

Query: 138 ---SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
               +  +A+T  + S +A ++   L +    E+    LAPT+S    L +GDAL IA+ 
Sbjct: 117 FGDDLKTVALTGASDSTLAQNSTYPLIVDVAVEADTTKLAPTSSTTATLVVGDALLIAVQ 176

Query: 195 ESRNFSENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           + + F+ +DF + HPGG +G  L     +VMH+   IP V I  P+ D I  +S+   G 
Sbjct: 177 KEKEFTRDDFALYHPGGSIGKLLLQTVKNVMHT--KIPYVNINTPINDVIYRISDFGVGM 234

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
             V DE  K  GI+T+GDI +   +   +   +  D M K    I  D   +VA + +  
Sbjct: 235 TLVKDEDGKAVGIVTDGDIRKKMLQVSMVKKSTAADYMTKGFISIDVDKRNSVAWKKMAS 294

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLL 336
           HNIS L VV+D  + +GI+   D+L
Sbjct: 295 HNISNL-VVEDDGEVVGIITIHDVL 318


>gi|227509706|ref|ZP_03939755.1| possible arabinose-5-phosphate isomerase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227190856|gb|EEI70923.1| possible arabinose-5-phosphate isomerase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 317

 Score =  261 bits (667), Expect = 1e-67,   Method: Composition-based stats.
 Identities = 100/319 (31%), Positives = 161/319 (50%), Gaps = 13/319 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A     +EK+ L      +   L   F   V  I    GRV+  GIGKS  I  K+++
Sbjct: 5   ELAQDIFESEKQAL----DEVSQRLDEHFDDLVNMINETTGRVIFIGIGKSEIIAEKISA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR---RFSIPL 141
           +L+S G  SF + AA A HGDLG + ++D ++++S SG + E+   L+  +      I  
Sbjct: 61  SLSSIGQSSFTIDAATAFHGDLGRLAKNDTVLLVSNSGETQEVVQTLFAMKTIFPNGIST 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +A+T    S +A + D+V+ L  + E+   GLAPT+S    L +GDAL +AL + R+F +
Sbjct: 121 VALTGNPNSTLAKNTDLVINLSVKKEADVTGLAPTSSTTATLVLGDALLVALEKIRSFDK 180

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-E 259
             F   HPGG +G +       VMH+   IP V+    + D I  +S    G   V D E
Sbjct: 181 KQFAQYHPGGSIGKMLLQQVKHVMHT--KIPYVEEDTKINDVIYTISNFGLGITLVRDIE 238

Query: 260 GQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++ GI+T+GDI + F     +   +  D M +    I ++     A +++   NIS L
Sbjct: 239 TNQITGIVTDGDIRKKFLDVPAVKRSTARDYMTRGFVSINQEKRNRDAWRMMASRNISNL 298

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +V D+    +G++   D+L
Sbjct: 299 IVRDNDDHVVGVITIHDVL 317


>gi|254431317|ref|ZP_05045020.1| polysialic acid capsule synthesis protein KpsF [Cyanobium sp. PCC
           7001]
 gi|197625770|gb|EDY38329.1| polysialic acid capsule synthesis protein KpsF [Cyanobium sp. PCC
           7001]
          Length = 344

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 96/312 (30%), Positives = 157/312 (50%), Gaps = 16/312 (5%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L  +        +E  +  + ++V+TG+GKSG +  K+A+T +S G  + F++  +A H
Sbjct: 24  RLDSQQVEATLELLESCRQRRAKLVVTGVGKSGIVARKIAATFSSIGLTAVFLNPVDALH 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++  DD+ ++LS SG ++EL AIL + +R     IA+    +S +A   D+VL   
Sbjct: 84  GDLGIVAADDVTLLLSNSGETEELLAILPHLKRRGTSRIALVGRVESSLARGCDLVLDAA 143

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASD 222
            + E CP  LAPT S  + +AIGDALA   +E    S  DF + HP G LG        D
Sbjct: 144 VDREVCPLNLAPTASTAVAMAIGDALAAVWMERAGISPVDFAINHPAGSLGRRLTLTVGD 203

Query: 223 VMHSGDSIPLVKIGCPLIDAITILS-----EKRFGCVAVVDEG-QKLKGIITEGDIFRNF 276
           +M     I  +     L   I  L+         G   V      +L G+IT+GD+ R  
Sbjct: 204 LMVPAGEIEPLHPEARLPVVIAHLTQGSPGRGSLGASWVHGSDPSQLAGLITDGDLRRTL 263

Query: 277 HK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVV--DDCQKAI 327
            +    D + ++  ++   +P  +  D L   A++L+ ++    ISV+ VV  DD ++  
Sbjct: 264 QRHGPGDWDRITAAEMATTDPITVTPDVLAAEALELMERNRRQAISVMPVVSPDDPRRLE 323

Query: 328 GIVHFLDLLRFG 339
           G++   DL++ G
Sbjct: 324 GLLRLHDLVQAG 335


>gi|293333190|ref|NP_001170584.1| hypothetical protein LOC100384615 [Zea mays]
 gi|238006162|gb|ACR34116.1| unknown [Zea mays]
          Length = 378

 Score =  260 bits (665), Expect = 2e-67,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 165/320 (51%), Gaps = 13/320 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
             A++R L      L    +  F      +    G V  TG+GKSG +  K A TLAS G
Sbjct: 62  FSAQRRHLDHFFDRLDMSQAAAFAQV---LLDAPGAVFFTGVGKSGIVARKTAQTLASLG 118

Query: 91  T-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
              + F+   +A HGD+G +   D++++LS SG+SDEL A++  AR     L+++TS   
Sbjct: 119 FARAGFLAPVDALHGDIGALFPGDVLVLLSKSGASDELLALVPCARAKGGYLVSVTSAAS 178

Query: 150 S---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + +  
Sbjct: 179 GADCPLAAACDLNVHLPLQGEVCPFGLAPVTSTAIQMVFGDTVIAAIMEARRLSRDQYAS 238

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HP GK+G TL     DVM   + +PL K G  ++D +T L+ K  GC+ VVDE   L G
Sbjct: 239 NHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDEEHHLIG 298

Query: 266 IITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVV 320
             T+GD+ R        + +L+V ++  +NP+ I  D +   AM+ +      +  L VV
Sbjct: 299 TFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTITADAMAVEAMEKMESPPSPVQFLPVV 358

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +D     GI+    L+  G+
Sbjct: 359 NDNNVVCGIITLHGLVSAGL 378


>gi|269303402|gb|ACZ33502.1| sugar isomerase, KpsF/GutQ family [Chlamydophila pneumoniae LPCoLN]
          Length = 329

 Score =  260 bits (664), Expect = 3e-67,   Method: Composition-based stats.
 Identities = 94/294 (31%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
              EKI    G V  +G+GKSG +  KL +TL S    + F    +  HGDLG+++  D+
Sbjct: 36  QLAEKILGHSGWVFFSGVGKSGCVARKLVATLQSLSERALFFSPVDLLHGDLGLVSPGDI 95

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           + + S SG + EL   + + +     L+AITS   S +A  +D+V+ LP   E  P  L 
Sbjct: 96  VCLFSKSGETQELLDTVPHLKSRGAILVAITSMPYSNLAALSDLVVILPSVAELDPFNLI 155

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLV 233
           PT S   Q+  GD LA+ L  SR  S + +   HP G++G        D M     +P  
Sbjct: 156 PTNSTTCQMIFGDFLAMLLFHSRGVSLSTYGKNHPSGQVGMKANGKVKDFMFPKTEVPFC 215

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
            +G  +  ++ + S    GCV +VD   +L GI T+GD+ R+      ++ +LS++ VM 
Sbjct: 216 HLGDKVSFSLEVFSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLDKVMT 275

Query: 291 KNPKVILEDTLLTVAMQLLR-QHNISVLMVVD--DCQKAIGIVHFLDLLRFGII 341
            NP+ I ED+ + +A+QL+     ++VL V+D  + +   G++H   L + G++
Sbjct: 276 ANPRCITEDSDIAIALQLMESSSPVAVLPVLDNEENRHVTGLLHMHTLAKAGLL 329


>gi|115444351|ref|NP_001045955.1| Os02g0158300 [Oryza sativa Japonica Group]
 gi|50251251|dbj|BAD28031.1| putative polysialic acid capsule expression protein [Oryza sativa
           Japonica Group]
 gi|50252181|dbj|BAD28176.1| putative polysialic acid capsule expression protein [Oryza sativa
           Japonica Group]
 gi|113535486|dbj|BAF07869.1| Os02g0158300 [Oryza sativa Japonica Group]
 gi|125538157|gb|EAY84552.1| hypothetical protein OsI_05923 [Oryza sativa Indica Group]
          Length = 344

 Score =  259 bits (662), Expect = 4e-67,   Method: Composition-based stats.
 Identities = 108/318 (33%), Positives = 164/318 (51%), Gaps = 13/318 (4%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-T 91
           A++R L      L    +  F  A   +    G V  TG+GKSG +  KLA TLAS G T
Sbjct: 30  AQRRHLDHFFDRLDLSQAAAFAQA---LVDAPGAVFFTGVGKSGIVARKLAQTLASLGFT 86

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS- 150
            + F+   +A HGD+G +   DL+++LS SG+SDEL A+   AR     LI++TS     
Sbjct: 87  RAGFLSPVDALHGDIGSVFPGDLLVLLSKSGASDELLALAPCARAKGAHLISLTSAASGA 146

Query: 151 --VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
              +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + +   H
Sbjct: 147 DCPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEARRLSRDQYASNH 206

Query: 209 PGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           P GK+G        DVM   + +PL K G  ++D +T L+ K  GC+ VVD+   L G  
Sbjct: 207 PAGKIGKSLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDDEYHLIGTF 266

Query: 268 TEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDD 322
           T+GD+ R      + +  L+V ++  ++P+ I  D +   AM+ +      +  L VVD 
Sbjct: 267 TDGDLRRTLKASGQAIFNLTVGEMCNRHPRTITADAMAVQAMEKMESPPSPVQFLPVVDS 326

Query: 323 CQKAIGIVHFLDLLRFGI 340
                GI+    L+  G+
Sbjct: 327 NNVVCGIITLHGLVSAGL 344


>gi|168058158|ref|XP_001781077.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667474|gb|EDQ54103.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 319

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 98/318 (30%), Positives = 171/318 (53%), Gaps = 8/318 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            +    +KR L      +       F    + +   KG +  +GIGKSG I  K+  TL 
Sbjct: 5   RQLFAEQKRYLDYFFDHIDYSQLQNFT---QLLLECKGVIFFSGIGKSGFIAQKICQTLV 61

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           STGT S F+    A HGD+G++   D+++V S SG+++EL  ++   R     ++ ++S 
Sbjct: 62  STGTKSVFLSPTNALHGDIGIVGPKDIVVVFSKSGATEELLKLVPCVRAKGAYIVGVSSH 121

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           N+S+VA   D+ + LP E E CP  LAP TS  +Q+  GD +AIAL++++N +  ++ + 
Sbjct: 122 NESMVAEFCDMHVYLPLERELCPFDLAPVTSTAIQMLFGDTVAIALMQAKNLTREEYAMN 181

Query: 208 HPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           HP G++G        DVM  G  +P+ +    +I+ +  LS +  GC+ VVD  ++L G 
Sbjct: 182 HPAGRIGKRLTLRVQDVMKKGADLPICRESDLMIEQLVELSARGCGCLLVVDSAKRLVGT 241

Query: 267 ITEGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDD 322
            T+GD+ R+ H   + +  ++V ++  ++P+ IL D + + AM  + Q   +  L +V+ 
Sbjct: 242 FTDGDLRRSLHPFAETIFKVTVRELCNRSPRTILVDAMASEAMTRMEQQPVVEFLPIVNH 301

Query: 323 CQKAIGIVHFLDLLRFGI 340
               +G+V    L+  G+
Sbjct: 302 ANILVGLVTLRGLVAAGL 319


>gi|32491076|ref|NP_871330.1| hypothetical protein WGLp327 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166283|dbj|BAC24473.1| yrbH [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 327

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 104/320 (32%), Positives = 173/320 (54%), Gaps = 7/320 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +    + +  EK G+  L+  +  +    F    E +    G++   GIGKSGHI  K
Sbjct: 11  DFIYYGKQVLDLEKNGICKLKKCINRD----FQKIGELLLKCNGKIATMGIGKSGHIARK 66

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L+ST +STG+PSFF+H  EA HGDLG +  +D++I +S SG S E+ +++YY   F+I  
Sbjct: 67  LSSTFSSTGSPSFFIHPTEAGHGDLGSLCSNDIVIAISNSGESKEIISLIYYLNNFNITY 126

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+IT    S ++  + I L++    E+C  GL+PTTS+   L +GDALAI+L  ++ F+ 
Sbjct: 127 ISITGNPLSTMSKLSKINLSIKVTKEACSLGLSPTTSSTAALVMGDALAISLSIAKGFNI 186

Query: 202 NDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +F  LHPGG LG       +D+M     +P+V     + D I  +++K FG   +++  
Sbjct: 187 KNFSFLHPGGILGKKLSLRVNDIMRKKIDVPIVYSTYSIFDTIVKITKKNFGIAVILNNN 246

Query: 261 QKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + +KG+    ++ + +  +LN   S+  VM  N   I  D L+  A ++++      L+V
Sbjct: 247 KTIKGVFNFKNLKKIYKLNLNLNDSISTVMNINFNQINPDILVEKAFKIMQSIKTDYLLV 306

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
                   GI+H  D+ ++G
Sbjct: 307 -SIKNYFSGIIHINDIKKYG 325


>gi|15618437|ref|NP_224722.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae
           CWL029]
 gi|15836057|ref|NP_300581.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae J138]
 gi|16752515|ref|NP_444777.1| carbohydrate isomerase KpsF/GutQ family protein [Chlamydophila
           pneumoniae AR39]
 gi|33241878|ref|NP_876819.1| KpsF [Chlamydophila pneumoniae TW-183]
 gi|7388417|sp|Q9Z826|Y526_CHLPN RecName: Full=Uncharacterized protein
           CPn_0526/CP_0226/CPj0526/CpB0547
 gi|4376815|gb|AAD18666.1| GutQ/KpsF Family Sugar-P Isomerase [Chlamydophila pneumoniae
           CWL029]
 gi|7189153|gb|AAF38092.1| carbohydrate isomerase, KpsF/GutQ family [Chlamydophila pneumoniae
           AR39]
 gi|8978897|dbj|BAA98732.1| GutQ/KpsF family sugar-P isomerase [Chlamydophila pneumoniae J138]
 gi|33236388|gb|AAP98476.1| KpsF [Chlamydophila pneumoniae TW-183]
          Length = 329

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 95/294 (32%), Positives = 153/294 (52%), Gaps = 7/294 (2%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
              EKI    G V  +G+GKSG +  KL +TL S    + F    +  HGDLG+++  D+
Sbjct: 36  QLAEKILGHSGWVFFSGVGKSGCVARKLVATLQSLSERALFFSPVDLLHGDLGLVSPGDI 95

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           + + S SG + EL   + + +     L+AITS   S +A  +D+V+ LP   E  P  L 
Sbjct: 96  VCLFSKSGETQELLDTVPHLKSRRAILVAITSMPYSNLAALSDLVVILPSVAELDPFNLI 155

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLV 233
           PT S   Q+  GD LA+ L  SR  S + +   HP G++G        D M     +P  
Sbjct: 156 PTNSTTCQMIFGDFLAMLLFHSRGVSLSTYGKNHPSGQVGMKANGKVKDFMFPKTEVPFC 215

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
            +G  +  ++ + S    GCV +VD   +L GI T+GD+ R+      ++ +LS+E VM 
Sbjct: 216 HLGDKVSFSLEVFSAYGCGCVCIVDPQFRLMGIFTDGDLRRSLASYGGEVLSLSLEKVMT 275

Query: 291 KNPKVILEDTLLTVAMQLLR-QHNISVLMVVD--DCQKAIGIVHFLDLLRFGII 341
            NP+ I ED+ + +A+QL+     ++VL V+D  + +   G++H   L + G++
Sbjct: 276 ANPRCITEDSDIAIALQLMESSSPVAVLPVLDNEENRHVTGLLHMHTLAKAGLL 329


>gi|281358384|ref|ZP_06244866.1| KpsF/GutQ family protein [Victivallis vadensis ATCC BAA-548]
 gi|281315211|gb|EFA99242.1| KpsF/GutQ family protein [Victivallis vadensis ATCC BAA-548]
          Length = 325

 Score =  259 bits (661), Expect = 6e-67,   Method: Composition-based stats.
 Identities = 108/298 (36%), Positives = 169/298 (56%), Gaps = 4/298 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + ++ A      E  GL ++  +L G         +E +   +G+++ TGIGKSG+I
Sbjct: 1   MTKTVLERAREVFDTEIEGLQAVRDNLNGSFEELVARCMETLSN-EGKLIFTGIGKSGYI 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TL+S G+PS F+H  EA HGDLGMI + DL+I LS+SG ++EL  +L  A+R  
Sbjct: 60  GKKIAATLSSVGSPSVFMHPVEARHGDLGMIQKHDLLIALSYSGETEELLVVLNPAKRLG 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L AIT+   S +   +D+V+ +P   E+CP  LAPTT+    LA+GDALA+ LL+ + 
Sbjct: 120 VQLAAITASAGSTLGRMSDLVVEMPVPQEACPFNLAPTTTTTALLALGDALAMVLLDRQG 179

Query: 199 FSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+++D+  LHPGG +G +    A D+M   +   +V     + DA+  +S  R G   VV
Sbjct: 180 FTKSDYGRLHPGGAIGRMVTLRAMDIMRDLEHTAIVPPEAKVRDALYRMSHARCGSAIVV 239

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
               +L GI T+GD  R   KD++ L   + +VM   P  +  + L    ++ L   +
Sbjct: 240 APDNRLLGIFTDGDFRRWCEKDMSVLERLMSEVMTPKPVTVKAEQLAVEVLKTLETRH 297


>gi|116491321|ref|YP_810865.1| sugar phosphate isomerase [Oenococcus oeni PSU-1]
 gi|116092046|gb|ABJ57200.1| Sugar phosphate isomerase with CBS domains [Oenococcus oeni PSU-1]
          Length = 317

 Score =  258 bits (660), Expect = 7e-67,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 159/319 (49%), Gaps = 13/319 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A      E   L+++   L      +F   V+ I    GR+V  GIGKS  I  K+++
Sbjct: 5   EIARDIFAKESAELANVAKRL----DDKFDKLVDLINDTNGRIVFIGIGKSQIIAEKISA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR---RFSIPL 141
           +L+S    SF V A  A HGDLG I+ DDL+I +S SG + E+   L+  +      +  
Sbjct: 61  SLSSVSIHSFTVDAGTAYHGDLGRISDDDLLIFVSNSGETQEVVQTLFALQTIYPKGLKT 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +++T    S +A +  +   L    E+   GLAPT+S    L  GDAL  A+ +S +F+ 
Sbjct: 121 VSLTGNLDSTLATNTGLAFDLGVSKEADTTGLAPTSSTTATLVFGDALLAAMEKSISFNR 180

Query: 202 NDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           N F + HPGG +G  L      VMH  + +P V    P+ + I  +S+   G   V D+ 
Sbjct: 181 NQFALYHPGGTIGKLLLQRVKHVMH--EKVPYVNEDTPINEVIYQISDYGIGMTLVKDKD 238

Query: 261 -QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K  GI+T+GDI + F   + +      D M K    I ++     A QL+  H IS L
Sbjct: 239 SGKAIGIVTDGDIRKKFLSVQSVKKSVASDYMTKGFVSINQEKRNRTAWQLMANHGISNL 298

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +V+D+ +K +G+V   D+L
Sbjct: 299 VVIDNDEKVVGVVTIHDVL 317


>gi|109946740|ref|YP_663968.1| hypothetical protein Hac_0115 [Helicobacter acinonychis str.
           Sheeba]
 gi|109713961|emb|CAJ98969.1| conserved hypothetical protein [Helicobacter acinonychis str.
           Sheeba]
          Length = 329

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 109/320 (34%), Positives = 173/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAVQVLQDEASAL--LESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  SASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + ESCP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIKKESCPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+   +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPNTSFKDALIEMSEKRLGSAILVNANNE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K ++  S V D     PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGVSLESEVRDFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   K +G++H   LL  G+
Sbjct: 308 DSHNKVLGVLHLHQLLELGL 327


>gi|242060564|ref|XP_002451571.1| hypothetical protein SORBIDRAFT_04g004050 [Sorghum bicolor]
 gi|241931402|gb|EES04547.1| hypothetical protein SORBIDRAFT_04g004050 [Sorghum bicolor]
          Length = 345

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 106/320 (33%), Positives = 167/320 (52%), Gaps = 13/320 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
             A++R L     SL    +  F  A   +    G V  TG+GKSG +  K+A TLAS G
Sbjct: 29  FSAQRRHLDHFFDSLDMSQAAAFAQA---LIDAPGAVFFTGVGKSGIVACKIAQTLASLG 85

Query: 91  T-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
              + F+   +A HGD+G +   D+++++S SG+SDEL A+   AR     LI++TS   
Sbjct: 86  FARAGFLAPVDALHGDIGALFPGDVLVLISKSGASDELLALAPCARAKGAYLISLTSAAS 145

Query: 150 S---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + +  
Sbjct: 146 GAECPLAAACDLNVHLPLQGEVCPFGLAPVTSTAIQMVFGDTVIAAIMEARRLSRDQYAS 205

Query: 207 LHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            HP GK+G TL     DVM   + +PL K G  +++ +T L+ K  GC+ VVDE   L G
Sbjct: 206 NHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMIMEQLTELTSKGCGCLLVVDEEHHLIG 265

Query: 266 IITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVV 320
             T+GD+ R        + +L+V ++  +NP+ I  + +   AM+ +      +  L V+
Sbjct: 266 TFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTITAEAMAVEAMEKMESPPSPVQFLPVI 325

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           +D     GI+    L+  G+
Sbjct: 326 NDNNIVCGIITLHGLVSAGL 345


>gi|148238574|ref|YP_001223961.1| polysialic acid capsule expression protein [Synechococcus sp. WH
           7803]
 gi|147847113|emb|CAK22664.1| Polysialic acid capsule expression protein [Synechococcus sp. WH
           7803]
          Length = 340

 Score =  257 bits (658), Expect = 1e-66,   Method: Composition-based stats.
 Identities = 99/313 (31%), Positives = 164/313 (52%), Gaps = 11/313 (3%)

Query: 21  NSTVQCAL-RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  +  AL R +  E   +++  + L  +        +E+    K ++VITG+GKSG + 
Sbjct: 9   DPAIVSALTRCLQEEAAAIAAAAARLHADQVEGALTLLERCADRKAKLVITGVGKSGIVA 68

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K+A+T +S G  + +++  +A HGDLG++  DD+ ++LS SG + EL  +L + +R   
Sbjct: 69  RKIAATFSSIGLMALYLNPLDALHGDLGVVAADDVCLLLSNSGETAELLDLLPHLKRRGT 128

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             IA+     S +A  +D+ L    + E CP  LAPT S  + +AIGDALA   +E R  
Sbjct: 129 ARIALVGRADSSLARGSDVALDASVDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGI 188

Query: 200 SENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S+ DF + HP G LG    +  +D+M     +P +    PL + I+ L++   G   V D
Sbjct: 189 SQADFALNHPAGALGKQLTMTVADLMVPVAQLPSITPATPLAEVISGLTQGAIGSGWVED 248

Query: 259 EG--QKLKGIITEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                +L+G+IT+GD+ R       +   TL+  ++M  +P  +  D L   A+Q +  +
Sbjct: 249 SSQPGRLQGLITDGDLRRALRDHGPERWPTLTAGELMTADPITVSADLLAVEAIQRMEHN 308

Query: 313 N---ISVLMVVDD 322
               ISVL VVD+
Sbjct: 309 RRKPISVLPVVDE 321


>gi|290890875|ref|ZP_06553940.1| hypothetical protein AWRIB429_1330 [Oenococcus oeni AWRIB429]
 gi|290479454|gb|EFD88113.1| hypothetical protein AWRIB429_1330 [Oenococcus oeni AWRIB429]
          Length = 317

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 103/319 (32%), Positives = 158/319 (49%), Gaps = 13/319 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A      E   L+S+   L      +F   V+ I    GR+V  GIGKS  I  K+++
Sbjct: 5   EIARDVFAKESAELASVAKRL----DDKFDKLVDLINDTNGRIVFIGIGKSQIIAEKISA 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR---RFSIPL 141
           +L+S    SF V A  A HGDLG I+ DDL+I +S SG + E+   L+  +      +  
Sbjct: 61  SLSSVSIHSFTVDAGTAYHGDLGRISDDDLLIFVSNSGETQEVVQTLFALQTIYPKGLKT 120

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           +++T    S +A +  +   L    E+   GLAPT+S    L  GDAL  A+ +S +F+ 
Sbjct: 121 VSLTGNLDSTLATNTGLAFDLGVSKEADTTGLAPTSSTTATLVFGDALLAAMEKSISFNR 180

Query: 202 NDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           N F + HPGG +G  L      VMH  + +P      P+ + I  +S+   G   V D+ 
Sbjct: 181 NQFALYHPGGTIGKLLLQRVKHVMH--EKVPYANEDTPINEVIYQISDYGIGMTLVKDKD 238

Query: 261 -QKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K  GI+T+GDI + F   + +      D M K    I ++     A QL+  H IS L
Sbjct: 239 SGKAIGIVTDGDIRKKFLSVQSVKKSVASDYMTKGFVSINQEKRNRTAWQLMANHGISNL 298

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +V+D+ +K +G+V   D+L
Sbjct: 299 VVIDNDEKVVGVVTIHDVL 317


>gi|326528327|dbj|BAJ93345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 434

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 106/321 (33%), Positives = 166/321 (51%), Gaps = 18/321 (5%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L++L  + +  L   F            + +    G V  TG+GKSG +  KLA TLAS 
Sbjct: 114 LAALFRAQRRHLDHFFDRLDMPQAAAFAQALLDAPGAVFFTGVGKSGIVARKLAQTLASL 173

Query: 90  GT-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           G   + F+   +A HGD+G +   D++++LS SG+SDEL A++  AR     LI++TS  
Sbjct: 174 GFARAGFLSPVDALHGDIGSLFPGDVLVLLSKSGASDELLALVPCARAKGARLISLTSAA 233

Query: 149 KS---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
                 +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  + + + 
Sbjct: 234 SGADCPLAAACDLNVHLPLQGEVCPFGLAPVTSTAIQMVFGDTVVAAIMEARRLTRDQYA 293

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP GK+G TL     DVM   + +PL K G  ++D +T L+ K  GC+ VVD+   L 
Sbjct: 294 ANHPAGKIGKTLIFKVKDVMKKQNDLPLCKEGDMIMDQLTELTSKGCGCLLVVDDEYHLI 353

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMV 319
           G  T+GD+ R        + +L+V ++  +NP+ I    +   AM+ +      +  L V
Sbjct: 354 GTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTITAGAMAVEAMEKMESPPSPVQFLPV 413

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           VDD     GI+    L+  G+
Sbjct: 414 VDDKNVVSGIITLHGLVSAGL 434


>gi|330813573|ref|YP_004357812.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486668|gb|AEA81073.1| arabinose 5-phosphate isomerase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 323

 Score =  257 bits (657), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 110/323 (34%), Positives = 174/323 (53%), Gaps = 9/323 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +  A + I  E  GL  L  S+       F  AV  I   KGR+V  G+GKS  
Sbjct: 1   MNKKNIINIANKVISTEIEGLKKLSKSIN----ISFAQAVNTINNSKGRIVCCGVGKSAK 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  K++STL+S G  SF +   +A HG LG I   D++I+ S+SG+S EL +IL YA++ 
Sbjct: 57  ILEKISSTLSSIGIASFTLDPTDAGHGSLGAICGGDVLIIASFSGNSSELNSILDYAKKN 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPK--EPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            I +I I+S  KS +   +++ + +PK  E  +    + PT+S+I  LA+GD +AIAL  
Sbjct: 117 KIKIIGISSNLKSNLIKLSNVKILIPKVAEAGNKHLNMIPTSSSINLLALGDCMAIALAT 176

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
              F + +F  LHP G +G      S +M +  SIP V     L   +  +S  R G V 
Sbjct: 177 KNKFDKKEFGKLHPSGSIGKNLSDISQIMIARKSIPFVHEDSSLQKTVIKISSGRLGGVV 236

Query: 256 VVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V ++ +++ G I++GDI R     K++     +D+M K P  I    ++T A+ ++ +  
Sbjct: 237 VTNKRKQVCGFISDGDINRAIKKFKNIFLKKSKDIMTKKPTYISNTCMVTEALAIMNRKK 296

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I++L+V    +K  G+VH  D+L
Sbjct: 297 ITILLVA-KNKKLYGLVHMHDIL 318


>gi|317014802|gb|ADU82238.1| arabinose-5-phosphate isomerase [Helicobacter pylori Gambia94/24]
          Length = 329

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 112/320 (35%), Positives = 176/320 (55%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLKDEASAL--LESVGQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V++  +
Sbjct: 188 DFASFHPGGLLGRKLFVKVKDLLQTTNLPLIAPNTSFKDALIEMSEKRLGSAILVNDNNE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L GI+++GD+ R   K L+  S V+      PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGILSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DDC K +G++H   LL  G+
Sbjct: 308 DDCNKVLGVLHLHQLLELGL 327


>gi|297816764|ref|XP_002876265.1| sugar isomerase domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322103|gb|EFH52524.1| sugar isomerase domain-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 350

 Score =  257 bits (656), Expect = 2e-66,   Method: Composition-based stats.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 9/334 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           + G S  +  +    L    +++  L+     L    +  F      + +  G V  TG+
Sbjct: 20  KNGGSSHQEISRDNLLNLFTSQQDLLNHFFKHLDLSQTLDFSRI---LLSTTGTVFFTGV 76

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKS  + +K++ TL S    S F+   +A HGD+G ++  D+++  S SG+++EL  ++ 
Sbjct: 77  GKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGATEELLRLVP 136

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            AR     L+++TS + + +A   D+ + LP + E CP  LAP TS  +Q+  GD +A+A
Sbjct: 137 CARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMVFGDTIAVA 196

Query: 193 LLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L+ +RN S+ ++   HP G++G        DVM   + +P+ K G  ++D +  L+ K  
Sbjct: 197 LMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEGDLIMDQLVELTSKGC 256

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           GC+ VVDE  +L G  T+GD+ R      + +  LSV ++  + P+ I  +T+   AM+ 
Sbjct: 257 GCLLVVDEHYRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPETMAVEAMKK 316

Query: 309 LRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +      +  L VV++    IGIV    L+  G+
Sbjct: 317 MESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350


>gi|317181109|dbj|BAJ58895.1| polysialic acid capsule expression protein [Helicobacter pylori
           F32]
          Length = 329

 Score =  255 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 111/327 (33%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVQQFQKPNDLEAIVKLILKSQEKGGKIVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V++  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNDNNELVGILSDGDVRRALLKGLNLESEVKRFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|317182631|dbj|BAJ60415.1| polysialic acid capsule expression protein [Helicobacter pylori
           F57]
          Length = 327

 Score =  255 bits (653), Expect = 5e-66,   Method: Composition-based stats.
 Identities = 111/327 (33%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 1   MPLDYNAIAAQVLRDEASAL--LESVQQFQKPNDLEAVVKLILKSQEKGGKLVIVGVGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 59  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 119 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 178

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 179 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 238

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V++  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 239 LVNDNNELVGILSDGDVRRALLKGLNLESEVKRFATLKPKSFKNLDALLLEALEFLERHK 298

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 299 IQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|15232565|ref|NP_191029.1| sugar isomerase (SIS) domain-containing protein / CBS
           domain-containing protein [Arabidopsis thaliana]
 gi|7258373|emb|CAB77589.1| sugar-phosphate isomerase-like protein [Arabidopsis thaliana]
 gi|110742297|dbj|BAE99073.1| sugar-phosphate isomerase - like protein [Arabidopsis thaliana]
 gi|332645746|gb|AEE79267.1| sugar isomerase domain-containing protein [Arabidopsis thaliana]
          Length = 350

 Score =  255 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/334 (29%), Positives = 172/334 (51%), Gaps = 9/334 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           + G S  +  +    L    +++  L+     L    +  F      + +  G V  TG+
Sbjct: 20  KNGGSSHQEISHDNLLNLFKSQQDLLNHFFKHLDLSQTLDFSRI---LLSTTGTVFFTGV 76

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKS  + +K++ TL S    S F+   +A HGD+G ++  D+++  S SG+++EL  ++ 
Sbjct: 77  GKSAFVANKVSQTLVSLSFRSSFLSPLDALHGDIGALSPRDVLVFFSKSGATEELLRLVP 136

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            AR     L+++TS + + +A   D+ + LP + E CP  LAP TS  +Q+  GD +A+A
Sbjct: 137 CARAKGAFLVSLTSVSGNPLAGVCDMNVHLPLQRELCPFNLAPVTSTAIQMVFGDTIAVA 196

Query: 193 LLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           L+ +RN S+ ++   HP G++G        DVM   + +P+ K G  ++D +  L+ K  
Sbjct: 197 LMAARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQEELPVCKEGDLIMDQLVELTSKGC 256

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           GC+ VVDE  +L G  T+GD+ R      + +  LSV ++  + P+ I  +T+   AM+ 
Sbjct: 257 GCLLVVDEHSRLIGTFTDGDLRRTLKASGEAIFKLSVGEMCNRKPRTIGPETMAVEAMKK 316

Query: 309 LRQ--HNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +      +  L VV++    IGIV    L+  G+
Sbjct: 317 MESPPSPVQFLPVVNEDNTLIGIVTLHGLVSAGL 350


>gi|262276741|ref|ZP_06054534.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
 gi|262223844|gb|EEY74303.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
          Length = 324

 Score =  255 bits (653), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 106/323 (32%), Positives = 172/323 (53%), Gaps = 9/323 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   +    + I  E   L  L  +L       F  AV  I   KG +V +G+GKS  I 
Sbjct: 4   EKQILSFGKKLIKEEINALIKLHKNLN----INFSKAVNLINNTKGNIVFSGVGKSKLIL 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K   T +S G PS+ + A++A+HG LG +  +D +I+ S SG+++EL AI  +A+++ I
Sbjct: 60  EKTCGTFSSLGVPSYVLDASQATHGSLGNLKNNDTLIIASNSGNTNELIAIFKFAKKYRI 119

Query: 140 PLIAITSENKSVVACHADIVLTLP--KEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +I I+S +KS +  ++DI +  P  KE       L PT+S     AIGDALAI++ + R
Sbjct: 120 KIIGISSNSKSQLFKNSDINIVYPKVKEIGDSNFKLVPTSSTTTLSAIGDALAISVAKLR 179

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+  DF   HPGG++G       D++ +  +IP V         +++++ KR GC  V 
Sbjct: 180 GFTIRDFSQAHPGGQIGKALTSIKDLLITHKNIPFVNNEASFSKILSVIASKRLGCALVK 239

Query: 258 DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           D+ +K   I+T+GD  R     K+L+ +  +D+M KNP    E TL+  A+ ++ +  I+
Sbjct: 240 DKKRKKISIVTDGDCSRAAAKYKNLSLIKAKDIMTKNPSYTDEKTLVPDALTIMNKKRIT 299

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
           VL++     K  G+V    +L F
Sbjct: 300 VLLI-KSKGKFKGLVSIHSILEF 321


>gi|322434744|ref|YP_004216956.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX9]
 gi|321162471|gb|ADW68176.1| KpsF/GutQ family protein [Acidobacterium sp. MP5ACTX9]
          Length = 324

 Score =  255 bits (652), Expect = 6e-66,   Method: Composition-based stats.
 Identities = 98/280 (35%), Positives = 155/280 (55%), Gaps = 6/280 (2%)

Query: 44  SLQGELSFQFHCAVEKIKAIKG---RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
            L GE+      A+  ++       RV+ TGIGKSG I  K+A+TL STGT + ++H AE
Sbjct: 23  RLDGEMGVAVERALGLLEGCAAGGRRVICTGIGKSGIIARKIAATLCSTGTAAAYLHPAE 82

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           A HGDLGM  + D+++ LS+SG ++E+  +L    R  + +++    + S +A  + +VL
Sbjct: 83  ALHGDLGMAAKGDVVVALSYSGETEEVLRLLPAFERLGVGVVSFCGCSSSTLARGSAVVL 142

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +    E+C   LAPT S  + LA+GDALA+ L   R F+  DF  LHPGG+LG      
Sbjct: 143 DVSVSEEACSLNLAPTASTTVMLALGDALALELSRRRGFAAVDFAGLHPGGRLGRRLARV 202

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-- 278
            ++MHSG+++P V +   + + I  +S KR G   V+  G  L GI+++GD+ R   K  
Sbjct: 203 RELMHSGEALPTVSVETSMPEMIHEMSRKRLGMTVVLGAGGGLAGIVSDGDLRRLLEKAG 262

Query: 279 -DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +    +  +VM  +P  I    +   A+ L+ +  I+ L
Sbjct: 263 AESFGKTAGEVMNGSPVTIPSGMMAADALVLMEERKITAL 302


>gi|317179604|dbj|BAJ57392.1| polysialic acid capsule expression protein [Helicobacter pylori
           F30]
          Length = 329

 Score =  255 bits (652), Expect = 7e-66,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 173/327 (52%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V  I   +   G++VI G+GKS
Sbjct: 3   MPTDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAIVRLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPNTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|322379599|ref|ZP_08053936.1| KpsF-like protein [Helicobacter suis HS1]
 gi|321147993|gb|EFX42556.1| KpsF-like protein [Helicobacter suis HS1]
          Length = 319

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 112/328 (34%), Positives = 172/328 (52%), Gaps = 18/328 (5%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR---VVITGIGKS 75
           MK+   + A + +  E   L  L  SL        H  +E I         VVI G+GKS
Sbjct: 1   MKSDFGKLAKQILNTEAEAL--LRVSLD-------HTTLEPIITCLAHAPLVVIMGVGKS 51

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            HIG K+A+TL STGT + F+H  E+ HGD+G++   D+I+ +S+ G S EL   L   +
Sbjct: 52  AHIGRKIAATLTSTGTKAIFLHPTESLHGDMGIVGPRDVILAISYGGESMELLEALGSLK 111

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                LIA+T +N + ++  A  ++ L    E+   G  P+TS  + LA+GD LA  L+E
Sbjct: 112 PK--TLIAMTKDNNNSLSKLATYLIPLKLTQEAISFG-VPSTSTTLSLALGDVLAACLME 168

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            +NFS  DF  LHPGG LG         +    ++PLV     L  A+   ++K  G   
Sbjct: 169 VKNFSREDFAKLHPGGLLGKKLRLRVRDILLTKNLPLVDQEACLHAALVEANDKCLGNAL 228

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           +VD+ Q+L GI+++GDI R   +         ++    NPK I   D L+  A++L+  +
Sbjct: 229 LVDDQQRLIGILSDGDIRRALLQSEFDSTAPAKNFATLNPKTISNLDMLVVEALELIETY 288

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            IS+L+V D+ +K +G++H   LL  G+
Sbjct: 289 KISLLVVCDNQKKVLGVLHLHTLLALGL 316


>gi|217032119|ref|ZP_03437619.1| hypothetical protein HPB128_16g79 [Helicobacter pylori B128]
 gi|298735611|ref|YP_003728136.1| arabinose-5-phosphate isomerase [Helicobacter pylori B8]
 gi|216946267|gb|EEC24875.1| hypothetical protein HPB128_16g79 [Helicobacter pylori B128]
 gi|298354800|emb|CBI65672.1| arabinose-5-phosphate isomerase [Helicobacter pylori B8]
          Length = 329

 Score =  255 bits (651), Expect = 9e-66,   Method: Composition-based stats.
 Identities = 113/320 (35%), Positives = 176/320 (55%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLRDEASAL--LESVGQFQKPNDLEAIVKLILKSQENGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLILPSTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L GI+++GD+ R   K L+  S V+      PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGILSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DDC K +G++H   LL  G+
Sbjct: 308 DDCNKVLGVLHLHQLLELGL 327


>gi|317011561|gb|ADU85308.1| hypothetical protein HPSA_06730 [Helicobacter pylori SouthAfrica7]
          Length = 329

 Score =  255 bits (651), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 171/320 (53%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  IASQVLQDEASAL--LESVQQFQKPNDLEAIVKLILESQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  SASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+   +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIPPDTSFKDALIEMSEKRLGSAILVNANNE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGVSLESEVSYFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D   K +G++H   LL  G+
Sbjct: 308 DSQNKVLGVLHLHQLLELGL 327


>gi|297380587|gb|ADI35474.1| sugar isomerase, KpsF/GutQ family [Helicobacter pylori v225d]
          Length = 327

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 176/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 1   MPLDYNAIAVQVLRDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 59  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 119 RLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMR 178

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 179 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 238

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 239 LVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDALLLEALEFLERHK 298

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDDC K +G++H   LL  G+
Sbjct: 299 IQLLVCVDDCNKVLGVLHLHQLLELGL 325


>gi|332674193|gb|AEE71010.1| possible arabinose-5-phosphate isomerase [Helicobacter pylori 83]
          Length = 327

 Score =  254 bits (650), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 175/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 1   MPLDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAVVKLILKSQEKGGKLVIVGVGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 59  ALVAQKIAASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 119 RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 178

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 179 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 238

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 239 LVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLERHK 298

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 299 IQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|217034558|ref|ZP_03439967.1| hypothetical protein HP9810_874g15 [Helicobacter pylori 98-10]
 gi|216942978|gb|EEC22461.1| hypothetical protein HP9810_874g15 [Helicobacter pylori 98-10]
          Length = 329

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVQQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|261840102|gb|ACX99867.1| hypothetical protein HPKB_1326 [Helicobacter pylori 52]
          Length = 329

 Score =  254 bits (649), Expect = 1e-65,   Method: Composition-based stats.
 Identities = 111/327 (33%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V++  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNDNNELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|317010203|gb|ADU80783.1| polysialic acid capsule expression protein [Helicobacter pylori
           India7]
          Length = 329

 Score =  254 bits (649), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 172/320 (53%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A + +  E   L  LES  Q +        V  I   +   G++VI G+GKS  +  K+
Sbjct: 10  IAAQVLKDEASAL--LESVQQFQKPNDLEAIVNLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +R S  +I
Sbjct: 68  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L    E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKITKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPNTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DDC K +G++H   LL  G+
Sbjct: 308 DDCNKVLGVLHLHQLLELGL 327


>gi|308062689|gb|ADO04577.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Cuz20]
 gi|308064181|gb|ADO06068.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Sat464]
          Length = 329

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 175/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDDC K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|15612389|ref|NP_224042.1| hypothetical protein jhp1324 [Helicobacter pylori J99]
 gi|7388502|sp|Q9ZJI5|YE29_HELPJ RecName: Full=Uncharacterized protein jhp_1324
 gi|4155933|gb|AAD06900.1| putative [Helicobacter pylori J99]
          Length = 329

 Score =  254 bits (648), Expect = 2e-65,   Method: Composition-based stats.
 Identities = 109/320 (34%), Positives = 174/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLRDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  VASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V++  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAILVNDNNE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K L+  S V+      PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 308 DDRNKVLGVLHLHQLLELGL 327


>gi|308185187|ref|YP_003929320.1| hypothetical protein HPSJM_07235 [Helicobacter pylori SJM180]
 gi|308061107|gb|ADO03003.1| hypothetical protein HPSJM_07235 [Helicobacter pylori SJM180]
          Length = 329

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 106/320 (33%), Positives = 169/320 (52%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLRDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V++  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAILVNDNNE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLMVV 320
           L G++++GD+ R   K L+  S V       PK       L +      + H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGLSLESEVRHFATLKPKSFKNLDALLLEALEFLECHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 308 DDRNKVLGVLHLHQLLELGL 327


>gi|317178132|dbj|BAJ55921.1| polysialic acid capsule expression protein [Helicobacter pylori
           F16]
          Length = 329

 Score =  253 bits (646), Expect = 3e-65,   Method: Composition-based stats.
 Identities = 113/327 (34%), Positives = 173/327 (52%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I      +G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKRGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GDI R   K LN  S V+      PK     D LL  A++ L  H 
Sbjct: 241 LVNEANELVGILSDGDIRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLEHHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDHNKVLGVLHLHQLLELGL 327


>gi|188528192|ref|YP_001910879.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Shi470]
 gi|188144432|gb|ACD48849.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Shi470]
          Length = 329

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 241 LVNEANELVGILSDGDVRRALLKGLNLKSEVKRFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDRNKVLGVLHLHQLLELGL 327


>gi|315585813|gb|ADU40194.1| arabinose-5-phosphate isomerase [Helicobacter pylori 35A]
          Length = 327

 Score =  252 bits (645), Expect = 4e-65,   Method: Composition-based stats.
 Identities = 112/327 (34%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 1   MPIDYNAIAAQVLRDEASAL--LESVKQFQKPNDLEAVVKLILKSQEKGGKLVIVGVGKS 58

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 59  ALVAQKIVASMLSTGNKSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 118

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 119 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 178

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 179 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 238

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L GI+++GD+ R   K LN  S V+      PK     D LL  A++ L +H 
Sbjct: 239 LVNEANELVGILSDGDVRRALLKGLNLESEVKYFATLKPKSFKNLDALLLEALEFLERHK 298

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 299 IQLLVCVDDHNKVLGVLHLHQLLELGL 325


>gi|108563779|ref|YP_628095.1| polysialic acid capsule expression protein [Helicobacter pylori
           HPAG1]
 gi|107837552|gb|ABF85421.1| polysialic acid capsule expression protein [Helicobacter pylori
           HPAG1]
          Length = 329

 Score =  252 bits (644), Expect = 5e-65,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 174/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLKDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  TASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPNTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DDC K +G++H   LL  G+
Sbjct: 308 DDCNKVLGVLHLHQLLELGL 327


>gi|307638088|gb|ADN80538.1| Polysialic acid capsule expression protein [Helicobacter pylori
           908]
 gi|325996689|gb|ADZ52094.1| Polysialic acid capsule expression protein [Helicobacter pylori
           2018]
 gi|325998281|gb|ADZ50489.1| hypothetical protein hp2017_1370 [Helicobacter pylori 2017]
          Length = 329

 Score =  252 bits (644), Expect = 6e-65,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 175/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  TAIQVLRDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V++  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPNTSFKDALIEMSEKRLGSAILVNKANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K L+  S V+      PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 308 DDRNKVLGVLHLHQLLELGL 327


>gi|254779940|ref|YP_003058047.1| putative phosphosugar isomerase [Helicobacter pylori B38]
 gi|254001853|emb|CAX30103.1| Putative phosphosugar isomerase [Helicobacter pylori B38]
          Length = 327

 Score =  252 bits (643), Expect = 8e-65,   Method: Composition-based stats.
 Identities = 111/320 (34%), Positives = 173/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 8   IAAQVLRDEASAL--LESVKQFQEPNDLEAVVKLILKSQEKGGKLVIVGVGKSALVAQKI 65

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 66  AASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 125

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 126 TFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 185

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 186 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLILPSTSFKDALIEMSEKRLGSAILVNEANE 245

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K L+  S V       PK     D LL  A++ L +H I +L+ V
Sbjct: 246 LVGVLSDGDVRRALLKGLSLESEVRHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 305

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 306 DDHNKVLGVLHLHQLLELGL 325


>gi|322380210|ref|ZP_08054441.1| polysialic acid capsule expression protein KpsF [Helicobacter suis
           HS5]
 gi|321147376|gb|EFX42045.1| polysialic acid capsule expression protein KpsF [Helicobacter suis
           HS5]
          Length = 319

 Score =  251 bits (642), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 113/328 (34%), Positives = 172/328 (52%), Gaps = 18/328 (5%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR---VVITGIGKS 75
           MK+   + A + + AE   L  L  SL        H  +E I         VVI G+GKS
Sbjct: 1   MKSDFGKLAKQILNAEAEAL--LRVSLD-------HTTLEPIITCLAHAPLVVIMGVGKS 51

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            HIG K+A+TL STGT + F+H  E+ HGD+G++   D+I+ +S+ G S EL   L   +
Sbjct: 52  AHIGRKIAATLTSTGTKAIFLHPTESLHGDMGIVGPRDVILAISYGGESMELLEALGSLK 111

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                LIA+T +N + ++  A  ++ L    E+   G  P+TS  + LA+GD LA  L+E
Sbjct: 112 PK--TLIAMTKDNNNSLSKLATYLIPLKLTQEAISFG-VPSTSTTLSLALGDVLAACLME 168

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            +NFS  DF  LHPGG LG         +    ++PLV     L  A+   ++K  G   
Sbjct: 169 VKNFSREDFAKLHPGGLLGKKLRLRVRDILLTKNLPLVDQEACLHAALVEANDKCLGNAL 228

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           +VD+ Q+L GI+++GDI R   +         ++    NPK I   D L+  A++L+  +
Sbjct: 229 LVDDQQRLIGILSDGDIRRALLQSEFDSTAPAKNFATLNPKTISNLDMLVVEALELIETY 288

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            IS+L+V  D +K +G++H   LL  G+
Sbjct: 289 KISLLVVCGDQKKVLGVLHLHTLLALGL 316


>gi|308183522|ref|YP_003927649.1| hypothetical protein HPPC_06955 [Helicobacter pylori PeCan4]
 gi|308065707|gb|ADO07599.1| hypothetical protein HPPC_06955 [Helicobacter pylori PeCan4]
          Length = 329

 Score =  251 bits (641), Expect = 1e-64,   Method: Composition-based stats.
 Identities = 110/320 (34%), Positives = 174/320 (54%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A++ +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  AAIQVLKDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  VASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPTSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K L+  S V+      PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGLSLESEVKHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 308 DDHNKVLGVLHLHQLLELGL 327


>gi|261838702|gb|ACX98468.1| polysialic acid capsule expression protein [Helicobacter pylori 51]
          Length = 329

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 110/327 (33%), Positives = 173/327 (52%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V  I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLKDEASAL--LESVKQFQKPNDLEAIVRLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIVASMLSTGNKSVFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H 
Sbjct: 241 LVNEANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDDC K +G++H   LL  G+
Sbjct: 301 IQLLVCVDDCNKVLGVLHLHQLLELGL 327


>gi|317013193|gb|ADU83801.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori Lithuania75]
          Length = 329

 Score =  250 bits (640), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 107/320 (33%), Positives = 169/320 (52%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  IAAQVLKDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +R S  +I
Sbjct: 68  VASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQ-HNISVLMVV 320
           L G++++GD+ R   K L+  S V+      PK       L +      + H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGLDLKSEVKRFATLKPKSFKNLDALLLEALEFLECHKIQILVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DDC K +G++H   LL  G+
Sbjct: 308 DDCNKVLGVLHLHQLLELGL 327


>gi|15646038|ref|NP_208220.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori 26695]
 gi|7388494|sp|O25971|Y1429_HELPY RecName: Full=Uncharacterized protein HP_1429
 gi|2314601|gb|AAD08468.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori 26695]
          Length = 329

 Score =  250 bits (639), Expect = 2e-64,   Method: Composition-based stats.
 Identities = 108/320 (33%), Positives = 172/320 (53%), Gaps = 7/320 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKL 82
            A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS  +  K+
Sbjct: 10  IASQVLKDEASAL--LESVGQFQKPNDLEAIVKLILKSQENGGKLVIVGVGKSALVAQKI 67

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
            +++ STG  S F+H  EA HGDLGM+ ++D+++++S+ G S EL  ++ + +R S  +I
Sbjct: 68  VASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVVLMISYGGESLELLNLVSHLKRLSHKII 127

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
             T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ ++NFS+ 
Sbjct: 128 TFTKSPNSSLSKLGDYYLSLKIQKEACPINTAPTTSTTLTLALGDVLMACLMRAKNFSQE 187

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF   HPGG LG         +    ++PL+       DA+  +SEKR G   +V+E  +
Sbjct: 188 DFASFHPGGLLGKKLFVKVKDLLQTTNLPLIAPSTSFKDALIEMSEKRLGSAILVNEANE 247

Query: 263 LKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVV 320
           L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H I +L+ V
Sbjct: 248 LVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDALLLEALEFLERHKIQLLVCV 307

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           DD  K +G++H   LL  G+
Sbjct: 308 DDHNKVLGVLHLHQLLELGL 327


>gi|153217455|ref|ZP_01951185.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124113544|gb|EAY32364.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 236

 Score =  250 bits (638), Expect = 3e-64,   Method: Composition-based stats.
 Identities = 92/237 (38%), Positives = 142/237 (59%), Gaps = 4/237 (1%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI R D+++ +S SG S E+ A+L   +R SI +I++T    S +A  ADI L +    E
Sbjct: 1   MIERGDIVLAISNSGESSEILALLPVLKRLSIRVISMTGNPNSNMAKLADIHLQITVPRE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHS 226
           +CP  LAPT+S    L +GDALA+AL+++R F+  DF + HPGG LG    +  +D+MHS
Sbjct: 61  ACPLELAPTSSTTATLVMGDALAVALMQARGFTAEDFALSHPGGALGRKLLLKLNDIMHS 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
           G ++P V     + DA+  +S+K  G  AVVDE   L GI T+GD+ R   K  D++T +
Sbjct: 121 GKALPKVAPQALIRDALLEISQKGLGMTAVVDEDDTLLGIFTDGDLRRILDKRIDIHTTA 180

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + DVM + P V   + L    + L++   I+ LM+V +  K +G ++  DLL+ G++
Sbjct: 181 IADVMTRQPTVAQPNLLAVEGLNLMQAKRINGLMLV-ENNKLVGALNMHDLLKAGVM 236


>gi|207091905|ref|ZP_03239692.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori HPKX_438_AG0C1]
          Length = 329

 Score =  249 bits (637), Expect = 4e-64,   Method: Composition-based stats.
 Identities = 111/327 (33%), Positives = 174/327 (53%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLRDEASAL--LESVKQFQEPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPTSSLSKLGDYYLSLKIKKEACPINSAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLILPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+E  +L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H 
Sbjct: 241 LVNETNELVGVLSDGDVRRALLKGVSLESEVRHFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQILVCVDDHNKVLGVLHLHQLLELGL 327


>gi|124024239|ref|YP_001018546.1| polysialic acid capsule expression protein KpsF [Prochlorococcus
           marinus str. MIT 9303]
 gi|123964525|gb|ABM79281.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9303]
          Length = 347

 Score =  249 bits (636), Expect = 5e-64,   Method: Composition-based stats.
 Identities = 96/284 (33%), Positives = 151/284 (53%), Gaps = 13/284 (4%)

Query: 50  SFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           S Q   A+  ++     + ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDL
Sbjct: 40  SSQVEKALVLLERCGDQRAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAMHGDL 99

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
           G++ ++D+ ++LS SG + EL  +L + +R     IA+  +  S +A  +D+VL    + 
Sbjct: 100 GVVAQEDVCLLLSNSGETAELLEVLPHLKRRGTARIALVGKPDSSLARGSDVVLEASVDR 159

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMH 225
           E CP  LAPT S  + +AIGDALA   +E RN S  DF   HP G LG      ASD+M 
Sbjct: 160 EVCPLNLAPTASTAVAMAIGDALAAIWMERRNISPADFAFNHPAGSLGKQLTLTASDLMV 219

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF----HKD 279
               +  ++    L D I  L++   G   V D      L G+IT+GD+ R       ++
Sbjct: 220 PVAKVQPLQPNTSLQDVICKLTQDGIGSGWVEDPSTAGLLLGLITDGDLRRALRDHSAEN 279

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR---QHNISVLMVV 320
             +LS  D+M  +P  +  D L   A++ +    +  ISVL VV
Sbjct: 280 WASLSAADLMTADPITVDADLLAVEAIKQMECNRRKPISVLPVV 323


>gi|33864177|ref|NP_895737.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9313]
 gi|33635761|emb|CAE22086.1| putative polysialic acid capsule expression protein KpsF
           [Prochlorococcus marinus str. MIT 9313]
          Length = 347

 Score =  249 bits (635), Expect = 6e-64,   Method: Composition-based stats.
 Identities = 92/275 (33%), Positives = 149/275 (54%), Gaps = 10/275 (3%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
            +E+    + ++VITG+GKSG +  K+A+T +S G  + +++  +A HGDLG++ ++D+ 
Sbjct: 49  LLERCSDQRAKLVITGVGKSGIVARKIAATFSSIGLMALYLNPLDAMHGDLGVVAQEDVC 108

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           ++LS SG + EL  +L + +R     IA+  +  S +A  +D+VL    + E CP  LAP
Sbjct: 109 LLLSNSGETAELLEVLPHLKRRGTARIALVGKPDSSLARGSDVVLEASVDREVCPLNLAP 168

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVK 234
           T S  + +AIGDALA   +E RN S  DF   HP G LG      ASD+M   + +  ++
Sbjct: 169 TASTAVAMAIGDALAAIWMERRNISPADFAFNHPAGSLGKQLTLTASDLMVPVEKVQPLQ 228

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF----HKDLNTLSVEDV 288
               L + I  L++   G   V D      L G+IT+GD+ R       ++  +LS  ++
Sbjct: 229 PNTSLQEVICKLTQDGIGSGWVEDPSTAGLLLGLITDGDLRRALRDHSAENWASLSAAEL 288

Query: 289 MIKNPKVILEDTLLTVAMQLLR---QHNISVLMVV 320
           M  +P  +  D L   A++ +    +  ISVL VV
Sbjct: 289 MTADPITVDADLLAVEAIKQMECNRRKPISVLPVV 323


>gi|226493548|ref|NP_001144421.1| hypothetical protein LOC100277365 [Zea mays]
 gi|195641864|gb|ACG40400.1| hypothetical protein [Zea mays]
          Length = 347

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 18/321 (5%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L+ L S+ +  L   F            + +    G V  TG+GKSG +  K A TLAS 
Sbjct: 27  LAPLFSAQRRHLDHFFDRLDMAQAAAFAQALLDAPGAVFFTGVGKSGIVARKTAQTLASL 86

Query: 90  GT-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           G   + F+   +A HGD+G +   D++++LS SG+SDEL A+   AR     L+++TS  
Sbjct: 87  GLARAGFLAPVDALHGDIGALFPGDVLVLLSKSGASDELLALAPCARAKGAYLVSLTSAA 146

Query: 149 KS---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
                 +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + + 
Sbjct: 147 SGDDCPLAAACDLNVHLPLQGEVCPFGLAPVTSTAIQMVFGDTVIAAIMEARRLSRDQYA 206

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP GK+G TL     DVM   + +PL K G  ++D +T L+ K  GC+ VVDE   L 
Sbjct: 207 SNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDEEHHLI 266

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMV 319
           G  T+GD+ R        + +L+V ++  +NP+ I  + +   AM+ +      +  L V
Sbjct: 267 GTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTITAEAMAVEAMEKMEAPPSPVQFLPV 326

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V++     GI+    L+  G+
Sbjct: 327 VNENNVVCGIITLHGLVSAGL 347


>gi|33864723|ref|NP_896282.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 8102]
 gi|33632246|emb|CAE06702.1| putative polysialic acid capsule expression protein KpsF
           [Synechococcus sp. WH 8102]
          Length = 339

 Score =  248 bits (633), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 93/292 (31%), Positives = 151/292 (51%), Gaps = 10/292 (3%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L  +        +E+    K ++VITG+GKSG +  K+A+T +S G  + F++  +A H
Sbjct: 32  RLSSDQVEAALLLLERCADRKAKLVITGVGKSGIVARKIAATFSSIGLMALFLNPLDALH 91

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           GDLG++  +D+ ++LS SG ++EL  +L + +R     IAI     S +A  +D+VL   
Sbjct: 92  GDLGVVAPEDVCLLLSNSGETEELLEVLPHLKRRGTGRIAIVGRADSSLARGSDVVLEAG 151

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASD 222
            + E CP  LAPT S  + +AIGDALA   +E R  S  DF + HP G LG      A+D
Sbjct: 152 VDREVCPLNLAPTASTAVAMAIGDALAAVWMERRGISPADFALNHPAGSLGKQLTLTAAD 211

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKD- 279
           +M     +  +    PL + I  L+    G   V        L G++T+GD+ R      
Sbjct: 212 LMVPVSKLHPLHPHTPLPEVIGGLTRDGIGSGWVEHPEQPGSLVGLLTDGDLRRALQDHS 271

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQK 325
               ++L+  D+M ++P  +  D L+  A++ +  +    ISVL VV + ++
Sbjct: 272 ADSWSSLTAADLMTRDPITVNGDVLVVKALEQMEHNRRKPISVLPVVGEQKR 323


>gi|315453547|ref|YP_004073817.1| Arabinose 5-phosphate isomerase [Helicobacter felis ATCC 49179]
 gi|315132599|emb|CBY83227.1| Arabinose 5-phosphate isomerase [Helicobacter felis ATCC 49179]
          Length = 325

 Score =  247 bits (632), Expect = 1e-63,   Method: Composition-based stats.
 Identities = 94/307 (30%), Positives = 157/307 (51%), Gaps = 9/307 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A  ++      L+  + SL      +    +  +      V + G+GKS HIG K+ +TL
Sbjct: 10  ASNTLHLAIDALTHAKESLSH---AKLEPIITCLANAP-LVAVMGVGKSAHIGRKITATL 65

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
            STGT + F+H  EA HGD+G++   D+I+ +S+ G S EL   L +     I  I ++ 
Sbjct: 66  TSTGTKAVFLHPTEALHGDMGIVGEKDVILAISYGGESAELLEALRFIPCGGI--IGMSK 123

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
              S +   ++  L+L  + E+C   + PTTS  + LA+GD LA+ L+  + F+++DF  
Sbjct: 124 SPNSSLGKLSNHHLSLNIKKEACSFNMVPTTSTTLSLALGDVLAVCLMAHKGFTQSDFAR 183

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            HPGG LG         ++   ++PLV     L +A+   + +  G   +VDE QKL G+
Sbjct: 184 YHPGGLLGKKMHLRVRDIYRTHALPLVSAQASLHEALLEATHQGLGNALLVDENQKLVGV 243

Query: 267 ITEGDIFRNFHKDLNT--LSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +++GDI R   +          +    NPK I   + L+  A+  +  H IS+L+V+D  
Sbjct: 244 LSDGDIRRALLEPHFDRSAPAREFATLNPKTIQDPNMLVLDALNFIETHQISLLIVLDAH 303

Query: 324 QKAIGIV 330
           +K +G+V
Sbjct: 304 KKVLGVV 310


>gi|195641434|gb|ACG40185.1| hypothetical protein [Zea mays]
          Length = 347

 Score =  247 bits (631), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 105/321 (32%), Positives = 165/321 (51%), Gaps = 18/321 (5%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L+ L S+ +  L   F            + +    G V  TG+GKSG +  K A TLAS 
Sbjct: 27  LAPLFSAQRRHLDHFFDRLDMAQAAAFAQALLDAPGAVFFTGVGKSGIVARKTAQTLASL 86

Query: 90  GT-PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           G   + F+   +A HGD+G +   D++++LS SG+SDEL A+   AR     L+++TS  
Sbjct: 87  GLARAGFLAPVDALHGDIGALFPGDVLVILSKSGASDELLALAPCARAKGAYLVSLTSAA 146

Query: 149 KS---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
                 +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + + 
Sbjct: 147 SGDDCPLAAACDLNVHLPLQGEVCPFGLAPVTSTAIQMVFGDTVIAAIMEARRLSRDQYA 206

Query: 206 VLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             HP GK+G TL     DVM   + +PL K G  ++D +T L+ K  GC+ VVDE   L 
Sbjct: 207 SNHPAGKIGKTLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDEEHHLI 266

Query: 265 GIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMV 319
           G  T+GD+ R        + +L+V ++  +NP+ I  + +   AM+ +      +  L V
Sbjct: 267 GTFTDGDLRRTLKASGPAIFSLTVGEMCNRNPRTITAEAMAVEAMEKMEAPPSPVQFLPV 326

Query: 320 VDDCQKAIGIVHFLDLLRFGI 340
           V++     GI+    L+  G+
Sbjct: 327 VNENNVVCGIITLHGLVSAGL 347


>gi|167041250|gb|ABZ06006.1| putative CBS domain protein [uncultured marine microorganism
           HF4000_005D21]
 gi|167045754|gb|ABZ10400.1| putative SIS domain protein [uncultured marine bacterium
           HF4000_APKG3108]
          Length = 324

 Score =  247 bits (630), Expect = 2e-63,   Method: Composition-based stats.
 Identities = 110/327 (33%), Positives = 179/327 (54%), Gaps = 12/327 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +Q A +++  E + L  L SS     S QF  AV  I  IKG+ ++ G+GKS  +G 
Sbjct: 2   NKDLQIAKKTVQTEIQALKRLLSSFDR--SSQFSKAVNLISKIKGKCLVVGVGKSYLVGL 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSI 139
           K++STL+S GTPS    A +  HG LG I ++ D +++ S SG S EL +IL YA R ++
Sbjct: 60  KVSSTLSSLGTPSVAFSANDLQHGGLGAIQKNHDALLMFSVSGESSELNSILRYANRHNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+I ++ ++ S++  ++ I + LPK  E+  H LAPT+S++   + GD+LAIA ++ + +
Sbjct: 120 PVIGVSCKSSSMLLRYSTIKILLPKVIEAG-HSLAPTSSSLNFFSWGDSLAIACMKRKKW 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + N F   HP G L T  +   ++M     IPL+     L  A+  +++K+ G V V ++
Sbjct: 179 TNNKFITTHPSGTLATALIQVKEIMAKKKEIPLISANQTLRAALAEMTKKKLGIVCVKEK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             K+  +IT+GDI RN   +L    +  V  KNP  I +      A++ +    I+ L+V
Sbjct: 239 NGKI-NLITDGDIRRN-SNNLYKKKILQVCSKNPTWISDTATALTAIEKINALKITSLLV 296

Query: 320 VDDCQ------KAIGIVHFLDLLRFGI 340
             +        K +G++H    L  GI
Sbjct: 297 AKNQDIKKKIKKIVGVLHLHHCLSRGI 323


>gi|210135590|ref|YP_002302029.1| polysialic acid capsule expression protein [Helicobacter pylori
           P12]
 gi|210133558|gb|ACJ08549.1| polysialic acid capsule expression protein [Helicobacter pylori
           P12]
          Length = 329

 Score =  247 bits (630), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 109/327 (33%), Positives = 172/327 (52%), Gaps = 7/327 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M       A + +  E   L  LES  Q +        V+ I   +   G++VI G+GKS
Sbjct: 3   MPLDYNAIAAQVLKDEASAL--LESVKQFQKPNDLEAIVKLILKSQEKGGKLVIVGVGKS 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +  K+ +++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL  ++ + +
Sbjct: 61  ALVAQKITASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGESLELLNLVSHLK 120

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GD L   L+ 
Sbjct: 121 RLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDVLMACLMR 180

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SEKR G   
Sbjct: 181 AKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLILPSTSFKDALIEMSEKRLGSAI 240

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
           +V+   +L G++++GD+ R   K ++  S V       PK     D LL  A++ L +H 
Sbjct: 241 LVNGANELVGVLSDGDVRRALLKGVSLKSEVRHFATLKPKSFKNLDALLLEALEFLERHK 300

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I +L+ VDD  K +G++H   LL  G+
Sbjct: 301 IQILVCVDDYNKVLGVLHLHQLLELGL 327


>gi|300173238|ref|YP_003772404.1| arabinose 5-phosphate isomerase [Leuconostoc gasicomitatum LMG
           18811]
 gi|299887617|emb|CBL91585.1| arabinose 5-phosphate isomerase [Leuconostoc gasicomitatum LMG
           18811]
          Length = 318

 Score =  246 bits (629), Expect = 3e-63,   Method: Composition-based stats.
 Identities = 102/321 (31%), Positives = 159/321 (49%), Gaps = 10/321 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            +    A  +   E   L     +++  L   F   VE I   KGR +   IGKSG I  
Sbjct: 2   TNYFDDAKITFDTEIAAL----QTVRETLDENFDEVVEAILNTKGRSIFIAIGKSGIIAE 57

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS-- 138
           K+A++L+S G PSFF+ A  A HGDLG ++ DDL+I +S SG + E+   L+  +     
Sbjct: 58  KIAASLSSVGVPSFFIDAGTAYHGDLGRVSADDLVIFISNSGETQEVVQTLFALKNIHQN 117

Query: 139 -IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +  IA+T    + +A + DI L +    E+ P  LAPT+S    L +GDAL IA+ +++
Sbjct: 118 ELKTIALTGSEDATLAKNTDIFLKVDVAEEADPTKLAPTSSTTATLVMGDALLIAVEKAK 177

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   DF + HPGG +G + +              V+   P+ D I  +S+   G   V 
Sbjct: 178 AFKRADFALYHPGGSIGKMLLRDVAHSMHTKIPY-VQTTTPINDVIYRISDFGVGMTLVK 236

Query: 258 DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
              +K+ GIIT+GDI + F     +   +  D M +    I ++   + A + +  +NIS
Sbjct: 237 TPEEKVIGIITDGDIRKKFLYINQVKNSTAADYMTEGFISINQNARNSAAWKKMASNNIS 296

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            L+V DD    +GI+   D+L
Sbjct: 297 NLVVKDDDDSVVGIITIHDVL 317


>gi|301165950|emb|CBW25523.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 337

 Score =  246 bits (628), Expect = 5e-63,   Method: Composition-based stats.
 Identities = 100/324 (30%), Positives = 155/324 (47%), Gaps = 7/324 (2%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S ++     +  E + +    S L+            K+    G +V  G+GKSG IG+K
Sbjct: 12  SKIEILRDVLNLEAKSIEIAASKLKSAEVELMEEVFNKLILSGGDIVFCGVGKSGLIGAK 71

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LAST  S G  SF +H  EA HGDLG +   D+I+ LS SG+++E+  IL + +      
Sbjct: 72  LASTFTSLGLRSFLLHPTEALHGDLGRVRESDVIVFLSKSGTTEEILKILPFLKVKKENR 131

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I +     S +     +V     E E+C +  APTTS+ + LA+GDALA+      N S+
Sbjct: 132 IGLLGAVDSPIGKECAVVFDCSVEKEACINNQAPTTSSTVSLAMGDALAVLFEHIVNLSK 191

Query: 202 NDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             F   HPGG LG    +   D+M       +V     L D I  ++++  G  AV+D  
Sbjct: 192 EGFAENHPGGFLGKSLRMKVQDLMSHKKDCAVVDSKATLKDVILEMTQRPLGACAVID-N 250

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLR--QHNISV 316
            K  G+I EGDI R        L V   +++   P  +   TL   A+ L+   +  ++V
Sbjct: 251 NKFVGLIVEGDIRRCLSTGDGNLQVSVTNILNAKPSTVSRATLAFDALGLMENRERPLNV 310

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           + VV+  +   G++   DLL+ G+
Sbjct: 311 VPVVEGSE-FYGLIRLHDLLKAGL 333


>gi|297520154|ref|ZP_06938540.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 251

 Score =  245 bits (626), Expect = 6e-63,   Method: Composition-based stats.
 Identities = 106/255 (41%), Positives = 154/255 (60%), Gaps = 5/255 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1   MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L+A+T +  S +   A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R 
Sbjct: 117 IALLAMTGKPTSPLGLAAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARG 176

Query: 199 FSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E DF   HP G LG  L      +M   D+IP V +   ++DA+  LS    G VAV 
Sbjct: 177 FNEEDFARSHPAGALGARLLNKVHHLMRRDDAIPQVALTASVMDAMLELSRTGLGLVAVC 236

Query: 258 DEGQKLKGIITEGDI 272
           D  Q+++G+ T+GD+
Sbjct: 237 DAQQQVQGVFTDGDL 251


>gi|289824455|ref|ZP_06544031.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
          Length = 249

 Score =  245 bits (625), Expect = 9e-63,   Method: Composition-based stats.
 Identities = 92/249 (36%), Positives = 135/249 (54%), Gaps = 2/249 (0%)

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
             H AEA HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +  
Sbjct: 1   MFHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGR 60

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG
Sbjct: 61  AAKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALG 120

Query: 215 -TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             L      +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ 
Sbjct: 121 ARLLNNVHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLR 180

Query: 274 RNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R        T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++ 
Sbjct: 181 RWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINL 240

Query: 333 LDLLRFGII 341
            D  + GII
Sbjct: 241 QDFYQAGII 249


>gi|209967037|ref|YP_002299952.1| sugar isomerase, KpsF [Rhodospirillum centenum SW]
 gi|209960503|gb|ACJ01140.1| sugar isomerase, KpsF [Rhodospirillum centenum SW]
          Length = 330

 Score =  243 bits (620), Expect = 4e-62,   Method: Composition-based stats.
 Identities = 92/326 (28%), Positives = 150/326 (46%), Gaps = 13/326 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E + + + E SL       F   V  I       ++ G+GKSG I  
Sbjct: 5   DPIIASARDLLHIEAKTVLAQEQSL----DDGFLNVVNHIGTRDTNTLVAGVGKSGLIAR 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            LAS LAS GT +++    +A HG+LG +  DDL+I+LS SG + EL  +   A +    
Sbjct: 61  LLASKLASVGTRAWYYSTTDALHGELGGLRPDDLLILLSNSGQTRELVDLGRCAIQRGAR 120

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + A+ S   S ++  AD  L +  E E+      PT S    LA+GDAL IA+   R F+
Sbjct: 121 VAAMVSRVPSALSRIADWTLRVHVEREAT-ETRLPTASTAAMLALGDALVIAVARRRGFT 179

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMH--SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +++   HPGG LG +       +   +   + LV     +++ +  ++    G   VVD
Sbjct: 180 VDEYARNHPGGTLGVVLGSRVADLMVKAPGGVALVTPETSVVETLLAMTRHPNGAALVVD 239

Query: 259 EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ-HNI 314
              +L GI+TEGD+ R      K+   +     M   P+          A++++     I
Sbjct: 240 ADGRLAGIVTEGDVRRGLSAHGKNFLEMDTRACMGAAPRTCGPSITALEALEIMETPTQI 299

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFGI 340
            VL VVD   + +G++   D+   G+
Sbjct: 300 YVLPVVDGDGRVLGLIRMHDI--AGL 323


>gi|297183460|gb|ADI19591.1| predicted sugar phosphate isomerase involved in capsule formation
           [uncultured SAR11 cluster bacterium HF0770_37D02]
          Length = 323

 Score =  242 bits (618), Expect = 6e-62,   Method: Composition-based stats.
 Identities = 105/327 (32%), Positives = 182/327 (55%), Gaps = 13/327 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +Q A +++  E + L  L +S    L  QF  AV  +  +KG+ ++ G+GKS  +G 
Sbjct: 2   NKDIQIAKKTVQTEIQALKKLLASFGRSL--QFSKAVNLLSKMKGKCLVVGVGKSYLVGL 59

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSI 139
           K+++TL+S G PS    A++  HG LG I ++ D+++V S SG S EL  IL YA R ++
Sbjct: 60  KVSATLSSLGIPSVAFSASDLQHGGLGTIQKNRDVLLVFSVSGESSELNNILRYANRHNV 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I ++ ++ S++  ++ I + LPK  E+  H LAPT+S++  L+ GD+LAIA ++ + +
Sbjct: 120 SVIGVSCKSASMLLRYSTIKILLPKVVEAG-HSLAPTSSSLNFLSWGDSLAIACMKRKKW 178

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++  F   HP G L T  +   ++M  G  IPL+     +  A+T +S+K+ G V V ++
Sbjct: 179 TDKKFITTHPSGVLATALIQVKEIMAKGKEIPLISSNKTMKTAVTEMSKKKLGVVCVKEK 238

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              +  ++T+GDI R+   +L    +++V  KNP  I E+     A++ +    I+ L+V
Sbjct: 239 NSIM--LLTDGDIRRH-SNNLYKKKLKNVATKNPAWISENATALSAIEKMNSLKITSLLV 295

Query: 320 VDDCQ------KAIGIVHFLDLLRFGI 340
             +          +GI+H    L  GI
Sbjct: 296 SRNQNTKKRIKNVVGILHLHHCLSRGI 322


>gi|261884782|ref|ZP_06008821.1| KpsF/GutQ [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 262

 Score =  238 bits (608), Expect = 8e-61,   Method: Composition-based stats.
 Identities = 93/258 (36%), Positives = 149/258 (57%), Gaps = 5/258 (1%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K   +  A   +  E   L          L F+F  AV    + KG+++I+G+GKSG +G
Sbjct: 9   KMDILSIAKEVLSLEADEL----KRQVELLDFKFEKAVNLALSCKGKLIISGVGKSGLVG 64

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGTPSFF+H  EA HGDLGMI+++D ++ +S+SG S EL  IL + ++  I
Sbjct: 65  AKIAATLASTGTPSFFLHPTEALHGDLGMISQNDAVLAISFSGESSELLLILPHIKKRGI 124

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I + +++ S +   +D  ++L    E+CP G APT S  + LA+GDALA+ L++ + F
Sbjct: 125 KIIGM-AKSGSSLEMLSDAFISLDIVREACPLGAAPTVSTTLTLALGDALAVCLMQLKEF 183

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            + DF +LHPGG LG         +   D +P+V     L  AI  ++  + G V + ++
Sbjct: 184 KKEDFAMLHPGGSLGKRLYLKVKDVMRKDELPIVSDDVSLKFAINSMTHGKLGTVLLTNK 243

Query: 260 GQKLKGIITEGDIFRNFH 277
              L  ++++GD+ R   
Sbjct: 244 NGLLVTVLSDGDLRRALG 261


>gi|208435297|ref|YP_002266963.1| polysialicacid capsule expression protein [Helicobacter pylori G27]
 gi|208433226|gb|ACI28097.1| polysialicacid capsule expression protein [Helicobacter pylori G27]
          Length = 277

 Score =  234 bits (598), Expect = 1e-59,   Method: Composition-based stats.
 Identities = 100/274 (36%), Positives = 157/274 (57%), Gaps = 2/274 (0%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G S EL 
Sbjct: 2   IVGVGKSALVAQKIAASMLSTGNRSTFLHPTEAMHGDLGMVEKNDVILMISYGGESLELL 61

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++ + +R S  +I  T    S ++   D  L+L  + E+CP   APTTS  + LA+GDA
Sbjct: 62  NLVSHLKRLSHKIITFTKSPNSSLSKLGDYYLSLKIKKEACPINTAPTTSTTLTLALGDA 121

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           L   L+ ++NFS+ DF   HPGG LG         +    ++PL+       DA+  +SE
Sbjct: 122 LMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDLLQTTNLPLILPSTSFKDALIEMSE 181

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI-LEDTLLTVAM 306
           KR G   +V+E  +L G++++GD+ R   K ++  S V+      PK     D LL  A+
Sbjct: 182 KRLGSAILVNEANELVGVLSDGDVRRALLKGVSLKSEVKHFATLKPKSFKNLDALLLEAL 241

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 242 EFLERHKIQILVCVDDHNKVLGVLHLHQLLELGL 275


>gi|213029624|ref|ZP_03344071.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 218

 Score =  230 bits (586), Expect = 3e-58,   Method: Composition-based stats.
 Identities = 97/209 (46%), Positives = 133/209 (63%), Gaps = 5/209 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVLHPGGKLGTL-FVCASDVMHSGDSIPL 232
            + HPGG LG    +  SD+MH+GD IP 
Sbjct: 190 ALSHPGGALGRKLLLRVSDIMHTGDEIPH 218


>gi|330863202|emb|CBX73329.1| protein gutQ [Yersinia enterocolitica W22703]
          Length = 236

 Score =  225 bits (574), Expect = 8e-57,   Method: Composition-based stats.
 Identities = 89/235 (37%), Positives = 127/235 (54%), Gaps = 2/235 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D++I +S+SG + EL  IL       IP+IAIT   +S +A  A  VL +  E E
Sbjct: 1   MIGSQDVLIFISYSGRAKELDLILPLLADSHIPVIAITGGLESPLAQGAACVLDISVEHE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP GLAPT+SA+  L +GDALA+AL+  R F+  DF   HPGG LG  L      +M +
Sbjct: 61  ACPMGLAPTSSAVNTLMMGDALAMALMRHRGFNAEDFARSHPGGSLGARLINRVHHLMRT 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           GD +P+V     +++A+  LS    G VA+ D  QK+ G+ T+GD+ R   K        
Sbjct: 121 GDRLPVVNESDSVMEAMLELSRTGLGLVAICDPNQKVVGVFTDGDLRRWLVKGGTLQQQL 180

Query: 287 DVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              I  P   L +      A++ L QH+IS   VVD   K +G ++  DL + G+
Sbjct: 181 GGAITRPGFRLPEQWRAGEALEALHQHHISAAPVVDLDGKLVGAINLHDLHQAGV 235


>gi|213418627|ref|ZP_03351693.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 236

 Score =  225 bits (573), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 83/236 (35%), Positives = 126/236 (53%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNVHHLMRQ 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
           GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R        T  V
Sbjct: 121 GDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 SEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|145631470|ref|ZP_01787239.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
 gi|144982900|gb|EDJ90413.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
          Length = 228

 Score =  224 bits (572), Expect = 1e-56,   Method: Composition-based stats.
 Identities = 82/228 (35%), Positives = 129/228 (56%), Gaps = 5/228 (2%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           M+   D+++++S+SG +D++  ++   + F   +IA+TS   S +A HAD VL +  E E
Sbjct: 1   MLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKIIAVTSNKNSTLARHADYVLDITVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
            CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF   HPGG LG   +C        
Sbjct: 61  VCPNNLAPTTSALVTLALGDALAVSLITARNFQPADFAKFHPGGSLGRRLLCKVKDQMQT 120

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---S 284
                +       D +T+++E R G   V+ E ++LKGIIT+GDI R    +       +
Sbjct: 121 RLPT-ILPNTNFTDCLTVMNEGRMGVALVM-ENEQLKGIITDGDIRRALTANGAETLNKT 178

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +D M  +PK I +D  L+ A   ++   I  L+VV+D    +G+V F
Sbjct: 179 AKDFMTSSPKTIHQDEFLSKAEDFMKAKKIHSLVVVNDENHVVGLVEF 226


>gi|87198751|ref|YP_496008.1| KpsF/GutQ family protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|87134432|gb|ABD25174.1| KpsF/GutQ family protein [Novosphingobium aromaticivorans DSM
           12444]
          Length = 340

 Score =  222 bits (565), Expect = 8e-56,   Method: Composition-based stats.
 Identities = 103/286 (36%), Positives = 162/286 (56%), Gaps = 4/286 (1%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
            F  AV  + +  GRV ++G+GKSGH+  K+ASTL+STG P+ F+H  EA HGDLGM+  
Sbjct: 49  SFDAAVSLLHSGGGRVFVSGVGKSGHVARKIASTLSSTGRPACFIHPVEAMHGDLGMLCP 108

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++IVLS SG+S EL+ ++ +A+R S  ++AI +   S +   ADI L +P  PE+CP 
Sbjct: 109 GDVLIVLSNSGASMELRGLVDHAQRLSARIVAIGARPDSPLMRVADIALVIPDGPEACPV 168

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            +APTTS  M LA+GDALA+A++ +R        +LHPGG +G      ++ +   D++P
Sbjct: 169 NIAPTTSTTMMLALGDALAVAVMSARGIGVERIRLLHPGGPIGERL-RVAEDVMRTDALP 227

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           LV +  P+ + +  ++    G   VV  G  L G+I E D      +DL       +M +
Sbjct: 228 LVGVEDPMPEVLLCMARSGLGIAGVVALGGGLVGVI-EADRLPAVARDLAGERAGFLMNR 286

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDL 335
           +  V   +T L    + L        +V+  ++ ++ IG+V   +L
Sbjct: 287 HAWVARRETPLDEIARNLGVGGSDAALVIAGENDRRPIGVVSARNL 332


>gi|227512653|ref|ZP_03942702.1| possible arabinose-5-phosphate isomerase [Lactobacillus buchneri
           ATCC 11577]
 gi|227084118|gb|EEI19430.1| possible arabinose-5-phosphate isomerase [Lactobacillus buchneri
           ATCC 11577]
          Length = 280

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 84/280 (30%), Positives = 143/280 (51%), Gaps = 9/280 (3%)

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           K   +  GIGKS  I  K++++L+S G  SF + AA A HGDLG + ++D ++++S SG 
Sbjct: 3   KNPTIYIGIGKSEIIAEKISASLSSIGQSSFTIDAATAFHGDLGRLAKNDTVLLVSNSGE 62

Query: 124 SDELKAILYYAR---RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           + E+   L+  +      I  +A+T    S +A + D+V+ L  + E+   G+AP +S  
Sbjct: 63  TQEVVQTLFAMKTIFPNGISTVALTGNPNSTLAKNTDLVINLSVKKEANVTGVAPISSTT 122

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPL 239
             L +GDAL +AL + R+F +  F   HPG  +G +       VMH+   IP V+    +
Sbjct: 123 ATLVLGDALLVALEKIRSFDKKQFAQYHPGVSIGKMLLQQVKHVMHT--KIPYVEEDTKI 180

Query: 240 IDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVI 296
            D I  +S    G   V D E  ++  ++T GDI + F     +   +  D M +    I
Sbjct: 181 NDVIYTISNLGLGITLVRDIETNQITRVVTYGDIRKKFLDVPAVKRSTARDYMTRFFVSI 240

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     A +++   NIS L+V D+    +G++   ++L
Sbjct: 241 NQEKRNRDAWRMMASRNISNLIVRDNDDHVVGVITIHNVL 280


>gi|297744159|emb|CBI37129.3| unnamed protein product [Vitis vinifera]
          Length = 304

 Score =  219 bits (558), Expect = 5e-55,   Method: Composition-based stats.
 Identities = 89/317 (28%), Positives = 149/317 (47%), Gaps = 48/317 (15%)

Query: 38  LSSLESSLQGELSFQFHCA--------VEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           L +L  + Q  L+F FH           + +  I+G +  TG+GKSG +  K++ TL   
Sbjct: 22  LMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTIFFTGVGKSGFVAQKISQTL--- 78

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
                                          SG+S+EL  +   A+     LI++TS   
Sbjct: 79  -------------------------------SGNSEELLKLAPCAKAKGAYLISVTSTED 107

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           +++    D+ + LP E E CP  LAP TS  +Q+  GD +A+AL+ +RN + +++   HP
Sbjct: 108 NLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVFGDTVAVALMGARNLTRDEYAANHP 167

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G++G        DVM   D +P+ K G  ++D +  L+ K  GC+ V+D+  +L G  T
Sbjct: 168 AGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFT 227

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDC 323
           +GD+ R      + +  L+V  +  +NP+ I  + +   AM+ +      +  L V+DD 
Sbjct: 228 DGDLRRTLKASGEGIFKLTVGQMCNRNPRTISSNVMAVDAMRRMEAPPSPVQFLPVLDDQ 287

Query: 324 QKAIGIVHFLDLLRFGI 340
              IGIV    L+  G+
Sbjct: 288 NVLIGIVTLHGLVSAGL 304


>gi|270659742|ref|ZP_06222389.1| polysialic acid capsule expression protein KpsF [Haemophilus
           influenzae HK1212]
 gi|270316919|gb|EFA28616.1| polysialic acid capsule expression protein KpsF [Haemophilus
           influenzae HK1212]
          Length = 189

 Score =  219 bits (557), Expect = 6e-55,   Method: Composition-based stats.
 Identities = 90/191 (47%), Positives = 121/191 (63%), Gaps = 4/191 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A  S+  E   L  L   L       F+  V+ I A KGR+VI GIGKSG IG K+ +T
Sbjct: 1   IAQNSLSVESNALLQLSQRL----GEDFNQVVDLILACKGRLVIGGIGKSGLIGKKMVAT 56

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D+   ++   + F   +IA+T
Sbjct: 57  FASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDANKLIPSLKNFGNKIIAVT 116

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF   DF 
Sbjct: 117 SNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQPEDFA 176

Query: 206 VLHPGGKLGTL 216
             HPGG LG  
Sbjct: 177 KFHPGGSLGRR 187


>gi|332755584|gb|EGJ85947.1| arabinose 5-phosphate isomerase [Shigella flexneri 2747-71]
          Length = 236

 Score =  218 bits (556), Expect = 9e-55,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRR 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
            D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R        T  V
Sbjct: 121 DDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 NEAMTTGGTTLQAQSRAIDAKEVLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|323935737|gb|EGB32051.1| KpsF/GutQ family protein sugar isomerase [Escherichia coli E1520]
          Length = 236

 Score =  217 bits (554), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 80/236 (33%), Positives = 125/236 (52%), Gaps = 2/236 (0%)

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           MI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL +  E E
Sbjct: 1   MIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLDISVERE 60

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHS 226
           +CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L      +M  
Sbjct: 61  ACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKVHHLMRR 120

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSV 285
            D+IP V +   ++DA+  LS    G VAV D  Q+++G+ T+GD+ R        T  V
Sbjct: 121 DDAIPQVALTASVMDAMLELSRTGLGLVAVCDAQQQVQGVFTDGDLRRWLVGGGALTTPV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + M      +   +    A ++L +  I+   VVD+  K  G ++  D  + GII
Sbjct: 181 NEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGKLTGAINLQDFYQAGII 236


>gi|289803127|ref|ZP_06533756.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 192

 Score =  217 bits (554), Expect = 2e-54,   Method: Composition-based stats.
 Identities = 83/183 (45%), Positives = 116/183 (63%), Gaps = 4/183 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R F+  DF
Sbjct: 130 TGRPESSMARAADVHLCVKVPKEACPLGLAPTSSTTATLVMGDALAVALLKARGFTAEDF 189

Query: 205 YVL 207
            + 
Sbjct: 190 ALS 192


>gi|145641070|ref|ZP_01796651.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           R3021]
 gi|145274231|gb|EDK14096.1| probable phosphosugar isomerase HI1678 [Haemophilus influenzae
           22.4-21]
          Length = 240

 Score =  215 bits (548), Expect = 8e-54,   Method: Composition-based stats.
 Identities = 84/198 (42%), Positives = 123/198 (62%), Gaps = 2/198 (1%)

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T ASTGTPSFF+H  EA HGDLGM+   D+++++S+SG +D++  ++   + F   +
Sbjct: 1   MVATFASTGTPSFFLHPTEAFHGDLGMLKPIDIVMLISYSGETDDVNKLIPSLKNFGNKI 60

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+TS   S +A HAD VL +  E E CP+ LAPTTSA++ LA+GDALA++L+ +RNF  
Sbjct: 61  IAVTSNKNSTLARHADYVLDITVEREVCPNNLAPTTSALVTLALGDALAVSLITARNFQP 120

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF   HPGG LG   +C             +       D +T+++E R G   V+ E +
Sbjct: 121 ADFAKFHPGGSLGRRLLCKVKDQMQTRLPT-ILPTTNFTDCLTVMNEGRMGVALVM-ENE 178

Query: 262 KLKGIITEGDIFRNFHKD 279
           +LKGIIT+GDI R    +
Sbjct: 179 QLKGIITDGDIRRALTAN 196


>gi|125580879|gb|EAZ21810.1| hypothetical protein OsJ_05449 [Oryza sativa Japonica Group]
          Length = 313

 Score =  215 bits (547), Expect = 9e-54,   Method: Composition-based stats.
 Identities = 96/317 (30%), Positives = 144/317 (45%), Gaps = 42/317 (13%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
           A++R L      L    +  F  A   +    G V  TG+GKSG +  KLA TLAS    
Sbjct: 30  AQRRHLDHFFDRLDLSQAAAFAQA---LVDAPGAVFFTGVGKSGIVARKLAQTLAS---- 82

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS-- 150
                                       SG+SDEL A+   AR     LI++TS      
Sbjct: 83  --------------------------PRSGASDELLALAPCARAKGAHLISLTSAASGAD 116

Query: 151 -VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
             +A   D+ + LP + E CP GLAP TS  +Q+  GD +  A++E+R  S + +   HP
Sbjct: 117 CPLAAVCDLNVHLPLQAEVCPFGLAPVTSTAIQMVFGDTVVAAIMEARRLSRDQYASNHP 176

Query: 210 GGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            GK+G        DVM   + +PL K G  ++D +T L+ K  GC+ VVD+   L G  T
Sbjct: 177 AGKIGKSLIFKVKDVMKKQNELPLCKEGDMIMDQLTELTSKGCGCLLVVDDEYHLIGTFT 236

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDC 323
           +GD+ R      + +  L+V ++  ++P+ I  D +   AM+ +      +  L VVD  
Sbjct: 237 DGDLRRTLKASGQAIFNLTVGEMCNRHPRTITADAMAVQAMEKMESPPSPVQFLPVVDSN 296

Query: 324 QKAIGIVHFLDLLRFGI 340
               GI+    L+  G+
Sbjct: 297 NVVCGIITLHGLVSAGL 313


>gi|332971437|gb|EGK10392.1| arabinose 5-phosphate isomerase [Kingella kingae ATCC 23330]
          Length = 221

 Score =  215 bits (547), Expect = 1e-53,   Method: Composition-based stats.
 Identities = 83/211 (39%), Positives = 124/211 (58%), Gaps = 3/211 (1%)

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R +  LI ITS+ +S +A HADI +      E+CP GLAPT+S    LA+GDALAI L
Sbjct: 11  LKRKNTTLICITSKPQSSMAKHADIHIQAAVSQEACPLGLAPTSSTTAVLALGDALAIVL 70

Query: 194 LESRNFSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L++R F+  DF + HP G LG    +   ++MHS   +P V+    L  AI  +SEK  G
Sbjct: 71  LKARQFTSEDFALNHPAGSLGRRLLLTVGNLMHSDSELPAVEEHTLLKTAIVKMSEKGLG 130

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            +A+VD    LKGI+T+GD+ R F K      L+V DVM  +P  I  + L + A++ ++
Sbjct: 131 MLAIVDASGCLKGILTDGDLRRLFEKRDTFAGLTVNDVMHVSPHSITPEKLASEAVKFMQ 190

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +S L+V D+  K +G ++  DLL+  ++
Sbjct: 191 DKRVSGLLVCDEAGKLVGALNMHDLLKARVV 221


>gi|226940938|ref|YP_002796012.1| Sugar isomerase, KpsF/GutQ family [Laribacter hongkongensis HLHK9]
 gi|226715865|gb|ACO75003.1| Sugar isomerase, KpsF/GutQ family [Laribacter hongkongensis HLHK9]
          Length = 259

 Score =  213 bits (544), Expect = 2e-53,   Method: Composition-based stats.
 Identities = 96/193 (49%), Positives = 124/193 (64%), Gaps = 4/193 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A   +  E + + SL S L       F  AV+ + A  GRVV+TG+GKSGH+  K+A
Sbjct: 18  LALARDVLSTEAQAIESLSSRLDET----FLAAVDAMLATTGRVVVTGMGKSGHVARKIA 73

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+FFVH AEA+HGDLGMI   D+++ LS SG SDE+ A+L   RR  + LIA
Sbjct: 74  ATLASTGTPAFFVHPAEAAHGDLGMILSGDVVLALSNSGESDEVIALLPAMRRKQVTLIA 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  ADI L    E E+CP GLAPT+S    LA+GDALA+ LL++RNF   D
Sbjct: 134 MTGRTGSTLAREADIHLDAAVEREACPLGLAPTSSTTAALALGDALAVTLLDARNFRAED 193

Query: 204 FYVLHPGGKLGTL 216
           F + HP G LG  
Sbjct: 194 FAMSHPAGSLGRR 206


>gi|28210619|ref|NP_781563.1| polysialic acid capsule expression protein kpsF [Clostridium tetani
           E88]
 gi|28203057|gb|AAO35500.1| polysialic acid capsule expression protein kpsF [Clostridium tetani
           E88]
          Length = 203

 Score =  209 bits (533), Expect = 4e-52,   Method: Composition-based stats.
 Identities = 81/202 (40%), Positives = 117/202 (57%), Gaps = 4/202 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +M    +      +  E + + +    +   L   +  AV+ I   KG+VV TG+GKSGH
Sbjct: 1   MMNKDVLFSIKEVMEEEIKAIKN----VCENLDENYEKAVDLIHNCKGKVVFTGVGKSGH 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           IG KLA+T ASTGTP+FFVH+ EA HGDLGMI   D++I +S SG + E+ +I+   +  
Sbjct: 57  IGEKLAATFASTGTPAFFVHSTEALHGDLGMIEEKDIVIAISNSGETKEVLSIISSIKYI 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +I+IT  N S +A  +D+ L    + E+ P  LAPT+S+ + L +GDALAI L + +
Sbjct: 117 GSKIISITGNNNSSLAKESDVALEAKVDHEADPLNLAPTSSSTVALVLGDALAITLSQLK 176

Query: 198 NFSENDFYVLHPGGKLGTLFVC 219
            F   +F V HPGG LG     
Sbjct: 177 EFKRENFAVFHPGGSLGKRLFN 198


>gi|332799741|ref|YP_004461240.1| Arabinose-5-phosphate isomerase [Tepidanaerobacter sp. Re1]
 gi|332697476|gb|AEE91933.1| Arabinose-5-phosphate isomerase [Tepidanaerobacter sp. Re1]
          Length = 203

 Score =  207 bits (528), Expect = 2e-51,   Method: Composition-based stats.
 Identities = 85/202 (42%), Positives = 127/202 (62%), Gaps = 4/202 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ A + +  E + + S+ +++       F  AV+ +   KGRVV++G+GKSGHIG K
Sbjct: 2   EIIETARQVMETELKAIKSVSTTI----GEDFEAAVKAMYECKGRVVVSGLGKSGHIGKK 57

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           LA+TL+STGTPSFFVHA EA HGDLGMIT+DD+++ +S SG + EL  ++   R     +
Sbjct: 58  LAATLSSTGTPSFFVHATEALHGDLGMITKDDIVLAISNSGETKELLNMIPSVRIIGAKI 117

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I+IT   +S +A  +DI + +  E E+ P  LAPT+S+   LA+GD++AI L   + F E
Sbjct: 118 ISITGSKESTLAKCSDINIEVKVENEADPLNLAPTSSSTATLAVGDSIAITLSVMKGFKE 177

Query: 202 NDFYVLHPGGKLGTLFVCASDV 223
            +F V HPGG LG   +    +
Sbjct: 178 ENFAVFHPGGSLGKKLLEKHKL 199


>gi|320089684|pdb|2XHZ|A Chain A, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089685|pdb|2XHZ|B Chain B, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089686|pdb|2XHZ|C Chain C, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
 gi|320089687|pdb|2XHZ|D Chain D, Probing The Active Site Of The Sugar Isomerase Domain From
           E. Coli Arabinose-5-Phosphate Isomerase Via X-Ray
           Crystallography
          Length = 183

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 80/174 (45%), Positives = 111/174 (63%), Gaps = 4/174 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+  L+ L+  +       F  A EK+   KG+VV+ G+G SGHIG K+A+
Sbjct: 14  QAGKEVLAIERECLAELDQYINQ----NFTLACEKMFWCKGKVVVMGMGASGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           T   +S +A  AD+ L +    E+CP GLAPT+S    L +GDALA+ALL++R 
Sbjct: 130 TGRPESSMARAADVHLCVKVAKEACPLGLAPTSSTTATLVMGDALAVALLKARG 183


>gi|218507376|ref|ZP_03505254.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli Brasil 5]
          Length = 182

 Score =  203 bits (516), Expect = 4e-50,   Method: Composition-based stats.
 Identities = 106/182 (58%), Positives = 139/182 (76%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + R+   L++N  ++ A R+I  EKRGL +LE +L   L+  F  A+E I  I GRV++T
Sbjct: 1   MNRRAIKLVENGVLESAKRTIEIEKRGLEALEQALDNGLAGPFTRAIEVIGDISGRVIVT 60

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG+KLA+T ASTGTP+FFVHAAEA+HGDLGMI RDD+++ +S  G S ELK+I
Sbjct: 61  GVGKSGHIGAKLAATFASTGTPAFFVHAAEANHGDLGMIARDDVVLAISKGGESAELKSI 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           + + RRFSIPLIA+T    S +A  ADIVL +P E E+CP+GLAPTTS +MQLA+GDALA
Sbjct: 121 ISFTRRFSIPLIALTCGESSSLATAADIVLLVPNEQEACPNGLAPTTSTLMQLALGDALA 180

Query: 191 IA 192
           +A
Sbjct: 181 VA 182


>gi|296110305|ref|YP_003620686.1| putative isomerase [Leuconostoc kimchii IMSNU 11154]
 gi|295831836|gb|ADG39717.1| putative isomerase [Leuconostoc kimchii IMSNU 11154]
          Length = 245

 Score =  200 bits (510), Expect = 2e-49,   Method: Composition-based stats.
 Identities = 77/241 (31%), Positives = 120/241 (49%), Gaps = 6/241 (2%)

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF---SIPLIAITSENKSVVACHAD 157
           A HGDLG ++ DD+ I +S SG + E+   L+  +     S+  IA+T  ++S +A   D
Sbjct: 5   AYHGDLGRVSVDDVAIFISNSGETQEVIQTLFALKNIHQDSLKTIALTGSDESTLAKSTD 64

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           +VL +    E+ P  LAPT+S    L +GDAL IA+ ++  F   DF + HPGG +G + 
Sbjct: 65  LVLKIDVAEEADPTKLAPTSSTTATLVMGDALLIAIEKANEFKREDFALYHPGGSIGKML 124

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   +          VK   P+ D I  +S+   G   V      + GIIT+GDI + F 
Sbjct: 125 LRNVEHSMHTKIPY-VKTTTPINDVIYRISDFGVGMTLVKTPEDTVIGIITDGDIRKKFL 183

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +   +  D M +    I +      A + +  +NIS L+V DD  K +GI+   D+
Sbjct: 184 YINQVKGSTASDYMTEGFITINKKARNNAAWKKMAANNISNLVVEDDNDKVVGIITIHDV 243

Query: 336 L 336
           L
Sbjct: 244 L 244


>gi|41632|emb|CAA35745.1| unnamed protein product [Escherichia coli K-12]
          Length = 223

 Score =  200 bits (508), Expect = 4e-49,   Method: Composition-based stats.
 Identities = 90/196 (45%), Positives = 122/196 (62%), Gaps = 1/196 (0%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+VV++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 7   ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 66

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      SI L+A+T +  S +   A  VL 
Sbjct: 67  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSIALLAMTGKPTSPLGLAAKAVLD 126

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 127 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNKV 186

Query: 221 SDVMHSGDSIPLVKIG 236
             +M   D+IP V + 
Sbjct: 187 HHLMRRDDAIPQVAVN 202


>gi|23009269|ref|ZP_00050381.1| COG0794: Predicted sugar phosphate isomerase involved in capsule
           formation [Magnetospirillum magnetotacticum MS-1]
          Length = 183

 Score =  187 bits (475), Expect = 2e-45,   Method: Composition-based stats.
 Identities = 87/174 (50%), Positives = 118/174 (67%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           +     +   +  ALR+I  E+ GL+ L +++   L   F  AV +I A +GRV+ TG+G
Sbjct: 10  RDEGQARAPAIASALRTIETEREGLACLMAAIGNGLGEPFAQAVARIGAARGRVICTGMG 69

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           KSGH+  K+A+T+ASTGTP+ +VH AEASHGDLGMI  DD+++ LSWSG + EL  I+ Y
Sbjct: 70  KSGHVARKIAATMASTGTPALYVHPAEASHGDLGMIQPDDVVLALSWSGETTELADIIGY 129

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            RR+ + L+AITS   S +   AD  L LPK  E+CP+GLAPTTS  MQLA+GD
Sbjct: 130 TRRYRVGLVAITSNAASTLGREADTCLALPKAKEACPNGLAPTTSTAMQLALGD 183


>gi|239630568|ref|ZP_04673599.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|301067722|ref|YP_003789745.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           casei str. Zhang]
 gi|239526851|gb|EEQ65852.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           paracasei subsp. paracasei 8700:2]
 gi|300440129|gb|ADK19895.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           casei str. Zhang]
          Length = 201

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 79/198 (39%), Positives = 115/198 (58%), Gaps = 4/198 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M     +   + +  E   +S +E ++       +   ++ +  + G+VV  G+GKSGHI
Sbjct: 1   MTKKYTELIHKYMRREIHAMSEIEQNIDN----SYTEILQTLLDLHGKVVFMGVGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T ASTGTP+FFVHA E+ HGDLGMI+ +D++I++S SG + E+ A +   +  +
Sbjct: 57  GKKLAATFASTGTPAFFVHATESVHGDLGMISSNDVVILISNSGETKEILAPIRSLKIMN 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +  IA T  + S +A   D VL +P E E+    LAPT S+   L +GDA+A AL   RN
Sbjct: 117 VHTIAFTGNSNSSLAEACDQVLLIPVESEADDMNLAPTNSSTAVLMVGDAIACALSSIRN 176

Query: 199 FSENDFYVLHPGGKLGTL 216
           F   DF V HP G LG  
Sbjct: 177 FGPKDFAVFHPAGALGRK 194


>gi|167771928|ref|ZP_02443981.1| hypothetical protein ANACOL_03301 [Anaerotruncus colihominis DSM
           17241]
 gi|167665726|gb|EDS09856.1| hypothetical protein ANACOL_03301 [Anaerotruncus colihominis DSM
           17241]
          Length = 209

 Score =  187 bits (474), Expect = 3e-45,   Method: Composition-based stats.
 Identities = 80/204 (39%), Positives = 116/204 (56%), Gaps = 4/204 (1%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
            +L     +      I  E   L  ++S    ++   +  A   I   KGRV++TG+GK+
Sbjct: 2   EALTDEKIIDFCKEQIQKESDALLRVKS----QVDEAYAQACRAILDCKGRVIVTGLGKT 57

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHIG K+A+T+AS G P+FFVH+ E  HGD+GMIT+DDL+I++S SG S E+  +L   +
Sbjct: 58  GHIGKKIAATMASLGIPAFFVHSCETLHGDMGMITKDDLVIMISNSGKSSEILNMLAPLK 117

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                 I+IT +  S +A   DI +     PE    GLAPT S+   LAIGDALA  + +
Sbjct: 118 IIGAKTISITKDKHSPLAEATDIKILCDAGPEIDHMGLAPTASSTGALAIGDALATVVCK 177

Query: 196 SRNFSENDFYVLHPGGKLGTLFVC 219
            R F++ +F + HPGG LG   + 
Sbjct: 178 MRGFTKQNFALSHPGGALGQQLIK 201


>gi|330946000|gb|EGH47307.1| KpsF/GutQ [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 172

 Score =  186 bits (472), Expect = 5e-45,   Method: Composition-based stats.
 Identities = 62/172 (36%), Positives = 99/172 (57%), Gaps = 3/172 (1%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIP 231
           + P +S    L +GDALA+ALL++R F+  DF   HPGG LG   +    +VMHSG+S+P
Sbjct: 1   MPPASSTTAALVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGESLP 60

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V+ G  L DA+  ++ K  G  A+V+    L GI T+GD+ R   +  D+    +++VM
Sbjct: 61  SVQRGTLLRDALLEMTRKGLGMTAIVEADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVM 120

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             + K    + L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 121 TLHGKTAHAEMLAAEALKIMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 172


>gi|110642980|ref|YP_670710.1| posphosugar isomerase [Escherichia coli 536]
 gi|110344572|gb|ABG70809.1| hypothetical posphosugar isomerase [Escherichia coli 536]
          Length = 198

 Score =  185 bits (470), Expect = 8e-45,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L ++E  +   LS  F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFF
Sbjct: 16  NELKAVEEVIDSPLSE-FANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFF 74

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A  
Sbjct: 75  VHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTCSHHSSLAIS 134

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 135 CDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|191171224|ref|ZP_03032774.1| sugar isomerase, KpsF/GutQ family [Escherichia coli F11]
 gi|300995852|ref|ZP_07181284.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|190908524|gb|EDV68113.1| sugar isomerase, KpsF/GutQ family [Escherichia coli F11]
 gi|300304707|gb|EFJ59227.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 200-1]
 gi|324011674|gb|EGB80893.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 60-1]
          Length = 198

 Score =  184 bits (468), Expect = 2e-44,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L ++E  +   LS  F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFF
Sbjct: 16  NELKAVEEVIDSPLSE-FANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFF 74

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A  
Sbjct: 75  VHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAIS 134

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 135 CDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|26249241|ref|NP_755281.1| phosphosugar isomerase [Escherichia coli CFT073]
 gi|227888376|ref|ZP_04006181.1| phosphosugar isomerase [Escherichia coli 83972]
 gi|300980543|ref|ZP_07175069.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|301049395|ref|ZP_07196359.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|26109648|gb|AAN81851.1|AE016765_253 Phosphosugar isomerase [Escherichia coli CFT073]
 gi|222034527|emb|CAP77269.1| Phosphosugar isomerase [Escherichia coli LF82]
 gi|227834645|gb|EEJ45111.1| phosphosugar isomerase [Escherichia coli 83972]
 gi|300298837|gb|EFJ55222.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 185-1]
 gi|300409243|gb|EFJ92781.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 45-1]
 gi|307554806|gb|ADN47581.1| sugar isomerase [Escherichia coli ABU 83972]
 gi|312947364|gb|ADR28191.1| putative phosphosugar isomerase [Escherichia coli O83:H1 str. NRG
           857C]
 gi|315293816|gb|EFU53168.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 153-1]
          Length = 198

 Score =  183 bits (465), Expect = 3e-44,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L ++E  +   LS  F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFF
Sbjct: 16  NELKAVEEVIDSPLSE-FANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFF 74

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A  
Sbjct: 75  VHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAIS 134

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 135 CDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|126700646|ref|YP_001089543.1| putative phosphosugar isomerase [Clostridium difficile 630]
 gi|254976575|ref|ZP_05273047.1| putative phosphosugar isomerase [Clostridium difficile QCD-66c26]
 gi|255093959|ref|ZP_05323437.1| putative phosphosugar isomerase [Clostridium difficile CIP 107932]
 gi|255102139|ref|ZP_05331116.1| putative phosphosugar isomerase [Clostridium difficile QCD-63q42]
 gi|255315711|ref|ZP_05357294.1| putative phosphosugar isomerase [Clostridium difficile QCD-76w55]
 gi|255518372|ref|ZP_05386048.1| putative phosphosugar isomerase [Clostridium difficile QCD-97b34]
 gi|255651490|ref|ZP_05398392.1| putative phosphosugar isomerase [Clostridium difficile QCD-37x79]
 gi|260684547|ref|YP_003215832.1| putative phosphosugar isomerase [Clostridium difficile CD196]
 gi|260688205|ref|YP_003219339.1| putative phosphosugar isomerase [Clostridium difficile R20291]
 gi|306521312|ref|ZP_07407659.1| putative phosphosugar isomerase [Clostridium difficile QCD-32g58]
 gi|115252083|emb|CAJ69921.1| putative phosphosugar isomerase [Clostridium difficile]
 gi|260210710|emb|CBA65534.1| putative phosphosugar isomerase [Clostridium difficile CD196]
 gi|260214222|emb|CBE06497.1| putative phosphosugar isomerase [Clostridium difficile R20291]
          Length = 199

 Score =  183 bits (464), Expect = 4e-44,   Method: Composition-based stats.
 Identities = 83/199 (41%), Positives = 115/199 (57%), Gaps = 4/199 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++  +  +  E   +  L      E   ++   V +I   +G+V+  G+GKS HIG KLA
Sbjct: 4   LKTMVDVMTTEMNAIRCLID----EAGIEYESIVSEIANCEGKVIFMGVGKSAHIGKKLA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVHA EA HGDLGMI   D+ I++S SG+S E+   + Y +      IA
Sbjct: 60  ATFASTGTPSFFVHATEAVHGDLGMIESKDITILISNSGNSMEVVNCIKYIKAIGSKTIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            TS   SV+A   D  L  P + E+    LAPTTS+ + L +GD++A AL +S NF  +D
Sbjct: 120 FTSNRNSVLAKECDYALIYPAKDEADHLNLAPTTSSTITLVLGDSIACALSKSSNFGSSD 179

Query: 204 FYVLHPGGKLGTLFVCASD 222
           FY  HPGG LG     A++
Sbjct: 180 FYKYHPGGSLGEKLKTANN 198


>gi|91212207|ref|YP_542193.1| phosphosugar isomerase [Escherichia coli UTI89]
 gi|117625066|ref|YP_854054.1| phosphosugar isomerase [Escherichia coli APEC O1]
 gi|218559825|ref|YP_002392738.1| phosphosugar isomerase [Escherichia coli S88]
 gi|237706527|ref|ZP_04537008.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|91073781|gb|ABE08662.1| phosphosugar isomerase [Escherichia coli UTI89]
 gi|115514190|gb|ABJ02265.1| phosphosugar isomerase [Escherichia coli APEC O1]
 gi|218366594|emb|CAR04348.1| putative phosphosugar isomerase [Escherichia coli S88]
 gi|226899567|gb|EEH85826.1| phosphosugar isomerase [Escherichia sp. 3_2_53FAA]
 gi|294492890|gb|ADE91646.1| phosphosugar isomerase [Escherichia coli IHE3034]
 gi|307625593|gb|ADN69897.1| putative phosphosugar isomerase [Escherichia coli UM146]
 gi|315289355|gb|EFU48750.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 110-3]
 gi|323951729|gb|EGB47604.1| SIS domain-containing protein [Escherichia coli H252]
 gi|323957251|gb|EGB52974.1| SIS domain-containing protein [Escherichia coli H263]
          Length = 198

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 76/179 (42%), Positives = 115/179 (64%), Gaps = 1/179 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L ++E  +   LS  F   ++ +++ +G+VV  G+GKSG I  KLA+T ASTGTPSFF
Sbjct: 16  NELKAVEEVIYSPLSE-FANLIKVLQSCQGKVVFIGVGKSGIIARKLAATFASTGTPSFF 74

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++    LI+ T  + S +A  
Sbjct: 75  VHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKMGNYLISFTRSHHSSLAIS 134

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 135 CDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELKKFTRADFGLYHPGGALG 193


>gi|255308008|ref|ZP_05352179.1| putative phosphosugar isomerase [Clostridium difficile ATCC 43255]
          Length = 199

 Score =  183 bits (464), Expect = 5e-44,   Method: Composition-based stats.
 Identities = 83/199 (41%), Positives = 116/199 (58%), Gaps = 4/199 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++  +  +  E   +  L      E   ++   V +I   +G+V+  G+GKS HIG KLA
Sbjct: 4   LKTMVDVMTTEMNAIRCLID----EAGIEYESIVSEIANCEGKVIFMGVGKSAHIGKKLA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +T ASTGTPSFFVHA EA HGDLGMI   D+ I++S SG+S E+   + Y +      IA
Sbjct: 60  ATFASTGTPSFFVHATEAVHGDLGMIESKDITILISNSGNSMEVVNCIKYIKAIGSKTIA 119

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            TS   SV+A   D  L  P++ E+    LAPTTS+ + L +GD++A AL +S NF  +D
Sbjct: 120 FTSNRNSVLAKECDYALIYPEKDEADHLNLAPTTSSTITLVLGDSIACALSKSSNFGSSD 179

Query: 204 FYVLHPGGKLGTLFVCASD 222
           FY  HPGG LG     A++
Sbjct: 180 FYKYHPGGSLGEKLKTANN 198


>gi|199598641|ref|ZP_03212056.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           rhamnosus HN001]
 gi|199590448|gb|EDY98539.1| polysialic acid capsule expression protein kpsF [Lactobacillus
           rhamnosus HN001]
          Length = 203

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 80/198 (40%), Positives = 117/198 (59%), Gaps = 3/198 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + +      +  E   +  +ES +      Q+   ++KI  + GR+V  G+GK+GHI
Sbjct: 1   MKENKLDLVHTYMQREIAAMQLIESQIN---DVQYCSVIDKIMHLTGRLVFMGVGKTGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T AS GTP+ FVHA EA HGD+GMIT +DL+I++S SG + E  A L   +R  
Sbjct: 58  GVKLAATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              +A T ++ S +A   + VLT+P   E+   GLAPT+S+   L +GDALA  +   + 
Sbjct: 118 AATVAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTISRLKG 177

Query: 199 FSENDFYVLHPGGKLGTL 216
           F+ +DF + HPGG LG  
Sbjct: 178 FTASDFALYHPGGALGQK 195


>gi|301027514|ref|ZP_07190851.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
 gi|300395022|gb|EFJ78560.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 69-1]
          Length = 198

 Score =  181 bits (459), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +  +  +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNSELIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   +R 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKRM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|169335089|ref|ZP_02862282.1| hypothetical protein ANASTE_01496 [Anaerofustis stercorihominis DSM
           17244]
 gi|169257827|gb|EDS71793.1| hypothetical protein ANASTE_01496 [Anaerofustis stercorihominis DSM
           17244]
          Length = 203

 Score =  180 bits (458), Expect = 2e-43,   Method: Composition-based stats.
 Identities = 73/200 (36%), Positives = 104/200 (52%), Gaps = 5/200 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + KN  +Q   + I  E+  L  L  SL       F  AV+ I   KG++++TG GKSG 
Sbjct: 1   MEKNEILQKGKKVIEMERYELGRLMDSL----DDNFVKAVDMITECKGKIILTGTGKSGL 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI-LYYARR 136
           I  K+A+TL  TG P+FF+ A    +GD+G I  +DLII +S SG +  LK + +  A+ 
Sbjct: 57  ISRKIAATLCCTGKPAFFLSAYNCENGDIGAIQPNDLIIAISNSGETTILKELVIPSAKT 116

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                I +T   +S +A   D+ L +  E E+CP G+  TTS    LA+GDALA+   E 
Sbjct: 117 IGAKAICLTGNTESTLAKLCDVALYIGVEKEACPTGVNATTSTTNTLAMGDALAMVSEEI 176

Query: 197 RNFSENDFYVLHPGGKLGTL 216
           R  +       H GG  G  
Sbjct: 177 RGVTREQVLFYHQGGAWGEK 196


>gi|284033393|ref|YP_003383324.1| Arabinose-5-phosphate isomerase [Kribbella flavida DSM 17836]
 gi|283812686|gb|ADB34525.1| Arabinose-5-phosphate isomerase [Kribbella flavida DSM 17836]
          Length = 278

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 78/193 (40%), Positives = 107/193 (55%), Gaps = 4/193 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +  A  +I  E   +S+L   L G     F   +  +   +G +V+TG+GKSG +G K+A
Sbjct: 81  LAAARSAIETEAAAVSALADRLDG----VFLDVLTAVAGCQGHLVVTGLGKSGLVGRKIA 136

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +TLASTGTP+ F+HA +A HGD G +T  DL++ LS SG + E+ A        SIP+IA
Sbjct: 137 ATLASTGTPATFIHAGDALHGDSGAVTSRDLVLALSASGETAEVCAFARMLAERSIPVIA 196

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  A   L      E+ P  LAPT S    L +GDALA AL+  R F+ +D
Sbjct: 197 MTGAEHSTLAQLATYTLDTMVLREADPLNLAPTASTTAALVMGDALACALVVLREFTHHD 256

Query: 204 FYVLHPGGKLGTL 216
           F   HP G LG  
Sbjct: 257 FARFHPSGTLGAR 269


>gi|260856925|ref|YP_003230816.1| putative isomerase [Escherichia coli O26:H11 str. 11368]
 gi|257755574|dbj|BAI27076.1| predicted isomerase [Escherichia coli O26:H11 str. 11368]
 gi|323154862|gb|EFZ41055.1| SIS domain protein [Escherichia coli EPECa14]
 gi|323183357|gb|EFZ68754.1| SIS domain protein [Escherichia coli 1357]
          Length = 198

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 74/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +    R +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNTDLIHLIKRFMRNEHKAVEEVIDS----PLSEVANLIKILQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|300936264|ref|ZP_07151197.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
 gi|300458589|gb|EFK22082.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 21-1]
          Length = 198

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNSTDLIHLIKHFMRNEYKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|237798603|ref|ZP_04587064.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. oryzae str.
           1_6]
 gi|331021456|gb|EGI01513.1| sugar isomerase, KpsF/GutQ [Pseudomonas syringae pv. oryzae str.
           1_6]
          Length = 164

 Score =  180 bits (457), Expect = 3e-43,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 96/164 (58%), Gaps = 3/164 (1%)

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPL 239
             L +GDALA+ALL++R F+  DF   HPGG LG   +    +VMHSGD++P V+ G  L
Sbjct: 1   AALVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGDALPSVQRGTLL 60

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVIL 297
            DA+  ++ K  G  A+++    L GI T+GD+ R   +  D+   +++DVM  + K + 
Sbjct: 61  RDALLEMTRKGLGMTAILEADGTLAGIFTDGDLRRTLDRPVDIRQTTIDDVMTVHGKTVH 120

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + L   A++++  H I  L+VVD   + +G  +  DLLR G++
Sbjct: 121 AEMLAAEALKIMEDHKIGALVVVDRNDRPVGAFNLQDLLRAGVM 164


>gi|330950267|gb|EGH50527.1| KpsF/GutQ [Pseudomonas syringae Cit 7]
          Length = 166

 Score =  179 bits (455), Expect = 4e-43,   Method: Composition-based stats.
 Identities = 60/164 (36%), Positives = 95/164 (57%), Gaps = 3/164 (1%)

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPL 239
             L +GDALA+ALL++R F+  DF   HPGG LG   +    +VMHSG+S+P V+ G  L
Sbjct: 3   AALVMGDALAVALLDARGFTAEDFAFSHPGGALGRRLLLKVENVMHSGESLPSVQRGTLL 62

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVIL 297
            DA+  ++ K  G  A+V+    L GI T+GD+ R   +  D+    +++VM  + K   
Sbjct: 63  RDALLEMTRKGLGMTAIVEADGTLAGIFTDGDLRRTLDRPVDIRQTIIDEVMTLHGKTAH 122

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 123 AEMLAAEALKIMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 166


>gi|331684455|ref|ZP_08385047.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           H299]
 gi|323978574|gb|EGB73656.1| SIS domain-containing protein [Escherichia coli TW10509]
 gi|331078070|gb|EGI49276.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           H299]
          Length = 198

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNSTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETTEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  ++S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHRSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|215488132|ref|YP_002330563.1| phosphosugar isomerase [Escherichia coli O127:H6 str. E2348/69]
 gi|306812283|ref|ZP_07446481.1| phosphosugar isomerase [Escherichia coli NC101]
 gi|331648573|ref|ZP_08349661.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
 gi|215266204|emb|CAS10630.1| phosphosugar isomerase [Escherichia coli O127:H6 str. E2348/69]
 gi|281179838|dbj|BAI56168.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|305854321|gb|EFM54759.1| phosphosugar isomerase [Escherichia coli NC101]
 gi|315295767|gb|EFU55084.1| sugar isomerase, KpsF/GutQ family [Escherichia coli MS 16-3]
 gi|330908866|gb|EGH37380.1| arabinose 5-phosphate isomerase [Escherichia coli AA86]
 gi|331042320|gb|EGI14462.1| polysialic acid capsule expression protein KpsF [Escherichia coli
           M605]
          Length = 198

 Score =  179 bits (455), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|170680141|ref|YP_001744980.1| KpsF/GutQ family sugar isomerase [Escherichia coli SMS-3-5]
 gi|170517859|gb|ACB16037.1| sugar isomerase, KpsF/GutQ family [Escherichia coli SMS-3-5]
          Length = 198

 Score =  179 bits (454), Expect = 5e-43,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNSTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|218690939|ref|YP_002399151.1| putative phosphosugar isomerase [Escherichia coli ED1a]
 gi|218428503|emb|CAR09429.2| putative phosphosugar isomerase [Escherichia coli ED1a]
          Length = 198

 Score =  179 bits (454), Expect = 6e-43,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKILQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|229553513|ref|ZP_04442238.1| phosphosugar isomerase [Lactobacillus rhamnosus LMS2-1]
 gi|229313138|gb|EEN79111.1| phosphosugar isomerase [Lactobacillus rhamnosus LMS2-1]
          Length = 203

 Score =  178 bits (453), Expect = 8e-43,   Method: Composition-based stats.
 Identities = 79/198 (39%), Positives = 117/198 (59%), Gaps = 3/198 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + +      +  E   +  +ES +      Q+   ++KI  + GR+V  G+GK+GHI
Sbjct: 1   MKENKLDLVHTYMQREIAAMQLIESQIN---DVQYCSVIDKIMHLTGRLVFMGVGKTGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T AS GTP+ FVHA EA HG++GMIT +DL+I++S SG + E  A L   +R  
Sbjct: 58  GVKLAATFASLGTPAIFVHATEAMHGNMGMITSEDLVILISNSGETKETLAPLPSLKRIG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              +A T ++ S +A   + VLT+P   E+   GLAPT+S+   L +GDALA  +   + 
Sbjct: 118 AATVAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTISRLKG 177

Query: 199 FSENDFYVLHPGGKLGTL 216
           F+ +DF + HPGG LG  
Sbjct: 178 FTASDFALYHPGGALGQK 195


>gi|330950266|gb|EGH50526.1| KpsF/GutQ [Pseudomonas syringae Cit 7]
          Length = 165

 Score =  178 bits (452), Expect = 1e-42,   Method: Composition-based stats.
 Identities = 81/166 (48%), Positives = 109/166 (65%), Gaps = 4/166 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +I++T + +S++A  ADI L      E+CP  LAPT+S    L +
Sbjct: 120 KMISLTGDPESILAKAADINLNAHVVHEACPLNLAPTSSTTAALVM 165


>gi|323966793|gb|EGB62224.1| SIS domain-containing protein [Escherichia coli M863]
 gi|327251556|gb|EGE63242.1| SIS domain protein [Escherichia coli STEC_7v]
          Length = 198

 Score =  177 bits (450), Expect = 2e-42,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNSTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETTEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  ++S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHRSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTCADFGLYHPGGALG 193


>gi|258538655|ref|YP_003173154.1| phosphosugar isomerase [Lactobacillus rhamnosus Lc 705]
 gi|257150331|emb|CAR89303.1| Phosphosugar isomerase [Lactobacillus rhamnosus Lc 705]
          Length = 203

 Score =  177 bits (448), Expect = 3e-42,   Method: Composition-based stats.
 Identities = 79/198 (39%), Positives = 116/198 (58%), Gaps = 3/198 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + +      +  E   +  +ES +      Q+   ++KI  + GR+V  G+GK+GHI
Sbjct: 1   MKENKLDLVHTYMQREIAAMQLIESQIN---DVQYCSVIDKIMHLTGRLVFMGVGKTGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T AS GTP+ FVHA EA HGD+GMIT +DL+I++S SG + E  A L   +R  
Sbjct: 58  GVKLAATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              +A T ++ S +A   + VLT+P   E+   GLAPT+S+   L +GDALA  +   + 
Sbjct: 118 AATVAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTISRLKG 177

Query: 199 FSENDFYVLHPGGKLGTL 216
           F+ +DF + H GG LG  
Sbjct: 178 FTASDFALYHLGGALGQK 195


>gi|313900882|ref|ZP_07834372.1| sugar isomerase, KpsF/GutQ family [Clostridium sp. HGF2]
 gi|312954302|gb|EFR35980.1| sugar isomerase, KpsF/GutQ family [Clostridium sp. HGF2]
          Length = 197

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 76/189 (40%), Positives = 111/189 (58%), Gaps = 4/189 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           + +I  EK  L +L +    E        +  I+  KG+VV  G+GKS HIG+KLA+T A
Sbjct: 6   IEAIEREKTALDALSAMSLQEC----ERVMAAIEECKGKVVFCGVGKSAHIGAKLAATFA 61

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           S G PSFFVHA E+ HGDLGMI   D++I++S SG++ E+  +L          +A  + 
Sbjct: 62  SLGIPSFFVHATESVHGDLGMIEEKDIVILISNSGTTQEVIQVLTPLHSIGCMTVACCAN 121

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S++A   D+ L  PK  E+  + LAPT+S  + L +GDA+A A+ + R F+ +DF+  
Sbjct: 122 RDSILAKACDLTLIYPKVTEADAYNLAPTSSTTLVLVLGDAIACAISKKRGFNPSDFHKF 181

Query: 208 HPGGKLGTL 216
           HPGG LG  
Sbjct: 182 HPGGSLGKR 190


>gi|330937993|gb|EGH41774.1| KpsF/GutQ [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 159

 Score =  176 bits (447), Expect = 4e-42,   Method: Composition-based stats.
 Identities = 80/160 (50%), Positives = 108/160 (67%), Gaps = 4/160 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4   SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +I++T +++S++A  ADI L      E+CP  LAPT+S 
Sbjct: 120 KMISLTGDSESILAKAADINLNAHVVHEACPLNLAPTSST 159


>gi|260869493|ref|YP_003235895.1| putative isomerase [Escherichia coli O111:H- str. 11128]
 gi|257765849|dbj|BAI37344.1| predicted isomerase [Escherichia coli O111:H- str. 11128]
 gi|323180248|gb|EFZ65800.1| SIS domain protein [Escherichia coli 1180]
          Length = 198

 Score =  175 bits (445), Expect = 7e-42,   Method: Composition-based stats.
 Identities = 73/197 (37%), Positives = 116/197 (58%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +    R +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNTDLIHLIKRFMRNEHKVVEEVIDS----PLSEVANLIKILQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+A+AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVALALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+   F + HPGG LG
Sbjct: 177 KFTRAYFGLYHPGGALG 193


>gi|237798604|ref|ZP_04587065.1| KpsF/GutQ [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331021457|gb|EGI01514.1| KpsF/GutQ [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 159

 Score =  174 bits (441), Expect = 2e-41,   Method: Composition-based stats.
 Identities = 78/160 (48%), Positives = 105/160 (65%), Gaps = 4/160 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +  +  A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGH+G
Sbjct: 4   SSDLIHSAQRTIRLEIEAMQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHVG 59

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +K+A+TLASTGT SFFVH AEASHGD+GMITRDD+I+ LS SGS++E+  +L   +R  I
Sbjct: 60  NKIAATLASTGTTSFFVHPAEASHGDMGMITRDDIILALSNSGSTNEIVTLLPLIKRLGI 119

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +I++T +  S++A  ADI L      E+CP  LAPT+S 
Sbjct: 120 KMISLTGDPDSILAKAADINLNAHVAHEACPLNLAPTSST 159


>gi|213580065|ref|ZP_03361891.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 182

 Score =  173 bits (438), Expect = 4e-41,   Method: Composition-based stats.
 Identities = 66/182 (36%), Positives = 97/182 (53%), Gaps = 2/182 (1%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG-TLFVCA 220
           +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG  L    
Sbjct: 1   MSVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGARLLNNV 60

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKD 279
             +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ R      
Sbjct: 61  HHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGG 120

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++  D  + G
Sbjct: 121 ALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAG 180

Query: 340 II 341
           II
Sbjct: 181 II 182


>gi|331658960|ref|ZP_08359902.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
 gi|331053542|gb|EGI25571.1| arabinose 5-phosphate isomerase [Escherichia coli TA206]
          Length = 155

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 71/150 (47%), Positives = 101/150 (67%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV  G+GKSG I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG +
Sbjct: 1   GKVVFIGVGKSGIIARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGET 60

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+ A L   ++    LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L 
Sbjct: 61  AEILATLPSLKKMGNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLV 120

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLG 214
           +GDA+A+AL E + F+  DF + HPGG LG
Sbjct: 121 VGDAVALALSELKKFTRADFGLYHPGGALG 150


>gi|213418455|ref|ZP_03351521.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E01-6750]
          Length = 151

 Score =  172 bits (436), Expect = 7e-41,   Method: Composition-based stats.
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 4/142 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q     +  E+ GL+ L+  +       F  A EK+    G+VV+ G+GKSGHIG K+A+
Sbjct: 14  QAGKEVLEIEREGLAELDQYINQ----HFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAA 69

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           T ASTGT SFFVH  EA+HGDLGM+T  D++I +S SG S E+ A++   +R  +PLI I
Sbjct: 70  TFASTGTSSFFVHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICI 129

Query: 145 TSENKSVVACHADIVLTLPKEP 166
           T   +S +A  AD+ L +    
Sbjct: 130 TGRPESSMARAADVHLCVKVPK 151


>gi|260889982|ref|ZP_05901245.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
 gi|260860588|gb|EEX75088.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
          Length = 195

 Score =  170 bits (431), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 70/193 (36%), Positives = 109/193 (56%), Gaps = 9/193 (4%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +  +A++ + +  E E+CP G AP +S    L  GDALA+ L++ ++F+ENDF   HPGG
Sbjct: 1   MGKYAELTINVGVEKEACPLGQAPMSSTTATLVTGDALAVCLMKLKDFTENDFAKYHPGG 60

Query: 212 KLG-TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGII 267
            LG  L +  SD+MH GD +P+VK    + + + +L++K+ G V + D   E  KL GII
Sbjct: 61  SLGKRLLLHVSDLMHIGDELPVVKEDEKIENVLMLLTKKKLGAVCISDTGLENGKLLGII 120

Query: 268 TEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN--ISVLMVVDDC 323
           TEGDI R     +        D+MI  P  I +D +   A+ L+      I+VL VV++ 
Sbjct: 121 TEGDIRRALEHKEKFFDYVASDIMISTPVTIEKDAMALDALHLMENRKSQINVLPVVENG 180

Query: 324 QKAIGIVHFLDLL 336
              +G++   DL+
Sbjct: 181 N-VVGLIRVHDLI 192


>gi|46906747|ref|YP_013136.1| SIS domain-containing protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|47093126|ref|ZP_00230902.1| SIS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|226223127|ref|YP_002757234.1| sugar-phosphate isomerase [Listeria monocytogenes Clip81459]
 gi|254824224|ref|ZP_05229225.1| SIS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|254853871|ref|ZP_05243219.1| SIS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|254933256|ref|ZP_05266615.1| SIS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|254992416|ref|ZP_05274606.1| sugar-phosphate isomerase [Listeria monocytogenes FSL J2-064]
 gi|255520977|ref|ZP_05388214.1| sugar-phosphate isomerase [Listeria monocytogenes FSL J1-175]
 gi|300765153|ref|ZP_07075139.1| hypothetical protein LMHG_11938 [Listeria monocytogenes FSL N1-017]
 gi|46880012|gb|AAT03313.1| SIS domain protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018499|gb|EAL09256.1| SIS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|225875589|emb|CAS04292.1| Putative sugar-phosphate isomerase [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258607256|gb|EEW19864.1| SIS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|293584816|gb|EFF96848.1| SIS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|293593457|gb|EFG01218.1| SIS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|300514124|gb|EFK41185.1| hypothetical protein LMHG_11938 [Listeria monocytogenes FSL N1-017]
 gi|328467571|gb|EGF38633.1| sugar-phosphate isomerase [Listeria monocytogenes 1816]
 gi|332310924|gb|EGJ24019.1| SIS domain protein [Listeria monocytogenes str. Scott A]
          Length = 200

 Score =  169 bits (428), Expect = 6e-40,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VEKI    G++V+ G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVEKIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|153840280|ref|ZP_01992947.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
 gi|149746059|gb|EDM57189.1| arabinose 5-phosphate isomerase [Vibrio parahaemolyticus AQ3810]
          Length = 159

 Score =  168 bits (427), Expect = 7e-40,   Method: Composition-based stats.
 Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 4/160 (2%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAI 243
           +GDALA+ALL++R FS  DF + HPGG LG   +   SD+MH G+++P V     + DA+
Sbjct: 1   MGDALAVALLQARGFSAEDFALSHPGGALGRKLLLKLSDIMHFGNALPKVSPDALIRDAL 60

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTL 301
             +SEK  G  A+VDE   + GI T+GD+ R   K  D++T ++ +VM KNP     + L
Sbjct: 61  LEISEKGLGMTAIVDEHDAMLGIFTDGDLRRTLDKRIDIHTTAIGEVMTKNPTTAHPEML 120

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               + L++  NI+ L++  +  K +G ++  DLL+ G++
Sbjct: 121 AVEGLNLMQNKNINALILCKED-KIVGALNMHDLLKAGVM 159


>gi|16802545|ref|NP_464030.1| hypothetical protein lmo0502 [Listeria monocytogenes EGD-e]
 gi|224500402|ref|ZP_03668751.1| hypothetical protein LmonF1_12339 [Listeria monocytogenes Finland
           1988]
 gi|224502197|ref|ZP_03670504.1| hypothetical protein LmonFR_06702 [Listeria monocytogenes FSL
           R2-561]
 gi|254829405|ref|ZP_05234092.1| SIS domain-containing protein [Listeria monocytogenes FSL N3-165]
 gi|254830513|ref|ZP_05235168.1| hypothetical protein Lmon1_04092 [Listeria monocytogenes 10403S]
 gi|16409878|emb|CAC98581.1| lmo0502 [Listeria monocytogenes EGD-e]
 gi|258601819|gb|EEW15144.1| SIS domain-containing protein [Listeria monocytogenes FSL N3-165]
          Length = 200

 Score =  168 bits (427), Expect = 9e-40,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VEKI    G++V+ G G SG 
Sbjct: 1   MDKQAILNNIHQTWQEEANAISRLPEVTSEE---ALVKTVEKIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|284800777|ref|YP_003412642.1| hypothetical protein LM5578_0525 [Listeria monocytogenes 08-5578]
 gi|284993963|ref|YP_003415731.1| hypothetical protein LM5923_0524 [Listeria monocytogenes 08-5923]
 gi|284056339|gb|ADB67280.1| hypothetical protein LM5578_0525 [Listeria monocytogenes 08-5578]
 gi|284059430|gb|ADB70369.1| hypothetical protein LM5923_0524 [Listeria monocytogenes 08-5923]
          Length = 200

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VEKI    G++V+ G G SG 
Sbjct: 1   MDKQAILNNIHQTWQEEANAISRLPEVTSEE---ALVKTVEKIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVYSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|290894373|ref|ZP_06557337.1| SIS domain-containing protein [Listeria monocytogenes FSL J2-071]
 gi|290556080|gb|EFD89630.1| SIS domain-containing protein [Listeria monocytogenes FSL J2-071]
          Length = 200

 Score =  168 bits (426), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V+ G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|312964913|ref|ZP_07779153.1| SIS domain protein [Escherichia coli 2362-75]
 gi|312290469|gb|EFR18349.1| SIS domain protein [Escherichia coli 2362-75]
          Length = 198

 Score =  168 bits (425), Expect = 1e-39,   Method: Composition-based stats.
 Identities = 71/197 (36%), Positives = 114/197 (57%), Gaps = 4/197 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +      +  E + +  +  S       +    ++ +++ +G+VV   +GKSG 
Sbjct: 1   MNNTDLIHLIKHFMRNEHKAVEEVIDS----PLSEVANLIKVLQSCQGKVVFIDVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI+ T  + S +A   D+ + +P + E+   GLAP+ S+ + L +GDA+ +AL E +
Sbjct: 117 GNYLISFTRSHHSSLAISCDLSVEIPVKSEADNLGLAPSCSSTVVLVVGDAVVLALSELK 176

Query: 198 NFSENDFYVLHPGGKLG 214
            F+  DF + HPGG LG
Sbjct: 177 KFTRADFGLYHPGGALG 193


>gi|47094728|ref|ZP_00232343.1| SIS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|254900272|ref|ZP_05260196.1| hypothetical protein LmonJ_10675 [Listeria monocytogenes J0161]
 gi|254911174|ref|ZP_05261186.1| SIS domain-containing protein [Listeria monocytogenes J2818]
 gi|254935502|ref|ZP_05267199.1| SIS domain-containing protein [Listeria monocytogenes F6900]
 gi|255025881|ref|ZP_05297867.1| hypothetical protein LmonocytFSL_05230 [Listeria monocytogenes FSL
           J2-003]
 gi|47016868|gb|EAL07786.1| SIS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|258608079|gb|EEW20687.1| SIS domain-containing protein [Listeria monocytogenes F6900]
 gi|293589101|gb|EFF97435.1| SIS domain-containing protein [Listeria monocytogenes J2818]
          Length = 200

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 95/199 (47%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V+ G G SG 
Sbjct: 1   MDKQAILNNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|222447135|pdb|3FXA|A Chain A, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447136|pdb|3FXA|B Chain B, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447137|pdb|3FXA|C Chain C, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
 gi|222447138|pdb|3FXA|D Chain D, Crystal Structure Of A Putative Sugar-Phosphate Isomerase
           (Lmof2365_0531) From Listeria Monocytogenes Str. 4b
           F2365 At 1.60 A Resolution
          Length = 201

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 55/198 (27%), Positives = 92/198 (46%), Gaps = 3/198 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            K + +    ++   E   +S L      E        VEKI    G++V+ G G SG  
Sbjct: 3   DKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVEKIAECTGKIVVAGCGTSGVA 59

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +   
Sbjct: 60  AKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKG 119

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             LI +T    SV+A  ADI   +    E  P     T S    +A  DA+ + L    N
Sbjct: 120 STLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNXLATASTXAVIASFDAVIVCLXTYXN 179

Query: 199 FSENDFYVLHPGGKLGTL 216
           +++  F V+HPGG +G  
Sbjct: 180 YTKEQFSVIHPGGAVGNK 197


>gi|313624969|gb|EFR94870.1| SIS domain-containing protein [Listeria innocua FSL J1-023]
          Length = 200

 Score =  167 bits (424), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V++G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVSGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T   +SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPESVIANEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|16799577|ref|NP_469845.1| hypothetical protein lin0502 [Listeria innocua Clip11262]
 gi|16412942|emb|CAC95734.1| lin0502 [Listeria innocua Clip11262]
 gi|313620420|gb|EFR91812.1| SIS domain-containing protein [Listeria innocua FSL S4-378]
          Length = 200

 Score =  167 bits (423), Expect = 2e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 97/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V+ G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T   +SV+A  ADI   +  + E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPESVIANEADIFFPVSVKKEPDPFNMLATASTMAVIASFDAIIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|213024486|ref|ZP_03338933.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 162

 Score =  167 bits (423), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 72/155 (46%), Positives = 102/155 (65%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S L   L   F  A   I   +G+V+++GIGKSGHIG K+A+TLASTGTP+FFVH AEA
Sbjct: 8   ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHIGKKIAATLASTGTPAFFVHPAEA 67

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   A  VL 
Sbjct: 68  LHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRAAKAVLD 127

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +  E E+CP  LAPT+S +  L +GDALA+A++++
Sbjct: 128 ISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQA 162


>gi|217965412|ref|YP_002351090.1| SIS domain protein [Listeria monocytogenes HCC23]
 gi|217334682|gb|ACK40476.1| SIS domain protein [Listeria monocytogenes HCC23]
 gi|307570032|emb|CAR83211.1| SIS domain protein [Listeria monocytogenes L99]
          Length = 200

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V+ G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI  T    SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGATENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTMAVIASFDAVIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|313634769|gb|EFS01207.1| SIS domain-containing protein [Listeria seeligeri FSL N1-067]
          Length = 200

 Score =  166 bits (422), Expect = 3e-39,   Method: Composition-based stats.
 Identities = 54/199 (27%), Positives = 96/199 (48%), Gaps = 3/199 (1%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + ++    +   E   +  L               VEKI    G++V++G G SG 
Sbjct: 1   MDKQAILENIHSTWREEAEAILRLPEVTNEN---ALIETVEKIANCTGKIVVSGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ +DD++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQQDDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              LI +T   +SV+A  ADI   +    E  P  +  T S +  +A  DA+ + L+   
Sbjct: 118 GSTLIGVTENPESVIAKEADIFFPVSVAKEPDPFNMLATASTMTVIASFDAIIVCLMTYM 177

Query: 198 NFSENDFYVLHPGGKLGTL 216
           N+++  F V+HPGG +G  
Sbjct: 178 NYTKEQFSVIHPGGAVGNK 196


>gi|225569913|ref|ZP_03778938.1| hypothetical protein CLOHYLEM_06008 [Clostridium hylemonae DSM
           15053]
 gi|225161383|gb|EEG74002.1| hypothetical protein CLOHYLEM_06008 [Clostridium hylemonae DSM
           15053]
          Length = 284

 Score =  165 bits (418), Expect = 9e-39,   Method: Composition-based stats.
 Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 3/208 (1%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G ++ +   +    R+I+ E   + +L   L  E +      VE I   KG+VV+ G G 
Sbjct: 66  GMAMDRKDIISEVKRTILEESEAIRALSGQLDMEKA---ARLVELIGDGKGKVVVAGCGT 122

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S     K+  +L      + F+  ++A HG LG++  +D++I++S  G+++EL  ++   
Sbjct: 123 SAMAARKVVHSLNCIECTAVFLTPSDAVHGGLGVLKENDILILISKGGNTEELVQLIPPC 182

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           R     L+ +T +  S +   AD+ L +    E C   +  T S +  L++ DA+ IAL+
Sbjct: 183 RSKGAVLVGVTEDEASKIGKAADLCLQVKAGREPCRFNMLATASTLAVLSVFDAVCIALM 242

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASD 222
           +   +++  F V+HP G +G   +   D
Sbjct: 243 QYTEYTKEQFAVIHPKGAVGERLLGKED 270


>gi|238501646|ref|XP_002382057.1| sugar isomerase, KpsF/GutQ [Aspergillus flavus NRRL3357]
 gi|317142753|ref|XP_001819071.2| sugar isomerase, KpsF/GutQ [Aspergillus oryzae RIB40]
 gi|220692294|gb|EED48641.1| sugar isomerase, KpsF/GutQ [Aspergillus flavus NRRL3357]
          Length = 447

 Score =  164 bits (416), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 23/241 (9%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---K 64
           S T+ GH+   +++V  A+  I  E+  L+ LE   +           AV +I       
Sbjct: 51  STTKDGHA---DASVSTAIHVISTERAALAHLERLYETNALAQESLARAVSQIARSVRSG 107

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG +
Sbjct: 108 GKLVCCGVGKSGKIAQKLEATMNSLGIYSAFLHPTEALHGDLGMIRPQDTLLLISFSGRT 167

Query: 125 DELKAILYYARRFSIPLIAITSENK-------SVVACHADIVLTLPKEPESC--PHGLAP 175
            EL  +L +    ++P+IAITS          S       I+L  P   +        AP
Sbjct: 168 PELLLLLPHI-PSTVPIIAITSHLHPSTCPLLSFQPSDMGILLPAPIHEDEELSIGVCAP 226

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE-----NDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           T+S  + L++GDALAIA     + S        F   HPGG +G      + +  S  S 
Sbjct: 227 TSSTTVALSLGDALAIATARRLHTSPGRGPAEIFKSFHPGGAIGAASNVLTPMSMSTASF 286

Query: 231 P 231
           P
Sbjct: 287 P 287


>gi|310831254|ref|YP_003969897.1| putative bifunctional KDO 8-phosphate phosphatase/arabinose
           5-phosphate isomerase [Cafeteria roenbergensis virus
           BV-PW1]
 gi|309386438|gb|ADO67298.1| putative bifunctional KDO 8-phosphate phosphatase/arabinose
           5-phosphate isomerase [Cafeteria roenbergensis virus
           BV-PW1]
          Length = 457

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 71/312 (22%), Positives = 130/312 (41%), Gaps = 15/312 (4%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             +    + II E R    L   L        +  V  IK     +   GIGKSG+I   
Sbjct: 155 DLILNYKQDIIQEIR--KELNYQLDNLNLNHINNLVNLIKNTDNNIYFMGIGKSGNIAKH 212

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            +  L S     +++++    HGD+G + ++ LI++ S SG++ E+  ++ + ++    +
Sbjct: 213 CSDLLKSISINCYYLNSINLLHGDIGTLNQN-LIVMFSKSGNTHEIIELIPFLKQRKCYV 271

Query: 142 IAITSENKSVVACHADIVLTLPKEPE-SCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           + I  ++ S+     D+V+  P   E        PT S +  L   + L   L E  N +
Sbjct: 272 VGICCDDNSLFEKDCDLVIKTPFTKEIDGAINKIPTNSIMSHLLFTNILVSKLKE--NIN 329

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             ++ + HP G +G   +   D +       ++     L      +++ + GC   V+  
Sbjct: 330 IEEYSLNHPSGNIGKNLLKIKDCLILDFPKIILDKNVLLHKVFLNMTKYKIGCCFFVNYD 389

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GI+T+GDI R    D N   +   D+  KN      +T +     +      + L 
Sbjct: 390 NKLLGILTDGDIRRLLLTDENKKFINKNDI-NKNYFF---ETNIDK--YVFEYKKYNYLP 443

Query: 319 VVDDCQKAIGIV 330
           ++    K IGI+
Sbjct: 444 II-KNDKLIGII 454


>gi|323484822|ref|ZP_08090178.1| hypothetical protein HMPREF9474_01929 [Clostridium symbiosum
           WAL-14163]
 gi|323401818|gb|EGA94160.1| hypothetical protein HMPREF9474_01929 [Clostridium symbiosum
           WAL-14163]
          Length = 202

 Score =  164 bits (415), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     AL +   E   ++ L  ++  E    +  AV  I   +GR++ TG G SG    
Sbjct: 5   DEIYDSALHTFANEANAVAKLADTVDRE---SYVKAVRMIAECEGRIITTGCGTSGACAK 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++         S F++ A+A HGD GMI R D+II++S SG + E+  ++  A+     
Sbjct: 62  KVSQVFNCVDRASQFLNPADAPHGDYGMIRRGDIIIIISKSGKTTEMINLIPVAKARGAR 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I +T    S +A  +D+ L L   PE+CP+    TTS     A+ DA++I  +      
Sbjct: 122 IITVTENPGSPIALESDLNLILSTGPEACPYQCLSTTSVTAVFALFDAISIGCMLYNGID 181

Query: 201 ENDFYVLHPGGKLGTL 216
           +N F ++HP G +G +
Sbjct: 182 KNYFKLVHPAGGVGAM 197


>gi|323693812|ref|ZP_08108004.1| hypothetical protein HMPREF9475_02867 [Clostridium symbiosum
           WAL-14673]
 gi|323502115|gb|EGB17985.1| hypothetical protein HMPREF9475_02867 [Clostridium symbiosum
           WAL-14673]
          Length = 202

 Score =  163 bits (414), Expect = 2e-38,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 98/196 (50%), Gaps = 3/196 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     AL +   E   ++ L  ++  E    +  AV  I   +GR++ TG G SG    
Sbjct: 5   DEIYDSALHTFANEANAVAKLADTVDRE---SYVKAVRMIAECEGRIITTGCGTSGACAK 61

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K++         S F++ A+A HGD GMI + D+II++S SG + E+  ++  A+     
Sbjct: 62  KVSQVFNCVDRASQFLNPADAPHGDYGMIRQGDIIIIISKSGKTTEMINLIPVAKARGAR 121

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I +T    S +A  +D+ L L   PE+CP+    TTS     A+ DA++I  +      
Sbjct: 122 IITVTENPGSPIALESDLNLILSTGPEACPYQCLSTTSVTAVFALFDAISIGCMLYNGID 181

Query: 201 ENDFYVLHPGGKLGTL 216
           +N F ++HP G +G +
Sbjct: 182 KNYFKLVHPAGGVGAM 197


>gi|83766929|dbj|BAE57069.1| unnamed protein product [Aspergillus oryzae]
          Length = 455

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 78/241 (32%), Positives = 115/241 (47%), Gaps = 23/241 (9%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---K 64
           S T+ GH+   +++V  A+  I  E+  L+ LE   +           AV +I       
Sbjct: 51  STTKDGHA---DASVSTAIHVISTERAALAHLERLYETNALAQESLARAVSQIARSVRSG 107

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG +
Sbjct: 108 GKLVCCGVGKSGKIAQKLEATMNSLGIYSAFLHPTEALHGDLGMIRPQDTLLLISFSGRT 167

Query: 125 DELKAILYYARRFSIPLIAITSENK-------SVVACHADIVLTLPKEPESC--PHGLAP 175
            EL  +L +    ++P+IAITS          S       I+L  P   +        AP
Sbjct: 168 PELLLLLPHI-PSTVPIIAITSHLHPSTCPLLSFQPSDMGILLPAPIHEDEELSIGVCAP 226

Query: 176 TTSAIMQLAIGDALAIALLESRNFSE-----NDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           T+S  + L++GDALAIA     + S        F   HPGG +G      + +  S  S 
Sbjct: 227 TSSTTVALSLGDALAIATARRLHTSPGRGPAEIFKSFHPGGAIGAASNVLTPMSMSTASF 286

Query: 231 P 231
           P
Sbjct: 287 P 287


>gi|326204739|ref|ZP_08194594.1| sugar isomerase (SIS) [Clostridium papyrosolvens DSM 2782]
 gi|325985110|gb|EGD45951.1| sugar isomerase (SIS) [Clostridium papyrosolvens DSM 2782]
          Length = 214

 Score =  163 bits (414), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 6/210 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLS--SLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIG 73
           M+  + Q  L +++ E   +S   + + ++      +  AVE I   +    RV ITGIG
Sbjct: 5   MRYDSEQS-LETMLKEFVNISMKEMHALIEDVNFDIYSEAVELILGAESNGNRVHITGIG 63

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K  H+   +AS L+STGTP++ +H  EA HG  G +   D++I +S SG + EL   +  
Sbjct: 64  KPAHVAGYIASLLSSTGTPAYELHGTEAVHGSSGQVKPGDVVIAISNSGETAELVGTVTT 123

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     +I++T + +S +A ++++ L      E      AP  S + ++ I   L+I L
Sbjct: 124 LKNNGAKIISVTGKKESWLAKNSEVFLYAGVSSEGDYLNRAPRASILAEIFILQGLSILL 183

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDV 223
              +N +   +   HPGG LG L      +
Sbjct: 184 QCKKNVTPEQYIKWHPGGALGKLRDDEKKI 213


>gi|115400459|ref|XP_001215818.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114191484|gb|EAU33184.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 450

 Score =  163 bits (413), Expect = 3e-38,   Method: Composition-based stats.
 Identities = 73/229 (31%), Positives = 109/229 (47%), Gaps = 20/229 (8%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KG 65
            T           V  A++ +  E+  L+ LE+  +           AV +I       G
Sbjct: 53  PTPSPVQDASGDAVTTAIQVLSTERAALAHLENLYETNPLAQENLARAVGQIAHSIRHGG 112

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S+SG + 
Sbjct: 113 KLVCCGVGKSGKIAQKLEATMNSLGVYSAFLHPTEALHGDLGMIRPHDTLLLISFSGRTP 172

Query: 126 ELKAILYYARRFSIPLIAITSENKSV-----VACHADIVLTLP---KEPESCPHGL-APT 176
           EL+ +L +    ++P+IAIT+          +    D+ + LP    E E    G+ APT
Sbjct: 173 ELQLLLPHI-PSTVPVIAITAHLHPSTCPLLLIPPPDMCILLPAPIHEDEESSFGVSAPT 231

Query: 177 TSAIMQLAIGDALAIALLESRNFSE-----NDFYVLHPGGKLGTLFVCA 220
           +S  + LA+GDALAIA     + S        F   HPGG +G      
Sbjct: 232 SSTTVALALGDALAIATARRLHTSPGRGPAEVFKSFHPGGAIGAAASSV 280


>gi|159124337|gb|EDP49455.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus A1163]
          Length = 426

 Score =  162 bits (410), Expect = 7e-38,   Method: Composition-based stats.
 Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 20/214 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +         AV +I       G++V+ G+GKS
Sbjct: 31  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSRIVRTVRNGGKLVVCGVGKS 90

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 91  GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHI- 149

Query: 136 RFSIPLIAITSE----NKSVVACHAD---IVLTLPKEPESCP--HGLAPTTSAIMQLAIG 186
             + P+IAITS        +++ H+    I+L  P   +        APT+S  + LA+G
Sbjct: 150 PSTTPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 209

Query: 187 DALAIALLESRNFSE-----NDFYVLHPGGKLGT 215
           DALAIA     + +        F   HPGG +G 
Sbjct: 210 DALAIATARRLHNTPGRGPAEVFKGFHPGGTIGA 243


>gi|224171427|ref|XP_002339493.1| predicted protein [Populus trichocarpa]
 gi|222875267|gb|EEF12398.1| predicted protein [Populus trichocarpa]
          Length = 219

 Score =  161 bits (409), Expect = 9e-38,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
              S   K   + + + +        +++  L+    +L    +  F    + +    G 
Sbjct: 9   DLPSPNAKSQQIDQTTLLNLFK----SQQNHLNYFFRNLDLSQTLTFT---QTLLHCNGT 61

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +  +G+GKSG + +K++ TL S G  + F+   +A HGD+G ++  D++++ S SG+++E
Sbjct: 62  IFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGNTEE 121

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L  ++  A+     L+++TS   + +    D+ + LP E E CP  LAP TS  +Q+  G
Sbjct: 122 LLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQMVFG 181

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D +AIAL+ +RN S+ ++   HP G++G  
Sbjct: 182 DTVAIALMGARNLSKEEYAANHPAGRIGKS 211


>gi|309775179|ref|ZP_07670191.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308917134|gb|EFP62862.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 204

 Score =  161 bits (408), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 95/201 (47%), Gaps = 6/201 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSK 81
           +     +  E   L +    +  E       A E I      + RV +TGIGK GH+   
Sbjct: 6   EQIREFLDIESSELKNFIDGIDTE---ALVAARELILNAEKNRNRVHVTGIGKPGHVAGY 62

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            AS L+STGTP++ +H  EA HG  G +   D++I +S SG + ELKA +   +     L
Sbjct: 63  AASLLSSTGTPTYELHGTEAVHGSAGQVLPGDVVIAISNSGETTELKATVETLKSNGARL 122

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           IA+T +  S +A   D+ L    + E  P    P  S + ++ +  +L+I L  ++N + 
Sbjct: 123 IALTGKADSWLAKQGDVTLIAGVKQEGDPMNKPPRASILAEMVMLQSLSILLQNAKNLTP 182

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
             +   HPGG LG     + D
Sbjct: 183 QQYVKWHPGGSLGASIKNSED 203


>gi|56797614|emb|CAI38888.1| kpsF [Campylobacter jejuni subsp. jejuni 81-176]
          Length = 173

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 57/169 (33%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
           E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG   +     +  
Sbjct: 1   EACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMV 60

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
             ++P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K     
Sbjct: 61  SSNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFDF 119

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +++M  NPKV+  D + + A +++ +H I   +VV    K +GI+  
Sbjct: 120 RAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-IVVSKEDKVVGIIQL 167


>gi|225575407|ref|ZP_03784017.1| hypothetical protein RUMHYD_03497 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037352|gb|EEG47598.1| hypothetical protein RUMHYD_03497 [Blautia hydrogenotrophica DSM
           10507]
          Length = 208

 Score =  160 bits (405), Expect = 3e-37,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 3/184 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPS 93
             S     ++     +   A + I+  K    R+ I+GIGK  HI   +AS ++STGTP+
Sbjct: 16  AESEFSEFVKNIRYEEVEQAADLIQKAKEAGNRLHISGIGKPAHIAGYIASLMSSTGTPA 75

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +F+H  EA HG  G +  +D++I +S SG + E++A +   +     +I ++    S +A
Sbjct: 76  YFLHGTEAVHGSCGQLKENDVVIFISNSGETAEMRATVQAIKNNGCKVIGVSGNPASWLA 135

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
             +D+ L      E      AP  S IM+  +  AL++ L    + +   +   HPGGKL
Sbjct: 136 KQSDVHLFAGVREEGGVLNRAPRMSIIMETMVLQALSVVLQSQEHVTPQQYVRWHPGGKL 195

Query: 214 GTLF 217
           G L 
Sbjct: 196 GELR 199


>gi|167771699|ref|ZP_02443752.1| hypothetical protein ANACOL_03071 [Anaerotruncus colihominis DSM
           17241]
 gi|167666339|gb|EDS10469.1| hypothetical protein ANACOL_03071 [Anaerotruncus colihominis DSM
           17241]
          Length = 217

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 6/208 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIG 73
            ++K   +Q A+ +  +  +     +  +      ++  A + I   +   GRV ITGIG
Sbjct: 13  PMLKQEAIQ-AMEAFTSLAKA--EFDHFVDNAADQEYIDAAQLILDAQAKGGRVHITGIG 69

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K GH+    AS ++STGTP++F+H  EA HG  G +   D++I +S SG + E+K  +  
Sbjct: 70  KPGHVSGYGASLMSSTGTPTYFLHGTEAVHGSCGQLAAGDVVICISNSGETAEMKTTVTA 129

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R    +I IT    S +A  +D  L      E  P   AP  S + +  +   L++ L
Sbjct: 130 IKRNGCKVIGITGNRTSWLARESDAHLFAGVRQEGGPLNRAPRASILAETFVLQRLSVLL 189

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCAS 221
             +R     ++   HPGG LG L     
Sbjct: 190 QVNRGLDPKEYVKWHPGGTLGQLRENEK 217


>gi|261205310|ref|XP_002627392.1| sugar isomerase [Ajellomyces dermatitidis SLH14081]
 gi|239592451|gb|EEQ75032.1| sugar isomerase [Ajellomyces dermatitidis SLH14081]
          Length = 458

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE     +      F  AV  +       G++VI+G+GKSG I  
Sbjct: 54  TAIHVISTERAALAHLEGIYATDKFAQDSFERAVTTVANTVRSGGKLVISGVGKSGKIAE 113

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G    F+H  EA HGDLGMI  DD ++++++SG + EL  +  +    ++P
Sbjct: 114 KVVATMNSLGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRTPELIRLQPHLPE-TVP 172

Query: 141 LIAITSEN----KSVVA---CHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+        ++A       I+L+ P  E E    G  AP TS  + L +GDALA+
Sbjct: 173 LIAITAHEHPDSCPLLAGSNSPDPILLSAPVHEHEDVSFGLPAPMTSTTVALTLGDALAL 232

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 233 ATSRKLYNSPGRGPAEVFKAFHPGGAIGA 261


>gi|239611393|gb|EEQ88380.1| sugar isomerase [Ajellomyces dermatitidis ER-3]
          Length = 458

 Score =  160 bits (404), Expect = 4e-37,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE     +      F  AV  +       G++VI+G+GKSG I  
Sbjct: 54  TAIHVISTERAALAHLEGIYATDKFAQDSFERAVTTVANTVRSGGKLVISGVGKSGKIAE 113

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G    F+H  EA HGDLGMI  DD ++++++SG + EL  +  +    ++P
Sbjct: 114 KVVATMNSLGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRTPELIRLQPHLPE-TVP 172

Query: 141 LIAITSEN----KSVVA---CHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+        ++A       I+L+ P  E E    G  AP TS  + L +GDALA+
Sbjct: 173 LIAITAHEHPDSCPLLAGSNSPDPILLSAPVHEHEDVSFGLPAPMTSTTVALTLGDALAL 232

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 233 ATSRKLYNSPGRGPAEVFKAFHPGGAIGA 261


>gi|270264519|ref|ZP_06192785.1| sugar isomerase (SIS) [Serratia odorifera 4Rx13]
 gi|270041655|gb|EFA14753.1| sugar isomerase (SIS) [Serratia odorifera 4Rx13]
          Length = 199

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 62/192 (32%), Positives = 101/192 (52%), Gaps = 3/192 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A  +     R L+ L   +    +  +   +  + A +G++V+TG+G SG    K+A 
Sbjct: 6   QRAAEAWAIYSRELAQLSQRID---APTWQRLLTLLAACRGKIVVTGVGTSGIAARKIAH 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            LA    P+ +++A +A+HGDLG +  DDL+I++S  G+SDEL  +L   +   +PLI +
Sbjct: 63  MLACVERPAIYLNATDAAHGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVPLIGV 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A +V+    E E  P  +  TTS ++ LAI D     L+E   +S+   
Sbjct: 123 TENPDSAIAHAAQLVIRTGVENEIDPLNMLATTSIVLVLAIFDVACACLMERSGYSKETL 182

Query: 205 YVLHPGGKLGTL 216
             +HPGG +G  
Sbjct: 183 LAVHPGGDVGKS 194


>gi|119470060|ref|XP_001258002.1| sugar isomerase, KpsF/GutQ [Neosartorya fischeri NRRL 181]
 gi|119406154|gb|EAW16105.1| sugar isomerase, KpsF/GutQ [Neosartorya fischeri NRRL 181]
          Length = 442

 Score =  159 bits (403), Expect = 5e-37,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 106/208 (50%), Gaps = 20/208 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +         AV +I       G++VI G+GKS
Sbjct: 48  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSQIVRTVRNGGKLVICGVGKS 107

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 108 GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHI- 166

Query: 136 RFSIPLIAITSE----NKSVVACHAD---IVLTLPKEPESCP--HGLAPTTSAIMQLAIG 186
             ++P+IAITS        +++ H+    I+L  P   +        APT+S  + LA+G
Sbjct: 167 PSTVPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 226

Query: 187 DALAIALLESRNFSE-----NDFYVLHP 209
           DALAIA     + +        F   HP
Sbjct: 227 DALAIATARRLHNTPGRGPAEVFKGFHP 254


>gi|327348597|gb|EGE77454.1| sugar isomerase [Ajellomyces dermatitidis ATCC 18188]
          Length = 439

 Score =  159 bits (402), Expect = 6e-37,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE     +      F  AV  +       G++VI+G+GKSG I  
Sbjct: 35  TAIHVISTERAALAHLEGIYATDKFAQDSFERAVTTVANTVRSGGKLVISGVGKSGKIAE 94

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G    F+H  EA HGDLGMI  DD ++++++SG + EL  +  +    ++P
Sbjct: 95  KVVATMNSLGVQCTFLHPTEALHGDLGMIRPDDAVLLITFSGRTPELIRLQPHLPE-TVP 153

Query: 141 LIAITSEN----KSVVA---CHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+        ++A       I+L+ P  E E    G  AP TS  + L +GDALA+
Sbjct: 154 LIAITAHEHPDSCPLLAGSNSPDPILLSAPVHEHEDVSFGLPAPMTSTTVALTLGDALAL 213

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 214 ATSRKLYNSPGRGPAEVFKAFHPGGAIGA 242


>gi|302337865|ref|YP_003803071.1| Arabinose-5-phosphate isomerase [Spirochaeta smaragdinae DSM 11293]
 gi|301635050|gb|ADK80477.1| Arabinose-5-phosphate isomerase [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score =  159 bits (402), Expect = 7e-37,   Method: Composition-based stats.
 Identities = 62/172 (36%), Positives = 89/172 (51%), Gaps = 3/172 (1%)

Query: 51  FQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
             +  AVE I A +    RV ITGIGK  H+   +AS L+STGTP++++H  EA HG  G
Sbjct: 32  DMYEDAVELILAAEKRGNRVHITGIGKPSHVAEYVASLLSSTGTPTYYLHGTEAVHGSCG 91

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +   D++I +S SG + ELKA +   +R    +IA+T    S +A   D  L      E
Sbjct: 92  QLLPGDVVICISNSGETVELKATVSAIKRNGCTVIAVTGNASSWLAQEGDAHLFAGVPEE 151

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
             P   AP  S + ++ I   L++ L   R  S  ++ + HPGG LG L   
Sbjct: 152 GGPLDRAPRISVLAEILILQGLSVILQSVRGVSPEEYVMWHPGGALGQLRSH 203


>gi|302337323|ref|YP_003802529.1| sugar isomerase (SIS) [Spirochaeta smaragdinae DSM 11293]
 gi|301634508|gb|ADK79935.1| sugar isomerase (SIS) [Spirochaeta smaragdinae DSM 11293]
          Length = 213

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 64/215 (29%), Positives = 101/215 (46%), Gaps = 5/215 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGK 74
           +M+  T + AL   +      + L    +   S  +  AV+ I   +    RV ITGIGK
Sbjct: 1   MMEAQTWREALHRFVDTAS--TELGRYKELVTSEIYDDAVDIILDAEKKGNRVHITGIGK 58

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
             H+   +AS  +STGTP++++H  EA HG  G +   D++I +S SG + ELKA +   
Sbjct: 59  PAHVAEYMASLFSSTGTPAYYLHGTEAVHGSCGQLVPGDVVICISNSGETAELKATVGAI 118

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           ++    +I++T   KS +A   D  L      E  P   AP  S ++++ I   L+I L 
Sbjct: 119 KKNGCKIISVTGNPKSWLAQEGDAHLFAGVGKEGGPLDRAPRVSVLVEIFILQGLSIILQ 178

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
             R  +   + + HPGG LG L       +     
Sbjct: 179 SIREVTPEQYIIWHPGGALGELRDHEKREVRRSVC 213


>gi|145244665|ref|XP_001394638.1| sugar isomerase, KpsF/GutQ [Aspergillus niger CBS 513.88]
 gi|134079328|emb|CAK96957.1| unnamed protein product [Aspergillus niger]
          Length = 443

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 74/230 (32%), Positives = 109/230 (47%), Gaps = 23/230 (10%)

Query: 8   FKSVTRKGHSLMKN---STVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKA 62
                     LM     + V  AL+ I AE+  L+ LE   Q +         AV +I  
Sbjct: 33  MTPPDPSEVPLMGTKDTAPVTSALQVIAAERAALAHLEHIYQTDPLAQDNLARAVAQIVR 92

Query: 63  I---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
                G++V  G+GKSG I  KL +T+ S G  S F+H  EA HGDLGMI   D ++++S
Sbjct: 93  TIKYGGKLVCCGVGKSGKIAQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLLIS 152

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSE----NKSVVACH---ADIVLTLPKEPESCP-- 170
           +SG + EL  +L +    ++ +IAITS        +++ H     I+L  P   +     
Sbjct: 153 FSGRTPELLLMLPHI-PSTVTVIAITSHMVSSTCPLLSFHPSNMGILLPAPIHEDEETSI 211

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSE-----NDFYVLHPGGKLGT 215
              APT+S  + L++GDALAIA     + +        F   HPGG +G 
Sbjct: 212 GVCAPTSSTTVALSLGDALAIATARRLHTAPGRGPAEIFKGFHPGGAIGA 261


>gi|269140703|ref|YP_003297404.1| sugar isomerase (SIS) [Edwardsiella tarda EIB202]
 gi|267986364|gb|ACY86193.1| sugar isomerase (SIS) [Edwardsiella tarda EIB202]
 gi|304560486|gb|ADM43150.1| Phosphosugar isomerase/binding protein [Edwardsiella tarda FL6-60]
          Length = 206

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 3/192 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L   L  E   Q+   ++++   +G+++++G+G SG    K+A  LA    P+ 
Sbjct: 16  SAELTQLAQRLDAE---QWQQLLDRLSGCRGKIMVSGVGTSGIAARKVAHMLACVERPAI 72

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +  DDL+I++S  G+S+EL  +L   +   +PLIA+T   +S +A 
Sbjct: 73  YLNATDAAHGDLGFLRGDDLVILISRGGNSEELTRLLPALQAKGVPLIAVTENPRSAIAR 132

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A + L    + E  P  +  TTS I+ LA+ DA    L++   +       +HPGG +G
Sbjct: 133 AAQLTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQRSGYDRQTLLSVHPGGDVG 192

Query: 215 TLFVCASDVMHS 226
                ++D   S
Sbjct: 193 LSLRRSTDDQAS 204


>gi|67522575|ref|XP_659348.1| hypothetical protein AN1744.2 [Aspergillus nidulans FGSC A4]
 gi|40744874|gb|EAA64030.1| hypothetical protein AN1744.2 [Aspergillus nidulans FGSC A4]
 gi|259487089|tpe|CBF85482.1| TPA: sugar isomerase, KpsF/GutQ (AFU_orthologue; AFUA_6G08860)
           [Aspergillus nidulans FGSC A4]
          Length = 482

 Score =  158 bits (400), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 68/213 (31%), Positives = 105/213 (49%), Gaps = 20/213 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKAI---KGRVVITGIGKSG 76
           ++V  A+  I  E+  L+ LE   Q +         AV++I       G++V  G+GKSG
Sbjct: 53  ASVTTAVHVISTERAALAHLERLYQTDQLAQEHLSRAVDQIAGTIRNGGKLVCCGVGKSG 112

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  KL +T+ S G  S F+H  EA HGDLGMI  +D ++++S+SG + EL  +L +   
Sbjct: 113 KIAQKLEATMNSLGIYSTFLHPTEALHGDLGMIRPNDTLLLISFSGRTPELLLLLPHIPP 172

Query: 137 FSIPLIAITSENK-------SVVACHADIVLTLPKEPESCP--HGLAPTTSAIMQLAIGD 187
            ++ ++A+TS          S       I+L  P   +        APT+S  + L++GD
Sbjct: 173 -TVTIVALTSHLHPSTCPLMSFQPMEKGILLPAPIHEDEETSIGVCAPTSSTTVALSLGD 231

Query: 188 ALAIALLESRNFSE-----NDFYVLHPGGKLGT 215
           ALAIA     + +        F   HPGG +G 
Sbjct: 232 ALAIATARKLHTTPGRGPAEVFKSFHPGGAIGA 264


>gi|303311661|ref|XP_003065842.1| SIS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240105504|gb|EER23697.1| SIS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|320039739|gb|EFW21673.1| sugar isomerase [Coccidioides posadasii str. Silveira]
          Length = 467

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 112/212 (52%), Gaps = 20/212 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIK---AIKGRVVITGIGKSG 76
           S +   +  I  E+  L++LE     +         AVE+I     + G++VI G+GKSG
Sbjct: 54  SALDTVVHVISTERAALANLERMYATDPFCRESMERAVEQIAKTINVGGKLVICGVGKSG 113

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG KL +T+ S G  S F+H  EA HGDLGMI ++D ++ +++SG + EL  +L +   
Sbjct: 114 KIGEKLVATMNSFGIQSCFLHPTEALHGDLGMIKQNDTLLFITFSGKTSELSMVLPHIPP 173

Query: 137 FSIPLIAITSEN-KSVVACHAD------IVLTLPK-EPESCPHG-LAPTTSAIMQLAIGD 187
             +P+IAIT+    S  A  +D      I+L  P  E E    G  APTTS  + LA+GD
Sbjct: 174 M-LPVIAITAHTQPSSCALLSDSDIRYTILLPAPVHEREEISFGLPAPTTSTTVALAVGD 232

Query: 188 ALAIALLESRNFSE-----NDFYVLHPGGKLG 214
           ALA+A+  S +          F   HPGG +G
Sbjct: 233 ALALAVARSLHTIPGRGPAEVFKGFHPGGAIG 264


>gi|56783481|emb|CAI38734.1| kpsF [Campylobacter jejuni]
          Length = 172

 Score =  158 bits (399), Expect = 1e-36,   Method: Composition-based stats.
 Identities = 54/168 (32%), Positives = 92/168 (54%), Gaps = 5/168 (2%)

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG 227
           +CP  LAP +S    L +GDALA AL+++RNF  +DF + HPGG LG   +     +   
Sbjct: 1   ACPLQLAPMSSTTATLVMGDALAAALMKARNFKPDDFALFHPGGSLGRKLLTKVKDLMVS 60

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLS 284
            ++P+V       D + +++  + G + VV E +KL GIIT+GD+ R      K      
Sbjct: 61  SNLPIVHPDTEFNDLVDVMTSGKLG-LCVVLENKKLVGIITDGDLRRALKASDKPRFDFK 119

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++M  NPKV+  D + + A +++ ++ I   ++V   +K +GI+  
Sbjct: 120 AKEIMSTNPKVVDADAMASEAEEIMLKYKIKE-IIVGKEEKVVGIIQL 166


>gi|229820196|ref|YP_002881722.1| Arabinose-5-phosphate isomerase [Beutenbergia cavernae DSM 12333]
 gi|229566109|gb|ACQ79960.1| Arabinose-5-phosphate isomerase [Beutenbergia cavernae DSM 12333]
          Length = 205

 Score =  158 bits (399), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 78/188 (41%), Positives = 110/188 (58%), Gaps = 4/188 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            S+  E R +        G  S     A   I+A  GR++++G+GKSGHI +K+A+T AS
Sbjct: 17  ESLRIESRAIEVAA----GRSSEALLAATRLIEARSGRLIVSGLGKSGHIAAKMAATFAS 72

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TGTP+ FVHA EA HGD GM+   D+ I++S SG++ E+       R   +P+IA+  + 
Sbjct: 73  TGTPAHFVHATEALHGDSGMVVPGDVAILISNSGTTAEVVQFGRMIRALGVPVIAMARDA 132

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  A + L +  E E+ P GLAPT S  + LA+GDALA AL+   NF +  F + H
Sbjct: 133 SSPLASLAQVWLDISVEREADPLGLAPTASTTLTLALGDALAAALMTRTNFDDAAFGLRH 192

Query: 209 PGGKLGTL 216
           PGG LG  
Sbjct: 193 PGGALGQQ 200


>gi|225683066|gb|EEH21350.1| polysialic acid capsule expression protein kpsF [Paracoccidioides
           brasiliensis Pb03]
          Length = 462

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 74/217 (34%), Positives = 110/217 (50%), Gaps = 20/217 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           +S++  AL  I  E+  L+ LE               AV  I       G++VITG+GKS
Sbjct: 53  SSSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVISGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H +EA HGDLGMI  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPSEALHGDLGMIKPNDTVLLVTFSGKTPELLRLQPYL- 171

Query: 136 RFSIPLIAITSEN----KSVVACHAD---IVLTLPK-EPESCPHG-LAPTTSAIMQLAIG 186
             ++ +IAIT+        ++AC ++   I+L  P  E E    G  AP TS  + LA+G
Sbjct: 172 PTTVSIIAITAHMQPDLCPLLACSSNANSILLASPVHEHEEISFGLPAPMTSTTVALAVG 231

Query: 187 DALAIALLESRNFSE-----NDFYVLHPGGKLGTLFV 218
           DALA+A     +          F   HPGG +G    
Sbjct: 232 DALALATARRLHTIPGRGPAEVFKGFHPGGAIGAASC 268


>gi|70991853|ref|XP_750775.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus Af293]
 gi|66848408|gb|EAL88737.1| sugar isomerase, KpsF/GutQ [Aspergillus fumigatus Af293]
          Length = 426

 Score =  157 bits (398), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 71/208 (34%), Positives = 105/208 (50%), Gaps = 20/208 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKS 75
            + V  A+  I  E+  L++LE   Q +         AV +I       G++V+ G+GKS
Sbjct: 31  TAAVTTAIHVISTERAALANLEQIYQTDRLAQENLARAVSRIVRTVRNGGKLVVCGVGKS 90

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG KL +T+ S G  S F+H  EA HGDLGMI   D ++V+S+SG + EL  +L +  
Sbjct: 91  GKIGQKLEATMNSMGIYSAFLHPTEALHGDLGMIRPHDTLLVISFSGRTPELLLLLPHI- 149

Query: 136 RFSIPLIAITSE----NKSVVACHAD---IVLTLPKEPESCP--HGLAPTTSAIMQLAIG 186
             + P+IAITS        +++ H+    I+L  P   +        APT+S  + LA+G
Sbjct: 150 PSTTPVIAITSHMHPDTCPILSFHSSDMGILLPAPIHEDEESSLGVRAPTSSTTVALALG 209

Query: 187 DALAIALLESRNFSE-----NDFYVLHP 209
           DALAIA     + +        F   HP
Sbjct: 210 DALAIATARRLHNTPGRGPAEVFKGFHP 237


>gi|257785080|ref|YP_003180297.1| sugar isomerase (SIS) [Atopobium parvulum DSM 20469]
 gi|257473587|gb|ACV51706.1| sugar isomerase (SIS) [Atopobium parvulum DSM 20469]
          Length = 202

 Score =  157 bits (397), Expect = 2e-36,   Method: Composition-based stats.
 Identities = 54/182 (29%), Positives = 83/182 (45%), Gaps = 3/182 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            SL   ++         A + I   +   GR+ +TGIGK GH+    AS  +STGTP++ 
Sbjct: 17  KSLHQYVENIDFEALSAAKKLILDAEAKGGRLHVTGIGKPGHVSGYAASLFSSTGTPTYE 76

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           +H  E  HG  G     D++I +S SG + ELKA +   +   + +IA+T    S +A  
Sbjct: 77  LHGTECVHGSAGQTRPGDVVIAISNSGETGELKATVTCLKNVGVHIIALTGNPNSWLANE 136

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           A++ L    E E       P  S + ++     L+I L      +   +   HPGG LG 
Sbjct: 137 AEVALIAGVEQEGDSMNKPPRASILAEIMELQCLSILLQNEYGLNPEQYVKWHPGGALGA 196

Query: 216 LF 217
             
Sbjct: 197 SI 198


>gi|238794634|ref|ZP_04638240.1| Phosphosugar isomerase/binding protein [Yersinia intermedia ATCC
           29909]
 gi|238726023|gb|EEQ17571.1| Phosphosugar isomerase/binding protein [Yersinia intermedia ATCC
           29909]
          Length = 187

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ ++  ++  Q    +E +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 4   SRELAALKDNVDPQVWLQ---VLEMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 60

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 61  YLNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVQIISVTENEQSAIAQ 120

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+   L+  R F++     +HPGG +G
Sbjct: 121 VSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARRGFTKQALLAVHPGGDVG 180


>gi|119193957|ref|XP_001247582.1| hypothetical protein CIMG_01353 [Coccidioides immitis RS]
          Length = 467

 Score =  157 bits (397), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 112/212 (52%), Gaps = 20/212 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIK---AIKGRVVITGIGKSG 76
           S +   +  I  E+  L++LE     +         AVE+I     + G++VI G+GKSG
Sbjct: 54  SALDTVVHVISTERAALANLERMYATDPFSRESMERAVEQIAKTINVGGKLVICGVGKSG 113

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG KL +T+ S G  S F+H  EA HGDLGMI ++D ++ +++SG + EL  +L +   
Sbjct: 114 KIGEKLVATMNSFGIQSCFLHPTEALHGDLGMIKQNDTLLFITFSGKTSELSMVLPHIPP 173

Query: 137 FSIPLIAITSE-NKSVVACHAD------IVLTLPK-EPESCPHG-LAPTTSAIMQLAIGD 187
             +P+IAIT+    S  A  +D      I+L  P  E E    G  APTTS  + LA+GD
Sbjct: 174 M-LPVIAITAHMQPSSCALLSDSDIRYTILLPAPVHEREEISFGLPAPTTSTTVALAVGD 232

Query: 188 ALAIALLESRNFSE-----NDFYVLHPGGKLG 214
           ALA+A+  S +          F   HPGG +G
Sbjct: 233 ALALAVARSLHTIPGRGPAEVFKEFHPGGAIG 264


>gi|313899731|ref|ZP_07833234.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312955346|gb|EFR37011.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 204

 Score =  156 bits (396), Expect = 3e-36,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 91/193 (47%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +     +  E   L +   S+  E        + + +    RV +TGIGK GH+    AS
Sbjct: 6   EQIREFLDIESSELKNFIDSIDAEALIAARELILQAEQNHNRVHVTGIGKPGHVAGYAAS 65

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L+STGTP++ +H  EA HG  G +   D++I +S SG + ELKA +   +     LIA+
Sbjct: 66  LLSSTGTPTYELHGTEAVHGSAGQVLSGDVVIAISNSGETTELKATVETLKSNGAKLIAL 125

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T +  S +A   D+ L      E       P  S + ++ +  +L+I L  ++N +   +
Sbjct: 126 TGKADSWLAKQGDVTLIAGVNQEGDAMNKPPRASILAEMVMLQSLSILLQNAKNLTPQQY 185

Query: 205 YVLHPGGKLGTLF 217
              HPGG LG   
Sbjct: 186 VKWHPGGSLGASI 198


>gi|157372930|ref|YP_001480919.1| sugar isomerase (SIS) [Serratia proteamaculans 568]
 gi|157324694|gb|ABV43791.1| sugar isomerase (SIS) [Serratia proteamaculans 568]
          Length = 199

 Score =  156 bits (396), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 3/192 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q A ++     R L+ L   +  +    +   +  + A +G++V+TG+G SG    K+A 
Sbjct: 6   QRATQAWAIYSRELAQLGQRIDPQ---TWQRLLTLLAACRGKIVVTGVGTSGIAARKIAH 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            LA    P+ +++A +A+HGDLG +  DDL+I++S  G+SDEL  +L   +   + +I +
Sbjct: 63  MLACVERPAIYLNATDAAHGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVIGV 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  A + +    E E  P  +  TTS ++ LAI DA    L+E   + +   
Sbjct: 123 TENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLVLAIFDAACACLMERSGYDKETL 182

Query: 205 YVLHPGGKLGTL 216
             +HPGG +G  
Sbjct: 183 LAVHPGGDVGKR 194


>gi|323485555|ref|ZP_08090901.1| hypothetical protein HMPREF9474_02652 [Clostridium symbiosum
           WAL-14163]
 gi|323694538|ref|ZP_08108705.1| hypothetical protein HMPREF9475_03569 [Clostridium symbiosum
           WAL-14673]
 gi|323401203|gb|EGA93555.1| hypothetical protein HMPREF9474_02652 [Clostridium symbiosum
           WAL-14163]
 gi|323501412|gb|EGB17307.1| hypothetical protein HMPREF9475_03569 [Clostridium symbiosum
           WAL-14673]
          Length = 196

 Score =  156 bits (395), Expect = 4e-36,   Method: Composition-based stats.
 Identities = 57/187 (30%), Positives = 97/187 (51%), Gaps = 3/187 (1%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +  E   +  L  SL      Q     E IK  +G+VV++  G S     K+A TL   
Sbjct: 8   VLNREAEAIRELVFSLDE---AQVDAVTETIKNCRGKVVLSACGTSAQAARKIAHTLCCV 64

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+FF+  ++A HG LG+I   D++++LS  G + E+  ++  ARR    +I +T   +
Sbjct: 65  GCPAFFIPPSDALHGGLGVIGEQDVLLLLSKGGYTKEINEMILPARRSGARVIMVTENEE 124

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
              A   D++L +  + E     +  T S +  +A+ DA++I+L+E + F++  FY +HP
Sbjct: 125 GEYAKSCDLILRIKVKEEPDRFNMLATASTLAVIAVFDAVSISLMEEKQFTKEHFYRIHP 184

Query: 210 GGKLGTL 216
           GG +G  
Sbjct: 185 GGGVGKR 191


>gi|315640464|ref|ZP_07895574.1| arabinose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
 gi|315483824|gb|EFU74310.1| arabinose 5-phosphate isomerase [Enterococcus italicus DSM 15952]
          Length = 203

 Score =  156 bits (394), Expect = 5e-36,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 99/201 (49%), Gaps = 9/201 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M    ++   + I  E   ++    S+  E   Q + A + I A K   GR+ ITGIGK 
Sbjct: 1   MNEQALKNYTQHIETE---VTQFLKSIDEE---QLNRARQLIGAAKEQHGRLHITGIGKP 54

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            H+   + +  +STGTP +F+   EA HG  G +  +D++I +S SG++ EL+  +   +
Sbjct: 55  SHVAEYMCALFSSTGTPCYFLDGTEAVHGSAGQVLPEDVVIAISNSGNTIELRNTVEALQ 114

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  + +I++T    S +A + + VL    + E       P  S + ++ +   L+I L E
Sbjct: 115 RMGVKIISVTGNLSSWLAKNTEAVLFAGVQNEGDDTNKPPRLSIVAEIIVLQCLSILLQE 174

Query: 196 SRNFSENDFYVLHPGGKLGTL 216
              F+   + + HPGG LG  
Sbjct: 175 DTAFTMEKYAMWHPGGALGAQ 195


>gi|288906301|ref|YP_003431523.1| carbohydrate isomerase, KpsF/GutQ family [Streptococcus
           gallolyticus UCN34]
 gi|325979315|ref|YP_004289031.1| arabinose-5-phosphate isomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288733027|emb|CBI14608.1| putative carbohydrate isomerase, KpsF/GutQ family [Streptococcus
           gallolyticus UCN34]
 gi|325179243|emb|CBZ49287.1| arabinose-5-phosphate isomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 199

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/201 (27%), Positives = 101/201 (50%), Gaps = 9/201 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M N  +   + ++  E      L   ++     + +   E I   K   GRV +TGIGK 
Sbjct: 1   MNNLQLDYFINTLDTE------LHDFIKSIDKEKINLVAELILDAKQNGGRVHVTGIGKP 54

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            H+   +++ L+STGTP++F+ A E+ HG  G + + D++I +S SG + EL+  +   +
Sbjct: 55  SHVSQYISALLSSTGTPAYFLDATESVHGSAGQVVKGDVVIAISNSGETLELQRTIEALK 114

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +  + ++++T    S +A ++D  L    E E       P  S I ++ I  A++I L E
Sbjct: 115 KLGVKIVSVTGGKSSWLAKNSDFALFAGVEEEGDSFNKPPRASIIAEILILQAVSIVLQE 174

Query: 196 SRNFSENDFYVLHPGGKLGTL 216
             + +   +++ HPGG LG  
Sbjct: 175 KSHLNMEQYHLWHPGGSLGKS 195


>gi|56797557|emb|CAI38901.1| kpsF [Campylobacter jejuni]
          Length = 173

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 56/169 (33%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
           E+CP  LAP +S    L +GDALA AL++ RNF  +DF + HPGG LG   +     +  
Sbjct: 1   EACPLQLAPMSSTTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMV 60

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
             ++P+V       D + +++  R G + VV E +KL GIIT+GD+ R      K     
Sbjct: 61  SSNLPIVHPDTEFNDLVDVMTSGRLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFDF 119

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +++M  NPKV+  D + + A +++ +H I   ++V   ++ +GI+  
Sbjct: 120 RAKEIMSTNPKVVDADAMASEAEEIMLKHKIKE-IIVGKEERVMGIIQL 167


>gi|294638198|ref|ZP_06716452.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
 gi|291088634|gb|EFE21195.1| arabinose 5-phosphate isomerase [Edwardsiella tarda ATCC 23685]
          Length = 205

 Score =  156 bits (394), Expect = 6e-36,   Method: Composition-based stats.
 Identities = 58/189 (30%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L + L    +  +   ++++   +G++V++G+G SG    K+A  LA    P+ 
Sbjct: 16  SEELAQLATRLD---AASWQRLLDRLDGCRGKIVVSGVGTSGIAARKVAHMLACVERPAI 72

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           ++ A +A+HGDLG +  +DL+I++S  G+SDEL  +L       +PLIA+T    S +A 
Sbjct: 73  YLSATDAAHGDLGFLRAEDLVILISRGGNSDELTRLLPTLLAKGVPLIAVTENPDSAIAQ 132

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A + L    + E  P  +  TTS I+ LA+ DA    L++   +       +HPGG +G
Sbjct: 133 AAQLTLATGVQREIDPLNMLATTSIILVLALFDAACACLMQRSGYDRRTLLAVHPGGDVG 192

Query: 215 TLFVCASDV 223
                A D 
Sbjct: 193 LSLRHAGDQ 201


>gi|50550191|ref|XP_502568.1| YALI0D08316p [Yarrowia lipolytica]
 gi|49648436|emb|CAG80756.1| YALI0D08316p [Yarrowia lipolytica]
          Length = 322

 Score =  155 bits (392), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 68/275 (24%), Positives = 117/275 (42%), Gaps = 23/275 (8%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQG--ELSFQFHCAVEKI 60
             F  F  +T    +   N+ +  A   + A+   ++ +        E+  QF   ++ +
Sbjct: 1   MMFDTFSPITPPSEAA-PNAVLASAQTVLRAQAATIAHITDLYDTDPEVQQQFAKGIQYL 59

Query: 61  KAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
                   +VV+TG+GKS  I  KL++T+ S G  +  +H  EA HGDLG++   D++++
Sbjct: 60  HNAVVGGNKVVLTGMGKSHKIACKLSATMNSLGMHATPLHPTEALHGDLGIVKPGDVVVM 119

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL---- 173
           ++ SG++ ELK +L +       L+ +T E  S +   +  V   P         +    
Sbjct: 120 ITASGNTPELKQLLPHL---DATLLTLTCEPNSSLGHLSHAVFACPVPDSHKEKNIYGMA 176

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND----FYVLHPGGKLGTLFVCASDVMHSGDS 229
           APTTS    L +GD++ IAL ES    + +    F   HPGG +G  F            
Sbjct: 177 APTTSTTACLVVGDSICIALCESLQLDKAERNRTFGRNHPGGVIGEAFKNE-----LPPV 231

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +        + + +L     G   VV +   L 
Sbjct: 232 QSVCSYSTSSHNEMLLL-RTTSGNQWVVVDNTWLV 265


>gi|238758374|ref|ZP_04619552.1| Phosphosugar isomerase/binding protein [Yersinia aldovae ATCC
           35236]
 gi|238703497|gb|EEP96036.1| Phosphosugar isomerase/binding protein [Yersinia aldovae ATCC
           35236]
          Length = 193

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ ++   +  Q    +  +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 10  SRELAALKDNVDQRVWLQ---VLGMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 67  YLNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 126

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+ + L+    FS+     +HPGG +G
Sbjct: 127 VSALVLKTHVQQEIDPLNMLATTSIVLVLALFDAICVCLMARSGFSKETLLAVHPGGDVG 186


>gi|295658628|ref|XP_002789874.1| sugar isomerase [Paracoccidioides brasiliensis Pb01]
 gi|226282835|gb|EEH38401.1| sugar isomerase [Paracoccidioides brasiliensis Pb01]
          Length = 461

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 20/217 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           ++++  AL  I  E+  L+ LE               AV  I       G++VITG+GKS
Sbjct: 53  STSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVSSGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H  EA HGDLGMI  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPTEALHGDLGMIKPNDTVLLVTFSGKTPELLRLQPYL- 171

Query: 136 RFSIPLIAITSE------NKSVVACHADIVLTLP--KEPESCPHG-LAPTTSAIMQLAIG 186
             ++ +IAIT+            + +A+ +L      E E    G  AP TS  + LA+G
Sbjct: 172 PTTVSIIAITAHMQPDLCPLLTCSSNANSILLASPVHEHEEISFGLPAPMTSTTVALAVG 231

Query: 187 DALAIALLESRNFSE-----NDFYVLHPGGKLGTLFV 218
           DALA+A     +          F   HPGG +G    
Sbjct: 232 DALALATARRLHTIPGRGPAEIFKGFHPGGTIGAASC 268


>gi|238755687|ref|ZP_04617021.1| Phosphosugar isomerase/binding protein [Yersinia ruckeri ATCC
           29473]
 gi|238706054|gb|EEP98437.1| Phosphosugar isomerase/binding protein [Yersinia ruckeri ATCC
           29473]
          Length = 193

 Score =  155 bits (391), Expect = 1e-35,   Method: Composition-based stats.
 Identities = 56/180 (31%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L+ L+ ++   +  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 10  SRELAVLKENVDQRVWLQ---VLDMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 67  YLNATDAAHGDLGFLGPQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 126

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+ + L+    FS+     +HPGG +G
Sbjct: 127 VSALVLKTHVQQEIDPLNMLATTSIVLVLALFDAICVCLMARGGFSKERLLAVHPGGDVG 186


>gi|238782949|ref|ZP_04626977.1| Phosphosugar isomerase/binding protein [Yersinia bercovieri ATCC
           43970]
 gi|238716152|gb|EEQ08136.1| Phosphosugar isomerase/binding protein [Yersinia bercovieri ATCC
           43970]
          Length = 187

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 104/180 (57%), Gaps = 3/180 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ S+  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 4   SRELAALKESVDQQVWLQ---VLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 60

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 61  YLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 120

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+ I L+    F++     +HPGG +G
Sbjct: 121 VSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICICLMARSGFTKESLLAVHPGGDVG 180


>gi|328477216|gb|EGF47413.1| phosphosugar isomerase [Lactobacillus rhamnosus MTCC 5462]
          Length = 175

 Score =  154 bits (390), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 71/175 (40%), Positives = 104/175 (59%), Gaps = 3/175 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK + +      +  E   +  +ES +      Q+   ++KI  + GR+V  G+GK+GHI
Sbjct: 1   MKENKLDLVHTYMQREIAAMQLIESQIN---DVQYCSVIDKIMHLTGRLVFMGVGKTGHI 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G KLA+T AS GTP+ FVHA EA HGD+GMIT +DL+I++S SG + E  A L   +R  
Sbjct: 58  GVKLAATFASLGTPAIFVHATEAMHGDMGMITSEDLVILISNSGETKETLAPLPSLKRIG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
              +A T ++ S +A   + VLT+P   E+   GLAPT+S+   L +GDALA  +
Sbjct: 118 AATVAFTGQDDSHLAQACESVLTIPVTHEADDLGLAPTSSSTAALMVGDALACTI 172


>gi|325571541|ref|ZP_08147041.1| KpsF/GutQ family carbohydrate isomerase [Enterococcus casseliflavus
           ATCC 12755]
 gi|325156017|gb|EGC68213.1| KpsF/GutQ family carbohydrate isomerase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 221

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/206 (27%), Positives = 95/206 (46%), Gaps = 15/206 (7%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQF------------HCAVEKIKAIKG---RVVITGIG 73
           +S++ EK  L    ++L+ +   QF              A E I   +    RV +TG+G
Sbjct: 12  KSVLNEKNVLFEYSTNLKAQSDAQFYRLEEEEVYQQMVKAKELILHAEKNHKRVHVTGVG 71

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K  ++    AS  +S GTP++F+   E  HG  G +   D++I +S SG++ EL+  L  
Sbjct: 72  KCSYVAGYAASLFSSVGTPTYFLDTTETVHGSAGQVVAGDVVIAISNSGNTKELEYALAA 131

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +     ++A+T    S +A  A++ L+     E       P +S I Q+     L++ L
Sbjct: 132 LKANGAVILAVTGNEDSSLASCAEVTLSSYVSQEGDSLNKPPRSSVIAQMIQLQVLSVLL 191

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVC 219
            E++  +  D+   HPGG LG     
Sbjct: 192 QEAKEINLEDYLKWHPGGSLGATTKK 217


>gi|162419263|ref|YP_001605767.1| SIS domain-containing protein [Yersinia pestis Angola]
 gi|162352078|gb|ABX86026.1| SIS domain protein [Yersinia pestis Angola]
          Length = 201

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 18  SRELAALKENVDQQVWLQ---VLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 75  YLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G
Sbjct: 135 VSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGYVG 194

Query: 215 TLFVC 219
            +   
Sbjct: 195 MVLRK 199


>gi|189464965|ref|ZP_03013750.1| hypothetical protein BACINT_01309 [Bacteroides intestinalis DSM
           17393]
 gi|189437239|gb|EDV06224.1| hypothetical protein BACINT_01309 [Bacteroides intestinalis DSM
           17393]
          Length = 258

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T   +S+M    ++     +  E + + ++   +           VE+I   KG++V +
Sbjct: 50  LTTNKNSIM----IESIQELLQKEAQAVLNIP--VTDAYERAVELIVEQIHRRKGKLVTS 103

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +
Sbjct: 104 GMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVEL 163

Query: 131 LYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
              A   +  +  I IT    S +A  +D+ L+  K  E C  G+ PTTS  +   IGD 
Sbjct: 164 TQLAHNLNPELKFIVITGNPDSPLAHESDVCLSTGKPKEVCALGMTPTTSTTVMTVIGDI 223

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           L + +++   F+  D+   H GG LG       +
Sbjct: 224 LVVQVMQQTGFTIGDYSKRHHGGYLGEKSRKLCE 257


>gi|171694451|ref|XP_001912150.1| hypothetical protein [Podospora anserina S mat+]
 gi|170947174|emb|CAP73979.1| unnamed protein product [Podospora anserina S mat+]
          Length = 438

 Score =  154 bits (389), Expect = 2e-35,   Method: Composition-based stats.
 Identities = 76/259 (29%), Positives = 114/259 (44%), Gaps = 29/259 (11%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAI--- 63
            ++      L     +  A+  +  E   L +L +  S        F+ AVE I      
Sbjct: 61  PAIAVADEKLAVEERLSNAVHVLSTETTALQNLTALYSTDRLAREGFNRAVEAITRCNHP 120

Query: 64  ---------------KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
                           G++V+ G+GKSGHI  KL +T  S    + F+H  EA HGDLG 
Sbjct: 121 KYPHHQHHSHSRGATDGKIVVIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDLGQ 180

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS---VVACHADIVLTLP-- 163
           I   D  +++++SG + EL  +L +  + S+PLI +TS  +     +  H    + LP  
Sbjct: 181 IGPRDTFLLITFSGKTPELLTLLPHLDK-SLPLILLTSHTRPETCELIKHRPDTILLPAP 239

Query: 164 -KEPESCPHGL-APTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFVCA 220
             EPE+   G+ APTTS  + L +GDALAI      + S  + F   HPGG +G      
Sbjct: 240 IHEPETKSFGVSAPTTSTTVALTVGDALAIVASRELHPSVASVFAKNHPGGAIGAALRKP 299

Query: 221 SDVMHSGDSIPLVKIGCPL 239
           S    S   + +     PL
Sbjct: 300 SSSEKSARELAVRMEMIPL 318


>gi|51597882|ref|YP_072073.1| phosphosugar isomerase/binding protein [Yersinia pseudotuberculosis
           IP 32953]
 gi|153947649|ref|YP_001399362.1| SIS domain-containing protein [Yersinia pseudotuberculosis IP
           31758]
 gi|170022687|ref|YP_001719192.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis YPIII]
 gi|186897079|ref|YP_001874191.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis PB1/+]
 gi|51591164|emb|CAH22829.1| putative phosphosugar isomerase/binding protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152959144|gb|ABS46605.1| SIS domain protein [Yersinia pseudotuberculosis IP 31758]
 gi|169749221|gb|ACA66739.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis YPIII]
 gi|186700105|gb|ACC90734.1| sugar isomerase (SIS) [Yersinia pseudotuberculosis PB1/+]
          Length = 201

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 103/185 (55%), Gaps = 3/185 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 18  SRELAALKENVDQQVWLQ---VLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 75  YLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G
Sbjct: 135 VSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGDVG 194

Query: 215 TLFVC 219
                
Sbjct: 195 MALRK 199


>gi|22124150|ref|NP_667573.1| hypothetical protein y0230 [Yersinia pestis KIM 10]
 gi|45443638|ref|NP_995177.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108809642|ref|YP_653558.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Antiqua]
 gi|108813692|ref|YP_649459.1| phosphosugar isomerase/binding protein [Yersinia pestis Nepal516]
 gi|145597561|ref|YP_001161637.1| phosphosugar isomerase/binding protein [Yersinia pestis Pestoides
           F]
 gi|153997424|ref|ZP_02022524.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CA88-4125]
 gi|165927541|ref|ZP_02223373.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165937396|ref|ZP_02225959.1| SIS domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|166012008|ref|ZP_02232906.1| SIS domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166214134|ref|ZP_02240169.1| SIS domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|167402017|ref|ZP_02307500.1| SIS domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167420638|ref|ZP_02312391.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167425540|ref|ZP_02317293.1| SIS domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|167468434|ref|ZP_02333138.1| phosphosugar isomerase/binding protein [Yersinia pestis FV-1]
 gi|218930648|ref|YP_002348523.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CO92]
 gi|229836781|ref|ZP_04456946.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Pestoides A]
 gi|229839319|ref|ZP_04459478.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229899883|ref|ZP_04515024.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229904195|ref|ZP_04519306.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Nepal516]
 gi|270488635|ref|ZP_06205709.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294505236|ref|YP_003569298.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Z176003]
 gi|21956906|gb|AAM83824.1|AE013623_1 hypothetical [Yersinia pestis KIM 10]
 gi|45438508|gb|AAS64054.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Microtus str. 91001]
 gi|108777340|gb|ABG19859.1| phosphosugar isomerase/binding protein [Yersinia pestis Nepal516]
 gi|108781555|gb|ABG15613.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Antiqua]
 gi|115349259|emb|CAL22226.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CO92]
 gi|145209257|gb|ABP38664.1| phosphosugar isomerase/binding protein [Yersinia pestis Pestoides
           F]
 gi|149289061|gb|EDM39141.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           CA88-4125]
 gi|165914501|gb|EDR33115.1| SIS domain protein [Yersinia pestis biovar Orientalis str. IP275]
 gi|165920435|gb|EDR37712.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           F1991016]
 gi|165989092|gb|EDR41393.1| SIS domain protein [Yersinia pestis biovar Antiqua str. E1979001]
 gi|166204621|gb|EDR49101.1| SIS domain protein [Yersinia pestis biovar Antiqua str. B42003004]
 gi|166961444|gb|EDR57465.1| SIS domain protein [Yersinia pestis biovar Orientalis str.
           MG05-1020]
 gi|167048603|gb|EDR60011.1| SIS domain protein [Yersinia pestis biovar Antiqua str. UG05-0454]
 gi|167055554|gb|EDR65347.1| SIS domain protein [Yersinia pestis biovar Mediaevalis str.
           K1973002]
 gi|229678313|gb|EEO74418.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Nepal516]
 gi|229687375|gb|EEO79450.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229695685|gb|EEO85732.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229705724|gb|EEO91733.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Pestoides A]
 gi|262363298|gb|ACY60019.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           D106004]
 gi|262367323|gb|ACY63880.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           D182038]
 gi|270337139|gb|EFA47916.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294355695|gb|ADE66036.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           Z176003]
 gi|320017199|gb|ADW00771.1| putative phosphosugar isomerase/binding protein [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 201

 Score =  153 bits (388), Expect = 3e-35,   Method: Composition-based stats.
 Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 3/185 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L+ ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 18  SRELAALKENVDQQVWLQ---VLDALAECRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 75  YLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+   L+    FS+     +HPGG +G
Sbjct: 135 VSALVLKTHVKQEIDPLNMLATTSIVLVLALFDAICACLMARTGFSKETLLAVHPGGDVG 194

Query: 215 TLFVC 219
            +   
Sbjct: 195 MVLRK 199


>gi|296416123|ref|XP_002837730.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295633613|emb|CAZ81921.1| unnamed protein product [Tuber melanosporum]
          Length = 437

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 79/234 (33%), Positives = 116/234 (49%), Gaps = 22/234 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKS 75
              +  A+R +  E   LS L             F  AVE I       G+V+I G+GKS
Sbjct: 53  EEVLSTAVRVLSTEAMALSCLSQLYATNPVARDGFVRAVEAISTAVVKGGKVIIIGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H  EA HGDLGM+   D+++++++SG++ EL ++L +  
Sbjct: 113 GKIGEKMVATMNSLGLLSVFMHPIEALHGDLGMVKPKDVLLLITFSGNTPELISLLPHL- 171

Query: 136 RFSIPLIAITSE---NKSVVACHADIVLTLP---KEPESCPHGL-APTTSAIMQLAIGDA 188
              +PLIA+TS    + S +       + LP    E E    G+ APTTS  + LA+GDA
Sbjct: 172 PGHLPLIALTSHISYHTSPLTRERKKAILLPAPIHEAEETSFGISAPTTSTTVALALGDA 231

Query: 189 LAIA----LLESRNFSEND-FYVLHPGGKL----GTLFVCASDVMHSGDSIPLV 233
           LA+     +         D F   HPGG +    G   V  SD+    + IP+V
Sbjct: 232 LAVVSARHVYTGDGEKPKDVFKRNHPGGAIGLGTGKGVVRVSDLAVRLEDIPVV 285


>gi|296823432|ref|XP_002850444.1| sugar isomerase [Arthroderma otae CBS 113480]
 gi|238837998|gb|EEQ27660.1| sugar isomerase [Arthroderma otae CBS 113480]
          Length = 436

 Score =  153 bits (387), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 104/220 (47%), Gaps = 20/220 (9%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---I 63
             +     +      +  A+  I  E+  L +LE   +           AVE+I      
Sbjct: 6   PDIDSASSAAPHPPPIDTAIHVIATERAALENLERVYTTNDLARNNLERAVEQIANTINA 65

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
             ++++ G+GKSG IG K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG 
Sbjct: 66  GSKLIVCGVGKSGKIGEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGK 125

Query: 124 SDELKAILYYARRFSIPLIAITSEN----KSVVA-CHADIVLTLP---KEPESCPHG-LA 174
           + EL  +L +    +  +I IT+        ++A  +++  + LP    EPE    G  A
Sbjct: 126 TSELLLVLPHL-PSTTSVIVITAHKQPSSCPLLAGSNSENTILLPSPIHEPEEVSFGVCA 184

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSE-----NDFYVLHP 209
           PT+S  + LA+GDALA+A+    + S        F   HP
Sbjct: 185 PTSSTTVALAVGDALALAVARRLHTSPGRGPAEIFKGYHP 224


>gi|255932281|ref|XP_002557697.1| Pc12g08670 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211582316|emb|CAP80494.1| Pc12g08670 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 437

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 72/208 (34%), Positives = 112/208 (53%), Gaps = 21/208 (10%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAI---KGRVVITGIGKSG 76
           S+V  A+  I  E+  L+ LE   Q +   Q     AV++I       G++V+ G+GKSG
Sbjct: 29  SSVVTAIHVISTERAALAHLEHIYQTDARAQHDLARAVDRITQSVREGGKLVVCGVGKSG 88

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G K+ +T+ S G  S F+H  EA HGDLG++  +D ++++S+SG S EL ++L +   
Sbjct: 89  KVGRKIEATMNSLGVYSAFLHPTEALHGDLGLVRPNDTVLLISFSGRSPELLSLLPHL-P 147

Query: 137 FSIPLIAITSEN----KSVVACH----ADIVLTLP-KEPESCPHG-LAPTTSAIMQLAIG 186
            ++P+IA+TS        +++ H      I+L  P  E E    G  APT+S  + L++G
Sbjct: 148 ATVPVIALTSHTHPASCPLLSLHGPLGMGILLPAPIHEDEEASFGVRAPTSSTTVALSLG 207

Query: 187 DALAIA----LLESRNFSE-NDFYVLHP 209
           DALAIA    L  +   S    F   HP
Sbjct: 208 DALAIATARKLHTATGKSPAEVFRGFHP 235


>gi|303239736|ref|ZP_07326260.1| sugar isomerase (SIS) [Acetivibrio cellulolyticus CD2]
 gi|302592673|gb|EFL62397.1| sugar isomerase (SIS) [Acetivibrio cellulolyticus CD2]
          Length = 206

 Score =  153 bits (386), Expect = 4e-35,   Method: Composition-based stats.
 Identities = 54/167 (32%), Positives = 89/167 (53%), Gaps = 3/167 (1%)

Query: 51  FQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
             F  A+  I+  +   GRV +TGIGK GH+   ++S L+STGTP++ +H  EA HG  G
Sbjct: 31  EDFFHALHIIQDSERKGGRVHVTGIGKPGHVSGYISSLLSSTGTPAYTLHGTEAVHGSAG 90

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +   D++I +S SG + ELK+ +   +     +I ++ +  S +A  +D  L      E
Sbjct: 91  QVVPGDVVIAISNSGETAELKSTVMTVKNNGAYIIGVSGKKDSWIAKVSDAFLYAGVSEE 150

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
             P   AP  S + ++ +  AL++ L  S+  + + +   HPGG LG
Sbjct: 151 GGPLNRAPRASILAEIIVLQALSVLLQCSKGLTPSQYVKWHPGGMLG 197


>gi|303233125|ref|ZP_07319798.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
 gi|302480710|gb|EFL43797.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
          Length = 201

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 98/201 (48%), Gaps = 5/201 (2%)

Query: 19  MKNSTVQCA--LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           M N+  Q A  L SI    + +S   +++  E        +  ++A  GRV +TGIGK G
Sbjct: 1   MSNNKEQVASYLDSIE---KSVSEYMNAIDVESLSAAKKLILDVQARGGRVHVTGIGKPG 57

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           H+    AS  +STGTP++ +H  E  HG  G     D++I +S SG + ELKA +   ++
Sbjct: 58  HVAGYAASLFSSTGTPTYELHGTECVHGSAGQTKPGDVVIAISNSGETAELKATVSCLQK 117

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             + +IA+T +  S +A HAD+ L    + E       P  S +++L     L+I L   
Sbjct: 118 IGVHIIALTGKATSWLAQHADVALIAGVKQEGDSMNKPPRASILVELIALQTLSILLQNE 177

Query: 197 RNFSENDFYVLHPGGKLGTLF 217
              +   +   HPGG LG   
Sbjct: 178 YELTPEQYVKWHPGGALGASI 198


>gi|238797904|ref|ZP_04641395.1| Phosphosugar isomerase/binding protein [Yersinia mollaretii ATCC
           43969]
 gi|238718209|gb|EEQ10034.1| Phosphosugar isomerase/binding protein [Yersinia mollaretii ATCC
           43969]
          Length = 187

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 55/180 (30%), Positives = 102/180 (56%), Gaps = 3/180 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L++L  ++  ++  Q    ++ +   +G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 4   SRELAALRENVDQQVWLQ---VLDMLAGCRGKIAVTGVGTSGIAARKVAHMLACVEQPAI 60

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +++A +A+HGDLG +   D+II++S  G+SDEL  +L   +R  + +I++T   +S +A 
Sbjct: 61  YLNATDAAHGDLGFLGAQDIIILISRGGNSDELTRLLPTLQRKQVKIISVTENEQSAIAQ 120

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            + +VL    + E  P  +  TTS ++ LA+ DA+   L+    F++     +HPGG +G
Sbjct: 121 VSTLVLKTHVQQEIDPLNMLATTSIVLVLALFDAICACLMARSGFTKETLLAVHPGGDVG 180


>gi|224536828|ref|ZP_03677367.1| hypothetical protein BACCELL_01704 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224521550|gb|EEF90655.1| hypothetical protein BACCELL_01704 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 250

 Score =  153 bits (386), Expect = 5e-35,   Method: Composition-based stats.
 Identities = 64/214 (29%), Positives = 110/214 (51%), Gaps = 8/214 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +T   +S+M    ++     +  E + + ++   +           VE+I   KG++V +
Sbjct: 42  LTTNKNSIM----IESIQELLQKEAQAVLNIP--VTDAYERAVELIVEQIHRRKGKLVTS 95

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GK+G I   +A+T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +
Sbjct: 96  GMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVEL 155

Query: 131 LYYARRFS--IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
              A   +  +  I IT    S +A  +D+ L+  K  E C  G+ PTTS  +   IGD 
Sbjct: 156 TQLAHNLNPDLKFIVITGNPDSPLAHESDVCLSTGKPKEVCALGMTPTTSTTVMTVIGDI 215

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           L + +++   F+  D+   H GG LG       +
Sbjct: 216 LVVQVMKQTGFTIGDYSKRHHGGYLGEKSRKLCE 249


>gi|293393449|ref|ZP_06637760.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
 gi|291424050|gb|EFE97268.1| arabinose 5-phosphate isomerase [Serratia odorifera DSM 4582]
          Length = 200

 Score =  152 bits (385), Expect = 6e-35,   Method: Composition-based stats.
 Identities = 58/203 (28%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M     Q A  +     R L+ L+  +    +  +   +  +   +G++ +TG+G SG  
Sbjct: 1   MSQQEWQRASEAWQLYSRELAQLDQRID---AADWQRLMTLLSGCRGKIAVTGVGTSGIA 57

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A  LA    P+ F+ A +A+HGDLG +  DDL+I++S  G+S+EL  +L       
Sbjct: 58  ARKIAHMLACVEQPAIFLDATDAAHGDLGFLRADDLLIMISRGGNSEELTRLLPTLAAKG 117

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + LI++T    S +A  A +V+    + E  P  +  TTS ++ LAI DA    L+    
Sbjct: 118 VTLISVTENPDSAIARAAQLVIATGVKNEVDPLNMLATTSIVLVLAIFDAACACLMVRSG 177

Query: 199 FSENDFYVLHPGGKLGTLFVCAS 221
           + ++    +HPGG +G       
Sbjct: 178 YDKDRLLAVHPGGNVGKSLREEH 200


>gi|160888632|ref|ZP_02069635.1| hypothetical protein BACUNI_01049 [Bacteroides uniformis ATCC 8492]
 gi|156861946|gb|EDO55377.1| hypothetical protein BACUNI_01049 [Bacteroides uniformis ATCC 8492]
          Length = 201

 Score =  152 bits (384), Expect = 8e-35,   Method: Composition-based stats.
 Identities = 59/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYERAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +++ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESNVCLSTGKPQEVCVLGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|257871180|ref|ZP_05650833.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257805344|gb|EEV34166.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 198

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 87/182 (47%), Gaps = 3/182 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           L  L  ++          A E I   +   GRV +TGIGK  ++   +AS L+STGTPS+
Sbjct: 10  LDELALAMDKIDEGSLEAAKETILQTEADGGRVHVTGIGKPSYVAGYIASLLSSTGTPSY 69

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F+   EA HG  G +   D++I +S SG + EL   +   +     +I ++  + S ++ 
Sbjct: 70  FLDGTEAVHGSSGQVKAGDVVIAISNSGETKELLYTVETLKNNGAKIIGVSKRSDSTLSH 129

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            +D+ L      E       P  S ++Q+ +   L++ L E+R  +   +   HPGG +G
Sbjct: 130 LSDVSLCAAVHKEGDLLNKPPRLSVLVQIIVLQKLSLLLQEARKLTPEMYVQWHPGGAIG 189

Query: 215 TL 216
             
Sbjct: 190 ES 191


>gi|315055921|ref|XP_003177335.1| sugar isomerase [Arthroderma gypseum CBS 118893]
 gi|311339181|gb|EFQ98383.1| sugar isomerase [Arthroderma gypseum CBS 118893]
          Length = 479

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 20/207 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSG 76
           S V  A+  I  E+  L +LE   +           AVE+I        ++++ G+GKSG
Sbjct: 57  SPVDTAIHVIATERAALENLERVYTTNELARNNMERAVEQIANTINAGSKLIVCGVGKSG 116

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG K+ +T+ S G    F+H  EA HGDLGM+   D I+ +++SG + EL  +L +   
Sbjct: 117 KIGEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTILFITYSGKTSELLLVLPHL-P 175

Query: 137 FSIPLIAITSENKSVV-----ACHADIVLTLP---KEPESCPHG-LAPTTSAIMQLAIGD 187
            +  +I IT+  +  +            + LP    EPE    G  APT+S  + LA+GD
Sbjct: 176 STTSVIVITAHKQPSLCPLLAGSSNANTILLPSPIHEPEEVSFGVCAPTSSTTVALAVGD 235

Query: 188 ALAIALLESRNFSE-----NDFYVLHP 209
           ALA+A+    + +        F   HP
Sbjct: 236 ALALAVARRLHTTPGRGPAEIFKGYHP 262


>gi|37719614|gb|AAR01918.1| unknown [Campylobacter jejuni]
          Length = 162

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 5/158 (3%)

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
           S    L +GDALA AL++ RNF  +DF + HPGG LG   +     +    ++P+V    
Sbjct: 1   STTATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDT 60

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
              D + +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NPK
Sbjct: 61  EFNDLVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKTSDKPRFDFKAKEIMSTNPK 119

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           V+  D + + A +++ +H I   +VV    K +GI+  
Sbjct: 120 VVDADAMASEAEEIMLKHKIKE-IVVSKEDKVVGIIQL 156


>gi|317477972|ref|ZP_07937155.1| SIS domain-containing protein [Bacteroides sp. 4_1_36]
 gi|316905886|gb|EFV27657.1| SIS domain-containing protein [Bacteroides sp. 4_1_36]
          Length = 201

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYERAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESDVCLSTGKPQEVCVLGMTPTTSTTAMTVIGDILVVQTMKQTGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|257865190|ref|ZP_05644843.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257871515|ref|ZP_05651168.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
 gi|257799124|gb|EEV28176.1| conserved hypothetical protein [Enterococcus casseliflavus EC30]
 gi|257805679|gb|EEV34501.1| conserved hypothetical protein [Enterococcus casseliflavus EC10]
          Length = 207

 Score =  152 bits (384), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 15/203 (7%)

Query: 32  IAEKRGLSSLESSLQGELSFQF------------HCAVEKIKAIKG---RVVITGIGKSG 76
           + EK  L +  ++L+ +   QF              A E I   +    RV +TG+GK  
Sbjct: 1   MNEKNVLFAYSTNLKAQSDAQFYRLEEEEVYQQMVKAKELILHAEKNHKRVHVTGVGKCS 60

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
           ++    AS  +S GTP++F+   E  HG  G +   D++I +S SG++ EL+  L   + 
Sbjct: 61  YVAGYAASLFSSVGTPAYFLDTTETVHGSAGQVVAGDVVIAISNSGNTKELEYALAALKA 120

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               ++A+T    S +A  A++ L+     E       P +S I Q+     L++ L E+
Sbjct: 121 NGAVILAVTGNEDSSLASCAEVTLSSYVSQEGDSLNKPPRSSVIAQMIQLQVLSVLLQEA 180

Query: 197 RNFSENDFYVLHPGGKLGTLFVC 219
           +  +  D+   HPGG LG     
Sbjct: 181 KEINLEDYLKWHPGGSLGATTKK 203


>gi|329956337|ref|ZP_08296934.1| sugar isomerase, KpsF/GutQ family [Bacteroides clarus YIT 12056]
 gi|328524234|gb|EGF51304.1| sugar isomerase, KpsF/GutQ family [Bacteroides clarus YIT 12056]
          Length = 201

 Score =  151 bits (383), Expect = 9e-35,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL-- 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  L  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPRLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAQESDVCLSTGSPKEVCTLGMTPTTSTTVMTVIGDILVVQTMQRTGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|255657585|ref|ZP_05402994.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-23m63]
 gi|296452735|ref|ZP_06894425.1| probable sugar-phosphate isomerase [Clostridium difficile NAP08]
 gi|296880011|ref|ZP_06903981.1| probable sugar-phosphate isomerase [Clostridium difficile NAP07]
 gi|296258425|gb|EFH05330.1| probable sugar-phosphate isomerase [Clostridium difficile NAP08]
 gi|296428988|gb|EFH14865.1| probable sugar-phosphate isomerase [Clostridium difficile NAP07]
          Length = 199

 Score =  151 bits (383), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L   +        + A   I   +   GRV +TGIGK GH+   ++S L+STGTP++ +
Sbjct: 15  ELSEFIASIDETSINKACNLIFEAEKNHGRVHVTGIGKPGHVSGYISSLLSSTGTPAYIL 74

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H  EA HG  G +   D++I +S SG + ELK  L   +     +I ++    S +   +
Sbjct: 75  HGTEAVHGSSGQVVEGDVVIAISNSGETQELKGTLETLKINGAKIIGVSGNESSFLKNIS 134

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           DI L    + E      AP  S + +  +  +L++AL  ++  +   +   HP G LG  
Sbjct: 135 DIFLFAGVKQEGDCLNKAPRASILAETIVLQSLSVALQYAKGLNTQQYLKWHPAGSLGKS 194

Query: 217 F 217
            
Sbjct: 195 I 195


>gi|328956133|ref|YP_004373466.1| sugar isomerase (SIS) [Coriobacterium glomerans PW2]
 gi|328456457|gb|AEB07651.1| sugar isomerase (SIS) [Coriobacterium glomerans PW2]
          Length = 212

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 84/192 (43%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +   +R +S+    +           + + +    RV +TGIGK  H+   +AS  +STG
Sbjct: 18  LSIARREISAFAERIDYNQLSSAKLLIREAERAGCRVHVTGIGKPAHVAGYVASLFSSTG 77

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP++ +H  EA HG  G +   D++I +S SG + ELKA +         +I++T    S
Sbjct: 78  TPAYELHGTEAVHGSSGQVRPGDIVIAISNSGETAELKATVSTLIANGAHIISVTGNPSS 137

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A   ++ L      E       P  S + ++     L+I L  +   +   +   HPG
Sbjct: 138 WLARVGEVELIASVSQEGDYMNKPPRVSVLAEIIELQCLSILLQRAYGLTPQSYVTWHPG 197

Query: 211 GKLGTLFVCASD 222
           G LG       D
Sbjct: 198 GSLGQSIRSTED 209


>gi|306834477|ref|ZP_07467590.1| arabinose 5-phosphate isomerase [Streptococcus bovis ATCC 700338]
 gi|304423279|gb|EFM26432.1| arabinose 5-phosphate isomerase [Streptococcus bovis ATCC 700338]
          Length = 199

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 9/205 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M N  +   + ++  E      L + ++     + +   E I   K   GRV +TGIGK 
Sbjct: 1   MSNLQLDYFINTLDTE------LHNFIRNIDKEKINLVAELILDAKQHGGRVHVTGIGKP 54

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            H+   +++ L+STGTP++F+ A E+ HG  G +   D++I +S SG + EL+  +   +
Sbjct: 55  SHVSQYISALLSSTGTPAYFLDATESVHGSAGQVMEGDIVIAISNSGETLELQQTIEALK 114

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           + SI ++++T  N S +A + D+ L    E E       P  S I ++ I  A++I L E
Sbjct: 115 KLSIKIVSVTGGNSSWLARNTDLTLFAGVEEEGDSFNKPPRASIIAEILILQAVSIVLQE 174

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCA 220
             + +   +++ HPGG LG      
Sbjct: 175 KSHLNMEQYHLWHPGGSLGKSLERK 199


>gi|310796048|gb|EFQ31509.1| SIS domain-containing protein [Glomerella graminicola M1.001]
          Length = 268

 Score =  151 bits (382), Expect = 1e-34,   Method: Composition-based stats.
 Identities = 69/220 (31%), Positives = 107/220 (48%), Gaps = 14/220 (6%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKI---KAIKGRVV 68
           +G        +  A+  +  E   L +L      E      F+ ++E +   +  +G+VV
Sbjct: 50  RGARASYEERLDGAIHVLRTEANALMALTQLYSSERVCRDGFYRSIEALSRHRDHRGKVV 109

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
             G+GKSG I  KL +T +S G P+ F+H  EA HGDLG++   D +I++++SG + EL 
Sbjct: 110 FIGVGKSGWIAKKLTATFSSLGLPAVFLHPTEALHGDLGVVGEYDTLIMITFSGKTPELM 169

Query: 129 AILYYARRFSIPLIAITS----ENKSVVACHADIVLT---LPKEPESCPHGLAPTTSAIM 181
            +L +      PLI +TS    E   +     D++L    +P+  +      APTTS  M
Sbjct: 170 LLLPHL-NKKCPLILLTSPTSMETCEIAKQRPDLILLPAPIPESEKDTFGVSAPTTSTTM 228

Query: 182 QLAIGDALA-IALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +A+GDALA +A  E        F   HPGG +G  F   
Sbjct: 229 AIAVGDALAYVASKEMYPSVSAVFAKNHPGGAIGQAFKTK 268


>gi|167764055|ref|ZP_02436182.1| hypothetical protein BACSTE_02438 [Bacteroides stercoris ATCC
           43183]
 gi|167698171|gb|EDS14750.1| hypothetical protein BACSTE_02438 [Bacteroides stercoris ATCC
           43183]
          Length = 201

 Score =  151 bits (382), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL-- 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  L  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPKLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAQESDVCLSTGSPKEVCILGMTPTTSTTVMTVIGDILVVQTMKKTGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|270294985|ref|ZP_06201186.1| conserved hypothetical protein [Bacteroides sp. D20]
 gi|270274232|gb|EFA20093.1| conserved hypothetical protein [Bacteroides sp. D20]
          Length = 201

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYERAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS--IPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPELKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESDVCLSTGKPQEVCALGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|29348715|ref|NP_812218.1| putative sugar isomerase [Bacteroides thetaiotaomicron VPI-5482]
 gi|253568942|ref|ZP_04846352.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298387078|ref|ZP_06996632.1| arabinose 5-phosphate isomerase [Bacteroides sp. 1_1_14]
 gi|29340621|gb|AAO78412.1| putative sugar isomerase [Bacteroides thetaiotaomicron VPI-5482]
 gi|251840961|gb|EES69042.1| conserved hypothetical protein [Bacteroides sp. 1_1_6]
 gi|298260228|gb|EFI03098.1| arabinose 5-phosphate isomerase [Bacteroides sp. 1_1_14]
          Length = 201

 Score =  151 bits (381), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 102/201 (50%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +    + +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IDSIKQLLQQEAQAVLNIP--VTDAYEKAVQLIVEQIHQKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS--IPL 141
           +T  STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTRLAHNLDPELKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +++ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLANESNVCLSTGKPAEVCTLGMTPTTSTTAMTVIGDILVVQTMKKTGFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG       +
Sbjct: 180 EEYSKRHHGGYLGEKSRSLCE 200


>gi|332827680|gb|EGK00419.1| hypothetical protein HMPREF9455_03267 [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 201

 Score =  150 bits (380), Expect = 2e-34,   Method: Composition-based stats.
 Identities = 65/186 (34%), Positives = 106/186 (56%), Gaps = 4/186 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           + AE   + ++   +    +      VE++   KG++V +G+GK+G I   +A+T +STG
Sbjct: 10  LSAEASAILNIP--VSDAYTKAIDLIVEQVNKKKGKLVTSGMGKAGQIAQNIATTFSSTG 67

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIAITSEN 148
           TPS F+H +EA HGDLG++  +D+++ +S SG + E+  ++  A+     I  I ITS+ 
Sbjct: 68  TPSVFLHPSEAQHGDLGILQENDIVLAISNSGKTREIIELISLAKNLIPGIKFIVITSDP 127

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S++A  AD+ +   +  E C  GL PTTS  +   IGD L +  ++  NFS  D+   H
Sbjct: 128 DSLLAQKADVCILTGRPEEVCNLGLTPTTSTTVMTVIGDILVVGTMKRINFSPADYAKRH 187

Query: 209 PGGKLG 214
            GG LG
Sbjct: 188 HGGYLG 193


>gi|255010248|ref|ZP_05282374.1| SIS-domain-containing protein [Bacteroides fragilis 3_1_12]
 gi|313148043|ref|ZP_07810236.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
 gi|313136810|gb|EFR54170.1| conserved hypothetical protein [Bacteroides fragilis 3_1_12]
          Length = 201

 Score =  150 bits (379), Expect = 3e-34,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++     +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IESIQELLQKEAQAVLNIP--VTNAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLASESDVCLSTGHPAEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTEFTI 179

Query: 202 NDFYVLHPGGKLGTLFVC 219
            ++   H GG LG     
Sbjct: 180 EEYSKRHHGGYLGEKSRK 197


>gi|153807210|ref|ZP_01959878.1| hypothetical protein BACCAC_01488 [Bacteroides caccae ATCC 43185]
 gi|149130330|gb|EDM21540.1| hypothetical protein BACCAC_01488 [Bacteroides caccae ATCC 43185]
          Length = 201

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +    + +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IDSIKQLLQQEAQAVLNIP--VTDAYEKAVQLIVEQIHQKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS--IPL 141
           +T  STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTQLAHNLDPELKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESDVCLSTGKPAEVCTLGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG       +
Sbjct: 180 AEYSKRHHGGYLGEKSRSLCE 200


>gi|257870064|ref|ZP_05649717.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
 gi|257804228|gb|EEV33050.1| conserved hypothetical protein [Enterococcus gallinarum EG2]
          Length = 204

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 9/208 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKS 75
           M+ + +   L++   E      L + L      Q   A E I A K   GRV +TGIGK 
Sbjct: 1   METTNLAYFLQTTKDE------LTAYLNEINQQQLIDAAELIVAAKKKKGRVHVTGIGKP 54

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            H+   +A+ L+STGTP++F+   E  HG  G   + D++I +S SG ++ELK  L   +
Sbjct: 55  SHVAEYIAALLSSTGTPTYFLDGTETIHGSAGQAEKGDVVIAISNSGETEELKKSLLTLK 114

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              I +I ++    S +  H+D  L      E  P    P  S + ++ +  +L+I L +
Sbjct: 115 ALGIKVIGVSGGIDSWLQKHSDAFLFAGITNEGDPLNKPPRISILAEIIVLQSLSILLQQ 174

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDV 223
                 +D+Y  HPGG LG+  +    V
Sbjct: 175 EAAIDIDDYYAWHPGGSLGSAIMQERSV 202


>gi|218131756|ref|ZP_03460560.1| hypothetical protein BACEGG_03377 [Bacteroides eggerthii DSM 20697]
 gi|317474629|ref|ZP_07933903.1| SIS domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
 gi|217986059|gb|EEC52398.1| hypothetical protein BACEGG_03377 [Bacteroides eggerthii DSM 20697]
 gi|316909310|gb|EFV30990.1| SIS domain-containing protein [Bacteroides eggerthii 1_2_48FAA]
          Length = 201

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/194 (30%), Positives = 99/194 (51%), Gaps = 4/194 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E + + ++   +           VE++   KG++V +G+GK+G I   +A+T
Sbjct: 4   SIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQVHHKKGKLVTSGMGKAGQIAMNIATT 61

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIA 143
             STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A     ++  I 
Sbjct: 62  FCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPNLKFIV 121

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+  D
Sbjct: 122 ITGNPDSPLAQESDVCLSTGSPKEVCILGMTPTTSTTVMTVIGDILVVQTMQRTGFTIED 181

Query: 204 FYVLHPGGKLGTLF 217
           +   H GG LG   
Sbjct: 182 YSKRHHGGYLGEKS 195


>gi|53711463|ref|YP_097455.1| putative sugar isomerase [Bacteroides fragilis YCH46]
 gi|60679733|ref|YP_209877.1| SIS-domain-containing protein [Bacteroides fragilis NCTC 9343]
 gi|253564475|ref|ZP_04841932.1| SIS-domain-containing protein [Bacteroides sp. 3_2_5]
 gi|265764862|ref|ZP_06093137.1| SIS-domain-containing protein [Bacteroides sp. 2_1_16]
 gi|52214328|dbj|BAD46921.1| putative sugar isomerase [Bacteroides fragilis YCH46]
 gi|60491167|emb|CAH05915.1| putative sugar isomerase SIS-domain protein [Bacteroides fragilis
           NCTC 9343]
 gi|251948251|gb|EES88533.1| SIS-domain-containing protein [Bacteroides sp. 3_2_5]
 gi|263254246|gb|EEZ25680.1| SIS-domain-containing protein [Bacteroides sp. 2_1_16]
 gi|301161195|emb|CBW20733.1| putative sugar isomerase SIS-domain protein [Bacteroides fragilis
           638R]
          Length = 201

 Score =  150 bits (378), Expect = 4e-34,   Method: Composition-based stats.
 Identities = 59/198 (29%), Positives = 100/198 (50%), Gaps = 4/198 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++     +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IESIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLASESDVCLSTGHPAEVCTLGMTPTTSTTVMTVIGDILVVQTMKRTEFTI 179

Query: 202 NDFYVLHPGGKLGTLFVC 219
            ++   H GG LG     
Sbjct: 180 EEYSKRHHGGYLGEKSRK 197


>gi|237716824|ref|ZP_04547305.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262405594|ref|ZP_06082144.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|294644526|ref|ZP_06722280.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CC 2a]
 gi|294805788|ref|ZP_06764665.1| sugar isomerase, KpsF/GutQ family [Bacteroides xylanisolvens SD CC
           1b]
 gi|298483824|ref|ZP_07001996.1| arabinose 5-phosphate isomerase [Bacteroides sp. D22]
 gi|229442807|gb|EEO48598.1| conserved hypothetical protein [Bacteroides sp. D1]
 gi|262356469|gb|EEZ05559.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
 gi|292640079|gb|EFF58343.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CC 2a]
 gi|294447009|gb|EFG15599.1| sugar isomerase, KpsF/GutQ family [Bacteroides xylanisolvens SD CC
           1b]
 gi|298270011|gb|EFI11600.1| arabinose 5-phosphate isomerase [Bacteroides sp. D22]
          Length = 201

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +    + +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IDSIKQLLQQEAQAVLNIP--ITDAYEKAVKLIVEQIHQKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTRLAHNLDPDLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAKESDVCLSTGKPAEVCVLGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG       +
Sbjct: 180 AEYSKRHHGGYLGEKSRSLCE 200


>gi|327306816|ref|XP_003238099.1| sugar isomerase [Trichophyton rubrum CBS 118892]
 gi|326458355|gb|EGD83808.1| sugar isomerase [Trichophyton rubrum CBS 118892]
          Length = 477

 Score =  149 bits (377), Expect = 5e-34,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDMAIHVIATERAALENLERVYSTNELARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L +    +
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHL-PST 177

Query: 139 IPLIAITS----ENKSVVACHADIV-LTLP---KEPESCPHG-LAPTTSAIMQLAIGDAL 189
             +I IT+     +  ++A  ++   + LP    EPE    G  APT+S  + LA+GDAL
Sbjct: 178 TSVIVITAYKQPSSCPLLAGSSNANTILLPSPIHEPEEVSFGVCAPTSSTTVALAVGDAL 237

Query: 190 AIALLESRNFSE-----NDFYVLHP 209
           A+A+    + +        F   HP
Sbjct: 238 ALAVARRLHTTPGRGPAEVFKGYHP 262


>gi|302653956|ref|XP_003018793.1| hypothetical protein TRV_07195 [Trichophyton verrucosum HKI 0517]
 gi|291182468|gb|EFE38148.1| hypothetical protein TRV_07195 [Trichophyton verrucosum HKI 0517]
          Length = 477

 Score =  149 bits (376), Expect = 6e-34,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNEMARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L +    +
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHFPP-T 177

Query: 139 IPLIAITS----ENKSVVACHADIV-LTLP---KEPESCPHG-LAPTTSAIMQLAIGDAL 189
             +I IT+     +  ++A  ++   + LP    EPE    G  APT+S  + LA+GDAL
Sbjct: 178 TSVIVITAYKQPSSCPLLAGSSNANTILLPSPIHEPEEVSFGVCAPTSSTTVALAVGDAL 237

Query: 190 AIALLESRNFSE-----NDFYVLHP 209
           A+A+    + +        F   HP
Sbjct: 238 ALAVARRLHTTPGRGPAEVFKGYHP 262


>gi|209870607|pdb|3ETN|A Chain A, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870608|pdb|3ETN|B Chain B, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870609|pdb|3ETN|C Chain C, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
 gi|209870610|pdb|3ETN|D Chain D, Crystal Structure Of Putative Phosphosugar Isomerase
           Involved In Capsule Formation (Yp_209877.1) From
           Bacteroides Fragilis Nctc 9343 At 1.70 A Resolution
          Length = 220

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 59/201 (29%), Positives = 97/201 (48%), Gaps = 4/201 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++     +  E + + ++   +           VE+I   KG++V +G GK+G I  
Sbjct: 18  QGXIESIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQIHRKKGKLVTSGXGKAGQIAX 75

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--S 138
            +A+T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A      
Sbjct: 76  NIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPG 135

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +  I IT    S +A  +D+ L+     E C  G  PTTS  +   IGD L +   +   
Sbjct: 136 LKFIVITGNPDSPLASESDVCLSTGHPAEVCTLGXTPTTSTTVXTVIGDILVVQTXKRTE 195

Query: 199 FSENDFYVLHPGGKLGTLFVC 219
           F+  ++   H GG LG     
Sbjct: 196 FTIEEYSKRHHGGYLGEKSRK 216


>gi|160882948|ref|ZP_02063951.1| hypothetical protein BACOVA_00910 [Bacteroides ovatus ATCC 8483]
 gi|237720581|ref|ZP_04551062.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|260172622|ref|ZP_05759034.1| putative sugar isomerase [Bacteroides sp. D2]
 gi|293373369|ref|ZP_06619725.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CMC 3f]
 gi|299146928|ref|ZP_07039995.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_23]
 gi|315920912|ref|ZP_07917152.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|156111631|gb|EDO13376.1| hypothetical protein BACOVA_00910 [Bacteroides ovatus ATCC 8483]
 gi|229450332|gb|EEO56123.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
 gi|292631655|gb|EFF50277.1| sugar isomerase, KpsF/GutQ family [Bacteroides ovatus SD CMC 3f]
 gi|295086071|emb|CBK67594.1| Predicted sugar phosphate isomerase involved in capsule formation
           [Bacteroides xylanisolvens XB1A]
 gi|298514813|gb|EFI38695.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_23]
 gi|313694787|gb|EFS31622.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 201

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +    + +  E + + ++   +           VE+I   KG++V +G+GK+G I   +A
Sbjct: 2   IDSIKQLLQQEAQAVLNIP--VTDAYEKAVKLIVEQIHQKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTRLAHNLDPDLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAKESDVCLSTGKPAEVCVLGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG       +
Sbjct: 180 AEYSKRHHGGYLGEKSRSLCE 200


>gi|302499485|ref|XP_003011738.1| hypothetical protein ARB_01966 [Arthroderma benhamiae CBS 112371]
 gi|291175291|gb|EFE31098.1| hypothetical protein ARB_01966 [Arthroderma benhamiae CBS 112371]
          Length = 477

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 20/205 (9%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNEMARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + EL  +L +    +
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHFPP-T 177

Query: 139 IPLIAITS----ENKSVVACHADIV-LTLP---KEPESCPHG-LAPTTSAIMQLAIGDAL 189
             +I IT+     +  ++A  ++   + LP    EPE    G  APT+S  + LA+GDAL
Sbjct: 178 TSVIVITAYKQPSSCPLLAGSSNANTILLPSPIHEPEEVSFGVCAPTSSTTVALAVGDAL 237

Query: 190 AIALLESRNFSE-----NDFYVLHP 209
           A+A+    + +        F   HP
Sbjct: 238 ALAVARRLHTTPGRGPAEVFKGYHP 262


>gi|163793297|ref|ZP_02187272.1| KpsF/GutQ family protein [alpha proteobacterium BAL199]
 gi|159181099|gb|EDP65614.1| KpsF/GutQ family protein [alpha proteobacterium BAL199]
          Length = 198

 Score =  149 bits (376), Expect = 7e-34,   Method: Composition-based stats.
 Identities = 64/188 (34%), Positives = 101/188 (53%), Gaps = 8/188 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           + AE   + S+       +   F  A++ +    G+++  G+GK+G +  + A+TLAST 
Sbjct: 11  LDAEAEAIRSI------RVDATFERALDAMANCPGKIITLGMGKAGFVARRFAATLASTA 64

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI--PLIAITSEN 148
           TP+F++H +EA+HGDLG I   D +I  S SG + E+   +  +R  +    +I ITS  
Sbjct: 65  TPAFYIHPSEAAHGDLGHIEDGDCMIAFSTSGKTREVLECIELSRHLNQHGTVIGITSHP 124

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +   AD+VL +    E CP GL P+ S     AI DAL + L+E +  + + + V H
Sbjct: 125 DSGLRDLADVVLDMGVIEEPCPLGLTPSASIAAMSAIADALTLTLMERKGVTRDQYGVRH 184

Query: 209 PGGKLGTL 216
            GG LG  
Sbjct: 185 HGGYLGRK 192


>gi|37719590|gb|AAR01895.1| unknown [Campylobacter jejuni]
          Length = 159

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 82/155 (52%), Gaps = 5/155 (3%)

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
             L +GDALA AL++ RNF  +DF + HPGG LG   +     +    ++P+V       
Sbjct: 1   ATLVMGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFN 60

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVIL 297
           D + +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NPKV+ 
Sbjct: 61  DLVDVMTSGKLG-LCVVLENEKLIGIITDGDLRRALKASDKPRFDFKAKEIMSTNPKVVD 119

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            D + + A +++ +H I   +VV    K +GI+  
Sbjct: 120 ADAMASEAEEIMLKHKIKE-IVVSKEDKVVGIIQL 153


>gi|319900498|ref|YP_004160226.1| Arabinose-5-phosphate isomerase [Bacteroides helcogenes P 36-108]
 gi|319415529|gb|ADV42640.1| Arabinose-5-phosphate isomerase [Bacteroides helcogenes P 36-108]
          Length = 201

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 58/196 (29%), Positives = 100/196 (51%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   +G++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDVYEKAVELIVEQVHRKRGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A     ++  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPNLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+     E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESDVCLSTGSPKEVCTLGMTPTTSTTVMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|329960671|ref|ZP_08299014.1| SIS domain protein [Bacteroides fluxus YIT 12057]
 gi|328532544|gb|EGF59338.1| SIS domain protein [Bacteroides fluxus YIT 12057]
          Length = 201

 Score =  148 bits (375), Expect = 9e-34,   Method: Composition-based stats.
 Identities = 57/196 (29%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   +G++V +G+GK+G I   +A
Sbjct: 2   IASIQELLQKEAQAVLNIP--VTDAYEKAVELIVEQVHRKRGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS--IPL 141
           +T  STG PS F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTRLAHNLNPDLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +++ L+     E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAHESNVCLSTGHPDEVCTLGMTPTTSTTAMTVIGDILVVQTMKETGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            D+   H GG LG   
Sbjct: 180 EDYSKRHHGGYLGEKS 195


>gi|300717700|ref|YP_003742503.1| phosphosugar isomerase/binding protein [Erwinia billingiae Eb661]
 gi|299063536|emb|CAX60656.1| Phosphosugar isomerase/binding protein [Erwinia billingiae Eb661]
          Length = 201

 Score =  148 bits (374), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 3/181 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  L++LES L  +   Q+   +  +   +G++ +TGIG SG    K+A  L+    P+ 
Sbjct: 18  RDALTTLESQLDRQ---QWLAVLNTLARCEGKIAVTGIGTSGIAARKIAHMLSCVERPAT 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           ++ AA+A+HGD+G +   D++I+LS  G+SDEL  +L   +     L+++T    S +A 
Sbjct: 75  WLSAADAAHGDIGFLRASDVLIMLSRGGNSDELTRLLPTVKSKGCTLVSVTENAGSAIAQ 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            AD +L +P+  E  P  +  TTS I  LA+ DA+   L+    +S      +HP G +G
Sbjct: 135 AADRLLLIPETQEIDPLNMLATTSIISVLAVFDAMIAVLMTQSGYSRETLLAVHPAGNVG 194

Query: 215 T 215
            
Sbjct: 195 K 195


>gi|309777489|ref|ZP_07672443.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914729|gb|EFP60515.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 200

 Score =  148 bits (373), Expect = 1e-33,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 88/182 (48%), Gaps = 3/182 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           S L  +++         A   I   +   GR+ +TGIGK GH+   +AS L+STGT ++ 
Sbjct: 14  SELGKNIEEMDMESIEKAARIIMESEKQGGRIHVTGIGKPGHVAGYIASLLSSTGTSAYE 73

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           +H  EA HG  G + + D++I +S SG + EL+A +         +I+ T   +S +A  
Sbjct: 74  LHGTEAVHGSSGQVKKGDVVIAISNSGETMELEATVQTLLANGAHIISCTGNPQSTLAKQ 133

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++ L    + E       P  S + ++ I   L++ L E++      +   HPGG LG 
Sbjct: 134 SEVCLVAHVDEEGDELNKPPRASILSEILILQCLSVVLQEAKKLDLKQYVKWHPGGSLGK 193

Query: 216 LF 217
             
Sbjct: 194 SI 195


>gi|218283016|ref|ZP_03489118.1| hypothetical protein EUBIFOR_01704 [Eubacterium biforme DSM 3989]
 gi|218216210|gb|EEC89748.1| hypothetical protein EUBIFOR_01704 [Eubacterium biforme DSM 3989]
          Length = 200

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/187 (31%), Positives = 94/187 (50%), Gaps = 7/187 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAI-------KGRVVITGIGKSGHIGSKLASTLASTG 90
           L++L+  +   ++     AVEK   I         RV +TGIGK GH+   +AS L+STG
Sbjct: 9   LTNLKEEVNKYIADVDLEAVEKAADIIMDAESKGNRVHVTGIGKPGHVAGYVASLLSSTG 68

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
           TP++ +H  EA HG  G +   D++I +S SG + EL+A +         +I+ T  ++S
Sbjct: 69  TPTYELHGTEAVHGSSGQVLPGDVVIAISNSGETTELQATVNTLLANGAHIISCTGNDQS 128

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +A  +++ L    + E       P  S I ++ +   L+  L E +N + N +   HPG
Sbjct: 129 TLAKASEVCLKAHVDKEGDSLNKPPRASIIAEIIVLQTLSDVLEERKNLTLNQYVKWHPG 188

Query: 211 GKLGTLF 217
           G LG   
Sbjct: 189 GSLGKSI 195


>gi|283786156|ref|YP_003366021.1| hypothetical protein ROD_24861 [Citrobacter rodentium ICC168]
 gi|282949610|emb|CBG89229.1| conserved hypothetical protein [Citrobacter rodentium ICC168]
          Length = 199

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/194 (30%), Positives = 104/194 (53%), Gaps = 3/194 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  Q A  +       L+ L   L      Q+   + +++  +G++V+TG+G SG    
Sbjct: 2   SSAWQQATATWRLYSEALAGLGEHLSET---QWQALMTELRGCRGKIVVTGVGTSGIAAR 58

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+A  LA    P+ +++A +A+HGDLG +  DDL+I+LS  G+SDEL  +L       +P
Sbjct: 59  KIAHMLACVERPAIYLNATDAAHGDLGFLGADDLMIMLSRGGNSDELTRLLPGLEAKKVP 118

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++++T    S +A  A +V++   + E+ P  +  TTS ++ +AI DA    L+    +S
Sbjct: 119 ILSVTENADSAIARAARLVISTGVQREADPLNMLATTSIMLVIAIFDAACACLMSESGYS 178

Query: 201 ENDFYVLHPGGKLG 214
                 +HPGG +G
Sbjct: 179 RETLLSVHPGGDVG 192


>gi|237732521|ref|ZP_04563002.1| sugar isomerase [Citrobacter sp. 30_2]
 gi|226908060|gb|EEH93978.1| sugar isomerase [Citrobacter sp. 30_2]
          Length = 199

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 60/201 (29%), Positives = 106/201 (52%), Gaps = 4/201 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +S  Q A          L+ L   L   L   +   + +++  +G++V+TG+G SG  
Sbjct: 1   MSDSWSQ-ATGVFQLYSDALAGLGQHLTEPL---WQSLMAELRGCQGKIVVTGVGTSGIA 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A  LA    P+ +++A +A+HGDLG +  +DL+I+LS  G+SDEL  +L      +
Sbjct: 57  ARKVAHMLACVERPAIYLNATDAAHGDLGFLRANDLVIMLSRGGNSDELTRLLPGLNARN 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P++++T    S +A  + +V++   + E+ P  +  TTS ++ LAI DA    L+    
Sbjct: 117 VPILSVTENADSAIAKASRLVISTGVQREADPLNMLATTSILLVLAIFDAACACLMSESG 176

Query: 199 FSENDFYVLHPGGKLGTLFVC 219
           +S+     +HPGG +G     
Sbjct: 177 YSKETLLSVHPGGDVGLTLSR 197


>gi|255690666|ref|ZP_05414341.1| arabinose 5-phosphate isomerase [Bacteroides finegoldii DSM 17565]
 gi|260623690|gb|EEX46561.1| arabinose 5-phosphate isomerase [Bacteroides finegoldii DSM 17565]
          Length = 201

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 101/201 (50%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +    + +  E + + ++   +           VE++    G++V +G+GK+G I   +A
Sbjct: 2   IDSIKQLLQQEAQAVLNIP--VTDAYEKAIQLIVEQVHQKNGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A      +  
Sbjct: 60  TTFCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTRLAHNLDPDLKF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  +D+ L+  K  E C  G+ PTTS      IGD L +  ++   F+ 
Sbjct: 120 IVITGNPDSPLAQESDVCLSTGKPAEVCTLGMTPTTSTTAMTVIGDILVVQTMKKTQFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG       +
Sbjct: 180 EEYSKRHHGGYLGEKSRSLCE 200


>gi|212692627|ref|ZP_03300755.1| hypothetical protein BACDOR_02124 [Bacteroides dorei DSM 17855]
 gi|237709063|ref|ZP_04539544.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|237724454|ref|ZP_04554935.1| SIS-domain-containing protein [Bacteroides sp. D4]
 gi|265752586|ref|ZP_06088155.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
 gi|212664912|gb|EEB25484.1| hypothetical protein BACDOR_02124 [Bacteroides dorei DSM 17855]
 gi|229437323|gb|EEO47400.1| SIS-domain-containing protein [Bacteroides dorei 5_1_36/D4]
 gi|229456759|gb|EEO62480.1| conserved hypothetical protein [Bacteroides sp. 9_1_42FAA]
 gi|263235772|gb|EEZ21267.1| conserved hypothetical protein [Bacteroides sp. 3_1_33FAA]
          Length = 200

 Score =  147 bits (372), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +  E + + ++   +           VE+I   KG++V TG+GK+G I   +A+
Sbjct: 3   TSIHELLQKEAQAVLNIP--ITDAYEKAVELIVEQIHRKKGKLVTTGMGKAGQIAMNIAT 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL--I 142
           T  STG P+ F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  L  I
Sbjct: 61  TFCSTGIPAVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPKLKYI 120

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            IT    S +A  +DI L      E C  G+ PTTS  +   IGD L +  ++   F+  
Sbjct: 121 VITGNADSPLARESDICLCTGHPDEVCALGMTPTTSTTVMTVIGDILVVETMKKTGFTIE 180

Query: 203 DFYVLHPGGKLGTLF 217
           ++   H GG LG   
Sbjct: 181 EYSKRHHGGYLGERS 195


>gi|309777380|ref|ZP_07672341.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914921|gb|EFP60700.1| arabinose 5-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 208

 Score =  147 bits (371), Expect = 2e-33,   Method: Composition-based stats.
 Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 3/195 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAI--KG-RVVITGIGKSGHIGSKLASTLASTGTPS 93
               L   +      Q   A + I+A   KG R+ +TGIGK  H+    AS L+STG+P+
Sbjct: 14  AEQQLHEVVNTYDMKQLEKAADMIQAAEQKGCRIHVTGIGKPSHLAGYAASLLSSTGSPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +F+   EA HG  G +  +D++I +S SG++ ELK  +   ++    +IA++    S + 
Sbjct: 74  YFLDGTEAVHGSAGQVAANDVVIAISNSGNTQELKQTIQTLKQNGAHIIAVSGNADSWLY 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            H+D  L    E E       P  S +++L +  +L++ L   +N +  D+   HPGG L
Sbjct: 134 THSDAQLYAHVEQEGDALNKPPRASILVELLVLQSLSVLLQYRKNITGKDYLKWHPGGSL 193

Query: 214 GTLFVCASDVMHSGD 228
           G        +  S D
Sbjct: 194 GEQTRREEQLCPSKD 208


>gi|302914571|ref|XP_003051163.1| hypothetical protein NECHADRAFT_41459 [Nectria haematococca mpVI
           77-13-4]
 gi|256732101|gb|EEU45450.1| hypothetical protein NECHADRAFT_41459 [Nectria haematococca mpVI
           77-13-4]
          Length = 412

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 72/215 (33%), Positives = 111/215 (51%), Gaps = 14/215 (6%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKI---KAIKGRVV 68
           +G   ++N  +   +  +  E   L SL    + +      F  +VE I   +   G+++
Sbjct: 59  RGECQLRNQRLLDGIHVLNTEALALRSLTRLYETDSVARDGFTQSVEAITRLQETTGKLI 118

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+GKSGHIG KL +T  S    + F+H  EA HGDLG+I  +D ++ +++SG + EL 
Sbjct: 119 IVGVGKSGHIGQKLVATFKSLAIQAVFLHPTEALHGDLGIIGPNDTLMFITYSGKTQELL 178

Query: 129 AILYYARRFSIPLIAITSENKS---VVACHADIVLTLPK---EPESCPHGL-APTTSAIM 181
            +L +    S+P+I +TS           H    + LP    EPE    G+ APTTS  +
Sbjct: 179 IMLPHLDE-SLPVILLTSHTSHETCEFIKHRPDTILLPAPIPEPEKTSFGVSAPTTSTTV 237

Query: 182 QLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGT 215
            LA+GDALA+A  +  + S  + F   HPGG +G 
Sbjct: 238 ALALGDALAVAASKEMHASVASVFARNHPGGAIGA 272


>gi|283832078|ref|ZP_06351819.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
 gi|291071703|gb|EFE09812.1| arabinose 5-phosphate isomerase [Citrobacter youngae ATCC 29220]
          Length = 199

 Score =  147 bits (371), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/201 (30%), Positives = 106/201 (52%), Gaps = 4/201 (1%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +S  Q A          L+ L   L   +   +   + +++  +G++V+TG+G SG  
Sbjct: 1   MSDSWSQ-ATGVFQIYSDALAGLGQHLTEPV---WQSLMAELRGCQGKIVVTGVGTSGIA 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K+A  LA    P+ +++A +A+HGDLG +  DDL+I+LS  G+SDEL  +L      +
Sbjct: 57  ARKVAHMLACVERPAIYLNATDAAHGDLGFLRADDLVIMLSRGGNSDELTRLLPGLAARN 116

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +PL+++T    S +A  + +V++   + E+ P  +  TTS ++ LAI DA    L+    
Sbjct: 117 VPLLSVTENADSAIAKASRLVISTGVQREADPLNMLATTSILLVLAIFDAACACLMSESG 176

Query: 199 FSENDFYVLHPGGKLGTLFVC 219
           +S+     +HPGG +G     
Sbjct: 177 YSKETLLAVHPGGDVGLTLSR 197


>gi|319639944|ref|ZP_07994671.1| sugar isomerase [Bacteroides sp. 3_1_40A]
 gi|317388222|gb|EFV69074.1| sugar isomerase [Bacteroides sp. 3_1_40A]
          Length = 199

 Score =  146 bits (370), Expect = 3e-33,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +  E + + ++   +           VE+I   KG++V TG+GK+G I   +A+
Sbjct: 2   TSIHELLQKEAQAVLNIP--ITDAYEKAVELIVEQIHRKKGKLVTTGMGKAGQIAMNIAT 59

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL--I 142
           T  STG P+ F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  L  I
Sbjct: 60  TFCSTGIPAVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPNLKYI 119

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            IT    S +A  +DI L      E C  G+ PTTS  +   IGD L +  ++   F+  
Sbjct: 120 VITGNADSPLARESDICLCTGHPDEVCALGMTPTTSTTVMTVIGDILVVETMKKTGFTIE 179

Query: 203 DFYVLHPGGKLGTLF 217
           ++   H GG LG   
Sbjct: 180 EYSKRHHGGYLGERS 194


>gi|281500869|pdb|3K2V|A Chain A, Structure Of The Cbs Pair Of A Putative D-Arabinose
           5-Phosph Isomerase From Klebsiella Pneumoniae Subsp.
           Pneumoniae.
 gi|281500870|pdb|3K2V|B Chain B, Structure Of The Cbs Pair Of A Putative D-Arabinose
           5-Phosph Isomerase From Klebsiella Pneumoniae Subsp.
           Pneumoniae
          Length = 149

 Score =  146 bits (370), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/146 (34%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF + HPGG LG   +   +D+ H+GD IP V +   L DA+  ++ K  G  
Sbjct: 5   ARGFTAEDFALSHPGGALGRKLLLRVNDIXHTGDEIPHVGLQATLRDALLEITRKNLGXT 64

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           A+ D+   + GI T+GD+ R F    D    S+ DV  +    I   TL   A+ L +  
Sbjct: 65  AICDDDXNIIGIFTDGDLRRVFDTGVDXRDASIADVXTRGGIRIRPGTLAVDALNLXQSR 124

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
           +I+ ++V D     +G+VH  DLLR 
Sbjct: 125 HITCVLVADGD-HLLGVVHXHDLLRA 149


>gi|161334744|gb|ABX61079.1| hypothetical protein [Campylobacter jejuni]
          Length = 155

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 5/151 (3%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +GDALA AL++ RNF  +DF + HPGG LG   +     +    ++P+V       D + 
Sbjct: 1   MGDALAAALMKVRNFKPDDFALFHPGGSLGRKLLTKVKDLMVSSNLPIVHPDTEFNDLVD 60

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTL 301
           +++  + G + VV E +KL GIIT+GD+ R      K       +++M  NPKV+  D +
Sbjct: 61  VMTSGKLG-LCVVLENEKLVGIITDGDLRRALKTSDKPRFDFRAKEIMSTNPKVVDADAM 119

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + A +++ +H I   +VV    K IGI+  
Sbjct: 120 ASEAEEIMLKHKIKE-IVVSKENKIIGIIQL 149


>gi|333029479|ref|ZP_08457540.1| Arabinose-5-phosphate isomerase [Bacteroides coprosuis DSM 18011]
 gi|332740076|gb|EGJ70558.1| Arabinose-5-phosphate isomerase [Bacteroides coprosuis DSM 18011]
          Length = 201

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 58/201 (28%), Positives = 100/201 (49%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++     +  E   + ++   +  +     +  V+++   KG++V +G+GK+G I   +A
Sbjct: 2   IEAIQELLRNEANAILNIP--ITEDYEKAVNLIVQQVHEKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPL 141
           +T  STG P+ F+H +EA HGDLG++  +DL +++S SG + E+  +   AR    +I  
Sbjct: 60  TTFCSTGIPAVFLHPSEAQHGDLGILQENDLFLMISNSGKTREIVELTRLARLLAPNIQF 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  A + +      E C  G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNLDSPLAKEASVAICTGNPKEVCLLGMTPTTSTTVMTVIGDILVVETMKKTGFTA 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            D+   H GG LG        
Sbjct: 180 ADYSKRHHGGYLGEKSRSLCS 200


>gi|150003839|ref|YP_001298583.1| putative sugar isomerase [Bacteroides vulgatus ATCC 8482]
 gi|254880936|ref|ZP_05253646.1| SIS-domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|294775005|ref|ZP_06740534.1| SIS domain protein [Bacteroides vulgatus PC510]
 gi|149932263|gb|ABR38961.1| putative sugar isomerase [Bacteroides vulgatus ATCC 8482]
 gi|254833729|gb|EET14038.1| SIS-domain-containing protein [Bacteroides sp. 4_3_47FAA]
 gi|294451049|gb|EFG19520.1| SIS domain protein [Bacteroides vulgatus PC510]
          Length = 200

 Score =  146 bits (369), Expect = 4e-33,   Method: Composition-based stats.
 Identities = 61/195 (31%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +  E + + ++   +           VE+I   KG++V TG+GK+G I   +A+
Sbjct: 3   TSIHELLQKEAQAVLNIP--ITDAYEKAVELIVEQIHRKKGKLVTTGMGKAGQIAMNIAT 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL--I 142
           T  STG P+ F+H +EA HGDLG++  +DL++++S SG + E+  +   A   +  L  I
Sbjct: 61  TFCSTGIPAVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNLNPNLKYI 120

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            IT    S +A  +DI L      E C  G+ PTTS  +   IGD L +  ++   F+  
Sbjct: 121 VITGNADSPLARESDICLCTGHPDEVCALGMTPTTSTTVMTVIGDILVVETMKKTGFTIE 180

Query: 203 DFYVLHPGGKLGTLF 217
           ++   H GG LG   
Sbjct: 181 EYSKRHHGGYLGERS 195


>gi|332886139|gb|EGK06383.1| hypothetical protein HMPREF9456_00257 [Dysgonomonas mossii DSM
           22836]
          Length = 201

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 66/192 (34%), Positives = 110/192 (57%), Gaps = 3/192 (1%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           +RSI+ E    + L   +    S      VE++   KG++V +G+GK+G I   +A+T +
Sbjct: 6   IRSIL-EHESSAILNIPISDAYSRAIDLIVEQVNQKKGKLVTSGMGKAGQIAQNIATTFS 64

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIAIT 145
           STGTP+ F+H +EA HGDLG++  +D+++ +S SG + E+  ++  A+     I  I IT
Sbjct: 65  STGTPAVFLHPSEAQHGDLGILQENDIVLAISNSGKTREIIELITLAKDLIPGIKFIVIT 124

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S+++S++A  AD+ +   +  E C  GL PTTS  +   IGD L +  ++   F++ D+ 
Sbjct: 125 SDSESLLAQKADVFIHTGRPEEVCTLGLTPTTSTTVMTVIGDILVVGTMKRIGFTKVDYA 184

Query: 206 VLHPGGKLGTLF 217
             H GG LG   
Sbjct: 185 KRHHGGYLGQKS 196


>gi|189460622|ref|ZP_03009407.1| hypothetical protein BACCOP_01263 [Bacteroides coprocola DSM 17136]
 gi|189432581|gb|EDV01566.1| hypothetical protein BACCOP_01263 [Bacteroides coprocola DSM 17136]
          Length = 200

 Score =  146 bits (369), Expect = 5e-33,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 4/201 (1%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   ISSIHELLQREAQAVLNIP--VTDAYEKAVELIVEQVHRKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL-- 141
           +T  STG P+ F+H +EA HGDLG++  +DL++++S SG + E+  +   A R +  L  
Sbjct: 60  TTFCSTGIPAVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTDLADRLNPSLKK 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT   +S +A  ADI L      E CP G+ PTTS  +   IGD L +  ++   F+ 
Sbjct: 120 IVITGNPESPLAEAADICLATGHPDEVCPLGMTPTTSTTIMTVIGDILVVETMKQTGFTI 179

Query: 202 NDFYVLHPGGKLGTLFVCASD 222
            ++   H GG LG      S 
Sbjct: 180 EEYSKRHHGGYLGERSRALSK 200


>gi|255013216|ref|ZP_05285342.1| putative sugar isomerase [Bacteroides sp. 2_1_7]
 gi|256838219|ref|ZP_05543729.1| conserved hypothetical protein [Parabacteroides sp. D13]
 gi|256739138|gb|EEU52462.1| conserved hypothetical protein [Parabacteroides sp. D13]
          Length = 234

 Score =  146 bits (368), Expect = 6e-33,   Method: Composition-based stats.
 Identities = 62/211 (29%), Positives = 113/211 (53%), Gaps = 7/211 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           ++  ++  + M N  +      +  E   + ++   +           V+ +  + G+++
Sbjct: 22  RNAVKQSINNMVNENITS---LLEQEAEAVRNIP--VTPGYEEAVSLIVKHVHDLGGKLI 76

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ++G+GK+G I   +A+T +STGTP+FF+H +EA HGDLG++ ++D+++++S SG + EL 
Sbjct: 77  MSGMGKAGQIALNIATTFSSTGTPAFFLHPSEAQHGDLGIVCKNDIMLLISNSGKTRELV 136

Query: 129 AILYYARRF--SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
            ++   R     +  I ITS   S +A  A++ L      E CP GL PTTS  +   IG
Sbjct: 137 ELVDLTRGLVPDMKFIVITSNPDSPLAAEANVCLLTGAPKEVCPLGLTPTTSTTVMTVIG 196

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           D L +  ++  +F+  D+   H GG LG+  
Sbjct: 197 DILVVGTMKRIHFTNKDYAKRHHGGYLGSKS 227


>gi|34539957|ref|NP_904436.1| SIS domain-containing protein [Porphyromonas gingivalis W83]
 gi|34396268|gb|AAQ65335.1| SIS domain protein [Porphyromonas gingivalis W83]
          Length = 206

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 4/199 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E   + ++ +    +        V ++    GR++ +G+GK+G I + +A+T
Sbjct: 9   TISEILAHEAEAIRTIPA--DNDYKAAIDLIVRQVHGSNGRLITSGMGKAGQIAANIATT 66

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIA 143
            +STGTP++F+H +EA HGDLG++   D+++++S SG + E+  ++   +R       I 
Sbjct: 67  FSSTGTPAYFLHPSEAQHGDLGLVRSGDIMLLISNSGRTREVLELVELTKRLVPDTKFIL 126

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A   D+ L      E CP G+ PTTS  +   IGD L +  ++   F   D
Sbjct: 127 ITGNPESQLAAEVDVCLATGNPAEVCPLGMTPTTSTTVMTVIGDVLVVGTMQEIGFGFED 186

Query: 204 FYVLHPGGKLGTLFVCASD 222
           +   H GG LG        
Sbjct: 187 YARRHHGGYLGDRSREICG 205


>gi|116197593|ref|XP_001224608.1| hypothetical protein CHGG_06952 [Chaetomium globosum CBS 148.51]
 gi|88178231|gb|EAQ85699.1| hypothetical protein CHGG_06952 [Chaetomium globosum CBS 148.51]
          Length = 416

 Score =  145 bits (367), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 73/223 (32%), Positives = 110/223 (49%), Gaps = 14/223 (6%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKI---KAI 63
             +T     L     +  A+  I  E   L  L +    +      F  AV+ I      
Sbjct: 53  PDITVCAKKLAIEERLSRAVHVIATETTALQHLTNLYSSDRCARDGFTRAVDTITTRHGN 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G++V+ G+GKSGHI  KL +T  S    S F+H  EA HGDLG I+R D ++++++SG 
Sbjct: 113 GGKLVVIGVGKSGHIAKKLVATFNSFAITSVFLHPTEALHGDLGQISRHDTLLMITFSGK 172

Query: 124 SDELKAILYYARRFSIPLIAITSENKSV---VACHADIVLTLP---KEPESCPHGL-APT 176
           + EL  +L +  + S+PL+ +TS  +     +  H    + LP    E E+   G+ APT
Sbjct: 173 TPELLTLLPHLDK-SLPLLILTSHIRPETCDLVRHRPDTILLPAPVHEAETASFGVAAPT 231

Query: 177 TSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFV 218
           TS  + LA+GDALA+ +      S  + F   HPGG +G  F 
Sbjct: 232 TSTTVALAVGDALAVVVSRELYPSVSSVFSRNHPGGAIGAAFH 274


>gi|218258506|ref|ZP_03474862.1| hypothetical protein PRABACTJOHN_00517 [Parabacteroides johnsonii
           DSM 18315]
 gi|218225382|gb|EEC98032.1| hypothetical protein PRABACTJOHN_00517 [Parabacteroides johnsonii
           DSM 18315]
          Length = 205

 Score =  145 bits (365), Expect = 1e-32,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +   L+    E   + ++   +           V+ +  + G ++ +G+GK+G I
Sbjct: 1   MINEAISSILQ---QEAEAVRNIP--ITNGYEEAVTLIVKHVHELGGNLITSGMGKAGQI 55

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF- 137
              +A+T  STGTP++F+H +EA HGDLG++ ++D+++++S SG + EL  ++   R   
Sbjct: 56  AMNIATTFCSTGTPAYFLHPSEAQHGDLGIVRKNDVMLLISNSGKTRELLELVELTRGLV 115

Query: 138 -SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +  I IT    S +A  A I L      E CP GL PTTS  +   IGD L +  ++ 
Sbjct: 116 PEMQFIVITGNPDSPLAAEATICLPTGAPKEVCPLGLTPTTSTTVMTVIGDLLVVGTMKR 175

Query: 197 RNFSENDFYVLHPGGKLGTLF 217
            NF   D+   H GG LG+  
Sbjct: 176 INFGYPDYAKRHHGGYLGSKS 196


>gi|156055432|ref|XP_001593640.1| hypothetical protein SS1G_05068 [Sclerotinia sclerotiorum 1980]
 gi|154702852|gb|EDO02591.1| hypothetical protein SS1G_05068 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 402

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 101/351 (28%), Positives = 153/351 (43%), Gaps = 47/351 (13%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           N  +  A+  +  E   LSSL      +      F  AVE IK     +G++VI G+GKS
Sbjct: 64  NQRLTRAVHVLSTEATSLSSLTMLYDTDPVARDGFSHAVEAIKKSIGERGKLVICGVGKS 123

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI  KL +T+ S   P+ F+HA EA HGD+G I   D I+++++SG + EL  +L +  
Sbjct: 124 GHIAQKLVATMRSLKIPAIFIHATEAVHGDVGAIGIYDTILLITFSGKTKELVDLLPHL- 182

Query: 136 RFSIPLIAITSENKSVV-----ACHADIVLTLP-KEPESCPHGL-APTTSAIMQLAIGDA 188
             S+P+I +T                 I+L  P  E E+   G  APTTS  M +A+GDA
Sbjct: 183 DPSLPMIVLTGHRHRSSCEIINLRPKAILLPAPIHESETLSFGCSAPTTSTTMAIAVGDA 242

Query: 189 LAIALLESRNFS-ENDFYVLHPGGKLGTLFVCASDV----MHSGDSIPLVKIGCPLIDAI 243
           LA+A     +      F   HPGG +G  F     V    +   D   L        D +
Sbjct: 243 LALATARELHSDIAAVFSKNHPGGAIGAAFKATQTVSDIAICLADMPDLGNGPNTGADVL 302

Query: 244 TILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMI--KNPK 294
                      R G   V+              I +    D+N+   S+  +MI   N  
Sbjct: 303 IKAYGSESGWVRCGTDIVIPPSC----------IKQLGKSDMNSSATSINGLMIPKTNWI 352

Query: 295 VILEDTLLTVAMQL----LRQHNISV-----LMVVDDCQKAIGIVHFLDLL 336
            I  DT ++ A +L    + + + +      L ++DD +  IG++   DL+
Sbjct: 353 TIPADTEVSAAKELYGNFISETSFTHSDNTILAIMDDLE-LIGVLQIGDLV 402


>gi|154490033|ref|ZP_02030294.1| hypothetical protein PARMER_00262 [Parabacteroides merdae ATCC
           43184]
 gi|154089475|gb|EDN88519.1| hypothetical protein PARMER_00262 [Parabacteroides merdae ATCC
           43184]
          Length = 205

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 63/201 (31%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M N  +   L+    E   + ++   +           V+ +  + G ++ +G+GK+G I
Sbjct: 1   MINEAISSILQ---QEAEAVRNIP--ITDGYEEAVTLIVKHVHELGGNLITSGMGKAGQI 55

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF- 137
              +A+T  STGTP++F+H +EA HGDLG++ ++D+++++S SG + EL  ++   R   
Sbjct: 56  AMNIATTFCSTGTPAYFLHPSEAQHGDLGIVRKNDVMLLISNSGKTRELLELVELTRGLV 115

Query: 138 -SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +  I IT    S +A  A I L      E CP GL PTTS  +   IGD L +  ++ 
Sbjct: 116 PEMQFIVITGNPDSPLAAEATICLPTGAPKEVCPLGLTPTTSTTVMTVIGDLLVVGTMKR 175

Query: 197 RNFSENDFYVLHPGGKLGTLF 217
            NF   D+   H GG LG+  
Sbjct: 176 INFGYPDYAKRHHGGYLGSKS 196


>gi|188995897|ref|YP_001930149.1| probable sugar isomerase [Porphyromonas gingivalis ATCC 33277]
 gi|188595577|dbj|BAG34552.1| probable sugar isomerase [Porphyromonas gingivalis ATCC 33277]
          Length = 213

 Score =  144 bits (364), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 4/199 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E   + ++ +    +        V ++    GR++ +G+GK+G I + +A+T
Sbjct: 16  TISEILAHEAEAIRTIPA--DNDYKAAIGLIVRQVHGSNGRLITSGMGKAGQIAANIATT 73

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIA 143
            +STGTP++F+H +EA HGDLG++   D+++++S SG + E+  ++   +R       I 
Sbjct: 74  FSSTGTPAYFLHPSEAQHGDLGLVRSGDIMLLISNSGRTREVLELVELTKRLVPDTKFIL 133

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT   +S +A   D+ L      E CP G+ PTTS  +   IGD L +  ++   F   D
Sbjct: 134 ITGNPESQLAAEVDVCLATGNPAEVCPLGMTPTTSTTVMTVIGDVLVVGTMQEIGFGFED 193

Query: 204 FYVLHPGGKLGTLFVCASD 222
           +   H GG LG        
Sbjct: 194 YARRHHGGYLGDRSREICG 212


>gi|160914258|ref|ZP_02076479.1| hypothetical protein EUBDOL_00268 [Eubacterium dolichum DSM 3991]
 gi|158433885|gb|EDP12174.1| hypothetical protein EUBDOL_00268 [Eubacterium dolichum DSM 3991]
          Length = 200

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 57/193 (29%), Positives = 91/193 (47%), Gaps = 9/193 (4%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG---RVVITGIGKSGHIGSKLAS 84
           LR+I  E      ++S ++         A   I   +    RV +TGIGK GH+   +AS
Sbjct: 9   LRNIQNE------MDSYIENVDLTAVEKAANIILDAEAKGKRVHVTGIGKPGHVAGYIAS 62

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L+STGTPS+ +H  EA HG  G +   D++I +S SG + ELKA +    +    +I+ 
Sbjct: 63  LLSSTGTPSYELHGTEAVHGSSGQVLTGDVVIAISNSGETSELKATVDTLLKNGARIISC 122

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T    S +A  +++ L      E       P  S + ++ +   L+  L E ++ +   +
Sbjct: 123 TGNEHSSLAQSSEVCLKAQVGREGDSLNKPPRASILAEIIVLQLLSDLLQEHKHLNLEQY 182

Query: 205 YVLHPGGKLGTLF 217
              HPGG LG   
Sbjct: 183 VKWHPGGSLGKSI 195


>gi|32453539|ref|NP_861745.1| RB69ORF055c hypothetical protein [Enterobacteria phage RB69]
 gi|32350358|gb|AAP75957.1| RB69ORF055c hypothetical protein [Enterobacteria phage RB69]
          Length = 211

 Score =  144 bits (363), Expect = 2e-32,   Method: Composition-based stats.
 Identities = 61/207 (29%), Positives = 104/207 (50%), Gaps = 10/207 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-----AIKGRVVITGIG 73
           MK + +  A+ +II +   L+++   +      +++  +E ++       + RV+ITG+G
Sbjct: 1   MKTTPITIAIDAIIKQASSLAAMAKVISQN-PARYNAILETLRRPGLSNYESRVIITGVG 59

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
           K+ +I +K + T AS G PS +++    SHGD G I  +D++I +S SG ++E+  +  +
Sbjct: 60  KNANIATKASETFASLGIPSMYLNTGHYSHGDAGFIAPNDVLIHISRSGKTEEMIGVAKH 119

Query: 134 AR--RFSIPLIAITSENKSVVACHA--DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  R ++  I +           A  D         E   + LAPT S  + LA+ D  
Sbjct: 120 LKMIRPNVKQILLHCNPDIPQENEALFDYSFCTGIAVEVDENSLAPTMSTTLLLALIDTF 179

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTL 216
           AI L   R F+ NDF   HPGG LG +
Sbjct: 180 AINLSSERGFTSNDFLKFHPGGALGAM 206


>gi|222143233|pdb|3FNA|A Chain A, Crystal Structure Of The Cbs Pair Of Possible D-Arabinose
           5- Phosphate Isomerase Yrbh From Escherichia Coli Cft073
 gi|222143234|pdb|3FNA|B Chain B, Crystal Structure Of The Cbs Pair Of Possible D-Arabinose
           5- Phosphate Isomerase Yrbh From Escherichia Coli Cft073
          Length = 149

 Score =  143 bits (362), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 4/146 (2%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFV-CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +R F+  DF + HPGG LG   +   +D+ H+GD IP VK    L DA+  ++ K  G  
Sbjct: 5   ARGFTAEDFALSHPGGALGRKLLLRVNDIXHTGDEIPHVKKTASLRDALLEVTRKNLGXT 64

Query: 255 AVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + D+   ++GI T+GD+ R F    D+  LS+ DV       +    L   A+ L +  
Sbjct: 65  VICDDNXXIEGIFTDGDLRRVFDXGVDVRRLSIADVXTPGGIRVRPGILAVEALNLXQSR 124

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
           +I+ + V D     +G++H  DLLR 
Sbjct: 125 HITSVXVADGD-HLLGVLHXHDLLRA 149


>gi|224023563|ref|ZP_03641929.1| hypothetical protein BACCOPRO_00266 [Bacteroides coprophilus DSM
           18228]
 gi|224016785|gb|EEF74797.1| hypothetical protein BACCOPRO_00266 [Bacteroides coprophilus DSM
           18228]
          Length = 200

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 60/196 (30%), Positives = 99/196 (50%), Gaps = 4/196 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +      +  E + + ++   +           VE++   KG++V +G+GK+G I   +A
Sbjct: 2   ISSINELLKREAQAVLNIP--VTDAYEKAVALIVEQVHEKKGKLVTSGMGKAGQIAMNIA 59

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI--PL 141
           +T  STG P+ F+H +EA HGDLG++  +DL++++S SG + E+  +   AR+ +     
Sbjct: 60  TTFCSTGIPAVFLHPSEAQHGDLGILQENDLMLLISNSGKTREIVELTELARKLNPDMKK 119

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I IT    S +A  ADI L      E C  G+ PTTS  +   IGD L +  +    F+ 
Sbjct: 120 IVITGNPDSPLAQAADICLATGHPDEVCLLGMTPTTSTTVMTVIGDILVVETMRRTGFTI 179

Query: 202 NDFYVLHPGGKLGTLF 217
            ++   H GG LG   
Sbjct: 180 EEYSKRHHGGYLGERS 195


>gi|213580562|ref|ZP_03362388.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
          Length = 133

 Score =  143 bits (361), Expect = 3e-32,   Method: Composition-based stats.
 Identities = 55/136 (40%), Positives = 83/136 (61%), Gaps = 4/136 (2%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1   MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
           G K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S+SG + EL  I+      S
Sbjct: 57  GKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKS 116

Query: 139 IPLIAITSENKSVVAC 154
           + L+A+T +  S +  
Sbjct: 117 VALLAMTGKPHSPLGR 132


>gi|322832397|ref|YP_004212424.1| sugar isomerase (SIS) [Rahnella sp. Y9602]
 gi|321167598|gb|ADW73297.1| sugar isomerase (SIS) [Rahnella sp. Y9602]
          Length = 202

 Score =  143 bits (361), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 52/182 (28%), Positives = 95/182 (52%), Gaps = 3/182 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L +L+  L  ++   +   +  +    G++ +TG+G SG    K+A  LA    P+ 
Sbjct: 18  SQELLALQHHLDADI---WQQLLTLVTGCTGKIAVTGVGTSGIAARKIAHMLACVEQPAV 74

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           ++ A +A+HGDLG +  +DL+I++S  G+S+EL  +L   +   + +I++T    S +A 
Sbjct: 75  YLSATDAAHGDLGFMRSNDLMILISRGGNSEELTRLLPTLKAKGVAIISVTENLDSAIAR 134

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A +V+      E  P  +  TTS ++ LA+ DAL   ++    F +     +HPGG +G
Sbjct: 135 AATLVVKTHIRREIDPLNMLATTSVVLVLAVFDALCGNIMLRNGFDQQSLLKVHPGGNVG 194

Query: 215 TL 216
             
Sbjct: 195 KT 196


>gi|326474915|gb|EGD98924.1| hypothetical protein TESG_06287 [Trichophyton tonsurans CBS 112818]
          Length = 477

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 30/211 (14%)

Query: 24  VQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHI 78
           V  A+  I  E+  L +LE   S           AVE+I        ++++ G+GKSG I
Sbjct: 59  VDTAIHVIATERAALENLERVYSTNELARNNMERAVEQIANTINAGSKLIVCGVGKSGKI 118

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE------------ 126
           G K+ +T+ S G    F+H  EA HGDLGM+   D ++ +++SG + E            
Sbjct: 119 GEKVVATMNSLGIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPPTT 178

Query: 127 -LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQLA 184
            +  I  Y +  S PL+A +S   +++   + I      EPE    G  APT+S  + LA
Sbjct: 179 SVIVITAYKQPSSCPLLAGSSNANTIL-LPSPIH-----EPEEVSFGVCAPTSSTTVALA 232

Query: 185 IGDALAIALLESRNFSE-----NDFYVLHPG 210
           +GDALA+A+    + +        F   HPG
Sbjct: 233 VGDALALAVARRLHTTPGRGPAEVFKGYHPG 263


>gi|164655369|ref|XP_001728814.1| hypothetical protein MGL_3981 [Malassezia globosa CBS 7966]
 gi|159102700|gb|EDP41600.1| hypothetical protein MGL_3981 [Malassezia globosa CBS 7966]
          Length = 244

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 26/222 (11%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA-----IKGRVVITGIG 73
           + N+++  A   ++ E + L  L   LQ         A+E +         G++V  G+G
Sbjct: 18  VTNASLDTARSVLLREAQALHKLAEKLQQN-DQAMRFAIELVLGRSSTLASGKIVTVGVG 76

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILY 132
           KSG +  KLA+TL + GT + F+H  EA HGD+G++  + D ++ LS+SG S E+ A++ 
Sbjct: 77  KSGFVAQKLAATLTALGTQAVFLHPIEALHGDIGILQAECDTVLALSYSGESLEVLALMQ 136

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEP-------------------ESCPHGL 173
             +      I +T+   + +   AD  L                         E  P   
Sbjct: 137 LPQVQRCAKIVMTANEHAQLVRLADAWLDCGCHDPMLKGTDVVLQGGFHTSSIEGWPEIP 196

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
            PTTSAI  +AIGDA  +AL  ++      F+  HPGG LG 
Sbjct: 197 VPTTSAISMMAIGDAFCVALSHAKGVQRQTFHANHPGGNLGK 238


>gi|169333738|ref|ZP_02860931.1| hypothetical protein ANASTE_00122 [Anaerofustis stercorihominis DSM
           17244]
 gi|169259587|gb|EDS73553.1| hypothetical protein ANASTE_00122 [Anaerofustis stercorihominis DSM
           17244]
          Length = 200

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 50/189 (26%), Positives = 89/189 (47%), Gaps = 3/189 (1%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
              +  E   +++L   L  +   +   AVEKI   KG V+  G G S     + A+   
Sbjct: 12  KEMLNREVNAVNNLSKVLDFD---KIDKAVEKIANCKGNVIFAGCGSSSTAAFRAANIYN 68

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
               PS  ++   A HG+ GMI   D+ I +S SG+++EL   +  A++    +I +T  
Sbjct: 69  FLYIPSVAINVMNALHGEYGMIREGDIFIPISKSGNTEELVQSIPIAKKLGAYIIGLTEN 128

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           + S +A ++ I +T     E     +  T+S      I D +  A+++  N ++ DF ++
Sbjct: 129 DNSYIAENSHIAITFNSLKELDDKDMVATSSTTCSSIILDIIGGAVMKKNNITDKDFKLI 188

Query: 208 HPGGKLGTL 216
           HP G +G +
Sbjct: 189 HPNGAVGQM 197


>gi|312216159|emb|CBX96110.1| hypothetical protein [Leptosphaeria maculans]
          Length = 438

 Score =  143 bits (360), Expect = 5e-32,   Method: Composition-based stats.
 Identities = 70/216 (32%), Positives = 106/216 (49%), Gaps = 15/216 (6%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKA---IKGRVVITGIGKS 75
              +  A+  +      LS +    Q +         AVE +       G+++I G+GKS
Sbjct: 207 TRLLSRAVNVLSTAATALSQVTILYQSDHVARDGLLRAVEVLTNVNDAGGKLIICGVGKS 266

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +G K+ +T+ S G  S F+HAAEA HGDLG I + D I+ +S+SG + EL A+L +  
Sbjct: 267 GLVGRKMVATMKSLGIASSFLHAAEALHGDLGDIKKRDAIMFISYSGKTAELMALLPHI- 325

Query: 136 RFSIPLIAITSENKS---VVACHADIVLTLP---KEPESCPHG-LAPTTSAIMQLAIGDA 188
               P++AITS  K     +       + LP    E E    G  APTTS  + +A+GD 
Sbjct: 326 PLHTPILAITSHTKPSDCPLINQRPNAVLLPAPIHELEEVSFGVCAPTTSTTVTIAVGDM 385

Query: 189 LAIALLESRN--FSENDFYVLHPGGKLGTLFVCASD 222
           LA+ + E+ +   +E  F   HPGG +G       +
Sbjct: 386 LALTVAEALHEEETETVFRKNHPGGAIGAKARRIDE 421


>gi|150009487|ref|YP_001304230.1| putative sugar isomerase [Parabacteroides distasonis ATCC 8503]
 gi|262383204|ref|ZP_06076341.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298373896|ref|ZP_06983854.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_19]
 gi|301311696|ref|ZP_07217621.1| arabinose 5-phosphate isomerase [Bacteroides sp. 20_3]
 gi|149937911|gb|ABR44608.1| putative sugar isomerase [Parabacteroides distasonis ATCC 8503]
 gi|262296082|gb|EEY84013.1| conserved hypothetical protein [Bacteroides sp. 2_1_33B]
 gi|298268264|gb|EFI09919.1| arabinose 5-phosphate isomerase [Bacteroides sp. 3_1_19]
 gi|300830256|gb|EFK60901.1| arabinose 5-phosphate isomerase [Bacteroides sp. 20_3]
          Length = 203

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 60/189 (31%), Positives = 105/189 (55%), Gaps = 4/189 (2%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +  E   + ++   +           V+ +  + G+++++G+GK+G I   +A+T +STG
Sbjct: 10  LEQEAEAVRNIP--VTPGYEEAVSLIVKHVHDLGGKLIMSGMGKAGQIALNIATTFSSTG 67

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF--SIPLIAITSEN 148
           TP+FF+H +EA HGDLG++ ++D+++++S SG + EL  ++   R     +  I ITS  
Sbjct: 68  TPAFFLHPSEAQHGDLGIVCKNDIMLLISNSGKTRELVELVDLTRGLVPDMKFIVITSNP 127

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S +A  A++ L      E CP GL PTTS  +   IGD L +  ++  +F+  D+   H
Sbjct: 128 DSPLAAEANVCLLTGAPKEVCPLGLTPTTSTTVMTVIGDILVVGTMKRIHFTNKDYAKRH 187

Query: 209 PGGKLGTLF 217
            GG LG+  
Sbjct: 188 HGGYLGSKS 196


>gi|198277373|ref|ZP_03209904.1| hypothetical protein BACPLE_03585 [Bacteroides plebeius DSM 17135]
 gi|198269871|gb|EDY94141.1| hypothetical protein BACPLE_03585 [Bacteroides plebeius DSM 17135]
          Length = 200

 Score =  142 bits (359), Expect = 6e-32,   Method: Composition-based stats.
 Identities = 61/199 (30%), Positives = 99/199 (49%), Gaps = 4/199 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +  E + + ++   +           VE++    G++V +G+GK+G I   +A+T
Sbjct: 4   SIKDLLQREAQAVLNIP--VTDGYEKAVELIVEQVHEKGGKLVTSGMGKAGQIAMNIATT 61

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS--IPLIA 143
             STG PS F+H +EA HGDLG++ ++DL++++S SG + E+  +   A R +  +  I 
Sbjct: 62  FCSTGIPSVFLHPSEAQHGDLGILQKNDLLLLISNSGKTREIVELTELAARLNPELKKIV 121

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IT    S +A  ADI L      E C  G+ PTTS  +   IGD L +  +    F+  +
Sbjct: 122 ITGNPDSPLAEAADICLATGHPDEVCLLGMTPTTSTTVMTVIGDILVVETMRKTGFTIEE 181

Query: 204 FYVLHPGGKLGTLFVCASD 222
           +   H GG LG      S 
Sbjct: 182 YSKRHHGGYLGERSRALSK 200


>gi|226290825|gb|EEH46279.1| sugar isomerase [Paracoccidioides brasiliensis Pb18]
          Length = 443

 Score =  142 bits (359), Expect = 7e-32,   Method: Composition-based stats.
 Identities = 68/212 (32%), Positives = 102/212 (48%), Gaps = 29/212 (13%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
           +S++  AL  I  E+  L+ LE               AV  I       G++VITG+GKS
Sbjct: 53  SSSISTALHVIATERAALAHLEKIYLTDKLARDSIERAVTTIADTVISGGKLVITGVGKS 112

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G IG K+ +T+ S G  S F+H +EA HGDLG+I  +D ++++++SG + EL  +  Y  
Sbjct: 113 GKIGEKVVATMNSLGVQSTFLHPSEALHGDLGVIKPNDTVLLVTFSGKTPELLRLQPYL- 171

Query: 136 RFSIPLIAITSEN----KSVVACHAD---IVLTLPK-EPESCPHG-LAPTTSAIMQLAIG 186
             ++ +IAIT+        ++AC ++   I+L  P  E E    G  AP TS  + LA  
Sbjct: 172 PTTVSIIAITAHMQPDLCPLLACSSNANSILLASPVHEHEEISFGLPAPMTSTTVALAR- 230

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
                        S   F   HPGG +G    
Sbjct: 231 -------------SAEVFKGFHPGGAIGAASC 249


>gi|238853606|ref|ZP_04643975.1| SIS domain protein [Lactobacillus gasseri 202-4]
 gi|238833750|gb|EEQ26018.1| SIS domain protein [Lactobacillus gasseri 202-4]
          Length = 198

 Score =  141 bits (356), Expect = 1e-31,   Method: Composition-based stats.
 Identities = 55/189 (29%), Positives = 98/189 (51%), Gaps = 3/189 (1%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
              E + +S L +SL  +   +    V+KI + KG +++TG G S     K   TL   G
Sbjct: 10  FDEEGQEISKLANSLATK---EIETLVDKIASCKGNILLTGCGTSAMDAKKATHTLNVVG 66

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
              F+++ ++A HG LG+I+  D++I +S  GS+ EL   +   ++    +I IT   KS
Sbjct: 67  IRGFYLNPSDAVHGSLGVISYKDIVIFISKGGSTKELTDFVSNIQKKKAYIILITENPKS 126

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
           V+   AD+V+ +  + E     +  TTS++  +++ D +A  L++  NF++  F + HP 
Sbjct: 127 VLGRSADLVVKVKVDHEIDEFNMLATTSSLAVISLFDVVACILMKKENFTKKTFLLNHPS 186

Query: 211 GKLGTLFVC 219
           G +G     
Sbjct: 187 GNVGNRLRK 195


>gi|46136863|ref|XP_390123.1| hypothetical protein FG09947.1 [Gibberella zeae PH-1]
          Length = 418

 Score =  141 bits (355), Expect = 2e-31,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 107/209 (51%), Gaps = 14/209 (6%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKI---KAIKGRVVITGIGK 74
           K+  +Q  L  +  E   L +L    + +      F   V+ I   ++  G++V+ G+GK
Sbjct: 65  KDQRLQDGLHVLNTEAVALRNLSRLYETDPVARDGFSQTVQAITRQQSTNGKLVVIGVGK 124

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SGHIG KL +T  S    + F+H  EA HGDLG++  +D ++ +++SG + EL  +L + 
Sbjct: 125 SGHIGQKLVATFKSLAIHAVFLHPTEALHGDLGIVGSNDTLMFITYSGKTQELLLMLPHL 184

Query: 135 RRFSIPLIAITSENKS-----VVACHADIVLTLPK-EPESCPHGL-APTTSAIMQLAIGD 187
              S+P + +TS                I+L  P  EPE    G+ APTTS  + LAIGD
Sbjct: 185 DE-SLPTVLLTSHTTPDTCDFFKHRPNTILLPAPIPEPEKTSFGVSAPTTSTTVALAIGD 243

Query: 188 ALAIALLESRNFS-ENDFYVLHPGGKLGT 215
           A+AI   +  N +  + F   HPGG +G 
Sbjct: 244 AIAITAAKEMNANIASLFAKNHPGGAIGA 272


>gi|310793529|gb|EFQ28990.1| SIS domain-containing protein [Glomerella graminicola M1.001]
          Length = 418

 Score =  140 bits (353), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 65/212 (30%), Positives = 108/212 (50%), Gaps = 14/212 (6%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHC---AVEKIKAIKGRVVITGIGKS 75
              ++ A   +  E   L ++ +  + +      F+    AV + K  KG+++ITG+GKS
Sbjct: 71  QDRLRAATHVLKTEAAALRAVANLYETDPVARDGFNRTVAAVTRHKGEKGKLIITGVGKS 130

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           GHI +KL +T  S    S F++  +A HGDLG+I   D+++ +++SG + EL  +L +  
Sbjct: 131 GHIANKLVATFNSLSIASVFLNPIDALHGDLGIIQEHDILMFITFSGKTSELLGLLPHLD 190

Query: 136 RFSIPLIAITSENKS---VVACHADIVLTLP---KEPESCPHGL-APTTSAIMQLAIGDA 188
           +    L+ +T   +     +       + LP    E E+   G+ APTTS  + LA+GDA
Sbjct: 191 KP-WSLVILTGHTRPDTCELVKLRPDTILLPAPVHESETLSFGVSAPTTSTTVALAVGDA 249

Query: 189 LAIALLESRNFS-ENDFYVLHPGGKLGTLFVC 219
           LAIA  +  + +    F   HPGG +G  F  
Sbjct: 250 LAIAAAQELHPNVAQVFSRNHPGGAIGAAFRK 281


>gi|50308223|ref|XP_454112.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49643247|emb|CAG99199.1| KLLA0E03719p [Kluyveromyces lactis]
          Length = 293

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 58/238 (24%), Positives = 95/238 (39%), Gaps = 27/238 (11%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            ++  E   L   +      L    +  V  ++   G+++  G GKS  I  K  + L S
Sbjct: 10  HALAFEDAALFYYDKDELQNLHQTLNNMVNSLRN-GGKLIFVGCGKSYKIICKTVAMLTS 68

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL-----IA 143
            G P+  +H  EA HGD+G    +D +I  S SG +DE+  +L Y +           IA
Sbjct: 69  MGIPARDLHPIEAMHGDMGCCQPNDSLIFCSTSGETDEVLNLLRYLKAGGSYWEKCIRIA 128

Query: 144 ITSENKSVVACHADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +T    S +A H    + +P     KEP+      APT S  + + + D + I + ++  
Sbjct: 129 VTGNRNSTLATHCQHTIVVPQADRFKEPKFQRGLRAPTISTSLMVTVLDCICIEISKAW- 187

Query: 199 FSEND------FYVLHPGGKLGTLFVCAS---------DVMHSGDSIPLVKIGCPLID 241
           F  +       F   HPGG +G +    +         D         +VK    L +
Sbjct: 188 FGNDPVKREIFFNERHPGGGIGKITSSTNLTQLVRAPTDYQTPQYHSYMVKRNETLTE 245


>gi|240277978|gb|EER41485.1| sugar isomerase [Ajellomyces capsulatus H143]
 gi|325096039|gb|EGC49349.1| sugar isomerase [Ajellomyces capsulatus H88]
          Length = 455

 Score =  140 bits (352), Expect = 4e-31,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE               AV  +       G+++I+G+GKSG I  
Sbjct: 54  TAIHVISTERAALAHLERIYLMDKLAQDSIERAVTTVANAVRSGGKLIISGVGKSGKIAE 113

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG + EL  +  Y    ++P
Sbjct: 114 KVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKTPELLRLKPYL-PATVP 172

Query: 141 LIAITSENKSVV-------ACHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+     +            I+LT P  E E    G  AP TS  + LA+GDALA+
Sbjct: 173 LIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAPMTSTTVALALGDALAL 232

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 233 ATSRKLYNSPDKGPAEVFKGFHPGGAIGA 261


>gi|225557336|gb|EEH05622.1| sugar isomerase [Ajellomyces capsulatus G186AR]
          Length = 455

 Score =  140 bits (352), Expect = 5e-31,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 100/209 (47%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE               AV  +       G+++I+G+GKSG I  
Sbjct: 54  TAIHVISTERAALAHLERIYLMDKLAQDSIERAVTTVANTVRSGGKLIISGVGKSGKIAE 113

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG + EL  +  Y    ++P
Sbjct: 114 KVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKTPELLRLKPYL-PATVP 172

Query: 141 LIAITSENKSVV-------ACHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+     +            I+LT P  E E    G  AP TS  + LA+GDALA+
Sbjct: 173 LIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAPMTSTTVALALGDALAL 232

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 233 ATSRKLYNSPDKGPAEVFKGFHPGGAIGA 261


>gi|320590449|gb|EFX02892.1| sugar isomerase [Grosmannia clavigera kw1407]
          Length = 494

 Score =  139 bits (350), Expect = 6e-31,   Method: Composition-based stats.
 Identities = 76/249 (30%), Positives = 116/249 (46%), Gaps = 30/249 (12%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKAIK-----GRVVITGI 72
            ++ +  A+  +  E   L S+        S +  FH AV+ I   +     G++++ G+
Sbjct: 128 SDARLAGAVHVLATEANALQSVAHLYGSSASARQGFHRAVDAIVHTQTAYPAGKLIVVGV 187

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           GKSGHIG KLA+T  S   P+ FVH  EA HGDLG +  +D ++ +++SG + EL ++L 
Sbjct: 188 GKSGHIGRKLAATFNSLAVPASFVHPTEALHGDLGHVRSNDCLLFITYSGKTQELVSLLP 247

Query: 133 YARRFSIPLIAITSE---------------NKSVVACHADIVL--TLPKEPESCPHGLAP 175
           +    S+PLI +T+                ++S  A    I+L   +P E        AP
Sbjct: 248 HV-DPSLPLILLTAHVPTETCDLVQHRQEFHRSATAVGPTILLPAPIPVEEAVSFGVSAP 306

Query: 176 TTSAIMQLAIGDALAIA----LLESRNFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSI 230
           TTS    LA+GDALAI     L  +     + F   HPGG +G T    A     +    
Sbjct: 307 TTSTTTALAVGDALAIVAGNELHSAVGGVGSVFKRNHPGGAIGETTRTQAGPAAGNDQIR 366

Query: 231 PLVKIGCPL 239
            L   G  +
Sbjct: 367 HLAPPGASI 375


>gi|121699633|ref|XP_001268086.1| sugar isomerase, KpsF/GutQ [Aspergillus clavatus NRRL 1]
 gi|119396228|gb|EAW06660.1| sugar isomerase, KpsF/GutQ [Aspergillus clavatus NRRL 1]
          Length = 438

 Score =  138 bits (349), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 75/232 (32%), Positives = 118/232 (50%), Gaps = 20/232 (8%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKSG 76
           + V  A+  I  E+  L+ LE   Q +         AV +I       G++V+ G+GKSG
Sbjct: 33  AAVTTAIHVISTERAALTHLEQIYQTDRLAQENLARAVSQIVRTVRNGGKLVVCGVGKSG 92

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG + EL  +L +   
Sbjct: 93  KIGQKLEATMNSMGIYSTFLHPTEALHGDLGLIRPHDNLLLISFSGRTPELMLLLPHI-P 151

Query: 137 FSIPLIAITSE----NKSVVACHAD---IVLTLP-KEPESCPHG-LAPTTSAIMQLAIGD 187
            ++P+IA+TS        +++ H+    I+L  P  E E    G  APT+S  + LA+GD
Sbjct: 152 STVPVIALTSHMHPSTCPILSFHSPDMGILLPAPIHEHEEASFGLSAPTSSTTVALALGD 211

Query: 188 ALAIALLESRNFSE-----NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           ALA+A     + +        F   HPGG +G     ++  + +  S+  V 
Sbjct: 212 ALALASARRFHNTPGRGPAEVFRSFHPGGAIGAASAASAAAVLTPSSMSTVS 263


>gi|167946212|ref|ZP_02533286.1| KpsF/GutQ family protein [Endoriftia persephone 'Hot96_1+Hot96_2']
          Length = 120

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 40/120 (33%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLN 281
           MH   +IP V     L  A+  +SEK  G  AVVD  Q+L GI T+GD+ R  ++  ++ 
Sbjct: 1   MHRDQAIPKVAANASLQQALIEMSEKGLGMTAVVDAEQRLIGIFTDGDLRRTLNRPLNIR 60

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              V +VM  +   +  + L   A+Q++ +  I+   VVD   + IG  +  DLLR G++
Sbjct: 61  DTLVSEVMTPHGATVPAEMLAAEALQIMDEKKINGFFVVDAAARLIGAFNMHDLLRAGVV 120


>gi|313900676|ref|ZP_07834169.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312954738|gb|EFR36413.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 203

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 3/190 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAI--KG-RVVITGIGKSGHIGSKLASTLASTGTPS 93
             + L  +++     Q   A   I+    KG R+ +TGIGK  H+    AS L+STGTP+
Sbjct: 14  AEAQLHEAVKAYDMKQLEMAGNLIQEAEQKGCRIHVTGIGKPAHLAGYSASLLSSTGTPA 73

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           +F+   EA HG  G +   D++IV+S SG++ ELK  +   ++    +IA+     S + 
Sbjct: 74  YFLDGTEAVHGSAGQVAEQDVVIVISNSGNTAELKQTVTTLKQNRAVIIAVCGNTDSWLY 133

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
            ++D  L    E E       P  S +++L +  +L++ L   +N +  D+   HPGG L
Sbjct: 134 ANSDAQLYAHVEQEGDRLNKPPRASILVELLVLQSLSVLLQYRKNITGKDYLKWHPGGSL 193

Query: 214 GTLFVCASDV 223
           G         
Sbjct: 194 GERTRREEQQ 203


>gi|82545115|ref|YP_409062.1| isomerase [Shigella boydii Sb227]
 gi|81246526|gb|ABB67234.1| putative isomerase [Shigella boydii Sb227]
 gi|320185288|gb|EFW60063.1| Arabinose 5-phosphate isomerase [Shigella flexneri CDC 796-83]
 gi|332091844|gb|EGI96922.1| SIS domain protein [Shigella boydii 3594-74]
          Length = 158

 Score =  138 bits (348), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 4/157 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +     +    R +  E + +  +  S       +    ++ +++ +G+VV  G+GKSG 
Sbjct: 1   MNNTDLIHLIKRFMRNEHKAVEEVIDS----PLSEVANLIKILQSCQGKVVFIGVGKSGI 56

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           I  KLA+T ASTGTPSFFVH  EA HGDLGM+ +DD++I++S SG + E+ A L   ++ 
Sbjct: 57  IARKLAATFASTGTPSFFVHGTEAVHGDLGMVAKDDVVILISNSGETAEILATLPSLKKM 116

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
              LI+    + S +A   D+ + +P + E+   GL 
Sbjct: 117 GNYLISFIRSHHSSLAISCDLSVEIPVKSEADNLGLV 153


>gi|154274590|ref|XP_001538146.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150414586|gb|EDN09948.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 455

 Score =  138 bits (347), Expect = 1e-30,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 99/209 (47%), Gaps = 20/209 (9%)

Query: 26  CALRSIIAEKRGLSSLESSL--QGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGS 80
            A+  I  E+  L+ LE               AV  +       G+++I+G+GKSG I  
Sbjct: 54  TAIHVISTERAALAHLERIYLMDKLAQDSIERAVTTVANTVRSGGKLIISGVGKSGKIAE 113

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K+ +T+ S G  S F+H  EA HGDLGMI   D ++++++SG + EL  +  Y    ++ 
Sbjct: 114 KVVATMNSLGVQSTFLHPTEALHGDLGMIRPGDAVLLVTFSGKTPELLRLKPYL-PATVQ 172

Query: 141 LIAITSENKSVV-------ACHADIVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALAI 191
           LIAIT+     +            I+LT P  E E    G  AP TS  + LA+GDALA+
Sbjct: 173 LIAITAHESPDLCPLLADSNSPDPILLTAPVHEHEDISFGLPAPMTSTTVALALGDALAL 232

Query: 192 ALLESRNFSE-----NDFYVLHPGGKLGT 215
           A       S        F   HPGG +G 
Sbjct: 233 ATSRKLYNSPDKGPAEVFKGFHPGGAIGA 261


>gi|325520927|gb|EGC99901.1| KpsF/GutQ family protein [Burkholderia sp. TJI49]
          Length = 115

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 57/112 (50%), Positives = 75/112 (66%), Gaps = 4/112 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +  +  A   +  E   + +L   L G+    F  AV  +   +GRVV++GIGKSGHI  
Sbjct: 8   DRALALARDVLDIEADAVRALRDQLDGD----FVQAVALLLGCRGRVVVSGIGKSGHIAR 63

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           K+A+TLASTGTP+FFVH AEASHGDLGM+T DD+ I +S+SG S+EL AIL 
Sbjct: 64  KIAATLASTGTPAFFVHPAEASHGDLGMVTADDVFIGISYSGESEELVAILP 115


>gi|330922589|ref|XP_003299894.1| hypothetical protein PTT_10994 [Pyrenophora teres f. teres 0-1]
 gi|311326224|gb|EFQ92004.1| hypothetical protein PTT_10994 [Pyrenophora teres f. teres 0-1]
          Length = 278

 Score =  137 bits (345), Expect = 2e-30,   Method: Composition-based stats.
 Identities = 66/210 (31%), Positives = 107/210 (50%), Gaps = 15/210 (7%)

Query: 27  ALRSIIAEKRGLSSLE-----SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           A+  +      LS +        +  +   +   A+ K     G+++I G+GKSG +G K
Sbjct: 51  AVNVLSTAATALSQVSLLYQSDDVARDGLLRAVQAITKANEAGGKLIICGVGKSGLVGRK 110

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T+ S G  S F+HAAEA HGDLG I ++D ++ +S+SG + EL A+L +      P+
Sbjct: 111 IEATMKSLGIASSFMHAAEALHGDLGDIRQNDAVLFISYSGKTGELMALLNHIPSH-TPI 169

Query: 142 IAITSENKSV---VACHADIVLTLP---KEPESCPHG-LAPTTSAIMQLAIGDALAIALL 194
           +AITS+ K     +       + LP    E E    G  APTTS  + +A+GD LA+ + 
Sbjct: 170 LAITSQTKPSDCQLLEDRPNAILLPAPIHELEEVSFGVCAPTTSTTVTIAVGDMLALTVA 229

Query: 195 ESRNF--SENDFYVLHPGGKLGTLFVCASD 222
           E+ +   +++ F   HPGG +G        
Sbjct: 230 EALHQEDTKDVFRRNHPGGAIGAKSRRIDK 259


>gi|260685171|ref|YP_003216456.1| putative sugar-phosphate isomerase [Clostridium difficile CD196]
 gi|260688830|ref|YP_003219964.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
 gi|260211334|emb|CBA66946.1| putative sugar-phosphate isomerase [Clostridium difficile CD196]
 gi|260214847|emb|CBE07618.1| putative sugar-phosphate isomerase [Clostridium difficile R20291]
          Length = 207

 Score =  136 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 58/210 (27%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRV 67
           +  +   LM+N+ +   L +I  E      L   +        + A E I   +   GRV
Sbjct: 1   MISRRIHLMENT-LSEFLDNISNE------LSEFIASIDETSINKACELILEAEKNHGRV 53

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
            +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG + EL
Sbjct: 54  HVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGETQEL 113

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           KA L   +     +I ++    S +   +DI L    + E      AP  S + +  +  
Sbjct: 114 KATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETIVLQ 173

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           +L++ L  ++  +   +   HP G LG   
Sbjct: 174 SLSVVLQYAKGLNTQQYLKWHPAGSLGKSI 203


>gi|189201447|ref|XP_001937060.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187984159|gb|EDU49647.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 278

 Score =  136 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 67/210 (31%), Positives = 107/210 (50%), Gaps = 15/210 (7%)

Query: 27  ALRSIIAEKRGLSSLE-----SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           A+  +      LS +        +  +   +   A+ K     G+++I G+GKSG +G K
Sbjct: 51  AVNVLSTAATALSQVSILYQSDDVARDGLLRAVQAITKANEAGGKLIICGVGKSGLVGRK 110

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           + +T+ S G  S FVHAAEA HGDLG I ++D ++ +S+SG + EL A+L +      P+
Sbjct: 111 IEATMKSLGIASSFVHAAEALHGDLGDIRQNDAVLFISYSGKTGELMALLNHIPSH-TPI 169

Query: 142 IAITSENKSV---VACHADIVLTLP---KEPESCPHG-LAPTTSAIMQLAIGDALAIALL 194
           +AITS+ K     +       + LP    E E    G  APTTS  + +A+GD LA+ + 
Sbjct: 170 LAITSQTKPSDCQLLEDRPNAILLPAPIHELEEVSFGVCAPTTSTTVTIAVGDMLALTVA 229

Query: 195 ESRNF--SENDFYVLHPGGKLGTLFVCASD 222
           E+ +   +++ F   HPGG +G        
Sbjct: 230 EALHQDGTKDVFRRNHPGGAIGAKSRRIDK 259


>gi|126701254|ref|YP_001090151.1| putative sugar-phosphate isomerase [Clostridium difficile 630]
 gi|115252691|emb|CAJ70535.1| putative phosphosugar isomerase [Clostridium difficile]
          Length = 207

 Score =  136 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 59/210 (28%), Positives = 97/210 (46%), Gaps = 10/210 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK---GRV 67
           +  +   LM+N+ +   L +I  E      L   +        + A E I   +   GRV
Sbjct: 1   MISRRIHLMENT-LSEFLDNISNE------LSEFIASIDETSINKACELILEAEKNHGRV 53

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
            +TGIGK GH+   ++S L+STGT ++ +H  EA HG  G +   D++I +S SG + EL
Sbjct: 54  HVTGIGKPGHVSGYISSLLSSTGTSAYILHGTEAVHGSSGQVVEGDVVIAISNSGETQEL 113

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           KA L   +     +I ++    S +   +DI L    + E      AP  S + +  I  
Sbjct: 114 KATLKTLKVNGAKIIGVSGNESSFLKNISDIFLFAGVKQEGDCLNKAPRASILAETIILQ 173

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           +L++ L  ++  +   +   HP G LG   
Sbjct: 174 SLSVVLQYAKGLNTQQYLKWHPAGSLGKSI 203


>gi|254977290|ref|ZP_05273762.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-66c26]
 gi|255094620|ref|ZP_05324098.1| putative sugar-phosphate isomerase [Clostridium difficile CIP
           107932]
 gi|255316374|ref|ZP_05357957.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-76w55]
 gi|255519033|ref|ZP_05386709.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-97b34]
 gi|255652217|ref|ZP_05399119.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-37x79]
 gi|306521937|ref|ZP_07408284.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-32g58]
          Length = 199

 Score =  136 bits (344), Expect = 3e-30,   Method: Composition-based stats.
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L   +        + A E I   +   GRV +TGIGK GH+   ++S L+STGT ++ +
Sbjct: 15  ELSEFIASIDETSINKACELILEAEKNHGRVHVTGIGKPGHVSGYISSLLSSTGTSAYIL 74

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H  EA HG  G +   D++I +S SG + ELKA L   +     +I ++    S +   +
Sbjct: 75  HGTEAVHGSSGQVVEGDVVIAISNSGETQELKATLKTLKVNGAKIIGVSGNESSFLKNIS 134

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           DI L    + E      AP  S + +  +  +L++ L  ++  +   +   HP G LG  
Sbjct: 135 DIFLFAGVKQEGDCLNKAPRASILAETIVLQSLSVVLQYAKGLNTQQYLKWHPAGSLGKS 194

Query: 217 F 217
            
Sbjct: 195 I 195


>gi|255102845|ref|ZP_05331822.1| putative sugar-phosphate isomerase [Clostridium difficile
           QCD-63q42]
 gi|255308665|ref|ZP_05352836.1| putative sugar-phosphate isomerase [Clostridium difficile ATCC
           43255]
          Length = 199

 Score =  136 bits (344), Expect = 4e-30,   Method: Composition-based stats.
 Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 3/181 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L   +        + A E I   +   GRV +TGIGK GH+   ++S L+STGT ++ +
Sbjct: 15  ELSEFIASIDETSINKACELILEAEKNHGRVHVTGIGKPGHVSGYISSLLSSTGTSAYIL 74

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H  EA HG  G +   D++I +S SG + ELKA L   +     +I ++    S +   +
Sbjct: 75  HGTEAVHGSSGQVVEGDVVIAISNSGETQELKATLKTLKVNGAKIIGVSGNESSFLKNIS 134

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           DI L    + E      AP  S + +  I  +L++ L  ++  +   +   HP G LG  
Sbjct: 135 DIFLFAGVKQEGDCLNKAPRASILAETIILQSLSVVLQYAKGLNTQQYLKWHPAGSLGKS 194

Query: 217 F 217
            
Sbjct: 195 I 195


>gi|289808981|ref|ZP_06539610.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 128

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 3/125 (2%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             SD+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+ R F  
Sbjct: 5   RVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRMFDM 64

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++H  DLL
Sbjct: 65  GGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVLHMHDLL 123

Query: 337 RFGII 341
           R G++
Sbjct: 124 RAGVV 128


>gi|260942641|ref|XP_002615619.1| hypothetical protein CLUG_04501 [Clavispora lusitaniae ATCC 42720]
 gi|238850909|gb|EEQ40373.1| hypothetical protein CLUG_04501 [Clavispora lusitaniae ATCC 42720]
          Length = 372

 Score =  135 bits (341), Expect = 8e-30,   Method: Composition-based stats.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 16/209 (7%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFH--CAVEKIKAI---KGRVVITGIGKSG 76
           S V+    ++++E+  L++L +     +  Q     A+          G++V  G+GKS 
Sbjct: 12  SAVKSVQSTLVSERDALANLAAQYSENIDCQVELVNALRLFYETHLRGGKIVACGVGKSY 71

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I +K  +TL S    +  +H  EA HGDLG+IT  D +   + SG++ EL A+L +   
Sbjct: 72  KIATKTVATLKSLSISTDILHPTEALHGDLGLITERDCLFFFTASGNTPELLALLPHI-P 130

Query: 137 FSIPLIAITSENKSVVAC----HADIVLTLPKEPESCPHG--LAPTTSAIMQLAIGDALA 190
            S+P++ ++   +S ++      + + + LP   +        APT S  +QL + D++ 
Sbjct: 131 ASVPIVLLSCNRESKLSKSNVVKSLLQIDLPDHLKETTVHGVPAPTVSTTLQLVMADSVV 190

Query: 191 IALLESRNF----SENDFYVLHPGGKLGT 215
           +AL E         +  F + HPGG +G+
Sbjct: 191 LALAEMIENDHIKRKKKFSMKHPGGSIGS 219


>gi|169620064|ref|XP_001803444.1| hypothetical protein SNOG_13233 [Phaeosphaeria nodorum SN15]
 gi|111058440|gb|EAT79560.1| hypothetical protein SNOG_13233 [Phaeosphaeria nodorum SN15]
          Length = 277

 Score =  135 bits (339), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 66/219 (30%), Positives = 105/219 (47%), Gaps = 18/219 (8%)

Query: 21  NSTVQCALRSIIAEKRGLSSL-----ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
              V   +  +      LS +       S+  +   +    V       G+++I G+GKS
Sbjct: 43  TRLVSRGVNVLSTAAAALSQVTLLYESDSVAQDGLLRSVATVTGAVEAGGKLLICGVGKS 102

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +G K+ +T+ S G    F+HAAEA HGDLG I ++D+I+ +S+SG + EL A+L +  
Sbjct: 103 GLVGRKMVATMKSLGIACSFMHAAEALHGDLGDIRKNDVILFISYSGKTAELLALLPHI- 161

Query: 136 RFSIPLIAITSENKS---VVACHADIVLTLP---KEPESCPHG-LAPTTSAIMQLAIGDA 188
               P++AITS  ++    +       + LP    E E    G  APTTS  + +A+GD 
Sbjct: 162 PTRTPIVAITSHKRAEDCPLLQAHPNTVLLPAPIHELEEVSFGVCAPTTSTTVTIAVGDM 221

Query: 189 LAIALLESRNFSE-----NDFYVLHPGGKLGTLFVCASD 222
           LA+ + E+   +E     + F   HPGG +G        
Sbjct: 222 LALTVAEALYENEAEGMKDVFRRNHPGGAIGAKARKIEA 260


>gi|150951409|ref|XP_001387728.2| Polysialic acid capsule expression protein [Scheffersomyces
           stipitis CBS 6054]
 gi|149388570|gb|EAZ63705.2| Polysialic acid capsule expression protein [Pichia stipitis CBS
           6054]
          Length = 388

 Score =  134 bits (338), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 60/230 (26%), Positives = 105/230 (45%), Gaps = 18/230 (7%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIKA----IKGRVVITG 71
           +     +    +++  +   ++ L    Q +         ++  +        G++VI+G
Sbjct: 1   MTTTKALDSVYKTLKFQSDAVAHLHLQYQTDSFSQNNLQESLNILYHTSQVAHGKIVISG 60

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAI 130
           IGKS  I +KL +TL S    S  +H +EA HGDLG+I  D D +++L+ SG++ EL  +
Sbjct: 61  IGKSHKIANKLVATLNSLSIHSSTLHPSEALHGDLGLINEDKDCLVLLTASGNTSELLQL 120

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIV------LTLPKEPESCPHGLAPTTSAIMQLA 184
           L +    SIP+I +T    S ++ H  +       L      E+     APT S  + L 
Sbjct: 121 LPHL-SPSIPIILLTCNRDSKLSNHPQVNSLLYASLPSYLNEETIHGLPAPTVSTTLSLI 179

Query: 185 IGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           + DA  +AL E         +  F + HPGG +G+     +D +++    
Sbjct: 180 LADATILALSEMIEEDVLKRKKQFSMKHPGGSIGSYLSHLNDNLNTTRDS 229


>gi|311992834|ref|YP_004009701.1| hypothetical protein Acj61p084 [Acinetobacter phage Acj61]
 gi|295815123|gb|ADG36049.1| conserved hypothetical protein [Acinetobacter phage Acj61]
          Length = 210

 Score =  134 bits (337), Expect = 2e-29,   Method: Composition-based stats.
 Identities = 59/204 (28%), Positives = 102/204 (50%), Gaps = 10/204 (4%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-----AIKGRVVITGIGKSG 76
             +  AL+ + A+   L  L +++      ++   +E +K       + R++ITG+GK+ 
Sbjct: 2   DNIDLALQVVEAQNDALDHLHTAIALN-GDKYDSMIETLKPVAASNYRRRIMITGVGKNA 60

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR- 135
           ++ +K + T AS G PS +++    SHGD G I  DD++I +S SG +DE++ +  +   
Sbjct: 61  NMAAKASETFASLGIPSMYLNTCHYSHGDAGFIAHDDVVIHVSRSGKTDEMQYMAQHLNK 120

Query: 136 -RFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            R ++  I +           A   +   +P   E   + LAPTTS  + LA+ D + + 
Sbjct: 121 IRPNVLQILLHCNPNLTDEQKAPFDIEFGIPGIVECDDNNLAPTTSTTVLLALLDTIGVI 180

Query: 193 LLESRNFSENDFYVLHPGGKLGTL 216
           L +   F   DFY  HPGG LG +
Sbjct: 181 LSKYVGFKREDFYAYHPGGSLGAM 204


>gi|289618778|emb|CBI54603.1| unnamed protein product [Sordaria macrospora]
          Length = 489

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 72/242 (29%), Positives = 113/242 (46%), Gaps = 18/242 (7%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKI------ 60
            ++      L   S +  A+  +      LS +      +      F+ AV+ I      
Sbjct: 61  PAIAACEEQLAVESRLSGAVHLLNTASTALSCITDLYSSDRVARDGFNRAVDAIVRRQGD 120

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI-TRDDLIIVLS 119
               G++V+ G+GKSGHI  KL +T  S    + F+H  EA HGDLG I +R+D +++++
Sbjct: 121 HGRNGKLVVIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDLGQINSRNDTLLLIT 180

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKS---VVACHADIVLTLP---KEPESCPHGL 173
           +SG + EL  +L +  + S+PLI +TS  +     +       + LP    EPE+   G+
Sbjct: 181 FSGKTPELLLLLPHLDK-SLPLILLTSHTRPETCEIVRQRPDTILLPAPIHEPETKSFGV 239

Query: 174 -APTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            APTTS  + L++GDALA+      + S    F   HPGG +G      S       S  
Sbjct: 240 SAPTTSTTVALSVGDALAMVASHELHPSVSKVFAKNHPGGAIGAALRGNSVSPAPSGSSS 299

Query: 232 LV 233
            V
Sbjct: 300 GV 301


>gi|311992578|ref|YP_004009446.1| hypothetical protein Ac42p084 [Acinetobacter phage Ac42]
 gi|298684361|gb|ADI96322.1| conserved hypothetical protein [Acinetobacter phage Ac42]
          Length = 213

 Score =  132 bits (333), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 12/206 (5%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI-------KGRVVITGIGKS 75
            VQ A   I  + R +++L   L    S ++   ++ I            RVVITG+GK+
Sbjct: 2   LVQNAKAVIEEQIRCMNNLSVFLDEN-SEKYEQMMDSILNTVFGSRMYSNRVVITGVGKN 60

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            ++ +K + T AS G PS +++    +HGD G I   D++I +S SG ++E++ +  + R
Sbjct: 61  ANLAAKASETFASLGVPSLYLNTCHYAHGDAGFIGYSDVVIHVSRSGKTEEMQGMARHLR 120

Query: 136 --RFSIPLIAITSENKSV--VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             R  +  I ++  +     +    D V+ +P   E   + LAPT+S  + LA+ D + I
Sbjct: 121 GIRPEVKQILLSCNDNLPEEMKEPFDFVMNVPGVVECDENKLAPTSSTTVLLALLDTIGI 180

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLF 217
            L +   F+  DF   HPGG LG + 
Sbjct: 181 NLSKEIGFTRQDFLTYHPGGSLGQMI 206


>gi|289809209|ref|ZP_06539838.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 142

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 60/141 (42%), Positives = 86/141 (60%), Gaps = 1/141 (0%)

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           VH AEA HGDLGMI   D+++ +S+SG + EL  I+      S+ L+A+T +  S +   
Sbjct: 1   VHPAEALHGDLGMIESRDVMLFISYSGGAKELDLIIPRLEDKSVALLAMTGKPHSPLGRA 60

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG- 214
           A  VL +  E E+CP  LAPT+S +  L +GDALA+A++++R F+E DF   HP G LG 
Sbjct: 61  AKAVLDISVEREACPMHLAPTSSTVNTLMMGDALAMAVMQARGFNEEDFARSHPAGALGA 120

Query: 215 TLFVCASDVMHSGDSIPLVKI 235
            L      +M  GD+IP V +
Sbjct: 121 RLLNNVHHLMRQGDAIPQVML 141


>gi|85089259|ref|XP_957909.1| hypothetical protein NCU10063 [Neurospora crassa OR74A]
 gi|28919183|gb|EAA28673.1| predicted protein [Neurospora crassa OR74A]
          Length = 538

 Score =  131 bits (331), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 71/224 (31%), Positives = 109/224 (48%), Gaps = 18/224 (8%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKI------ 60
            ++      L   S +  A+  +      LS +      +      FH AV+ I      
Sbjct: 59  PAIAACEEQLAVESRLSGAVHLLNTASTALSCITDLYSSDRVARDGFHRAVDAIVRRQGD 118

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI-TRDDLIIVLS 119
               G++VI G+GKSGHI  KL +T  S    + F+H  EA HGDLG I +R+D +++++
Sbjct: 119 HGRNGKLVIIGVGKSGHIAKKLVATFNSLAIQAVFLHPTEALHGDLGQINSRNDTLMLIT 178

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKS---VVACHADIVLTLP---KEPESCPHGL 173
           +SG + EL  +L +    S+PLI +TS  +     +       + LP    EPE+   G+
Sbjct: 179 FSGKTPELLLLLPHL-DQSLPLILLTSHTRPETCEIVRQRPDTILLPAPIHEPETKSFGV 237

Query: 174 -APTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGT 215
            APTTS  + L++GDALA+      + S    F   HPGG +G 
Sbjct: 238 SAPTTSTTVALSVGDALAMVASHELHPSVSKVFAKNHPGGAIGA 281


>gi|213023976|ref|ZP_03338423.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 121

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 3/122 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--D 279
           D+MH+GD IP V     L DA+  ++ K  G   + DE  K+ GI T+GD+ R F    D
Sbjct: 1   DIMHTGDEIPHVNKHATLRDALLEITRKNLGMTVICDESMKIDGIFTDGDLRRMFDMGGD 60

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L + +VM      +    L   A+ L++  +I+ ++V D  Q  +G++H  DLLR G
Sbjct: 61  MRQLGIAEVMTPGAIRVRPGILAVDALNLMQSRHITSVLVADGDQ-LLGVLHMHDLLRAG 119

Query: 340 II 341
           ++
Sbjct: 120 VV 121


>gi|227878222|ref|ZP_03996194.1| SIS domain protein [Lactobacillus crispatus JV-V01]
 gi|227862186|gb|EEJ69733.1| SIS domain protein [Lactobacillus crispatus JV-V01]
          Length = 198

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 53/195 (27%), Positives = 100/195 (51%), Gaps = 3/195 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
              +     E + +  L +++           VEKIK  KG +++TG G S     K   
Sbjct: 4   DNFIDLFRQEGQEIIKLANTISNN---DVLKLVEKIKNCKGNILLTGCGTSAMDAKKATH 60

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
           TL   G  SF+++ ++A HG LG++   DL+I +S  GS+ EL + +   ++ +  +I I
Sbjct: 61  TLNVIGVRSFYLNPSDAVHGSLGVVDSQDLVIFISKGGSTKELTSFIENIKKKNAYIITI 120

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   +SV+A  A++++ +  + E     +  TTS++  +++ D +A  L++ +NF++ +F
Sbjct: 121 TESPQSVLAKAANMIVKVKVDQEIDEFNMLATTSSLAVISLFDVVACILMKKKNFNKKNF 180

Query: 205 YVLHPGGKLGTLFVC 219
              HP G +G     
Sbjct: 181 LANHPSGDVGERLNK 195


>gi|149237526|ref|XP_001524640.1| hypothetical protein LELG_04612 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146452175|gb|EDK46431.1| hypothetical protein LELG_04612 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 513

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 63/210 (30%), Positives = 101/210 (48%), Gaps = 19/210 (9%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI------KAIKGRVVITGIGK 74
            S++     ++  E   +++L +  Q +  F     ++ I         KG+++I GIGK
Sbjct: 69  QSSLNSITNTLRLENEAVNNLYNQYQTD-EFSITNLLDSIALMFKTYQRKGKIIICGIGK 127

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYY 133
           S  + +KL +TL S    S  +H +EA HGDLGMI    D +I+L+ SG++ EL  +L +
Sbjct: 128 SHKLATKLTATLNSLSISSCNLHPSEALHGDLGMINESLDCLIMLTSSGNTPELLNLLPH 187

Query: 134 ARRFSIPLIAITSENKSVVACHADI-----VLTLPKEPESCPHG-LAPTTSAIMQLAIGD 187
                +P+I +T    S ++    I        LP   E   HG  APT S  + L + D
Sbjct: 188 L-STDLPIILLTCNKVSKLSKSGRIRSLIYAELLPMHNEEAIHGLPAPTVSTTLSLILAD 246

Query: 188 ALAIALLESRN---FSEND-FYVLHPGGKL 213
           ++ +AL E      F     F + HPGG +
Sbjct: 247 SVILALSELIENDLFKRRKLFGLKHPGGSI 276


>gi|255018998|ref|ZP_05291124.1| hypothetical protein LmonF_16906 [Listeria monocytogenes FSL
           F2-515]
          Length = 144

 Score =  131 bits (329), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 39/147 (26%), Positives = 69/147 (46%), Gaps = 3/147 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VEKI    G++V+ G G SG 
Sbjct: 1   MDKQAILNNIHQTWQEEANAISRLPEVTSEE---ALVKTVEKIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              KL  +      P+ F+  ++A HG LG++ ++D++I++S  G++ EL  ++   +  
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTK 117

Query: 138 SIPLIAITSENKSVVACHADIVLTLPK 164
              LI +T    SV+A  ADI   +  
Sbjct: 118 GSTLIGVTENPDSVIAKEADIFFPVSV 144


>gi|294655797|ref|XP_457993.2| DEHA2C07150p [Debaryomyces hansenii CBS767]
 gi|199430613|emb|CAG86051.2| DEHA2C07150p [Debaryomyces hansenii]
          Length = 388

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 63/235 (26%), Positives = 106/235 (45%), Gaps = 16/235 (6%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQ--GELSFQFHCAVEKIKAI---KGRVVITGIGKS 75
              +    +++ ++   +S L       G        ++E +       G+VV++GIGKS
Sbjct: 11  EKALDSVNKTLGSQSEAMSHLVEQYSKSGYSRINLLNSLELLFQSILRGGKVVVSGIGKS 70

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             I SKL +TL S    S  +HA+E  HGDLG+I  +D +I ++ SG++ EL  +L +  
Sbjct: 71  FKISSKLVATLNSLSIQSAALHASEGLHGDLGIIRDNDTLIFVTASGNTPELLQLLPHIP 130

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKE------PESCPHGLAPTTSAIMQLAIGDAL 189
           + SIP+I +T    S ++ H  +   L  +       ES     APT SA + + + DA 
Sbjct: 131 K-SIPIILLTCNRNSKLSNHPQVKSLLYADLPSNLNEESIHGIPAPTVSATLSMVLADAT 189

Query: 190 AIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
            +AL E         +  F + HPGG +G      ++      +  +   G    
Sbjct: 190 ILALSEMLEEDALKRKKLFSMKHPGGSIGADLSHLNENFVKMATGDVASSGRSFS 244


>gi|213859884|ref|ZP_03385588.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 86

 Score =  130 bits (328), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 49/86 (56%), Positives = 65/86 (75%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G+VV+ G+GKSGHIG K+A+T ASTGTPSFFVH  EA+HGDLGM+T  D++I +S SG S
Sbjct: 1   GKVVVMGMGKSGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQDVVIAISNSGES 60

Query: 125 DELKAILYYARRFSIPLIAITSENKS 150
            E+ A++   +R  +PLI IT   +S
Sbjct: 61  SEITALIPVLKRLHVPLICITGRPES 86


>gi|207108430|ref|ZP_03242592.1| polysialic acid capsule expression protein (kpsF) [Helicobacter
           pylori HPKX_438_CA4C1]
          Length = 181

 Score =  129 bits (325), Expect = 6e-28,   Method: Composition-based stats.
 Identities = 63/178 (35%), Positives = 96/178 (53%), Gaps = 2/178 (1%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           + E+CP   APTTS  + LA+GD L   L+ ++NFS+ DF   HPGG LG         +
Sbjct: 2   KKEACPINSAPTTSTTLTLALGDVLMACLMRAKNFSQEDFASFHPGGLLGKKLFVKVKDL 61

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               ++PL+       DA+  +SEKR G   +V+E  +L G++++GD+ R   K ++  S
Sbjct: 62  LQTTNLPLILPSTSFKDALIEMSEKRLGSAILVNETNELVGVLSDGDVRRALLKGVSLES 121

Query: 285 -VEDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V       PK     D LL  A++ L +H I +L+ VDD  K +G++H   LL  G+
Sbjct: 122 EVRHFATLKPKSFKNLDALLLEALEFLERHKIQILVCVDDHNKVLGVLHLHQLLELGL 179


>gi|242777046|ref|XP_002478953.1| sugar isomerase, KpsF/GutQ [Talaromyces stipitatus ATCC 10500]
 gi|218722572|gb|EED21990.1| sugar isomerase, KpsF/GutQ [Talaromyces stipitatus ATCC 10500]
          Length = 444

 Score =  128 bits (323), Expect = 9e-28,   Method: Composition-based stats.
 Identities = 68/207 (32%), Positives = 100/207 (48%), Gaps = 20/207 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLE--SSLQGELSFQFHCAVEKI---KAIKGRVVITGIGKSG 76
             +  AL  I  E+  L+ LE               AV ++       G++V+ G+GKSG
Sbjct: 10  DALSTALHVITTERDALTHLECLYRTNDLAQKNVERAVSQLVHTINRGGKLVVCGVGKSG 69

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            IG KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG + EL  +L +   
Sbjct: 70  KIGRKLEATMNSVGIHSVFLHPTEALHGDLGVIRSIDTLLLISFSGRTAELLLMLPHIPP 129

Query: 137 FSIPLIAITSENK-------SVVACHADIVLTLP--KEPESCPHGLAPTTSAIMQLAIGD 187
            ++P+IAITS          S  +    I+L  P   + ES     APT+S  + LA+GD
Sbjct: 130 -TVPIIAITSHTHPSTCPLLSFNSPDMTILLPAPLHIDEESSFGLSAPTSSTTVALALGD 188

Query: 188 ALAIALLESRNFSE-----NDFYVLHP 209
           ALA+A     +          F   HP
Sbjct: 189 ALALAAAHKLHTLPGQGPAEVFKGYHP 215


>gi|238881335|gb|EEQ44973.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 392

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE-------KIKAIKGRVVITGIGKS 75
           ++     ++  E   +++L +  Q +  F  +  ++        I A  G++VITG+GKS
Sbjct: 13  SLNSVQSTLKYETDAVTNLFNQYQQD-EFAINNIIQSITIMYNTIVANNGKIVITGVGKS 71

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYA 134
             +G KL +TL S    S  +H  EA HGDLG+I ++ D +I+++ SG++ EL  +L + 
Sbjct: 72  YKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMVTSSGNTPELIQLLPHL 131

Query: 135 RRFSIPLIAITSENKSVVACHADIV------LTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
              ++P++ +T    S ++ +  I       L    + E      APT S  + + + DA
Sbjct: 132 -SSNLPILLLTCSKNSKLSQYNQINSLILAELLSCHKEEIIHGIPAPTVSFTLSMMLADA 190

Query: 189 LAIALLESRNF----SENDFYVLHPGGKLGTL 216
           + +AL E         +  F + HPGG +G  
Sbjct: 191 VILALSELIETDSLKRKKLFGLKHPGGSIGAN 222


>gi|68489422|ref|XP_711462.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|68489455|ref|XP_711445.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|46432748|gb|EAK92217.1| potential phosphosugar binding protein [Candida albicans SC5314]
 gi|46432766|gb|EAK92234.1| potential phosphosugar binding protein [Candida albicans SC5314]
          Length = 395

 Score =  128 bits (321), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 58/212 (27%), Positives = 104/212 (49%), Gaps = 20/212 (9%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE-------KIKAIKGRVVITGIGKS 75
           ++     ++  E   +++L +  Q +  F  +  ++        I A  G++VITG+GKS
Sbjct: 13  SLNSVQSTLKYETDAVTNLFNQYQQD-EFAINNIIQSITIMYNTIVANNGKIVITGVGKS 71

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILYYA 134
             +G KL +TL S    S  +H  EA HGDLG+I ++ D +I+++ SG++ EL  +L + 
Sbjct: 72  YKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMVTSSGNTPELIQLLPHL 131

Query: 135 RRFSIPLIAITSENKSVVACHADIV------LTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
              ++P++ +T    S ++ +  I       L    + E      APT S  + + + DA
Sbjct: 132 -SSNLPILLLTCSKNSKLSQYNQINSLILAELLSCHKEEIIHGIPAPTVSFTLSMMLADA 190

Query: 189 LAIALLESRNF----SENDFYVLHPGGKLGTL 216
           + +AL E         +  F + HPGG +G  
Sbjct: 191 VILALSELIETDSLKRKKLFGLKHPGGSIGAN 222


>gi|154302605|ref|XP_001551712.1| hypothetical protein BC1G_09879 [Botryotinia fuckeliana B05.10]
 gi|150855368|gb|EDN30560.1| hypothetical protein BC1G_09879 [Botryotinia fuckeliana B05.10]
          Length = 402

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 96/353 (27%), Positives = 146/353 (41%), Gaps = 57/353 (16%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGE--LSFQFHCAVEKIKAI---KGRVVITGIGKSGHI 78
           +  A+  +  E   LSSL      +      F+ AV+ IK     +G++VI G+GKSG+I
Sbjct: 67  LSRAVHVLSTEATSLSSLTMLYDTDPVARDGFNHAVDAIKRSIGERGKLVICGVGKSGYI 126

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             KL +T+ S    + F+HA EA HGDLG IT+ D I+++S+SG +      L      S
Sbjct: 127 AQKLVATMRSVAIQAVFIHATEAVHGDLGAITKYDTILLVSFSGKTP-ELLELLPHLDPS 185

Query: 139 IPLIAITSENKSV---VACHADIVLTLPK---EPESCPHGL-APTTSAIMQLAIGDALAI 191
           +P+I +T         +       + LP    EPE+   G  APTTS  M +A+GDALA+
Sbjct: 186 LPMIILTGHTHRSNCEIIRRRPKTILLPAPTFEPETVSFGCAAPTTSTTMAIAVGDALAL 245

Query: 192 ALLES-RNFSENDFYVLHPGGKLGTLF---VCASDVMHSGDSIPLVKIGCPLIDAITILS 247
            +           F   HPGG +G  F      SD+      +P      P   A  ++ 
Sbjct: 246 VIAREIHGNISTIFSKYHPGGAIGAAFKPPQKVSDIAICLADMP-DLGNGPNTGADLLIK 304

Query: 248 EK-------RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV---MIKNP--KV 295
                    R G   VV                +   K    L    +   MI +     
Sbjct: 305 AYGSQSGWARCGTDIVVPPRS-----------IKQLGKSDMDLPASSINGLMIPSTRWIT 353

Query: 296 ILEDTLLTVAMQLL------------RQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I  +T +  A + +             ++ I  L V+DD +  IG++   DL+
Sbjct: 354 IPAETEVAAAKE-MYIKSGSEKSCAYSENTI--LAVMDDLE-LIGVLQIGDLV 402


>gi|262276701|ref|ZP_06054496.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
 gi|262225132|gb|EEY75589.1| arabinose 5-phosphate isomerase [alpha proteobacterium HIMB114]
          Length = 165

 Score =  126 bits (317), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 55/163 (33%), Positives = 77/163 (47%), Gaps = 6/163 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              +      I  E   L+ L+ S+       F  A+  I   KG ++  G+GKS  I  
Sbjct: 5   KQLISFGRGIIKEEISALNKLQKSINA----SFSKAINAINKNKGFIIFCGVGKSKLILD 60

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K   T  S G  S+ +  ++ASHG LG I  DDL I+ S SG ++EL  IL  AR     
Sbjct: 61  KTCGTFQSLGISSYVLDPSQASHGSLGNIRSDDLFIIASNSGETNELLPILKLARENKNV 120

Query: 141 LIAITSENKSVVACHADIVLTLP--KEPESCPHGLAPTTSAIM 181
           +I ITS  KS +A H++I +  P  KE         PT+S  +
Sbjct: 121 VIGITSGTKSKLAKHSNIKIFYPNVKEAGDANFKSVPTSSTTV 163


>gi|71016125|ref|XP_758868.1| hypothetical protein UM02721.1 [Ustilago maydis 521]
 gi|46098386|gb|EAK83619.1| hypothetical protein UM02721.1 [Ustilago maydis 521]
          Length = 447

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 45/119 (37%), Positives = 66/119 (55%), Gaps = 6/119 (5%)

Query: 50  SFQFHCAVEKIKAIK-----GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
              F  AV  +         G+VV+TG+GKSG I  KL++T  S GTPS F+H  EA HG
Sbjct: 157 QDGFRQAVRLVMRATTGERGGKVVLTGVGKSGIIAKKLSATFLSLGTPSMFLHPTEALHG 216

Query: 105 DLGMITRD-DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           DLG++T   D++I LS SGSS E+  ++ +      P+IA+  +  S +   +D  +  
Sbjct: 217 DLGLLTPHRDVVIALSHSGSSPEILTLVPHLNARRCPIIALVGKRDSALVKASDAWIDC 275



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 129 AILYYARRFSIPLI--AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             +  ARR ++P        +  S +          P   E+     AP++S  + LA+G
Sbjct: 331 QFMPEARRGTVPQCDSCDCGKQMSRL-KARRNKAPQPNTDEAWDDVPAPSSSTTVALAMG 389

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGT 215
           DALA ++  ++    + F   HPGGKLG 
Sbjct: 390 DALAFSVTRAKGLGRDMFAFNHPGGKLGA 418


>gi|190348754|gb|EDK41274.2| hypothetical protein PGUG_05372 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 371

 Score =  126 bits (317), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 22/232 (9%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAIK---GRVVIT 70
           +  +  + +     ++ ++   LS LE        +      ++E +       G++VI 
Sbjct: 3   YERLSKAALLSVTNTLTSQSEALSHLEKLYRTSNYVQLNLLNSLELMLQTTLKGGKLVIC 62

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKS  IG+K+ +TL S    +  +H +EA HGDLG+I   D +I ++ SG++ EL  +
Sbjct: 63  GIGKSLKIGNKMVATLNSLSIQASSLHPSEALHGDLGIIRDCDCLIFITASGNTPELINL 122

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKE------PESCPHGLAPTTSAIMQLA 184
           L +  + S+P+I +T    S ++    +   L  E       E+     APT S  + LA
Sbjct: 123 LPHIPK-SVPIILLTCSKSSKLSSSPQVKSLLYAELPSHLNEEAIHGLPAPTVSTTLSLA 181

Query: 185 IGDALAIALLESRNFSEND-------FYVLHPGGKLGTLFVCASDVMHSGDS 229
           + DA  +AL E     E+D       F + HPGG +G      ++   +   
Sbjct: 182 LADATVLALSE---ILEDDLLKRKKLFSIKHPGGAIGASLSHLNEFFQAEGQ 230


>gi|258575161|ref|XP_002541762.1| predicted protein [Uncinocarpus reesii 1704]
 gi|237902028|gb|EEP76429.1| predicted protein [Uncinocarpus reesii 1704]
          Length = 464

 Score =  126 bits (316), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 77/212 (36%), Positives = 108/212 (50%), Gaps = 20/212 (9%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGEL--SFQFHCAVEKIK---AIKGRVVITGIGKSGHIG 79
              +  I  EK  L++LE     +         AVE++     I G++VI G+GKSG IG
Sbjct: 57  DTVVHVIATEKAALANLERIYTTDTLSRENMERAVERVARTINIGGKLVICGVGKSGKIG 116

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            KL +T+ S G  S F+H  EA HGDLGMI  +D ++ +++SG + E   +L      ++
Sbjct: 117 EKLVATMNSFGIQSCFLHPTEALHGDLGMIRLNDTLLFITFSGKTSE-LLVLLPHLPPTL 175

Query: 140 PLIAITSE-NKSVVACHAD------IVLTLPK-EPESCPHG-LAPTTSAIMQLAIGDALA 190
           P+IAITS    S  A  +D      I+L  P  E E    G  APTTS  + LA+GDALA
Sbjct: 176 PVIAITSHMQPSSCALLSDSDIRDTILLPAPVHEREEVSFGLPAPTTSTTVALALGDALA 235

Query: 191 IALLESRNFSE-----NDFYVLHPGGKLGTLF 217
           +A+    +          F   HPGG +G  F
Sbjct: 236 LAIARKLHTVPGRGPAEVFKGFHPGGAIGAAF 267


>gi|167765435|ref|ZP_02437548.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
           43183]
 gi|167697063|gb|EDS13642.1| hypothetical protein BACSTE_03825 [Bacteroides stercoris ATCC
           43183]
          Length = 491

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE + G + VVD+   L GI+T  D+   F KD +   +++V
Sbjct: 100 DPVTIKRGSSVADALGLMSEYKIGGIPVVDDEGHLVGIVTNRDLR--FEKD-HNKRIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T L  A Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKDNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 27/61 (44%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               D + + D+I        L  A  IL E +   + VVD+  KL G+IT  DI +   
Sbjct: 150 NKRIDEVMTKDNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITKAKD 209

Query: 278 K 278
           K
Sbjct: 210 K 210


>gi|146412762|ref|XP_001482352.1| hypothetical protein PGUG_05372 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 371

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 22/232 (9%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAIK---GRVVIT 70
           +  +  + +     ++ ++   LS LE        +      ++E +       G++VI 
Sbjct: 3   YERLSKAALLSVTNTLTSQSEALSHLEKLYRTSNYVQLNLLNSLELMLQTTLKGGKLVIC 62

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           GIGKS  IG+K+ +TL S    +  +H +EA HGDLG+I   D +I ++ SG++ EL  +
Sbjct: 63  GIGKSLKIGNKMVATLNSLSIQASSLHPSEALHGDLGIIRDCDCLIFITASGNTPELINL 122

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKE------PESCPHGLAPTTSAIMQLA 184
           L +  + S+P+I +T    S ++    +   L  E       E+     APT S  + LA
Sbjct: 123 LPHIPK-SVPIILLTCSKSSKLSLSPQVKSLLYAELPSHLNEEAIHGLPAPTVSTTLSLA 181

Query: 185 IGDALAIALLESRNFSEND-------FYVLHPGGKLGTLFVCASDVMHSGDS 229
           + DA  +AL E     E+D       F + HPGG +G      ++   +   
Sbjct: 182 LADATVLALSE---ILEDDLLKRKKLFSIKHPGGAIGASLSHLNEFFQAEGQ 230


>gi|255717705|ref|XP_002555133.1| KLTH0G02156p [Lachancea thermotolerans]
 gi|238936517|emb|CAR24696.1| KLTH0G02156p [Lachancea thermotolerans]
          Length = 360

 Score =  126 bits (316), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 65/247 (26%), Positives = 98/247 (39%), Gaps = 24/247 (9%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAIKGR 66
            +  K  SLM    V+     +    R +S +      E   +S   H  V+ +K    +
Sbjct: 32  KMPSKSQSLMGQDGVRTFQDMLYQHARAMSHVSVYYATEEVGVSELLHTLVQVLKK-GSK 90

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +V  G GKS  I  K  + L S G  S ++H +EA HGD+G +   D ++V S SG + E
Sbjct: 91  LVFLGSGKSFKIILKTVAMLTSLGIDSRYLHPSEALHGDMGAVRPGDALVVCSSSGETQE 150

Query: 127 LKAILYYARRFSIPL--IAITSENKSVVACHADIVLTLP-----KEPESCPHGLAPTTSA 179
           L   L +A R   P   + +TS  +S +    D VL +P     +E        +PT S 
Sbjct: 151 LVQFLEHAGRVLEPSVKVLVTSSTQSTLHALVDQVLYVPQPVQFQEKTLQDGLPSPTVST 210

Query: 180 IMQLAIGDALAIALL---------ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            + L + D   +AL            R F    F  +HPGG +G        V       
Sbjct: 211 TLMLTVLDCFCLALTELYFDGDTARRREF----FRKMHPGGGIGKQSQVPVPVPVPVLMP 266

Query: 231 PLVKIGC 237
             +    
Sbjct: 267 MALHKDA 273


>gi|255729294|ref|XP_002549572.1| hypothetical protein CTRG_03869 [Candida tropicalis MYA-3404]
 gi|240132641|gb|EER32198.1| hypothetical protein CTRG_03869 [Candida tropicalis MYA-3404]
          Length = 335

 Score =  125 bits (315), Expect = 7e-27,   Method: Composition-based stats.
 Identities = 67/226 (29%), Positives = 108/226 (47%), Gaps = 18/226 (7%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGE------LSFQFHCAVEKIKAIK 64
           V+R+   L   + +     ++  E   +S+L S  Q +      L          + +  
Sbjct: 2   VSRQISPLAVQNAMDSVQNTLRFENDAVSNLSSQYQNDEYSMNNLIQSISILYNSVVSNN 61

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGS 123
           G++VITG+GKS  +G KL +TL S    +  +H  +A HGDLG+I +D D +I+++ SG+
Sbjct: 62  GKIVITGVGKSYKLGLKLVATLNSLSIHASGLHPTDALHGDLGLINQDKDCLIMVTSSGN 121

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADI-----VLTLPKEPESCPHG-LAPTT 177
           + EL  +L +    ++P+I +T   KS ++ H  I        LP   E   HG  APT 
Sbjct: 122 TPELMELLPHF-STTLPIILLTCSRKSKLSEHNQISSLILAELLPCHKEELIHGIPAPTV 180

Query: 178 SAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVC 219
           S  + L + DA+ +AL E         +  F   HPGG +G     
Sbjct: 181 SFTLSLVLADAVILALSELIEADVTKRKKLFGCKHPGGSIGANLNN 226


>gi|281423986|ref|ZP_06254899.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
 gi|281401911|gb|EFB32742.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris F0302]
          Length = 494

 Score =  125 bits (315), Expect = 8e-27,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTEASMAIAIAREGGIG-----VIHKNMSIEEQAHQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
               ++ G  + DA+ ++ +   G + VVD+  KL GI+T  D+   R   K      ++
Sbjct: 101 DPVTIRRGSTVKDALELMHDYHIGGIPVVDDDNKLVGIVTNRDLRFERRMDK-----KID 155

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VM K N     + T L  A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 156 EVMTKENLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITKAK 209



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L+ A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 ERRMDKKIDEVMTKENLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|241954864|ref|XP_002420153.1| phosphosugar binding protein, putative [Candida dubliniensis CD36]
 gi|223643494|emb|CAX42373.1| phosphosugar binding protein, putative [Candida dubliniensis CD36]
          Length = 383

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 57/224 (25%), Positives = 107/224 (47%), Gaps = 20/224 (8%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE-------KIKAI 63
           +T      + + ++     ++  E   +++L +    +  F  +  ++        I + 
Sbjct: 1   MTNPISQYLTSVSLNSVQTTLKYETDAVTNLFNQYHQD-EFSINNIIQSITIMYNTIISN 59

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSG 122
            G++VITG+GKS  +G KL +TL S    S  +H  EA HGDLG+I ++ D +I+++ SG
Sbjct: 60  NGKIVITGVGKSYKLGLKLVATLNSLSIQSSSLHPTEALHGDLGLIDQNRDCLIMVTSSG 119

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIV------LTLPKEPESCPHGLAPT 176
           ++ EL  +L +    ++P++ +T    S ++ +  I       L    + E      APT
Sbjct: 120 NTPELIQLLPHL-SSNLPILLLTCSRNSKLSQYNQINSLILAELLSCHKEEIIHGIPAPT 178

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTL 216
            S  + + + DA+ +AL E         +  F + HPGG +G  
Sbjct: 179 VSFTLSMMLADAVILALSELIETDSLKRKKLFGLKHPGGSIGAN 222


>gi|126435396|ref|YP_001071087.1| sugar isomerase (SIS) [Mycobacterium sp. JLS]
 gi|126235196|gb|ABN98596.1| sugar isomerase (SIS) [Mycobacterium sp. JLS]
          Length = 214

 Score =  125 bits (314), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   +  E   +S+L  +++G +         ++  + G+VV TG G SG +  +LA  L
Sbjct: 14  AGEVLAREADAVSALAGTVEGGV----VAVARRLLDVTGKVVTTGSGTSGIMAERLAHLL 69

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +  GTP+ ++ A +A HG +G +T  DL++ +S +G S EL  +        + ++AIT 
Sbjct: 70  SVCGTPAVYLPAMDALHGGMGAVTAHDLVLAISKTGRSAELTRLTERLVDRGVDVVAITE 129

Query: 147 ENKSVVACHADIVLTLPKEPES-CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           + KS  A  A  V  LP+ P    P G+    S ++  A GDALA+  +  R  + +D  
Sbjct: 130 DAKSPFALAATQVQALPRTPGDADPGGMIALASTLVVGAWGDALAVVSMTLRGRTLHDVV 189

Query: 206 VLHPGGKLGTLFVC 219
             HP G +G     
Sbjct: 190 HSHPAGGVGARGHR 203


>gi|317504769|ref|ZP_07962728.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
           15606]
 gi|315664100|gb|EFV03808.1| inosine-5'-monophosphate dehydrogenase [Prevotella salivae DSM
           15606]
          Length = 494

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 72/172 (41%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTEASMAIAIAREGGIG-----VIHKNMSIEEQAHQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVD+  KL GI+T  D+    H D     +++V
Sbjct: 101 DPVTIRRGSSVKDALALMHDYHIGGIPVVDDDNKLVGIVTNRDLRFERHMD---KKIDEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T L  A Q+L+++ I  L VVD     +G++ + D+ +  
Sbjct: 158 MTKDNLVTTHQQTDLGAAAQILQENKIEKLPVVDKDNHLVGLITYKDITKAK 209



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + D++        L  A  IL E +   + VVD+   L G+IT  DI 
Sbjct: 147 ERHMDKKIDEVMTKDNLVTTHQQTDLGAAAQILQENKIEKLPVVDKDNHLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|218128450|ref|ZP_03457254.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
 gi|317475724|ref|ZP_07934983.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
           1_2_48FAA]
 gi|217989341|gb|EEC55654.1| hypothetical protein BACEGG_00018 [Bacteroides eggerthii DSM 20697]
 gi|316908107|gb|EFV29802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides eggerthii
           1_2_48FAA]
          Length = 491

 Score =  125 bits (313), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KD +   +++V
Sbjct: 100 DPVTIKRGSSVADALGLMAEYKIGGIPVVDDEGHLVGIVTNRDLR--FEKD-HNKRIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T L  A Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKSNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 26/61 (42%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               D + +  +I        L  A  IL E +   + VVD+  KL G+IT  DI +   
Sbjct: 150 NKRIDEVMTKSNIVTTNQTTDLEAAAQILQEHKIEKLPVVDKDNKLVGLITYKDITKAKD 209

Query: 278 K 278
           K
Sbjct: 210 K 210


>gi|329957340|ref|ZP_08297860.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
           12056]
 gi|328523053|gb|EGF50156.1| inosine-5'-monophosphate dehydrogenase [Bacteroides clarus YIT
           12056]
          Length = 491

 Score =  125 bits (313), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE + G + VVD+   L GI+T  D+   F KD  +  +++V
Sbjct: 100 DPVTIKRGSSVADALDLMSEYKIGGIPVVDDEGYLVGIVTNRDLR--FEKD-RSKRIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T L  A Q+L+++ I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKKNIVTTNQTTDLEAAAQILQEYKIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + +  +I        L  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDRSKRIDEVMTKKNIVTTNQTTDLEAAAQILQEYKIEKLPVVDKDNKLVGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|288924569|ref|ZP_06418506.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae D17]
 gi|315607431|ref|ZP_07882427.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae ATCC
           33574]
 gi|288338356|gb|EFC76705.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae D17]
 gi|315250863|gb|EFU30856.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccae ATCC
           33574]
          Length = 494

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 72/172 (41%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTEAAMAIAIAREGGIG-----VVHKNMTIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ +++E   G + VVDE   L GI+T  D+    H D     +++V
Sbjct: 101 DPVTIRRGSTVKDALGMMAEYHIGGIPVVDEDNHLVGIVTNRDLRFELHLD---KKIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  KN       T L  A Q+L+++ I  L VVD+    +G++ + D+ +  
Sbjct: 158 MTSKNLVTTHLQTDLAAAAQILQENKIEKLPVVDNENHLVGLITYKDITKAK 209


>gi|226940939|ref|YP_002796013.1| Sugar phosphate isomerase (Involved in capsule formation) protein
           [Laribacter hongkongensis HLHK9]
 gi|226715866|gb|ACO75004.1| Sugar phosphate isomerase (Involved in capsule formation) protein
           [Laribacter hongkongensis HLHK9]
          Length = 101

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 35/101 (34%), Positives = 58/101 (57%), Gaps = 3/101 (2%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDT 300
             +S K  G  AVVD G +  GI T+GD+ R   +   D + ++V +VM  +PK I  D 
Sbjct: 1   MEISRKGLGLTAVVDTGGRPLGIFTDGDLRRLIDRGVVDFHHMTVGEVMHVHPKTIASDR 60

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L T A++ + Q+ I+ L+V+D+  +  G ++  DL R G++
Sbjct: 61  LATEAVKEMEQNKINGLLVLDNQGRVEGALNLHDLFRAGVV 101



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F++ D   L   G +    +   +VMH       +       +A+  + + +   + V+D
Sbjct: 24  FTDGDLRRLIDRGVVDFHHMTVGEVMH--VHPKTIASDRLATEAVKEMEQNKINGLLVLD 81

Query: 259 EGQKLKGIITEGDIFRN 275
              +++G +   D+FR 
Sbjct: 82  NQGRVEGALNLHDLFRA 98


>gi|282859613|ref|ZP_06268716.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
           JCVIHMP010]
 gi|282587616|gb|EFB92818.1| inosine-5'-monophosphate dehydrogenase [Prevotella bivia
           JCVIHMP010]
          Length = 494

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESAMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ +++E   G + VVD+   L GI+T  D+   F + L+  S+++V
Sbjct: 101 DPVTIRRGSTVRDALAMMAEYHIGGIPVVDDDNHLVGIVTNRDLR--FERRLDK-SIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T L  A  +L+++ I  L VVD+    +G++ + D+ +  
Sbjct: 158 MTSENLVTTHQKTNLAEAADILQENKIEKLPVVDNNNHLVGLITYKDITKAK 209



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 + D + + +++        L +A  IL E +   + VVD    L G+IT  DI 
Sbjct: 147 ERRLDKSIDEVMTSENLVTTHQKTNLAEAADILQENKIEKLPVVDNNNHLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|212690533|ref|ZP_03298661.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
 gi|237708011|ref|ZP_04538492.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|237725283|ref|ZP_04555764.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D4]
 gi|265754203|ref|ZP_06089392.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
 gi|212666882|gb|EEB27454.1| hypothetical protein BACDOR_00015 [Bacteroides dorei DSM 17855]
 gi|229436549|gb|EEO46626.1| inosine-5'-monophosphate dehydrogenase [Bacteroides dorei
           5_1_36/D4]
 gi|229457997|gb|EEO63718.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 9_1_42FAA]
 gi|263234912|gb|EEZ20467.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_33FAA]
          Length = 491

 Score =  124 bits (312), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KVPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++V
Sbjct: 100 DPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDLR--FEKDMDK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T +  A Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIVTTNQSTDMEAASQILQEHKIEKLPVVDKDGKLVGLITYKDITKAK 208



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMDKRIDEVMTKENIVTTNQSTDMEAASQILQEHKIEKLPVVDKDGKLVGLITYKDIT 205

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 206 KAKDKPMACKDAK 218


>gi|108799755|ref|YP_639952.1| sugar isomerase (SIS) [Mycobacterium sp. MCS]
 gi|119868865|ref|YP_938817.1| sugar isomerase (SIS) [Mycobacterium sp. KMS]
 gi|108770174|gb|ABG08896.1| sugar isomerase (SIS) [Mycobacterium sp. MCS]
 gi|119694954|gb|ABL92027.1| sugar isomerase (SIS) [Mycobacterium sp. KMS]
          Length = 214

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 57/194 (29%), Positives = 96/194 (49%), Gaps = 5/194 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   +  E   +S+L  +++G +         ++  + G+VV TG G SG +  +LA  L
Sbjct: 14  AGEVLAREADAVSALAGTVEGGV----VAVARRLLDVTGKVVTTGSGTSGIMAERLAHLL 69

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
           +  GTP+ ++ A +A HG +G +T  DL++ +S +G S EL  +        + ++AIT 
Sbjct: 70  SVCGTPAVYLPAMDALHGGMGAVTAHDLVLAISKTGRSAELTRLTERLVDRGVDVVAITE 129

Query: 147 ENKSVVACHADIVLTLPKEPES-CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           + +S  A  A  V  LP+ P    P G+    S ++  A GDALA+  +  R  + +D  
Sbjct: 130 DAQSPFALAATQVQALPRTPGDADPGGMIALASTLVVGAWGDALAVVSMALRGHTLHDVV 189

Query: 206 VLHPGGKLGTLFVC 219
             HP G +G     
Sbjct: 190 HSHPAGGVGARGHR 203


>gi|323343305|ref|ZP_08083532.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
           33269]
 gi|323095124|gb|EFZ37698.1| inosine-5'-monophosphate dehydrogenase [Prevotella oralis ATCC
           33269]
          Length = 511

 Score =  124 bits (311), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 63  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 117

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ I+S+   G + VVDE   L GI+T  D+   F + L+   ++DV
Sbjct: 118 DPVTIRRGSTVKDALGIMSDYHIGGIPVVDEDNHLVGIVTNRDLR--FERRLDK-KIDDV 174

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N     + T L  A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 175 MTRENLVTTHQQTDLIAAAQILQKNKIEKLPVVDGNNRLVGLITYKDITKAK 226



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        LI A  IL + +   + VVD   +L G+IT  DI 
Sbjct: 164 ERRLDKKIDDVMTRENLVTTHQQTDLIAAAQILQKNKIEKLPVVDGNNRLVGLITYKDIT 223

Query: 274 RNFHK 278
           +   K
Sbjct: 224 KAKDK 228


>gi|150003021|ref|YP_001297765.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
           8482]
 gi|149931445|gb|ABR38143.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus ATCC
           8482]
          Length = 482

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 36  KVPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 90

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++V
Sbjct: 91  DPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDLR--FEKDMDK-RIDEV 147

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T +  A ++L++H I  L VVD   K +G++ + D+ +  
Sbjct: 148 MTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDITKAK 199



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 137 EKDMDKRIDEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDIT 196

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 197 KAKDKPMACKDAK 209


>gi|120436847|ref|YP_862533.1| IMP dehydrogenase [Gramella forsetii KT0803]
 gi|117578997|emb|CAL67466.1| IMP dehydrogenase [Gramella forsetii KT0803]
          Length = 499

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 55/218 (25%), Positives = 90/218 (41%), Gaps = 28/218 (12%)

Query: 141 LIAITSENKSVV--ACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAI 185
           LIA+T+    ++  A   D VL +P   E  P                 P  SA M    
Sbjct: 7   LIAMTAHESKILGEALTYDDVLLVPAYSEVLPREVSIQSKFTRNIPINVPIVSAAMDTVT 66

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP----LID 241
              +AIA+            VLH    +    +    V  +   + +  +  P    + D
Sbjct: 67  ESRMAIAMAREGGIG-----VLHKNMSIEQQALKVRKVKRAESGMIIDPVTLPISARVRD 121

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDT 300
           A   + E   G + +VDE  KL GI+T  D+   F K+LN   + +VM  +N   + E T
Sbjct: 122 AKESMREHSIGGIPIVDEDGKLLGIVTNRDLR--FEKNLNR-PISEVMTSENLVTVAEGT 178

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A  +L+++ I  L VV+   + +G++ F D+ + 
Sbjct: 179 SLDEAEDILQENKIEKLPVVNKDDRLVGLITFRDITKL 216



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            + +++  V  G  L +A  IL E +   + VV++  +L G+IT  DI +   K +   
Sbjct: 166 MTSENLVTVAEGTSLDEAEDILQENKIEKLPVVNKDDRLVGLITFRDITKLTQKPMANK 224


>gi|325285030|ref|YP_004260820.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
           7489]
 gi|324320484|gb|ADY27949.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga lytica DSM
           7489]
          Length = 490

 Score =  123 bits (310), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +         V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAMAQEGGIG-----VLHKNMTIAEQAAKVRKVKRAESGMII 99

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VDE  KL GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPLNSVVRDAKANMKEYSIGGIPIVDEEGKLIGIVTNRDLR--FEKN-NDRPISEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  KN   + E T L  A  +L+++ I  L VVD+  K +G++ F D+ + 
Sbjct: 157 MTSKNLVTVSEGTSLAQAEDILQENKIEKLPVVDEDNKLVGLITFRDITKL 207


>gi|299142783|ref|ZP_07035912.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
 gi|298575812|gb|EFI47689.1| inosine-5'-monophosphate dehydrogenase [Prevotella oris C735]
          Length = 494

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTEASMAIAIAREGGIG-----VIHKNMSIEEQAHQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
               ++ G  + D + ++ +   G + VVD+  KL GI+T  D+   R   K      ++
Sbjct: 101 DPVTIRRGSTVKDTLELMHDYHIGGIPVVDDDNKLVGIVTNRDLRFERRMDK-----KID 155

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VM K N     + T L  A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 156 EVMTKENLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDITKAK 209



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L+ A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 ERRMDKKIDEVMTKENLVTTHQQTDLVAAAQILQENKIEKLPVVDKNNRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|254883669|ref|ZP_05256379.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294775656|ref|ZP_06741164.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
 gi|319642193|ref|ZP_07996853.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
 gi|254836462|gb|EET16771.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_3_47FAA]
 gi|294450500|gb|EFG18992.1| inosine-5'-monophosphate dehydrogenase [Bacteroides vulgatus PC510]
 gi|317386179|gb|EFV67098.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_40A]
          Length = 491

 Score =  123 bits (309), Expect = 4e-26,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KVPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE R G + VVD+ + L GI+T  D+   F KD++   +++V
Sbjct: 100 DPVTIKRGSTVRDALALMSEYRIGGIPVVDDERYLVGIVTNRDLR--FEKDMDK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T +  A ++L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDITKAK 208



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 29/73 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMDKRIDEVMTKENIVTTNQSTDMEAASRILQEHKIEKLPVVDKEGKLVGLITYKDIT 205

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 206 KAKDKPMACKDAK 218


>gi|260591261|ref|ZP_05856719.1| inosine-5'-monophosphate dehydrogenase [Prevotella veroralis F0319]
 gi|260537126|gb|EEX19743.1| inosine-5'-monophosphate dehydrogenase [Prevotella veroralis F0319]
          Length = 494

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 77/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M      ++AIA+            V+H    +       + V  + + +  
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMTIEDQAHQVAIVKRAENGMIY 100

Query: 233 VKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++DV
Sbjct: 101 DPLTILKGRTVKDALAMMADYHIGGIPVVDEDNHLVGIVTNRDLR--FERHLDKL-IDDV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A Q+L+++ I  L VVD     +G++ + D+ +  
Sbjct: 158 MTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNHLVGLITYKDITKAK 209



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD+   L G+IT  DI 
Sbjct: 147 ERHLDKLIDDVMTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNHLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|311993357|ref|YP_004010222.1| hypothetical protein Acj9p085 [Acinetobacter phage Acj9]
 gi|295917314|gb|ADG59985.1| conserved hypothetical protein [Acinetobacter phage Acj9]
          Length = 211

 Score =  123 bits (308), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 10/204 (4%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK-----AIKGRVVITGIGKSG 76
             +  AL  +  +   L  L +++      +++  +  +K         R+ ITG+GK+ 
Sbjct: 2   DNIDLALAVVQEQNDALDQLYAAIANN-GDKYNDMMLMLKPVAESNYARRIAITGVGKNA 60

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR- 135
           ++ +K + T AS G PS +++    SHGD G I   D++I +S SG +DE++ +  + R 
Sbjct: 61  NMAAKASETFASLGIPSMYLNTCHYSHGDAGFIGHTDVVIHVSRSGKTDEMQYMAKHLRT 120

Query: 136 -RFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            R  +  I +   +       A   +   +P   E   H LAPTTS  + LA+ D + I 
Sbjct: 121 IRPDVKQILLHCNDNLTDEQKAPFDIEFGIPGIVECDQHHLAPTTSTTVLLALLDTIGII 180

Query: 193 LLESRNFSENDFYVLHPGGKLGTL 216
           L     F+  +F   HPGG LG +
Sbjct: 181 LSRHIEFTPPEFLKYHPGGALGAM 204


>gi|213023436|ref|ZP_03337883.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
          Length = 129

 Score =  123 bits (308), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                    +M  GD+IP V +   ++DA+  LS    G VAV DE   +KG+ T+GD+ 
Sbjct: 1   MARVAHKHHLMRQGDAIPQVMLATSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLR 60

Query: 274 RNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R        T  V + M  N   +   +    A +LL +  I+   VVD+  K  G ++ 
Sbjct: 61  RWLVGGGALTTPVSEAMTPNGITLQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINL 120

Query: 333 LDLLRFGII 341
            D  + GII
Sbjct: 121 QDFYQAGII 129


>gi|303236778|ref|ZP_07323357.1| inosine-5'-monophosphate dehydrogenase [Prevotella disiens
           FB035-09AN]
 gi|302482946|gb|EFL45962.1| inosine-5'-monophosphate dehydrogenase [Prevotella disiens
           FB035-09AN]
          Length = 494

 Score =  122 bits (307), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 76/174 (43%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMTIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
               ++ G  + DA+ +++E   G + VVD+ + L GI+T  D+   R F K     +++
Sbjct: 101 DPVTIRRGSTVRDALAMMAEYHIGGIPVVDDEKHLVGIVTNRDLRFERRFDK-----TID 155

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VM   N     + T LT A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 156 EVMTHENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLVGLITYKDITKAK 209



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              F    D + + +++        L  A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 ERRFDKTIDEVMTHENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|261401804|ref|ZP_05987929.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
 gi|269208081|gb|EEZ74536.1| arabinose 5-phosphate isomerase [Neisseria lactamica ATCC 23970]
          Length = 102

 Score =  122 bits (307), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 37/102 (36%), Positives = 59/102 (57%), Gaps = 2/102 (1%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           AI  +SEK  G +AV D   +LKG+ T+GD+ R F +   L  L VE++M   PK I  +
Sbjct: 1   AIVSMSEKGLGMLAVTDAQGRLKGVFTDGDLRRLFQRRDSLAGLQVEEMMHTQPKTISAE 60

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L   A+++++ ++I+ L+V D     IG ++  DLL   I+
Sbjct: 61  RLAAEALKVMQANHINGLLVTDADGVLIGALNMHDLLAARIV 102


>gi|255011714|ref|ZP_05283840.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis 3_1_12]
 gi|313149549|ref|ZP_07811742.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
 gi|313138316|gb|EFR55676.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
          Length = 491

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  +A M       +AIA+           +  +     ++ T+    + ++      
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIGVIHKNMSIKEQAKQVATVKRAENGMI---YDP 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F ++++   +++VM 
Sbjct: 102 VTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDLR--FERNMDK-RIDEVMT 158

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           K N     + T L  A Q+L+ H I  L VVD   K IG+V + D+ +  
Sbjct: 159 KENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDITKAK 208



 Score = 36.0 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL   +   + VVD+  KL G++T  DI 
Sbjct: 146 ERNMDKRIDEVMTKENLVTTNQSTDLEAAAQILQHHKIEKLPVVDKEGKLIGLVTYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|224025972|ref|ZP_03644338.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
           18228]
 gi|224019208|gb|EEF77206.1| hypothetical protein BACCOPRO_02723 [Bacteroides coprophilus DSM
           18228]
          Length = 491

 Score =  122 bits (306), Expect = 9e-26,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  NIPFVTAAMDTVTEAQMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I+SE + G + VVD+   L GI+T  D+   F KD+N   +++V
Sbjct: 100 DPVTIKRGSTVKDALDIMSEYKIGGIPVVDDENYLVGIVTNRDLR--FEKDMNK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T +  A ++L+++ I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTKENIVTTEQGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDITKAK 208



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I   + G  +  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMNKRIDEVMTKENIVTTEQGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|282878159|ref|ZP_06286956.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccalis ATCC
           35310]
 gi|281299737|gb|EFA92109.1| inosine-5'-monophosphate dehydrogenase [Prevotella buccalis ATCC
           35310]
          Length = 494

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
            AP  SA M      A+AIA+            V+H    +       + V         
Sbjct: 46  NAPFVSAAMDTVTESAMAIAIAREGGIG-----VIHKNMSIEEQAHQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++     G + VVDE   L GI+T  D+   F + L+   +++V
Sbjct: 101 DPVTIRRGKTVRDALEMMRSYHIGGIPVVDEDGHLVGIVTNRDLR--FERRLDKA-IDEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   N       T L  A Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 158 MTHENLVTTHARTDLAAAAQILQEHKIEKLPVVDANNKLVGLITYKDITKAK 209



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 A D + + +++        L  A  IL E +   + VVD   KL G+IT  DI 
Sbjct: 147 ERRLDKAIDEVMTHENLVTTHARTDLAAAAQILQEHKIEKLPVVDANNKLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|320582468|gb|EFW96685.1| Polysialic acid capsule expression protein [Pichia angusta DL-1]
          Length = 372

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 62/221 (28%), Positives = 100/221 (45%), Gaps = 18/221 (8%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFH-----CAVEKIKAIKGRVV 68
              S +    V+     + ++ R +S L    +     Q H       +       G+V+
Sbjct: 14  DDTSPLLEDAVRRVDSVLASQNRAISYLVGQYRNSKWSQDHMKTALKILNNSLNQGGKVI 73

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD--DLIIVLSWSGSSDE 126
           ++GIGKS  I SK  +TL S    S  +H +EA HGDLG+I  D  D ++++S SG+S E
Sbjct: 74  VSGIGKSYKIASKTVATLNSLSVHSALLHPSEALHGDLGIIREDHHDSLVIISASGNSPE 133

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIV------LTLPKEPESCPHGLAPTTSAI 180
           L  +L Y    S+P++ +T    S ++ H  +       L      ++     APT S  
Sbjct: 134 LTTLLEYV-PASVPVVLVTCTKVSALSKHPKVKALFYAELPPNVSEKNLYGLQAPTISTT 192

Query: 181 MQLAIGDALAIALLESR----NFSENDFYVLHPGGKLGTLF 217
           + L + D ++IAL E         +  F   HPGG +G  +
Sbjct: 193 ICLTLLDGISIALSELHIKDLEVRQKRFGDRHPGGAIGLHY 233


>gi|307565742|ref|ZP_07628211.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
           21A-A]
 gi|307345568|gb|EFN90936.1| inosine-5'-monophosphate dehydrogenase [Prevotella amnii CRIS
           21A-A]
          Length = 494

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NIPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + +A++I++E   G + VVD+   L GI+T  D+   F + L+  S++ V
Sbjct: 101 DPVTIRRGSTVQEALSIMAEYHIGGIPVVDDDNHLVGIVTNRDLR--FERCLDK-SIDQV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T L+ A ++L+++ I  L VVD     IG++ + D+ +  
Sbjct: 158 MTSENLVTTHQKTNLSEAAEILQENKIEKLPVVDKDNHLIGLITYKDITKAK 209



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 + D + + +++        L +A  IL E +   + VVD+   L G+IT  DI 
Sbjct: 147 ERCLDKSIDQVMTSENLVTTHQKTNLSEAAEILQENKIEKLPVVDKDNHLIGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|288800856|ref|ZP_06406313.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           299 str. F0039]
 gi|288332317|gb|EFC70798.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           299 str. F0039]
          Length = 494

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESAMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ I+SE   G + VVD    L GI+T  D+   F ++L+ L ++DV
Sbjct: 101 HPVTIQRGSKVKDALAIMSEYHIGGIPVVDAHNCLVGIVTNRDLR--FERNLDKL-IDDV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N       T L  A Q+L+++ I  L VVD     +G++ + D+ +  
Sbjct: 158 MTSENLVTTHTQTDLVAAAQILQENKIEKLPVVDAENHLVGLITYKDITKAK 209


>gi|150008997|ref|YP_001303740.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
           ATCC 8503]
 gi|255014828|ref|ZP_05286954.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
 gi|256841002|ref|ZP_05546509.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|262383887|ref|ZP_06077023.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|298375771|ref|ZP_06985727.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|301312047|ref|ZP_07217969.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
 gi|149937421|gb|ABR44118.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides distasonis
           ATCC 8503]
 gi|256736845|gb|EEU50172.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|262294785|gb|EEY82717.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|298266808|gb|EFI08465.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|300830149|gb|EFK60797.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
          Length = 491

 Score =  121 bits (305), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +         V  + + +  
Sbjct: 45  NIPMVSAAMDTVTEAKLAIAIAREGGIG-----VIHKNMTIAEQAKQVQTVKRAENGMIY 99

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA+ +++E + G + VVDEG  L GI+T  D+   F KD+N  S+++V
Sbjct: 100 DPVTITKGKRVADALAMMAEYKIGGIPVVDEGGYLVGIVTNRDLR--FEKDMNR-SIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N  V  + T +  A Q+L++H I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTKENLVVTGQSTDMEAAAQILQEHKIEKLPVVDSHNKLIGLITYKDITKAK 208


>gi|300728337|ref|ZP_07061702.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
 gi|299774402|gb|EFI71029.1| inosine-5'-monophosphate dehydrogenase [Prevotella bryantii B14]
          Length = 494

 Score =  121 bits (304), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NIPFVTAAMDTVTEASMAIAIAREGGIG-----VIHKNMTIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
               ++ G  + DA+ +++E   G + VVDE   L GI+T  D+   R   +      ++
Sbjct: 101 DPVTIQRGRTVKDALDMMAEYHIGGIPVVDEDNHLVGIVTNRDLRFERRMDR-----KID 155

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           DVM K N     + T L  A Q+L+++ I  L VVD     +G++ + D+ +  
Sbjct: 156 DVMTKENLVTTHQQTDLLAAAQILQENKIEKLPVVDAENHLVGLITYKDITKAK 209



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L+ A  IL E +   + VVD    L G+IT  DI 
Sbjct: 147 ERRMDRKIDDVMTKENLVTTHQQTDLLAAAQILQENKIEKLPVVDAENHLVGLITYKDIT 206

Query: 274 RNFHK 278
           +  +K
Sbjct: 207 KAKNK 211


>gi|198276171|ref|ZP_03208702.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
 gi|198270983|gb|EDY95253.1| hypothetical protein BACPLE_02360 [Bacteroides plebeius DSM 17135]
          Length = 491

 Score =  121 bits (304), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAQMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KDLN   +++V
Sbjct: 100 DPVTIKRGSVVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDLR--FEKDLNK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +  A ++L+++ I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTKENIVTTEPGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDITKAK 208



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I   + G  +  A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDLNKRIDEVMTKENIVTTEPGTDMETASKILQENKIEKLPVVDKDGKLIGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|313898564|ref|ZP_07832100.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312956638|gb|EFR38270.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 154

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 3/141 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           S L  +++         A   I   +   GR+ +TGIGK GH+   +AS L+STGT ++ 
Sbjct: 14  SELGKNIEDMDMESIERAAHIIMESEKQGGRIHVTGIGKPGHVAGYIASLLSSTGTSAYE 73

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           +H  EA HG  G + + D++I +S SG + EL+A +         +I+ T   +S +A  
Sbjct: 74  LHGTEAVHGSSGQVKKGDVVIAISNSGETMELEATVQTLIANGAHIISCTGNPQSTLAKQ 133

Query: 156 ADIVLTLPKEPESCPHGLAPT 176
           +++ L    + E       P 
Sbjct: 134 SEVCLVAHVDEEGDALNKPPR 154


>gi|294672823|ref|YP_003573439.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
 gi|294473021|gb|ADE82410.1| inosine-5'-monophosphate dehydrogenase [Prevotella ruminicola 23]
          Length = 493

 Score =  121 bits (303), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESQMAIAIAREGGIG-----VIHKNMSIDNQAREVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +G  +  A+ I+SE   G + VVD+ ++L GI+T  D+   F + L+   VE++
Sbjct: 101 DPITIPLGSTVAQALEIMSEYHIGGIPVVDDDRRLVGIVTNRDLR--FERRLDR-PVEEI 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A Q+L+++ I  L VVD   + IG++ + D+ +  
Sbjct: 158 MSKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLIGLITYKDITKAK 209



 Score = 36.0 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   + + S +++        L  A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 ERRLDRPVEEIMSKENLVTTHQQTDLTAAAQILQENKIEKLPVVDKDNRLIGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|290769657|gb|ADD61437.1| putative protein [uncultured organism]
          Length = 491

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N   +++V
Sbjct: 100 DPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDLR--FEKDMNK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +     IL E R   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMNKRIDEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|160890575|ref|ZP_02071578.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
 gi|317479883|ref|ZP_07939000.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
 gi|156859574|gb|EDO53005.1| hypothetical protein BACUNI_03018 [Bacteroides uniformis ATCC 8492]
 gi|316903957|gb|EFV25794.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 4_1_36]
          Length = 491

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N   +++V
Sbjct: 100 DPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDLR--FEKDMNK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +     IL E R   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMNKRIDEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|270295712|ref|ZP_06201912.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
 gi|270273116|gb|EFA18978.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D20]
          Length = 491

 Score =  120 bits (302), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD+N   +++V
Sbjct: 100 DPVTIKRGSTVADALALMAEYKIGGIPVVDDERYLVGIVTNRDLR--FEKDMNK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +     IL E R   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMNKRIDEVMTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKDNKLVGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|332878101|ref|ZP_08445831.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684063|gb|EGJ56930.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 492

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 46  KVPFVTAAMDTVTEAPMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE   G + VVD+  KL GI+T  D+   F ++ +   +++V
Sbjct: 101 DPVTIKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDLR--FEQNPDR-KIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T L+ A ++L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDITKAK 209



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 EQNPDRKIDEVMTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|330996062|ref|ZP_08319956.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
           YIT 11841]
 gi|329574059|gb|EGG55637.1| inosine-5'-monophosphate dehydrogenase [Paraprevotella xylaniphila
           YIT 11841]
          Length = 492

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 46  KVPFVTAAMDTVTEAPMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ ++SE   G + VVD+  KL GI+T  D+   F ++ +   +++V
Sbjct: 101 DPVTIKRGRTVGDALNMMSEYHIGGIPVVDDENKLVGIVTNRDLR--FEQNPDR-KIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T L+ A ++L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDITKAK 209



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD+  +L G+IT  DI 
Sbjct: 147 EQNPDRKIDEVMTSENLVTTHQQTDLSAAAKILQENKIEKLPVVDKDGRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|288803876|ref|ZP_06409301.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           D18]
 gi|288333641|gb|EFC72091.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           D18]
          Length = 494

 Score =  120 bits (302), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMSIEDQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++DV
Sbjct: 101 DPVTILKGRTVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDLR--FERHLDKL-IDDV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A  +L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTKENLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDITKAK 209



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD   +L G+IT  DI 
Sbjct: 147 ERHLDKLIDDVMTKENLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|302345885|ref|YP_003814238.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           ATCC 25845]
 gi|302150253|gb|ADK96515.1| inosine-5'-monophosphate dehydrogenase [Prevotella melaninogenica
           ATCC 25845]
          Length = 494

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMSIEDQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  + DA+ ++++   G + VVDE   L GI+T  D+   F + L+ L ++DV
Sbjct: 101 DPVTILKGRTVKDALEMMADYHIGGIPVVDEENHLVGIVTNRDLR--FERHLDKL-IDDV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A  +L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTKDNLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDITKAK 209



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + D++        L  A  IL E +   + VVD   +L G+IT  DI 
Sbjct: 147 ERHLDKLIDDVMTKDNLVTTHQQTDLTAAAHILQENKIEKLPVVDRENRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|291279952|ref|YP_003496787.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
           SSM1]
 gi|290754654|dbj|BAI81031.1| cyclic nucleotide binding protein [Deferribacter desulfuricans
           SSM1]
          Length = 640

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/161 (27%), Positives = 63/161 (39%), Gaps = 19/161 (11%)

Query: 196 SRNFSENDFYV-------------LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           +R FS++ F               L P  ++                +   K    + + 
Sbjct: 124 ARYFSKSVFSRIKKLYQEVVKTQVLDPIAQVEAYPFQKKVSEIMSSPVETCKPEATVSEI 183

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDLNTLSVEDVMIKNPKVIL 297
             +++ K  G V V D   KL GIITE D+      R     L     +DVM  NP VI 
Sbjct: 184 ARVMTLKGIGSVLVCDGVGKLLGIITERDLVTKVLAREIGVCLRDTKAKDVMTPNPFVIS 243

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+ +  A   +  H I  L VV +  K +GIV   DLLRF
Sbjct: 244 PDSYMYEAAAFMISHGIRHLPVV-ENGKILGIVTVRDLLRF 283


>gi|260062187|ref|YP_003195267.1| putative inosine-5'-monophosphate dehydrogenase [Robiginitalea
           biformata HTCC2501]
 gi|88783749|gb|EAR14920.1| putative inosine-5'-monophosphate dehydrogenase [Robiginitalea
           biformata HTCC2501]
          Length = 490

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +    +    V  +   + L
Sbjct: 45  NVPIVSAAMDTVTESRMAIAMAREGG-----MGVLHKNMTIEQQALKVRRVKRAESGMIL 99

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  P    + DA   + E   G + +V+ G +L GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPQDAFVRDAKASMKEHSIGGIPIVNGGGELIGIVTNRDLR--FEKN-NDRPISEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N     E T L  A  +L+++ I  L VVDD  + IG++ F D+ + 
Sbjct: 157 MTSENLVTTREGTSLAEAEDILQENKIEKLPVVDDDNRLIGLITFRDITKL 207



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            + +++   + G  L +A  IL E +   + VVD+  +L G+IT  DI +   K +   
Sbjct: 157 MTSENLVTTREGTSLAEAEDILQENKIEKLPVVDDDNRLIGLITFRDITKLTQKPIANK 215


>gi|225849786|ref|YP_002730020.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
 gi|225645461|gb|ACO03647.1| inosine-5'-monophosphate dehydrogenase [Persephonella marina EX-H1]
          Length = 489

 Score =  120 bits (301), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 68/174 (39%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSEND-FYVLHPGGKLGTLFVCASDVM 224
             P  SA M       LAIAL          RN S  D    +    K  +  +      
Sbjct: 43  NIPIVSAAMDTVTEHRLAIALAREGGIGIIHRNMSIEDQMKEVEKVKKAESGMIT----- 97

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   +     + +A+ I++  +   V VVD   KL GI+T  D+ R  HK      
Sbjct: 98  ----EPVTIGPDQTVKEALEIMATYKISGVPVVDSENKLIGILTNRDL-RFLHKKDYRKP 152

Query: 285 VEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V   M K P     E T L  AM +L++H +  L VVDD     G++   D+++
Sbjct: 153 VSQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLPVVDDEGHLKGLITIKDIVK 206



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 6/90 (6%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------N 275
               +   +   K G  L +A+ IL + +   + VVD+   LKG+IT  DI +       
Sbjct: 154 SQFMTKAPLITAKEGTSLEEAMDILQKHKVEKLPVVDDEGHLKGLITIKDIVKRKQYPNA 213

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
              +L  L V   +   P  I   T L  A
Sbjct: 214 CKDELGRLRVGAAVGTGPDTIDRVTALVEA 243


>gi|325300047|ref|YP_004259964.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
           DSM 18170]
 gi|324319600|gb|ADY37491.1| inosine-5'-monophosphate dehydrogenase [Bacteroides salanitronis
           DSM 18170]
          Length = 491

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAQMAIAIAREGGIG-----VIHKNMPIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D++   +++V
Sbjct: 100 DPVTIKRGSTVKDALGIMAEYKIGGIPVVDDENYLVGIVTNRDLR--FERDMSKH-IDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +  A ++L+++ I  L VVD+  K IG++ + D+ +  
Sbjct: 157 MTKENIVTTAPGTDMETASEILQRNKIEKLPVVDENGKLIGLITYKDITKAK 208



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            + ++I     G  +  A  IL   +   + VVDE  KL G+IT  DI +   K
Sbjct: 157 MTKENIVTTAPGTDMETASEILQRNKIEKLPVVDENGKLIGLITYKDITKAKDK 210


>gi|212532977|ref|XP_002146645.1| sugar isomerase, KpsF/GutQ [Penicillium marneffei ATCC 18224]
 gi|210072009|gb|EEA26098.1| sugar isomerase, KpsF/GutQ [Penicillium marneffei ATCC 18224]
          Length = 448

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 63/207 (30%), Positives = 102/207 (49%), Gaps = 20/207 (9%)

Query: 22  STVQCALRSIIAEKRGLSSLES--SLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSG 76
             +   L  +  E+  L+ LE         +     AV ++       G++V+ G+GKSG
Sbjct: 10  DVLSTVLHVMTTERDALTHLEYLYRTNDLAAKNMSRAVNQLVHTIHRGGKLVVCGVGKSG 69

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I  KL +T+ S G  S F+H  EA HGDLG+I   D ++++S+SG + EL  +L +   
Sbjct: 70  KISRKLEATMNSVGIHSVFLHPTEALHGDLGVIRSIDTLLLISFSGRTAELLLMLPHVPP 129

Query: 137 FSIPLIAITSE----NKSVVACHAD-IVLTLPKE---PESCPHG-LAPTTSAIMQLAIGD 187
            ++P+IAITS        +++ ++  + + LP      E    G  APT+S  + LA+GD
Sbjct: 130 -TVPIIAITSHIHPSTCPLLSFNSPDMTILLPAPLHIDEETSFGLSAPTSSTTVALALGD 188

Query: 188 ALAIALLESRNFSE-----NDFYVLHP 209
           ALA+A  +  +          F   HP
Sbjct: 189 ALALATAQKLHNQPGQGPAEVFKGYHP 215


>gi|300122382|emb|CBK22953.2| unnamed protein product [Blastocystis hominis]
          Length = 544

 Score =  120 bits (301), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 49/184 (26%), Positives = 88/184 (47%), Gaps = 5/184 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +L+  L+     QF    E I   +    ++ ++  G +G +G +LA++L S G  S F
Sbjct: 363 ENLKMLLETIDKSQFERVAEMIHTNQQHGHKLFVSAEGSAGAVGLRLAASLTSIGVSSQF 422

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V A E +HGDLG + + D ++++S SG ++++  ++   R+  + ++ +     S +   
Sbjct: 423 VPAIEWNHGDLGHLAKGDCVLLISNSGRNEDVLRLIEPFRKRGVVVLGMCGNKGSPLLHK 482

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           AD  L +P    +      PT S + Q A  +AL   +   RN S +DF   HP   L +
Sbjct: 483 ADAGLFVP--ANTELLNCIPTRSIVSQEAAVNALVSQVCLLRNVSADDFIRNHPSDDLAS 540

Query: 216 LFVC 219
               
Sbjct: 541 AEEK 544


>gi|53715359|ref|YP_101351.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
 gi|60683328|ref|YP_213472.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis NCTC 9343]
 gi|253567248|ref|ZP_04844698.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|265767846|ref|ZP_06095378.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
 gi|52218224|dbj|BAD50817.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
 gi|60494762|emb|CAH09568.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis NCTC 9343]
 gi|251944079|gb|EES84598.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|263252518|gb|EEZ24046.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
 gi|301164817|emb|CBW24377.1| putative inosine-5'-monophosphate dehydrogenase [Bacteroides
           fragilis 638R]
          Length = 491

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 79/170 (46%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  +A M       +AIA+           +  +     ++ T+    + ++      
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIGVIHKNMSIKEQAKQVATVKRAENGMI---YDP 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F ++++   +++VM 
Sbjct: 102 VTIKQGSTVRDALALMAEYKIGGIPVVDDNRYLVGIVTNRDLR--FERNMDK-RIDEVMT 158

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           K N     + T L  A Q+L+ H I  L VVD   K IG+V + D+ +  
Sbjct: 159 KENLVTTNQSTDLEAASQILQYHKIEKLPVVDKEGKLIGLVTYKDITKAK 208


>gi|319900081|ref|YP_004159809.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
           36-108]
 gi|319415112|gb|ADV42223.1| inosine-5'-monophosphate dehydrogenase [Bacteroides helcogenes P
           36-108]
          Length = 491

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KDL+   +++V
Sbjct: 100 DPVTIKRGSTVADALDLMAEYKIGGIPVVDDERYLVGIVTNRDLR--FEKDLSK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMDAVSQILQEHRIEKLPVVDKDNKLVGLITYKDITKAK 208



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I        +     IL E R   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDLSKRIDEVMTKENIITTNPTTDMDAVSQILQEHRIEKLPVVDKDNKLVGLITYKDIT 205

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 206 KAKDKPMACKDAK 218


>gi|270339924|ref|ZP_06006470.2| inosine-5'-monophosphate dehydrogenase [Prevotella bergensis DSM
           17361]
 gi|270333283|gb|EFA44069.1| inosine-5'-monophosphate dehydrogenase [Prevotella bergensis DSM
           17361]
          Length = 549

 Score =  120 bits (300), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 101 NVPFVTAAMDTVTESAMAIAIAREGGIG-----VIHKNMTIDEQARQVAIVKRAENGMIY 155

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+   F + L+  +V++V
Sbjct: 156 DPVTIRRGRTVRDALQMMHDYHIGGIPVVDKDNFLVGIVTNRDLR--FERRLDK-TVDEV 212

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T LT A Q+L++H I  L VVD   + IG++ + D+ +  
Sbjct: 213 MTSENLVTTHQQTDLTAAAQILQEHKIEKLPVVDANNRLIGLITYKDITKAK 264



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD   +L G+IT  DI 
Sbjct: 202 ERRLDKTVDEVMTSENLVTTHQQTDLTAAAQILQEHKIEKLPVVDANNRLIGLITYKDIT 261

Query: 274 RNFHK 278
           +   K
Sbjct: 262 KAKDK 266


>gi|282880883|ref|ZP_06289576.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
           5C-B1]
 gi|281305265|gb|EFA97332.1| inosine-5'-monophosphate dehydrogenase [Prevotella timonensis CRIS
           5C-B1]
          Length = 495

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NVPYVTAAMDTVTESAMAIAIAREGGIG-----VIHKNMSIDEQAHQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+   F + L+  ++++V
Sbjct: 101 DPVTIRRGSTVQDALNMMRDYHIGGIPVVDDENHLVGIVTNRDLR--FERRLDK-TIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N       T L+ A Q+L++H I  L VVD+  K +G++ + D+ +  
Sbjct: 158 MTSENLVTTHVKTNLSDAAQILQEHKIEKLPVVDNQNKLVGLITYKDITKAK 209



 Score = 39.5 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++    +   L DA  IL E +   + VVD   KL G+IT  DI 
Sbjct: 147 ERRLDKTIDEVMTSENLVTTHVKTNLSDAAQILQEHKIEKLPVVDNQNKLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|329962623|ref|ZP_08300571.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
           12057]
 gi|328529654|gb|EGF56552.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fluxus YIT
           12057]
          Length = 491

 Score =  120 bits (300), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+ + L GI+T  D+   F KD++   +++V
Sbjct: 100 DPVTIKRGSTVADALALMAEYKIGGIPVVDDEKYLVGIVTNRDLR--FEKDMDK-RIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKDNIITTNPTTDMEAVSQILQEHRIEKLPVVDKENKLVGLITYKDITKAK 208



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 28/73 (38%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + D+I        +     IL E R   + VVD+  KL G+IT  DI 
Sbjct: 146 EKDMDKRIDEVMTKDNIITTNPTTDMEAVSQILQEHRIEKLPVVDKENKLVGLITYKDIT 205

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 206 KAKDKPMACKDAK 218


>gi|319951912|ref|YP_004163179.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
           14237]
 gi|319420572|gb|ADV47681.1| inosine-5'-monophosphate dehydrogenase [Cellulophaga algicola DSM
           14237]
          Length = 490

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESKMAIAMAQEGGIG-----VLHKNMTIEQQAMKVRKVKRAESGMII 99

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD   KL GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPLNSFVRDAKANMKEFGIGGIPIVDGDGKLIGIVTNRDLR--FEKN-NDRPISEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  KN   + E T L  A  +L+++ I  L VVD   K +G++ F D+ + 
Sbjct: 157 MTTKNLVTVAEGTSLEQAEDILQENKIEKLPVVDKNYKLVGLITFRDITKL 207



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  ++  V  G  L  A  IL E +   + VVD+  KL G+IT  DI +   K +   
Sbjct: 157 MTTKNLVTVAEGTSLEQAEDILQENKIEKLPVVDKNYKLVGLITFRDITKLTQKPIANK 215


>gi|325268745|ref|ZP_08135373.1| inosine-5'-monophosphate dehydrogenase [Prevotella multiformis DSM
           16608]
 gi|324988913|gb|EGC20868.1| inosine-5'-monophosphate dehydrogenase [Prevotella multiformis DSM
           16608]
          Length = 494

 Score =  119 bits (299), Expect = 5e-25,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMTIEDQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++++   G + VVD    L GI+T  D+   F + L+ L +++V
Sbjct: 101 DPVTIRQGRTVKDALDMMADYHIGGIPVVDAENHLVGIVTNRDLR--FERHLDKL-IDEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDITKAK 209



 Score = 36.0 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD   +L G+IT  DI 
Sbjct: 147 ERHLDKLIDEVMTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|325851860|ref|ZP_08171025.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola CRIS
           18C-A]
 gi|327312551|ref|YP_004327988.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola F0289]
 gi|325484702|gb|EGC87615.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola CRIS
           18C-A]
 gi|326944770|gb|AEA20655.1| inosine-5'-monophosphate dehydrogenase [Prevotella denticola F0289]
          Length = 494

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTESSMAIAIAREGGIG-----VIHKNMTIEDQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++++   G + VVD    L GI+T  D+   F + L+ L +++V
Sbjct: 101 DPVTIRQGRTVKDALDMMADYHIGGIPVVDGENHLVGIVTNRDLR--FERHLDKL-IDEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T LT A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDITKAK 209



 Score = 36.0 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++        L  A  IL E +   + VVD   +L G+IT  DI 
Sbjct: 147 ERHLDKLIDEVMTKENLVTTHQQTDLTAAAQILQENKIEKLPVVDRENRLVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|254580447|ref|XP_002496209.1| ZYRO0C13002p [Zygosaccharomyces rouxii]
 gi|238939100|emb|CAR27276.1| ZYRO0C13002p [Zygosaccharomyces rouxii]
          Length = 327

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 56/167 (33%), Positives = 78/167 (46%), Gaps = 15/167 (8%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            +VV+ G GKS  I SK  +TL S G PS  +H  EA HGD+G+I + D ++V S  G +
Sbjct: 76  NKVVLLGCGKSHIIASKAVATLRSVGIPSAILHPTEAMHGDMGLIQQGDALLVCSSGGET 135

Query: 125 DELKAILYYARRFSIPL-------IAITSENKSVVACHADIVLTLPK---EPESCPHGLA 174
           DE+   L YA     PL       I   ++ +S ++   D ++ LP+   E E      A
Sbjct: 136 DEIVQFLKYASSPLAPLPLQNIVKIGACAKPESTISLMCDSLILLPQRYPETEVQEGLKA 195

Query: 175 PTTSAIMQLAIGDALAIALLESR-----NFSENDFYVLHPGGKLGTL 216
           PT S    L   D L I+L E       +     F   HP G +G  
Sbjct: 196 PTLSTTSMLVTLDCLCISLSEMYYDGDLSLRSQIFNASHPSGGIGRS 242


>gi|254574460|ref|XP_002494339.1| hypothetical protein [Pichia pastoris GS115]
 gi|238034138|emb|CAY72160.1| Hypothetical protein PAS_chr4_0890 [Pichia pastoris GS115]
 gi|328353844|emb|CCA40241.1| Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]
           [Pichia pastoris CBS 7435]
          Length = 331

 Score =  119 bits (298), Expect = 7e-25,   Method: Composition-based stats.
 Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 17/205 (8%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKI----KAIKGRVVITGIGKSGHIGSKLASTL 86
           +  + + + +L S  +             I       +G++VI+G+GKS  I +K+++T+
Sbjct: 18  LSNQAQAIGNLNSQYRTSWCLNELKNCLAIMMKSLDKRGKLVISGVGKSHKIATKISATM 77

Query: 87  ASTGTPSFFVHAAEASHGDLGMITR--DDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            S    S  +H  EA HGDLG++    +D +I++S SG + EL ++L Y     I +I +
Sbjct: 78  NSLSLHSAVLHPTEALHGDLGLLREENNDTLILISVSGKTSELISLLSYV-PNDIAVILL 136

Query: 145 TSENKSVVACHADIV------LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES-- 196
           T    S++A    +       L             APT S  + L + D+++IAL E+  
Sbjct: 137 TCTRDSILARDHRVKGVLYAELPYQFSESYLYGLSAPTISTTLCLTLMDSVSIALAEAYI 196

Query: 197 --RNFSENDFYVLHPGGKLGTLFVC 219
             +   +  F   HPGG +G  +  
Sbjct: 197 KDKQLRQRLFGERHPGGVIGEEYSR 221


>gi|260909469|ref|ZP_05916173.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           472 str. F0295]
 gi|260636394|gb|EEX54380.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           472 str. F0295]
          Length = 494

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NIPFVTAAMDTVTEAAMAIAIAREGGIG-----VIHKNMSIEEQAHEVAVVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVD+  +L GI+T  D+     +      +++V
Sbjct: 101 DPVTIRKGRTVKDALAMMHDYHIGGIPVVDDDNRLVGIVTNRDLRF---EHRLDKKIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N  V  + T L  A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKAK 209



 Score = 36.4 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++ +      L  A  IL E +   + VVD   ++ G+IT  DI 
Sbjct: 147 EHRLDKKIDEVMTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|189463688|ref|ZP_03012473.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
           17393]
 gi|189438638|gb|EDV07623.1| hypothetical protein BACINT_00019 [Bacteroides intestinalis DSM
           17393]
          Length = 491

 Score =  119 bits (298), Expect = 8e-25,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E R G + VVD+ + L GI+T  D+   F +D+N   +++V
Sbjct: 100 DPVTIKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDLR--FVRDMNKH-IDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDITKAK 208



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            + ++I        +     IL E R   + VVD+  KL G+IT  DI +   K
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDITKAKDK 210


>gi|157364048|ref|YP_001470815.1| sugar isomerase (SIS) [Thermotoga lettingae TMO]
 gi|157314652|gb|ABV33751.1| sugar isomerase (SIS) [Thermotoga lettingae TMO]
          Length = 210

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 3/184 (1%)

Query: 36  RGLSSLESSLQG-ELSFQFHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTP 92
           R L +LE  ++  +         E IK IK  G+++ T  GK+  I  K   TL S G  
Sbjct: 7   RQLKALEKIVETLDFQKLEELINEMIKTIKNGGKIIATAFGKNVPICEKFVGTLISVGID 66

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S+F+H   A HGDLG+I   D++I+L+ SG ++E   +    ++ +     +T   +  +
Sbjct: 67  SYFLHTNSAIHGDLGVIKEKDIVILLTKSGETEESIYLYKQLQKRNANTYIMTYNKEGTL 126

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A      + L  E E     L P  S I  L +  A+A+ L+E  +   + F + HPGG 
Sbjct: 127 AKLCPKSIILTLEHEGDKWNLIPNNSTIGFLFVLQAVAMELIERLDIELDIFKMNHPGGA 186

Query: 213 LGTL 216
           +G  
Sbjct: 187 IGKK 190


>gi|45199062|ref|NP_986091.1| AFR544Wp [Ashbya gossypii ATCC 10895]
 gi|44985137|gb|AAS53915.1| AFR544Wp [Ashbya gossypii ATCC 10895]
          Length = 337

 Score =  118 bits (297), Expect = 9e-25,   Method: Composition-based stats.
 Identities = 45/138 (32%), Positives = 69/138 (50%), Gaps = 9/138 (6%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++V    GKS  I +K  +T  S G P+  +H  EA HGD+G++   D +++ S SG +D
Sbjct: 99  KLVFVACGKSFRIIAKTVATCHSLGIPAAVLHPTEAMHGDIGIVADGDALLLCSHSGETD 158

Query: 126 ELKAILYYARRFSI----PLIAITSENKSVVACHADIVLTLPKEPE-----SCPHGLAPT 176
           EL  +  Y R   +    PLIA+T +  S +A  A  V+T+ + P            APT
Sbjct: 159 ELLHLAAYLRSARLAPASPLIAVTGDPASTLARRAHHVITVFQPPHLRERVVQDGLNAPT 218

Query: 177 TSAIMQLAIGDALAIALL 194
            +  + L   D L +AL 
Sbjct: 219 IATTLMLLALDCLVLALS 236


>gi|218262310|ref|ZP_03476824.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
           DSM 18315]
 gi|218223461|gb|EEC96111.1| hypothetical protein PRABACTJOHN_02498 [Parabacteroides johnsonii
           DSM 18315]
          Length = 491

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+            V+H    +         V         
Sbjct: 45  NIPMVSAAMDTVTEAKMAIAIAREGGIG-----VIHKNMTIAEQAKQVQSVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  + DA+ ++ E + G + VVDE   L GI+T  D+   F +D+N  SV++V
Sbjct: 100 DPVTITRGKTVGDALGMMKEYKIGGIPVVDESDHLVGIVTNRDLR--FERDMNR-SVDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N  V  + T L  A  +L+QH I  L VVD  ++ +G++ + D+ R  
Sbjct: 157 MTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQKRLVGLITYKDITRAK 208



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 + D + + +++ +      L  A +IL + +   + VVD  ++L G+IT  DI 
Sbjct: 146 ERDMNRSVDEVMTKENLIVADQSTDLEAAASILQQHKIEKLPVVDSQKRLVGLITYKDIT 205

Query: 274 RNFHK 278
           R   K
Sbjct: 206 RAKDK 210


>gi|237756107|ref|ZP_04584682.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237691732|gb|EEP60765.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 488

 Score =  118 bits (297), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 47/174 (27%), Positives = 71/174 (40%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSEND-FYVLHPGGKLGTLFVCASDVM 224
             P  SA M       LAIAL          RN S  D    +    K  +  +      
Sbjct: 42  NIPLVSAAMDTVTEHRLAIALAREGGIGIIHRNMSIEDQMREVEKVKKAESGMIT----- 96

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   V+    + +A+ I+S  +   V VVD+  KL GI+T  D+ R  HK      
Sbjct: 97  ----DPVTVRPNQLVKEALEIMSIYKISGVPVVDDENKLVGILTNRDL-RFIHKKDYEKP 151

Query: 285 VEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M K P     E   L  A+ +L++H +  L VVDD  +  G++   D+++
Sbjct: 152 VYEFMTKAPLVTAKEGITLDEAIDILQKHKVEKLPVVDDEGRLKGLITIKDIVK 205



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +   +   K G  L +AI IL + +   + VVD+  +LKG+IT  DI + 
Sbjct: 155 FMTKAPLVTAKEGITLDEAIDILQKHKVEKLPVVDDEGRLKGLITIKDIVKR 206


>gi|189461625|ref|ZP_03010410.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
 gi|189431655|gb|EDV00640.1| hypothetical protein BACCOP_02284 [Bacteroides coprocola DSM 17136]
          Length = 491

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAQMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E + G + VVD+   L GI+T  D+   F KD+ T  +++V
Sbjct: 100 DPVTIKRGSTVKDALDLMAEYKIGGIPVVDDENYLVGIVTNRDLR--FEKDM-TKRIDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +  A ++L+++ I  L VV    K +G++ + D+ +  
Sbjct: 157 MTKENIVTTEPGTDMETASRILQENKIEKLPVVGKDGKLVGLITYKDITKAK 208


>gi|304382091|ref|ZP_07364602.1| inosine-5'-monophosphate dehydrogenase [Prevotella marshii DSM
           16973]
 gi|304336689|gb|EFM02914.1| inosine-5'-monophosphate dehydrogenase [Prevotella marshii DSM
           16973]
          Length = 494

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+ IA+            V+H    +       + V         
Sbjct: 46  NIPFVTAAMDTVTEAAMGIAIAREGGIG-----VIHKNMSIEDQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
               ++ G  + DA+ +++E   G + VVDE   L GI+T  D+   R F K      ++
Sbjct: 101 DPVTIRCGSTVQDALNLMAEYHIGGIPVVDETGHLAGIVTNRDLRFERRFDK-----KID 155

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +VM K N       T L  A Q+L+++ I  L V+D   + +G++ + D+ +  
Sbjct: 156 EVMTKENLVTTNIQTDLAAAAQILQENKIEKLPVIDKDNRLVGLITYKDITKAK 209


>gi|225848313|ref|YP_002728476.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           azorense Az-Fu1]
 gi|225643808|gb|ACN98858.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium
           azorense Az-Fu1]
          Length = 488

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL            ++H    +         V         
Sbjct: 42  NIPLVSAAMDTVTEHRLAIALAREGGIG-----IIHRNMSIEDQMYEVEKVKKAESGMIT 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + +A+ I+S  +   V VVD+  KL GI+T  D+ R  HK      V + 
Sbjct: 97  DPVTIKPNQTVQEALNIMSIYKISGVPVVDDENKLVGILTNRDL-RFIHKKDYNKPVYEF 155

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     E   L  A+++L++H +  L VVDD     G++   D+++
Sbjct: 156 MTKAPLITAKEGISLDDAIEILQKHKVEKLPVVDDNGVLKGLITIKDIVK 205



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 26/52 (50%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +   +   K G  L DAI IL + +   + VVD+   LKG+IT  DI + 
Sbjct: 155 FMTKAPLITAKEGISLDDAIEILQKHKVEKLPVVDDNGVLKGLITIKDIVKR 206


>gi|332885979|gb|EGK06223.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas mossii DSM
           22836]
          Length = 491

 Score =  118 bits (296), Expect = 1e-24,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIA+            V+H    +         V  + +    
Sbjct: 45  NIPFVSAAMDTVTEAKLAIAIAREGGIG-----VIHKNMSIEAQAQQVRFVKRAENGMIS 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     +  A+ +++E + G + VVD   +L GI+T  D+   F +D+N L ++DV
Sbjct: 100 NPVSILRDKTVGHALAMMAEYKIGGIPVVDTNNRLVGIVTNRDLR--FRRDMNEL-IDDV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     + T L  A  +L+QH I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTKENIITTRQTTDLEAAADILQQHKIEKLPVVDSDNKLIGLITYKDITKAK 208



 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + ++I   +    L  A  IL + +   + VVD   KL G+IT  DI 
Sbjct: 146 RRDMNELIDDVMTKENIITTRQTTDLEAAADILQQHKIEKLPVVDSDNKLIGLITYKDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KAKDK 210


>gi|288929624|ref|ZP_06423468.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           317 str. F0108]
 gi|288329129|gb|EFC67716.1| inosine-5'-monophosphate dehydrogenase [Prevotella sp. oral taxon
           317 str. F0108]
          Length = 494

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 72/172 (41%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      A+AIA+            V+H    +       + V         
Sbjct: 46  NIPFVTAAMDTVTEAAMAIAIAREGGIG-----VIHKNMSIEEQAHEVAVVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVDE   L GI+T  D+     +      +++V
Sbjct: 101 DPVTIRRGRTVKDALDMMRDYHIGGIPVVDEDNCLVGIVTNRDLRF---EHRLDKKIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N  V  + T L  A Q+L+++ I  L VVD   + +G++ + D+ +  
Sbjct: 158 MTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDITKAK 209



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D + + +++ +      L  A  IL E +   + VVD   ++ G+IT  DI 
Sbjct: 147 EHRLDKKIDEVMTSENLVVTHQQTDLAAAAQILQENKIEKLPVVDANNRIVGLITYKDIT 206

Query: 274 RNFHK 278
           +   K
Sbjct: 207 KAKDK 211


>gi|295132735|ref|YP_003583411.1| IMP dehydrogenase [Zunongwangia profunda SM-A87]
 gi|294980750|gb|ADF51215.1| IMP dehydrogenase [Zunongwangia profunda SM-A87]
          Length = 490

 Score =  118 bits (295), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAMAREGGIG-----VLHKNMTMEQQALKVRKVKRAESGMII 99

Query: 233 VKIG----CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA  ++ E   G + +VDE  KL GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPISSTVKDAKDLMKEHSIGGIPIVDEEGKLIGIVTNRDLR--FEKN-NQRPIAEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N   + E T L  A  +L+++ I  L VV+   K +G++ F D+ + 
Sbjct: 157 MTSENLVTVAEGTSLEQAEDILQENKIEKLPVVNKEDKLVGLITFRDITKL 207



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 28/65 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     + + +++  V  G  L  A  IL E +   + VV++  KL G+IT  DI 
Sbjct: 146 EKNNQRPIAEVMTSENLVTVAEGTSLEQAEDILQENKIEKLPVVNKEDKLVGLITFRDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KLTQK 210


>gi|188996741|ref|YP_001930992.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931808|gb|ACD66438.1| inosine-5'-monophosphate dehydrogenase [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 488

 Score =  117 bits (294), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 72/174 (41%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSEND-FYVLHPGGKLGTLFVCASDVM 224
             P  SA M       LAIAL          RN S  D    +    K  +  +      
Sbjct: 42  NIPLVSAAMDTVTEHRLAIALAREGGIGIIHRNMSIEDQMREVEKVKKAESGMIT----- 96

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   ++    + +A+ I+S  +   V VVD+ +KL GI+T  D+ R  HK      
Sbjct: 97  ----DPVTIRPNQSVKEALEIMSIYKISGVPVVDDEKKLVGILTNRDL-RFIHKKDYEKP 151

Query: 285 VEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M K P     E   L  A+ +L++H +  L VVDD  +  G++   D+++
Sbjct: 152 VYEFMTKAPLVTAKEGISLDEAIDILQKHKVEKLPVVDDKGRLKGLITIKDIVK 205



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 27/52 (51%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +   +   K G  L +AI IL + +   + VVD+  +LKG+IT  DI + 
Sbjct: 155 FMTKAPLVTAKEGISLDEAIDILQKHKVEKLPVVDDKGRLKGLITIKDIVKR 206


>gi|260889983|ref|ZP_05901246.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
 gi|260860589|gb|EEX75089.1| arabinose 5-phosphate isomerase [Leptotrichia hofstadii F0254]
          Length = 145

 Score =  117 bits (293), Expect = 3e-24,   Method: Composition-based stats.
 Identities = 52/126 (41%), Positives = 74/126 (58%), Gaps = 6/126 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG--RVV 68
           + +     M+   ++ A      E   L  L+S L  +    F   V  I  +K   +VV
Sbjct: 1   MKKGAELKMEIDILKEAKNVFDIEIAELEKLKSKLGDD----FQKLVRMILELKNNNKVV 56

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +TGIGKSG IG K+ +TLASTGT + F++AAEA HGDLGMI+  D++I +S SG+SDE+ 
Sbjct: 57  VTGIGKSGIIGKKITATLASTGTTAVFINAAEALHGDLGMISDGDVVIAISNSGNSDEVL 116

Query: 129 AILYYA 134
           +IL   
Sbjct: 117 SILAPI 122


>gi|15607007|ref|NP_214389.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
 gi|6016372|sp|O67820|IMDH_AQUAE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|2984252|gb|AAC07779.1| inosine monophosphate dehydrogenase [Aquifex aeolicus VF5]
          Length = 490

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 5/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL           +   P  K                  P+
Sbjct: 44  NIPIVSAAMDTVTEARLAIALAREGGIGI--IHRNLPIKKQAEEVEKVKKSESGMIINPV 101

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            VK    + +A+ I+++ +   V VVDE +KL GI+T  D+ R    +  +  V + M K
Sbjct: 102 TVKPDTRVKEALDIMAKYKISGVPVVDEERKLIGILTNRDL-RFIKPEDYSKPVSEFMTK 160

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            N     E   L  A ++ R++ I  L +VD   K  G++   D+++
Sbjct: 161 ENLITAPEGITLDEAEEIFRKYKIEKLPIVDKEGKIKGLITIKDIVK 207


>gi|322710160|gb|EFZ01735.1| sugar isomerase, KpsF/GutQ [Metarhizium anisopliae ARSEF 23]
          Length = 437

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 89/355 (25%), Positives = 146/355 (41%), Gaps = 44/355 (12%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKA---IKGRVV 68
              S  K S ++  L  +  E   L++L    + + + +  F  AV+ I       G+++
Sbjct: 76  PQESPSKESRLRRGLHVLNTEALALAALTKLYETDSTAREGFDKAVQVITRQALTSGKLI 135

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+GKSGHIG KL +TL S    + F+H  EA HGDLG+I   D ++ +++SG + EL 
Sbjct: 136 VIGVGKSGHIGKKLVATLQSLDIRAVFLHPTEALHGDLGIIDAHDTLLFITFSGKTQELM 195

Query: 129 AILYYARRFSIPLIAITSE----NKSVVACHADIVLT---LPKEPESCPHGLAPTTSAIM 181
            +L +    ++P I +TS         +      +L    +P+  ++     AP+TS   
Sbjct: 196 LMLPHLDD-ALPTILLTSHTHRDTCEFIKRRPRTILLPAPIPESEQASFGVSAPSTSTTA 254

Query: 182 QLAIGDALAIALLES-RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
            LA+GDALAI +     +     F   HPGG +G      +        I +     P +
Sbjct: 255 ALALGDALAITVANEIHHNVSAAFAKNHPGGAIGAAAATTAKPPQILGHICVPIADIPSL 314

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGD------IFRNFHKDLNTLSVEDV------ 288
           + +  LS K  G   +        G I   D        R         +V ++      
Sbjct: 315 EGL-ELSSKATGIDLLRAGFGSKSGWIRMEDKVAAPSRIRKISNTGMNQTVGELPNMFVS 373

Query: 289 ---MIKNPKVILEDTLLTVAMQLLRQHN------ISVL----MVVDDCQKAIGIV 330
              M     V+  DT +  A  ++R         IS +    + V D    IG+V
Sbjct: 374 RHDM----IVMSSDTTIHQAGNMIRTARRDDAEDISCVTESIVCVTDGDNVIGMV 424


>gi|327402944|ref|YP_004343782.1| inosine-5'-monophosphate dehydrogenase [Fluviicola taffensis DSM
           16823]
 gi|327318452|gb|AEA42944.1| inosine-5'-monophosphate dehydrogenase [Fluviicola taffensis DSM
           16823]
          Length = 490

 Score =  116 bits (292), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      +LAIAL +          V+H    +    +    V  S   + L
Sbjct: 45  NTPIVSAAMDTVTEASLAIALAQHGGIG-----VIHKNMTIADQALEVRKVKRSESGMIL 99

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA+ +++E + G + V+DE +KLKGIIT  D+   F K+ ++  V ++
Sbjct: 100 DPVTLSEHAIVSDALNLMAEFKIGGIPVIDENKKLKGIITNRDLR--FEKN-HSRPVREI 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   N     + T L  A ++L++  I  L VVD     IG++ + D+++  
Sbjct: 157 MTTENLITTKDGTSLATAEEILQEKKIEKLPVVDGDNTLIGLITYRDIIKVK 208


>gi|305664831|ref|YP_003861118.1| putative inosine-5'-monophosphate dehydrogenase [Maribacter sp.
           HTCC2170]
 gi|88707953|gb|EAR00192.1| putative inosine-5'-monophosphate dehydrogenase [Maribacter sp.
           HTCC2170]
          Length = 490

 Score =  116 bits (291), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 74/171 (43%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAIAQEGGIG-----VLHKNMTIEQQAMKVRKVKRAESGMII 99

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  P    + DA   + E   G + +VD+  KL GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPSTALVKDAKANMKEFSIGGIPIVDKMGKLIGIVTNRDLR--FEKN-NERPLSEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N   + E T L  A  +L+++ I  L VVD   K +G++ F D+ + 
Sbjct: 157 MTSENLVTVGEGTSLAEAEDILQENKIEKLPVVDANNKLVGLITFRDITKL 207



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            + +++  V  G  L +A  IL E +   + VVD   KL G+IT  DI +   K
Sbjct: 157 MTSENLVTVGEGTSLAEAEDILQENKIEKLPVVDANNKLVGLITFRDITKLTQK 210


>gi|289805435|ref|ZP_06536064.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 110

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKV 295
             ++DA+  LS    G VAV DE   +KG+ T+GD+ R        T  V + M  N   
Sbjct: 5   TSVMDAMLELSRTGLGLVAVCDEQHVVKGVFTDGDLRRWLVGGGALTTPVSEAMTPNGIT 64

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +   +    A +LL +  I+   VVD+  K  G ++  D  + GII
Sbjct: 65  LQAQSRAIDAKELLMKRKITAAPVVDENGKLTGAINLQDFYQAGII 110


>gi|281421756|ref|ZP_06252755.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
 gi|281404251|gb|EFB34931.1| inosine-5'-monophosphate dehydrogenase [Prevotella copri DSM 18205]
          Length = 494

 Score =  116 bits (291), Expect = 5e-24,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M      ++AIA+            V+H    +       + V         
Sbjct: 46  NVPFVTAAMDTVTEASMAIAIAREGGIG-----VIHKNMTIEEQARQVAIVKRAENGMIY 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++ +   G + VVD+   L GI+T  D+    H D     +++V
Sbjct: 101 DPVTIRRGSTVKDALDMMHDYHIGGIPVVDDENHLVGIVTNRDLRFERHMD---KKIDEV 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N       T L  A  +L+++ I  L VVD     +G++ + D+ +  
Sbjct: 158 MTSENLVTTHIQTDLVAAAAILQENKIEKLPVVDSENHLVGLITYKDITKAK 209


>gi|322698322|gb|EFY90093.1| sugar isomerase, KpsF/GutQ [Metarhizium acridum CQMa 102]
          Length = 437

 Score =  115 bits (289), Expect = 8e-24,   Method: Composition-based stats.
 Identities = 68/246 (27%), Positives = 118/246 (47%), Gaps = 14/246 (5%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ--FHCAVEKIKA---IKGRVVIT 70
            S  K + ++  L  +  E   L++L    + + + +  F  AV+ I       G++++ 
Sbjct: 78  ESPSKETRLRRGLHVLNTEALALAALAKLYETDSTAREGFDKAVQVITRQALTSGKLIVI 137

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+GKSGHIG KL +TL S    + F+H  EA HGDLG+I   D ++ +++SG + EL  +
Sbjct: 138 GVGKSGHIGKKLVATLQSLDIRAVFLHPTEALHGDLGIIDAHDTLLFITFSGKTQELMLM 197

Query: 131 LYYARRFSIPLIAITSE----NKSVVACHADIVLT---LPKEPESCPHGLAPTTSAIMQL 183
           L +    ++P I +TS         +      +L    +P+  ++     AP+TS    L
Sbjct: 198 LPHLDD-TLPTILLTSHTHRDTCEFIKRRPRTILLPAPIPESEQASFGVSAPSTSTTAAL 256

Query: 184 AIGDALAIALLES-RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           A+GDALAI +     +     F   HPGG +G      ++       I +     PL++ 
Sbjct: 257 ALGDALAITVANEIHHNVSAAFAKNHPGGAIGAAAAATAESPQILGHICVPIADIPLLEG 316

Query: 243 ITILSE 248
           + + S+
Sbjct: 317 LGLSSK 322


>gi|86132801|ref|ZP_01051393.1| IMP dehydrogenase [Dokdonia donghaensis MED134]
 gi|85816755|gb|EAQ37941.1| IMP dehydrogenase [Dokdonia donghaensis MED134]
          Length = 490

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAIAQEGGIG-----VLHKNMTIDEQAIKVRKVKRAESGMII 99

Query: 233 VKIGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD+  KL GI+T  D+   F KD N   V +V
Sbjct: 100 DPVTLPLKSLVSDAKAAMREHSIGGIPIVDDNGKLIGIVTNRDLR--FEKD-NDRPVSEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N     E T L  A ++L+ H I  L VV      +G++ F D+ + 
Sbjct: 157 MTSENLVTAAEGTSLQQAEEILQNHKIEKLPVVTGDNTLVGLITFRDITKL 207


>gi|149278015|ref|ZP_01884154.1| IMP dehydrogenase/GMP reductase [Pedobacter sp. BAL39]
 gi|149231213|gb|EDM36593.1| IMP dehydrogenase/GMP reductase [Pedobacter sp. BAL39]
          Length = 489

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         +LH    +         V  S   +  
Sbjct: 45  NVPIISAAMDTVTEAGLAIAIAQAGGIG-----MLHKNMPIERQADEVRKVKRSESGMIQ 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I+ + + G + V+D   KL GIIT  D+   F KD+    V +V
Sbjct: 100 DPVTLNADAKVADAFQIMKDFKIGGIPVIDADNKLVGIITNRDLR--FQKDMQR-KVSEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N     E T L  A ++L+ + I  L VVD      G++ F D+ ++ 
Sbjct: 157 MTRENLITAPEGTTLMQAEEILQDYKIEKLPVVDAQGHLAGLITFKDIQKYK 208


>gi|333029341|ref|ZP_08457402.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprosuis DSM
           18011]
 gi|332739938|gb|EGJ70420.1| inosine-5'-monophosphate dehydrogenase [Bacteroides coprosuis DSM
           18011]
          Length = 490

 Score =  115 bits (288), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  NIPFITAAMDTVTESQMAIAIAREGGIG-----VIHKNMSIEAQAKQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  + DA+ ++ E   G + VVDE + L GI+T  D+   F +D++ L V+ V
Sbjct: 100 DPITILQGSTVQDALDLMREYHIGGIPVVDEERNLVGIVTNRDLR--FEQDMDKL-VDVV 156

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K       + T L  A ++L++H I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTKEGLVTTDQSTDLEAAAKILQEHKIEKLPVVDKNNKIIGLLTYKDITKAK 208


>gi|224535972|ref|ZP_03676511.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522427|gb|EEF91532.1| hypothetical protein BACCELL_00836 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 273

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ +++E R G + VVD+ + L GI+T  D+   F +D+N   +++V
Sbjct: 100 DPVTIKRGSTVGDALALMAEYRIGGIPVVDDERYLVGIVTNRDLR--FVRDMNKH-IDEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T +    Q+L++H I  L VVD   K +G++ + D+ +  
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDITKAK 208



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            + ++I        +     IL E R   + VVD+  KL G+IT  DI +   K
Sbjct: 157 MTKENIITTNPTTDMEAVSQILQEHRIEKLPVVDKEGKLVGLITYKDITKAKDK 210


>gi|313204351|ref|YP_004043008.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
           propionicigenes WB4]
 gi|312443667|gb|ADQ80023.1| inosine-5'-monophosphate dehydrogenase [Paludibacter
           propionicigenes WB4]
          Length = 492

 Score =  114 bits (287), Expect = 1e-23,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AI++            V+H    +         V  + +    
Sbjct: 45  KIPIVSAAMDTVTECKMAISIAREGGIG-----VIHKNMTIAEQAKQVEIVKRAENGMIS 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++ G  + DA+ +++E + G + VVDE   L GI+T  D+   F +D++   V+ +
Sbjct: 100 NPVTIRKGATVGDALALMAEYKIGGIPVVDEQGYLVGIVTNRDLR--FQRDMDK-EVDAI 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T L  A  +L+Q  I  L VVD+  K +G++ + D+ +  
Sbjct: 157 MTKENLITTTRSTDLEAAADILQQFKIEKLPVVDENNKLVGLLTYKDITKAK 208


>gi|332829599|gb|EGK02245.1| inosine-5'-monophosphate dehydrogenase [Dysgonomonas gadei ATCC
           BAA-286]
          Length = 491

 Score =  114 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIA+            V+H    +         V  + +    
Sbjct: 45  NIPIVSAAMDTVTEAKLAIAIAREGGIG-----VIHKNMSIEAQAQQVRFVKRAENGMIS 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     +  A+ +++E + G + VVD    L GI+T  D+   F +D+N L ++DV
Sbjct: 100 NPVSILRDKTVGQALAMMAEFKIGGIPVVDANNYLVGIVTNRDLR--FRRDMNQL-IDDV 156

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+      + T L  A  +L+QH I  L VVD   + IG++ + D+ +  
Sbjct: 157 MTKDRIITTRQSTDLEAAADILQQHKIEKLPVVDSENRLIGLITYKDITKAK 208


>gi|212551113|ref|YP_002309430.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
 gi|212549351|dbj|BAG84019.1| IMP dehydrogenase [Candidatus Azobacteroides pseudotrichonymphae
           genomovar. CFP2]
          Length = 491

 Score =  114 bits (287), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIA+            V+H    +         V  + +    
Sbjct: 45  NIPIVSAAMDTVTEAKLAIAIAREGGIG-----VIHKNMSIEEQAKQVRSVKRAENGMIS 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +K    + DA+ ++SE + G + VVD+   L GI+T  D+   F KD   L ++ V
Sbjct: 100 NPISIKRNKTIGDALALMSEYKIGGIPVVDDNNYLVGIVTNRDLR--FRKDTEQL-IDKV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     + T L  A  +L+ + I  L VVD   K IG++ + D+ +  
Sbjct: 157 MTSENLVTTSQSTDLEAAADILQSYKIEKLPVVDIHNKLIGLITYKDITKAK 208


>gi|91215283|ref|ZP_01252255.1| putative inosine-5'-monophosphate dehydrogenase [Psychroflexus
           torquis ATCC 700755]
 gi|91186888|gb|EAS73259.1| putative inosine-5'-monophosphate dehydrogenase [Psychroflexus
           torquis ATCC 700755]
          Length = 488

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 82/213 (38%), Gaps = 26/213 (12%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALA 190
           +T      +    D VL +P   +  P                 P  SA M       +A
Sbjct: 1   MTHSKVKGLGFTYDDVLLVPAYSDVLPRTVSIESKFTRNISLNVPIVSAAMDTVTESRMA 60

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG----CPLIDAITIL 246
           IA+            VLH    +    +    V  +   + +  +       + DA   +
Sbjct: 61  IAIAREGGIG-----VLHKNMTIEQQALKVRRVKRAESGMIIDPVTLPITATVKDANDSM 115

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVA 305
            E   G + +VD+ +KL GI+T  D+     +  N   +++VM  KN   + E T L  A
Sbjct: 116 REHSIGGIPIVDDSKKLIGIVTNRDLRF---EQKNDRPIKEVMTTKNLVTVSEGTSLKEA 172

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +L++H I  L V++   + +G++ F D+ + 
Sbjct: 173 EVILQKHKIEKLPVINKNNELVGLITFRDITKL 205



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  ++  V  G  L +A  IL + +   + V+++  +L G+IT  DI +   K     
Sbjct: 155 MTTKNLVTVSEGTSLKEAEVILQKHKIEKLPVINKNNELVGLITFRDITKLTQKPFANK 213


>gi|126663581|ref|ZP_01734578.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteria
           bacterium BAL38]
 gi|126624529|gb|EAZ95220.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteria
           bacterium BAL38]
          Length = 490

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++AIA+ +          VLH    +         V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESSMAIAMAQEGGIG-----VLHKNMTIEQQAAKVKKVKRAESGMII 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +   + DA   + E   G + VVDE   LKGI+T  D+   F K +NT S+ +V
Sbjct: 100 DPVTLPLTATVGDAKMAMKEFSIGGIPVVDENGILKGIVTNRDLR--FEK-VNTRSILEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +      + T L  A  +L+++ I  L VVD+  K +G++ F D+ + 
Sbjct: 157 MTSEKLVTAAQGTTLQEAEGILQENKIEKLPVVDNNNKLVGLITFRDITKL 207



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 23/49 (46%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            G  L +A  IL E +   + VVD   KL G+IT  DI +   K +   
Sbjct: 167 QGTTLQEAEGILQENKIEKLPVVDNNNKLVGLITFRDITKLTQKPIANK 215


>gi|89890444|ref|ZP_01201954.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           BBFL7]
 gi|89517359|gb|EAS20016.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           BBFL7]
          Length = 491

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+ +          +LH    +         V  +   + +
Sbjct: 45  NAPVISAAMDTVTESRMAIAMAQEGGIG-----ILHKNMSIEAQAQKVRRVKRAESGMII 99

Query: 233 VKI----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA   + E   G + +VD+   +KGI+T  D+   F KD N  SV DV
Sbjct: 100 DPVTLTIEATIGDAKASMREHSIGGIPIVDDEGFIKGIVTNRDLR--FEKD-NNRSVTDV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A  +L+++ I  L+VVDD  K +G++ F D+ + 
Sbjct: 157 MTSENLITAKAGTSLHDAEAILQEYKIEKLLVVDDQDKLVGLITFRDITKL 207


>gi|124028007|ref|YP_001013327.1| hypothetical protein Hbut_1145 [Hyperthermus butylicus DSM 5456]
 gi|123978701|gb|ABM80982.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 153

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
              ++   K    ++DA   +++   G V VVD+   + GI+TEGDI R       D + 
Sbjct: 18  MTPNVITCKPDDTVVDAARKMAKYSIGSVVVVDDKGTILGILTEGDIVRRVVARGLDPSR 77

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V DVM  NP  I  D  L  A + +++  I  L VV++  + +GI+   D++R 
Sbjct: 78  TLVRDVMTTNPVTIYSDATLAAAAEYMKRKGIGHLPVVNEQGRLVGIITKTDIVRL 133



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + DVM  N      D  +  A + + +++I  ++VVDD    +GI+   D++R
Sbjct: 11  ELKISDVMTPNVITCKPDDTVVDAARKMAKYSIGSVVVVDDKGTILGILTEGDIVR 66


>gi|152991023|ref|YP_001356745.1| inosine 5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
 gi|151422884|dbj|BAF70388.1| inosine-5'-monophosphate dehydrogenase [Nitratiruptor sp. SB155-2]
          Length = 481

 Score =  114 bits (286), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + +       V  S      
Sbjct: 40  NIPLVSAAMDTVTEHRAAIAMARLGGIG-----IIHKNMDIASQVAEIKRVKKSESGVIM 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  I+SE R   V VVDE   L GI+T  D+   F KD +   V +V
Sbjct: 95  DPIFIHPDATIGEAEKIMSEYRISGVPVVDEDMHLLGILTNRDLR--FEKDFSK-KVSEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K P         L  A + + +H I  L ++D   +  G+V   D+ + 
Sbjct: 152 MTKMPLVTAKPGITLEEAAEKMNEHKIEKLPIIDAEGRLKGLVTIKDIKKK 202



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 47/123 (38%), Gaps = 17/123 (13%)

Query: 221 SDVMHSGDSIPLVKIGCPL-IDAITILSEKR-------FGCVAVVDEGQKLKGIITEGDI 272
            +V         V +  PL   A+  ++E R        G + ++ +           DI
Sbjct: 25  KEVSVKTMLTRNVPLNIPLVSAAMDTVTEHRAAIAMARLGGIGIIHKNM---------DI 75

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +       E  +I +P  I  D  +  A +++ ++ IS + VVD+    +GI+  
Sbjct: 76  ASQVAEIKRVKKSESGVIMDPIFIHPDATIGEAEKIMSEYRISGVPVVDEDMHLLGILTN 135

Query: 333 LDL 335
            DL
Sbjct: 136 RDL 138



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              F      + +   +   K G  L +A   ++E +   + ++D   +LKG++T  DI 
Sbjct: 141 EKDFSKKVSEVMTKMPLVTAKPGITLEEAAEKMNEHKIEKLPIIDAEGRLKGLVTIKDIK 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KKIE 204


>gi|256425885|ref|YP_003126538.1| inosine-5'-monophosphate dehydrogenase [Chitinophaga pinensis DSM
           2588]
 gi|256040793|gb|ACU64337.1| inosine-5'-monophosphate dehydrogenase [Chitinophaga pinensis DSM
           2588]
          Length = 490

 Score =  114 bits (285), Expect = 2e-23,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 71/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI+L            +LH    +         V  S + + L
Sbjct: 47  NIPMVSAAMDTVTEANLAISLARQGGIG-----ILHKNMSIEKQAELVRKVKRSENGLIL 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++ E   G + +VD   KL GI+T  D+   F ++   L V +V
Sbjct: 102 DPVTLHANATIGEALRLMKENSIGGIPIVDANSKLVGILTNRDLR--FERNHKRL-VSEV 158

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   N     E T L  A ++L+Q+ I  L VV    K +G++ + D+L+
Sbjct: 159 MTTENLITAPEGTDLKKAEKILQQNKIEKLPVVAKNGKLVGLITYRDILQ 208


>gi|258649204|ref|ZP_05736673.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
           51259]
 gi|260850469|gb|EEX70338.1| inosine-5'-monophosphate dehydrogenase [Prevotella tannerae ATCC
           51259]
          Length = 493

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 71/172 (41%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 47  QIPFVTAAMDTVTEAPMAIAVAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  +  A+ ++ E   G + VVD+   L GI+T  D+   F  +L+   VEDV
Sbjct: 102 DPVTIHRGSTVRGALQLMHEYHIGGIPVVDDDMHLVGIVTNRDLR--FEHNLDQ-KVEDV 158

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K +     + T L  A ++L+++ I  L V+D   K +G++ + D+ +  
Sbjct: 159 MTKEHLVTTTQQTDLQGAARILKENKIEKLPVIDKDGKLVGLITYKDITKAK 210



 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   + + + + +        L  A  IL E +   + V+D+  KL G+IT  DI 
Sbjct: 148 EHNLDQKVEDVMTKEHLVTTTQQTDLQGAARILKENKIEKLPVIDKDGKLVGLITYKDIT 207

Query: 274 RNFHKDLNTLSVE 286
           +   K +     +
Sbjct: 208 KAKDKPMACKDAK 220


>gi|110636621|ref|YP_676828.1| inosine-5'-monophosphate dehydrogenase [Cytophaga hutchinsonii ATCC
           33406]
 gi|110279302|gb|ABG57488.1| inosine-5'-monophosphate dehydrogenase [Cytophaga hutchinsonii ATCC
           33406]
          Length = 490

 Score =  113 bits (284), Expect = 3e-23,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 76/170 (44%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIA+       F   +  +     ++  +    S ++      
Sbjct: 45  NIPLVSAAMDTVTEYEMAIAMAHEGGLGFIHKNMSIEKQAEQVRRVKRSESGMIM---DP 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            +++    L DA+ I+ + + G + V+D+ ++L GI+T  D+   F K++N   +  +M 
Sbjct: 102 IVLQEDALLKDALKIMKDFKIGGIPVLDKNKRLVGILTNRDLR--FQKNVNK-PISKIMT 158

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             N     E   L  A ++L+++ I  L +VD   K  G++ + D+L+  
Sbjct: 159 VTNLVTAPEGIDLAKAEEILQKYKIEKLPIVDKQGKLKGLITYRDILKKK 208


>gi|325520917|gb|EGC99893.1| KpsF/GutQ family protein [Burkholderia sp. TJI49]
          Length = 85

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 2/85 (2%)

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              K+ GI T+GD+ R   +D    +LS+ +VM ++P+ I  D L   A++L+ +H I+ 
Sbjct: 1   ANGKVVGIFTDGDLRRVLARDGDFRSLSIAEVMTRDPRTIAPDHLAVEAVELMERHRINQ 60

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           ++VVD     IG ++  DL    +I
Sbjct: 61  MLVVDADGVLIGALNMHDLFSKKVI 85


>gi|298208267|ref|YP_003716446.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
           atlanticus HTCC2559]
 gi|83848188|gb|EAP86058.1| putative inosine-5'-monophosphate dehydrogenase [Croceibacter
           atlanticus HTCC2559]
          Length = 490

 Score =  113 bits (283), Expect = 4e-23,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAMAREGGIG-----VLHKNMSIKKQALKVRKVKRAESGMII 99

Query: 233 VKIG----CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA   + E   G + +VD+  KL GI+T  D+   F K+  + S+ +V
Sbjct: 100 DPVTLPITATVADAQASMKEFSIGGIPIVDDNGKLLGIVTNRDLR--FEKN-YSRSISEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N   + E T L  A  +L+QH I  L VV    K +G++ F D+ + 
Sbjct: 157 MTSENLVTVSEGTSLEDAEDILQQHKIEKLPVVSVEDKLVGLITFRDITKL 207



 Score = 36.4 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 30/70 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              +  +   + + +++  V  G  L DA  IL + +   + VV    KL G+IT  DI 
Sbjct: 146 EKNYSRSISEVMTSENLVTVSEGTSLEDAEDILQQHKIEKLPVVSVEDKLVGLITFRDIT 205

Query: 274 RNFHKDLNTL 283
           +   K +   
Sbjct: 206 KLSQKPIANK 215


>gi|119944050|ref|YP_941730.1| signal protein [Psychromonas ingrahamii 37]
 gi|119862654|gb|ABM02131.1| signaling protein with a cAMP-binding site and CBS domains
           [Psychromonas ingrahamii 37]
          Length = 614

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 5/144 (3%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           R F++     L   G L    +  + + H     +  +     +  A  ++S+KR   + 
Sbjct: 125 RFFNQAFAKRLRNQGTLQHDNISTARITHIMSKDLTTITADASIHQAALLMSKKRLSSLV 184

Query: 256 VVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           VVD  +KL GI+T+ D+  R   K LN  L V  +M K+P +I  + L+  AM  + ++N
Sbjct: 185 VVD-QEKLCGILTDRDLRNRVLAKGLNGDLLVGQIMTKDPVIIEPNALMFEAMLKMSENN 243

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L VV +  + IGI+   DL+R
Sbjct: 244 IHHLPVVRE-GRPIGIITSTDLIR 266


>gi|20094343|ref|NP_614190.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887402|gb|AAM02120.1| prdicted regulatory protein consisting of a uncharacterized
           conserved domain fused to a CBS domain [Methanopyrus
           kandleri AV19]
          Length = 501

 Score =  113 bits (282), Expect = 5e-23,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 61/172 (35%), Gaps = 12/172 (6%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-- 232
            T       +   AL IA        E +F +  P   L                  +  
Sbjct: 325 RTVRTGALSSYKMALEIAERLKEEIEEGEFTLTQPVEPLPREREFRPMPYRPPSLPRVRD 384

Query: 233 --------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                         + D    L EK    + VVDE  ++ GI+T  DI     +    L 
Sbjct: 385 IMTESVVTASPDESIEDVARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAAVAEGKRRL- 443

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+M ++   I     +  A++ + +HNIS L VVD   + +GIV   D+ 
Sbjct: 444 -KDIMTEDVITIRPHESVDEALRRMDRHNISCLPVVDGENRVVGIVTRTDIT 494



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M ++      D  +    + L +  I+ + VVD+  + +GIV   D+   
Sbjct: 382 VRDIMTESVVTASPDESIEDVARRLIEKEINHIPVVDEEGRIVGIVTSWDIAAA 435



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             + +  ++    + +A+  +      C+ VVD   ++ GI+T  DI     +
Sbjct: 447 MTEDVITIRPHESVDEALRRMDRHNISCLPVVDGENRVVGIVTRTDITEVLRR 499


>gi|255531497|ref|YP_003091869.1| inosine-5'-monophosphate dehydrogenase [Pedobacter heparinus DSM
           2366]
 gi|255344481|gb|ACU03807.1| inosine-5'-monophosphate dehydrogenase [Pedobacter heparinus DSM
           2366]
          Length = 489

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 70/172 (40%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         +LH    +         V  S   +  
Sbjct: 45  NVPIVSAAMDTVTEAGLAIAIAQAGGIG-----MLHKNMSIERQAEEVRKVKRSESGMIQ 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I+ + + G + V+D   KL GIIT  D+   F KD+    V +V
Sbjct: 100 DPVTLSANARVADAFQIMKDFKIGGIPVIDADNKLVGIITNRDLR--FQKDMQR-KVSEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N     E T L  A ++L+ + I  L V+D      G++ F D+ ++ 
Sbjct: 157 MTRENLITAPEGTTLLQAEEILQDYKIEKLPVIDAQGHLAGLITFKDIQKYK 208


>gi|86143072|ref|ZP_01061494.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
           blandensis MED217]
 gi|85830517|gb|EAQ48976.1| putative inosine-5'-monophosphate dehydrogenase [Leeuwenhoekiella
           blandensis MED217]
          Length = 490

 Score =  113 bits (282), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 76/171 (44%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++AIA+            VLH    +    V    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESSMAIAIAREGGIG-----VLHKNMTIEQQAVKVRRVKRAESGMII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                 +   + DA  +++E   G + +VD+   LKGI+T  D+   F KD N  ++ +V
Sbjct: 100 DPVTLNLDAQVKDAKRLMAEHSIGGIPIVDQEGHLKGIVTNRDLR--FEKD-NERAIVEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N     E T L+ A  +L+++ I  L VV +  K IG++ F D+ + 
Sbjct: 157 MTSENLITTAEGTSLSQAEVILQENKIEKLPVVTNDNKLIGLITFRDITKL 207


>gi|332293589|ref|YP_004432198.1| inosine-5'-monophosphate dehydrogenase [Krokinobacter diaphorus
           4H-3-7-5]
 gi|332171675|gb|AEE20930.1| inosine-5'-monophosphate dehydrogenase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 490

 Score =  112 bits (281), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAIAQEGGIG-----VLHKNMTIEEQAIKVRKVKRAESGMII 99

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD+  KL GI+T  D+   F K+ N   V +V
Sbjct: 100 DPVTLPLESNVGDAKAAMKEHSIGGIPIVDDAGKLIGIVTNRDLR--FEKN-NDRPVSEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N     E T L  A ++L+ H I  L VV D    IG++ F D+ + 
Sbjct: 157 MTSENLVTAAEGTSLQQAEEILQNHKIEKLPVVTDSNTLIGLITFRDITKL 207


>gi|289548974|ref|YP_003473962.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM
           14484]
 gi|289182591|gb|ADC89835.1| inosine-5'-monophosphate dehydrogenase [Thermocrinis albus DSM
           14484]
          Length = 484

 Score =  112 bits (281), Expect = 8e-23,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            ++H    +         V  S   + L
Sbjct: 39  KIPIVSAAMDTVTESRMAIALAREGGIG-----IIHRNMSIQEQAEEVEKVKKSESGMIL 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+ I+S+ +   V VV +G KL GI+T  D+      D +   V   
Sbjct: 94  KPVTVTPDTSVRTALDIMSKYKISGVPVVTDGNKLVGILTNRDLRFIKPTDYDK-PVSLF 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N  V  E   L  A ++L++H +  L +VD   + +G++   D+ +
Sbjct: 153 MTKENLIVAQELVTLEEAEEILQRHKVEKLPIVDKEGRLVGLITIKDITK 202


>gi|319957283|ref|YP_004168546.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis
           DSM 16511]
 gi|319419687|gb|ADV46797.1| inosine-5'-monophosphate dehydrogenase [Nitratifractor salsuginis
           DSM 16511]
          Length = 481

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 53/207 (25%), Positives = 84/207 (40%), Gaps = 16/207 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I + A+T E+  +V  H+ ++   ++L            P  SA M        AIA+
Sbjct: 1   MRIKMRALTFEDVLLVPQHSTVLPKEVSLKSRLTRRVGLNVPIVSAAMDTVTEHRAAIAM 60

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEK 249
                       ++H    + T       V  S   I +          + DA  +++E 
Sbjct: 61  ARLGGIG-----IIHKNMDIATQAFEVKKVKKSESGIIIDPIFIGPDATVADADAMMAEY 115

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   V VVDE +KL GIIT  D+     K   +L V DVM   P     + T L  A ++
Sbjct: 116 RISGVPVVDENRKLLGIITNRDMRFITDK---SLKVRDVMTPMPLVTAKKGTSLDEAAKV 172

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L++H I  L +VD+     G++   D+
Sbjct: 173 LQEHKIEKLPIVDENGILTGLITIKDI 199



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
               + +   +   K G  L +A  +L E +   + +VDE   L G+IT  DI + 
Sbjct: 147 KVRDVMTPMPLVTAKKGTSLDEAAKVLQEHKIEKLPIVDENGILTGLITIKDIEKR 202


>gi|284036113|ref|YP_003386043.1| inosine-5'-monophosphate dehydrogenase [Spirosoma linguale DSM 74]
 gi|283815406|gb|ADB37244.1| inosine-5'-monophosphate dehydrogenase [Spirosoma linguale DSM 74]
          Length = 490

 Score =  112 bits (280), Expect = 9e-23,   Method: Composition-based stats.
 Identities = 48/172 (27%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALAIA+ +          ++H    +         V  S   + +
Sbjct: 45  NVPLISAAMDTVTESALAIAMAQEGGIG-----IIHKNMSIEAQADQVRKVKRSESGMII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  I+ E + G + V+DE  KL GI+T  D+   F  D+ T  V  V
Sbjct: 100 DPITLLETATLGDAHKIMREFKIGGIPVIDESGKLVGILTNRDLR--FQHDM-TKPVTAV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  KN     E   L  A  +L+QH I  L +V+D  + +G++ + D+L+  
Sbjct: 157 MTQKNLITAREGLTLEEAETILQQHRIEKLPIVNDTYQLVGLITYKDILKKK 208


>gi|156840794|ref|XP_001643775.1| hypothetical protein Kpol_480p4 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114400|gb|EDO15917.1| hypothetical protein Kpol_480p4 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 282

 Score =  112 bits (280), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 12/183 (6%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
               G+V+I G GKS  I SK+   L S G  S  +H  EA HGD+G+I   D+I + S 
Sbjct: 44  LKTGGKVIIVGCGKSYKIASKIVVMLNSLGMSSTLLHPIEAIHGDMGVIREGDVIWMCSH 103

Query: 121 SGSSDELKAILYYARR----FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL--- 173
            G + E+   +    +     +I  I ITS+ +S V+   D  + + +  +         
Sbjct: 104 GGETLEVIKFIELVHKVWSCNAITTIGITSKEESTVSRICDHKIVIKQYIKEDILQRGLK 163

Query: 174 APTTSAIMQLAIGDALAIALLE-SRNFSEND----FYVLHPGGKLGTLFVCASDVMHSGD 228
            PT S    L + D + +++ E   N+        F   HPGG +G              
Sbjct: 164 TPTISTSSMLIVLDCIVMSMSEVYYNYDYESRLRFFNKNHPGGSIGFQLENDDTDKDKTR 223

Query: 229 SIP 231
            + 
Sbjct: 224 VVD 226


>gi|325295690|ref|YP_004282204.1| inosine-5'-monophosphate dehydrogenase [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325066138|gb|ADY74145.1| inosine-5'-monophosphate dehydrogenase [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 488

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   + +
Sbjct: 42  NIPIMSAAMDTVTEAELAIAIAREGGIG-----IIHKNLSIEEQAEEVDRVKRSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DA  ++ + +   + V DE  KL GIIT  DI   F KD  T  +++V
Sbjct: 97  KPVTVSPDQTIADAEGLMRKYKISGLPVTDENGKLLGIITNRDIR--FVKD-YTKKIKEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N K +   T L  A ++L ++ I  L VVD+     G++   D+
Sbjct: 154 MTKENLKTVPVGTTLEEAKEILHKYKIEKLPVVDENGYLKGLITIKDI 201


>gi|225010649|ref|ZP_03701119.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           MS024-3C]
 gi|225005202|gb|EEG43154.1| inosine-5'-monophosphate dehydrogenase [Flavobacteria bacterium
           MS024-3C]
          Length = 490

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESRMAIAMAREGGIG-----VLHKNMSIEAQALKVRKVKRAESGMII 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +   + DA   + E   G + +VD+  KL GI+T  D+   F K+ N   + +V
Sbjct: 100 DPVTLPLTATVKDAKDNMREFSIGGIPIVDKDHKLLGIVTNRDLR--FEKN-NARPISEV 156

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M       + E T L  A  +L+Q+ I  L V++   K +G++ F D+ + 
Sbjct: 157 MTSGELVTVAEGTSLAQAEDILQQNKIEKLPVINKDNKLVGLITFRDITKL 207



 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +   +  V  G  L  A  IL + +   + V+++  KL G+IT  DI +   K +   
Sbjct: 157 MTSGELVTVAEGTSLAQAEDILQQNKIEKLPVINKDNKLVGLITFRDITKLTQKPIANK 215


>gi|15922445|ref|NP_378114.1| hypothetical protein ST2119 [Sulfolobus tokodaii str. 7]
 gi|15623234|dbj|BAB67223.1| 164aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 164

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 54/112 (48%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + ++K    +  A   + +   G + V+D+  K+ GIITE DI +   +      V+
Sbjct: 10  NKVVHVIKENDSVKTAAEEMKKHNLGALVVIDDNDKIVGIITERDIVKVVAEGKLDAKVK 69

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D M +N   + EDT +T A++++  H    L ++    K IGIV   DL + 
Sbjct: 70  DYMTRNVIGVTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKA 121



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 23/44 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    P+ DA+ I+ +  F  + ++ +  K+ GI++  D+ +  
Sbjct: 79  VTEDTPITDALEIMLDHGFRHLPIIGKDGKVIGIVSIRDLSKAI 122


>gi|327310796|ref|YP_004337693.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947275|gb|AEA12381.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 136

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 1/102 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
             P+ +    + EK+ G V VVDE  +  GI+TE D+     K L+    +  VM +NP 
Sbjct: 24  NTPVKEVANSMYEKKIGSVVVVDEAGRPVGIVTERDLVYVCAKGLSADTPIWMVMTENPV 83

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I ED  L  A++ +R+ N+  L VVD   K +GI+   D+L
Sbjct: 84  TIAEDAPLLDAVEKMRELNVRHLPVVDKEGKLVGILSVRDVL 125



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V DVM++      ++T +      + +  I  ++VVD+  + +GIV   DL+
Sbjct: 8   LRVSDVMVREVVTAGKNTPVKEVANSMYEKKIGSVVVVDEAGRPVGIVTERDLV 61



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            M   ++   +    PL+DA+  + E     + VVD+  KL GI++  D+ 
Sbjct: 75  WMVMTENPVTIAEDAPLLDAVEKMRELNVRHLPVVDKEGKLVGILSVRDVL 125


>gi|332663302|ref|YP_004446090.1| inosine-5'-monophosphate dehydrogenase [Haliscomenobacter hydrossis
           DSM 1100]
 gi|332332116|gb|AEE49217.1| inosine-5'-monophosphate dehydrogenase [Haliscomenobacter hydrossis
           DSM 1100]
          Length = 520

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 77/196 (39%), Gaps = 17/196 (8%)

Query: 151 VVACHADIVLTLPKEPESCPHG----LAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           ++A     VL    +  S         AP  SA M       LAIA+            +
Sbjct: 48  LLAPAYSEVLPREVDITSQLTRELRLNAPIVSAAMDTVTEAKLAIAIARQGGIG-----I 102

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +H    +         V  S   + +          + DA + +   + G + VVD    
Sbjct: 103 IHKNMSIAEQAEQVRLVKRSESGMIIDPITLRPDATIRDAKSHMERFKIGGIPVVDAENH 162

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           L G++T  D+   F   L+   V ++M  KN       T L  A ++L+++ I  L VVD
Sbjct: 163 LVGVLTNRDLR--FETSLDR-PVYELMTSKNLVTAPAGTTLYQAREILQRNKIEKLPVVD 219

Query: 322 DCQKAIGIVHFLDLLR 337
           D  K +G++ + D+++
Sbjct: 220 DHNKLVGLITYKDIMK 235



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  ++     G  L  A  IL   +   + VVD+  KL G+IT  DI +  +
Sbjct: 186 MTSKNLVTAPAGTTLYQAREILQRNKIEKLPVVDDHNKLVGLITYKDIMKVIN 238


>gi|300713151|ref|YP_003739190.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
 gi|299060222|emb|CAX53472.1| D-arabinose 5-phosphate isomerase [Erwinia billingiae Eb661]
          Length = 118

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNT 282
           M +   IP V     + DA+  L+    G VAV DE  +L G+ T+GD+ R   +    +
Sbjct: 1   MRTEAKIPQVFETVTVHDAMFELTRTGLGLVAVKDEMHRLSGVFTDGDLRRWLLRGGTLS 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M      +  + L   A+    +  IS   V  +  + IG ++  D+   GI
Sbjct: 61  APVADAMTSPGFTLSANQLAAEALDFFHKRKISAAPVTSETGRVIGAINAHDIREAGI 118


>gi|311745457|ref|ZP_07719242.1| inosine-5'-monophosphate dehydrogenase [Algoriphagus sp. PR1]
 gi|126578009|gb|EAZ82229.1| inosine-5'-monophosphate dehydrogenase [Algoriphagus sp. PR1]
          Length = 492

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGD--ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        A+AIAL     F   +  +     ++  +    + ++    ++
Sbjct: 45  NIPLVSAAMDTVTEAELAIAIALEGGLGFVHKNMSIEQQAAQVRKVKRSQAGMILDPITL 104

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            +      + DA +I+ E   G + VVDE + LKGIIT  D+   F KD N   + ++M 
Sbjct: 105 HI---DSFVKDAESIMREFHIGGIPVVDENRTLKGIITNRDLR--FIKDQNR-PIREIMT 158

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N         L  A ++L+++ I  L +VD+  K  G++ + D+L+
Sbjct: 159 IDNLITAKSGVSLEQAEEILQEYKIEKLPIVDEDNKLTGLITYKDILK 206


>gi|296109848|ref|YP_003616797.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus infernus
           ME]
 gi|295434662|gb|ADG13833.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus infernus
           ME]
          Length = 490

 Score =  111 bits (279), Expect = 1e-22,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 12/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA----SDVMHSGD 228
             P  S+ M       +AIAL            V+H    +                   
Sbjct: 44  NIPILSSAMDTVTEKEMAIALARLGGLG-----VIHRNMSIEEQVHQVLAVKKADEFIIK 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            + +V     + +A+ ++       + V+D  +K+ GIIT  DI     K +    V++V
Sbjct: 99  EVIVVSPEDSVGEAMELMENYSVSGLPVIDRDEKVVGIITHRDIKAIKDKGV---KVKEV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M KN     ED     A++++  + +  L +VDD  K IGIV   D+L+ 
Sbjct: 156 MTKNVVTAKEDISEDEALEIMYSNRVERLPIVDDEGKLIGIVTLRDILKK 205


>gi|319789126|ref|YP_004150759.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
           HB-1]
 gi|317113628|gb|ADU96118.1| inosine-5'-monophosphate dehydrogenase [Thermovibrio ammonificans
           HB-1]
          Length = 488

 Score =  111 bits (278), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   + +
Sbjct: 42  NIPIMSAAMDTVTEAELAIAIAREGGIG-----IIHKNMSIEEQAEEVDRVKRSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               VK    + +A  ++ + +   + VV++  KL GIIT  DI   F KD +   + +V
Sbjct: 97  KPVTVKPEQTIAEAEALMKKYKISGLPVVNDEGKLVGIITNRDIR--FVKDFSK-RIAEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N + +   T L  A ++L ++ I  L VVD+     G++   D+
Sbjct: 154 MTKENLRTVPVGTTLEEAKEILHKYKIEKLPVVDENGYLKGLITIKDI 201


>gi|167753424|ref|ZP_02425551.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
 gi|167658049|gb|EDS02179.1| hypothetical protein ALIPUT_01698 [Alistipes putredinis DSM 17216]
          Length = 490

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL            V+H    +         V         
Sbjct: 45  NIPIVSAAMDTVTEAPLAIALAREGGIG-----VIHKNMSIAEQAAHVRKVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++ E + G + VV   Q L GI+T  D+   F +D+N   +++V
Sbjct: 100 DPITISKDDTVGDALALMKENKIGGIPVVAPDQHLIGIVTNRDLR--FQRDMNR-KIDEV 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K   V   ++ L  A  +L ++ I  L VVD   K +G++ + D+ +
Sbjct: 157 MTKEGLVTTHNSDLQRAADILLRNKIEKLPVVDADGKLVGLITYKDITK 205


>gi|326801032|ref|YP_004318851.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
 gi|326551796|gb|ADZ80181.1| inosine-5'-monophosphate dehydrogenase [Sphingobacterium sp. 21]
          Length = 491

 Score =  111 bits (277), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 47/172 (27%), Positives = 75/172 (43%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL ++         +LH              V  S   +  
Sbjct: 45  NIPLISAAMDTVTEAELAIALAQAGGIG-----ILHKNMTKEAQAHEVRKVKRSESGMIQ 99

Query: 233 VKIG----CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA TI+ + + G + VVD  +KL GI+T  D+   F KD+    + ++
Sbjct: 100 DPVTLNEAALVKDAFTIMKDNKIGGIPVVDGEKKLVGIVTNRDLR--FQKDM-ERPISEL 156

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+  V+    T L  A ++L+ + I  L VVD   K +G++ F D+ +F 
Sbjct: 157 MTKDNLVVAPIGTNLVKAEEILQNYKIEKLPVVDGEGKLVGLITFKDIQKFK 208


>gi|256811441|ref|YP_003128810.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
           AG86]
 gi|256794641|gb|ACV25310.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus fervens
           AG86]
          Length = 496

 Score =  110 bits (276), Expect = 2e-22,   Method: Composition-based stats.
 Identities = 46/172 (26%), Positives = 71/172 (41%), Gaps = 18/172 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIAL          RN +  D   +H    +          + 
Sbjct: 44  NIPIISAAMDTVTEKEMAIALARLGGLGVIHRNMTIED--QVHQVQAVKKADEIVVKDVI 101

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +      V     + DAI I+       + VVD  +KL GIIT  D+      +  +  V
Sbjct: 102 T------VSPEDTIGDAINIMENYSISGLPVVDNEEKLVGIITHRDVK---AIEDKSKKV 152

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           EDVM K+     ED     A++L+  + +  L +VDD ++ IGI+   D+L+
Sbjct: 153 EDVMTKDVVCAKEDIKEEEALELMYANRVERLPIVDDEKRLIGIITLRDILK 204



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                +        DVM         K      +A+ ++   R   + +VD+ ++L GII
Sbjct: 140 RDVKAIEDKSKKVEDVMTKDVVCA--KEDIKEEEALELMYANRVERLPIVDDEKRLIGII 197

Query: 268 TEGDIFRN 275
           T  DI + 
Sbjct: 198 TLRDILKR 205


>gi|222100218|ref|YP_002534786.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
           4359]
 gi|221572608|gb|ACM23420.1| Inosine-5'-monophosphate dehydrogenase [Thermotoga neapolitana DSM
           4359]
          Length = 487

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 20/173 (11%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M      ALA AL          RN S  +    H    +            
Sbjct: 42  NIPLVSAAMDTVTEAALAKALAREGGIGIIHRNLSPEEQA--HQVSIVKKTENGI----- 94

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +A+ ++SE + G + VVDE  KL G++T  DI   F ++L+   +
Sbjct: 95  -IYDPITVTPDMTVKEAVDLMSEYKIGGLPVVDEEGKLVGLLTNRDIR--FERNLSK-KI 150

Query: 286 EDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +D+M       V   D  L  A ++L +H I  L +V    K +G++   D+L
Sbjct: 151 KDLMTPREKLIVAPPDISLEKAKEILHEHRIEKLPLVSRDNKLVGLITIKDIL 203


>gi|156743706|ref|YP_001433835.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235034|gb|ABU59817.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 225

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                 ++     L +A  ++ ++R   + VV E  KL GIIT GD+      D      
Sbjct: 10  MSTPAIVIAPTTTLAEAQRLMEQRRIRRLPVV-ENGKLIGIITRGDLRAAQPADTTLSYY 68

Query: 280 -----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                L+ ++V + M ++   I  D     A +L+  + I  L VVDD  + IGI+   D
Sbjct: 69  EWRALLDRVTVVECMTRHVVTITPDASALDAARLMLTYKIGGLPVVDDEGRVIGIITESD 128

Query: 335 LLRF 338
           L R 
Sbjct: 129 LFRL 132



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    V D M     VI   T L  A +L+ Q  I  L VV +  K IGI+   DL
Sbjct: 1   MKNQRVADWMSTPAIVIAPTTTLAEAQRLMEQRRIRRLPVV-ENGKLIGIITRGDL 55



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%), Gaps = 6/82 (7%)

Query: 199 FSENDFYVLHPGGK------LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
            +  D     P            L    + V      +  +      +DA  ++   + G
Sbjct: 50  ITRGDLRAAQPADTTLSYYEWRALLDRVTVVECMTRHVVTITPDASALDAARLMLTYKIG 109

Query: 253 CVAVVDEGQKLKGIITEGDIFR 274
            + VVD+  ++ GIITE D+FR
Sbjct: 110 GLPVVDDEGRVIGIITESDLFR 131


>gi|163782022|ref|ZP_02177021.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
 gi|159882554|gb|EDP76059.1| inosine monophosphate dehydrogenase [Hydrogenivirga sp. 128-5-R1-1]
          Length = 490

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 5/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL           +   P G+                  P+
Sbjct: 44  NIPIVSAAMDTVTEARLAIALAREGGLG--VIHRNMPIGEQAREVEKVKKSESGMILNPV 101

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V+    + +A+ I+   +   V VVDE +KL GI+T  D+ R          V   M K
Sbjct: 102 TVRPEASVREALEIMERYKISGVPVVDEEEKLVGILTNRDL-RFIKPSDYDKPVTQFMTK 160

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            N     E   L  A +LL++  +  L +VD   +  G++   D+++
Sbjct: 161 ENLVTAEEGIGLDEATELLQKFKVEKLPIVDSEGRIKGLITIKDIVK 207


>gi|317121121|ref|YP_004101124.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
           DSM 12885]
 gi|315591101|gb|ADU50397.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter marianensis
           DSM 12885]
          Length = 549

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            ++H              V  S   + +
Sbjct: 104 RIPLVSAAMDTVTEARLAIALAREGGIG-----IIHKNMPPEQQAAEVDKVKRSEHGVIV 158

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ +++      V +VD    L GIIT  D+   F ++L+   + +V
Sbjct: 159 DPFYLSPQHRVRDALQLMARYHISGVPIVDGDGVLVGIITNRDVR--FEENLDR-PIAEV 215

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +       E T L  A +++RQH I  L +VD   +  G++   D+ + 
Sbjct: 216 MTREGLVTAPEGTTLARAKEIMRQHKIEKLPLVDGAGRLRGLITIKDIEKA 266


>gi|332877639|ref|ZP_08445382.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
 gi|332684388|gb|EGJ57242.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 329 str. F0087]
          Length = 489

 Score =  110 bits (276), Expect = 3e-22,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      A+AIA+           +  +     ++  +    S ++    ++
Sbjct: 44  NVPIISAAMDTVTEAAMAIAMAREGGIGVLHKNMTIEEQAKQIRKVKRAESGMIIDPVTL 103

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            L      + DA   + E   G + +VD+   LKGI+T  D+   F +D NT  + +VM 
Sbjct: 104 HL---DAKVADAKRCMKENNIGGIPIVDDNGILKGIVTNRDLR--FEQD-NTRPIVEVMT 157

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            KN  +  E T +  A ++L++  I  L VVD   K +G++ F D+
Sbjct: 158 AKNLVIANEGTSMKEAEKILQRSKIEKLPVVDKNYKLVGLITFRDI 203



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  ++ +   G  + +A  IL   +   + VVD+  KL G+IT  DI     K ++  
Sbjct: 156 MTAKNLVIANEGTSMKEAEKILQRSKIEKLPVVDKNYKLVGLITFRDIANLQEKSVSNK 214


>gi|228473712|ref|ZP_04058460.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga gingivalis
           ATCC 33624]
 gi|228274859|gb|EEK13676.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga gingivalis
           ATCC 33624]
          Length = 492

 Score =  110 bits (275), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +    +    V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESAMAIAIAREGGIG-----VLHKNMTIEEQALQVRKVKRAESGMII 99

Query: 233 VKIGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +   L     DA   + E   G + +VDE   LKGI+T  D+   F +D NT  +  V
Sbjct: 100 DPVTLSLSSTVGDAKHCMKEHSIGGIPIVDEQGILKGIVTNRDLR--FERD-NTRPITQV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   +  A ++L  + I  L VV+   K +G++ F D+
Sbjct: 157 MTYENLITAPEGISMKDAEKILENNKIEKLPVVNKDNKLVGLITFRDI 204


>gi|20095036|ref|NP_614883.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
 gi|19888306|gb|AAM02813.1| IMP dehydrogenase [Methanopyrus kandleri AV19]
          Length = 502

 Score =  109 bits (274), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 9/212 (4%)

Query: 133 YARRFSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           Y R+     +A+T ++  ++   + +    + +            P  SA M       +
Sbjct: 5   YTRKLEDAELALTFDDVLLLPERSSVEPADVDVSTRVTVNYRINIPILSAAMDTVTEAEM 64

Query: 190 AIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           AIA+           +  V     ++  +      V      +  +     +  A+ ++ 
Sbjct: 65  AIAMARHGGLGVIHRNMTVEEQVKEVRRVKEARDVVQR---DVVTISPDESVKRAVELME 121

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AM 306
           +   G + VVDE  K+ GIIT  D+     +++  L V+ VM + P VI E   L   A+
Sbjct: 122 KHDVGGLPVVDEEGKVVGIITRRDVGLLSEEEIGELDVKSVMTEEPVVIEEGEDLEERAL 181

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++R+  I  + VVDD  + +GIV   D+   
Sbjct: 182 RVMREEKIERVPVVDDEGRLLGIVTAKDVTEL 213


>gi|281412873|ref|YP_003346952.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
           RKU-10]
 gi|281373976|gb|ADA67538.1| inosine-5'-monophosphate dehydrogenase [Thermotoga naphthophila
           RKU-10]
          Length = 482

 Score =  109 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 6/166 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALA AL             L P  +   + +              
Sbjct: 37  NIPLVSAAMDTVTEAALAKALAREGGIGIIH-KNLTPDEQARQVSIVKKTENGIIYDPIT 95

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M   
Sbjct: 96  VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR--FEKNLSK-KIKDLMTPR 152

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V   D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 153 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|170289271|ref|YP_001739509.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
 gi|170176774|gb|ACB09826.1| inosine-5'-monophosphate dehydrogenase [Thermotoga sp. RQ2]
          Length = 482

 Score =  109 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 6/166 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALA AL             L P  +   + +              
Sbjct: 37  NIPLVSAAMDTVTEAALAKALAREGGIGIIH-KNLTPDEQARQVSIVKKTENGIIYDPIT 95

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M   
Sbjct: 96  VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR--FEKNLSK-KIKDLMTPR 152

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V   D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 153 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|15644099|ref|NP_229148.1| inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
 gi|148270565|ref|YP_001245025.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
           RKU-1]
 gi|4981907|gb|AAD36418.1|AE001789_3 inosine-5'-monophosphate dehydrogenase [Thermotoga maritima MSB8]
 gi|147736109|gb|ABQ47449.1| inosine-5'-monophosphate dehydrogenase [Thermotoga petrophila
           RKU-1]
          Length = 482

 Score =  109 bits (274), Expect = 5e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 6/166 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALA AL             L P  +   + +              
Sbjct: 37  NIPLVSAAMDTVTEAALAKALAREGGIGIIH-KNLTPDEQARQVSIVKKTENGIIYDPIT 95

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M   
Sbjct: 96  VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR--FEKNLSK-KIKDLMTPR 152

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V   D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 153 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 198


>gi|182625554|ref|ZP_02953325.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens D
           str. JGS1721]
 gi|177909242|gb|EDT71707.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens D
           str. JGS1721]
          Length = 484

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSASMDTVTESKMAIAMAREGGIG-----IIHKNMTIEDQAREVDRVKRQENGVIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++++ R   V V  E  KL GIIT  DI    + D     V +V
Sbjct: 96  DPIFLSEDHTVREALDLMAQYRISGVPVTRE-GKLVGIITNRDIVFETNYD---KKVSEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+P     E T LT A+++L+QH I  L +VDD     G++   D+ +  
Sbjct: 152 MTKSPLVTAKEGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEKAK 203


>gi|268679127|ref|YP_003303558.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
           DSM 6946]
 gi|268617158|gb|ACZ11523.1| inosine-5'-monophosphate dehydrogenase [Sulfurospirillum deleyianum
           DSM 6946]
          Length = 482

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 71/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    + +       V  S   I +
Sbjct: 40  NIPLVSAAMDTVTEHRAAIMMARLGGIG-----IIHKNMDIESQVREVRRVKKSESGIII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    L DA+ I+SE R   V VVD+   L GI+T  D+   F  D  T +VE++
Sbjct: 95  DPVSIKAHATLRDALAIMSEYRISGVPVVDDSNTLIGILTNRDLR--FEND-YTKNVEEL 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P   + + T L  A  + R + +  L VVD+  K  G++   DL +
Sbjct: 152 MTKMPLITVKKGTTLDDAEAIFRTNKVEKLPVVDEDNKLSGLITIKDLKK 201


>gi|195952569|ref|YP_002120859.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195932181|gb|ACG56881.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 489

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN +  +            + +       
Sbjct: 42  NIPIVSAAMDTVTEYKMAIAMARKGGIGIIHRNMTPEEQAK--------EVELVKKSESG 93

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +K    + +A  ++ + +   + VVD+  KL GI+T  D+    H+D +   +
Sbjct: 94  MILKPITIKSTDTVQEAKKLMDKYKISGLPVVDDDGKLIGILTNRDLRFVKHQDFSK-PI 152

Query: 286 EDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              M  KN     E   L  A ++LR H I  L +VDD  K  G++   D+++
Sbjct: 153 SMFMTSKNLITAKEGISLEDATEILRAHKIEKLPIVDDEGKVKGLITIKDIMK 205



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  +  ++   K G  L DA  IL   +   + +VD+  K+KG+IT  DI +   
Sbjct: 153 SMFMTSKNLITAKEGISLEDATEILRAHKIEKLPIVDDEGKVKGLITIKDIMKRIQ 208


>gi|18311258|ref|NP_563192.1| inositol-5-monophosphate dehydrogenase [Clostridium perfringens
           str. 13]
 gi|110800169|ref|YP_696948.1| inosine 5'-monophosphate dehydrogenase [Clostridium perfringens
           ATCC 13124]
 gi|168205104|ref|ZP_02631109.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens E
           str. JGS1987]
 gi|168211655|ref|ZP_02637280.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens B
           str. ATCC 3626]
 gi|168213185|ref|ZP_02638810.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens CPE
           str. F4969]
 gi|168216760|ref|ZP_02642385.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           NCTC 8239]
 gi|169347177|ref|ZP_02866119.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens C
           str. JGS1495]
 gi|18145941|dbj|BAB81982.1| inositol-monophosphate dehydrogenase [Clostridium perfringens str.
           13]
 gi|110674816|gb|ABG83803.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           ATCC 13124]
 gi|169296860|gb|EDS78989.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens C
           str. JGS1495]
 gi|170663361|gb|EDT16044.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens E
           str. JGS1987]
 gi|170710401|gb|EDT22583.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715217|gb|EDT27399.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens CPE
           str. F4969]
 gi|182381122|gb|EDT78601.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           NCTC 8239]
          Length = 484

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSASMDTVTESKMAIAMAREGGIG-----IIHKNMTIEDQAREVDRVKRQENGVIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++++ R   V V  E  KL GIIT  DI    + D     V +V
Sbjct: 96  DPIFLSEDHTVREALDLMAQYRISGVPVTRE-GKLVGIITNRDIVFETNYD---KKVSEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+P     E T LT A+++L+QH I  L +VDD     G++   D+ +  
Sbjct: 152 MTKSPLVTAKEGTTLTEALEILKQHKIEKLPLVDDENNLKGLITIKDIEKAK 203


>gi|62738150|pdb|1VRD|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
           A Resolution
 gi|62738151|pdb|1VRD|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase (Tm1347) From Thermotoga Maritima At 2.18
           A Resolution
          Length = 494

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 69/166 (41%), Gaps = 6/166 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALA AL             L P  +   + +              
Sbjct: 49  NIPLVSAAMDTVTEAALAKALAREGGIGIIH-KNLTPDEQARQVSIVKKTENGIIYDPIT 107

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +AI +++E + G + VVDE  +L G++T  D+   F K+L+   ++D+M   
Sbjct: 108 VTPDMTVKEAIDLMAEYKIGGLPVVDEEGRLVGLLTNRDVR--FEKNLSK-KIKDLMTPR 164

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V   D  L  A ++L QH I  L +V    K +G++   D++
Sbjct: 165 EKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIM 210


>gi|124028010|ref|YP_001013330.1| hypothetical protein Hbut_1148 [Hyperthermus butylicus DSM 5456]
 gi|123978704|gb|ABM80985.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 283

 Score =  109 bits (273), Expect = 6e-22,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 58/119 (48%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    + +V     L     ++   R G V V+DE +K  GI+T  D  R   +  ++  
Sbjct: 10  YMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRLVAERFSSKP 69

Query: 285 -----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V D+M ++P  I ++  L  A +L+ +H +S L VVD+  K +GI+   D++R 
Sbjct: 70  LVNIAVADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDEDGKLVGIITKSDIVRA 128



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ +DVM  +P  I  D  L +A QL+ +H  S + VV+D    +GIV   ++L+ 
Sbjct: 225 LTAQDVMTPSPVTIGPDEDLALAAQLMLRHGFSSVPVVEDE-TPVGIVVKHNILKA 279



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 2/132 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           + +DF  L          V  +           ++    L +A  ++ +     + VVDE
Sbjct: 53  TMSDFVRLVAERFSSKPLVNIAVADIMTRDPVTIRDNRSLREAARLMIKHGVSGLPVVDE 112

Query: 260 GQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             KL GIIT+ DI R F + L     V D M  +         +     LL    +  ++
Sbjct: 113 DGKLVGIITKSDIVRAFAEKLRGKFKVRDYMEADFPDATPWHSIYYVADLLYNSPVKRVL 172

Query: 319 VVDDCQKAIGIV 330
           VV + ++ +GI+
Sbjct: 173 VV-EGERLLGII 183



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D M     V+   + L    +L+ ++ I  ++V+D+ +K +GIV   D +R 
Sbjct: 5   FRVSDYMSTPVVVVTPHSDLAHVRRLMLRYRIGRVVVIDEAEKPVGIVTMSDFVRL 60


>gi|148655070|ref|YP_001275275.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567180|gb|ABQ89325.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 225

 Score =  109 bits (272), Expect = 7e-22,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                 ++     L +A  ++ ++R   + +V E  KL GIIT GD+      D      
Sbjct: 10  MSTPAIVIAPTATLAEAQRLMEQRRIRRLPIV-ENGKLAGIITRGDLRSAQPVDTTLSYY 68

Query: 280 -----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                L+ ++V + M ++   I  D     A +L+ +H I  L VVDD  + +GI+   D
Sbjct: 69  EWRALLDRVTVAECMTRHVITITPDASTLDAARLMLKHKIGGLPVVDDEGRVVGIITESD 128

Query: 335 LLRF 338
           L R 
Sbjct: 129 LFRL 132



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    V D M     VI     L  A +L+ Q  I  L +V +  K  GI+   DL
Sbjct: 1   MKDQRVADWMSTPAIVIAPTATLAEAQRLMEQRRIRRLPIV-ENGKLAGIITRGDL 55



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              L    +        +  +      +DA  ++ + + G + VVD+  ++ GIITE D+
Sbjct: 70  WRALLDRVTVAECMTRHVITITPDASTLDAARLMLKHKIGGLPVVDDEGRVVGIITESDL 129

Query: 273 FR 274
           FR
Sbjct: 130 FR 131


>gi|307595012|ref|YP_003901329.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550213|gb|ADN50278.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 157

 Score =  109 bits (272), Expect = 8e-22,   Method: Composition-based stats.
 Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           VK   PL + I I++EK  G + V DE  +  G+ TE D+ R    +  LN L+V DVM 
Sbjct: 17  VKDDKPLTEVIKIMNEKNIGSIIVTDEEGRAIGVFTERDLLRLVASNVSLNALTVGDVMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +N  VI ED  L  A+ ++ +H I  L +VD+  K IGIV   D
Sbjct: 77  RNVIVIEEDASLIKAVHIMAKHGIRHLPIVDEDGKVIGIVSIRD 120



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V +VM +    + +D  LT  ++++ + NI  ++V D+  +AIG+    DLLR 
Sbjct: 6   VREVMREVLITVKDDKPLTEVIKIMNEKNIGSIIVTDEEGRAIGVFTERDLLRL 59



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 36/82 (43%), Gaps = 8/82 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++ +++    LI A+ I+++     + +VDE  K+ GI++  D      + L  + +
Sbjct: 75  MTRNVIVIEEDASLIKAVHIMAKHGIRHLPIVDEDGKVIGIVSIRDAAIALARLLVDMDI 134

Query: 286 EDV--------MIKNPKVILED 299
             +        MI++   I E 
Sbjct: 135 GKLGATEEEVSMIRDLINIDEG 156


>gi|313903533|ref|ZP_07836923.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter
           subterraneus DSM 13965]
 gi|313466086|gb|EFR61610.1| inosine-5'-monophosphate dehydrogenase [Thermaerobacter
           subterraneus DSM 13965]
          Length = 509

 Score =  109 bits (272), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            ++H              V  S   + +
Sbjct: 64  RIPLVSAAMDTVTEARLAIALAREGGIG-----IIHKNMPPERQAAEVDKVKRSEHGVIV 118

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ +++      V +VD    L GIIT  D+   F +DL   S+ +V
Sbjct: 119 DPFSLSPHHRVRDALELMARYHISGVPIVDGHGILVGIITNRDVR--FEEDL-ERSIAEV 175

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +       E T L  A +++RQH I  L +VD   +  G++   D+ + 
Sbjct: 176 MTREGLVTAPEGTTLARAREIMRQHKIEKLPLVDGAGRLRGLITIKDIEKA 226


>gi|126459756|ref|YP_001056034.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249477|gb|ABO08568.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 138

 Score =  108 bits (271), Expect = 9e-22,   Method: Composition-based stats.
 Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + D    + EK+ G V VVDE  K  GIITE D+     + L+       VM +N
Sbjct: 25  KKDEKIKDVALRMYEKKVGSVVVVDEEGKPVGIITERDMVYVCARGLSPDTPAWMVMTEN 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  I E+ L+T AM+ +RQ +I  L VVD   K +GI+ F D+L
Sbjct: 85  PVTINENALVTEAMEKMRQLDIRHLPVVDSTGKLVGIISFRDVL 128



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M+K      +D  +      + +  +  ++VVD+  K +GI+   D++
Sbjct: 11  LRVSDIMVKEVVTAKKDEKIKDVALRMYEKKVGSVVVVDEEGKPVGIITERDMV 64



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 22/53 (41%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              M   ++   +     + +A+  + +     + VVD   KL GII+  D+ 
Sbjct: 76  PAWMVMTENPVTINENALVTEAMEKMRQLDIRHLPVVDSTGKLVGIISFRDVL 128


>gi|308050118|ref|YP_003913684.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307632308|gb|ADN76610.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ferrimonas balearica DSM 9799]
          Length = 615

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 40/146 (27%), Positives = 65/146 (44%), Gaps = 6/146 (4%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCV 254
           R F+      L    +       ++  + S  + P+  V    P+ +A  ++   R   V
Sbjct: 125 RFFNRKHAERLRHSARYLAREHLSTARIRSVMASPVQSVGPFTPIQEAAQLMRASRISSV 184

Query: 255 AVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            VV +  +L GI+T+ D+  R   + +     V +VM  NP  +   TL+  AM  + QH
Sbjct: 185 LVV-QDNRLLGIVTDRDLRNRVLAEGVPVDSPVSEVMTANPVSVPSQTLVFEAMLAMSQH 243

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
           NI  L V DD    +G+V   DL+R 
Sbjct: 244 NIHHLPVCDDE-TPVGVVTSTDLIRA 268



 Score = 41.4 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 20/47 (42%), Gaps = 1/47 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           V     + +A+  +S+     + V D+     G++T  D+ R    D
Sbjct: 227 VPSQTLVFEAMLAMSQHNIHHLPVCDDE-TPVGVVTSTDLIRAQRSD 272


>gi|163846201|ref|YP_001634245.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222523951|ref|YP_002568421.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus sp. Y-400-fl]
 gi|163667490|gb|ABY33856.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aurantiacus
           J-10-fl]
 gi|222447830|gb|ACM52096.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus sp. Y-400-fl]
          Length = 493

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL            ++H    + +       V  S      
Sbjct: 46  NIPIVSAAMDTVTEHRLAIALAREGGIG-----IIHKNMPIASQAEMVRKVKRSESGMIT 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ +++E +   V V      L GIIT  D+   F  D N   + D+
Sbjct: 101 DPITLPPDRTVGDALDLMAEYKISGVPVTTADGDLVGIITNRDLR--FETDRNR-PIRDL 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N   + E T L  A ++L +H I  ++VVD+  K  G++   D+++
Sbjct: 158 MTSRNLVTVPEGTTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMK 207



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 26/56 (46%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + +  ++  V  G  L +A  +L   R   V VVDE  KL G+IT  DI +   
Sbjct: 155 RDLMTSRNLVTVPEGTTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMKRIE 210


>gi|75908110|ref|YP_322406.1| signal transduction protein [Anabaena variabilis ATCC 29413]
 gi|75701835|gb|ABA21511.1| Predicted signal transduction protein containing CBS domains
           [Anabaena variabilis ATCC 29413]
          Length = 152

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  +VK   PL +AI IL+E+R   + VVD   KL GII+E D+             
Sbjct: 9   MSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQETGVTPPAYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           R+ HK L   +V +VM KNP  +  +  +  A QL+   N+  L
Sbjct: 69  MFLDSVIYLQNPAVYERDLHKALGQ-TVGEVMSKNPVTVSPEKSVKQAAQLMHDRNVHRL 127

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+DD  + IGI+   D++R 
Sbjct: 128 PVLDDAGQVIGILTRGDIIRA 148



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  NP V+  +T L  A+++L +  IS L VVD+  K +GI+   DL+
Sbjct: 3   KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              +   V     +  A  ++ ++    + V+D+  ++ GI+T GDI R   
Sbjct: 99  MSKNPVTVSPEKSVKQAAQLMHDRNVHRLPVLDDAGQVIGILTRGDIIRAMA 150


>gi|227538024|ref|ZP_03968073.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
 gi|227242100|gb|EEI92115.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33300]
          Length = 491

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M    G  LAIA+ ++         +LH    +         V  S   +  
Sbjct: 45  NIPLVSAAMDTVTGSDLAIAIAQAGGIG-----MLHKNMTITEQAAEVRKVKRSESGMIQ 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I+SE + G + ++D   KL GI+T  D+   F KD+    + ++
Sbjct: 100 DPVTLLETATVGDAFKIMSEHKIGGIPIIDGSGKLVGIVTNRDLR--FQKDM-KRPISEL 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N  V  E T L  A  +L+ + I  L VV+D     G++ F D+ ++ 
Sbjct: 157 MTRDNLVVAPEGTDLVQAELILQNYKIEKLPVVNDEGLLKGLITFKDIQKYK 208


>gi|145591545|ref|YP_001153547.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283313|gb|ABP50895.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 139

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + D    + E + G   +VD+  K  GIITE D+     + L+       VM +N
Sbjct: 25  KRDDKIKDIAAKMYENKVGSAVIVDDEGKAIGIITERDLVYVIARGLSPDTPAWMVMTEN 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P VI +D L+  AM+ +R+ NI  L VVD   K +G+V F D++
Sbjct: 85  PIVIDQDALVVEAMEKMRELNIRHLPVVDKAGKVVGVVSFRDIV 128



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M +N      D  +      + ++ +   ++VDD  KAIGI+   DL+
Sbjct: 11  LRVSDIMTRNVVTAKRDDKIKDIAAKMYENKVGSAVIVDDEGKAIGIITERDLV 64



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              M   ++  ++     +++A+  + E     + VVD+  K+ G+++  DI
Sbjct: 76  PAWMVMTENPIVIDQDALVVEAMEKMRELNIRHLPVVDKAGKVVGVVSFRDI 127


>gi|218297198|ref|ZP_03497860.1| inosine-5'-monophosphate dehydrogenase [Thermus aquaticus Y51MC23]
 gi|218242475|gb|EED09014.1| inosine-5'-monophosphate dehydrogenase [Thermus aquaticus Y51MC23]
          Length = 494

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            V+H    + T       V  S      
Sbjct: 43  NIPILSAAMDTVTEADMAIAMAREGGLG-----VIHKNLSIETQASMVRKVKRSEAGMIQ 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E R G + VVD   KL G++T  D+   F +DL    V +V
Sbjct: 98  DPVTLPPTATLEDAERLMREYRIGGLPVVDLYGKLLGLVTNRDLR--FERDL-KRPVSEV 154

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A ++LR+H +  L +VD+  +  G++   D+++
Sbjct: 155 MTPLERLVTAPPGTTLEEAEEILRRHKVEKLPLVDEAGRLRGLLTLKDIVK 205


>gi|219850238|ref|YP_002464671.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aggregans DSM
           9485]
 gi|219544497|gb|ACL26235.1| inosine-5'-monophosphate dehydrogenase [Chloroflexus aggregans DSM
           9485]
          Length = 493

 Score =  108 bits (271), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL            ++H    +         V  S      
Sbjct: 46  NIPIVSAAMDTVTEHRLAIALAREGGIG-----IIHKNMPIEQQAEMVRKVKRSESGMIT 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ +++E +   V V      L GIIT  D+   F  D  T  + ++
Sbjct: 101 DPITLPPDRTVGDALDLMAEYKISGVPVTTADGDLIGIITNRDLR--FETD-RTRPIREL 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N   + E T L  A ++L +H I  ++VVD+  K  G++   D+++
Sbjct: 158 MTSRNLVTVPEGTTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMK 207



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 25/53 (47%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  ++  V  G  L +A  +L   R   V VVDE  KL G+IT  DI +   
Sbjct: 158 MTSRNLVTVPEGTTLEEAKEVLHRHRIEKVLVVDERGKLSGMITVKDIMKRIE 210


>gi|17231305|ref|NP_487853.1| hypothetical protein alr3813 [Nostoc sp. PCC 7120]
 gi|17132947|dbj|BAB75512.1| alr3813 [Nostoc sp. PCC 7120]
          Length = 152

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  +VK   PL +AI IL+E+R   + VVD   KL GII+E D+             
Sbjct: 9   MSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLMWQETGVTPPAYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           R+ HK L   +V +VM KNP  +  +  +  A QL+   N+  L
Sbjct: 69  MFLDSVIYLQNPAVYERDLHKALGQ-TVGEVMSKNPVTVSPEKSVKQAAQLMHDRNVHRL 127

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+DD  + IGI+   D++R 
Sbjct: 128 PVLDDAGQVIGILTRGDIIRA 148



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  NP V+  +T L  A+++L +  IS L VVD+  K +GI+   DL+
Sbjct: 3   KTVADVMSHNPVVVKPETPLQEAIKILAERRISGLPVVDNDGKLLGIISETDLM 56



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 23/52 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              +   V     +  A  ++ ++    + V+D+  ++ GI+T GDI R   
Sbjct: 99  MSKNPVTVSPEKSVKQAAQLMHDRNVHRLPVLDDAGQVIGILTRGDIIRAMA 150


>gi|22299345|ref|NP_682592.1| CBS domain-containing protein [Thermosynechococcus elongatus BP-1]
 gi|22295528|dbj|BAC09354.1| CBS domain protein [Thermosynechococcus elongatus BP-1]
          Length = 156

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 27/141 (19%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------- 273
           +   +   +    P+ +A+ ++ EK+   + VVD+  KL G+++E D+            
Sbjct: 8   YMTPNPFTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLIVREAPLEPPLY 67

Query: 274 -------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                         +FH+ L       V+DVM  NP  I  D  ++ A +L+  H+IS L
Sbjct: 68  ITFLGSIIYFESPESFHQHLKKTLGQQVQDVMTPNPHTINVDAPISEAARLMVNHHISRL 127

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V++D  + +GI+   DLLR 
Sbjct: 128 PVLNDQGELVGIISRHDLLRA 148



 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M  NP  I  D  ++ A++L+ +  +  L VVDD  K +G+V   DL+
Sbjct: 5   VRDYMTPNPFTISADAPISEAVRLMEEKQVRGLPVVDDKGKLVGLVSEADLI 56



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   + +  P+ +A  ++       + V+++  +L GII+  D+ R  H 
Sbjct: 99  MTPNPHTINVDAPISEAARLMVNHHISRLPVLNDQGELVGIISRHDLLRALHA 151


>gi|170289878|ref|YP_001736694.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170173958|gb|ACB07011.1| putative signal-transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 144

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIK 291
                + DA  ++ E R G V +VD   KLKGI+T+ D+     + L    +SV+++M +
Sbjct: 25  PENASVDDAFKVMWENRIGSVLIVDSDGKLKGIVTQRDLLYAGCRGLIGKNVSVKEIMSE 84

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           NP        L  A++ +R +++S L VVDD  + IGI    D++
Sbjct: 85  NPITAKPSDSLQEAVRRMRVNDVSHLPVVDDQGRPIGIFSMRDVI 129



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 36/62 (58%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K   +LS+ED M++NP  + E+  +  A +++ ++ I  +++VD   K  GIV   DLL 
Sbjct: 6   KRKASLSLEDFMVRNPISLPENASVDDAFKVMWENRIGSVLIVDSDGKLKGIVTQRDLLY 65

Query: 338 FG 339
            G
Sbjct: 66  AG 67



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G  G +    S      ++    K    L +A+  +       + VVD+  +  GI + 
Sbjct: 66  AGCRGLIGKNVSVKEIMSENPITAKPSDSLQEAVRRMRVNDVSHLPVVDDQGRPIGIFSM 125

Query: 270 GDI 272
            D+
Sbjct: 126 RDV 128


>gi|256810055|ref|YP_003127424.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793255|gb|ACV23924.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 418

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
            +V         +    P+IDA+  + E       +V++  KL GI+T+ DI     K  
Sbjct: 66  EEVASLMYKAHCIHEDTPVIDAVCEMLESGQRAAPIVNDEGKLVGIVTDYDIMARAAKSK 125

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    V  +M +N   I E+  +  A  L+R +NI  L+VVDD    IG+V  +D+L+ 
Sbjct: 126 IMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPIGMVTEVDILKK 185



 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +            ++  +     +  A  ++ +   G + VVD+     G++TE DI 
Sbjct: 124 SKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPIGMVTEVDIL 183

Query: 274 RNFHKDLNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   K    ++V +               +M      I  D     A +++++++I  + 
Sbjct: 184 KKVFKPKRKMTVGEFKGEKVPRMGQPVKIIMNTPLITISVDDTAADAARVMQEYDIRGVP 243

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV       GIV  LD++++
Sbjct: 244 VV-KGNALRGIVTRLDIIKY 262



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 8/58 (13%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG-----IVHFLDLL 336
            V+++M K+   +  DT ++ A+ ++ ++    L+VVD+     G     ++   DLL
Sbjct: 5   PVKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDNKD---GEEEYYLISIRDLL 59



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTL 283
               +  V    P+  A+ I+ E  F  + VVD  +G++   +I+  D+           
Sbjct: 10  MTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDNKDGEEEYYLISIRDL---LLATSTHE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M K    I EDT +  A+  + +       +V+D  K +GIV   D++
Sbjct: 67  EVASLMYKA-HCIHEDTPVIDAVCEMLESGQRAAPIVNDEGKLVGIVTDYDIM 118



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 62/184 (33%), Gaps = 24/184 (13%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE----NKSVVACHADIVLTL 162
           G++T  D++   + S    ++       +  +  +I I           +    +I   +
Sbjct: 110 GIVTDYDIMARAAKS----KIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLV 165

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             + E  P G          +   D L       R  +  +F     G K+  +      
Sbjct: 166 VVDDEGNPIG---------MVTEVDILKKVFKPKRKMTVGEF----KGEKVPRMGQPVKI 212

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M++      V       DA  ++ E     V VV +G  L+GI+T  DI +   +    
Sbjct: 213 IMNTPLITISV--DDTAADAARVMQEYDIRGVPVV-KGNALRGIVTRLDIIKYIAELKKG 269

Query: 283 LSVE 286
             +E
Sbjct: 270 AMIE 273


>gi|300772656|ref|ZP_07082526.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
 gi|300760959|gb|EFK57785.1| IMP dehydrogenase [Sphingobacterium spiritivorum ATCC 33861]
          Length = 491

 Score =  108 bits (270), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 73/172 (42%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M    G  LAIA+ ++         +LH    +         V  S   +  
Sbjct: 45  NIPLVSAAMDTVTGSDLAIAIAQAGGIG-----MLHKNMTITEQAAEVRKVKRSESGMIQ 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I+SE + G + ++D   KL GI+T  D+   F KD+    + ++
Sbjct: 100 DPVTLLETATVGDAFKIMSEHKIGGIPIIDGSGKLVGIVTNRDLR--FQKDM-KRPISEL 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N  V  E T L  A  +L+ + I  L VV++     G++ F D+ ++ 
Sbjct: 157 MTRDNLVVAPEGTDLVQAELILQNYKIEKLPVVNEEGLLKGLITFKDIQKYK 208


>gi|150025865|ref|YP_001296691.1| IMP dehydrogenase [Flavobacterium psychrophilum JIP02/86]
 gi|149772406|emb|CAL43886.1| IMP dehydrogenase [Flavobacterium psychrophilum JIP02/86]
          Length = 490

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+ +          VLH    +         V  +   + +
Sbjct: 45  NTPIVSAAMDTVTESAMAIAMAQEGGIG-----VLHKNMTIEQQAAKVRKVKRAESGMII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                 +   + DA   + E   G + +VDE + LKGI+T  D+   F K+  +  + ++
Sbjct: 100 DPVTLLMTATVADAKMAMKEFGIGGIPIVDENKTLKGIVTNRDLR--FEKN-GSRPIVEI 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   + E T L  A  +L+ H I  L V++   + +G++ F D+ + 
Sbjct: 157 MTKENLVTVAEGTSLQEAEVVLQGHKIEKLPVINHKNELVGLITFRDITKL 207


>gi|288817640|ref|YP_003431987.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobacter
           thermophilus TK-6]
 gi|288787039|dbj|BAI68786.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobacter
           thermophilus TK-6]
 gi|308751238|gb|ADO44721.1| inosine-5'-monophosphate dehydrogenase [Hydrogenobacter
           thermophilus TK-6]
          Length = 488

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            ++H    +         V  S   + L
Sbjct: 42  NIPIVSAAMDTVTESRLAIALAREGGIG-----IIHRNMSIEKQAQEVEKVKKSESGMIL 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I+   +   V VVD    L GI+T  D+ R          V   
Sbjct: 97  QPITVHPHNTVREAMQIMERYKISGVPVVDADGMLVGILTNRDL-RFLKTTDYDKPVSLF 155

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K       E   L  A ++L +H +  L +VD   +  G++   D+++
Sbjct: 156 MTKEGLITAQERVTLEEAEEILHRHKVEKLPIVDKEGRLRGLITIKDIVK 205


>gi|153809073|ref|ZP_01961741.1| hypothetical protein BACCAC_03381 [Bacteroides caccae ATCC 43185]
 gi|149128406|gb|EDM19625.1| hypothetical protein BACCAC_03381 [Bacteroides caccae ATCC 43185]
          Length = 492

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVRDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|29349253|ref|NP_812756.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253570401|ref|ZP_04847810.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_6]
 gi|298384793|ref|ZP_06994352.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_14]
 gi|29341161|gb|AAO78950.1| inosine-5'-monophosphate dehydrogenase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251840782|gb|EES68864.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_6]
 gi|298261937|gb|EFI04802.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 1_1_14]
          Length = 492

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+ T  ++ V
Sbjct: 100 DPVTIKRGSTVSDALGIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDM-TKHIDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|298490018|ref|YP_003720195.1| putative signal transduction protein with CBS domains ['Nostoc
           azollae' 0708]
 gi|298231936|gb|ADI63072.1| putative signal transduction protein with CBS domains ['Nostoc
           azollae' 0708]
          Length = 152

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  LV+   PL +AI IL+EKR   + V+D+  K+ GII+E D+             
Sbjct: 9   MSSNPILVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLMWQETGVTPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + +DL+     +V +VM K+P  I  D  L  A ++++++ +  L 
Sbjct: 69  MFLDSVIYLQNPGAYERDLHKALGQTVGEVMSKSPITITPDKPLKEAAKIIQEYKVHRLP 128

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D   + IGI+   D++R 
Sbjct: 129 VLDSTGQVIGILTRGDIIRA 148



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  NP ++  +T L  A+Q+L +  IS L V+DD  K +GI+   DL+
Sbjct: 3   KTVADVMSSNPILVRPETPLKEAIQILAEKRISGLPVIDDAGKVVGIISETDLM 56



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              S   +    PL +A  I+ E +   + V+D   ++ GI+T GDI R   
Sbjct: 99  MSKSPITITPDKPLKEAAKIIQEYKVHRLPVLDSTGQVIGILTRGDIIRAMA 150


>gi|268316879|ref|YP_003290598.1| inosine-5'-monophosphate dehydrogenase [Rhodothermus marinus DSM
           4252]
 gi|262334413|gb|ACY48210.1| inosine-5'-monophosphate dehydrogenase [Rhodothermus marinus DSM
           4252]
          Length = 504

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +         V  S   + +
Sbjct: 56  NIPLVSAAMDTVTEAEMAIAIAREGGVG-----VLHKNMTIERQAAEVRRVKRSESGMIM 110

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++    G + +VD+  KL GI+T  D+   F  D +   + +V
Sbjct: 111 DPITLHPDDTVADARRLMARYSIGGIPIVDQEGKLVGIVTNRDLR--FQTD-SQRPLREV 167

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M     V     T L  A ++L ++ I  L VVD+     G++ F D+
Sbjct: 168 MTSQGLVTAPVGTTLEEAERILEENKIEKLPVVDEKGYLKGLITFKDI 215


>gi|163755256|ref|ZP_02162376.1| putative inosine-5'-monophosphate dehydrogenase [Kordia algicida
           OT-1]
 gi|161324676|gb|EDP96005.1| putative inosine-5'-monophosphate dehydrogenase [Kordia algicida
           OT-1]
          Length = 491

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + +
Sbjct: 45  NVPIISAAMDTVTESAMAIAMAREGGIG-----VLHKNMTIERQAQKVRKVKRAESGMII 99

Query: 233 VKIGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VDE  KLKGI+T  D+   F  + N   + +V
Sbjct: 100 DPVTLPLTAIVADAKANMKEHSIGGIPIVDENGKLKGIVTNRDLR--FEHN-NQRPIVEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N     E T L  A  +L+++ I  L++VDD  K  G++ F D+ +
Sbjct: 157 MTSENLVTSSEGTSLKDAEAILQKNKIEKLLIVDDNYKLKGLITFRDITK 206



 Score = 36.4 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             G  L DA  IL + +   + +VD+  KLKG+IT  DI +   K +   
Sbjct: 166 SEGTSLKDAEAILQKNKIEKLLIVDDNYKLKGLITFRDITKVTQKPIANK 215


>gi|118475093|ref|YP_891788.1| inosine 5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
           fetus 82-40]
 gi|118414319|gb|ABK82739.1| inosine-5'-monophosphate dehydrogenase [Campylobacter fetus subsp.
           fetus 82-40]
          Length = 483

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NIPLVSAAMDTVTEHRTAIMMARLGGIG-----VIHKNMDIESQVKEVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + +A+ ++SE R   V VVD+   L GI+T  D+   F  D  T  V D 
Sbjct: 95  DPIFIKPNATIREALELMSEYRISGVPVVDDDNVLIGILTNRDLR--FENDF-TKQVSDA 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKPPLITAPKGCTLDDAEKIFSTNKVEKLPIVDESGRLEGLITIKDLKK 201


>gi|160882389|ref|ZP_02063392.1| hypothetical protein BACOVA_00338 [Bacteroides ovatus ATCC 8483]
 gi|237719062|ref|ZP_04549543.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
 gi|293369501|ref|ZP_06616080.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
           3f]
 gi|299148145|ref|ZP_07041207.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
 gi|156112202|gb|EDO13947.1| hypothetical protein BACOVA_00338 [Bacteroides ovatus ATCC 8483]
 gi|229451441|gb|EEO57232.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_2_4]
 gi|292635386|gb|EFF53899.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CMC
           3f]
 gi|298512906|gb|EFI36793.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_23]
          Length = 492

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|260172004|ref|ZP_05758416.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D2]
 gi|315920317|ref|ZP_07916557.1| conserved hypothetical protein [Bacteroides sp. D2]
 gi|313694192|gb|EFS31027.1| conserved hypothetical protein [Bacteroides sp. D2]
          Length = 492

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|146299973|ref|YP_001194564.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
           UW101]
 gi|146154391|gb|ABQ05245.1| inosine-5'-monophosphate dehydrogenase [Flavobacterium johnsoniae
           UW101]
          Length = 490

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 71/171 (41%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+ +          VLH    +         V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESAMAIAMAQEGGIG-----VLHKNMTIEQQAAKVRKVKRAEAGMII 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA   + E   G + +VDE + LKGI+T  D+   F K+     + +V
Sbjct: 100 DPVTLPTNSTIADAKNAMKEFGIGGIPIVDENKILKGIVTNRDLR--FEKN-GARPIAEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   + E T L  A  +L+ H I  L VV+   + +G++ F D+ + 
Sbjct: 157 MTSSNLVTVAEGTSLEQAEVVLQGHKIEKLPVVNAQNELVGLITFRDITKL 207


>gi|85373724|ref|YP_457786.1| CBS [Erythrobacter litoralis HTCC2594]
 gi|84786807|gb|ABC62989.1| CBS [Erythrobacter litoralis HTCC2594]
          Length = 147

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +         + +A  ++ +   G + VVD+   L G+IT+ DI          +  
Sbjct: 7   MTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRDIACRCVADGKSSDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           SVEDVM  +P  +  DT +      +  + +  L VVD+  K  GIV   D+ R
Sbjct: 67  SVEDVMTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDESGKCCGIVSQADIAR 120



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++VM  NP      T +  A  L+ +++   + VVDD    +G++   D+
Sbjct: 3   AKNVMTSNPACCNPSTSVREAANLMVKNDCGEIPVVDDSGTLVGVITDRDI 53



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              S   V     + D  + + + +   + VVDE  K  GI+++ DI R+ ++      V
Sbjct: 72  MTSSPITVTPDTSVDDCRSKMEDNKVRRLPVVDESGKCCGIVSQADIARHANEKETGDLV 131

Query: 286 EDV 288
            +V
Sbjct: 132 REV 134


>gi|255038186|ref|YP_003088807.1| inosine-5'-monophosphate dehydrogenase [Dyadobacter fermentans DSM
           18053]
 gi|254950942|gb|ACT95642.1| inosine-5'-monophosphate dehydrogenase [Dyadobacter fermentans DSM
           18053]
          Length = 490

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 71/172 (41%), Gaps = 17/172 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    L         V  S   + L
Sbjct: 45  NIPIVSAAMDTVTEFELAIAMAQEGGIG-----IIHKNMSLEAQAEQVRKVKRSESGMIL 99

Query: 233 VKIG----CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
             I       L +A  I+ E + G + V+D+  KL GI+T  D+   R   K      V 
Sbjct: 100 DPITLLDTATLGEAHQIMREFKIGGIPVIDKDHKLVGILTNRDLRFQREMAK-----PVT 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++M K N     E   L  A ++L+++ I  L +VD   +  G++ + D+L+
Sbjct: 155 EIMTKDNLVTASEGLSLDDAEKILQEYKIEKLPIVDADYRLTGLITYKDILK 206


>gi|110802266|ref|YP_699537.1| inosine 5'-monophosphate dehydrogenase [Clostridium perfringens
           SM101]
 gi|110682767|gb|ABG86137.1| inosine-5'-monophosphate dehydrogenase [Clostridium perfringens
           SM101]
          Length = 484

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSASMDTVTESKMAIAMAREGGIG-----IIHKNMTIEDQAREVDRVKRQENGVIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++++ R   V V  E  KL GIIT  DI    + D     V +V
Sbjct: 96  DPIFLSEDHTVREALDLMAQYRISGVPVTRE-GKLVGIITNRDIVFETNYD---KKVSEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+P     E T LT A+++L+QH I  L ++DD     G++   D+ +  
Sbjct: 152 MTKSPLVTAKEGTTLTEALEILKQHKIEKLPLIDDENNLKGLITIKDIEKAK 203


>gi|86153015|ref|ZP_01071220.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88596049|ref|ZP_01099286.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|157415319|ref|YP_001482575.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|85843900|gb|EAQ61110.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni HB93-13]
 gi|88190890|gb|EAQ94862.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|157386283|gb|ABV52598.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81116]
 gi|284926288|gb|ADC28640.1| inosine-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni IA3902]
 gi|307747961|gb|ADN91231.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni M1]
 gi|315927934|gb|EFV07256.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni DFVF1099]
 gi|315928759|gb|EFV08034.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 305]
 gi|315932194|gb|EFV11137.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 327]
          Length = 485

 Score =  108 bits (269), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|237714318|ref|ZP_04544799.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
 gi|262408151|ref|ZP_06084698.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
 gi|294645123|ref|ZP_06722848.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
           2a]
 gi|294809725|ref|ZP_06768412.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           SD CC 1b]
 gi|229445482|gb|EEO51273.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D1]
 gi|262353703|gb|EEZ02796.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_22]
 gi|292639547|gb|EFF57840.1| inosine-5'-monophosphate dehydrogenase [Bacteroides ovatus SD CC
           2a]
 gi|294443059|gb|EFG11839.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           SD CC 1b]
          Length = 492

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|255690566|ref|ZP_05414241.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
           17565]
 gi|260624027|gb|EEX46898.1| inosine-5'-monophosphate dehydrogenase [Bacteroides finegoldii DSM
           17565]
          Length = 492

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 72/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+ T  ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDM-TKHIDLV 156

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKEKLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|283956455|ref|ZP_06373935.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 1336]
 gi|283792175|gb|EFC30964.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 1336]
          Length = 485

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|86150453|ref|ZP_01068678.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|86151096|ref|ZP_01069312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|121613583|ref|YP_001000738.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|218562674|ref|YP_002344453.1| inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315124546|ref|YP_004066550.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
 gi|85839048|gb|EAQ56312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|85842266|gb|EAQ59512.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 260.94]
 gi|87249094|gb|EAQ72055.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 81-176]
 gi|112360380|emb|CAL35176.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni NCTC 11168]
 gi|315018268|gb|ADT66361.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni ICDCCJ07001]
          Length = 485

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|295088063|emb|CBK69586.1| inosine-5'-monophosphate dehydrogenase [Bacteroides xylanisolvens
           XB1A]
          Length = 492

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|298480172|ref|ZP_06998370.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
 gi|298273453|gb|EFI15016.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. D22]
          Length = 492

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 71/173 (41%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+            V+H    +       + V         
Sbjct: 45  KIPFVTAAMDTVTEAKMAIAIAREGGIG-----VIHKNMSIEEQARQVAIVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K G  + DA+ I++E + G + VVD+   L GI+T  D+   F +D+    ++ V
Sbjct: 100 DPVTIKRGSTVQDALDIMAEYKIGGIPVVDDEGYLVGIVTNRDLR--FERDMAKH-IDLV 156

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M          + T L  A Q+L++H I  L +V    K IG+V + D+ +  
Sbjct: 157 MTPKERLVTTNQSTDLESAAQILQKHKIEKLPIVGMDGKLIGLVTYKDITKAK 209


>gi|148926035|ref|ZP_01809721.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8486]
 gi|145845514|gb|EDK22606.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8486]
          Length = 445

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-- 232
           P  SA M        AI +            V+H    + +       V  S   + +  
Sbjct: 2   PLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVIIDP 56

Query: 233 --VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D +  SVE+VM 
Sbjct: 57  IFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSN-SVENVMT 113

Query: 291 KNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 114 KMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 161


>gi|205355813|ref|ZP_03222582.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8421]
 gi|205346247|gb|EDZ32881.1| Inosine 5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni CG8421]
          Length = 485

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D +  SVE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSN-SVENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|156740229|ref|YP_001430358.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus castenholzii
           DSM 13941]
 gi|156231557|gb|ABU56340.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus castenholzii
           DSM 13941]
          Length = 507

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P TSA M       LAIAL             +H    +         V  S   +  
Sbjct: 63  NIPITSAAMDTVTEHRLAIALAREGGVG-----FIHKNMPIEAQAEMVRKVKRSESGMIT 117

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ +++E R   + +      L GI+T  D+   F  D  +  + D+
Sbjct: 118 DPITMGPDKTVGDALDLMAEYRISGIPITTPDGDLIGIVTNRDLR--FETD-RSRPIRDL 174

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N   + E T L  A Q+L +H I  L+VVD   K  G++   D+++
Sbjct: 175 MTTRNLITVPEGTTLEQAKQILHEHRIEKLLVVDRRGKLSGMITVKDIMK 224



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 25/56 (44%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + +  ++  V  G  L  A  IL E R   + VVD   KL G+IT  DI +   
Sbjct: 172 RDLMTTRNLITVPEGTTLEQAKQILHEHRIEKLLVVDRRGKLSGMITVKDIMKQIE 227


>gi|153952446|ref|YP_001397822.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939892|gb|ABS44633.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 485

 Score =  107 bits (268), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|284162498|ref|YP_003401121.1| hypothetical protein Arcpr_1399 [Archaeoglobus profundus DSM 5631]
 gi|284012495|gb|ADB58448.1| protein of unknown function DUF39 [Archaeoglobus profundus DSM
           5631]
          Length = 492

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              V         VK    + +   I+ +     + VVD+  +L GI+T  DI +     
Sbjct: 372 VKVVKSVMTRAITVKPDTSVEEVAKIIIQNNVNHLPVVDDEGRLVGIVTSWDIAKAVAMG 431

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V+DVM +     L D  +  A + + +HNIS L VVD   + +G+V   DL + 
Sbjct: 432 KMG-KVKDVMTRKVITALPDEPVESAARKMEKHNISALPVVDAKMRVLGLVTSEDLSKL 489



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              P+  A   + +     + VVD   ++ G++T  D+ +   +
Sbjct: 449 PDEPVESAARKMEKHNISALPVVDAKMRVLGLVTSEDLSKLLAR 492


>gi|260893008|ref|YP_003239105.1| inosine-5'-monophosphate dehydrogenase [Ammonifex degensii KC4]
 gi|260865149|gb|ACX52255.1| inosine-5'-monophosphate dehydrogenase [Ammonifex degensii KC4]
          Length = 489

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/197 (21%), Positives = 75/197 (38%), Gaps = 17/197 (8%)

Query: 151 VVACHADIVLTLPKEPESCPHGLA----PTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           ++   A  VL    +  +          P  SA M       +AIAL            V
Sbjct: 17  LLVPAASAVLPREVDTSTYFTNNIKLNIPIVSAAMDTVTEARMAIALAREGGIG-----V 71

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +H    +    +    V  S   +            + +A+ ++   R   V +V++  K
Sbjct: 72  IHKNMSIERQALEVDKVKRSEHGVITDPFHLGPDNTVREAMELMERYRISGVPIVEKNGK 131

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           L GIIT  DI   F  + +   +++VM K N       T L  A +++R++ I  L +VD
Sbjct: 132 LVGIITNRDIR--FETNFDQ-PIKNVMTKENLITAPVGTTLEKAKEIMRRYKIEKLPLVD 188

Query: 322 DCQKAIGIVHFLDLLRF 338
           +     G++   D+ + 
Sbjct: 189 ENFILRGLITIKDIEKA 205


>gi|46198372|ref|YP_004039.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
 gi|46195994|gb|AAS80412.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
          Length = 493

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            V+H    +         V  S      
Sbjct: 43  NIPILSAAMDTVTEAEMAIAMAREGGLG-----VIHKNLSIEAQAAMVRKVKRSEAGMIQ 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E R G + VVD   +L G++T  D+   F +DL    V +V
Sbjct: 98  DPVTLPPTATLEDAERLMREYRIGGLPVVDVYGRLLGLVTNRDLR--FERDL-KRPVTEV 154

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A +LLR+H +  L +VD+  +  G++   D+++
Sbjct: 155 MTPVERLVTARPGTTLEEAEELLRRHKVEKLPLVDESGRLKGLITLKDIVK 205



 Score = 36.0 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            ++VM   + +   + G  L +A  +L   +   + +VDE  +LKG+IT  DI + 
Sbjct: 151 VTEVMTPVERLVTARPGTTLEEAEELLRRHKVEKLPLVDESGRLKGLITLKDIVKR 206


>gi|269928381|ref|YP_003320702.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus
           DSM 20745]
 gi|269787738|gb|ACZ39880.1| inosine-5'-monophosphate dehydrogenase [Sphaerobacter thermophilus
           DSM 20745]
          Length = 511

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            +LH    +         V  S   + +
Sbjct: 63  KIPIVSAAMDTVTEGRMAIAMAREGGIG-----ILHRNMSIEEQVAEVDKVKRSESGMIV 117

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++   P+ +A+ +++      V + DE  KL GI+T  D+   F  D+N   + ++
Sbjct: 118 EPVTLQPDDPVSEALAVMAHYHISGVPITDEHGKLVGILTNRDLR--FETDVNQ-PIANL 174

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N   +   T L  A ++L QH I  L VVD+     G++   D+ +
Sbjct: 175 MTKENLITVPVGTTLEQAEEILHQHKIEKLPVVDEHGYLKGLITVKDIQK 224



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++  V +G  L  A  IL + +   + VVDE   LKG+IT  DI +   
Sbjct: 175 MTKENLITVPVGTTLEQAEEILHQHKIEKLPVVDEHGYLKGLITVKDIQKRIQ 227


>gi|55980401|ref|YP_143698.1| IMP dehydrogenase/GMP reductase [Thermus thermophilus HB8]
 gi|55771814|dbj|BAD70255.1| 'IMP dehydrogenase/GMP reductase [Thermus thermophilus HB8]
          Length = 493

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            V+H    +         V  S      
Sbjct: 43  NIPILSAAMDTVTEAEMAIAMAREGGLG-----VIHKNLSIEAQAAMVRKVKRSEAGMIQ 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E R G + VVD   +L G++T  D+   F +DL    V +V
Sbjct: 98  DPVTLPPTATLEDAERLMREYRIGGLPVVDVYGRLLGLVTNRDLR--FERDL-KRPVTEV 154

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A +LLR+H +  L +VD+  +  G++   D+++
Sbjct: 155 MTPVERLVTARPGTTLEEAEELLRRHKVEKLPLVDESGRLKGLITLKDIVK 205



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            ++VM   + +   + G  L +A  +L   +   + +VDE  +LKG+IT  DI + 
Sbjct: 151 VTEVMTPVERLVTARPGTTLEEAEELLRRHKVEKLPLVDESGRLKGLITLKDIVKR 206


>gi|288932303|ref|YP_003436363.1| hypothetical protein Ferp_1951 [Ferroglobus placidus DSM 10642]
 gi|288894551|gb|ADC66088.1| protein of unknown function DUF39 [Ferroglobus placidus DSM 10642]
          Length = 493

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     + +A  IL E     + VV+E  +L GI+T  DI R   +      V
Sbjct: 379 MSSPPITISPEASIEEAAKILIENEIDHLPVVNEKGELIGIVTSWDIARAVARG-KVGKV 437

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ED+M +       +  + +A + + QHNIS L VVD   + +G+V   DL + 
Sbjct: 438 EDIMTRKVITTTMEEPIEIAARKMEQHNISALPVVDKDNRVVGVVSSEDLSKL 490



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+ VM   P  I  +  +  A ++L ++ I  L VV++  + IGIV   D+ R 
Sbjct: 375 VKSVMSSPPITISPEASIEEAAKILIENEIDHLPVVNEKGELIGIVTSWDIARA 428



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 20/41 (48%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           P+  A   + +     + VVD+  ++ G+++  D+ +   +
Sbjct: 453 PIEIAARKMEQHNISALPVVDKDNRVVGVVSSEDLSKLLAR 493


>gi|57237943|ref|YP_179191.1| inositol-5-monophosphate dehydrogenase [Campylobacter jejuni
           RM1221]
 gi|57166747|gb|AAW35526.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni
           RM1221]
 gi|315058500|gb|ADT72829.1| Inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni S3]
          Length = 485

 Score =  107 bits (267), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDITSQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V VVDE +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVSPKASVAEALEIMAEYRISGVPVVDEDKKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|283954622|ref|ZP_06372140.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 414]
 gi|283793814|gb|EFC32565.1| inosine-5'-monophosphate dehydrogenase [Campylobacter jejuni subsp.
           jejuni 414]
          Length = 485

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NIPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+ I++E R   V VVDE QKL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVNPKASVAKALEIMAEYRISGVPVVDENQKLIGILTNRDLR--FESDFSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  +  G++   DL +
Sbjct: 152 MTKMPLITAPKGCTLDDAEKIFSTNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|170290719|ref|YP_001737535.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174799|gb|ACB07852.1| putative signal-transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 144

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
                  +K+   + +A  I+ EKR   + VVD   KL GI T+ D+            +
Sbjct: 18  MTTPAVTIKMDASVEEAAKIMDEKRISSILVVDNNGKLVGIFTDRDLRFAAANGKIGKGI 77

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +M +NP  I  +  +T A++ +R  ++  L VVD   K +G++   D+L  
Sbjct: 78  PIHMLMTENPITIAPNEPITEALRKMRDADVKHLPVVDKENKPVGVIAVRDVLDA 132



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F++ D       GK+G         M   ++   +    P+ +A+  + +     + VVD
Sbjct: 59  FTDRDLRFAAANGKIGKG---IPIHMLMTENPITIAPNEPITEALRKMRDADVKHLPVVD 115

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS 284
           +  K  G+I   D+       +  ++
Sbjct: 116 KENKPVGVIAVRDVLDAVMMLMQLMT 141


>gi|315427061|dbj|BAJ48677.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428125|dbj|BAJ49711.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 151

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  K    +              +V     + +A   + +   G + V+D+   L GIIT
Sbjct: 8   PVFKRSVRYSPVKASDLMSYPPVVVSEDATVEEAAKTMWDNGVGSILVLDKDGTLVGIIT 67

Query: 269 EGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           E DI       L    L    +M KN      D  +   ++ ++  NI  + VVD   K 
Sbjct: 68  ERDILYAASHLLLGKDLKARSLMSKNLVTASPDEDVASVLEKMKDFNIRHIPVVDQEGKP 127

Query: 327 IGIVHFLDLLRFGI 340
           +G++   D+L FG+
Sbjct: 128 LGVLSSRDILDFGV 141


>gi|296109088|ref|YP_003616037.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433902|gb|ADG13073.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 404

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 2/118 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
            +V         +    P+IDA+  + +       +V+   K+ GI+T+ DI     +  
Sbjct: 66  EEVARLMYKAHCIHEDTPIIDAVCEMIDAGQRAAPIVNTYGKMVGIVTDYDIMDRASRSI 125

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L    V+ VM ++   I E+  +  A  L+R +NI  L+VVDD  K +GIV   D+L
Sbjct: 126 ILKDTPVKKVMTRHVITINENETIGKARALMRDNNIGRLVVVDDDGKPVGIVTETDIL 183



 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 50/128 (39%), Gaps = 16/128 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRNFH 277
               +  +     +  A  ++ +   G + VVD+  K  GI+TE DI         R   
Sbjct: 136 MTRHVITINENETIGKARALMRDNNIGRLVVVDDDGKPVGIVTETDILTKVLKPKRRMRA 195

Query: 278 KDLN-------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            DL           V+ +M      +  D  +  A +L+++++I  + +V       GI+
Sbjct: 196 GDLKGEKVPRMGQPVKMIMSSPLITLDYDASVADAARLMKEYDIRGVPIV-KGNMLKGII 254

Query: 331 HFLDLLRF 338
              D+ ++
Sbjct: 255 TRSDIAKY 262



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 8/62 (12%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI-----VHFLD 334
           +    ++++M K+   +  DT ++ A+ ++ ++N   L+VVD      G+     +   D
Sbjct: 1   MFNEPIKEIMTKDVVTVTPDTSVSKALGIMEENNFHHLVVVDKKD---GVEEYYLISMRD 57

Query: 335 LL 336
           LL
Sbjct: 58  LL 59



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG--IITEGDIFRNFHKDLNTL 283
               +  V     +  A+ I+ E  F  + VVD+   ++   +I+  D+           
Sbjct: 10  MTKDVVTVTPDTSVSKALGIMEENNFHHLVVVDKKDGVEEYYLISMRDL---LLAHNPEE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M K    I EDT +  A+  +         +V+   K +GIV   D++
Sbjct: 67  EVARLMYKA-HCIHEDTPIIDAVCEMIDAGQRAAPIVNTYGKMVGIVTDYDIM 118



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 24/184 (13%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE----NKSVVACHADIVLTL 162
           G++T  D++   S S     +       +  +  +I I           +    +I   +
Sbjct: 110 GIVTDYDIMDRASRS----IILKDTPVKKVMTRHVITINENETIGKARALMRDNNIGRLV 165

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
             + +  P G+             D L   L   R     D      G K+  +      
Sbjct: 166 VVDDDGKPVGIV---------TETDILTKVLKPKRRMRAGDL----KGEKVPRMGQPVKM 212

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +M S      +     + DA  ++ E     V +V +G  LKGIIT  DI +        
Sbjct: 213 IMSSPLIT--LDYDASVADAARLMKEYDIRGVPIV-KGNMLKGIITRSDIAKYIADLKKG 269

Query: 283 LSVE 286
             +E
Sbjct: 270 AMIE 273


>gi|330835092|ref|YP_004409820.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567231|gb|AEB95336.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 164

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 55/121 (45%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  +    +   I +V+    ++ A T +     G + VVD   ++ GI+TE D+ R   
Sbjct: 1   MTRTVSEVANKIIRVVREEDTIVSAATEMKNHNIGSMLVVDNQGQIVGIVTERDVVRAMA 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+D M  + K + E+T +  A+ ++ ++    L V+    K IGIV   DL R
Sbjct: 61  DRRLDGKVKDYMTSSVKGVTEETSVEEAVGIMLENGFRHLPVIGKEGKVIGIVSIRDLAR 120

Query: 338 F 338
            
Sbjct: 121 A 121



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           V     + +A+ I+ E  F  + V+ +  K+ GI++  D+ R    +
Sbjct: 79  VTEETSVEEAVGIMLENGFRHLPVIGKEGKVIGIVSIRDLARALSDN 125


>gi|15922679|ref|NP_378348.1| hypothetical protein ST2348 [Sulfolobus tokodaii str. 7]
 gi|15623469|dbj|BAB67457.1| 133aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 133

 Score =  106 bits (266), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/107 (38%), Positives = 54/107 (50%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     L D   +++EK  G V VVD G K  GIITE DI +   K  +     E+ M  
Sbjct: 17  VTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I ED+ +T A+ L+RQ NI  L VVDD     GI+   D+ R 
Sbjct: 76  SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRA 122



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      + +D  L    +++ + NI  ++VVD   K +GI+   D+++ 
Sbjct: 6   VKEYMKTQVISVTKDAKLNDIAKVMTEKNIGSVIVVD-GNKPVGIITERDIVKA 58



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           ++   P+  A+ ++ +     + VVD+   LKGII+  DI R       T+
Sbjct: 80  IREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDMFETM 130


>gi|315638129|ref|ZP_07893312.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           JV21]
 gi|315481809|gb|EFU72430.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           JV21]
          Length = 484

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +         V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----IIHKNMDIKAQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ +++E R   V VVDE +KL GI+T  D+   F  + N   VE+V
Sbjct: 95  DPIFIAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDLR--FESNFNN-RVENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+  + +G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVDENNRLVGLITIKDLKK 201



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            + F    + + +   +     GC L DA  I S  +   + +VDE  +L G+IT  D+ 
Sbjct: 141 ESNFNNRVENVMTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVDENNRLVGLITIKDLK 200

Query: 274 RN 275
           + 
Sbjct: 201 KR 202


>gi|294507509|ref|YP_003571567.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
 gi|294343837|emb|CBH24615.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
          Length = 508

 Score =  106 bits (265), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            VLH    +         V  S + + L
Sbjct: 55  NVPVLSAAMDTVTEADMAIALARQGG-----AGVLHKSMSIEDQAAEVRRVKRSENGMIL 109

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  +++    G + VVDE  KL GI+T  D+      D     + ++
Sbjct: 110 DPITISPHDTVADARNMMAHYSIGGIPVVDESDKLVGIVTNRDVRFELEGD---TPIREM 166

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +    +   T L  A+++L+ H +  L VVD+     G++ F D+ +
Sbjct: 167 MTADDLVTVPVGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRK 216



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           M + D +  V +G  L +AI IL   +   + VVDE   LKG+IT  DI + 
Sbjct: 166 MMTADDLVTVPVGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRKR 217


>gi|11498786|ref|NP_070015.1| hypothetical protein AF1186 [Archaeoglobus fulgidus DSM 4304]
 gi|2649397|gb|AAB90057.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 491

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 196 SRNFSENDFYVLHPGGKLGT-------LFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
            R     +F +  P  ++ T              V         +     + +A  I+ +
Sbjct: 341 KRQIERGEFLLTAPVDRIPTKEVFKPMRQREVKVVKSVMVEAYTISPETAIEEAARIMMD 400

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K    + VV E  +L GIIT  DI +   ++    +V+ +M +N      D  + VA + 
Sbjct: 401 KGINHIPVV-EEGRLVGIITSWDIAKAVARN-RKGAVKSIMTRNVIYTHPDEPVEVAARK 458

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + Q+NIS L VVD  ++ +GIV   DL + 
Sbjct: 459 MEQNNISALPVVDSRKRVLGIVTSEDLSKL 488



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               P+  A   + +     + VVD  +++ GI+T  D+ +   +
Sbjct: 447 HPDEPVEVAARKMEQNNISALPVVDSRKRVLGIVTSEDLSKLIAR 491


>gi|295694695|ref|YP_003587933.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912]
 gi|295410297|gb|ADG04789.1| inosine-5'-monophosphate dehydrogenase [Bacillus tusciae DSM 2912]
          Length = 485

 Score =  106 bits (265), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLMSAGMDTVTEAKMAIAMAREGGIG-----IIHKNMSIAKQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A  ++++ R   V +VDE  +L GIIT  D+   F ++ + L + +V
Sbjct: 98  DPIYLTPDHSVAEAEQLMAKYRISGVPIVDEKGRLVGIITNRDLR--FEQNHSRL-IAEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A ++L++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTKENLVTAPVGTTLEEAKRILQEHKIEKLPLVDDQYMLRGLITIKDIEKA 205


>gi|261402971|ref|YP_003247195.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369964|gb|ACX72713.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 418

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +V         +    P++DA+  + +       +V+   K+ GIIT+ DI     +
Sbjct: 64  TDEEVRSLMYKAHCIHEDTPVLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIMARVAR 123

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +    V  +M +N   I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L
Sbjct: 124 SKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 183

Query: 337 RF 338
           + 
Sbjct: 184 KK 185



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +            ++  +     +  A  ++ +   G + VVD+     G++TE DI 
Sbjct: 124 SKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 183

Query: 274 RNFHKDLNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   K    ++  D               +M      I  D     A +++++++I  + 
Sbjct: 184 KKVFKPKRKMTAGDFKGEKVPRMGQPVKLIMNTPLITIDADASAADAARVMQEYDIRGVP 243

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV   +   GIV  LD++++
Sbjct: 244 VV-KGKSLKGIVTRLDIIKY 262



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 8/58 (13%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG-----IVHFLDLL 336
            V+++M +    +  DT ++ A+ ++ ++    L+VVD      G     ++   DLL
Sbjct: 5   PVKEIMTREVVTVSPDTPVSKALGIMEENGFHHLIVVDKKD---GKEEYYLISMRDLL 59



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTL 283
               +  V    P+  A+ I+ E  F  + VVD  +G++   +I+  D+      D    
Sbjct: 10  MTREVVTVSPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRDLLLASSTDEE-- 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M K    I EDT +  A+  +         +V++  K +GI+   D++
Sbjct: 68  -VRSLMYKA-HCIHEDTPVLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIM 118


>gi|83814923|ref|YP_445619.1| inosine-5'-monophosphate dehydrogenase [Salinibacter ruber DSM
           13855]
 gi|83756317|gb|ABC44430.1| inosine-5'-monophosphate dehydrogenase [Salinibacter ruber DSM
           13855]
          Length = 508

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            VLH    +         V  S + + L
Sbjct: 55  NVPVLSAAMDTVTEADMAIALARQGG-----AGVLHKSMSIEDQAAEVRRVKRSENGMIL 109

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  +++    G + VVDE  KL GI+T  D+      D     + ++
Sbjct: 110 DPITISPHDTVADARNMMAHYSIGGIPVVDESDKLVGIVTNRDVRFELDGD---TPIREM 166

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +    +   T L  A+++L+ H +  L VVD+     G++ F D+ +
Sbjct: 167 MTADDLVTVPVGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRK 216



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 28/52 (53%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           M + D +  V +G  L +AI IL   +   + VVDE   LKG+IT  DI + 
Sbjct: 166 MMTADDLVTVPVGTTLDEAIEILQAHKVEKLPVVDEEGYLKGLITFKDIRKR 217


>gi|113475881|ref|YP_721942.1| signal transduction protein [Trichodesmium erythraeum IMS101]
 gi|110166929|gb|ABG51469.1| putative signal transduction protein with CBS domains
           [Trichodesmium erythraeum IMS101]
          Length = 153

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   VK   PL +AI IL+EK    + VVD+  KL GI++E D+             
Sbjct: 10  MSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLMWQESGVTPPPYI 69

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + K+++     +VE++M KNP        L+   +L+ + +I  L 
Sbjct: 70  MLLDSIIFLENPGRYEKEIHKALGETVEEIMTKNPLTTRSQERLSATAKLMNERSIHRLP 129

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD+  K IGI+   D++R 
Sbjct: 130 VVDENGKVIGILTRGDIIRA 149



 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    V +VM  NP  +   T L  A+++L + +IS L VVDD  K +GIV   DL+
Sbjct: 1   MTNKIVSEVMSSNPITVKPKTPLKEAIKILAEKHISGLPVVDDNGKLVGIVSETDLM 57



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 14/41 (34%), Positives = 22/41 (53%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           L     +++E+    + VVDE  K+ GI+T GDI R    +
Sbjct: 113 LSATAKLMNERSIHRLPVVDENGKVIGILTRGDIIRAMAAE 153


>gi|224372738|ref|YP_002607110.1| inosine 5'-monophosphate dehydrogenase [Nautilia profundicola AmH]
 gi|223588344|gb|ACM92080.1| inosine-5'-monophosphate dehydrogenase [Nautilia profundicola AmH]
          Length = 482

 Score =  106 bits (264), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 37/137 (27%), Positives = 55/137 (40%), Gaps = 8/137 (5%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           H    + T       V  S   I +    V     +  A+ I++  R   V VVD   KL
Sbjct: 70  HKNMDIETQAKEVEKVKKSESGIIIDPVKVFPDDTIAKALDIMATYRISGVPVVDRDGKL 129

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            GI+T  D+   F K+     V+D+M   P     E   L  A  +L QH I  L ++DD
Sbjct: 130 VGILTNRDLR--FEKNTTRF-VKDLMTPMPLITAKEGISLEEAEDILHQHKIEKLPIIDD 186

Query: 323 CQKAIGIVHFLDLLRFG 339
                G++   D+ +  
Sbjct: 187 NGYLKGLITIKDIQKKK 203


>gi|224056130|ref|XP_002298732.1| predicted protein [Populus trichocarpa]
 gi|222845990|gb|EEE83537.1| predicted protein [Populus trichocarpa]
          Length = 236

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 31/158 (19%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             +      D M   + + +VK    + +A+  L EKR     V+D+  +L G++++ D+
Sbjct: 70  ARSGIYTVGDFMTKKEGLYVVKANTTVDEALEALVEKRITGFPVIDDDWRLVGVVSDYDL 129

Query: 273 F------------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
                                          +   K+   L V D+M  NP V+ E T L
Sbjct: 130 LALDSISGGCQNDTNLFPNVDSSWKTFNELQKLLIKNNGKL-VGDLMTPNPLVVYETTNL 188

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             A++LL +     L VVDD  K +GI+   D++R  +
Sbjct: 189 EDAVRLLLETKYRRLPVVDDDGKLVGIITRGDIVRAAL 226


>gi|302871598|ref|YP_003840234.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           obsidiansis OB47]
 gi|302574457|gb|ADL42248.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           obsidiansis OB47]
          Length = 488

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   ++DV
Sbjct: 99  DPFYLSPENKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKDV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTASNLITAKEGITLEEAKEIMKKHKIEKLPIVDDDGNLKGLITIKDIEKA 205



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 152 KDVMTASNLITAKEGITLEEAKEIMKKHKIEKLPIVDDDGNLKGLITIKDIEKAV 206


>gi|154248815|ref|YP_001409640.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
           Rt17-B1]
 gi|154152751|gb|ABS59983.1| inosine-5'-monophosphate dehydrogenase [Fervidobacterium nodosum
           Rt17-B1]
          Length = 508

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 14/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LA AL            ++H    +         V  + +    
Sbjct: 62  NIPLVSAAMDTVTESELAKALAREGGIG-----IIHKNLSIKEQAHQVEIVKRTENGVIE 116

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +  ++     + +A+ +++E + G   VVD+   L G++T  D+   F  D++   V+++
Sbjct: 117 NPVVIHPNDTIFNALKLMAEYKIGGFPVVDDEGYLVGLLTNRDVR--FESDVSK-KVKEL 173

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M       V L    L  A Q+L +H I  L +VDD  K IG++   D+L
Sbjct: 174 MTPREKLVVALPGISLEKAKQILHEHRIEKLPIVDDKNKLIGLITIKDVL 223



 Score = 39.1 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 45/235 (19%), Positives = 75/235 (31%), Gaps = 41/235 (17%)

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS----GSSDELK 128
           GKSG    K A    S    + F    EA       +T DD+++V  +S      +D   
Sbjct: 4   GKSG---KKSAKRENSIKVKATFEQFDEA-------LTFDDVLLVPQYSEVLPSDTDVST 53

Query: 129 AILYYARRFSIPLIAITSEN------KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            +    +  +IPL++   +          +A    I +                      
Sbjct: 54  RLTRQIK-LNIPLVSAAMDTVTESELAKALAREGGIGIIHKNLSIKEQAHQVEIVKRTEN 112

Query: 183 LAIGDALAI--------ALLESRNFSENDFYVLHPGGKL------------GTLFVCASD 222
             I + + I        AL     +    F V+   G L              +     +
Sbjct: 113 GVIENPVVIHPNDTIFNALKLMAEYKIGGFPVVDDEGYLVGLLTNRDVRFESDVSKKVKE 172

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +M   + + +   G  L  A  IL E R   + +VD+  KL G+IT  D+     
Sbjct: 173 LMTPREKLVVALPGISLEKAKQILHEHRIEKLPIVDDKNKLIGLITIKDVLSVIE 227


>gi|149195257|ref|ZP_01872346.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus
           TB-2]
 gi|149134599|gb|EDM23086.1| inositol-5-monophosphate dehydrogenase [Caminibacter mediatlanticus
           TB-2]
          Length = 482

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 16/211 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I   A+T E+  +V  +++++   + +            P  SA M        AIAL
Sbjct: 1   MRIKYKALTFEDVLLVPKYSEVLPKQVDITTRFTKNVTLNIPIVSAAMDTVTESRAAIAL 60

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEK 249
                       V+H    + +       V  S   I +    V     L  A  I++  
Sbjct: 61  ARLGGVG-----VIHKNMDITSQAKEVEKVKKSESGIIIDPVKVFPDDTLAKAENIMATY 115

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           +   V VVD   KL GI+T  D+   F KD +   V+DVM K P     E   L  A Q+
Sbjct: 116 KISGVPVVDNSGKLVGILTNRDMR--FEKDYSK-KVKDVMTKMPLITAKEGITLEEAEQI 172

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L ++ I  L ++D      G++   D+ +  
Sbjct: 173 LHKNKIEKLPIIDKNGYLKGLITIKDIQKKK 203


>gi|163797469|ref|ZP_02191420.1| IMP dehydrogenase [alpha proteobacterium BAL199]
 gi|159177218|gb|EDP61777.1| IMP dehydrogenase [alpha proteobacterium BAL199]
          Length = 486

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M       LAIA+ ++         V+H    +         V      + + 
Sbjct: 40  IPLMSAAMDTVTESRLAIAMAQAGGIG-----VVHKNLDIAAQANEVRAVKKFEAGMVIN 94

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +     L +A+ ++       + VV     +L GI+T  D+       +    V D+
Sbjct: 95  PLTIHPEATLAEALDLMQRHGINGIPVVRRRDNRLVGILTHRDVRFA---KVMNQPVRDL 151

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K      ED     A +LL +H I  L+VVDD ++ +G++   D+ + 
Sbjct: 152 MTKRVITAREDVSADEARELLHKHRIEKLLVVDDDRRCVGLITVKDMEKA 201



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRFGII 341
           M+ NP  I  +  L  A+ L+++H I+ + VV     + +GI+   D+    ++
Sbjct: 91  MVINPLTIHPEATLAEALDLMQRHGINGIPVVRRRDNRLVGILTHRDVRFAKVM 144


>gi|148654858|ref|YP_001275063.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus sp. RS-1]
 gi|148566968|gb|ABQ89113.1| inosine-5'-monophosphate dehydrogenase [Roseiflexus sp. RS-1]
          Length = 490

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P TSA M       LAIAL             +H    +         V  S   +  
Sbjct: 46  NIPITSAAMDTVTEHRLAIALAREGGVG-----FIHKNMSIEAQAEMVRKVKRSESGMIT 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ +++E R   + +      L GI+T  D+   F  D  +  + D+
Sbjct: 101 DPITMGPDKTVGDALDLMAEYRISGIPITTPDGDLIGIVTNRDLR--FETD-RSRPIRDL 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N   + E T L  A ++L  H I  L+VVD   K  G++   D+++
Sbjct: 158 MTTRNLITVPEGTTLEQAKEILHAHRIEKLLVVDRRGKLSGMITVKDIMK 207



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 24/56 (42%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + +  ++  V  G  L  A  IL   R   + VVD   KL G+IT  DI +   
Sbjct: 155 RDLMTTRNLITVPEGTTLEQAKEILHAHRIEKLLVVDRRGKLSGMITVKDIMKQIE 210


>gi|149372552|ref|ZP_01891664.1| putative inosine-5'-monophosphate dehydrogenase [unidentified
           eubacterium SCB49]
 gi|149354595|gb|EDM43159.1| putative inosine-5'-monophosphate dehydrogenase [unidentified
           eubacterium SCB49]
          Length = 490

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   +  
Sbjct: 45  NVPIVSAAMDTVTESAMAIAMAREGGIG-----VLHKNMTIEQQAAEVRKVKRAESGMIQ 99

Query: 233 VKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + DA + + E   G + ++D+   L GI+T  D+   F K+  +  + ++
Sbjct: 100 DPVTLHKENTVGDAQSTMREYSIGGIPIIDKDGLLVGIVTNRDLR--FEKN-YSRKLSEI 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A  +L+++ I  L VVDD  K +G++ F D+ + 
Sbjct: 157 MTVENLVTTAHGTSLKEAELILQENKIEKLPVVDDSGKLLGLITFRDITKL 207



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              +      + + +++     G  L +A  IL E +   + VVD+  KL G+IT  DI 
Sbjct: 146 EKNYSRKLSEIMTVENLVTTAHGTSLKEAELILQENKIEKLPVVDDSGKLLGLITFRDIT 205

Query: 274 RNFHK 278
           +   K
Sbjct: 206 KLTQK 210


>gi|326335094|ref|ZP_08201292.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
 gi|325692732|gb|EGD34673.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sp. oral
           taxon 338 str. F0234]
          Length = 492

 Score =  106 bits (264), Expect = 7e-21,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + +
Sbjct: 45  NVPIVSAAMDTVTESAMAIAIAREGGIG-----VLHKNMTIEEQAQQVRKVKRAESGMII 99

Query: 233 VKIGCPLI----DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +   L     DA   + E   G + +VD+   LKGI+T  D+   F ++     +  V
Sbjct: 100 DPVTLSLSSTVGDAKQCMKEHSIGGIPIVDDQGILKGIVTNRDLR--FERE-GKRPITQV 156

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M         E   +  A ++L ++ I  L VV+   K +G++ F D+
Sbjct: 157 MTSQYLITAPEGISMKDAEKILERNKIEKLPVVNKDNKLVGLITFRDI 204


>gi|320449566|ref|YP_004201662.1| inosine-5'-monophosphate dehydrogenase [Thermus scotoductus SA-01]
 gi|320149735|gb|ADW21113.1| inosine-5'-monophosphate dehydrogenase [Thermus scotoductus SA-01]
          Length = 494

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            V+H    +         V  S      
Sbjct: 43  NIPILSAAMDTVTEAEMAIAMAREGGLG-----VIHKNLSIEAQASMVRKVKRSEAGMIQ 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E R G + VVD   KL G++T  D+   F ++L    V +V
Sbjct: 98  DPVTLPPTATLEDAERLMREYRIGGLPVVDLYGKLLGLVTNRDLR--FERNL-KRPVTEV 154

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A ++LR+H +  L +VD+  +  G++   D+++
Sbjct: 155 MTPLERLITAPPGTTLEEAEEILRKHKVEKLPLVDEAGRLKGLLTLKDIVK 205


>gi|296445884|ref|ZP_06887835.1| inosine-5'-monophosphate dehydrogenase [Methylosinus trichosporium
           OB3b]
 gi|296256552|gb|EFH03628.1| inosine-5'-monophosphate dehydrogenase [Methylosinus trichosporium
           OB3b]
          Length = 497

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 71/197 (36%), Gaps = 11/197 (5%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
                +   + +   +            P  S+ M       LAIA+ ++         +
Sbjct: 21  RPGHSLVMPSQV--DISTRLTREITLNLPIISSAMDTVTEARLAIAMAQAGGLGVIHQNL 78

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-----Q 261
             P  +   +                +     L DA+ ++S      + VV+ G      
Sbjct: 79  S-PVAQAAEVRKVKRYESGMVVDPITIYPDETLADALALMSRYSISGIPVVERGHGERPG 137

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +L GI+T  D+      D+ T  V ++M +    + E      A +LL QH I  L+VVD
Sbjct: 138 RLVGILTNRDVRFA---DVMTQPVAELMTRQLITVREGVDQDEARRLLHQHRIEKLLVVD 194

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G+V   D+ + 
Sbjct: 195 EDYRCVGLVTVKDIEKA 211


>gi|325103873|ref|YP_004273527.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
           12145]
 gi|324972721|gb|ADY51705.1| inosine-5'-monophosphate dehydrogenase [Pedobacter saltans DSM
           12145]
          Length = 489

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          LH    +         V  S   +  
Sbjct: 45  NVPIVSAAMDTVTDANLAIAIAQAGGLG-----FLHKNMTIEAQANEVRKVKRSESGMIQ 99

Query: 233 VKIG----CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + +A  ++ E + G + +V EG KL GI+T  D+   F KDL ++ V DV
Sbjct: 100 DPVTLSQSATVGEAFKMMKEFQIGGIPIVSEGNKLVGIVTNRDLR--FQKDL-SIKVSDV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N     E T L  A  +L+ H I  L VV +     G++ F D+ +F
Sbjct: 157 MTKENLITAPEGTTLKQAESILQDHKIEKLPVVKEDGTLSGLITFKDIQKF 207


>gi|88859047|ref|ZP_01133688.1| hypothetical protein PTD2_08584 [Pseudoalteromonas tunicata D2]
 gi|88819273|gb|EAR29087.1| hypothetical protein PTD2_08584 [Pseudoalteromonas tunicata D2]
          Length = 612

 Score =  105 bits (263), Expect = 8e-21,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDV-------MHSGDSIPLVKIGCPLIDAITIL 246
            + + F E  F   H    L + +   +D                 +     +      +
Sbjct: 117 HQYKGF-EQYFVRAHANRLLSSHYKTRADNWSERRISQVMHKGAVTLSPDASIRQTAKKM 175

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTV 304
           S+     + V+ E  +L G++T+ D+  R    +++   SV  +M   PK I E+  +  
Sbjct: 176 SQHGVSSIMVM-ENDRLVGVVTDRDLRNRVLATEIDPKESVSLIMSAKPKYIFENNRVFS 234

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A+ L+ +HNI  L V+D+  K +G++   DLLR
Sbjct: 235 ALHLMLRHNIHHLPVLDENHKPLGMLTSTDLLR 267


>gi|302348349|ref|YP_003815987.1| Putative signal-transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
 gi|302328761|gb|ADL18956.1| Putative signal-transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
          Length = 141

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 1/103 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               L +A  ++  K  G V VV    K+ GI TE D+ R     ++    + D+M K+P
Sbjct: 24  ADATLAEAARLMYTKGTGSVVVVSPEGKVIGIFTERDLSRVVADRVSYDSKLGDLMTKDP 83

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I +D  +T A++LL    I  L VVD   K +GI+   D++
Sbjct: 84  VTIRDDEPITKAVELLSTRKIRHLPVVDREGKLVGIITARDIV 126



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 24/58 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + T  V DV  KN      D  L  A +L+       ++VV    K IGI    DL R
Sbjct: 6   VWTSKVGDVARKNVVSATADATLAEAARLMYTKGTGSVVVVSPEGKVIGIFTERDLSR 63



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 26/58 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                  ++   P+  A+ +LS ++   + VVD   KL GIIT  DI     + L + 
Sbjct: 79  MTKDPVTIRDDEPITKAVELLSTRKIRHLPVVDREGKLVGIITARDIVDITERYLAST 136


>gi|312135397|ref|YP_004002735.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           owensensis OL]
 gi|311775448|gb|ADQ04935.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           owensensis OL]
          Length = 488

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   ++++
Sbjct: 99  DPFYLSPDNKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEI 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDDGNLKGLITIKDIEKA 205



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 154 IMTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDDGNLKGLITIKDIEKAV 206


>gi|119871878|ref|YP_929885.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673286|gb|ABL87542.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 139

 Score =  105 bits (263), Expect = 9e-21,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 1/109 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + D    + E + G V +VDE  K  GIITE D+     + L        VM +N
Sbjct: 25  KKDDKIKDIAIKMYENKVGSVVIVDEEGKPVGIITERDLVYVVARSLAPDTPAWMVMTEN 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           P VI ED L+T AM+ +R  NI  L VVD   + +G++ F D++ F ++
Sbjct: 85  PIVIREDALITEAMEKMRVQNIRHLPVVDTSGRLVGMLSFRDVVDFVVM 133



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V DVM++N     +D  +      + ++ +  +++VD+  K +GI+   DL+
Sbjct: 11  LRVSDVMVRNVITAKKDDKIKDIAIKMYENKVGSVVIVDEEGKPVGIITERDLV 64



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 9/60 (15%), Positives = 26/60 (43%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             +L       M   ++  +++    + +A+  +  +    + VVD   +L G+++  D+
Sbjct: 68  ARSLAPDTPAWMVMTENPIVIREDALITEAMEKMRVQNIRHLPVVDTSGRLVGMLSFRDV 127


>gi|146303554|ref|YP_001190870.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701804|gb|ABP94946.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 164

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 54/121 (44%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +       +   + +VK    +  A   +     G + VV+E  ++ GIITE D+ R   
Sbjct: 1   MSRKVSEIATKVVHVVKESDNITAAAMEMKNHNMGSMMVVNEKNQVVGIITERDMVRALA 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+D M ++ K + EDT +  A+ ++ ++    L ++    K +GIV   DL R
Sbjct: 61  DKRLDAKVKDYMTESVKGVTEDTTVEEALNIMLENGFRHLPIIGKDGKIMGIVSIRDLAR 120

Query: 338 F 338
            
Sbjct: 121 A 121



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V     + +A+ I+ E  F  + ++ +  K+ GI++  D+ R   
Sbjct: 79  VTEDTTVEEALNIMLENGFRHLPIIGKDGKIMGIVSIRDLARALA 123


>gi|315427058|dbj|BAJ48675.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 145

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 52/134 (38%), Gaps = 2/134 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  K    +              +V       +A   + +   G + V+D+   L GIIT
Sbjct: 2   PVFKRSVRYSPVKASDLMSYPPVVVSEDATAEEAAKTMWDNGVGSILVLDKDGTLVGIIT 61

Query: 269 EGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           E DI       L    L    +M KN      D  +   ++ ++  NI  + VVD   K 
Sbjct: 62  ERDILYAASHLLLGKDLKARSLMSKNLVTASPDEDVASVLEKMKDFNIRHIPVVDQEGKP 121

Query: 327 IGIVHFLDLLRFGI 340
           +G++   D+L FG+
Sbjct: 122 LGVLSSRDILDFGV 135


>gi|209963502|ref|YP_002296417.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW]
 gi|209956968|gb|ACI97604.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum centenum SW]
          Length = 496

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M      ALAIA+ ++         V+H    +         V      + + 
Sbjct: 51  IPLLSAAMDTVTESALAIAMAQAGGIG-----VVHRNLDIARQAEEVRKVKRFESGMVVN 105

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     L DA+ +++  R   + V D   +L GI+T  D+    +       + ++M
Sbjct: 106 PITIHPEATLADALDLMARHRISGIPVTDAAGRLVGILTNRDVRFATNP---QQPISELM 162

Query: 290 IKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K+    + E      A +LL Q+ I  L+VVD+  + +G++   D+ + 
Sbjct: 163 TKDRLVTVKEGVDRAEAKRLLHQYRIEKLLVVDEAYRCVGLITVKDIEKA 212


>gi|312622159|ref|YP_004023772.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312202626|gb|ADQ45953.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           kronotskyensis 2002]
          Length = 488

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   +++V
Sbjct: 99  DPFYLSPDNKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKA 205



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKAV 206


>gi|312127330|ref|YP_003992204.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|312793833|ref|YP_004026756.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           kristjanssonii 177R1B]
 gi|311777349|gb|ADQ06835.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           hydrothermalis 108]
 gi|312180973|gb|ADQ41143.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           kristjanssonii 177R1B]
          Length = 488

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   +++V
Sbjct: 99  DPFYLSPDNKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKA 205



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKAV 206


>gi|222529624|ref|YP_002573506.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456471|gb|ACM60733.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 488

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   +++V
Sbjct: 99  DPFYLSPDNKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKA 205



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKAV 206


>gi|213962709|ref|ZP_03390970.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sputigena
           Capno]
 gi|213954704|gb|EEB66025.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga sputigena
           Capno]
          Length = 489

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + +
Sbjct: 44  NVPIISAAMDTVTEAAMAIAMAREGGIG-----VLHKNMTIEEQAKQIRKVKRAESGMII 98

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD+   LKGI+T  D+   F  D N   + +V
Sbjct: 99  DPVTLPLNSKVSDAKRCMKENSIGGIPIVDDNGILKGIVTNRDLR--FEHD-NNRPITEV 155

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN  +  E T +  A  +L++  +  L VVD   K +G++ F D+
Sbjct: 156 MTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDI 203



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  ++ +   G  + +A  IL   +   + VVD+  KL G+IT  DI     K ++  
Sbjct: 156 MTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDIANLQEKSISNK 214


>gi|111220602|ref|YP_711396.1| IMP dehydrogenase [Frankia alni ACN14a]
 gi|111148134|emb|CAJ59803.1| IMP dehydrogeanse [Frankia alni ACN14a]
          Length = 510

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 19/172 (11%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  S+ M       +AIA+          RN S  D        +   + +        
Sbjct: 52  VPLVSSAMDTVTEARMAIAMARQGGVGVLHRNLSIED--------QAQQVDMVKRSESGM 103

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +         L DA  +++  R   V V +   +L GI+T  DI   F +D  +  V+
Sbjct: 104 ITAPVTCGPEATLEDANVLMARYRISGVPVTEPDGRLVGIVTNRDIR--FERD-YSRRVQ 160

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DVM + P +          A++LLR+H I  L +VDD  +  G++   D  +
Sbjct: 161 DVMTRMPLITAPVGVSPEDALELLRRHKIEKLPIVDDQGRLCGLITVKDFTK 212



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 25/62 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              +      + +   +    +G    DA+ +L   +   + +VD+  +L G+IT  D  
Sbjct: 152 ERDYSRRVQDVMTRMPLITAPVGVSPEDALELLRRHKIEKLPIVDDQGRLCGLITVKDFT 211

Query: 274 RN 275
           + 
Sbjct: 212 KR 213


>gi|307266315|ref|ZP_07547855.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii
           Rt8.B1]
 gi|306918693|gb|EFN48927.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter wiegelii
           Rt8.B1]
          Length = 484

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTESKLAIAIAREGGIG-----VIHKNMPIERQALEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  R   V +  +  KL GIIT  DI   F  DL+   + +V
Sbjct: 97  DPFYLSPDHTIRDAAELMARYRISGVPITVDS-KLVGIITNRDIR--FEDDLDK-PIREV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKAIE 205


>gi|146296720|ref|YP_001180491.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
 gi|145410296|gb|ABP67300.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           saccharolyticus DSM 8903]
          Length = 488

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTIEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   +++V
Sbjct: 99  DPFYLSPENKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKA 205



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGNLKGLITIKDIEKAV 206


>gi|213857704|ref|ZP_03384675.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 81

 Score =  105 bits (262), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/80 (56%), Positives = 59/80 (73%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I   +G+VV++ IGKSGHIG K+A+TLASTGTP+FFVH AEA HGDLGMI   D+++ +S
Sbjct: 1   ILHCEGKVVVSVIGKSGHIGKKIAATLASTGTPAFFVHPAEALHGDLGMIESRDVMLFIS 60

Query: 120 WSGSSDELKAILYYARRFSI 139
           +SG + EL  I+      SI
Sbjct: 61  YSGGAKELDLIIPRLEDKSI 80


>gi|291514447|emb|CBK63657.1| inosine-5'-monophosphate dehydrogenase [Alistipes shahii WAL 8301]
          Length = 492

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL            V+H    +         V         
Sbjct: 45  NIPIVSAAMDTVTEAPLAIALAREGGIG-----VIHKNMTIAEQAAQVRKVKRAENGMIY 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++ E + G + VVD  + L GI+T  D+   F +D++   +E+V
Sbjct: 100 DPVTISKDHTVGDALNLMKENKIGGIPVVDADRMLIGIVTNRDLR--FQRDMSR-RIEEV 156

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M             L   A ++L    I  L VVDD  + +G++ + D+ +
Sbjct: 157 MTPGDRLVTTHNPELA-HAQEILLNSKIEKLPVVDDAGRLVGLITYKDITK 206


>gi|57242158|ref|ZP_00370098.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           RM3195]
 gi|57017350|gb|EAL54131.1| inosine-5'-monophosphate dehydrogenase [Campylobacter upsaliensis
           RM3195]
          Length = 484

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +         V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----IIHKNMDIKAQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ +++E R   V VVDE +KL GI+T  D+   F  + N   VE+V
Sbjct: 95  DPIFIAPNASIYEALELMAEYRISGVPVVDEERKLLGILTNRDLR--FESNFNN-RVENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD+    +G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSTNKVEKLPIVDESNHLVGLITIKDLKK 201


>gi|308066920|ref|YP_003868525.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Paenibacillus polymyxa E681]
 gi|171704677|gb|ACB54657.1| inosine 5' monophosphate dehydrogenase [Paenibacillus polymyxa]
 gi|305856199|gb|ADM67987.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Paenibacillus polymyxa E681]
          Length = 485

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +    V    V  S   +  
Sbjct: 43  NIPLMSAGMDTVTEAVLAIAMAREGGIG-----IIHKNMSIEQQAVEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V VV+E  KL GIIT  D+   F  D N L + +V
Sbjct: 98  NPFSLTPDHLVSDAEAVMGKYRISGVPVVNEENKLVGIITNRDLR--FIHDFN-LKISEV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K   V     T L  A  +L++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTKEELVTAPVGTTLQEAEVILQKHKIEKLPLVDDENYLKGLITIKDIEKA 205


>gi|315224236|ref|ZP_07866075.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea
           F0287]
 gi|314945784|gb|EFS97794.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea
           F0287]
          Length = 489

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + +
Sbjct: 44  NVPIISAAMDTVTEAAMAIAMAREGGIG-----VLHKNMTIEEQAKQIRKVKRAESGMII 98

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD    LKGI+T  D+   F  D N   + +V
Sbjct: 99  DPVTLPLNSKVSDAKRCMKENNIGGIPIVDANGILKGIVTNRDLR--FEHD-NNRPITEV 155

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN  +  E T +  A  +L++  +  L VVD   K +G++ F D+
Sbjct: 156 MTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDI 203


>gi|152993377|ref|YP_001359098.1| inosine 5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
 gi|151425238|dbj|BAF72741.1| inosine-5'-monophosphate dehydrogenase [Sulfurovum sp. NBC37-1]
          Length = 481

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            V+H    + T  +    V  S   I +
Sbjct: 40  NIPIVSAAMDTVTEFKAAIAMARLGGIG-----VIHKNMDVATQALQVKKVKKSESGIII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  ++ E R   V VVD  +KL GIIT  D+   F  D+ +L V D 
Sbjct: 95  DPIYISPDATVGEADALMGEYRISGVPVVDADKKLIGIITNRDMR--FITDM-SLKVADT 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   P     + T L  A ++L++H I  L +VDD  K  G++   D+
Sbjct: 152 MTPAPLVTAKKGTTLEEAAKVLQKHKIEKLPIVDDDGKLNGLITIKDI 199


>gi|148270727|ref|YP_001245187.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
 gi|281413032|ref|YP_003347111.1| hypothetical protein [Thermotoga naphthophila RKU-10]
 gi|147736271|gb|ABQ47611.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
 gi|281374135|gb|ADA67697.1| CBS domain containing protein [Thermotoga naphthophila RKU-10]
          Length = 215

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   +       +A+ ++ + +   + +V + +K+ GI+TE D+             
Sbjct: 7   MTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYASPSKATTLNI 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+ L +E++M KN   + E+  +  A +++ + +IS L VVDD  + +GI+   
Sbjct: 66  WELHYLLSKLKIEEIMTKNVVTVNENAPIEDAARIMEEKDISGLPVVDDAGRLVGIITQT 125

Query: 334 DLLR 337
           D+ +
Sbjct: 126 DIFK 129



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+   +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVM-KDEKIVGIVTEKDLL 53



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 38/91 (41%), Gaps = 16/91 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V    P+ DA  I+ EK    + VVD+  +L GIIT+ DIF+ F        V
Sbjct: 81  MTKNVVTVNENAPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVF--------V 132

Query: 286 EDVMIKNPKVIL--------EDTLLTVAMQL 308
           E    K    I            LL VA ++
Sbjct: 133 EIFGTKREGTIRYTMEMPDKPGELLEVAKRI 163


>gi|332797972|ref|YP_004459472.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
 gi|332695707|gb|AEE95174.1| paired CBS domain protein [Acidianus hospitalis W1]
          Length = 164

 Score =  104 bits (261), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +       +   + +VK    + +A   + E   G + V+D   ++ GIITE D+ R   
Sbjct: 1   MATKVSQIATTKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDVVRAVS 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  VE  M K+ K + EDT +T A+ ++  +    L ++    K  GIV   DL R
Sbjct: 61  NRDIDGPVEKYMTKDVKGVTEDTSVTDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLAR 120

Query: 338 F 338
            
Sbjct: 121 A 121



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
           V     + DA+ ++    F  + ++    KL GI++  D+ R     H        E+V
Sbjct: 79  VTEDTSVTDALDVMLNNGFRHLPIIKSDGKLYGIVSIRDLARALLDVHTMQFGKPAEEV 137


>gi|297544088|ref|YP_003676390.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
 gi|296841863|gb|ADH60379.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 484

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTESKLAIAIAREGGIG-----VIHKNMSIERQALEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  +   V +  +  KL GIIT  DI   F  DLN   +++V
Sbjct: 97  DPFSLTPDHTIKDAAELMARYKISGVPITVDS-KLVGIITNRDIR--FEDDLNK-PIKEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKAVE 205


>gi|256818863|ref|YP_003140142.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea DSM
           7271]
 gi|256580446|gb|ACU91581.1| inosine-5'-monophosphate dehydrogenase [Capnocytophaga ochracea DSM
           7271]
          Length = 489

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + +
Sbjct: 44  NVPIISAAMDTVTEAAMAIAMAREGGIG-----VLHKNMTIEEQAKQIRKVKRAESGMII 98

Query: 233 VKIGCPL----IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +  PL     DA   + E   G + +VD    LKGI+T  D+   F  D N   + +V
Sbjct: 99  DPVTLPLNSKVSDAKRCMKENNIGGIPIVDANGILKGIVTNRDLR--FEHD-NNRPITEV 155

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN  +  E T +  A  +L++  +  L VVD   K +G++ F D+
Sbjct: 156 MTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDI 203



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  ++ +   G  + +A  IL   +   + VVD+  KL G+IT  DI     K ++  
Sbjct: 156 MTSKNLVIANEGTSMKEAEGILQRSKVEKLPVVDKNYKLVGLITFRDIANLQEKSISNK 214


>gi|289577801|ref|YP_003476428.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus
           Ab9]
 gi|289527514|gb|ADD01866.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter italicus
           Ab9]
          Length = 484

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTESKLAIAIAREGGIG-----VIHKNMSIERQALEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  +   V +  +  KL GIIT  DI   F  DLN   +++V
Sbjct: 97  DPFSLTPDHTIKDAAELMARYKISGVPITVDS-KLVGIITNRDIR--FEDDLNK-PIKEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKAVE 205


>gi|269925620|ref|YP_003322243.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789280|gb|ACZ41421.1| inosine-5'-monophosphate dehydrogenase [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 490

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            ++H    +         V  S   + +
Sbjct: 43  NIPIVSAAMDTVTEARMAIALAREGGIG-----IIHRNLSIEEQVAEVDKVKRSEAGMIV 97

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA+ I+ +     V VVDE  KL GI+T  DI   F  DL T  +   
Sbjct: 98  EPVTLPPYAQLSDAVAIMEKYHISGVPVVDEEGKLVGILTNRDIR--FETDL-TKPISSA 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A ++L ++ I  L VVDD  +  G++   D+ + 
Sbjct: 155 MTSENLITAPVGTTLEEAREILHRYKIEKLPVVDDEGRLKGLITVKDIQKK 205



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++    +G  L +A  IL   +   + VVD+  +LKG+IT  DI +   
Sbjct: 155 MTSENLITAPVGTTLEEAREILHRYKIEKLPVVDDEGRLKGLITVKDIQKKIQ 207


>gi|327400971|ref|YP_004341810.1| hypothetical protein Arcve_1085 [Archaeoglobus veneficus SNP6]
 gi|327316479|gb|AEA47095.1| protein of unknown function DUF39 [Archaeoglobus veneficus SNP6]
          Length = 490

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 63/150 (42%), Gaps = 9/150 (6%)

Query: 196 SRNFSENDFYVLHPGGKLGT-------LFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
            R     +F++  P  ++                V         ++    + +A  I+ +
Sbjct: 340 KRQIERAEFFLSPPAERISRECNFKPMRQREVKFVRSVMTPAITIEPETSVDEASRIMIQ 399

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K    + VV +  +L GI+T  DI +       T +V ++M +     L D  + +A + 
Sbjct: 400 KGVNHLPVV-KDGRLVGIVTSWDIAKAVAT-KKTGNVAEIMTRKVITALPDEPVEIAARK 457

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +HNIS L VVD  Q+ IG+V   DL + 
Sbjct: 458 MEKHNISALPVVDAKQRVIGMVTSEDLSKL 487



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              P+  A   + +     + VVD  Q++ G++T  D+ +   +
Sbjct: 447 PDEPVEIAARKMEKHNISALPVVDAKQRVIGMVTSEDLSKLLVR 490


>gi|326390923|ref|ZP_08212474.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325993071|gb|EGD51512.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 484

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTESKLAIAIAREGGIG-----VIHKNMPIERQALEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A  +++  R   V +  +  KL GIIT  DI   F  DL+   + +V
Sbjct: 97  DPFYLSPDHTIREAAELMARYRISGVPITVDS-KLVGIITNRDIR--FEDDLDK-PIREV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKAIE 205


>gi|15669594|ref|NP_248407.1| hypothetical protein MJ_1404 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496177|sp|Q58799|Y1404_METJA RecName: Full=Uncharacterized protein MJ1404
 gi|1592053|gb|AAB99421.1| hypothetical protein MJ_1404 [Methanocaldococcus jannaschii DSM
           2661]
          Length = 421

 Score =  104 bits (261), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 54/120 (45%), Gaps = 2/120 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +V         V    P +DA+  + +       +V+   K+ GIIT+ DI     K
Sbjct: 67  TDEEVRSLMYKAHCVHEDTPFLDAVCEMLDSGQRAAPIVNNVGKMVGIITDYDIMARAAK 126

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +    V  +M +N   I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L
Sbjct: 127 SKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 186



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG-----IVHFLDLL 336
            V+++M K+   +  DT ++ A+ ++ ++    L+VVD      G     ++   DLL
Sbjct: 8   PVKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDKKD---GKEEYYLISMRDLL 62



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/140 (15%), Positives = 53/140 (37%), Gaps = 16/140 (11%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +            ++  +     +  A  ++ +   G + VVD+     G++TE DI 
Sbjct: 127 SKIMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 186

Query: 274 RNFHKDLNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   K    ++  +               +M      +  D     A +++++++I  + 
Sbjct: 187 KKVFKPKKKMTAGEFKGEKVPRMGQPVRLIMNTPLITVDVDASAADAARVMQEYDIRGVP 246

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV   +   GIV  LD++++
Sbjct: 247 VV-KGKSLRGIVTRLDIIKY 265



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 6/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGD 271
             L +           +  V    P+  A+ I+ E  F  + VVD  +G++   +I+  D
Sbjct: 1   MRLMLNEPVKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVDKKDGKEEYYLISMRD 60

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +      D     V  +M K    + EDT    A+  +         +V++  K +GI+ 
Sbjct: 61  LLLASSTDEE---VRSLMYKA-HCVHEDTPFLDAVCEMLDSGQRAAPIVNNVGKMVGIIT 116

Query: 332 FLDLL 336
             D++
Sbjct: 117 DYDIM 121


>gi|212703508|ref|ZP_03311636.1| hypothetical protein DESPIG_01553 [Desulfovibrio piger ATCC 29098]
 gi|212673076|gb|EEB33559.1| hypothetical protein DESPIG_01553 [Desulfovibrio piger ATCC 29098]
          Length = 485

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 75/168 (44%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++            ++H    +    +    V  S   + L
Sbjct: 41  RIPLLSAAMDTVTESAMAISMARMGGIG-----IIHKNMPIERQRLEVERVKKSESGMIL 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ ++++ R   + VVD+  KL GI+T  D+   F +D + + V +V
Sbjct: 96  DPVTVSSRNSVQEALDLMADFRVSGLPVVDD-GKLVGILTNRDVR--FIEDASAIRVGEV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN   +   T L  A + L +H I  L+VVD+ ++  G++   D+
Sbjct: 153 MTSKNLVTVPMGTSLEEAKRHLHEHRIEKLLVVDENERLRGLITMKDI 200


>gi|78044937|ref|YP_360768.1| polyA polymerase family protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77997052|gb|ABB15951.1| polyA polymerase family protein [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 864

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  V +   + +A  I+       + V+ EG KL GII+  D+ +  H +L    V+  
Sbjct: 316 PVKFVTVDSTVEEARKIMVRYGHSGLPVL-EGDKLVGIISRRDVDKIIHHNLGHAPVKAY 374

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP  I  +  L  A++LL +H+I  L VV +  K IGI+   DLL+
Sbjct: 375 MSKNPVTIEPEASLEEALRLLIKHDIGRLPVV-EGGKLIGIISRTDLLK 422



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 15/74 (20%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 269 EGDIFRNFHKDLNTL--------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + D+       L  L        +V ++M    K +  D+ +  A +++ ++  S L V+
Sbjct: 285 DRDVQEVLEIALKLLNNFKIPAKTVREIMSWPVKFVTVDSTVEEARKIMVRYGHSGLPVL 344

Query: 321 DDCQKAIGIVHFLD 334
            +  K +GI+   D
Sbjct: 345 -EGDKLVGIISRRD 357



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A    +   +   ++    L +A+ +L +   G + VV EG KL GII+  
Sbjct: 360 KIIHHNLGHAPVKAYMSKNPVTIEPEASLEEALRLLIKHDIGRLPVV-EGGKLIGIISRT 418

Query: 271 DIFRNFHK 278
           D+ + +H+
Sbjct: 419 DLLKQYHR 426


>gi|312877453|ref|ZP_07737416.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
 gi|311795774|gb|EFR12140.1| inosine-5'-monophosphate dehydrogenase [Caldicellulosiruptor
           lactoaceticus 6A]
          Length = 488

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 44  NIPLMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMTVEEQASEVDKVKRSEHGVIV 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++++ R   V +     KL GIIT  DI   F  D +   +++V
Sbjct: 99  DPFYLSPDNKIYEAMELMAKYRISGVPITV-NGKLVGIITNRDIR--FETDYSK-PIKEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N     E   L  A +++++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGDLKGLITIKDIEKA 205



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  ++   K G  L +A  I+ + +   + +VD+   LKG+IT  DI +  
Sbjct: 155 MTSSNLITAKEGITLEEAKEIMKKHKIEKLPIVDDEGDLKGLITIKDIEKAV 206


>gi|289192493|ref|YP_003458434.1| protein of unknown function DUF39 [Methanocaldococcus sp. FS406-22]
 gi|288938943|gb|ADC69698.1| protein of unknown function DUF39 [Methanocaldococcus sp. FS406-22]
          Length = 507

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N   
Sbjct: 402 NISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKRTIEEIMTRNVIT 459

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ED       + + ++NIS + VVDD ++ +G+V   D+ R 
Sbjct: 460 AHEDEPADHVARKMSKNNISGVPVVDDYRRVVGVVTSEDISRL 502



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K P     +  +  A ++L +HNI+ L +VD+  K +GI+   D+ + 
Sbjct: 388 VKDILSKPPITAQSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 441



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P       +S+     V VVD+ +++ G++T 
Sbjct: 439 AKALAQNKRTIEEIMTRNVITA--HEDEPADHVARKMSKNNISGVPVVDDYRRVVGVVTS 496

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 497 EDISRLFG 504


>gi|240167838|ref|ZP_04746497.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium kansasii
           ATCC 12478]
          Length = 532

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +  +      P  S+ M       +AIA+ 
Sbjct: 42  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTTKIRLKVPLVSSAMDTVTESRMAIAMA 101

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 102 RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 159

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +      V +VM K P     E    + A+ LLR+H
Sbjct: 160 LPVVDDDGALVGIITNRDMRFEVDQG---KQVAEVMTKAPLITAQEGVSASAALGLLRRH 216

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 217 KIEKLPVVDGRGRLTGLITVKDFVK 241


>gi|332521079|ref|ZP_08397537.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
           5H-3-7-4]
 gi|332043172|gb|EGI79369.1| inosine-5'-monophosphate dehydrogenase [Lacinutrix algicola
           5H-3-7-4]
          Length = 496

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 53/217 (24%), Positives = 87/217 (40%), Gaps = 29/217 (13%)

Query: 141 LIAITSENKSVVAC--HADIVLTLPKEPESCP-------------HGLAPTTSAIMQLAI 185
           LIA+T+    +V      D VL +P   E  P                 P  SA M    
Sbjct: 5   LIAMTAHENKIVGEGLTYDDVLLVPAFSEVLPREVNIQTKFTRNITINVPIVSAAMDTVT 64

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI----D 241
              +AIA+            VLH    +         V  +   + +  +  PL     D
Sbjct: 65  ESRMAIAMAREGGIG-----VLHKNMTIEQQAQKVRRVKRAESGMIIDPVTLPLTAIVAD 119

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDT 300
           A + + E   G + +VDE   LKGI+T  D+     +  N   + +VM  +N     E T
Sbjct: 120 AKSAMREHSIGGIPIVDENGLLKGIVTNRDLRF---EHQNDRPIVEVMTSENLITAAEGT 176

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A ++L+++ I  L++V +  K +G++ F D+ +
Sbjct: 177 SLKDAEKILQENKIEKLLIVKEE-KLVGLITFRDITK 212


>gi|152964711|ref|YP_001360495.1| inosine-5'-monophosphate dehydrogenase [Kineococcus radiotolerans
           SRS30216]
 gi|151359228|gb|ABS02231.1| inosine-5'-monophosphate dehydrogenase [Kineococcus radiotolerans
           SRS30216]
          Length = 510

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+            VLH              V  S      
Sbjct: 56  RIPLLSSAMDTVTESRMAIAMARQGGLG-----VLHRNLSAEEQAAQVDLVKRSESGMVT 110

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L D   +    R   V VVD   +L GI+T  D+   F  D +   V DV
Sbjct: 111 QPVTTTPDATLADVDVLCGRYRISGVPVVDADGRLVGIVTNRDLR--FESDFSR-PVRDV 167

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P V          AMQLLRQH I  L +VD   +  G++   D ++
Sbjct: 168 MTKAPLVTAPVGISTDDAMQLLRQHKIEKLPIVDAENRLTGLITVKDYVK 217


>gi|189211599|ref|XP_001942129.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
 gi|187979328|gb|EDU45954.1| sugar isomerase, KpsF/GutQ [Pyrenophora tritici-repentis Pt-1C-BFP]
          Length = 251

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 66/196 (33%), Positives = 93/196 (47%), Gaps = 36/196 (18%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
             V  + A  GRVV+ G+GKSGH+G KLA T  S G  + F+HAA+A HGDLG +   DL
Sbjct: 31  RIVTNVHAQDGRVVVCGLGKSGHVGRKLAGTPKSLGVSAGFLHAAQAVHGDLGDVRGADL 90

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS---VVACHADIV------------ 159
           ++ +S+SG + EL  +L +     +P+I +T    +    +     +V            
Sbjct: 91  LLFVSFSGRARELLNVLPHV-APKVPVIVLTGHADASTCPLLKGRKVVGSNEGRRGGGEG 149

Query: 160 ------------LTLPK---EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND- 203
                       L  P    E ES   G APTTSA + +AIGD LA+ +   R +     
Sbjct: 150 EEGWDGRGVGVLLPTPIHESEEESFSVG-APTTSATVAMAIGDMLALTVT-KRIYGAEKA 207

Query: 204 --FYVLHPGGKLGTLF 217
             F   HPGG +G   
Sbjct: 208 WIFNRNHPGGAIGAET 223


>gi|88803057|ref|ZP_01118584.1| putative inosine-5'-monophosphate dehydrogenase [Polaribacter
           irgensii 23-P]
 gi|88781915|gb|EAR13093.1| putative inosine-5'-monophosphate dehydrogenase [Polaribacter
           irgensii 23-P]
          Length = 491

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            VLH    +         V  +   + L
Sbjct: 45  NVPIASAAMDTVTESAMAIAIAREGGIG-----VLHKNMTIAQQAQEVRRVKRAESGMIL 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +   + DA   + E   G + +VD+   LKGI+T  D+     +  NT  + +V
Sbjct: 100 DPVTLPLTATIADAKANMKEHGIGGIPIVDDQGILKGIVTNRDLRF---EHENTRPIIEV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   N       T L+ A ++L+ + I  L++VDD  K +G++ F D+ +
Sbjct: 157 MTSVNLVTAAVGTSLSDAEKILQNYKIEKLLIVDDAYKLMGLITFRDITK 206


>gi|269792609|ref|YP_003317513.1| inosine-5'-monophosphate dehydrogenase [Thermanaerovibrio
           acidaminovorans DSM 6589]
 gi|269100244|gb|ACZ19231.1| inosine-5'-monophosphate dehydrogenase [Thermanaerovibrio
           acidaminovorans DSM 6589]
          Length = 491

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 64/172 (37%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +         V  S   + +
Sbjct: 45  NIPIVSAAMDTVTESRLAIAMAREGG-----MGVIHRNMPIDRQAAEVDKVKRSESGVIV 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S      V +VDE  +L GIIT  D+           ++ +V
Sbjct: 100 DPFYLYPQDKIQDAVDLMSHYHISGVPIVDEKLRLVGIITNRDLRFVTDYG---QAISEV 156

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+  V     T L  A  +L +H I  L +VD   K  G++   D+ +  
Sbjct: 157 MTKDGLVTAPVGTTLDDAKDILMRHKIEKLPIVDGEGKLKGLITIKDIQKAK 208


>gi|154684527|ref|YP_001419688.1| inosine 5'-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           FZB42]
 gi|154350378|gb|ABS72457.1| GuaB [Bacillus amyloliquefaciens FZB42]
          Length = 488

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEH 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  + QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|167624485|ref|YP_001674779.1| CBS domain-containing protein [Shewanella halifaxensis HAW-EB4]
 gi|167354507|gb|ABZ77120.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella halifaxensis HAW-EB4]
          Length = 615

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 62/136 (45%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H G          S V     + PL + +   + +A  ++   R   V V+D   KL
Sbjct: 134 RLRHQGRFKAKELATTSRVTTLMSTSPLTIDMKSTVAEASKLMRTSRVSSVLVID-NNKL 192

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   ++ + +L V   M   P  I  ++L+  AM L+ +HNI  L V D
Sbjct: 193 VGILTDKDLRNRVLAENFDGSLPVHQAMTTTPVTIESNSLVFEAMLLMSEHNIHHLPVAD 252

Query: 322 DCQKAIGIVHFLDLLR 337
           +     GIV   D+LR
Sbjct: 253 N-GVVTGIVTSTDILR 267


>gi|308171900|ref|YP_003918605.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|307604764|emb|CBI41135.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens DSM
           7]
 gi|328909968|gb|AEB61564.1| inosine-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           LL3]
          Length = 488

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEH 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  + QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K   V     T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTAPVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|269200131|gb|ACZ28695.1| inosine monophosphate dehydrogenase [Bacillus amyloliquefaciens]
 gi|328551708|gb|AEB22200.1| inosine 5'-monophosphate dehydrogenase [Bacillus amyloliquefaciens
           TA208]
          Length = 488

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEH 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  + QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNKDDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K   V     T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTAPVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|298506080|gb|ADI84803.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           KN400]
          Length = 476

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
                  ++     + +AIT L     G + +  EG +L G++T+GDI R   + ++   
Sbjct: 128 RRRLDSVVIPCSASIAEAITQLDRAGTGALVLCSEGDRLHGLLTDGDIRRAVLRGISLDA 187

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +DV  + P  +        A+ L+ QH+I+ L VVDD  + +  +   DL+
Sbjct: 188 PCQDVASRRPVTVEPSFSAAQALHLMNQHDINHLPVVDDTGRVVDFLLRRDLI 240



 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
             + +     ++    P+ +AI  L     G + V    +KL G++T+GD+ R   K ++
Sbjct: 3   SDIKAILEQVVISPDVPIAEAIAQLDRAGTGSLVVCSADKKLYGLLTDGDVRRALLKAVD 62

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 D+  + P +     L   A++L+  H+I+ L V+D   + +  +   DL+
Sbjct: 63  MGAPCGDIANRKPVITFVPLLPIEALRLMNHHDINHLPVLDAEGRVVDFLLRRDLV 118


>gi|39997066|ref|NP_953017.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           PCA]
 gi|39983956|gb|AAR35344.1| nucleotidyltransferase family protein [Geobacter sulfurreducens
           PCA]
          Length = 476

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 1/113 (0%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
                  ++     + +AI  L     G + +  EG +L G++T+GDI R   + ++   
Sbjct: 128 RRRLDSVVIPCSASIAEAIAQLDRAGTGALVLCSEGDRLHGLLTDGDIRRAVLRGISLDA 187

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +DV  + P  +        A+ L+ QH+I+ L VVDD  + +  +   DL+
Sbjct: 188 PCQDVASRRPVTVEPSFSAAQALHLMNQHDINHLPVVDDTGRVVDFLLRRDLI 240



 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
             + +     ++    P+ +AI  L     G + V    +KL G++T+GD+ R   K ++
Sbjct: 3   SDIKAILEQVVISPDVPIAEAIAQLDRAGTGSLVVCSADKKLYGLLTDGDVRRALLKAVD 62

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 D+  + P +     L   A++L+  H+I+ L V+D   + +  +   DL+
Sbjct: 63  MGAPCGDIANRKPVITFVPLLPIEALRLMNHHDINHLPVLDAEGRVVDFLLRRDLV 118


>gi|300868882|ref|ZP_07113488.1| signal transduction protein [Oscillatoria sp. PCC 6506]
 gi|300333099|emb|CBN58680.1| signal transduction protein [Oscillatoria sp. PCC 6506]
          Length = 175

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 42/141 (29%), Positives = 63/141 (44%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                 L +   PL +AI IL+E+R   + VVDE +KL G+I+E D+             
Sbjct: 31  MTRDPILARPEMPLSEAIKILAERRISGLPVVDENEKLVGVISETDLMWQEVGVTPPAYI 90

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           R  HK L   +V +VM ++P     D  L  A +L+ + +I  L
Sbjct: 91  MLLDSVIYLENPGRYERELHKALGQ-TVGEVMSRDPITTTPDKSLPEAARLMHERSIHRL 149

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+D   KAIGI+   D++R 
Sbjct: 150 PVIDPTGKAIGILTRGDIVRA 170



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 271 DIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+ R  ++   +   +V DVM ++P +   +  L+ A+++L +  IS L VVD+ +K +G
Sbjct: 11  DLPREINRIPPIMPKTVADVMTRDPILARPEMPLSEAIKILAERRISGLPVVDENEKLVG 70

Query: 329 IVHFLDLL 336
           ++   DL+
Sbjct: 71  VISETDLM 78



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 21/45 (46%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               L +A  ++ E+    + V+D   K  GI+T GDI R    +
Sbjct: 130 PDKSLPEAARLMHERSIHRLPVIDPTGKAIGILTRGDIVRAMAAE 174


>gi|291167093|gb|EFE29139.1| inosine-5'-monophosphate dehydrogenase [Filifactor alocis ATCC
           35896]
          Length = 487

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++AIA+            ++H    +    +    V  S   + +
Sbjct: 41  NIPLMSAGMDTVTEHSMAIAIAREGGIG-----IIHKNMSIEEQVLEVDKVKRSEHGVII 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++   R   V +VDE +KL GI+T  DI   F +D +   +E+ 
Sbjct: 96  DPFYLTKEKTLRDADDLMGRYRISGVPIVDENKKLIGILTNRDIR--FEQDFSK-KIEEA 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N    LE   L  A ++LRQH I  L +VD      G++   D+
Sbjct: 153 MTSENLITALEGVKLEEAQEILRQHKIEKLPIVDKNYILKGLITIKDI 200


>gi|118467449|ref|YP_885981.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
 gi|118168736|gb|ABK69632.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium smegmatis
           str. MC2 155]
          Length = 513

 Score =  104 bits (260), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 23  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKRIRLRVPLVSSAMDTVTESRMAIAMA 82

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G +                      L +   + +  R   
Sbjct: 83  RAGGMG--VLHRNLPVAEQAGQVETVKRSEAGMVTDPVTCSPDNTLAEVDAMCARFRISG 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+  +L GIIT  D+     +   +  V +VM K P     E      A+ LLR+H
Sbjct: 141 LPVVDDTGELVGIITNRDMRFEVDQ---SKPVSEVMTKAPLITAKEGVSAEAALGLLRRH 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   K  G++   D ++
Sbjct: 198 KIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|118431612|ref|NP_148203.2| hypothetical protein APE_1838.1 [Aeropyrum pernix K1]
 gi|116062936|dbj|BAA80842.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 135

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
              P+ + + ++  +      VVD+  +  GI TE D+ R      +    VE+ M +NP
Sbjct: 19  PQTPVREVVKMMYTQGKSAAVVVDQDNRPIGIFTERDVVRVVATGGDLDAPVEEYMTRNP 78

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             + ++  LT A+ L+ +H +  L VVD   K +GI+ 
Sbjct: 79  VAVRDNESLTKALALMIEHRVRHLPVVDQEGKLVGIIT 116



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P      T +   ++++     S  +VVD   + IGI    D++R
Sbjct: 14  PLTAAPQTPVREVVKMMYTQGKSAAVVVDQDNRPIGIFTERDVVR 58



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +   +   V+    L  A+ ++ E R   + VVD+  KL GIIT   I     +
Sbjct: 73  YMTRNPVAVRDNESLTKALALMIEHRVRHLPVVDQEGKLVGIITASSITEVLKR 126


>gi|157374890|ref|YP_001473490.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
 gi|157317264|gb|ABV36362.1| cyclic nucleotide-binding protein [Shewanella sediminis HAW-EB3]
          Length = 615

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H            + V       PLV  +   + DA   +   R   V V+D   KL
Sbjct: 134 RLRHQTRFKAKELTTTNRVSSLMSGDPLVIDVNATVSDAARKMRSTRVSSVLVID-NNKL 192

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   + L  +L V   M   PK +  ++L+  AM L+ +H+I  L +VD
Sbjct: 193 SGILTDRDLRNRVLAEGLEGSLPVHQAMTTKPKTLTSNSLVFEAMLLMSEHSIHHLPIVD 252

Query: 322 DCQKAIGIVHFLDLLR 337
           D  +A+G++   D+LR
Sbjct: 253 DE-RAVGVLTSTDILR 267


>gi|312891857|ref|ZP_07751362.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis
           DSM 18603]
 gi|311295648|gb|EFQ72812.1| inosine-5'-monophosphate dehydrogenase [Mucilaginibacter paludis
           DSM 18603]
          Length = 489

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 8/140 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG 260
            +LH    +         V  S   +            L DA  I+ E R G + ++D  
Sbjct: 72  GMLHKNMTITQQADEVRKVKRSESGMIQDPVTLLETAILADAFKIMKEFRIGGIPIIDSD 131

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMV 319
           +KLKGIIT  D+   F K+++   + +VM K   VI  + T L  A ++L+ + I  L V
Sbjct: 132 RKLKGIITNRDLR--FQKNMSR-PIAEVMTKENLVIAPEGTTLVQAEEILQNYKIEKLPV 188

Query: 320 VDDCQKAIGIVHFLDLLRFG 339
           VD   +  G++ F D+ +F 
Sbjct: 189 VDQNGRLSGLITFKDIQKFK 208


>gi|319950727|ref|ZP_08024623.1| inosine 5'-monophosphate dehydrogenase [Dietzia cinnamea P4]
 gi|319435605|gb|EFV90829.1| inosine 5'-monophosphate dehydrogenase [Dietzia cinnamea P4]
          Length = 511

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 44/208 (21%), Positives = 79/208 (37%), Gaps = 16/208 (7%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +++V   +              P  S+ M       +AIA+ 
Sbjct: 17  KVAMVGLTFDDVLLLPAASEVVPSEVDTSTRLTREITLRVPLISSAMDTVTEARMAIAMA 76

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKR 250
                      VLH    +G        V  S             G  L +   + +  R
Sbjct: 77  RQGGIG-----VLHRNLSVGDQAAQVETVKRSEAGMVTDPVTCAPGDTLAEVDEMCARYR 131

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLL 309
              + V DE  +L GIIT  D+     K   +  V++VM + P V+  E      A+ LL
Sbjct: 132 ISGLPVTDERGELVGIITNRDMRFEMDK---SRRVDEVMTRAPLVVAREGVTAEAALGLL 188

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           R+H I  L +VD   +  G++   D ++
Sbjct: 189 RRHKIEKLPIVDGDGRLTGLITVKDFVK 216


>gi|222100404|ref|YP_002534972.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
 gi|221572794|gb|ACM23606.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
          Length = 215

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   +       +A+ ++ + +   + V+ +  ++ GI+TE D+             
Sbjct: 7   MTRNPITIAPETSFNEALKLMKQNKIKRLIVM-KDDRIVGIVTEKDLLYASPSKATTLNV 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+ L VE++M K+   + E+T +  A +++ + +IS L VVDD  K +GI+   
Sbjct: 66  WELHYLLSKLKVEEIMTKDVVTVNENTPIEDAARIMEERDISGLPVVDDAGKLVGIITQT 125

Query: 334 DLLR 337
           D+ +
Sbjct: 126 DIFK 129



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T    A++L++Q+ I  L+V+ D  + +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFNEALKLMKQNKIKRLIVMKDD-RIVGIVTEKDLL 53



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 16/91 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+ DA  I+ E+    + VVD+  KL GIIT+ DIF+ F        V
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEERDISGLPVVDDAGKLVGIITQTDIFKVF--------V 132

Query: 286 EDVMIKNPKVI--------LEDTLLTVAMQL 308
           E    K    I            LL VA ++
Sbjct: 133 EIFGTKREGTIRYTMEMPNRPGELLEVAKRI 163


>gi|119871784|ref|YP_929791.1| signal transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673192|gb|ABL87448.1| putative signal transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 688

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVE 286
                V     L D + I++EK  G V VV E  +L G I+E D  +    +      VE
Sbjct: 577 RDPITVPPSATLRDVLKIMAEKNIGFVPVV-EDGRLVGGISESDFVQILLNNTPLDTPVE 635

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM +    I +   +  A +L+ +HNI  L VV +  + +G++   DLL+ 
Sbjct: 636 KVMRRQLITIEKTRPVKEAAELMVKHNIRHLPVV-EDGRVVGVLSVRDLLKA 686



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 54/143 (37%), Gaps = 10/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        L +     ++V      +  V    PL +    + +     V +  +G ++
Sbjct: 483 FGRRQLIRALASGATPEAEVGRFATRVDCVSEDAPLTEVFAAMEKYGVRDVPIC-KGDEV 541

Query: 264 KGIITEGDIF------RNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            GII   ++       R+    K    +S  D + ++P  +     L   ++++ + NI 
Sbjct: 542 VGIIEARELLNEALALRSIVNKKKALNVSAGDAVARDPITVPPSATLRDVLKIMAEKNIG 601

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            + VV +  + +G +   D ++ 
Sbjct: 602 FVPVV-EDGRLVGGISESDFVQI 623



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        LGT                ++    P+  A   ++E   G  AVV    K 
Sbjct: 426 FKGWE---TLGTRIWAELAAGKFAKKAVVLPPTAPIRAATQKMAE---GVRAVVIAASKP 479

Query: 264 KGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            G+     + R           V     +    + ED  LT     + ++ +  + +   
Sbjct: 480 VGVFGRRQLIRALASGATPEAEVGRFATR-VDCVSEDAPLTEVFAAMEKYGVRDVPIC-K 537

Query: 323 CQKAIGIVHFLDLL 336
             + +GI+   +LL
Sbjct: 538 GDEVVGIIEARELL 551



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 23/169 (13%), Positives = 52/169 (30%), Gaps = 15/169 (8%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I + D ++ +     + EL       R       A+       VA     V   P     
Sbjct: 535 ICKGDEVVGII---EARELLNEALALRSIVNKKKALNVSAGDAVARDPITV--PPSATLR 589

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
               +    +      + D   +        SE+DF  +     L    +          
Sbjct: 590 DVLKIMAEKNIGFVPVVEDGRLVG-----GISESDFVQI----LLNNTPLDTPVEKVMRR 640

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  ++   P+ +A  ++ +     + VV E  ++ G+++  D+ +   
Sbjct: 641 QLITIEKTRPVKEAAELMVKHNIRHLPVV-EDGRVVGVLSVRDLLKAVA 688


>gi|325969246|ref|YP_004245438.1| signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708449|gb|ADY01936.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 157

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 37/111 (33%), Positives = 61/111 (54%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
             +    V+   PLI  I I++E+  G + + DE  ++ G+ TE D+ R      D++TL
Sbjct: 10  MKEVPVTVRDDEPLISVIRIMNERNIGSIIITDEEGRVIGVFTERDLLRLVASNIDISTL 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +V DVM K+  VI +D  L  A+ ++ +H I  L +VD+  K +GI+   D
Sbjct: 70  TVGDVMTKDVIVIEQDASLIKAVHIMAKHGIRHLPIVDEDGKIVGIISIRD 120



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM + P  + +D  L   ++++ + NI  +++ D+  + IG+    DLLR 
Sbjct: 6   VRDVMKEVPVTVRDDEPLISVIRIMNERNIGSIIITDEEGRVIGVFTERDLLRL 59


>gi|157737269|ref|YP_001489952.1| inosine 5'-monophosphate dehydrogenase [Arcobacter butzleri RM4018]
 gi|315636986|ref|ZP_07892210.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22]
 gi|157699123|gb|ABV67283.1| inosine-5-monophosphate dehydrogenase [Arcobacter butzleri RM4018]
 gi|315478816|gb|EFU69525.1| inosine-5'-monophosphate dehydrogenase [Arcobacter butzleri JV22]
          Length = 481

 Score =  104 bits (259), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 14/170 (8%)

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             +   ++A+  +    A AIA+            ++H    + +  +    V  S   +
Sbjct: 39  LNVPFISAAMDTVTEYQA-AIAMARLGGIG-----IIHKNMDIESQVLQCQKVKKSESGM 92

Query: 231 PL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            +    +K    L DA  I++  +   V VVD+   L GI+T  D+   F KD       
Sbjct: 93  IIDPITIKPEQTLQDAEDIMATYKISGVPVVDDNGILVGILTNRDMR--FTKDYR-FKAS 149

Query: 287 DVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M K P     E T L  A +++ Q+ I  L +V+D  K IG++   D+
Sbjct: 150 EKMTKMPLVTAKEGTTLDEAAEVMHQNKIEKLPIVNDNNKLIGLITIKDI 199


>gi|313157911|gb|EFR57317.1| inosine-5'-monophosphate dehydrogenase [Alistipes sp. HGB5]
          Length = 500

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL            V+H    +         V         
Sbjct: 53  NIPIVSAAMDTVTEAPLAIALAREGGIG-----VIHKNMSIAEQAAQVRRVKRAENGMIY 107

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++ E + G + VVD+   L GI+T  D+   F +D+    +E+V
Sbjct: 108 DPVTISKENTVGDALNLMRENKIGGIPVVDDDNILIGIVTNRDLR--FQRDMMR-RIEEV 164

Query: 289 MIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M    ++I   +  L+ A ++L    I  L VVDD    +G++ + D+ +
Sbjct: 165 MTPGDRLITTHSTELSHASEVLLNSKIEKLPVVDDKGHLVGLITYKDITK 214


>gi|254479428|ref|ZP_05092758.1| inosine-5'-monophosphate dehydrogenase [Carboxydibrachium pacificum
           DSM 12653]
 gi|214034633|gb|EEB75377.1| inosine-5'-monophosphate dehydrogenase [Carboxydibrachium pacificum
           DSM 12653]
          Length = 497

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 55  NIPLMSAGMDTVTEARLAIAIAREGGIG-----VIHKNMSIERQAMEVDKVKRSEHGVIT 109

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  +   V +  +  KL GIIT  DI   F  DL+   + +V
Sbjct: 110 DPFSLSPDHTIRDAAELMARYKISGVPITVDS-KLVGIITNRDIR--FEDDLDK-PIREV 165

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 166 MTKENLVTAPPGTTLEEAKQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 216



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 166 MTKENLVTAPPGTTLEEAKQILKKHKIEKLPLVDENNVLKGLITIKDIEKAVE 218


>gi|20807078|ref|NP_622249.1| IMP dehydrogenase/GMP reductase [Thermoanaerobacter tengcongensis
           MB4]
 gi|20515568|gb|AAM23853.1| IMP dehydrogenase/GMP reductase [Thermoanaerobacter tengcongensis
           MB4]
          Length = 484

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTEARLAIAIAREGGIG-----VIHKNMSIERQAMEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  +   V +  +  KL GIIT  DI   F  DL+   + +V
Sbjct: 97  DPFSLSPDHTIRDAAELMARYKISGVPITVDS-KLVGIITNRDIR--FEDDLDK-PIREV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKENLVTAPPGTTLEEAKQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKENLVTAPPGTTLEEAKQILKKHKIEKLPLVDENNVLKGLITIKDIEKAVE 205


>gi|296332950|ref|ZP_06875408.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672707|ref|YP_003864378.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149914|gb|EFG90805.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305410950|gb|ADM36068.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 488

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|160932446|ref|ZP_02079836.1| hypothetical protein CLOLEP_01281 [Clostridium leptum DSM 753]
 gi|156868405|gb|EDO61777.1| hypothetical protein CLOLEP_01281 [Clostridium leptum DSM 753]
          Length = 492

 Score =  104 bits (259), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+            ++H    +         V  S + + +
Sbjct: 47  NTPLITAAMDTVTEARMAIAISREGGVG-----IIHKNMTIEQQADQVDRVKRSENGVIV 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++++ +   V +  E  KL GIIT  D+     +D  +  + +V
Sbjct: 102 NPFFLSPNHYVSDANNLMAKYKISGVPIC-ENDKLVGIITNRDLRFMTEQD-YSQRIAEV 159

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N       T L  A ++LR+H I  L +VD   +  G++   D+ + 
Sbjct: 160 MTRENLVTAPVGTTLEEAQEILRKHKIEKLPIVDGEGRLKGLITIKDIEKA 210


>gi|332982531|ref|YP_004463972.1| inosine-5'-monophosphate dehydrogenase [Mahella australiensis 50-1
           BON]
 gi|332700209|gb|AEE97150.1| inosine-5'-monophosphate dehydrogenase [Mahella australiensis 50-1
           BON]
          Length = 488

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +    +    V  S   + +
Sbjct: 45  NVPVLSAAMDTVTNAKLAIAIAREGGIG-----IIHKNMSIEEQAMEVDKVKRSEHGVIV 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++ + R   V +VDE  KL GIIT  D+   F  + +   + +V
Sbjct: 100 DPFYLSPRHKVYDAMALMEKYRISGVPIVDENGKLVGIITNRDVR--FETNFDQ-PIANV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N       T L  A ++LR+H I  L +VD+     G++   D+ + 
Sbjct: 157 MTAENLITAPVGTTLEQAQEILRKHKIEKLPLVDENGMLKGLITIKDIEKA 207


>gi|305431911|ref|ZP_07401078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
 gi|304444995|gb|EFM37641.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli JV20]
          Length = 484

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDIASQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V V+D  +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDLR--FENDYSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++  ++ +  L +VD+  +  G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|294619824|ref|ZP_06699213.1| putative transcriptional regulator [Enterococcus faecium E1679]
 gi|291593921|gb|EFF25406.1| putative transcriptional regulator [Enterococcus faecium E1679]
          Length = 251

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 8/195 (4%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIK 64
           K +  +G+S MK S  Q  ++S+I     ++ L+  +           F   +E++KA K
Sbjct: 56  KKLGFRGYSEMKYSLEQSIVQSVIPPTDLIALLKDEINRTFQLADQTNFQPILEQLKAAK 115

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             VV        +      + L  +G P+  +            +T+DD +IV S SG +
Sbjct: 116 TVVVYATGFTQNNFSKDFVNDLILSGRPAMLISGETNFEMLSHTLTKDDFVIVTSLSGET 175

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
             +K+ +       IPL  +T   K+ ++ H+D +L    E    P  L   + +++ L 
Sbjct: 176 PSIKSTIKNLNMNRIPLCGVTELGKNFLSEHSDFLLYY--ETRELPSNLIEGSRSMIGLN 233

Query: 185 IGDALAIALLESRNF 199
           I   L+I   + R F
Sbjct: 234 IL--LSILSRKYREF 246


>gi|15643897|ref|NP_228946.1| hypothetical protein TM1140 [Thermotoga maritima MSB8]
 gi|4981687|gb|AAD36216.1|AE001771_9 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 215

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   +       +A+ ++ + +   + +V + +K+ GI+TE D+             
Sbjct: 7   MTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKNEKIVGIVTEKDLLYASPSKATTLNI 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+ L +E++M K+   + E+T +  A +++ + +IS L VVDD  + +GI+   
Sbjct: 66  WELHYLLSKLKIEEIMTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGRLVGIITQT 125

Query: 334 DLLR 337
           D+ +
Sbjct: 126 DIFK 129



 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+   +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVM-KNEKIVGIVTEKDLL 53



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 16/91 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+ DA  I+ EK    + VVD+  +L GIIT+ DIF+ F        V
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGRLVGIITQTDIFKVF--------V 132

Query: 286 EDVMIKNPKVIL--------EDTLLTVAMQL 308
           E    K    I            LL VA ++
Sbjct: 133 EIFGTKREGTIRYTMEMPDKPGELLEVAKRI 163


>gi|39959|emb|CAA39204.1| IMP dehydrogenase [Bacillus subtilis]
          Length = 513

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|322383132|ref|ZP_08056959.1| inosine 5'-monophosphate dehydrogenase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
 gi|321152794|gb|EFX45420.1| inosine 5'-monophosphate dehydrogenase-like protein [Paenibacillus
           larvae subsp. larvae B-3650]
          Length = 485

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  E         P  S+ M      A+AIA+            ++H    +      
Sbjct: 30  IDISSELSPNVKLNIPFLSSAMDTVTEAAMAIAMAREGGIG-----IIHKNMSIDQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   +            + DA  ++++ R   V +V+E  KL GI+T  D+   
Sbjct: 85  VDRVKRSESGVITNPFSLTPDHHVYDAEALMAKYRISGVPIVNEQNKLVGILTNRDLR-- 142

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D  ++ +++VM   N       T L  A  +L+QH I  L +VD+  +  G++   D
Sbjct: 143 FVHDF-SIQIKEVMTHDNLVTAPVGTTLEQAEVILQQHKIEKLPLVDEHNELKGLITIKD 201

Query: 335 LLRF 338
           + + 
Sbjct: 202 IEKA 205


>gi|313681917|ref|YP_004059655.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM
           16994]
 gi|313154777|gb|ADR33455.1| inosine-5'-monophosphate dehydrogenase [Sulfuricurvum kujiense DSM
           16994]
          Length = 481

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 65/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    + T       V  S   I +
Sbjct: 40  NIPMVSAAMDTVTEYRAAIAMAHLGGIG-----IIHKNMDIETQVKQIKKVKKSESGIII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +A  ++SE R   V VVD   KL GI+T  D+   F KDL  L    V
Sbjct: 95  DPIYVHPDATLAEAEELMSEFRISGVPVVDGHNKLLGILTNRDMR--FEKDLKKL-ASAV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P         L  A Q++ ++ I  L ++D+     G++   D+ +
Sbjct: 152 MTPMPLVTAKAGITLEEAEQIMHKNKIEKLPIIDENGFLKGLITIKDIKK 201


>gi|163751908|ref|ZP_02159121.1| CBS domain protein [Shewanella benthica KT99]
 gi|161328191|gb|EDP99356.1| CBS domain protein [Shewanella benthica KT99]
          Length = 515

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/136 (29%), Positives = 62/136 (45%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H G          S V       PLV      + +A   +   R   V V+D   +L
Sbjct: 77  RLRHQGRFKAKELATTSRVSTLMSKHPLVIDSSSTVGEAAQQMRLVRVSSVLVID-NHQL 135

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   + L+  L V   M   PK +   +L+  AM L+ +H+I+ L +VD
Sbjct: 136 VGILTDRDLRNRVLAEGLDGHLPVHQAMTTRPKTLTSSSLVFEAMLLMSEHSINHLPIVD 195

Query: 322 DCQKAIGIVHFLDLLR 337
           +  K IGI+   D+LR
Sbjct: 196 E-GKPIGIITSTDILR 210


>gi|304440257|ref|ZP_07400147.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
           ATCC BAA-1640]
 gi|304371306|gb|EFM24922.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus duerdenii
           ATCC BAA-1640]
          Length = 483

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSAGMDTVTESAMAIAMARVGGIG-----IIHKNMPIAEQAKEVDRVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+S  +   V +V+E   L+GIIT  DI   F  +     + +V
Sbjct: 95  DPFFLTKDHKIKDALDIMSNYKISGVPIVNEKGHLEGIITNRDIR--FETN-YERPICEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E+  L  A+++L+ H I  L +VDD     G++   D+
Sbjct: 152 MTSENLITAPENISLDDALKILKSHKIEKLPLVDDGNYLKGLITIKDI 199


>gi|217967139|ref|YP_002352645.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
           6724]
 gi|217336238|gb|ACK42031.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus turgidum DSM
           6724]
          Length = 493

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 69/176 (39%), Gaps = 13/176 (7%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
               H   P  SA M       +AIA+            ++H    +         V  S
Sbjct: 38  TDRIHLNIPILSAAMDTVTEARMAIAIAREGGLG-----IIHRNMSIERQAEEVDKVKRS 92

Query: 227 GDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +            + +A++I+++     + VV+   KL GI+T  D+   F  D+N 
Sbjct: 93  EHGMITDPIFLYPDQTVGEALSIMAKYHISGLPVVERDGKLVGIVTNRDLR--FESDMNK 150

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V ++M K N  V      +  A ++L+++ I  L +VD   K  G++   D+ +
Sbjct: 151 -KVSEIMTKDNLIVAQVGITIKDAQEILQRYKIEKLPIVDKDFKLKGLITIKDIQK 205



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 221 SDVMHSGDSIPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +V         + +  P L  A+  ++E R   +A+  EG    GII      RN   +
Sbjct: 29  REVSVDTYLTDRIHLNIPILSAAMDTVTEARM-AIAIAREGG--LGII-----HRNMSIE 80

Query: 280 LNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                V+ V      MI +P  +  D  +  A+ ++ +++IS L VV+   K +GIV   
Sbjct: 81  RQAEEVDKVKRSEHGMITDPIFLYPDQTVGEALSIMAKYHISGLPVVERDGKLVGIVTNR 140

Query: 334 DL 335
           DL
Sbjct: 141 DL 142


>gi|87118536|ref|ZP_01074435.1| CBS domain protein [Marinomonas sp. MED121]
 gi|86166170|gb|EAQ67436.1| CBS domain protein [Marinomonas sp. MED121]
          Length = 673

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 5/117 (4%)

Query: 225 HSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN 281
           H   S  LV+      +  A   ++  R   + VV EG+ L GIIT+ D+  R   K L+
Sbjct: 209 HHIMSRQLVQTTADTSIHMAALQMTGARVSSLLVV-EGETLIGIITDRDLRSRVLAKGLS 267

Query: 282 TL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  +  +M + P  + E +L   A  L+ + NI  L +VDD Q+ +GI+   D+LR
Sbjct: 268 PLMPIATIMTRTPTFLDESSLCIHAQLLMSERNIHHLPIVDDRQRPVGIITATDILR 324



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           A  ++SE+    + +VD+ Q+  GIIT  DI RN  +    L V ++
Sbjct: 292 AQLLMSERNIHHLPIVDDRQRPVGIITATDILRN-QQTSPLLMVSEI 337



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R       +L +  +M +       DT + +A   +    +S L+VV + +  IGI+   
Sbjct: 197 RANPAMQLSLPLHHIMSRQLVQTTADTSIHMAALQMTGARVSSLLVV-EGETLIGIITDR 255

Query: 334 DL 335
           DL
Sbjct: 256 DL 257


>gi|220932880|ref|YP_002509788.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
           168]
 gi|219994190|gb|ACL70793.1| inosine-5'-monophosphate dehydrogenase [Halothermothrix orenii H
           168]
          Length = 486

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +G        V  S   + +
Sbjct: 41  NIPIMSAGMDTVTEARLAIAMARQGGIG-----IIHKNMSIGRQAEEVDRVKRSESGVIV 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     +++A  ++S+ +   V +VDE +KL GIIT  D+   F KD N   + +V
Sbjct: 96  DPFYLKPDNLIVEAEALMSKFKISGVPIVDENRKLVGIITNRDLR--FVKDYNR-PIHEV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  ++       T +  A ++L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTDEDLVTAPVGTTIEQAKEILQEHKIEKLPLVDENNILKGLITIKDIEKA 203


>gi|183981158|ref|YP_001849449.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           marinum M]
 gi|183174484|gb|ACC39594.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           marinum M]
          Length = 532

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 42  KVAMLGLTFDDVLLLPAASDVVPSTADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 101

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGC 253
            +        +   P  +  +             + P+  +    L     + +  R   
Sbjct: 102 RAGGMG--VLHRNLPVAEQASQVETVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 159

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR+H
Sbjct: 160 LPVVDDAGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRH 216

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 217 KIEKLPVVDGSGRLTGLITVKDFVK 241


>gi|167038115|ref|YP_001665693.1| response regulator receiver protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|167039173|ref|YP_001662158.1| response regulator receiver protein [Thermoanaerobacter sp. X514]
 gi|256750855|ref|ZP_05491739.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300913232|ref|ZP_07130549.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp.
           X561]
 gi|307723754|ref|YP_003903505.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp.
           X513]
 gi|320116521|ref|YP_004186680.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
 gi|166853413|gb|ABY91822.1| response regulator receiver protein [Thermoanaerobacter sp. X514]
 gi|166856949|gb|ABY95357.1| response regulator receiver protein [Thermoanaerobacter
           pseudethanolicus ATCC 33223]
 gi|256750190|gb|EEU63210.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter
           ethanolicus CCSD1]
 gi|300889917|gb|EFK85062.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp.
           X561]
 gi|307580815|gb|ADN54214.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter sp.
           X513]
 gi|319929612|gb|ADV80297.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacter brockii
           subsp. finnii Ako-1]
          Length = 484

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 42  NIPLMSAGMDTVTESKLAIAIAREGGIG-----VIHKNMSIERQALEVDKVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  +++  +   V +  +  KL GIIT  DI   F  DL+   + +V
Sbjct: 97  DPFSLTPDHTIKDAAELMARYKISGVPITVDS-KLVGIITNRDIR--FEDDLDK-PIREV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A Q+L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKA 203



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D++     G  L +A  IL + +   + +VDE   LKG+IT  DI +   
Sbjct: 153 MTKDNLVTAPPGTTLEEARQILKKHKIEKLPLVDENNVLKGLITIKDIEKAVE 205


>gi|124009745|ref|ZP_01694415.1| transaldolase [Microscilla marina ATCC 23134]
 gi|123984250|gb|EAY24599.1| transaldolase [Microscilla marina ATCC 23134]
          Length = 344

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 75/167 (44%), Gaps = 6/167 (3%)

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH-SGDSIPLVKIGCP 238
              ++    +       +  + N+F  +     +    +   +V     D  P+VK    
Sbjct: 178 TAIMSGVHTITAPWKVMKTLTSNNFTTVGTDQFVEHTRLMTENVKDVMQDFNPVVKDDET 237

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTLSVEDVMIKNPK 294
           + DA++ ++E   G V++V+   +LKGI T+GD+ RN  +     L+    + V   NP 
Sbjct: 238 IFDALSKMTESGLGAVSIVNGTGELKGIFTDGDLRRNLKEKGKAFLDNKMADCVSSANPI 297

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            I ++  L  A+ L ++  I  ++V+    K +G++   D ++  ++
Sbjct: 298 TITQEARLYDAVALFKEKEIDTIIVM-ANNKPVGMLDIQDFVKQNLV 343


>gi|18313720|ref|NP_560387.1| hypothetical protein PAE2961 [Pyrobaculum aerophilum str. IM2]
 gi|18161274|gb|AAL64569.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score =  103 bits (258), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + D    + E R G V ++D+  K  GI+TE D+     + L        VM +N
Sbjct: 25  KENEKIRDIAIKMYENRVGSVVIIDDEGKPIGIVTERDMVYVLARALPPDTPAWMVMTEN 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P VI E+ L+  AM  +R+ NI  L VVD   K +G+V F D++
Sbjct: 85  PVVINENALVIEAMDKMRELNIRHLPVVDQSGKVVGMVSFRDIV 128



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M+KN     E+  +      + ++ +  ++++DD  K IGIV   D++
Sbjct: 11  LRVSDIMVKNVITAKENEKIRDIAIKMYENRVGSVVIIDDEGKPIGIVTERDMV 64



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              M   ++  ++     +I+A+  + E     + VVD+  K+ G+++  DI
Sbjct: 76  PAWMVMTENPVVINENALVIEAMDKMRELNIRHLPVVDQSGKVVGMVSFRDI 127


>gi|291295216|ref|YP_003506614.1| inosine-5'-monophosphate dehydrogenase [Meiothermus ruber DSM 1279]
 gi|290470175|gb|ADD27594.1| inosine-5'-monophosphate dehydrogenase [Meiothermus ruber DSM 1279]
          Length = 504

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 65/167 (38%), Gaps = 6/167 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+             L P  +   +                
Sbjct: 52  NIPIISAAMDTVTEAEMAIAMAREGGLGIIH-KNLSPDEQAAMVRKVKRSEAGMIQDPVT 110

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L DA  ++ E + G + VVD   KL G++T  D+   F +D+  L V +VM   
Sbjct: 111 LAPNATLEDAERLMREFKIGGLPVVDFYGKLLGLVTNRDLR--FERDMGRL-VAEVMTPV 167

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                    T+L  A QLLRQH I  L +VD   +  G++   DL +
Sbjct: 168 ERLVTAPPGTILEEAEQLLRQHKIEKLPLVDHEGRLRGLLTLKDLTK 214


>gi|312199962|ref|YP_004020023.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EuI1c]
 gi|311231298|gb|ADP84153.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EuI1c]
          Length = 544

 Score =  103 bits (258), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 75/208 (36%), Gaps = 22/208 (10%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-- 195
           ++ +T ++  ++   +D+V   +              P  S+ M       +AIA+    
Sbjct: 51  MLGLTYDDVLLLPAASDVVPAEVDTSTRLSRNIRLAIPLVSSAMDTVTEHRMAIAMARQG 110

Query: 196 -----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
                 RN S  D        +   + +          +         + +A  +++  R
Sbjct: 111 GVGVLHRNLSVED--------QAQQVDMVKRSESGMISAPITCGPDASIDEANAMMARYR 162

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLL 309
              V V  E   L GI+T  DI   F +D     V +VM   P +          A++LL
Sbjct: 163 ISGVPVTGEDGTLLGIVTNRDIR--FERDFAR-PVREVMTPMPLITAPVGVSSDEALRLL 219

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           RQH I  L +VD   +  G++   D  +
Sbjct: 220 RQHKIEKLPIVDGRGRLCGLITVKDFTK 247


>gi|118616668|ref|YP_905000.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium ulcerans
           Agy99]
 gi|118568778|gb|ABL03529.1| inosine-5'-monophosphate (imp) dehydrogenase, GuaB2 [Mycobacterium
           ulcerans Agy99]
          Length = 532

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 77/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 42  KVAMLGLTFDDVLLLPAASDVVPSTADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 101

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGC 253
            +        +   P  +  +             + P+  +    L     + +  R   
Sbjct: 102 RAGGMG--VLHRNLPVAEQASQVETVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 159

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR+H
Sbjct: 160 LPVVDDAGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRH 216

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 217 KIEKLPVVDGSGRLTGLITVKDFVK 241


>gi|317126752|ref|YP_004093034.1| inosine-5'-monophosphate dehydrogenase [Bacillus cellulosilyticus
           DSM 2522]
 gi|315471700|gb|ADU28303.1| inosine-5'-monophosphate dehydrogenase [Bacillus cellulosilyticus
           DSM 2522]
          Length = 485

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 70/171 (40%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAKMAIAIAREGGLG-----IIHKNMSIEEQAEQVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++S+ R   V + DE QKL GIIT  D+   F +D  ++ ++DV
Sbjct: 98  NPFFLSENHQVFDAEHLMSKYRISGVPIADENQKLVGIITNRDLR--FIED-YSIPIKDV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K   V     T L  A ++L+++ I  L +VDD     G++   D+ + 
Sbjct: 155 MTKEGLVTAPVGTTLAEAQKVLQKYKIEKLPLVDDNGVLKGLITIKDIEKA 205



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + + +    +G  L +A  +L + +   + +VD+   LKG+IT  DI +   
Sbjct: 152 KDVMTKEGLVTAPVGTTLAEAQKVLQKYKIEKLPLVDDNGVLKGLITIKDIEKAIE 207


>gi|261403042|ref|YP_003247266.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
 gi|261370035|gb|ACX72784.1| protein of unknown function DUF39 [Methanocaldococcus vulcanius M7]
          Length = 507

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +++A  IL E     + +VD+  +L GIIT  DI +   +  N  ++E++M KN 
Sbjct: 400 PCNISIMEAAKILIEYNINHLPIVDDLGRLVGIITSWDIAKALAQ--NKKTIEEIMTKNV 457

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ED       + +  +NIS + VVDD ++ +G+V   D+ R 
Sbjct: 458 ITAHEDEPADHVARKMSINNISGVPVVDDHKRVVGVVTSEDISRL 502



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K P     +  +  A ++L ++NI+ L +VDD  + +GI+   D+ + 
Sbjct: 388 VKDILSKPPITAPCNISIMEAAKILIEYNINHLPIVDDLGRLVGIITSWDIAKA 441



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P       +S      V VVD+ +++ G++T 
Sbjct: 439 AKALAQNKKTIEEIMTKNVITA--HEDEPADHVARKMSINNISGVPVVDDHKRVVGVVTS 496

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 497 EDISRLFG 504


>gi|289641114|ref|ZP_06473282.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca
           glomerata]
 gi|289509055|gb|EFD29986.1| inosine-5'-monophosphate dehydrogenase [Frankia symbiont of Datisca
           glomerata]
          Length = 516

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 49/208 (23%), Positives = 76/208 (36%), Gaps = 32/208 (15%)

Query: 151 VVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLE-- 195
            +    D VL LP E +  P                 P  S+ M       +AIA+    
Sbjct: 23  TLGLTFDDVLLLPAESDIMPSEADTSTWLSRHIRLAIPMLSSAMDTVTESRMAIAMARQG 82

Query: 196 -----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
                 RN S +D        +   + +          S         + +A  +++  R
Sbjct: 83  GVGVLHRNLSVDD--------QAQQVDMVKRSESGMITSPITCGPDATIDEANELMARYR 134

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLL 309
              V V +   +L GI+T  DI   F +D ++ SV DVM   P V          A+ LL
Sbjct: 135 ISGVPVTESDGRLLGIVTNRDIR--FERD-HSRSVRDVMTPMPLVTAPVGVSADDALALL 191

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           R+H I  L +VDD  +  G++   D  +
Sbjct: 192 RRHKIEKLPLVDDRGRLRGLITVKDFTK 219


>gi|320333882|ref|YP_004170593.1| inosine-5'-monophosphate dehydrogenase [Deinococcus maricopensis
           DSM 21211]
 gi|319755171|gb|ADV66928.1| inosine-5'-monophosphate dehydrogenase [Deinococcus maricopensis
           DSM 21211]
          Length = 488

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 16/203 (7%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            IT ++  ++  +++++   + L  +         P  SA M      A+AIA+      
Sbjct: 14  GITFDDVLLLPRYSEVLPHQVDLGAQLTRRVRLNVPFVSAAMDTVTETAMAIAMAREGGI 73

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVA 255
                 V+H    +         V  S   + +    + +   + +A  +++E +   V 
Sbjct: 74  G-----VIHKNMPIERQAEMVRKVKRSESGMIVDPITLPVTATVREADQMMAEYKISGVP 128

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNI 314
           +  +  KL GIIT  D+   F +DL ++ V DVM K+    +   T L  A ++ +QH I
Sbjct: 129 ITADDGKLLGIITNRDMR--FIEDL-SVPVADVMTKDQLITVPVGTSLETAQEIFKQHRI 185

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L+V DD     G++   D+ +
Sbjct: 186 EKLLVTDDAGYLKGLITIKDIAK 208


>gi|297565548|ref|YP_003684520.1| inosine-5'-monophosphate dehydrogenase [Meiothermus silvanus DSM
           9946]
 gi|296849997|gb|ADH63012.1| inosine-5'-monophosphate dehydrogenase [Meiothermus silvanus DSM
           9946]
          Length = 503

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 62/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  +A M     + +A+A+            V+H              V  S      
Sbjct: 52  NVPIIAAAMDTVSEERMAVAMAREGGL-----AVIHKNMMAEEQAEMVRKVKRSEAGMIQ 106

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E + G + V+D   KL G++T  DI    H       V +V
Sbjct: 107 DPVTLPPTATLEDAERLMREYKIGGLPVIDVYGKLMGLVTNRDIRFEHH---LKRPVSEV 163

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A  +LRQH +  L +VD   K  G++   DL++
Sbjct: 164 MTPLERLITAPPGTTLEEAENILRQHKVEKLPLVDAEGKLKGLLTLKDLVK 214


>gi|310639558|ref|YP_003944316.1| inosine-5-monophosphate dehydrogenase [Paenibacillus polymyxa SC2]
 gi|309244508|gb|ADO54075.1| Inosine-5-monophosphate dehydrogenase [Paenibacillus polymyxa SC2]
          Length = 485

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    V    V  S   +  
Sbjct: 43  NIPLMSAGMDTVTEAVLAIAMAREGGIG-----VIHKNMSIEQQAVEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V VV+E  KL GIIT  D+          L + +V
Sbjct: 98  NPFSLTPDHLVSDAEAVMGKYRISGVPVVNEENKLVGIITNRDLRFI---HNFDLKISEV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K   V     T L  A  +L++H I  L +VD+     G++   D+ + 
Sbjct: 155 MTKEELVTAPVGTTLQEAEVILQKHKIEKLPLVDEGNYLKGLITIKDIEKA 205


>gi|170727179|ref|YP_001761205.1| CBS domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169812526|gb|ACA87110.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella woodyi ATCC 51908]
          Length = 615

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H            S V     + PL+  I   + DA   + E R   V V+D   KL
Sbjct: 134 RLRHQARFKAKELTTTSRVSSLMSNNPLIIDINASVSDAAKKMREARVSSVLVID-NHKL 192

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   +  + +L V   M   PKV+  + L+  AM L+ +H I  L +VD
Sbjct: 193 CGILTDRDLRNRVLAEGQDGSLPVHQAMTTQPKVLSSNALVFEAMLLMSEHGIHHLPIVD 252

Query: 322 DCQKAIGIVHFLDLLR 337
           D  +A+G++   D+LR
Sbjct: 253 DE-RAVGVLTSTDILR 267


>gi|57167939|ref|ZP_00367078.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
 gi|57020313|gb|EAL56982.1| inosine-5'-monophosphate dehydrogenase [Campylobacter coli RM2228]
          Length = 484

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGLG-----VIHKNMDITSQVREVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A+ I++E R   V V+D  +KL GI+T  D+   F  D + L VE+V
Sbjct: 95  DPIFVGPKASVAEALEIMAEYRISGVPVIDSDRKLIGILTNRDLR--FENDYSNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++  ++ +  L +VD+  +  G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSKNKVEKLPIVDEQGRLEGLITIKDLKK 201


>gi|218781691|ref|YP_002433009.1| signal transduction protein with CBS domains [Desulfatibacillum
           alkenivorans AK-01]
 gi|218763075|gb|ACL05541.1| putative signal transduction protein with CBS domains
           [Desulfatibacillum alkenivorans AK-01]
          Length = 202

 Score =  103 bits (257), Expect = 4e-20,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIK 291
           V +   + +AI ++       + VV++G  L+G +T  D+ +     +   LS+ D+MIK
Sbjct: 14  VDVNASISEAIKLMQGNSIRHLPVVEKGGVLRGFVTLSDLKQGLIPSMVGDLSLTDLMIK 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           NP  +  D  +  A Q++ +  I  L VVDD    +GI+   D+LR 
Sbjct: 74  NPITVKPDEDVEDAAQIIYRKKIGGLPVVDDNNHLLGIITVTDILRA 120



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + +E +M+KNP  +  +  ++ A++L++ ++I  L VV+      G V   DL + G+I
Sbjct: 1   MRIESLMVKNPLCVDVNASISEAIKLMQGNSIRHLPVVEKGGVLRGFVTLSDL-KQGLI 58



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
              +   VK    + DA  I+  K+ G + VVD+   L GIIT  DI R F + +  L+
Sbjct: 71  MIKNPITVKPDEDVEDAAQIIYRKKIGGLPVVDDNNHLLGIITVTDILRAFVEMMGILT 129


>gi|312131548|ref|YP_003998888.1| inosine-5'-monophosphate dehydrogenase [Leadbetterella byssophila
           DSM 17132]
 gi|311908094|gb|ADQ18535.1| inosine-5'-monophosphate dehydrogenase [Leadbetterella byssophila
           DSM 17132]
          Length = 489

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 70/171 (40%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          ++H    +         V  S   + +
Sbjct: 44  NLPLVSAAMDTVTEHEMAIAIAQEGGIG-----IIHKNMSIEEQADQVRKVKRSESGMII 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+ E + G + V+D   +LKGI+T  D+   F  D+ +L +  V
Sbjct: 99  DPITLDESSLVGDALRIMREFKVGGIPVIDSENRLKGIVTNRDLR--FQSDM-SLPITQV 155

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +      E   L  A  +L +  I  L +VD   K +G++ + D+L+ 
Sbjct: 156 MTVERLVTAGEGITLEEAEHILMREKIEKLPIVDKDNKLVGLITYRDILKK 206



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 24/44 (54%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            G  L +A  IL  ++   + +VD+  KL G+IT  DI +  +K
Sbjct: 166 EGITLEEAEHILMREKIEKLPIVDKDNKLVGLITYRDILKKLNK 209


>gi|308373735|ref|ZP_07433498.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308377342|ref|ZP_07441900.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308406150|ref|ZP_07495301.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|308336524|gb|EFP25375.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu005]
 gi|308348210|gb|EFP37061.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu008]
 gi|308364355|gb|EFP53206.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu012]
 gi|323717898|gb|EGB27087.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CDC1551A]
          Length = 525

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 35  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 94

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 95  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 152

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR++
Sbjct: 153 LPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRN 209

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 210 KIEKLPVVDGRGRLTGLITVKDFVK 234


>gi|328958775|ref|YP_004376161.1| inosine 5'-monophosphate dehydrogenase [Carnobacterium sp. 17-4]
 gi|328675099|gb|AEB31145.1| inosine 5'-monophosphate dehydrogenase [Carnobacterium sp. 17-4]
          Length = 496

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 35  VDLSVQLAKNIKLNVPIMSASMDTVTDSRMAIAMARQGGLG-----VIHKNMTIQQQADE 89

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + L          + +A  ++S  R   V +V+  + + L GI+T  D+ 
Sbjct: 90  VRKVKRSESGVILDPFFLTPTHSVSEAEQLMSRYRISGVPIVNTMDERILVGILTNRDLR 149

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D  ++ +++VM K N       T L  A Q+L+QH I  L +VD   +  G++  
Sbjct: 150 --FVAD-YSIQIDEVMTKENLVTAPTGTSLKEAEQILQQHKIEKLPIVDQNGRLSGLITI 206

Query: 333 LDL 335
            D+
Sbjct: 207 KDI 209



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++     G  L +A  IL + +   + +VD+  +L G+IT  DI +   
Sbjct: 162 MTKENLVTAPTGTSLKEAEQILQQHKIEKLPIVDQNGRLSGLITIKDIEKILE 214


>gi|283850322|ref|ZP_06367611.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B]
 gi|283574348|gb|EFC22319.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. FW1012B]
          Length = 485

 Score =  103 bits (257), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 45/168 (26%), Positives = 69/168 (41%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI+L            V+H    +    +    V  S   + +
Sbjct: 41  NIPLVSAAMDTVTESRMAISLARCGGVG-----VVHKNMTIAEQRLEVEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+ ++SE     + VVDE   L GI+T  D+   F KD +   V+DV
Sbjct: 96  SPITVPPEMTVEQALVVMSEYSISGLPVVDE-GTLVGIVTNRDVR--FVKD-SVTKVKDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K +   +   T L  A   L Q+ I  L+VVD+  K  G++   D+
Sbjct: 152 MTKESLVTVPVGTTLEEAKHHLHQNRIEKLLVVDENNKLRGLITIKDI 199


>gi|317051163|ref|YP_004112279.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum
           S5]
 gi|316946247|gb|ADU65723.1| inosine-5'-monophosphate dehydrogenase [Desulfurispirillum indicum
           S5]
          Length = 489

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V  S   + +
Sbjct: 42  NIPIVSAAMDTVTEGRLAIAIAQEGGIG-----IIHKNMSIERQADEVDKVKRSESGMIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++S+ +   V V  EG +L GI+T  D+   F KD  T  V + 
Sbjct: 97  DPITIGPDAMIKDAEELMSKYKISGVPVTVEGNRLVGILTNRDLR--FCKD-YTRKVSEY 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN   +     L  A  +L +H I  L+VVD+     G++   D+
Sbjct: 154 MTSKNLVTVSMGISLEAAADILHEHRIEKLLVVDNDNTLKGLITTKDI 201



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +        +  ++  V +G  L  A  IL E R   + VVD    LKG+IT  DI + 
Sbjct: 146 YTRKVSEYMTSKNLVTVSMGISLEAAADILHEHRIEKLLVVDNDNTLKGLITTKDIEKR 204


>gi|215405448|ref|ZP_03417629.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|215413318|ref|ZP_03422003.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
 gi|215447740|ref|ZP_03434492.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|289747240|ref|ZP_06506618.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|289759571|ref|ZP_06518949.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|294995815|ref|ZP_06801506.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           210]
 gi|298526894|ref|ZP_07014303.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
 gi|289687768|gb|EFD55256.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           02_1987]
 gi|289715135|gb|EFD79147.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T85]
 gi|298496688|gb|EFI31982.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           94_M4241A]
          Length = 529

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 39  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 98

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 99  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 156

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR++
Sbjct: 157 LPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRN 213

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 214 KIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|15610547|ref|NP_217928.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Rv]
 gi|15843006|ref|NP_338043.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CDC1551]
 gi|31794592|ref|NP_857085.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium bovis
           AF2122/97]
 gi|121639336|ref|YP_979560.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium bovis BCG
           str. Pasteur 1173P2]
 gi|148663275|ref|YP_001284798.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148824618|ref|YP_001289372.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           F11]
 gi|167968703|ref|ZP_02550980.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|215428913|ref|ZP_03426832.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T92]
 gi|215432378|ref|ZP_03430297.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|218755192|ref|ZP_03533988.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           GM 1503]
 gi|224991832|ref|YP_002646521.1| inosine-5-monophosphate dehydrogenase [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253800458|ref|YP_003033459.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|254366022|ref|ZP_04982067.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|254552516|ref|ZP_05142963.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260188466|ref|ZP_05765940.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CPHL_A]
 gi|260202511|ref|ZP_05770002.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|260206777|ref|ZP_05774268.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           K85]
 gi|289444932|ref|ZP_06434676.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|289449110|ref|ZP_06438854.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289555687|ref|ZP_06444897.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289576144|ref|ZP_06456371.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis K85]
 gi|289752130|ref|ZP_06511508.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis T92]
 gi|289755541|ref|ZP_06514919.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|289763594|ref|ZP_06522972.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|297636073|ref|ZP_06953853.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN 4207]
 gi|297733073|ref|ZP_06962191.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN R506]
 gi|313660404|ref|ZP_07817284.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           KZN V2475]
 gi|54037423|sp|P65168|IMDH_MYCBO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|54041389|sp|P65167|IMDH_MYCTU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1449376|emb|CAB01012.1| PROBABLE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE GUAB2 (IMP
           DEHYDROGENASE) (INOSINIC ACID DEHYDROGENASE) (INOSINATE
           DEHYDROGENASE) (IMP OXIDOREDUCTASE)
           (INOSINE-5'-MONOPHOSPHATE OXIDOREDUCTASE) (IMPDH) (IMPD)
           [Mycobacterium tuberculosis H37Rv]
 gi|13883347|gb|AAK47857.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           CDC1551]
 gi|31620189|emb|CAD95632.1| PROBABLE INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE GUAB2 (IMP
           DEHYDROGENASE) (INOSINIC ACID DEHYDROGENASE) (INOSINATE
           DEHYDROGENASE) (IMP OXIDOREDUCTASE)
           (INOSINE-5'-MONOPHOSPHATE OXIDOREDUCTASE) (IMPDH) (IMPD)
           [Mycobacterium bovis AF2122/97]
 gi|121494984|emb|CAL73470.1| Probable inosine-5'-monophosphate dehydrogenase guaB2
           [Mycobacterium bovis BCG str. Pasteur 1173P2]
 gi|134151535|gb|EBA43580.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis str. Haarlem]
 gi|148507427|gb|ABQ75236.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           H37Ra]
 gi|148723145|gb|ABR07770.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis F11]
 gi|224774947|dbj|BAH27753.1| inosine-5-monophosphate dehydrogenase [Mycobacterium bovis BCG str.
           Tokyo 172]
 gi|253321961|gb|ACT26564.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 1435]
 gi|289417851|gb|EFD15091.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T46]
 gi|289422068|gb|EFD19269.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis CPHL_A]
 gi|289440319|gb|EFD22812.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 605]
 gi|289540575|gb|EFD45153.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis K85]
 gi|289692717|gb|EFD60146.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis T92]
 gi|289696128|gb|EFD63557.1| inositol-5-monophosphate dehydrogenase [Mycobacterium tuberculosis
           EAS054]
 gi|289711100|gb|EFD75116.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis GM 1503]
 gi|328460190|gb|AEB05613.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis KZN 4207]
          Length = 529

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 39  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 98

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 99  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 156

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR++
Sbjct: 157 LPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRN 213

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 214 KIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|171186207|ref|YP_001795126.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170935419|gb|ACB40680.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 139

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + +    + E + G V VVD+  +  GI+TE D+     + L     V  VM ++
Sbjct: 25  KENERVREVAIRMYENKVGSVVVVDDEGRPVGIVTERDLVYVVARALAPDTPVWMVMTED 84

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P VI E+ L+T AM+ +RQ +I  L VVD   K +G+V F D++
Sbjct: 85  PVVINENALVTEAMEKMRQLDIRHLPVVDSAGKLVGMVSFRDIV 128



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M+KN     E+  +      + ++ +  ++VVDD  + +GIV   DL+
Sbjct: 11  LRVSDIMVKNVVTAKENERVREVAIRMYENKVGSVVVVDDEGRPVGIVTERDLV 64



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 23/60 (38%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              L       M   +   ++     + +A+  + +     + VVD   KL G+++  DI
Sbjct: 68  ARALAPDTPVWMVMTEDPVVINENALVTEAMEKMRQLDIRHLPVVDSAGKLVGMVSFRDI 127


>gi|156938201|ref|YP_001435997.1| hypothetical protein [Ignicoccus hospitalis KIN4/I]
 gi|156567185|gb|ABU82590.1| CBS domain containing protein [Ignicoccus hospitalis KIN4/I]
          Length = 127

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VE 286
             I        L + +  +     G V +++ G +L GI TE D+ R F +       V 
Sbjct: 9   REIVWCPPNSTLKEVVHKMRAHNVGSVLILN-GDELVGIFTERDLVRAFDEGAKPEDLVS 67

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D M +NP V+  +  L  A+Q +  H I  L VV    + +G+V   D++  
Sbjct: 68  DFMTRNPIVVNPEESLESALQKMLAHGIRHLPVVSPEGRVLGVVSLRDVVEA 119



 Score = 36.0 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 7/51 (13%), Positives = 18/51 (35%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +  +V     L  A+  +       + VV    ++ G+++  D+    
Sbjct: 70  MTRNPIVVNPEESLESALQKMLAHGIRHLPVVSPEGRVLGVVSLRDVVEAL 120


>gi|291543353|emb|CBL16462.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus sp. 18P13]
          Length = 489

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+            ++H    +         V  S + + +
Sbjct: 45  KTPIMTSAMDTVTESKMAIAIAREGGIG-----IIHKNMSIEKQADEVDKVKRSENGVIV 99

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + +   V +VD   KL GIIT  D+   F  D NT  + DV
Sbjct: 100 NPFSLTENHFVYDADELMGKYKISGVPIVDNEGKLVGIITNRDMR--FMTDFNT-RIADV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++LR H I  L +VD      G++   D+
Sbjct: 157 MTKDNLVTAPVGTTLQEAQEILRAHKIEKLPLVDQDGYLKGLITIKDI 204


>gi|119898492|ref|YP_933705.1| putative nucleotidyltransferase [Azoarcus sp. BH72]
 gi|119670905|emb|CAL94818.1| putative nucleotidyltransferase [Azoarcus sp. BH72]
          Length = 632

 Score =  103 bits (256), Expect = 5e-20,   Method: Composition-based stats.
 Identities = 40/216 (18%), Positives = 75/216 (34%), Gaps = 23/216 (10%)

Query: 140 PLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+ AI+++  S    +A        +  +       ++P             +A  L +S
Sbjct: 93  PIGAISAQRPSTNAYIAVEDSFCFQISSDQFLELMQMSPVFHLFCT----QYIASLLNQS 148

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R   +  F             +          +   V    P   A+  ++ +  GC+ V
Sbjct: 149 RQQLQTSFAQR----AAEQQTMTTQLGQLVKKAPVFVAPETPTRRALEEMAAQHLGCMIV 204

Query: 257 VDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            D+ Q+  GI+T+ D+           +L + +VM  NP  +        A   +  H +
Sbjct: 205 ADDDQRPLGILTQSDLLPRVVLAGFDLSLPISEVMTANPHQLPATASAYDAALEMATHGV 264

Query: 315 SVLMVVDDCQKAIGIVHFLDL----------LRFGI 340
             L+V+D   +  G+V   DL          +R GI
Sbjct: 265 RHLLVIDSDGRLKGVVSERDLFSLQRISLRQIRAGI 300


>gi|326905255|gb|EGE52188.1| LOW QUALITY PROTEIN: inosine-5-monophosphate dehydrogenase guaB2
           [Mycobacterium tuberculosis W-148]
          Length = 525

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 39  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 98

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 99  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 156

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR++
Sbjct: 157 LPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRN 213

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 214 KIEKLPVVDGRGRLTGLITVKDFVK 238


>gi|16077077|ref|NP_387890.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221307818|ref|ZP_03589665.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312140|ref|ZP_03593945.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317073|ref|ZP_03598367.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321336|ref|ZP_03602630.1| inositol-5'-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321313676|ref|YP_004205963.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
 gi|34395945|sp|P21879|IMDH_BACSU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH; AltName:
           Full=Superoxide-inducible protein 12; Short=SOI12
 gi|467399|dbj|BAA05245.1| IMP dehydrogenase [Bacillus subtilis]
 gi|2632276|emb|CAB11785.1| inosine-monophosphate dehydrogenase [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|320019950|gb|ADV94936.1| inosine 5'-monophosphate dehydrogenase [Bacillus subtilis BSn5]
          Length = 488

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|282896431|ref|ZP_06304452.1| Predicted signal transduction protein containing CBS domain
           proteins [Raphidiopsis brookii D9]
 gi|281198719|gb|EFA73599.1| Predicted signal transduction protein containing CBS domain
           proteins [Raphidiopsis brookii D9]
          Length = 152

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  +V    PL  AI IL+EK+   + VVD+  KL GII+E D+             
Sbjct: 9   MTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLMWQETGITPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + +DL+     +V +VM  NP  I  D  L  A ++++ H +  L 
Sbjct: 69  MFLDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKAAAKIIQDHKVRRLP 128

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVDD    IGI+   D++R 
Sbjct: 129 VVDDSATVIGILTRGDIIRA 148



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/55 (40%), Positives = 32/55 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +V  VM  NP ++   T L  A+Q+L +  IS L VVDD  K +GI+   DL+
Sbjct: 2   SKTVAQVMTHNPIMVNPQTPLKQAIQILAEKQISGLPVVDDMGKLVGIISETDLM 56



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             ++   +     L  A  I+ + +   + VVD+   + GI+T GDI R    D
Sbjct: 99  MSNNPITISPDQSLKAAAKIIQDHKVRRLPVVDDSATVIGILTRGDIIRAMAYD 152


>gi|127513297|ref|YP_001094494.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
 gi|126638592|gb|ABO24235.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
          Length = 615

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 8/146 (5%)

Query: 197 RNFSENDFYVL--HPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGC 253
           R F+   F     H G          + V       PL   I   + DA  ++ + R   
Sbjct: 125 RFFNRA-FAKRLRHQGRFKAKELGSTNRVSSLMSKQPLCLDINASVSDAARLMRDNRVSS 183

Query: 254 VAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           V ++D  QKL GI+T+ D+  R   + L+ +L V   M   P  +  + L+  AM L+ Q
Sbjct: 184 VLIID-NQKLAGILTDRDLRNRVLAESLDGSLPVHQAMTVTPTTLSANALVFEAMLLMSQ 242

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           HNI  L ++D+    IG++   D+LR
Sbjct: 243 HNIHHLPIMDE-GHPIGVITSTDILR 267


>gi|219852650|ref|YP_002467082.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
           E1-9c]
 gi|219546909|gb|ACL17359.1| inosine-5'-monophosphate dehydrogenase [Methanosphaerula palustris
           E1-9c]
          Length = 490

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 10/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    +       + V  + + I  
Sbjct: 45  NIPLVSSAMDTVTESTMAIAIAREGGIG-----VLHRNMSVEEEIRQITIVKQAEELIER 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D   +++    G V V+D+ Q++ GI++  D+ R         S+  +
Sbjct: 100 DVQSVTPESTVADVERLMNIHGIGGVPVLDDDQRIIGIVSRRDV-RAIVSKRGAESIRTI 158

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K P    E+  +  A++++  + +  L VV+  ++ +GI+   D+L
Sbjct: 159 MTKQPITTGENINIDDALEVMYTNKVERLPVVNSEKRLLGIITMQDIL 206


>gi|291482379|dbj|BAI83454.1| inositol-5-monophosphate dehydrogenase [Bacillus subtilis subsp.
           natto BEST195]
          Length = 488

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVNNEEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLDEAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|94984655|ref|YP_604019.1| inosine-5'-monophosphate dehydrogenase [Deinococcus geothermalis
           DSM 11300]
 gi|94554936|gb|ABF44850.1| inosine-5'-monophosphate dehydrogenase [Deinococcus geothermalis
           DSM 11300]
          Length = 547

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 105 NIPFVSAAMDTVTETRMAIAMAREGGIG-----VIHKNMPVDAQAEMVRKVKRSESGMIV 159

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  +++E +   V + D   KL GIIT  D+   F +D     VEDV
Sbjct: 160 DPITLPPTASVGEADRLMAEYKISGVPITDPAGKLLGIITNRDMR--FVED-PATPVEDV 216

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + N   +   T L  A  + ++H I  L+V D+     G++   DL +
Sbjct: 217 MTRENLVTVPVGTTLEEAQAIFKRHRIEKLLVTDEAGFLRGLITIKDLTK 266



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 47/122 (38%), Gaps = 15/122 (12%)

Query: 221 SDVMHSGDSIPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +V         V++  P +  A+  ++E R       + G    G+I      +N   D
Sbjct: 90  HEVSVEAQLTRRVRLNIPFVSAAMDTVTETRMAIAMAREGG---IGVI-----HKNMPVD 141

Query: 280 LNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                V  V      MI +P  +     +  A +L+ ++ IS + + D   K +GI+   
Sbjct: 142 AQAEMVRKVKRSESGMIVDPITLPPTASVGEADRLMAEYKISGVPITDPAGKLLGIITNR 201

Query: 334 DL 335
           D+
Sbjct: 202 DM 203



 Score = 36.0 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + + + +++  V +G  L +A  I    R   + V DE   L+G+IT  D+ +  
Sbjct: 214 EDVMTRENLVTVPVGTTLEEAQAIFKRHRIEKLLVTDEAGFLRGLITIKDLTKRV 268


>gi|46579457|ref|YP_010265.1| inosine-5`-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602992|ref|YP_967392.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris DP4]
 gi|46448871|gb|AAS95524.1| inosine-5`-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120563221|gb|ABM28965.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris DP4]
 gi|311233273|gb|ADP86127.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris
           RCH1]
          Length = 485

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 71/168 (42%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  +         V+H    +    +    V  S   + +
Sbjct: 41  NIPLLSAAMDTVTESGMAISMARNGGIG-----VIHKNVPIHRQRLEVEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  +  A+ +++E R   + VV E  KL GI+T  D+   F KDL T  V +V
Sbjct: 96  DPVTIAPGLTVRQALEVMAEYRVSGLPVV-ENDKLVGILTNRDVR--FVKDLETTCVSEV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN   +   T L  A   L QH I  L+VVD   +  G++   D+
Sbjct: 153 MTSKNLVTVPVGTTLEEAKHHLHQHRIEKLLVVDGNNRLQGLITMKDI 200


>gi|418352|sp|P32987|YBP3_ACIAM RecName: Full=Uncharacterized 17.7 kDa protein in bps2 3'region;
           AltName: Full=ORF3
 gi|40783|emb|CAA45529.1| unnamed protein product [Acidianus ambivalens]
          Length = 164

 Score =  103 bits (256), Expect = 6e-20,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 53/121 (43%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +       +   + +VK    + +A   + E   G + V+D   ++ GIITE DI +   
Sbjct: 1   MATKVSQIATTKVYVVKPNVTIAEAAKEMKEHNLGSLVVIDSQNRVVGIITERDIVKAAS 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  VE  M K+ K + EDT +T A+ ++  +    L ++    K  GIV   DL R
Sbjct: 61  NRDIDSPVEKYMTKDVKGVTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLAR 120

Query: 338 F 338
            
Sbjct: 121 A 121



 Score = 42.6 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 3/59 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
           V     + DA+ I+    F  + ++    KL GI++  D+ R     H        E+V
Sbjct: 79  VTEDTEVTDALDIMLNNGFRHLPIIKSNGKLYGIVSIRDLARALLDVHTMQFGKPAEEV 137


>gi|163791205|ref|ZP_02185622.1| inositol-5-monophosphate dehydrogenase [Carnobacterium sp. AT7]
 gi|159873536|gb|EDP67623.1| inositol-5-monophosphate dehydrogenase [Carnobacterium sp. AT7]
          Length = 493

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLSVQLAKNIKLNVPIMSASMDTVTDSRMAIAMARQGGLG-----VIHKNMTIQQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + L          + +A  ++S  R   V +V+  E + L GI+T  D+ 
Sbjct: 87  VRKVKRSESGVILDPFFLTPSHSVSEAERLMSRYRISGVPIVNTMEERILVGILTNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D  ++ + +VM K N       T L  A  +L+QH I  L +VD   +  G++  
Sbjct: 147 --FVAD-YSIQINEVMTKENLVTAPSGTSLKEAEHILQQHKIEKLPIVDQDGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + + + +++     G  L +A  IL + +   + +VD+  +L G+IT  DI +   
Sbjct: 156 NEVMTKENLVTAPSGTSLKEAEHILQQHKIEKLPIVDQDGRLSGLITIKDIEKILE 211


>gi|170289451|ref|YP_001739689.1| CBS domain-containing protein [Thermotoga sp. RQ2]
 gi|170176954|gb|ACB10006.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
          Length = 215

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   +       +A+ ++ + +   + +V + +K+ GI+TE D+             
Sbjct: 7   MTRNPITIAPETSFSEALKLMKQNKIKRL-IVMKDEKIVGIVTEKDLLYASPSKATTLNI 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+ L +E++M K+   + E+T +  A +++ + +IS L VVDD    +GI+   
Sbjct: 66  WELHYLLSKLKIEEIMTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGHLVGIITQT 125

Query: 334 DLLR 337
           D+ +
Sbjct: 126 DIFK 129



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +NP  I  +T  + A++L++Q+ I  L+V+   +K +GIV   DLL
Sbjct: 3   VKDFMTRNPITIAPETSFSEALKLMKQNKIKRLIVM-KDEKIVGIVTEKDLL 53



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 16/91 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+ DA  I+ EK    + VVD+   L GIIT+ DIF+ F        V
Sbjct: 81  MTKDVVTVNENTPIEDAARIMEEKDISGLPVVDDAGHLVGIITQTDIFKVF--------V 132

Query: 286 EDVMIKNPKVIL--------EDTLLTVAMQL 308
           E    K    I            LL VA ++
Sbjct: 133 EIFGTKREGTIRYTMEMPDKPGELLEVAKRI 163


>gi|126652925|ref|ZP_01725067.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
 gi|126590255|gb|EAZ84377.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. B14905]
          Length = 487

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVQLTPKIKLNIPMISAGMDTVTESKMAIAMARQGGIG-----IIHKNMGIDEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VEKVKRSENGVITNPFFLTPTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +L +EDVM K +       T L  A ++L+Q+ I  L +VD+  +  G++  
Sbjct: 145 FISD---YSLKIEDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + + + + +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 154 EDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDIEKVIE 209


>gi|169825631|ref|YP_001695789.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
           C3-41]
 gi|168990119|gb|ACA37659.1| Inosine-5'-monophosphate dehydrogenase [Lysinibacillus sphaericus
           C3-41]
          Length = 487

 Score =  102 bits (255), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVQLTPKIKLNIPMISAGMDTVTESKMAIAMARQGGIG-----IIHKNMGIDEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VEKVKRSENGVITNPFFLTPTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +L +EDVM K +       T L  A ++L+Q+ I  L +VD+  +  G++  
Sbjct: 145 FISD---YSLKIEDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + + + + +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 154 EDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDIEKVIE 209


>gi|56478249|ref|YP_159838.1| putative nucleotidyltransferase [Aromatoleum aromaticum EbN1]
 gi|56314292|emb|CAI08937.1| putative nucleotidyltransferase [Aromatoleum aromaticum EbN1]
          Length = 632

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 48/216 (22%), Positives = 80/216 (37%), Gaps = 23/216 (10%)

Query: 140 PLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+ AI+S++ S    VA     +  LP E       ++P             +A  L +S
Sbjct: 93  PIGAISSQHPSTNSYVAVEDSFIYQLPAEDFLKLMQMSPVFHLFCT----QYIASLLNQS 148

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R   +  F             +              V  G  +  A+  +SE R GC+ +
Sbjct: 149 RQQLQTSFAQR----AAEQQTMTTPLGELVKKEAIFVTPGTSIRAALEKMSEMRLGCMVI 204

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD  Q+  GI+T+ D+  R     ++    V +VM ++P  +        A   +  H +
Sbjct: 205 VDAEQRPVGILTQSDLLSRIVLPAIDLQRPVSEVMTRDPHRMPASASAYDAALEMATHGV 264

Query: 315 SVLMVVDDCQKAIGIVHFLDL----------LRFGI 340
             L+V D   +  G+V   DL          +R GI
Sbjct: 265 RHLLVTDSDDRLKGVVSERDLFSLQRISLRQVRAGI 300


>gi|15612583|ref|NP_240886.1| inosine 5'-monophosphate dehydrogenase [Bacillus halodurans C-125]
 gi|34395726|sp|Q9KGN8|IMDH_BACHD RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|10172632|dbj|BAB03739.1| inositol-monophosphate dehydrogenase [Bacillus halodurans C-125]
          Length = 485

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAKMAIAIAREGGLG-----IIHKNMSVEEQAEQVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE QKL GI+T  D+   F +D +TL ++DV
Sbjct: 98  NPFFLTPDRQVFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDLR--FIEDYSTL-IDDV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 155 MTKENLVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202


>gi|114562724|ref|YP_750237.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334017|gb|ABI71399.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
          Length = 615

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                 ++     ++DA  ++ E R   V V+D  QKL GI+T+ D+  R   + L+   
Sbjct: 156 MSSQPIIIDAHASVMDAAKLMREHRVSSVLVID-NQKLTGILTDRDLRNRIIAEGLDVNT 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V   M  NP     + L+  AM  + +HNI  L VVD   +A+G++   D+LR
Sbjct: 215 LVSQAMTINPVTTHANALVFEAMLAMSEHNIHHLPVVDGS-RALGMITSTDILR 267


>gi|299542092|ref|ZP_07052408.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
           ZC1]
 gi|298725407|gb|EFI66055.1| inosine-5'-monophosphate dehydrogenase [Lysinibacillus fusiformis
           ZC1]
          Length = 487

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVQLTPKIKLNIPMVSAGMDTVTESKMAIAMARQGGIG-----IIHKNMGIDEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VEKVKRSENGVITNPFFLTPTHQVFDAEHLMGKYRISGVPIVDSMENQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +L +EDVM K +       T L  A ++L+Q+ I  L +VD+  +  G++  
Sbjct: 145 FISD---YSLKIEDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + + + + +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 154 EDVMTKEDLITAPVGTTLEDAEKILQQYKIEKLPIVDEEGRLTGLITIKDIEKVIE 209


>gi|229489546|ref|ZP_04383409.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           SK121]
 gi|229323643|gb|EEN89401.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           SK121]
          Length = 507

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + ++ +T ++  ++   +D++   +    +         P  S+ M       +AIA+
Sbjct: 16  NKVAMLGLTYDDVLLLPAASDVIPSQVDTSSQLTRDIRLRIPLVSSAMDTVTESRMAIAM 75

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
             +         VLH    +         V  S           K    + +     +  
Sbjct: 76  ARAGG-----MGVLHRNSSVEVQAGQVETVKRSEAGMVTDPVTCKPTDTMGEVDAKCARF 130

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   + V D+  +L GI+T  D+     ++     V ++M K P     E     VA+ L
Sbjct: 131 RISGLPVTDDAGQLVGIVTNRDMRFEVDQN---RPVAEIMTKMPLITAQEGVTADVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGNGKLTGLITVKDFVK 216


>gi|254821003|ref|ZP_05226004.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium
           intracellulare ATCC 13950]
          Length = 531

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 75/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            I ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 39  KIAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 98

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 99  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 156

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVDE   L GIIT  D+     +   T  V +VM K P     E      A+ LLR+H
Sbjct: 157 LPVVDESGALVGIITNRDMRFEVDQ---TKKVAEVMTKAPLITAQEGVSADAALGLLRRH 213

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   +  G++   D ++
Sbjct: 214 KIEKLPIVDGHGRLTGLITVKDFVK 238


>gi|206901405|ref|YP_002250467.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
           H-6-12]
 gi|206740508|gb|ACI19566.1| inosine-5'-monophosphate dehydrogenase [Dictyoglomus thermophilum
           H-6-12]
          Length = 493

 Score =  102 bits (255), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 13/176 (7%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
               H   P  SA M       +AIA+            ++H    +         V  S
Sbjct: 38  TERIHLNIPILSAAMDTVTEARMAIAIAREGGLG-----IIHRNMSIERQAEEVDKVKRS 92

Query: 227 GD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
                     +     + +A++I+++     + VV++  KL GI+T  D+   F  ++N 
Sbjct: 93  EHGMITDPIFLHPEQTVGEALSIMAKYHISGLPVVEKDGKLVGIVTNRDLR--FETNMNK 150

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V ++M K N  V      +  A ++L+++ I  L +VD   K  G++   D+ +
Sbjct: 151 -KVSEIMTKDNLIVAQVGITIKDAQEILQKYKIEKLPIVDKDFKLRGLITIKDIQK 205



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 15/122 (12%)

Query: 221 SDVMHSGDSIPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +V         + +  P L  A+  ++E R   +A+  EG    GII      RN   +
Sbjct: 29  KEVCVDTYLTERIHLNIPILSAAMDTVTEARM-AIAIAREGG--LGII-----HRNMSIE 80

Query: 280 LNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                V+ V      MI +P  +  +  +  A+ ++ +++IS L VV+   K +GIV   
Sbjct: 81  RQAEEVDKVKRSEHGMITDPIFLHPEQTVGEALSIMAKYHISGLPVVEKDGKLVGIVTNR 140

Query: 334 DL 335
           DL
Sbjct: 141 DL 142


>gi|310657610|ref|YP_003935331.1| imp dehydrogenase [Clostridium sticklandii DSM 519]
 gi|308824388|emb|CBH20426.1| IMP dehydrogenase [Clostridium sticklandii]
          Length = 487

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V  S   + +
Sbjct: 41  NIPIVSAGMDTVTEHGMAIAVAREGGIG-----IIHKNMTIAEQALEVDKVKRSEHGVIV 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A +++   R   V +VDE  KL GI+T  DI   F  D  T  +E+ 
Sbjct: 96  DPFFLTKDKTLGEADSLMGRYRISGVPIVDEQDKLIGILTNRDIR--FETDF-TKKIEEA 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N    LE   L  A  +L +H I  L +VD      G++   D+
Sbjct: 153 MTSENLITALEGVSLEEAQHILAKHKIEKLPIVDKDGYLKGLITIKDI 200


>gi|282899529|ref|ZP_06307493.1| Predicted signal transduction protein containing CBS domain
           proteins [Cylindrospermopsis raciborskii CS-505]
 gi|281195408|gb|EFA70341.1| Predicted signal transduction protein containing CBS domain
           proteins [Cylindrospermopsis raciborskii CS-505]
          Length = 152

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 41/139 (29%), Positives = 62/139 (44%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  +V    PL  AI IL+EK+   + VVD+  KL GII+E D+             
Sbjct: 9   MTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLMWQETGITPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + +DL+     +V +VM  NP  I  D  L  A ++++ H +  L 
Sbjct: 69  MFLDSVIYLQNPATYERDLHKALGQTVGEVMSNNPITISPDQSLKTAAKIIQDHKVRRLP 128

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVDD    IGI+   D++R
Sbjct: 129 VVDDAGTVIGILTRGDIIR 147



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 32/55 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +V  VM  NP ++   T L  A+Q+L +  +S L VVDD  K +GI+   DL+
Sbjct: 2   SKTVAQVMTHNPIMVNPQTPLKQAIQILAEKQVSGLPVVDDMGKLVGIISETDLM 56



 Score = 42.6 bits (99), Expect = 0.083,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             ++   +     L  A  I+ + +   + VVD+   + GI+T GDI R    D
Sbjct: 99  MSNNPITISPDQSLKTAAKIIQDHKVRRLPVVDDAGTVIGILTRGDIIRTMAWD 152


>gi|256380521|ref|YP_003104181.1| inosine-5'-monophosphate dehydrogenase [Actinosynnema mirum DSM
           43827]
 gi|255924824|gb|ACU40335.1| inosine-5'-monophosphate dehydrogenase [Actinosynnema mirum DSM
           43827]
          Length = 503

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 51/204 (25%), Positives = 68/204 (33%), Gaps = 26/204 (12%)

Query: 152 VACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRN 198
           +    D VL LP + E  P G               P  SA M       +AIA+     
Sbjct: 17  LGLTFDDVLLLPAQSEIVPSGVDTSTRLSRNIVLRVPLASAAMDTVTEGRMAIAMARQGG 76

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCV 254
                  VLH    +         V  S             G  +     + +  R   V
Sbjct: 77  IG-----VLHRNLSVEEQARQVETVKRSEAGMVSDPVTCSPGDTIKHVDDLCARYRISGV 131

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHN 313
            V DE  KL GIIT  DI         +  V +VM K P            A+ LLR+H 
Sbjct: 132 PVTDEAGKLVGIITNRDIRFEVD---YSRKVAEVMTKGPLITAQVGVSAEAALGLLRRHK 188

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VD   K  G++   D ++
Sbjct: 189 IEKLPIVDGDNKLRGLITVKDFVK 212


>gi|212634794|ref|YP_002311319.1| cyclic nucleotide-binding protein [Shewanella piezotolerans WP3]
 gi|212556278|gb|ACJ28732.1| Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase
           DUF294 [Shewanella piezotolerans WP3]
          Length = 615

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 7/144 (4%)

Query: 199 FSENDFYVL--HPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVA 255
           F    F     H G          S +       PL + +   + DA  ++ + R   V 
Sbjct: 126 FFNKAFAKRLRHQGRFKAKELATTSRITTLMSKSPLTIDMKATISDAARLMRKSRVSSVL 185

Query: 256 VVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+D  +KL GI+T+ D+  R   + L+ +L+V   M   P  I  ++L+  AM L+ +HN
Sbjct: 186 VID-NEKLVGILTDKDLRNRVLAEGLDGSLAVHQAMTTTPISIESNSLVFEAMLLMSEHN 244

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L VVD C  A GI+   D+LR
Sbjct: 245 IHHLPVVD-CGLAKGIITSTDILR 267


>gi|169335397|ref|ZP_02862590.1| hypothetical protein ANASTE_01809 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258135|gb|EDS72101.1| hypothetical protein ANASTE_01809 [Anaerofustis stercorihominis DSM
           17244]
          Length = 487

 Score =  102 bits (254), Expect = 8e-20,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   + +
Sbjct: 41  NIPLMSAGMDTVTESKLAIAMSRQGGIG-----IIHKNMTIEQQAAEVDKVKRSEHGVIV 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I++  +   V + D+   L GIIT  D+   F +D     ++D 
Sbjct: 96  DPFFLSPEHVVEDANEIMARYKISGVPITDKTGTLVGIITNRDLR--FERD-PKKKIKDA 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     E T L  A ++L+++ I  L +VD   K  G++   D+
Sbjct: 153 MTKDNLITAAEGTTLEEAEKILKKNRIEKLPIVDKNFKLKGLITIKDI 200


>gi|311070656|ref|YP_003975579.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
 gi|310871173|gb|ADP34648.1| inosine 5'-monophosphate dehydrogenase [Bacillus atrophaeus 1942]
          Length = 488

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M      A+AIA+            ++H    +      
Sbjct: 30  VDLSVELTKTLKLNIPVISAGMDTVTESAMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPDHQVFDAEHLMGKYRISGVPIVDNNEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM +   V     T L  A ++L++H I  L +VDD  K  G++  
Sbjct: 145 FISD---YSMKISDVMTREELVTAPVGTTLDQAEKILQKHKIEKLPLVDDQNKLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|253577332|ref|ZP_04854649.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. oral
           taxon 786 str. D14]
 gi|251843232|gb|EES71263.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. oral
           taxon 786 str. D14]
          Length = 486

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 69/184 (37%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +            P  SA M      ALAIA+            ++H    +      
Sbjct: 30  VDVSTRLSDKVKLNIPLISAGMDTVTEAALAIAIAREGGIG-----IIHKNMPVEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   +            + DA  ++++ R   V +V+E QKL GI+T  D+   
Sbjct: 85  VDRVKRSESGVITNPFSLTPDHLVSDAEQVMAKFRISGVPIVNEEQKLVGILTNRDLRFV 144

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              ++    + DVM + N       T L  A  +L++H I  L +VD+     G++   D
Sbjct: 145 HDYNI---KISDVMTRDNLITAPVGTSLHEAEIILQKHKIEKLPLVDEQNILKGLITIKD 201

Query: 335 LLRF 338
           + + 
Sbjct: 202 IEKA 205


>gi|86133263|ref|ZP_01051845.1| inosine-5'-monophosphate dehydrogenase [Polaribacter sp. MED152]
 gi|85820126|gb|EAQ41273.1| inosine-5'-monophosphate dehydrogenase [Polaribacter sp. MED152]
          Length = 491

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      +LAIA+            VLH              V  +   + L
Sbjct: 45  NVPIVSAAMDTVTESSLAIAIAREGGIG-----VLHKNMTTEQQAQEVRKVKRAESGMIL 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                 +   ++DA   + E   G + +VD+   LKGI+T  D+     +  N   + +V
Sbjct: 100 DPVTLQMDATVLDAKLSMKEHSIGGIPIVDKEGTLKGIVTNRDLRF---EHKNKRPIVEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N       T L  A ++L+ + I  L++VD   K  G++ F D+ +
Sbjct: 157 MTSENLVTADVGTSLKDAEKILQNYKIEKLLIVDADYKLKGLITFRDITK 206


>gi|303247272|ref|ZP_07333546.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio
           fructosovorans JJ]
 gi|302491431|gb|EFL51319.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio
           fructosovorans JJ]
          Length = 485

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 46/168 (27%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI+L            V+H    +    +    V  S   + +
Sbjct: 41  NIPLVSAAMDTVTESRMAISLARCGGVG-----VVHKNMTIAEQKLEVEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+ ++SE     + VVD G +L GI+T  D+   F KD +   V DV
Sbjct: 96  SPITVPPDMTVEQALVVMSEYSISGLPVVD-GDRLVGIVTNRDVR--FVKD-SVTKVGDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N K +   T L  A   L  + I  L+VVD   K  G++   D+
Sbjct: 152 MTKENLKTVPVGTTLEEAKAHLHANRIEKLLVVDSNNKLRGLITIKDI 199


>gi|303243556|ref|ZP_07329898.1| inosine-5'-monophosphate dehydrogenase [Methanothermococcus
           okinawensis IH1]
 gi|302486117|gb|EFL49039.1| inosine-5'-monophosphate dehydrogenase [Methanothermococcus
           okinawensis IH1]
          Length = 492

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 45/169 (26%), Positives = 68/169 (40%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            V+H    +         V  + D I  
Sbjct: 44  NIPIISAAMDTVSEKEMAIALARKGGIG-----VIHRNMTIEEQVNQVMAVKKAEDIIVR 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  I+ E     + VVD+  +L GIIT  D+    +KD     V+D 
Sbjct: 99  DVITISPDYNIGDAERIMEEYGISGLPVVDKNDELLGIITTRDVKYISNKD---TLVKDA 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KN     ED     AM ++ ++ I  L ++D   K IG++   D+L+
Sbjct: 156 MTKNVVYGKEDINHEDAMNIMYENRIERLPILDKNNKLIGMITLRDILK 204



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 13/35 (37%), Positives = 21/35 (60%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           DA+ I+ E R   + ++D+  KL G+IT  DI + 
Sbjct: 171 DAMNIMYENRIERLPILDKNNKLIGMITLRDILKR 205


>gi|108798138|ref|YP_638335.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium sp. MCS]
 gi|126433797|ref|YP_001069488.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium sp. JLS]
 gi|108768557|gb|ABG07279.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. MCS]
 gi|126233597|gb|ABN96997.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. JLS]
          Length = 517

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D++        +         P  S+ M       +AIA+ 
Sbjct: 23  KVAMLGLTFDDVLLLPAASDVIPATADTSSQLTKRIRLRVPLVSSAMDTVTESRMAIAMA 82

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G +                      L +   + +  R   
Sbjct: 83  RAGGMG--VLHRNLPVAEQAGQVETVKRSEAGMVTDPVTCSPDNTLAEVDAMCARFRISG 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVDE   L GIIT  D+     +   +  V +VM K P     E      A+ LLR+H
Sbjct: 141 LPVVDERGSLVGIITNRDMRFEVDQ---SKPVSEVMTKAPLITAQEGVSAEAALGLLRRH 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   K  G++   D ++
Sbjct: 198 KIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|332654329|ref|ZP_08420073.1| inosine-5'-monophosphate dehydrogenase [Ruminococcaceae bacterium
           D16]
 gi|332517415|gb|EGJ47020.1| inosine-5'-monophosphate dehydrogenase [Ruminococcaceae bacterium
           D16]
          Length = 491

 Score =  102 bits (254), Expect = 9e-20,   Method: Composition-based stats.
 Identities = 44/186 (23%), Positives = 74/186 (39%), Gaps = 14/186 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 34  VDLHTQLTKKIRLNIPLISAAMDTVTEYRMAIAIAREGGIG-----IIHKNMSISQQAEQ 88

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +         G  L +A  ++++ R   V + D   KL GIIT  D+   
Sbjct: 89  VDMVKRSENGVITNPFWLAPGHTLAEADELMAKYRISGVPICD-NGKLIGIITNRDMK-- 145

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D++ L +++VM K N     E T L  A ++LR+H I  L +VD      G++   D
Sbjct: 146 FETDMSQL-IDNVMTKENLVTAPEGTTLAEAKEILRKHKIEKLPIVDKDFHLKGLITIKD 204

Query: 335 LLRFGI 340
           + +  +
Sbjct: 205 IEKAEV 210


>gi|154501514|ref|ZP_02039215.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
           29799]
 gi|150269802|gb|EDM97342.1| hypothetical protein BACCAP_04867 [Bacteroides capillosus ATCC
           29799]
          Length = 491

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 14/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            ++H    +G     
Sbjct: 34  IDLHTNLTKKIQLNIPLMSAAMDTVTEYRMAIAIAREGGIG-----IIHKNMSIGAQAEQ 88

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +         G  L +A  ++++ R   V + D   KL GIIT  D+   
Sbjct: 89  VDMVKRSENGVITNPFWLAPGHTLAEADELMAKYRISGVPICD-NGKLIGIITNRDMK-- 145

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D++ L +++VM K +     E   L  A ++LR+H I  L +VDD  +  G++   D
Sbjct: 146 FETDMSQL-IDNVMTKDHLVTAKEGITLEEAKEILRKHKIEKLPLVDDDFRLKGLITIKD 204

Query: 335 LLRF 338
           + + 
Sbjct: 205 IEKA 208


>gi|325479353|gb|EGC82449.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 483

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPMMSAGMDTVTESQMAIAMARQGGIG-----IIHKNMPIAEQARQVDVVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA+ I++  R   V +VD+   LKGI+T  D+   F +D  TL ++ +
Sbjct: 95  DPFYLHPDNILQDALDIMANYRISGVPIVDKEMYLKGILTNRDVR--FEED-PTLQIDSI 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N  V  E   +  A++L+ +  I  L +VDD  K  G++   D+ +  
Sbjct: 152 MTKENLVVGYEGIKMKEAIKLMEEAKIEKLPIVDDDYKLKGLITIKDIEKSK 203


>gi|312142722|ref|YP_003994168.1| inosine-5'-monophosphate dehydrogenase [Halanaerobium sp.
           'sapolanicus']
 gi|311903373|gb|ADQ13814.1| inosine-5'-monophosphate dehydrogenase [Halanaerobium sp.
           'sapolanicus']
          Length = 488

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 13/185 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           +    +     +   P  SA M       +AIA+            V+H    +      
Sbjct: 28  IDTRTKLTDDIYLNTPIISAGMDTVTEADMAIAMAREGGLG-----VIHKNMSIRRQASE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   + +          + +A  ++S+     V +VD+   L GI+T  D+   
Sbjct: 83  VDRVKRSESGVIIDPFFLSPDALISEAEELMSKYHISGVPIVDKDNILVGILTNRDLR-- 140

Query: 276 FHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D +   V +VM  +        T L  A   LR+H I  L +VD+  K  G++   D
Sbjct: 141 FVEDYDR-PVSEVMTDEELVTAPVGTDLEGAKAKLREHKIEKLPIVDEDGKLSGLITIKD 199

Query: 335 LLRFG 339
           + +  
Sbjct: 200 IEKAK 204


>gi|303327984|ref|ZP_07358423.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
 gi|302861810|gb|EFL84745.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. 3_1_syn3]
          Length = 485

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++            ++H    +    +    V  S   + L
Sbjct: 41  RIPLLSAAMDTVTESAMAISMARMGGIG-----IIHKNMPVDRQRLEVERVKKSESGMIL 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++S+ R   + VVD G++L GI+T  D+   F +D   + V DV
Sbjct: 96  DPVTISPRNSVQEALDLMSDFRVSGLPVVD-GERLVGILTNRDVR--FVEDAQAVRVADV 152

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +    +   T L  A + L +H I  L+VVD+ ++  G++   D+
Sbjct: 153 MTSDKLITVPMGTSLAEAKRHLHEHRIEKLLVVDENKRLRGLITMKDI 200


>gi|284165226|ref|YP_003403505.1| inosine-5'-monophosphate dehydrogenase [Haloterrigena turkmenica
           DSM 5511]
 gi|284014881|gb|ADB60832.1| inosine-5'-monophosphate dehydrogenase [Haloterrigena turkmenica
           DSM 5511]
          Length = 500

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 61/183 (33%), Gaps = 12/183 (6%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L            P  SA M       +AIA+            VLH    +  +    
Sbjct: 41  DLTSRVSKNVEVSVPILSAAMDTVTESGMAIAMARHGGLG-----VLHRNMNIDEMVEEI 95

Query: 221 SDVM------HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             V          D +        + +    ++ +  G   VV+   ++ GII+  DI  
Sbjct: 96  ERVKSADELIIPLDEVVTADPEMTVREVDERMARQGVGGAPVVNTNGEVLGIISSTDIRP 155

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +   + +   V + M        ED     A  L+ +H I  + VVDD    +G+V    
Sbjct: 156 HLEVNEDD-PVTEAMTDEVITAHEDIDARDAFDLMYEHKIERVPVVDDENLLVGLVTMQG 214

Query: 335 LLR 337
           +L+
Sbjct: 215 ILQ 217


>gi|313679341|ref|YP_004057080.1| inosine-5'-monophosphate dehydrogenase [Oceanithermus profundus DSM
           14977]
 gi|313152056|gb|ADR35907.1| inosine-5'-monophosphate dehydrogenase [Oceanithermus profundus DSM
           14977]
          Length = 489

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            V+H      T       V  S      
Sbjct: 45  NLPLLSAAMDTVTEAKMAIAMAREGGIG-----VIHKNLDPRTQADHVRRVKRSEAGMIT 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ E + G + VVD   +L G++T  DI   F  DL+   V +V
Sbjct: 100 DPITLPPNATLEDADRLMGEYKIGGLPVVDFHGQLLGLVTNRDIR--FETDLSK-PVSEV 156

Query: 289 MIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M    ++I       L  A  +LR+H I  L +VDD  K  G++   DL++
Sbjct: 157 MTPRERLITGPPGMTLDEAEAVLRKHKIEKLPLVDDSGKLRGLLTLKDLVK 207


>gi|308370257|ref|ZP_07420816.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308371339|ref|ZP_07424621.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308372537|ref|ZP_07428992.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308376113|ref|ZP_07446087.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308378314|ref|ZP_07482187.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308379505|ref|ZP_07486531.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308380690|ref|ZP_07490752.2| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu011]
 gi|308324872|gb|EFP13723.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu002]
 gi|308329053|gb|EFP17904.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu003]
 gi|308332914|gb|EFP21765.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu004]
 gi|308344260|gb|EFP33111.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu007]
 gi|308352934|gb|EFP41785.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu009]
 gi|308356798|gb|EFP45649.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu010]
 gi|308360746|gb|EFP49597.1| inosine-5-monophosphate dehydrogenase guaB2 [Mycobacterium
           tuberculosis SUMu011]
          Length = 488

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIP 231
             P  S+ M       +AIA+  +        +   P   + G + +             
Sbjct: 36  KVPLVSSAMDTVTESRMAIAMARAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPV 93

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
             +    L     + +  R   + VVD+   L GIIT  D+     +   +  V +VM K
Sbjct: 94  TCRPDNTLAQVDALCARFRISGLPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTK 150

Query: 292 NP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P     E    + A+ LLR++ I  L VVD   +  G++   D ++
Sbjct: 151 APLITAQEGVSASAALGLLRRNKIEKLPVVDGRGRLTGLITVKDFVK 197


>gi|119867234|ref|YP_937186.1| inositol-5-monophosphate dehydrogenase [Mycobacterium sp. KMS]
 gi|119693323|gb|ABL90396.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. KMS]
          Length = 517

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 74/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D++        +         P  S+ M       +AIA+ 
Sbjct: 23  KVAMLGLTFDDVLLLPAASDVIPATADTSSQLTKRIRLRVPLVSSAMDTVTESRMAIAMA 82

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G +                      L +   + +  R   
Sbjct: 83  RAGGMG--VLHRNLPVAEQAGQVETVKRSEAGMVTDPVTCSPDNTLAEVDAMCARFRISG 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVDE   L GIIT  D+     +   +  V +VM K P     E      A+ LLR+H
Sbjct: 141 LPVVDERGSLVGIITNRDMRFEVDQ---SKPVSEVMTKAPLITAQEGVSAEAALGLLRRH 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   K  G++   D ++
Sbjct: 198 KIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|221633416|ref|YP_002522641.1| inosine-5'-monophosphate dehydrogenase [Thermomicrobium roseum DSM
           5159]
 gi|221156024|gb|ACM05151.1| inosine-5'-monophosphate dehydrogenase [Thermomicrobium roseum DSM
           5159]
          Length = 511

 Score =  102 bits (254), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            ++H    +         V  S   + +
Sbjct: 63  NIPIVSAAMDTVTEARMAIALAREGGIG-----IIHRNLSIEEQVAEVDKVKRSESGMIV 117

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + DA+ ++       V + DE  +L GI+T  D+   F  DL+   V ++
Sbjct: 118 EPVTLRPTDKVRDALAVMERYHISGVPITDENGRLVGILTNRDLR--FEDDLDQ-PVANL 174

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N       T L  A ++L ++ I  L VVD+     G++   D+ +
Sbjct: 175 MTKENLITAPVGTTLDEAREILHKYKIEKLPVVDERGILKGLITVKDIQK 224


>gi|118431896|ref|NP_148644.2| hypothetical protein APE_2489.1 [Aeropyrum pernix K1]
 gi|116063219|dbj|BAA81505.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 148

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 2/124 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           +  VK   P+  A  ++ E   G V VVD+  +L+GI+TE DI  
Sbjct: 8   RRKIPVRASDIMITEVVTVKPDDPVTRAAKLMVENLIGSVLVVDDEGRLRGIVTERDIVY 67

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +  D     V ++M +NP V+  D  L   ++ + + N+  L VVD+    +GI+ F
Sbjct: 68  VVSEAWDPTKHRVWEIMTENPIVVRPDDDLLTVVRKMSETNVRHLPVVDEKGAPVGIISF 127

Query: 333 LDLL 336
            D+L
Sbjct: 128 RDVL 131


>gi|226309601|ref|YP_002769495.1| inosine-5'-monophosphate dehydrogenase [Brevibacillus brevis NBRC
           100599]
 gi|226092549|dbj|BAH40991.1| inosine-5'-monophosphate dehydrogenase [Brevibacillus brevis NBRC
           100599]
          Length = 486

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 70/184 (38%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       LAIA+            ++H    +      
Sbjct: 30  VDLRVQLSENVKLNIPLISAGMDTVTESGLAIAMARQGGIG-----IVHKNMTIEQQASE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   +            + +A  ++ + R   V +VD  QKL GI+T  D+   
Sbjct: 85  VDRVKRSESGVITNPFSLTQEHTVEEANALMGKYRISGVPIVDANQKLIGILTNRDLR-- 142

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D  ++ +++VM K N       T L  A  +L+QH I  L +VD+     G++   D
Sbjct: 143 FVHDF-SIKIKEVMTKENLVTAPVGTTLQQAELILQQHKIEKLPLVDENNTLRGLITIKD 201

Query: 335 LLRF 338
           + + 
Sbjct: 202 IEKA 205


>gi|313676463|ref|YP_004054459.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
           4126]
 gi|312943161|gb|ADR22351.1| inosine-5'-monophosphate dehydrogenase [Marivirga tractuosa DSM
           4126]
          Length = 490

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGD--ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        A+AIAL     F   +  +     ++  +    S ++    ++
Sbjct: 45  NIPLVSSAMDTVTEHHLAIAIALEGGLGFIHKNMTIEQQAMEVRKVKRSQSGMILDPITL 104

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            +      + DA+ I+ E + G + VVD  +KL GI+T  D+   F KD   +SVE VM 
Sbjct: 105 HI---ESTVGDALKIMRENKIGGIPVVDSNKKLVGIVTNRDLR--FQKD-GKVSVEKVMT 158

Query: 291 KN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                   E   L  A  +L++H I  L +++     +G++ + D+L+  
Sbjct: 159 SGKLITAEEGINLEGAEGVLQEHKIEKLPIINKSGILMGLITYKDILKKK 208


>gi|220905068|ref|YP_002480380.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869367|gb|ACL49702.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 485

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++            ++H    +    +    V  S   + L
Sbjct: 41  RIPLLSAAMDTVTESAMAISMARMGGIG-----IIHKNMPVSRQRLEVERVKKSESGMIL 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++S+ R   + VV +  +L GI+T  D+   F +D   + V DV
Sbjct: 96  DPVTISPNNTVQEALDLMSDFRVSGLPVVADD-RLVGILTNRDVR--FVEDGQAVHVADV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N   +   T L  A Q L +H I  L+VVD+     G++   D+
Sbjct: 153 MTSENLVTVPMGTSLAEAKQHLHEHRIEKLLVVDEEGHLRGLITMKDI 200


>gi|288931499|ref|YP_003435559.1| Cl- channel voltage-gated family protein [Ferroglobus placidus DSM
           10642]
 gi|288893747|gb|ADC65284.1| Cl- channel voltage-gated family protein [Ferroglobus placidus DSM
           10642]
          Length = 583

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 2/123 (1%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +   + M   D +  +     + D +  ++        VV E  KL GIIT  D+ R 
Sbjct: 454 ENIKVKEAMTPADKVMTLSPKNTISDVLLAINSTGHLGYPVV-ENGKLVGIITLEDVLRV 512

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  +++ VE+VM K    I  +  L  A++LL ++ I  L VV+D  K +G++   D+
Sbjct: 513 PEEKRDSVKVEEVMTKEVITISPEASLEDALRLLEKYKIGRLPVVEDS-KLVGLITRSDI 571

Query: 336 LRF 338
           +R 
Sbjct: 572 IRA 574



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                           +  +     L DA+ +L + + G + VV E  KL G+IT  DI 
Sbjct: 514 EEKRDSVKVEEVMTKEVITISPEASLEDALRLLEKYKIGRLPVV-EDSKLVGLITRSDII 572

Query: 274 RNFHKDLNTLS 284
           R   K ++++S
Sbjct: 573 RAHAKAISSIS 583



 Score = 39.1 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%), Gaps = 10/69 (14%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIG 328
           D+  N          + VM  +PK  + D LL +       ++   L   VV +  K +G
Sbjct: 451 DVLENIKVKEAMTPADKVMTLSPKNTISDVLLAI-------NSTGHLGYPVV-ENGKLVG 502

Query: 329 IVHFLDLLR 337
           I+   D+LR
Sbjct: 503 IITLEDVLR 511


>gi|332796755|ref|YP_004458255.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332694490|gb|AEE93957.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 131

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V+    L +   I+++   G V VVD   K  GIITE D+ R      +     E++M  
Sbjct: 16  VEKSLTLKEVAEIMTKNNVGSVIVVD-HGKPIGIITEKDVVRGLGNGKDLNTKAEEIMTA 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I ED  +T A+ L+R +NI  L VV++  K  GI+   D+ R 
Sbjct: 75  SLITIREDAPITGALSLMRTNNIRHLPVVNEDGKLTGILSIRDVARA 121



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V++ M  N   + +   L    +++ ++N+  ++VVD   K IGI+   D++R
Sbjct: 5   VKEYMKSNVISVEKSLTLKEVAEIMTKNNVGSVIVVDH-GKPIGIITEKDVVR 56



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           ++   P+  A++++       + VV+E  KL GI++  D+ R   
Sbjct: 79  IREDAPITGALSLMRTNNIRHLPVVNEDGKLTGILSIRDVARALD 123


>gi|289191829|ref|YP_003457770.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938279|gb|ADC69034.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 418

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 2/118 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
            +V         +    P +DA+  + +       +V+   K+ GIIT+ DI     K +
Sbjct: 66  EEVRSLMYKAHCIHEDTPFLDAVCEMLDSGQRAAPIVNSVGKMVGIITDYDIMARASKSI 125

Query: 281 --NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 V  +M +N   I E+  +  A  L+R +NI  L+VVDD    +G+V  +D+L
Sbjct: 126 IMKDTKVTKIMTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDIL 183



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 53/128 (41%), Gaps = 16/128 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  +     +  A  ++ +   G + VVD+     G++TE DI +   K    ++V
Sbjct: 136 MTRNVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDILKKVFKPKKKMTV 195

Query: 286 ED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +               +M      +  D     A +++++++I  + VV   +   GIV
Sbjct: 196 GEFKGEKVPRMGQPVRLIMNTPLITVDVDASAADAARVMQEYDIRGVPVV-KGKSLRGIV 254

Query: 331 HFLDLLRF 338
             LD++++
Sbjct: 255 TRLDIIKY 262



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG-----IVHFLDLL 336
            V+++M K+   +  DT ++ A+ ++ ++    L+VV+      G     ++   DLL
Sbjct: 5   PVKEIMTKDVVTVTPDTPVSKALGIMEENGFHHLIVVEKKD---GKEEYYLISMRDLL 59



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTL 283
               +  V    P+  A+ I+ E  F  + VV+  +G++   +I+  D+           
Sbjct: 10  MTKDVVTVTPDTPVSKALGIMEENGFHHLIVVEKKDGKEEYYLISMRDL---LLASSTHE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M K    I EDT    A+  +         +V+   K +GI+   D++
Sbjct: 67  EVRSLMYKA-HCIHEDTPFLDAVCEMLDSGQRAAPIVNSVGKMVGIITDYDIM 118


>gi|296168784|ref|ZP_06850470.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
 gi|295896545|gb|EFG76190.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium
           parascrofulaceum ATCC BAA-614]
          Length = 536

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 42  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 101

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 102 RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 159

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   T  V +VM K P     E      A+ LLR++
Sbjct: 160 LPVVDDAGALVGIITNRDMRFEVDQ---TRKVAEVMTKAPLITAQEGVSADAALGLLRRN 216

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 217 KIEKLPVVDGHGRLTGLITVKDFVK 241


>gi|289523011|ref|ZP_06439865.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289503554|gb|EFD24718.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 492

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 63/172 (36%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H              V  S   + +
Sbjct: 46  NIPICSAAMDTVTDGRLAIAIAREGGIG-----VIHRNMTPDAQAEEVDKVKRSESGVIV 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA+ ++       V +VD   KL GIIT  D+      D     ++DV
Sbjct: 101 DPFYLHPEDTLRDAVALMEHYHISGVPIVDADMKLVGIITNRDLRFITDYD---QPIKDV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N  V    T L  A  +L +H +  L +VD   +  G++   D+++  
Sbjct: 158 MTKENLIVSHIGTTLEDAKAILMKHKVEKLPIVDSEGRLKGLITIKDIIKAK 209



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 58/144 (40%), Gaps = 18/144 (12%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F+ +D  +     K+    VC      S   + +         A+  +++ R   +A+ 
Sbjct: 13  GFTFDDVLLEPSYSKVMPSLVCVKSFFTSQIGLNIPICSA----AMDTVTDGRL-AIAIA 67

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQ 311
            EG    G+I      RN   D     V+ V      +I +P  +  +  L  A+ L+  
Sbjct: 68  REGG--IGVI-----HRNMTPDAQAEEVDKVKRSESGVIVDPFYLHPEDTLRDAVALMEH 120

Query: 312 HNISVLMVVDDCQKAIGIVHFLDL 335
           ++IS + +VD   K +GI+   DL
Sbjct: 121 YHISGVPIVDADMKLVGIITNRDL 144


>gi|301058318|ref|ZP_07199351.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300447554|gb|EFK11286.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 225

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 13/115 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL----------- 283
               + DA+  + EK    + V+ +  KL G++T+ D+ R    D  TL           
Sbjct: 16  ANDSMQDAMQRMKEKGISMLPVI-KKGKLVGVVTDRDLKRASASDATTLEVHELLFLITK 74

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V+D+M +NP  I  D  +  A ++L + NIS   V+D+  K IGI+   DL R
Sbjct: 75  IKVQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFR 129



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M K       +  +  AMQ +++  IS+L V+    K +G+V   DL R 
Sbjct: 3   VKDWMSKGVITADANDSMQDAMQRMKEKGISMLPVI-KKGKLVGVVTDRDLKRA 55



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                     +   +     + +A  +L EK      V+DE  K+ GIIT+ D+FR  
Sbjct: 74  KIKVQDIMTRNPITIPFDFTVEEAAEVLLEKNISGAPVMDEKGKVIGIITKNDLFRVL 131


>gi|300775846|ref|ZP_07085706.1| IMP dehydrogenase [Chryseobacterium gleum ATCC 35910]
 gi|300505396|gb|EFK36534.1| IMP dehydrogenase [Chryseobacterium gleum ATCC 35910]
          Length = 486

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    + ++      
Sbjct: 44  NVPIVSAAMDTVTEADLAIALARVGGLGFIHKNMTIAEQAAQVNRVKRSENGMI---SDP 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +A  ++S  +   + VVD    L GIIT  D+    +++   + VE++M 
Sbjct: 101 VTLSKDHTLGEAKDLMSRYKISGLPVVDADNVLIGIITNRDVK---YQENLDMKVEEIMT 157

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N     +DT L  A ++L ++ +  L +VD   K +G++   D+
Sbjct: 158 KENLITSDKDTNLEKAKEILLKNRVEKLPIVDKDNKLVGLITIKDI 203


>gi|84515211|ref|ZP_01002573.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
 gi|84510494|gb|EAQ06949.1| arabinose 5-phosphate isomerase [Loktanella vestfoldensis SKA53]
          Length = 78

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 3/79 (3%)

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--D 322
           GI+T+GD+ R+  + L   +  +VM  NP  +    L   A+ ++    I+ L  +D  +
Sbjct: 1   GIVTDGDLRRHM-QGLLDHTAGEVMSANPTTVSPHALAEEAVNIMNSRKITCLFALDPAN 59

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K  GI+H  D LR GI+
Sbjct: 60  PGKVTGILHIHDCLRAGIV 78


>gi|225016740|ref|ZP_03705932.1| hypothetical protein CLOSTMETH_00652 [Clostridium methylpentosum
           DSM 5476]
 gi|224950408|gb|EEG31617.1| hypothetical protein CLOSTMETH_00652 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score =  101 bits (253), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 68/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP- 231
             P  +A M       +AIA+            V+H    +         V  S + +  
Sbjct: 58  NTPVMTAAMDTVTQSDMAIAIAREGGIG-----VIHKNMPIEQQAQEVDRVKRSENGVID 112

Query: 232 ---LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  ++   +   V +V+EG KL GIIT  D+   F  D N + + +V
Sbjct: 113 NPFSLTPDRLVADADKLMGNFKISGVPIVEEGGKLVGIITNRDLR--FLTDYN-VPIREV 169

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  NP V     T L  A  +L +H I  L +VDD     G++   D+ + 
Sbjct: 170 MTCNPLVTAPVGTTLEQAQAILSKHKIEKLPLVDDEGYLKGLITIKDIEKA 220


>gi|206901253|ref|YP_002251206.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
 gi|206740356|gb|ACI19414.1| polyA polymerase family protein [Dictyoglomus thermophilum H-6-12]
          Length = 845

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 10/175 (5%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
            +         P         + ++  I L  + +          P   L    +     
Sbjct: 263 VDLREVLRDFNPGGHKTATTIVLNSQEIGLNSAEDLVIERLKKYLPRDFLAKDIM----- 317

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                 +  +     + +A  I+ +  +G + V +E +KL GII+  DI R  +  L   
Sbjct: 318 ---SYPVVTIPPDISIKEAFKIMMKYGYGGLCV-EENKKLVGIISRRDIERAINLKLTKR 373

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+  M K    +  +T +    ++L + NI  + V+D   K +GI+   D+LRF
Sbjct: 374 KVKSFMSKPVITVTPETPIWEIEKILVEKNIGRVPVLDGD-KIVGIITRQDILRF 427



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 39/106 (36%), Gaps = 3/106 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKN 292
               L + +   +         +    +  G+ +  D+      K L      +D+M   
Sbjct: 261 PNVDLREVLRDFNPGGHKTATTIVLNSQEIGLNSAEDLVIERLKKYLPRDFLAKDIMSYP 320

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I  D  +  A +++ ++    L  V++ +K +GI+   D+ R 
Sbjct: 321 VVTIPPDISIKEAFKIMMKYGYGGL-CVEENKKLVGIISRRDIERA 365


>gi|120601585|ref|YP_965985.1| CBS domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|120561814|gb|ABM27558.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
          Length = 256

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 27/144 (18%), Positives = 58/144 (40%), Gaps = 12/144 (8%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
              P  +                ++  V     ++ A  ++ E  F  + V+D   KL G
Sbjct: 16  RNRPVRQDRRKEATMLIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIG 75

Query: 266 IITEGDIFRN------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           I+++ DI                +  L+ + V+D+M ++P  +  D  +     L+ + +
Sbjct: 76  IVSDRDIKEASPSKATTLDMHELYYLLSEIKVKDIMTRDPICVQPDETVERVALLMIEKH 135

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  + VVD+  + +GI+   D+ +
Sbjct: 136 IGGMPVVDEEGQLVGIITDSDIFK 159



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   +   T+ + + M +N   +  DT +  A +L++++    L V+D   K IGIV   
Sbjct: 21  RQDRRKEATMLIREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDR 80

Query: 334 DLLRF 338
           D+   
Sbjct: 81  DIKEA 85



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V+    +     ++ EK  G + VVDE  +L GIIT+ DIF+  
Sbjct: 111 MTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITDSDIFKVL 161


>gi|56460285|ref|YP_155566.1| signal protein [Idiomarina loihiensis L2TR]
 gi|56179295|gb|AAV82017.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Idiomarina loihiensis
           L2TR]
          Length = 610

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 5/134 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                 GT    +   + S  S+P V +     + +A  +++      V VVD+  +L G
Sbjct: 132 EQKSDDGTDSDWSEQTVGSVVSMPPVSLSSSTSVQEAAKLMASHGISSVLVVDDT-QLVG 190

Query: 266 IITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+ D+  R   + L   + V  VM + P+ + E+  L  A+  +   NI  L VV+D 
Sbjct: 191 ILTDRDLRNRVVAEGLPLDVRVSSVMTQLPESVYENRSLMDALTTMTSSNIHHLPVVNDQ 250

Query: 324 QKAIGIVHFLDLLR 337
            + +G+V   DL+R
Sbjct: 251 NQPVGMVTATDLIR 264


>gi|219559585|ref|ZP_03538661.1| inositol-5'-monophosphate dehydrogenase [Mycobacterium tuberculosis
           T17]
          Length = 242

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 76/205 (37%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            + ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 35  KVAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 94

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 95  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 152

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E    + A+ LLR++
Sbjct: 153 LPVVDDDGALVGIITNRDMRFEVDQ---SKQVAEVMTKAPLITAQEGVSASAALGLLRRN 209

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VVD   +  G++   D ++
Sbjct: 210 KIEKLPVVDGRGRLTGLITVKDFVK 234


>gi|124027017|ref|YP_001012337.1| transcriptional regulator [Hyperthermus butylicus DSM 5456]
 gi|123977711|gb|ABM79992.1| predicted transcriptional regulator [Hyperthermus butylicus DSM
           5456]
          Length = 296

 Score =  101 bits (252), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 57/113 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           S  +I  ++    + DA  ++ E+R   + V+D   +L GIIT+ DI +   +     +V
Sbjct: 179 SIGNIITIEPDATIKDAAKLMIERRVKGLPVIDSRGRLIGIITQTDIAKAVAEGRIDATV 238

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ M      I  D  +  A++L+   +I  L+V D   K IGI+   D+L+F
Sbjct: 239 KEYMSFPVITIRSDEDIGDAIELMNLRDIGRLVVTDSEGKPIGIITRTDILKF 291



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 282 TLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V ++    N   I  D  +  A +L+ +  +  L V+D   + IGI+   D+ + 
Sbjct: 171 RIPVGEIASIGNIITIEPDATIKDAAKLMIERRVKGLPVIDSRGRLIGIITQTDIAKA 228



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 54/152 (35%), Gaps = 6/152 (3%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+  I    ++  I +  + S  +  V   A I   +  EP++     A        +  
Sbjct: 148 EVTHIDLATKQIGIKITRLISVPRIPVGEIASIGNIITIEPDATIKDAA------KLMIE 201

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
                + +++SR               +    + A+   +    +  ++    + DAI +
Sbjct: 202 RRVKGLPVIDSRGRLIGIITQTDIAKAVAEGRIDATVKEYMSFPVITIRSDEDIGDAIEL 261

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           ++ +  G + V D   K  GIIT  DI +   
Sbjct: 262 MNLRDIGRLVVTDSEGKPIGIITRTDILKFIA 293


>gi|258510031|ref|YP_003183465.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
 gi|257476757|gb|ACV57076.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius subsp. acidocaldarius DSM 446]
          Length = 494

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 17/202 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  H+ ++   + +     +      P  SA M       +AIA+      
Sbjct: 13  ALTFDDVLLLPAHSTVLPRDVDVSTRLTTDIRLNIPIVSAAMDTVTTSPMAIAMAREGGI 72

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V  S   +           PL DA  ++S+ R   V 
Sbjct: 73  G-----IIHKNMSIEAQAEEVDRVKRSESGVITNPIYLTPDKPLRDAEALMSKYRISGVP 127

Query: 256 VVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHN 313
           +V+ G QKL GIIT  D+   F +D ++  + +VM + N       T L  A ++L++H 
Sbjct: 128 IVECGSQKLIGIITNRDLR--FERD-DSRPIGEVMTRENLITAPVGTTLAEAKEILQRHK 184

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           I  L +VD      G++   D+
Sbjct: 185 IEKLPLVDAEGNLRGLITIKDI 206


>gi|222824158|ref|YP_002575732.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100]
 gi|222539380|gb|ACM64481.1| inosine-5'-monophosphate dehydrogenase [Campylobacter lari RM2100]
          Length = 483

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NMPLISAAMDTVTEHRAAIMMARLGGIG-----VIHKNMDIASQVREIKRVKKSESGVII 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ +++E R   V VVDE + L GI+T  D+   F  + + L VE+V
Sbjct: 95  DPIYIGAKASVKEALELMAEYRISGVPVVDENKTLIGILTNRDLR--FETNFDNL-VENV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     + + L  A ++   + +  L +VD+     G++   DL +
Sbjct: 152 MTKMPLITAKKGSTLDDAERIFSTNKVEKLPIVDENNHLEGLITIKDLKK 201


>gi|309791677|ref|ZP_07686169.1| inosine-5'-monophosphate dehydrogenase [Oscillochloris trichoides
           DG6]
 gi|308226299|gb|EFO80035.1| inosine-5'-monophosphate dehydrogenase [Oscillochloris trichoides
           DG6]
          Length = 490

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL             +H    +         V  S      
Sbjct: 46  NIPIVSAAMDTVSEHRLAIALAREGGIG-----FIHKNMGIEAQAEMVRKVKRSESGMIT 100

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ +++E R   V +      L GI+T  D+   F  D  +  + ++
Sbjct: 101 DPITLPPDKTVGDALDLMAEYRISGVPICTGDNDLVGILTNRDLR--FETD-RSRPISEL 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  KN   + E T L  A  +L +H I  ++VV+   K  G++   D+++
Sbjct: 158 MTSKNLVTVPEGTTLEQAKAVLNRHRIEKVLVVNSRGKLSGMITVKDIMK 207



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 46/113 (40%), Gaps = 15/113 (13%)

Query: 230 IPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              V++  P +  A+  +SE R   +A+  EG    G I      +N   +     V  V
Sbjct: 40  TRKVRLNIPIVSAAMDTVSEHRL-AIALAREGG--IGFI-----HKNMGIEAQAEMVRKV 91

Query: 289 ------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 MI +P  +  D  +  A+ L+ ++ IS + +       +GI+   DL
Sbjct: 92  KRSESGMITDPITLPPDKTVGDALDLMAEYRISGVPICTGDNDLVGILTNRDL 144



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  ++  V  G  L  A  +L+  R   V VV+   KL G+IT  DI +   
Sbjct: 158 MTSKNLVTVPEGTTLEQAKAVLNRHRIEKVLVVNSRGKLSGMITVKDIMKQIE 210


>gi|299755073|ref|XP_001828409.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
           okayama7#130]
 gi|298411057|gb|EAU93401.2| CBS and PB1 domain-containing protein [Coprinopsis cinerea
           okayama7#130]
          Length = 719

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 8/130 (6%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GK        + +  S      V     + +A  + + KR  CV VVDE + L GI T  
Sbjct: 111 GKNAPTKGTVAALKPSPALT--VPENITVAEASQLCAAKRTDCVLVVDEEEGLSGIFTAK 168

Query: 271 DIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           D+         D ++  V  +M +NP V  + T  T A+QL+   +   L V ++    +
Sbjct: 169 DLAYRVTAEGLDPHSTPVAQIMTRNPMVTRDTTSATEALQLMVSRHFRHLPVCNEDGNVV 228

Query: 328 GIVHFLDLLR 337
           G++   D+ +
Sbjct: 229 GLL---DITK 235



 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 12/126 (9%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ------KLKGIITEGDI-FR 274
            VM S      V     + D   ++ E+R   V V++         ++ GI T  D+  R
Sbjct: 295 TVMDSRTHPATVGPKTTVRDVAKLMKERRTTAVCVMEPPGPGTPHPRIAGIFTSKDVVLR 354

Query: 275 NFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                L+    SV  VM  +P        +  A++ +   +   L VV++  + + IV  
Sbjct: 355 VIAAGLDAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVVEEDGRLVAIV-- 412

Query: 333 LDLLRF 338
            D+L+ 
Sbjct: 413 -DVLKL 417



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 23/193 (11%), Positives = 57/193 (29%), Gaps = 60/193 (31%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D         L       + +M       + +      +A+ ++  + F  + V +
Sbjct: 165 FTAKDLAYRVTAEGLDPHSTPVAQIMTRNPM--VTRDTTSATEALQLMVSRHFRHLPVCN 222

Query: 259 EGQKLKGIITEGDIFRNFHKDL----NTLSVED--------------------------- 287
           E   + G++   DI + FH+ L     + +  +                           
Sbjct: 223 EDGNVVGLL---DITKVFHEALGKVERSSAASEQLFNAMAGVQSELGGVGSNPQAAAMLA 279

Query: 288 ----------------VM--IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ----- 324
                           VM    +P  +   T +    +L+++   + + V++        
Sbjct: 280 WAEKLREKTALPDLTTVMDSRTHPATVGPKTTVRDVAKLMKERRTTAVCVMEPPGPGTPH 339

Query: 325 -KAIGIVHFLDLL 336
            +  GI    D++
Sbjct: 340 PRIAGIFTSKDVV 352



 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 18/56 (32%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
             G      S V               + DA+  +    +  + VV+E  +L  I+
Sbjct: 357 AAGLDAGRCSVVRVMTPHPDTAPPTMTVHDALKKMHNGHYLNLPVVEEDGRLVAIV 412


>gi|167465591|ref|ZP_02330680.1| inositol-5-monophosphate dehydrogenase [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 375

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  E         P  S+ M      A+AIA+            ++H    +      
Sbjct: 30  IDISSELSPNVKLNIPFLSSAMDTVTEAAMAIAMAREGGIG-----IIHKNMSIDQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   +            + DA  ++++ R   V +V+E  KL GI+T  D+   
Sbjct: 85  VDRVKRSESGVITNPFSLTPDHHVYDAEALMAKYRISGVPIVNEQNKLVGILTNRDLR-- 142

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D  ++ +++VM   N       T L  A  +L+QH I  L +VD+  +  G++   D
Sbjct: 143 FVHDF-SIQIKEVMTHDNLVTAPVGTTLEQAEVILQQHKIEKLPLVDEHNELKGLITIKD 201

Query: 335 LLRF 338
           + + 
Sbjct: 202 IEKA 205


>gi|171186288|ref|YP_001795207.1| CBS domain-containing protein [Thermoproteus neutrophilus V24Sta]
 gi|170935500|gb|ACB40761.1| CBS domain containing protein [Thermoproteus neutrophilus V24Sta]
          Length = 688

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVE 286
                V     L D + I++EK  G V VV E  +L G I+E D  +    +      VE
Sbjct: 577 RDPITVPPSATLRDVLKIMAEKNIGFVPVV-EDGRLVGGISESDFVQILLNNTPLDTPVE 635

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM      I     +  A +L+ +HNI  L VV +  K +G++   DLL+ 
Sbjct: 636 KVMRCQLITIERTRPVKEAAELMVKHNIRHLPVV-EDGKVVGVLSVRDLLKA 686



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/166 (15%), Positives = 56/166 (33%), Gaps = 19/166 (11%)

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLF---------VCASDVMHSGDSIPLVKIGCPLI 240
           A A   +            P G  G               ++V      +  V    PL 
Sbjct: 460 AAAQKMAEGVRAVVIAASKPVGVFGRRQLIRALASGATPEAEVGRFATRVDCVGEDAPLT 519

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH-------KDLNTLSVEDVMIKN 292
           +    + +     V +  +G ++ GII   ++             K   ++S  D + ++
Sbjct: 520 EVFAAMEKYGVRDVPIC-KGDEVVGIIEARELLNEALALRGIVNKKKALSVSAGDAVARD 578

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  +     L   ++++ + NI  + VV +  + +G +   D ++ 
Sbjct: 579 PITVPPSATLRDVLKIMAEKNIGFVPVV-EDGRLVGGISESDFVQI 623



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 42/134 (31%), Gaps = 9/134 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        LGT                ++    P+  A   ++E   G  AVV    K 
Sbjct: 426 FKGWE---TLGTRIWAELAAGKFAKKAVVLPPTAPIRAAAQKMAE---GVRAVVIAASKP 479

Query: 264 KGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            G+     + R           V     +    + ED  LT     + ++ +  + +   
Sbjct: 480 VGVFGRRQLIRALASGATPEAEVGRFATR-VDCVGEDAPLTEVFAAMEKYGVRDVPIC-K 537

Query: 323 CQKAIGIVHFLDLL 336
             + +GI+   +LL
Sbjct: 538 GDEVVGIIEARELL 551



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 24/169 (14%), Positives = 53/169 (31%), Gaps = 15/169 (8%)

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           I + D ++ +     + EL       R       A++      VA     V   P     
Sbjct: 535 ICKGDEVVGII---EARELLNEALALRGIVNKKKALSVSAGDAVARDPITV--PPSATLR 589

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
               +    +      + D   +        SE+DF  +     L    +          
Sbjct: 590 DVLKIMAEKNIGFVPVVEDGRLVG-----GISESDFVQI----LLNNTPLDTPVEKVMRC 640

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  ++   P+ +A  ++ +     + VV E  K+ G+++  D+ +   
Sbjct: 641 QLITIERTRPVKEAAELMVKHNIRHLPVV-EDGKVVGVLSVRDLLKAVA 688


>gi|218290704|ref|ZP_03494786.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius LAA1]
 gi|218239242|gb|EED06441.1| inosine-5'-monophosphate dehydrogenase [Alicyclobacillus
           acidocaldarius LAA1]
          Length = 494

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 17/202 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  H+ ++   + +     +      P  SA M       +AIA+      
Sbjct: 13  ALTFDDVLLLPAHSTVLPRDVDVSTRLTTDIRLNIPIVSAAMDTVTTSPMAIAMAREGGI 72

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V  S   +           PL DA  ++S+ R   V 
Sbjct: 73  G-----IIHKNMSIEAQAEEVDRVKRSESGVITNPIYLTPDKPLRDAEALMSKYRISGVP 127

Query: 256 VVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHN 313
           +V+ G QKL GIIT  D+   F +D ++  + +VM + N       T L  A ++L++H 
Sbjct: 128 IVECGSQKLIGIITNRDLR--FERD-DSRPIGEVMTRENLITAPVGTTLAEAKEILQRHK 184

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           I  L +VD      G++   D+
Sbjct: 185 IEKLPLVDAEGNLRGLITIKDI 206


>gi|323478188|gb|ADX83426.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 129

 Score =  101 bits (252), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +   ++  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +  +
Sbjct: 9   YMKSNVVTVSRNTVLREVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGRSLDV 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 68  KAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  N   +  +T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 6   VREYMKSNVVTVSRNTVLREVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 58



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                    S+  +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 67  VKAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAID 124


>gi|206895349|ref|YP_002246487.1| inosine-5'-monophosphate dehydrogenase [Coprothermobacter
           proteolyticus DSM 5265]
 gi|206737966|gb|ACI17044.1| inosine-5'-monophosphate dehydrogenase [Coprothermobacter
           proteolyticus DSM 5265]
          Length = 485

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 66/181 (36%), Gaps = 14/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       LAIAL            ++H    +      
Sbjct: 29  VDISTKLTKDVTLNIPLISAAMDTVTEARLAIALAREGGIG-----IIHKNMSIDRQAEE 83

Query: 220 ASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S         ++     L DA+ ++       + +  E  KL GIIT  DI   
Sbjct: 84  VDKVKRSEFGIIYKPVVLGPKATLADALALMEHYHISGIPITVE-GKLVGIITNRDIR-- 140

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D   L +EDVM K N       T L  A Q+L+ H I  L +VD+     G++   D
Sbjct: 141 FEDDFTQL-IEDVMTKKNLVTAPVGTSLEEARQILKAHKIEKLPLVDEEGYLKGLITIKD 199

Query: 335 L 335
           L
Sbjct: 200 L 200


>gi|124486199|ref|YP_001030815.1| inosine-5'-monophosphate dehydrogenase [Methanocorpusculum
           labreanum Z]
 gi|124363740|gb|ABN07548.1| inosine-5'-monophosphate dehydrogenase [Methanocorpusculum
           labreanum Z]
          Length = 489

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 2/164 (1%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  +            P  ++  +    S        +  
Sbjct: 44  SIPLVSAAMDTVTEAEMAISMARAGGIGVLH-RNCTPDEEVSFVTRVKSADNVIERDVRY 102

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     +     ++     G V VV    KL GI++  D+    +K   T +VE +M K 
Sbjct: 103 VTPDTTIALVANLMDRHSIGGVPVVGPHGKLLGIVSRRDVRGLVNK-TGTETVETIMTKK 161

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ++     A+ ++    +  L VVDD  +  GI+   DLL
Sbjct: 162 PIAVKDNITADDAINMMYTKKVERLPVVDDKGRLTGIITMQDLL 205


>gi|328949768|ref|YP_004367103.1| inosine-5'-monophosphate dehydrogenase [Marinithermus
           hydrothermalis DSM 14884]
 gi|328450092|gb|AEB10993.1| inosine-5'-monophosphate dehydrogenase [Marinithermus
           hydrothermalis DSM 14884]
          Length = 489

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 46/171 (26%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            VLH    +         V  S      
Sbjct: 45  NIPILSAAMDTVTEARMAIAVAREGGIG-----VLHKNLSIEEQAAMVRKVKRSEAGMIT 99

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  +++E + G + VVD    L G++T  DI   F  DLN   V +V
Sbjct: 100 DPITLPPTATLEDAERLMAEYKIGGLPVVDLYGTLLGLVTNRDIR--FETDLNR-PVTEV 156

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M            T L  A ++LRQH I  L +VD+  K  G++   D+++
Sbjct: 157 MTPRERLVTAPVGTTLDDAEEILRQHKIEKLPLVDESGKLKGLLTLKDIVK 207


>gi|227828393|ref|YP_002830173.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229585622|ref|YP_002844124.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620585|ref|YP_002915411.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|227460189|gb|ACP38875.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228020672|gb|ACP56079.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381655|gb|ACR42743.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|323475466|gb|ADX86072.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
          Length = 129

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +   ++  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +  +
Sbjct: 9   YMKSNVVTVSKNTVLREVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGRSLDV 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 68  KAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  N   + ++T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 6   VREYMKSNVVTVSKNTVLREVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 58



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                    S+  +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 67  VKAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAID 124


>gi|126460001|ref|YP_001056279.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249722|gb|ABO08813.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 136

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 1/111 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 +     + +A  +++EK  G +A+VDEG +  GIITE D+ +   +      V 
Sbjct: 7   KRPPITIGRDATVEEAAALMAEKGVGSLAIVDEGGRPVGIITERDVVKAVARRALGARVV 66

Query: 287 DV-MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V    N      +      ++ +R+  +  L+VVD   K +G++   D L
Sbjct: 67  EVGTTSNLLTASPEDDEYEVLKKMRERRVRHLLVVDKEGKLVGVLSIRDFL 117



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 289 MIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           MIKN     P  I  D  +  A  L+ +  +  L +VD+  + +GI+   D+++ 
Sbjct: 1   MIKNYIKRPPITIGRDATVEEAAALMAEKGVGSLAIVDEGGRPVGIITERDVVKA 55


>gi|86750304|ref|YP_486800.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           HaA2]
 gi|86573332|gb|ABD07889.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           HaA2]
          Length = 498

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 46  NIPIIASAMDTVTEARMAIAMAQAGGIGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV-----DEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV     D   KL GI+T  D+            V +
Sbjct: 105 IAPEAKLADALALMTQYGFSGIPVVTGAQGDGPGKLVGILTNRDVRFATDP---AQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A +LL QH I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKA 213



 Score = 36.0 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            + +++  V+ G    +A  +L + R   + VVD+  +  G+IT  D+ +     L +  
Sbjct: 163 MTHENLVTVREGVSQDEAKRLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKD 222

Query: 285 VE 286
            +
Sbjct: 223 AQ 224


>gi|41410376|ref|NP_963212.1| inositol-5-monophosphate dehydrogenase [Mycobacterium avium subsp.
           paratuberculosis K-10]
 gi|118465329|ref|YP_883491.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium avium 104]
 gi|254776785|ref|ZP_05218301.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium avium subsp.
           avium ATCC 25291]
 gi|41399210|gb|AAS06828.1| GuaB2 [Mycobacterium avium subsp. paratuberculosis K-10]
 gi|118166616|gb|ABK67513.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium avium 104]
          Length = 531

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 40/205 (19%), Positives = 75/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            I ++ +T ++  ++   +D+V        +         P  S+ M       +AIA+ 
Sbjct: 39  KIAMLGLTFDDVLLLPAASDVVPATADTSSQLTKKIRLKVPLVSSAMDTVTESRMAIAMA 98

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G + +               +    L     + +  R   
Sbjct: 99  RAGGMG--VLHRNLPVAEQAGQVEMVKRSEAGMVTDPVTCRPDNTLAQVDALCARFRISG 156

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   T  V +VM K P     E      A+ LLR++
Sbjct: 157 LPVVDDSGALVGIITNRDMRFEVDQ---TKKVAEVMTKAPLITAQEGVSADAALGLLRRN 213

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   +  G++   D ++
Sbjct: 214 KIEKLPIVDGHGRLTGLITVKDFVK 238


>gi|328949777|ref|YP_004367112.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328450101|gb|AEB11002.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 264

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 56/141 (39%), Gaps = 15/141 (10%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG              + + I  V    P+ +AI ++ EK F  + VV+   +L GI+T+
Sbjct: 40  GGTARKEASMLVRDWMTPNPIT-VSPDTPVPEAIRLMQEKGFRRLPVVNRD-RLVGIVTD 97

Query: 270 GDIFRNFHKD------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            D+                   +  + + +VM      +  D  L  A  L+ +  I  L
Sbjct: 98  RDLKEAMPSKATTLSIWEINYLIAKMPISEVMATPVITVEADKPLEDAALLMEERKIGGL 157

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+ +  K +GI+   D+L+ 
Sbjct: 158 PVL-EGGKLVGIITITDVLKA 177



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+   PL DA  ++ E++ G + V+ EG KL GIIT  D+ + F
Sbjct: 129 MATPVITVEADKPLEDAALLMEERKIGGLPVL-EGGKLVGIITITDVLKAF 178


>gi|116748379|ref|YP_845066.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116697443|gb|ABK16631.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 225

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V     +++   +L++  F  + VVDE  +L GI+T+ DI             
Sbjct: 7   MTKKVVTVGPNDGILETRELLAKSSFRHLPVVDEENRLVGIVTDRDIRSAMPSVFLDENE 66

Query: 277 ----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + L  + ++D+M KNP  +     L  A+ L+++  +    VVD   K  G++  
Sbjct: 67  TLKERERLAQMKIKDIMTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDREGKLRGMLSI 126

Query: 333 LDLLRF 338
            DL+R 
Sbjct: 127 RDLVRA 132



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  M K    +  +  +    +LL + +   L VVD+  + +GIV   D+
Sbjct: 3   IDKSMTKKVVTVGPNDGILETRELLAKSSFRHLPVVDEENRLVGIVTDRDI 53



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   V     L DAI ++   R G   VVD   KL+G+++  D+ R F
Sbjct: 83  MTKNPVTVNPANTLEDAILLMQRMRVGAFPVVDREGKLRGMLSIRDLVRAF 133


>gi|227831149|ref|YP_002832929.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580034|ref|YP_002838434.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581305|ref|YP_002839704.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998647|ref|YP_003420415.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457597|gb|ACP36284.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228010750|gb|ACP46512.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012021|gb|ACP47782.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446543|gb|ADB88045.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 129

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +   ++  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +  +
Sbjct: 9   YMKSNVVTVSKNTVLREVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGKSLDV 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 68  KAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARA 122



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  N   + ++T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 6   VREYMKSNVVTVSKNTVLREVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 58



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                    S+  +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 67  VKAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDHDGNLRGIISIRDIARAID 124


>gi|119511029|ref|ZP_01630149.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
 gi|119464280|gb|EAW45197.1| hypothetical protein N9414_09801 [Nodularia spumigena CCY9414]
          Length = 165

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 42/155 (27%), Positives = 66/155 (42%), Gaps = 29/155 (18%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K  +  +  +          +++   PL +AI IL+EKR   + VVD+  KL GII+E D
Sbjct: 8   KGISKQMSKTVTDIMTRDPIVLRTETPLKEAIQILAEKRISGIPVVDDVGKLVGIISETD 67

Query: 272 IF----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           +                             R  HK L   +V +VM KNP  I  +  + 
Sbjct: 68  LMWQETGVTPPAYIMFLDSVIYLQNPATYDRELHKALGQ-TVGEVMSKNPVTIAPEKTVK 126

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            A QL+   ++  L V+D   + +GIV   D++R 
Sbjct: 127 EAAQLMHDRSVHRLPVIDSQSQVVGIVTRGDIVRA 161



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   +     + +A  ++ ++    + V+D   ++ GI+T GDI R    
Sbjct: 112 MSKNPVTIAPEKTVKEAAQLMHDRSVHRLPVIDSQSQVVGIVTRGDIVRAMAA 164


>gi|15899929|ref|NP_344534.1| hypothetical protein SSO3230 [Sulfolobus solfataricus P2]
 gi|13816671|gb|AAK43324.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
          Length = 156

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +    +  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +   
Sbjct: 36  YMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGKSLDT 94

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 95  IAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 149



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      +  +T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 33  VKEYMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 85



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 107 IKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAID 151


>gi|254459323|ref|ZP_05072744.1| inosine-5'-monophosphate dehydrogenase [Campylobacterales bacterium
           GD 1]
 gi|207083936|gb|EDZ61227.1| inosine-5'-monophosphate dehydrogenase [Campylobacterales bacterium
           GD 1]
          Length = 481

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    +       + V  S   I +
Sbjct: 40  KIPMVSAAMDTVTEYRAAIAMARLGGIG-----IIHKNMNIEAQAKQITKVKKSESGIII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L DA  ++ E +   V VVD   KL GI+T  D+   F KD++    + V
Sbjct: 95  DPIYVHPDATLADADALMKEYKISGVPVVDTHNKLLGILTNRDMR--FEKDMSK-KADQV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P    ++   L  A  ++ ++ I  L ++D+     G+V   D+ +
Sbjct: 152 MTKMPLITAVKGISLDDAGDIMHKNKIEKLPIIDEDGFLKGLVTIKDIRK 201


>gi|302875785|ref|YP_003844418.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
 gi|307689220|ref|ZP_07631666.1| inosine 5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
 gi|302578642|gb|ADL52654.1| inosine-5'-monophosphate dehydrogenase [Clostridium cellulovorans
           743B]
          Length = 485

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 69/173 (39%), Gaps = 13/173 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +A+A+            ++H    +         V    + +  
Sbjct: 41  KIPVISAGMDTVTESKMAMAIAREGGIG-----IIHKNMSIEQQASEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A  ++++ R   V +VD+ +KL GI+T  D+      D  +  V DV
Sbjct: 96  NPFYLHADNTLKEADQLMAKYRISGVPIVDQDRKLVGIVTNRDM---LFVDDLSQKVGDV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M + N    LE T +  A ++L ++ I  L +VD+     G++   D+ +  I
Sbjct: 153 MTRENLITALEGTSIEEAKKILMKNKIEKLPLVDENNVLKGLITIKDIEKVRI 205


>gi|88607628|ref|YP_504716.1| inosine-5'-monophosphate dehydrogenase [Anaplasma phagocytophilum
           HZ]
 gi|88598691|gb|ABD44161.1| inosine-5'-monophosphate dehydrogenase [Anaplasma phagocytophilum
           HZ]
          Length = 486

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI++ +           +H    +         V         
Sbjct: 37  NIPIMSAAMDTVTESRLAISVAQHGGIG-----CIHKNMSIERQVAEVQKVKKFESWIVS 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   V     L  A++I+ +  +  + VV+E +KL GIIT  D+   F +D+N   V D+
Sbjct: 92  NPVTVSPDATLKTALSIMQQHSYSGIPVVEENKKLVGIITNRDVR--FVEDMN-CRVCDI 148

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   + E    + A +LL +H I  L+V D+    IG++   D+ +F
Sbjct: 149 MTKENLVTVREGVSQSEATRLLHKHKIERLIVTDEYGCCIGLITVKDIEKF 199


>gi|15668271|ref|NP_247064.1| hypothetical protein MJ_0100 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2495797|sp|Q57564|Y100_METJA RecName: Full=Uncharacterized protein MJ0100
 gi|1498865|gb|AAB98080.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 509

 Score =  101 bits (251), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N 
Sbjct: 402 HSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNV 459

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ED  +      + ++NIS + VVDD ++ +GIV   D+ R 
Sbjct: 460 ITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL 504



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K P     +  +  A ++L +HNI+ L +VD+  K +GI+   D+ + 
Sbjct: 390 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 443



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P+      +S+     V VVD+ +++ GI+T 
Sbjct: 441 AKALAQNKKTIEEIMTRNVITA--HEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTS 498

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 499 EDISRLFG 506


>gi|213964905|ref|ZP_03393104.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium amycolatum
           SK46]
 gi|213952441|gb|EEB63824.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium amycolatum
           SK46]
          Length = 515

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 77/210 (36%), Gaps = 16/210 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             IPL+ +T ++  ++   +D++   +    +         P  SA M       +A+A+
Sbjct: 21  NKIPLVGLTFDDVLLLPDASDVIPSGVDTSTQLTRELRLNIPIVSAAMDTVTEARMAVAM 80

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       +LH    +         V  S                + +     +  
Sbjct: 81  ARQGG-----MGILHRNLSIEEQAQQVEIVKRSEAGMVSDPVTCSPDDTIAEVDAKCARY 135

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQL 308
           R   + VVD+  KL GI T  D+   F  DLN   V ++M   P V+ E       A+ L
Sbjct: 136 RISGLPVVDKDGKLVGICTNRDMR--FEADLNR-KVSEIMTPMPLVVAEQGVSGDAALNL 192

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LR H +  L +VD   +  G++   D ++ 
Sbjct: 193 LRAHKVEKLPIVDGEGRLTGLITVKDFVKK 222


>gi|57640129|ref|YP_182607.1| inositol-5-monophosphate dehydrogenase [Thermococcus kodakarensis
           KOD1]
 gi|57158453|dbj|BAD84383.1| inosine-5'-monophosphate dehydrogenase [Thermococcus kodakarensis
           KOD1]
          Length = 486

 Score =  100 bits (250), Expect = 2e-19,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 62/169 (36%), Gaps = 14/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEQVKRVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    L  A+ ++       + VVD+  ++ G+IT+ DI            V +V
Sbjct: 102 DVISIKPDESLDYALFLMERNGVDGLPVVDDEGRVVGVITKKDI-----AAKQGSKVSEV 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M      + E      A+Q++  H I  L VVD   + +GI+   DL +
Sbjct: 157 MTGEVITVPETVTAEEAVQIMFDHRIDRLPVVDGEGRLVGIITMSDLAK 205



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           V       +A+ I+ + R   + VVD   +L GIIT  D+ + 
Sbjct: 164 VPETVTAEEAVQIMFDHRIDRLPVVDGEGRLVGIITMSDLAKR 206


>gi|307153895|ref|YP_003889279.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7822]
 gi|306984123|gb|ADN16004.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7822]
          Length = 908

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       ++VVDE  +L GII+  DI    H   +   V
Sbjct: 325 MSSPVRTIRPDTTIEQAQRVLFRYGHSGLSVVDENDQLVGIISRRDIDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +NPK I  DT L     L+  +++  L VV +  + +GIV   D+LR
Sbjct: 385 KGYMTRNPKTITPDTSLPEIEDLMVTYDLGRLPVV-ENGQLMGIVTRTDVLR 435



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   +   +     L +   ++     G + VV E  +L GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMTRNPKTITPDTSLPEIEDLMVTYDLGRLPVV-ENGQLMGIVTRTD 432

Query: 272 IFRNFHKDLNTLS 284
           + R  H+D     
Sbjct: 433 VLRQIHQDRLEKK 445


>gi|307720713|ref|YP_003891853.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica
           DSM 16294]
 gi|306978806|gb|ADN08841.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas autotrophica
           DSM 16294]
          Length = 481

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    + T       V  S   I +
Sbjct: 40  KIPMVSAAMDTVTEYRAAIAMARLGGIG-----IIHKNMDIETQCKQVKKVKKSESGIII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L DA  ++ E +   V VVD   KL GI+T  D+   F K++   S E+V
Sbjct: 95  DPIYVHPDATLADAEALMKEFKISGVPVVDGHNKLLGILTNRDMR--FEKNMRK-SAEEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A  ++ Q+ I  L ++D+     G+V   D+ +
Sbjct: 152 MTKMPLITAKKGISLDEAADIMHQNKIEKLPIIDNEGFLKGLVTIKDIKK 201


>gi|296138636|ref|YP_003645879.1| inosine-5'-monophosphate dehydrogenase [Tsukamurella paurometabola
           DSM 20162]
 gi|296026770|gb|ADG77540.1| inosine-5'-monophosphate dehydrogenase [Tsukamurella paurometabola
           DSM 20162]
          Length = 514

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 76/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           F + ++ +T ++  +V   +D++   + +  +         P  S+ M       +AIA+
Sbjct: 23  FKVAMLGLTFDDVLLVPAASDVIPSGVDISTKLTREISLKVPLISSAMDTVTEARMAIAM 82

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
             +         VLH    + +       V  S                L +   + +  
Sbjct: 83  ARNGG-----MGVLHRNLSIESQAQQVETVKRSEAGMVTDPVTCSPSNTLREVDEMCARF 137

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   + V D+   L GIIT  D+            V +VM K P     E      A+ L
Sbjct: 138 RISGLPVTDDKGTLVGIITNRDMRFEVD---FERPVAEVMTKAPLITAQEGVTAEAALGL 194

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 195 LRRHKIEKLPIVDGSGKLTGLITVKDFVK 223


>gi|160903333|ref|YP_001568914.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
 gi|160360977|gb|ABX32591.1| inosine-5'-monophosphate dehydrogenase [Petrotoga mobilis SJ95]
          Length = 483

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 14/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +A A+       E    V+H    +       S V  +      
Sbjct: 37  KIPFLSAAMDTVTESQMAKAMA-----REGAVGVIHKNMSIEQQAYEVSKVKKTENGIIY 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  I+ E R G + VVD+ + L GI+T  DI   F +++     +++
Sbjct: 92  DPITITPDTTVKEAEKIMREYRIGGLPVVDDDKVLLGILTNRDIR--FEQNM-EKKAKEL 148

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M    N  V      L  A ++L Q+ I  L +VDD +   G++   D+ 
Sbjct: 149 MTPYQNLVVAGSHISLEEAKEILHQNKIEKLPIVDDKRHIKGLITIKDIT 198


>gi|67922052|ref|ZP_00515568.1| CBS:Polynucleotide adenylyltransferase [Crocosphaera watsonii WH
           8501]
 gi|67856268|gb|EAM51511.1| CBS:Polynucleotide adenylyltransferase [Crocosphaera watsonii WH
           8501]
          Length = 904

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     +  A  +L       ++VVDE   L GII+  D+    H   +   V
Sbjct: 325 MSSPVRTIHPETTIEQAERVLFRYGHSGLSVVDEKDHLVGIISRRDLDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M KN K I  DTLL     ++  +++  L V+DD  + +GIV   DLLR
Sbjct: 385 KGYMTKNIKTINPDTLLPDIESIMVTYDVGRLPVIDD-NRLLGIVTRTDLLR 435



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 33/71 (46%), Gaps = 4/71 (5%)

Query: 269 EGDIFRNFHKDLNTLS----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +G + +   + +  +       D+M    + I  +T +  A ++L ++  S L VVD+  
Sbjct: 301 DGKLKQLVEEFITQIPHPLNARDLMSSPVRTIHPETTIEQAERVLFRYGHSGLSVVDEKD 360

Query: 325 KAIGIVHFLDL 335
             +GI+   DL
Sbjct: 361 HLVGIISRRDL 371



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   +I  +     L D  +I+     G + V+D+  +L GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMTKNIKTINPDTLLPDIESIMVTYDVGRLPVIDDN-RLLGIVTRTD 432

Query: 272 IFRNFHKDLNTLS 284
           + R  H+    + 
Sbjct: 433 LLRQIHQQRKEVK 445


>gi|78776969|ref|YP_393284.1| inositol-5-monophosphate dehydrogenase [Sulfurimonas denitrificans
           DSM 1251]
 gi|78497509|gb|ABB44049.1| inosine-5'-monophosphate dehydrogenase [Sulfurimonas denitrificans
           DSM 1251]
          Length = 481

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    + T       V  S   + +
Sbjct: 40  KIPMVSAAMDTVTEYRAAIAMARLGGIG-----IIHKNMDIETQCKQVKKVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L DA  ++SE +   V V++   KL GI+T  D+   F KD+ T   ++V
Sbjct: 95  DPIYVYPDATLADADALMSEFKISGVPVINAHNKLLGILTNRDMR--FQKDM-TKRADEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A  ++ ++ I  L ++DD     G+V   D+ +
Sbjct: 152 MTKMPLITAKKGISLDDAADIMHKNKIEKLPIIDDDGFLKGLVTIKDIKK 201



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                  +D + +   +   K G  L DA  I+ + +   + ++D+   LKG++T  DI 
Sbjct: 141 QKDMTKRADEVMTKMPLITAKKGISLDDAADIMHKNKIEKLPIIDDDGFLKGLVTIKDIK 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|315127532|ref|YP_004069535.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas sp. SM9913]
 gi|315016046|gb|ADT69384.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas sp. SM9913]
          Length = 612

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIK 291
                +  +   + E     + +  E   L G++T+ D+  R    +++   ++  +M  
Sbjct: 163 PPDASIRHSAKKMQEHGVSSIMIT-ENSHLVGVVTDRDLRNRVLADEVDPAQAINSIMTN 221

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            PK I E+  +  A+ L+ +HNI  L V+D+  K +G++   DLLR
Sbjct: 222 KPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPLGMITSTDLLR 267



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + ++M +    +  D  +  + + +++H +S +M+ ++    +G+V   DL
Sbjct: 146 WSERKISEIMTRKAITLPPDASIRHSAKKMQEHGVSSIMITENS-HLVGVVTDRDL 200



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 21/49 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +    +     +  A+ ++ +     + V+DE  K  G+IT  D+ R
Sbjct: 219 MTNKPKFIFENNRVFSALHLMLKHNIHHLPVLDENHKPLGMITSTDLLR 267


>gi|260654557|ref|ZP_05860047.1| inosine-5'-monophosphate dehydrogenase [Jonquetella anthropi E3_33
           E1]
 gi|260630573|gb|EEX48767.1| inosine-5'-monophosphate dehydrogenase [Jonquetella anthropi E3_33
           E1]
          Length = 491

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 48/202 (23%), Positives = 70/202 (34%), Gaps = 25/202 (12%)

Query: 151 VVACHADIVLTLPKEPESCPH----GLAPTTSAIMQLAIGDALAIALLE-------SRNF 199
           ++      VL      +S          P  SA M       LAIA+          RN 
Sbjct: 19  LLEPQYSEVLPAQVAVDSWITPEIKINIPICSAAMDTVTEGRLAIAIAREGGIGIVHRNL 78

Query: 200 SENDFYV-LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S +D    +    +     +     +H            P+ DA+ ++S      V VVD
Sbjct: 79  SIDDQAREVDKVKRSEAGVITDPFYLH---------PENPVQDALDLMSHYHISGVPVVD 129

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVL 317
              KL GIIT  D+      D     +  VM K       E T L  A ++LR   +  L
Sbjct: 130 HNMKLVGIITNRDLRFI---DDFVQPISAVMTKEGLITAPEGTTLADAEEILRHVKVEKL 186

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            +VD   K  G++   DL +  
Sbjct: 187 PLVDKNGKLKGLITIKDLQKVK 208



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 18/147 (12%)

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
             + F+ +D  +     ++    V     +     I +         A+  ++E R   +
Sbjct: 9   PYQGFTFDDVLLEPQYSEVLPAQVAVDSWITPEIKINIPICSA----AMDTVTEGRL-AI 63

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MIKNPKVILEDTLLTVAMQL 308
           A+  EG    GI+      RN   D     V+ V      +I +P  +  +  +  A+ L
Sbjct: 64  AIAREGG--IGIV-----HRNLSIDDQAREVDKVKRSEAGVITDPFYLHPENPVQDALDL 116

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  ++IS + VVD   K +GI+   DL
Sbjct: 117 MSHYHISGVPVVDHNMKLVGIITNRDL 143


>gi|226305422|ref|YP_002765380.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           PR4]
 gi|226184537|dbj|BAH32641.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus erythropolis
           PR4]
          Length = 507

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 77/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + ++ +T ++  ++   +D++   +    +         P  S+ M       +AIA+
Sbjct: 16  NKVAMLGLTYDDVLLLPAASDVIPSQVDTSSQLTRDIRLRIPLVSSAMDTVTESRMAIAM 75

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
             +         VLH    +         V  S           K    + +     +  
Sbjct: 76  ARAGG-----MGVLHRNSSVEVQAGQVETVKRSEAGMVTDPVTCKPTDTMGEVDAKCARF 130

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   + V D+  +L GI+T  D+     ++     V ++M K P     E     VA+ L
Sbjct: 131 RISGLPVTDDAGQLVGIVTNRDMRFEVDQN---RPVVEIMTKMPLITAQEGVTADVALGL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H I  L +VD   K  G++   D ++
Sbjct: 188 LRRHKIEKLPIVDGNGKLTGLITVKDFVK 216


>gi|88601455|ref|YP_501633.1| hypothetical protein Mhun_0138 [Methanospirillum hungatei JF-1]
 gi|88186917|gb|ABD39914.1| protein of unknown function DUF39 [Methanospirillum hungatei JF-1]
          Length = 503

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 52/129 (40%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                 +                +  +K    + +A   L       + V++E  +L G+
Sbjct: 364 SKQAKPMRETRKVVLVQEIMQRKVVTIKEDQEITEAAKKLLRGETNHLPVLNEQGRLTGV 423

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T  DI +   +    + V+DVM +N    L D  + +A Q +  H IS L VVD   + 
Sbjct: 424 VTTFDIAKAVARPERKVKVQDVMTRNVITTLADEPIDIAAQKMEHHRISALPVVDAQNQC 483

Query: 327 IGIVHFLDL 335
           I I+H  DL
Sbjct: 484 IAILHASDL 492



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+++M +    I ED  +T A + L +   + L V+++  +  G+V   D+ + 
Sbjct: 379 VQEIMQRKVVTIKEDQEITEAAKKLLRGETNHLPVLNEQGRLTGVVTTFDIAKA 432


>gi|307354492|ref|YP_003895543.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus petrolearius
           DSM 11571]
 gi|307157725|gb|ADN37105.1| inosine-5'-monophosphate dehydrogenase [Methanoplanus petrolearius
           DSM 11571]
          Length = 496

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 68/172 (39%), Gaps = 18/172 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIAL  +       RN +  D        ++  + +       
Sbjct: 44  TIPFVSSAMDTVTESGMAIALARAGCLGVLHRNMTAED--------EVEQVTLVKQADDI 95

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + DA  ++       V V+ EG ++ GI++  D+ R         ++
Sbjct: 96  IEREVLTVNSQATVSDAARMMQNYSISGVPVM-EGDEIIGIVSRRDL-RWIASKKGDQNI 153

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLL 336
             VM  NP  + ED  L  A++++  + +  L VV +  K  IGI+   DLL
Sbjct: 154 RTVMTTNPITVNEDVKLEDALEVMYNNKVERLPVVSEGTKTLIGIITMQDLL 205


>gi|269103712|ref|ZP_06156409.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268163610|gb|EEZ42106.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 620

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 16/194 (8%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           E    +   A ++  +P    +      P  +     A    L  AL    +        
Sbjct: 95  EPYQAITLTACLLYLIPVSKLNSILAQYPEQAQHFATAAQTRLESALNVVWS-------- 146

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                         +    +     +V     + +   I+  +     AV+ E Q++ GI
Sbjct: 147 -----DAEKGLFVETVADVAQRHPAIVDSKMSIKEVARIMRYQHHSSCAVIIENQQIIGI 201

Query: 267 ITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           IT+ D+ +    D       +  VM ++P  I    L+  A+ L+ +HNI  L VVD+ Q
Sbjct: 202 ITDRDMTKRVIADGVSTDAPITQVMTRHPYTIGSQDLVLKAVGLMMEHNIRSLPVVDNQQ 261

Query: 325 KAIGIVHFLDLLRF 338
             +G++   DL+R 
Sbjct: 262 -VVGLLTTSDLVRK 274


>gi|328873281|gb|EGG21648.1| hypothetical protein DFA_01534 [Dictyostelium fasciculatum]
          Length = 222

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNT 282
               + I  V     +I+AI  + +K+ G + VV+   KLKGI +E D + +     L++
Sbjct: 72  KKKDNEIVTVGEHELIINAIRKMVDKKIGSILVVNSENKLKGIFSERDYLSKVNLAGLSS 131

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               VE VM KN K I  DT    AM+++       L VVD+ +  IG+V   DL+
Sbjct: 132 RESPVEQVMTKNVKTIKSDTCTLDAMKIMTTKKFRHLPVVDNNKHIIGVVSIQDLI 187



 Score = 43.7 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 37/85 (43%), Gaps = 2/85 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+  L      G     +        ++  +K     +DA+ I++ K+F  + VVD
Sbjct: 115 FSERDY--LSKVNLAGLSSRESPVEQVMTKNVKTIKSDTCTLDAMKIMTTKKFRHLPVVD 172

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
             + + G+++  D+  + H +    
Sbjct: 173 NNKHIIGVVSIQDLINSVHSNQKET 197


>gi|157961522|ref|YP_001501556.1| CBS domain-containing protein [Shewanella pealeana ATCC 700345]
 gi|157846522|gb|ABV87021.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella pealeana ATCC 700345]
          Length = 615

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H G          S V      S   + +   +  A  ++   R   V V+D   KL
Sbjct: 134 RLRHQGRFKAKELTTTSRVSTLMSKSPQTIDMKASVAQASRLMRTSRVSSVLVID-NNKL 192

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   ++ + +L V   M   P  I  ++L+  AM L+ +HNI  L VVD
Sbjct: 193 VGILTDRDLRNRVLAENHDGSLPVHQAMTTTPVSIESNSLVFEAMLLMSEHNIHHLPVVD 252

Query: 322 DCQKAIGIVHFLDLLR 337
           +     G+V   D+LR
Sbjct: 253 N-GVTTGVVTSTDILR 267


>gi|293553533|ref|ZP_06674160.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1039]
 gi|291602288|gb|EFF32513.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1039]
          Length = 494

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPIISASMDTVTDSKMAIAMARQGGLG-----VIHKNMTISQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPQHLVADAEELMSKYRISGVPIVETLENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D + + + DVM K N       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 --FVTDYH-MPIADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++    +G  L DA  IL + +   + +VD   +L G+IT  DI +   
Sbjct: 156 ADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDIEKVIE 211


>gi|149184705|ref|ZP_01863023.1| IMP dehydrogenase [Erythrobacter sp. SD-21]
 gi|148832025|gb|EDL50458.1| IMP dehydrogenase [Erythrobacter sp. SD-21]
          Length = 487

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 9/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ +         +F +      +  +    S ++    + 
Sbjct: 42  NIPVLSSAMDTVTEADMAIAMAQLGGIGVLHRNFEIDEQAAAVRAVKRYESGMV---VNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L DA  I++  R   + V D   KL GI+T  D+      +     V ++M 
Sbjct: 99  ITIHPDATLGDAQQIMTANRISGIPVTDRSGKLVGILTNRDVRFA---ENPRQPVSELMT 155

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   +   T    A +LL Q  I  L+VVDD  + +G++   D+ + 
Sbjct: 156 TENLATVPLGTSQEEARKLLHQRRIEKLLVVDDGGRCVGLITVKDIEKA 204



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + +++  V +G    +A  +L ++R   + VVD+G +  G+IT  DI +   
Sbjct: 154 MTTENLATVPLGTSQEEARKLLHQRRIEKLLVVDDGGRCVGLITVKDIEKAVA 206


>gi|145225485|ref|YP_001136163.1| inositol-5-monophosphate dehydrogenase [Mycobacterium gilvum
           PYR-GCK]
 gi|315445838|ref|YP_004078717.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. Spyr1]
 gi|145217971|gb|ABP47375.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium gilvum
           PYR-GCK]
 gi|315264141|gb|ADU00883.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium sp. Spyr1]
          Length = 517

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 74/205 (36%), Gaps = 10/205 (4%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            I ++ +T ++  ++   +D++        +         P  S+ M       +AIA+ 
Sbjct: 23  KIAMLGLTFDDVLLLPAASDVIPATADTSSQLTRRIRLKVPLVSSAMDTVTESRMAIAMA 82

Query: 195 ESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            +        +   P   + G +                      L +   + +  R   
Sbjct: 83  RAGGMG--VLHRNLPVAEQAGQVETVKRSEAGMVTDPVTCSPENTLAEVDAMCARFRISG 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD+   L GIIT  D+     +   +  V +VM K P     E      A+ LLR++
Sbjct: 141 LPVVDDKGSLVGIITNRDMRFEVDQ---SKPVAEVMTKAPLITAQEGVSAEAALGLLRRN 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   K  G++   D ++
Sbjct: 198 KIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|297587731|ref|ZP_06946375.1| IMP dehydrogenase [Finegoldia magna ATCC 53516]
 gi|297574420|gb|EFH93140.1| IMP dehydrogenase [Finegoldia magna ATCC 53516]
          Length = 483

 Score =  100 bits (250), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + I  
Sbjct: 40  NIPMMSAGMDTVTESKMAIAMARQGGIG-----IIHKNMTIEEQAREVDRVKRSENGIIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     ++DA+ ++S  R   V +V++   L GI+T  D+   F KD   L + DV
Sbjct: 95  DPFYLSADDKIVDALKLMSHYRISGVPIVNDDMTLVGILTNRDVR--FVKD-EQLPIGDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M K N     E+  +  A++ +    I  L +VD+  K  G++   D
Sbjct: 152 MTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKD 198



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++        + +A+  +   +   + +VDE  KLKG+IT  D+ +   
Sbjct: 149 GDVMTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKDVEKTIQ 204


>gi|328880393|emb|CCA53632.1| hypothetical protein SVEN_0345 [Streptomyces venezuelae ATCC 10712]
          Length = 234

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G    +   +L E     V VVD+  +  G+++E D+ R         + E +M   
Sbjct: 17  VQPGTSFKEIARLLDEYGITAVPVVDDEHRPVGVVSEADLLRRHTAKDGPSTAEAMMSSP 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                       A +L+ +H +  L VVD   + IG++   DLL+ 
Sbjct: 77  VVTARPSWTAVEAARLMERHRVKRLPVVDADGRLIGVLSRSDLLQL 122



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   SV D+M      +   T      +LL ++ I+ + VVDD  + +G+V   DLLR
Sbjct: 1   MRHRSVADLMTPTAVAVQPGTSFKEIARLLDEYGITAVPVVDDEHRPVGVVSEADLLR 58



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/79 (16%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D    H      +              +   +     ++A  ++   R   + VVD 
Sbjct: 52  SEADLLRRHTAKDGPSTAEA-----MMSSPVVTARPSWTAVEAARLMERHRVKRLPVVDA 106

Query: 260 GQKLKGIITEGDIFRNFHK 278
             +L G+++  D+ + F +
Sbjct: 107 DGRLIGVLSRSDLLQLFLR 125


>gi|158333240|ref|YP_001514412.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158339481|ref|YP_001520658.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158303481|gb|ABW25098.1| CBS domain protein [Acaryochloris marina MBIC11017]
 gi|158309722|gb|ABW31339.1| CBS domain protein [Acaryochloris marina MBIC11017]
          Length = 163

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 57/152 (37%), Gaps = 28/152 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                       + D I  +     +   I ++ + R   + VVD    + GII+EGD+ 
Sbjct: 1   MAESHPVVKDFMTPDPIT-ISPTDSIERVIKLIEDHRISGMPVVDASNHVVGIISEGDLL 59

Query: 274 ------------------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAM 306
                                   + FH+ +     + V+DVM   P     D  LT A 
Sbjct: 60  VRESPMQPPLYMTLLGSVIYFESPKQFHQHMQKALGMLVQDVMTSQPITTKPDIPLTSAA 119

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+    I+ L VVD+ Q  IGI+   DL+R 
Sbjct: 120 NLMLSKKINRLPVVDNDQYLIGIITRHDLVRA 151



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                   K   PL  A  ++  K+   + VVD  Q L GIIT  D+ R  
Sbjct: 102 MTSQPITTKPDIPLTSAANLMLSKKINRLPVVDNDQYLIGIITRHDLVRAL 152


>gi|70606254|ref|YP_255124.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68566902|gb|AAY79831.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 135

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 37/107 (34%), Positives = 56/107 (52%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     + +   I++EK  G V V  E  K  GIITE DI R   K  N   + E++M  
Sbjct: 22  VDKKTKISEIAKIMTEKNIGSVIVT-ENNKPIGIITERDIVRAIGKGKNLESTAEEIMTV 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I ED+ +  A+ L+RQ NI  L V++D ++ +GI+   D+ R 
Sbjct: 81  SLITIREDSPIAGALSLMRQFNIRHLPVINDKRELVGILSIRDVARA 127



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      + + T ++   +++ + NI  ++V  +  K IGI+   D++R 
Sbjct: 11  VKEYMRSPVISVDKKTKISEIAKIMTEKNIGSVIVT-ENNKPIGIITERDIVRA 63



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 25/45 (55%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           ++   P+  A++++ +     + V+++ ++L GI++  D+ R   
Sbjct: 85  IREDSPIAGALSLMRQFNIRHLPVINDKRELVGILSIRDVARAID 129


>gi|14600580|ref|NP_147097.1| hypothetical protein APE_0267 [Aeropyrum pernix K1]
 gi|5103661|dbj|BAA79182.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 143

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 32/117 (27%), Positives = 62/117 (52%), Gaps = 2/117 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
                  +++G  + +A  +++E+  G + VVD+   +KGI+TE DI  +    K     
Sbjct: 19  MSTPPVTIEVGRSIAEAARLMAERGVGSLIVVDKQGLVKGILTERDIINSLASGKACAEG 78

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            VED+M +NP V   D  L + ++ +R  NI  + V+D+  + +G++   D++  G+
Sbjct: 79  KVEDIMSRNPIVASPDDDLEIIIEKMRDMNIRHIPVIDEDGRPLGMISVRDIIDLGV 135



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L  + VM   P  I     +  A +L+ +  +  L+VVD      GI+   D++
Sbjct: 12  RLKAKHVMSTPPVTIEVGRSIAEAARLMAERGVGSLIVVDKQGLVKGILTERDII 66


>gi|322378602|ref|ZP_08053040.1| inositol-5-monophosphate dehydrogenase [Helicobacter suis HS1]
 gi|322380106|ref|ZP_08054360.1| inositol-5-monophosphate dehydrogenase [Helicobacter suis HS5]
 gi|321147476|gb|EFX42122.1| inositol-5-monophosphate dehydrogenase [Helicobacter suis HS5]
 gi|321148962|gb|EFX43424.1| inositol-5-monophosphate dehydrogenase [Helicobacter suis HS1]
          Length = 481

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 70/188 (37%), Gaps = 11/188 (5%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPG 210
           +     +   L    +     +   ++A+  +     A+A+A L        +       
Sbjct: 23  LPQEVSVHSRLSVHID---LNIPFISAAMDTVTEYQSAIAMARLGGIGVIHKNMDTNSQV 79

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            ++  +    S V+H       +     L +A  I    +   V VVD+  +L GI+T  
Sbjct: 80  AQVLKVKKSESGVIH---DPIYIYADASLAEAKEITDNYKISGVPVVDKESRLIGILTNR 136

Query: 271 DIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D     VE+VM K P         L  A  ++ +H I  L +VD+     G+
Sbjct: 137 DLR--FETDWAK-KVEEVMTKAPLITAKAGVSLEQAQAIMHKHKIEKLPLVDENNILKGL 193

Query: 330 VHFLDLLR 337
           +   D+ +
Sbjct: 194 ITIKDIQK 201


>gi|227550623|ref|ZP_03980672.1| IMP dehydrogenase [Enterococcus faecium TX1330]
 gi|257888111|ref|ZP_05667764.1| IMP dehydrogenase [Enterococcus faecium 1,141,733]
 gi|257896270|ref|ZP_05675923.1| IMP dehydrogenase [Enterococcus faecium Com12]
 gi|293379351|ref|ZP_06625495.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium PC4.1]
 gi|293572971|ref|ZP_06683915.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E980]
 gi|227180243|gb|EEI61215.1| IMP dehydrogenase [Enterococcus faecium TX1330]
 gi|257824165|gb|EEV51097.1| IMP dehydrogenase [Enterococcus faecium 1,141,733]
 gi|257832835|gb|EEV59256.1| IMP dehydrogenase [Enterococcus faecium Com12]
 gi|291606957|gb|EFF36335.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E980]
 gi|292641874|gb|EFF60040.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium PC4.1]
          Length = 494

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPIISASMDTVTDSKMAIAMARQGGLG-----VIHKNMTISQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPQHLVADAEELMSKYRISGVPIVETLENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D + + + DVM K N       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 --FVTDYH-MPIADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++    +G  L DA  IL + +   + +VD   +L G+IT  DI +   
Sbjct: 156 ADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDIEKVIE 211


>gi|69247502|ref|ZP_00604372.1| IMP dehydrogenase [Enterococcus faecium DO]
 gi|257880563|ref|ZP_05660216.1| IMP dehydrogenase [Enterococcus faecium 1,230,933]
 gi|257881298|ref|ZP_05660951.1| IMP dehydrogenase [Enterococcus faecium 1,231,502]
 gi|257886407|ref|ZP_05666060.1| IMP dehydrogenase [Enterococcus faecium 1,231,501]
 gi|257890515|ref|ZP_05670168.1| IMP dehydrogenase [Enterococcus faecium 1,231,410]
 gi|257893091|ref|ZP_05672744.1| IMP dehydrogenase [Enterococcus faecium 1,231,408]
 gi|258615285|ref|ZP_05713055.1| inosine 5'-monophosphate dehydrogenase [Enterococcus faecium DO]
 gi|260558213|ref|ZP_05830409.1| IMP dehydrogenase [Enterococcus faecium C68]
 gi|261206903|ref|ZP_05921592.1| IMP dehydrogenase [Enterococcus faecium TC 6]
 gi|289567403|ref|ZP_06447769.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           D344SRF]
 gi|293563237|ref|ZP_06677689.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1162]
 gi|293569173|ref|ZP_06680479.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1071]
 gi|294616950|ref|ZP_06696673.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1636]
 gi|294618576|ref|ZP_06698133.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1679]
 gi|294623745|ref|ZP_06702573.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium U0317]
 gi|314940145|ref|ZP_07847325.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a04]
 gi|314943023|ref|ZP_07849827.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133C]
 gi|314948141|ref|ZP_07851537.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0082]
 gi|314953445|ref|ZP_07856363.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133A]
 gi|314993817|ref|ZP_07859153.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133B]
 gi|314998159|ref|ZP_07863041.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a01]
 gi|68194827|gb|EAN09302.1| IMP dehydrogenase [Enterococcus faecium DO]
 gi|257814791|gb|EEV43549.1| IMP dehydrogenase [Enterococcus faecium 1,230,933]
 gi|257816956|gb|EEV44284.1| IMP dehydrogenase [Enterococcus faecium 1,231,502]
 gi|257822263|gb|EEV49393.1| IMP dehydrogenase [Enterococcus faecium 1,231,501]
 gi|257826875|gb|EEV53501.1| IMP dehydrogenase [Enterococcus faecium 1,231,410]
 gi|257829470|gb|EEV56077.1| IMP dehydrogenase [Enterococcus faecium 1,231,408]
 gi|260075387|gb|EEW63693.1| IMP dehydrogenase [Enterococcus faecium C68]
 gi|260078531|gb|EEW66233.1| IMP dehydrogenase [Enterococcus faecium TC 6]
 gi|289160799|gb|EFD08733.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           D344SRF]
 gi|291588142|gb|EFF19984.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1071]
 gi|291590190|gb|EFF21976.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1636]
 gi|291595163|gb|EFF26499.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1679]
 gi|291596699|gb|EFF27922.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium U0317]
 gi|291604776|gb|EFF34258.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium E1162]
 gi|313587871|gb|EFR66716.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a01]
 gi|313591708|gb|EFR70553.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133B]
 gi|313594548|gb|EFR73393.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133A]
 gi|313598223|gb|EFR77068.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133C]
 gi|313640650|gb|EFS05230.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0133a04]
 gi|313645395|gb|EFS09975.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecium
           TX0082]
          Length = 494

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPIISASMDTVTDSKMAIAMARQGGLG-----VIHKNMTISQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPQHLVADAEELMSKYRISGVPIVETLENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D + + + DVM K N       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 --FVTDYH-MPIADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++    +G  L DA  IL + +   + +VD   +L G+IT  DI +   
Sbjct: 156 ADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDIEKVIE 211


>gi|206601591|gb|EDZ38074.1| Inosine-5'-monophosphate dehydrogenase [Leptospirillum sp. Group II
           '5-way CG']
          Length = 489

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 63/164 (38%), Gaps = 6/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIAL             L P  +   +                
Sbjct: 42  NIPIISSAMDTVTEARLAIALAREGGIGIIH-RALSPDEQAHEVDKVKKSESGMITDPIT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++    + +A+ I++  R   + V+ + +KL GI+T  D+      +     V DVM  +
Sbjct: 101 IRPDQTVREALNIMATYRISGIPVI-KNRKLVGIVTNRDLRFEMDGN---RKVSDVMTSR 156

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   T L  A +L ++H+I  L VVD+  +  G++   D+
Sbjct: 157 KLVTAPVGTTLEAAKELFQKHHIEKLPVVDENNELQGLITIKDI 200


>gi|116753344|ref|YP_842462.1| hypothetical protein Mthe_0019 [Methanosaeta thermophila PT]
 gi|116664795|gb|ABK13822.1| protein of unknown function DUF39 [Methanosaeta thermophila PT]
          Length = 503

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + +A  ++   RF  + VV +  KL GIIT  DI +    + N   V
Sbjct: 385 MNRDVVTVGENISVPEAARVIVGSRFDHLPVVSDDGKLMGIITTWDISKAVA-NGNISRV 443

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++M +       D  + +A + +  H+IS L VVD   + IG++   DL R 
Sbjct: 444 SEIMTRRVYTATPDEPIELAARTMDIHSISALPVVDKDNRVIGMITSNDLSRL 496



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 29/67 (43%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R   +      V DVM ++   + E+  +  A +++       L VV D  K +GI+ 
Sbjct: 368 VSRPMKQTKELPYVGDVMNRDVVTVGENISVPEAARVIVGSRFDHLPVVSDDGKLMGIIT 427

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 428 TWDISKA 434



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 20/52 (38%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               +       P+  A   +       + VVD+  ++ G+IT  D+ R F 
Sbjct: 447 MTRRVYTATPDEPIELAARTMDIHSISALPVVDKDNRVIGMITSNDLSRLFA 498


>gi|262197395|ref|YP_003268604.1| inosine-5'-monophosphate dehydrogenase [Haliangium ochraceum DSM
           14365]
 gi|262080742|gb|ACY16711.1| inosine-5'-monophosphate dehydrogenase [Haliangium ochraceum DSM
           14365]
          Length = 488

 Score =  100 bits (249), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 79/207 (38%), Gaps = 15/207 (7%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI--------MQLAIGDALAIALLE 195
           +  +     A   D VL LP E    P  +  +T           +  A  D +  +   
Sbjct: 1   MIGDKPLREALTFDDVLLLPAESRVLPRDVDVSTRLTTDIELGIPLVSAAMDTVTESATA 60

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRF 251
            R   E    ++H    +    +    V  +   I +    V     +  AI I+   R 
Sbjct: 61  IRMAREGGIGIVHKNLTVEEQALEVVRVKKAESGIVVDPVTVDPERTVEGAIEIMRTHRI 120

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
             + VVD   +  GI+T  D+   F ++L+   V +VM K    + E   L  + +LL +
Sbjct: 121 SGLPVVDGEGRPLGILTNRDVR--FERNLDQ-RVGEVMTKRLITVREGVSLEESKELLHE 177

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + I  L+VVD   +  G++   D+ + 
Sbjct: 178 NRIEKLLVVDAEGRLRGLITIKDIEQA 204


>gi|297521346|ref|ZP_06939732.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 79

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 3/79 (3%)

Query: 265 GIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI T+GD+ R F    D+  LS+ DVM      +    L   A+ L++  +I+ +MV D 
Sbjct: 2   GIFTDGDLRRVFDMGVDVRQLSIADVMTPGGIRVRPGILAVEALNLMQSRHITSVMVADG 61

Query: 323 CQKAIGIVHFLDLLRFGII 341
               +G++H  DLLR G++
Sbjct: 62  D-HLLGVLHMHDLLRAGVV 79


>gi|254413927|ref|ZP_05027696.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
           [Microcoleus chthonoplastes PCC 7420]
 gi|196179524|gb|EDX74519.1| tRNA nucleotidyltransferase/poly(A) polymerase family protein
           [Microcoleus chthonoplastes PCC 7420]
          Length = 926

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 1/117 (0%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           S +      +  ++    + +A  IL       ++VVDE  +L GII+  DI    H  L
Sbjct: 339 SALELMSSPVRTIRPDTTVGEAQRILLRYGHSGLSVVDEHDQLIGIISRRDIDLALHHGL 398

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               V+  M +N K I   T L     L+  ++I  L V+ +  + +GIV   D+LR
Sbjct: 399 GHAPVKGYMTRNLKTITPQTSLPEIESLMVTYDIGRLPVL-ENGQLVGIVTRTDVLR 454



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           LS  ++M    + I  DT +  A ++L ++  S L VVD+  + IGI+   D+
Sbjct: 338 LSALELMSSPVRTIRPDTTVGEAQRILLRYGHSGLSVVDEHDQLIGIISRRDI 390



 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            A    +   ++  +     L +  +++     G + V+ E  +L GI+T  D+ R   +
Sbjct: 400 HAPVKGYMTRNLKTITPQTSLPEIESLMVTYDIGRLPVL-ENGQLVGIVTRTDVLRQVRQ 458

Query: 279 DLNTL 283
           D    
Sbjct: 459 DQERW 463


>gi|256810527|ref|YP_003127896.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793727|gb|ACV24396.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 297

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L +A  + +EK      VVD    L GII+  DI  N         V++VM KN 
Sbjct: 184 NPDNTLKEAAKLFAEKNISGAPVVDNDN-LIGIISLHDIAENIEN--VDRKVKEVMNKNV 240

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I +D  +  A++++ ++N+  L++VDD  K +GI+   D+L+ 
Sbjct: 241 LTIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDILKI 285



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 271 DIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           DI R    D      +  + V +V I+    +  D  L  A +L  + NIS   VVD+  
Sbjct: 152 DIHRILLIDVLGVSSIPNVKVGEVGIQKVYTLNPDNTLKEAAKLFAEKNISGAPVVDNDN 211

Query: 325 KAIGIVHFLDL 335
             IGI+   D+
Sbjct: 212 -LIGIISLHDI 221



 Score = 46.4 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     + DA+ I+++   G + +VD+  K+ GIIT  DI +  
Sbjct: 243 IHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDILKII 286


>gi|120402520|ref|YP_952349.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
           PYR-1]
 gi|119955338|gb|ABM12343.1| inosine-5'-monophosphate dehydrogenase [Mycobacterium vanbaalenii
           PYR-1]
          Length = 517

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIP 231
             P  S+ M       +AIA+  +        +   P   + G +               
Sbjct: 61  KVPLVSSAMDTVTESRMAIAMARAGGMG--VLHRNLPVAEQAGQVETVKRSEAGMVTDPV 118

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
                  L +   + +  R   + VVD+   L GIIT  D+   F  DL+   V +VM K
Sbjct: 119 TCSPDNTLAEVDAMCARFRISGLPVVDDRGSLVGIITNRDMR--FEVDLSK-PVSEVMTK 175

Query: 292 NP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P     E      A+ LLR++ I  L +VD   K  G++   D ++
Sbjct: 176 APLITAQEGVSAEAALGLLRRNKIEKLPIVDGHGKLTGLITVKDFVK 222


>gi|296134271|ref|YP_003641518.1| Nucleotidyl transferase [Thermincola sp. JR]
 gi|296032849|gb|ADG83617.1| Nucleotidyl transferase [Thermincola potens JR]
          Length = 355

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LVK   PL +++  + +     + VVD+  ++ G++T+GDI R    +++    +  VM 
Sbjct: 9   LVKADLPLRESLRQMDKGARQLLIVVDDDNRILGVVTDGDIRRAIINNIDFEAPIGQVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            NP  +        A++++R+ +I  + VV++  + + I+ + +LL  G
Sbjct: 69  PNPITLGCPVNHKKALKIMRERSIKHIPVVNEDGQVVDILIWSNLLGKG 117


>gi|218888209|ref|YP_002437530.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218759163|gb|ACL10062.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 486

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  +         V+H    +    +    V  S   + +
Sbjct: 41  NIPLLSAAMDTVTDSGMAISMARNGGVG-----VIHKNMPVDRQRIEVEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ +++E R   + VV  G +L GI+T  D+   F KDL    V +V
Sbjct: 96  DPVTIDPDYSVRQALELMAEYRVSGLPVV-RGVELVGILTNRDVR--FVKDLEGTQVREV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN   +   T L  A  LL  H I  L+VVD+  +  G++   D+
Sbjct: 153 MTSKNLVTVPVGTTLDEAKDLLHAHRIEKLLVVDEGNRLKGLITMKDI 200


>gi|7007417|dbj|BAA90835.1| GuaB [Bacillus halodurans]
          Length = 281

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 70/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAKMAIAIAREGGLG-----IIHKNMSVEEQAEQVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE QKL GI+T  D+   F +D +TL ++DV
Sbjct: 98  NPFFLTPDRQVFDAEHLMGKYRISGVPIVDEDQKLVGILTNRDLR--FIEDYSTL-IDDV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 155 MTKENLVTAPVGTTLKEAEEILQKHKIEKLPLVDESGTLKGLITIKDI 202


>gi|313639393|gb|EFS04268.1| SIS domain-containing protein [Listeria seeligeri FSL S4-171]
          Length = 110

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + ++    +   E   +  L               VEKI    G++V++G G SG 
Sbjct: 1   MDKQAILENIHSTWREEAEAILRLPEVTNEN---ALIETVEKIANCTGKIVVSGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
              KL  +      P+ F+  ++A HG LG++ +DD++I++S  G++ EL  +
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQQDDILILISKGGNTGELLNL 110


>gi|170086117|ref|XP_001874282.1| predicted protein [Laccaria bicolor S238N-H82]
 gi|164651834|gb|EDR16074.1| predicted protein [Laccaria bicolor S238N-H82]
          Length = 700

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     + +A  + + KR  CV VVD+ + L GI T  D+         D +T  V  +M
Sbjct: 96  VPENITVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVSQIM 155

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP V  + T  T A+QL+   +   L V ++    +G++   D+ +
Sbjct: 156 TRNPMVTRDSTSATEALQLMVSRHFRHLPVCNEDGNVVGLL---DITK 200



 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 16/130 (12%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----------KLKGIITEGD 271
            VM S      V     + +   ++ E+R   V V++             ++ GI T  D
Sbjct: 261 TVMDSRTQPATVGPKTTVREVAKLMKERRTTAVCVMETAGPASPGLPAGSRIAGIFTSKD 320

Query: 272 I-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  R     L+    SV  VM  +P        +  A++ +   +   L V+++  + + 
Sbjct: 321 VVLRVIAAGLDAGRCSVVRVMTPHPDTAPPTMSVHDALKKMHNGHYLNLPVIEEDGRLVA 380

Query: 329 IVHFLDLLRF 338
           IV   D+L+ 
Sbjct: 381 IV---DVLKL 387



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 24/198 (12%), Positives = 55/198 (27%), Gaps = 65/198 (32%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D         L       S +M     +          +A+ ++  + F  + V +
Sbjct: 130 FTAKDLAYRVTAEGLDPHTTPVSQIMTRNPMVTRDS--TSATEALQLMVSRHFRHLPVCN 187

Query: 259 EGQKLKGIITEGDIFRNFHKDL----NTLSVED--------------------------- 287
           E   + G++   DI + FH+ L     + +  +                           
Sbjct: 188 EDGNVVGLL---DITKVFHEALGKVERSSAASEQLFSAMAGVQSELGGAVGSNPQAAAML 244

Query: 288 -----------------VM--IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---- 324
                            VM     P  +   T +    +L+++   + + V++       
Sbjct: 245 AWAEKLREKTALPDLTTVMDSRTQPATVGPKTTVREVAKLMKERRTTAVCVMETAGPASP 304

Query: 325 ------KAIGIVHFLDLL 336
                 +  GI    D++
Sbjct: 305 GLPAGSRIAGIFTSKDVV 322


>gi|167630470|ref|YP_001680969.1| inosine-5'-monophosphate dehydrogenase [Heliobacterium
           modesticaldum Ice1]
 gi|167593210|gb|ABZ84958.1| inosine-5'-monophosphate dehydrogenase [Heliobacterium
           modesticaldum Ice1]
          Length = 485

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 43  NIPIMSAGMDTVTDSRMAIAMAREGGIG-----VIHKNMTIDQQAHEVDRVKRSEHGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+       V + DE  KL GI+T  D+    + D+    +  V
Sbjct: 98  DPIYLSPQHKVTDALAIMERYHISGVPIADEEGKLVGILTNRDLRFETNFDI---PIATV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A ++LR H +  L +VD+     G++   D+ + 
Sbjct: 155 MTKDNLVTAPVGTSLAEAKEILRLHKVEKLPIVDNEGHLKGLITIKDIQKA 205


>gi|187776787|ref|ZP_02993260.1| hypothetical protein CLOSPO_00303 [Clostridium sporogenes ATCC
           15579]
 gi|187775446|gb|EDU39248.1| hypothetical protein CLOSPO_00303 [Clostridium sporogenes ATCC
           15579]
          Length = 484

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 66/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQAGEVDKVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +G+KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPDNTIQDALNLMSRYRISGVPIT-KGEKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIEEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|262197635|ref|YP_003268844.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
           14365]
 gi|262080982|gb|ACY16951.1| CBS domain containing membrane protein [Haliangium ochraceum DSM
           14365]
          Length = 640

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 14/201 (6%)

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           I I  E        A  VL    E  +         S   ++ +         ++R   E
Sbjct: 433 IGIMEERIKSRRTGAQWVLRSLSEMGADSTRDIRERSVTAEMLMRQ------QQNRPVHE 486

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            D+  L                  S D    V     +  A +++  +    V V D+  
Sbjct: 487 WDYGQLRSDDDWRRHGYRTVGQFMSTDLFT-VHPEDLVDLAASVMDWEHIRHVPVEDDHG 545

Query: 262 KLKGIITEGDIFRNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
            L GIIT   + R   +    L+      V D+M   P  +  DTL   A++++R+  I 
Sbjct: 546 SLVGIITHRTLLRLMARRGTNLAASSPVAVRDIMRVAPVTVSPDTLTIDAIRMMREQKIG 605

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            L VVD   K +GI+   DLL
Sbjct: 606 CLPVVDGD-KLVGIITESDLL 625



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           ++ D  R+ ++     +V   M  +   +  + L+ +A  ++   +I  + V DD    +
Sbjct: 494 SDDDWRRHGYR-----TVGQFMSTDLFTVHPEDLVDLAASVMDWEHIRHVPVEDDHGSLV 548

Query: 328 GIVHFLDLLRF 338
           GI+    LLR 
Sbjct: 549 GIITHRTLLRL 559


>gi|88603447|ref|YP_503625.1| homoserine O-acetyltransferase [Methanospirillum hungatei JF-1]
 gi|88188909|gb|ABD41906.1| homoserine O-acetyltransferase [Methanospirillum hungatei JF-1]
          Length = 490

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 65/144 (45%), Gaps = 5/144 (3%)

Query: 191 IALLESRNFSENDFYVLHPGGKL---GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           +   E R+   +D ++L  G      G      +       S+P V+    +  A  ++ 
Sbjct: 337 VEYCEIRSNYGHDAFLLESGQMNYLLGRFLSHLTVSDLMIRSVPTVRETVTIKGAAALMI 396

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            +    + +V    +L GI+T  DI R+  +D+ TL  ED+M +          ++ A+ 
Sbjct: 397 AEAVNHLPIVSSDGRLVGIVTSWDISRSVAQDVKTL--EDIMTRTVLTATPGEHISKAVN 454

Query: 308 LLRQHNISVLMVVDDCQKAIGIVH 331
            ++++ IS L VVD+  + +GI+ 
Sbjct: 455 RMQKNRISALPVVDEENRVVGIIT 478



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 33/68 (48%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +     + L+ L+V D+MI++   + E   +  A  L+    ++ L +V    + +GI
Sbjct: 356 GQMNYLLGRFLSHLTVSDLMIRSVPTVRETVTIKGAAALMIAEAVNHLPIVSSDGRLVGI 415

Query: 330 VHFLDLLR 337
           V   D+ R
Sbjct: 416 VTSWDISR 423



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            G  +  A+  + + R   + VVDE  ++ GIIT   + R   +
Sbjct: 445 PGEHISKAVNRMQKNRISALPVVDEENRVVGIITAERLSRLVVR 488


>gi|77359543|ref|YP_339118.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase)
           [Pseudoalteromonas haloplanktis TAC125]
 gi|76874454|emb|CAI85675.1| conserved protein of unknown function ; putative
           inosine-5'-monophosphate dehydrogenase (IMP
           dehydrogenase) [Pseudoalteromonas haloplanktis TAC125]
          Length = 612

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKN 292
               +  A   + E     + +  +   L G++T+ D+  R    +++   SV  +M   
Sbjct: 164 PDSSIRHAAKQMQEYGVSSIMITQDA-HLVGVVTDRDLRNRVLADEVDPQQSVSSIMTAK 222

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           PK I E+  +  A+ L+ +HNI  + V+D+  K +G++   DLLR
Sbjct: 223 PKFIFENNRVFSALHLMLKHNIHHIPVLDENHKPLGMITSTDLLR 267



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + ++M +    +  D+ +  A + ++++ +S +M+  D    +G+V   DL
Sbjct: 146 WSERKISELMTRKAITLTPDSSIRHAAKQMQEYGVSSIMITQDA-HLVGVVTDRDL 200



 Score = 39.1 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 20/49 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +     +  A+ ++ +     + V+DE  K  G+IT  D+ R
Sbjct: 219 MTAKPKFIFENNRVFSALHLMLKHNIHHIPVLDENHKPLGMITSTDLLR 267


>gi|257899257|ref|ZP_05678910.1| IMP dehydrogenase [Enterococcus faecium Com15]
 gi|257837169|gb|EEV62243.1| IMP dehydrogenase [Enterococcus faecium Com15]
          Length = 494

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPIISASMDTVTDSKMAIAMARQGGLG-----VIHKNMTISQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPQNLVADAEELMSKYRISGVPIVETLENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D + + + DVM K N       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 --FVTDYH-MPIADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++    +G  L DA  IL + +   + +VD   +L G+IT  DI +   
Sbjct: 156 ADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDIEKVIE 211


>gi|81299785|ref|YP_399993.1| CBS [Synechococcus elongatus PCC 7942]
 gi|81168666|gb|ABB57006.1| CBS [Synechococcus elongatus PCC 7942]
          Length = 909

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    + +A  IL       ++VVDE  +L GII+  D+    H       V
Sbjct: 321 MSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDLDLALHHGFGHAPV 380

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  +PK I  +T L     L+  ++I  L V+D   + +GIV   D+LR
Sbjct: 381 KGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLD-RNQLVGIVTRTDVLR 431



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D+M    + +  +  +  A ++L ++  S L VVD+  + +GI+   DL
Sbjct: 317 ARDLMSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDL 367



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +       +     L +   ++     G + V+D   +L GI+T  D
Sbjct: 370 ALHHGFGHAPVKGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLDRN-QLVGIVTRTD 428

Query: 272 IFRNFHKDLNTLS 284
           + R  H+D    +
Sbjct: 429 VLRQLHQDQQRQT 441


>gi|56750577|ref|YP_171278.1| polyA polymerase [Synechococcus elongatus PCC 6301]
 gi|56685536|dbj|BAD78758.1| similar to polyA polymerase [Synechococcus elongatus PCC 6301]
          Length = 909

 Score =  100 bits (249), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    + +A  IL       ++VVDE  +L GII+  D+    H       V
Sbjct: 321 MSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDLDLALHHGFGHAPV 380

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  +PK I  +T L     L+  ++I  L V+D   + +GIV   D+LR
Sbjct: 381 KGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLD-RNQLVGIVTRTDVLR 431



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D+M    + +  +  +  A ++L ++  S L VVD+  + +GI+   DL
Sbjct: 317 ARDLMSSPVRTVRPEIAIAEAERILLRYGHSGLSVVDEQDQLVGIISRRDL 367



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +       +     L +   ++     G + V+D   +L GI+T  D
Sbjct: 370 ALHHGFGHAPVKGYMTLHPKTIAPETSLPEIEDLMVTYDIGRLPVLDRN-QLVGIVTRTD 428

Query: 272 IFRNFHKDLNTLS 284
           + R  H+D    +
Sbjct: 429 VLRQLHQDQQRQT 441


>gi|56961793|ref|YP_173515.1| inosine 5'-monophosphate dehydrogenase [Bacillus clausii KSM-K16]
 gi|56908027|dbj|BAD62554.1| inosine-5'-monophosphate dehydrogenase [Bacillus clausii KSM-K16]
          Length = 485

 Score =   99 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPILSAGMDTVTESEMAIAIAREGGIG-----IIHKNMSIEEQAEQIDKVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE QKL GI+T  D+   F +D  ++ ++DV
Sbjct: 98  DPFFLTPDRQVFDAEHLMGKYRISGVPIVDEEQKLVGILTNRDLR--FIED-YSIKIDDV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K   V     T L  A ++L+QH I  L +VDD     G++   D+
Sbjct: 155 MTKEGLVTAPVGTTLEQAEKILQQHKIEKLPLVDDNGILKGLITIKDI 202


>gi|296109539|ref|YP_003616488.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295434353|gb|ADG13524.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 184

 Score =   99 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             + V           +  V     + DA  I+ EK  G V VV E +K  GI+TE DI 
Sbjct: 1   MNVNVEIPVYEVMSVPVYTVSKKDTVYDAANIMCEKDIGAVVVV-ENKKPVGILTERDIL 59

Query: 274 RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +             VE+VM KN   I ++T LT A +++ +HN+  L VV +  + +GI+
Sbjct: 60  KKVVAKNLKPKEVLVEEVMTKNIITIPKNTTLTEAAKIMSKHNVKRLPVV-ENNEVVGII 118

Query: 331 HFLDLLR 337
              D++R
Sbjct: 119 TQDDIVR 125


>gi|148655860|ref|YP_001276065.1| signal-transduction protein [Roseiflexus sp. RS-1]
 gi|148567970|gb|ABQ90115.1| putative signal-transduction protein with CBS domains [Roseiflexus
           sp. RS-1]
          Length = 155

 Score =   99 bits (248), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 9/143 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
               P G+  T              +   ++  P+ +AI ++ + R   + VVD    L 
Sbjct: 6   RQRQPCGERETHVEHKRVSDVMHYGVISCRVETPVEEAIELMQKHRIHALVVVDGPGYLA 65

Query: 265 GIITEGDIFRNFH-----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           GI+++ D+ R +      +++    V ++M ++    + +  L  A+QLL +++I  L+V
Sbjct: 66  GIVSQTDLLRAWKEGSSFENVMRGPVGEIMTRSVITCMPEMELERAIQLLNRNHIHRLVV 125

Query: 320 VDD--CQK--AIGIVHFLDLLRF 338
           V++    +   +GI+   D++R 
Sbjct: 126 VEERNDGRFWPVGILSMTDIVRA 148


>gi|119484314|ref|ZP_01618931.1| Phosphoesterase, RecJ-like protein [Lyngbya sp. PCC 8106]
 gi|119457788|gb|EAW38911.1| Phosphoesterase, RecJ-like protein [Lyngbya sp. PCC 8106]
          Length = 928

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++VVDE  +L GII+  D+    H   +   V
Sbjct: 330 MSSPVRTIRPETTIAEAHRILLRYGHSGLSVVDEQDQLVGIISRRDLDIALHHGFSHAPV 389

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M    K I   T L     L+  ++I  L V+D     +GIV   D+LR 
Sbjct: 390 KGYMTPQLKTITPHTTLHEIESLMVTYDIGRLPVLDGNN-LVGIVTRTDVLRL 441



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 272 IFRNFHKDLNTLSVE-DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           I   F   +    V  ++M    + I  +T +  A ++L ++  S L VVD+  + +GI+
Sbjct: 312 IVEEFKTQIPHPPVARELMSSPVRTIRPETTIAEAHRILLRYGHSGLSVVDEQDQLVGII 371

Query: 331 HFLDL 335
              DL
Sbjct: 372 SRRDL 376



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L +  +++     G + V+D    L GI+T  D
Sbjct: 379 ALHHGFSHAPVKGYMTPQLKTITPHTTLHEIESLMVTYDIGRLPVLDGNN-LVGIVTRTD 437

Query: 272 IFRNFHK 278
           + R  H+
Sbjct: 438 VLRLLHQ 444


>gi|289580334|ref|YP_003478800.1| inosine-5'-monophosphate dehydrogenase [Natrialba magadii ATCC
           43099]
 gi|289529887|gb|ADD04238.1| inosine-5'-monophosphate dehydrogenase [Natrialba magadii ATCC
           43099]
          Length = 500

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM------HS 226
             P  SA M       +AIA+            VLH    +  +      V         
Sbjct: 53  SVPILSAAMDTVTESDMAIAMARHGGLG-----VLHRNMNIDEMVEEIDRVKSADELVIP 107

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            DS+        + +   +++ +  G   VV+   ++ GII+  DI  +   + +   V 
Sbjct: 108 FDSVVTADPEMSVREVDDLMARQGVGGAPVVNTNGEVLGIISSTDIRPHLEVNEDD-PVT 166

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M        ED     A  L+ +H I  + VVDD    +G+V    +L+
Sbjct: 167 EAMTDEVITAPEDINARDAFDLMYEHKIERIPVVDDENLLVGLVTMQGILQ 217


>gi|310780553|ref|YP_003968885.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
           2926]
 gi|309749876|gb|ADO84537.1| inosine-5'-monophosphate dehydrogenase [Ilyobacter polytropus DSM
           2926]
          Length = 487

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 43/166 (25%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++      
Sbjct: 43  NVPILSAAMDTVTEAKLAIALARQGGLGFIHKNMAIEEQAAEIDKVKRNESGMI---TDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L DA  I+++ R   + VV+    L GIIT  D+   + KDL+   VE +M 
Sbjct: 100 ITLNRESTLADADGIMAKYRISGLPVVESDGTLVGIITNRDLK--YRKDLDE-KVETIMT 156

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A ++L ++ I  L +VD+  K +G++   D+
Sbjct: 157 KENLITASVGTTLEEAKEILLENRIEKLPIVDENSKLMGLITIKDI 202


>gi|296108947|ref|YP_003615896.1| protein of unknown function DUF39 [Methanocaldococcus infernus ME]
 gi|295433761|gb|ADG12932.1| protein of unknown function DUF39 [Methanocaldococcus infernus ME]
          Length = 507

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                + K+G  + +A  IL       + +VDE  K+ GI+T  DI +   +      +E
Sbjct: 393 KREPIVAKLGISIEEAAKILMNNNINHLPIVDEHGKIVGIVTSWDIAKAVAE--KKRKIE 450

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M +N     +D  +    + + +++IS L V+D+  + +G+V   DL R 
Sbjct: 451 EIMTRNVVTARKDEPIDEVARKMCRYDISGLPVIDENNRVVGVVTSEDLSRL 502



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DV+ + P V      +  A ++L  +NI+ L +VD+  K +GIV   D+ + 
Sbjct: 388 VRDVIKREPIVAKLGISIEEAAKILMNNNINHLPIVDEHGKIVGIVTSWDIAKA 441



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/68 (13%), Positives = 23/68 (33%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +        ++M         +   P+ +    +       + V+DE  ++ G++T 
Sbjct: 439 AKAVAEKKRKIEEIMTRNVVTA--RKDEPIDEVARKMCRYDISGLPVIDENNRVVGVVTS 496

Query: 270 GDIFRNFH 277
            D+ R   
Sbjct: 497 EDLSRLLG 504


>gi|227499358|ref|ZP_03929469.1| IMP dehydrogenase [Anaerococcus tetradius ATCC 35098]
 gi|227218562|gb|EEI83802.1| IMP dehydrogenase [Anaerococcus tetradius ATCC 35098]
          Length = 483

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/165 (24%), Positives = 67/165 (40%), Gaps = 7/165 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+           +   P  +            H   + P 
Sbjct: 40  NIPMMSAGMDTVTESQMAIAMARQGGIGI--IHKNMPIAEQARQVDLVKRSEHGVITDPF 97

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            +     L DA+ I+   R   V +VD+   LKGI+T  D+   F +D   L ++ +M K
Sbjct: 98  YLHPDNILQDALDIMKNYRISGVPIVDKEMYLKGILTNRDVR--FEEDPKVL-IDTIMTK 154

Query: 292 NPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  V+  E   +  A+ L+ +  I  L +VD+  K  G++   D+
Sbjct: 155 DNLVVGYEGIKMKEAISLMEKSKIEKLPIVDEDNKLKGLITIKDI 199


>gi|256810321|ref|YP_003127690.1| protein of unknown function DUF39 [Methanocaldococcus fervens AG86]
 gi|256793521|gb|ACV24190.1| protein of unknown function DUF39 [Methanocaldococcus fervens AG86]
          Length = 507

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              +++A  IL +     + +VDE  +L GIIT  DI +   +  N  ++E++M +N   
Sbjct: 402 NISIMEAAKILIKHNINHLPIVDEQGRLVGIITSWDIAKALAQ--NKKTIEEIMTRNVVT 459

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ED  +      + ++NIS + VVD+ ++ +G+V   D+ R 
Sbjct: 460 AYEDEPVDHVAVKMSKYNISGVPVVDNYRRVVGVVTSEDISRL 502



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D++ K P     +  +  A ++L +HNI+ L +VD+  + +GI+   D+ + 
Sbjct: 388 VRDILSKPPITAQRNISIMEAAKILIKHNINHLPIVDEQGRLVGIITSWDIAKA 441



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 24/68 (35%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P+      +S+     V VVD  +++ G++T 
Sbjct: 439 AKALAQNKKTIEEIMTRNVVTA--YEDEPVDHVAVKMSKYNISGVPVVDNYRRVVGVVTS 496

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 497 EDISRLFG 504


>gi|284033897|ref|YP_003383828.1| inosine-5'-monophosphate dehydrogenase [Kribbella flavida DSM
           17836]
 gi|283813190|gb|ADB35029.1| inosine-5'-monophosphate dehydrogenase [Kribbella flavida DSM
           17836]
          Length = 504

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 64/173 (36%), Gaps = 19/173 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIA+          RN S  D        +   + +       
Sbjct: 49  NIPLLSSAMDTVTEARMAIAMARQGGLGVLHRNLSIED--------QAQQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     + +A  +  + R   V VVD    L GI+T  D+   F  DL+   V
Sbjct: 101 MIAQPITIGPDATIGEADALCGQYRISGVPVVDAAGVLVGIVTNRDMR--FENDLSR-PV 157

Query: 286 EDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM K P     +      AM LL +H +  L +VD+  K  G++   D ++
Sbjct: 158 REVMTKQPLITGKQGISADDAMALLSKHKVEKLPLVDEAGKLTGLITLKDFVK 210


>gi|218248479|ref|YP_002373850.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8801]
 gi|218168957|gb|ACK67694.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8801]
          Length = 903

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       ++VV+E   L GII+  D+    H   +   V
Sbjct: 325 MSSPVRTIRPETTIEQAQRVLFRYGHSGLSVVNENDILVGIISRRDLDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M ++ K I  +TLL     ++  ++I  L VV +  K +GIV   DLLR
Sbjct: 385 KGYMTRHLKTITPETLLPEIESIMVTYDIGRLPVV-EGDKLLGIVTRTDLLR 435



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + I  +T +  A ++L ++  S L VV++    +GI+   DL
Sbjct: 319 LTARDLMSSPVRTIRPETTIEQAQRVLFRYGHSGLSVVNENDILVGIISRRDL 371



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L +  +I+     G + VV EG KL GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMTRHLKTITPETLLPEIESIMVTYDIGRLPVV-EGDKLLGIVTRTD 432

Query: 272 IFRNFHKD 279
           + R  H++
Sbjct: 433 LLRQIHQN 440


>gi|88603870|ref|YP_504048.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei
           JF-1]
 gi|88189332|gb|ABD42329.1| inosine-5'-monophosphate dehydrogenase [Methanospirillum hungatei
           JF-1]
          Length = 486

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 11/168 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++A+AL  +   +     V+H              V H  + I  
Sbjct: 44  NIPLVSAAMDTVSTSSMAVALARAGGIT-----VIHRNMTPEQEAEEVRKVKHESEIIQR 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D   +++    G V VV E  K+ GI++  D+ R     +    V+ +
Sbjct: 99  EVLTVTPDSLIADVDRMMTYHGIGGVPVV-EDGKVIGIVSRRDL-RAMVSRIGNQPVKSI 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M   P V  E   +  A  L+    +  L VVD      GI+   +LL
Sbjct: 157 MTHEPIVAKEGISIDDAFDLMYSRKVERLPVVDSEGILTGIISMQELL 204


>gi|220905178|ref|YP_002480490.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869477|gb|ACL49812.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 219

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 12/118 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     L+    ++ +     + V+D+  ++ GII++ D+                H  L
Sbjct: 14  VTPETSLLKVGKLMKDHHVRRLPVLDDKGRVVGIISDRDVRDASPSKATTLDMYEMHYLL 73

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L  +++M  NP  +     +  A  ++  + I  L VV+D  K +GI+   D+ + 
Sbjct: 74  AELKAKNIMTANPMTVKPSDTVEQAALIMLDNKIGGLPVVEDSGKLVGIISDHDVFKA 131



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + V++ M  +   +  +T L    +L++ H++  L V+DD  + +GI+   D
Sbjct: 1   MPVQNWMTTDVVSVTPETSLLKVGKLMKDHHVRRLPVLDDKGRVVGIISDRD 52



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    +  A  I+ + + G + VV++  KL GII++ D+F+  
Sbjct: 89  VKPSDTVEQAALIMLDNKIGGLPVVEDSGKLVGIISDHDVFKAL 132


>gi|332296074|ref|YP_004437997.1| CBS domain containing protein [Thermodesulfobium narugense DSM
           14796]
 gi|332179177|gb|AEE14866.1| CBS domain containing protein [Thermodesulfobium narugense DSM
           14796]
          Length = 867

 Score =   99 bits (248), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 56/135 (41%), Gaps = 1/135 (0%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF                         + ++     + +A  IL       V ++ +G +
Sbjct: 296 DFLDRLRSAIQKECKPKVRVKDVMTSPVRVLSPETSVEEARKILLRYGHSGVPIL-KGDE 354

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + G+++  DI +     L  + V+ +M +N   I +D  L  A +L+ +  I  L VV++
Sbjct: 355 IVGVLSRKDIDKATQHRLGQIEVQKIMSRNVITINQDASLDEAQKLMIEKEIGRLPVVNE 414

Query: 323 CQKAIGIVHFLDLLR 337
             K +G++   D+LR
Sbjct: 415 KNKLVGLITRTDILR 429



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 33/84 (39%), Gaps = 1/84 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                             ++  +     L +A  ++ EK  G + VV+E  KL G+IT  
Sbjct: 366 KATQHRLGQIEVQKIMSRNVITINQDASLDEAQKLMIEKEIGRLPVVNEKNKLVGLITRT 425

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPK 294
           DI R +H  +N    +++  K   
Sbjct: 426 DILRVWH-GINIKKTKELSTKRVI 448



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 33/68 (48%), Gaps = 2/68 (2%)

Query: 272 IFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +     K+    + V+DVM    +V+  +T +  A ++L ++  S + ++    + +G++
Sbjct: 301 LRSAIQKECKPKVRVKDVMTSPVRVLSPETSVEEARKILLRYGHSGVPIL-KGDEIVGVL 359

Query: 331 HFLDLLRF 338
              D+ + 
Sbjct: 360 SRKDIDKA 367


>gi|282162802|ref|YP_003355187.1| hypothetical protein MCP_0132 [Methanocella paludicola SANAE]
 gi|282155116|dbj|BAI60204.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 501

 Score = 99.6 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 9/164 (5%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD--------VMHSG 227
                   +   A  +A        +  F++  P   +                 +    
Sbjct: 325 EVRTSSLSSFYKARQVASELKAQIKKGKFFLSLPAQTIQAQGSSKPMKQTLEMPLIKDVM 384

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +  + +G  + +A   + + +F  + VVDE  +L GI+T  D+ +      +      
Sbjct: 385 APVATITLGFSVHEAAKKIIQDKFNHLPVVDENSRLVGIVTSWDVSKALALSKSDKLAP- 443

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +M +N   +  D    +A++LL +HNIS L V+D  +K +GIV 
Sbjct: 444 IMTRNVITVAPDDPADLAVRLLEKHNISALPVIDKDKKVLGIVT 487



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 285 VEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++DVM   P   I     +  A + + Q   + L VVD+  + +GIV   D+ + 
Sbjct: 380 IKDVM--APVATITLGFSVHEAAKKIIQDKFNHLPVVDENSRLVGIVTSWDVSKA 432


>gi|126657310|ref|ZP_01728469.1| polyA polymerase [Cyanothece sp. CCY0110]
 gi|126621297|gb|EAZ92009.1| polyA polymerase [Cyanothece sp. CCY0110]
          Length = 905

 Score = 99.6 bits (247), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       ++VVDE   L G+I+  D+    H   +   V
Sbjct: 325 MSSPVRTIRPETTIEQAERVLFRYGHSGLSVVDENDHLVGVISRRDLDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M KN K I  DTLL     ++  +++  L V+D+  K +GIV   DLLR
Sbjct: 385 KGYMSKNLKTIDPDTLLPDIESIMVTYDVGRLPVIDN-NKLLGIVTRTDLLR 435



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + I  +T +  A ++L ++  S L VVD+    +G++   DL
Sbjct: 319 LTARDLMSSPVRTIRPETTIEQAERVLFRYGHSGLSVVDENDHLVGVISRRDL 371



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 7/83 (8%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   ++  +     L D  +I+     G + V+D   KL GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMSKNLKTIDPDTLLPDIESIMVTYDVGRLPVID-NNKLLGIVTRTD 432

Query: 272 IFRNFH------KDLNTLSVEDV 288
           + R  H      KD N   V  V
Sbjct: 433 LLRQIHQQRKEVKDENGKKVATV 455


>gi|317487336|ref|ZP_07946130.1| inosine-5'-monophosphate dehydrogenase [Bilophila wadsworthia
           3_1_6]
 gi|316921435|gb|EFV42727.1| inosine-5'-monophosphate dehydrogenase [Bilophila wadsworthia
           3_1_6]
          Length = 486

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++  +         ++H    +    +    V  S   + +
Sbjct: 41  NIPLVSAAMDTVTESAMAISMARAGGIG-----IVHKNMSIERQKLEIEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    +  A+ ++   R   + VV E  KL GI+T  D+   F +DL    V DV
Sbjct: 96  DPITVEPDDTVEHALDLMHAYRVSGLPVVREK-KLVGILTNRDVR--FVEDLAGTKVRDV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N   +   T L  A   L  H I  L+VVD+  +  G++   D+
Sbjct: 153 MTSENLITVPTGTTLEEAKHHLHTHRIEKLLVVDEKGELAGLLTMKDI 200


>gi|229824656|ref|ZP_04450725.1| hypothetical protein GCWU000282_02003 [Catonella morbi ATCC 51271]
 gi|229786027|gb|EEP22141.1| hypothetical protein GCWU000282_02003 [Catonella morbi ATCC 51271]
          Length = 492

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLRVELAPNLKLNIPIISASMDTVTDSTMAIAMARQGGLG-----VIHKNMSIQEQAEE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + + +          + DA  ++S  R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSENGVIIDPFYLTPDNTIEDAEELMSRYRISGVPIVESLESRKLVGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +   + D M     V     T L  A ++L QH I  L +VD+  +  G++  
Sbjct: 147 --FIPDYSH-KIADYMTHEKLVTAPVGTTLEEAEKILHQHRIEKLPIVDESGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +        + + +    +G  L +A  IL + R   + +VDE  +L G+IT  DI +  
Sbjct: 151 YSHKIADYMTHEKLVTAPVGTTLEEAEKILHQHRIEKLPIVDESGRLSGLITIKDIEKVI 210

Query: 277 H 277
            
Sbjct: 211 Q 211


>gi|212637858|ref|YP_002314378.1| inosine 5'-monophosphate dehydrogenase [Anoxybacillus flavithermus
           WK1]
 gi|212559338|gb|ACJ32393.1| IMP dehydrogenase/GMP reductase [Anoxybacillus flavithermus WK1]
          Length = 488

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLTVELSKTLKLNIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSESGVITDPFFLTPEHQVYDAEHLMGKYRISGVPIVNNAEEQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A ++L+++ I  L +VDD     G++  
Sbjct: 145 --FIQD-YSMKISDVMTKENLITAPVGTTLAEAEKILQKYKIEKLPLVDDQGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|332971214|gb|EGK10177.1| inosine-5'-monophosphate dehydrogenase [Desmospora sp. 8437]
          Length = 485

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 72/177 (40%), Gaps = 13/177 (7%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
               H  AP  SA M       +AIA+            ++H   ++         V  S
Sbjct: 37  GDRIHLNAPLLSAGMDTVTEAPMAIAIARQGGIG-----IIHKSMEIREQAEEVDRVKRS 91

Query: 227 GDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +            + DA +++S+ R   V +VD  +KL GI+T  D+   F +D  +
Sbjct: 92  ESGVITNPFYLHPDHQVYDAESLMSKFRISGVPIVDRDRKLVGILTNRDLR--FVRD-YS 148

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  VM + N       T LT A ++L++H I  L +VD      G++   D+ + 
Sbjct: 149 IPISAVMTRDNLVTAPVGTTLTDAEEVLQKHKIEKLPLVDGEGVLKGLITIKDIEKA 205


>gi|291296715|ref|YP_003508113.1| CBS domain-containing protein [Meiothermus ruber DSM 1279]
 gi|290471674|gb|ADD29093.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
          Length = 145

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                 +V     + +A  I+ +  F  + VV E  +L GI+T+ D+      D      
Sbjct: 7   MTPDPQVVTPDVAVPEAAQIMKKGGFRRLPVV-EEGRLVGIVTDRDLKEAMPSDATSLSI 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 ++ LSV ++M ++P  + +   L  A +L+ ++ +  L VV    K +GIV   
Sbjct: 66  WEINYLISRLSVGEIMTRDPISVADTLPLQAAAKLMLEYKVGGLPVV-HEGKLVGIVTVT 124

Query: 334 DLLRF 338
           D+LR 
Sbjct: 125 DVLRA 129



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M  +P+V+  D  +  A Q++++     L VV++  + +GIV   DL   
Sbjct: 3   VKDFMTPDPQVVTPDVAVPEAAQIMKKGGFRRLPVVEE-GRLVGIVTDRDLKEA 55



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL  A  ++ E + G + VV E  KL GI+T  D+ R F +    L V 
Sbjct: 88  VADTLPLQAAAKLMLEYKVGGLPVVHE-GKLVGIVTVTDVLRAFLQREAELLVG 140


>gi|117923874|ref|YP_864491.1| nucleotidyl transferase [Magnetococcus sp. MC-1]
 gi|117607630|gb|ABK43085.1| Nucleotidyl transferase [Magnetococcus sp. MC-1]
          Length = 351

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 52/109 (47%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
               V    PL+ A+ I+SE   G   VVD   KL G++T+GD+ R   + ++  + V +
Sbjct: 7   KSVRVAPEAPLMRALEIISEGALGVALVVDADDKLLGLVTDGDVRRGLLRHISLDVPVRE 66

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM   P V  +       M L+R   +  + VVDD  + +G+    D+ 
Sbjct: 67  VMCTTPTVARDSDTQEHIMTLMRTRTLHHIPVVDDQGRVVGLEWLKDMT 115



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +  +  L  A++++ +  + V +VVD   K +G+V   D +R G++
Sbjct: 9   VRVAPEAPLMRALEIISEGALGVALVVDADDKLLGLVTDGD-VRRGLL 55


>gi|316934642|ref|YP_004109624.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           DX-1]
 gi|315602356|gb|ADU44891.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           DX-1]
          Length = 498

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 46  NIPIIASAMDTVTEARMAIAMAQAGGLGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV  G      KL GI+T  D+            V +
Sbjct: 105 ISPDAKLADALALMNQYGFSGIPVVTGGHGHGPGKLVGILTNRDVRFATDP---AQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A +LL QH I  L+VVD+  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQDEAKKLLHQHRIEKLLVVDEQYRCVGLITVKDMEKA 213



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 29/62 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            + +++  V+ G    +A  +L + R   + VVDE  +  G+IT  D+ +     L +  
Sbjct: 163 MTHENLVTVREGVSQDEAKKLLHQHRIEKLLVVDEQYRCVGLITVKDMEKAVAHPLASKD 222

Query: 285 VE 286
            +
Sbjct: 223 AQ 224


>gi|268609150|ref|ZP_06142877.1| inosine 5'-monophosphate dehydrogenase [Ruminococcus flavefaciens
           FD-1]
          Length = 490

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 13/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +     H   P  +A M       +AIA+            ++H    +      
Sbjct: 33  IQIGTQLTKTIHLNTPIMTAAMDTVTDSRMAIAIAREGGIG-----IIHKNMTIEQQAEE 87

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + + +          + DA  ++ + +   V +VD   KL GIIT  D+   
Sbjct: 88  VDKVKRSENGVIVDPFSLTEDHIVADADELMGKYKISGVPIVDGTGKLVGIITNRDMR-- 145

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D N   + +VM K N       T L  A ++LR H I  L +VD      G++   D
Sbjct: 146 FLTDFN-AKISEVMTKDNLITAPVGTTLEQAQEILRAHKIEKLPLVDGEGYLKGLITIKD 204

Query: 335 L 335
           +
Sbjct: 205 I 205



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 54/122 (44%), Gaps = 15/122 (12%)

Query: 221 SDVMHSGDSIPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           + +         + +  P +  A+  +++ R   +A+  EG    GII      +N   +
Sbjct: 31  NMIQIGTQLTKTIHLNTPIMTAAMDTVTDSRM-AIAIAREGG--IGII-----HKNMTIE 82

Query: 280 LNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                V+ V      +I +P  + ED ++  A +L+ ++ IS + +VD   K +GI+   
Sbjct: 83  QQAEEVDKVKRSENGVIVDPFSLTEDHIVADADELMGKYKISGVPIVDGTGKLVGIITNR 142

Query: 334 DL 335
           D+
Sbjct: 143 DM 144


>gi|172039120|ref|YP_001805621.1| poly(A) polymerase/tRNA nucleotidyltransferase family protein
           [Cyanothece sp. ATCC 51142]
 gi|171700574|gb|ACB53555.1| poly(A) polymerase/tRNA nucleotidyltransferase family protein
           [Cyanothece sp. ATCC 51142]
          Length = 905

 Score = 99.6 bits (247), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 33/112 (29%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       ++VVDE   L G+I+  D+    H   +   V
Sbjct: 325 MSSPVRTIRPETTIEQAQRMLFRYGHSGLSVVDENDHLVGVISRRDLDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M KN K I  DTLL     ++  +++  L V++D  K IGIV   DLLR
Sbjct: 385 KGYMSKNLKTIHPDTLLPDIESIMVTYDVGRLPVINDD-KLIGIVTRTDLLR 435



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + I  +T +  A ++L ++  S L VVD+    +G++   DL
Sbjct: 319 LTARDLMSSPVRTIRPETTIEQAQRMLFRYGHSGLSVVDENDHLVGVISRRDL 371



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 7/83 (8%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   ++  +     L D  +I+     G + V+++  KL GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMSKNLKTIHPDTLLPDIESIMVTYDVGRLPVINDD-KLIGIVTRTD 432

Query: 272 IFRNFH------KDLNTLSVEDV 288
           + R  H      KD N   V  V
Sbjct: 433 LLRQIHQQRKEVKDENGKKVATV 455


>gi|15899877|ref|NP_344482.1| hypothetical protein SSO3174 [Sulfolobus solfataricus P2]
 gi|284175210|ref|ZP_06389179.1| hypothetical protein Ssol98_11260 [Sulfolobus solfataricus 98/2]
 gi|13816604|gb|AAK43272.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601556|gb|ACX91159.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 131

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           VK    + DA  I+  +  G + +VDE  K  GI+TE DI R    ++     V  +M +
Sbjct: 14  VKPETSIRDAAKIMKRENLGSLIIVDETNKPIGIVTERDILRAVADEVALDSPVSTIMTR 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               I  +  +T A+ ++ Q+N+  L VV    + +G++   D  + 
Sbjct: 74  GLITIPPNKDVTEALIIMYQNNVRHLAVVGQSGELVGVISIRDAAKA 120



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 34/54 (62%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D++ +NP  +  +T +  A +++++ N+  L++VD+  K IGIV   D+LR 
Sbjct: 3   VADLITRNPLTVKPETSIRDAAKIMKRENLGSLIIVDETNKPIGIVTERDILRA 56


>gi|288574935|ref|ZP_06393292.1| inosine-5'-monophosphate dehydrogenase [Dethiosulfovibrio
           peptidovorans DSM 11002]
 gi|288570676|gb|EFC92233.1| inosine-5'-monophosphate dehydrogenase [Dethiosulfovibrio
           peptidovorans DSM 11002]
          Length = 491

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 64/172 (37%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    L         V  S   + +
Sbjct: 45  NIPICSAAMDTVTEGRLAIAVAREGGIG-----IVHRNTTLEKQAREVDKVKRSESGVIV 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L  A+ ++S      V +VD+G+KL GIIT  D+      D     + +V
Sbjct: 100 DPFYLHPEDRLSQALELMSHYHISGVPIVDDGKKLVGIITNRDLRFIHDYD---QPISEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     E T L  A Q+L  H +  L +VD      G++   D+ +  
Sbjct: 157 MTWENLITAPEGTTLDDAQQILMCHKVEKLPIVDCNGVLKGLITIKDIQKVK 208



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 233 VKIGCPL-IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED-VMI 290
           +K+  P+   A+  ++E R   +AV  EG    GI+          ++++ +   +  +I
Sbjct: 42  IKLNIPICSAAMDTVTEGRL-AIAVAREGG--IGIVHRNTTLEKQAREVDKVKRSESGVI 98

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +P  +  +  L+ A++L+  ++IS + +VDD +K +GI+   DL
Sbjct: 99  VDPFYLHPEDRLSQALELMSHYHISGVPIVDDGKKLVGIITNRDL 143


>gi|224369971|ref|YP_002604135.1| AcuB2 [Desulfobacterium autotrophicum HRM2]
 gi|223692688|gb|ACN15971.1| AcuB2 [Desulfobacterium autotrophicum HRM2]
          Length = 229

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  +     +I+A  I+       + VVD+   L+GIIT+ DI             
Sbjct: 7   MVKKVITIDKNRSVIEAQEIMQANDIRHLPVVDKDNHLQGIITDRDIRSSMPFMLFDEKE 66

Query: 274 RNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           RN   + +  ++V D+M  NPK I     +  A+ L+++  +    VVD+     GI+  
Sbjct: 67  RNLQLEKIKKMTVADIMTPNPKTISPMDTIQDALLLIQREKVGAFPVVDEKGALTGILSV 126

Query: 333 LDLLRF 338
            DLLR 
Sbjct: 127 RDLLRA 132



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V   M+K    I ++  +  A ++++ ++I  L VVD      GI+   D+
Sbjct: 3   VSKSMVKKVITIDKNRSVIEAQEIMQANDIRHLPVVDKDNHLQGIITDRDI 53



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 31/73 (42%), Gaps = 1/73 (1%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F       +L  +       + + +   +  +   + DA+ ++  ++ G   VVDE   L
Sbjct: 62  FDEKERNLQLEKIKKMTVADIMTPNPKTISPMDT-IQDALLLIQREKVGAFPVVDEKGAL 120

Query: 264 KGIITEGDIFRNF 276
            GI++  D+ R F
Sbjct: 121 TGILSVRDLLRAF 133


>gi|242766797|ref|XP_002341242.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
 gi|218724438|gb|EED23855.1| CBS and PB1 domain protein [Talaromyces stipitatus ATCC 10500]
          Length = 674

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 77/208 (37%), Gaps = 20/208 (9%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
                 +             P S      P ++ I Q  +G +   A  + +N S+ D  
Sbjct: 9   GTPNKTIGRGKMPDFDYNSSPGSHIPRPKPESA-ISQSDVGSSATAASRQRQNQSKRDEA 67

Query: 206 VLHP-GGKLGTLFVCASDVMHSGDSIP------------LVKIGCPLIDAITILSEKRFG 252
           +       L           H+  + P             +K    + +A  +++ KR  
Sbjct: 68  IRRKMEADLNKKRHHVQRPRHNRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKRED 127

Query: 253 CVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           CV V D+  ++ GI T  D+  R     L    +++ ++M KNP     DT  T A+ L+
Sbjct: 128 CVLVTDDDDRIAGIFTAKDLAFRVVGAGLKAREVTIAEIMTKNPLCARTDTSATDALDLM 187

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     L V+D+ Q   GI+   D+ +
Sbjct: 188 VRKGFRHLPVMDENQDISGIL---DITK 212



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T S
Sbjct: 273 MPPTTVSVRTSVKEAAALMKEHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCS 331

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 332 VVRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 382


>gi|303244867|ref|ZP_07331194.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484744|gb|EFL47681.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 399

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             V         +    P++DA+  + +       +VDE  KL GIIT+ DI +   +  
Sbjct: 63  ETVESLMFKPHCIDQNTPVMDAVCEILDCGQRAAPIVDEKGKLVGIITDYDIMKRAGESE 122

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + V  +M ++P  I +D  +  A  L+R++NI  L+V+D      GIV   D++R 
Sbjct: 123 LLKDVKVTKIMSRSPITIDKDESIGKARSLMRKYNIGRLIVLDKEGNPTGIVTEDDIIRK 182



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 50/134 (37%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   +     +  A +++ +   G + V+D+     GI+TE DI R   K 
Sbjct: 127 VKVTKIMSRSPITIDKDESIGKARSLMRKYNIGRLIVLDKEGNPTGIVTEDDIIRKVFKP 186

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V +               +M         D+ +    +L+ +H+I  + +     
Sbjct: 187 KKKMTVGELAGEKVPRMAQPVHIIMNSPIITADIDSSVANVAKLMEKHDIRGVPIT-KKG 245

Query: 325 KAIGIVHFLDLLRF 338
              GIV  +D++++
Sbjct: 246 TLRGIVTRIDIMKY 259



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +  +   +  V    P+  AI I+    F  + V+D  + +  ++T  D+          
Sbjct: 7   IEIATKDVITVTPDTPISKAIGIMDNNHFHNLVVMDNDENIY-MVTIHDL---LLASSLN 62

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VE +M K P  I ++T +  A+  +         +VD+  K +GI+   D+++
Sbjct: 63  ETVESLMFK-PHCIDQNTPVMDAVCEILDCGQRAAPIVDEKGKLVGIITDYDIMK 116



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V ++  K+   +  DT ++ A+ ++  ++   L+V+D+ +    +V   DLL
Sbjct: 5   PVIEIATKDVITVTPDTPISKAIGIMDNNHFHNLVVMDNDENIY-MVTIHDLL 56


>gi|301299204|ref|ZP_07205491.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus salivarius
           ACS-116-V-Col5a]
 gi|300853164|gb|EFK80761.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus salivarius
           ACS-116-V-Col5a]
          Length = 494

 Score = 99.6 bits (247), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLAKNIKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMTIERQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + +A  ++ + R   V +V+  E +K  GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPDNKVFEAEALMHKYRISGVPIVENAENRKFCGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  + + ++DVM K N     E T L  A ++L+Q+ I  L +V++  +  G++  
Sbjct: 147 FVTD---SKVKIDDVMTKENLITAPEGTSLEKAEEILQQYKIEKLPMVNEEGQLTGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|242372681|ref|ZP_04818255.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
 gi|242349598|gb|EES41199.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           M23864:W1]
          Length = 488

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDRIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMSIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  + + L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVITNPFFLTPDESVYEAEALMGKYRISGVPIVDNHDDRNLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L+ H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKENLITAPVGTTLDEAEAILQDHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|219849520|ref|YP_002463953.1| CBS domain-containing membrane protein [Chloroflexus aggregans DSM
           9485]
 gi|219543779|gb|ACL25517.1| CBS domain containing membrane protein [Chloroflexus aggregans DSM
           9485]
          Length = 154

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  V +  PL +A+ ++ E     + VV +  +L+GIIT+GDI             
Sbjct: 19  MRTPAITVNLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADVMRIAGLDP 78

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               + L  + V +VM +NP  +  +T L  A  L+ ++ I  L V+D+ ++ IGI+   
Sbjct: 79  VDIAQALRNVKVYEVMTENPIAVTPETGLREAALLMIENKIGGLPVIDEHKRVIGIITES 138

Query: 334 DLLRF 338
           DL   
Sbjct: 139 DLFEA 143



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 31/73 (42%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +              ++   V     L +A  ++ E + G + V+DE +++ GIITE D
Sbjct: 80  DIAQALRNVKVYEVMTENPIAVTPETGLREAALLMIENKIGGLPVIDEHKRVIGIITESD 139

Query: 272 IFRNFHKDLNTLS 284
           +F    + L +  
Sbjct: 140 LFEALVQQLESHP 152



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M      +     L+ A+ L+R+H+I  L VV D  +  GI+   D+    ++
Sbjct: 19  MRTPAITVNLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADVM 71


>gi|311694145|gb|ADP97018.1| cyclic nucleotide-binding domain (cNMP-BD) protein [marine
           bacterium HP15]
          Length = 638

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--N 281
            ++  +  +     P+  A+  + E   G + V DE +   GI T  D+     +     
Sbjct: 176 RYALRNPIVCSPDLPVRKAVARMHENNVGSIIVTDENRIPTGIFTLRDLRTMIAEGTGPL 235

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              ++ VM KNP  +        A  L+ +H+ + L V+DD +K IG+V   DL
Sbjct: 236 DTPIQQVMTKNPCCLPSHADAFEAAMLMAEHHFAHLCVIDDDRKLIGVVSERDL 289



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +E   ++NP V   D  +  A+  + ++N+  ++V D+ +   GI    DL
Sbjct: 171 DTPLERYALRNPIVCSPDLPVRKAVARMHENNVGSIIVTDENRIPTGIFTLRDL 224


>gi|317057833|ref|YP_004106300.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 7]
 gi|315450102|gb|ADU23666.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 7]
          Length = 493

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 71/184 (38%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  ++ M       +AIA+            ++H    +      
Sbjct: 34  VDLHTHLTKDIVLNTPIMTSAMDTVTESKMAIAIAREGGIG-----IIHKNMTIAQQAEE 88

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + + +          + +A  ++ + +   V +VDE  KL+GI+T  D+   
Sbjct: 89  VDKVKRSENGVIVNPFSLTADRTVEEADVLMGKYKISGVPIVDENGKLEGILTNRDLR-- 146

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D  ++ +  VM + N      DT L  A ++L QH I  L +VD+     G++   D
Sbjct: 147 FITDF-SIKIGKVMTRENLVTAPVDTDLDGAKKILMQHKIEKLPLVDNNGILKGLITIKD 205

Query: 335 LLRF 338
           + + 
Sbjct: 206 IEKA 209


>gi|296272965|ref|YP_003655596.1| inosine-5'-monophosphate dehydrogenase [Arcobacter nitrofigilis DSM
           7299]
 gi|296097139|gb|ADG93089.1| inosine-5'-monophosphate dehydrogenase [Arcobacter nitrofigilis DSM
           7299]
          Length = 481

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 69/170 (40%), Gaps = 14/170 (8%)

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             +   ++A+  +    A AIA+            ++H    + T  +    V  S   +
Sbjct: 39  LNVPFVSAAMDTVTEYQA-AIAMARLGGIG-----IIHKNMDIETQVLQCKKVKKSESGM 92

Query: 231 PL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            +    +K    + DA  I++  +   V VVD+   L GI+T  D+   F KD  T    
Sbjct: 93  IIDPITIKPDQTIQDAEDIMASYKISGVPVVDDNNILVGILTNRDMR--FTKDF-TQKAC 149

Query: 287 DVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D M K P     E T L  A  ++    +  L +V++  K IG++   D+
Sbjct: 150 DKMTKMPLLTAKEGTTLDEAADIMHASKVEKLPIVNNENKLIGLITIKDI 199


>gi|226355479|ref|YP_002785219.1| malate dehydrogenase [Deinococcus deserti VCD115]
 gi|226317469|gb|ACO45465.1| putative malate dehydrogenase [Deinococcus deserti VCD115]
          Length = 505

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +A+A+            V+H    +         V  S   + +
Sbjct: 63  NIPFLSAAMDTVTETGMAVAMAREGGIG-----VIHKNMSIDAQAEMVRKVKRSESGMIV 117

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  ++SE R   V V D   KL GIIT  D+      D  +  V DV
Sbjct: 118 DPITLPPHATVADAERLMSEYRISGVPVTDPSGKLLGIITNRDMRFV---DDLSARVGDV 174

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + N   +   T L  A ++ +++ I  L+V D+     G++   DL +
Sbjct: 175 MTRENLVTVPVGTTLDEAHEMFKRNRIEKLLVTDEAGLLRGLITIKDLAK 224



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 9/121 (7%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDL 280
            HS      V +   L   I +        +  V E      +  EG I    +N   D 
Sbjct: 41  RHSQVLPHEVSVEASLTRRIRLNIPFLSAAMDTVTETGMAVAMAREGGIGVIHKNMSIDA 100

Query: 281 NTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               V  V      MI +P  +     +  A +L+ ++ IS + V D   K +GI+   D
Sbjct: 101 QAEMVRKVKRSESGMIVDPITLPPHATVADAERLMSEYRISGVPVTDPSGKLLGIITNRD 160

Query: 335 L 335
           +
Sbjct: 161 M 161



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + + +++  V +G  L +A  +    R   + V DE   L+G+IT  D+ +  
Sbjct: 170 RVGDVMTRENLVTVPVGTTLDEAHEMFKRNRIEKLLVTDEAGLLRGLITIKDLAKRI 226


>gi|254167939|ref|ZP_04874787.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
 gi|289596005|ref|YP_003482701.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
 gi|197622982|gb|EDY35549.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
 gi|289533792|gb|ADD08139.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
          Length = 482

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 83/207 (40%), Gaps = 13/207 (6%)

Query: 136 RFSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +     I +T ++  ++     +    + +            P  S+ M     D +AIA
Sbjct: 5   KLKNAKIGLTFDDVLLLPSKTPVEPKDVDISSNITRHIRAKIPILSSPMDTVTEDRMAIA 64

Query: 193 LLE--SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           L E  +      +  +      +  +    S ++     +  V     + +A  I+ E +
Sbjct: 65  LAELGALGIIHRNLTIEEQVNLVKNVKKEESLIIR---DLHTVTPDTTIEEAERIMREYK 121

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + VV + +KL GI+T  DI   F++    + V ++M KN     E   +  A++++ 
Sbjct: 122 IAGLPVV-KDEKLVGILTNRDIR--FYRG-GKIKVSELMTKNVITAPEGISIEEAIEIMH 177

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ I  L +V    K  G++   D+L+
Sbjct: 178 KNRIEKLPIV-KDGKLKGLITAKDILK 203


>gi|254168170|ref|ZP_04875017.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
 gi|197622936|gb|EDY35504.1| inosine-5'-monophosphate dehydrogenase [Aciduliprofundum boonei
           T469]
          Length = 482

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 39/207 (18%), Positives = 83/207 (40%), Gaps = 13/207 (6%)

Query: 136 RFSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +     I +T ++  ++     +    + +            P  S+ M     D +AIA
Sbjct: 5   KLKNAKIGLTFDDVLLLPSKTPVEPKDVDISSNITRHIRAKIPILSSPMDTVTEDRMAIA 64

Query: 193 LLE--SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           L E  +      +  +      +  +    S ++     +  V     + +A  I+ E +
Sbjct: 65  LAELGALGIIHRNLTIEEQVNLVKNVKKEESLIIR---ELHTVTPDTTIEEAERIMREYK 121

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + VV + +KL GI+T  DI   F++    + V ++M KN     E   +  A++++ 
Sbjct: 122 IAGLPVV-KDEKLVGILTNRDIR--FYRG-GKIKVSELMTKNVITAPEGISIEEAIEIMH 177

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ I  L +V    K  G++   D+L+
Sbjct: 178 KNRIEKLPIV-KDGKLKGLITAKDILK 203


>gi|152994733|ref|YP_001339568.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150835657|gb|ABR69633.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Marinomonas sp. MWYL1]
          Length = 625

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS 284
               +        +      ++E R   + VV E +KL GI+T+ D+  R      +  S
Sbjct: 160 MTRQLIQASPEESVQTIAIRMTEARVSSILVV-EDKKLSGIVTDRDLRSRILALGGSADS 218

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V+DVM ++P  +  D L+  A  L+ + NI  L +VD+ Q+A+G++   DLLR
Sbjct: 219 LVKDVMTRDPVSLRPDALVMQAQTLMSESNIHHLPIVDEEQRAVGMLTAADLLR 272



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  V  +M +       +  +      + +  +S ++VV + +K  GIV   DL
Sbjct: 153 STPVAHIMTRQLIQASPEESVQTIAIRMTEARVSSILVV-EDKKLSGIVTDRDL 205



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 24/42 (57%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    ++ A T++SE     + +VDE Q+  G++T  D+ R+
Sbjct: 232 RPDALVMQAQTLMSESNIHHLPIVDEEQRAVGMLTAADLLRH 273


>gi|115252811|emb|CAK98247.1| inosine-5'-monophosphate dehydrogenase transmembrane protein
           [Spiroplasma citri]
          Length = 481

 Score = 99.2 bits (246), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 13/184 (7%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              + L  +         P  S+ M       LAIA+            ++H    +   
Sbjct: 23  PYQIDLRTKLTKNIELNIPFISSAMDTVTESKLAIAIAREGGIG-----IIHKNLSIDKQ 77

Query: 217 FVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                 V  +     +          + DA  I+++ R   + +VDE  KL GIIT  DI
Sbjct: 78  VAEVEKVKRNESGFIINPITLKPTMTVQDAENIMAQYRISGLPIVDEENKLLGIITNRDI 137

Query: 273 FRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                    T SV+  M  KN     E+  L  A  +L  + I  L +V++     G++ 
Sbjct: 138 R---ACHDLTASVDKFMTVKNLITTHENIDLEKAKDILLNNRIEKLPIVNEKNILTGLIT 194

Query: 332 FLDL 335
             D+
Sbjct: 195 IKDI 198


>gi|239906876|ref|YP_002953617.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus
           RS-1]
 gi|239796742|dbj|BAH75731.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio magneticus
           RS-1]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 47/168 (27%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI L  S         V+H    +    +    V  S   + +
Sbjct: 41  NIPLVSAAMDTVTESRMAIQLARSGGVG-----VVHKNMTIAQQRLEVEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+T++SE     + VVD G  L GI+T  D+   F KD +  +V  V
Sbjct: 96  SPITVPPAMTVEQALTVMSEYSISGLPVVD-GDTLVGIVTNRDVR--FVKD-SVTTVGQV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN   +   T L  A   L  + I  L+VVDD  K  G++   D+
Sbjct: 152 MTSKNLVTVPVGTTLEEAKHHLHANRIEKLLVVDDNNKLRGLITIKDI 199


>gi|116250620|ref|YP_766458.1| inosine 5'-monophosphate dehydrogenase [Rhizobium leguminosarum bv.
           viciae 3841]
 gi|115255268|emb|CAK06343.1| putative inosine-5'-monophosphate dehydrogenase [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 494

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPIISSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPIEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L DA+ ++       + VV++  +L GI+T  D+            + ++M + 
Sbjct: 105 IGPDATLADALGLMKSYSISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTRD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|159905697|ref|YP_001549359.1| hypothetical protein MmarC6_1314 [Methanococcus maripaludis C6]
 gi|159887190|gb|ABX02127.1| protein of unknown function DUF39 [Methanococcus maripaludis C6]
          Length = 513

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +  +   + +A  +L E     + +VDE  KL GIIT  DI +   +D +  S+ +
Sbjct: 396 KPAVVGSLNTSITEASKVLIENNINHLPIVDENNKLSGIITSWDIAKAMAQDKH--SISE 453

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M         D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 454 IMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K   V   +T +T A ++L ++NI+ L +VD+  K  GI+   D+ + 
Sbjct: 390 VKDILSKPAVVGSLNTSITEASKVLIENNINHLPIVDENNKLSGIITSWDIAKA 443



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            +          +    +  +V       +  A   +S      + VVD   K+ G+++ 
Sbjct: 439 DIAKAMAQDKHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSA 498

Query: 270 GDIFRNFHK 278
            DI +   +
Sbjct: 499 EDISKLIGR 507


>gi|212528298|ref|XP_002144306.1| CBS and PB1 domain protein [Penicillium marneffei ATCC 18224]
 gi|210073704|gb|EEA27791.1| CBS and PB1 domain protein [Penicillium marneffei ATCC 18224]
          Length = 675

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 70/171 (40%), Gaps = 16/171 (9%)

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVLHP-GGKLGTLFVCASDVMHSGDSIP----- 231
           SA+ Q   G A   A  + +N S+ D  +       L           H+  + P     
Sbjct: 41  SALGQSDAGSAATAASRQRQNQSKRDEAIRRKMEADLNKKRHHVQRPRHNRKAPPGTVLA 100

Query: 232 -------LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--N 281
                   +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     L   
Sbjct: 101 LKPSQALQIKPNTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAR 160

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++ ++M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 161 EVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 211



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T S
Sbjct: 274 MPPTTVSVRTSVKEAAALMKEHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCS 332

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 333 VVRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 383


>gi|91772812|ref|YP_565504.1| homoserine O-acetyltransferase [Methanococcoides burtonii DSM 6242]
 gi|91711827|gb|ABE51754.1| Homoserine O-acetyltransferase [Methanococcoides burtonii DSM 6242]
          Length = 488

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  ++ G  +  A  ++ E+    + VV+E   L GI+T  DI +     L    +
Sbjct: 376 MTEKVATIREGASIDTAAKVMFEEALTHLPVVNENGCLVGIVTSWDISKAVA--LKCSKL 433

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E++M ++      D  +  A + + +H+IS L VVD+  + IGI+   D+ R 
Sbjct: 434 ENIMTRDVLTAFPDEPIVAAAKRMERHSISALPVVDEKNRLIGIIDSEDINRL 486



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 19/69 (27%), Positives = 32/69 (46%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G I    H  L   SV DVM +    I E   +  A +++ +  ++ L VV++    +GI
Sbjct: 357 GQINYVIHNFLTHTSVADVMTEKVATIREGASIDTAAKVMFEEALTHLPVVNENGCLVGI 416

Query: 330 VHFLDLLRF 338
           V   D+ + 
Sbjct: 417 VTSWDISKA 425



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              P++ A   +       + VVDE  +L GII   DI R   
Sbjct: 446 PDEPIVAAAKRMERHSISALPVVDEKNRLIGIIDSEDINRLIG 488


>gi|158317740|ref|YP_001510248.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EAN1pec]
 gi|158113145|gb|ABW15342.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EAN1pec]
          Length = 597

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/207 (21%), Positives = 74/207 (35%), Gaps = 32/207 (15%)

Query: 152 VACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLE--- 195
           +    D VL LP   E  P G+              P  S+ M       +AIA+     
Sbjct: 106 LGLTFDDVLLLPAASEVAPSGVDTTTRLSRNISLAVPLVSSAMDTVTEARMAIAMARQGG 165

Query: 196 ----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
                RN S +D        +   + +          S         + +A  +++  R 
Sbjct: 166 VGVLHRNLSVDD--------QAQQVDMVKRSESGMITSPITCGPDATIEEANVLMARYRI 217

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLR 310
             V V +   +L GI+T  DI   F +D  T  V +VM + P +          A+ LLR
Sbjct: 218 SGVPVTEPDGRLVGIVTNRDIR--FERD-YTRRVHEVMTRMPLITAPVGVSADDALALLR 274

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +  L +VD   +  G++   D  +
Sbjct: 275 HNKVEKLPIVDGHDRLCGLITVKDFTK 301


>gi|329930211|ref|ZP_08283824.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. HGF5]
 gi|328935233|gb|EGG31714.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. HGF5]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEAPLAIAIAREGGIG-----IIHKNMTVEQQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE  KL GI+T  D+   F  D NT+ + +V
Sbjct: 98  NPFSLHADHLVSDAEKLMGKFRISGVPIVDENNKLIGILTNRDLR--FVHDYNTV-ISEV 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A  +L++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDIEKA 205



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 29/61 (47%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L DA  IL + +   + +VD+   LKG+IT  DI +  
Sbjct: 147 YNTVISEVMTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDIEKAI 206

Query: 277 H 277
            
Sbjct: 207 Q 207


>gi|114706239|ref|ZP_01439141.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
 gi|114538100|gb|EAU41222.1| hypothetical protein FP2506_00605 [Fulvimarina pelagi HTCC2506]
          Length = 144

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
               L +   +LSEKR G + +V++  +L GI++E DI R       D+ T  V++ M  
Sbjct: 19  PSVTLAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVRVVAARGPDVLTQLVKEAMTP 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               + ED  +  AM+L+ +     L VVD+ ++ +G V   D+++  I
Sbjct: 79  KVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGDVVKRKI 127



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 37/67 (55%), Gaps = 3/67 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    + +A+ +++EKRF  + VVDE ++L G ++ GD+ +   + ++    
Sbjct: 76  MTPKVVTVREDMSIDEAMRLMTEKRFRHLPVVDETEQLVGFVSIGDVVK---RKISEAEA 132

Query: 286 EDVMIKN 292
           E  M+++
Sbjct: 133 EASMMRD 139



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++   +     L    Q+L +  I  +++V+D  +  GIV   D++R
Sbjct: 12  RDVVTLTPSVTLAEVAQVLSEKRIGAIILVEDNGRLAGIVSERDIVR 58


>gi|325677911|ref|ZP_08157553.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8]
 gi|324110465|gb|EGC04639.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus albus 8]
          Length = 493

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 70/184 (38%), Gaps = 13/184 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +            P  ++ M       +AIA+            ++H    +      
Sbjct: 34  VDIHTHLTKDIVLNTPIMTSAMDTVTESKMAIAIAREGGIG-----IIHKNMTIAQQAEE 88

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + + +          + +A  ++ + +   V +VDE  KL+GI+T  D+   
Sbjct: 89  VDKVKRSENGVIVNPFSLTADRTVEEADKLMGKYKISGVPIVDENGKLEGILTNRDLR-- 146

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  D  ++ +  VM + N      DT L  A ++L QH I  L +VD      G++   D
Sbjct: 147 FITDF-SIKIGKVMTRENLVTAPVDTDLDGAKKILMQHKIEKLPLVDGDGVLKGLITIKD 205

Query: 335 LLRF 338
           + + 
Sbjct: 206 IEKA 209


>gi|158521897|ref|YP_001529767.1| inosine-5'-monophosphate dehydrogenase [Desulfococcus oleovorans
           Hxd3]
 gi|158510723|gb|ABW67690.1| inosine-5'-monophosphate dehydrogenase [Desulfococcus oleovorans
           Hxd3]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A AI++  +          +H    +    +    V  S   + +
Sbjct: 41  NIPIVSAAMDTVTESATAISMARAGGLG-----FIHRNMSIEAQAIEVGKVKKSESGMIV 95

Query: 233 VKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +      P+   ++++ E     V VV +G KL GI+T  D+   F  DL+   V +V
Sbjct: 96  DPVTTGPNEPISAVLSLMKEYNISGVPVV-QGDKLVGIVTNRDLR--FEGDLDR-KVSEV 151

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M      + E   L  + +LL +H I  L+VVD   +  G++   D+ +  
Sbjct: 152 MTSKLITVPEGITLEESKELLHRHKIEKLLVVDKKGRLAGMITMKDIEKLK 202


>gi|121702431|ref|XP_001269480.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
 gi|119397623|gb|EAW08054.1| CBS and PB1 domain protein [Aspergillus clavatus NRRL 1]
          Length = 587

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDV 288
            +K G  + +A  +++ KR  CV V D+ +++ GI T  D+        +    ++V ++
Sbjct: 36  QIKPGTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGMGQKARDITVAEI 95

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ R
Sbjct: 96  MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITR 141



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 203 PPTTVSVRTSVRDAAALMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPATCSV 261

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 262 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 311



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 50/182 (27%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G       +  +++M         +      DA+ ++  K F  + V+D
Sbjct: 71  FTAKDLAFRVVGMGQKARDITVAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 128

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL------------SVEDVMIK--------------- 291
           E Q + GI+   DI R F+  +  L            ++E V  +               
Sbjct: 129 ENQDISGIL---DITRCFYDAMEKLERAYSSSRKLYDALEGVQTELGSSQPQQIIQYVEA 185

Query: 292 -----------------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                             P  +   T +  A  L+++H+ + L+V D      GI    D
Sbjct: 186 LRSKMSGPTLETVLDGLPPTTVSVRTSVRDAAALMKEHHTTALLVQD-QGSITGIFTSKD 244

Query: 335 LL 336
           ++
Sbjct: 245 IV 246


>gi|148655071|ref|YP_001275276.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148567181|gb|ABQ89326.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 162

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 56/125 (44%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  V +  P+ +A+ ++ E     + VV +  +L+GIIT+GDI             
Sbjct: 24  MRAPAVTVNLAAPVSEALALMREHNIRRLPVVIDTGELRGIITQGDIRGADLLRVAGMDP 83

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  + V +VM ++P  +  +T L  A  L+ ++ I  L VVD+ +  +GI+   
Sbjct: 84  FDIADALRRIKVYEVMSEDPITVTPETSLREAAMLMIENKIGGLPVVDENRMVVGIITES 143

Query: 334 DLLRF 338
           DL   
Sbjct: 144 DLFEA 148



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 26/65 (40%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +              +    V     L +A  ++ E + G + VVDE + + GIITE D
Sbjct: 85  DIADALRRIKVYEVMSEDPITVTPETSLREAAMLMIENKIGGLPVVDENRMVVGIITESD 144

Query: 272 IFRNF 276
           +F   
Sbjct: 145 LFEAL 149


>gi|261403950|ref|YP_003240191.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. Y412MC10]
 gi|261280413|gb|ACX62384.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. Y412MC10]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEAPLAIAIAREGGIG-----IIHKNMTVEQQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE  KL GI+T  D+   F  D NT+ + +V
Sbjct: 98  NPFSLHADHLVSDAEKLMGKFRISGVPIVDENNKLIGILTNRDLR--FVHDYNTV-ISEV 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A  +L++H I  L +VDD     G++   D+ + 
Sbjct: 155 MTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDIEKA 205



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 29/61 (47%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L DA  IL + +   + +VD+   LKG+IT  DI +  
Sbjct: 147 YNTVISEVMTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDDDNVLKGLITIKDIEKAI 206

Query: 277 H 277
            
Sbjct: 207 Q 207


>gi|330813887|ref|YP_004358126.1| inosine-5'-monophosphate dehydrogenase [Candidatus Pelagibacter sp.
           IMCC9063]
 gi|327486982|gb|AEA81387.1| inosine-5'-monophosphate dehydrogenase [Candidatus Pelagibacter sp.
           IMCC9063]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 12/166 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       LAIA+ +           +H    +    +   +V      + + 
Sbjct: 40  IPIISAAMDTVSNYHLAIAIAQLGG-----MACIHKNMPVEEQSLQIKNVKKFESGMVIN 94

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                    + DAI ++S  +   + VVD  + L GIIT  D+   F KD     V+ +M
Sbjct: 95  PITIGPESDISDAIKLMSSNKISGIPVVDNNKTLVGIITNRDLR--FAKD-TKTKVKSLM 151

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K    + +   L  A +LL +H I  L+VV+   + +G++   DL
Sbjct: 152 TKKVVTVDQGVKLENAKKLLHEHRIEKLVVVNKKFQCVGLITVKDL 197


>gi|153939002|ref|YP_001392641.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. Langeland]
 gi|168179057|ref|ZP_02613721.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum NCTC
           2916]
 gi|226950721|ref|YP_002805812.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A2
           str. Kyoto]
 gi|152934898|gb|ABS40396.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. Langeland]
 gi|164511608|emb|CAO86110.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511610|emb|CAO86111.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511612|emb|CAO86112.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511614|emb|CAO86113.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511616|emb|CAO86114.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511618|emb|CAO86115.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|182670010|gb|EDT81986.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum NCTC
           2916]
 gi|226843490|gb|ACO86156.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A2
           str. Kyoto]
 gi|295320626|gb|ADG01004.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum F
           str. 230613]
          Length = 484

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEGKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|227891527|ref|ZP_04009332.1| inositol-5-monophosphate dehydrogenase [Lactobacillus salivarius
           ATCC 11741]
 gi|227866674|gb|EEJ74095.1| inositol-5-monophosphate dehydrogenase [Lactobacillus salivarius
           ATCC 11741]
 gi|300215045|gb|ADJ79461.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus salivarius
           CECT 5713]
          Length = 494

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLAKNIKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMTIERQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + +A  ++ + R   V +V+  E +K  GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPDNKVFEAEALMHKYRISGVPIVENAENRKFCGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  + + ++DVM K N     E T L  A ++L+Q+ I  L +V++  +  G++  
Sbjct: 147 FVTD---SKVKIDDVMTKENLITAPEGTSLEKAEEILQQYKIEKLPMVNEEGQLTGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|164511604|emb|CAO86108.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
 gi|164511606|emb|CAO86109.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum]
          Length = 484

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEGKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|258651452|ref|YP_003200608.1| inosine-5'-monophosphate dehydrogenase [Nakamurella multipartita
           DSM 44233]
 gi|258554677|gb|ACV77619.1| inosine-5'-monophosphate dehydrogenase [Nakamurella multipartita
           DSM 44233]
          Length = 513

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 45/221 (20%), Positives = 76/221 (34%), Gaps = 33/221 (14%)

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLA 184
             P +++  +  + +    D +L LP   +  P                 P  S+ M   
Sbjct: 14  GAPTVSM-EDKFATLGLTYDDILLLPDASDLVPSEADTSTWLSRNVRLRVPLVSSAMDTV 72

Query: 185 IGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGC 237
               +AI++          RN S  D        +     +               +   
Sbjct: 73  TEARMAISMAREGGLGVLHRNLSIED--------QASQAEIVKRSEAGMVTDPVTCRPDA 124

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            L +A  + ++ R   V V D    L GIIT  D+     K   +  V +VM K P V  
Sbjct: 125 TLREADALCAKFRISGVPVTDADSHLLGIITNRDMRFEVDK---SRPVREVMTKMPLVTA 181

Query: 298 E-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + A+ LLR+H I  L +VD   +  G++   D ++
Sbjct: 182 PVGVSASAALGLLRKHKIEKLPLVDADGRLRGLITVKDFVK 222


>gi|119468876|ref|ZP_01611901.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
 gi|119447528|gb|EAW28795.1| hypothetical protein ATW7_03912 [Alteromonadales bacterium TW-7]
          Length = 612

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIK 291
                +  +   + E     + V+ +   L G++T+ D+      D       V  +M  
Sbjct: 163 SPDASIRQSAKKMKEHGVSSIMVI-QHAHLVGVVTDRDLRNRVLADEVDPQEAVSSIMTT 221

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NPK I E+  +  A+ L+ ++NI  L V+D+    IG++   DLLR
Sbjct: 222 NPKFIFENNRVFSALHLMLKYNIHHLPVLDESHNPIGMLTSTDLLR 267



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + ++M +    +  D  +  + + +++H +S +MV+      +G+V   DL
Sbjct: 146 WSERRISELMTRTAITLSPDASIRQSAKKMKEHGVSSIMVIQHA-HLVGVVTDRDL 200


>gi|218441822|ref|YP_002380151.1| hypothetical protein PCC7424_4929 [Cyanothece sp. PCC 7424]
 gi|218174550|gb|ACK73283.1| CBS domain containing protein [Cyanothece sp. PCC 7424]
          Length = 153

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 33/141 (23%), Positives = 57/141 (40%), Gaps = 28/141 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V    PL +AI +++EK    + VV++   L G+I+E D+             
Sbjct: 9   MTPNPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLMWQETGVETPPYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + K+++     +V +VM   P  +  D  L  A QL+    I  L 
Sbjct: 69  MILDSVIYLQNPARYDKEIHKALGQTVGEVMSDKPITVKPDQPLREAAQLMHDKKIRRLP 128

Query: 319 VVD-DCQKAIGIVHFLDLLRF 338
           V++    K IGI+   D++R 
Sbjct: 129 VIESAQGKVIGIITSGDIIRA 149



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V+DVM  NP  +   T L  A++L+ + +IS L VV+D    +G++   DL+
Sbjct: 2   TKTVKDVMTPNPYTVTPQTPLQEAIKLMAEKHISGLPVVNDQGLLVGVISETDLM 56



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFH 277
             D    VK   PL +A  ++ +K+   + V++    K+ GIIT GDI R   
Sbjct: 99  MSDKPITVKPDQPLREAAQLMHDKKIRRLPVIESAQGKVIGIITSGDIIRAMA 151


>gi|157363330|ref|YP_001470097.1| inosine-5'-monophosphate dehydrogenase [Thermotoga lettingae TMO]
 gi|157313934|gb|ABV33033.1| inosine-5'-monophosphate dehydrogenase [Thermotoga lettingae TMO]
          Length = 485

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 14/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LA AL            V+H    +         V  +      
Sbjct: 39  SIPLVSAAMDTVTEAELAKALAREGGVG-----VIHKNMSIEEQAHQVLVVKRTENGVIY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++S  + G + VVDE  KL G+IT  DI   F K+  +  V ++
Sbjct: 94  DPVTIHPEDTIHDALMLMSTYKIGGLPVVDEEGKLMGLITNRDIR--FEKN-YSRKVREL 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M       V      L  A  +L  H +  L +VD      G++   D++
Sbjct: 151 MTPRTQLIVADPSISLDEAKGILHTHKVEKLPLVDSDNHLAGLITIKDIM 200


>gi|170757052|ref|YP_001782919.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum B1
           str. Okra]
 gi|169122264|gb|ACA46100.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum B1
           str. Okra]
          Length = 484

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEGKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|168700590|ref|ZP_02732867.1| serine phosphatase [Gemmata obscuriglobus UQM 2246]
          Length = 387

 Score = 99.2 bits (246), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
              +   V   CPL D +  ++  R G V V     KL+GI TE D+ R           
Sbjct: 1   MMSTPVRVPPSCPLRDVMGEMNRLRIGAVLVTTGEHKLQGIFTERDLLRRVADADPGWRE 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V   M  +P  I  +     A+ L+ Q  +  L VV + +  +G++    LL
Sbjct: 61  LPVSAWMTPDPITIGPNEAWEAAVSLMEQKRVRHLPVV-EDRTVLGLLSTRMLL 113



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 19/49 (38%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M+  P  +     L   M  + +  I  ++V     K  GI    DLLR
Sbjct: 1   MMSTPVRVPPSCPLRDVMGEMNRLRIGAVLVTTGEHKLQGIFTERDLLR 49


>gi|90962423|ref|YP_536339.1| inosine 5'-monophosphate dehydrogenase [Lactobacillus salivarius
           UCC118]
 gi|90821617|gb|ABE00256.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus salivarius
           UCC118]
          Length = 494

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLAKNIKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMTIERQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + +A  ++ + R   V +V+  E +K  GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPDNKVFEAEALMHKYRISGVPIVENAENRKFCGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  + + ++DVM K N     E T L  A ++L+Q+ I  L +V++  +  G++  
Sbjct: 147 FVTD---SKVKIDDVMTKENLITAPEGTSLEKAEEILQQYKIEKLPMVNEEGQLTGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|302390838|ref|YP_003826658.1| inosine-5'-monophosphate dehydrogenase [Acetohalobium arabaticum
           DSM 5501]
 gi|302202915|gb|ADL11593.1| inosine-5'-monophosphate dehydrogenase [Acetohalobium arabaticum
           DSM 5501]
          Length = 490

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 71/186 (38%), Gaps = 15/186 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +     S      P  SA M       LAIA+            ++H    +      
Sbjct: 29  VDVSTHLTSDIELNTPILSAGMDTVTEAELAIAMAREGGIG-----IIHKNMSVEQQAEE 83

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +            +A  ++S+ +   V +V+  E  KL GIIT  D+ 
Sbjct: 84  VDKVKRSESGVIVNPFYLTPDNFAYEAEHLMSKFKISGVPIVNNEEDMKLVGIITNRDLR 143

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F KD +   + +VM K   V     T L  A  +L+++ I  L +VDD  +  G++  
Sbjct: 144 --FEKDFDQ-KLSEVMTKEGLVTGPVGTTLEDAEDILQEYKIEKLPLVDDEYRLKGLITI 200

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 201 KDIEKA 206


>gi|217032520|ref|ZP_03438011.1| hypothetical protein HPB128_180g19 [Helicobacter pylori B128]
 gi|298736533|ref|YP_003729059.1| IMP dehydrogenase [Helicobacter pylori B8]
 gi|216945798|gb|EEC24421.1| hypothetical protein HPB128_180g19 [Helicobacter pylori B128]
 gi|298355723|emb|CBI66595.1| IMP dehydrogenase [Helicobacter pylori B8]
          Length = 481

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEIAKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIQAHRTLADAKAIADNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|124485276|ref|YP_001029892.1| hypothetical protein Mlab_0451 [Methanocorpusculum labreanum Z]
 gi|124362817|gb|ABN06625.1| protein of unknown function DUF39 [Methanocorpusculum labreanum Z]
          Length = 502

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 53/116 (45%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    +   +     + +A   L +     + V+D    L GI+T  D+ + F  D
Sbjct: 377 CHVNEMMVSTFVTITGQESVKEAAKRLLKGETNHLPVIDAENHLIGIVTTYDVSKAFAND 436

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              L+V ++M KN   I  D  +  A + L+QHNI  L+V+D  +  +G+++  DL
Sbjct: 437 AQDLTVSEIMTKNVITIAPDAPVDFAARTLQQHNIGALVVIDASRHILGMLNSYDL 492



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M+     I     +  A + L +   + L V+D     IGIV   D+ + 
Sbjct: 379 VNEMMVSTFVTITGQESVKEAAKRLLKGETNHLPVIDAENHLIGIVTTYDVSKA 432


>gi|322807606|emb|CBZ05181.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           H04402 065]
          Length = 484

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEGKLVGIITNRDI---LFENNYERKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|255526449|ref|ZP_05393360.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|296184823|ref|ZP_06853234.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|255509831|gb|EET86160.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
 gi|296050605|gb|EFG90028.1| inosine-5'-monophosphate dehydrogenase [Clostridium carboxidivorans
           P7]
          Length = 484

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 41  NIPLMSAGMDTVTNSKMAIAMAREGGIG-----IIHKNMSIEEQAMEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA++++S+ R   V +     KL GIIT  DI   F  D  +  + +V
Sbjct: 96  DPFSLSPDNSIEDALSLMSKYRISGVPITVA-GKLVGIITNRDIV--FETD-YSRKISEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     EDT +  A +LL+ H I  L +VD     IG++   D+ +  
Sbjct: 152 MTKENLITAPEDTTIEQAKELLKNHRIEKLPLVDKDNNLIGLITIKDIEKVK 203


>gi|148381239|ref|YP_001255780.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 3502]
 gi|153932667|ref|YP_001385614.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 19397]
 gi|153937299|ref|YP_001389020.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. Hall]
 gi|148290723|emb|CAL84854.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 3502]
 gi|152928711|gb|ABS34211.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. ATCC 19397]
 gi|152933213|gb|ABS38712.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A
           str. Hall]
          Length = 484

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  +  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEGKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|149377477|ref|ZP_01895219.1| nucleotidyltransferase, CBS domain/cAMP binding protein
           [Marinobacter algicola DG893]
 gi|149358244|gb|EDM46724.1| nucleotidyltransferase, CBS domain/cAMP binding protein
           [Marinobacter algicola DG893]
          Length = 638

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLN 281
            ++  +  +     P+  A+  + E   G + + D+ +   GI T  D+       K   
Sbjct: 176 RYAIRNPIVCSPDLPVRKAVARMHENSVGSIVITDDKRHPTGIFTLRDLRTMVAEEKGPL 235

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  VM +NP  +  +     A  L+ +H+ + + VVDD  + IG+V   DL
Sbjct: 236 DTPIGQVMTRNPCCLTANADAFEAAMLMAEHHFAHICVVDDDHRLIGMVSERDL 289



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +E   I+NP V   D  +  A+  + ++++  +++ DD +   GI    DL
Sbjct: 171 DTPLERYAIRNPIVCSPDLPVRKAVARMHENSVGSIVITDDKRHPTGIFTLRDL 224


>gi|15922703|ref|NP_378372.1| hypothetical protein ST2371 [Sulfolobus tokodaii str. 7]
 gi|15623493|dbj|BAB67481.1| 131aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 131

 Score = 99.2 bits (246), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 1/113 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
                +      + +A  I+ ++  G + +VD+  K  GI+TE D+      ++     V
Sbjct: 8   TKKPVIASKDISIREAAKIMKKEEVGSLVIVDKDYKAIGIVTERDLLYAIADEIPLDKPV 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++M +NP  I E++ ++ A+ L+    I  L+VVD   K  G++   D+ R 
Sbjct: 68  SEIMSQNPVTIEENSDISEAVALMTSREIRHLIVVDHDGKVKGVISIRDVARA 120



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  ++ K P +  +D  +  A +++++  +  L++VD   KAIGIV   DLL
Sbjct: 3   VSQLITKKPVIASKDISIREAAKIMKKEEVGSLVIVDKDYKAIGIVTERDLL 54



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   ++    + +A+ +++ +    + VVD   K+KG+I+  D+ R    
Sbjct: 71  MSQNPVTIEENSDISEAVALMTSREIRHLIVVDHDGKVKGVISIRDVARAVGA 123


>gi|317014239|gb|ADU81675.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori
           Gambia94/24]
          Length = 481

 Score = 98.8 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEIAKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIQAHRTLADAKAIADNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|119774661|ref|YP_927401.1| CBS domain-containing protein [Shewanella amazonensis SB2B]
 gi|119767161|gb|ABL99731.1| CBS domain protein [Shewanella amazonensis SB2B]
          Length = 618

 Score = 98.8 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 57/136 (41%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
            + H G          S +       PL +     +  A  ++ + R   + V D   KL
Sbjct: 137 RLRHQGRFKAKELTTTSRISSLMTGSPLTIDCNHSIRQAAVMMRDARVSSLLVTDHH-KL 195

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+  R   +  + TL V   M +NP  I    L+  AM  + + NI  L V+ 
Sbjct: 196 CGILTDRDLRNRVLAEGFDGTLPVHQAMTRNPVTIGAGALVFEAMLAMSERNIHHLPVL- 254

Query: 322 DCQKAIGIVHFLDLLR 337
           +    +G++   D+LR
Sbjct: 255 EGDTPVGVISSTDILR 270


>gi|226227857|ref|YP_002761963.1| inosine-5'-monophosphate dehydrogenase [Gemmatimonas aurantiaca
           T-27]
 gi|226091048|dbj|BAH39493.1| inosine-5'-monophosphate dehydrogenase [Gemmatimonas aurantiaca
           T-27]
          Length = 496

 Score = 98.8 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 72/195 (36%), Gaps = 15/195 (7%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +  +    ++ L          +   P  SA M       +AIA+            VL
Sbjct: 30  PRHSLTHPREVTLHSRFTRGITLN--VPLASAAMDTVTESEMAIAMARY-----GAIGVL 82

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           H    +         V  S   + L          L +A+ ++   +   V +VD   +L
Sbjct: 83  HKNMSIDRQAAEVDRVKRSESGMILNPITLSPTASLREAVALMMRFKISGVPIVDGAGQL 142

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            GI+T  D+   F +DL+   + DVM  +        T L  A ++L +H I  L VVDD
Sbjct: 143 VGILTNRDL--QFERDLDR-PLRDVMTGQGLITAPVGTTLDEAERILGKHRIEKLPVVDD 199

Query: 323 CQKAIGIVHFLDLLR 337
                G++   D+ +
Sbjct: 200 HGTLKGLITVKDIHK 214


>gi|154149366|ref|YP_001406470.1| inositol-5-monophosphate dehydrogenase [Campylobacter hominis ATCC
           BAA-381]
 gi|153805375|gb|ABS52382.1| inosine-5'-monophosphate dehydrogenase [Campylobacter hominis ATCC
           BAA-381]
          Length = 485

 Score = 98.8 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + L
Sbjct: 40  NTPIVSAAMDTVTETRTAIMMARLGGIG-----VIHKNMDIASQAKMVKRVKKSESGVIL 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    +  A+ +++E     V VVD+   L GI+T  D+   F  D+N L V + 
Sbjct: 95  DPISIKPNASIKSALDMMAEFHISGVPVVDDNGILIGILTNRDLR--FETDMNAL-VGEK 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++   + +  L +VD      G++   DL +
Sbjct: 152 MTKTPLITAPKGCTLDDAKEIFMNNKVEKLPIVDSNGHLEGLITIKDLKK 201


>gi|39935269|ref|NP_947545.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           CGA009]
 gi|39649121|emb|CAE27641.1| inosine monophosphate dehydrogenase [Rhodopseudomonas palustris
           CGA009]
          Length = 498

 Score = 98.8 bits (245), Expect = 9e-19,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 46  NIPIIASAMDTVTEARMAIAMAQAGGLGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV         KL GI+T  D+            V +
Sbjct: 105 ISPDAKLADALALMNQYGFSGIPVVTGAQGHGPGKLVGILTNRDVRFATDP---AQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A +LL QH I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDMEKA 213



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            + +++  V+ G    +A  +L + R   + VVD+  +  G+IT  D+ +     L +  
Sbjct: 163 MTHENLVTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKD 222

Query: 285 VE 286
            +
Sbjct: 223 AQ 224


>gi|192290879|ref|YP_001991484.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
 gi|192284628|gb|ACF01009.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           TIE-1]
          Length = 498

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 46  NIPIIASAMDTVTEARMAIAMAQAGGLGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV         KL GI+T  D+            V +
Sbjct: 105 ISPDAKLADALALMNQYGFSGIPVVTGAQGHGPGKLVGILTNRDVRFATDP---AQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A +LL QH I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDMEKA 213



 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 29/62 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            + +++  V+ G    +A  +L + R   + VVD+  +  G+IT  D+ +     L +  
Sbjct: 163 MTHENLVTVREGVSQGEAKKLLHQHRIEKLLVVDDQYRCVGLITVKDMEKAVAHPLASKD 222

Query: 285 VE 286
            +
Sbjct: 223 AQ 224


>gi|159029735|emb|CAO87813.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 899

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  IL       ++VVDE  +L G+I+  D+    H   +   V
Sbjct: 323 MSSPVRTIRPDTSISQAERILFRYGHSGLSVVDEQDRLVGVISRRDLDLALHHGFSRSPV 382

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  NPK I  DT L     L+  +++  L V+ +  + +GIV   D+LR
Sbjct: 383 KGYMTCNPKTITPDTSLQEIESLMVTYDLGRLPVL-ENGQLVGIVTRTDVLR 433



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  D+M    + I  DT ++ A ++L ++  S L VVD+  + +G++   DL
Sbjct: 316 SPTARDLMSSPVRTIRPDTSISQAERILFRYGHSGLSVVDEQDRLVGVISRRDL 369



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +   +     L +  +++     G + V+ E  +L GI+T  D+ R  H++
Sbjct: 389 NPKTITPDTSLQEIESLMVTYDLGRLPVL-ENGQLVGIVTRTDVLRQIHQN 438


>gi|320162383|ref|YP_004175608.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
 gi|319996237|dbj|BAJ65008.1| hypothetical protein ANT_29820 [Anaerolinea thermophila UNI-1]
          Length = 218

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                +  +    P+ +A+  + + +     VVD+  KL GI+T+ D+            
Sbjct: 6   RMSHPVLTITPDVPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLMNASPSEATTLS 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ ++VE VM + P  + EDT +  A +++  + I  L V+    + +GI+  
Sbjct: 66  VWEINYLLSRITVERVMTREPITVTEDTTVEEAARIMADNKIGGLPVL-RDNRLVGIITE 124

Query: 333 LDLLRF 338
            DL + 
Sbjct: 125 TDLFKI 130



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      I  D  +  A+  +RQ  +    VVD   K IGIV   DL+  
Sbjct: 3   VKERMSHPVLTITPDVPVQEALARMRQDKVRRYPVVDKKGKLIGIVTDSDLMNA 56



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +           V     + +A  I+++ + G + V+ +  +L GIITE D+F+ F +
Sbjct: 75  RITVERVMTREPITVTEDTTVEEAARIMADNKIGGLPVLRDN-RLVGIITETDLFKIFLE 133

Query: 279 DLNTLSVE 286
            L   +  
Sbjct: 134 MLGARTAG 141


>gi|296268610|ref|YP_003651242.1| inosine-5'-monophosphate dehydrogenase [Thermobispora bispora DSM
           43833]
 gi|296091397|gb|ADG87349.1| inosine-5'-monophosphate dehydrogenase [Thermobispora bispora DSM
           43833]
          Length = 492

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +A+A+            +LH    +         V  S      
Sbjct: 41  RIPLVSAAMDTVTEARMAVAMARQGGIG-----ILHRNLSIEEQAHQVDQVKRSEAGMVT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +   + +  R   V V DE   L GI+T  D+   F  D  +  V +V
Sbjct: 96  DPVTCTPDTTLAEVERLCATYRISGVPVTDENGVLVGIVTNRDMR--FETD-QSRPVREV 152

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P V          A +LLRQ+ +  L +VDD  +  G++   D ++
Sbjct: 153 MTPMPLVTAPVGVSREEAFRLLRQNKVEKLPIVDDAGRLRGLITVKDFIK 202


>gi|163846436|ref|YP_001634480.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222524210|ref|YP_002568681.1| CBS domain-containing membrane protein [Chloroflexus sp. Y-400-fl]
 gi|163667725|gb|ABY34091.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222448089|gb|ACM52355.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
          Length = 154

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  + +  PL +A+ ++ E     + VV +  +L+GIIT+GDI             
Sbjct: 19  MRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIMRVAGLDP 78

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               + L  + V +VM ++P  +  +T L  A  L+ ++ I  L V+D+ ++ IGI+   
Sbjct: 79  VDIAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITES 138

Query: 334 DLLRF 338
           DL   
Sbjct: 139 DLFEA 143



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 30/73 (41%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +              +    V     L +A  ++ E + G + V+DE +++ GIITE D
Sbjct: 80  DIAQALRNVKVYEVMTEDPIAVTPETSLREAALLMIENKIGGLPVIDENKRVIGIITESD 139

Query: 272 IFRNFHKDLNTLS 284
           +F    + L T  
Sbjct: 140 LFEALVQQLETHP 152



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M      I     L+ A+ L+R+H+I  L VV D  +  GI+   D+    I+
Sbjct: 19  MRTPAITINLAAPLSEALALMREHDIRRLPVVVDTGELRGIITQGDIRGADIM 71


>gi|188527324|ref|YP_001910011.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Shi470]
 gi|188143564|gb|ACD47981.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori Shi470]
 gi|308063381|gb|ADO05268.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Sat464]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|242279023|ref|YP_002991152.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio salexigens
           DSM 2638]
 gi|242121917|gb|ACS79613.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio salexigens
           DSM 2638]
          Length = 485

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 39/201 (19%), Positives = 80/201 (39%), Gaps = 17/201 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  +++++   + +  +         P  SA M       +AI +      
Sbjct: 8   ALTFDDVLLLPAYSEVLPDSVDVSAKLTEEITLGIPLVSAAMDTVTESKMAIQMARHGGV 67

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 V+H    +         V  S         +V     +  A+ +++E +     
Sbjct: 68  G-----VVHKNMSVRDQVREVERVKKSESGMVTDPIVVHPDDTVGKALDLMAEFKISGFP 122

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNI 314
           VV +G+ L GIIT  D+     +++    V +VM  +N   + + T    A + L  + I
Sbjct: 123 VV-KGEHLVGIITNRDVRFITDRNV---PVSEVMTSRNLVTVQKGTSTEEAKRHLHTNRI 178

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             L+VVD+  K  G++   D+
Sbjct: 179 EKLLVVDEENKLTGLITIKDI 199


>gi|67539092|ref|XP_663320.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
 gi|40743619|gb|EAA62809.1| hypothetical protein AN5716.2 [Aspergillus nidulans FGSC A4]
 gi|259484807|tpe|CBF81345.1| TPA: CBS and PB1 domain protein (AFU_orthologue; AFUA_1G06780)
           [Aspergillus nidulans FGSC A4]
          Length = 666

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/137 (25%), Positives = 60/137 (43%), Gaps = 7/137 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++
Sbjct: 90  KRSNPARANRTRKAPPGTVLALKPSSALQIKPSTTIAEAAQLMAAKREDCVLVTDDDDRI 149

Query: 264 KGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T  D+  R     L    ++V ++M KNP     DT  T A+ L+ +     L V+
Sbjct: 150 AGIFTAKDLAFRVVGAGLKARDITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 209

Query: 321 DDCQKAIGIVHFLDLLR 337
           D+ Q   G++   D+ +
Sbjct: 210 DENQDISGVL---DITK 223



 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ E     + V D    + GI T  DI  R     L+  T S
Sbjct: 284 MPPTTVSVRTTVKEAAALMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPATCS 342

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 343 VVRVMTPHPDFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMV---DVLKL 393


>gi|302390645|ref|YP_003826466.1| inosine-5'-monophosphate dehydrogenase [Thermosediminibacter oceani
           DSM 16646]
 gi|302201273|gb|ADL08843.1| inosine-5'-monophosphate dehydrogenase [Thermosediminibacter oceani
           DSM 16646]
          Length = 482

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            ++H    +    +    V  S   + +
Sbjct: 41  NIPIVSAAMDTVTEARLAIALAREGGIG-----IIHKNMSIEQQALEVDKVKRSEHGVIV 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ +++  R   V +  E  KL GIIT  DI     +D  +  ++DV
Sbjct: 96  DPFYLSPENTIGEAMELMARYRISGVPIT-ENGKLVGIITNRDIRF---EDDMSKKIKDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A  +L++H +  L +VD+     G++   D+ + 
Sbjct: 152 MTKENLVTAPVGTTLEEAKLILKKHKVEKLPLVDENFNLKGLITIKDIEKA 202


>gi|207092178|ref|ZP_03239965.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori
           HPKX_438_AG0C1]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|134045621|ref|YP_001097107.1| signal transduction protein [Methanococcus maripaludis C5]
 gi|132663246|gb|ABO34892.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C5]
          Length = 413

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             V         V++   +IDA   +         V++E  +L GIIT+ D+ R   +  
Sbjct: 61  QQVEDLMFKPFCVRMNTQVIDAAFEMINSGQRVAPVINENDELIGIITDYDVMRCASQSE 120

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + ++ +M K+P  I  D  +  A  L+ ++NI  L+V+D   K IG+V   D+++ 
Sbjct: 121 LLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLVVLDADGKPIGMVTEDDIVKK 180



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   + I   +  A +++ +   G + V+D   K  G++TE DI +   K 
Sbjct: 125 VKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLVVLDADGKPIGMVTEDDIVKKVFKP 184

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V +               ++ K      ED  +     L+ + +I  + +     
Sbjct: 185 KTKMTVGELTGDKMPRMAQPVSMIINKPLITADEDDSIAAVADLMEKQDIRGIPIF-KND 243

Query: 325 KAIGIVHFLDLLRF 338
              GIV  LD+L++
Sbjct: 244 ILRGIVTRLDILKY 257



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +  +   +  V    P+  A+ I+  ++F  + +  +      ++T  D+     
Sbjct: 1   MKEQAIDIATKDVVTVNPDTPISKAVGIMENRKFHNLIIEKDDDIY--LVTMHDL---LL 55

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     VED+M K P  +  +T +  A   +      V  V+++  + IGI+   D++R
Sbjct: 56  GNSVHQQVEDLMFK-PFCVRMNTQVIDAAFEMINSGQRVAPVINENDELIGIITDYDVMR 114


>gi|317182142|dbj|BAJ59926.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F57]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|166365960|ref|YP_001658233.1| hypothetical protein MAE_32190 [Microcystis aeruginosa NIES-843]
 gi|166088333|dbj|BAG03041.1| hypothetical protein MAE_32190 [Microcystis aeruginosa NIES-843]
          Length = 898

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  IL       ++VVDE  +L G+I+  D+    H   +   V
Sbjct: 323 MSSPVRTIRPDTSISQAERILFRYGHSGLSVVDEQDRLVGVISRRDLDLALHHGFSRSPV 382

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  NPK I  DT L     L+  +++  L V+ +  + +GIV   D+LR
Sbjct: 383 KGYMTCNPKTITPDTSLQEIESLMVTYDLGRLPVL-ENGQLVGIVTRTDVLR 433



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  D+M    + I  DT ++ A ++L ++  S L VVD+  + +G++   DL
Sbjct: 316 SPTARDLMSSPVRTIRPDTSISQAERILFRYGHSGLSVVDEQDRLVGVISRRDL 369



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +   +     L +  +++     G + V+ E  +L GI+T  D+ R  H++
Sbjct: 389 NPKTITPDTSLQEIESLMVTYDLGRLPVL-ENGQLVGIVTRTDVLRQIHQN 438


>gi|150388740|ref|YP_001318789.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus
           metalliredigens QYMF]
 gi|149948602|gb|ABR47130.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus
           metalliredigens QYMF]
          Length = 485

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V  S   + +
Sbjct: 42  NIPVMSAGMDTVTEAKMAIAMAREGGIG-----IIHKNMTIEEQALEVDKVKRSEHGVIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++   R   V +V E  KL GIIT  DI   F KD     + +V
Sbjct: 97  DPFFLSPDHQVEDALELMERYRISGVPIVVE-GKLVGIITNRDIR--FEKD-YQRPISEV 152

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+     LE   +  A Q+L  H I  L +VD      G++   D+ + 
Sbjct: 153 MTKDSLITALEGISMDEAQQILMAHKIEKLPIVDQNHNLKGLITIKDIEKA 203


>gi|156743707|ref|YP_001433836.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235035|gb|ABU59818.1| CBS domain containing membrane protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 162

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  V +  P+ +A+ ++ E     + VV +  +L+GIIT+GDI             
Sbjct: 24  MRAPAVTVNLAAPVSEALALMREHNVRRLPVVIDTGELRGIITQGDIRGADLLRVAGMDP 83

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  + V +VM ++P  +  +T L  A  L+  + I  L VVD+    +GI+   
Sbjct: 84  FEIADALRRIKVYEVMTEDPITVTPETSLREAAMLMIDNKIGGLPVVDEHNMVVGIITES 143

Query: 334 DLLRF 338
           DL   
Sbjct: 144 DLFEA 148



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 28/69 (40%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                    +    V     L +A  ++ + + G + VVDE   + GIITE D+F     
Sbjct: 92  RIKVYEVMTEDPITVTPETSLREAAMLMIDNKIGGLPVVDEHNMVVGIITESDLFEALVH 151

Query: 279 DLNTLSVED 287
            L    +E+
Sbjct: 152 VLERRDMEE 160


>gi|237752085|ref|ZP_04582565.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis
           ATCC BAA-430]
 gi|229376652|gb|EEO26743.1| inositol-5-monophosphate dehydrogenase [Helicobacter winghamensis
           ATCC BAA-430]
          Length = 483

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M     +  AIA+            ++H    + T       V  S   + +
Sbjct: 40  NAPLVSAAMDTVTEERTAIAMARLGGIG-----IIHKNMDILTQVALIKKVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVDE   L GI+T  D+   F  DL T  V+DV
Sbjct: 95  DPIYISPNSTLADAKEITDNYKISGVPVVDEHGSLIGILTNRDMR--FETDL-TRPVKDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P       T L  A  ++ +H I  L +V++     G++   D+ +
Sbjct: 152 MTKAPLITGRVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQK 201



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + +   +   ++G  L +A  I+++ +   + +V+E   LKG+IT  DI +   
Sbjct: 149 KDVMTKAPLITGRVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQKRIE 204


>gi|323341160|ref|ZP_08081407.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus ruminis ATCC
           25644]
 gi|323091354|gb|EFZ33979.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus ruminis ATCC
           25644]
          Length = 496

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLADNLKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMSIEQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          +++A  ++ + R   V +V+  E +K  GIIT  DI 
Sbjct: 87  VRKVKRSESGVIIDPFYLTPENSVLEADGLMRKYRISGVPIVETLENRKFCGIITNRDIR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D +T+ +  VM K N     E T L  A ++L+Q+ I  L +V+   + +G++  
Sbjct: 147 --FVED-HTVEIGKVMTKENLITAPEGTSLEKAEEILQQNKIEKLPLVNAEGQLVGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|217034124|ref|ZP_03439544.1| hypothetical protein HP9810_868g17 [Helicobacter pylori 98-10]
 gi|216943408|gb|EEC22864.1| hypothetical protein HP9810_868g17 [Helicobacter pylori 98-10]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|159906025|ref|YP_001549687.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159887518|gb|ABX02455.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 413

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             V         V++   +IDA   +         V+DE  +L GIIT+ D+ R   +  
Sbjct: 61  QQVEDLMFKPFCVRMNTQVIDAAFEMINSGQRVAPVIDENDELIGIITDYDVMRCAGQSE 120

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + ++ +M K+P  I  D  +  A  L+ ++NI  L+V+D   K IG+V   D+++ 
Sbjct: 121 LLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDTNGKPIGMVTEDDIVKK 180



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   + I   +  A +++ +   G + V+D   K  G++TE DI +   K 
Sbjct: 125 VKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDTNGKPIGMVTEDDIVKKVFKP 184

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V +               ++ K      ED  +     L+ + +I  + +     
Sbjct: 185 KTKMTVGELTGDKMPRMAQPVSMIINKPLITADEDESIAAVADLMEKQDIRGVPIF-KND 243

Query: 325 KAIGIVHFLDLLRF 338
              GIV  LD+L++
Sbjct: 244 ILRGIVTRLDILKY 257



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +  +   +  V    P+  A+ I+  ++F  + +  +      ++T  D+     
Sbjct: 1   MKEQVIDIATKDVVTVNPDTPISKAVGIMENRKFHNLIIEKDDDIY--LVTMHDL---LL 55

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     VED+M K P  +  +T +  A   +      V  V+D+  + IGI+   D++R
Sbjct: 56  GNSVHQQVEDLMFK-PFCVRMNTQVIDAAFEMINSGQRVAPVIDENDELIGIITDYDVMR 114


>gi|108563240|ref|YP_627556.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori HPAG1]
 gi|107837013|gb|ABF84882.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori HPAG1]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQLKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|317180593|dbj|BAJ58379.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F32]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|317178810|dbj|BAJ56598.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F30]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|308182989|ref|YP_003927116.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori PeCan4]
 gi|308065174|gb|ADO07066.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori PeCan4]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTARVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +   ++G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTARVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|169824006|ref|YP_001691617.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
 gi|303234329|ref|ZP_07320968.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
 gi|167830811|dbj|BAG07727.1| inositol-monophosphate dehydrogenase [Finegoldia magna ATCC 29328]
 gi|302494445|gb|EFL54212.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna BVS033A4]
          Length = 483

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + I  
Sbjct: 40  NIPMMSAGMDTVTESKMAIAMARQGGIG-----IIHKNMTIEEQAREVDRVKRSENGIIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     ++DA+ ++S  R   V +V E   L GI+T  D+   F KD   L + DV
Sbjct: 95  DPFYLSADDKIVDALKLMSHYRISGVPIVKEDMTLVGILTNRDVR--FVKD-EQLPIGDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M K N     E+  +  A++ +    I  L +VD+  K  G++   D
Sbjct: 152 MTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKD 198



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++        + +A+  +   +   + +VDE  KLKG+IT  D+ ++  
Sbjct: 149 GDVMTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKDVEKSIQ 204


>gi|126179514|ref|YP_001047479.1| inosine-5'-monophosphate dehydrogenase [Methanoculleus marisnigri
           JR1]
 gi|125862308|gb|ABN57497.1| inosine-5'-monophosphate dehydrogenase [Methanoculleus marisnigri
           JR1]
          Length = 488

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 57/165 (34%), Gaps = 5/165 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI +  +R       +   P  +               +   +
Sbjct: 44  NIPLVSAAMDTVTESVMAITM--AREGGIGVIHRNMPADREVAEVRVVKQAEDLIEREVV 101

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     + D   ++ +   G V V+ E  K+ GI++  DI R          +   M K
Sbjct: 102 AVGPEATVTDVERVMRQYGIGGVPVI-ENDKVIGIVSRRDI-RAILPKRGEAKITGYMTK 159

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 ED     A++ +  + +  L VVD     +GI+   D+L
Sbjct: 160 KLITASEDITAENALETMYANKVERLPVVDGEGCLVGIITMRDIL 204


>gi|308062150|gb|ADO04038.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori Cuz20]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTARVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +   ++G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTARVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|299143987|ref|ZP_07037067.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
 gi|298518472|gb|EFI42211.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp. oral
           taxon 386 str. F0131]
          Length = 483

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSAGMDTVTEANMAIAMAREGGIG-----IIHKNMSVEVQAKEVDKVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++   R   V +VDE  KL+GIIT  DI   F +DL+   + +V
Sbjct: 95  DPFSLSKNHTIADADRLMDTYRISGVPIVDENNKLEGIITNRDIR--FEQDLDK-KISEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N         L  A+++LR++ +  L ++DD     G++   D+
Sbjct: 152 MTKENLITGHVGISLDEALKILRRYKVEKLPLIDDDGLLKGLITIKDI 199


>gi|315586505|gb|ADU40886.1| IMP dehydrogenase [Helicobacter pylori 35A]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDVQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|170291096|ref|YP_001737912.1| signal transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170175176|gb|ACB08229.1| putative signal transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 161

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 6/109 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDV 288
           +    + +A  ++ E   G V V+ E  +L+GI+TE D+   +      +    + V ++
Sbjct: 30  RPDGTVYEAAKLMKENNIGSV-VIMEEGELRGIVTERDLITRYIAAEDGRRPEDVKVSEI 88

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+P  I ++T +  A +++ + NI  L+VV+   + +GI+   D+L+
Sbjct: 89  MTKDPITIRDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILK 137



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V +VM +N   +  D  +  A +L++++NI  ++++++  +  GIV   DL+
Sbjct: 15  RMKVSEVMNRNIITMRPDGTVYEAAKLMKENNIGSVVIMEE-GELRGIVTERDLI 68



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/101 (17%), Positives = 36/101 (35%), Gaps = 1/101 (0%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
                + +  IG  + +   E R   +E D    +   + G                  +
Sbjct: 37  EAAKLMKENNIGSVVIMEEGELRGIVTERDLITRYIAAEDGRRPEDVKVSEIMTKDPITI 96

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +    + +A  I+ EK    + VV+   ++ GII+  DI +
Sbjct: 97  RDNTDIDEAARIMIEKNIRRLIVVNYDGRVVGIISSRDILK 137


>gi|313835915|gb|EFS73629.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL037PA2]
 gi|314927239|gb|EFS91070.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL044PA1]
 gi|314970633|gb|EFT14731.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL037PA3]
 gi|328906138|gb|EGG25913.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium sp. P08]
          Length = 504

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 50/212 (23%), Positives = 73/212 (34%), Gaps = 26/212 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMVDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GI+T  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDRENLVGIVTNRDMRF---EDNPQRPIREVMTPAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LL  H I  L +VD   K  G+    D ++ 
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVKA 212


>gi|310817677|ref|YP_003950035.1| CBS domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390749|gb|ADO68208.1| CBS domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 387

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF--HKDLNTLSVEDVMI 290
           +    L +   ++ ++  G V +VD    L GI+T+ D+  R F  HK    L   DVM 
Sbjct: 255 RRDSSLREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLVIRAFTGHKSPEQLRAGDVMT 314

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + + +  D  L   + ++ +  I  + VVD     IGI+   D+
Sbjct: 315 DDVECVHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGDI 359



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+  ++M +  K +  D+ L    QL++  +   + +VD     IGIV   DL+
Sbjct: 241 LTAREIMTRGVKTLRRDSSLREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLV 294



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V     L   I ++ +++   + VVD    L GII+ GDI      D       +
Sbjct: 320 VHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGDIAHRADYDEEVQEALE 374


>gi|210135029|ref|YP_002301468.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori P12]
 gi|210132997|gb|ACJ07988.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori P12]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|15611835|ref|NP_223486.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori J99]
 gi|12230202|sp|Q9ZL14|IMDH_HELPJ RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|4155333|gb|AAD06347.1| INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE [Helicobacter pylori J99]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|115380428|ref|ZP_01467417.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
 gi|115362562|gb|EAU61808.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
          Length = 400

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF--HKDLNTLSVEDVMI 290
           +    L +   ++ ++  G V +VD    L GI+T+ D+  R F  HK    L   DVM 
Sbjct: 289 RRDSSLREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLVIRAFTGHKSPEQLRAGDVMT 348

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + + +  D  L   + ++ +  I  + VVD     IGI+   D+
Sbjct: 349 DDVECVHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGDI 393



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+  ++M +  K +  D+ L    QL++  +   + +VD     IGIV   DL+
Sbjct: 275 LTAREIMTRGVKTLRRDSSLREVAQLMKDEDCGAVPIVDGTNALIGIVTDRDLV 328



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 21/47 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           V     L   I ++ +++   + VVD    L GII+ GDI      D
Sbjct: 354 VHPDEDLFSIIAMMGKRQIRRIPVVDRDDHLIGIISLGDIAHRADYD 400


>gi|308184616|ref|YP_003928749.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori SJM180]
 gi|308060536|gb|ADO02432.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori SJM180]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|332673365|gb|AEE70182.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 83]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|58261288|ref|XP_568054.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57230136|gb|AAW46537.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 831

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 7/132 (5%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GGK  +       V     S  L V  G  + DA  + + KR  CV VVDE + L GI T
Sbjct: 197 GGKRSSKRPQKGTVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFT 256

Query: 269 EGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
             D+         D  + SV  +M KNP V  + T  T A+QL+       L V ++   
Sbjct: 257 AKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGD 316

Query: 326 AIGIVHFLDLLR 337
            +G++   D+ +
Sbjct: 317 VVGLL---DITK 325



 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---------------KLKGI 266
            V+ +  + P V     + +A  ++ E+R   V V++                  K+ GI
Sbjct: 386 TVIDTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGI 445

Query: 267 ITEGDI-FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            T  DI  R     L+    SV  VM  +P       ++  A++ +   +   L VV+  
Sbjct: 446 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEAD 505

Query: 324 QKAIGIVHFLDLLRF 338
            + IGIV   D+L+ 
Sbjct: 506 GRLIGIV---DVLKL 517



 Score = 36.4 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D  +      L         VM              + DA+  +    +  + VV+
Sbjct: 446 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTA--PPTMVVQDALKKMHNGHYLNLPVVE 503

Query: 259 EGQKLKGII 267
              +L GI+
Sbjct: 504 ADGRLIGIV 512


>gi|15645448|ref|NP_207622.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori 26695]
 gi|2497358|sp|P56088|IMDH_HELPY RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|2313963|gb|AAD07879.1| inosine-5'-monophosphate dehydrogenase (guaB) [Helicobacter pylori
           26695]
          Length = 481

 Score = 98.8 bits (245), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|302380044|ref|ZP_07268523.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
           ACS-171-V-Col3]
 gi|302312270|gb|EFK94272.1| inosine-5'-monophosphate dehydrogenase [Finegoldia magna
           ACS-171-V-Col3]
          Length = 483

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 65/167 (38%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + I  
Sbjct: 40  NIPMMSAGMDTVTESKMAIAMARQGGIG-----IIHKNMTIEEQAREVDRVKRSENGIIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     ++DA+ ++S  R   V +V E   L GI+T  D+   F KD   L + DV
Sbjct: 95  DPFYLSADDKIVDALKLMSHYRISGVPIVKEDMTLVGILTNRDVR--FVKD-EQLPIGDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M K N     E+  +  A++ +    I  L +VD+  K  G++   D
Sbjct: 152 MTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKD 198



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + D++        + +A+  +   +   + +VDE  KLKG+IT  D+ ++  
Sbjct: 149 GDVMTKDNLITGHENISMDEALEKMMNAKIEKLPIVDENFKLKGLITTKDVEKSIQ 204


>gi|217967879|ref|YP_002353385.1| hypothetical protein [Dictyoglomus turgidum DSM 6724]
 gi|217336978|gb|ACK42771.1| CBS domain containing protein [Dictyoglomus turgidum DSM 6724]
          Length = 845

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  I+ +  +G + V +E  KL GII+  DI +  +  L    V
Sbjct: 317 MSYPVVTISPDISVKEAFKIMMKHGYGGLCV-EENGKLVGIISRRDIEKAINLKLTKKKV 375

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M K    +  +T +    ++L + NI  + VVD   K +GI+   D+LRF
Sbjct: 376 KSFMSKPVITVTPETPIWEIEKILVEKNIGRVPVVDRD-KIVGIITRQDILRF 427



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + ++  +D      +D+M      I  D  +  A +++ +H    L  V++  K +GI+ 
Sbjct: 303 LKKHLPRDFL---AKDIMSYPVVTISPDISVKEAFKIMMKHGYGGL-CVEENGKLVGIIS 358

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 359 RRDIEKA 365



 Score = 42.6 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +                +  V    P+ +   IL EK  G V VVD   K+ GIIT  
Sbjct: 364 KAINLKLTKKKVKSFMSKPVITVTPETPIWEIEKILVEKNIGRVPVVDRD-KIVGIITRQ 422

Query: 271 DIFR 274
           DI R
Sbjct: 423 DILR 426


>gi|317012640|gb|ADU83248.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori
           Lithuania75]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQLKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|45358579|ref|NP_988136.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|44921337|emb|CAF30572.1| Conserved Hypothetical protein with 4 CBS domains [Methanococcus
           maripaludis S2]
          Length = 413

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 57/120 (47%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             V         VK+   +IDA   +         V+DE  KL GIIT+ D+ +   +  
Sbjct: 61  QQVEDLMFRPFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMKCAAESE 120

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + ++ +M K+P  I  D  +  A  L+ ++NI  L+V+D   K IG+V   D+++ 
Sbjct: 121 LLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKK 180



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 49/134 (36%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   + I   +  A +++ +   G + V+D   K  G++TE DI +   K 
Sbjct: 125 VKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDMDGKPIGMVTEDDIVKKVFKP 184

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V +               ++ K          +    ++L Q +I  + +     
Sbjct: 185 KTKMTVGELTGNKVPRMAQPVSMIINKPLITANIGDSVAEVAEILEQQDIRGIPIF-KND 243

Query: 325 KAIGIVHFLDLLRF 338
              GIV  LD+L++
Sbjct: 244 TLRGIVTRLDILKY 257



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 52/120 (43%), Gaps = 6/120 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +  +   +  V    P+  A+  +  K+F  + +V++   +  ++T  D+     
Sbjct: 1   MKEQVIDIATKDVVTVSPDTPISKAVGTMENKKFHNL-IVEKDDDIY-LVTMHDL---LL 55

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     VED+M + P  +  +T +  A   +      V  V+D+  K IGI+   D+++
Sbjct: 56  GNSVHQQVEDLMFR-PFCVKMNTQVIDAAFEMINSGQRVAPVIDENDKLIGIITDYDVMK 114


>gi|325847125|ref|ZP_08169951.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
 gi|325481097|gb|EGC84142.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus hydrogenalis
           ACS-025-V-Sch4]
          Length = 499

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSASMDTVTESKMAIAMARQGGIG-----IIHKNMSIEEQAKEVDRVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A+ I++  R   V +VD+   LKGI+T  D+   F  D N + ++D+
Sbjct: 95  DPFYLKADNILKEALQIMANYRISGVPIVDDQMTLKGILTNRDVR--FQNDEN-VKIDDI 151

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+  ++      +  A++ +    +  L +VDD  K  G++   D+
Sbjct: 152 MTKDGLIVGHVGISMEDAVKKMESGKVEKLPIVDDDYKLKGLITIKDI 199


>gi|261837940|gb|ACX97706.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 51]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +   L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHVHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|208434743|ref|YP_002266409.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori G27]
 gi|208432672|gb|ACI27543.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori G27]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHKTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|254437635|ref|ZP_05051129.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
 gi|198253081|gb|EDY77395.1| hypothetical protein OA307_2505 [Octadecabacter antarcticus 307]
          Length = 168

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDL 280
             S            + DA+T +SEK FG V VVD  +K+ G++TE D+         D 
Sbjct: 6   YKSKQRPLTCSPDTSIFDAVTSMSEKNFGAVIVVDPDKKVLGVVTERDVMNKLVALELDA 65

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +V D+M K+P+V  E   +   ++++       L VVDD  +   +    D +
Sbjct: 66  RKTAVSDIMTKDPRVASESDDMLDWLRIMSNERFRRLPVVDDNGQIKAVFTQGDFV 121


>gi|154175518|ref|YP_001407770.1| inosine 5'-monophosphate dehydrogenase [Campylobacter curvus
           525.92]
 gi|112802503|gb|EAT99847.1| inosine-5'-monophosphate dehydrogenase [Campylobacter curvus
           525.92]
          Length = 482

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    +         V  S   + +
Sbjct: 40  NIPIVSAAMDTVTEHRAAIMMARLGGIG-----VIHKNMDIEAQAKEVRRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + +A++++S+     V VVDE  KL GI+T  D+   F  D + L V+D 
Sbjct: 95  DPIFIKPEASVGEALSLMSDLHISGVPVVDEEHKLIGILTNRDLR--FETDKSVL-VKDR 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++  Q+ +  L +VD+  K  G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDENGKLDGLITIKDLKK 201



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
               +   +     GC L DA  I S+ R   + +VDE  KL G+IT  D+ + 
Sbjct: 149 KDRMTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDENGKLDGLITIKDLKKR 202


>gi|261839352|gb|ACX99117.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori 52]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|134115681|ref|XP_773554.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50256180|gb|EAL18907.1| hypothetical protein CNBI1680 [Cryptococcus neoformans var.
           neoformans B-3501A]
          Length = 831

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 7/132 (5%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GGK  +       V     S  L V  G  + DA  + + KR  CV VVDE + L GI T
Sbjct: 197 GGKRSSKRPQKGTVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFT 256

Query: 269 EGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
             D+         D  + SV  +M KNP V  + T  T A+QL+       L V ++   
Sbjct: 257 AKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGD 316

Query: 326 AIGIVHFLDLLR 337
            +G++   D+ +
Sbjct: 317 VVGLL---DITK 325



 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---------------KLKGI 266
            V+ +  + P V     + +A  ++ E+R   V V++                  K+ GI
Sbjct: 386 TVIDTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGI 445

Query: 267 ITEGDI-FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            T  DI  R     L+    SV  VM  +P       ++  A++ +   +   L VV+  
Sbjct: 446 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEAD 505

Query: 324 QKAIGIVHFLDLLRF 338
            + IGIV   D+L+ 
Sbjct: 506 GRLIGIV---DVLKL 517



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D  +      L         VM              + DA+  +    +  + VV+
Sbjct: 446 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTA--PPTMVVQDALKKMHNGHYLNLPVVE 503

Query: 259 EGQKLKGII 267
              +L GI+
Sbjct: 504 ADGRLIGIV 512


>gi|295395136|ref|ZP_06805344.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium mcbrellneri
           ATCC 49030]
 gi|294971898|gb|EFG47765.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium mcbrellneri
           ATCC 49030]
          Length = 508

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 46/213 (21%), Positives = 73/213 (34%), Gaps = 29/213 (13%)

Query: 146 SENKSVVACHADIVLTLPKEPESCP-------------HGLAPTTSAIMQLAIGDALAIA 192
               S+     D VL LP + +  P                 P  SA M       +AIA
Sbjct: 12  ENPFSLTGLTYDDVLLLPGDTDVIPSEASTRTRLTRELDINIPLISAAMDTVTESRMAIA 71

Query: 193 LLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           +          RN S+ D        +   +                +     L +   +
Sbjct: 72  MARIGGIGIIHRNLSKED--------QAAQVDYVKRSESGMITDPVTITADKTLQELDEM 123

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTV 304
             + R   + VVD+   L GIIT  D+      +  T +V +VM K+P +          
Sbjct: 124 CGQYRISGLPVVDDNDVLVGIITNRDLRFVPRAEFTTTTVGEVMTKSPLITAPVGVSSEE 183

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A +LL +H I  L +VDD     G++   D ++
Sbjct: 184 AFELLAEHKIEKLPLVDDNNVIRGLITVKDFVK 216


>gi|29377734|ref|NP_816888.1| inosine 5'-monophosphate dehydrogenase [Enterococcus faecalis V583]
 gi|229547171|ref|ZP_04435896.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX1322]
 gi|229550741|ref|ZP_04439466.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis ATCC
           29200]
 gi|255971510|ref|ZP_05422096.1| IMP dehydrogenase [Enterococcus faecalis T1]
 gi|255974460|ref|ZP_05425046.1| IMP dehydrogenase [Enterococcus faecalis T2]
 gi|256618567|ref|ZP_05475413.1| IMP dehydrogenase [Enterococcus faecalis ATCC 4200]
 gi|256761815|ref|ZP_05502395.1| IMP dehydrogenase [Enterococcus faecalis T3]
 gi|256854942|ref|ZP_05560303.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis T8]
 gi|256957055|ref|ZP_05561226.1| IMP dehydrogenase [Enterococcus faecalis DS5]
 gi|256960919|ref|ZP_05565090.1| IMP dehydrogenase [Enterococcus faecalis Merz96]
 gi|256963943|ref|ZP_05568114.1| IMP dehydrogenase [Enterococcus faecalis HIP11704]
 gi|257078732|ref|ZP_05573093.1| IMP dehydrogenase [Enterococcus faecalis JH1]
 gi|257081308|ref|ZP_05575669.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           E1Sol]
 gi|257083966|ref|ZP_05578327.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis Fly1]
 gi|257087796|ref|ZP_05582157.1| IMP dehydrogenase [Enterococcus faecalis D6]
 gi|257088441|ref|ZP_05582802.1| IMP dehydrogenase [Enterococcus faecalis CH188]
 gi|257417383|ref|ZP_05594377.1| IMP dehydrogenase [Enterococcus faecalis AR01/DG]
 gi|257418880|ref|ZP_05595874.1| IMP dehydrogenase [Enterococcus faecalis T11]
 gi|257421305|ref|ZP_05598295.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis X98]
 gi|293384814|ref|ZP_06630659.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis R712]
 gi|293388236|ref|ZP_06632755.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis S613]
 gi|294781209|ref|ZP_06746556.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           PC1.1]
 gi|307277352|ref|ZP_07558450.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2134]
 gi|307286508|ref|ZP_07566607.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0109]
 gi|307289981|ref|ZP_07569907.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0411]
 gi|312901341|ref|ZP_07760622.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0470]
 gi|312902988|ref|ZP_07762177.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0635]
 gi|312908856|ref|ZP_07767795.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           512]
 gi|312952974|ref|ZP_07771830.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0102]
 gi|29345202|gb|AAO82958.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis V583]
 gi|229304174|gb|EEN70170.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis ATCC
           29200]
 gi|229307753|gb|EEN73740.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX1322]
 gi|255962528|gb|EET95004.1| IMP dehydrogenase [Enterococcus faecalis T1]
 gi|255967332|gb|EET97954.1| IMP dehydrogenase [Enterococcus faecalis T2]
 gi|256598094|gb|EEU17270.1| IMP dehydrogenase [Enterococcus faecalis ATCC 4200]
 gi|256683066|gb|EEU22761.1| IMP dehydrogenase [Enterococcus faecalis T3]
 gi|256709455|gb|EEU24502.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis T8]
 gi|256947551|gb|EEU64183.1| IMP dehydrogenase [Enterococcus faecalis DS5]
 gi|256951415|gb|EEU68047.1| IMP dehydrogenase [Enterococcus faecalis Merz96]
 gi|256954439|gb|EEU71071.1| IMP dehydrogenase [Enterococcus faecalis HIP11704]
 gi|256986762|gb|EEU74064.1| IMP dehydrogenase [Enterococcus faecalis JH1]
 gi|256989338|gb|EEU76640.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           E1Sol]
 gi|256991996|gb|EEU79298.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis Fly1]
 gi|256995826|gb|EEU83128.1| IMP dehydrogenase [Enterococcus faecalis D6]
 gi|256997253|gb|EEU83773.1| IMP dehydrogenase [Enterococcus faecalis CH188]
 gi|257159211|gb|EEU89171.1| IMP dehydrogenase [Enterococcus faecalis ARO1/DG]
 gi|257160708|gb|EEU90668.1| IMP dehydrogenase [Enterococcus faecalis T11]
 gi|257163129|gb|EEU93089.1| inosine-5`-monophosphate dehydrogenase [Enterococcus faecalis X98]
 gi|291077896|gb|EFE15260.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis R712]
 gi|291082383|gb|EFE19346.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis S613]
 gi|294451672|gb|EFG20127.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           PC1.1]
 gi|306498975|gb|EFM68467.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0411]
 gi|306502381|gb|EFM71658.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0109]
 gi|306505986|gb|EFM75158.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2134]
 gi|310625294|gb|EFQ08577.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           512]
 gi|310629115|gb|EFQ12398.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0102]
 gi|310633656|gb|EFQ16939.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0635]
 gi|311291574|gb|EFQ70130.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0470]
 gi|315026611|gb|EFT38543.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2137]
 gi|315030105|gb|EFT42037.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4000]
 gi|315033598|gb|EFT45530.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0017]
 gi|315036263|gb|EFT48195.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0027]
 gi|315155040|gb|EFT99056.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0043]
 gi|315165667|gb|EFU09684.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1302]
 gi|315168474|gb|EFU12491.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1341]
 gi|315172091|gb|EFU16108.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1342]
 gi|315174224|gb|EFU18241.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1346]
 gi|315576186|gb|EFU88377.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0309B]
 gi|315579765|gb|EFU91956.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0630]
 gi|315582997|gb|EFU95188.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0309A]
 gi|323479200|gb|ADX78639.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis 62]
          Length = 493

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPLMSASMDTVTDSNMAIAMARQGGLG-----VVHKNMTVAQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S  R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPTNLVADAEELMSRYRISGVPIVETMENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    + +E+VM K +       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 FVTD---YQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 159 MTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDIEKVIE 211


>gi|298675258|ref|YP_003727008.1| homoserine O-acetyltransferase [Methanohalobium evestigatum Z-7303]
 gi|298288246|gb|ADI74212.1| homoserine O-acetyltransferase [Methanohalobium evestigatum Z-7303]
          Length = 489

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + I  +K G  + +A  ++ EK    + +V    KL G++T  DI ++    L + ++
Sbjct: 375 MIEDIATIKEGISIDEAARVMFEKEITHLPLVSSDSKLVGLVTSWDISKSIA--LKSDNL 432

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E++M KN      D  +  A + +   +IS L V+D  ++ IG+V   D+ R 
Sbjct: 433 EEIMTKNVVTARPDEPIEKAAEKMESKDISALPVIDKDRRVIGMVTSEDISRL 485



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 33/68 (48%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +    +  L+   V D+MI++   I E   +  A +++ +  I+ L +V    K +G+
Sbjct: 356 GQLNYVLNNFLSHTYVSDIMIEDIATIKEGISIDEAARVMFEKEITHLPLVSSDSKLVGL 415

Query: 330 VHFLDLLR 337
           V   D+ +
Sbjct: 416 VTSWDISK 423



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 22/45 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +   P+  A   +  K    + V+D+ +++ G++T  DI R   +
Sbjct: 444 RPDEPIEKAAEKMESKDISALPVIDKDRRVIGMVTSEDISRLIEE 488


>gi|288958934|ref|YP_003449275.1| IMP dehydrogenase [Azospirillum sp. B510]
 gi|288911242|dbj|BAI72731.1| IMP dehydrogenase [Azospirillum sp. B510]
          Length = 492

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 67/174 (38%), Gaps = 17/174 (9%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  S+ M       LAIA+ ++         V+H    +         V      + + 
Sbjct: 44  IPLMSSAMDTVTESRLAIAMAQAGGIG-----VVHRNLTIEQQAEEVRKVKRFESGMVVN 98

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVD-----EGQKLKGIITEGDIFRNFHKDLNTLS 284
              +     L DA+ ++++ R   + VV         KL G++T  D+            
Sbjct: 99  PITITPDATLADALQLMADHRISGIPVVASRDQLGSGKLVGMLTNRDVRFATDP---KQP 155

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M K+   + E        +LL QH I  L+VVD+  + IG+V   D+ + 
Sbjct: 156 VSELMTKDLVTVREGVSQEEGKRLLHQHRIEKLLVVDEDYRCIGLVTVKDIEKA 209


>gi|282882142|ref|ZP_06290783.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus lacrimalis
           315-B]
 gi|281298172|gb|EFA90627.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus lacrimalis
           315-B]
          Length = 483

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       ++IA+            ++H    +    +    V  S   +  
Sbjct: 40  NIPLMSAGMDTVTEYRMSIAMAREGGIG-----IIHKNMSIQEQALEVDKVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++   +   V ++D+  +L+GIIT  DI   F  D N   +++V
Sbjct: 95  DPFSLSKNHTIGDASELMERYKISGVPIIDDKGRLEGIITNRDIR--FETD-NKRKIKEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N         L  A+++L+ H I  L +VD      G++   D+
Sbjct: 152 MTSENLITGTPGISLEEALKILKGHKIEKLPLVDKNNILKGLITIKDI 199


>gi|295659197|ref|XP_002790157.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb01]
 gi|226281862|gb|EEH37428.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb01]
          Length = 671

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
                  +K    + +A  +++ KR  CV V DE +++ GI T  D+  R     +    
Sbjct: 98  KPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARD 157

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++ ++M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 158 VTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 209



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A  ++ E     + V D    + GI T  DI  R      D NT SV
Sbjct: 271 PPTTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPNTCSV 329

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 330 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 379



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 70/223 (31%), Gaps = 47/223 (21%)

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSENDFYVLHPGGKLG 214
           + L      +  P+      + +M     D + +   + R    F+  D      G  + 
Sbjct: 95  MALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIR 154

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--IT--EG 270
              V  +++M         +      DA+ ++  K F  + V+DE Q + GI  IT    
Sbjct: 155 ARDVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 212

Query: 271 DIFRNFHK---------------------DLNTLSVEDV------MI----------KNP 293
           D      +                     +     ++ V      M             P
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLNGLPP 272

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   T +  A  L+++++ + L+V D      GI    D++
Sbjct: 273 TTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIV 314


>gi|330799665|ref|XP_003287863.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
 gi|325082133|gb|EGC35626.1| hypothetical protein DICPUDRAFT_91991 [Dictyostelium purpureum]
          Length = 241

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 63/123 (51%), Gaps = 8/123 (6%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           + + ++   I  V     + DAI +++EKR G   VVD+  ++ GI +E D       DL
Sbjct: 103 NKIKNNLGRIVRVDEDSTVYDAIKVMNEKRVGATIVVDKNNRMTGIFSERDYLSKV--DL 160

Query: 281 NTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             L+     V+D+M      +  D+  +  + ++ + NI  L V+D+ ++ IG++   D+
Sbjct: 161 RGLTPRETLVKDIMSSKVITVSGDSGASKCLSIMTKRNIRHLPVLDN-KRLIGMLSIGDI 219

Query: 336 LRF 338
           +++
Sbjct: 220 VKY 222


>gi|258405112|ref|YP_003197854.1| inosine-5'-monophosphate dehydrogenase [Desulfohalobium retbaense
           DSM 5692]
 gi|257797339|gb|ACV68276.1| inosine-5'-monophosphate dehydrogenase [Desulfohalobium retbaense
           DSM 5692]
          Length = 485

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 45/205 (21%), Positives = 83/205 (40%), Gaps = 17/205 (8%)

Query: 143 AITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +T ++  ++  ++D+    + +  +         P  SA M       +AI++  +   
Sbjct: 8   GLTFDDVLLLPRYSDVLPDTVDVGTQLTPQIRLNVPLLSAAMDTVTESRMAISMARAGGI 67

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVA 255
                 ++H    +    +    V  S   + +    V+    +  A+ I+SE R   + 
Sbjct: 68  G-----IIHKNMTIDQQRLEVEKVKKSESGMIVSPVTVEPDYTIAQALDIMSEYRISGLP 122

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNI 314
           VV E   L GI+T  D+   F KDL   +V DVM  KN   +   T +  A + L    I
Sbjct: 123 VVTE-GHLVGIVTNRDVR--FVKDL-QTTVADVMTSKNLVTVPVGTTMEEAKKHLHASRI 178

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRFG 339
             L+VVD+     G++   D+ +  
Sbjct: 179 EKLLVVDEDNNLRGLITIKDIEKVK 203


>gi|325997706|gb|ADZ49914.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 2017]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIQAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|227555643|ref|ZP_03985690.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis HH22]
 gi|307268872|ref|ZP_07550237.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4248]
 gi|307273947|ref|ZP_07555157.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0855]
 gi|307283996|ref|ZP_07564166.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0860]
 gi|312979501|ref|ZP_07791183.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           516]
 gi|227175220|gb|EEI56192.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis HH22]
 gi|306503367|gb|EFM72616.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0860]
 gi|306509255|gb|EFM78315.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0855]
 gi|306514788|gb|EFM83338.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4248]
 gi|311287683|gb|EFQ66239.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis DAPTO
           516]
 gi|315148284|gb|EFT92300.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX4244]
 gi|315151249|gb|EFT95265.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0012]
 gi|315153734|gb|EFT97750.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0031]
 gi|315158671|gb|EFU02688.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0312]
 gi|315163394|gb|EFU07411.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX0645]
 gi|327536391|gb|AEA95225.1| IMP dehydrogenase [Enterococcus faecalis OG1RF]
          Length = 497

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 36  VDMSVQLAKNIKLNIPLMSASMDTVTDSNMAIAMARQGGLG-----VVHKNMTVAQQADE 90

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S  R   V +V+  E +KL GIIT  D+ 
Sbjct: 91  VRKVKRSESGVIIDPFFLTPTNLVADAEELMSRYRISGVPIVETMENRKLVGIITNRDMR 150

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    + +E+VM K +       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 151 FVTD---YQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITI 207

Query: 333 LDL 335
            D+
Sbjct: 208 KDI 210



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 163 MTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDIEKVIE 215


>gi|317142635|ref|XP_001818994.2| CBS and PB1 domain protein [Aspergillus oryzae RIB40]
          Length = 666

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 22/198 (11%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +   +  P+   +      P             ++ A  + +N S+ D  +         
Sbjct: 28  SASHIPRPRPETASS---TPNPHTPSSDIGSSTMSAASRQRQNQSKRDEAIRRKMEADLN 84

Query: 216 LFVCASDVMHSGDSIP-------------LVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
               A    H     P              +K    + +A  +++ KR  CV V D+  +
Sbjct: 85  KKKQAPTRAHRSRKAPPGTVLALKPSQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDR 144

Query: 263 LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + GI T  D+        +    ++V ++M KNP     DT  T A+ L+ +     L V
Sbjct: 145 IAGIFTAKDLAFRVVGAGQKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPV 204

Query: 320 VDDCQKAIGIVHFLDLLR 337
           +D+ Q   G++   D+ +
Sbjct: 205 MDENQDISGVL---DITK 219



 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 281 PPVTVSVRTSVKDAAAMMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCSV 339

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 340 VRVMTPHPDFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMV---DVLKL 389


>gi|124515288|gb|EAY56798.1| Inosine-5'-monophosphate dehydrogenase [Leptospirillum rubarum]
          Length = 489

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 62/164 (37%), Gaps = 6/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIAL             L P  +   +                
Sbjct: 42  NIPIISSAMDTVTEARLAIALAREGGIGIIH-RALSPEEQAHEVDKVKKSESGMITDPIT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-K 291
           ++    + +A+ I++  R   + V+ + +KL GI+T  D+      +     V DVM  +
Sbjct: 101 IRPDQTVREALNIMATYRISGIPVI-KNRKLVGIVTNRDLRFEMDGN---RKVSDVMTSR 156

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   T L  A  L ++H+I  L VVD+  +  G++   D+
Sbjct: 157 KLVTAPVGTTLEAAKDLFQKHHIEKLPVVDEKNELQGLITIKDI 200


>gi|296119585|ref|ZP_06838143.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Corynebacterium ammoniagenes DSM 20306]
 gi|295967468|gb|EFG80735.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Corynebacterium ammoniagenes DSM 20306]
          Length = 618

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMI 290
                 + +A   + E     + V+D    L GIIT+ D+  R   + + T   V DVM 
Sbjct: 165 CPPDLSIREAAQRMEEYNVSSLLVLDRD-TLLGIITDRDLRGRVVAEGIETTCPVSDVMT 223

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  ++L   A+ L+ +  I  L VVD+     GIV   D+ R 
Sbjct: 224 TKLLTLSSESLAMEALMLMSERKIHHLPVVDE-GTVTGIVTQNDIARL 270



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++ +  + DV I  P+    D  +  A Q + ++N+S L+V+D     +GI+   DL
Sbjct: 148 NVLSTHIHDVKIAKPRSCPPDLSIREAAQRMEEYNVSSLLVLDRD-TLLGIITDRDL 203



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           ++A+ ++SE++   + VVDE   + GI+T+ DI R  H D   L+ +
Sbjct: 236 MEALMLMSERKIHHLPVVDE-GTVTGIVTQNDIARLLHNDPVFLTAD 281


>gi|284173895|ref|ZP_06387864.1| hypothetical protein Ssol98_04450 [Sulfolobus solfataricus 98/2]
          Length = 129

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +    +  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +   
Sbjct: 9   YMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGKSLDT 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 68  IAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 122



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      +  +T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 6   VKEYMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 58



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 80  IKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAID 124


>gi|317177339|dbj|BAJ55128.1| inositol-5-monophosphate dehydrogenase [Helicobacter pylori F16]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHTHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLEEARDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|325955035|ref|YP_004238695.1| inosine-5'-monophosphate dehydrogenase [Weeksella virosa DSM 16922]
 gi|323437653|gb|ADX68117.1| inosine-5'-monophosphate dehydrogenase [Weeksella virosa DSM 16922]
          Length = 486

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL      S      +H    +    V    V  S + +  
Sbjct: 44  NIPIVSAAMDTVSESKLAIALAREGGLS-----FIHKNMTIAEQAVQVDRVKRSENGMIA 98

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             I       L DA  ++ +     + V++E + L GIIT  DI   + K+++ L VEDV
Sbjct: 99  NPITLSRHHKLSDAEELMMQYSISGLPVIEEDRSLVGIITNRDIR--YQKNMDQL-VEDV 155

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K   +  + +T L  A ++L ++ I  L +VDD  K IG++   D+
Sbjct: 156 MTKENIITSDINTDLDKAKEILLRNRIEKLPIVDDNNKLIGLITIKDI 203


>gi|84616861|emb|CAJ13755.1| conserved hypothetical protein [Desulfococcus multivorans]
          Length = 309

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               +  V I   + DA+ ++       + V+D G+KL GIIT+ D+ R    D      
Sbjct: 85  MSRRLITVDIDAAMADAVKLMKTNDIHLLPVLD-GEKLSGIITDRDLKRASASDATALEM 143

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ + V D+M +    +  DT +  A ++L +  IS   VVDD  + +G++   
Sbjct: 144 YELIYLLSKIRVSDIMTRKIITLAPDTTVEEAAEVLLKQKISGAPVVDDAGRLLGVITKS 203

Query: 334 DLLR 337
           DL R
Sbjct: 204 DLFR 207



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 37/73 (50%), Gaps = 4/73 (5%)

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +G   RN     +  + + V++ M +    +  D  +  A++L++ ++I +L V+D  +K
Sbjct: 62  DGHRKRNITYIGEGGDLMLVKNWMSRRLITVDIDAAMADAVKLMKTNDIHLLPVLD-GEK 120

Query: 326 AIGIVHFLDLLRF 338
             GI+   DL R 
Sbjct: 121 LSGIITDRDLKRA 133



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 23/42 (54%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + +A  +L +++     VVD+  +L G+IT+ D+FR  
Sbjct: 168 PDTTVEEAAEVLLKQKISGAPVVDDAGRLLGVITKSDLFRML 209


>gi|307637521|gb|ADN79971.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 908]
 gi|325996110|gb|ADZ51515.1| Inosine-5'-monophosphate dehydrogenase [Helicobacter pylori 2018]
          Length = 481

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIQAHRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|238501480|ref|XP_002381974.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
 gi|220692211|gb|EED48558.1| CBS and PB1 domain protein [Aspergillus flavus NRRL3357]
          Length = 666

 Score = 98.4 bits (244), Expect = 1e-18,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 22/198 (11%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +   +  P+   +      P             ++ A  + +N S+ D  +         
Sbjct: 28  SASHIPRPRPETASS---TPNPHTPSSDIGSSTMSAASRQRQNQSKRDEAIRRKMEADLN 84

Query: 216 LFVCASDVMHSGDSIP-------------LVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
               A    H     P              +K    + +A  +++ KR  CV V D+  +
Sbjct: 85  KKKQAPTRAHRSRKAPPGTVLALKPSQALQIKPNMTIAEAAQLMAAKREDCVLVTDDDDR 144

Query: 263 LKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + GI T  D+        +    ++V ++M KNP     DT  T A+ L+ +     L V
Sbjct: 145 IAGIFTAKDLAFRVVGAGQKARDITVAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPV 204

Query: 320 VDDCQKAIGIVHFLDLLR 337
           +D+ Q   G++   D+ +
Sbjct: 205 MDENQDISGVL---DITK 219



 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 281 PPVTVSVRTSVKDAAAMMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCSV 339

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 340 VRVMTPHPDFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMV---DVLKL 389


>gi|186685839|ref|YP_001869035.1| signal transduction protein [Nostoc punctiforme PCC 73102]
 gi|186468291|gb|ACC84092.1| putative signal transduction protein with CBS domains [Nostoc
           punctiforme PCC 73102]
          Length = 154

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/140 (27%), Positives = 61/140 (43%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                 +V+   PL +AI IL+E+    + VVD+  KL GII+E D+             
Sbjct: 9   MSRDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLMWQETGVTPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + +DL+     +V +VM KNP  I  D  L  A  ++   ++  L 
Sbjct: 69  MFLDSVIYLKNPATYERDLHKALGQTVGEVMSKNPIAISPDKTLKEAATIMHDRSVHRLP 128

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D   + IGI+   D++R 
Sbjct: 129 VLDGTDQVIGILTRGDIIRA 148



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM ++P V+  +T L  A+Q+L + +IS L VVDD  K +GI+   DL+
Sbjct: 3   KTVADVMSRDPIVVRAETPLKEAIQILAERHISGLPVVDDVGKLVGIISETDLM 56



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +     L +A TI+ ++    + V+D   ++ GI+T GDI R    
Sbjct: 106 ISPDKTLKEAATIMHDRSVHRLPVLDGTDQVIGILTRGDIIRAMAA 151


>gi|327438155|dbj|BAK14520.1| IMP dehydrogenase/GMP reductase [Solibacillus silvestris StLB046]
          Length = 488

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            ++H    +      
Sbjct: 30  VNLSVNLTDNIKLNIPLISAGMDTVTESKMAIAMARQGGIG-----IIHKNMSIDEQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VEKVKRSENGVITNPFFLTPEHQVFDAEHLMGKYRISGVPIVNNMEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +L ++DVM K   +I    T L  A ++L+Q+ I  L +VD+  K  G++  
Sbjct: 145 FISD---YSLKIDDVMTKEDLIIAPVGTTLEDAEKILQQYKIEKLPLVDEAGKLTGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 29/56 (51%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           D + + + + +  +G  L DA  IL + +   + +VDE  KL G+IT  DI +   
Sbjct: 154 DDVMTKEDLIIAPVGTTLEDAEKILQQYKIEKLPLVDEAGKLTGLITIKDIEKVIE 209


>gi|281211188|gb|EFA85354.1| hypothetical protein PPL_02357 [Polysphondylium pallidum PN500]
          Length = 239

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLS--VEDVM 289
           +     +I+A+  +++ + G + V+D   +L+GI TE D + +   + L++    V++VM
Sbjct: 100 INSDQLIIEALRKMTQNKVGAIMVLDSNGQLEGIFTERDYVGKVALQGLSSRQSLVKEVM 159

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLR 337
            +  K I  D+ +   M ++       L VVD +  K +G+V   DL+R
Sbjct: 160 TRGVKTISADSCVVDTMHIMTNQRFRHLPVVDKESNKVLGMVSIQDLIR 208



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +    I  D L+  A++ + Q+ +  +MV+D   +  GI    D
Sbjct: 95  RELLTINSDQLIIEALRKMTQNKVGAIMVLDSNGQLEGIFTERD 138



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 39/86 (45%), Gaps = 3/86 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+        L +      +VM     +  +     ++D + I++ +RF  + VVD
Sbjct: 134 FTERDYVGKVALQGLSSRQSLVKEVM--TRGVKTISADSCVVDTMHIMTNQRFRHLPVVD 191

Query: 259 -EGQKLKGIITEGDIFRNFHKDLNTL 283
            E  K+ G+++  D+ R+ H +    
Sbjct: 192 KESNKVLGMVSIQDLIRSVHDNQKET 217


>gi|225680402|gb|EEH18686.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb03]
          Length = 676

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
                  +K    + +A  +++ KR  CV V DE +++ GI T  D+  R     +    
Sbjct: 98  KPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARD 157

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++ ++M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 158 VTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 209



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A  ++ E     + V D    + GI T  DI  R      D NT SV
Sbjct: 271 PPTTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPNTCSV 329

Query: 286 EDVMIKNPKVILEDTLLTVAMQLL---RQHNIS---------VLMVVDDCQKAIGIVHFL 333
             VM  +P     D  +  A++ +    +  ++          L V+++  + +G+V   
Sbjct: 330 VRVMTPHPDFAPTDMSIQAALRKMHGAEETGLTISKLDGHYLNLPVMNEAGEIVGMV--- 386

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 387 DVLKL 391



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 70/223 (31%), Gaps = 47/223 (21%)

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSENDFYVLHPGGKLG 214
           + L      +  P+      + +M     D + +   + R    F+  D      G  + 
Sbjct: 95  MALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIR 154

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--IT--EG 270
              V  +++M         +      DA+ ++  K F  + V+DE Q + GI  IT    
Sbjct: 155 ARDVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 212

Query: 271 DIFRNFHK---------------------DLNTLSVEDV------MI----------KNP 293
           D      +                     +     ++ V      M             P
Sbjct: 213 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLNGLPP 272

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   T +  A  L+++++ + L+V D      GI    D++
Sbjct: 273 TTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIV 314


>gi|182678890|ref|YP_001833036.1| inosine-5'-monophosphate dehydrogenase [Beijerinckia indica subsp.
           indica ATCC 9039]
 gi|182634773|gb|ACB95547.1| inosine-5'-monophosphate dehydrogenase [Beijerinckia indica subsp.
           indica ATCC 9039]
          Length = 496

 Score = 98.4 bits (244), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/184 (21%), Positives = 68/184 (36%), Gaps = 11/184 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L     S      P  SA M       LAIAL ++        +   P  +        
Sbjct: 33  DLRTRLTSQIQLNIPILSAAMDTVTEARLAIALAQAGGIG--VIHRNLPAEEQAEEVRKV 90

Query: 221 SDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVD-----EGQKLKGIITEGDIFR 274
                     P+ +     L DA+ ++       + VV+     +  KL GI+T  D+  
Sbjct: 91  KRYESGMVVNPITIFPDETLADALALMRRYGISGIPVVERRSGGKPGKLCGILTNRDVRF 150

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D     + ++M K+   + E      A +LL QH +  L+VVD+  + +G++   D
Sbjct: 151 A---DNPLQPISELMTKSLITVREGVSQDEARRLLHQHRLEKLLVVDEDFRCVGLITVKD 207

Query: 335 LLRF 338
           + + 
Sbjct: 208 MEKA 211


>gi|284036381|ref|YP_003386311.1| signal transduction protein with CBS domains [Spirosoma linguale
           DSM 74]
 gi|283815674|gb|ADB37512.1| putative signal transduction protein with CBS domains [Spirosoma
           linguale DSM 74]
          Length = 145

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     ++D + +++EK  G + VVD   +L GI +E D  R      +  +   + DVM
Sbjct: 18  VSSDQTVLDGLKVMAEKNIGALLVVD-NGELTGIFSERDYARKVILKDRHSDDTRIADVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   I  D  L   M ++   +I  L VVD   + IGI+   D++  
Sbjct: 77  TANVITIGPDQSLEEGMVIMSDRHIRHLPVVDK-GELIGIISINDIVTA 124



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 32/84 (38%), Gaps = 3/84 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+                        ++  +     L + + I+S++    + VVD
Sbjct: 51  FSERDYA--RKVILKDRHSDDTRIADVMTANVITIGPDQSLEEGMVIMSDRHIRHLPVVD 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
           +  +L GII+  DI     +D  T
Sbjct: 109 K-GELIGIISINDIVTAIIRDQKT 131


>gi|206891071|ref|YP_002248056.1| inosine-5'-monophosphate dehydrogenase [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206743009|gb|ACI22066.1| inosine-5'-monophosphate dehydrogenase [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 486

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H         +    V  S   + +
Sbjct: 42  NIPIVSAAMDTVTDANLAIAIAREGGIG-----VIHRNMLPEKQALEVDKVKKSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    PL +A+ ++   R   V V     KL GIIT  D+   F +D  T  VE+V
Sbjct: 97  DPITISPDAPLSEALALMERYRISGVPVTV-NGKLVGIITNRDLK--FERDF-TRKVEEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K           L  A ++L ++ I  L +VD+     G++   D+
Sbjct: 153 MTKERLITAHVGITLEEAQEILHRYKIEKLPIVDEDFNLKGLITIKDI 200


>gi|146303024|ref|YP_001190340.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701274|gb|ABP94416.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 128

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V+ G  L     I++EK  G V +  E  K  GI+TE D+ R   KD      V+D+M  
Sbjct: 16  VEKGATLRQITKIMTEKNVGSVIIT-ENGKPIGIVTERDVVRAIGKDHKLDDKVDDIMTV 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   + ED+ +T A+ L+R +NI  L V+ +  K  GI+   D+ + 
Sbjct: 75  SLITVREDSPITGALSLMRTYNIRHLPVISEDGKLTGIISIRDVAKA 121



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      + +   L    +++ + N+  +++  +  K IGIV   D++R 
Sbjct: 5   VKDYMKTEVISVEKGATLRQITKIMTEKNVGSVIIT-ENGKPIGIVTERDVVRA 57



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V+   P+  A++++       + V+ E  KL GII+  D+ +       +
Sbjct: 79  VREDSPITGALSLMRTYNIRHLPVISEDGKLTGIISIRDVAKALDDMFES 128


>gi|209966480|ref|YP_002299395.1| nucleotidyltransferase [Rhodospirillum centenum SW]
 gi|209959946|gb|ACJ00583.1| nucleotidyltransferase [Rhodospirillum centenum SW]
          Length = 641

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 55/132 (41%), Gaps = 9/132 (6%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P G LG                 +V     + +A   + +    C+ VV    +L GI+T
Sbjct: 168 PAGLLGRRLADLIR-----REPVVVAPEASIAEAARRMRQADISCLPVVAAD-RLVGIVT 221

Query: 269 EGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           + D+  R     L+ +L V  VM   P  + +  LL  A  LL +H I  L V+    + 
Sbjct: 222 DRDLRNRVLAAGLDPSLPVSAVMTPEPTRVEDTALLFEAQILLARHRIHHLPVL-RGGRL 280

Query: 327 IGIVHFLDLLRF 338
           +G+V   DLLR 
Sbjct: 281 VGVVTGTDLLRA 292



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    L +A  +L+  R   + V+  G +L G++T  D+ R   +    L  
Sbjct: 244 MTPEPTRVEDTALLFEAQILLARHRIHHLPVL-RGGRLVGVVTGTDLLRAQGRSFAFL-A 301

Query: 286 EDVMIK 291
            DV  +
Sbjct: 302 TDVGTR 307


>gi|193214909|ref|YP_001996108.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
           ATCC 35110]
 gi|193088386|gb|ACF13661.1| inosine-5'-monophosphate dehydrogenase [Chloroherpeton thalassium
           ATCC 35110]
          Length = 495

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 18/177 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL  +         V+H    +         V  S      
Sbjct: 41  NVPLISAAMDTVTESELAIALARAGGIG-----VIHKNLTIEKQAAEVDRVKRSESGMIK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE-----GQKLKGIITEGDIFRNFHKDLNTL 283
           +   +     + DA+ +++      + VVD+      +KLKGIIT  D+   F  D N L
Sbjct: 96  NPITLPENAIVKDALDLMARFSISGIPVVDDKSVPGQKKLKGIITNRDLR--FKPDENQL 153

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V ++M K +       T L  A ++L+ H I  L++VDD     G++ F D+L+  
Sbjct: 154 -VSNIMTKTDLITAAVGTDLDKAEEILQHHKIEKLLIVDDEGFLKGLITFKDILKKK 209


>gi|118431018|ref|NP_147193.2| hypothetical protein APE_0383.1 [Aeropyrum pernix K1]
 gi|116062345|dbj|BAA79338.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 158

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNP 293
             + +A  I+ E R G + VV+E   L GI+T+ DI R       D  ++ V D+M +NP
Sbjct: 27  TSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDIIREVVAKGLDPESVRVGDIMTRNP 86

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLRF 338
             +  D  +  A  L+ +HNI  L V+D + +K +GIV   D+++ 
Sbjct: 87  YYVYTDDSVERAASLMGEHNIGHLPVLDPETEKPVGIVTKTDIVKL 132



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 32/63 (50%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  + + V D+M   P   L  T +  A +++ ++ +  L+VV++    +GI+   D+
Sbjct: 3   LEEGYDDVLVRDIMSSPPITTLPMTSVKEAAKIMLENRVGSLIVVNERNTLLGILTKTDI 62

Query: 336 LRF 338
           +R 
Sbjct: 63  IRE 65


>gi|46581178|ref|YP_011986.1| CBS/ACT domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46450599|gb|AAS97246.1| CBS domain protein/ACT domain protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|311234852|gb|ADP87706.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
           RCH1]
          Length = 227

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 56/124 (45%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V     ++ A  ++ E  F  + V+D   KL GI+++ DI             
Sbjct: 7   MTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEASPSKATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + V+D+M ++P  +  D  +     L+ + +I  + VVD+  + +GI+   
Sbjct: 67  HELYYLLSEIKVKDIMTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITDS 126

Query: 334 DLLR 337
           D+ +
Sbjct: 127 DIFK 130



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + M +N   +  DT +  A +L++++    L V+D   K IGIV   D+   
Sbjct: 3   IREWMTRNVITVTPDTSMMKASKLMKENGFRRLPVLDGNGKLIGIVSDRDIKEA 56



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V+    +     ++ EK  G + VVDE  +L GIIT+ DIF+  
Sbjct: 82  MTRDPICVQPDETVERVALLMIEKHIGGMPVVDEEGQLVGIITDSDIFKVL 132


>gi|322367947|ref|ZP_08042516.1| peptidase M50 [Haladaptatus paucihalophilus DX253]
 gi|320551963|gb|EFW93608.1| peptidase M50 [Haladaptatus paucihalophilus DX253]
          Length = 388

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 1/123 (0%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             V   DVM   + +  V     + D +  +  +R     V+D+  +L G+IT  D    
Sbjct: 246 RNVRVRDVMTGAEDLHTVSSDMSIADLLETMFRQRHTGYPVIDD-GELVGMITLDDARSV 304

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +  +V +VM  + K I  D+    A++ ++QHNI  L V+D      GI+   DL
Sbjct: 305 RQVERDAYTVREVMSTDVKTIPADSDAMDALETIQQHNIGRLPVIDADGNVTGIISRTDL 364

Query: 336 LRF 338
           +  
Sbjct: 365 MTA 367



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               ++        +VM +      +      +DA+  + +   G + V+D    + GII
Sbjct: 302 RSVRQVERDAYTVREVMSTDVKT--IPADSDAMDALETIQQHNIGRLPVIDADGNVTGII 359

Query: 268 TEGDIFRNFH 277
           +  D+   F+
Sbjct: 360 SRTDLMTAFN 369


>gi|300861615|ref|ZP_07107699.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis TUSoD
           Ef11]
 gi|295112310|emb|CBL30947.1| inosine-5'-monophosphate dehydrogenase [Enterococcus sp. 7L76]
 gi|300849076|gb|EFK76829.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis TUSoD
           Ef11]
 gi|315143577|gb|EFT87593.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX2141]
          Length = 493

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNIKLNIPLMSASMDTVTDSNMAIAMARQGGLG-----VVHKNMTVAQQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          ++DA  ++S  R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPTNLVVDAEELMSRYRISGVPIVETMENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    + +E+VM K +       T L  A ++L++H I  L +VD+  +  G++  
Sbjct: 147 FVTD---YQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 159 MTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDIEKVIE 211


>gi|297380032|gb|ADI34919.1| inosine-5'-monophosphate dehydrogenase [Helicobacter pylori v225d]
          Length = 481

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDRGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTARVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 28/64 (43%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +   ++G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTARVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|311028942|ref|ZP_07707032.1| inosine 5'-monophosphate dehydrogenase [Bacillus sp. m3-13]
          Length = 487

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLKVKLTETLQLNIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  VDKVKRSERGVITDPFFLTPEHQVFDAEHLMGKYRISGVPIVNNNEELKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L+++ I  L +VD+     G++  
Sbjct: 145 --FIQDF-SIPISDVMTKENLVTASVGTTLEEAESILQKYKIEKLPLVDEAGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|317037370|ref|XP_001399033.2| CBS and PB1 domain protein [Aspergillus niger CBS 513.88]
          Length = 662

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 21/195 (10%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH---------- 208
            +  P+   S       T S+ +  +   A +    + +N S+ D  +            
Sbjct: 27  HIPRPRPETSSTTHTPQTASSDIGSSTMSAASSR--QRQNQSKRDEAIRRKLEADLNKKR 84

Query: 209 --PGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
             P     +       V+    S  L +K    + +A  +++ KR  CV V D+  ++ G
Sbjct: 85  HAPARANRSRKAPPGTVLALKPSQALQIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAG 144

Query: 266 IITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I T  D+  R     L    ++V ++M KNP     DT  T A+ L+ +     L V+D+
Sbjct: 145 IFTAKDLAFRVVGTGLKAREITVSEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDE 204

Query: 323 CQKAIGIVHFLDLLR 337
            Q   G++   D+ +
Sbjct: 205 NQDISGVL---DITK 216



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T S
Sbjct: 277 MPPTTVSVRTTVKDAAALMREHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCS 335

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 336 VVRVMTPHPDFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMV---DVLKL 386


>gi|209524128|ref|ZP_03272679.1| Polynucleotide adenylyltransferase region [Arthrospira maxima
           CS-328]
 gi|209495503|gb|EDZ95807.1| Polynucleotide adenylyltransferase region [Arthrospira maxima
           CS-328]
          Length = 925

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++V+D+  +L GII+  DI    H   N   V
Sbjct: 322 MSSPVRTIRPETSVGEAHRILLRYGHSGLSVLDDNHQLVGIISRRDIDIALHHGFNHSPV 381

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M    + I  DT L     ++  ++I  L V+++    +GIV   D+LR 
Sbjct: 382 KGYMTPQLRTITPDTSLPEIESIMVTYDIGRLPVLENGN-LVGIVTRTDVLRL 433



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 7/80 (8%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VD    L+ ++T      NF   +  + +  ++M    + I  +T +  A ++L ++  S
Sbjct: 295 VDPQSTLETLVT------NFKAQIPPSPTARELMSSPVRTIRPETSVGEAHRILLRYGHS 348

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L V+DD  + +GI+   D+
Sbjct: 349 GLSVLDDNHQLVGIISRRDI 368



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  +    +    +  +     L +  +I+     G + V+ E   L GI+T  D
Sbjct: 371 ALHHGFNHSPVKGYMTPQLRTITPDTSLPEIESIMVTYDIGRLPVL-ENGNLVGIVTRTD 429

Query: 272 IFRNF 276
           + R  
Sbjct: 430 VLRLL 434


>gi|167043446|gb|ABZ08148.1| putative CBS domain protein [uncultured marine microorganism
           HF4000_APKG1C9]
          Length = 147

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 2/116 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                   K    L DA  ++ +   G + VVD+   L G+IT+ D+  R   + ++   
Sbjct: 7   MTSDPACCKENQSLQDAARLMIDNDCGQIPVVDDEGGLVGVITDRDVCCRAVAEGMSAET 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V DVM ++   +  DT L   +  + ++ +  + V+DD  K  G+V   D+ R G
Sbjct: 67  RVGDVMTRSVVSVTPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVARTG 122



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 24/49 (48%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            ++M  +P    E+  L  A +L+  ++   + VVDD    +G++   D
Sbjct: 4   SEIMTSDPACCKENQSLQDAARLMIDNDCGQIPVVDDEGGLVGVITDRD 52



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V     L D +  + + +   V V+D+  K  G++++ D+ R  +       V++V
Sbjct: 79  VTPDTSLEDCLASMEKNQVRRVPVIDDDGKCCGMVSQADVARTGNDAKTAELVQEV 134


>gi|317009160|gb|ADU79740.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori India7]
          Length = 481

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHRTLADAKVITDNYKISGVPVVDDRGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|327399085|ref|YP_004339954.1| inosine-5'-monophosphate dehydrogenase [Hippea maritima DSM 10411]
 gi|327181714|gb|AEA33895.1| inosine-5'-monophosphate dehydrogenase [Hippea maritima DSM 10411]
          Length = 484

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 69/185 (37%), Gaps = 13/185 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +            P  SA M       +AIA+            ++H    +      
Sbjct: 28  VDVSASLTERLILKTPIISAAMDTVTEYRMAIAMARHGGLG-----IIHKNMPIEEQVKQ 82

Query: 220 ASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   + +    ++    + +A++++ +     + V  E   L GIIT  D+   
Sbjct: 83  IRRVKKSESGMIIDPITIRPEASINEALSLMKQFHISGIPVTLEDGTLVGIITNRDV--Q 140

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F KD  T  V+DVM K N     E   L  A + L+Q  +  L +VD   K  G++   D
Sbjct: 141 FEKD-YTKPVKDVMTKDNLITAKEGITLHEAEEYLKQFKVEKLPIVDKNFKIKGLITIKD 199

Query: 335 LLRFG 339
           + +  
Sbjct: 200 IRKKK 204


>gi|323136145|ref|ZP_08071227.1| inosine-5'-monophosphate dehydrogenase [Methylocystis sp. ATCC
           49242]
 gi|322398219|gb|EFY00739.1| inosine-5'-monophosphate dehydrogenase [Methylocystis sp. ATCC
           49242]
          Length = 495

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 71/191 (37%), Gaps = 9/191 (4%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           +      + +            P  SA M       LAIA+ ++         +  P  +
Sbjct: 24  SRVMPSGVDISTRLTRDITLNLPIISAAMDTVTEARLAIAMAQAGGIGVIHQNLS-PAAQ 82

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGII 267
              +                +     L DA+ +++      + VV+ G      KL GI+
Sbjct: 83  AAEVRKVKRYESGMVVDPITIFPDETLADALALMAGHGISGIPVVERGPNSAKGKLVGIL 142

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  D+   F +D + L + ++M K    + E      A +LL +H I  L+VVD+    +
Sbjct: 143 TNRDVR--FAQDKSQL-IAELMTKKLVTVREGVGQAEAQRLLHEHRIEKLLVVDEDFHCV 199

Query: 328 GIVHFLDLLRF 338
           G+V   D+ + 
Sbjct: 200 GLVTVKDIEKA 210


>gi|304405772|ref|ZP_07387430.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
           curdlanolyticus YK9]
 gi|304345015|gb|EFM10851.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus
           curdlanolyticus YK9]
          Length = 485

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEAAMAIAIAREGGLG-----IIHKNMSIAQQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VD+  KL GI+T  D+   F  D  ++ + +V
Sbjct: 98  NPFSLTPEHHVYDAEALMGKYRISGVPIVDDAGKLVGILTNRDLR--FVHD-YSMKINEV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +   V     T L  A  +L++H I  L +VD+     G++   D+ + 
Sbjct: 155 MTREELVTAPVGTTLEQAEGILQKHKIEKLPLVDENNTLKGLITIKDIEKA 205


>gi|260585064|ref|ZP_05852806.1| inosine-5'-monophosphate dehydrogenase [Granulicatella elegans ATCC
           700633]
 gi|260157260|gb|EEW92334.1| inosine-5'-monophosphate dehydrogenase [Granulicatella elegans ATCC
           700633]
          Length = 492

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLQVQLAKNLLLKIPLMSASMDTVTDSTMAIAIARQGGLG-----VIHKNMSIEAQAEE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + L          + +A  ++++ R   V +V+  E +KL GI+T  D+ 
Sbjct: 87  VHKVKRSESGVILNPFFLTPKHSVQEAEELMAKYRISGVPIVESFENKKLVGILTNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ +E+VM K P +     T L  A  +L++H I  L +VD+     G++  
Sbjct: 147 FITD---YSIEIEEVMTKEPLITAPVGTSLKEAESILQRHKIEKLPLVDEKGNLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|212697476|ref|ZP_03305604.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM
           7454]
 gi|212675475|gb|EEB35082.1| hypothetical protein ANHYDRO_02046 [Anaerococcus hydrogenalis DSM
           7454]
          Length = 483

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSASMDTVTESKMAIAMARQGGIG-----IIHKNMSIEEQAKEVDRVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A+ I++  R   V +VD+   LKGI+T  D+     ++   + ++D+
Sbjct: 95  DPFYLEADNILKEALEIMANYRISGVPIVDDQMTLKGILTNRDVRF---QNDENVKIDDI 151

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+  ++      +  A++ +    +  L +VDD  K  G++   D+
Sbjct: 152 MTKDGLIVGHVGISMEDAVKKMESGKVEKLPIVDDDYKLKGLITIKDI 199


>gi|329577274|gb|EGG58737.1| inosine-5'-monophosphate dehydrogenase [Enterococcus faecalis
           TX1467]
          Length = 461

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 69/182 (37%), Gaps = 15/182 (8%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +  +         P  SA M       +AIA+            V+H    +       
Sbjct: 1   DMGVQLAKNIKLNIPLMSASMDTVTDSNMAIAMARQGGLG-----VVHKNMTVAQQADEV 55

Query: 221 SDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFR 274
             V  S   + +          + DA  ++S  R   V +V+  E +KL GIIT  D+  
Sbjct: 56  RKVKRSESGVIIDPFFLTPTNLVADAEELMSRYRISGVPIVETMENRKLVGIITNRDMRF 115

Query: 275 NFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                   + +E+VM K +       T L  A ++L++H I  L +VD+  +  G++   
Sbjct: 116 VTD---YQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIK 172

Query: 334 DL 335
           D+
Sbjct: 173 DI 174



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 127 MTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDIEKVIE 179


>gi|258576507|ref|XP_002542435.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
 gi|237902701|gb|EEP77102.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
          Length = 656

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     +    +++ ++
Sbjct: 98  QIKPSTTVAEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGIRARDITIAEI 157

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 158 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 203



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 265 PPITVSVRTSVKEAAALMKEHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 323

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 324 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 373


>gi|257061543|ref|YP_003139431.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8802]
 gi|256591709|gb|ACV02596.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 8802]
          Length = 903

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       ++VVDE   L GII+  D+    H   +   V
Sbjct: 325 MSSPVRTIRPETTIEQAQRVLFRYGHSGLSVVDENDILVGIISRRDLDLALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M ++ K+I  +TLL     ++  ++I  L VV +  K +GIV   DLLR
Sbjct: 385 KGYMTRHLKIITPETLLPEIESIMVTYDIGRLPVV-EGDKLLGIVTRTDLLR 435



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + I  +T +  A ++L ++  S L VVD+    +GI+   DL
Sbjct: 319 LTARDLMSSPVRTIRPETTIEQAQRVLFRYGHSGLSVVDENDILVGIISRRDL 371



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    + ++     L +  +I+     G + VV EG KL GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMTRHLKIITPETLLPEIESIMVTYDIGRLPVV-EGDKLLGIVTRTD 432

Query: 272 IFRNFHKD 279
           + R  H++
Sbjct: 433 LLRQIHQN 440


>gi|134045264|ref|YP_001096750.1| hypothetical protein MmarC5_0219 [Methanococcus maripaludis C5]
 gi|132662889|gb|ABO34535.1| protein of unknown function DUF39 [Methanococcus maripaludis C5]
          Length = 513

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 2/111 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +  +   + +A  +L E     + ++DE  KL GIIT  DI +   +D +  S+ +
Sbjct: 396 KPAVVGSLNTSITEASRVLIENNINHLPIIDENGKLSGIITSWDIAKAMAQDKH--SISE 453

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M         D  + +A + + ++NIS L VVD   + +G+V   D+ + 
Sbjct: 454 IMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNRVLGVVSAEDISKL 504



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K   V   +T +T A ++L ++NI+ L ++D+  K  GI+   D+ + 
Sbjct: 390 VKDILSKPAVVGSLNTSITEASRVLIENNINHLPIIDENGKLSGIITSWDIAKA 443



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/69 (13%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            +          +    +  +V       +  A   +S      + VVD   ++ G+++ 
Sbjct: 439 DIAKAMAQDKHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNRVLGVVSA 498

Query: 270 GDIFRNFHK 278
            DI +   +
Sbjct: 499 EDISKLIGR 507


>gi|119187931|ref|XP_001244572.1| hypothetical protein CIMG_04013 [Coccidioides immitis RS]
          Length = 655

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 100 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEI 159

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 160 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 205



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 267 PPITVSVRTSVKDAAALMREHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 325

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 326 VRVMTPHPDFAPTDMSIQAALRKMHYGHYLNLPVMNESGEIVGMV---DVLKL 375


>gi|218439348|ref|YP_002377677.1| polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7424]
 gi|218172076|gb|ACK70809.1| Polynucleotide adenylyltransferase region [Cyanothece sp. PCC 7424]
          Length = 903

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 1/141 (0%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R               +  +    S        +  ++    +  A  IL       ++V
Sbjct: 297 RGIDPQQMLTQLVEQLIELIPQPLSARDLMSSPVRTIRPETTIEQAQRILLRYGHSGLSV 356

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           VDE  +L GII+  DI    H   +   V+  M +NPK I  +T L    +L+  +++  
Sbjct: 357 VDEKDQLVGIISRRDIDLALHHGFSHAPVKGYMTRNPKTITPETSLPEIEELMVTYDLGR 416

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV   ++ +GIV   D+LR
Sbjct: 417 LPVV-KNEQLLGIVTRTDVLR 436



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   +   +     L +   ++     G + VV + ++L GI+T  D
Sbjct: 375 ALHHGFSHAPVKGYMTRNPKTITPETSLPEIEELMVTYDLGRLPVV-KNEQLLGIVTRTD 433

Query: 272 IFRNFHKDLNTLS 284
           + R  H+D     
Sbjct: 434 VLRQIHQDRLEKK 446


>gi|83589956|ref|YP_429965.1| inosine-5'-monophosphate dehydrogenase [Moorella thermoacetica ATCC
           39073]
 gi|83572870|gb|ABC19422.1| inosine-5'-monophosphate dehydrogenase [Moorella thermoacetica ATCC
           39073]
          Length = 485

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI++            V+H    +         V  S   +  
Sbjct: 43  NTPLVSAAMDTVTEARTAISMAREGGIG-----VIHKNMTIERQAREVDRVKRSEHGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +AI ++       V + D   KL GIIT  DI     +D +   +++V
Sbjct: 98  DPISLSPDHKVREAIALMEHYHISGVPITD-NGKLVGIITNRDIRF---EDNHERPIKEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  AM +LR H I  L +VD      G++   D+
Sbjct: 154 MTKDNLVTAPVGTTLAEAMAILRAHKIEKLPLVDADYNLKGLITIKDI 201


>gi|25027164|ref|NP_737218.1| inositol-5-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|23492445|dbj|BAC17418.1| IMP dehydrogenase [Corynebacterium efficiens YS-314]
          Length = 513

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +DIV   +    +         P  SA M       +AIA+
Sbjct: 22  NKVALVGLTFDDVLLLPDASDIVPSDVDTSTQVTRNIRLSTPIISAAMDTVTEARMAIAM 81

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       VLH    +         V  S                + +   + +  
Sbjct: 82  ARQGGLG-----VLHRNLSIEEQAENVELVKRSESGMVTDPVTCTPDMTIEEVDNLCARF 136

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQL 308
           R   + VVD+   L GI T  D+   F  D N L V DVM   P ++ E+ +    A+QL
Sbjct: 137 RISGLPVVDKDGTLLGICTNRDMR--FESDPNRL-VTDVMTPMPLIVAEEGVAKEDALQL 193

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +VD   K +G++   D ++
Sbjct: 194 LSTHKVEKLPIVDKNNKLVGLITVKDFVK 222


>gi|294633516|ref|ZP_06712075.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831297|gb|EFF89647.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 227

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G P  +   +L E     V VVD+  +  G+++E D+ R         +  D+M   
Sbjct: 8   VRPGTPFKEIARVLDEYDITAVVVVDDQDRPVGVVSEADLLRRQTSGGRGSTARDLMTSP 67

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V         A + + +H++  L VVD   + IG+V   DL+R 
Sbjct: 68  AVVAEPGWHAVRAARTMERHHVKRLPVVDGEGRLIGVVSRSDLVRL 113



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M      +   T      ++L +++I+ ++VVDD  + +G+V   DLLR
Sbjct: 1   MTPTAVSVRPGTPFKEIARVLDEYDITAVVVVDDQDRPVGVVSEADLLR 49


>gi|27262442|gb|AAN87502.1| Inosine-5'-monophosphate dehydrogenase [Heliobacillus mobilis]
          Length = 500

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 60/171 (35%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 58  NIPLMSAGMDTVTDSRMAIAMAREGGIG-----VIHKNMTIDQQAHEVDRVKRSEHGVIT 112

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+       V + DE  KL GI+T  D+         +  + DV
Sbjct: 113 DPIYLTPKHKINDALAIMERYHISGVPIADEEGKLVGILTNRDLRFETE---FSRPISDV 169

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+  V     T L  A  +LR H +  L +VD      G++   D+ + 
Sbjct: 170 MTKDNLVTAPIGTSLKEAKDILRNHKVEKLPIVDVEGHLKGLITIKDIQKA 220


>gi|58261286|ref|XP_568053.1| hypothetical protein [Cryptococcus neoformans var. neoformans
           JEC21]
 gi|57230135|gb|AAW46536.1| conserved hypothetical protein [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 704

 Score = 98.0 bits (243), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/127 (30%), Positives = 55/127 (43%), Gaps = 4/127 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           GGK  +       V     S  L V  G  + DA  + + KR  CV VVDE + L GI T
Sbjct: 70  GGKRSSKRPQKGTVAGLRPSPALTVPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFT 129

Query: 269 EGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
             D+         D  + SV  +M KNP V  + T  T A+QL+       L V ++   
Sbjct: 130 AKDLAFRVTAEGLDPRSTSVAQIMTKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGD 189

Query: 326 AIGIVHF 332
            +G++  
Sbjct: 190 VVGLLDI 196



 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---------------KLKGI 266
            V+ +  + P V     + +A  ++ E+R   V V++                  K+ GI
Sbjct: 259 TVIDTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVVPKIAGI 318

Query: 267 ITEGDI-FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            T  DI  R     L+    SV  VM  +P       ++  A++ +   +   L VV+  
Sbjct: 319 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEAD 378

Query: 324 QKAIGIVHFLDLLRF 338
            + IGIV   D+L+ 
Sbjct: 379 GRLIGIV---DVLKL 390



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D  +      L         VM              + DA+  +    +  + VV+
Sbjct: 319 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTA--PPTMVVQDALKKMHNGHYLNLPVVE 376

Query: 259 EGQKLKGII 267
              +L GI+
Sbjct: 377 ADGRLIGIV 385


>gi|320038151|gb|EFW20087.1| CBS and PB1 domain-containing protein [Coccidioides posadasii str.
           Silveira]
          Length = 655

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 100 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEI 159

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 160 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 205



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 267 PPITVSVRTSVKDAAALMREHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 325

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 326 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 375


>gi|251794125|ref|YP_003008856.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. JDR-2]
 gi|247541751|gb|ACS98769.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus sp. JDR-2]
          Length = 485

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALAIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTESALAIAIAREGGVG-----IIHKNMSVAQQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VD  QKL GI+T  D+   F  D  ++ + +V
Sbjct: 98  NPFSLTPDHHVYDAEELMGKYRISGVPIVDSEQKLVGILTNRDLR--FVHD-YSIKINEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + +       T L  A  LL++H I  L +VD+     G++   D+ + 
Sbjct: 155 MTRTDLVTAPVGTTLQEAEGLLQKHKIEKLPLVDENNTLKGLITIKDIEKA 205


>gi|332800116|ref|YP_004461615.1| inosine-5'-monophosphate dehydrogenase [Tepidanaerobacter sp. Re1]
 gi|332697851|gb|AEE92308.1| inosine-5'-monophosphate dehydrogenase [Tepidanaerobacter sp. Re1]
          Length = 482

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 71/171 (41%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +    +    V  S   + +
Sbjct: 41  NIPIISAGMDTVTEARLAIAIAREGGIG-----IIHKNMPIEMQALEVDKVKRSEHGVIV 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++   +   V +  EG+KL GI+T  D+     +D  T  ++DV
Sbjct: 96  DPFYLSPENLIGDALELMERYKISGVPIT-EGKKLVGILTNRDLRF---EDDTTKKIKDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N     E T L  AM++L++H I  L +VD+     G++   D+ + 
Sbjct: 152 MTKENLVTAPEGTDLDGAMKILKKHKIEKLPIVDEDFNLKGLITIKDIEKA 202


>gi|89100965|ref|ZP_01173811.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. NRRL B-14911]
 gi|89084336|gb|EAR63491.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. NRRL B-14911]
          Length = 488

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 15/181 (8%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           L  +         P  SA M       +AIA+  +         ++H    +        
Sbjct: 32  LHVDLTDKVRLNIPIISAGMDTVTEAEMAIAMARAGGLG-----IIHKNMSIEQQADQVD 86

Query: 222 DVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRN 275
            V  S   +            + DA  ++ + R   V +V+    QKL GIIT  D+   
Sbjct: 87  KVKRSESGVITDPFFLTPDQQVFDAEHLMGKYRISGVPIVNNNDEQKLVGIITNRDLR-- 144

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D  ++ + DVM K N       T L  A  +L+++ I  L +VD      G++   D
Sbjct: 145 FIQD-YSIKISDVMTKENLVTAPVGTTLEEAESILQKYKIEKLPLVDQEGVLKGLITIKD 203

Query: 335 L 335
           +
Sbjct: 204 I 204


>gi|314935046|ref|ZP_07842405.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus caprae C87]
 gi|313652976|gb|EFS16739.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus caprae C87]
          Length = 488

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD      L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPDESVYEAEALMGKYRISGVPIVDNDSDGNLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K   +     T L  A  +L++H I  L +V +  K  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEGLITAPVGTTLDEAEAVLQEHKIEKLPLV-ENGKLKGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|289192335|ref|YP_003458276.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938785|gb|ADC69540.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 298

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 56/111 (50%), Gaps = 3/111 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +  +     L +   + +EK      VVD    L GII+  DI +N        SV+D
Sbjct: 178 KEVYTINPNSTLKETAKLFAEKYISGAPVVD-NGSLVGIISLHDIAKNIEN--INKSVKD 234

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM K+   I +D  +  A++++ ++N+  L++VDD  K +GI+   D+L+ 
Sbjct: 235 VMRKDVLTIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDILKI 285



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 35/84 (41%), Gaps = 10/84 (11%)

Query: 260 GQKLKGIITEGDIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             K+ G   + DI R    D      +  + V DV IK    I  ++ L    +L  +  
Sbjct: 144 NGKVIG--RD-DIHRILLIDVLGVSSIPNVKVGDVGIKEVYTINPNSTLKETAKLFAEKY 200

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           IS   VVD+    +GI+   D+ +
Sbjct: 201 ISGAPVVDN-GSLVGIISLHDIAK 223



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +  +     DVM        +     + DA+ I+++   G + +VD+  K+ GIIT 
Sbjct: 222 AKNIENINKSVKDVMRKDVLT--IHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITR 279

Query: 270 GDIFRNF 276
            DI +  
Sbjct: 280 TDILKII 286


>gi|303316684|ref|XP_003068344.1| CBS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
 gi|240108025|gb|EER26199.1| CBS domain containing protein [Coccidioides posadasii C735 delta
           SOWgp]
          Length = 655

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 100 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEI 159

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 160 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 205



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 267 PPITVSVRTSVKDAAALMREHHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 325

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 326 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 375


>gi|261601605|gb|ACX91208.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 132

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +    +  V     L +   I+++   G V VVD   K  GIITE D+ R   K  +   
Sbjct: 12  YMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVD-NGKPIGIITERDVVRAIGKGKSLDT 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             E++M  +   I ED+ +T A+ L+R +NI  L V+D      GI+   D+ R 
Sbjct: 71  IAEEIMTASLITIKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARA 125



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      +  +T+L    +++  +N+  ++VVD+  K IGI+   D++R 
Sbjct: 9   VKEYMKTRVITVGRNTMLKEVTRIMTDNNVGSVIVVDN-GKPIGIITERDVVRA 61



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +K   P+  A++++       + V+D    L+GII+  DI R   
Sbjct: 83  IKEDSPITGALSLMRTYNIRHLPVIDYDGNLRGIISIRDIARAID 127


>gi|149179595|ref|ZP_01858119.1| CBS [Planctomyces maris DSM 8797]
 gi|148841566|gb|EDL56005.1| CBS [Planctomyces maris DSM 8797]
          Length = 147

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +         + +A +++ +   G + VVD+   L G++T+ DI  R   K  +   
Sbjct: 7   MTSNPACCSPSSTVQEAASLMVDNDCGEIPVVDDSGALVGVVTDRDIACRCVAKGKSSDQ 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE+VM  +P  +  D  +      +  + +  L VVDD  K  GIV   D+ R
Sbjct: 67  RVEEVMTSSPVTVTADASVDECCTKMEDNQVRRLPVVDDKGKCCGIVAQADIAR 120



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  +DVM  NP      + +  A  L+  ++   + VVDD    +G+V   D+
Sbjct: 1   MKAQDVMTSNPACCSPSSTVQEAASLMVDNDCGEIPVVDDSGALVGVVTDRDI 53



 Score = 36.0 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K  +      +VM S      V     + +  T + + +   + VVD+  K  GI+ + D
Sbjct: 60  KGKSSDQRVEEVMTSSPVT--VTADASVDECCTKMEDNQVRRLPVVDDKGKCCGIVAQAD 117

Query: 272 IFRNFHKDLNTLSVEDV 288
           I R+  +      V +V
Sbjct: 118 IARSAAEKETGDLVREV 134


>gi|315100655|gb|EFT72631.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL046PA1]
          Length = 504

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQASMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPIREVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|134084625|emb|CAK97501.1| unnamed protein product [Aspergillus niger]
          Length = 609

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     L    ++V ++
Sbjct: 58  QIKPNTSIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGTGLKAREITVSEI 117

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++   D+ +
Sbjct: 118 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL---DITK 163



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T S
Sbjct: 224 MPPTTVSVRTTVKDAAALMREHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCS 282

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 283 VVRVMTPHPDFAPSDMSIQAALRKMHDGHYLNLPVMNDAGEIVGMV---DVLKL 333


>gi|240280165|gb|EER43669.1| CBS and PB1 protein [Ajellomyces capsulatus H143]
          Length = 612

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS----DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           E D      G    +     +     +         +K    + +A  +++ KR  CV V
Sbjct: 17  EADLNKKRHGNHARSRHSRKAPPGTVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLV 76

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            D+  ++ GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +  
Sbjct: 77  TDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKG 136

Query: 314 ISVLMVVDDCQKAIGIVHF 332
              L V+D+ Q   GI+  
Sbjct: 137 FRHLPVMDENQDISGILDI 155



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A T++ E     + V D    + GI T  D+  R      D NT SV
Sbjct: 219 PPTTVSVRTSVREAATLMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPNTCSV 277

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 278 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 327


>gi|226287801|gb|EEH43314.1| CBS and PB1 domain-containing protein [Paracoccidioides
           brasiliensis Pb18]
          Length = 661

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
                  +K    + +A  +++ KR  CV V DE +++ GI T  D+  R     +    
Sbjct: 76  KPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIRARD 135

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +++ ++M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 136 VTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 185



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 19/125 (15%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A  ++ E     + V D    + GI T  DI  R      D NT SV
Sbjct: 249 PPTTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPNTCSV 307

Query: 286 EDVMIKNPKVILEDTLLTVAMQLL---RQHNIS---------VLMVVDDCQKAIGIVHFL 333
             VM  +P     D  +  A++ +    +  ++          L V+++  + +G+V   
Sbjct: 308 VRVMTPHPDFAPTDMSIQAALRKMHGAEETGLTISKLDGHYLNLPVMNEAGEIVGMV--- 364

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 365 DVLKL 369



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 35/223 (15%), Positives = 70/223 (31%), Gaps = 47/223 (21%)

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSENDFYVLHPGGKLG 214
           + L      +  P+      + +M     D + +   + R    F+  D      G  + 
Sbjct: 73  MALKPSHALQIKPNTTVAEAAQLMAAKREDCVLVTDEDERIAGIFTAKDLAFRVVGAGIR 132

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--IT--EG 270
              V  +++M         +      DA+ ++  K F  + V+DE Q + GI  IT    
Sbjct: 133 ARDVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMDENQDISGILDITKCFY 190

Query: 271 DIFRNFHK---------------------DLNTLSVEDV------MI----------KNP 293
           D      +                     +     ++ V      M             P
Sbjct: 191 DAMEKLERAYSSSRKLYDALEGVQSELGSNQPQQIIQYVEALRQKMSGPTLETVLNGLPP 250

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   T +  A  L+++++ + L+V D      GI    D++
Sbjct: 251 TTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDIV 292


>gi|45358922|ref|NP_988479.1| hypothetical protein MMP1359 [Methanococcus maripaludis S2]
 gi|45047788|emb|CAF30915.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 513

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             + +  +   +  A  +L E     + +VDE  KL GIIT  DI +   +D +  S+ +
Sbjct: 396 RPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKAMAQDKH--SISE 453

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M         D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 454 IMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ +   V   +T +T A ++L ++NI+ L +VD+  K  GI+   D+ + 
Sbjct: 390 VKDILSRPVVVGSLNTSITQASRVLIENNINHLPIVDENGKLSGIITSWDIAKA 443



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/70 (14%), Positives = 24/70 (34%), Gaps = 2/70 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            +          +    +  +V       +  A   +S      + VVD   K+ G+++ 
Sbjct: 439 DIAKAMAQDKHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSA 498

Query: 270 GDIFRNFHKD 279
            DI +   ++
Sbjct: 499 EDISKLIGRN 508


>gi|313206960|ref|YP_004046137.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           DSM 15868]
 gi|312446276|gb|ADQ82631.1| inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           DSM 15868]
 gi|315024036|gb|EFT37038.1| Inosine-5'-monophosphate dehydrogenase [Riemerella anatipestifer
           RA-YM]
 gi|325335603|gb|ADZ11877.1| IMP dehydrogenase/GMP reductase [Riemerella anatipestifer RA-GD]
          Length = 486

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL             +H    +       + V  S + +  
Sbjct: 44  NVPIVSAAMDTVTESDLAIALARVGGLG-----FIHKNMPIEEQAAQVNKVKRSENGMIA 98

Query: 233 VKI----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       L +A  ++S  +   + VVD    L GIIT  D+    +++   + VE++
Sbjct: 99  DPVTLSKDYTLREAKELMSRYKISGLPVVDNNNTLIGIITNRDVK---YQENLDMKVEEL 155

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     ++T L  A  +L ++ +  L +VD+  K +G++   D+
Sbjct: 156 MTKDNLVTSDKNTTLETAKNILLENRVEKLPIVDENFKLVGLITIKDI 203


>gi|289451043|gb|ADC93959.1| KdsD [Leptospira interrogans serovar Autumnalis]
          Length = 139

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +VM   DS P++K    L +A+  + +   G   +VDE  KL G++T+GDI R
Sbjct: 6   NRNKLVREVMLKPDSFPVLKETIILKEALETMGKFNLGIACIVDEDSKLLGLVTDGDIRR 65

Query: 275 NF---HKDLNTLSVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                 K  + L V+D     IK+P  I  D  L   + L+   ++  L VVD   + IG
Sbjct: 66  KLLKVQKPFSALFVDDALEHCIKSPVCISADAKLIDGVNLMGAKHVWDLPVVDSNHRLIG 125

Query: 329 IVHFL 333
           ++H  
Sbjct: 126 LLHLH 130


>gi|304317533|ref|YP_003852678.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779035|gb|ADL69594.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 484

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +    +    V  S   +  
Sbjct: 42  NIPLISAGMDTVTESRLAIAIAREGGIG-----IIHKNMSIEKQALEVDRVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++   R   V +     KL GIIT  DI   F  +L    +++V
Sbjct: 97  NPFYLTPDHKIQDAVELMERYRISGVPITV-NNKLVGIITNRDIR--FESNL-ERPIKEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T +  A ++L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKENLVTAPVGTTMDEAREILKRHKIEKLPLVDEDNNLKGLITIKDIEKA 203


>gi|225560596|gb|EEH08877.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus
           G186AR]
 gi|325088886|gb|EGC42196.1| CBS and PB1 domain-containing protein [Ajellomyces capsulatus H88]
          Length = 668

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 7/139 (5%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS----DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           E D      G    +     +     +         +K    + +A  +++ KR  CV V
Sbjct: 73  EADLNKKRHGNPARSRHSRKAPPGTVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLV 132

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            D+  ++ GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +  
Sbjct: 133 TDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKG 192

Query: 314 ISVLMVVDDCQKAIGIVHF 332
              L V+D+ Q   GI+  
Sbjct: 193 FRHLPVMDENQDISGILDI 211



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A T++ E     + V D    + GI T  D+  R      D NT SV
Sbjct: 275 PPTTVSVRTSVREAATLMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPNTCSV 333

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 334 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 383


>gi|168182079|ref|ZP_02616743.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Bf]
 gi|237796736|ref|YP_002864288.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum Ba4
           str. 657]
 gi|182674795|gb|EDT86756.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Bf]
 gi|229260658|gb|ACQ51691.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum Ba4
           str. 657]
          Length = 484

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  + +KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPIT-KEEKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|320590954|gb|EFX03395.1| cbs and pb1 domain containing protein [Grosmannia clavigera kw1407]
          Length = 692

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+           N++++ ++
Sbjct: 114 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGTKANSVTIAEI 173

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 174 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 219



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+    SV
Sbjct: 281 PPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPANCSV 339

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 340 VRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 389



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/179 (17%), Positives = 58/179 (32%), Gaps = 44/179 (24%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G       V  +++M         +      DA+ ++  K F  + V+D
Sbjct: 149 FTAKDLAYRVVGAGTKANSVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 206

Query: 259 EGQKLKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV--------- 288
           E Q + GI  IT+                    D       +L T   + V         
Sbjct: 207 ENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQSELGTSQPQQVIQYVEALRS 266

Query: 289 -MI----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M             P  +   T +  A QL+++++ + ++V D      GI    D++
Sbjct: 267 KMSGPTLETVLNGLPPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVV 324


>gi|313887913|ref|ZP_07821592.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus harei
           ACS-146-V-Sch2b]
 gi|312846079|gb|EFR33461.1| inosine-5'-monophosphate dehydrogenase [Peptoniphilus harei
           ACS-146-V-Sch2b]
          Length = 481

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 65/181 (35%), Gaps = 13/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       ++IA+            ++H    +    + 
Sbjct: 27  VDLSTNLTEKIKLNIPLMSAGMDTVTEHKMSIAMAREGGIG-----IIHKNMSIEEQALE 81

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   +            + DA  ++   R   V VV E   L+GIIT  DI   
Sbjct: 82  VDKVKRSEHGVITDPFSLTKDHSIADASELMERYRISGVPVVTEKGVLEGIITNRDIR-- 139

Query: 276 FHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F  DL+   + DVM  +       D  L  A+ +L+++ I  L +VD      G++   D
Sbjct: 140 FETDLSK-RISDVMTSEKLITGDPDINLDQALNILKKYKIEKLPLVDKDNVLKGLITIKD 198

Query: 335 L 335
           +
Sbjct: 199 I 199


>gi|289191641|ref|YP_003457582.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus sp.
           FS406-22]
 gi|288938091|gb|ADC68846.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus sp.
           FS406-22]
          Length = 495

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 46/169 (27%), Positives = 68/169 (40%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIAL            V+H    +         V  + +    
Sbjct: 44  NIPIISAAMDTVTEKEMAIALARLGGLG-----VIHRNMSIEEQVHQVQAVKKADEVVIK 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  V     + DAI ++       + VVD   KL GIIT  D+     K   T  V+DV
Sbjct: 99  DVITVSPDDTIGDAINVMETYSISGLPVVDNEDKLVGIITHRDVKAVEDK---TKKVKDV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+     ED     A++L+  + +  L +VDD  K IGI+   D+L+
Sbjct: 156 MTKDVVCAKEDVEEEEALELMYANRVERLPIVDDENKLIGIITLRDILK 204


>gi|226327672|ref|ZP_03803190.1| hypothetical protein PROPEN_01545 [Proteus penneri ATCC 35198]
 gi|225204198|gb|EEG86552.1| hypothetical protein PROPEN_01545 [Proteus penneri ATCC 35198]
          Length = 273

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S V  A +    +   +      +       F   V+ I   + RV I GIG SG +  
Sbjct: 83  DSLVVIAQKLAQEKSNSICDTTRQIN---YLHFEKVVQLIDEAQ-RVQIIGIGGSGLVAR 138

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L+  L   G  +              M++  DL IV+S+SG   ++      A++    
Sbjct: 139 DLSYKLQKIGITTLIETDHHVQISVAQMLSPKDLQIVISYSGKRKDMLVAASVAKKQGAK 198

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +IAIT E  S +   +D +L    +        A  +S   Q  I D + +ALL+ R+
Sbjct: 199 IIAITGEKHSPLGQISDYILETIADEGEWR--SASISSRTAQNTITDLIFMALLKKRD 254


>gi|327332310|gb|EGE74046.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL097PA1]
          Length = 504

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPIREVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|259506701|ref|ZP_05749603.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
 gi|259165719|gb|EEW50273.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium efficiens
           YS-314]
          Length = 506

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 79/209 (37%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +DIV   +    +         P  SA M       +AIA+
Sbjct: 15  NKVALVGLTFDDVLLLPDASDIVPSDVDTSTQVTRNIRLSTPIISAAMDTVTEARMAIAM 74

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       VLH    +         V  S                + +   + +  
Sbjct: 75  ARQGGLG-----VLHRNLSIEEQAENVELVKRSESGMVTDPVTCTPDMTIEEVDNLCARF 129

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQL 308
           R   + VVD+   L GI T  D+   F  D N L V DVM   P ++ E+ +    A+QL
Sbjct: 130 RISGLPVVDKDGTLLGICTNRDMR--FESDPNRL-VTDVMTPMPLIVAEEGVAKEDALQL 186

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +VD   K +G++   D ++
Sbjct: 187 LSTHKVEKLPIVDKNNKLVGLITVKDFVK 215


>gi|289424987|ref|ZP_06426766.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           SK187]
 gi|289427694|ref|ZP_06429406.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           J165]
 gi|289154686|gb|EFD03372.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           SK187]
 gi|289159185|gb|EFD07377.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           J165]
 gi|313793354|gb|EFS41412.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL110PA1]
 gi|313801003|gb|EFS42271.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL110PA2]
 gi|313808743|gb|EFS47197.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL087PA2]
 gi|313812202|gb|EFS49916.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL025PA1]
 gi|313817923|gb|EFS55637.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL046PA2]
 gi|313819835|gb|EFS57549.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL036PA1]
 gi|313823326|gb|EFS61040.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL036PA2]
 gi|313824800|gb|EFS62514.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL063PA1]
 gi|313828304|gb|EFS66018.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL063PA2]
 gi|313838044|gb|EFS75758.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL086PA1]
 gi|314925829|gb|EFS89660.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL036PA3]
 gi|314960773|gb|EFT04874.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL002PA2]
 gi|314963447|gb|EFT07547.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL082PA1]
 gi|314969844|gb|EFT13942.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL037PA1]
 gi|314979816|gb|EFT23910.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL072PA2]
 gi|314986150|gb|EFT30242.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL005PA2]
 gi|314988763|gb|EFT32854.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL005PA3]
 gi|315077295|gb|EFT49357.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL053PA2]
 gi|315079976|gb|EFT51952.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL078PA1]
 gi|315083303|gb|EFT55279.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL027PA2]
 gi|315086924|gb|EFT58900.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL002PA3]
 gi|315090015|gb|EFT61991.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL072PA1]
 gi|315109282|gb|EFT81258.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL030PA2]
 gi|327325078|gb|EGE66884.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL096PA3]
 gi|327449277|gb|EGE95931.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL013PA2]
 gi|327451719|gb|EGE98373.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL092PA1]
 gi|328756378|gb|EGF69994.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL020PA1]
 gi|332676168|gb|AEE72984.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           266]
          Length = 504

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPIREVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|295131295|ref|YP_003581958.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           SK137]
 gi|291375777|gb|ADD99631.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           SK137]
 gi|313773179|gb|EFS39145.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL074PA1]
 gi|313810463|gb|EFS48177.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL083PA1]
 gi|313830158|gb|EFS67872.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL007PA1]
 gi|313833127|gb|EFS70841.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL056PA1]
 gi|314972993|gb|EFT17089.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL053PA1]
 gi|314975607|gb|EFT19702.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL045PA1]
 gi|314984799|gb|EFT28891.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL005PA1]
 gi|315096663|gb|EFT68639.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL038PA1]
 gi|327325295|gb|EGE67100.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL096PA2]
 gi|327444098|gb|EGE90752.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL043PA1]
 gi|327447528|gb|EGE94182.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL043PA2]
 gi|328761288|gb|EGF74815.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL099PA1]
          Length = 504

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPIREVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|70605897|ref|YP_254767.1| hypothetical protein Saci_0044 [Sulfolobus acidocaldarius DSM 639]
 gi|68566545|gb|AAY79474.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 164

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 50/111 (45%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             ++ +++    +  A   + +   G + V+D   K+ GIITE D+ R   +     +V 
Sbjct: 10  NKTVHVIREDDSVRFAAEEMKKHNIGSLIVIDNRGKVSGIITERDLVRAIAEGNINSTVS 69

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M +N   + E+     A+Q++  H    L ++    +  GI+   DL R
Sbjct: 70  NYMTRNVIGVTENFDPNQALQVMLDHGFRHLPIIGKDGRVKGILSIRDLAR 120



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ K   VI ED  +  A + +++HNI  L+V+D+  K  GI+   DL+R 
Sbjct: 8   ILNKTVHVIREDDSVRFAAEEMKKHNIGSLIVIDNRGKVSGIITERDLVRA 58


>gi|116204175|ref|XP_001227898.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
 gi|88176099|gb|EAQ83567.1| hypothetical protein CHGG_09971 [Chaetomium globosum CBS 148.51]
          Length = 1086

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     L  N +++ ++
Sbjct: 109 QIKPQTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGLKPNNVTIAEI 168

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++   D+ +
Sbjct: 169 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVL---DITK 214



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 276 PPTTVSVRTSVKEAAQMMKENHTTAILVTD-QGAITGIFTSKDVVLRVIAPGLDPATCSV 334

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 335 VRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 384


>gi|257066598|ref|YP_003152854.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii DSM
           20548]
 gi|256798478|gb|ACV29133.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus prevotii DSM
           20548]
          Length = 483

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPIMSAGMDTVTESQMAIAMARQGGIG-----IIHKNMPINEQARQVDVVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA+ I+   +   V +VD+   LKGI+T  D+   F +D N L ++ +
Sbjct: 95  DPFYLHPDNLLQDALDIMKNYKISGVPIVDKDMYLKGILTNRDVR--FVEDPN-LVIDSI 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N  V  E   +  A+ L+ +  I  L +VD+  K  G++   D+ +  
Sbjct: 152 MTKENLVVGYEGIKMKEAIGLMEESKIEKLPIVDEDYKLKGLITIKDIEKSK 203


>gi|15669812|ref|NP_248626.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2497361|sp|Q59011|IMDH_METJA RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1592337|gb|AAB99638.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 496

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIAL            V+H    +         V  + +    
Sbjct: 44  NIPIVSAAMDTVTEKEMAIALARLGGLG-----VIHRNMSIEEQVHQVQAVKKADEVVIK 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  V     + +AI ++       + VVD   KL GIIT  D+      +  T  V+DV
Sbjct: 99  DVITVSPDDTVGEAINVMETYSISGLPVVDNEDKLVGIITHRDVK---AIEDKTKKVKDV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+     ED     A++L+  + +  L +VDD  + IGI+   D+L+
Sbjct: 156 MTKDVVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGIITLRDILK 204


>gi|317011050|gb|ADU84797.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori
           SouthAfrica7]
          Length = 481

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEITKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAYRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|297623612|ref|YP_003705046.1| inosine-5'-monophosphate dehydrogenase [Truepera radiovictrix DSM
           17093]
 gi|297164792|gb|ADI14503.1| inosine-5'-monophosphate dehydrogenase [Truepera radiovictrix DSM
           17093]
          Length = 505

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P +S+ M       +AIA+            V+H    +       + V  S   + +
Sbjct: 56  NIPVSSSAMDTVTETKMAIAMARHGGLG-----VIHKKLPIEAQADMVTKVKRSEAGMIV 110

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A  ++ E R   V + +   +L GI+T  D+   F  D  +  VE +
Sbjct: 111 DPITLTRDATLQEAEDLMREYRISGVPITEPDGRLVGILTNRDLR--FETDF-SQPVEAL 167

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+    +   T L  A  +LR+H +  L+VVDD     G++   D+ + 
Sbjct: 168 MTKDDLVTVPVGTTLEEARDILRRHKVEKLLVVDDAYILKGLITIKDITKK 218


>gi|218683007|ref|ZP_03530608.1| inositol-5'-monophosphate dehydrogenase [Rhizobium etli CIAT 894]
          Length = 494

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPIEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A++++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALSLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|313763141|gb|EFS34505.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL013PA1]
 gi|313816480|gb|EFS54194.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL059PA1]
 gi|314914429|gb|EFS78260.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL005PA4]
 gi|314917752|gb|EFS81583.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL050PA1]
 gi|314919521|gb|EFS83352.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL050PA3]
 gi|314930112|gb|EFS93943.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL067PA1]
 gi|314957087|gb|EFT01192.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL027PA1]
 gi|314957677|gb|EFT01780.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL002PA1]
 gi|315097890|gb|EFT69866.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL059PA2]
 gi|327451303|gb|EGE97957.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL087PA3]
 gi|327451791|gb|EGE98445.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL083PA2]
 gi|328752276|gb|EGF65892.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL087PA1]
 gi|328755340|gb|EGF68956.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL025PA2]
          Length = 504

 Score = 97.7 bits (242), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPIREVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|119899436|ref|YP_934649.1| hypothetical protein azo3146 [Azoarcus sp. BH72]
 gi|119671849|emb|CAL95763.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 162

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V+  C + +A+ +++E   G V VVD  ++L GI TE D  R           +SV ++M
Sbjct: 33  VRPDCSVFEALGVMAEFDIGSVIVVD-NERLVGIFTERDYARKVVLKGLGSRDVSVSELM 91

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             NP  +     +   M ++ ++    L VVD   + +G+V   D+++
Sbjct: 92  TPNPCTVTPTHTVDEVMAIMTENRFRHLPVVDH-GRIVGMVTIGDMVK 138



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+         G      S       +   V     + + + I++E RF  + VVD
Sbjct: 66  FTERDYA--RKVVLKGLGSRDVSVSELMTPNPCTVTPTHTVDEVMAIMTENRFRHLPVVD 123

Query: 259 EGQKLKGIITEGDIFRNF 276
              ++ G++T GD+ ++ 
Sbjct: 124 -HGRIVGMVTIGDMVKSV 140


>gi|327357586|gb|EGE86443.1| CBS and PB1 domain-containing protein [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 663

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 7/139 (5%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS----DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           E D      G    +           +         +K    + +A  +++ KR  CV V
Sbjct: 67  EADLNKKRHGNPARSRHSRKPPPGTVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLV 126

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            D+  ++ GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +  
Sbjct: 127 TDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKG 186

Query: 314 ISVLMVVDDCQKAIGIVHF 332
              L V+D+ Q   GI+  
Sbjct: 187 FRHLPVMDENQDISGILDI 205



 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R      D NT SV
Sbjct: 269 PPTTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPNTCSV 327

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 328 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 377


>gi|156937391|ref|YP_001435187.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566375|gb|ABU81780.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 138

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +  +          +V     ++D    + E  +G   V+ E  KL GI+TE D+ 
Sbjct: 3   RRRKIPLTVDDIMTTPPLVVSPDESVVDVAKKMLEHGYGSALVI-EDDKLIGIVTERDLL 61

Query: 274 RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               +      L   DVM ++P  +   T +  A+++++  N+  L VVDD  + +G+V 
Sbjct: 62  YALSEGEEGVKLKASDVMTEDPISVKAKTDIMEAIKIMKDANVRHLPVVDDKGRPVGVVA 121

Query: 332 FLDL 335
           F D+
Sbjct: 122 FRDI 125



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+V+D+M   P V+  D  +    + + +H     +V++D  K IGIV   DLL
Sbjct: 9   LTVDDIMTTPPLVVSPDESVVDVAKKMLEHGYGSALVIEDD-KLIGIVTERDLL 61


>gi|157164971|ref|YP_001467503.1| inositol-5-monophosphate dehydrogenase [Campylobacter concisus
           13826]
 gi|112801059|gb|EAT98403.1| inosine-5'-monophosphate dehydrogenase [Campylobacter concisus
           13826]
          Length = 482

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 71/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NIPIVSAAMDTVTEHRTAIMMARLGGIG-----VIHKNMDVESQAKEVKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A++++S+     V V+D+ +KL GI+T  D+   F  +++TL V+D 
Sbjct: 95  DPIFISPEATVAEALSLMSDLHISGVPVIDKDRKLIGILTNRDLR--FETNMSTL-VKDR 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++  Q+ +  L +VD   +  G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDKDGRLDGLITIKDLKK 201



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T          +   +     GC L DA  I S+ R   + +VD+  +L G+IT  D+ 
Sbjct: 141 ETNMSTLVKDRMTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDKDGRLDGLITIKDLK 200

Query: 274 RN 275
           + 
Sbjct: 201 KR 202


>gi|327191166|gb|EGE58210.1| inositol-5-monophosphate dehydrogenase [Rhizobium etli CNPAF512]
          Length = 494

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPTEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A+ ++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALGLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|223043434|ref|ZP_03613480.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus capitis
           SK14]
 gi|222443223|gb|EEE49322.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus capitis
           SK14]
          Length = 488

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 68/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD      L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPDESVYEAEALMGKYRISGVPIVDNDSDRNLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K   +     T L  A  +L++H I  L +V +  K  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEGLITAPVGTTLDEAEAILQEHKIEKLPLV-ENGKLKGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|300857844|ref|YP_003782827.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685298|gb|ADK28220.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302205574|gb|ADL09916.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis C231]
 gi|302330128|gb|ADL20322.1| Inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis 1002]
 gi|308275809|gb|ADO25708.1| Inositol-5-monophosphate dehydrogenase [Corynebacterium
           pseudotuberculosis I19]
          Length = 506

 Score = 97.7 bits (242), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            VLH    +         V  S      
Sbjct: 53  NIPIISAAMDTVTESRMAIAMAREGG-----MGVLHRNLSIEEQAQHVETVKRSESGMVT 107

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   + +  R   + VVD+   L GI T  D+   F +D  ++ V ++
Sbjct: 108 DPVTCSPDMSIAEVDALCARFRISGLPVVDDNGTLLGICTNRDMR--FEQDF-SIKVSEI 164

Query: 289 MIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P V+ E+      A+ LL  + +  L +VD   K +G++   D ++
Sbjct: 165 MTRMPLVVAEEGVTKQQALNLLSANKVEKLPIVDKQGKLVGLITVKDFVK 214


>gi|190890500|ref|YP_001977042.1| inosine 5'-monophosphate dehydrogenase [Rhizobium etli CIAT 652]
 gi|190695779|gb|ACE89864.1| inosine 5'-monophosphate dehydrogenase protein [Rhizobium etli CIAT
           652]
          Length = 494

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPTEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A+ ++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALGLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|86356440|ref|YP_468332.1| inositol-5-monophosphate dehydrogenase [Rhizobium etli CFN 42]
 gi|86280542|gb|ABC89605.1| inosine 5`-monophosphate dehydrogenase protein [Rhizobium etli CFN
           42]
          Length = 494

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPTEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A+ ++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALGLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|302697565|ref|XP_003038461.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
 gi|300112158|gb|EFJ03559.1| hypothetical protein SCHCODRAFT_46524 [Schizophyllum commune H4-8]
          Length = 658

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     + +A  + + KR  CV VVD+ + L GI T  D+         D +T  V  +M
Sbjct: 74  VPENITVAEASQLCAAKRTDCVLVVDDEEGLSGIFTAKDLAYRVTAEGLDPHTTPVHAIM 133

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +NP V  + T  T A++L+   +   L V ++    +G++  
Sbjct: 134 TRNPMVTRDTTSATEALELMVTRHFRHLPVCNEDGNVVGLLDI 176



 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 47/128 (36%), Gaps = 13/128 (10%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----------EGQKLKGIITEGD 271
            +M +      V     + DA  ++ E R   V V++             K+ GI T  D
Sbjct: 238 TLMDARTLPATVGPKTTVRDAARLMKEHRTTAVCVMEGLPASPGMHPNSAKIAGIFTSKD 297

Query: 272 I-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  R     L+    SV  VM  +P     +  +  A++ +   +   L VV+     + 
Sbjct: 298 VVLRVVAAGLDAGRCSVVRVMTPHPDTAPPNMSIHDALKKMHTGHYLNLPVVEADGTLVA 357

Query: 329 IVHFLDLL 336
           I+  L L 
Sbjct: 358 IIDVLTLT 365



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 25/197 (12%), Positives = 58/197 (29%), Gaps = 64/197 (32%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D         L         +M       + +      +A+ ++  + F  + V +
Sbjct: 108 FTAKDLAYRVTAEGLDPHTTPVHAIMTRNPM--VTRDTTSATEALELMVTRHFRHLPVCN 165

Query: 259 EGQKLKGIITEGDIFRNFHKDL-----NTLSVEDVMIKN--------------------- 292
           E   + G++   DI + F + L     ++ + E +M                        
Sbjct: 166 EDGNVVGLL---DIAKVFQEALGKVERSSTASEQLMSAMAGVQSEMGNIGHNPQAAAMLA 222

Query: 293 -----------------------PKVILEDTLLTVAMQLLRQHNISVLMVVD-------- 321
                                  P  +   T +  A +L+++H  + + V++        
Sbjct: 223 WVEKLREKTALPDLTTLMDARTLPATVGPKTTVRDAARLMKEHRTTAVCVMEGLPASPGM 282

Query: 322 --DCQKAIGIVHFLDLL 336
             +  K  GI    D++
Sbjct: 283 HPNSAKIAGIFTSKDVV 299


>gi|261206284|ref|XP_002627879.1| CBS and domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
 gi|239592938|gb|EEQ75519.1| CBS and domain-containing protein [Ajellomyces dermatitidis
           SLH14081]
 gi|239610889|gb|EEQ87876.1| CBS and domain-containing protein [Ajellomyces dermatitidis ER-3]
          Length = 666

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 7/139 (5%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS----DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           E D      G    +           +         +K    + +A  +++ KR  CV V
Sbjct: 70  EADLNKKRHGNPARSRHSRKPPPGTVMALKPSQALQIKPNTTVAEAAQLMAAKREDCVLV 129

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            D+  ++ GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +  
Sbjct: 130 TDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKG 189

Query: 314 ISVLMVVDDCQKAIGIVHF 332
              L V+D+ Q   GI+  
Sbjct: 190 FRHLPVMDENQDISGILDI 208



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R      D NT SV
Sbjct: 272 PPTTVSVRTSVREAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPNTCSV 330

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 331 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 380


>gi|224418976|ref|ZP_03656982.1| inosine 5'-monophosphate dehydrogenase [Helicobacter canadensis MIT
           98-5491]
 gi|253827924|ref|ZP_04870809.1| inosine-5-monophosphate dehydrogenase [Helicobacter canadensis MIT
           98-5491]
 gi|313142488|ref|ZP_07804681.1| inosine-5'-monophosphate dehydrogenase [Helicobacter canadensis MIT
           98-5491]
 gi|253511330|gb|EES89989.1| inosine-5-monophosphate dehydrogenase [Helicobacter canadensis MIT
           98-5491]
 gi|313131519|gb|EFR49136.1| inosine-5'-monophosphate dehydrogenase [Helicobacter canadensis MIT
           98-5491]
          Length = 483

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            +P  SA M        AIA+            ++H    + +       V  S   + +
Sbjct: 40  NSPLVSAAMDTVTEYRTAIAMARVGGIG-----IIHKNMDINSQVAQIKKVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L+ A  I    +   V VVD+   L GI+T  D+   F  DL+   V+++
Sbjct: 95  DPIFISPDATLMQAKAITDNYKISGVPVVDDNGSLIGILTNRDMR--FETDLSR-PVKEI 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P       T L  A  ++ +H I  L +V++     G++   D+ +
Sbjct: 152 MTKAPLVTAKVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQK 201



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + +   +   K+G  L +A  I+++ +   + +V+E   LKG+IT  DI +   
Sbjct: 151 IMTKAPLVTAKVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQKRIE 204


>gi|296822790|ref|XP_002850342.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
 gi|238837896|gb|EEQ27558.1| CBS and PB1 domain-containing protein [Arthroderma otae CBS 113480]
          Length = 658

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++
Sbjct: 70  KKFNPSKARHTRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRI 129

Query: 264 KGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +     L V+
Sbjct: 130 AGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 189

Query: 321 DDCQKAIGIVHF 332
           D+ Q   GI+  
Sbjct: 190 DENQDISGILDI 201



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 265 PPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPSTCSV 323

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 324 VRVMTPHPDFAPTDMTIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 373


>gi|158319584|ref|YP_001512091.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus oremlandii
           OhILAs]
 gi|158139783|gb|ABW18095.1| inosine-5'-monophosphate dehydrogenase [Alkaliphilus oremlandii
           OhILAs]
          Length = 485

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI+L            ++H    +    +    V  S   + +
Sbjct: 42  NIPLMSAGMDTVTESKMAISLAREGGIG-----IIHKNMTIEEQALEVDKVKRSEHGVIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ +++  R   V +  E  KL GIIT  DI   F  +     + + 
Sbjct: 97  DPFFLSPDHIVEDALAVMARYRISGVPI-AEKGKLVGIITNRDIR--FETN-YKKKISEA 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N     E   +  A ++L  H I  L +VDD     G++   D+ + 
Sbjct: 153 MTKDNLVTAREGISMDEAQKILMAHKIEKLPIVDDKGMLKGLITIKDIEKA 203


>gi|302348762|ref|YP_003816400.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Acidilobus saccharovorans
           345-15]
 gi|302329174|gb|ADL19369.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Acidilobus saccharovorans
           345-15]
          Length = 147

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 5/131 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                      D+MH+      V    P+ +A  I+ +K  G + +VD+   L GI+T+ 
Sbjct: 1   MDAMATEPLVRDIMHTPPVK--VTPITPVNEAAQIMMDKGVGSLIIVDDSDNLIGIVTKT 58

Query: 271 DIFRNF-HKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAI 327
           DI R    K L   + V ++M KNP  +LED  +  A +L+  HNI  L V+     K +
Sbjct: 59  DIVREVVAKGLSRNVPVGNIMTKNPYFVLEDYTVKEAAELMGTHNIGHLPVLSRNNMKPV 118

Query: 328 GIVHFLDLLRF 338
           G++   D++R 
Sbjct: 119 GMISKRDIIRL 129


>gi|70606127|ref|YP_254997.1| hypothetical protein Saci_0288 [Sulfolobus acidocaldarius DSM 639]
 gi|68566775|gb|AAY79704.1| conserved CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 131

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 55/112 (49%), Gaps = 1/112 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVE 286
                V +   + DA  ++  +  G + +VD   +  GI+TE DI     +D+     + 
Sbjct: 9   RKPVTVDLKTSIKDATKVMRREGVGSLVIVDNDFRPVGIVTERDIVYAIAQDIPIDTPIS 68

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M ++P  I   + ++ A+ L+    I  L+V+++  + IG++   D+++ 
Sbjct: 69  EIMSRDPVSINGGSDVSEAVALMTSRGIRHLVVINNEGRTIGVISVRDVVKA 120



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 29/52 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  ++ + P  +   T +  A +++R+  +  L++VD+  + +GIV   D++
Sbjct: 3   VSQLVSRKPVTVDLKTSIKDATKVMRREGVGSLVIVDNDFRPVGIVTERDIV 54


>gi|22298062|ref|NP_681309.1| polyA polymerase [Thermosynechococcus elongatus BP-1]
 gi|22294240|dbj|BAC08071.1| tll0519 [Thermosynechococcus elongatus BP-1]
          Length = 907

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 48/112 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+   P+ DA  +L       ++VV    +L GII+  D+    H       V
Sbjct: 315 MSSPVRTVRPETPIADAHRVLLRYGHSGLSVVSAEGELLGIISRRDLDVALHHGFAHAPV 374

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M    + I   T L     L+ Q++I  L VV+D    +GIV   D+LR
Sbjct: 375 KGYMKAPVRTISPTTPLPEIQALMVQYDIGRLPVVNDQGDLVGIVTRTDVLR 426



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 27/65 (41%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +    PL +   ++ +   G + VV++   L GI+T  D
Sbjct: 364 ALHHGFAHAPVKGYMKAPVRTISPTTPLPEIQALMVQYDIGRLPVVNDQGDLVGIVTRTD 423

Query: 272 IFRNF 276
           + R+ 
Sbjct: 424 VLRHL 428



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 30/64 (46%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R   +  +  +  ++M    + +  +T +  A ++L ++  S L VV    + +GI+ 
Sbjct: 298 LTRLREQIPHPPTAAELMSSPVRTVRPETPIADAHRVLLRYGHSGLSVVSAEGELLGIIS 357

Query: 332 FLDL 335
             DL
Sbjct: 358 RRDL 361


>gi|254779198|ref|YP_003057303.1| inosine 5'-monophosphate dehydrogenase [Helicobacter pylori B38]
 gi|254001109|emb|CAX29064.1| IMP dehydrogenase (IMPDH) (IMPD) [Helicobacter pylori B38]
          Length = 481

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIQTQVKEIAKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIQAYRTLADAKVITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQK 201



 Score = 37.2 bits (85), Expect = 4.3,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 27/64 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +G  L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVGISLDEASDLMHKHKIEKLPIVDKDNVLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|56418544|ref|YP_145862.1| inosine 5'-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
 gi|261417509|ref|YP_003251191.1| inosine 5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
 gi|297528385|ref|YP_003669660.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
 gi|319765167|ref|YP_004130668.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
 gi|56378386|dbj|BAD74294.1| inositol-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
 gi|261373966|gb|ACX76709.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC61]
 gi|297251637|gb|ADI25083.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. C56-T3]
 gi|317110033|gb|ADU92525.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y412MC52]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPILSAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSERGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++S+ R   V +V+  E QKL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPDHQVYDAEHLMSKYRISGVPIVNNPEEQKLVGIITNRDLR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VM K N       T L  A ++L++H +  L +VD+     G++   D+
Sbjct: 155 EVMTKENLITAPVGTTLEEAEKILQRHKVEKLPLVDENGVLKGLITIKDI 204


>gi|197286643|ref|YP_002152515.1| RpiR family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227355166|ref|ZP_03839577.1| RpiR family transcriptional regulator [Proteus mirabilis ATCC
           29906]
 gi|194684130|emb|CAR45545.1| RpiR-family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227164953|gb|EEI49800.1| RpiR family transcriptional regulator [Proteus mirabilis ATCC
           29906]
          Length = 286

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 6/191 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S V  A +    +   +      +      QF   +++I     RV I GIG SG + 
Sbjct: 95  EDSLVVIAQKLAQEKNNSIRDTTRQIN---YHQFEQVIQQIDDAS-RVQIIGIGGSGLVA 150

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L+  L   G  +              M++  DL IV+S+SG   ++      A++   
Sbjct: 151 RDLSYKLQKIGITTLIETDHHVQISVAQMLSPRDLQIVISYSGKRKDMLVAASVAKKQGA 210

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IAIT E  S +   AD +L    +        A  +S   Q  I D + +ALL+ R+ 
Sbjct: 211 KIIAITGEKHSPLGLMADYILETIADEGEWR--SAAISSRTAQNTITDLIFMALLKKRDE 268

Query: 200 SENDFYVLHPG 210
           +     +    
Sbjct: 269 NAKALVLSSQA 279


>gi|302652051|ref|XP_003017887.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
 gi|291181469|gb|EFE37242.1| hypothetical protein TRV_08098 [Trichophyton verrucosum HKI 0517]
          Length = 648

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++
Sbjct: 63  KKFNPSKARHTRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRI 122

Query: 264 KGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +     L V+
Sbjct: 123 AGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 182

Query: 321 DDCQKAIGIVHF 332
           D+ Q   GI+  
Sbjct: 183 DENQDISGILDI 194



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A T++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 258 PPTTVSVRTSVKEAATLMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPSTCSV 316

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 317 VRVMTPHPDFAPTDMTIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 366


>gi|302503214|ref|XP_003013567.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
 gi|291177132|gb|EFE32927.1| hypothetical protein ARB_00014 [Arthroderma benhamiae CBS 112371]
          Length = 648

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++
Sbjct: 63  KKFNPSKARHTRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRI 122

Query: 264 KGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +     L V+
Sbjct: 123 AGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 182

Query: 321 DDCQKAIGIVHF 332
           D+ Q   GI+  
Sbjct: 183 DENQDISGILDI 194



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A T++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 258 PPTTVSVRTSVKEAATLMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPSTCSV 316

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 317 VRVMTPHPDFAPTDMTIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 366


>gi|315660069|ref|ZP_07912927.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus lugdunensis
           M23590]
 gi|315494970|gb|EFU83307.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus lugdunensis
           M23590]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVALSDKLKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S + + +          + +A  ++ + R   V +VD  +   L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVIMNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEVRTLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDNLITAPVGTTLDEAEAILQEHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|170759019|ref|YP_001788612.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum A3
           str. Loch Maree]
 gi|169406008|gb|ACA54419.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum A3
           str. Loch Maree]
          Length = 484

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NMPLMSAGMDTVTESKMAIAMAREGG-----MGIIHKNMTIAEQASEVDKVKRQENGVIA 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S  R   V +  E  KL GIIT  DI     ++     +E+V
Sbjct: 96  DPFYLAPNNTIQDALNLMSRYRISGVPITIE-GKLVGIITNRDI---LFENNYEKKIEEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A  +L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTTIGEAKDILKSHKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|116749553|ref|YP_846240.1| inosine-5'-monophosphate dehydrogenase [Syntrophobacter
           fumaroxidans MPOB]
 gi|116698617|gb|ABK17805.1| inosine-5'-monophosphate dehydrogenase [Syntrophobacter
           fumaroxidans MPOB]
          Length = 491

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 72/172 (41%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI++            ++H    +       + V  S   + L
Sbjct: 44  NIPLVSAAMDTVTESDTAISIAREGGIG-----IIHRNMSVEQQAQEVNKVKKSESGMIL 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++S  R   V VV +G++L GIIT  D+   F  D  ++ V +V
Sbjct: 99  DPVTVDPDQKIGEVLDLMSRYRISGVPVV-KGERLVGIITNRDLR--FETD-ESIKVSEV 154

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+  V       L  + +LL++  I  L+VVDD  +  G++   D+++  
Sbjct: 155 MTKDDLVTAPVGISLEDSKKLLQKRRIEKLLVVDDSGRLKGLITIKDIMKIK 206


>gi|85859456|ref|YP_461658.1| inosine-5'-monophosphate dehydrogenase [Syntrophus aciditrophicus
           SB]
 gi|85722547|gb|ABC77490.1| Inosine-5'-monophosphate dehydrogenase [Syntrophus aciditrophicus
           SB]
          Length = 486

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 72/172 (41%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M      A AI L            ++H    +    +    V  S   + +
Sbjct: 42  KIPIVAAAMDTVTESATAICLAREGGIG-----IIHRNMSIERQVLEVDKVKKSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + +A+ ++   +   V VV + +KL GI+T  D+   F ++L+   V +V
Sbjct: 97  DPITIEPEQKVSEALDLMHRYKISGVPVV-KNKKLVGILTNRDLR--FEENLHQ-PVSNV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N   +  +  L  + +LL +H I  L+VVD+     G++   D+ +  
Sbjct: 153 MTRENLVTVSANISLEESKRLLHKHRIEKLLVVDESYNLKGLITIKDIEKIK 204


>gi|327294133|ref|XP_003231762.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
           118892]
 gi|326465707|gb|EGD91160.1| CBS and PB1 domain-containing protein [Trichophyton rubrum CBS
           118892]
          Length = 660

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++
Sbjct: 75  KKFNPSKARHTRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRI 134

Query: 264 KGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +     L V+
Sbjct: 135 AGIFTAKDLAYRVVGAGIRARDVTIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVM 194

Query: 321 DDCQKAIGIVHF 332
           D+ Q   GI+  
Sbjct: 195 DENQDISGILDI 206



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 270 PPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 328

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 329 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 378


>gi|262201673|ref|YP_003272881.1| inosine-5'-monophosphate dehydrogenase [Gordonia bronchialis DSM
           43247]
 gi|262085020|gb|ACY20988.1| inosine-5'-monophosphate dehydrogenase [Gordonia bronchialis DSM
           43247]
          Length = 503

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 58/143 (40%), Gaps = 12/143 (8%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            RN S  D       G++ T+    + ++              L +   + +  R   + 
Sbjct: 81  HRNLSIED-----QAGQVETVKRSEAGMV---TDPVTCSPTNTLAEVDAMCARYRISGLP 132

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNI 314
           VVD+  +L GIIT  D+     +D     V +VM K P     E      A+ LLR++ +
Sbjct: 133 VVDDRGELVGIITNRDMRFEVDQD---RPVSEVMTKAPLITAQEGVSAEAALGLLRRNKV 189

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VD   +  G++   D ++
Sbjct: 190 EKLPIVDGNGRLTGLITVKDFVK 212


>gi|150015221|ref|YP_001307475.1| inosine 5'-monophosphate dehydrogenase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149901686|gb|ABR32519.1| inosine-5'-monophosphate dehydrogenase [Clostridium beijerinckii
           NCIMB 8052]
          Length = 485

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSAGMDTVTESKMAIAVAREGGIG-----IIHKNMTIEEQAKEVDRVKRQENGVIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  ++++ R   V +  +  KL GIIT  DI     +      + +V
Sbjct: 96  DPIFLSQDHLIQDAENLMAQYRISGVPITTQDGKLIGIITNRDI---IFETNYQRKISEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     E+T +  A ++L++H +  L +VD   +  G++   D+
Sbjct: 153 MTKDNLITASENTTVEEAKEILKKHKVEKLPLVDSEGRLKGLITMKDI 200



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 56/118 (47%), Gaps = 5/118 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +V         +++  PL+ A +  ++E +   +AV  EG    GII +        K+
Sbjct: 26  REVSTKTKITKTIELNIPLMSAGMDTVTESKM-AIAVAREGG--IGIIHKNMTIEEQAKE 82

Query: 280 LNTLSVED-VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +  ++  +I +P  + +D L+  A  L+ Q+ IS + +     K IGI+   D++
Sbjct: 83  VDRVKRQENGVITDPIFLSQDHLIQDAENLMAQYRISGVPITTQDGKLIGIITNRDII 140


>gi|289551760|ref|YP_003472664.1| Inosine-5'-monophosphate dehydrogenase [Staphylococcus lugdunensis
           HKU09-01]
 gi|289181291|gb|ADC88536.1| Inosine-5'-monophosphate dehydrogenase [Staphylococcus lugdunensis
           HKU09-01]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVALSDKLKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S + + +          + +A  ++ + R   V +VD  +   L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVIMNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEVRTLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDNLITAPVGTTLDEAEAILQEHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|224438388|ref|ZP_03659315.1| inosine 5'-monophosphate dehydrogenase [Helicobacter cinaedi CCUG
           18818]
 gi|313144830|ref|ZP_07807023.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818]
 gi|313129861|gb|EFR47478.1| inosinic acid dehydrogenase GuaB [Helicobacter cinaedi CCUG 18818]
          Length = 481

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    + +       V  S   + +
Sbjct: 40  NIPLVSAAMDTVTESCTAIAMARLGGIG-----IIHKNMDIASQVEQIKRVKKSESGVIV 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  I    +   V VVDE  KL GI+T  D+   F +DLN   V D+
Sbjct: 95  DPIYIRADNTLADAKAITDNYKISGVPVVDEYGKLIGILTNRDVR--FEQDLNK-RVGDL 151

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+        T L  A +++ +H I  L +VD+     G++   D+ +
Sbjct: 152 MTKDSLITAKVGTTLEEAKEIMHKHRIEKLPIVDENYTLKGLITIKDIQK 201



 Score = 39.5 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 29/64 (45%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     + + DS+   K+G  L +A  I+ + R   + +VDE   LKG+IT  DI 
Sbjct: 141 EQDLNKRVGDLMTKDSLITAKVGTTLEEAKEIMHKHRIEKLPIVDENYTLKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|237653248|ref|YP_002889562.1| nucleotidyltransferase [Thauera sp. MZ1T]
 gi|237624495|gb|ACR01185.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Thauera sp. MZ1T]
          Length = 648

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/216 (19%), Positives = 75/216 (34%), Gaps = 23/216 (10%)

Query: 140 PLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+ AI++   S    VA        +  +       ++P             +A  L +S
Sbjct: 108 PIGAISARRPSTNAYVAVEDSFCFQISADDFLHLMQISPVFHLFCT----QYIASLLSQS 163

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R   ++ F             +  +           V    P   A+  +SE   GC+ V
Sbjct: 164 RQQLQSTFAQR----AAEQQTMTTALGKLIEKEAVFVTPDTPTRSALERMSELHLGCMVV 219

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VD  ++  GI+T+ D+  R      +    + ++M  NP  +        A   +  H +
Sbjct: 220 VDAERRPVGILTQSDLLPRVILAGFDLARPIGELMTANPHQLPASASAYDAALEMATHGV 279

Query: 315 SVLMVVDDCQKAIGIVHFLDL----------LRFGI 340
             L+VVD     +G+V   DL          +R GI
Sbjct: 280 RHLLVVDSDSVLLGVVSERDLFSLQRISLRQIRAGI 315


>gi|295402721|ref|ZP_06812663.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294975252|gb|EFG50888.1| inosine-5'-monophosphate dehydrogenase [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSERGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++S+ R   V +V+  E QKL GIIT  D+   F +D  +  + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRDLR--FIQD-YSTKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K N       T L  A ++L+++ +  L +VD+     G++   D+
Sbjct: 155 DVMTKENLITAPVGTTLEEAEKILQKYKVEKLPLVDENGVLKGLITIKDI 204


>gi|288554615|ref|YP_003426550.1| inosine 5'-monophosphate dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288545775|gb|ADC49658.1| inosine 5'-monophosphate dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 485

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEAAMAIAMAREGGLG-----IIHKNMSIEEQAEQVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE QKL GI+T  D+   F +D  ++ +++V
Sbjct: 98  NPFFLTPDRQVFDAEHLMGKYRISGVPIVDEEQKLVGILTNRDLR--FIED-YSIHIDEV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K +       T L  A  +L+++ I  L +VDD     G++   D+
Sbjct: 155 MTKEDLVTAPVGTTLQEAESILQKYKIEKLPLVDDEGVLKGLITIKDI 202


>gi|288919716|ref|ZP_06414043.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EUN1f]
 gi|288348905|gb|EFC83155.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. EUN1f]
          Length = 546

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 74/205 (36%), Gaps = 16/205 (7%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++ +T ++  ++   +++V   +              P  S+ M       +AIA+    
Sbjct: 54  MLGLTYDDVLLLPAESEVVPASVDTATRLSRNISLAIPLVSSAMDTVTEARMAIAMARQG 113

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGC 253
                   VLH    +         V  S   +            + +A  +++  R   
Sbjct: 114 GVG-----VLHRNLSVDDQAQQVDMVKRSESGMITAPITCGPEATIEEANVLMARYRISG 168

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           V V     +L GI+T  DI   F +D  +  V DVM   P V          A+ LLR +
Sbjct: 169 VPVTQPDGQLLGIVTNRDIR--FERD-YSRRVRDVMTPMPLVTAAVGVSADDALGLLRHN 225

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD+  +  G++   D  +
Sbjct: 226 KIEKLPIVDEAGRLRGLITVKDFTK 250


>gi|329727993|gb|EGG64440.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           VCU144]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E +KL GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDNLITAPVGTTLDEAEAILQKHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|300865327|ref|ZP_07110138.1| Phosphoesterase, RecJ-like protein [Oscillatoria sp. PCC 6506]
 gi|300336630|emb|CBN55288.1| Phosphoesterase, RecJ-like protein [Oscillatoria sp. PCC 6506]
          Length = 827

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++VVD+  +L GIIT  DI    H   +   V
Sbjct: 184 MSSPVRTIRPEISVGEAHRILLRYGHSGLSVVDDRDRLVGIITRRDIDIALHHGFSHAPV 243

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M    K I  DT+L     L+  ++I  L V+ +  + +GIV   D+LR 
Sbjct: 244 KGYMTPQLKTIAPDTVLPEIESLMVTYDIGRLPVL-ENGQLVGIVTRTDVLRE 295



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  ++M    + I  +  +  A ++L ++  S L VVDD  + +GI+   D+
Sbjct: 179 TARELMSSPVRTIRPEISVGEAHRILLRYGHSGLSVVDDRDRLVGIITRRDI 230



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L +  +++     G + V+ E  +L GI+T  D
Sbjct: 233 ALHHGFSHAPVKGYMTPQLKTIAPDTVLPEIESLMVTYDIGRLPVL-ENGQLVGIVTRTD 291

Query: 272 IFRNFHKDLNTLSVED 287
           + R  H+  +   + +
Sbjct: 292 VLRELHQQKDKGKLGE 307


>gi|124485370|ref|YP_001029986.1| homoserine O-acetyltransferase [Methanocorpusculum labreanum Z]
 gi|124362911|gb|ABN06719.1| homoserine O-acetyltransferase [Methanocorpusculum labreanum Z]
          Length = 487

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++ P ++    + +A  ++       + VV     L GI+T  DI ++   D   L  
Sbjct: 373 MTNNPPSIQETSSIREAAELMIGHEINHLPVVSGNGTLSGIVTSWDIAKSVAGDFQDL-- 430

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            ++M K+   I     L +A  L+ +H IS L VVDD    +G++ 
Sbjct: 431 AEIMTKDVITIQRSDSLRLAASLMEKHAISALPVVDDSNHVLGMLT 476



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 31/62 (50%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L  ++VED+M  NP  I E + +  A +L+  H I+ L VV       GIV   D+
Sbjct: 360 VGQFLTPMTVEDLMTNNPPSIQETSSIREAAELMIGHEINHLPVVSGNGTLSGIVTSWDI 419

Query: 336 LR 337
            +
Sbjct: 420 AK 421


>gi|109947724|ref|YP_664952.1| inosine 5'-monophosphate dehydrogenase [Helicobacter acinonychis
           str. Sheeba]
 gi|109714945|emb|CAJ99953.1| inosine-5-monophosphate dehydrogenase [Helicobacter acinonychis
           str. Sheeba]
          Length = 481

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + T     + V  S     +
Sbjct: 40  NIPFISAAMDTVTEHKTAIAMARLGGIG-----IVHKNMDIETQVKEIAKVKKSESGVIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD+   L GI+T  D+   F  DL+   V DV
Sbjct: 95  DPIFIHAHKTLADAKAITDNYKISGVPVVDDKGLLIGILTNRDVR--FETDLSK-KVGDV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P         L  A  L+ +H I  L +VD      G++   D+ +
Sbjct: 152 MTKMPLVTAHVSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQK 201



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 26/64 (40%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +    +   L +A  ++ + +   + +VD+   LKG+IT  DI 
Sbjct: 141 ETDLSKKVGDVMTKMPLVTAHVSISLDEASDLMHKHKIEKLPIVDKNNILKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|15669417|ref|NP_248227.1| hypothetical protein MJ_1232 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496164|sp|Q58629|Y1232_METJA RecName: Full=Uncharacterized protein MJ1232
 gi|1591864|gb|AAB99237.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 296

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +   C L +   + +EK      VVD   KL G+I+  DI  N   D     V++VM ++
Sbjct: 183 INPNCTLRETAKLFAEKYISGAPVVDND-KLVGVISLHDIAENI--DNIDKKVKEVMRRD 239

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I +D  +  A++++ ++N+  L++VDD  K +GI+   D+L+ 
Sbjct: 240 VITIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDILKI 285



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 271 DIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           DI R    D      +  + V DV IK    I  +  L    +L  +  IS   VVD+  
Sbjct: 152 DIHRILLIDVLGVSSIPNIKVGDVGIKEVWTINPNCTLRETAKLFAEKYISGAPVVDND- 210

Query: 325 KAIGIVHFLDL 335
           K +G++   D+
Sbjct: 211 KLVGVISLHDI 221



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  +     + DA+ I+++   G + +VD+  K+ GIIT  DI +  
Sbjct: 236 MRRDVITIHKDEKIYDALKIMNKNNVGRLVIVDDNNKIVGIITRTDILKII 286


>gi|116625741|ref|YP_827897.1| inosine-5'-monophosphate dehydrogenase [Candidatus Solibacter
           usitatus Ellin6076]
 gi|116228903|gb|ABJ87612.1| inosine-5'-monophosphate dehydrogenase [Candidatus Solibacter
           usitatus Ellin6076]
          Length = 499

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +          ++H    +         V  S   + +
Sbjct: 57  NIPIVSAAMDTVTESHLAIALAQQGGIG-----IVHRNMTIERQAEEVDRVKRSESGMIV 111

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                    P+  A+T+++  R   V V  +   L GI+T  D+     ++   L + +V
Sbjct: 112 DPITIGPDEPISAALTLMTRYRISGVPVT-KNSVLVGILTNRDLRF---ENRYDLPISEV 167

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   +   T L  A  +L +H +  L+VVDD     G++   D+ + 
Sbjct: 168 MTKENLVTVPVGTTLEQAEAILHKHRVEKLLVVDDQFALKGLITVKDIQKK 218


>gi|255322409|ref|ZP_05363555.1| inosine-5'-monophosphate dehydrogenase [Campylobacter showae
           RM3277]
 gi|255300782|gb|EET80053.1| inosine-5'-monophosphate dehydrogenase [Campylobacter showae
           RM3277]
          Length = 482

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H    + +       V  S   + +
Sbjct: 40  NIPIVSAAMDTVTEHRAAIMMARLGGIG-----VIHKNMDIQSQVKEVRRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ ++++     V VVDE  KL GI+T  D+   F  D + L V+D 
Sbjct: 95  DPISISPNASVGSALDMMADLHISGVPVVDEENKLIGILTNRDLR--FENDRSVL-VKDR 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++  Q+ +  L +VD      G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFSQNRVEKLPIVDKDGHLEGLITIKDLKK 201


>gi|312218371|emb|CBX98317.1| similar to CBS and PB1 domain containing protein [Leptosphaeria
           maculans]
          Length = 666

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V DE  ++ GI T  D+  R     +    +++E++
Sbjct: 103 QIKPNTTVAEAAQLMAAKREDCVLVTDEDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEI 162

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+     GI+  
Sbjct: 163 MTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDI 206



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
           +G     V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T
Sbjct: 267 TGLPPTTVSVRTSVKEAAALMKENHTTAVLVQD-QGSITGIFTSKDVVLRVIAAGLDPAT 325

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SV  VM  +P     D  +  A++ +   +   L V+ D  + +G+V   D+L+ 
Sbjct: 326 CSVVRVMTPHPDFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMV---DVLKL 378



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 74/238 (31%), Gaps = 49/238 (20%)

Query: 145 TSENKSVVACHADIVLTLPKEP--ESCPHGLAPTTSAIMQLAIGDALAIALLESRN---F 199
           +   +         VL L   P  +  P+      + +M     D + +   + R    F
Sbjct: 79  SGRVRPSKKAPPGTVLALKPSPALQIKPNTTVAEAAQLMAAKREDCVLVTDEDDRIAGIF 138

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  D      G  +    V   ++M         K      DA+ ++  K F  + V+DE
Sbjct: 139 TAKDLAFRVVGAGIKARDVTIEEIMTKNPLCA--KTDTSATDALDLMVRKGFRHLPVMDE 196

Query: 260 GQKLKGI--IT--EGDIFRNFHK------------------------------------D 279
              + GI  IT    D      +                                     
Sbjct: 197 NHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQAEMGSSQPQQIISYVEAIRQK 256

Query: 280 LNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++  ++E V+    P  +   T +  A  L+++++ + ++V D      GI    D++
Sbjct: 257 MSGPTLESVLTGLPPTTVSVRTSVKEAAALMKENHTTAVLVQD-QGSITGIFTSKDVV 313


>gi|299139248|ref|ZP_07032424.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX8]
 gi|298598928|gb|EFI55090.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX8]
          Length = 508

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 69/169 (40%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    S ++      
Sbjct: 42  NTPLMSAAMDTVTESRLAIAIAQQGGLGVVHRNLSIEQQAGEIDKVKRSESGMI---VDP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +    P+ DA+ ++   +   V V  +  KL GI+T  D+      D+    + DVM 
Sbjct: 99  VTIDPERPIADALEVMRRYKISGVPVT-KNGKLVGILTNRDLRFVSRTDI---PISDVMT 154

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K N   +   T L  A  +L +H +  L+VV+D  +  G++   D+ + 
Sbjct: 155 KKNLITVPVGTTLEEAENILHEHRVEKLLVVNDAYELKGLITVKDIQKK 203



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + +  ++  V +G  L +A  IL E R   + VV++  +LKG+IT  DI +  
Sbjct: 150 SDVMTKKNLITVPVGTTLEEAENILHEHRVEKLLVVNDAYELKGLITVKDIQKKL 204


>gi|284050067|ref|ZP_06380277.1| polynucleotide adenylyltransferase region [Arthrospira platensis
           str. Paraca]
 gi|291566508|dbj|BAI88780.1| polyA polymerase [Arthrospira platensis NIES-39]
          Length = 918

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++ G  + +A  IL       ++V+D+  +L GII+  DI    H   N   V
Sbjct: 322 MSSPVRTIRPGTSVGEAHRILLRYGHSGLSVLDDNHQLVGIISRRDIDIALHHGFNHSPV 381

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M    + I  +T L     ++  ++I  L V+++    +GIV   D+LR 
Sbjct: 382 KGYMTPQLRTITPETSLPEIESIMVTYDIGRLPVLENGN-LVGIVTRTDVLRL 433



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 7/80 (8%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VD    L+ ++T      NF   +  + +  ++M    + I   T +  A ++L ++  S
Sbjct: 295 VDPHSTLETLVT------NFKAQIPPSPTARELMSSPVRTIRPGTSVGEAHRILLRYGHS 348

Query: 316 VLMVVDDCQKAIGIVHFLDL 335
            L V+DD  + +GI+   D+
Sbjct: 349 GLSVLDDNHQLVGIISRRDI 368



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  +    +    +  +     L +  +I+     G + V+ E   L GI+T  D
Sbjct: 371 ALHHGFNHSPVKGYMTPQLRTITPETSLPEIESIMVTYDIGRLPVL-ENGNLVGIVTRTD 429

Query: 272 IFRNF 276
           + R  
Sbjct: 430 VLRLL 434


>gi|312109160|ref|YP_003987476.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
 gi|311214261|gb|ADP72865.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. Y4.1MC1]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSERGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++S+ R   V +V+  E QKL GIIT  D+   F +D  +  + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRDLR--FIQD-YSTKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K N       T L  A ++L+++ +  L +VD+     G++   D+
Sbjct: 155 DVMTKENLITAPVGTTLEEAEKILQKYKVEKLPLVDENGILKGLITIKDI 204


>gi|147920358|ref|YP_685869.1| hypothetical protein RCIX1241 [uncultured methanogenic archaeon
           RC-I]
 gi|110621265|emb|CAJ36543.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 502

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM---------HSG 227
                  +  +A  +A        E  F++  P   L                       
Sbjct: 326 VKTSSLSSFYNARKVAFELKAWIKEGKFFLNGPAETLSRTSSARPMKETVALPLVKDIMV 385

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +   + G  + DA   + + RF  + VVD+ ++L GIIT  D+ +         S++ 
Sbjct: 386 KKVATTRAGVSVDDAARTIIKDRFNHLPVVDDEKRLIGIITAWDVSKAVALSKRD-SLDM 444

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           VM KN   +  D  + +A++LL +HNIS L V+D  +K +GIV 
Sbjct: 445 VMTKNVVTVGPDDPVDLAVRLLEKHNISALPVIDHDRKVLGIVT 488



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 30/65 (46%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   + +    V+D+M+K          +  A + + +   + L VVDD ++ IGI+   
Sbjct: 369 RPMKETVALPLVKDIMVKKVATTRAGVSVDDAARTIIKDRFNHLPVVDDEKRLIGIITAW 428

Query: 334 DLLRF 338
           D+ + 
Sbjct: 429 DVSKA 433


>gi|27469266|ref|NP_765903.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           ATCC 12228]
 gi|57866022|ref|YP_187667.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           RP62A]
 gi|251811290|ref|ZP_04825763.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282874644|ref|ZP_06283526.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           SK135]
 gi|293367653|ref|ZP_06614305.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|38604794|sp|Q8CMQ7|IMDH_STAES RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|81675469|sp|Q5HRX2|IMDH_STAEQ RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|27316816|gb|AAO05991.1|AE016752_24 inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           ATCC 12228]
 gi|57636680|gb|AAW53468.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           RP62A]
 gi|251805157|gb|EES57814.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281296568|gb|EFA89080.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           SK135]
 gi|291318223|gb|EFE58617.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329734373|gb|EGG70687.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           VCU028]
 gi|329736158|gb|EGG72431.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           VCU045]
          Length = 488

 Score = 97.3 bits (241), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E +KL GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDNLITAPVGTTLDEAEAILQKHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|209548039|ref|YP_002279956.1| inosine 5'-monophosphate dehydrogenase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
 gi|209533795|gb|ACI53730.1| inosine-5'-monophosphate dehydrogenase [Rhizobium leguminosarum bv.
           trifolii WSM2304]
          Length = 494

 Score = 96.9 bits (240), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPVEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A+ ++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALGLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E      A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKESVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|239825593|ref|YP_002948217.1| inosine 5'-monophosphate dehydrogenase [Geobacillus sp. WCH70]
 gi|239805886|gb|ACS22951.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. WCH70]
          Length = 488

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSERGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++S+ R   V +V+  E QKL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMSKYRISGVPIVNNEEEQKLVGIITNRDLR--FIQD-YSIKIA 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K N       T L  A ++L+++ +  L +VD+     G++   D+
Sbjct: 155 DVMTKENLITAPVGTTLEEAEKILQKYKVEKLPLVDENGVLKGLITIKDI 204


>gi|20093963|ref|NP_613810.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|20178342|sp|P50100|Y525_METKA RecName: Full=Uncharacterized protein MK0525; AltName: Full=OrfX
 gi|19886922|gb|AAM01740.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 196

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
                 ++    + E   G V +V+E  +  GIITE D+        K+ + +   D+M 
Sbjct: 18  SPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKVVSQGKNPDEVIARDIMS 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    + ED  +  A++L+    I  L +VDD  K IGIV   D+L+
Sbjct: 78  QPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDILQ 124



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++SV +V  ++                +R+H I  +++V++  + IGI+   DL+
Sbjct: 1   MRSVSVGEVARRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLV 57



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G               +  V+    + +A+ ++ +K    + +VD+  KL GI+T  DI 
Sbjct: 64  GKNPDEVIARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQDIL 123


>gi|113969857|ref|YP_733650.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
 gi|114047087|ref|YP_737637.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
 gi|113884541|gb|ABI38593.1| cyclic nucleotide-binding protein [Shewanella sp. MR-4]
 gi|113888529|gb|ABI42580.1| cyclic nucleotide-binding protein [Shewanella sp. MR-7]
          Length = 620

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 56/118 (47%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              S  ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSSPIMIDAHASVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGRI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++DD      KAIG+V   D+LR
Sbjct: 215 AVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDDQNTDEVKAIGMVTSTDILR 272



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P +I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSSPIMIDAHASVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL----LRFGI 340
            DL    L  G+
Sbjct: 199 KDLRNRVLAAGL 210



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++D+      K  G++T  DI R
Sbjct: 213 RIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDDQNTDEVKAIGMVTSTDILR 272


>gi|145607543|ref|XP_361856.2| hypothetical protein MGG_04330 [Magnaporthe oryzae 70-15]
 gi|145015069|gb|EDJ99637.1| hypothetical protein MGG_04330 [Magnaporthe oryzae 70-15]
          Length = 640

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 6/138 (4%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS---DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           END                A     +         +K G  + +A  +++ KR  CV V 
Sbjct: 20  ENDLAKKKHVTGRARHSRKAPPGTVLALKPSQALQIKPGTTVAEAAQLMAAKREDCVLVT 79

Query: 258 DEGQKLKGIITEGDIF-RNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           D+  ++ GI T  D+  R     L     ++ ++M KNP     DT  T A+ L+ +   
Sbjct: 80  DDDDRIAGIFTAKDLAFRVVGAGLKATNVTIAEIMTKNPLCARTDTSATDALDLMVRKGF 139

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L V+D+ Q   GI+  
Sbjct: 140 RHLPVMDENQDISGILDI 157



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ E     V V D   ++ GI T  D+  R     L+    S
Sbjct: 220 MPPTTVGVKTSVKEAAQMMKENHTTAVLVQD-QGQITGIFTSKDVVLRVIAPGLDPGNCS 278

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 279 VVRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNDSGEIVGMV---DVLKL 329


>gi|154151258|ref|YP_001404876.1| inosine-5'-monophosphate dehydrogenase [Candidatus Methanoregula
           boonei 6A8]
 gi|153999810|gb|ABS56233.1| inosine-5'-monophosphate dehydrogenase [Methanoregula boonei 6A8]
          Length = 489

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 11/168 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL            V+H            + V  + + I  
Sbjct: 44  NIPLVSSAMDTVTEAMMAIALAREGGIG-----VIHRNMTAEHEVQEVNVVKQAEELIER 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    + DA  ++++   G + VV    K+ GI++  D+ R         S+  +
Sbjct: 99  DVLFVEDTATVSDAEKLMNQYSIGGLPVV-GKGKIIGIVSRRDV-RAIVSRCGEESIRTI 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K P    ED     A++++  + +  L V D   +  GI+   D+L
Sbjct: 157 MTKKPITASEDITPEKALEVMYTNKVERLPVADKIGRLTGIITMQDIL 204


>gi|256544582|ref|ZP_05471954.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus vaginalis ATCC
           51170]
 gi|256399471|gb|EEU13076.1| inosine-5'-monophosphate dehydrogenase [Anaerococcus vaginalis ATCC
           51170]
          Length = 483

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSASMDTVTESKMAIAMARQGGIG-----IIHKNMSIEDQAKEVDRVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A+ I++  +   V +VD+   LKGI+T  D+   F  D N + ++D+
Sbjct: 95  DPFYLKPENILKEALEIMANYKISGVPIVDDNMTLKGILTNRDVR--FQNDEN-VKIDDI 151

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K   ++ +    +  A++ +    +  L +VDD  K  G++   D+
Sbjct: 152 MTKEGLIVGQVGISMEEAVKKMESGKVEKLPIVDDDFKLKGLITIKDI 199


>gi|222084958|ref|YP_002543487.1| inosine-5'-monophosphate dehydrogenase [Agrobacterium radiobacter
           K84]
 gi|221722406|gb|ACM25562.1| inosine-5'-monophosphate dehydrogenase [Agrobacterium radiobacter
           K84]
          Length = 494

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPIMSAAMDTVTEGRLAIAMAQAGGLGVIH-RNLTPVQQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L DA+ ++       + VV++ Q+L GI+T  D+    +       + ++M   
Sbjct: 105 IGPDATLADALGLMKAHGISGIPVVEKSQRLVGILTNRDVRFASNP---EQKIHELMTHE 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + +      A +LL  H I  L+VVD   + IG++   D+
Sbjct: 162 NLITVADGVQQQEAKRLLHTHRIEKLLVVDGEGRLIGLITVKDI 205


>gi|85713182|ref|ZP_01044213.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Idiomarina baltica OS145]
 gi|85693006|gb|EAQ30973.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Idiomarina baltica OS145]
          Length = 612

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNP 293
              + +A   +SE     + VVD   +L GI+T+ DI  R   + L   ++V  VM   P
Sbjct: 164 DTTIQNAAQCMSENGISSILVVDSD-QLVGILTDRDIRNRVVAQGLGFNVTVAAVMTHLP 222

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +     L  A+  +  +N+  L VVD+  + +G++   DL++
Sbjct: 223 EFVFAHRSLLDALTTMTANNVHHLPVVDEQLRPVGMITATDLIK 266



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D     VEDV+ + P  +  DT +  A Q + ++ IS ++VVD  Q  +GI+   D+
Sbjct: 144 DWTEQRVEDVIQRAPISLASDTTIQNAAQCMSENGISSILVVDSDQ-LVGILTDRDI 199



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           V     L+DA+T ++      + VVDE  +  G+IT  D+ +
Sbjct: 210 FNVTVAAVMTHLPEFVFAHRSLLDALTTMTANNVHHLPVVDEQLRPVGMITATDLIK 266


>gi|50843228|ref|YP_056455.1| IMP dehydrogenase / GMP reductase [Propionibacterium acnes
           KPA171202]
 gi|50840830|gb|AAT83497.1| IMP dehydrogenase / GMP reductase [Propionibacterium acnes
           KPA171202]
 gi|314924254|gb|EFS88085.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL001PA1]
 gi|314964928|gb|EFT09027.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL082PA2]
 gi|314982155|gb|EFT26248.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL110PA3]
 gi|315090386|gb|EFT62362.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL110PA4]
 gi|315103891|gb|EFT75867.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL050PA2]
 gi|315106194|gb|EFT78170.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL030PA1]
 gi|327325591|gb|EGE67390.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL103PA1]
          Length = 504

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPICEVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|315056125|ref|XP_003177437.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
           118893]
 gi|311339283|gb|EFQ98485.1| meiotically up-regulated 70 protein [Arthroderma gypseum CBS
           118893]
          Length = 660

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 103 QIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIAEI 162

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 163 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 206



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 270 PPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPSTCSV 328

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 329 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 378


>gi|120553835|ref|YP_958186.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
 gi|120323684|gb|ABM17999.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
          Length = 638

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLN 281
            ++  +  +     P+  A+  + E   G + + D+ +   GI T  D+       K   
Sbjct: 176 RYALRNPIVCSPDLPVRKAVARMHENNVGSIIITDDNRHPTGIFTLRDLRTMIAEEKGPL 235

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  VM  NP  +        A  L+ +H+ + L VVD+  + IG+V   DL
Sbjct: 236 DTPIRQVMTGNPCRLPATADAFEAAMLMAEHHFAHLCVVDEEDRLIGVVSERDL 289



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +E   ++NP V   D  +  A+  + ++N+  +++ DD +   GI    DL
Sbjct: 171 DTPLERYALRNPIVCSPDLPVRKAVARMHENNVGSIIITDDNRHPTGIFTLRDL 224


>gi|19114942|ref|NP_594030.1| conserved protein (fungal and plant) [Schizosaccharomyces pombe
           972h-]
 gi|3183377|sp|O13965|MUG70_SCHPO RecName: Full=Meiotically up-regulated gene 70 protein
 gi|2330788|emb|CAB11262.1| conserved protein (fungal and plant) [Schizosaccharomyces pombe]
          Length = 730

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 12/142 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  K+       +    + D    V +   + +   +++ KR  CV VVD+ ++L GI+T
Sbjct: 52  PVRKIRRNGEPGTVDSAALDPALTVHMQSLVTETAQLMAAKRQNCVLVVDDDEQLAGIVT 111

Query: 269 EGDIF-RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD---- 321
             DI  R     LN     + D+M  +P  I  DT    A+ L+ +H    L VV     
Sbjct: 112 ATDIATRCVGAGLNARQTLIADIMSTSPLCITSDTRFDDALLLMIEHKFRHLPVVSDGGP 171

Query: 322 -----DCQKAIGIVHFLDLLRF 338
                D    IGI++    LR 
Sbjct: 172 DGSAGDEGDVIGIINMRACLRE 193



 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 4/116 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK 278
              ++ S +   LV     + +A   ++      V V+D    + G+ T  D+  R    
Sbjct: 257 IMSLIDSSEEPFLVGTRTTVAEATESMARSGVSAVLVMD-NGAVSGVFTAHDVVLRVLAA 315

Query: 279 DLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            L+    SV  VM  +P   L    ++ A++ + +   S L VVD+    IG++  
Sbjct: 316 GLDPYRSSVIRVMTPHPDCALASLRVSTALERMIEGKFSNLPVVDESDAIIGMLSL 371


>gi|325000823|ref|ZP_08121935.1| inosine-5'-monophosphate dehydrogenase [Pseudonocardia sp. P1]
          Length = 503

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 69/197 (35%), Gaps = 8/197 (4%)

Query: 142 IAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +T ++  ++   +D++        +         P  S+ M       +AIA+  +  
Sbjct: 15  IGLTFDDVLLLPAESDVIPSSADTSSQVTRRVRVQVPLVSSPMDTVTESRMAIAMARAGG 74

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
                   L P  +   + V                    L D   + ++ R   V V D
Sbjct: 75  LGVLH-RNLAPDAQAAQVEVVKRSEAGMVTDPVTCAPDATLSDVDALCAKFRISGVPVTD 133

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVL 317
           EG +L GIIT  D+      D     V +VM + P            A+ LLR+H +  L
Sbjct: 134 EGGRLVGIITNRDMRYEVDTD---RPVSEVMTRAPLVTAKVGVTAEAALGLLRRHKLEKL 190

Query: 318 MVVDDCQKAIGIVHFLD 334
            +VD      G++   D
Sbjct: 191 PIVDGDDVLRGLITIKD 207



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 270 GDIFRNFHKDLNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           G + RN   D     VE V      M+ +P     D  L+    L  +  IS + V D+ 
Sbjct: 76  GVLHRNLAPDAQAAQVEVVKRSEAGMVTDPVTCAPDATLSDVDALCAKFRISGVPVTDEG 135

Query: 324 QKAIGIVHFLDL 335
            + +GI+   D+
Sbjct: 136 GRLVGIITNRDM 147


>gi|309390263|gb|ADO78143.1| inosine-5'-monophosphate dehydrogenase [Halanaerobium praevalens
           DSM 2228]
          Length = 487

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 13/178 (7%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
               +   P  SA M       +AIA+            V+H    +         V  S
Sbjct: 35  TDDIYLNTPIISAGMDTVTEADMAIAMAREGGLG-----VIHKNMSIAAQAAEVDRVKRS 89

Query: 227 GDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              + +          + DA  ++S+     V +VD+ +KL GI+T  D+   F +D   
Sbjct: 90  ESGVIVDPFFLSPDALIEDAEALMSKYHISGVPIVDQDEKLLGILTNRDLR--FVED-YK 146

Query: 283 LSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V +VM +   V     T L  A + LR+H I  L +VD+     G++   D+ +  
Sbjct: 147 RPVAEVMTEEELVTAPVGTDLEGAKKQLRKHKIEKLPIVDENGILKGLITIKDIEKAK 204


>gi|299132334|ref|ZP_07025529.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
 gi|298592471|gb|EFI52671.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
          Length = 242

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 55/141 (39%), Gaps = 25/141 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                   +   V  G  L +A  ++ E R   + VVD+  KL GIITEGD  R      
Sbjct: 2   RAHQVMTRNPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVRRAEIGT 61

Query: 281 NT------------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            T                          V +VM   P  + E T L   ++L+ +HNI  
Sbjct: 62  QTRRARWLAFFVGPGRAATEFVHEQGRKVGEVMNAQPVTVTEQTSLEEIVRLMEKHNIKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV    + +GIV   DLLR
Sbjct: 122 LPVV-RGLQLLGIVTRTDLLR 141



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    VM +NP  + E T L  A  L+ ++ IS L VVD   K +GI+   D +R
Sbjct: 1   MRAHQVMTRNPITVTEGTSLREAALLMLENRISGLPVVDKFGKLVGIITEGDFVR 55



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  V     L + + ++ +     + VV  G +L GI+T  D+ R   +  +++  
Sbjct: 94  MNAQPVTVTEQTSLEEIVRLMEKHNIKRLPVV-RGLQLLGIVTRTDLLRTVASLDREVPD 152

Query: 283 LSVED 287
            + +D
Sbjct: 153 PTADD 157


>gi|168700189|ref|ZP_02732466.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
          Length = 171

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 49/131 (37%), Gaps = 3/131 (2%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P G +    +     +        V  G  L DA+  + + R G V V   G +L GI+T
Sbjct: 33  PNGPVEASLMREPVSVLDPRPPITVDAGATLGDAVRRMIDGRTGAVLVTGPGGELVGILT 92

Query: 269 EGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           E D               V + M   P+ +     L  A+  +       L VV +  + 
Sbjct: 93  ERDFLTKVAGAPGFEARPVREFMTLAPETVTPTDTLAFALGKMDAGAYRHLPVV-EGGRP 151

Query: 327 IGIVHFLDLLR 337
           +G++   DLLR
Sbjct: 152 VGVISVRDLLR 162



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 47/136 (34%), Gaps = 13/136 (9%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLA--PTTSAIMQLAIGDALAIALLESRNFS 200
           ++  E  SV+     I +            +    T + ++    G+ + I        +
Sbjct: 40  SLMREPVSVLDPRPPITVDAGATLGDAVRRMIDGRTGAVLVTGPGGELVGI-------LT 92

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           E DF +    G  G       + M    +   V     L  A+  +    +  + VV EG
Sbjct: 93  ERDF-LTKVAGAPGFEARPVREFM--TLAPETVTPTDTLAFALGKMDAGAYRHLPVV-EG 148

Query: 261 QKLKGIITEGDIFRNF 276
            +  G+I+  D+ R+ 
Sbjct: 149 GRPVGVISVRDLLRHV 164


>gi|242310616|ref|ZP_04809771.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT
           98-5489]
 gi|239523014|gb|EEQ62880.1| inositol-5-monophosphate dehydrogenase [Helicobacter pullorum MIT
           98-5489]
          Length = 483

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            +P  SA M        AIA+            ++H    + +       V  S   + +
Sbjct: 40  NSPLVSAAMDTVTEYRTAIAMARVGGIG-----IIHKNMDINSQVAQIKKVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L+ A  I    +   V VVD+   L GI+T  D+   F  DLN L V++V
Sbjct: 95  DPIFISPEATLMQAKAITDNYKISGVPVVDDSGSLIGILTNRDMR--FETDLNRL-VKEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P       T L  A  ++ +H I  L +V++     G++   D+ +
Sbjct: 152 MTKAPLITAQVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQK 201



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 29/64 (45%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   +   ++G  L +A  I+++ +   + +V+E   LKG+IT  DI 
Sbjct: 141 ETDLNRLVKEVMTKAPLITAQVGTSLEEARNIMNKHKIEKLPIVNEKGILKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|172040445|ref|YP_001800159.1| hypothetical protein cur_0765 [Corynebacterium urealyticum DSM
           7109]
 gi|171851749|emb|CAQ04725.1| hypothetical protein cu0765 [Corynebacterium urealyticum DSM 7109]
          Length = 620

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
              L DA   + E     + V+D+ ++L+GIIT+ D+ R+   +++    V + M  NP 
Sbjct: 171 QTTLRDAAIRMGEFNVSSLLVIDD-RELRGIITDRDMRRSVAAEISGDSPVSEAMTANPI 229

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  D L+  AM L+ +  I  + VVDD  +  GI+   D++R 
Sbjct: 230 SLGPDALVFEAMLLMAERGIHHIPVVDD-GRVAGIIAAADIMRL 272



 Score = 42.6 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + +A+ +++E+    + VVD+  ++ GII   DI R    D
Sbjct: 233 PDALVFEAMLLMAERGIHHIPVVDD-GRVAGIIAAADIMRLMQSD 276



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             N   ++    +    I +P      T L  A   + + N+S L+V+DD ++  GI+  
Sbjct: 145 RSNTSSEVLRTPLGAFAITDPAATSSQTTLRDAAIRMGEFNVSSLLVIDD-RELRGIITD 203

Query: 333 LDLLR 337
            D+ R
Sbjct: 204 RDMRR 208


>gi|147839911|emb|CAN65905.1| hypothetical protein VITISV_004872 [Vitis vinifera]
          Length = 298

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D M   + + +VK   P+ +A+  L EK+     V+DE  KL G++++ D+ 
Sbjct: 133 RNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDEDWKLVGLVSDYDLL 192

Query: 274 -----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                                        +          V DVM   P V+ E T L  
Sbjct: 193 ALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPVVVHETTNLED 252

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A +LL +     L VVD   K +GIV    ++R  +
Sbjct: 253 AARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAAL 288



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              +   KL               +  +V     L DA  +L E ++  + VVD   KL 
Sbjct: 216 KAFNQIQKLLAKTKGKVVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLV 275

Query: 265 GIITEGDIFRNFHK 278
           GI+T G + R   K
Sbjct: 276 GIVTRGSVVRAALK 289


>gi|148255020|ref|YP_001239605.1| inosine 5'-monophosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
 gi|146407193|gb|ABQ35699.1| inosine-5'-monophosphate dehydrogenase [Bradyrhizobium sp. BTAi1]
          Length = 495

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 43  NIPIMASAMDTVTEARMAIAMAQAGGIGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 101

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++ +  F  + VV  G K     L GI+T  D+            + +
Sbjct: 102 IAPDATLADALALMKDYGFSGIPVVTGGGKGIPGKLVGILTNRDVRFATDP---RQKISE 158

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVDD  + +G++   D+ + 
Sbjct: 159 LMTHENLVTVREGVGQDEAKKILHKHRIEKLLVVDDQYRCVGLITVKDMEKA 210


>gi|312880097|ref|ZP_07739897.1| inosine-5'-monophosphate dehydrogenase [Aminomonas paucivorans DSM
           12260]
 gi|310783388|gb|EFQ23786.1| inosine-5'-monophosphate dehydrogenase [Aminomonas paucivorans DSM
           12260]
          Length = 491

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 59/172 (34%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            +LH    +         V  S   + +
Sbjct: 45  NIPICSAAMDTVTEGRLAIAMAREGGIG-----ILHRNLPIERQAAEVDKVKRSESGVIV 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++       V +VDE  +L GIIT  D+            +  V
Sbjct: 100 DPFFLHPEDQVQDAVNLMEHYHISGVPIVDERVRLVGIITNRDLRFVTD---YQQPISAV 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M + N       T L  A  +L  H +  L +VD   K  G++   D+ +  
Sbjct: 157 MTRDNLITASLGTTLEDAKNILMHHKVEKLPIVDPEGKLKGLITIKDIQKAK 208


>gi|221633100|ref|YP_002522325.1| CBS domain-containing protein [Thermomicrobium roseum DSM 5159]
 gi|221156404|gb|ACM05531.1| CBS domain protein [Thermomicrobium roseum DSM 5159]
          Length = 635

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 208 HPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            PGG    +       V        L      + +A   +S +R   + VVDE     GI
Sbjct: 151 EPGGDGAFMLSAPCRTVARQPLLTCL--PDITVREAAQRMSVERVNSIVVVDEQGSGLGI 208

Query: 267 ITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+  R      +    V +VM      I  D LL  A++LL    I+ L VV +  
Sbjct: 209 LTDWDLRERVIAAGRSLDTPVHEVMSSPLVTIDADRLLLEAVRLLIARRINHL-VVTEEG 267

Query: 325 KAIGIVHFLDLL 336
           K  G++   DLL
Sbjct: 268 KPFGMLTAFDLL 279


>gi|308274798|emb|CBX31397.1| Inosine-5'-monophosphate dehydrogenase [uncultured Desulfobacterium
           sp.]
          Length = 501

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI++             +H    +    +    V  S   + +
Sbjct: 56  NIPIVSAAMDTVTESQTAISMAREGGIG-----FIHRNMSIKNQAIEVDKVKKSESGMIV 110

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + + + ++ E R   V V  +G KL GI+T  D+   F  +L+   V DV
Sbjct: 111 DPITINPDHKVREVVKLMEEYRISGVPVT-KGDKLVGIVTNRDLR--FETNLDK-KVCDV 166

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N   + E   L  + +LL +H I  L+VVD   + +G++   D+ +  
Sbjct: 167 MTKDNLVTVSEGISLEDSKKLLHEHRIEKLLVVDKKGRLVGMITIKDIEKIK 218


>gi|78042653|ref|YP_360021.1| inosine-5'-monophosphate dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77994768|gb|ABB13667.1| inosine-5'-monophosphate dehydrogenase [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 483

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +    +    V  S   I  
Sbjct: 42  NIPIVSAGMDTVTEARMAIAMAREGGIG-----VIHKNMSIEEQAMEVDKVKRSEHGIIA 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+       V +  E  KL GIIT  D+   F  D +   + DV
Sbjct: 97  DPISLSPEHLIRDALEIMERYHISGVPITVE-GKLVGIITNRDLR--FESDYSK-KIADV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 153 MTKDNLITAPVGTSLKEAEKILQKHKIEKLPLVDENFHLKGLITIKDI 200


>gi|315093772|gb|EFT65748.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           HL060PA1]
          Length = 504

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPICEVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|224103629|ref|XP_002313129.1| predicted protein [Populus trichocarpa]
 gi|222849537|gb|EEE87084.1| predicted protein [Populus trichocarpa]
          Length = 163

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 62/153 (40%), Gaps = 32/153 (20%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
                D M   + + + K    + +A+  L EKR     V+D+  KL G++++ D+    
Sbjct: 1   IHTVGDFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLG 60

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +   K+ N   V D+M  NP V+ E T L  A
Sbjct: 61  SISGSSCQNDTNLFPNVDSSWKTFNELQKLLIKN-NGKVVGDLMTPNPLVVYETTNLEDA 119

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++LL +     L VVD+  K +GI+   D++R 
Sbjct: 120 VRLLLETKYRRLPVVDNDGKLVGIITRGDIVRA 152



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 284 SVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +V D M K  +  V   +T +  A++ L +  I+   V+DD  K +G+V   DLL  G I
Sbjct: 3   TVGDFMTKREDLHVFKANTTVDEALEALVEKRITGFPVIDDNWKLVGVVSDYDLLVLGSI 62


>gi|282855112|ref|ZP_06264444.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           J139]
 gi|282581700|gb|EFB87085.1| inosine-5'-monophosphate dehydrogenase [Propionibacterium acnes
           J139]
          Length = 504

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 51/211 (24%), Positives = 73/211 (34%), Gaps = 26/211 (12%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAI 191
           T E  + +A   D VL  P E    P  +              P  SA M       +A+
Sbjct: 9   TIEELAPLALTFDDVLLQPVESNVIPSQVKTTTRVSRNISIAIPLVSAAMDTVTETRMAV 68

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILS 247
           A+            +LH    +         V  S     D    +     L DA  +  
Sbjct: 69  AMAREGGLG-----ILHRNLSIEDQAAMVDQVKRSEAGMIDEPITISPNATLADAEELCH 123

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAM 306
             R   V VVD+ + L GIIT  D+     +D     + +VM   P V     T  + A+
Sbjct: 124 TYRISGVPVVDDKENLVGIITNRDMRF---EDNPQRPICEVMTAAPLVTAPVGTSPSDAL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            LL  H I  L +VD   K  G+    D ++
Sbjct: 181 SLLAAHKIEKLPLVDADGKLRGLFTLKDFVK 211


>gi|159041685|ref|YP_001540937.1| signal transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920520|gb|ABW01947.1| putative signal transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 295

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 34/122 (27%), Positives = 61/122 (50%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 +      + +VK   PL     ++++++   + VV++  +L G+IT  D+ R F
Sbjct: 169 IPKIRVLDVMTKELAVVKHDEPLTSVAKLIADRKIRALPVVNDNGELIGLITSSDLARAF 228

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                T  V+D M     +I  D  +  AM+L+  +NI  L+V++  QK +GIV   D+L
Sbjct: 229 SDGALTALVKDYMRHEVPIISWDRDIYDAMRLMMSYNIGRLIVINQEQKPVGIVTRTDIL 288

Query: 337 RF 338
           R+
Sbjct: 289 RY 290



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +P++     + DA+ ++     G + V+++ QK  GI+T  DI R   
Sbjct: 240 YMRHEVPIISWDRDIYDAMRLMMSYNIGRLIVINQEQKPVGIVTRTDILRYLA 292


>gi|300779759|ref|ZP_07089615.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium genitalium
           ATCC 33030]
 gi|300533869|gb|EFK54928.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium genitalium
           ATCC 33030]
          Length = 510

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 46/209 (22%), Positives = 73/209 (34%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I L  +T ++  ++   + IV   +    +         P  SA M       +AIA+
Sbjct: 17  NKIALRGLTFDDVLLLPAESHIVPGEVDTSAQFSRNIRLGIPVASAAMDTVTESRMAIAM 76

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEK 249
                       VLH              V  S   +            + D   + +  
Sbjct: 77  ARQGGIG-----VLHRNLSAEDQAEHVDVVKRSESGMVTDPVTASPDMTIADVDALCARF 131

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQL 308
           R   + VVD    L GIIT  D+   F  D +   V  VM   P V+ ED      A++L
Sbjct: 132 RISGLPVVDGDGVLVGIITNRDMR--FEPDFSR-PVAQVMTPMPLVVAEDGVSKEEALKL 188

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + +  L +VD   K  G++   D ++
Sbjct: 189 LSANKVEKLPIVDKQGKLTGLITVKDFVK 217


>gi|86158771|ref|YP_465556.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85775282|gb|ABC82119.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 487

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 22/207 (10%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCP-------------HGLAPTTSAIMQLAIGDALA 190
           + + +   +A   D VL LP E +  P                 P  S+ M       +A
Sbjct: 1   MLNRDDLRLALTFDDVLLLPAESDVLPKSVETSTRLTRNIQVNIPIVSSAMDTVTEARMA 60

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           IA+       F   +  V     ++  +    S V+        V+   PL  A+ ++ E
Sbjct: 61  IAMAAVGGLGFIHKNLTVEDQAAEVVKVKKYESAVV---TEPITVEPDAPLHRAVALMRE 117

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                + VV +G +L GI+T  D+   F K+L    VE VM K+     E   +  A +L
Sbjct: 118 NGISGIPVV-QGGRLLGILTNRDLR--FEKNL-EQRVEQVMTKDLVTAHEGVTIEQAKEL 173

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L +H I  L+VV++  +  G++   D+
Sbjct: 174 LHRHRIEKLLVVNERYELRGLITIKDI 200


>gi|268323738|emb|CBH37326.1| conserved hypothetical protein, CBS domain containing [uncultured
           archaeon]
          Length = 396

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLS 284
                 +    P IDAI  L++       +VD+  +L GI T+ DI +   K   L    
Sbjct: 68  MFKPHCIHKDTPCIDAICALTDSGQRAAPIVDDNGELVGITTDYDIMKEGSKSQILKDTK 127

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V  VM ++P  + +   +  A  ++R++NI  ++VVD+ +  +GIV   D+L+
Sbjct: 128 VTKVMTRSPAYVEQGESIGKARSIIRKNNIGRVLVVDENEDLVGIVTGGDILK 180



 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+ ++  G K   L       + +      V+ G  +  A +I+ +   G V VVDE + 
Sbjct: 110 DYDIMKEGSKSQILKDTKVTKVMTRSPAY-VEQGESIGKARSIIRKNNIGRVLVVDENED 168

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDV---------------MIKNPKVILEDTLLTVAMQ 307
           L GI+T GDI +  +K    ++V +V               M         D  L     
Sbjct: 169 LVGIVTGGDILKRIYKPKRKMTVGEVKGENVPRMGQSVSFIMSSPVISADIDANLADVAN 228

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L++ H+I  + +V       GIV   D++
Sbjct: 229 LMQTHDIRSVPIV-KDGVLRGIVTIPDIM 256



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 8/118 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLN 281
           +  S   +  +     +   I I+ + +F  + V+D     +  I+   D+    + D  
Sbjct: 7   IEASTREVVTIMPDTSIAKTIAIMEKNKFHNLVVLDIAEIYMVNIL---DLLIASNPDSY 63

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              V++ M K P  I +DT    A+  L         +VDD  + +GI    D+++ G
Sbjct: 64  ---VDEFMFK-PHCIHKDTPCIDAICALTDSGQRAAPIVDDNGELVGITTDYDIMKEG 117



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + +   +    I+ DT +   + ++ ++    L+V+D  +    +V+ LDLL
Sbjct: 1   MFDEPIIEASTREVVTIMPDTSIAKTIAIMEKNKFHNLVVLDIAEIY--MVNILDLL 55


>gi|15922120|ref|NP_377789.1| hypothetical protein ST1806 [Sulfolobus tokodaii str. 7]
 gi|15622908|dbj|BAB66898.1| 143aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 143

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 3/115 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSV 285
              I  V+ G    DA+ I++++  G + + D G KL GI TE D+ R   +D +    V
Sbjct: 11  NKPIIKVQKGTSARDAVRIMAKENVGSILIFD-GDKLIGIFTERDLLRAVARDEDLNKPV 69

Query: 286 EDV-MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           E++   KN   I ED+ + VA +L+ +H I  L+VV+   K IG+V   D++   
Sbjct: 70  EELGTTKNLITIDEDSPINVAAELMSKHCIRHLIVVNKSGKPIGVVSIRDIIGEK 124



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 10/59 (16%)

Query: 289 MIKN--------PKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  N        P + + + T    A++++ + N+  +++ D   K IGI    DLLR 
Sbjct: 1   MTPNKIKLLINKPIIKVQKGTSARDAVRIMAKENVGSILIFDGD-KLIGIFTERDLLRA 58


>gi|296179471|gb|ADG96477.1| inosine-5-monophosphate dehydrogenase [Gordonia cholesterolivorans]
          Length = 503

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 44/199 (22%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAI--------MQLAIGDALAIALLESRNFSEND 203
           +    D VL LP   +  P+ +  ++           +  +  D +  A +         
Sbjct: 17  LGLTFDDVLLLPAASDVVPNAVDTSSRLTREITLRVPLVSSAMDTVTEARMAIAMARAGG 76

Query: 204 FYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             VLH    +         V  S      +         L +   + +  R   + VVD 
Sbjct: 77  MGVLHRNLSIEAQAAAVETVKRSEAGMVTNPVTCLPTNTLAEVDAMCARYRISGLPVVDA 136

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLM 318
              L GIIT  D+   F  D  T  V +VM   P     E      A+ LLR+H I  L 
Sbjct: 137 SGDLVGIITNRDMR--FEAD-ETRPVSEVMTPAPLITASEGVSAEAALGLLRRHKIEKLP 193

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           +VD   K  G++   D ++
Sbjct: 194 IVDGNGKLTGLITVKDFVK 212


>gi|18976657|ref|NP_578014.1| inositol-5-monophosphate dehydrogenase [Pyrococcus furiosus DSM
           3638]
 gi|1170554|sp|P42851|IMDH_PYRFU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|595287|gb|AAC44532.1| IMP dehydrogenase [Pyrococcus furiosus]
 gi|18892229|gb|AAL80409.1| inosine-5'-monophosphate dehydrogenase (imp dehydrogenase)
           [Pyrococcus furiosus DSM 3638]
          Length = 485

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEQVKRVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ ++ +     + VV+E  ++ GIIT+ DI     +     +V+++
Sbjct: 102 DVITIAPDETIDYALFLMEKHGIDGLPVVEED-RVVGIITKKDIAAREGR-----TVKEL 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +    + E   +  A++++ ++ I  L VV++  K +G++   DL+
Sbjct: 156 MTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLV 203


>gi|194018070|ref|ZP_03056675.1| inosine-5'-monophosphate dehydrogenase [Bacillus pumilus ATCC 7061]
 gi|194010262|gb|EDW19839.1| inosine-5'-monophosphate dehydrogenase [Bacillus pumilus ATCC 7061]
          Length = 488

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E  S      P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVELTSTLKLNIPIISAGMDTVTESQMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPEHQVFDAEHLMGKYRISGVPIVNNIEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L+Q+ I  L ++DD     G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLEEAEKILQQYKIEKLPLLDDEGTLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|70991156|ref|XP_750427.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
 gi|66848059|gb|EAL88389.1| CBS and PB1 domain protein [Aspergillus fumigatus Af293]
 gi|159130901|gb|EDP56014.1| CBS and PB1 domain protein [Aspergillus fumigatus A1163]
          Length = 661

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+        +    ++V ++
Sbjct: 112 QIKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 172 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 217



 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA T++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 279 PPTTVSVRTSVRDAATLMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPATCSV 337

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 338 VRVMTPHPDFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMV---DVLKL 387



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 40/248 (16%), Positives = 78/248 (31%), Gaps = 55/248 (22%)

Query: 135 RRFSIPLIAITSE--NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +R   P    T +    +V+A      L +       P+      + +M     D + + 
Sbjct: 84  KRHHAPRAHRTRKAPPGTVLALKPSQALQI------KPNTTVAEAAQMMAAKREDCVLVT 137

Query: 193 LLESRN---FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
             + R    F+  D      G       +  +++M         +      DA+ ++  K
Sbjct: 138 DDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEIMTKNPLCA--RTDTSATDALDLMVRK 195

Query: 250 RFGCVAVVDEGQKLKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV 288
            F  + V+DE Q + GI  IT+                    D       +L +   + +
Sbjct: 196 GFRHLPVMDENQDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQTELGSTQPQQI 255

Query: 289 ----------MI----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                     M             P  +   T +  A  L+++H+ + L+V D      G
Sbjct: 256 IQYVEALRSKMSGPTLESVLDGLPPTTVSVRTSVRDAATLMKEHHTTALLVQD-QGSITG 314

Query: 329 IVHFLDLL 336
           I    D++
Sbjct: 315 IFTSKDIV 322


>gi|320354364|ref|YP_004195703.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122866|gb|ADW18412.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 218

 Score = 96.9 bits (240), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           H   S   V     + +AI IL       + VVDE   L+GI+++ D+            
Sbjct: 6   HMTPSPVTVTPEQTVAEAIDILQRYNIRHLPVVDEQGVLQGILSDRDLRSARPSTVAQSK 65

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 + +N   V  +M ++   ++    L  A+ L +   I  L VV++ +K +G+  
Sbjct: 66  ERGTVEEKVNKTPVSVLMTRDCLFLVPHATLDDALLLFQSRKIGALPVVNEEEKVVGVFT 125

Query: 332 FLDLLRF 338
             DL+  
Sbjct: 126 TADLMNA 132



 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + D M  +P  +  +  +  A+ +L+++NI  L VVD+     GI+   DL
Sbjct: 3   IHDHMTPSPVTVTPEQTVAEAIDILQRYNIRHLPVVDEQGVLQGILSDRDL 53



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 7/122 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+   +        G +          +        +     L DA+ +   ++ G + V
Sbjct: 54  RSARPSTVAQSKERGTVEEKVNKTPVSVLMTRDCLFLVPHATLDDALLLFQSRKIGALPV 113

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL---LTVAMQLLRQHN 313
           V+E +K+ G+ T  D+   + +DL  L  +  +      I ++     L+  ++++ +  
Sbjct: 114 VNEEEKVVGVFTTADLMNAY-RDLFGLGAKGSV---LVSIEDNQDPQALSKLVRIMEEKQ 169

Query: 314 IS 315
           + 
Sbjct: 170 VQ 171


>gi|154278497|ref|XP_001540062.1| predicted protein [Ajellomyces capsulatus NAm1]
 gi|150413647|gb|EDN09030.1| predicted protein [Ajellomyces capsulatus NAm1]
          Length = 403

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 108 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIRARDVTIAEI 167

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 168 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 211



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSV 285
               V +   + +A T++ E     + V D    + GI T  D+  R      D NT SV
Sbjct: 275 PPTTVSVRTSVREAATLMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPNTCSV 333

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 334 IRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 383


>gi|149188400|ref|ZP_01866693.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
 gi|148837618|gb|EDL54562.1| hypothetical protein VSAK1_20434 [Vibrio shilonii AK1]
          Length = 635

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 52/110 (47%), Gaps = 3/110 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVED 287
           I +V     + D    +   +    AVV +  KL G++T+ D+ +        N+  + D
Sbjct: 179 IAIVDASMSIKDVAHEMRVVKRSSTAVVCDNGKLVGLMTDRDMTKRVIAEGHDNSAPIRD 238

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  NP  +  + L+  A  L+ QHN+  L VV +  + +G++    L++
Sbjct: 239 VMTPNPLTVSPNDLVLHAASLMMQHNVRGLPVVSE-GRVVGLLTTSHLVQ 287


>gi|117920024|ref|YP_869216.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
 gi|117612356|gb|ABK47810.1| cyclic nucleotide-binding protein [Shewanella sp. ANA-3]
          Length = 620

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              S  ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSSPIMIDAHASVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGRI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+      KAIG+V   D+LR
Sbjct: 215 AVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTEEVKAIGMVTSTDILR 272



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P +I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSSPIMIDAHASVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL----LRFGI 340
            DL    L  G+
Sbjct: 199 KDLRNRVLAAGL 210



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 24/60 (40%), Gaps = 4/60 (6%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++DE      K  G++T  DI R
Sbjct: 213 RIAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTEEVKAIGMVTSTDILR 272


>gi|113475129|ref|YP_721190.1| polynucleotide adenylyltransferase region [Trichodesmium erythraeum
           IMS101]
 gi|110166177|gb|ABG50717.1| Polynucleotide adenylyltransferase region [Trichodesmium erythraeum
           IMS101]
          Length = 909

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  IL       ++VVD   KL GII+  DI    H   +   V
Sbjct: 325 MSSPVRTIPPETSIEEAHRILLRYNHSGLSVVDSSGKLVGIISRRDIDIALHHGFSHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M    K I  +T L    +L+  ++I  L V+ +    +GIV   D+LR 
Sbjct: 385 KGYMTPQLKTISPETNLPEIERLMVTYDIGRLPVL-ENNSLVGIVTRTDVLRE 436



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 29/52 (55%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +D+M    + I  +T +  A ++L ++N S L VVD   K +GI+   D+
Sbjct: 320 TAKDLMSSPVRTIPPETSIEEAHRILLRYNHSGLSVVDSSGKLVGIISRRDI 371



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L +   ++     G + V+ E   L GI+T  D
Sbjct: 374 ALHHGFSHAPVKGYMTPQLKTISPETNLPEIERLMVTYDIGRLPVL-ENNSLVGIVTRTD 432

Query: 272 IFRNFH 277
           + R  H
Sbjct: 433 VLRELH 438


>gi|319655037|ref|ZP_08009107.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317393261|gb|EFV74029.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 487

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 43/181 (23%), Positives = 68/181 (37%), Gaps = 15/181 (8%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           L            P  SA M       +AIA+            V+H    +        
Sbjct: 32  LKVNLTEKIALNIPVISAGMDTVTEAEMAIAMARQGGLG-----VIHKNMSIEQQADQVD 86

Query: 222 DVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRN 275
            V  S   +            + DA  ++ + R   V +V+  +  KL GI+T  D+   
Sbjct: 87  KVKRSESGVITDPFFLTPEQQVFDAEHLMGKYRISGVPIVNNNEEQKLVGILTNRDLR-- 144

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D  ++ + DVM K N       T L  A ++L+QH I  L +VDD     G++   D
Sbjct: 145 FIQD-YSIKISDVMTKENLVTAPVGTTLDEAEKILQQHKIEKLPLVDDEGVLKGLITIKD 203

Query: 335 L 335
           +
Sbjct: 204 I 204


>gi|119496427|ref|XP_001264987.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
 gi|119413149|gb|EAW23090.1| CBS and PB1 domain protein [Neosartorya fischeri NRRL 181]
          Length = 661

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+        +    ++V ++
Sbjct: 112 QIKPNTTVAEAAQMMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 172 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 215



 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T S
Sbjct: 278 MPPTTVSVRTSVRDAAALMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPATCS 336

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 337 VVRVMTPHPDFAPADMSIQAALRKMHDGHYLNLPVMNETGEIVGMV---DVLKL 387



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 42/253 (16%), Positives = 80/253 (31%), Gaps = 65/253 (25%)

Query: 135 RRFSIPLIAITSE--NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +R   P    T +    +V+A      L +       P+      + +M     D + + 
Sbjct: 84  KRHQAPRAHRTRKAPPGTVLALKPSQALQI------KPNTTVAEAAQMMAAKREDCVLVT 137

Query: 193 LLESRN---FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
             + R    F+  D      G       +  +++M         +      DA+ ++  K
Sbjct: 138 DDDDRIAGIFTAKDLAFRVVGNGQKAREITVAEIMTKNPLCA--RTDTSATDALDLMVRK 195

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-------------------------- 283
            F  + V+DE Q + GI+   DI + F+  +  L                          
Sbjct: 196 GFRHLPVMDENQDISGIL---DITKCFYDAMEKLERAYSSSRKLYDALEGVQTELGSTQP 252

Query: 284 --------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                               +V D M   P  +   T +  A  L+++H+ + L+V D  
Sbjct: 253 QQIIQYVEALRSKMSGPTLETVLDGM--PPTTVSVRTSVRDAAALMKEHHTTALLVQD-Q 309

Query: 324 QKAIGIVHFLDLL 336
               GI    D++
Sbjct: 310 GSITGIFTSKDIV 322


>gi|325282685|ref|YP_004255226.1| inosine-5'-monophosphate dehydrogenase [Deinococcus proteolyticus
           MRP]
 gi|324314494|gb|ADY25609.1| inosine-5'-monophosphate dehydrogenase [Deinococcus proteolyticus
           MRP]
          Length = 502

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 45/203 (22%), Positives = 78/203 (38%), Gaps = 16/203 (7%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            IT ++  +   H+ ++   + +  +         P  SA M       +A+AL      
Sbjct: 26  GITFDDVLLTPRHSQVLPSDVDISAQLTRRIRLNIPFISAAMDTVTETQMAVALAREGGI 85

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 V+H    +         V  S          +     + DA  ++ E +   V 
Sbjct: 86  G-----VIHKNMPVDVQAEMVRKVKRSESGMITDPITLPATATVADADRLMGEYKISGVP 140

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNI 314
           + D   +L+GIIT  D+   F  DLNT  ++DVM K     +   T L  A ++ + H I
Sbjct: 141 ITDAAGRLQGIITNRDMR--FVDDLNT-PIQDVMTKEELITVPVGTTLEQAREIFKGHRI 197

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L+V D+     G++   DL +
Sbjct: 198 EKLLVTDEEGHLRGLITIKDLTK 220


>gi|320580871|gb|EFW95093.1| hypothetical protein HPODL_3465 [Pichia angusta DL-1]
          Length = 624

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
                 + K    + +A  ++S  +  CV VVDE   L GI T  D+  R    +LN   
Sbjct: 81  KPSEAVICKPTNTVYEAAQLMSVTKENCVLVVDEDGLLSGIFTAKDLAFRIVGANLNANQ 140

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++ +M  NP      TL + A+ L+       L VV++  + +G++   D+ +
Sbjct: 141 TTIDQIMTPNPMCAKVSTLASDALSLMVNKGFRHLPVVNEGNQIVGVL---DITK 192



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 9/127 (7%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDI-FR 274
              + V+          I   + +A  ++ + +   V V D     ++ GI T  DI  R
Sbjct: 245 PTLNSVLSERTIPVCCDIKTTVYEAAILMRDNKTTAVLVKDSKNNDEVTGIFTSKDIVLR 304

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVH 331
                 D  T SV  VM   P   L  + +  A++ + +     L VVDD   + +G+V 
Sbjct: 305 VIAAGIDPRTCSVIRVMTPKPSYALASSSIHQALRQMFEGRYLNLPVVDDDNSEIVGVV- 363

Query: 332 FLDLLRF 338
             D+L+ 
Sbjct: 364 --DVLKL 368



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 59/186 (31%), Gaps = 53/186 (28%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L         +M        V       DA++++  K F  + VV+
Sbjct: 122 FTAKDLAFRIVGANLNANQTTIDQIMTPNPMCAKVS--TLASDALSLMVNKGFRHLPVVN 179

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL--------SVEDVM--------IKN---------- 292
           EG ++ G++   DI + +++ +  L         + D M          N          
Sbjct: 180 EGNQIVGVL---DITKCYNEAMTKLERMYESSKRLYDAMEGVTEELGTANQPVHVIKYFE 236

Query: 293 --------------------PKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIV 330
                               P      T +  A  L+R +  + ++V D  +  +  GI 
Sbjct: 237 NLRNLVSGPTLNSVLSERTIPVCCDIKTTVYEAAILMRDNKTTAVLVKDSKNNDEVTGIF 296

Query: 331 HFLDLL 336
              D++
Sbjct: 297 TSKDIV 302


>gi|269218898|ref|ZP_06162752.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           848 str. F0332]
 gi|269212009|gb|EEZ78349.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           848 str. F0332]
          Length = 500

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 19/209 (9%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAI 191
           T +    V    D VL LP+E +  P                 P  SA M       +AI
Sbjct: 3   TRDPFEFVGLTYDDVLLLPRETDVIPSEVDTASRLTRKLSLKTPLVSAAMDTVTESRMAI 62

Query: 192 ALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A+           +  V+    ++  +    S ++H       +     + +   + ++ 
Sbjct: 63  AMARQGGIGIIHRNLSVVAQAEQVRQVKRSESGMVH---DPATIGPEATIAELDALCAKY 119

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   + VVD   KL GIIT  D+      +    +V + M   P      D     A +L
Sbjct: 120 RISGLPVVDGDDKLLGIITNRDLRFIPESEFAVRTVRETMTPMPLVTAGRDVPQEEAARL 179

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L QH I  L ++D   +  G++   D ++
Sbjct: 180 LAQHKIEKLPLIDGEGRLTGLITVKDFVK 208


>gi|117924350|ref|YP_864967.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1]
 gi|117608106|gb|ABK43561.1| cyclic nucleotide-binding protein [Magnetococcus sp. MC-1]
          Length = 624

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMIKN 292
               + +A   ++E +   + +VDE ++L GIIT+ D+  R     L+T   V D+M  N
Sbjct: 170 AHMSIREAAAKMTEIQVSSLLIVDEQEQLIGIITDRDLRKRVIVAGLDTARPVADIMTAN 229

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P  I     ++ A  ++ + +I  + V     K +G++   DL+R
Sbjct: 230 PSTIESAASVSEAQLMMMRTHIHHIPVT-KAGKLVGMITNTDLVR 273



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 32/59 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++EDVM ++P        +  A   + +  +S L++VD+ ++ IGI+   DL +  I+
Sbjct: 155 QAIEDVMARSPITGTAHMSIREAAAKMTEIQVSSLLIVDEQEQLIGIITDRDLRKRVIV 213



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +   ++    + +A  ++       + V  +  KL G+IT  D+ RN
Sbjct: 226 MTANPSTIESAASVSEAQLMMMRTHIHHIPVT-KAGKLVGMITNTDLVRN 274


>gi|326480461|gb|EGE04471.1| CBS and PB1 domain-containing protein [Trichophyton equinum CBS
           127.97]
          Length = 696

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 145 QIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAYRVVGAGIRARDVTIVEI 204

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+   D+ +
Sbjct: 205 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGIL---DITK 250



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 312 PPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 370

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 371 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 420



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 37/235 (15%), Positives = 73/235 (31%), Gaps = 53/235 (22%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSEN 202
               +V+A      L +       P+      + +M     D + +   + R    F+  
Sbjct: 130 GPPGTVLALKPSQALQI------KPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAK 183

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D      G  +    V   ++M         +      DA+ ++  K F  + V+DE Q 
Sbjct: 184 DLAYRVVGAGIRARDVTIVEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMDENQD 241

Query: 263 LKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV----------MI- 290
           + GI  IT+                    D       +L +   + +          M  
Sbjct: 242 ISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQSELGSSQPQQIIQYVEALRSKMSG 301

Query: 291 ---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                      P  +   T +  A  L+++++ + L+V D      GI    D++
Sbjct: 302 PTLESVLNGLPPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVV 355


>gi|220916721|ref|YP_002492025.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219954575|gb|ACL64959.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-1]
          Length = 487

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 22/207 (10%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALA 190
           + + +   +A   D VL LP E +  P                 P  S+ M       +A
Sbjct: 1   MLNRDDLRLALTFDDVLLLPAESDVLPKSVETSTRLTRNIQLNIPIVSSAMDTVTEARMA 60

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           IA+       F   +  V     ++  +    S V+        V+   PL  A+ ++ E
Sbjct: 61  IAMAAVGGLGFIHKNLTVEDQAAEVVKVKKYESAVV---TEPITVEPDAPLHRAVALMRE 117

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                + VV +G +L GI+T  D+   F K+L    VE VM K+     E   +  A +L
Sbjct: 118 NGISGIPVV-QGGRLLGILTNRDLR--FEKNL-EQRVEQVMTKDLVTAHEGVTIEQAKEL 173

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L +H I  L+VV++  +  G+V   D+
Sbjct: 174 LHRHRIEKLLVVNERYELRGLVTIKDI 200


>gi|303244832|ref|ZP_07331160.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484782|gb|EFL47718.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 133

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   + D I ++ E     V V D+     GIIT+ DI +++ ++L+ L  ED+MI  
Sbjct: 18  VSLKDKVSDVIKLMGENNISSVVVSDDNNVYWGIITDIDILKHYTENLDELKAEDIMISK 77

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRF 338
              I     L  A  L+ ++NI  L VV +    K IG++   D+++ 
Sbjct: 78  LITISPTAPLEKAAALMAENNIHHLYVVSELREDKIIGVLSSKDIVKL 125



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D+M +    +     ++  ++L+ ++NIS ++V DD     GI+  +D+L+
Sbjct: 7   VRDLMNRGIYEVSLKDKVSDVIKLMGENNISSVVVSDDNNVYWGIITDIDILK 59


>gi|85715671|ref|ZP_01046651.1| IMP dehydrogenase [Nitrobacter sp. Nb-311A]
 gi|85697610|gb|EAQ35487.1| IMP dehydrogenase [Nitrobacter sp. Nb-311A]
          Length = 498

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++              G+   +            +   
Sbjct: 46  NIPIMASAMDTVTEARMAIAMAQAGGLGVIH-RNFDAEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++S+  F  + VV  G      KL GI+T  D+            V +
Sbjct: 105 IGPDAMLSDALALMSDHGFSGIPVVTGGSGASPGKLVGILTNRDVRFATDP---RQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQEEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDMEKA 213


>gi|197121928|ref|YP_002133879.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp. K]
 gi|196171777|gb|ACG72750.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp. K]
          Length = 487

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 22/207 (10%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALA 190
           + + +   +A   D VL LP E +  P                 P  S+ M       +A
Sbjct: 1   MLNRDDLRLALTFDDVLLLPAESDVLPKSVETSTRLTRNIQLNIPIVSSAMDTVTEARMA 60

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           IA+       F   +  V     ++  +    S V+        V+   PL  A+ ++ E
Sbjct: 61  IAMAAVGGLGFIHKNLTVEDQAAEVVKVKKYESAVV---TEPITVEPDAPLHRAVALMRE 117

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                + VV +G +L GI+T  D+   F K+L    VE VM K+     E   +  A +L
Sbjct: 118 NGISGIPVV-QGGRLLGILTNRDLR--FEKNL-EQRVEQVMTKDLVTAHEGVTIEQAKEL 173

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L +H I  L+VV++  +  G+V   D+
Sbjct: 174 LHRHRIEKLLVVNERYELRGLVTIKDI 200


>gi|297243820|ref|ZP_06927750.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis AMD]
 gi|296888241|gb|EFH26983.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis AMD]
          Length = 514

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             PT SA M       +AIA+          RN S +D        +   + +       
Sbjct: 56  KVPTISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 107

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L D   +        + VVD    L GIIT  D+     +D + L V
Sbjct: 108 MITDPLTVHPDATLADLDKLCGRFHISGLPVVDSENHLVGIITNRDMRFIASEDYDRLKV 167

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +DVM + N      D     A +LL  + I  L +VD   K  G++   D ++
Sbjct: 168 KDVMTRENLVTGPSDISKEDAHRLLADNKIEKLPLVDAEGKLTGLITVKDFVK 220


>gi|164687030|ref|ZP_02211058.1| hypothetical protein CLOBAR_00656 [Clostridium bartlettii DSM
           16795]
 gi|164603915|gb|EDQ97380.1| hypothetical protein CLOBAR_00656 [Clostridium bartlettii DSM
           16795]
          Length = 489

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 67/182 (36%), Gaps = 14/182 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           +    +         P  SA M       +AI++            ++H    +      
Sbjct: 28  IDTKTKLTKDIELNIPLMSASMDTVTESKMAISMARQGGIG-----IIHKNMSIEEQASE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   + +       G  + DA  I+++ +   V +VDE   L GIIT  DI   
Sbjct: 83  VDRVKRSESGVIVDPFSLSKGHTIQDADDIMAKYKISGVPIVDENNILIGIITNRDIK-- 140

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           F  D++   +E+ M    +     E   L  A  +L +H I  L +VDD     G++   
Sbjct: 141 FETDMSR-KIEEAMTTQEHLVTAKEGVTLEQAKDILGKHRIEKLPIVDDEGHLKGLITIK 199

Query: 334 DL 335
           D+
Sbjct: 200 DI 201


>gi|103486516|ref|YP_616077.1| inosine-5'-monophosphate dehydrogenase [Sphingopyxis alaskensis
           RB2256]
 gi|98976593|gb|ABF52744.1| inosine-5'-monophosphate dehydrogenase [Sphingopyxis alaskensis
           RB2256]
          Length = 485

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPILSSAMDTVTEADMAILMAQIGGIG-----VLHRNLTIEEQAAAVRQVKRFESGMIV 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    PL DA  ++++ R   + VV+ G KL GI+T  D+      D     V ++
Sbjct: 94  NPITITPDAPLSDATALMNQHRISGIPVVESGGKLVGILTHRDVRFA---DNPGQPVREL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +        A +LL Q  I  L+VVDD    IG++   D+ + 
Sbjct: 151 MTAENLATVRPGVGQDEARRLLHQRRIEKLLVVDDDYHCIGLITVKDMEKA 201


>gi|302418246|ref|XP_003006954.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
 gi|261354556|gb|EEY16984.1| CBS domain-containing protein [Verticillium albo-atrum VaMs.102]
          Length = 750

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K G  + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 178 QIKPGTTVAEAAQLMAAKREDCVLVTDDDDRISGIFTAKDLAFRVVGAGMKPTHITIAEI 237

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 238 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 281



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E R   V V D    + GI T  D+  R     L+  T SV
Sbjct: 345 PPTTVSVRTSVREAAQLMKENRTTAVLVQD-QGAITGIFTSKDVVLRVIAVGLDPATCSV 403

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 404 VRVMTPHPDFASMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 453


>gi|27379083|ref|NP_770612.1| inosine 5'-monophosphate dehydrogenase [Bradyrhizobium japonicum
           USDA 110]
 gi|27352233|dbj|BAC49237.1| inosine-5`-monophosphate dehydrogenase [Bradyrhizobium japonicum
           USDA 110]
          Length = 497

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 45  NIPIMASAMDTVTEARMAIAMAQAGGLGVIH-RNFDPEGQAAQVRQVKRYESGMVVNPLT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++S+     + VV    K     L GI+T  D+     +      V +
Sbjct: 104 ISPEATLDDALKLMSDHGISGIPVVTGAGKSTPGKLVGILTNRDVRFATDR---RQKVSE 160

Query: 288 VMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M       + E+     A ++L QH I  L+VVD+  + +G+V   D+ + 
Sbjct: 161 LMTHEGLVTVRENVSQDEARRMLHQHRIEKLLVVDEQYRCVGLVTVKDMEKA 212


>gi|323706022|ref|ZP_08117592.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           xylanolyticum LX-11]
 gi|323534636|gb|EGB24417.1| inosine-5'-monophosphate dehydrogenase [Thermoanaerobacterium
           xylanolyticum LX-11]
          Length = 484

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      +LAIA+            ++H    +    +    V  S   +  
Sbjct: 42  NIPLISAGMDTVTESSLAIAIAREGGIG-----IIHKNMPIERQALEVDRVKRSEHGVIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++   R   V +   G KL GIIT  DI   F  +L+   +++V
Sbjct: 97  NPFYLTPDHKIQDAVELMERYRISGVPITV-GSKLMGIITNRDIR--FESNLDR-PIKEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T +  A ++L++H I  L +VD+     G++   D+ + 
Sbjct: 153 MTKENLVTAPVGTTIDEAREILKKHKIEKLPLVDEDNNLKGLITIKDIEKA 203


>gi|157691297|ref|YP_001485759.1| inosine 5'-monophosphate dehydrogenase [Bacillus pumilus SAFR-032]
 gi|157680055|gb|ABV61199.1| IMP dehydrogenase [Bacillus pumilus SAFR-032]
          Length = 488

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E  S      P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVELTSTLKLNIPVISAGMDTVTESQMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPEHQVFDAEHLMGKYRISGVPIVNNIEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K         T L  A ++L+Q+ I  L ++DD     G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTASVGTTLEEAEKILQQYKIEKLPLLDDEGTLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|212225036|ref|YP_002308272.1| inosine 5'-monophosphate dehydrogenase [Thermococcus onnurineus
           NA1]
 gi|212009993|gb|ACJ17375.1| inosine-5'-monophosphate dehydrogenase [Thermococcus onnurineus
           NA1]
          Length = 486

 Score = 96.5 bits (239), Expect = 5e-18,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEMVKKVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L  A+ ++ +     + VV E  ++ GIIT+ DI     +      V +V
Sbjct: 102 DVITIEPDETLDYALFLMEKNDIDGLPVVGEDGRIIGIITKKDIAAKEGRL-----VREV 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++   + ED  +  A+ L+ ++ I+ L VVD   K +GI+   DL+
Sbjct: 157 MTRDVITVPEDIAVEDALTLMVENRIARLPVVDGDGKLVGIITVSDLM 204


>gi|188588749|ref|YP_001919809.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum E3
           str. Alaska E43]
 gi|188499030|gb|ACD52166.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E3
           str. Alaska E43]
          Length = 484

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSAAMDTVTQSKMAIAMAREGGIG-----IIHKNMSIEQQAKEVDKVKRQENGIIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ + R   V +  E  KL GI+T  D+   F  D +   + +V
Sbjct: 96  DPIFLSKENTLQDAENLMGQYRISGVPIT-ENGKLVGILTNRDV--TFETDFSK-KISEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A ++L++H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTSIDEAKEILKKHKIEKLPLVDKDGNLKGLITIKDIDKAK 203


>gi|315453154|ref|YP_004073424.1| inosine-5'-monophosphate dehydrogenase [Helicobacter felis ATCC
           49179]
 gi|315132206|emb|CBY82834.1| inosine-5'-monophosphate dehydrogenase [Helicobacter felis ATCC
           49179]
          Length = 481

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 8/181 (4%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKLGTLF 217
           V    K  ++    +   ++A+  +   D A+A+A L        +  V     ++  + 
Sbjct: 27  VSLASKLSKNIGLNIPFVSAAMDTVTEFDTAIAMARLGGMGIIHKNMDVEAQVQQVLKVK 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              S V+H       +     L +A  I    +   V V+D    L GI+T  D+   F 
Sbjct: 87  KSESGVIH---DPIYIHAEASLGEAKAIADNYKISGVPVIDAHGILIGILTNRDMR--FE 141

Query: 278 KDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D +   V  VM K P V       L  A  ++ QH I  L +VD+     G++   D+ 
Sbjct: 142 TDWSK-KVGAVMTKPPLVTAPVGVSLEQAQAIMHQHKIEKLPLVDEHNVLKGLITIKDIQ 200

Query: 337 R 337
           +
Sbjct: 201 K 201


>gi|150021453|ref|YP_001306807.1| inosine-5'-monophosphate dehydrogenase [Thermosipho melanesiensis
           BI429]
 gi|149793974|gb|ABR31422.1| inosine-5'-monophosphate dehydrogenase [Thermosipho melanesiensis
           BI429]
          Length = 483

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 14/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LA A+            ++H    +         V  + +    
Sbjct: 37  NIPLVSAAMDTVTESELAKAIAREGGIG-----IIHKNLSIEEQAHQVKIVKRTENGIID 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A  I++E + G + VVDE ++L G++T  DI   F ++L    V+++
Sbjct: 92  DPVTVFPDVSVEEAEKIMAEYKIGGLPVVDEQKRLLGLVTNRDIR--FERNL-KRPVKEL 148

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M    +  V  E   L  A  +L ++ I  L +V       G++   D+
Sbjct: 149 MTPVEDLIVANEGISLEEARDILHENKIEKLPLVKSDGTLSGLITIKDI 197


>gi|294659574|ref|XP_461972.2| DEHA2G09790p [Debaryomyces hansenii CBS767]
 gi|199434069|emb|CAG90442.2| DEHA2G09790p [Debaryomyces hansenii]
          Length = 607

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 52/115 (45%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                 + K    + +   ++S KR  C+ VV++  +L GI T  D+  R     L+   
Sbjct: 69  KPSEPIICKTSSTVYEVSQLMSAKRENCILVVNDIGELLGIFTAKDLAFRIVGAGLSATS 128

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++ +M  NP     +T  + A+ L+       L V+D+  + +G++   D+ +
Sbjct: 129 VTIDQIMTPNPMCANSNTPASEALNLMVHKGFRHLPVLDENNQIVGVL---DITK 180



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 53/130 (40%), Gaps = 6/130 (4%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K          V+ +  +     +   + DA  ++ E +   V + D  +++ GI T  D
Sbjct: 227 KNKMNGPTLESVLDATTTPVYTTVKTTVYDATVLMKENKTTAVLIKDTNEEVAGIFTSKD 286

Query: 272 I-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  R     L+    S+  VM   P +  +D  +  A++ + +     L +V +    +G
Sbjct: 287 VVLRVIAAGLDPKKCSIVRVMTPQPDIAKQDLSIQEALRQMFEGRYLNLPIVGNENDIVG 346

Query: 329 IVHFLDLLRF 338
           IV   D+L+ 
Sbjct: 347 IV---DVLKL 353



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 28/185 (15%), Positives = 57/185 (30%), Gaps = 53/185 (28%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L    V    +M             P  +A+ ++  K F  + V+D
Sbjct: 110 FTAKDLAFRIVGAGLSATSVTIDQIMTPNPMCA--NSNTPASEALNLMVHKGFRHLPVLD 167

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL----------------------------------- 283
           E  ++ G++   DI + + + +  L                                   
Sbjct: 168 ENNQIVGVL---DITKCYAQQMEKLERMHSSSKKLYEALDNVHSEMGMMQQPLHVFQYFE 224

Query: 284 ------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                       SV D     P      T +  A  L++++  + +++ D  ++  GI  
Sbjct: 225 NLKNKMNGPTLESVLD-ATTTPVYTTVKTTVYDATVLMKENKTTAVLIKDTNEEVAGIFT 283

Query: 332 FLDLL 336
             D++
Sbjct: 284 SKDVV 288


>gi|34558190|ref|NP_908005.1| inosine 5'-monophosphate dehydrogenase [Wolinella succinogenes DSM
           1740]
 gi|34483909|emb|CAE10905.1| INOSINE-5'-MONOPHOSPHATE DEHYDROGENASE [Wolinella succinogenes]
          Length = 481

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M        AIA+            V+H    +         V  S   + +
Sbjct: 40  NAPIISAAMDTVTEYRAAIAMARLGGIG-----VIHKNMDIEAQVEQVKKVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L  A  +    +   V VVD+   L GI+T  D+   F  DL+ L V +V
Sbjct: 95  DPIYISPENTLAQAKALTDNYKISGVPVVDKEGILIGILTNRDVR--FETDLSRL-VGEV 151

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P ++ +  T L  A +++ QH I  L +V++     G++   D+ +
Sbjct: 152 MTKAPLIVGKVGTSLEEAREIMHQHKIEKLPIVNEKGILKGLITIKDIQK 201



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T        + +   + + K+G  L +A  I+ + +   + +V+E   LKG+IT  DI 
Sbjct: 141 ETDLSRLVGEVMTKAPLIVGKVGTSLEEAREIMHQHKIEKLPIVNEKGILKGLITIKDIQ 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KRIE 204


>gi|86739349|ref|YP_479749.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. CcI3]
 gi|86566211|gb|ABD10020.1| inosine-5'-monophosphate dehydrogenase [Frankia sp. CcI3]
          Length = 537

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  S+ M       +AIA+            VLH    +         V  S   +   
Sbjct: 79  VPLVSSAMDTVTEARMAIAMARQGGVG-----VLHRNLSIDEQAQQVDMVKRSESGMITA 133

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                 G  L DA  +++  R   V V +   +L GI+T  DI   F +D  +  V+DVM
Sbjct: 134 PVTCGPGATLEDANVLMARYRISGVPVTESDGRLVGIVTNRDIR--FERD-YSRRVQDVM 190

Query: 290 IKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P +          A+ LLR+H +  L +VD+  +  G++   D  +
Sbjct: 191 TPMPLITAPVGVSPEDALALLRRHKVEKLPIVDERDRLRGLITVKDFTK 239


>gi|332704336|ref|ZP_08424424.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332554485|gb|EGJ51529.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 485

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 72/170 (42%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIA+           +  +     ++G +    S ++H     
Sbjct: 41  NIPIISAAMDTVTESGMAIAMARQGGVGVIHKNLSIEDHVYEIGKVKKSESGMIH---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A+ ++ E R   + VV EG +L GI+T  D+   F  D+++  V DVM 
Sbjct: 98  VTISPELTVGQALDLMGEYRISGLPVV-EGDRLVGILTNRDVR--FVTDMSS-KVADVMT 153

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            K    + E T L  A   L +  I  L+VVD+  K  G++   D+ + G
Sbjct: 154 SKRLVTVPEGTTLEEAKMHLHEARIEKLLVVDENNKLKGLITIKDIEKKG 203


>gi|15895958|ref|NP_349307.1| inosine 5'-monophosphate dehydrogenase [Clostridium acetobutylicum
           ATCC 824]
 gi|15025734|gb|AAK80647.1|AE007768_1 IMP dehydrogenase [Clostridium acetobutylicum ATCC 824]
 gi|325510110|gb|ADZ21746.1| inositol-5-monophosphate dehydrogenase [Clostridium acetobutylicum
           EA 2018]
          Length = 485

 Score = 96.5 bits (239), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGGIG-----IIHKNMTIAEQASEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ ++   R   V + D   KL GIIT  DI   F  D +   +E++
Sbjct: 96  NPISLSKDNSVQEALDLMKRYRISGVPITDNAGKLIGIITNRDIV--FETDYSK-KIEEL 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   N     + T +  A  LL++H I  L +VD+     G++   D+
Sbjct: 153 MTTENLVTAPQGTTIDEAKNLLKKHKIEKLPLVDENFVLKGLITIKDI 200



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + ++   ++  R G + ++ +   +    +E D  +     +         I NP  +
Sbjct: 50  DTVTESKMAIAMAREGGIGIIHKNMTIAEQASEVDRVKRQENGV---------ITNPISL 100

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D  +  A+ L++++ IS + + D+  K IGI+   D++
Sbjct: 101 SKDNSVQEALDLMKRYRISGVPITDNAGKLIGIITNRDIV 140


>gi|241203226|ref|YP_002974322.1| inosine 5'-monophosphate dehydrogenase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240857116|gb|ACS54783.1| inosine-5'-monophosphate dehydrogenase [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 494

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPIISSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPIEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L DA+ ++       + VV++  +L GI+T  D+     +      + ++M K+
Sbjct: 105 IGPDETLADALGLMKSYSISGIPVVEKSGRLVGILTNRDVRFATDQ---EQKIHELMTKD 161

Query: 293 -PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 KLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|162147595|ref|YP_001602056.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209542228|ref|YP_002274457.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|161786172|emb|CAP55754.1| Inosine-5'-monophosphate dehydrogenase [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209529905|gb|ACI49842.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 500

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     DA+AIA+ +          V+H    +         V      + +
Sbjct: 53  NIPLISSAMDTVTEDAMAIAMAQQGG-----MGVIHKNLSVEEQAEQVRRVKRFESGMVV 107

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     L D   I+S      + V++ E ++L G++T  D+          L V+ 
Sbjct: 108 NPVTVWPDQTLADVNAIMSRHGISGLPVIERETKRLVGMLTNRDVRFATDP---ALRVDS 164

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   +  D     A QLL +H I  L+VVDD  + +G++   D+ + 
Sbjct: 165 LMTRENLVTVGADVGHDQARQLLHRHRIEKLLVVDDEGRCVGLITVKDIEKA 216


>gi|153953102|ref|YP_001393867.1| inosine 5'-monophosphate dehydrogenase [Clostridium kluyveri DSM
           555]
 gi|219853753|ref|YP_002470875.1| hypothetical protein CKR_0410 [Clostridium kluyveri NBRC 12016]
 gi|146345983|gb|EDK32519.1| GuaB [Clostridium kluyveri DSM 555]
 gi|219567477|dbj|BAH05461.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 484

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 41  NIPLISASMDTVTDSKMAIAMAREGGLG-----IIHKNMSIEHQAMEVDKVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++S+ R   + +     KL GIIT  DI   F  D +   + +V
Sbjct: 96  DPFYLSPDNSINDALALMSKYRISGIPITV-NYKLVGIITNRDI--IFETDYDR-KISEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  KN     E+T +  A ++L+ H I  L +VD      G++   D+ +  
Sbjct: 152 MTCKNLITAPENTTIEEAKEILKTHKIEKLPLVDGNNNLRGLITIKDIEKVK 203


>gi|148981449|ref|ZP_01816415.1| polysialic acid capsule expression protein [Vibrionales bacterium
           SWAT-3]
 gi|145960871|gb|EDK26202.1| polysialic acid capsule expression protein [Vibrionales bacterium
           SWAT-3]
          Length = 99

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 6/104 (5%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++     +  E + + S+       +S  +   V+ +   + ++V TGIGK+GHI  K
Sbjct: 2   DILERVKYVLSEEAKAIQSVH------VSDSYKDVVKLMANCQSKIVTTGIGKAGHIAHK 55

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            ++TL+STG+PS F+H AEA+HGDLG+I+  D++I  S SG S 
Sbjct: 56  FSATLSSTGSPSVFLHPAEAAHGDLGIISPSDILIAFSTSGKSR 99


>gi|163793432|ref|ZP_02187407.1| Predicted signal-transduction protein containing CBS domains [alpha
           proteobacterium BAL199]
 gi|159181234|gb|EDP65749.1| Predicted signal-transduction protein containing CBS domains [alpha
           proteobacterium BAL199]
          Length = 142

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
           + +          ++  V     +   + +++E+R G V VV     L GI TE D+  R
Sbjct: 1   MTLTIIPDAIRAQTLVTVTPSDSVRATVRLMTERRIGAVPVVGPDGALVGIFTERDVMCR 60

Query: 275 NFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +DL+  T  V  VM  +PK    D  +  A++ +       L VVD+  K + IV  
Sbjct: 61  VVDRDLDPATTPVGQVMTASPKTATPDWPILKALEHMADGGYRHLPVVDN-GKLLAIVSI 119

Query: 333 LDLLRF 338
            DL   
Sbjct: 120 RDLYAA 125


>gi|317154893|ref|YP_004122941.1| CBS domain-containing protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316945144|gb|ADU64195.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 225

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------------HKDLNT 282
              ++DA  IL +K      VVD    L GI+++ DI                    LNT
Sbjct: 17  NSSVMDAADILRQKDIRQFPVVDGQGVLVGIVSDRDIRDAMPSKFIPGDCTDGREGGLNT 76

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+  D+M   P  +  DT +    ++L +H I  L VV +  K +GI+   D++RF
Sbjct: 77  LTAGDIMTPGPLTVAPDTAINAVAEILVRHKIGGLPVV-EGGKLVGIITQADVMRF 131



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  N   +  ++ +  A  +LRQ +I    VVD     +GIV   D+
Sbjct: 3   VRDWMTVNVMTLGVNSSVMDAADILRQKDIRQFPVVDGQGVLVGIVSDRDI 53



 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     +     IL   + G + VV EG KL GIIT+ D+ R  
Sbjct: 90  VAPDTAINAVAEILVRHKIGGLPVV-EGGKLVGIITQADVMRFL 132


>gi|241888461|ref|ZP_04775771.1| inosine-5'-monophosphate dehydrogenase [Gemella haemolysans ATCC
           10379]
 gi|241864853|gb|EER69225.1| inosine-5'-monophosphate dehydrogenase [Gemella haemolysans ATCC
           10379]
          Length = 487

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 66/186 (35%), Gaps = 15/186 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLKVSLTEKIKLSVPVISAAMDTVTEHKMAIAMAREGGLG-----VIHKNMSIEEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIF 273
              V  S   +            + +A  ++ + R   V +V+     K+ GIIT  D+ 
Sbjct: 85  VRKVKRSESGVITDPFFLTPDSLVYEAEELMQQYRISGVPIVNNEKDMKVVGIITNRDMR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D+    + +VM K +     E T L  A  +LR H I  L++ D+  K  G++  
Sbjct: 145 FLTDFDI---KISEVMTKEHLITAPEKTTLEEASGILRSHKIEKLILTDEEGKLTGLITI 201

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 202 KDIEKL 207


>gi|254780889|ref|YP_003065302.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           asiaticus str. psy62]
 gi|254040566|gb|ACT57362.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           asiaticus str. psy62]
          Length = 493

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 70/174 (40%), Gaps = 21/174 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES-------RNFSE-NDFYVLHPGGKLGTLFVCASDVM 224
             P  SA M       LAIA+ ++       RNFS       +H   K  +         
Sbjct: 46  NLPIMSAAMDQVTDSRLAIAMAQAGGLGVIHRNFSPSEQVAQVHQVKKFESGM------- 98

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTL 283
               +   +     L DA+ ++ +     + VV+    KL GI+T  D+    +      
Sbjct: 99  --VVNPVTISPYATLADALALMKKYSISGIPVVESDVGKLVGILTNRDVRFASNA---QQ 153

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V ++M +N   + +   L  A  LL QH I  L+VVDD    IG++   D+ R
Sbjct: 154 AVGELMTRNLITVKKTVNLENAKALLHQHRIEKLLVVDDDGCCIGLITVKDIER 207


>gi|16331172|ref|NP_441900.1| chloride channel protein [Synechocystis sp. PCC 6803]
 gi|1653666|dbj|BAA18578.1| chloride channel protein [Synechocystis sp. PCC 6803]
          Length = 899

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            L   + I+S        VV +G KL G+ T+ D+     + ++ ++++ +M  NP  + 
Sbjct: 471 TLAQVLPIMSNSHHRGFPVV-QGGKLVGVFTQTDLANAAQESVH-IALKQIMTPNPITVD 528

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  L+  + LL ++ +S L VV+   K +GI+   D++R  +
Sbjct: 529 PEAPLSDVLYLLNRYQLSRLPVVEGDNKLVGIITRTDIIREEV 571



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 6/76 (7%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F++ D              V  +       +   V    PL D + +L+  +   + VV+
Sbjct: 499 FTQTDLA------NAAQESVHIALKQIMTPNPITVDPEAPLSDVLYLLNRYQLSRLPVVE 552

Query: 259 EGQKLKGIITEGDIFR 274
              KL GIIT  DI R
Sbjct: 553 GDNKLVGIITRTDIIR 568


>gi|186680817|ref|YP_001864013.1| polynucleotide adenylyltransferase region [Nostoc punctiforme PCC
           73102]
 gi|186463269|gb|ACC79070.1| Polynucleotide adenylyltransferase region [Nostoc punctiforme PCC
           73102]
          Length = 898

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  IL       ++VVD   +L GII+  D+    H   +   V
Sbjct: 320 MSSPVRTILPETTIAEAQRILLRYGHSGLSVVDAQGQLVGIISRRDLDIALHHGFSHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M  N K I  DT L     L+  ++I  L V+ +  + +G+V   D+LR 
Sbjct: 380 KGYMTTNLKTITPDTTLPQIESLMVTYDIGRLPVL-ENGQLVGLVTRTDVLRE 431



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + IL +T +  A ++L ++  S L VVD   + +GI+   DL
Sbjct: 314 LTARDLMSSPVRTILPETTIAEAQRILLRYGHSGLSVVDAQGQLVGIISRRDL 366



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%), Gaps = 1/71 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   ++  +     L    +++     G + V+ E  +L G++T  D
Sbjct: 369 ALHHGFSHAPVKGYMTTNLKTITPDTTLPQIESLMVTYDIGRLPVL-ENGQLVGLVTRTD 427

Query: 272 IFRNFHKDLNT 282
           + R  H++ + 
Sbjct: 428 VLRELHQERDE 438


>gi|315644413|ref|ZP_07897546.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
 gi|315280163|gb|EFU43456.1| inosine-5'-monophosphate dehydrogenase [Paenibacillus vortex V453]
          Length = 485

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEAPLAIAIAREGGIG-----IIHKNMTVEQQAEEVDRVKRSESGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +VDE  KL GI+T  D+   F  D +T+ + +V
Sbjct: 98  NPFSLHADHLVSDAEKLMGKFRISGVPIVDESNKLIGILTNRDLR--FVHDYSTV-ISEV 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A  +L++H I  L +VD+     G++   D+ + 
Sbjct: 155 MTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDEDNVLKGLITIKDIEKA 205



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 10/112 (8%)

Query: 225 HSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           H   +IPL+  G   + +A   ++  R G + ++ +   ++         +    D    
Sbjct: 39  HVRLNIPLISAGMDTVTEAPLAIAIAREGGIGIIHKNMTVE--------QQAEEVDRVKR 90

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S   V+  NP  +  D L++ A +L+ +  IS + +VD+  K IGI+   DL
Sbjct: 91  SESGVIT-NPFSLHADHLVSDAEKLMGKFRISGVPIVDESNKLIGILTNRDL 141



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L DA  IL + +   + +VDE   LKG+IT  DI +  
Sbjct: 147 YSTVISEVMTSENLVTAPVGTTLQDAEMILQKHKIEKLPLVDEDNVLKGLITIKDIEKAI 206

Query: 277 H 277
            
Sbjct: 207 Q 207


>gi|188584671|ref|YP_001916216.1| inosine-5'-monophosphate dehydrogenase [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179349358|gb|ACB83628.1| inosine-5'-monophosphate dehydrogenase [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 485

 Score = 96.1 bits (238), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+            ++H    +         V  S   +  
Sbjct: 44  NIPLMSAGMDTVTEARLAVAMAREGGIG-----IIHKNMSIDKQATEVDRVKRSEHGVIT 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++   R   V +  E  KL GIIT  D+   F  D N   +++V
Sbjct: 99  NPFSLSQNHKISDAAALMERYRISGVPIT-ESGKLIGIITNRDLR--FETDFNR-PIKEV 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   N     E   ++ A ++L+++ +  L + DD     G++   D+
Sbjct: 155 MTDSNLITASEGISMSEAQKILQENKVEKLPLTDDEGNLKGLITIKDI 202


>gi|332158567|ref|YP_004423846.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
 gi|331034030|gb|AEC51842.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus sp. NA2]
          Length = 485

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEQVKRVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ ++ +     + VV EG ++ GIIT+ DI     +     +V+++
Sbjct: 102 DVITIAPDETIDYALFLMEKHGIDGLPVV-EGDRVVGIITKKDIAAREGR-----TVKEL 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +    + E   +  A++++ ++ I  L VV++  K +G++   DL+
Sbjct: 156 MTREVITVPESVDVEEALKIMMENRIDRLPVVNEDGKLVGLITMSDLV 203


>gi|317131280|ref|YP_004090594.1| inosine-5'-monophosphate dehydrogenase [Ethanoligenens harbinense
           YUAN-3]
 gi|315469259|gb|ADU25863.1| inosine-5'-monophosphate dehydrogenase [Ethanoligenens harbinense
           YUAN-3]
          Length = 491

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+            ++H    +         V  S + +  
Sbjct: 48  NVPILTAAMDTVTESKMAIAIAREGGIG-----IIHKNMTIEQQAEEVDKVKRSENGVIA 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +  E  KL GIIT  D+   F  D +T  V DV
Sbjct: 103 NPFYLSPDHLVRDADALMGKYRISGVPIC-ENGKLVGIITNRDLR--FITDFDT-KVSDV 158

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K +       T    A  +L +H I  L++VDD  +  G++   D+
Sbjct: 159 MTKEHLVTAPVGTTPEQAKSILMKHKIEKLLIVDDEGRLKGLITIKDI 206


>gi|227505286|ref|ZP_03935335.1| IMP dehydrogenase [Corynebacterium striatum ATCC 6940]
 gi|227198119|gb|EEI78167.1| IMP dehydrogenase [Corynebacterium striatum ATCC 6940]
          Length = 506

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/212 (18%), Positives = 75/212 (35%), Gaps = 22/212 (10%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L  +T ++  ++   ++IV   +    +         P  SA M       +AIA+
Sbjct: 14  NKVALYGLTFDDVLLLPAESNIVPSEVDTSAQFTRNIRLGVPLVSAAMDTVTEARMAIAM 73

Query: 194 LE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
                     RN S  D            + +                    + +   + 
Sbjct: 74  ARQGGIGVLHRNLSTEDQAT--------QVEIVKRSESGMVTDPVTATPDMTIQEVDELC 125

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVA 305
           +  R   + VVD    L GI T  D+   F  D     V ++M   P V+ ++ +    A
Sbjct: 126 ARFRISGLPVVDANGTLVGICTNRDMR--FEPDFGR-KVSEIMTPMPLVVAKEGVAKEEA 182

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + LL  + +  L +VDD  K +G++   D ++
Sbjct: 183 LALLSSNKVEKLPIVDDDNKLVGLITVKDFVK 214


>gi|163788668|ref|ZP_02183113.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteriales
           bacterium ALC-1]
 gi|159875905|gb|EDP69964.1| putative inosine-5'-monophosphate dehydrogenase [Flavobacteriales
           bacterium ALC-1]
          Length = 489

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 14/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH    +         V  +   + +
Sbjct: 45  NIPVVSAAMDTVTESKMAIAMAQEGGIG-----VLHKNMTIEQQADKVRRVKRAESGMII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                 +   + DA   + E   G + +VD    LKGI+T  D+     +  N   + +V
Sbjct: 100 DPVTLGMDAVVADAKNAMREHSIGGIPIVDANGILKGIVTNRDLRF---EHQNDRPIVEV 156

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +N     + T L  A  +L+ + I  L++V +  K  G++ F D+ +
Sbjct: 157 MTGENLVTAPKGTSLKDAEAILQANKIEKLLIV-EGDKLAGLITFRDITK 205


>gi|146340150|ref|YP_001205198.1| inosine 5'-monophosphate dehydrogenase [Bradyrhizobium sp. ORS278]
 gi|146192956|emb|CAL76963.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Bradyrhizobium sp. ORS278]
          Length = 495

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++            P G+   +            +   
Sbjct: 43  NIPIMASAMDTVTEARMAIAMAQAGGVGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 101

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++ +  F  + VV  G K     L GI+T  D+            + +
Sbjct: 102 IAPDATLADALALMKDYGFSGIPVVTGGGKGIPGKLVGILTNRDVRFATDP---RQKISE 158

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVDD  + +G++   D+ + 
Sbjct: 159 LMTHENLVTVREGVGQDEAKKILHKHRIEKLLVVDDQYRCVGLITVKDMEKA 210


>gi|91976741|ref|YP_569400.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB5]
 gi|91683197|gb|ABE39499.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB5]
          Length = 498

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ +             P G+   +            +   
Sbjct: 46  NVPIIASAMDTVTEARMAIAMAQVGGIGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV         KL GI+T  D+         +  V +
Sbjct: 105 IGPDAKLADALALMNQYGFSGIPVVTGAEGRGPGKLIGILTNRDVRFATDP---SQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQDEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDMEKA 213


>gi|169618018|ref|XP_001802423.1| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
 gi|160703532|gb|EAT80608.2| hypothetical protein SNOG_12196 [Phaeosphaeria nodorum SN15]
          Length = 671

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++E++
Sbjct: 106 QIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEI 165

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+     GI+  
Sbjct: 166 MTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDI 209



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A +++ E     V V D    + GI T  D+  R     L+  T SV
Sbjct: 273 PPVTVSVRTSVKEAASLMKENHTTAVLVQD-QGSITGIFTSKDVVLRVIAAGLDPATCSV 331

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+ D  + +G+V   D+L+ 
Sbjct: 332 VRVMTPHPDFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMV---DVLKL 381



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 56/179 (31%), Gaps = 44/179 (24%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  +    V   ++M         K      DA+ ++  K F  + V+D
Sbjct: 141 FTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCA--KTDTSATDALDLMVRKGFRHLPVMD 198

Query: 259 EGQKLKGI--IT--EGDIFRNFHKDLNTLS------------------------VEDV-- 288
           E   + GI  IT    D      +  ++                          VE +  
Sbjct: 199 ENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQAEMGSSQPQQIIQYVEAIRQ 258

Query: 289 -MI----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M             P  +   T +  A  L+++++ + ++V D      GI    D++
Sbjct: 259 KMSGPTLESVLNGLPPVTVSVRTSVKEAASLMKENHTTAVLVQD-QGSITGIFTSKDVV 316


>gi|52550131|gb|AAU83980.1| conserved hypothetical protein [uncultured archaeon GZfos35B7]
          Length = 396

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 56/113 (49%), Gaps = 2/113 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLS 284
                 +    P IDAI  L++       +VD+  +L GI T+ DI +   K   L    
Sbjct: 68  MFKPHCIHKDTPCIDAICELTDSGQRAAPIVDDNGELVGITTDYDIMKEGSKSQILKDTK 127

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V  VM ++P  + +   +  A  ++R++N+  ++VVD+ +  +GIV   D+L+
Sbjct: 128 VAKVMTRSPAYVEQSESIGKARSIIRKNNVGRVLVVDENEDLVGIVTGGDILK 180



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+ ++  G K   L       + +      V+    +  A +I+ +   G V VVDE + 
Sbjct: 110 DYDIMKEGSKSQILKDTKVAKVMTRSPAY-VEQSESIGKARSIIRKNNVGRVLVVDENED 168

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDV---------------MIKNPKVILEDTLLTVAMQ 307
           L GI+T GDI +  +K    ++V +V               M         D  L     
Sbjct: 169 LVGIVTGGDILKRIYKPKRKMTVGEVKGENVPRMGQAVSFIMSSPVISADIDANLADIAN 228

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L++ H+I  + +V D     GIV   D++
Sbjct: 229 LMQTHDIRSVPIVTD-GVPRGIVTIPDIM 256



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLN 281
           +  S   +  +     +   I I+ + +F  + V+D  +  +  I+   D+    + +  
Sbjct: 7   IEVSTREVVTIMPDTSIAKTIAIMEKNKFHNLVVLDSAEIYMVNIL---DLLIASNPESY 63

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              V++ M K P  I +DT    A+  L         +VDD  + +GI    D+++ G
Sbjct: 64  ---VDEFMFK-PHCIHKDTPCIDAICELTDSGQRAAPIVDDNGELVGITTDYDIMKEG 117



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + +V  +    I+ DT +   + ++ ++    L+V+D  +    +V+ LDLL
Sbjct: 1   MFDEPIIEVSTREVVTIMPDTSIAKTIAIMEKNKFHNLVVLDSAEIY--MVNILDLL 55


>gi|310791950|gb|EFQ27477.1| hypothetical protein GLRG_01972 [Glomerella graminicola M1.001]
          Length = 682

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K G  + +A  +++ KR  CV V D+  ++ GI T  D+        +  + +++ ++
Sbjct: 111 QIKPGTSVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKPSHITIAEI 170

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 171 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 214



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ + R   V V D    + GI T  D+  R     L+  T S
Sbjct: 277 RPPTTVSVRTSVREAAQMMKDNRTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPATCS 335

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 336 VVRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 386


>gi|260943069|ref|XP_002615833.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
 gi|238851123|gb|EEQ40587.1| hypothetical protein CLUG_04715 [Clavispora lusitaniae ATCC 42720]
          Length = 627

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-- 282
                 + K    +  A  ++S +R  C+ VV++  +L GI T  D+  R     LN   
Sbjct: 99  KPSEAIICKKNATVYQAAQLMSARRENCILVVNDDGELIGIFTAKDLAFRVVGSGLNANA 158

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +E +M  +P     D+  + A+ L+ +     L V+DD  + +G++  
Sbjct: 159 TLIEQIMTPSPICANADSPASEALTLMVEKGFRHLPVLDDKSRIVGVLDI 208



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/124 (30%), Positives = 56/124 (45%), Gaps = 6/124 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF 276
              S V+ S  +     + C +++A   + E R   V V D   +L GI T  D+  R  
Sbjct: 263 PTLSSVLDSATTPIYTNVKCSVLEATIQMKENRTTAVLVNDTSGELTGIFTSKDVVLRVI 322

Query: 277 HKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              LN  T SV  VM   P V  E T +  A++ + + +   L VVD+    IGIV   D
Sbjct: 323 AAGLNPKTCSVVRVMTPQPDVANERTSIQQALRQMFEGHYLNLPVVDNEGDIIGIV---D 379

Query: 335 LLRF 338
           +L+ 
Sbjct: 380 VLKL 383


>gi|62261188|gb|AAX77966.1| unknown protein [synthetic construct]
          Length = 521

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 81/214 (37%), Gaps = 17/214 (7%)

Query: 133 YARRFSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
                 I   AIT ++  +   +++++   + L            P  SA M       L
Sbjct: 24  MLEMLRITQQAITFDDVLLSPRYSNVLPHQVDLKTNITRDIQLNIPLVSAAMDTVTESRL 83

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITI 245
           AIA+ +          ++H    +         V    + + +    +K    + + + +
Sbjct: 84  AIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVIDPITIKQESSIKEIMQL 138

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLT 303
             E  F    VVD+  K+ GI+T  D    F KDL+   V  +M        + ED    
Sbjct: 139 AKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSIMTPREKLVTVPEDASQG 195

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + L +H I  L+VV++  + +G++   D+ R
Sbjct: 196 AIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 229



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 175 VSSIMTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 233


>gi|146293453|ref|YP_001183877.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
 gi|145565143|gb|ABP76078.1| cyclic nucleotide-binding protein [Shewanella putrefaciens CN-32]
          Length = 615

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                 ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 156 MSSDPIMIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDE-GKAIGMVTSTDILR 267



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P +I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL 335
            DL
Sbjct: 199 KDL 201


>gi|332711630|ref|ZP_08431561.1| putative signal-transduction protein [Lyngbya majuscula 3L]
 gi|332349608|gb|EGJ29217.1| putative signal-transduction protein [Lyngbya majuscula 3L]
          Length = 155

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 62/140 (44%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                 +V+   P+ + I I++E+    + VV+E  KL G+I+E D+             
Sbjct: 9   MTRDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLLWQETGVEPPVYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + ++L+     +  +VM  +P  I  D  L  A +L+++ +I  L 
Sbjct: 69  MFLDSVIYLENPARYDQELHKALGQTAGEVMTGHPMSIKPDQPLRKAAKLMQEKSIHHLP 128

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V D+ ++ IGI+   D++R 
Sbjct: 129 VTDEAEQVIGILSSGDIVRA 148



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 34/55 (61%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +V +VM ++P V+  +T +   ++++ + +IS L VV++  K +G++   DLL
Sbjct: 2   AKTVAEVMTRDPIVVQPETPIKEVIKIIAEQSISGLPVVNEAGKLVGVISETDLL 56



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +K   PL  A  ++ EK    + V DE +++ GI++ GDI R    +L  
Sbjct: 106 IKPDQPLRKAAKLMQEKSIHHLPVTDEAEQVIGILSSGDIVRAMAAELKN 155


>gi|120598469|ref|YP_963043.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
 gi|120558562|gb|ABM24489.1| cyclic nucleotide-binding protein [Shewanella sp. W3-18-1]
          Length = 615

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                 ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 156 MSSDPIMIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDE-GKAIGMVTSTDILR 267



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P +I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL 335
            DL
Sbjct: 199 KDL 201


>gi|331270377|ref|YP_004396869.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           BKT015925]
 gi|329126927|gb|AEB76872.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           BKT015925]
          Length = 484

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 41  NIPILSAGMDTVTESKMAIAVAREGGIG-----IIHKNMSIERQAMEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++++ R   V +  E  KL GIIT  DI   F  +    +++++
Sbjct: 96  DPFHLSPDNTVQDALDLMAKYRISGVPIT-EEGKLVGIITNRDI--AFETN-YEQAIKNI 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E+T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 152 MTSENLITAPENTTVEEAKEILKGHKIEKLPLVDKDNNLKGLITIKDI 199


>gi|71907266|ref|YP_284853.1| cyclic nucleotide-binding/CBS/putative nucleotidyltransferase
           [Dechloromonas aromatica RCB]
 gi|71846887|gb|AAZ46383.1| Cyclic nucleotide-binding:CBS:Protein of unknown function DUF294,
           nucleotidyltransferase putative [Dechloromonas aromatica
           RCB]
          Length = 646

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 46/201 (22%), Positives = 71/201 (35%), Gaps = 13/201 (6%)

Query: 140 PLIAITSENKSV---VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+ A+T+   S     A        LP E        +P  +          +A  L +S
Sbjct: 102 PIGAVTAGRPSTNVYTAVEDTFCYQLPAEDFLALMSSSPEFNLFCTKY----IASLLDQS 157

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R   +  F             + +        S   V    PL  A+  +S+   G + +
Sbjct: 158 RRQLQLQFAQR----ASEQQTLNSPLAGIGSRSPVTVSPDTPLRAALETMSQAGVGSLVI 213

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
             E +K  G+ T  D+  R    DL  T  +   M +NP +I E      AM  +  H I
Sbjct: 214 AGEDRKAVGVFTRTDLLDRVVLADLPLTTPIAQAMSQNPFMIEEHATAYDAMFAMATHGI 273

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             ++V D   K  G+V   DL
Sbjct: 274 RHVLVTDAEGKLTGVVSERDL 294



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   +      +  +  ++P  +  DT L  A++ + Q  +  L++  + +KA+G+    
Sbjct: 168 RASEQQTLNSPLAGIGSRSPVTVSPDTPLRAALETMSQAGVGSLVIAGEDRKAVGVFTRT 227

Query: 334 DLL 336
           DLL
Sbjct: 228 DLL 230


>gi|319399777|gb|EFV88025.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           FRI909]
          Length = 488

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E +KL GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPDESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K+        T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDDLITAPVGTTLDEAEAILQKHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|242243327|ref|ZP_04797772.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           W23144]
 gi|242233276|gb|EES35588.1| inositol-monophosphate dehydrogenase [Staphylococcus epidermidis
           W23144]
          Length = 488

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVKLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E +KL GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPDESVYEAEALMGKYRISGVPIVDNQEDRKLIGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K+        T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKDDLITAPVGTTLDEAEAILQKHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|255540203|ref|XP_002511166.1| conserved hypothetical protein [Ricinus communis]
 gi|223550281|gb|EEF51768.1| conserved hypothetical protein [Ricinus communis]
          Length = 545

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 11/140 (7%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F    PGG  G   V    +  +      V     + +A   ++ +R   + + D  
Sbjct: 38  RKSFASSRPGGLTGERTVKRLRLSKALT----VPETTTIQEACRRMAARRVDALLLTDSN 93

Query: 261 QKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             L GI+T+ DI  R   ++LN     V  VM +NP  +L DTL   A+Q + Q     L
Sbjct: 94  ALLCGILTDKDIATRVIARELNLEETPVSKVMTRNPVFVLSDTLAVEALQKMVQGKFRHL 153

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            VV++ +    ++  LD+ +
Sbjct: 154 PVVENGE----VIALLDIAK 169



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++     + E R     V+ +  K +GI+T  D + R   ++
Sbjct: 223 STILPENSKVVTVLPTETVLAVTKKMLESRSSSAVVIVDQ-KPRGILTSKDILMRVIAQN 281

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  ++   E VM  NP+    DT +  A+  +       L V+D     + +V  + +  
Sbjct: 282 LPSDSTLAEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVLDRDGNVVAVVDVIHITH 341

Query: 338 FGI 340
             +
Sbjct: 342 AAV 344


>gi|156039609|ref|XP_001586912.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980]
 gi|154697678|gb|EDN97416.1| hypothetical protein SS1G_11941 [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 680

 Score = 96.1 bits (238), Expect = 7e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 112 QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 172 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 215



 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
           +G     V +   + +A  ++ E     V V D G  + GI T  D+  R     L+   
Sbjct: 276 TGIPPTTVTVRTSVKEAAALMKENHTTAVLVQD-GGSITGIFTSKDVVLRVIAPGLDPSN 334

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SV  VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 335 CSVVRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNDQGEIVGMV---DVLKL 387


>gi|260893163|ref|YP_003239260.1| CBS domain containing protein [Ammonifex degensii KC4]
 gi|260865304|gb|ACX52410.1| CBS domain containing protein [Ammonifex degensii KC4]
          Length = 769

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 54/147 (36%), Gaps = 2/147 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            A    +     +  +         L    +        +  V     + +A  I+    
Sbjct: 279 AASAAIKGADPEEIKLKLLAWLNQQLRPPLTVGEIMTSPVKTVTPETSVAEAGQIMLRYG 338

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + VV EG +L GII+  D+ +     L    V+  M +    +     +  A  LL 
Sbjct: 339 HSGLPVV-EGGRLVGIISRRDVEKAKLSGLEHAPVKGYMSRQVVTVSPQVPVREAQALLV 397

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           QH+I  L VV +  + +GIV   D+L+
Sbjct: 398 QHDIGRLPVV-EGDRLVGIVSRTDILK 423



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L+V ++M    K +  +T +  A Q++ ++  S L VV +  + +GI+   D+ +  +
Sbjct: 308 LTVGEIMTSPVKTVTPETSVAEAGQIMLRYGHSGLPVV-EGGRLVGIISRRDVEKAKL 364



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +    A    +    +  V    P+ +A  +L +   G + VV EG +L GI++  DI +
Sbjct: 365 SGLEHAPVKGYMSRQVVTVSPQVPVREAQALLVQHDIGRLPVV-EGDRLVGIVSRTDILK 423

Query: 275 NFHKDLN 281
             H+D  
Sbjct: 424 TLHRDFR 430


>gi|92118059|ref|YP_577788.1| inosine 5'-monophosphate dehydrogenase [Nitrobacter hamburgensis
           X14]
 gi|91800953|gb|ABE63328.1| inosine-5'-monophosphate dehydrogenase [Nitrobacter hamburgensis
           X14]
          Length = 498

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 66/172 (38%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++              G+   +            +   
Sbjct: 46  NIPIMASAMDTVTEARMAIAMAQAGGIGVIH-RNFDVEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++++  F  + VV+ G      KL GI+T  D+            V +
Sbjct: 105 IGPDAMLSDALALMNDHGFSGIPVVNGGSATAPGKLVGILTNRDVRFATDP---RQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVD+  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQEEAKKMLHKHRIEKLLVVDEQYRCVGLITVKDMEKA 213


>gi|319426755|gb|ADV54829.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella putrefaciens 200]
          Length = 615

 Score = 96.1 bits (238), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                 ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  L
Sbjct: 156 MSSDPIMIDAHASVTQAALLMRNARVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGRL 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+  KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDE-GKAIGMVTSTDILR 267



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 2/63 (3%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P +I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSDPIMIDAHASVTQAALLMRNARVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL 335
            DL
Sbjct: 199 KDL 201


>gi|256831878|ref|YP_003160605.1| inosine-5'-monophosphate dehydrogenase [Jonesia denitrificans DSM
           20603]
 gi|256685409|gb|ACV08302.1| inosine-5'-monophosphate dehydrogenase [Jonesia denitrificans DSM
           20603]
          Length = 504

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 74/204 (36%), Gaps = 13/204 (6%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           +    +    D VL LP E +  P  +  TT     + +   L  A +++   +     +
Sbjct: 9   DPFGFLGLTYDDVLLLPNETDVIPSEVDTTTRLTKDITLSVPLVSAAMDTVTEARMAIAM 68

Query: 207 LHPGG------------KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
              GG            +   + +              V     + +   +  + R   +
Sbjct: 69  ARQGGIGIIHRNLSIDEQARNVDMVKRSESGMITDPVTVGPNATIEELDNLCGQYRVSGL 128

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQLLRQHN 313
            VVD+   L GIIT  D+     +   T +V DVM   P +  +  +    A  LL +H 
Sbjct: 129 PVVDDNNTLLGIITNRDLRFVKPEAYLTTTVRDVMTPMPLITGKVGIARDDAANLLAKHR 188

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VD+  +  G++   D ++
Sbjct: 189 IEKLPLVDEQGRLQGLITVKDFVK 212


>gi|189194755|ref|XP_001933716.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
 gi|187979280|gb|EDU45906.1| CBS and PB1 domain containing protein [Pyrenophora tritici-repentis
           Pt-1C-BFP]
          Length = 666

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++E++
Sbjct: 104 QIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEI 163

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+     GI+  
Sbjct: 164 MTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDI 207



 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
           +G     V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T
Sbjct: 268 TGLPPTTVSVRTSVREAAALMKEHHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPST 326

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SV  VM  +P     D  +  A++ +   +   L V+ D  + +G+V   D+L+ 
Sbjct: 327 CSVVRVMTPHPDFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMV---DVLKL 379



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 44/179 (24%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  +    V   ++M         K      DA+ ++  K F  + V+D
Sbjct: 139 FTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCA--KTDTSATDALDLMVRKGFRHLPVMD 196

Query: 259 EGQKLKGI--IT--EGDIFRNFHK------------------------------------ 278
           E   + GI  IT    D      +                                    
Sbjct: 197 ENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQAEMGSSQPAEIINYVEAIRQ 256

Query: 279 DLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  ++E V+    P  +   T +  A  L+++H+ + ++V D+     GI    D++
Sbjct: 257 KMSGPTLESVLTGLPPTTVSVRTSVREAAALMKEHHTTAVLVQDN-GSITGIFTSKDVV 314


>gi|172040076|ref|YP_001799790.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium urealyticum
           DSM 7109]
 gi|171851380|emb|CAQ04356.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium urealyticum
           DSM 7109]
          Length = 519

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 64/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH    +         V  S   +  
Sbjct: 63  NIPIASAAMDTVTEGRMAIAMARQGGIG-----VLHRNLSVEAQAEQVEIVKRSEAGMVT 117

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   I    R   + VVDE Q L GIIT  D+   F +D+N   V +V
Sbjct: 118 NPVTASPDMTIEEVDEICGRFRISGLPVVDEDQTLLGIITNRDMR--FERDINR-PVREV 174

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P V+ E       A++LL ++ +  L +VD   K  G++   D  +
Sbjct: 175 MTPMPLVVAEQGVSADAALRLLSENKVEKLPIVDGAGKLTGLITVKDFAK 224


>gi|126459004|ref|YP_001055282.1| CBS domain-containing protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248725|gb|ABO07816.1| CBS domain containing protein [Pyrobaculum calidifontis JCM 11548]
          Length = 688

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 58/114 (50%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LS 284
           +   +  +     L +AI ++++   G + VV E  KL G+++E DI +   K ++    
Sbjct: 576 APRELVTIAPDKSLKEAIDLMAKYNIGFLPVV-EDGKLVGVLSETDIVKAVAKGVDLGRP 634

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V +   K P V+ +   L  A +L+ ++NI  + +V +  K +G++   D+L+ 
Sbjct: 635 VAEFANK-PIVVDKSATLRDAAELMVKYNIRHIPIV-EDGKVVGVISVRDVLKA 686



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------FRNFHKDLN 281
               +    P+ +    L +     V V  EG K  GI+   ++            K + 
Sbjct: 509 KTSCIDAKAPVTEVFVALEQYNVRAVPVC-EGGKPVGIVEARELVNEALGLRSVLKKKVA 567

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +V D   +    I  D  L  A+ L+ ++NI  L VV +  K +G++   D+++ 
Sbjct: 568 LRFNVYDAAPRELVTIAPDKSLKEAIDLMAKYNIGFLPVV-EDGKLVGVLSETDIVKA 624



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   +V     L DA  ++ +     + +V E  K+ G+I+  D+ +   
Sbjct: 640 NKPIVVDKSATLRDAAELMVKYNIRHIPIV-EDGKVVGVISVRDVLKAIG 688


>gi|313126698|ref|YP_004036968.1| inosine-5'-monophosphate dehydrogenase [Halogeometricum borinquense
           DSM 11551]
 gi|312293063|gb|ADQ67523.1| inosine-5'-monophosphate dehydrogenase [Halogeometricum borinquense
           DSM 11551]
          Length = 499

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI +            VLH    +  +      V  + + +  
Sbjct: 53  NVPILSAAMDTVTESGMAIGMAREGGLG-----VLHRNMDIEAMVAEIERVKRADELVIR 107

Query: 233 ------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                  + G  + D   ++  +      VVDE   + GII+  DI        +   V 
Sbjct: 108 RENVVTARPGQTVRDVDEMMEREGVSGAPVVDEEDVVLGIISGTDIRPYLEVGESD-EVR 166

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M         D     A++L+  H I  + VVD+    +G+V    +L+
Sbjct: 167 EAMTDEVITAERDVTARDALELMYDHKIERVPVVDEEGHLVGLVTMQGILQ 217


>gi|115389224|ref|XP_001212117.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
 gi|114194513|gb|EAU36213.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
          Length = 668

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+        +    ++V ++
Sbjct: 119 QIKPNTTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKAREITVSEI 178

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 179 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 222



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
                V +   + +A  ++ E     + V D    + GI T  DI  R     L+  T S
Sbjct: 285 MPPTTVSVRTSVKEAAALMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPATCS 343

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 344 VVRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNEAGEIVGMV---DVLKL 394


>gi|71394085|gb|AAZ32124.1| CBS domain protein [uncultured euryarchaeote Alv-FOS5]
          Length = 156

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 57/140 (40%), Gaps = 34/140 (24%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
           V     +   I I+ +++   + VV+   KL G++T+GDI R+                 
Sbjct: 15  VHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIRSLDIPDFPTSAVSPPPFD 74

Query: 278 -------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              +   +  V DVM K+P  +  +  +  A  ++ + N+  L 
Sbjct: 75  FIERLIKVKMEEWDVERALEMWKSGKVSDVMTKDPASVHMNDDVEKAADIMLEKNVHRLP 134

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVDD  K +GIV  LDLL+ 
Sbjct: 135 VVDDDGKLVGIVTRLDLLKA 154



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 32/53 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM K+   + ++  +   + ++++  IS L VV++  K IG+V   D++R
Sbjct: 4   VKDVMTKDVVYVHDNEGIAKVIDIMKKRKISGLPVVNNSGKLIGVVTDGDIIR 56



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V +   +  A  I+ EK    + VVD+  KL GI+T  D+ +  
Sbjct: 112 VHMNDDVEKAADIMLEKNVHRLPVVDDDGKLVGIVTRLDLLKAL 155


>gi|313893298|ref|ZP_07826873.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
           158 str. F0412]
 gi|313442194|gb|EFR60611.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. oral taxon
           158 str. F0412]
          Length = 484

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 64/171 (37%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGGLG-----VIHKNMSIEEQAHEVDKVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  I+ + +   V +  E  KL GIIT  D+   F  DL T  + D 
Sbjct: 98  DPIFLSPQNLLSDAAEIMEKYKISGVPIT-EHGKLVGIITNRDMR--FETDL-TRQIGDC 153

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+      E T L  A  +L +H I  L +VDD     G++   D+ + 
Sbjct: 154 MTKDSLVTAPEGTSLEEAKAILSEHRIEKLPLVDDDGNLKGLITIKDIEKA 204


>gi|330932518|ref|XP_003303808.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
 gi|311319951|gb|EFQ88097.1| hypothetical protein PTT_16169 [Pyrenophora teres f. teres 0-1]
          Length = 666

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++E++
Sbjct: 104 QIKPSTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKARDVTIEEI 163

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+     GI+  
Sbjct: 164 MTKNPLCAKTDTSATDALDLMVRKGFRHLPVMDENHDISGILDI 207



 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
           +G     V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T
Sbjct: 268 TGLPPTTVSVRTSVREAAALMKEHHTTAVLVQD-NGSITGIFTSKDVVLRVIAAGLDPST 326

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SV  VM  +P     D  +  A++ +   +   L V+ D  + +G+V   D+L+ 
Sbjct: 327 CSVVRVMTPHPDFAPMDMSIQSALRKMHDGHYLNLPVMSDAGEIVGMV---DVLKL 379



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 44/179 (24%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  +    V   ++M         K      DA+ ++  K F  + V+D
Sbjct: 139 FTAKDLAFRVVGAGIKARDVTIEEIMTKNPLCA--KTDTSATDALDLMVRKGFRHLPVMD 196

Query: 259 EGQKLKGI--IT--EGDIFRNFHK------------------------------------ 278
           E   + GI  IT    D      +                                    
Sbjct: 197 ENHDISGILDITKCFYDAMEKLERAYSSSRKLYDALEGVQAEMGSSQPAEIINYVEAIRQ 256

Query: 279 DLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  ++E V+    P  +   T +  A  L+++H+ + ++V D+     GI    D++
Sbjct: 257 KMSGPTLESVLTGLPPTTVSVRTSVREAAALMKEHHTTAVLVQDN-GSITGIFTSKDVV 314


>gi|283783531|ref|YP_003374285.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis
           409-05]
 gi|298252613|ref|ZP_06976407.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis 5-1]
 gi|283441810|gb|ADB14276.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis
           409-05]
 gi|297532977|gb|EFH71861.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis 5-1]
          Length = 514

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 63/173 (36%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             PT SA M       +AIA+          RN S +D        +   + +       
Sbjct: 56  KVPTISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 107

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L D   +        + VVD   +L GIIT  D+     +D + L V
Sbjct: 108 MITDPLTVHPDATLADLDKLCGRFHISGLPVVDSENRLVGIITNRDMRFIASEDYDRLKV 167

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +DVM + N      +     A +LL  + I  L +VD   K  G++   D ++
Sbjct: 168 KDVMTRENLVTGPSNISKEDAHRLLADNKIEKLPLVDAEGKLTGLITVKDFVK 220


>gi|138893688|ref|YP_001124141.1| inosine 5'-monophosphate dehydrogenase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196251176|ref|ZP_03149852.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
 gi|134265201|gb|ABO65396.1| Inosine-monophosphate dehydrogenase [Geobacillus
           thermodenitrificans NG80-2]
 gi|196209317|gb|EDY04100.1| inosine-5'-monophosphate dehydrogenase [Geobacillus sp. G11MC16]
          Length = 488

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSERGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V +V+  E QKL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPDHQVYDAEHLMGKYRISGVPIVNNAEEQKLVGIITNRDLR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VM K N       T L  A ++L+QH +  L +VD+     G++   D+
Sbjct: 155 EVMTKENLITAPVGTTLEEAEKILQQHKVEKLPLVDENGILKGLITIKDI 204


>gi|218509889|ref|ZP_03507767.1| inositol-5'-monophosphate dehydrogenase [Rhizobium etli Brasil 5]
          Length = 226

 Score = 95.7 bits (237), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPTEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     L +A+ ++       + VV++  +L GI+T  D+            + ++M K 
Sbjct: 105 IGPEAKLAEALGLMKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKD 161

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N   + E+     A +LL  H I  L+VVD   + +G++   D+
Sbjct: 162 NLVTVKENVDQQEAKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 205


>gi|15827114|ref|NP_301377.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium leprae TN]
 gi|221229592|ref|YP_002503008.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium leprae
           Br4923]
 gi|2497359|sp|Q49729|IMDH_MYCLE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|466944|gb|AAC43232.1| guaB2 [Mycobacterium leprae]
 gi|13092662|emb|CAC29895.1| putative inosine-5'-monophosphate dehydrogenase [Mycobacterium
           leprae]
 gi|219932699|emb|CAR70480.1| putative inosine-5'-monophosphate dehydrogenase [Mycobacterium
           leprae Br4923]
          Length = 529

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 49/129 (37%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G + G +                 +    L     + +  R   + VVD+   L GIIT 
Sbjct: 113 GEQAGQVETVKRSEAGMVTDPVTCRPDNTLAQVGALCARFRISGLPVVDDSGALAGIITN 172

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            D+     +   +  V +VM K P     E      A+ LLR++ I  L VVD   +  G
Sbjct: 173 RDMRFEVDQ---SKQVAEVMTKTPLITAAEGVSADAALGLLRRNKIEKLPVVDGHGRLTG 229

Query: 329 IVHFLDLLR 337
           ++   D ++
Sbjct: 230 LITVKDFVK 238


>gi|257054544|ref|YP_003132376.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis
           DSM 43017]
 gi|256584416|gb|ACU95549.1| inosine-5'-monophosphate dehydrogenase [Saccharomonospora viridis
           DSM 43017]
          Length = 514

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 44/202 (21%), Positives = 70/202 (34%), Gaps = 22/202 (10%)

Query: 152 VACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRN 198
           +    D VL LP E +  P G               P  SA M       +AIA+     
Sbjct: 28  LGLTFDDVLLLPAESDVIPSGVDTSTNLTRNIRLNIPLVSAAMDTVTEARMAIAMARQGG 87

Query: 199 FS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
               + +  +      +  +    S ++              L +   + +  R   V V
Sbjct: 88  LGVLQRNLPIEEQAQAVEVVKRSESGMV---TDPVTCSPDDTLAEVDELCARFRISGVPV 144

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNIS 315
            D    L GIIT  D+         +  V +VM K P V  +       A+ LLR+H + 
Sbjct: 145 TDASGTLVGIITNRDMRFEVD---YSKPVREVMTKAPLVTAQVGVTADAALGLLRRHKVE 201

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L +VD   K  G++   D ++
Sbjct: 202 KLPIVDGDGKLRGLITVKDFVK 223


>gi|187933700|ref|YP_001884623.1| inosine 5'-monophosphate dehydrogenase [Clostridium botulinum B
           str. Eklund 17B]
 gi|187721853|gb|ACD23074.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum B
           str. Eklund 17B]
          Length = 484

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 65/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSAAMDTVTQSKMAIAMAREGGIG-----IIHKNMSIEQQAKEVDKVKRQENGIIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ + R   V +  E  KL GI+T  D+   F  D  T  + DV
Sbjct: 96  DPIFLSKENTLQDAENLMGQYRISGVPIT-ENGKLVGILTNRDV--TFETDF-TKKISDV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A ++L++H I  L +VD      G++   D+ +  
Sbjct: 152 MTKENLITAPENTSIDEAKEILKKHKIEKLPLVDGEGNLKGLITIKDIDKAK 203


>gi|255647096|gb|ACU24016.1| unknown [Glycine max]
          Length = 222

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 59/157 (37%), Gaps = 29/157 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      +D       + +VK    + +A+  L   R   + V+DE   L G++++ D+ 
Sbjct: 61  GNGTYTVADFATKKQDLHVVKTTTTVDEALEALVNYRISGLPVIDEVWNLVGVVSDYDLL 120

Query: 274 -----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                                        +      N   V D+M   P V+ E T L  
Sbjct: 121 AIDSISGGPQSDANLFPNVDSTWKTFNELQKLLSKTNGQVVGDLMTPTPLVVHESTSLEE 180

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           A +LL +     L VVDD  K +G++   ++++  ++
Sbjct: 181 AARLLLETKYRRLPVVDDDGKLVGLITRGNIVKAALL 217


>gi|222479636|ref|YP_002565873.1| inosine-5'-monophosphate dehydrogenase [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222452538|gb|ACM56803.1| inosine-5'-monophosphate dehydrogenase [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 499

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 62/183 (33%), Gaps = 12/183 (6%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT----- 215
            L            P  SA M       LAIA+            VLH    +       
Sbjct: 42  DLSARVSKNVELTVPVLSAAMDTVTESDLAIAMAREGGLG-----VLHRNMTVEETAEEV 96

Query: 216 -LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                A +++   + +  V     + +A  ++  +      VVDE   + GII+  DI  
Sbjct: 97  ERIKRAHELVIRREDVVTVSPDDTVREADAVMERQGVSGAPVVDEDDAVLGIISGTDIRP 156

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                 +   V + M        E+     A++L+  H I  + +VD     +G+V    
Sbjct: 157 YLEVGEDDA-VSEAMTDEVITAPENVEAREALELMYDHKIERVPIVDGDDGLVGLVTMQG 215

Query: 335 LLR 337
           +L+
Sbjct: 216 ILQ 218


>gi|150399099|ref|YP_001322866.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150011802|gb|ABR54254.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 411

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHK 278
             V         V     ++DA   +         ++DE   + GIIT+ DI R     K
Sbjct: 61  QQVEDLMFRPYCVNQTTSVMDATFEMINSGQRVAPIIDEKNNMVGIITDYDIMRCAAKSK 120

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + V  +M K+P  I  D  +  A  L+ ++NI  L+V++      G+V   D+++ 
Sbjct: 121 LLRDVLVNKIMSKSPITIDSDESIGKARSLMMKYNIGRLVVLNKNGNPTGMVTEDDIVKK 180



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 47/134 (35%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   +     +  A +++ +   G + V+++     G++TE DI +   K 
Sbjct: 125 VLVNKIMSKSPITIDSDESIGKARSLMMKYNIGRLVVLNKNGNPTGMVTEDDIVKKVFKP 184

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V +               +M         D  +    +L+   ++  + V     
Sbjct: 185 KTKMTVGELKGDKMPRMAQPVSMIMNSPIISAELDNSIADVAKLMENQDVRGVPVF-KDG 243

Query: 325 KAIGIVHFLDLLRF 338
              GIV  LD+L++
Sbjct: 244 SLRGIVTRLDILKY 257



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 6/120 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +  +   +  V    P++ AI I+  KRF  + V  E +    ++T  D+     
Sbjct: 1   MKEQVIDIATKDVVTVAPETPILKAIGIMENKRFHNLIVERENEIY--LVTMYDL---LL 55

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     VED+M + P  + + T +  A   +      V  ++D+    +GI+   D++R
Sbjct: 56  ANSVNQQVEDLMFR-PYCVNQTTSVMDATFEMINSGQRVAPIIDEKNNMVGIITDYDIMR 114


>gi|150402528|ref|YP_001329822.1| hypothetical protein MmarC7_0604 [Methanococcus maripaludis C7]
 gi|150033558|gb|ABR65671.1| protein of unknown function DUF39 [Methanococcus maripaludis C7]
          Length = 513

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 2/111 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +  +   + +A  IL E     + ++DE  KL GIIT  DI +   +D +  S+ +
Sbjct: 396 KPAVVGSLKMSITEASRILIENNINHLPIIDENGKLSGIITSWDIAKAMAQDKH--SISE 453

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M         D  + +A + + ++NIS L VVD   K +G+V   D+ + 
Sbjct: 454 IMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSAEDISKL 504



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K   V      +T A ++L ++NI+ L ++D+  K  GI+   D+ + 
Sbjct: 390 VKDILSKPAVVGSLKMSITEASRILIENNINHLPIIDENGKLSGIITSWDIAKA 443



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 23/69 (33%), Gaps = 2/69 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            +          +    +  +V       +  A   +S      + VVD   K+ G+++ 
Sbjct: 439 DIAKAMAQDKHSISEIMTTYIVSATPDETIDMAARKMSRNNISGLPVVDSNNKVLGVVSA 498

Query: 270 GDIFRNFHK 278
            DI +   +
Sbjct: 499 EDISKLIGR 507


>gi|150402185|ref|YP_001329479.1| signal transduction protein [Methanococcus maripaludis C7]
 gi|150033215|gb|ABR65328.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 412

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 2/120 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             V         V++   ++DA   +         V++E  KL GIIT+ D+ R   +  
Sbjct: 61  QQVEDLMFKPYCVRMNTQVLDAAFEMINSGQRVAPVINENDKLIGIITDYDVMRCASQSE 120

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  + ++ +M K+P  I  D  +  A  L+ ++NI  L+V+D     +G+V   D+++ 
Sbjct: 121 LLKDVKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDTEGNPMGMVTEDDIVKK 180



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   + I   +  A +++ +   G + V+D      G++TE DI +   K 
Sbjct: 125 VKIDKIMTKSPVTIDIDESIGKARSLMMKYNIGRLIVLDTEGNPMGMVTEDDIVKKVFKP 184

Query: 280 LNTLSVEDV-------------MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V ++             MI N       ED  +     L+ + +I  + +     
Sbjct: 185 KTKMTVGELTGDKMPRMAQPVSMIVNKPLITADEDDSIAAVADLMEKQDIRGVPIF-KND 243

Query: 325 KAIGIVHFLDLLRF 338
              GIV  LD+L++
Sbjct: 244 ILRGIVTRLDILKY 257



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    +  +   +  V    P+  A+ I+  ++F  + +  +      ++T  D+     
Sbjct: 1   MKEQVIDIATKDVVTVNPDTPISKAVGIMENRKFHNLIIEKDDDIY--LVTMHDL---LL 55

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     VED+M K P  +  +T +  A   +      V  V+++  K IGI+   D++R
Sbjct: 56  GNSVHQQVEDLMFK-PYCVRMNTQVLDAAFEMINSGQRVAPVINENDKLIGIITDYDVMR 114


>gi|329768558|ref|ZP_08260045.1| inosine-5'-monophosphate dehydrogenase [Gemella haemolysans M341]
 gi|328836599|gb|EGF86258.1| inosine-5'-monophosphate dehydrogenase [Gemella haemolysans M341]
          Length = 487

 Score = 95.7 bits (237), Expect = 9e-18,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 67/186 (36%), Gaps = 15/186 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLKVSLTEKIKLSVPIISAAMDTVTEHKMAIAMAREGGIG-----VIHKNMTIEEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + +A  ++ + R   V +V+  +  K+ GIIT  D+ 
Sbjct: 85  VRKVKRSESGVITDPFFLTPDSLVYEAENLMQQYRISGVPIVNNEDDMKVVGIITNRDMR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D+    + +VM K +     E T L  A  +LR H I  L++ D+  K  G++  
Sbjct: 145 FLTDFDI---KISEVMTKEHLITAPEKTTLEEASVILRSHKIEKLILTDESGKLTGLITI 201

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 202 KDIEKL 207


>gi|153004389|ref|YP_001378714.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp.
           Fw109-5]
 gi|152027962|gb|ABS25730.1| inosine-5'-monophosphate dehydrogenase [Anaeromyxobacter sp.
           Fw109-5]
          Length = 487

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 81/207 (39%), Gaps = 22/207 (10%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCP-------------HGLAPTTSAIMQLAIGDALA 190
           + + +   +A   D VL LP E +  P                 P  S+ M       +A
Sbjct: 1   MLNRDDLRLALTFDDVLLLPSESDVLPKAVETSTRLSRNIQINIPIVSSAMDTVTEARMA 60

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           IA+       F   +  V     ++  +    S V+        ++   P+  A+ ++ E
Sbjct: 61  IAMASVGGLGFVHKNLTVEQQAAEVHKVKKYESAVV---GDPITIEPNAPIHRAVALMRE 117

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                + VV +  +L GI+T  D+   F K+L    VE VM +      E   +  A  L
Sbjct: 118 NGISGIPVV-QKGRLVGILTNRDLR--FEKNL-EQRVEQVMTRELVTAREGVTIEEAKDL 173

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L +H I  L+VV++  +  G++   D+
Sbjct: 174 LHRHRIEKLLVVNEAFELRGLITIKDI 200


>gi|281412866|ref|YP_003346945.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga naphthophila RKU-10]
 gi|281373969|gb|ADA67531.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga naphthophila RKU-10]
          Length = 321

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 5/135 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +L  +F            +  V     L+    I+  KR   V VVD+ +++ GI++  D
Sbjct: 8   RLQAIFQDVRVSEFMNPDVIYVTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLED 67

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I +         SVE  M KN   + E   L  A+++  ++      VVDD +K +GIV 
Sbjct: 68  IIKALEGSYIKDSVEKRMTKNVVCLKETDTLQDAVKIFEKYGYGRFPVVDDEEKLVGIVT 127

Query: 332 FLDLL-----RFGII 341
             D++     + GI+
Sbjct: 128 KHDIIYFLLAKLGIM 142



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L   ++  S       ++  +K    L DA+ I  +  +G   VVD+ +KL GI+T+ 
Sbjct: 70  KALEGSYIKDSVEKRMTKNVVCLKETDTLQDAVKIFEKYGYGRFPVVDDEEKLVGIVTKH 129

Query: 271 DI 272
           DI
Sbjct: 130 DI 131


>gi|222529971|ref|YP_002573853.1| RpiR family transcriptional regulator [Caldicellulosiruptor bescii
           DSM 6725]
 gi|222456818|gb|ACM61080.1| transcriptional regulator, RpiR family [Caldicellulosiruptor bescii
           DSM 6725]
          Length = 280

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 68/179 (37%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S  +   + I +    +  ++  ++         A+E +   K R+   G+G SG I 
Sbjct: 89  EDSVNEIKQKVIQSTIDAIRDIDKLIE---DSTIEKAIEIMANAK-RIFFFGVGASGAIA 144

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  + +   +         +T  D ++ +S SG S E+   +  A+    
Sbjct: 145 KDAFHKFLRLGINTIYCSDSHIMSIMCSHMTEKDAVLAISHSGESREIIDAIELAKENKA 204

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +I+ TS   S +A  +D+V       +          S I+Q  I D L ++L+    
Sbjct: 205 KVISFTSYPNSTLAKLSDVVFL--SATKETKFRSDAMVSRIVQCVIIDILYVSLVLKLG 261


>gi|206901430|ref|YP_002250654.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
 gi|206740533|gb|ACI19591.1| acetoin utilization AcuB protein [Dictyoglomus thermophilum H-6-12]
          Length = 214

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 14/127 (11%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------- 274
           M    +   V     +++A  I+   +   + V D+  KL GI+TE D+           
Sbjct: 5   MRMTRNPISVSPDTSILEAWKIMQNSQIRRLLVRDK-GKLVGIVTERDLRSVSPSQATSL 63

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +  L  L V+D M  NP  +  D  +  A  ++R + IS L V+ +  + +GI+ 
Sbjct: 64  SIFEINYLLEKLKVKDAMTPNPITVDADAPIEEAALIMRDNKISALPVI-ENGEVVGIIT 122

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 123 ESDIFRA 129



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +   V    P+ +A  I+ + +   + V+ E  ++ GIITE DIFR F + L  
Sbjct: 81  MTPNPITVDADAPIEEAALIMRDNKISALPVI-ENGEVVGIITESDIFRAFIEMLGD 136


>gi|296419865|ref|XP_002839512.1| hypothetical protein [Tuber melanosporum Mel28]
 gi|295635673|emb|CAZ83703.1| unnamed protein product [Tuber melanosporum]
          Length = 642

 Score = 95.7 bits (237), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  I++ KR  CV V D+  ++ GI T  D+  R     +N   +++  +
Sbjct: 106 QIKPNTTVAEAAQIMAAKREDCVLVTDDEDRISGIFTAKDLAFRVVGAGVNARDVTIAQI 165

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 166 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 209



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 7/114 (6%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
           +   +V +   + DA  ++ E     V V D    + GI T  D+  R     L+    S
Sbjct: 272 NPPTVVSVRTTVKDAAAMMKENHTTAVLVQD-SGSITGIFTSKDVVLRVIAAGLDPANCS 330

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 331 VVRVMTPHPDFAPMDMSIQAALRKMHDGHYLNLPVMNEAAEIVGMV---DVLKL 381



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 53/238 (22%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSEN 202
           + +   VA    + L   +  +  P+      + IM     D + +   E R    F+  
Sbjct: 85  ARHTRKVAPGTVMALRPSQALQIKPNTTVAEAAQIMAAKREDCVLVTDDEDRISGIFTAK 144

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D      G  +    V  + +M         +      DA+ ++  K F  + V+DE Q 
Sbjct: 145 DLAFRVVGAGVNARDVTIAQIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMDENQD 202

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKN------------------------------ 292
           + GI+   DI + F++ +  L       +                               
Sbjct: 203 ISGIL---DITKCFYEAMEKLERAYASSRKLYDALEGVQSELGSSQPQQIIHYVEALRQK 259

Query: 293 --------------PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                         P V+   T +  A  ++++++ + ++V D      GI    D++
Sbjct: 260 MSGPDLQSVLDGNPPTVVSVRTTVKDAAAMMKENHTTAVLVQD-SGSITGIFTSKDVV 316


>gi|18976693|ref|NP_578050.1| related to inosine monophosphate dehydrogenase [Pyrococcus furiosus
           DSM 3638]
 gi|18892271|gb|AAL80445.1| related to inosine monophosphate dehydrogenase [Pyrococcus furiosus
           DSM 3638]
          Length = 392

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE-GDIFRNF 276
              + V       P+VK    L  A  ++ E     + V +   ++ G+I++   + R  
Sbjct: 64  PTKAKVRDVYKPAPVVKPTDDLSHAAKLMLETDLRSLPVGENKAEIIGVISDLALLERVV 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     VE+ M K+   +  D  +  A+  +R H IS + VVD+  K  G+V   DL+
Sbjct: 124 AEEFGKRKVEEFMTKDVITLTPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHDLI 183



 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 15/139 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +   F            +  +     +  A+  + +     + VVDE  KL+G++T  D+
Sbjct: 123 VAEEFGKRKVEEFMTKDVITLTPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHDL 182

Query: 273 FRNFHKDLNTLSVEDV---------------MIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              F K        ++               MI+    IL D  +  A+  ++ +NI  L
Sbjct: 183 IIRFIKPRFRAQAGELAGEKIPPFSMKLREAMIRGVITILPDATIREAVATMKDNNIDGL 242

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +VVD+  K +GI+   DLL
Sbjct: 243 VVVDENNKVVGILTVKDLL 261



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 3/100 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHKDLNTLSVEDVMIK 291
           + I  PL +AI I  ++    + V D G   KG++T +  I  +   D     V DV   
Sbjct: 17  IDINAPLSEAIGIFEKEDPDLILVFD-GNVYKGVLTQDLIIKSHLKWDPTKAKVRDVYKP 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            P V+     L+ A +L+ + ++  L V ++  + IG++ 
Sbjct: 76  AP-VVKPTDDLSHAAKLMLETDLRSLPVGENKAEIIGVIS 114


>gi|75676331|ref|YP_318752.1| inositol-5-monophosphate dehydrogenase [Nitrobacter winogradskyi
           Nb-255]
 gi|74421201|gb|ABA05400.1| inosine-5'-monophosphate dehydrogenase [Nitrobacter winogradskyi
           Nb-255]
          Length = 498

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 65/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++              G+   +            +   
Sbjct: 46  NIPIMASAMDTVTEARMAIAMAQAGGLGVIH-RNFDVEGQAAQVRQVKKFESGMVVNPLT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++S+  F  + VV  G      +L GI+T  D+            V +
Sbjct: 105 IGPDAMLSDALALMSDHGFSGIPVVAGGSGAAPGRLVGILTNRDVRFATDP---RQKVSE 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L +H I  L+VVDD  + +G++   D+ + 
Sbjct: 162 LMTHENLVTVREGVSQEEAKRMLHKHRIEKLLVVDDQYRCVGLITVKDMEKA 213


>gi|289451124|gb|ADC94039.1| KdsD [Leptospira interrogans serovar Grippotyphosa]
          Length = 125

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 56/114 (49%), Gaps = 6/114 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
             DS P++K    L +A+  + +   G   +VDE  KL G++T+GDI R      K  + 
Sbjct: 3   KPDSFPVLKETIILKEALETMGKFNLGIACIVDEDSKLLGLVTDGDIRRKLLKVQKPFSA 62

Query: 283 LSVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           L V+D     IK+P  I  D  L   + L+   ++  L VVD   + IG++H  
Sbjct: 63  LFVDDALEHCIKSPVCISADAKLIDGVNLMGAKHVWDLPVVDSNHRLIGLLHLH 116


>gi|258516240|ref|YP_003192462.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779945|gb|ACV63839.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 485

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIA+            V+H    +    V    V  S      
Sbjct: 43  SIPLMSAGMDTVTESRLAIAIAREGGIG-----VIHKNMSIKRQAVEVDRVKRSEHGVIS 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A+ ++   R   V V D+  KL GI+T  D+   F K+     V  V
Sbjct: 98  DPIFLSPTDSIQNALVLMERYRISGVPVTDDN-KLVGILTNRDLR--FEKNF-EQKVGAV 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     E T L  A  +L+ + +  L +VD+     G++   D+ +  
Sbjct: 154 MTMENLITAPEGTTLEEAKDILQHYKVEKLPIVDEEFNLRGLITIKDIEKAK 205


>gi|76802330|ref|YP_327338.1| IMP dehydrogenase 1 [Natronomonas pharaonis DSM 2160]
 gi|76558195|emb|CAI49783.1| IMP dehydrogenase 1/ CBS domain protein [Natronomonas pharaonis DSM
           2160]
          Length = 493

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI +            VLH    +        +V  + + I  
Sbjct: 49  NIPVISAAMDTVTEAELAIEMARQGGLG-----VLHRNMSVEETAQHVEEVKRADELIIR 103

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   ++  K      VVD+   + GII+  DI        +  SV++ 
Sbjct: 104 DVVTASPDQTVREVDAMMERKGVSGAPVVDDDDTVLGIISGTDIRPYLEVGEHD-SVQEA 162

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M        E+     A++L+ +H I  + +VDD  +  G+V        G++
Sbjct: 163 MTDEVITATEEVSPREALELMYEHKIERVPIVDDENRLTGLVTM-----AGVL 210


>gi|330994634|ref|ZP_08318557.1| Inosine-5'-monophosphate dehydrogenase [Gluconacetobacter sp.
           SXCC-1]
 gi|329758275|gb|EGG74796.1| Inosine-5'-monophosphate dehydrogenase [Gluconacetobacter sp.
           SXCC-1]
          Length = 500

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D++AIA+ ++         V+H    +         V      + +
Sbjct: 53  NIPLISSAMDTVTEDSMAIAMAQNGGLG-----VIHKNLTVEQQAEQVRRVKRFESGMVV 107

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     L +    +S      + VV+ E  +L GI+T  D+            V +
Sbjct: 108 NPVTVYPDQTLAEVNATMSRHGISGLPVVERETNRLVGILTNRDVRFATDP---AQRVYE 164

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   +  +     A QLL +H I  L+VVDD  + IG++   D+ R 
Sbjct: 165 LMTRENLVTVRNNADRDQARQLLHRHRIEKLLVVDDEDRCIGLITVKDMDRA 216


>gi|157150588|ref|YP_001449330.1| inosine 5'-monophosphate dehydrogenase [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|262281652|ref|ZP_06059421.1| inositol-5-monophosphate dehydrogenase [Streptococcus sp.
           2_1_36FAA]
 gi|157075382|gb|ABV10065.1| inosine-5'-monophosphate dehydrogenase [Streptococcus gordonii str.
           Challis substr. CH1]
 gi|262262106|gb|EEY80803.1| inositol-5-monophosphate dehydrogenase [Streptococcus sp.
           2_1_36FAA]
          Length = 493

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDFNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLETAERILQEHRIEKLPLVDEDGRLSGLITIKDI 206


>gi|218248686|ref|YP_002374057.1| CBS domain-containing protein [Cyanothece sp. PCC 8801]
 gi|257061751|ref|YP_003139639.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
 gi|218169164|gb|ACK67901.1| CBS domain containing protein [Cyanothece sp. PCC 8801]
 gi|256591917|gb|ACV02804.1| CBS domain containing protein [Cyanothece sp. PCC 8802]
          Length = 153

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V    PL +AI IL+EKR   + VVD+  KL G+I+E D+             
Sbjct: 9   MTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLMWQETGVEPPPYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + K+++     +V +VM  +P  I     L  A Q++ +  I  L 
Sbjct: 69  MILDSVIYLQNPARYEKEIHKALGQTVGEVMSNHPISIKSSQSLREAAQIMHEKKIRRLP 128

Query: 319 VVDDCQK-AIGIVHFLDLLR 337
           VVD+  K  IGI+   D++R
Sbjct: 129 VVDETGKQVIGILTQGDIIR 148



 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 20/52 (38%), Positives = 30/52 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM  N   +   T L+ A+++L +  IS L VVDD  K +G++   DL+
Sbjct: 5   VADVMTPNAITVTRQTPLSEAIRILAEKRISGLPVVDDSGKLVGVISETDLM 56



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKD 279
             +    +K    L +A  I+ EK+   + VVDE  K + GI+T+GDI R+  K 
Sbjct: 99  MSNHPISIKSSQSLREAAQIMHEKKIRRLPVVDETGKQVIGILTQGDIIRSMAKG 153


>gi|169337992|ref|ZP_02620682.2| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum C
           str. Eklund]
 gi|169296116|gb|EDS78249.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum C
           str. Eklund]
          Length = 487

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 44  NIPVLSAGMDTVTESKMAIAVAREGGIG-----IIHKNMSIERQAMEVDRVKRQENGVIT 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++++ R   V +  E  KL GIIT  DI   F  +  T  ++++
Sbjct: 99  DPFHLAPENTVQDALDLMAKYRISGVPIT-EEGKLVGIITNRDI--AFETN-YTQPIKNI 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E+T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 155 MTSENLITAAENTTVEEAKEILKGHKIEKLPLVDKENNLKGLITIKDI 202


>gi|116493788|ref|YP_805522.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei ATCC 334]
 gi|191637030|ref|YP_001986196.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus casei BL23]
 gi|227534579|ref|ZP_03964628.1| IMP dehydrogenase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239631043|ref|ZP_04674074.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|301065364|ref|YP_003787387.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei str. Zhang]
 gi|116103938|gb|ABJ69080.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus casei ATCC
           334]
 gi|190711332|emb|CAQ65338.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus casei BL23]
 gi|227187828|gb|EEI67895.1| IMP dehydrogenase [Lactobacillus paracasei subsp. paracasei ATCC
           25302]
 gi|239527326|gb|EEQ66327.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus paracasei
           subsp. paracasei 8700:2]
 gi|300437771|gb|ADK17537.1| IMP dehydrogenase/GMP reductase [Lactobacillus casei str. Zhang]
 gi|327381057|gb|AEA52533.1| hypothetical protein LC2W_0197 [Lactobacillus casei LC2W]
 gi|327384232|gb|AEA55706.1| hypothetical protein LCBD_0206 [Lactobacillus casei BD-II]
          Length = 495

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLADNLKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMSIEAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIF 273
              V  S + + +         P+ DA  ++ + R   V +V+    +KL GIIT  D+ 
Sbjct: 87  VLKVKRSENGVIVDPFFLTADKPVSDAEDLMKKYRISGVPIVNNTTDRKLTGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D  ++ ++ VM K         T +  A  +L+   I  L ++D   +  G++  
Sbjct: 147 YV---DDKSVLIDTVMTKEGLVTAPAGTSIEDAEAILQSRKIEKLPLIDKEGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|321255198|ref|XP_003193342.1| hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
 gi|317459812|gb|ADV21555.1| Hypothetical protein CGB_D1880W [Cryptococcus gattii WM276]
          Length = 803

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V  G  + DA  + + KR  CV VVDE + L GI T  D+         D  + +V  +M
Sbjct: 193 VPEGMSVADASQLCAAKRADCVLVVDEEEGLSGIFTAKDLAFRVTAEGLDPRSTNVAQIM 252

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            KNP V  + T  T A+QL+       L V ++    +G++  
Sbjct: 253 TKNPMVTRDTTNATEALQLMVSRGFRHLPVCNEDGDVVGLLDI 295



 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 21/135 (15%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---------------KLKGI 266
            V+ +  + P V     + +A  ++ E+R   V V++                  K+ GI
Sbjct: 358 TVIDTRSAPPTVTPRTTVREAARLMKERRTTAVCVMEANAGTSAVSGVSGGNVIPKIAGI 417

Query: 267 ITEGDI-FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            T  DI  R     L+    SV  VM  +P       ++  A++ +   +   L VV+  
Sbjct: 418 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTAPPTMVVQDALKKMHNGHYLNLPVVEAD 477

Query: 324 QKAIGIVHFLDLLRF 338
            + IGIV   D+L+ 
Sbjct: 478 GRLIGIV---DVLKL 489



 Score = 36.0 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 22/69 (31%), Gaps = 2/69 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D  +      L         VM              + DA+  +    +  + VV+
Sbjct: 418 FTSKDIVLRVIAAGLDASRCSVVRVMTPHPDTA--PPTMVVQDALKKMHNGHYLNLPVVE 475

Query: 259 EGQKLKGII 267
              +L GI+
Sbjct: 476 ADGRLIGIV 484


>gi|314935156|ref|ZP_07842509.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
           subsp. hominis C80]
 gi|313656491|gb|EFS20230.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
           subsp. hominis C80]
          Length = 488

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +V  +E + L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVITNPFFLTPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V+   +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKENLITAPVGTTLDEAEAILQKHKIEKLPLVEK-GRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|317509285|ref|ZP_07966905.1| inosine-5'-monophosphate dehydrogenase [Segniliparus rugosus ATCC
           BAA-974]
 gi|316252341|gb|EFV11791.1| inosine-5'-monophosphate dehydrogenase [Segniliparus rugosus ATCC
           BAA-974]
          Length = 509

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 7/134 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   + T+    + ++         +    L +   + +  R   + VV    +L 
Sbjct: 91  SASEQAQAVETVKRSEAGMV---TDPVTCRPDMTLAEVDALCARYRISGLPVVSNDGRLV 147

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           GIIT  D+     ++    +V++VM K P     +      A+ +LR+H I  L VV   
Sbjct: 148 GIITNRDMRFEVDQN---RTVDEVMTKQPLVTAPQGVTAAAALGILRRHKIEKLPVVSGD 204

Query: 324 QKAIGIVHFLDLLR 337
               G++   D  +
Sbjct: 205 GSLTGLITVKDFAK 218



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 30/72 (41%), Gaps = 6/72 (8%)

Query: 270 GDIFRNFHKDLNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           G + RN        +VE V      M+ +P     D  L     L  ++ IS L VV + 
Sbjct: 84  GVLHRNLSASEQAQAVETVKRSEAGMVTDPVTCRPDMTLAEVDALCARYRISGLPVVSND 143

Query: 324 QKAIGIVHFLDL 335
            + +GI+   D+
Sbjct: 144 GRLVGIITNRDM 155


>gi|326472832|gb|EGD96841.1| CBS and PB1 domain-containing protein [Trichophyton tonsurans CBS
           112818]
          Length = 659

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 10/191 (5%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           S   S +    +  +      +    G + T S   Q       AI      + S+  F 
Sbjct: 22  SNASSGIPRKVEHPIPPSVASD---IGASSTLSTSRQKQSKRDEAIRRKMEADLSKKKF- 77

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +P     T       V+    S  L +K    + +A  +++ KR  CV V D+  ++ 
Sbjct: 78  --NPSKARHTRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIA 135

Query: 265 GIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI T  D+  R     +    +++ ++M KNP     DT  T A+ L+ +     L V+D
Sbjct: 136 GIFTAKDLAYRVVGAGIRARDVTIVEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMD 195

Query: 322 DCQKAIGIVHF 332
           + Q   GI+  
Sbjct: 196 ENQDISGILDI 206



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     + V D    + GI T  D+  R     L+  T SV
Sbjct: 270 PPTTVSVRTSVKEAAALMKENHTTALLVQD-QGSITGIFTSKDVVLRVIAPGLDPATCSV 328

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 329 VRVMTPHPDFAPTDMSIQAALRKMHDGHYLNLPVMNESGEIVGMV---DVLKL 378


>gi|171679826|ref|XP_001904859.1| hypothetical protein [Podospora anserina S mat+]
 gi|170939539|emb|CAP64766.1| unnamed protein product [Podospora anserina S mat+]
          Length = 677

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     L    +++ ++
Sbjct: 107 QIKPATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKAANVTIAEI 166

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 167 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 210



 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T SV
Sbjct: 274 PPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPATCSV 332

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 333 VRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 382



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 41/239 (17%), Positives = 77/239 (32%), Gaps = 49/239 (20%)

Query: 144 ITSENKSVVACHADIVLTLPKEP--ESCPHGLAPTTSAIMQLAIGDALAIALLESRN--- 198
           +TS  +         VL L   P  +  P       + +M     D + +   + R    
Sbjct: 82  LTSRARHSRKAPPGTVLALKPSPALQIKPATTVSEAAQLMAAKREDCVLVTDDDERIAGI 141

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L    V  +++M         +      DA+ ++  K F  + V+D
Sbjct: 142 FTAKDLAFRVVGAGLKAANVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 199

Query: 259 EGQKLKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV--------- 288
           E Q + G+  IT+                    D       +L T   + +         
Sbjct: 200 ENQDISGVLDITKCFYEAMEKLERAYSSSRRLYDALEGVQSELGTSQPQQIIQYVEALRS 259

Query: 289 -MI----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M             P  +   T +  A QL+++++ + ++V D      GI    D++
Sbjct: 260 KMSGPTLESVLNGIPPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVV 317


>gi|289618931|emb|CBI54536.1| unnamed protein product [Sordaria macrospora]
          Length = 681

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     L  NT+++ ++
Sbjct: 105 QIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGAGLKSNTVTIAEI 164

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 165 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 208



 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T SV
Sbjct: 272 PPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPATCSV 330

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     +  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 331 VRVMTPHPDFAPMEMTIQAALRKMHDGHYLNLPVMNDAGEIVGMV---DVLKL 380



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 39/242 (16%), Positives = 76/242 (31%), Gaps = 55/242 (22%)

Query: 144 ITSENKSVVACHADIVLTLPKEP--ESCPHGLAPTTSAIMQLAIGDALAIALLESRN--- 198
           +TS  +         VL L   P  +          + +M     D + +   + R    
Sbjct: 80  LTSRARHTRKAPPGTVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGI 139

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L +  V  +++M         +      DA+ ++  K F  + V+D
Sbjct: 140 FTAKDLAFRVVGAGLKSNTVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 197

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-------------------------- 292
           E Q + GI+   DI + F+  +  L       +                           
Sbjct: 198 ENQDISGIL---DITKCFYDAMEKLERAYASSRRLYDALEGVQSELGTSQPQQIIQYVEA 254

Query: 293 ------------------PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                             P  +   T +  A QL+++++ + ++V D      GI    D
Sbjct: 255 LRSKMSGPTLESVLNGIPPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKD 313

Query: 335 LL 336
           ++
Sbjct: 314 VV 315


>gi|154301338|ref|XP_001551082.1| hypothetical protein BC1G_10339 [Botryotinia fuckeliana B05.10]
 gi|150856240|gb|EDN31432.1| hypothetical protein BC1G_10339 [Botryotinia fuckeliana B05.10]
          Length = 622

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R     +    +++ ++
Sbjct: 54  QIKPNTTVAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGIKAANITIAEI 113

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 114 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 157



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D G  + GI T  D+  R     L+    SV
Sbjct: 221 PPTTVTVRTSVKEAAALMKENHTTAVLVQD-GGSITGIFTSKDVVLRVIAPGLDPSNCSV 279

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 280 VRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNDQGEIVGMV---DVLKL 329


>gi|86606513|ref|YP_475276.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
 gi|86555055|gb|ABD00013.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
          Length = 903

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  +L       + VVD   +L G+I+  DI    H       V
Sbjct: 325 MSSPVRTIRPEVTIQEAQRVLLRYGHSGLVVVDGQGRLVGVISRRDIDIALHHGFGHAPV 384

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  + K +  DT L    +L+ Q +I  L V+    + +GIV   D+LR
Sbjct: 385 KGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL-QDGQLVGIVTRTDVLR 435



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 34/66 (51%), Gaps = 1/66 (1%)

Query: 271 DIFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+ +   + +   ++ +D+M    + I  +  +  A ++L ++  S L+VVD   + +G+
Sbjct: 306 DLSQAVKERIPPPVTAKDLMSSPVRTIRPEVTIQEAQRVLLRYGHSGLVVVDGQGRLVGV 365

Query: 330 VHFLDL 335
           +   D+
Sbjct: 366 ISRRDI 371



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +    PL +   ++ +   G + V+ +  +L GI+T  D
Sbjct: 374 ALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL-QDGQLVGIVTRTD 432

Query: 272 IFRNFHK 278
           + R+ H+
Sbjct: 433 VLRHLHQ 439


>gi|300709724|ref|YP_003735538.1| peptidase M50 [Halalkalicoccus jeotgali B3]
 gi|299123407|gb|ADJ13746.1| peptidase M50 [Halalkalicoccus jeotgali B3]
          Length = 409

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 2/120 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              D+M S + +  V     + D +  +  +R     V+ E  +L GI+T  D       
Sbjct: 250 RVEDIMTSDEEVDSVSPETSVADLLERMFSERHTGYPVM-ENGRLAGIVTLSDAREVEPV 308

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +V+DVM    + I  D     A+  ++Q  I  L+V++D  + +G++   DL+  
Sbjct: 309 ERDAYTVDDVMTTELETIAPDAEAMEALNRMQQLRIGRLLVLEDD-RLVGLISRTDLMTA 367


>gi|23097465|ref|NP_690931.1| inosine-5'-monophosphate dehydrogenase [Oceanobacillus iheyensis
           HTE831]
 gi|22775688|dbj|BAC11966.1| inosine-5'-monophosphate dehydrogenase [Oceanobacillus iheyensis
           HTE831]
          Length = 489

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E  S     +P  SA M       +AIA+          F V+H    +      
Sbjct: 30  VDLSVELTSTLKLKSPFISAGMDTVTEAEMAIAMARQGG-----FGVIHKNMSIEDQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +V+  E QKL GI+T  D+ 
Sbjct: 85  VDKVKRSESGVITNPFFLTPEHQVYDAEHLMGKFRISGVPIVNNIEEQKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++S+ +VM  +N       T L  A +LL+Q+ I  L +VDD     G++  
Sbjct: 145 --FIQD-YSISISEVMTSENLVTAPVGTTLQEAEKLLQQYKIEKLPLVDDRNILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|332669587|ref|YP_004452595.1| inosine-5'-monophosphate dehydrogenase [Cellulomonas fimi ATCC 484]
 gi|332338625|gb|AEE45208.1| inosine-5'-monophosphate dehydrogenase [Cellulomonas fimi ATCC 484]
          Length = 504

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            +LH    +         V  S      
Sbjct: 48  RVPLLSAAMDTVTESRMAIAMARQGGVG-----ILHRNLSIADQAHQVDRVKRSESGMVS 102

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +   +    R   + VVD+ ++L GIIT  D+      D  T  V +V
Sbjct: 103 DPVTVSPDATLAELDRLCGTYRVSGLPVVDDDRRLLGIITNRDLRFVPAADFETRRVREV 162

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P V          A  LL +H I  L +VD+     G++   D ++
Sbjct: 163 MTAMPLVTAPVGIDRDEAAALLAKHKIEKLPLVDERGVLRGLITVKDFVK 212


>gi|159794788|pdb|2EF7|A Chain A, Crystal Structure Of St2348, A Hypothetical Protein With
           Cbs Domains From Sulfolobus Tokodaii Strain7
 gi|159794789|pdb|2EF7|B Chain B, Crystal Structure Of St2348, A Hypothetical Protein With
           Cbs Domains From Sulfolobus Tokodaii Strain7
          Length = 133

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 40/107 (37%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     L D   + +EK  G V VVD G K  GIITE DI +   K  +     E+    
Sbjct: 17  VTKDAKLNDIAKVXTEKNIGSVIVVD-GNKPVGIITERDIVKAIGKGKSLETKAEEFXTA 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I ED+ +T A+ L RQ NI  L VVDD     GI+   D+ R 
Sbjct: 76  SLITIREDSPITGALALXRQFNIRHLPVVDDKGNLKGIISIRDITRA 122



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++        + +D  L    ++  + NI  ++VVD   K +GI+   D+++ 
Sbjct: 6   VKEYXKTQVISVTKDAKLNDIAKVXTEKNIGSVIVVD-GNKPVGIITERDIVKA 58



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           ++   P+  A+ +  +     + VVD+   LKGII+  DI R       T
Sbjct: 80  IREDSPITGALALXRQFNIRHLPVVDDKGNLKGIISIRDITRAIDDXFET 129


>gi|24374385|ref|NP_718428.1| CBS domain-containing protein [Shewanella oneidensis MR-1]
 gi|24348950|gb|AAN55872.1|AE015724_5 CBS domain protein [Shewanella oneidensis MR-1]
          Length = 620

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              S   +     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSSPITIDAHATVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLASGLDGQI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D+      KAIG+V   D+LR
Sbjct: 215 AVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDILR 272



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M  +P  I     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLATTSRISTLMSSSPITIDAHATVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL 335
            DL
Sbjct: 199 KDL 201



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIFR 274
            +       S   +     + +A+ ++SE     + ++DE      K  G++T  DI R
Sbjct: 214 IAVHQAMTTSPISISSNALIFEAMLLMSEHNIHHLPIIDEQNTDEVKAIGMVTSTDILR 272


>gi|304314337|ref|YP_003849484.1| transcriptional regulator [Methanothermobacter marburgensis str.
           Marburg]
 gi|302587796|gb|ADL58171.1| predicted transcriptional regulator [Methanothermobacter
           marburgensis str. Marburg]
          Length = 293

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 56/122 (45%), Gaps = 1/122 (0%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 +    +   +  +     + DA   LS        +V E  ++KGI+T  DI  
Sbjct: 166 RSIPKRTVEEVATHELVTLTHDISVKDAAVKLSSLGIEGAPIV-EDDEVKGIVTLSDITA 224

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +  +    L V ++M KN   +  + +++ A++++ +HNI  L+V D   K +GI+   D
Sbjct: 225 SIAEGTENLPVSEIMSKNIITVKPEMMISDAIEIMNKHNIGRLIVTDSEGKLLGIITRTD 284

Query: 335 LL 336
           +L
Sbjct: 285 IL 286


>gi|254447850|ref|ZP_05061315.1| cyclic nucleotide binding protein [gamma proteobacterium HTCC5015]
 gi|198262630|gb|EDY86910.1| cyclic nucleotide binding protein [gamma proteobacterium HTCC5015]
          Length = 615

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 62/141 (43%), Gaps = 4/141 (2%)

Query: 199 FSENDFYVLHPGGKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F  N+  +L    ++GT                 +V     + +    +S+       V 
Sbjct: 126 FEVNEHSILEQATQVGTDDMTTVPVTELIKTEPLVVTPDTTVAECAVRISDHYIAAAVVQ 185

Query: 258 DEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           DE  +L GI+T+ D+  +   K L     V ++M   P+V+ +   L   M ++ ++NI 
Sbjct: 186 DEQGRLLGIVTDNDLRAKVVAKRLPYDTPVGEIMSTEPQVMDDHAYLHEVMLVMLRNNIH 245

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            + +VD+  + +G+V  LD++
Sbjct: 246 HVPIVDE-NRVLGVVSLLDMV 265



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+ T+ V +++   P V+  DT +      +  H I+  +V D+  + +GIV   DL R 
Sbjct: 144 DMTTVPVTELIKTEPLVVTPDTTVAECAVRISDHYIAAAVVQDEQGRLLGIVTDNDL-RA 202

Query: 339 GII 341
            ++
Sbjct: 203 KVV 205


>gi|56708374|ref|YP_170270.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110670844|ref|YP_667401.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis FSC198]
 gi|118497257|ref|YP_898307.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           novicida U112]
 gi|134302359|ref|YP_001122328.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|194323559|ref|ZP_03057336.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida FTE]
 gi|208779050|ref|ZP_03246396.1| inosine-5'-monophosphate dehydrogenase [Francisella novicida FTG]
 gi|224457504|ref|ZP_03665977.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|254370997|ref|ZP_04987000.1| IMP dehydrogenase [Francisella tularensis subsp. tularensis FSC033]
 gi|254372630|ref|ZP_04988119.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida GA99-3549]
 gi|254374092|ref|ZP_04989574.1| IMP dehydrogenase [Francisella novicida GA99-3548]
 gi|254875197|ref|ZP_05247907.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|56604866|emb|CAG45950.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis SCHU S4]
 gi|110321177|emb|CAL09333.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis FSC198]
 gi|118423163|gb|ABK89553.1| IMP dehydrogenase/GMP reductase [Francisella novicida U112]
 gi|134050136|gb|ABO47207.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis WY96-3418]
 gi|151569238|gb|EDN34892.1| IMP dehydrogenase [Francisella tularensis subsp. tularensis FSC033]
 gi|151570357|gb|EDN36011.1| inosine-5-monophosphate dehydrogenase [Francisella novicida
           GA99-3549]
 gi|151571812|gb|EDN37466.1| IMP dehydrogenase [Francisella novicida GA99-3548]
 gi|194322414|gb|EDX19895.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. novicida FTE]
 gi|208744850|gb|EDZ91148.1| inosine-5'-monophosphate dehydrogenase [Francisella novicida FTG]
 gi|254841196|gb|EET19632.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis MA00-2987]
 gi|282159993|gb|ADA79384.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. tularensis NE061598]
          Length = 486

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+  K+ GI+T  D    F KDL+   V  +
Sbjct: 96  DPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|228474196|ref|ZP_04058933.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
           SK119]
 gi|228271891|gb|EEK13228.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus hominis
           SK119]
          Length = 488

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +V  +E + L GIIT  D+ 
Sbjct: 85  VQKVKRSENGVITNPFFLIPDESVYEAEALMGKYRISGVPIVKDEESRTLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K N       T L  A  +L++H I  L +V+   +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKENLITAPVGTTLDEAEAILQKHKIEKLPLVEK-GRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|217972889|ref|YP_002357640.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS223]
 gi|217498024|gb|ACK46217.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS223]
          Length = 615

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +  ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSAPIVIDAHASVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGHI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M   P VI     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL----LRFGI 340
            DL    L  G+
Sbjct: 199 KDLRNRVLAAGL 210



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++D+  K  G++T  DI R
Sbjct: 213 HIAVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267


>gi|297622495|ref|YP_003703929.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Truepera radiovictrix DSM 17093]
 gi|297163675|gb|ADI13386.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Truepera radiovictrix DSM 17093]
          Length = 619

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 66/189 (34%), Gaps = 18/189 (9%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
           P     G A TT+  ++  +   L   +  +       F       +   L      +  
Sbjct: 84  PSLLSDGRAKTTATAIEDTLLYDLPGGVFRALMEESEAFAQFFAEARTLRLQRALRGLHR 143

Query: 226 SGDSIPL--------------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           S +   L              V     +  A  ++ E     V VV E  ++ GI+T+ D
Sbjct: 144 STELPLLNVRVSDLALRPPVTVTPEVSVQRAAEVMYEHLISSV-VVLEEGRVVGILTDRD 202

Query: 272 IF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +  R   +    +  V +VM   P+ + +      A+  + + NI  L V     + +G+
Sbjct: 203 LRGRVVAQGRPYSTPVREVMTPAPRTVDQGAYAFEALLTMTRFNIHHLPVT-GGGRLLGL 261

Query: 330 VHFLDLLRF 338
           V   DL+R 
Sbjct: 262 VSSTDLMRL 270


>gi|46123863|ref|XP_386485.1| hypothetical protein FG06309.1 [Gibberella zeae PH-1]
          Length = 680

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+           + +++ ++
Sbjct: 107 QIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGAKASAVTIAEI 166

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 167 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 210



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E R   V V D    + GI T  D+  R     L+    SV
Sbjct: 274 PPTTVSVRTSVREAAQLMKENRTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPANCSV 332

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  L  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 333 VRVMTPHPDFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 382



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/239 (15%), Positives = 75/239 (31%), Gaps = 49/239 (20%)

Query: 144 ITSENKSVVACHADIVLTLPKEP--ESCPHGLAPTTSAIMQLAIGDALAIALLESRN--- 198
           +TS  +         VL L      +  P+      + +M     D + +   + R    
Sbjct: 82  LTSRARHSRKAPPGTVLALKPSQALQIKPNTTVSEAAQLMAAKREDCVLVTDDDDRIAGI 141

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G       V  +++M         +      DA+ ++  K F  + V+D
Sbjct: 142 FTAKDLAFRVVGAGAKASAVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 199

Query: 259 EGQKLKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV--------- 288
           E Q + G+  IT+                    D       +L +   + +         
Sbjct: 200 ENQDISGVLDITKCFYDAMEKLERAYSSSRKLYDALEGVQSELGSTQPQQIIQYVEALRS 259

Query: 289 -MI----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M             P  +   T +  A QL++++  + ++V D      GI    D++
Sbjct: 260 KMSGPTLETVLNGVPPTTVSVRTSVREAAQLMKENRTTAVLVQD-QGAITGIFTSKDVV 317


>gi|328676746|gb|AEB27616.1| Inosine-5'-monophosphate dehydrogenase [Francisella cf. novicida
           Fx1]
          Length = 486

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+  K+ GI+T  D    F KDL+   V  +
Sbjct: 96  DPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|89256767|ref|YP_514129.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica LVS]
 gi|115315158|ref|YP_763881.1| IMP dehydrogenase [Francisella tularensis subsp. holarctica OSU18]
 gi|156502929|ref|YP_001428994.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|167010908|ref|ZP_02275839.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FSC200]
 gi|254368058|ref|ZP_04984078.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica 257]
 gi|254369658|ref|ZP_04985668.1| hypothetical protein FTAG_00976 [Francisella tularensis subsp.
           holarctica FSC022]
 gi|290954455|ref|ZP_06559076.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica URFT1]
 gi|295312117|ref|ZP_06802928.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica URFT1]
 gi|89144598|emb|CAJ79917.1| Inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica LVS]
 gi|115130057|gb|ABI83244.1| IMP dehydrogenase [Francisella tularensis subsp. holarctica OSU18]
 gi|134253868|gb|EBA52962.1| inosine-5-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica 257]
 gi|156253532|gb|ABU62038.1| inosine-5'-monophosphate dehydrogenase [Francisella tularensis
           subsp. holarctica FTNF002-00]
 gi|157122617|gb|EDO66746.1| hypothetical protein FTAG_00976 [Francisella tularensis subsp.
           holarctica FSC022]
          Length = 486

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+  K+ GI+T  D    F KDL+   V  +
Sbjct: 96  DPITIKQESSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|312136464|ref|YP_004003801.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224183|gb|ADP77039.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 188

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 5/106 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVMI 290
                + +A  I+S+KR G + + D      G++TE DI  +   KDL  + + V ++M 
Sbjct: 21  PPNISVAEAAAIMSKKRVGSIIIKDNSG-PIGLVTESDIIRKVVAKDLKASEVKVSEIMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           KN   I  ++ +  A  L+ ++NI  L VV      +GI+   D++
Sbjct: 80  KNLITIEPESEIREAAHLMAKNNIRRLPVV-KNGVLVGIITSTDIM 124



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++V D M  N      +  +  A  ++ +  +  +++ D+    IG+V   D++R 
Sbjct: 6   KITVRDAMTPNVITAPPNISVAEAAAIMSKKRVGSIIIKDNSG-PIGLVTESDIIRK 61



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 3/74 (4%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E+D         L    V  S++M    ++  ++    + +A  ++++     + VV +
Sbjct: 54  TESDIIRKVVAKDLKASEVKVSEIM--TKNLITIEPESEIREAAHLMAKNNIRRLPVV-K 110

Query: 260 GQKLKGIITEGDIF 273
              L GIIT  DI 
Sbjct: 111 NGVLVGIITSTDIM 124


>gi|251780929|ref|ZP_04823849.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
 gi|243085244|gb|EES51134.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum E1
           str. 'BoNT E Beluga']
          Length = 484

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSAAMDTVTQSKMAIAMAREGGIG-----IIHKNMSIEQQAKEVDKVKRQENGIIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++ + R   V +  E  KL GI+T  D+   F  D +   + +V
Sbjct: 96  DPIFLSKENTLQDAENLMGQYRISGVPIT-ENGKLVGILTNRDV--TFETDFSK-KISEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N     E+T +  A ++L++H I  L +VD  +   G++   D+ +  
Sbjct: 152 MTKENLITAPENTSIDEAKEILKKHKIEKLPLVDKDRNLKGLITIKDIDKAK 203


>gi|229917448|ref|YP_002886094.1| inosine-5'-monophosphate dehydrogenase [Exiguobacterium sp. AT1b]
 gi|229468877|gb|ACQ70649.1| inosine-5'-monophosphate dehydrogenase [Exiguobacterium sp. AT1b]
          Length = 487

 Score = 95.4 bits (236), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 43  NIPIISAGMDTVTEAPMAIAMARQGGLG-----VIHKNMSMEMQAEHVDRVKRSENGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++S+ R   V +V+  E ++L GI+T  D+   F KD +T+ ++
Sbjct: 98  NPFYLTPDRQVYDAEYLMSKYRISGVPIVNSEEERQLIGILTNRDLR--FIKDYSTV-IK 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM   N       T L  A ++L QH I  L +VD+     G++   D+
Sbjct: 155 DVMTTENLITAKVGTSLEEAERILHQHRIEKLPLVDENGVLKGLITTKDI 204


>gi|326381884|ref|ZP_08203577.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL
           B-59395]
 gi|326199310|gb|EGD56491.1| inosine 5'-monophosphate dehydrogenase [Gordonia neofelifaecis NRRL
           B-59395]
          Length = 488

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 69/199 (34%), Gaps = 16/199 (8%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAI--------MQLAIGDALAIALLESRNFSEND 203
           +    D VL LP   +  P+ +  ++           +  +  D +  A +         
Sbjct: 2   LGLTFDDVLLLPAASDVVPNAVDTSSRLTREISLRVPLVSSAMDTVTEARMAIAMARAGG 61

Query: 204 FYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             VLH    +         V  S      +         L +   + +  R   + VVD 
Sbjct: 62  MGVLHRNLSIEAQAAAVETVKRSEAGMVTNPVTCLPTNTLAEVDAMCARYRISGLPVVDA 121

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLM 318
              L GIIT  D+   F  D  +  V +VM   P     E      A+ LLR+H I  L 
Sbjct: 122 AGDLVGIITNRDMR--FEHD-QSRPVSEVMTPAPLITASEGVSADAALGLLRRHKIEKLP 178

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           +VD   +  G++   D ++
Sbjct: 179 IVDGNGRLTGLITVKDFVK 197


>gi|298290960|ref|YP_003692899.1| inosine-5'-monophosphate dehydrogenase [Starkeya novella DSM 506]
 gi|296927471|gb|ADH88280.1| inosine-5'-monophosphate dehydrogenase [Starkeya novella DSM 506]
          Length = 496

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   + +          +   
Sbjct: 44  NIPILSSAMDTVTEWRLAIAMAQAGGLGVIH-RNLDPEVQAEHVRMVKKYESGMVVNPVT 102

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++       + VV+ G      KL GI+T  D+    +       V +
Sbjct: 103 IHPDQTLADALALMKNHSISGIPVVERGPNGRGGKLVGILTNRDVRFATNP---AQPVSE 159

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K     + E      A +LL Q+ I  L+VVDD  + +G++   D+ + 
Sbjct: 160 LMTKERLITVREGVEQAEAKRLLHQYRIEKLLVVDDEGRCVGLITVKDMEKA 211


>gi|166366612|ref|YP_001658885.1| chloride channel protein [Microcystis aeruginosa NIES-843]
 gi|166088985|dbj|BAG03693.1| probable chloride channel protein [Microcystis aeruginosa NIES-843]
          Length = 875

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + ++    PL + + I+S        VV E  +L GI T+ D+ +   K+ +   +
Sbjct: 455 MQSQVEILPADLPLGEVVKIMSRSHHRGFPVV-EQGRLLGIFTQSDLDKWRSKN-SQTVL 512

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++M  NP  +     LT  + LL ++ +S L V D  QK +GI+   D++R
Sbjct: 513 REIMTPNPITVAPQAALTDVLFLLNRYQLSRLPVTD-GQKLVGIITRTDIIR 563



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K  +             +   V     L D + +L+  +   + V D GQKL GIIT  D
Sbjct: 502 KWRSKNSQTVLREIMTPNPITVAPQAALTDVLFLLNRYQLSRLPVTD-GQKLVGIITRTD 560

Query: 272 IFR 274
           I R
Sbjct: 561 IIR 563



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  LS  DVM    +++  D  L   ++++ + +     VV +  + +GI    DL
Sbjct: 446 LAHLSAMDVMQSQVEILPADLPLGEVVKIMSRSHHRGFPVV-EQGRLLGIFTQSDL 500


>gi|153001189|ref|YP_001366870.1| signal-transduction protein [Shewanella baltica OS185]
 gi|304411956|ref|ZP_07393567.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS183]
 gi|307303276|ref|ZP_07583031.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica BA175]
 gi|151365807|gb|ABS08807.1| putative signal-transduction protein with CBS domains [Shewanella
           baltica OS185]
 gi|304349816|gb|EFM14223.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS183]
 gi|306913636|gb|EFN44058.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica BA175]
          Length = 615

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +  ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSAPIVIDAHASVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAAGLDGHI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M   P VI     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL----LRFGI 340
            DL    L  G+
Sbjct: 199 KDLRNRVLAAGL 210



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++D+  K  G++T  DI R
Sbjct: 213 HIAVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267


>gi|222106765|ref|YP_002547556.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium vitis S4]
 gi|221737944|gb|ACM38840.1| inosine-5`-monophosphate dehydrogenase [Agrobacterium vitis S4]
          Length = 532

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 8/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 82  SLPILSSAMDTVTESRLAIAMAQAGGLGVIH-RNLTPTEQAEEVRQVKKFESGMVINPVT 140

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +     L +A+ ++       + VV+ G +   L GI+T  D+        ++  + ++M
Sbjct: 141 IHPDATLAEALGLMKAHGISGIPVVENGGRPGRLVGILTNRDVRFASD---HSQKIHELM 197

Query: 290 IK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + N   + +      A +LL  H I  L+VVD+  + +G++   D+
Sbjct: 198 TRDNLITVKDGVEQQEAKRLLHSHRIEKLLVVDNEGRCVGLITVKDI 244


>gi|169831364|ref|YP_001717346.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638208|gb|ACA59714.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 873

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +A  I+       + VV     L G+I+  D+ +    +L    V+  M KN
Sbjct: 321 VSPEITVSEANRIMLRYGHRGMPVV-SDGSLVGVISRRDVEKALRHNLGHAPVKAYMSKN 379

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +  DT +T    ++ ++NI  L VVD+    +GIV   D+L+
Sbjct: 380 VMTVSRDTPVTEVQAVMIENNIGRLPVVDN-GYLVGIVSRTDILK 423



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D+M    K +  +  ++ A +++ ++    + VV D    +G++   D+ + 
Sbjct: 310 AGDIMTSPVKSVSPEITVSEANRIMLRYGHRGMPVVSD-GSLVGVISRRDVEKA 362



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 1/71 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L      A    +   ++  V    P+ +   ++ E   G + VVD    L GI++  
Sbjct: 361 KALRHNLGHAPVKAYMSKNVMTVSRDTPVTEVQAVMIENNIGRLPVVD-NGYLVGIVSRT 419

Query: 271 DIFRNFHKDLN 281
           DI +  H    
Sbjct: 420 DILKTLHPQFK 430


>gi|94987033|ref|YP_594966.1| IMP dehydrogenase/GMP reductase [Lawsonia intracellularis
           PHE/MN1-00]
 gi|94731282|emb|CAJ54645.1| IMP dehydrogenase/GMP reductase [Lawsonia intracellularis
           PHE/MN1-00]
          Length = 491

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++  +         ++H    +    +    V  S + + L
Sbjct: 46  SIPFISAAMDTVTESAMAISMARAGGIG-----IIHKNMSISRQKMEVEKVKKSENGMIL 100

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    +  A+ ++   R   + VV + + L GI+T  D+   F +DL+   V +V
Sbjct: 101 DPVTVRPEDTVEHALELMQLYRVSGLPVV-QDKTLIGIVTNRDVR--FVEDLSNTFVHEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   +   T L  A   L  H I  L+VV++  +  G++   D+
Sbjct: 158 MTRENLVTVPVGTTLDEAKHHLHMHRIEKLLVVNEAGQLAGLLTMKDI 205


>gi|323700721|ref|ZP_08112633.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio sp. ND132]
 gi|323460653|gb|EGB16518.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           ND132]
          Length = 484

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 66/165 (40%), Gaps = 8/165 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  +R+      +      +                S P+
Sbjct: 41  NIPLISAAMDTVTESRMAISM--ARHGGAGVIHKNMSVREQAREIDRVKKSESGMISDPI 98

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI- 290
            V     L     I+SE R   + VV +G  L GIIT  DI   F +D +   V ++M  
Sbjct: 99  TVHPDDDLGKVKAIMSEYRISGLPVV-KGDHLVGIITNRDIR--FVQD-DKSMVSELMTS 154

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++   + E      A + L QH I  L+VVD+  +  G++   D+
Sbjct: 155 RDLVTVPEGIDNEEAKRKLHQHRIEKLLVVDEENRLKGLITIKDI 199


>gi|290958079|ref|YP_003489261.1| IMP dehydrogenase/ GMP reductase [Streptomyces scabiei 87.22]
 gi|260647605|emb|CBG70710.1| IMP dehydrogenase/ GMP reductase [Streptomyces scabiei 87.22]
          Length = 500

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 46/187 (24%), Positives = 67/187 (35%), Gaps = 13/187 (6%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              +          H   P  SA M       +AIA+            VLH    +   
Sbjct: 33  PNAVDTSSRISRNVHVNIPLLSAAMDKVTESRMAIAMARQGGVG-----VLHRNLSVEDQ 87

Query: 217 FVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                 V  S          V     L +A  + ++ R   V V D  +KL GI+T  D+
Sbjct: 88  VNQVDLVKRSESGMVTDPITVHPDATLAEADALCAKFRISGVPVTDGNKKLLGIVTNRDM 147

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              F  D  +  V +VM   P V  +       AM+LLR+H I  L +VDD     G++ 
Sbjct: 148 --AFETD-RSRQVREVMTPMPLVTGQVGISGADAMELLRRHKIEKLPLVDDAGILKGLIT 204

Query: 332 FLDLLRF 338
             D ++ 
Sbjct: 205 VKDFVKA 211


>gi|229550857|ref|ZP_04439582.1| IMP dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|258507244|ref|YP_003169995.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus rhamnosus GG]
 gi|258538431|ref|YP_003172930.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus rhamnosus Lc
           705]
 gi|229315682|gb|EEN81655.1| IMP dehydrogenase [Lactobacillus rhamnosus LMS2-1]
 gi|257147171|emb|CAR86144.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus rhamnosus GG]
 gi|257150107|emb|CAR89079.1| Inosine-5'-monophosphate dehydrogenase [Lactobacillus rhamnosus Lc
           705]
 gi|259648610|dbj|BAI40772.1| inosine-5'-monophosphate dehydrogenase [Lactobacillus rhamnosus GG]
          Length = 495

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLADNLKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMSIEAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIF 273
              V  S + + +         P+ DA  ++ + R   V +V+    +KL GIIT  D+ 
Sbjct: 87  VLKVKRSENGVIVDPFFLTADKPVSDAEALMKKYRISGVPIVNNTTDRKLTGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D  ++ ++ VM K         T +  A  +L+   I  L ++D   +  G++  
Sbjct: 147 YV---DDKSVLIDTVMTKEGLVTAPAGTSIEDAEAILQARKIEKLPLIDKQGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|86610318|ref|YP_479080.1| polyA polymerase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
 gi|86558860|gb|ABD03817.1| polyA polymerase family protein [Synechococcus sp. JA-2-3B'a(2-13)]
          Length = 908

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                 L    +   +    +        +  ++    + +A  +L       + VVD  
Sbjct: 303 AQVMAALRQAVQ-ERIPPPVTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDAQ 361

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+I+  DI    H       V+  M  + K +  DT L    +L+ Q +I  L V+
Sbjct: 362 GRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL 421

Query: 321 DDCQKAIGIVHFLDLLR 337
               + +GIV   D+LR
Sbjct: 422 -QDGQLVGIVTRTDVLR 437



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +    PL +   ++ +   G + V+ +  +L GI+T  D
Sbjct: 376 ALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL-QDGQLVGIVTRTD 434

Query: 272 IFRNFHK 278
           + R+ H+
Sbjct: 435 VLRHLHE 441


>gi|86605414|ref|YP_474177.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
 gi|86553956|gb|ABC98914.1| polyA polymerase family protein [Synechococcus sp. JA-3-3Ab]
          Length = 908

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                 L    +   +    +        +  ++    + +A  +L       + VVD  
Sbjct: 303 AQVMAALRQAVQ-ERIPPPVTAKDLMSAPVRTIRPEITIDEAQRVLLRYGHSGLVVVDAQ 361

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +L G+I+  DI    H       V+  M  + K +  DT L    +L+ Q +I  L V+
Sbjct: 362 GRLVGVISRRDIDIALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL 421

Query: 321 DDCQKAIGIVHFLDLLR 337
               + +GIV   D+LR
Sbjct: 422 -QDGQLVGIVTRTDVLR 437



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 29/67 (43%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +    PL +   ++ +   G + V+ +  +L GI+T  D
Sbjct: 376 ALHHGFGHAPVKGYMTTDVKTLSPDTPLAEIQRLMVQWDIGRLPVL-QDGQLVGIVTRTD 434

Query: 272 IFRNFHK 278
           + R+ H+
Sbjct: 435 VLRHLHE 441


>gi|52078500|ref|YP_077291.1| inosine 5'-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52783864|ref|YP_089693.1| inosine 5'-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52001711|gb|AAU21653.1| inosine-monophosphate dehydrogenase [Bacillus licheniformis ATCC
           14580]
 gi|52346366|gb|AAU39000.1| GuaB [Bacillus licheniformis ATCC 14580]
          Length = 488

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDLSVELTPSLKLNVPIISAGMDTVTEAQMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 85  VDKVKRSERGVITNPFFLTPEHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K   V     T L  A ++L+++ I  L ++DD     G++  
Sbjct: 145 FISD---YSMKISDVMTKEELVTAPVGTTLDEAEKILQKYKIEKLPLLDDQGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|238793768|ref|ZP_04637389.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           intermedia ATCC 29909]
 gi|238726832|gb|EEQ18365.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           intermedia ATCC 29909]
          Length = 280

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK    +L ++L      +   A+E + + + R+++TGIG S
Sbjct: 85  NQILSTDSLKIVGEKLLSEKAA--ALRATLDINSEQRLTQALEMLLSAR-RIILTGIGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGIMAVSETDMHAQLAAVQALDARDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RSGAKVLALTSFSPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|325675537|ref|ZP_08155221.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus equi ATCC
           33707]
 gi|325553508|gb|EGD23186.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus equi ATCC
           33707]
          Length = 500

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 75/209 (35%), Gaps = 26/209 (12%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIAL 193
              +++    D VL LP   +  P+ +              P  S+ M       +AI++
Sbjct: 9   NKVAMLGLTFDDVLLLPAASDVVPNQVDTSTQLTREIRLGVPLVSSAMDTVTEARMAISM 68

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
             +         VLH    +         V  S           K    + D   + +  
Sbjct: 69  ARAGG-----MGVLHRNSSVEAQSGWVETVKRSEAGMVTDPVTCKPTDTIADVEAMCARF 123

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQL 308
           R   + V ++  +L GIIT  D+     ++     V +VM K P     E     VA+ L
Sbjct: 124 RISGLPVANDAGELVGIITNRDMQFEVDQN---RQVAEVMTKAPLITAREGVTAEVALGL 180

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           LR+H +  L +VD   K  G++   D ++
Sbjct: 181 LRRHKVEKLPIVDGQGKLTGLITVKDFVK 209


>gi|332710747|ref|ZP_08430688.1| tRNA nucleotidyltransferase/poly(A)
           polymerase/CBS-domain-containing membrane protein
           [Lyngbya majuscula 3L]
 gi|332350524|gb|EGJ30123.1| tRNA nucleotidyltransferase/poly(A)
           polymerase/CBS-domain-containing membrane protein
           [Lyngbya majuscula 3L]
          Length = 688

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++VVD+  +L GII+  D+    H       V
Sbjct: 101 MSSPVRTIRPNTKIKEAQRILLRYGHSGLSVVDQQDQLVGIISRRDLDLALHHGFGHAPV 160

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M K+ K I  +T +     L+  ++I  L V+ +  + +GIV   D+LR
Sbjct: 161 KGYMTKHIKTITPETSMADIQSLMVTYDIGRLPVL-EDGQLMGIVTRTDVLR 211



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  D+M    + I  +T +  A ++L ++  S L VVD   + +GI+   DL
Sbjct: 95  LTARDLMSSPVRTIRPNTKIKEAQRILLRYGHSGLSVVDQQDQLVGIISRRDL 147



 Score = 39.1 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 30/78 (38%), Gaps = 4/78 (5%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    I  +     + D  +++     G + V+ E  +L GI+T  D
Sbjct: 150 ALHHGFGHAPVKGYMTKHIKTITPETSMADIQSLMVTYDIGRLPVL-EDGQLMGIVTRTD 208

Query: 272 IFRNF---HKDLNTLSVE 286
           + R       ++  L V+
Sbjct: 209 VLRQLFQEELNVKQLKVD 226


>gi|295398156|ref|ZP_06808205.1| inosine-5'-monophosphate dehydrogenase [Aerococcus viridans ATCC
           11563]
 gi|294973675|gb|EFG49453.1| inosine-5'-monophosphate dehydrogenase [Aerococcus viridans ATCC
           11563]
          Length = 496

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 42/205 (20%), Positives = 84/205 (40%), Gaps = 18/205 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +T ++  ++  H++++   + L  +         P  SA M      ++AIA+      
Sbjct: 15  GLTFDDVLLLPAHSEVLPNEVDLGVQLAPNLKLNIPILSASMDTVTDASMAIAMARQGGL 74

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V  S   +            + +A+ ++   R   V 
Sbjct: 75  G-----IIHKNMTIAQQADEVRKVKRSESGVISDPFYLFPESSVKEAVALMGRYRISGVP 129

Query: 256 VVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           +++  E  KL GI+T  DI      + +  ++E+VM K+  V+    T L  A  +L ++
Sbjct: 130 IINNEEDHKLLGILTNRDIRFL---ENHDQAIENVMTKDDLVVAPQGTSLEEASHILYEN 186

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L++VDD  +  G+V   D+ R
Sbjct: 187 RIEKLLLVDDQGRLTGLVTIKDIER 211


>gi|294053802|ref|YP_003547460.1| putative signal transduction protein with CBS domains
           [Coraliomargarita akajimensis DSM 45221]
 gi|293613135|gb|ADE53290.1| putative signal transduction protein with CBS domains
           [Coraliomargarita akajimensis DSM 45221]
          Length = 151

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF-- 276
            S +     S+  V     + +A+  ++ +R G + V  +   + GI TE D + R    
Sbjct: 9   VSILKEKSSSVHCVAEQVTVAEAVNEMNRQRIGSILVKADDGTVTGIFTERDVLVRVVSA 68

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D     V++VM  + + I  DT +  AMQL+ +  +  L ++D      G++   D+ 
Sbjct: 69  GRDPQATKVQEVMTPDFESIAPDTSVEDAMQLMTEQRVRHLPILD-GGTLCGMISIGDVT 127

Query: 337 R 337
           R
Sbjct: 128 R 128



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 49/140 (35%), Gaps = 13/140 (9%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             + +++I  E  S V C A+    +               S +++   G    I     
Sbjct: 4   NKVSVVSILKEKSSSVHCVAE---QVTVAEAVNEMNRQRIGSILVKADDGTVTGI----- 55

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
             F+E D  V       G                  +     + DA+ +++E+R   + +
Sbjct: 56  --FTERDVLVR--VVSAGRDPQATKVQEVMTPDFESIAPDTSVEDAMQLMTEQRVRHLPI 111

Query: 257 VDEGQKLKGIITEGDIFRNF 276
           +D G  L G+I+ GD+ R  
Sbjct: 112 LD-GGTLCGMISIGDVTRWL 130


>gi|284054104|ref|ZP_06384314.1| signal transduction protein [Arthrospira platensis str. Paraca]
 gi|291567536|dbj|BAI89808.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 157

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  ++    PL DAI +L++ R G + V+D   KL G I+E DI             
Sbjct: 9   MTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSGVTPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVL 317
                         + K+L+     +V DVM   P   I  D  L+ A +L+ Q  +  L
Sbjct: 69  TILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAARLMNQKQVHRL 128

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+D  +K IGI+   D++R
Sbjct: 129 PVLDGSKKLIGILTCGDIIR 148



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 23/61 (37%), Positives = 34/61 (55%), Gaps = 2/61 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL--RFG 339
             +V DVM  NP VI  D  LT A+ LL Q+ I  L V+D+  K +G +   D++  + G
Sbjct: 2   AKTVADVMTPNPLVISPDAPLTDAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSG 61

Query: 340 I 340
           +
Sbjct: 62  V 62



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            +L          + S   +  +K  C L +A  ++++K+   + V+D  +KL GI+T G
Sbjct: 85  KELHKALGQTVGDVMSNGPMITIKPDCSLSEAARLMNQKQVHRLPVLDGSKKLIGILTCG 144

Query: 271 DIFRNFHKDLNT 282
           DI R      + 
Sbjct: 145 DIIRVMAIGTDD 156


>gi|89901569|ref|YP_524040.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89346306|gb|ABD70509.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 146

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 55/122 (45%), Gaps = 5/122 (4%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
           +    V  S     +V       + DA  I+++   G + V+D    L+GI+TE D+  R
Sbjct: 1   MPERTVFQSIPQRHVVSLLPQASVWDAACIMTKANCGSILVIDAAGVLQGILTERDLMTR 60

Query: 275 NFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              K LN  +    DVM +NP+ +  D  +  A+ ++ +     L +++   K +G+   
Sbjct: 61  VLAKALNPQTTLASDVMTRNPQSVGPDMRVADAVVIMIERGFRHLPIINTAGKILGVFSI 120

Query: 333 LD 334
            D
Sbjct: 121 RD 122


>gi|224283870|ref|ZP_03647192.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
 gi|311064747|ref|YP_003971472.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           PRL2010]
 gi|310867066|gb|ADP36435.1| GuaB Inosine-5'-monophosphate dehydrogenase [Bifidobacterium
           bifidum PRL2010]
          Length = 506

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 23/206 (11%)

Query: 150 SVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLES 196
           S +    D VL LP E +  P                 PT SA M       +AIA+  +
Sbjct: 12  SKLGLAYDDVLLLPNETDVIPSEVDTTTHLTREITMKVPTISAAMDTVTESEMAIAMARN 71

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFG 252
                    VLH    +         V  S   +      V     L D   +  +    
Sbjct: 72  GGIG-----VLHRNLSIDDQAAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHIS 126

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQ 311
            + VVD+  +L GIIT  D+     +D + L V+DVM K N      +     A +LL Q
Sbjct: 127 GLPVVDKENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDDAHRLLAQ 186

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H +  L ++DD  K  G++   D ++
Sbjct: 187 HKVEKLPLIDDNGKLAGLITVKDFVK 212


>gi|126174850|ref|YP_001050999.1| signal-transduction protein [Shewanella baltica OS155]
 gi|125998055|gb|ABN62130.1| cyclic nucleotide-binding protein [Shewanella baltica OS155]
          Length = 615

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +  ++     +  A  ++   R   + V+D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSAPIVIDAHASVTQAALLMRNSRVSSLLVMD-NHKLVGILTDKDLRNRVLAAGLDGHI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 6/72 (8%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M   P VI     +T A  L+R   +S L+V+D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSRVSSLLVMDN-HKLVGILTD 198

Query: 333 LDL----LRFGI 340
            DL    L  G+
Sbjct: 199 KDLRNRVLAAGL 210



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++D+  K  G++T  DI R
Sbjct: 213 HIAVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267


>gi|302540275|ref|ZP_07292617.1| inosine-5'-monophosphate dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302457893|gb|EFL20986.1| inosine-5'-monophosphate dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 210

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 54/135 (40%), Gaps = 6/135 (4%)

Query: 208 HPGGKLGTLFVCASDVMH-----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
             GG+   +   A            D +  V  G    +   +L   R G + VVDE  K
Sbjct: 47  RAGGRWRLVREEAGMKHRKIGNVMSDDVVRVGHGASCEEVGALLERHRIGGLPVVDEDDK 106

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + G+IT  D+      +   +S    M +    +     +  A + + +H +  L VVD+
Sbjct: 107 VVGVITGTDLAGAGGVE-GAVSAGQRMSRPAVTVRPQDTIVDAARSMARHRVERLPVVDE 165

Query: 323 CQKAIGIVHFLDLLR 337
             + IGIV   DLLR
Sbjct: 166 EDRLIGIVTRRDLLR 180



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +    + +VM  +   +           LL +H I  L VVD+  K +G++   DL 
Sbjct: 58  EAGMKHRKIGNVMSDDVVRVGHGASCEEVGALLERHRIGGLPVVDEDDKVVGVITGTDLA 117

Query: 337 RFG 339
             G
Sbjct: 118 GAG 120



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 27/64 (42%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G +    S           V+    ++DA   ++  R   + VVDE  +L GI+T  D+
Sbjct: 119 AGGVEGAVSAGQRMSRPAVTVRPQDTIVDAARSMARHRVERLPVVDEEDRLIGIVTRRDL 178

Query: 273 FRNF 276
            R F
Sbjct: 179 LRVF 182


>gi|199597919|ref|ZP_03211344.1| IMP dehydrogenase/GMP reductase [Lactobacillus rhamnosus HN001]
 gi|199591176|gb|EDY99257.1| IMP dehydrogenase/GMP reductase [Lactobacillus rhamnosus HN001]
          Length = 495

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M      A+AIA+            V+H    +      
Sbjct: 32  VDLSVQLADNLKLNIPIISAGMDTVTESAMAIAMARQGGLG-----VIHKNMSIEAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIF 273
              V  S + + +         P+ DA  ++ + R   V +V+    +KL GIIT  D+ 
Sbjct: 87  VLKVKRSENGVIVDPFFLTADKPVSDAEALMKKYRISGVPIVNNTTDRKLTGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D  ++ ++ VM K         T +  A  +L+   I  L ++D   +  G++  
Sbjct: 147 YV---DDKSVLIDTVMTKEGLVTAPAGTSIEDAEAILQARKIEKLPLIDKQGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|152971417|ref|YP_001336526.1| putative DNA-binding transcriptional regulator [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206576973|ref|YP_002237096.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|238896012|ref|YP_002920748.1| putative DNA-binding transcriptional regulator [Klebsiella
           pneumoniae NTUH-K2044]
 gi|262040297|ref|ZP_06013548.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288934058|ref|YP_003438117.1| RpiR family transcriptional regulator [Klebsiella variicola At-22]
 gi|290508254|ref|ZP_06547625.1| DNA-binding transcriptional regulator [Klebsiella sp. 1_1_55]
 gi|330007692|ref|ZP_08306031.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
 gi|150956266|gb|ABR78296.1| putative transport protein (ABC superfamily, membrane) [Klebsiella
           pneumoniae subsp. pneumoniae MGH 78578]
 gi|206566031|gb|ACI07807.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|238548330|dbj|BAH64681.1| putative transport protein [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
 gi|259042406|gb|EEW43426.1| conserved hypothetical protein [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|288888787|gb|ADC57105.1| transcriptional regulator, RpiR family [Klebsiella variicola At-22]
 gi|289777648|gb|EFD85645.1| DNA-binding transcriptional regulator [Klebsiella sp. 1_1_55]
 gi|328535373|gb|EGF61855.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
          Length = 282

 Score = 95.0 bits (235), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ +SL          AV  ++  + RV++TGIG SG +    +  L   G  + 
Sbjct: 104 KDNVAAMHASLDVNTEETLREAVTLLRNAR-RVIVTGIGASGLVARNFSWKLMKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  ++ DDL++ +S+SG   E+      A R    ++AIT  + + +  
Sbjct: 163 SEQDMHALLATVQAMSSDDLLLAISYSGERREINMAAGEALRVGCKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L + L++ 
Sbjct: 223 QATHCLYTIAEEQATR--SAAISSTSAQMMLTDLLFMGLVQQ 262


>gi|320457561|dbj|BAJ68182.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 528

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 69  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 123

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+      D +TL V+DV
Sbjct: 124 DPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDDYDTLKVKDV 183

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VDD  +  G++   D ++
Sbjct: 184 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVK 233


>gi|170761179|ref|YP_001788035.1| nucleotidyl transferase [Clostridium botulinum A3 str. Loch Maree]
 gi|169408168|gb|ACA56579.1| nucleotidyl transferase [Clostridium botulinum A3 str. Loch Maree]
          Length = 350

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 60/114 (52%), Gaps = 1/114 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M +     LV     + D++ IL +   G V VVD+ +KL G +T+GDI R   K ++  
Sbjct: 1   MINNIDKILVYSNYSIKDSLQILDKGAKGIVIVVDKDKKLIGTVTDGDIRRAILKGISLN 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + ++M K+P  I ++T    A +++ ++ I  L +VD+    + ++   D++
Sbjct: 61  ECIVNIMNKSPISIKQETSREKAKEIIIKNGIKDLPIVDENNTIVDMITINDII 114


>gi|319440530|ref|ZP_07989686.1| signal transduction protein [Corynebacterium variabile DSM 44702]
          Length = 633

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 7/144 (4%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-- 258
             D   L        L    SD+ H    +  V+    + +A  ++ E+R  C+ VVD  
Sbjct: 140 RADADRLRQRTGTDVLRRTISDLDHHRRDLVTVEADVTVAEAAALMGEQRVSCLPVVDST 199

Query: 259 -EGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
             G++L GIIT+ D+  R     ++  + V  +M  +P  +  +  +  AM  +   +I 
Sbjct: 200 AGGRRLVGIITDRDLRSRVLAVGVDAGVPVRQIMTPDPVSVEPEVTVFEAMLRMSDLHIH 259

Query: 316 VLMVVD--DCQKAIGIVHFLDLLR 337
            L V D       +GI+   D++R
Sbjct: 260 HLPVTDASQGGVLVGILAASDVMR 283



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFH 277
                        V+    + +A+  +S+     + V D   G  L GI+   D+ R   
Sbjct: 227 VPVRQIMTPDPVSVEPEVTVFEAMLRMSDLHIHHLPVTDASQGGVLVGILAASDVMRTMR 286

Query: 278 KDLNTLSVE 286
            D   L+ +
Sbjct: 287 NDPIYLTAD 295


>gi|322697495|gb|EFY89274.1| ribosomal protein subunit S4 [Metarhizium acridum CQMa 102]
          Length = 694

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R          +++ D+
Sbjct: 122 QIKPQTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAANITIADI 181

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 182 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 225



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+    SV
Sbjct: 289 PPTTVSVRTSVKEAAALMKENHTTAVLVQDA-GAITGIFTSKDVVLRVIAPGLDPANCSV 347

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 348 VRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 397


>gi|183599960|ref|ZP_02961453.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
 gi|188022235|gb|EDU60275.1| hypothetical protein PROSTU_03481 [Providencia stuartii ATCC 25827]
          Length = 623

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 4/112 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVE 286
           +I ++  G  + DA   +  K      V+D G+ L GIIT+ D+  R     L+    V 
Sbjct: 164 NIVVITPGTSVQDAAQEMVRKHRSSALVMD-GETLLGIITDRDLTKRVVALGLDIKTPVS 222

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM +NP  I  +  +  A++L+ QHNI  L V+ +  +  G++    L++ 
Sbjct: 223 KVMTENPITIAANAPIINAIELMMQHNIRSLPVMTN-HRITGVLTATSLVQK 273


>gi|319648528|ref|ZP_08002743.1| inosine-5'-monophosphate dehydrogenase [Bacillus sp. BT1B_CT2]
 gi|317389376|gb|EFV70188.1| inosine-5'-monophosphate dehydrogenase [Bacillus sp. BT1B_CT2]
          Length = 508

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            ++H    +      
Sbjct: 50  VDLSVELTPSLKLNVPIISAGMDTVTEAQMAIAMARQGGLG-----IIHKNMSIEQQAEQ 104

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + DA  ++ + R   V +VD  E QKL GIIT  D+ 
Sbjct: 105 VDKVKRSERGVITNPFFLTPEHQVFDAEHLMGKYRISGVPIVDNEEDQKLVGIITNRDLR 164

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++ + DVM K   V     T L  A ++L+++ I  L ++DD     G++  
Sbjct: 165 FISD---YSMKISDVMTKEELVTAPVGTTLDEAEKILQKYKIEKLPLLDDQGVLKGLITI 221

Query: 333 LDL 335
            D+
Sbjct: 222 KDI 224


>gi|209527145|ref|ZP_03275658.1| putative signal transduction protein with CBS domains [Arthrospira
           maxima CS-328]
 gi|209492394|gb|EDZ92736.1| putative signal transduction protein with CBS domains [Arthrospira
           maxima CS-328]
          Length = 157

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  ++    PL DAI +L++ R G + V+D   KL G I+E DI             
Sbjct: 9   MTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSGVTPPAYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVL 317
                         + K+L+     +V DVM   P   I  D  L+ A +L+ Q  +  L
Sbjct: 69  TILDSVIYLENPSRYEKELHKALGQTVGDVMSNGPMITIKPDCSLSEAARLMNQKQVHRL 128

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+D  +K IGI+   D++R
Sbjct: 129 PVLDGSKKLIGILTCGDIIR 148



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL--RFG 339
             +V DVM  NP VI  D  L  A+ LL Q+ I  L V+D+  K +G +   D++  + G
Sbjct: 2   AKTVADVMTPNPLVISPDAPLADAIALLAQNRIGGLPVMDNTGKLVGFISETDIIWQQSG 61

Query: 340 I 340
           +
Sbjct: 62  V 62



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            +L          + S   +  +K  C L +A  ++++K+   + V+D  +KL GI+T G
Sbjct: 85  KELHKALGQTVGDVMSNGPMITIKPDCSLSEAARLMNQKQVHRLPVLDGSKKLIGILTCG 144

Query: 271 DIFRNFHKDLNT 282
           DI R      + 
Sbjct: 145 DIIRVMAMGTDD 156


>gi|319940194|ref|ZP_08014547.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           1_2_62CV]
 gi|319810665|gb|EFW06995.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           1_2_62CV]
          Length = 493

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESKMAIAIARAGGLG-----VIHKNMSIEQQADEIRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++   R   V VV+  E +KL GIIT  D+   F  D N     
Sbjct: 100 DPFFLTPTHTVSDAEELMERYRISGVPVVETLENRKLVGIITNRDMR--FITDYNQPISA 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  KN       T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 158 HMTSKNLITAPVGTDLETAERILHEHRIEKLPLVDDYGRLSGLITIKDI 206


>gi|313141025|ref|ZP_07803218.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
 gi|313133535|gb|EFR51152.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           NCIMB 41171]
          Length = 514

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 77/206 (37%), Gaps = 23/206 (11%)

Query: 150 SVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLES 196
           S +    D VL LP E +  P                 PT SA M       +AIA+  +
Sbjct: 20  SKLGLAYDDVLLLPNETDVIPSEVDTTTHLTREITMKVPTISAAMDTVTESEMAIAMARN 79

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFG 252
                    VLH    +         V  S   +      V     L D   +  +    
Sbjct: 80  GGIG-----VLHRNLSIDDQAAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHIS 134

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQ 311
            + VVD+  +L GIIT  D+     +D + L V+DVM K N      +     A +LL Q
Sbjct: 135 GLPVVDKENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDDAHRLLAQ 194

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H +  L ++DD  K  G++   D ++
Sbjct: 195 HKVEKLPLIDDNGKLAGLITVKDFVK 220


>gi|197104881|ref|YP_002130258.1| inosine-5'-monophosphate dehydrogenase [Phenylobacterium zucineum
           HLK1]
 gi|196478301|gb|ACG77829.1| inosine-5'-monophosphate dehydrogenase [Phenylobacterium zucineum
           HLK1]
          Length = 486

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         VLH    +        +V      + +
Sbjct: 39  NIPLVSAAMDTVTESRLAIAMAQAGGIG-----VLHRNLTVDEQADQVREVKRYESGMVI 93

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +   I + KR     VVDE  KL GI+T  D+      D+     + +
Sbjct: 94  NPLTIGPDTTLGEVRQIKARKRISGFPVVDEAGKLCGILTNRDMRFESRDDI---PAKAL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N   + E      A  LLR+H I  L+VVDD   A+G++   D+ + 
Sbjct: 151 MTRENLVTVKEGVSQAEARDLLRRHKIERLIVVDDEYHAVGLITVKDMEKA 201


>gi|260579168|ref|ZP_05847059.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
           ATCC 43734]
 gi|258602714|gb|EEW16000.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
           ATCC 43734]
          Length = 511

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 76/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   ++++   +    +     +   P  SA M       +A+A+
Sbjct: 16  NKVALVGLTFDDVLLLPAASEVIPSGVDTSTQFTRNINLNIPVASAAMDTVTEARMAVAM 75

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEK 249
                       VLH    +         V  S   +            + +   + +  
Sbjct: 76  ARHGGIG-----VLHRNLSIEDQAQQVEIVKRSEAGMITDPVTASPDMTIQEVDDLCARY 130

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VVD+   L GI+T  D+   F  D +   V + M   P V+  E      A+ L
Sbjct: 131 RISGLPVVDDEGVLVGILTNRDMR--FESDFSR-KVSEAMTPMPLVVAQEGVSAEAALSL 187

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++ +  L +VD   K  G++   D  +
Sbjct: 188 LSENKVEKLPIVDGAGKLTGLITVKDFAK 216


>gi|330685222|gb|EGG96884.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus epidermidis
           VCU121]
          Length = 488

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVRLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +V+  + ++L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFYLTPDESVYEAEALMGKYRISGVPIVNNLDDRELVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K +       T L  A  +L++H I  L +V +  +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEDLITAPVGTTLDEAEAILQEHKIEKLPLV-ENGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|134299756|ref|YP_001113252.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum reducens
           MI-1]
 gi|134052456|gb|ABO50427.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum reducens
           MI-1]
          Length = 484

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            V+H    +    +    V  S      
Sbjct: 43  NVPIMSAGMDTVTESRMAIAMAREGGIG-----VIHKNMSIARQALEVDKVKRSEHGIIT 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    P+ +A  ++       V +  +  KL GI+T  D+   F  + N +   D+
Sbjct: 98  DPIFLSPESPVSEAHELMERYHISGVPITVD-GKLVGILTNRDLR--FETNDNRIC-GDI 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T L  A Q+L +H +  L +VD+  K  G++   D+ +  
Sbjct: 154 MTKDNLITAPVGTTLDEAKQILMKHKVEKLPIVDENGKLRGLITIKDIKKAK 205


>gi|328854683|gb|EGG03814.1| hypothetical protein MELLADRAFT_117255 [Melampsora larici-populina
           98AG31]
          Length = 720

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/133 (27%), Positives = 56/133 (42%), Gaps = 8/133 (6%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HPG +        S +         V     + DA  + + KR  CV VVDE + L GI 
Sbjct: 79  HPGPRPRRQAGTVSALR--PLPALTVPDNITVADASQLCAAKRTDCVLVVDEDEHLCGIF 136

Query: 268 TEGDIF-RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T  D+  R     L+  S  V ++M KNP V  + T  T A+  +       L V ++  
Sbjct: 137 TAKDLAFRVIGDGLDPRSTLVSEIMTKNPMVTRDTTSATEALTTMVTRGFRHLPVCNEEG 196

Query: 325 KAIGIVHFLDLLR 337
             IG++   D+ +
Sbjct: 197 DVIGLL---DITK 206



 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 7/121 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDI-FRNFHKD 279
            ++ +  +   V +   + +A  ++ +     V V+ ++G+K+ GI T  D+  R     
Sbjct: 269 SILDARTTAATVGVKTSVKEAAKLMRDHHTTAVCVMENDGKKIAGIFTSKDVVLRVIAAG 328

Query: 280 LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +  V  VM  +P   L    +  A++ +   +   L VVD+  +  G V   D+L+
Sbjct: 329 LDARTCSVVRVMTPHPDTALPSLSIQEALRKMHDGHYLNLPVVDEAGQLQGCV---DVLK 385

Query: 338 F 338
            
Sbjct: 386 L 386


>gi|315642505|ref|ZP_07897014.1| inosine-5'-monophosphate dehydrogenase [Enterococcus italicus DSM
           15952]
 gi|315482263|gb|EFU72824.1| inosine-5'-monophosphate dehydrogenase [Enterococcus italicus DSM
           15952]
          Length = 494

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDMSVQLAKNLKLNIPIISASMDTVTDSKMAIAMARQGGLG-----VIHKNMSIAAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + +A  ++S  R   V +V+  + +KL GI+T  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPEHTIAEAEELMSRYRISGVPIVETLDSRKLIGILTNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    +S+ +VM K N       T L  A + L++H I  L ++D+  +  G++  
Sbjct: 147 FVTD---YAVSISEVMTKDNLVTAPVGTSLKEAEKTLQKHKIEKLPLIDEDGRLSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|38233189|ref|NP_938956.1| inositol-5-monophosphate dehydrogenase [Corynebacterium diphtheriae
           NCTC 13129]
 gi|38199448|emb|CAE49095.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           diphtheriae]
          Length = 506

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/209 (18%), Positives = 78/209 (37%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   ++++   ++   +         P  SA M       +AIA+
Sbjct: 14  NKVALVGLTFDDVLLLPDASEVIPSEVSTSTQLTRNISLNIPVVSAAMDTVTESRMAIAM 73

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       +LH    +         V  S                + +   + +  
Sbjct: 74  AREGG-----MGILHRNLSIEEQAAHVETVKRSESGMVTDPVTCSPDMSISEVDALCARF 128

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQL 308
           R   + VVD   KL GI T  D+   F ++ +   V +VM   P V+ E+      A+ L
Sbjct: 129 RISGIPVVDSEGKLLGICTNRDMR--FEQNFDR-KVSEVMTPMPLVVAEEGVTKEQALSL 185

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + +  L +VD   K +G++   D ++
Sbjct: 186 LSTNKVEKLPIVDKQGKLVGLITVKDFVK 214


>gi|90424562|ref|YP_532932.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB18]
 gi|90106576|gb|ABD88613.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisB18]
          Length = 497

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++              G+   +            +   
Sbjct: 45  NIPIIASAMDTVTEARMAIAMAQAGGIGVIH-RNFDVDGQAAQVRQVKKYESGMVVNPLT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L +A+ ++S   F  + VV         KL GI+T  D+      +     + +
Sbjct: 104 IGPDALLGEALALMSAHGFSGIPVVTGASKGVPGKLVGILTNRDVRFATDPN---QKISE 160

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E      A ++L QH I  L+VVD+  + +G++   D+ + 
Sbjct: 161 LMTHENLVTVREGVSQAEAKRMLHQHRIEKLLVVDEQYRCVGLITVKDMEKA 212


>gi|322386451|ref|ZP_08060080.1| inosine-5'-monophosphate dehydrogenase [Streptococcus cristatus
           ATCC 51100]
 gi|321269537|gb|EFX52468.1| inosine-5'-monophosphate dehydrogenase [Streptococcus cristatus
           ATCC 51100]
          Length = 493

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPNHTIAEADELMGRYRISGVPVVETMENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAERILQEHRIEKLPLVDENGRLSGLITIKDI 206


>gi|307945229|ref|ZP_07660565.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
           domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307771102|gb|EFO30327.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
           domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 635

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 50/137 (36%), Gaps = 3/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F                        +    +    + +A  ++ +K    + + +    L
Sbjct: 152 FDRTGKRDAPRRELATTRAETLMAANPYTCQPNTTVREAAVLMRDKHVSSLCITNGEDSL 211

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGIIT  D+  +   +  +    V D+M  +P  +    + +  + L+ +  I  + +V 
Sbjct: 212 KGIITVRDLSGKVLAEGRSYDTPVSDIMTVSPFTLTPSAIGSDVLHLMMERRIGHVPIV- 270

Query: 322 DCQKAIGIVHFLDLLRF 338
              + +GI+   DL R+
Sbjct: 271 SGGRLVGIITQTDLTRY 287


>gi|300856862|ref|YP_003781846.1| inosine-5'-monophosphate dehydrogenase [Clostridium ljungdahlii DSM
           13528]
 gi|300436977|gb|ADK16744.1| inosine-5'-monophosphate dehydrogenase [Clostridium ljungdahlii DSM
           13528]
          Length = 484

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 41  NIPLMSAGMDTVTDSKMAIAMAREGGIG-----IIHKNMTIEEQAMEVDKVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA++++S+ R   V +  E  KL GIIT  DI    + D     + +V
Sbjct: 96  DPFFLSPDNSINDALSLMSKYRISGVPITVE-GKLVGIITNRDIVFETNYD---KKISEV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M +       EDT +  A ++L+   I  L +VD      G++   D+ +  
Sbjct: 152 MTREKLITAPEDTTIEEAKEILKTSKIEKLPLVDKDNNLRGLITIKDIEKVK 203


>gi|111023162|ref|YP_706134.1| inositol-5-monophosphate dehydrogenase [Rhodococcus jostii RHA1]
 gi|110822692|gb|ABG97976.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
          Length = 507

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 44/204 (21%), Positives = 71/204 (34%), Gaps = 16/204 (7%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI--------MQLAIGDALAIALLESRN 198
              +++    D VL LP      P  +  ++           +  +  D +  A +    
Sbjct: 16  NKVAMLGLTYDDVLLLPAASNVIPGQVDTSSQLTRDIRLRVPLVSSAMDTVTEARMAIAM 75

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCV 254
                  VLH    +         V  S           K    L +     +  R   +
Sbjct: 76  ARAGGMGVLHRNLSVEAQAGQVETVKRSEAGMVTDPVTCKPSDTLAEVDAKCARFRISGL 135

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHN 313
            V DE  +L GIIT  D+     ++    +V +VM K P     E     VA+ LLR+H 
Sbjct: 136 PVTDEAGQLVGIITNRDMRFEVDQN---RAVSEVMTKAPLITAQEGVTAEVALGLLRRHK 192

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VD   K  G++   D ++
Sbjct: 193 IEKLPIVDGQGKLTGLITVKDFVK 216


>gi|323490221|ref|ZP_08095438.1| inosine 5'-monophosphate dehydrogenase [Planococcus donghaensis
           MPA1U2]
 gi|323396117|gb|EGA88946.1| inosine 5'-monophosphate dehydrogenase [Planococcus donghaensis
           MPA1U2]
          Length = 487

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            ++H    +      
Sbjct: 30  IDLAVELTPTLKLKIPVISAGMDTVTEAKMAIAMARQGGLG-----IVHKNMSIEEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S + +            + DA  ++ + R   V +V+     KL GIIT  D+ 
Sbjct: 85  VVTVKRSENGVITDPFFLTPDHQVYDAEHLMGKYRISGVPIVNNEDELKLVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  +L + DVM K   V     T L  A ++L+Q+ I  L +V+      G++  
Sbjct: 145 --FIQD-YSLKINDVMTKEQLVTAPVGTTLEDAEKILQQYKIEKLPIVNSEGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|238061022|ref|ZP_04605731.1| inosine-5'-monophosphate dehydrogenase [Micromonospora sp. ATCC
           39149]
 gi|237882833|gb|EEP71661.1| inosine-5'-monophosphate dehydrogenase [Micromonospora sp. ATCC
           39149]
          Length = 520

 Score = 95.0 bits (235), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    L    +    V  S   +  
Sbjct: 69  TIPLLSSAMDTVTEARMAIAMARQGGIG-----VLHRNLSLEDQALQVDLVKRSESGMIT 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L D   +    R   V VVD   +L GI+T  D+         +  V ++
Sbjct: 124 NPVTASPDDTLRDVDALCGRYRISGVPVVDGDGQLVGIVTNRDMRFVSEP---STPVREI 180

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P V          A+ LLRQH +  L +VD   +  G++   D  +
Sbjct: 181 MTRTPLVTAPVGVSKDEALALLRQHKVEKLPIVDGSGRLRGLITVKDFTK 230


>gi|295838476|ref|ZP_06825409.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB74]
 gi|295827009|gb|EFG65179.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB74]
          Length = 500

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 50/192 (26%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           V+  A   +              P  SA M       +AIA+            VLH   
Sbjct: 27  VSDMAPDEIDTSSRLSKNVRLNIPLVSAAMDKVTEARMAIAMARQGGVG-----VLHRNL 81

Query: 212 KLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            +         V  S          V     L +A  I ++ R   V VVD   KL GI+
Sbjct: 82  SVEDQANQVDLVKRSESGMVTDPITVHPDATLEEADAICAKFRISGVPVVDGAGKLLGIV 141

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T  D+   F  D  T  V +VM   P V  +       AM LLR+H I  L +VDD    
Sbjct: 142 TNRDM--AFETD-RTRKVREVMTPMPLVTGKVGISGVDAMALLRRHKIEKLPLVDDAGVL 198

Query: 327 IGIVHFLDLLRF 338
            G++   D ++ 
Sbjct: 199 KGLITVKDFVKA 210


>gi|254517653|ref|ZP_05129709.1| inositol-monophosphate dehydrogenase [Clostridium sp. 7_2_43FAA]
 gi|226911402|gb|EEH96603.1| inositol-monophosphate dehydrogenase [Clostridium sp. 7_2_43FAA]
          Length = 482

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            ++H    +         V    +    
Sbjct: 41  NIPLMSASMDTVTESKMAIAIAREGGIG-----IIHKNMTIEDQAKEVDRVKRQENGVIT 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A  ++++ R   V +   G KL GIIT  DI   F  + + L V +V
Sbjct: 96  DPIFLSENHTIRQAQELMAQYRISGVPIT-RGTKLVGIITNRDIV--FETNYDRL-VSEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+P     E T L  A+++L++H I  L +VDD     G++   D+ +  
Sbjct: 152 MTKSPLITSGEGTTLEQALEILKKHKIEKLPLVDDDNNLKGLITIKDIEKVK 203


>gi|13476895|ref|NP_108464.1| inosine 5'-monophosphate dehydrogenase [Mesorhizobium loti
           MAFF303099]
 gi|14027656|dbj|BAB53925.1| inosine monophosphate dehydrogenase [Mesorhizobium loti MAFF303099]
          Length = 500

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++            P  +   +            +   
Sbjct: 46  NVPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNFSPAEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA++++       + VV+ G        +L GI+T  D+            V
Sbjct: 105 IGPDATLADALSLMRTYSISGIPVVENGGTGGHKTGRLVGILTNRDVRFASDP---AQKV 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E+     A +LL QH I  L+VVD     +G++   D+
Sbjct: 162 YELMTRENLITVKENVDQDEAKRLLHQHRIEKLVVVDKQGNCVGLITVKDI 212


>gi|302916341|ref|XP_003051981.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256732920|gb|EEU46268.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 672

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 70/187 (37%), Gaps = 20/187 (10%)

Query: 166 PESCPHGLAPTTSAI-----MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
             S P G +P  S+I            A +++    +    ++         L       
Sbjct: 16  RGSAPFGNSPGGSSIPRPVLETAQAETASSLSASRQKQSKRDEAIRKKLENDLSKKKHLT 75

Query: 221 SDVMHSGDSIP------------LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           S   H+  + P             +K    + +A  +++ KR  CV V D+  ++ GI T
Sbjct: 76  SRARHTRKAPPGTVLALKPSPALQIKPATTVSEAAQLMAAKREDCVLVTDDDDRIAGIFT 135

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
             D+           + +++ ++M KNP     DT  T A+ L+ +     L V+D+ Q 
Sbjct: 136 AKDLAFRVVGAGAKASAITIAEIMTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQD 195

Query: 326 AIGIVHF 332
             G++  
Sbjct: 196 ISGVLDI 202



 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E R   V V D    + GI T  D+  R     L+    SV
Sbjct: 266 PPTTVSVRTSVKEAAQLMKENRTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPANCSV 324

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  L  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 325 VRVMTPHPDFAPMDMTLQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 374


>gi|213691487|ref|YP_002322073.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
 gi|213522948|gb|ACJ51695.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 15697]
          Length = 517

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/170 (27%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+      D +TL V+DV
Sbjct: 113 DPLTVSPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASDDYDTLKVKDV 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VDD  +  G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDDEGRLTGLITVKDFVK 222


>gi|300782702|ref|YP_003762993.1| IMP dehydrogenase [Amycolatopsis mediterranei U32]
 gi|299792216|gb|ADJ42591.1| IMP dehydrogenase [Amycolatopsis mediterranei U32]
          Length = 503

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/199 (21%), Positives = 71/199 (35%), Gaps = 16/199 (8%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +    D VL LP E +  P  +   +     + +G  L  A +++   +     +   GG
Sbjct: 17  LGLTFDDVLLLPAESDVVPSSVDTRSRLTRNITLGVPLVSAAMDTVTEARMAIAMARQGG 76

Query: 212 ------------KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
                       +   + V                    L +   + ++ R   V V D 
Sbjct: 77  IGVLQRNLPIDEQAAAVEVVKRSEAGMVTDPVTCAPDATLAEVDALCAKFRISGVPVTDA 136

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
              L GIIT  D+        ++  V +VM K P V  +       A+ LLR+H I  L 
Sbjct: 137 AGTLVGIITNRDMRFEVD---HSRPVSEVMTKAPLVTAQVGVSADAALGLLRRHKIEKLP 193

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           +VD   K  G++   D ++
Sbjct: 194 IVDGAGKLRGLITVKDFVK 212


>gi|149197351|ref|ZP_01874402.1| Signal-transduction protein [Lentisphaera araneosa HTCC2155]
 gi|149139369|gb|EDM27771.1| Signal-transduction protein [Lentisphaera araneosa HTCC2155]
          Length = 629

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 3/132 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           + + G +    F+  S        +   +    L +   I+S+  FG   V++E  KL G
Sbjct: 147 MRNRGNRNQEGFMQVSMKTACKRPLNFCQEHHSLSEVAKIMSDSDFGFCMVMNEQ-KLTG 205

Query: 266 IITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +I++ DI R+       ++    D+M KN K I +D  +  A+  + +H +S L  ++  
Sbjct: 206 VISDSDIRRSIAAGQPPSSTFASDIMTKNVKTIQDDYSVLEALLKMERHGLSHLPGINSD 265

Query: 324 QKAIGIVHFLDL 335
            +   ++  LDL
Sbjct: 266 GEVSAVLSALDL 277


>gi|149174954|ref|ZP_01853578.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797]
 gi|148846291|gb|EDL60630.1| Inosine-5-monophosphate dehydrogenase [Planctomyces maris DSM 8797]
          Length = 494

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          ++H         +    V  S   + +
Sbjct: 42  NVPIISSPMDTVTESDMAIGMAQEGGIG-----IIHKNMTAEQQAMLVDVVKRSEHGVIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  I+  +  G V V  +  KL GI+T  D+      D    S+ +V
Sbjct: 97  DPVTLPPEATVAEAAEIMKRRNIGGVPVT-KNGKLVGILTSRDLRFL---DTPDKSISEV 152

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+      EDT L  A ++L ++ +  L++VD+  +  G++   D+
Sbjct: 153 MTKDKLVTAKEDTTLEAAQRILLENKVEKLLLVDENYQLKGLITIKDI 200


>gi|283852413|ref|ZP_06369682.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283572151|gb|EFC20142.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 220

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 55/116 (47%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLN 281
           K G  ++ A  ++ E  F  + V+D+  +L GI+++ DI                +  L+
Sbjct: 15  KPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V D+M K    I  D  +  A  L+ ++N+S L VVD   K +G++   D+ +
Sbjct: 75  EIKVADIMTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDSKVVGVITDSDIFK 130



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M K+P      T +  A +L++++    L V+DD  +  GIV   D+   
Sbjct: 3   IKDWMSKSPVTAKPGTSIMKAAKLMKENGFHRLPVIDDNGRLAGIVSDRDIKEA 56



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  +     +  A  ++       + VVD   K+ G+IT+ DIF+  
Sbjct: 82  MTKKVIFIGPDDTVEKAAVLMLRNNVSGLPVVDGDSKVVGVITDSDIFKVL 132


>gi|257871369|ref|ZP_05651022.1| IMP dehydrogenase [Enterococcus gallinarum EG2]
 gi|257805533|gb|EEV34355.1| IMP dehydrogenase [Enterococcus gallinarum EG2]
          Length = 494

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AI++            V+H    +      
Sbjct: 32  VDMHVQLAKNITLNIPIMSASMDTVTDSKMAISMARQGGLG-----VIHKNMSIAAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPSHLVADAEHLMSKYRISGVPIVETMENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   ++++ DVM K   V     T L  A ++L++H I  L +VDD     G++  
Sbjct: 147 FVTD---YSIAISDVMTKEKLVTAPVGTSLKDAEKILQKHKIEKLPIVDDEGILSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|1002715|gb|AAA92086.1| similar to the inosine monophosphate dehydrogenase from Pyrococcus
           furiosus (SwissProt Accession Number P42851); orfX
           protein; Method: conceptual translation supplied by
           author [Methanopyrus kandleri]
          Length = 172

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 3/124 (2%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               S    +   +         ++    + E   G V +V+E  +  GIITE D+    
Sbjct: 1   MRTVSVGEVARRDVITGSPTETAVEIAYKMREHGIGSVVIVNEKDEPIGIITERDLVIKV 60

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               K+ + +   D+M +    + ED  +  A++L+    I  L +VDD  K IGIV   
Sbjct: 61  VSQGKNPDEVIARDIMSQPVITVEEDMEVNEAVKLMVDKGIRRLPIVDDNGKLIGIVTMQ 120

Query: 334 DLLR 337
           D+L+
Sbjct: 121 DILQ 124


>gi|70606966|ref|YP_255836.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68567614|gb|AAY80543.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 272

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 52/112 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     ++DA+TI+  +  G + V+D  +K+KGI+TE ++   F    +   V
Sbjct: 80  MSPKPAYVYEDDDVVDALTIMVARNLGSLPVIDVEKKVKGIVTEREMMLIFQDLDHVYPV 139

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              M K    I ED  +    +L+ +     L VVD   K +G++   D+L+
Sbjct: 140 SKFMTKRVTTIYEDMPVVEGAKLMVKRGFRRLPVVDTEGKLVGVITAADILK 191



 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  +    P+++   ++ ++ F  + VVD   KL G+IT  DI +NF K L+    
Sbjct: 143 MTKRVTTIYEDMPVVEGAKLMVKRGFRRLPVVDTEGKLVGVITAADILKNFLKHLSKNSL 202

Query: 283 -----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  ++D+   N   I  +  +  A   +    I  L+VVD+      IV   DL+
Sbjct: 203 DTFYYEKIKDIKTPNVHTIDPNKSINEAAAKMLLERIGSLIVVDNDNVPTAIVTERDLI 261



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                P++ +   L DA   ++ +  G V +VD+   L+GI++  D+             
Sbjct: 7   MLQDPPVLGLHDKLYDAFKRINTRGIGRVIIVDKS--LEGIVSTRDLISCIVDACEKTCN 64

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +L    +  VM   P  + ED  +  A+ ++   N+  L V+D  +K  GIV 
Sbjct: 65  QAQLYELLNKEISKVMSPKPAYVYEDDDVVDALTIMVARNLGSLPVIDVEKKVKGIVT 122



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 23/56 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
              ++  +     + +A   +  +R G + VVD       I+TE D+    H  L+
Sbjct: 214 KTPNVHTIDPNKSINEAAAKMLLERIGSLIVVDNDNVPTAIVTERDLIIALHYQLH 269


>gi|15678671|ref|NP_275786.1| hypothetical protein MTH644 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621725|gb|AAB85149.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 157

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 55/147 (37%), Gaps = 34/147 (23%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  VK    + DA  +L E R     VVDE  KL GII+EGDI R           
Sbjct: 8   MQSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMRLIEVHSPSLNL 67

Query: 278 --------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                     +    + VE++M      +     ++ A +L+ +
Sbjct: 68  IMPSPLDLLELPLRMKHEYDEIARGIRKAAVMRVEEIMTPKVVTVPPHASVSDAAELMER 127

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
           H+I  L V+D+  +  GI+   D++  
Sbjct: 128 HDIKRLPVIDENGRLAGIITRGDIIGA 154



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M  +   +   + +  A ++LR++ IS   VVD+  K +GI+   D++R 
Sbjct: 4   VKDAMQSDVITVKRTSSIHDAARVLRENRISGAPVVDEDGKLVGIISEGDIMRL 57



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V     + DA  ++       + V+DE  +L GIIT GDI   F K
Sbjct: 105 MTPKVVTVPPHASVSDAAELMERHDIKRLPVIDENGRLAGIITRGDIIGAFVK 157


>gi|146304862|ref|YP_001192178.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145703112|gb|ABP96254.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 300

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L DA  IL ++      V+DE   + GIIT  D+ R F++     +V D M ++ 
Sbjct: 186 KPNMSLRDASRILHKEGIRGAPVLDESGNVIGIITTADLMRAFYEGNFDATVSDYMKRDV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I E+  +  A++ +  +N+  L+V+D   +  G+V   D+L+   G+
Sbjct: 246 ITIKEEDDIMEAVKKMVTYNVGRLVVMDAINRVTGMVTRTDILKSIAGL 294



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ R     +    V++++ K    +  +  L  A ++L +  I    V+D+    IGI+
Sbjct: 162 DVKRMIS--IPKEKVKNIIGKRLVSLKPNMSLRDASRILHKEGIRGAPVLDESGNVIGII 219

Query: 331 HFLDLLRF 338
              DL+R 
Sbjct: 220 TTADLMRA 227


>gi|19552508|ref|NP_600510.1| signal-transduction protein [Corynebacterium glutamicum ATCC 13032]
 gi|62390174|ref|YP_225576.1| signal transduction protein [Corynebacterium glutamicum ATCC 13032]
 gi|21324056|dbj|BAB98681.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Corynebacterium glutamicum ATCC 13032]
 gi|41325510|emb|CAF19990.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domain [Corynebacterium glutamicum ATCC 13032]
          Length = 622

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
                 ++DA   + E     + V     +LKGIIT+ D+  R   KDL+  L V +VM 
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLV-QIDGELKGIITDRDMRSRVVAKDLDIQLPVSEVMT 226

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P+      L   AM L+ +  I  L +VDD  +  GIV   D++R 
Sbjct: 227 VDPRCATSQGLAFEAMLLMSELRIHHLPIVDD-GQISGIVTAADIMRL 273



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +A+ ++SE R   + +VD+  ++ GI+T  DI R    D   L+ +
Sbjct: 240 EAMLLMSELRIHHLPIVDD-GQISGIVTAADIMRLLRHDPIYLTAD 284



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + +     +    + +  I NP     DT +  A   + +  +S L+V     +  GI+ 
Sbjct: 144 LRQESSSKVLRTKLGEFKIANPISCSPDTTIMDAAIKMDEFGVSSLLV-QIDGELKGIIT 202

Query: 332 FLDLLRFGII 341
             D+ R  ++
Sbjct: 203 DRDM-RSRVV 211


>gi|295696937|ref|YP_003590175.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
 gi|295412539|gb|ADG07031.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
          Length = 139

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/113 (33%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +  V       DA  ++++   G V VVD+  KL GI T+ DI        KD  T
Sbjct: 7   MTTQVSYVSPASTCKDAARVMNDINVGSVPVVDKD-KLVGICTDRDIVLKCIAAGKDPAT 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V+D M  NP     D     A  L+ QH I  L VVD   K +G+V   DL
Sbjct: 66  TAVKDCMTANPITGTPDMDAHQASDLMSQHQIRRLPVVD-QGKLVGMVAIGDL 117



 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++D+M      +   +    A +++   N+  + VVD   K +GI    D++
Sbjct: 1   MKLKDLMTTQVSYVSPASTCKDAARVMNDINVGSVPVVDKD-KLVGICTDRDIV 53


>gi|319945992|ref|ZP_08020241.1| inosine-5'-monophosphate dehydrogenase [Streptococcus australis
           ATCC 700641]
 gi|319747800|gb|EFW00045.1| inosine-5'-monophosphate dehydrogenase [Streptococcus australis
           ATCC 700641]
          Length = 495

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 47  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 102 DPFFLTPEHTIAEADELMGRYRISGVPVVETMENRKLVGILTNRDLRFISDYD---QPIS 158

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 159 NHMTSENLVTAPVGTDLETAERILQEHRIEKLPLVDENGRLSGLITIKDI 208


>gi|227485807|ref|ZP_03916123.1| IMP dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
 gi|227236185|gb|EEI86200.1| IMP dehydrogenase [Anaerococcus lactolyticus ATCC 51172]
          Length = 483

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 40  NIPLMSASMDTVTEYEMAIAMARQGGIG-----IIHKNMSIEEQAAQVDRVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA+ I++  R   V +VD+   LKGI+T  D+     +D  ++ ++D+
Sbjct: 95  DPFYLHPYNNLGDALDIMAHYRISGVPIVDDDMCLKGILTNRDVRF---QDDESVLIDDI 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N  +  E   +  A++ +    +  L +V+D  K  G++   D+
Sbjct: 152 MTKDNLILGKEGISMEDAIKKMESGKVEKLPIVNDEGKLKGLITIKDI 199


>gi|218295136|ref|ZP_03495972.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
 gi|218244339|gb|EED10864.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
          Length = 210

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 57/118 (48%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           V    P+++AI +L +K+F  + VV +  KL G++T+ D+                   L
Sbjct: 14  VSPDTPVLEAINLLKQKKFRRLPVV-KDGKLLGLVTDKDLKDAMPSKATTLSVWEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L+VE+VM K    I  D  L  A  ++ +  I  L V+ +  K +GI+   D+LR 
Sbjct: 73  SKLTVEEVMAKPVITIGADEPLEKAALIMEEKKIGGLPVM-EGDKLVGIITVTDVLRA 129



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M K+P  +  DT +  A+ LL+Q     L VV    K +G+V   DL
Sbjct: 3   VRDWMTKDPLTVSPDTPVLEAINLLKQKKFRRLPVV-KDGKLLGLVTDKDL 52



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
               +  +    PL  A  I+ EK+ G + V+ EG KL GIIT  D+ R F + L
Sbjct: 81  MAKPVITIGADEPLEKAALIMEEKKIGGLPVM-EGDKLVGIITVTDVLRAFIEML 134


>gi|300934270|ref|ZP_07149526.1| hypothetical protein CresD4_09379 [Corynebacterium resistens DSM
           45100]
          Length = 617

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
              + DA  ++++ R   + ++D   KL GI+T+ D+ +    +   + +V ++M K   
Sbjct: 168 TTSVQDAAKMMNDLRVSSLLIIDND-KLVGIVTDRDMRKVVANNTPVSTTVAEIMPKKLV 226

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               DT++  AM L+ + +I  L VVDD  +  GIV   D++R 
Sbjct: 227 TRSSDTVVIEAMVLMAERDIHHLPVVDD-GRVTGIVTAADIMRL 269



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 3/70 (4%)

Query: 212 KLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           K+       S  +       LV       +I+A+ +++E+    + VVD+  ++ GI+T 
Sbjct: 205 KVVANNTPVSTTVAEIMPKKLVTRSSDTVVIEAMVLMAERDIHHLPVVDD-GRVTGIVTA 263

Query: 270 GDIFRNFHKD 279
            DI R    D
Sbjct: 264 ADIMRLLKHD 273



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +    I++P      T +  A +++    +S L+++D+  K +GIV   D+ +
Sbjct: 149 VLRTKLGQFAIEDPANTGSTTSVQDAAKMMNDLRVSSLLIIDND-KLVGIVTDRDMRK 205


>gi|119357429|ref|YP_912073.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides
           DSM 266]
 gi|119354778|gb|ABL65649.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides
           DSM 266]
          Length = 497

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 70/175 (40%), Gaps = 16/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  +        +  +     ++  +    S ++ +  ++
Sbjct: 41  NIPMVSAAMDTVTESRLAIALARAGGIGIIHKNLTIEDQAREVARVKRYESGIIRNPFTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTL 283
                   + DA+ ++ +     + VV       D   KLKGI+T  D+     K     
Sbjct: 101 ---FEDATMQDALDLMYKHSISGIPVVEHPKAEGDACMKLKGIVTNRDLR---IKPALDA 154

Query: 284 SVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +M  KN     ED  L  A Q+L ++ I  L++ DD    +G++ F D+ +
Sbjct: 155 KISTIMTSKNLITAREDISLEKAEQILLKNKIEKLLITDDEGNLLGLITFKDIQK 209


>gi|24374804|ref|NP_718847.1| inositol-5-monophosphate dehydrogenase [Shewanella oneidensis MR-1]
 gi|24349481|gb|AAN56291.1|AE015766_7 inosine-5'-monophosphate dehydrogenase [Shewanella oneidensis MR-1]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   + ++  F    VV++  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTAKNGFAGYPVVNDANELIGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  H I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSHRIEKVLVVDDNFKLKGLITVKDFEKA 204


>gi|28210105|ref|NP_781049.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
           tetani E88]
 gi|28202541|gb|AAO34986.1| inosine-5-monophosphate dehydrogenase related protein [Clostridium
           tetani E88]
          Length = 143

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMI 290
           +    +  A  ++ E   G + + +E  K+ GIIT+ DI        + +   +V ++M 
Sbjct: 15  QAEDTVEHAAQLMKEHGVGSLPICNE-GKIVGIITDRDIALRSVAMGESIQNQTVRNIMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            NP  +  +   T A +++ +  I  L VV++    +G+V   D+
Sbjct: 74  SNPITVSPNISATEAAEIMSKKQIRRLPVVENKN-LVGMVSLGDI 117



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + ++M K+   +  +  +  A QL+++H +  L + ++  K +GI+   D+
Sbjct: 1   MKINNIMTKDIVSLQAEDTVEHAAQLMKEHGVGSLPICNE-GKIVGIITDRDI 52



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 3/74 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D  +               ++M S      V       +A  I+S+K+   + VV 
Sbjct: 47  ITDRDIALRSVAMGESIQNQTVRNIMTSNPIT--VSPNISATEAAEIMSKKQIRRLPVV- 103

Query: 259 EGQKLKGIITEGDI 272
           E + L G+++ GDI
Sbjct: 104 ENKNLVGMVSLGDI 117


>gi|147677653|ref|YP_001211868.1| hypothetical protein PTH_1318 [Pelotomaculum thermopropionicum SI]
 gi|146273750|dbj|BAF59499.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIAL            V+H    +    +    V  S      
Sbjct: 43  NIPIVSAGMDTVTESRMAIALAREGGIG-----VIHKNMSIERQALEVDRVKRSEHGVIS 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++   R   + +  +  +L GI+T  D+   F +D  T  + +V
Sbjct: 98  DPIFLSPDDLISDALVLMERYRISGIPITVK-GRLVGILTNRDLR--FERDF-TKKIGEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++LRQ+ +  L +VD+     G++   D+
Sbjct: 154 MTKENLVTAPVGTTLEQAKEILRQYKVEKLPIVDEHYNLRGLITIKDI 201


>gi|303244451|ref|ZP_07330786.1| protein of unknown function DUF39 [Methanothermococcus okinawensis
           IH1]
 gi|302485149|gb|EFL48078.1| protein of unknown function DUF39 [Methanothermococcus okinawensis
           IH1]
          Length = 512

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 2/112 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                +V     + +A  IL E     + +VDE   L GI+T  DI R   +  N  S+ 
Sbjct: 396 RKPPIVVNCNITIDEASKILIENNINHLPIVDENNMLIGILTSWDIARAVAQ--NKKSIS 453

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M +N      D  + V  + + ++NIS + VVD   + +G+V   DL + 
Sbjct: 454 EIMTRNIISSTVDEPIDVVARKMSRNNISGVPVVDKNGRVLGVVTAEDLSKL 505



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D++ K P V+  +  +  A ++L ++NI+ L +VD+    IGI+   D+ R 
Sbjct: 391 VGDIIRKPPIVVNCNITIDEASKILIENNINHLPIVDENNMLIGILTSWDIARA 444



 Score = 39.1 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 2/72 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +       S++M        V    P+      +S      V VVD+  ++ G++T 
Sbjct: 442 ARAVAQNKKSISEIMTRNIISSTV--DEPIDVVARKMSRNNISGVPVVDKNGRVLGVVTA 499

Query: 270 GDIFRNFHKDLN 281
            D+ +     + 
Sbjct: 500 EDLSKLIGMRMK 511


>gi|300932934|ref|ZP_07148190.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium resistens
           DSM 45100]
          Length = 510

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 63/173 (36%), Gaps = 19/173 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +A+A+          RN S  D        +   + +       
Sbjct: 54  NIPIASAAMDTVTEARMAVAMARQGGIGVLHRNLSIED--------QAQQVEIVKRSEAG 105

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                        + +   + +  R   + V D+   L GIIT  D+   F  D     V
Sbjct: 106 MVTDPVTASPEMTIREVDELCARFRISGLPVTDDEGVLVGIITNRDMR--FEPDF-ERPV 162

Query: 286 EDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM K P V+ E+      A++LL ++ +  L +VD   K +G++   D  +
Sbjct: 163 NEVMTKAPLVVAEEGVSTEAALRLLSENKVEKLPIVDGAGKLVGLITVKDFAK 215


>gi|255003909|ref|ZP_05278710.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Virginia]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI+L +           +H    +         V         
Sbjct: 37  RIPIMSAAMDTVTESRLAISLAQHGG-----MGCIHKNLSIERQVAEVQKVKKHESWIVS 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L  A++++ +  +  + VV  +  KL GI+T  D+    +K+     V D
Sbjct: 92  NPVTVSPDATLSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDVRFVENKNC---KVSD 148

Query: 288 VMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 149 IMTSTNLVTVSEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 200


>gi|322708062|gb|EFY99639.1| ribosomal protein subunit S4 [Metarhizium anisopliae ARSEF 23]
          Length = 666

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+  R          +++ D+
Sbjct: 94  QIKPQTTVSEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGHKAANITIADI 153

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 154 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 197



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 47/113 (41%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+    SV
Sbjct: 261 PPTTVSVRTSVKEAAALMKENHTTAVLVQDA-GAITGIFTSKDVVLRVIAPGLDPANCSV 319

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 320 VRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNDGGEIVGMV---DVLKL 369


>gi|254994667|ref|ZP_05276857.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Mississippi]
 gi|255002775|ref|ZP_05277739.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Puerto Rico]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI+L +           +H    +         V         
Sbjct: 37  RIPIMSAAMDTVTESRLAISLAQHGG-----MGCIHKNLSIERQVAEVQKVKKHESWIVS 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L  A++++ +  +  + VV  +  KL GI+T  D+    +K+     V D
Sbjct: 92  NPVTVSPDATLSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDVRFVENKNC---KVSD 148

Query: 288 VMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 149 IMTSTNLVTVSEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 200


>gi|164422735|ref|XP_001727992.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
           OR74A]
 gi|157069798|gb|EDO64901.1| mitochondrial ribosomal protein subunit S4 [Neurospora crassa
           OR74A]
          Length = 610

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     L  NT+++ ++
Sbjct: 36  QIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGIFTAKDLAFRVVGGGLKANTVTIAEI 95

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   GI+  
Sbjct: 96  MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGILDI 139



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A  ++ E     V V D    + GI T  D+  R     L+  T SV
Sbjct: 203 PPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKDVVLRVIAPGLDPATCSV 261

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V++D  + +G+V   D+L+ 
Sbjct: 262 VRVMTPHPDFAPMDMTIQAALRKMHDGHYLNLPVMNDAGEIVGMV---DVLKL 311



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 40/242 (16%), Positives = 76/242 (31%), Gaps = 55/242 (22%)

Query: 144 ITSENKSVVACHADIVLTLPKEP--ESCPHGLAPTTSAIMQLAIGDALAIALLESRN--- 198
           +TS  +         VL L   P  +          + +M     D + +   + R    
Sbjct: 11  LTSRARHTRKAPPGTVLALKPSPALQIKAATTVSEAAQLMAAKREDCVLVTDDDERIAGI 70

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      GG L    V  +++M         +      DA+ ++  K F  + V+D
Sbjct: 71  FTAKDLAFRVVGGGLKANTVTIAEIMTKNPLCA--RTDTSATDALDLMVRKGFRHLPVMD 128

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-------------------------- 292
           E Q + GI+   DI + F+  +  L       +                           
Sbjct: 129 ENQDISGIL---DITKCFYDAMEKLERAYASSRRLYDALEGVQSELGTSQPQQIIQYVEA 185

Query: 293 ------------------PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                             P  +   T +  A QL+++++ + ++V D      GI    D
Sbjct: 186 LRSKMSGPTLESVLNGIPPTTVSVRTSVKEAAQLMKENHTTAVLVQD-QGAITGIFTSKD 244

Query: 335 LL 336
           ++
Sbjct: 245 VV 246


>gi|312140826|ref|YP_004008162.1| imp dehydrogenase guab [Rhodococcus equi 103S]
 gi|311890165|emb|CBH49483.1| IMP dehydrogenase GuaB [Rhodococcus equi 103S]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  S+ M       +AI++  +         VLH    +         V  S       
Sbjct: 37  VPLVSSAMDTVTEARMAISMARAGG-----MGVLHRNSSVEAQSGWVETVKRSEAGMVTD 91

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
               K    + D   + +  R   + V ++  +L GIIT  D+     ++     V +VM
Sbjct: 92  PVTCKPTDTIADVEAMCARFRISGLPVANDAGELVGIITNRDMQFEVDQN---RQVAEVM 148

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K P     E     VA+ LLR+H +  L +VD   K  G++   D ++
Sbjct: 149 TKAPLITAREGVTAEVALGLLRRHKVEKLPIVDGQGKLTGLITVKDFVK 197


>gi|56459687|ref|YP_154968.1| inosine 5'-monophosphate dehydrogenase [Idiomarina loihiensis L2TR]
 gi|56178697|gb|AAV81419.1| IMP dehydrogenase [Idiomarina loihiensis L2TR]
          Length = 489

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      ALAIAL +     F   +         +  +    S ++      
Sbjct: 41  NIPLVSAAMDTVTESALAIALAQEGGLGFIHKNMTAEQQAAHVRKVKKYESGMV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + +   + +E  F    VV+    L GI+T  D      +D ++  +  VM 
Sbjct: 98  VTVRPTTTIGEIKKLTAEHGFQGFPVVEGNGDLVGIVTGRDTRF---EDDDSKEIRHVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N     + E       +QL+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 GNDRLVTVHETAESEEILQLMHKHRIEKILVVDDAHKLKGMITLKDFEKA 204


>gi|167626382|ref|YP_001676882.1| malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|241668813|ref|ZP_04756391.1| malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25015]
 gi|254877345|ref|ZP_05250055.1| inosine-5'-monophosphate dehydrogenase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
 gi|167596383|gb|ABZ86381.1| Malate dehydrogenase [Francisella philomiragia subsp. philomiragia
           ATCC 25017]
 gi|254843366|gb|EET21780.1| inosine-5'-monophosphate dehydrogenase [Francisella philomiragia
           subsp. philomiragia ATCC 25015]
          Length = 486

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+   + GI+T+ D    F KDL+   V  +
Sbjct: 96  DPITIKQESSIKEVMQLAKEHNFSGFPVVDDNNMIIGIVTKRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPREQLVTVAEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPREQLVTVAEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|85710353|ref|ZP_01041418.1| CBS domain protein [Erythrobacter sp. NAP1]
 gi|85689063|gb|EAQ29067.1| CBS domain protein [Erythrobacter sp. NAP1]
          Length = 620

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/179 (20%), Positives = 65/179 (36%), Gaps = 15/179 (8%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           LP +        +P  ++         L  AL + R             G   ++     
Sbjct: 107 LPAQQFHALREGSPGFASFFDDDQAARLKHALEQRRE------------GSAFSIKSRQV 154

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL- 280
             + +  +     +  P+  A+ I+ E     +A+ D    L GI T+ DI +    D  
Sbjct: 155 GELIARAAPVTCPLDAPISSAVAIMVEHDVSTLAICD-NGALAGIFTDKDIRKRVVADAV 213

Query: 281 -NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  VM  NP+ + + + +  AM L+       L ++DD    +GIV   D+L  
Sbjct: 214 PFDHPISAVMTANPRTLPQHSPIAEAMALMASGGFRHLPILDDSGALMGIVSATDILAA 272



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 54/140 (38%), Gaps = 13/140 (9%)

Query: 174 APTTSAIMQLAIGDALAIALLE----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           AP +SA+  +   D   +A+ +    +  F++ D                 S VM    +
Sbjct: 170 APISSAVAIMVEHDVSTLAICDNGALAGIFTDKDIRK-RVVADAVPFDHPISAVM--TAN 226

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +    P+ +A+ +++   F  + ++D+   L GI++  DI      +        +M
Sbjct: 227 PRTLPQHSPIAEAMALMASGGFRHLPILDDSGALMGIVSATDILAAIGSNAID---AGMM 283

Query: 290 IKNPKVILEDTLLTVAMQLL 309
           I   K   +   L  A +L+
Sbjct: 284 IAKAKTASQ---LIEACRLI 300


>gi|300814048|ref|ZP_07094332.1| putative inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp.
           oral taxon 836 str. F0141]
 gi|300511840|gb|EFK39056.1| putative inosine-5'-monophosphate dehydrogenase [Peptoniphilus sp.
           oral taxon 836 str. F0141]
          Length = 263

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       ++IA+            ++H    +    +    V  S   +  
Sbjct: 40  NIPLMSAGMDTVTEYRMSIAMAREGGIG-----IIHKNMSIKEQALEVDKVKRSEHGVIT 94

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++   +   V ++D+  +L+GIIT  DI   F  D N   +++V
Sbjct: 95  DPFSLSKNHTIGDASELMERYKISGVPIIDDKGRLEGIITNRDIR--FETD-NKRKIKEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N         L  A+++L+ H I  L +VD      G++   D+
Sbjct: 152 MTSENLITGTPGISLEEALKILKGHKIEKLPLVDKNNILKGLITIKDI 199


>gi|288930562|ref|YP_003434622.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288892810|gb|ADC64347.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 349

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D + ++ E++     VV +  ++ GI+T  DI     KD NT  VE+VM +N
Sbjct: 239 VTPDMTVGDVLKLMFERKHLGYPVV-KNGEVVGIVTLHDI---VGKDENT-KVEEVMTRN 293

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  DT +  A+++L    I  L+VV +  K +GI+   D+++ 
Sbjct: 294 VITVTPDTPMIDALRILASSGIGRLVVV-ENGKLVGILTRTDIVKA 338



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFL 333
               L+   V D+M ++   +  D  +   ++L+ +     L   VV    + +GIV   
Sbjct: 219 IESLLSRFKVGDLMTRDVVAVTPDMTVGDVLKLMFERK--HLGYPVV-KNGEVVGIVTLH 275

Query: 334 DLL 336
           D++
Sbjct: 276 DIV 278



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              ++  V    P+IDA+ IL+    G + VV E  KL GI+T  DI +   
Sbjct: 290 MTRNVITVTPDTPMIDALRILASSGIGRLVVV-ENGKLVGILTRTDIVKAVE 340


>gi|317154159|ref|YP_004122207.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio aespoeensis
           Aspo-2]
 gi|316944410|gb|ADU63461.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio aespoeensis
           Aspo-2]
          Length = 484

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/165 (24%), Positives = 67/165 (40%), Gaps = 8/165 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  +R+      +      +                + PL
Sbjct: 41  NIPLISAAMDTVTESRMAISM--ARHGGAGVIHKNMSVREQAREIDRVKKSESGMITDPL 98

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI- 290
            V     L     I++E R   + VV +G  L GIIT  DI   F +D + L V ++M  
Sbjct: 99  TVHPDDDLGKVKAIMAEYRISGLPVV-KGDHLVGIITNRDIR--FVRDDSAL-VSELMTS 154

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++   + E+     A + L QH I  L+VVD   +  G++   D+
Sbjct: 155 RDLVTVPENIDNEEAKRKLHQHRIEKLLVVDSENRLKGLITIKDI 199


>gi|298492601|ref|YP_003722778.1| polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
 gi|298234519|gb|ADI65655.1| Polynucleotide adenylyltransferase region ['Nostoc azollae' 0708]
          Length = 907

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A   L       ++VV++  K+ GII+  D+    H   +   V
Sbjct: 320 MSSPVRTIRPETTISEAQKTLLRYGHSGLSVVNDQDKIVGIISRRDLDIALHHGFSHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M  N K I  DT+L     L+  ++I  L V+++    +GIV   D+LR 
Sbjct: 380 KGYMTTNLKTITPDTILPQIGSLMVTYDIGRLPVLENGN-LVGIVTRTDVLRE 431



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D+M    + I  +T ++ A + L ++  S L VV+D  K +GI+   DL
Sbjct: 315 TARDLMSSPVRTIRPETTISEAQKTLLRYGHSGLSVVNDQDKIVGIISRRDL 366



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   ++  +     L    +++     G + V+ E   L GI+T  D
Sbjct: 369 ALHHGFSHAPVKGYMTTNLKTITPDTILPQIGSLMVTYDIGRLPVL-ENGNLVGIVTRTD 427

Query: 272 IFRNFHKDLNTLS 284
           + R  H+  N  +
Sbjct: 428 VLREIHQAENQNT 440


>gi|91772371|ref|YP_565063.1| hypothetical protein Mbur_0311 [Methanococcoides burtonii DSM 6242]
 gi|91711386|gb|ABE51313.1| CBS-domain and DUF39-domain containing protein [Methanococcoides
           burtonii DSM 6242]
          Length = 500

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +++      DA   + +K+F  + VVD+   L GI+T  DI +   K    L V
Sbjct: 384 MTSDVSIIQAEASFNDAAKTIMDKQFSHLPVVDKDNSLVGIVTAWDISKAVAKAEYDL-V 442

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M K+      D  + +A   L  +N+S L V+D  ++ +GI+   D+ + 
Sbjct: 443 KDIMTKDVVTTSPDEAIDIAAFKLDSNNVSALPVIDAKKQVVGIITSDDISKL 495



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 23/54 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M  +  +I  +     A + +     S L VVD     +GIV   D+ + 
Sbjct: 380 VGDIMTSDVSIIQAEASFNDAAKTIMDKQFSHLPVVDKDNSLVGIVTAWDISKA 433


>gi|291278884|ref|YP_003495719.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
           SSM1]
 gi|290753586|dbj|BAI79963.1| inosine-5'-monophosphate dehydrogenase [Deferribacter desulfuricans
           SSM1]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +           +H    +         V  S   + +
Sbjct: 42  NIPIVSAAMDTVTEARMAIAIAQEGGLG-----FIHKNMSIEEQAEEVDKVKRSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + DA+ ++++ +   + VV +G KL GIIT  D+         T  VE  
Sbjct: 97  DPITIEPEKTVQDALDLMAKYKISGIPVV-KGHKLVGIITNRDLRFVTD---YTGKVEKY 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N   +   T L  A + L++H I  L+VVDD  +  G++   D+
Sbjct: 153 MTKENLVTVPVGTSLEEAKEHLQKHRIEKLLVVDDNFELKGLITIKDI 200



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + +++  V +G  L +A   L + R   + VVD+  +LKG+IT  DI +  
Sbjct: 152 YMTKENLVTVPVGTSLEEAKEHLQKHRIEKLLVVDDNFELKGLITIKDINKKL 204


>gi|255935165|ref|XP_002558609.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583229|emb|CAP91233.1| Pc13g01640 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 615

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDV 288
            +K    + +A  +++ KR  CV V D+ +++ GI T  D+  R     L    +SV ++
Sbjct: 58  QIKPSMSIAEAAQLMAAKREDCVLVTDDNERIAGIFTAKDLAFRVVGLGLKAREVSVAEI 117

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 118 MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 161



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 225 PPVTVSVRTTVKDAAALMKENHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCSV 283

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P     D  +  A++ +   +   L V+++  + +G+V   D+L+ 
Sbjct: 284 VRVMTPHPDFAPSDMSIQAALRKMHDGHYLNLPVMNEGGEIVGMV---DVLKL 333


>gi|56416435|ref|YP_153509.1| inosine monophosphate dehydrogenase [Anaplasma marginale str. St.
           Maries]
 gi|56387667|gb|AAV86254.1| inosine monophosphate dehydrogenase [Anaplasma marginale str. St.
           Maries]
          Length = 493

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI+L +           +H    +         V         
Sbjct: 42  RIPIMSAAMDTVTESRLAISLAQHGG-----MGCIHKNLSIERQVAEVQKVKKHESWIVS 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L  A++++ +  +  + VV  +  KL GI+T  D+      D       D
Sbjct: 97  NPVTVSPDATLSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDVRFV---DNKNCKASD 153

Query: 288 VMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 154 IMTSTNLVTVSEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 205


>gi|291276969|ref|YP_003516741.1| inosine-5'-monophosphate dehydrogenase [Helicobacter mustelae
           12198]
 gi|290964163|emb|CBG40008.1| inosine-5'-monophosphate dehydrogenase [Helicobacter mustelae
           12198]
          Length = 481

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 8/170 (4%)

Query: 170 PHGLAPTTSAIMQLA-IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           P  +   ++A+  +     A+A+A L        +  V     ++  +    S ++    
Sbjct: 38  PLNIPFISAAMDTVTEYKTAIAMARLGGIGIIHKNMDVESQVKEIRKVKKSESGII---V 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I    +   V VVD    L GI+T  D+   F  DL+   V ++
Sbjct: 95  DPIFIHADKTLADAKKITDNYKISGVPVVDSQGILIGILTNRDMR--FEMDLDK-KVGEI 151

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P +       L  A +++ ++ I  L +VD  QK  G++   D+ +
Sbjct: 152 MTKAPLITAPVGIDLDQAREIMHKNRIEKLPIVDQNQKLRGLITIKDIQK 201


>gi|222474805|ref|YP_002563220.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Florida]
 gi|222418941|gb|ACM48964.1| inosine monophosphate dehydrogenase (guaB) [Anaplasma marginale
           str. Florida]
          Length = 493

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI+L +           +H    +         V         
Sbjct: 42  RIPIMSAAMDTVTESRLAISLAQHGG-----MGCIHKNLSIERQVAEVQKVKKHESWIVS 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L  A++++ +  +  + VV  +  KL GI+T  D+    +K+     V D
Sbjct: 97  NPVTVSPDATLSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDVRFVENKNC---KVSD 153

Query: 288 VMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 154 IMTSTNLVTVSEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 205


>gi|126175186|ref|YP_001051335.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS155]
 gi|153001512|ref|YP_001367193.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS185]
 gi|160876248|ref|YP_001555564.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS195]
 gi|125998391|gb|ABN62466.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS155]
 gi|151366130|gb|ABS09130.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS185]
 gi|160861770|gb|ABX50304.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS195]
 gi|315268437|gb|ADT95290.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS678]
          Length = 488

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +  +  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  H I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKA 204


>gi|94968288|ref|YP_590336.1| inosine-5'-monophosphate dehydrogenase [Candidatus Koribacter
           versatilis Ellin345]
 gi|94550338|gb|ABF40262.1| inosine-5'-monophosphate dehydrogenase [Candidatus Koribacter
           versatilis Ellin345]
          Length = 499

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL +          ++H    +         V  S   + +
Sbjct: 42  NIPLISAAMDTVTESRMAIALAQQGGLG-----IVHRNLTIEQQAGEIDKVKRSESGMIV 96

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             I       + +A+ ++   R   V V  + +KL GI+T  D+      D+    + +V
Sbjct: 97  DPITMSPENKISEALDVMKRYRISGVPVT-KNKKLVGILTNRDLRFETRTDI---PISEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   +   T L  A ++L QH +  L+VVDD  +  G++   D+ + 
Sbjct: 153 MTKENLITVPVGTTLEDAEEILHQHRVEKLLVVDDRYELKGLITVKDIQKK 203



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            + +++  V +G  L DA  IL + R   + VVD+  +LKG+IT  DI +  
Sbjct: 153 MTKENLITVPVGTTLEDAEEILHQHRVEKLLVVDDRYELKGLITVKDIQKKL 204


>gi|238784192|ref|ZP_04628205.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           bercovieri ATCC 43970]
 gi|238714901|gb|EEQ06900.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           bercovieri ATCC 43970]
          Length = 280

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK    +L ++L      +   A+E ++A + R+++TGIG S
Sbjct: 85  NQILSTDSLKTVGEKLLSEKAA--ALRATLDINSEQRLTQALEMLRAAR-RIILTGIGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFSPNSLQQRADHCLYT--ISEEPVIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|261338129|ref|ZP_05966013.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium gallicum
           DSM 20093]
 gi|270276757|gb|EFA22611.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium gallicum
           DSM 20093]
          Length = 507

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 4/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             PT SA M       +AIA+  +RN      +                       + PL
Sbjct: 51  KVPTISAAMDTVTEAEMAIAM--ARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMITNPL 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +  +     + VVD   KL GIIT  D+     +D + L V D+M +
Sbjct: 109 TVSPDVTLADLDKLCGKFHISGLPVVDNEGKLVGIITNRDMRFIASEDYDHLRVRDIMTR 168

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            N      +     A  LL +H +  L +VD+  K  G++   D ++
Sbjct: 169 DNLITGPSNISKEDAHDLLAKHKVEKLPLVDESGKLTGLITVKDFVK 215


>gi|15644106|ref|NP_229155.1| inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           maritima MSB8]
 gi|148270558|ref|YP_001245018.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga petrophila RKU-1]
 gi|170289264|ref|YP_001739502.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga sp. RQ2]
 gi|4981914|gb|AAD36425.1|AE001789_10 inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           maritima MSB8]
 gi|147736102|gb|ABQ47442.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga petrophila RKU-1]
 gi|170176767|gb|ACB09819.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Thermotoga sp. RQ2]
          Length = 321

 Score = 94.6 bits (234), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 5/135 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +L  +F            +  V     L+    I+  KR   V VVD+ +++ GI++  D
Sbjct: 8   RLQAIFQDVRVSEFMNPDVIYVTPDKTLLHVKEIMRIKRISGVPVVDDKKRVVGIVSLED 67

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I +         SVE  M KN   + E   L  A++   ++      VVDD  K +GIV 
Sbjct: 68  IIKALEGSYIKDSVEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDEGKLVGIVT 127

Query: 332 FLDLL-----RFGII 341
             D++     + GI+
Sbjct: 128 KHDIIYFLLAKLGIM 142



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L   ++  S       ++  +K    L DA+    +  +G   VVD+  KL GI+T+ 
Sbjct: 70  KALEGSYIKDSVEKRMTKNVVCLKETDTLQDAVKTFEKYGYGRFPVVDDEGKLVGIVTKH 129

Query: 271 DI 272
           DI
Sbjct: 130 DI 131


>gi|297802578|ref|XP_002869173.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315009|gb|EFH45432.1| hypothetical protein ARALYDRAFT_491262 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 237

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 32/161 (19%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P    G       D M    ++ +VK    + DA+ +L EK+   + V+D+   L G+++
Sbjct: 70  PAKNGG---YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 126

Query: 269 EGDIF------------RNFHKDLNTL-----------------SVEDVMIKNPKVILED 299
           + D+              N   D+++                   V D+M  +P V+ + 
Sbjct: 127 DYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDS 186

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T L  A +LL +     L VVD   K IGI+   +++R  +
Sbjct: 187 TNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 227


>gi|121535780|ref|ZP_01667581.1| inosine-5'-monophosphate dehydrogenase [Thermosinus carboxydivorans
           Nor1]
 gi|121305612|gb|EAX46553.1| inosine-5'-monophosphate dehydrogenase [Thermosinus carboxydivorans
           Nor1]
          Length = 484

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   I +
Sbjct: 43  NIPIISSGMDTVTEARMAIAMAREGGLG-----VIHKNMSIERQANEIDKVKRSEHGIIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V V D+  KL GI+T  D+   F  DL    + + 
Sbjct: 98  DPIFLSPENTLQDAHDLMEKYRISGVPVTDK-GKLVGILTNRDLR--FETDLRR-KIREC 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   +       T L  A ++LRQH I  L +VD+     G++   D+ + 
Sbjct: 154 MTHEHLITAPVGTSLEQAKEILRQHRIEKLPLVDEHGNLKGLITIKDIEKA 204


>gi|217972559|ref|YP_002357310.1| inosine 5'-monophosphate dehydrogenase [Shewanella baltica OS223]
 gi|217497694|gb|ACK45887.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS223]
          Length = 488

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +  +  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  H I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKA 204


>gi|156741986|ref|YP_001432115.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156233314|gb|ABU58097.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 143

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 65/129 (50%), Gaps = 11/129 (8%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             SDVMH G     V    P+ +A+ ++ E R   + +VD    L GI+++ D+ R + +
Sbjct: 5   RVSDVMHYGVISCRV--ETPVEEALALMQEHRIHALVIVDGPGYLAGIVSQTDLLRAWKE 62

Query: 279 D-----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQK--AIGI 329
                 +    V D+M ++    + +  L  A+QLL +++I  L+VV++    +   IG+
Sbjct: 63  GSSFEAVMRGPVGDIMTRSVVTCMPEMELDRAIQLLNRNHIHRLVVVEERNDGRFWPIGV 122

Query: 330 VHFLDLLRF 338
           +   D++R 
Sbjct: 123 LSMTDIVRA 131



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V DVM         +T +  A+ L+++H I  L++VD      GIV   DLLR 
Sbjct: 1   MEHKRVSDVMHYGVISCRVETPVEEALALMQEHRIHALVIVDGPGYLAGIVSQTDLLRA 59


>gi|304410029|ref|ZP_07391648.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS183]
 gi|307302258|ref|ZP_07582016.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica BA175]
 gi|304351438|gb|EFM15837.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica OS183]
 gi|306914296|gb|EFN44717.1| inosine-5'-monophosphate dehydrogenase [Shewanella baltica BA175]
          Length = 488

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +  +  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  H I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSHRIEKVLVVDDNYKLKGLITVKDFEKA 204


>gi|238796740|ref|ZP_04640246.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           mollaretii ATCC 43969]
 gi|238719471|gb|EEQ11281.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           mollaretii ATCC 43969]
          Length = 280

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK    +L ++L      +   A+E ++A + R+++TGIG S
Sbjct: 85  NQILSTDSLKTVGEKLLSEKAA--ALRATLDINSEQRLTQALEMLRAAR-RIILTGIGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFSPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|13542206|ref|NP_111894.1| inosine 5'-monophosphate dehydrogenase [Thermoplasma volcanium
           GSS1]
 gi|14325640|dbj|BAB60543.1| IMP dehydrogenase [Thermoplasma volcanium GSS1]
          Length = 485

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 8/179 (4%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
            + +        +   P  S+ M     +A+AIA+     F     +   P  K   +  
Sbjct: 31  NVDVSSRLSRRINVKVPIVSSPMDTVTEEAMAIAMARYGAFGI--IHRNQPREKEVEMVR 88

Query: 219 CASDV-MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V    P+  A TI+  K    + V+ + +KL GI+T+ D+     
Sbjct: 89  RVKREETIIIRDVYTVSPETPIEVARTIMKTKNIAGLPVL-KEEKLVGILTKRDL----E 143

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +V DVM+KN     E+  L  A+ +L ++ I  L +VD     +G++   D++
Sbjct: 144 FAKQGSTVSDVMVKNVITAPENVDLEDAINILHKNRIEKLPLVDKDNHLVGLITAKDII 202


>gi|218778785|ref|YP_002430103.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
 gi|218760169|gb|ACL02635.1| inosine-5'-monophosphate dehydrogenase [Desulfatibacillum
           alkenivorans AK-01]
          Length = 489

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M         I L             +H    +    +    V  S   + +
Sbjct: 42  NIPIVSAAMDTVTEAQTCITLAREGGIG-----FIHRNMSIDDQVLEVDKVKKSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + + + ++S+ R   V V  +G +L GI+T  D+   F  DL+   V  V
Sbjct: 97  DPVTIRPDQKVSEVLDLMSQYRISGVPVT-QGDQLVGIVTNRDLR--FEIDLDK-KVSSV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N   + E   L  +  +L +H I  L+VVD   K +G++   D+ +  
Sbjct: 153 MTKSNLVTVREGITLEESKAMLHKHRIEKLLVVDSSGKLVGLITIKDIEKIK 204


>gi|320527726|ref|ZP_08028896.1| CBS domain pair protein [Solobacterium moorei F0204]
 gi|320131891|gb|EFW24451.1| CBS domain pair protein [Solobacterium moorei F0204]
          Length = 225

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
           H   +   +    PL  A+ I+ +  F  + VVD   KL G+ITEG +     K+     
Sbjct: 6   HMTANPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLITEGLVNDASGKNATSLS 65

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+    +D+MI++   I     L  A Q++ ++ ++VL VVD+    +GI+  
Sbjct: 66  IYELNYLLSRTQAKDIMIRDVHTISPMVFLEEAAQVMLENAVNVLPVVDEENHVVGIITE 125

Query: 333 LDL 335
            D+
Sbjct: 126 KDI 128



 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 28/47 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+D M  NP  I  DT L+ A++++ +++   L VVD   K IG++ 
Sbjct: 3   VKDHMTANPITITADTPLSKALEIMGKNHFHRLPVVDANHKLIGLIT 49


>gi|227832309|ref|YP_002834016.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262183834|ref|ZP_06043255.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453325|gb|ACP32078.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 504

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 42/208 (20%), Positives = 76/208 (36%), Gaps = 16/208 (7%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            I L  +T ++  ++   +++V   +    +         P  SA M       +AI + 
Sbjct: 13  KIALYGLTFDDVLLLPAESNVVPSEVDTSAQFTRNIRLGVPLASAAMDTVTEARMAIGMA 72

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKR 250
                      VLH              V  S   +            + +  T+ +  R
Sbjct: 73  RQGGIG-----VLHRNLSAEEQAQQVEIVKRSESGMVTDPVTATPDMTIDEVDTLCARYR 127

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLL 309
              + VVD+   L GI T  D+   F  D +   V ++M   P V+  E      A++LL
Sbjct: 128 ISGLPVVDKQGTLVGICTNRDMR--FEADFSR-KVSEIMTPMPLVVAKEGVSKEEALELL 184

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + +  L +VDD  K +G++   D ++
Sbjct: 185 SANKVEKLPIVDDANKLVGLITVKDFVK 212


>gi|126734515|ref|ZP_01750261.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
 gi|126715070|gb|EBA11935.1| nucleotidyltransferase, putative [Roseobacter sp. CCS2]
          Length = 608

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 4/122 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH 277
                     +         + DA   + +KR  C+ VV   +KL GI+T  D+  +   
Sbjct: 142 RVQVATLMVPNPVTCAPTMTIQDAAKKMQDKRISCLCVV-AKKKLTGILTVRDLSGKALA 200

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + L     V D+M  +P+V+    + +  + ++ ++ +  L +V +  K +GIV   DL 
Sbjct: 201 QGLPPNTPVSDIMTPDPRVLSPSAIGSDVLHMMMEYRLGHLPIV-EAGKLVGIVTQTDLT 259

Query: 337 RF 338
           RF
Sbjct: 260 RF 261



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL  + V  +M+ NP        +  A + ++   IS L VV   +K  GI+   DL
Sbjct: 139 DLTRVQVATLMVPNPVTCAPTMTIQDAAKKMQDKRISCLCVV-AKKKLTGILTVRDL 194


>gi|239637213|ref|ZP_04678201.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus warneri
           L37603]
 gi|239597169|gb|EEQ79678.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus warneri
           L37603]
          Length = 488

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 37/183 (20%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVRLSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +V+  + ++L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFYLTPDESVYEAEALMGKYRISGVPIVNNLDDRELVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K +       T L  A  +L++H I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEDLITAPVGTTLDEAEAILQEHKIEKLPLV-KNGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|328675792|gb|AEB28467.1| Inosine-5'-monophosphate dehydrogenase [Francisella cf. novicida
           3523]
          Length = 486

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+  K+ GI+T  D    F KDL+   V  +
Sbjct: 96  DPITIKQQSSIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPKEKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPKEKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|239979979|ref|ZP_04702503.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
          Length = 495

 Score = 94.2 bits (233), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 67/192 (34%), Gaps = 19/192 (9%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVL 207
            A   +              P  SA M       +AIA+          RN S  D    
Sbjct: 24  MAPDQIDTTSRLSKNVKVNVPLLSAAMDKVTESRMAIAMARQGGAGVLHRNLSIED---- 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               +   + +              V     L +A  I ++ R   V V D   +L GI+
Sbjct: 80  ----QANQVDLVKRSESGMVTDPITVHPDATLGEADAICAKFRISGVPVTDGSGRLLGIV 135

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T  D+   F  D  T  V +VM   P V  +       AM+LLR+H I  L +VDD    
Sbjct: 136 TNRDM--AFESD-RTRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDEGVL 192

Query: 327 IGIVHFLDLLRF 338
            G++   D ++ 
Sbjct: 193 KGLITVKDFVKA 204


>gi|289168902|ref|YP_003447171.1| inosine monophosphate dehydrogenase [Streptococcus mitis B6]
 gi|288908469|emb|CBJ23311.1| inosine monophosphate dehydrogenase [Streptococcus mitis B6]
          Length = 492

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAENILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|260466886|ref|ZP_05813070.1| inosine-5'-monophosphate dehydrogenase [Mesorhizobium opportunistum
           WSM2075]
 gi|259029388|gb|EEW30680.1| inosine-5'-monophosphate dehydrogenase [Mesorhizobium opportunistum
           WSM2075]
          Length = 500

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++            P  +   +            +   
Sbjct: 46  NVPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNFSPAEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA++++       + VV+ G        +L GI+T  D+            V
Sbjct: 105 IGPDATLADALSLMRTYSISGIPVVENGGTGGHKTGRLVGILTNRDVRFASDP---AQKV 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E+     A +LL QH I  L+VVD     +G++   D+
Sbjct: 162 YELMTRENLITVKENVDQDEAKRLLHQHRIEKLVVVDKSGNCVGLITVKDI 212


>gi|75676579|ref|YP_319000.1| nucleotidyl transferase [Nitrobacter winogradskyi Nb-255]
 gi|74421449|gb|ABA05648.1| Nucleotidyl transferase [Nitrobacter winogradskyi Nb-255]
          Length = 346

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 2/97 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMI 290
           +V    PL++A+  + E       VV+   K+ G +T+GD+ R     +     V +VM 
Sbjct: 6   VVTEEIPLLEALRRIDEGNLQLA-VVERDGKIVGTVTDGDVRRALLNGVGLDTPVNEVMN 64

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +NP V         A+ L+R+ +I  L +VDD  K I
Sbjct: 65  RNPVVAPAGISNAAALTLMRRRSIHQLPIVDDHGKVI 101


>gi|225428867|ref|XP_002285148.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|297741249|emb|CBI32380.3| unnamed protein product [Vitis vinifera]
          Length = 230

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 58/156 (37%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D M   + + +VK   P+ +A+  L EK+     V+DE  KL G++++ D+ 
Sbjct: 65  RNGTYRVGDFMTKKEHLHVVKPTTPVDEALEALVEKKITGFPVIDEDWKLVGLVSDYDLL 124

Query: 274 -----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                                        +          V DVM   P V+ E T L  
Sbjct: 125 ALDSISGGAQIDTTLFPDVDSSWKAFNQIQKLLAKTKGKVVGDVMTPAPVVVHETTNLED 184

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A +LL +     L VVD   K +GIV    ++R  +
Sbjct: 185 AARLLLETKYRRLPVVDGDGKLVGIVTRGSVVRAAL 220



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 28/74 (37%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              +   KL               +  +V     L DA  +L E ++  + VVD   KL 
Sbjct: 148 KAFNQIQKLLAKTKGKVVGDVMTPAPVVVHETTNLEDAARLLLETKYRRLPVVDGDGKLV 207

Query: 265 GIITEGDIFRNFHK 278
           GI+T G + R   K
Sbjct: 208 GIVTRGSVVRAALK 221


>gi|291451836|ref|ZP_06591226.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
 gi|291354785|gb|EFE81687.1| inosine-5'-monophosphate dehydrogenase [Streptomyces albus J1074]
          Length = 502

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/192 (23%), Positives = 67/192 (34%), Gaps = 19/192 (9%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVL 207
            A   +              P  SA M       +AIA+          RN S  D    
Sbjct: 31  MAPDQIDTTSRLSKNVKVNVPLLSAAMDKVTESRMAIAMARQGGAGVLHRNLSIED---- 86

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               +   + +              V     L +A  I ++ R   V V D   +L GI+
Sbjct: 87  ----QANQVDLVKRSESGMVTDPITVHPDATLGEADAICAKFRISGVPVTDGSGRLLGIV 142

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T  D+   F  D  T  V +VM   P V  +       AM+LLR+H I  L +VDD    
Sbjct: 143 TNRDM--AFESD-RTRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDEGVL 199

Query: 327 IGIVHFLDLLRF 338
            G++   D ++ 
Sbjct: 200 KGLITVKDFVKA 211


>gi|209885943|ref|YP_002289800.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
 gi|209874139|gb|ACI93935.1| CBS:transport associated [Oligotropha carboxidovorans OM5]
          Length = 242

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 53/141 (37%), Gaps = 25/141 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                   +   V     L +A  ++ +     + VVD+  KL G+I+EGD  R      
Sbjct: 2   RAHQIMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVRRVEIGT 61

Query: 281 NTL------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            T                          V  VM   P  I EDT L   ++L+ +HNI  
Sbjct: 62  QTKRARWLAFFIGPGRAATEFVHERGRKVGVVMNPQPVTITEDTNLEDIVRLMEKHNIKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV    + +G+V   DLLR
Sbjct: 122 LPVV-KDMQLLGMVTRTDLLR 141



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 31/55 (56%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +NP  + EDT L  A  L+ Q++IS L VVD   K +G++   D +R
Sbjct: 1   MRAHQIMTRNPVSVTEDTTLREAALLMLQNHISGLPVVDKFGKLVGVISEGDFVR 55



 Score = 36.4 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 10/65 (15%), Positives = 27/65 (41%), Gaps = 4/65 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     L D + ++ +     + VV +  +L G++T  D+ R   +  +++  
Sbjct: 94  MNPQPVTITEDTNLEDIVRLMEKHNIKRLPVV-KDMQLLGMVTRTDLLRTVASLDREVPD 152

Query: 283 LSVED 287
            + +D
Sbjct: 153 PTADD 157


>gi|296395316|ref|YP_003660200.1| inosine-5'-monophosphate dehydrogenase [Segniliparus rotundus DSM
           44985]
 gi|296182463|gb|ADG99369.1| inosine-5'-monophosphate dehydrogenase [Segniliparus rotundus DSM
           44985]
          Length = 512

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 65/204 (31%), Gaps = 16/204 (7%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM--------QLAIGDALAIALLESRN 198
              +++    D VL LP E +  P     ++              +  D +  A +    
Sbjct: 21  NKIAMLGLTFDDVLLLPSESDVMPAEADTSSQLTAKIRLKVPLVSSAMDTVTEARMAIAM 80

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCV 254
                  VLH              V  S                L +   + +  R   +
Sbjct: 81  ARAGGLGVLHRNLSAAEQAQAVETVKRSEAGMVTDPVTCSPDMTLAEVDALCARYRISGL 140

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHN 313
            VV    +L GIIT  D+     +D    +V +VM K P     +      A+ +LR+H 
Sbjct: 141 PVVASDGQLVGIITNRDMRFEVDQD---RTVSEVMTKQPLVTAPQGVTAAAALGILRRHK 197

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L VV       G++   D  +
Sbjct: 198 IEKLPVVSGNGALTGLITVKDFAK 221


>gi|160875862|ref|YP_001555178.1| CBS domain-containing protein [Shewanella baltica OS195]
 gi|160861384|gb|ABX49918.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS195]
 gi|315268053|gb|ADT94906.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Shewanella baltica OS678]
          Length = 615

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +  ++     +  A  ++   R   + V D   KL GI+T+ D+  R     L+  +
Sbjct: 156 MSSAPIVIDAHASVTQAALLMRNSRVSSLLVTD-NHKLVGILTDKDLRNRVLAVGLDGHI 214

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V   M  +P  I  + L+  AM L+ +HNI  L ++D   KAIG+V   D+LR
Sbjct: 215 AVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 2/63 (3%)

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KDL T S +  +M   P VI     +T A  L+R   +S L+V D+  K +GI+  
Sbjct: 140 RFKAKDLTTTSRISTLMSSAPIVIDAHASVTQAALLMRNSRVSSLLVTDN-HKLVGILTD 198

Query: 333 LDL 335
            DL
Sbjct: 199 KDL 201



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +       S   +     + +A+ ++SE     + ++D+  K  G++T  DI R
Sbjct: 213 HIAVHQAMTVSPISISSNALIFEAMLLMSEHNIHHLPIIDQD-KAIGMVTSTDILR 267


>gi|70727582|ref|YP_254498.1| inositol-monophosphate dehydrogenase [Staphylococcus haemolyticus
           JCSC1435]
 gi|123659109|sp|Q4L385|IMDH_STAHJ RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|68448308|dbj|BAE05892.1| inositol-monophosphate dehydrogenase [Staphylococcus haemolyticus
           JCSC1435]
          Length = 488

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 16/182 (8%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L  E         P  SA M       +AIA+            V+H    +       
Sbjct: 31  DLSVELSERIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGIEEQAEEV 85

Query: 221 SDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFR 274
             V  S + +            + +A  ++ + R   V +V + +  +L GI+T  D+  
Sbjct: 86  QKVKRSENGVITNPFYLTPDESVYEAEALMGKYRISGVPIVSDKESRELVGILTNRDLR- 144

Query: 275 NFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            F +D  ++ + DVM K N       T L  A  +L++H I  L +V +  +  G++   
Sbjct: 145 -FIEDF-SIKISDVMTKENLITAPVGTTLDEAETILQEHKIEKLPLV-ENGRLEGLITIK 201

Query: 334 DL 335
           D+
Sbjct: 202 DI 203


>gi|262277408|ref|ZP_06055201.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HIMB114]
 gi|262224511|gb|EEY74970.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HIMB114]
          Length = 486

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 74/194 (38%), Gaps = 25/194 (12%)

Query: 159 VLTLPKEPESCPHGL-------------APTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P++    P G               P  SA M       LAIA+ +    S     
Sbjct: 12  VLLIPQKSSVQPSGCSTTTNLSKNIKLEVPILSAAMDTVSESKLAIAMAQLGGAS----- 66

Query: 206 VLHPGGKLGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            LH    +         V         +   +     + +   I+ EK    + VV+   
Sbjct: 67  CLHKNMSIDQQVEEVLKVKKYESGMVINPITIGPDNLISEVRLIIKEKHISGIPVVNSQN 126

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           K+ GIIT  D+   F ++ +   V+D+M KN   I +      A +LL +H I  L+V +
Sbjct: 127 KILGIITNRDLR--FSRN-DKAKVKDLMTKNVITIRQGYSSNEAKKLLHKHRIEKLIVTN 183

Query: 322 DCQKAIGIVHFLDL 335
              + +G++   D+
Sbjct: 184 SQNQCLGLITVKDI 197


>gi|213964753|ref|ZP_03392953.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
 gi|213952946|gb|EEB64328.1| cyclic nucleotide-binding protein [Corynebacterium amycolatum SK46]
          Length = 624

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 9/139 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-- 262
             L       +L    +D+M +            + +A  I++E+    + V++      
Sbjct: 138 SKLRSTAASESLRTRVADLMETSLVTC--SADATVQEAAQIMTERNVSSLLVMESAGANQ 195

Query: 263 --LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L GIIT+ D+ R            V +VM  NP+ I  D L+  AM L+ +     L 
Sbjct: 196 SPLVGIITDRDLRRRVLAEAKPAESLVSEVMTGNPETISPDLLVFEAMLLMAERGYHHLP 255

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V D   + +G++   DLLR
Sbjct: 256 VHDGT-RVVGMIVIGDLLR 273



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 9/89 (10%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + ++  R+          P   L +  +          +   +     + +A+ +++E+ 
Sbjct: 199 VGIITDRDLRRRVLAEAKPAESLVSEVMT--------GNPETISPDLLVFEAMLLMAERG 250

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +  + V D G ++ G+I  GD+ R+ H D
Sbjct: 251 YHHLPVHD-GTRVVGMIVIGDLLRSLHTD 278


>gi|72162995|ref|YP_290652.1| inosine-5'-monophosphate dehydrogenase [Thermobifida fusca YX]
 gi|71916727|gb|AAZ56629.1| inosine-5'-monophosphate dehydrogenase [Thermobifida fusca YX]
          Length = 500

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 61/173 (35%), Gaps = 19/173 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +A+A+          RN S  D        +   + +       
Sbjct: 52  SIPLVSAAMDTVTEARMAVAIARQGGAGVLHRNLSIED--------QAAQVDLVKRSEAG 103

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                        L D   + +  R     VVD+  +L GI+T  D+   F +D  +  V
Sbjct: 104 MITHPVTCHPDDTLADVERLSAHYRISGAPVVDDDGRLVGIVTNRDMR--FEED-RSRPV 160

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM   P V          A +LLR + +  L +VDD  +  G++   D  +
Sbjct: 161 REVMTPMPLVTAPVGVSREEAFRLLRANKVEKLPLVDDEGRLRGLITVKDFTK 213


>gi|116749507|ref|YP_846194.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698571|gb|ABK17759.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 202

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 53/114 (46%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLS 284
               +  +     + +A+ ++ +     + VVD+  KL G +T+ D+        L  L+
Sbjct: 7   MTTKVITINKEASIQEALAVMKQGSIRHLPVVDQDGKLLGWVTDADLRGVLIASMLEELT 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +EDVMI+ P  +  D  L  A  L+    I  L VV + +K  G++  +D+L  
Sbjct: 67  LEDVMIRRPFTVTPDMSLEEASHLILDKRIGGLPVV-EGEKLTGVITTVDILSA 119



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V   M      I ++  +  A+ +++Q +I  L VVD   K +G V   DL
Sbjct: 3   VRHWMTTKVITINKEASIQEALAVMKQGSIRHLPVVDQDGKLLGWVTDADL 53



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 28/83 (33%), Positives = 40/83 (48%), Gaps = 9/83 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           V     L +A  ++ +KR G + VV EG+KL G+IT  DI      F    +  S  DV 
Sbjct: 78  VTPDMSLEEASHLILDKRIGGLPVV-EGEKLTGVITTVDILSAFITFMGMFSHSSRLDV- 135

Query: 290 IKNPKVILEDTLLTVAMQLLRQH 312
               K+    T L   ++L+RQH
Sbjct: 136 ----KITTPRTSLHEIIRLVRQH 154


>gi|333026590|ref|ZP_08454654.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces sp.
           Tu6071]
 gi|332746442|gb|EGJ76883.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces sp.
           Tu6071]
          Length = 500

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           V+  A   +              P  SA M       +AIA+            VLH   
Sbjct: 27  VSDMAPDEIDTSSRLSKNVRLNIPLVSAAMDKVTETRMAIAMARQGGVG-----VLHRNL 81

Query: 212 KLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            +         V  S          V     L +A  I ++ R   V VVD   KL GI+
Sbjct: 82  SIEDQANQVDLVKRSESGMVTDPITVNPDATLQEADAICAKFRISGVPVVDGAGKLLGIV 141

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T  D+   F  D  +  V +VM   P V  +       AM LLR+H I  L +VDD    
Sbjct: 142 TNRDM--AFETD-RSRKVREVMTPMPLVTGKVGISGVDAMGLLRRHKIEKLPLVDDAGVL 198

Query: 327 IGIVHFLDLLRF 338
            G++   D ++ 
Sbjct: 199 KGLITVKDFVKA 210


>gi|209885591|ref|YP_002289448.1| inosine-5'-monophosphate dehydrogenase [Oligotropha carboxidovorans
           OM5]
 gi|209873787|gb|ACI93583.1| inosine-5'-monophosphate dehydrogenase [Oligotropha carboxidovorans
           OM5]
          Length = 496

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ +S            P G+   +            +   
Sbjct: 44  NIPIIASAMDTVTEARMAIAMAQSGGLGVIH-RNFDPEGQAAQVRQVKKFESGMVVNPLT 102

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++ +  F  + VV  G      KL GI+T  D+      +     V +
Sbjct: 103 IDPNARLADALAMMKDHGFSGIPVVTGGSNGQPGKLVGILTNRDVRFATDPN---QKVSE 159

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M       + E    T A +LL Q+ I  L+VVDD  + +G++   D+ + 
Sbjct: 160 LMTHEKLITVREGVSQTEAKRLLHQNRIEKLLVVDDQYRCVGLITVKDMEKA 211


>gi|169630800|ref|YP_001704449.1| inosine 5'-monophosphate dehydrogenase [Mycobacterium abscessus
           ATCC 19977]
 gi|169242767|emb|CAM63795.1| Probable inosine-5'-monophosphate dehydrogenase GuaB2
           [Mycobacterium abscessus]
          Length = 507

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 12/143 (8%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            RN S  D       G++ T+    + ++    +         L +   + +  R   + 
Sbjct: 85  HRNLSVED-----QAGQVETVKRSEAGMV---TNPVTCSPANTLAEVDALCARFRISGLP 136

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNI 314
           VVD    L GIIT  D+   F  DL+   V +VM K P     E      A+ LLR++ I
Sbjct: 137 VVDAQGALVGIITNRDMR--FEADLSK-PVAEVMTKAPLITAREGVTADAALGLLRRNKI 193

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VD   +  G++   D  +
Sbjct: 194 EKLPIVDGEGRLTGLITVKDFAK 216


>gi|187934717|ref|YP_001885507.1| RpiR family transcriptional regulator [Clostridium botulinum B str.
           Eklund 17B]
 gi|187722870|gb|ACD24091.1| transcriptional regulator, RpiR family [Clostridium botulinum B
           str. Eklund 17B]
          Length = 285

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++S+ES+L+   +     A+  I   K +++  G+G S  I +        TG       
Sbjct: 109 INSIESTLKINKTEDLDKAIAIILNAK-KIMFFGMGGSWTIANDAYHKFIRTGIDCVASC 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        M    D II  S SGS+ EL   +  A++  I +IAIT   KS +A  +D
Sbjct: 168 DSHWQVMFSSMANSGDAIIAFSNSGSNKELVENINLAKKRGIKIIAITGNEKSPLAKISD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           + L               +    + +   D L + +   R
Sbjct: 228 LHLIAYGNESMFRSEAMESRLTSLMIV--DWLYVGVAIKR 265


>gi|325964068|ref|YP_004241974.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter
           phenanthrenivorans Sphe3]
 gi|323470155|gb|ADX73840.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter
           phenanthrenivorans Sphe3]
          Length = 503

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 70/205 (34%), Gaps = 13/205 (6%)

Query: 142 IAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +T ++  ++  H +++                  P  SA M       +AIA+     
Sbjct: 12  IGLTYDDVLLLPGHTEVIPSEADTSSRISKRITVQTPLLSAAMDTVTESRMAIAMARQGG 71

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCV 254
                  V+H    +         V  S   +      ++    L +   + ++ R   +
Sbjct: 72  LG-----VVHRNLSIADQADQVDRVKRSESGMITNPLTIRPEATLRELDNLCAQYRVSGL 126

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
            VVDE  +L GI+T  D       D     V DVM K P V          A   L  + 
Sbjct: 127 PVVDEDNRLLGIVTNRDTRFVPESDFPLRLVSDVMTKMPLVTGHVGISREEASHKLATNK 186

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I  L +VD+  +  G++   D  + 
Sbjct: 187 IEKLPLVDEQGRLKGLITTKDFTKA 211


>gi|257053845|ref|YP_003131678.1| inosine-5'-monophosphate dehydrogenase [Halorhabdus utahensis DSM
           12940]
 gi|256692608|gb|ACV12945.1| inosine-5'-monophosphate dehydrogenase [Halorhabdus utahensis DSM
           12940]
          Length = 495

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +  +      V  + + I  
Sbjct: 50  NVPVLSAAMDTVTESDMAIAMARHGGLG-----VIHRNMDVDRMVTEIERVKRADELIIR 104

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + D   ++  +      VV +  ++ GII+  DI        +   V + 
Sbjct: 105 DVVTADPDQTVRDVDAMMQRQGVSGAPVVGDDDEVLGIISATDIRPYLEVGDSDA-VREA 163

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M         D     A++L+ +H I  + +VD+  + IG+V    +L+
Sbjct: 164 MTDEVITTEADVSPREALELMYEHKIERVPIVDEENRLIGLVTMQGILQ 212


>gi|117919684|ref|YP_868876.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. ANA-3]
 gi|117612016|gb|ABK47470.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. ANA-3]
          Length = 488

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTAKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  + I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKA 204


>gi|331267333|ref|YP_004326963.1| inosine monophosphate dehydrogenase [Streptococcus oralis Uo5]
 gi|326684005|emb|CBZ01623.1| inosine monophosphate dehydrogenase [Streptococcus oralis Uo5]
          Length = 492

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAEHILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|296454706|ref|YP_003661849.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JDM301]
 gi|296184137|gb|ADH01019.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JDM301]
          Length = 517

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 113 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASEDYDTLKVKDV 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 222


>gi|294506516|ref|YP_003570574.1| mannose-1-phosphate guanyltransferase [Salinibacter ruber M8]
 gi|294342844|emb|CBH23622.1| putative mannose-1-phosphate guanyltransferase [Salinibacter ruber
           M8]
          Length = 349

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     + +A+ ++ E       V +E  +L+G+ T+GDI R   KDL+    V  VM +
Sbjct: 9   VSPDQTIREALEVIDEGGVQIAIVANEEDRLRGVATDGDIRRGILKDLDLDAPVASVMNE 68

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P            +  +R   I  + +VD+  + +GI    DLL
Sbjct: 69  DPITARPKEDRQSLIDTMRARRIHQIPLVDNEGRVVGIEVLDDLL 113


>gi|294635155|ref|ZP_06713664.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
 gi|291091460|gb|EFE24021.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
          Length = 283

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 84/185 (45%), Gaps = 5/185 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T   H +++  +++     ++AEK  +++L++++      Q   A++ +   + R++I G
Sbjct: 84  TPIHHGILRQDSLKLVGEKLMAEK--IAALQATMTINHEEQLQQALKMLLNAR-RIIIAG 140

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G SG +   LA+ L   G  ++    A         +   D+++ +S+SG   E+    
Sbjct: 141 LGSSGLVAKDLANKLMQIGMAAYAESDAHVQIACAHAMQPQDVLMAISYSGERKEVNTAA 200

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             ARR    ++A+T    + +   AD+ L      +         +S + Q A+ D L +
Sbjct: 201 AMARRCGAQVLALTGFPPNSLQELADLTLYT--VTDDHAIQAMAISSRVAQGALTDLLYM 258

Query: 192 ALLES 196
            L++ 
Sbjct: 259 GLVQQ 263


>gi|29831543|ref|NP_826177.1| inosine-5'-monophosphate dehydrogenase [Streptomyces avermitilis
           MA-4680]
 gi|29608659|dbj|BAC72712.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           avermitilis MA-4680]
          Length = 502

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 48/189 (25%), Positives = 65/189 (34%), Gaps = 13/189 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A   +              P  SA M       +AIA+            VLH    + 
Sbjct: 31  MAPDQIDTASHVSKNVRVNIPLLSAAMDKVTEARMAIAMARQGGVG-----VLHRNLSIE 85

Query: 215 TLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S          V     L +A  I ++ R   V V D   KL GI+T  
Sbjct: 86  DQANQVDLVKRSESGMVTDPITVHPDATLAEADAICAKFRISGVPVTDGNGKLLGIVTNR 145

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D  +  V +VM   P V  +       AMQLLR+H I  L +VDD     G+
Sbjct: 146 DM--AFETD-RSRQVREVMTPMPLVTGKVGISGNDAMQLLRRHKIEKLPLVDDAGILKGL 202

Query: 330 VHFLDLLRF 338
           +   D  + 
Sbjct: 203 ITVKDFTKA 211


>gi|283807213|pdb|3KPC|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine
          Length = 124

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N 
Sbjct: 17  HSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNV 74

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ED  +      + ++NIS + VVDD ++ +GIV   D+ R 
Sbjct: 75  ITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL 119



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K P     +  +  A ++L +HNI+ L +VD+  K +GI+   D+ + 
Sbjct: 5   VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 58



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P+      +S+     V VVD+ +++ GI+T 
Sbjct: 56  AKALAQNKKTIEEIMTRNVITA--HEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTS 113

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 114 EDISRLFG 121


>gi|281202067|gb|EFA76272.1| hypothetical protein PPL_10033 [Polysphondylium pallidum PN500]
          Length = 240

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 68/151 (45%), Gaps = 5/151 (3%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEK 249
           I +L  +  +       H  G + T  +        G    + VK G  + +AI  + + 
Sbjct: 62  IEVLNFKELTPEAKERRHTAGFVDTKVMELLSNKPRGYQNIIKVKEGDTVFNAIQTMQKH 121

Query: 250 RFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAM 306
           + G + VVD   ++ GI +E D   R   KDL++ +  ++DVM  +   +  DT     M
Sbjct: 122 KVGALVVVDAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVMSPHVVTVRTDTSTAKCM 181

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++ +     L VV + +K +GI+   DL++
Sbjct: 182 SIMIKRGFRHLPVV-EGEKLVGILSIGDLVK 211



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 11/172 (6%)

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL-PKEPESCPHGL 173
           +I +S +      K +   A+        + ++   +++        +   +        
Sbjct: 55  MINISRNIEVLNFKELTPEAKERRHTAGFVDTKVMELLSNKPRGYQNIIKVKEGDTVFNA 114

Query: 174 APTTSAIMQLAIGDALAIALLESRN---FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
                  MQ     AL +   E+R    FSE D+        L +      DVM     +
Sbjct: 115 I----QTMQKHKVGALVVVDAENRMTGIFSERDYMNRIVVKDLSSRTTYIKDVM--SPHV 168

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
             V+        ++I+ ++ F  + VV EG+KL GI++ GD+ ++   D  +
Sbjct: 169 VTVRTDTSTAKCMSIMIKRGFRHLPVV-EGEKLVGILSIGDLVKHIISDQRS 219


>gi|113969578|ref|YP_733371.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. MR-4]
 gi|113884262|gb|ABI38314.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. MR-4]
          Length = 488

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTAKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  + I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKA 204


>gi|114046811|ref|YP_737361.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. MR-7]
 gi|113888253|gb|ABI42304.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. MR-7]
          Length = 488

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   + ++  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTAKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  + I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKARLVTVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKA 204


>gi|320108351|ref|YP_004183941.1| inosine-5'-monophosphate dehydrogenase [Terriglobus saanensis
           SP1PR4]
 gi|319926872|gb|ADV83947.1| inosine-5'-monophosphate dehydrogenase [Terriglobus saanensis
           SP1PR4]
          Length = 507

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         V+H    +         V  S   + +
Sbjct: 42  NTPLLSAAMDTVTESRLAIAMAQAGG-----MGVIHRNLSIEQQAQEVDKVKRSESGMIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++   P+ DA+ ++   +   V V  +G+KL GI+T  D+      D+    + +V
Sbjct: 97  DPVTIEPERPIADALEVMRRYKISGVPVT-QGKKLVGILTNRDLRFISQTDI---PISEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   +   T L  A  +L QH +  L+VV+D  +  G++   D+ + 
Sbjct: 153 MTKKNLITVPVGTTLEQAEHILHQHRVEKLLVVNDAYELKGLITVKDIQKK 203


>gi|296875530|ref|ZP_06899602.1| IMP dehydrogenase [Streptococcus parasanguinis ATCC 15912]
 gi|322390515|ref|ZP_08064033.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parasanguinis
           ATCC 903]
 gi|296433454|gb|EFH19229.1| IMP dehydrogenase [Streptococcus parasanguinis ATCC 15912]
 gi|321142789|gb|EFX38249.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parasanguinis
           ATCC 903]
          Length = 493

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAMARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFYLTPSHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLETAERILQEHRIEKLPLVDENGRLSGLITIKDI 206


>gi|23466267|ref|NP_696870.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           NCC2705]
 gi|23327016|gb|AAN25506.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           NCC2705]
          Length = 545

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 86  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 140

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 141 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDV 200

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 201 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 250


>gi|257091949|ref|YP_003165590.1| CBS domain containing membrane protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257044473|gb|ACV33661.1| CBS domain containing membrane protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 143

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKD 279
           +      + +V     +  A+ ++++   G V V+D G++L GI +E D  R    F K 
Sbjct: 8   LADKSGPLVIVSPDDAVFHALQVMADHNVGAVLVLD-GKQLVGIFSERDYARKVILFGKA 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V ++M      +  D  +   M ++ + +   L V+DD  + +GIV   D+++ 
Sbjct: 67  SKDTRVREIMTDKVLYVTPDRTVDECMAIMTEKHFRHLPVLDDDGRVVGIVSIGDVVKE 125



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G             D +  V     + + + I++EK F  + V+D
Sbjct: 51  FSERDYA--RKVILFGKASKDTRVREIMTDKVLYVTPDRTVDECMAIMTEKHFRHLPVLD 108

Query: 259 EGQKLKGIITEGDIFR 274
           +  ++ GI++ GD+ +
Sbjct: 109 DDGRVVGIVSIGDVVK 124


>gi|261402995|ref|YP_003247219.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369988|gb|ACX72737.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 296

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +   C L +   + +EK      VVD   KL G+I+  DI  N         V++VM KN
Sbjct: 183 ISPNCTLKETAKLFAEKYISGAPVVDR-GKLVGVISLHDIAENIEN--VDKKVKEVMRKN 239

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I ++  +  A++++ ++N+  L++VDD +K +GI+   D+L+ 
Sbjct: 240 VLTIHKNEKIHDALKIMNKNNVGRLVIVDDDEKIVGIITRTDILKI 285



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 33/82 (40%), Gaps = 10/82 (12%)

Query: 260 GQKLKGIITEGDIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             ++ G   + DI R    D      +  + V DV IK    I  +  L    +L  +  
Sbjct: 144 NGRIVG--RD-DIHRILLIDVLGVSSIPNIRVGDVGIKEVWTISPNCTLKETAKLFAEKY 200

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           IS   VVD   K +G++   D+
Sbjct: 201 ISGAPVVD-RGKLVGVISLHDI 221



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 25/44 (56%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     + DA+ I+++   G + +VD+ +K+ GIIT  DI +  
Sbjct: 243 IHKNEKIHDALKIMNKNNVGRLVIVDDDEKIVGIITRTDILKII 286


>gi|152998333|ref|YP_001343168.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150839257|gb|ABR73233.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Marinomonas sp. MWYL1]
          Length = 618

 Score = 94.2 bits (233), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 23/136 (16%), Positives = 57/136 (41%), Gaps = 6/136 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +      +  +      ++          I   + +A  I++E R   + + D+ + L 
Sbjct: 138 AMESQNSDVSLMTCPVVSLLRRPPIST--DISSSIRNAAQIMAEHRVSSLLITDKDE-LI 194

Query: 265 GIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T+ D+  R   + L     + ++M ++P V+      + A+  +   N+  + +V  
Sbjct: 195 GIVTDRDLRTRAVAEGLAYDTPISEIMTRDPIVMDSGDYASEAVLKMMDRNVHHIPIV-K 253

Query: 323 CQKAIGIVHFLDLLRF 338
             + IG+V   D+++ 
Sbjct: 254 NGRPIGVVSTGDIIQK 269


>gi|310287867|ref|YP_003939125.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           S17]
 gi|309251803|gb|ADO53551.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium bifidum
           S17]
          Length = 506

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 52/206 (25%), Positives = 76/206 (36%), Gaps = 23/206 (11%)

Query: 150 SVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLES 196
           S +    D VL LP E +  P                 P  SA M       +AIA+  +
Sbjct: 12  SKLGLAYDDVLLLPNETDVIPSEVDTTTHLTREITMKVPAISAAMDTVTESEMAIAMARN 71

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFG 252
                    VLH    +         V  S   +      V     L D   +  +    
Sbjct: 72  GGIG-----VLHRNLSIDDQAAQVDVVKRSESGMITDPLTVNPDVTLADLDKLCGKFHIS 126

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQ 311
            + VVDE  +L GIIT  D+     +D + L V+DVM K N      +     A +LL Q
Sbjct: 127 GLPVVDEENRLVGIITNRDMRFIPSEDYDHLKVKDVMTKENLITGPANISKDDAHRLLAQ 186

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           H +  L ++DD  K  G++   D ++
Sbjct: 187 HKVEKLPLIDDNGKLAGLITVKDFVK 212


>gi|309792464|ref|ZP_07686928.1| CBS domain containing membrane protein [Oscillochloris trichoides
           DG6]
 gi|308225452|gb|EFO79216.1| CBS domain containing membrane protein [Oscillochloris trichoides
           DG6]
          Length = 137

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 12/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  + +  PL DA+ ++ E     + VV +  +L+G+IT+GDI             
Sbjct: 1   MRTPAVTINLAAPLSDALAMMREHDVRRLPVVIDTGELRGMITQGDIRGADIMRVAGLDP 60

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               + L  + V +VM  NP  I  +T L  A  L+ ++ I  L VVDD  + IGI+   
Sbjct: 61  LDIAQALRQVKVYEVMTTNPMAITPETGLREAALLMIENKIGGLPVVDDQNRVIGIITES 120

Query: 334 DL 335
           DL
Sbjct: 121 DL 122



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 26/65 (40%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +               +   +     L +A  ++ E + G + VVD+  ++ GIITE D
Sbjct: 62  DIAQALRQVKVYEVMTTNPMAITPETGLREAALLMIENKIGGLPVVDDQNRVIGIITESD 121

Query: 272 IFRNF 276
           +F   
Sbjct: 122 LFETL 126



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M      I     L+ A+ ++R+H++  L VV D  +  G++   D+    I+
Sbjct: 1   MRTPAVTINLAAPLSDALAMMREHDVRRLPVVIDTGELRGMITQGDIRGADIM 53


>gi|238019127|ref|ZP_04599553.1| hypothetical protein VEIDISOL_00989 [Veillonella dispar ATCC 17748]
 gi|237863826|gb|EEP65116.1| hypothetical protein VEIDISOL_00989 [Veillonella dispar ATCC 17748]
          Length = 484

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGGLG-----VIHKNMSIEEQAHEVDKVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  I+ + +   V +  E  KL GIIT  D+   F  DL T  + D 
Sbjct: 98  DPIFLSPQNLLSDAAEIMGKYKISGVPIT-EHGKLVGIITNRDMR--FETDL-TRQIGDC 153

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+      E T L  A  +L +H I  L +VD      G++   D+ + 
Sbjct: 154 MTKDSLVTAPEGTSLEEAKAILSEHRIEKLPLVDGDGNLKGLITIKDIEKA 204


>gi|134103138|ref|YP_001108799.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|291003919|ref|ZP_06561892.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
 gi|133915761|emb|CAM05874.1| inosine-5'-monophosphate dehydrogenase [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 503

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 44/203 (21%), Positives = 72/203 (35%), Gaps = 22/203 (10%)

Query: 151 VVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESR 197
            +    D VL LP E +  P G               P  SA M       +AIA+    
Sbjct: 16  SLGLTFDDVLLLPDESDVIPSGVDTGTQLSRNIRLRVPLLSAAMDTVTEARMAIAMARQG 75

Query: 198 NFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
                + +  V     ++  +    + ++              L D   + +  R   V 
Sbjct: 76  GVGILQRNLSVEEQAAQVEVVKRSEAGMV---TDPVTCSPEDTLSDVDALCARFRISGVP 132

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNI 314
           V D    L GIIT  D+        +T  V ++M   P V  +       A+ LLR+H +
Sbjct: 133 VTDPDGTLVGIITNRDMRFEVD---HTRKVREIMTSAPLVTAQVGVTAEAALGLLRRHKV 189

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L +VD+  K  G++   D ++
Sbjct: 190 EKLPIVDNAGKLRGLITVKDFVK 212


>gi|118443278|ref|YP_878931.1| inosine 5'-monophosphate dehydrogenase [Clostridium novyi NT]
 gi|118133734|gb|ABK60778.1| inosine-5'-monophosphate dehydrogenase [Clostridium novyi NT]
          Length = 484

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 41  NIPVLSAGMDTVTESKMAIAVAREGGIG-----IIHKNMSIEKQAMEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++++ R   V +  E  KL GIIT  DI   F  +     ++++
Sbjct: 96  DPFHLSPENTVQDALDLMAKYRISGVPIT-ESGKLVGIITNRDI--AFETN-YAQPIKNI 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E+T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 152 MTSENLITAPENTTVEEAKEILKGHKIEKLPLVDKENNLKGLITIKDI 199


>gi|241950133|ref|XP_002417789.1| conserved hypothetical protein [Candida dubliniensis CD36]
 gi|223641127|emb|CAX45503.1| conserved hypothetical protein [Candida dubliniensis CD36]
          Length = 605

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                 + K    + +   +++ +R  CV VV+E  +L GI T  D+  R     LN   
Sbjct: 53  KPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQ 112

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++ +M KNP           A+ L+ +     L V+D+  + +G++  
Sbjct: 113 VTIDTIMTKNPICANATDPAGDALNLMVEKGFRHLPVLDEKSQIVGVLDI 162



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K         D + +      V +   + +A  ++ E R   V V D  +++ GI T  D
Sbjct: 211 KNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKD 270

Query: 272 -IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            + R     L+    SV  VM   P V      +  A++ +   +   L VV +    IG
Sbjct: 271 VVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKMFDGHYLNLPVVANEGDIIG 330

Query: 329 IV 330
           +V
Sbjct: 331 VV 332



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 60/184 (32%), Gaps = 51/184 (27%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L    V    +M             P  DA+ ++ EK F  + V+D
Sbjct: 94  FTAKDVAFRIVGSGLNATQVTIDTIMTKNPICA--NATDPAGDALNLMVEKGFRHLPVLD 151

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL----------------------------------- 283
           E  ++ G++   DI +++ + +  L                                   
Sbjct: 152 EKSQIVGVL---DITKSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVNEQPHHVYQYFE 208

Query: 284 ---------SVEDV--MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    ++ED       P  +     +  A  L++++  + ++V D  ++  GI   
Sbjct: 209 TLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTS 268

Query: 333 LDLL 336
            D++
Sbjct: 269 KDVV 272


>gi|68536813|ref|YP_251518.1| inositol-5-monophosphate dehydrogenase [Corynebacterium jeikeium
           K411]
 gi|68264412|emb|CAI37900.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium jeikeium
           K411]
          Length = 516

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 75/209 (35%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   ++++   +    +         P  SA M       +A+A+
Sbjct: 21  NKVALVGLTFDDVLLLPAASEVIPSGVDTSTQFTRNISLNIPVASAAMDTVTEARMAVAM 80

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEK 249
                       VLH    +         V  S   +            + +   + +  
Sbjct: 81  ARHGGIG-----VLHRNLSIEDQAQQVEIVKRSEAGMITDPVTASPDMTIQEVDDLCARY 135

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VVD+   L GI+T  D+   F  D +   V + M   P V+  E      A+ L
Sbjct: 136 RISGLPVVDDEGVLVGILTNRDMR--FESDFSR-KVSEAMTPMPLVVAQEGVSAEAALSL 192

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++ +  L +VD   K  G++   D  +
Sbjct: 193 LSENKVEKLPIVDGAGKLTGLITVKDFAK 221


>gi|257866236|ref|ZP_05645889.1| IMP dehydrogenase [Enterococcus casseliflavus EC30]
 gi|257873250|ref|ZP_05652903.1| IMP dehydrogenase [Enterococcus casseliflavus EC10]
 gi|257875871|ref|ZP_05655524.1| IMP dehydrogenase [Enterococcus casseliflavus EC20]
 gi|325567664|ref|ZP_08144331.1| inosine-5'-monophosphate dehydrogenase [Enterococcus casseliflavus
           ATCC 12755]
 gi|257800194|gb|EEV29222.1| IMP dehydrogenase [Enterococcus casseliflavus EC30]
 gi|257807414|gb|EEV36236.1| IMP dehydrogenase [Enterococcus casseliflavus EC10]
 gi|257810037|gb|EEV38857.1| IMP dehydrogenase [Enterococcus casseliflavus EC20]
 gi|325159097|gb|EGC71243.1| inosine-5'-monophosphate dehydrogenase [Enterococcus casseliflavus
           ATCC 12755]
          Length = 494

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AI++            V+H    +      
Sbjct: 32  VDMKVQLAPNITLNIPIISASMDTVTDSKMAISMARQGGLG-----VIHKNMSIAAQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++S+ R   V +V+  E +KL GIIT  D+ 
Sbjct: 87  VRKVKRSESGVIIDPFFLTPSHLVADAEHLMSKYRISGVPIVETMENRKLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   T+ + DVM K+        T L  A ++L+QH I  L +VD+     G++  
Sbjct: 147 FVTD---YTMPINDVMTKDQLITAPVGTSLKDAEKILQQHKIEKLPIVDEAGILSGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206



 Score = 35.6 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + + + D +    +G  L DA  IL + +   + +VDE   L G+IT  DI +   
Sbjct: 156 NDVMTKDQLITAPVGTSLKDAEKILQQHKIEKLPIVDEAGILSGLITIKDIEKVIE 211


>gi|239906907|ref|YP_002953648.1| hypothetical protein DMR_22710 [Desulfovibrio magneticus RS-1]
 gi|239796773|dbj|BAH75762.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 218

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNT 282
               +I A  I+ +K+   + VVD+  KL GII+E D+                   L+ 
Sbjct: 16  EDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDLKAASPSTATSLDMYEMTYLLSE 75

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V+ +M K+P  I     +  A  ++R      L VVD+  K +GI+   D+ R 
Sbjct: 76  LKVKAIMTKDPVRIRRTDTVERAALIMRDRKFGSLPVVDETNKVVGIITDTDIFRL 131



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  +     ED  +  A +++R   I  L VVD   K +GI+   DL
Sbjct: 3   VGDWMSTDVATATEDVSMIKAGRIMRDKKIRRLPVVDKDGKLVGIISERDL 53



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 28/51 (54%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  ++    +  A  I+ +++FG + VVDE  K+ GIIT+ DIFR F
Sbjct: 82  MTKDPVRIRRTDTVERAALIMRDRKFGSLPVVDETNKVVGIITDTDIFRLF 132


>gi|182419398|ref|ZP_02950650.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum 5521]
 gi|237666879|ref|ZP_04526864.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182376729|gb|EDT74301.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum 5521]
 gi|237658078|gb|EEP55633.1| inosine-5'-monophosphate dehydrogenase [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 484

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLMSAGMDTVTESKMAIAMAREGGIG-----IIHKNMTIEQQAKEVDKVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++++ R   V V  +  KL GIIT  DI   F  D     + DV
Sbjct: 96  DPIYLSEDHLIQDAENLMAQYRISGVPVT-KDGKLVGIITNRDI--IFETDFQK-KISDV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +N     E T +  A ++L++H I  L +VD      G++   D+ +  
Sbjct: 152 MTSENLITSHEKTTVEEAKEILKKHKIEKLPLVDAEGNLKGLITMKDIEKVK 203


>gi|306828608|ref|ZP_07461802.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis ATCC
           6249]
 gi|304429216|gb|EFM32302.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis ATCC
           6249]
          Length = 492

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAEHILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|283807209|pdb|3KPB|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807210|pdb|3KPB|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807211|pdb|3KPB|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807212|pdb|3KPB|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807214|pdb|3KPD|A Chain A, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807215|pdb|3KPD|B Chain B, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807216|pdb|3KPD|C Chain C, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine.
 gi|283807217|pdb|3KPD|D Chain D, Crystal Structure Of The Cbs Domain Pair Of Protein Mj0100
           In Complex With 5 -Methylthioadenosine And S-Adenosyl-L-
           Methionine
          Length = 122

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +++A  IL +     + +VDE  KL GIIT  DI +   +  N  ++E++M +N 
Sbjct: 15  HSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKALAQ--NKKTIEEIMTRNV 72

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ED  +      + ++NIS + VVDD ++ +GIV   D+ R 
Sbjct: 73  ITAHEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL 117



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ K P     +  +  A ++L +HNI+ L +VD+  K +GI+   D+ + 
Sbjct: 3   VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDEHGKLVGIITSWDIAKA 56



 Score = 39.5 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 2/68 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L        ++M             P+      +S+     V VVD+ +++ GI+T 
Sbjct: 54  AKALAQNKKTIEEIMTRNVITA--HEDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTS 111

Query: 270 GDIFRNFH 277
            DI R F 
Sbjct: 112 EDISRLFG 119


>gi|119717867|ref|YP_924832.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
 gi|119538528|gb|ABL83145.1| inosine-5'-monophosphate dehydrogenase [Nocardioides sp. JS614]
          Length = 500

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            VLH    +         V  +      
Sbjct: 44  KVPLVSAAMDTVTESRMAIAMARQGGLG-----VLHRNLSIEDQAYQVDLVKRTQTGIIS 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L     +  E R     VVD   +L GIIT  D+      +  T  V++V
Sbjct: 99  NPVTIGPDATLEQLDQLAGEYRISGFPVVDADNRLLGIITNRDLRFTPVAEWATTKVDEV 158

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P      D     A  LLRQH    L +VD   +  G++   D ++
Sbjct: 159 MTPMPLITAPPDISREDATLLLRQHKRERLPLVDAQGRLAGLITVKDFVK 208


>gi|257388404|ref|YP_003178177.1| inosine-5'-monophosphate dehydrogenase [Halomicrobium mukohataei
           DSM 12286]
 gi|257170711|gb|ACV48470.1| inosine-5'-monophosphate dehydrogenase [Halomicrobium mukohataei
           DSM 12286]
          Length = 494

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       + IA+            VLH    + T+      +  + + I  
Sbjct: 50  NVPVLSAAMDTVTEGDMGIAMARHGGLG-----VLHRNMDVETMVEEIERIKRADELIIR 104

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   ++  +      VV +  ++ GII+  DI          L V + 
Sbjct: 105 DVVTASPDQTVREVDEMMDRRGVSGAPVVGDDDEVLGIISATDIRPYLEVGEEDL-VSEA 163

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        ED     A++L+ +H I  + +V++  + IG+V    +L+
Sbjct: 164 MTDEVVTAPEDVTAREALELMYEHKIERVPIVENGDRLIGLVTMQGILQ 212


>gi|154251622|ref|YP_001412446.1| inosine-5'-monophosphate dehydrogenase [Parvibaculum
           lavamentivorans DS-1]
 gi|154155572|gb|ABS62789.1| inosine-5'-monophosphate dehydrogenase [Parvibaculum
           lavamentivorans DS-1]
          Length = 486

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M       LAIA+ ++         VLH              V      + + 
Sbjct: 39  IPIISAAMDTVTEARLAIAMAQAGGIG-----VLHRNMDADVQAEHVRQVKKFESGMVVN 93

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              ++    L DA  ++       + VV++  KL GI+T  D+   F  ++    V ++M
Sbjct: 94  PVTIEPDATLADAFALMEHHGITGIPVVEQSGKLAGILTNRDVR--FATNMLE-PVRNLM 150

Query: 290 IK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K N   + +      A +LL +H I  L+VVD+    +G++   D+ + 
Sbjct: 151 TKENLVTVEDGVSQDDAKRLLHKHRIEKLLVVDEAYHCVGLITVKDIEKA 200


>gi|20559816|gb|AAM27591.1|AF498403_10 ORF_10; similar to Nucleotidyl transferase [Pseudomonas aeruginosa]
          Length = 348

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+ +   + DAIT L       V +V++ ++L G +T+GD+ R   K L     V +
Sbjct: 5   EKALITLDSTIEDAITTLDRVAMRIVMIVNDQRQLLGTLTDGDVRRALLKQLPLNTPVGN 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM K P+    D      + ++ ++++  L ++D+ +K IG+    DLL
Sbjct: 65  VMCKTPRTAERDWGRERILSVMEKYSLLQLPIIDEKRKVIGLQTLHDLL 113


>gi|302519581|ref|ZP_07271923.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB78]
 gi|318058049|ref|ZP_07976772.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SA3_actG]
 gi|318081521|ref|ZP_07988837.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SA3_actF]
 gi|302428476|gb|EFL00292.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. SPB78]
          Length = 500

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 49/192 (25%), Positives = 68/192 (35%), Gaps = 13/192 (6%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           V+  A   +              P  SA M       +AIA+            VLH   
Sbjct: 27  VSDMAPDEIDTSSRLSKNVRLNIPLVSAAMDKVTEARMAIAMARQGGVG-----VLHRNL 81

Query: 212 KLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            +         V  S          V     L +A  I ++ R   V VVD   KL GI+
Sbjct: 82  SIEDQANQVDLVKRSESGMVTDPITVNPDATLQEADAICAKFRISGVPVVDGAGKLLGIV 141

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T  D+   F  D  +  V +VM   P V  +       AM LLR+H I  L +VDD    
Sbjct: 142 TNRDM--AFETD-RSRKVREVMTPMPLVTGKVGISGVDAMGLLRRHKIEKLPLVDDAGVL 198

Query: 327 IGIVHFLDLLRF 338
            G++   D ++ 
Sbjct: 199 KGLITVKDFVKA 210


>gi|217075546|gb|ACJ86133.1| unknown [Medicago truncatula]
          Length = 224

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 57/155 (36%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M   D +  VK    + +A+  L E R     V+D+  KL G++++ D+  
Sbjct: 60  NGVYTVGDFMTKKDELHTVKPTTTVDEALDSLVEHRITGFPVIDDNWKLVGVVSDYDLLA 119

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   + ++M   P V+ E T L  A
Sbjct: 120 LDSISGQGQTDNSLFPDVDSTWKTFNEVQRLQSKTNGKVIGELMTTAPMVVRETTNLEDA 179

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   + +GI+   +++R  +
Sbjct: 180 ARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAAL 214


>gi|315185782|gb|EFU19548.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6578]
          Length = 481

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 18/181 (9%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLG 214
           +  E         P  SA M       +AIAL       +  RN S          G++ 
Sbjct: 31  VEVELHPRLRLNIPILSAAMDTVTEKEMAIALALEGGLGVIHRNLSPE-----EQAGQVA 85

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +    + ++ S  +   V+ G  + +A  ++ +     + VVDE   L GI+T  D+  
Sbjct: 86  AVKRYLNWIIESPIT---VRKGQTVREAKALMQQYNISGLPVVDEKGTLCGILTGRDLR- 141

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F KD   L VE+VM  +P V      +  A +   +H +  L +VD+  K IG+V   D
Sbjct: 142 -FVKD-ERLKVEEVMTPDPVVERGRPTIDQAQEAFDRHKVEKLPLVDETGKLIGLVTVKD 199

Query: 335 L 335
           +
Sbjct: 200 I 200


>gi|307947082|ref|ZP_07662417.1| inosine-5'-monophosphate dehydrogenase [Roseibium sp. TrichSKD4]
 gi|307770746|gb|EFO29972.1| inosine-5'-monophosphate dehydrogenase [Roseibium sp. TrichSKD4]
          Length = 500

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 14/175 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++        +      +                  PL
Sbjct: 46  NLPILSSAMDTVTEGRLAIAMAQAGGIG--VIHRNLSLDQQAEEVRRVKKFESGMVVNPL 103

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLS 284
           V      L  A+ ++       V VV+ G        +L GI+T  D+    + D     
Sbjct: 104 VIGPDATLQHALDLMKHYGISGVPVVENGGTGGQHTGRLVGILTNRDVRFASNPD---QK 160

Query: 285 VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M + N   + E      A +LL Q+ I  L+VVD  Q  IG++   D+ + 
Sbjct: 161 VYELMTRENLVTVRETVSQAEAKRLLHQNRIEKLLVVDKDQNCIGLITVKDIEKA 215


>gi|297802232|ref|XP_002869000.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314836|gb|EFH45259.1| hypothetical protein ARALYDRAFT_490898 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 236

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 62/156 (39%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +      + M   D + +VK    + +A+ +L E R     V+DE  KL G++++ D+ 
Sbjct: 71  RSGVYTVGEFMTKKDDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL 130

Query: 274 --------------------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTV 304
                                         K L+  +   V D+M   P V+ E T L  
Sbjct: 131 ALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLED 190

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A ++L +     L VVD   K +GI+   +++R  +
Sbjct: 191 AAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 226


>gi|254565947|ref|XP_002490084.1| hypothetical protein [Pichia pastoris GS115]
 gi|238029880|emb|CAY67803.1| Hypothetical protein PAS_chr1-1_0425 [Pichia pastoris GS115]
 gi|328350486|emb|CCA36886.1| Meiotically up-regulated gene 70 protein [Pichia pastoris CBS 7435]
          Length = 625

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 19/187 (10%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
           C  D  +    E         PT S      +   L+  +  ++  S N      PG   
Sbjct: 32  CKKDDAIRRRIEQGFKKRTSRPTGSTSPTRNVNGILSSPIKRNKTISRN---KHEPG--- 85

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                  + +        + K    + +A  ++  K+  C+ VVDE  +L GI T  D+ 
Sbjct: 86  -------TVMALKPSEPIICKPNYTVHEAAQLMGFKKENCILVVDENDELSGIFTAKDLA 138

Query: 274 -RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     L  N+ +V+ +M  +P      T  + A+ L+       L +VDD  + +GI+
Sbjct: 139 FRIVGSGLRANSTTVDAIMTPSPLCCKTTTKASEALNLMVTKGFRHLPIVDDTNQIVGIL 198

Query: 331 HFLDLLR 337
              D+ +
Sbjct: 199 ---DITK 202



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 6/116 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDI-FRNFH 277
           S V+        V +   + +A +++ + R   V V D     ++ GI T  D+  R   
Sbjct: 257 STVLDDTTLPVYVDVKSTVQEAASLMRDNRTTAVLVQDSNNDNEVTGIFTSKDVVLRVIA 316

Query: 278 KDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIV 330
            DLN    SV  VM   P     +  +  A++ + +     L ++D    + IGIV
Sbjct: 317 ADLNPKNCSVIRVMTPKPDYATSELSVHEALRKMFEGRYLNLPIIDPLSTEIIGIV 372



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 55/182 (30%), Gaps = 46/182 (25%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L         +M         K      +A+ ++  K F  + +VD
Sbjct: 132 FTAKDLAFRIVGSGLRANSTTVDAIMTPSPLCC--KTTTKASEALNLMVTKGFRHLPIVD 189

Query: 259 EGQKLKGI--ITE-------------------GDIFRNFHKDLNTLSVEDV--------- 288
           +  ++ GI  IT+                    D     + +L      +V         
Sbjct: 190 DTNQIVGILDITKCYNEAMSKLERMYESSKKLYDALEGVNSELQAQQPLEVIQYFENLKR 249

Query: 289 M------------IKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLD 334
           M               P  +   + +  A  L+R +  + ++V D  +  +  GI    D
Sbjct: 250 MIDGPNLSTVLDDTTLPVYVDVKSTVQEAASLMRDNRTTAVLVQDSNNDNEVTGIFTSKD 309

Query: 335 LL 336
           ++
Sbjct: 310 VV 311


>gi|303245552|ref|ZP_07331835.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
 gi|302492815|gb|EFL52680.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
          Length = 220

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLN 281
           K    ++ A  ++ E  +  + VVD+  +L GI+++ DI                +  L+
Sbjct: 15  KPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + + D+M K    +  D  +  A  LL +HN+  L VVDD  K +G++   D+ +
Sbjct: 75  EIKIGDIMTKTVVAVTPDDTVEKAAVLLLRHNVGGLPVVDDDNKVVGVITDSDIFK 130



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M K+P      T +  A ++++++    L VVDD  + +GIV   D+   
Sbjct: 3   IKDWMSKSPVTAKPATSIMKAAKMMKENGYHRLPVVDDNGRLVGIVSDRDIKEA 56



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     +  A  +L     G + VVD+  K+ G+IT+ DIF+  
Sbjct: 89  VTPDDTVEKAAVLLLRHNVGGLPVVDDDNKVVGVITDSDIFKVL 132


>gi|253680817|ref|ZP_04861620.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum D
           str. 1873]
 gi|253562666|gb|EES92112.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum D
           str. 1873]
          Length = 487

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +    +    V    + +  
Sbjct: 44  NIPVLSAGMDTVTESKMAIAVAREGGIG-----IIHKNMSIERQAMEVDRVKRQENGVIT 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ ++++ R   V +     KL GIIT  DI   F  +    +++++
Sbjct: 99  DPFHLSPDNTVQDALDLMAKYRISGVPIT-TDGKLVGIITNRDI--AFETN-YQQAIKNI 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E+T +  A ++L+ H I  L +VD      G++   D+
Sbjct: 155 MTSENLITAPENTTVEEAKEILKGHKIEKLPLVDKDNNLKGLITIKDI 202


>gi|329115348|ref|ZP_08244102.1| Inosine-5'-monophosphate dehydrogenase [Acetobacter pomorum DM001]
 gi|326695327|gb|EGE47014.1| Inosine-5'-monophosphate dehydrogenase [Acetobacter pomorum DM001]
          Length = 501

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 51/217 (23%), Positives = 79/217 (36%), Gaps = 29/217 (13%)

Query: 143 AITSENKSVV--ACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGD 187
           ++TS   S V  A   D VL +P   +  P                 P  SA M     D
Sbjct: 9   SMTSSPYSRVTEALAFDDVLVVPAASDVVPSQTTVRTHLTRSIELNIPLVSAAMDTVTED 68

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAI 243
            +AIA+ +          V+H   +          V      + +    V     L +  
Sbjct: 69  QMAIAMAQQGGLG-----VIHKNLQPEEQAEQVRRVKRFESGMVVNPVTVGPDQTLAEVR 123

Query: 244 TILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PKVILEDTL 301
            I+       + VV+ G QKL GI+T  D       +     V ++M K+    +     
Sbjct: 124 DIMHRHGISGLPVVEPGTQKLVGILTNRDARFAVDPN---QPVSELMTKDRLITVKNGVD 180

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              A QLL +H I  L+VVDD  + +GI+   D+ + 
Sbjct: 181 ADTARQLLHKHRIEKLLVVDDADRCVGIITVKDMDKA 217


>gi|21218764|ref|NP_624543.1| hypothetical protein SCO0210 [Streptomyces coelicolor A3(2)]
 gi|5777683|emb|CAB53434.1| hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 213

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KDLNTLSVEDVMI 290
             P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM 
Sbjct: 11  TTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMS 70

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR
Sbjct: 71  SPAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLR 117



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +N       T     ++LL +H IS + V+DD  K +G+V   DL+R 
Sbjct: 1   MSRNVVRAGRTTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRA 50



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D                 +           V     + DA  ++  +    + VVDE  +
Sbjct: 46  DLVRAQAHRAGRRPARAVTAADVMSSPAITVHPEQTVPDAARLMERRGVERLPVVDEEDR 105

Query: 263 LKGIITEGDIFRNFHK---DLNTLSVEDV 288
           L GI T  D+ R F +   D+      +V
Sbjct: 106 LIGIATRRDLLRVFLRTDDDIRDQVTAEV 134


>gi|320449248|ref|YP_004201344.1| CBS domain-containing protein [Thermus scotoductus SA-01]
 gi|320149417|gb|ADW20795.1| CBS domain containing protein [Thermus scotoductus SA-01]
          Length = 143

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 60/122 (49%), Gaps = 5/122 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
              ++  G  +  V     +++A+  L+E   G + V+ EG++L GI +E D  R     
Sbjct: 4   RQVLLRKGGGVYSVHPQATVLEALRKLAEHDIGALLVM-EGERLLGIFSERDYARKLVLL 62

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      VE+VM +    +  +T L  AM+L+ +H +  L V+++  + +G+V   D +
Sbjct: 63  GRFSKGTRVEEVMTREVITVTPETTLQEAMRLMTEHRVRHLPVLEE-GRVVGVVSIGDAV 121

Query: 337 RF 338
           + 
Sbjct: 122 KA 123



 Score = 43.3 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+        LG               +  V     L +A+ +++E R   + V+ 
Sbjct: 50  FSERDYA--RKLVLLGRFSKGTRVEEVMTREVITVTPETTLQEAMRLMTEHRVRHLPVL- 106

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  ++ G+++ GD  +  
Sbjct: 107 EEGRVVGVVSIGDAVKAI 124


>gi|205371959|ref|ZP_03224778.1| inositol-5-monophosphate dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 488

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AI++            ++H    +      
Sbjct: 30  VDLSVALTDTLKLNIPVISAGMDTVTEHQMAISIARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIF 273
              V  S   +            + DA  ++S+ R   V +V+    +KL GI+T  D+ 
Sbjct: 85  VDKVKRSESGVITNPFYLTPENQVFDAEHLMSKYRISGVPIVNNSSDRKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++S+ +VM K N       T L  A Q+L+Q+ I  L ++D+     G++  
Sbjct: 145 --FIQD-YSISINEVMTKENLITAPVGTTLKEAEQILQQYKIEKLPLIDEEGTLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|331220075|ref|XP_003322713.1| CBS and PB1 domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
 gi|309301703|gb|EFP78294.1| CBS and PB1 domain-containing protein [Puccinia graminis f. sp.
           tritici CRL 75-36-700-3]
          Length = 746

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA  + + KR  CV VVDE + L GI T  D+         D  T  V  +M
Sbjct: 139 VPDNITVADASQLCAAKRTDCVLVVDEDEHLCGIFTAKDLAFRVIGDGMDPRTTPVSAIM 198

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP V  + T  T A+  +       L V +D    IG++   D+ +
Sbjct: 199 TRNPMVTRDTTSATEALTTMVTRGFRHLPVCNDEGDVIGLL---DITK 243



 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 7/121 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDI-FRNFHKD 279
            ++ +  S   V +   + +A  ++ E     V V++   + + GI T  DI  R     
Sbjct: 306 SILDARTSAATVGVKTSVKEAAVLMREHHTTAVCVMESDGRRIAGIFTSKDIVLRVIAAG 365

Query: 280 LNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +  V  VM  +P   L    +  A++ +   +   L VVD+  +  G V   D+L+
Sbjct: 366 LDARTCSVVRVMTPHPDTALPSLSIQEALRKMHDGHYLNLPVVDEAGQLQGCV---DVLK 422

Query: 338 F 338
            
Sbjct: 423 L 423



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 28/191 (14%), Positives = 59/191 (30%), Gaps = 58/191 (30%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  +       S +M       + +      +A+T +  + F  + V +
Sbjct: 173 FTAKDLAFRVIGDGMDPRTTPVSAIMTRNPM--VTRDTTSATEALTTMVTRGFRHLPVCN 230

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL------------SVEDVMI--------KNPKVILE 298
           +   + G++   DI + FH+ L  L            ++E V            P  +  
Sbjct: 231 DEGDVIGLL---DITKVFHESLEKLERAYGSSQKLYNAIEGVQSEFGSGGRGTTPGAVNP 287

Query: 299 --------------------------------DTLLTVAMQLLRQHNISVLMVVDDCQ-K 325
                                            T +  A  L+R+H+ + + V++    +
Sbjct: 288 LMAYVEALRNKMSFPDLGSILDARTSAATVGVKTSVKEAAVLMREHHTTAVCVMESDGRR 347

Query: 326 AIGIVHFLDLL 336
             GI    D++
Sbjct: 348 IAGIFTSKDIV 358



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 18/41 (43%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++  +  A QL        ++VVD+ +   GI    DL
Sbjct: 138 TVPDNITVADASQLCAAKRTDCVLVVDEDEHLCGIFTAKDL 178



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 25/69 (36%), Gaps = 2/69 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D  +      L         VM       L      + +A+  + +  +  + VVD
Sbjct: 352 FTSKDIVLRVIAAGLDARTCSVVRVMTPHPDTAL--PSLSIQEALRKMHDGHYLNLPVVD 409

Query: 259 EGQKLKGII 267
           E  +L+G +
Sbjct: 410 EAGQLQGCV 418


>gi|227820956|ref|YP_002824926.1| inosine 5'-monophosphate dehydrogenase [Sinorhizobium fredii
           NGR234]
 gi|227339955|gb|ACP24173.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium fredii
           NGR234]
          Length = 514

 Score = 93.8 bits (232), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 60  NLPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNLTPAEQAEEVRQVKKFESGMVVNPVT 118

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA++++       + VV+ G        +L GI+T  D+         +  +
Sbjct: 119 IGPDATLADALSLMKAHGISGIPVVENGGSGGQTQGRLVGILTNRDVRFASDP---SQKI 175

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E      A +LL +H I  L+VVD   + +G++   D+
Sbjct: 176 YELMTRENLVTVKESVDQQEAKRLLHKHRIEKLLVVDPDGRCVGLITVKDI 226


>gi|256790247|ref|ZP_05528678.1| hypothetical protein SlivT_37693 [Streptomyces lividans TK24]
          Length = 213

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KDLNTLSVEDVMI 290
             P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM 
Sbjct: 11  TTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMS 70

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR
Sbjct: 71  SPAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLR 117



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +N       T     ++LL +H IS + V+DD  K +G+V   DL+R 
Sbjct: 1   MSRNVVRAARTTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRA 50



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D                 +           V     + DA  ++  +    + VVDE  +
Sbjct: 46  DLVRAQAHRAGRRPARAVTAADVMSSPAITVHPEQTVPDAARLMERRGVERLPVVDEEDR 105

Query: 263 LKGIITEGDIFRNFHK---DLNTLSVEDV 288
           L GI T  D+ R F +   D+      +V
Sbjct: 106 LIGIATRRDLLRVFLRTDDDIRDQVTAEV 134


>gi|237750426|ref|ZP_04580906.1| inositol-5-monophosphate dehydrogenase [Helicobacter bilis ATCC
           43879]
 gi|229373956|gb|EEO24347.1| inositol-5-monophosphate dehydrogenase [Helicobacter bilis ATCC
           43879]
          Length = 481

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M        AIA+            ++H    + +       V  S     +
Sbjct: 40  NIPFVSAAMDTVTEHKSAIAMARLGGIG-----IIHKNMDIESQVKEIRKVKKSESGIIN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  I+       V VVD  + L GI+T  D    F  D N L V +V
Sbjct: 95  DPVFITADKTLNDAELIMQTYSISGVPVVDSNKCLIGILTNRDTR--FETDFNKL-VGEV 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+P         L  A  ++ ++ I  L +VD+     G++   D+ +
Sbjct: 152 MTKSPLITAHVGISLEKAKDIMHKNRIEKLPLVDENNVLHGLITIKDIQK 201


>gi|311739985|ref|ZP_07713819.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudogenitalium ATCC 33035]
 gi|311305058|gb|EFQ81127.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           pseudogenitalium ATCC 33035]
          Length = 506

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 19/172 (11%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        +   + +        
Sbjct: 54  VPLASAAMDTVTEARMAIAMARQGGIGVLHRNLSTED--------QAEQVEIVKRSESGM 105

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                  +    + +   + +  R   + VVDE   L GI T  D+   F  D +   V 
Sbjct: 106 VTDPITARPDMTIGEVDALCARYRISGLPVVDEDGTLVGICTNRDMR--FEPDFDR-KVS 162

Query: 287 DVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM   P V+  E      A++LL  + +  L +VD   K  G++   D ++
Sbjct: 163 EVMTAMPLVVAREGVSKKEALELLSANKVEKLPIVDADNKLTGLITVKDFVK 214


>gi|145295429|ref|YP_001138250.1| hypothetical protein cgR_1366 [Corynebacterium glutamicum R]
 gi|140845349|dbj|BAF54348.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 622

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
                 ++DA   + E     + V     +LKGIIT+ D+  R   KDL+  L V +VM 
Sbjct: 168 CSPDTTIMDAAIKMDEFGVSSLLV-QIDGELKGIITDRDMRSRVVAKDLDIQLPVTEVMT 226

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P+      L   AM L+ +  I  L +VDD  +  GIV   D++R 
Sbjct: 227 VDPRCATSQGLAFEAMLLMSELRIHHLPIVDD-GQISGIVTAADIMRL 273



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +A+ ++SE R   + +VD+  ++ GI+T  DI R    D   L+ +
Sbjct: 240 EAMLLMSELRIHHLPIVDD-GQISGIVTAADIMRLLRHDPIYLTAD 284



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + +     +    + +  I NP     DT +  A   + +  +S L+V     +  GI+ 
Sbjct: 144 LRQESSSKVLRTKLGEFKIANPISCSPDTTIMDAAIKMDEFGVSSLLV-QIDGELKGIIT 202

Query: 332 FLDLLRFGII 341
             D+ R  ++
Sbjct: 203 DRDM-RSRVV 211


>gi|289774120|ref|ZP_06533498.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289704319|gb|EFD71748.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 222

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KDLNTLSVEDVMI 290
             P  + + +L   R   V V+D+  K+ G+++  D+ R        +    ++  DVM 
Sbjct: 20  TTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRAQAHRAGRRPARAVTAADVMS 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  +  +  A +L+ +  +  L VVD+  + IGI    DLLR
Sbjct: 80  SPAITVHPEQTVPDAARLMERRGVERLPVVDEEDRLIGIATRRDLLR 126



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +V +VM +N       T     ++LL +H IS + V+DD  K +G+V   DL+R 
Sbjct: 3   SRTVGEVMSRNVVRAARTTPFKEVVRLLDRHRISGVPVLDDDDKVLGVVSGTDLVRA 59



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 28/89 (31%), Gaps = 3/89 (3%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D                 +           V     + DA  ++  +    + VVDE  +
Sbjct: 55  DLVRAQAHRAGRRPARAVTAADVMSSPAITVHPEQTVPDAARLMERRGVERLPVVDEEDR 114

Query: 263 LKGIITEGDIFRNFHK---DLNTLSVEDV 288
           L GI T  D+ R F +   D+      +V
Sbjct: 115 LIGIATRRDLLRVFLRTDDDIRDQVTAEV 143


>gi|171700533|gb|ACB53514.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 145

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V    PL +A+ IL+EK+   + VVD+  KL GII+E D+             
Sbjct: 1   MTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQETGVEPPPYI 60

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + K+++     +V +VM   P  I     L  A  L+ +  I  L 
Sbjct: 61  MILDSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMHEKKIRRLP 120

Query: 319 VVDDCQ-KAIGIVHFLDLLR 337
           V+D+   K IGI+   D++R
Sbjct: 121 VIDENNTKVIGILTQGDIIR 140



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKD 279
           +K    L +A  ++ EK+   + V+DE   K+ GI+T+GDI R   ++
Sbjct: 98  IKGTKSLKEAAHLMHEKKIRRLPVIDENNTKVIGILTQGDIIRTMAQE 145


>gi|312866880|ref|ZP_07727093.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parasanguinis
           F0405]
 gi|311097663|gb|EFQ55894.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parasanguinis
           F0405]
          Length = 490

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 42  NIPIITAAMDTVTESQMAIAMARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 97  DPFYLTPSHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 153

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 154 NHMTSENLVTAPVGTDLETAERILQEHRIEKLPLVDENGRLSGLITIKDI 203


>gi|269925732|ref|YP_003322355.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269789392|gb|ACZ41533.1| protein of unknown function DUF190 [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 426

 Score = 93.8 bits (232), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/154 (24%), Positives = 62/154 (40%), Gaps = 23/154 (14%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +   HPG +L  + +          +   + +  P++DAI +L  + F  + V+D  + +
Sbjct: 107 YGEFHPGRELRNIRIK----EIMTPNPISINVSSPIVDAIELLYNQVFKALPVIDNEKHV 162

Query: 264 KGIITEGDI-------------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
            G+IT  D+                    ++ H      SV  VM K    I +D     
Sbjct: 163 LGVITSSDLVNQGILPFYLPLLDKTDVDKKDLHNKAYNSSVSSVMSKPAVTINQDATAQE 222

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A  L+    I  L VVDD  K +GIV  +D+L  
Sbjct: 223 AANLMASKKIKRLPVVDDQDKLVGIVSRVDILAA 256



 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 31/143 (21%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +     SD+MH+   +P V +G P++D +  L E     + VVDE  K+KGII   D+  
Sbjct: 274 SSSTKVSDIMHTQ--VPTVDLGAPILDVVKGLLESPIHRLIVVDEQNKVKGIIGSSDLMN 331

Query: 275 NFH-------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                                       + +   + ED+M +    I  D  ++ A +L+
Sbjct: 332 AVSSHNRAGIMEILRAQILRDERSMEHIRKIRARTAEDIMNREVVCISADADISSAAELM 391

Query: 310 --RQHNISVLMVVDDCQKAIGIV 330
             ++  I  L VVDD  K +G++
Sbjct: 392 VKQRKKI--LPVVDDSGKLVGVI 412



 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L      +S           +       +A  +++ K+   + VVD+  KL GI++  
Sbjct: 192 KDLHNKAYNSSVSSVMSKPAVTINQDATAQEAANLMASKKIKRLPVVDDQDKLVGIVSRV 251

Query: 271 DIF------RNFHKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DI       +   +DL       ++  V D+M      +     +   ++ L +  I  L
Sbjct: 252 DILAAAMHTKAREEDLKPPSQISSSTKVSDIMHTQVPTVDLGAPILDVVKGLLESPIHRL 311

Query: 318 MVVDDCQKAIGIVHFLDLL-------RFGII 341
           +VVD+  K  GI+   DL+       R GI+
Sbjct: 312 IVVDEQNKVKGIIGSSDLMNAVSSHNRAGIM 342



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 6/83 (7%)

Query: 265 GIITEGDIFRNF------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           G+IT  D+  +        ++L  + ++++M  NP  I   + +  A++LL       L 
Sbjct: 95  GLITVEDVDVHSYGEFHPGRELRNIRIKEIMTPNPISINVSSPIVDAIELLYNQVFKALP 154

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           V+D+ +  +G++   DL+  GI+
Sbjct: 155 VIDNEKHVLGVITSSDLVNQGIL 177


>gi|144900074|emb|CAM76938.1| Inosine-5'-monophosphate dehydrogenase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 486

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/172 (25%), Positives = 74/172 (43%), Gaps = 14/172 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M       LAIAL ++         V+H    +         V      + + 
Sbjct: 40  IPLISAAMDTVTESRLAIALAQAGGIG-----VIHKNLDILAQAAEVRMVKKFESGMVVN 94

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +    PL +A+ ++++ +   + VV+ G +KL GIIT  D+   F  D++   V ++
Sbjct: 95  PVTIHPDQPLAEALRLMADFKISGIPVVERGTRKLVGIITNRDVR--FASDVHQ-PVAEL 151

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K+    + E      A +LL QH I  L+VVD   +  G+V   D+ +  
Sbjct: 152 MTKDKLVTVREGVDKEEAKRLLHQHRIEKLLVVDGEYRCTGLVTVKDIEKAK 203


>gi|227828450|ref|YP_002830230.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831205|ref|YP_002832985.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580094|ref|YP_002838494.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581246|ref|YP_002839645.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|229585679|ref|YP_002844181.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620642|ref|YP_002915468.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284998708|ref|YP_003420476.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457653|gb|ACP36340.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227460246|gb|ACP38932.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228010810|gb|ACP46572.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228011962|gb|ACP47723.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228020729|gb|ACP56136.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381712|gb|ACR42800.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284446604|gb|ADB88106.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323475529|gb|ADX86135.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478244|gb|ADX83482.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 131

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVEDVMIKN 292
           K    + DA  I+ ++  G + +VDE  +  GI+TE DI R    + L    V  +M K 
Sbjct: 15  KAEISIRDAAKIMKKENLGSLIIVDETNRPIGIVTERDILRAVADEILLDSPVSTIMTKG 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I  +  +T A+ ++ Q+N+  L VV    + +G++   D  + 
Sbjct: 75  LITIAPNKDITEALIIMYQNNVRHLAVVGQNGELVGVISIRDAAKA 120



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 33/54 (61%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D++++NP     +  +  A +++++ N+  L++VD+  + IGIV   D+LR 
Sbjct: 3   VADLIVRNPVTAKAEISIRDAAKIMKKENLGSLIIVDETNRPIGIVTERDILRA 56


>gi|325266713|ref|ZP_08133389.1| transcriptional regulator HexR [Kingella denitrificans ATCC 33394]
 gi|324981822|gb|EGC17458.1| transcriptional regulator HexR [Kingella denitrificans ATCC 33394]
          Length = 287

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 7/173 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      L     +L+     +   A+  +   + R+   G+G SG +          
Sbjct: 96  KVLGNTAAALLGARRTLKE---GELDKAIAMLMRAR-RIEFYGVGNSGIVAQDAQHKFFR 151

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              +++  D+++V+S SGSS E+   +  A+     +IAIT   
Sbjct: 152 FGISTVAYSDTHIQLMAAAVLSPQDVLVVISNSGSSIEVLDAVRIAKENGAQVIAIT-RG 210

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            S +A  AD VL +  + +S  +   P  S ++QLAI D LAI L      + 
Sbjct: 211 GSPLAQLADCVLVMAVQEDSDRY--TPMISRLLQLAIIDILAIGLALRLGETA 261


>gi|322392438|ref|ZP_08065898.1| inosine-5'-monophosphate dehydrogenase [Streptococcus peroris ATCC
           700780]
 gi|321144430|gb|EFX39831.1| inosine-5'-monophosphate dehydrogenase [Streptococcus peroris ATCC
           700780]
          Length = 492

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIVTAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAHQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEANELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A ++L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLETAERILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|305663736|ref|YP_003860024.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304378305|gb|ADM28144.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 127

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           VK    + +A  I+     G + +VD+  KL GI+TE DI R   + +   + V+ +M  
Sbjct: 13  VKEDVTIGEASKIMDGNNIGSLPIVDDNGKLIGIVTERDIVRAISRGVKLDIPVKHIMST 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V   D  +      + ++NI  + +VD+  K IGI+   D+LR+
Sbjct: 73  KLIVADRDENIVSIAIKMIENNIRHIPIVDNDHKLIGIISIRDVLRY 119



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  ED+M K P  + ED  +  A +++  +NI  L +VDD  K IGIV   D++R 
Sbjct: 1   MRAEDIM-KKPIAVKEDVTIGEASKIMDGNNIGSLPIVDDNGKLIGIVTERDIVRA 55


>gi|227546620|ref|ZP_03976669.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239621652|ref|ZP_04664683.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|312134014|ref|YP_004001353.1| guab [Bifidobacterium longum subsp. longum BBMN68]
 gi|317482069|ref|ZP_07941093.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|322691728|ref|YP_004221298.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JCM 1217]
 gi|227212937|gb|EEI80816.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis ATCC 55813]
 gi|239515527|gb|EEQ55394.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis CCUG 52486]
 gi|291516317|emb|CBK69933.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum F8]
 gi|311773319|gb|ADQ02807.1| GuaB [Bifidobacterium longum subsp. longum BBMN68]
 gi|316916428|gb|EFV37826.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium sp.
           12_1_47BFAA]
 gi|320456584|dbj|BAJ67206.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. longum JCM 1217]
          Length = 517

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 113 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDV 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 222


>gi|255555395|ref|XP_002518734.1| conserved hypothetical protein [Ricinus communis]
 gi|223542115|gb|EEF43659.1| conserved hypothetical protein [Ricinus communis]
          Length = 220

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 66/167 (39%), Gaps = 29/167 (17%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F  L   G          D M   + + +VK    + +A+  + EK+     VVD+  K
Sbjct: 46  NFSTLTNNGLPRNGMYTVGDFMTRKEDLYVVKTMTTVDEALEAMVEKKISGFPVVDDNWK 105

Query: 263 LKGIITEGDIF-----------------------RNFHKDLNTLS------VEDVMIKNP 293
           L G++++ D+                        + F++    L+      V D+M   P
Sbjct: 106 LVGVVSDYDLLALNSISGRNQSGTNLFPDTDSSWKTFNEMQKLLTKNNGKVVGDLMTPAP 165

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V+ E T L  A +LL       L VVD   K +G++   +++R  +
Sbjct: 166 LVVNETTNLEDAARLLLDTKYHRLPVVDGDGKLVGMIARENVVRAAL 212


>gi|294012546|ref|YP_003546006.1| IMP dehydrogenase [Sphingobium japonicum UT26S]
 gi|292675876|dbj|BAI97394.1| IMP dehydrogenase [Sphingobium japonicum UT26S]
          Length = 485

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 63/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPILSSAMDTVTEADMAIVMAQLGGIG-----VLHRNLSVEEQADAVRAVKRFESGMVV 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  +++  +   + VV+   KL GI+T  D+      +     V ++
Sbjct: 94  NPITITPNATLADAQMLMTRHKISGIPVVEASGKLVGILTNRDVRFA---ENPAQPVSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +        AM+LL Q  I  L+VVDD    +G++   D+ + 
Sbjct: 151 MTHDNLATVKTGVGQEEAMRLLHQRRIEKLLVVDDQYHCVGLITVKDIEKA 201


>gi|330830490|ref|YP_004393442.1| nucleotidyl transferase [Aeromonas veronii B565]
 gi|328805626|gb|AEB50825.1| Nucleotidyl transferase [Aeromonas veronii B565]
          Length = 353

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 52/102 (50%), Gaps = 1/102 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              ++     + DA+ +++E+      VVD+ + L G++T+GD+ R    +++ T SV  
Sbjct: 6   EKVVLSPEHSVRDALAVINEEALRVCLVVDDARHLLGVVTDGDVRRAILNNVSLTQSVTA 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           VM  +P  +         ++ +R  ++  L VVDD  K IG+
Sbjct: 66  VMNPSPITVSAKLTRAQLLETMRARSVLSLPVVDDAGKLIGL 107



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 2/52 (3%)

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M KN    V+  +  +  A+ ++ +  + V +VVDD +  +G+V   D+ R 
Sbjct: 1   MSKNWEKVVLSPEHSVRDALAVINEEALRVCLVVDDARHLLGVVTDGDVRRA 52


>gi|320450872|ref|YP_004202968.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
 gi|320151041|gb|ADW22419.1| acetoin utilization AcuB protein [Thermus scotoductus SA-01]
          Length = 210

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 56/118 (47%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           V    P+++AI +L  K F  + VV +  KL G++T+ D+                   L
Sbjct: 14  VAPDTPVLEAINLLKNKGFRRLPVV-KDGKLVGLVTDKDLKDAMPSKATTLSVWEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L+V++VM K    +  D  L  A  L+ +  I  L V+D  +K +GI+   D+LR 
Sbjct: 73  SRLTVQEVMAKPVITVEADAPLEKAALLMEEKKIGGLPVMD-GEKLVGIITVTDVLRA 129



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M K+P  +  DT +  A+ LL+      L VV    K +G+V   DL
Sbjct: 3   VRDWMTKDPLTVAPDTPVLEAINLLKNKGFRRLPVV-KDGKLVGLVTDKDL 52



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+   PL  A  ++ EK+ G + V+D G+KL GIIT  D+ R F
Sbjct: 81  MAKPVITVEADAPLEKAALLMEEKKIGGLPVMD-GEKLVGIITVTDVLRAF 130


>gi|225350878|ref|ZP_03741901.1| hypothetical protein BIFPSEUDO_02452 [Bifidobacterium
           pseudocatenulatum DSM 20438]
 gi|225158334|gb|EEG71576.1| hypothetical protein BIFPSEUDO_02452 [Bifidobacterium
           pseudocatenulatum DSM 20438]
          Length = 514

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S +D        +   + +       
Sbjct: 57  KVPAISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 108

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    V     L D   +        + VVD   KL GIIT  D+     +D + L V
Sbjct: 109 MINDPLTVSPDVTLADLDKLCGRFHISGLPVVDNDNKLVGIITNRDMRFIASEDYDRLKV 168

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM + N      +     A  LL +H +  L +VDD     G++   D ++
Sbjct: 169 SEVMTRENLITGPSNISKEDAHDLLAKHKVEKLPLVDDEGHLTGLITVKDFVK 221


>gi|119872079|ref|YP_930086.1| signal transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673487|gb|ABL87743.1| putative signal transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 286

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +  + K    +   + +  EKR+  + VVDE  K  G++    +            V
Sbjct: 166 MTPNPVVAKPDDTIAPYVKLFIEKRYRGIPVVDENGKPIGLLMASKLMETLSLCKLDAKV 225

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +DVM+K+P  I ED  +  A++L+    I  L+VVD   + +GI+   D+LR
Sbjct: 226 KDVMVKDPPTIYEDEDIHEAIRLMVAGGIGRLLVVDSEDRLVGIITRTDILR 277



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +   SV+++M  NP V   D  +   ++L  +     + VVD+  K IG++
Sbjct: 157 IPRTSVKNIMTPNPVVAKPDDTIAPYVKLFIEKRYRGIPVVDENGKPIGLL 207



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 22/52 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                P +     + +AI ++     G + VVD   +L GIIT  DI R   
Sbjct: 229 MVKDPPTIYEDEDIHEAIRLMVAGGIGRLLVVDSEDRLVGIITRTDILRRIA 280


>gi|312137471|ref|YP_004004808.1| hypothetical protein Mfer_1260 [Methanothermus fervidus DSM 2088]
 gi|311225190|gb|ADP78046.1| protein of unknown function DUF39 [Methanothermus fervidus DSM
           2088]
          Length = 510

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 2/101 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            +      + E     V +VD+  KL+GI+T  DI     +    L  E++M K      
Sbjct: 406 SVESVAKKIVENNINHVPIVDKNNKLRGIVTSWDIANAVAEGTKKL--EEIMTKRVITAK 463

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+  + VA + + ++NIS L VVD   + IGIV   D+ R 
Sbjct: 464 ENEPIDVAARRMDKYNISGLPVVDKDNRVIGIVTAEDISRI 504



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DV  K   V      +    + + ++NI+ + +VD   K  GIV   D+   
Sbjct: 390 VKDVETKPAIVASISESVESVAKKIVENNINHVPIVDKNNKLRGIVTSWDIANA 443



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 22/46 (47%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           K   P+  A   + +     + VVD+  ++ GI+T  DI R   ++
Sbjct: 463 KENEPIDVAARRMDKYNISGLPVVDKDNRVIGIVTAEDISRIIGRE 508


>gi|261403356|ref|YP_003247580.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus
           vulcanius M7]
 gi|261370349|gb|ACX73098.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus
           vulcanius M7]
          Length = 495

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIAL            V+H    +         V  + +    
Sbjct: 44  NIPIISAAMDTVTEKEMAIALARLGGLG-----VIHRNMTIEEQVHQVQAVKKADEVVIK 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  V     + +AI ++       + VV+E  +L GIIT  D+      +  T  V++V
Sbjct: 99  DVITVSPDDTIEEAINVMETYSISGLPVVNEKDELIGIITHRDVK---AIEDKTKKVKEV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K      ED     AM+L+  + +  L +VDD  K IGI+   D+L+
Sbjct: 156 MTKEVVSAKEDVEEEEAMELMYANRVERLPIVDDDNKLIGIITLRDILK 204


>gi|220930942|ref|YP_002507850.1| CBS domain containing protein [Halothermothrix orenii H 168]
 gi|219992252|gb|ACL68855.1| CBS domain containing protein [Halothermothrix orenii H 168]
          Length = 262

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     +++A  ++S    G + VV++   L GI+T+GD+      DLN   +
Sbjct: 7   MSKDPITISPETTVVEAEKLMSINNIGRLIVVEDEG-LVGILTDGDLV--IQHDLN-API 62

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M +    I ++  +  A ++L  H I  L V+D+  K +GIV   D++
Sbjct: 63  DKFMSREVITISQNATVQEAAKVLSDHGIGGLPVLDEDGKLVGIVTADDIV 113



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 32/52 (61%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M K+P  I  +T +  A +L+  +NI  L+VV+D    +GI+   DL+
Sbjct: 3   VKNIMSKDPITISPETTVVEAEKLMSINNIGRLIVVEDEG-LVGILTDGDLV 53



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  +    + A         +  +     + +A  +LS+   G + V+DE  KL GI+T 
Sbjct: 50  GDLVIQHDLNAPIDKFMSREVITISQNATVQEAAKVLSDHGIGGLPVLDEDGKLVGIVTA 109

Query: 270 GDI 272
            DI
Sbjct: 110 DDI 112


>gi|220913332|ref|YP_002488641.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter
           chlorophenolicus A6]
 gi|219860210|gb|ACL40552.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter
           chlorophenolicus A6]
          Length = 503

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/206 (20%), Positives = 71/206 (34%), Gaps = 13/206 (6%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           LI +T ++  ++  H D++                  P  SA M       +AIA+    
Sbjct: 11  LIGLTYDDVLLLPGHTDVIPSDADTSSRISKRITVQTPLLSAAMDTVTESRMAIAMARQG 70

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGC 253
                   V+H    +         V  S   +      ++    L +   + ++ R   
Sbjct: 71  GLG-----VVHRNLSIADQADQVDRVKRSESGMITNPLTIRPEATLRELDDLCAQYRVSG 125

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQH 312
           + VVDE  +L GI+T  D       D     V DVM K P V          A   L  +
Sbjct: 126 LPVVDEANRLLGIVTNRDTRFVPESDFPLRLVSDVMTKMPLVTGHVGISRDEASHKLATN 185

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  L +VD+  +  G++   D  + 
Sbjct: 186 KIEKLPLVDEQGRLKGLITTKDFTKA 211


>gi|213425285|ref|ZP_03358035.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
          Length = 328

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|189440761|ref|YP_001955842.1| IMP dehydrogenase/GMP reductase [Bifidobacterium longum DJO10A]
 gi|189429196|gb|ACD99344.1| IMP dehydrogenase/GMP reductase [Bifidobacterium longum DJO10A]
          Length = 517

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 113 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDV 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 222


>gi|148643689|ref|YP_001274202.1| IMP dehydrogenase/GMP reductase, GuaB [Methanobrevibacter smithii
           ATCC 35061]
 gi|222444828|ref|ZP_03607343.1| hypothetical protein METSMIALI_00441 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350599|ref|ZP_05976016.1| inosine-5'-monophosphate dehydrogenase [Methanobrevibacter smithii
           DSM 2374]
 gi|148552706|gb|ABQ87834.1| IMP dehydrogenase/GMP reductase, GuaB [Methanobrevibacter smithii
           ATCC 35061]
 gi|222434393|gb|EEE41558.1| hypothetical protein METSMIALI_00441 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861382|gb|EFC93680.1| inosine-5'-monophosphate dehydrogenase [Methanobrevibacter smithii
           DSM 2374]
          Length = 493

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 71/184 (38%), Gaps = 18/184 (9%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGK 212
           +    +         P  SA M       LAIA+ +        RN ++          +
Sbjct: 32  IDTKIKLGKDIKLNIPILSAAMDTVTESDLAIAMAQEGGVGVIHRNITQE--------KQ 83

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  +    S    +   +  +     + D    ++++    + VVD  + + GII++ DI
Sbjct: 84  VEEVKKVKSAEDLTIRDVITITPDSTIADVQAKMNDELISGLPVVDNDE-IIGIISKRDI 142

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                K ++  +V+D+M  +   + E      A+ +  ++ +  L V+    K +GI+  
Sbjct: 143 RPVLKKGVDK-TVKDIMTSDVVTVEEPITAEEALNIAYENKVERLPVL-RDGKLVGIITI 200

Query: 333 LDLL 336
            D+L
Sbjct: 201 KDIL 204


>gi|307705895|ref|ZP_07642733.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK597]
 gi|307620556|gb|EFN99654.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK597]
          Length = 492

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLITAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|90410671|ref|ZP_01218686.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90410704|ref|ZP_01218719.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90328302|gb|EAS44600.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
 gi|90328335|gb|EAS44633.1| mannose-1-phosphate guanyltransferase [Photobacterium profundum
           3TCK]
          Length = 353

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 1/113 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M    +  L+K    + DA+ I++ +    V VVD  + L+G++T+GDI R    +L  T
Sbjct: 1   MSHCWNNVLIKPTNTIRDALEIINNEALRVVLVVDHHEHLQGVVTDGDIRRGLLNNLALT 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  VM  NP     +T     + +++ + I  L +VDD  + +G+     L
Sbjct: 61  AEITQVMNSNPMTADVNTPRDELIAIMKSNGILSLPLVDDENRVVGLETLHHL 113



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           N  +I     +  A++++    + V++VVD  +   G+V   D+ R G++
Sbjct: 6   NNVLIKPTNTIRDALEIINNEALRVVLVVDHHEHLQGVVTDGDI-RRGLL 54


>gi|229542418|ref|ZP_04431478.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
 gi|229326838|gb|EEN92513.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
          Length = 282

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 6/189 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +T       K+S      +     K+ + S  SSL      +   A   ++  + +VV 
Sbjct: 81  HMTDFSILQQKDSPYDLFQKVTYGNKKAIESCVSSLDRR---ELEKAANVLENAR-KVVF 136

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G S              G  S F          +  + + D+ + LS SG + ++  
Sbjct: 137 FGVGGSVTAAVDACYKFTRLGCQSIFSQDYHYLISLIPYMNKMDVFVALSVSGRTKDVLE 196

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +  +A+R    +IAIT+  KS +   ADI L  P   E    G   T+S + QL I DAL
Sbjct: 197 LADFAKRKGAKVIAITNMEKSPLYKEADIRLCTPITEEDFRIGT--TSSRMAQLNIIDAL 254

Query: 190 AIALLESRN 198
            +++ + + 
Sbjct: 255 YLSVFQRKG 263


>gi|332158854|ref|YP_004424133.1| hypothetical protein PNA2_1213 [Pyrococcus sp. NA2]
 gi|331034317|gb|AEC52129.1| hypothetical protein PNA2_1213 [Pyrococcus sp. NA2]
          Length = 392

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 17/150 (11%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           ND  +L              +   + + I L      +  A+ ++ +     + +VDE  
Sbjct: 114 NDIALLERVVAEEFGKKKVEE-FMTKEVITLTPEDT-VAKALAVMRDHGISRIPIVDEEG 171

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDV---------------MIKNPKVILEDTLLTVAM 306
           KL+G++T  D+   F K        ++               MI+    IL D  +  A+
Sbjct: 172 KLEGLVTLHDLILRFIKPRFRAQAGELVGEKIPPFSMKLREAMIRGVITILPDASVREAV 231

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ++ +NI  L+VVD+  K +GI+   DLL
Sbjct: 232 ATMKDNNIDGLVVVDENNKVVGILTVKDLL 261



 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V       P++K    L  A  +L E     + V +   ++ G+I +  +  R  
Sbjct: 64  PTKAKVRDVYKPAPVLKPTDDLSHAAKLLLETDLRSLPVGESKAEIIGVINDIALLERVV 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     VE+ M K    +  +  +  A+ ++R H IS + +VD+  K  G+V   DL+
Sbjct: 124 AEEFGKKKVEEFMTKEVITLTPEDTVAKALAVMRDHGISRIPIVDEEGKLEGLVTLHDLI 183



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHKDLNTLSVEDVMIK 291
           + I  PL +AI I+ ++    + V D G   KG++T +  I  +   D     V DV   
Sbjct: 17  IDISAPLSEAIGIIEKEDPDLILVFD-GNVYKGVLTQDLIIRSHLKWDPTKAKVRDVYKP 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            P V+     L+ A +LL + ++  L V +   + IG+++
Sbjct: 76  AP-VLKPTDDLSHAAKLLLETDLRSLPVGESKAEIIGVIN 114


>gi|313672101|ref|YP_004050212.1| inosine-5'-monophosphate dehydrogenase [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312938857|gb|ADR18049.1| inosine-5'-monophosphate dehydrogenase [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 487

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 69/168 (41%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +           +H    +         V  S   + +
Sbjct: 41  NIPIVSAAMDTVTEAKMAIAIAQEGGIG-----FIHKNMSIEEQAEEVDKVKRSESGMIV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  + DA+ ++++ +   + V+ +  KL GI+T  D+      D     +++ 
Sbjct: 96  DPITIESGSTVEDALKLMAKYKISGIPVI-KNSKLVGILTNRDLRFV---DRFNEPIDNF 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N   +   T L  A + L++H I  L+VVDD     G++   D+
Sbjct: 152 MTKENLVTVPVGTSLEEAKKHLQEHRIEKLLVVDDNYNLKGLITIKDI 199



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           D   + +++  V +G  L +A   L E R   + VVD+   LKG+IT  DI +  
Sbjct: 149 DNFMTKENLVTVPVGTSLEEAKKHLQEHRIEKLLVVDDNYNLKGLITIKDINKKL 203


>gi|28572253|ref|NP_789033.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei
           TW08/27]
 gi|28410384|emb|CAD66770.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei
           TW08/27]
          Length = 491

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +A+A+            V+H    +       + V  S   +  
Sbjct: 43  SAPLVSAAMDTVTESGMAVAMARLGGVG-----VIHRNMSIADQAEHVTRVKLSESGMIT 97

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +     S  +     VVDE   L GI+T  D++   H+   ++ V +V
Sbjct: 98  RPVSVSPDLTLEEVEQRCSRYKISGFPVVDEDNTLLGIVTSRDMWPYRHEHRASVRVSEV 157

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++P      +     A  LL +H +  L +VD+  +  G++   D +
Sbjct: 158 MTRSPLITASPNISSEEARDLLYKHRLEKLPLVDEHGRLFGLITVKDFV 206


>gi|294101968|ref|YP_003553826.1| inosine-5'-monophosphate dehydrogenase [Aminobacterium colombiense
           DSM 12261]
 gi|293616948|gb|ADE57102.1| inosine-5'-monophosphate dehydrogenase [Aminobacterium colombiense
           DSM 12261]
          Length = 491

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       LAIA+            V+H    +         V  S   I +
Sbjct: 45  NAPICSAAMDTVTDGRLAIAIAREGGLG-----VVHRNMPIERQAKEVDMVKRSEAGIIV 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTLSVE 286
                     +  A+ ++       V +VD  QKL GIIT  D+    NF +D++ L   
Sbjct: 100 DPFFLHPQDKVKQAVELMEHYHISGVPIVDHSQKLVGIITNRDLRFVTNFEQDISAL--- 156

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             M         E T L  A  +L +H I  L +VD   K  G++   D+ +  
Sbjct: 157 --MTHERLITGPEGTTLEEAKDILMRHKIEKLPLVDKNNKLKGLITIKDIQKVK 208


>gi|55980798|ref|YP_144095.1| putative acetoin dehydrogenase [Thermus thermophilus HB8]
 gi|55772211|dbj|BAD70652.1| putative acetoin utilization protein, acetoin dehydrogenase
           [Thermus thermophilus HB8]
          Length = 210

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                 +V    P+++AI +L EK F  + V+ EG +L G++T+ D+             
Sbjct: 7   MTKDPVVVAPDTPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L+V +VM +    +  D  L  A  L+ +  I  L V+ + ++ +GI+   
Sbjct: 66  WEMNYLLAKLTVREVMARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVT 124

Query: 334 DLLRF 338
           D+LR 
Sbjct: 125 DVLRA 129



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M K+P V+  DT +  A++LL++     L V+ +  + +G+V   DL
Sbjct: 3   VRDWMTKDPVVVAPDTPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDL 52



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+   PL  A  ++ E++ G + V+ EG++L GIIT  D+ R F
Sbjct: 81  MARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVTDVLRAF 130


>gi|319784200|ref|YP_004143676.1| inosine-5'-monophosphate dehydrogenase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317170088|gb|ADV13626.1| inosine-5'-monophosphate dehydrogenase [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 500

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++            P  +   +            +   
Sbjct: 46  NVPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNFSPAEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA+ ++       + VV+ G        +L GI+T  D+            V
Sbjct: 105 IGPDATLADALGLMRSYSISGIPVVENGGSGGHKIGRLIGILTNRDVRFASDP---AQKV 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E+     A +LL QH I  L+VVD     +G++   D+
Sbjct: 162 HELMTRDNLITVKENVDQDEAKRLLHQHRIEKLVVVDRQGNCVGLITVKDI 212


>gi|226365668|ref|YP_002783451.1| inosine 5'-monophosphate dehydrogenase [Rhodococcus opacus B4]
 gi|226244158|dbj|BAH54506.1| inosine-5'-monophosphate dehydrogenase [Rhodococcus opacus B4]
          Length = 507

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 43/204 (21%), Positives = 70/204 (34%), Gaps = 16/204 (7%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI--------MQLAIGDALAIALLESRN 198
              +++    D VL LP      P  +  ++           +  +  D +  A +    
Sbjct: 16  NKVAMLGLTYDDVLLLPAASNVIPGQVDTSSQLTRDIRLRVPLVSSAMDTVTEARMAIAM 75

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCV 254
                  VLH    +         V  S           K    L +     +  R   +
Sbjct: 76  ARAGGMGVLHRNLSVEAQAGQVETVKRSEAGMVTDPVTCKPSDTLAEVDAKCARFRISGL 135

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHN 313
            V D   +L GIIT  D+     ++    +V +VM K P     E     VA+ LLR+H 
Sbjct: 136 PVTDAAGQLVGIITNRDMRFEVDQN---RAVSEVMTKAPLITAQEGVTAEVALGLLRRHK 192

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L +VD   K  G++   D ++
Sbjct: 193 IEKLPIVDGQGKLTGLITVKDFVK 216


>gi|123441371|ref|YP_001005358.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|122088332|emb|CAL11123.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
          Length = 280

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     ++AEK    +L ++L      +   A++ +++ + RV++TG+G S
Sbjct: 85  NQILSTDSLKTVGEKLLAEKAA--ALRATLDINSEQRLTEALDMLRSAR-RVILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|187931967|ref|YP_001891952.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           mediasiatica FSC147]
 gi|187712876|gb|ACD31173.1| IMP dehydrogenase/GMP reductase [Francisella tularensis subsp.
           mediasiatica FSC147]
          Length = 486

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H    +         V    + + +
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGIG-----IIHKNMSIQAQAQEVKKVKRFENGMVI 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + + + +  E  F    VVD+  K+ GI+T  D    F KDL+   V  +
Sbjct: 96  DPITIKQESAIKEIMQLAKEHNFSGFPVVDDNNKIIGIVTRRDFR--FAKDLDE-PVSSI 152

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + ED       + L +H I  L+VV++  + +G++   D+ R
Sbjct: 153 MTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIER 203



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  V            L E +   + VV+E  +L G+IT  DI R+ +K
Sbjct: 149 VSSIMTPREKLVTVPEDASQGAIKKKLHEHKIEKLLVVNEQGELVGLITTKDIERSQNK 207


>gi|46198785|ref|YP_004452.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
 gi|46196408|gb|AAS80825.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
          Length = 210

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                 +V    P+++AI +L EK F  + V+ EG +L G++T+ D+             
Sbjct: 7   MTKDPVVVAPDTPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L+V +VM +    +  D  L  A  L+ +  I  L V+ + ++ +GI+   
Sbjct: 66  WEMNYLLAKLTVREVMARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVT 124

Query: 334 DLLRF 338
           D+LR 
Sbjct: 125 DVLRA 129



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M K+P V+  DT +  A++LL++     L V+ +  + +G+V   DL
Sbjct: 3   VRDWMTKDPVVVAPDTPVLEAIRLLKEKGFRRLPVM-EGGRLVGLVTDKDL 52



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+   PL  A  ++ E++ G + V+ EG++L GIIT  D+ R F
Sbjct: 81  MARPVVTVEADAPLEKAALLMEERKIGGLPVM-EGERLVGIITVTDVLRAF 130


>gi|319957395|ref|YP_004168658.1| 6-phospho 3-hexuloisomerase [Nitratifractor salsuginis DSM 16511]
 gi|319419799|gb|ADV46909.1| 6-phospho 3-hexuloisomerase [Nitratifractor salsuginis DSM 16511]
          Length = 177

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 9/180 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           +  +  L+ LE  L       F   +++++  K R+ I G G+SG++G   A  L   G 
Sbjct: 1   MIAEEILNDLERILSKTDEKAFERFLDRLQPGK-RIFIAGAGRSGYVGKCFAMRLMHLGY 59

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +F V            I  DDL++ +S SG++D +      A       +A+T++  S 
Sbjct: 60  EAFVVGETNTP-----SIRPDDLLLAISSSGTTDSVVNAAKKALSHGAETLALTADTSSP 114

Query: 152 VACHADIVLTLPK-EPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
           +A  +D V+ +P  +P+       P  S     A    +A    L++    +E +    H
Sbjct: 115 LAQKSDFVIYIPSNDPKEDGSSPLPLGSKFELSALLFLEAAVSELMKHYGITEEEMKSRH 174


>gi|54022862|ref|YP_117104.1| inosine 5'-monophosphate dehydrogenase [Nocardia farcinica IFM
           10152]
 gi|54014370|dbj|BAD55740.1| putative inosine-5'-monophosphate dehydrogenase [Nocardia farcinica
           IFM 10152]
          Length = 489

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                   +    L +   + +  R   + VVDE   L GIIT  D+     ++     V
Sbjct: 88  MVTDPVTCRPTDTLAEVDAMCARFRISGLPVVDETGALVGIITNRDMRFEVDQNRR---V 144

Query: 286 EDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM K P     E      A+ LLR+H +  L +VD   +  G++   D ++
Sbjct: 145 ADVMTKAPLITAQEGVTAEAALGLLRRHKVEKLPIVDGNGRLRGLITVKDFVK 197


>gi|51894052|ref|YP_076743.1| inosine-5'-monophosphate dehydrogenase [Symbiobacterium
           thermophilum IAM 14863]
 gi|51857741|dbj|BAD41899.1| inosine-5'-monophosphate dehydrogenase [Symbiobacterium
           thermophilum IAM 14863]
          Length = 486

 Score = 93.4 bits (231), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 64/173 (36%), Gaps = 14/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   I +
Sbjct: 42  NIPLVSAAMDTVTEARMAIAMAREGGIG-----IIHKSMSIERQAEEVDKVKRSEHGIIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     +  A+ +++  R     VV+ G  KL GI+T  D+     +D     V +
Sbjct: 97  DPVFVHPDDMIETALQLMARYRISGTPVVERGTHKLVGILTNRDLRF---EDNWNQPVGN 153

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VM + N       T L  A ++LR   +  L +VD+     G++   D+ +  
Sbjct: 154 VMTRENLITAPVGTTLEQAREILRHAKVEKLPLVDEHGVLKGLITIKDIEKAK 206


>gi|269126276|ref|YP_003299646.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
 gi|268311234|gb|ACY97608.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
          Length = 227

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 21/126 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           V+   P ++ + ++ E R   V VVD  +++ GI++E D+                    
Sbjct: 17  VRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLLHKQEFGGPRRTPSGLLGAL 76

Query: 273 -FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             R        ++   +M      +        A +++ +H +  L V DD  + +GIV 
Sbjct: 77  RRRRAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMARHKVDQLPVTDDDGRLVGIVA 136

Query: 332 FLDLLR 337
             D+LR
Sbjct: 137 RSDVLR 142



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 30/52 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M +N   +  +T     ++L+ +H I  + VVD  ++ IGIV   DLL
Sbjct: 6   VQELMTENVVSVRAETPFVEIVELIEEHRIDAVPVVDADRRVIGIVSESDLL 57



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 11/67 (16%), Positives = 24/67 (35%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +        +        +  V       +A  I++  +   + V D+  +L GI+   D
Sbjct: 80  RAQAKAGAVNARGLMTTPVITVSPQATAAEAARIMARHKVDQLPVTDDDGRLVGIVARSD 139

Query: 272 IFRNFHK 278
           + R F +
Sbjct: 140 VLRVFLR 146


>gi|184200324|ref|YP_001854531.1| inosine-5'-monophosphate dehydrogenase [Kocuria rhizophila DC2201]
 gi|183580554|dbj|BAG29025.1| inosine-5'-monophosphate dehydrogenase [Kocuria rhizophila DC2201]
          Length = 507

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
            AP  SA M      A+AI++            V+H    +         V  S      
Sbjct: 51  QAPVLSAAMDTVTESAMAISMARQGG-----MGVIHRNLSIQDQADHVDRVKRSESGMIT 105

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   V     L +   +    +   + VVDE Q+L GIIT  D       D +T  V DV
Sbjct: 106 NPVTVSPDATLAELDRLCGYYKVSGLPVVDEDQRLLGIITNRDTRYLPESDFDTRLVRDV 165

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   P V  +       A  LL QH I  L +VD+  +  G++   D  + 
Sbjct: 166 MTPMPLVTGKVGMGKDEAHALLAQHKIEKLPLVDEQDRLTGLITVKDFTKA 216


>gi|332162684|ref|YP_004299261.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|325666914|gb|ADZ43558.1| putative DNA-binding transcriptional regulator [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860311|emb|CBX70625.1| uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           enterocolitica W22703]
          Length = 280

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     ++AEK    +L ++L      +   A++ +++ + RV++TG+G S
Sbjct: 85  NQILSTDSLKTVGEKLLAEKAA--ALRATLDINSEQRLTEALDMLRSAR-RVILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|306826175|ref|ZP_07459510.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
 gi|304431651|gb|EFM34632.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. oral
           taxon 071 str. 73H25AP]
          Length = 492

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|296132833|ref|YP_003640080.1| inosine-5'-monophosphate dehydrogenase [Thermincola sp. JR]
 gi|296031411|gb|ADG82179.1| inosine-5'-monophosphate dehydrogenase [Thermincola potens JR]
          Length = 484

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            ++H    +    +    V  S   +  
Sbjct: 43  NIPLMSAGMDTVTESRLAIAIAREGGIG-----IIHKNMSIDQQALEVDRVKRSEHGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A++++   R   V +     KL GI+T  D+    + D     + +V
Sbjct: 98  DPIYLSPENSIREALSLMERYRISGVPITV-NNKLVGILTNRDLRFVENYD---RPIGEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N       T L  A  +L++H +  L +VD+     G++   D+ + 
Sbjct: 154 MTRENLITAPVGTTLEEAKAILQKHKVEKLPIVDENFNLKGLITIKDIEKA 204


>gi|255728581|ref|XP_002549216.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
 gi|240133532|gb|EER33088.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
          Length = 618

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 57/138 (41%), Gaps = 6/138 (4%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS---DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           E+D       G   T    A+    +        + K    + +   +++ KR  CV VV
Sbjct: 29  EHDLNKKKKNGTTSTRRRKATPGTVLSLKPSDPIICKTTSTVYEVSQLMTAKRENCVLVV 88

Query: 258 DEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           DE  +L GI T  D+  R     LN   ++++ +M K+P     +     A+ L+ +   
Sbjct: 89  DEVGQLLGIFTAKDLAFRIVGSGLNANQVTIDQIMTKDPICANANNAAGEALTLMVEKGF 148

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L V+DD    +G++  
Sbjct: 149 RHLPVLDDDNHIVGVLDI 166



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 50/130 (38%), Gaps = 6/130 (4%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K         +V+          +   + +A  ++ E R   V V D   ++ GI T  D
Sbjct: 215 KNKMNGPTLENVLDFHTEPIYTNVKASVFEATILMKENRTTAVLVKDTNDEVAGIFTSKD 274

Query: 272 I-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  R     L+    S+  VM   P V      +  A++ +   +   L VV D  + IG
Sbjct: 275 VVLRVIAAGLDPKKCSIVRVMTPQPDVAHVSLPVPEALRKMFDGHYLNLPVVGDEDEIIG 334

Query: 329 IVHFLDLLRF 338
           IV   D+L+ 
Sbjct: 335 IV---DVLKL 341


>gi|20094305|ref|NP_614152.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887351|gb|AAM02082.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 138

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 57/129 (44%), Gaps = 5/129 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                                    +I+A  I+ +   G + VVD+  +L G++T  D+ 
Sbjct: 4   REKLRGCKVEELMTKDPITASPQVGVIEAFEIMLKHDVGALPVVDDEGRLIGLVTRTDLG 63

Query: 274 RNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNI-SVLMVVDDCQKAIG 328
           R   +D      +VE+VM ++  V+  D  L  A++ +      I + L VVDD +K +G
Sbjct: 64  RALLEDEYEPGTTVEEVMERDVVVVHPDDTLLEALKRMTSAPEGIYNQLPVVDDEEKLVG 123

Query: 329 IVHFLDLLR 337
           I+   D+LR
Sbjct: 124 ILTDGDILR 132



 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F + L    VE++M K+P        +  A +++ +H++  L VVDD  + IG+V   DL
Sbjct: 3   FREKLRGCKVEELMTKDPITASPQVGVIEAFEIMLKHDVGALPVVDDEGRLIGLVTRTDL 62

Query: 336 LRF 338
            R 
Sbjct: 63  GRA 65



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 3/58 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC---VAVVDEGQKLKGIITEGDIFRNFHKDL 280
               + +V     L++A+  ++    G    + VVD+ +KL GI+T+GDI R   K L
Sbjct: 81  MERDVVVVHPDDTLLEALKRMTSAPEGIYNQLPVVDDEEKLVGILTDGDILRWIAKKL 138


>gi|28493042|ref|NP_787203.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei str.
           Twist]
 gi|28476082|gb|AAO44172.1| inosine-5'-monophosphate dehydrogenase [Tropheryma whipplei str.
           Twist]
          Length = 491

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 64/169 (37%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +A+A+            V+H    +       + V  S   +  
Sbjct: 43  SAPLVSAAMDTVTESGMAVAMARLGGVG-----VIHRNMSIADQAEHVTRVKLSESGMIT 97

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +     S  +     VVDE   L GI+T  D++   H+   ++ V +V
Sbjct: 98  RPVSVSPDLTLEEVEQRCSRYKISGFPVVDEDNTLLGIVTSRDMWPYRHEHRASVRVSEV 157

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++P      +     A  LL +H +  L +VD+  +  G++   D +
Sbjct: 158 MTRSPLITASPNISSEEARDLLYKHRLEKLPLVDEHGRLFGLITVKDFV 206


>gi|15234564|ref|NP_195409.1| LEJ2 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 2) [Arabidopsis
           thaliana]
 gi|75219197|sp|O23193|CBSX1_ARATH RecName: Full=CBS domain-containing protein CBSX1, chloroplastic;
           AltName: Full=CBS domain-containing protein 2;
           Short=AtCDCP2; AltName: Full=Protein LOSS OF THE TIMING
           OF ET AND JA BIOSYNTHESIS 2; Short=AtLEJ2; Flags:
           Precursor
 gi|4006881|emb|CAB16799.1| putative protein [Arabidopsis thaliana]
 gi|7270640|emb|CAB80357.1| putative protein [Arabidopsis thaliana]
 gi|21537376|gb|AAM61717.1| unknown [Arabidopsis thaliana]
 gi|28392900|gb|AAO41886.1| unknown protein [Arabidopsis thaliana]
 gi|28827758|gb|AAO50723.1| unknown protein [Arabidopsis thaliana]
 gi|332661316|gb|AEE86716.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
           thaliana]
          Length = 236

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +      + M   + + +VK    + +A+ +L E R     V+DE  KL G++++ D+ 
Sbjct: 71  RSGVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDEDWKLVGLVSDYDLL 130

Query: 274 --------------------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTV 304
                                         K L+  +   V D+M   P V+ E T L  
Sbjct: 131 ALDSISGSGRTENSMFPEVDSTWKTFNAVQKLLSKTNGKLVGDLMTPAPLVVEEKTNLED 190

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A ++L +     L VVD   K +GI+   +++R  +
Sbjct: 191 AAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 226


>gi|19704566|ref|NP_604128.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
 gi|19714854|gb|AAL95427.1| Inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 25586]
          Length = 487

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGMGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 99  ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|315221609|ref|ZP_07863529.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           F0211]
 gi|315189443|gb|EFU23138.1| inosine-5'-monophosphate dehydrogenase [Streptococcus anginosus
           F0211]
          Length = 493

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESKMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++   R   V VV+  E +KL GIIT  D+   F  D N     
Sbjct: 100 DPFFLTPIHTVSDAEELMERYRISGVPVVETLENRKLVGIITNRDMR--FITDYNQPISA 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  KN       T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 158 HMTSKNLVTAPVGTDLETAERILHEHRIEKLPLVDDYGRLSGLITIKDI 206


>gi|296327812|ref|ZP_06870350.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
 gi|296155068|gb|EFG95847.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. nucleatum ATCC 23726]
          Length = 487

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGMGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 99  ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|329769545|ref|ZP_08260954.1| inosine-5'-monophosphate dehydrogenase [Gemella sanguinis M325]
 gi|328838629|gb|EGF88229.1| inosine-5'-monophosphate dehydrogenase [Gemella sanguinis M325]
          Length = 487

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 68/186 (36%), Gaps = 15/186 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L        +   P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLKVSLTEKLNLSIPVISAAMDTVTEHKMAIAMAREGGLG-----VIHKNMTIEEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + +A  ++ + R   V +V+  E  K+ GIIT  D+ 
Sbjct: 85  VIKVKRSESGVITDPFFLTPDSKVYEAEELMQQYRISGVPIVNNREDMKVVGIITNRDMR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D+    + DVM K +      +T L  A  +LR H I  L++ D+  +  G++  
Sbjct: 145 FLTDFDI---VINDVMTKEHLVTAPANTTLEEASVILRGHKIEKLILTDEAGRLTGLITI 201

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 202 KDIEKL 207


>gi|325958962|ref|YP_004290428.1| Homoserine O-acetyltransferase [Methanobacterium sp. AL-21]
 gi|325330394|gb|ADZ09456.1| Homoserine O-acetyltransferase [Methanobacterium sp. AL-21]
          Length = 489

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 78/176 (44%), Gaps = 7/176 (3%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L +  + +         +  I+     + + ++  E ++   +D +++  G     +   
Sbjct: 308 LVISVDSDWLY--PPSLSRDIVMGLNANDINVSYCEIKSSYGHDAFLIEAGQLNYLIAGF 365

Query: 220 ASDVMHSGDS---IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            SD +         P +K    +  A  ++  ++   + VV +   L GI+T  DI ++ 
Sbjct: 366 LSDTLVKDVMAKEFPKIKEKSSIEHAAELMLHEKVTHLPVVTDNSTLLGIVTAWDISKSV 425

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            ++   L  +D+M K   V+  +  + +A + +++++IS L VVD+ +  IGIV  
Sbjct: 426 ARNYKEL--DDIMTKEVIVVSPEDPIELAARKMKKYSISSLPVVDESETVIGIVTM 479



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 33/72 (45%)

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +I  G +       L+   V+DVM K    I E + +  A +L+    ++ L VV D   
Sbjct: 352 LIEAGQLNYLIAGFLSDTLVKDVMAKEFPKIKEKSSIEHAAELMLHEKVTHLPVVTDNST 411

Query: 326 AIGIVHFLDLLR 337
            +GIV   D+ +
Sbjct: 412 LLGIVTAWDISK 423


>gi|224475543|ref|YP_002633149.1| putative inositol-monophosphate dehydrogenase [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222420150|emb|CAL26964.1| putative inositol-monophosphate dehydrogenase [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 488

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDRIKLNIPVVSAGMDTVTESKMAIAMARQGGLG-----VVHKNMNIEDQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E + L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPDEKVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K +       T L  A  +L++H I  L +  +  K  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEDLITAPVGTTLDEAEAILQKHKIEKLPLT-ENGKLKGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|307707885|ref|ZP_07644362.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis NCTC
           12261]
 gi|307616145|gb|EFN95341.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis NCTC
           12261]
          Length = 492

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|270291840|ref|ZP_06198055.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. M143]
 gi|293364504|ref|ZP_06611229.1| inosine-5'-monophosphate dehydrogenase [Streptococcus oralis ATCC
           35037]
 gi|315612171|ref|ZP_07887086.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           ATCC 49296]
 gi|270279368|gb|EFA25210.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. M143]
 gi|291317012|gb|EFE57440.1| inosine-5'-monophosphate dehydrogenase [Streptococcus oralis ATCC
           35037]
 gi|315315732|gb|EFU63769.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           ATCC 49296]
          Length = 492

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|322420873|ref|YP_004200096.1| CBS domain-containing protein [Geobacter sp. M18]
 gi|320127260|gb|ADW14820.1| CBS domain containing protein [Geobacter sp. M18]
          Length = 217

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 13/125 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +     + +A+ ++ EK+   + VVD   KL GI+++ D+ +          
Sbjct: 6   RMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKASPSSATSLA 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               H  L  L+VE  M K    + EDT L  A +++    I  L V+ + +K +GI+  
Sbjct: 66  IWEIHDLLAKLTVEKCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVM-NGEKLVGIITE 124

Query: 333 LDLLR 337
            DL +
Sbjct: 125 SDLFK 129



 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M  NP  I+ D  +T A++L+ +  I  L VVD   K +GIV   DLL+ 
Sbjct: 3   VRDRMTLNPITIIPDISVTEALRLMGEKKIRRLPVVDRSGKLVGIVSDRDLLKA 56



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 +  V    PL +A  I+ ++R G + V++ G+KL GIITE D+F+  
Sbjct: 80  KCMAKEVITVPEDTPLEEAARIMVDRRIGGLPVMN-GEKLVGIITESDLFKTL 131


>gi|57640493|ref|YP_182971.1| hypothetical protein TK0558 [Thermococcus kodakarensis KOD1]
 gi|57158817|dbj|BAD84747.1| hypothetical protein, conserved, containing CBS domains and PHD
           finger motif [Thermococcus kodakarensis KOD1]
          Length = 177

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
                LV+    +     IL+  + G   VVDE +++ GIIT+ DI        KD   +
Sbjct: 11  KRKAVLVRPDDTIHKVARILARNKVGSAVVVDENEEIVGIITDRDILDKVVAKGKDPKKV 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+DVM   P  I +D  +  A+  +    I  L+V     K IG V   DLL  
Sbjct: 71  LVKDVMTTKPVTIEDDYTIQDAIDKMMDKGIRRLLVT-RVGKPIGFVTAADLLAA 124



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 31/57 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  ++V  V+ +   ++  D  +    ++L ++ +   +VVD+ ++ +GI+   D+L
Sbjct: 1   MAEITVGQVVKRKAVLVRPDDTIHKVARILARNKVGSAVVVDENEEIVGIITDRDIL 57


>gi|258542593|ref|YP_003188026.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256633671|dbj|BAH99646.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01]
 gi|256636730|dbj|BAI02699.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-03]
 gi|256639783|dbj|BAI05745.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-07]
 gi|256642839|dbj|BAI08794.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-22]
 gi|256645894|dbj|BAI11842.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-26]
 gi|256648947|dbj|BAI14888.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-32]
 gi|256651934|dbj|BAI17868.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-01-42C]
 gi|256654991|dbj|BAI20918.1| inosine-5'-monophosphate dehydrogenase [Acetobacter pasteurianus
           IFO 3283-12]
          Length = 492

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 6/168 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M     D +AIA+ +           L P  +   +            +   
Sbjct: 45  NIPLVSAAMDTVTEDQMAIAMAQQGGLGVIH-KNLQPEEQAEQVRRVKRFESGMVVNPVT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           V     L +   I+       + VV+ G QKL GI+T  D       +     V ++M K
Sbjct: 104 VGPDQTLAEVRDIMHRHGISGLPVVEPGTQKLVGILTNRDARFAVDPN---QPVSELMTK 160

Query: 292 N-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +        A QLL +H I  L+VVDD  + +GI+   D+ + 
Sbjct: 161 DRLITVKNGVDADTARQLLHKHRIEKLLVVDDADRCVGIITVKDMDKA 208


>gi|227518152|ref|ZP_03948201.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX0104]
 gi|227074395|gb|EEI12358.1| inositol-5-monophosphate dehydrogenase [Enterococcus faecalis
           TX0104]
          Length = 420

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 56/135 (41%), Gaps = 10/135 (7%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQ 261
           H    +         V  S   + +          + DA  ++S  R   V +V+  E +
Sbjct: 2   HKNMTVAQQADEVRKVKRSESGVIIDPFFLTPTNLVADAEELMSRYRISGVPIVETMENR 61

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           KL GIIT  D+          + +E+VM K +       T L  A ++L++H I  L +V
Sbjct: 62  KLVGIITNRDMRFVTD---YQIKIEEVMTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIV 118

Query: 321 DDCQKAIGIVHFLDL 335
           D+  +  G++   D+
Sbjct: 119 DEAGRLSGLITIKDI 133



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            + D +    +G  L DA  IL + +   + +VDE  +L G+IT  DI +   
Sbjct: 86  MTKDHLVTAPVGTSLKDAEKILQKHKIEKLPIVDEAGRLSGLITIKDIEKVIE 138


>gi|159026894|emb|CAO89145.1| eriC [Microcystis aeruginosa PCC 7806]
          Length = 875

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + ++    PL + + I+S        VV E  +L GI T+ D+ +   K+ +   +
Sbjct: 455 MQSQVEILAADLPLGEVVKIMSRSHHRGFPVV-EQGRLLGIFTQSDLDKWRSKN-SQTVL 512

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++M  NP  +     L+  + LL ++ +S L V D  QK +GI+   D++R
Sbjct: 513 REMMTPNPITVAPQAALSDVLFLLNRYQLSRLPVTD-GQKLVGIITRTDIIR 563



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 1/63 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K  +             +   V     L D + +L+  +   + V D GQKL GIIT  D
Sbjct: 502 KWRSKNSQTVLREMMTPNPITVAPQAALSDVLFLLNRYQLSRLPVTD-GQKLVGIITRTD 560

Query: 272 IFR 274
           I R
Sbjct: 561 IIR 563



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  LS  DVM    +++  D  L   ++++ + +     VV +  + +GI    DL
Sbjct: 446 LAHLSAMDVMQSQVEILAADLPLGEVVKIMSRSHHRGFPVV-EQGRLLGIFTQSDL 500


>gi|161529077|ref|YP_001582903.1| inosine-5'-monophosphate dehydrogenase [Nitrosopumilus maritimus
           SCM1]
 gi|160340378|gb|ABX13465.1| inosine-5'-monophosphate dehydrogenase [Nitrosopumilus maritimus
           SCM1]
          Length = 476

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 63/164 (38%), Gaps = 5/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++A+A+  +        ++         L V  S  +   ++   
Sbjct: 40  NIPFVSANMDTVTESSMAVAMARAGGIGIIHRFLTIQEQANEVLKVKRSGSVM-IENPYS 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA+    +K    + VVD   KL GI+TE D+           ++ DVM K+
Sbjct: 99  ISSDKSIQDALDYAEDKEISGLLVVDSNSKLVGIVTERDLLFAGSNG----TIADVMTKD 154

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                    L  A  +L +H I  L +VDD     G++   D+ 
Sbjct: 155 VVTAKPGVSLDEAKDILHKHRIEKLPIVDDSGIIQGLITSKDIT 198



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 22/52 (42%), Positives = 27/52 (51%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VMI+NP  I  D  +  A+       IS L+VVD   K +GIV   DLL  G
Sbjct: 91  VMIENPYSISSDKSIQDALDYAEDKEISGLLVVDSNSKLVGIVTERDLLFAG 142


>gi|218296612|ref|ZP_03497330.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
 gi|218242925|gb|EED09458.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
          Length = 150

 Score = 93.4 bits (231), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE----------------------- 269
           V +G  L +   ++ E+R G V VVD   +L GI+TE                       
Sbjct: 15  VPLGTNLEEVARLMVERRIGSVLVVDGEGRLVGIVTESDFLKERGIPFSTFRAPMLLGRF 74

Query: 270 --GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
             GD      ++  T  VE++M      +  +  L   + L+  ++I+ + VVD+  + +
Sbjct: 75  LNGDQLERLLQEARTTKVEEIMTSPVHAVGLEAPLREVLDLMLTYDINHVPVVDEAGRPV 134

Query: 328 GIVHFLDLLR 337
           GI+   DLLR
Sbjct: 135 GIISRFDLLR 144



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +D+M+     +   T L    +L+ +  I  ++VVD   + +GIV   D L+ 
Sbjct: 2   MKAKDLMVSPVVSVPLGTNLEEVARLMVERRIGSVLVVDGEGRLVGIVTESDFLKE 57



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 23/66 (34%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  V +  PL + + ++       V VVDE  +  GII+  D+ R
Sbjct: 85  QEARTTKVEEIMTSPVHAVGLEAPLREVLDLMLTYDINHVPVVDEAGRPVGIISRFDLLR 144

Query: 275 NFHKDL 280
                +
Sbjct: 145 PLQAQV 150


>gi|322377916|ref|ZP_08052404.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. M334]
 gi|321281092|gb|EFX58104.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. M334]
          Length = 492

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|270159634|ref|ZP_06188290.1| inosine-5'-monophosphate dehydrogenase [Legionella longbeachae
           D-4968]
 gi|289165580|ref|YP_003455718.1| IMP dehydrogenase/GMP reductase [Legionella longbeachae NSW150]
 gi|269987973|gb|EEZ94228.1| inosine-5'-monophosphate dehydrogenase [Legionella longbeachae
           D-4968]
 gi|288858753|emb|CBJ12658.1| putative IMP dehydrogenase/GMP reductase [Legionella longbeachae
           NSW150]
          Length = 490

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/173 (25%), Positives = 68/173 (39%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 42  NIPLVSAAMDTVTEARLAIALAQEGGIG-----IIHKNMTITAQADEVRKVKKFESGMVR 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   V     + + + ++ +  F  V VVD G+ L GI+T  DI   F  +L +LSVE V
Sbjct: 97  NPITVTPNITVRELLDVMEKYNFSGVPVVD-GEDLVGIVTSRDIR--FETNL-SLSVEQV 152

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M    K   + E       + LL +H I  L+VV+D     G++   D+ +  
Sbjct: 153 MTPKAKLVTVKEGASREEVLSLLHKHRIEKLLVVNDAFHLRGLITVKDIQKAK 205


>gi|307153353|ref|YP_003888737.1| CBS domain-containing protein [Cyanothece sp. PCC 7822]
 gi|306983581|gb|ADN15462.1| CBS domain containing protein [Cyanothece sp. PCC 7822]
          Length = 153

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/141 (24%), Positives = 59/141 (41%), Gaps = 28/141 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V    PL +AI +++EK+   + VV+E   L G+I+E D+             
Sbjct: 9   MTHNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLMWQETGVEPPPYI 68

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         + K+++     +V +VM   P  I     L  A QL+    I  L 
Sbjct: 69  MILDSVIYLQNPARYEKEIHKALGQTVGEVMSDKPISIKAYQPLREAAQLMHDKKIRRLP 128

Query: 319 VVDDCQ-KAIGIVHFLDLLRF 338
           V+D+ + K IGI+   D++R 
Sbjct: 129 VIDETEAKVIGIITRGDIIRA 149



 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 32/55 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V DVM  NP  +   T L+ A++L+ +  IS L VV++    +G++   DL+
Sbjct: 2   TKTVGDVMTHNPYTVTPQTPLSEAIKLMAEKKISGLPVVNEIGNLVGVISETDLM 56



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKD 279
           PL +A  ++ +K+   + V+DE + K+ GIIT GDI R    +
Sbjct: 111 PLREAAQLMHDKKIRRLPVIDETEAKVIGIITRGDIIRAMASN 153


>gi|161612658|ref|YP_001586623.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|161362022|gb|ABX65790.1| hypothetical protein SPAB_00354 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
          Length = 282

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATHCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|34762969|ref|ZP_00143947.1| Inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
 gi|27887357|gb|EAA24449.1| Inosine-5'-monophosphate dehydrogenase [Fusobacterium nucleatum
           subsp. vincentii ATCC 49256]
          Length = 488

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGMGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 100 ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 157 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|304570678|ref|YP_001805580.2| hypothetical protein cce_4166 [Cyanothece sp. ATCC 51142]
          Length = 153

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 61/148 (41%), Gaps = 28/148 (18%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
           +  +       +   V    PL +A+ IL+EK+   + VVD+  KL GII+E D+     
Sbjct: 1   MTKTVAQVMTQNPITVTPQTPLSEAVKILAEKKISGLPVVDDQGKLVGIISETDLMWQET 60

Query: 274 --------------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                 + K+++     +V +VM   P  I     L  A  L+ 
Sbjct: 61  GVEPPPYIMILDSVIYLQNPARYEKEVHKALGQTVGEVMSDKPISIKGTKSLKEAAHLMH 120

Query: 311 QHNISVLMVVDDCQ-KAIGIVHFLDLLR 337
           +  I  L V+D+   K IGI+   D++R
Sbjct: 121 EKKIRRLPVIDENNTKVIGILTQGDIIR 148



 Score = 43.0 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKD 279
           +K    L +A  ++ EK+   + V+DE   K+ GI+T+GDI R   ++
Sbjct: 106 IKGTKSLKEAAHLMHEKKIRRLPVIDENNTKVIGILTQGDIIRTMAQE 153


>gi|284992815|ref|YP_003411369.1| inosine-5'-monophosphate dehydrogenase [Geodermatophilus obscurus
           DSM 43160]
 gi|284066060|gb|ADB76998.1| inosine-5'-monophosphate dehydrogenase [Geodermatophilus obscurus
           DSM 43160]
          Length = 501

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 61/167 (36%), Gaps = 9/167 (5%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            P  S+ M       +AIA+           +       G++  +    + ++    +  
Sbjct: 52  VPLLSSAMDTVTEARMAIAMARVGGTGVLHRNLAAEEQAGQVDLVKRSEAGMV---TNPV 108

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
                  L +   + +  R     VVD    L GI+T  D+   F  D +   V DVM  
Sbjct: 109 TCSPDNTLAEVDALSARYRISGAPVVDADGVLVGIVTNRDMR--FETDQSVF-VRDVMTP 165

Query: 292 NPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            P V          A+ LLR++ I  L +VD   +  G++   D ++
Sbjct: 166 MPLVTAPVGVDADTALALLRKNKIEKLPLVDGAGRLRGLITVKDFVK 212


>gi|169831232|ref|YP_001717214.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638076|gb|ACA59582.1| inosine-5'-monophosphate dehydrogenase [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 485

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+            V+H    +    +    V  S   +  
Sbjct: 43  NIPLMSAGMDTVTEARLAIAMAREGGIG-----VIHRNMSIKKQALEVDKVKRSEHGVIT 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A T++   R   V V  E  KL GIIT  D+   F  D N   +E V
Sbjct: 98  DPIYLAPHNLISEANTLMGRYRISGVPVT-ENGKLVGIITNRDLR--FVTDFNQ-PIEQV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N       T L  A ++LR++ I  L +VD+     G++   D+ + 
Sbjct: 154 MTRENLITAPVGTTLEEAKEILRRYKIEKLPLVDEEYNLRGLITIKDIEKA 204


>gi|154249344|ref|YP_001410169.1| signal transduction protein [Fervidobacterium nodosum Rt17-B1]
 gi|154153280|gb|ABS60512.1| putative signal transduction protein with CBS domains
           [Fervidobacterium nodosum Rt17-B1]
          Length = 309

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 49/127 (38%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K+  +F            +  VK    +     IL  KR   V VVD+   + GII+  D
Sbjct: 7   KVQKVFANIKVEEFMNRDVIYVKPDRTVAQVKEILRLKRISGVPVVDDDGNVVGIISIED 66

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I ++         V+  M      + +D  L   ++   ++      VVDD  K +GIV 
Sbjct: 67  IIKSLENGTLHEKVDKHMTARVICLHKDMTLQEVIKQFERYKYGRFPVVDDDGKLVGIVT 126

Query: 332 FLDLLRF 338
             D+L  
Sbjct: 127 KNDILAA 133



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I     K    + VE+ M ++   +  D  +    ++LR   IS + VVDD    +GI+ 
Sbjct: 4   ILEKVQKVFANIKVEEFMNRDVIYVKPDRTVAQVKEILRLKRISGVPVVDDDGNVVGIIS 63

Query: 332 FLDLLR 337
             D+++
Sbjct: 64  IEDIIK 69



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 26/73 (35%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L    +      H    +  +     L + I      ++G   VVD+  KL GI+T+ 
Sbjct: 69  KSLENGTLHEKVDKHMTARVICLHKDMTLQEVIKQFERYKYGRFPVVDDDGKLVGIVTKN 128

Query: 271 DIFRNFHKDLNTL 283
           DI       L  L
Sbjct: 129 DILAAVATRLGLL 141


>gi|167765900|ref|ZP_02437953.1| hypothetical protein CLOSS21_00391 [Clostridium sp. SS2/1]
 gi|167712398|gb|EDS22977.1| hypothetical protein CLOSS21_00391 [Clostridium sp. SS2/1]
          Length = 184

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 16/181 (8%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAI------KGRVVITGIGKSGHIGSKLASTLASTGTP 92
            +LE  L+      F    E+I+ +        ++ +TG G+SG      A+ L   G  
Sbjct: 5   ENLEHILKELQDATFKIEEEQIENVLKLIAPDKKIFLTGKGRSGLAAKGFANRLMHLGFQ 64

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           ++ +      H   G     DL+I+ S SG +D L +I   A+   + L  +T   +S +
Sbjct: 65  AYVIGEISTPHTKAG-----DLLIITSGSGETDALVSIAKKAKESGLYLGLVTMNPQSTL 119

Query: 153 ACHADIVLTLP---KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVL 207
              AD ++ LP   K      H + P  S   Q++    DA+ + L+E+ N +    ++ 
Sbjct: 120 GKMADGMIILPGDSKGNNEEKHSIQPMGSQFEQMSFLIFDAIVLKLMENWNQTSEQMFMR 179

Query: 208 H 208
           H
Sbjct: 180 H 180


>gi|303243770|ref|ZP_07330111.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302486012|gb|EFL48935.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 312

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 46/105 (43%), Gaps = 1/105 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + DA  I  +       ++     L GI+T  D+       L   SVE +M KNP
Sbjct: 190 SPDTNIKDAAKIFYDNNINGAPII-SNGNLVGILTLHDLAYALSNSLENESVEKIMAKNP 248

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I  D  +  A+ L+ +  +  L+VVD   K IGI+   D+L+ 
Sbjct: 249 LTITPDKKVYDALILMEKQGVGRLIVVDKDSKVIGIITRTDVLKL 293



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       S       +   +     + DA+ ++ ++  G + VVD+  K+ GIIT  D
Sbjct: 230 ALSNSLENESVEKIMAKNPLTITPDKKVYDALILMEKQGVGRLIVVDKDSKVIGIITRTD 289

Query: 272 IFRNFHKDLNTLSVEDV 288
           + +     L    ++++
Sbjct: 290 VLKLIEGALFPKILKEL 306



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 280 LNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  ++V+ + IK +   +  DT +  A ++   +NI+   ++ +    +GI+   DL
Sbjct: 172 IPNITVKSIAIKEDLIWLSPDTNIKDAAKIFYDNNINGAPIISNGN-LVGILTLHDL 227


>gi|15616304|ref|NP_244609.1| hypothetical protein BH3742 [Bacillus halodurans C-125]
 gi|10176366|dbj|BAB07461.1| BH3742 [Bacillus halodurans C-125]
          Length = 643

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 4/133 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             K G        +        + V+    + +    + ++    V V+++  KL GIIT
Sbjct: 161 ANKWGESEPFIRRIQDVMTEPAVTVQEQALVQEVARKMMDEGTSSVIVLNDENKLSGIIT 220

Query: 269 EGDIF-RNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           E D+  R      +      +VM KNP  I        AM +   + I  L V ++  + 
Sbjct: 221 EKDLVGRVIASGQSKTQKAYEVMTKNPYTISRHAYYYEAMSMFLMNKIKHLPV-EEAGRP 279

Query: 327 IGIVHFLDLLRFG 339
           +G+V   DLL+  
Sbjct: 280 LGMVTLSDLLQKK 292


>gi|299820875|ref|ZP_07052764.1| IMP dehydrogenase [Listeria grayi DSM 20601]
 gi|299817896|gb|EFI85131.1| IMP dehydrogenase [Listeria grayi DSM 20601]
          Length = 488

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMTHAVKLNVPIWSAGMDTITESKMAIAIARQGGIG-----VIHKNMSIERQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++ + R   V +V+  E +KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFDAEHLMGKYRISGVPIVNNEEEKKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D  T+ +++VM K N       T L  A ++L++H I  L +VDD     G++  
Sbjct: 145 --FISDYATV-IKEVMTKENLVTAPVGTTLKQAEKILQKHRIEKLPLVDDNGTLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VD+   LKG+IT  DI +  
Sbjct: 149 YATVIKEVMTKENLVTAPVGTTLKQAEKILQKHRIEKLPLVDDNGTLKGLITIKDIEKVI 208

Query: 277 H 277
            
Sbjct: 209 E 209


>gi|254392009|ref|ZP_05007200.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294814531|ref|ZP_06773174.1| Inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442921|ref|ZP_08217655.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|197705687|gb|EDY51499.1| inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
 gi|294327130|gb|EFG08773.1| Inosine-5'-monophosphate dehydrogenase [Streptomyces clavuligerus
           ATCC 27064]
          Length = 500

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 41/188 (21%), Positives = 67/188 (35%), Gaps = 7/188 (3%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           +  A   +              P  SA M       +AIA+  +R       +       
Sbjct: 28  SEMAPDQIDTSSYLSRNVKVNIPLLSAAMDKVTESRMAIAM--ARQGGAGVLHRNLSIAD 85

Query: 213 LGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                           + P+ V     L +A  + ++ R   V V D   +L GI+T  D
Sbjct: 86  QANQVDLVKRSESGMVTDPITVHPEATLGEADELCAKFRISGVPVTDRSGRLLGIVTNRD 145

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +   F  D  +  V +VM   P V  +       AM+LLR+H I  L +VD+     G++
Sbjct: 146 M--AFESD-RSRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDEAGVLKGLI 202

Query: 331 HFLDLLRF 338
              D ++ 
Sbjct: 203 TVKDFVKA 210


>gi|115525270|ref|YP_782181.1| inosine 5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisA53]
 gi|115519217|gb|ABJ07201.1| inosine-5'-monophosphate dehydrogenase [Rhodopseudomonas palustris
           BisA53]
          Length = 497

 Score = 93.0 bits (230), Expect = 5e-17,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 64/172 (37%), Gaps = 10/172 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++              G+   +            +   
Sbjct: 45  NTPIIASAMDTVTEARMAIAMAQAGGIGVIH-RNFDVEGQAAQVRQVKKYESGMVVNPLT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++S+  F  + VV         KL GI+T  D+            + +
Sbjct: 104 IGPDALLGDALALMSDHGFSGIPVVTGASKGVPGKLVGILTNRDVRFATDP---KQKISE 160

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + +      A ++L QH I  L+VVDD  + +G++   D+ + 
Sbjct: 161 LMTHENLVTVRQGVSQDEAKKMLHQHRIEKLLVVDDQYRCVGLITVKDMEKA 212


>gi|18418376|ref|NP_567952.1| LEJ1 (LOSS OF THE TIMING OF ET AND JA BIOSYNTHESIS 1) [Arabidopsis
           thaliana]
 gi|75268156|sp|Q9C5D0|CBSX2_ARATH RecName: Full=CBS domain-containing protein CBSX2, chloroplastic;
           AltName: Full=CBS domain-containing protein 1;
           Short=AtCDCP1; AltName: Full=Protein LOSS OF THE TIMING
           OF ET AND JA BIOSYNTHESIS 1; Short=AtLEJ1; Flags:
           Precursor
 gi|13430838|gb|AAK26041.1|AF360331_1 unknown protein [Arabidopsis thaliana]
 gi|15810601|gb|AAL07188.1| unknown protein [Arabidopsis thaliana]
 gi|332660926|gb|AEE86326.1| cystathionine beta-synthase domain-containing protein [Arabidopsis
           thaliana]
          Length = 238

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 66/161 (40%), Gaps = 32/161 (19%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P    G       D M    ++ +VK    + DA+ +L EK+   + V+D+   L G+++
Sbjct: 71  PAKNGG---YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127

Query: 269 EGDIF------------RNFHKDLNTL-----------------SVEDVMIKNPKVILED 299
           + D+              N   D+++                   V D+M  +P V+ + 
Sbjct: 128 DYDLLALDSISGRSQNDTNLFPDVDSTWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDS 187

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T L  A +LL +     L VVD   K IGI+   +++R  +
Sbjct: 188 TNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVRAAL 228


>gi|46190983|ref|ZP_00120794.2| COG0516: IMP dehydrogenase/GMP reductase [Bifidobacterium longum
           DJO10A]
          Length = 487

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 28  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 82

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 83  DPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDV 142

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 143 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 192


>gi|318606790|emb|CBY28288.1| sialic acid utilization regulator, RpiR family [Yersinia
           enterocolitica subsp. palearctica Y11]
          Length = 280

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 85/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     ++AEK    +L ++L      +   A++ +++ + RV++TG+G S
Sbjct: 85  NQILSTDSLKTVGEKLLAEKAA--ALRATLDINSEQRLTEALDMLRSAR-RVILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDSRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QDLESAQD 267


>gi|296241835|ref|YP_003649322.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
 gi|296094419|gb|ADG90370.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
          Length = 141

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 2/114 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                         +   P+ +    + E     V VVD   +L GI+TE D+       
Sbjct: 12  VRATDVMSTPPITAEETMPIEEVAKKMFENNVSSVMVVDSTGRLVGIVTEKDVVGAVAIG 71

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + L V   M +NP  +  DT L   ++ +R+ NI  L VVD   K IG+V 
Sbjct: 72  KIGSNLPVARFMKENPITVTPDTPLDEVLEKMRRFNIRHLPVVDKDGKPIGMVS 125



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             DVM   P    E   +    + + ++N+S +MVVD   + +GIV   D++  
Sbjct: 14  ATDVMSTPPITAEETMPIEEVAKKMFENNVSSVMVVDSTGRLVGIVTEKDVVGA 67



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 21/57 (36%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            +G +           ++   V    PL + +  +       + VVD+  K  G+++
Sbjct: 69  AIGKIGSNLPVARFMKENPITVTPDTPLDEVLEKMRRFNIRHLPVVDKDGKPIGMVS 125


>gi|148378202|ref|YP_001252743.1| CBS domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153930979|ref|YP_001382603.1| CBS domain-containing protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153936233|ref|YP_001386155.1| CBS domain-containing protein [Clostridium botulinum A str. Hall]
 gi|153940514|ref|YP_001389562.1| CBS domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|168177532|ref|ZP_02612196.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|170756627|ref|YP_001779830.1| CBS domain-containing protein [Clostridium botulinum B1 str. Okra]
 gi|226947420|ref|YP_002802511.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|148287686|emb|CAL81751.1| conserved hypothetical membrane [Clostridium botulinum A str. ATCC
           3502]
 gi|152927023|gb|ABS32523.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
 gi|152932147|gb|ABS37646.1| CBS domain protein [Clostridium botulinum A str. Hall]
 gi|152936410|gb|ABS41908.1| CBS domain protein [Clostridium botulinum F str. Langeland]
 gi|169121839|gb|ACA45675.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
 gi|182670387|gb|EDT82361.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|226844378|gb|ACO87044.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|295317659|gb|ADF98036.1| CBS domain protein [Clostridium botulinum F str. 230613]
          Length = 138

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD-LNTL 283
              ++  V     +  A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N +
Sbjct: 7   MTQNVATVNRNDSVEKAAQLMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNI 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V D+M  NP V  +D  +  A +++ +  I  L V D+    +GIV   D+
Sbjct: 66  KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDNQN-IVGIVSLGDI 116



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V DVM +N   +  +  +  A QL+ +HN+  + + D+  K +G++   D+
Sbjct: 1   MKVMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDN-NKVVGVITDRDI 52


>gi|302869869|ref|YP_003838506.1| inosine-5'-monophosphate dehydrogenase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315501331|ref|YP_004080218.1| inosine-5'-monophosphate dehydrogenase [Micromonospora sp. L5]
 gi|302572728|gb|ADL48930.1| inosine-5'-monophosphate dehydrogenase [Micromonospora aurantiaca
           ATCC 27029]
 gi|315407950|gb|ADU06067.1| inosine-5'-monophosphate dehydrogenase [Micromonospora sp. L5]
          Length = 520

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    +    +    V  S   +  
Sbjct: 69  TVPLLSSAMDTVTEARMAIAMARQGGIG-----VLHRNLSVEDQALQVDLVKRSESGMIT 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +   +    R   V VVD   +L GI+T  D+            V ++
Sbjct: 124 NPVTASPDDTLREVDALCGRYRISGVPVVDGQGQLVGIVTNRDMRFVSDP---ATPVREI 180

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P +          A+ LLRQH I  L +VD   K  G++   D  +
Sbjct: 181 MTRTPLITAPVGVSKDDALGLLRQHKIEKLPIVDAGGKLRGLITVKDFTK 230


>gi|163840509|ref|YP_001624914.1| inosine-5'-monophosphate dehydrogenase [Renibacterium salmoninarum
           ATCC 33209]
 gi|162953985|gb|ABY23500.1| inosine-5'-monophosphate dehydrogenase [Renibacterium salmoninarum
           ATCC 33209]
          Length = 505

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/209 (21%), Positives = 70/209 (33%), Gaps = 19/209 (9%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-- 195
           LI +T ++  ++  H D++                  P  SA M       +AIA+    
Sbjct: 13  LIGLTYDDVLLLPGHTDVIPSEADTSSRLSKRITVETPLLSAAMDTVTESRMAIAMARQG 72

Query: 196 -----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
                 RN S +D        +   +            +   +     L +   + +  R
Sbjct: 73  GLGVVHRNLSIDD--------QAEQVDRVKRSESGMITNPVTIGPEATLAELDELCARYR 124

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLL 309
              + VVD   KL GI+T  D       D  T  V +VM K P            A  LL
Sbjct: 125 VSGLPVVDTAGKLLGIVTNRDTRFVLEPDFPTRLVHEVMTKMPLITGKVGISREDASDLL 184

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++ I  L +VDD     G++   D  + 
Sbjct: 185 AKNKIEKLPLVDDAGHLRGLITVKDFTKA 213


>gi|238788218|ref|ZP_04632013.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           frederiksenii ATCC 33641]
 gi|238723805|gb|EEQ15450.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           frederiksenii ATCC 33641]
          Length = 280

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 84/188 (44%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK    +L ++L      +   A+E +K  + RV++TG+G S
Sbjct: 85  NQILSTDSLKIVGEKLLSEKSA--ALRATLDINSEQRLAQALEMLKGAQ-RVILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDTRDLLLAISFSGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPVIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QNLESAQD 267


>gi|197264450|ref|ZP_03164524.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|200387417|ref|ZP_03214029.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
 gi|197242705|gb|EDY25325.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA23]
 gi|199604515|gb|EDZ03060.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Virchow str. SL491]
          Length = 282

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATHCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|83312880|ref|YP_423144.1| inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum
           AMB-1]
 gi|82947721|dbj|BAE52585.1| Inosine-5'-monophosphate dehydrogenase [Magnetospirillum magneticum
           AMB-1]
          Length = 486

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 14/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M       LAIAL +          V+H    +         V      + + 
Sbjct: 40  IPLLSAAMDTVTESRLAIALAQDGGIG-----VIHKNLDIDAQAAEVRKVKKFESGMVVN 94

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +     L DA+ ++S+ +   + VV+ G  KL GI+T  D+      +     V ++
Sbjct: 95  PLTIHPDQTLADALRLMSDYKISGIPVVERGSGKLVGILTNRDVRFA---NDAAQPVYEL 151

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+    + E      A +LL QH I  L+VVD   + IG+V   D+ + 
Sbjct: 152 MTKDKLVTVREGVDKEEAKRLLHQHRIEKLLVVDADYRCIGLVTVKDMEKA 202


>gi|116753635|ref|YP_842753.1| CBS domain-containing protein [Methanosaeta thermophila PT]
 gi|116665086|gb|ABK14113.1| CBS domain containing protein [Methanosaeta thermophila PT]
          Length = 370

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               + +V     L + + ++  EK  G   +V++   L GI+T  D+ R       T  
Sbjct: 251 MSKDVRVVPPEMTLAELMRLMFYEKHRGYPVMVNDE--LVGIVTITDLQRVPEHLRETTR 308

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM +N  VI  D   T A++++    I  L V+ +  + +GI+   DLLR 
Sbjct: 309 VGDVMTRNIYVIGPDDEATAAIKIMGDKKIRRLPVI-EDGRLVGIISREDLLRA 361



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 10/82 (12%)

Query: 263 LKGII-----TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNIS 315
           + GI      +E D        L  + V  +M K+ +V+  +  L   M+L+   +H   
Sbjct: 220 IIGIFLYIAASEEDRSTTIEDSLRGIKVRHIMSKDVRVVPPEMTLAELMRLMFYEKHRGY 279

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            +MV D+    +GIV   DL R
Sbjct: 280 PVMVNDE---LVGIVTITDLQR 298



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              +I ++        AI I+ +K+   + V+ E  +L GII+  D+ R   
Sbjct: 313 MTRNIYVIGPDDEATAAIKIMGDKKIRRLPVI-EDGRLVGIISREDLLRAIE 363


>gi|283850457|ref|ZP_06367745.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283574028|gb|EFC22000.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 218

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     +I A  I+ EK+   + VVD   +L GI++E D+             
Sbjct: 7   MSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDLKAASPSSATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ L ++ +M +NP  I     +  A  ++R      L V+D+  K +GI+   
Sbjct: 67  YEMTYLLSELKIKGLMTRNPVSIRRSDTVERAALIMRDRKFGSLPVIDEAGKVVGIITDT 126

Query: 334 DLLRF 338
           D+ R 
Sbjct: 127 DIFRL 131



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  +   + ED  +  A +++R+  I  L VVD   + +GIV   DL
Sbjct: 3   VGDWMSTDVATVTEDVSMIKAGRIMREKKIRRLPVVDRDGRLVGIVSERDL 53



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   ++    +  A  I+ +++FG + V+DE  K+ GIIT+ DIFR F
Sbjct: 82  MTRNPVSIRRSDTVERAALIMRDRKFGSLPVIDEAGKVVGIITDTDIFRLF 132


>gi|83591584|ref|YP_425336.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum rubrum ATCC
           11170]
 gi|83574498|gb|ABC21049.1| inosine-5'-monophosphate dehydrogenase [Rhodospirillum rubrum ATCC
           11170]
          Length = 487

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  S+ M       +AI + +S         V+H    +         V      + + 
Sbjct: 40  IPLISSAMDTVTESQMAILMAQSGGIG-----VIHKNMTIAAQAEEVRKVKRFESGMVVN 94

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +     L  A+ +++  +   + V + G  KL GI+T  D+      +     V D 
Sbjct: 95  PVTINPDASLSTALDLMAHHKISGIPVTENGSGKLVGILTNRDVRFA---ENTAKPVSDF 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N   + E      A +LL  + I  L+VVD+  + IG++   D+ + 
Sbjct: 152 MTRDNLITVGEGVSQGEARRLLHTNRIEKLIVVDESYRCIGLITVKDMEKA 202


>gi|68479125|ref|XP_716368.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
 gi|68479256|ref|XP_716307.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
 gi|46437973|gb|EAK97311.1| hypothetical protein CaO19.5238 [Candida albicans SC5314]
 gi|46438035|gb|EAK97372.1| hypothetical protein CaO19.12702 [Candida albicans SC5314]
          Length = 605

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                 + K    + +   +++ +R  CV VV+E  +L GI T  D+  R     LN   
Sbjct: 53  KPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQ 112

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++ +M KNP           A+ L+ +     L V+D+  + +G++  
Sbjct: 113 VTIDTIMTKNPICANAADPAGDALNLMVERGFRHLPVLDEKSQIVGVLDI 162



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K         D + +      V +   + +A  ++ E R   V V D  +++ GI T  D
Sbjct: 211 KNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKD 270

Query: 272 -IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            + R     L+    SV  VM   P V      +  A++ +   +   L VV +    IG
Sbjct: 271 VVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKMFDGHYLNLPVVANEGDIIG 330

Query: 329 IV 330
           +V
Sbjct: 331 VV 332



 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 28/184 (15%), Positives = 60/184 (32%), Gaps = 51/184 (27%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L    V    +M             P  DA+ ++ E+ F  + V+D
Sbjct: 94  FTAKDVAFRIVGSGLNATQVTIDTIMTKNPICA--NAADPAGDALNLMVERGFRHLPVLD 151

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL----------------------------------- 283
           E  ++ G++   DI +++ + +  L                                   
Sbjct: 152 EKSQIVGVL---DITKSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVGEQPHHVFQYFE 208

Query: 284 ---------SVEDV--MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    ++ED       P  +     +  A  L++++  + ++V D  ++  GI   
Sbjct: 209 TLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTS 268

Query: 333 LDLL 336
            D++
Sbjct: 269 KDVV 272


>gi|317126516|ref|YP_004100628.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Intrasporangium calvum DSM 43043]
 gi|315590604|gb|ADU49901.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Intrasporangium calvum DSM
           43043]
          Length = 620

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMIKNP 293
              + +A  +++ ++   + VVD G++L GI+T+ D+  R     L T   V  +M  +P
Sbjct: 169 ETTIREAAELMAREQVSSLLVVD-GERLTGIVTDRDLRTRVLAAGLETTRPVSAIMTPDP 227

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                D L    +  +   NI  + VV +  + +G++   DL+R 
Sbjct: 228 VTSSPDDLAMELVLQMTSRNIHHMPVV-EGDRPLGMLTSTDLMRL 271



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL- 335
           H  +    + D++ + P     +T +  A +L+ +  +S L+VVD  ++  GIV   DL 
Sbjct: 147 HSAILQTRLRDLLRRAPITTTGETTIREAAELMAREQVSSLLVVD-GERLTGIVTDRDLR 205

Query: 336 ---LRFGI 340
              L  G+
Sbjct: 206 TRVLAAGL 213


>gi|116671425|ref|YP_832358.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter sp. FB24]
 gi|116611534|gb|ABK04258.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter sp. FB24]
          Length = 503

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 46/205 (22%), Positives = 68/205 (33%), Gaps = 13/205 (6%)

Query: 142 IAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +T ++  ++  H D++                  P  SA M       +AIA+     
Sbjct: 12  IGLTYDDVLLLPGHTDVIPSEADTSSRISKRITVQTPLLSAAMDTVTESRMAIAMARQGG 71

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCV 254
                  V+H    +         V  S   +            L +   I S  R   +
Sbjct: 72  LG-----VVHRNLSIQDQADQVDRVKRSESGMITNPLTIGPEATLAELDEICSHYRVSGL 126

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI-LEDTLLTVAMQLLRQHN 313
            VVDEG +L GI+T  D       D     V DVM K P V          A   L  + 
Sbjct: 127 PVVDEGMRLLGIVTNRDTRFVPEADFPIRLVSDVMTKMPLVTGHVGISREEASHKLATNK 186

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I  L +VDD  +  G++   D  + 
Sbjct: 187 IEKLPLVDDQGRLKGLITTKDFTKA 211


>gi|238878382|gb|EEQ42020.1| conserved hypothetical protein [Candida albicans WO-1]
          Length = 605

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                 + K    + +   +++ +R  CV VV+E  +L GI T  D+  R     LN   
Sbjct: 53  KPGEPIICKPTATVYEVAQLMTARRENCVLVVNEIGELLGIFTAKDVAFRIVGSGLNATQ 112

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +++ +M KNP           A+ L+ +     L V+D+  + +G++  
Sbjct: 113 VTIDTIMTKNPICANAADPAGDALNLMVERGFRHLPVLDEKSQIVGVLDI 162



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 3/122 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K         D + +      V +   + +A  ++ E R   V V D  +++ GI T  D
Sbjct: 211 KNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTSKD 270

Query: 272 -IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            + R     L+    SV  VM   P V      +  A++ +   +   L VV +    IG
Sbjct: 271 VVLRVIAAGLDPKKCSVVRVMTPQPDVAPIGLPVQDALRKMFDGHYLNLPVVANEGDIIG 330

Query: 329 IV 330
           +V
Sbjct: 331 VV 332



 Score = 43.0 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 62/184 (33%), Gaps = 51/184 (27%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D      G  L    V    +M             P  DA+ ++ E+ F  + V+D
Sbjct: 94  FTAKDVAFRIVGSGLNATQVTIDTIMTKNPICA--NAADPAGDALNLMVERGFRHLPVLD 151

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL----------------------------------- 283
           E  ++ G++   DI +++ + +  L                                   
Sbjct: 152 EKSQIVGVL---DITKSYAQQMEKLERMHSSSKKLHEALDSVHNEIGVGEQPHHVFQYFE 208

Query: 284 ---------SVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    ++ED +  N  P  +     +  A  L++++  + ++V D  ++  GI   
Sbjct: 209 TLKNKMNGPTLEDALDANTVPTYVNVKASVHEATMLMKENRTTAVLVKDTNEQVAGIFTS 268

Query: 333 LDLL 336
            D++
Sbjct: 269 KDVV 272


>gi|254473502|ref|ZP_05086899.1| inosine-5'-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
 gi|211957618|gb|EEA92821.1| inosine-5'-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
          Length = 500

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 42/198 (21%), Positives = 75/198 (37%), Gaps = 20/198 (10%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           +      + L        H   P  S+ M       LAIA+ ++         ++H    
Sbjct: 26  SEIMPAQVDLHSRISRNLHLHLPILSSAMDTVTEARLAIAMAQAGGLG-----IIHKNMP 80

Query: 213 LGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQK------ 262
           L         V      + +          L DA+ ++   +   V VV+ G +      
Sbjct: 81  LERQAEEVRQVKKFESGMVVNPLVIGPDATLEDALNLMEAHKISGVPVVENGGRGGTSTG 140

Query: 263 -LKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            L GI+T  D+   F  +   L V ++M + N   + ++     A +LL QH I  L+VV
Sbjct: 141 RLVGILTNRDVR--FASNPEQL-VCELMTRDNLVTVRDNVRQDEAKRLLHQHRIEKLLVV 197

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D+ Q  +G++   D+ + 
Sbjct: 198 DENQCCVGLITVKDMEKA 215


>gi|168182191|ref|ZP_02616855.1| CBS domain protein [Clostridium botulinum Bf]
 gi|170761474|ref|YP_001785527.1| CBS domain-containing protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|237793518|ref|YP_002861070.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
 gi|169408463|gb|ACA56874.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
 gi|182674627|gb|EDT86588.1| CBS domain protein [Clostridium botulinum Bf]
 gi|229262990|gb|ACQ54023.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 138

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD-LNTL 283
              ++  V     +  A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N +
Sbjct: 7   MTQNVATVNRNDSVEKAAELMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNI 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V D+M  NP V  +D  +  A +++ +  I  L V D+    +GIV   D+
Sbjct: 66  KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDNQN-IVGIVSLGDI 116



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V DVM +N   +  +  +  A +L+ +HN+  + + D+  K +G++   D+
Sbjct: 1   MKVMDVMTQNVATVNRNDSVEKAAELMSEHNVGSIPICDN-NKVVGVITDRDI 52


>gi|118589175|ref|ZP_01546582.1| inositol-5-monophosphate dehydrogenase [Stappia aggregata IAM
           12614]
 gi|118438504|gb|EAV45138.1| inositol-5-monophosphate dehydrogenase [Stappia aggregata IAM
           12614]
          Length = 500

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 14/175 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++        +      +                  PL
Sbjct: 46  NIPIISSAMDTVTEGRLAIAMAQAGGIG--VIHRNLSLDQQAEEVRMVKKFESGMVVNPL 103

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLS 284
           V      L DA+ ++       V VV  G        KL GI+T  D+    + D     
Sbjct: 104 VIGPDATLQDALDLMKRYGISGVPVVQNGGSGGQTTGKLVGILTNRDVRFASNPD---QK 160

Query: 285 VEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++M K+    + E+     A +LL Q+ I  L+VVDD +  IG++   D+ + 
Sbjct: 161 IHELMTKDDLVTVNENVSQDDAKRLLHQNRIEKLLVVDDNRNCIGLITVKDMEKA 215


>gi|84489485|ref|YP_447717.1| MetX [Methanosphaera stadtmanae DSM 3091]
 gi|84372804|gb|ABC57074.1| MetX [Methanosphaera stadtmanae DSM 3091]
          Length = 490

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + +A  ++       + +VD+G+++ GIIT  D+ +    D N  S++D+M KN   
Sbjct: 387 TADIKEAAELMMNCNKTHIPIVDDGKEIVGIITAWDLSKAIATDAN--SIDDIMTKNVLT 444

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             E   L   ++ +++HNIS L V+D   K IG + 
Sbjct: 445 CTEYDSLHKVIRKMKEHNISGLPVIDKNHKVIGSIT 480



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 33/73 (45%)

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +I  G +       L+   V+DVM      +     +  A +L+   N + + +VDD ++
Sbjct: 354 LIENGQMNYIISNFLSKARVKDVMSHTTLTLDYTADIKEAAELMMNCNKTHIPIVDDGKE 413

Query: 326 AIGIVHFLDLLRF 338
            +GI+   DL + 
Sbjct: 414 IVGIITAWDLSKA 426


>gi|302536318|ref|ZP_07288660.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
 gi|302445213|gb|EFL17029.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
          Length = 503

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 66/189 (34%), Gaps = 13/189 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A   +              P  SA M       +AIA+            VLH    + 
Sbjct: 33  MAPDEIDTSSLISRNVRVNVPLLSAAMDKVTESRMAIAMARQGGVG-----VLHRNLSIA 87

Query: 215 TLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S          V     L +A  + ++ R   V V D   KL GI+T  
Sbjct: 88  DQANQVDLVKRSESGMVTDPITVHPDATLREADELCAKFRISGVPVTDPAGKLLGIVTNR 147

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D  +  V +VM   P V  +       AM+LLR+H I  L +VD+     G+
Sbjct: 148 DM--AFESD-RSRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDEAGILKGL 204

Query: 330 VHFLDLLRF 338
           +   D ++ 
Sbjct: 205 ITVKDFVKA 213


>gi|14590227|ref|NP_142293.1| inositol-5-monophosphate dehydrogenase [Pyrococcus horikoshii OT3]
 gi|6647544|sp|O58045|IMDH_PYRHO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|109157383|pdb|2CU0|A Chain A, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase From Pyrococcus Horikoshii Ot3
 gi|109157384|pdb|2CU0|B Chain B, Crystal Structure Of Inosine-5'-Monophosphate
           Dehydrogenase From Pyrococcus Horikoshii Ot3
 gi|3256697|dbj|BAA29380.1| 486aa long hypothetical inosine-5'-monophosphate dehydrogenase
           [Pyrococcus horikoshii OT3]
          Length = 486

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 68/168 (40%), Gaps = 15/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +A+A+            V+H    +         V  +      
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMGIEEQVEQVKRVKRAERLIVE 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  +     +  A+ ++ +     + VV E +K+ GIIT+ DI     K      V+++
Sbjct: 102 DVITIAPDETVDFALFLMEKHGIDGLPVV-EDEKVVGIITKKDIAAREGKL-----VKEL 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K    + E   +  A++++ ++ I  L VVD+  K +G++   DL+
Sbjct: 156 MTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLV 203


>gi|301063589|ref|ZP_07204106.1| inosine-5'-monophosphate dehydrogenase [delta proteobacterium
           NaphS2]
 gi|300442321|gb|EFK06569.1| inosine-5'-monophosphate dehydrogenase [delta proteobacterium
           NaphS2]
          Length = 487

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 65/156 (41%), Gaps = 8/156 (5%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
              A+ +A      F   +  +     ++  +    S ++        ++    + + + 
Sbjct: 56  AETAITMARHGGIGFIHKNMSIERQALEVQKVKKSESGMI---VDPITIEPDRKIHEVLE 112

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLT 303
           I+ + +   V VV EG+ L GIIT  D+   F  +L+  +V  VM K N         L 
Sbjct: 113 IMEQYKISGVPVV-EGESLVGIITNRDLR--FETNLDH-TVGSVMTKENLATAKAGITLE 168

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +  +L +  I  L+VVDD  K +G++   D+ +  
Sbjct: 169 DSKAILHKRRIEKLLVVDDNGKLVGLITIKDIEKIK 204


>gi|312905156|ref|ZP_07764277.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
 gi|310631546|gb|EFQ14829.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
          Length = 282

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ +K  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLKKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|217967326|ref|YP_002352832.1| putative signal transduction protein with CBS domains [Dictyoglomus
           turgidum DSM 6724]
 gi|217336425|gb|ACK42218.1| putative signal transduction protein with CBS domains [Dictyoglomus
           turgidum DSM 6724]
          Length = 214

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 14/127 (11%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------- 274
           M    +   V     +++A  I+ + +   + V+ E  KL GI+TE D+           
Sbjct: 5   MRMTKNPISVSPETSILEAWKIMQDSQVRRLLVM-EKGKLVGIVTERDLRSVSPSQATSL 63

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +  L  L V+D M  NP  +  D  +  A  ++R + IS L V+++ +  +GI+ 
Sbjct: 64  SIFEINYLLEKLKVKDAMTPNPITVDADAPIEEAALIMRNNKISALPVIENDE-VVGIIT 122

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 123 ESDIFRA 129



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +   V    P+ +A  I+   +   + V+ E  ++ GIITE DIFR F + L  
Sbjct: 81  MTPNPITVDADAPIEEAALIMRNNKISALPVI-ENDEVVGIITESDIFRAFIEMLGN 136


>gi|145596348|ref|YP_001160645.1| inosine-5'-monophosphate dehydrogenase [Salinispora tropica
           CNB-440]
 gi|145305685|gb|ABP56267.1| inosine-5'-monophosphate dehydrogenase [Salinispora tropica
           CNB-440]
          Length = 520

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    +    +    V  S   +  
Sbjct: 69  NIPLLSSAMDTVTEGRMAIAMARQGGIG-----VLHRNLSVEDQALQVDLVKRSESGMIT 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L D  T+  + R   V VVD   +L GI+T  D+            V ++
Sbjct: 124 NPVTAGPDDTLQDVDTLCGQYRISGVPVVDGDGQLVGIVTNRDMRFVSDP---ATPVREI 180

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P V          A+ LL+QH +  L +VD   K  G++   D  +
Sbjct: 181 MTRTPLVTAPVGVSKEDALGLLQQHKVEKLPIVDGAGKLRGLITVKDFTK 230



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 230 IPLVKIGCPL-IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              V++  PL   A+  ++E R         G    G+     + RN   +   L V+ V
Sbjct: 63  TRTVELNIPLLSSAMDTVTEGRMAIAMARQGG---IGV-----LHRNLSVEDQALQVDLV 114

Query: 289 ------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 MI NP     D  L     L  Q+ IS + VVD   + +GIV   D+
Sbjct: 115 KRSESGMITNPVTAGPDDTLQDVDTLCGQYRISGVPVVDGDGQLVGIVTNRDM 167


>gi|82702327|ref|YP_411893.1| CBS [Nitrosospira multiformis ATCC 25196]
 gi|82410392|gb|ABB74501.1| CBS protein [Nitrosospira multiformis ATCC 25196]
          Length = 139

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     + +A   + +  FG + V DE  +L G+IT+ DI  R   +    + 
Sbjct: 8   MSSDVQTISPDATIEEAAQEMRDGDFGLLPVGDEE-QLLGVITDRDIAIRAVAEGRGPST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V ++M +      ED  +  A +++  + I  L VV+  Q+ +GIV   D
Sbjct: 67  PVSEIMSEGVIWAHEDDSIEEAAEIMSDNQIRRLPVVNAEQRLVGIVSLGD 117



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +VM  + + I  D  +  A Q +R  +  +L V D+ Q  +G++   D+
Sbjct: 2   QKISEVMSSDVQTISPDATIEEAAQEMRDGDFGLLPVGDEEQ-LLGVITDRDI 53


>gi|296532012|ref|ZP_06894792.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
 gi|296267665|gb|EFH13510.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957]
          Length = 251

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 53/151 (35%), Gaps = 26/151 (17%)

Query: 213 LGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                  A  V        L V    PL     + +E+    V VVDE  +L G++TEGD
Sbjct: 15  WRQNKEDAMQVQDLMTRTVLTVPPTTPLATLAALFAERGVSGVPVVDEAGRLLGLVTEGD 74

Query: 272 IFRNFHK------------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           + R                             ++    +DVM         +  +  A  
Sbjct: 75  MLRRLAAPAERPRPWYQRLLASAPRQAEEFARIHGRCAQDVMSTGLVTAPPEMPVDEAAA 134

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LL +H I  L V+ +  + +GI+   DL+R 
Sbjct: 135 LLEKHRIRRLPVLRE-GRLVGILSRADLMRA 164



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 11/76 (14%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             +F  +H     G               +       P+ +A  +L + R   + V+ E 
Sbjct: 101 AEEFARIH-----GRCAQDV-----MSTGLVTAPPEMPVDEAAALLEKHRIRRLPVLRE- 149

Query: 261 QKLKGIITEGDIFRNF 276
            +L GI++  D+ R  
Sbjct: 150 GRLVGILSRADLMRAM 165


>gi|239908873|ref|YP_002955615.1| hypothetical protein DMR_42380 [Desulfovibrio magneticus RS-1]
 gi|239798740|dbj|BAH77729.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 220

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLN 281
           K    ++ A  ++ E  +G + VVD+  +L GIIT+ D+                +  L+
Sbjct: 15  KATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEASPSKATTLDMHELYYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V D+M K    +  D  +  A  L+ +HN+  + VVD     +G++   D+ +
Sbjct: 75  EIKVGDIMTKTVISVSPDDTVEKAAVLMLRHNVGGMPVVDAKGLVVGVITDSDIFK 130



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M K P      T +  A +L++++    L VVDD  + +GI+   D+   
Sbjct: 3   IKDWMSKTPVTAKATTSIMKAAKLMKENGYGRLPVVDDDGRLVGIITDRDVKEA 56



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     +  A  ++     G + VVD    + G+IT+ DIF+  
Sbjct: 89  VSPDDTVEKAAVLMLRHNVGGMPVVDAKGLVVGVITDSDIFKVL 132


>gi|222081282|ref|YP_002540645.1| hypothetical protein Arad_7586 [Agrobacterium radiobacter K84]
 gi|221725961|gb|ACM29050.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 245

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 25/137 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTL 283
                  V     ++DA  I+ ++R   + VVD    L GI++EGD  R    H + N  
Sbjct: 7   MNAPAITVSPETSVVDAARIMLDRRVSGLPVVDASGNLVGIVSEGDFLRRGELHTERNRF 66

Query: 284 ----------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                                 S+E+VM      I  +  L  A+ L+ +H I  L VV 
Sbjct: 67  WLLDFLSSPGKLADEYVLSHGRSIEEVMTSEVVTIAPNAPLIEAVDLMEKHGIKRLPVV- 125

Query: 322 DCQKAIGIVHFLDLLRF 338
              K IGIV   DLL+ 
Sbjct: 126 VKGKVIGIVCRSDLLQA 142



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++ VM      +  +T +  A +++    +S L VVD     +GIV   D LR G
Sbjct: 3   IQAVMNAPAITVSPETSVVDAARIMLDRRVSGLPVVDASGNLVGIVSEGDFLRRG 57



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 9/147 (6%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA-IALLESRN-FS 200
           AIT   ++ V   A I+L               + + +  ++ GD L    L   RN F 
Sbjct: 11  AITVSPETSVVDAARIMLDRRVSGLPVVD---ASGNLVGIVSEGDFLRRGELHTERNRFW 67

Query: 201 ENDFYVLHPGGKLGTLF--VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
             DF +  PG            S        +  +    PLI+A+ ++ +     + VV 
Sbjct: 68  LLDF-LSSPGKLADEYVLSHGRSIEEVMTSEVVTIAPNAPLIEAVDLMEKHGIKRLPVVV 126

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +  K+ GI+   D+ +   K L   +V
Sbjct: 127 K-GKVIGIVCRSDLLQALAKMLPKQTV 152


>gi|188533148|ref|YP_001906945.1| putative DNA-binding transcriptional regulator [Erwinia
           tasmaniensis Et1/99]
 gi|188028190|emb|CAO96048.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
          Length = 279

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 78/188 (41%), Gaps = 5/188 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K      + ++ +  ++     + AEK   S+L ++L           +  ++  + R+V
Sbjct: 77  KEAVTVHNPILSDDALKVVGEKLFAEKT--SALRATLDINSEEMLLETLRLLRQAR-RIV 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG +    +  L   G  +       A    +  +   D+++ +S++G   E+ 
Sbjct: 134 LIGVGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALNTGDVLLAISYTGERREIN 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
                ARR    ++A T    + +   A+  L    E ++     A  +S   QLA+ D 
Sbjct: 194 LAAQEARRIGATVLAFTGFTPNTLQQSANYCLYTVAEEQTTR--SAAISSTTAQLALTDL 251

Query: 189 LAIALLES 196
           L +AL++ 
Sbjct: 252 LFMALIQH 259


>gi|83766852|dbj|BAE56992.1| unnamed protein product [Aspergillus oryzae]
          Length = 287

 Score = 93.0 bits (230), Expect = 6e-17,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDV 288
            +K    + +A  +++ KR  CV V D+  ++ GI T  D+        +    ++V ++
Sbjct: 36  QIKPNMTIAEAAQLMAAKREDCVLVTDDDDRIAGIFTAKDLAFRVVGAGQKARDITVAEI 95

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           M KNP     DT  T A+ L+ +     L V+D+ Q   G++  
Sbjct: 96  MTKNPLCARTDTSATDALDLMVRKGFRHLPVMDENQDISGVLDI 139



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 4/85 (4%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + DA  ++ E     + V D    + GI T  DI  R     L+  T SV
Sbjct: 203 PPVTVSVRTSVKDAAAMMKEHHTTALLVQD-QGSITGIFTSKDIVLRVIAPGLDPSTCSV 261

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLR 310
             VM  +P     D  +  A++ + 
Sbjct: 262 VRVMTPHPDFAPADMSIQAALRKMH 286



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 28/182 (15%), Positives = 59/182 (32%), Gaps = 50/182 (27%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D       G            + + + +   +      DA+ ++  K F  + V+D
Sbjct: 71  FTAKDLA-FRVVGAGQKARDITVAEIMTKNPLC-ARTDTSATDALDLMVRKGFRHLPVMD 128

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL------------SVEDVMIK--------------- 291
           E Q + G++   DI + F+  +  L            ++E V  +               
Sbjct: 129 ENQDISGVL---DITKCFYDAMEKLERAYSSSRKLYDALEGVQTELGSSQPQQIIQYVEA 185

Query: 292 -----------------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                             P  +   T +  A  ++++H+ + L+V D      GI    D
Sbjct: 186 LRSKMSGPTLETVLDGLPPVTVSVRTSVKDAAAMMKEHHTTALLVQD-QGSITGIFTSKD 244

Query: 335 LL 336
           ++
Sbjct: 245 IV 246


>gi|322804467|emb|CBZ02017.1| inosine-5'-monophosphate dehydrogenase [Clostridium botulinum
           H04402 065]
          Length = 138

 Score = 93.0 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD-LNTL 283
              ++  V     +  A  ++SE   G + + D   K+ G+IT+ DI  R+  K   N +
Sbjct: 7   MTQNVATVNRNDSVEKAAQLMSEHNVGSIPICD-NNKVVGVITDRDIALRSVAKGSDNNI 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V D+M  NP V  +D  +  A +++ +  I  L V D+    +GIV   D+
Sbjct: 66  KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPVEDNQN-IVGIVSLGDI 116



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + DVM +N   +  +  +  A QL+ +HN+  + + D+  K +G++   D+
Sbjct: 1   MKIMDVMTQNVATVNRNDSVEKAAQLMSEHNVGSIPICDN-NKVVGVITDRDI 52


>gi|291457348|ref|ZP_06596738.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium breve DSM
           20213]
 gi|291381183|gb|EFE88701.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium breve DSM
           20213]
          Length = 517

 Score = 93.0 bits (230), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/170 (26%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+DV
Sbjct: 113 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKDNKLVGIITNRDMRFIASEDYDTLKVKDV 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD      G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDAEGHLTGLITVKDFVK 222


>gi|294789452|ref|ZP_06754689.1| transcriptional regulator, RpiR family [Simonsiella muelleri ATCC
           29453]
 gi|294482665|gb|EFG30355.1| transcriptional regulator, RpiR family [Simonsiella muelleri ATCC
           29453]
          Length = 280

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 7/172 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      L     +L          A+  +   + R+   G+G SG +          
Sbjct: 96  KVLGNTAAALLGARRTLNPS---DLERAISLLAHAR-RIEFYGVGNSGIVAQDAQHKFFR 151

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              +++  D+++V+S SGSS E+   +  A+     +I IT  +
Sbjct: 152 FGISTVAYSDTHIQLMAAAVLSPQDVLVVISNSGSSIEILDAVSIAKENGAQVIVIT-RH 210

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            S +A   D VLT+  + +S  +   P  S ++QLA+ D LAI L      +
Sbjct: 211 DSPLAQLGDCVLTVAVQEDSSRY--TPMVSRLLQLAVVDILAIGLALRLGET 260


>gi|261402855|ref|YP_003247079.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369848|gb|ACX72597.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 158

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 58/150 (38%), Gaps = 34/150 (22%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
           V         VK    L + I +  EKR     V+++  +L GII+E DI +      +D
Sbjct: 7   VKDVMKKPITVKDNDDLTEVIKLFREKRISGAPVLNDDGELVGIISESDIIKTLTTHDED 66

Query: 280 LN-------------------------------TLSVEDVMIKNPKVILEDTLLTVAMQL 308
           LN                                  V+DVM K+  V   D  +  A +L
Sbjct: 67  LNLILPSPLDLIELPLKTAIKIEEFKEDLKKALKTKVKDVMTKDVVVAKPDMTINDAAKL 126

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +H I  L VVD+  K IGI+   D++  
Sbjct: 127 MVEHKIKRLPVVDEDGKLIGIITRGDIIEA 156



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + + K    + DA  ++ E +   + VVDE  KL GIIT GDI    
Sbjct: 107 MTKDVVVAKPDMTINDAAKLMVEHKIKRLPVVDEDGKLIGIITRGDIIEAL 157


>gi|282901989|ref|ZP_06309887.1| Phosphoesterase, RecJ-like protein [Cylindrospermopsis raciborskii
           CS-505]
 gi|281193076|gb|EFA68075.1| Phosphoesterase, RecJ-like protein [Cylindrospermopsis raciborskii
           CS-505]
          Length = 912

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  IL       ++VV+   KL GII+  D+    H       V
Sbjct: 320 MSSPVRTIRPETTIAQAQRILLRYGHSGLSVVNNQDKLVGIISRRDLDIALHHGFGHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  + K I   T L     L+  +NI  L V+++    +GIV   DLLR
Sbjct: 380 KGYMTTDLKTITPHTELPQIESLMVTYNIGRLPVLENGN-LVGIVTRTDLLR 430



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D+M    + I  +T +  A ++L ++  S L VV++  K +GI+   DL
Sbjct: 316 ARDLMSSPVRTIRPETTIAQAQRILLRYGHSGLSVVNNQDKLVGIISRRDL 366



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L    +++     G + V+ E   L GI+T  D
Sbjct: 369 ALHHGFGHAPVKGYMTTDLKTITPHTELPQIESLMVTYNIGRLPVL-ENGNLVGIVTRTD 427

Query: 272 IFRNFHK 278
           + R  H+
Sbjct: 428 LLRQLHQ 434


>gi|255034048|ref|YP_003084669.1| putative signal transduction protein with CBS domains [Dyadobacter
           fermentans DSM 18053]
 gi|254946804|gb|ACT91504.1| putative signal transduction protein with CBS domains [Dyadobacter
           fermentans DSM 18053]
          Length = 140

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + +A+ +++EK  G V V+ E  +L GI +E D  R      +      + DVM
Sbjct: 12  VTQDNTVFEALELMAEKNIGAVLVL-EDNELIGIFSERDYARKVILQGRASKDTLIRDVM 70

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D  +   MQ++   +I  L V +   + +GI+   D++  
Sbjct: 71  TARVITVETDAKIEECMQIMSDKHIRHLPV-NRDGRLVGIISINDIVSA 118



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G               +  V+    + + + I+S+K    + V +
Sbjct: 45  FSERDYA--RKVILQGRASKDTLIRDVMTARVITVETDAKIEECMQIMSDKHIRHLPV-N 101

Query: 259 EGQKLKGIITEGDIFRNF 276
              +L GII+  DI    
Sbjct: 102 RDGRLVGIISINDIVSAI 119


>gi|148252269|ref|YP_001236854.1| hypothetical protein BBta_0680 [Bradyrhizobium sp. BTAi1]
 gi|146404442|gb|ABQ32948.1| hypothetical protein BBta_0680 [Bradyrhizobium sp. BTAi1]
          Length = 249

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 25/141 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN---- 275
                   S+  V  G P+ +A  I+     G + VVD   +L G++T+GD + R     
Sbjct: 2   RAHQIMTRSVITVTPGTPVAEAARIMLRNHIGGLPVVDAAGRLVGMVTDGDFLRRAELGT 61

Query: 276 ----------------FHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                              D    +  +V D+M +    +  D  L     ++ + +I  
Sbjct: 62  ERKQGRWLDLLVGRGRIGADFVHSHGRTVGDIMSRPAVTVSPDASLAEIAAIMEKRSIKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV   ++ +G+V   D ++
Sbjct: 122 LPVV-SGEQLVGMVTHTDFVQ 141



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M ++   +   T +  A +++ +++I  L VVD   + +G+V   D LR
Sbjct: 1   MRAHQIMTRSVITVTPGTPVAEAARIMLRNHIGGLPVVDAAGRLVGMVTDGDFLR 55


>gi|145591936|ref|YP_001153938.1| signal transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283704|gb|ABP51286.1| putative signal transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 286

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 52/119 (43%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             AS       +    +    + + +    E+RF  + VVDE  K  G++    +     
Sbjct: 158 PRASVKSIMTPNPVTARPEDSVEEYVKYFVERRFRGIPVVDEQTKPVGLLMASKVMEALA 217

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +    V D+M +NP  I ED  L  A++L+    I  L+VVD   + +GIV   D+L
Sbjct: 218 NCILKAKVRDLMARNPPTIHEDEDLHEAVRLMISSGIGRLLVVDSEDRLVGIVTRTDIL 276



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           L   SV+ +M  NP     +  +   ++   +     + VVD+  K +G++
Sbjct: 157 LPRASVKSIMTPNPVTARPEDSVEEYVKYFVERRFRGIPVVDEQTKPVGLL 207



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L    + A        + P +     L +A+ ++     G + VVD   +L GI+T  D
Sbjct: 215 ALANCILKAKVRDLMARNPPTIHEDEDLHEAVRLMISSGIGRLLVVDSEDRLVGIVTRTD 274

Query: 272 IFRNFH 277
           I     
Sbjct: 275 ILSKIA 280


>gi|331003523|ref|ZP_08327020.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330412364|gb|EGG91755.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 484

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 68/181 (37%), Gaps = 14/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +            P  SA M       +AIA+            ++H    +      
Sbjct: 28  IDISTYLTKNIKLNIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +            L DA  ++S+ R   V +  EG+KL GIIT  D+   
Sbjct: 83  VDKVKRSENGVITDPFYLSPEHTLSDANELMSKYRISGVPIT-EGKKLVGIITNRDLK-- 139

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D  T  + + M K +    LE T L  A ++L +  +  L +VD      G++   D
Sbjct: 140 FEEDF-TKKIAECMTKEHLVTALEGTTLDEAKKILARARVEKLPIVDKNGNLKGLITIKD 198

Query: 335 L 335
           +
Sbjct: 199 I 199



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 27/65 (41%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K    F        + + +     G  L +A  IL+  R   + +VD+   LKG+IT  D
Sbjct: 139 KFEEDFTKKIAECMTKEHLVTALEGTTLDEAKKILARARVEKLPIVDKNGNLKGLITIKD 198

Query: 272 IFRNF 276
           I +  
Sbjct: 199 IEKQI 203


>gi|282900781|ref|ZP_06308721.1| Cl- channel, voltage gated [Cylindrospermopsis raciborskii CS-505]
 gi|281194311|gb|EFA69268.1| Cl- channel, voltage gated [Cylindrospermopsis raciborskii CS-505]
          Length = 867

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 4/103 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + +AI   S        VVD   +L GIIT+ DI   +       ++ ++M   P  
Sbjct: 461 QMSIKEAIQAFSRSHHRGFPVVD-QGQLVGIITQSDIKNIYP--FQHTTLREIMTPGPIT 517

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D  LT  + LL +H IS L VV+  QK +GI+   D++R 
Sbjct: 518 VQPDQGLTEVLYLLNRHQISRLPVVEK-QKILGIITRGDIIRA 559



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 33/79 (41%), Gaps = 14/79 (17%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +++   ++GI+T              L  EDVM K  + +     +  A+Q   + +   
Sbjct: 432 IEKNSPIEGILT-------------KLKAEDVMQKRVETLDVQMSIKEAIQAFSRSHHRG 478

Query: 317 LMVVDDCQKAIGIVHFLDL 335
             VVD   + +GI+   D+
Sbjct: 479 FPVVD-QGQLVGIITQSDI 496



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 11/92 (11%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPL----------VKIGCPLIDAITILSEKRFGC 253
           F V+  G  +G +       ++      L          V+    L + + +L+  +   
Sbjct: 479 FPVVDQGQLVGIITQSDIKNIYPFQHTTLREIMTPGPITVQPDQGLTEVLYLLNRHQISR 538

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           + VV E QK+ GIIT GDI R     +N  ++
Sbjct: 539 LPVV-EKQKILGIITRGDIIRAEADSINCKNI 569


>gi|307718688|ref|YP_003874220.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6192]
 gi|306532413|gb|ADN01947.1| inosine-5'-monophosphate dehydrogenase [Spirochaeta thermophila DSM
           6192]
          Length = 481

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 18/181 (9%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLG 214
           +  E         P  SA M       +AIAL       +  RN S          G++ 
Sbjct: 31  VEVELHPRLRLNIPILSAAMDTVTEKEMAIALALEGGLGIIHRNLSPE-----EQAGQVA 85

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +    + ++ S  +   V+ G  + +A  ++ +     + VVD    L GI+T  D+  
Sbjct: 86  AVKRYLNWIIESPIT---VRKGQTVREAKALMQQYNISGLPVVDGEGSLCGILTGRDLR- 141

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F KD   L VE+VM  +P V      +  A +   +H +  L +VD+  K IG+V   D
Sbjct: 142 -FVKD-ERLKVEEVMTPDPVVERGRPTIDQAQEAFDRHKVEKLPLVDEGGKLIGLVTVKD 199

Query: 335 L 335
           +
Sbjct: 200 I 200


>gi|254381603|ref|ZP_04996967.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340512|gb|EDX21478.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 213

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 48/116 (41%), Gaps = 10/116 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------RNFHKDLNT 282
           V       D   +L++     + V+D+  ++ G++++ D+               +   +
Sbjct: 8   VAPDTAFKDVAKLLAQYGVSGLPVLDDEDRVVGVVSQTDVLAHAAPAPHPAEETARPTGS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  DVM      +  +     A +L+ +  I  L VVD+  + +GIV   DLLR 
Sbjct: 68  PTAGDVMSTPAVTVHAEETAADAARLMTRRGIERLPVVDEEDRLVGIVTRRDLLRL 123



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 24/48 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M      +  DT      +LL Q+ +S L V+DD  + +G+V   D+L
Sbjct: 1   MTDEVVSVAPDTAFKDVAKLLAQYGVSGLPVLDDEDRVVGVVSQTDVL 48



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                  V       DA  +++ +    + VVDE  +L GI+T  D+ R F +
Sbjct: 74  MSTPAVTVHAEETAADAARLMTRRGIERLPVVDEEDRLVGIVTRRDLLRLFVR 126


>gi|307710348|ref|ZP_07646789.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK564]
 gi|307618940|gb|EFN98075.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK564]
          Length = 492

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L+ A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLSTAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|300717981|ref|YP_003742784.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
 gi|299063817|emb|CAX60937.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
          Length = 279

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 5/179 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     ++ EK+  S++ ++L           +  I++   R+V+ GIG SG 
Sbjct: 86  ILSDDPLKLVGEKLLTEKQ--SAIRATLDINSEEMLLETLRLIRSA-NRIVLVGIGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  +   DL++ +S++G   E+      A+R 
Sbjct: 143 VAKDFSWKLMKIGINAVAEQDMHALLASVQALNPGDLLLAISYTGERREINLAAQEAQRA 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              ++A T    + +   A   L    E ++     A  +S   QL + D L +AL++ 
Sbjct: 203 GANVLAFTGFTPNTLQQCATHCLYTVAEEQTTR--SAAISSTTAQLTLTDLLFMALVQR 259


>gi|290967864|ref|ZP_06559415.1| inosine-5'-monophosphate dehydrogenase [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290782104|gb|EFD94681.1| inosine-5'-monophosphate dehydrogenase [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   I +
Sbjct: 46  NIPIMSSGMDTVTEAPMAIAIAREGGIG-----VIHKNMSIAAQAREVDKVKRSEHGIII 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  +  KL GIIT  D+   F +D++   + D+
Sbjct: 101 DPIFLNPDNLLADANELMEKYRISGVPITVD-GKLVGIITNRDMR--FEEDMSR-RIGDI 156

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N       T L  A ++LR H I  L +VD      G++   D+ + 
Sbjct: 157 MTAENLVTAPVGTSLAEAKEILRNHRIEKLPLVDKEGNLKGLITIKDIEKA 207


>gi|240102816|ref|YP_002959125.1| inosine 5'-monophosphate dehydrogenase [Thermococcus gammatolerans
           EJ3]
 gi|239910370|gb|ACS33261.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) (guaB) [Thermococcus gammatolerans EJ3]
          Length = 485

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 15/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEQVKKVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  AI ++       + VV E  K+ G+I++ DI     K      V D+
Sbjct: 102 DVISISPDETVDYAIFLMERNDIDGLPVV-EDGKVVGVISKKDIAVKQGKL-----VRDI 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P  + E+     A+ L+ +H I  L VV+   K +GI+   DL +
Sbjct: 156 MTGEPITVPENVTAEEALTLMFEHRIDRLPVVNSEGKLVGIITMSDLAK 204



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 22/50 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  V       +A+T++ E R   + VV+   KL GIIT  D+ + 
Sbjct: 156 MTGEPITVPENVTAEEALTLMFEHRIDRLPVVNSEGKLVGIITMSDLAKR 205


>gi|297588840|ref|ZP_06947481.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
 gi|297577351|gb|EFH96064.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus MN8]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E + L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  +N      +T L  A ++L++H I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLV-KDGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|315194873|gb|EFU25262.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus CGS00]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E + L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  +N      +T L  A ++L++H I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLV-KDGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|269128448|ref|YP_003301818.1| inosine-5'-monophosphate dehydrogenase [Thermomonospora curvata DSM
           43183]
 gi|268313406|gb|ACY99780.1| inosine-5'-monophosphate dehydrogenase [Thermomonospora curvata DSM
           43183]
          Length = 500

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 61/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            +LH    +      A  V  S +    
Sbjct: 47  RIPLVSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIEEQAEQADMVKRSENGMIT 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L D   + S  R   V VVD    L GI+T  D    F  D  T  V +V
Sbjct: 102 KPVTCSPDDTLADVEQLCSRFRISGVPVVDAEGVLVGIVTNRDTR--FESD-PTRPVREV 158

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P +    D     A +LL Q+ I  L ++DD  +  G++   D ++
Sbjct: 159 MTPMPLITAPVDVSKEEAFRLLAQNKIEKLPLIDDAGRLRGLITVKDFVK 208


>gi|120598184|ref|YP_962758.1| inosine 5'-monophosphate dehydrogenase [Shewanella sp. W3-18-1]
 gi|146293742|ref|YP_001184166.1| inosine 5'-monophosphate dehydrogenase [Shewanella putrefaciens
           CN-32]
 gi|120558277|gb|ABM24204.1| inosine-5'-monophosphate dehydrogenase [Shewanella sp. W3-18-1]
 gi|145565432|gb|ABP76367.1| inosine-5'-monophosphate dehydrogenase [Shewanella putrefaciens
           CN-32]
 gi|319427116|gb|ADV55190.1| inosine-5'-monophosphate dehydrogenase [Shewanella putrefaciens
           200]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEKQAEEVRKVKIYEAGVVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +  +  F    VV+E  +L GIIT  D+   F  D +  +VE+VM 
Sbjct: 100 --VTPSTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVEEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  + I  ++VVDD  K  G++   D  + 
Sbjct: 155 PKSRLVTVAEGTKLDEVQKLMHSNRIEKVLVVDDNFKLKGLITVKDFEKA 204


>gi|15923380|ref|NP_370914.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15926091|ref|NP_373624.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus N315]
 gi|49482641|ref|YP_039865.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|49485270|ref|YP_042491.1| putative inosine-5'-monophosphate dehydrogenase [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57652647|ref|YP_185350.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus COL]
 gi|82750101|ref|YP_415842.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus RF122]
 gi|87160055|ref|YP_493102.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|88194172|ref|YP_498963.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|148266875|ref|YP_001245818.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|150392921|ref|YP_001315596.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|151220592|ref|YP_001331414.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156978718|ref|YP_001440977.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|161508661|ref|YP_001574320.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141366|ref|ZP_03565859.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253316509|ref|ZP_04839722.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus str. CF-Marseille]
 gi|253730755|ref|ZP_04864920.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253735136|ref|ZP_04869301.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255005186|ref|ZP_05143787.2| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus Mu50-omega]
 gi|257424534|ref|ZP_05600963.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257427201|ref|ZP_05603603.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257429837|ref|ZP_05606224.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257432540|ref|ZP_05608903.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257435444|ref|ZP_05611495.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M876]
 gi|257794223|ref|ZP_05643202.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9781]
 gi|258413491|ref|ZP_05681766.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9763]
 gi|258421386|ref|ZP_05684313.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9719]
 gi|258424558|ref|ZP_05687435.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9635]
 gi|258436915|ref|ZP_05689255.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9299]
 gi|258444368|ref|ZP_05692702.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8115]
 gi|258444906|ref|ZP_05693227.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus A6300]
 gi|258448111|ref|ZP_05696240.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus A6224]
 gi|258452996|ref|ZP_05700989.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A5948]
 gi|258455944|ref|ZP_05703899.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A5937]
 gi|262048949|ref|ZP_06021829.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus D30]
 gi|262052554|ref|ZP_06024750.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus
           930918-3]
 gi|269202036|ref|YP_003281305.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|282893551|ref|ZP_06301784.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8117]
 gi|282902997|ref|ZP_06310890.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C160]
 gi|282907393|ref|ZP_06315241.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282907736|ref|ZP_06315578.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282912623|ref|ZP_06320419.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282913248|ref|ZP_06321040.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282915733|ref|ZP_06323503.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus D139]
 gi|282918196|ref|ZP_06325937.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282922875|ref|ZP_06330565.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C101]
 gi|282926484|ref|ZP_06334115.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9765]
 gi|282927445|ref|ZP_06335063.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A10102]
 gi|283768116|ref|ZP_06341031.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus H19]
 gi|283959849|ref|ZP_06377290.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|284023424|ref|ZP_06377822.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 132]
 gi|293498298|ref|ZP_06666152.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|293509238|ref|ZP_06667956.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M809]
 gi|293550503|ref|ZP_06673175.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|294850038|ref|ZP_06790776.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9754]
 gi|295405662|ref|ZP_06815472.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8819]
 gi|295426945|ref|ZP_06819584.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296276084|ref|ZP_06858591.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus MR1]
 gi|297209096|ref|ZP_06925495.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297245569|ref|ZP_06929437.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8796]
 gi|300911097|ref|ZP_07128546.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380397|ref|ZP_07363077.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|54037425|sp|P99106|IMDH_STAAN RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|54041390|sp|P65169|IMDH_STAAM RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|56748993|sp|Q6GC82|IMDH_STAAS RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|56749047|sp|Q6GJQ7|IMDH_STAAR RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|81695248|sp|Q5HIQ7|IMDH_STAAC RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|122540207|sp|Q2G0Y7|IMDH_STAA8 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|123487242|sp|Q2FJM6|IMDH_STAA3 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|123548516|sp|Q2YVL6|IMDH_STAAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|13700304|dbj|BAB41602.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus N315]
 gi|14246158|dbj|BAB56552.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|49240770|emb|CAG39432.1| putative inosine-5'-monophosphate dehydrogenase [Staphylococcus
           aureus subsp. aureus MRSA252]
 gi|49243713|emb|CAG42138.1| putative inosine-5'-monophosphate dehydrogenase [Staphylococcus
           aureus subsp. aureus MSSA476]
 gi|57286833|gb|AAW38927.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus COL]
 gi|82655632|emb|CAI80028.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus RF122]
 gi|87126029|gb|ABD20543.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus USA300_FPR3757]
 gi|87201730|gb|ABD29540.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus NCTC 8325]
 gi|147739944|gb|ABQ48242.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945373|gb|ABR51309.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus JH1]
 gi|150373392|dbj|BAF66652.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus str. Newman]
 gi|156720853|dbj|BAF77270.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus Mu3]
 gi|160367470|gb|ABX28441.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|253725599|gb|EES94328.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253726936|gb|EES95665.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257273552|gb|EEV05654.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257276832|gb|EEV08283.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 65-1322]
 gi|257280318|gb|EEV10905.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus 68-397]
 gi|257283419|gb|EEV13551.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus E1410]
 gi|257286040|gb|EEV16156.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M876]
 gi|257788195|gb|EEV26535.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9781]
 gi|257839738|gb|EEV64207.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9763]
 gi|257842810|gb|EEV67232.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9719]
 gi|257845153|gb|EEV69190.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9635]
 gi|257848706|gb|EEV72693.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9299]
 gi|257850627|gb|EEV74575.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8115]
 gi|257856224|gb|EEV79138.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus A6300]
 gi|257858626|gb|EEV81500.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus A6224]
 gi|257859206|gb|EEV82061.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A5948]
 gi|257862156|gb|EEV84929.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A5937]
 gi|259159535|gb|EEW44583.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus
           930918-3]
 gi|259163021|gb|EEW47583.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus D30]
 gi|262074326|gb|ACY10299.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ED98]
 gi|269939967|emb|CBI48340.1| putative inosine-5'-monophosphate dehydrogenase [Staphylococcus
           aureus subsp. aureus TW20]
 gi|282315096|gb|EFB45482.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C101]
 gi|282317893|gb|EFB48261.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C427]
 gi|282320362|gb|EFB50702.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus D139]
 gi|282323348|gb|EFB53667.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M899]
 gi|282324319|gb|EFB54635.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus WBG10049]
 gi|282328641|gb|EFB58912.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus WW2703/97]
 gi|282330292|gb|EFB59813.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus Btn1260]
 gi|282590769|gb|EFB95845.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A10102]
 gi|282592204|gb|EFB97224.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9765]
 gi|282597456|gb|EFC02415.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus C160]
 gi|282764237|gb|EFC04364.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8117]
 gi|283461995|gb|EFC09079.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus H19]
 gi|283469694|emb|CAQ48905.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ST398]
 gi|283789441|gb|EFC28268.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus A017934/97]
 gi|285816112|gb|ADC36599.1| Inosine-5-monophosphate dehydrogenase [Staphylococcus aureus
           04-02981]
 gi|290919550|gb|EFD96626.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M1015]
 gi|291097229|gb|EFE27487.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 58-424]
 gi|291467990|gb|EFF10498.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus M809]
 gi|294823172|gb|EFG39603.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A9754]
 gi|294969737|gb|EFG45756.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8819]
 gi|295129397|gb|EFG59024.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus EMRSA16]
 gi|296886029|gb|EFH24963.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297177555|gb|EFH36806.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           A8796]
 gi|298693726|gb|ADI96948.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ED133]
 gi|300887276|gb|EFK82472.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus TCH70]
 gi|302332127|gb|ADL22320.1| inosine-5'-monophosphate dehydrogenase, GuaB [Staphylococcus aureus
           subsp. aureus JKD6159]
 gi|302750281|gb|ADL64458.1| putative inosine-5'-monophosphate dehydrogenase [Staphylococcus
           aureus subsp. aureus str. JKD6008]
 gi|304341072|gb|EFM06992.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ATCC BAA-39]
 gi|312436495|gb|ADQ75566.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus TCH60]
 gi|312828910|emb|CBX33752.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315130040|gb|EFT86029.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus CGS03]
 gi|315198074|gb|EFU28406.1| IMP dehydrogenase [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139300|gb|EFW31179.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320142850|gb|EFW34646.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|323439288|gb|EGA97013.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus O11]
 gi|323442529|gb|EGB00157.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus O46]
 gi|329313106|gb|AEB87519.1| Inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724199|gb|EGG60712.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329725595|gb|EGG62074.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329732648|gb|EGG68998.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVQLSDKVKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E + L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  +N      +T L  A ++L++H I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLV-KDGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|323465496|gb|ADX77649.1| inosine-5'-monophosphate dehydrogenase [Staphylococcus
           pseudintermedius ED99]
          Length = 488

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMSIERQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD+   +KL GI+T  D+ 
Sbjct: 85  VQKVKRSENGVITDPFFLTPEESVYEAEALMGKYRISGVPIVDDKTSRKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  ++       T L  A ++L+ H I  L +V +     G++  
Sbjct: 145 --FIEDF-SIKISDVMTQEDLVTAPVGTTLQEAEEILQAHKIEKLPLV-EDGVLQGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|148257031|ref|YP_001241616.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
 gi|146409204|gb|ABQ37710.1| hypothetical protein BBta_5760 [Bradyrhizobium sp. BTAi1]
          Length = 242

 Score = 92.7 bits (229), Expect = 7e-17,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  V     +++A  I+ ++    + VVD   KL G+++EGD  R      
Sbjct: 2   RAHQIMTRPVITVTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIRRTEIGT 61

Query: 281 ------------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                   +   V +VM K+P  I ED  L   ++++ ++++  
Sbjct: 62  GRKRGRWLRFILGPGKSAADFVHEHGRKVSEVMTKSPLTITEDAALAEIVEIMEKNHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VV    + +GIV   +LL+ 
Sbjct: 122 LPVV-KGDQVVGIVSRANLLQA 142



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  DT +  A  ++ Q ++S L VVD   K IG+V   D +R
Sbjct: 1   MRAHQIMTRPVITVTPDTSIVEAANIMLQRHVSGLPVVDASGKLIGVVSEGDFIR 55


>gi|52549167|gb|AAU83016.1| conserved hypothetical protein [uncultured archaeon GZfos26B2]
          Length = 496

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  + +   + +A  ++ E +F  + V+ E   L GI+T  DI +   +  +T +V
Sbjct: 381 MSEDVRTISVHAEIKEAAELIIEGKFNHLPVLSEDGALVGIVTSWDISKAVARG-DTGTV 439

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              M         D  + +A++ + +H IS L V+D  +K IG+V   DL
Sbjct: 440 RSAMTGRVVTSSPDEFVEIAVRKMERHKISALPVIDPNRKVIGMVTSGDL 489



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L V D M ++ + I     +  A +L+ +   + L V+ +    +GIV   D+ + 
Sbjct: 374 QLLVRDAMSEDVRTISVHAEIKEAAELIIEGKFNHLPVLSEDGALVGIVTSWDISKA 430



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 8/45 (17%), Positives = 21/45 (46%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                +  A+  +   +   + V+D  +K+ G++T GD+ +   +
Sbjct: 451 SPDEFVEIAVRKMERHKISALPVIDPNRKVIGMVTSGDLNKLLVR 495


>gi|21282095|ref|NP_645183.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus MW2]
 gi|38604919|sp|Q8NY70|IMDH_STAAW RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|21203531|dbj|BAB94231.1| inositol-monophosphate dehydrogenase [Staphylococcus aureus subsp.
           aureus MW2]
          Length = 488

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 71/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVQLSDKAKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMGVEEQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD  E + L GI+T  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVYEAEALMGKYRISGVPIVDNKEDRNLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  +N      +T L  A ++L++H I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKIVDVMTQENLITAPVNTTLEEAEKILQKHKIEKLPLV-KDGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|254302919|ref|ZP_04970277.1| IMP dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
 gi|148323111|gb|EDK88361.1| IMP dehydrogenase [Fusobacterium nucleatum subsp. polymorphum ATCC
           10953]
          Length = 488

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 100 ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 157 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|126179463|ref|YP_001047428.1| hypothetical protein Memar_1517 [Methanoculleus marisnigri JR1]
 gi|125862257|gb|ABN57446.1| protein of unknown function DUF39 [Methanoculleus marisnigri JR1]
          Length = 502

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 2/131 (1%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                  +   +     D+M+       +     +  A   L +     + V+D    L 
Sbjct: 364 AKRSKPMRETAVTPRVRDIMNRQVIS--ITEDEEIRVAAKRLLKDETNHLPVLDGNGTLV 421

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GIIT  D+ +    D     V+D+M +N      D  + VA + L Q+NIS L VVD   
Sbjct: 422 GIITTYDVSKAVVTDGKLRQVKDIMTRNVIKTTPDEPVDVAARKLEQNNISALPVVDATN 481

Query: 325 KAIGIVHFLDL 335
           + +GI+  +DL
Sbjct: 482 RVVGILSAIDL 492



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T  V D+M +    I ED  + VA + L +   + L V+D     +GI+   D+ + 
Sbjct: 376 TPRVRDIMNRQVISITEDEEIRVAAKRLLKDETNHLPVLDGNGTLVGIITTYDVSKA 432


>gi|71006334|ref|XP_757833.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
 gi|46097269|gb|EAK82502.1| hypothetical protein UM01686.1 [Ustilago maydis 521]
          Length = 708

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVM 289
           V     + DA  + + KR  CV VVDE + L GI T  D+  R      D     V  +M
Sbjct: 73  VPQSISVADASQLCAAKRTDCVLVVDEDEHLAGIFTAKDLAFRVVSAGLDARNTPVSAIM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            ++P V  + T  T A+  +       L V ++    +G++  
Sbjct: 133 TRSPMVTRDTTSATEALNTMVTRGFRHLPVCNEDGDVVGLLDI 175



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 50/136 (36%), Gaps = 22/136 (16%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE----------------GQKLKG 265
            ++ S      V +   + +A  ++ E     V V++                   K+ G
Sbjct: 235 TILDSRTLPCCVGVRTTVREAARLMKEHHTTAVCVMESTGSGPGTGQIGGGGAVSGKIAG 294

Query: 266 IITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I T  D+  R     L+  T SV  VM  +P        +  A++ +       L VVD 
Sbjct: 295 IFTSKDVVLRVIAAGLDPKTCSVVRVMTPHPDTAPPSLTIQEALRKMHDGRYLNLPVVDV 354

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G+V   D+L+ 
Sbjct: 355 DSRLVGVV---DVLKL 367



 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 31/85 (36%), Gaps = 5/85 (5%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D         L       S +M       + +      +A+  +  + F  + V +
Sbjct: 107 FTAKDLAFRVVSAGLDARNTPVSAIMTRSPM--VTRDTTSATEALNTMVTRGFRHLPVCN 164

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E   + G++   DI + F++ L  L
Sbjct: 165 EDGDVVGLL---DIAKVFYEALEKL 186


>gi|297625860|ref|YP_003687623.1| inosine-5-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) / GMP reductase) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
 gi|296921625|emb|CBL56179.1| Inosine-5-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) / GMP reductase) [Propionibacterium
           freudenreichii subsp. shermanii CIRM-BIA1]
          Length = 506

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   + +
Sbjct: 51  KTPLLSAAMDTVTESRMAIAMAREGGLG-----IIHRNLSIDDQAHMVDRVKRSEAGMVV 105

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  +        V V+D   KL GIIT  D+   F  D     V ++
Sbjct: 106 EPITIGPEATLAEADELCGNFHISGVPVIDADDKLLGIITNRDMR--FETD-PKRPVREI 162

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P V          A++LL  + I  L +VDD  +  G++   D ++
Sbjct: 163 MTKMPLVTGPVGIKPDDALKLLATNKIEKLPLVDDQGRLKGLITLKDFVK 212


>gi|269796148|ref|YP_003315603.1| inosine-5'-monophosphate dehydrogenase [Sanguibacter keddieii DSM
           10542]
 gi|269098333|gb|ACZ22769.1| inosine-5'-monophosphate dehydrogenase [Sanguibacter keddieii DSM
           10542]
          Length = 507

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            ++H    +         V  S      
Sbjct: 50  SVPLLSAAMDTVTESRMAIAMARQGGIG-----IIHRNLSIEAQAQNVDLVKRSESGMIT 104

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +   +  + R   + VVD    L GIIT  D+      D     V +V
Sbjct: 105 DPVTITPDATLAELDALCGQYRVSGLPVVDADGLLLGIITNRDLRFVPPGDFAQRRVHEV 164

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P +          A  LL  H I  L +VDD  +  G++   D ++
Sbjct: 165 MTKMPLITGPVGISREDAAALLGTHRIEKLPLVDDAGRLQGLITVKDFVK 214


>gi|146342162|ref|YP_001207210.1| hypothetical protein BRADO5312 [Bradyrhizobium sp. ORS278]
 gi|146194968|emb|CAL78993.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
           ORS278]
          Length = 242

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 56/142 (39%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  V     ++DA  I+ ++    + VVD   KL G+++EGD  R      
Sbjct: 2   RAHQIMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIRRTEIGT 61

Query: 281 ------------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                   +   V +VM ++P  I ED  L   ++++ ++++  
Sbjct: 62  GRKRGRWLRFILGPGKSAADFVHEHGRKVSEVMTRSPLTITEDAALAEIVEIMEKNHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VV    + +GIV   +LL+ 
Sbjct: 122 LPVV-KGDQVVGIVSRANLLQA 142



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  DT +  A  ++ Q ++S L VVD   K +G+V   D +R
Sbjct: 1   MRAHQIMTRPVITVTPDTSIVDAANIMLQRHVSGLPVVDASGKLVGVVSEGDFIR 55


>gi|332532703|ref|ZP_08408579.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
 gi|332037919|gb|EGI74368.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis ANT/505]
          Length = 489

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    + ++      
Sbjct: 41  NLPLISASMDTVTEARLAIALAQEGGLGFIHKNMTIEEQAKNVRKVKTYEAGIV---SYP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + DAI +  EK F    V D    L GI+T  D+   F   L    V  VM 
Sbjct: 98  VTVTADLTIADAIELSHEKGFSGFPVTDSNNVLVGIVTSRDMR--FETKL-EQPVSTVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 KKEKLVTVKEGAAREEILGLMHEHRIEKILVVDDEFKLKGMITVKDYQKA 204



 Score = 39.1 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    S VM   + +  VK G    + + ++ E R   + VVD+  KLKG+IT  D  +
Sbjct: 144 KLEQPVSTVMTKKEKLVTVKEGAAREEILGLMHEHRIEKILVVDDEFKLKGMITVKDYQK 203

Query: 275 NFHK 278
              K
Sbjct: 204 AQDK 207


>gi|260424764|ref|ZP_05733213.2| inosine-5'-monophosphate dehydrogenase [Dialister invisus DSM
           15470]
 gi|260403113|gb|EEW96660.1| inosine-5'-monophosphate dehydrogenase [Dialister invisus DSM
           15470]
          Length = 489

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 47  NIPVMSAGMDTVTESDMAIAMAREGGIG-----VIHKNMSIDEQCKEVEKVKRSEHGVIV 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ +     + V  +  KL GIIT  D+   F  DL+   + ++
Sbjct: 102 DPVYLNPDNTLSDADDLMVKYDISGIPVTVD-GKLVGIITNRDMR--FETDLSR-PISEI 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E+T L  A ++L++H I  L ++D      G++   D+
Sbjct: 158 MTSEGLITAPENTKLEEAKRILQEHRIEKLPLIDKDGYLKGLITIKDI 205


>gi|297201812|ref|ZP_06919209.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sviceus ATCC
           29083]
 gi|197717527|gb|EDY61561.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sviceus ATCC
           29083]
          Length = 500

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTESRMAIAMARLGGVGVLHRNLSVED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V
Sbjct: 101 MVTDPITVHPEATLAEADALCAKFRISGVPVTDPAGKLLGIVTNRDM--AFESD-RSRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM LLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 REVMTPMPLVTGKVGISGVEAMDLLRKHKIEKLPLVDDAGVLKGLITVKDFVKA 211


>gi|149003096|ref|ZP_01828005.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP14-BS69]
 gi|147758837|gb|EDK65833.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP14-BS69]
          Length = 372

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|15964513|ref|NP_384866.1| inositol-5-monophosphate dehydrogenase [Sinorhizobium meliloti
           1021]
 gi|307308461|ref|ZP_07588165.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium meliloti
           BL225C]
 gi|307319024|ref|ZP_07598455.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium meliloti
           AK83]
 gi|15073690|emb|CAC45332.1| Probable inosine-5'-monophosphate dehydrogenase [Sinorhizobium
           meliloti 1021]
 gi|306895438|gb|EFN26193.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium meliloti
           AK83]
 gi|306901064|gb|EFN31672.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium meliloti
           BL225C]
          Length = 500

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNLTPAEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA+ ++       + VV+ G        +L GI+T  D+         +  +
Sbjct: 105 IGPDATLADALGLMKAHGISGIPVVENGGLGGQTQGRLVGILTNRDVRFASDP---SQKI 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E      A +LL +H I  L+VVD   + +G++   D+
Sbjct: 162 YELMTRENLITVKESVDQQEAKRLLHKHRIEKLLVVDPEGRCVGLITVKDI 212


>gi|298373794|ref|ZP_06983783.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon
           274 str. F0058]
 gi|298274846|gb|EFI16398.1| inosine-5'-monophosphate dehydrogenase [Bacteroidetes oral taxon
           274 str. F0058]
          Length = 482

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+             +H    +         V    + + L
Sbjct: 37  NVPIVSAAMDTVTESAMAIAMAREGGLG-----FIHKNMSIENQAAEVDKVKRHENGMIL 91

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     LID   I        + VVD  + L G+IT  DI      +++   VE V
Sbjct: 92  NPVTVSKEDTLIDVEKICRRYHISGLPVVDSDKHLVGMITRRDIKYL---NIDNTKVEAV 148

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A  +L ++ I  L +VD+  + +G++   D+
Sbjct: 149 MTKDNLITAQVGTSLEEAKMILWKNRIEKLPIVDNQYRLVGLITSKDI 196


>gi|298245217|ref|ZP_06969023.1| inosine-5'-monophosphate dehydrogenase [Ktedonobacter racemifer DSM
           44963]
 gi|297552698|gb|EFH86563.1| inosine-5'-monophosphate dehydrogenase [Ktedonobacter racemifer DSM
           44963]
          Length = 500

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            V+H    + +       V  S   +  
Sbjct: 51  NIPIVSAAMDTVTEARLAIALAREGGIG-----VIHRNLSIESQAAEVDKVKRSESGMIT 105

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                    PL +A+ +++      + +  E  KL GI+T  D+   F  ++    + ++
Sbjct: 106 DPITLSPEAPLREALDVMAHFHISGIPIT-EEGKLVGILTNRDMR--FETNVGR-PISEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + N   +   T L  A ++L ++ +  L VVDD     G++   D+ + 
Sbjct: 162 MTRENLITVPVGTTLEQAREILHRYKVEKLPVVDDHNMLKGLITMKDIQKK 212


>gi|302524088|ref|ZP_07276430.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. AA4]
 gi|302432983|gb|EFL04799.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. AA4]
          Length = 503

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 43/205 (20%), Positives = 72/205 (35%), Gaps = 16/205 (7%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++ +T ++  ++   +D+V   +    +         P  SA M       +AIA+    
Sbjct: 16  MLGLTFDDVLLLPAESDVVPSAVDTSTQLTRNIKLNVPLVSAAMDTVTEARMAIAMARQG 75

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGC 253
                   VL     +         V  S                L +   + +  R   
Sbjct: 76  GIG-----VLQRNLPIEEQAAAVEVVKRSEAGMVTDPVTCSPDDTLAEVDALCARFRISG 130

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           V V D    L GIIT  D+        +T  V +VM + P V  +       A+ LLR+H
Sbjct: 131 VPVTDASGALVGIITNRDMRFEVD---HTRLVSEVMTRTPLVTAQVGVTAEAALGLLRRH 187

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L +VD   K  G++   D ++
Sbjct: 188 KIEKLPIVDGAGKLRGLITVKDFVK 212


>gi|254000112|ref|YP_003052175.1| putative signal transduction protein [Methylovorus sp. SIP3-4]
 gi|313202072|ref|YP_004040730.1| signal transduction protein [Methylovorus sp. MP688]
 gi|253986791|gb|ACT51648.1| putative signal transduction protein with CBS domains [Methylovorus
           sp. SIP3-4]
 gi|312441388|gb|ADQ85494.1| putative signal transduction protein with CBS domains [Methylovorus
           sp. MP688]
          Length = 142

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA+ I++E R G + V+  GQ L GI +E D  R      K   T  V D+M
Sbjct: 18  VGPDSLVYDALKIMAEYRVGALLVM-RGQALVGIFSERDYAREVVLKGKTSKTTPVSDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D  +   M L+    I  L V+ +  + +G++   DL++ 
Sbjct: 77  SHQVITVSPDQTVDECMNLMSGKRIRHLPVI-EHGQVVGVLSIGDLVKA 124



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G               +  V     + + + ++S KR   + V+ 
Sbjct: 51  FSERDYARE--VVLKGKTSKTTPVSDIMSHQVITVSPDQTVDECMNLMSGKRIRHLPVI- 107

Query: 259 EGQKLKGIITEGDIFRN 275
           E  ++ G+++ GD+ + 
Sbjct: 108 EHGQVVGVLSIGDLVKA 124


>gi|1794166|dbj|BAA11216.1| unnamed protein product [Vibrio parahaemolyticus]
          Length = 565

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 63/135 (46%), Gaps = 3/135 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +     ++            +  ++ +V     +     I+S+K   C  V ++   L 
Sbjct: 86  SINAQYSQVEKSLFFKRAKDLANHNVVVVHPNQSIQQVAQIMSKKGCTCALVTNDN-ALV 144

Query: 265 GIITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G++TE D+  R   +  N    VED+M  +P+ + +D  +  A+ L+ +HNI  + V+D 
Sbjct: 145 GMVTETDMTSRVVAEAFNIYRPVEDIMNAHPQSVDQDEPVISALNLMMKHNIRNIPVLDK 204

Query: 323 CQKAIGIVHFLDLLR 337
            ++ +G++   +L++
Sbjct: 205 NKQVLGLISPQELVQ 219


>gi|323701920|ref|ZP_08113590.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
           nigrificans DSM 574]
 gi|323533224|gb|EGB23093.1| inosine-5'-monophosphate dehydrogenase [Desulfotomaculum
           nigrificans DSM 574]
          Length = 484

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            V+H    +    +    V  S      
Sbjct: 43  NIPIMSAGMDTVTESRMAIAIAREGGIG-----VIHKNMSIKRQALEVDKVKRSEHGIIT 97

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    P+ DA  ++       V +  E  KL GI+T  D+    +++       DV
Sbjct: 98  DPIFLSPDSPIRDAHELMERYHISGVPITVE-GKLVGILTNRDLRFETNENRR---CGDV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N       T L  A Q+L +H +  L +VD+     G++   D+ +  
Sbjct: 154 MTKDNLITAPVGTTLEEAKQILMKHKVEKLPIVDEHYNLRGLITIKDIKKAK 205


>gi|307702792|ref|ZP_07639742.1| inosine-5'-monophosphate dehydrogenase [Streptococcus oralis ATCC
           35037]
 gi|307623648|gb|EFO02635.1| inosine-5'-monophosphate dehydrogenase [Streptococcus oralis ATCC
           35037]
          Length = 466

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 19  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 73

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 74  DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 130

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 131 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 180


>gi|307711206|ref|ZP_07647628.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK321]
 gi|307617168|gb|EFN96346.1| inosine-5'-monophosphate dehydrogenase [Streptococcus mitis SK321]
          Length = 492

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADDLMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEAGRLSGLITIKDI 206


>gi|255632210|gb|ACU16463.1| unknown [Glycine max]
          Length = 228

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 62/156 (39%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +      D M   + + +VK    + +A+ IL E R     V+D+  KL G++++ D+ 
Sbjct: 63  RSGLYTVGDFMTKKEDLHVVKPTTSVDEALEILVENRITGFPVIDDNWKLVGVVSDYDLL 122

Query: 274 R------NFHKDLNTLS-----------------------VEDVMIKNPKVILEDTLLTV 304
                  +  KD N                          + ++M   P V+ E T L  
Sbjct: 123 ALDSISGHGLKDNNMFPEVDSTWKTFNEVQKLLSKTNGKLIGELMTTAPMVVRETTNLED 182

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A +LL +     L VVD   + +GI+   +++R  +
Sbjct: 183 AARLLLETKFRRLPVVDAEGRLVGIITRGNVVRAAL 218


>gi|147920241|ref|YP_685992.1| hypothetical protein RCIX1391 [uncultured methanogenic archaeon
           RC-I]
 gi|110621388|emb|CAJ36666.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 292

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              +  V     + DA+  L+      V V +EG K+ GIIT  DI R    D     V 
Sbjct: 179 NHKLITVPSTSTVKDALVALARNDIHGVPV-EEGGKIVGIITYTDIGRAISADKGNSRVT 237

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + M      I  D  +  A+ L+ ++ I  L+V  +  +  G++  +D++
Sbjct: 238 EFMTPRVITIESDKPMYEAVALMNRNKIGRLLVT-EDGRPKGMITRVDVI 286



 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+D +      +   + +  A+  L +++I  + V ++  K +GI+ + D+ R 
Sbjct: 169 LPKKPVKDYINHKLITVPSTSTVKDALVALARNDIHGVPV-EEGGKIVGIITYTDIGRA 226


>gi|83816253|ref|YP_444750.1| putative mannose-1-phosphate guanyltransferase [Salinibacter ruber
           DSM 13855]
 gi|83757647|gb|ABC45760.1| putative mannose-1-phosphate guanyltransferase [Salinibacter ruber
           DSM 13855]
          Length = 350

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIK 291
           V+    + + + ++ E       V D    L+GI+T+GDI R   KDL+    V  VM +
Sbjct: 9   VRPDESIRETLEVIDEGAVQIAIVADGHDHLQGIVTDGDIRRGILKDLDLGAPVASVMNE 68

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P            +  +R   I  + +VD+  + +GI    DLL
Sbjct: 69  DPITARPQEDRQSLIDTMRARRIHQIPLVDNEGRVVGIEVLDDLL 113


>gi|56412552|ref|YP_149627.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197361487|ref|YP_002141123.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|56126809|gb|AAV76315.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197092963|emb|CAR58393.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 282

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMMRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATHCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|16765892|ref|NP_461507.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|167992703|ref|ZP_02573799.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168243362|ref|ZP_02668294.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|168261377|ref|ZP_02683350.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|194448429|ref|YP_002046634.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|16421119|gb|AAL21466.1| putative ABC superfamily transport protein [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|194406733|gb|ACF66952.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|205329082|gb|EDZ15846.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205337647|gb|EDZ24411.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL486]
 gi|205349631|gb|EDZ36262.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Hadar str. RI_05P066]
 gi|261247767|emb|CBG25595.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267994698|gb|ACY89583.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301159120|emb|CBW18634.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913561|dbj|BAJ37535.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321222723|gb|EFX47794.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130903|gb|ADX18333.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|332989499|gb|AEF08482.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 282

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|150395604|ref|YP_001326071.1| inosine 5'-monophosphate dehydrogenase [Sinorhizobium medicae
           WSM419]
 gi|150027119|gb|ABR59236.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium medicae
           WSM419]
          Length = 500

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 65/171 (38%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNLTPAEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA++++       + VV+ G        +L GI+T  D+         +  +
Sbjct: 105 IGPDATLADALSLMKTHGISGIPVVENGGLGGQTQGRLVGILTNRDVRFASDP---SQKI 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E      A +LL +H I  L+VVD   + +G++   D+
Sbjct: 162 YELMTRENLITVKESVDQQEAKRLLHKHRIEKLLVVDQDGRCVGLITVKDM 212


>gi|322369668|ref|ZP_08044232.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus
           paucihalophilus DX253]
 gi|320550838|gb|EFW92488.1| inosine-5'-monophosphate dehydrogenase [Haladaptatus
           paucihalophilus DX253]
          Length = 497

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 61/169 (36%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI +            VLH   ++ T+      V  + + I  
Sbjct: 53  NVPVLSAAMDTVTESEMAIEMARQGGLG-----VLHRNMEVDTMVDEIERVKRADELIIR 107

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   +++ +      VVD+  ++ GII+  DI        +   V + 
Sbjct: 108 DVVTANPEQTVREVDGMMARQGVSGAPVVDDDDEVLGIISGTDIRPYLEVG-DKDEVREA 166

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        E      A++L+ +H I  + +VD+     G+V    +L+
Sbjct: 167 MTDEVITATETVTAREALELMYEHKIERVPIVDEENHLTGLVTMQGVLQ 215


>gi|294462367|gb|ADE76732.1| unknown [Picea sitchensis]
          Length = 252

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 61/155 (39%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M   +++ +VK    + +A+  L   R   + VVD   KL G++++ D+  
Sbjct: 92  HEVFTVGDFMTRKENLIVVKPTTMVDEAMESLVANRITGLPVVDNDWKLVGVVSDYDLLA 151

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +N     N   V +VM  +P VI E T L  A
Sbjct: 152 LDSISGAGRTETGFFPQVGSTWKAFNELQNLLNKTNGKIVAEVMTPSPLVIRETTNLEDA 211

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD+  K +GI+   ++++  +
Sbjct: 212 ARLLLETKYRRLPVVDNSGKLVGILTRGNVIKAAL 246



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              S  +++    L DA  +L E ++  + VVD   KL GI+T G++ +   K
Sbjct: 195 MTPSPLVIRETTNLEDAARLLLETKYRRLPVVDNSGKLVGILTRGNVIKAALK 247


>gi|284162218|ref|YP_003400841.1| chloride channel core [Archaeoglobus profundus DSM 5631]
 gi|284012215|gb|ADB58168.1| Chloride channel core [Archaeoglobus profundus DSM 5631]
          Length = 587

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +   ++         V+ E  KL GIIT  DI R   ++     V DVM  N
Sbjct: 473 VTPDQTVGEVFRLIERTGHMGFPVL-EDGKLIGIITFEDIERVPLEERTKTKVRDVMTPN 531

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P     D  L  A++ +    +  L VV +  + +GI+   D+++ 
Sbjct: 532 PITASPDDDLKSALEKMVIRGVGRLPVV-ENGRLVGIITKGDIIKA 576



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + V+D M ++   +  D  +    +L+ +       V+ +  K IGI+ F D+ R
Sbjct: 457 LEEVKVKDAMTRDVMTVTPDQTVGEVFRLIERTGHMGFPVL-EDGKLIGIITFEDIER 513



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +         L  A+  +  +  G + VV E  +L GIIT+GDI + + +
Sbjct: 528 MTPNPITASPDDDLKSALEKMVIRGVGRLPVV-ENGRLVGIITKGDIIKAYVR 579


>gi|6705966|dbj|BAA89452.1| IMP dehydrogenase [Corynebacterium ammoniagenes]
          Length = 506

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       +AIA+            VLH              V  S   +   
Sbjct: 54  IPLASAAMDTVTEARMAIAMARQGGIG-----VLHRNLSSQEQAEQVEIVKRSESGMVTD 108

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                    + +   + +  R   + VV+E   L GI T  D+   F +D  +  V D+M
Sbjct: 109 PVTANPDMTIQEVDDLCARFRISGLPVVNEDGTLLGICTNRDMR--FERD-YSRKVSDIM 165

Query: 290 IKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P V+  E      A+ LL  + +  L +VD   K +G++   D ++
Sbjct: 166 TAMPLVVAKEGVSKEEALDLLSTNKVEKLPIVDKNNKLVGLITVKDFVK 214


>gi|332662181|ref|YP_004444969.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332330995|gb|AEE48096.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 144

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           V+    +IDA+ ++S++  G V V+DE  +L GI +E D  R      +   +  V +VM
Sbjct: 19  VRPDHMVIDALALMSQQGIGAVLVMDED-QLIGIFSERDYARKGIIVGRKAKSTPVTEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   +  D  +   M L  +  I  L V+ + QK IG++   D++  
Sbjct: 78  TANVFTVSPDMDIEDCMTLFSEKRIRHLPVM-ENQKVIGMLSIGDIVSA 125



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +  D ++  A+ L+ Q  I  ++V+D+ Q  IGI    D  R GII
Sbjct: 18  SVRPDHMVIDALALMSQQGIGAVLVMDEDQ-LIGIFSERDYARKGII 63



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+     G  +G              ++  V     + D +T+ SEKR   + V+ 
Sbjct: 52  FSERDYA--RKGIIVGRKAKSTPVTEVMTANVFTVSPDMDIEDCMTLFSEKRIRHLPVM- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           E QK+ G+++ GDI    
Sbjct: 109 ENQKVIGMLSIGDIVSAI 126


>gi|167549396|ref|ZP_02343155.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
 gi|205325202|gb|EDZ13041.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Saintpaul str. SARA29]
          Length = 282

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRTGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|256424385|ref|YP_003125038.1| signal transduction protein with CBS domains [Chitinophaga pinensis
           DSM 2588]
 gi|256039293|gb|ACU62837.1| putative signal transduction protein with CBS domains [Chitinophaga
           pinensis DSM 2588]
          Length = 146

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 59/119 (49%), Gaps = 3/119 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
           +   G ++  V+    + DA+++L +K  G + V+ + +K+ GI +E D  R      + 
Sbjct: 8   LRVKGHAVYSVQPDDTVFDALSVLVDKNVGALVVLGDNEKVLGIFSERDYARRVILKGRA 67

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + ++M ++P  + E+  +   M  +   +I  L V DD  + +G++   D++++
Sbjct: 68  SKETLIREIMTEHPFTVTEEDSIQDCMVKMTDKHIRHLPVTDDQLRLVGMISIGDVVKY 126


>gi|269121808|ref|YP_003309985.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
 gi|268615686|gb|ACZ10054.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
          Length = 187

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 76/188 (40%), Gaps = 16/188 (8%)

Query: 32  IAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + E R L  +   L      +        EK+    GR+ I G G+SG      A+ L  
Sbjct: 1   MTECRNLKLIIQELAENAKVIDNDQLIEAEKLIREAGRIFIAGAGRSGFAARGFANRLMH 60

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  S+FV            I + DLI++ S SG++  L ++   A+     L+ +T   
Sbjct: 61  LGFHSYFVGEPTTP-----SIQKGDLIVIGSGSGNTASLVSMAKKAKSQGAKLVTLTIFP 115

Query: 149 KSVVACHADIVLTLP------KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFS 200
           ++ +   AD+++ +P         +  P  + P  ++  QL+    D++ I L      +
Sbjct: 116 ENTIGSFADVIIQIPGVTSKADNEQEEPDSIQPKGNSFEQLSWLIYDSMIIDLKRETGQT 175

Query: 201 ENDFYVLH 208
           E   +  H
Sbjct: 176 EEQMFARH 183


>gi|196231756|ref|ZP_03130613.1| putative signal-transduction protein with CBS domains
           [Chthoniobacter flavus Ellin428]
 gi|196224228|gb|EDY18741.1| putative signal-transduction protein with CBS domains
           [Chthoniobacter flavus Ellin428]
          Length = 146

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +K    + +AI +++EK  G + VVD   +L GI+TE D  R      K     SV  +M
Sbjct: 21  IKPDATVYEAIELMAEKNIGALPVVDR-GRLLGILTERDYARKVILEGKSSKDTSVSAIM 79

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +     +   M+++    +  L V+ +    +GI+   D++R
Sbjct: 80  SRSPITVTPADTVGECMRIMTDKRVRHLPVM-EGGDFVGILSIGDVVR 126



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             N   I  D  +  A++L+ + NI  L VVD   + +GI+   D  R  I+
Sbjct: 15  SPNIWSIKPDATVYEAIELMAEKNIGALPVVD-RGRLLGILTERDYARKVIL 65



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 8/122 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-----FSENDFYVLHPGGKLG 214
           L   K P         T    ++L     +    +  R       +E D+         G
Sbjct: 10  LLSDKSPNIWSIKPDATVYEAIELMAEKNIGALPVVDRGRLLGILTERDYA--RKVILEG 67

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 S       S   V     + + + I+++KR   + V+ EG    GI++ GD+ R
Sbjct: 68  KSSKDTSVSAIMSRSPITVTPADTVGECMRIMTDKRVRHLPVM-EGGDFVGILSIGDVVR 126

Query: 275 NF 276
             
Sbjct: 127 WM 128


>gi|150399420|ref|YP_001323187.1| hypothetical protein Mevan_0669 [Methanococcus vannielii SB]
 gi|150012123|gb|ABR54575.1| protein of unknown function DUF39 [Methanococcus vannielii SB]
          Length = 513

 Score = 92.7 bits (229), Expect = 8e-17,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 2/102 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + +A  IL E     + +VDE + L GIIT  DI +   +D+   S+ ++M K+    
Sbjct: 405 MSITEASRILIENNINHLPIVDEKEMLSGIITSWDIAKAMAQDIG--SISEIMTKSVLCA 462

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D  + +A + + ++NIS L +VD     +G+V   D+ + 
Sbjct: 463 TPDETIDMAARKMSRNNISGLPIVDSNNMVVGVVSAEDISKL 504



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D++ +   V      +T A ++L ++NI+ L +VD+ +   GI+   D+ + 
Sbjct: 390 VKDILSRPAVVGTIKMSITEASRILIENNINHLPIVDEKEMLSGIITSWDIAKA 443


>gi|322375205|ref|ZP_08049719.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. C300]
 gi|321280705|gb|EFX57744.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. C300]
          Length = 474

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 27  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 81

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 82  DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 138

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 139 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGRLSGLITIKDI 188


>gi|163867475|ref|YP_001608674.1| inosine 5'-monophosphate dehydrogenase [Bartonella tribocorum CIP
           105476]
 gi|161017121|emb|CAK00679.1| inosine-5'-monophosphate dehydrogenase [Bartonella tribocorum CIP
           105476]
          Length = 498

 Score = 92.7 bits (229), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 72/203 (35%), Gaps = 20/203 (9%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + LT     +   +   P  SA M       LAIA+ ++         V+
Sbjct: 23  PGHSLVMPSQVDLTTRIAADIKLN--LPLLSAAMDTVTESRLAIAMAQAGGLG-----VI 75

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD----- 258
           H              V      + +          L +A  ++       + VV+     
Sbjct: 76  HRNMSSAEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKALMRFHGISGIPVVENSVKG 135

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVL 317
           E  +L GI+T  D+            + ++M   N   + E+  L+ A  LL  H I  L
Sbjct: 136 EAGRLVGILTNRDVRFASDP---KQKIYELMTHENLITVRENVQLSEAKYLLHHHRIEKL 192

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
           +VVD+  + +G++   D+ +  +
Sbjct: 193 LVVDEQNRCVGLITVKDIEKAKL 215


>gi|319891350|ref|YP_004148225.1| Inosine-5'-monophosphate dehydrogenase [Staphylococcus
           pseudintermedius HKU10-03]
 gi|317161046|gb|ADV04589.1| Inosine-5'-monophosphate dehydrogenase [Staphylococcus
           pseudintermedius HKU10-03]
          Length = 489

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 31  VDLSVELSDKIKLNIPVISAGMDTVTESKMAIAMARQGGLG-----VIHKNMSIERQADE 85

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +VD+   +KL GI+T  D+ 
Sbjct: 86  VQKVKRSENGVITDPFFLTPEESVYEAEALMGKYRISGVPIVDDKTSRKLVGILTNRDLR 145

Query: 274 RNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM  ++       T L  A ++L+ H I  L +V +     G++  
Sbjct: 146 --FIEDF-SIKISDVMTQEDLVTAPVGTTLQEAEEILQAHKIEKLPLV-EDGVLQGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|251771883|gb|EES52457.1| inosine-5'-monophosphate dehydrogenase [Leptospirillum
           ferrodiazotrophum]
          Length = 489

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 66/176 (37%), Gaps = 6/176 (3%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
                 +       P  SA M       LAIAL             L P  +   +    
Sbjct: 30  DTSIVLQEGIRLNIPVLSAAMDTVTEARLAIALAREGGMGVIH-RALSPEDQAHEVDKVK 88

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                       +     +  A+ I+   R   + VV + +KLKGI+T  D+     + +
Sbjct: 89  KSEAGMITDPITIDPDETVGRALEIMQTYRISGIPVV-KDKKLKGIVTNRDLRF---ETI 144

Query: 281 NTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T  V +VM  KN       T L  A +L ++H+I  L VV+D  +  G++   D+
Sbjct: 145 HTRKVSEVMTSKNLITAPVGTTLDAAKRLFQEHHIEKLPVVNDKNELDGLITIKDI 200


>gi|239833565|ref|ZP_04681893.1| Inosine-5'-monophosphate dehydrogenase [Ochrobactrum intermedium
           LMG 3301]
 gi|239821628|gb|EEQ93197.1| Inosine-5'-monophosphate dehydrogenase [Ochrobactrum intermedium
           LMG 3301]
          Length = 530

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 79  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLTPERQAEEVRQVKKFESGMVVNPVT 137

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 138 IGPDATLADAQALMKAHGISGIPVVENAAKGPGRLVGILTNRDVRFASDP---KQKIHEL 194

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 195 MTRENLITVRENVNQDEAKRLLHAHRIEKLLVVDDQGRCVGLVTVKDI 242


>gi|126667589|ref|ZP_01738559.1| CBS domain protein [Marinobacter sp. ELB17]
 gi|126628015|gb|EAZ98642.1| CBS domain protein [Marinobacter sp. ELB17]
          Length = 638

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 2/110 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
            +  +     P+  A+  + E   G + + D+ +   GI T  D+       K   + S+
Sbjct: 180 RNPIVCTPDLPVRKAVARMHENSVGSIVITDDNRHPVGIFTLRDLRTLIAEEKAPLSASI 239

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             VM  NP  +L       A  L+ +H+ + + VVDD  + IG+V   DL
Sbjct: 240 RQVMTPNPCSLLAKENAFAAAMLMAEHHFAHICVVDDENRLIGVVSERDL 289



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +E   ++NP V   D  +  A+  + ++++  +++ DD +  +GI    DL
Sbjct: 171 DSPLERFALRNPIVCTPDLPVRKAVARMHENSVGSIVITDDNRHPVGIFTLRDL 224


>gi|6561887|dbj|BAA88235.1| IMP dehydrogenase [Bacillus cereus]
          Length = 509

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|255323974|ref|ZP_05365100.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           tuberculostearicum SK141]
 gi|255299154|gb|EET78445.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           tuberculostearicum SK141]
          Length = 506

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 19/172 (11%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        +   + +        
Sbjct: 54  VPLASAAMDTVTEARMAIAMARQGGIGVLHRNLSTED--------QAEQVEIVKRSESGM 105

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                  +    + +   + +  R   + VVDE   L GI T  D+   F  D +   V 
Sbjct: 106 VTDPITARPDMTIGEVDALCARFRISGLPVVDEDGTLVGICTNRDMR--FEPDFDR-KVS 162

Query: 287 DVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM   P V+  E      A++LL  + +  L +VD   K  G++   D ++
Sbjct: 163 EVMTAMPLVVAREGVSKKEALELLSANKVEKLPIVDADNKLTGLITVKDFVK 214


>gi|269120169|ref|YP_003308346.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC
           33386]
 gi|268614047|gb|ACZ08415.1| inosine-5'-monophosphate dehydrogenase [Sebaldella termitidis ATCC
           33386]
          Length = 486

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 69/166 (41%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+       F   +  +     ++  +    S ++ +  ++
Sbjct: 41  NVPILSAAMDTVTESELAIAIAREGGIGFIHKNMTIERQAEEVEKVKRYESGMIANPVTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L +A  +L   +   + V+++   L GIIT  D+    ++D  T+ V+D+M 
Sbjct: 101 T---KNATLREANELLKHYKISGLPVIEKDGSLIGIITNRDLK---YRDDLTIKVKDIMT 154

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A Q+L +H I  L +V    K  G++   D+
Sbjct: 155 KENLVTAPVGTTLEEAKQILLEHRIEKLPIV-KNNKLKGLITIKDI 199


>gi|149183777|ref|ZP_01862180.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. SG-1]
 gi|148848510|gb|EDL62757.1| inositol-5-monophosphate dehydrogenase [Bacillus sp. SG-1]
          Length = 488

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 15/181 (8%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           +        +   P  SA M       +AIA+            ++H    +        
Sbjct: 32  IKVSLTDTLNLNVPVISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQVD 86

Query: 222 DVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRN 275
            V  S   +            + DA  ++ + R   V +V+  E QKL GI+T  D+   
Sbjct: 87  KVKRSESGVISDPFFLTPKHQVFDAEHLMGKYRISGVPIVNNVEEQKLVGILTNRDLR-- 144

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D  ++ + DVM K N       T L  A ++L+Q+ I  L ++DD     G++   D
Sbjct: 145 FIQD-YSIQISDVMTKDNLVTAPVGTTLDEAEKILQQYKIEKLPLIDDKGVLKGLITIKD 203

Query: 335 L 335
           +
Sbjct: 204 I 204


>gi|315127474|ref|YP_004069477.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp.
           SM9913]
 gi|315015988|gb|ADT69326.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas sp.
           SM9913]
          Length = 489

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    + ++      
Sbjct: 41  NLPLISASMDTVTEARLAIALAQEGGLGFIHKNMTIAEQAKNVRKVKTYEAGIV---SYP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + DA+ +  EK F    V D    L GI+T  D+   F   L    V  VM 
Sbjct: 98  VTVTADLTIADAVELSQEKGFSGFPVTDSENNLVGIVTSRDMR--FETKL-EQPVSTVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  N   + E T     + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 KKENLVTVKEGTAREDILSLMHEHRIEKILVVDDAFKLKGMITVKDYQKA 204



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 21/64 (32%), Positives = 32/64 (50%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    S VM   +++  VK G    D ++++ E R   + VVD+  KLKG+IT  D  +
Sbjct: 144 KLEQPVSTVMTKKENLVTVKEGTAREDILSLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203

Query: 275 NFHK 278
              K
Sbjct: 204 AQDK 207


>gi|296119265|ref|ZP_06837833.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           ammoniagenes DSM 20306]
 gi|295967657|gb|EFG80914.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           ammoniagenes DSM 20306]
          Length = 506

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       +A+A+            VLH              V  S   +   
Sbjct: 54  IPLASAAMDTVTEARMAVAMARQGGIG-----VLHRNLSSEEQAEQVEIVKRSESGMVTD 108

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                    + +   + +  R   + VVDE   L GI T  D+   F +D  +  V ++M
Sbjct: 109 PVTAHPDMSIQEVDDLCARFRISGLPVVDEDGTLLGICTNRDMR--FERD-YSRKVSEIM 165

Query: 290 IKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P V+  E      A++LL  + +  L ++DD  K +G++   D ++
Sbjct: 166 TSMPLVVAKEGVSKDEALELLSANKVEKLPIIDDNNKLVGLITVKDFVK 214


>gi|240849847|ref|YP_002971235.1| inosine-5'-monophosphate dehydrogenase [Bartonella grahamii as4aup]
 gi|240266970|gb|ACS50558.1| inosine-5'-monophosphate dehydrogenase [Bartonella grahamii as4aup]
          Length = 499

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/200 (17%), Positives = 71/200 (35%), Gaps = 13/200 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L+     +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVDLSTRIAADIKLN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A +++       + VV+         
Sbjct: 80  SPAEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKSLMRSHGISGIPVVENSVKGETAG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L GI+T  D+            + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 RLVGILTNRDVRFASDP---KQKIYELMTHENLITVRENVQLNEAKYLLHHHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  + +G++   D+ +  +
Sbjct: 197 DEQNRCVGLITVKDIEKAKL 216


>gi|297192632|ref|ZP_06910030.1| inosine 5' monophosphate dehydrogenase [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197722967|gb|EDY66875.1| inosine 5' monophosphate dehydrogenase [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 499

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 66/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 48  NIPLLSAAMDKVTESRMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 99

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F   + T  V
Sbjct: 100 MVTDPITVHPDATLAEADALCAKFRISGVPVTDAAGKLLGIVTNRDM--AFET-VRTRQV 156

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM+LLR+H I  L +VDD     G++   D ++ 
Sbjct: 157 REVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDAGILKGLITVKDFVKA 210


>gi|319899248|ref|YP_004159341.1| inosine-5'-monophosphate dehydrogenase [Bartonella clarridgeiae 73]
 gi|319403212|emb|CBI76771.1| inosine-5'-monophosphate dehydrogenase [Bartonella clarridgeiae 73]
          Length = 499

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/200 (17%), Positives = 69/200 (34%), Gaps = 13/200 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L      +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVNLKTRIAADIELN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A  ++       + VV+         
Sbjct: 80  SPAEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKALMRSHSISGIPVVESDAKSGIFG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L GI+T  D+            + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 RLVGILTNRDVRFASDP---KQKIRELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  + +G+V   D+ +  +
Sbjct: 197 DEQNRCVGLVTVKDIEKARL 216


>gi|213857536|ref|ZP_03384507.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
          Length = 282

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|303244925|ref|ZP_07331250.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484690|gb|EFL47629.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 145

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 7/112 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
                ++ A   L + +  C+ VVD+ +K+ GIIT  DI  N   D  TL   V DVM K
Sbjct: 27  HPDTGVVKAFETLLKYKISCLPVVDKDKKVIGIITTTDIGYNLILDEYTLDTKVSDVMTK 86

Query: 292 NPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I  +  +  A++ + ++      I+ L VVD+  K IG+V   D++R 
Sbjct: 87  DVITITSNKSIIEAIRRMDEYGHKGEIINQLPVVDENNKLIGVVSDGDIIRA 138



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 32/57 (56%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  + ++D+M K+      DT +  A + L ++ IS L VVD  +K IGI+   D+
Sbjct: 9   NIFNIKIKDIMAKDVIYTHPDTGVVKAFETLLKYKISCLPVVDKDKKVIGIITTTDI 65



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 5/62 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHKDL 280
               +  +     +I+AI  + E          + VVDE  KL G++++GDI R   K L
Sbjct: 84  MTKDVITITSNKSIIEAIRRMDEYGHKGEIINQLPVVDENNKLIGVVSDGDIIRALSKFL 143

Query: 281 NT 282
             
Sbjct: 144 KK 145


>gi|15790114|ref|NP_279938.1| hypothetical protein VNG1001G [Halobacterium sp. NRC-1]
 gi|10580558|gb|AAG19418.1| inosine monophosphate dehydrogenase [Halobacterium sp. NRC-1]
          Length = 527

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 12/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS------G 227
            P  SA M       LAIA+            VLH       +      V  +       
Sbjct: 82  VPVLSAAMDTVTESRLAIAMAREGGLG-----VLHQNMDTDRVVAEVERVKRADELVIDR 136

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +++        +     ++         VVD+   ++GII+  DI        +   V +
Sbjct: 137 ENVVTAAPEQTVEAVDEMMDRSDVSGAPVVDDDDTVRGIISATDIRPYLEVGESDA-VRE 195

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M        ED     A++L+ +H I  + +V+D Q  +G+V    +L
Sbjct: 196 AMTDEVITAPEDITARDALELMYEHKIERVPIVNDEQHLVGLVTMQGIL 244


>gi|255587643|ref|XP_002534340.1| conserved hypothetical protein [Ricinus communis]
 gi|223525462|gb|EEF28042.1| conserved hypothetical protein [Ricinus communis]
          Length = 239

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +      D M   + + +VK    + +A+  L E R     V+D+  KL G++++ D+  
Sbjct: 75  SGVYTVGDFMTRKEDLCVVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYDLLA 134

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   V D+M   P V+ E T L  A
Sbjct: 135 LDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDA 194

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 195 ARLLLETKYRRLPVVDAEGKLVGIITRGNVVRAAL 229


>gi|254167690|ref|ZP_04874541.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289596908|ref|YP_003483604.1| CBS domain containing membrane protein [Aciduliprofundum boonei
           T469]
 gi|197623499|gb|EDY36063.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289534695|gb|ADD09042.1| CBS domain containing membrane protein [Aciduliprofundum boonei
           T469]
          Length = 380

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HK 278
           S V +     P++     + DA+ ++ +  +  + +V E  KL GII+  DI +     K
Sbjct: 68  SRVENIMVKPPVLDPDASIEDAVKLMIDAGYRSLPIV-EKNKLVGIISRTDIIKLVPKMK 126

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+  + VEDVM   P+++ ED+ +  A+ ++++     + VVD+ +K +GIVH  D  + 
Sbjct: 127 DVANIPVEDVMTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMRDAAKA 186



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + + K+G  +  AI+ + E  F  + VV++  +L G +    + R     L +  V
Sbjct: 12  MTKDVVVAKLGDTISKAISKMQEHGFHELPVVNDRGELVGYVNYRTLIRRKSLSLYS-RV 70

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E++M+K P V+  D  +  A++L+       L +V+   K +GI+   D+++ 
Sbjct: 71  ENIMVKPP-VLDPDASIEDAVKLMIDAGYRSLPIVEK-NKLVGIISRTDIIKL 121



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
                 LV+   P+  A+ I+ +     V VVDE +KL GI+   D  +   ++    S 
Sbjct: 137 MTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMRDAAKAVWREKERASL 196

Query: 285 -------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                        V+++M+  P  + ED++L  A++ + + + S+  V+D     IG++ 
Sbjct: 197 GEVSGEKKKVQILVKEIMVP-PVYVSEDSILKDAVEKMIEFHSSICAVIDKKSVPIGVIS 255

Query: 332 FLDLLRF 338
             D++  
Sbjct: 256 QRDVIEA 262



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 31/56 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V+DVM K+  V      ++ A+  +++H    L VV+D  + +G V++  L+R
Sbjct: 5   EIKVKDVMTKDVVVAKLGDTISKAISKMQEHGFHELPVVNDRGELVGYVNYRTLIR 60



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 21/53 (39%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                 V     L DA+  + E      AV+D+     G+I++ D+     ++
Sbjct: 214 MVPPVYVSEDSILKDAVEKMIEFHSSICAVIDKKSVPIGVISQRDVIEAILRE 266


>gi|124027316|ref|YP_001012636.1| voltage-gated chloride channel protein [Hyperthermus butylicus DSM
           5456]
 gi|123978010|gb|ABM80291.1| Voltage-gated chloride channel protein [Hyperthermus butylicus DSM
           5456]
          Length = 563

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 3/128 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              L            S+ +V+   PL   I + +E       VV +  ++ G+IT  D+
Sbjct: 429 GERLLRQIKVRDIMTRSVVVVRPDDPLKRVIELTAETHHTGFPVVVD-GRVVGMITLSDV 487

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIV 330
            R  H +L  + V++ M ++   +L D  L  A++ + ++ I  L VV+  +  K IGI+
Sbjct: 488 LRYRHSELGKVKVKEAMTRSVIAVLPDDSLADALRKMLRYGIGRLPVVENYESMKLIGII 547

Query: 331 HFLDLLRF 338
              D++R 
Sbjct: 548 TKKDIVRA 555



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 32/67 (47%), Gaps = 1/67 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +     + L  + V D+M ++  V+  D  L   ++L  + + +   VV    + +G++ 
Sbjct: 425 LRELGERLLRQIKVRDIMTRSVVVVRPDDPLKRVIELTAETHHTGFPVV-VDGRVVGMIT 483

Query: 332 FLDLLRF 338
             D+LR+
Sbjct: 484 LSDVLRY 490



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDI 272
           +             S+  V     L DA+  +     G + VV+  E  KL GIIT+ DI
Sbjct: 493 SELGKVKVKEAMTRSVIAVLPDDSLADALRKMLRYGIGRLPVVENYESMKLIGIITKKDI 552

Query: 273 FRNFH 277
            R + 
Sbjct: 553 VRAYE 557


>gi|23016740|ref|ZP_00056493.1| COG0516: IMP dehydrogenase/GMP reductase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 486

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 14/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
            P  SA M       LAIAL +          V+H    +         V      + + 
Sbjct: 40  IPLLSAAMDTVTESRLAIALAQDGGIG-----VIHKNLDMDAQAAEVRKVKKFESGMVVN 94

Query: 233 ---VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +     L DA+ ++S+ +   + VV+ G  KL GI+T  D+      +     V ++
Sbjct: 95  PLTIHPDQTLADALRLMSDYKISGIPVVERGSGKLVGILTNRDVRFA---NDAAQPVYEL 151

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+    + E      A +LL QH I  L+VVD   + IG+V   D+ + 
Sbjct: 152 MTKDKLVTVREGVDKEEAKRLLHQHRIEKLLVVDSDYRCIGLVTVKDMEKA 202


>gi|327394835|dbj|BAK12257.1| putative HTH-type transcriptional regulator YfhH [Pantoea ananatis
           AJ13355]
          Length = 279

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 5/187 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K      + ++ +  ++     ++ EK  LS++ ++L      + +  ++ +K  + R++
Sbjct: 77  KDAITVHNQILSDDPLKAVGEKLLTEK--LSAIRATLDINSEEKLNAVLQLLKRAR-RIL 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + GIG SG +    +  L   G  +       A    +  ++  D+++ +S++G   E+ 
Sbjct: 134 LVGIGASGLVAKDFSWKLMKIGINAVAEQDMHALLASVQAMSSGDVLLAISYTGERREIN 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
                A R    ++A T    + +   A   L    E +S     A  +S   QLA+ D 
Sbjct: 194 LAAQEAVRVGADVLAFTGFTPNTLQQCATHCLYTVAEEQSTR--SAAISSTTAQLALTDL 251

Query: 189 LAIALLE 195
           L +AL++
Sbjct: 252 LFMALVQ 258


>gi|237739961|ref|ZP_04570442.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 2_1_31]
 gi|229421978|gb|EEO37025.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 2_1_31]
          Length = 487

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 99  ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTNLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|16761484|ref|NP_457101.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140819|ref|NP_804161.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62181137|ref|YP_217554.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|168232150|ref|ZP_02657208.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|168238317|ref|ZP_02663375.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|168821438|ref|ZP_02833438.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|194444928|ref|YP_002041835.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194471434|ref|ZP_03077418.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194737916|ref|YP_002115635.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|198242293|ref|YP_002216639.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205353668|ref|YP_002227469.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857979|ref|YP_002244630.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213023047|ref|ZP_03337494.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
 gi|213052949|ref|ZP_03345827.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E00-7866]
 gi|213417147|ref|ZP_03350291.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E01-6750]
 gi|213619370|ref|ZP_03373196.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-2068]
 gi|213646362|ref|ZP_03376415.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
 gi|224582886|ref|YP_002636684.1| DNA-binding transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238912690|ref|ZP_04656527.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289811422|ref|ZP_06542051.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
 gi|25303542|pir||AB0828 probable transcription regulator yfhH [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503784|emb|CAD02774.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136444|gb|AAO68010.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62128770|gb|AAX66473.1| putative ABC superfamily (membrane) transport protein [Salmonella
           enterica subsp. enterica serovar Choleraesuis str.
           SC-B67]
 gi|194403591|gb|ACF63813.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194457798|gb|EDX46637.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CVM29188]
 gi|194713418|gb|ACF92639.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197288873|gb|EDY28246.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|197936809|gb|ACH74142.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|205273449|emb|CAR38426.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205333627|gb|EDZ20391.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Kentucky str. CDC 191]
 gi|205342035|gb|EDZ28799.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Weltevreden str. HI_N05-537]
 gi|206709782|emb|CAR34134.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467413|gb|ACN45243.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|320087073|emb|CBY96842.1| Bifunctional protein glk Includes: Glucokinase; Glucose kinase;
           Includes: RecName: Full=putative HTH-type
           transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322613342|gb|EFY10284.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322620454|gb|EFY17319.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322625078|gb|EFY21907.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322629478|gb|EFY26254.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322633865|gb|EFY30604.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322635471|gb|EFY32182.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322639853|gb|EFY36532.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644261|gb|EFY40805.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649953|gb|EFY46373.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322654864|gb|EFY51181.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322658208|gb|EFY54474.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322661720|gb|EFY57938.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322669701|gb|EFY65847.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673292|gb|EFY69397.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322674919|gb|EFY71006.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322682942|gb|EFY78960.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322685603|gb|EFY81598.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|322715627|gb|EFZ07198.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
 gi|323191969|gb|EFZ77207.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323200398|gb|EFZ85479.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323201298|gb|EFZ86365.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323208368|gb|EFZ93308.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211556|gb|EFZ96394.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215988|gb|EGA00720.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323221768|gb|EGA06176.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323225623|gb|EGA09850.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323229341|gb|EGA13465.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323235344|gb|EGA19428.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323237470|gb|EGA21533.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323245225|gb|EGA29226.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323248799|gb|EGA32726.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323254021|gb|EGA37842.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323259069|gb|EGA42717.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323261991|gb|EGA45556.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323267775|gb|EGA51256.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269666|gb|EGA53118.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|326624394|gb|EGE30739.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|326628772|gb|EGE35115.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 282

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|163940057|ref|YP_001644941.1| RpiR family transcriptional regulator [Bacillus weihenstephanensis
           KBAB4]
 gi|229011538|ref|ZP_04168724.1| RpiR family transcriptional regulator [Bacillus mycoides DSM 2048]
 gi|229167102|ref|ZP_04294845.1| RpiR family transcriptional regulator [Bacillus cereus AH621]
 gi|163862254|gb|ABY43313.1| transcriptional regulator, RpiR family [Bacillus weihenstephanensis
           KBAB4]
 gi|228616336|gb|EEK73418.1| RpiR family transcriptional regulator [Bacillus cereus AH621]
 gi|228749693|gb|EEL99532.1| RpiR family transcriptional regulator [Bacillus mycoides DSM 2048]
          Length = 284

 Score = 92.3 bits (228), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H           ++++ V  A +   +    ++ L+ +L          AV  +   K R
Sbjct: 80  HTPMQNIHEEVSVEDNIVTVAKKVFHSH---ITGLQDTLHLLNDNALEQAVSALNEAK-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  A I L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYQKSALSQLAHITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|329938170|ref|ZP_08287621.1| inosine 5-monophosphate dehydrogenase [Streptomyces
           griseoaurantiacus M045]
 gi|329302659|gb|EGG46549.1| inosine 5-monophosphate dehydrogenase [Streptomyces
           griseoaurantiacus M045]
          Length = 500

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 66/189 (34%), Gaps = 13/189 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A   +              P  SA M       +AIA+            VLH    + 
Sbjct: 31  MAPDEIDTASYVSKNVRVNIPLLSAAMDKVTESRMAIAMARQGGVG-----VLHRNLSIE 85

Query: 215 TLFVCASDVMHSGD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S          +     L +A  + ++ R   V V D   KL GI+T  
Sbjct: 86  DQANQVDLVKRSESGMVADPITIHPEATLAEADALCAKFRISGVPVTDGAGKLLGIVTNR 145

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D  +  V +VM   P V  +       AM+LLR+H I  L +VDD     G+
Sbjct: 146 DM--AFEND-RSRRVSEVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDQGVLKGL 202

Query: 330 VHFLDLLRF 338
           +   D ++ 
Sbjct: 203 ITVKDFVKA 211


>gi|313679924|ref|YP_004057663.1| signal transduction protein with cbs domains [Oceanithermus
           profundus DSM 14977]
 gi|313152639|gb|ADR36490.1| putative signal transduction protein with CBS domains
           [Oceanithermus profundus DSM 14977]
          Length = 215

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              +   V    P++DAI +L ++ +  + V+ E  +L GI+T+ D+             
Sbjct: 7   MTPNPRTVTPDTPVLDAIKLLKDQGYRRLPVL-EADRLVGIVTDKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ L+V +VM K    +  D  L  A  L+ ++ +  L V+ +  K +GI+   
Sbjct: 66  WELNYLLSKLTVSEVMAKPVITVDADEPLEEAALLMEEYKVGGLPVLSE-GKLVGIITIT 124

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 125 DVLKA 129



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  NP+ +  DT +  A++LL+      L V++   + +GIV   DL
Sbjct: 3   VRDWMTPNPRTVTPDTPVLDAIKLLKDQGYRRLPVLEAD-RLVGIVTDKDL 52



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    PL +A  ++ E + G + V+ E  KL GIIT  D+ + F
Sbjct: 81  MAKPVITVDADEPLEEAALLMEEYKVGGLPVLSE-GKLVGIITITDVLKAF 130


>gi|168466667|ref|ZP_02700521.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
 gi|195630772|gb|EDX49364.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Newport str. SL317]
          Length = 282

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|320100838|ref|YP_004176430.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
 gi|319753190|gb|ADV64948.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
          Length = 141

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
                  +K   P+  A  ++ E     V VV+    L GI+T  D+            +
Sbjct: 18  MSTPPITIKETEPVEKAAKLMFENNTSSVIVVNNDGVLTGIVTAKDVVAAVALGRIGQGI 77

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V   M +NP  I  D  +T A++ +R+ N+  L VVD   + IG+V   D++
Sbjct: 78  PVGRFMKENPLTISPDASITDALEKMREFNVRHLPVVDKDNRPIGMVSVRDIM 130



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L + D+M   P  I E   +  A +L+ ++N S ++VV++     GIV   D++  
Sbjct: 12  LRISDIMSTPPITIKETEPVEKAAKLMFENNTSSVIVVNNDGVLTGIVTAKDVVAA 67



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            LG +           ++   +     + DA+  + E     + VVD+  +  G+++  D
Sbjct: 69  ALGRIGQGIPVGRFMKENPLTISPDASITDALEKMREFNVRHLPVVDKDNRPIGMVSVRD 128

Query: 272 IF 273
           I 
Sbjct: 129 IM 130


>gi|313680386|ref|YP_004058125.1| cbs domain containing protein [Oceanithermus profundus DSM 14977]
 gi|313153101|gb|ADR36952.1| CBS domain containing protein [Oceanithermus profundus DSM 14977]
          Length = 209

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 9/126 (7%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   DVMHS      +  G  L +A  ++ E+    + VV EG ++ GIIT+ D+     
Sbjct: 1   MLVRDVMHSPVIT--ISTGATLEEANALMWEQGIRHLPVV-EGGRIVGIITDRDVRLATS 57

Query: 278 K-----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +           VE+VM            +  A +++R   I  L VVD  ++ +GI+  
Sbjct: 58  ELSPMPFTPQARVEEVMTTPVLTADPLDPVEEAARVMRDRKIGCLPVVD-GRELVGIITG 116

Query: 333 LDLLRF 338
           +DLL  
Sbjct: 117 IDLLDA 122



 Score = 39.1 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            P+ +A  ++ +++ GC+ VVD G++L GIIT  D+    
Sbjct: 85  DPVEEAARVMRDRKIGCLPVVD-GRELVGIITGIDLLDAL 123


>gi|257460824|ref|ZP_05625925.1| inosine-5'-monophosphate dehydrogenase [Campylobacter gracilis
           RM3268]
 gi|257442155|gb|EEV17297.1| inosine-5'-monophosphate dehydrogenase [Campylobacter gracilis
           RM3268]
          Length = 483

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 61/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            V+H      +       V  S   + +
Sbjct: 40  NTPLVSAAMDTVTEYRTAIMMARLGGIG-----VIHKNMDEDSQAKMVRRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + DA+ ++ E     + V+D    L GI+T  D+   F  D   L V + 
Sbjct: 95  DPISIKADATIKDALDLMGEYHISGIPVIDNNGVLIGILTNRDLR--FETDTAAL-VGEK 151

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K P     +   L  A ++ R + +  L ++D      G++   DL +
Sbjct: 152 MTKAPLITAPKGCTLDDAEKIFRNNKVEKLPIIDANGHLEGLITIKDLKK 201



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 15/110 (13%)

Query: 233 VKIGCPL-IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV--- 288
           + +  PL   A+  ++E R   +       +L GI   G I +N  +D     V  V   
Sbjct: 37  ITLNTPLVSAAMDTVTEYRTAIMM-----ARLGGI---GVIHKNMDEDSQAKMVRRVKKS 88

Query: 289 ---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +I +P  I  D  +  A+ L+ +++IS + V+D+    IGI+   DL
Sbjct: 89  ESGVIIDPISIKADATIKDALDLMGEYHISGIPVIDNNGVLIGILTNRDL 138


>gi|227875109|ref|ZP_03993254.1| IMP dehydrogenase [Mobiluncus mulieris ATCC 35243]
 gi|269977857|ref|ZP_06184813.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris 28-1]
 gi|306818376|ref|ZP_07452102.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris ATCC
           35239]
 gi|307701434|ref|ZP_07638453.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris
           FB024-16]
 gi|227844387|gb|EEJ54551.1| IMP dehydrogenase [Mobiluncus mulieris ATCC 35243]
 gi|269933937|gb|EEZ90515.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris 28-1]
 gi|304648885|gb|EFM46184.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris ATCC
           35239]
 gi|307613344|gb|EFN92594.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus mulieris
           FB024-16]
          Length = 512

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/206 (19%), Positives = 69/206 (33%), Gaps = 15/206 (7%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIA 192
            +    +    D VL LP+E +  P                 P  SA M       +AIA
Sbjct: 16  KDPYGALGLTYDDVLLLPEETDVIPAEVDTSTQLTRNITLKIPLISAAMDTVTESRMAIA 75

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           +            +  P      L V  S+          +     +        + R  
Sbjct: 76  MARQGGIGIVHRNLSIPEQASQVLQVKRSESGM-LYDPVTIYPDATIEQLDQQCGKYRVS 134

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQ 311
            + VVD+ +KL GIIT  D+      +   L+V + M   P            A++LL +
Sbjct: 135 GLPVVDDNRKLVGIITNRDLRFIPAAEWGRLTVRECMTPMPLITGRTGISREEALELLAK 194

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           + I  L ++D      G++   D ++
Sbjct: 195 NRIEKLPLIDPDGTLTGLITVKDFVK 220


>gi|302343798|ref|YP_003808327.1| inosine-5'-monophosphate dehydrogenase [Desulfarculus baarsii DSM
           2075]
 gi|301640411|gb|ADK85733.1| inosine-5'-monophosphate dehydrogenase [Desulfarculus baarsii DSM
           2075]
          Length = 487

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 63/168 (37%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +             +H    L    +    V  S   + +
Sbjct: 41  QTPLVSAAMDTVTEADTAITMARHGGLG-----FIHKNLSLQDQAIEVIKVKKSESGMIV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +   + ++S  R   V VV E +KL GIIT  D+   F  +L+   V +V
Sbjct: 96  DPITVGPDNTIAQVLELMSRYRVSGVPVVVENRKLVGIITNRDLR--FETNLDQ-KVSEV 152

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+    + E   L  +  +L +H I  L+V  D     G++   D+
Sbjct: 153 MTKDRLVTVREGITLEESKAVLHKHRIEKLLVTTDDGTLKGLITIKDI 200


>gi|212716445|ref|ZP_03324573.1| hypothetical protein BIFCAT_01369 [Bifidobacterium catenulatum DSM
           16992]
 gi|212660698|gb|EEB21273.1| hypothetical protein BIFCAT_01369 [Bifidobacterium catenulatum DSM
           16992]
          Length = 514

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S +D        +   + +       
Sbjct: 57  KVPAISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 108

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    V     L D   +        + VVD   KL GIIT  D+     +D + L V
Sbjct: 109 MINDPLTVSPDVTLADLDKLCGRFHISGLPVVDNDNKLVGIITNRDMRFIASEDYDRLKV 168

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM + N      +     A  LL ++ +  L +VDD     G++   D ++
Sbjct: 169 SEVMTRENLITGPSNISKEDAHDLLAKYKVEKLPLVDDEGHLTGLITVKDFVK 221


>gi|146309557|ref|YP_001190022.1| CBS domain-containing protein [Pseudomonas mendocina ymp]
 gi|145577758|gb|ABP87290.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Pseudomonas mendocina ymp]
          Length = 639

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------- 258
            G     + +    ++  G     V +  P+     +++E     V VVD          
Sbjct: 142 HGKASELMKIKVRKLISRGAVS--VPLDTPIQQVAQVMTEHGVSSVIVVDPGTRWPDPQQ 199

Query: 259 ------EGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                 + Q + GI+T+ D+  R     L ++  V  VM  NP  +  D  +  AM  + 
Sbjct: 200 VDVAEQQNQVMAGILTDRDLRTRVVAAGLPSSTPVSQVMTPNPVTLQADDSVFEAMLCML 259

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++NI  L ++   ++ +G+V   D++R+
Sbjct: 260 RNNIHHLPIL-HRRRPVGVVALADIVRY 286


>gi|239925803|gb|ACS35536.1| myosin 29 [Phaeodactylum tricornutum]
          Length = 2303

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 231  PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHK--DLNTLSVED 287
             +V     + +A  +++E R   + V  +   L G+ T  D + R   K  DL+  SV D
Sbjct: 1629 TIVHPSASIREAGILMAETRKAALVV--DNDVLVGVFTFKDMLSRAVAKGLDLDATSVAD 1686

Query: 288  VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VM   P+ +  D     A+Q +  +    L V +     +G+V  LD++
Sbjct: 1687 VMTPEPESVSPDMNALEALQTMHDNRFLTLPVCESDGTIVGLVEVLDVI 1735



 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 227  GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTL-- 283
                  V+    +     +L+ KR     VV     L GI+T+ DI  R   K ++T   
Sbjct: 1447 PAKPVTVEPSSSIDSVAQLLAMKRANATVVVSSDGSLSGILTDTDITRRVVAKFVDTALS 1506

Query: 284  SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +V++VM   P  +  +     A+ ++ +++   L VVDD    +G++  
Sbjct: 1507 TVDEVMTPFPTCVAMEDSAMDALTIMLENHFRHLPVVDDRGIVVGLLDI 1555



 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 5/122 (4%)

Query: 214  GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             T     S +  S      +     ++     LS KR     VV     L GI+T+ DI 
Sbjct: 1788 STNERPVSKLRPSKPITSRI--DDTILRVSQTLSSKRGAASLVVSTDGSLAGIMTDTDIT 1845

Query: 274  RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     H D +  SV +VM  NP  +        A+  + +++   L VVDD    +G++
Sbjct: 1846 RRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLL 1905

Query: 331  HF 332
              
Sbjct: 1906 DI 1907



 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 231  PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVED 287
             LV     + +    +++ R     VVD+  +L G+ T  D+  R   K  DL+   V  
Sbjct: 1980 TLVDPSTSIRNCGLRMADSR-KAALVVDD-GELVGVFTFKDMMSRAVAKELDLDVTPVSQ 2037

Query: 288  VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VM  +P+ +  D  +  A+Q +  +    L V +   + +G+V  +D++
Sbjct: 2038 VMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVI 2086



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 31/187 (16%), Positives = 57/187 (30%), Gaps = 53/187 (28%)

Query: 199  FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
             ++ D         + T      +VM    +   V +    +DA+TI+ E  F  + VVD
Sbjct: 1487 LTDTDITRRVVAKFVDTALSTVDEVMTPFPTC--VAMEDSAMDALTIMLENHFRHLPVVD 1544

Query: 259  EGQKLKGII---------------TEGDIFRNFHKDLNTLSV-----------------E 286
            +   + G++               T     R     +  + V                  
Sbjct: 1545 DRGIVVGLLDIAKCLDDAIGKLEKTNKQSSRAGEDAVKNILVNKSGSIDSQAVALQALLG 1604

Query: 287  DVMIK----------------NPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            ++M K                 P  I      +  A  L+ +      +VVD+    +G+
Sbjct: 1605 NLMAKAFGDKTVPTLRALLGGKPGTIVHPSASIREAGILMAETR-KAALVVDND-VLVGV 1662

Query: 330  VHFLDLL 336
              F D+L
Sbjct: 1663 FTFKDML 1669



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 200  SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            ++ D         + T     S+VM    +   V +    +DA+T + E  F  + VVD+
Sbjct: 1840 TDTDITRRVVAKHIDTSATSVSEVMTPNPTC--VAMSDSAMDALTTMVENHFRHLPVVDD 1897

Query: 260  GQKLKGIITEGDIFRNFHKDLNTL 283
               + G++   DI +  +  ++ L
Sbjct: 1898 QGSVVGLL---DIAKCLNDAISKL 1918


>gi|66819969|ref|XP_643641.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
 gi|60471523|gb|EAL69479.1| hypothetical protein DDB_G0275457 [Dictyostelium discoideum AX4]
          Length = 259

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIF---RNFHKDL 280
                I  VK    + DAI +++    GC+ VV E    L GI TE D         K  
Sbjct: 117 KQEKQIIYVKSNNTIYDAIKLMNNHGIGCLLVVSEVDGSLVGIFTERDYLGKVALMGKSS 176

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLLR 337
               V+D M      I     +  AM+L+ +     + VVD+     IG+V   DL++
Sbjct: 177 KETLVQDAMTTKVVTINSKVGVVEAMKLMTEKRFRHIPVVDEDCINVIGLVSITDLIK 234


>gi|292493717|ref|YP_003529156.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus halophilus
           Nc4]
 gi|291582312|gb|ADE16769.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus halophilus
           Nc4]
          Length = 486

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  V     ++  +    S V+      
Sbjct: 40  NIPLASAAMDTVTEGQLAISLAQEGGIGFIHKNMSVERQAAEVRKVKKFESGVI---KEP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + + +    R   V VV EG+KL GI+T  D+    H D     V ++M 
Sbjct: 97  ITVTPDTSIEEVLALTRAHRISGVPVV-EGEKLVGIVTSRDLRFETHFD---SPVSNIMT 152

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       ++LL Q+ I  ++VVDD  +  G++   D+ + 
Sbjct: 153 PKSRLVTVPEGADRDEVVELLHQYRIEKVLVVDDQFRLRGLITVKDIQKA 202


>gi|302553615|ref|ZP_07305957.1| inosine-5'-monophosphate dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
 gi|302471233|gb|EFL34326.1| inosine-5'-monophosphate dehydrogenase [Streptomyces
           viridochromogenes DSM 40736]
          Length = 500

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       LAIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTESRLAIAMARLGGVGVLHRNLSVED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D     V
Sbjct: 101 MVTDPITVHPEATLAEADALCAKFRISGVPVTDPAGKLLGIVTNRDM--AFETD-RGRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM   P V  +       AM+LLR+H I  L +VD+     G++   D ++ 
Sbjct: 158 RDVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDEAGILKGLITVKDFVKA 211


>gi|85712714|ref|ZP_01043759.1| inositol-5-monophosphate dehydrogenase [Idiomarina baltica OS145]
 gi|85693446|gb|EAQ31399.1| inositol-5-monophosphate dehydrogenase [Idiomarina baltica OS145]
          Length = 489

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +         +  +    S ++   +  
Sbjct: 41  NIPLVSAAMDTVTEAPLAIALAQEGGLGFIHKNMTPEDQAAHVRKVKKYESGMV---NDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + +   + +E  F    V+++   L GI+T  D      +D ++  V++VM 
Sbjct: 98  VTVNPDTTIGEIKALTAEHGFQGFPVIEKNGDLVGIVTGRDTRF---EDDDSKPVKEVMS 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       +QL+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 DKSRLVTVHETAQSDEILQLMHKHRIEKILVVDDAYKLKGMITLKDFEKA 204


>gi|16330751|ref|NP_441479.1| polyA polymerase [Synechocystis sp. PCC 6803]
 gi|1653244|dbj|BAA18159.1| polyA polymerase [Synechocystis sp. PCC 6803]
          Length = 942

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 51/112 (45%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  +L       + VV++ +KL GII+  D+    H   +   V
Sbjct: 335 MSSPVRTIRPHTTIEQAQRVLFRYGHSGLTVVNQEEKLVGIISRRDLDLALHHGFSHAPV 394

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +N K I  DT L     ++   ++  L V+D  +K +GIV   D+LR
Sbjct: 395 KGYMTRNVKTIAPDTPLPRIEAIMVADDVGRLPVMD-QEKLVGIVTRTDVLR 445



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D M    + I   T +  A ++L ++  S L VV+  +K +GI+   DL
Sbjct: 331 ARDFMSSPVRTIRPHTTIEQAQRVLFRYGHSGLTVVNQEEKLVGIISRRDL 381



 Score = 39.5 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 1/73 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +   ++  +    PL     I+     G + V+D  +KL GI+T  D
Sbjct: 384 ALHHGFSHAPVKGYMTRNVKTIAPDTPLPRIEAIMVADDVGRLPVMD-QEKLVGIVTRTD 442

Query: 272 IFRNFHKDLNTLS 284
           + R   +D    S
Sbjct: 443 VLRQLLQDKQEQS 455


>gi|323490787|ref|ZP_08095989.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
 gi|323395669|gb|EGA88513.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
          Length = 282

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+S      + I   K  + S   SL  +   +   AV+ I+  + ++V  G+G S    
Sbjct: 91  KDSPYDLFHKVIQVNKSAIESCADSLDRK---ELTKAVDAIRDAR-KIVFFGVGGSSTAA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  S            +  +T  D+ + +S SG + ++  +  +A+R   
Sbjct: 147 VDAQYKFTKLGYHSITSLDFHHMLSVIPHLTEKDVFVAISTSGKTKDVLELTRFAQRKGA 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT+ +KS +   ADI L  P   +    G     S + QL + D L +++     
Sbjct: 207 TVIAITTLSKSPLYKEADIHLCTPNVEQDFRIGSL--ASRMTQLTVIDTLYLSIFHHIG 263


>gi|291618440|ref|YP_003521182.1| YfhH [Pantoea ananatis LMG 20103]
 gi|291153470|gb|ADD78054.1| YfhH [Pantoea ananatis LMG 20103]
          Length = 281

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 81/187 (43%), Gaps = 5/187 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K      + ++ +  ++     ++ EK  LS++ ++L      + +  ++ +K  + R++
Sbjct: 79  KDAITVHNQILSDDPLKAVGEKLLTEK--LSAIRATLDINSEEKLNAVLQLLKRAR-RIL 135

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + GIG SG +    +  L   G  +       A    +  ++  D+++ +S++G   E+ 
Sbjct: 136 LVGIGASGLVAKDFSWKLMKIGINAVAEQDMHALLASVQAMSSGDVLLAISYTGERREIN 195

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
                A R    ++A T    + +   A   L    E +S     A  +S   QLA+ D 
Sbjct: 196 LAAQEAVRVGADVLAFTGFTPNTLQQCATHCLYTVAEEQSTR--SAAISSTTAQLALTDL 253

Query: 189 LAIALLE 195
           L +AL++
Sbjct: 254 LFMALVQ 260


>gi|15672202|ref|NP_266376.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis Il1403]
 gi|116511049|ref|YP_808265.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|281490708|ref|YP_003352688.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis KF147]
 gi|12723077|gb|AAK04318.1|AE006260_1 IMP dehydrogenase [Lactococcus lactis subsp. lactis Il1403]
 gi|116106703|gb|ABJ71843.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris SK11]
 gi|281374477|gb|ADA63998.1| Inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis KF147]
 gi|326405799|gb|ADZ62870.1| inosine-5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           lactis CV56]
          Length = 493

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++            V+H    +         V  S   +  
Sbjct: 45  NIPIISAAMDTVTDSKMAISMARQGGLG-----VVHKNMSVEEQAEEIHKVKRSESGVIT 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +++  R   V +VD  E +KL GIIT  D+   F  D N   ++
Sbjct: 100 DPFFLTPNHKIEEAENLMATYRISGVPIVDTLENRKLVGIITNRDLR--FITDYNQ-QIK 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++M  +N       T L  A ++L++H I  L +VD+  K  G++   D+ R
Sbjct: 157 NMMTSENLITAPVGTTLDTAARILQEHKIEKLPLVDEAGKLAGLITIKDIER 208


>gi|254410111|ref|ZP_05023891.1| hypothetical protein MC7420_7869 [Microcoleus chthonoplastes PCC
           7420]
 gi|196183147|gb|EDX78131.1| hypothetical protein MC7420_7869 [Microcoleus chthonoplastes PCC
           7420]
          Length = 156

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/141 (25%), Positives = 59/141 (41%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                  V    P+ +A+ IL+E+R   + VV++  KL GII+E D+             
Sbjct: 9   MSRDPITVSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLLWQQTGVEPPVYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                              HK L   +V +VM   P V+  D  L  A +L++  ++  L
Sbjct: 69  VFLDSVIYLENPARYEEELHKALGQ-TVGEVMTHAPVVVKPDQPLRKAAKLMQDKSLRRL 127

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V D+  K IG++   D++R 
Sbjct: 128 AVTDNQGKVIGVLTAGDIVRA 148



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 33/54 (61%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V +VM ++P  +   T +  AM++L +  IS L+VV+D  K +GI+   DLL
Sbjct: 3   KTVAEVMSRDPITVSPQTPIREAMKILAERRISGLLVVNDVGKLVGIISETDLL 56



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              +  +VK   PL  A  ++ +K    +AV D   K+ G++T GDI R    +L+ 
Sbjct: 99  MTHAPVVVKPDQPLRKAAKLMQDKSLRRLAVTDNQGKVIGVLTAGDIVRAMIAELDE 155


>gi|297619556|ref|YP_003707661.1| hypothetical protein Mvol_1031 [Methanococcus voltae A3]
 gi|297378533|gb|ADI36688.1| protein of unknown function DUF39 [Methanococcus voltae A3]
          Length = 509

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/205 (18%), Positives = 72/205 (35%), Gaps = 3/205 (1%)

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            +R   P I  T+         + I L +  E           +S      I   L   +
Sbjct: 303 IQRRDKPTIGTTNYKDLRTGKIS-IELDINGEKVDKCIRTTSVSSYKTSREIAGELKDWI 361

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           +    F       L+                       + K    + +A  +L E     
Sbjct: 362 INKEFFLTERVAKLNTSAPKPMKANAKLVRDIIKRPPIVAKQTISVSEASKVLIENNINH 421

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + +VDE   + GIIT  DI +   +  +  ++ D+M +       D  + +  + +  +N
Sbjct: 422 LPIVDENDCIMGIITSWDIAKAMAQ--SKSAISDIMTRYVVWASPDEPIEMVAKKMSANN 479

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           IS L +VD+ +K +G++   D+ + 
Sbjct: 480 ISGLPIVDNNKKVLGVISAEDISKL 504


>gi|229583497|ref|YP_002841896.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228014213|gb|ACP49974.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
          Length = 142

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  +       S  +VK+G   I+A  I+ +   G V +VDE     GI TE D+ R   
Sbjct: 1   MAVTSRSLIKRSPVVVKVGTKAIEACKIMYQNNIGSVVIVDEKGYPVGIFTERDVLRAVA 60

Query: 278 KDLN-TLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              N   +VE++        +  ++ +    + + ++NI  L+VVD+  K +G+V   D+
Sbjct: 61  CGKNLNDNVENLGTFGKLITVKPNSPIGEIAEKMVKNNIRHLVVVDEEGKLVGVVSIKDI 120

Query: 336 LRFG 339
           +   
Sbjct: 121 VNEK 124



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 3/74 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D          G       + + +   +  VK   P+ +    + +     + VVD
Sbjct: 50  FTERDVLR---AVACGKNLNDNVENLGTFGKLITVKPNSPIGEIAEKMVKNNIRHLVVVD 106

Query: 259 EGQKLKGIITEGDI 272
           E  KL G+++  DI
Sbjct: 107 EEGKLVGVVSIKDI 120


>gi|157961141|ref|YP_001501175.1| inosine 5'-monophosphate dehydrogenase [Shewanella pealeana ATCC
           700345]
 gi|157846141|gb|ABV86640.1| inosine-5'-monophosphate dehydrogenase [Shewanella pealeana ATCC
           700345]
          Length = 490

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    + 
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +     F    VV+E  +L GIIT  D+   F  D +  +V+ VM 
Sbjct: 100 --VTPATTLADVKVLTERNGFAGYPVVNEANELVGIITGRDVR--FITDWSR-TVDQVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  H +  ++VVDD  K  G++   D  + 
Sbjct: 155 PKERLVTVPEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKA 204


>gi|94496911|ref|ZP_01303485.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. SKA58]
 gi|94423587|gb|EAT08614.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. SKA58]
          Length = 485

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 65/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPILSSAMDTVTEADMAIVMAQLGGIG-----VLHRNLTVEEQADAVRAVKRFESGMVV 93

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++   +   + VV+E  KL GI+T  D+   F ++   L V ++
Sbjct: 94  NPITILPTATLSDAQMLMQRHKISGIPVVEESGKLVGILTHRDVR--FAENPAQL-VSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N   +        A +LL Q  I  L+VVD+    +G++   D+ + 
Sbjct: 151 MTKDNLATVKAGVSQDEAQRLLHQRRIEKLLVVDEAYHCVGLITVKDIEKA 201


>gi|322436500|ref|YP_004218712.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX9]
 gi|321164227|gb|ADW69932.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium sp.
           MP5ACTX9]
          Length = 508

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 69/175 (39%), Gaps = 10/175 (5%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVM 224
            S      P  SA M       LAIA+ +         +  ++   G++  +    S ++
Sbjct: 36  TSRIMLNTPLMSAAMDTVTESRLAIAMAQQGGLGIIHRNLSIVQQAGEVDKVKRSESGMI 95

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   +     +  A+ ++   +   V V  + +KL GI+T  D+       +    
Sbjct: 96  ---VDPVTISPDESIAAALDVMRRYKISGVPVT-KNKKLVGILTNRDLRFV---SVTDAP 148

Query: 285 VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ VM K N   +   T L  A  +L QH +  L+VV+D  +  G++   D+ + 
Sbjct: 149 IDTVMTKTNLITVPVGTTLEEAEHILHQHRVEKLLVVNDDYELKGLITVKDIQKK 203



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 30/55 (54%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           D + +  ++  V +G  L +A  IL + R   + VV++  +LKG+IT  DI +  
Sbjct: 150 DTVMTKTNLITVPVGTTLEEAEHILHQHRVEKLLVVNDDYELKGLITVKDIQKKL 204


>gi|296283757|ref|ZP_06861755.1| IMP dehydrogenase [Citromicrobium bathyomarinum JL354]
          Length = 487

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+ +          VLH    +         V      + +
Sbjct: 42  NIPVISSAMDTVTEADMAIAMAQLGG-----MGVLHRNLDIEEQVAAVRAVKRFESGMVV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  I+S  R   + V D G KL GI+T  D+      +     + ++
Sbjct: 97  NPITIHPDATLGEAQAIMSANRISGIPVTDRGGKLVGILTNRDVRFA---ENPAQPIREL 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +   T    A + L Q  I  L+VVDD  + IG++   D+ + 
Sbjct: 154 MTTDNLATVPLGTGQEEARRTLHQRRIEKLIVVDDEYRCIGLITVKDIEKA 204


>gi|254294176|ref|YP_003060199.1| inosine-5'-monophosphate dehydrogenase [Hirschia baltica ATCC
           49814]
 gi|254042707|gb|ACT59502.1| inosine-5'-monophosphate dehydrogenase [Hirschia baltica ATCC
           49814]
          Length = 488

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
            AP  SA M       LAIA+ ++         +LH    +       + V         
Sbjct: 39  NAPVLSAAMDTVTESPLAIAMAQAGGIG-----ILHKNMTIEKQAQQVTRVKKFESGVVA 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKDLNTLSVE 286
               +     L D   I  E  F  + VV++G   K+ GIIT  D+  +   D  ++ V 
Sbjct: 94  DPVTLTPDAKLEDVKRIKEEYGFSGIPVVEKGNGGKVVGIITNRDVRFS---DDLSMPVS 150

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M      + E      A +LL QH I  L+VVDD ++ +G++   D+ + 
Sbjct: 151 ELMTTKLVTVREGVSQDDARRLLHQHRIERLIVVDDKERCVGLLTVKDMEKA 202


>gi|224539228|ref|ZP_03679767.1| hypothetical protein BACCELL_04130 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224519151|gb|EEF88256.1| hypothetical protein BACCELL_04130 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 376

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 73/173 (42%), Gaps = 4/173 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSS---LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           K   +   L  I  +   L        S +G+ S +  CA+ K      R+V TG+G S 
Sbjct: 23  KYFIMNKFLEEIQEQPEALKQTFCYYRSEEGKKSLKTVCALWK-SGEYDRIVFTGMGSSY 81

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I    A+ ++S   P+  ++A E  H     +T   L+I +S SG S E+  +L   R 
Sbjct: 82  FISQAAATMISSASIPASAINAGELLHFQSPSLTERTLLIAVSQSGESYEVIELLKKQRW 141

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             I +I IT+E+ S +A  A   L      E         T+ +    + ++L
Sbjct: 142 LPITVIGITNESGSSLAVMATHCLLCKAGKEEMTSTKTFITTYLAVYLLAESL 194



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 57/147 (38%), Gaps = 10/147 (6%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST----LASTGT 91
             L  +   ++ +L+ +       +  +KG   +  IG+ G + + +A T    + +T  
Sbjct: 202 EALDGIIREVERQLAERDTYLSRSLTFLKGHSFVQVIGR-GTVFAAVAQTALMFMEATKI 260

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVL--SWSGSSDELKAILYYARRFSIPLIAITSENK 149
           P+  +   E  HG L M+  D + IV   S SG+      ++     F   +I I+    
Sbjct: 261 PASALLGGEFRHGPLEMVGPDFICIVYAHSQSGAYHPSIRLVEDVLSFKGKVILISDAAS 320

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPT 176
            +    +  +L +    E       P+
Sbjct: 321 GI---ESPDLLEVHVRCERSDLFAIPS 344


>gi|257463998|ref|ZP_05628383.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
          Length = 486

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NVPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     ++ A  I+   +   + V++E  KL GIIT  DI   + KD+N L V D+M 
Sbjct: 99  ITLNQESTVMQAEEIMRRYKISGLPVIEEDGKLIGIITNRDIK--YRKDMNQL-VGDIMT 155

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K         T L  A ++L  + I  L + D+     G++   D+
Sbjct: 156 KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 201


>gi|125623107|ref|YP_001031590.1| inositol-5-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124491915|emb|CAL96836.1| inositol-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300069854|gb|ADJ59254.1| inosine 5'-monophosphate dehydrogenase [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 493

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 69/172 (40%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++            V+H    +         V  S   +  
Sbjct: 45  NIPIISAAMDTVTDSKMAISMARQGGLG-----VVHKNMSVEEQAEEIHKVKRSESGVIT 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +++  R   V +VD  E +KL GIIT  D+   F  D N   ++
Sbjct: 100 DPFFLTPNHKIEEAENLMATYRISGVPIVDTLENRKLVGIITNRDLR--FITDYNQ-QIK 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++M  +N       T L  A ++L++H I  L +VD+  K  G++   D+ R
Sbjct: 157 NMMTSENLITAPVGTTLDTAARILQEHKIEKLPLVDEAGKLAGLITIKDIER 208


>gi|322388469|ref|ZP_08062072.1| inosine-5'-monophosphate dehydrogenase [Streptococcus infantis ATCC
           700779]
 gi|321140782|gb|EFX36284.1| inosine-5'-monophosphate dehydrogenase [Streptococcus infantis ATCC
           700779]
          Length = 492

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   + VV+  E +KL GI+T  D+   F  D N    +
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGIPVVETLENRKLVGILTNRDLR--FISDYNQPISK 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSENLVTAPVGTDLKTAESILQEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|109899425|ref|YP_662680.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas atlantica
           T6c]
 gi|109701706|gb|ABG41626.1| inosine-5'-monophosphate dehydrogenase [Pseudoalteromonas atlantica
           T6c]
          Length = 489

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +           +H      T       V         
Sbjct: 41  NIPLISAAMDTVSEARLAIALAQEGGIG-----FIHKNMPAETQADHVRMVKKYESGVVS 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   +     F    VVD+   L GI+T  D+     ++     +  V
Sbjct: 96  DPVTVSPNATIGEINALSKHHGFSGFPVVDKDNALVGIVTGRDLRF---ENRLDQPISSV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +  +   + E       ++L+ +H I  ++VVDD  +  G++   D  + 
Sbjct: 153 MTRKDDLVTVKEGADSDQVLELMHEHRIEKILVVDDAFRLTGLITVKDFQKA 204


>gi|327311265|ref|YP_004338162.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947744|gb|AEA12850.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 291

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 52/121 (42%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                             +   PL   I +LS++R+  + VVDE  +  G++    +   
Sbjct: 161 SIPHVPVSEIMTRKPVTARPDDPLDKYIDVLSKRRYRGIPVVDEQGRPVGLLMSSRVVEA 220

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +    + V DVMI NP VI     +   +  +  +NI  L+VVDD  K +GIV   D+
Sbjct: 221 LARCAGNIKVGDVMILNPPVINASDDIYDVIGAMLANNIGRLLVVDDEGKLVGIVTRTDI 280

Query: 336 L 336
           L
Sbjct: 281 L 281



 Score = 43.0 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 23/66 (34%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L               + P++     + D I  +     G + VVD+  KL GI+T  D
Sbjct: 220 ALARCAGNIKVGDVMILNPPVINASDDIYDVIGAMLANNIGRLLVVDDEGKLVGIVTRTD 279

Query: 272 IFRNFH 277
           I     
Sbjct: 280 ILSRIA 285


>gi|294780823|ref|ZP_06746178.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           PC1.1]
 gi|307270808|ref|ZP_07552097.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|294452068|gb|EFG20515.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           PC1.1]
 gi|306512840|gb|EFM81483.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|323481422|gb|ADX80861.1| helix-turn-helix domain, RpiR family protein [Enterococcus faecalis
           62]
 gi|329572208|gb|EGG53868.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1467]
          Length = 282

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT +  SV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDENSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|257055770|ref|YP_003133602.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Saccharomonospora viridis DSM 43017]
 gi|256585642|gb|ACU96775.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Saccharomonospora viridis DSM 43017]
          Length = 191

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-----DL 280
               +  +    PL DA+  L+E  F  + VVDE Q++ G+ITE D  R   +       
Sbjct: 7   MSRPVVTISPDAPLRDAVVKLTEGGFASLPVVDEDQQVIGMITEVDALRAAEQINDGEGP 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L V DVM K  +V+  DT +T    L+    +  L VV +    +GIV   D+LR
Sbjct: 67  PALKVSDVMTKPVEVVSPDTNITDVAHLMLTDRLRSLPVV-ENGVLVGIVSRRDVLR 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ++M +    I  D  L  A+  L +   + L VVD+ Q+ IG++  +D LR 
Sbjct: 3   ASEIMSRPVVTISPDAPLRDAVVKLTEGGFASLPVVDEDQQVIGMITEVDALRA 56



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 3/65 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
               + +V     + D   ++   R   + VV E   L GI++  D+ R   +  D+   
Sbjct: 75  MTKPVEVVSPDTNITDVAHLMLTDRLRSLPVV-ENGVLVGIVSRRDVLRPLVRPDDVVAT 133

Query: 284 SVEDV 288
            V  V
Sbjct: 134 HVASV 138


>gi|294782944|ref|ZP_06748270.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp.
           1_1_41FAA]
 gi|294481585|gb|EFG29360.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp.
           1_1_41FAA]
          Length = 488

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 65/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI   + KDL+   V D+M 
Sbjct: 100 ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIK--YRKDLDQ-PVGDIMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 157 SKGLITAPVGTNLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|238762802|ref|ZP_04623771.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           kristensenii ATCC 33638]
 gi|238699107|gb|EEP91855.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           kristensenii ATCC 33638]
          Length = 280

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 84/181 (46%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     ++AEK  +++L ++L      +   A+  ++A + R+++TG+G S
Sbjct: 85  NQILSTDSLKTVGEKLLAEK--VAALRATLDINSEQRLAEALAMLRAAR-RIILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++ +S+SG   EL      A+
Sbjct: 142 GLVAKDLAHKLLKIGVMAVSETDMHAQLAAVQTLDTRDLLLAISFSGERRELNLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPAIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 S 196
            
Sbjct: 260 Q 260


>gi|78356516|ref|YP_387965.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
 gi|78218921|gb|ABB38270.1| inosine-5'-monophosphate dehydrogenase [Desulfovibrio desulfuricans
           subsp. desulfuricans str. G20]
          Length = 485

 Score = 92.3 bits (228), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AI++  +         V+H    +    +    V  S   + +
Sbjct: 41  NIPLISAAMDTVTESAMAISMARNGGVG-----VIHKNMTIDEQRLEIEKVKKSESGMII 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ I+ E R   + VV +  +L GI+T  D+   F  DL    V +V
Sbjct: 96  DPVTIAPDYTVAQALQIMREYRVSGLPVV-KDAELVGILTNRDVR--FVTDLEGTRVHEV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +    +   T L  A   L +H I  L+VVD+  +  G++   D+
Sbjct: 153 MTSEELVTVPVGTTLDEARHHLHEHRIEKLLVVDENNRLKGLITMKDI 200


>gi|330505788|ref|YP_004382657.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328920074|gb|AEB60905.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 639

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 61/148 (41%), Gaps = 21/148 (14%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------- 258
            G     + +    ++  G S   V +  P+     ++SE+    V +V+          
Sbjct: 142 HGKASELMKIKVRKLI--GRSPVSVPLDMPVQQVAKVMSEQSVSSVIIVNPGRRWPNPAQ 199

Query: 259 ------EGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                 + Q + GI+T+ D+  R   + L     V  VM   P  +  D  +  AM  + 
Sbjct: 200 VQVADQQNQVMAGILTDRDLRTRVLAEGLPGDTPVSQVMTPGPVTVQADESVFEAMLCML 259

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++NI  L V+   ++ +G++   D++R+
Sbjct: 260 RNNIHHLPVL-QRRRPVGMISLADVIRY 286


>gi|307294659|ref|ZP_07574501.1| inosine-5'-monophosphate dehydrogenase [Sphingobium
           chlorophenolicum L-1]
 gi|306879133|gb|EFN10351.1| inosine-5'-monophosphate dehydrogenase [Sphingobium
           chlorophenolicum L-1]
          Length = 485

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPVLSSAMDTVTEADMAIVMAQLGGIG-----VLHRNLSVEEQADAVRAVKRFESGMVV 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +  G  L DA  +++  +   + VV+   KL GI+T  D+      +     V ++
Sbjct: 94  NPITITPGATLADAQMLMARHKISGIPVVEASGKLVGIVTNRDVRFA---ENPAQPVSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +        AM+LL Q  I  L+VVDD    +G++   D+ + 
Sbjct: 151 MTHDNLATVKTGVGQEEAMRLLHQRRIEKLLVVDDHYHCVGLITVKDIEKA 201


>gi|183602497|ref|ZP_02963862.1| Inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219683540|ref|YP_002469923.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis AD011]
 gi|183218138|gb|EDT88784.1| Inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis HN019]
 gi|219621190|gb|ACL29347.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis AD011]
          Length = 511

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 55  KVPVLSAAMDTVTEADMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 109

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD   KL GIIT  D+     +D + L V+DV
Sbjct: 110 DPLTVNPDATLADLDKLCGKFHISGLPVVDHDNKLVGIITNRDMRFIASEDYDHLRVKDV 169

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      D     A  LL ++ I  L +VD      G++   D ++
Sbjct: 170 MTKENLVTGPSDISKKDAHDLLAKNKIEKLPLVDGEGHLTGLITVKDFVK 219


>gi|330835690|ref|YP_004410418.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567829|gb|AEB95934.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 128

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 2/104 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
              L +   +++ K  G + V  E  K  GIITE D+ R    D +       +M  +  
Sbjct: 19  NVTLREVTKMMTMKNVGSIIVT-ESGKPIGIITERDVVRAIGNDKSLDEKAGVIMTSSLI 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ED+ +T A+ L+R +NI  L VV+   K  GI+   D+ R 
Sbjct: 78  TVREDSPITGALSLMRTYNIRHLPVVNQEGKLTGIISIRDIARA 121



 Score = 41.4 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V+   P+  A++++       + VV++  KL GII+  DI R       +
Sbjct: 79  VREDSPITGALSLMRTYNIRHLPVVNQEGKLTGIISIRDIARALDDMFES 128



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M  +   + ++  L    +++   N+  ++V  +  K IGI+   D++R 
Sbjct: 5   VKDYMKTDVVSMEKNVTLREVTKMMTMKNVGSIIVT-ESGKPIGIITERDVVRA 57


>gi|328952018|ref|YP_004369352.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452342|gb|AEB08171.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 222

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     ++ A+ ++ E +   + V+    KL GII++ D+                +  L
Sbjct: 14  VDENTSMMKALHLMKENKIRRLPVM-SHGKLVGIISDRDLKEASPSKATTLDVHELYYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + ++++M KNP  I  D  +  A  ++ ++ +S L VV+   + +GIV   D+ R 
Sbjct: 73  AEIKIKEIMTKNPITIQPDETIERAAVVMLENKVSGLPVVNGKSELVGIVTQSDIFRA 130



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + M  +   + E+T +  A+ L++++ I  L V+    K +GI+   DL   
Sbjct: 3   IREWMATDVLTVDENTSMMKALHLMKENKIRRLPVM-SHGKLVGIISDRDLKEA 55



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   ++    +  A  ++ E +   + VV+   +L GI+T+ DIFR F
Sbjct: 81  MTKNPITIQPDETIERAAVVMLENKVSGLPVVNGKSELVGIVTQSDIFRAF 131


>gi|283786177|ref|YP_003366042.1| RpiR-family transcriptional regulator [Citrobacter rodentium
           ICC168]
 gi|282949631|emb|CBG89250.1| RpiR-family transcriptional regulator [Citrobacter rodentium
           ICC168]
          Length = 282

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  ++++ ++L      +   +V  +++ + R+V+TGIG SG +    A  L   G  + 
Sbjct: 104 QENVAAMHATLDVNSEEKLTESVTLLRSAR-RIVLTGIGASGLVAQNFAWKLLKIGVNAT 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +T DDL++ +S+SG   EL        R    ++AIT    + +  
Sbjct: 163 VERDMHALLATVQALTPDDLLLAISYSGERRELNLAADETLRVGARILAITGFTPNGLQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S+  Q  + D L +AL++ 
Sbjct: 223 RASHCLYTIAEEQATR--SAAISSSHAQTLLTDLLFMALVQQ 262


>gi|257079665|ref|ZP_05574026.1| transcriptional regulator [Enterococcus faecalis JH1]
 gi|256987695|gb|EEU74997.1| transcriptional regulator [Enterococcus faecalis JH1]
          Length = 284

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 103 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 161

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT +  SV+ 
Sbjct: 162 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDENSVIG 221

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 222 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 267


>gi|167629802|ref|YP_001680301.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
 gi|167592542|gb|ABZ84290.1| cbs domain protein [Heliobacterium modesticaldum Ice1]
          Length = 129

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 3/104 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPK 294
            P+ DA+ +++EK    + V+D+ ++L GI+   DI +       +    VE VM KNP 
Sbjct: 18  TPIRDALRMMTEKNIRRLPVIDDKERLVGIVAFHDIDKAMRSPGVIPLTPVEWVMTKNPV 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     L  +++++R++ +S L VV   +K +GI+   D+L+ 
Sbjct: 78  YVEATMPLADSVRMMRRYKVSCLPVV-AGEKVVGILSVSDILQL 120



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF----GI 340
           V D M+         T +  A++++ + NI  L V+DD ++ +GIV F D+ +     G+
Sbjct: 3   VRDKMVTPVITTGIFTPIRDALRMMTEKNIRRLPVIDDKERLVGIVAFHDIDKAMRSPGV 62

Query: 341 I 341
           I
Sbjct: 63  I 63


>gi|159041176|ref|YP_001540428.1| signal transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920011|gb|ABW01438.1| putative signal transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 145

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +           +  V    P+ +A  +++    G + VV    ++ G+++E DI R   
Sbjct: 1   MSVKINQLMRSGVISVDAATPIKEAAKVMTRNNVG-LLVVMSNGRMTGVVSEKDIVRAVA 59

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +N +  +E +  K+   +  ++ L  A +L+ + NI  L+VVDD    +G+V   D++
Sbjct: 60  NGVNPSDPIEKITTKSVISVNHESSLHEAAELMHKLNIRHLVVVDDNNNPVGVVSIRDIV 119

Query: 337 RFGI 340
              I
Sbjct: 120 GESI 123


>gi|159039746|ref|YP_001538999.1| inosine-5'-monophosphate dehydrogenase [Salinispora arenicola
           CNS-205]
 gi|157918581|gb|ABW00009.1| inosine-5'-monophosphate dehydrogenase [Salinispora arenicola
           CNS-205]
          Length = 520

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    +    +    V  S   +  
Sbjct: 69  NIPLLSSAMDTVTEGRMAIAMARQGGIG-----VLHRNLSVEDQALQVDLVKRSESGMIT 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L D  ++  + R   V VVD   +L GI+T  D+            V ++
Sbjct: 124 NPVTAGPDDTLQDVDSLCGQYRISGVPVVDGDGQLVGIVTNRDMRFVSDP---ATPVREI 180

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P V          A+ LLRQH +  L +VD   K  G++   D  +
Sbjct: 181 MTRTPLVTAPVGVSKEDALGLLRQHKVEKLPIVDGAGKLRGLITVKDFTK 230



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 44/113 (38%), Gaps = 15/113 (13%)

Query: 230 IPLVKIGCPL-IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              V++  PL   A+  ++E R         G    G+     + RN   +   L V+ V
Sbjct: 63  TRTVELNIPLLSSAMDTVTEGRMAIAMARQGG---IGV-----LHRNLSVEDQALQVDLV 114

Query: 289 ------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 MI NP     D  L     L  Q+ IS + VVD   + +GIV   D+
Sbjct: 115 KRSESGMITNPVTAGPDDTLQDVDSLCGQYRISGVPVVDGDGQLVGIVTNRDM 167


>gi|317061520|ref|ZP_07926005.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
 gi|313687196|gb|EFS24031.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D12]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NVPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     ++ A  I+   +   + V++E  KL GIIT  DI   + KD+N L V D+M 
Sbjct: 100 ITLNQESTVMQAEEIMRRYKISGLPVIEEDGKLIGIITNRDIK--YRKDMNQL-VGDIMT 156

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K         T L  A ++L  + I  L + D+     G++   D+
Sbjct: 157 KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 202


>gi|302549200|ref|ZP_07301542.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302466818|gb|EFL29911.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 234

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 25/127 (19%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------FRNFHKDLNT 282
           G P  +   +L+E R   + VVD+ +K+ G+I+E D+              R F +   T
Sbjct: 11  GTPFKEVARLLAEHRISGLPVVDDDEKVLGVISETDLMARQAEAPGPSGPRRLFRRPRWT 70

Query: 283 L------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                        +   +M +    +  D     A +++  H +  L VVDD ++ +GIV
Sbjct: 71  PGSRARQARAHARTAGQLMSRPAITVHGDASAVEAARVMAHHRVERLPVVDDEERLVGIV 130

Query: 331 HFLDLLR 337
              DLL+
Sbjct: 131 TRRDLLQ 137



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +       T      +LL +H IS L VVDD +K +G++   DL+
Sbjct: 1   MAADVVRAGYGTPFKEVARLLAEHRISGLPVVDDDEKVLGVISETDLM 48



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 48/134 (35%), Gaps = 8/134 (5%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
            E   ++A H    L +  + +    G+   T  + + A     +      R F      
Sbjct: 15  KEVARLLAEHRISGLPV-VDDDEKVLGVISETDLMARQAEAPGPS---GPRRLFRRP--- 67

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              PG +       A           + V      ++A  +++  R   + VVD+ ++L 
Sbjct: 68  RWTPGSRARQARAHARTAGQLMSRPAITVHGDASAVEAARVMAHHRVERLPVVDDEERLV 127

Query: 265 GIITEGDIFRNFHK 278
           GI+T  D+ + F +
Sbjct: 128 GIVTRRDLLQVFLR 141


>gi|254383108|ref|ZP_04998462.1| inosine 5' monophosphate dehydrogenase [Streptomyces sp. Mg1]
 gi|194342007|gb|EDX22973.1| inosine 5' monophosphate dehydrogenase [Streptomyces sp. Mg1]
          Length = 502

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 66/189 (34%), Gaps = 13/189 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            +   +              P  SA M       +AIA+            VLH    + 
Sbjct: 32  MSPDAIDTSSLISRNVRVNVPLLSAAMDKVTEARMAIAMARQGGVG-----VLHRNLSIA 86

Query: 215 TLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S          V     L +A  + ++ R   V V D   KL GI+T  
Sbjct: 87  DQANQVDLVKRSESGMVTDPITVHPDATLREADELCAKFRISGVPVTDAAGKLLGIVTNR 146

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D  +  V +VM   P V  +       AM+LLR+H I  L +VD+     G+
Sbjct: 147 DM--AFESD-RSRQVREVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDEAGLLKGL 203

Query: 330 VHFLDLLRF 338
           +   D ++ 
Sbjct: 204 ITVKDFVKA 212


>gi|154486895|ref|ZP_02028302.1| hypothetical protein BIFADO_00728 [Bifidobacterium adolescentis
           L2-32]
 gi|154084758|gb|EDN83803.1| hypothetical protein BIFADO_00728 [Bifidobacterium adolescentis
           L2-32]
          Length = 508

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S +D        +   + +       
Sbjct: 51  KVPAISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 102

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L D   +        + VVD+  KL GIIT  D+     +D + L V
Sbjct: 103 MISDPLTVSPDVTLADLDKLCGRFHISGLPVVDKDSKLVGIITNRDMRFIASEDYDRLKV 162

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM + N      D     A  LL +H +  L +VD   +  G++   D ++
Sbjct: 163 SEVMTRENLITGPSDISKEDAHDLLAKHKVEKLPLVDSEGRLTGLITVKDFVK 215


>gi|257453236|ref|ZP_05618535.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|257467173|ref|ZP_05631484.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 486

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NVPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     ++ A  I+   +   + V++E  KL GIIT  DI   + KD+N L V ++M 
Sbjct: 99  ITLNQESTVMQAEEIMRRYKISGLPVIEEDGKLIGIITNRDIK--YRKDMNQL-VGEIMT 155

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K         T L  A ++L  + I  L + D+     G++   D+
Sbjct: 156 KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 201


>gi|269955495|ref|YP_003325284.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
           DSM 15894]
 gi|269304176|gb|ACZ29726.1| inosine-5'-monophosphate dehydrogenase [Xylanimonas cellulosilytica
           DSM 15894]
          Length = 501

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D            + +       
Sbjct: 45  RVPLVSAAMDTVTEARMAIAMARQGGIGVLHRNLSTEDQAR--------QVDLVKRTQTG 96

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D+   +     L +   +  E R     VVD G +L GI+T  D+      +  T +V
Sbjct: 97  IIDNPITIGQDATLEELDRLAGEYRISGFPVVDAGGRLIGIVTNRDLRFTPVAEWATTTV 156

Query: 286 EDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM   P +    T+    A  LLR+H +  L +VD   +  G++   D ++
Sbjct: 157 ADVMTPAPLITGPSTISREEATLLLRKHKLERLPLVDADGRLAGLITVKDFVK 209


>gi|227519849|ref|ZP_03949898.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX0104]
 gi|229545146|ref|ZP_04433871.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX1322]
 gi|293383557|ref|ZP_06629467.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|293387330|ref|ZP_06631886.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|300861165|ref|ZP_07107252.1| transcriptional regulator, RpiR family [Enterococcus faecalis TUSoD
           Ef11]
 gi|307277132|ref|ZP_07558236.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|307287687|ref|ZP_07567730.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|312899864|ref|ZP_07759182.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0470]
 gi|312906107|ref|ZP_07765119.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           512]
 gi|312909453|ref|ZP_07768308.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           516]
 gi|227072643|gb|EEI10606.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX0104]
 gi|229309691|gb|EEN75678.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis TX1322]
 gi|291079069|gb|EFE16433.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|291083228|gb|EFE20191.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|300850204|gb|EFK77954.1| transcriptional regulator, RpiR family [Enterococcus faecalis TUSoD
           Ef11]
 gi|306501425|gb|EFM70728.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|306506062|gb|EFM75228.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|310627753|gb|EFQ11036.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           512]
 gi|311290126|gb|EFQ68682.1| transcriptional regulator, RpiR family [Enterococcus faecalis DAPTO
           516]
 gi|311292860|gb|EFQ71416.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0470]
 gi|315025379|gb|EFT37311.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2137]
 gi|315032927|gb|EFT44859.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0017]
 gi|315035589|gb|EFT47521.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0027]
 gi|315144782|gb|EFT88798.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2141]
 gi|315150128|gb|EFT94144.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0012]
 gi|315155367|gb|EFT99383.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0043]
 gi|315164856|gb|EFU08873.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1302]
 gi|315579077|gb|EFU91268.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0630]
 gi|327535718|gb|AEA94552.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis OG1RF]
          Length = 282

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|330806493|ref|XP_003291203.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
 gi|325078625|gb|EGC32266.1| hypothetical protein DICPUDRAFT_95316 [Dictyostelium purpureum]
          Length = 147

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 13/128 (10%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---- 277
             + +   +  + +   L  A+  L+      + VVD    LKGI+T+ D+         
Sbjct: 6   RQLMTSKCLYTISMDSTLDVALKSLNANSIHRLPVVDNDGNLKGIVTDRDLRLATDSPFI 65

Query: 278 ---------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                    + L    V  +M +NP  I + + +  A +L+R  N+  L VVD   K IG
Sbjct: 66  QFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVDAAKLMRVSNVGGLPVVDKNGKLIG 125

Query: 329 IVHFLDLL 336
           +V   DLL
Sbjct: 126 MVTRSDLL 133



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 30/79 (37%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++ F       +                +   ++   P++DA  ++     G + VVD+
Sbjct: 60  TDSPFIQFETNEERMEKLKQHKVSSIMKQNPVTIEDYSPVVDAAKLMRVSNVGGLPVVDK 119

Query: 260 GQKLKGIITEGDIFRNFHK 278
             KL G++T  D+     K
Sbjct: 120 NGKLIGMVTRSDLLDCLIK 138


>gi|296116325|ref|ZP_06834941.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter hansenii
           ATCC 23769]
 gi|295977144|gb|EFG83906.1| inosine-5'-monophosphate dehydrogenase [Gluconacetobacter hansenii
           ATCC 23769]
          Length = 500

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIA+ ++         V+H    +         V      + +
Sbjct: 53  NIPLVSSAMDTVTEDNMAIAMAQNGGLG-----VIHKNLTIEQQAEQVRRVKRFESGMVV 107

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     L +   I+S      + VV+ +  +L GI+T  D+            V +
Sbjct: 108 NPVTVFPDQTLAEVNAIMSRHGISGLPVVERDTTRLVGILTNRDVRFATDPGQR---VYE 164

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   + +D     A QLL +H I  L+V+DD  + +G++   D+ + 
Sbjct: 165 LMTRENLVTVRQDVAREQARQLLHRHRIEKLLVIDDEDRCVGLITVKDMDKA 216


>gi|240102787|ref|YP_002959096.1| hypothetical protein TGAM_0730 [Thermococcus gammatolerans EJ3]
 gi|239910341|gb|ACS33232.1| Conserved hypothetical protein, Inosine-5'P dehydrogenase related
           protein [Thermococcus gammatolerans EJ3]
          Length = 390

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 17/150 (11%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           ND  +L    +         + M     +  +K    +  A+  + +     + +VDE  
Sbjct: 114 NDIALLERVSEGDFGKRKVEEFM--TKDVITLKPDDTVAKALATMRDYAISRIPIVDEEG 171

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVE---------------DVMIKNPKVILEDTLLTVAM 306
           +L+G++T  D+   F K                       DVMIK    IL D  +  A+
Sbjct: 172 RLEGLVTLHDLIIRFIKPRFRAQAGELAGEKIPPFSMPLRDVMIKGVITILPDAKVREAV 231

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +R ++I  L+VV++  K +G++   DLL
Sbjct: 232 ATMRDNDIDGLIVVNEDNKVVGVLTVKDLL 261



 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V       P++K    L  A  ++ E     + V +   ++ G+I +  +  R  
Sbjct: 64  PTKAKVRDVYKPAPVIKPDEDLSKAAKLMMEVDLRSLPVGESKAEIIGVINDIALLERVS 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D     VE+ M K+   +  D  +  A+  +R + IS + +VD+  +  G+V   DL+
Sbjct: 124 EGDFGKRKVEEFMTKDVITLKPDDTVAKALATMRDYAISRIPIVDEEGRLEGLVTLHDLI 183



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHK 278
                   D    + I  PL +AI I  ++    + V D G   KG++T +  I  +   
Sbjct: 4   IQVQEVMTDRFEKIDIDAPLSEAIGIFEKEDPDLILVFD-GNLYKGVLTQDLIIRSHLKW 62

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           D     V DV    P VI  D  L+ A +L+ + ++  L V +   + IG+++
Sbjct: 63  DPTKAKVRDVYKPAP-VIKPDEDLSKAAKLMMEVDLRSLPVGESKAEIIGVIN 114


>gi|226941544|ref|YP_002796618.1| GuaB [Laribacter hongkongensis HLHK9]
 gi|226716471|gb|ACO75609.1| GuaB [Laribacter hongkongensis HLHK9]
          Length = 486

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          +LH            S V         
Sbjct: 40  NLPLVSAAMDTVTEARLAIALAQEGGIG-----ILHKNMSAQKQAAEVSKVKRHESGIVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +K    + D I +  E +   + V+ E  ++ GI+T  DI     ++     V D+
Sbjct: 95  DPVTIKPDMLVRDVIRLSRENKISGLPVM-ENGRVVGIVTNRDIRF---ENRLDTPVRDI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A +L+  H +  ++VV+D  +  G++   D+++
Sbjct: 151 MTPRERLVTVREGASLEEARELMHAHKLERVLVVNDAFELKGLITVKDIIK 201



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 31/61 (50%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             D+M   + +  V+ G  L +A  ++   +   V VV++  +LKG+IT  DI +   K 
Sbjct: 147 VRDIMTPRERLVTVREGASLEEARELMHAHKLERVLVVNDAFELKGLITVKDIIKTSEKP 206

Query: 280 L 280
           L
Sbjct: 207 L 207


>gi|254500650|ref|ZP_05112801.1| inosine-5'-monophosphate dehydrogenase [Labrenzia alexandrii
           DFL-11]
 gi|222436721|gb|EEE43400.1| inosine-5'-monophosphate dehydrogenase [Labrenzia alexandrii
           DFL-11]
          Length = 502

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 14/175 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++        +      +                  PL
Sbjct: 48  NIPILSSAMDTVTEGRLAIAMAQAGGIG--VIHRNLSLDQQAEEVRMVKKFESGMVVNPL 105

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLS 284
           V      L DA+ ++       V VV+ G        KL GI+T  D+    + D     
Sbjct: 106 VIGPDASLQDALDLMKRFGISGVPVVENGGAGGQVTGKLVGILTNRDVRFASNPD---QK 162

Query: 285 VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++M   N   + E+     A +LL Q+ I  L+VVDD     G++   D+ + 
Sbjct: 163 IRELMTSSNLVTVNENVKQDEAKRLLHQNRIEKLLVVDDAGNCTGLITVKDMEKA 217


>gi|163938021|ref|YP_001642905.1| inositol-5-monophosphate dehydrogenase [Bacillus weihenstephanensis
           KBAB4]
 gi|163860218|gb|ABY41277.1| inosine-5'-monophosphate dehydrogenase [Bacillus weihenstephanensis
           KBAB4]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|302541614|ref|ZP_07293956.1| CBS domains protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302459232|gb|EFL22325.1| CBS domains protein [Streptomyces himastatinicus ATCC 53653]
          Length = 126

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVED--VM 289
           V+    L++A  ++  +  G V V     +L G++T+ DI  R     ++ L+V    V 
Sbjct: 16  VRPDASLVEAAQLMRAEDIGGVLV-ALDGELLGVLTDRDITLRAVADGVDPLTVSCHLVC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             NP  I  D  +  A  L+R+H +  L V+    + +G+V   DL + G
Sbjct: 75  TPNPVTIGPDEEVAEAAALMRKHEVRRLPVI-RSGRPVGVVSMGDLEQGG 123



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           V+DVM      +  D  L  A QL+R  +I  ++V     + +G++   D+ LR 
Sbjct: 5   VKDVMTPAVTSVRPDASLVEAAQLMRAEDIGGVLVA-LDGELLGVLTDRDITLRA 58


>gi|239997020|ref|ZP_04717544.1| inosine 5'-monophosphate dehydrogenase [Alteromonas macleodii ATCC
           27126]
          Length = 489

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +         +  +    S V+      
Sbjct: 41  NIPMVSAAMDTVSEARLAIALAQEGGIGFIHKNMKPEEQAKHVREVKKYESGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + + I +     +    V D+   L GI+T  D+   F K LN L + +VM 
Sbjct: 98  VTVEENATIGEVIALSKRLGYSGFPVTDKDNNLIGIVTGRDLR--FEKRLN-LPIRNVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E     V + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 GKDDLVTVKEGASSDVVLDLMHEHRIEKILVVDDAFKLTGLITVKDFQKA 204


>gi|256617010|ref|ZP_05473856.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256956711|ref|ZP_05560882.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|256961272|ref|ZP_05565443.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|257081988|ref|ZP_05576349.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis E1Sol]
 gi|257084540|ref|ZP_05578901.1| RpiR family phosphosugar-binding transcriptional protein
           [Enterococcus faecalis Fly1]
 gi|257087464|ref|ZP_05581825.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|257090623|ref|ZP_05584984.1| predicted protein [Enterococcus faecalis CH188]
 gi|257421925|ref|ZP_05598915.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|256596537|gb|EEU15713.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256947207|gb|EEU63839.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|256951768|gb|EEU68400.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|256990018|gb|EEU77320.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis E1Sol]
 gi|256992570|gb|EEU79872.1| RpiR family phosphosugar-binding transcriptional protein
           [Enterococcus faecalis Fly1]
 gi|256995494|gb|EEU82796.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|256999435|gb|EEU85955.1| predicted protein [Enterococcus faecalis CH188]
 gi|257163749|gb|EEU93709.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
          Length = 284

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 103 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 161

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 162 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIG 221

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 222 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 267


>gi|229133096|ref|ZP_04261932.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|228650305|gb|EEL06304.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST196]
          Length = 284

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 73/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H           ++++ V  A +   +    ++ L+ +L          AV  +   K R
Sbjct: 80  HTPMQNIHEEVSVEDNIVTVAKKVFHSH---ITGLQDTLHLLNDNALEQAVSALNEAK-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T+  ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKKAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  A I L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYQKSALSQLAHITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|259048089|ref|ZP_05738490.1| inosine-5'-monophosphate dehydrogenase [Granulicatella adiacens
           ATCC 49175]
 gi|259035150|gb|EEW36405.1| inosine-5'-monophosphate dehydrogenase [Granulicatella adiacens
           ATCC 49175]
          Length = 492

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLRVQLAKNIRLNIPLISASMDTVTDATMAIAIARQGGLG-----VIHKNMSIAEQAEE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   + +          + DA  ++++ R   V +VD  E + L GI+T  D+ 
Sbjct: 87  VHKVKRSESGVIINPFFLTPSHKVQDAEDLMAKYRISGVPIVDDLETRHLVGILTNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D + L +++VM K +       T L  A  +L++H I  L +VDD     G++  
Sbjct: 147 --FISDYSIL-IDEVMTKEHLVTAPVGTSLKDAEAILQKHKIEKLPLVDDKGCLAGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|302558921|ref|ZP_07311263.1| inosine-5'-monophosphate dehydrogenase [Streptomyces griseoflavus
           Tu4000]
 gi|302476539|gb|EFL39632.1| inosine-5'-monophosphate dehydrogenase [Streptomyces griseoflavus
           Tu4000]
          Length = 502

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 45/189 (23%), Positives = 67/189 (35%), Gaps = 13/189 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            A   +              P  SA M       +AIA+            VLH    + 
Sbjct: 31  MAPDQIDTASYVSRNVRVNIPLLSAAMDKVTESRMAIAMARQGGVG-----VLHRNLSIE 85

Query: 215 TLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S          +     L +A  + ++ R   V V D  ++L GI+T  
Sbjct: 86  GQANQVDLVKRSESGMVTDPITIHPDATLAEADALCAKFRISGVPVTDGNKRLLGIVTNR 145

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F  D  T  V +VM   P V  +       AM+LLR+H I  L +VDD     G+
Sbjct: 146 DM--AFETD-RTRQVREVMTPMPLVTGKVGISGPEAMELLRRHKIEKLPLVDDAGVLKGL 202

Query: 330 VHFLDLLRF 338
           +   D ++ 
Sbjct: 203 ITVKDFVKA 211


>gi|306835321|ref|ZP_07468347.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium accolens
           ATCC 49726]
 gi|304568800|gb|EFM44339.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium accolens
           ATCC 49726]
          Length = 506

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       +AIA+            VLH              V  S   +   
Sbjct: 54  VPLASAAMDTVTEARMAIAMARQGGIG-----VLHRNLSAEAQAEQVEIVKRSESGMVTD 108

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                    + +   + +  R   + VVD+   L GI T  D+   F  D +   V DVM
Sbjct: 109 PVTAHPEMTIGEVDALCARFRISGLPVVDKDGTLLGICTNRDMR--FEPDFDR-KVSDVM 165

Query: 290 IKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P V+  E      A++LL  + +  L +VD   K IG++   D ++
Sbjct: 166 TAMPLVVAREGVSKDEALELLSANKVEKLPIVDANNKLIGLITVKDFVK 214


>gi|296123742|ref|YP_003631520.1| inosine-5'-monophosphate dehydrogenase [Planctomyces limnophilus
           DSM 3776]
 gi|296016082|gb|ADG69321.1| inosine-5'-monophosphate dehydrogenase [Planctomyces limnophilus
           DSM 3776]
          Length = 498

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 70/168 (41%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+ +          ++H    +    +    V  S   + +
Sbjct: 42  NVPIVSSPMDTVTESDMAIAMAQEGG-----MGIIHKNLSIEQQALHVERVKRSEHGVIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +      + A  I+ ++  G V V  +  +LKGI+T  D+     KD     + +V
Sbjct: 97  DPVTLPPEATALAAWEIMEQRNIGGVPVT-QNGRLKGILTRRDLRFLASKD---TPISEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     E+T L  A ++L ++ +  L++VDD  +  G++   D+
Sbjct: 153 MTKENLVTAKENTTLEEAERILLENKVEKLLLVDDEFQLKGLITIKDI 200


>gi|237742231|ref|ZP_04572712.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 4_1_13]
 gi|229429879|gb|EEO40091.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 4_1_13]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI      D     V D+M 
Sbjct: 99  ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIKYRKELD---QPVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|228989222|ref|ZP_04149216.1| Inosine-5'-monophosphate dehydrogenase [Bacillus pseudomycoides DSM
           12442]
 gi|228995405|ref|ZP_04155076.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides Rock3-17]
 gi|229003019|ref|ZP_04160877.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228758219|gb|EEM07406.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides Rock1-4]
 gi|228764331|gb|EEM13207.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides Rock3-17]
 gi|228770497|gb|EEM19067.1| Inosine-5'-monophosphate dehydrogenase [Bacillus pseudomycoides DSM
           12442]
          Length = 492

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----VIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V +V+  E QKL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPDHQVYDAEHLMGKYRISGVPIVNNLEEQKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEKLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|56752279|ref|YP_172980.1| hypothetical protein syc2270_d [Synechococcus elongatus PCC 6301]
 gi|81300633|ref|YP_400841.1| CBS [Synechococcus elongatus PCC 7942]
 gi|24251259|gb|AAN46179.1| unknown protein [Synechococcus elongatus PCC 7942]
 gi|56687238|dbj|BAD80460.1| hypothetical protein [Synechococcus elongatus PCC 6301]
 gi|81169514|gb|ABB57854.1| CBS [Synechococcus elongatus PCC 7942]
          Length = 154

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 28/134 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           VK   PL +AI IL++K    + VVDE  +L G+++E D+                    
Sbjct: 16  VKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLMWRESGVPTPPPYIQVLDSF 75

Query: 274 ------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                   + ++L+     +V +VM   P  I  D  L  A +L     +  L V+    
Sbjct: 76  IYLENPARYEQELHKALGETVAEVMTAQPLTIAADRPLPEAARLFNDRKVHRLFVLSGDH 135

Query: 325 KAIGIVHFLDLLRF 338
           + +G++   D++R 
Sbjct: 136 QVVGVITRGDIIRA 149



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D M ++P  +   T LT A+++L   +IS L VVD+  + +G++   DL+
Sbjct: 2   TATVADFMTRDPISVKPQTPLTEAIRILADKHISGLPVVDEAGQLVGVLSETDLM 56



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 24/47 (51%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +    PL +A  + ++++   + V+    ++ G+IT GDI R   + 
Sbjct: 107 IAADRPLPEAARLFNDRKVHRLFVLSGDHQVVGVITRGDIIRAMAQG 153


>gi|289178309|gb|ADC85555.1| Inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis BB-12]
          Length = 523

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 67  KVPVLSAAMDTVTEADMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 121

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD   KL GIIT  D+     +D + L V+DV
Sbjct: 122 DPLTVNPDATLADLDKLCGKFHISGLPVVDHDNKLVGIITNRDMRFIASEDYDHLRVKDV 181

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      D     A  LL ++ I  L +VD      G++   D ++
Sbjct: 182 MTKENLVTGPSDISKKDAHDLLAKNKIEKLPLVDGEGHLTGLITVKDFVK 231


>gi|297566505|ref|YP_003685477.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
 gi|296850954|gb|ADH63969.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
          Length = 209

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              +   V    P++DA+ +L E  F  + V+D    L GI+T+ D+             
Sbjct: 7   MTPNPVSVSPDTPVLDALKLLKEHSFRRLPVMDGQN-LVGIVTDKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L+V +VM K    I  D  L  A  L++++ +  L V  +  + +GI+   
Sbjct: 66  WELNYLLAKLTVHEVMAKPVITIEADQPLEDAALLMQEYKVGGLPVT-EGGQLVGIITVT 124

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 125 DVLKA 129



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  NP  +  DT +  A++LL++H+   L V+D     +GIV   DL
Sbjct: 3   VRDWMTPNPVSVSPDTPVLDALKLLKEHSFRRLPVMDGQN-LVGIVTDKDL 52



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
               ++ A   +H   + P++ I    PL DA  ++ E + G + V  EG +L GIIT  
Sbjct: 66  WELNYLLAKLTVHEVMAKPVITIEADQPLEDAALLMQEYKVGGLPVT-EGGQLVGIITVT 124

Query: 271 DIFRNF 276
           D+ + F
Sbjct: 125 DVLKAF 130


>gi|256845502|ref|ZP_05550960.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_36A2]
 gi|256719061|gb|EEU32616.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_36A2]
          Length = 488

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI      D     V D+M 
Sbjct: 100 ITLNKDSRVYQAEELMSRYKISGLPVIEDDGKLIGIITNRDIKYRKELD---QPVGDIMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 157 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|302382745|ref|YP_003818568.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas subvibrioides
           ATCC 15264]
 gi|302193373|gb|ADL00945.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas subvibrioides
           ATCC 15264]
          Length = 485

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P TS+ M       LAIA+ ++         +LH    +         V         
Sbjct: 39  NIPLTSSAMDTVTESRLAIAMAQAGGLG-----ILHRNMTVQEQADQVRTVKRYESGMVI 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L +   I++ ++     VVD G KL GI+T  D+   F  D NT + + +
Sbjct: 94  NPVTIRPETTLGEVRQIVANRKISGFPVVDAGGKLVGILTNRDMR--FDTDPNTRAADLM 151

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E      A  LLR   I  ++VVD+  +A G++   D+ + 
Sbjct: 152 TTGDLVTVREGAGRDEARTLLRTRKIERVIVVDEDYRATGLITMKDIEKA 201


>gi|75907929|ref|YP_322225.1| RecJ-like protein phosphoesterase [Anabaena variabilis ATCC 29413]
 gi|75701654|gb|ABA21330.1| Phosphoesterase, RecJ-like protein [Anabaena variabilis ATCC 29413]
          Length = 904

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++VV+   +L GII+  D+    H   +   V
Sbjct: 320 MSSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDLDIALHHGFSHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M  + K I  DT L     L+  ++I  L V+   ++ +GIV   D+LR 
Sbjct: 380 KGYMTTDLKTITPDTTLPQIESLMVTYDIGRLPVL-ANEQLVGIVTRTDVLRE 431



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 6/78 (7%)

Query: 263 LKGIITEGDIFRNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           L+G+ T+ DI +   K +        +  D+M    + I  +T +  A ++L ++  S L
Sbjct: 290 LRGVDTQ-DILQQLLKGIKAAIPHPPTARDLMSSPVRTIRPETTIAEAQRILLRYGHSGL 348

Query: 318 MVVDDCQKAIGIVHFLDL 335
            VV+   + +GI+   DL
Sbjct: 349 SVVNPQGQLVGIISRRDL 366



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L    +++     G + V+   ++L GI+T  D
Sbjct: 369 ALHHGFSHAPVKGYMTTDLKTITPDTTLPQIESLMVTYDIGRLPVL-ANEQLVGIVTRTD 427

Query: 272 IFRNFHKDL 280
           + R  H+++
Sbjct: 428 VLRELHQNI 436


>gi|315173697|gb|EFU17714.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1346]
          Length = 282

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|254171826|ref|ZP_04878502.1| inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
 gi|214033722|gb|EEB74548.1| inosine-5'-monophosphate dehydrogenase [Thermococcus sp. AM4]
          Length = 485

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 63/169 (37%), Gaps = 15/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSISEQVEQVRKVKRAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ ++ +     + VV E  K+ G+I++ DI     K      V +V
Sbjct: 102 DVISISPDETIDYALFLMEKNDIDGLPVV-EDGKVVGVISKKDIAVKPGKL-----VREV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P  + E      A+ L+ +H I  L VV+   K +GI+   DL +
Sbjct: 156 MTGEPITVPESVTAEEALNLMFEHRIDRLPVVNSEGKLVGIITMSDLAK 204



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  V       +A+ ++ E R   + VV+   KL GIIT  D+ + 
Sbjct: 156 MTGEPITVPESVTAEEALNLMFEHRIDRLPVVNSEGKLVGIITMSDLAKR 205


>gi|28211998|ref|NP_782942.1| inosine 5'-monophosphate dehydrogenase [Clostridium tetani E88]
 gi|28204441|gb|AAO36879.1| inosine-5-monophosphate dehydrogenase [Clostridium tetani E88]
          Length = 484

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V    + +  
Sbjct: 41  NIPLISAGMDTVTESRMAIAMAREGGIG-----IIHKNMSIEKQAEEVDRVKRQENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA+ ++S+ R   V +  E  KL GIIT  DI     +D  +  + ++
Sbjct: 96  DPFHLSPDKKLQDALDLMSKYRISGVPITVE-GKLVGIITNRDI---VFEDDYSKKISEL 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  ++     E+T +  A ++L++H I  L +VD+     G++   D+
Sbjct: 152 MTDEDLITAPENTTIDQAREILKKHKIEKLPLVDENFNLKGLITIKDI 199



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I +P  +  D  L  A+ L+ ++ IS + +     K +GI+   D++
Sbjct: 94  ITDPFHLSPDKKLQDALDLMSKYRISGVPIT-VEGKLVGIITNRDIV 139


>gi|15678154|ref|NP_275269.1| inosine-5'-monophosphate dehydrogenase related protein VII
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2621166|gb|AAB84632.1| inosine-5'-monophosphate dehydrogenase related protein VII
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 302

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 1/102 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + +A   LS        +V E  ++KGI+T  DI  +       + V D+M KN  
Sbjct: 195 PDITVKEAAARLSSLGIEGAPIV-EDDEVKGIVTLSDITASIAAGTEFMQVSDIMSKNII 253

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +DT++  A++++ +HNI  L+V D   +  GI+   D+L
Sbjct: 254 TVKQDTMIADAIEVMNKHNIGRLIVTDSEGRPTGIITRTDIL 295



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             GT F+  SD+M    +I  VK    + DAI ++++   G + V D   +  GIIT  D
Sbjct: 236 AAGTEFMQVSDIM--SKNIITVKQDTMIADAIEVMNKHNIGRLIVTDSEGRPTGIITRTD 293

Query: 272 IFRNFH 277
           I  +  
Sbjct: 294 ILDSIA 299



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +   +V +V  ++   +  D  +  A   L    I    +V+D +   GIV   D+ 
Sbjct: 175 RSIPKKTVAEVATRDLVTLAPDITVKEAAARLSSLGIEGAPIVEDDE-VKGIVTLSDIT 232


>gi|16331252|ref|NP_441980.1| photosystem I assembly protein [Synechocystis sp. PCC 6803]
 gi|1001427|dbj|BAA10050.1| IMP dehydrogenase [Synechocystis sp. PCC 6803]
          Length = 155

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 61/142 (42%), Gaps = 30/142 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   VK   PL DAI +L+E R   + V+D+ +KL G+I++ D+             
Sbjct: 9   MTPNPITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLMWQESGVDTPPYV 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           R  HK L   +V +VM   P  IL    L  A  L+ +  I  L
Sbjct: 69  MLLDSIIYLQNPARHERELHKALGQ-TVGEVMNDVPISILPTQTLREAAHLMNEKKIRRL 127

Query: 318 MVVD-DCQKAIGIVHFLDLLRF 338
            V++ + ++ IGI+   D++R 
Sbjct: 128 PVLNVESRQLIGILTQGDIIRA 149



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 35/55 (63%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +V +VM  NP  +  DT L  A++LL ++ IS + V+DD +K +G++   DL+
Sbjct: 2   SRTVGEVMTPNPITVKPDTPLQDAIRLLAENRISGMPVLDDQEKLVGVISDTDLM 56



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKD 279
           +     L +A  +++EK+   + V++ E ++L GI+T+GDI R   + 
Sbjct: 106 ILPTQTLREAAHLMNEKKIRRLPVLNVESRQLIGILTQGDIIRAMARG 153


>gi|217077960|ref|YP_002335678.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
           TCF52B]
 gi|217037815|gb|ACJ76337.1| inosine-5'-monophosphate dehydrogenase [Thermosipho africanus
           TCF52B]
          Length = 483

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 14/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LA A+            ++H    +         V  + +    
Sbjct: 37  KIPLLSAAMDTVTEAELAKAIAREGGIG-----IIHKNMTIEEQAHQVKIVKRTENGIID 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + +A  I++E + G + VVDE  KL G+IT  DI   F ++     V ++
Sbjct: 92  DPVTILPNVTVEEADKIMAEYKIGGLPVVDENNKLLGLITNRDIR--FERN-PKRQVSEL 148

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M       +  +   +  A  +L ++ I  L ++++     G++   D+
Sbjct: 149 MTPKDKLVIAKKGISIEEARDILHENKIEKLPLINEDGTLAGLITIKDI 197


>gi|225180869|ref|ZP_03734317.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
 gi|225168350|gb|EEG77153.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
          Length = 220

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                +  V     + DA+ ++ EK    + VV E  +L GI++  D+ R          
Sbjct: 6   RMTKDVITVSPETTVPDALNLMEEKDVRHLPVV-EKGRLTGIVSMLDLVRATPSPATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L  L V+D+M K+   +  DT +  A  L+R + I  L VV + Q  +GIV  
Sbjct: 65  IWELNYLLAKLPVQDIMTKDVISVGPDTPIDDAALLMRTNKIGGLPVVKEEQ-VVGIVTE 123

Query: 333 LDLLRF 338
            D+   
Sbjct: 124 TDIFSA 129



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M K+   +  +T +  A+ L+ + ++  L VV+   +  GIV  LDL+R 
Sbjct: 3   IKDRMTKDVITVSPETTVPDALNLMEEKDVRHLPVVEK-GRLTGIVSMLDLVRA 55



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    P+ DA  ++   + G + VV + +++ GI+TE DIF   
Sbjct: 88  VGPDTPIDDAALLMRTNKIGGLPVV-KEEQVVGIVTETDIFSAV 130


>gi|154151768|ref|YP_001405386.1| CBS domain-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|154000320|gb|ABS56743.1| CBS domain containing protein [Methanoregula boonei 6A8]
          Length = 313

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 61/131 (46%), Gaps = 2/131 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
              G L      +   + +     L      L+DA+ I+  K+ G + +VD+   L GI+
Sbjct: 106 RHNGNLRAAVNESVRTLMTPKPETL-PRNARLLDALKIIVGKKIGGLPIVDDDGTLAGIL 164

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           TE D+ R    + + L++EDVM  + +V   D+ L+   + + +     L V+ D     
Sbjct: 165 TERDVLRMLAAEHSPLTIEDVMSSSLRVTAPDSPLSEVTKDMTRFRFRRLPVISDD-VLF 223

Query: 328 GIVHFLDLLRF 338
           GI+   D++R+
Sbjct: 224 GIITATDIMRY 234



 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/122 (24%), Positives = 51/122 (41%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I A+  +++  F  + V D G +KL+GI+T GD+                   
Sbjct: 50  VPPTQSIISAVATMTDCGFRRLPVTDPGTRKLRGIVTSGDVISFMGGGDKYRLVSVRHNG 109

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   SV  +M   P+ +  +  L  A++++    I  L +VDD     GI+   D+
Sbjct: 110 NLRAAVNESVRTLMTPKPETLPRNARLLDALKIIVGKKIGGLPIVDDDGTLAGILTERDV 169

Query: 336 LR 337
           LR
Sbjct: 170 LR 171



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 15/125 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              S+ +     PL +    ++  RF  + V+ +   L GIIT  DI R           
Sbjct: 186 MSSSLRVTAPDSPLSEVTKDMTRFRFRRLPVISDD-VLFGIITATDIMRYLGSREVFSRL 244

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 ++  L V  +M  +      +T +  A + +   NI  L V++D  + +G+V  
Sbjct: 245 ETGHVAEVMALPVRTLMAGSLFTTTPETPINEAAREMLSKNIGALPVIEDS-RLVGLVTE 303

Query: 333 LDLLR 337
            DL+R
Sbjct: 304 FDLVR 308



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S   F  L  G     + +    +M             P+ +A   +  K  G + V+ E
Sbjct: 237 SREVFSRLETGHVAEVMALPVRTLMAGSLFTT--TPETPINEAAREMLSKNIGALPVI-E 293

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             +L G++TE D+ R F  +
Sbjct: 294 DSRLVGLVTEFDLVRGFSAE 313


>gi|148266098|ref|YP_001232804.1| nucleotidyl transferase [Geobacter uraniireducens Rf4]
 gi|146399598|gb|ABQ28231.1| Nucleotidyl transferase [Geobacter uraniireducens Rf4]
          Length = 351

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 49/110 (44%), Gaps = 1/110 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              LV    P+I+AI I+ +       VVDE  KL G +T+GD+ R   K L     V  
Sbjct: 5   ESILVSPETPIIEAIRIIDDSTLQIALVVDENHKLIGTLTDGDVRRAILKGLQLDNPVRQ 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  NP     +      + ++R   I  + +VD      G+  F +L++
Sbjct: 65  VMNTNPIAADLNDSRESILAIMRATKIRQIPIVDGQGIVAGLELFNNLIQ 114



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 23/43 (53%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +T +  A++++    + + +VVD+  K IG +   D+ R 
Sbjct: 9   VSPETPIIEAIRIIDDSTLQIALVVDENHKLIGTLTDGDVRRA 51


>gi|315918304|ref|ZP_07914544.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium
           gonidiaformans ATCC 25563]
 gi|317059770|ref|ZP_07924255.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313685446|gb|EFS22281.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_5R]
 gi|313692179|gb|EFS29014.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium
           gonidiaformans ATCC 25563]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 67/166 (40%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NVPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     ++ A  I+   +   + V++E  KL GIIT  DI   + KD+N L V ++M 
Sbjct: 100 ITLNQESTVMQAEEIMRRYKISGLPVIEEDGKLIGIITNRDIK--YRKDMNQL-VGEIMT 156

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K         T L  A ++L  + I  L + D+     G++   D+
Sbjct: 157 KEKLITAPVGTTLDEAKEVLLANRIEKLPITDEEGYLKGLITIKDI 202


>gi|308187800|ref|YP_003931931.1| Bifunctional protein glk [Pantoea vagans C9-1]
 gi|308058310|gb|ADO10482.1| Bifunctional protein glk [Pantoea vagans C9-1]
          Length = 279

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 5/178 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     ++ EK  LS++ ++L      + +  ++ +K  + R+++ GIG SG 
Sbjct: 86  ILSDDPLKMVGEKLLTEK--LSAIRATLDINSEEKLNDVLQLLKNAR-RILLVGIGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  +   D+++ +S++G   E+      A + 
Sbjct: 143 VAKDFSWKLMKIGINAVAEQDMHALLASVQAMGPGDVLLAISYTGERREINLAAQEAVQV 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              ++A T    + +   A   L    E +S     A  +S   QLA+ D L +AL++
Sbjct: 203 GADVVAFTGFTPNTLQQSASYCLYTVAEEQSTR--SAAISSTTAQLALTDLLFMALVQ 258


>gi|291461045|ref|ZP_06026621.2| inosine-5'-monophosphate dehydrogenase [Fusobacterium periodonticum
           ATCC 33693]
 gi|291379269|gb|EFE86787.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium periodonticum
           ATCC 33693]
          Length = 488

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL             +H    +         V  S   + +
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGIG-----FIHKNMSIEEQAAEVDRVKRSESGMII 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     +  A  ++S  +   + V++   KL GIIT  DI   + KDL+   V D+
Sbjct: 98  NPITLNKDSRVYQAEELMSRYKISGLPVIENDGKLIGIITNRDIK--YRKDLDQ-PVGDI 154

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 155 MTSKGLITAPVGTNLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|169235842|ref|YP_001689042.1| IMP dehydrogenase [Halobacterium salinarum R1]
 gi|167726908|emb|CAP13694.1| IMP dehydrogenase [Halobacterium salinarum R1]
          Length = 499

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 59/169 (34%), Gaps = 12/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS------G 227
            P  SA M       LAIA+            VLH       +      V  +       
Sbjct: 54  VPVLSAAMDTVTESRLAIAMAREGGLG-----VLHQNMDTDRVVAEVERVKRADELVIDR 108

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +++        +     ++         VVD+   ++GII+  DI        +   V +
Sbjct: 109 ENVVTAAPEQTVEAVDEMMDRSDVSGAPVVDDDDTVRGIISATDIRPYLEVGESDA-VRE 167

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M        ED     A++L+ +H I  + +V+D Q  +G+V    +L
Sbjct: 168 AMTDEVITAPEDITARDALELMYEHKIERVPIVNDEQHLVGLVTMQGIL 216


>gi|329766621|ref|ZP_08258164.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
           limnia SFB1]
 gi|329136876|gb|EGG41169.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrosoarchaeum
           limnia SFB1]
          Length = 477

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/164 (25%), Positives = 67/164 (40%), Gaps = 4/164 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+A+A+  +        ++         L V  S  +   ++   
Sbjct: 40  NIPFVSANMDTVTESAMAVAMARAGGIGIIHRFLTIKEQANEVLKVKRSGSVM-IENPYA 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + DAI    EK    + VVD   KL GI+T+ D+   F  D   L ++DVM K+
Sbjct: 99  VSSDKTVQDAINYAEEKEISGLLVVDSNSKLVGIVTDRDLL--FETDSTRL-IKDVMTKD 155

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                    L  A ++L +H I  L ++DD     G++   D+ 
Sbjct: 156 VVTAKLGVSLDEAKKILHKHRIEKLPIIDDSGFIKGLITSKDIT 199


>gi|312889801|ref|ZP_07749347.1| putative signal transduction protein with CBS domains
           [Mucilaginibacter paludis DSM 18603]
 gi|311297727|gb|EFQ74850.1| putative signal transduction protein with CBS domains
           [Mucilaginibacter paludis DSM 18603]
          Length = 142

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKD 279
           + + G  +  V     + DA+ ++ EK    + ++ E + LKGI TE D  R      + 
Sbjct: 8   LENKGHQVYAVSPETSVYDALHMMMEKNISSLLIM-ENEVLKGIFTERDYARKLVLMGRS 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + ++M  N   I     +   M+++  + I  L V+D+  +  G+V   D+++F
Sbjct: 67  SRETPIGEIMTANLFTITPSETIDHCMEMMSTYKIRHLPVIDN-NRVTGMVSIGDVVKF 124


>gi|284161530|ref|YP_003400153.1| hypothetical protein Arcpr_0412 [Archaeoglobus profundus DSM 5631]
 gi|284011527|gb|ADB57480.1| CBS domain containing protein [Archaeoglobus profundus DSM 5631]
          Length = 362

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 54/113 (47%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     + D I+++  ++     VV +  +L GI+T  DI      D+    V
Sbjct: 230 MTPNPICVTPDMTVRDVISLMLRQKHLGYPVV-KDGRLVGIVTLKDITDADENDV----V 284

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E+VM +    +  +T +  A++++ ++ I  L VV +  + +GI+   D+++ 
Sbjct: 285 ENVMSRKVIAVTPETKVFEALRIMSENRIGRLPVV-EGDRVVGIISRSDIIKL 336



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 25/65 (38%), Gaps = 5/65 (7%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFL 333
               L+   V DVM  NP  +  D  +   + L+ +     L   VV    + +GIV   
Sbjct: 217 LEGLLSNYKVGDVMTPNPICVTPDMTVRDVISLMLRQK--HLGYPVV-KDGRLVGIVTLK 273

Query: 334 DLLRF 338
           D+   
Sbjct: 274 DITDA 278


>gi|309799253|ref|ZP_07693501.1| inosine-5'-monophosphate dehydrogenase [Streptococcus infantis
           SK1302]
 gi|308117098|gb|EFO54526.1| inosine-5'-monophosphate dehydrogenase [Streptococcus infantis
           SK1302]
          Length = 492

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N    +
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQPISK 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +N       T L  A  +L++H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSENLVTAPVGTDLKTAESILQEHRIEKLPLVDEKGRLSGLITIKDI 206


>gi|256810616|ref|YP_003127985.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256793816|gb|ACV24485.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 194

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +             +        + D   I++E   G V +V E  K  GI+TE DI 
Sbjct: 1   MKIAYDIPVSEVMSFPVITATKDMTIYDIANIMTENNIGAVVIV-ENNKPVGILTERDIV 59

Query: 273 FRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L    V  E+VM K    I ++  LT A +++  H I  L VV    + +GI+
Sbjct: 60  KRVVSKNLKPKDVLAEEVMSKKIVTIPQNASLTEAAKIMATHGIKRLPVV-KDGELVGII 118

Query: 331 HFLDLLR 337
              D+++
Sbjct: 119 TQSDIVK 125


>gi|229542252|ref|ZP_04431312.1| inosine-5'-monophosphate dehydrogenase [Bacillus coagulans 36D1]
 gi|229326672|gb|EEN92347.1| inosine-5'-monophosphate dehydrogenase [Bacillus coagulans 36D1]
          Length = 488

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 67/183 (36%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           +              P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDTSVALTETLKLNIPIISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            +  A  ++ + R   V +V+  + QKL GI+T  D+ 
Sbjct: 85  VDRVKRSENGVITNPFFLTPDEQVFAAEHLMGKYRISGVPIVNNRDEQKLVGILTNRDMR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  +  + DVM K N       T L  A QLL +H I  L +VD+     G++  
Sbjct: 145 --FIED-YSTRISDVMTKENLVTAPVGTTLKEAEQLLHRHKIEKLPLVDENGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 28/61 (45%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L +A  +L   +   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTRISDVMTKENLVTAPVGTTLKEAEQLLHRHKIEKLPLVDENGVLKGLITIKDIEKVI 208

Query: 277 H 277
            
Sbjct: 209 E 209


>gi|304398614|ref|ZP_07380486.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
 gi|304353825|gb|EFM18200.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
          Length = 279

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 78/178 (43%), Gaps = 5/178 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     ++ EK  LS++ ++L      + +  ++ +K  + R+++ GIG SG 
Sbjct: 86  ILSDDPLKMVGEKLLTEK--LSAIRATLDINSEEKLNDVLQLLKNAR-RILLVGIGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  +   D+++ +S++G   E+      A + 
Sbjct: 143 VAKDFSWKLMKIGINAVAEQDMHALLASVQAMGPGDVLLAISYTGERREINLAAQEAVQV 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              ++A T    + +   A   L    E +S     A  +S   QLA+ D L +AL++
Sbjct: 203 GADVVAFTGFTPNTLQQSAGYCLYTVAEEQSTR--SAAISSTTAQLALTDLLFMALVQ 258


>gi|126732398|ref|ZP_01748197.1| hypothetical protein SSE37_05597 [Sagittula stellata E-37]
 gi|126707037|gb|EBA06104.1| hypothetical protein SSE37_05597 [Sagittula stellata E-37]
          Length = 289

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 3/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LS+L  +     + +   AV+ + A   R+   G G SG +           G P     
Sbjct: 111 LSNLNWAQSRLDTARIGDAVD-LLATATRIEFFGFGASGIVARDAQQKFPLFGVPCGAPS 169

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A       GM+   D  + +S +G + E+ A +  A+      + IT +  S +  H D
Sbjct: 170 DAHQMFMTAGMLRPGDAAVAISNTGQTREVVAAMATAQERGAATVGITGQADSPLCRHCD 229

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L    E         PT S +  L + D L+ A+   R  + +D
Sbjct: 230 VTLM--VETLENTDIYTPTVSRLSHLVVIDILSTAVSLRRGEAHHD 273


>gi|261402653|ref|YP_003246877.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
 gi|261369646|gb|ACX72395.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
          Length = 137

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 36/119 (30%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  V     +++A   + + +   + VV+E  ++ GIIT  DI  N  KD  TL  
Sbjct: 14  MTKDVITVDSEEGVVEAFEKMLKYKISSLPVVNEKNEVVGIITTTDIGYNLIKDRYTLET 73

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLL--RQHN--ISVLMVVDDCQKAIGIVHFLDLLRF 338
            V DVM KN   I E   L  A++ +        I+ L VVD+  K +GI+   D++R 
Sbjct: 74  KVGDVMTKNVITIKESANLLEAIKKMNLEDKKEIINQLPVVDENNKLVGIISDGDIIRI 132



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 33/60 (55%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L+++ + DVM K+   +  +  +  A + + ++ IS L VV++  + +GI+   D+
Sbjct: 1   MIETLSSIKIRDVMTKDVITVDSEEGVVEAFEKMLKYKISSLPVVNEKNEVVGIITTTDI 60



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILS--EKR--FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  +K    L++AI  ++  +K+     + VVDE  KL GII++GDI R   K
Sbjct: 79  MTKNVITIKESANLLEAIKKMNLEDKKEIINQLPVVDENNKLVGIISDGDIIRIISK 135


>gi|50302383|ref|XP_451126.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640257|emb|CAH02714.1| KLLA0A02893p [Kluyveromyces lactis]
          Length = 637

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 17/143 (11%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------- 260
           G K        + +  S     + K    + +A  ++S KR  C+ VVD           
Sbjct: 61  GKKNRNASSPGTVLSLSPSEPVVCKPSATVYEAAQLMSAKRENCILVVDYDDDTNLEDDS 120

Query: 261 ---QKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                L GI T  D+  R     L  ++++++ +M  +P     DTL + A+ L+ +   
Sbjct: 121 SISGALLGIFTAKDLAFRVVGTGLKASSVTIDQIMTPHPLCATSDTLASDALNLMVERGF 180

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L V+D+   A  I+  LD+ +
Sbjct: 181 RHLPVIDEDTHA--IISVLDITK 201



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 4/127 (3%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                 +       S +         V +   + +A   + +     V V +E  ++ GI
Sbjct: 247 FEHMKSVMNGPTLESVLHDETTVPSYVNVKTSVHEAALTMKDNHTTAVLVKNEVNEVSGI 306

Query: 267 ITEGD-IFRNFHKDLNTLSVE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            T  D + R     L+  +V    VM   P V  +   +  A++ + + +   L VVDD 
Sbjct: 307 FTSKDVVLRVIAAGLDPKTVSVIRVMTPQPDVAPKTLSIQQALRKMFEGHYLNLPVVDD- 365

Query: 324 QKAIGIV 330
            + +GIV
Sbjct: 366 GEIVGIV 372


>gi|83589984|ref|YP_429993.1| signal transduction protein [Moorella thermoacetica ATCC 39073]
 gi|83572898|gb|ABC19450.1| putative signal transduction protein with CBS domains [Moorella
           thermoacetica ATCC 39073]
          Length = 214

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------- 274
           H       V     ++DA+ ++ + +   + V+ +  +L G++TE DI R          
Sbjct: 6   HMTPDPITVTKETSVLDALELMKKNKIRRLPVI-QDGRLIGLVTERDILRVSPSPASTLS 64

Query: 275 --NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  +  ++V+D MIK P  +  D  +  A  L+R+H I  L+V++   + +GI+  
Sbjct: 65  VFEVNYLVAKMTVKDAMIKRPVTVPPDMTIEEAALLMREHKIDNLLVMEKE-RLVGIITQ 123

Query: 333 LDLLRF 338
            DL   
Sbjct: 124 TDLFEA 129



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D M  +P  + ++T +  A++L++++ I  L V+    + IG+V   D+LR
Sbjct: 3   VRDHMTPDPITVTKETSVLDALELMKKNKIRRLPVI-QDGRLIGLVTERDILR 54



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                  V     + +A  ++ E +   + V+ E ++L GIIT+ D+F    K
Sbjct: 81  MIKRPVTVPPDMTIEEAALLMREHKIDNLLVM-EKERLVGIITQTDLFEALIK 132


>gi|294086050|ref|YP_003552810.1| inosine-5'-monophosphate dehydrogenase [Candidatus Puniceispirillum
           marinum IMCC1322]
 gi|292665625|gb|ADE40726.1| inosine-5'-monophosphate dehydrogenase [Candidatus Puniceispirillum
           marinum IMCC1322]
          Length = 506

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 12/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ ++        +F +     ++  +    + ++ +  + 
Sbjct: 56  NIPLISAAMDTVTEHRLAIAMAQAGGLGVVHKNFTIEEQAAEIAKVKKFEAGMVVNPLT- 114

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIFRNFHKDLNTLSVE 286
             +     L DA+ ++       + VV++      KL GI+T  D+   F  DL    V 
Sbjct: 115 --ITPEQTLGDALDMMRTHSISGIPVVEKTGTTPQKLVGILTNRDVR--FASDL-EQKVA 169

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +    + +      A +LL +H I  L+VV+     IG++   D+ + 
Sbjct: 170 DLMTREVVTVRDGAAPDEARRLLHEHRIEKLLVVNSDGACIGLITVKDMEKA 221


>gi|14521642|ref|NP_127118.1| dehydrogenase [Pyrococcus abyssi GE5]
 gi|5458861|emb|CAB50348.1| Dehydrogenase, substrate unknown [Pyrococcus abyssi GE5]
          Length = 392

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V       P+VK    L  A  +L E     + V +   ++ G+I++  +  R  
Sbjct: 64  PTKAKVRDVYKPAPVVKPTDDLSHAAKLLLETDLRSLPVGENKAEILGVISDMALLERVV 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     VE+ M K+   +  D  +  A+  +R H IS + VVD+  K  G+V   DL+
Sbjct: 124 AEEFGKRKVEEFMTKDVITLGPDDTVAKALATMRDHGISRIPVVDEEGKLEGLVTLHDLI 183



 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D  +L              + M     +  +     +  A+  + +     + VVDE  K
Sbjct: 115 DMALLERVVAEEFGKRKVEEFM--TKDVITLGPDDTVAKALATMRDHGISRIPVVDEEGK 172

Query: 263 LKGIITEGDIFRNFHKDLNT---------------LSVEDVMIKNPKVILEDTLLTVAMQ 307
           L+G++T  D+   F K                   + + + MIK    I+ +  +  A+ 
Sbjct: 173 LEGLVTLHDLIIRFIKPRFKAQYGELAGEKIPPFSMKLREAMIKGVITIMPEATIREAVS 232

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ +NI  L+VVD+  K +GI+   DLL
Sbjct: 233 TMKDNNIDGLVVVDENNKVVGILTVKDLL 261



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHKDLNTLSVEDVMIK 291
           + I  PL +AI I+ ++    + V D+    KG++T +  I  +   D     V DV   
Sbjct: 17  IDINAPLSEAIGIIEKEDPDLILVFDDN-VYKGVLTQDLIIRSHLKWDPTKAKVRDVYKP 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            P V+     L+ A +LL + ++  L V ++  + +G++ 
Sbjct: 76  AP-VVKPTDDLSHAAKLLLETDLRSLPVGENKAEILGVIS 114


>gi|49476689|ref|YP_034368.1| inosine 5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|49328245|gb|AAT58891.1| IMP dehydrogenase (inositol-monophosphate dehydrogenase) [Bacillus
           thuringiensis serovar konkukian str. 97-27]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|75764313|ref|ZP_00743847.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218895149|ref|YP_002443560.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus G9842]
 gi|228898766|ref|ZP_04063050.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis IBL
           4222]
 gi|228905809|ref|ZP_04069708.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis IBL
           200]
 gi|228937315|ref|ZP_04099963.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228970201|ref|ZP_04130862.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228976771|ref|ZP_04137185.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           Bt407]
 gi|74488200|gb|EAO51882.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|218545932|gb|ACK98326.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus G9842]
 gi|228782933|gb|EEM31097.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           Bt407]
 gi|228789502|gb|EEM37420.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228822340|gb|EEM68320.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228853817|gb|EEM98575.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis IBL
           200]
 gi|228860858|gb|EEN05234.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis IBL
           4222]
 gi|326937805|gb|AEA13701.1| inositol-5-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 487

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|222625756|gb|EEE59888.1| hypothetical protein OsJ_12490 [Oryza sativa Japonica Group]
          Length = 867

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 735 WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 794

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 795 DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 847



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  + +   + ++     +E D+          +      D+M   + +  
Sbjct: 746 VKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENQLIT 805

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    ++ A+ +++EKR   + V+D    + G+++ GDI R  
Sbjct: 806 VKPDTRVLQAMQLMTEKRIRHIPVIDGTG-MVGMVSIGDIVRAV 848


>gi|14521857|ref|NP_127333.1| inosine 5'-monophosphate dehydrogenase [Pyrococcus abyssi GE5]
 gi|13878566|sp|Q9UY49|IMDH_PYRAB RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|5459077|emb|CAB50563.1| guaB inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP
           dehydrogenase) (IMPDH) (IMPD) [Pyrococcus abyssi GE5]
          Length = 485

 Score = 91.9 bits (227), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 69/168 (41%), Gaps = 15/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI-- 230
             P  SA M       +A+A+            V+H    +         V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIEEQVEQVKRVKKAERFIVE 101

Query: 231 --PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A+ ++ +     + VV E +K+ GII++ DI     K      V+++
Sbjct: 102 DVITISPEETVDFALFLMEKHDIDGLPVV-ENEKVVGIISKKDIAAREGKL-----VKEL 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K+   + E+  +  A++++ ++ I  L VVD   + IG++   DL+
Sbjct: 156 MTKDVITVPENIEVEEALKIMIENRIDRLPVVDKEGRLIGLITMSDLV 203


>gi|324989569|gb|EGC21515.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK353]
 gi|325686467|gb|EGD28496.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK72]
          Length = 507

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 114 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 170

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 171 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDNGCLSGLITIKDI 220


>gi|294496883|ref|YP_003560583.1| inosine-5'-monophosphate dehydrogenase [Bacillus megaterium QM
           B1551]
 gi|294346820|gb|ADE67149.1| inosine-5'-monophosphate dehydrogenase [Bacillus megaterium QM
           B1551]
          Length = 488

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  E         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDMSVELTKTLKLKVPFISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            +  A  ++ + R   V +V+  E QKL GI+T  D+ 
Sbjct: 85  VDKVKRSESGVITDPFFLTPENQVFAAEHLMGKYRISGVPIVNNEEEQKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K   V     T L  A ++L+Q+ I  L +VDD     G++  
Sbjct: 145 --FIQD-YSMQIADVMTKEELVTAPVGTTLEEAEKILQQYKIEKLPLVDDNGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|229015413|ref|ZP_04172418.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1273]
 gi|229021620|ref|ZP_04178208.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1272]
 gi|228739666|gb|EEL90074.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1272]
 gi|228745880|gb|EEL95877.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1273]
          Length = 487

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|329938549|ref|ZP_08287974.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
 gi|329302522|gb|EGG46413.1| hypothetical protein SGM_3466 [Streptomyces griseoaurantiacus M045]
          Length = 253

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KDLNTLSVEDV 288
           +   P  + + +L   R G + VVDE  K+ G+++  D+ R             ++ +D+
Sbjct: 18  RRTTPFKELVRLLDRHRIGGLPVVDEDDKVVGVLSGTDLVRAQAGRSGRAPAGAVTAQDL 77

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M      +  +  +  A +L+ +  +  L V+D+  + IGI    DLLR
Sbjct: 78  MSTPAVTVHPEQSVPDAARLMERRGVERLPVIDEEDRLIGIATRRDLLR 126



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V  VM  +       T     ++LL +H I  L VVD+  K +G++   DL+R 
Sbjct: 5   TVGQVMTGDVVQARRTTPFKELVRLLDRHRIGGLPVVDEDDKVVGVLSGTDLVRA 59



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 16/84 (19%), Positives = 27/84 (32%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S  D      G          +           V     + DA  ++  +    + V+D
Sbjct: 51  LSGTDLVRAQAGRSGRAPAGAVTAQDLMSTPAVTVHPEQSVPDAARLMERRGVERLPVID 110

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
           E  +L GI T  D+ R F +  + 
Sbjct: 111 EEDRLIGIATRRDLLRVFLRTDDD 134


>gi|323350819|ref|ZP_08086478.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           VMC66]
 gi|322122993|gb|EFX94696.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           VMC66]
          Length = 507

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 114 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 170

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 171 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDNGCLSGLITIKDI 220


>gi|295702250|ref|YP_003595325.1| inosine-5'-monophosphate dehydrogenase [Bacillus megaterium DSM
           319]
 gi|294799909|gb|ADF36975.1| inosine-5'-monophosphate dehydrogenase [Bacillus megaterium DSM
           319]
          Length = 488

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  E         P  SA M       +AIA+            ++H    +      
Sbjct: 30  VDMSVELTKTLKLKVPFISAGMDTVTEAEMAIAMARQGGLG-----IIHKNMSIEQQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            +  A  ++ + R   V +V+  E QKL GI+T  D+ 
Sbjct: 85  VDKVKRSESGVITDPFFLTPENQVFAAEHLMGKYRISGVPIVNNEEEQKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K   V     T L  A ++L+Q+ I  L +VDD     G++  
Sbjct: 145 --FIQD-YSMQIADVMTKEELVTAPVGTTLEEAEKILQQYKIEKLPLVDDNGVLKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|227549905|ref|ZP_03979954.1| IMP dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
 gi|227078001|gb|EEI15964.1| IMP dehydrogenase [Corynebacterium lipophiloflavum DSM 44291]
          Length = 510

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 62/172 (36%), Gaps = 19/172 (11%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        +   + +        
Sbjct: 57  IPIASAAMDTVTESRMAIAMARQGGIGVLHRNLSAQD--------QAEHVDIVKRSESGM 108

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                       L D   + +  R   + VVD+   L GIIT  D+   F  D +  SV 
Sbjct: 109 ISDPVTASPEMTLHDVDALCARFRISGLPVVDDSGTLVGIITNRDMR--FEADFDR-SVS 165

Query: 287 DVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM   P V+  D      A+ LL  + +  L +VD+     G++   D ++
Sbjct: 166 EVMTAMPLVVARDGVSKEEALALLSANKVEKLPIVDEAGVLTGLITVKDFVK 217


>gi|227502740|ref|ZP_03932789.1| IMP dehydrogenase [Corynebacterium accolens ATCC 49725]
 gi|227076470|gb|EEI14433.1| IMP dehydrogenase [Corynebacterium accolens ATCC 49725]
          Length = 506

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 60/169 (35%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       +AIA+            VLH              V  S   +   
Sbjct: 54  VPLASAAMDTVTEARMAIAMARQGGIG-----VLHRNLSAEAQAEQVEIVKRSESGMVTD 108

Query: 234 K----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                    + +   + +  R   + VVD    L GI T  D+   F  D +   V DVM
Sbjct: 109 PVTARPEMTIGEVDALCARFRISGLPVVDRDGTLLGICTNRDMR--FEPDFDR-KVSDVM 165

Query: 290 IKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P V+  E      A++LL  + +  L +VD   K IG++   D ++
Sbjct: 166 TAMPLVVAREGVSKDEALELLSANKVEKLPIVDADNKLIGLITVKDFVK 214


>gi|218901214|ref|YP_002449048.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH820]
 gi|218536580|gb|ACK88978.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH820]
          Length = 487

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|30018286|ref|NP_829917.1| inositol-5-monophosphate dehydrogenase [Bacillus cereus ATCC 14579]
 gi|206972681|ref|ZP_03233621.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1134]
 gi|218234538|ref|YP_002364863.1| inosine 5'-monophosphate dehydrogenase [Bacillus cereus B4264]
 gi|228918963|ref|ZP_04082344.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228950560|ref|ZP_04112696.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228956453|ref|ZP_04118251.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229039917|ref|ZP_04189683.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH676]
 gi|229067776|ref|ZP_04201095.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus F65185]
 gi|229077285|ref|ZP_04209968.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock4-2]
 gi|229107698|ref|ZP_04237336.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock1-15]
 gi|229125529|ref|ZP_04254563.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|229142818|ref|ZP_04271262.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|229148421|ref|ZP_04276679.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus m1550]
 gi|229176612|ref|ZP_04304019.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus 172560W]
 gi|229188297|ref|ZP_04315348.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 10876]
 gi|296500846|ref|YP_003662546.1| inositol-5-monophosphate dehydrogenase [Bacillus thuringiensis
           BMB171]
 gi|29893826|gb|AAP07118.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 14579]
 gi|206732401|gb|EDZ49583.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1134]
 gi|218162495|gb|ACK62487.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus B4264]
 gi|228595165|gb|EEK52933.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 10876]
 gi|228606859|gb|EEK64273.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus 172560W]
 gi|228635030|gb|EEK91601.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus m1550]
 gi|228640632|gb|EEK97018.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST24]
 gi|228657913|gb|EEL13717.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-Cer4]
 gi|228675738|gb|EEL30944.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock1-15]
 gi|228706008|gb|EEL58313.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock4-2]
 gi|228715329|gb|EEL67186.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus F65185]
 gi|228727407|gb|EEL78598.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH676]
 gi|228803210|gb|EEM50030.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|228809103|gb|EEM55586.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|228840678|gb|EEM85938.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|296321898|gb|ADH04826.1| inositol-5-monophosphate dehydrogenase [Bacillus thuringiensis
           BMB171]
          Length = 487

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|30260202|ref|NP_842579.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Ames]
 gi|47525264|ref|YP_016613.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49183047|ref|YP_026299.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Sterne]
 gi|165873227|ref|ZP_02217838.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0488]
 gi|167635073|ref|ZP_02393390.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0442]
 gi|167641757|ref|ZP_02400000.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0193]
 gi|170688915|ref|ZP_02880117.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0465]
 gi|170707548|ref|ZP_02898001.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0389]
 gi|177655677|ref|ZP_02937002.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0174]
 gi|190569328|ref|ZP_03022220.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis
           Tsiankovskii-I]
 gi|196036378|ref|ZP_03103775.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus W]
 gi|196041955|ref|ZP_03109242.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus NVH0597-99]
 gi|196047688|ref|ZP_03114892.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus 03BB108]
 gi|225862065|ref|YP_002747443.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus 03BB102]
 gi|227812686|ref|YP_002812695.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str. CDC
           684]
 gi|229601375|ref|YP_002864664.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0248]
 gi|254686601|ref|ZP_05150460.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           CNEVA-9066]
 gi|254724154|ref|ZP_05185939.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A1055]
 gi|254737011|ref|ZP_05194716.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Western North America USA6153]
 gi|254744209|ref|ZP_05201890.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Kruger B]
 gi|254755969|ref|ZP_05208001.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Vollum]
 gi|254761670|ref|ZP_05213688.1| inosine 5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Australia 94]
 gi|30253523|gb|AAP24065.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Ames]
 gi|47500412|gb|AAT29088.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49176974|gb|AAT52350.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           Sterne]
 gi|164711025|gb|EDR16591.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0488]
 gi|167510311|gb|EDR85714.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0193]
 gi|167529547|gb|EDR92297.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0442]
 gi|170127544|gb|EDS96418.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0389]
 gi|170667139|gb|EDT17900.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0465]
 gi|172080017|gb|EDT65117.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0174]
 gi|190559550|gb|EDV13543.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis
           Tsiankovskii-I]
 gi|195991008|gb|EDX54979.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus W]
 gi|196021473|gb|EDX60176.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus 03BB108]
 gi|196027210|gb|EDX65830.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus NVH0597-99]
 gi|225786504|gb|ACO26721.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus 03BB102]
 gi|227003304|gb|ACP13047.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str. CDC
           684]
 gi|229265783|gb|ACQ47420.1| inosine-5'-monophosphate dehydrogenase [Bacillus anthracis str.
           A0248]
          Length = 487

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|87307841|ref|ZP_01089984.1| Inosine-5-monophosphate dehydrogenase [Blastopirellula marina DSM
           3645]
 gi|87289455|gb|EAQ81346.1| Inosine-5-monophosphate dehydrogenase [Blastopirellula marina DSM
           3645]
          Length = 491

 Score = 91.5 bits (226), Expect = 1e-16,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M      A+AIAL +          V+H    +         V  S + I +
Sbjct: 42  NIPLISSPMDTVTESAMAIALAKEGGLG-----VIHKNLSIQRQTEEVYKVKRSANGIIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                    P+ +A  ++ +     + +     KL GI+T  D+      + +TL +E+V
Sbjct: 97  DPVTMPPDAPVQEARAVMEQHNVSGMPITLADGKLVGILTRRDLRFL---ESHTLRIEEV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N         L  A Q+L    +  L++VD+  K  G++   D+
Sbjct: 154 MTKDNLVTATGTVTLAEAEQILTAKKVEKLLLVDEEYKLTGLITIKDI 201


>gi|227828949|ref|YP_002830729.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831687|ref|YP_002833467.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580644|ref|YP_002839044.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229586156|ref|YP_002844658.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238621141|ref|YP_002915967.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284999243|ref|YP_003421011.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227458135|gb|ACP36822.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227460745|gb|ACP39431.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228011360|gb|ACP47122.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228021206|gb|ACP56613.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238382211|gb|ACR43299.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284447139|gb|ADB88641.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323476058|gb|ADX86664.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478781|gb|ADX84019.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 142

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 57/124 (45%), Gaps = 2/124 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  +       S  +VK+G   I+A  I+ +   G V +VDE     GI TE D+ R   
Sbjct: 1   MAVTSRSLIKRSPVVVKVGTKAIEACKIMYQNNIGSVVIVDEKGYPVGIFTERDVLRAVA 60

Query: 278 KDLN-TLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              N   ++E++        +  ++ +    + + ++NI  L+VVD+  K +G+V   D+
Sbjct: 61  CGKNLNDNIENLGTFGKLITVKPNSPIGEIAEKMVKNNIRHLVVVDEEGKLVGVVSIKDI 120

Query: 336 LRFG 339
           +   
Sbjct: 121 VNEK 124


>gi|332141956|ref|YP_004427694.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327551978|gb|AEA98696.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 489

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +         +  +    S V+      
Sbjct: 41  NIPMVSAAMDTVSEARLAIALAQEGGIGFIHKNMKPEEQAKHVREVKKYESGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I++     +    V D+   L GI+T  D+   F K L  L + +VM 
Sbjct: 98  VTVDKDATIGDVISLSKRLGYSGFPVTDKDNNLIGIVTGRDLR--FEKRL-ELPISNVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E     V + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 GKDDLVTVKEGASSDVVLDLMHEHRIEKILVVDDAFKLTGLITVKDFQKA 204


>gi|160334181|gb|ABX24505.1| putative transport protein [Streptomyces cacaoi subsp. asoensis]
          Length = 267

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/151 (18%), Positives = 54/151 (35%), Gaps = 21/151 (13%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
              P           SD+M +      V       +   +L+E     V VV++ +++ G
Sbjct: 26  RTRPREAGAMRHRTVSDLMTTSVVK--VHRDTGFKEIAKLLAEHDITAVPVVNDEERVMG 83

Query: 266 IITEGDIFRNFHKDLN-------------------TLSVEDVMIKNPKVILEDTLLTVAM 306
           +++E D+ R     L+                     +   +M               A 
Sbjct: 84  VVSEADLLRKEAAQLDPAGLLPVLHPGPADRAKAEATTAAGLMHSPAVTAGPQWTAVEAA 143

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           Q++ +H +  L VVD+  + +G++   DLLR
Sbjct: 144 QVMERHRVKRLPVVDEAGRLVGLISRADLLR 174



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           VLHPG          +                  ++A  ++   R   + VVDE  +L G
Sbjct: 106 VLHPGPADRAKAEATTAAGLMHSPAVTAGPQWTAVEAAQVMERHRVKRLPVVDEAGRLVG 165

Query: 266 IITEGDIFRNFHK 278
           +I+  D+ R F +
Sbjct: 166 LISRADLLRVFLR 178


>gi|148359262|ref|YP_001250469.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila str.
           Corby]
 gi|296107309|ref|YP_003619009.1| inosine 5'-monophosphate dehydrogenase [Legionella pneumophila
           2300/99 Alcoy]
 gi|148281035|gb|ABQ55123.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila str.
           Corby]
 gi|295649210|gb|ADG25057.1| inosine 5'-monophosphate dehydrogenase [Legionella pneumophila
           2300/99 Alcoy]
          Length = 490

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 42  NMPLISAAMDTVTEARLAIALAQEGGLG-----IIHKNMSIADQAEEVRKVKKFESGMVK 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++++  F  V VVD G+ L GI+T  DI   F  ++N L+V  V
Sbjct: 97  DPISVTPDLTVKELLAVMTKYNFSGVPVVD-GKHLVGIVTSRDIR--FETNMN-LTVAQV 152

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M    +   + E         LL +H I  L+VV++  +  G++   D+ +  
Sbjct: 153 MTPKGRLVTVKEGASREEVRSLLHKHRIEKLLVVNEDFELRGLITVKDIQKAK 205


>gi|3618249|emb|CAA09265.1| inosine 5' monophosphate dehydrogenase [Streptomyces coelicolor
           A3(2)]
          Length = 523

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 66/190 (34%), Gaps = 8/190 (4%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS---ENDFYVLHP 209
           + +A   L     P+ C     P  S      +     +A+  +R           +   
Sbjct: 47  SRNAVEHLVPGISPQRCGFN-IPGCSPAAMDKVDRVPELAISMARQGGVGVPCTATLSIE 105

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G +                +   +     L +A  + ++ R   V V D   KL GI+T 
Sbjct: 106 GTRPTRSTWLKRSESGMVANPITIHPDSTLAEADALCAKFRISGVPVTDGAGKLLGIVTN 165

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            D+   F  D  +  V +VM   P V  +       AM LLR+H I  L +VD      G
Sbjct: 166 RDM--AFETD-RSRQVREVMTPMPLVTGQVGISGVEAMDLLRRHKIEKLPLVDGDGILKG 222

Query: 329 IVHFLDLLRF 338
           ++   D ++ 
Sbjct: 223 LITVKDFVKA 232


>gi|163848024|ref|YP_001636068.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525911|ref|YP_002570382.1| CBS domain-containing membrane protein [Chloroflexus sp. Y-400-fl]
 gi|163669313|gb|ABY35679.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449790|gb|ACM54056.1| CBS domain containing membrane protein [Chloroflexus sp. Y-400-fl]
          Length = 435

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 56/155 (36%), Gaps = 25/155 (16%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            N F           L    +        +P V    PL + +  +       V VVD+ 
Sbjct: 260 ANTFASSSEVLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQN 319

Query: 261 QKLKGIITEGDIFRNFHK-------------------------DLNTLSVEDVMIKNPKV 295
           +++ GII++GDI R   +                          L  L+   VM      
Sbjct: 320 RRVVGIISDGDILRRAARPVAPGLLQRFAVWIGGGARPPELELALKNLTAAAVMTSPVLT 379

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +  DT +  A++L+ +  I  L VVD+  + +G+V
Sbjct: 380 VNPDTPIISAVELMIERRIKRLPVVDEEGRLVGMV 414



 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 52/134 (38%), Gaps = 22/134 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     + + + +L E+    + VVD  +++ GI+T+ D+ +           
Sbjct: 124 MNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTDADLLQRGVSQLPLHLQ 183

Query: 276 ------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                                  DVM  NP  I     LT A  L+ +H+   L VVD+ 
Sbjct: 184 QLLPGAERAAHLAAVAARPERAADVMTPNPTTIPATASLTQAALLMTEHDHKRLPVVDEA 243

Query: 324 QKAIGIVHFLDLLR 337
            + +G++   DLL+
Sbjct: 244 GRLVGMLSRSDLLQ 257



 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 52/125 (41%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
              +   +     L  A  +++E     + VVDE  +L G+++  D+ +       +   
Sbjct: 209 MTPNPTTIPATASLTQAALLMTEHDHKRLPVVDEAGRLVGMLSRSDLLQTVANTFASSSE 268

Query: 283 ----------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      +V +VMI++   +  +T L   +  +       ++VVD  ++ +GI+  
Sbjct: 269 VLPGSILTTAKTVGEVMIRDVPTVTPETPLAETLDRILSTPRRRVVVVDQNRRVVGIISD 328

Query: 333 LDLLR 337
            D+LR
Sbjct: 329 GDILR 333



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 33/68 (48%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R        L V DVM  +   +  +T +   ++LL +  +  + VVD  ++ IGIV  
Sbjct: 108 RRTGSALPAHLRVADVMNHDVISVTSETSVGELVRLLLERGLRAMPVVDAERRVIGIVTD 167

Query: 333 LDLLRFGI 340
            DLL+ G+
Sbjct: 168 ADLLQRGV 175


>gi|325968965|ref|YP_004245157.1| signal transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708168|gb|ADY01655.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 297

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 1/122 (0%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                       ++  +K    L DA  + +EK+   + ++D+  ++ G+IT  +I R +
Sbjct: 172 IPKVKVDALMSKNVITIKHDSLLKDAAKVFAEKKIRALPIIDDEGRIVGLITTSEIARAY 231

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++      V D   ++   I ++  L  AM+L+  + I  L+VV    K +GI+   D+L
Sbjct: 232 YEGNLNAKVGDYARRDVPTIDKEADLYDAMRLMTVNKIGRLIVV-SGGKPVGIITRTDIL 290

Query: 337 RF 338
           ++
Sbjct: 291 QY 292



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 41/94 (43%), Gaps = 14/94 (14%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +++EK  G   +V    KL  I                + V+ +M KN   I  D+LL  
Sbjct: 151 VITEKNEGLRELVVAINKLIAI--------------PKVKVDALMSKNVITIKHDSLLKD 196

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A ++  +  I  L ++DD  + +G++   ++ R 
Sbjct: 197 AAKVFAEKKIRALPIIDDEGRIVGLITTSEIARA 230



 Score = 36.0 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           ++   +P +     L DA+ +++  + G + VV  G K  GIIT  DI +   
Sbjct: 243 YARRDVPTIDKEADLYDAMRLMTVNKIGRLIVV-SGGKPVGIITRTDILQYLA 294


>gi|45357696|ref|NP_987253.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           S2]
 gi|45047256|emb|CAF29689.1| IMP dehydrogenase [Methanococcus maripaludis S2]
          Length = 500

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 71/182 (39%), Gaps = 14/182 (7%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +  +         P  SA M       LAIAL            V+H    +       
Sbjct: 37  DVSVDIAGLKLN-IPIISAAMDTVSEKDLAIALARRGGI-----AVIHRNMTVEEQLKHV 90

Query: 221 SDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             V  + + +      V+    ++DA  I+ E     + VV E + L GI+T  D+    
Sbjct: 91  KAVKMAENLVIRDVVTVEPSSSVLDAERIMYEYNVSGLPVVSENKTLVGILTTRDLKFVP 150

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDL 335
            K++   +VE VM K    + EDT     +  L ++ I  L ++D   K  +G+V   D+
Sbjct: 151 DKNV---AVETVMTKEVLHVHEDTPYEEILNRLYENKIERLPILDKNTKELLGMVTLRDI 207

Query: 336 LR 337
           L+
Sbjct: 208 LK 209


>gi|269798115|ref|YP_003312015.1| inosine-5'-monophosphate dehydrogenase [Veillonella parvula DSM
           2008]
 gi|269094744|gb|ACZ24735.1| inosine-5'-monophosphate dehydrogenase [Veillonella parvula DSM
           2008]
          Length = 484

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGGLG-----VIHKNMSIEEQAHEVDKVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  I+ + +   V +  E  KL GIIT  D+   F  DL+   + + 
Sbjct: 98  DPIFLSPQNLLSDAAEIMEKYKISGVPIT-EHGKLVGIITNRDMR--FETDLSR-QIGEC 153

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+      E T L  A  +L +H I  L +VD      G++   D+ + 
Sbjct: 154 MTKDSLVTAPEGTSLEAAKAILSEHRIEKLPLVDGDGNLKGLITIKDIEKA 204


>gi|159904890|ref|YP_001548552.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159886383|gb|ABX01320.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 137

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     +I++   L + +  C+ VV+E  +  GI+T  DI  N   D  TL  ++ +VM 
Sbjct: 20  VAPESGVIESFEALLKNKISCLPVVNENNETIGIVTTTDIGYNLIIDKYTLETTIAEVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   I +D     A++ +  H      I+ L VV+   K +GI+   D+LR 
Sbjct: 80  KNVVTISQDESAVDALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDILRA 132



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 32/59 (54%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K +  + ++D+M  +   +  ++ +  + + L ++ IS L VV++  + IGIV   D+
Sbjct: 1   MKKIREIVIKDIMSSDVVSVAPESGVIESFEALLKNKISCLPVVNENNETIGIVTTTDI 59



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  +      +DA+  +     G      + VV+   KL GI+++GDI R   K
Sbjct: 78  MTKNVVTISQDESAVDALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDILRAISK 135


>gi|227832961|ref|YP_002834668.1| putative signal-transduction protein [Corynebacterium aurimucosum
           ATCC 700975]
 gi|262182552|ref|ZP_06041973.1| putative signal-transduction protein [Corynebacterium aurimucosum
           ATCC 700975]
 gi|227453977|gb|ACP32730.1| putative signal-transduction protein [Corynebacterium aurimucosum
           ATCC 700975]
          Length = 622

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDE----GQKLKGIITEGDIF-RNFHKDLN-TLSVED 287
                + +A  +++E     + VV+      ++L GI+T+ D+  R      +    V +
Sbjct: 165 PAATTIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRDLRTRVLAAQRDPAAPVGE 224

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   P  +  D     A+  + +  I  L VV       GIV   D+ R 
Sbjct: 225 IMTPQPLTVSADAPAMEALLHMAERGIHHLPVV-KEGALQGIVTQSDVTRL 274



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V    P ++A+  ++E+    + VV +   L+GI+T+ D+ R  H D   L+ 
Sbjct: 226 MTPQPLTVSADAPAMEALLHMAERGIHHLPVV-KEGALQGIVTQSDVTRLLHNDPVYLAA 284

Query: 286 E 286
           +
Sbjct: 285 D 285



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 28/61 (45%), Gaps = 4/61 (6%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD----CQKAIGIVHFLD 334
           D+    + +++  +       T +  A  L+ +H +S L+VV+      ++  GI+   D
Sbjct: 147 DVLRTPLRELIRTDVLTAPAATTIREAALLMTEHGVSSLLVVESGEETDKRLTGILTDRD 206

Query: 335 L 335
           L
Sbjct: 207 L 207


>gi|258404842|ref|YP_003197584.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
 gi|257797069|gb|ACV68006.1| CBS domain containing protein [Desulfohalobium retbaense DSM 5692]
          Length = 227

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 54/122 (44%), Gaps = 12/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
               +  V     L++A   L +     + VVD   +L GI+T+ DI      R    D+
Sbjct: 7   MTTKVHTVAADATLMEASKTLKDYAIRRLPVVDSHGRLLGIVTDRDIKEASPSRATTLDI 66

Query: 281 NTL-------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + L       S++D+M  +P  +     +  A  L+R+H I  L VVDD    +GI+   
Sbjct: 67  HELYYLLSAISLQDIMTPSPVTVRARDTVGRAAILMRRHTIEGLPVVDDDNTVVGIITES 126

Query: 334 DL 335
           D+
Sbjct: 127 DI 128



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE+ M      +  D  L  A + L+ + I  L VVD   + +GIV   D+   
Sbjct: 3   VENWMTTKVHTVAADATLMEASKTLKDYAIRRLPVVDSHGRLLGIVTDRDIKEA 56


>gi|186477329|ref|YP_001858799.1| RpiR family transcriptional regulator [Burkholderia phymatum
           STM815]
 gi|184193788|gb|ACC71753.1| transcriptional regulator, RpiR family [Burkholderia phymatum
           STM815]
          Length = 278

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 7/172 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +      L  + ++L    S     A+E +   K RV   G G SG     +    
Sbjct: 93  AAKVLDRTIGALIQVRNNLS---SDSVAAAIELLANAK-RVEFYGAGGSGIAALDMQHKF 148

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G PS              ++   D+++ +S +G + ++      A +    +IA+T 
Sbjct: 149 FRLGMPSVAYSDPHTFLMSAALLGEGDVVVAISNTGRTRDIIDAARSAMKAGAKVIAVT- 207

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              S +A  A I L    + ++     +P TS    LAIGD LA+ +   R 
Sbjct: 208 HGNSPLARVASIGLFANVDEDTDIF--SPMTSRTSHLAIGDILAVGVALHRG 257


>gi|148558520|ref|YP_001257367.1| inosine 5'-monophosphate dehydrogenase [Brucella ovis ATCC 25840]
 gi|161620424|ref|YP_001594310.1| inositol-5-monophosphate dehydrogenase [Brucella canis ATCC 23365]
 gi|163844528|ref|YP_001622183.1| inosine 5'-monophosphate dehydrogenase [Brucella suis ATCC 23445]
 gi|254699626|ref|ZP_05161454.1| inosine 5'-monophosphate dehydrogenase [Brucella suis bv. 5 str.
           513]
 gi|254702749|ref|ZP_05164577.1| inosine 5'-monophosphate dehydrogenase [Brucella suis bv. 3 str.
           686]
 gi|254706117|ref|ZP_05167945.1| inosine 5'-monophosphate dehydrogenase [Brucella pinnipedialis
           M163/99/10]
 gi|254711584|ref|ZP_05173395.1| inosine 5'-monophosphate dehydrogenase [Brucella pinnipedialis
           B2/94]
 gi|254712181|ref|ZP_05173992.1| inosine 5'-monophosphate dehydrogenase [Brucella ceti M644/93/1]
 gi|254715251|ref|ZP_05177062.1| inosine 5'-monophosphate dehydrogenase [Brucella ceti M13/05/1]
 gi|254720570|ref|ZP_05182381.1| inosine 5'-monophosphate dehydrogenase [Brucella sp. 83/13]
 gi|256015134|ref|YP_003105143.1| inositol-5-monophosphate dehydrogenase [Brucella microti CCM 4915]
 gi|256029780|ref|ZP_05443394.1| inosine 5'-monophosphate dehydrogenase [Brucella pinnipedialis
           M292/94/1]
 gi|256059428|ref|ZP_05449630.1| inosine 5'-monophosphate dehydrogenase [Brucella neotomae 5K33]
 gi|256157953|ref|ZP_05455871.1| inosine 5'-monophosphate dehydrogenase [Brucella ceti M490/95/1]
 gi|256253088|ref|ZP_05458624.1| inosine 5'-monophosphate dehydrogenase [Brucella ceti B1/94]
 gi|260167114|ref|ZP_05753925.1| inosine 5'-monophosphate dehydrogenase [Brucella sp. F5/99]
 gi|260568344|ref|ZP_05838813.1| IMP dehydrogenase/GMP reductase [Brucella suis bv. 4 str. 40]
 gi|261216976|ref|ZP_05931257.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M13/05/1]
 gi|261220191|ref|ZP_05934472.1| inositol-5-monophosphate dehydrogenase [Brucella ceti B1/94]
 gi|261313555|ref|ZP_05952752.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           M163/99/10]
 gi|261319206|ref|ZP_05958403.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           B2/94]
 gi|261319846|ref|ZP_05959043.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M644/93/1]
 gi|261323394|ref|ZP_05962591.1| inositol-5-monophosphate dehydrogenase [Brucella neotomae 5K33]
 gi|261750089|ref|ZP_05993798.1| inositol-5-monophosphate dehydrogenase [Brucella suis bv. 5 str.
           513]
 gi|261753343|ref|ZP_05997052.1| inositol-5-monophosphate dehydrogenase [Brucella suis bv. 3 str.
           686]
 gi|261756512|ref|ZP_06000221.1| IMP dehydrogenase/GMP reductase [Brucella sp. F5/99]
 gi|265985604|ref|ZP_06098339.1| inositol-5-monophosphate dehydrogenase [Brucella sp. 83/13]
 gi|265986792|ref|ZP_06099349.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           M292/94/1]
 gi|265996462|ref|ZP_06109019.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M490/95/1]
 gi|294853347|ref|ZP_06794019.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|306838063|ref|ZP_07470920.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. NF 2653]
 gi|306840818|ref|ZP_07473565.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. BO2]
 gi|306845646|ref|ZP_07478215.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. BO1]
 gi|148369805|gb|ABQ62677.1| inosine-5'-monophosphate dehydrogenase [Brucella ovis ATCC 25840]
 gi|161337235|gb|ABX63539.1| inosine-5'-monophosphate dehydrogenase [Brucella canis ATCC 23365]
 gi|163675251|gb|ABY39361.1| inosine-5'-monophosphate dehydrogenase [Brucella suis ATCC 23445]
 gi|255997794|gb|ACU49481.1| inositol-5-monophosphate dehydrogenase [Brucella microti CCM 4915]
 gi|260155009|gb|EEW90090.1| IMP dehydrogenase/GMP reductase [Brucella suis bv. 4 str. 40]
 gi|260918775|gb|EEX85428.1| inositol-5-monophosphate dehydrogenase [Brucella ceti B1/94]
 gi|260922065|gb|EEX88633.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M13/05/1]
 gi|261292536|gb|EEX96032.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M644/93/1]
 gi|261298429|gb|EEY01926.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           B2/94]
 gi|261299374|gb|EEY02871.1| inositol-5-monophosphate dehydrogenase [Brucella neotomae 5K33]
 gi|261302581|gb|EEY06078.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           M163/99/10]
 gi|261736496|gb|EEY24492.1| IMP dehydrogenase/GMP reductase [Brucella sp. F5/99]
 gi|261739842|gb|EEY27768.1| inositol-5-monophosphate dehydrogenase [Brucella suis bv. 5 str.
           513]
 gi|261743096|gb|EEY31022.1| inositol-5-monophosphate dehydrogenase [Brucella suis bv. 3 str.
           686]
 gi|262550759|gb|EEZ06920.1| inositol-5-monophosphate dehydrogenase [Brucella ceti M490/95/1]
 gi|264658989|gb|EEZ29250.1| inositol-5-monophosphate dehydrogenase [Brucella pinnipedialis
           M292/94/1]
 gi|264664196|gb|EEZ34457.1| inositol-5-monophosphate dehydrogenase [Brucella sp. 83/13]
 gi|294819002|gb|EFG36002.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|306273967|gb|EFM55794.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. BO1]
 gi|306289213|gb|EFM60462.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. BO2]
 gi|306406800|gb|EFM63022.1| inosine-5''-monophosphate dehydrogenase [Brucella sp. NF 2653]
          Length = 497

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 105 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 162 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKGRCVGLVTVKDI 209


>gi|148656616|ref|YP_001276821.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568726|gb|ABQ90871.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 427

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 53/126 (42%), Gaps = 22/126 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           V+   P+ + + +L ++      VVD   ++ GIIT+GD+      +L            
Sbjct: 132 VRPDTPVAEIVALLIDRALRSAPVVDAENRVIGIITDGDLLTRGATELPLALQRELSLAE 191

Query: 281 ----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                     +  +  D+M  NP  + E T L  A  ++    +  + VVD  Q+ +G+V
Sbjct: 192 RAATIETLATHRHTAADLMTPNPVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMV 251

Query: 331 HFLDLL 336
              DLL
Sbjct: 252 SRSDLL 257



 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 30/141 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +P V+   PL + +  L E     V VVD  +++ GIIT+GD+ R   K +     
Sbjct: 286 MITDVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITDGDVMRRAAKRVRPGAL 345

Query: 282 ---------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                                  +  DVM      +  +  +  A++L+  H I  + ++
Sbjct: 346 RALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPTNAPIADAVRLMMAHKIKRIPII 405

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
           D   + +G+V      R G++
Sbjct: 406 DADGRLVGMVG-----RAGVL 421



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
              +   ++   PL +A  +++++    + VVD  Q+L G+++  D+     + L     
Sbjct: 210 MTPNPVTLRETTPLAEAAAVMADRGLKRIPVVDAQQRLVGMVSRSDLLATVAEGLRQRPA 269

Query: 283 ----------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      +V ++MI +   +  DT L   +  L + +   ++VVD  ++ +GI+  
Sbjct: 270 TPIRQPDGAPKTVGEIMITDVPTVQPDTPLAETLDRLLETDKRRVIVVDGERRVVGIITD 329

Query: 333 LDLLR 337
            D++R
Sbjct: 330 GDVMR 334



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 28/66 (42%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R        L+V DVM +    +  DT +   + LL    +    VVD   + IGI+   
Sbjct: 110 RAIGPFPAHLTVADVMTRQVVSVRPDTPVAEIVALLIDRALRSAPVVDAENRVIGIITDG 169

Query: 334 DLLRFG 339
           DLL  G
Sbjct: 170 DLLTRG 175


>gi|302671792|ref|YP_003831752.1| IMP dehydrogenase GuaB [Butyrivibrio proteoclasticus B316]
 gi|302396265|gb|ADL35170.1| IMP dehydrogenase GuaB [Butyrivibrio proteoclasticus B316]
          Length = 485

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA +++++ R   V +  EG+KL GIIT  D+   F KD  +  ++DV
Sbjct: 96  DPFSLSPEHTLADADSLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEKDF-SQKIKDV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N         L  A  +L +     L +VDD    +G++   D+
Sbjct: 152 MTSENLITAKAGITLEEAKSILAKSKKEKLPIVDDDYNLVGLITIKDI 199


>gi|315231806|ref|YP_004072242.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP]
 gi|315184834|gb|ADT85019.1| inosine-5'-monophosphate dehydrogenase [Thermococcus barophilus MP]
          Length = 485

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 15/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP- 231
             P  SA M       +A+A+            V+H    +G        V  +   I  
Sbjct: 47  NIPILSAAMDTVTEWEMAVAMAREGGLG-----VIHRNMSIGEQVEMVKKVKKAERFIIE 101

Query: 232 ---LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L  A+ ++ +     + V+ +  K+ GI+++ DI            V+D+
Sbjct: 102 DVITISPDETLDYALFLMEKHDIDGLPVI-KDGKVVGIVSKKDI-----AAKEGQKVKDI 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K    + ED  +  AM+++ ++ I  L VV+   K IG++   DL+
Sbjct: 156 MTKEVITVEEDISVEEAMKIMVKNRIDRLPVVNKKGKLIGLITMSDLV 203


>gi|332140457|ref|YP_004426195.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str.
           'Deep ecotype']
 gi|327550479|gb|AEA97197.1| inositol-5-monophosphate dehydrogenase [Alteromonas macleodii str.
           'Deep ecotype']
          Length = 489

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +         +  +    S V+      
Sbjct: 41  NIPMVSAAMDTVSEARLAIALAQEGGIGFIHKNMKPEEQAKHVREVKKYESGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I++     +    V D+   L GI+T  D+   F K L  L + +VM 
Sbjct: 98  VTVDKDATIGDVISLSKRLGYSGFPVTDKDNNLIGIVTGRDLR--FEKRL-ELPISNVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E     V + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 GKDDLVTVKEGASSDVVLDLMHEHRIEKILVVDDAFKLTGLITVKDFQKA 204


>gi|297162511|gb|ADI12223.1| hypothetical protein SBI_09105 [Streptomyces bingchenggensis BCW-1]
          Length = 223

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D +  V  G  L +   +L+  R G + VVDE +K+ G+++  D+           + 
Sbjct: 10  MTDDVVRVGSGASLHEVGELLARHRIGGLPVVDEDEKVVGVVSGADLR----TGSAARTA 65

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M +    +     +  A + + +H +  L V+D+  + +GIV   DLL
Sbjct: 66  GQLMSRPAVTVRPQDSVVDAARTMARHGVERLPVIDEEDRLVGIVTRRDLL 116



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    + +VM  +   +     L    +LL +H I  L VVD+ +K +G+V   DL
Sbjct: 1   MKHRKIGNVMTDDVVRVGSGASLHEVGELLARHRIGGLPVVDEDEKVVGVVSGADL 56



 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 31/79 (39%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  L T     +           V+    ++DA   ++      + V+DE  +L GI+T 
Sbjct: 53  GADLRTGSAARTAGQLMSRPAVTVRPQDSVVDAARTMARHGVERLPVIDEEDRLVGIVTR 112

Query: 270 GDIFRNFHKDLNTLSVEDV 288
            D+   F +  + +  E +
Sbjct: 113 RDLLGVFLRPDHEIRAEVI 131


>gi|308235420|ref|ZP_07666157.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis ATCC
           14018]
 gi|311114827|ref|YP_003986048.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis ATCC
           14019]
 gi|310946321|gb|ADP39025.1| inosine-5'-monophosphate dehydrogenase [Gardnerella vaginalis ATCC
           14019]
          Length = 514

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S +D        +   + +       
Sbjct: 56  KVPAISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 107

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L D   +        + VVD   +L GIIT  D+     +D + L V
Sbjct: 108 MITDPLTVHPDATLADLDKLCGRFHISGLPVVDSENRLVGIITNRDMRFIASEDYDRLKV 167

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +DVM + N      +     A +LL  + +  L +VD   K  G++   D ++
Sbjct: 168 KDVMTRENLVTGPSNISKEDAHRLLADNKVEKLPLVDAEGKLTGLITVKDFVK 220


>gi|303247748|ref|ZP_07334017.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
 gi|302490832|gb|EFL50731.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
          Length = 218

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 12/115 (10%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTL 283
              +I A  ++ E +   + VVD+  KL GI++E D+      D            L+ +
Sbjct: 17  DVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDLKAASPSDATSLDMYELTYLLSEM 76

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+++M K+P+ I     +  A  ++R   I  L V+D   K +GI+   D+ R 
Sbjct: 77  KVKNIMTKSPRFIRPTDTVERAALIMRDLKIGSLPVIDADGKVLGIITDTDIFRL 131



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M +N      D  +  A +++R+H I  L VVD   K IGIV   DL
Sbjct: 3   VGDWMSRNVVTATGDVSMIKAGRMMREHKIRRLPVVDKDGKLIGIVSERDL 53



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              S   ++    +  A  I+ + + G + V+D   K+ GIIT+ DIFR F
Sbjct: 82  MTKSPRFIRPTDTVERAALIMRDLKIGSLPVIDADGKVLGIITDTDIFRLF 132


>gi|297564581|ref|YP_003683553.1| putative signal transduction protein with CBS domains [Meiothermus
           silvanus DSM 9946]
 gi|296849030|gb|ADH62045.1| putative signal transduction protein with CBS domains [Meiothermus
           silvanus DSM 9946]
          Length = 143

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     + +A+  +++   G + V+ E  +L GI +E D  R      +      V +VM
Sbjct: 19  IHPQATVYEALERMAQHDVGALLVL-EEGQLVGIFSERDYARKIILMGRASRDTPVHEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   +  +  +   M L+ QH I  L V+ +  +  G++   D+++ 
Sbjct: 78  TTDLVTVSPEATVGECMALMTQHRIRHLPVM-EGGRLAGVISIGDVVKA 125



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/144 (14%), Positives = 51/144 (35%), Gaps = 9/144 (6%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-FSEN 202
           +T+  + ++      V  +  +              + Q  +G  L +   +    FSE 
Sbjct: 1   MTATVRQLLQVKGSRVFDIHPQATVY-----EALERMAQHDVGALLVLEEGQLVGIFSER 55

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+        +G               +  V     + + + ++++ R   + V+ EG +
Sbjct: 56  DYA--RKIILMGRASRDTPVHEVMTTDLVTVSPEATVGECMALMTQHRIRHLPVM-EGGR 112

Query: 263 LKGIITEGDIFRNFHKDLNTLSVE 286
           L G+I+ GD+ +    +   L  +
Sbjct: 113 LAGVISIGDVVKAIMTEQEFLIAQ 136


>gi|239929428|ref|ZP_04686381.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291437754|ref|ZP_06577144.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291340649|gb|EFE67605.1| inosine 5' monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 500

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTESRMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V
Sbjct: 101 MVTDPITVHPDATLAEADALCAKFRISGVPVTDGNGKLLGIVTNRDM--AFETD-RSRQV 157

Query: 286 EDVMIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V          AM LLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 REVMTPMPLVTGTVGISGPDAMGLLRRHKIEKLPLVDDEGVLKGLITVKDFVKA 211


>gi|15678170|ref|NP_275285.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2621183|gb|AAB84648.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 484

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 66/168 (39%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+ +          V+H    +         V  SGD    
Sbjct: 45  KIPVISSAMDTVTEYDMAIAMAQEGG-----MGVIHRNMSIRDQVEQVKKVKRSGDITIR 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  I+ ++    + VV E   L GII+  DI   F+ D +   V+ V
Sbjct: 100 DVITISPDSTLREAHEIMDQEEISGLPVV-EDGVLIGIISRRDIEPIFNSDADK-KVDQV 157

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++   + E      A+ +  ++ +  L VV    + +G++   D+L
Sbjct: 158 MTRDVVTVDESITPNEALDIAYENKVERLPVV-KDGRIVGMLTMKDIL 204



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 13/141 (9%)

Query: 198 NFSENDFYVLHPGGKLG-TLFVCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCV 254
            ++ +DF +L     +       A  V  + +    V       + +    ++  + G +
Sbjct: 12  GYTFDDFLLLPQASYVEPRDVETAGRVSRNIELKIPVISSAMDTVTEYDMAIAMAQEGGM 71

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            V+              I     +        D+ I++   I  D+ L  A +++ Q  I
Sbjct: 72  GVIHRNMS---------IRDQVEQVKKVKRSGDITIRDVITISPDSTLREAHEIMDQEEI 122

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           S L VV +    IGI+   D+
Sbjct: 123 SGLPVV-EDGVLIGIISRRDI 142


>gi|229027859|ref|ZP_04184017.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1271]
 gi|229170861|ref|ZP_04298466.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus MM3]
 gi|228612596|gb|EEK69813.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus MM3]
 gi|228733451|gb|EEL84275.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH1271]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEKLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|225020532|ref|ZP_03709724.1| hypothetical protein CORMATOL_00539 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305680119|ref|ZP_07402929.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium matruchotii
           ATCC 14266]
 gi|224946662|gb|EEG27871.1| hypothetical protein CORMATOL_00539 [Corynebacterium matruchotii
           ATCC 33806]
 gi|305660739|gb|EFM50236.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium matruchotii
           ATCC 14266]
          Length = 506

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/209 (19%), Positives = 76/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + LI +T ++  ++   +D++   +T   +         P  SA M       +A+A+
Sbjct: 14  NKVALIGLTFDDVLLLPDASDVIPSEVTTTTQLTRNISLNIPIVSAAMDTVTEARMAVAM 73

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       VLH    +         V  S                + +   + ++ 
Sbjct: 74  AREGGLG-----VLHRNLSIEEQAQNVEIVKRSESGMVTDPITCSPDMTIAEVDALCAKY 128

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQL 308
           R   + VVDE   L GI T  D+   F  D  +  V ++M   P  +  +      A++L
Sbjct: 129 RISGLPVVDEAGTLVGICTNRDMR--FEAD-YSRKVSEIMTPMPLFVAPEGVTKEAALEL 185

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +V    K +G++   D ++
Sbjct: 186 LSAHKVEKLPIVSANNKLVGLITVKDFVK 214


>gi|23500105|ref|NP_699545.1| inosine 5'-monophosphate dehydrogenase [Brucella suis 1330]
 gi|23463698|gb|AAN33550.1| inosine-5'-monophosphate dehydrogenase [Brucella suis 1330]
          Length = 497

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 105 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 162 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKGRCVGLVTVKDI 209


>gi|303256268|ref|ZP_07342284.1| CBS domain protein [Burkholderiales bacterium 1_1_47]
 gi|302860997|gb|EFL84072.1| CBS domain protein [Burkholderiales bacterium 1_1_47]
          Length = 151

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
           S  ++  + +G  ++D    +     G + V+++ ++  G+IT+ DI        KD   
Sbjct: 12  SVHTVATIPLGTSVLDCSKAMRALHVGSLVVINDDRQPVGMITDRDICIEVVALEKDPKG 71

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L VEDVM         D  +  A+  +R+  I  L VVD   K  GIV   +++  
Sbjct: 72  LKVEDVMSAPVCTASADETVVDALARMREQGIRRLPVVDKDDKLCGIVTANNIVEE 127



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
               +        ++DA+  + E+    + VVD+  KL GI+T  +I     + L++
Sbjct: 78  MSAPVCTASADETVVDALARMREQGIRRLPVVDKDDKLCGIVTANNIVEEISEQLDS 134


>gi|114562315|ref|YP_749828.1| inositol-5-monophosphate dehydrogenase [Shewanella frigidimarina
           NCIMB 400]
 gi|114333608|gb|ABI70990.1| inosine-5'-monophosphate dehydrogenase [Shewanella frigidimarina
           NCIMB 400]
          Length = 488

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  +    + ++      
Sbjct: 41  NIPLVSAAMDTVTESRLAIAMAQEGGLGFIHKNMSIEQQAEEVRKVKSYEAGIV---QDP 97

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     L D + +L+E   F    VV++  +L GIIT  D+   F  D +  +V D+M
Sbjct: 98  VTVTPTTSLTD-LRLLTEHNGFAGYPVVNDAHELVGIITGRDVR--FVTDWSK-TVADMM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L    +L+  H I  ++VVD   K  G+V   D  + 
Sbjct: 154 TPKDRLVTVTEGTKLDEVQKLMHSHRIEKVLVVDKNFKLKGLVTVKDFEKA 204


>gi|127512229|ref|YP_001093426.1| inositol-5-monophosphate dehydrogenase [Shewanella loihica PV-4]
 gi|126637524|gb|ABO23167.1| inosine-5'-monophosphate dehydrogenase [Shewanella loihica PV-4]
          Length = 488

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    + 
Sbjct: 41  NMPIVSAAMDTVTEARLAIAMAQEGGIGFIHKNMSIEQQAEQVRQVKIYEAGIVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     L + + +L+EK  F    VVDE  +L GIIT  D+   F  D +  +V+ VM
Sbjct: 100 --VTPNTTL-EQLKVLTEKNGFAGYPVVDEANELVGIITGRDVR--FITDWSR-TVDQVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L    +L+  H +  ++VVD   +  G++   D  + 
Sbjct: 154 TPKERLVTVPEGTPLDEVQKLMHAHRVEKVLVVDGDFRLKGLITVKDFQKA 204



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 26/62 (41%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 VM   + +  V  G PL +   ++   R   V VVD   +LKG+IT  D  +  
Sbjct: 146 SRTVDQVMTPKERLVTVPEGTPLDEVQKLMHAHRVEKVLVVDGDFRLKGLITVKDFQKAE 205

Query: 277 HK 278
            K
Sbjct: 206 EK 207


>gi|332364155|gb|EGJ41932.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK49]
          Length = 507

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 114 DPFFLTPDHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 170

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 171 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 220


>gi|282850342|ref|ZP_06259721.1| inosine-5'-monophosphate dehydrogenase [Veillonella parvula ATCC
           17745]
 gi|294791986|ref|ZP_06757134.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. 6_1_27]
 gi|294793850|ref|ZP_06758987.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. 3_1_44]
 gi|282579835|gb|EFB85239.1| inosine-5'-monophosphate dehydrogenase [Veillonella parvula ATCC
           17745]
 gi|294455420|gb|EFG23792.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. 3_1_44]
 gi|294457216|gb|EFG25578.1| inosine-5'-monophosphate dehydrogenase [Veillonella sp. 6_1_27]
          Length = 484

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGGLG-----VIHKNMSIEEQAHEVDKVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + +   V +  E  KL GIIT  D+   F  DL+   + + 
Sbjct: 98  DPIFLSPQNLLSDAAELMEKYKISGVPIT-EHGKLVGIITNRDMR--FETDLSR-QIGEC 153

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+      E T L  A  +L +H I  L +VD      G++   D+ + 
Sbjct: 154 MTKDSLVTAPEGTSLEAAKAILSEHRIEKLPLVDGDGNLKGLITIKDIEKA 204


>gi|301113386|ref|XP_002998463.1| myosin-like protein [Phytophthora infestans T30-4]
 gi|262111764|gb|EEY69816.1| myosin-like protein [Phytophthora infestans T30-4]
          Length = 3298

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 58/333 (17%), Positives = 111/333 (33%), Gaps = 34/333 (10%)

Query: 19   MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI------TGI 72
            M N      ++++I E      +E       +  F  + +     KG +V+       GI
Sbjct: 2106 MVNKMFSPDIKTVIEE----EGVEPPRVQRFTSVFEVSKQMAVTKKGALVVNNRGQFCGI 2161

Query: 73   GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
                 +  K+ +     G P       E       M+ +D  I     +G++  + A+  
Sbjct: 2162 FTPKEMLEKVLAR----GLPVHTTPVCEV------MLEKDVTI-----NGATSVIDAMHT 2206

Query: 133  YARRFSIPLIAI-TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
                 ++ L  + T  +K  +     + L+     +  P       +A  +    D ++ 
Sbjct: 2207 MHDHKTLYLAVMQTETSKQPIGLIDVLSLSYGSFAKGKPSERKSFWNASFEATDDDDVSS 2266

Query: 192  ALLESRNFS----ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITIL 246
                   FS     +   +   G +          V     S  + +     + DA   +
Sbjct: 2267 QHSFRSGFSHNLAPSSSGLSQKGRQAALATGNVRPVSKLRPSKAITISETFSVADAAKEM 2326

Query: 247  SEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            S  +     V+     L GI+T+ D+ R       D   +SV D M  +PK + E     
Sbjct: 2327 SNAQTDAALVIGRDGGLLGILTDTDVTRRVVALGNDPFYVSVCDAMTPDPKFVDERDSAM 2386

Query: 304  VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             AM ++ +     L VVD+     G++     L
Sbjct: 2387 DAMFMMLEGKFRHLPVVDETGMVAGMLRIQKCL 2419



 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)

Query: 240  IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVI 296
             +    +   +  CV VV E   L GIIT+ D+ R     ++ +++  V DVM +NP  +
Sbjct: 1962 AELSRTMGRNKMDCVLVVSEEGMLNGIITDTDLTRRVVSENRPVDSTLVGDVMTRNPVFV 2021

Query: 297  LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              D     A+  + +     L VV+     +GI++ 
Sbjct: 2022 SMDDPAIDALISMLEGKFRHLPVVERNGPVVGILNI 2057



 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)

Query: 237  CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNP 293
              + +A  ++ +KR   + VVDE   L GI+T+ DI  R    +LN   + V +VM ++ 
Sbjct: 1616 ASVFEASLLMKQKRTDALLVVDEAGGLNGILTDTDICRRVLALNLNPEEVPVCNVMTRDI 1675

Query: 294  KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            K +  +     A+  +++ +   L VVD      G+++ 
Sbjct: 1676 KYVSPNDSAIDALLSMQEGHFRHLPVVD-GGSIAGVLNI 1713



 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 8/113 (7%)

Query: 233  VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
            V     +++A  ++   R   V V +    L GI ++ D  R       D   +++  VM
Sbjct: 1273 VNQEATVLEAARLMKSHRSAAVLVTNWEGALTGIFSDTDAARRVISKGMDPARVTIGSVM 1332

Query: 290  IKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVH----FLDLLR 337
              NP  +  +     AM ++       L VV       +G+++      D +R
Sbjct: 1333 TPNPSCVSLEDSAVDAMDIMLSGKFRHLPVVSAHSGNIVGVLNVAKCLHDAIR 1385



 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 3/109 (2%)

Query: 227  GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TL 283
               +  +     + +A   + + R   V V  E  +L+GI+T+ DI  R   +D++  + 
Sbjct: 2706 PQEVTRINEFITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITRRVLAEDIDPESC 2765

Query: 284  SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            SV  VM   P  +  +     A+  + +     L V+       G++  
Sbjct: 2766 SVASVMTTKPMCVYMEDQAIEAITKMLEGRFKHLPVLGSDGTPQGMLDI 2814



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 49/146 (33%), Gaps = 32/146 (21%)

Query: 217  FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---------------- 260
                  ++      PLV     +++    ++  R   + V D                  
Sbjct: 2470 SPTVDQILEDETLPPLVSEHDTVMEVARQMAASRKAALIVEDPNADNSSSVSGGHRSSIS 2529

Query: 261  ------------QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVA 305
                        +K+ G+ T  D+         D    +V  VM  +P+    +T L  A
Sbjct: 2530 GGGYDIGTSALTRKVLGVFTPKDLLLRVTGAGLDAAETTVGQVMTPDPETAPPNTRLVDA 2589

Query: 306  MQLLRQHNISVLMVVDDC-QKAIGIV 330
            + ++ +HN   L VV++     +G++
Sbjct: 2590 LHIMYEHNFLHLPVVNNETATIVGML 2615



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 229  SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGD-IFRNFHKDL--NTL 283
              PLV     + +A T ++E R   + V    +   L GI T  D + R   +DL  +T 
Sbjct: 1430 MSPLVYGNMTVYEATTYMAESRRPALVVSSNPEAPDLIGIFTPKDVLLRVVAEDLDVHTT 1489

Query: 284  SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGI 329
             V DVM  NP+    +T +  A  ++       L VV  D  + +G+
Sbjct: 1490 PVSDVMTPNPESAAPETSVLDAFHIMHDGKFLNLPVVAPDSGEILGV 1536



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 229  SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLS--- 284
              P +     + D    ++  +   + V D    KL G+ +  ++  N        S   
Sbjct: 1777 PAPRLPKSSLVSDVAKAMASTKKAALIVDDINFDKLVGVFSPNELVLNVIAKGLKASATY 1836

Query: 285  VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDL 335
            VE+VM+ +P++    T +   + ++    I  L V+ DD  + +G+V  LDL
Sbjct: 1837 VEEVMLNDPEIATPSTSVLDGLHIMHDSRILNLPVLKDDSNELVGMVDVLDL 1888



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 217  FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 D +      P+V I      A  +++  +     V+ + Q+L G++T  D+ R  
Sbjct: 2862 RPTVGDALDGEIMPPVVNIHTTAARAAKLMANTK-KAAIVLGDEQELCGMVTTKDLLRKL 2920

Query: 277  -HKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              K L   T +VE+VM  +P ++  D  +   ++ L       + V+ D  + +G+
Sbjct: 2921 VAKGLYAETTTVEEVMTVDPDLMGPDMSIVDGLRSLHDAGQLFMPVLADDGEILGM 2976



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 58/180 (32%), Gaps = 46/180 (25%)

Query: 199  FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
             ++ D         +       + VM +      V +    I+AIT + E RF  + V+ 
Sbjct: 2746 LTDTDITRRVLAEDIDPESCSVASVMTTKPMC--VYMEDQAIEAITKMLEGRFKHLPVLG 2803

Query: 259  EGQKLKGII--------------------------------TEGDIFRNFHKDLNTL--- 283
                 +G++                                T  ++ R     +  +   
Sbjct: 2804 SDGTPQGMLDISKCLYDAITCLEKVQQSTEAAASEFSRDLGTGSNLQRLLGPMMEKMVRP 2863

Query: 284  SVED-----VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V D     +M   P V+   T    A +L+        +V+ D Q+  G+V   DLLR 
Sbjct: 2864 TVGDALDGEIM---PPVVNIHTTAARAAKLMANTK-KAAIVLGDEQELCGMVTTKDLLRK 2919



 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 294  KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I E   +  A  L++Q     L+VVD+     GI+   D+ R
Sbjct: 1610 ITIDEVASVFEASLLMKQKRTDALLVVDEAGGLNGILTDTDICR 1653



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 294  KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I E   +  A + +RQ  +  ++V  +  +  GI+   D+ R
Sbjct: 2710 TRINEFITVAEAAKRMRQARVEAVVVTTEEGELRGILTDTDITR 2753


>gi|229159187|ref|ZP_04287213.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus R309803]
 gi|228624268|gb|EEK81068.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus R309803]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|269959149|ref|YP_003328938.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
           Israel]
 gi|269848980|gb|ACZ49624.1| inosine-5'-monophosphate dehydrogenase [Anaplasma centrale str.
           Israel]
          Length = 493

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAI++ +           +H    +         V         
Sbjct: 42  RIPIMSAAMDTVTESRLAISVAQHGG-----MGCIHKNLSIERQVAEVQKVKKHESWIVS 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L  A++++ +  +  + VV  +  KL GI+T  D+    +K+     V D
Sbjct: 97  NPVTVSPDATLSTALSVMRKHSYSGIPVVTPQQNKLVGILTNRDVRFVENKNC---KVSD 153

Query: 288 VMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E    + A +LL +H I  L+V D+    IG++   D+ RF
Sbjct: 154 IMTSTNLVTVCEGISQSEATRLLHKHKIERLIVTDEHGCCIGLITVKDIERF 205


>gi|331699099|ref|YP_004335338.1| inosine-5'-monophosphate dehydrogenase [Pseudonocardia
           dioxanivorans CB1190]
 gi|326953788|gb|AEA27485.1| inosine-5'-monophosphate dehydrogenase [Pseudonocardia
           dioxanivorans CB1190]
          Length = 501

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 54/163 (33%), Gaps = 5/163 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+  +          L P  +   + V              
Sbjct: 49  QVPVVSSPMDTVTESRMAIAMARAGGLGVLH-RNLSPDEQAAQVEVVKRSEAGMVTDPVT 107

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
                 L +   + ++ R   V V D   KL GIIT  D+        +   V +VM   
Sbjct: 108 CSPDATLAEVDALCAKYRISGVPVADADGKLVGIITNRDMRFEVD---HGRPVHEVMTPA 164

Query: 293 P-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           P            A+ LLR+H +  L ++D      G++   D
Sbjct: 165 PLVTARVGVTAEAALGLLRRHKLEKLPIIDGDGILRGLITIKD 207



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 6/72 (8%)

Query: 270 GDIFRNFHKDLNTLSVEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           G + RN   D     VE V      M+ +P     D  L     L  ++ IS + V D  
Sbjct: 76  GVLHRNLSPDEQAAQVEVVKRSEAGMVTDPVTCSPDATLAEVDALCAKYRISGVPVADAD 135

Query: 324 QKAIGIVHFLDL 335
            K +GI+   D+
Sbjct: 136 GKLVGIITNRDM 147


>gi|227494839|ref|ZP_03925155.1| IMP dehydrogenase [Actinomyces coleocanis DSM 15436]
 gi|226831291|gb|EEH63674.1| IMP dehydrogenase [Actinomyces coleocanis DSM 15436]
          Length = 504

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 59/173 (34%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        +   + +       
Sbjct: 46  RIPMISAAMDTVTEARMAIAMARQGGIGILHRNLSIED--------QAEQVRLVKRSESG 97

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    +     + +   +    R   + VVD   KL GIIT  D+     ++ +T  V
Sbjct: 98  MVNDPVTIHADATIEELDRLCGRYRVSGLPVVDADNKLLGIITNRDLRFVPTEEWSTRRV 157

Query: 286 EDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D M   P            A  LL  + I  L +VDD  +  G++   D ++
Sbjct: 158 SDCMTPMPLITGHVGISREEAKALLATNRIEKLPLVDDEGRLAGLITVKDFVK 210


>gi|182436550|ref|YP_001824269.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326777173|ref|ZP_08236438.1| inosine-5'-monophosphate dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
 gi|178465066|dbj|BAG19586.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           griseus subsp. griseus NBRC 13350]
 gi|326657506|gb|EGE42352.1| inosine-5'-monophosphate dehydrogenase [Streptomyces cf. griseus
           XylebKG-1]
          Length = 500

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  T  V
Sbjct: 101 MVTDPITVHPDATLGEADALCAKFRISGVPVTDAAGKLLGIVTNRDM--AFESD-RTRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V          AM+LLR+H I  L +VDD     G++   D  + 
Sbjct: 158 REVMTPMPLVTGRVGISGVEAMELLRRHKIEKLPLVDDAGILKGLITVKDFKKA 211


>gi|58337960|ref|YP_194545.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227902871|ref|ZP_04020676.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
 gi|58255277|gb|AAV43514.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227869387|gb|EEJ76808.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
          Length = 284

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 4/179 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H       +     ++    R  S++E++  G        AV KI      +++ G G S
Sbjct: 84  HEFDAGEGIAAIKNTMA--ARFESAIEATQSGLNDNSVEKAVRKIYNSSS-ILVYGAGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G + S +       G    ++     +   L   T DDL+I++S  G + E+  I   A 
Sbjct: 141 GIVASDMYQKFMRVGKNINYISDLHVALAQLASFTSDDLLILISNDGKTTEVSDIQKVAD 200

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +F IP + +T+  +S VA  AD+VL L ++          TTS I Q+ + D L  + +
Sbjct: 201 KFGIPTLLLTANPRSFVAKKADLVL-LTQDIGEPSIRSGATTSLISQMFVVDVLVFSYV 258


>gi|6705995|dbj|BAA89464.1| IMPDH [Bacillus cereus]
          Length = 509

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLDEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|229053859|ref|ZP_04195296.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH603]
 gi|229131020|ref|ZP_04259936.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|229165002|ref|ZP_04292800.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH621]
 gi|228618454|gb|EEK75481.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH621]
 gi|228652432|gb|EEL08353.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST196]
 gi|228721469|gb|EEL72986.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH603]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|228912751|ref|ZP_04076400.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228925266|ref|ZP_04088364.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228834380|gb|EEM79919.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228846878|gb|EEM91881.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|229009523|ref|ZP_04166752.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides DSM 2048]
 gi|228751734|gb|EEM01531.1| Inosine-5'-monophosphate dehydrogenase [Bacillus mycoides DSM 2048]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|229074073|ref|ZP_04207122.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock4-18]
 gi|229094733|ref|ZP_04225741.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-29]
 gi|229100799|ref|ZP_04231617.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-28]
 gi|229113687|ref|ZP_04243124.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock1-3]
 gi|228669753|gb|EEL25158.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock1-3]
 gi|228682606|gb|EEL36665.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-28]
 gi|228688671|gb|EEL42541.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-29]
 gi|228709036|gb|EEL61160.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock4-18]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|65317475|ref|ZP_00390434.1| COG0516: IMP dehydrogenase/GMP reductase [Bacillus anthracis str.
           A2012]
 gi|118475786|ref|YP_892937.1| inosine 5'-monophosphate dehydrogenase [Bacillus thuringiensis str.
           Al Hakam]
 gi|228931515|ref|ZP_04094423.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228943819|ref|ZP_04106206.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229089144|ref|ZP_04220428.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-42]
 gi|229119675|ref|ZP_04248938.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus 95/8201]
 gi|229182407|ref|ZP_04309660.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|118415011|gb|ABK83430.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis str.
           Al Hakam]
 gi|228601053|gb|EEK58620.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BGSC 6E1]
 gi|228663766|gb|EEL19343.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus 95/8201]
 gi|228694185|gb|EEL47864.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-42]
 gi|228815843|gb|EEM62077.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228828133|gb|EEM73859.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
          Length = 492

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|147919879|ref|YP_686370.1| hypothetical protein RCIX1866 [uncultured methanogenic archaeon
           RC-I]
 gi|110621766|emb|CAJ37044.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 324

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                   L + A         +  V     L DAI+++  +  G + V+DE +++ GI+
Sbjct: 115 RKYDGNMILAINAPVTEIMQYDVVTVSDESSLEDAISLMISRSVGGLPVIDEERRIVGIL 174

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           TE D+ R     +    V D+M +       D  +  A +++   +   L V        
Sbjct: 175 TERDVVRIMGDAVVGRKVSDIMSRQVTTAPPDMTIEEAARMMVSSDFRRLPVT-AGNLVC 233

Query: 328 GIVHFLDLLRF 338
           GI+   D++R+
Sbjct: 234 GIITATDIMRY 244



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 40/116 (34%), Gaps = 15/116 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------L 280
                + +A  ++    F  + V   G  + GIIT  DI R                   
Sbjct: 204 PPDMTIEEAARMMVSSDFRRLPVT-AGNLVCGIITATDIMRYLGSGDAFRKLVTGNVHEA 262

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  +M  +   I  D  L    Q++ ++ I  + V+D      GIV   D++
Sbjct: 263 MGAPISSIMKTDILTIRSDEDLGGVAQIMARNRIGCMPVIDSSG-LTGIVTEHDIV 317


>gi|159044195|ref|YP_001532989.1| inosine-5'-monophosphate dehydrogenase [Dinoroseobacter shibae DFL
           12]
 gi|157911955|gb|ABV93388.1| inosine-5'-monophosphate dehydrogenase [Dinoroseobacter shibae DFL
           12]
          Length = 484

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         VLH    +         V         
Sbjct: 39  NIPLLSSAMDTVTEWRMAIAMAQAGG-----MGVLHRNLSIDEQQRQVRQVKRFESGVVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  ++   +     VVDE +++ GI+T  D+        +   V  +
Sbjct: 94  NPVTLRPDQTLADAKALMERYKITGFPVVDEQRRVLGIVTNRDMRFASD---DNTPVSVM 150

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +   I  E   L  A  L+    I  L+V+D   K  G++   D+ + 
Sbjct: 151 MTADNLAILREPADLAEAKSLMHARRIEKLLVLDGDGKLTGLLTIKDIEQA 201


>gi|167629951|ref|YP_001680450.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
           modesticaldum Ice1]
 gi|167592691|gb|ABZ84439.1| tRNA nucleotidyltransferase/poly(a) polymerase [Heliobacterium
           modesticaldum Ice1]
          Length = 891

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 54/123 (43%), Gaps = 2/123 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           T+             +  +     + DA  ++       + VV EG +L G+I+  D  +
Sbjct: 303 TIRPQRGAREIMSSPVKTITPDTTVDDAGKVMLRYGHTGLPVV-EGDRLVGVISRRDFDK 361

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   L    V+  M +N   I  DT L    +LL +H+I  L V+++  K +GIV   D
Sbjct: 362 AYIHGLRHAPVKGFMSRNVITITPDTSLRHIQRLLIEHDIGRLPVLEE-GKLVGIVSRTD 420

Query: 335 LLR 337
           +LR
Sbjct: 421 VLR 423



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 267 ITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +T   + R+ +  +       ++M    K I  DT +  A +++ ++  + L VV +  +
Sbjct: 291 LTLEQLVRSLYDTIRPQRGAREIMSSPVKTITPDTTVDDAGKVMLRYGHTGLPVV-EGDR 349

Query: 326 AIGIVHFLDLLRF 338
            +G++   D  + 
Sbjct: 350 LVGVISRRDFDKA 362



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 35/95 (36%), Gaps = 12/95 (12%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           +  GD L + ++  R+F +   + L      G +                +     L   
Sbjct: 344 VVEGDRL-VGVISRRDFDKAYIHGLRHAPVKGFMSRNVIT----------ITPDTSLRHI 392

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             +L E   G + V+ E  KL GI++  D+ R  H
Sbjct: 393 QRLLIEHDIGRLPVL-EEGKLVGIVSRTDVLRTLH 426


>gi|125719148|ref|YP_001036281.1| inosine 5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK36]
 gi|125499065|gb|ABN45731.1| Inosine-5'-monophosphate dehydrogenase, putative [Streptococcus
           sanguinis SK36]
          Length = 493

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 157 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDNGCLSGLITIKDI 206


>gi|23098068|ref|NP_691534.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
 gi|22776293|dbj|BAC12569.1| transcriptional regulator [Oceanobacillus iheyensis HTE831]
          Length = 282

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 71/171 (41%), Gaps = 6/171 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + +   K  + S+ SS+  +       AV  ++    +++  G+G S            
Sbjct: 99  QQVVHVNKMAIESMLSSIDRK---ALDKAVNLLQQA-NQILFFGVGGSSTAAYDGYYKFT 154

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G               +  + + D++I +S SG + ++  +   A+R  + +IAIT+ 
Sbjct: 155 RLGYACTAPQDFHLMLSTIPYLKKTDVLIAISMSGKTKDVVDLAEVAKRSGVTVIAITNL 214

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +KS +   ADI L  P        G  P  S + QL + DAL +++  S+ 
Sbjct: 215 DKSPLYKVADIHLCTPTVEHDFRIGSIP--SRMTQLTVIDALYLSIFHSKG 263


>gi|332796580|ref|YP_004458080.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332694315|gb|AEE93782.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 276

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +   +  +V     +++AITI+  + FG + VVD+  +  GI+TE ++  +F        
Sbjct: 79  YMTPNPAVVNEKDDILEAITIMVTRNFGSLPVVDDLGRPTGIVTEREMLLSFQDLEVLFP 138

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V   M K    I +D  L  A + +       L VVD+  K IGIV   D ++ 
Sbjct: 139 VSMFMSKKVTTINKDVDLVQATRQMLHRGFRRLPVVDEEGKVIGIVTAADCIKA 192



 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M     +  +     L+ A   +  + F  + VVDE  K+ GI+T  D  +   K +  L
Sbjct: 141 MFMSKKVTTINKDVDLVQATRQMLHRGFRRLPVVDEEGKVIGIVTAADCIKAASKSVEKL 200

Query: 284 --------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V D+M   P  I ED  +  A   L + NI  L+++DD  +  GI+   DL
Sbjct: 201 DPDYFFSKKVTDIMSTPPISIEEDRSINEAAATLIEKNIGSLLILDDESRPKGIITERDL 260

Query: 336 L 336
           L
Sbjct: 261 L 261



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 14/120 (11%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---------- 278
             P++ I   L+ A   ++E+  G V + +E  K++GI++  D+   +            
Sbjct: 10  RPPIISIEDSLMQAFKRINERGIGRVIIANE--KVEGILSTRDLLSVYLSFCPQSCSQGD 67

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              ++ +     M  NP V+ E   +  A+ ++   N   L VVDD  +  GIV   ++L
Sbjct: 68  LYKMSNMKASLYMTPNPAVVNEKDDILEAITIMVTRNFGSLPVVDDLGRPTGIVTEREML 127



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
                  ++    + +A   L EK  G + ++D+  + KGIITE D+    H  L+
Sbjct: 214 MSTPPISIEEDRSINEAAATLIEKNIGSLLILDDESRPKGIITERDLLIALHYQLH 269


>gi|288561250|ref|YP_003424736.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288543960|gb|ADC47844.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 294

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +++T ++E   G + +VD+  KL GI+TE D        L   +V D+MIK+
Sbjct: 110 VGPKATIRESVTKMTENGIGSLPIVDKEGKLVGIVTERDFALALAGSLTNETVGDLMIKD 169

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  T +    +++ ++N+  + VV++  K +GIV   D+LRF
Sbjct: 170 VITTTCGTPIESCSKIMVRNNLRRIPVVEED-KLVGIVTSTDILRF 214



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 43/119 (36%), Gaps = 17/119 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           +     + +A  ++ E  F  + V   G  KL GI+T  DI                   
Sbjct: 30  IPQTKTIKEAAEMMIEHEFRRLPVTQPGSNKLLGIVTAMDILDFLGGGSKFDIIEKKHND 89

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                    V+++M +    +     +  ++  + ++ I  L +VD   K +GIV   D
Sbjct: 90  NFLAAINDQVKEIMTRGVISVGPKATIRESVTKMTENGIGSLPIVDKEGKLVGIVTERD 148



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 20/152 (13%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF +               D+M           G P+     I+       + VV+E
Sbjct: 145 TERDFAL---ALAGSLTNETVGDLMIKDVITTTC--GTPIESCSKIMVRNNLRRIPVVEE 199

Query: 260 GQKLKGIITEGDIFRNFHK-------------DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
             KL GI+T  DI R F               D+    + D++  N  V      L    
Sbjct: 200 D-KLVGIVTSTDILRFFGDKEMFASMTSNSGLDVLKRQISDIVKPNISVTESYVKLGDLC 258

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LL + NI  + VVDD  K +GI+   D+L  
Sbjct: 259 DLLAEKNIGGVPVVDD-NKLVGIITERDILNA 289



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 286 EDVMI---KNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
            ++M    K    I +   +  A +++ +H    L V      K +GIV  +D+L
Sbjct: 17  GEIMTLAKKEVISIPQTKTIKEAAEMMIEHEFRRLPVTQPGSNKLLGIVTAMDIL 71



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 51/235 (21%), Positives = 93/235 (39%), Gaps = 26/235 (11%)

Query: 43  SSLQGELSFQFHCAV-EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
             ++ + +  F  A+ +++K I  R VI+ +G    I  +  + +   G  S  +   E 
Sbjct: 81  DIIEKKHNDNFLAAINDQVKEIMTRGVIS-VGPKATI-RESVTKMTENGIGSLPIVDKEG 138

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
               +G++T  D  + L+ S +++ +  ++   +           E+ S +    ++   
Sbjct: 139 KL--VGIVTERDFALALAGSLTNETVGDLM--IKDVITTTCGTPIESCSKIMVRNNLR-R 193

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           +P   E    G+   TS  +    GD             +  F  +     L  L    S
Sbjct: 194 IPVVEEDKLVGIV--TSTDILRFFGD-------------KEMFASMTSNSGLDVLKRQIS 238

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           D++     I + +    L D   +L+EK  G V VVD+  KL GIITE DI    
Sbjct: 239 DIVKPN--ISVTESYVKLGDLCDLLAEKNIGGVPVVDDN-KLVGIITERDILNAV 290


>gi|119025468|ref|YP_909313.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium
           adolescentis ATCC 15703]
 gi|118765052|dbj|BAF39231.1| Inosine-5'-monophosphate dehydrogenase [Bifidobacterium
           adolescentis ATCC 15703]
          Length = 514

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S +D        +   + +       
Sbjct: 57  KVPAISAAMDTVTESDMAIAMARNGGIGVLHRNLSIDD--------QAAQVDIVKRSESG 108

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    V     L D   +        + VVD+  KL GIIT  D+     +D + L V
Sbjct: 109 MINDPLTVSPDVTLADLDKLCGRFHISGLPVVDKDSKLVGIITNRDMRFIASEDYDRLKV 168

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM + N      D     A  LL +H +  L +VD      G++   D ++
Sbjct: 169 SEVMTRENLITGPSDISKEDAHDLLAKHKVEKLPLVDSEGHLTGLITVKDFVK 221


>gi|288961578|ref|YP_003451888.1| signal-transduction protein with CBS domains [Azospirillum sp.
           B510]
 gi|288913858|dbj|BAI75344.1| signal-transduction protein with CBS domains [Azospirillum sp.
           B510]
          Length = 144

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 55/127 (43%), Gaps = 4/127 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              A+ +   G+ I        +     +L+E R G V V+D+  K  GI++E DI R  
Sbjct: 1   MHVAAVLKRKGNRIVSAAPDDSVAAVTRLLTEHRIGAVLVMDDDGKPVGILSERDIVRAV 60

Query: 277 HKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +D          D+M ++      +  +   M ++ +  I  + ++D   + +G++   
Sbjct: 61  ARDGAAALERPATDLMTRDLITASPNDTIADMMAVMTERRIRHVPILD-SGRVVGVISIG 119

Query: 334 DLLRFGI 340
           D+++  I
Sbjct: 120 DVVKARI 126


>gi|284163584|ref|YP_003401863.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
 gi|284013239|gb|ADB59190.1| peptidase M50 [Haloterrigena turkmenica DSM 5511]
          Length = 393

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGI 266
            K     V   D+M     +  V+    + + +  +  +R     V+D    EG++L G+
Sbjct: 243 MKAAFQDVTVGDIMTPAGDLHTVEPETTIAELVQRMFTERHTGYPVIDTDAFEGERLVGL 302

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T  D       + +  +V++VM  + K I  D+    A++ +R++NI  L+VVDD    
Sbjct: 303 VTLTDAREVDPVERDAFTVDEVMSTDLKTITPDSDAMTAIEEMRENNIGRLLVVDDGD-L 361

Query: 327 IGIVHFLDLLRF 338
           +G++   D++  
Sbjct: 362 VGLISRSDVMTA 373



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               +  +      + AI  + E   G + VVD+   L G+I+  D+   F 
Sbjct: 325 MSTDLKTITPDSDAMTAIEEMRENNIGRLLVVDD-GDLVGLISRSDVMTAFD 375


>gi|225628798|ref|ZP_03786832.1| inosine-5''-monophosphate dehydrogenase [Brucella ceti str. Cudo]
 gi|225616644|gb|EEH13692.1| inosine-5''-monophosphate dehydrogenase [Brucella ceti str. Cudo]
          Length = 499

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 48  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 106

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 107 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 163

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 164 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKGRCVGLVTVKDI 211


>gi|52841951|ref|YP_095750.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|54297637|ref|YP_124006.1| hypothetical protein lpp1688 [Legionella pneumophila str. Paris]
 gi|52629062|gb|AAU27803.1| inosine-5'-monophosphate dehydrogenase [Legionella pneumophila
           subsp. pneumophila str. Philadelphia 1]
 gi|53751422|emb|CAH12840.1| hypothetical protein lpp1688 [Legionella pneumophila str. Paris]
          Length = 490

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 42  NMPLISAAMDTVTEARLAIALAQEGGLG-----IIHKNMSIADQAEEVRRVKKFESGMVK 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++++  F  V VVD G+ L GI+T  DI   F  ++N L+V  V
Sbjct: 97  DPISVTPDLTVKELLAVMTKYNFSGVPVVD-GKHLVGIVTSRDIR--FETNMN-LTVAQV 152

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M    +   + E         LL +H I  L+VV++  +  G++   D+ +  
Sbjct: 153 MTPKGRLVTVKEGASREEVRSLLHKHRIEKLLVVNENFELRGLITVKDIQKAK 205


>gi|206900294|ref|YP_002251478.1| transcriptional regulator [Dictyoglomus thermophilum H-6-12]
 gi|206739397|gb|ACI18455.1| transcriptional regulator [Dictyoglomus thermophilum H-6-12]
          Length = 281

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 5/197 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +       + +     ++ +   ++  L+ +      + ++ES+L      +   A+E I
Sbjct: 70  IALATEKIQPIKTIHQAVQEGDDLETILKKVF--SANIRAMESTLNVISVKEIERAIEAI 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              + ++ I G+G SG +          TG P+     +        ++   D++I +S 
Sbjct: 128 LNAR-QLQIYGVGGSGPVALDAQHKFMKTGIPTVAYVDSHMMAMSASILEPQDVVIGISA 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGSS ++   L  A+      I IT   ++ +    DI L++  E          T++ I
Sbjct: 187 SGSSKDIIDALELAKNRGATTIGITHYARTPLDRVLDIKLSVSSEETFYRTE--STSARI 244

Query: 181 MQLAIGDALAIALLESR 197
            QL+I D L I +   R
Sbjct: 245 AQLSIIDTLYIGVALRR 261


>gi|296269624|ref|YP_003652256.1| CBS domain-containing membrane protein [Thermobispora bispora DSM
           43833]
 gi|296092411|gb|ADG88363.1| CBS domain containing membrane protein [Thermobispora bispora DSM
           43833]
          Length = 234

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 46/135 (34%), Gaps = 30/135 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------------- 275
           V    P  D   +L         VVD    + G+++E D+ R                  
Sbjct: 16  VNGSTPFRDIAEVLITHNVSAAPVVDGEGHVIGVVSEADLLRKEELREQYYREGYKLPLS 75

Query: 276 -------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                          +    L+   +M   P  I     +  A +L+ +H +  L VVDD
Sbjct: 76  ARLRERLGRPGGDVEEKARALTAAQLMTAPPITITPYKSVVSAARLMSKHGVKRLPVVDD 135

Query: 323 CQKAIGIVHFLDLLR 337
             + +GIV   DLL+
Sbjct: 136 EGRLVGIVSRHDLLK 150



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 24/57 (42%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V DVM      +   T      ++L  HN+S   VVD     IG+V   DLLR 
Sbjct: 2   HKKVRDVMTTQVASVNGSTPFRDIAEVLITHNVSAAPVVDGEGHVIGVVSEADLLRK 58



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 29/71 (40%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            PGG +       +           +     ++ A  ++S+     + VVD+  +L GI+
Sbjct: 84  RPGGDVEEKARALTAAQLMTAPPITITPYKSVVSAARLMSKHGVKRLPVVDDEGRLVGIV 143

Query: 268 TEGDIFRNFHK 278
           +  D+ + F +
Sbjct: 144 SRHDLLKVFVR 154


>gi|256824621|ref|YP_003148581.1| inosine-5'-monophosphate dehydrogenase [Kytococcus sedentarius DSM
           20547]
 gi|256688014|gb|ACV05816.1| inosine-5'-monophosphate dehydrogenase [Kytococcus sedentarius DSM
           20547]
          Length = 498

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  SA M       +AIA+            +LH    +         V  S + +   
Sbjct: 45  IPLLSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIADQAAQVDRVKRSENGMISD 99

Query: 234 KI----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
            +       L +   +    R   + VVDE  KL GIIT  D+   F  D ++  V +VM
Sbjct: 100 PVTTTVDATLAEVDELCGRFRVSGLPVVDEAGKLVGIITNRDLR--FETD-HSRPVGEVM 156

Query: 290 IKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P V          A+  L +H I  L +VDD     G+    D  +
Sbjct: 157 TRQPLVTAPVGVDKHEALAKLAEHKIEKLPLVDDQGVLKGLFTVKDFTK 205


>gi|222152185|ref|YP_002561345.1| IMP dehydrogenase [Macrococcus caseolyticus JCSC5402]
 gi|222121314|dbj|BAH18649.1| IMP dehydrogenase [Macrococcus caseolyticus JCSC5402]
          Length = 489

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 15/186 (8%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              + L        +   P  SA M       +AIA+            V+H    +   
Sbjct: 27  PHTVDLSVSLSERLNLKIPVLSAGMDTVTEAKMAIAMARQGGLG-----VIHKSMSIEQQ 81

Query: 217 FVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEG 270
                 V  S + +            +  A  ++ + R   V +V+  E  +L GI+T  
Sbjct: 82  ADEVQKVKRSENGVITNPFYLTPDEQVFAAEHLMGKYRISGVPIVNSAENMELVGILTNR 141

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D+   F +D  ++ + DVM     V     T L  A ++L++H I  L +V++     G+
Sbjct: 142 DLR--FIED-YSIKISDVMTSEELVTAPVGTTLEQAEEILQRHKIEKLPIVNEAGHLKGL 198

Query: 330 VHFLDL 335
           +   D+
Sbjct: 199 ITIKDI 204


>gi|218887932|ref|YP_002437253.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218758886|gb|ACL09785.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 223

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     ++ A  IL E R   + VVD   +L GI+++ DI             
Sbjct: 7   MTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEASPSKATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + V+D+M ++P  +  D  +      + +  I  L V+DD  K +GI+   
Sbjct: 67  HELYYLLSEIKVKDIMTRDPFTVRADDTVETVALNMIEKRIGGLPVIDDAGKLVGIISDS 126

Query: 334 DLLR 337
           D+ +
Sbjct: 127 DVFK 130



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + M K+   +  DT +  A ++L+++ I  L VVD   + IGIV   D+   
Sbjct: 3   IREWMTKDVITVTPDTSMMKASKILKENRIRRLPVVDAEGRLIGIVSDRDIKEA 56



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V+    +      + EKR G + V+D+  KL GII++ D+F+  
Sbjct: 89  VRADDTVETVALNMIEKRIGGLPVIDDAGKLVGIISDSDVFKVL 132


>gi|302342238|ref|YP_003806767.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Desulfarculus baarsii DSM 2075]
 gi|301638851|gb|ADK84173.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfarculus baarsii DSM 2075]
          Length = 643

 Score = 91.5 bits (226), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 42/104 (40%), Gaps = 3/104 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIK 291
                L  A  +++E++ G + V D   +  GI+T+ D               + D M  
Sbjct: 181 PPQTSLRQAARLMTERQVGSIIVADAAGQPIGILTDSDFRGRVMLSARHFDQPIADFMTS 240

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + I  +     A+  + +H +  L VV +  + +G+V   DL
Sbjct: 241 PVRTIAPNAYAFDALLTMSRHGLHHLAVV-EGGRLVGVVSDRDL 283



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               L+   V +VM +        T L  A +L+ +  +  ++V D   + IGI+ 
Sbjct: 160 LGAALSRSRVGEVMSRQALCGPPQTSLRQAARLMTERQVGSIIVADAAGQPIGILT 215



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               +  +       DA+  +S      +AVV EG +L G++++ D+
Sbjct: 238 MTSPVRTIAPNAYAFDALLTMSRHGLHHLAVV-EGGRLVGVVSDRDL 283


>gi|284006290|emb|CBA71525.1| inosine-5'-monophosphate dehydrogenase [Arsenophonus nasoniae]
          Length = 489

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 78/210 (37%), Gaps = 13/210 (6%)

Query: 136 RFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              I   A+T ++  +V  H+++    + L  +  +      P  SA M       LAIA
Sbjct: 3   MLRIKKEALTFDDVLLVPAHSNVLPNTVDLSTQLTAAIRLTIPMLSAAMDTVTESDLAIA 62

Query: 193 LLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           L +     F   +  +     ++  +    S ++        V     + +   +     
Sbjct: 63  LAQEGGIGFIHKNMSIERQAEEVRRVKKYESGIV---IDPVTVTPETTIREVYELAERNG 119

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQL 308
           F    VV+  ++L GIIT  DI   F  DL+   V  VM   P    + E     V +Q 
Sbjct: 120 FAGYPVVNNNKELVGIITGRDIR--FVTDLDK-PVTAVMTAKPHLVTVKEGESRDVVLQK 176

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L +  I   +VVDD     G++   D  + 
Sbjct: 177 LHERRIEKALVVDDNFHLFGMITVKDFQKA 206


>gi|241190571|ref|YP_002967965.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|241195977|ref|YP_002969532.1| inosine-5-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|240248963|gb|ACS45903.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis Bl-04]
 gi|240250531|gb|ACS47470.1| inosine-5-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis DSM 10140]
 gi|295793558|gb|ADG33093.1| inosine-5-monophosphate dehydrogenase [Bifidobacterium animalis
           subsp. lactis V9]
          Length = 484

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 28  KVPVLSAAMDTVTEADMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 82

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD   KL GIIT  D+     +D + L V+DV
Sbjct: 83  DPLTVNPDATLADLDKLCGKFHISGLPVVDHDNKLVGIITNRDMRFIASEDYDHLRVKDV 142

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      D     A  LL ++ I  L +VD      G++   D ++
Sbjct: 143 MTKENLVTGPSDISKKDAHDLLAKNKIEKLPLVDGEGHLTGLITVKDFVK 192


>gi|237744229|ref|ZP_04574710.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 7_1]
 gi|229431458|gb|EEO41670.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 7_1]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI      D     V D+M 
Sbjct: 99  ITLNKDSRVFQAEELMSRYKISGLPVIEDDGKLIGIITNRDIKYRKELD---QPVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|161502273|ref|YP_001569385.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863620|gb|ABX20243.1| hypothetical protein SARI_00303 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITG+G SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVAMLRHAR-RIVITGMGASGLVAQNFAWKLLKIGVNAG 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +   DL++ +S+SG   ELK       R    ++AIT  + + +  
Sbjct: 163 VERDMHALLSTVQALAPGDLLLAISYSGERRELKLAADETLRTGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|68248830|ref|YP_247942.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae
           86-028NP]
 gi|68057029|gb|AAX87282.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           86-028NP]
          Length = 488

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDEENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|298529720|ref|ZP_07017123.1| inosine-5'-monophosphate dehydrogenase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511156|gb|EFI35059.1| inosine-5'-monophosphate dehydrogenase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 485

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI++  S         V+H    +         V  S   + +
Sbjct: 41  NIPLLSAAMDTVTEAEMAISMARSGGVG-----VVHKNMGIEEQSQEVERVKKSESGMIV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V  G  +   + ++SE R   + V +E  +L GI+T  D+   F  DL T  V+ V
Sbjct: 96  DPVTVHPGDDVETVLRLMSEYRISGLPV-EEDGRLVGIVTNRDVR--FVSDLRT-RVDQV 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   +   +   T L  A  +L+++ I  L+VV+      G++   D+ +  
Sbjct: 152 MTSGDLVTVPVGTTLLEAKDILQKNKIEKLLVVEKGGGLKGLITIKDIEKIK 203


>gi|148825495|ref|YP_001290248.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae
           PittEE]
 gi|229846310|ref|ZP_04466418.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           7P49H1]
 gi|148715655|gb|ABQ97865.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           PittEE]
 gi|229810403|gb|EEP46121.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           7P49H1]
 gi|309972632|gb|ADO95833.1| Inosine-5-monophosphate dehydrogenase [Haemophilus influenzae
           R2846]
          Length = 488

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDEENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|14520325|ref|NP_125800.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
           GE5]
 gi|5457540|emb|CAB49031.1| guaB-like2 inosine-5'-monophosphate dehydrogenase related
           [Pyrococcus abyssi GE5]
          Length = 136

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMI 290
           VK    + +A  ++ E   G + VVD+   + G  T+ DI  R     L+  + V+++M 
Sbjct: 18  VKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIVPGLSYDIPVKEIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    +  +T L   ++ + +H I  +++ +D  K +GI    DLL  
Sbjct: 78  KELITVNANTPLGDVLKKMSEHRIKHILI-EDEGKIVGIFTLSDLLEA 124



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 29/60 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++  M K    +  DT +  A +L+ + ++  L+VVDD    +G     D++R  I+
Sbjct: 4   KAPIKVYMTKKLMGVKPDTTVQEASKLMMEFDVGSLVVVDDEGNVVGFFTKSDIIRRVIV 63



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                        +  V    PL D +  +SE R   + + DE  K+ GI T  D+    
Sbjct: 67  SYDIPVKEIMTKELITVNANTPLGDVLKKMSEHRIKHILIEDE-GKIVGIFTLSDLLEAS 125

Query: 277 HKDLNTL 283
            + L T 
Sbjct: 126 RRRLETA 132


>gi|317484599|ref|ZP_07943503.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
 gi|316924139|gb|EFV45321.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
          Length = 225

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     ++ A  ++ +     + V+D G+ + GI+++ DI             
Sbjct: 7   MTKDVITVTPDTSMLKASKLMKDHNIRRLPVLD-GKHVVGIVSDRDIRAASPSKATTLDM 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + V+D+M  +P  + +   +  A  L+    I  L VVD   + +GI+   
Sbjct: 66  HELYYLLSEVKVKDIMTSDPVTVYDTDAVDAAALLMENKGIGGLPVVDGSGELVGIITDH 125

Query: 334 DLLR 337
           D+ R
Sbjct: 126 DIFR 129



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + M K+   +  DT +  A +L++ HNI  L V+D  +  +GIV   D+
Sbjct: 3   IREWMTKDVITVTPDTSMLKASKLMKDHNIRRLPVLD-GKHVVGIVSDRDI 52



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 22/57 (38%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                        V     +  A  ++  K  G + VVD   +L GIIT+ DIFR  
Sbjct: 75  VKVKDIMTSDPVTVYDTDAVDAAALLMENKGIGGLPVVDGSGELVGIITDHDIFRVL 131


>gi|256027893|ref|ZP_05441727.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D11]
 gi|289765842|ref|ZP_06525220.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D11]
 gi|289717397|gb|EFD81409.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. D11]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 42  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI      D     V D+M 
Sbjct: 99  ITLNKDSRVFQAEELMSRYKISGLPVIEDDGKLIGIITNRDIKYRKELD---QPVGDIMT 155

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 156 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 201


>gi|189485691|ref|YP_001956632.1| IMP dehydrogenase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
 gi|170287650|dbj|BAG14171.1| IMP dehydrogenase [uncultured Termite group 1 bacterium phylotype
           Rs-D17]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 65/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 42  NIPLMSAGMDTVTESKMAIAIAREGGIG-----IIHKNMSIKEQASEVDYVKRSDNGVIY 96

Query: 233 VKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A  +++  +   V ++++  +L GIIT  D+   F  D N   V ++
Sbjct: 97  DPFSLKKYNTLKEAKELVARYKISGVPIIEDNGRLIGIITNRDMR--FETD-NNKKVSEI 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N      DT    A ++L+   I  L +VD+     G++   DL + 
Sbjct: 154 MTKDNLVTAKVDTSFQEAKEILQGKKIEKLPLVDENFILKGLITIKDLEKA 204


>gi|147799151|emb|CAN63699.1| hypothetical protein VITISV_002255 [Vitis vinifera]
          Length = 1035

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   ++L      V  +M
Sbjct: 64  IPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIM 123

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +  D+L   A++ + Q     L VV++ +    ++  LD+ +
Sbjct: 124 TRHPIFVNSDSLAIEALEKMVQGKFRHLPVVENGE----VIAILDITK 167


>gi|317496080|ref|ZP_07954440.1| inosine-5'-monophosphate dehydrogenase [Gemella moribillum M424]
 gi|316913655|gb|EFV35141.1| inosine-5'-monophosphate dehydrogenase [Gemella moribillum M424]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/186 (19%), Positives = 68/186 (36%), Gaps = 15/186 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLKVNLTDKIKLSIPVISAAMDTVTEYKMAIAMAREGGIG-----VIHKNMSIEEQAEQ 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S   +            + +A +++ + +   V +V+  +  K+ GIIT  D+ 
Sbjct: 85  VRKVKRSESGVITDPFFLTPDSLVDEAESLMQQYKISGVPIVNNTDDMKVVGIITNRDMR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                D+    + +VM K +      +T L  A  +LR H I  L++ D+  K  G++  
Sbjct: 145 FLTDFDI---KISEVMTKEHLVTAPANTTLEEASVILRGHKIEKLILTDEAGKLTGLITI 201

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 202 KDIEKL 207


>gi|260494187|ref|ZP_05814318.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_33]
 gi|260198333|gb|EEW95849.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium sp. 3_1_33]
          Length = 488

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 61/166 (36%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 43  NLPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEEQAAEVDRVKRSESGMI---TNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  ++S  +   + V+++  KL GIIT  DI      D     V D+M 
Sbjct: 100 ITLNKDSRVFQAEELMSRYKISGLPVIEDDGKLIGIITNRDIKYRKELD---QPVGDIMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T L  A ++L  + I  L + D      G++   D+
Sbjct: 157 SKGLITAPVGTTLEQAKEILLANRIEKLPITDQNGYLKGLITIKDI 202


>gi|145632464|ref|ZP_01788198.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           3655]
 gi|144986659|gb|EDJ93211.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           3655]
          Length = 488

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDEENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|258593580|emb|CBE69921.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [NC10 bacterium 'Dutch sediment']
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/164 (25%), Positives = 60/164 (36%), Gaps = 6/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL             L P  +   +                
Sbjct: 42  NIPVVSAAMDTVTEARMAIALAREGGIGMIH-RALPPDRQALEVDKVKKSESGMIVDPIT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L DA+ ++   R   V V  +  KL GI+T  DI   F   L  L +  VM K+
Sbjct: 101 ISPDQKLSDALELMQHYRISGVPVT-QNGKLVGILTNRDIR--FETKL-DLKIAQVMTKD 156

Query: 293 -PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   T L  A ++L ++ I  L+VVDD     G++   D+
Sbjct: 157 RLITAPVGTSLEEAKEILHRNRIEKLLVVDDAFNLRGLITIKDI 200


>gi|307730970|ref|YP_003908194.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1003]
 gi|307585505|gb|ADN58903.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1003]
          Length = 281

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 66/172 (38%), Gaps = 7/172 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +      L  + ++L  +       A++ +   K R+   G G SG     +    
Sbjct: 94  AAKVLDRTIGALIQVRNNLSTD---SIAAAIDVLAQAK-RIEFYGAGGSGIAALDMQHKF 149

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G PS              M+   D+++ +S +G + ++      A      +IAIT 
Sbjct: 150 FRLGMPSVAYSDPHTFLMSAAMLGEGDVVVAISNTGRTRDIVDAAKSAVAGGAKVIAIT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              S +A  A + L    + ++     +P TS    LAIGD LA+ +   R 
Sbjct: 209 HGNSPLARIASVGLFANVDEDTDIF--SPMTSRTSHLAIGDILAVGVALQRG 258


>gi|167629225|ref|YP_001679724.1| hypothetical protein HM1_0848 [Heliobacterium modesticaldum Ice1]
 gi|167591965|gb|ABZ83713.1| conserved hypothetical protein [Heliobacterium modesticaldum Ice1]
          Length = 999

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
               ++        +  A  I++ +R   + + D   K  GI+TE D+ R      +   
Sbjct: 161 CMSTTLHRTDASTDIKVAFAIMNAQRLSSLLI-DRHGKTVGILTERDVVRFMRSGRSLDS 219

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           S+ +VM  +P  + ++  L  A +++ QH I  L+V D   +  G+V   D++R 
Sbjct: 220 SITEVMSPSPMTVSQEVSLFEAARIMEQHRIRRLLVRDPEGRICGMVSHSDIVRA 274



 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 28/130 (21%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNP 293
              L+DA+T++S+K    V V   G  + GIITE D+ R     ++    +VE VM  + 
Sbjct: 18  EALLVDAVTLMSDKNISSVLVT-RGSAVVGIITERDLVRLVATGIDPLKTAVEAVMTSHL 76

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVV-----------------------DDCQKA--IG 328
             + E   +  A+ ++ +  +  L+V                        DD       G
Sbjct: 77  VHLPETVPIDEALYVMEKEKVRHLLVTGVDADVAVSEPCAERYRKHQLRADDKGILSAKG 136

Query: 329 IVHFLDLLRF 338
           I+ + D++R 
Sbjct: 137 IITYTDVVRK 146



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-----------------------DEGQK 262
               +  +    P+ +A+ ++ +++   + V                        D+   
Sbjct: 72  MTSHLVHLPETVPIDEALYVMEKEKVRHLLVTGVDADVAVSEPCAERYRKHQLRADDKGI 131

Query: 263 L--KGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           L  KGIIT  D+ R   ++     L+V D M          T + VA  ++    +S L+
Sbjct: 132 LSAKGIITYTDVVRKLEEEFFKKPLTVSDCMSTTLHRTDASTDIKVAFAIMNAQRLSSLL 191

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           + D   K +GI+   D++RF
Sbjct: 192 I-DRHGKTVGILTERDVVRF 210



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  +  +    +  + LL  A+ L+   NIS ++V       +GI+   DL+R 
Sbjct: 3   TLASLASRELVTLQGEALLVDAVTLMSDKNISSVLVT-RGSAVVGIITERDLVRL 56



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     L +A  I+ + R   + V D   ++ G+++  DI R   K+  +
Sbjct: 232 VSQEVSLFEAARIMEQHRIRRLLVRDPEGRICGMVSHSDIVRAVRKNYRS 281


>gi|297159678|gb|ADI09390.1| IMP dehydrogenase/ GMP reductase [Streptomyces bingchenggensis
           BCW-1]
          Length = 500

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 45/174 (25%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        +   + +       
Sbjct: 49  NVPLLSAAMDKVTESRMAIAMARQGGAGVLHRNLSIED--------QANQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    L +A  +  + R   V V D   KL GI+T  D+   F  D     V
Sbjct: 101 MVTDPITVRPDATLAEADALCGKFRISGVPVTDAAGKLLGIVTNRDM--AFETD-RRRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AMQLLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 REVMTPMPLVTGKVGISGEDAMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVKA 211


>gi|227541807|ref|ZP_03971856.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51866]
 gi|227182250|gb|EEI63222.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51866]
          Length = 533

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 71/197 (36%), Gaps = 26/197 (13%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL LP E    P G               P  SA M       +AIA+            
Sbjct: 51  VLLLPAESNVIPSGVHTKTRLSKGIELNIPILSAAMDTVTEARMAIAMARHGGIG----- 105

Query: 206 VLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           VLH    +         V  S         +      +     I  +     + VVDE  
Sbjct: 106 VLHRNLSVEDQVHEVERVKRSESGMITDPVVATPDMTIAQVDEICGKYHISGLPVVDEKD 165

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVV 320
           KL GI T  D+   F  D+N L V+DVM   P  V  E    + A++LL +H +  L +V
Sbjct: 166 KLLGICTNRDMR--FEPDMNRL-VKDVMTPMPLIVAKESVTKSEALKLLSEHRVEKLPIV 222

Query: 321 DDCQKAIGIVHFLDLLR 337
            D    +G++   D ++
Sbjct: 223 KDDNTLVGLITVKDFVK 239


>gi|225181526|ref|ZP_03734968.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167774|gb|EEG76583.1| inosine-5'-monophosphate dehydrogenase [Dethiobacter alkaliphilus
           AHT 1]
          Length = 506

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 64  NIPLMSAGMDTVTESRMAIAMAREGGVG-----VIHKNMSVEFQAAEVDKVKRSEHGVIT 118

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++   R   V +  E  KL GIIT  D+   F  + + L ++DV
Sbjct: 119 NPFHLSPEHQIHDAAALMERYRISGVPITVE-GKLVGIITNRDLR--FETNYDRL-IKDV 174

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+  V+    T L  A ++L+QH +  L +VDD     G++   D+ + 
Sbjct: 175 MTKDRLVVAPVGTTLQQAQEILQQHKVEKLPIVDDDFMLKGLITIKDIEKA 225


>gi|222093782|ref|YP_002527830.1| inosine 5'-monophosphate dehydrogenase [Bacillus cereus Q1]
 gi|221237828|gb|ACM10538.1| IMP dehydrogenase (inositol-monophosphate dehydrogenase) [Bacillus
           cereus Q1]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLDEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|160946360|ref|ZP_02093569.1| hypothetical protein PEPMIC_00320 [Parvimonas micra ATCC 33270]
 gi|158447476|gb|EDP24471.1| hypothetical protein PEPMIC_00320 [Parvimonas micra ATCC 33270]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 69/170 (40%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP- 231
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 43  NIPIISAAMDTVTEHKMAIAMAREGGLG-----VIHKNMPIELQAEEVRKVKRSESGVIN 97

Query: 232 ---LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               +     + +A  ++ + R   V +V+  E +KL GI+T  D+   F +D  ++ ++
Sbjct: 98  DPFFLTPEHKVQEAEDLMRKYRISGVPIVNSMEEKKLVGILTNRDLR--FLED-YSVKID 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            VM K N      +T L  A ++LR H I  L +V++     G++   D+
Sbjct: 155 SVMTKENLVTAPSNTTLDDATKILRNHKIEKLPLVNEKGILTGLITIKDI 204


>gi|42779090|ref|NP_976337.1| inosine 5'-monophosphate dehydrogenase [Bacillus cereus ATCC 10987]
 gi|52145201|ref|YP_081627.1| inositol-5-monophosphate dehydrogenase [Bacillus cereus E33L]
 gi|206978352|ref|ZP_03239226.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus H3081.97]
 gi|217957589|ref|YP_002336131.1| inosine 5'-monophosphate dehydrogenase [Bacillus cereus AH187]
 gi|42735005|gb|AAS38945.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 10987]
 gi|51978670|gb|AAU20220.1| IMP dehydrogenase (inositol-monophosphate dehydrogenase) [Bacillus
           cereus E33L]
 gi|206743444|gb|EDZ54877.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus H3081.97]
 gi|217064324|gb|ACJ78574.1| inosine-5'-monophosphate dehydrogenase [Bacillus cereus AH187]
 gi|324324002|gb|ADY19262.1| inosine 5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 487

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLDEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|157371897|ref|YP_001479886.1| putative DNA-binding transcriptional regulator [Serratia
           proteamaculans 568]
 gi|157323661|gb|ABV42758.1| transcriptional regulator, RpiR family [Serratia proteamaculans
           568]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++ +  ++     ++ EK+   +L ++L      + H A+E ++  + RV++ GIG S
Sbjct: 87  NQILSSDALKTVGEKLLVEKQA--ALRATLDINSEERLHQALEMLRQAR-RVILLGIGAS 143

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +    +  L   G  +            +  + + DL++ +S+SG   E+      AR
Sbjct: 144 GLVAKDFSYKLLKIGVMAVAEQDMHVQLATVQALDKRDLLLAISFSGERREINLAAEEAR 203

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +AL++
Sbjct: 204 LAGAKVLALTSFSPNGLQQRADHCLYT--IAEEPNTRSAAISSSTAQYALTDLLFMALIQ 261

Query: 196 S 196
            
Sbjct: 262 H 262


>gi|326803798|ref|YP_004321616.1| inosine-5'-monophosphate dehydrogenase [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651451|gb|AEA01634.1| inosine-5'-monophosphate dehydrogenase [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 493

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 67/183 (36%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +  +         P  SA M       +AIAL  S         V+H    +      
Sbjct: 32  VNVSVQLADNIRLNVPILSASMDTVTESEMAIALARSGG-----MGVIHKNMTIDDQAGE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIF 273
              V  S   +            + +A  ++S      V +V+     KL GIIT  D  
Sbjct: 87  VRKVKRSESGVITNPFYLYPDSTVREAEELMSLYHISGVPIVESQSSHKLVGIITNRD-- 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           + F  D ++  + D M K N       T L  A ++L+ H I  L +VD+     G++ F
Sbjct: 145 KRFVTD-SSRKIADYMTKDNLVTAPVGTSLEAAEEILQSHRIEKLPLVDEAGNLSGLITF 203

Query: 333 LDL 335
            DL
Sbjct: 204 KDL 206


>gi|315161650|gb|EFU05667.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0645]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASILADLAKQQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|297569513|ref|YP_003690857.1| inosine-5'-monophosphate dehydrogenase [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925428|gb|ADH86238.1| inosine-5'-monophosphate dehydrogenase [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 486

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M        AI +            ++H    +         V  S   + +
Sbjct: 42  NIPLVSSAMDSVTEHRTAITMAREGGIG-----IIHKNMSIDEQAREVRKVKKSESGMVI 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    + +   I+   +   V V+ E  KL GI+T  D+     ++L    V DV
Sbjct: 97  DPVTVEENRTVREVNEIMRGYQISGVPVLRE-GKLVGIVTNRDLRFVTDENL---KVRDV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN         L  +  +L +H I  L+VVDD     G++   D+
Sbjct: 153 MTSKNLVTARPGITLEQSKAMLHEHRIEKLLVVDDDGNLQGLITIKDI 200


>gi|153010375|ref|YP_001371589.1| inositol-5-monophosphate dehydrogenase [Ochrobactrum anthropi ATCC
           49188]
 gi|151562263|gb|ABS15760.1| inosine-5'-monophosphate dehydrogenase [Ochrobactrum anthropi ATCC
           49188]
          Length = 497

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLTPERQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 105 IGPNATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIHEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 162 MTRENLITVRENVNQDEAKRLLHAHRIEKLLVVDDQGRCVGLVTVKDI 209


>gi|118443477|ref|YP_877467.1| hypothetical protein NT01CX_1385 [Clostridium novyi NT]
 gi|118133933|gb|ABK60977.1| CBS domain protein, putative [Clostridium novyi NT]
          Length = 142

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
              ++  +     +  A  ++SE   G + V   G+K+ GI+T+ DI        K+++ 
Sbjct: 7   MTKTVATINPEDSVERAAQMMSEYNVGSIPVC-RGEKVVGIVTDRDITLRSSAEGKNVHQ 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V+D+M  NP V+          +++ +  I  L VV+D  K +GIV   DL
Sbjct: 66  QKVKDIMTSNPVVVNPTMDTNEVARIMGERQIRRLPVVEDE-KVVGIVALGDL 117



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++++M K    I  +  +  A Q++ ++N+  + V    +K +GIV   D+ 
Sbjct: 3   IKNIMTKTVATINPEDSVERAAQMMSEYNVGSIPVC-RGEKVVGIVTDRDIT 53


>gi|328872298|gb|EGG20665.1| hypothetical protein DFA_00526 [Dictyostelium fasciculatum]
          Length = 244

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTL 283
               +I  V+    ++ AI  +   + G V VVD   K+ GI +E D   +   +DL + 
Sbjct: 102 QQAPNIIRVRENDTVLTAIKQMHTNKVGAVIVVDSQNKMTGIFSERDYLNSLAVRDLKSK 161

Query: 284 S--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V+DVM      +  DT     M+++ Q     L V+D   K +GIV   D+++
Sbjct: 162 DTYVKDVMTTPVVTVRLDTSTAKCMKIMSQRRFRHLPVIDGD-KLVGIVSIGDIVK 216



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 3/84 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+        L +      DVM +      V++       + I+S++RF  + V+D
Sbjct: 144 FSERDYLNSLAVRDLKSKDTYVKDVMTTPVVT--VRLDTSTAKCMKIMSQRRFRHLPVID 201

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
            G KL GI++ GDI ++   D  T
Sbjct: 202 -GDKLVGIVSIGDIVKHIISDQRT 224


>gi|299133662|ref|ZP_07026856.1| inosine-5'-monophosphate dehydrogenase [Afipia sp. 1NLS2]
 gi|298591498|gb|EFI51699.1| inosine-5'-monophosphate dehydrogenase [Afipia sp. 1NLS2]
          Length = 498

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 67/173 (38%), Gaps = 10/173 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ +S            P  +   +            +   
Sbjct: 44  NIPIMASAMDTVTEARMAIAMAQSGGIGVIHRNFNSPEDQAAQVRQVKKFESGMVVNPLT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++ +  F  + VV  G      KL GI+T  D+    + D     + +
Sbjct: 104 ISPDARLADALAMMKDHGFSGIPVVTGGGNGQPGKLVGILTNRDVRFATNPD---QKISE 160

Query: 288 VMIK-NPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   + E     T A +LL Q+ I  L+VVDD  + +G++   D+ + 
Sbjct: 161 LMTHENLITVREGGVNQTEAKKLLHQNRIEKLLVVDDQYRCVGLITVKDMEKA 213


>gi|227553965|ref|ZP_03984012.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis HH22]
 gi|227176951|gb|EEI57923.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis HH22]
 gi|315030187|gb|EFT42119.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4000]
 gi|315574334|gb|EFU86525.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309B]
 gi|315580191|gb|EFU92382.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309A]
          Length = 290

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 109 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 167

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 168 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 227

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 228 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 273


>gi|254468074|ref|ZP_05081480.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
 gi|207086884|gb|EDZ64167.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
          Length = 143

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V+   P+IDA+ I++E + G + V+ +  KL GII+E D  R      K      +E+VM
Sbjct: 19  VEPDRPVIDALIIMAEYKIGALLVM-QKNKLLGIISERDYAREIVLKGKSSKECLIEEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            KN   I  +      ++++ +++I  L V+ +  K +G++   DL + 
Sbjct: 78  TKNVITIDANDTYDKGLEIMTENHIRHLPVI-ENNKVVGMLSLGDLAKE 125


>gi|315122694|ref|YP_004063183.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
 gi|313496096|gb|ADR52695.1| inosine 5'-monophosphate dehydrogenase [Candidatus Liberibacter
           solanacearum CLso-ZC1]
          Length = 496

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 8/169 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  ++  +            +   
Sbjct: 46  NLPIISAAMDQVTDSRLAIAMAQAGGLGVIH-RNLSPCEQVSQVHQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA+ ++       + VV+       KL GI+T  D+            V ++
Sbjct: 105 ISPCSTLEDALFLMKNNSISGIPVVESNTCYPGKLVGILTNRDVRFASD---TQQRVGEL 161

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M ++   + ++  L  A  LL ++ I  L+VVDD    IG++   D+ R
Sbjct: 162 MTRDLITVKKEISLEEAKALLHKYRIEKLLVVDDDNCCIGLITVKDIER 210


>gi|309802629|ref|ZP_07696733.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium dentium
           JCVIHMP022]
 gi|308220693|gb|EFO77001.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium dentium
           JCVIHMP022]
          Length = 508

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 4/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +RN      +                       + PL
Sbjct: 51  KVPAISAAMDTVTESDMAIAM--ARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMINNPL 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +        + VVD+  KL GIIT  D+     +D + L V DVM +
Sbjct: 109 TVSPDVTLADLDKLCGRFHISGLPVVDKDNKLVGIITNRDMRFIASEDYDHLKVSDVMTR 168

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      +     A  LL ++ +  L +VD      G++   D ++
Sbjct: 169 EHLITGPSNISKEDAHDLLAKYKVEKLPLVDAEGHLTGLITVKDFVK 215


>gi|295113482|emb|CBL32119.1| transcriptional regulator, RpiR family [Enterococcus sp. 7L76]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A+   IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASILADLAKHQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|225438783|ref|XP_002283079.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 246

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M   + + +VK    + +A+ IL E R     V+D+  KL G++++ D+  
Sbjct: 83  NGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLA 142

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   V D+M   P V+ E T L  A
Sbjct: 143 LDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDA 202

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 203 ARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 237


>gi|291541851|emb|CBL14961.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus bromii L2-63]
          Length = 492

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 58/168 (34%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+            ++H    +         V  S + + +
Sbjct: 47  NTPLMTAAMDTVTETDMAIAMAREGGVG-----IIHKNMSIEKQADQVDRVKRSENGVIV 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + +   V +     KL GIIT  D+      D     +  V
Sbjct: 102 NPFFLSPENTVRDADELMGKYKISGVPIC-RDGKLVGIITNRDMRFMTGSDF-AQPISAV 159

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   N       T L  A Q+LR+H I  L +V       G++   D+
Sbjct: 160 MTHENLVTAPVGTTLKQAQQILREHRIEKLPIVGKDGSLKGLITIKDI 207


>gi|224826025|ref|ZP_03699128.1| transcriptional regulator, RpiR family [Lutiella nitroferrum 2002]
 gi|224601662|gb|EEG07842.1| transcriptional regulator, RpiR family [Lutiella nitroferrum 2002]
          Length = 283

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S+L            + A+E +     R+   G+G SG I +         G P+    
Sbjct: 101 VSALLKCRNDVNPAAVNAALELLANA-NRIEFYGLGNSGIIAADAQHKFFRFGIPTVAYA 159

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++   D+++ +S SG + EL   +  A      ++AIT+   S +A  A 
Sbjct: 160 DTHTQIMAASVLGEGDVLVAISNSGRTVELLDAVEVALHAGAKVVAITASG-SPLAKQAT 218

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L      ++  +  +P  S I+ L + D LA+ +   R 
Sbjct: 219 VTLVADAPEDTETY--SPMISRIVHLVLIDILAVGVALRRG 257


>gi|197249281|ref|YP_002147530.1| putative DNA-binding transcriptional regulator [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|197212984|gb|ACH50381.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+VITGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVITGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L + L++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMTLVQQ 262


>gi|320009034|gb|ADW03884.1| inosine-5'-monophosphate dehydrogenase [Streptomyces flavogriseus
           ATCC 33331]
          Length = 500

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V
Sbjct: 101 MVSDPITVHPDATLGEADALCAKFRISGVPVTDPAGKLLGIVTNRDM--AFESD-RSRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V          AM+LLR+H I  L +VDD     G++   D  + 
Sbjct: 158 REVMTPMPLVTGRVGISGVEAMELLRRHKIEKLPLVDDAGILKGLITVKDFKKA 211


>gi|262172662|ref|ZP_06040340.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           mimicus MB-451]
 gi|261893738|gb|EEY39724.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           mimicus MB-451]
          Length = 352

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 1/111 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           M       L+     +  A+ I++ +      VVD+  KL G+IT+GDI R    DL   
Sbjct: 1   MSHCWQKTLISELSTIKQALEIINNEALRVAVVVDQNDKLLGMITDGDIRRGLLNDLQLT 60

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +V  VM  NP      T     ++L+ +  I  + ++D   K +G+    
Sbjct: 61  DAVSKVMNSNPITAKLGTSKEQLVELMERKQILSVPLLDKENKVVGLETLH 111



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I E + +  A++++    + V +VVD   K +G++   D+ R G++
Sbjct: 10  ISELSTIKQALEIINNEALRVAVVVDQNDKLLGMITDGDI-RRGLL 54


>gi|163852356|ref|YP_001640399.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium extorquens
           PA1]
 gi|218531116|ref|YP_002421932.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           chloromethanicum CM4]
 gi|240139693|ref|YP_002964170.1| IMP dehydrogeanse [Methylobacterium extorquens AM1]
 gi|254562103|ref|YP_003069198.1| IMP dehydrogenase [Methylobacterium extorquens DM4]
 gi|163663961|gb|ABY31328.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium extorquens
           PA1]
 gi|218523419|gb|ACK84004.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           chloromethanicum CM4]
 gi|240009667|gb|ACS40893.1| IMP dehydrogeanse [Methylobacterium extorquens AM1]
 gi|254269381|emb|CAX25347.1| IMP dehydrogeanse [Methylobacterium extorquens DM4]
          Length = 496

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++          L P  +   + +          +   
Sbjct: 45  NMPIIASAMDTVTEAPMAIAMAQNGGLGVIH-RNLEPAEQAEQVRLVKKYESGMVLNPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++   R   + VV+ G      KL GI+T  D+    +       V +
Sbjct: 104 IHPDETLADAFEVMKRNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNAG---QPVAE 160

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 161 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|109900462|ref|YP_663717.1| RpiR family transcriptional regulator [Pseudoalteromonas atlantica
           T6c]
 gi|109702743|gb|ABG42663.1| transcriptional regulator, RpiR family [Pseudoalteromonas atlantica
           T6c]
          Length = 282

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L  +        FH AVE +K+ K R++I G+G S  +G   +  L   G  +    
Sbjct: 105 VAVLTETKNLNEEAAFHQAVELLKSAK-RILICGLGGSALVGKDFSYKLQKLGMLAIEEP 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A       ++ +DL+  +S SGS+ E+  ++  A++ S  +I +T    + V+  AD
Sbjct: 164 DMHAQLAFAATLSENDLVFAISESGSTREIVNVVKQAKQNSCKVITVTRYGATPVSDLAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           I L    E ES         +   Q  I D L IA+ +S
Sbjct: 224 IKLYSVAEEESARLSSI--MARTAQEFIIDILFIAITQS 260


>gi|325689345|gb|EGD31351.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK115]
          Length = 527

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 79  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 133

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 134 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 190

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 191 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 240


>gi|24214311|ref|NP_711792.1| nucleotidyl transferase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45658020|ref|YP_002106.1| nucleoside-diphosphate-sugar pyrophosphorylase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
 gi|24195234|gb|AAN48810.1| nucleotidyl transferase [Leptospira interrogans serovar Lai str.
           56601]
 gi|45601261|gb|AAS70743.1| nucleoside-diphosphate-sugar pyrophosphorylase [Leptospira
           interrogans serovar Copenhageni str. Fiocruz L1-130]
          Length = 351

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+     L DAI IL ++    V +VDE +KL G +T+GD+ R   ++    +SV +
Sbjct: 5   KNVLINSDLSLQDAIKILDKEALRIVLIVDENKKLLGTLTDGDVRRALMQNKGLAISVNE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM   PKV   +      +  + ++ +  L +VD+    +G+     LL
Sbjct: 65  VMSSKPKVAHANWTKERMLLEMEKYELLHLPIVDEQGILVGLETVHGLL 113


>gi|307290513|ref|ZP_07570426.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
 gi|306498460|gb|EFM67964.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
          Length = 290

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 109 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 167

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 168 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 227

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 228 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 273


>gi|297617244|ref|YP_003702403.1| inosine-5'-monophosphate dehydrogenase [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145081|gb|ADI01838.1| inosine-5'-monophosphate dehydrogenase [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 483

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 42  NIPIMSAGMDTVTDARMAIAVAREGGIG-----VIHKNMSIEAQAKAVDRVKRSEHGVIS 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DAI I+ E     V +  EG  L GIIT  DI     +D     + +V
Sbjct: 97  DPFSLSPRDKVRDAIRIMEEYHISGVPIT-EGTHLIGIITNRDIRF---EDDWDQEIGEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K N       T L  A ++LR+H +  L +VD+     G++   D+ + 
Sbjct: 153 MTKENLITAPVGTTLHEAREILRRHKVEKLPLVDEDFNLKGLITIKDIEKA 203


>gi|49474993|ref|YP_033034.1| inositol-5-monophosphate dehydrogenase [Bartonella henselae str.
           Houston-1]
 gi|49237798|emb|CAF26992.1| Inosine-5-prime-monophosphate dehydrogenase [Bartonella henselae
           str. Houston-1]
          Length = 499

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 13/198 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L+     +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVDLSTRIAADIKLN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A  ++       + VV+ G       
Sbjct: 80  SPTEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKALMRSHGISGIPVVENGIKGETAG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L GI+T  D+   F  DL    + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 RLVGILTNRDVR--FASDL-KQKIYELMTHENLITVRENVQLNEAKYLLHHHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D+  + +G++   D+ + 
Sbjct: 197 DEHNRCVGLITVKDIEKA 214


>gi|332687250|ref|YP_004457024.1| inosine-5'-monophosphate dehydrogenase [Melissococcus plutonius
           ATCC 35311]
 gi|332371259|dbj|BAK22215.1| inosine-5'-monophosphate dehydrogenase [Melissococcus plutonius
           ATCC 35311]
          Length = 494

 Score = 91.1 bits (225), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 15/179 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
            +     +   P  SA M       ++IA+            V+H    +         V
Sbjct: 36  VQLSPTLNLNIPLISASMDTVTDSKMSIAMARQGGLG-----VIHKNMTIEQQAEEVRKV 90

Query: 224 MHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFH 277
             S   + +          + DA  ++S  R   V +V+  E +KL GIIT  D+   F 
Sbjct: 91  KRSESGVIIDPFFLTPEHLVSDAEQLMSNYRISGVPIVETMENRKLVGIITNRDMR--FV 148

Query: 278 KDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D + L +  VM K +       T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 149 TDYH-LPIVHVMTKDHLVTAPIGTSLKDAEKILQKHKIEKLPIVDEKGCLSGLITIKDI 206



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 223 VMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           ++H      LV   IG  L DA  IL + +   + +VDE   L G+IT  DI +   
Sbjct: 155 IVHVMTKDHLVTAPIGTSLKDAEKILQKHKIEKLPIVDEKGCLSGLITIKDIEKVIE 211


>gi|319442948|ref|ZP_07992104.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium variabile
           DSM 44702]
          Length = 516

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/205 (19%), Positives = 72/205 (35%), Gaps = 8/205 (3%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA---PTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +D+V +           +    P  SA M       +A+A+
Sbjct: 22  RKVELVGLTFDDVLLLPAASDVVPSNVVTKTQLTRNITLNVPIISAAMDTVTEGRMAVAM 81

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
                        L    +   + +                    + +   + +  R   
Sbjct: 82  ARQGGMGIMH-RNLSIADQAEQVEIVKRSEAGMVSDPVTCTPDMTIAEVDALCARYRISG 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQH 312
           + VVD    L GI T  D+   F +D  +  V DVM   P  V  E      A++LL QH
Sbjct: 141 LPVVDAEGMLVGICTNRDMR--FEEDF-SAKVADVMTPMPLIVAEEGVSADAALRLLSQH 197

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            +  L +V+   K  G++   D  +
Sbjct: 198 KVEKLPIVNGAGKLTGLITVKDFAK 222


>gi|171741072|ref|ZP_02916879.1| hypothetical protein BIFDEN_00138 [Bifidobacterium dentium ATCC
           27678]
 gi|306823413|ref|ZP_07456788.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium dentium
           ATCC 27679]
 gi|171276686|gb|EDT44347.1| hypothetical protein BIFDEN_00138 [Bifidobacterium dentium ATCC
           27678]
 gi|304553120|gb|EFM41032.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium dentium
           ATCC 27679]
          Length = 514

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 4/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +RN      +                       + PL
Sbjct: 57  KVPAISAAMDTVTESDMAIAM--ARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMINNPL 114

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +        + VVD+  KL GIIT  D+     +D + L V DVM +
Sbjct: 115 TVSPDVTLADLDKLCGRFHISGLPVVDKDNKLVGIITNRDMRFIASEDYDHLKVSDVMTR 174

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      +     A  LL ++ +  L +VD      G++   D ++
Sbjct: 175 EHLITGPSNISKEDAHDLLAKYKVEKLPLVDAEGHLTGLITVKDFVK 221


>gi|204929510|ref|ZP_03220584.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
 gi|204321229|gb|EDZ06429.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Javiana str. GA_MM04042433]
          Length = 282

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+V TGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLLESVTMLRHAR-RIVTTGIGASGLVAQNFAWKLLKIGINAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ +S+SG   EL        R    ++AIT  + + +  
Sbjct: 163 VERDMHALLATVQALAPEDLLLAISYSGERRELNLAADETLRAGAKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|317106695|dbj|BAJ53196.1| JHL03K20.5 [Jatropha curcas]
          Length = 236

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +      D M   + + +VK    + +A+  L E R     V+D+  KL G++++ D+  
Sbjct: 72  SGVYTVGDFMTRKEDLQVVKPTTTVDEALQTLVEHRITGFPVIDDDWKLVGLVSDYDLLA 131

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   V D+M   P V+ E T L  A
Sbjct: 132 LDSISGGGRTDNSMFPEVDSTWKTFNEVQKLLSKTNGKLVGDLMTPAPVVVRETTNLEDA 191

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 192 ARLLLETKYRRLPVVDSEGKLVGIITRGNVVRAAL 226


>gi|302036774|ref|YP_003797096.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrospira
           defluvii]
 gi|190343189|gb|ACE75577.1| inosine-5'-monophosphate dehydrogenase [Candidatus Nitrospira
           defluvii]
 gi|300604838|emb|CBK41170.1| Inosine-5'-monophosphate dehydrogenase [Candidatus Nitrospira
           defluvii]
          Length = 488

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 61/164 (37%), Gaps = 6/164 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          VL P  +   +                
Sbjct: 42  NIPIVSAAMDTVTEARLAIAMAQEGGIGIVH-RVLSPTDQAAEIDKVKKSESGMILDPIT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA  +++  R   + V  +  KL GI+T  D+     +    L V  VM ++
Sbjct: 101 ISPDQTIRDAHDLMARYRISGIPVT-KAGKLVGILTNRDLRF---ETRMELKVSQVMKRD 156

Query: 293 -PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 E T L  A ++L +H I  L VV+   +  G++   D+
Sbjct: 157 KLITAPEGTSLEKAREILHEHRIEKLPVVNKQFELKGLITIKDI 200


>gi|332199050|gb|EGJ13131.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA47901]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|289192708|ref|YP_003458649.1| CBS domain containing membrane protein [Methanocaldococcus sp.
           FS406-22]
 gi|288939158|gb|ADC69913.1| CBS domain containing membrane protein [Methanocaldococcus sp.
           FS406-22]
          Length = 138

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
           K    +++A   + + +   + VVD+  K+ GI+T  DI  N  +D  TL  ++ DVM K
Sbjct: 22  KRDEGVVEAFEKMLKYKISSLPVVDDENKVIGIVTTTDIGYNLIRDRYTLETTIGDVMTK 81

Query: 292 NPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLR 337
           N   I ED  +  A++ +  +      I+ L VVD   K +GI+   D++R
Sbjct: 82  NVITIREDDNILEAIKKMDINGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 30/56 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + V+D+M KN      D  +  A + + ++ IS L VVDD  K IGIV   D+
Sbjct: 5   LKNIKVKDIMTKNVITAKRDEGVVEAFEKMLKYKISSLPVVDDENKVIGIVTTTDI 60



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  ++    +++AI  +            + VVD+  KL GII++GDI R   K
Sbjct: 79  MTKNVITIREDDNILEAIKKMDINGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136


>gi|229136856|ref|ZP_04265485.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST26]
 gi|229194403|ref|ZP_04321208.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus m1293]
 gi|228589059|gb|EEK47072.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus m1293]
 gi|228646591|gb|EEL02796.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus BDRD-ST26]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLDEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|17231481|ref|NP_488029.1| polyA polymerase [Nostoc sp. PCC 7120]
 gi|17133124|dbj|BAB75688.1| polyA polymerase [Nostoc sp. PCC 7120]
          Length = 904

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    + +A  IL       ++VV+   +L GII+  D+    H   +   V
Sbjct: 320 MSSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDLDIALHHGFSHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M  + K I  +T L     L+  ++I  L V+   ++ +GIV   D+LR 
Sbjct: 380 KGYMTTDLKTITPETTLPQIESLMVTYDIGRLPVL-ANEQLVGIVTRTDVLRE 431



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D+M    + I  +T +  A ++L ++  S L VV+   + +GI+   DL
Sbjct: 315 TARDLMSSPVRTIRPETTIAEAQRILLRYGHSGLSVVNPQGQLVGIISRRDL 366



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 1/69 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L    +++     G + V+   ++L GI+T  D
Sbjct: 369 ALHHGFSHAPVKGYMTTDLKTITPETTLPQIESLMVTYDIGRLPVL-ANEQLVGIVTRTD 427

Query: 272 IFRNFHKDL 280
           + R  H+++
Sbjct: 428 VLRELHQNI 436


>gi|189346991|ref|YP_001943520.1| inosine-5'-monophosphate dehydrogenase [Chlorobium limicola DSM
           245]
 gi|189341138|gb|ACD90541.1| inosine-5'-monophosphate dehydrogenase [Chlorobium limicola DSM
           245]
          Length = 497

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 69/175 (39%), Gaps = 16/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+  S        +  +     ++  +    S ++    ++
Sbjct: 41  RIPLVSAAMDTVTESRLAIAVARSGGIGIIHKNLSIEEQAREVAKVKRYESGIIRDPFTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTL 283
                   + DA+ ++       + V+       D  +KLKGI+T  D+     K     
Sbjct: 101 Y---EDATMQDALDLMLRHSISGIPVIEHPAYEGDTSKKLKGIVTNRDLR---IKPSLDA 154

Query: 284 SVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +M  KN     ED  L  A ++L ++ I  L++VDD     G++ F D+ +
Sbjct: 155 GIATIMTSKNLITAREDVDLETAEKILLKNKIEKLLIVDDENNLKGLITFKDIQK 209


>gi|301051749|ref|YP_003789960.1| inositol-5-monophosphate dehydrogenase [Bacillus anthracis CI]
 gi|300373918|gb|ADK02822.1| inositol-5-monophosphate dehydrogenase [Bacillus cereus biovar
           anthracis str. CI]
          Length = 487

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+         ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMRFIQE---YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L+ A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|228963109|ref|ZP_04124280.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228796565|gb|EEM44002.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar sotto str. T04001]
          Length = 424

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLEEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 204


>gi|228983268|ref|ZP_04143483.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229153792|ref|ZP_04281924.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228629661|gb|EEK86356.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus ATCC 4342]
 gi|228776448|gb|EEM24799.1| Inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V VV+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDERKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEQLITAPVGTTLDEAEKILQKYKIEKLPLVDNNGVLQGLITIKDI 209


>gi|326792396|ref|YP_004310217.1| inosine-5'-monophosphate dehydrogenase [Clostridium lentocellum DSM
           5427]
 gi|326543160|gb|ADZ85019.1| inosine-5'-monophosphate dehydrogenase [Clostridium lentocellum DSM
           5427]
          Length = 484

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +A+A+            ++H    +         V  S + +  
Sbjct: 41  NIPFMSAGMDTVTEARMAVAIARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A  ++++ R   V +  EG KL GI+T  D+   F  D N   +++V
Sbjct: 96  DPFSLSPEHYVYEANELMAKYRISGVPIT-EGTKLVGILTNRDLR--FETDFNR-KIKEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N     E T L  A +LL +H I  L +VD      G++   D+ + 
Sbjct: 152 MTSENLITAPEGTDLMEAKKLLAEHRIEKLPLVDAAGNLKGLITIKDIEKA 202



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T F      + + +++     G  L++A  +L+E R   + +VD    LKG+IT  DI 
Sbjct: 141 ETDFNRKIKEVMTSENLITAPEGTDLMEAKKLLAEHRIEKLPLVDAAGNLKGLITIKDIE 200

Query: 274 RNFH 277
           +   
Sbjct: 201 KAIM 204


>gi|254467423|ref|ZP_05080833.1| CBS domain protein [Rhodobacterales bacterium Y4I]
 gi|206684424|gb|EDZ44907.1| CBS domain protein [Rhodobacterales bacterium Y4I]
          Length = 174

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---VEDVM 289
           ++    +  A+  L +KR G + V D+   L+GI++E DI R   +         VED+M
Sbjct: 49  IRPNDTVGHAVEALRDKRIGALVVTDQNGALQGILSERDIVRRLAETPGHTLPQLVEDIM 108

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  K    D LL    +++ +     L VV D  +  G++   D++
Sbjct: 109 TREVKTCKPDDLLIDVAKVMNEGRFRHLPVVKDD-RLCGMITVGDVV 154



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/42 (28%), Positives = 20/42 (47%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I  +  +  A++ LR   I  L+V D      GI+   D++R
Sbjct: 49  IRPNDTVGHAVEALRDKRIGALVVTDQNGALQGILSERDIVR 90


>gi|328544052|ref|YP_004304161.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [polymorphum gilvum SL003B-26A1]
 gi|326413796|gb|ADZ70859.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Polymorphum gilvum SL003B-26A1]
          Length = 502

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 68/178 (38%), Gaps = 20/178 (11%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       LAIA+ ++         V+H    L         V         
Sbjct: 48  NLPILSSAMDTVTESRLAIAMAQAGG-----MGVVHRNLGLDQQAEQVRQVKKFESGMVV 102

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLN 281
           +  ++     L DA+ ++ +     + VV+ G        +L G++T  D+    +    
Sbjct: 103 NPVVIGPDATLKDALDLMGQYGISGIPVVENGGTGGQHTGRLVGVLTNRDVRFASNP--- 159

Query: 282 TLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V ++M + N   + +      A +LL QH I  L+VVD+    +G+V   D+ + 
Sbjct: 160 EQRVYELMTRENLVTVRDTVSQEEAKRLLHQHRIEKLLVVDEKYNCVGLVTVKDIEKA 217


>gi|312953514|ref|ZP_07772353.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|310628575|gb|EFQ11858.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|315152005|gb|EFT96021.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0031]
          Length = 282

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|168487206|ref|ZP_02711714.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC1087-00]
 gi|183569895|gb|EDT90423.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC1087-00]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|15668834|ref|NP_247637.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2496100|sp|Q58069|Y653_METJA RecName: Full=Uncharacterized protein MJ0653
 gi|1592300|gb|AAB98648.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 194

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +             +        + D   I++E   G V +V E  K  GI+TE DI 
Sbjct: 1   MKIACDIPVSEVMSFPVIKATKNMSIYDIANIMTENNIGAVVIV-ENNKPIGIVTERDIV 59

Query: 273 FRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L    V  E+VM K    I ++  +T A +++  H I  L VV    + +GIV
Sbjct: 60  KRVVSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGIKRLPVV-KDGELVGIV 118

Query: 331 HFLDLLR 337
              D++R
Sbjct: 119 TQSDIVR 125


>gi|325972335|ref|YP_004248526.1| RpiR family transcriptional regulator [Spirochaeta sp. Buddy]
 gi|324027573|gb|ADY14332.1| transcriptional regulator, RpiR family [Spirochaeta sp. Buddy]
          Length = 291

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 7/178 (3%)

Query: 18  LMKNSTVQCALRSIIAE-KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           L   +  Q  + SII   ++  ++LE  L  +       AV  I + +   +  G+G SG
Sbjct: 95  LESETAPQAVIHSIIQRFQQSFAALERGLDSQC---LEQAVTMILSARSTALF-GVGASG 150

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +       L   G P F+ H  +        I   D   ++S+SG +D + A     ++
Sbjct: 151 VVAFDFMQKLVRLGLPVFYTHDTDLQLTAASTIRMHDCAFIISYSGENDSMIAAAKQIQK 210

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
             +P+I+IT ++ + +   +DI + +P        G +  TS I QLA+ D L   ++
Sbjct: 211 NKVPIISITMDSDNTIRRLSDINIVVPASERIYRQGAS--TSRINQLAVIDILYSLMV 266


>gi|261749537|ref|YP_003257223.1| Inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
 gi|261497630|gb|ACX84080.1| Inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Periplaneta americana) str. BPLAN]
          Length = 491

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 69/168 (41%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M      +LAI++            ++H    +         V  S     D
Sbjct: 44  NIPILSAAMDTVTESSLAISIAREGG-----MGIIHKNMNIKNQSEEVYKVKRSESGMID 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  ++ +     + V+++ Q L GIIT  DI      DL++L VEDV
Sbjct: 99  DPITLSRKSTLREAQYLMKKYHISGLPVIEKDQTLVGIITNRDIKYRM--DLDSL-VEDV 155

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K       ++  L  A  +L +  I  L +VDD +K +G++   D+
Sbjct: 156 MTKEKLITSKKNITLEEAKNILLKERIEKLPIVDDLKKLVGLITIRDI 203


>gi|16262787|ref|NP_435580.1| hypothetical protein SMa0636 [Sinorhizobium meliloti 1021]
 gi|14523419|gb|AAK64992.1| conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 217

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 49/128 (38%), Gaps = 24/128 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------------NFHK 278
                +  A  ++ +     V VVD+   L G+I+EGD+ R                   
Sbjct: 9   SPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIRRAELCSEASVLMADMAIDP 68

Query: 279 DLN--------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D          +  V DVM  NP  I E+  L     L+++  I  + VV    + +GIV
Sbjct: 69  DDRANAFIRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVV-RDGELVGIV 127

Query: 331 HFLDLLRF 338
              DLL+ 
Sbjct: 128 SRADLLQA 135



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 25/49 (51%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M      +  D  +  A +L+  H++S + VVDD    +G++   DL+R
Sbjct: 1   MTTKVVKLSPDDSVRQAAKLMFDHHVSGVPVVDDDGHLLGVISEGDLIR 49


>gi|187735242|ref|YP_001877354.1| inosine-5'-monophosphate dehydrogenase [Akkermansia muciniphila
           ATCC BAA-835]
 gi|187425294|gb|ACD04573.1| inosine-5'-monophosphate dehydrogenase [Akkermansia muciniphila
           ATCC BAA-835]
          Length = 483

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 65/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL  +R       +  +P      +        ++    P+
Sbjct: 40  KIPVLSAAMDTVSESELAIAL--AREGGLAVIHRNNPIDIQAAMVSRVKRFENAVIPNPV 97

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L +   I+ ++ +    VVD  +KL+GIIT  D+      D   + V+DVM  
Sbjct: 98  TVNKDMTLEEVHQIMMDQGYSGFPVVDANRKLEGIITGRDMR--GVDDYQNVQVKDVMTP 155

Query: 292 --NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                     T +  A  +L  H I  L +VD+     G++   D+ +
Sbjct: 156 LSRLITAAPITTIEEARHILYTHRIEKLPLVDEHGVLAGLITETDIQK 203


>gi|15902032|ref|NP_346636.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           TIGR4]
 gi|15904074|ref|NP_359624.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           R6]
 gi|111658641|ref|ZP_01409291.1| hypothetical protein SpneT_02000231 [Streptococcus pneumoniae
           TIGR4]
 gi|116515965|ref|YP_817438.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           D39]
 gi|148988872|ref|ZP_01820287.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP6-BS73]
 gi|148993620|ref|ZP_01823091.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP9-BS68]
 gi|148997970|ref|ZP_01825483.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP11-BS70]
 gi|149007731|ref|ZP_01831340.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP18-BS74]
 gi|149012797|ref|ZP_01833742.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP19-BS75]
 gi|149020147|ref|ZP_01835121.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP23-BS72]
 gi|168484318|ref|ZP_02709270.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC1873-00]
 gi|168489302|ref|ZP_02713501.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP195]
 gi|168491760|ref|ZP_02715903.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC0288-04]
 gi|168494011|ref|ZP_02718154.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC3059-06]
 gi|168576100|ref|ZP_02722005.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           MLV-016]
 gi|169832639|ref|YP_001695580.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|182685164|ref|YP_001836911.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           CGSP14]
 gi|221232926|ref|YP_002512080.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           ATCC 700669]
 gi|225855721|ref|YP_002737233.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           JJA]
 gi|225857796|ref|YP_002739307.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           P1031]
 gi|225859999|ref|YP_002741509.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           70585]
 gi|225862044|ref|YP_002743553.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298229428|ref|ZP_06963109.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           str. Canada MDR_19F]
 gi|298255952|ref|ZP_06979538.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           str. Canada MDR_19A]
 gi|298501744|ref|YP_003723684.1| IMP dehydrogenase [Streptococcus pneumoniae TCH8431/19A]
 gi|303254889|ref|ZP_07340974.1| inositol-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS455]
 gi|303259716|ref|ZP_07345692.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP-BS293]
 gi|303262183|ref|ZP_07348128.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP14-BS292]
 gi|303264618|ref|ZP_07350537.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS397]
 gi|303266073|ref|ZP_07351967.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS457]
 gi|303268481|ref|ZP_07354275.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS458]
 gi|307068838|ref|YP_003877804.1| IMP dehydrogenase/GMP reductase [Streptococcus pneumoniae AP200]
 gi|307128491|ref|YP_003880522.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           670-6B]
 gi|14973739|gb|AAK76276.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           TIGR4]
 gi|15459740|gb|AAL00835.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           R6]
 gi|116076541|gb|ABJ54261.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           D39]
 gi|147755980|gb|EDK63023.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP11-BS70]
 gi|147760726|gb|EDK67698.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP18-BS74]
 gi|147763228|gb|EDK70167.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP19-BS75]
 gi|147925683|gb|EDK76759.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP6-BS73]
 gi|147927841|gb|EDK78863.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP9-BS68]
 gi|147930825|gb|EDK81806.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP23-BS72]
 gi|168995141|gb|ACA35753.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           Hungary19A-6]
 gi|172042416|gb|EDT50462.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC1873-00]
 gi|182630498|gb|ACB91446.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           CGSP14]
 gi|183572219|gb|EDT92747.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP195]
 gi|183574091|gb|EDT94619.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC0288-04]
 gi|183575860|gb|EDT96388.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CDC3059-06]
 gi|183578067|gb|EDT98595.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           MLV-016]
 gi|220675388|emb|CAR69990.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           ATCC 700669]
 gi|225721863|gb|ACO17717.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           70585]
 gi|225722336|gb|ACO18189.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           JJA]
 gi|225725874|gb|ACO21726.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           P1031]
 gi|225727572|gb|ACO23423.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           Taiwan19F-14]
 gi|298237339|gb|ADI68470.1| IMP dehydrogenase [Streptococcus pneumoniae TCH8431/19A]
 gi|301795137|emb|CBW37610.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           INV104]
 gi|301802889|emb|CBW35670.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           INV200]
 gi|302598160|gb|EFL65221.1| inositol-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS455]
 gi|302636823|gb|EFL67313.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP14-BS292]
 gi|302639268|gb|EFL69727.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP-BS293]
 gi|302641982|gb|EFL72335.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS458]
 gi|302644377|gb|EFL74630.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS457]
 gi|302645988|gb|EFL76216.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           BS397]
 gi|306410375|gb|ADM85802.1| IMP dehydrogenase/GMP reductase [Streptococcus pneumoniae AP200]
 gi|306485553|gb|ADM92422.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           670-6B]
 gi|327388972|gb|EGE87320.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA04375]
 gi|332071308|gb|EGI81803.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA17545]
 gi|332071498|gb|EGI81992.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA41301]
 gi|332071671|gb|EGI82164.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA17570]
 gi|332077794|gb|EGI88253.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA41301]
 gi|332198642|gb|EGJ12725.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA41317]
 gi|332198851|gb|EGJ12933.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           GA47368]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|301631324|ref|XP_002944748.1| PREDICTED: uncharacterized protein At5g10860, mitochondrial-like
           [Xenopus (Silurana) tropicalis]
          Length = 146

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
              + I  +     ++DA+ +++EK  G + V+ EGQ + GI+TE D  R      +   
Sbjct: 11  KPSNVIHCLAPDDSVLDALKLMAEKGIGALLVM-EGQAIVGIVTERDYARKIALLGRTSA 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V DVM ++   +         M ++  + +  L VVDD  +  G++   DL++
Sbjct: 70  ATLVRDVMTRDVLYVRPSQSSEECMAIMTSNRLRHLPVVDDAGQLQGLISIGDLVK 125



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        LG               +  V+      + + I++  R   + VVD+
Sbjct: 53  TERDYA--RKIALLGRTSAATLVRDVMTRDVLYVRPSQSSEECMAIMTSNRLRHLPVVDD 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L+G+I+ GD+ ++ 
Sbjct: 111 AGQLQGLISIGDLVKDI 127


>gi|302543267|ref|ZP_07295609.1| inosine-5'-monophosphate dehydrogenase [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460885|gb|EFL23978.1| inosine-5'-monophosphate dehydrogenase [Streptomyces himastatinicus
           ATCC 53653]
          Length = 500

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        +   + +       
Sbjct: 49  NIPLLSAAMDKVTEARMAIAMARQGGAGVLHRNLSIED--------QANQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    L +A  + ++ R   V V D   KL GI+T  D+     +      V
Sbjct: 101 MVTDPITVRPDATLHEADALCAKFRISGVPVTDAAGKLLGIVTNRDMAFEVDRG---RQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AMQLLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 REVMTPMPLVTGKVGISGDDAMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVKA 211


>gi|134046571|ref|YP_001098056.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C5]
 gi|132664196|gb|ABO35842.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C5]
          Length = 496

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/170 (24%), Positives = 70/170 (41%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            V+H    +         V  + + +  
Sbjct: 44  NIPIISAAMDTVSEKDLAIALARRGGI-----AVIHRNMTVEEQLKHIRAVKMAENLVIR 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               VK    +++A  I+ E     + VV E + L GI+T  D+     K++   +V+ V
Sbjct: 99  DVVTVKPSSTVLEAERIMYEYNVSGLPVVCENKTLVGILTTRDLKFVPDKNV---AVDTV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLR 337
           M K+   + EDT     +  L ++ I  L ++D   K  +G+V   D+L+
Sbjct: 156 MTKDVLHVHEDTPYEEILNRLYENKIERLPILDKNTKELLGMVTLRDILK 205


>gi|297197540|ref|ZP_06914937.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
 gi|197715588|gb|EDY59622.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
          Length = 234

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 51/127 (40%), Gaps = 25/127 (19%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------------FRNF---- 276
           G P  +   +L++ R   + VVDE  K+ G+I+E D+                R      
Sbjct: 11  GTPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLVVRQAATPDPFGPPRRRWLPALT 70

Query: 277 ------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                    +   +   +M + P  +  D  +  A + + Q  +  L V+D+  + +GIV
Sbjct: 71  RSARQQAAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEEHRLVGIV 130

Query: 331 HFLDLLR 337
              DLL+
Sbjct: 131 TRRDLLQ 137



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 22/48 (45%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +       T      +LL  H IS L VVD+  K IG++   DL+
Sbjct: 1   MTSDVVRATYGTPFKEVARLLADHRISGLPVVDEDDKVIGVISETDLV 48



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/112 (16%), Positives = 46/112 (41%), Gaps = 9/112 (8%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +     +        +      +    V     +++A   ++++    + V+DE  +L 
Sbjct: 68  ALTRSARQQAAKVEARTAGRLMTEPPVTVHADDSIVEAARTMAQRCVERLPVLDEEHRLV 127

Query: 265 GIITEGDIFRNFHK---DLNTLSVEDVMIKN----PKVILEDTLLTVAMQLL 309
           GI+T  D+ + F +   ++    V++V+I+     P+ I  D  +   + +L
Sbjct: 128 GIVTRRDLLQVFLRPDPEIREQVVQEVLIRALWVPPRSI--DASVAEGVVIL 177


>gi|224369574|ref|YP_002603738.1| GuaB [Desulfobacterium autotrophicum HRM2]
 gi|223692291|gb|ACN15574.1| GuaB [Desulfobacterium autotrophicum HRM2]
          Length = 491

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        +I++  +    F   +  +     ++  +    S ++      
Sbjct: 42  NIPIVSAAMDTVTEALTSISMARAGGMGFIHRNLTIPEQVIEVDRVKKSESGMI---VDP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + ++I++  R   + V  EG KL GI+T  D+   F  +L       VM 
Sbjct: 99  ITISPDATISEVLSIMATYRISGIPVT-EGDKLVGIVTNRDLR--FETELGK-PASAVMT 154

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N   + E   L  + ++L +H I  L+VVD   K  G++   D+
Sbjct: 155 KENLVTVHEGVSLEESKKMLHKHRIEKLLVVDKQGKLKGLITIKDI 200


>gi|327310841|ref|YP_004337738.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947320|gb|AEA12426.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 139

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIK- 291
           +    + D + +++E   G V +VD   +  GI+TE D+ R   +      +V  +    
Sbjct: 16  RPEDSVGDVVRLMAENNIGSVVLVDGAGRPVGIVTERDVVRGLARGAGLQDAVRSIATMG 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +      D  + VA++ +R   I  L+VVDD    +G++   DLL
Sbjct: 76  DLVTARADEDIYVALRKMRGRGIRHLVVVDDSGVLVGVISVRDLL 120



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V D++ + P     +  +   ++L+ ++NI  +++VD   + +GIV   D++R
Sbjct: 3   KVLDLVKRRPVTARPEDSVGDVVRLMAENNIGSVVLVDGAGRPVGIVTERDVVR 56


>gi|150400137|ref|YP_001323904.1| CBS domain-containing protein [Methanococcus vannielii SB]
 gi|150012840|gb|ABR55292.1| CBS domain containing protein [Methanococcus vannielii SB]
          Length = 137

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     +++A   L + +  C+ VV+E  +  GI+T  DI  N   D  TL  +++DVM 
Sbjct: 20  VSPDAGVVEAFEALLKNKVSCLPVVNEKNETIGIVTTTDIGYNLIIDEYTLETTIKDVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   +  +  L  A++ +         I+ L VV++  K +GI+   D++R 
Sbjct: 80  KNVVTVNSEESLVDALKKMDLFGNGKEIINQLPVVNNENKLVGIISDGDIIRA 132



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + V+D+M  +   +  D  +  A + L ++ +S L VV++  + IGIV   D+
Sbjct: 4   LKEIIVKDIMTGDVFSVSPDAGVVEAFEALLKNKVSCLPVVNEKNETIGIVTTTDI 59



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFG-----CVAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  V     L+DA+  +     G      + VV+   KL GII++GDI R   K
Sbjct: 78  MTKNVVTVNSEESLVDALKKMDLFGNGKEIINQLPVVNNENKLVGIISDGDIIRAISK 135


>gi|29376928|ref|NP_816082.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis V583]
 gi|229549395|ref|ZP_04438120.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis ATCC 29200]
 gi|256853794|ref|ZP_05559159.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|307271540|ref|ZP_07552812.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|29344393|gb|AAO82152.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis V583]
 gi|229305632|gb|EEN71628.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecalis ATCC 29200]
 gi|256710737|gb|EEU25780.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|306511812|gb|EFM80810.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|315146709|gb|EFT90725.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4244]
 gi|315159057|gb|EFU03074.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0312]
 gi|315170268|gb|EFU14285.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1342]
          Length = 282

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|153939138|ref|YP_001392006.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. Langeland]
 gi|168180866|ref|ZP_02615530.1| nucleoside-diphosphate-sugar pyrophosphorylase [Clostridium
           botulinum NCTC 2916]
 gi|152935034|gb|ABS40532.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. Langeland]
 gi|182668224|gb|EDT80203.1| nucleoside-diphosphate-sugar pyrophosphorylase [Clostridium
           botulinum NCTC 2916]
 gi|295320021|gb|ADG00399.1| nucleotidyl transferase family protein [Clostridium botulinum F
           str. 230613]
          Length = 358

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 57/114 (50%), Gaps = 1/114 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M +     L      +  ++ +L +   G + VVDE +KL G +T+GDI R   + ++  
Sbjct: 1   MINNMEKILAYPYYSIKKSLKLLDKGAKGIILVVDEERKLIGTVTDGDIRRAILEGISLD 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +E++M  NP  + + T +     LL ++ I  + +VD+  + + ++   D+L
Sbjct: 61  KKIEEIMHINPIKVKQGTPIEEIKDLLIKNAIREIPIVDEYDRVVDMITVNDIL 114


>gi|297539691|ref|YP_003675460.1| putative signal transduction protein [Methylotenera sp. 301]
 gi|297259038|gb|ADI30883.1| putative signal transduction protein with CBS domains
           [Methylotenera sp. 301]
          Length = 143

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +    P+ DA+ +L+E + G + V+D G KL G+ +E D  R      K   T  + +VM
Sbjct: 19  IAPHRPVFDALVVLAEYKIGALVVLD-GDKLVGVFSERDYAREIILKGKSSKTTPISEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   +  +  +  AM ++   +I  L V+ +  K IG++   DL++ 
Sbjct: 78  SSNVLTVKPNDTVEQAMNIMSDKHIRHLPVL-EGNKVIGMLSIGDLVKE 125



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            K    I     +  A+ +L ++ I  L+V+D   K +G+    D
Sbjct: 13  HKTVISIAPHRPVFDALVVLAEYKIGALVVLDGD-KLVGVFSERD 56


>gi|148984531|ref|ZP_01817819.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP3-BS71]
 gi|147923308|gb|EDK74422.1| inositol-5-monophosphate dehydrogenase [Streptococcus pneumoniae
           SP3-BS71]
 gi|301800960|emb|CBW33622.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           OXC141]
          Length = 492

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|77359601|ref|YP_339176.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas
           haloplanktis TAC125]
 gi|76874512|emb|CAI85733.1| IMP dehydrogeanse [Pseudoalteromonas haloplanktis TAC125]
          Length = 489

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    + ++      
Sbjct: 41  NLPLVSASMDTVTEARLAIALAQEGGLGFIHKNMTIAEQAKNVRKVKTYEAGIV---TYP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + DA+ +  EK F    V D    L GI+T  D+   F   L    V  VM 
Sbjct: 98  ITVTADLTIADALELSQEKGFSGFPVTDSDNNLVGIVTGRDMR--FETKL-EQPVSTVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 KKDKLVTVNEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQKA 204



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    S VM   D +  V  G    + + ++ E R   + VVD+  KLKG+IT  D  +
Sbjct: 144 KLEQPVSTVMTKKDKLVTVNEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203

Query: 275 NFHK 278
              K
Sbjct: 204 AQEK 207


>gi|255972099|ref|ZP_05422685.1| predicted protein [Enterococcus faecalis T1]
 gi|256763126|ref|ZP_05503706.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256963600|ref|ZP_05567771.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|257419887|ref|ZP_05596881.1| predicted protein [Enterococcus faecalis T11]
 gi|255963117|gb|EET95593.1| predicted protein [Enterococcus faecalis T1]
 gi|256684377|gb|EEU24072.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256954096|gb|EEU70728.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|257161715|gb|EEU91675.1| predicted protein [Enterococcus faecalis T11]
          Length = 284

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 103 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 161

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 162 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 221

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 222 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 267


>gi|254167105|ref|ZP_04873958.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197623961|gb|EDY36523.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 380

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 34/120 (28%), Positives = 64/120 (53%), Gaps = 3/120 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HK 278
           S V +     P++     + DA+ ++ +  +  + +V E  KL GII+  DI +     K
Sbjct: 68  SRVENIMVKPPVLDPDASIEDAVKLMIDAGYRSLPIV-EKNKLVGIISRTDIIKLVPKMK 126

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+  + VEDVM   P+++ ED+ +  A+ ++++     + VVD+ +K +GIVH  D  + 
Sbjct: 127 DVANIPVEDVMTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMSDAAKA 186



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               I + K+G  +  AI+ + E  F  + VV++  +L G +    + R     L +  V
Sbjct: 12  MTKDIVVAKLGDTISKAISKMQEHGFHELPVVNDRGELVGYVNYRTLIRRKSLSLYS-RV 70

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E++M+K P V+  D  +  A++L+       L +V+   K +GI+   D+++ 
Sbjct: 71  ENIMVKPP-VLDPDASIEDAVKLMIDAGYRSLPIVEK-NKLVGIISRTDIIKL 121



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 57/127 (44%), Gaps = 15/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
                 LV+   P+  A+ I+ +     V VVDE +KL GI+   D  +   ++    S 
Sbjct: 137 MTSEPELVEEDSPIQYAVDIMKKLGEMSVPVVDENRKLVGIVHMSDAAKAVWREKERASL 196

Query: 285 -------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                        V+++M+  P  + ED++L  A++ + + + S+  V+D     IG++ 
Sbjct: 197 GEVSGEKKKVQILVKEIMVP-PVYVSEDSILKDAVEKMIEFHSSICAVIDKKSVPIGVIS 255

Query: 332 FLDLLRF 338
             D++  
Sbjct: 256 QRDVIEA 262



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 31/56 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V+D+M K+  V      ++ A+  +++H    L VV+D  + +G V++  L+R
Sbjct: 5   EIKVKDIMTKDIVVAKLGDTISKAISKMQEHGFHELPVVNDRGELVGYVNYRTLIR 60



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 24/183 (13%), Positives = 70/183 (38%), Gaps = 14/183 (7%)

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF-SIPLIAITSENKSVVACHADI 158
           +A +  L ++ ++ L+ ++S +    ++  ++   +   +IP+  + +    +V   + I
Sbjct: 95  DAGYRSLPIVEKNKLVGIISRT----DIIKLVPKMKDVANIPVEDVMTSEPELVEEDSPI 150

Query: 159 --VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
              + + K+       +      ++ +      A A+   +        +    G+   +
Sbjct: 151 QYAVDIMKKLGEMSVPVVDENRKLVGIVHMSDAAKAVWREK----ERASLGEVSGEKKKV 206

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +   ++M        V     L DA+  + E      AV+D+     G+I++ D+    
Sbjct: 207 QILVKEIM---VPPVYVSEDSILKDAVEKMIEFHSSICAVIDKKSVPIGVISQRDVIEAI 263

Query: 277 HKD 279
            ++
Sbjct: 264 LRE 266


>gi|95930426|ref|ZP_01313162.1| inosine-5'-monophosphate dehydrogenase [Desulfuromonas acetoxidans
           DSM 684]
 gi|95133466|gb|EAT15129.1| inosine-5'-monophosphate dehydrogenase [Desulfuromonas acetoxidans
           DSM 684]
          Length = 490

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 68/181 (37%), Gaps = 14/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +  +      P  SA M        AI +            V+H         + 
Sbjct: 29  VDLSTQLTASISLNIPLMSAAMDTVTEARSAICMAREGGIG-----VIHKNMSPQEQALE 83

Query: 220 ASDVMHSGDSIPLVKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S   + +  I       + +A+ ++ + R   V +  E  +L GI+T  D+   
Sbjct: 84  VDQVKKSESGMIVDPITMEPKQKIYEALQLMEQYRISGVPIT-ENGRLVGILTNRDLR-- 140

Query: 276 FHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F   L+   +E+VM K+    +   T L  A   L +H I  L+VVDD     G++   D
Sbjct: 141 FETQLDQ-PIENVMTKDKLVTVPPGTTLEEAKFHLHKHRIEKLLVVDDDYALKGLITIKD 199

Query: 335 L 335
           +
Sbjct: 200 I 200


>gi|317151879|ref|YP_004119927.1| CBS domain-containing protein [Desulfovibrio aespoeensis Aspo-2]
 gi|316942130|gb|ADU61181.1| CBS domain containing protein [Desulfovibrio aespoeensis Aspo-2]
          Length = 224

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
             +++  +     ++ A  ++ +     + VVDE  ++ GI+++ DI             
Sbjct: 7   MTENVVTITPERSMMKASKLMKDHGISRLPVVDESGRIAGIVSDRDIKDASPSKATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + ++D+M K    I +D  +  A  L+ + N   L VVD   K +GI+   
Sbjct: 67  HELYYLLSEVKIKDIMTKKVTTIRDDETVEKAAVLMLEGNFGGLPVVDGDGKVVGIITDT 126

Query: 334 DLLR 337
           D+ +
Sbjct: 127 DIFK 130



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 28/51 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V++ M +N   I  +  +  A +L++ H IS L VVD+  +  GIV   D+
Sbjct: 3   VKNWMTENVVTITPERSMMKASKLMKDHGISRLPVVDESGRIAGIVSDRDI 53



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  ++    +  A  ++ E  FG + VVD   K+ GIIT+ DIF+  
Sbjct: 82  MTKKVTTIRDDETVEKAAVLMLEGNFGGLPVVDGDGKVVGIITDTDIFKVL 132


>gi|302557291|ref|ZP_07309633.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302474909|gb|EFL38002.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
          Length = 141

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVM 289
           V+    +++A  ++  +  G   VV +GQ++ G++T+ DI         D   LS  DV 
Sbjct: 16  VRPDASVVEAAQLMRTQNIG-DVVVADGQRIVGVLTDRDITVRAVAVAADPLGLSAGDVC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             NP  +  D  ++ A+ L+R+H I  + VV +    +G+V   DL   
Sbjct: 75  TPNPLTLAPDDPVSSAVALMREHAIRRIPVV-EGGLPVGLVSLGDLAEA 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM      +  D  +  A QL+R  NI  ++V D  Q+ +G++   D+ 
Sbjct: 5   VKDVMTPGVVAVRPDASVVEAAQLMRTQNIGDVVVAD-GQRIVGVLTDRDIT 55


>gi|332365085|gb|EGJ42850.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK355]
          Length = 493

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N     
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDFNQPISR 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +N       T L  A ++L++H I  L +VD+     G++   D+
Sbjct: 158 HMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDEKGCLSGLITIKDI 206


>gi|323702567|ref|ZP_08114230.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323532541|gb|EGB22417.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 910

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +A  I+       + V+ +  KL G+I+  D+ +  H  L    V
Sbjct: 315 MSSPVKMVFPETTIEEAGKIMLRYGHTGLPVI-KDGKLVGVISRRDVEKATHHGLGHAPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  N     +D  +     L+ + +I  L VV +  K +GIV   D+L+
Sbjct: 374 KGYMTVNVITATKDMTINEVQDLMIEKDIGRLPVV-EGDKVVGIVSRTDVLQ 424



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+V+D+M    K++  +T +  A +++ ++  + L V+    K +G++   D+ + 
Sbjct: 309 LTVKDIMSSPVKMVFPETTIEEAGKIMLRYGHTGLPVI-KDGKLVGVISRRDVEKA 363


>gi|311278506|ref|YP_003940737.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308747701|gb|ADO47453.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 282

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ +SL      +   +V  ++  + R++ITGIG SG +    +  L   G  + 
Sbjct: 104 KDNIAAMHASLDVNSEDKLLESVTLLRNAR-RIIITGIGASGLVARNFSWKLMKIGFNAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  + +DDL++ +S+SG   E+      A R    ++AIT  + + +  
Sbjct: 163 AEQDMHALLATVQAMAQDDLLLAISYSGERREINLAADEALRVGGKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L + L++ 
Sbjct: 223 RASHCLYTIAEEQATR--SAAISSTSAQMMLTDLLFMGLVQQ 262


>gi|62317731|ref|YP_223584.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|83269714|ref|YP_419005.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis biovar
           Abortus 2308]
 gi|189022986|ref|YP_001932727.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus S19]
 gi|225686187|ref|YP_002734159.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis ATCC
           23457]
 gi|254691234|ref|ZP_05154488.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 6 str.
           870]
 gi|254699021|ref|ZP_05160849.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|254732468|ref|ZP_05191046.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 4 str.
           292]
 gi|256043265|ref|ZP_05446202.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|256111737|ref|ZP_05452716.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis bv. 3
           str. Ether]
 gi|256256421|ref|ZP_05461957.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 9 str.
           C68]
 gi|260544972|ref|ZP_05820793.1| IMP dehydrogenase/GMP reductase [Brucella abortus NCTC 8038]
 gi|260564474|ref|ZP_05834959.1| IMP dehydrogenase/GMP reductase [Brucella melitensis bv. 1 str.
           16M]
 gi|297249781|ref|ZP_06933482.1| inosine-5'-monophosphate dehydrogenase [Brucella abortus bv. 5 str.
           B3196]
 gi|62197924|gb|AAX76223.1| inosine-5-monophosphate dehydrogenase [Brucella abortus bv. 1 str.
           9-941]
 gi|82939988|emb|CAJ13017.1| CBS domain:IMP dehydrogenase/GMP reductase:FMN/related
           compound-binding core:IMP dehydrogenase [Brucella
           melitensis biovar Abortus 2308]
 gi|189021560|gb|ACD74281.1| IMP dehydrogenase/GMP reductase [Brucella abortus S19]
 gi|225642292|gb|ACO02205.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis ATCC
           23457]
 gi|260098243|gb|EEW82117.1| IMP dehydrogenase/GMP reductase [Brucella abortus NCTC 8038]
 gi|260152117|gb|EEW87210.1| IMP dehydrogenase/GMP reductase [Brucella melitensis bv. 1 str.
           16M]
 gi|297173650|gb|EFH33014.1| inosine-5'-monophosphate dehydrogenase [Brucella abortus bv. 5 str.
           B3196]
 gi|326410527|gb|ADZ67591.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis M28]
 gi|326553818|gb|ADZ88457.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis M5-90]
          Length = 497

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 105 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 162 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKDRCVGLVTVKDI 209


>gi|42523553|ref|NP_968933.1| inosine-monophosphate dehydrogenase [Bdellovibrio bacteriovorus
           HD100]
 gi|39575759|emb|CAE79926.1| similar to inosine-monophosphate dehydrogenase [Bdellovibrio
           bacteriovorus HD100]
          Length = 487

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 78/206 (37%), Gaps = 19/206 (9%)

Query: 143 AITSENKSVVACHADI----VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A+T ++  ++  +++I    V+              P  SA M     + +A  + +   
Sbjct: 8   ALTFDDILLLPQYSEITPTDVVPRSVFARGKYLN-TPIISAAMDTVTENRVARVMAQHGG 66

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCV 254
                  ++H    +    +    V      + +          + +A+ ++ +     V
Sbjct: 67  LG-----IIHKNMDIDKQALEVEKVKKYESGMIMDPITLGPDHLVEEAVALMEKYSISGV 121

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHN 313
            V     +L GI+T  D+   F ++ N   + ++M K N       T L  A ++L++H 
Sbjct: 122 PVTV-NGELVGILTNRDLR--FEENFNQ-PIRNLMTKENLVTAKMGTTLDEAKKILQKHR 177

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFG 339
           I  L VVD   K  G++   D+ +  
Sbjct: 178 IEKLPVVDSKGKLKGLITIKDIEKAK 203


>gi|163848274|ref|YP_001636318.1| hypothetical protein Caur_2724 [Chloroflexus aurantiacus J-10-fl]
 gi|222526188|ref|YP_002570659.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
 gi|163669563|gb|ABY35929.1| protein of unknown function DUF294 nucleotidyltransferase putative
           [Chloroflexus aurantiacus J-10-fl]
 gi|222450067|gb|ACM54333.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroflexus sp. Y-400-fl]
          Length = 613

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 73/208 (35%), Gaps = 26/208 (12%)

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               R   PL+ + +   +++         LP           P  +A    ++ + L  
Sbjct: 81  PSLIRGQPPLVTVRAHTDTLLY-------LLPGAIFHRLRAEQPQFAAFFAASVIERLGY 133

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           AL   ++         +P      L    +           +     + DA  ++ ++R 
Sbjct: 134 ALQSRQS-------ESNPALFQTRLRDLVAR------PPVSISPEATVGDAARLMRDERI 180

Query: 252 GCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
             + V        GIIT+ D+  R   + L +T  V  VM      I  D L    + L+
Sbjct: 181 SSLIV---EHTPIGIITDRDLRNRVLAEGLPDTTPVRQVMSAPATTIAADALAFEGLLLM 237

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  I  L +V +  + +G+V   D+LR
Sbjct: 238 LERGIHHLPLV-EGDRVVGVVTHTDILR 264


>gi|218290241|ref|ZP_03494395.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|258512183|ref|YP_003185617.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
 gi|218239716|gb|EED06907.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
           LAA1]
 gi|257478909|gb|ACV59228.1| CBS domain containing protein [Alicyclobacillus acidocaldarius
           subsp. acidocaldarius DSM 446]
          Length = 145

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 43/116 (37%), Gaps = 2/116 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD 279
                    +        +  A   +  +  G + V  E +++ GI+T+ DI  +   + 
Sbjct: 2   KVQQIMTTDVACCSATDSIQKAAQAMKRENCGSIPVC-ENRRVVGIVTDRDIVLKAVAQG 60

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                VED M K       D     A  L+ QH I  L +VD+     GI+   DL
Sbjct: 61  KCDARVEDCMTKAVVTGRPDMDAHEAADLMAQHQIRRLPIVDERGDLCGILSIGDL 116



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+ +M  +         +  A Q +++ N   + V  + ++ +GIV   D++
Sbjct: 1   MKVQQIMTTDVACCSATDSIQKAAQAMKRENCGSIPVC-ENRRVVGIVTDRDIV 53



 Score = 36.0 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 25/62 (40%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A        ++   +      +A  ++++ +   + +VDE   L GI++ G
Sbjct: 55  KAVAQGKCDARVEDCMTKAVVTGRPDMDAHEAADLMAQHQIRRLPIVDERGDLCGILSIG 114

Query: 271 DI 272
           D+
Sbjct: 115 DL 116


>gi|187777213|ref|ZP_02993686.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
           15579]
 gi|187774141|gb|EDU37943.1| hypothetical protein CLOSPO_00759 [Clostridium sporogenes ATCC
           15579]
          Length = 144

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
              ++  V     +  A  ++SE   G + +  E  K+ G+IT+ D  +    +   N +
Sbjct: 13  MTQNVATVNRNDSVEKAARLMSEHNVGSIPIC-ENNKVVGVITDRDIALRSVANGSDNNI 71

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V D+M  NP V  +D  +  A +++ +  I  L V +D +  +GIV   D+
Sbjct: 72  KVGDIMTSNPVVANKDMDIHDAARIMSERQIRRLPV-EDNKNIVGIVSLGDI 122



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V DVM +N   +  +  +  A +L+ +HN+  + +  +  K +G++   D+
Sbjct: 7   MKVMDVMTQNVATVNRNDSVEKAARLMSEHNVGSIPIC-ENNKVVGVITDRDI 58


>gi|146309111|ref|YP_001189576.1| CBS domain-containing protein [Pseudomonas mendocina ymp]
 gi|145577312|gb|ABP86844.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Pseudomonas mendocina ymp]
          Length = 643

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
                PL +A+ ++ E+  G + VVD   +  GI T  D+ R      +    + ++M  
Sbjct: 190 CAPQTPLREAVRLMHEQHVGSIVVVDPDNRPLGIFTLRDLRRVVADGADLAQPISNLMTP 249

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            P  +  D     A   + + +I+ + +VD   K  G++   DL
Sbjct: 250 RPFHLPPDASAFDAAIAMTERHIAHVCLVDHE-KLCGVISERDL 292



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + ++ ++ P      T L  A++L+ + ++  ++VVD   + +GI    DL R
Sbjct: 176 DTRLGELAMRQPIGCAPQTPLREAVRLMHEQHVGSIVVVDPDNRPLGIFTLRDLRR 231



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                  +       DA   ++E+    V +VD  +KL G+I+E D+
Sbjct: 247 MTPRPFHLPPDASAFDAAIAMTERHIAHVCLVD-HEKLCGVISERDL 292


>gi|114327811|ref|YP_744968.1| inosine-5'-monophosphate dehydrogenase [Granulibacter bethesdensis
           CGDNIH1]
 gi|114315985|gb|ABI62045.1| inosine-5'-monophosphate dehydrogenase [Granulibacter bethesdensis
           CGDNIH1]
          Length = 506

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ +         +  +     ++  +    S ++ +  + 
Sbjct: 59  NIPLVSSAMDTVTEANMAIAMAQHGGIGVIHKNLTIEEQAQQVRRVKKYESGMVVNPLT- 117

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             +     L DA  ++S      V VV+ E  +L GI+T  D+       +    V ++M
Sbjct: 118 --IHPDQTLADARALMSSNHISGVPVVERESGRLVGILTNRDVRFATDPSVR---VYELM 172

Query: 290 IK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + N   +   T    A  LL +H I  L+VVD+    +G++   D+ + 
Sbjct: 173 TRENLVTVSPGTNPEEARTLLHRHRIEKLLVVDENYCCVGLITVKDMDKA 222


>gi|332974599|gb|EGK11519.1| transcriptional regulator HexR [Kingella kingae ATCC 23330]
          Length = 283

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 7/173 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      L     SL+ +   +   A+  +   + R+   G+G SG +          
Sbjct: 96  KVLGNTAAALLGARRSLKED---ELENAIAMLTHAR-RIEFYGLGNSGIVAQDAQHKFFR 151

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              +++  D+++V+S SGSS E+   +  A+     +IAIT  +
Sbjct: 152 FGISTVAYSDTHIQLMAASVLSSHDVLVVISNSGSSIEVLDAVSIAKENGAQVIAIT-RS 210

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            S +A  AD VL L  + +S  +   P  S ++QLAI D LAI L      + 
Sbjct: 211 DSPLAQLADCVLALVVQEDSNRY--TPMISRLLQLAIIDILAIGLALRLGETA 261


>gi|323527335|ref|YP_004229488.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1001]
 gi|323384337|gb|ADX56428.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1001]
          Length = 281

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 65/172 (37%), Gaps = 7/172 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A +        L  + ++L    S     A++ +   K R+   G G SG     +    
Sbjct: 94  AAKVFDRTIGALIQVRNTLS---SDSVAAAIDVLAQAK-RIEFYGAGGSGIAALDMQHKF 149

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G PS              M+   D+++ +S +G + ++      A      +IAIT 
Sbjct: 150 FRLGMPSVAYSDPHTFLMSAAMLGEGDVVVAISNTGRTRDIVDAAKSAVAGGAKVIAIT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              S +A  A + L    + ++     +P TS    LAIGD LA+ +   R 
Sbjct: 209 HGNSPLARVASVGLFANVDEDTDIF--SPMTSRTSHLAIGDILAVGVALQRG 258


>gi|254695462|ref|ZP_05157290.1| inosine 5'-monophosphate dehydrogenase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 497

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 105 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 161

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 162 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKDRCVGLVTVKDI 209


>gi|229017581|ref|ZP_04174476.1| RpiR family transcriptional regulator [Bacillus cereus AH1273]
 gi|229023798|ref|ZP_04180283.1| RpiR family transcriptional regulator [Bacillus cereus AH1272]
 gi|228737483|gb|EEL87993.1| RpiR family transcriptional regulator [Bacillus cereus AH1272]
 gi|228743724|gb|EEL93829.1| RpiR family transcriptional regulator [Bacillus cereus AH1273]
          Length = 284

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H           ++++ V  A +   +    ++ L+ +L          AV  +   K R
Sbjct: 80  HTPMQNIHEEVSVEDNMVTVAKKVFHSH---ITGLQDTLHLLNDNALEQAVSALNEAK-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  A I L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGARIIAITSYQKSALSQLAHITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|14590496|ref|NP_142564.1| hypothetical protein PH0600 [Pyrococcus horikoshii OT3]
 gi|3257006|dbj|BAA29689.1| 392aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 392

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V       P+VK    L  A  +L E     + V +   ++ G+I++  +  R  
Sbjct: 64  PTKAKVRDIYKPAPVVKPTDDLSHAAKLLLETDLRSLPVGENKAEIIGVISDIALLERVV 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     VE+ M K+   +  D  +  A+ ++R H IS + +V++  K  G+V   DL+
Sbjct: 124 AEEFGKKKVEEFMTKDVITLTPDDTVAKALAVMRDHGISRIPIVNEEGKLEGLVTLHDLI 183



 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 56/139 (40%), Gaps = 15/139 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +   F            +  +     +  A+ ++ +     + +V+E  KL+G++T  D+
Sbjct: 123 VAEEFGKKKVEEFMTKDVITLTPDDTVAKALAVMRDHGISRIPIVNEEGKLEGLVTLHDL 182

Query: 273 FRNFHKDLNT---------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              F K                   + + + MI+    IL    +  A+  ++ ++I  L
Sbjct: 183 ILRFIKPRFKAQTGELVGEKIPPFSMKLREAMIRGVITILPTATVREAVATMKDNDIDGL 242

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +VVD+  K +GI+   DLL
Sbjct: 243 VVVDEGNKVVGILTVKDLL 261



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 48/100 (48%), Gaps = 3/100 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHKDLNTLSVEDVMIK 291
           + I  PL +AI I+ ++    + V D+    KG++T +  I  +   D     V D+   
Sbjct: 17  IDISAPLSEAIGIIEKEDPDLILVFDDN-VYKGVLTQDLIIRSHLKWDPTKAKVRDIYKP 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            P V+     L+ A +LL + ++  L V ++  + IG++ 
Sbjct: 76  AP-VVKPTDDLSHAAKLLLETDLRSLPVGENKAEIIGVIS 114


>gi|324991875|gb|EGC23798.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK405]
 gi|324996235|gb|EGC28145.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK678]
 gi|327458499|gb|EGF04849.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1]
 gi|327471599|gb|EGF17042.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK408]
 gi|327490329|gb|EGF22116.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1058]
          Length = 507

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 114 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 170

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 171 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 220


>gi|291286024|ref|YP_003502840.1| inosine-5'-monophosphate dehydrogenase [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290883184|gb|ADD66884.1| inosine-5'-monophosphate dehydrogenase [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 489

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           +H    +         V  S   + +
Sbjct: 43  NIPLVSAAMDTVTEARLAIAIAQEGGIG-----FIHKNMSIEEQAAEVDKVKRSESGMIV 97

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA+ ++ + +   V V+D GQKL GI+T  D+   F +D  T +V   
Sbjct: 98  DPVTISPDKTVQDALDLMGKYKISGVPVID-GQKLVGILTNRDLR--FVEDF-TANVTKF 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N   +   T L  +M+ L++H I  L+VVDD  K  G++   D+
Sbjct: 154 MTSENLVTVPVGTSLEESMRHLQKHRIEKLLVVDDAFKLKGLITIKDI 201



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 29/53 (54%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + +++  V +G  L +++  L + R   + VVD+  KLKG+IT  DI +  
Sbjct: 153 FMTSENLVTVPVGTSLEESMRHLQKHRIEKLLVVDDAFKLKGLITIKDINKRI 205


>gi|91785191|ref|YP_560397.1| RpiR family transcriptional regulator [Burkholderia xenovorans
           LB400]
 gi|91689145|gb|ABE32345.1| transcriptional regulator, RpiR family [Burkholderia xenovorans
           LB400]
          Length = 273

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L              AVE +     R+   G G SG     +       G PS  
Sbjct: 92  RTIGTLIEVRNSLSPDSVEAAVELLANAA-RIEFYGAGGSGIAAQDIQHKFFRLGMPSVA 150

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      +IAIT    S +A  
Sbjct: 151 YSDPHTYSMSAALLGPGDVVVAVSNTGRTRDIIEAARSALARGAKVIAIT-HGSSPLARV 209

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A I L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 210 ASICLFSNVVEENDVF--SPMTSRMSHLAIGDILAVGVALRRG 250


>gi|332308384|ref|YP_004436235.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332175713|gb|AEE24967.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 282

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L  +        FH AV+ +K+ K R++I G+G S  +G   +  L   G  +    
Sbjct: 105 VAVLTETKNLNEEAAFHQAVDLLKSAK-RILICGLGGSALVGKDFSYKLQKLGMLAIEEP 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A       ++ +D++  +S SGS+ E+  ++  A++ +  +I +T    + V+  AD
Sbjct: 164 DMHAQLAFAATLSENDVVFAISESGSTREIVNVVKQAKQNNCKVITVTRYGATPVSDLAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           I L    E ES         +   Q  I D L IA+ +S
Sbjct: 224 IKLYSVAEEESARLSSI--MARTAQEFIIDILFIAITQS 260


>gi|283455547|ref|YP_003360111.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium dentium
           Bd1]
 gi|283102181|gb|ADB09287.1| guaB Inosine-5'-monophosphate dehydrogenase [Bifidobacterium
           dentium Bd1]
          Length = 485

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 4/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +RN      +                       + PL
Sbjct: 28  KVPAISAAMDTVTESDMAIAM--ARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMINNPL 85

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +        + VVD+  KL GIIT  D+     +D + L V DVM +
Sbjct: 86  TVSPDVTLADLDKLCGRFHISGLPVVDKDNKLVGIITNRDMRFIASEDYDHLKVSDVMTR 145

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      +     A  LL ++ +  L +VD      G++   D ++
Sbjct: 146 EHLITGPSNISKEDAHDLLAKYKVEKLPLVDAEGHLTGLITVKDFVK 192


>gi|87312318|ref|ZP_01094414.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
           3645]
 gi|87284963|gb|EAQ76901.1| hypothetical protein DSM3645_04350 [Blastopirellula marina DSM
           3645]
          Length = 174

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 3/133 (2%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   +               +        PL D +T+LS    G V + D+  +  GI +
Sbjct: 30  PKSSVEAALRRDVIAQLPMRTPLTSSPDAPLGDVLTVLSTNAIGAVVITDDHHRPIGIFS 89

Query: 269 EGDIFRNFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           E D         +D  +  +   M  +P+ + ++T +T A+  +   +   L VVDD  +
Sbjct: 90  ERDALLRLGPDYRDHLSTPISHFMTPDPQSVDKNTPITFAVHQMDVGHYRHLPVVDDEGR 149

Query: 326 AIGIVHFLDLLRF 338
              ++   DLLR+
Sbjct: 150 VKAVISIRDLLRY 162



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 5/129 (3%)

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN---FSENDFYVL 207
            +       L +     S P         ++      A+ I     R    FSE D  +L
Sbjct: 37  ALRRDVIAQLPMRTPLTSSPDAPLGDVLTVLSTNAIGAVVITDDHHRPIGIFSERD-ALL 95

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
             G               + D    V    P+  A+  +    +  + VVD+  ++K +I
Sbjct: 96  RLGPDYRDHLSTPISHFMTPDPQS-VDKNTPITFAVHQMDVGHYRHLPVVDDEGRVKAVI 154

Query: 268 TEGDIFRNF 276
           +  D+ R  
Sbjct: 155 SIRDLLRYL 163


>gi|325970898|ref|YP_004247089.1| hypothetical protein SpiBuddy_1070 [Spirochaeta sp. Buddy]
 gi|324026136|gb|ADY12895.1| CBS domain containing membrane protein [Spirochaeta sp. Buddy]
          Length = 147

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 6/113 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-----SVED 287
           +     L  A+  L+E + G + V++E   +KGI++E DI R+F K L  L      V +
Sbjct: 18  IGPDDALSHALLKLTEHKIGALLVLNEQGDIKGILSERDIIRHFSKRLEHLNTASIKVRE 77

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           VM      +         + L+   +   L VV+D  K IG++   D+++  +
Sbjct: 78  VMTTGVTYVKPHQSSEDCLHLMTAGHFRHLPVVEDD-KVIGMISIGDVVKAAL 129



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I  D  L+ A+  L +H I  L+V+++     GI+   D++R
Sbjct: 16  ISIGPDDALSHALLKLTEHKIGALLVLNEQGDIKGILSERDIIR 59


>gi|254417940|ref|ZP_05031664.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas sp. BAL3]
 gi|196184117|gb|EDX79093.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas sp. BAL3]
          Length = 485

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/191 (20%), Positives = 70/191 (36%), Gaps = 12/191 (6%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           +     ++ +  +         P  S+ M       LAIA+ +S         VLH    
Sbjct: 19  SEFMPAMVDVSTQLTRDIKLNIPLLSSAMDTVTESRLAIAMAQSGGLG-----VLHRNMT 73

Query: 213 LGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGII 267
           +         V         +   V     L +   I++ K+     VVD    KL G++
Sbjct: 74  IEEQADQVRAVKRYESGMVVNPVTVGPQTTLGEVREIVARKKITGFPVVDPATGKLVGML 133

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  D+   F  DLN  +   +   +   + E      A  LL+   I  ++VVD+  +A+
Sbjct: 134 THRDMR--FENDLNLTAASLMTTGDLITVREGASREEARDLLKTRKIERVIVVDEDYRAV 191

Query: 328 GIVHFLDLLRF 338
           G++   D+ + 
Sbjct: 192 GLITMKDIEKA 202


>gi|154151582|ref|YP_001405200.1| homoserine O-acetyltransferase [Candidatus Methanoregula boonei
           6A8]
 gi|154000134|gb|ABS56557.1| homoserine O-acetyltransferase [Methanoregula boonei 6A8]
          Length = 491

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/183 (17%), Positives = 69/183 (37%), Gaps = 11/183 (6%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  A  V+++  +    P+      +A+          +   E R+   +D ++L  G  
Sbjct: 303 AKAAFFVISVTSDWLYPPYQSQEIVTALTTNERE----VQYCEIRSNYGHDAFLLESGQL 358

Query: 213 L----GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                  L       + + +    ++ G  +      +       + V+    +L GI+T
Sbjct: 359 NYLISRFLSHTVVGDVMARNVEC-IEEGTTIAVTARRMITSGVNHLPVLSPAGQLVGIVT 417

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI +    +   L  +++M +N     E+  +  A + +  H+IS L V+D     IG
Sbjct: 418 SWDIAKAVASNFLWL--DEIMSRNVVTTTENEPVDEAARKMEAHSISALPVIDGDSHVIG 475

Query: 329 IVH 331
           ++ 
Sbjct: 476 LIT 478



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 32/69 (46%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +     + L+   V DVM +N + I E T + V  + +    ++ L V+    + +GI
Sbjct: 356 GQLNYLISRFLSHTVVGDVMARNVECIEEGTTIAVTARRMITSGVNHLPVLSPAGQLVGI 415

Query: 330 VHFLDLLRF 338
           V   D+ + 
Sbjct: 416 VTSWDIAKA 424


>gi|114707817|ref|ZP_01440711.1| inositol-5-monophosphate dehydrogenase [Fulvimarina pelagi
           HTCC2506]
 gi|114536806|gb|EAU39936.1| inositol-5-monophosphate dehydrogenase [Fulvimarina pelagi
           HTCC2506]
          Length = 500

 Score = 90.7 bits (224), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ALAIA+ ++            P  +   +            +   
Sbjct: 46  NIPILSAAMDTVTESALAIAVAQAGGIGVIH-RNFTPVEQAEQVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-------QKLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA  ++++ R   + VV++G        KL GI+T  D+        +   +
Sbjct: 105 IGPEATLGDARALMAQHRISGIPVVEKGNNGGTALGKLVGILTNRDVRFASD---DGQPI 161

Query: 286 EDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M K+    + E      A +LL QH I  L+V D+    IG++   D+
Sbjct: 162 HELMTKDDLVTVNESVTQKEAKRLLHQHRIEKLLVTDNQGFCIGLITVKDI 212


>gi|282162967|ref|YP_003355352.1| hypothetical protein MCP_0297 [Methanocella paludicola SANAE]
 gi|282155281|dbj|BAI60369.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 325

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  V+    L DAI ++ ++  G V V+D    + GIITE DI R     ++   V
Sbjct: 133 MEEDVATVQDDASLDDAIKVMIDRSVGGVPVIDPESIVVGIITERDIVRLMGDSVSGTKV 192

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M +       +  +  A + + +     L VV D     GI+   D++R+
Sbjct: 193 RDIMSRRVTTAPPNMPIETAAKTMIESGFRRLPVVTDS-YVCGIITATDIMRY 244



 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 47/116 (40%), Gaps = 15/116 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------L 280
               P+  A   + E  F  + VV +   + GIIT  DI R                   
Sbjct: 204 PPNMPIETAAKTMIESGFRRLPVVTDS-YVCGIITATDIMRYLGNGEAFKKLVTGNVSEA 262

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ +  +M  +   +  D  L    +++RQ+ I  L V+ + Q+ +GIV   D+L
Sbjct: 263 FSVPISGIMKSDIVTVGPDQDLGETARIMRQNKIGSLPVI-ENQQLVGIVTERDVL 317



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 17/114 (14%)

Query: 242 AITILSEKRFGCVAVVDEG-QKLKGIITEGDI---------FRNFHKDLN-------TLS 284
           A   +    +  + V D G ++LKGI T  DI          R   +  +          
Sbjct: 69  AARTMVGYGYRRLPVADAGTKRLKGICTVIDIIDFLGGGEKRRIIDRVYDGNMIVAINGP 128

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++M ++   + +D  L  A++++   ++  + V+D     +GI+   D++R 
Sbjct: 129 ITEIMEEDVATVQDDASLDDAIKVMIDRSVGGVPVIDPESIVVGIITERDIVRL 182


>gi|261364129|ref|ZP_05977012.1| transcriptional regulator HexR [Neisseria mucosa ATCC 25996]
 gi|288567712|gb|EFC89272.1| transcriptional regulator HexR [Neisseria mucosa ATCC 25996]
          Length = 282

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 45/196 (22%), Positives = 79/196 (40%), Gaps = 14/196 (7%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
             + H +  T    S++    +  A  SI+ E+R L             +   A+  +  
Sbjct: 77  MPYVHEELNTDDDMSVVVEKVLGNAAASILGERRFLKE----------SELENAIATLMH 126

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G+G SG +           G  +              ++T  D+++ +S +G
Sbjct: 127 AR-RVEFYGVGNSGIVAQDAQHKFFRFGISTVSYVDTHTQLMAASVLTDQDVLVAISNTG 185

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           SS EL   +  A+     +IA+T    S +A  AD VL++  +  +  +   P  S ++Q
Sbjct: 186 SSIELLDAVSIAKENGAAVIALTRN-DSPLAQLADCVLSIATQENAELY--TPMVSRLLQ 242

Query: 183 LAIGDALAIALLESRN 198
           LA+ D LAI L     
Sbjct: 243 LAVIDILAIGLALRLG 258


>gi|29828417|ref|NP_823051.1| oxidoreductase [Streptomyces avermitilis MA-4680]
 gi|29605520|dbj|BAC69586.1| putative oxidoreductase [Streptomyces avermitilis MA-4680]
          Length = 148

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    L++A  ++  +  G V V  +  +L G++T+ DI  R      D  T+S + V 
Sbjct: 16  VRPDASLVEAAQLMRAQDVGDVLVTLDQ-QLVGVLTDRDIALRAVADGVDPRTVSAQGVC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             NP VI  D  ++ A+ L+R+H +  L VV +    +G+V   DL
Sbjct: 75  TTNPVVIGPDEPVSAAVALMREHTVRRLPVV-EDGHPVGMVSLGDL 119



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           V +VM      +  D  L  A QL+R  ++  ++V    Q+ +G++   D+ LR 
Sbjct: 5   VREVMTPGVVAVRPDASLVEAAQLMRAQDVGDVLVT-LDQQLVGVLTDRDIALRA 58


>gi|328884502|emb|CCA57741.1| Inosine-5-monophosphate dehydrogenase [Streptomyces venezuelae ATCC
           10712]
          Length = 500

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTESRMAIAMARLGGVGVLHRNLSVED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V     KL GI+T  D+   F  D  +  V
Sbjct: 101 MVTDPITVHPEATLAEADALCAKFRISGVPVTSPDGKLLGIVTNRDM--AFESD-RSRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM+LLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 REVMTPMPLVTGKVGISGVDAMELLRRHKIEKLPLVDDAGVLKGLITVKDFVKA 211


>gi|307331080|ref|ZP_07610209.1| inosine-5'-monophosphate dehydrogenase [Streptomyces violaceusniger
           Tu 4113]
 gi|306883291|gb|EFN14348.1| inosine-5'-monophosphate dehydrogenase [Streptomyces violaceusniger
           Tu 4113]
          Length = 500

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 44/171 (25%), Positives = 63/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            VLH    +         V  S      
Sbjct: 49  NVPLLSAAMDKVTESRMAIAMARQGGVG-----VLHRNLSIEDQANQVDLVKRSESGMVT 103

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    L +A  + ++ R   V V D   KL GI+T  D+     +      V +V
Sbjct: 104 DPITVRPDATLHEADALCAKFRISGVPVTDAVGKLLGIVTNRDMAFEVDRG---RQVREV 160

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   P V  +       AMQLLR+H I  L +VDD     G++   D ++ 
Sbjct: 161 MTPMPLVTGKVGISGEDAMQLLRRHKIEKLPLVDDAGVLKGLITVKDFVKA 211


>gi|237736459|ref|ZP_04566940.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium mortiferum
           ATCC 9817]
 gi|229421501|gb|EEO36548.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium mortiferum
           ATCC 9817]
          Length = 486

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 68/166 (40%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++ +  ++
Sbjct: 44  NIPILSAAMDTVTESDLAIALARQGGIGFIHKNMSIEDQAAEVDRVKRIESGMIRNPVTL 103

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                 C +  A  ++   +   + V++   KL GI+T  DI   +HKD+  L V D+M 
Sbjct: 104 T---ADCTVGQAEDLMRRYKISGLPVIEGEGKLIGIVTNRDIK--YHKDMGQL-VGDMMT 157

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A ++L  + I  L + D+     G++   D+
Sbjct: 158 KDNLITAPVGTTLDQAKEILLSNRIEKLPITDENGYLKGLITIKDI 203


>gi|167772880|ref|ZP_02444933.1| hypothetical protein ANACOL_04268 [Anaerotruncus colihominis DSM
           17241]
 gi|167664813|gb|EDS08943.1| hypothetical protein ANACOL_04268 [Anaerotruncus colihominis DSM
           17241]
          Length = 490

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            +P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 47  NSPFLSAAMDTVTTSKMAIAMAREGGIG-----IIHKNMSIEAQADEIDTVKRSENGVIA 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  I+ + +   V +  E  KL GI+T  D+   F +D  ++ +++V
Sbjct: 102 DPFYLSPEHFVYDADEIMGKYKISGVPIC-ENGKLVGILTNRDLR--FLED-YSIKIKEV 157

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K +       T L  A Q+LR+H I  L +VD      G++   D+ + 
Sbjct: 158 MTKDHLVTAPVGTTLDDARQILRKHKIEKLPIVDAQGYLKGLITIKDIEKA 208


>gi|325695751|gb|EGD37650.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK150]
 gi|327463825|gb|EGF10141.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1057]
 gi|327467747|gb|EGF13241.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK330]
 gi|328945165|gb|EGG39320.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1087]
 gi|332363595|gb|EGJ41376.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1059]
          Length = 507

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 114 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 170

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 171 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 220


>gi|85059727|ref|YP_455429.1| inositol-5-monophosphate dehydrogenase [Sodalis glossinidius str.
           'morsitans']
 gi|84780247|dbj|BAE75024.1| inosine-5'-monophosphate dehydrogenase [Sodalis glossinidius str.
           'morsitans']
          Length = 487

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      +LAIAL +     F   +  +     ++G +    S V+    + 
Sbjct: 41  NIPMLSAAMDTVTESSLAIALAQEGGIGFIHKNMSIERQAEEVGRVKRHESGVV---TNP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   + +   F    VV +  +L GIIT  DI   F  DL +  V  VM 
Sbjct: 98  QCVTPNTTLSEVKALTARNGFAGYPVVTDENELVGIITGRDIR--FVTDL-SQPVSAVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E     V +  + +  +   +VVD+    +G++   D  +  
Sbjct: 155 PKELLVTVKEGEAREVVLAKMHERRVEKALVVDEQFHLLGMITVKDFQKAK 205


>gi|54294611|ref|YP_127026.1| hypothetical protein lpl1687 [Legionella pneumophila str. Lens]
 gi|53754443|emb|CAH15927.1| hypothetical protein lpl1687 [Legionella pneumophila str. Lens]
 gi|307610419|emb|CBW99989.1| hypothetical protein LPW_17461 [Legionella pneumophila 130b]
          Length = 490

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 42  NMPLISAAMDTVTEARLAIALAQEGGLG-----IIHKNMSIADQAEEVRRVKKFESGMVK 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++++  F  V VVD G+ L GI+T  DI   F  ++N L+V  V
Sbjct: 97  DPISVTPDLTVKELLAVMTKYNFSGVPVVD-GKHLVGIVTSRDIR--FETNMN-LTVAQV 152

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M    +   + E         LL +H I  L+VV++  +  G++   D+ +  
Sbjct: 153 MTPKGRLVTVKEGASREEVRSLLHKHRIEKLLVVNESFELRGLITVKDIQKAK 205


>gi|298369128|ref|ZP_06980446.1| transcriptional regulator, RpiR family [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298283131|gb|EFI24618.1| transcriptional regulator, RpiR family [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 285

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 7/170 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      +      LQ     +   AV  +   + RV   G+G SG +          
Sbjct: 96  KVLSNTAASILGERRVLQES---ELENAVAMLLHAR-RVEFYGVGNSGIVAQDAQHKFFR 151

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              ++T  D+++ +S SGSS EL   +  A+     +IAIT   
Sbjct: 152 FGISTVAYVDTHTQLMAAAVLTDKDVLVAVSNSGSSIELLDAVSIAKENGTSVIAITRN- 210

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            S +A  AD VL++  +     +   P  S ++QLA+ D LAI L     
Sbjct: 211 DSPLAQLADCVLSIATQENIEVY--TPMVSRLLQLAVIDILAIGLALRLG 258


>gi|291279824|ref|YP_003496659.1| signal transduction protein [Deferribacter desulfuricans SSM1]
 gi|290754526|dbj|BAI80903.1| signal transduction protein [Deferribacter desulfuricans SSM1]
          Length = 147

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA+ ++++   G V V+D G K+ GI TE D  R      K      +++VM
Sbjct: 19  VSADSTVYDALKVMADNNIGSVLVMD-GDKMVGIFTERDYARKLILKGKYSKDTPIKEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +    I  +      + L+ +  I  L V+    K IG++   D+++
Sbjct: 78  TEKVISIKPEATTEACLALMTEKRIRHLPVM-QDGKVIGLISIGDVVK 124



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/81 (18%), Positives = 33/81 (40%), Gaps = 3/81 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+         G             + +  +K        + +++EKR   + V+ 
Sbjct: 52  FTERDYA--RKLILKGKYSKDTPIKEVMTEKVISIKPEATTEACLALMTEKRIRHLPVM- 108

Query: 259 EGQKLKGIITEGDIFRNFHKD 279
           +  K+ G+I+ GD+ +   +D
Sbjct: 109 QDGKVIGLISIGDVVKQIIED 129



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/40 (25%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  D+ +  A++++  +NI  ++V+D   K +GI    D
Sbjct: 18  TVSADSTVYDALKVMADNNIGSVLVMDGD-KMVGIFTERD 56


>gi|83310691|ref|YP_420955.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82945532|dbj|BAE50396.1| CBS domain [Magnetospirillum magneticum AMB-1]
          Length = 145

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMI 290
                + +A   +  +R G V V D   KLKGI TE D +FR   + +N  T ++  VM 
Sbjct: 19  PAAATVREAARQMKARRVGAVMVTDHHGKLKGIFTERDCLFRVLAEGVNPDTTTLALVMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +P  I  D  L  A+ ++  +    + VVD     +G++   D L
Sbjct: 79  ADPTTITADRKLGHALHMMHDNGFRHIPVVDH-GIPVGMISIRDAL 123



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 16/42 (38%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     +  A + ++   +  +MV D   K  GI    D L
Sbjct: 17  TLPAAATVREAARQMKARRVGAVMVTDHHGKLKGIFTERDCL 58


>gi|302337838|ref|YP_003803044.1| signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635023|gb|ADK80450.1| putative signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
          Length = 147

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 7/112 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------HKDLNTLSVE 286
           V+    +  A++++SEK  G V V+D+ QK+ GI +E D  R         +    L V+
Sbjct: 18  VRPETTVFQALSLMSEKNVGAVVVLDDQQKMIGIFSERDYARKTIGAIGSQECPRDLPVK 77

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M      I  +T +   M L+ +     L V+ +    IGI+   D+++ 
Sbjct: 78  ELMTTEVVAIKPETGVETCMALMTKKRFRHLPVM-ENNALIGIISIGDIVKA 128



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 6/94 (6%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAV 256
           FSE D+      G +G+        +    +  +V  K    +   + ++++KRF  + V
Sbjct: 52  FSERDYAR-KTIGAIGSQECPRDLPVKELMTTEVVAIKPETGVETCMALMTKKRFRHLPV 110

Query: 257 VDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDV 288
           + E   L GII+ GDI +     KD     +E  
Sbjct: 111 M-ENNALIGIISIGDIVKAVITEKDFLIAKMEQY 143


>gi|17989241|ref|NP_541874.1| inosine 5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. 16M]
 gi|237817274|ref|ZP_04596266.1| inosine-5'-monophosphate dehydrogenase [Brucella abortus str. 2308
           A]
 gi|260756838|ref|ZP_05869186.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 6 str.
           870]
 gi|260760269|ref|ZP_05872617.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 4 str.
           292]
 gi|260763508|ref|ZP_05875840.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260882653|ref|ZP_05894267.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 9 str.
           C68]
 gi|265989692|ref|ZP_06102249.1| inositol-5-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|265993204|ref|ZP_06105761.1| inositol-5-monophosphate dehydrogenase [Brucella melitensis bv. 3
           str. Ether]
 gi|265999160|ref|ZP_05465220.2| IMP dehydrogenase/GMP reductase [Brucella melitensis bv. 2 str.
           63/9]
 gi|17985101|gb|AAL54138.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. 16M]
 gi|237788087|gb|EEP62303.1| inosine-5'-monophosphate dehydrogenase [Brucella abortus str. 2308
           A]
 gi|260670587|gb|EEX57527.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 4 str.
           292]
 gi|260673929|gb|EEX60750.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 2 str.
           86/8/59]
 gi|260676946|gb|EEX63767.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 6 str.
           870]
 gi|260872181|gb|EEX79250.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 9 str.
           C68]
 gi|262764074|gb|EEZ10106.1| inositol-5-monophosphate dehydrogenase [Brucella melitensis bv. 3
           str. Ether]
 gi|263000361|gb|EEZ13051.1| inositol-5-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|263092473|gb|EEZ16726.1| IMP dehydrogenase/GMP reductase [Brucella melitensis bv. 2 str.
           63/9]
          Length = 499

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 48  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 106

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 107 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 163

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 164 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKDRCVGLVTVKDI 211


>gi|302867253|ref|YP_003835890.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|302570112|gb|ADL46314.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
          Length = 234

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           V+ G    + + +L+E+      VVDE +++ G+++E D+                    
Sbjct: 17  VREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPQERRILPDRH 76

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R            D+M   P  I  D  +  A +L+    +  L VV+D  + +GIV  
Sbjct: 77  RREARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTR 136

Query: 333 LDLLR 337
            DLL+
Sbjct: 137 GDLLK 141



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + T  V+DVM ++   + E T     + +L + +++   VVD+ ++ +G+V   DL+
Sbjct: 1   MRTWQVQDVMTRDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLM 57



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 23/49 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +     +++A  ++  +    + VV++  +L GI+T GD+ +
Sbjct: 93  MTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTRGDLLK 141


>gi|261215847|ref|ZP_05930128.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 3 str.
           Tulya]
 gi|260917454|gb|EEX84315.1| inositol-5-monophosphate dehydrogenase [Brucella abortus bv. 3 str.
           Tulya]
          Length = 499

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 48  NLPLLSAAMDTVTESRLAIAMAQAGGIGVIH-RNLSPERQAEEVRQVKKFESGMVVNPVT 106

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     L DA  ++       + VV+       +L GI+T  D+            + ++
Sbjct: 107 IGPDATLADAQALMKAHGISGIPVVENATKGPGRLVGILTNRDVRFASDP---KQKIYEL 163

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N   + E+     A +LL  H I  L+VVDD  + +G+V   D+
Sbjct: 164 MTRENLITVHENVNQDEAKRLLHSHRIEKLLVVDDKDRCVGLVTVKDI 211


>gi|156937882|ref|YP_001435678.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566866|gb|ABU82271.1| putative signal-transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 143

 Score = 90.3 bits (223), Expect = 3e-16,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
               + ++ +   L +A   + +K  G + VVDE   + GIITE D+ R   +  +    
Sbjct: 10  MSKPVVVIGVNNTLREAAKEMMDKGVGSLVVVDEKGDVVGIITERDVVRAVAEGKDLNAP 69

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V +VM  +   +  +T +  A++ ++ HN+  L V  D +  +G+V   DL
Sbjct: 70  VSEVMTPDVLTVSPETSVLKAIETMKMHNVRHLPVASDDE-IVGMVSLKDL 119



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V DVM K   VI  +  L  A + +    +  L+VVD+    +GI+   D++R 
Sbjct: 5   TVADVMSKPVVVIGVNNTLREAAKEMMDKGVGSLVVVDEKGDVVGIITERDVVRA 59


>gi|294630970|ref|ZP_06709530.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14]
 gi|292834303|gb|EFF92652.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. e14]
          Length = 500

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        +   + +       
Sbjct: 49  NIPLLSAAMDKVTESRMAIAMARLGGVGVLHRNLSIED--------QANQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L +A  + ++ R     V D   KL GI+T  D+   F  D  +  V
Sbjct: 101 MVANPITIHPEATLAEADALCAKFRISGTPVTDPAGKLLGIVTNRDM--AFETD-RSRRV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM+LLR+H I  L +VDD     G++   D ++ 
Sbjct: 158 SEVMTPMPLVTGKVGISRADAMELLRRHKIEKLPLVDDAGILRGLITVKDFVKA 211


>gi|330470080|ref|YP_004407823.1| inosine-5'-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
 gi|328813051|gb|AEB47223.1| inosine-5'-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
          Length = 520

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 58/170 (34%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            VLH    +    +    V  S   +  
Sbjct: 69  SIPLLSSAMDTVTEARMAIAMARQGGIG-----VLHRNLSVEDQALQVDLVKRSESGMIT 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +   +    R   V VVD   +L GI+T  D+            V D+
Sbjct: 124 NPVTASPDDTLREVDQLCGRYRISGVPVVDAEGQLVGIVTNRDMRFVSDP---ATPVRDI 180

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + P V          A+ LLRQH +  L +VD   K  G++   D  +
Sbjct: 181 MTQPPLVTAPVGVSKDEALGLLRQHKVEKLPIVDGSGKLRGLITVKDFTK 230


>gi|257416671|ref|ZP_05593665.1| transcriptional regulator [Enterococcus faecalis AR01/DG]
 gi|257158499|gb|EEU88459.1| transcriptional regulator [Enterococcus faecalis ARO1/DG]
          Length = 284

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +  + + G+G S  +   +       G   
Sbjct: 103 QARFVHVVERSGQTLEDVAVNEAVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 161

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 162 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 221

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 222 EKSDIVLKTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 267


>gi|229818490|ref|ZP_04448771.1| hypothetical protein BIFANG_03798 [Bifidobacterium angulatum DSM
           20098]
 gi|229784360|gb|EEP20474.1| hypothetical protein BIFANG_03798 [Bifidobacterium angulatum DSM
           20098]
          Length = 517

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +RN      +                       + PL
Sbjct: 59  KVPVLSAAMDTVTEAEMAIAM--ARNGGIGVLHRNLSIDDQAAQVDVVKRSESGMITNPL 116

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     L D   +  + R   + VVD+  KL GIIT  D+     +D +TL V+DVM +
Sbjct: 117 TVSPEVTLADLDKLCGKFRISGLPVVDKDNKLVGIITNRDMRFIPSEDYDTLKVKDVMTR 176

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            N      +     A +LL +H +  L +VD      G++   D ++
Sbjct: 177 ENLITGPTNISKDDAHRLLAKHKVEKLPLVDSEGHLTGLITVKDFVK 223


>gi|134046258|ref|YP_001097743.1| CBS domain-containing protein [Methanococcus maripaludis C5]
 gi|132663883|gb|ABO35529.1| CBS domain containing protein [Methanococcus maripaludis C5]
          Length = 137

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     +ID+   L + +  C+ VV+E  ++ GI+T  DI  N   D  TL  ++ DVM 
Sbjct: 20  VAPESGVIDSFEALLKNKISCLPVVNENNEIIGIVTTTDIGYNLIIDKYTLETTIADVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    I ED     A++ +  H      I+ L VV+   K +GI+   D++R 
Sbjct: 80  KTVVTIGEDESAADALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDIIRA 132



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 32/59 (54%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K +  + ++D+M  +   +  ++ +  + + L ++ IS L VV++  + IGIV   D+
Sbjct: 1   MKKIKEIVIKDIMSSDVVSVAPESGVIDSFEALLKNKISCLPVVNENNEIIGIVTTTDI 59



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  +       DA+  +     G      + VV+   KL GI+++GDI R   K
Sbjct: 78  MTKTVVTIGEDESAADALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDIIRAISK 135


>gi|315506341|ref|YP_004085228.1| cbs domain containing membrane protein [Micromonospora sp. L5]
 gi|315412960|gb|ADU11077.1| CBS domain containing membrane protein [Micromonospora sp. L5]
          Length = 234

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           V+ G    + + +L+E+      VVDE +++ G+++E D+                    
Sbjct: 17  VREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLMYKVEFLGQPRERRILPDRH 76

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R            D+M   P  I  D  +  A +L+    +  L VV+D  + +GIV  
Sbjct: 77  RREARAKAGATLAADLMTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTR 136

Query: 333 LDLLR 337
            DLL+
Sbjct: 137 GDLLK 141



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + T  V+DVM ++   + E T     + +L + +++   VVD+ ++ +G+V   DL+
Sbjct: 1   MRTWQVQDVMTRDVASVREGTDYREIVDVLTERHVTAAPVVDETRRVLGVVSEADLM 57



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 23/49 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +     +++A  ++  +    + VV++  +L GI+T GD+ +
Sbjct: 93  MTAPPVTITPDATIVEAARLMDARGVKRLPVVNDLGRLVGIVTRGDLLK 141


>gi|15669059|ref|NP_247863.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2842580|sp|Q58278|Y868_METJA RecName: Full=Uncharacterized protein MJ0868
 gi|1591551|gb|AAB98873.1| inosine-5'-monophosphate dehydrogenase (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 127

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L D I  +++     V VV +G+   GIIT+ D+ +++  +    + E++M  N
Sbjct: 18  VTLDTKLSDVIKTMAKYDISSV-VVSDGETFWGIITDTDVLKHY--NDLDKTAEEIMTTN 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
           P  +  +  L  A++++ +  I  L V      K +G++   D+++ 
Sbjct: 75  PITVSPEAPLEKAVEIMAEKGIHHLYVKSPCEDKIVGVLSSKDIIKL 121



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V DVM K    +  DT L+  ++ + +++IS  +VV D +   GI+   D+L+
Sbjct: 7   VRDVMKKGVVEVTLDTKLSDVIKTMAKYDISS-VVVSDGETFWGIITDTDVLK 58


>gi|225174850|ref|ZP_03728847.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
 gi|225169490|gb|EEG78287.1| CBS domain containing protein [Dethiobacter alkaliphilus AHT 1]
          Length = 873

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  +     +  A   +         VV E   L GII+  D+ +  H  L    V
Sbjct: 313 MSEPVRSITPDTTVDKARERMLRYGHSGFPVV-ENGGLLGIISRRDLEKASHHGLGHAPV 371

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M K P+ +  DT +    QL+ ++N+  L V D+    +GIV   D+LR
Sbjct: 372 KGYMSKRPRTVPADTPVREIQQLMIEYNLGRLPVTDE-GTIVGIVTRTDVLR 422



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  D+M +  + I  DT +  A + + ++  S   VV++    +GI+   DL + 
Sbjct: 307 KTARDIMSEPVRSITPDTTVDKARERMLRYGHSGFPVVENGG-LLGIISRRDLEKA 361



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            A    +       V    P+ +   ++ E   G + V DE   + GI+T  D+ RN  
Sbjct: 368 HAPVKGYMSKRPRTVPADTPVREIQQLMIEYNLGRLPVTDE-GTIVGIVTRTDVLRNLE 425


>gi|229083325|ref|ZP_04215685.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-44]
 gi|228699972|gb|EEL52597.1| Inosine-5'-monophosphate dehydrogenase [Bacillus cereus Rock3-44]
          Length = 492

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 48  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEHVDKVKRSESGVIS 102

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V +V+  + +KL GIIT  D+   F +D  ++ + 
Sbjct: 103 DPFFLTPEHQVYDAEHLMGKYRISGVPIVNNLDEKKLVGIITNRDMR--FIQD-YSIKIS 159

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD+     G++   D+
Sbjct: 160 DVMTKEKLITAPVGTTLEEAEKILQKYKIEKLPLVDNSGVLQGLITIKDI 209


>gi|190346549|gb|EDK38658.2| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 551

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                        + +   ++S KR  CV +VD+ +KL G+ T  D+  R     L+   
Sbjct: 62  KPSEPVTCTKNTTIYEVAQLMSAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSGLDATV 121

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHF 332
            +V  VM  NP      +  + A+  + +H    + VV+D   + IG++  
Sbjct: 122 ATVGQVMTSNPLTSSATSPASQALDQMLEHKFRHMPVVEDSNTEIIGVLDI 172



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 3/124 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF 276
                V+ +        +   + +   ++       + + D   K+ GI++  D+ FR  
Sbjct: 227 PTIQSVVGNVSRPVFASLKATVYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAI 286

Query: 277 HKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              LN    SV  VM  NP V+   T +  A++ +   N   L V D     I +V  L 
Sbjct: 287 AAGLNPKICSVVRVMTANPDVVNTSTTIRQALKQMLDGNYLNLPVEDSSHSIIAVVDVLS 346

Query: 335 LLRF 338
           L+  
Sbjct: 347 LIHA 350



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R     + +L   +     P    ++T +    QL+     + +++VDD +K +G+   
Sbjct: 51  RRGLPGSVLSLKPSE-----PVTCTKNTTIYEVAQLMSAKRCNCVLIVDDHEKLLGLFTS 105

Query: 333 LDL 335
            DL
Sbjct: 106 KDL 108


>gi|119468952|ref|ZP_01611977.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium
           TW-7]
 gi|119447604|gb|EAW28871.1| inositol-5-monophosphate dehydrogenase [Alteromonadales bacterium
           TW-7]
          Length = 489

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    + ++      
Sbjct: 41  NLPLISASMDTVTEARLAIALAQEGGLGFIHKNMTIEEQAKNVRKVKTYEAGIV---SYP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + DA+ +  EK F    V D    L GI+T  D+   F   L    +  VM 
Sbjct: 98  VTVTADLTIADAMDLAEEKGFSGFPVTDPENTLVGIVTSRDMR--FETKL-EQPISTVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 KKEKLVTVKEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQKA 204



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 30/64 (46%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    S VM   + +  VK G    + + ++ E R   + VVD+  KLKG+IT  D  +
Sbjct: 144 KLEQPISTVMTKKEKLVTVKEGAAREEILGLMHEHRIEKILVVDDAFKLKGMITVKDYQK 203

Query: 275 NFHK 278
              K
Sbjct: 204 AQDK 207


>gi|120610791|ref|YP_970469.1| CBS domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120589255|gb|ABM32695.1| CBS domain containing membrane protein [Acidovorax citrulli
           AAC00-1]
          Length = 149

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     ++DA+ ++++K  G + V+D G+++ GI+TE D  R      +      V DVM
Sbjct: 19  IAPSDSMLDALRLMADKGIGALLVMD-GERIAGIVTERDYARKVALLGRTSGDTRVADVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  + +         + L+ ++ +  L VV++    +G++   DL++
Sbjct: 78  TRAVRFVRPAQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVK 125



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        LG              ++  V+        + ++SE R   + VV+E
Sbjct: 53  TERDYA--RKVALLGRTSGDTRVADVMTRAVRFVRPAQTSGQCLALMSENRLRHLPVVEE 110

Query: 260 GQKLKGIITEGDIFRNF 276
              L G+I+ GD+ ++ 
Sbjct: 111 DGTLVGLISIGDLVKDV 127



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 1/40 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            I     +  A++L+    I  L+V+D  ++  GIV   D
Sbjct: 18  TIAPSDSMLDALRLMADKGIGALLVMD-GERIAGIVTERD 56


>gi|302762132|ref|XP_002964488.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
 gi|302820740|ref|XP_002992036.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
 gi|300140158|gb|EFJ06885.1| hypothetical protein SELMODRAFT_134636 [Selaginella moellendorffii]
 gi|300168217|gb|EFJ34821.1| hypothetical protein SELMODRAFT_81478 [Selaginella moellendorffii]
          Length = 165

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 61/152 (40%), Gaps = 29/152 (19%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
               D M     +  V++   + DA+ +L + R   + V+DE  KL G++++ D+     
Sbjct: 1   YTVCDFMTPRKDLFCVRVSTTVDDALKLLVDNRITGLPVIDEDGKLVGVVSDYDLLALDS 60

Query: 274 -------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                    ++        +V D+M  +P V+  D  +  A ++
Sbjct: 61  ISGKRPSTNSLFPEAGSTWKAFKEIQHLLTKTQGKTVGDLMTPSPLVVRVDMNIEDAARI 120

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L       L VVD+C K +G++   +++R  +
Sbjct: 121 LLDTKYRRLPVVDECGKLVGLITRGNVVRAAL 152


>gi|51246682|ref|YP_066566.1| acetoin utilization protein AcuB [Desulfotalea psychrophila LSv54]
 gi|50877719|emb|CAG37559.1| related to acetoin utilization protein (AcuB) [Desulfotalea
           psychrophila LSv54]
          Length = 216

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 13/127 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------ 278
           +       +     L +A  IL   +F  + VVD+GQ+L GIIT+ D+   +        
Sbjct: 6   YMTPEPLTIYPHTLLPEARGILDAFKFRHLPVVDDGQRLLGIITDRDLRSAYPSSLESGE 65

Query: 279 -------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   +    V ++M  N   I     L  A+ L  +  +  + VV+D    +G+  
Sbjct: 66  ESSGKFLGVEKTPVSEIMTVNCATIHPQATLDDALFLFDREKVGGVPVVNDQDLVVGMFS 125

Query: 332 FLDLLRF 338
             DL+  
Sbjct: 126 IRDLIAA 132



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + M   P  I   TLL  A  +L       L VVDD Q+ +GI+   DL
Sbjct: 3   ISEYMTPEPLTIYPHTLLPEARGILDAFKFRHLPVVDDGQRLLGIITDRDL 53



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 22/51 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   +     L DA+ +   ++ G V VV++   + G+ +  D+   +
Sbjct: 83  MTVNCATIHPQATLDDALFLFDREKVGGVPVVNDQDLVVGMFSIRDLIAAY 133


>gi|239943665|ref|ZP_04695602.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           roseosporus NRRL 15998]
 gi|291447130|ref|ZP_06586520.1| inosine 5' monophosphate dehydrogenase [Streptomyces roseosporus
           NRRL 15998]
 gi|291350077|gb|EFE76981.1| inosine 5' monophosphate dehydrogenase [Streptomyces roseosporus
           NRRL 15998]
          Length = 500

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V
Sbjct: 101 MVTDPITVHPDATLGEADALCAKFRISGVPVTDAAGKLLGIVTNRDM--AFESD-RSRQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM+LLR+H I  L +VD+     G++   D  + 
Sbjct: 158 REVMTPMPLVTGKVGISGVEAMELLRRHKIEKLPLVDEAGLLKGLITVKDFKKA 211


>gi|325698041|gb|EGD39922.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK160]
          Length = 493

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T  D+      D     + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLRFISDYD---QPIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 157 RHMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 206


>gi|307823499|ref|ZP_07653728.1| Nucleotidyl transferase [Methylobacter tundripaludum SV96]
 gi|307735484|gb|EFO06332.1| Nucleotidyl transferase [Methylobacter tundripaludum SV96]
          Length = 350

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M       L+     L +AI ++         V D+  +L G++T+GDI R   + L+  
Sbjct: 1   MKHNWRNALINPQTSLQEAIRVIDAAALQIALVSDDLGRLSGVVTDGDIRRALMRGLSLD 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V +VM  NPKV   +   T    ++  HN+  L ++D  +K +G+     L +
Sbjct: 61  HAVAEVMNANPKVASINDSKTKMCAVMEAHNLIHLPILDADRKVVGLETLQGLYK 115


>gi|296284851|ref|ZP_06862849.1| hypothetical protein CbatJ_14581 [Citromicrobium bathyomarinum
           JL354]
          Length = 143

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LN 281
                I   +   P+ DA+T+L+EKR G + V+D G K+ GI +E D+            
Sbjct: 10  RDPHDIVSCQTQTPMRDAVTLLAEKRIGALPVMD-GGKVAGIFSERDVIYCMAAQGPSCL 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V +VM      +  D  +  A+ L+ +  I  L VV+D    +G V   DL++
Sbjct: 69  ERPVGEVMTSPAITVTRDQKIDQALALMTKRRIRHLPVVEDD-ALLGFVSIGDLVK 123


>gi|212704299|ref|ZP_03312427.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
 gi|212672261|gb|EEB32744.1| hypothetical protein DESPIG_02354 [Desulfovibrio piger ATCC 29098]
          Length = 218

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 12/118 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           VK    L+    +L E +   + VVD+  ++ GII++ D+                   L
Sbjct: 14  VKPDTSLLKCRNLLKEHQIRRLPVVDDQNRVVGIISDRDVKGASPSKATALEVHEMQYLL 73

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L  +D+M   P  I     +  A  L+       L VV +  K +GI+   D+ + 
Sbjct: 74  AELKAKDIMTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSEDNKLVGIITDQDIFKL 131



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/50 (38%), Positives = 26/50 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE+ M  N   +  DT L     LL++H I  L VVDD  + +GI+   D
Sbjct: 3   VENWMATNVIAVKPDTSLLKCRNLLKEHQIRRLPVVDDQNRVVGIISDRD 52



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  +K    +  A  ++ +K+FG + VV E  KL GIIT+ DIF+  
Sbjct: 82  MTAKPVTIKPWDSVEQAAILMMDKKFGGLPVVSEDNKLVGIITDQDIFKLL 132


>gi|114798278|ref|YP_761342.1| CBS domain-containing protein [Hyphomonas neptunium ATCC 15444]
 gi|114738452|gb|ABI76577.1| CBS domain protein [Hyphomonas neptunium ATCC 15444]
          Length = 144

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
           +    L +A  +L E+R G V  +D   ++ G+++E DI R F +       + V + M 
Sbjct: 18  RADDTLREAARLLDERRIGAVVTLDADGEIVGVLSERDIVRQFARQGEGALDMPVGNAMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +    I  D  +  A+QL+    I  L VV +  +  G V   DL+++ I
Sbjct: 78  RAVITISADAEVDEALQLMTDRRIRHLPVVRNS-RLTGFVSIGDLVKWKI 126



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 23/47 (48%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +  D  L  A +LL +  I  ++ +D   + +G++   D++R
Sbjct: 12  REVITLRADDTLREAARLLDERRIGAVVTLDADGEIVGVLSERDIVR 58


>gi|303325679|ref|ZP_07356122.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863595|gb|EFL86526.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 222

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 47/125 (37%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     L+    ++ +     + V+D+   + GII++ D+             
Sbjct: 7   MTTEVITVTPETSLLKIGKLMRDNSVRRLPVLDDKGHVVGIISDRDVRDASPSKATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L  L  +D+M   P  +     +  A  L+  +    L VV++  + +GI+   
Sbjct: 67  YEMHYLLAELKAKDIMTPRPFTVKPTDTVEKAAMLMLDNKFGGLPVVEESGRLVGIISDQ 126

Query: 334 DLLRF 338
           D+ + 
Sbjct: 127 DVFKA 131



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V++ M      +  +T L    +L+R +++  L V+DD    +GI+   D
Sbjct: 3   VQNWMTTEVITVTPETSLLKIGKLMRDNSVRRLPVLDDKGHVVGIISDRD 52



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    +  A  ++ + +FG + VV+E  +L GII++ D+F+  
Sbjct: 89  VKPTDTVEKAAMLMLDNKFGGLPVVEESGRLVGIISDQDVFKAL 132


>gi|288560464|ref|YP_003423950.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanobrevibacter
           ruminantium M1]
 gi|288543174|gb|ADC47058.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanobrevibacter
           ruminantium M1]
          Length = 497

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 66/164 (40%), Gaps = 3/164 (1%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +          +           V +++ + +   +  
Sbjct: 46  NIPIMSAAMDTVTEADLAIALAQEGGIGVIHRNINQEAQVAEVRKVKSAEDI-TVRDVVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +     I+  +    + V+ EG ++ GII++ D+      D   L V+++M  +
Sbjct: 105 ISPDSSIETVQDIMENESVSGLPVM-EGDRIVGIISKRDVRPFLKNDSKRL-VKEIMTSD 162

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I E+     A+ +  ++ +  L VV++    +GI+   D+L
Sbjct: 163 VVTIKENISQEEALDIAYENKVERLPVVNEDGALVGILTIKDIL 206


>gi|20093529|ref|NP_613376.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19886367|gb|AAM01306.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 393

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
                 V     +++AIT + +     + VV E  +  G++TE DI     +  +L  + 
Sbjct: 76  MMKPETVTPDTLIVEAITEMIDSGLRALPVV-EDGEFVGLVTEYDIIDVARESDELTKID 134

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +VM      I E+  +  A  ++R H IS L VV+D  K  GIV   D++R 
Sbjct: 135 AREVMSTPVITIHENDTIAKARAIMRDHGISRLPVVNDANKLRGIVTTTDIIRE 188



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 15/135 (11%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  +     +  A  I+ +     + VV++  KL+GI+T  DI R   K
Sbjct: 132 KIDAREVMSTPVITIHENDTIAKARAIMRDHGISRLPVVNDANKLRGIVTTTDIIREVIK 191

Query: 279 DLNTL---------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            +  L                V+++M         D  +    + + +H I  + +V+  
Sbjct: 192 PITRLGKMDRKGEKVPAFGHPVKNIMSSPCVRAEPDETVVDLCEKIVEHGIRGMPIVNKL 251

Query: 324 QKAIGIVHFLDLLRF 338
           ++ IG+V   D+LR 
Sbjct: 252 EEPIGVVTRRDILRK 266



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 3/117 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             ++M   + +   + G PL    + L       + +VD+  K+ G+I+  D+      D
Sbjct: 8   VEEIMTPAEEVITAEPGEPLSKIFSKLERHGVKEIPIVDD-GKVVGMISYYDVVDAHVAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +  E VM+K P+ +  DTL+  A+  +    +  L VV +  + +G+V   D++
Sbjct: 67  ISNVRPETVMMK-PETVTPDTLIVEAITEMIDSGLRALPVV-EDGEFVGLVTEYDII 121



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++    VE++M              L+     L +H +  + +VDD  K +G++ + D++
Sbjct: 2   EIFERPVEEIMTPAEEVITAEPGEPLSKIFSKLERHGVKEIPIVDD-GKVVGMISYYDVV 60

Query: 337 RF 338
             
Sbjct: 61  DA 62


>gi|108762340|ref|YP_635487.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108466220|gb|ABF91405.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 380

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 59/133 (44%), Gaps = 6/133 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G+     + A +VM         +   PL D   I+ ++  G V +VDE  +L GI+T+
Sbjct: 226 NGRWRHEALLAREVMTRNVRTA--RPESPLRDIARIMKDESCGVVPIVDERDRLVGIVTD 283

Query: 270 GDIF-RNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            D+  R F   +    L   DVM  + + +  D  L   + L+ +  +  + VV+     
Sbjct: 284 RDLVVRAFTGGRSPEQLRASDVMTDDVEAVTPDDTLHDVIGLMGRRQLRRIPVVERDDGI 343

Query: 327 IGIVHFLDL-LRF 338
           +GI+   D+ LR 
Sbjct: 344 VGIISLGDIALRA 356



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 32/66 (48%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D  RN       L   +VM +N +    ++ L    ++++  +  V+ +VD+  + +GIV
Sbjct: 222 DRARNGRWRHEALLAREVMTRNVRTARPESPLRDIARIMKDESCGVVPIVDERDRLVGIV 281

Query: 331 HFLDLL 336
              DL+
Sbjct: 282 TDRDLV 287



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V     L D I ++  ++   + VV+    + GII+ GDI      D       +
Sbjct: 313 VTPDDTLHDVIGLMGRRQLRRIPVVERDDGIVGIISLGDIALRADHDEELQQALE 367


>gi|229059934|ref|ZP_04197308.1| RpiR family transcriptional regulator [Bacillus cereus AH603]
 gi|228719347|gb|EEL70951.1| RpiR family transcriptional regulator [Bacillus cereus AH603]
          Length = 284

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 74/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H           ++++ V  A +   +    ++ L+ +L          AV  +   K R
Sbjct: 80  HTPMQNIHEEVSVEDNMVTVAKKVFHSH---ITGLQDTLHLLNDNALEQAVSALNEAK-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  A I L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKAKGAHIIAITSYQKSALSQLAHITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|226941745|ref|YP_002796819.1| hypothetical protein LHK_02830 [Laribacter hongkongensis HLHK9]
 gi|226716672|gb|ACO75810.1| CBS domain protein [Laribacter hongkongensis HLHK9]
          Length = 151

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 7/127 (5%)

Query: 216 LFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           +      ++   +  PL  V   C +  A+  L+E   G VAV+D G +L GI +E D  
Sbjct: 1   MSATVRQLLQDKNQPPLIAVSPDCTVFQALQKLAEHDIGAVAVMD-GPRLVGIFSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +   V  VM +   V+  DT  +  M ++    I  L V D+  + IG+V
Sbjct: 60  RRMILEGRQSSGTPVTAVMTERVIVVHPDTPASQCMAIMTDKRIRHLPVADN-GRVIGMV 118

Query: 331 HFLDLLR 337
              D++R
Sbjct: 119 SIGDVVR 125



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 3/76 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G             + + +V    P    + I+++KR   + V D
Sbjct: 53  FSERDYARRM--ILEGRQSSGTPVTAVMTERVIVVHPDTPASQCMAIMTDKRIRHLPVAD 110

Query: 259 EGQKLKGIITEGDIFR 274
              ++ G+++ GD+ R
Sbjct: 111 -NGRVIGMVSIGDVVR 125


>gi|18976459|ref|NP_577816.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Pyrococcus furiosus DSM 3638]
 gi|18891998|gb|AAL80211.1| inosine-5'-monophosphate dehydrogenase related protein iv
           [Pyrococcus furiosus DSM 3638]
          Length = 134

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           V     + +A  ++ E   G + V+DE   + G  T+ DI R            V+D+M 
Sbjct: 16  VTPDTTVQEASKLMMEFEIGSLVVIDEKGNVIGFFTKSDILRRVVVPGLPYDTPVKDIMT 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    +  +T L   ++ + +H I  +++ ++  K +GI    DLL  
Sbjct: 76  KELITVNSNTPLGEVLRKMARHRIKHILI-EEEGKIVGIFTLSDLLEA 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++  M K    +  DT +  A +L+ +  I  L+V+D+    IG     D+LR  ++
Sbjct: 2   KAPIKVYMTKKLIGVTPDTTVQEASKLMMEFEIGSLVVIDEKGNVIGFFTKSDILRRVVV 61



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
               +  V    PL + +  ++  R   + + +E  K+ GI T  D+     + L T 
Sbjct: 74  MTKELITVNSNTPLGEVLRKMARHRIKHILI-EEEGKIVGIFTLSDLLEASRRKLETA 130


>gi|294790667|ref|ZP_06755825.1| inosine-5'-monophosphate dehydrogenase [Scardovia inopinata F0304]
 gi|294458564|gb|EFG26917.1| inosine-5'-monophosphate dehydrogenase [Scardovia inopinata F0304]
          Length = 514

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 48/206 (23%), Positives = 72/206 (34%), Gaps = 17/206 (8%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIAL 193
                +    D VL LP E +  P                +P  SA M       +AIA+
Sbjct: 17  SPFQKLGLAYDDVLLLPNESDVIPSEVDTSTRLTRNITMKSPVLSAAMDTVTEAQMAIAM 76

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFG 252
             +RN      +         +             S PL V     L D   +       
Sbjct: 77  --ARNGGIGVLHRNLSIDDQASQVDIVKRSESGMISDPLTVSPDATLADLDKLCGTYHVS 134

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQ 311
            + V+D   +L GIIT  D+      D + L V DVM K N      +     A +LL +
Sbjct: 135 GLPVIDSDNRLVGIITNRDMRFIDSADYDRLHVRDVMTKDNLITGPANISKDDAHRLLAE 194

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  L +VDD  K  G++   D ++
Sbjct: 195 NKVEKLPLVDDEGKLTGLITVKDFVK 220


>gi|159897729|ref|YP_001543976.1| inosine-5'-monophosphate dehydrogenase [Herpetosiphon aurantiacus
           ATCC 23779]
 gi|159890768|gb|ABX03848.1| inosine-5'-monophosphate dehydrogenase [Herpetosiphon aurantiacus
           ATCC 23779]
          Length = 492

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIAL            ++H              V  S   +  
Sbjct: 46  NIPVVSSAMDTVTEDRMAIALAREGGLG-----IIHKNMAPAQQADLVRRVKRSESGMIT 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A  ++S+     V +     +L GI+T  D+   F  D  +  + ++
Sbjct: 101 DPITLRPEQTIGEAWELMSDYHISGVPITSAAGELVGILTNRDLR--FETD-PSRKISEL 157

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +    +   T L  A Q L QH I  ++VVD+  K  G++   D+ +
Sbjct: 158 MTSEELVTVPVGTTLEQAKQALHQHRIEKVLVVDEHGKLNGLITVKDIQK 207



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 27/67 (40%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                + + + +  V +G  L  A   L + R   V VVDE  KL G+IT  DI +    
Sbjct: 152 RKISELMTSEELVTVPVGTTLEQAKQALHQHRIEKVLVVDEHGKLNGLITVKDIQKQIEH 211

Query: 279 DLNTLSV 285
              T   
Sbjct: 212 PNATKDA 218


>gi|325182681|emb|CCA17136.1| myosin 29 putative [Albugo laibachii Nc14]
          Length = 3123

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 55/135 (40%), Gaps = 6/135 (4%)

Query: 205  YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              L P           + +  S      +     + D +T+++ +R  CV V DE   L 
Sbjct: 1817 RTLQPAALKKRQDRTVAQLGPSKVLT--ISDSASVKDLVTLMTRRRSQCVLVTDEEGTLC 1874

Query: 265  GIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T+ D+        + ++   V  +M ++P  +        A+ ++ +     L VV 
Sbjct: 1875 GIVTDTDLTHRVVSEKRSMDGCPVRAIMTRDPTFVSAQDSALNALCIMLEGKFRHLPVV- 1933

Query: 322  DCQKAIGIVHFLDLL 336
            + +  +GI+H  + L
Sbjct: 1934 NAKSIVGILHIGNCL 1948



 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 56/161 (34%), Gaps = 4/161 (2%)

Query: 176  TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VK 234
            T S +    +    A ++   R  + + +     G  +G        V        L + 
Sbjct: 2527 TESEVSMSVVDSKYARSVETRRQKTSSLYSFDGKGSAVGPSEGAFRPVSMLRPRSVLHID 2586

Query: 235  IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK 291
                + +A   +   R   V V  +   L+GI+T+ DI R     H D +T  V  VM  
Sbjct: 2587 ENDSVTEAARQMRHGRVDAVVVTTDDGDLRGILTDTDITRRVLGKHLDPDTCCVATVMTV 2646

Query: 292  NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            NP  +  D     A+  + +     L VV       GI+  
Sbjct: 2647 NPCCVQADESAIEAITKMLEGRFKHLPVVGKNGSISGILDI 2687



 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 239  LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKV 295
            + +A  ++S+       V+ +   L GI+T+ D+         D N   + DVM  +PK 
Sbjct: 2191 ISEAARVMSQSHADAALVISKEGVLSGILTDTDVTHRVVALGNDPNVTCIADVMTSSPKF 2250

Query: 296  ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + E+     AM ++ +     L VVD      GI+     L   +I
Sbjct: 2251 VDENDSAMQAMYIMLEGKFRHLPVVDSRGTVSGILRIQKCLHDAVI 2296



 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 44/125 (35%), Gaps = 3/125 (2%)

Query: 211  GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            G+  T     S           V     +  A  ++   R   V VV +   L GI T+ 
Sbjct: 1149 GQHNTHNSTRSVAHLRPSKALTVSESLTVFQAAELMQRNRTSAVLVVCDDSALSGIFTDT 1208

Query: 271  DIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D   R   + L+     +  VM   PK +  +     A+ ++       L VV    + +
Sbjct: 1209 DTAQRVLGRGLDPSATLIGAVMTPKPKFVTLEDSAMDALDMMVTGVFRHLPVVSKEGQVV 1268

Query: 328  GIVHF 332
            GI++ 
Sbjct: 1269 GILNV 1273



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 214  GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
              L      V+       +V+  C L D +  ++  R+  + +  + ++L GI+T  D+ 
Sbjct: 1310 RMLSPSLQHVLRGRSPPVVVEKTCLLADVVPEMARTRYPALIIDSDTRQLCGILTSKDLL 1369

Query: 274  -RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGI 329
             R   K +     + DVM  NP     +  L  A  ++ + N   L VVD D +  +G+
Sbjct: 1370 HRVVAKRVGMHTMIGDVMTHNPDSGSPEMTLLSAFHVMHEGNFLHLPVVDPDTKMIVGV 1428



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 48/128 (37%), Gaps = 6/128 (4%)

Query: 210  GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK--LKGII 267
             G         +           V     + +A  ++ +KR   V VV       ++GI+
Sbjct: 1480 SGATSKSHRTRTVSSLRPSIAVTVSEDATVAEAAQLMKQKRTDVVLVVASVSSKLMRGIL 1539

Query: 268  TEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            T+ DI  R   K L+     V  VM +N K +        AM  + Q +   L VVD+  
Sbjct: 1540 TDTDICWRVLAKHLDPYRTLVASVMTENIKFVAPQDDALDAMLAMHQGHFRHLPVVDN-G 1598

Query: 325  KAIGIVHF 332
               G+++ 
Sbjct: 1599 AITGVLNI 1606



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 4/76 (5%)

Query: 259  EGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
             G++L G++T  D + R    +L+  T  V DVM   P  +     L  A+ L+ +H+  
Sbjct: 2412 AGKRLIGLLTANDILMRVIASNLDPSTTLVADVMTSTPDTVPPSMSLVDALHLMHEHHTL 2471

Query: 316  VLMVVDDC-QKAIGIV 330
             L VV+D     +G++
Sbjct: 2472 HLPVVEDGSGIILGLI 2487



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/143 (16%), Positives = 56/143 (39%), Gaps = 14/143 (9%)

Query: 201  ENDFYVLHPGGKLGTLF----------VCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
             +DF   H G                    + ++      P+V     + +A  ++++ R
Sbjct: 2709 ASDFAKDHSGSASLHRMLAPMMEKLVSPTIAMILKEEGDPPVVSPHAKVTEAAVLMTKHR 2768

Query: 251  FGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQ 307
                 V+D  + + G++T  D + +   K L  +   VE +M  +P+ +L +  +   ++
Sbjct: 2769 -KAAIVLDHSKSVIGMVTPKDLLRKVVAKGLCADDTLVETIMTVDPEYLLPNAKVLDGLR 2827

Query: 308  LLRQHNISVLMVVDDCQKAIGIV 330
             +       + V+ +  +  G+V
Sbjct: 2828 GMYDAGQLFMPVITESGQLHGMV 2850



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 46/180 (25%)

Query: 199  FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
             ++ D      G  L     C + VM    +   V+     I+AIT + E RF  + VV 
Sbjct: 2619 LTDTDITRRVLGKHLDPDTCCVATVM--TVNPCCVQADESAIEAITKMLEGRFKHLPVVG 2676

Query: 259  EGQKLKGIITEGDIFRNFHKDL---------NTLSVED-----------------VMIK- 291
            +   + GI+   DI +  +  +            +  D                 +M K 
Sbjct: 2677 KNGSISGIL---DISKCLYDAIVCMEKVQQSTEAAASDFAKDHSGSASLHRMLAPMMEKL 2733

Query: 292  -------------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                         +P V+     +T A  L+ +H     +V+D  +  IG+V   DLLR 
Sbjct: 2734 VSPTIAMILKEEGDPPVVSPHAKVTEAAVLMTKHR-KAAIVLDHSKSVIGMVTPKDLLRK 2792



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 46/108 (42%), Gaps = 8/108 (7%)

Query: 230  IPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK---DLNTLS 284
             P + +G  +  A+  ++  R     VVD  +  +L G+ T  ++         D  T  
Sbjct: 1666 SPRIPMGTSVQIALECMATAR-KAALVVDPADHDRLCGLFTPNELLLGVIGNRLDPKTTR 1724

Query: 285  VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIV 330
            +E VM+ +P+V    T +  A++++       L V+  +      G+V
Sbjct: 1725 IESVMLTDPEVATASTTVLEALRIMHDSQCLNLPVICDNSHDTIAGLV 1772



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 45/131 (34%), Gaps = 6/131 (4%)

Query: 205  YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                       L      V+      P V     + +    ++  R     VV+   +  
Sbjct: 1972 RAFRGSFLGQILSSKLRSVLQEDTPAPRVDPFTSVYEVSKRMTASR-KAAMVVNSMGEFM 2030

Query: 265  GIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T   +  N     + + T  V +VM +N   +  +TL+  AM  + Q     L V++
Sbjct: 2031 GIFTPKSLLENVLSRGRPMYTTPVYEVMEQNAPPLYSETLIMDAMCTIHQAKAFYLPVLE 2090

Query: 322  DCQK--AIGIV 330
                   +GIV
Sbjct: 2091 SEVIPLPVGIV 2101



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 22/47 (46%)

Query: 291  KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++   I E+  +T A + +R   +  ++V  D     GI+   D+ R
Sbjct: 2580 RSVLHIDENDSVTEAARQMRHGRVDAVVVTTDDGDLRGILTDTDITR 2626


>gi|313683571|ref|YP_004061309.1| diguanylate cyclase/phosphodiesterase with pas/pac sensor(s)
           [Sulfuricurvum kujiense DSM 16994]
 gi|313156431|gb|ADR35109.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Sulfuricurvum kujiense DSM 16994]
          Length = 974

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + DA+  +++     V VVD   +  GI TE D        +N   S+ +VM   P
Sbjct: 19  ADQSIADALETMTKAGISSVIVVDSDNRPIGIFTEHDALGVVADFINIEQSLREVMTPEP 78

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + E   L  A  ++ +     L+VVD+ ++ +G+V   D LR
Sbjct: 79  FCVEETFYLHDAYAMMEEKGYRHLVVVDEEERFVGVVSEGDFLR 122



 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 6/141 (4%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE DF  L   G              SG  + +V    PL +A  ++ E R    AVV  
Sbjct: 116 SEGDF--LRHIGFEQLGKFKVVAEAMSGSLL-IVSPDTPLFEAAALMHE-RKSEYAVVLN 171

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           G    G+ITE DI R     K    ++VE ++ +N  +I +   L  A  L+ +H +  L
Sbjct: 172 GSHPSGLITERDIARVHAQKKGDKDVTVEALLHRNFHLIEKSIPLQEAASLMEEHGVHQL 231

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
           +VVD+    +G++   D+L  
Sbjct: 232 IVVDETGNLVGLLSRHDVLHA 252



 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTL 283
                  V+    L DA  ++ EK +  + VVDE ++  G+++EGD  R+  F +     
Sbjct: 74  MTPEPFCVEETFYLHDAYAMMEEKGYRHLVVVDEEERFVGVVSEGDFLRHIGFEQLGKFK 133

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V + M  +  ++  DT L  A  L+ +      +V++      G++   D+ R
Sbjct: 134 VVAEAMSGSLLIVSPDTPLFEAAALMHERKSEYAVVLNGS-HPSGLITERDIAR 186



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 2/62 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  ++++ ++  +   +  D  +  A++ + +  IS ++VVD   + IGI    D L  G
Sbjct: 1   MKQVTLKSIISNDGLALDADQSIADALETMTKAGISSVIVVDSDNRPIGIFTEHDAL--G 58

Query: 340 II 341
           ++
Sbjct: 59  VV 60



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D   +H   K G   V    ++H   +  L++   PL +A +++ E     + VVD
Sbjct: 179 ITERDIARVH-AQKKGDKDVTVEALLH--RNFHLIEKSIPLQEAASLMEEHGVHQLIVVD 235

Query: 259 EGQKLKGIITEGDIFRNFH 277
           E   L G+++  D+    H
Sbjct: 236 ETGNLVGLLSRHDVLHAVH 254


>gi|292489083|ref|YP_003531970.1| bifunctional protein glk [Erwinia amylovora CFBP1430]
 gi|292900208|ref|YP_003539577.1| RpiR family transcriptional regulator [Erwinia amylovora ATCC
           49946]
 gi|291200056|emb|CBJ47181.1| RpiR-family transcriptional regulator [Erwinia amylovora ATCC
           49946]
 gi|291554517|emb|CBA22080.1| Bifunctional protein glk [Erwinia amylovora CFBP1430]
 gi|312173239|emb|CBX81494.1| Bifunctional protein glk [Erwinia amylovora ATCC BAA-2158]
          Length = 279

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 80/188 (42%), Gaps = 5/188 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K  T   + ++ +  ++     +++EK   S++ ++L           +  +K  + R+V
Sbjct: 77  KDATTVHNHILSDDALKVVGEKLLSEKT--SAIRATLDINSEEMLLATLRLLKQAR-RIV 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + GIG SG +    +  L   G  +       A    +  ++  D+++ +S++G   E+ 
Sbjct: 134 LIGIGASGLVAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERREIN 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
                ARR    ++A T    + +   A+  L    E +S     A  +S   QL + D 
Sbjct: 194 LAAQEARRIGATVLAFTGFTPNTLQQSANHCLYTVAEEQSTR--SAALSSTTAQLTLTDL 251

Query: 189 LAIALLES 196
           L +AL++ 
Sbjct: 252 LFMALIQH 259


>gi|330834038|ref|YP_004408766.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329566177|gb|AEB94282.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 300

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L +A  IL         V+D+   + GIIT  D+ R F+       V D M ++ 
Sbjct: 186 KPNMTLKEAAGILYSAGIRGAPVLDDNSNVTGIITTADLMRAFYDGNLNALVSDYMKRDV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I ED  +  A++ +  +N+  L+V+D   +  G+V   D+L+   G+
Sbjct: 246 ITIKEDDDIMEAVKKMVTYNVGRLLVMDAINRVTGMVTRTDILKSIAGL 294


>gi|260891957|ref|YP_003238054.1| CBS domain containing protein [Ammonifex degensii KC4]
 gi|260864098|gb|ACX51204.1| CBS domain containing protein [Ammonifex degensii KC4]
          Length = 210

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 57/126 (45%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +    P+  A+ I+++ +   + VV +  KL GI+TE  + R          
Sbjct: 6   CMTANPITITKDTPIFQALEIINKHKIRHLPVV-QDGKLIGIVTERGLLRISPSPASTLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L  L+V + M+KNP     DT +  A  ++R+H I  L V++   + +GI+  
Sbjct: 65  VYELNYILAKLTVAEAMVKNPITTTPDTPIEEAALVMREHKIGCLPVLEK-GQLVGIITQ 123

Query: 333 LDLLRF 338
            D++  
Sbjct: 124 TDMVEA 129



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/54 (40%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M  NP  I +DT +  A++++ +H I  L VV    K IGIV    LLR 
Sbjct: 3   VRDCMTANPITITKDTPIFQALEIINKHKIRHLPVV-QDGKLIGIVTERGLLRI 55



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              P+ +A  ++ E + GC+ V+ E  +L GIIT+ D+     +  N     
Sbjct: 90  PDTPIEEAALVMREHKIGCLPVL-EKGQLVGIITQTDMVEALVRLFNLRKAG 140


>gi|164656969|ref|XP_001729611.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
 gi|159103504|gb|EDP42397.1| hypothetical protein MGL_3155 [Malassezia globosa CBS 7966]
          Length = 681

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 3/103 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     + DA  + + KR  CV VVD+ + L GI T  D+         D     V  +M
Sbjct: 69  VPQTMSITDASQLCAAKRTDCVLVVDDEEHLAGIFTAKDLAYRIVAGGIDPRMTPVSSIM 128

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +P V  + T  T A+  +       L V ++    +G++  
Sbjct: 129 TVSPMVTRDTTSATEALSTMVTRGFRHLPVCNEDGDVVGLLDI 171



 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 17/139 (12%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-----------GQK 262
                  + ++ S      V +   + DA  ++ + R   V V++              K
Sbjct: 221 RMSMPELASILDSRTMPCTVGVRTTVRDAARLMKQHRTTAVCVMENASGAQGERGIATGK 280

Query: 263 LKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + GI T  D+  R     L+    SV  VM  +P        +  A++ +       L V
Sbjct: 281 IAGIFTSKDVVLRVIAAGLDPERCSVVRVMTPHPDTASPSLSIQEALRKMHDGRYLNLPV 340

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VD   + +G+V   D+L+ 
Sbjct: 341 VDVDARLVGVV---DVLKL 356



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 28/194 (14%), Positives = 60/194 (30%), Gaps = 61/194 (31%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+  D       G +       S +M       + +      +A++ +  + F  + V +
Sbjct: 103 FTAKDLAYRIVAGGIDPRMTPVSSIMTVSPM--VTRDTTSATEALSTMVTRGFRHLPVCN 160

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL----------------------------------S 284
           E   + G++   DI + F++ L  L                                  S
Sbjct: 161 EDGDVVGLL---DIAKVFYEALEKLERAHGSSQKLYHALEGVQNEWGGGPQQAMMQYVQS 217

Query: 285 VEDVMI-----------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---------- 323
           + + M              P  +   T +  A +L++QH  + + V+++           
Sbjct: 218 LRERMSMPELASILDSRTMPCTVGVRTTVRDAARLMKQHRTTAVCVMENASGAQGERGIA 277

Query: 324 -QKAIGIVHFLDLL 336
             K  GI    D++
Sbjct: 278 TGKIAGIFTSKDVV 291


>gi|307594758|ref|YP_003901075.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307549959|gb|ADN50024.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 297

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 61/122 (50%), Gaps = 1/122 (0%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                       ++  ++   PL +A  + +E++   + V+D+  ++ G+IT  +I + +
Sbjct: 172 IPKVKVEALMSKNVITIRHDSPLKEAAKVFAERKIRALPVIDDEGRIVGLITTSEIAKAY 231

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++    + VED   ++   I ++  +  AM+L+  + I  L+VV    K +GI+   D+L
Sbjct: 232 YEGNLNVRVEDYARRDVPTIDKEADIYDAMRLMTVNKIGRLIVV-SGGKPVGIITRTDIL 290

Query: 337 RF 338
           ++
Sbjct: 291 QY 292



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 40/94 (42%), Gaps = 14/94 (14%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +++EK  G   +V    KL  I                + VE +M KN   I  D+ L  
Sbjct: 151 VITEKNEGLRELVVAINKLIAI--------------PKVKVEALMSKNVITIRHDSPLKE 196

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A ++  +  I  L V+DD  + +G++   ++ + 
Sbjct: 197 AAKVFAERKIRALPVIDDEGRIVGLITTSEIAKA 230



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 1/68 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
                   +      ++   +P +     + DA+ +++  + G + VV  G K  GIIT 
Sbjct: 228 AKAYYEGNLNVRVEDYARRDVPTIDKEADIYDAMRLMTVNKIGRLIVV-SGGKPVGIITR 286

Query: 270 GDIFRNFH 277
            DI +   
Sbjct: 287 TDILQYLA 294


>gi|296082380|emb|CBI21385.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 35/155 (22%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M   + + +VK    + +A+ IL E R     V+D+  KL G++++ D+  
Sbjct: 9   NGVYTVGDFMTRKEDLHVVKATTTVEEALEILVENRITGFPVIDDDWKLVGLVSDYDLLA 68

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   V D+M   P V+ E T L  A
Sbjct: 69  LDSISGGGLTDTIMFPEVDSTWKTFNELQKLLSKTNGKVVGDLMTPAPVVVRETTNLEDA 128

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 129 ARLLLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 163


>gi|239990116|ref|ZP_04710780.1| putative inosine-5'-monophosphate dehydrogenase [Streptomyces
           roseosporus NRRL 11379]
          Length = 484

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 43/174 (24%), Positives = 65/174 (37%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 33  NIPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 84

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V
Sbjct: 85  MVTDPITVHPDATLGEADALCAKFRISGVPVTDAAGKLLGIVTNRDM--AFESD-RSRQV 141

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V  +       AM+LLR+H I  L +VD+     G++   D  + 
Sbjct: 142 REVMTPMPLVTGKVGISGVEAMELLRRHKIEKLPLVDEAGLLKGLITVKDFKKA 195


>gi|238750380|ref|ZP_04611881.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           rohdei ATCC 43380]
 gi|238711311|gb|EEQ03528.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           rohdei ATCC 43380]
          Length = 280

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 86/188 (45%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK  +++L ++L      +   A+E ++  + RV++TG+G S
Sbjct: 85  NQILSTDSLKTVGEKLLSEK--VAALRATLDINSEQRLAQALEMLRGAQ-RVILTGLGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +       A    +  +   DL++V+S+ G   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVMAVSETDMHAQLAAVQALDARDLLLVISFCGERREINLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS   + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RCGAKVLALTSFTPNSLQQRADHCLYT--ISEEPIIRNAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 SRNFSEND 203
               S  D
Sbjct: 260 QNLESAQD 267


>gi|239993166|ref|ZP_04713690.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Alteromonas macleodii
           ATCC 27126]
          Length = 609

 Score = 90.3 bits (223), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V +   +  A  I++ ++   + V  E  KL GIIT+ D+  R     L+  L V  +M 
Sbjct: 159 VDVETSITVAAQIMTNQKVSSLLVTRED-KLIGIITDRDLRSRVVAASLDIHLPVSHIMT 217

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLLR 337
            NP  I+ +  L  A+ L+ + NI  L V+D      +G+V   D++R
Sbjct: 218 PNPAQIMGNRTLFDALALMTERNIHHLPVIDQQTLVPLGMVTASDIIR 265



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 2/56 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           EDV+ K+P  +  +T +TVA Q++    +S L+V  +  K IGI+   DL R  ++
Sbjct: 149 EDVINKSPVSVDVETSITVAAQIMTNQKVSSLLVTRED-KLIGIITDRDL-RSRVV 202



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFRN 275
              +   +     L DA+ +++E+    + V+D+   +  G++T  DI R+
Sbjct: 216 MTPNPAQIMGNRTLFDALALMTERNIHHLPVIDQQTLVPLGMVTASDIIRH 266


>gi|256830264|ref|YP_003158992.1| inosine-5'-monophosphate dehydrogenase [Desulfomicrobium baculatum
           DSM 4028]
 gi|256579440|gb|ACU90576.1| inosine-5'-monophosphate dehydrogenase [Desulfomicrobium baculatum
           DSM 4028]
          Length = 485

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI+L  +         ++H    +    +    V  S   + +
Sbjct: 41  NIPFLSAAMDTVTESRMAISLARAGGIG-----IVHKNMTVEQQALEVVKVKKSESGMIV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +  A+ ++ + R   + VV  G  L GI+T  D+   F  D+    V +V
Sbjct: 96  DPITVAPDDTVGHALELMRDYRISGLPVV-LGDHLVGIVTNRDVR--FVTDM-AAKVSEV 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  K    +     L  A + L  + I  L+VVDD  K  G++   D+
Sbjct: 152 MTSKKLITVPVGISLEDAKRHLHDNRIEKLLVVDDSNKLKGLLTIKDI 199


>gi|257468646|ref|ZP_05632740.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
 gi|317062903|ref|ZP_07927388.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
 gi|313688579|gb|EFS25414.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium ulcerans ATCC
           49185]
          Length = 484

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++ +  ++
Sbjct: 42  NVPVLSAAMDTVTESDLAIALARQGGIGFIHKNMSIADQAAEVDRVKRIESGMIRNPVTL 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              K  C +  A  ++   +   + V+++  +L GI+T  DI   +HKD+  L V ++M 
Sbjct: 102 ---KEDCTVGFAEDLMRRYKISGLPVIEDDGRLIGIVTNRDIK--YHKDMEQL-VGEIMT 155

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A ++L  + I  L + D+     G++   D+
Sbjct: 156 KENLITASVGTTLEQAKEVLLSNRIEKLPITDEAGYLKGLITIKDI 201


>gi|83945240|ref|ZP_00957589.1| inosine-5'-monophosphate dehydrogenase [Oceanicaulis alexandrii
           HTCC2633]
 gi|83851410|gb|EAP89266.1| inosine-5'-monophosphate dehydrogenase [Oceanicaulis alexandrii
           HTCC2633]
          Length = 490

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 11/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +         +      +                  P+
Sbjct: 39  NIPILSAAMDTVTEAGLAIAMAQDGGLG--VIHRNLTNEEQAEEVRRVKRYESGMVVNPI 96

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE----GQKLKGIITEGDIFRNFHKDLNTLSVED 287
            +     L +   +++  +   + VV+       KL GIIT  D+      D     V  
Sbjct: 97  TISPKATLAELQALMNHHKISGIPVVEGGEGVNGKLVGIITNRDVRFA---DDMNQPVSS 153

Query: 288 VMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M       +        A +LL +H I  L+VVDD    +G++   D+++ 
Sbjct: 154 LMTHEGLVTVKPGVDQGEARRLLHKHRIERLLVVDDEGHCVGLMTVKDMVKA 205


>gi|293392142|ref|ZP_06636476.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D7S-1]
 gi|290952676|gb|EFE02795.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D7S-1]
          Length = 488

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 13/203 (6%)

Query: 143 AITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
           A+T ++  ++  H+ +      L  +  S      P  SA M       LAI+L +    
Sbjct: 9   ALTFDDVLLLPAHSTVLPNTANLSTQLTSTIRLNIPMLSAAMDTVTEAKLAISLAQEGGI 68

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +  +     ++  +    S V+        V     + +   I  +  F    VV
Sbjct: 69  GFIHKNMTIERQVDRVRKVKKFESGVV---SDPITVPPNLTISELKAIAQKNGFAGYPVV 125

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
           D    L GIIT  DI   F  ++N  +V D M        + ED       QL+ +H + 
Sbjct: 126 DADNNLVGIITGRDIR--FVSNVNK-TVADFMTPKDRLVTVKEDAQREEIFQLMHKHRVE 182

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            ++VVDD  K  G++   D  + 
Sbjct: 183 KVLVVDDNFKLKGMITLKDYQKA 205



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  +    +D M   D +  VK      +   ++ + R   V VVD+  KLKG+IT  D 
Sbjct: 143 VSNVNKTVADFMTPKDRLVTVKEDAQREEIFQLMHKHRVEKVLVVDDNFKLKGMITLKDY 202

Query: 273 FRNFHK 278
            +   K
Sbjct: 203 QKAEQK 208


>gi|254490976|ref|ZP_05104158.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxidans DMS010]
 gi|224463885|gb|EEF80152.1| hypothetical protein MDMS009_1309 [Methylophaga thiooxydans DMS010]
          Length = 149

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
                L  A+ ++ E R G + V D    L GI++E D+    H+     + ++V D M 
Sbjct: 18  SPSDSLDKAVNLMMEHRIGSLVVTDYDGHLVGILSERDLLNILHQKHAMWSPVTVADAMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P V   D  L   M ++  +NI  L VV    K  G++   D++  
Sbjct: 78  PEPYVCEPDNTLEEVMNIMVDNNIRHLPVVYKA-KLEGMLSITDIVEE 124


>gi|158425957|ref|YP_001527249.1| inosine-5'-monophosphate dehydrogenase [Azorhizobium caulinodans
           ORS 571]
 gi|158332846|dbj|BAF90331.1| Inosine-5'-monophosphate dehydrogenase [Azorhizobium caulinodans
           ORS 571]
          Length = 502

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 47/220 (21%), Positives = 79/220 (35%), Gaps = 23/220 (10%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQL 183
            S PL ++        A   D VL +P   E  P G               P  SA M  
Sbjct: 3   MSNPLSSLNGSPFRE-ALTFDDVLLVPGASEVMPGGVNLATRLTNTISLNLPILSAAMDT 61

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
                +AIA+ ++          L P  +   +            +   +     L  A+
Sbjct: 62  VTEARMAIAMAQAGGIGVIH-RNLTPEIQAEHVRQVKKFESGMVVNPVTIHPDETLQYAL 120

Query: 244 TILSEKRFGCVAVVDEG----QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN-PKVILE 298
            ++       + VV+ G     KL GI+T  D+    + D     V ++M K+    + E
Sbjct: 121 DLMKRFGISGIPVVERGNGRGGKLVGILTNRDVRFATNPD---QPVSELMTKDRLITVTE 177

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     A +LL Q+ I  L+VVD     +G++   D+ + 
Sbjct: 178 NVSQAEAKKLLHQYRIEKLLVVDANYHCVGLITVKDIEKA 217


>gi|21223149|ref|NP_628928.1| inosine 5' monophosphate dehydrogenase [Streptomyces coelicolor
           A3(2)]
 gi|256785754|ref|ZP_05524185.1| inosine 5' monophosphate dehydrogenase [Streptomyces lividans TK24]
 gi|289769646|ref|ZP_06529024.1| inosine-5'-monophosphate dehydrogenase [Streptomyces lividans TK24]
 gi|7320889|emb|CAB82009.1| inosine 5' monophosphate dehydrogenase [Streptomyces coelicolor
           A3(2)]
 gi|289699845|gb|EFD67274.1| inosine-5'-monophosphate dehydrogenase [Streptomyces lividans TK24]
          Length = 501

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AI++            VLH    +         V  S      
Sbjct: 49  NIPLLSAAMDKVTESRMAISMARQGGVG-----VLHRNLSIEDQANQVDLVKRSESGMVA 103

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L +A  + ++ R   V V D   KL GI+T  D+   F  D  +  V +V
Sbjct: 104 NPITIHPDATLGEADALCAKFRISGVPVTDGAGKLLGIVTNRDM--AFETD-RSRQVREV 160

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   P V  +       AM+LLR+H I  L +VD      G++   D ++ 
Sbjct: 161 MTPMPLVTGQVGISGVDAMELLRRHKIEKLPLVDGDGILKGLITVKDFVKA 211


>gi|168333407|ref|ZP_02691687.1| inosine-5'-monophosphate dehydrogenase [Epulopiscium sp. 'N.t.
           morphotype B']
          Length = 486

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIAL            ++H    +         V  S + +  
Sbjct: 43  NVPFLSAGMDTVTESTMAIALARQGGIG-----IIHKNMSIRAQQEEVDKVKRSENGVIK 97

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A  ++++ R   V +  E  KL GI+T  D+   F  +     + +V
Sbjct: 98  NPFSLSKDHYVYEANALMAKFRISGVPIT-EDGKLVGILTNRDLR--FETN-YEKKISEV 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  K+     E T L  A ++L +H I  L +VD+     G++   D+
Sbjct: 154 MTSKDLVTAREGTTLEQAKEILSRHRIEKLPIVDEKNNLKGLITIKDI 201



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 28/63 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T +      + +   +   + G  L  A  ILS  R   + +VDE   LKG+IT  DI 
Sbjct: 143 ETNYEKKISEVMTSKDLVTAREGTTLEQAKEILSRHRIEKLPIVDEKNNLKGLITIKDIE 202

Query: 274 RNF 276
           +N 
Sbjct: 203 KNI 205


>gi|150403325|ref|YP_001330619.1| signal transduction protein [Methanococcus maripaludis C7]
 gi|150034355|gb|ABR66468.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 137

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 7/113 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     +I++   L + +  C+ VV++  +  GI+T  DI  N   D  TL  ++ DVM 
Sbjct: 20  VAPESGVIESFEALLKNKISCLPVVNQNNETIGIVTTTDIGYNLIVDKYTLETTIADVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   I +D     A++ +  H      I+ L VV+   K +GI+   D+LR 
Sbjct: 80  KNVVTIGQDESAVDALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDILRA 132



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 31/59 (52%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K +  + ++D+M  +   +  ++ +  + + L ++ IS L VV+   + IGIV   D+
Sbjct: 1   MKKIKEIVIKDIMSSDVVSVAPESGVIESFEALLKNKISCLPVVNQNNETIGIVTTTDI 59



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHK 278
              ++  +      +DA+  +     G      + VV+   KL GI+++GDI R   K
Sbjct: 78  MTKNVVTIGQDESAVDALKKMDLHGDGREIINQLPVVNSENKLVGILSDGDILRAISK 135


>gi|51244754|ref|YP_064638.1| inosine-5'-monophosphate dehydrogenase [Desulfotalea psychrophila
           LSv54]
 gi|50875791|emb|CAG35631.1| probable inosine-5'-monophosphate dehydrogenase [Desulfotalea
           psychrophila LSv54]
          Length = 489

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 64/178 (35%), Gaps = 14/178 (7%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
                   P  S+ M        AIA+            ++H    L    +    V  S
Sbjct: 36  TDTILLNTPLVSSAMDTVTEHRAAIAMAREGGIG-----IIHKNMTLDQQVLEVEKVKKS 90

Query: 227 GDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              + +    V +   + +   I+S  +   + V+ +  KL GI+T  D+      DL  
Sbjct: 91  ESGMIIDPVTVDLHQSVGEVQKIMSSYKISGLPVL-KDGKLVGIVTNRDLRFVSDNDLR- 148

Query: 283 LSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V +VM  KN         L  +  LL +H I  L+VVDD     G++   DL +  
Sbjct: 149 --VSEVMTSKNLVTAQVGITLEQSKALLHEHRIEKLLVVDDDGALNGLITIKDLEKIK 204


>gi|253681591|ref|ZP_04862388.1| CBS domain protein [Clostridium botulinum D str. 1873]
 gi|253561303|gb|EES90755.1| CBS domain protein [Clostridium botulinum D str. 1873]
          Length = 142

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
              ++  +     +  A  ++SE   G + V   G+++ GI+T+ DI        K+++ 
Sbjct: 7   MTKTVATINPEDTVERAAQMMSEYNVGSIPVC-RGEEVVGIVTDRDITLRSSAQGKNVHQ 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V+D+M  NP V      +    +L+ +  I  L VV +  K +GIV   DL
Sbjct: 66  QKVKDIMSSNPVVTSPSMDVNEVARLMGERQIRRLPVV-ENNKVVGIVALGDL 117



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M K    I  +  +  A Q++ ++N+  + V    ++ +GIV   D+ 
Sbjct: 3   VKNIMTKTVATINPEDTVERAAQMMSEYNVGSIPVC-RGEEVVGIVTDRDIT 53


>gi|73663632|ref|YP_302413.1| IMP dehydrogenase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|123641581|sp|Q49UU8|IMDH_STAS1 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|72496147|dbj|BAE19468.1| IMP dehydrogenase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 488

 Score = 90.0 bits (222), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 16/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AI++            V+H    +      
Sbjct: 30  VDLSVQLSEGIKLNIPVISAGMDTVTESKMAISMARQGGLG-----VIHKNMNIEDQADE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + +            + +A  ++ + R   V +V+  E ++  GIIT  D+ 
Sbjct: 85  VQKVKRSENGVISNPFFLTPEESVFEAEALMGKYRISGVPIVNNKEDRQFVGIITNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F +D  ++ + DVM K   V     T L  A +LL+QH I  L +V    +  G++  
Sbjct: 145 --FIEDF-SIKISDVMTKEQLVTAPVGTTLDEAEKLLQQHKIEKLPLV-KEGRLEGLITI 200

Query: 333 LDL 335
            D+
Sbjct: 201 KDI 203


>gi|218678132|ref|ZP_03526029.1| signal-transduction protein [Rhizobium etli CIAT 894]
          Length = 201

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 24/127 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------FHKDLN--- 281
                +  A  ++++++   V VVD+  +L G+I+EGD+ R             D+    
Sbjct: 15  SPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIRRTELSSGAFVLKADMELGP 74

Query: 282 -----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                         V DVM  +P  I ED  L+   +L+++  I  + V+    K +GIV
Sbjct: 75  DERANAFVKRCAWRVGDVMTPDPLTIDEDAALSHVAELMQERGIKRIPVL-RDGKLVGIV 133

Query: 331 HFLDLLR 337
              DLL+
Sbjct: 134 SRADLLQ 140



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM      +  D  +  A +L+    +S + VVDD  + +G++   DL+R
Sbjct: 3   VKDVMTTTVVTLSPDNSVRHAAKLMADQQVSGVPVVDDDGRLLGVISEGDLIR 55


>gi|258515317|ref|YP_003191539.1| Polynucleotide adenylyltransferase region [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779022|gb|ACV62916.1| Polynucleotide adenylyltransferase region [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 877

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 46/112 (41%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + +   ++       + VV     + G+I++ D+ +  H  L    V
Sbjct: 314 MSSPVKTVPPEMTITEVNALMLRYGHTGMPVVQGDN-MVGVISKRDVEKAVHHGLGHAPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +N   +  +  ++   +++ +++I  L V       +GIV   D+LR
Sbjct: 373 KGYMTRNVLTVDPEMSVSEVQKIMIENDIGRLPVT-RDGMPVGIVSRTDILR 423



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 23/72 (31%), Gaps = 1/72 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A    +   ++  V     + +   I+ E   G + V        GI++  
Sbjct: 361 KAVHHGLGHAPVKGYMTRNVLTVDPEMSVSEVQKIMIENDIGRLPVT-RDGMPVGIVSRT 419

Query: 271 DIFRNFHKDLNT 282
           DI R  H+    
Sbjct: 420 DILRTMHEGFQA 431


>gi|261867630|ref|YP_003255552.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D11S-1]
 gi|261412962|gb|ACX82333.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter
           actinomycetemcomitans D11S-1]
          Length = 488

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/203 (22%), Positives = 77/203 (37%), Gaps = 13/203 (6%)

Query: 143 AITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
           A+T ++  ++  H+ +      L  +  S      P  SA M       LAI+L +    
Sbjct: 9   ALTFDDVLLLPAHSTVLPNTANLSTQLTSTIRLNIPMLSAAMDTVTEAKLAISLAQEGGI 68

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +  +     ++  +    S V+        V     + +   I  +  F    VV
Sbjct: 69  GFIHKNMTIERQVDRVRKVKKFESGVV---SDPITVPPNLTISELKAIAQKNGFAGYPVV 125

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
           D    L GIIT  DI   F  ++N  +V D M        + ED       QL+ +H + 
Sbjct: 126 DADNNLVGIITGRDIR--FVSNVNK-TVADFMTPKDRLVTVKEDAQREEIFQLMHKHRVE 182

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            ++VVDD  K  G++   D  + 
Sbjct: 183 KVLVVDDNFKLKGMITLKDYQKA 205



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  +    +D M   D +  VK      +   ++ + R   V VVD+  KLKG+IT  D 
Sbjct: 143 VSNVNKTVADFMTPKDRLVTVKEDAQREEIFQLMHKHRVEKVLVVDDNFKLKGMITLKDY 202

Query: 273 FRNFHK 278
            +   K
Sbjct: 203 QKAEQK 208


>gi|172056053|ref|YP_001812513.1| inosine-5'-monophosphate dehydrogenase [Exiguobacterium sibiricum
           255-15]
 gi|171988574|gb|ACB59496.1| inosine-5'-monophosphate dehydrogenase [Exiguobacterium sibiricum
           255-15]
          Length = 488

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVTLCEGITLNIPLISAGMDTVTEAPMAIAMARQGGLG-----VIHKNMSMEDQAEH 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIF 273
              V  S + +            + DA  ++S+ R   V +V+    +KL GI+T  D+ 
Sbjct: 85  VDRVKRSENGVITNPFYLTPERQVYDAEYLMSKYRISGVPIVNNETERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F KD +T+ +E VM           T L  A Q+L +H I  L +VD+     G++  
Sbjct: 145 --FVKDYSTV-IETVMTTEELVTAKVGTSLEEAEQILHKHRIEKLPLVDENGVLKGLITT 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204


>gi|304309718|ref|YP_003809316.1| CBS domain protein [gamma proteobacterium HdN1]
 gi|301795451|emb|CBL43649.1| CBS domain protein [gamma proteobacterium HdN1]
          Length = 146

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 217 FVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                D++ S  S  +  V+    ++DAI ++SEK  G + V  E  K+ G+I+E D  R
Sbjct: 1   MKNVRDILRSKPSAYVYSVRPDSKVLDAIKLMSEKGVGALLVT-ENDKVVGVISERDYAR 59

Query: 275 N---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +  +   V ++M  +   +     +   M+L+ +  I  L V+++ +  IG++ 
Sbjct: 60  KVVLMARSSHQAEVREIMTADVISVDPTQSMESCMELMTEKRIRHLPVIENDE-LIGMIS 118

Query: 332 FLDLLR 337
             DL++
Sbjct: 119 IGDLVK 124



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+        +      A         +  V     +   + +++EKR   + V+ 
Sbjct: 52  ISERDYA--RKVVLMARSSHQAEVREIMTADVISVDPTQSMESCMELMTEKRIRHLPVI- 108

Query: 259 EGQKLKGIITEGDIFRNFHKD 279
           E  +L G+I+ GD+ +N   D
Sbjct: 109 ENDELIGMISIGDLVKNIISD 129


>gi|237732547|ref|ZP_04563028.1| conserved hypothetical protein [Citrobacter sp. 30_2]
 gi|226908086|gb|EEH94004.1| conserved hypothetical protein [Citrobacter sp. 30_2]
          Length = 282

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 73/162 (45%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENVAAMHATLDVNSEEKLMESVTMLRSAR-RIIVTGIGASGLVAQNFAWKLLKIGFNAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  ++ +DL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 VERDMHALLATVQALSPNDLLLAISYTGERRELNLAADETLRTGAKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A+  L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RANHCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|219853222|ref|YP_002467654.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
 gi|219547481|gb|ACL17931.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
          Length = 313

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/102 (30%), Positives = 58/102 (56%), Gaps = 1/102 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + DAI ++ EK+ G V ++D+   L+GI+TE D+ R F  + + L+VE++M    +VI
Sbjct: 134 ASIQDAINLIVEKKIGGVPILDDQGVLQGIVTERDLMRLFETERSMLTVEEIMSSPLRVI 193

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D+ ++   + + +H    L VV D     GI+   D++++
Sbjct: 194 GPDSPISAVTREMVKHTFRRLPVVSDE-VLFGIITSTDIVKY 234



 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 15/138 (10%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T     +        + ++    P+      + +  F  + VV   + L GIIT  DI 
Sbjct: 174 ETERSMLTVEEIMSSPLRVIGPDSPISAVTREMVKHTFRRLPVV-SDEVLFGIITSTDIV 232

Query: 274 RNFHKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +                  +  L V D+M  +      +T +T A + +    I  L V+
Sbjct: 233 KYLGTGRVFDQLVTGDVSEVMALPVRDLMSGDLITTTPNTGITQASKEMLDKGIGALPVI 292

Query: 321 DDCQKAIGIVHFLDLLRF 338
           ++  + IG+V   DL++ 
Sbjct: 293 ENS-RLIGLVTEFDLVKA 309



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+  ++   F  + +VD G +K++GI+T  DI                   
Sbjct: 50  VAQTATIINAVETMTTCGFRRLPIVDPGTRKMRGIVTASDIISLMGGGDRYSLVTVKNEG 109

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   SV +VM +    +     +  A+ L+ +  I  + ++DD     GIV   DL
Sbjct: 110 NLIAALNESVREVMSQQFISLTPMASIQDAINLIVEKKIGGVPILDDQGVLQGIVTERDL 169

Query: 336 LRF 338
           +R 
Sbjct: 170 MRL 172



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               +  A   + +K  G + V+ E  +L G++TE D+ + F 
Sbjct: 270 PNTGITQASKEMLDKGIGALPVI-ENSRLIGLVTEFDLVKAFA 311


>gi|119871769|ref|YP_929776.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673177|gb|ABL87433.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 140

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 54/115 (46%), Gaps = 2/115 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
            +       V  G  L +A+ I++    G V +VD+ ++  G+++E D+ R      +  
Sbjct: 7   YYIKREPITVPPGTTLKEAVEIMARNNIGLVVIVDQSRRPIGVLSERDVIRALAAGKSLN 66

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE+V    N   + +D  +  A++ +R   I  ++VV++     G++   D++
Sbjct: 67  TPVEEVGTIGNLLTVRKDDDIYTAVKAMRSRGIRHIIVVNEDGTIAGVLSIRDIV 121



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 30/48 (62%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P  +   T L  A++++ ++NI ++++VD  ++ IG++   D++R 
Sbjct: 11  REPITVPPGTTLKEAVEIMARNNIGLVVIVDQSRRPIGVLSERDVIRA 58


>gi|114569726|ref|YP_756406.1| inosine-5'-monophosphate dehydrogenase [Maricaulis maris MCS10]
 gi|114340188|gb|ABI65468.1| inosine-5'-monophosphate dehydrogenase [Maricaulis maris MCS10]
          Length = 489

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 17/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       +AIA+ ++         V+H    +         V         
Sbjct: 39  KIPMLAAAMDTVSESGMAIAMAQAGGL-----AVIHRNLTIAEQAEEVRRVKRYESGMVV 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTL 283
           +   +     L D   ++++ R   + VV+        KL GIIT  D+      D    
Sbjct: 94  NPVTISPDATLADLRALIAQHRISGIPVVEGATPSRPGKLVGIITNRDVRFA---DDPNE 150

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V ++M ++   +        A   L +H I  L+VVDD  + IG++   D+ + 
Sbjct: 151 KVGNLMTRDVVTVKVGASQDEARAKLHKHRIERLLVVDDSDRCIGLITVKDMEKA 205


>gi|332359505|gb|EGJ37324.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sanguinis
           SK1056]
          Length = 507

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 59  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIEQQADEVRKVKRSENGVII 113

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   + VV+  E +KL GI+T  D+   F  D N     
Sbjct: 114 DPFFLTPEHTIAEADELMGRYRISGIPVVETLENRKLVGILTNRDLR--FISDYNQPISR 171

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +N       T L  A ++L++H I  L +VDD     G++   D+
Sbjct: 172 HMTSENLVTAPVGTDLGTAERILQEHRIEKLPLVDDKGCLSGLITIKDI 220


>gi|229821535|ref|YP_002883061.1| inosine-5'-monophosphate dehydrogenase [Beutenbergia cavernae DSM
           12333]
 gi|229567448|gb|ACQ81299.1| inosine-5'-monophosphate dehydrogenase [Beutenbergia cavernae DSM
           12333]
          Length = 505

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            VLH    +         V  +      
Sbjct: 49  RVPLVSAAMDTVTESRMAIAMARQGGIG-----VLHRNLSIEDQAYQVDLVKRTQTGIIS 103

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L +  T+  E R     V+D   +L GI+T  D+      +     V +V
Sbjct: 104 NPVTIGPDATLEELDTLAGEYRISGFPVLDAEGRLIGIVTNRDLRFTPVAEWAGTKVSEV 163

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P            A  LLR+H +  L +VDD  +  G++   D ++
Sbjct: 164 MTPAPLITGPAGITREEATGLLRKHKLERLPLVDDGGRLAGLITVKDFVK 213


>gi|87199769|ref|YP_497026.1| inosine-5'-monophosphate dehydrogenase [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135450|gb|ABD26192.1| inosine-5'-monophosphate dehydrogenase [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 500

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 64/171 (37%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 54  NIPILSSAMDTVTEADMAIVMAQLGGIG-----VLHRNLSIEEQCAAVRAVKRFESGMVV 108

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    PL +A  ++ + +   + VV+   KL GI+T  D+      D     V ++
Sbjct: 109 NPITISPDAPLGEAQALMRQHKISGIPVVEASGKLVGILTNRDVRFA---DNPQQPVREL 165

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +   +    A +LL Q  I  L+VVDD    IG++   D+ + 
Sbjct: 166 MTHENLATVKLGSSGDEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKA 216


>gi|329117009|ref|ZP_08245726.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parauberis
           NCFD 2020]
 gi|326907414|gb|EGE54328.1| inosine-5'-monophosphate dehydrogenase [Streptococcus parauberis
           NCFD 2020]
          Length = 493

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIAEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+    +KL GIIT  D+   F  D ++L  E
Sbjct: 100 DPFFLTPNHKVAEAEELMQRYRISGVPVVETMNNRKLVGIITNRDMR--FISDYDSLISE 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 158 HMTSEKLVTAPVGTDLETAERILHEHRIEKLPLVDDNGRLSGLITIKDI 206


>gi|116753619|ref|YP_842737.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665070|gb|ABK14097.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 282

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 10/115 (8%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------KDLNTL 283
           +V+   P+  A  ++ +     + V+D+  KL GI+T+ DI             + ++ +
Sbjct: 13  VVERNEPIQRARNLMFKHDISRLPVMDK-GKLVGIVTKYDISNRLAQAAPEWRRRPIDRI 71

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+ VM +NP  I  D  LT A +L+ ++ I  L V +   + +GI+   DLL++
Sbjct: 72  PVQLVMTENPITIYPDATLTQAAELMMENEIDGLPV-EKDGELVGIITSRDLLKY 125



 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 51/127 (40%), Gaps = 1/127 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     +   ++   +     L  A  ++ E     + V ++  +L GIIT  D+ 
Sbjct: 65  RRPIDRIPVQLVMTENPITIYPDATLTQAAELMMENEIDGLPV-EKDGELVGIITSRDLL 123

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + F +      V D+M +    +     +   ++ +  H +S ++V +D  + +G++   
Sbjct: 124 KYFAQQNLDSKVGDLMAEGMVSVHRHHTIAHVVEQMNLHGVSRVLVYEDNMRPVGVITRS 183

Query: 334 DLLRFGI 340
           +L   GI
Sbjct: 184 NLTFAGI 190



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D M     V+  +  +  A  L+ +H+IS L V+D   K +GIV   D+
Sbjct: 1   MRVKDYMATPVWVVERNEPIQRARNLMFKHDISRLPVMDK-GKLVGIVTKYDI 52



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 14/119 (11%), Positives = 33/119 (27%), Gaps = 28/119 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           V     +   +  ++      V V ++  +  G+IT  ++      D             
Sbjct: 146 VHRHHTIAHVVEQMNLHGVSRVLVYEDNMRPVGVITRSNLTFAGIFDSFDQPKMKSIKMT 205

Query: 285 --------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                                ED+M         D       ++L + +I  + V+++ 
Sbjct: 206 RKESTAGRKQYRYIKQVPLVAEDIMSSPIIAARVDDKAVDDAKVLVEKSICGMPVIEND 264


>gi|319896559|ref|YP_004134752.1| imp dehydrogenase [Haemophilus influenzae F3031]
 gi|317432061|emb|CBY80410.1| IMP dehydrogenase [Haemophilus influenzae F3031]
          Length = 488

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVSPDLSLAKLAELVKKNGFAGYPVVDGENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|227504455|ref|ZP_03934504.1| cyclic nucleotide-binding protein [Corynebacterium striatum ATCC
           6940]
 gi|227199103|gb|EEI79151.1| cyclic nucleotide-binding protein [Corynebacterium striatum ATCC
           6940]
          Length = 617

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 75/250 (30%), Gaps = 40/250 (16%)

Query: 125 DELKAILYYAR----RFSIPLIAITSENKSVVACHADIVLTL----PKEPESCPHGLAPT 176
           +EL A+  +      R    +I +  E  S +       + +        +    GL   
Sbjct: 24  EELDALPAHLSIAYFRRG-DVIVLLGEENSFLHVIRTGAIDVLGEDGVLLDRRDPGLTFG 82

Query: 177 TSAIM--------QLAIGDALAIAL-------LESRNFSENDF--YVLHPGGKLGTLFV- 218
            S +M         +A+ D L   L       L  RN     F                 
Sbjct: 83  YSTLMGQPESRYEMIAVEDCLVFRLPQEAFTQLAERNPDIARFFSAQSRQIRAAARELPD 142

Query: 219 -------CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                         +            +  A  ++SE     + VVD G +L GI+T+ D
Sbjct: 143 ATTGDALRTPIEEITRTDPLQADSTTSISAAAQLMSEHGASSLLVVD-GGELTGIVTDRD 201

Query: 272 IFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +        +D     + ++M   P  +        A+  + +  I  L VV    +  G
Sbjct: 202 LRSRVLALGRDPQEA-IAEIMTCTPVTVNASAPAMEALLHMAERGIHHLPVV-AKGQLRG 259

Query: 329 IVHFLDLLRF 338
           IV   D+ R 
Sbjct: 260 IVTQSDITRL 269



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +   V    P ++A+  ++E+    + VV    +L+GI+T+ DI R    D   L+ +
Sbjct: 224 TPVTVNASAPAMEALLHMAERGIHHLPVV-AKGQLRGIVTQSDITRLLQNDPLYLTAD 280


>gi|188582365|ref|YP_001925810.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium populi
           BJ001]
 gi|179345863|gb|ACB81275.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium populi
           BJ001]
          Length = 496

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++          L P  +   + +          +   
Sbjct: 45  NMPIIASAMDTVTEAPMAIAMAQNGGLGVIH-RNLEPAEQAEQVRLVKKYESGMVLNPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++ + R   + VV+ G      KL GI+T  D+    +       V +
Sbjct: 104 IHPDETLADAFDVMKKNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNTG---QPVAE 160

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 161 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|312136422|ref|YP_004003759.1| inosine-5'-monophosphate dehydrogenase [Methanothermus fervidus DSM
           2088]
 gi|311224141|gb|ADP76997.1| inosine-5'-monophosphate dehydrogenase [Methanothermus fervidus DSM
           2088]
          Length = 494

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL            V+H              V  SGD    
Sbjct: 45  NIPILSSAMDTVTEAEMAIALAREGGLG-----VIHRNMSTKEQVEEIKKVKRSGDITIR 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V    P+ +A  I+  +    + VV +  KL GII+  DI    +       V++V
Sbjct: 100 DVITVDPDAPISEAYEIMKRENISGLPVVVDD-KLVGIISRRDIKPIVNS-KGDKKVKEV 157

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +   + E      A+ +  ++ +  L VV    K +GI+   D+L
Sbjct: 158 MTSDVVTVPESITPEEALNIAYENKVERLPVV-KDGKLVGIITVRDIL 204


>gi|329889245|ref|ZP_08267588.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
           11568]
 gi|328844546|gb|EGF94110.1| inosine-5'-monophosphate dehydrogenase [Brevundimonas diminuta ATCC
           11568]
          Length = 486

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 43/173 (24%), Positives = 69/173 (39%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       LAIA+ ++         VLH    +         V         
Sbjct: 39  NIPLLSSAMDTVTESRLAIAMAQAGG-----MGVLHRNMTIDEQAEEVRAVKRYESGMVV 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   V     L + + I+  K+     VVD +  KL G++T  D+   F  DLN L   D
Sbjct: 94  NPVTVAPDTTLGEVLQIVERKKITGFPVVDPKSGKLVGMLTNRDMR--FETDLN-LKAAD 150

Query: 288 VMIKN-PKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M       + E +    A  +LLR   I  ++VVDD  +A+G++   D+ + 
Sbjct: 151 LMTTGELITLREGSAGREAARELLRTRKIERVIVVDDAYRAVGLITMKDIQKA 203


>gi|319763071|ref|YP_004127008.1| cbs domain containing protein [Alicycliphilus denitrificans BC]
 gi|330825150|ref|YP_004388453.1| putative signal transduction protein with CBS domains
           [Alicycliphilus denitrificans K601]
 gi|317117632|gb|ADV00121.1| CBS domain containing protein [Alicycliphilus denitrificans BC]
 gi|329310522|gb|AEB84937.1| putative signal transduction protein with CBS domains
           [Alicycliphilus denitrificans K601]
          Length = 145

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
                +  V     ++ A+ +++EK  G + V+ EG+++ GI TE D  R      +   
Sbjct: 11  KPDAQVHCVAPSDTVLAALRLMAEKHIGALLVM-EGEQIAGIFTERDYARKVVLLGRASV 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V +VM +  + +         M L+ ++ +  L VVD+  + +G+V   DL++
Sbjct: 70  DTPVREVMTRAVRFVHPSHSAEQCMALMTENRLRHLPVVDE-GRVVGLVSIGDLVK 124



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+        LG   V          ++  V         + +++E R   + VVD
Sbjct: 52  FTERDYA--RKVVLLGRASVDTPVREVMTRAVRFVHPSHSAEQCMALMTENRLRHLPVVD 109

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  ++ G+++ GD+ ++ 
Sbjct: 110 E-GRVVGLVSIGDLVKSV 126


>gi|49473836|ref|YP_031878.1| inositol-5-monophosphate dehydrogenase [Bartonella quintana str.
           Toulouse]
 gi|49239339|emb|CAF25672.1| Inosine-5-prime-monophosphate dehydrogenase [Bartonella quintana
           str. Toulouse]
          Length = 499

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 62/173 (35%), Gaps = 11/173 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          + P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAIAQAGGLGVIH-RNMSPAEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFRNFHKDLNTLSVE 286
           +     L +A  ++       + VV+         +L GI+T  D+            + 
Sbjct: 105 IGPDATLEEAKALMHSYGISGIPVVENASKSGSIGRLVGILTNRDVRFASDP---KQKIY 161

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M   N   + E+  L  A  LL  H I  L+VVD+  + +G+V   D+ + 
Sbjct: 162 ELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVVDEQNRCVGLVTVKDIEKA 214


>gi|238916465|ref|YP_002929982.1| malate dehydrogenase [Eubacterium eligens ATCC 27750]
 gi|238871825|gb|ACR71535.1| malate dehydrogenase [Eubacterium eligens ATCC 27750]
          Length = 486

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 65/181 (35%), Gaps = 13/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            ++H    +      
Sbjct: 28  IDLSTQLTKNIKLNIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSVEAQAEE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +            L +A  ++ + R   V + D+  KL GIIT  D+   
Sbjct: 83  VDKVKRSENGVITDPFFLHPDNTLQEANDLMGKFRISGVPITDDNGKLVGIITNRDLKF- 141

Query: 276 FHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             ++     +++ M  +N       T L  A ++L +     L +VDD  K  G++   D
Sbjct: 142 --EEHFERPIKECMTSENLITAPVGTTLEEAKKILGKARKEKLPIVDDDYKLRGLITIKD 199

Query: 335 L 335
           +
Sbjct: 200 I 200


>gi|256810045|ref|YP_003127414.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
 gi|256793245|gb|ACV23914.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
          Length = 141

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 57/112 (50%), Gaps = 7/112 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
           K    +++A   + + +   + V+DE  K+ GI+T  DI  N  +D  TL  ++ DVM K
Sbjct: 22  KKDEGVVEAFEKMLKHKISSLPVIDEENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTK 81

Query: 292 NPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I ED  +  A++ +  +      I+ L VVD   K +GIV   D++R 
Sbjct: 82  DVITIDEDANILEAIKKMDINGKKDEIINQLPVVDKDNKLVGIVSDGDIIRA 133



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + V+D+M K      +D  +  A + + +H IS L V+D+  K IGIV   D+
Sbjct: 5   LKNIKVKDIMTKKVITAKKDEGVVEAFEKMLKHKISSLPVIDEENKVIGIVTTTDI 60



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
               +  +     +++AI  +            + VVD+  KL GI+++GDI R   K +
Sbjct: 79  MTKDVITIDEDANILEAIKKMDINGKKDEIINQLPVVDKDNKLVGIVSDGDIIRALSKII 138

Query: 281 NTL 283
           N  
Sbjct: 139 NDF 141


>gi|163848958|ref|YP_001637002.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222526911|ref|YP_002571382.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
 gi|163670247|gb|ABY36613.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222450790|gb|ACM55056.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
          Length = 145

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------F 273
             ++   V     ++ A   +  +    + VVD+   L GIIT  DI             
Sbjct: 11  MTENPVTVTPDFSVLAAYERMRARGIRRMPVVDKDGALVGIITRSDIEQAMSHPRSEEER 70

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R     L   +V + M  NP  +  D  +  A  ++ +  +S L V+D+  + IGI+   
Sbjct: 71  RMARFSLAGQTVAEYMTPNPITVAADASIGEAAAMMIRARVSGLPVMDN-GRLIGIITES 129

Query: 334 DLLRF 338
           D+ R 
Sbjct: 130 DIFRL 134



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            T  V + M +NP  +  D  +  A + +R   I  + VVD     +GI+   D+ + 
Sbjct: 3   KTERVAEWMTENPVTVTPDFSVLAAYERMRARGIRRMPVVDKDGALVGIITRSDIEQA 60



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           A+   R+  E         G+    ++          +   V     + +A  ++   R 
Sbjct: 60  AMSHPRSEEERRMARFSLAGQTVAEYMT--------PNPITVAADASIGEAAAMMIRARV 111

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFH 277
             + V+D   +L GIITE DIFR   
Sbjct: 112 SGLPVMD-NGRLIGIITESDIFRLVA 136


>gi|256422836|ref|YP_003123489.1| signal transduction protein with CBS domains [Chitinophaga pinensis
           DSM 2588]
 gi|256037744|gb|ACU61288.1| putative signal transduction protein with CBS domains [Chitinophaga
           pinensis DSM 2588]
          Length = 120

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           + +A+ +L EK  G + VVDE +KL GI TE D  R      +      V D+M  +P  
Sbjct: 1   MYEALEVLEEKNLGALVVVDESEKLIGIFTERDYARKVVLKGRSSKETYVRDIMTDSPVF 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  DT +   MQL+    I  L V+ +  +  GI+   D+++
Sbjct: 61  VSPDTDIEYCMQLMTNKFIRHLPVI-ENNELTGIISIGDIVK 101



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+          +      D+M   DS   V     +   + +++ K    + V+ 
Sbjct: 29  FTERDYARKVVLKGRSSKETYVRDIM--TDSPVFVSPDTDIEYCMQLMTNKFIRHLPVI- 85

Query: 259 EGQKLKGIITEGDIFRNFHKDLN 281
           E  +L GII+ GDI ++   + +
Sbjct: 86  ENNELTGIISIGDIVKHVISNKD 108


>gi|282898394|ref|ZP_06306385.1| Cl- channel, voltage gated [Raphidiopsis brookii D9]
 gi|281196925|gb|EFA71830.1| Cl- channel, voltage gated [Raphidiopsis brookii D9]
          Length = 498

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + +AI   S        VVD   +L GIIT+ DI   +       ++ ++M   P 
Sbjct: 91  AQMSIKEAIQAFSRSHHRGFPVVD-QGQLVGIITQSDIKNIYP--FQYTTLREIMTPGPV 147

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  D  L+  + LL +H IS L VV+  QK +GI+   D++R 
Sbjct: 148 TVQPDQGLSEVLYLLDRHQISRLPVVEK-QKILGIITRGDIIRA 190



 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  L  EDVM K  + +     +  A+Q   + +     VVD   + +GI+   D+
Sbjct: 73  LTKLKAEDVMQKRVETLDAQMSIKEAIQAFSRSHHRGFPVVD-QGQLVGIITQSDI 127



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 40/110 (36%), Gaps = 23/110 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    L + + +L   +   + VV E QK+ GIIT GDI R     +N  ++
Sbjct: 142 MTPGPVTVQPDQGLSEVLYLLDRHQISRLPVV-EKQKILGIITRGDIIRAEADSINCKNI 200

Query: 286 ED----------VMIKNPKVIL------------EDTLLTVAMQLLRQHN 313
                          ++P                 +TLL +A  + ++ +
Sbjct: 201 ASGPQPEPSYLVYQTRSPSTGRGRLLVTLSNPDTAETLLEMAATIAQERH 250


>gi|16125864|ref|NP_420428.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           CB15]
 gi|221234626|ref|YP_002517062.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           NA1000]
 gi|13423018|gb|AAK23596.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           CB15]
 gi|220963798|gb|ACL95154.1| inosine-5'-monophosphate dehydrogenase [Caulobacter crescentus
           NA1000]
          Length = 487

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         VLH             +V      + +
Sbjct: 39  NIPLVSAAMDTVTESRLAIAMAQAGG-----MGVLHRNLSNEEQADQVREVKRYESGMVI 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +   I + ++     VV+ G  KL GI+T  D+   F  D + +    
Sbjct: 94  NPLTIHPDTTLAEIREIKARRKISGFPVVERGSGKLVGILTNRDMR--FEGD-DKVPASQ 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   + E      A +LLR+H I  L+VVD+  +A+G++   D+ + 
Sbjct: 151 LMTRDNLITVSEGVDHREARELLRRHKIERLIVVDEAYRAVGLITVKDIEKA 202


>gi|319406110|emb|CBI79740.1| inosine-5'-monophosphate dehydrogenase [Bartonella sp. AR 15-3]
          Length = 500

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 13/200 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L      +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVDLKTRIAADIELN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A  ++       + VV+ G       
Sbjct: 80  SPAEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKNLMRSHSISGIPVVESGAKSRISG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L GI+T  D+            + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 RLVGILTNRDVRFASDP---KQKIYELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  + +G+V   D+ +  +
Sbjct: 197 DEQGRCVGLVTVKDIEKARL 216


>gi|218883563|ref|YP_002427945.1| putative signal-transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
 gi|218765179|gb|ACL10578.1| putative signal-transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
          Length = 132

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTL 283
                  +K    +  A  ++ E     V VV+    L GI+T  D+       K    +
Sbjct: 9   MSAPPITIKETESVEKAAKLMFENNTSSVIVVNSDGLLTGIVTAKDVVAAVALGKIGQDI 68

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V   M +NP  I  D  +T A++ +R+ N+  L VVD   K +G+V   D++
Sbjct: 69  PVARFMKENPLTISPDAHITEALEKMREFNVRHLPVVDKNNKPVGMVSVRDIM 121



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V D+M   P  I E   +  A +L+ ++N S ++VV+      GIV   D++  
Sbjct: 3   LRVSDIMSAPPITIKETESVEKAAKLMFENNTSSVIVVNSDGLLTGIVTAKDVVAA 58



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            LG +           ++   +     + +A+  + E     + VVD+  K  G+++  D
Sbjct: 60  ALGKIGQDIPVARFMKENPLTISPDAHITEALEKMREFNVRHLPVVDKNNKPVGMVSVRD 119

Query: 272 IF 273
           I 
Sbjct: 120 IM 121


>gi|157144503|ref|YP_001451822.1| putative DNA-binding transcriptional regulator [Citrobacter koseri
           ATCC BAA-895]
 gi|157081708|gb|ABV11386.1| hypothetical protein CKO_00221 [Citrobacter koseri ATCC BAA-895]
          Length = 282

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/162 (24%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  ++++ ++L      +   +V  ++  + RVVITGIG SG +    A  L   G    
Sbjct: 104 EENVAAMHATLDVNSEEKLFESVMMLRNAR-RVVITGIGTSGLVAQNFAWKLMKIGFNVV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
             H   A    +  +  DDL++ +S+SG   EL        R    ++AIT    + +  
Sbjct: 163 AEHDMHALLATVQALAPDDLLLAISYSGERRELNMAADETLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q  + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTHAQTMLTDLLFMALVQQ 262


>gi|187775818|ref|ZP_02798585.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4196]
 gi|189405741|ref|ZP_02823886.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC508]
 gi|208806168|ref|ZP_03248505.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4206]
 gi|208814324|ref|ZP_03255653.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4045]
 gi|209397313|ref|YP_002271978.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4115]
 gi|300817722|ref|ZP_07097937.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 107-1]
 gi|300820822|ref|ZP_07100972.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 119-7]
 gi|300903524|ref|ZP_07121447.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 84-1]
 gi|300920663|ref|ZP_07137074.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 115-1]
 gi|300927129|ref|ZP_07142877.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 182-1]
 gi|300940245|ref|ZP_07154843.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 21-1]
 gi|300951787|ref|ZP_07165602.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 116-1]
 gi|300958862|ref|ZP_07170970.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 175-1]
 gi|301302865|ref|ZP_07208993.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 124-1]
 gi|301330401|ref|ZP_07223043.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 78-1]
 gi|301648263|ref|ZP_07248006.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 146-1]
 gi|309794445|ref|ZP_07688868.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 145-7]
 gi|187770602|gb|EDU34446.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4196]
 gi|189378616|gb|EDU97032.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC508]
 gi|208725969|gb|EDZ75570.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4206]
 gi|208735601|gb|EDZ84288.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4045]
 gi|209158713|gb|ACI36146.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4115]
 gi|300314514|gb|EFJ64298.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 175-1]
 gi|300404459|gb|EFJ87997.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 84-1]
 gi|300412344|gb|EFJ95654.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 115-1]
 gi|300416899|gb|EFK00210.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 182-1]
 gi|300448984|gb|EFK12604.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 116-1]
 gi|300454941|gb|EFK18434.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 21-1]
 gi|300526575|gb|EFK47644.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 119-7]
 gi|300529710|gb|EFK50772.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 107-1]
 gi|300841800|gb|EFK69560.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 124-1]
 gi|300843630|gb|EFK71390.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 78-1]
 gi|301073650|gb|EFK88456.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 146-1]
 gi|308121901|gb|EFO59163.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 145-7]
 gi|315256528|gb|EFU36496.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 85-1]
 gi|320185208|gb|EFW59988.1| Inosine-5'-monophosphate dehydrogenase [Shigella flexneri CDC
           796-83]
 gi|320188841|gb|EFW63500.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC1212]
 gi|324020068|gb|EGB89287.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 117-3]
 gi|325496462|gb|EGC94321.1| inosine 5'-monophosphate dehydrogenase [Escherichia fergusonii
           ECD227]
 gi|326344990|gb|EGD68734.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. 1044]
          Length = 503

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 7   LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 66

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 67  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 123

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 124 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 180

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 181 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 219


>gi|325959703|ref|YP_004291169.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325331135|gb|ADZ10197.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 293

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 59/123 (47%), Gaps = 2/123 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 + +  +   +  +     + +A  ILS++      VV E   + GI+T  DI R
Sbjct: 165 RSIPKKTVLEVASTDLIQLDPTDSIRNASKILSDRDIEGAPVV-EDGHVIGILTLSDIIR 223

Query: 275 NFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +     +V +VM  KN   + +D ++  A++++ +++I  ++VVDD    IGIV   
Sbjct: 224 AIGRGDEEQNVSEVMSSKNIITVKQDLMIADAIEIMNKNSIGRVIVVDDDASPIGIVTRT 283

Query: 334 DLL 336
           DLL
Sbjct: 284 DLL 286



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +   +V +V   +   +     +  A ++L   +I    VV +    IGI+   D++R
Sbjct: 165 RSIPKKTVLEVASTDLIQLDPTDSIRNASKILSDRDIEGAPVV-EDGHVIGILTLSDIIR 223

Query: 338 F 338
            
Sbjct: 224 A 224


>gi|253582896|ref|ZP_04860114.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
           27725]
 gi|251835102|gb|EES63645.1| inosine-5'-monophosphate dehydrogenase [Fusobacterium varium ATCC
           27725]
          Length = 484

 Score = 90.0 bits (222), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++ +  ++
Sbjct: 42  NVPVLSAAMDTVTESDLAIALARQGGIGFIHKNMSIADQAAEVDRVKRIESGMIRNPVTL 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              K  C +  A  ++   +   + V+++  KL GI+T  DI   +HKD+  L V ++M 
Sbjct: 102 ---KEDCTVGFAEDLMRRYKISGLPVIEDDGKLIGIVTNRDIK--YHKDMEQL-VGEIMT 155

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A ++L  + I  L + D+     G++   D+
Sbjct: 156 KENLITAPVGTTLEQAKEVLLSNRIEKLPITDESGYLKGLITIKDI 201


>gi|322834121|ref|YP_004214148.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321169322|gb|ADW75021.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 282

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   ++      ++AEK+  S+L ++L      +   A+  +   + ++V++GIG S
Sbjct: 87  NQILSTDSLHVVGEKLLAEKQ--SALRATLDINSEPRLQIALSMLIGAR-KIVLSGIGAS 143

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +            +  ++++DL++ +S+SG  +E+      AR
Sbjct: 144 GLVAKDLAYKLLKIGVTAIAESDTHVLVATVQALSKEDLLLAISFSGERNEINLAAKVAR 203

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++AIT  + + +   AD  L           G A  ++   Q ++ D L +AL++
Sbjct: 204 ESGAKVLAITGFSPNTLQQQADHCLYT-VAELPATRGAA-LSATTAQYSLTDLLFVALVQ 261

Query: 196 S 196
            
Sbjct: 262 Q 262


>gi|293376312|ref|ZP_06622550.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325845261|ref|ZP_08168565.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|292645060|gb|EFF63132.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325488702|gb|EGC91107.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 286

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 84/198 (42%), Gaps = 7/198 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSS----LESSLQGELSFQFHCAVE 58
           F  +  K +T +   ++ N  + C         +   +    L  +L+          V+
Sbjct: 66  FKINLTKELTLQEEKVIMNPNISCNEEVTETAMKLFQATSEVLHQTLEKINPHMIVQCVQ 125

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            +   + ++ I GIG SG + +     L   G  SF +  +        ++ +DD+I+ +
Sbjct: 126 MLTKAR-KIYIIGIGYSGIVATDFNYKLMRIGANSFPIIDSHTMLMLASIMHQDDIILAI 184

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG++DE+   ++ A++    +IA+T    S +   AD+ LT      +   G    TS
Sbjct: 185 SHSGNTDEVIETVHLAKQQGAKIIALTENYNSPLLQLADVFLTYQSNETTFETGSV--TS 242

Query: 179 AIMQLAIGDALAIALLES 196
            + Q+ + D +   +++ 
Sbjct: 243 KLAQMFMLDLIYTEMIKE 260


>gi|320012117|gb|ADW06967.1| CBS domain containing membrane protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 224

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G    +   +LSE     V VVDEG +  G+++E D+ RN            +M   
Sbjct: 17  VQRGTTFKEIARLLSESNVTAVPVVDEGGRPVGVVSEADLLRNRSTG-GARDAGALMSHP 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                    +  A +++ +H +  L VVD   + +G++   DL+R
Sbjct: 76  AVTAEPRWNVVHAARVMEEHRVKRLPVVDAAGRLVGVLSRSDLVR 120



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  L+V D+M  +   +   T      +LL + N++ + VVD+  + +G+V   DLLR
Sbjct: 1   MGHLTVADLMTPSVISVQRGTTFKEIARLLSESNVTAVPVVDEGGRPVGVVSEADLLR 58



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPK 294
           ++ A  ++ E R   + VVD   +L G+++  D+ R F    + +    VE+V+ +  +
Sbjct: 85  VVHAARVMEEHRVKRLPVVDAAGRLVGVLSRSDLVRVFLRRDRAIQEEIVEEVVTRTLR 143


>gi|259415648|ref|ZP_05739569.1| cyclic nucleotide-binding protein [Silicibacter sp. TrichCH4B]
 gi|259348878|gb|EEW60640.1| cyclic nucleotide-binding protein [Silicibacter sp. TrichCH4B]
          Length = 602

 Score = 90.0 bits (222), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 46/137 (33%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P    G+     +          +      +  A   +       + V D+    
Sbjct: 121 FDRRRPPPPNGSGLATITVAQLMSRDPVICAPETSIRTAAEQMYHHHISSICVCDQNG-F 179

Query: 264 KGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+              +  +M ++   +  + L+T  + L+ + NI  + +VD
Sbjct: 180 HGIVTLRDMNSKVVVGGADPLAPIATIMTQDVLTLAPEALVTDVLHLMVERNIHHVPIVD 239

Query: 322 DCQKAIGIVHFLDLLRF 338
                +GIV   DL R 
Sbjct: 240 GAG-LLGIVTQTDLTRA 255


>gi|170684009|ref|YP_001744693.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli SMS-3-5]
 gi|188024721|ref|ZP_02773455.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4113]
 gi|189009938|ref|ZP_02803481.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4076]
 gi|189402268|ref|ZP_02781287.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4401]
 gi|189403140|ref|ZP_02793607.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4486]
 gi|189403950|ref|ZP_02786126.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4501]
 gi|189405044|ref|ZP_02812861.2| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC869]
 gi|191167691|ref|ZP_03029500.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B7A]
 gi|193064701|ref|ZP_03045779.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E22]
 gi|208819189|ref|ZP_03259509.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4042]
 gi|217327325|ref|ZP_03443408.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. TW14588]
 gi|293446861|ref|ZP_06663283.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B088]
 gi|301022366|ref|ZP_07186255.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 196-1]
 gi|332278339|ref|ZP_08390752.1| inositol-5-monophosphate dehydrogenase [Shigella sp. D9]
 gi|170521727|gb|ACB19905.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli SMS-3-5]
 gi|188017110|gb|EDU55232.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4113]
 gi|189003285|gb|EDU72271.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4076]
 gi|189356637|gb|EDU75056.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4401]
 gi|189362203|gb|EDU80622.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4486]
 gi|189368444|gb|EDU86860.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4501]
 gi|189372350|gb|EDU90766.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC869]
 gi|190902290|gb|EDV62030.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B7A]
 gi|192927584|gb|EDV82200.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E22]
 gi|208739312|gb|EDZ86994.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4042]
 gi|217319692|gb|EEC28117.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. TW14588]
 gi|291323691|gb|EFE63119.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B088]
 gi|299881279|gb|EFI89490.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 196-1]
 gi|326340306|gb|EGD64110.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. 1125]
 gi|330912280|gb|EGH40790.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli AA86]
 gi|332100691|gb|EGJ04037.1| inositol-5-monophosphate dehydrogenase [Shigella sp. D9]
          Length = 511

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 15  LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 74

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 75  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 131

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 132 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 188

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 189 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 227


>gi|268315690|ref|YP_003289409.1| CBS domain containing protein [Rhodothermus marinus DSM 4252]
 gi|262333224|gb|ACY47021.1| CBS domain containing protein [Rhodothermus marinus DSM 4252]
          Length = 216

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 45/118 (38%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDL 280
               +  +     L  A  ++ E     + VVDE  +L GI+T+ D+         H   
Sbjct: 7   MQRPVQTIAPDATLAAAYRLMQEHAIRHLPVVDE-GRLVGIVTDRDLRLATSALHPHPFP 65

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V  VM +          +  A +L+R   I  L V+D  +  +GIV   DLL  
Sbjct: 66  PDARVASVMQRRVVTAAPLDPVEEAARLMRMRRIGCLPVLDGDE-LVGIVTVTDLLEA 122



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+DVM +  + I  D  L  A +L+++H I  L VVD+  + +GIV   DL
Sbjct: 3   VQDVMQRPVQTIAPDATLAAAYRLMQEHAIRHLPVVDE-GRLVGIVTDRDL 52



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            P+ +A  ++  +R GC+ V+D G +L GI+T  D+     +
Sbjct: 85  DPVEEAARLMRMRRIGCLPVLD-GDELVGIVTVTDLLEALLR 125


>gi|103488184|ref|YP_617745.1| signal-transduction protein [Sphingopyxis alaskensis RB2256]
 gi|98978261|gb|ABF54412.1| putative signal-transduction protein with CBS domains [Sphingopyxis
           alaskensis RB2256]
          Length = 141

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMI 290
           +    +     +L++ R G V VVD G  + GI +E DI R   ++  +     ++DVM 
Sbjct: 18  QPDDTVRAVADLLAQNRIGAVPVVD-GDAVVGIFSERDIVRLISSYGPEALDRRIDDVMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           K+P     D  + VA+  + Q  I  L VV +  K +G V   DL+++ I
Sbjct: 77  KSPITCAPDMAVIVALSQMTQKRIRHLPVV-EGGKMVGFVSIGDLVKYRI 125



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 19/49 (38%), Gaps = 1/49 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +      D  +     LL Q+ I  + VVD     +GI    D++R 
Sbjct: 11  TGSVISAQPDDTVRAVADLLAQNRIGAVPVVDGD-AVVGIFSERDIVRL 58


>gi|289450948|gb|ADC93865.1| mannose-1-phosphate guanyltransferase [Leptospira interrogans
           serovar Canicola]
          Length = 351

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+     L +AI IL ++    V +VDE +KL G +T+GD+ R   ++    +SV +
Sbjct: 5   KNVLINSNLSLQEAIKILDKEALRIVLIVDENKKLLGTLTDGDVRRALMQNKGLAISVNE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM   PKV   +      +  + ++ +  L +VD+    +G+     LL
Sbjct: 65  VMSSKPKVAHANWTKERMLLEMEKYELLHLPIVDEQGILVGLETVHGLL 113


>gi|315166372|gb|EFU10389.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1341]
          Length = 282

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + AV+ ++  +    + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNEAVDLLEKTEVN-FVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+I+IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIISITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|294140464|ref|YP_003556442.1| CBS domain-containing protein [Shewanella violacea DSS12]
 gi|293326933|dbj|BAJ01664.1| CBS domain protein [Shewanella violacea DSS12]
          Length = 620

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 4/128 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   L   +           ++     + DA   +   R   V V+D   +L GI+T+ D
Sbjct: 147 KAKELATTSRVNTLMSTQPLVIDSKASVGDAAKKMRLARVSSVLVMD-NHRLVGILTDRD 205

Query: 272 IF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +  R   +     L V   M   P  ++  +L+  AM L+ + +I  L +V++    IGI
Sbjct: 206 LRNRVLAEGQGVHLPVHQAMTPGPITLISSSLVFEAMLLMSEQSIHHLPIVEE-GVPIGI 264

Query: 330 VHFLDLLR 337
           +   D+LR
Sbjct: 265 LTSTDILR 272


>gi|293375933|ref|ZP_06622194.1| inosine-5'-monophosphate dehydrogenase [Turicibacter sanguinis
           PC909]
 gi|325837354|ref|ZP_08166378.1| inosine-5'-monophosphate dehydrogenase [Turicibacter sp. HGF1]
 gi|292645455|gb|EFF63504.1| inosine-5'-monophosphate dehydrogenase [Turicibacter sanguinis
           PC909]
 gi|325491012|gb|EGC93308.1| inosine-5'-monophosphate dehydrogenase [Turicibacter sp. HGF1]
          Length = 492

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 63/167 (37%), Gaps = 10/167 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       LAIAL       F   +  +     ++  + +  + ++      
Sbjct: 45  NIPIISSAMDTVTESRLAIALAHQGGVGFIHKNMSIEEQAEEVRRVKLYQNGMI---SDP 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +A       +     VV+E   L GIIT  D+    +++  T+ V +VM 
Sbjct: 102 VTLSADITIAEANEKCKHYKVSGFPVVNENGILTGIITNRDMK---YREDQTVKVSEVMT 158

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                      T L  A Q+L QH I  L +++D     G+V   D+
Sbjct: 159 GRDALITAPVGTTLDEAKQILMQHRIEKLPIINDAGILCGLVTIKDI 205


>gi|282860881|ref|ZP_06269947.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. ACTE]
 gi|282564617|gb|EFB70153.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. ACTE]
          Length = 500

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 44/174 (25%), Positives = 63/174 (36%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTEARMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + ++ R   V V D   KL GI+T  D+   F  D     V
Sbjct: 101 MVTDPITVNPDATLGEADALCAKFRISGVPVTDSAGKLLGIVTNRDM--AFESD-RARQV 157

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V          AM+LLR+H I  L +VDD     G++   D  + 
Sbjct: 158 REVMTPMPLVTGRVGISGVDAMELLRRHKIEKLPLVDDAGILKGLITVKDFKKA 211


>gi|91789990|ref|YP_550942.1| signal-transduction protein [Polaromonas sp. JS666]
 gi|91699215|gb|ABE46044.1| putative signal-transduction protein with CBS domains [Polaromonas
           sp. JS666]
          Length = 486

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDI--FRNFHKDLNT 282
           +      V +  PL +A+ I+   R G + VVD   ++  GI T  D+       +    
Sbjct: 24  ARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQMPLGIFTLRDLLHRVTLPQVNLD 83

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  VM      +   T    A  ++ +  +  L++VD+    + IV   DL
Sbjct: 84  QPIASVMTGGVITVKPHTTAYEAPLIMARRGLRHLLMVDEAGHLVSIVSQNDL 136



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLL 336
            +  +  + P  +  DT L  A+ ++ +  I  ++VVD   +  +GI    DLL
Sbjct: 19  PLSQIARREPVTVTLDTPLGEALAIMDRMRIGSIIVVDAQGQMPLGIFTLRDLL 72


>gi|300245687|gb|ADJ93901.1| putative phenylphosphate synthetase stimulating protein [Clostridia
           bacterium enrichment culture clone BF]
          Length = 221

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 51/128 (39%), Gaps = 13/128 (10%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---------- 273
            H   +   +     L     IL + +F  + VVD   +L GI+T+ D+           
Sbjct: 5   QHMTRNPVTISPETTLPAVREILGKGKFRHLPVVDGENRLIGIVTDRDLRSAAPSSVLPK 64

Query: 274 ---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              +  H + +   V  +M +    +   + L  A+ LL +  I  L VVD  Q+ IG+ 
Sbjct: 65  ERLKACHSEFDQTPVSAIMSRAFFTLTPMSTLDDALILLDREKIGALPVVDQEQRVIGMF 124

Query: 331 HFLDLLRF 338
              DL+  
Sbjct: 125 STRDLMAA 132



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   M +NP  I  +T L    ++L +     L VVD   + IGIV   DL
Sbjct: 3   ITQHMTRNPVTISPETTLPAVREILGKGKFRHLPVVDGENRLIGIVTDRDL 53



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 37/82 (45%), Gaps = 7/82 (8%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             L DA+ +L  ++ G + VVD+ Q++ G+ +  D+   + +          M     V+
Sbjct: 94  STLDDALILLDREKIGALPVVDQEQRVIGMFSTRDLMAAYRRLFGLGERGSAM----IVV 149

Query: 297 LED---TLLTVAMQLLRQHNIS 315
             D     L+   ++L +H+I 
Sbjct: 150 EHDGKRKPLSRIAKVLEEHSIR 171


>gi|255513493|gb|EET89759.1| Malate dehydrogenase [Candidatus Micrarchaeum acidiphilum ARMAN-2]
          Length = 473

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 67/189 (35%), Gaps = 14/189 (7%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +A      + +            P  S+ M      ++A+A+            V+H   
Sbjct: 26  LAKTEPKNIDITSRFSKGIKLKVPLISSPMDSVTESSMAVAIAREGGIG-----VIHRNC 80

Query: 212 KLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            L         V  +   I      +     + +A  ++ +     + VVD   KL GII
Sbjct: 81  SLEEELAMVKSVKRAESFIIRDVVTIGKTAKVSEADELMQKHGISGLPVVD-SGKLIGII 139

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  D+      +    +VE+ M K+     E      A+ LL+QH I  L VVD      
Sbjct: 140 TGRDVR----SNEPGSTVEEAMTKDVISASEGITEAEAISLLKQHRIEKLPVVDSKGNLK 195

Query: 328 GIVHFLDLL 336
           G++ + D+ 
Sbjct: 196 GLITYKDVT 204


>gi|237651041|ref|ZP_04525293.1| inositol-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CCRI 1974]
 gi|237821154|ref|ZP_04596999.1| inositol-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           CCRI 1974M2]
          Length = 492

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADEVRKVKRSENGVII 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               +     + +A  ++   R   V VV+  E +KL GI+T  D+   F  D N   + 
Sbjct: 100 DAFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRDLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|41627|emb|CAA26133.1| unnamed protein product [Escherichia coli]
          Length = 511

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 46/219 (21%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 15  LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 74

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 75  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 131

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 132 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 188

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 189 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 227


>gi|78186661|ref|YP_374704.1| IMP dehydrogenase [Chlorobium luteolum DSM 273]
 gi|78166563|gb|ABB23661.1| inosine-5'-monophosphate dehydrogenase [Chlorobium luteolum DSM
           273]
          Length = 497

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  S        +  V     ++  +    S ++ +  ++
Sbjct: 41  KIPMVSAAMDTVTEAGLAIALARSGGIGIIHKNLSVAEQAREVAKVKRFESGIIRNPFTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE-------GQKLKGIITEGDIFRNFHKDLNTL 283
                   + DAI ++       + VV+          KLKGI+T  D+     K     
Sbjct: 101 Y---EDATMQDAIDLMLRHSISGIPVVERPKSGDSGEMKLKGIVTNRDLR---MKPAPDA 154

Query: 284 SVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++M  +N     ED  L  A + L  + I  L++ D      G++ F D+
Sbjct: 155 KIANIMTSRNLITAREDVSLEAAEETLLTNKIEKLLITDAEGHLKGLITFKDI 207


>gi|86137280|ref|ZP_01055857.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. MED193]
 gi|85825615|gb|EAQ45813.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. MED193]
          Length = 607

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 66/180 (36%), Gaps = 8/180 (4%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDAL----AIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
           E      G A T++      +   L      AL+++    +  F    P   +       
Sbjct: 83  ERGLTRGGRAATSARASMATVLLLLPRLDFDALMQAEPAVKRFFDRRRPETPIQNGLTTT 142

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                          G     A  ++ +    CV + D G +L GI+T  D+      + 
Sbjct: 143 RAESFMAAPPVTCSPGLTCQGAAQLMRQHHISCVCISD-GDELLGILTTRDLTEKLLAEG 201

Query: 281 N--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  V  VM K+P+ +    + +  +  + +H+I  + VV   Q+ +GI+   DL RF
Sbjct: 202 LPISTPVSQVMTKDPRSLPPSAIGSDVLHAMMEHHIGHIPVV-QNQQLVGIITQTDLTRF 260


>gi|317128267|ref|YP_004094549.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
 gi|315473215|gb|ADU29818.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
          Length = 864

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 42/229 (18%), Positives = 77/229 (33%), Gaps = 9/229 (3%)

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T D + IV+S     D +  +    RR    ++ +T  +           + +     S 
Sbjct: 204 TIDGVEIVISSHHQQDYIGQLAIITRR----ILELTGSDAVFSIVKMGEKVFITGRSNSE 259

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
              L P    +       A   A    +N      Y         T+    +        
Sbjct: 260 RVNLLPVIRELGGGGHKSA---ASAVKKNNDIEIIYEFIKKELSNTVSPSMTAQHLMSTP 316

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           + +V     + +A  +L         V++   +L G+I+  DI +  H  L    V+  M
Sbjct: 317 VHVVAEETSVEEASKMLYRYGHTGFPVINAS-QLVGVISRRDIDKALHHQLGHAPVKGFM 375

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +NP  I  +  L     L+    +  L V+ +  K +GIV   D++  
Sbjct: 376 SRNPLTISPEKSLEAIQALMIDKQVGRLPVL-ENGKLVGIVTRSDVIHA 423



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 32/205 (15%), Positives = 67/205 (32%), Gaps = 31/205 (15%)

Query: 109 ITRDDLIIVLSWSGS--------SDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           +T  D +  +   G         + E   +L   R              S V  + DI +
Sbjct: 234 LTGSDAVFSIVKMGEKVFITGRSNSERVNLLPVIRELGG---GGHKSAASAVKKNNDIEI 290

Query: 161 TLPKEPESCPHGLAPTTSA-------IMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
                 +   + ++P+ +A       +  +A   ++  A      +    F V++    +
Sbjct: 291 IYEFIKKELSNTVSPSMTAQHLMSTPVHVVAEETSVEEASKMLYRYGHTGFPVINASQLV 350

Query: 214 GTLFVCA--SDVMHSGDSIPL----------VKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           G +        + H     P+          +     L     ++ +K+ G + V+ E  
Sbjct: 351 GVISRRDIDKALHHQLGHAPVKGFMSRNPLTISPEKSLEAIQALMIDKQVGRLPVL-ENG 409

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVE 286
           KL GI+T  D+    H  L +  + 
Sbjct: 410 KLVGIVTRSDVIHAMHGKLKSKGIS 434


>gi|260773740|ref|ZP_05882655.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
 gi|260610701|gb|EEX35905.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
          Length = 619

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 52/122 (42%), Gaps = 4/122 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +            S+  V     + +A  I+         V+D   +L G++T+ D
Sbjct: 143 AGEEMLYLKRVKEVMNRSVAKVHTDTLVQEAAQIMVNSHRSSALVMDND-QLVGVVTDRD 201

Query: 272 I-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +  R     L     +  +M ++P+ I  D LL  AM+++  HN+  L V+ + ++ +G+
Sbjct: 202 MTKRVIAAGLTLNTPISQIMTQHPQTIQSDALLLEAMEMMMLHNVRSLPVL-EGEQVVGV 260

Query: 330 VH 331
           + 
Sbjct: 261 LT 262



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              + L    V++VM ++   +  DTL+  A Q++   + S  +V+D+ Q  +G+V   D
Sbjct: 143 AGEEMLYLKRVKEVMNRSVAKVHTDTLVQEAAQIMVNSHRSSALVMDNDQ-LVGVVTDRD 201

Query: 335 LLR 337
           + +
Sbjct: 202 MTK 204


>gi|217977508|ref|YP_002361655.1| inosine-5'-monophosphate dehydrogenase [Methylocella silvestris
           BL2]
 gi|217502884|gb|ACK50293.1| inosine-5'-monophosphate dehydrogenase [Methylocella silvestris
           BL2]
          Length = 496

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 9/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIAL ++          L P  +   +                
Sbjct: 45  NLPVISSAMDTVTEARLAIALAQAGGIGVIH-RNLEPAEQAEEVRKVKRYESGMVVDPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA+ ++       + VV+        +L GI+T  D+      D     V +
Sbjct: 104 IFPDETLADALALMRRHEISGIPVVERSPAGKPARLCGILTNRDVRFA---DNPLEPVSN 160

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K    + E      A +LL QH +  L+VVDD  + +G+V   D+ + 
Sbjct: 161 LMTKEIITVREGVSQDEARRLLHQHRLEKLVVVDDDFRCVGLVTVKDMEKA 211


>gi|15673115|ref|NP_267289.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|281491628|ref|YP_003353608.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           lactis KF147]
 gi|12724094|gb|AAK05231.1|AE006345_11 transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|281375346|gb|ADA64859.1| Transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis KF147]
 gi|326406680|gb|ADZ63751.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis CV56]
          Length = 283

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 62/153 (40%), Gaps = 3/153 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  +   AV  I A +  + + GIG S  +   +    +  G    F+  A      L +
Sbjct: 116 LDDEIMEAVSSIDAAEN-IFVFGIGASSMVAQDIFQKFSRIGKQVIFIQDAHLFVSSLSV 174

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
             +  + I +S  G + E+  +    +   IP+IAITS   S +   AD +L      E 
Sbjct: 175 SNKKTIFIGISMKGETKEVLELASVVKNMKIPIIAITSRENSSLGQMADCILH-SVSGED 233

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                A T S + QL + D L    +   +F+E
Sbjct: 234 YQMRTAATMSLMAQLYVVDILFYMYVSE-HFTE 265


>gi|317121307|ref|YP_004101310.1| Cl- channel voltage-gated family protein [Thermaerobacter
           marianensis DSM 12885]
 gi|315591287|gb|ADU50583.1| Cl- channel voltage-gated family protein [Thermaerobacter
           marianensis DSM 12885]
          Length = 639

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/203 (18%), Positives = 79/203 (38%), Gaps = 7/203 (3%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           L+ + +   +        +L + +        LA   + ++ + +  AL+   + +    
Sbjct: 415 LVGMGAVLAATTQAPIQAILIVFEMTRDYRIILALMMACVVAVLVSTALSADSVYTIKLR 474

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                +    G+  T+               +V+   PL   I ++   R     VVDE 
Sbjct: 475 RRGIRLR--AGRDVTVLQRIPVQEAMTAKPVVVRRDWPLARVIRVMQSSRHNGFPVVDEN 532

Query: 261 QKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             L G+IT  DI   +    +    ++VE  M  NP V   D  L   ++ L ++++  L
Sbjct: 533 GHLVGVITLADIRNTYPDEPERRLAVAVEQAMTPNPVVAYPDESLAQVLERLGRYDVGRL 592

Query: 318 MVV--DDCQKAIGIVHFLDLLRF 338
            VV   D ++ +G++   D+++ 
Sbjct: 593 PVVARGDPRQLLGVITRSDVIKA 615


>gi|227487030|ref|ZP_03917346.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51867]
 gi|227093104|gb|EEI28416.1| inositol-5-monophosphate dehydrogenase [Corynebacterium
           glucuronolyticum ATCC 51867]
          Length = 533

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 50/197 (25%), Positives = 70/197 (35%), Gaps = 26/197 (13%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL LP E    P G               P  SA M       +AIA+            
Sbjct: 51  VLLLPAESNVIPSGVHTKTRLSKGIELNIPILSAAMDTVTEARMAIAMARHGGIG----- 105

Query: 206 VLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           VLH    +         V  S         +      +     I  +     + VVDE  
Sbjct: 106 VLHRNLSVEDQVHEVERVKRSESGMITDPVVATPDMTIAQVDEICGKYHISGLPVVDEKD 165

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVV 320
           KL GI T  D+   F  D+N L V+DVM   P  V  E      A++LL +H +  L +V
Sbjct: 166 KLLGICTNRDMR--FEPDMNRL-VKDVMTPMPLIVAKESVTKPEALKLLSEHRVEKLPIV 222

Query: 321 DDCQKAIGIVHFLDLLR 337
            D    +G++   D ++
Sbjct: 223 KDDNTLVGLITVKDFVK 239


>gi|55377595|ref|YP_135445.1| inosine-5'-monophosphate dehydrogenase [Haloarcula marismortui ATCC
           43049]
 gi|55230320|gb|AAV45739.1| inosine-5'-monophosphate dehydrogenase [Haloarcula marismortui ATCC
           43049]
          Length = 494

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            VLH       +      V  + + I  
Sbjct: 50  TVPVVSAAMDTVTESDMAIAMARQGGIG-----VLHRNMNADQMATEIERVKRADELIIR 104

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVED 287
                     + +   ++  +      VVD+   ++ GII+  DI        +   V D
Sbjct: 105 DVVTASPNQTVREVDEMMEHEGVSGAPVVDDDNGEVLGIISGTDIRPYLEVGEDDA-VTD 163

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            M        ED     A++L+  H I  + +VD   + +G+V    +L+
Sbjct: 164 AMTDEVVTAPEDVTPREALELMYDHKIERVPIVDGENRLVGLVTMQGILQ 213


>gi|270264777|ref|ZP_06193042.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
 gi|270041460|gb|EFA14559.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
          Length = 282

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 82/181 (45%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++ +  ++     ++ EK+  S+L ++L      + H A++ ++  + R+++ GIG S
Sbjct: 87  NRILSSDALKTVGEKLLVEKQ--SALRATLDINSEERLHQALDMLRQAR-RIILVGIGAS 143

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +    +  L   G  +            +  + + DL++ +S+SG   E+      AR
Sbjct: 144 GLVAKDFSYKLLKIGVMAIAEPDMHVQLAAVQALDKRDLLLAISFSGERREINLAAEEAR 203

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +AL++
Sbjct: 204 LAGAKVLALTSFSPNGLQQRADHCLYT--IAEEPNTRSAAISSSTAQFALTDLLFMALIQ 261

Query: 196 S 196
            
Sbjct: 262 H 262


>gi|313116905|ref|YP_004038029.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
 gi|312294857|gb|ADQ68893.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
          Length = 392

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDEGQKLKGIITEG 270
           K     +  SDVM S +++  V     + D +  + +E+  G    V     L G++T  
Sbjct: 241 KAAFEDITVSDVMTSEENLETVSEETTISDLLARMFTERHIG--YPVMRNGDLVGMVTLD 298

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D       + +   VEDVM   P     D     A Q ++Q+ +  L VV+D    +GI+
Sbjct: 299 DAGAIEEVERDAYRVEDVMSTEPHTTSPDADAMTAFQQMQQNGVGRLPVVNDAGDLVGII 358

Query: 331 HFLDLLRF 338
              D++R 
Sbjct: 359 SRTDMMRA 366



 Score = 43.0 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 25/65 (38%), Gaps = 2/65 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +        DVM +             + A   + +   G + VV++   L GII+  D+
Sbjct: 306 VERDAYRVEDVMSTEPHTT--SPDADAMTAFQQMQQNGVGRLPVVNDAGDLVGIISRTDM 363

Query: 273 FRNFH 277
            R F+
Sbjct: 364 MRAFN 368


>gi|326483812|gb|EGE07822.1| sugar isomerase [Trichophyton equinum CBS 127.97]
          Length = 455

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 51/205 (24%), Positives = 83/205 (40%), Gaps = 42/205 (20%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  A+  I  E+  L +LE             A   +  +  R+              L+
Sbjct: 59  VDTAIHVIATERAALENLERVYSTN-----ELARNNMDELWNRLPT------------LS 101

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE-------------LKAI 130
             + +      F+H  EA HGDLGM+   D ++ +++SG + E             +  I
Sbjct: 102 MRIQADWIYCSFLHPTEALHGDLGMVRPTDTVLFITYSGKTSELLLVLPHLPPTTSVIVI 161

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQLAIGDAL 189
             Y +  S PL+A +S   +++   + I      EPE    G  APT+S  + LA+GDAL
Sbjct: 162 TAYKQPSSCPLLAGSSNANTIL-LPSPIH-----EPEEVSFGVCAPTSSTTVALAVGDAL 215

Query: 190 AIALLESRNFSE-----NDFYVLHP 209
           A+A+    + +        F   HP
Sbjct: 216 ALAVARRLHTTPGRGPAEVFKGYHP 240


>gi|317124159|ref|YP_004098271.1| inosine-5'-monophosphate dehydrogenase [Intrasporangium calvum DSM
           43043]
 gi|315588247|gb|ADU47544.1| inosine-5'-monophosphate dehydrogenase [Intrasporangium calvum DSM
           43043]
          Length = 505

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           +             +P  SA M       +AIA+            VLH    +      
Sbjct: 36  IDTSTRLTRELTIKSPLISAAMDTVTEARMAIAMAREGGIG-----VLHRNLSIADQAYQ 90

Query: 220 ASDVMHSGD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  +      +   +     L D      E R   + VVD  ++L GI+T  D+   
Sbjct: 91  VDLVKRTQTGIISNPITIGADATLEDLDQKCGEYRVSGLPVVDGDKRLIGIVTNRDLRFT 150

Query: 276 FHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             K+  T  V +VM   P     E      A  LLRQH    L +VD+    +G++   D
Sbjct: 151 PVKEWATTRVHEVMTPMPLITGPEGISREDATLLLRQHKRERLPLVDEQGHLVGLITVKD 210

Query: 335 LLR 337
            ++
Sbjct: 211 FVK 213


>gi|32266201|ref|NP_860233.1| inosine 5'-monophosphate dehydrogenase [Helicobacter hepaticus ATCC
           51449]
 gi|32262251|gb|AAP77299.1| Inosinic acid dehydrogenase GuaB [Helicobacter hepaticus ATCC
           51449]
          Length = 481

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AIA+            ++H    + +       V  S   + +
Sbjct: 40  NVPLVSAAMDTVTECRTAIAMARLGGIG-----IIHKNMDIDSQVEQIKRVKKSESGVII 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA +I    +   V VVDE  KL GI+T  D+   F +DL+   V D+
Sbjct: 95  DPIYIRANNTLADAKSITDNYKISGVPVVDEYGKLIGILTNRDMR--FEQDLSKY-VGDL 151

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K+        T L  A +++ ++ I  L +VD+     G++   D+ +
Sbjct: 152 MTKDSLVTAKVGTTLEEAKEIMHKNRIEKLPIVDENYMLKGLITIKDIQK 201



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + + DS+   K+G  L +A  I+ + R   + +VDE   LKG+IT  DI +   
Sbjct: 149 GDLMTKDSLVTAKVGTTLEEAKEIMHKNRIEKLPIVDENYMLKGLITIKDIQKRIE 204


>gi|238753919|ref|ZP_04615279.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           ruckeri ATCC 29473]
 gi|238707907|gb|EEQ00265.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           ruckeri ATCC 29473]
          Length = 280

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 39/181 (21%), Positives = 78/181 (43%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++    ++     ++AEK    +L ++L      +   A+  +K  + RV++ GIG S
Sbjct: 85  NQILSTDYLKIVGEKLLAEKNA--ALRATLDINSEQRLEQALNMLKNAR-RVILLGIGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   L+  L   G  +            +  +   DL++ +S+SG   E+      AR
Sbjct: 142 GLVAKDLSYKLLKIGIMAVSEADMHVQLAAVQAMGPQDLLLAISFSGERREVNLAAEEAR 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 TAGAKVLALTSFSPNGLQQRADHCLYT--IAEEPAIRSAAISSSTAQFALTDLLFMAIIQ 259

Query: 196 S 196
            
Sbjct: 260 Q 260


>gi|150400148|ref|YP_001323915.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150012851|gb|ABR55303.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 322

 Score = 89.6 bits (221), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 4/127 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +    S        +  +K      + + ++ E R     VVD   KL GI+T  D+  
Sbjct: 47  KILEKISASEIMTKKVISLKEDDSTEELVRLIKEYRHMGYPVVDSNNKLSGIVTFEDLRT 106

Query: 275 NFHK--DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              K   L  L ++D+M K  N   I  +T  + A +++ +H+I  L+VVD  +  +GI+
Sbjct: 107 KKQKFGALKKLKIKDIMTKKGNLITISNETSASEAQRIMVKHDIGRLIVVDSMENFVGIL 166

Query: 331 HFLDLLR 337
              D++R
Sbjct: 167 TKGDIVR 173



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 30/82 (36%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                       +   D+M    ++  +       +A  I+ +   G + VVD  +   G
Sbjct: 105 RTKKQKFGALKKLKIKDIMTKKGNLITISNETSASEAQRIMVKHDIGRLIVVDSMENFVG 164

Query: 266 IITEGDIFRNFHKDLNTLSVED 287
           I+T+GDI R F        V D
Sbjct: 165 ILTKGDIVRTFEIYGENTKVND 186


>gi|332992296|gb|AEF02351.1| inosine 5'-monophosphate dehydrogenase [Alteromonas sp. SN2]
          Length = 489

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +     P  +   +              
Sbjct: 41  NIPMVSAAMDTVSEARLAIALAQEGGIGFIHKNM---EPAQQAKHVREVKKYESGVVSDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + IT+     +    V D    L GI+T  D+   F K L  L + +VM 
Sbjct: 98  VTVAKDATIGEVITLSKRLGYSGFPVTDHQNNLIGIVTGRDLR--FEKRL-ELPISNVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E       + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 GKDDLVTVKEGASSDQVLDLMHEHRIEKILVVDDAFKLTGLITVKDFQKA 204


>gi|284162404|ref|YP_003401027.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012401|gb|ADB58354.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 177

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 4/124 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             +   +    L+ A   + +   G V V+ E  +  GI+TE DI   
Sbjct: 1   MQSDIPVKEIMTREVCTARKDDTLLTASKKMIKFGVGSVVVI-EDGRPIGIVTEKDILYK 59

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +K  + + ++D+M      I   T L  A  ++R+  I  L VVDD    IGIV  
Sbjct: 60  VVSKNKLPSKVKLKDIMSTPLITIKPTTSLREAADIMRKRGIRRLPVVDDNGNLIGIVTD 119

Query: 333 LDLL 336
            D+L
Sbjct: 120 NDIL 123


>gi|256783098|ref|ZP_05521529.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|289766981|ref|ZP_06526359.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|289697180|gb|EFD64609.1| transcriptional regulator [Streptomyces lividans TK24]
          Length = 311

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 6/168 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + I  E R L    ++L  +       AV+ +   + RV I G+G S  +G  L   L  
Sbjct: 123 KIIYNEVRALEDSGAALDVD---ALGRAVDAVAKAR-RVDIFGVGASAFVGQDLHQKLHR 178

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +F      A+     ++   D+ + +S SG +++    L  A       IA+T++ 
Sbjct: 179 IGRMAFIWSDRHAALTATALLGPGDVALAVSHSGETEDTTEPLQAAAERGATTIALTNDP 238

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            S +A  AD+VLT        P     T S I QLA+ D L + + + 
Sbjct: 239 GSTLAAGADLVLTT--CARETPFRSGATVSRIAQLAVIDCLFVGVAQR 284


>gi|238759688|ref|ZP_04620848.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           aldovae ATCC 35236]
 gi|238702116|gb|EEP94673.1| Uncharacterized HTH-type transcriptional regulator yfhH [Yersinia
           aldovae ATCC 35236]
          Length = 280

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 81/181 (44%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     +++EK    +L ++L      +   A+E ++  + +V++ GIG S
Sbjct: 85  NQILSTDSLKTVGEKLLSEKTA--ALRATLDINSEQRLTQALEMLRTAR-KVILIGIGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +            +  +   DL++ +S+SG   E+      A+
Sbjct: 142 GLVAKDLAYKLLKIGVVAVSETDMHVQLAVVQALNVQDLVLAISFSGERREVNLAAEEAQ 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R    ++A+TS + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 202 RRGAKVLALTSFSPNNLQQRADHCLYT--ISEEPVIRSAAISSSTAQYALTDLLFMAMIQ 259

Query: 196 S 196
            
Sbjct: 260 Q 260


>gi|301168874|emb|CBW28467.1| IMP dehydrogenase [Haemophilus influenzae 10810]
          Length = 488

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDGENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|289192764|ref|YP_003458705.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
 gi|288939214|gb|ADC69969.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
          Length = 127

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L + I  +++     V VV +G++  GIIT+ D+ +++ +     + E++M  N
Sbjct: 18  VTLDTKLSEVIKTMAKYDISSV-VVSDGERFWGIITDTDVLKHYQE--LDKTAEEIMTVN 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
           P  +  +  L  A++++ +  I  L V      K +G++   D+++ 
Sbjct: 75  PVTVSPEAPLEKAIEIMAEKGIHHLYVKSPCEDKIVGVLSSKDIIKL 121



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V DVM K    +  DT L+  ++ + +++IS  +VV D ++  GI+   D+L+
Sbjct: 7   VRDVMKKGVVEVTLDTKLSEVIKTMAKYDISS-VVVSDGERFWGIITDTDVLK 58


>gi|119469088|ref|ZP_01612072.1| putative sugar-phosphate nucleotide transferase [Alteromonadales
           bacterium TW-7]
 gi|119447340|gb|EAW28608.1| putative sugar-phosphate nucleotide transferase [Alteromonadales
           bacterium TW-7]
          Length = 352

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              +++    + +A++++ ++      VVD+  KL G++T+GD+ R   + +  + SV +
Sbjct: 6   QKVVIEPSTSIKEALSVIDKEALRVALVVDKN-KLVGMVTDGDVRRGILQGIELSASVSE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VM  NP      +  +    L++   I  L +V+D  + +G+    D
Sbjct: 65  VMNTNPVSAKVSSSSSDLKALMQSRKILSLPIVNDDDQLVGLKTLYD 111



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 4/55 (7%)

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M  N    VI   T +  A+ ++ +  + V +VVD   K +G+V   D +R GI+
Sbjct: 1   MTINWQKVVIEPSTSIKEALSVIDKEALRVALVVDK-NKLVGMVTDGD-VRRGIL 53


>gi|121602869|ref|YP_988660.1| inositol-5-monophosphate dehydrogenase [Bartonella bacilliformis
           KC583]
 gi|120615046|gb|ABM45647.1| inosine-5'-monophosphate dehydrogenase [Bartonella bacilliformis
           KC583]
          Length = 499

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 19/177 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         V+H              V      + +
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGLG-----VIHRNMLSEEQAEAVRQVKKFESGMVV 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFRNFHKDLNT 282
                     L +A  ++       + VV+ G       +L GI+T  D+          
Sbjct: 101 NPVTIGPDATLEEAKDLMHFHGISGIPVVENGAKGGVVGRLVGILTNRDVRFASDP---R 157

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + ++M   N   + E+  L  A  LL  H I  L+VVD+  + +G+V   D+ + 
Sbjct: 158 QKIHELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVVDEQNRCVGLVTVKDIEKA 214


>gi|237784941|ref|YP_002905646.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium
           kroppenstedtii DSM 44385]
 gi|237757853|gb|ACR17103.1| inosine-5'-monophosphate dehydrogenase [Corynebacterium
           kroppenstedtii DSM 44385]
          Length = 504

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/209 (20%), Positives = 77/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +D++   +    +         P  SA M       +AIA+
Sbjct: 10  NKVALVGLTFDDVLLIPSASDVIPSEVDTSAQLTRNIRLGIPLVSAAMDTVTESRMAIAM 69

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       +LH    +         V  S      +      G  +     + ++ 
Sbjct: 70  ARQGGIG-----ILHRNLSIDDQAQNVEVVKRSEAGMVTNPITCSPGDTIGHVDELCAKF 124

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL-EDTLLTVAMQL 308
           R   + VV++   L GI T  D+   F  DL+   V DVM   P V+  E      A+ L
Sbjct: 125 RVSGLPVVNDEGMLVGICTNRDMR--FESDLSR-KVADVMTPMPLVVAQEGVSAEAALNL 181

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  H +  L +VD   K  G++   D ++
Sbjct: 182 LSTHKVEKLPIVDSAGKLTGLITVKDFVK 210


>gi|149918154|ref|ZP_01906646.1| CBS domain pair protein [Plesiocystis pacifica SIR-1]
 gi|149820914|gb|EDM80321.1| CBS domain pair protein [Plesiocystis pacifica SIR-1]
          Length = 639

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 10/140 (7%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D         +   ++     M +      V     +  A +++  +R   V V DE  K
Sbjct: 490 DLAAYEKVSDVRENYLQVGQFMTTDLLT--VHPEDLVDLAASLMDWERIRHVPVEDE-GK 546

Query: 263 LKGIITEGDIFRNFHK------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           L G+I+   + R   +      D   ++V D+M  +P  I  +T     +Q++R  NI+ 
Sbjct: 547 LVGLISHRAVLRLVARGHLSRADSEKVAVRDIMRADPITIKPETSTLECLQIMRDKNIAA 606

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L VV +  + +GIV   DL+
Sbjct: 607 LPVV-EGDRLVGIVTEHDLI 625



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 7/68 (10%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+  N+      L V   M  +   +  + L+ +A  L+    I  + V +D  K +G++
Sbjct: 499 DVRENY------LQVGQFMTTDLLTVHPEDLVDLAASLMDWERIRHVPV-EDEGKLVGLI 551

Query: 331 HFLDLLRF 338
               +LR 
Sbjct: 552 SHRAVLRL 559


>gi|18313646|ref|NP_560313.1| hypothetical protein PAE2866a [Pyrobaculum aerophilum str. IM2]
 gi|18161195|gb|AAL64495.1| conserved protein with CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 147

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 56/113 (49%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
           +   +  +     L +A+ ++ +   G + VV EG KL G+++E D+ R   + ++    
Sbjct: 34  APRELITIGPEKTLKEAVDLMVKYNIGFLPVV-EGGKLLGVLSESDVMRLVAQGVDLNTP 92

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   M   P  + + + L  A +L+ +HNI  L V+ +  K + ++   D+++
Sbjct: 93  ISVYMNTKPITVSKQSTLREAAELMVKHNIRHLPVI-EDGKVVAVLSVKDIVK 144


>gi|330505331|ref|YP_004382200.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328919617|gb|AEB60448.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 643

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
                PL DA+ ++ E+  G + V+D   K  GI T  D+ R     ++    ++++M  
Sbjct: 190 CAPDTPLRDAVRLMHEQHVGSIVVLDPADKPLGIFTLRDLRRVVADGVDLAQPIDNLMTP 249

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D     A   + + +I+ + +V+   K  G++   DL
Sbjct: 250 NPFHLAPDASAFDAAIAMTERHIAHVCLVEHE-KLCGVISERDL 292



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 29/56 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + ++ ++ P     DT L  A++L+ + ++  ++V+D   K +GI    DL R
Sbjct: 176 DTRLGELAMRQPIGCAPDTPLRDAVRLMHEQHVGSIVVLDPADKPLGIFTLRDLRR 231


>gi|319408155|emb|CBI81808.1| inosine-5'-monophosphate dehydrogenase [Bartonella schoenbuchensis
           R1]
          Length = 499

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 70/200 (35%), Gaps = 13/200 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L      +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVDLKTRIAADIELN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A  ++       + VV+ G       
Sbjct: 80  SPTEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKNLMRSHGISGIPVVENGAKGGISG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           KL GI+T  D+            + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 KLVGILTNRDVRFASDP---KQKIRELMTHENLITVRENVQLDEAKCLLHYHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  + +G+V   D+ +  +
Sbjct: 197 DEQNRCVGLVTVKDIEKARL 216


>gi|145637233|ref|ZP_01792895.1| bifunctional glutathionylspermidine amidase/glutathionylspermidine
           synthetase [Haemophilus influenzae PittHH]
 gi|145269678|gb|EDK09619.1| bifunctional glutathionylspermidine amidase/glutathionylspermidine
           synthetase [Haemophilus influenzae PittHH]
          Length = 488

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVDE   L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLMLAELAEMVKKNGFAGYPVVDEENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|16272183|ref|NP_438392.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae Rd
           KW20]
 gi|148827362|ref|YP_001292115.1| inosine 5'-monophosphate dehydrogenase [Haemophilus influenzae
           PittGG]
 gi|260580894|ref|ZP_05848719.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           RdAW]
 gi|1170553|sp|P44334|IMDH_HAEIN RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1573185|gb|AAC21890.1| inosine-5'-monophosphate dehydrogenase (guaB) [Haemophilus
           influenzae Rd KW20]
 gi|148718604|gb|ABQ99731.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           PittGG]
 gi|260092517|gb|EEW76455.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           RdAW]
          Length = 488

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDGENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|308178047|ref|YP_003917453.1| IMP dehydrogenase [Arthrobacter arilaitensis Re117]
 gi|307745510|emb|CBT76482.1| IMP dehydrogenase [Arthrobacter arilaitensis Re117]
          Length = 501

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P +SA M       +AIAL            V+H    + +       V  S      
Sbjct: 44  QVPISSAAMDTVTEAPMAIALARQGGIG-----VIHRNLSIESQAKQVDQVKRSESGMIT 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V  G  L +   + ++ R   + VVDE +KL GIIT  D      +   T  V +V
Sbjct: 99  DPVTVHPGATLAEWDELCAQYRVSGLPVVDENRKLLGIITNRDTRFVPRERYMTTKVYEV 158

Query: 289 MIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   P V   D +     ++LL ++ I  L ++D+  K  G++   D  + 
Sbjct: 159 MTGMPLVTAHDGVAPEKVIELLSKNRIEKLPLIDNDGKLTGLITVKDFDKA 209


>gi|293400324|ref|ZP_06644470.1| CBS domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
 gi|291306724|gb|EFE47967.1| CBS domain protein [Erysipelotrichaceae bacterium 5_2_54FAA]
          Length = 215

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 36/124 (29%), Positives = 61/124 (49%), Gaps = 13/124 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   + +   + D + I+SEK    + VV  G+KL G++TEG I +          
Sbjct: 6   RMTKNPICIDVNAKISDVVDIMSEKNLHRIPVV-SGKKLVGLVTEGMISKKGASKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+  SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+  
Sbjct: 65  IYELNYLLSKTSVDAIMIRDVITIHEDRFLEDAALLMFKHDIGCLPVVNDDNEVVGILTS 124

Query: 333 LDLL 336
            D+L
Sbjct: 125 NDVL 128



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             S        +  +     L DA  ++ +   GC+ VV++  ++ GI+T  D+  +F
Sbjct: 74  KTSVDAIMIRDVITIHEDRFLEDAALLMFKHDIGCLPVVNDDNEVVGILTSNDVLSSF 131


>gi|251772521|gb|EES53087.1| putative signal-transduction protein with CBS domains
           [Leptospirillum ferrodiazotrophum]
          Length = 137

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 4/121 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH 277
             S       +   V++     +   I+  K+ G + V+ +G K  GIITE D+  R   
Sbjct: 1   MVSVKKIMTKNPISVEMTTTAREVAEIMKSKKVGSLLVL-QGDKTVGIITETDLVRRVLG 59

Query: 278 KDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +D          VM      I  D  +  A  ++ +H+I  L+VVD+ +  +G++   DL
Sbjct: 60  EDRIPYITPCSQVMSAPVLTISPDASVYEAQDMMDKHHIRHLLVVDEEEAVLGLISIRDL 119

Query: 336 L 336
           +
Sbjct: 120 I 120



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           SV+ +M KNP  +   T      ++++   +  L+V+    K +GI+   DL+R
Sbjct: 3   SVKKIMTKNPISVEMTTTAREVAEIMKSKKVGSLLVL-QGDKTVGIITETDLVR 55


>gi|291615020|ref|YP_003525177.1| diguanylate cyclase with PAS/PAC sensor [Sideroxydans
           lithotrophicus ES-1]
 gi|291585132|gb|ADE12790.1| diguanylate cyclase with PAS/PAC sensor [Sideroxydans
           lithotrophicus ES-1]
          Length = 961

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 3/121 (2%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  +  S+  +     L+ A+ ++  +R  CV VV E ++  GI+TE D+ R + +
Sbjct: 134 RRQVMTVAQRSVTSLPPHSSLMQALNLMQAQRESCVVVV-EDERPIGIVTERDVVRFYSR 192

Query: 279 DLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   + V   +VM      I  D  +  A +L+    +  L++VD   +  G+V   DL 
Sbjct: 193 EPAQVGVHLAEVMTSPVLTIRSDATINEAAELMLARKVRHLVLVDSAGRMAGLVSEHDLT 252

Query: 337 R 337
           +
Sbjct: 253 Q 253



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 1/100 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPK 294
              + +A  I++++RF  + ++DE     GI+TE +I             +   M     
Sbjct: 22  DSTIGEAALIMAQRRFSSIVIIDEAGHPVGIVTERNILHAMRASSPPDTQLRTSMSAPVV 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V+        A Q+  +  I  L++VDD     G+V   D
Sbjct: 82  VVPGKMDCLEAYQICMREGIRHLVLVDDDGVVAGVVSETD 121



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V      ++A  I   +    + +VD+   + G+++E D   + +  +     
Sbjct: 76  MSAPVVVVPGKMDCLEAYQICMREGIRHLVLVDDDGVVAGVVSETDFRLHLNLTVLAGR- 134

Query: 286 EDVMI---KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM    ++   +   + L  A+ L++    S ++VV+D  + IGIV   D++RF
Sbjct: 135 RQVMTVAQRSVTSLPPHSSLMQALNLMQAQRESCVVVVEDE-RPIGIVTERDVVRF 189



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 26/55 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + D+  +    +  D+ +  A  ++ Q   S ++++D+    +GIV   ++L  
Sbjct: 7   PLTDIATRAVTCLAVDSTIGEAALIMAQRRFSSIVIIDEAGHPVGIVTERNILHA 61



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/147 (11%), Positives = 45/147 (30%), Gaps = 8/147 (5%)

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R  + L  +    + +      +    P         L         + + D   I ++ 
Sbjct: 123 RLHLNLTVLAGRRQVMTVAQRSVTSLPPHSSLMQALNLMQAQRESCVVVVEDERPIGIVT 182

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            R+     FY   P                    +  ++    + +A  ++  ++   + 
Sbjct: 183 ERDVVR--FYSREPAQVG------VHLAEVMTSPVLTIRSDATINEAAELMLARKVRHLV 234

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +VD   ++ G+++E D+ +     L  
Sbjct: 235 LVDSAGRMAGLVSEHDLTQTMASGLME 261


>gi|253575757|ref|ZP_04853092.1| CBS domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251844800|gb|EES72813.1| CBS domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 141

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 50/120 (41%), Gaps = 3/120 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRN 275
           +          ++  V     + +    + E   G + VV+ G KL G+IT+ D+     
Sbjct: 1   MLRKVSEIMTQNVVTVTPQDNVYEVAVKMKEHDTGFIPVVEGGDKLIGVITDRDLVIRGI 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K   + +V +VM K  K    D  +  A +L+ +  I  L V  +  + IGIV   DL
Sbjct: 61  AEKRPGSTAVSEVMTKGIKTASRDMSVDEAAELMAEQQIRRLPVC-EGDRLIGIVSLGDL 119



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V ++M +N   +     +      +++H+   + VV+   K IG++   DL+  GI
Sbjct: 4   KVSEIMTQNVVTVTPQDNVYEVAVKMKEHDTGFIPVVEGGDKLIGVITDRDLVIRGI 60


>gi|223984820|ref|ZP_03634929.1| hypothetical protein HOLDEFILI_02227 [Holdemania filiformis DSM
           12042]
 gi|223963194|gb|EEF67597.1| hypothetical protein HOLDEFILI_02227 [Holdemania filiformis DSM
           12042]
          Length = 148

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   ++    +  A+ +++E+ F  + VVD GQ+L G++TEG I  N         
Sbjct: 6   RMTANPYCIRKDTSISAALDLMAERDFHRIPVVD-GQELVGLVTEGTIAENTPSKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L   +VE VMIK+   I  D LL  A  L+RQH+I  L VV + +K +GI+  
Sbjct: 65  VYELNYLLAKSTVESVMIKDVVTIHPDALLEEAAVLMRQHDIGCL-VVTEGRKVVGIITQ 123

Query: 333 LDLLRF 338
            D+   
Sbjct: 124 NDIFEA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/47 (34%), Positives = 28/47 (59%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+D M  NP  I +DT ++ A+ L+ + +   + VVD  Q+ +G+V 
Sbjct: 3   VKDRMTANPYCIRKDTSISAALDLMAERDFHRIPVVD-GQELVGLVT 48



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  +     L +A  ++ +   GC+ VV EG+K+ GIIT+ DIF  F
Sbjct: 81  MIKDVVTIHPDALLEEAAVLMRQHDIGCL-VVTEGRKVVGIITQNDIFEAF 130


>gi|149925239|ref|ZP_01913526.1| inosine-5'-monophosphate dehydrogenase [Plesiocystis pacifica
           SIR-1]
 gi|149813889|gb|EDM73548.1| inosine-5'-monophosphate dehydrogenase [Plesiocystis pacifica
           SIR-1]
          Length = 493

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 63/156 (40%), Gaps = 9/156 (5%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
              A+ +A +        +  +     ++  +    + ++    +   +  G  L  A+ 
Sbjct: 59  AETAIGMARMGGIGIVHKNLSIEQQAREIRKVKKSETGMVADPLT---INPGSTLRAALE 115

Query: 245 ILSEKRFGCVAVVDEGQKL---KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           ++    F  + VV+   +     GI+T  DI   F  +L+   V DVM K      +   
Sbjct: 116 LMETHGFSGLPVVENPGQPGPPVGILTSRDIR--FETNLDQ-KVNDVMTKKVITAPQGID 172

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              A  +L QH I  L+VVDD    +G++   D+L+
Sbjct: 173 PDEAKSILHQHRIEKLLVVDDRGHLLGLITVKDILK 208


>gi|145635128|ref|ZP_01790833.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           PittAA]
 gi|229844927|ref|ZP_04465064.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           6P18H1]
 gi|145267549|gb|EDK07548.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           PittAA]
 gi|229812061|gb|EEP47753.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           6P18H1]
          Length = 488

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDGENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++VV+D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKA 205



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V VV++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVVNDSFKLKGMITVKDFQKAEQK 208


>gi|110632828|ref|YP_673036.1| inositol-5-monophosphate dehydrogenase [Mesorhizobium sp. BNC1]
 gi|110283812|gb|ABG61871.1| inosine-5'-monophosphate dehydrogenase [Chelativorans sp. BNC1]
          Length = 500

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNLTPAEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA  ++   R   + VV+ G        KL GI+T  D+    +       V
Sbjct: 105 IGPDATLADAHALMGAHRISGIPVVENGGLGGHTVGKLVGILTNRDVRFASNP---AQPV 161

Query: 286 EDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M  +    + E      A +LL Q+ I  L+VVDD    +G++   D+
Sbjct: 162 RELMTHDRLITVKESVSQEEAKRLLHQNRIEKLLVVDDAGNCVGLITVKDI 212


>gi|320160660|ref|YP_004173884.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
 gi|319994513|dbj|BAJ63284.1| hypothetical protein ANT_12500 [Anaerolinea thermophila UNI-1]
          Length = 275

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     ++DA  +L  ++   + VV    KL GI+T   + R           
Sbjct: 10  MSSPVYTVTPETFIVDARRLLDVRKIRHLPVV-SAGKLVGIVTRRGLLRADLPAVSDETW 68

Query: 276 -FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               DL+  ++ D+M  NP  +  +T +  A +++ ++ I+ L V++D ++ +GI+   D
Sbjct: 69  EIAFDLHHQTIRDIMTVNPITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSD 128

Query: 335 LLRF 338
           + RF
Sbjct: 129 IFRF 132



 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LS 284
              +   V    P+  A  ++ E +   + V+++ ++L GI+T  DIFR   ++L   L 
Sbjct: 83  MTVNPITVFPNTPMPKAARVMLENKITGLPVLNDQRELVGILTSSDIFRFIIEELEEPLV 142

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M +   V+  DT L  A +L+    I  L V+++  + +G+V   DL+
Sbjct: 143 VAEYMSEEVVVVEPDTSLLEAHRLMGTKRIRALPVLEED-RLVGLVTRTDLV 193



 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/151 (21%), Positives = 63/151 (41%), Gaps = 18/151 (11%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            + +D +       +  L        +  + + +V+    L++A  ++  KR   + V++
Sbjct: 124 LTSSDIFRF----IIEELEEPLVVAEYMSEEVVVVEPDTSLLEAHRLMGTKRIRALPVLE 179

Query: 259 EGQKLKGIITEGDIF------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           E  +L G++T  D+             +     + T  VE +M +    +   T L  A 
Sbjct: 180 ED-RLVGLVTRTDLVSSDPSRFISRKQQELSLKILTQPVEGIMTRTLVTVSPQTTLKEAA 238

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +LL +  I  L VV++  K +GI+   DL R
Sbjct: 239 RLLLEKKIHSLPVVENS-KLVGILTESDLFR 268



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M      +  +T +  A +LL    I  L VV    K +GIV    LLR 
Sbjct: 6   VKNWMSSPVYTVTPETFIVDARRLLDVRKIRHLPVV-SAGKLVGIVTRRGLLRA 58



 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           ++     +L    +          ++  V     L +A  +L EK+   + VV E  KL 
Sbjct: 200 FISRKQQELSLKILTQPVEGIMTRTLVTVSPQTTLKEAARLLLEKKIHSLPVV-ENSKLV 258

Query: 265 GIITEGDIFRNFHKDLN 281
           GI+TE D+FR   +   
Sbjct: 259 GILTESDLFRMVVQKFF 275


>gi|15678875|ref|NP_275992.1| inosine-5'-monophosphate dehydrogenase related protein VIII
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2621947|gb|AAB85353.1| inosine-5'-monophosphate dehydrogenase related protein VIII
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 514

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 60/160 (37%), Gaps = 11/160 (6%)

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI---------PLVKIGCP 238
           AL IA          DF +  P  +L +        +     +          +      
Sbjct: 346 ALKIAEELKSWIERGDFLLTEPVKRLPSRSATRPLEIRRPSIMVRELESKPVIITHQEDD 405

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D    + +     + VVD    L+GI+T  DI     +    L   D+M +   V  E
Sbjct: 406 LKDVARKMVDNNINHIPVVDSEGVLRGIVTSWDIADAVARGKRKL--RDIMTRKVVVARE 463

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  + V  + + ++NIS L +VDD  +  GIV   D+ R 
Sbjct: 464 NEPVDVVARRIDKYNISGLPIVDDENRVKGIVTAEDISRL 503



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               + + +   P+      + +     + +VD+  ++KGI+T  DI R   K
Sbjct: 454 MTRKVVVARENEPVDVVARRIDKYNISGLPIVDDENRVKGIVTAEDISRLIGK 506


>gi|126275953|ref|XP_001386928.1| CBS domain-containing protein [Scheffersomyces stipitis CBS 6054]
 gi|126212797|gb|EAZ62905.1| CBS domain-containing protein [Pichia stipitis CBS 6054]
          Length = 609

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 63/143 (44%), Gaps = 9/143 (6%)

Query: 201 ENDFYVLHPGGKLGTLFVCAS---DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           END      GG   +    A+    +        + K    + +   +++ +R  CV VV
Sbjct: 45  ENDLNKKKRGGTRTSRNRRAAPGTVLSLKPTDPIICKTSSTVYEVSQLMTARRENCVLVV 104

Query: 258 DEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           ++  +L GI T  D+         + N+++++ +M  NP+    +   + A+ L+ +   
Sbjct: 105 NDVGELLGIFTAKDLAFRVVGSSLNANSVTIDQIMTPNPQCANANAAASEALTLMVERGF 164

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L V+DD  + +G++   D+ +
Sbjct: 165 RHLPVLDDNNQIVGVL---DITK 184



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 3/97 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNP 293
             + +A  ++ E R   V V D   ++ GI T  D+  R     L+    S+  VM   P
Sbjct: 256 STVYEATVLMKENRTTAVLVKDNNDEVTGIFTSKDVVLRVIAAGLDPKNCSIVRVMTPQP 315

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            V   +  +  A++ + + +   L VV D    IGIV
Sbjct: 316 DVAKVNLPIQQALRQMFEGHYLNLPVVGDQNDIIGIV 352


>gi|312865774|ref|ZP_07725996.1| inosine-5'-monophosphate dehydrogenase [Streptococcus downei F0415]
 gi|311098649|gb|EFQ56871.1| inosine-5'-monophosphate dehydrogenase [Streptococcus downei F0415]
          Length = 493

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESGMAIAMARAGGLG-----VIHKNMSIKAQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPDRTIKEADELMGRYRISGVPIVETMENRKLVGIITNRDMR--FISDYNQA-IS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M   N       T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 157 THMTGANLVTAPVGTDLKTAESILHEHRIEKLPLVDENGRLSGLITIKDI 206


>gi|87121438|ref|ZP_01077327.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
 gi|86163281|gb|EAQ64557.1| hypothetical protein MED121_21440 [Marinomonas sp. MED121]
          Length = 622

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 6/131 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +  +      ++        ++    +  A   +++KR   + +  E + L GI+T+
Sbjct: 147 SQDVSLMTCPVKSLLRRPPIS--IEEDVSIQQAAQRMADKRVSSLLITHEDE-LVGIVTD 203

Query: 270 GDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+  R   K L+    V  +M K+P  I      + A+  +   N+  L +     KAI
Sbjct: 204 RDLRTRVIAKGLSYDEPVNVIMTKDPITIDSGDFASEAVMKMMAQNVHHLPIT-KNGKAI 262

Query: 328 GIVHFLDLLRF 338
           G++   D+++ 
Sbjct: 263 GVISSGDIVQK 273


>gi|77407721|ref|ZP_00784476.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           COH1]
 gi|77173720|gb|EAO76834.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           COH1]
          Length = 493

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         ++H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----IIHKNMSIVDQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D   L + 
Sbjct: 100 DPFFLTPDNTVSEAEELMQNYRISGVPIVETLENRKLVGIITNRDMR--FISDYKQL-IS 156

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M   N       T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSQNLVTAPIGTDLETAERILHEHRIEKLPLVDDEGRLSGLITIKDI 206


>gi|304314353|ref|YP_003849500.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
           marburgensis str. Marburg]
 gi|302587812|gb|ADL58187.1| inosine-5'-monophosphate dehydrogenase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 493

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+ +          V+H    +         V  SGD    
Sbjct: 45  KIPIISSAMDTVTEYEMAIAMAQEGG-----MGVIHRNMSIKDQVEQVKKVKRSGDLTIR 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  I+ ++    + VV E   L GII+  DI   F+ + +   V+ V
Sbjct: 100 DVITISPDSTLREAHEIMDQEEISGLPVV-EDGILIGIISRRDIEPIFNSEADR-KVDQV 157

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++   + E    + A+ +  ++ +  L VV    K +GI+   D+L
Sbjct: 158 MTRDVVTVDESVTPSEALDIAYENKVERLPVV-KDGKIVGILTMKDIL 204


>gi|255326897|ref|ZP_05367973.1| inosine-5'-monophosphate dehydrogenase [Rothia mucilaginosa ATCC
           25296]
 gi|255296114|gb|EET75455.1| inosine-5'-monophosphate dehydrogenase [Rothia mucilaginosa ATCC
           25296]
          Length = 505

 Score = 89.6 bits (221), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            V+H    +         V  S   + +
Sbjct: 49  NTPIISAAMDTVTDSAMAIAMARLGG-----MGVIHRNLSIEDQAAHVDRVKRSESGMII 103

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   +    +   + VV E   L+GIIT  DI      D   + V D+
Sbjct: 104 NPVTIGADATIAEYDEVCGYYKVSGLPVVSEEGVLEGIITNRDIRYISRSDYEGIRVRDI 163

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P            A  LL  + I  L +VDD  K  G++   D ++
Sbjct: 164 MTPMPLVTAHPSVTKDEAFALLSNNKIERLPLVDDAGKLAGLITLKDFVK 213


>gi|319781091|ref|YP_004140567.1| sugar isomerase (SIS) [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
 gi|317166979|gb|ADV10517.1| sugar isomerase (SIS) [Mesorhizobium ciceri biovar biserrulae
           WSM1271]
          Length = 291

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 73/192 (38%), Gaps = 6/192 (3%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           +S   +          +S+ +   +      + L    + L  E    F  A E +   K
Sbjct: 81  YSRLPTAEMHQELSSDDSSAEIVQKVFRTSIQALEETLAILDIE---DFDRAAELLFRAK 137

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R    G+G S  I   ++      G  +     +        ++  DD+ +  S SG++
Sbjct: 138 NR-DFYGVGGSAQIARDVSHKFLRIGIRASVYDDSHMMLMSASLLGGDDIAVGFSHSGNT 196

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
             +   +  AR+     +AIT+ + S +A  ADIVL    +        A   + I QL 
Sbjct: 197 SAVIDAIQLARKNGARTLAITNYDNSPLAAVADIVLCSTAQGSPLMGENA--AARIAQLN 254

Query: 185 IGDALAIALLES 196
           I DAL +A+ + 
Sbjct: 255 ILDALFVAVAQR 266


>gi|294786665|ref|ZP_06751919.1| inosine-5'-monophosphate dehydrogenase [Parascardovia denticolens
           F0305]
 gi|315226269|ref|ZP_07868057.1| inosine-5'-monophosphate dehydrogenase [Parascardovia denticolens
           DSM 10105]
 gi|294485498|gb|EFG33132.1| inosine-5'-monophosphate dehydrogenase [Parascardovia denticolens
           F0305]
 gi|315120401|gb|EFT83533.1| inosine-5'-monophosphate dehydrogenase [Parascardovia denticolens
           DSM 10105]
          Length = 514

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 47/209 (22%), Positives = 72/209 (34%), Gaps = 23/209 (11%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIAL 193
                +    D VL LP E +  P                AP  SA M       +AIA+
Sbjct: 17  SPFQKLGLAYDDVLLLPNESDVIPSEVDTTSRLTRNITMKAPVLSAAMDTVTESDMAIAM 76

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEK 249
             +         VLH    +         V  S   +            L +   +    
Sbjct: 77  ARNGGIG-----VLHRNLSIEDQANQVDLVKRSESGMITDPLTIGPDATLAELDKLCGTY 131

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQL 308
               + V+D  ++L GIIT  D+     +D + L V DVM K N      D     A +L
Sbjct: 132 HVSGLPVIDADRRLLGIITNRDMRFIDPEDYDRLRVSDVMTKENLITGPADISKDDAHRL 191

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L Q+ I  L ++D   +  G++   D ++
Sbjct: 192 LAQNKIEKLPLLDKDGRLAGLITVKDFVK 220


>gi|261855250|ref|YP_003262533.1| nucleotidyl transferase [Halothiobacillus neapolitanus c2]
 gi|261835719|gb|ACX95486.1| Nucleotidyl transferase [Halothiobacillus neapolitanus c2]
          Length = 353

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           ++   L  AI ++ +       V+D+  +L G +T+GDI R   + L+    V +VM   
Sbjct: 11  RVSDSLHRAIEVIDQGAKQIALVLDDDGRLIGTVTDGDIRRGILRHLSLEAPVSEVMNAK 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P+ +        A+QLL    +  + +VD   K +G+    DL++
Sbjct: 71  PRSLAAGYSRAEALQLLGSAQVLQVPIVDRDGKLVGLETMTDLMK 115


>gi|254167299|ref|ZP_04874151.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|197623562|gb|EDY36125.1| SIS domain protein [Aciduliprofundum boonei T469]
          Length = 178

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 6/171 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S+E SL        +  V+ I   K ++ + G G+SG +G   A  L   G  ++F+ 
Sbjct: 10  LESIEKSLNAIDVSLVNQGVDMITEAK-QIFVYGSGRSGLVGKFFAMRLVQLGLVAYFIG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++ + DL++++S +G +     +    +R    +IAITS  KS +A HAD
Sbjct: 69  ETITP-----VVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAKSPLAKHAD 123

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +   +  E E        T      +   D++  +L+     +E D    H
Sbjct: 124 LTFVIRYEKEKGELAPLGTLFEDAAVVFLDSIISSLMNKLGQTEEDMRRRH 174


>gi|21225862|ref|NP_631641.1| transcriptional regulator [Streptomyces coelicolor A3(2)]
 gi|11228498|emb|CAC16520.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
          Length = 311

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 6/168 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + I  E R L    ++L  +       AV+ +   + RV I G+G S  +G  L   L  
Sbjct: 123 KIIYNEVRALEDSGAALDVD---ALGRAVDAVAKAR-RVDIFGVGASAFVGQDLHQKLHR 178

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +F      A+     ++   D+ + +S SG +++    L  A       IA+T++ 
Sbjct: 179 IGRMAFIWSDRHAALTATALLGPGDVALAVSHSGETEDTTEPLQAAAERGATTIALTNDP 238

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            S +A  AD+VLT        P     T S I QLA+ D L + + + 
Sbjct: 239 GSTLATGADLVLTT--CARETPFRSGATVSRIAQLAVIDCLFVGVAQR 284


>gi|332976772|gb|EGK13603.1| RpiR family transcriptional regulator [Desmospora sp. 8437]
          Length = 293

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 76/179 (42%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+S      + +   K  +  L SSL  +   +   AV  +K  + RV+  G+G S    
Sbjct: 102 KDSPYDLFQKVVHVNKGAIELLASSLDKK---ELERAVNVLKEAR-RVLFFGVGGSAIAA 157

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  + F H        +  +   D+ + +S SG + ++  ++ +A++   
Sbjct: 158 VDSLYKFTKLGFQTEFNHDFHYMLSLITHLNEKDVFVAISMSGKTKDVMDLVQFAKKKGA 217

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT+ +KS +   ADI L  P   +    G    TS + QL + D L I+L  +  
Sbjct: 218 TVIAITNISKSPLYKQADIRLATPTVEKDFRSGSI--TSRMTQLTVIDTLYISLFNTIG 274


>gi|219851795|ref|YP_002466227.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
 gi|219546054|gb|ACL16504.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
          Length = 496

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                P ++ G         L  K    + V+    +L GI+T  DI     K+   L  
Sbjct: 380 MIRDFPTIEEGATTAVTARRLVNKEVNHLPVLSRSDRLVGIVTSWDIANAVAKNFLWL-- 437

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +++M KN      D  +  A + + +H+IS L VVD  Q  IG++ 
Sbjct: 438 DEIMSKNVITTAPDEPIESAAKKMEEHSISALPVVDADQHLIGLIT 483



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 29/69 (42%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G I     + L+   V DVMI++   I E     V  + L    ++ L V+    + +GI
Sbjct: 361 GQINYLISQFLSRTVVGDVMIRDFPTIEEGATTAVTARRLVNKEVNHLPVLSRSDRLVGI 420

Query: 330 VHFLDLLRF 338
           V   D+   
Sbjct: 421 VTSWDIANA 429


>gi|209517538|ref|ZP_03266378.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
 gi|209502071|gb|EEA02087.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
          Length = 281

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 7/172 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +      L  + ++L    S     A++ +   K R+   G G SG     +    
Sbjct: 94  AAKVLDRTIGALIQVRNNLS---SDSVAAAIDILARAK-RIEFYGAGGSGIAALDVQHKF 149

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G PS              ++   D+++ +S +G + ++   +  A      +IAIT 
Sbjct: 150 FRLGMPSVAYSDPHTFLMSAALLGEGDVVVAISNTGRTRDIIDAVKAALNAGAKVIAIT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              S +A  A + L    + ++     +P TS +  LAIGD LA+ +  SR 
Sbjct: 209 HGNSPLARLATVGLFANVDEDTDIF--SPMTSRVSHLAIGDILAVGVALSRG 258


>gi|322372269|ref|ZP_08046810.1| CBS domain containing membrane protein [Haladaptatus
           paucihalophilus DX253]
 gi|320548278|gb|EFW89951.1| CBS domain containing membrane protein [Haladaptatus
           paucihalophilus DX253]
          Length = 380

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 1/128 (0%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               L +     + V       P V     + D    L E       V  E  +L GII 
Sbjct: 49  QKQLLQSHIEDQTKVATLTKPAPKVNRTDDVRDVARALVEGGTKVAPVF-EDGQLWGIID 107

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           E  I     ++L+ L+V+ +  +NP  I ED  L   + L+R+H+IS L VV++     G
Sbjct: 108 EDIILEGVLENLDALTVQQIYTENPVTIPEDATLGRVINLMREHSISRLPVVNENGYLTG 167

Query: 329 IVHFLDLL 336
           +V   D++
Sbjct: 168 MVTTHDIV 175



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHK---- 278
            ++   +     L   I ++ E     + VV+E   L G++T  DI     RN  K    
Sbjct: 129 TENPVTIPEDATLGRVINLMREHSISRLPVVNENGYLTGMVTTHDIVDFVTRNMDKPTTG 188

Query: 279 -------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGI 329
                   +  L V DVM    + I     +  A++ + + + + L+V   DD +   G+
Sbjct: 189 ERMGDSDRMLDLPVYDVMNNPVETISLTDTVEDAVERMFEKDYAGLVVTAEDDDRVVGGV 248

Query: 330 VHFLDLLRF 338
           +   D+LR 
Sbjct: 249 LTKTDVLRA 257


>gi|229917121|ref|YP_002885767.1| RpiR family transcriptional regulator [Exiguobacterium sp. AT1b]
 gi|229468550|gb|ACQ70322.1| transcriptional regulator, RpiR family [Exiguobacterium sp. AT1b]
          Length = 301

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 74/179 (41%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K++      + I   K  + +   ++      +   AV+ + A   RV+  G+G S    
Sbjct: 110 KDTPYDSFQKVIHVNKAAIEACAEAMDKR---ELEHAVD-LFARASRVIFYGVGGSSTAA 165

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  +            +  + + D+ + +S SG + ++  ++ +A++  +
Sbjct: 166 IDAQYKFTKLGYAATTSPDFHYMLSLIPHLGKSDVFVAISTSGRTKDVLELVRFAKKKRV 225

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           P+IAIT+ +KS +   AD+ L  P         +A   S + QL I D L + LL  + 
Sbjct: 226 PVIAITNLDKSPLYREADVRLCTPNVESDFR--IASIASRMTQLTIIDTLYMGLLHRKG 282


>gi|99078638|ref|YP_611896.1| cyclic nucleotide-binding protein [Ruegeria sp. TM1040]
 gi|99035776|gb|ABF62634.1| cyclic nucleotide-binding protein [Ruegeria sp. TM1040]
          Length = 606

 Score = 89.2 bits (220), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P  + G      +       +        P+ DA  ++       + + D     
Sbjct: 125 FDRRRPPPRTGNSLASLTVEQLMTRAPVTCTPETPIRDAAALMHRHHISSICICDPDG-F 183

Query: 264 KGIITEGDI-FRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+  +     ++ L  +  +M ++   +    L+T  + L+ + NI  + +V+
Sbjct: 184 HGIVTLRDLNSKVIVGGIDPLEPISGIMTEDVLTLAPQALVTDVLHLMVERNIHHVPIVN 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +    +GIV   DL R 
Sbjct: 244 ERG-LLGIVTQTDLTRA 259


>gi|302798198|ref|XP_002980859.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
 gi|300151398|gb|EFJ18044.1| hypothetical protein SELMODRAFT_32029 [Selaginella moellendorffii]
          Length = 427

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDV 288
           +++    + DA   ++  R   V + D    L GI T+ D+  R   K L      V  V
Sbjct: 15  IIRDSSSVADACRRMAAARIDAVLLTDSDSVLCGIFTDKDVVARVIAKGLKPEETCVSSV 74

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +NP  I  D L   A++ + +     L VVD+  + I +V+    L
Sbjct: 75  MTRNPVYIPSDALADHALRKMIRGKFRHLPVVDN-GQVIALVNMKKCL 121



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVM 289
           +     +  A   + E       +V  G+   GI T  D+  R   K L   + ++E VM
Sbjct: 183 ICPNETVDTATKKMLEFSSD-YVIVASGRNPVGIFTSKDLLMRVVAKGLCPTSTAIEKVM 241

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +N +    DT +  A+ ++       L ++D  +  +G V  + L+  G+
Sbjct: 242 TRNVECASLDTAVVDALHIMHDGRFCHLPILDQDRNVVGCVSVMALVECGL 292


>gi|22538293|ref|NP_689144.1| inosine 5'-monophosphate dehydrogenase [Streptococcus agalactiae
           2603V/R]
 gi|25012153|ref|NP_736548.1| inosine 5'-monophosphate dehydrogenase [Streptococcus agalactiae
           NEM316]
 gi|76787891|ref|YP_330707.1| inosine 5'-monophosphate dehydrogenase [Streptococcus agalactiae
           A909]
 gi|76798669|ref|ZP_00780893.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           18RS21]
 gi|77411771|ref|ZP_00788107.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           CJB111]
 gi|77413653|ref|ZP_00789838.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           515]
 gi|22535208|gb|AAN01017.1|AE014289_17 inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           2603V/R]
 gi|24413697|emb|CAD47777.1| unknown [Streptococcus agalactiae NEM316]
 gi|76562948|gb|ABA45532.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           A909]
 gi|76585979|gb|EAO62513.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           18RS21]
 gi|77160308|gb|EAO71434.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           515]
 gi|77162162|gb|EAO73137.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           CJB111]
 gi|319746202|gb|EFV98472.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           ATCC 13813]
          Length = 493

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         ++H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----IIHKNMSIVDQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D   L + 
Sbjct: 100 DPFFLTPDNTVSEAEELMQNYRISGVPIVETLENRKLVGIITNRDMR--FISDYKQL-IS 156

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M   N       T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSQNLVTAPIGTDLETAERILHEHRIEKLPLVDDEGRLSGLITIKDI 206


>gi|255022397|ref|ZP_05294383.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-208]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|157694345|ref|YP_001488807.1| transcriptional regulator [Bacillus pumilus SAFR-032]
 gi|157683103|gb|ABV64247.1| possible RpiR family transcriptional regulator [Bacillus pumilus
           SAFR-032]
          Length = 285

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S+L+ S Q         A++ I   K R+   G G SG I +        TG       
Sbjct: 109 ISALKDSFQLLNPEDVEKAIQIIHEAK-RLEFYGSGGSGLIATDAFHKFMRTGINCIVHT 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +       G++ +   +I +S SG + +L   +  A+      I ITS  +S ++  AD
Sbjct: 168 DSHFQAMSAGLLDQHSTVIGISHSGRNKDLLDAMKTAKSKGAKTIGITSYQRSPLSQLAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           + L    +  +        ++ + QL + D L  AL   R
Sbjct: 228 VTLYTATQETAFRTEA--MSARLAQLTVIDVLYFALAHLR 265


>gi|148254245|ref|YP_001238830.1| hypothetical protein BBta_2791 [Bradyrhizobium sp. BTAi1]
 gi|146406418|gb|ABQ34924.1| hypothetical protein BBta_2791 [Bradyrhizobium sp. BTAi1]
          Length = 141

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 52/125 (41%), Gaps = 11/125 (8%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------ 277
            +   ++  V     + +   +     F    VV E  ++ GI+T+ DI R F       
Sbjct: 11  TYMTRNVTTVTRDTTIRELSDMFDRDDFNTYPVV-ENDEVIGIVTKFDILRCFAFTPNQM 69

Query: 278 ----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                DL   +V  VM      +  DT LT  +QL+ +H I  L V D   + +GIV   
Sbjct: 70  LPRYSDLMDRTVATVMTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGNNRLVGIVARE 129

Query: 334 DLLRF 338
           D++R 
Sbjct: 130 DIVRA 134



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 19/53 (35%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                  V+    L   + ++ E R   + V D   +L GI+   DI R    
Sbjct: 85  MTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGNNRLVGIVAREDIVRALAA 137



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    M +N   +  DT +     +  + + +   VV++ +  IGIV   D+LR
Sbjct: 8   TAGTYMTRNVTTVTRDTTIRELSDMFDRDDFNTYPVVENDE-VIGIVTKFDILR 60


>gi|28379869|ref|NP_786761.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254558010|ref|YP_003064427.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|308182085|ref|YP_003926213.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|28272710|emb|CAD65639.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254046937|gb|ACT63730.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|308047576|gb|ADO00120.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 273

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 66/153 (43%), Gaps = 3/153 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  + +       H AV  I   + RV + G+G SG+   ++   L   G  +F +    
Sbjct: 99  LSGTWERLSPDDLHAAVNLISKAR-RVYLYGLGSSGYTAQEMTQRLIRMGIAAFSMTDTH 157

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +   G++   D+I+ +S +G++ E+   +  A++    +IAITS+ +S +A  +D+ +
Sbjct: 158 IMYISGGIMQPGDIILAISLTGATAEVNDSVALAKKKQAKVIAITSDERSRLAELSDLTI 217

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
               +     +      S        D +A  L
Sbjct: 218 L--VKNSKFVNNSRFVNSQFAITYALDIIAAML 248


>gi|256811071|ref|YP_003128440.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256794271|gb|ACV24940.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 127

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L D I  +++     V VV +G+   GI+T+ D+ +++++     + E++M  N
Sbjct: 18  VSLDTKLSDIIKTMAKYDISSV-VVSDGETFWGIVTDTDVLKHYNE--LDKTAEEIMTTN 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
           P  +  +  L  A++++ +  I  L V      K +G++   D+++ 
Sbjct: 75  PITVSPEAPLEKAVRIMAEKGIHHLYVKSPCEDKIVGVISSKDIVKL 121



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V DVM K    +  DT L+  ++ + +++IS  +VV D +   GIV   D+L+
Sbjct: 7   VRDVMKKGVVEVSLDTKLSDIIKTMAKYDISS-VVVSDGETFWGIVTDTDVLK 58


>gi|212640085|ref|YP_002316605.1| multidomain-containing protein (contains CAP-ED, 2CBS and a
           putative nucleotidyltransferase domains) [Anoxybacillus
           flavithermus WK1]
 gi|212561565|gb|ACJ34620.1| Multidomain protein (contains CAP-ED, 2CBS and a predicted
           nucleotidyltransferase domains) [Anoxybacillus
           flavithermus WK1]
          Length = 611

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 55/141 (39%), Gaps = 6/141 (4%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                     G   +  V   DVM     +  +     + +A   ++      + V DE 
Sbjct: 139 AEQIKQARKFGDATSFVVPVQDVM--IRDVVTLPPTATVQEAAKKMAATHISSIVVTDEQ 196

Query: 261 QKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             L GI+TE D+  R   + L     VE VM K+   I        A+ L+ +  +  L 
Sbjct: 197 -TLCGILTETDLVERVLGQSLPYDTVVERVMTKDVATISRFAYYYDALALMIERGVKHLP 255

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VVDD  K  GIV F DL+R  
Sbjct: 256 VVDD-GKVQGIVTFSDLMRKK 275


>gi|297619452|ref|YP_003707557.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297378429|gb|ADI36584.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 412

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V     +IDA   +         V +    L GIIT+ DI       + L  +SV+ +M 
Sbjct: 73  VLEDATVIDACFDIVNSGQRVAPVYNSKNNLSGIITDYDIIEAVSTSELLKDVSVDMLMT 132

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           KNP  I +D  +  A  L+ ++ I  L+V+D+  +  GI+   D+++
Sbjct: 133 KNPITIDKDENVGKAKNLMSKYGIGRLIVLDEEGEPEGIITEDDIIK 179



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 56/134 (41%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S  M    +   +     +  A  ++S+   G + V+DE  + +GIITE DI +  +K 
Sbjct: 125 VSVDMLMTKNPITIDKDENVGKAKNLMSKYGIGRLIVLDEEGEPEGIITEDDIIKRIYKP 184

Query: 280 LNTLSVEDV-------MIKNPKVILE--------DTLLTVAMQLLRQHNISVLMVVDDCQ 324
              +++ D+       M +    I+            +    ++L++++I  + V     
Sbjct: 185 KIKMTIGDIKGEKISRMSQPVSSIMSYPMVNVELTDSIPEVARVLKENDIRGMPVY-KNG 243

Query: 325 KAIGIVHFLDLLRF 338
              GI+   D+L++
Sbjct: 244 TLRGIITRYDILKY 257



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D+  K+  ++  +T ++ A+ ++  +    L+V  +    I +V+  DLL
Sbjct: 5   VKDISTKDVVIVTPETTVSKAISMMETNRFHNLLVEKEG--IIYLVNIHDLL 54



 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           S   + +V     +  AI+++   RF  + V  E     GII   +I      +  +  +
Sbjct: 9   STKDVVIVTPETTVSKAISMMETNRFHNLLVEKE-----GIIYLVNIHDLLLSNSVSQPI 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M K P  +LED  +  A   +      V  V +      GI+   D++  
Sbjct: 64  GDLMYK-PYGVLEDATVIDACFDIVNSGQRVAPVYNSKNNLSGIITDYDIIEA 115


>gi|255520062|ref|ZP_05387299.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-175]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|152973862|ref|YP_001373379.1| inositol-5-monophosphate dehydrogenase [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152022614|gb|ABS20384.1| inosine-5'-monophosphate dehydrogenase [Bacillus cytotoxicus NVH
           391-98]
          Length = 487

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S   +  
Sbjct: 43  NIPLISAGMDTVTEADMAIAMARQGGLG-----IIHKNMSIEQQAEQVDKVKRSESGVIS 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + DA  ++ + R   V +V+  + QKL GIIT  D+   F +D  ++ + 
Sbjct: 98  DPFFLTPEHQVYDAEHLMGKYRISGVPIVNNLDEQKLVGIITNRDMR--FIQD-YSIKIS 154

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM K         T L  A ++L+++ I  L +VD      G++   D+
Sbjct: 155 DVMTKEQLITAPVGTTLKEAEKILQKYKIEKLPLVDQNGVLKGLITIKDI 204


>gi|16801960|ref|NP_472228.1| hypothetical protein lin2901 [Listeria innocua Clip11262]
 gi|16804795|ref|NP_466280.1| hypothetical protein lmo2758 [Listeria monocytogenes EGD-e]
 gi|46908945|ref|YP_015334.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47092648|ref|ZP_00230435.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes str.
           4b H7858]
 gi|47095566|ref|ZP_00233174.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes str.
           1/2a F6854]
 gi|217966038|ref|YP_002351716.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes
           HCC23]
 gi|224498397|ref|ZP_03666746.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes
           Finland 1988]
 gi|224502834|ref|ZP_03671141.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-561]
 gi|226225310|ref|YP_002759417.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes
           Clip81459]
 gi|254824877|ref|ZP_05229878.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-194]
 gi|254827324|ref|ZP_05232011.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N3-165]
 gi|254830806|ref|ZP_05235461.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes 10403S]
 gi|254851938|ref|ZP_05241286.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-503]
 gi|254899785|ref|ZP_05259709.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes J0161]
 gi|254913010|ref|ZP_05263022.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes
           J2818]
 gi|254930969|ref|ZP_05264328.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes
           HPB2262]
 gi|254937391|ref|ZP_05269088.1| guaB [Listeria monocytogenes F6900]
 gi|254993753|ref|ZP_05275943.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-064]
 gi|255025479|ref|ZP_05297465.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-003]
 gi|255028478|ref|ZP_05300429.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes LO28]
 gi|284800356|ref|YP_003412221.1| hypothetical protein LM5578_0101 [Listeria monocytogenes 08-5578]
 gi|284993541|ref|YP_003415309.1| hypothetical protein LM5923_0101 [Listeria monocytogenes 08-5923]
 gi|300763483|ref|ZP_07073481.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N1-017]
 gi|16412258|emb|CAD00971.1| guaB [Listeria monocytogenes EGD-e]
 gi|16415442|emb|CAC98126.1| guaB [Listeria innocua Clip11262]
 gi|46882218|gb|AAT05511.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47015996|gb|EAL06921.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes str.
           1/2a F6854]
 gi|47018943|gb|EAL09689.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes str.
           4b H7858]
 gi|217335308|gb|ACK41102.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes
           HCC23]
 gi|225877772|emb|CAS06487.1| Putative inosine-monophosphate dehydrogenase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|258599705|gb|EEW13030.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N3-165]
 gi|258605235|gb|EEW17843.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-503]
 gi|258609997|gb|EEW22605.1| guaB [Listeria monocytogenes F6900]
 gi|284055918|gb|ADB66859.1| hypothetical protein LM5578_0101 [Listeria monocytogenes 08-5578]
 gi|284059008|gb|ADB69947.1| hypothetical protein LM5923_0101 [Listeria monocytogenes 08-5923]
 gi|293582515|gb|EFF94547.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes
           HPB2262]
 gi|293591013|gb|EFF99347.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes
           J2818]
 gi|293594117|gb|EFG01878.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-194]
 gi|300515760|gb|EFK42809.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N1-017]
 gi|307572349|emb|CAR85528.1| inosine-5-monophosphate dehydrogenase/GMP reductase [Listeria
           monocytogenes L99]
 gi|328468236|gb|EGF39242.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes
           1816]
 gi|328469104|gb|EGF40052.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes 220]
 gi|332313189|gb|EGJ26284.1| Inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes str.
           Scott A]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|225388029|ref|ZP_03757753.1| hypothetical protein CLOSTASPAR_01763 [Clostridium asparagiforme
           DSM 15981]
 gi|225045909|gb|EEG56155.1| hypothetical protein CLOSTASPAR_01763 [Clostridium asparagiforme
           DSM 15981]
          Length = 484

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDRVKRSENGVIS 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++S+ R   V V  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDANDLMSKFRISGVPVT-EGKKLVGIITNRDLK--FEEDFSR-PIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN     E   L  A  +L +  +  L +VDD     G++   D+
Sbjct: 152 MTSKNLVTAKEGVTLKEAKAILSKAKVEKLPIVDDDFNLKGLITIKDI 199


>gi|289436031|ref|YP_003465903.1| inosine-5'-monophosphate dehydrogenase [Listeria seeligeri serovar
           1/2b str. SLCC3954]
 gi|289172275|emb|CBH28821.1| inosine-5'-monophosphate dehydrogenase [Listeria seeligeri serovar
           1/2b str. SLCC3954]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   +    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDQHGRLLAAAAVGITNDTFVRVEKLVEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|57641121|ref|YP_183599.1| hypothetical protein TK1186 [Thermococcus kodakarensis KOD1]
 gi|57159445|dbj|BAD85375.1| hypothetical protein, conserved, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 391

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 33/150 (22%), Positives = 62/150 (41%), Gaps = 17/150 (11%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           ND  VL    +         + M     +  +K    +  A+ ++ +     + +V++  
Sbjct: 114 NDMAVLERVAQEKFGKGKVEEYM--TKDVITLKPSDTVAKALAVMRDHAISRIPIVNDEG 171

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVE---------------DVMIKNPKVILEDTLLTVAM 306
           KL+G++T  D+   F K                       DVMI+    IL D  +  A+
Sbjct: 172 KLEGLVTLHDLIIRFIKPRFRAQAGEVAGEKIPPFSMPLRDVMIRGVITILPDATVREAV 231

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ++ ++I  L+VV++  K +GI+   DLL
Sbjct: 232 ATMKDNDIDGLVVVNEDNKVVGILTVKDLL 261



 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE-GDIFRNF 276
              + V       P++K    L  A  ++ E     + V +   ++ G++ +   + R  
Sbjct: 64  PTKAKVRDVYKPAPVIKPDEDLSKAAKLMIEVDLRSLPVGESKAEIIGVVNDMAVLERVA 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      VE+ M K+   +     +  A+ ++R H IS + +V+D  K  G+V   DL+
Sbjct: 124 QEKFGKGKVEEYMTKDVITLKPSDTVAKALAVMRDHAISRIPIVNDEGKLEGLVTLHDLI 183


>gi|290891938|ref|ZP_06554935.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-071]
 gi|290558532|gb|EFD92049.1| inosine-5'-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-071]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|309810928|ref|ZP_07704728.1| inosine-5'-monophosphate dehydrogenase [Dermacoccus sp. Ellin185]
 gi|308435082|gb|EFP58914.1| inosine-5'-monophosphate dehydrogenase [Dermacoccus sp. Ellin185]
          Length = 508

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            VLH    +         V  +      
Sbjct: 52  NIPLVSAAMDTVTEARMAIAMAREGG-----MGVLHRNLSIEDQAYQVDLVKRTQTGRIT 106

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L +   I  + R   + VV E   L G+IT  D+      +  T  V DV
Sbjct: 107 NPVTIGPDKTLEELDAICGQYRVSGLPVVVEDDTLVGMITNRDLRFTPVAEWATTKVRDV 166

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P V    D     A  +LRQH    L +VDD  + + ++   D ++
Sbjct: 167 MTPQPLVTAPVDISNDDATAILRQHKRERLPLVDDDGRLVALITVKDFVK 216


>gi|296133143|ref|YP_003640390.1| Polynucleotide adenylyltransferase region [Thermincola sp. JR]
 gi|296031721|gb|ADG82489.1| Polynucleotide adenylyltransferase region [Thermincola potens JR]
          Length = 876

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   + +A  I+       + VVD G K+ GII+  D+ +  H  L    V
Sbjct: 314 MSAPVKTIPMQTTIEEAGKIMLRYGHTGMPVVD-GDKMVGIISRRDLDKARHHGLGHAPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +    + EDT L+    L+ ++NI  L VV D  K +GIV   D+L+
Sbjct: 373 KGFMSRKVITVNEDTPLSDIQHLMIENNIGRLPVVRDS-KLVGIVSRTDVLK 423



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 272 IFRNFHKDLNTLSVE-DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +    HK +   +V  DVM    K I   T +  A +++ ++  + + VVD   K +GI+
Sbjct: 296 LNEILHKKIKPEAVARDVMSAPVKTIPMQTTIEEAGKIMLRYGHTGMPVVDGD-KMVGII 354

Query: 331 HFLDLLRF 338
              DL + 
Sbjct: 355 SRRDLDKA 362



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V    PL D   ++ E   G + VV +  KL GI++  D+ +N H D
Sbjct: 376 MSRKVITVNEDTPLSDIQHLMIENNIGRLPVVRDS-KLVGIVSRTDVLKNLHGD 428


>gi|159905206|ref|YP_001548868.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C6]
 gi|159886699|gb|ABX01636.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C6]
          Length = 500

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            V+H    +         V  + + +  
Sbjct: 48  NIPIISAAMDTVSEKDLAIALARRGGI-----AVIHRNMTVEEQLKHIRAVKMAENLVIR 102

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    +++A  I+ E     + VV E + L GI+T  D+     K    ++VE V
Sbjct: 103 DVVTVEPSSTVLEAERIMYEYNVSGLPVVCENKTLVGILTTRDLKFVPDK---QVAVETV 159

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLR 337
           M K+   + EDT     +  L ++ I  L ++D   +  +G+V   D+L+
Sbjct: 160 MTKDVLHVHEDTPYEEILNRLYENKIERLPILDKNTRELLGMVTLRDILK 209


>gi|261377732|ref|ZP_05982305.1| transcriptional regulator HexR [Neisseria cinerea ATCC 14685]
 gi|269146015|gb|EEZ72433.1| transcriptional regulator HexR [Neisseria cinerea ATCC 14685]
          Length = 315

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 42/185 (22%), Positives = 75/185 (40%), Gaps = 14/185 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              S +    +  A  S++ E+R L             +   A+  +   + RV   G+G
Sbjct: 88  DDMSSVVEKVLGNAAASLLGERRFLKE----------SELENAIATLMHAR-RVEFYGVG 136

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG +           G  +              +++ +D++I +S +GSS EL   +  
Sbjct: 137 NSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSSEDVLIAISNTGSSIELLDAVSI 196

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +IA+T    S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 197 AKENGASIIALTRNE-SPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253

Query: 194 LESRN 198
                
Sbjct: 254 ALRLG 258


>gi|15675939|ref|NP_270113.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes M1
           GAS]
 gi|19747038|ref|NP_608174.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS8232]
 gi|50915221|ref|YP_061193.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10394]
 gi|71904552|ref|YP_281355.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS6180]
 gi|71911670|ref|YP_283220.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS5005]
 gi|94989498|ref|YP_597599.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS9429]
 gi|94991486|ref|YP_599586.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10270]
 gi|94993385|ref|YP_601484.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS2096]
 gi|139474626|ref|YP_001129342.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes str.
           Manfredo]
 gi|209560280|ref|YP_002286752.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           NZ131]
 gi|56748937|sp|Q5X9A3|IMDH_STRP6 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|56749984|sp|P68839|IMDH_STRP8 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|76363553|sp|P0C0H6|IMDH_STRPY RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|81170920|sp|P0C0H7|IMDH_STRP1 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|924848|gb|AAB03846.1| inosine monophosphate dehydrogenase [Streptococcus pyogenes]
 gi|13623179|gb|AAK34834.1| inosine monophosphate dehydrogenase [Streptococcus pyogenes M1 GAS]
 gi|19749298|gb|AAL98673.1| inosine monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS8232]
 gi|50904295|gb|AAT88010.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10394]
 gi|71803647|gb|AAX73000.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS6180]
 gi|71854452|gb|AAZ52475.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS5005]
 gi|94543006|gb|ABF33055.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS9429]
 gi|94544994|gb|ABF35042.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10270]
 gi|94546893|gb|ABF36940.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS2096]
 gi|134272873|emb|CAM31155.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes str.
           Manfredo]
 gi|209541481|gb|ACI62057.1| inosine monophosphate dehydrogenase [Streptococcus pyogenes NZ131]
          Length = 493

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M    G  +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTGSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 206


>gi|152978569|ref|YP_001344198.1| inositol-5-monophosphate dehydrogenase [Actinobacillus succinogenes
           130Z]
 gi|150840292|gb|ABR74263.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus succinogenes
           130Z]
          Length = 488

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTEAKLAIALAQEGGIGFIHKNMSIERQADRVRRVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    V+D+   L GIIT  D    F KDLN  +V +VM 
Sbjct: 99  VTVSPELSLGELAQLVKKNGFAGYPVIDQNDNLVGIITARDTR--FVKDLNK-TVAEVMT 155

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       + L+  H +  ++VVDD  K  G++   D  + 
Sbjct: 156 SKDKLVTVKEGAKREDIIALMHSHRVEKVLVVDDNFKLKGMITVKDFQKA 205



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 30/62 (48%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               ++VM S D +  VK G    D I ++   R   V VVD+  KLKG+IT  D  +  
Sbjct: 147 NKTVAEVMTSKDKLVTVKEGAKREDIIALMHSHRVEKVLVVDDNFKLKGMITVKDFQKAE 206

Query: 277 HK 278
            K
Sbjct: 207 QK 208


>gi|300930148|ref|ZP_07145569.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 187-1]
 gi|300461954|gb|EFK25447.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 187-1]
          Length = 503

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   ++T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 7   LTTLVEILPMLRIAKESLTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 66

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 67  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 123

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 124 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 180

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 181 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 219


>gi|94995366|ref|YP_603464.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10750]
 gi|94548874|gb|ABF38920.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS10750]
          Length = 493

 Score = 89.2 bits (220), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M    G  +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTGSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 206


>gi|319948215|ref|ZP_08022373.1| hypothetical protein ES5_02669 [Dietzia cinnamea P4]
 gi|319438118|gb|EFV93080.1| hypothetical protein ES5_02669 [Dietzia cinnamea P4]
          Length = 620

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 42/108 (38%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           V    P+ +A  I++ +R   + VV E  ++ GI T+ D+              V  +M 
Sbjct: 165 VGPDTPIREAAQIMTRERVSALVVV-EAGRVVGIFTDRDLRAKVVAVGGNPEAPVATIMT 223

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P  +   T    A  L     +  L V       +G+V   DLLR 
Sbjct: 224 PDPVTVDAHTRAFDATLLQMDRGVHHLPVC-QDGAPMGMVTTSDLLRL 270



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D     V +++ ++   +  DT +  A Q++ +  +S L+VV +  + +GI    D
Sbjct: 144 ASGGDALGTPVGELLTRDAVTVGPDTPIREAAQIMTRERVSALVVV-EAGRVVGIFTDRD 202

Query: 335 LLRFGII 341
           L R  ++
Sbjct: 203 L-RAKVV 208


>gi|163758369|ref|ZP_02165457.1| inosine 5`-monophosphate dehydrogenase protein [Hoeflea
           phototrophica DFL-43]
 gi|162284658|gb|EDQ34941.1| inosine 5`-monophosphate dehydrogenase protein [Hoeflea
           phototrophica DFL-43]
          Length = 500

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 64/179 (35%), Gaps = 28/179 (15%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES-------RNFSENDFYV-LHPGGKLGTLFVCASDVM 224
             P  S+ M       LAIA+ ++       RN +  +    +H   K  +         
Sbjct: 46  NLPIISSAMDTVTEARLAIAMAQAGGIGVIHRNLTPEEQAEQVHQVKKFESGM------- 98

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFH 277
               +   +     L +A+ ++       + VV+           L GI+T  D+     
Sbjct: 99  --VVNPVTISPDAALSEALALMKAHGISGIPVVEHRGGDSSGPGHLVGILTNRDVRFASD 156

Query: 278 KDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  + ++M   N   + E    T A +LL  H I  L+VVD   + +G++   D+
Sbjct: 157 P---KQKIRELMTHENLVTVTESVEQTEAKRLLHSHRIEKLVVVDGDGRCVGLITVKDI 212


>gi|240103611|ref|YP_002959920.1| hypothetical protein TGAM_1554 [Thermococcus gammatolerans EJ3]
 gi|239911165|gb|ACS34056.1| Conserved hypothetical protein, containing CBS domains
           [Thermococcus gammatolerans EJ3]
          Length = 176

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 51/115 (44%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
                +VK    +     IL+  R G   VV E  ++ G++T+ DI        KD   +
Sbjct: 11  KRKAIIVKPDDTVHKVAKILARNRVGSAVVV-ENDEIVGVVTDRDILDKVVAKGKDPKKV 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V D+M +NP  I +D  ++ A+  + +  I  L+V     + IG V   DLL  
Sbjct: 70  KVRDIMTQNPVTIEDDYSISDAIDRMMEKGIRRLLVT-RLGRPIGFVTAADLLAA 123



 Score = 36.0 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           SV  ++ +   ++  D  +    ++L ++ +   +VV++ +  +G+V   D+L
Sbjct: 5   SVGQIVKRKAIIVKPDDTVHKVAKILARNRVGSAVVVENDE-IVGVVTDRDIL 56


>gi|150403055|ref|YP_001330349.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C7]
 gi|150034085|gb|ABR66198.1| inosine-5'-monophosphate dehydrogenase [Methanococcus maripaludis
           C7]
          Length = 500

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL            V+H    +         V  + + +  
Sbjct: 48  NIPIISAAMDTVSEKDLAIALARRGGI-----AVIHRNMTVEEQLKHIRAVKMAENLVIR 102

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +++A  I+ E     + VV E + L GI+T  D+     K +   +VE V
Sbjct: 103 DVVTVTPSSTVLEAERIMYEYNVSGLPVVCENKTLVGILTTRDLKFVPDKQV---AVETV 159

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLR 337
           M K+   + EDT     +  L ++ I  L ++D   +  +G+V   D+L+
Sbjct: 160 MTKDVLHVHEDTPYEEILNRLYENKIERLPILDKNTRELLGMVTLRDILK 209


>gi|51893134|ref|YP_075825.1| hypothetical protein STH1996 [Symbiobacterium thermophilum IAM
           14863]
 gi|51856823|dbj|BAD40981.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 142

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNT 282
               +       P+ +   I+ E   G V VVD G ++ G+IT+ DI  R   +  D+ T
Sbjct: 7   MTTDVRTCAPDTPVSEVARIMEEADCGFVPVVD-GGRVAGVITDRDIVLRAVARGRDIRT 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  + M      +  DT    A  L+    I  L VVD   + +G+V   DL
Sbjct: 66  TTARECMTSPAVTVGPDTDAHAAADLMADKQIRRLCVVD-GGRLVGVVALGDL 117



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
            D+M  + +    DT ++   +++ + +   + VVD   +  G++   D+ LR 
Sbjct: 4   RDLMTTDVRTCAPDTPVSEVARIMEEADCGFVPVVD-GGRVAGVITDRDIVLRA 56


>gi|306826420|ref|ZP_07459733.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes ATCC
           10782]
 gi|304431384|gb|EFM34380.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pyogenes ATCC
           10782]
          Length = 493

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M    G  +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTGSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 206


>gi|300711259|ref|YP_003737073.1| inosine-5'-monophosphate dehydrogenase [Halalkalicoccus jeotgali
           B3]
 gi|299124942|gb|ADJ15281.1| inosine-5'-monophosphate dehydrogenase [Halalkalicoccus jeotgali
           B3]
          Length = 493

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 57/169 (33%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA  +            VLH    +  +      V  + + I  
Sbjct: 48  NVPVLSAAMDTVTESELATEMARQGGLG-----VLHRNMDVPEMVDSIERVKRADELIIR 102

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + D   ++  +      V+DE Q++ GII+  DI            V + 
Sbjct: 103 DVVTASPEQTVRDVDAMMEREGVSGAPVIDEEQEVLGIISGTDIRPYLEVGERDA-VREA 161

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        ED     A++L+  H I  + +VD   +  G+V    +L+
Sbjct: 162 MTDEVITAPEDVSAREALELMYDHKIERVPIVDTENRLQGLVTMQGILQ 210


>gi|297622647|ref|YP_003704081.1| CBS domain-containing protein [Truepera radiovictrix DSM 17093]
 gi|297163827|gb|ADI13538.1| CBS domain containing protein [Truepera radiovictrix DSM 17093]
          Length = 209

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   V    P+++A+ +L +  +  + VVD G KL GI+T+ D+             
Sbjct: 7   MTATPQTVSSKTPVMEAMQLLRKGGYRRLPVVD-GDKLVGIVTDRDLKEATPSKATTLSV 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ L+V DVM+     +  +  +  A  L+ +H IS L VV       GI    
Sbjct: 66  YELNYLLSKLTVHDVMVTPVITVAPEEPVENAALLMEEHKISGLPVV-SGGTLQGIFTIT 124

Query: 334 DLLRF 338
           D+LR 
Sbjct: 125 DMLRA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M   P+ +   T +  AMQLLR+     L VVD   K +GIV   DL   
Sbjct: 3   VSEWMTATPQTVSSKTPVMEAMQLLRKGGYRRLPVVDGD-KLVGIVTDRDLKEA 55


>gi|71909600|ref|YP_287187.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Dechloromonas aromatica RCB]
 gi|71849221|gb|AAZ48717.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Dechloromonas aromatica RCB]
          Length = 1665

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 4/127 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              +       + P +     L +A+  +   R  CV VVD G++ +GI+TE DI R F 
Sbjct: 128 HLNTADTLMEGTFPRLPASAALDEALVAMETVRGSCVIVVD-GRRPQGIVTEHDIVRLFL 186

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-- 335
              +  ++  VM      + ED  L  A Q +  H I  L VVD      G++    L  
Sbjct: 187 SSESNPTLGSVMTHPTISVREDCPLADAAQQMLDHGIRHLTVVDSDGNLAGLLSEHTLMS 246

Query: 336 -LRFGII 341
            L+ G+I
Sbjct: 247 PLKLGLI 253



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 43/115 (37%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTL 283
               +  V        A    +      + V DE     G+++E D  ++   D  L+  
Sbjct: 71  MTSPVHSVPAKTDFRLAYREAASLGIRHIVVTDEAGLPLGVVSEADYRKHLGPDFFLHLN 130

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + +M      +     L  A+  +     S ++VVD  ++  GIV   D++R 
Sbjct: 131 TADTLMEGTFPRLPASAALDEALVAMETVRGSCVIVVD-GRRPQGIVTEHDIVRL 184



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLSV 285
                 V     L D  + + + +   V VVD    + GIITE D+ R    +     + 
Sbjct: 9   TTRSDRVAPAASLRDVASRMLDVKTSSVIVVD-QGAILGIITERDMLRAMRLRRPLEQTA 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + M      +   T   +A +      I  ++V D+    +G+V 
Sbjct: 68  RETMTSPVHSVPAKTDFRLAYREAASLGIRHIVVTDEAGLPLGVVS 113


>gi|16081368|ref|NP_393697.1| inosine 5'-monophosphate dehydrogenase [Thermoplasma acidophilum
           DSM 1728]
 gi|10639363|emb|CAC11365.1| probable inosine-5'-monophosphate dehydrogenase [Thermoplasma
           acidophilum]
          Length = 485

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 70/165 (42%), Gaps = 8/165 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV-MHSGDSIP 231
             P  S+ M     DA+AIA+  +R  +    +   P  K   +              + 
Sbjct: 45  KVPIVSSPMDTVTEDAMAIAM--ARYGAIGVIHRNQPREKEVEMVKRVKREETIIIRDVY 102

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            +    P+  A T+++ +    + VV +  KL GI+T     R+        SV DVM++
Sbjct: 103 TISPETPIEVARTLMATRNIAGLPVV-KDDKLVGIVT----KRDLEFVKKGSSVSDVMVR 157

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     E+  +  A+++L ++ I  L +VD     +G++   D++
Sbjct: 158 DVITAPENVDIDEAIEILHKNRIEKLPLVDSSGHLVGLITAKDII 202


>gi|219670935|ref|YP_002461370.1| CBS domain containing protein [Desulfitobacterium hafniense DCB-2]
 gi|219541195|gb|ACL22934.1| CBS domain containing protein [Desulfitobacterium hafniense DCB-2]
          Length = 208

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + D + ++ EK+   + VVD+  KL GI+T+GD+                +  +
Sbjct: 14  VSPEDNIADTMALMREKQINRLPVVDK-GKLVGIVTDGDLREVSPSPATTLSIFELNYLV 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              S+ DV +K       DT +  A  L+R+H I  L VV +  K +GIV   D+
Sbjct: 73  GKTSIRDVAVKKVITCTPDTKIEDAALLMREHGIGALPVV-ENGKLVGIVTESDI 126



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+  M      +  +  +   M L+R+  I+ L VVD   K +GIV   DL
Sbjct: 3   VKQFMTSRVFTVSPEDNIADTMALMREKQINRLPVVDK-GKLVGIVTDGDL 52


>gi|302348912|ref|YP_003816550.1| Inosine-5'-monophosphate dehydrogenase related protein [Acidilobus
           saccharovorans 345-15]
 gi|302329324|gb|ADL19519.1| Inosine-5'-monophosphate dehydrogenase related protein [Acidilobus
           saccharovorans 345-15]
          Length = 259

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + +K  G + VV+E +K  G+IT  DI       N+++ L+ + V + M KN   I ++ 
Sbjct: 1   MLKKDIGRLVVVNESEKPVGVITMTDIIDSLYGSNYYRPLDDIKVSEAMSKNIITIDQNK 60

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A  L+ +H +  L VVD   K  GI+   D++R 
Sbjct: 61  SLRTAASLMMRHKVGGLPVVDKDGKLAGIITRTDVVRA 98



 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLS 284
              +I  +     L  A +++   + G + VVD+  KL GIIT  D+ R +  +    L 
Sbjct: 49  MSKNIITIDQNKSLRTAASLMMRHKVGGLPVVDKDGKLAGIITRTDVVRAYGDRYEGKLK 108

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M  +         +    +L+    +  +++VD   + IG+V   DL
Sbjct: 109 VLDIMRTDFPKASPTHSIYYLAKLIESSPVRKVVIVDSDGRPIGVVSKKDL 159



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 23/155 (14%), Positives = 44/155 (28%), Gaps = 29/155 (18%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                     +       P       +     ++       V +VD   +  G++++ D+
Sbjct: 100 GDRYEGKLKVLDIMRTDFPKASPTHSIYYLAKLIESSPVRKVVIVDSDGRPIGVVSKKDL 159

Query: 273 F-----------RNFHKDLNTLSV------------------EDVMIKNPKVILEDTLLT 303
                       R   + +    V                  ED+M K       D    
Sbjct: 160 AFAYMPSALFMARGKDRYIKNKVVDPLKDKIVSLRSYLVPVAEDIMSKELITAKGDEDSA 219

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +    I  + V+DD  K IGIV   D+++ 
Sbjct: 220 AVARSMSAERIGCVPVIDDAGKLIGIVTKQDIVQL 254


>gi|116874121|ref|YP_850902.1| inosine-5'-monophosphate dehydrogenase [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116742999|emb|CAK22123.1| inosine-5'-monophosphate dehydrogenase [Listeria welshimeri serovar
           6b str. SLCC5334]
          Length = 488

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  Q  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEQERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|332795992|ref|YP_004457492.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332693727|gb|AEE93194.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 140

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 2/107 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPK 294
           G  L D + I++    G V + D+  K  GIITE DI R   K +  T  +E+V   +  
Sbjct: 19  GTKLEDVVKIMASMNIGSVIITDKE-KPVGIITERDIIRALAKGIPLTEKIENVGTMDLI 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + ED  +  A + + ++NI  L+V+D      G++   DL+R   +
Sbjct: 78  TVFEDDSIYTAAEKMNKYNIRHLVVIDKEGNFKGVISIRDLIRESYV 124



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T  V+ ++ K P    + T L   ++++   NI  +++ D   K +GI+   D++R 
Sbjct: 2   TSKVKFLISKTPVTAEKGTKLEDVVKIMASMNIGSVIITDKE-KPVGIITERDIIRA 57



 Score = 35.6 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +  V     +  A   +++     + V+D+    KG+I+  D+ R
Sbjct: 73  TMDLITVFEDDSIYTAAEKMNKYNIRHLVVIDKEGNFKGVISIRDLIR 120


>gi|302036722|ref|YP_003797044.1| hypothetical protein NIDE1368 [Candidatus Nitrospira defluvii]
 gi|300604786|emb|CBK41118.1| protein of unknown function, contains CBS domains [Candidatus
           Nitrospira defluvii]
          Length = 258

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V     + +A  +L + R G + V D+G +  GIIT+ D+  +   K  D NT +V   M
Sbjct: 145 VHKKASIKEAGRLLQKWRIGSLLV-DDGSRYIGIITDTDLSRKAVAKGLDPNTTTVLSCM 203

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K+   I +   L  A+ L+++  I  L V  +    IG++   DLLR 
Sbjct: 204 SKSVVTIEDSEPLMEALSLMKKEGIRHLPVT-EDGTIIGVLSVGDLLRA 251



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D  R   + ++  +V + M    + + +   +  A +LL++  I  L+V DD  + IGI
Sbjct: 119 RDWRRTLGERIDGHTVAEFMSAEVRSVHKKASIKEAGRLLQKWRIGSLLV-DDGSRYIGI 177

Query: 330 VHFLDLLRFGI 340
           +   DL R  +
Sbjct: 178 ITDTDLSRKAV 188



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +       G      + +     S+  ++   PL++A++++ ++    + V  E   + G
Sbjct: 183 LSRKAVAKGLDPNTTTVLSCMSKSVVTIEDSEPLMEALSLMKKEGIRHLPVT-EDGTIIG 241

Query: 266 IITEGDIFRNFHK 278
           +++ GD+ R + K
Sbjct: 242 VLSVGDLLRAYQK 254


>gi|259506333|ref|ZP_05749235.1| CBS domain protein [Corynebacterium efficiens YS-314]
 gi|259166113|gb|EEW50667.1| CBS domain protein [Corynebacterium efficiens YS-314]
          Length = 618

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V  G  + +A   +       + +     +L GI T+ D+  R     L+ T  V  +M 
Sbjct: 164 VGPGTSIREAAQTMERYAVSSLLI-QTDGELIGIATDRDMRGRVVAAALDITQPVSTIMT 222

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            NP+      L   AM L+ +  I  L +VD+  +  GIV   D++R 
Sbjct: 223 SNPRTATSQDLAFEAMLLMAELRIHHLPIVDE-GRISGIVTAADIMRL 269



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +A+ +++E R   + +VDE  ++ GI+T  DI R    D   L+ +
Sbjct: 236 EAMLLMAELRIHHLPIVDE-GRISGIVTAADIMRLLRHDPIYLTAD 280



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +   T +  A Q + ++ +S L++     + IGI    D+
Sbjct: 160 NPISVGPGTSIREAAQTMERYAVSSLLI-QTDGELIGIATDRDM 202


>gi|322689782|ref|YP_004209516.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis 157F]
 gi|320461118|dbj|BAJ71738.1| inosine-5'-monophosphate dehydrogenase [Bifidobacterium longum
           subsp. infantis 157F]
          Length = 517

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+  +         VLH    +         V  S   +  
Sbjct: 58  KAPVLSAAMDTVTESEMAIAMARNGGIG-----VLHRNLSIDDQAAQVDVVKRSESGMIT 112

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D   +  +     + VVD+  KL GIIT  D+     +D +TL V+D 
Sbjct: 113 DPLTVNPEVTLADLDKLCGKFHISGLPVVDKENKLVGIITNRDMRFIASEDYDTLKVKDD 172

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K N      +     A +LL QH +  L +VD+     G++   D ++
Sbjct: 173 MTKENLVTGPSNISKDDAHRLLAQHKVEKLPLVDEEGHLTGLITVKDFVK 222


>gi|42781359|ref|NP_978606.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10987]
 gi|42737281|gb|AAS41214.1| transcriptional regulator, RpiR family, putative [Bacillus cereus
           ATCC 10987]
          Length = 284

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 75/191 (39%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV+ ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKALQEA-NR 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|188997444|ref|YP_001931695.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188932511|gb|ACD67141.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 600

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 6/112 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLS-- 284
               +V     + DA+  ++EK  G  +V VD G    GIIT+ DI +       + S  
Sbjct: 147 QQPVIVSKDTTIYDAVKEMTEK--GAYSVIVDFGNGEYGIITDSDIRKKIILQNISTSEN 204

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VE +  K    I  D+ L  A+ L+ +HNI   +VV++  K IGI++ +DLL
Sbjct: 205 VEKIATKGLITINADSFLFDAIFLMIKHNIKR-VVVEENGKIIGILNEVDLL 255


>gi|194334240|ref|YP_002016100.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii
           DSM 271]
 gi|194312058|gb|ACF46453.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris aestuarii
           DSM 271]
          Length = 496

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 16/173 (9%)

Query: 175 PTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           P  SA M       LAIAL  S    F   +  V     ++  +    S ++ +  S+  
Sbjct: 43  PLVSAAMDTVTESELAIALARSGGIGFIHKNLTVEQQAREVARVKRYESGIIRNPISLY- 101

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 + DA+ ++ +     + ++       D   KLKGIIT  D+     K      +
Sbjct: 102 --ETATVQDALDLMQKHSISGIPIIEQPLDSNDASLKLKGIITNRDLRF---KPAPQQPI 156

Query: 286 EDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +M   N     ED  L  A ++L  + I  L++ D+     G++ F D+ +
Sbjct: 157 STIMTVNNLITAGEDIDLEDAEEILLSNKIEKLLITDNDGNLKGLITFKDIQK 209


>gi|269960763|ref|ZP_06175134.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269834427|gb|EEZ88515.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 620

 Score = 89.2 bits (220), Expect = 9e-16,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 53/111 (47%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVE 286
            + +V     +      +  K     AVV E  K+ G+IT+ D+  R   + ++    + 
Sbjct: 165 RVAVVTADQSIQTVANEMLTKC-SPCAVVYENDKIVGLITDRDMTKRVIAQGVSTDRPIS 223

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +P+ I  D L+  A  ++ QHNI  L +V +  K +G++    L++
Sbjct: 224 EVMTHDPQTIKPDDLVLHAASMMMQHNIRNLPLV-ENNKVVGVLTTTHLVQ 273


>gi|323143707|ref|ZP_08078377.1| inosine-5'-monophosphate dehydrogenase [Succinatimonas hippei YIT
           12066]
 gi|322416510|gb|EFY07174.1| inosine-5'-monophosphate dehydrogenase [Succinatimonas hippei YIT
           12066]
          Length = 489

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L     S      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLHTYLTSNIQLNIPLISAAMDTVTESNLAIALAQEGGIGFIHKNMSIERQAEEVSRVKR 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             S ++        V     + +    ++ K  F    V+D+   L GIIT  D+   F 
Sbjct: 89  FESGMV---THPISVHPNATIAEV-REMTAKYGFAGFPVIDDEDNLLGIITGRDVR--FV 142

Query: 278 KDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            DL    V +VM        + E       + L+++H I  ++VVDD     G++   D 
Sbjct: 143 TDLKK-KVFEVMTPKERLVTVREKASQEEVIGLMQKHRIEKVLVVDDTFHLKGMITVKDF 201

Query: 336 LRF 338
            + 
Sbjct: 202 KKA 204



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                +VM   + +  V+      + I ++ + R   V VVD+   LKG+IT  D  +  
Sbjct: 146 KKKVFEVMTPKERLVTVREKASQEEVIGLMQKHRIEKVLVVDDTFHLKGMITVKDFKKAA 205

Query: 277 HK 278
           +K
Sbjct: 206 NK 207


>gi|291278909|ref|YP_003495744.1| acetoin utilization protein AcuB [Deferribacter desulfuricans SSM1]
 gi|290753611|dbj|BAI79988.1| acetoin utilization protein AcuB [Deferribacter desulfuricans SSM1]
          Length = 212

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 10/123 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------HK 278
              ++  V     +  A  I+  K    + VV+  ++L GI+ + DI            +
Sbjct: 7   MTKNVITVFPDTKIDTAAYIMLSKNIKHLPVVNSEKELLGIVVKSDIREVMPESTIDKKE 66

Query: 279 DLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL+      V+D+M      I E+  L  A+  + Q  I  L VVDD  + +GI+   D+
Sbjct: 67  DLSDKKPVFVKDIMSNEVVSINENDTLEDALLFIYQGRIGALPVVDDVNRVVGIISRYDI 126

Query: 336 LRF 338
           L+ 
Sbjct: 127 LKA 129



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 25/46 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           V+D M KN   +  DT +  A  ++   NI  L VV+  ++ +GIV
Sbjct: 3   VKDWMTKNVITVFPDTKIDTAAYIMLSKNIKHLPVVNSEKELLGIV 48



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     L DA+  + + R G + VVD+  ++ GII+  DI +  
Sbjct: 87  INENDTLEDALLFIYQGRIGALPVVDDVNRVVGIISRYDILKAM 130


>gi|195619856|gb|ACG31758.1| IMP dehydrogenase [Zea mays]
 gi|195637366|gb|ACG38151.1| IMP dehydrogenase [Zea mays]
          Length = 232

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T      DVM   + + +VK    + DA+ +L + R     V+D+   L G++++ D+ 
Sbjct: 67  STGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLL 126

Query: 274 -----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                                        +      N   + DVM   P V+ E T L  
Sbjct: 127 ALDTISGAGPAEADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLED 186

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A +LL       L VVD   K +GI+   ++++  +
Sbjct: 187 AARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAAL 222



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              H   KL +             +  +V+    L DA  +L   ++  + VVD   KL 
Sbjct: 150 KTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLV 209

Query: 265 GIITEGDIFRN 275
           GIIT G++ + 
Sbjct: 210 GIITRGNVVQA 220


>gi|269792361|ref|YP_003317265.1| CBS domain containing protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
 gi|269099996|gb|ACZ18983.1| CBS domain containing protein [Thermanaerovibrio acidaminovorans
           DSM 6589]
          Length = 867

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    + +A  ++       + VV     L+GIIT  D+ +     L  + V + M +N
Sbjct: 321 VREDQTVEEAYRLMIRYGHSALPVV-LDGHLRGIITRKDLDKAQLHGLGAVPVREFMTEN 379

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     +  A +LL  HN+  L VVD     +GIV   D+LR 
Sbjct: 380 VISVSPRAPIWEAHRLLVSHNVGRLPVVDRDD-LVGIVTRTDMLRA 424



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                   +++  V    P+ +A  +L     G + VVD    L GI+T  D+ R  
Sbjct: 370 VPVREFMTENVISVSPRAPIWEAHRLLVSHNVGRLPVVDRDD-LVGIVTRTDMLRAL 425


>gi|331700303|ref|YP_004336542.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
 gi|326954992|gb|AEA28689.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
          Length = 141

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 56/121 (46%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           + + G ++  +     + D I +L+   +G + V+D G +L GI++E D+ R  H+   D
Sbjct: 7   LRNKGSAVATIGADASVGDVIAVLTTGNYGALPVMD-GARLAGIVSERDVVRKLHELGPD 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L    V D+M  +              +++ +  I  L V+    + +GIV   D+++  
Sbjct: 66  LVRTPVADIMTADVVTCSPGDSALELSRVMTERRIRHLPVI-ADGELVGIVSIGDMVKAR 124

Query: 340 I 340
           I
Sbjct: 125 I 125


>gi|126735760|ref|ZP_01751505.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. CCS2]
 gi|126714947|gb|EBA11813.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. CCS2]
          Length = 482

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  V     ++  +    S    +  + 
Sbjct: 39  NIPLLSSAMDTVTEGRMAIAMAQAGGIGVVHKNLSVAEQAKEIRRVKRFVSG---TVYNP 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    L DA  ++   R     VV    K+ GI+T  D+   F +D +   V  +M 
Sbjct: 96  VTLRPDQTLADAKALMERYRITGFPVVGLEGKVVGIVTNRDMR--FAQD-DKTPVSVMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E   L  A  L++   I  L++ D+  K  G++   D
Sbjct: 153 TDNLAMLQEPADLDEARSLMQARRIEKLLITDEQGKLTGLLTLKD 197



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++ I+   VV    K +GIV   D+
Sbjct: 94  NPVTLRPDQTLADAKALMERYRITGFPVVGLEGKVVGIVTNRDM 137


>gi|194432046|ref|ZP_03064335.1| inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae 1012]
 gi|300898392|ref|ZP_07116735.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 198-1]
 gi|300981967|ref|ZP_07175813.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 45-1]
 gi|300998061|ref|ZP_07181921.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 200-1]
 gi|301024737|ref|ZP_07188377.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 69-1]
 gi|301047137|ref|ZP_07194233.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 185-1]
 gi|194419575|gb|EDX35655.1| inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae 1012]
 gi|300300939|gb|EFJ57324.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 185-1]
 gi|300304040|gb|EFJ58560.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 200-1]
 gi|300357932|gb|EFJ73802.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 198-1]
 gi|300396406|gb|EFJ79944.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 69-1]
 gi|300408862|gb|EFJ92400.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 45-1]
 gi|315288085|gb|EFU47485.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 110-3]
 gi|315292455|gb|EFU51807.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 153-1]
 gi|315300489|gb|EFU59718.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 16-3]
 gi|320196342|gb|EFW70966.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli WV_060327]
 gi|324008513|gb|EGB77732.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 57-2]
 gi|324011223|gb|EGB80442.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli MS 60-1]
          Length = 503

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 7   LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 66

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 67  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 123

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DL +  V   M        + E 
Sbjct: 124 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDL-SQPVSVYMTPKERLVTVREG 180

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 181 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 219


>gi|115475836|ref|NP_001061514.1| Os08g0313200 [Oryza sativa Japonica Group]
 gi|50508236|dbj|BAD31758.1| putative CBS domain containing protein [Oryza sativa Japonica
           Group]
 gi|113623483|dbj|BAF23428.1| Os08g0313200 [Oryza sativa Japonica Group]
 gi|215768507|dbj|BAH00736.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218194170|gb|EEC76597.1| hypothetical protein OsI_14449 [Oryza sativa Indica Group]
 gi|222640324|gb|EEE68456.1| hypothetical protein OsJ_26849 [Oryza sativa Japonica Group]
 gi|258644543|dbj|BAI39797.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
 gi|258644675|dbj|BAI39922.1| CBS domain-containing protein -like [Oryza sativa Indica Group]
          Length = 235

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +      D M   + + +VK    + +A+ +L E R     V+D+   L G++++ D+  
Sbjct: 71  SGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYDLLA 130

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   + DVM   P V+ E T L  A
Sbjct: 131 LDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNLEDA 190

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 191 ARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAAL 225



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +V+    L DA  +L E ++  + VVD   KL GIIT G++ R   K
Sbjct: 180 VVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALK 226


>gi|25027940|ref|NP_737994.1| hypothetical protein CE1384 [Corynebacterium efficiens YS-314]
 gi|23493223|dbj|BAC18194.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
          Length = 621

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V  G  + +A   +       + +     +L GI T+ D+  R     L+ T  V  +M 
Sbjct: 167 VGPGTSIREAAQTMERYAVSSLLI-QTDGELIGIATDRDMRGRVVAAALDITQPVSTIMT 225

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            NP+      L   AM L+ +  I  L +VD+  +  GIV   D++R 
Sbjct: 226 SNPRTATSQDLAFEAMLLMAELRIHHLPIVDE-GRISGIVTAADIMRL 272



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +A+ +++E R   + +VDE  ++ GI+T  DI R    D   L+ +
Sbjct: 239 EAMLLMAELRIHHLPIVDE-GRISGIVTAADIMRLLRHDPIYLTAD 283



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +   T +  A Q + ++ +S L++     + IGI    D+
Sbjct: 163 NPISVGPGTSIREAAQTMERYAVSSLLI-QTDGELIGIATDRDM 205


>gi|45357970|ref|NP_987527.1| hypothetical protein MMP0407 [Methanococcus maripaludis S2]
 gi|44920727|emb|CAF29963.1| conserved hypothetical archaeal protein with 2 CBS domains
           [Methanococcus maripaludis S2]
          Length = 137

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 54/113 (47%), Gaps = 7/113 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     +++A   L + +  C+ VV++  +  GI+T  DI  N   D  TL  ++ DVM 
Sbjct: 20  VSPESGVVEAFEALLKNKISCLPVVNQNNETIGIVTTTDIGYNLIIDEYTLETTIADVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    I +D     A++ +  +      I+ L V++   K +GI+   D+LR 
Sbjct: 80  KKVVTIKQDESAVDALKKMDLYGDGREIINQLPVINSENKLVGILSDGDILRA 132



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  + V+++M  +   +  ++ +  A + L ++ IS L VV+   + IGIV   D+
Sbjct: 4   IKEIIVKNIMSSDVVSVSPESGVVEAFEALLKNKISCLPVVNQNNETIGIVTTTDI 59



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHK 278
               +  +K     +DA+  +     G      + V++   KL GI+++GDI R   K
Sbjct: 78  MTKKVVTIKQDESAVDALKKMDLYGDGREIINQLPVINSENKLVGILSDGDILRAISK 135


>gi|19551837|ref|NP_599839.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium glutamicum
           ATCC 13032]
 gi|62389494|ref|YP_224896.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium glutamicum
           ATCC 13032]
 gi|21323368|dbj|BAB97996.1| IMP dehydrogenase/GMP reductase [Corynebacterium glutamicum ATCC
           13032]
 gi|41324828|emb|CAF19310.1| INOSITOL-MONOPHOSPHATE DEHYDROGENASE [Corynebacterium glutamicum
           ATCC 13032]
          Length = 506

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +D+V   +    +         P  SA M       +AI +
Sbjct: 15  NKVALVGLTFDDVLLLPDASDVVPSEVDTSTQLTRNIRLNTPILSAAMDTVTEARMAIGM 74

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       VLH    +         V  S                + +   + +  
Sbjct: 75  ARHGGIG-----VLHRNLSIQEQAENVELVKRSESGMVTDPVTCTPDMSIQEVDDLCARF 129

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQL 308
           R   + VVDE  KL GI T  D+   F  D+N   V +VM   P V+ E+      A+ L
Sbjct: 130 RISGLPVVDEAGKLVGICTNRDMR--FESDMNR-RVAEVMTPMPLVVAEEGVTKEQALAL 186

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + +  L ++    K +G++   D ++
Sbjct: 187 LSANKVEKLPIIAKDGKLVGLITVKDFVK 215


>gi|150016817|ref|YP_001309071.1| signal-transduction protein [Clostridium beijerinckii NCIMB 8052]
 gi|149903282|gb|ABR34115.1| putative signal-transduction protein with CBS domains [Clostridium
           beijerinckii NCIMB 8052]
          Length = 144

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 44/103 (42%), Gaps = 4/103 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKN 292
              +  A  ++ +   G + V D   KL G+IT+ DI           +   + D M  N
Sbjct: 17  EDSIERAAQMMRQFDVGAIPVCDNSNKLVGMITDRDIALDCVASGASADQQKICDYMTSN 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P     D  +  A++L+ +H I  L +V +    IGIV   D+
Sbjct: 77  PVTGSPDMDVHDAVRLMSRHQIRRLPIV-ENNSVIGIVSLGDI 118



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 30/53 (56%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ++DVM K+   +  +  +  A Q++RQ ++  + V D+  K +G++   D+
Sbjct: 1   MQIKDVMSKDIVSLNSEDSIERAAQMMRQFDVGAIPVCDNSNKLVGMITDRDI 53


>gi|254166877|ref|ZP_04873731.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|289596315|ref|YP_003483011.1| sugar isomerase (SIS) [Aciduliprofundum boonei T469]
 gi|197624487|gb|EDY37048.1| SIS domain protein [Aciduliprofundum boonei T469]
 gi|289534102|gb|ADD08449.1| sugar isomerase (SIS) [Aciduliprofundum boonei T469]
          Length = 178

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 6/171 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S+E SL        +  V+ I   K ++ + G G+SG +G   A  L   G  ++F+ 
Sbjct: 10  LESIEKSLNSIDVSLVNHGVDMITEAK-QIFVYGSGRSGLVGKFFAMRLVQLGLVAYFIG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++ + DL++++S +G +     +    +R    +IAITS  KS +A HAD
Sbjct: 69  ETITP-----VVNKGDLVVLISNTGRTQSTLLVESIVKRVGAKVIAITSSAKSPLAKHAD 123

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           +   +  E E        T      +   D++  +L+     +E D    H
Sbjct: 124 LTFVIRYEKEKGELAPLGTLFEDAAVVFLDSIISSLMNKLGQTEEDMRRRH 174


>gi|329938560|ref|ZP_08287985.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
 gi|329302533|gb|EGG46424.1| hypothetical protein SGM_3477 [Streptomyces griseoaurantiacus M045]
          Length = 243

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/137 (17%), Positives = 49/137 (35%), Gaps = 25/137 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
               +   +      +    L+E R G + VVDE   + G+++E D+             
Sbjct: 10  MTTDVVHTEHDASFKEIAGTLAEHRVGGLPVVDEDGHVVGVVSETDLTIHQAETRLVHEP 69

Query: 273 ------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                        R      +  +  ++M      +     +  A + + +H +  L V+
Sbjct: 70  PRGRRFAWLTPRARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVL 129

Query: 321 DDCQKAIGIVHFLDLLR 337
           D+  + +GIV   DL+R
Sbjct: 130 DEEGRLVGIVSRHDLVR 146



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L V  VM  +      D         L +H +  L VVD+    +G+V   DL 
Sbjct: 1   MRQLKVGSVMTTDVVHTEHDASFKEIAGTLAEHRVGGLPVVDEDGHVVGVVSETDLT 57



 Score = 41.8 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F  L P  +  T    A        +  + V     +++A   +   +   + V+DE  +
Sbjct: 75  FAWLTPRARRRTAKAHARTAGELMTTPAITVHAQDTVVEAARTMVRHQVHRLPVLDEEGR 134

Query: 263 LKGIITEGDIFRNFHK 278
           L GI++  D+ R F +
Sbjct: 135 LVGIVSRHDLVRTFLR 150


>gi|219848345|ref|YP_002462778.1| CBS domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219542604|gb|ACL24342.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
          Length = 427

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 61/153 (39%), Gaps = 25/153 (16%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
              GG L      A  + H   S   V +  P+ + + +L E+    + V+D  +K+ GI
Sbjct: 108 RRAGGALPAHLTVAHVMTHDVVS---VTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGI 164

Query: 267 ITEGDIFRNFHKDLNTL----------------------SVEDVMIKNPKVILEDTLLTV 304
           +T+ D+ +     L                          V +VM  NP  I     L  
Sbjct: 165 VTDADLLQRGVSQLPLHLQQLLPNDDRAAQLAAVASRPERVGEVMTPNPTTIPATASLAQ 224

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A  ++ +++   L VVD+  + +GI+   DLL+
Sbjct: 225 AALVMTKNDHKRLPVVDNEGRLVGIISRSDLLQ 257



 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 50/130 (38%), Gaps = 25/130 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +P+V     L + +  +         V+D+ +++ GI+++GDI R           
Sbjct: 284 MARDVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDGDILRRAMRPVSPGLL 343

Query: 276 ---------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                              L   +  +VM      +  DT +T A++ +  H I  L V+
Sbjct: 344 QRFAMWIGGGTRSPELALALQNQTAANVMTSPVITVTPDTPITTAIEQMIAHRIKRLPVI 403

Query: 321 DDCQKAIGIV 330
           DD  + +G+V
Sbjct: 404 DDQGRLVGMV 413



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
              +   +     L  A  ++++     + VVD   +L GII+  D+ +    +      
Sbjct: 209 MTPNPTTIPATASLAQAALVMTKNDHKRLPVVDNEGRLVGIISRSDLLQTVANNFAISGE 268

Query: 281 -------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                     +V +VM ++  V+  DT L+  +  +        +V+D  ++ IGIV   
Sbjct: 269 TLSAEFVTATTVGEVMARDVPVVTPDTSLSETLDRILSTPRRRAVVIDQDRRVIGIVSDG 328

Query: 334 DLLR 337
           D+LR
Sbjct: 329 DILR 332



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 33/68 (48%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R        L+V  VM  +   +  DT +   ++LL +  +  + V+D  +K +GIV  
Sbjct: 108 RRAGGALPAHLTVAHVMTHDVVSVTVDTPVGEVVRLLIERGLRAMPVIDADRKVVGIVTD 167

Query: 333 LDLLRFGI 340
            DLL+ G+
Sbjct: 168 ADLLQRGV 175


>gi|326488002|dbj|BAJ89840.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326512290|dbj|BAJ96126.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 230

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/152 (23%), Positives = 58/152 (38%), Gaps = 29/152 (19%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
               D M   + + +VK    + +A+  L E R     V D+   L G++++ D+     
Sbjct: 69  YTVGDFMTKREHLHVVKPSTSVDEALERLVEHRITGFPVTDDHWNLVGVVSDYDLLALDS 128

Query: 274 ----------------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQL 308
                                 R   K L+  +   V DVM   P V+ E T L  A +L
Sbjct: 129 ISGNGQAEPDIFPEVDSTWKTFREIQKLLSKTNGKVVSDVMTSAPLVVRETTNLEDAARL 188

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           L       L VVD   K +GI+   +++R  +
Sbjct: 189 LLVTKYRRLPVVDGSGKLVGIITRGNVVRAAL 220



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 28/71 (39%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                  KL +             +  +V+    L DA  +L   ++  + VVD   KL 
Sbjct: 148 KTFREIQKLLSKTNGKVVSDVMTSAPLVVRETTNLEDAARLLLVTKYRRLPVVDGSGKLV 207

Query: 265 GIITEGDIFRN 275
           GIIT G++ R 
Sbjct: 208 GIITRGNVVRA 218


>gi|319404605|emb|CBI78211.1| inosine-5'-monophosphate dehydrogenase [Bartonella rochalimae ATCC
           BAA-1498]
          Length = 499

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 70/200 (35%), Gaps = 13/200 (6%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +   + + L      +   +   P  SA M       LAIA+ ++          +
Sbjct: 23  PGHSLVMPSQVDLKTRIAADIELN--LPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNM 79

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------Q 261
            P  +   +            +   +     L +A  ++       + VV+ G       
Sbjct: 80  SPAEQAEEVRQVKKFESGMVVNPVTIGPDATLEEAKDLMRAHSISGIPVVESGAKGKISG 139

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +L GI+T  D+            + ++M   N   + E+  L  A  LL  H I  L+VV
Sbjct: 140 RLVGILTNRDVRFASDP---KQKIYELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVV 196

Query: 321 DDCQKAIGIVHFLDLLRFGI 340
           D+  + +G+V   D+ +  +
Sbjct: 197 DEQDRCVGLVTVKDIEKARL 216


>gi|302344164|ref|YP_003808693.1| signal transduction protein with CBS domains [Desulfarculus baarsii
           DSM 2075]
 gi|301640777|gb|ADK86099.1| putative signal transduction protein with CBS domains
           [Desulfarculus baarsii DSM 2075]
          Length = 222

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
                  V     ++ A  ++ E     + V D+  +L GIITE D+             
Sbjct: 7   MTHDPLTVTPDTSVMRASQMMKENTIRRLPVTDDQGRLVGIITETDLKDASPSKATTLDV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L  L V+D+M +    I     +  A   + +H I+ L V+D   K +G++   
Sbjct: 67  HELYYLLAELKVKDIMTREVITIGVGETVEKAAVKMLEHRITGLPVMD-GGKLVGVISQG 125

Query: 334 DLLRF 338
           D+ R 
Sbjct: 126 DVFRL 130



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V++ M  +P  +  DT +  A Q+++++ I  L V DD  + +GI+   DL
Sbjct: 3   VKEWMTHDPLTVTPDTSVMRASQMMKENTIRRLPVTDDQGRLVGIITETDL 53


>gi|224003561|ref|XP_002291452.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973228|gb|EED91559.1| hypothetical protein THAPSDRAFT_262854 [Thalassiosira pseudonana
           CCMP1335]
          Length = 279

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                G     L    S +      I        ++  + +L+ KR     + D    + 
Sbjct: 153 KSFKSGKNSVKLADPVSKLRPKAPMIS--HSDDTVLAVVQLLANKRGDAAIITDNNGGMA 210

Query: 265 GIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GIIT+ D+  R   K+L+  T S+ DVM  NP  +      T A+  + ++    L V D
Sbjct: 211 GIITDTDVTRRVVAKNLSPSTTSISDVMTANPTCVSMSDPATEALVTMVENRFRHLPVTD 270

Query: 322 DCQKAIGIV 330
           D    +G++
Sbjct: 271 DNGAVVGVL 279



 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 42/94 (44%), Gaps = 3/94 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILE 298
            + +L+ KR     + DE   L GIIT+ DI  R   K L+  +  V D M  NP  +  
Sbjct: 4   VVQLLTNKRGDAAIITDERGGLAGIITDTDITRRVVAKHLSPSSTCVSDAMTSNPTCVAM 63

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               T A+  + ++    L V DD    +G++  
Sbjct: 64  SDPATEALVTMVENRFRHLPVTDDNGAVVGVLDI 97



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 34/85 (40%), Gaps = 5/85 (5%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D         L     C SD M S  +   V +  P  +A+  + E RF  + V D
Sbjct: 29  ITDTDITRRVVAKHLSPSSTCVSDAMTSNPTC--VAMSDPATEALVTMVENRFRHLPVTD 86

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           +   + G++   DI +  +  +  L
Sbjct: 87  DNGAVVGVL---DIAKCLNDAITKL 108


>gi|168039489|ref|XP_001772230.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676561|gb|EDQ63043.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 175

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/153 (22%), Positives = 60/153 (39%), Gaps = 29/153 (18%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
               D M     +    +   + +A+ +L EKR   + V+D+   L G++++ D+     
Sbjct: 1   YTVGDYMTPVSDLYCATVNTTIDEALEVLVEKRITGMPVIDDAGALVGVVSDYDLLALDS 60

Query: 274 ----------------------RNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                 R   K L   N   V DVM  +P V+ E T L  A ++
Sbjct: 61  ISGQRQPETSLFPEAGRTWKAFREIQKLLVKTNGKMVGDVMTPSPLVVREHTNLEDAARV 120

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L       L VV D  K +G++   +++R  +I
Sbjct: 121 LLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALI 153


>gi|162448320|ref|YP_001610687.1| hypothetical protein sce0051 [Sorangium cellulosum 'So ce 56']
 gi|161158902|emb|CAN90207.1| hypothetical protein sce0051 [Sorangium cellulosum 'So ce 56']
          Length = 648

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 8/111 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-------SV 285
           V+    +  A ++++ +    V V DE  +L G+++   + R   +            +V
Sbjct: 525 VRPTDIVDFAASVMAWRHVRHVPVEDEQGRLVGVVSHRALLRLVARGAAAPPSGSAPPTV 584

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M  +P  +  DT    AM+++R+H +  L VV   ++ +GIV   DLL
Sbjct: 585 ASIMRPDPVTVAPDTPTLEAMRIMREHRVGCLPVV-AGERLVGIVTQRDLL 634



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + D+ R+ ++     +V   M  +   +    ++  A  ++   ++  + V D+  + +G
Sbjct: 503 DLDLVRDSYR-----TVGQFMSTDLFTVRPTDIVDFAASVMAWRHVRHVPVEDEQGRLVG 557

Query: 329 IVHFLDLLRF 338
           +V    LLR 
Sbjct: 558 VVSHRALLRL 567



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G+     + +M        V    P ++A+ I+ E R GC+ VV  G++L GI+T+ D+ 
Sbjct: 578 GSAPPTVASIMRPDPVT--VAPDTPTLEAMRIMREHRVGCLPVV-AGERLVGIVTQRDLL 634


>gi|26248869|ref|NP_754909.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli CFT073]
 gi|91211831|ref|YP_541817.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli UTI89]
 gi|110642670|ref|YP_670400.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli 536]
 gi|191172911|ref|ZP_03034446.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli F11]
 gi|227887540|ref|ZP_04005345.1| inositol-5-monophosphate dehydrogenase [Escherichia coli 83972]
 gi|237705015|ref|ZP_04535496.1| inositol-5-monophosphate dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|293405946|ref|ZP_06649938.1| inositol-5'-monophosphate dehydrogenase [Escherichia coli FVEC1412]
 gi|293410919|ref|ZP_06654495.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B354]
 gi|298381748|ref|ZP_06991347.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli FVEC1302]
 gi|26109275|gb|AAN81477.1|AE016764_159 Inosine-5'-monophosphate dehydrogenase [Escherichia coli CFT073]
 gi|91073405|gb|ABE08286.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli UTI89]
 gi|110344262|gb|ABG70499.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 536]
 gi|190906775|gb|EDV66379.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli F11]
 gi|226901381|gb|EEH87640.1| inositol-5-monophosphate dehydrogenase [Escherichia sp. 3_2_53FAA]
 gi|227835890|gb|EEJ46356.1| inositol-5-monophosphate dehydrogenase [Escherichia coli 83972]
 gi|281179559|dbj|BAI55889.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli SE15]
 gi|291428154|gb|EFF01181.1| inositol-5'-monophosphate dehydrogenase [Escherichia coli FVEC1412]
 gi|291471387|gb|EFF13871.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B354]
 gi|298279190|gb|EFI20704.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli FVEC1302]
 gi|307554528|gb|ADN47303.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli ABU 83972]
          Length = 511

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 15  LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 74

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 75  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 131

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DL +  V   M        + E 
Sbjct: 132 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDL-SQPVSVYMTPKERLVTVREG 188

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 189 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 227


>gi|109898819|ref|YP_662074.1| cyclic nucleotide-binding protein [Pseudoalteromonas atlantica T6c]
 gi|109701100|gb|ABG41020.1| cyclic nucleotide-binding protein [Pseudoalteromonas atlantica T6c]
          Length = 628

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 12/145 (8%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE----- 259
               P  K     +             ++     + DA   ++E+    + + +E     
Sbjct: 135 RESSPDKKDNNALLTVKVEKLIEQLPLILPPHTSVQDAALRMTEEGVSSLLISNEYLNDD 194

Query: 260 ----GQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                + + GI+T+ DI  R     L+ +  V D+M     ++  +  +  AM L+ +H 
Sbjct: 195 TSSDDEPVIGIVTDVDIRSRLVANGLDLSTPVTDIMTTQLTIVQSNQYVFEAMMLMLKHK 254

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ L V+    K IG++   D+LR+
Sbjct: 255 VTHLPVLRKS-KPIGLISHQDILRY 278


>gi|298528188|ref|ZP_07015592.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511840|gb|EFI35742.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 645

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 3/133 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            L P  +                   ++     +  A   +S+   G + + +E  K+ G
Sbjct: 160 RLTPKTEGSLYLFTVKVNDVIRRKPEIITPVQSVQQAAQRMSDLGIGSLLIRNEYGKVSG 219

Query: 266 IITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IIT+ DI  +   K L  +  VE VM    K I    +   A+  +  + I  L V D+ 
Sbjct: 220 IITDKDIRSKVVAKGLPYSTEVEKVMSSPIKTISAQRVCFDALLDMMSNRIHHLAVQDED 279

Query: 324 QKAIGIVHFLDLL 336
            + IG++   D+L
Sbjct: 280 -RIIGVITSHDIL 291


>gi|332796263|ref|YP_004457763.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332693998|gb|AEE93465.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 300

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L +A  IL ++      V+ EG+K+ GIIT  DI + F +      V D M  + 
Sbjct: 186 KPDMTLKEASMILYKEGIRGAPVLGEGEKVLGIITTADIIKAFFEGKYDAKVSDYMKTDV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I ++  +  A++ +  +N+  L+VVD  Q+ IGIV   D+L+   G+
Sbjct: 246 ITIRDEEDVLEAIRKMVIYNVGRLLVVDSMQRVIGIVTRTDILKSIAGL 294



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ R     +    V++++ +    +  D  L  A  +L +  I    V+ + +K +GI+
Sbjct: 162 DVKRMIS--VPKEKVKNIIGRRLITLKPDMTLKEASMILYKEGIRGAPVLGEGEKVLGII 219

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 220 TTADIIKA 227



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      SD M +       +    +++AI  +     G + VVD  Q++ GI+T  DI 
Sbjct: 231 GKYDAKVSDYMKTDVITIRDEED--VLEAIRKMVIYNVGRLLVVDSMQRVIGIVTRTDIL 288

Query: 274 RNFH 277
           ++  
Sbjct: 289 KSIA 292


>gi|224081731|ref|XP_002306482.1| predicted protein [Populus trichocarpa]
 gi|222855931|gb|EEE93478.1| predicted protein [Populus trichocarpa]
          Length = 208

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 61/155 (39%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +      D M   + + +VK    + +A+  L E+R     V+D+  KL G++++ D+  
Sbjct: 44  SGVYTVGDFMTRKEDLHVVKPTTTVNEALETLVERRITGFPVIDDDWKLVGLVSDYDLLA 103

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   V D+M   P V+ E T L  +
Sbjct: 104 LDSISGGGRTETNMFPEVDSTWKTFNEVQMLLNKTNGKVVGDLMTPAPVVVRETTNLEDS 163

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++LL +     L VVD   K +GI+   +++R  +
Sbjct: 164 VRLLLETKYRRLPVVDADGKLVGIITRGNVVRAAL 198



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 20/80 (25%), Positives = 36/80 (45%), Gaps = 8/80 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
            + F+E    +    GK+    +          +  +V+    L D++ +L E ++  + 
Sbjct: 125 WKTFNEVQMLLNKTNGKVVGDLMT--------PAPVVVRETTNLEDSVRLLLETKYRRLP 176

Query: 256 VVDEGQKLKGIITEGDIFRN 275
           VVD   KL GIIT G++ R 
Sbjct: 177 VVDADGKLVGIITRGNVVRA 196


>gi|217968156|ref|YP_002353662.1| RpiR family transcriptional regulator [Dictyoglomus turgidum DSM
           6724]
 gi|217337255|gb|ACK43048.1| transcriptional regulator, RpiR family [Dictyoglomus turgidum DSM
           6724]
          Length = 281

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 5/197 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +       + +     ++ +   ++  L+ +      + ++ES+L      +   A++ I
Sbjct: 70  IALATEKIQPIKTVHQAVQEGDDLETILKKVF--SANIRAMESTLNVISVKEIERAIDAI 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              + ++ I G+G SG +          TG P+     +        ++   D++I +S 
Sbjct: 128 LNAR-QLQIYGVGGSGPVALDAQHKFMKTGIPTVAYIDSHMMAMSASILEPQDVVIGISA 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGSS ++   L  A+      I IT   K+ +    DI L++  E          T++ I
Sbjct: 187 SGSSKDIFEALELAKNRGATTIGITHYAKTPLDRVLDIKLSVSSEETFYRTE--STSARI 244

Query: 181 MQLAIGDALAIALLESR 197
            QL+I D L I +   R
Sbjct: 245 AQLSIIDTLYIGVALKR 261


>gi|312897743|ref|ZP_07757159.1| inosine-5'-monophosphate dehydrogenase [Megasphaera micronuciformis
           F0359]
 gi|310621127|gb|EFQ04671.1| inosine-5'-monophosphate dehydrogenase [Megasphaera micronuciformis
           F0359]
          Length = 485

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 65/171 (38%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   I +
Sbjct: 43  NVPIMSSGMDTVTEAPMAIAIAREGGIG-----VIHKNMSIAEQAREVDKVKRSEHGIII 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  +  KL GIIT  D+   F +D++   + D 
Sbjct: 98  DPIFLHPDNILADANELMGKYRISGVPITVD-GKLVGIITNRDMR--FEEDMSR-RIGDT 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +N       T L  A ++LR+H I  L +VD      G++   D+ + 
Sbjct: 154 MTQENLVTAPVGTSLAEAREILRRHRIEKLPLVDKDNNLKGLITIKDIEKA 204


>gi|315655202|ref|ZP_07908103.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
           51333]
 gi|315490457|gb|EFU80081.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii ATCC
           51333]
          Length = 511

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       +AIA+            +LH    + +       V  S       
Sbjct: 56  IPLISAAMDTVTESRMAIAMARQGGIG-----ILHRNLSIESQAQQVRQVKRSESGMVTD 110

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     +     + ++ R   + VV +  +L GIIT  D+         T +V D M
Sbjct: 111 PVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPTAQWGTKTVRDCM 170

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P            AM+LL ++ I  L ++D+  K  G++   D ++
Sbjct: 171 TPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLTGLITVKDFVK 219


>gi|307352907|ref|YP_003893958.1| CBS domain-containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156140|gb|ADN35520.1| CBS domain containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 301

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 63/134 (47%), Gaps = 3/134 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              H G  +  L     ++M        V+    + +  +++ EK+ G + ++D    +K
Sbjct: 81  SRKHKGNVISALNDSVREIMSPKVLS--VRENARIQEVASLIVEKKCGGIPILDSDGAIK 138

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+TE D+ +  +   + L+V DVM ++P +   D  +T   + +  H    L VV +  
Sbjct: 139 GIVTERDVLKVMNYQDSPLTVRDVMTRSPYITSPDNTVTNVAKEMISHKFRRLPVVSED- 197

Query: 325 KAIGIVHFLDLLRF 338
              GI+  +D++++
Sbjct: 198 VLFGIITAMDIMKY 211



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              S  +      + +    +   +F  + VV E   L GIIT  DI +           
Sbjct: 163 MTRSPYITSPDNTVTNVAKEMISHKFRRLPVVSED-VLFGIITAMDIMKYVGNGGVFKNM 221

Query: 279 ------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 D+ ++SV DVM  N      D     A   + + N+  L V++D    +G++  
Sbjct: 222 VTGDVSDIISVSVRDVMSGNLYTTSPDVSTRDAAIQMIEKNVGALPVIEDSN-LVGVITE 280

Query: 333 LDLLRF 338
            D++R 
Sbjct: 281 FDVVRL 286



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 17/129 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDI------------ 272
           S   +  V     +I A+  ++EK F  + V D G  K+ GI+T GDI            
Sbjct: 20  STADVITVSPRMSIIGAVETMAEKGFRRLPVTDSGTGKVLGIVTAGDIINFIGGGEKFNL 79

Query: 273 --FRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
              ++    ++ L  SV ++M      + E+  +     L+ +     + ++D      G
Sbjct: 80  VSRKHKGNVISALNDSVREIMSPKVLSVRENARIQEVASLIVEKKCGGIPILDSDGAIKG 139

Query: 329 IVHFLDLLR 337
           IV   D+L+
Sbjct: 140 IVTERDVLK 148



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           V ++   +   +     +  A++ + +     L V D    K +GIV   D++
Sbjct: 16  VGEISTADVITVSPRMSIIGAVETMAEKGFRRLPVTDSGTGKVLGIVTAGDII 68



 Score = 39.9 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S       ++          DA   + EK  G + V+++   L G+ITE D+ R   +
Sbjct: 232 VSVRDVMSGNLYTTSPDVSTRDAAIQMIEKNVGALPVIEDSN-LVGVITEFDVVRLLSQ 289


>gi|304315006|ref|YP_003850153.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588465|gb|ADL58840.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 515

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 2/131 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H    L                + +      L +    + +     + VVD    L+GI+
Sbjct: 376 HSTKPLEIRRPSIMVRELESKPVIITHEDDDLREVARKMVDNNINHIPVVDSQGILRGIV 435

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  DI     +     S++DVM +   V  E+  + V  + + ++NIS L +VD+  +  
Sbjct: 436 TSWDIADAVARG--KKSLKDVMTRRVIVARENEPVDVVARRIDKYNISGLPIVDEENRVK 493

Query: 328 GIVHFLDLLRF 338
           GI+   D+ R 
Sbjct: 494 GIITAEDISRL 504



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               + + +   P+      + +     + +VDE  ++KGIIT  DI R   K
Sbjct: 455 MTRRVIVARENEPVDVVARRIDKYNISGLPIVDEENRVKGIITAEDISRLIGK 507


>gi|291298616|ref|YP_003509894.1| inosine-5'-monophosphate dehydrogenase [Stackebrandtia nassauensis
           DSM 44728]
 gi|290567836|gb|ADD40801.1| inosine-5'-monophosphate dehydrogenase [Stackebrandtia nassauensis
           DSM 44728]
          Length = 495

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/206 (21%), Positives = 79/206 (38%), Gaps = 13/206 (6%)

Query: 138 SIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            IPL  +T ++  ++   +D+V   +    +         P  SA M       +AIA+ 
Sbjct: 6   GIPL-GLTFDDVLLLPGESDVVPSDVDTSTKLTRNITLRMPLLSAAMDTVTEARMAIAMA 64

Query: 195 ESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
                     +    H   ++  +    S ++              L +   + +  R  
Sbjct: 65  RQGGLGVIHRNLSAEHQAQQVDLVKRSESGMV---ADPVTCAPYQTLAEVDALCARYRIS 121

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQ 311
            V VVDE  KL GI+T  D+   F  D+ T+ V DVM   +            A+ LL++
Sbjct: 122 GVPVVDESGKLVGIVTNRDMR--FETDM-TVRVSDVMTTESLITAKVGVSTEAALDLLKR 178

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  L +VDD  +  G++   D  +
Sbjct: 179 NKVEKLPIVDDDGQLRGLITVKDFTK 204


>gi|145294774|ref|YP_001137595.1| inosine 5'-monophosphate dehydrogenase [Corynebacterium glutamicum
           R]
 gi|140844694|dbj|BAF53693.1| hypothetical protein [Corynebacterium glutamicum R]
          Length = 506

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/209 (20%), Positives = 76/209 (36%), Gaps = 16/209 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             + L+ +T ++  ++   +D+V   +    +         P  SA M       +AI +
Sbjct: 15  NKVALVGLTFDDVLLLPDASDVVPSEVDTSTQLTRNIRLNTPILSAAMDTVTEARMAIGM 74

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
                       VLH    +         V  S                + +   + +  
Sbjct: 75  ARHGGIG-----VLHRNLSIQEQAENVELVKRSESGMVTDPVTCTPDMSIQEVDDLCARF 129

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED-TLLTVAMQL 308
           R   + VVDE  KL GI T  D+   F  D+N   V +VM   P V+ E+      A+ L
Sbjct: 130 RISGLPVVDEAGKLVGICTNRDMR--FESDMNR-RVAEVMTPMPLVVAEEGVTKEQALAL 186

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + +  L ++    K +G++   D ++
Sbjct: 187 LSANKVEKLPIIAKDGKLVGLITVKDFVK 215


>gi|320451029|ref|YP_004203125.1| acetoin utilization protein AcuB [Thermus scotoductus SA-01]
 gi|320151198|gb|ADW22576.1| acetoin utilization protein AcuB [Thermus scotoductus SA-01]
          Length = 208

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  V  G  L +A  +L EK    + V+ E  +L GIIT+ DI             
Sbjct: 7   MRFPVITVGPGVTLEEANRLLLEKGIRHLPVM-EEGRLVGIITDRDIRLATSHLNPKGPC 65

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V +VM +          +  A +++R+  I  L V+ +    +GIV  +DLL  
Sbjct: 66  PGCAQVGEVMTREVVTAHPLDPVEEAARVMRERKIGCLPVL-EDGALVGIVTGIDLLDA 123



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+DVM      +     L  A +LL +  I  L V+++  + +GI+   D+
Sbjct: 3   VQDVMRFPVITVGPGVTLEEANRLLLEKGIRHLPVMEE-GRLVGIITDRDI 52



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               P+ +A  ++ E++ GC+ V+ E   L GI+T  D+     K
Sbjct: 83  HPLDPVEEAARVMRERKIGCLPVL-EDGALVGIVTGIDLLDALLK 126


>gi|307330337|ref|ZP_07609483.1| putative signal transduction protein with CBS domains [Streptomyces
           violaceusniger Tu 4113]
 gi|306884033|gb|EFN15073.1| putative signal transduction protein with CBS domains [Streptomyces
           violaceusniger Tu 4113]
          Length = 127

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS 284
               +  V     L++A  ++  +  G V V     +L G++T+ DI  R   + ++ L+
Sbjct: 13  MTRPVIWVHPDASLVEAAQLMRAQGIGDVLV-ASDGELLGVLTDRDITLRAVAEGIDPLA 71

Query: 285 VE--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V    V   +P  I  D  +  A  L+R++ +  L VV +  + +G++   D
Sbjct: 72  VTCHAVCTPDPVTIGPDEEVAEAAALMRRYAVGRLPVV-EAGRPLGVISLGD 122



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           V +VM +    +  D  L  A QL+R   I  ++V  D  + +G++   D+ LR 
Sbjct: 9   VREVMTRPVIWVHPDASLVEAAQLMRAQGIGDVLVASD-GELLGVLTDRDITLRA 62


>gi|295689969|ref|YP_003593662.1| inosine-5'-monophosphate dehydrogenase [Caulobacter segnis ATCC
           21756]
 gi|295431872|gb|ADG11044.1| inosine-5'-monophosphate dehydrogenase [Caulobacter segnis ATCC
           21756]
          Length = 487

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         +LH             +V      + +
Sbjct: 39  NIPLVSAAMDTVTESRLAIAMAQAGGLG-----ILHRNLTNEEQADQVREVKRYESGMVI 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +   I + ++     VV+ G  KL GI+T  D+   F  D + +    
Sbjct: 94  NPLTIHPDTTLAEIREIKARRKISGFPVVERGSGKLVGILTNRDMR--FEGD-DKVPASA 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   + E      A +LLR+H I  L+VVDD  +A+G++   D+ + 
Sbjct: 151 LMTRENLITVGEGIDHREARELLRKHKIERLIVVDDAYRAVGLITVKDIEKA 202


>gi|298346656|ref|YP_003719343.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
 gi|315656882|ref|ZP_07909769.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
 gi|298236717|gb|ADI67849.1| IMP dehydrogenase [Mobiluncus curtisii ATCC 43063]
 gi|315492837|gb|EFU82441.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
           holmesii ATCC 35242]
          Length = 511

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       +AIA+            +LH    + +       V  S       
Sbjct: 56  IPLISAAMDTVTESRMAIAMARQGGIG-----ILHRNLSIESQAQQVRQVKRSESGMVTD 110

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     +     + ++ R   + VV +  +L GIIT  D+         T +V D M
Sbjct: 111 PVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPTAQWGTKTVRDCM 170

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P            AM+LL ++ I  L ++D+  K  G++   D ++
Sbjct: 171 TPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLTGLITVKDFVK 219


>gi|307285784|ref|ZP_07565918.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
 gi|306502545|gb|EFM71812.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
          Length = 282

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + +V+ ++  +  + + G+G S  +   +       G   
Sbjct: 101 QARFVHVVERSGQTLEDVAVNESVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 160 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 220 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 265


>gi|298674991|ref|YP_003726741.1| hypothetical protein Metev_1059 [Methanohalobium evestigatum
           Z-7303]
 gi|298287979|gb|ADI73945.1| protein of unknown function DUF39 [Methanohalobium evestigatum
           Z-7303]
          Length = 499

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  ++      +A   + E  F  + VV E  KL GI+T  DI +   ++   + V
Sbjct: 384 MARNVVTIQQDSSFHEAAKKIMESTFDHLPVVSEDSKLVGIVTAWDISKAVAQEKYHI-V 442

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D M ++      +  + +A   + Q  +S L VVD+ ++ +GI+   D+ + 
Sbjct: 443 KDFMTRDVVTATTEETIDIAAHHIDQKEVSALPVVDNERRVVGIITSNDISKL 495



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +    V ++M +N   I +D+    A + + +     L VV +  K +GIV   D+
Sbjct: 371 MKQTMKKPLVREIMARNVVTIQQDSSFHEAAKKIMESTFDHLPVVSEDSKLVGIVTAWDI 430

Query: 336 LRF 338
            + 
Sbjct: 431 SKA 433



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 222 DVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            ++    +  +V       +  A   + +K    + VVD  +++ GIIT  DI +   
Sbjct: 440 HIVKDFMTRDVVTATTEETIDIAAHHIDQKEVSALPVVDNERRVVGIITSNDISKLLA 497


>gi|144899054|emb|CAM75918.1| CBS domain [Magnetospirillum gryphiswaldense MSR-1]
          Length = 144

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFH--KDLNTLSVEDVMI 290
                + +A   ++++R G + +VD+  KL GI TE D +FR     +D    +++ VM 
Sbjct: 19  PHTATVREAAQEMAKRRIGAIVIVDD-GKLMGIFTERDGLFRVLAEGRDPENTTLDQVMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
                I  D  L  A+ ++  +    + VV    K +G++   D L + ++
Sbjct: 78  GKLSTIAPDRPLLHALHIMHDNGFRHMPVV-QGGKPVGMLSIRDALDYELV 127


>gi|242278922|ref|YP_002991051.1| CBS domain containing protein [Desulfovibrio salexigens DSM 2638]
 gi|242121816|gb|ACS79512.1| CBS domain containing protein [Desulfovibrio salexigens DSM 2638]
          Length = 226

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 14/117 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------------HKDLN 281
            G P+IDA+ ++ +     + V +    + GI+++ D+                    L 
Sbjct: 16  PGAPIIDAMEMMRDAGIRQIPVTEASGLVVGIVSDRDVRDAMPSKFLPGDNAAGKGDGLM 75

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L ++D+M  +P ++  DT + VA ++L +  I  L VVD+    +GIV  +D+ RF
Sbjct: 76  GLKIKDIMTHDPYIVSPDTCMEVAAEILLEKKIGGLPVVDEFG-LVGIVTEVDIYRF 131



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 22/50 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V D M +    ++    +  AM+++R   I  + V +     +GIV   D
Sbjct: 3   VGDWMTEEVLTLMPGAPIIDAMEMMRDAGIRQIPVTEASGLVVGIVSDRD 52



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 4/97 (4%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKL---GTLFVCASDVMHSGDSIPLVKIGCPL 239
           +     L + ++  R+  +       PG      G   +             +V     +
Sbjct: 37  VTEASGLVVGIVSDRDVRDAMPSKFLPGDNAAGKGDGLMGLKIKDIMTHDPYIVSPDTCM 96

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             A  IL EK+ G + VVDE   L GI+TE DI+R  
Sbjct: 97  EVAAEILLEKKIGGLPVVDEFG-LVGIVTEVDIYRFL 132


>gi|166364594|ref|YP_001656867.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
 gi|166086967|dbj|BAG01675.1| IMP dehydrogenase [Microcystis aeruginosa NIES-843]
          Length = 155

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 59/141 (41%), Gaps = 30/141 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V     L +A+ IL+EKRF  + VVD+  +L G+I+E D+             
Sbjct: 9   MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQETGVEAPPYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           +  HK L   +V +VM   P  I  D  L  A  L+   ++  L
Sbjct: 69  MLLDSVIYLQNPSRHEKLLHKALGQ-TVGEVMTDKPISITADRPLKEAASLMYDRHVRRL 127

Query: 318 MVVDDC-QKAIGIVHFLDLLR 337
            V+++   K IGI+   D++R
Sbjct: 128 PVIEEETHKVIGIITRGDIIR 148



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D+M  NP  +  +T L+ A+++L +   S L VVDD  + IG++   DL+
Sbjct: 2   TKTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHK 278
           +    PL +A +++ ++    + V++E   K+ GIIT GDI R+  K
Sbjct: 106 ITADRPLKEAASLMYDRHVRRLPVIEEETHKVIGIITRGDIIRDMAK 152


>gi|304389635|ref|ZP_07371597.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
 gi|304327188|gb|EFL94424.1| inosine-5'-monophosphate dehydrogenase [Mobiluncus curtisii subsp.
           curtisii ATCC 35241]
          Length = 511

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       +AIA+            +LH    + +       V  S       
Sbjct: 56  IPLISAAMDTVTESRMAIAMARQGGIG-----ILHRNLSIESQAQQVRQVKRSESGMVTD 110

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     +     + ++ R   + VV +  +L GIIT  D+         T +V D M
Sbjct: 111 PVTIGPNATIEQLDELCAKYRVSGLPVVTDDYELLGIITNRDLRFVPTAQWGTKTVRDCM 170

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P            AM+LL ++ I  L ++D+  K  G++   D ++
Sbjct: 171 TPMPLITGRTGISREEAMKLLAENRIEKLPLIDENGKLTGLITVKDFVK 219


>gi|222153954|ref|YP_002563131.1| inosine 5'-monophosphate dehydrogenase [Streptococcus uberis 0140J]
 gi|222114767|emb|CAR43932.1| inosine-5'-monophosphate dehydrogenase [Streptococcus uberis 0140J]
          Length = 493

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSISEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+      D     + 
Sbjct: 100 DPFFLTPNHKVAEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISDYD---APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSEQLVTAEVGTDLETAERILHEHRIEKLPLVDDNGRLSGLITIKDI 206


>gi|156932896|ref|YP_001436812.1| putative DNA-binding transcriptional regulator [Cronobacter
           sakazakii ATCC BAA-894]
 gi|156531150|gb|ABU75976.1| hypothetical protein ESA_00698 [Cronobacter sakazakii ATCC BAA-894]
          Length = 282

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ +SL      +   +V  ++  + R+V+TGIG SG +    +  L   G  + 
Sbjct: 104 KENVAAMHASLDINPEEKLLASVGLLRNAR-RIVLTGIGASGLVAKNFSWKLMKIGLNAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ LS+SG   E+      A R    ++AIT    + +  
Sbjct: 163 AEQDMHALLATVQAMEPEDLLVALSYSGERREINLAADEALRVGARILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATQCLYTIAEEQATR--SAAISSTSAQMMLADLLFMALVQQ 262


>gi|313679251|ref|YP_004056990.1| signal transduction protein with cbs domains [Oceanithermus
           profundus DSM 14977]
 gi|313151966|gb|ADR35817.1| putative signal transduction protein with CBS domains
           [Oceanithermus profundus DSM 14977]
          Length = 146

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
              +   G  +  V     + +A+  ++E   G + VVD   ++ G+ +E D  R     
Sbjct: 5   RQMLDKKGHEVYTVAPDVTVFEALEKMAEYNVGALPVVDASGQIVGLFSERDYARKVILR 64

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K    + V ++M  +   I  +T     M L+    +  L V+++  + +G +   D++
Sbjct: 65  GKASKDIPVSEIMSTHVLYITPETTDWQCMALMTDKRVRHLPVLEE-GRLVGFISIGDVV 123

Query: 337 R 337
           +
Sbjct: 124 K 124



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G               +  +         + ++++KR   + V+ 
Sbjct: 52  FSERDYA--RKVILRGKASKDIPVSEIMSTHVLYITPETTDWQCMALMTDKRVRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNFH 277
           E  +L G I+ GD+ ++  
Sbjct: 109 EEGRLVGFISIGDVVKSIM 127


>gi|254499273|ref|ZP_05111949.1| inosine-5-monophosphate dehydrogenase [Legionella drancourtii
           LLAP12]
 gi|254351517|gb|EET10376.1| inosine-5-monophosphate dehydrogenase [Legionella drancourtii
           LLAP12]
          Length = 490

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 42  NMPLVSAAMDTVTEARLAIALAQEGGIG-----IIHKNMTISAQADEVRKVKKFESGMVK 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++++  F  V VVD    L GI+T  DI   F  +L +L+V  V
Sbjct: 97  DPVTVTPDLTVRELLNVMTKHNFSGVPVVDGQN-LVGIVTSRDIR--FETNL-SLTVAKV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E         LL +H I  L+VV+   +  G++   D+ +  
Sbjct: 153 MTPKERLVTVKEGAGREEVRSLLHKHRIEKLLVVNKAFELCGLITVKDIQKAK 205


>gi|194336845|ref|YP_002018639.1| inosine-5'-monophosphate dehydrogenase [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194309322|gb|ACF44022.1| inosine-5'-monophosphate dehydrogenase [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 499

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 63/175 (36%), Gaps = 20/175 (11%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL  +         ++H    + T     + V      I  
Sbjct: 43  KIPLVSAAMDTVTESGLAIALARAGGIG-----IIHKNLTIETQAREVAKVKRYESGIIR 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDE-------GQKLKGIITEGDIFRNFHKDLN 281
                     + DA+ ++       + V+          +KLKGI+T  D+     K   
Sbjct: 98  NPFTLYEDATMQDALDLMLRHSISGIPVIARPECEGSSDRKLKGIVTNRDLR---IKPEP 154

Query: 282 TLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++M  KN     ED  L  A ++L  + I  L++ D      G++ F D+
Sbjct: 155 DAKIRNIMTSKNLITAREDVDLQKAEEILLSNKIEKLLITDSDGNLKGLITFKDI 209


>gi|251783554|ref|YP_002997859.1| inosine 5'-monophosphate dehydrogenase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
 gi|242392186|dbj|BAH82645.1| inositol-5-monophosphate dehydrogenase [Streptococcus dysgalactiae
           subsp. equisimilis GGS_124]
          Length = 493

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPDHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDESGRLSGLITIKDI 206


>gi|145219863|ref|YP_001130572.1| inosine-5'-monophosphate dehydrogenase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145206027|gb|ABP37070.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeovibrioides
           DSM 265]
          Length = 499

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 67/173 (38%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  S  F     +  V     ++  +    S ++ +    
Sbjct: 43  RIPLVSAAMDTVTEAGLAIALARSGGFGFIHKNLSVEQQAREVAKVKRFESGIIRNPF-- 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV------DEG-QKLKGIITEGDIFRNFHKDLNTL 283
            ++     + DAI ++       + VV      DEG  KLKGI+T  D+     K     
Sbjct: 101 -ILYEDATMQDAIDLMLRHSISGIPVVERPKSGDEGKMKLKGIVTNRDLR---MKPAPEA 156

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++M   N     ED  L  A   L  + I  L++ D+     G++ F D+
Sbjct: 157 KIANIMTSSNLITAREDVGLEEAEHTLLSNKIEKLLITDNEGNLKGLITFKDI 209


>gi|290968816|ref|ZP_06560353.1| transcriptional regulator, RpiR family [Megasphaera genomosp.
           type_1 str. 28L]
 gi|290781112|gb|EFD93703.1| transcriptional regulator, RpiR family [Megasphaera genomosp.
           type_1 str. 28L]
          Length = 290

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/190 (21%), Positives = 69/190 (36%), Gaps = 8/190 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEK---IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +L   LQ         AV++   I +  GRV + G G S  +   +A+     G     
Sbjct: 105 KNLTEGLQDTAGLIVPAAVDRAVSILSAAGRVEVYGFGNSATVCRDIATRYMRLGLWIQA 164

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
              A        ++   D +I +S SG+S EL   +  A++    +IAIT  ++S +A  
Sbjct: 165 YSDAHMQVTAAALLQPGDAVIAVSHSGASAELLHSVQTAKKNGAAVIAITGHSRSPLAAL 224

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           AD+ L          +      S ++ +A+GD L   L  +R      F       +   
Sbjct: 225 ADVCLC--GMGREVKYSSEAGASRLIHMALGDLLYTRLAMTR---SEIFQKNMKKMRREI 279

Query: 216 LFVCASDVMH 225
                     
Sbjct: 280 RKKRIHSDEK 289


>gi|271966979|ref|YP_003341175.1| RpiR family transcriptional regulator [Streptosporangium roseum DSM
           43021]
 gi|270510154|gb|ACZ88432.1| putative transcriptional regulator, RpiR family [Streptosporangium
           roseum DSM 43021]
          Length = 299

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/189 (23%), Positives = 80/189 (42%), Gaps = 7/189 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
               +   AE   L+   + L  +   +    VE + A + RV + G+G SG + + +A 
Sbjct: 104 DVIAKVTRAESEALADTAAQLNPD---RLGAVVEAMTAAR-RVDVYGVGASGLVAADMAQ 159

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G  S     A  +     ++   D+ + +S +G + ++ A +  AR+     +AI
Sbjct: 160 KLMRIGRSSHAFTDAHLALTSAALLGEGDVTVGVSCTGETPDVIAPMRVARKAGATTVAI 219

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +A  A+ VL       +   G     S I QL I D + + + + R F  +D 
Sbjct: 220 TNNPRSSLAELAEHVLVSAGRETAFRPGAL--ASRISQLLIVDCIFVGIAQ-RTFETSDA 276

Query: 205 YVLHPGGKL 213
            +    G L
Sbjct: 277 ALRATRGAL 285


>gi|150401107|ref|YP_001324873.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013810|gb|ABR56261.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 399

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 2/118 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--K 278
             +         +    P +DA+  +         +VD+  KL GIIT+ DI +     +
Sbjct: 63  EKISSLMFKPHCINQNTPFMDAVCEVLSSGQRAAPLVDDEGKLVGIITDHDIMKRVATSE 122

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L  + V  +M K+P  I  +  +  A  L+R+++IS L+++D   +  G++   D+L
Sbjct: 123 LLEDVKVNKLMSKSPITIDYNESIGKARSLMRKYDISRLVILDKDAEPTGMITEEDIL 180



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 51/134 (38%), Gaps = 16/134 (11%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    S   +     +  A +++ +     + ++D+  +  G+ITE DI    +K 
Sbjct: 127 VKVNKLMSKSPITIDYNESIGKARSLMRKYDISRLVILDKDAEPTGMITEEDILYKIYKP 186

Query: 280 LNTLSVED---------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              ++V D               +M         D  +T A +L+  H+I  + V+    
Sbjct: 187 KKKMTVGDMAGDKVPRMAQPVSIIMNSPLISCNVDDSVTDAAKLMEHHDIRGIPVL-KNG 245

Query: 325 KAIGIVHFLDLLRF 338
              G++  LD++++
Sbjct: 246 TLRGMITRLDIMKY 259



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +  +   +  +    P+  AI I+ +  F  + V+D+   +  +I   D+      D   
Sbjct: 7   IEVATKDVHTITPETPISKAIGIMDKNNFHNLIVLDDENNINMVIM-HDLLLATSLD--- 62

Query: 283 LSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  +M K P  I ++T    A+ ++L         +VDD  K +GI+   D+++
Sbjct: 63  EKISSLMFK-PHCINQNTPFMDAVCEVLSSGQ-RAAPLVDDEGKLVGIITDHDIMK 116



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V +V  K+   I  +T ++ A+ ++ ++N   L+V+DD    I +V   DLL
Sbjct: 5   PVIEVATKDVHTITPETPISKAIGIMDKNNFHNLIVLDDENN-INMVIMHDLL 56



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 38/205 (18%), Positives = 72/205 (35%), Gaps = 27/205 (13%)

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           S+G  +  +   E     +G+IT  D++  +    ++ EL   +   +  S   I I   
Sbjct: 90  SSGQRAAPLVDDEGKL--VGIITDHDIMKRV----ATSELLEDVKVNKLMSKSPITIDYN 143

Query: 148 NK----SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
                   +    DI   +  + ++ P G          +   D L       +  +  D
Sbjct: 144 ESIGKARSLMRKYDISRLVILDKDAEPTG---------MITEEDILYKIYKPKKKMTVGD 194

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
                 G K+  +    S +M+S      V     + DA  ++       + V+ +   L
Sbjct: 195 MA----GDKVPRMAQPVSIIMNSPLISCNV--DDSVTDAAKLMEHHDIRGIPVL-KNGTL 247

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDV 288
           +G+IT  DI +     L   SV +V
Sbjct: 248 RGMITRLDIMKYLQS-LRKESVVEV 271


>gi|86748490|ref|YP_484986.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
 gi|86571518|gb|ABD06075.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris HaA2]
          Length = 243

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 54/142 (38%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                   ++  +     ++DA   + E     + VVD G +L GII+EGD  R      
Sbjct: 2   RANQIMTANLVTIGPEASIVDAANAMLEHHVSGLPVVDGGGRLIGIISEGDFIRRAELGT 61

Query: 281 NTL------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                       V +VM  +P  I EDT +   ++ + +H++  
Sbjct: 62  QRKRSRWLRLLLGPGTCAADFVHEHGRKVGEVMTHHPHTISEDTSIEAIVRTMEKHHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+    + +GIV   +LLR 
Sbjct: 122 LPVM-RGDQLVGIVTRKNLLRA 142



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M  N   I  +  +  A   + +H++S L VVD   + IGI+   D +R
Sbjct: 1   MRANQIMTANLVTIGPEASIVDAANAMLEHHVSGLPVVDGGGRLIGIISEGDFIR 55


>gi|284047406|ref|YP_003397745.1| CBS domain containing membrane protein [Acidaminococcus fermentans
           DSM 20731]
 gi|283951627|gb|ADB46430.1| CBS domain containing membrane protein [Acidaminococcus fermentans
           DSM 20731]
          Length = 222

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 51/125 (40%), Gaps = 12/125 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               + +V     L++   ++       + VVD    LKGI+T+GD+ R    D      
Sbjct: 7   MTKVVKVVTTEQSLLEIRELMLNNNLRRIPVVDGDGHLKGIVTDGDVSRATPSDASTLDR 66

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L  +D+M K    +  +  +  A  L+ +  I  L VVD   K +GI+   
Sbjct: 67  YEANYILGKLKAKDLMTKAVITVKAEDGVETAAYLMYKFKIGALPVVDATNKVVGIISDT 126

Query: 334 DLLRF 338
           D+ + 
Sbjct: 127 DVFKA 131



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+D+M K  KV+  +  L    +L+  +N+  + VVD      GIV   D+ R 
Sbjct: 1   MQVKDLMTKVVKVVTTEQSLLEIRELMLNNNLRRIPVVDGDGHLKGIVTDGDVSRA 56



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 18/98 (18%), Positives = 39/98 (39%), Gaps = 8/98 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  VK    +  A  ++ + + G + VVD   K+ GII++ D+F+ F   L     
Sbjct: 82  MTKAVITVKAEDGVETAAYLMYKFKIGALPVVDATNKVVGIISDTDVFKAFVDLLGYAK- 140

Query: 286 EDVMIKNPKVILEDTL---LTVAMQLLRQHNISVLMVV 320
                     +        L    ++ +   ++++ VV
Sbjct: 141 ----TSTKITVDTQDKVGVLAELAEIFKNRGVNIISVV 174


>gi|255975166|ref|ZP_05425752.1| transcriptional regulator [Enterococcus faecalis T2]
 gi|255968038|gb|EET98660.1| transcriptional regulator [Enterococcus faecalis T2]
          Length = 284

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/168 (24%), Positives = 74/168 (44%), Gaps = 3/168 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           + R +  +E S Q       + +V+ ++  +  + + G+G S  +   +       G   
Sbjct: 103 QARFVHVVERSGQTLEDVAVNESVDLLEKTE-VIFVYGLGASSLVAQDIYQKFTRLGRTV 161

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
           F           LG   +  + IV+S SG++ E   +   A++  IP+++IT + KSV+ 
Sbjct: 162 FTTLDHHLFASMLGSTEKPSVFIVISNSGTNKEASTLADLAKQQGIPIVSITQDEKSVIG 221

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
             +DIVL         P   A T S + QL + D L  A   ++N+ E
Sbjct: 222 EKSDIVLQTSSGE-DVPLRSAATVSLVAQLYVVDVLFFAYA-AKNYKE 267


>gi|227823207|ref|YP_002827179.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
 gi|227342208|gb|ACP26426.1| putative CBS domain protein [Sinorhizobium fredii NGR234]
          Length = 223

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 52/128 (40%), Gaps = 24/128 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------------NFHK 278
                +  A  ++ +     V VVD+G +L G+I+EGD+ R                   
Sbjct: 15  SPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIRRTELCSGASVLMADMAIDP 74

Query: 279 DLN--------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D          +  V DVM  NP  I E+  L     L+++H I  + V+    + +GIV
Sbjct: 75  DDRANAFVRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQEHGIKRIPVM-RNGELVGIV 133

Query: 331 HFLDLLRF 338
              DLL+ 
Sbjct: 134 SRADLLQA 141



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM      +  D  +  A +L+  H++S + VVDD  + +G++   DL+R
Sbjct: 3   VKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDGGRLLGVISEGDLIR 55


>gi|323128307|gb|ADX25604.1| inosine 5'-monophosphate dehydrogenase [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 493

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPDHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDESGRLSGLITIKDI 206


>gi|146312689|ref|YP_001177763.1| putative DNA-binding transcriptional regulator [Enterobacter sp.
           638]
 gi|145319565|gb|ABP61712.1| transcriptional regulator, RpiR family [Enterobacter sp. 638]
          Length = 282

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 72/162 (44%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  +++ + R+++TGIG SG +   L   L   G  + 
Sbjct: 104 KENVTAMHATLDVNSEEKLLESVAMLRSAR-RIILTGIGASGLVARNLGWKLTKIGFNAM 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  DDL++ +S+SG   E+      A R    ++AIT    + +  
Sbjct: 163 SEQDMHALLSTVQAMAPDDLLLAISYSGERREINLAADEALRVGGKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTSAQMMLTDLLFVALVQQ 262


>gi|283457606|ref|YP_003362190.1| IMP dehydrogenase/GMP reductase [Rothia mucilaginosa DY-18]
 gi|283133605|dbj|BAI64370.1| IMP dehydrogenase/GMP reductase [Rothia mucilaginosa DY-18]
          Length = 505

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A+AIA+            V+H    +         V  S   + +
Sbjct: 49  NTPIISAAMDTVTDSAMAIAMARLGG-----MGVIHRNLSIEDQAAHVDRVKRSESGMII 103

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +   +    +   + VV E   L+GIIT  DI      D   + V D+
Sbjct: 104 NPVTIGADATIAEYDEVCGYYKVSGLPVVSEEGVLEGIITNRDIRYISRSDYEGIRVRDI 163

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P            A  LL  + I  L +VDD  K  G++   D ++
Sbjct: 164 MTPMPLVTAHPSVTKDEAFALLSHNKIERLPLVDDAGKLAGLITLKDFVK 213


>gi|219850552|ref|YP_002464985.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
 gi|219544811|gb|ACL26549.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroflexus aggregans DSM 9485]
          Length = 613

 Score = 88.8 bits (219), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 72/208 (34%), Gaps = 26/208 (12%)

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               R   PL+ + +   +++         LP           P  +A    ++ + L  
Sbjct: 81  PSLIRGQPPLVTVRAHTDTLLY-------LLPAPIFHRLRAEQPQFAAFFAASVIERLGY 133

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           AL   +          +P      L    +           +     + +A  ++  +R 
Sbjct: 134 ALQSRQ-------AESNPALFQTRLRDLIAR------PPVSISPDATVGEAARLMRAERI 180

Query: 252 GCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLL 309
             + V        GIIT+ D+  R   + L+    V  VM     VI  D L    + L+
Sbjct: 181 SSLIV---EHDPLGIITDRDLRNRVLAEGLSDATPVRRVMSAPATVISADALAFEGLLLM 237

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  I  L +VD  ++ +G+V   D+LR
Sbjct: 238 LERGIHHLPLVD-GERMVGVVTHTDILR 264


>gi|297159505|gb|ADI09217.1| hypothetical protein SBI_06097 [Streptomyces bingchenggensis BCW-1]
          Length = 138

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     +  A  ++ +   G + + DE ++L GI+T+ DI        KD + 
Sbjct: 8   MHPGAQWIPKSQTVDRAAQLMRDLNVGALPIADENERLCGILTDRDIVVGCVAEGKDCSR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  ++    P+ I  D  ++  ++ + Q+ I  L V+D  ++ +GI+   DL
Sbjct: 68  TTAGELAKGTPRWIPADADVSDVLREMEQNKIRRLPVIDKNKRLVGIISEADL 120



 Score = 49.1 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               D+M    + I +   +  A QL+R  N+  L + D+ ++  GI+   D++
Sbjct: 2   TKAADIMHPGAQWIPKSQTVDRAAQLMRDLNVGALPIADENERLCGILTDRDIV 55



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     + D +  + + +   + V+D+ ++L GII+E D+  +  +      VE V
Sbjct: 77  TPRWIPADADVSDVLREMEQNKIRRLPVIDKNKRLVGIISEADLAHHLTEPQIAEFVEKV 136


>gi|171060062|ref|YP_001792411.1| RpiR family transcriptional regulator [Leptothrix cholodnii SP-6]
 gi|170777507|gb|ACB35646.1| transcriptional regulator, RpiR family [Leptothrix cholodnii SP-6]
          Length = 284

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 58/174 (33%), Gaps = 3/174 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
              ++ I      L    + L      +   A+        R+   G+G SG +      
Sbjct: 91  DLIVKVIDNTVSALLKFRNDLATHAMERAIEALTATARAGKRIQFYGVGNSGIVAQDAQH 150

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
                G  +              M+   D  +++S SG + +L      ARR     I I
Sbjct: 151 KFFRLGVHAVAFSDGHVQVMAATMLEPGDCAVMISNSGRTRDLLDAAEIARRKGANTIVI 210

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + S +A  A I+L +    +   +  +P  S ++ L + D L  A+     
Sbjct: 211 -GASGSPLAHQAQILLAVDHPEDYDRY--SPMVSRLLHLTVIDILTTAVSLRLG 261


>gi|218897233|ref|YP_002445644.1| transcriptional regulator, RpiR family [Bacillus cereus G9842]
 gi|228900855|ref|ZP_04065070.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           4222]
 gi|228908029|ref|ZP_04071878.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           200]
 gi|228965236|ref|ZP_04126330.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|218541642|gb|ACK94036.1| transcriptional regulator, RpiR family [Bacillus cereus G9842]
 gi|228794470|gb|EEM41982.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228851626|gb|EEM96431.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           200]
 gi|228858781|gb|EEN03226.1| RpiR family transcriptional regulator [Bacillus thuringiensis IBL
           4222]
          Length = 284

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|84489243|ref|YP_447475.1| hypothetical protein Msp_0431 [Methanosphaera stadtmanae DSM 3091]
 gi|84372562|gb|ABC56832.1| GuaB [Methanosphaera stadtmanae DSM 3091]
          Length = 498

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 73/189 (38%), Gaps = 10/189 (5%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           ++C     + L  +  +  H   P  S+ M       +AI+L            V+H   
Sbjct: 26  LSCIEPNDVKLDTQVSTNYHLNTPVVSSAMDTVTEANMAISLARQGGLG-----VIHRNL 80

Query: 212 KLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            +         V ++ +        +     + +A  I+  +    + VV++   + GII
Sbjct: 81  TIEQEIKEIKKVKYANELTVKEVISISPDETVSEAQQIMDIEEISGLPVVNDDNIVVGII 140

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +  DI     K LN   V D M +    I E+T    A+ +  ++ +  L VV D  + +
Sbjct: 141 SRRDIKPLRGKYLNR-KVSDAMTQEVVTISENTTTEEALDVAYENKVERLPVVSDVNELL 199

Query: 328 GIVHFLDLL 336
           GIV   D+L
Sbjct: 200 GIVTMKDIL 208


>gi|89897787|ref|YP_521274.1| hypothetical protein DSY5041 [Desulfitobacterium hafniense Y51]
 gi|89337235|dbj|BAE86830.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 214

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 14/115 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------NFHKDL 280
           V     + D + ++ EK+   + VVD+  KL GI+T+GD+                +  +
Sbjct: 20  VSPEDNIADTMALMREKQINRLPVVDK-GKLVGIVTDGDLREVSPSPATTLSIFELNYLV 78

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              S+ DV +K       DT +  A  L+R+H I  L VV +  K +GIV   D+
Sbjct: 79  GKTSIRDVAVKKVITCTPDTKIEDAALLMREHGIGALPVV-ENGKLVGIVTESDI 132



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+  M      +  +  +   M L+R+  I+ L VVD   K +GIV   DL
Sbjct: 9   VKQFMTSRVFTVSPEDNIADTMALMREKQINRLPVVDK-GKLVGIVTDGDL 58


>gi|332158281|ref|YP_004423560.1| inosine-5'-monophosphate dehydrogenase related protein [Pyrococcus
           sp. NA2]
 gi|331033744|gb|AEC51556.1| inosine-5'-monophosphate dehydrogenase related protein [Pyrococcus
           sp. NA2]
          Length = 136

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN-TLSVEDVMI 290
           VK    + +A  ++ E   G + V+D+   + G  T+ D I R     L+  + VE +M 
Sbjct: 18  VKPNTTVQEASKLMMEFDVGSLVVIDDEGNVVGFFTKSDIIRRVVVPGLSYDVPVEKIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+   +  +T L   ++ + +H I  +++ ++  K +GI    DLL  
Sbjct: 78  KDLITVDANTPLGEVLKKMSEHRIKHILI-EEEGKIVGIFTLSDLLEA 124



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 29/60 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++  M K    +  +T +  A +L+ + ++  L+V+DD    +G     D++R  ++
Sbjct: 4   KAPIKVYMTKKLLGVKPNTTVQEASKLMMEFDVGSLVVIDDEGNVVGFFTKSDIIRRVVV 63



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                        +  V    PL + +  +SE R   + + +E  K+ GI T  D+    
Sbjct: 67  SYDVPVEKIMTKDLITVDANTPLGEVLKKMSEHRIKHILI-EEEGKIVGIFTLSDLLEAS 125

Query: 277 HKDLNTL 283
            + L T 
Sbjct: 126 RRRLETA 132


>gi|229102862|ref|ZP_04233556.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-28]
 gi|228680535|gb|EEL34718.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-28]
          Length = 284

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 74/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEKAVRALQEA-NR 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGACIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|15679237|ref|NP_276354.1| inosine-5'-monophosphate dehydrogenase related protein V
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622337|gb|AAB85715.1| inosine-5'-monophosphate dehydrogenase related protein V
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 187

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 5/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +    +       ++     G  + +A +I++EK+ G + +V    + +G+ITE DI 
Sbjct: 1   MEMETKVTVHDAMTSNVITADPGISVAEAASIMTEKKVGSI-IVKSNSEPEGLITESDII 59

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   +DL    ++V +VM +N   I  D  L+ A +L+ +++I  L VV      +GI+
Sbjct: 60  RKVVSRDLRASEVTVGEVMTRNLISIEPDRELSEAARLMAKNSIRRLPVV-RDGALVGIL 118

Query: 331 HFLDLL 336
              D++
Sbjct: 119 TSSDVM 124


>gi|260598944|ref|YP_003211515.1| putative DNA-binding transcriptional regulator [Cronobacter
           turicensis z3032]
 gi|260218121|emb|CBA32914.1| Uncharacterized HTH-type transcriptional regulator yfhH
           [Cronobacter turicensis z3032]
          Length = 295

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ +SL      +   +V  ++  + R+V+TGIG SG +    +  L   G  + 
Sbjct: 117 KENVAAMHASLDINPEEKLLASVGLLRNAR-RIVLTGIGASGLVAKNFSWKLMKIGLNAV 175

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +DL++ LS+SG   E+      A R    ++AIT    + +  
Sbjct: 176 AEQDMHALLATVQAMEPEDLLVALSYSGERREINLAADEALRVGARILAITGFTPNALQQ 235

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 236 RATQCLYTIAEEQATR--SAAISSTSAQMMLADLLFMALVQQ 275


>gi|85708836|ref|ZP_01039902.1| IMP dehydrogenase [Erythrobacter sp. NAP1]
 gi|85690370|gb|EAQ30373.1| IMP dehydrogenase [Erythrobacter sp. NAP1]
          Length = 484

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPVLSSAMDTVTEADMAIVMAQLGGIG-----VLHRNLDVEEQCAAVRAVKRFESGMVV 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L DA  ++   R   + V D   KL GI+T  D+      +     V ++
Sbjct: 94  NPITISPDAVLGDAQALMEANRISGIPVTDSEGKLCGILTNRDVRFA---ENPQQPVREL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N   +   T    A +LL Q  I  L+VVDD  + IG++   D+ + 
Sbjct: 151 MTTENLATVPLGTSQEDARRLLHQRRIEKLLVVDDDYRCIGLITVKDIEKA 201



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            + +++  V +G    DA  +L ++R   + VVD+  +  G+IT  DI +  
Sbjct: 151 MTTENLATVPLGTSQEDARRLLHQRRIEKLLVVDDDYRCIGLITVKDIEKAV 202


>gi|304312239|ref|YP_003811837.1| hypothetical protein HDN1F_26110 [gamma proteobacterium HdN1]
 gi|301797972|emb|CBL46194.1| Conserved hypothetical protein [gamma proteobacterium HdN1]
          Length = 147

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 58/117 (49%), Gaps = 5/117 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDL 280
             +      V+    ++DA+ ++++K  G + VV E +++ GIITE D  R      +  
Sbjct: 10  QKTNQQTWTVQPDTKVLDALQLMADKGVGAL-VVMEKKRVSGIITERDYARKVVLMARSS 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +T +V ++M      +  D  +   M+++    +  L V+D+  + IGIV   D+++
Sbjct: 69  HTATVSEIMSDQLLTVDPDQTVEECMEIMTDQRVRHLPVMDE-GRMIGIVSIGDVVK 124



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 34/78 (43%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+        +      A+      D +  V     + + + I++++R   + V+D
Sbjct: 52  ITERDYA--RKVVLMARSSHTATVSEIMSDQLLTVDPDQTVEECMEIMTDQRVRHLPVMD 109

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  ++ GI++ GD+ +  
Sbjct: 110 E-GRMIGIVSIGDVVKCM 126


>gi|283832047|ref|ZP_06351788.1| transcriptional regulator, RpiR family [Citrobacter youngae ATCC
           29220]
 gi|291071666|gb|EFE09775.1| transcriptional regulator, RpiR family [Citrobacter youngae ATCC
           29220]
          Length = 282

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  ++++ ++L      +   +V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 QENVAAMHATLDINSEEKLLESVTMLRSAQ-RIILTGIGASGLVAQNFAWKLLKIGFNAV 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  ++  DL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 VERDMHALLATVQALSPGDLLLAISYTGERRELNLAADETLRTGAKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RASHCLYTIAEEQATR--SAAISSTHAQMMLTDLLFMALVQQ 262


>gi|228920977|ref|ZP_04084314.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228838671|gb|EEM83975.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 284

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|254504825|ref|ZP_05116976.1| Putative nucleotidyltransferase DUF294 family [Labrenzia alexandrii
           DFL-11]
 gi|222440896|gb|EEE47575.1| Putative nucleotidyltransferase DUF294 family [Labrenzia alexandrii
           DFL-11]
          Length = 609

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 43/137 (31%), Gaps = 3/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F                                  +  A   + E     + VV+    L
Sbjct: 126 FDRSRKPQARERDLATTQVSTFMAGKPITCAADDTVQLAAIRMRENHVSSLCVVNSDDAL 185

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+      +       V+ VM  NP  +   ++ +  + L+ +  I  + +V 
Sbjct: 186 IGIVTIRDLSGKILAEGRPIETPVDAVMTANPVTLAPSSIGSDVLHLMMERRIGHVPIV- 244

Query: 322 DCQKAIGIVHFLDLLRF 338
              K  GIV   DL RF
Sbjct: 245 KGGKLAGIVTQTDLTRF 261


>gi|21911393|ref|NP_665661.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           MGAS315]
 gi|28896765|ref|NP_803115.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pyogenes
           SSI-1]
 gi|25453053|sp|Q8K5G1|IMDH_STRP3 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|21905609|gb|AAM80464.1| putative inosine monophosphate dehydrogenase [Streptococcus
           pyogenes MGAS315]
 gi|28812019|dbj|BAC64948.1| putative inosine monophosphate dehydrogenase [Streptococcus
           pyogenes SSI-1]
          Length = 493

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M    G  +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTGSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+    +       + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMRFISN---YNAPIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 206


>gi|168027670|ref|XP_001766352.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682261|gb|EDQ68680.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 260

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 29/156 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M     +    +   + +A+ +L EKR   + V+D+   L G++++ D+  
Sbjct: 82  QETYTVGDYMTPVSELYCATVNTTIDEALEVLVEKRITGMPVIDDFGALVGVVSDYDLLA 141

Query: 274 -------------------------RNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVA 305
                                    +   K L   N  +V DVM  +P V+ E T L  A
Sbjct: 142 LDSISGQRQPETSLFPEAGRTWKAFKEIQKLLIKTNGKTVGDVMTPSPLVVSEQTNLEDA 201

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++L       L VV D  K +G++   +++R  ++
Sbjct: 202 ARVLLDTKFRRLPVVGDDGKLVGLLTRGNVVRAALV 237


>gi|57640971|ref|YP_183449.1| hypothetical protein TK1036 [Thermococcus kodakarensis KOD1]
 gi|57159295|dbj|BAD85225.1| hypothetical protein, conserved, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 136

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           VK    +  A  ++ E   G + VVDE   + G +T+GDI R        NT  V+++M 
Sbjct: 18  VKPDDTVKRAGEVMVEFDIGSLVVVDENGDVVGFLTKGDIIRRMVIPGLPNTTPVKEIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+   +     L   + LL +  I  ++V ++  K +GI    DLL  
Sbjct: 78  KDLVTVPSTAPLGEVLDLLSKKGIKHVLV-EEEGKIVGIFSISDLLEA 124



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 28/60 (46%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +   M K    +  D  +  A +++ + +I  L+VVD+    +G +   D++R  +I
Sbjct: 4   RAPIRVYMTKKLIGVKPDDTVKRAGEVMVEFDIGSLVVVDENGDVVGFLTKGDIIRRMVI 63



 Score = 39.1 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    PL + + +LS+K    V V +E  K+ GI +  D+     + L T   
Sbjct: 76  MTKDLVTVPSTAPLGEVLDLLSKKGIKHVLV-EEEGKIVGIFSISDLLEASRRRLETAIA 134

Query: 286 ED 287
            +
Sbjct: 135 AE 136


>gi|77405637|ref|ZP_00782726.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           H36B]
 gi|77175781|gb|EAO78561.1| inosine-5'-monophosphate dehydrogenase [Streptococcus agalactiae
           H36B]
          Length = 311

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         ++H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----IIHKNMSIVDQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D   L + 
Sbjct: 100 DPFFLTPDNTVSEAEELMQNYRISGVPIVETLENRKLVGIITNRDMR--FISDYKQL-IS 156

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M   N       T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSQNLVTAPIGTDLETAERILHEHRIEKLPLVDDEGRLSGLITIKDI 206


>gi|229161241|ref|ZP_04289228.1| RpiR family transcriptional regulator [Bacillus cereus R309803]
 gi|228622337|gb|EEK79176.1| RpiR family transcriptional regulator [Bacillus cereus R309803]
          Length = 284

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 72/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          A+  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAIRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A++    +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKKRGARIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|222100211|ref|YP_002534779.1| Inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           neapolitana DSM 4359]
 gi|221572601|gb|ACM23413.1| Inosine-5-monophosphate dehydrogenase-related protein [Thermotoga
           neapolitana DSM 4359]
          Length = 316

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 55/135 (40%), Gaps = 5/135 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +L  +F            +  V     L+    I+  KR   V VVD  +++ GI++  D
Sbjct: 8   RLQAVFQDVRVSEFMNPDVVYVTPDKTLLHVKEIMRIKRISGVPVVDSEKRVVGIVSLED 67

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I +         SVE  M +N   + E   L   ++   ++      VV+D  K +GIV 
Sbjct: 68  IIKALEGGYIKDSVEKRMTRNVVCLRESDTLQDTVKTFEKYGYGRFPVVNDEGKLVGIVT 127

Query: 332 FLDLL-----RFGII 341
             D++     + GI+
Sbjct: 128 KHDIIYFLLAKLGIM 142



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L   ++  S       ++  ++    L D +    +  +G   VV++  KL GI+T+ 
Sbjct: 70  KALEGGYIKDSVEKRMTRNVVCLRESDTLQDTVKTFEKYGYGRFPVVNDEGKLVGIVTKH 129

Query: 271 DI 272
           DI
Sbjct: 130 DI 131


>gi|219122133|ref|XP_002181407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407393|gb|EEC47330.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 443

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 5/122 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T     S +  S      +     ++     LS KR     VV     L GI+T+ DI 
Sbjct: 1   STNERPVSKLRPSKPITSRI--DDTILRVSQTLSSKRGAASLVVSTDGSLAGIMTDTDIT 58

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R     H D +  SV +VM  NP  +        A+  + +++   L VVDD    +G++
Sbjct: 59  RRVVAKHIDTSATSVSEVMTPNPTCVAMSDSAMDALTTMVENHFRHLPVVDDQGSVVGLL 118

Query: 331 HF 332
             
Sbjct: 119 DI 120



 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVED 287
            LV     + +    +++ R   + V  +  +L G+ T  D+  R   K  DL+   V  
Sbjct: 193 TLVDPSTSIRNCGLRMADSRKAALVV--DDGELVGVFTFKDMMSRAVAKELDLDVTPVSQ 250

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM  +P+ +  D  +  A+Q +  +    L V +   + +G+V  +D++
Sbjct: 251 VMTPSPEFVSPDMTVLEALQSMHDNKFLTLPVCESDGRVVGLVDVMDVI 299



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 5/84 (5%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++ D         + T     S+VM    +   V +    +DA+T + E  F  + VVD+
Sbjct: 53  TDTDITRRVVAKHIDTSATSVSEVMTPNPTC--VAMSDSAMDALTTMVENHFRHLPVVDD 110

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL 283
              + G++   DI +  +  ++ L
Sbjct: 111 QGSVVGLL---DIAKCLNDAISKL 131


>gi|297619858|ref|YP_003707963.1| inosine-5'-monophosphate dehydrogenase [Methanococcus voltae A3]
 gi|297378835|gb|ADI36990.1| inosine-5'-monophosphate dehydrogenase [Methanococcus voltae A3]
          Length = 498

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 13/170 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI L            V+H    +       S V  + + +  
Sbjct: 44  NVPVISAAMDTVSEKEMAITLARRGG-----MAVIHRNMTIEEQVKQVSAVKRAENLVVR 98

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I+ E     + VVD+ + L GIIT  D+   F  D+N L V+DV
Sbjct: 99  DVVTVSPELTVSEVEMIMYENEISGLPVVDKNKTLLGIITTRDLK--FVPDMN-LKVKDV 155

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI-GIVHFLDLLR 337
           M K+     EDT     +  L ++ I  + +++   + + G+V   D+L+
Sbjct: 156 MTKDVLHAHEDTPYEDILNRLYENKIERMPILERETRVLMGMVTLRDILK 205


>gi|240102779|ref|YP_002959088.1| hypothetical protein TGAM_0722 [Thermococcus gammatolerans EJ3]
 gi|239910333|gb|ACS33224.1| Conserved hypothetical protein, containing 2 CBS-domains
           [Thermococcus gammatolerans EJ3]
          Length = 136

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    +  A  I++E   G + VVDE   + G +T+GDI R        NT  V ++M 
Sbjct: 18  IRPDDTVKRAGEIMTEFDIGSLVVVDENGDVVGFLTKGDIIRRLVVPGLPNTTPVREIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   +  +T L   + ++ +  +  +++ ++  K +GI    DLL  
Sbjct: 78  KNLVTVPAETPLQDVLDVMAKKGLKHILI-EENGKIVGIFSITDLLEA 124



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +   M +    I  D  +  A +++ + +I  L+VVD+    +G +   D++R  ++
Sbjct: 4   KAPIRVYMSRKLIGIRPDDTVKRAGEIMTEFDIGSLVVVDENGDVVGFLTKGDIIRRLVV 63



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V    PL D + ++++K    + + +E  K+ GI +  D+     + L T   
Sbjct: 76  MTKNLVTVPAETPLQDVLDVMAKKGLKHILI-EENGKIVGIFSITDLLEASRRKLETAIA 134

Query: 286 ED 287
            +
Sbjct: 135 TE 136


>gi|332712128|ref|ZP_08432056.1| chloride channel protein EriC [Lyngbya majuscula 3L]
 gi|332348934|gb|EGJ28546.1| chloride channel protein EriC [Lyngbya majuscula 3L]
          Length = 875

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              L  AI   S        VV    KL GIIT+ DI +N  +      +++VM   P  
Sbjct: 455 QMTLDQAIQTFSNSSHRGFPVV-AQGKLVGIITQEDIAKNRDRLPGNTPIKEVMTPQPIT 513

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +  L+  + +L +++++ L V+ + +K +GI+ F D++R 
Sbjct: 514 VRHNDTLSHVLYILNRYHLNRLPVL-ENRKLVGIITFSDIIRA 555



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L  L   D+M +  + +     L  A+Q     +     VV    K +GI+   D+ +
Sbjct: 434 RTLAGLKASDIMQRRVETLGSQMTLDQAIQTFSNSSHRGFPVV-AQGKLVGIITQEDIAK 492


>gi|119963910|ref|YP_948576.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter aurescens TC1]
 gi|119950769|gb|ABM09680.1| inosine-5'-monophosphate dehydrogenase [Arthrobacter aurescens TC1]
          Length = 503

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 55/171 (32%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   +  
Sbjct: 46  QTPLLSAAMDTVTESRMAIAMARQGGLG-----VVHRNLSIDDQAEHVDRVKRSESGMIT 100

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +   + S  R   + VVD   +L GI+T  D       +    SV D 
Sbjct: 101 NPLTIGPQATLQELDELCSRYRVSGLPVVDTDGRLLGIVTNRDTRFIPESEFPLRSVSDA 160

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K P            A   L  + I  L +VD+  + +G++   D  + 
Sbjct: 161 MTKMPLITGHVGISREEASHKLATNKIEKLPLVDEQGRLMGLITTKDFTKA 211


>gi|292654466|ref|YP_003534363.1| SpoIVFB-type metallopeptidase [Haloferax volcanii DS2]
 gi|291371025|gb|ADE03252.1| SpoIVFB-type metallopeptidase, transmembrane (TBD) [Haloferax
           volcanii DS2]
          Length = 390

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 1/119 (0%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             D+M   +++ +V     + + +  +  +R     V+     L G++T  D       +
Sbjct: 249 VRDIMTGRENLDVVDEKTSVAELLERMFVERHTGYPVL-RNGDLVGMVTLDDARGVKEVE 307

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   V+D+M      I  D     A+ L+++  +  L VVD+  + +G+V   DL+  
Sbjct: 308 RDAFRVDDIMSDELTTITPDADAMDAIALMQERGVGRLPVVDEAGELVGLVSRSDLVTA 366



 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               ++        D+M   D +  +      +DAI ++ E+  G + VVDE  +L G++
Sbjct: 301 RGVKEVERDAFRVDDIM--SDELTTITPDADAMDAIALMQERGVGRLPVVDEAGELVGLV 358

Query: 268 TEGDIFRNFH 277
           +  D+   F+
Sbjct: 359 SRSDLVTAFN 368


>gi|261403508|ref|YP_003247732.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
 gi|261370501|gb|ACX73250.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
          Length = 130

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L + I  +++     V VV +G+   GIIT+ D+ +++H      + E++M  N
Sbjct: 18  VNLDAKLSEIIKTMAKYDISSV-VVSDGETFWGIITDTDVMKHYHN--LEKTAEEIMTTN 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
           P  +  +  L  A++++ +  I  L V     +K +G++   D+++ 
Sbjct: 75  PITVSPEAPLEKAVEIMAERGIHHLYVRSPCEEKIVGVLSSKDVIKL 121


>gi|225850809|ref|YP_002731043.1| chloride channel protein [Persephonella marina EX-H1]
 gi|225645136|gb|ACO03322.1| chloride channel protein [Persephonella marina EX-H1]
          Length = 586

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)

Query: 203 DFYVLHPG-----GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           D+ +  P        L        DVM S      V    P+++   IL       + VV
Sbjct: 439 DYKINSPVHQDEFKFLILQQYRVEDVMTSTVIT--VNKETPVVEVGLILQNYGISLLPVV 496

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            E   + G+I++ D+ +  ++D+  L V+D+M  NP  +  D  L   + +  ++NI + 
Sbjct: 497 -ENDVVIGVISDSDLIKACNQDMRQLKVKDIMNPNPICVTPDLSLFNTLSIFIENNIGIA 555

Query: 318 MVVD--DCQKAIGIVHFLDL 335
            VVD  + +K IGI+   D+
Sbjct: 556 PVVDSLENKKLIGIISDFDI 575



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    VEDVM      + ++T +     +L+ + IS+L VV++    IG++   DL++ 
Sbjct: 456 LQQYRVEDVMTSTVITVNKETPVVEVGLILQNYGISLLPVVEND-VVIGVISDSDLIKA 513



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%), Gaps = 2/53 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF 276
              +   V     L + ++I  E   G   VVD  E +KL GII++ DI +  
Sbjct: 527 MNPNPICVTPDLSLFNTLSIFIENNIGIAPVVDSLENKKLIGIISDFDIGKVL 579


>gi|163783179|ref|ZP_02178173.1| hypothetical protein HG1285_14184 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881513|gb|EDP75023.1| hypothetical protein HG1285_14184 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 278

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 9/116 (7%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +  +      + +AI I+     G V VVD   +K   IIT  DI    +       V +
Sbjct: 4   NPIICSPETKVREAIDIMENHHIGSVIVVDNFSRKPVNIITHKDIISAIYHSKLDSPVSE 63

Query: 288 V------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +      M      I ED  +  A+++  +  I  L VV+     +GI+   D+L+
Sbjct: 64  LIELLEKM--ELITIREDAPVIEAIRIFEEKGIEHLPVVNKEGILVGIITGTDILK 117



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
           M+ NP +   +T +  A+ ++  H+I  ++VVD+  +K + I+   D++  
Sbjct: 1   MVCNPIICSPETKVREAIDIMENHHIGSVIVVDNFSRKPVNIITHKDIISA 51



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +  ++   P+I+AI I  EK    + VV++   L GIIT  DI +   +
Sbjct: 70  KMELITIREDAPVIEAIRIFEEKGIEHLPVVNKEGILVGIITGTDILKGLPR 121


>gi|145298851|ref|YP_001141692.1| inosine-5'-monophosphate dehydrogenase [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142851623|gb|ABO89944.1| inosine-5'-monophosphate dehydrogenase [Aeromonas salmonicida
           subsp. salmonicida A449]
          Length = 487

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKYESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    +     +  +  F    VV EG  L GIIT  D+         + +VE +M 
Sbjct: 98  VTVRPDMTIAQVKELSHKNGFAGYPVVTEGNLLVGIITGRDVRFVID---LSQTVEQIMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      + E       + L+++H I  ++VV+   K  G++   D  + 
Sbjct: 155 QKDRLVTVREGAPREEVVALMQKHRIEKVLVVNADFKLKGMITVKDFQKA 204


>gi|312879908|ref|ZP_07739708.1| CBS domain containing protein [Aminomonas paucivorans DSM 12260]
 gi|310783199|gb|EFQ23597.1| CBS domain containing protein [Aminomonas paucivorans DSM 12260]
          Length = 871

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 2/125 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G L             +  V     + +A  ++       + VV E  +L G+IT  D+ 
Sbjct: 302 GALTPVVEVGRIMSSPVMAVAPDQTVEEAYRLMIRYGHAALPVVQEE-RLVGLITRKDLD 360

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     L  + V + M ++   +     +  A +++   NI  L VVD  +  +GIV   
Sbjct: 361 KAQLHGLGAVPVVEFMTESVLTVSSRAPVGEAHRIMVSANIGRLPVVD-QETLVGIVTRT 419

Query: 334 DLLRF 338
           DLLR 
Sbjct: 420 DLLRA 424



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              V    +S+  V    P+ +A  I+     G + VVD  + L GI+T  D+ R  
Sbjct: 370 VPVVEFMTESVLTVSSRAPVGEAHRIMVSANIGRLPVVD-QETLVGIVTRTDLLRAL 425


>gi|83589982|ref|YP_429991.1| signal transduction protein [Moorella thermoacetica ATCC 39073]
 gi|83572896|gb|ABC19448.1| putative signal transduction protein with CBS domains [Moorella
           thermoacetica ATCC 39073]
          Length = 151

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 53/139 (38%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + +V    P+ D + +  EK   C  VVD+  KL+GI+T+GDI             
Sbjct: 8   MTTDVVVVHPEDPVGDVVKLFLEKGITCAVVVDQKGKLQGIVTDGDIMAAIRQRRPVYVD 67

Query: 278 ------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                             K L +  V+++M +      E+  +     L+  H I  + +
Sbjct: 68  LFNSVFVLEDTSDLNAKIKTLTSRPVKEIMTRKVITANEEATIAEVAGLMTDHRIKQVPI 127

Query: 320 VDDCQKAIGIVHFLDLLRF 338
                + +G+V   D+++ 
Sbjct: 128 T-SQDRLVGLVRRHDIVQA 145



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D+M  +  V+  +  +   ++L  +  I+  +VVD   K  GIV   D++  
Sbjct: 4   ARDIMTTDVVVVHPEDPVGDVVKLFLEKGITCAVVVDQKGKLQGIVTDGDIMAA 57


>gi|187250704|ref|YP_001875186.1| malate dehydrogenase [Elusimicrobium minutum Pei191]
 gi|186970864|gb|ACC97849.1| Malate dehydrogenase [Elusimicrobium minutum Pei191]
          Length = 486

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 42  NIPLMSAGMDTVTESKMAIAIAREGGVG-----IIHKNMSITAQAAEVDRVKRSDNGVIY 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L +A  + ++ +   V ++++  KL GIIT  D+   F  D N++ + D+
Sbjct: 97  DPFSLRKDNTLAEAKELAAKYKISGVPIINDNGKLIGIITNRDMR--FETD-NSVRIGDI 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N       T L  A ++LR   I  L +VDD  K  G++   D+
Sbjct: 154 MTKDNLVTAKIGTSLKEAKEILRGKKIEKLPLVDDKFKLKGLITIKDI 201


>gi|159028228|emb|CAO88038.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 155

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 30/141 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   V     L +A+ IL+EKRF  + VVD+  +L G+I+E D+             
Sbjct: 9   MTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLMWQETGVEAPPYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           +  HK L   +V +VM   P  I  D  L  A  L+   ++  L
Sbjct: 69  MLLDSVIYLQNPSRHEKLLHKALGQ-TVGEVMTDKPISITADRPLKEAASLMYDRHVRRL 127

Query: 318 MVVDDC-QKAIGIVHFLDLLR 337
            V+++   K IGIV   D++R
Sbjct: 128 PVIEEETHKVIGIVTRGDIIR 148



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 33/55 (60%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D+M  NP  +  +T L+ A+++L +   S L VVDD  + IG++   DL+
Sbjct: 2   TKTVADIMTPNPITVTANTSLSEAVKILAEKRFSGLPVVDDNMRLIGVISETDLM 56



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHK 278
           +    PL +A +++ ++    + V++E   K+ GI+T GDI R+  K
Sbjct: 106 ITADRPLKEAASLMYDRHVRRLPVIEEETHKVIGIVTRGDIIRDMAK 152


>gi|332527070|ref|ZP_08403152.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
 gi|332111502|gb|EGJ11485.1| signal-transduction protein [Rubrivivax benzoatilyticus JA2]
          Length = 136

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---K 278
            +     ++  V     +  A+ +L+    G + V+D G +L G+++E D  R      +
Sbjct: 1   MLHRRQGTLWHVHPDDSVFAALELLAAHEIGALLVMD-GGRLVGVVSERDYTRKVALQGR 59

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     V ++M ++   +     +   M L+ +H I  L VVD     +G++   DLL
Sbjct: 60  NSRETRVAEIMTRDVVRVPPAAPMHECMALMSEHRIRHLPVVDGS-TVLGMISMRDLL 116



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D  +  A++LL  H I  L+V+D   + +G+V   D  R 
Sbjct: 12  VHPDDSVFAALELLAAHEIGALLVMD-GGRLVGVVSERDYTRK 53



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/79 (17%), Positives = 26/79 (32%), Gaps = 1/79 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                 G               +  V    P+ + + ++SE R   + VVD G  + G+I
Sbjct: 52  RKVALQGRNSRETRVAEIMTRDVVRVPPAAPMHECMALMSEHRIRHLPVVD-GSTVLGMI 110

Query: 268 TEGDIFRNFHKDLNTLSVE 286
           +  D+      +      E
Sbjct: 111 SMRDLLDELIAEQERTIAE 129


>gi|226529195|ref|NP_001149160.1| LOC100282782 [Zea mays]
 gi|195625176|gb|ACG34418.1| IMP dehydrogenase [Zea mays]
          Length = 232

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/156 (21%), Positives = 59/156 (37%), Gaps = 29/156 (18%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T      DVM   + + +VK    + DA+ +L + R     V+D+   L G++++ D+ 
Sbjct: 67  STGSYRVGDVMTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLL 126

Query: 274 -----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                                        +      N   + DVM   P V+ E T L  
Sbjct: 127 ALDTISGAGPAEADIFPEVDSTSKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLED 186

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           A +LL       L VVD   K +GI+   ++++  +
Sbjct: 187 AARLLLVTKYRRLPVVDSSGKLVGIITRGNVVQAAL 222



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              H   KL +             +  +V+    L DA  +L   ++  + VVD   KL 
Sbjct: 150 KTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLV 209

Query: 265 GIITEGDIFRN 275
           GIIT G++ + 
Sbjct: 210 GIITRGNVVQA 220


>gi|90420025|ref|ZP_01227934.1| inosine-5'-monophosphate dehydrogenase [Aurantimonas manganoxydans
           SI85-9A1]
 gi|90336066|gb|EAS49814.1| inosine-5'-monophosphate dehydrogenase [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 501

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 64/171 (37%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NIPILSAAMDTVTEARLAIAMAQAGGIGVIH-RNLTPVEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA  ++++     + VV+ G        +L GI+T  D+        +   +
Sbjct: 105 IGPNATLGDARALMTQHNISGIPVVENGGSGGQNRGRLVGILTNRDVRFASD---DRQPI 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M K     + ++     A +LL  H I  L+VVDD    IG++   D+
Sbjct: 162 HELMTKEKLITVRDNVDQDEAKRLLHHHRIEKLLVVDDQHHCIGLITVKDI 212


>gi|84497912|ref|ZP_00996709.1| inosine-5'-monophosphate dehydrogenase [Janibacter sp. HTCC2649]
 gi|84381412|gb|EAP97295.1| inosine-5'-monophosphate dehydrogenase [Janibacter sp. HTCC2649]
          Length = 539

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            +LH    +         V  +      
Sbjct: 82  RVPLISAAMDTVTEARMAIAMARQGGLG-----ILHRNLSIEDQAYQVDLVKRTQTGRIS 136

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L D        R   + VVD    L GIIT  D+      +  T  V DV
Sbjct: 137 NPVTIGPDATLEDLDEQCGRYRVSGLPVVDPQMHLLGIITNRDLRFTPVAEWATTLVRDV 196

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P     +D     A  LLRQH    L +VD   +  G++   D ++
Sbjct: 197 MTNMPLITGPQDISHEEATSLLRQHKRERLPLVDGEGRLTGLITVKDFVK 246


>gi|326801888|ref|YP_004319707.1| signal transduction protein with CBS domains [Sphingobacterium sp.
           21]
 gi|326552652|gb|ADZ81037.1| putative signal transduction protein with CBS domains
           [Sphingobacterium sp. 21]
          Length = 142

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     ++ A+ I+ EK    + VVD    L GI TE D  R      +     ++ +VM
Sbjct: 18  VSPNDSVLGALRIMMEKNISALLVVD-QGVLLGIFTERDYARKIILKGRASANTAIHEVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             NP  +  +  +   MQL+   +   L +V++    IGI+   DL+++
Sbjct: 77  TSNPHTVGPNHSIDHCMQLMTDRHFRHLPIVENGN-LIGIISIGDLVKY 124



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+         G      +       +   V     +   + +++++ F  + +V 
Sbjct: 51  FTERDYA--RKIILKGRASANTAIHEVMTSNPHTVGPNHSIDHCMQLMTDRHFRHLPIV- 107

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E   L GII+ GD+ +   +D    
Sbjct: 108 ENGNLIGIISIGDLVKYIIEDQKQT 132



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%), Gaps = 1/41 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             +  +  +  A++++ + NIS L+VVD     +GI    D
Sbjct: 16  VSVSPNDSVLGALRIMMEKNISALLVVD-QGVLLGIFTERD 55


>gi|330820198|ref|YP_004349060.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
 gi|327372193|gb|AEA63548.1| Putative signal-transduction protein [Burkholderia gladioli BSR3]
          Length = 153

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 4/113 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLS 284
            ++  +     + DA+ +++ K  G + VV EG+ + GI+TE D  R      +      
Sbjct: 17  QTVHTIGKNDSVYDALKLMAIKGIGAL-VVKEGEDIVGIVTERDYARKVVLLERSSKDTR 75

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E++M    + +         M L+ +H +  L V+D  +K IG++   DL++
Sbjct: 76  IEEIMTVKVRYVEPSETSDQCMALMTEHRMRHLPVLDKNRKLIGVISIGDLVK 128



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 32/84 (38%), Gaps = 2/84 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+        + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLERSSKDTRIEEIMTVKVRYVEPSETSDQCMALMTEHRMRHLPVLDK 113

Query: 260 GQKLKGIITEGDIFRNFHKDLNTL 283
            +KL G+I+ GD+ ++   +    
Sbjct: 114 NRKLIGVISIGDLVKSVIAEQQDT 137


>gi|301167729|emb|CBW27313.1| inosine-5'-monophosphate dehydrogenase [Bacteriovorax marinus SJ]
          Length = 489

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 61/176 (34%), Gaps = 22/176 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYV-LHPGGKLGTLFVCASDVM 224
             P  SA M        AI L +        +N S  D    +    K            
Sbjct: 42  NIPIVSAAMDTVTEGRAAIVLAQQGGIGVVHKNLSPEDQAKEVRKVKKFEAGM------- 94

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   V     L D  ++  E++   + VVD      GIIT  D    F  DL ++ 
Sbjct: 95  --VLDPVTVSPEATLSDVFSLARERKVTGMPVVDRDNICVGIITSRDTR--FESDL-SVK 149

Query: 285 VEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M          +      A  LL +H I  L V+D+  +  G++   D+++ 
Sbjct: 150 VKDIMTTGDRLITAEKGIDPDKAQALLHKHRIEKLPVLDEKGRLAGLITIKDIMKK 205


>gi|296162991|ref|ZP_06845768.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
 gi|295886785|gb|EFG66626.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
          Length = 281

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 60/163 (36%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L              AV+ +     R+   G G SG     +       G PS  
Sbjct: 100 RTIGTLIEVRNSLSPDSVEAAVDLLANAA-RIEFYGAGGSGIAAQDIQHKFFRLGMPSVA 158

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      +IAIT    S +A  
Sbjct: 159 YSDPHTYSMSAALLGPGDVVVAVSNTGRTRDIIEAARSALARGAKVIAIT-HGSSPLARV 217

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A I L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 218 ASICLFSNVVEENDVF--SPMTSRMSHLAIGDILAVGVALKRG 258


>gi|289522442|ref|ZP_06439296.1| polyA polymerase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
 gi|289504278|gb|EFD25442.1| polyA polymerase family protein [Anaerobaculum hydrogeniformans
           ATCC BAA-1850]
          Length = 876

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + +A  ++       + +V +G  L GIIT  D+ +       T+ V + M + 
Sbjct: 322 INPDLQVDEAYKLMIRYGHSGMPIVRDGN-LVGIITRKDLDKAHLHGFGTVEVREFMTEG 380

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     ++ A +L+  HNI  L V  +    +GIV   D+LR 
Sbjct: 381 VITVHPGASISEAHRLMVFHNIGRLPV-KENGSLVGIVTRTDMLRA 425



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 44/250 (17%), Positives = 84/250 (33%), Gaps = 19/250 (7%)

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI--PLIAITSENK 149
               +   EA+   +G+         L++ G+  +   I+   R        I I  E  
Sbjct: 130 RGITILPQEATLYAMGIYEDSG---ALTFGGTCRKDYEIIATLRELGADMTQIPIFVEQS 186

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
              A    +   +    E   +G     SA+      + L++ +   R++ + D  +   
Sbjct: 187 LNSAEKHLLSELIDNSWERYINGAKVVLSALNSSQYVEGLSLFVHRLRDYFDADVAIAVV 246

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
                T  V  S       +  LV+ G         ++  R     +V+E          
Sbjct: 247 SMGQRTYIVARSREEVLNVADFLVRWGGGGHPQAASVTLTRRDPFVLVEE---------- 296

Query: 270 GDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             I R    ++   L+V  VM      I  D  +  A +L+ ++  S + +V D    +G
Sbjct: 297 --IERRLADEIRPLLTVAKVMTSPVMAINPDLQVDEAYKLMIRYGHSGMPIVRDGN-LVG 353

Query: 329 IVHFLDLLRF 338
           I+   DL + 
Sbjct: 354 IITRKDLDKA 363



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 1/60 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           F          + +  V  G  + +A  ++     G + V  E   L GI+T  D+ R  
Sbjct: 368 FGTVEVREFMTEGVITVHPGASISEAHRLMVFHNIGRLPVK-ENGSLVGIVTRTDMLRAL 426


>gi|56552217|ref|YP_163056.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241761710|ref|ZP_04759797.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|260752275|ref|YP_003225168.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
 gi|56543791|gb|AAV89945.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis ZM4]
 gi|241374018|gb|EER63551.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis ATCC 10988]
 gi|258551638|gb|ACV74584.1| inosine-5'-monophosphate dehydrogenase [Zymomonas mobilis subsp.
           mobilis NCIMB 11163]
          Length = 485

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       + I + +          VLH    +         V         
Sbjct: 39  NIPMLSSAMDTVTEAKMGIVMAQLGGIG-----VLHRNMTVEEQAEAVRQVKRYESGMVV 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L +A  ++ + +   + VV+   +L GI+T  D+    H D     V ++
Sbjct: 94  NPITITPNSNLREARALMDKYQISGIPVVEASGRLAGILTNRDVRFAEHLD---QPVSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M   N   +        A +LL Q  I  L+VVDD    +G++   D+
Sbjct: 151 MTHENLATVKPGVTQDEARRLLHQRRIEKLLVVDDNYHCLGLITVKDI 198


>gi|312136318|ref|YP_004003655.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224037|gb|ADP76893.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 293

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 55/122 (45%), Gaps = 2/122 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   +      +  +K    +  A  ILSE +     VV    K+ GI+T  DI  
Sbjct: 166 RSIPKKKVIEVGSQKLITLKPEMDVRTAAKILSENKIDGAPVV-SKGKVVGIVTLTDIVN 224

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +  K      + ++M K    + +DT +  A+ ++ ++NI  L++VD+  K +GIV   D
Sbjct: 225 SVAKKKEKCKISEIMSKRVITVEKDTNIYDAINIMTENNIGRLIIVDN-GKPVGIVTRTD 283

Query: 335 LL 336
           +L
Sbjct: 284 IL 285



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +                +  V+    + DAI I++E   G + +VD   K  GI+T  D
Sbjct: 225 SVAKKKEKCKISEIMSKRVITVEKDTNIYDAINIMTENNIGRLIIVD-NGKPVGIVTRTD 283

Query: 272 IF 273
           I 
Sbjct: 284 IL 285


>gi|288959292|ref|YP_003449633.1| CBS domain-containing protein [Azospirillum sp. B510]
 gi|288911600|dbj|BAI73089.1| CBS domain-containing protein [Azospirillum sp. B510]
          Length = 162

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF--HKDLNT 282
               +  V+    +  A  ++ +   G + V D G+ L G++T+ DI  R     K  + 
Sbjct: 24  MTRDVQTVRPDDSIRRAAQLMDQLNVGILPVCD-GRDLVGVVTDRDITIRAISAGKQPDR 82

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V +VM  NP+   ED  +    +L+    I  + VVD   +  GIV   DL
Sbjct: 83  CKVAEVMTANPRYCYEDDPVGSVTELMAGQQIRRVPVVDRNDRLTGIVSLGDL 135



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 272 IFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + R           + + ++M ++ + +  D  +  A QL+ Q N+ +L V D  +  +G
Sbjct: 4   LRRRPIATAPGSPRMKIREIMTRDVQTVRPDDSIRRAAQLMDQLNVGILPVCD-GRDLVG 62

Query: 329 IVHFLDLL 336
           +V   D+ 
Sbjct: 63  VVTDRDIT 70



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 25/76 (32%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G              +        P+     +++ ++   V VVD   +L GI++ GD
Sbjct: 75  SAGKQPDRCKVAEVMTANPRYCYEDDPVGSVTELMAGQQIRRVPVVDRNDRLTGIVSLGD 134

Query: 272 IFRNFHKDLNTLSVED 287
           +  N   D       +
Sbjct: 135 LAGNAKNDRAVQDALE 150


>gi|195979041|ref|YP_002124285.1| inosine 5'-monophosphate dehydrogenase [Streptococcus equi subsp.
           zooepidemicus MGCS10565]
 gi|195975746|gb|ACG63272.1| inosine-5'-monophosphate dehydrogenase GuaB [Streptococcus equi
           subsp. zooepidemicus MGCS10565]
          Length = 493

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSIAEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPEHKVAEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSEQLVTAEVGTDLETAERILHEHRIEKLPLVDDNGRLSGLITIKDI 206


>gi|289192998|ref|YP_003458939.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288939448|gb|ADC70203.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 194

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +             +        + +   I++E   G V +V E  K  GI+TE DI 
Sbjct: 1   MEIACDIPVSEVMSFPVITATKDMTVYEIANIMTENNIGAVVIV-ENNKPIGIVTERDIV 59

Query: 273 FRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L    V  E+VM K    I ++  +T A +++  H +  L VV    + +GIV
Sbjct: 60  KRVVSKNLKPKDVLAEEVMSKKIITIPQNASITEAAKIMATHGVKRLPVV-KDGELVGIV 118

Query: 331 HFLDLLR 337
              D++R
Sbjct: 119 TQSDIVR 125


>gi|262340945|ref|YP_003283800.1| inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
 gi|262272282|gb|ACY40190.1| inosine-5'-monophosphate dehydrogenase [Blattabacterium sp.
           (Blattella germanica) str. Bge]
          Length = 489

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M      +LAI++            ++H    +         V  S     D
Sbjct: 44  NIPILSAAMDTVTESSLAISIAREGGIG-----IIHKNMSIKNQSEEVYRVKRSESGMID 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L  A  ++++ +   + V+++   L GIIT  DI    + D     VE+V
Sbjct: 99  DPITLSRNSTLRHAQYLMNKYKISGLPVIEKDYSLVGIITRRDIKYRINLDSL---VEEV 155

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     ++  L  A  +L +  I  L ++DD  K +G++   D+
Sbjct: 156 MTKENLITSKKNITLEKAKNILLKERIEKLPIIDDNHKLVGLITIRDI 203


>gi|224096724|ref|XP_002310713.1| predicted protein [Populus trichocarpa]
 gi|222853616|gb|EEE91163.1| predicted protein [Populus trichocarpa]
          Length = 156

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 57/144 (39%), Gaps = 31/144 (21%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------- 273
            + + +VK    + +A+  L E R     V+D+  KL G++++ D+              
Sbjct: 4   KEDLHVVKPTTTVDEALEALVEHRITGFPVIDDDWKLVGLVSDYDLLALDSISGGGRTET 63

Query: 274 -----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                            R   K  N   V D+M   P V+ E T L  A +LL +     
Sbjct: 64  NMFPEVESTWKTFNEVQRLLSK-TNGKVVGDLMTPAPVVVRETTNLEDAARLLLETKYRR 122

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L VVD   K +GI+   +++R  +
Sbjct: 123 LPVVDADGKLVGIITRGNVVRAAL 146



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +  +  V+   T +  A++ L +H I+   V+DD  K +G+V   DLL
Sbjct: 1   MTRKEDLHVVKPTTTVDEALEALVEHRITGFPVIDDDWKLVGLVSDYDLL 50



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +  +V+    L DA  +L E ++  + VVD   KL GIIT G++ R 
Sbjct: 95  MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 144


>gi|323699491|ref|ZP_08111403.1| CBS domain containing membrane protein [Desulfovibrio sp. ND132]
 gi|323459423|gb|EGB15288.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
           ND132]
          Length = 224

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 52/124 (41%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  +     ++ A  ++ +K    + VVDE  ++ GI+++ DI             
Sbjct: 7   MTKDVITITPERSMMKASKLMKDKAISRLPVVDESGRIIGIVSDRDIKDASPSKATTLDV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + + D+M K    I +   +  A  L+ + N   L VVD+    +GI+   
Sbjct: 67  HELYYLLSEIKIADIMTKKVVTIRDTETVEKAAVLMLEGNFGGLPVVDENDHVVGIITDT 126

Query: 334 DLLR 337
           D+ +
Sbjct: 127 DIFK 130



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V + M K+   I  +  +  A +L++   IS L VVD+  + IGIV   D+
Sbjct: 3   VANWMTKDVITITPERSMMKASKLMKDKAISRLPVVDESGRIIGIVSDRDI 53



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  ++    +  A  ++ E  FG + VVDE   + GIIT+ DIF+  
Sbjct: 82  MTKKVVTIRDTETVEKAAVLMLEGNFGGLPVVDENDHVVGIITDTDIFKVL 132


>gi|288561286|ref|YP_003424772.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288543996|gb|ADC47880.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 283

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 4/127 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GK       A     + + I  V+      D I ++ E +     VVDE   + GIIT  
Sbjct: 3   GKTMEQEKAAVRDYMTKNVIT-VRYDSLNNDVIALMKETKHDGYPVVDEEGHIVGIITAY 61

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     KD  T  V+ +M +   V  ED  +  A +++ +H IS L VVD  +   GI+
Sbjct: 62  DL---LLKDWETEYVKSIMSQEVIVAREDMHINDASRVMFRHGISRLPVVDKERHVKGIM 118

Query: 331 HFLDLLR 337
              D++R
Sbjct: 119 TNTDIVR 125


>gi|260767722|ref|ZP_05876657.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|260617231|gb|EEX42415.1| Signal transduction protein [Vibrio furnissii CIP 102972]
          Length = 620

 Score = 88.4 bits (218), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 59/133 (44%), Gaps = 5/133 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGI 266
           HP             +  +  ++ +V    P+  A   +S +    C A+VD+ Q+L G+
Sbjct: 143 HPAQTESIFLQPVRKL--ASQNLVMVTPDTPIQQAADRMSREPNSSCAAIVDQQQRLIGL 200

Query: 267 ITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+  R     L+    +  +M      +  D L+  A +++ QH+I  + +VDD  
Sbjct: 201 VTDKDMTKRVIAHGLDVQPPIATIMTHQLHTVSVDDLVMKASEIMIQHHIQNVPIVDDNF 260

Query: 325 KAIGIVHFLDLLR 337
              GI+    L++
Sbjct: 261 TLQGIITPQQLIQ 273


>gi|90408425|ref|ZP_01216586.1| transcriptional regulator, RpiR family protein [Psychromonas sp.
           CNPT3]
 gi|90310459|gb|EAS38583.1| transcriptional regulator, RpiR family protein [Psychromonas sp.
           CNPT3]
          Length = 283

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 7/195 (3%)

Query: 8   FKSVTRKGHSLMKNSTVQ-CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
               T   + +  N  +   A + +  + R L    +++  +   QF   V+ I     R
Sbjct: 80  MPHPTHLHNQINANDPILLTAQKLLEEKSRALIETTNAINIK---QFDTVVKLINKA-NR 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I GIG SG     L+  L   G  +  V  +         + + D+ IV+S+SG+  E
Sbjct: 136 VQIIGIGGSGLCAQDLSFKLLKIGIITLCVQDSHVQIASAQTLEKKDVQIVISYSGNRKE 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +      A      +IAITS+  S +   AD  L      +   +  +  +S   Q  I 
Sbjct: 196 MLLAAEIAHEKGAKVIAITSKCSSPLHAMADFCL--HSIADETHYRSSSISSRTAQYVIT 253

Query: 187 DALAIALLESRNFSE 201
           D L ++LL+ R  S 
Sbjct: 254 DLLFLSLLQRREQSA 268


>gi|271501562|ref|YP_003334588.1| inosine-5'-monophosphate dehydrogenase [Dickeya dadantii Ech586]
 gi|270345117|gb|ACZ77882.1| inosine-5'-monophosphate dehydrogenase [Dickeya dadantii Ech586]
          Length = 487

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKRHESGVV---VDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV  G +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  QTVTPETTLREVKALTERNGFAGYPVVTTGNELVGIITGRDVR--FVTDLDR-PVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  I   +VVD   + +G++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLQKMHERRIEKALVVDAQFRLVGMITVKDFQKA 204


>gi|212640156|ref|YP_002316676.1| CBS domain-containing protein [Anoxybacillus flavithermus WK1]
 gi|212561636|gb|ACJ34691.1| FOG: CBS domain protein [Anoxybacillus flavithermus WK1]
          Length = 154

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 53/133 (39%), Gaps = 6/133 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                      L      +M     +  V     + +A  +++E   G + VV E  K+K
Sbjct: 3   AHNKKRKGRMILNHTVESIM--TRQVATVTPDQSVQEAAQLMNEHNVGAIPVV-ENGKVK 59

Query: 265 GIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G+IT+ DI  R   + L  +  V  VM  N      +  +  A +++ ++ I  L +V  
Sbjct: 60  GMITDRDITLRTTAQGLTPSTPVSQVMTSNVVTGTPNMSVNEAAEVMAKNQIRRLPIV-Q 118

Query: 323 CQKAIGIVHFLDL 335
             +  GIV   D+
Sbjct: 119 NNELCGIVALGDI 131



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +   + +   +VE +M +    +  D  +  A QL+ +HN+  + VV +  K  G++  
Sbjct: 6   KKRKGRMILNHTVESIMTRQVATVTPDQSVQEAAQLMNEHNVGAIPVV-ENGKVKGMITD 64

Query: 333 LDLL 336
            D+ 
Sbjct: 65  RDIT 68


>gi|311896506|dbj|BAJ28914.1| putative inosine-5'-monophosphate dehydrogenase [Kitasatospora
           setae KM-6054]
          Length = 500

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 62/174 (35%), Gaps = 19/174 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  + +       
Sbjct: 49  NIPLLSAAMDKVTESRMAIAMARQGGVGVLHRNLSIED--------QVNQVDLVKRSESG 100

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L +A  + +  R   V V     KL GI+T  D+   F  D  +  V
Sbjct: 101 MVTDPITVGPEATLAEADALCARFRISGVPVATPEGKLLGIVTNRDM--AFETD-RSRKV 157

Query: 286 EDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M   P            A+ LLR+H I  L +VDD  +  G++   D ++ 
Sbjct: 158 GDIMTPMPLITGKVGISGEDAVALLRRHKIEKLPLVDDEGRIKGLITVKDFVKA 211


>gi|194016492|ref|ZP_03055106.1| transcriptional regulator, RpiR family [Bacillus pumilus ATCC 7061]
 gi|194011965|gb|EDW21533.1| transcriptional regulator, RpiR family [Bacillus pumilus ATCC 7061]
          Length = 285

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S+L+ S Q         A++ I   K R+   G G SG I +        TG       
Sbjct: 109 ISALKDSFQLLNPEDVEKAIQIIHEAK-RLEFYGSGGSGLIATDAFHKFMRTGINCIVHT 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +       G++ +   +I +S SG + +L   +  A+      I ITS  +S ++  AD
Sbjct: 168 DSHFQAMSAGLLDQHSTVIGISHSGRNKDLLDAMKTAKGKGAKTIGITSYQRSPLSQLAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           + L    +  +        ++ + QL + D L  AL   R
Sbjct: 228 VTLYTATQETAFRTEA--MSARLAQLTVIDVLYFALAHLR 265


>gi|78355812|ref|YP_387261.1| hypothetical protein Dde_0765 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78218217|gb|ABB37566.1| CBS protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 224

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 12/115 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNT 282
               ++ A  ++ E  F  + +VD+  KL GII++ DI                +  L+ 
Sbjct: 16  PEMSMMRAAKLMKEHSFDRLPIVDKDNKLVGIISDRDIKEASPSKATTLDVHELYYLLSE 75

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V D+M ++      D  +  A  ++ + + S + VVDD  +  GI+   D+ +
Sbjct: 76  IKVNDIMTRDVVAAKPDDTVENAALVMLERDFSGMPVVDDDGRLTGIITDKDIFK 130



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D M ++      +  +  A +L+++H+   L +VD   K +GI+   D+   
Sbjct: 3   IRDWMSRDVISATPEMSMMRAAKLMKEHSFDRLPIVDKDNKLVGIISDRDIKEA 56



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 25/43 (58%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           K    + +A  ++ E+ F  + VVD+  +L GIIT+ DIF+  
Sbjct: 90  KPDDTVENAALVMLERDFSGMPVVDDDGRLTGIITDKDIFKVL 132


>gi|242398044|ref|YP_002993468.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sibiricus MM
           739]
 gi|242264437|gb|ACS89119.1| Inosine-5'-monophosphate dehydrogenase [Thermococcus sibiricus MM
           739]
          Length = 483

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 66/166 (39%), Gaps = 13/166 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH--SGDSI 230
             P  SA M       +AIA+            V+H    +         V    + + +
Sbjct: 47  NIPILSAAMDTVTEWEMAIAMARLGGLG-----VIHRNMSIEEQVDMVRRVKREETVEEV 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A+ ++  +    + V+ E  +L GI+T+ DI            V++VM 
Sbjct: 102 ITISPEETIDYALFLMEREGIDGLPVI-ENGELVGIVTKTDI-----TTREGERVKEVMT 155

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+     E   +   M L+ +++I  + +VDD  K +GI+   DLL
Sbjct: 156 KDVITAKESASVEEIMTLMIENSIDRVPIVDDDGKLVGIITIGDLL 201


>gi|291297328|ref|YP_003508726.1| putative signal transduction protein with CBS domains [Meiothermus
           ruber DSM 1279]
 gi|290472287|gb|ADD29706.1| putative signal transduction protein with CBS domains [Meiothermus
           ruber DSM 1279]
          Length = 145

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
            G+ +  +     + +A+  ++    G + V+ +  +L GI +E D  R      +    
Sbjct: 12  KGNKVHAISPEATVFEALERMAAHDVGALMVM-KDDQLVGIFSERDYARKIILMGRISKD 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V +VM  +   +  +  +   M L+  H+I  L V+ +  K +G++   D+++ 
Sbjct: 71  TRVGEVMTSDLITVTPEATVADCMNLMTDHHIRHLPVL-EDGKLVGVISIGDVVKA 125



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 31/78 (39%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+        +G +             +  V     + D + ++++     + V+ 
Sbjct: 52  FSERDYA--RKIILMGRISKDTRVGEVMTSDLITVTPEATVADCMNLMTDHHIRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  KL G+I+ GD+ +  
Sbjct: 109 EDGKLVGVISIGDVVKAI 126


>gi|319793129|ref|YP_004154769.1| signal transduction protein with cbs domains [Variovorax paradoxus
           EPS]
 gi|315595592|gb|ADU36658.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus EPS]
          Length = 145

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
           +    V  S     +V       + DA  +++    G V V++    L GI+TE D+  R
Sbjct: 1   MAERTVFQSVTRKHVVSLGPQASVRDAACVMTRANCGSVLVMELPDTLLGILTERDLMTR 60

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              K  D +   V +VM  NP  +  +TL++ A+ L+ +     L +V    K +G+   
Sbjct: 61  VLAKGLDPDRTPVREVMTPNPICVPPETLVSDAVVLMLERGFRHLPLV-AGAKILGVFSV 119

Query: 333 LDLL 336
            D L
Sbjct: 120 RDAL 123


>gi|85710703|ref|ZP_01041767.1| putative signal-transduction protein with CBS domains
           [Erythrobacter sp. NAP1]
 gi|85687881|gb|EAQ27886.1| putative signal-transduction protein with CBS domains
           [Erythrobacter sp. NAP1]
          Length = 172

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 3/124 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           + +       S            + DA+T ++EK FG + V D   ++ G++TE DIFR 
Sbjct: 1   MRIADRTEFASKAPPLTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNRVLGVMTERDIFRR 60

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +D  T  V +VM    +   +D  +   MQ++       L +VD+ ++ I ++  
Sbjct: 61  VIGASRDPKTTPVSEVMTTEVRAAHKDDQILDWMQIMSNERFRRLPIVDEDKRLIAVMSQ 120

Query: 333 LDLL 336
            D +
Sbjct: 121 GDFV 124



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 21/45 (46%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P     DT++  A+  + + N   + V D   + +G++   D+ R
Sbjct: 15  PLTCTPDTIVFDAVTQMAEKNFGSIFVTDPDNRVLGVMTERDIFR 59


>gi|310815769|ref|YP_003963733.1| inosine-5'-monophosphate dehydrogenase [Ketogulonicigenium vulgare
           Y25]
 gi|308754504|gb|ADO42433.1| inosine-5'-monophosphate dehydrogenase [Ketogulonicigenium vulgare
           Y25]
          Length = 482

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       +AIA+ ++         V+H              V      +  
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIG-----VVHRNLNTEQQANEVRKVKRFVSGTVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  +++        VV+E   + GI+T  D+      + +   V  +
Sbjct: 94  NPITLRPDQTLADAKALMARYAITGFPVVNESGLVVGIVTNRDMRFA---NDDKTPVSVM 150

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  N   I  E   L  A  L+R   I  L+V DD  K  G++   D
Sbjct: 151 MTSNDLAILREPADLDEARSLMRARRIEKLLVTDDAGKLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++ I+   VV++    +GIV   D+
Sbjct: 94  NPITLRPDQTLADAKALMARYAITGFPVVNESGLVVGIVTNRDM 137


>gi|189424868|ref|YP_001952045.1| signal-transduction protein with CBS domains [Geobacter lovleyi SZ]
 gi|189421127|gb|ACD95525.1| putative signal-transduction protein with CBS domains [Geobacter
           lovleyi SZ]
          Length = 478

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 4/118 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN- 281
            +    +   +    L++A   +S++    + V D   +  GI+T+ D+  +   K ++ 
Sbjct: 13  QYCRREVATCRADDQLVEAALRMSDQGISSLVVCD-NNRPVGIVTDRDLRNKVVAKGIDP 71

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +L+V  +M      I E   L  A+  + +H I  ++VV    + IGI+   D+LR 
Sbjct: 72  CSLTVSSIMTSPLITIGEQEFLFEALHRISRHGIHRIVVVSPDCRLIGIITDSDILRL 129



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++    V     +       D  L  A   +    IS L+V D+  + +GIV   DL
Sbjct: 3   DQNILFQPVGQYCRREVATCRADDQLVEAALRMSDQGISSLVVCDN-NRPVGIVTDRDL 60


>gi|229172959|ref|ZP_04300511.1| RpiR family transcriptional regulator [Bacillus cereus MM3]
 gi|228610479|gb|EEK67749.1| RpiR family transcriptional regulator [Bacillus cereus MM3]
          Length = 284

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV+ ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKVLQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAHIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|46198411|ref|YP_004078.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
 gi|55980443|ref|YP_143740.1| acetoin dehydrogenase AcuB [Thermus thermophilus HB8]
 gi|46196033|gb|AAS80451.1| acetoin utilization acuB protein [Thermus thermophilus HB27]
 gi|55771856|dbj|BAD70297.1| acetoin utilization protein AcuB (acetoin dehydrogenase) [Thermus
           thermophilus HB8]
          Length = 208

 Score = 88.4 bits (218), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------LSVE 286
           V     L +A  +L E+    + VV E  +L GI+T+ DI                  V 
Sbjct: 14  VGPEATLEEAYKLLLERGIRHLPVV-EEGRLVGIVTDRDIRLATSHLNPKGPCPGCTRVG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +VM +          +  A +++R+  I  L V++D    +GIV  +DLL  
Sbjct: 73  EVMTREVVTAHPLDPVEEAARVMRERKIGCLPVLEDE-ALVGIVTGIDLLDA 123



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V DVM      +  +  L  A +LL +  I  L VV++  + +GIV   D+
Sbjct: 3   VRDVMKSPVLTVGPEATLEEAYKLLLERGIRHLPVVEE-GRLVGIVTDRDI 52



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               P+ +A  ++ E++ GC+ V+ E + L GI+T  D+     +
Sbjct: 83  HPLDPVEEAARVMRERKIGCLPVL-EDEALVGIVTGIDLLDALLR 126


>gi|290955614|ref|YP_003486796.1| hypothetical protein SCAB_10531 [Streptomyces scabiei 87.22]
 gi|260645140|emb|CBG68226.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 233

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 19/131 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---T 282
              S+  V+      +   +L+E     V VVD+  +  G+++E D+ R     L+    
Sbjct: 10  MTTSVVRVRPDTGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLRKEAAQLDPAGL 69

Query: 283 LSV----------------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           L V                E +M            +  A Q++ +H +  L VVD+  + 
Sbjct: 70  LPVLHPKPAARAKAEAATAEGLMNSPAVTAQPQWTVVEAAQVMERHRVKRLPVVDEAGRL 129

Query: 327 IGIVHFLDLLR 337
           +G++   DLLR
Sbjct: 130 VGLISRADLLR 140



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V D+M  +   +  DT      +LL +++I+ + VVDD  + +G+V   DLLR 
Sbjct: 1   MRHRMVSDLMTTSVVRVRPDTGFKEIAKLLAEYDITAVPVVDDDDRPVGVVSEADLLRK 59



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 30/74 (40%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           VLHP          A+            +    +++A  ++   R   + VVDE  +L G
Sbjct: 72  VLHPKPAARAKAEAATAEGLMNSPAVTAQPQWTVVEAAQVMERHRVKRLPVVDEAGRLVG 131

Query: 266 IITEGDIFRNFHKD 279
           +I+  D+ R F + 
Sbjct: 132 LISRADLLRVFLRG 145


>gi|221134672|ref|ZP_03560975.1| Signaling protein with a cAMP-binding, CBS domains and predicted
           nucleotidyltransferase domain [Glaciecola sp. HTCC2999]
          Length = 610

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 68/148 (45%), Gaps = 6/148 (4%)

Query: 196 SRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
            R F+  ++D  +        ++++          +   ++    + +A  ++S+     
Sbjct: 121 KRFFTAAKDDVLLNQAVEGSNSMWLYKPLHEQLDKAPIQIEQHVSIQEAAQMMSQHGVSS 180

Query: 254 VAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
           + V  E + L GI+T+ D+  R   + ++  L+V ++M + P  IL +  +  A+ L+ +
Sbjct: 181 LIVT-EDEHLIGIVTDRDLRNRVVAQGMDIQLAVSEIMTQRPAYILHNQNMFAAIALMSE 239

Query: 312 HNISVLMVVDDCQK-AIGIVHFLDLLRF 338
            NI  L V+    +  +G+V   D++R 
Sbjct: 240 KNIHHLPVLHANDRTPVGMVTSSDVIRK 267


>gi|20091538|ref|NP_617613.1| homoserine O-acetyltransferase [Methanosarcina acetivorans C2A]
 gi|19916693|gb|AAM06093.1| homoserine O-acetyltransferase [Methanosarcina acetivorans C2A]
          Length = 540

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 53/106 (50%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     +  +  ++ ++    + V+ E  KL+GI+T  DI +     +N L  
Sbjct: 425 MNRNFYTVSRDETIEHSSKLMVKECVSHLPVISEDGKLEGIVTSWDITKAVACKINEL-- 482

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++++ ++ K + ED  +  A  ++ +H+IS L V+D   + IGIV 
Sbjct: 483 DEIITRDVKYVYEDEKIEHASSIMEKHSISALPVIDSEHRIIGIVT 528



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/70 (25%), Positives = 33/70 (47%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           EG +       L+ + V DVM +N   +  D  +  + +L+ +  +S L V+ +  K  G
Sbjct: 405 EGQLSYLLRSFLSHILVSDVMNRNFYTVSRDETIEHSSKLMVKECVSHLPVISEDGKLEG 464

Query: 329 IVHFLDLLRF 338
           IV   D+ + 
Sbjct: 465 IVTSWDITKA 474


>gi|319941891|ref|ZP_08016212.1| inosine-5'-monophosphate dehydrogenase [Sutterella wadsworthensis
           3_1_45B]
 gi|319804544|gb|EFW01414.1| inosine-5'-monophosphate dehydrogenase [Sutterella wadsworthensis
           3_1_45B]
          Length = 489

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +        ++  +    S V+      
Sbjct: 40  NIPMVSAAMDTVTEAKLAIALAQEGGVGFIHKNMTADQQAAEVAKVKRHESGVV---SEP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D I +  E R   + VV E   + G++T  D+     +   ++ V +VM 
Sbjct: 97  ITIGPEMLVGDVIALAREHRISGLPVVAEDGTVLGMVTNRDLRF---ETRMSVPVREVMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E   L  A  L+ +H +  ++VV    +  G++   D+ + 
Sbjct: 154 PRERLVTVHEGASLEEAKNLMHRHRLERVLVVTKDFRLAGLMTVKDITKA 203


>gi|282165657|ref|YP_003358042.1| inosine-5'-monophosphate dehydrogenase [Methanocella paludicola
           SANAE]
 gi|282157971|dbj|BAI63059.1| inosine-5'-monophosphate dehydrogenase [Methanocella paludicola
           SANAE]
          Length = 489

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 76/208 (36%), Gaps = 9/208 (4%)

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG---LAPTTSAIMQLAIGDAL 189
           + ++   PL  IT ++  +V   + +                   P  SA M       +
Sbjct: 2   FLKKLDAPL-GITFDDVLLVPSKSYVEPDHTDVKTRFSKNISLNVPIVSAAMDTVSEAEM 60

Query: 190 AIALLESRNFSENDFYVLHPG-GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           A+A+  +R       +   P   ++  +             +        +      ++E
Sbjct: 61  AVAI--AREGGIGVIHRNMPREMQVEEIQKVKRGEEILIRDVTTASPSQTVGAVWKTMTE 118

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           +    + ++ E  KL GII+  D+      D N   V +VM ++     E   +  A+ +
Sbjct: 119 QSISGIPII-ENGKLVGIISRRDVRPIVKADPNKKIV-EVMTRDVVTARESVKIDEAIDI 176

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +H +  L +++D    IGI+   +++
Sbjct: 177 MYEHKVERLPIINDKGSLIGIISMQNII 204


>gi|255017121|ref|ZP_05289247.1| inosine-monophosphate dehydrogenase [Listeria monocytogenes FSL
           F2-515]
          Length = 389

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 71/183 (38%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D +T+ ++DVM K N       T L  A Q+L++H I  L +VD+     G++  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITI 201

Query: 333 LDL 335
            D+
Sbjct: 202 KDI 204



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +      + + +++    +G  L  A  IL + R   + +VDE   LKG+IT  DI +  
Sbjct: 149 YSTVIKDVMTKENLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVI 208

Query: 277 H-------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIG 328
                   K    L+   V I N   +  + L+   +           +V+D     + G
Sbjct: 209 EFPNSAKDKHGRLLAAAAVGITNDTFVRVEKLIEAGVD---------AIVIDTAHGHSAG 259

Query: 329 IVH 331
           +++
Sbjct: 260 VIN 262


>gi|256811333|ref|YP_003128702.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256794533|gb|ACV25202.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 154

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/150 (26%), Positives = 56/150 (37%), Gaps = 34/150 (22%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
           +        +V     L D I I  E +     V+++  KL GII+E DI +      +D
Sbjct: 3   IKDVMKKPIVVYEDDDLEDVIKIFRENKISGAPVLNKDGKLVGIISESDIIKTIVTHDED 62

Query: 280 LN-------------------------------TLSVEDVMIKNPKVILEDTLLTVAMQL 308
           LN                                  V+D+M K   V   D  +  A +L
Sbjct: 63  LNLILPSPLDLIELPLKTALKIEEFMEDLKKALKTKVKDMMTKKVIVAKPDMTVNDAAKL 122

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +HNI  L VVDD    IGIV   DL+  
Sbjct: 123 MVEHNIKRLPVVDDEGNLIGIVTRGDLIEA 152



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + + K    + DA  ++ E     + VVD+   L GI+T GD+    
Sbjct: 102 MMTKKVIVAKPDMTVNDAAKLMVEHNIKRLPVVDDEGNLIGIVTRGDLIEAL 153


>gi|253699582|ref|YP_003020771.1| hypothetical protein GM21_0947 [Geobacter sp. M21]
 gi|251774432|gb|ACT17013.1| CBS domain containing protein [Geobacter sp. M21]
          Length = 216

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +     + +A+ ++ +K+   + VV+   KL GI+++ D+F+          
Sbjct: 6   RMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQASPSPATSLA 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               H  L  L+V+  M K+   + EDT L  A +++    I  L V+      +GI+  
Sbjct: 66  IWEIHDLLAKLTVDKTMAKDVITVTEDTPLEEAARVMVDRRIGGLPVM-KGDALVGIITE 124

Query: 333 LDLLRF 338
            DL + 
Sbjct: 125 SDLFQA 130



 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M  NP  I  D  +T A++L+    I  L VV+   K +GIV   DL + 
Sbjct: 3   VRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERNGKLVGIVSDRDLFQA 56



 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    PL +A  ++ ++R G + V+ +G  L GIITE D+F+  
Sbjct: 82  MAKDVITVTEDTPLEEAARVMVDRRIGGLPVM-KGDALVGIITESDLFQAL 131


>gi|219847332|ref|YP_002461765.1| putative signal transduction protein with CBS domains [Chloroflexus
           aggregans DSM 9485]
 gi|219541591|gb|ACL23329.1| putative signal transduction protein with CBS domains [Chloroflexus
           aggregans DSM 9485]
          Length = 149

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------F 273
             ++   V      + A   +  +    + VVD+   L GIIT  DI             
Sbjct: 11  MTENPVCVPPDFSALAAYERMRARGVRRMPVVDKQGNLVGIITRSDIEQAMSHPRDEEER 70

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R    +L   +V ++M  NP  I     +  A  ++ +  +S L VVD+  + +GI+   
Sbjct: 71  RLARFNLAGQTVAELMTPNPLTIASSDSIGKAAAMMVRARVSGLPVVDE-GRLVGIITES 129

Query: 334 DLLRF 338
           D+ R 
Sbjct: 130 DIFRL 134



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            T  V + M +NP  +  D     A + +R   +  + VVD     +GI+   D+ + 
Sbjct: 3   KTERVAEWMTENPVCVPPDFSALAAYERMRARGVRRMPVVDKQGNLVGIITRSDIEQA 60



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 20/86 (23%), Positives = 32/86 (37%), Gaps = 9/86 (10%)

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           A+   R+  E      +  G+     +          +   +     +  A  ++   R 
Sbjct: 60  AMSHPRDEEERRLARFNLAGQTVAELMT--------PNPLTIASSDSIGKAAAMMVRARV 111

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFH 277
             + VVDE  +L GIITE DIFR   
Sbjct: 112 SGLPVVDE-GRLVGIITESDIFRLVA 136


>gi|91778432|ref|YP_553640.1| signal-transduction protein [Burkholderia xenovorans LB400]
 gi|296159855|ref|ZP_06842676.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
 gi|91691092|gb|ABE34290.1| Signal-transduction protein containing CBS domains [Burkholderia
           xenovorans LB400]
 gi|295889838|gb|EFG69635.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
          Length = 147

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           V     + DAI +++EK  G + V D G  + GI+TE D  R      +      V D+M
Sbjct: 20  VGADDSVYDAIKLMAEKGIGALVVTD-GDSIAGIVTERDYARKVVLLDRSSKATPVRDIM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K  + +  D      M L+ +  +  L V+++  + +G+V   DL++
Sbjct: 79  SKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND-RLVGMVSIGDLVK 125



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L               ++  V+      D + +++E+R   + V+ E
Sbjct: 54  TERDYA--RKVVLLDRSSKATPVRDIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVI-E 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ +N 
Sbjct: 111 NDRLVGMVSIGDLVKNI 127



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +  D  +  A++L+ +  I  L+V D      GIV   D  R  ++
Sbjct: 19  TVGADDSVYDAIKLMAEKGIGALVVTDGD-SIAGIVTERDYARKVVL 64


>gi|116749348|ref|YP_846035.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698412|gb|ABK17600.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 223

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           +     +  A  ++   R   + V D    L G++T+ D+ + +               L
Sbjct: 14  ITPETSVFKAREMMDNHRISHLPVTDGKAHLVGLVTDRDLRQVWASPATTLSVHELTYVL 73

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L+V +VM +N      D  +  A  ++       L VV D  + +GI+   DL++
Sbjct: 74  QKLTVANVMTRNVVTATPDMHIERAALIIHDKKFGALPVVKDD-RLVGIITVTDLMQ 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            M      I  +T +  A +++  H IS L V D     +G+V   DL
Sbjct: 6   YMKTKLLTITPETSVFKAREMMDNHRISHLPVTDGKAHLVGLVTDRDL 53


>gi|225869479|ref|YP_002745427.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equi subsp.
           zooepidemicus]
 gi|225702755|emb|CAX00916.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equi subsp.
           zooepidemicus]
          Length = 495

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 47  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSIAEQAEEVRKVKRSENGVII 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 102 DPFFLTPEHKVAEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 158

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 159 EHMTSEQLVTAEVGTDLETAERILHEHRIEKLPLVDDNGRLSGLITIKDI 208


>gi|30020352|ref|NP_831983.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 14579]
 gi|218232021|ref|YP_002366963.1| transcriptional regulator, RpiR family [Bacillus cereus B4264]
 gi|228952606|ref|ZP_04114682.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229069792|ref|ZP_04203075.1| RpiR family transcriptional regulator [Bacillus cereus F65185]
 gi|229109705|ref|ZP_04239291.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-15]
 gi|229127662|ref|ZP_04256651.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|229144858|ref|ZP_04273255.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|229150488|ref|ZP_04278704.1| RpiR family transcriptional regulator [Bacillus cereus m1550]
 gi|229178633|ref|ZP_04305997.1| RpiR family transcriptional regulator [Bacillus cereus 172560W]
 gi|296502828|ref|YP_003664528.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
 gi|29895903|gb|AAP09184.1| Transcriptional regulator, RpiR family [Bacillus cereus ATCC 14579]
 gi|218159978|gb|ACK59970.1| transcriptional regulator, RpiR family [Bacillus cereus B4264]
 gi|228604791|gb|EEK62248.1| RpiR family transcriptional regulator [Bacillus cereus 172560W]
 gi|228632981|gb|EEK89594.1| RpiR family transcriptional regulator [Bacillus cereus m1550]
 gi|228638580|gb|EEK95013.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|228655739|gb|EEL11588.1| RpiR family transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|228673746|gb|EEL29004.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-15]
 gi|228713327|gb|EEL65219.1| RpiR family transcriptional regulator [Bacillus cereus F65185]
 gi|228807072|gb|EEM53615.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|296323880|gb|ADH06808.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|50085401|ref|YP_046911.1| hypothetical protein ACIAD2305 [Acinetobacter sp. ADP1]
 gi|49531377|emb|CAG69089.1| conserved hypothetical protein [Acinetobacter sp. ADP1]
          Length = 143

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 56/117 (47%), Gaps = 5/117 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
                +  +     +++AI+++++K  G + VV E + + GI++E D  R      +  N
Sbjct: 11  KREHVVYTISPDASVLEAISLMADKGIGAIVVV-EKESVVGILSERDYTRKVELMDRSSN 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  V ++M      + +   +   +QL+   ++  L VV+   K +G++   DL++ 
Sbjct: 70  STVVSEIMTPKVFTVDKSYSVEDCLQLMTDRHLRHLPVVEHD-KLLGLISIGDLVKA 125



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 35/85 (41%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+          +     S++M        V     + D + +++++    + VV 
Sbjct: 52  LSERDYTRKVELMDRSSNSTVVSEIMTPKVFT--VDKSYSVEDCLQLMTDRHLRHLPVV- 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E  KL G+I+ GD+ +   ++   L
Sbjct: 109 EHDKLLGLISIGDLVKAAMEEQRQL 133


>gi|15897070|ref|NP_341675.1| hypothetical protein SSO0110 [Sulfolobus solfataricus P2]
 gi|284173415|ref|ZP_06387384.1| hypothetical protein Ssol98_01997 [Sulfolobus solfataricus 98/2]
 gi|1707784|emb|CAA69582.1| orf c04012 [Sulfolobus solfataricus P2]
 gi|13813241|gb|AAK40465.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601725|gb|ACX91328.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 300

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 79/198 (39%), Gaps = 18/198 (9%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +  E         P+ + ++    GD   + + ++       +  L   G +  L   +
Sbjct: 97  DIKVENIEIIDITNPSANRVLLKVEGDLRKLKIGDAVRLGPTPYSRLVIEGLILHLDENS 156

Query: 221 SDVMHSGDSIPLVK----------------IGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +++     +  +                     L +A  I  ++      V+++ +K+ 
Sbjct: 157 KEIVVDVKRMISIPKEKVKNLISKKLIALKPETSLREASMIFYKEAIRGAPVINQDEKVV 216

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T  DI + F +   T  V D M  N   I E+  L  A++ +  +N+  L+V+D   
Sbjct: 217 GILTTADIIKAFFEGNYTAKVSDYMKTNVISINENEDLLDAIRKMIIYNVGRLLVLDSNN 276

Query: 325 KAIGIVHFLDLLR--FGI 340
           KA+GIV   D+LR   G+
Sbjct: 277 KAVGIVTRTDILRSIAGL 294


>gi|319407597|emb|CBI81247.1| inosine-5'-monophosphate dehydrogenase [Bartonella sp. 1-1C]
          Length = 499

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 64/175 (36%), Gaps = 11/175 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          + P  +   +            +   
Sbjct: 46  NLPLLSAAMDTVTESRLAIAMAQAGGLGVIH-RNMSPAEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFRNFHKDLNTLSVE 286
           +     L +A  ++       + VV+ G       +L GI+T  D+            + 
Sbjct: 105 IGPDATLEEAKDLMRSHSISGIPVVESGAKGKISGRLVGILTNRDVRFASDP---KQKIY 161

Query: 287 DVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++M   N   + E+  L  A  LL  H I  L+VVD+  + +G+V   D+ +  +
Sbjct: 162 ELMTHENLITVRENVQLDEAKYLLHHHRIEKLLVVDEQDRCVGLVTVKDIEKARL 216


>gi|260905404|ref|ZP_05913726.1| inosine-5'-monophosphate dehydrogenase [Brevibacterium linens BL2]
          Length = 508

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 62/173 (35%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        +   +         
Sbjct: 52  NIPLVSAAMDTVTESRMAIAMARIGGLGIIHRNLSMED--------QAAQVDYVKRSESG 103

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    +     L +   I  + R   + VVDE   L GI+T  D+      +  T +V
Sbjct: 104 MINDPLTITPEKTLEELDEICGKYRISGLPVVDENNVLLGIVTNRDLRFVTRSEFPTRTV 163

Query: 286 EDVMIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D M + P +   D      A +LL +H +  L +VD+     G++   D ++
Sbjct: 164 ADTMTRMPLITAPDGVSPEKAFELLAEHKVEKLPLVDENNVIKGLITVKDFVK 216


>gi|229029981|ref|ZP_04186047.1| RpiR family transcriptional regulator [Bacillus cereus AH1271]
 gi|228731329|gb|EEL82245.1| RpiR family transcriptional regulator [Bacillus cereus AH1271]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV+ ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKVLQDTS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVVIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAHIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|323357253|ref|YP_004223649.1| IMP dehydrogenase/GMP reductase [Microbacterium testaceum StLB037]
 gi|323273624|dbj|BAJ73769.1| IMP dehydrogenase/GMP reductase [Microbacterium testaceum StLB037]
          Length = 500

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 19/204 (9%)

Query: 142 IAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE--- 195
           I +T ++  ++  H D++                  P  S+ M       +AIA+     
Sbjct: 10  IGLTYDDVLLLPGHTDVIPSEADTSSRLTRRITVATPLLSSAMDTVTEARMAIAIARQGG 69

Query: 196 ----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
                RN S  D       G +  +    S ++ +  +         + +   + ++ R 
Sbjct: 70  IGIVHRNLSIED-----QAGIVDQVKRSESGMVSNPITTT---PDATVAEVDAMCAQYRI 121

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLR 310
             + VVD    L GIIT  D+      +  T  V+DVM K               +    
Sbjct: 122 SGLPVVDPDGVLVGIITNRDMRFVSGFERQTTLVKDVMTKEGLITGHVGIHANDVIATFA 181

Query: 311 QHNISVLMVVDDCQKAIGIVHFLD 334
           +H +  L +VDD  K  G++   D
Sbjct: 182 KHRVEKLPLVDDDGKLAGLITIKD 205



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 40/102 (39%), Gaps = 15/102 (14%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLK---GIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
             + +A   ++  R G + +V     ++   GI+    + R+          E  M+ NP
Sbjct: 53  DTVTEARMAIAIARQGGIGIVHRNLSIEDQAGIVD--QVKRS----------ESGMVSNP 100

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                D  +     +  Q+ IS L VVD     +GI+   D+
Sbjct: 101 ITTTPDATVAEVDAMCAQYRISGLPVVDPDGVLVGIITNRDM 142


>gi|229096761|ref|ZP_04227731.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-29]
 gi|229115741|ref|ZP_04245144.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228667726|gb|EEL23165.1| RpiR family transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228686603|gb|EEL40511.1| RpiR family transcriptional regulator [Bacillus cereus Rock3-29]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 74/191 (38%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEKAVRALQEA-NR 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T++ +II +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTKEAVIIAISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGACIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|149927601|ref|ZP_01915854.1| transcriptional regulator, RpiR family protein [Limnobacter sp.
           MED105]
 gi|149823655|gb|EDM82883.1| transcriptional regulator, RpiR family protein [Limnobacter sp.
           MED105]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 60/166 (36%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             + +L +      +     A + +      KGR+V  G+G SG +           G  
Sbjct: 101 NAIHTLRTFRNTAPAKPIDKATQLLAKTIEKKGRLVFYGVGNSGFVALDAEHKFFRMGCT 160

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +              M+ + D +I++S SG S +L      AR      IAIT+   S +
Sbjct: 161 AHAYSDGHLQIMAASMLNKADCLIIISNSGRSQDLLDATQIARAAGASTIAITASG-SPL 219

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A    +   +P +        +P  S ++ L + D LA  +     
Sbjct: 220 AQAVQVH--IPADHGEYYEQYSPMVSRLLHLCVVDVLATQVAMRLG 263


>gi|187925344|ref|YP_001896986.1| RpiR family transcriptional regulator [Burkholderia phytofirmans
           PsJN]
 gi|187716538|gb|ACD17762.1| transcriptional regulator, RpiR family [Burkholderia phytofirmans
           PsJN]
          Length = 281

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 60/163 (36%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L              AVE +     R+   G G SG     +       G PS  
Sbjct: 100 RTIGTLIEVRNSLSPDSVEAAVELLANAA-RIEFYGAGGSGIAAQDIQHKFFRLGMPSVA 158

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      +IAIT    S +A  
Sbjct: 159 YSDPHTYSMSAALLGPGDVVVTVSNTGRTRDIIEAARSALARGAKVIAIT-HGSSPLARV 217

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A I L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 218 ASICLFSNVVEENDVF--SPMTSRMSHLAIGDILAVGVALKRG 258


>gi|52424829|ref|YP_087966.1| inositol-5-monophosphate dehydrogenase [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306881|gb|AAU37381.1| GuaB protein [Mannheimia succiniciproducens MBEL55E]
          Length = 487

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    V+D+   L GIIT  D    F KDLN  +V +VM 
Sbjct: 98  VTVFPELSLGELAQLVKKNGFAGYPVIDQNDNLVGIITARDTR--FVKDLNK-TVAEVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       + L+  H +  ++VVDD  K  G++   D  + 
Sbjct: 155 PKEKLVTVKEGAKREDIIALMHSHRVEKVLVVDDNFKLKGMITVKDFQKA 204



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 20/62 (32%), Positives = 29/62 (46%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               ++VM   + +  VK G    D I ++   R   V VVD+  KLKG+IT  D  +  
Sbjct: 146 NKTVAEVMTPKEKLVTVKEGAKREDIIALMHSHRVEKVLVVDDNFKLKGMITVKDFQKAE 205

Query: 277 HK 278
            K
Sbjct: 206 QK 207


>gi|78061876|ref|YP_371784.1| signal-transduction protein [Burkholderia sp. 383]
 gi|77969761|gb|ABB11140.1| putative signal-transduction protein with CBS domains [Burkholderia
           sp. 383]
          Length = 153

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVK 127



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLVGLISIGDLVKSVIAD 132


>gi|27381185|ref|NP_772714.1| hypothetical protein blr6074 [Bradyrhizobium japonicum USDA 110]
 gi|27354352|dbj|BAC51339.1| blr6074 [Bradyrhizobium japonicum USDA 110]
          Length = 242

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 56/142 (39%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                   S+  V     +++A  I+ ++    + VVD+  KL G+++EGD  R      
Sbjct: 2   RAHQIMTRSVISVTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIRRSEIGT 61

Query: 281 ------------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                   +   V +VM  +P  I EDT L   + L+ ++N+  
Sbjct: 62  GRKRGRWLRFILGPGKSASDFVHEHGRKVSEVMTASPVTITEDTALAEIVDLMERNNVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VV      +GIV   +LL+ 
Sbjct: 122 LPVV-RGDMVVGIVSRANLLQA 142



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M ++   +  DT +  A  ++ + ++S L VVDD  K +G+V   D +R
Sbjct: 1   MRAHQIMTRSVISVTPDTSIVEAANIMLKRHVSGLTVVDDTGKLVGVVSEGDFIR 55


>gi|15669112|ref|NP_247917.1| hypothetical protein MJ_0922 [Methanocaldococcus jannaschii DSM
           2661]
 gi|2496138|sp|Q58332|Y922_METJA RecName: Full=Uncharacterized protein MJ0922
 gi|1591595|gb|AAB98926.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 138

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 7/106 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI 296
           +++A   + + +   + V+D+  K+ GI+T  DI  N  +D  TL  ++ DVM K+   I
Sbjct: 27  VVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVMTKDVITI 86

Query: 297 LEDTLLTVAMQLL-----RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ED  +  A++ +     ++  I+ L VVD   K +GI+   D++R
Sbjct: 87  HEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 29/56 (51%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + V+DVM KN         +  A + + ++ IS L V+DD  K IGIV   D+
Sbjct: 5   LKNIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDDENKVIGIVTTTDI 60



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITIL--SEKR---FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  +     +++AI  +  S K+      + VVD+  KL GII++GDI R   K
Sbjct: 79  MTKDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136


>gi|288939928|ref|YP_003442168.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
 gi|288895300|gb|ADC61136.1| cyclic nucleotide-binding protein [Allochromatium vinosum DSM 180]
          Length = 621

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 54/127 (42%), Gaps = 4/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT  +          +    +    + DA  I+SE     + ++D G+ L G+IT+ D+ 
Sbjct: 148 GTGLMTVQVRDMVQRAPIATRPETSIRDAARIMSEHHVSSLLIMD-GEHLAGMITDRDLR 206

Query: 274 -RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R     L     V  +M +    +  DTL   A+  + + N+  L VV +  + +G++ 
Sbjct: 207 NRCVAAGLATDQPVRAIMTEKLTTVDMDTLGFQALIAMTRLNVHHLPVV-ENGRVVGLIS 265

Query: 332 FLDLLRF 338
             D  RF
Sbjct: 266 STDFTRF 272



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 10/77 (12%)

Query: 268 TEGDIFRNFH---------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           T   + +              L T+ V D++ + P     +T +  A +++ +H++S L+
Sbjct: 130 TSRRLRKALDVVTESPSSGTGLMTVQVRDMVQRAPIATRPETSIRDAARIMSEHHVSSLL 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           ++D  +   G++   DL
Sbjct: 190 IMD-GEHLAGMITDRDL 205


>gi|258404196|ref|YP_003196938.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257796423|gb|ACV67360.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 140

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V++   +    ++  E  F  + VVD G  L+G+I++ D+ +N          
Sbjct: 7   MTKGVCTVQMDDFVRYVKSLFEEHEFHHLLVVD-GGMLQGVISDRDLLKNLSPFYDTPCE 65

Query: 277 -HKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            ++DL         +M +NP  +  +T +  A +LL +  IS L VV +  +  GIV + 
Sbjct: 66  QNRDLAILNKRAHQIMSRNPVTVTAETSVKDAFELLIEKRISCLPVVTESGRVAGIVTWK 125

Query: 334 DLLRF 338
           DL+R 
Sbjct: 126 DLIRA 130



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                     +   V     + DA  +L EKR  C+ VV E  ++ GI+T  D+ R   +
Sbjct: 74  NKRAHQIMSRNPVTVTAETSVKDAFELLIEKRISCLPVVTESGRVAGIVTWKDLIRAAFR 133

Query: 279 DLNT 282
           +++ 
Sbjct: 134 EVDA 137



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + D+M K    +  D  +     L  +H    L+VVD      G++   DLL+
Sbjct: 1   MRIIDIMTKGVCTVQMDDFVRYVKSLFEEHEFHHLLVVD-GGMLQGVISDRDLLK 54


>gi|237808685|ref|YP_002893125.1| DNA-binding transcriptional repressor RpiR [Tolumonas auensis DSM
           9187]
 gi|237500946|gb|ACQ93539.1| transcriptional regulator, RpiR family [Tolumonas auensis DSM 9187]
          Length = 285

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 77/191 (40%), Gaps = 6/191 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +++H +           +S+ Q   +      + +    S L      +F+ A + +  
Sbjct: 76  IHYNHSEVANLHSEIEPNDSSEQLLEKVFRTSIQAIEETLSILD---VSEFNRAADILFK 132

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            K  + + G+G S  +   L+  L   G  +     +        ++T DD +I +S SG
Sbjct: 133 AK-HIDLYGVGGSATVARDLSHKLLKIGIRAMVHDDSHTMLMSAALLTDDDAVIAISHSG 191

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            +  +   +  A R    +IAIT+  +S +  +A +VL    +        A   S I Q
Sbjct: 192 MTKAVIEPIKLAARNGAKVIAITNYAESPIVQNAHVVLNSTSQGSHLLGENA--ASRIAQ 249

Query: 183 LAIGDALAIAL 193
           L I DAL +A+
Sbjct: 250 LNILDALFVAI 260


>gi|320352191|ref|YP_004193530.1| inosine-5'-monophosphate dehydrogenase [Desulfobulbus propionicus
           DSM 2032]
 gi|320120693|gb|ADW16239.1| inosine-5'-monophosphate dehydrogenase [Desulfobulbus propionicus
           DSM 2032]
          Length = 487

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 41/172 (23%), Positives = 60/172 (34%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
            AP  SA M        AIA+            ++H    +         V  S      
Sbjct: 42  QAPLLSAAMDTVTEHQTAIAMAREGGIG-----IIHKNMSIEQQAKEVERVKKSESGMIA 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I+   R   + V+D G KL GI+T  D+       L    V DV
Sbjct: 97  DPITVSPYQSVAEVQQIMRTYRISGLPVID-GDKLVGIVTNRDLRFVSDDGLR---VNDV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  KN         L     LL +H I  L++VDD  +  G++   D+ +  
Sbjct: 153 MTSKNLVTAPVGIDLPHCKALLHEHRIEKLLIVDDNGRLKGLITIKDIEKIK 204


>gi|255631750|gb|ACU16242.1| unknown [Glycine max]
          Length = 205

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV  D  + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAIAGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+    I  + V+D+    +G+V   D++R 
Sbjct: 133 DIMTEENKLITVTPDTKVLQAMQLMTDKRIRHIPVIDEKGM-VGMVSIGDVVRA 185



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++KR   + V+D
Sbjct: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDKRIRHIPVID 169

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
           E   + G+++ GD+ R   ++   
Sbjct: 170 EKG-MVGMVSIGDVVRAVVREHRQ 192


>gi|239826078|ref|YP_002948702.1| hypothetical protein GWCH70_0527 [Geobacillus sp. WCH70]
 gi|239806371|gb|ACS23436.1| CBS domain containing protein [Geobacillus sp. WCH70]
          Length = 147

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
              ++  V     + +A  I+S+K  G + VV E  ++KG+IT+ DI        KD  +
Sbjct: 12  MTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDITLRTSAQGKDPAS 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V ++M         +  +  A  ++ QH I  L +V +  +  GIV   D+
Sbjct: 71  TPVSEIMTNRVVTGTPNMSVQEAASVMAQHQIRRLPIV-ENNQIQGIVALGDI 122



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + N   V+DVM KN   +  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 2   NNNNNKVQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 58


>gi|113460448|ref|YP_718510.1| signal-transduction protein [Haemophilus somnus 129PT]
 gi|112822491|gb|ABI24580.1| conserved hypothetical protein [Haemophilus somnus 129PT]
          Length = 648

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K          +  +   I LV     L  A   + E+R     V+ +  KL GII + D
Sbjct: 171 KNQNDIFMKKVIDIANPKIALVDTNTTLQQAAIRMCEQRRSSALVM-QQNKLIGIIHDRD 229

Query: 272 IFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAI 327
           + +       D+NTL V ++M  NP VI  D L+  A+ ++ QHNI  L V VDD  K  
Sbjct: 230 MTKKVVAQGLDVNTL-VTEIMNINPPVIRGDELVLQAISMMMQHNIRSLPVIVDD--KVQ 286

Query: 328 GIVHFLDLLR 337
           GI+   DL++
Sbjct: 287 GILTATDLVK 296


>gi|307314237|ref|ZP_07593846.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti BL225C]
 gi|306899104|gb|EFN29745.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti BL225C]
          Length = 223

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 24/128 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------------NFHK 278
                +  A  ++ +     V VVD+  +L G+I+EGD+ R                   
Sbjct: 15  SPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIRRTELCSGASVLMADMAIDP 74

Query: 279 DLN--------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D          +  V DVM  NP  I E+  L     L+++  I  + V+    + +GIV
Sbjct: 75  DDRANAFIRRCSWRVGDVMTANPVTIEEEAPLARVAGLMQERGIKRIPVM-RDGELVGIV 133

Query: 331 HFLDLLRF 338
              DLL+ 
Sbjct: 134 SRADLLQA 141



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM      +  D  +  A +L+  H++S + VVDD  + +G++   DL+R
Sbjct: 3   VKDVMTTKVVKLSPDNSVRQAAKLMFDHHVSGVPVVDDDGRLLGVISEGDLIR 55


>gi|228958532|ref|ZP_04120252.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229044009|ref|ZP_04191698.1| RpiR family transcriptional regulator [Bacillus cereus AH676]
 gi|228725290|gb|EEL76558.1| RpiR family transcriptional regulator [Bacillus cereus AH676]
 gi|228801159|gb|EEM48056.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar pakistani str. T13001]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|312136468|ref|YP_004003805.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224187|gb|ADP77043.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 267

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS 284
              +   +     + +A+  + + +   + VVD  +KL GI+TE DI  +        L 
Sbjct: 7   MSTNPVTINKNKNIAEALKSMEKNKVSSLLVVDNNKKLVGIVTEKDIAGKLLSSKYENLP 66

Query: 285 -----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                V   M K+P  +  +  +  A  ++ ++ IS L VV +  + +GI+   DLL
Sbjct: 67  PSHIYVSTAMTKDPITVSPNITVGKAADIMLENRISNLPVV-ENGELVGIITKTDLL 122



 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 45/114 (39%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLS 284
                  V     +  A  I+ E R   + VV E  +L GIIT+ D+      K    L 
Sbjct: 76  MTKDPITVSPNITVGKAADIMLENRISNLPVV-ENGELVGIITKTDLLDVCKCKPYRELK 134

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      I     L  A +++    I  L V+DD    +GI+   D+ + 
Sbjct: 135 VKDAMSTEIITIGPTDSLLHARRIMVDTRIGRLPVMDDD-ILVGIITARDVAKA 187



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 32/51 (62%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++ +M  NP  I ++  +  A++ + ++ +S L+VVD+ +K +GIV   D+
Sbjct: 3   IKYLMSTNPVTINKNKNIAEALKSMEKNKVSSLLVVDNNKKLVGIVTEKDI 53



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               I  +     L+ A  I+ + R G + V+D+   L GIIT  D+ +           
Sbjct: 139 MSTEIITIGPTDSLLHARRIMVDTRIGRLPVMDDD-ILVGIITARDVAKAIIAYRKIVPD 197

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  L V+D+M++N + +  +  ++   + L  +      V++D     G++   
Sbjct: 198 KYKSSRIRNLLVQDIMVQNVRTVSANLSISEVTEKLISYGFGGFPVMNDE--LEGLITKT 255

Query: 334 DLL 336
           D+L
Sbjct: 256 DIL 258


>gi|228939397|ref|ZP_04101987.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228972276|ref|ZP_04132889.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228978890|ref|ZP_04139257.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           Bt407]
 gi|228780847|gb|EEM29058.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           Bt407]
 gi|228787460|gb|EEM35426.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228820292|gb|EEM66327.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|326939968|gb|AEA15864.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 284

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|148553329|ref|YP_001260911.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas wittichii RW1]
 gi|148498519|gb|ABQ66773.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas wittichii RW1]
          Length = 485

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPILSSAMDTVTEADMAIVMAQLGGLG-----VLHRNLTVEEQAAAVRAVKRFESGMVV 93

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  +++  +   + VV+   KL GI+T  D+    + +     V ++
Sbjct: 94  NPITMQPHQTLADAHELMARNKISGIPVVEADGKLVGILTNRDVRFAENPN---QPVSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   N  V+        A + L Q  I  L+VVDD  + +G++   D+ + 
Sbjct: 151 MTSQNLAVVRSGVSQEEARRTLHQRRIEKLLVVDDAYRCVGLITVKDMEKA 201


>gi|290955610|ref|YP_003486792.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
 gi|260645136|emb|CBG68222.1| hypothetical protein SCAB_10481 [Streptomyces scabiei 87.22]
          Length = 244

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 51/128 (39%), Gaps = 26/128 (20%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---------------------- 273
             P  +   +L+  R   + V+D+ +K+ G+I+E D+                       
Sbjct: 20  DTPFKEVARLLAGHRISGLPVIDDDEKVIGVISETDLMVRQARTPDPYGQPRHRFPFAVL 79

Query: 274 ----RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
               R         +   +M + P  +  D  +  A + + +H +  L VVD+ ++ +GI
Sbjct: 80  TRAARRQAVKAEARTAGRLMTEPPVTVHADDTIVEAARTMARHRVERLPVVDEEERLVGI 139

Query: 330 VHFLDLLR 337
           V   DLL+
Sbjct: 140 VCRRDLLQ 147



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 27/57 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    V  VM  +      DT      +LL  H IS L V+DD +K IG++   DL+
Sbjct: 1   MKHDKVGSVMTTDVVRAEYDTPFKEVARLLAGHRISGLPVIDDDEKVIGVISETDLM 57



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 37/90 (41%), Gaps = 3/90 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F VL    +   +   A          P+ V     +++A   ++  R   + VVDE ++
Sbjct: 76  FAVLTRAARRQAVKAEARTAGRLMTEPPVTVHADDTIVEAARTMARHRVERLPVVDEEER 135

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           L GI+   D+ + F +      +  V+ ++
Sbjct: 136 LVGIVCRRDLLQVFLR--PDEEIRSVVTRD 163


>gi|75761108|ref|ZP_00741103.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74491400|gb|EAO54621.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 263

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 71/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 59  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 114

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++++ ++I +S SGS+  
Sbjct: 115 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKG 174

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 175 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 232

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 233 DTLYVGLSLQR 243


>gi|255319571|ref|ZP_05360784.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262379869|ref|ZP_06073025.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
 gi|255303369|gb|EET82573.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262299326|gb|EEY87239.1| CBS domain pair family protein [Acinetobacter radioresistens SH164]
          Length = 143

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 60/127 (47%), Gaps = 7/127 (5%)

Query: 217 FVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               S V+H+     +  +     +++AI++++ K  G + V DE  ++ GI++E D  R
Sbjct: 1   MTTVSQVLHNKTEKAIFTISPEATVLEAISLMANKGIGALIVTDEQ-RVVGILSERDYTR 59

Query: 275 N---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +     +V ++M      +  +  +   +QL+   ++  L V++D  + +G++ 
Sbjct: 60  KVALMERSSYNTTVSEIMTNKVLTVGLNNTVEDCLQLMTDRHLRHLPVLEDE-RLVGLIS 118

Query: 332 FLDLLRF 338
             DL++ 
Sbjct: 119 IGDLVKA 125



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/83 (15%), Positives = 35/83 (42%), Gaps = 3/83 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+        +       +      + +  V +   + D + +++++    + V+ 
Sbjct: 52  LSERDYT--RKVALMERSSYNTTVSEIMTNKVLTVGLNNTVEDCLQLMTDRHLRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLN 281
           E ++L G+I+ GD+ +   +D  
Sbjct: 109 EDERLVGLISIGDLVKAAMEDQR 131


>gi|212224081|ref|YP_002307317.1| hypothetical protein TON_0932 [Thermococcus onnurineus NA1]
 gi|212009038|gb|ACJ16420.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 181

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 50/115 (43%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
                +VK    +     ILS  + G   VV +  ++ GIIT+ DI        +D   +
Sbjct: 12  KRKAVIVKPDDTVHRIARILSRNKVGSAVVV-KDDEIVGIITDRDILDKVVAKGRDPKDV 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE+VM KNP  I +D  +  A+  +    I  L+V     K IG V   DLL  
Sbjct: 71  KVEEVMTKNPVTIEDDYEVQDAIDRMMDKGIRRLLVT-RLGKPIGFVTAADLLAA 124


>gi|94496674|ref|ZP_01303250.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
 gi|94424034|gb|EAT09059.1| hypothetical protein SKA58_18257 [Sphingomonas sp. SKA58]
          Length = 183

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 61/134 (45%), Gaps = 5/134 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G +       A+ +   G+ +  V+    ++ A+ +L+++R GCV VV    ++ GI +E
Sbjct: 35  GEQGEQAMTIATILQRKGNDVIQVEPSDSVLSAVRLLADQRIGCVPVV-ANGQVVGIFSE 93

Query: 270 GDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            D+     +D       SV +VM      I E T +   + L+ +  I  L VV      
Sbjct: 94  RDLVYRVAQDGPSALDHSVGEVMTAPAITIDEQTSVMQGLSLMTKRRIRHLPVV-VDGAL 152

Query: 327 IGIVHFLDLLRFGI 340
            G++   DL++F I
Sbjct: 153 AGMISIGDLVKFRI 166


>gi|331268732|ref|YP_004395224.1| CBS domain-containing protein [Clostridium botulinum BKT015925]
 gi|329125282|gb|AEB75227.1| CBS domain protein, putative [Clostridium botulinum BKT015925]
          Length = 142

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
              ++  +     +  A  ++SE   G + V   G+++ GI+T+ DI        K+++ 
Sbjct: 7   MTKTVATINPEDTVERAAQMMSEYNVGSIPVC-RGEEVVGIVTDRDITLRSSAQGKNVHQ 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V+D+M  NP +      +    +L+ +  I  L VV+D  K +GIV   DL
Sbjct: 66  QKVKDIMSSNPVIANPSMDVNEVARLMGERQIRRLPVVEDD-KVVGIVALGDL 117



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M K    I  +  +  A Q++ ++N+  + V    ++ +GIV   D+ 
Sbjct: 3   VKNIMTKTVATINPEDTVERAAQMMSEYNVGSIPVC-RGEEVVGIVTDRDIT 53


>gi|170737907|ref|YP_001779167.1| signal-transduction protein [Burkholderia cenocepacia MC0-3]
 gi|169820095|gb|ACA94677.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia MC0-3]
          Length = 153

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKIVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKIVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLVGLISIGDLVKSVIAD 132


>gi|289192110|ref|YP_003458051.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938560|gb|ADC69315.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 154

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 54/150 (36%), Gaps = 34/150 (22%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------ 276
           +        +V     LID I +  E +     V+++  KL GII+E DI +        
Sbjct: 3   IKDIMKKPIVVYEDDDLIDVIKLFRENKISGAPVLNKDGKLVGIISESDIVKTIVTHNED 62

Query: 277 ----------------------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                        K+     V DVM +   V   D  +  A +L
Sbjct: 63  LNLILPSPLDLIELPLRTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKL 122

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++NI  L VVDD    IGIV   DL+  
Sbjct: 123 MVENNIKRLPVVDDEGNLIGIVTRGDLIEA 152



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + + K    + DA  ++ E     + VVD+   L GI+T GD+    
Sbjct: 103 MTRKVIVAKPDMTINDAAKLMVENNIKRLPVVDDEGNLIGIVTRGDLIEAL 153


>gi|83816083|ref|YP_446538.1| CBS domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83757477|gb|ABC45590.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
          Length = 229

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-- 277
           A   +H   ++        + D I  ++E   G + VV     + GI TE D  R     
Sbjct: 83  AKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSI-VVTADGAIAGIFTERDHMRKMALE 141

Query: 278 -KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     +V+ VM ++   +     L  A+  +R      L VVD   +  GI+   D +
Sbjct: 142 GRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVDADGQLSGIISMRDCM 201

Query: 337 R 337
           R
Sbjct: 202 R 202



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   +      G      +      + +  V     L DA+  + + +   + VVD
Sbjct: 129 FTERD--HMRKMALEGRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVD 186

Query: 259 EGQKLKGIITEGDIFRNFHK 278
              +L GII+  D  R   +
Sbjct: 187 ADGQLSGIISMRDCMRQLSE 206


>gi|239617566|ref|YP_002940888.1| transcriptional regulator, RpiR family [Kosmotoga olearia TBF
           19.5.1]
 gi|239506397|gb|ACR79884.1| transcriptional regulator, RpiR family [Kosmotoga olearia TBF
           19.5.1]
          Length = 283

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 69/193 (35%), Gaps = 13/193 (6%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
             +  S +KN   Q  +  I      +S                 VEKI   +  ++I+G
Sbjct: 91  NSRDLSSLKNYVAQRHIDVIKNTSEFISE----------EILEACVEKILTART-ILISG 139

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G SG+            G      H A         +   D+++ +S SGS+ E+  I 
Sbjct: 140 VGASGNTAHDAFYKFMRIGLNCKTSHDAHIQAMIASELREGDVLLAISQSGSTLEIVDIA 199

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             AR+    +IAIT   +S +A  A  VL  P        G     S I QL + + L  
Sbjct: 200 DIARKGGATVIAITGYARSPLARFAHHVLLTPTRESPFESGALR--SKIAQLYVLELLFT 257

Query: 192 ALLESRNFSENDF 204
           A+          F
Sbjct: 258 AVFHRMEEKGRKF 270


>gi|148545482|ref|YP_001265584.1| CBS domain-containing protein [Pseudomonas putida F1]
 gi|148509540|gb|ABQ76400.1| CBS domain containing protein [Pseudomonas putida F1]
          Length = 145

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 ++ +      V        ++DA+ +L+EK  G + VV EG ++ GI++E D  
Sbjct: 1   MKTVEQILKTKSQHQTVYTIGPDDSVLDALKLLAEKNIGALPVV-EGGQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VVD+  + +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVDPKQKLDFCMNLMTDRHLRHLPVVDN-GRLLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|116747758|ref|YP_844445.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696822|gb|ABK16010.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 230

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 59/128 (46%), Gaps = 13/128 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              ++  ++    +  A++++ E +   + VV    KL G++++ D+ R    D      
Sbjct: 7   MSKTVVTIEEDDSMQHAMSLMKEHKIRMLPVV-ARGKLVGVVSDTDLKRASASDATTLDM 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 ++ + V+D+M K P  + ++  +    +LL +  IS   V+DD    +G++   
Sbjct: 66  HELLYLISKIKVQDIMTKTPITVSQNFTVEETAELLMRKKISGCPVLDDDGLVVGVITRD 125

Query: 334 DLLRFGII 341
           DL +  I+
Sbjct: 126 DLFKVLIM 133



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M K    I ED  +  AM L+++H I +L VV    K +G+V   DL R 
Sbjct: 3   VKNWMSKTVVTIEEDDSMQHAMSLMKEHKIRMLPVV-ARGKLVGVVSDTDLKRA 55



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 21/58 (36%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                     +   V     + +   +L  K+     V+D+   + G+IT  D+F+  
Sbjct: 74  KIKVQDIMTKTPITVSQNFTVEETAELLMRKKISGCPVLDDDGLVVGVITRDDLFKVL 131


>gi|58696722|ref|ZP_00372267.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila simulans]
 gi|58537090|gb|EAL60210.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila simulans]
          Length = 494

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 37  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 93

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +AI+++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 94  ITISPDKTVAEAISLMREHNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNVKVSEVMT 151

Query: 291 KN-PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E       AM+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 152 KDKLVTVREQGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 201


>gi|288932598|ref|YP_003436658.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
 gi|288894846|gb|ADC66383.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
          Length = 278

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 6/95 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
            I +  +     V VV +  KL GIIT  DI R   +D     V  +M  NP  +  DT 
Sbjct: 23  VIELFKKHGISAVPVV-KDGKLVGIITRKDILRKVEED----QVAFLMTPNPTTVTPDTD 77

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L    ++L   +   L VV +  K +GI+   D++
Sbjct: 78  LKEVARILLDTHFRRLPVV-ENGKLVGIITVRDII 111



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     L +   IL +  F  + VV E  KL GIIT  DI     +      V
Sbjct: 65  MTPNPTTVTPDTDLKEVARILLDTHFRRLPVV-ENGKLVGIITVRDIIEKISEMGIDKPV 123

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +D +  N   + ++T L VA +++R  N+    V+DD    +G++
Sbjct: 124 KDFVNPNAVCVWQETPLNVAGEIMRLANVEFCPVLDDNASIVGVI 168



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +DVM ++   I   +T     ++L ++H IS + VV    K +GI+   D+LR 
Sbjct: 1   MKAKDVMTEDVIFIELPNTR-DKVIELFKKHGISAVPVV-KDGKLVGIITRKDILRK 55



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 7/50 (14%), Positives = 17/50 (34%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V     +  A   +       + V+D   ++ GI+ + ++ R  
Sbjct: 227 MKKAVFVYPQTSVSKAAKEMVRNDLDFIPVIDANGRVVGILPDKNLLRVL 276



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 46/148 (31%), Gaps = 38/148 (25%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII------TEGDIFRNFHK-- 278
             +   V    PL  A  I+         V+D+   + G+I      TE  I        
Sbjct: 128 NPNAVCVWQETPLNVAGEIMRLANVEFCPVLDDNASIVGVIDEKILLTETLIEEFLESTQ 187

Query: 279 -----------------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                                         L     +  M K    +   T ++ A + +
Sbjct: 188 YSSSSDFDDAWSWESIRDYSVKYFEVSVLKLPKEPAKKFM-KKAVFVYPQTSVSKAAKEM 246

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++++  + V+D   + +GI+   +LLR
Sbjct: 247 VRNDLDFIPVIDANGRVVGILPDKNLLR 274


>gi|113460566|ref|YP_718630.1| inosine 5'-monophosphate dehydrogenase [Haemophilus somnus 129PT]
 gi|112822609|gb|ABI24698.1| inosine-5'-monophosphate dehydrogenase [Haemophilus somnus 129PT]
          Length = 487

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEAKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +  +  F    VVDE + L GIIT  D    F  DLN  +V D M 
Sbjct: 98  VTVSPTMTLTELAELAKKNGFAGYPVVDEQKGLVGIITGRDTR--FVSDLNK-TVADFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E         L+ +H +  ++VVDD  K  G++   D  + 
Sbjct: 155 PKDRLVTVKEGATREEIFHLMHEHRVEKVLVVDDSFKLKGMITLKDYQKA 204


>gi|312136467|ref|YP_004003804.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224186|gb|ADP77042.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 279

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
             D + +V+    +  A  ++ +     + V++E ++L GI++E DI             
Sbjct: 7   MNDEVIVVRENDSISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIGGPAWKR 66

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + V+ +M KNP  +  +  +  A  L+ + +IS L VV +  K +GIV   DL+R
Sbjct: 67  RPIDNILVKRIMTKNPVTVSPNEDIKDAADLMLRKDISALPVV-EDGKILGIVTKTDLVR 125

Query: 338 F 338
            
Sbjct: 126 I 126



 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
               +  V     L     +L +     V VV  G++  GIIT  DI             
Sbjct: 141 MSKDVVTVNENTTLSHVAKLLDKNNISRV-VVTAGKEPIGIITATDILFAKLDKPSTGVA 199

Query: 273 -------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                         +   + ++TL+  D+M  +   I +D  L+ A +++ ++ I  L V
Sbjct: 200 TEKIFFVRVRPYKKKKRVRLISTLTAGDIMTDDLITINQDFDLSKAAKIMIKNKIGSLPV 259

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +DD  K +GIV   D++R 
Sbjct: 260 IDDDGKLVGIVTKTDIIRA 278



 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-S 284
              +   V     + DA  ++  K    + VV E  K+ GI+T+ D+ R + +       
Sbjct: 78  MTKNPVTVSPNEDIKDAADLMLRKDISALPVV-EDGKILGIVTKTDLVRIYSEKFKGRYK 136

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V D+M K+   + E+T L+   +LL ++NIS  +VV   ++ IGI+   D+L   +
Sbjct: 137 VADLMSKDVVTVNENTTLSHVAKLLDKNNISR-VVVTAGKEPIGIITATDILFAKL 191



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 36/60 (60%), Gaps = 3/60 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD---LLRFG 339
           + +E++M     V+ E+  ++ A  L+ +++IS L V+++ ++ +GI+   D   LL+ G
Sbjct: 1   MKIEEIMNDEVIVVRENDSISRARNLMLKNDISHLPVINEDEELVGILSETDIASLLKIG 60



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 50/138 (36%), Gaps = 9/138 (6%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPT---TSAIMQLAIGDALAIALLESRNFS 200
           +T    + ++  A ++            G  P    T+  +  A  D  +  +   + F 
Sbjct: 146 VTVNENTTLSHVAKLLDKNNISRVVVTAGKEPIGIITATDILFAKLDKPSTGVATEKIF- 204

Query: 201 ENDFYVLHPGGKLGTLF--VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
              F  + P  K   +      +      D +  +     L  A  I+ + + G + V+D
Sbjct: 205 ---FVRVRPYKKKKRVRLISTLTAGDIMTDDLITINQDFDLSKAAKIMIKNKIGSLPVID 261

Query: 259 EGQKLKGIITEGDIFRNF 276
           +  KL GI+T+ DI R  
Sbjct: 262 DDGKLVGIVTKTDIIRAI 279


>gi|150401183|ref|YP_001324949.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013886|gb|ABR56337.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 302

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 2/128 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLK-GIIT 268
           G +    +    ++H+   +  +K    + +A  +L  K    V +V DE  +L  GIIT
Sbjct: 164 GVMSVPNIPVESILHNKKEMIFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIIT 223

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI ++  + L   +V+ +M+K+   I     +  A++ + +H +  L+ V++  K  G
Sbjct: 224 LHDIAKSLAEGLENGTVDKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEG 283

Query: 329 IVHFLDLL 336
           I+   D++
Sbjct: 284 IITRTDIM 291



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAI-GIVHFLDLLR 337
             +     +  A +LL   NI  + +V D+  + + GI+   D+ +
Sbjct: 184 IFLKPTATIREASKLLYSKNIHGVPIVSDETNQLLEGIITLHDIAK 229



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                  +  +     + DAI  + + + G +  V+E  K++GIIT  DI    +
Sbjct: 241 DKIMVKDVITISTKDKIFDAIEKMDKHKVGRLIAVNEDNKVEGIITRTDIMDLLN 295


>gi|168024159|ref|XP_001764604.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684182|gb|EDQ70586.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 176

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 30/153 (19%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
               D M     +        + +A+ +L ++R   + VVD+   L G++++ D+     
Sbjct: 1   YTVGDFMTPMTELYCATENTTIDEALEVLVDRRITGMPVVDDTGALVGVVSDYDLLALDS 60

Query: 274 -----------------------RNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQ 307
                                  +   K L   N  ++ DVM  +P V+ + T L  A +
Sbjct: 61  ISGWQRQPETSLFPEAGRTWKAFKEIQKLLVKTNGKTIGDVMTPSPLVVRKQTNLEDAAK 120

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +L       L VVD   K +G++   +++R  +
Sbjct: 121 VLLDTKFRRLPVVDQDGKLVGLLTRGNVVRAAL 153


>gi|172065495|ref|YP_001816207.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
 gi|171997737|gb|ACB68654.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MC40-6]
          Length = 230

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 56/138 (40%), Gaps = 26/138 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +        + +   +L+E     V V+D   KL GI++EGD+ R      +    
Sbjct: 7   MTTPVIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVRRVEIGTHARRR 66

Query: 282 ---------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                                + +V+D+M  +   + EDT L+   +LL +H I  + VV
Sbjct: 67  SWWLELLASTRELASEYVKEHSQTVKDLMSVDVVTVAEDTPLSEVAELLERHRIKRVPVV 126

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D+  K  G+V   DL+R 
Sbjct: 127 DN-GKVAGLVSRADLVRA 143



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM         +  +    +LL +H+IS + V+D   K IGIV   DL+R
Sbjct: 1   MRARDVMTTPVIFASPEMSVQETAKLLAEHSISAVPVIDAEGKLIGIVSEGDLVR 55



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           V    PL +   +L   R   V VVD   K+ G+++  D+ R    D +  
Sbjct: 102 VAEDTPLSEVAELLERHRIKRVPVVD-NGKVAGLVSRADLVRALASDTHDK 151


>gi|295399685|ref|ZP_06809666.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312111796|ref|YP_003990112.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294978088|gb|EFG53685.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311216897|gb|ADP75501.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 139

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMI 290
                 + +A   + +   G + +VD   +L G+IT+ D+       K   +  V +VM 
Sbjct: 15  CTPVDNVYEAAVKMRDFNVGAIPIVD-HGQLIGMITDRDLVVRGIAAKRPGSTPVTEVMS 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                I  D  +  A + + +H I  L VV +  + +GIV   DL
Sbjct: 74  DKLITIAPDASVQEAAKKMAEHQIRRLPVV-EHGRLVGIVSLGDL 117



 Score = 44.5 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V +VM  + +       +  A   +R  N+  + +VD   + IG++   DL+  GI
Sbjct: 2   QTVHEVMTTDVEYCTPVDNVYEAAVKMRDFNVGAIPIVDH-GQLIGMITDRDLVVRGI 58



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 26/69 (37%), Gaps = 1/69 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G                D +  +     + +A   ++E +   + VV E  +L GI++ G
Sbjct: 57  GIAAKRPGSTPVTEVMSDKLITIAPDASVQEAAKKMAEHQIRRLPVV-EHGRLVGIVSLG 115

Query: 271 DIFRNFHKD 279
           D+  N   D
Sbjct: 116 DLAVNRDSD 124


>gi|291518660|emb|CBK73881.1| inosine-5'-monophosphate dehydrogenase [Butyrivibrio fibrisolvens
           16/4]
          Length = 485

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 60/180 (33%), Gaps = 11/180 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L            P  SA M       +AIA+            ++H    +      
Sbjct: 28  INLHTHLTKKIELNIPMMSAAMDTVTESRMAIAMARQGGIG-----IIHKNMSIEQQAEE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +            L +A  ++ + R   V +  E   L GIIT  D+   
Sbjct: 83  VDKVKRSENGVITDPFFLGPDNTLAEANELMGKFRISGVPITKEDGTLIGIITNRDLK-- 140

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F  D +    E +  +      E   L  A ++L +     L +VDD  K  G++   D+
Sbjct: 141 FETDFSKKISESMTSEGLVTAKEGISLEEAKEILGKSRKEKLPIVDDNFKLKGLITIKDI 200


>gi|326317834|ref|YP_004235506.1| CBS domain-containing protein [Acidovorax avenae subsp. avenae ATCC
           19860]
 gi|323374670|gb|ADX46939.1| CBS domain containing protein [Acidovorax avenae subsp. avenae ATCC
           19860]
          Length = 149

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     ++DA+ ++++K  G + V+D G+ + GI+TE D  R      +      V DVM
Sbjct: 19  IAPSDSMLDALRLMADKGIGALLVMD-GKSIAGIVTERDYARKVALLGRTSGDTRVADVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  + +         + L+ ++ +  L VV++    +G++   DL++
Sbjct: 78  TRAVRFVRPVQTSGQCLALMSENRLRHLPVVEEDGTLVGLISIGDLVK 125



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        LG              ++  V+        + ++SE R   + VV+E
Sbjct: 53  TERDYA--RKVALLGRTSGDTRVADVMTRAVRFVRPVQTSGQCLALMSENRLRHLPVVEE 110

Query: 260 GQKLKGIITEGDIFRNF 276
              L G+I+ GD+ ++ 
Sbjct: 111 DGTLVGLISIGDLVKDV 127



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 11/40 (27%), Positives = 18/40 (45%), Gaps = 1/40 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            I     +  A++L+    I  L+V+D  +   GIV   D
Sbjct: 18  TIAPSDSMLDALRLMADKGIGALLVMD-GKSIAGIVTERD 56


>gi|145591177|ref|YP_001153179.1| CBS domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282945|gb|ABP50527.1| CBS domain containing protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 689

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 2/90 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     L +A+ ++++   G + +V  G KL G+++E D+ +   + ++ +  V  VM  
Sbjct: 583 ISPETTLKEAVDLMAKNNIGFLPIV-SGGKLVGVLSESDVLKLATRGIDLSAPVATVMNS 641

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            P  I +D  L  A +L+ +HNI  L VVD
Sbjct: 642 KPITIGKDATLRDAAELMVKHNIRHLPVVD 671



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 51/118 (43%), Gaps = 10/118 (8%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------FRNFHKDLN 281
            +P ++   P+ +    L +     V +  +G ++ GI+   ++          F K + 
Sbjct: 509 KVPCIQADHPVTEVFVALEQYNVRAVPIC-KGSEVVGIVEARELINEALGLKSAFKKKVA 567

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              SV D   +    I  +T L  A+ L+ ++NI  L +V    K +G++   D+L+ 
Sbjct: 568 LRFSVADAAPRELMTISPETTLKEAVDLMAKNNIGFLPIV-SGGKLVGVLSESDVLKL 624


>gi|66804789|ref|XP_636127.1| hypothetical protein DDB_G0289609 [Dictyostelium discoideum AX4]
 gi|74852157|sp|Q54H97|Y8960_DICDI RecName: Full=CBS domain-containing protein DDB_G0289609
 gi|60464476|gb|EAL62622.1| hypothetical protein DDB_G0289609 [Dictyostelium discoideum AX4]
          Length = 145

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------------KDL 280
           + +   L  A+  L+      + VVD    LKGIIT+ D+                 + L
Sbjct: 16  INLDTTLDVALKSLNANSIHRLPVVDNDGNLKGIITDRDLRLATDSPFLPENNEDRLEKL 75

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V  +M +NP  I + + +  A +L+R  N+  L V+D   + IG+V   DLL
Sbjct: 76  RLHKVSSIMKQNPVTIEDFSPVVEAAKLMRVTNVGGLPVLDKKGRLIGMVTRSDLL 131



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 22/42 (52%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            P+++A  ++     G + V+D+  +L G++T  D+     K
Sbjct: 95  SPVVEAAKLMRVTNVGGLPVLDKKGRLIGMVTRSDLLDLLIK 136


>gi|295097906|emb|CBK86996.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 282

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+V+TGIG SG +       L   G  + 
Sbjct: 104 KENVAAMHATLDVNTEEKLLESVAMLRDAR-RIVLTGIGASGLVARNFGWKLTKIGYNAI 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  DDL++ +S+SG   E+      A R    ++AIT  + + +  
Sbjct: 163 VEQDMHALLATVQAMDPDDLLLAISYSGERREINMATDEALRVGGKILAITGFSPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTSAQMMLTDLLFMALVQQ 262


>gi|297530743|ref|YP_003672018.1| signal transduction protein with CBS domains [Geobacillus sp.
           C56-T3]
 gi|297253995|gb|ADI27441.1| putative signal transduction protein with CBS domains [Geobacillus
           sp. C56-T3]
          Length = 141

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +        L +    + +   G + +VD+  +L G+IT+ DI       K   + 
Sbjct: 8   MSTDVQYCTPLDNLYEVAVKMRDFNVGAIPIVDD-GRLVGMITDRDIVVRGMAEKRPGST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V +VM ++   +  D  +  A  ++ +H I  L VV +  + +GI+   DL
Sbjct: 67  AVTEVMSRDLVTLSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIISLGDL 117



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  + +       L      +R  N+  + +VDD  + +G++   D++
Sbjct: 2   QTVRDVMSTDVQYCTPLDNLYEVAVKMRDFNVGAIPIVDD-GRLVGMITDRDIV 54



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           +  +      G  P         + D   + ++  R+          PG    T  +   
Sbjct: 24  VAVKMRDFNVGAIP--------IVDDGRLVGMITDRDIVVRGMAEKRPGSTAVTEVMSRD 75

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            V         +     +  A  +++  +   + VV E  +L GII+ GD+
Sbjct: 76  LVT--------LSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIISLGDL 117


>gi|254393775|ref|ZP_05008892.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294814613|ref|ZP_06773256.1| CBS domain containing membrane protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442999|ref|ZP_08217733.1| hypothetical protein SclaA2_18128 [Streptomyces clavuligerus ATCC
           27064]
 gi|197707379|gb|EDY53191.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327212|gb|EFG08855.1| CBS domain containing membrane protein [Streptomyces clavuligerus
           ATCC 27064]
          Length = 210

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G    +   +L E     V VVDE ++  G+++E D+ R         + E +M   
Sbjct: 17  VQRGTAFKEIARLLDEYGITAVPVVDEDERPVGVVSEADLLRRQTSRTTAGTAEGLMTSP 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             V   +  +  A +++ +  I  L VVD   +  G+V 
Sbjct: 77  AIVAEPEWSVVRAARVMEEKRIKRLPVVDGEGRLTGVVS 115



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    V D+M      +   T      +LL ++ I+ + VVD+ ++ +G+V   DLLR
Sbjct: 1   MRHRRVADLMTPVAVSVQRGTAFKEIARLLDEYGITAVPVVDEDERPVGVVSEADLLR 58


>gi|330829939|ref|YP_004392891.1| Inosine-5'-monophosphate dehydrogenase [Aeromonas veronii B565]
 gi|328805075|gb|AEB50274.1| Inosine-5'-monophosphate dehydrogenase [Aeromonas veronii B565]
          Length = 487

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKYESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    +     +  +  F    VV +G +L GIIT  D+         + +VE +M 
Sbjct: 98  VTVRPDMTIAQIKELSHKNGFAGYPVVTDGNQLVGIITGRDVRFVID---LSQTVEQIMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      + E       + L+++H I  ++VV+   K  G++   D  + 
Sbjct: 155 QKDRLVTVREGAPREEVVALMQKHRIEKVLVVNGDFKLKGMITVKDFQKA 204


>gi|221209739|ref|ZP_03582720.1| CBS domain protein [Burkholderia multivorans CGD1]
 gi|221170427|gb|EEE02893.1| CBS domain protein [Burkholderia multivorans CGD1]
          Length = 149

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  VK    + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 11  SGRTIYTVKKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 70  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 123



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M +   +  V+      + + +++E R   + V+D+
Sbjct: 52  TERDYARKVVLQDRSSKATRVEEIMTTK--VRYVEPSQTSDECMALMTEHRMRHLPVLDD 109

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 110 -GKLIGLVSIGDLVKSVIAD 128


>gi|325578652|ref|ZP_08148728.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325159691|gb|EGC71822.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 487

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 69/171 (40%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     L  A+  + +K  F    VVD+   L GIIT  D    F KDL+  +V  +M
Sbjct: 98  VTVSPDLTLA-ALAEMVKKNGFAGYPVVDDENNLIGIITGRDTR--FVKDLSK-TVSQLM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K  +   + E       ++L+ ++ +  ++VVDD  K  G++   D  + 
Sbjct: 154 TKKEDLVTVKEGASRETILELMHKNRVEKVLVVDDAFKLKGMITVKDFQKA 204



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S +M   + +  VK G      + ++ + R   V VVD+  KLKG+IT  D  +   K
Sbjct: 148 TVSQLMTKKEDLVTVKEGASRETILELMHKNRVEKVLVVDDAFKLKGMITVKDFQKAEQK 207


>gi|225871481|ref|YP_002747428.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equi subsp.
           equi 4047]
 gi|225700885|emb|CAW95652.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equi subsp.
           equi 4047]
          Length = 495

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 47  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSIAEQAEEVRKVKRSENGVII 101

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 102 DPFFLTPEHKVAEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIS 158

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T L  A ++L +H I  L +VDD  +  G++   D+
Sbjct: 159 EHMTSEQLVTAEVGTDLETAERILHEHRIEKLPLVDDNGRLSGLITIKDI 208


>gi|146284211|ref|YP_001174364.1| nucleotidyltransferase, putative [Pseudomonas stutzeri A1501]
 gi|145572416|gb|ABP81522.1| nucleotidyltransferase, putative [Pseudomonas stutzeri A1501]
 gi|327482570|gb|AEA85880.1| nucleotidyltransferase, putative [Pseudomonas stutzeri DSM 4166]
          Length = 652

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/201 (17%), Positives = 70/201 (34%), Gaps = 14/201 (6%)

Query: 140 PLIAITSENKS---VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+ A+  E  +    +A        L K         +P         +   L +   ++
Sbjct: 110 PMAALMGERATRTAHLAAEDTFCFLLNKPAFVNLVSNSPVFRDFAMRGVSSLLDLVNQQA 169

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
                     +   G+  +L     ++        L     PL +A+ ++ E+  G + +
Sbjct: 170 ------QMRAVESLGENFSLETSIGELALHHPVSCL--PSRPLNEAVAMMQEENVGSIVI 221

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           VDE    +GI T  D+ R        L   +   M  +P  +  D     A   + + +I
Sbjct: 222 VDEALHPQGIFTLRDLRRAIGTGTTDLSQPIAQFMTHDPFYLPPDATAFDAAIAMTERHI 281

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
           + + VVD+     G++   DL
Sbjct: 282 AHVCVVDN-GLLRGVISERDL 301



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             S+ ++ + +P   L    L  A+ ++++ N+  +++VD+     GI    DL R 
Sbjct: 184 ETSIGELALHHPVSCLPSRPLNEAVAMMQEENVGSIVIVDEALHPQGIFTLRDLRRA 240


>gi|109896856|ref|YP_660111.1| signal-transduction protein [Pseudoalteromonas atlantica T6c]
 gi|109699137|gb|ABG39057.1| putative signal-transduction protein with CBS domains
           [Pseudoalteromonas atlantica T6c]
          Length = 611

 Score = 88.0 bits (217), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 54/105 (51%), Gaps = 4/105 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNP 293
              ++  + ++S+     + + D  Q L GI+T+ DI  R   +  +  L+V ++M ++P
Sbjct: 164 NSSILQGVQVMSKSGVSSLVITD-NQLLVGILTDRDIRNRVVAQQTDVNLAVSEIMTRDP 222

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLR 337
             I +   L  A+ ++ +HN+  L VVD      +G++   D++R
Sbjct: 223 VKISDQRTLFDALCVMTEHNVHHLPVVDKNSGVPLGMLTASDMIR 267



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRN 275
                  +     L DA+ +++E     + VVD+      G++T  D+ R+
Sbjct: 218 MTRDPVKISDQRTLFDALCVMTEHNVHHLPVVDKNSGVPLGMLTASDMIRH 268


>gi|303230782|ref|ZP_07317529.1| inosine-5'-monophosphate dehydrogenase [Veillonella atypica
           ACS-049-V-Sch6]
 gi|302514542|gb|EFL56537.1| inosine-5'-monophosphate dehydrogenase [Veillonella atypica
           ACS-049-V-Sch6]
          Length = 485

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGG-----MGVIHKNMSIEEQAHEVDTVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + +   V +  E  KL GIIT  D+   F  DL+   + + 
Sbjct: 98  DPIFLSPQNLLSDAEELMRKYKISGVPIT-EHGKLVGIITNRDMR--FETDLSR-QIGEC 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +      E T L +A  +L +H I  L +VD      G++   D+ + 
Sbjct: 154 MTSEGLVTAPEGTSLEMAKSILSKHRIEKLPLVDKDGNLKGLITIKDIEKA 204


>gi|229079434|ref|ZP_04211975.1| RpiR family transcriptional regulator [Bacillus cereus Rock4-2]
 gi|228703891|gb|EEL56336.1| RpiR family transcriptional regulator [Bacillus cereus Rock4-2]
          Length = 284

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KSV++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSVLSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|225630007|ref|YP_002726798.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
 gi|225591988|gb|ACN95007.1| inosine monophosphate dehydrogenase [Wolbachia sp. wRi]
          Length = 497

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 40  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +AI+++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 97  ITISPDKTVAEAISLMREHNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNVKVSEVMT 154

Query: 291 KN-PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E       AM+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 155 KDKLVTVREQGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204


>gi|145631107|ref|ZP_01786882.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
           R3021]
 gi|260582893|ref|ZP_05850678.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           NT127]
 gi|144983392|gb|EDJ90874.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
           R3021]
 gi|260094106|gb|EEW78009.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           NT127]
          Length = 488

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVLPNLTLAELAEMVKKNGFAGYPVVDRENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K  +   + E       ++L+ QH +  ++V++D  K  G++   D  + 
Sbjct: 156 KKEDLVTVKEGASREEILELMHQHRVEKVLVINDSFKLKGMITVKDFQKA 205



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   + +  VK G    + + ++ + R   V V+++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKEDLVTVKEGASREEILELMHQHRVEKVLVINDSFKLKGMITVKDFQKAEQK 208


>gi|46203008|ref|ZP_00052236.2| COG0516: IMP dehydrogenase/GMP reductase [Magnetospirillum
           magnetotacticum MS-1]
          Length = 347

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++          L P  +   + +          +   
Sbjct: 18  NLPIIASAMDTVTEAPMAIAMAQNGGLGVIH-RNLEPAEQAEQVRLVKKYESGMVLNPIT 76

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++   R   + VV+ G      KL GI+T  D+    +       V +
Sbjct: 77  IHPDETLADAFEVMKSNRISGIPVVERGPNGSRGKLVGILTNRDVRFATNTG---QPVAE 133

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 134 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 182


>gi|254490070|ref|ZP_05103263.1| inosine-5'-monophosphate dehydrogenase [Methylophaga thiooxidans
           DMS010]
 gi|224464734|gb|EEF80990.1| inosine-5'-monophosphate dehydrogenase [Methylophaga thiooxydans
           DMS010]
          Length = 487

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          +LH    +         V         
Sbjct: 40  NIPLLSAAMDTVTEGRLAIAMAQEGGLG-----ILHKNMTIEQQAEEVRKVKKFESGVVR 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + +        V VVD G+ L GI+T  D+    H D     V ++
Sbjct: 95  DPITVNPSTTIGEVVELTRSHNISGVPVVD-GEDLVGIVTSRDLRFETHYDN---PVSEI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K      + ED      + LL  + I  ++VVDD     G++   D+ +
Sbjct: 151 MTKKDKLVTVKEDASREEVLNLLHSNRIEKVLVVDDNFHLTGMITVKDIQK 201



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 29/68 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S++M   D +  VK      + + +L   R   V VVD+   L G+IT  DI +     
Sbjct: 147 VSEIMTKKDKLVTVKEDASREEVLNLLHSNRIEKVLVVDDNFHLTGMITVKDIQKQTDNP 206

Query: 280 LNTLSVED 287
             +   ++
Sbjct: 207 HASKDAQE 214


>gi|261419287|ref|YP_003252969.1| signal transduction protein with CBS domains [Geobacillus sp.
           Y412MC61]
 gi|319766103|ref|YP_004131604.1| signal transduction protein with CBS domains [Geobacillus sp.
           Y412MC52]
 gi|261375744|gb|ACX78487.1| putative signal transduction protein with CBS domains [Geobacillus
           sp. Y412MC61]
 gi|317110969|gb|ADU93461.1| putative signal transduction protein with CBS domains [Geobacillus
           sp. Y412MC52]
          Length = 141

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +        L +    + +   G + +VD+  +L G+IT+ DI       K   + 
Sbjct: 8   MSTDVQYCTPLDNLYEVAVKMRDFNVGAIPIVDD-GRLVGMITDRDIVVRGMAEKRPGST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V +VM ++   +  D  +  A  ++ +H I  L VV +  + +GI+   DL
Sbjct: 67  AVTEVMSRDLVTLSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIISIGDL 117



 Score = 43.7 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  + +       L      +R  N+  + +VDD  + +G++   D++
Sbjct: 2   QTVRDVMSTDVQYCTPLDNLYEVAVKMRDFNVGAIPIVDD-GRLVGMITDRDIV 54



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 36/111 (32%), Gaps = 17/111 (15%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           +  +      G  P         + D   + ++  R+          PG    T  +   
Sbjct: 24  VAVKMRDFNVGAIP--------IVDDGRLVGMITDRDIVVRGMAEKRPGSTAVTEVMSRD 75

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            V         +     +  A  +++  +   + VV E  +L GII+ GD+
Sbjct: 76  LVT--------LSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIISIGDL 117


>gi|149183232|ref|ZP_01861677.1| hypothetical protein BSG1_17271 [Bacillus sp. SG-1]
 gi|148849065|gb|EDL63270.1| hypothetical protein BSG1_17271 [Bacillus sp. SG-1]
          Length = 143

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTL 283
               +        +ID   ++ +   G + V  E  +LKGI+T+ DI  +    K     
Sbjct: 8   MTQQVETCSPSSSIIDVAKLMKDLDVGAIPVS-ENNELKGILTDRDIVIHGLAEKGSADF 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V+++M +N   +  DT +  A   + +  I  L V+D   + +GIV   DL
Sbjct: 67  QVKEIMTENVDYVKPDTDINEAYTTMAEKQIRRLPVLDQNNQVVGIVSLGDL 118



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G                +++  VK    + +A T ++EK+   + V+D+  ++ GI++ G
Sbjct: 57  GLAEKGSADFQVKEIMTENVDYVKPDTDINEAYTTMAEKQIRRLPVLDQNNQVVGIVSLG 116

Query: 271 DIFRNFHKDLNT-LSVEDV 288
           D+    ++D N+  ++ED+
Sbjct: 117 DLAVKLNQDRNSGDTLEDI 135



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++DVM +  +     + +    +L++  ++  + V  +  +  GI+   D++
Sbjct: 2   TNIQDVMTQQVETCSPSSSIIDVAKLMKDLDVGAIPV-SENNELKGILTDRDIV 54


>gi|332185073|ref|ZP_08386822.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. S17]
 gi|332014797|gb|EGI56853.1| inosine-5'-monophosphate dehydrogenase [Sphingomonas sp. S17]
          Length = 485

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI + +          VLH    +         V      + +
Sbjct: 39  NIPVLSAAMDTVTEADMAIVMAQLGG-----MGVLHRNLTVEQQVAAVRQVKRFESGMVV 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L +A  +++  R   + VV+   +L GI+T  D+      +     V ++
Sbjct: 94  NPITISPTATLSEAQALMARHRISGIPVVEFDGRLVGILTNRDVRFA---ENPQQPVSEL 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   +   +        A +LL    I  L+VVDD  + +G++   D+ + 
Sbjct: 151 MTHEDLATVKVGVGQDEARRLLHARRIEKLLVVDDSYRCVGLITVKDIEKA 201


>gi|94967662|ref|YP_589710.1| signal-transduction protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94549712|gb|ABF39636.1| putative signal-transduction protein with CBS domains [Candidatus
           Koribacter versatilis Ellin345]
          Length = 142

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
           +  +   + +V+    +I+A+  + E   G V V+D    L GI +E D+         D
Sbjct: 8   LKQNHHDLHVVQHDQSVIEAVHFMVENNVGAVPVLD-HGHLVGIFSERDVMTRVVVRGMD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ +VE VM   P  +  +T +   M L++QH    L V  + ++ +G +   DLL
Sbjct: 67  PHSTTVETVMTPEPLAVAPETSVHDCMVLMKQHKFRHLPVC-EGRRLVGFLSLRDLL 122


>gi|121608743|ref|YP_996550.1| RpiR family transcriptional regulator [Verminephrobacter eiseniae
           EF01-2]
 gi|121553383|gb|ABM57532.1| transcriptional regulator, RpiR family [Verminephrobacter eiseniae
           EF01-2]
          Length = 281

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 56/166 (33%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++L        +     AVE I A      R+   G+G SG +           G  
Sbjct: 99  NAVAALLHYRNAASTAAVERAVEAIAATWKTGKRIEFYGVGNSGIVAQDAQHKFFRLGIT 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S              ++   D  +++S SG + +L      AR+     I IT+   S +
Sbjct: 159 SIASSDGHIQVMSATLLGPGDCAVIISNSGRTRDLMDAAEIARKNGATTIVITASG-SPL 217

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A    I L          +  +P  S ++ L I D LA  +     
Sbjct: 218 ASSCQIHLAADHPEAYDRY--SPMVSRLLHLLIIDVLATCVALRIG 261


>gi|94266277|ref|ZP_01289982.1| IMP dehydrogenase [delta proteobacterium MLMS-1]
 gi|93453128|gb|EAT03599.1| IMP dehydrogenase [delta proteobacterium MLMS-1]
          Length = 486

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +         V  S   + +
Sbjct: 42  NMPLLSAAMDSVTEHRTAITMAREGG-----MGIIHKNMSIAEQAQEVRKVKKSESGMVI 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I+   +   V V+ +G KL GI+T  D+     ++L    V DV
Sbjct: 97  DPITVDEERTVREVTEIMRHNQISGVPVL-KGGKLVGIVTNRDLRFVTDENL---KVRDV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  KN         L  +  LL +H I  L+VVD+     G++   D+ +  
Sbjct: 153 MTGKNLVTAKPGITLEHSKALLHEHRIEKLLVVDEAGDLQGLITIKDIEKLK 204


>gi|262038888|ref|ZP_06012233.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii
           F0264]
 gi|261747091|gb|EEY34585.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia goodfellowii
           F0264]
          Length = 489

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+       F   +  +     ++  +    S ++    + 
Sbjct: 44  NIPVMSAAMDTVTESQLAIAIAREGGIGFIHKNMTIERQADEVEKVKRYESGMI---TNP 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    L +A  ++   +   + V+D+   LKGIIT  D+    +++  T+ VE+VM 
Sbjct: 101 ITLEEHSMLKEANDLMKTYKISGLPVIDKKGNLKGIITNRDLK---YRENLTVKVEEVMT 157

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A  +L +H I  L +V   +K  G++   D+
Sbjct: 158 KENLITAPVGTTLDEAKAILLEHRIEKLPIV-QRKKLKGLITIKDI 202


>gi|260427030|ref|ZP_05781009.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Citreicella sp. SE45]
 gi|260421522|gb|EEX14773.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Citreicella sp. SE45]
          Length = 607

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 60/146 (41%), Gaps = 10/146 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F          +    +            +  G  + +A ++++E+R   V ++ EG+ L
Sbjct: 126 FDRSRAAKPRKSDLAHSRVETLMAADPLTIGPGATVQEAASLMAERRVSSVCII-EGEAL 184

Query: 264 KGIITEGDI-FRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           KGI+T  D+  +   + L     V  VM + P  +    + +  + ++ + NI  + V  
Sbjct: 185 KGILTIRDVSAKVVARGLPFDTPVTQVMTEAPLTLAPSDIGSDVLHMMMERNIGHVPVT- 243

Query: 322 DCQKAIGIVHFLDLLR------FGII 341
           +  + +GIV   DL R       G++
Sbjct: 244 EGGRLVGIVTQTDLTRFQAVSSAGLV 269


>gi|254478846|ref|ZP_05092211.1| nucleotidyl transferase family protein [Carboxydibrachium pacificum
           DSM 12653]
 gi|214035208|gb|EEB75917.1| nucleotidyl transferase family protein [Carboxydibrachium pacificum
           DSM 12653]
          Length = 352

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 6/115 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL 283
                  L+K    + +A+  L+E     + V+D+  KL G IT+GDI R    ++    
Sbjct: 1   MERIKSVLIKKESLIKEALKQLNENTLQILLVIDDSSKLIGTITDGDIRRAILNNVSFDE 60

Query: 284 SVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M K+PK   I E+     A +L+ +H +  + V+D  ++ I ++   +LL
Sbjct: 61  PVSKIMNKSPKFVYIGEE---EKAKELMIKHKVKTIPVLDKEKRVIDLILMENLL 112



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 27/43 (62%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           I +++L+  A++ L ++ + +L+V+DD  K IG +   D+ R 
Sbjct: 9   IKKESLIKEALKQLNENTLQILLVIDDSSKLIGTITDGDIRRA 51


>gi|169633658|ref|YP_001707394.1| hypothetical protein ABSDF2087 [Acinetobacter baumannii SDF]
 gi|169152450|emb|CAP01415.1| conserved hypothetical protein [Acinetobacter baumannii]
          Length = 143

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AITI++EK  G + VV EG+++ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TAKVITVGLNNTVEECLQLMTDRHLRHLPVLDN-GKLVGFISIGDLVKA 125



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+        +       +        +  V +   + + + +++++    + V+D
Sbjct: 52  LSERDYT--RKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLD 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
              KL G I+ GD+ +   +D   L
Sbjct: 110 -NGKLVGFISIGDLVKAAMEDQKVL 133



 Score = 39.5 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A+ ++ +  I  L VV + ++ +GI+   D  R 
Sbjct: 18  TISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRK 60


>gi|169795727|ref|YP_001713520.1| hypothetical protein ABAYE1626 [Acinetobacter baumannii AYE]
 gi|184158370|ref|YP_001846709.1| CBS domain-containing protein [Acinetobacter baumannii ACICU]
 gi|213157580|ref|YP_002319625.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
 gi|215483212|ref|YP_002325419.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
 gi|260554789|ref|ZP_05827010.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606]
 gi|301347585|ref|ZP_07228326.1| CBS domain pair family protein [Acinetobacter baumannii AB056]
 gi|301513137|ref|ZP_07238374.1| CBS domain pair family protein [Acinetobacter baumannii AB058]
 gi|301596680|ref|ZP_07241688.1| CBS domain pair family protein [Acinetobacter baumannii AB059]
 gi|332850270|ref|ZP_08432618.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332871229|ref|ZP_08439798.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332873862|ref|ZP_08441802.1| CBS domain protein [Acinetobacter baumannii 6014059]
 gi|169148654|emb|CAM86520.1| conserved hypothetical protein [Acinetobacter baumannii AYE]
 gi|183209964|gb|ACC57362.1| CBS domain protein [Acinetobacter baumannii ACICU]
 gi|193077532|gb|ABO12362.2| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
 gi|213056740|gb|ACJ41642.1| CBS domain containing protein [Acinetobacter baumannii AB0057]
 gi|213985702|gb|ACJ56001.1| CBS domain pair family protein [Acinetobacter baumannii AB307-0294]
 gi|260411331|gb|EEX04628.1| CBS domain-containing protein [Acinetobacter baumannii ATCC 19606]
 gi|322508696|gb|ADX04150.1| CBS domain-containing protein [Acinetobacter baumannii 1656-2]
 gi|323518303|gb|ADX92684.1| CBS domain-containing protein [Acinetobacter baumannii TCDC-AB0715]
 gi|332730845|gb|EGJ62154.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332731638|gb|EGJ62922.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332737848|gb|EGJ68735.1| CBS domain protein [Acinetobacter baumannii 6014059]
          Length = 143

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AITI++EK  G + VV EG+++ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TAKVITVGLNNTVEECLQLMTDRHLRHLPVLDN-GKLVGFISIGDLVKA 125



 Score = 39.9 bits (92), Expect = 0.64,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+        +       +        +  V +   + + + +++++    + V+D
Sbjct: 52  LSERDYT--RKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLD 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
              KL G I+ GD+ +   +D   L
Sbjct: 110 -NGKLVGFISIGDLVKAAMEDQKVL 133



 Score = 39.5 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A+ ++ +  I  L VV + ++ +GI+   D  R 
Sbjct: 18  TISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRK 60


>gi|325108885|ref|YP_004269953.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis
           DSM 5305]
 gi|324969153|gb|ADY59931.1| inosine-5'-monophosphate dehydrogenase [Planctomyces brasiliensis
           DSM 5305]
          Length = 497

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 74/180 (41%), Gaps = 14/180 (7%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +            P  S+ M       +AIA+ +          ++H    +    +  
Sbjct: 30  DISSRLTRNIRLNVPIISSPMDTVTESDMAIAMAQEGGIG-----IIHKNMSIEQQALHV 84

Query: 221 SDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + V  S   + +    +     + +A  ++ E+  G + +  E  KLKGI+T  D+ R  
Sbjct: 85  NRVKRSEHGVIVDPVTLPPSATVGEARQMMDERNVGGIPIT-EDGKLKGILTRRDL-RFL 142

Query: 277 HKDLNTLSVEDVMIKNPKVILEDT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D  +  + +VM K   V   +T  L  A ++LR++ +  L++V+D  +  G++   D+
Sbjct: 143 ETD--STQIAEVMTKEGLVTAPETTDLKEAERILRENKVEKLLLVNDRYELRGLITIKDI 200


>gi|225677137|ref|ZP_03788136.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
 gi|225590804|gb|EEH12032.1| inosine monophosphate dehydrogenase [Wolbachia endosymbiont of
           Muscidifurax uniraptor]
          Length = 497

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 40  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +AI+++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 97  ITISPDKTVAEAISLMREHNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNVKVSEVMT 154

Query: 291 KN-PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E       AM+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 155 KDKLVTVREQGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204


>gi|315652431|ref|ZP_07905419.1| inosine-5'-monophosphate dehydrogenase [Eubacterium saburreum DSM
           3986]
 gi|315485330|gb|EFU75724.1| inosine-5'-monophosphate dehydrogenase [Eubacterium saburreum DSM
           3986]
          Length = 484

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 67/181 (37%), Gaps = 14/181 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + +            P  SA M       +AIA+            ++H    +      
Sbjct: 28  IDISTYLTKNIKLNIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIKEQAEE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +            L DA  +++  R   V +  EG+KL GIIT  D+   
Sbjct: 83  VDKVKRSENGVITDPFYLSPKHTLFDANELMARYRISGVPIT-EGKKLVGIITNRDLK-- 139

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           F +D  T  + + M K +    LE T L  A ++L +  +  L +VD      G++   D
Sbjct: 140 FEED-YTKKISECMTKDHLVTALEGTTLDEAKKILAKARVEKLPIVDKEGNLKGLITIKD 198

Query: 335 L 335
           +
Sbjct: 199 I 199


>gi|309776671|ref|ZP_07671645.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
 gi|308915419|gb|EFP61185.1| CBS domain protein [Erysipelotrichaceae bacterium 3_1_53]
          Length = 215

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                   + +   + D + I+SEK    + VV  G+KL G++TEG I +          
Sbjct: 6   RMTKHPICIDVNSKISDVVDIMSEKELHRIPVV-SGKKLVGLVTEGMISKKGASKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+  SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+  
Sbjct: 65  IYELNYLLSKTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTS 124

Query: 333 LDLLRF 338
            D+L  
Sbjct: 125 NDVLSA 130



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             S        +  +     L DA  ++ +   GC+ VV++  ++ GI+T  D+   F
Sbjct: 74  KTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTSNDVLSAF 131


>gi|227828274|ref|YP_002830054.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227831032|ref|YP_002832812.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.S.2.15]
 gi|229579913|ref|YP_002838312.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581426|ref|YP_002839825.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|229585503|ref|YP_002844005.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620466|ref|YP_002915292.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284998527|ref|YP_003420295.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.D.8.5]
 gi|227457480|gb|ACP36167.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.S.2.15]
 gi|227460070|gb|ACP38756.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228010628|gb|ACP46390.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012142|gb|ACP47903.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228020553|gb|ACP55960.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381536|gb|ACR42624.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284446423|gb|ADB87925.1| Protein of unknown function DUF293 [Sulfolobus islandicus L.D.8.5]
 gi|323475344|gb|ADX85950.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478069|gb|ADX83307.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 300

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L +A  I  ++      V+++ +K+ GI+T  DI + F +   T  V + M  N 
Sbjct: 186 KPETSLREASMIFYKEAIRGAPVINQDEKVVGILTTADIIKAFFEGNYTAKVSEYMKTNV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I E+  L  A++ +  +N+  L+V+D   KA+GIV   D+LR   G+
Sbjct: 246 ISINENEDLLDAIRKMIIYNVGRLLVLDSNNKAVGIVTRTDILRSIAGL 294


>gi|254172211|ref|ZP_04878887.1| dehydrogenase [Thermococcus sp. AM4]
 gi|214034107|gb|EEB74933.1| dehydrogenase [Thermococcus sp. AM4]
          Length = 390

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V       P++K    L  A  ++ E     + V +   ++ G+I +  +  R  
Sbjct: 64  PTKAKVRDVYKPAPVIKPDEDLSKAAKLMMEVDLRSLPVGESKAEIIGVINDIALLERVA 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D     VE+ M K    +  +  +  A+  +R H IS + +VD+  K  G+V   DL+
Sbjct: 124 EGDFGKRKVEEFMTKEVITLGPNDTVAKALATMRDHAISRIPIVDEEGKLEGLVTLHDLI 183



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 60/150 (40%), Gaps = 17/150 (11%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           ND  +L    +         + M     +  +     +  A+  + +     + +VDE  
Sbjct: 114 NDIALLERVAEGDFGKRKVEEFM--TKEVITLGPNDTVAKALATMRDHAISRIPIVDEEG 171

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVE---------------DVMIKNPKVILEDTLLTVAM 306
           KL+G++T  D+   F K                       DVMI+    IL D  +  A+
Sbjct: 172 KLEGLVTLHDLIVRFIKPRFRAKAGELAGEKIPPFSMPLRDVMIRGVITILPDAKVREAV 231

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +R ++I  L+VV++  K +GI+   DLL
Sbjct: 232 ATMRDNDIDGLVVVNENNKVVGILTVKDLL 261



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-EGDIFRNFHK 278
                   D    + I  PL +AI I  ++    + V D G   KG++T +  I  +   
Sbjct: 4   IQVQEVMTDRFQKIDIDAPLSEAIGIFEKEDPDLILVFD-GNLYKGVLTQDLIIRSHLKW 62

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           D     V DV    P VI  D  L+ A +L+ + ++  L V +   + IG+++
Sbjct: 63  DPTKAKVRDVYKPAP-VIKPDEDLSKAAKLMMEVDLRSLPVGESKAEIIGVIN 114


>gi|171778595|ref|ZP_02919722.1| hypothetical protein STRINF_00574 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171282818|gb|EDT48242.1| hypothetical protein STRINF_00574 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 522

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 74  NIPIVTAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIQEQAEEIRKVKRSENGVII 128

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D +     
Sbjct: 129 DPFFLTPKHSVSEAEELMQRYRISGVPIVETLENRKLVGIITNRDMR--FISDYHAPISA 186

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 187 HMTSEKLVTAPVGTDLETAERILHEHRIEKLPLVDEAGRLSGLITIKDI 235


>gi|170718018|ref|YP_001783527.1| hypothetical protein HSM_0174 [Haemophilus somnus 2336]
 gi|168826147|gb|ACA31518.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Haemophilus somnus 2336]
          Length = 626

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 8/130 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K          +  +   I LV     L  A   + E+R     V+ +  KL GII + D
Sbjct: 149 KNQNDIFMKKVIDIANPKIALVDTNTTLQQAAIRMCEQRRSSALVM-QQNKLIGIIHDRD 207

Query: 272 IFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAI 327
           + +       D+NTL V ++M  NP VI  D L+  A+ ++ QHNI  L V VDD  K  
Sbjct: 208 MTKKVVAQGLDVNTL-VTEIMNINPPVIRGDELVLQAISMMMQHNIRSLPVIVDD--KVQ 264

Query: 328 GIVHFLDLLR 337
           GI+   DL++
Sbjct: 265 GILTATDLVK 274


>gi|294675913|ref|YP_003576528.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
           domain-/unknown function domain-containing protein
           [Rhodobacter capsulatus SB 1003]
 gi|294474733|gb|ADE84121.1| cyclic nucleotide-binding domain protein/cystathionine
           beta-synthase domain protein/protein of unknown function
           DUF294 domain protein [Rhodobacter capsulatus SB 1003]
          Length = 608

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 53/139 (38%), Gaps = 3/139 (2%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F+    G K+ T                       ++ A  ++ +     + VVD G+
Sbjct: 123 ERFFNRKRGEKVSTDIATQKVADLVARKPLACTPETTVLTAARMMRDAHVSSLGVVDPGE 182

Query: 262 KLKGIITEGDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L GI+T+ D+      D      +V  VM   P  +    L +  + ++ +  I  L +
Sbjct: 183 RLLGIVTQRDLSNKVLADGLPTGTAVAAVMTAGPVSLPPTALGSDILHIMLERRIGHLPI 242

Query: 320 VDDCQKAIGIVHFLDLLRF 338
             +  + +G++   DL RF
Sbjct: 243 T-EDGRFVGMITQTDLTRF 260


>gi|256828518|ref|YP_003157246.1| CBS domain-containing membrane protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256577694|gb|ACU88830.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 221

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 51/118 (43%), Gaps = 12/118 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  V     ++ A  ++ EK    + VVD+  K+ G++++ D+             
Sbjct: 7   MTKDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDVKEASPSKATTLDV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +  L+ + V+++M  +P  I E   +     ++    IS L V++D  + +GI+ 
Sbjct: 67  HELYYLLSEIKVKNIMTPSPLTIRETDTVVKCAAIMHDKKISGLPVLNDKDELVGIMT 124



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M K+   +  +T +  A +L+++  I  L VVDD  K +G++   D+   
Sbjct: 3   IKDWMTKDVITVDPETSMMRAAKLMKEKGIRRLPVVDDKGKVLGMLSDRDVKEA 56


>gi|66803685|ref|XP_635678.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
 gi|60463995|gb|EAL62158.1| hypothetical protein DDB_G0290595 [Dictyostelium discoideum AX4]
          Length = 228

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 60/123 (48%), Gaps = 8/123 (6%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             + ++   +  V     + +AI ++++K+ G   VVD   ++ GI +E D       DL
Sbjct: 90  EKIRNNLGRMVKVGENETVYNAIKVMNDKKVGATIVVDRNNRMCGIFSERDYLSKV--DL 147

Query: 281 NTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             LS     V+DV  K    +  D+  T  + ++ + NI  L V+ + ++ +G++   D+
Sbjct: 148 RGLSPKETLVKDVCTKQIITVSSDSGATKCLSIMSKRNIRHLPVI-ENKRLLGMLSIGDI 206

Query: 336 LRF 338
           +++
Sbjct: 207 VKY 209


>gi|58698104|ref|ZP_00373027.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila ananassae]
 gi|58535350|gb|EAL59426.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila ananassae]
          Length = 497

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 73/170 (42%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 40  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +AI+++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 97  ITISPDKTVAEAISLMREHNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNVKVSEVMT 154

Query: 291 KN-PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E       AM+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 155 KDKLVTVREQGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 204


>gi|256390217|ref|YP_003111781.1| inosine-5'-monophosphate dehydrogenase [Catenulispora acidiphila
           DSM 44928]
 gi|256356443|gb|ACU69940.1| inosine-5'-monophosphate dehydrogenase [Catenulispora acidiphila
           DSM 44928]
          Length = 498

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 47/202 (23%), Positives = 63/202 (31%), Gaps = 26/202 (12%)

Query: 151 VVACHADIVLTLP----KEPESCPHG---------LAPTTSAIMQLAIGDALAIALLESR 197
            +    D VL +P      P     G           P  SA M       +AIA+    
Sbjct: 12  TLGLTYDDVLLVPAYSEVVPTELSTGTRLSRNITLNVPLISAAMDTVTEARMAIAMARQG 71

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGC 253
                   VLH    +         V  S          V     L     + ++ R   
Sbjct: 72  GVG-----VLHRNLSIEAQAAQVDLVKRSESGMVTQPVTVAPDATLAQVDALCAKYRISG 126

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQH 312
           + V+     L GIIT  D+     K   +  V DVM   P V          AM+LL QH
Sbjct: 127 LPVIAPDGTLLGIITNRDLRFEVDK---SRRVADVMTPMPLVTGPAGISGEDAMKLLAQH 183

Query: 313 NISVLMVVDDCQKAIGIVHFLD 334
            I  L +V    K  G++   D
Sbjct: 184 KIEKLPLVTGDGKLSGLITVKD 205



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 36/105 (34%), Gaps = 21/105 (20%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MI 290
             + +A   ++  R G V V               + RN   +     V+ V      M+
Sbjct: 56  DTVTEARMAIAMARQGGVGV---------------LHRNLSIEAQAAQVDLVKRSESGMV 100

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             P  +  D  L     L  ++ IS L V+      +GI+   DL
Sbjct: 101 TQPVTVAPDATLAQVDALCAKYRISGLPVIAPDGTLLGIITNRDL 145


>gi|91975824|ref|YP_568483.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisB5]
 gi|91682280|gb|ABE38582.1| CBS:transport associated [Rhodopseudomonas palustris BisB5]
          Length = 243

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 53/142 (37%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                  + +  +     +IDA  ++ E     + VVD   KL GII+EGD  R      
Sbjct: 2   RAQQIMTEQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIRRAELGT 61

Query: 281 NTL------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                       V +VM  +P  I EDT +   ++ + +H++  
Sbjct: 62  QRKRSRWLRLLLGPGTCAADFVHEHGRKVGEVMTHHPHTITEDTPIEAIVKTMEKHHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+      +GIV   +LLR 
Sbjct: 122 LPVM-RGDLLVGIVTRKNLLRA 142



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  + +M +    I  +  +  A  ++ ++++S L VVD   K +GI+   D +R
Sbjct: 1   MRAQQIMTEQVMTIGPEASIIDAANVMLENHVSGLPVVDADGKLVGIISEGDFIR 55


>gi|237653285|ref|YP_002889599.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237624532|gb|ACR01222.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 480

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 4/130 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G               +        L+D +  + E    CV VVD G     I+T+ D
Sbjct: 1   MAGENEFFRPIREIEQRRVVSCSADDALVDIVGRMREMSISCVVVVD-GAHPTAILTDRD 59

Query: 272 IFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +        +D   L V DVM      I ED +L  A+  + +H I  L+VVD      G
Sbjct: 60  LRNKVIAAGRDPAGLRVRDVMSAPVITIGEDDVLYEALYRMSRHGIHRLVVVDRKGALAG 119

Query: 329 IVHFLDLLRF 338
           IV   DLLR 
Sbjct: 120 IVTVTDLLRL 129



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 33/94 (35%), Gaps = 11/94 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     L +A+  +S      + VVD    L GI+T  D+ R          V
Sbjct: 80  MSAPVITIGEDDVLYEALYRMSRHGIHRLVVVDRKGALAGIVTVTDLLR-LQAHSPHQLV 138

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            D+         E      A++ L Q  I  L+V
Sbjct: 139 LDI---------EKAESIDALRELHQR-IQQLIV 162


>gi|108743437|dbj|BAE95540.1| putative oxidoreductase [Streptomyces kanamyceticus]
          Length = 146

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS 284
               + +V+    L++A  ++  +  G V V   G ++ G++T+ DI  R      + L+
Sbjct: 9   MTTGVVVVRPDASLVEAAQLMRAQDIGDVLVAV-GGRILGVLTDRDITLRAVADGADPLT 67

Query: 285 VED--VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V    +   NP V+  D  ++ A+ L+R H +  L VV +  + +G+V   DL
Sbjct: 68  VSAQAICTPNPVVVTPDDAVSAAVDLMRDHAVRRLPVV-EDGRPVGMVSLGDL 119



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           V DVM     V+  D  L  A QL+R  +I  ++V     + +G++   D+ LR 
Sbjct: 5   VRDVMTTGVVVVRPDASLVEAAQLMRAQDIGDVLVA-VGGRILGVLTDRDITLRA 58


>gi|89099565|ref|ZP_01172440.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
 gi|89085718|gb|EAR64844.1| hypothetical protein B14911_11287 [Bacillus sp. NRRL B-14911]
          Length = 143

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           + +    + E+  G + +VD   +L G+IT+ DI       K   +  VED+M  +   +
Sbjct: 21  MYEVALKMKEQDVGAIPIVDAD-RLVGMITDRDIVVRGVAEKHPGSTKVEDIMSSDLVTV 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D  ++ A +++ +H I  L VV +  K  GI+   DL
Sbjct: 80  SPDANISEASRIMAEHQIRRLPVV-ENGKLAGIISLGDL 117



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 24/62 (38%), Gaps = 1/62 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G                  +  V     + +A  I++E +   + VV E  KL GII+ G
Sbjct: 57  GVAEKHPGSTKVEDIMSSDLVTVSPDANISEASRIMAEHQIRRLPVV-ENGKLAGIISLG 115

Query: 271 DI 272
           D+
Sbjct: 116 DL 117



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + D+M ++         +      +++ ++  + +VD   + +G++   D++  G+
Sbjct: 2   KKIGDIMTRDVDCCTLLDNMYEVALKMKEQDVGAIPIVDAD-RLVGMITDRDIVVRGV 58


>gi|107025989|ref|YP_623500.1| signal-transduction protein [Burkholderia cenocepacia AU 1054]
 gi|116692826|ref|YP_838359.1| signal-transduction protein [Burkholderia cenocepacia HI2424]
 gi|254250303|ref|ZP_04943623.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
 gi|105895363|gb|ABF78527.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia AU 1054]
 gi|116650826|gb|ABK11466.1| putative signal-transduction protein with CBS domains [Burkholderia
           cenocepacia HI2424]
 gi|124876804|gb|EAY66794.1| hypothetical protein BCPG_05192 [Burkholderia cenocepacia PC184]
          Length = 153

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKSDLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKIVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKIVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLVGLISIGDLVKSVIAD 132


>gi|326524536|dbj|BAK00651.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 559

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  L +A   ++ +R   V + D    L GI+T+ DI  R   + L      +  +M
Sbjct: 84  IPEGTTLSEACRRMAARRVDAVLLTDVNGLLSGIVTDKDIATRVIAEGLRVEQTIISKIM 143

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +  DTL   A+Q + Q     L VVD+ +    ++  LD+ +
Sbjct: 144 TRSPHYVTADTLAIEALQKMVQGKFRHLPVVDNGE----VIAMLDIAK 187



 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +V    P+  A   + E R   V +   G  L+GI T  D + R   ++
Sbjct: 241 STIITESTKVAIVSPSDPVYVAAQKMRELRVNSVVIT-TGNLLQGIFTSKDVLMRVVAQN 299

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+     VE VM  +P     DT +  A+ ++       + VVD   + +  +  L L +
Sbjct: 300 LSPELTLVEKVMTAHPDCATLDTSILDALHIMHDGKFLHIPVVDGDGRVVACLDVLQLTQ 359

Query: 338 FGI 340
             I
Sbjct: 360 AAI 362


>gi|312113876|ref|YP_004011472.1| inosine-5'-monophosphate dehydrogenase [Rhodomicrobium vannielii
           ATCC 17100]
 gi|311219005|gb|ADP70373.1| inosine-5'-monophosphate dehydrogenase [Rhodomicrobium vannielii
           ATCC 17100]
          Length = 498

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 13/175 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 42  TIPIISSAMDTVTEGPLAIAMAQAGGIGVIH-RNLKPEEQAQHIRQVKKFESGMVVNPVT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD--------EGQKLKGIITEGDIFRNFHKDLNTLS 284
           ++    L DA+ ++       + VV+           KL GI+T  D+    +    +  
Sbjct: 101 IEPTATLKDALELMKAHGISGIPVVEGVANGNGAPEGKLVGILTNRDVRFASNP---SQP 157

Query: 285 VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++M K +   + +      A  LL ++ I  L+VVDD  + IG++   D+ + 
Sbjct: 158 IHELMTKEDLITVRDGIPRDEAKLLLHKYRIEKLIVVDDKYRCIGLITVKDIEKA 212


>gi|161520491|ref|YP_001583918.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
 gi|189353318|ref|YP_001948945.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|160344541|gb|ABX17626.1| putative signal-transduction protein with CBS domains [Burkholderia
           multivorans ATCC 17616]
 gi|189337340|dbj|BAG46409.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
          Length = 153

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  VK    + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVKKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 127



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M +   +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIMTTK--VRYVEPSQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 114 -GKLIGLVSIGDLVKSVIAD 132


>gi|229190348|ref|ZP_04317349.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|228593132|gb|EEK50950.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10876]
          Length = 284

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKARGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLTQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|146418122|ref|XP_001485027.1| hypothetical protein PGUG_02756 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 551

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
                        + +   ++  KR  CV +VD+ +KL G+ T  D+  R     L+   
Sbjct: 62  KPSEPVTCTKNTTIYEVAQLMLAKRCNCVLIVDDHEKLLGLFTSKDLAFRVVGSGLDATV 121

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHF 332
            +V  VM  NP      +  + A+  + +H    + VV+D   + IG++  
Sbjct: 122 ATVGQVMTSNPLTSSATSPASQALDQMLEHKFRHMPVVEDSNTEIIGVLDI 172



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 3/124 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF 276
                V+ +        +   + +   ++       + + D   K+ GI++  D+ FR  
Sbjct: 227 PTIQSVVGNVSRPVFASLKATVYEVANMMKANNTSVILIRDGSGKVVGIVSSKDVTFRAI 286

Query: 277 HKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              LN    SV  VM  NP V+   T +  A++ +   N   L V D     I +V  L 
Sbjct: 287 AAGLNPKICSVVRVMTANPDVVNTSTTIRQALKQMLDGNYLNLPVEDSSHSIIAVVDVLS 346

Query: 335 LLRF 338
           L+  
Sbjct: 347 LIHA 350



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 5/63 (7%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R     + +L   +     P    ++T +    QL+     + +++VDD +K +G+   
Sbjct: 51  RRGLPGSVLSLKPSE-----PVTCTKNTTIYEVAQLMLAKRCNCVLIVDDHEKLLGLFTS 105

Query: 333 LDL 335
            DL
Sbjct: 106 KDL 108


>gi|114566449|ref|YP_753603.1| IMP dehydrogenase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
 gi|114337384|gb|ABI68232.1| inosine-5'-monophosphate dehydrogenase [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 484

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           + P  SA M       +AIA+            ++H    +         V  S   I  
Sbjct: 42  VIPILSAGMDTVTETRMAIAVAREGGIG-----IIHKNMSIEEQARMVDRVKRSEHGIIT 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA+ I+       V +  EG KL GIIT  DI   F  D N   +++V
Sbjct: 97  DPFFLSPDNIIRDALDIMEHYHISGVPIT-EGSKLVGIITNRDIR--FETDFNQ-PIKNV 152

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M     V     T +  AM LLR++ I  L +VDD    +G++   D+
Sbjct: 153 MTSEGLVTAPVGTSMDQAMDLLRKYKIEKLPLVDDSFNLMGLITIKDI 200


>gi|147863576|emb|CAN79772.1| hypothetical protein VITISV_019408 [Vitis vinifera]
          Length = 569

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM
Sbjct: 63  VPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVM 122

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 123 TRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 47/116 (40%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +  C  VV    + KGI+T  D + R   ++
Sbjct: 220 STIIPENSKVVTVSPTDTVLTAAKKMLELKLSCA-VVAVENRPKGILTSKDILMRVIAQN 278

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---IVHF 332
           L+  S   VM  NP+    DT +  A+  +       L V+D     +    ++H 
Sbjct: 279 LHPESTPVVMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHI 334


>gi|121996987|ref|YP_001001774.1| CBS domain-containing protein [Halorhodospira halophila SL1]
 gi|121588392|gb|ABM60972.1| CBS domain containing protein [Halorhodospira halophila SL1]
          Length = 145

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 56/116 (48%), Gaps = 11/116 (9%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----------NFHKDLNT 282
                + +A   +       + VVDE   L G++T+ D+ R           + +   + 
Sbjct: 15  HPDEGVREAFFKMRYNHIRHLPVVDEDMALLGMVTDRDLRRPDWVDEAPDIAHVYYLDDN 74

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++++VM ++P V+     +  A QL+R++    L V++  Q+ +G+V  +D+L+ 
Sbjct: 75  MALKNVMTRHPVVVHTYDPVQRAAQLMRENRFGALPVLNKEQRLVGMVSAVDMLQI 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++M         D  +  A   +R ++I  L VVD+    +G+V   DL R
Sbjct: 5   EIMTDKLVTGHPDEGVREAFFKMRYNHIRHLPVVDEDMALLGMVTDRDLRR 55



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 29/58 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                 +V    P+  A  ++ E RFG + V+++ Q+L G+++  D+ +   + L+  
Sbjct: 81  MTRHPVVVHTYDPVQRAAQLMRENRFGALPVLNKEQRLVGMVSAVDMLQILEELLDKF 138


>gi|294633519|ref|ZP_06712078.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831300|gb|EFF89650.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 217

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 48/131 (36%), Gaps = 19/131 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
              ++  V+      D +  L++     V VVD+  +  G+++E D+ R      +    
Sbjct: 10  MTHAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLRTVAGRPDPAGL 69

Query: 282 ---------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                            +  ++M   P        +  A + +  H +  L VVD+    
Sbjct: 70  LAEPRRDGVLGQASEEATAGELMTAPPVCARPGWSVVEAARTMDAHTVKRLPVVDETGVL 129

Query: 327 IGIVHFLDLLR 337
           +GIV   DLLR
Sbjct: 130 VGIVSRADLLR 140



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +VED+M      +  DT     ++ L  + +S + VVDD  + +G+V   DLLR
Sbjct: 1   MHHRTVEDLMTHAVVRVRRDTSFKDLVRTLADNGVSAVPVVDDLGRPVGLVSEADLLR 58



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G LG     A+            + G  +++A   +       + VVDE   L GI++  
Sbjct: 77  GVLGQASEEATAGELMTAPPVCARPGWSVVEAARTMDAHTVKRLPVVDETGVLVGIVSRA 136

Query: 271 DIFRNFHK 278
           D+ R F +
Sbjct: 137 DLLRVFLR 144


>gi|85716122|ref|ZP_01047098.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
 gi|85697121|gb|EAQ35003.1| hypothetical protein NB311A_11100 [Nitrobacter sp. Nb-311A]
          Length = 242

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN---- 275
                    +  V     ++DA   +  +    + VV+   K+ GII+EGD I R     
Sbjct: 2   RAHQIMTRRVITVHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIRRAEIGT 61

Query: 276 -------------FHKDLNTL------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                          +D +         V ++M  +P  + ED  L   + ++ Q  +  
Sbjct: 62  QRRRARWLAFLLGAGRDASDFVHEQGRKVGEIMTPDPYTVSEDASLEDIVTMMEQKRVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+ + Q  +GIV   +LL+ 
Sbjct: 122 LPVMRNDQ-IVGIVTRSNLLQA 142



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  DT +  A   + + +IS L VV+   K +GI+   D +R
Sbjct: 1   MRAHQIMTRRVITVHPDTTVVDAANTMLRQHISGLPVVNAEGKMVGIISEGDFIR 55



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 42/102 (41%), Gaps = 16/102 (15%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           LA  L   R+   +DF V   G K+G +                V     L D +T++ +
Sbjct: 69  LAFLLGAGRD--ASDF-VHEQGRKVGEIM---------TPDPYTVSEDASLEDIVTMMEQ 116

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVED 287
           KR   + V+    ++ GI+T  ++ +      +++   + +D
Sbjct: 117 KRVKRLPVM-RNDQIVGIVTRSNLLQAVAGLAREVPDPTADD 157


>gi|116511979|ref|YP_809195.1| transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
 gi|116107633|gb|ABJ72773.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           cremoris SK11]
          Length = 283

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 3/152 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +   AV  I   +  + + GIG S  +   +    +  G   FF+  A      L + 
Sbjct: 117 DDEIMAAVALIDEAES-IFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSIS 175

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            R  + I +S  G + E+  +    +   IP+IAITS  +S +   +D +L      E  
Sbjct: 176 DRKTIFIGISMKGETKEVIELARVVKGMKIPIIAITSREESTLGQMSDYILH-SVSGEDY 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
               A T S + QL + D L   +  S +F+E
Sbjct: 235 QMRTAATMSLMAQLYVVDILFY-MFVSEHFTE 265


>gi|288960069|ref|YP_003450409.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
 gi|288912377|dbj|BAI73865.1| hypothetical protein AZL_a03340 [Azospirillum sp. B510]
          Length = 151

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 55/129 (42%), Gaps = 9/129 (6%)

Query: 218 VCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDI 272
           +    ++ + ++  + V+    + DAI ++  +    + V D    EG  L G+++E DI
Sbjct: 1   MKVEHILRTKEARVVAVRTSATVADAIRLMKAENISALIVKDVCRTEGNTLAGVLSERDI 60

Query: 273 FRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     L  + V  +M + P        +  A+ L+ +H+I  L V+ +    +G+
Sbjct: 61  VHALLERGAPLLAMPVSQLMTRQPVTCAPSDSVREALHLMDKHHIRHLPVL-EDGHLVGV 119

Query: 330 VHFLDLLRF 338
           V   D  R 
Sbjct: 120 VSARDFTRL 128


>gi|251788757|ref|YP_003003478.1| inosine 5'-monophosphate dehydrogenase [Dickeya zeae Ech1591]
 gi|247537378|gb|ACT05999.1| inosine-5'-monophosphate dehydrogenase [Dickeya zeae Ech1591]
          Length = 487

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 61/172 (35%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           +H    +       S V      + +
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGIG-----FIHKNMPIERQAEEVSRVKRHESGVVV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +   +     F    VV  G++L GIIT  D+   F  DL+   V  V
Sbjct: 96  DPQTVTPETTLREVKALTERNGFAGYPVVTTGKELVGIITGRDVR--FVTDLDR-PVSAV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E     V +Q + +  I   +VVD+  + +G++   D  + 
Sbjct: 153 MTPKERLVTVKEGEARDVVLQKMHERRIEKALVVDEQFRLVGMITVKDFQKA 204


>gi|187919677|ref|YP_001888708.1| putative signal-transduction protein with CBS domains [Burkholderia
           phytofirmans PsJN]
 gi|187718115|gb|ACD19338.1| putative signal-transduction protein with CBS domains [Burkholderia
           phytofirmans PsJN]
          Length = 147

 Score = 87.6 bits (216), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           V     + +AI +++EK  G + V D G  + GI+TE D  R      +      V D+M
Sbjct: 20  VGADDSVYEAIKLMAEKGIGALVVTD-GDSIAGIVTERDYARKVVLMDRSSKATPVRDIM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K  + +  D      M L+ +  +  L V+++  + +G+V   DL++
Sbjct: 79  SKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND-RLVGMVSIGDLVK 125



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        +               ++  V+      D + +++E+R   + V+ E
Sbjct: 54  TERDYA--RKVVLMDRSSKATPVRDIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVI-E 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ +N 
Sbjct: 111 NDRLVGMVSIGDLVKNI 127



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +  D  +  A++L+ +  I  L+V D      GIV   D  R  ++
Sbjct: 19  TVGADDSVYEAIKLMAEKGIGALVVTDGD-SIAGIVTERDYARKVVL 64


>gi|26986946|ref|NP_742371.1| CBS domain-containing protein [Pseudomonas putida KT2440]
 gi|24981558|gb|AAN65835.1|AE016212_1 CBS domain protein [Pseudomonas putida KT2440]
          Length = 145

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 ++ +      V        ++DA+ +L+EK  G + VV EG ++ GI++E D  
Sbjct: 1   MKTVEQILKTKSQHQTVYTIGPDDSVLDALKLLAEKNIGALPVV-EGGQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VVD+  + +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVEPKQKLDFCMNLMTDRHLRHLPVVDN-GRLLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|330720398|gb|EGG98723.1| putative signal-transduction protein [gamma proteobacterium
           IMCC2047]
          Length = 623

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 7/115 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFRNFHKDL--NTL 283
              V     +  A   ++E+    + +     D+  ++ GIIT+ DI R        + +
Sbjct: 160 PVTVSSSTTVRQAAIRMTEENVSSLLITQSESDQPAQVIGIITDTDIRRRLVATGLSSDI 219

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V D+M      +     +  AM L+ +HN+  L V+   Q  IG++   D+LR+
Sbjct: 220 TVADIMTTELIYVQSHQFVFDAMMLMLKHNVKHLPVL-KKQLPIGLISHHDILRY 273



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIG 328
            R     L T  +  ++   P  +   T +  A   + + N+S L++     D   + IG
Sbjct: 140 KREDDDTLLTAKISALITTLPVTVSSSTTVRQAAIRMTEENVSSLLITQSESDQPAQVIG 199

Query: 329 IVHFLDLLR 337
           I+   D+ R
Sbjct: 200 IITDTDIRR 208


>gi|300022352|ref|YP_003754963.1| inosine-5'-monophosphate dehydrogenase [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299524173|gb|ADJ22642.1| inosine-5'-monophosphate dehydrogenase [Hyphomicrobium
           denitrificans ATCC 51888]
          Length = 503

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/184 (20%), Positives = 67/184 (36%), Gaps = 29/184 (15%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       LAIA+ ++       RN +  D         +            
Sbjct: 45  SIPLLSSAMDTVTEARLAIAMAQAGGIGVLHRNLTIEDQA--RHVALVKRYESGIV---- 98

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----------EGQKLKGIITEGDIFRN 275
              +   +     L +A+ ++++     V VV+             KL GI+T  D+   
Sbjct: 99  --LNPVTISPRKTLGEALKLMADNGVTGVPVVESSSEGPDGSAGKGKLVGILTNRDVRFA 156

Query: 276 FHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              D     V ++M K N   +  +     A +LL Q+ I  L+VVD+    IG++   D
Sbjct: 157 VRVD---QPVSELMTKTNLVTVKRNVSQDEAKRLLHQNRIEKLIVVDEHNNCIGLITVKD 213

Query: 335 LLRF 338
           + + 
Sbjct: 214 IEKA 217


>gi|304321739|ref|YP_003855382.1| IMP dehydrogenase [Parvularcula bermudensis HTCC2503]
 gi|303300641|gb|ADM10240.1| IMP dehydrogenase [Parvularcula bermudensis HTCC2503]
          Length = 491

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 71/202 (35%), Gaps = 22/202 (10%)

Query: 151 VVACHADIVLTLPKEPESCPHGLA----PTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           ++   A  VL      +S          P  S+ M       +AIA+ +          V
Sbjct: 13  LLEPQASSVLPTEVNVQSKLTSRITLNIPILSSAMDTVTEAEMAIAMAQEGGIG-----V 67

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDE--- 259
           LH    +         V      + +          L +A  I++ +      VV++   
Sbjct: 68  LHRNMSIEEQAEHVRRVKRYESGMVVAPFTLCPDSTLGEAKAIMATRNISGFPVVEDPDE 127

Query: 260 --GQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISV 316
               +L G++T  DI      D     V ++M  +N   +          +++ +  I  
Sbjct: 128 TGRGRLVGVLTNRDIRFA---DDLGQPVREIMTSENLATVKPGASQEEVREIVHRRRIER 184

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           ++VVDD  + IG++   D+++ 
Sbjct: 185 VIVVDDEYRCIGLITVKDMMKL 206


>gi|227822410|ref|YP_002826382.1| hypothetical protein NGR_c18650 [Sinorhizobium fredii NGR234]
 gi|227341411|gb|ACP25629.1| conserved hypothetical protein [Sinorhizobium fredii NGR234]
          Length = 139

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNT 282
               +  +     L     I+ E+  G + V  E  +L G++T+ DI  R     +D+++
Sbjct: 7   MHSGVRWIGPETDLRTIARIMKEEDIGALPV-GENDRLIGMVTDRDITLRALANGRDVSS 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L+  DVM +          +  A+ L+    I  L V++D ++ +G++   D+
Sbjct: 66  LTARDVMTREVVYCRTSESVEDAIHLMESKKIRRLPVINDDKRMVGMLSMGDI 118



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           E+ M    + I  +T L    +++++ +I  L V  +  + IG+V   D+ LR 
Sbjct: 4   EEAMHSGVRWIGPETDLRTIARIMKEEDIGALPV-GENDRLIGMVTDRDITLRA 56


>gi|225874855|ref|YP_002756314.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium capsulatum
           ATCC 51196]
 gi|225793061|gb|ACO33151.1| inosine-5'-monophosphate dehydrogenase [Acidobacterium capsulatum
           ATCC 51196]
          Length = 507

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 70/169 (41%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    S ++    ++
Sbjct: 42  NIPLLSAAMDTVTESRLAIAMAQQGGIGIVHRNLTIEEQAGEIDKVKRSESGMIVDPVTM 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    + DA+ ++   +   V V    +KL GI+T  D+      D+    + +VM 
Sbjct: 102 ---EPEQLISDALDVMRRYKISGVPVT-RNKKLVGILTNRDLRFETRTDV---PIGEVMT 154

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K +   +   T L  A ++L  H +  L+VV+D  +  G++   D+ + 
Sbjct: 155 KEHLITVPVGTTLEQAEEILHHHRVEKLLVVNDQYELKGLITVKDIQKK 203


>gi|126178295|ref|YP_001046260.1| signal-transduction protein [Methanoculleus marisnigri JR1]
 gi|125861089|gb|ABN56278.1| putative signal-transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 150

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF--HKD 279
           V    + +  V    P ++   I+ EK  G V VV    +  GI+T+ D+  R     K+
Sbjct: 4   VKCCREQVVAVSPDTPAVEVAKIMGEKNVGSVVVVTGDNRPTGILTDRDLAVRVMAQEKN 63

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +   +++ ++     +   +  A+Q +    I  + +VDD  + IGIV   D++R
Sbjct: 64  PGEVRASEILTRDVITFQDSMGIYEAIQKMTNEGIRRMPIVDDAGRLIGIVTMDDIVR 121



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           + +AI  ++ +    + +VD+  +L GI+T  DI R   +++
Sbjct: 86  IYEAIQKMTNEGIRRMPIVDDAGRLIGIVTMDDIVRMLGEEM 127


>gi|304398575|ref|ZP_07380447.1| inosine-5'-monophosphate dehydrogenase [Pantoea sp. aB]
 gi|304353786|gb|EFM18161.1| inosine-5'-monophosphate dehydrogenase [Pantoea sp. aB]
          Length = 488

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQADEVRKVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V    PL D   +     F    VV+   +L GIIT  D+   F  DL +  V  VM 
Sbjct: 98  QTVLPTTPLADVKVLTERNGFAGYPVVNRDNELVGIITGRDVR--FVTDL-SQPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLHKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|220925988|ref|YP_002501290.1| CBS domain containing membrane protein [Methylobacterium nodulans
           ORS 2060]
 gi|219950595|gb|ACL60987.1| CBS domain containing membrane protein [Methylobacterium nodulans
           ORS 2060]
          Length = 246

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 53/131 (40%), Gaps = 27/131 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V+   PL  A+ ++ EKR   + V+D    + GI+TEGD+                    
Sbjct: 14  VRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLLARPELGTARPKPNWVQYLI 73

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                   + ++     V DVM K       DT L   + L+ +  I  + VVD   + I
Sbjct: 74  SPGRLAEAYARE-RGRQVGDVMTKEVVTASPDTPLDEIVDLMARRRIKRVPVVDK-GRMI 131

Query: 328 GIVHFLDLLRF 338
           GIV   DLLR 
Sbjct: 132 GIVTRADLLRA 142



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M +    +  D  L +A+ L+ +  IS L V+D     IGIV   DLL
Sbjct: 1   MRARDIMTEEVTGVRADLPLELAVALMLEKRISGLPVLDPDGAVIGIVTEGDLL 54



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           PG             +    +  +V      PL + + +++ +R   V VVD+  ++ GI
Sbjct: 75  PGRLAEAYARERGRQVGDVMTKEVVTASPDTPLDEIVDLMARRRIKRVPVVDK-GRMIGI 133

Query: 267 ITEGDIFRNFHKDLNTL 283
           +T  D+ R   + L   
Sbjct: 134 VTRADLLRALRRALEQA 150


>gi|78223496|ref|YP_385243.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
           GS-15]
 gi|78194751|gb|ABB32518.1| inosine-5'-monophosphate dehydrogenase [Geobacter metallireducens
           GS-15]
          Length = 491

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +    +    V  S   + +
Sbjct: 42  NIPLVSAAMDTVTEARTAICMAREGGIG-----IIHKNLTIEEQAMEVDKVKKSESGMIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ I+ + R   V V +   KL GI+T  D+   F  DLN L +   
Sbjct: 97  DPITMRPNQKIHEALAIMEKYRISGVPVTNAKGKLVGILTNRDLR--FETDLN-LPISAR 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K     +   T L  A + L+Q  +  L+VVDD +   G++   D+
Sbjct: 154 MTKKRLVTVAVGTTLEEAKEHLKQTRVEKLLVVDDDKNLKGLITIKDI 201


>gi|206971710|ref|ZP_03232660.1| transcriptional regulator, RpiR family [Bacillus cereus AH1134]
 gi|206733695|gb|EDZ50867.1| transcriptional regulator, RpiR family [Bacillus cereus AH1134]
          Length = 284

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 70/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +   GL      L          AV  ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSHITGLQDTLHLLNET---ALEQAVRALQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++ + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSENSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKVRGAKIIAITSYKKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|220921292|ref|YP_002496593.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium nodulans
           ORS 2060]
 gi|219945898|gb|ACL56290.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium nodulans
           ORS 2060]
          Length = 497

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++          L P  +   +            +   
Sbjct: 45  NLPIIASAMDTVTEARMAIAMAQNGGLGVIH-RNLEPQEQAEQVRQVKKYESGMVLNPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++ +     + VV+ G      KL GI+T  D       +     + +
Sbjct: 104 IHPDETLADAHLLMRQNGISGIPVVERGPNGSKGKLVGILTNRDTRFATDPN---QPIAE 160

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 161 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|294508474|ref|YP_003572532.1| Conserved hypothetical protein containing CBS domain [Salinibacter
           ruber M8]
 gi|294344802|emb|CBH25580.1| Conserved hypothetical protein containing CBS domain [Salinibacter
           ruber M8]
          Length = 237

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-- 277
           A   +H   ++        + D I  ++E   G + VV     + GI TE D  R     
Sbjct: 91  AKGALHDPTTVLTAAPQDSVYDCIDRMAEIGVGSI-VVTADGAIAGIFTERDHMRKMALE 149

Query: 278 -KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     +V+ VM ++   +     L  A+  +R      L VVD   +  GI+   D +
Sbjct: 150 GRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVDADGQLSGIISMRDCM 209

Query: 337 R 337
           R
Sbjct: 210 R 210



 Score = 43.7 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 17/80 (21%), Positives = 30/80 (37%), Gaps = 2/80 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   +      G      +      + +  V     L DA+  + + +   + VVD
Sbjct: 137 FTERD--HMRKMALEGRAPRDTAVQTVMTEDVATVTPAQSLEDALDRMRDLQCRHLPVVD 194

Query: 259 EGQKLKGIITEGDIFRNFHK 278
              +L GII+  D  R   +
Sbjct: 195 ADGQLSGIISMRDCMRQLSE 214


>gi|150398928|ref|YP_001322695.1| homoserine O-acetyltransferase [Methanococcus vannielii SB]
 gi|150011631|gb|ABR54083.1| homoserine O-acetyltransferase [Methanococcus vannielii SB]
          Length = 492

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/193 (16%), Positives = 66/193 (34%), Gaps = 5/193 (2%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T       A        +     S           I+       + +   E ++   +D
Sbjct: 290 LTKNGSLSDAFEKLSAKIMIVSINSDWLYTPEEAKEIVSAMSTSGINVKYHEIKSIYGHD 349

Query: 204 FYVLHPGGK---LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +++  G     +               +   +     +  A +++  K    + VV   
Sbjct: 350 AFLIENGQMSYIISEFLSEKIVENIMTKNFSTIYENETIKKAASLMVSKNITHIPVVSNE 409

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            KL GIIT  D+ ++  ++  +  + +  +M KN      D  +      ++++NIS L 
Sbjct: 410 NKLLGIITAWDVSKSIAEENSIENIKISQMMTKNVITAFIDDKIEKIAIKMQEYNISCLP 469

Query: 319 VVDDCQKAIGIVH 331
           VVD     IG++ 
Sbjct: 470 VVDQNGLVIGMIS 482


>gi|332991572|gb|AEF01627.1| Signaling protein [Alteromonas sp. SN2]
          Length = 609

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMIKNP 293
             P+  A  ++++ R   + +  E  +L GI+T+ D+  R     +     V  VM  +P
Sbjct: 162 NTPIQQAAQLMTDNRVSSLLIT-EAGQLVGIVTDRDLRSRVVAAGVALTNPVSSVMTSSP 220

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLR 337
             +  +  L  AM L+ + NI  L ++D      +G+V   D++R
Sbjct: 221 ANVASNLTLFDAMALMTEKNIHHLPILDKDSHEPVGMVTASDIVR 265



 Score = 39.1 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL----LRFGI 340
           D+  K P     +T +  A QL+  + +S L++  +  + +GIV   DL    +  G+
Sbjct: 150 DLTEKAPIGTDVNTPIQQAAQLMTDNRVSSLLIT-EAGQLVGIVTDRDLRSRVVAAGV 206



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRN 275
           V     L DA+ +++EK    + ++D+   +  G++T  DI R+
Sbjct: 223 VASNLTLFDAMALMTEKNIHHLPILDKDSHEPVGMVTASDIVRH 266


>gi|306832476|ref|ZP_07465628.1| inosine-5'-monophosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325979501|ref|YP_004289217.1| inosine 5'-monophosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
 gi|304425376|gb|EFM28496.1| inosine-5'-monophosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|325179429|emb|CBZ49473.1| inosine 5'-monophosphate dehydrogenase [Streptococcus gallolyticus
           subsp. gallolyticus ATCC BAA-2069]
          Length = 493

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIVTAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIQEQAEEIRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D +T   +
Sbjct: 100 DPFFLTPKHSVSEAEELMQRYRISGVPIVETLENRKLVGIITNRDMR--FISDYHTPISK 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSEKLVTAPVGTDLETAERILHEHRIEKLPLVDEAGRLSGLITIKDI 206


>gi|288906439|ref|YP_003431661.1| inosine-monophosphate dehydrogenase [Streptococcus gallolyticus
           UCN34]
 gi|288733165|emb|CBI14746.1| inosine-monophosphate dehydrogenase [Streptococcus gallolyticus
           UCN34]
          Length = 493

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIVTAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIQEQAEEIRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D +T   +
Sbjct: 100 DPFFLTPKHSVSEAEELMQRYRISGVPIVETLENRKLVGIITNRDMR--FISDYHTPISK 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSEKLVTAPVGTDLETAERILHEHRIEKLPLVDEAGRLSGLITIKDI 206


>gi|311744730|ref|ZP_07718527.1| inosine-5'-monophosphate dehydrogenase [Aeromicrobium marinum DSM
           15272]
 gi|311312039|gb|EFQ81959.1| inosine-5'-monophosphate dehydrogenase [Aeromicrobium marinum DSM
           15272]
          Length = 503

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            VLH    L         V  +      
Sbjct: 47  KVPLVSAAMDTVTESRMAIAMARQGGIG-----VLHRNLSLEDQAYQVDLVKRTQTGIIS 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L D   I  E R   + VVD    L GIIT  D+      +  T  V+++
Sbjct: 102 NPVTIGPDATLEDLDRICGEYRVSGLPVVDPDNCLLGIITNRDLRFTPLAEWATTKVDEM 161

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P            A  LLR+H    L +VDD  +  G++   D ++
Sbjct: 162 MTPMPLITGDVGISREDATLLLRKHKRERLPLVDDQGRLAGLITVKDFVK 211


>gi|261403128|ref|YP_003247352.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261370121|gb|ACX72870.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 194

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +             +   K    + D   I++E   G V +V E  K  GI+TE DI 
Sbjct: 1   MKVECDIPISEVMSFPVITAKKDMSVYDIANIMTEHNIGAVVIV-EDNKPVGILTERDIV 59

Query: 273 FRNFHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L    V  E+VM K    I ++  +T A +++ ++ +  L VV D    +GI+
Sbjct: 60  KRVVSKNLKPKEVLAEEVMSKKIITIHQNASITEAAKIMAKYGVKRLPVVKDGN-LMGII 118

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 119 TQSDIIKI 126


>gi|149173046|ref|ZP_01851677.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
 gi|148847852|gb|EDL62184.1| hypothetical protein PM8797T_27689 [Planctomyces maris DSM 8797]
          Length = 144

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               + L+     +  A   ++ +  G + V+DE     G+IT+ D+        +D   
Sbjct: 7   CSREVDLIDADESVQVAADRMNSRNVGTLIVLDEESHPIGMITDRDLALRIVGKARDSIQ 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V +VM + P  + E+T + +A+  +R      L VVD+  K +G++   D+L  
Sbjct: 67  TLVSEVMTRFPDNVNEETTIELALSKMRAGGFRKLPVVDNEGKLVGVLTLDDILEL 122



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++V  +  +   +I  D  + VA   +   N+  L+V+D+    IG++   DL
Sbjct: 1   MTVGRICSREVDLIDADESVQVAADRMNSRNVGTLIVLDEESHPIGMITDRDL 53



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 2/82 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D  +   G    ++    S+VM        V     +  A++ +    F  + VVD
Sbjct: 48  ITDRDLALRIVGKARDSIQTLVSEVMTRFPDN--VNEETTIELALSKMRAGGFRKLPVVD 105

Query: 259 EGQKLKGIITEGDIFRNFHKDL 280
              KL G++T  DI      + 
Sbjct: 106 NEGKLVGVLTLDDILELLSTEF 127


>gi|92117451|ref|YP_577180.1| signal-transduction protein [Nitrobacter hamburgensis X14]
 gi|91800345|gb|ABE62720.1| putative signal-transduction protein with CBS domains [Nitrobacter
           hamburgensis X14]
          Length = 242

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN---- 275
                    +  V     ++DA   + ++    + V++   KL GII+EGD I R     
Sbjct: 2   RAHQIMTRQVTTVNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIRRAEIGT 61

Query: 276 -------------FHKDLNTL------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                          +D +         V ++M  NP  + EDTLL   +  + +++I  
Sbjct: 62  QRRRARWLKFLLGAGRDASDFVHEQGRKVGEIMTPNPCTVSEDTLLEDIVTTMEKNSIKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+    + +GIV   +LL+ 
Sbjct: 122 LPVM-RGDQIVGIVTRANLLQA 142



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  DT +  A   + + +IS L V++   K +GI+   D +R
Sbjct: 1   MRAHQIMTRQVTTVNPDTTIVDAANTMLKQHISGLPVINAAGKLVGIISEGDFIR 55


>gi|85726179|gb|ABC79612.1| IMP dehydrogenase [Borrelia hermsii DAH]
          Length = 485

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/196 (18%), Positives = 77/196 (39%), Gaps = 6/196 (3%)

Query: 143 AITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S++   + +    + L  +         P  S+ M       +AIA+ +    
Sbjct: 9   ALTFDDVSLIPRKSSVLPSNVDLRTKLTKNISLNIPFLSSAMDTVTESRMAIAIAKEGGM 68

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
                 +     +     V A        +   +     + +A  ++S+ +   + V D+
Sbjct: 69  GIIHKNITIEAQRKEVEIVKAYHRTGIIKNPITIDENANVQEARILISKHKISALPVTDK 128

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             K+ G++T  DI      ++    V + M K      ED  LT A ++L +H I  L++
Sbjct: 129 TGKILGLVTSRDIKYITDDNV---PVMNAMTKKLITAKEDITLTEAKEILSKHKIEKLLI 185

Query: 320 VDDCQKAIGIVHFLDL 335
           VD+     G++   D+
Sbjct: 186 VDEANNLRGLITCKDI 201


>gi|91792627|ref|YP_562278.1| inositol-5-monophosphate dehydrogenase [Shewanella denitrificans
           OS217]
 gi|91714629|gb|ABE54555.1| inosine-5'-monophosphate dehydrogenase [Shewanella denitrificans
           OS217]
          Length = 488

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  +    + ++    + 
Sbjct: 41  NIPLVSAAMDTVTESRLAIAIAQEGGLGFIHKNMSIEQQAEEVRKVKSYEAGIVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     L D + +L+EK  F    VV++  +L GIIT  D+   F  D +  +V+D+M
Sbjct: 100 --VTPSTTLAD-LRVLTEKNGFAGYPVVNDAHELVGIITGRDVR--FVTDWSK-TVDDMM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L    +L+  + I  ++VVD   K  G++   D  + 
Sbjct: 154 TPKSRLVTVAEGTKLDEVQKLMHLNRIEKVLVVDANFKLKGLITVKDFEKA 204


>gi|119774127|ref|YP_926867.1| acetoin utilization protein AcuB [Shewanella amazonensis SB2B]
 gi|119766627|gb|ABL99197.1| acetoin utilization protein AcuB, putative [Shewanella amazonensis
           SB2B]
          Length = 140

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V++   L     I  +  F  + VVDE   L G+++E D+ R     +            
Sbjct: 16  VEMDDRLQLVKEIFDQASFHHLPVVDEDGTLSGMLSERDLLRAISPHIGAIGETNRDQET 75

Query: 283 --LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V  VM + P  I     L  A  L+ +++I  L V+ +  K +GI+ + DLLR 
Sbjct: 76  LLKRVHQVMTREPVTIAPHKSLDDASLLMLEYSIGSLPVL-EDGKLVGIITWKDLLRA 132



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            LS+ D+M+     +  D  L +  ++  Q +   L VVD+     G++   DLLR 
Sbjct: 2   ELSIADIMVTRVVTVEMDDRLQLVKEIFDQASFHHLPVVDEDGTLSGMLSERDLLRA 58



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R  S +   +        TL      VM        +     L DA  ++ E   G + V
Sbjct: 57  RAISPHIGAIGETNRDQETLLKRVHQVM--TREPVTIAPHKSLDDASLLMLEYSIGSLPV 114

Query: 257 VDEGQKLKGIITEGDIFRNF 276
           + E  KL GIIT  D+ R +
Sbjct: 115 L-EDGKLVGIITWKDLLRAY 133


>gi|312602131|ref|YP_004021976.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
 gi|312169445|emb|CBW76457.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
          Length = 185

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 61/138 (44%), Gaps = 8/138 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
               P    G      + ++ S     +  +     + DA+  ++EK+ G + VV E  K
Sbjct: 29  ARTAPAQ-GGHPMATVAQILKSKPDTTVYTIDASALVYDAMKRMAEKQIGAL-VVTENGK 86

Query: 263 LKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + GI+TE D  R      +     +V D+M ++ + +  +      M L+ +H +  L V
Sbjct: 87  IVGIVTERDYARKIVLMDRSSKATAVRDIMTRDVRYVRPEDSAQGCMALVTEHRMRHLPV 146

Query: 320 VDDCQKAIGIVHFLDLLR 337
           +D   + +G++   DL++
Sbjct: 147 ID-GGRLVGMISIGDLVK 163



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 34/80 (42%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M     +  V+        + +++E R   + V+D 
Sbjct: 92  TERDYARKIVLMDRSSKATAVRDIM--TRDVRYVRPEDSAQGCMALVTEHRMRHLPVID- 148

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G +L G+I+ GD+ ++   D
Sbjct: 149 GGRLVGMISIGDLVKHIISD 168


>gi|260550350|ref|ZP_05824562.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
 gi|260406662|gb|EEX00143.1| CBS domain-containing protein [Acinetobacter sp. RUH2624]
          Length = 143

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AITI++EK  G + VV EG+K+ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAITIMAEKGIGAL-VVAEGEKVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TAKVITVGLNNTVEECLQLMTDRHLRHLPVLDNE-KLVGFISIGDLVKA 125



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A+ ++ +  I  L VV + +K +GI+   D  R 
Sbjct: 18  TISPEATVLEAITIMAEKGIGAL-VVAEGEKVVGILSERDYTRK 60



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                +       +        +  V +   + + + +++++    + V+D  +KL G I
Sbjct: 59  RKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLD-NEKLVGFI 117

Query: 268 TEGDIFRNFHKDLNTL 283
           + GD+ +   +D   L
Sbjct: 118 SIGDLVKAAMEDQKVL 133


>gi|328950006|ref|YP_004367341.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
           14884]
 gi|328450330|gb|AEB11231.1| CBS domain containing protein [Marinithermus hydrothermalis DSM
           14884]
          Length = 209

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 9/126 (7%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   DVMHS      +     L +A  ++  +    + V+D   +L GI+T+ DI     
Sbjct: 1   MLVRDVMHSPVIT--IAADATLAEANEVMWRQGIRHLPVMD-QGRLVGILTDRDIRLATS 57

Query: 278 K-----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +        T  VE VM            +  A Q++RQH I  L V+ + ++ +GIV  
Sbjct: 58  RLAPVPFTETARVEAVMTAPVLTADPLDPVEEAAQVMRQHKIGSLPVL-EGRELVGIVTG 116

Query: 333 LDLLRF 338
           +DLL  
Sbjct: 117 IDLLDA 122


>gi|329119248|ref|ZP_08247935.1| transcriptional regulator HexR [Neisseria bacilliformis ATCC
           BAA-1200]
 gi|327464595|gb|EGF10893.1| transcriptional regulator HexR [Neisseria bacilliformis ATCC
           BAA-1200]
          Length = 299

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 61/173 (35%), Gaps = 7/173 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      +      L      +   AV  +   + R+   G+G SG +          
Sbjct: 114 KVLGNTAAAILGARRFLDE---AELEKAVSLLHGAR-RIEFYGMGNSGIVAQDAQHKFFR 169

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              +++  D I+V+S SG+   L  +   A+     +IA+T   
Sbjct: 170 FGISAVAYSDLHIQLMAAAVLSPQDTIVVISKSGTPAGLLEVAAAAKENGASVIAVT-RA 228

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            S +A  AD VL      +       P  S ++QL + D LAI L      + 
Sbjct: 229 GSPLAAAADCVLN--VFTQEDSERYTPMISRLLQLTVIDILAIGLALRLGETA 279


>gi|126460347|ref|YP_001056625.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126250068|gb|ABO09159.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 286

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 52/111 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +  + K   PL + I +  EKR+  + V+DE ++  G++T   +            V
Sbjct: 166 MTPNPIVAKPSDPLGNYIRLFIEKRYRGIPVIDESKRPIGLLTASKVMEAVASCRLDAKV 225

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D M+ NP  + E+  +   ++L+    I  ++VVD   + +GI+   D+L
Sbjct: 226 GDYMMPNPPTVHEEEDIHEVIRLMVTSGIGRVLVVDSEDRLVGIITRTDVL 276



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   S +++M  NP V      L   ++L  +     + V+D+ ++ IG++ 
Sbjct: 157 IPRTSAKNIMTPNPIVAKPSDPLGNYIRLFIEKRYRGIPVIDESKRPIGLLT 208



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   + P V     + + I ++     G V VVD   +L GIIT  D+     
Sbjct: 228 YMMPNPPTVHEEEDIHEVIRLMVTSGIGRVLVVDSEDRLVGIITRTDVLLRIA 280


>gi|90425526|ref|YP_533896.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
 gi|90107540|gb|ABD89577.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisB18]
          Length = 242

 Score = 87.6 bits (216), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 51/142 (35%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  V     ++DA  I+  +    + VV+   +L GII+EGD  R      
Sbjct: 2   RAHQIMTRQVVTVSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIRRAEIGT 61

Query: 281 NTL------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                       V ++M  +P  +  +  +   ++ + +H++  
Sbjct: 62  ERKRGRWLRLLLGPGQSASDFVHEHGRKVGEIMTTHPHTVNAEATVAEIVKAMEKHHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+    + +GIV   +LL+ 
Sbjct: 122 LPVM-QDGRMVGIVTRKNLLQA 142



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  D  +  A  ++   ++S L VV+   + IGI+   D +R
Sbjct: 1   MRAHQIMTRQVVTVSPDASIVDAANIMLSQHVSGLPVVNAAGELIGIISEGDFIR 55


>gi|117927575|ref|YP_872126.1| inosine-5'-monophosphate dehydrogenase [Acidothermus cellulolyticus
           11B]
 gi|117648038|gb|ABK52140.1| inosine-5'-monophosphate dehydrogenase [Acidothermus cellulolyticus
           11B]
          Length = 516

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 9/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+           +  +    G++  +    + ++    + 
Sbjct: 66  RIPLLSSAMDTVTEARMAIAMARQGGLGVLHRNLSIEEQAGQVDLVKRSEAGMV---TNP 122

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   + D   + +      V VVD    L GI+T  D+   F  D  T  V DVM 
Sbjct: 123 VTCGPDDSIADVERLCARYHISGVPVVDPRGVLLGIVTNRDMR--FETD-PTRPVRDVMT 179

Query: 291 KNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             P V        T A++LLR++ +  L ++DD     G++   D  +
Sbjct: 180 PMPLVTAPVGVDDTTALELLRRNKVEKLPLIDDNGVLRGLITVKDFTK 227


>gi|171057111|ref|YP_001789460.1| signal-transduction protein [Leptothrix cholodnii SP-6]
 gi|170774556|gb|ACB32695.1| putative signal-transduction protein with CBS domains [Leptothrix
           cholodnii SP-6]
          Length = 158

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
                +        + DA+ +++EK  G + V  EG++L GI+TE D  R      +   
Sbjct: 23  KPQAVVHTTTPSTTVFDAVKLMAEKGIGALLVT-EGEQLVGIVTERDYARKVALMSRSSR 81

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M  +   +  D   +  M L+ ++ +  L V+    K +G++   DL++
Sbjct: 82  ETPVRDIMTADVMFVRPDQTSSECMALMTENRLRHLPVM-ADGKLLGLISIGDLVK 136



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M +      V+      + + +++E R   + V+  
Sbjct: 65  TERDYARKVALMSRSSRETPVRDIMTADVMF--VRPDQTSSECMALMTENRLRHLPVM-A 121

Query: 260 GQKLKGIITEGDIFRNF 276
             KL G+I+ GD+ ++ 
Sbjct: 122 DGKLLGLISIGDLVKDI 138


>gi|150401620|ref|YP_001325386.1| inosine-5'-monophosphate dehydrogenase [Methanococcus aeolicus
           Nankai-3]
 gi|150014323|gb|ABR56774.1| inosine-5'-monophosphate dehydrogenase [Methanococcus aeolicus
           Nankai-3]
          Length = 491

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 72/178 (40%), Gaps = 8/178 (4%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
            L          +   ++A+  ++  D A+AIA          +  V     ++  +   
Sbjct: 33  DLSVNLCGLKLNIPVVSAAMDTVSEKDMAVAIARKGGIGVIHRNMTVEEQVNQIKAVKKA 92

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              ++     +  +     + DA  ++ +     + VV+E  +L GIIT  DI    +K 
Sbjct: 93  EDLIVR---DVYTISPDSTVADAQRLMEQVSISGLPVVNENDELVGIITTRDIKYIKNK- 148

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                ++D M K   V  EDT    A +++  + I  L +V   +K IG++   D+L+
Sbjct: 149 --KTVLKDCMTKKLIVGDEDTTHEKATEIMYNYKIERLPIV-KNKKLIGMMTLRDILK 203


>gi|320354975|ref|YP_004196314.1| CBS domain-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320123477|gb|ADW19023.1| CBS domain containing protein [Desulfobulbus propionicus DSM 2032]
          Length = 432

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                +  V    P+ +   I+ E++   V VV+E  +L+GI+   D+ +          
Sbjct: 314 MMSFPVTTVPPDAPMHEIRRIMEEEKIRGV-VVEEDDRLQGIVVLWDLKKLRLTKQWNSP 372

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+  M +    I  + L + A  L+ Q NI  L VV   +K IGIV   D++
Sbjct: 373 VKAFMNRKVTTIAPEALASEAADLMVQKNIGHLPVV-QGEKVIGIVTRTDVI 423



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 33/79 (41%), Gaps = 6/79 (7%)

Query: 267 ITEGDIFRNFHKDLNTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +T G I +     L+ +      V D+M      +  D  +    +++ +  I   +VV+
Sbjct: 288 LTAGVIRQKIIAALHEVQRGGALVADMMSFPVTTVPPDAPMHEIRRIMEEEKIRG-VVVE 346

Query: 322 DCQKAIGIVHFLDLLRFGI 340
           +  +  GIV   DL +  +
Sbjct: 347 EDDRLQGIVVLWDLKKLRL 365



 Score = 36.0 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           T    +         +  +       +A  ++ +K  G + VV +G+K+ GI+T  D+
Sbjct: 366 TKQWNSPVKAFMNRKVTTIAPEALASEAADLMVQKNIGHLPVV-QGEKVIGIVTRTDV 422


>gi|296284630|ref|ZP_06862628.1| CBS [Citromicrobium bathyomarinum JL354]
          Length = 121

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK-DLNTLSVEDVMIKNPKVILEDTLLT 303
           + +   G + VVD+   L G++T+ DI  R   K + +   VE+VM  +P  +  D  + 
Sbjct: 1   MVDNDCGEIPVVDDSGALVGVVTDRDIACRCVAKGNSSDQRVEEVMTSSPVTVTADASVD 60

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  + +  L V+DD  K  GIV   D+ R
Sbjct: 61  ECCTKMEDNQVRRLPVIDDEGKCCGIVAQADIAR 94


>gi|56419625|ref|YP_146943.1| hypothetical protein GK1090 [Geobacillus kaustophilus HTA426]
 gi|56379467|dbj|BAD75375.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 141

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +        L +A   + +   G + ++D+  +L G+IT+ DI       K   + 
Sbjct: 8   MSTDVQYCTPLDNLYEAAVKMRDFNVGAIPIIDD-GRLVGMITDRDIVVRGMAEKRPGST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V +VM ++   +  D  +  A  ++ +H I  L VV +  + +GI+   DL
Sbjct: 67  AVTEVMSRDLVTLSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIISLGDL 117



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V DVM  + +       L  A   +R  N+  + ++DD  + +G++   D++
Sbjct: 2   QTVRDVMSTDVQYCTPLDNLYEAAVKMRDFNVGAIPIIDD-GRLVGMITDRDIV 54



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 9/89 (10%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
            I D   + ++  R+          PG    T  +    V         +     +  A 
Sbjct: 38  IIDDGRLVGMITDRDIVVRGMAEKRPGSTAVTEVMSRDLVT--------LSPDDSVQKAA 89

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            +++  +   + VV E  +L GII+ GD+
Sbjct: 90  DMMARHQIRRLPVV-ENGRLVGIISLGDL 117


>gi|325528776|gb|EGD05835.1| signal-transduction protein [Burkholderia sp. TJI49]
          Length = 153

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 5/113 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLS 284
            +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +      
Sbjct: 17  RTIYTVTKADLVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKATR 75

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VE++M    + +         M L+ +H +  L V+DD  K +G++   DL++
Sbjct: 76  VEEIMTAKVRYVEPSQTTDECMALMTEHRMRHLPVLDD-GKLVGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQTTDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+I+ GD+ ++   D
Sbjct: 114 -GKLVGLISIGDLVKSVIAD 132


>gi|239503946|ref|ZP_04663256.1| CBS domain pair family protein [Acinetobacter baumannii AB900]
          Length = 143

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 57/109 (52%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AITI++EK  G + VV EG+++ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   ++L+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TAKVITVGLNNTVEECLRLMTDRHLRHLPVLDN-GKLVGFISIGDLVKA 125



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 11/76 (14%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                +       +        +  V +   + + + +++++    + V+D   KL G I
Sbjct: 59  RKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLRLMTDRHLRHLPVLD-NGKLVGFI 117

Query: 268 TEGDIFRNFHKDLNTL 283
           + GD+ +   +D   L
Sbjct: 118 SIGDLVKAAMEDQKVL 133



 Score = 39.5 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A+ ++ +  I  L VV + ++ +GI+   D  R 
Sbjct: 18  TISPEATVLEAITIMAEKGIGAL-VVAEGEQVVGILSERDYTRK 60


>gi|110597879|ref|ZP_01386161.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM
           13031]
 gi|110340456|gb|EAT58942.1| inosine-5'-monophosphate dehydrogenase [Chlorobium ferrooxidans DSM
           13031]
          Length = 497

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 16/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  S        +  +     ++  +    S ++ +  ++
Sbjct: 41  KIPLVSAAMDTVTESDLAIALARSGGIGIIHKNLSIEEQAREVARVKRFESGIIRNPFTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTL 283
                   + DA+ ++       + V+       D  QKLKGI+T  D+     K     
Sbjct: 101 Y---EDATMQDALDLMLRHSISGIPVIARPKFEGDTSQKLKGIVTNRDLR---IKPELDA 154

Query: 284 SVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +M  KN     ED  L  A ++L  + I  L++ D      G++ F D+ +
Sbjct: 155 KIASIMTSKNLITAREDVDLEKAEEILLFNKIEKLLITDSDGNLKGLITFKDVQK 209


>gi|72162722|ref|YP_290379.1| transcriptional regulator [Thermobifida fusca YX]
 gi|71916454|gb|AAZ56356.1| putative transcriptional regulator [Thermobifida fusca YX]
          Length = 315

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 73/177 (41%), Gaps = 6/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ V    +   A+ R +    S L  E        +E +   + R+ I G+G S  + S
Sbjct: 117 DTLVTVVQKIAYADARAVEDTGSQLDIE---TLQRVIELLDGAR-RIDIYGVGASAFVAS 172

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                L   G  S     A A      ++   D+ + +S SGS+ +    L  ARR    
Sbjct: 173 DFQQKLHRIGMISHAWTDAHAMLTSAAVLRPGDVAVGISHSGSTSDTVGALAEARRKGAS 232

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            IAIT+  +S ++  +D +LT      +   G   T S + QL + D + + L + R
Sbjct: 233 TIAITNFPRSPISEVSDHILTTAARETTFRSGA--TASRLAQLTVIDCVFVGLAQLR 287


>gi|54024538|ref|YP_118780.1| hypothetical protein nfa25690 [Nocardia farcinica IFM 10152]
 gi|54016046|dbj|BAD57416.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 144

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G  +  V  G  +   + +L+E   G V V   G ++ GI++E D+ R  H+    
Sbjct: 7   LRRKGCEVATVTPGTTVRALLAVLAEHNIGAVVVSPGGGRISGIVSERDVVRGLHEYGAG 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L    V D+M    +    +  +    +++ +H +  L VV D  + +GIV   D+++  
Sbjct: 67  LLDTPVSDIMTTPVRTCAPEDRVDGLRRIMTEHRVRHLPVVRDD-RLVGIVSIGDVVKSA 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|228476798|ref|ZP_04061446.1| inosine-5'-monophosphate dehydrogenase [Streptococcus salivarius
           SK126]
 gi|228251535|gb|EEK10672.1| inosine-5'-monophosphate dehydrogenase [Streptococcus salivarius
           SK126]
          Length = 493

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 28/197 (14%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLKTNLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++   R   V +V+  E
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPENKVAEAEELMQRYRISGVPIVETLE 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
            +KL GIIT  D+    + D     + + M     V     T L  A  +L +H I  L 
Sbjct: 133 NRKLVGIITNRDMRFISNYD---TPISEHMTSEKLVTAPVGTDLETAESILHEHRIEKLP 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           +VD+  +  G++   D+
Sbjct: 190 LVDEEGRLSGLITIKDI 206


>gi|313127605|ref|YP_004037875.1| zn-dependent protease [Halogeometricum borinquense DSM 11551]
 gi|312293970|gb|ADQ68430.1| Zn-dependent protease [Halogeometricum borinquense DSM 11551]
          Length = 391

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           +A+A       S           K     V   DVM   + + +V I   + + +  +  
Sbjct: 221 VALAFFIYMGASSE---AQQTVMKAAFEDVTVRDVMTPREKLDVVDIRTSISELLDRMFY 277

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           +R     VV +  +L G++T  D       + +   V+DVM      I        A+  
Sbjct: 278 ERHTGYPVV-QNGRLVGMVTLNDARTVDEVERDAYIVKDVMSGELTTISPSADAMDAITT 336

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++Q+ +  L VVDD  + +G++   DL+  
Sbjct: 337 MQQNGVGRLPVVDDEGELVGLISRSDLVTA 366



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 23/45 (51%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +DAIT + +   G + VVD+  +L G+I+  D+    +
Sbjct: 324 ISPSADAMDAITTMQQNGVGRLPVVDDEGELVGLISRSDLVTALN 368


>gi|254469544|ref|ZP_05082949.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Pseudovibrio sp. JE062]
 gi|211961379|gb|EEA96574.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Pseudovibrio sp. JE062]
          Length = 608

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 50/137 (36%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F                        +    +    +  A   + + R   + V D+  +L
Sbjct: 126 FDRTQKPRSRENDLTAIPIETFMASNPLTCRPEDTVKQAAQQMRDARVSSLCVTDD-GRL 184

Query: 264 KGIITEGDIF-RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GIIT  D+  +    +L   + VE VM  NP  +    + +  + L+ +  I  + +V 
Sbjct: 185 IGIITVRDLSFKVLASELPAETLVEAVMTANPITLGPAAIGSDLLHLMMERRIGHVPIV- 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +    +G+V   DL RF
Sbjct: 244 EGGHLVGMVTQTDLTRF 260


>gi|34499375|ref|NP_903590.1| hypothetical protein CV_3920 [Chromobacterium violaceum ATCC 12472]
 gi|34105225|gb|AAQ61581.1| conserved hypothetical protein [Chromobacterium violaceum ATCC
           12472]
          Length = 144

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 50/127 (39%), Gaps = 7/127 (5%)

Query: 217 FVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 ++ S  +  LV       +  A+ +++E   G V V+ E   + GI +E D  R
Sbjct: 1   MQTVRQLLDSKPTRALVYVTPDSTVFQALQVMAENDIGAVLVM-ESGDIVGIFSERDYAR 59

Query: 275 NF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +      V D+M      +     L   M L+ +  I  L V+ + Q  +GI+ 
Sbjct: 60  RIVLQGRTSAGTKVRDIMTSRVVYVTPQQTLDECMGLMTEKRIRHLPVM-EDQTVLGILS 118

Query: 332 FLDLLRF 338
             DL+R 
Sbjct: 119 IGDLVRA 125


>gi|167646176|ref|YP_001683839.1| inosine-5'-monophosphate dehydrogenase [Caulobacter sp. K31]
 gi|167348606|gb|ABZ71341.1| inosine-5'-monophosphate dehydrogenase [Caulobacter sp. K31]
          Length = 487

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 71/172 (41%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++         +LH    +        +V      + +
Sbjct: 39  NIPLVSAAMDTVTESRLAIAMAQAGG-----MGILHRNLTVDEQADHVREVKRYESGMVI 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +   I + ++     VV+ +  KL GI+T  D+   F  D + +    
Sbjct: 94  NPLTINPDTTLAEIREIKARRKISGFPVVEAKTGKLVGILTNRDMR--FEGD-DKVPASA 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   + E      A ++LR+H I  L+VVDD  +A+G++   D+ + 
Sbjct: 151 LMTRENLITVGEGIDHREAREMLRKHKIERLIVVDDAYRAVGLITVKDIEKA 202


>gi|88608173|ref|YP_506409.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia sennetsu str.
           Miyayama]
 gi|88600342|gb|ABD45810.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia sennetsu str.
           Miyayama]
          Length = 481

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 19/170 (11%)

Query: 174 APTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  S+ M +     LAI L       +  RN +     +     K+             
Sbjct: 38  VPIVSSAMDMVTEARLAICLAKHGGIGIIHRNMTPEAQALE--IRKVKKYESWIVSD--- 92

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V     L     +  +  +  + VVDE  +L GI+T  D+   F +D ++  V 
Sbjct: 93  ---PVTVSPDDRLEKVSALKKQHGYSGLPVVDEKNRLIGILTNRDVR--FVED-SSRKVS 146

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++M  KN   + E      A  L  +H I  L+VVD+  + +G++   D+
Sbjct: 147 ELMTTKNLITVKEGISYDEARLLFHKHKIERLIVVDEEFRCVGLITVKDI 196


>gi|75762730|ref|ZP_00742563.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
 gi|74489784|gb|EAO53167.1| Transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar israelensis ATCC 35646]
          Length = 287

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|293394888|ref|ZP_06639178.1| inosine-5'-monophosphate dehydrogenase [Serratia odorifera DSM
           4582]
 gi|291422639|gb|EFE95878.1| inosine-5'-monophosphate dehydrogenase [Serratia odorifera DSM
           4582]
          Length = 532

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 86  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TDP 142

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   + +   F    VV E  +L GIIT  D+   F  DLN   V  VM 
Sbjct: 143 QTVTPSTTLQEVKELTARNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVTAVMT 199

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 200 PKDRLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 249


>gi|78043289|ref|YP_360854.1| CBS/cyclic nucleotide-binding domain-containing protein
           [Carboxydothermus hydrogenoformans Z-2901]
 gi|77995404|gb|ABB14303.1| CBS/cyclic nucleotide-binding domain protein [Carboxydothermus
           hydrogenoformans Z-2901]
          Length = 631

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----VEDVMI 290
            G  +     ++++ +   V +VD   +  GIITE D+ R    +  T +      D+M 
Sbjct: 170 PGESIKTIANLMAQHQVSSVVIVDNYNRPLGIITEHDLVRKVLAESKTPTDSLIALDIMN 229

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           KNP  I  D   +  +  + +  +  L+V ++    +GI+   DLL+
Sbjct: 230 KNPATISPDAYYSQILLEMIKKQVRHLLVTENE-TLLGIITLKDLLK 275



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 33/84 (39%), Gaps = 11/84 (13%)

Query: 266 IITEG------DIFRNFHKDLNT-----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           I+T+       +I R    D  +          +M            +     L+ QH +
Sbjct: 127 ILTDRLRDLYLEISRESQTDSYSPLNIIKKASQLMNPEVVKATPGESIKTIANLMAQHQV 186

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           S +++VD+  + +GI+   DL+R 
Sbjct: 187 SSVVIVDNYNRPLGIITEHDLVRK 210


>gi|91788058|ref|YP_549010.1| signal transduction protein [Polaromonas sp. JS666]
 gi|91697283|gb|ABE44112.1| putative signal transduction protein with CBS domains [Polaromonas
           sp. JS666]
          Length = 170

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
           +     + +     L      +  A   + E   G + V D G+KL G++T+ DI  R  
Sbjct: 1   MTTVSDLMTRGVRTLTPADT-VTSAARAMDELNVGVIPVCD-GEKLVGMVTDRDIVVRGV 58

Query: 277 HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            ++L+  +  + D+M  N +   E+  +   +  + +  I  L VVDD  + +GI+   D
Sbjct: 59  AQELDAKTTDLSDLMSTNVRTARENEDVDEVLSEMAESQIRRLPVVDDQDRLVGIISLGD 118

Query: 335 L 335
           +
Sbjct: 119 I 119



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V D+M +  + +     +T A + + + N+ V+ V D  +K +G+V   D++  G+
Sbjct: 2   TTVSDLMTRGVRTLTPADTVTSAARAMDELNVGVIPVCD-GEKLVGMVTDRDIVVRGV 58


>gi|323487799|ref|ZP_08093057.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
 gi|323398533|gb|EGA91321.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
          Length = 283

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 68/164 (41%), Gaps = 3/164 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  + +LE +LQ         A++K+   + ++   G G S  +           G    
Sbjct: 104 RSNIKTLEDTLQIVDDEAMEQAIQKLMNAR-KIDFYGNGGSAMVAMDGYHKFVRLGLHVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +         +  DD+ IV+S SGS+ ++  +L   +   + +I++T+  KS ++ 
Sbjct: 163 MNLDSHMQLMAASQLQSDDVAIVISHSGSTTDVLDVLRVLKEKGVTIISVTNFAKSPLSK 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            ADI L    E           +S I QL++ DAL   L+  R 
Sbjct: 223 EADIALYTVSEETDFRSEAL--SSRIAQLSLIDALYTNLMILRG 264


>gi|315230461|ref|YP_004070897.1| dehydrogenase [Thermococcus barophilus MP]
 gi|315183489|gb|ADT83674.1| dehydrogenase [Thermococcus barophilus MP]
          Length = 392

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE-GDIFRNF 276
              + V       P++K    L  A  ++ E     + V ++   + G+I++   + R  
Sbjct: 64  PTKAKVKDVYKPAPVIKPRDDLSHAAKLMIETDLRSLPVGEDKTNIFGVISDLAILDRVI 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     V++ M  +   +  D  +  A+  +R H IS + +V++  K  G+V   DL+
Sbjct: 124 KEEFGKRKVKEFMTTDVITLKPDDTVAKALATMRDHAISRIPIVNEEGKLEGLVTLHDLI 183



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 15/139 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +   F            +  +K    +  A+  + +     + +V+E  KL+G++T  D+
Sbjct: 123 IKEEFGKRKVKEFMTTDVITLKPDDTVAKALATMRDHAISRIPIVNEEGKLEGLVTLHDL 182

Query: 273 FRNFHKDLNT---------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              F K                     + +VMI+    IL D  +  A+  +  + I  L
Sbjct: 183 IIRFIKPRFKAQYGELVGEKIPPFSTQLREVMIRGVITILPDATIREAVATMIDNRIDGL 242

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +VV++  K +GI+   DLL
Sbjct: 243 VVVNEENKVVGILTVKDLL 261


>gi|158334195|ref|YP_001515367.1| polyA polymerase [Acaryochloris marina MBIC11017]
 gi|158304436|gb|ABW26053.1| polyA polymerase [Acaryochloris marina MBIC11017]
          Length = 902

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  IL       ++VV++  +L GI++  D+    H       V
Sbjct: 318 MSSPVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILSRRDLDIALHHGFGHAPV 377

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M    + I   T L     ++  ++I  L VV +  + +GIV   D+LR
Sbjct: 378 KGYMTAPVRTISLGTSLPEIELMMVTYDIGRLPVV-EQGQLVGIVTRTDILR 428



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+M    + I   T +  A ++L ++  S L VV+D  + +GI+   DL
Sbjct: 313 MAADLMSSPVRTIRPTTTIDQARRILLRYGHSGLSVVNDQDQLVGILSRRDL 364



 Score = 42.6 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  + +G  L +   ++     G + VV E  +L GI+T  D
Sbjct: 367 ALHHGFGHAPVKGYMTAPVRTISLGTSLPEIELMMVTYDIGRLPVV-EQGQLVGIVTRTD 425

Query: 272 IFRNFHK 278
           I R  H+
Sbjct: 426 ILRQLHQ 432


>gi|170725914|ref|YP_001759940.1| inosine 5'-monophosphate dehydrogenase [Shewanella woodyi ATCC
           51908]
 gi|169811261|gb|ACA85845.1| inosine-5'-monophosphate dehydrogenase [Shewanella woodyi ATCC
           51908]
          Length = 490

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    + 
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVT- 99

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             VK    L + + +L+EK  F    VV++  +L GIIT  D+   F  D +  +V+ VM
Sbjct: 100 --VKPTTTLDE-LKVLTEKNGFAGYPVVNDANELVGIITGRDVR--FITDWSR-TVDKVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L     L+  H +  ++VVD   K  G++   D  + 
Sbjct: 154 TPKDRLVTVPEGTKLDEVQTLMHSHRVEKVLVVDANFKLKGLITVKDFQKA 204


>gi|81427891|ref|YP_394890.1| inositol-5-monophosphate dehydrogenase [Lactobacillus sakei subsp.
           sakei 23K]
 gi|78609532|emb|CAI54578.1| Inosine-5-monophosphate dehydrogenase [Lactobacillus sakei subsp.
           sakei 23K]
          Length = 493

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 15/183 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLGVQLAKNIKLNTPIMSASMDTVTEAPMAIAMARQGGLG-----VIHKNMSIERQADE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF 273
              V  S + + +         P+  A  ++   R   V +V   +  KL GIIT  D+ 
Sbjct: 87  VLKVKRSENGVIIDPFYLTADKPVSAAEDLMRTYRISGVPIVSNLDELKLVGIITNRDLR 146

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             F  D  +  +  VM     V     T L  A Q+L+Q+ I  L +V D  +  G++  
Sbjct: 147 --FISDF-SAEIGTVMTHEALVTAPVGTSLEEAEQILQQNRIEKLPLVGDDGRLAGLITI 203

Query: 333 LDL 335
            D+
Sbjct: 204 KDI 206


>gi|170718913|ref|YP_001784083.1| inosine 5'-monophosphate dehydrogenase [Haemophilus somnus 2336]
 gi|168827042|gb|ACA32413.1| inosine-5'-monophosphate dehydrogenase [Haemophilus somnus 2336]
          Length = 487

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEAKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +  +  F    VVDE + L GIIT  D    F  DLN  +V D M 
Sbjct: 98  VTVSPTMTLTELAELAKKNGFAGYPVVDEQKGLVGIITGRDTR--FVSDLNK-TVADFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E         L+ +H +  ++VVD+  K  G++   D  + 
Sbjct: 155 PKDRLVTVKEGATREEIFHLMHEHRVEKVLVVDNSFKLKGMITLKDYQKA 204


>gi|319649062|ref|ZP_08003271.1| YbbH protein [Bacillus sp. BT1B_CT2]
 gi|317389056|gb|EFV69874.1| YbbH protein [Bacillus sp. BT1B_CT2]
          Length = 282

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 4/197 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       K   +    +     +   ++        + ++  + +     +   A++ +
Sbjct: 70  MRVAGDLMKPSDQGYRDIEPQEPLHSIVQ--KTTSNSIQAIRDTFENIDHEELQKAIQIL 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  V   GIG SG +              +            +     +D++  +S 
Sbjct: 128 INAET-VHFCGIGASGIVAQDAQQKFLRINKKATAFSDMHLVATLIANAGENDVLFAISH 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + E+   +  A++  I  I +T   +S VA  +DI L         P   A T+S +
Sbjct: 187 SGETQEIANAVRLAKKHGIKTIGLTRLGQSAVASLSDIALYTS-CSNEAPFRSAATSSRL 245

Query: 181 MQLAIGDALAIALLESR 197
            QL + D L + +   R
Sbjct: 246 TQLYMIDLLFLGMAAER 262


>gi|289767041|ref|ZP_06526419.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289697240|gb|EFD64669.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 218

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
             D++  V+ G P  +   +L E     V VVDE  +  G+++E D+             
Sbjct: 5   MSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSA 64

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 R      +      +M   P   LE   +  A++++ +H I  L+VVD   +  
Sbjct: 65  EHAEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGDGRLA 124

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 125 GVVSRSDLLR 134



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +   T       LL +++I+ + VVD+  + +G+V   DLL+ 
Sbjct: 1   MRDLMSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQK 54



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ++DA+ +++  R   + VVD   +L G+++  D+ R F +
Sbjct: 98  SVVDAVRVMARHRIKRLLVVDGDGRLAGVVSRSDLLRVFLR 138


>gi|269968065|ref|ZP_06182102.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269827311|gb|EEZ81608.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 620

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVE 286
            + +V     +      + +K     AVV   +K+ G+IT+ D+  R   K L+ +  V 
Sbjct: 165 RVAIVTAEQSIQSVANEMIDKC-SPCAVVYRDKKIVGLITDRDMTKRVIAKGLSISTPVV 223

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +PK I  D L+  A  ++ QHNI  L +V D    +G++    L++
Sbjct: 224 EVMSPDPKTIHPDDLVLHAASIMMQHNIRNLPLVRDNN-VVGVLTTTHLVQ 273


>gi|288930768|ref|YP_003434828.1| 6-phospho 3-hexuloisomerase [Ferroglobus placidus DSM 10642]
 gi|288893016|gb|ADC64553.1| 6-phospho 3-hexuloisomerase [Ferroglobus placidus DSM 10642]
          Length = 189

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 14/168 (8%)

Query: 50  SFQFHCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
                   E I AI+G  R+ + G G+SG +    A  L   G   + V           
Sbjct: 23  DINEENLNELINAIQGAKRIFVMGAGRSGFVAKAFAMRLMHLGYNVYVVGETVTP----- 77

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYAR-RFSIPLIAITSENKSVVACHADIVLTL---- 162
            I ++D++I +S SG +  +  I   A+      L+AIT    S +A  +D+V+ +    
Sbjct: 78  RIDKEDVLIAISGSGETTSVVNISKKAKEMIGSKLVAITGNPNSSLAQMSDVVVLIKGKL 137

Query: 163 PKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             E       +AP  T   +M L   D L   L+  +N SE D    H
Sbjct: 138 KNETNEELSQIAPLGTMFELMSLIFLDGLVAELMRIKNLSEKDLAERH 185


>gi|256783160|ref|ZP_05521591.1| hypothetical protein SlivT_01575 [Streptomyces lividans TK24]
          Length = 223

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
             D++  V+ G P  +   +L E     V VVDE  +  G+++E D+             
Sbjct: 10  MSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSA 69

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 R      +      +M   P   LE   +  A++++ +H I  L+VVD   +  
Sbjct: 70  EHAEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAVRVMARHRIKRLLVVDGDGRLA 129

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 130 GVVSRSDLLR 139



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V D+M      +   T       LL +++I+ + VVD+  + +G+V   DLL+ 
Sbjct: 1   MKHQRVRDLMSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQK 59



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 24/41 (58%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ++DA+ +++  R   + VVD   +L G+++  D+ R F +
Sbjct: 103 SVVDAVRVMARHRIKRLLVVDGDGRLAGVVSRSDLLRVFLR 143


>gi|221196034|ref|ZP_03569081.1| CBS domain protein [Burkholderia multivorans CGD2M]
 gi|221202708|ref|ZP_03575727.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221176642|gb|EEE09070.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221182588|gb|EEE14988.1| CBS domain protein [Burkholderia multivorans CGD2M]
          Length = 149

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/115 (30%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI ++S+K  G + V+D G  + GI+TE D  R      +    
Sbjct: 11  SGRTIYTVTKTDLVYDAIKLMSDKGIGALLVMD-GDDIAGIVTERDYARKVVLQDRSSKA 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 70  TRVEEIMTTKVRYVEPSQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 123



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M +   +  V+      + + +++E R   + V+D+
Sbjct: 52  TERDYARKVVLQDRSSKATRVEEIMTTK--VRYVEPSQTSDECMALMTEHRMRHLPVLDD 109

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 110 -GKLIGLVSIGDLVKSVIAD 128


>gi|220934200|ref|YP_002513099.1| cyclic nucleotide-binding protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219995510|gb|ACL72112.1| cyclic nucleotide-binding protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 645

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 6/136 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G  G   +  +                P+ +A+  +  +  G + +VDE     G+ T  
Sbjct: 169 GPGGDTSLNITLGERLRREPVSCLPTTPIREALETMERENVGSIVIVDEHMHPLGVFTLH 228

Query: 271 DI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+              + +VM   P  +        A  L+  H    + VV +  +  G
Sbjct: 229 DLLSRVALPGRRMDEPMGEVMSPEPITLPPSAFAFEAAMLMANHGFHHVCVV-ERGRLKG 287

Query: 329 IVHFLDLL---RFGII 341
           ++   DL    R G++
Sbjct: 288 VISERDLFSLQRVGLV 303


>gi|170746534|ref|YP_001752794.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           radiotolerans JCM 2831]
 gi|170653056|gb|ACB22111.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium
           radiotolerans JCM 2831]
          Length = 497

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+  +          L P  +   + +          +   
Sbjct: 45  NLPILASAMDTVTEAPMAIAMAANGGMGVIH-RNLEPPEQAEQVRLVKKYESGMVMNPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++   R   + VV+ G      KL GI+T  D+    +   +   V +
Sbjct: 104 IHPDETLADAFEVMKLNRISGIPVVERGPNGSRGKLVGILTNRDVRFATN---SNQPVAE 160

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 161 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|88604139|ref|YP_504317.1| signal transduction protein [Methanospirillum hungatei JF-1]
 gi|88189601|gb|ABD42598.1| putative signal transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 291

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 58/131 (44%), Gaps = 3/131 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H G  L  +    S +M +      +     L +A+ I+   R G + +VDE   L GI+
Sbjct: 80  HDGNFLAAINESVSKIMKTDVRT--LHPDATLNEALDIILRDRIGGIPIVDEYGVLNGIV 137

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           TE D+ +   +      VE VM ++  V   D  L+   +++ +H    L +V       
Sbjct: 138 TERDVLKILCRSHAATPVESVMTRSLLVQQPDCPLSTVTKVMTEHQFRRLPIV-KNDVLF 196

Query: 328 GIVHFLDLLRF 338
           GI+   D++R+
Sbjct: 197 GIITATDIVRY 207



 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLSVEDV 288
           +  CPL     +++E +F  + +V +   L GIIT  DI R          L T  V +V
Sbjct: 167 QPDCPLSTVTKVMTEHQFRRLPIV-KNDVLFGIITATDIVRYIGTGRVFEKLVTGDVAEV 225

Query: 289 MIK--------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M          N      D  +T A + +    +  L V+D   + +G+V   DL+R 
Sbjct: 226 MNIPVRDLLSGNLFTTDPDATVTDAARAMMAKKVGALPVIDQS-RLVGLVTEFDLVRA 282



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 52/122 (42%), Gaps = 17/122 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFR-----------NFHKDLN 281
                +  AI  L++  F  + +VD G  +LKGIIT  D+             N   D N
Sbjct: 24  PPTMRIFGAIETLTQWGFRRLPIVDPGTHRLKGIITARDVIDFLGGGELFNLINVKHDGN 83

Query: 282 TL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L     SV  +M  + + +  D  L  A+ ++ +  I  + +VD+     GIV   D+L
Sbjct: 84  FLAAINESVSKIMKTDVRTLHPDATLNEALDIILRDRIGGIPIVDEYGVLNGIVTERDVL 143

Query: 337 RF 338
           + 
Sbjct: 144 KI 145



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 1/42 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + DA   +  K+ G + V+D   +L G++TE D+ R F
Sbjct: 243 PDATVTDAARAMMAKKVGALPVID-QSRLVGLVTEFDLVRAF 283



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 23/61 (37%), Gaps = 1/61 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDL 335
           H D +  +V  +             +  A++ L Q     L +VD    +  GI+   D+
Sbjct: 4   HHDHDNRTVLSIATSKVISAPPTMRIFGAIETLTQWGFRRLPIVDPGTHRLKGIITARDV 63

Query: 336 L 336
           +
Sbjct: 64  I 64


>gi|134298994|ref|YP_001112490.1| polynucleotide adenylyltransferase region [Desulfotomaculum
           reducens MI-1]
 gi|134051694|gb|ABO49665.1| Polynucleotide adenylyltransferase region [Desulfotomaculum
           reducens MI-1]
          Length = 907

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +A  I+       + V+ +  KL G+I+  D+ +  H  L    V
Sbjct: 315 MSSPVKMVFPETTIEEAGKIMLRYGHTGLPVI-KDGKLSGVISRRDVEKATHHGLGHAPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  N   + +D  +     L+ + +I  L VV +    IGIV   D+L+
Sbjct: 374 KGYMTTNVITVQKDMNIHDVQDLMIEKDIGRLPVV-EGNMVIGIVSRTDVLQ 424



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+V+D+M    K++  +T +  A +++ ++  + L V+    K  G++   D+ + 
Sbjct: 309 LTVKDIMSSPVKMVFPETTIEEAGKIMLRYGHTGLPVI-KDGKLSGVISRRDVEKA 363


>gi|304384563|ref|ZP_07366909.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
 gi|304328757|gb|EFL95977.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
          Length = 270

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 3/146 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ IK    R+ + G+G SG+   +L+  L   G  +F    +   +    ++
Sbjct: 107 QTALDEAVQLIKNAP-RIFVFGLGSSGYNAQELSQRLLRMGINAFAPADSHTMYITSSIM 165

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             DDL+IVLS SG+S E+      A+   + +IAIT+ + S +A  +D  L    +    
Sbjct: 166 QSDDLVIVLSVSGNSAEVNEATKLAKEHQLKVIAITAFDDSPLATMSDCKLF--VQYSDF 223

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLE 195
                   S +  + + D L+  LL 
Sbjct: 224 VDNTRFINSQLGIVYVIDVLSTMLLH 249


>gi|297568231|ref|YP_003689575.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924146|gb|ADH84956.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 228

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     L+ A  I+ E     + VV    KL GI+T+ D+                +  L
Sbjct: 14  VDENTSLMRATRIMKENNIRRLPVV-SHGKLIGIVTDRDVKDASPSKTATLDIHELYYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + V+DVM  +P  +     L +A  ++ +  IS L VVD+  +  G++   DLLR 
Sbjct: 73  SEMKVKDVMTASPLTLKGKDSLELAAVIMLEDKISGLPVVDESGRLTGLLSETDLLRA 130



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +ED M KN   + E+T L  A ++++++NI  L VV    K IGIV   D
Sbjct: 3   IEDWMAKNVLTVDENTSLMRATRIMKENNIRRLPVV-SHGKLIGIVTDRD 51



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             L  A  I+ E +   + VVDE  +L G+++E D+ R F +
Sbjct: 92  DSLELAAVIMLEDKISGLPVVDESGRLTGLLSETDLLRAFVR 133


>gi|290581414|ref|YP_003485806.1| inosine monophosphate dehydrogenase [Streptococcus mutans NN2025]
 gi|254998313|dbj|BAH88914.1| inosine monophosphate dehydrogenase [Streptococcus mutans NN2025]
          Length = 493

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIKEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  + +KL GIIT  D+            + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPVVETLDNRKLIGIITNRDMRFISD---YETPIS 156

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M     V     T L  A ++L +H I  L ++D+  +  G++   D+
Sbjct: 157 EHMTSEKLVTAPVGTDLETAERILHEHRIEKLPLIDEKGRLSGLITIKDI 206


>gi|171185086|ref|YP_001794005.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934298|gb|ACB39559.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 144

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
             +  ++K    +++A+ ++++   G V +VD   +  G+I+E  + R     +      
Sbjct: 8   RKNPIVLKHDGTILEAVQLMAKHNVGVVPIVDAEGRPLGVISERHVLRALAAGVPLDRPA 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +   +    +  D  +  A+  +R+  +  ++VVD   + IG++   D +R  ++
Sbjct: 68  LEAARRELVTVTPDANVYDALLEMRRRGVRHVLVVDRDGRLIGVLSIRDFMREDVL 123


>gi|148508081|gb|ABQ75877.1| IMP dehydrogenase/ CBS domain protein [uncultured haloarchaeon]
          Length = 521

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF--------SENDFYVLHPGGKLGTLFVCASDVM 224
             P  SA M        AI +              +      +    +   L +   +V+
Sbjct: 75  NIPIVSAAMDTVTESGTAIGMAREGGLGVLHRNMDTPQMIAEIEQVKRADELVIRRENVV 134

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            +            + +   ++  +      VVD    + GII+  DI        +   
Sbjct: 135 TA-------SPTQTVREVDAMMEREGVSGAPVVDGDDTVLGIISGTDIRPYLEVGDSDA- 186

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M               A++L+  H I  + +VD   + +G++    +L+
Sbjct: 187 VSEAMTDEVVTASLTVDARDALELMYDHKIERVPLVDKSNRLVGLITMQGILQ 239


>gi|89898826|ref|YP_521297.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89343563|gb|ABD67766.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 142

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDV 288
            V     + +A+ +L+    G + V+ E  KL GI++E D  R      K+    +V D+
Sbjct: 17  QVSPSVTVFEALKLLANYGVGALTVM-ENGKLAGIVSERDYTRKVALMGKNSKETTVADI 75

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++   +  +T     M L+ Q  I  L V+D  +  +G++   DL+
Sbjct: 76  MTRDVITVTPNTGTHACMALMSQKKIRHLPVLDGAE-VVGLISIRDLM 122


>gi|47565619|ref|ZP_00236659.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
 gi|47557255|gb|EAL15583.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
          Length = 284

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 44/191 (23%), Positives = 75/191 (39%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++S V  A +   +    ++ L+ +L          AV+ ++    R
Sbjct: 80  HTPMQNIHEEVSAEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKVLQEAS-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G+++++ ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKG 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  AR     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEIARARGAKIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSLQR 264


>gi|229108424|ref|ZP_04238041.1| Transcriptional regulator, RpiR [Bacillus cereus Rock1-15]
 gi|228675051|gb|EEL30278.1| Transcriptional regulator, RpiR [Bacillus cereus Rock1-15]
          Length = 287

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I+L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 ILLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|312136466|ref|YP_004003803.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224185|gb|ADP77041.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 312

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 8/121 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    +     + DA+  + +   G + VVD   ++ GI++E D        +N   V
Sbjct: 114 MTEDAHYITNKDSIKDAVEKMLKHDVGALPVVDNENRVVGIVSERDFVFLMAGLINEEPV 173

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--------DCQKAIGIVHFLDLLR 337
            D M +NP      T +    +++ ++ +  + +V         + +K IGIV   D+L+
Sbjct: 174 ADYMTENPITTTPGTPIESVSKIMVRNGVRRVPIVGEKRKTPKPESEKLIGIVTSTDILK 233

Query: 338 F 338
           F
Sbjct: 234 F 234



 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/137 (21%), Positives = 56/137 (40%), Gaps = 18/137 (13%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           +  +   +  V  G  + +A  I+ + +   + VV    +L GIIT  DI          
Sbjct: 32  MSIANKDVITVPPGISVKEASEIMVKNKVRRLPVVSPKNELLGIITATDIVDFLGGGEKF 91

Query: 282 ---------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                            S++D+M ++   I     +  A++ + +H++  L VVD+  + 
Sbjct: 92  KIIENKYNDNFLAAVNDSIKDIMTEDAHYITNKDSIKDAVEKMLKHDVGALPVVDNENRV 151

Query: 327 IGIVHFLD--LLRFGII 341
           +GIV   D   L  G+I
Sbjct: 152 VGIVSERDFVFLMAGLI 168



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 54/134 (40%), Gaps = 22/134 (16%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGIITEGDIFRNF 276
           +  ++      G P+     I+       V +V E         +KL GI+T  DI +  
Sbjct: 176 YMTENPITTTPGTPIESVSKIMVRNGVRRVPIVGEKRKTPKPESEKLIGIVTSTDILKFL 235

Query: 277 HK-------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                          ++ +  V ++M K+   +     L    +L+ ++N+  L VV+D 
Sbjct: 236 GNSKAFDSLTSASAFEVLSRPVSEIMQKDVIKVSITDNLGKVYELMDKNNVGGLPVVEDD 295

Query: 324 QKAIGIVHFLDLLR 337
           Q  +GI+   DLLR
Sbjct: 296 Q-LLGIITERDLLR 308



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 32/78 (41%), Gaps = 13/78 (16%)

Query: 272 IFRNFHKDLNTLSVE----------DVMI---KNPKVILEDTLLTVAMQLLRQHNISVLM 318
           I  N  K L+   VE          D+M    K+   +     +  A +++ ++ +  L 
Sbjct: 5   ILENIGKSLDRGPVEFDTRLSDKEGDIMSIANKDVITVPPGISVKEASEIMVKNKVRRLP 64

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VV    + +GI+   D++
Sbjct: 65  VVSPKNELLGIITATDIV 82


>gi|270291609|ref|ZP_06197829.1| RpiR family transcriptional regulator [Pediococcus acidilactici
           7_4]
 gi|270279928|gb|EFA25766.1| RpiR family transcriptional regulator [Pediococcus acidilactici
           7_4]
          Length = 270

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 3/146 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ IK    R+ + G+G SG+   +L+  L   G  +F    +   +    ++
Sbjct: 107 QTALDEAVQLIKNAP-RIFVFGLGSSGYNAQELSQRLLRMGINAFAPADSHTMYITSSIM 165

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             DDL+IVLS SG+S E+      A+   + +IAIT+ + S +A  +D  L    +    
Sbjct: 166 QSDDLVIVLSVSGNSAEVNEATKLAKEHQLKVIAITAFDDSPLATMSDCKLF--VQYSDF 223

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLE 195
                   S +  + + D L+  LL 
Sbjct: 224 VDNTRFINSQLGIVYVIDVLSTMLLH 249


>gi|24380485|ref|NP_722440.1| inosine 5'-monophosphate dehydrogenase [Streptococcus mutans UA159]
 gi|24378516|gb|AAN59746.1|AE015036_5 inosine monophosphate dehydrogenase [Streptococcus mutans UA159]
          Length = 493

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIKEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  + +KL GIIT  D+            + 
Sbjct: 100 DPFFLTPEHKVSEAEELMQRYRISGVPVVETLDNRKLIGIITNRDMRFISD---YETPIS 156

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M     V     T L  A ++L +H I  L ++D+  +  G++   D+
Sbjct: 157 EHMTSEKLVTAPVGTDLETAERILHEHRIEKLPLIDEKGRLSGLITIKDI 206


>gi|213861668|ref|ZP_03386138.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
          Length = 82

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 38/82 (46%), Gaps = 1/82 (1%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           +AV D  Q+++G+ T+GD+ R        T  V + M      +   +    A ++L + 
Sbjct: 1   MAVCDAQQQVQGVFTDGDLRRWLVGGSALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKR 60

Query: 313 NISVLMVVDDCQKAIGIVHFLD 334
            I+   VVD+  K  G ++  D
Sbjct: 61  KITAAPVVDENGKLTGAINLQD 82


>gi|21225805|ref|NP_631584.1| hypothetical protein SCO7540 [Streptomyces coelicolor A3(2)]
 gi|7799276|emb|CAB90898.1| conserved hypothetical protein [Streptomyces coelicolor A3(2)]
          Length = 223

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
             D++  V+ G P  +   +L E     V VVDE  +  G+++E D+             
Sbjct: 10  MSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGGEPDGSA 69

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 R      +      +M   P   LE   +  A +++ +H I  L+VVD   +  
Sbjct: 70  EHAEWSRASAGKADATDAAGLMTSPPLCALESWSVVDAARVMARHRIKRLLVVDGDGRLA 129

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 130 GVVSRSDLLR 139



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V D+M      +   T       LL +++I+ + VVD+  + +G+V   DLL+ 
Sbjct: 1   MKHQRVRDLMSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQK 59



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 23/41 (56%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ++DA  +++  R   + VVD   +L G+++  D+ R F +
Sbjct: 103 SVVDAARVMARHRIKRLLVVDGDGRLAGVVSRSDLLRVFLR 143


>gi|326333121|ref|ZP_08199370.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
 gi|325949104|gb|EGD41195.1| inosine-5'-monophosphate dehydrogenase [Nocardioidaceae bacterium
           Broad-1]
          Length = 499

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 63/183 (34%), Gaps = 10/183 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           +          +   P  SA M       +AIA+            VLH    +      
Sbjct: 31  IDTTSRLTREINLRVPLISAAMDTVTESRMAIAMARQGGIG-----VLHRNLSIEDQAYQ 85

Query: 220 ASDVMHSGD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  +      +   +     L     +  E R     VVD  QKL GIIT  D+   
Sbjct: 86  VDLVKRTQTGIISNPVTIGPDATLEQLDKLAGEYRISGFPVVDVDQKLIGIITNRDLRFT 145

Query: 276 FHKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  T  V +VM  K+      +     A +LLRQH +  L +VD   +  G++   D
Sbjct: 146 PVAEWATTKVNEVMTSKDLITGPAEISREEATKLLRQHKLERLPLVDTDGRITGLITVKD 205

Query: 335 LLR 337
            ++
Sbjct: 206 FVK 208


>gi|237802392|ref|ZP_04590853.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
 gi|331025249|gb|EGI05305.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. oryzae str. 1_6]
          Length = 644

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---T 282
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+      D+N   +
Sbjct: 183 AMRHPVICNPDTPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVA-DVNVDFS 241

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V   M  +P  +  D     A   + + +I+ + +V    +  G+V   DL
Sbjct: 242 APVSHSMSPSPFHLSPDASAFDAAIAMTERHIAHVCLV-KDGRLCGVVSERDL 293



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + D+ +++P +   DT +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGDLAMRHPVICNPDTPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|282165568|ref|YP_003357953.1| putative transcriptional regulator [Methanocella paludicola SANAE]
 gi|282157882|dbj|BAI62970.1| putative transcriptional regulator [Methanocella paludicola SANAE]
          Length = 291

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              +  +  G  + DA+ +L++       V ++   + G++T  DI R    D     V 
Sbjct: 178 NHRLITIPSGATVKDALVVLAKHDIHGAPV-EKDGSIVGMVTYTDIGRAISSDKTDDKVT 236

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++M  N   I ++  +  A+ ++ Q+ I  L+V     K  G++  +D++
Sbjct: 237 EIMTPNVISIDQEKPMYEAVSVMNQNKIGRLLVT-GEGKPKGMITRMDVI 285



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V D +      I     +  A+ +L +H+I    V +     +G+V + D+ R 
Sbjct: 168 LPKKPVRDYINHRLITIPSGATVKDALVVLAKHDIHGAPV-EKDGSIVGMVTYTDIGRA 225


>gi|194397714|ref|YP_002038824.1| inosine 5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           G54]
 gi|194357381|gb|ACF55829.1| inosine-5'-monophosphate dehydrogenase [Streptococcus pneumoniae
           G54]
          Length = 492

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTESQMAIAIARAGGLG-----VIHKNMSIAQQADXVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V VV+  E +KL GI+T   +   F  D N   + 
Sbjct: 100 DPFFLTPEHTIAEADELMGRYRISGVPVVETLENRKLVGILTNRXLR--FISDYNQ-PIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +N       T L  A  +L++H I  L +VD+     G++   D+
Sbjct: 157 NHMTSENLVTAPVGTDLATAESILQEHRIEKLPLVDEEGSLSGLITIKDI 206


>gi|117618999|ref|YP_856520.1| inosine-5'-monophosphate dehydrogenase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560406|gb|ABK37354.1| inosine-5'-monophosphate dehydrogenase [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 487

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKYESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    +     +  +  F    VV EG +L GIIT  D+         + +VE +M 
Sbjct: 98  VTVRPDMTIAQIKELSHKNGFAGYPVVTEGNQLVGIITGRDVRFVID---LSQTVEQIMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      + E       + L+++H I  ++VV+   K  G++   D  + 
Sbjct: 155 QKDRLVTVREGAPREEVVGLMQKHRIEKVLVVNADFKLKGMITVKDFQKA 204


>gi|110668305|ref|YP_658116.1| IMP dehydrogenase 1 [Haloquadratum walsbyi DSM 16790]
 gi|109626052|emb|CAJ52502.1| IMP dehydrogenase/ CBS domain protein [Haloquadratum walsbyi DSM
           16790]
          Length = 499

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 16/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF--------SENDFYVLHPGGKLGTLFVCASDVM 224
             P  SA M        AI +              +      +    +   L +   +V+
Sbjct: 53  NIPIVSAAMDTVTESGTAIGMAREGGLGVLHRNMDTPQMIAEIEQVKRADELVIRRENVV 112

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            +            + +   ++  +      VVD    + GII+  DI        +   
Sbjct: 113 TA-------SPTQTVREVDAMMEREGVSGAPVVDGDDTVLGIISGTDIRPYLEVGDSDA- 164

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M               A++L+  H I  + +VD   + +G++    +L+
Sbjct: 165 VSEAMTDEVVTASLTVDARDALELMYDHKIERVPLVDKSNRLVGLITMQGILQ 217


>gi|254229465|ref|ZP_04922880.1| Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits [Vibrio sp. Ex25]
 gi|262392572|ref|YP_003284426.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           sp. Ex25]
 gi|151938036|gb|EDN56879.1| Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits [Vibrio sp. Ex25]
 gi|262336166|gb|ACY49961.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           sp. Ex25]
          Length = 352

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 2/115 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NT 282
           M       L+K    L+DA+ I++ +    V VVD+   L G++T+GDI R   K+L  T
Sbjct: 1   MSHCWKNVLIKPTSSLLDALEIINNEALRVVLVVDDNDHLLGVVTDGDIRRGLLKNLPLT 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  VM  NP     +T     +  +   ++  + ++    K +G+      LR
Sbjct: 61  ADVAQVMNTNPLTANINTPREELISAMESRSVLSIPLI-KNGKVVGLETLHGALR 114



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I   + L  A++++    + V++VVDD    +G+V   D+ R G++
Sbjct: 10  IKPTSSLLDALEIINNEALRVVLVVDDNDHLLGVVTDGDI-RRGLL 54


>gi|269120744|ref|YP_003308921.1| RpiR family transcriptional regulator [Sebaldella termitidis ATCC
           33386]
 gi|268614622|gb|ACZ08990.1| transcriptional regulator, RpiR family [Sebaldella termitidis ATCC
           33386]
          Length = 284

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 78/184 (42%), Gaps = 9/184 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A  +     + +  ++ +L+    + F   +E I A + R+V+ GIG S  + +   +
Sbjct: 95  DIATTNTKIANQYIDVIKLTLELNPVYVFEEVIEAIIAAE-RIVVLGIGNSAIVSTDFVN 153

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            LA  G  +F           +  + ++DL+I++S SG + E+      A++    +I+I
Sbjct: 154 KLARVGMNAFTNLDTHLQFSMISNLGKNDLLILISDSGETREIIEAAKLAKQNKTRIISI 213

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T   K+ +  ++D +L            L  TTS I Q  I D + I      N  + DF
Sbjct: 214 TKFTKNKLHAYSDFILKT--ASFDINLRLDATTSRITQFTIIDMIFI------NILKTDF 265

Query: 205 YVLH 208
               
Sbjct: 266 SKYK 269


>gi|116753656|ref|YP_842774.1| signal-transduction protein [Methanosaeta thermophila PT]
 gi|116665107|gb|ABK14134.1| putative signal-transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 120

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 7/111 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFR---NFHKDLNTLSVED 287
           V     +IDAI +++    GCV V + G  ++++GI+T   IF+       D   +SV D
Sbjct: 8   VPPNAKVIDAIKLMASGPKGCVIVAEGGLLKEVEGIVTTSRIFKKVFAAGLDPANVSVAD 67

Query: 288 VMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M   P   I  +     A +L+ +HNI  L VV      +GI+   DLL+
Sbjct: 68  IMTPAPLVTISPEATTREAAELMVRHNIRRLPVV-KDGVLVGIITSKDLLQ 117



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 19/52 (36%), Gaps = 1/52 (1%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             + +   +  +       +A  ++       + VV +   L GIIT  D+ 
Sbjct: 66  ADIMTPAPLVTISPEATTREAAELMVRHNIRRLPVV-KDGVLVGIITSKDLL 116


>gi|299769864|ref|YP_003731890.1| CBS domain pair family protein [Acinetobacter sp. DR1]
 gi|298699952|gb|ADI90517.1| CBS domain pair family protein [Acinetobacter sp. DR1]
          Length = 143

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV EG+K+ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAIKIMADKGIGAL-VVAEGEKVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TSKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNE-KLVGFISIGDLVKA 125



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A++++    I  L VV + +K +GI+   D  R 
Sbjct: 18  TISPEATVLEAIKIMADKGIGAL-VVAEGEKVVGILSERDYTRK 60



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+       +  +     +++M S      V +   + + + +++++    + V+D
Sbjct: 52  LSERDYTRKVTLMERSSYSTTVAEIMTSKVLT--VSLNNTVEECLQLMTDRHLRHLPVLD 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
             +KL G I+ GD+ +   +D   L
Sbjct: 110 -NEKLVGFISIGDLVKAAMEDQKNL 133


>gi|229155853|ref|ZP_04283954.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|228627460|gb|EEK84186.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 4342]
          Length = 202

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 6/179 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++S V  A +   +    ++ L+ +L          AV+ ++    R+   G G SG I
Sbjct: 10  VEDSMVTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKVLQEAS-RIEFYGNGGSGII 65

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                     TG        +       G+++++ ++I +S SGS+  L   L  AR   
Sbjct: 66  AMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKGLLEALEIARARG 125

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +IAITS  KS ++  ADI L             +  +S + QL++ D L + L   R
Sbjct: 126 AKIIAITSYQKSALSQLADITLYTSIRETDFRTEAS--SSRLAQLSLLDTLYVGLSLQR 182


>gi|170725935|ref|YP_001759961.1| nucleotidyl transferase [Shewanella woodyi ATCC 51908]
 gi|169811282|gb|ACA85866.1| Nucleotidyl transferase [Shewanella woodyi ATCC 51908]
          Length = 352

 Score = 87.3 bits (215), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 2/102 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     L DA+ +++ +      V+D  Q L G+IT+GDI R    +L+    V  VM  
Sbjct: 10  ISPDKTLRDALELINSQALQVALVIDHNQHLLGVITDGDIRRGLLNNLSLDAIVTQVMNT 69

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           NP+     T     +QL++QH+I  + +V      +G+    
Sbjct: 70  NPRTAAPSTSKKKLLQLMQQHSILSIPLV-KDNILVGLETLK 110



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             I  D  L  A++L+    + V +V+D  Q  +G++   D+ R G++
Sbjct: 8   VTISPDKTLRDALELINSQALQVALVIDHNQHLLGVITDGDI-RRGLL 54


>gi|328768526|gb|EGF78572.1| hypothetical protein BATDEDRAFT_12894 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 331

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 3/93 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMI 290
                ++ A + ++ KR   V VVD   +L GI+T+ D+  R     LN  T  +  VM 
Sbjct: 25  NENVNVLQAASYMAAKRQDAVLVVDNDGELTGILTDKDLAYRVIASRLNPKTTPIVAVMT 84

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           KNP  +  DT  + A+  +   +   L VVDD 
Sbjct: 85  KNPVSVGPDTTASDALNKMVAGHFRHLPVVDDG 117



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 20/95 (21%), Positives = 38/95 (40%), Gaps = 11/95 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV--------VDEGQKLKGIITEGDI-FRNF 276
           +  S P++   C ++DA+  + +     V          +     L GI T  D+  R  
Sbjct: 236 APSSTPMLSKNCSVLDAVVKMQQTHETAVLAFEPLPNQPMVASSLLAGIFTTKDLVLRVL 295

Query: 277 HKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLL 309
              LN    ++  VM  +P  +  DT +  A++ +
Sbjct: 296 AAGLNPEKTAISRVMTPHPDCVGLDTTVIDALRKM 330


>gi|312864141|ref|ZP_07724376.1| inosine-5'-monophosphate dehydrogenase [Streptococcus vestibularis
           F0396]
 gi|311100373|gb|EFQ58581.1| inosine-5'-monophosphate dehydrogenase [Streptococcus vestibularis
           F0396]
          Length = 493

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 71/197 (36%), Gaps = 28/197 (14%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLKTKLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++   R   V +V+  E
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPEHKVAEAEELMQRYRISGVPIVETLE 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
            +KL GIIT  D+    + D     + + M     V     T L  A  +L +H I  L 
Sbjct: 133 NRKLVGIITNRDMRFISNYD---TKISEHMTSEKLVTAPVGTDLETAESILHEHRIEKLP 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           +VD+  +  G++   D+
Sbjct: 190 LVDEEGRLSGLITIKDI 206


>gi|307353747|ref|YP_003894798.1| hypothetical protein Mpet_1603 [Methanoplanus petrolearius DSM
           11571]
 gi|307156980|gb|ADN36360.1| protein of unknown function DUF39 [Methanoplanus petrolearius DSM
           11571]
          Length = 502

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 54/136 (39%), Gaps = 2/136 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
             +D        K         ++M    +   +     +  A   L       + V+++
Sbjct: 359 RPSDASRTVKPMKESKRTPRVMEIMERNITC--ISEDADIKTAAKKLLRGETNHLPVLNK 416

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             K+ GI+T  D+ +   K+    SV  VM ++      +  + +A   L ++NIS L V
Sbjct: 417 ENKVVGIVTTYDVSKAIIKENVNDSVSMVMSRSVITTTPEEAVDIAAMKLERNNISALPV 476

Query: 320 VDDCQKAIGIVHFLDL 335
           +D   K +GI+   DL
Sbjct: 477 IDPEGKLLGILTGTDL 492



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +   T  V ++M +N   I ED  +  A + L +   + L V++   K +GIV   D+
Sbjct: 370 MKESKRTPRVMEIMERNITCISEDADIKTAAKKLLRGETNHLPVLNKENKVVGIVTTYDV 429

Query: 336 LRF 338
            + 
Sbjct: 430 SKA 432


>gi|50550993|ref|XP_502970.1| YALI0D18106p [Yarrowia lipolytica]
 gi|49648838|emb|CAG81162.1| YALI0D18106p [Yarrowia lipolytica]
          Length = 593

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
                  +K    + +A  ++S KR  CV V+++   + GI T  D+         D + 
Sbjct: 70  KPSPAVTIKPKTSVSEAAQLMSAKRENCVLVIEDDN-ISGIFTAKDLAFKVVGSGLDASV 128

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +V+ +M +NP     +T  T  + L+       L V+D+  +  GI+  
Sbjct: 129 TTVDQIMTRNPLYATTNTSATEGLNLMVNKGFRHLPVMDENNEVSGILDI 178



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 7/113 (6%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSV 285
               V +   + +A +++ +     V V D   ++KGI T  D+  R     L+    SV
Sbjct: 242 PPTYVDVRTTVFEAASLMKQNHTTAVLVTDHD-QVKGIFTSKDVVLRVIAAGLDPKNCSV 300

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VM  +P V  ++  + VA++ + +     L V+    + +G+V   D+L+ 
Sbjct: 301 IRVMTPHPDVAPQNMSIQVALRTMHEGRYLNLPVMGPNAELVGVV---DVLKL 350


>gi|228963921|ref|ZP_04125056.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228795772|gb|EEM43245.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 274

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 96  AAIEASVTAIDKKELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 154

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 155 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 214

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 215 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 253


>gi|167589794|ref|ZP_02382182.1| putative signal-transduction protein with CBS domains [Burkholderia
           ubonensis Bu]
          Length = 153

 Score = 87.3 bits (215), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG ++  V+    + DAI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTVYTVRKTDLVYDAIKLMAEKGIGALLVMD-GDDISGIVTERDYARKIVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG++   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLDD-GKLIGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 36/80 (45%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M S   +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYARKIVLQDRSSKATRVEEIMTSK--VRYVEPSQSSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+I+ GD+ ++   D
Sbjct: 114 -GKLIGLISIGDLVKSVIAD 132


>gi|84495172|ref|ZP_00994291.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
 gi|84384665|gb|EAQ00545.1| putative transcriptional regulator [Janibacter sp. HTCC2649]
          Length = 294

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 57/175 (32%), Positives = 79/175 (45%), Gaps = 6/175 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHC-AVEKI---KAIKGRVVITGIGKSGHIGSK 81
            A  +I      ++SL+SS   E + Q    A++K     A   RV I GIG S  +GS 
Sbjct: 100 SATDTIDDIIAKVASLDSSAVEETAQQLDRQALKKAADGLAGATRVDIYGIGASAIVGSD 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
           L   L   G  SF  +    +     ++T+ D+ I +S SG++ E    L  AR      
Sbjct: 160 LQQKLHRIGVVSFAWNDPHIALTSATLLTKKDVAIGISHSGATSETIESLAAARERGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IAIT+   S +A  ADIVLT      S   G   T S I  L + D L IA+ + 
Sbjct: 220 IAITNFPLSPLAKGADIVLTTAARETSLRSGA--TASRIAALTVVDCLFIAVAQR 272


>gi|172063607|ref|YP_001811258.1| signal-transduction protein [Burkholderia ambifaria MC40-6]
 gi|171996124|gb|ACB67042.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MC40-6]
          Length = 153

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQERSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVK 127



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+                         +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYA--RKVVLQERSSKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLIGLISIGDLVKSVIAD 132


>gi|126699852|ref|YP_001088749.1| transcriptional regulator [Clostridium difficile 630]
 gi|254975827|ref|ZP_05272299.1| transcriptional regulator [Clostridium difficile QCD-66c26]
 gi|255093213|ref|ZP_05322691.1| transcriptional regulator [Clostridium difficile CIP 107932]
 gi|255101378|ref|ZP_05330355.1| transcriptional regulator [Clostridium difficile QCD-63q42]
 gi|255307252|ref|ZP_05351423.1| transcriptional regulator [Clostridium difficile ATCC 43255]
 gi|255314956|ref|ZP_05356539.1| transcriptional regulator [Clostridium difficile QCD-76w55]
 gi|255517631|ref|ZP_05385307.1| transcriptional regulator [Clostridium difficile QCD-97b34]
 gi|255650741|ref|ZP_05397643.1| transcriptional regulator [Clostridium difficile QCD-37x79]
 gi|255656217|ref|ZP_05401626.1| transcriptional regulator [Clostridium difficile QCD-23m63]
 gi|260683827|ref|YP_003215112.1| RpiR family transcriptional regulator [Clostridium difficile CD196]
 gi|260687487|ref|YP_003218621.1| RpiR family transcriptional regulator [Clostridium difficile
           R20291]
 gi|296450347|ref|ZP_06892106.1| RpiR family transcriptional regulator [Clostridium difficile NAP08]
 gi|296878759|ref|ZP_06902762.1| RpiR family transcriptional regulator [Clostridium difficile NAP07]
 gi|115251289|emb|CAJ69120.1| Transcriptional regulator, RpiR family [Clostridium difficile]
 gi|260209990|emb|CBA64010.1| RpiR-family transcriptional regulator [Clostridium difficile CD196]
 gi|260213504|emb|CBE05216.1| RpiR-family transcriptional regulator [Clostridium difficile
           R20291]
 gi|296260840|gb|EFH07676.1| RpiR family transcriptional regulator [Clostridium difficile NAP08]
 gi|296430266|gb|EFH16110.1| RpiR family transcriptional regulator [Clostridium difficile NAP07]
          Length = 282

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 67/167 (40%), Gaps = 6/167 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A + + +    +++LE++++   S   H     I   K +V   GIG SG I    
Sbjct: 93  ALDTAKKLLSS---NVTTLENTVEIINSKDVHDCARLIINAK-KVYFIGIGYSGIIAQDS 148

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
                  G       ++        ++   DLII +S SG ++E+   +  AR  +  +I
Sbjct: 149 NYKFMRIGLNCVSFDSSHTMIMMSSIMEEGDLIIAISHSGETEEIIKTVKLARANNAKII 208

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +IT    S +   +D+ L+          G    +S + Q  I D +
Sbjct: 209 SITENKNSELKDISDVHLSYVSGETVLETGSI--SSKLAQFFIIDLV 253


>gi|58040690|ref|YP_192654.1| inosine-5'-monophosphate dehydrogenase [Gluconobacter oxydans 621H]
 gi|58003104|gb|AAW61998.1| Inosine-5'-monophosphate dehydrogenase [Gluconobacter oxydans 621H]
          Length = 497

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIA+ +          V+H    +         V      + +
Sbjct: 50  NIPLMSSAMDTVTEDGMAIAMAQQGG-----MGVIHKNLSIEEQAEQVRRVKRFESGMVV 104

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     L +   I++      + V+ D    L GI+T  D+      +     V D
Sbjct: 105 NPVTVGPDQTLAEVQAIMARHGVSGLPVIEDGSGVLVGILTNRDMRFTTDPN---TRVRD 161

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M   N   +L       A  LL +H I  L+VVD+ ++ IG++   D+ + 
Sbjct: 162 LMTHENLVTVLNGAAPDEARTLLHRHRIEKLLVVDEAKRCIGLITVKDMDKA 213


>gi|322515802|ref|ZP_08068747.1| inosine-5'-monophosphate dehydrogenase [Streptococcus vestibularis
           ATCC 49124]
 gi|322125764|gb|EFX97082.1| inosine-5'-monophosphate dehydrogenase [Streptococcus vestibularis
           ATCC 49124]
          Length = 493

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AI++  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAISIARAGGLG-----VIHKNMSIAEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+    + D     + 
Sbjct: 100 DPFFLTPEHKVAEAEELMQRYRISGVPIVETLENRKLVGIITNRDMRFISNYD---TKIS 156

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M     V     T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 157 EHMTSEKLVTAPVGTDLETAESILHEHRIEKLPLVDEEGRLSGLITIKDI 206


>gi|237755790|ref|ZP_04584392.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
           yellowstonense SS-5]
 gi|237692053|gb|EEP61059.1| cyclic nucleotide binding protein [Sulfurihydrogenibium
           yellowstonense SS-5]
          Length = 600

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/112 (32%), Positives = 56/112 (50%), Gaps = 6/112 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLS-- 284
               +V     + DA+  ++EK  G  +V VD      GIIT+ DI +       + S  
Sbjct: 147 QQPVIVSKDTTIYDAVKEMTEK--GAYSVIVDFRNGEYGIITDSDIRKKVILQNISASEN 204

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VE +  K    I  D+ L  A+ L+ +HNI   +VV++  K IGI++ +DLL
Sbjct: 205 VEKIATKGLITINADSFLFDAIFLMIKHNIKR-VVVEENGKIIGILNEVDLL 255


>gi|194366828|ref|YP_002029438.1| putative signal transduction protein [Stenotrophomonas maltophilia
           R551-3]
 gi|194349632|gb|ACF52755.1| putative signal-transduction protein with CBS domains
           [Stenotrophomonas maltophilia R551-3]
          Length = 143

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  V     +IDAI +++EK  G V V+D G +L GI++E D  R      +    
Sbjct: 11  KSPEVHAVAPDAAVIDAIRLMAEKGIGAVLVMD-GPRLVGILSERDYARKIVLRDRSSRD 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V ++M      +     +   +QL+  + I  L VV+  Q  +G++   DL++
Sbjct: 70  TAVAEIMTAQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQ-VLGVISIGDLVK 123


>gi|186475859|ref|YP_001857329.1| signal-transduction protein [Burkholderia phymatum STM815]
 gi|184192318|gb|ACC70283.1| putative signal-transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 230

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 26/130 (20%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----------FRNFHKDL-- 280
                + +A   L+EK    + VVD+  +L G++TEGD+            R +  D   
Sbjct: 15  HPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLLHRAEIGTGVNKRAWWLDFLA 74

Query: 281 ------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                       ++  V D+M  +   + EDT ++   +LL +H I  + VV    K  G
Sbjct: 75  STRELASEYIKEHSHKVSDLMTTDVITVTEDTPVSDIAELLERHRIKRVPVV-KDGKVTG 133

Query: 329 IVHFLDLLRF 338
           +V   +L+R 
Sbjct: 134 LVSRANLIRA 143



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 27/50 (54%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DVM  +      DT +  A + L + +IS + VVDD  + +G+V   DLL
Sbjct: 5   DVMTTSVVFAHPDTTVQEAARALAEKHISGMPVVDDKGELVGMVTEGDLL 54


>gi|301156026|emb|CBW15497.1| IMP dehydrogenase [Haemophilus parainfluenzae T3T1]
          Length = 487

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 68/171 (39%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     L  A+  + +K  F    VVD    L GIIT  D    F KDL+  +V  +M
Sbjct: 98  VTVSPDLTLA-ALAEMVKKNGFAGYPVVDAENNLIGIITGRDTR--FVKDLSK-TVSQLM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K  +   + E       ++L+ Q+ +  ++VVDD  K  G++   D  + 
Sbjct: 154 TKKEDLVTVKEGASRETILELMHQNRVEKVLVVDDAFKLKGMITVKDFQKA 204



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 28/60 (46%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S +M   + +  VK G      + ++ + R   V VVD+  KLKG+IT  D  +   K
Sbjct: 148 TVSQLMTKKEDLVTVKEGASRETILELMHQNRVEKVLVVDDAFKLKGMITVKDFQKAEQK 207


>gi|52078661|ref|YP_077452.1| transcriptional regulator YbbH [Bacillus licheniformis ATCC 14580]
 gi|52784023|ref|YP_089852.1| YbbH [Bacillus licheniformis ATCC 14580]
 gi|52001872|gb|AAU21814.1| probable transcriptional regulator YbbH [Bacillus licheniformis
           ATCC 14580]
 gi|52346525|gb|AAU39159.1| YbbH [Bacillus licheniformis ATCC 14580]
          Length = 282

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/197 (16%), Positives = 68/197 (34%), Gaps = 4/197 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       K   +    +     +   ++        + ++  + +     +   A++ +
Sbjct: 70  MRVAGDLMKPSDQGYRDIEPQEPLHSIVQ--KTTSNSIQAIRDTFENIDHEELQKAIQIL 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  V   GIG SG +              +            +     +D++  +S 
Sbjct: 128 INAET-VHFCGIGASGIVAQDAQQKFLRINKKATAFSDMHLVATLIANAGENDVLFAISH 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + E+   +  A++  I  I +T   +S VA  +DI L         P   A T+S +
Sbjct: 187 SGETQEIANAVRLAKKHGIKTIGLTRLGQSAVASLSDIALYTS-CSNEAPFRSAATSSRL 245

Query: 181 MQLAIGDALAIALLESR 197
            QL + D L + +   R
Sbjct: 246 TQLYMIDLLFLGMAAER 262


>gi|316935767|ref|YP_004110749.1| putative signal transduction protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603481|gb|ADU46016.1| putative signal transduction protein with CBS domains
           [Rhodopseudomonas palustris DX-1]
          Length = 243

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 27/140 (19%)

Query: 225 HSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-- 280
           H   +  +V       ++DA   + +     + VVD+  KL GII+EGD  R        
Sbjct: 4   HQIMTRQVVTIGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIRRAEIGTER 63

Query: 281 ----------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                 +   V +VM ++P  + E+T +   ++L+ +H++    
Sbjct: 64  KRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTRHPYTVTEETSIETIVKLMEKHHVKRFP 123

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+      +GIV   +LLR 
Sbjct: 124 VM-RGDLLVGIVTRKNLLRA 142



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    I  +  +  A   +  ++IS L VVDD  K IGI+   D +R
Sbjct: 1   MRAHQIMTRQVVTIGPEASIVDAANAMIDNHISGLPVVDDDGKLIGIISEGDFIR 55


>gi|254380672|ref|ZP_04996038.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194339583|gb|EDX20549.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 218

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 46/139 (33%), Gaps = 17/139 (12%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
                        +  V    P  +    L+E +   V VVD      G+I+E D+    
Sbjct: 1   MKHREVRELMTREVVTVLGNTPFKEIARTLTEHKVSAVPVVDHSGHPLGVISERDLLPKS 60

Query: 274 -------RNF-------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                  R+                 E++M   P     D  +  A +L+    +  L+V
Sbjct: 61  ADQSDYYRSLPEREAWQEAKATGTRAEELMSSPPVCARPDWTVAEAARLMEAQGVKRLLV 120

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VD+     GIV   DLLR 
Sbjct: 121 VDEADVLTGIVSRRDLLRI 139



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 35/89 (39%), Gaps = 3/89 (3%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEG 260
           D+Y   P  +                S P V  +    + +A  ++  +    + VVDE 
Sbjct: 65  DYYRSLPEREAWQEAKATGTRAEELMSSPPVCARPDWTVAEAARLMEAQGVKRLLVVDEA 124

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             L GI++  D+ R F +D   +   ++M
Sbjct: 125 DVLTGIVSRRDLLRIFLRDDEDIR-HEIM 152


>gi|160941729|ref|ZP_02089056.1| hypothetical protein CLOBOL_06625 [Clostridium bolteae ATCC
           BAA-613]
 gi|158435226|gb|EDP12993.1| hypothetical protein CLOBOL_06625 [Clostridium bolteae ATCC
           BAA-613]
          Length = 484

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDRVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFFLSPEHTLKDANDLMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFDR-PIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  KN     E   L  A  +L +  +  L +VDD     G++   D+
Sbjct: 152 MTTKNLVTAREGVTLKEAKAILAKARVEKLPIVDDDFNLKGLITIKDI 199


>gi|154247052|ref|YP_001418010.1| inosine-5'-monophosphate dehydrogenase [Xanthobacter autotrophicus
           Py2]
 gi|154161137|gb|ABS68353.1| inosine-5'-monophosphate dehydrogenase [Xanthobacter autotrophicus
           Py2]
          Length = 510

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 67/173 (38%), Gaps = 11/173 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 57  NLPIISAAMDTVTESRLAIAMAQAGGIGVIH-RNLTPELQAEHVRQVKKYESGMVVNPVT 115

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L  A+T++       + VV+ G      +L GI+T  D+    +       V +
Sbjct: 116 IHPDETLAHALTLMKRYGISGIPVVERGVGAIAGRLVGILTNRDVRFAHNP---EQRVAE 172

Query: 288 VMIKN-PKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K+    + E  +    A  LL Q+ I  L+VVD+ ++ +G++   D+ + 
Sbjct: 173 LMTKDRLITVREGQVNQEEAKSLLHQYRIEKLLVVDNDERCVGLITVKDIEKA 225


>gi|293607877|ref|ZP_06690180.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292828450|gb|EFF86812.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325122478|gb|ADY82001.1| CBS domain protein [Acinetobacter calcoaceticus PHEA-2]
          Length = 143

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV EG+K+ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAIKIMADKGIGAL-VVAEGEKVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TSKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNE-KLVGFISIGDLVKA 125



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A++++    I  L VV + +K +GI+   D  R 
Sbjct: 18  TISPEATVLEAIKIMADKGIGAL-VVAEGEKVVGILSERDYTRK 60



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+       +  +     +++M S      V +   + + + +++++    + V+D
Sbjct: 52  LSERDYTRKVTLMERSSYSTTVAEIMTSKVLT--VSLNNTVEECLQLMTDRHLRHLPVLD 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
             +KL G I+ GD+ +   +D   L
Sbjct: 110 -NEKLVGFISIGDLVKAAMEDQKNL 133


>gi|118484915|gb|ABK94323.1| unknown [Populus trichocarpa]
          Length = 541

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + +A   ++ +R   + + D    L GI+T+ D+         +L    V  VM
Sbjct: 63  VPESTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVSKVM 122

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 123 TRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166



 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++     + E R GC  V  +  K +GI T  D + R   ++
Sbjct: 220 STIIPENSKVVTVSPSETVLVVTKKMLESRSGCAVVTVDE-KPRGIFTSKDILMRVIAQN 278

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  ++  VE VM  NP+    DT +  A+  +       L VVD     + ++  + +  
Sbjct: 279 LPPDSTLVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGNIVAVIDVIHITH 338

Query: 338 FGI 340
             +
Sbjct: 339 AAV 341


>gi|39937306|ref|NP_949582.1| CBS/transport-associated domain-containing protein
           [Rhodopseudomonas palustris CGA009]
 gi|192293086|ref|YP_001993691.1| signal transduction protein with CBS domains [Rhodopseudomonas
           palustris TIE-1]
 gi|39651164|emb|CAE29687.1| CBS domain:Transport-associated domain [Rhodopseudomonas palustris
           CGA009]
 gi|192286835|gb|ACF03216.1| putative signal transduction protein with CBS domains
           [Rhodopseudomonas palustris TIE-1]
          Length = 243

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 27/140 (19%)

Query: 225 HSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           H   +  LV       ++DA   + +     + VVD+  KL GII+EGD  R        
Sbjct: 4   HQIMTRQLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIRRAEIGTQR 63

Query: 283 L------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                     V +VM ++P  I EDT +   ++L+ +H++    
Sbjct: 64  KRGRWLRMLLGPGTCAGDFVHEHGRKVGEVMTQHPYTISEDTSIETIVKLMEKHHVKRFP 123

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+      +GIV   +LLR 
Sbjct: 124 VM-RGDLLVGIVTRKNLLRA 142



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    I  +  +  A   +  +++S L VVDD  K IGI+   D +R
Sbjct: 1   MRAHQIMTRQLVTIGPEASIVDAANAMIDNHVSGLPVVDDDGKLIGIISEGDFIR 55


>gi|305665835|ref|YP_003862122.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
 gi|88710606|gb|EAR02838.1| CBS domain pair protein [Maribacter sp. HTCC2170]
          Length = 616

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL 283
                    +    +   + ++  K    V ++D    L G++T  D+ +   + + +  
Sbjct: 506 RMNIRTITAQENDSMELVLRMMQWKNIHHVPILDIHLDLVGLLTWTDVGKYLDRPEEHEQ 565

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S+  +M KN   +  +T L  A +L+ ++ I+ L VV   +K +GI+   DL
Sbjct: 566 SINQIMQKNLITVTPETPLDEATRLMEENEINCLPVV-RDKKLVGIITSKDL 616



 Score = 42.6 bits (99), Expect = 0.085,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 25/54 (46%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +   V + M        E+  + + +++++  NI  + ++D     +G++ + D
Sbjct: 499 DNRKVGERMNIRTITAQENDSMELVLRMMQWKNIHHVPILDIHLDLVGLLTWTD 552


>gi|118489093|gb|ABK96353.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 555

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  +M
Sbjct: 81  IPEGTTVFDACRRMAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIM 140

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ R
Sbjct: 141 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITR 184



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +     P+  A   + E R   V VV  G K++GI+T  D + R   ++
Sbjct: 238 STIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIVV-TGNKIQGILTSKDILMRVVAQN 296

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           L+     VE VM  NP+ +  +T +  A+ ++       L VVD     
Sbjct: 297 LSPELTLVEKVMTLNPECVTLETTILDALHVMHDGKFLHLPVVDKDGSV 345


>gi|149927334|ref|ZP_01915590.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
 gi|149824048|gb|EDM83271.1| cyclic nucleotide-binding protein [Limnobacter sp. MED105]
          Length = 619

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNP 293
             P+ +A   +++     V V DE Q L GI+T+ D   R   K L  +  +  +M ++P
Sbjct: 166 DTPVQEAAVQMAQSNQTAVIVQDESQSLIGIVTDQDFRDRVVAKGLPYSTPIRHIMTESP 225

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  + L+  AM L+ ++N   + V+ + +  +G+V   DL+++
Sbjct: 226 GTVNHNQLVFEAMMLMLRNNTQHVPVLKNSE-VVGMVSQSDLVKY 269



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 29/55 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           L T +++ ++  +P  +  DT +  A   + Q N + ++V D+ Q  IGIV   D
Sbjct: 147 LFTANIDQLISNSPLCLSGDTPVQEAAVQMAQSNQTAVIVQDESQSLIGIVTDQD 201


>gi|87198179|ref|YP_495436.1| signal-transduction protein [Novosphingobium aromaticivorans DSM
           12444]
 gi|87133860|gb|ABD24602.1| putative signal-transduction protein with CBS domains
           [Novosphingobium aromaticivorans DSM 12444]
          Length = 142

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  + V+     +        + DA+ +L+  R G + V D    + GI +E D+ R  H
Sbjct: 1   MTIAQVIAGRGEVWSCHADDSVADAVDMLARYRIGALPVEDGTNGVAGIFSERDMIRCLH 60

Query: 278 KD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           K       + V D+M      I   T +  A+ L+ Q     L VV +    +  V   D
Sbjct: 61  KHGEAALHMKVRDMMTAPVVTITPQTSVLEALALMTQRRFRHLPVV-EGGHMVAFVSIGD 119

Query: 335 LLR 337
           L++
Sbjct: 120 LVK 122


>gi|262279324|ref|ZP_06057109.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
 gi|262259675|gb|EEY78408.1| CBS domain-containing protein [Acinetobacter calcoaceticus RUH2202]
          Length = 143

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV +G+K+ GI++E D  R      +   + +V ++M
Sbjct: 19  ISPEATVLEAIKIMADKGIGAL-VVADGEKVVGILSERDYTRKVTLMERSSYSTTVAEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 78  TSKVLTVSLNNTVEECLQLMTDRHLRHLPVLDNE-KLVGFISIGDLVKA 125



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A++++    I  L+V D  +K +GI+   D  R 
Sbjct: 18  TISPEATVLEAIKIMADKGIGALVVAD-GEKVVGILSERDYTRK 60



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/85 (18%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+       +  +     +++M S      V +   + + + +++++    + V+D
Sbjct: 52  LSERDYTRKVTLMERSSYSTTVAEIMTSKVLT--VSLNNTVEECLQLMTDRHLRHLPVLD 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
             +KL G I+ GD+ +   +D   L
Sbjct: 110 -NEKLVGFISIGDLVKAAMEDQKNL 133


>gi|86156136|gb|ABC86786.1| IMP dehydrogenase [Borrelia turicatae]
          Length = 485

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 37/203 (18%), Positives = 78/203 (38%), Gaps = 20/203 (9%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE---- 195
           A+T ++ S++   + ++   + L  +         P  S+ M       +AIA+ +    
Sbjct: 9   ALTFDDVSLIPRKSSVLPSDVDLKTKLTKNISLNIPFLSSAMDTVTESRMAIAMAKEGGI 68

Query: 196 ---SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
               +N +  D              V          +   +     + +A  ++++ +  
Sbjct: 69  GIIHKNLTIEDQRK-------EVEIVKVYHRTGIIKNPITIDENANVQEAKILIAKHKIS 121

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V D+  K+ G++T  DI      ++    V + M K      ED  LT A ++L +H
Sbjct: 122 ALPVTDKTGKILGLVTNRDIKYITDDNV---PVINAMTKKLITAREDITLTEAKEILFRH 178

Query: 313 NISVLMVVDDCQKAIGIVHFLDL 335
            I  L++VD      G++   D+
Sbjct: 179 KIEKLLIVDKSNNLRGLITCKDI 201


>gi|237808917|ref|YP_002893357.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187]
 gi|237501178|gb|ACQ93771.1| inosine-5'-monophosphate dehydrogenase [Tolumonas auensis DSM 9187]
          Length = 487

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 43/172 (25%), Positives = 70/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M    G  LAIAL +     F   +  +     K+  +    S ++      
Sbjct: 41  NIPMASAAMDTVTGARLAIALAQEGGLGFIHKNMSIEQQADKVRRVKKFESGIV---TDP 97

Query: 231 PLVKIGCPLIDA--ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             V+    +     +T +S   FG   VVD    L GIIT  D+   F  DL ++ V +V
Sbjct: 98  VTVRPDMTIAQIKELTFMS--GFGGFPVVDTDGSLMGIITGRDVR--FVTDL-SMKVHEV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E+    V   L+++H I  +++V+D  K  G++   D  + 
Sbjct: 153 MTPKARLVTVHENASREVVQALMQKHRIEKVLIVNDDFKLTGMITVKDFQKA 204


>gi|242084930|ref|XP_002442890.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
 gi|241943583|gb|EES16728.1| hypothetical protein SORBIDRAFT_08g004470 [Sorghum bicolor]
          Length = 549

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      +  +M
Sbjct: 73  IPEGTTVSDACRRMAARRVDAVLLTDAHGLLSGIVTDKDIATRVIAEGLRVEQTIISKIM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  ++ DT    A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPIYVMSDTPAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 176



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 49/242 (20%), Positives = 86/242 (35%), Gaps = 20/242 (8%)

Query: 102 SHGDL-GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           +HG L G++T  D+   +   G   E   I     R  I +++ T   +++         
Sbjct: 99  AHGLLSGIVTDKDIATRVIAEGLRVEQTIISKIMTRNPIYVMSDTPAIEALQKMVQGKFR 158

Query: 161 TLPKEPESCPHGLA--------PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
            LP         +           +        G A+A A+         +F V  P   
Sbjct: 159 HLPVVENGEVIAMLDIAKCLYDAISRLEKAAEQGSAIAAAVEGVECQLGGNFSV--PSAL 216

Query: 213 LGTLFVC-----ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           + TL         S ++     + +V    P+  A   + E R   V VV  G  L+GI 
Sbjct: 217 IETLRERMFKPSLSTIVTENTKVAIVSPTDPVYVAAQKMREFRVNSV-VVATGNTLQGIF 275

Query: 268 TEGD-IFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T  D + R   +++  +   VE VM  NP     +T +  A+ ++       + V+D   
Sbjct: 276 TSKDILMRVVSQNISPDLTLVEKVMTANPDCATLETTILDALHIMHDGKFLHIPVIDKDG 335

Query: 325 KA 326
           + 
Sbjct: 336 QI 337


>gi|224122050|ref|XP_002318739.1| predicted protein [Populus trichocarpa]
 gi|222859412|gb|EEE96959.1| predicted protein [Populus trichocarpa]
          Length = 535

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + +A   ++ +R   + + D    L GI+T+ D+         +L    V  VM
Sbjct: 51  VPESTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDLASRVIAPEVNLEETPVSKVM 110

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 111 TRNPVFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 154



 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++     + E R GC  V  +  K +GI T  D + R   ++
Sbjct: 208 STIIPENSKVVTVSPSETVLVVTKKMLESRSGCAVVTVDE-KPRGIFTSKDILMRVIAQN 266

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  ++  VE VM  NP+    DT +  A+  +       L VVD     + ++  + +  
Sbjct: 267 LPPDSTLVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVVDRDGNIVAVIDVIHITH 326

Query: 338 FGI 340
             +
Sbjct: 327 AAV 329


>gi|11498453|ref|NP_069681.1| inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649754|gb|AAB90390.1| inosine monophosphate dehydrogenase (guaB-1) [Archaeoglobus
           fulgidus DSM 4304]
          Length = 189

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  VK    + +    L E   G   VV E  +  GI+TE D+       +K  + 
Sbjct: 11  MTTVVCTVKRTDSVHNLAKKLVEYGVGSAVVV-EDGRPVGIVTEKDLISKIVARNKVPSK 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + VE+VM +    I  +T L  A +++ +  I  L VV++ Q+ IGI+   D+L
Sbjct: 70  VLVEEVMSQPVITIGPNTSLREAARIMMKRGIRRLPVVNNNQELIGIITDNDIL 123



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L V++VM      +     +    + L ++ +   +VV +  + +GIV   DL+
Sbjct: 4   DLPVKEVMTTVVCTVKRTDSVHNLAKKLVEYGVGSAVVV-EDGRPVGIVTEKDLI 57


>gi|319787016|ref|YP_004146491.1| inosine-5'-monophosphate dehydrogenase [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317465528|gb|ADV27260.1| inosine-5'-monophosphate dehydrogenase [Pseudoxanthomonas
           suwonensis 11-1]
          Length = 486

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 81/203 (39%), Gaps = 13/203 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S+V  H+ ++   ++L            P  SA M       LAIA+ +    
Sbjct: 8   ALTYDDVSLVPAHSTVLPKDVSLETRLTRDLRVKLPIVSAAMDTVTEARLAIAMAQLGGI 67

Query: 200 S--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +       G++  +    + V+    +   V     + + + +   +    V VV
Sbjct: 68  GIIHKNLTAEQQAGEVAKVKKFEAGVIKDPFT---VGPDATIGEVLQLTRARNISGVPVV 124

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
           D+  +L GI+T  D+   F K L+   V  +M K      + E        QLL ++ I 
Sbjct: 125 DDNGQLVGIVTSRDMR--FEKKLDD-PVRHIMTKKDRLVTVKEGASDEEIFQLLHKNRIE 181

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            ++VV+D     G++   D+ + 
Sbjct: 182 KVLVVNDDFALRGLITVKDIQKK 204


>gi|313496573|gb|ADR57939.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
          Length = 145

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                          ++  +     ++DA+ +L+EK  G + VV EG ++ GI++E D  
Sbjct: 1   MKNVEQILKTKSQHQTVYTIGPDDSVLDALKLLAEKNVGALPVV-EGGQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VVD+  + +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVEPKQKLDFCMNLMTDRHLRHLPVVDN-GRLLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|225456355|ref|XP_002283958.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 546

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM
Sbjct: 68  VPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVM 127

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 128 TRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 171



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +  C  VV    + KGI+T  D + R   ++
Sbjct: 225 STIIPENSKVVTVSPTDTVLTAAKKMLELKLSCA-VVAVENRPKGILTSKDILMRVIAQN 283

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---IVHF 332
           L+  +  VE VM  NP+    DT +  A+  +       L V+D     +    ++H 
Sbjct: 284 LHPESTPVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHI 341


>gi|56419104|ref|YP_146422.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
 gi|56378946|dbj|BAD74854.1| inosine-5-monophosphate dehydrogenase [Geobacillus kaustophilus
           HTA426]
          Length = 148

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             ++  +     + +A  I+S+K  G + VV E  ++KG+IT+ DI 
Sbjct: 1   MTNNSGNKVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KD +T+ V +VM         +  +  A  ++ QH +  L +V +  +  GIV
Sbjct: 60  LRVSSQGKDPSTVKVAEVMTNQVVTGTPNMSVQEAANVMAQHQVRRLPIV-ENNQLQGIV 118

Query: 331 HFLDL 335
              D+
Sbjct: 119 ALGDI 123



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+D+M KN   I  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 8   KVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59


>gi|329945802|ref|ZP_08293489.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           170 str. F0386]
 gi|328528250|gb|EGF55228.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           170 str. F0386]
          Length = 520

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 59/168 (35%), Gaps = 7/168 (4%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            P  SA M       +AIA+           +  +     ++  +    S ++       
Sbjct: 61  TPLLSAAMDTVTESEMAIAMARQGGIGILHRNLSIEEQAQQVRRVKRSESGMV---TDPV 117

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V     +     +    +   + VVDEG  L+GIIT  D+     +   +L+V + M  
Sbjct: 118 TVGPDATIAQLDELCGHYKVSGLPVVDEGGNLQGIITNRDLRFVPTERWASLTVRECMTP 177

Query: 292 --NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                          A  LL +H I  L +VD   +  G++   D ++
Sbjct: 178 RDRLVTGATGISREDAKALLAEHRIEKLPLVDAEGRLTGLITVKDFVK 225


>gi|303251540|ref|ZP_07337714.1| inositol-5-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252224|ref|ZP_07338392.1| inositol-5-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302649007|gb|EFL79195.1| inositol-5-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302649538|gb|EFL79720.1| inositol-5-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
          Length = 487

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/210 (21%), Positives = 79/210 (37%), Gaps = 13/210 (6%)

Query: 136 RFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              I   A+T ++  +V  H+ +      L  +     H   P  SA M       LAI+
Sbjct: 1   MLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKDIHLNIPMLSAAMDTVTETKLAIS 60

Query: 193 LLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           L +     F   +  +     ++  +    S ++        V     L +   ++ +  
Sbjct: 61  LAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEPVTVSPDLTLAELAELVKKNG 117

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQL 308
           F    VVD    L GIIT  D    F +DL T +V  VM        + E       ++L
Sbjct: 118 FAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMTPKERLVTVKESANREEILEL 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + QH +  +++VDD  K  G++   D  + 
Sbjct: 175 MHQHRVEKVLMVDDNFKLKGMITVKDFQKA 204



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 142 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 201

Query: 273 FRNFHK 278
            +   K
Sbjct: 202 QKAEQK 207


>gi|260430723|ref|ZP_05784695.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260418164|gb|EEX11422.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 174

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           V+    +   + IL +KR G V V D+   L+GI++E DI R            SV+D+M
Sbjct: 49  VRPDDTIHTVVQILKDKRIGAVVVTDQNGALQGILSERDIVRRMADTPGQTLPQSVQDLM 108

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +    D LL   ++ + +     + V+       G++   D+++F +
Sbjct: 109 TREVRTCTPDDLLIEVVKTMTEGRFRHMPVL-RDGHLCGVITIGDVVQFRL 158


>gi|242277545|ref|YP_002989674.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242120439|gb|ACS78135.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 225

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 12/114 (10%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNTL 283
              ++ A  ++ +     + +VDE   L GI+++ DI                +  L+ +
Sbjct: 17  DRSMMKASKLMKDNDISRLPIVDEDGVLVGIVSDRDIKEASPSKATTLDMHELYYLLSEI 76

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V+D+M +    + ++  +  A  ++ ++ I  + VVD  +K +GI+   D+ +
Sbjct: 77  KVKDIMSRKVLTVSDEDTVEKAAVIMEENKIGGIPVVDSDRKCVGIITNTDVFK 130



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++ M K+   +  D  +  A +L++ ++IS L +VD+    +GIV   D+   
Sbjct: 3   VKNWMSKDVITLTHDRSMMKASKLMKDNDISRLPIVDEDGVLVGIVSDRDIKEA 56



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     +  A  I+ E + G + VVD  +K  GIIT  D+F+  
Sbjct: 89  VSDEDTVEKAAVIMEENKIGGIPVVDSDRKCVGIITNTDVFKVL 132


>gi|333001717|gb|EGK21283.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri K-218]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|320175071|gb|EFW50184.1| Inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae CDC
           74-1112]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|228957238|ref|ZP_04119004.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|229042690|ref|ZP_04190430.1| Transcriptional regulator, RpiR [Bacillus cereus AH676]
 gi|228726630|gb|EEL77847.1| Transcriptional regulator, RpiR [Bacillus cereus AH676]
 gi|228802429|gb|EEM49280.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pakistani str. T13001]
          Length = 287

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|297584686|ref|YP_003700466.1| CBS domain-containing protein [Bacillus selenitireducens MLS10]
 gi|297143143|gb|ADH99900.1| CBS domain containing protein [Bacillus selenitireducens MLS10]
          Length = 869

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                + ++     +  A  +L         VV E   + GII+  D+ +  H  L    
Sbjct: 312 MMSSPVRVIAPDTSIETASKMLYRYGHTGFPVV-EDDCITGIISRRDVDKALHHKLGHAP 370

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+  M +NP  I  DT +    +L+ +  I  L V++  +   GIV   D++R 
Sbjct: 371 VKGYMSRNPITIQPDTTIEEIRELMIEDQIGRLPVMNGTE-VAGIVSRSDVIRA 423



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L+ +D+M    +VI  DT +  A ++L ++  +   VV+D     GI+   D+ + 
Sbjct: 304 LPALTAKDMMSSPVRVIAPDTSIETASKMLYRYGHTGFPVVEDDC-ITGIISRRDVDKA 361


>gi|297734436|emb|CBI15683.3| unnamed protein product [Vitis vinifera]
          Length = 541

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     + +A   ++ +R   + + D    L GI+T+ DI  R   ++LN     V  VM
Sbjct: 63  VPDTTSIYEACRRMAARRVDALLLTDSNALLCGILTDKDIATRVIARELNLEETPVSKVM 122

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 123 TRNPIFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 7/118 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +  C  VV    + KGI+T  D + R   ++
Sbjct: 220 STIIPENSKVVTVSPTDTVLTAAKKMLELKLSCA-VVAVENRPKGILTSKDILMRVIAQN 278

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---IVHF 332
           L+  +  VE VM  NP+    DT +  A+  +       L V+D     +    ++H 
Sbjct: 279 LHPESTPVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVIDRDGGVVAVADVIHI 336


>gi|149279021|ref|ZP_01885155.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
 gi|149230300|gb|EDM35685.1| hypothetical protein PBAL39_04049 [Pedobacter sp. BAL39]
          Length = 142

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     ++DA+ ++ EK    + ++ E  +L GI TE D  R      K      + +VM
Sbjct: 18  VPASTSVLDALHVMMEKNISALLIM-ESGQLLGIFTERDYARKIILQGKSSADTFLAEVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              P  I  D  + V M+++   +I  L VV++    IG+V   D+++F
Sbjct: 77  TGQPITISPDDHIEVCMEIMTNKHIRHLPVVNETG-VIGMVSIGDVVKF 124


>gi|227497245|ref|ZP_03927485.1| IMP dehydrogenase [Actinomyces urogenitalis DSM 15434]
 gi|226833293|gb|EEH65676.1| IMP dehydrogenase [Actinomyces urogenitalis DSM 15434]
          Length = 509

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 64/174 (36%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AIA+          RN S  D        ++  +    S ++ 
Sbjct: 51  STPLLSAAMDTVTESEMAIAMARQGGIGILHRNLSIED-----QAQQVRRVKRSESGMV- 104

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +   +    +   + VVDEG  L GIIT  D+         TL V
Sbjct: 105 --SDPVTVGPDATIAELDKLCGHYKVSGLPVVDEGGNLLGIITNRDLRFVPADTWGTLRV 162

Query: 286 EDVMIKNPKVILEDTLL--TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D M    ++I   T +    A  LL +H I  L +VD   +  G++   D ++
Sbjct: 163 RDCMTPRERLITGPTGISREDAKALLAEHRIEKLPLVDATGRLTGLITVKDFVK 216


>gi|218895867|ref|YP_002444278.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           G9842]
 gi|228899499|ref|ZP_04063755.1| Transcriptional regulator, RpiR [Bacillus thuringiensis IBL 4222]
 gi|229143544|ref|ZP_04271969.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST24]
 gi|218545434|gb|ACK97828.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           G9842]
 gi|228639900|gb|EEK96305.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST24]
 gi|228860089|gb|EEN04493.1| Transcriptional regulator, RpiR [Bacillus thuringiensis IBL 4222]
          Length = 287

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|325001432|ref|ZP_08122544.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Pseudonocardia sp. P1]
          Length = 282

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 56/140 (40%), Gaps = 4/140 (2%)

Query: 201 ENDFYVLHPGGKLGT-LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
                    G   G  +       + +   +  V  G  L +A  +L   R+  V VVD+
Sbjct: 143 PEAMAPRGAGRVGGRPVSSLRVSDVMTDGGLVAVPPGLALDEAAEVLLSYRYTAVPVVDD 202

Query: 260 GQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             +L G+++E D+        +     +V  VM  + + +     L  A QLL +    V
Sbjct: 203 DDRLLGVVSEADLMAGSTYGGRRTRASTVAGVMTYDVETVHPGDPLADAEQLLAERGFRV 262

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           + VVDD    +G++   DLL
Sbjct: 263 IPVVDDDGVLVGVISRSDLL 282



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  V    PL  A   ++E RF  + VVD    L G+I+  D+ R  H+D    +V
Sbjct: 9   MTERVVTVWADAPLSRAQERMAEARFSALPVVDRRFSLVGVISLVDVLR--HRDDPNATV 66

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKAIGIVHFLDLLRF 338
            D M +    +   T +++    +R +  + ++ VV      +G++   DLLR 
Sbjct: 67  GDAMTEQVVTVQATTSVSIVAHRMRVYGELRLVPVVQRGG-LLGVITRSDLLRA 119



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   DVM +    +  D  L+ A + + +   S L VVD     +G++  +D+LR
Sbjct: 3   LRARDVMTERVVTVWADAPLSRAQERMAEARFSALPVVDRRFSLVGVISLVDVLR 57


>gi|34015153|gb|AAQ56349.1| putative CBS domain containing protein [Oryza sativa Japonica
           Group]
          Length = 190

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 33/155 (21%), Positives = 59/155 (38%), Gaps = 29/155 (18%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
           +      D M   + + +VK    + +A+ +L E R     V+D+   L G++++ D+  
Sbjct: 26  SGIYTVGDFMTKREELHVVKSTTSVDEALEMLVEHRITGFPVIDDEWNLVGVVSDYDLLA 85

Query: 274 ----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
                                       +      N   + DVM   P V+ E T L  A
Sbjct: 86  LDSISGNGLAEVDIFPEVDSTWKTFNEIQKLLSKTNGKVIGDVMTSAPLVVRETTNLEDA 145

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +LL +     L VVD   K +GI+   +++R  +
Sbjct: 146 ARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAAL 180



 Score = 42.6 bits (99), Expect = 0.087,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 26/47 (55%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +V+    L DA  +L E ++  + VVD   KL GIIT G++ R   K
Sbjct: 135 VVRETTNLEDAARLLLETKYRRLPVVDSSGKLVGIITRGNVVRAALK 181


>gi|308050449|ref|YP_003914015.1| inosine-5'-monophosphate dehydrogenase [Ferrimonas balearica DSM
           9799]
 gi|307632639|gb|ADN76941.1| inosine-5'-monophosphate dehydrogenase [Ferrimonas balearica DSM
           9799]
          Length = 487

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  +    + ++      
Sbjct: 41  NLPLLSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEQQAAEVRKVKKYEAGIV---QDP 97

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             V     +   +  ++E+  F    VV +  +L GIIT  D+          L+V +VM
Sbjct: 98  ITVTPDVTMR-TLREMAEQNGFAGYPVVADNNELIGIITGRDVRFVTDP---ELTVAEVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A  L+ +H I  ++VVD      G++   D  + 
Sbjct: 154 TPKERLVTVPEGAPLINAQALMHKHRIEKVLVVDAQFTLKGMITVKDFQKA 204


>gi|294637670|ref|ZP_06715949.1| inosine-5'-monophosphate dehydrogenase [Edwardsiella tarda ATCC
           23685]
 gi|291089225|gb|EFE21786.1| inosine-5'-monophosphate dehydrogenase [Edwardsiella tarda ATCC
           23685]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQADEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV EG +L GIIT  D+   F  DL  L V  VM 
Sbjct: 98  QTVTPTTTLREVKALTERNGFAGYPVVTEGNELVGIITGRDVR--FVTDL-DLPVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQRMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|225849609|ref|YP_002729843.1| cbs domain containing protein [Persephonella marina EX-H1]
 gi|225646065|gb|ACO04251.1| cbs domain containing protein [Persephonella marina EX-H1]
          Length = 139

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIK 291
               P+ D   ++ +K  G V +V E  +  GI+T+ DI  R    D    + V+++M +
Sbjct: 15  SPDTPVKDVAKLMRDKNVGSVVIV-ENNRPVGIVTDRDIAIRVLGNDQPAEIPVKNIMTE 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           NP  + ED  +  A++ ++   +    VVD+     GIV   D +
Sbjct: 74  NPVTLKEDEGIFEALERVKDVGVRRFPVVDNDGNLTGIVTIDDFV 118



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++V  K       DT +    +L+R  N+  +++V +  + +GIV   D+
Sbjct: 3   IKNVARKEVITASPDTPVKDVAKLMRDKNVGSVVIV-ENNRPVGIVTDRDI 52


>gi|118473395|ref|YP_884608.1| RpiR family transcriptional regulator protein [Mycobacterium
           smegmatis str. MC2 155]
 gi|118174682|gb|ABK75578.1| transcriptional regulator, RpiR family protein [Mycobacterium
           smegmatis str. MC2 155]
          Length = 300

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 7/193 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +   + I  E R L    ++L  E+    + A++ +   + RV I+G+G S  +   L  
Sbjct: 105 EIVKKIIYNEIRVLEDTGAALDIEM---LNRAIDVVSGAR-RVDISGVGASAFVAQDLHQ 160

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G  +F      ++     ++   D+   +S SG +D++   L  A       IA+
Sbjct: 161 KLHRIGRIAFVWSDRHSAVTAAALLGPGDVAFAVSHSGETDDVVEFLDAAAGCGATTIAL 220

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+  +S +A  ADIVLT        P     T S I QLA+ D L + + + R+F E   
Sbjct: 221 TNSPRSALAEAADIVLTT--CARETPFRSGATVSRIAQLAVVDCLFVGVAQ-RSFGETTT 277

Query: 205 YVLHPGGKLGTLF 217
            +      +    
Sbjct: 278 ALEKTHAAVQRHR 290


>gi|51892943|ref|YP_075634.1| putative poly A polymerase [Symbiobacterium thermophilum IAM 14863]
 gi|51856632|dbj|BAD40790.1| putative poly A polymerase [Symbiobacterium thermophilum IAM 14863]
          Length = 890

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 47/104 (45%), Gaps = 3/104 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           P+ DA  ++       + VVDE  ++ G+++  D+ +     L    V+ VM      + 
Sbjct: 337 PIRDAERLMLRHGHTGLPVVDEQGRVVGVVSLRDVEKARRHGLEHAPVKSVMRSQVIAVH 396

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            DT      +L+ + +I  + VV      +GI+   D+L  G+I
Sbjct: 397 PDTPADEVQELMIERDIGRVPVV-ADGNLVGIITRSDIL--GLI 437



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 53/126 (42%), Gaps = 20/126 (15%)

Query: 225 HSGDSIPLV-KIGCPLIDAITILSEKRFGC-----------VAVVDEGQKLKGIITEGDI 272
              D + LV +   P +DA  +++    G            ++V +  ++L+ ++ +G  
Sbjct: 257 RMDDRVHLVGRSSVPWVDAARVMARFGGGGHPAAASAVVKGLSVEEAAERLEEVLPDGVE 316

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +        DVM    K IL    +  A +L+ +H  + L VVD+  + +G+V  
Sbjct: 317 RPLMAR--------DVMSAPVKTILARKPIRDAERLMLRHGHTGLPVVDEQGRVVGVVSL 368

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 369 RDVEKA 374



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               + G        VM S      V    P  +   ++ E+  G V VV +G  L GII
Sbjct: 372 EKARRHGLEHAPVKSVMRSQVIA--VHPDTPADEVQELMIERDIGRVPVVADGN-LVGII 428

Query: 268 TEGDIF 273
           T  DI 
Sbjct: 429 TRSDIL 434


>gi|42783790|ref|NP_981037.1| thioesterase family protein [Bacillus cereus ATCC 10987]
 gi|47565023|ref|ZP_00236066.1| CBS domain protein [Bacillus cereus G9241]
 gi|206977129|ref|ZP_03238028.1| thioesterase family protein [Bacillus cereus H3081.97]
 gi|217962092|ref|YP_002340662.1| thioesterase family protein [Bacillus cereus AH187]
 gi|222098074|ref|YP_002532131.1| thioesterase family protein [Bacillus cereus Q1]
 gi|228987860|ref|ZP_04147969.1| hypothetical protein bthur0001_45280 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|229141338|ref|ZP_04269876.1| hypothetical protein bcere0013_44310 [Bacillus cereus BDRD-ST26]
 gi|229158215|ref|ZP_04286282.1| hypothetical protein bcere0010_43930 [Bacillus cereus ATCC 4342]
 gi|229198763|ref|ZP_04325459.1| hypothetical protein bcere0001_42850 [Bacillus cereus m1293]
 gi|42739720|gb|AAS43645.1| thioesterase family protein [Bacillus cereus ATCC 10987]
 gi|47557809|gb|EAL16134.1| CBS domain protein [Bacillus cereus G9241]
 gi|206744614|gb|EDZ56022.1| thioesterase family protein [Bacillus cereus H3081.97]
 gi|217063541|gb|ACJ77791.1| thioesterase family protein [Bacillus cereus AH187]
 gi|221242132|gb|ACM14842.1| thioesterase family protein [Bacillus cereus Q1]
 gi|228584696|gb|EEK42818.1| hypothetical protein bcere0001_42850 [Bacillus cereus m1293]
 gi|228625173|gb|EEK81933.1| hypothetical protein bcere0010_43930 [Bacillus cereus ATCC 4342]
 gi|228642119|gb|EEK98412.1| hypothetical protein bcere0013_44310 [Bacillus cereus BDRD-ST26]
 gi|228771908|gb|EEM20365.1| hypothetical protein bthur0001_45280 [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|324328503|gb|ADY23763.1| thioesterase family protein [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 437

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPDDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|307328619|ref|ZP_07607792.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
 gi|306885731|gb|EFN16744.1| CBS domain containing protein [Streptomyces violaceusniger Tu 4113]
          Length = 139

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     ++ A  ++ +   G + V D  ++L GI+T+ DI       + D + 
Sbjct: 8   MHPGAQWIPENESVLRAAQMMRDLGVGALPVSDSNERLCGIVTDRDIVVGCIAENCDPSR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V  +    P+ I  D  +T  ++ + +H I  L V+D  ++ +G++   DL
Sbjct: 68  TPVGQLTEGTPRWIPADADVTDVLREMEEHKIRRLPVIDQNKRLVGMISEADL 120



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               D+M    + I E+  +  A Q++R   +  L V D  ++  GIV   D++
Sbjct: 2   TKAADIMHPGAQWIPENESVLRAAQMMRDLGVGALPVSDSNERLCGIVTDRDIV 55



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           +  +   +     + D +  + E +   + V+D+ ++L G+I+E D+  +   DL
Sbjct: 74  TEGTPRWIPADADVTDVLREMEEHKIRRLPVIDQNKRLVGMISEADLAHHLSDDL 128


>gi|302342909|ref|YP_003807438.1| CBS domain containing protein [Desulfarculus baarsii DSM 2075]
 gi|301639522|gb|ADK84844.1| CBS domain containing protein [Desulfarculus baarsii DSM 2075]
          Length = 197

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 3/115 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTL 283
                +        +  A+ ++ E+    + V+ E  +L G++T+ ++    F   L+ L
Sbjct: 6   RMSSPVQTTTPQASVDSALKMMRERDVRHLPVL-EQGRLVGLVTDTELRTAWFPSLLDKL 64

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V DVM+K+P  I  D  +  A +L+  + I+ L V+D   K +G++   D+L+ 
Sbjct: 65  NVNDVMVKHPVTIGADETVYQAARLIHHNRITGLPVLD-GGKLVGMITQADILQL 118



 Score = 43.7 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 9/49 (18%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V D M    +       +  A++++R+ ++  L V+ +  + +G+V 
Sbjct: 1   MKVRDRMSSPVQTTTPQASVDSALKMMRERDVRHLPVL-EQGRLVGLVT 48


>gi|307312497|ref|ZP_07592130.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli W]
 gi|306907420|gb|EFN37924.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli W]
 gi|315061827|gb|ADT76154.1| IMP dehydrogenase [Escherichia coli W]
 gi|323377592|gb|ADX49860.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli KO11]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|302024659|ref|ZP_07249870.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis 05HAS68]
          Length = 251

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 62  NLPIISAAMDTVTDSKMAIAMARAGGLG-----VIHKNMSIAEQADEVRKVKRSENGVII 116

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +++  R   V +V+  E +KL GIIT  D+         +  + 
Sbjct: 117 DPFFLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISD---YSQPIS 173

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +  V     T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 174 TNMTSDALVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDI 223


>gi|187924051|ref|YP_001895693.1| hypothetical protein Bphyt_2066 [Burkholderia phytofirmans PsJN]
 gi|187715245|gb|ACD16469.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
          Length = 163

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 51/107 (47%), Gaps = 5/107 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMI 290
           +    + DA+ I++ +R G + VV E  ++ GI+TE D  R     H+      V D+M 
Sbjct: 20  QASTSVYDAVAIMAHRRVGALIVVHE-GRVAGIVTERDYARKIALMHRSSRNTPVRDIMS 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + +         M L+ ++ I  L V+ +  + IG+V   DL++
Sbjct: 79  TTVRYVGPGQTTEECMALMTEYRIRYLPVITE-GQVIGMVSIGDLIK 124


>gi|37526603|ref|NP_929947.1| inositol-5-monophosphate dehydrogenase [Photorhabdus luminescens
           subsp. laumondii TTO1]
 gi|36786035|emb|CAE15087.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Photorhabdus luminescens subsp. laumondii TTO1]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTSSICLKVPMLSAAMDTVTESGLAIALAQEGGMGFIHKNMSIERQAEEVSRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     L +   +     F    VV EG +L GIIT  D+   F  
Sbjct: 89  HESGVV---TDPVTVAPETTLREVKELTERNGFAGYPVVTEGNELVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL+   V  VM        + E     V +Q + +  +   +VVD+    +G++   D  
Sbjct: 144 DLDQ-PVTAVMTPKARLVTVKEGEAREVVLQKMHEKRVEKALVVDENFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|302390701|ref|YP_003826522.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermosediminibacter oceani DSM 16646]
 gi|302201329|gb|ADL08899.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermosediminibacter oceani DSM 16646]
          Length = 367

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 51/132 (38%), Gaps = 4/132 (3%)

Query: 201 ENDFYVLHPGGK-LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +DF     G K +               +         L  A+ I+SE     + VVD+
Sbjct: 228 ADDFVENLIGKKRIWKQPEYVMAGDIMITNPVKTLPSRTLAQAVEIMSESGVDSILVVDK 287

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L GI+T  DI            +E++  +N   +  D  +   ++L+ Q NI  + V
Sbjct: 288 ENRLLGIVTAEDIR---AGRDKAKKLEEIYTRNVFTVKPDDSILDVLRLMSQKNIGYVPV 344

Query: 320 VDDCQKAIGIVH 331
           VD+     G++ 
Sbjct: 345 VDENNVLKGLIT 356



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              D+MI NP   L    L  A++++ +  +  ++VVD   + +GIV   D+ R G
Sbjct: 249 MAGDIMITNPVKTLPSRTLAQAVEIMSESGVDSILVVDKENRLLGIVTAEDI-RAG 303


>gi|254525290|ref|ZP_05137345.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
 gi|219722881|gb|EED41406.1| CBS domain containing protein [Stenotrophomonas sp. SKA14]
          Length = 143

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  V     +IDAI +++EK  G V V+D G +L GI++E D  R      +    
Sbjct: 11  KSPEVHAVAPDAAVIDAIRLMAEKGIGAVLVMD-GARLVGILSERDYARKIVLRDRSSRD 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V ++M      +     +   +QL+  + I  L VV+  Q  +G++   DL++
Sbjct: 70  TAVAEIMTAQVVTVSPGEQVEHCLQLVTDYRIRHLPVVEGAQ-VLGVISIGDLVK 123


>gi|296501557|ref|YP_003663257.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
 gi|296322609|gb|ADH05537.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           BMB171]
          Length = 262

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I    G+++  G+G S       A      G  +  +  
Sbjct: 84  AAIEASVTAIDKKELEKAADRIVNA-GKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 142

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 143 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 202

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 203 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 241


>gi|160897815|ref|YP_001563397.1| signal-transduction protein [Delftia acidovorans SPH-1]
 gi|160363399|gb|ABX35012.1| putative signal-transduction protein with CBS domains [Delftia
           acidovorans SPH-1]
          Length = 146

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     ++DA+ ++++K  G + V+ EG ++ GI+TE D  R      +      V DVM
Sbjct: 19  IAPTDSVLDALRLMADKGIGALLVM-EGSEIAGIVTERDYARKIALLGRTSGATLVRDVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++   +         M ++ ++ +  L VVD+  K +G++   DL++
Sbjct: 78  TRDVLFVGPTQTTQECMAVMTENRLRHLPVVDEGGKLLGLISIGDLVK 125



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        LG               +  V       + + +++E R   + VVDE
Sbjct: 53  TERDYA--RKIALLGRTSGATLVRDVMTRDVLFVGPTQTTQECMAVMTENRLRHLPVVDE 110

Query: 260 GQKLKGIITEGDIFRNF 276
           G KL G+I+ GD+ ++ 
Sbjct: 111 GGKLLGLISIGDLVKDI 127


>gi|110806439|ref|YP_689959.1| inosine 5'-monophosphate dehydrogenase [Shigella flexneri 5 str.
           8401]
 gi|110615987|gb|ABF04654.1| IMP dehydrogenase [Shigella flexneri 5 str. 8401]
 gi|281601910|gb|ADA74894.1| Inosine-5'-monophosphate dehydrogenase [Shigella flexneri 2002017]
          Length = 490

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 43  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 100 QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 157 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 206


>gi|15803032|ref|NP_289062.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           EDL933]
 gi|15832624|ref|NP_311397.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. Sakai]
 gi|16130433|ref|NP_417003.1| IMP dehydrogenase [Escherichia coli str. K-12 substr. MG1655]
 gi|30063900|ref|NP_838071.1| inosine 5'-monophosphate dehydrogenase [Shigella flexneri 2a str.
           2457T]
 gi|56480121|ref|NP_708347.2| inosine 5'-monophosphate dehydrogenase [Shigella flexneri 2a str.
           301]
 gi|74313034|ref|YP_311453.1| inosine 5'-monophosphate dehydrogenase [Shigella sonnei Ss046]
 gi|82544957|ref|YP_408904.1| inosine 5'-monophosphate dehydrogenase [Shigella boydii Sb227]
 gi|89109314|ref|AP_003094.1| IMP dehydrogenase [Escherichia coli str. K-12 substr. W3110]
 gi|157155040|ref|YP_001463831.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli E24377A]
 gi|157161983|ref|YP_001459301.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli HS]
 gi|170019209|ref|YP_001724163.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli ATCC 8739]
 gi|170082118|ref|YP_001731438.1| IMP dehydrogenase [Escherichia coli str. K-12 substr. DH10B]
 gi|170767295|ref|ZP_02901748.1| inosine-5'-monophosphate dehydrogenase [Escherichia albertii
           TW07627]
 gi|187733701|ref|YP_001881299.1| inosine 5'-monophosphate dehydrogenase [Shigella boydii CDC
           3083-94]
 gi|193068323|ref|ZP_03049286.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E110019]
 gi|194427275|ref|ZP_03059825.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B171]
 gi|194437628|ref|ZP_03069724.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 101-1]
 gi|195936650|ref|ZP_03082032.1| inositol-5-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. EC4024]
 gi|209919985|ref|YP_002294069.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli SE11]
 gi|218548058|ref|YP_002381849.1| inosine 5'-monophosphate dehydrogenase [Escherichia fergusonii ATCC
           35469]
 gi|218555033|ref|YP_002387946.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli IAI1]
 gi|218690623|ref|YP_002398835.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli ED1a]
 gi|218696135|ref|YP_002403802.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli 55989]
 gi|218701015|ref|YP_002408644.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli IAI39]
 gi|238901673|ref|YP_002927469.1| IMP dehydrogenase [Escherichia coli BW2952]
 gi|253772598|ref|YP_003035429.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162482|ref|YP_003045590.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli B str.
           REL606]
 gi|254794454|ref|YP_003079291.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. TW14359]
 gi|256017344|ref|ZP_05431209.1| inosine 5'-monophosphate dehydrogenase [Shigella sp. D9]
 gi|256021806|ref|ZP_05435671.1| inosine 5'-monophosphate dehydrogenase [Escherichia sp. 4_1_40B]
 gi|260845138|ref|YP_003222916.1| IMP dehydrogenase [Escherichia coli O103:H2 str. 12009]
 gi|260856602|ref|YP_003230493.1| IMP dehydrogenase [Escherichia coli O26:H11 str. 11368]
 gi|260869197|ref|YP_003235599.1| IMP dehydrogenase [Escherichia coli O111:H- str. 11128]
 gi|261223060|ref|ZP_05937341.1| IMP dehydrogenase [Escherichia coli O157:H7 str. FRIK2000]
 gi|261259389|ref|ZP_05951922.1| IMP dehydrogenase [Escherichia coli O157:H7 str. FRIK966]
 gi|291283729|ref|YP_003500547.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
 gi|293415773|ref|ZP_06658416.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B185]
 gi|307139143|ref|ZP_07498499.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli H736]
 gi|312973251|ref|ZP_07787423.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 1827-70]
 gi|331643127|ref|ZP_08344262.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H736]
 gi|331648202|ref|ZP_08349292.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli M605]
 gi|331653936|ref|ZP_08354937.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli M718]
 gi|331658648|ref|ZP_08359592.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA206]
 gi|331669254|ref|ZP_08370102.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA271]
 gi|331678498|ref|ZP_08379173.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H591]
 gi|331684153|ref|ZP_08384749.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H299]
 gi|83309007|sp|P0ADG8|IMDH_ECO57 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|83309008|sp|P0ADG7|IMDH_ECOLI RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|83309009|sp|P0ADG9|IMDH_SHIFL RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|12516900|gb|AAG57619.1|AE005480_6 IMP dehydrogenase [Escherichia coli O157:H7 str. EDL933]
 gi|1788855|gb|AAC75561.1| IMP dehydrogenase [Escherichia coli str. K-12 substr. MG1655]
 gi|13362840|dbj|BAB36793.1| IMP dehydrogenase [Escherichia coli O157:H7 str. Sakai]
 gi|30042155|gb|AAP17881.1| IMP dehydrogenase [Shigella flexneri 2a str. 2457T]
 gi|56383672|gb|AAN44054.2| IMP dehydrogenase [Shigella flexneri 2a str. 301]
 gi|73856511|gb|AAZ89218.1| IMP dehydrogenase [Shigella sonnei Ss046]
 gi|81246368|gb|ABB67076.1| IMP dehydrogenase [Shigella boydii Sb227]
 gi|85675431|dbj|BAA16395.2| IMP dehydrogenase [Escherichia coli str. K12 substr. W3110]
 gi|157067663|gb|ABV06918.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli HS]
 gi|157077070|gb|ABV16778.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E24377A]
 gi|169754137|gb|ACA76836.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli ATCC 8739]
 gi|169889953|gb|ACB03660.1| IMP dehydrogenase [Escherichia coli str. K-12 substr. DH10B]
 gi|170123629|gb|EDS92560.1| inosine-5'-monophosphate dehydrogenase [Escherichia albertii
           TW07627]
 gi|187430693|gb|ACD09967.1| inosine-5'-monophosphate dehydrogenase [Shigella boydii CDC
           3083-94]
 gi|192958275|gb|EDV88715.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E110019]
 gi|194414596|gb|EDX30868.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B171]
 gi|194423434|gb|EDX39425.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 101-1]
 gi|209763438|gb|ACI80031.1| IMP dehydrogenase [Escherichia coli]
 gi|209763440|gb|ACI80032.1| IMP dehydrogenase [Escherichia coli]
 gi|209763442|gb|ACI80033.1| IMP dehydrogenase [Escherichia coli]
 gi|209763444|gb|ACI80034.1| IMP dehydrogenase [Escherichia coli]
 gi|209763446|gb|ACI80035.1| IMP dehydrogenase [Escherichia coli]
 gi|209913244|dbj|BAG78318.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli SE11]
 gi|218352867|emb|CAU98666.1| IMP dehydrogenase [Escherichia coli 55989]
 gi|218355599|emb|CAQ88210.1| IMP dehydrogenase [Escherichia fergusonii ATCC 35469]
 gi|218361801|emb|CAQ99400.1| IMP dehydrogenase [Escherichia coli IAI1]
 gi|218371001|emb|CAR18829.1| IMP dehydrogenase [Escherichia coli IAI39]
 gi|218428187|emb|CAR09102.2| IMP dehydrogenase [Escherichia coli ED1a]
 gi|238861504|gb|ACR63502.1| IMP dehydrogenase [Escherichia coli BW2952]
 gi|242378106|emb|CAQ32879.1| IMP dehydrogenase [Escherichia coli BL21(DE3)]
 gi|253323642|gb|ACT28244.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974383|gb|ACT40054.1| inositol-5-monophosphate dehydrogenase [Escherichia coli B str.
           REL606]
 gi|253978550|gb|ACT44220.1| inositol-5-monophosphate dehydrogenase [Escherichia coli BL21(DE3)]
 gi|254593854|gb|ACT73215.1| IMP dehydrogenase [Escherichia coli O157:H7 str. TW14359]
 gi|257755251|dbj|BAI26753.1| IMP dehydrogenase [Escherichia coli O26:H11 str. 11368]
 gi|257760285|dbj|BAI31782.1| IMP dehydrogenase [Escherichia coli O103:H2 str. 12009]
 gi|257765553|dbj|BAI37048.1| IMP dehydrogenase [Escherichia coli O111:H- str. 11128]
 gi|260448412|gb|ACX38834.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli DH1]
 gi|290763602|gb|ADD57563.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli O55:H7
           str. CB9615]
 gi|291433421|gb|EFF06400.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli B185]
 gi|309702840|emb|CBJ02171.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli ETEC
           H10407]
 gi|310331846|gb|EFP99081.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 1827-70]
 gi|313650994|gb|EFS15394.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri 2a str.
           2457T]
 gi|315137132|dbj|BAJ44291.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli DH1]
 gi|315615767|gb|EFU96399.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 3431]
 gi|320200071|gb|EFW74660.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli EC4100B]
 gi|320640852|gb|EFX10340.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. G5101]
 gi|320646295|gb|EFX15222.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H-
           str. 493-89]
 gi|320651800|gb|EFX20180.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H-
           str. H 2687]
 gi|320657186|gb|EFX24995.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320662792|gb|EFX30124.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320667596|gb|EFX34511.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O157:H7
           str. LSU-61]
 gi|323156161|gb|EFZ42320.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli EPECa14]
 gi|323159378|gb|EFZ45363.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E128010]
 gi|323169048|gb|EFZ54725.1| inosine-5'-monophosphate dehydrogenase [Shigella sonnei 53G]
 gi|323170221|gb|EFZ55874.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli LT-68]
 gi|323177369|gb|EFZ62957.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 1180]
 gi|323184431|gb|EFZ69806.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 1357]
 gi|323188152|gb|EFZ73445.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli RN587/1]
 gi|323936401|gb|EGB32691.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E1520]
 gi|323941230|gb|EGB37415.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E482]
 gi|323944730|gb|EGB40797.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H120]
 gi|323961318|gb|EGB56930.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H489]
 gi|323967953|gb|EGB63365.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli M863]
 gi|323971079|gb|EGB66327.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA007]
 gi|323977313|gb|EGB72399.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TW10509]
 gi|324112999|gb|EGC06975.1| inosine-5'-monophosphate dehydrogenase [Escherichia fergusonii
           B253]
 gi|324118148|gb|EGC12045.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli E1167]
 gi|327252211|gb|EGE63883.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli STEC_7v]
 gi|331039925|gb|EGI12145.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H736]
 gi|331043062|gb|EGI15202.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli M605]
 gi|331048785|gb|EGI20861.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli M718]
 gi|331054313|gb|EGI26340.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA206]
 gi|331064448|gb|EGI36359.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA271]
 gi|331074958|gb|EGI46278.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H591]
 gi|331079105|gb|EGI50307.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H299]
 gi|332092770|gb|EGI97839.1| inosine-5'-monophosphate dehydrogenase [Shigella boydii 3594-74]
 gi|332344379|gb|AEE57713.1| inosine-5'-monophosphate dehydrogenase GuaB [Escherichia coli
           UMNK88]
 gi|332754195|gb|EGJ84563.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri 4343-70]
 gi|332755558|gb|EGJ85922.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri K-671]
 gi|332756533|gb|EGJ86884.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri 2747-71]
 gi|332766341|gb|EGJ96551.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri 2930-71]
 gi|333000696|gb|EGK20272.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri VA-6]
 gi|333002303|gb|EGK21867.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri K-272]
 gi|333016126|gb|EGK35458.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri K-227]
 gi|333016408|gb|EGK35739.1| inosine-5'-monophosphate dehydrogenase [Shigella flexneri K-304]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|28899930|ref|NP_799585.1| hypothetical protein VPA0075 [Vibrio parahaemolyticus RIMD 2210633]
 gi|254227512|ref|ZP_04920944.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|260363224|ref|ZP_05776093.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|260880511|ref|ZP_05892866.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260898536|ref|ZP_05907032.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260902237|ref|ZP_05910632.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
 gi|262396222|ref|YP_003288075.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|28808213|dbj|BAC61418.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
 gi|151940124|gb|EDN58950.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|262339816|gb|ACY53610.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|308084963|gb|EFO34658.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308092451|gb|EFO42146.1| cyclic nucleotide binding/CBS domain protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308110479|gb|EFO48019.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308112509|gb|EFO50049.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|328469917|gb|EGF40828.1| Signal transduction protein [Vibrio parahaemolyticus 10329]
          Length = 622

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-L 283
           + ++I +V +   +      +  K+    AVV +  ++ G++T+ D+ ++   +D++T  
Sbjct: 162 ASENIAIVDVNDSIRSVAQTMCGKQRSSCAVVMKEGEIIGLVTDRDMTKSVVAQDMDTNQ 221

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + DVM  NP +I +D  +  A+ L+ Q+NI  L VV   ++  G++    L+
Sbjct: 222 PIADVMTPNPVLIEDDAKVIQAISLMLQYNIRCLPVV-HGKQVKGLLTTTHLV 273


>gi|308187760|ref|YP_003931891.1| inosine-5'-monophosphate dehydrogenase [Pantoea vagans C9-1]
 gi|308058270|gb|ADO10442.1| inosine-5'-monophosphate dehydrogenase [Pantoea vagans C9-1]
          Length = 488

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQADEVRKVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V    PL D   +     F    VV+   +L GIIT  D+   F  DL +  V  VM 
Sbjct: 98  QTVLPTTPLADVKALTERNGFAGYPVVNLDNELVGIITGRDVR--FVTDL-SQPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKDRLVTVKEGEARDVVLQKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|297531207|ref|YP_003672482.1| hypothetical protein GC56T3_2965 [Geobacillus sp. C56-T3]
 gi|297254459|gb|ADI27905.1| CBS domain containing protein [Geobacillus sp. C56-T3]
          Length = 148

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             ++  +     + +A  I+S+K  G + VV E  ++KG+IT+ DI 
Sbjct: 1   MTNNSGNKVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KD +T+ V +VM         +  +  A  ++ QH +  L +V +  +  GIV
Sbjct: 60  LRVSSQGKDPSTVKVAEVMTNQVVTGTPNMSVQEAANVMAQHQVRRLPIV-ENNQLQGIV 118

Query: 331 HFLDL 335
              D+
Sbjct: 119 ALGDI 123



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+D+M KN   I  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 8   KVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59


>gi|225075035|ref|ZP_03718234.1| hypothetical protein NEIFLAOT_00034 [Neisseria flavescens
           NRL30031/H210]
 gi|224953631|gb|EEG34840.1| hypothetical protein NEIFLAOT_00034 [Neisseria flavescens
           NRL30031/H210]
          Length = 282

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 58/140 (41%), Gaps = 3/140 (2%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            I     RV   G+G SG +           G  +              ++T  D+++ +
Sbjct: 122 AILKHARRVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLTEQDVLVAI 181

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S +GSS EL      A+     +IA+T    S +A  AD VL++  +  +  +   P  S
Sbjct: 182 SNTGSSIELLDAASIAKENGAAVIALTRN-DSPLAQMADCVLSIATQENAELY--TPMVS 238

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++QLA+ D LAI L     
Sbjct: 239 RLLQLAVIDILAIGLALRLG 258


>gi|213019464|ref|ZP_03335270.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
 gi|212994886|gb|EEB55528.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus JHB]
          Length = 492

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 37  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 93

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +A++++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 94  ITISPDKTVAEAVSLMREYNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNIKVSEVMT 151

Query: 291 KN-PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E  + +  AM+LL  + I  L+VVD+    IG++   D+ ++
Sbjct: 152 KDKLVTVREQAVNSASAMKLLHANRIEKLLVVDENSCCIGLITVKDIEKY 201


>gi|56962085|ref|YP_173808.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
 gi|56908320|dbj|BAD62847.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
          Length = 282

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 81/206 (39%), Gaps = 19/206 (9%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCA-------LRSIIAEKRGLSSLESSLQGELSFQFHC 55
           F     K VT     L   S++Q          R     K  +    SS+  +   Q   
Sbjct: 67  FKMELMKDVTASKERLTDFSSLQEKDAPYDLFRRVTFTNKSAIELSLSSIDRK---QLEA 123

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI---TRD 112
           AV  +   K R+V  G+G S       +      G  +         H +L +I    + 
Sbjct: 124 AVAVLMTAK-RIVFYGVGGSAAAAFDGSYKFTRIGYQASSSQD---FHYNLSLIPYMEKG 179

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+ + +S SG + ++  +  +A++  + ++AIT  ++S +   ADI L  P   E    G
Sbjct: 180 DIFVAISLSGKTQDVVELATFAKKQGVTVVAITKMDRSPLYRLADITLCTPNVEEDFRIG 239

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN 198
                S + QL I D L +++   ++
Sbjct: 240 TI--ASRMTQLNIIDTLYLSVFHEKD 263


>gi|222111496|ref|YP_002553760.1| signal transduction protein with cbs domains [Acidovorax ebreus
           TPSY]
 gi|221730940|gb|ACM33760.1| putative signal transduction protein with CBS domains [Acidovorax
           ebreus TPSY]
          Length = 145

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDL 280
             +   +  V+    ++ A+  +++K  G + V+ EG ++ GI TE D  R      +  
Sbjct: 10  TKADGQVHAVEPSDTVLTALRRMADKGIGALLVM-EGDQIAGIFTERDYARKMVLLGRSS 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               V +VM +  + +         M L+ ++ +  L VV +  + +G+V   DL++
Sbjct: 69  GDTPVSEVMTRAVRFVRPTQSAEQCMALMTENRLRHLPVV-EAGRVVGLVSIGDLVK 124



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/78 (17%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+        LG              ++  V+        + +++E R   + VV 
Sbjct: 52  FTERDYA--RKMVLLGRSSGDTPVSEVMTRAVRFVRPTQSAEQCMALMTENRLRHLPVV- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  ++ G+++ GD+ ++ 
Sbjct: 109 EAGRVVGLVSIGDLVKSV 126


>gi|153838938|ref|ZP_01991605.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
 gi|149747609|gb|EDM58537.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
          Length = 622

 Score = 86.9 bits (214), Expect = 4e-15,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-L 283
           + ++I +V +   +      +  K+    AVV +  ++ G++T+ D+ ++   +D++T  
Sbjct: 162 ASENIAIVDVNDSIRSVAQTMCGKQRSSCAVVMKEGEIIGLVTDRDMTKSVVAQDMDTNQ 221

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + DVM  NP +I +D  +  A+ L+ Q+NI  L VV   ++  G++    L+
Sbjct: 222 PIADVMTPNPVLIEDDAKVIQAISLMLQYNIRCLPVV-HGKQVKGLLTTTHLV 273


>gi|307247567|ref|ZP_07529611.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307252147|ref|ZP_07534046.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307261050|ref|ZP_07542732.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306855932|gb|EFM88091.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306860447|gb|EFM92461.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306869352|gb|EFN01147.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
          Length = 465

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 68/182 (37%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +     H   P  SA M       LAI+L +     F   +  +     ++  +  
Sbjct: 7   DLSTQLTKDIHLNIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKK 66

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S ++        V     L +   ++ +  F    VVD    L GIIT  D    F +
Sbjct: 67  FESGIV---SEPVTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVR 121

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL T +V  VM        + E       ++L+ QH +  +++VDD  K  G++   D  
Sbjct: 122 DL-TKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQ 180

Query: 337 RF 338
           + 
Sbjct: 181 KA 182



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 120 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 179

Query: 273 FRNFHK 278
            +   K
Sbjct: 180 QKAEQK 185


>gi|146275|gb|AAB18618.1| IMP dehydrogenase [Escherichia coli]
          Length = 488

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|298714699|emb|CBJ27624.1| myosin 29 [Ectocarpus siliculosus]
          Length = 3170

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)

Query: 222  DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL 280
            +++       LV        A   ++  R   V VVD G  L GI TE D + R   K +
Sbjct: 1679 ELLKLKGEPQLVFADDSARGAGKAIARGR-KAVLVVDNGG-LAGIFTEKDMLNRVLSKGI 1736

Query: 281  N--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLR 337
            N   +SVEDVM  NP  +     +  A+Q + ++    L VVD+     +G+V  +++++
Sbjct: 1737 NPDEVSVEDVMTPNPDTVSSTMTVLEALQEMHENKYLHLPVVDEDSGNVLGVVSVMEIIQ 1796

Query: 338  F 338
             
Sbjct: 1797 A 1797



 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/175 (16%), Positives = 64/175 (36%), Gaps = 9/175 (5%)

Query: 167  ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG-----GKLGTLFVCAS 221
            ++   G + T+S     +IG   +  +   R  +     +         GK       + 
Sbjct: 1816 DATGDGFSDTSSQASMGSIGTRASARVGVGRGKTSPRVAMTPSAASSVRGKEPPKKTDSR 1875

Query: 222  DVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-- 278
             V       PL       +++    +++ R     ++D    L+GII++ D+ R      
Sbjct: 1876 PVSMLKPKPPLCLPSTVSVLEVAKKMADVRTDAAILLDNKGHLEGIISDQDVARRVVANR 1935

Query: 279  -DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             D ++ +V +VM  +P ++         + ++ +     L V+D      G++  
Sbjct: 1936 LDPSSTTVSEVMTPHPTIVHMADSAMECLGIMIEKRFRHLPVIDGEGNVTGLLSI 1990



 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 10/143 (6%)

Query: 199  FSEND---FYVLHPGGKLGTLFVCASDVMHSGDSIPLV---KIGCPLIDAITILSEKRFG 252
            FS  +        PG K G      S+   S               +++  T +S KR  
Sbjct: 2592 FSAEEKMSMRSAKPGAKTGAPAPPRSNKKVSCLKPKRPVIMSSDGSVLEVATEMSLKRTD 2651

Query: 253  CVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
               +  +  ++ GI+T+ D+ R         +   V D+M   P ++  D     A+ L+
Sbjct: 2652 AALLT-KRGRVVGIVTDHDLTRRVIALDMPPDRTPVRDIMTAEPAMVSMDESAMEALGLM 2710

Query: 310  RQHNISVLMVVDDCQKAIGIVHF 332
             Q+    L V+D   K  G++  
Sbjct: 2711 IQNKTRHLPVMDAQGKIGGLLDI 2733



 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 40/116 (34%), Gaps = 3/116 (2%)

Query: 220  ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NF 276
             +           V  G  + +   +++  R     +   G  + GIIT  D  R     
Sbjct: 1492 VTVSKLRPKPAVTVPEGMSVTEVCKVMANARNDAALLTGAGGGMTGIITAIDCIRRVVAV 1551

Query: 277  HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              D N+ +  +VM  NP  +L +     A+ ++   +   L V        GI+  
Sbjct: 1552 SVDPNSTAASEVMTPNPTTVLSEDSAMEALSIMLGRHFRHLPVRTPRGDVTGILDI 1607



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 216  LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
                 +DV+ S D    V+    + +A ++++ ++   + V  E  +L GI T  D+  R
Sbjct: 2810 TNQTLADVLASKDKPEFVRPRHTVREAASVIASQKKAVLVV--EEGELAGIFTPKDMMNR 2867

Query: 275  NFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVH 331
               K LN  T +V  VM  NP        +  A+Q + ++    L VVD+     +G+V 
Sbjct: 2868 VITKKLNPGTTAVFSVMTPNPDGADPSMTVVEALQQMCENRYLHLPVVDERSGAVLGVVD 2927

Query: 332  FLDLLRF 338
             +++++ 
Sbjct: 2928 VMEIVQA 2934



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 234  KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMI 290
            + G  +      +S  +     +V    +L GI+T  D+  R   K  D +   V  VM 
Sbjct: 2455 EEGDSVAACGKAISRSKK--AVLVLRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMT 2512

Query: 291  KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLRF 338
             NP  +     +  A++ + ++    L VVD+     +G+V  ++++  
Sbjct: 2513 PNPDAVPPAMTVIEALREMHENKYLHLPVVDEDSGNVLGVVSVMEIIHA 2561



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 234  KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
             +   +      ++E R     ++ +   +KG++T+ DI R       D +   V  VM 
Sbjct: 2268 SVDLTVAQVAKRMAEIRTDAAILLGQMGDMKGVLTDHDIARKVVGRSLDPSRTPVSSVMT 2327

Query: 291  KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +P  +        A++ + + +   L VV +     G+++ 
Sbjct: 2328 PDPIWVTTTDNAMDALETMLETHSRHLPVVSEEGAVSGMLNI 2369



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 4/76 (5%)

Query: 249  KRFGCVAVVDEGQKLKGIITEGD-IFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVA 305
            K    V V+D   +L GI+T  D + R   K  D +   V  +M  NP  +  +     A
Sbjct: 2092 KGRKAVLVLD-QGRLAGILTPKDVLMRVVAKELDPDRTPVSSIMTPNPDTVPPEMTAVEA 2150

Query: 306  MQLLRQHNISVLMVVD 321
            +  + ++    L VVD
Sbjct: 2151 LGEMHENKYLHLPVVD 2166



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 39/259 (15%), Positives = 71/259 (27%), Gaps = 70/259 (27%)

Query: 146  SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI----------ALLE 195
               K+ +A    ++  L    E        +         GD++A           A+L 
Sbjct: 2417 KNGKNTLAAMTMLLQGLSDGEEDPTLEDILSEQTGEFAEEGDSVAACGKAISRSKKAVLV 2476

Query: 196  SRN------FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
             RN       +  D  +      L       S VM        V     +I+A+  + E 
Sbjct: 2477 LRNGRLAGIVTPKDLLMRVVAKGLDPDATPVSAVMTPNPDA--VPPAMTVIEALREMHEN 2534

Query: 250  RFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNT-----------------------LSV 285
            ++  + VVDE    + G+++  +I      D  +                        S 
Sbjct: 2535 KYLHLPVVDEDSGNVLGVVSVMEIIHATAGDKGSDRWEAFFGDAMDAADDVSDSASMFSA 2594

Query: 286  EDVMI---------------------------KNPKVILEDTLLTVAMQLLRQHNISVLM 318
            E+ M                            K P ++  D  +      +        +
Sbjct: 2595 EEKMSMRSAKPGAKTGAPAPPRSNKKVSCLKPKRPVIMSSDGSVLEVATEMSLKRTDAAL 2654

Query: 319  VVDDCQKAIGIVHFLDLLR 337
            +     + +GIV   DL R
Sbjct: 2655 LT-KRGRVVGIVTDHDLTR 2672


>gi|229175320|ref|ZP_04302835.1| hypothetical protein bcere0006_44000 [Bacillus cereus MM3]
 gi|228608152|gb|EEK65459.1| hypothetical protein bcere0006_44000 [Bacillus cereus MM3]
          Length = 437

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D        +    ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVVKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|188493615|ref|ZP_03000885.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 53638]
 gi|188488814|gb|EDU63917.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 53638]
          Length = 488

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|270264716|ref|ZP_06192981.1| hypothetical protein SOD_i01330 [Serratia odorifera 4Rx13]
 gi|270041399|gb|EFA14498.1| hypothetical protein SOD_i01330 [Serratia odorifera 4Rx13]
          Length = 487

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   + +   F    VV E  +L GIIT  D+   F  DLN   V  VM 
Sbjct: 98  QAVTPSTTLKEVKELTARNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQRMHEKRVEKALVVDDNFHLLGMITVKDFQKA 204


>gi|28896976|ref|NP_796581.1| putative sugar-phosphate nucleotide transferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153839585|ref|ZP_01992252.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|260362367|ref|ZP_05775325.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           K5030]
 gi|260897645|ref|ZP_05906141.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|260899575|ref|ZP_05907970.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|28805184|dbj|BAC58465.1| putative sugar-phosphate nucleotide transferase [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149746892|gb|EDM57880.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ3810]
 gi|308087478|gb|EFO37173.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           Peru-466]
 gi|308108796|gb|EFO46336.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           AQ4037]
 gi|308115132|gb|EFO52672.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus
           K5030]
          Length = 351

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              LVK  C L+DA+ I++++    V VVDE   L G++T+GDI R   ++L  T  +  
Sbjct: 6   KNVLVKPACTLLDALEIINDEALRVVLVVDESDSLLGVVTDGDIRRGLLRNLPLTADIAQ 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM   P     DT     + ++  ++I  + ++D+  K +G+    
Sbjct: 66  VMNTTPYTAAIDTPRDELIAIMESNDILSIPLLDN-GKVVGLETLH 110



 Score = 36.4 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +     L  A++++    + V++VVD+    +G+V   D+ R G++
Sbjct: 10  VKPACTLLDALEIINDEALRVVLVVDESDSLLGVVTDGDI-RRGLL 54


>gi|88703627|ref|ZP_01101343.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
           KT71]
 gi|88702341|gb|EAQ99444.1| Putative nucleotidyltransferase DUF294 [Congregibacter litoralis
           KT71]
          Length = 623

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMI 290
           V     + +A   ++E+R     VV + + L+GI+T+ D+  R   + L++ + V +VM 
Sbjct: 170 VPSTATVREAAMAMAERRVSSAFVVADDE-LQGILTDRDLRTRVLARGLSSEMPVNEVMT 228

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            NP+ I  D  L     ++ Q     L V+++  +  GIV   DL+   
Sbjct: 229 PNPEAIASDETLFATTLMMTQRRFHHLPVLEE-GRLAGIVTTSDLIVAK 276



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +     V  VM ++   +     +  A   + +  +S   VV D +   GI+   DL
Sbjct: 151 EPNAMLAPVSSVMTRDILTVPSTATVREAAMAMAERRVSSAFVVADDE-LQGILTDRDL 208


>gi|307824479|ref|ZP_07654704.1| CBS domain containing membrane protein [Methylobacter tundripaludum
           SV96]
 gi|307734463|gb|EFO05315.1| CBS domain containing membrane protein [Methylobacter tundripaludum
           SV96]
          Length = 158

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 19/124 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V+    +     ++  +R   + VV E  K+ GI+++ D+++      N+          
Sbjct: 14  VEQHDLIDRVFFLIHYERIRHLPVV-EKGKVIGIVSDRDLYKALGPKSNSNAIEAATGTG 72

Query: 283 --------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     V+ +M +    +  DT  + A   +  + I  L VVD   K +GI+   D
Sbjct: 73  ATELHVIPKKVQHIMHRGVITVNPDTYASEAAAKMADNKIGALPVVDKDNKLVGILSSTD 132

Query: 335 LLRF 338
           +LRF
Sbjct: 133 ILRF 136



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G      +           +  V       +A   +++ + G + VVD+  KL GI++  
Sbjct: 72  GATELHVIPKKVQHIMHRGVITVNPDTYASEAAAKMADNKIGALPVVDKDNKLVGILSST 131

Query: 271 DIFRNFHK 278
           DI R F K
Sbjct: 132 DILRFFSK 139



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VED+M      + +  L+     L+    I  L VV+   K IGIV   DL + 
Sbjct: 1   MRVEDLMTSKVFTVEQHDLIDRVFFLIHYERIRHLPVVEK-GKVIGIVSDRDLYKA 55


>gi|114800464|ref|YP_760508.1| inosine-5'-monophosphate dehydrogenase [Hyphomonas neptunium ATCC
           15444]
 gi|114740638|gb|ABI78763.1| inosine-5'-monophosphate dehydrogenase [Hyphomonas neptunium ATCC
           15444]
          Length = 485

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 69/170 (40%), Gaps = 8/170 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ ++        +  +    G++  +    S V+    + 
Sbjct: 39  NIPLLSAAMDTVTEARLAIAMAQAGGIGVIHRNLTIEQQAGEVAMVKKYESGVVM---NP 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +   +     F  + VV++  K+ GI+T  D    F  DLN   V  +M 
Sbjct: 96  ITISPDATLGELREVKKRTGFSGIPVVEKSGKVLGIVTNRDTR--FADDLNE-KVATLMT 152

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +N      D     A +LL +H I  L++VD   + +G++   D+ +  +
Sbjct: 153 RNVVTAQMDMDPAEARRLLHKHRIERLVIVDHDGRCLGLLTVKDMDKAAV 202


>gi|254464558|ref|ZP_05077969.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Rhodobacterales bacterium Y4I]
 gi|206685466|gb|EDZ45948.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Rhodobacterales bacterium Y4I]
          Length = 607

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 4/168 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            A TT   + L +  A   AL+ ++      F    PG ++               +   
Sbjct: 95  SARTTKDTLLLLLPKADFHALMANQPKVAKFFDRRRPGSQVSGSLATTRVEAIMARAPVT 154

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMI 290
              G     A  ++ ++R   V V D G +L+GI+T  D+  +        +  V +VM 
Sbjct: 155 CSGGLTCQGAAQLMRDRRISSVCVTD-GDRLQGILTTRDLTAKILAAGKPISTPVCNVMT 213

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +P  +    + +  + ++ +H I  + VV +  K  GIV   DL RF
Sbjct: 214 PDPLTLAPSAIGSDVLHMMMEHGIGHIPVV-EAGKLAGIVTQTDLTRF 260


>gi|206563771|ref|YP_002234534.1| hypothetical protein BCAM1926 [Burkholderia cenocepacia J2315]
 gi|198039811|emb|CAR55785.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 153

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKSDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLVGLISIGDLVK 127



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLVGLISIGDLVKSVIAD 132


>gi|124002464|ref|ZP_01687317.1| CBS domain pair protein [Microscilla marina ATCC 23134]
 gi|123992293|gb|EAY31661.1| CBS domain pair protein [Microscilla marina ATCC 23134]
          Length = 662

 Score = 86.9 bits (214), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 73/181 (40%), Gaps = 14/181 (7%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +  +L    +          TT+ +  +A        + E +  S  D    HP   L  
Sbjct: 450 SRWILKSYSKLLKESTKEEATTAIVAGMAYNQKTKKPVHEWKLASIQDIADWHPTSLLVE 509

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            F+       S D IP              +  +R   + + +E  +L G+IT   + R+
Sbjct: 510 EFMTTDIFTVSKDEIPEFSADM--------MDWRRIRYLPIENEQGELIGLITSRQLLRH 561

Query: 276 F-----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           F     ++ L+  +++D+MIK+P  I  +  +  A+ ++    I  L VV + +K +GI+
Sbjct: 562 FSTMYKNEKLDYSTIKDLMIKDPLTIAPEATIIEAIDVMNTQKIGCLPVV-NNKKLVGII 620

Query: 331 H 331
            
Sbjct: 621 T 621



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L VE+ M  +   + +D +   +  ++    I  L + ++  + IG++    LLR
Sbjct: 505 SLLVEEFMTTDIFTVSKDEIPEFSADMMDWRRIRYLPIENEQGELIGLITSRQLLR 560



 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 1/37 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           +     +I+AI +++ ++ GC+ VV+  +KL GIITE
Sbjct: 587 IAPEATIIEAIDVMNTQKIGCLPVVN-NKKLVGIITE 622


>gi|83647724|ref|YP_436159.1| signal transduction protein [Hahella chejuensis KCTC 2396]
 gi|83635767|gb|ABC31734.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Hahella chejuensis KCTC 2396]
          Length = 656

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 3/111 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--S 284
                  +    +  A+ I+ E+  G + V D  +K  GI T  D+ R        L   
Sbjct: 197 DRQAVHCEPTLSIRKAVRIMDERGVGSMVVTDANRKPVGIFTLRDLRRFIADPGADLDAP 256

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   M  +P  +  D     A  ++ +H+ + +++ ++  K +G+V   DL
Sbjct: 257 ISSCMNADPISLSPDATAFEAALIMAKHHFAHVLIAEND-KLLGVVSERDL 306



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 21/41 (51%)

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  A++++ +  +  ++V D  +K +GI    DL RF
Sbjct: 205 PTLSIRKAVRIMDERGVGSMVVTDANRKPVGIFTLRDLRRF 245


>gi|220931478|ref|YP_002508386.1| putative signal-transduction protein with CBS domains
           [Halothermothrix orenii H 168]
 gi|219992788|gb|ACL69391.1| putative signal-transduction protein with CBS domains
           [Halothermothrix orenii H 168]
          Length = 141

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 42/105 (40%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMI 290
           +     + DA  ++     G V V D G +  GIIT+ DI            + V  VM 
Sbjct: 14  INPNSSVKDAAQVMRSLNVGSVPVTD-GNRPVGIITDRDITIRSVAQAGNINMPVHQVMT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +      D  +  A Q++    I  L VV +  + +GIV   DL
Sbjct: 73  GDIVYGTPDMSVEEAAQIMASKQIRRLPVV-ENGRLVGIVSLGDL 116



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++D+M  +   I  ++ +  A Q++R  N+  + V D   + +GI+   D+ 
Sbjct: 1   MKLKDIMTSDVTSINPNSSVKDAAQVMRSLNVGSVPVTD-GNRPVGIITDRDIT 53



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%), Gaps = 3/60 (5%)

Query: 215 TLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                 +  +H   +  +V       + +A  I++ K+   + VV E  +L GI++ GD+
Sbjct: 58  AQAGNINMPVHQVMTGDIVYGTPDMSVEEAAQIMASKQIRRLPVV-ENGRLVGIVSLGDL 116


>gi|182411839|ref|YP_001816905.1| signal-transduction protein [Opitutus terrae PB90-1]
 gi|177839053|gb|ACB73305.1| putative signal-transduction protein with CBS domains [Opitutus
           terrae PB90-1]
          Length = 147

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 44/108 (40%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA+  ++  R G + VV E     GI TE D+ R       D     V  VM
Sbjct: 19  VPSNVTVCDAVNEMNRHRIGSI-VVLENSSPIGIFTERDVLRRVVGEGVDPKRTPVNQVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P  I  +T +   M L  + N   L V+    K +G++   D+ R
Sbjct: 78  TARPITITPETTIEQTMTLFAEKNCRHLPVL-VNGKLVGLISIGDISR 124


>gi|42523182|ref|NP_968562.1| mannose-1-phosphate guanyltransferase [Bdellovibrio bacteriovorus
           HD100]
 gi|39575387|emb|CAE79555.1| Mannose-1-phosphate guanyltransferase [Bdellovibrio bacteriovorus
           HD100]
          Length = 350

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 3/98 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
            V +   L  A+ +L         V+D+ +KL G +T+GDI R   K  DL+ L V+ VM
Sbjct: 8   FVSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRALLKCSDLDQL-VKGVM 66

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            KNPK I E       +  +RQ  +  L V++     +
Sbjct: 67  NKNPKSISEGLSRNEIVAKMRQWRVRHLPVLNSAGCVV 104



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 25/43 (58%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D  L  AM++L +++I +  V+DD +K +G +   D+ R 
Sbjct: 9   VSLDDTLRHAMEVLERNSIQICFVLDDNKKLVGALTDGDIRRA 51


>gi|170695385|ref|ZP_02886531.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
 gi|170139785|gb|EDT07967.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
          Length = 281

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 61/163 (37%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L              AV+ +     R+   G G SG     +       G PS  
Sbjct: 100 RTIGTLIQVRNSLSPHSVEAAVDLLANAA-RIEFYGAGGSGIAAQDIQHKFFRLGMPSVA 158

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+I+ +S +G + ++    + A      +IAIT    S +A  
Sbjct: 159 YSDPHTYSMSAALLGPGDVIVTVSNTGRTRDIIEATHSALNRGAKVIAIT-HGSSPLAKL 217

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A I L      ES     +P TS +  LAIGD LA+ +   R 
Sbjct: 218 ASICLFSNVVEESDVF--SPMTSRMSHLAIGDILAVGVALKRG 258


>gi|190570948|ref|YP_001975306.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
 gi|190357220|emb|CAQ54638.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Culex quinquefasciatus Pel]
          Length = 495

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 74/170 (43%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 40  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +A++++ E  +  + VVD  +KL GI+T  D+ R        + V +VM 
Sbjct: 97  ITISPDKTVAEAVSLMREYNYSGIPVVD-QRKLVGILTNRDV-RFIEDQNMNIKVSEVMT 154

Query: 291 KN-PKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E  + +  AM+LL  + I  L+VVD+    IG++   D+ ++
Sbjct: 155 KDKLVTVREQAVNSASAMKLLHANRIEKLLVVDENSCCIGLITVKDIEKY 204


>gi|110668953|ref|YP_658764.1| metalloprotease [Haloquadratum walsbyi DSM 16790]
 gi|109626700|emb|CAJ53167.1| probable metalloprotease/ CBS domain protein [Haloquadratum walsbyi
           DSM 16790]
          Length = 392

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 2/120 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              D+M     + +V+    +   +  +  +R     VVD G  L G++T  D       
Sbjct: 250 TVGDIMTERSDLDVVEQNVSVATLLERMFTERHTGYPVVDNGG-LVGVVTLDDARSVEEV 308

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     V DVM  +   I  D     AMQ +++++I  L V+++ +  +G++   DL+  
Sbjct: 309 EREAYRVSDVMTPDVTTINPDADAMDAMQRMQENDIGRLPVIENTE-LVGLISRSDLMTA 367


>gi|89899448|ref|YP_521919.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89344185|gb|ABD68388.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 140

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 5/101 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHK--DLNTLSVEDVMI 290
                + DA  +++++  G V VV   + L GI TE D +FR   K  D NT  + +VM 
Sbjct: 19  PPETTVSDAARLMADRNVGAVLVV-ADEHLLGIFTERDAVFRVIAKGRDANTTQLTEVMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +PK +        A+ +++++    + VV +  + +GI+ 
Sbjct: 78  VDPKTLEPGKTYGHALLIMQENGFRHVPVV-ENGRPVGIIS 117



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 280 LNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +    ++ +M  K       +T ++ A +L+   N+  ++VV   +  +GI    D
Sbjct: 1   MFDQPIKSIMEQKKFLTAPPETTVSDAARLMADRNVGAVLVV-ADEHLLGIFTERD 55


>gi|332524315|ref|ZP_08400536.1| RpiR family transcriptional regulator [Rubrivivax benzoatilyticus
           JA2]
 gi|332107645|gb|EGJ08869.1| RpiR family transcriptional regulator [Rubrivivax benzoatilyticus
           JA2]
          Length = 319

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 57/168 (33%), Gaps = 5/168 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++L        S     A+  +        R+   G+G SG +           G  
Sbjct: 120 NAVAALLRYRNAAASQAIEDAITALTEAGRHSRRIEFYGVGNSGIVALDAQHKFFRLGVN 179

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT--SENKS 150
           S  +           M+   D  +V+S SG S ++  +   ARR    +I IT      +
Sbjct: 180 SMAISDGHVQVMSATMLGEGDCAVVISNSGRSRDILDVAEIARRKGATVIVITASGSPLA 239

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +A  +   + L  +        +P  S ++ L I D LA  +     
Sbjct: 240 TLALGSPGHVLLAADHPEDADRYSPMVSRLLHLTIVDILATGVALRLG 287


>gi|222102695|ref|YP_002539734.1| transcriptional repressor of rpiB expression; transcriptional
           repressor of ribose catabolism (RpiR/YebK family)
           [Agrobacterium vitis S4]
 gi|221739296|gb|ACM40029.1| transcriptional repressor of rpiB expression; transcriptional
           repressor of ribose catabolism (RpiR/YebK family)
           [Agrobacterium vitis S4]
          Length = 291

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 75/190 (39%), Gaps = 8/190 (4%)

Query: 9   KSVTRKGHSLMK--NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           +  T + H  +   +++++   +        + +LE +L       F  A + I   + R
Sbjct: 83  RQPTTEMHQELSVDDTSLEIVQKVFRT---SIHALEETLAILDMAAFDQAADMIHKARNR 139

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
               G+G S  I   +A      G  +     +        ++   D+ I  S SG++  
Sbjct: 140 -DFYGVGGSAQIARDVAHKFLRIGVRASVFDDSHMMLMSAALLADTDVAIGFSHSGNTIA 198

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   L  AR+     IA+T+   S +A  AD+VL    +        A   + I QL I 
Sbjct: 199 VIEALQLARKNGASTIAVTNYGSSALAQSADVVLCSTAQGSPLMGENA--AARIAQLNIL 256

Query: 187 DALAIALLES 196
           DA+ +A+ + 
Sbjct: 257 DAIFVAVAQR 266


>gi|15605932|ref|NP_213309.1| hypothetical protein aq_438 [Aquifex aeolicus VF5]
 gi|2983115|gb|AAC06720.1| hypothetical protein aq_438 [Aquifex aeolicus VF5]
          Length = 319

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +   +   V     L +   ILS+   G + VV    KL GI+T+ DI +   +      
Sbjct: 199 YMTPNPITVSPNQTLKEVEEILSKHLIGGLPVV-AKGKLVGIVTKSDIQKVPSELREKKR 257

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           V DVM  N   + E+  L   +++     I  L VV      + IGI+   D+ + 
Sbjct: 258 VYDVMSTNLITVTEEESLAEVLRIFSSKGIGRLPVVKHKGSSELIGIITRADIGKA 313



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  L V D M  NP  +  +  L    ++L +H I  L VV    K +GIV   D+ +
Sbjct: 191 LEKLCVRDYMTPNPITVSPNQTLKEVEEILSKHLIGGLPVV-AKGKLVGIVTKSDIQK 247



 Score = 39.1 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKD 279
              ++  V     L + + I S K  G + VV      +L GIIT  DI +   + 
Sbjct: 262 MSTNLITVTEEESLAEVLRIFSSKGIGRLPVVKHKGSSELIGIITRADIGKAIREW 317


>gi|68445529|dbj|BAE03238.1| inosine monophosphate dehydrogenase [unclutured Candidatus
           Nitrosocaldus sp.]
          Length = 191

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 61/129 (47%), Gaps = 5/129 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + +L +     + S   + +V+ G  +  A  ++ E+  G + VVD+  K  GI+TE DI
Sbjct: 38  IMSLLIKRVTEIMSEGPVDVVEKGLNVFYAANVMRERARGSLVVVDD-GKPVGIVTERDI 96

Query: 273 FRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R      +  +   V D+M      +  +  +  A++++ ++ I  L VV++ +  + +
Sbjct: 97  VRRVVAEGRSPSATKVGDIMSTPLISVGPEATVAAAVRIMYENGIRRLPVVENDRIVV-M 155

Query: 330 VHFLDLLRF 338
           +   DL R 
Sbjct: 156 LTVTDLARA 164


>gi|88858306|ref|ZP_01132948.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas tunicata
           D2]
 gi|88819923|gb|EAR29736.1| inositol-5-monophosphate dehydrogenase [Pseudoalteromonas tunicata
           D2]
          Length = 489

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    + ++      
Sbjct: 41  NLPLVSASMDTVTEARLAIALAQEGGLGFIHKNMTIEEQANNVRKVKTYEAGIV---SFP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +   K F    V DE   L GI+T  D+   F   L    V  VM 
Sbjct: 98  VTVTANLTIADTLALAEAKGFSGFPVTDENNTLVGIVTSRDMR--FETKL-EQPVSTVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E T   V + L+ +H I  ++VVDD  K  G++   D  + 
Sbjct: 155 QKADLVTVKEGTERDVILGLMHEHRIEKILVVDDEFKLKGMITVKDYQKA 204



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    S VM     +  VK G      + ++ E R   + VVD+  KLKG+IT  D  +
Sbjct: 144 KLEQPVSTVMTQKADLVTVKEGTERDVILGLMHEHRIEKILVVDDEFKLKGMITVKDYQK 203

Query: 275 NFHK 278
              K
Sbjct: 204 AQDK 207


>gi|296108946|ref|YP_003615895.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433760|gb|ADG12931.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 293

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 4/103 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L +A    +EK      V+ E   L GI+T  DI +N +K      V++VM K+  
Sbjct: 185 PNMSLKEAAEYFAEKNISGAPVM-ENNNLVGILTVRDIIKNINK--IDKKVKEVMKKDII 241

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +D  +  A++++ ++N+  L++VD+  K  GI+   D+L+
Sbjct: 242 TVDKDVKIYDALKIMNKYNVGRLIIVDN-NKVFGIITRTDILK 283



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 280 LNTLSVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  L V D+   NP    +  +  L  A +   + NIS   V+++    +GI+   D+++
Sbjct: 167 IPNLKVSDI--GNPLKYYLTPNMSLKEAAEYFAEKNISGAPVMENNN-LVGILTVRDIIK 223



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
               I  V     + DA+ I+++   G + +VD   K+ GIIT  DI +    +L  
Sbjct: 236 MKKDIITVDKDVKIYDALKIMNKYNVGRLIIVD-NNKVFGIITRTDILKTITGELYQ 291


>gi|212223507|ref|YP_002306743.1| hypothetical protein TON_0361 [Thermococcus onnurineus NA1]
 gi|212008464|gb|ACJ15846.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 391

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/218 (16%), Positives = 75/218 (34%), Gaps = 38/218 (17%)

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+   +   A   +    ++  A +++ +           A     I  L + D +A   
Sbjct: 67  AKVKDVYKTAPVIKPDEDLSKAAKLMIEVDLRSLPVGESKAEIIGVISDLMLLDRIA--- 123

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
                  + +F                         +  +K    +  A+  + +     
Sbjct: 124 -------KEEFGKRK-------------VEEFMTKDVITLKPDDTVAKALAAMRDHSISR 163

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLN---------------TLSVEDVMIKNPKVILE 298
           + +V+E  KL G++T  D+   F K                  +  + +VMI+    I  
Sbjct: 164 IPIVNEEGKLDGLVTLHDLIVRFIKPRFRAQTGELVGEKIPPFSTQLREVMIRGVITIQP 223

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D  +  A+  +  +NI  L++VD+ +K  GI+   DLL
Sbjct: 224 DATVQEAVAKMIDNNIDGLIIVDENEKVKGILTIKDLL 261



 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
              + V     + P++K    L  A  ++ E     + V +   ++ G+I++  +  R  
Sbjct: 64  PTKAKVKDVYKTAPVIKPDEDLSKAAKLMIEVDLRSLPVGESKAEIIGVISDLMLLDRIA 123

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     VE+ M K+   +  D  +  A+  +R H+IS + +V++  K  G+V   DL+
Sbjct: 124 KEEFGKRKVEEFMTKDVITLKPDDTVAKALAAMRDHSISRIPIVNEEGKLDGLVTLHDLI 183


>gi|206889630|ref|YP_002247887.1| putative nucleotidyltransferase family [Thermodesulfovibrio
           yellowstonii DSM 11347]
 gi|206741568|gb|ACI20625.1| putative nucleotidyltransferase family [Thermodesulfovibrio
           yellowstonii DSM 11347]
          Length = 633

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           V     + DA  ++ E     + ++D      GIIT+ D+ R        +   V+++M 
Sbjct: 176 VPENTSIRDAARLMCENSISSLIIMDSQGIPVGIITDKDLRRKVVASARNVDEPVKNIMS 235

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                I        A+  + ++NI  L+V+    K  GI+   D++
Sbjct: 236 YPIIKIDAKDFCFEAVVRMLKYNIHHLLVI-KNGKIEGIITNHDIM 280



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +     K L T  VE++  KN   + E+T +  A +L+ +++IS L+++D     +GI+ 
Sbjct: 152 LTYTVDKLLFTTPVEEIATKNVISVPENTSIRDAARLMCENSISSLIIMDSQGIPVGIIT 211

Query: 332 FLDLLRFGII 341
             DL R  ++
Sbjct: 212 DKDL-RRKVV 220


>gi|226501428|ref|NP_001148069.1| CBS domain containing protein [Zea mays]
 gi|195615614|gb|ACG29637.1| CBS domain containing protein [Zea mays]
 gi|223947611|gb|ACN27889.1| unknown [Zea mays]
          Length = 545

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  ++DA   ++ +R   V + D    L GI+T+ DI  R   + L      +  +M
Sbjct: 69  IPEGTTVLDACRRMAARRVDAVLLTDNQGLLSGIVTDKDIATRVVAEGLRVEQTIMSKIM 128

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  ++ DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 129 TRNPVYVMSDTLAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 172



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +V    P+  A   + E     V VV  G  L+GI T  D + R   ++
Sbjct: 226 STIVTENTKVAIVSPTDPVCVAAQKMREFCVNSV-VVSTGNTLQGIFTSKDILMRVVSQN 284

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           ++     VE VM  NP     +T +   + ++       + V+D   + 
Sbjct: 285 ISPELTLVEKVMTVNPDCATLETTILDTLHIMHDGKFLHIPVIDKDGQI 333


>gi|312795143|ref|YP_004028065.1| transcriptional regulator, RpiR family [Burkholderia rhizoxinica
           HKI 454]
 gi|312166918|emb|CBW73921.1| Transcriptional regulator, RpiR family [Burkholderia rhizoxinica
           HKI 454]
          Length = 338

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     RV   G G SG     +       G PS  
Sbjct: 157 RTIGALLEVRNSLSAHSVETAIELLADAA-RVEFYGAGGSGIAAQDIQHKFFRLGMPSVA 215

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++   ++ A +    +IAIT    S +A  
Sbjct: 216 YTDPHTYAMSAALLGPRDVVVAVSNTGRTRDIIGAVHSALQRDAKVIAIT-HGNSPLARL 274

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A I L      E+     +P TS +  L IGD LA+ +   R 
Sbjct: 275 ATISLLANLTEETDVF--SPMTSRMSHLVIGDILAVGVALRRG 315


>gi|282896159|ref|ZP_06304184.1| PolyA polymerase [Raphidiopsis brookii D9]
 gi|281198959|gb|EFA73835.1| PolyA polymerase [Raphidiopsis brookii D9]
          Length = 914

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A  IL       ++VV+   KL GII+  D+    H       V
Sbjct: 320 MSSPVRTIRPETTITQAQRILLRYGHSGLSVVNSQDKLVGIISRRDLDIALHHGFGHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M  + K I   T L     L+  ++I  L V+ +    +GIV   D+LR
Sbjct: 380 KGYMTTDLKTINPHTELPQIESLMVTYDIGRLPVL-ENGSLVGIVTRTDVLR 430



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+M    + I  +T +T A ++L ++  S L VV+   K +GI+   DL
Sbjct: 315 MARDLMSSPVRTIRPETTITQAQRILLRYGHSGLSVVNSQDKLVGIISRRDL 366



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%), Gaps = 1/67 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F  A    +    +  +     L    +++     G + V+ E   L GI+T  D
Sbjct: 369 ALHHGFGHAPVKGYMTTDLKTINPHTELPQIESLMVTYDIGRLPVL-ENGSLVGIVTRTD 427

Query: 272 IFRNFHK 278
           + R  H+
Sbjct: 428 VLRQLHR 434


>gi|157371831|ref|YP_001479820.1| inosine 5'-monophosphate dehydrogenase [Serratia proteamaculans
           568]
 gi|157323595|gb|ABV42692.1| inosine-5'-monophosphate dehydrogenase [Serratia proteamaculans
           568]
          Length = 487

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEANLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   + +   F    VV E  +L GIIT  D+   F  DLN   V  VM 
Sbjct: 98  QAVTPTTTLKEVKELTARNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDQFHLLGMITVKDFQKA 204


>gi|42519998|ref|NP_965913.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila melanogaster]
 gi|42409735|gb|AAS13847.1| inosine-5'-monophosphate dehydrogenase [Wolbachia endosymbiont of
           Drosophila melanogaster]
          Length = 494

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 72/170 (42%), Gaps = 9/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M        AIA+ +         +  +     ++  +    S ++    + 
Sbjct: 37  NIPLISSAMDTVTESGFAIAIAQHGGIGCIHKNLSIDEQVLEVRRVKKYESWIV---YNP 93

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + +AI+++ E  +  + VVD  +KL GI+T  D  R        + V +VM 
Sbjct: 94  ITISQDKTVAEAISLMREHNYSGIPVVD-QRKLVGILTNRD-MRFIEDQNMNVKVSEVMT 151

Query: 291 KN-PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+    + E       AM+LL ++ I  L+VVD+    IG++   D+ ++
Sbjct: 152 KDKLVTVREQGVNSASAMKLLHENRIEKLLVVDENSCCIGLITVKDIEKY 201


>gi|255534552|ref|YP_003094923.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
           3519-10]
 gi|255340748|gb|ACU06861.1| Inosine-5'-monophosphate dehydrogenase [Flavobacteriaceae bacterium
           3519-10]
          Length = 486

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 15/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  SA M       +AIA+             +H    +         V  S + +  
Sbjct: 44  NAPIVSAAMDTVTEAEMAIAMARVGGIG-----FIHKNMPIEEQAAQVYRVKRSENGMIS 98

Query: 233 VKI----GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       L++A  +++  +   + VVD   KL GIIT  D+    +++  +  VE++
Sbjct: 99  DPVTLSKDHTLMEAKEMMANFKISGLPVVDADNKLIGIITNRDVK---YQENLSAKVEEL 155

Query: 289 MIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+ K+I  D  T L  A Q+L ++ +  L +VD   K +G++   D+
Sbjct: 156 MTKD-KLITSDKATNLEQAKQILLKNRVEKLPIVDSEFKLVGLITIKDI 203


>gi|290961286|ref|YP_003492468.1| hypothetical protein SCAB_69351 [Streptomyces scabiei 87.22]
 gi|260650812|emb|CBG73929.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 157

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 59/136 (43%), Gaps = 6/136 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
               P G        A D+MH       +     L  A  ++ +   G + + D+ ++L 
Sbjct: 4   APRRPSGTGRYHMTTAGDIMH--RGAQWIPAHETLDRAAQLMRQLNVGALPISDQNERLC 61

Query: 265 GIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI+T+ DI         D +T++  ++    P+ I  D  +   ++ ++ H I  L V+ 
Sbjct: 62  GILTDRDIVVGCVALGHDPSTITAGEMAKGTPRWIAADADVAEVLEEMKGHQIRRLPVI- 120

Query: 322 DCQKAIGIVHFLDLLR 337
           + ++ +G++   DL R
Sbjct: 121 ENKRLVGMISEADLAR 136



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            LG      +    +  +   +     + + +  +   +   + V+ E ++L G+I+E D
Sbjct: 75  ALGHDPSTITAGEMAKGTPRWIAADADVAEVLEEMKGHQIRRLPVI-ENKRLVGMISEAD 133

Query: 272 IFRNFHKDLNTLSVEDV 288
           + R+   D     VE V
Sbjct: 134 LARHLSDDQIAAWVESV 150


>gi|332523878|ref|ZP_08400130.1| inosine-5'-monophosphate dehydrogenase [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332315142|gb|EGJ28127.1| inosine-5'-monophosphate dehydrogenase [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 493

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIISAAMDTVTDSRMAIAIARAGGLG-----VIHKNMSIIEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+      D     + 
Sbjct: 100 DPFFLTPNHKVAEAEELMQRYRISGVPIVETMGNRKLVGIITNRDMRFISDYD---APIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T L  A Q+L QH I  L +VDD  +  G++   D+
Sbjct: 157 EHMTSEKLVTAEVGTDLVTAEQILHQHRIEKLPLVDDSGRLSGLITIKDI 206


>gi|229163604|ref|ZP_04291553.1| hypothetical protein bcere0009_43700 [Bacillus cereus R309803]
 gi|228619854|gb|EEK76731.1| hypothetical protein bcere0009_43700 [Bacillus cereus R309803]
          Length = 437

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPDDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D           + ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKEMPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|89097680|ref|ZP_01170568.1| transcriptional regulator (RpiR family) protein [Bacillus sp. NRRL
           B-14911]
 gi|89087539|gb|EAR66652.1| transcriptional regulator (RpiR family) protein [Bacillus sp. NRRL
           B-14911]
          Length = 282

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 3/163 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  +++LE +L+      F  AVE I   + +V   G G SG I          TG    
Sbjct: 103 RSNINTLEDTLKLIRGGAFEMAVEAILQAE-KVEFFGSGGSGIIAQDAYHKFIRTGLTVH 161

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +         ++  D  + +S SG++ ++  +L  A+      I+IT+  K+ +  
Sbjct: 162 ANSDSHLQLMSASQLSDKDTAVFISHSGATKDMIGVLKVAKENGARTISITNFAKTPLTQ 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            ADI L    E           +S I QL+I DAL + ++ +R
Sbjct: 222 QADIALYTVAEETDYRSEAL--SSRIAQLSIIDALYVNVMIAR 262


>gi|254254274|ref|ZP_04947591.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
 gi|124898919|gb|EAY70762.1| hypothetical protein BDAG_03569 [Burkholderia dolosa AUO158]
          Length = 153

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V+    + DAI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYSVRKTDLVYDAIKLMAEKGIGALLVMD-GDDIAGIVTERDYARKVVLQERSSRA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D+  K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDN-GKLIGLISIGDLVK 127



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+                         +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYA--RKVVLQERSSRATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+I+ GD+ ++   D
Sbjct: 113 NGKLIGLISIGDLVKSVIAD 132


>gi|331695746|ref|YP_004331985.1| putative signal transduction protein [Pseudonocardia dioxanivorans
           CB1190]
 gi|326950435|gb|AEA24132.1| putative signal transduction protein with CBS domains
           [Pseudonocardia dioxanivorans CB1190]
          Length = 144

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
            G ++  V     + +A+  L + R G + V D   +++GI++E D+ R   +  N L  
Sbjct: 10  KGRTVHSVVPWATVAEAVERLEKYRIGALLVSDGENRIRGIVSERDVIRELARRGNRLLS 69

Query: 284 -SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +VED+M +N   +     LT AM  + +     L VVD   + +G+V   DL+
Sbjct: 70  CNVEDIMTRNVATVSSTESLTYAMAQMTRGRYRHLPVVD-GGRLVGMVSIGDLV 122



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 285 VEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + DV+    + +        +  A++ L ++ I  L+V D   +  GIV   D++R 
Sbjct: 3   IADVLDTKGRTVHSVVPWATVAEAVERLEKYRIGALLVSDGENRIRGIVSERDVIRE 59



 Score = 36.4 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 13/71 (18%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +  +       ++  V     L  A+  ++  R+  + VVD G +L G+++ GD+ 
Sbjct: 64  GNRLLSCNVEDIMTRNVATVSSTESLTYAMAQMTRGRYRHLPVVD-GGRLVGMVSIGDLV 122

Query: 274 RNFHKDLNTLS 284
            +  +++   +
Sbjct: 123 NHRVREMELQT 133


>gi|295699415|ref|YP_003607308.1| signal transduction protein with CBS domains [Burkholderia sp.
           CCGE1002]
 gi|295438628|gb|ADG17797.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1002]
          Length = 147

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSV 285
            +  +     + +AI +++EK  G + V D G  + GI+TE D  R      +      V
Sbjct: 16  EVYTIGADDSVYEAIRLMAEKGIGALVVTD-GDSIAGIVTERDYARKIVLMDRSSKATPV 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D+M K  + +  D      M L+ +  +  L V+ +  + IG+V   DL++
Sbjct: 75  RDIMSKAVRFVRPDQTTEDCMALMTERRMRHLPVI-ENGRLIGMVSIGDLVK 125



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M    ++  V+      D + +++E+R   + V+ E
Sbjct: 54  TERDYARKIVLMDRSSKATPVRDIM--SKAVRFVRPDQTTEDCMALMTERRMRHLPVI-E 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ ++ 
Sbjct: 111 NGRLIGMVSIGDLVKDI 127


>gi|52082172|ref|YP_080963.1| CBS domain-containing protein [Bacillus licheniformis ATCC 14580]
 gi|52787563|ref|YP_093392.1| hypothetical protein BLi03885 [Bacillus licheniformis ATCC 14580]
 gi|319648048|ref|ZP_08002265.1| hypothetical protein HMPREF1012_03304 [Bacillus sp. BT1B_CT2]
 gi|52005383|gb|AAU25325.1| CBS domain protein [Bacillus licheniformis ATCC 14580]
 gi|52350065|gb|AAU42699.1| conserved hypothetical protein [Bacillus licheniformis ATCC 14580]
 gi|317389683|gb|EFV70493.1| hypothetical protein HMPREF1012_03304 [Bacillus sp. BT1B_CT2]
          Length = 135

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
            +   P+ +    + +   G + V  E  KL GI+++ DI  R   ++    +  D+M  
Sbjct: 14  CEPSAPIAEIAGKMRDYNVGSIPVC-ENGKLTGIVSDRDIVIRCVAENETDAAARDIMST 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  D     A  L+ +H I  L +V+D  + +GIV   DL
Sbjct: 73  QMVTGRPDMSAEEAGDLMAEHQIRRLPIVEDD-RLVGIVALGDL 115



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++D+M  N +       +      +R +N+  + V  +  K  GIV   D++
Sbjct: 1   MKLKDIMTTNAECCEPSAPIAEIAGKMRDYNVGSIPVC-ENGKLTGIVSDRDIV 53


>gi|15616138|ref|NP_244443.1| transcriptional regulator (hex regulon repressor) [Bacillus
           halodurans C-125]
 gi|10176200|dbj|BAB07295.1| transcriptional regulator (hex regulon repressor) [Bacillus
           halodurans C-125]
          Length = 284

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 66/160 (41%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L+ + +      F  AVE++   K ++   G+G S              G  S     
Sbjct: 109 MALDMATKAMNEQAFTEAVEQMVKAK-KIAFFGVGGSFTSCIDGQYKFMRLGFHSLASGD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                  + M+   D++I +S SG++ E+  I  YA+  ++ LI IT+ ++S +   A +
Sbjct: 168 YHQMIPFITMMDEQDVVICMSTSGNTKEVLDIADYAKERNVKLIGITASSRSALTRKAAV 227

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            L +P        G     S   QL + DAL +++     
Sbjct: 228 SLLIPDIEVQQRIGSI--ASRTSQLNVIDALYVSVFHRIG 265


>gi|295109331|emb|CBL23284.1| 3-hexulose-6-phosphate isomerase [Ruminococcus obeum A2-162]
          Length = 185

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 41/191 (21%), Positives = 80/191 (41%), Gaps = 19/191 (9%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  L+SI+ E   L+  E  +  +   +F  A+ K      R+ + G G+SG +    A+
Sbjct: 3   ETILKSILQE---LTENEKRVSQDEMEKFADAILK----ADRIFVAGAGRSGFVARAFAN 55

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G   FFV            I   DL+++ S SG +  L  +   A++    +I +
Sbjct: 56  RLMHMGLTVFFVGEPTTP-----AIKAGDLLVIGSGSGETGSLVVMAQKAKKIGASVITV 110

Query: 145 TSENKSVVACHADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESR 197
           T   ++ +   ++  + +P        E     + P  +A  Q+     DA+ + L++  
Sbjct: 111 TIHPEASIGKLSEAWICIPGATPKSSLEDTVKSVQPMGNAFEQMTWLVYDAVIMILMKKT 170

Query: 198 NFSENDFYVLH 208
             +E + + LH
Sbjct: 171 GRTEEEMFKLH 181


>gi|317049126|ref|YP_004116774.1| inosine-5'-monophosphate dehydrogenase [Pantoea sp. At-9b]
 gi|316950743|gb|ADU70218.1| inosine-5'-monophosphate dehydrogenase [Pantoea sp. At-9b]
          Length = 488

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQADEVRKVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL +  V  VM 
Sbjct: 98  QTVLPTTTLAEVKELTERNGFAGYPVVNADNELVGIITGRDVR--FVTDL-SQPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     + +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEARDIVLQKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|256828180|ref|YP_003156908.1| nucleotidyl transferase [Desulfomicrobium baculatum DSM 4028]
 gi|256577356|gb|ACU88492.1| Nucleotidyl transferase [Desulfomicrobium baculatum DSM 4028]
          Length = 355

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 1/108 (0%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDV 288
             L+ I   + DAI  L+      V VVDE  KL G +T+GDI R   + L+  + +E +
Sbjct: 11  SALLSINSTIQDAIQSLNASTLQIVMVVDEHGKLLGTVTDGDIRRGLLRGLDLRTGIEQI 70

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  NP V   +    + + L+R + +  + VVD   K +G+  + D++
Sbjct: 71  LFTNPLVAPPEMSREMILHLMRVNRLLQMPVVDGQHKVVGLHLWNDII 118


>gi|332974885|gb|EGK11798.1| acetoin utilization protein AcuB [Desmospora sp. 8437]
          Length = 216

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 12/128 (9%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-- 275
           +   ++MH       V     + DAI +L   +   + ++D    L G++T+ D+     
Sbjct: 1   MLVEEIMHRNIHS--VTPSTSIGDAIHLLKRHQIRHLPILDGQN-LVGLVTDRDLRGASP 57

Query: 276 ------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                   +DL    V +VMI+          +  A +LL +H I  L V+   +K +GI
Sbjct: 58  SSLDSGGLRDLLHRPVSEVMIRQVITAHPLDFVEDAARLLYEHRIGCLPVL-QGEKLVGI 116

Query: 330 VHFLDLLR 337
           +   D+LR
Sbjct: 117 LTETDILR 124



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + DA  +L E R GC+ V+ +G+KL GI+TE DI R  
Sbjct: 90  VEDAARLLYEHRIGCLPVL-QGEKLVGILTETDILRRL 126


>gi|313898185|ref|ZP_07831723.1| CBS domain protein [Clostridium sp. HGF2]
 gi|312956949|gb|EFR38579.1| CBS domain protein [Clostridium sp. HGF2]
          Length = 215

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                   + +   + D + I+SEK    + V+  G+KL G++TEG I +          
Sbjct: 6   RMTKHPICIDVNSKISDVVDIMSEKELHRIPVI-SGKKLVGLVTEGMISKKGASKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+  SV+ +MI++   I ED  L  A  L+ +H+I  L VV+D  + +GI+  
Sbjct: 65  IYELNYLLSKTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTS 124

Query: 333 LDLLRF 338
            D+L  
Sbjct: 125 NDVLSA 130



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             S        +  +     L DA  ++ +   GC+ VV++  ++ GI+T  D+   F
Sbjct: 74  KTSVDAIMIRDVITIHEDRFLEDAALLMYKHDIGCLPVVNDANEVVGILTSNDVLSAF 131


>gi|322373987|ref|ZP_08048521.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. C150]
 gi|321276953|gb|EFX54024.1| inosine-5'-monophosphate dehydrogenase [Streptococcus sp. C150]
          Length = 493

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 26/196 (13%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLQTKLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++   R   V +V+  +
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPENKVAEAEELMQRYRISGVPIVETLD 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            +KL GIIT  D+   F  D +TL  E +  +        T L  A  +L +H I  L +
Sbjct: 133 NRKLVGIITNRDMR--FISDYDTLISEHMTSEKLITAPVGTDLETAESILHEHRIEKLPL 190

Query: 320 VDDCQKAIGIVHFLDL 335
           VDD  +  G++   D+
Sbjct: 191 VDDKGRLSGLITIKDI 206


>gi|266623204|ref|ZP_06116139.1| inosine-5'-monophosphate dehydrogenase [Clostridium hathewayi DSM
           13479]
 gi|288865021|gb|EFC97319.1| inosine-5'-monophosphate dehydrogenase [Clostridium hathewayi DSM
           13479]
          Length = 484

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFSR-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   +T A ++L +  +  L +VDD     G++   D+
Sbjct: 152 MTSRNLVTAREGITMTEAKKILAKARVEKLPIVDDDFNLKGLITIKDI 199


>gi|261345937|ref|ZP_05973581.1| inosine-5'-monophosphate dehydrogenase [Providencia rustigianii DSM
           4541]
 gi|282566022|gb|EFB71557.1| inosine-5'-monophosphate dehydrogenase [Providencia rustigianii DSM
           4541]
          Length = 488

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 61/182 (33%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  +      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTAKIRLNIPMLSAAMDTVTESDLAIALAQEGGIGFIHKNMSIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   +     F    VV +   L GIIT  D+      
Sbjct: 89  HESGVV---TDPVTVTPDTTIREVQEMAQRNGFAGYPVVTKDNSLVGIITGRDVRFVTDP 145

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D     V  VM        + E     V +Q + +H +   +V+DD    +G++   D  
Sbjct: 146 D---QPVTAVMTPKERLVTVKEGEAREVVLQKMHEHRVEKALVIDDNFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|125624236|ref|YP_001032719.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124493044|emb|CAL98007.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300071015|gb|ADJ60415.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 283

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 39/152 (25%), Positives = 63/152 (41%), Gaps = 3/152 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +   AV  I   +  + + GIG S  +   +    +  G   FF+  A      L + 
Sbjct: 117 DDEIMAAVALIDEAES-IFVFGIGASSMVAQDIFQKFSRIGKQVFFIQDAHLFVSSLSIS 175

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            R  + I +S  G + E+  +    R   IP+IAITS  +S +   +D +L      E  
Sbjct: 176 DRKTIFIGISMKGETKEVIELARVVRGMEIPIIAITSREESTLGQMSDYILH-SVSGEDY 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
               A T S + QL + D L   +  S +F+E
Sbjct: 235 QMRTAATMSLMAQLYVVDILFY-MFVSEHFTE 265


>gi|83815677|ref|YP_445720.1| CBS domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83757071|gb|ABC45184.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
          Length = 605

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G   T     +   +       V     +     ++  ++   V V DE  +L G+++  
Sbjct: 444 GYTPTGMQETNVEAYMTTDPFTVHEKESIEFVARLMDWQKIRHVLVEDEEHRLVGLVSHR 503

Query: 271 DIFRNFHKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + R+  +        + V ++M+++P  +  D     A++L+R+H I  L VV +  + 
Sbjct: 504 TLLRHMAERTEQPEGGVPVGEIMVEDPISVSPDRPTLEAVELMREHEIGALPVVRE-NRL 562

Query: 327 IGIVHFLDLLRF 338
           +GI+   D ++ 
Sbjct: 563 VGIITEQDFIQI 574


>gi|149392803|gb|ABR26204.1| cbs domain protein [Oryza sativa Indica Group]
          Length = 143

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 11  WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 70

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 71  DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 123



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  + +   + ++     +E D+          +      D+M   + +  
Sbjct: 22  VKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENQLIT 81

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    ++ A+ +++EKR   + V+D    + G+++ GDI R  
Sbjct: 82  VKPDTRVLQAMQLMTEKRIRHIPVIDGTG-MVGMVSIGDIVRAV 124


>gi|154687543|ref|YP_001422704.1| RpiR family transcriptional regulator [Bacillus amyloliquefaciens
           FZB42]
 gi|154353394|gb|ABS75473.1| putative transcriptional regulator, RpiR family [Bacillus
           amyloliquefaciens FZB42]
          Length = 285

 Score = 86.5 bits (213), Expect = 5e-15,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 72/198 (36%), Gaps = 6/198 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +       +   +  H  M  +  ++  +R +   +  +S L  +           AVE 
Sbjct: 73  IALAQEIVQEPVQHIHEEMSPDDDIEVIIRKVF--RTNISGLTDTFHLIDPADVEKAVEM 130

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I     R+   G G SG I +        TG        +       G++  D  +I +S
Sbjct: 131 IHRAD-RIEFYGNGGSGLIATDAYHKFMRTGINCIAHTDSHFQAMSAGLLGPDSAVIGIS 189

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SGS+ ++   +  A+      I ITS  KS +   +D+VL       +        ++ 
Sbjct: 190 HSGSNKDVLDAVKTAKSLGAGTIGITSYQKSPLTQISDVVLYTSTRETAFRTEA--MSAR 247

Query: 180 IMQLAIGDALAIALLESR 197
           + QL++ D L  A    R
Sbjct: 248 LAQLSVIDTLYFATARLR 265


>gi|322421068|ref|YP_004200291.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M18]
 gi|320127455|gb|ADW15015.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M18]
          Length = 489

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 9/178 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L     +      P  SA M        AI +       F   +  +     ++  +  
Sbjct: 30  DLSTRLTNNIQLNIPLVSAAMDTVTEARAAICMAREGGIGFIHKNLTIAEQAMEVDKVKK 89

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S ++    ++   +    + +A+ ++++ R   V +     KL GI+T  D+   F  
Sbjct: 90  SESGMIVDPITM---RPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLR--FET 144

Query: 279 DLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DL  L + D M K N   +   T L  A + L+   +  L+VVD+ +   G++   D+
Sbjct: 145 DL-DLPISDRMTKRNLVTVPVGTTLEQAKEHLKHTRVEKLLVVDEEKNLKGLITIKDI 201


>gi|304391242|ref|ZP_07373186.1| inosine-5'-monophosphate dehydrogenase [Ahrensia sp. R2A130]
 gi|303296598|gb|EFL90954.1| inosine-5'-monophosphate dehydrogenase [Ahrensia sp. R2A130]
          Length = 499

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +  +
Sbjct: 46  NLPILSAAMDTVTESRLAIAMAQAGGMGIIH-RNLTPIEQAEEVRQVKKFESGMVVNPLV 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ-------KLKGIITEGDIFRNFHKDLNTLSV 285
           +     L DA+ +++  R   + VV+ G        +L GI+T  D+      D  +  +
Sbjct: 105 IGPEATLEDALALMATHRISGIPVVENGGTGGHKTGRLVGILTNRDVRFA---DDPSQHI 161

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + +   + E      A +LL QH I  L+VVD      G++   D+
Sbjct: 162 YELMTREDLVTVREGVSQEDAKKLLHQHRIEKLLVVDKKGNCTGLITVKDM 212


>gi|295401817|ref|ZP_06811782.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312112205|ref|YP_003990521.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294976184|gb|EFG51797.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311217306|gb|ADP75910.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 148

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 5/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             ++  V     + +A  I+S+K  G + V  E  ++KG+IT+ DI 
Sbjct: 1   MTNNSGNKVQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPV-AENGQVKGMITDRDIT 59

Query: 274 ---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KD  +  V +VM         D  +  A  ++ Q+ +  L +V +  +  GIV
Sbjct: 60  LRTSAQGKDPASTPVSEVMTNRVVTGTPDMSVQEAANVMAQNQVRRLPIV-ENNQLQGIV 118

Query: 331 HFLDL 335
              D+
Sbjct: 119 ALGDI 123



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+DVM KN   +  +  +  A Q++ Q NI  L V  +  +  G++   D+ 
Sbjct: 8   KVQDVMTKNVATVSPNQTVQEAAQIMSQKNIGALPVA-ENGQVKGMITDRDIT 59


>gi|147677571|ref|YP_001211786.1| hypothetical protein PTH_1236 [Pelotomaculum thermopropionicum SI]
 gi|146273668|dbj|BAF59417.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 873

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +  +     + +A  ++       + VV +G+++ G+I+  D+ +  H  L    V+  
Sbjct: 317 PVKTITPETVIEEAGMVMLRYGHTGLPVV-KGEQVLGVISRRDVEKALHHGLGHAPVKGF 375

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  N      DT ++   +L+ +H+I  L V+    K +GIV   DLLR
Sbjct: 376 MSTNLITAEPDTPVSAVRELMVRHDIGRLPVL-KEGKLVGIVSRTDLLR 423



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/245 (12%), Positives = 74/245 (30%), Gaps = 17/245 (6%)

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           +   EA+   LG+      +I    SG++      + Y       L  +    +  +   
Sbjct: 133 ITPMEATMLSLGIYEDTGSLIF---SGTTARDAEAVAYLLAQGANLAVVADFLERPLTEE 189

Query: 156 ADIVL--TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
              +L   L        +G+    +          L +   +   F+  D          
Sbjct: 190 QRALLKTLLMSAERFEINGIKFLVAKGNVDEYVGGLDLLTHKLAGFAHLD---------- 239

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +F                     + + + +         A     +   G +TE  + 
Sbjct: 240 -AVFTVVEMDDRVHIVARSSVPEVSVKEILAVFGGGGHPAAASAVVKKADAGQVTEQLLK 298

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               K     +  ++M    K I  +T++  A  ++ ++  + L VV   ++ +G++   
Sbjct: 299 AIRSKARPPATAAEIMSCPVKTITPETVIEEAGMVMLRYGHTGLPVV-KGEQVLGVISRR 357

Query: 334 DLLRF 338
           D+ + 
Sbjct: 358 DVEKA 362



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   P+     ++     G + V+ +  KL GI++  D+ R  H D+ +
Sbjct: 384 EPDTPVSAVRELMVRHDIGRLPVL-KEGKLVGIVSRTDLLRTLHGDVQS 431


>gi|118479755|ref|YP_896906.1| CBS domain-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196047494|ref|ZP_03114705.1| thioesterase family protein [Bacillus cereus 03BB108]
 gi|225866589|ref|YP_002751967.1| thioesterase family protein [Bacillus cereus 03BB102]
 gi|229186867|ref|ZP_04314022.1| hypothetical protein bcere0004_44080 [Bacillus cereus BGSC 6E1]
 gi|118418980|gb|ABK87399.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
 gi|196021709|gb|EDX60405.1| thioesterase family protein [Bacillus cereus 03BB108]
 gi|225786683|gb|ACO26900.1| thioesterase family protein [Bacillus cereus 03BB102]
 gi|228596604|gb|EEK54269.1| hypothetical protein bcere0004_44080 [Bacillus cereus BGSC 6E1]
          Length = 437

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPMEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|114704331|ref|ZP_01437239.1| putative inosine-5`-monophosphate dehydrogenase protein
           [Fulvimarina pelagi HTCC2506]
 gi|114539116|gb|EAU42236.1| putative inosine-5`-monophosphate dehydrogenase protein
           [Fulvimarina pelagi HTCC2506]
          Length = 176

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
                + +A+  +S++  G V VV   +K++G++TE D+ +      KD  T  + D+M 
Sbjct: 19  SADTSVAEAVAEMSKRDIGSVVVVGPDEKVEGLVTERDVMKRLVNQGKDPKTTQLADIMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  ++   D  L   ++++       L V+D   + + I+   D +
Sbjct: 79  RELRMARADDDLLDWLRIMSNERFRRLPVIDADNRIVAIMTQGDFV 124



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             P     DT +  A+  + + +I  ++VV   +K  G+V   D+++
Sbjct: 13  PKPVTFSADTSVAEAVAEMSKRDIGSVVVVGPDEKVEGLVTERDVMK 59



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               + + +    L+D + I+S +RF  + V+D   ++  I+T+GD
Sbjct: 77  MTRELRMARADDDLLDWLRIMSNERFRRLPVIDADNRIVAIMTQGD 122


>gi|320159155|ref|YP_004191533.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
 gi|319934467|gb|ADV89330.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
          Length = 621

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K        + V  + ++I +V++   + D    +  K+    AVV +G  + G++T+ 
Sbjct: 147 QKEEKGLFFRTVVEIASENIAIVQVTDSIRDVALAMCGKQRSSCAVVMDGNDIVGLVTDR 206

Query: 271 DIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           D+  +     KD++   +E VM  NP +I  D  +  A+ L+ Q+NI  L VV +  K  
Sbjct: 207 DMTASVVAKEKDVSE-RIESVMTLNPVLIESDAKVIQAISLMLQYNIRCLPVV-NHGKVA 264

Query: 328 GIVHFLDLL 336
           G++    L+
Sbjct: 265 GLLTTTHLV 273


>gi|261344416|ref|ZP_05972060.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
 gi|282567319|gb|EFB72854.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
          Length = 286

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 48/183 (26%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSF------------QFHCAVEKIKAIKGRVVITGIGK 74
           AL + IA+   L  +   L  E +             QF   VE I     RV I GIG 
Sbjct: 87  ALHNRIAQTDSLMVVAQKLALEKNNSITETTKRIDFNQFEKIVE-ILDSAQRVQIVGIGG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IV+S+SG   ++       
Sbjct: 146 SGLTAKDLSYKLQKIGITTLVEPDHHVQIAAALTLTPKDVQIVISFSGKRKDMLTAANIG 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
                 +IAIT    S +A  +D VL    E        +  +S   Q  + D L +ALL
Sbjct: 206 HNNGACVIAITRSKDSPLAQLSDYVLESMAEENEWR--SSSISSRTAQNTLTDLLFMALL 263

Query: 195 ESR 197
           + R
Sbjct: 264 QKR 266


>gi|170739292|ref|YP_001767947.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium sp. 4-46]
 gi|168193566|gb|ACA15513.1| inosine-5'-monophosphate dehydrogenase [Methylobacterium sp. 4-46]
          Length = 497

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 63/169 (37%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  ++ M       +AIA+ ++          L P  +   +            +   
Sbjct: 45  NLPIIASAMDTVTEARMAIAMAQNGGLGVIH-RNLEPHEQAEQVRQVKKYESGMVLNPIT 103

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-----QKLKGIITEGDIFRNFHKDLNTLSVED 287
           +     L DA  ++ +     + VV+ G      KL GI+T  D          +  + +
Sbjct: 104 IHPDETLADAHQLMRQNGISGIPVVERGPNGSKGKLVGILTNRDTRFATD---TSQPISE 160

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M ++    + E      A +LL Q  I  L+VVDD  + IG++   D+
Sbjct: 161 LMTRDRLITVREGVTQDEAKRLLHQFRIEKLLVVDDHYRCIGLITVKDI 209


>gi|62181079|ref|YP_217496.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|62128712|gb|AAX66415.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322715564|gb|EFZ07135.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 550

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 59  EILPMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMD 112

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    S V+        V     L 
Sbjct: 113 TVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLH 169

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILE 298
           +   +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E
Sbjct: 170 EVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVRE 226

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 227 GEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 266


>gi|85374246|ref|YP_458308.1| IMP dehydrogenase [Erythrobacter litoralis HTCC2594]
 gi|84787329|gb|ABC63511.1| IMP dehydrogenase [Erythrobacter litoralis HTCC2594]
          Length = 508

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 66/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          VLH   K+         V      + +
Sbjct: 63  NIPVISAAMDTVTEADMAIAMAQMGGIG-----VLHRNLKIKEQVAAVRAVKRFESGMVV 117

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L  A  I+ + +   + V D+G KL GI+T  D+    +       V ++
Sbjct: 118 NPITISPEATLGQAQAIMDQHQISGIPVTDKGGKLVGILTNRDVRFAENPG---QPVREL 174

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +    +   T    A +LL Q  I  L+VVDD  + IG++   D+ + 
Sbjct: 175 MTTDDLATVPLGTGENEARRLLHQRRIEKLVVVDDAYRCIGLITVKDIEKA 225


>gi|331269292|ref|YP_004395784.1| nucleotidyl transferase [Clostridium botulinum BKT015925]
 gi|329125842|gb|AEB75787.1| nucleotidyl transferase [Clostridium botulinum BKT015925]
          Length = 353

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 49/96 (51%), Gaps = 1/96 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI 296
            L+ A+ ++ +   G V VVD+  KL G IT+GDI R     L+  S + +VM KNP  +
Sbjct: 14  TLLKALDVIDKAAKGIVYVVDDNMKLLGSITDGDIRRALINKLSLQSGIIEVMNKNPIRV 73

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            E+       +++ ++ I  L +VD   K +  +  
Sbjct: 74  EENVDRIEQKKIMIKNAIRELPIVDKDNKLVDTISL 109


>gi|260577402|ref|ZP_05845370.1| transcriptional regulator, RpiR family [Rhodobacter sp. SW2]
 gi|259020379|gb|EEW23707.1| transcriptional regulator, RpiR family [Rhodobacter sp. SW2]
          Length = 284

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 8/194 (4%)

Query: 5   FSHFKSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
             +++S T   HS +  +++  +   +      + L    + L  +    F  A + +  
Sbjct: 75  VDYYRSDTAALHSEISAEDTAGEIVQKVFRTAMQALEETFAILDLQ---AFERAADYLHR 131

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + R    G+G S  I   ++      G  S     A        ++  +D+ +  S SG
Sbjct: 132 ARQR-DFYGLGGSAQIARDVSHKFLRIGLRSSVFDDAHMMMMSASLLGPEDVAVAFSHSG 190

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           S+  +   +  ARR     IA+T+   S VA   D+VL       S   G   T   I Q
Sbjct: 191 STSAVIDAVELARRNGARTIAVTNYPDSPVARIVDVVLC-STAQNSPLLGENATAR-IAQ 248

Query: 183 LAIGDALAIALLES 196
           L + DAL +A+ + 
Sbjct: 249 LNLLDALFVAIAQR 262


>gi|157376234|ref|YP_001474834.1| mannose-1-phosphate guanyltransferase [Shewanella sediminis
           HAW-EB3]
 gi|157318608|gb|ABV37706.1| mannose-1-phosphate guanyltransferase [Shewanella sediminis
           HAW-EB3]
          Length = 352

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 2/102 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     L DA+ +++ +      V D  + L G+IT+GDI R    +L+    V +VM +
Sbjct: 10  ISPEKTLRDALELINSQALQVALVTDHDKHLLGVITDGDIRRGLLNNLSLDALVTEVMNR 69

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           NP+     T     +QL++QH+I  + +V      +G+    
Sbjct: 70  NPRTASPSTSKKKLLQLMQQHSILSIPLV-KDHILVGLETLK 110



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             I  +  L  A++L+    + V +V D  +  +G++   D+ R G++
Sbjct: 8   VTISPEKTLRDALELINSQALQVALVTDHDKHLLGVITDGDI-RRGLL 54


>gi|117624735|ref|YP_853648.1| inositol-5-monophosphate dehydrogenase [Escherichia coli APEC O1]
 gi|115513859|gb|ABJ01934.1| inositol-5-monophosphate dehydrogenase [Escherichia coli APEC O1]
          Length = 511

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/219 (20%), Positives = 75/219 (34%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 15  LTTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 74

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 75  VTEARLAIALAQEGGIGFIHKNMSIECQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 131

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DL +  V   M        + E 
Sbjct: 132 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDL-SQPVSVYMTPKERLVTVREG 188

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 189 EAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 227


>gi|326387632|ref|ZP_08209238.1| inosine-5'-monophosphate dehydrogenase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326207678|gb|EGD58489.1| inosine-5'-monophosphate dehydrogenase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 489

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 66/166 (39%), Gaps = 9/166 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + +         +  V+     +  +    S ++    + 
Sbjct: 43  NIPVLSSAMDTVTEADMAIVMAQLGGIGVLHRNLTVVEQCAAVRAVKRFESGMV---VNP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +A  ++   +   + VV+   KL GI+T  D+      D  +  V ++M 
Sbjct: 100 ITIAPDATLGEAQAVMRSHKISGIPVVEASGKLVGILTNRDVRFA---DNASQPVRELMT 156

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +N   +   T    A +LL Q  I  L+VVD+  + IG++   D+
Sbjct: 157 QENLATVKLGTSGDDARRLLHQRRIEKLLVVDEAYRCIGLITVKDI 202


>gi|241760303|ref|ZP_04758398.1| HTH-type transcriptional regulator HexR [Neisseria flavescens
           SK114]
 gi|241319181|gb|EER55659.1| HTH-type transcriptional regulator HexR [Neisseria flavescens
           SK114]
          Length = 282

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 45/185 (24%), Positives = 75/185 (40%), Gaps = 14/185 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              S +    +  A  S++ E+R L   ES L+  ++         I     RV   G+G
Sbjct: 88  DNMSSVVEKVLGNAAASLLGERRFLK--ESELENAIA---------ILMHARRVEFYGVG 136

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG +           G  +              ++T  D+++ +S +GSS EL      
Sbjct: 137 NSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLTEQDVLVAISNTGSSIELLDAASI 196

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +IA+T    S +A  AD VL++  +  +  +   P  S ++QLA+ D LAI L
Sbjct: 197 AKENGAAVIALTRN-DSPLAQMADCVLSIATQENAELY--TPMVSRLLQLAVIDILAIGL 253

Query: 194 LESRN 198
                
Sbjct: 254 ALRLG 258


>gi|149392473|gb|ABR26039.1| cbs domain protein [Oryza sativa Indica Group]
          Length = 141

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 9   WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 68

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 69  DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 121



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  VK    ++ A+ +++EKR   + V+D 
Sbjct: 47  TERDYLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDG 106

Query: 260 GQKLKGIITEGDIFRNF 276
              + G+++ GDI R  
Sbjct: 107 TG-MVGMVSIGDIVRAV 122


>gi|146319837|ref|YP_001199549.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis 05ZYH33]
 gi|146322028|ref|YP_001201739.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis 98HAH33]
 gi|253752813|ref|YP_003025954.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis SC84]
 gi|253754638|ref|YP_003027779.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis P1/7]
 gi|253756571|ref|YP_003029711.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis BM407]
 gi|145690643|gb|ABP91149.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis 05ZYH33]
 gi|145692834|gb|ABP93339.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis 98HAH33]
 gi|251817102|emb|CAZ52754.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis SC84]
 gi|251819035|emb|CAZ56882.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis BM407]
 gi|251820884|emb|CAR47650.1| inosine-5'-monophosphate dehydrogenase [Streptococcus suis P1/7]
 gi|292559433|gb|ADE32434.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus suis GZ1]
 gi|319759229|gb|ADV71171.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis JS14]
          Length = 493

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NLPIISAAMDTVTDSKMAIAMARAGGLG-----VIHKNMSIAEQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +++  R   V +V+  E +KL GIIT  D+         +  + 
Sbjct: 100 DPFFLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISD---YSQPIS 156

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +  V     T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 157 TNMTSDELVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDI 206


>gi|330833791|ref|YP_004402616.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis ST3]
 gi|329308014|gb|AEB82430.1| inosine 5'-monophosphate dehydrogenase [Streptococcus suis ST3]
          Length = 472

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NLPIISAAMDTVTDSKMAIAMARAGGLG-----VIHKNMSIAEQADEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +++  R   V +V+  E +KL GIIT  D+         +  + 
Sbjct: 100 DPFFLTPEHTIAEAEKLMATYRISGVPIVETLENRKLVGIITNRDMRFISD---YSQPIS 156

Query: 287 DVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             M  +  V     T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 157 TNMTSDALVTAPVGTDLATAEAILHKHRIEKLPLVDENGRLSGLITIKDI 206


>gi|257057548|ref|YP_003135380.1| transcriptional regulator, RpiR family [Saccharomonospora viridis
           DSM 43017]
 gi|256587420|gb|ACU98553.1| transcriptional regulator, RpiR family [Saccharomonospora viridis
           DSM 43017]
          Length = 333

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 64/155 (41%), Gaps = 2/155 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
                +L       V ++ A   RV + G+G S  + + L   L   G  SF        
Sbjct: 147 EETAEQLDIAELTRVTELLAEATRVDVYGVGASAFVAADLQQKLHRIGRVSFAWSDTHIM 206

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                +++  D+ + +S SG++ +    L  A+      +AIT+  +S +A  AD VLT 
Sbjct: 207 LTSAAVLSEGDVAVAISHSGATTDTVEALRVAKEHGATTVAITNFPRSPIASVADHVLTT 266

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
                +   G   T S I QL + D L I + + R
Sbjct: 267 AARETTFRSGA--TASRIAQLTVIDCLFIGVAQRR 299


>gi|113969399|ref|YP_733192.1| CBS domain-containing protein [Shewanella sp. MR-4]
 gi|113884083|gb|ABI38135.1| CBS domain containing protein [Shewanella sp. MR-4]
          Length = 143

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R           
Sbjct: 9   MRTRVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRAISPNLGSSAE 67

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             KDL TL   V  VM +NP  +     L  A   L +HNI  L V+D+    +GIV + 
Sbjct: 68  TAKDLETLQKRVHQVMTRNPVTVAPHVSLDAATHTLLEHNIGCLPVLDNGD-LVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA  +  Q N   L+VVD+  K  G++   DLLR 
Sbjct: 5   IADIMRTRVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRA 57



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                L TL      VM    +   V     L  A   L E   GC+ V+D    L GI+
Sbjct: 67  ETAKDLETLQKRVHQVM--TRNPVTVAPHVSLDAATHTLLEHNIGCLPVLD-NGDLVGIV 123

Query: 268 TEGDIFRNF 276
           T  D+ R +
Sbjct: 124 TWKDLLRAY 132


>gi|212711533|ref|ZP_03319661.1| hypothetical protein PROVALCAL_02606 [Providencia alcalifaciens DSM
           30120]
 gi|212685635|gb|EEB45163.1| hypothetical protein PROVALCAL_02606 [Providencia alcalifaciens DSM
           30120]
          Length = 286

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 44/184 (23%), Positives = 72/184 (39%), Gaps = 15/184 (8%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSF------------QFHCAVEKIKAIKGRVVITGIG 73
            AL + I +   L  +   L  E ++            QF   +++I + + RV I GIG
Sbjct: 86  SALHNRITQTDSLMVVAQKLALEKNYSITETTKRLDFKQFEKIIQRIDSAQ-RVQIVGIG 144

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG     L+  L   G  +               +T  D+ IV+S+SG   ++      
Sbjct: 145 GSGLTAKDLSYKLQKIGITTLVEPDHHVQIAAALTLTPQDVQIVISFSGKRKDMLTAANI 204

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             +    +IAIT    S +A  +D +L    E        +  +S   Q  + D L +AL
Sbjct: 205 GHQNGACVIAITRSKDSPLAQMSDYMLESVAEENEWR--SSSISSRTAQNTLTDLLFMAL 262

Query: 194 LESR 197
           L+ R
Sbjct: 263 LQKR 266


>gi|156742804|ref|YP_001432933.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156234132|gb|ABU58915.1| CBS domain containing protein [Roseiflexus castenholzii DSM 13941]
          Length = 428

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 22/126 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTL- 283
           V+   P+   + +L ++      VVD   ++ GIIT+GD+             ++L+   
Sbjct: 132 VRPDTPIAVIVELLIDRALRSAPVVDAENRVVGIITDGDLLTRGATELPLALQRELSLAE 191

Query: 284 -------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                        +  D+M  +P  +   T L  A  ++    +  + VVD+  + +G+V
Sbjct: 192 RAAAVEILAERPHTAADLMTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMV 251

Query: 331 HFLDLL 336
              DLL
Sbjct: 252 SRYDLL 257



 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 64/159 (40%), Gaps = 32/159 (20%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P    G       D+M +G  IP V+   PL + +  L E     V VVDE   + GII
Sbjct: 270 EPVVPSGGAPQTVGDIMMTG--IPTVRPDTPLAETLDHLLETDKRRVVVVDEHHHVVGII 327

Query: 268 TEGDIFRNFHKDLNT-------------------------LSVEDVMIKNPKVILEDTLL 302
           ++GD+ R   K + +                          +  DVM      +  D  +
Sbjct: 328 SDGDVLRRAAKRVRSGALRALAAWFGGGARPPGLEVAAEGRTAADVMTSPVVTLPADAPI 387

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T A++L+  H I  + VVD  ++ +G+V      R G++
Sbjct: 388 TEAVRLMMTHKIKRIPVVDADKRFVGMVG-----RAGVL 421



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R        L+V D+M +    +  DT + V ++LL    +    VVD   + +GI+   
Sbjct: 110 RAVGPFPAHLTVADIMSRQVVSVRPDTPIAVIVELLIDRALRSAPVVDAENRVVGIITDG 169

Query: 334 DLLRFG 339
           DLL  G
Sbjct: 170 DLLTRG 175



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/102 (19%), Positives = 39/102 (38%), Gaps = 14/102 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
                  + +  PL +A  I++++    + VVDE  +L G+++  D+     + L     
Sbjct: 210 MTPDPVTLPMTTPLAEAAAIMADRGLKRIPVVDEQHRLVGMVSRYDLLSTVAEGLRQRPA 269

Query: 283 ----------LSVEDVMIKNPKVILEDTLLTVAM-QLLRQHN 313
                      +V D+M+     +  DT L   +  LL    
Sbjct: 270 EPVVPSGGAPQTVGDIMMTGIPTVRPDTPLAETLDHLLETDK 311


>gi|332977128|gb|EGK13931.1| nucleotidyltransferase [Psychrobacter sp. 1501(2011)]
          Length = 351

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 1/107 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           ++     + +A+ IL E       V D+  KL G +T+GDI R   K  +   SV  VM 
Sbjct: 9   ILTPESNIREAMRILDETALRIAIVCDDNNKLLGTVTDGDIRRGLLKSCDMQDSVTAVMN 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           KNPK I +       +++  ++++  L +VD+    +G+     +L+
Sbjct: 69  KNPKTIKQAHTRQQRIEIFDRYDLLALPIVDNQNYLVGLETLHQVLQ 115


>gi|283786122|ref|YP_003365987.1| inosine-5'-monophosphate dehydrogenase [Citrobacter rodentium
           ICC168]
 gi|282949576|emb|CBG89194.1| inosine-5'-monophosphate dehydrogenase [Citrobacter rodentium
           ICC168]
          Length = 488

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVMRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV    +L GIIT  D+   F  DL +  V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTADNELVGIITGRDVR--FVTDL-SQPVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGESREVVLAKMHEKRVEKALVVDDNFHLIGMITVKDFQKA 204


>gi|227817397|ref|YP_002817406.1| CBS domain protein [Bacillus anthracis str. CDC 684]
 gi|227004011|gb|ACP13754.1| CBS domain protein [Bacillus anthracis str. CDC 684]
          Length = 300

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 45  QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 104

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM ++P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 105 D----MIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 160

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 161 SRQDVLQA 168


>gi|161612735|ref|YP_001586700.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|161362099|gb|ABX65867.1| hypothetical protein SPAB_00434 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|267994623|gb|ACY89508.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|323130839|gb|ADX18269.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|326628712|gb|EGE35055.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 516

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 25  EILPMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMD 78

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    S V+        V     L 
Sbjct: 79  TVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLH 135

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILE 298
           +   +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E
Sbjct: 136 EVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVRE 192

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 193 GEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 232


>gi|158321036|ref|YP_001513543.1| signal-transduction protein [Alkaliphilus oremlandii OhILAs]
 gi|158141235|gb|ABW19547.1| putative signal-transduction protein with CBS domains [Alkaliphilus
           oremlandii OhILAs]
          Length = 142

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD-LNTLSVEDVMIKN 292
               + +    + E   G + V ++  +  GIIT+ DI  R   ++  +  +  +VM K 
Sbjct: 16  PNASIAEVAKKMKELNVGSIPVCNQQNQPLGIITDRDIVLRCVAQNSKDNATASEVMSKG 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  DT +  A +++ ++ +  L V+ +  K +G+V   DL
Sbjct: 76  IVSVTPDTHIHEAARIMGENQVRRLPVI-ENGKMVGMVSIGDL 117



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM       L +  +    + +++ N+  + V +   + +GI+   D++
Sbjct: 3   VKDVMTNKIYAALPNASIAEVAKKMKELNVGSIPVCNQQNQPLGIITDRDIV 54


>gi|116491965|ref|YP_803700.1| RpiR family transcriptional regulator [Pediococcus pentosaceus ATCC
           25745]
 gi|116102115|gb|ABJ67258.1| transcriptional regulator, RpiR family [Pediococcus pentosaceus
           ATCC 25745]
          Length = 270

 Score = 86.5 bits (213), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 71/155 (45%), Gaps = 2/155 (1%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             ++ +    V  +     RV I G+G SG+   +L+  L   G  +F    +   +   
Sbjct: 103 KRINQKTLNQVAMLIKNAPRVFIFGLGSSGYNAQELSQRLMRMGINAFAPSDSHTMYISS 162

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            ++ +DDL+IVLS SG S+E+   +  A++  + +++IT+ + S +A  +D  L    + 
Sbjct: 163 SIMQKDDLLIVLSVSGKSNEVNEAVAVAKQHQLKVVSITAFDDSPLAEMSDYQL--SVQY 220

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                      S +  + I D L+  LL++  +  
Sbjct: 221 SEFVDNTQFINSQLGVVYIIDILSTMLLQNETYKA 255


>gi|170290691|ref|YP_001737507.1| inosine-5'-monophosphate dehydrogenase [Candidatus Korarchaeum
           cryptofilum OPF8]
 gi|170174771|gb|ACB07824.1| inosine-5'-monophosphate dehydrogenase [Candidatus Korarchaeum
           cryptofilum OPF8]
          Length = 476

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 69/166 (41%), Gaps = 13/166 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     + ++IA+            +LH    +      A  V  +   I  
Sbjct: 41  SIPILSSPMDTVTEEEMSIAMARMGGLG-----ILHRNCSVEEQVNMAKAVKRAESFIIR 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +A  ++ E     + V+  G+KL GI+T  D+   +  +  +L V+D+
Sbjct: 96  DVITVSPEDSVEEARRLMREHGISGLPVIV-GRKLVGIVTRRDV---YFAENGSLLVKDI 151

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M K+P  +  +     A +++ ++ I  L VV +  + IG+V   D
Sbjct: 152 MTKDPITVGPEITPQEARKIMARYKIEKLPVVSESGELIGLVTAKD 197


>gi|121595155|ref|YP_987051.1| signal-transduction protein [Acidovorax sp. JS42]
 gi|120607235|gb|ABM42975.1| putative signal-transduction protein with CBS domains [Acidovorax
           sp. JS42]
          Length = 145

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDL 280
             +   +  V+    ++ A+  +++K  G + V+ EG ++ GI TE D  R      +  
Sbjct: 10  TKADGQVHAVEPSDTVLTALRRMADKGIGALLVM-EGDQIAGIFTERDYARKMVLLGRSS 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               V +VM +  + +         M L+ ++ +  L VV +  + +G+V   DL++
Sbjct: 69  GDTPVSEVMTRAVRFVRPAQSAEQCMALMTENRLRHLPVV-EGGRVVGLVSIGDLVK 124



 Score = 39.1 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 15/78 (19%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+        LG              ++  V+        + +++E R   + VV 
Sbjct: 52  FTERDYA--RKMVLLGRSSGDTPVSEVMTRAVRFVRPAQSAEQCMALMTENRLRHLPVV- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           EG ++ G+++ GD+ ++ 
Sbjct: 109 EGGRVVGLVSIGDLVKSV 126


>gi|329850815|ref|ZP_08265660.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis biprosthecum
           C19]
 gi|328841130|gb|EGF90701.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis biprosthecum
           C19]
          Length = 485

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 68/168 (40%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LA+A+ ++         ++H              V      + +
Sbjct: 39  NIPLVSSAMDTVTEAPLAVAMAQAGGLG-----IVHRNLTNEQQADEIRAVKRFESGMVI 93

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +   I++ +R     VV+ E  +L GI+T  DI   F  D +  + E 
Sbjct: 94  NPITIHPDTKLGEVRDIIARRRISGFPVVERETNRLVGILTNRDIR--FESDNSKTAAEL 151

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  +N   + +    + A  L+ +H I  ++VVD+  +++G++   D+
Sbjct: 152 MTTENLITVTDGVDQSRARDLMARHRIERIIVVDEAYRSVGLITVKDM 199


>gi|261340862|ref|ZP_05968720.1| transcriptional regulator, RpiR family [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317292|gb|EFC56230.1| transcriptional regulator, RpiR family [Enterobacter cancerogenus
           ATCC 35316]
          Length = 282

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++  + R+++TGIG SG +       L   G  + 
Sbjct: 104 KEKVAAMHATLDVNTEEKLLDSVAMLRNAR-RIILTGIGASGLVARNFGWKLTKIGLNAI 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  +D+++ +S+SG   E+        R    ++AIT    + +  
Sbjct: 163 VEQDMHALLATVQAMDPEDVLLAISYSGERREINMATDETLRVGGKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTSAQMMLTDLLFMALVQQ 262


>gi|223041505|ref|ZP_03611708.1| inositol-5-monophosphate dehydrogenase [Actinobacillus minor 202]
 gi|223017763|gb|EEF16170.1| inositol-5-monophosphate dehydrogenase [Actinobacillus minor 202]
          Length = 488

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---TEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD+   L GIIT  D    F +DL+   V  VM 
Sbjct: 99  VTVSPELTLGELAELVKKNGFAGYPVVDKEGNLVGIITGRDTR--FVRDLSK-PVSKVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+      + L+ +H +  +++VDD  K  G++   D  + 
Sbjct: 156 PKERLVTVKENATREEILDLMHEHRVEKVLMVDDSFKLKGMITVKDFQKA 205



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    S VM   + +  VK      + + ++ E R   V +VD+  KLKG+IT  D 
Sbjct: 143 VRDLSKPVSKVMTPKERLVTVKENATREEILDLMHEHRVEKVLMVDDSFKLKGMITVKDF 202

Query: 273 FRNFHK 278
            +   K
Sbjct: 203 QKAEQK 208


>gi|330445253|ref|ZP_08308905.1| inosine-5'-monophosphate dehydrogenase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328489444|dbj|GAA03402.1| inosine-5'-monophosphate dehydrogenase [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 487

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMVSASMDTVTEGRLAIALAQEGGIGFIHKNMSIEQQANQVRMVKKFEAGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   + +E  F    VV +  +L GIIT  D+   F  DL ++ VEDVM 
Sbjct: 98  VTVKPTATIADVKRLTAENGFAGYPVVTDNNELVGIITGRDVR--FVTDL-SMKVEDVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N     E         +++QH +  +++VDD  +  G++   D  + 
Sbjct: 155 SKTNLASAKEGASREEVEAIMQQHRVEKVLLVDDEFRLKGMITAKDFQKA 204


>gi|161502332|ref|YP_001569444.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160863679|gb|ABX20302.1| hypothetical protein SARI_00365 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 516

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 77/220 (35%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 25  EILPMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMD 78

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    S V+        V     L 
Sbjct: 79  TVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLH 135

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILE 298
           +   +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E
Sbjct: 136 EVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVRE 192

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 193 GEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 232


>gi|156937999|ref|YP_001435795.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566983|gb|ABU82388.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 327

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 57/113 (50%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
                P+     P+++A   + E  +G V ++ +   L GI+TE D+ R     KD+  +
Sbjct: 10  MRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRAVAEGKDIAQI 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+D+M K   V+ +D  + + +QL   + +  + V DD  + IG++   D++
Sbjct: 70  PVKDLMKKTTVVVHKDVPVRLVLQLFGAYKVRRMPVTDDDGRVIGVISSTDVV 122



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +L+ +D+M K   V   +  +  A + + +H    ++++ D     GI+   D+LR 
Sbjct: 1   MTSLTAKDIMRKVFPVADPEEPVLEAAKKMVEHEYGAVLILSDDGTLSGIMTERDVLRA 59


>gi|84517370|ref|ZP_01004723.1| inosine-5'-monophosphate dehydrogenase [Loktanella vestfoldensis
           SKA53]
 gi|84508734|gb|EAQ05198.1| inosine-5'-monophosphate dehydrogenase [Loktanella vestfoldensis
           SKA53]
          Length = 482

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 62/167 (37%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       +AIA+ ++         V+H    +         V      +  
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIG-----VVHKNLDIAQQANEIRRVKRFVSGTVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  ++   R     VV    ++ GI+T  D+   F +D +   V  +
Sbjct: 94  NPITLRPDQTLADAKDLMDRYRVTGFPVVGPDGRVIGIVTNRDMR--FAQD-DKTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  L++   I  L++ D   K  G++   D
Sbjct: 151 MTTENLAILHEPADLDEARSLMQARRIEKLLITDHAGKLTGLLTLKD 197



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++ ++   VV    + IGIV   D+
Sbjct: 94  NPITLRPDQTLADAKDLMDRYRVTGFPVVGPDGRVIGIVTNRDM 137


>gi|319794826|ref|YP_004156466.1| signal transduction protein with cbs domains [Variovorax paradoxus
           EPS]
 gi|315597289|gb|ADU38355.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus EPS]
          Length = 142

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KD 279
           +     +         + DA+  L+    G + V+D G+KL G ++E D  R      K+
Sbjct: 8   LKRHDSAAWRTSPHTSVFDALATLARFEVGALMVMD-GEKLVGFLSERDYTRKVALQGKN 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + V ++M  +   +   T     M L+ Q     L VVD   K +G++   DL+
Sbjct: 67  SKEMKVSEIMTPDVMTVTPQTRTRACMALMSQRKFRHLPVVDGD-KVVGMISIQDLM 122


>gi|300245699|gb|ADJ93907.1| putative phenylphosphate synthetase stimulating protein [Clostridia
           bacterium enrichment culture clone BF]
          Length = 228

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 35/117 (29%), Positives = 52/117 (44%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     L+ A  IL E     + VV    KL GI+T+ D+                +  L
Sbjct: 14  VDENTSLMRATRILKENSIRRLPVV-SHGKLIGIVTDRDVKDASPSKTTSLDIHELYYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + V+DVM  NP  + ED  L  A  ++ +  IS L VVD     +G++   D+LR
Sbjct: 73  SEMKVKDVMTSNPLTLSEDDTLEKAALVMLEDKISGLPVVDGLGHLVGLLSETDVLR 129



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + D M K+   + E+T L  A ++L++++I  L VV    K IGIV   D
Sbjct: 3   IRDWMAKDVLTVDENTSLMRATRILKENSIRRLPVV-SHGKLIGIVTDRD 51



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 21/88 (23%), Positives = 38/88 (43%), Gaps = 7/88 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN- 292
                L  A  ++ E +   + VVD    L G+++E D+ R F   +++  ++D  I+  
Sbjct: 89  SEDDTLEKAALVMLEDKISGLPVVDGLGHLVGLLSETDVLRGF---IHSTGIKDGAIQFV 145

Query: 293 ---PKVILEDTLLTVAMQLLRQHNISVL 317
              P V    T +   ++      ISVL
Sbjct: 146 LDLPDVAGSVTRVIECLRKFNARVISVL 173


>gi|119775493|ref|YP_928233.1| inosine 5'-monophosphate dehydrogenase [Shewanella amazonensis
           SB2B]
 gi|119767993|gb|ABM00564.1| inosine-5'-monophosphate dehydrogenase [Shewanella amazonensis
           SB2B]
          Length = 488

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGLGFIHKNMSIEAQAEEVRKVKIYEAGVV---QDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V  G  L +   +     F    VV+E  +L GIIT  D+   F  D +  +V++VM 
Sbjct: 98  VTVTPGTTLAELRKLTERNGFAGYPVVNEANELVGIITGRDVR--FVTDWSK-TVQEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L    +L+  + I  ++VVDD     G++   D  + 
Sbjct: 155 PKERLVTVPEGTKLEDVQKLMHTNRIEKVLVVDDSFCLKGLITVKDFEKA 204


>gi|239931927|ref|ZP_04688880.1| hypothetical protein SghaA1_27144 [Streptomyces ghanaensis ATCC
           14672]
 gi|291440295|ref|ZP_06579685.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343190|gb|EFE70146.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
          Length = 157

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 6/134 (4%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P G        A D+MH       +     L  A  ++ E   G + + D  ++L GI
Sbjct: 6   RRPSGTGRYSMTTAGDIMH--RGAQWIPAHETLDRAAQLMRELNVGALPISDANERLCGI 63

Query: 267 ITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+ DI         D   ++  D+    P+ I  D  ++  +Q ++ H I  L V+   
Sbjct: 64  LTDRDIVVGCVAVGHDPARVTAGDMAQGTPRWIEADADISEVLQEMQTHRIRRLPVI-QN 122

Query: 324 QKAIGIVHFLDLLR 337
           ++ +G++   DL R
Sbjct: 123 KRLVGMISEADLAR 136



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G      +    +  +   ++    + + +  +   R   + V+ + ++L G+I+E D
Sbjct: 75  AVGHDPARVTAGDMAQGTPRWIEADADISEVLQEMQTHRIRRLPVI-QNKRLVGMISEAD 133

Query: 272 IFRNFHKDLNTLSVEDV 288
           + R+   D      E+V
Sbjct: 134 LARHLSDDQIATWAENV 150


>gi|157364486|ref|YP_001471253.1| signal transduction protein [Thermotoga lettingae TMO]
 gi|157315090|gb|ABV34189.1| putative signal transduction protein with CBS domains [Thermotoga
           lettingae TMO]
          Length = 315

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    L     IL  KR   + VVD  +KL GI++  DI +         +VE+ M KN
Sbjct: 28  VKPDRTLRQVKEILRIKRISGLPVVDSERKLIGIVSIEDIIKALEGGYVDDTVEERMTKN 87

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD-----LLRFGII 341
              I  ++ L   +++  +       VVD   K +GIV   D     L + G++
Sbjct: 88  VVSIQSNSTLKDVIEVFEKWPYGRFPVVDSENKLVGIVTKNDVMMALLTKLGLV 141



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 30/67 (44%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I          + + ++M  N   +  D  L    ++LR   IS L VVD  +K IGIV 
Sbjct: 4   ILDRVQSFFLDMPITEIMNSNVISVKPDRTLRQVKEILRIKRISGLPVVDSERKLIGIVS 63

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 64  IEDIIKA 70



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 27/66 (40%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             L   +V  +       ++  ++    L D I +  +  +G   VVD   KL GI+T+ 
Sbjct: 69  KALEGGYVDDTVEERMTKNVVSIQSNSTLKDVIEVFEKWPYGRFPVVDSENKLVGIVTKN 128

Query: 271 DIFRNF 276
           D+    
Sbjct: 129 DVMMAL 134


>gi|86743177|ref|YP_483577.1| signal-transduction protein [Frankia sp. CcI3]
 gi|86570039|gb|ABD13848.1| putative signal-transduction protein with CBS domains [Frankia sp.
           CcI3]
          Length = 236

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 51/109 (46%), Gaps = 4/109 (3%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VED 287
              V+    + DA   +  +  G + V+ E  +L GI+T+ DI  R   + + T S ++ 
Sbjct: 12  PVTVERSTTVRDAAAQMERQGVGALLVM-ENDRLVGIVTDRDIVLRGVARGIPTDSRIDA 70

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M      +     L  A ++ R H I  L VVD  ++ +G++   DLL
Sbjct: 71  LMTTEVITVPSGVDLERAYEIFRDHAIRRLPVVD-GRRLVGLLSVDDLL 118



 Score = 43.0 bits (100), Expect = 0.069,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P  +   T +  A   + +  +  L+V+++  + +GIV   D++  G+
Sbjct: 12  PVTVERSTTVRDAAAQMERQGVGALLVMEND-RLVGIVTDRDIVLRGV 58


>gi|304315356|ref|YP_003850503.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588815|gb|ADL59190.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 187

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 63/126 (50%), Gaps = 5/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
             +    +       ++     G  + +A +I++EK+ G + +V    + +G+ITE DI 
Sbjct: 1   MEMETKVTVHDAMTSNVITADPGISVAEAASIMTEKKVGSI-IVKSNSEPEGLITESDII 59

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   KDL  + +++ +VM +N   I  +  L+ A +L+ +++I  L VV      +GI+
Sbjct: 60  RKVVSKDLAASKVTIGEVMSRNLISIEPERELSDAARLMAKNSIRRLPVV-KDGALVGIL 118

Query: 331 HFLDLL 336
              D++
Sbjct: 119 TSSDVM 124


>gi|296534246|ref|ZP_06896730.1| inosine-5'-monophosphate dehydrogenase [Roseomonas cervicalis ATCC
           49957]
 gi|296265433|gb|EFH11574.1| inosine-5'-monophosphate dehydrogenase [Roseomonas cervicalis ATCC
           49957]
          Length = 506

 Score = 86.1 bits (212), Expect = 6e-15,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 69/172 (40%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ ++         V+H              V      + +
Sbjct: 59  NMPLVSAAMDTVTEGPMAIAMAQAGGIG-----VIHKNLTAEEQAAQVRQVKKFESGMVV 113

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +A  +++  R   + VV+ + ++L GI+T  D+      +     V  
Sbjct: 114 NPVTIHPDQTLAEAQALMAAHRISGIPVVERDSKRLVGILTYRDVRFATDPN---TRVYG 170

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N   +  D   T A +LL +H I  L+VVDD  + IG++   D+ + 
Sbjct: 171 LMTRENLVTVTADVSPTRARELLHKHRIEKLLVVDDAYRCIGLITVKDMDKA 222


>gi|126659209|ref|ZP_01730347.1| chloride channel protein [Cyanothece sp. CCY0110]
 gi|126619514|gb|EAZ90245.1| chloride channel protein [Cyanothece sp. CCY0110]
          Length = 877

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 49/102 (48%), Gaps = 3/102 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              L + +  +S        VV E  +L GI+T+ D+ +   K+     +++ M + P  
Sbjct: 464 DLTLDEVLQAMSNSSHRGFPVV-EQGQLVGIVTQTDLAK-LKKEPGYTPLQEFMTRRPIT 521

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +  L+  + LL ++ +S L V  +  K +GI+   D++R
Sbjct: 522 VQAEASLSDVLYLLNRYQLSRLPVT-EGHKLVGIITRTDIIR 562



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L+   VM    + +  D  L   +Q +   +     VV +  + +GIV   DL +  
Sbjct: 445 LSKLTASQVMESQVETLSSDLTLDEVLQAMSNSSHRGFPVV-EQGQLVGIVTQTDLAKLK 503


>gi|94309989|ref|YP_583199.1| RpiR family transcriptional regulator [Cupriavidus metallidurans
           CH34]
 gi|93353841|gb|ABF07930.1| transcriptional regulator, RpiR family [Cupriavidus metallidurans
           CH34]
          Length = 338

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 69/177 (38%), Gaps = 7/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     A +        L S+ ++L  +   Q    +  +   + R+   G G SG +  
Sbjct: 87  DRPADIAGKVFDRTIATLMSVRNALSAD---QIEHGIRLLAGAR-RIEFYGCGNSGIVAL 142

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G P+              ++   D+ +++S SG + ++      AR     
Sbjct: 143 DIQHKFFRLGIPTTAYSDPHVFSMSAALLRPGDVAVLVSNSGRTWDMLTAATLARSSGAS 202

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++A+T  + S +A  AD+ +    E +S  +   P TS I  L +GD LA  +   R
Sbjct: 203 VLALT-HSGSPLARLADVCVFSDVEEDSEVY--TPMTSRICHLVLGDVLAAGVALDR 256


>gi|251792304|ref|YP_003007029.1| inosine 5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus
           NJ8700]
 gi|247533696|gb|ACS96942.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter aphrophilus
           NJ8700]
          Length = 488

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/182 (22%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M       LAI+L +     F   +  +     ++  +  
Sbjct: 30  NLSTQLTSTIRLNIPMLSAAMDTVTEAKLAISLAQEGGIGFIHKNMTIERQVNRVRKVKK 89

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   I  +  F    VVD  + L GIIT  D       
Sbjct: 90  FESGVV---SDPITVPPNLTISELKAIAQKNGFAGYPVVDADKNLVGIITGRDTRFVSD- 145

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              T +V D+M        + ED       QL+ +H +  ++VVDD  K  G++   D  
Sbjct: 146 --TTKTVADLMTPKERLVTVKEDAQREEIFQLMHEHRVEKVLVVDDNFKLKGMITLKDYQ 203

Query: 337 RF 338
           + 
Sbjct: 204 KA 205



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +       +D+M   + +  VK      +   ++ E R   V VVD+  KLKG+IT  D 
Sbjct: 143 VSDTTKTVADLMTPKERLVTVKEDAQREEIFQLMHEHRVEKVLVVDDNFKLKGMITLKDY 202

Query: 273 FRNFHK 278
            +   K
Sbjct: 203 QKAEQK 208


>gi|294677645|ref|YP_003578260.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
           domain-/unknown function domain-containing protein
           [Rhodobacter capsulatus SB 1003]
 gi|294678383|ref|YP_003578998.1| cyclic nucleotide-binding domain-/cystathionine beta-synthase
           domain-/unknown function domain-containing protein
           [Rhodobacter capsulatus SB 1003]
 gi|3128277|gb|AAC16129.1| hypothetical protein [Rhodobacter capsulatus SB 1003]
 gi|294476465|gb|ADE85853.1| cyclic nucleotide-binding domain protein/cystathionine
           beta-synthase domain protein/protein of unknown function
           DUF294 domain protein [Rhodobacter capsulatus SB 1003]
 gi|294477203|gb|ADE86591.1| cyclic nucleotide-binding domain protein/cystathionine
           beta-synthase domain protein/protein of unknown function
           DUF294 domain protein [Rhodobacter capsulatus SB 1003]
          Length = 608

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 46/139 (33%), Gaps = 3/139 (2%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F+    G K+ T                      P I A   +       + VV    
Sbjct: 123 ERFFNRKRGEKVSTEIATQKVADLIARKPLACAPDTPAIAAAQQMRAAHVSSLGVVAADG 182

Query: 262 KLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L GI+T+ D+              V  VM  +P  +    L +  + ++ +  I  L +
Sbjct: 183 TLLGIVTQRDLSNKILAEGQAPETPVAAVMTADPVSLPPTALGSDILHIMLERRIGHLPI 242

Query: 320 VDDCQKAIGIVHFLDLLRF 338
             +  + +G++   DL RF
Sbjct: 243 T-EAGRFVGMITQTDLTRF 260


>gi|322412902|gb|EFY03810.1| inosine 5'-monophosphate dehydrogenase [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 493

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIITAAMDTVTDSKMAIAIARAGGLG-----VIHKNMSITEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+    +KL GIIT  D+   F  D N   + 
Sbjct: 100 DPFFLTPDHKVSEAEELMQRYRISGVPIVETLANRKLVGIITNRDMR--FISDYN-APIY 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  ++       T L  A ++L +H I  L +VD   +  G++   D+
Sbjct: 157 EHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDQSGRLSGLITIKDI 206


>gi|291279250|ref|YP_003496085.1| hypothetical protein DEFDS_0853 [Deferribacter desulfuricans SSM1]
 gi|290753952|dbj|BAI80329.1| conserved hypothetical protein [Deferribacter desulfuricans SSM1]
          Length = 141

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 14/128 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           +   ++ +      + D +  L EK    V V+D    + G+ +E D+            
Sbjct: 6   YMTKNVIVAYENENIRDVVLRLREKNISGVPVLDGNNNVVGVFSESDLLAQLPDILHEAE 65

Query: 278 -------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  K+L    V+ +M K P  I E+  L  A +L     I  L V++D  K +GI+
Sbjct: 66  QIPLIDVKELTDAPVKTIMGKPPITIHENDSLKKAAELFLTKYIHRLPVLNDEGKLVGII 125

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 126 SLGDVLKA 133



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D M KN  V  E+  +   +  LR+ NIS + V+D     +G+    DLL
Sbjct: 1   MKVKDYMTKNVIVAYENENIRDVVLRLREKNISGVPVLDGNNNVVGVFSESDLL 54



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            G     +     L  A  +   K    + V+++  KL GII+ GD+ + F ++
Sbjct: 84  MGKPPITIHENDSLKKAAELFLTKYIHRLPVLNDEGKLVGIISLGDVLKAFIEN 137


>gi|119873368|ref|YP_931375.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674776|gb|ABL89032.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 145

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + D   I++EK+ G V +VD+ Q   + G+++E DI R    +++  L  +++M  
Sbjct: 19  PDTKIKDIARIMAEKKIGLVVIVDKSQPDVVVGVVSERDIVRAVANNIDVNLPAKEIMTS 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  D  +    +++ +HNI   +VV    K  G++   DL+
Sbjct: 79  PVITIEGDEPIWNVAKIMHEHNIRH-VVVTKGGKLFGVISIRDLV 122



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +  E +  K P     DT +    +++ +  I ++++VD  Q    +G+V   D++R 
Sbjct: 4   MKAEILARKPPITATPDTKIKDIARIMAEKKIGLVVIVDKSQPDVVVGVVSERDIVRA 61


>gi|332974960|gb|EGK11870.1| CBS domain protein [Desmospora sp. 8437]
          Length = 142

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTL-SVEDVMI 290
           V     +  A +++ +   G V VV E  +++G++T+ D+  R   +  N   +V +VM 
Sbjct: 15  VSPQDNVYKAASLMRQHNIGSVPVV-ENGQVRGMVTDRDLVLRALAEQKNEQVTVGEVMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   +  +  A  L+ Q+ I  L VV +  + +G+V   D+
Sbjct: 74  NQVVTGTPEMSVDEASSLMAQNQIRRLPVV-ENNQLVGMVSLGDM 117



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
            ++M +N   +     +  A  L+RQHNI  + VV +  +  G+V   DL LR 
Sbjct: 5   REIMTQNVASVSPQDNVYKAASLMRQHNIGSVPVV-ENGQVRGMVTDRDLVLRA 57


>gi|304413363|ref|ZP_07394836.1| IMP dehydrogenase/GMP reductase [Candidatus Regiella insecticola
           LSR1]
 gi|304284206|gb|EFL92599.1| IMP dehydrogenase/GMP reductase [Candidatus Regiella insecticola
           LSR1]
          Length = 489

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  +    S V+      
Sbjct: 43  NIPVLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIKEQADAVLRVKRHESGVV---SDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   + +   F    VV E ++L GIIT  D+   F  DL+   V  VM 
Sbjct: 100 QTVTPNTTLREVKELTARNGFAGYPVVTEDRELVGIITGRDVR--FVTDLDQ-PVSAVMT 156

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             K+   + E     V +Q + +  I   +VV D     G++   D  + 
Sbjct: 157 AKKHLVTVKEGEAPEVVLQKMHEKRIEKALVVSDDFHLQGLITVKDFQKA 206


>gi|302774691|ref|XP_002970762.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
 gi|300161473|gb|EFJ28088.1| hypothetical protein SELMODRAFT_94149 [Selaginella moellendorffii]
          Length = 433

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V  G  + DA   ++ +R     + +    L GIIT+ D+  R   + L      V  VM
Sbjct: 15  VPDGTSVADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  ++ D+L   A+Q + Q     L VVD+ +    ++  LD+ +
Sbjct: 75  TRNPTFVMSDSLAVDALQKMVQGKFRHLPVVDNGE----VIALLDITK 118



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 6/121 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
                 +++    +  V  G  +  A   + E +   V VV  G K  GI+T  D + R 
Sbjct: 168 RPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNSV-VVTVGNKPVGILTSKDVLMRV 226

Query: 276 FHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---IVH 331
               +   + VE +M  NP+    +  +  A+  +       L V++     +    ++H
Sbjct: 227 VAVGVAADIPVEKIMTTNPECANLEMTIVDALHTMHDGKFLHLPVINKDGHVVSCVDVLH 286

Query: 332 F 332
            
Sbjct: 287 I 287



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 57/200 (28%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           +SA++   I D      + +      D     P  K+ T                 V   
Sbjct: 41  SSALLCGIITDKDVATRVIAEGLRPED----TPVSKVMTRNPT------------FVMSD 84

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGI-IT----EGDIF---RNFHKDLNTLSVEDV 288
              +DA+  + + +F  + VVD G+ +  + IT    +  +         +    +VEDV
Sbjct: 85  SLAVDALQKMVQGKFRHLPVVDNGEVIALLDITKCLYDAIVRMERSALKGNAIAAAVEDV 144

Query: 289 ---------------------M-----------IKNPKVILEDTLLTVAMQLLRQHNISV 316
                                M                 +     +  A + +R+  ++ 
Sbjct: 145 ERQWGNTFSGQSNFVETLKERMFRPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNS 204

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
            +VV    K +GI+   D+L
Sbjct: 205 -VVVTVGNKPVGILTSKDVL 223


>gi|284161808|ref|YP_003400431.1| 6-phospho 3-hexuloisomerase [Archaeoglobus profundus DSM 5631]
 gi|284011805|gb|ADB57758.1| 6-phospho 3-hexuloisomerase [Archaeoglobus profundus DSM 5631]
          Length = 212

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 49/212 (23%), Positives = 88/212 (41%), Gaps = 19/212 (8%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           Y S F S+  +G S +   T+   +R +      + +++S+L  +   +F  A+E  +  
Sbjct: 9   YKSKFSSILAQGGSQVVGETL---IRFLDKVCEHVQNIKSNLDFKKIEEFISALENARC- 64

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
              + + G G+SG +    A  L   G   + V            I  +DL+I +S SG 
Sbjct: 65  ---IFVMGAGRSGFVAKAFAMRLMHLGYNVYVVGETVTP-----RIKPEDLLIAISGSGE 116

Query: 124 SDELKAILYYARR-FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTTS 178
           +  +  I   A+      L+AIT   +S +A  +DIV+ L  + +   +     LAP  +
Sbjct: 117 TLSVVNISRRAKEDIGSKLVAITQRPESTLAKMSDIVIVLKGKDKYERNHELSKLAPLGT 176

Query: 179 AIMQLA--IGDALAIALLESRNFSENDFYVLH 208
                A    D L   ++  +  +E D    H
Sbjct: 177 LFELTALIFLDGLVAEIMNLKQLTEEDLAERH 208


>gi|260433752|ref|ZP_05787723.1| inosine-5'-monophosphate dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
 gi|260417580|gb|EEX10839.1| inosine-5'-monophosphate dehydrogenase [Silicibacter
           lacuscaerulensis ITI-1157]
          Length = 482

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIGVIHKNLTVEEQAREVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  ++    F    VVDE  ++ GI+T  D+      D     V  +M 
Sbjct: 99  ---RADQTLADAKALVERYNFTGFPVVDEEGRVVGIVTNRDMRFATSDD---QPVRALMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E      A+ L++   I  L+VVD   K  G++   D
Sbjct: 153 SDNLAMLREPADREEAISLMKARRIEKLLVVDANGKLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++N +   VVD+  + +GIV   D+
Sbjct: 94  NPVTLRADQTLADAKALVERYNFTGFPVVDEEGRVVGIVTNRDM 137


>gi|307104772|gb|EFN53024.1| hypothetical protein CHLNCDRAFT_137521 [Chlorella variabilis]
          Length = 1085

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 8/102 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
               PL D    L  K    + VVD   KL G+++  D+ +          V+DVM   P
Sbjct: 61  SPDTPLKDVEARL--KGIEGLPVVDAAGKLVGVLSRKDLQK------GGSVVQDVMSAQP 112

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      + A   +  H I  L VVDD  K +GI+   D+
Sbjct: 113 IAMKATDRASAAAHSMIDHKIHRLPVVDDEGKCVGIITRTDI 154



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 11/97 (11%)

Query: 252 GCVAVVDEGQKLKGIITE----GDIFRNFHKDL-----NTLSVEDVMIKNPKVILEDTLL 302
           G  + VD G +L  ++T      DI R+F  D          +  +M  N      DT L
Sbjct: 7   GLSSSVDFGGELLEVVTSLASSDDILRHFSHDEGPHHSKAKRLGQLMQVNVITASPDTPL 66

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                 L    I  L VVD   K +G++   DL + G
Sbjct: 67  KDVEARL--KGIEGLPVVDAAGKLVGVLSRKDLQKGG 101


>gi|171321846|ref|ZP_02910746.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MEX-5]
 gi|171092865|gb|EDT38118.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria MEX-5]
          Length = 153

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VVD G  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDFVYDAIKLMAEKGIGALLVVD-GDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLIGLISIGDLVKSVIAD 132


>gi|108710960|gb|ABF98755.1| CBS domain containing protein, expressed [Oryza sativa Japonica
           Group]
          Length = 230

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 98  WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 157

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 158 DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 210



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  VK    ++ A+ +++EKR   + V+D 
Sbjct: 136 TERDYLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDG 195

Query: 260 GQKLKGIITEGDIFRNF 276
              + G+++ GDI R  
Sbjct: 196 TG-MVGMVSIGDIVRAV 211


>gi|117919508|ref|YP_868700.1| CBS domain-containing protein [Shewanella sp. ANA-3]
 gi|117611840|gb|ABK47294.1| CBS domain containing protein [Shewanella sp. ANA-3]
          Length = 143

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R           
Sbjct: 9   MRTRVVTVEMDDRLTVAKEIFEQANFHHLLVVDE-YKLEGVLSERDLLRAISPNLGSSAE 67

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             KDL TL   V  VM +NP  +     L  A   L +HNI  L V+D+    +GIV + 
Sbjct: 68  TAKDLETLQKRVHQVMTRNPVTVAPHVSLDAATHTLLEHNIGCLPVLDNGD-LVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA ++  Q N   L+VVD+  K  G++   DLLR 
Sbjct: 5   IADIMRTRVVTVEMDDRLTVAKEIFEQANFHHLLVVDE-YKLEGVLSERDLLRA 57



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                L TL      VM    +   V     L  A   L E   GC+ V+D    L GI+
Sbjct: 67  ETAKDLETLQKRVHQVM--TRNPVTVAPHVSLDAATHTLLEHNIGCLPVLD-NGDLVGIV 123

Query: 268 TEGDIFRNF 276
           T  D+ R +
Sbjct: 124 TWKDLLRAY 132


>gi|307353188|ref|YP_003894239.1| Cl- channel voltage-gated family protein [Methanoplanus
           petrolearius DSM 11571]
 gi|307156421|gb|ADN35801.1| Cl- channel voltage-gated family protein [Methanoplanus
           petrolearius DSM 11571]
          Length = 595

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           A + M   + +  +       + I I+ E       V+ E  KL GI+T  +I +    +
Sbjct: 470 AREAMTKKEDLICISPSDSAKEVIKIMDESLHTGFPVI-ENGKLVGIVTLRNIRKEMD-N 527

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLR 337
              + +E++M++    I   + L  A+ ++  + I  L VVDD    K  G +   D++R
Sbjct: 528 SEDVEIEEIMVRELVTINSSSSLEKALSVMMSNAIHHLPVVDDNDPEKLEGFITSTDIMR 587

Query: 338 F 338
            
Sbjct: 588 A 588



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFH 277
                     +  +     L  A++++       + VVD+   +KL+G IT  DI R + 
Sbjct: 531 VEIEEIMVRELVTINSSSSLEKALSVMMSNAIHHLPVVDDNDPEKLEGFITSTDIMRAYT 590

Query: 278 KDLNT 282
           K +N 
Sbjct: 591 KRMNQ 595


>gi|304314784|ref|YP_003849931.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588243|gb|ADL58618.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 156

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 57/147 (38%), Gaps = 35/147 (23%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  VK    + DA  IL E R     VVD+  KL G+I+EGDI R           
Sbjct: 8   MQTEVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRLIEVHSPSLNL 67

Query: 278 --------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                     +    + VE++M      +  D  ++ A +L+ +
Sbjct: 68  LMPSPLDLLELPVRMKHEYDEIAKGIRKAAMMRVEEIMTDRVVTVHPDASVSDAAELMDR 127

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
           H+I  L VV+D +  +GI+   D++  
Sbjct: 128 HDIKRLPVVEDDE-LVGIITRGDIIGA 153



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      +  ++ +  A ++LR++ IS   VVDD  K +G++   D++R 
Sbjct: 4   VKDAMQTEVITVKRNSKIHDAARILRENRISGAPVVDDEGKLVGVISEGDIMRL 57



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 3/68 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G      +   ++M   D +  V     + DA  ++       + VV E  +L GIIT G
Sbjct: 92  GIRKAAMMRVEEIM--TDRVVTVHPDASVSDAAELMDRHDIKRLPVV-EDDELVGIITRG 148

Query: 271 DIFRNFHK 278
           DI   F K
Sbjct: 149 DIIGAFVK 156


>gi|302878075|ref|YP_003846639.1| inosine-5'-monophosphate dehydrogenase [Gallionella
           capsiferriformans ES-2]
 gi|302580864|gb|ADL54875.1| inosine-5'-monophosphate dehydrogenase [Gallionella
           capsiferriformans ES-2]
          Length = 486

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M    G  LAIAL +         +        K+  +    S V+      
Sbjct: 40  NIPLLSAAMDTVTGARLAIALAQEGGIGIIHKNMSSREQAAKVAKVKRFESGVV---KDP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +   +++  + +   + VV +G+++ GI+T  D+   F  +L+   ++++M 
Sbjct: 97  ITITPDMSVRHVLSLTRQYKISGLPVV-QGKQVVGIVTNRDLR--FENNLDQ-PIQNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E+T L  A  L+ +H I  ++VV+D  +  G++   D+L+
Sbjct: 153 PRERLITVKENTSLEDARNLMHKHRIERVLVVNDAFELCGLMTVKDILK 201


>gi|315179446|gb|ADT86360.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
           furnissii NCTC 11218]
          Length = 620

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 58/133 (43%), Gaps = 5/133 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGI 266
           HP             +  +  ++ +V    P+  A   +S +    C A+VD+ Q+L G+
Sbjct: 143 HPAQTESIFLQPVRKL--ASQNLVMVTPDTPIQQAADKMSREPNSSCAAIVDQQQRLIGL 200

Query: 267 ITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+  R     L+    +  +M      +  D L+  A +++  H+I  + +VDD  
Sbjct: 201 VTDKDMTKRVIAHGLDVQQPIATIMTHQLHTVSVDDLVMKASEIMIVHHIQNVPIVDDNF 260

Query: 325 KAIGIVHFLDLLR 337
              GI+    L++
Sbjct: 261 TLQGIITPQQLIQ 273


>gi|327400491|ref|YP_004341330.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
 gi|327315999|gb|AEA46615.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
          Length = 352

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 32/149 (21%), Positives = 54/149 (36%), Gaps = 12/149 (8%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           + IAL      SE           +  +            +   V       + + ++ +
Sbjct: 205 ILIALFIYMGASEE-----EKVALIENVLKKIKIADIMTPNPICVTPDMKASEVLEMMLK 259

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            +     VV E  KL GI+T  D+ +          V DVM +    I        A +L
Sbjct: 260 YKHLGYPVV-EDGKLVGIVTLNDVAKA-----KDALVRDVMTREVVTIGPFDSAFKAFRL 313

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ +  L VV +  K +GIV   DL+R
Sbjct: 314 INEYRVGRLPVV-EDGKLVGIVSRTDLVR 341



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFL 333
               L  + + D+M  NP  +  D   +  ++++ ++    L   VV +  K +GIV   
Sbjct: 224 IENVLKKIKIADIMTPNPICVTPDMKASEVLEMMLKYK--HLGYPVV-EDGKLVGIVTLN 280

Query: 334 DLLRFG 339
           D+ +  
Sbjct: 281 DVAKAK 286



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +          + + + + +         A  +++E R G + VV E  KL GI++  D
Sbjct: 281 DVAKAKDALVRDVMTREVVTIGPFDSAFK-AFRLINEYRVGRLPVV-EDGKLVGIVSRTD 338

Query: 272 IFRNFH 277
           + R   
Sbjct: 339 LVRTLE 344


>gi|325068102|ref|ZP_08126775.1| inosine-5'-monophosphate dehydrogenase [Actinomyces oris K20]
          Length = 508

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        ++  +    S ++  
Sbjct: 49  TPLLSAAMDTVTESDMAIAMARQGGIGILHRNLSIED-----QAQQVRRVKRSESGMV-- 101

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V     +     +    +   + VVD G  L+GIIT  D+     +   +L+V 
Sbjct: 102 -TDPVTVGPDATIAQLDELCGHYKVSGLPVVDAGGNLQGIITNRDLRFVPPERWASLTVR 160

Query: 287 DVMIKNPKVILEDTLL--TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M    ++I  +T +    A  LL +H I  L +VD   +  G++   D ++
Sbjct: 161 ECMTPRDRLITGETGISREDAKALLAEHRIEKLPLVDAEGRLTGLITVKDFVK 213


>gi|313127525|ref|YP_004037795.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293890|gb|ADQ68350.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 134

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
              ++  V +   + DA  ++ E   G V +VD+G +L GI+T  D  +   +    +  
Sbjct: 10  MSTTLHTVSVDTLVEDAAKLMMENGVGSVLIVDDGNQLLGILTTTDFVQIVAERQPKDQT 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V + M  +         +      + QH    + VVDD +  IGI+   DL
Sbjct: 70  PVSEYMTSDVVTTTAQVPIQDVADTMMQHGFHHVPVVDDDEGVIGIISTTDL 121



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  +M      +  DTL+  A +L+ ++ +  +++VDD  + +GI+   D ++ 
Sbjct: 6   VARLMSTTLHTVSVDTLVEDAAKLMMENGVGSVLIVDDGNQLLGILTTTDFVQI 59


>gi|332305590|ref|YP_004433441.1| inosine-5'-monophosphate dehydrogenase [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172919|gb|AEE22173.1| inosine-5'-monophosphate dehydrogenase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 489

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +           +H              V         
Sbjct: 41  NIPLISAAMDTVSEARLAIALAQEGGIG-----FIHKNMPAEAQADHVRMVKKYESGVVS 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +  T+     F    VVD+   L GI+T  D+     +      +  V
Sbjct: 96  DPVTVSPNATIGEINTLSKHHGFSGFPVVDKDNALVGIVTGRDLRF---ESRLDQPISSV 152

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M    +   + E     + ++L+ +H I  ++VVDD  +  G++   D  + 
Sbjct: 153 MTGKDDLVTVKEGADSDLVLELMHEHRIEKILVVDDAFRLTGLITVKDFQKA 204


>gi|302854300|ref|XP_002958659.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
           nagariensis]
 gi|300255984|gb|EFJ40262.1| hypothetical protein VOLCADRAFT_99959 [Volvox carteri f.
           nagariensis]
          Length = 155

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 48/133 (36%), Gaps = 28/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
                 +  A+ +L + R   + VVD   ++ G++++ D+                    
Sbjct: 9   CYPEDTVDSALELLVQNRITGLPVVDAENRVVGVVSDFDLLALDAVGRVNEDQNLFPSAD 68

Query: 274 ---------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                    +          ++DVM   P  +  +T L  A  +L    I  L VVD   
Sbjct: 69  QSWQAFKEVKKMLAKSAGKKIKDVMTVQPITVRPETNLEDATNILIVKKIRRLPVVDSDG 128

Query: 325 KAIGIVHFLDLLR 337
           K +G++   ++++
Sbjct: 129 KLVGLISRGNIVK 141



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  V+    L DA  IL  K+   + VVD   KL G+I+ G+I +
Sbjct: 93  MTVQPITVRPETNLEDATNILIVKKIRRLPVVDSDGKLVGLISRGNIVK 141


>gi|294507614|ref|YP_003571672.1| conserved hypothetical protein containing CBS domain [Salinibacter
           ruber M8]
 gi|294343943|emb|CBH24721.1| conserved hypothetical protein containing CBS domain [Salinibacter
           ruber M8]
          Length = 657

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 5/132 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G   T     +   +       V     +     ++  ++   V V DE  +L G+++  
Sbjct: 496 GYTPTGMQETNVEAYMTTDPFTVHEKESIEFVARLMDWQKIRHVLVEDEEHRLVGLVSHR 555

Query: 271 DIFRNFHKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + R+  +        + V ++M+++P  +  D     A++L+R+H I  L VV +  + 
Sbjct: 556 TLLRHMAERTEQPEGGVPVGEIMVEDPISVSPDRPTLEAVELMREHEIGALPVVRE-NRL 614

Query: 327 IGIVHFLDLLRF 338
           +GI+   D ++ 
Sbjct: 615 VGIITEQDFIQI 626


>gi|303258080|ref|ZP_07344088.1| inosine-5'-monophosphate dehydrogenase [Burkholderiales bacterium
           1_1_47]
 gi|330998707|ref|ZP_08322436.1| inosine-5'-monophosphate dehydrogenase [Parasutterella
           excrementihominis YIT 11859]
 gi|302859099|gb|EFL82182.1| inosine-5'-monophosphate dehydrogenase [Burkholderiales bacterium
           1_1_47]
 gi|329576446|gb|EGG57958.1| inosine-5'-monophosphate dehydrogenase [Parasutterella
           excrementihominis YIT 11859]
          Length = 488

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIAL +          ++H            + V         
Sbjct: 40  NIPFCSAAMDTVTEANLAIALAQEGGIG-----IIHKNMTAQAQAAEVNKVKRHEAGMVA 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D I +  E     + VV +G+K+ G++T  D+     +D     + ++
Sbjct: 95  DPITIGPDMIVADVIRLTREHNISGLPVV-QGEKVLGMVTHRDLRF---EDRMDAKISEI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        I E   L  A +L+ +H +  ++VVDD     G++   D+++ 
Sbjct: 151 MTPAERLITIKEGATLDDAKKLMHEHRLERVLVVDDNFHLRGLMTVKDIIKA 202


>gi|302785239|ref|XP_002974391.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
 gi|300157989|gb|EFJ24613.1| hypothetical protein SELMODRAFT_101308 [Selaginella moellendorffii]
          Length = 236

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNF---HKDLNTLSVE 286
                  + +A+  ++    G + VV +G+K  + GIITE D  R      +   T  V 
Sbjct: 74  FCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRKIIVQGRSSKTTKVG 133

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +   T +  AM+L+ +  I  + VV   +K +G+V   D++R 
Sbjct: 134 DIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVV-KDKKMLGMVSIGDVVRA 186



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ +++EKR   + VV 
Sbjct: 111 ITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVV- 169

Query: 259 EGQKLKGIITEGDIFRNF 276
           + +K+ G+++ GD+ R  
Sbjct: 170 KDKKMLGMVSIGDVVRAV 187


>gi|317131700|ref|YP_004091014.1| putative signal transduction protein with CBS domains
           [Ethanoligenens harbinense YUAN-3]
 gi|315469679|gb|ADU26283.1| putative signal transduction protein with CBS domains
           [Ethanoligenens harbinense YUAN-3]
          Length = 162

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 8/142 (5%)

Query: 204 FYVLHPGG---KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           F     G    + G               I  V+    + +A T++S    G V VVD G
Sbjct: 8   FAARPHGAYPFRGGKKEGTMQVSEIMTTRIVSVEPTATVREAATLMSRNNIGSVPVVD-G 66

Query: 261 QKLKGIITEGDI-FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             ++G++T+ DI  R    +KD +T+ V D+       +     ++ AM L+    +  L
Sbjct: 67  GAVRGMLTDRDIVLRCVSENKDADTVKVSDICTHGAVSVRPQDPVSNAMHLMSAEQVRRL 126

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
            VVD+  K +G++ F D+ R  
Sbjct: 127 PVVDN-GKLVGMLSFADVAREK 147



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                         V+   P+ +A+ ++S ++   + VVD   KL G+++  D+ R    
Sbjct: 91  TVKVSDICTHGAVSVRPQDPVSNAMHLMSAEQVRRLPVVD-NGKLVGMLSFADVAREKTG 149

Query: 279 DLNTLSVEDV 288
                S+ ++
Sbjct: 150 MEVAQSISEI 159


>gi|261379777|ref|ZP_05984350.1| transcriptional regulator HexR [Neisseria subflava NJ9703]
 gi|284797457|gb|EFC52804.1| transcriptional regulator HexR [Neisseria subflava NJ9703]
          Length = 282

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   A+  +   + RV   G+G SG +           G  +              ++T 
Sbjct: 116 ELENAIAILMHAR-RVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLTE 174

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S +GSS EL      A+     +IA+T    S +A  AD VL++  +  +  +
Sbjct: 175 QDVLVAISNTGSSIELLDAASIAKENGAAVIALTRN-DSPLAQMADCVLSIATQENAELY 233

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++QLA+ D LAI L     
Sbjct: 234 --TPMVSRLLQLAVIDILAIGLALRLG 258


>gi|224093670|ref|XP_002309952.1| predicted protein [Populus trichocarpa]
 gi|222852855|gb|EEE90402.1| predicted protein [Populus trichocarpa]
          Length = 488

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVM 289
           +  G  + DA   ++ +R     + D    L GI+T+ DI  R   + L  +   V  +M
Sbjct: 16  IPEGTTVSDACRRMAARRVNAALLTDANALLSGIVTDKDISARVIAEGLRPDQTIVSKIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 76  TRNPIFVNSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITK 119



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 7/146 (4%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV---KIGCPLID 241
            G A+A A+        N+F   H   +     +    +         V       P+  
Sbjct: 134 QGSAIAAAVEGVERQWGNNFTAPHTFIETLRERMFKPSLSTIIGEQTKVAVASPSDPVYV 193

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILE 298
           A   + E R     VV  G K++GI+T  D + R   ++L+     VE VM  NP+ +  
Sbjct: 194 AAKKMRELRVNSAIVV-TGNKIQGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECVTL 252

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T +  A+ ++       L V+D   
Sbjct: 253 ETTVLDALHVMHDGKFLHLPVLDKDG 278


>gi|328952386|ref|YP_004369720.1| inosine-5'-monophosphate dehydrogenase [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452710|gb|AEB08539.1| inosine-5'-monophosphate dehydrogenase [Desulfobacca acetoxidans
           DSM 11109]
          Length = 487

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +    +    V  S   + L
Sbjct: 42  NIPLLSAAMDTVTEAETAICMARQGGIG-----IIHKNMDIERQILEVEKVKKSESGMIL 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    +   + ++   R   + VV + ++L GI+T  D+   F  +L  L V+DV
Sbjct: 97  DPVTIEPDAKISQVLELMRLYRISGIPVV-QNRRLVGIVTNRDLR--FETNL-ELPVKDV 152

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+          L  +  LL Q+ I  L+VVDD  +  G++   D+
Sbjct: 153 MTKDRLVTAPVGITLEDSKALLHQYRIEKLLVVDDDFQLRGLITIKDI 200


>gi|167043504|gb|ABZ08200.1| putative IMP dehydrogenase / GMP reductase domain protein
           [uncultured marine microorganism HF4000_APKG2J17]
          Length = 491

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 69/173 (39%), Gaps = 14/173 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            P  SA M       LAIA+ ++        +       G++  +    S ++ +     
Sbjct: 40  IPLISAAMDTVTESKLAIAMAQAGGIGVIHKNLTPQEQAGEVRAVKKFESGMIVNPF--- 96

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           ++  G  L DA+ I        + VV++    L GI+T  D+      D     V ++M 
Sbjct: 97  IIAPGATLADALRIKESHNISGIPVVEKDSGLLVGILTNRDVRFA---DNMEQPVSELMT 153

Query: 291 KN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +        + ED     A +LL ++ I  L+VVD   + +G++   D+ + 
Sbjct: 154 PHTDEKPLITVSEDIGHDDAKRLLHKYRIEKLLVVDGDFRCVGLMTVKDIEKA 206


>gi|133919931|emb|CAM12491.1| hypothetical protein [uncultured bacterium]
          Length = 488

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIAL +          ++H            + V         
Sbjct: 40  NIPFCSAAMDTVTEANLAIALAQEGGIG-----IIHKNMTAQAQAAEVNKVKRHEAGMVA 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D I +  E     + VV +G+K+ G++T  D+     +D     + ++
Sbjct: 95  DPITIGPDMIVADVIRLTREHNISGLPVV-QGEKVLGMVTHRDLRF---EDRMDAKISEI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        I E   L  A +L+ +H +  ++VVDD     G++   D+++ 
Sbjct: 151 MTPAERLITIKEGATLDDAKKLMHEHRLERVLVVDDNFHLRGLMTVKDIIKA 202


>gi|306834590|ref|ZP_07467703.1| inosine-5'-monophosphate dehydrogenase [Streptococcus bovis ATCC
           700338]
 gi|304423392|gb|EFM26545.1| inosine-5'-monophosphate dehydrogenase [Streptococcus bovis ATCC
           700338]
          Length = 493

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIVTAAMDTVTDSKMAIAIARAGGLG-----VVHKNMSIQDQAEEIRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E ++L GIIT  D+   F  D +T   +
Sbjct: 100 DPFFLTPKHSVSEAEELMQRYRISGVPIVETLENRELVGIITNRDMR--FISDYHTPISK 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSEKLVTAPVGTDLETAERILHEHRIEKLPLVDEAGRLSGLITIKDI 206


>gi|196250717|ref|ZP_03149405.1| CBS domain containing protein [Geobacillus sp. G11MC16]
 gi|196209796|gb|EDY04567.1| CBS domain containing protein [Geobacillus sp. G11MC16]
          Length = 148

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 5/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             ++  V     + +A  I+S+K  G + VV E  ++KG+IT+ DI 
Sbjct: 1   MTNNNANKVQDIMTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ESGQVKGMITDRDIT 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KD   + V DVM         +  +  A  ++ QH +  L +V +  +  GIV
Sbjct: 60  LRVTSQGKDPAAVKVSDVMTNQVVTGTPNMSVQDAANVMAQHQVRRLPIV-ENNQLQGIV 118

Query: 331 HFLDL 335
              D+
Sbjct: 119 ALGDI 123



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + N   V+D+M KN   +  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 3   NNNANKVQDIMTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ESGQVKGMITDRDIT 59


>gi|78188467|ref|YP_378805.1| IMP dehydrogenase [Chlorobium chlorochromatii CaD3]
 gi|78170666|gb|ABB27762.1| inosine-5'-monophosphate dehydrogenase [Chlorobium chlorochromatii
           CaD3]
          Length = 497

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 16/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  +        +  +     ++  +    S ++ +  ++
Sbjct: 41  NIPLVSAAMDTVTESRLAIALARAGGIGIIHKNLSIEQQAREVAKVKRYESGIIRNPFTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTL 283
                   + DA+ ++       + V+       D  + LKGI+T  D+      +    
Sbjct: 101 Y---DDATVQDALDLMHRHAISGIPVIERPQNEGDASRILKGIVTNRDLRIKLQPN---A 154

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +M   N     ED  L  A ++L  + I  L++ D+     G++ F D+ +
Sbjct: 155 PIAQIMTSQNLITAREDVGLQQAEEMLLANRIEKLLITDNAGNLKGLITFKDIQK 209


>gi|56479475|ref|YP_161064.1| hypothetical protein ebA7121 [Aromatoleum aromaticum EbN1]
 gi|56315518|emb|CAI10163.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 148

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 51/131 (38%), Gaps = 5/131 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T       +   G     V  G  + DA+ ++++   G V V  E   L GI TE D  
Sbjct: 1   MTTMTVRQILETKGAGAHAVSPGVSVFDALAVMAKHDIGAVLVT-ENDHLTGIFTERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R            +V ++M  N   I     +   M ++ ++    L VV +  K  GIV
Sbjct: 60  RKLVLKGLSSKEATVGELMTPNVCTITPSHTVDEVMNIMTENRFRHLPVV-ERGKIAGIV 118

Query: 331 HFLDLLRFGII 341
              D+++  I+
Sbjct: 119 TIGDVVKSIIV 129


>gi|319637731|ref|ZP_07992497.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria mucosa
           C102]
 gi|317400886|gb|EFV81541.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria mucosa
           C102]
          Length = 282

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   A+  +   + RV   G+G SG +           G  +              ++T 
Sbjct: 116 ELENAIAILMHAR-RVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLTE 174

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++ +S +GSS EL      A+     +IA+T    S +A  AD VL++  +  +  +
Sbjct: 175 QDVLVAISNTGSSIELLDAASIAKENGASVIALTRN-DSPLAQMADCVLSIATQENAELY 233

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++QLA+ D LAI L     
Sbjct: 234 --TPMVSRLLQLAVIDILAIGLALRLG 258


>gi|229032257|ref|ZP_04188230.1| hypothetical protein bcere0028_42990 [Bacillus cereus AH1271]
 gi|228729037|gb|EEL80040.1| hypothetical protein bcere0028_42990 [Bacillus cereus AH1271]
          Length = 437

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|194016198|ref|ZP_03054812.1| transcriptional regulator, RpiR family [Bacillus pumilus ATCC 7061]
 gi|194011671|gb|EDW21239.1| transcriptional regulator, RpiR family [Bacillus pumilus ATCC 7061]
          Length = 286

 Score = 86.1 bits (212), Expect = 7e-15,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 63/178 (35%), Gaps = 6/178 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G     +S      + I      +  ++  L+ +   QF   +E++K    + V  G G 
Sbjct: 90  GEIEASDSVADIKHKVIELTTNSIQDMKHILEDQAVTQF---IEQMKQAH-KTVFFGAGA 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  I           G            +      T  D I+ +S SG S E+   + +A
Sbjct: 146 SSFIAGDAYHKFLQLGFEVSLCSDPHMMNMIATHATEHDFIVAISHSGESREILDAVQFA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +     + +ITS  KS +A  +D  L       +         S I QL I D L +A
Sbjct: 206 KEKGAKVASITSYPKSELAKRSDFHLLSSSRETTYR--SDSMISRINQLVIIDVLYVA 261


>gi|225850049|ref|YP_002730283.1| response regulator PleD [Persephonella marina EX-H1]
 gi|225644981|gb|ACO03167.1| response regulator PleD [Persephonella marina EX-H1]
          Length = 300

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 3/119 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +       V   C   + + I+  K+ G V VVD  ++LK I+T+ D+  +         
Sbjct: 8   YMSKDPVTVSPECSFKEIVDIMKTKKIGSVLVVDADRRLKDIVTQSDLIMHLLHGNLEAK 67

Query: 285 VEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
           V++ +  K    I E++ +  A+    ++ I  L V+D   + +GI+   D+L+   GI
Sbjct: 68  VKNFIRDKKLITIDENSHVFDAVSYFEKYRIKHLPVLDGDSRLVGIITATDILKKVAGI 126



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V+D M K+P  +  +      + +++   I  ++VVD  ++   IV   DL+
Sbjct: 3   FKVKDYMSKDPVTVSPECSFKEIVDIMKTKKIGSVLVVDADRRLKDIVTQSDLI 56


>gi|15921004|ref|NP_376673.1| inosine-5'-monophosphate dehydrogenase [Sulfolobus tokodaii str. 7]
 gi|15621788|dbj|BAB65782.1| 254aa long hypothetical inosine-5'-monophosphate dehydrogenase
           [Sulfolobus tokodaii str. 7]
          Length = 254

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +++A  I++ +    + +V+E  ++ GIIT  DI +   K  N  +V D   KN
Sbjct: 143 IPQNSTILEAAKIMAMRGIRRLPIVNE-YRMVGIITAADIVKYLEKHRNIGNVLDAGTKN 201

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  I   T +  A +++++  I  L VVD+  K +GIV   DL+
Sbjct: 202 PWTINRYTSIIDAAKIMKEKKIGTLPVVDNS-KLVGIVTERDLM 244



 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 54/106 (50%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+IDAI I+     G + VV E Q ++G+ TE ++         +  V+ +M   
Sbjct: 81  VTPDTPVIDAIKIMINNNIGGLPVV-ENQVIRGLFTEREVINVIANLKFSGIVDSIMSTK 139

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + I +++ +  A +++    I  L +V++  + +GI+   D++++
Sbjct: 140 IETIPQNSTILEAAKIMAMRGIRRLPIVNE-YRMVGIITAADIVKY 184



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 14/107 (13%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--------KLKGIITEGDIFRNF 276
           +   ++  V +   + + +++LS +  G V V+D  +         +    +E  +    
Sbjct: 8   YMNTAVVTVSLNSTMEEILSVLSRESSGRVIVLDNEKPISIITTRSIIAAFSEYSL---- 63

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
             DL +L  +D+M ++   +  DT +  A++++  +NI  L VV++ 
Sbjct: 64  --DLFSLKAKDLMSEDLISVTPDTPVIDAIKIMINNNIGGLPVVENQ 108



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +IDA  I+ EK+ G + VVD   KL GI+TE D+  + 
Sbjct: 209 TSIIDAAKIMKEKKIGTLPVVD-NSKLVGIVTERDLMYSL 247


>gi|218440518|ref|YP_002378847.1| chloride channel core [Cyanothece sp. PCC 7424]
 gi|218173246|gb|ACK71979.1| Chloride channel core [Cyanothece sp. PCC 7424]
          Length = 875

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            L   +  +S  R     VV E  KL GI+T+ D+  N       L++  +M   P  + 
Sbjct: 467 SLEAVLQAMSISRHRGFPVV-EEGKLVGIVTQSDLS-NLGDRSEELTLRQIMTPKPITVQ 524

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +T L+  + LL ++ +S L V  +  K +GI+   D+++  +
Sbjct: 525 PETSLSDVLYLLNRYQLSRLPVT-EGHKLVGIITRTDIIQAEV 566



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  V+    L D + +L+  +   + V  EG KL GIIT  DI + 
Sbjct: 516 MTPKPITVQPETSLSDVLYLLNRYQLSRLPVT-EGHKLVGIITRTDIIQA 564



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L   DVM    + +     L   +Q +         VV++  K +GIV   DL   G
Sbjct: 446 LSKLKASDVMQSQVETLDSYLSLEAVLQAMSISRHRGFPVVEE-GKLVGIVTQSDLSNLG 504


>gi|170780972|ref|YP_001709304.1| inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis
           subsp. sepedonicus]
 gi|169155540|emb|CAQ00652.1| inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis
           subsp. sepedonicus]
          Length = 500

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 69/209 (33%), Gaps = 27/209 (12%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-- 195
           +I +T ++  ++  H D++                 AP  S+ M       +AIA+    
Sbjct: 9   VIGLTYDDVMLLPGHTDVIPSEADTTSRLTRNITVAAPLLSSAMDTVTEARMAIAMARQG 68

Query: 196 -----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
                 RN S  D            +            +    +    + +   +  +  
Sbjct: 69  GLGVIHRNLSIEDQAAF--------VDKVKRSESGMITNPVTTRPDATVAEVDALCGQFC 120

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV-----ILEDTLLTVA 305
              + VV+    L GIIT  D+         T  V DVM   P +     I  D     A
Sbjct: 121 VSGLPVVESDGTLVGIITNRDMRFVSPVQAATTLVRDVMTPTPLITGQVGIDPD----HA 176

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +  +H I  L +VDD  K  G++   D
Sbjct: 177 IAIFAEHKIEKLPLVDDQGKLRGLITVKD 205



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 21/105 (20%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MI 290
             + +A   ++  R G + V               I RN   +     V+ V      MI
Sbjct: 53  DTVTEARMAIAMARQGGLGV---------------IHRNLSIEDQAAFVDKVKRSESGMI 97

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            NP     D  +     L  Q  +S L VV+     +GI+   D+
Sbjct: 98  TNPVTTRPDATVAEVDALCGQFCVSGLPVVESDGTLVGIITNRDM 142


>gi|302807987|ref|XP_002985688.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
 gi|300146597|gb|EFJ13266.1| hypothetical protein SELMODRAFT_122545 [Selaginella moellendorffii]
          Length = 236

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNF---HKDLNTLSVE 286
                  + +A+  ++    G + VV +G+K  + GIITE D  R      +   T  V 
Sbjct: 74  FCSTDDTVYEAVRSMTTHNVGALLVVKKGEKGAIAGIITERDYLRKIIVQGRSSKTTKVG 133

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +   T +  AM+L+ +  I  + VV   +K +G+V   D++R 
Sbjct: 134 DIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVV-KDKKMLGMVSIGDVVRA 186



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ +++EKR   + VV 
Sbjct: 111 ITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVTPSTRVLQAMELMTEKRIRHIPVV- 169

Query: 259 EGQKLKGIITEGDIFRNF 276
           + +K+ G+++ GD+ R  
Sbjct: 170 KDKKMLGMVSIGDVVRAV 187


>gi|258593251|emb|CBE69590.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 137

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 51/127 (40%), Gaps = 14/127 (11%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------- 275
            +    +  V        ++ ++ +K    + V D   KL GI+T+ D            
Sbjct: 5   RYMQTKLVTVGPDERANASLYMMKKKGIRHLLVTD-NSKLLGIVTDRDFRLARPSPATSL 63

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                H  L  L V+++M K    +  +T +  A +LL    I  L VV +  K +GI+ 
Sbjct: 64  SIYEVHYLLEKLKVKEIMTKKVVTVTPETPIADAARLLLNRRIGALPVVKES-KLVGIIT 122

Query: 332 FLDLLRF 338
             D++R 
Sbjct: 123 ETDIIRA 129



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 8/84 (9%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-------VKIGCPLIDAITILSEKRFG 252
           ++ DF +  P             ++       +       V    P+ DA  +L  +R G
Sbjct: 48  TDRDFRLARPSPATSLSIYEVHYLLEKLKVKEIMTKKVVTVTPETPIADAARLLLNRRIG 107

Query: 253 CVAVVDEGQKLKGIITEGDIFRNF 276
            + VV E  KL GIITE DI R  
Sbjct: 108 ALPVVKES-KLVGIITETDIIRAL 130



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V+  M      +  D     ++ ++++  I  L+V D+  K +GIV   D
Sbjct: 3   VKRYMQTKLVTVGPDERANASLYMMKKKGIRHLLVTDNS-KLLGIVTDRD 51


>gi|148273745|ref|YP_001223306.1| inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
 gi|147831675|emb|CAN02644.1| inosine-5'-monophosphate dehydrogenase [Clavibacter michiganensis
           subsp. michiganensis NCPPB 382]
          Length = 500

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/209 (19%), Positives = 70/209 (33%), Gaps = 27/209 (12%)

Query: 141 LIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE-- 195
           +I +T ++  ++  H D++                 AP  S+ M       +AIA+    
Sbjct: 9   VIGLTYDDVMLLPGHTDVIPSEADTTSRLTRNISVAAPLLSSAMDTVTEARMAIAMARQG 68

Query: 196 -----SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
                 RN S  D            +            +    +    + +   +  + R
Sbjct: 69  GLGVIHRNLSIEDQAAF--------VDKVKRSESGMITNPVTTRPDATVAEVDALCGQFR 120

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV-----ILEDTLLTVA 305
              + VV+    L GIIT  D+            V DVM + P +     I  D     A
Sbjct: 121 VSGLPVVESDGTLVGIITNRDMRFVSPVQAAITLVRDVMTRTPLITGQVGIDPD----HA 176

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +  +H I  L +VDD  K  G++   D
Sbjct: 177 IAIFAEHKIEKLPLVDDQGKLRGLITVKD 205



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 36/105 (34%), Gaps = 21/105 (20%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MI 290
             + +A   ++  R G + V               I RN   +     V+ V      MI
Sbjct: 53  DTVTEARMAIAMARQGGLGV---------------IHRNLSIEDQAAFVDKVKRSESGMI 97

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            NP     D  +     L  Q  +S L VV+     +GI+   D+
Sbjct: 98  TNPVTTRPDATVAEVDALCGQFRVSGLPVVESDGTLVGIITNRDM 142


>gi|104779464|ref|YP_605962.1| hypothetical protein PSEEN0171 [Pseudomonas entomophila L48]
 gi|95108451|emb|CAK13145.1| conserved hypothetical protein; CBS domain protein [Pseudomonas
           entomophila L48]
          Length = 145

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                          ++  +     ++DA+ +L+EK  G + VV E  ++ GI++E D  
Sbjct: 1   MKNVEQILKNKSQPQAVYTIAPDDSVLDALKMLAEKNIGALPVV-ENDQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +     +V ++M      +     L   M L+   ++  L VV +  K +G++
Sbjct: 60  RKLVLKGRSSPFTTVREIMSSPVVTVDPKQNLEYCMNLMTNRHLRHLPVV-ENGKLLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|52140899|ref|YP_085932.1| CBS domain-containing cytosolic protein [Bacillus cereus E33L]
 gi|196040852|ref|ZP_03108150.1| thioesterase family protein [Bacillus cereus NVH0597-99]
 gi|51974368|gb|AAU15918.1| cytosolic protein containing multiple CBS domains [Bacillus cereus
           E33L]
 gi|196028306|gb|EDX66915.1| thioesterase family protein [Bacillus cereus NVH0597-99]
          Length = 437

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM ++P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|114332210|ref|YP_748432.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas eutropha C91]
 gi|114309224|gb|ABI60467.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas eutropha C91]
          Length = 487

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 83/204 (40%), Gaps = 18/204 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  H++++   + L  +         P  SA M       LAIA+ +    
Sbjct: 7   ALTFDDILLLPAHSEVLPRDVDLTTQLTRSLRIRIPIVSAAMDTVTEARLAIAIAQEGGI 66

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 ++H    +       + V            +V     +   + ++ +     + 
Sbjct: 67  G-----IIHKNMPISAQAAQVAQVKRFESGIVTDPIVVSPDMTVRSVLELIRQHNISGLP 121

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI--KNPKVILEDTLLTVAMQLLRQHN 313
           VV +G+K+ GI+T  D+   F  +L+   V+++M   K    + E      A+ LL +H 
Sbjct: 122 VV-KGKKVVGIVTNRDLR--FETNLDQ-PVKNIMTPKKRLVTVREGISQEEALALLHKHR 177

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++VD+  +  G++   D+ R
Sbjct: 178 LEKALIVDENFELRGMITVKDITR 201


>gi|30264682|ref|NP_847059.1| thioesterase family protein [Bacillus anthracis str. Ames]
 gi|47530152|ref|YP_021501.1| thioesterase family protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187500|ref|YP_030753.1| thioesterase family protein [Bacillus anthracis str. Sterne]
 gi|49478810|ref|YP_038656.1| CBS domain-containing cytosolic protein [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|65321978|ref|ZP_00394937.1| COG4109: Predicted transcriptional regulator containing CBS domains
           [Bacillus anthracis str. A2012]
 gi|165869654|ref|ZP_02214312.1| thioesterase family protein [Bacillus anthracis str. A0488]
 gi|167633822|ref|ZP_02392145.1| thioesterase family protein [Bacillus anthracis str. A0442]
 gi|167638091|ref|ZP_02396369.1| thioesterase family protein [Bacillus anthracis str. A0193]
 gi|170685771|ref|ZP_02876994.1| thioesterase family protein [Bacillus anthracis str. A0465]
 gi|170705462|ref|ZP_02895926.1| thioesterase family protein [Bacillus anthracis str. A0389]
 gi|177651220|ref|ZP_02934051.1| thioesterase family protein [Bacillus anthracis str. A0174]
 gi|190569036|ref|ZP_03021936.1| thioesterase family protein [Bacillus anthracis Tsiankovskii-I]
 gi|196032742|ref|ZP_03100155.1| thioesterase family protein [Bacillus cereus W]
 gi|218905839|ref|YP_002453673.1| thioesterase family protein [Bacillus cereus AH820]
 gi|228917250|ref|ZP_04080807.1| hypothetical protein bthur0012_44620 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228935920|ref|ZP_04098730.1| hypothetical protein bthur0009_43650 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228948336|ref|ZP_04110619.1| hypothetical protein bthur0007_44620 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|229093708|ref|ZP_04224807.1| hypothetical protein bcere0021_44320 [Bacillus cereus Rock3-42]
 gi|229124178|ref|ZP_04253370.1| hypothetical protein bcere0016_44630 [Bacillus cereus 95/8201]
 gi|229602846|ref|YP_002868891.1| thioesterase family protein [Bacillus anthracis str. A0248]
 gi|254687419|ref|ZP_05151275.1| thioesterase family protein [Bacillus anthracis str. CNEVA-9066]
 gi|254736719|ref|ZP_05194425.1| thioesterase family protein [Bacillus anthracis str. Western North
           America USA6153]
 gi|254741756|ref|ZP_05199443.1| thioesterase family protein [Bacillus anthracis str. Kruger B]
 gi|254754646|ref|ZP_05206681.1| thioesterase family protein [Bacillus anthracis str. Vollum]
 gi|254757478|ref|ZP_05209505.1| thioesterase family protein [Bacillus anthracis str. Australia 94]
 gi|301056115|ref|YP_003794326.1| thioesterase family protein [Bacillus anthracis CI]
 gi|30259357|gb|AAP28545.1| thioesterase family protein [Bacillus anthracis str. Ames]
 gi|47505300|gb|AAT33976.1| thioesterase family protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181427|gb|AAT56803.1| thioesterase family protein [Bacillus anthracis str. Sterne]
 gi|49330366|gb|AAT61012.1| cytosolic protein containing multiple CBS domains [Bacillus
           thuringiensis serovar konkukian str. 97-27]
 gi|164714483|gb|EDR20002.1| thioesterase family protein [Bacillus anthracis str. A0488]
 gi|167513908|gb|EDR89276.1| thioesterase family protein [Bacillus anthracis str. A0193]
 gi|167530623|gb|EDR93325.1| thioesterase family protein [Bacillus anthracis str. A0442]
 gi|170129587|gb|EDS98450.1| thioesterase family protein [Bacillus anthracis str. A0389]
 gi|170670235|gb|EDT20975.1| thioesterase family protein [Bacillus anthracis str. A0465]
 gi|172083046|gb|EDT68108.1| thioesterase family protein [Bacillus anthracis str. A0174]
 gi|190559818|gb|EDV13803.1| thioesterase family protein [Bacillus anthracis Tsiankovskii-I]
 gi|195994171|gb|EDX58126.1| thioesterase family protein [Bacillus cereus W]
 gi|218535078|gb|ACK87476.1| thioesterase family protein [Bacillus cereus AH820]
 gi|228659480|gb|EEL15128.1| hypothetical protein bcere0016_44630 [Bacillus cereus 95/8201]
 gi|228689593|gb|EEL43401.1| hypothetical protein bcere0021_44320 [Bacillus cereus Rock3-42]
 gi|228811323|gb|EEM57661.1| hypothetical protein bthur0007_44620 [Bacillus thuringiensis
           serovar monterrey BGSC 4AJ1]
 gi|228823688|gb|EEM69510.1| hypothetical protein bthur0009_43650 [Bacillus thuringiensis
           serovar andalousiensis BGSC 4AW1]
 gi|228842451|gb|EEM87542.1| hypothetical protein bthur0012_44620 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|229267254|gb|ACQ48891.1| thioesterase family protein [Bacillus anthracis str. A0248]
 gi|300378284|gb|ADK07188.1| thioesterase family protein [Bacillus cereus biovar anthracis str.
           CI]
          Length = 437

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM ++P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|317049173|ref|YP_004116821.1| RpiR family transcriptional regulator [Pantoea sp. At-9b]
 gi|316950790|gb|ADU70265.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
          Length = 279

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 76/178 (42%), Gaps = 5/178 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     ++AEK  +S++ ++L           ++ +K    R+++ GIG SG 
Sbjct: 86  ILSDDPLKVVGEKLLAEK--ISAIRATLDINSEEMLLQTLQLLKNA-NRILLVGIGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  +   D+++ +S++G   E+      A + 
Sbjct: 143 VAKDFSWKLMKIGINAVAEQDMHALLASVQAMAAGDVLLAISYTGERREINLAAQEAAQT 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              ++A T    + +   A   L    E +S     A  +S   QLA+ D L +AL++
Sbjct: 203 GADVLAFTGFTPNTLQQCATHCLYTVAEEQSTR--SAAISSTSAQLALTDLLFMALVQ 258


>gi|153003653|ref|YP_001377978.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027226|gb|ABS24994.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 185

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITE 269
            +G   +              V     + + I ++ E+R   + VV  D+G++L GI TE
Sbjct: 28  HVGRELLRTPLAEVKRGEPVTVAPDATVAEGIALMRERRVSALLVVANDDGRRLAGIFTE 87

Query: 270 GDIF-RNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+  R           +   M ++P+ +     +  A+  +       + +VD   +  
Sbjct: 88  RDLLERALPVPGYAGAPIAQFMTRDPETLHPSDPVAYAVNKMSVGRFRHVPLVDGEGRPA 147

Query: 328 GIVHFLDL 335
           G+    DL
Sbjct: 148 GMFSIRDL 155



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVH 331
           R+  ++L    + +V    P  +  D  +   + L+R+  +S L+VV  DD ++  GI  
Sbjct: 27  RHVGRELLRTPLAEVKRGEPVTVAPDATVAEGIALMRERRVSALLVVANDDGRRLAGIFT 86

Query: 332 FLDLL 336
             DLL
Sbjct: 87  ERDLL 91


>gi|254724982|ref|ZP_05186765.1| thioesterase family protein [Bacillus anthracis str. A1055]
          Length = 437

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM ++P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|116328556|ref|YP_798276.1| signal transduction protein [Leptospira borgpetersenii serovar
           Hardjo-bovis L550]
 gi|116331285|ref|YP_801003.1| signal transduction protein [Leptospira borgpetersenii serovar
           Hardjo-bovis JB197]
 gi|116121300|gb|ABJ79343.1| Signal transduction protein containing cAMP- binding and CBS
           domains [Leptospira borgpetersenii serovar Hardjo-bovis
           L550]
 gi|116124974|gb|ABJ76245.1| Signal transduction protein containing cAMP- binding and CBS
           domains [Leptospira borgpetersenii serovar Hardjo-bovis
           JB197]
          Length = 146

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD---IFRNFHKDLNTLSVEDVM 289
           V+    ++DA+  +++   G V ++ E  KLKGI TE D   +      D    SV +VM
Sbjct: 17  VEPETSVMDAVKFMTKYDIGSVIILTE-GKLKGIFTERDVLHLSAELGLDFFKKSVSEVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +   +  +  +   + ++ +  I  + ++ +    +GIV   D ++  I
Sbjct: 76  STSLTTMTPEDDVDELLSIMLKKRIRHMPIL-EDGLLVGIVSIGDAVKAKI 125


>gi|21673864|ref|NP_661929.1| CBS domain-containing protein [Chlorobium tepidum TLS]
 gi|21646999|gb|AAM72271.1| CBS domain protein [Chlorobium tepidum TLS]
          Length = 653

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 22/188 (11%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAI-------GDALAIALLESRNFSENDFYVLHPGGKLG 214
           +P E         P+ +A    AI         +L+ A+   R+  E        GG L 
Sbjct: 117 IPVETIKELVQSEPSVAAYFTGAIARSVQHIEHSLSEAIDTRRSLMETG------GGSLL 170

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  D + +  +      G P+ +A  I+SE   G + VV E +   GIIT+ D+ +
Sbjct: 171 ANETLVVDQVRNVITCA---PGIPIREAAKIMSENNIGSIIVVAENRHPLGIITDTDLRK 227

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIG 328
                   +N   V ++M      I     +   M L+ +  +    + +D       IG
Sbjct: 228 KVVAIAGQVNERPVSEIMTSPVYTITAGKTVADMMMLMVRTKLRHFCITEDGTADTPVIG 287

Query: 329 IVHFLDLL 336
           I+   D++
Sbjct: 288 IISEHDIV 295



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           TL V+ V  +N         +  A +++ ++NI  ++VV + +  +GI+   DL R  ++
Sbjct: 174 TLVVDQV--RNVITCAPGIPIREAAKIMSENNIGSIIVVAENRHPLGIITDTDL-RKKVV 230


>gi|215487850|ref|YP_002330281.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O127:H6
           str. E2348/69]
 gi|218559432|ref|YP_002392345.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli S88]
 gi|218706009|ref|YP_002413528.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli UMN026]
 gi|306814425|ref|ZP_07448587.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli NC101]
 gi|312965421|ref|ZP_07779653.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 2362-75]
 gi|331664068|ref|ZP_08364978.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA143]
 gi|331673960|ref|ZP_08374723.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA280]
 gi|215265922|emb|CAS10331.1| IMP dehydrogenase [Escherichia coli O127:H6 str. E2348/69]
 gi|218366201|emb|CAR03947.1| IMP dehydrogenase [Escherichia coli S88]
 gi|218433106|emb|CAR14001.1| IMP dehydrogenase [Escherichia coli UMN026]
 gi|222034216|emb|CAP76957.1| Inosine-5'-monophosphate dehydrogenase [Escherichia coli LF82]
 gi|284922455|emb|CBG35542.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 042]
 gi|294491753|gb|ADE90509.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli IHE3034]
 gi|305851819|gb|EFM52271.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli NC101]
 gi|307625939|gb|ADN70243.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli UM146]
 gi|312289841|gb|EFR17729.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli 2362-75]
 gi|312947082|gb|ADR27909.1| inosine 5'-monophosphate dehydrogenase [Escherichia coli O83:H1
           str. NRG 857C]
 gi|320180498|gb|EFW55429.1| Inosine-5'-monophosphate dehydrogenase [Shigella boydii ATCC 9905]
 gi|323949165|gb|EGB45056.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H252]
 gi|323955746|gb|EGB51504.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli H263]
 gi|331059867|gb|EGI31844.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA143]
 gi|331069233|gb|EGI40625.1| inosine-5'-monophosphate dehydrogenase [Escherichia coli TA280]
 gi|332087955|gb|EGI93080.1| inosine-5'-monophosphate dehydrogenase [Shigella boydii 5216-82]
 gi|332089768|gb|EGI94869.1| inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae
           155-74]
          Length = 488

 Score = 86.1 bits (212), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DL +  V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDL-SQPVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|330507414|ref|YP_004383842.1| hypothetical protein MCON_1340 [Methanosaeta concilii GP-6]
 gi|328928222|gb|AEB68024.1| domain of unknown function DUF39/CBS domain fusion protein
           [Methanosaeta concilii GP-6]
          Length = 475

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+  A  ++    F  + VV    +L GIIT  DI +       +  +
Sbjct: 359 MSRDVVTVFEDIPVEKAAKLIISGSFDHLPVVSRDGRLIGIITAWDISKAVASGKPS-RI 417

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++M +    +  D  + +A + L  H+IS L VVD   K IG++    L R 
Sbjct: 418 AEIMTRRVHSVRLDEPIELAARTLDTHSISALPVVDREHKVIGMITSNHLSRL 470



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 30/65 (46%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   +   + +V DVM ++   + ED  +  A +L+   +   L VV    + IGI+   
Sbjct: 344 RPMKQTKESPNVGDVMSRDVVTVFEDIPVEKAAKLIISGSFDHLPVVSRDGRLIGIITAW 403

Query: 334 DLLRF 338
           D+ + 
Sbjct: 404 DISKA 408


>gi|323467483|gb|ADX71170.1| Transcriptional regulator [Lactobacillus helveticus H10]
          Length = 283

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 69/163 (42%), Gaps = 13/163 (7%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITG 71
           V   + +II E    +S+   LQ  LS                 AVE I   +  V I G
Sbjct: 79  VDNKIETIITENDNPTSVLFKLQTNLSKNIVDLGRSIDHKELKQAVELIDKAR-VVFIAG 137

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
            G SG         L  +G    F+ ++  +   +  IT++D++++ S+SG + E   + 
Sbjct: 138 EGASGLAAEDFFDKLIRSGKEVIFIKSSHIALEGITNITKNDVLVIFSYSGMTQEPLLMA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
             AR+    ++ IT E  S +   +DIV++LP   +    G  
Sbjct: 198 KQARKNHAKIVLITREKTSPLRQISDIVISLPTNEKLLRFGAV 240


>gi|307245454|ref|ZP_07527542.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307251351|ref|ZP_07533267.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307254408|ref|ZP_07536246.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258867|ref|ZP_07540599.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306853795|gb|EFM86012.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306856592|gb|EFM88732.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306862707|gb|EFM94663.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306867218|gb|EFM99074.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
          Length = 465

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 19  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 75

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 76  VTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMT 132

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       ++L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 133 PKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 182



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 120 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 179

Query: 273 FRNFHK 278
            +   K
Sbjct: 180 QKAEQK 185


>gi|293375290|ref|ZP_06621572.1| CBS domain protein [Turicibacter sanguinis PC909]
 gi|325842557|ref|ZP_08167728.1| CBS domain protein [Turicibacter sp. HGF1]
 gi|292646046|gb|EFF64074.1| CBS domain protein [Turicibacter sanguinis PC909]
 gi|325489601|gb|EGC91965.1| CBS domain protein [Turicibacter sp. HGF1]
          Length = 153

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 52/103 (50%), Gaps = 2/103 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIKN 292
               +++A  ++ +   G + V+DE  K+ G++T+ DI      D+   +  +ED+M   
Sbjct: 16  PTETVLNASRLMKKHNVGSIPVIDENSKVIGLVTDRDIVIRVFADILPMSTKIEDIMTHP 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              I + + + +A+ L+    +  L VVD  QK +G++   DL
Sbjct: 76  VYTIEQHSEVGLAISLMADKQVRRLPVVDHDQKLVGMISLGDL 118



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+  M    + +     +  A +L+++HN+  + V+D+  K IG+V   D++
Sbjct: 3   VKQFMTDGIEALTPTETVLNASRLMKKHNVGSIPVIDENSKVIGLVTDRDIV 54


>gi|228929659|ref|ZP_04092677.1| hypothetical protein bthur0010_43430 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
 gi|228830046|gb|EEM75665.1| hypothetical protein bthur0010_43430 [Bacillus thuringiensis
           serovar pondicheriensis BGSC 4BA1]
          Length = 437

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM ++P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTRHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|288575114|ref|ZP_06393471.1| CBS domain containing protein [Dethiosulfovibrio peptidovorans DSM
           11002]
 gi|288570855|gb|EFC92412.1| CBS domain containing protein [Dethiosulfovibrio peptidovorans DSM
           11002]
          Length = 876

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 40/106 (37%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + DA  I+       + V      L G+IT  D+ +          VE+ M + 
Sbjct: 321 VDEDSSVNDAYRIMLRYGHSALPVT-RRGDLIGLITRKDLDKAQLHGYGEAMVEEFMTEG 379

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     +  A + +  HNI  L VV      IGIV   DLLR 
Sbjct: 380 VITVSSQASIEEAHRSMITHNIGRLPVV-RNGDLIGIVTRTDLLRA 424



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +A   +     G + VV     L GI+T  D+ R  
Sbjct: 383 VSSQASIEEAHRSMITHNIGRLPVV-RNGDLIGIVTRTDLLRAL 425


>gi|302772022|ref|XP_002969429.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
 gi|300162905|gb|EFJ29517.1| hypothetical protein SELMODRAFT_62607 [Selaginella moellendorffii]
          Length = 426

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V  G  + DA   ++ +R     + +    L GIIT+ D+  R   + L      V  VM
Sbjct: 15  VPDGTSVADACKRMANRRVDAALLTNSSALLCGIITDKDVATRVIAEGLRPEDTPVSKVM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  ++ D+L   A+Q + Q     L VVD+ +    ++  LD+ +
Sbjct: 75  TRNPTFVMSDSLAVDALQKMVQGKFRHLPVVDNGE----VIALLDITK 118



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 45/121 (37%), Gaps = 6/121 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
                 +++    +  V  G  +  A   + E +   V VV  G K  GI+T  D + R 
Sbjct: 168 RPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNSV-VVTVGNKPVGILTSKDVLMRV 226

Query: 276 FHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG---IVH 331
               +   + VE +M  NP+    +  +  A+  +       L V++     +    ++H
Sbjct: 227 VAVGVAADIPVEKIMTTNPECANLEMTIVDALHTMHDGKFLHLPVINKDGHVVSCVDVLH 286

Query: 332 F 332
            
Sbjct: 287 I 287



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 62/200 (31%), Gaps = 57/200 (28%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           +SA++   I D      + +      D     P  K+ T                 V   
Sbjct: 41  SSALLCGIITDKDVATRVIAEGLRPED----TPVSKVMTRNPT------------FVMSD 84

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGI-IT----EGDIF---RNFHKDLNTLSVEDV 288
              +DA+  + + +F  + VVD G+ +  + IT    +  +         +    +VEDV
Sbjct: 85  SLAVDALQKMVQGKFRHLPVVDNGEVIALLDITKCLYDAIVRMERSALKGNAIAAAVEDV 144

Query: 289 ---------------------M-----------IKNPKVILEDTLLTVAMQLLRQHNISV 316
                                M                 +     +  A + +R+  ++ 
Sbjct: 145 ERQWGNTFSGQSNFVETLKERMFRPTLGTLVNENTKVATVAPGDSVFTATKKMRELKVNS 204

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
            +VV    K +GI+   D+L
Sbjct: 205 -VVVTVGNKPVGILTSKDVL 223


>gi|260219992|emb|CBA27084.1| Uncharacterized protein At5g10860, mitochondrial [Curvibacter
           putative symbiont of Hydra magnipapillata]
          Length = 164

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
                +  A+ +L++   G + V+D G KL GI +E D  R      +      V+D+M 
Sbjct: 41  NPDDSVYQALEMLADCNVGALMVMD-GDKLVGIFSERDYTRKIALSGRSSKDTKVKDIMT 99

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V+   T     M L+ Q  I  L VVD   K +G++   DL+
Sbjct: 100 SQVMVVGPKTRTQECMALMSQKKIRHLPVVDGT-KVLGMISIRDLM 144



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G               + +V       + + ++S+K+   + VVD
Sbjct: 73  FSERDYT--RKIALSGRSSKDTKVKDIMTSQVMVVGPKTRTQECMALMSQKKIRHLPVVD 130

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
            G K+ G+I+  D+  +  KD    
Sbjct: 131 -GTKVLGMISIRDLMDDIIKDHEQT 154


>gi|59710752|ref|YP_203528.1| mannose-1-phosphate guanyltransferase [Vibrio fischeri ES114]
 gi|59478853|gb|AAW84640.1| mannose-1-phosphate guanyltransferase [Vibrio fischeri ES114]
          Length = 352

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+K    ++DA+ ++  +      VV++ Q+L G++T+GDI R    +L     V D
Sbjct: 6   KKILIKPESTVVDALRVIDNEALRIALVVNDEQQLLGVVTDGDIRRGLLNNLPLETPVVD 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +M ++P     +T     ++L+   +I  + ++++  K +G+     L    
Sbjct: 66  IMSRSPITASVNTAKEQLVKLMESKSILAVPLMEE-NKVVGLETLHHLFEEK 116



 Score = 36.4 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I  ++ +  A++++    + + +VV+D Q+ +G+V   D+ R G++
Sbjct: 10  IKPESTVVDALRVIDNEALRIALVVNDEQQLLGVVTDGDI-RRGLL 54


>gi|326402860|ref|YP_004282941.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium multivorum
           AIU301]
 gi|325049721|dbj|BAJ80059.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium multivorum
           AIU301]
          Length = 499

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          V+H    +         V      + +
Sbjct: 52  NIPVISAAMDTVTEAPMAIAMAQQGGIG-----VVHKNLSIEDQADQVRQVKKFESGMVV 106

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +A  ++++ R   V VV+ +  +L GI+T  D+            V +
Sbjct: 107 NPLTIHPEQTLAEAQALMAQHRISGVPVVERDTNRLVGILTHRDVRFATDP---AARVYE 163

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N      +    VA  LL +H I  L+VVD+  + +G++   D+ + 
Sbjct: 164 LMTRENLVTAPANVAPEVARSLLHKHRIEKLLVVDEDYRCVGLITVKDMDKA 215


>gi|294632273|ref|ZP_06710833.1| CBS domains protein [Streptomyces sp. e14]
 gi|292835606|gb|EFF93955.1| CBS domains protein [Streptomyces sp. e14]
          Length = 134

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVED--VM 289
           V+    L++A  ++  +  G V VV +GQ++ G++T+ DI  R   + L+  +V    V 
Sbjct: 21  VRPDASLVEAARLMRAQDIGGV-VVADGQEVVGVLTDRDIAVRAVAEGLDPQTVSARAVC 79

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P V+     L  A+ L+R+H++  L VV +    +G+V   DL   
Sbjct: 80  TPDPLVVGPQDPLRAAVTLMREHSVRRLPVV-EDGMPVGMVSLSDLADA 127



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              ++    V DVM      +  D  L  A +L+R  +I  ++V D  Q+ +G++   D+
Sbjct: 1   MAPEVRAELVRDVMTPGVVAVRPDASLVEAARLMRAQDIGGVVVAD-GQEVVGVLTDRDI 59


>gi|255628307|gb|ACU14498.1| unknown [Glycine max]
          Length = 206

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV  D  + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQNNVGALVVVKSDANKAITGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + V+D+    IG+V   D++R 
Sbjct: 133 DIMTEENKLITVTPDTKVLQAMQLMTDNRIRHIPVIDEKGM-IGMVSIGDVVRA 185



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 36/84 (42%), Gaps = 1/84 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+D
Sbjct: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLQAMQLMTDNRIRHIPVID 169

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
           E   + G+++ GD+ R   ++   
Sbjct: 170 EKG-MIGMVSIGDVVRAVVREHRQ 192


>gi|261418831|ref|YP_003252513.1| hypothetical protein GYMC61_1387 [Geobacillus sp. Y412MC61]
 gi|319765647|ref|YP_004131148.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
 gi|261375288|gb|ACX78031.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
 gi|317110513|gb|ADU93005.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
          Length = 148

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 54/125 (43%), Gaps = 5/125 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             ++  +     + +A  I+S+K  G + VV E  ++KG+IT+ DI 
Sbjct: 1   MTNNSGNKVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  KD +T+ V +VM         +  +  A  ++ QH +  L +V +  +  GIV
Sbjct: 60  LRVSSQGKDPSTVKVAEVMTNQVVTGTPNMNVQEAANVMAQHQVRRLPIV-ENNQLQGIV 118

Query: 331 HFLDL 335
              D+
Sbjct: 119 ALGDI 123



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+D+M KN   I  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 8   KVQDIMTKNVATISPNQTVQEAAQIMSQKNIGALPVV-ENGQVKGMITDRDIT 59


>gi|126460086|ref|YP_001056364.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249807|gb|ABO08898.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 126

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 52/116 (44%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-KDLNT 282
           +      +     L +A+ +LS+   G + VVD     K  G+I+E D+ R    K   T
Sbjct: 7   ASRPPITITPDKTLEEAVELLSKHDVGILVVVDRENPRKPIGVISERDVVRALAWKAPLT 66

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++V +V        +  D  L  A + + +H I  ++V++      G++   DLL+
Sbjct: 67  VTVREVATTAGLIYVYVDEPLEEAAKKMEKHRIRHVLVLERSGDLYGVISIRDLLK 122



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +   ++  + P  I  D  L  A++LL +H++ +L+VVD     K IG++   D++R 
Sbjct: 1   MKCGEIASRPPITITPDKTLEEAVELLSKHDVGILVVVDRENPRKPIGVISERDVVRA 58



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 25/64 (39%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                       + +   +  V +  PL +A   + + R   V V++    L G+I+  D
Sbjct: 60  AWKAPLTVTVREVATTAGLIYVYVDEPLEEAAKKMEKHRIRHVLVLERSGDLYGVISIRD 119

Query: 272 IFRN 275
           + ++
Sbjct: 120 LLKH 123


>gi|52079398|ref|YP_078189.1| ABC transporter YhcV [Bacillus licheniformis ATCC 14580]
 gi|52784758|ref|YP_090587.1| YhcV [Bacillus licheniformis ATCC 14580]
 gi|319646821|ref|ZP_08001050.1| YhcV protein [Bacillus sp. BT1B_CT2]
 gi|52002609|gb|AAU22551.1| ABC transporter YhcV [Bacillus licheniformis ATCC 14580]
 gi|52347260|gb|AAU39894.1| YhcV [Bacillus licheniformis ATCC 14580]
 gi|317391409|gb|EFV72207.1| YhcV protein [Bacillus sp. BT1B_CT2]
          Length = 141

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  +     + +A  ++S    G + VVD    LKG+IT+ D  +           
Sbjct: 8   MSRQVATISSNQTVQEAAELMSRHNVGAIPVVD-QGVLKGMITDRDITLRTTAEGQDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  N      +  L  A QL+ Q  I  L +V +    +GI+   DL
Sbjct: 67  PVSNVMTTNVVSGNPNMSLEEASQLMAQSQIRRLPIV-ENNHLVGILALGDL 117



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ + M +    I  +  +  A +L+ +HN+  + VVD      G++   D+ 
Sbjct: 2   TTISNAMSRQVATISSNQTVQEAAELMSRHNVGAIPVVD-QGVLKGMITDRDIT 54


>gi|307256618|ref|ZP_07538398.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864866|gb|EFM96769.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 495

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 134 ARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
                I   A+T ++  +V  H+ +      L  +         P  SA M       LA
Sbjct: 7   IAMLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKEIRLNIPMLSAAMDTVTETKLA 66

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           I+L +     F   +  +     ++  +    S ++        V     L +   ++ +
Sbjct: 67  ISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEPVTVSPDLTLAELAELVKK 123

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAM 306
             F    VVD    L GIIT  D    F +DL T +V  VM        + E       +
Sbjct: 124 NGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMTPKERLVTVKESANREEIL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 181 ELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 212



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 150 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 209

Query: 273 FRNFHK 278
            +   K
Sbjct: 210 QKAEQK 215


>gi|256828366|ref|YP_003157094.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Desulfomicrobium baculatum DSM
           4028]
 gi|256577542|gb|ACU88678.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Desulfomicrobium baculatum DSM
           4028]
          Length = 637

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V  G  +  A   +     G +   +   ++ GIIT+ D+ +     L+     E VM  
Sbjct: 180 VPFGLSIQAAAKEMIRHNTGSLLFREPSGEICGIITDTDLRKAMALGLDLQAPAETVMTT 239

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + I    +   A+  +   NI  L VV    K +G++   D++
Sbjct: 240 PVESIDAGAVCFDALLTMMSKNIHHL-VVKSNNKLLGVISSHDIM 283


>gi|147920793|ref|YP_685401.1| inosine-5\'-monophosphate dehydrogenase [uncultured methanogenic
           archaeon RC-I]
 gi|110620797|emb|CAJ36075.1| inosine-5\'-monophosphate dehydrogenase [uncultured methanogenic
           archaeon RC-I]
          Length = 491

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 61/166 (36%), Gaps = 7/166 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIA+           +        ++  +      ++    + 
Sbjct: 44  NVPLVSAAMDTVTEAEMAIAMAREGGIGVLHRNMSRDRQVEEVRKVKRGEEIIIRDVVTA 103

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                G  +      +S++      ++ E  KL GII+  DI     K      + +VM 
Sbjct: 104 ---SPGQTIESVWRAMSDENVTGFPII-EDGKLVGIISRRDIRPIV-KSEPGKKINEVMT 158

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +N     E   +  A+ ++ +H +  L V+D+    +G++   ++L
Sbjct: 159 RNVVTAAETVTIDEAIDIMYEHKVERLPVIDEKGSLVGMILMQNIL 204


>gi|121593118|ref|YP_985014.1| RpiR family transcriptional regulator [Acidovorax sp. JS42]
 gi|120605198|gb|ABM40938.1| transcriptional regulator, RpiR family [Acidovorax sp. JS42]
          Length = 281

 Score = 85.7 bits (211), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++         +     A E I +      R+   G G SG +           G  
Sbjct: 99  NAVAAFLQYRNAASTNALERAAEAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGIT 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S              ++   D  +++S SG + +L      AR+     IAIT+   S +
Sbjct: 159 SISTSDGHMQVMSATLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPL 217

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A    I L          +  +P  S ++ L I D +A  +     
Sbjct: 218 AHTCRIHLAADHPEGYDRY--SPMVSRLLHLLIIDVVATCVALRIG 261


>gi|289577725|ref|YP_003476352.1| nucleotidyl transferase [Thermoanaerobacter italicus Ab9]
 gi|289527438|gb|ADD01790.1| Nucleotidyl transferase [Thermoanaerobacter italicus Ab9]
          Length = 352

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL 283
                  L+K    + +AI  L+E     + V+D+  +L G +T+GDI R    ++    
Sbjct: 1   MEKIKSVLIKEESLIKEAIKQLNENTLQILLVIDDNYRLIGTVTDGDIRRAILNNISFDE 60

Query: 284 SVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +M + PK   I E+        L+ +H I  + V+D  ++ + ++   +LL
Sbjct: 61  PVGKIMNRVPKFVYIGEEENAKE---LMIKHRIKTIPVLDREKRVVDLILMENLL 112



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 27/43 (62%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           I E++L+  A++ L ++ + +L+V+DD  + IG V   D+ R 
Sbjct: 9   IKEESLIKEAIKQLNENTLQILLVIDDNYRLIGTVTDGDIRRA 51


>gi|91776712|ref|YP_546468.1| signal-transduction protein [Methylobacillus flagellatus KT]
 gi|91710699|gb|ABE50627.1| putative signal-transduction protein with CBS domains
           [Methylobacillus flagellatus KT]
          Length = 142

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA+ +++E   G + VV +  K+ GI +E D  R      K   T +V D+M
Sbjct: 18  VAPESLVYDALLLMAEHHIGAL-VVMQRDKMVGIFSERDYAREVVIKGKTSKTTTVGDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D  +   M L+    I  L V+ + +K +G++   DL++ 
Sbjct: 77  SVQLITVSPDDTVEHCMNLMSGKRIRHLPVL-EGEKLVGLLSIGDLVKE 124


>gi|188025435|ref|ZP_02958590.2| hypothetical protein PROSTU_00338 [Providencia stuartii ATCC 25827]
 gi|188023760|gb|EDU61800.1| hypothetical protein PROSTU_00338 [Providencia stuartii ATCC 25827]
          Length = 343

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 47/184 (25%), Positives = 70/184 (38%), Gaps = 15/184 (8%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIG 73
            AL + I +   L  +   L  E ++             F   V+ I   + RV I GIG
Sbjct: 143 TALHNRITQNDNLMVVAQKLALEKNYSITETTRHIDFKLFEKIVDAIDKSQ-RVQIVGIG 201

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG     L+  L   G  +               +T  D  IV+S++G   ++      
Sbjct: 202 GSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTLTPQDTQIVISFTGKRKDMLTAASI 261

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           AR+    +IAIT    S +A  AD VL    E        +  +S   Q  + D L +AL
Sbjct: 262 ARKQGANVIAITRSRLSPLAQLADYVLESIAEENEWR--SSSISSRTAQNTLTDLLFMAL 319

Query: 194 LESR 197
           L+ R
Sbjct: 320 LQKR 323


>gi|82702329|ref|YP_411895.1| inosine-5'-monophosphate dehydrogenase [Nitrosospira multiformis
           ATCC 25196]
 gi|82410394|gb|ABB74503.1| inosine-5'-monophosphate dehydrogenase [Nitrosospira multiformis
           ATCC 25196]
          Length = 486

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H      +     S+V         
Sbjct: 40  NIPLVSAAMDTVTESRLAIALAQEGGIG-----IIHKNMPAESQAAQVSNVKRFESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + + + ++ + R   + VV EG K+ GI+T  D+   F  +L+   + ++
Sbjct: 95  DPITIPPDMTVREVLNLIHKFRISGLPVV-EGSKVVGIVTNRDLR--FETNLDQ-PIRNI 150

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   +    + E      AM LL ++ +  ++VV++  +  G++   D+++
Sbjct: 151 MTLKERLVTVNEGASREEAMALLHKYRLERVLVVNNDFELRGLITVKDIIK 201


>gi|303248672|ref|ZP_07334926.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
           JJ]
 gi|302489928|gb|EFL49854.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
           JJ]
          Length = 819

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/245 (17%), Positives = 91/245 (37%), Gaps = 28/245 (11%)

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSE--------NKSVVACHADIVLTLPKEP 166
           +I +S    ++ +++ L   R   I  +  T +         + ++   A   L  P+ P
Sbjct: 14  VIAISP---AETMRSALAVMRDRGISCLVATEDGAPVGIVTERDILWAAAHRGLDFPERP 70

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH- 225
                     T     + +     +A    R+    D       G + T     + + H 
Sbjct: 71  VGDVMTAPVITVPADTMLVEAYHLMAQKHLRHLVMVDAAG--KAGGVLTQSDLVAGLEHE 128

Query: 226 -----------SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +        + +A+  ++ +   C+ VV    +  GIITE D+ R
Sbjct: 129 GLTGAKCVADIMTRDVVTAPGNISVREAVRRMASRSISCL-VVAREDRPAGIITERDVVR 187

Query: 275 NFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L  L++ D+M      +  D  +  A  L+++  +  L+VVDD ++ +G+V  
Sbjct: 188 LLADNPRLGRLTLYDIMSCPVVCVEADQPVFEAAMLMKKRRMRRLVVVDDDRRVLGLVTQ 247

Query: 333 LDLLR 337
            D++R
Sbjct: 248 SDIVR 252



 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           +     +  A+ ++ ++   C+ V  E     GI+TE DI         D     V DVM
Sbjct: 17  ISPAETMRSALAVMRDRGISCL-VATEDGAPVGIVTERDILWAAAHRGLDFPERPVGDVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 +  DT+L  A  L+ Q ++  L++VD   KA G++   DL+  G+
Sbjct: 76  TAPVITVPADTMLVEAYHLMAQKHLRHLVMVDAAGKAGGVLTQSDLV-AGL 125



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 28/49 (57%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  V+   P+ +A  ++ ++R   + VVD+ +++ G++T+ DI R   
Sbjct: 207 PVVCVEADQPVFEAAMLMKKRRMRRLVVVDDDRRVLGLVTQSDIVRGLE 255



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + +++  +   I     +  A+ ++R   IS L V  +    +GIV   D+L
Sbjct: 1   MGDRRLAEIVSSDVIAISPAETMRSALAVMRDRGISCL-VATEDGAPVGIVTERDIL 56


>gi|190149908|ref|YP_001968433.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|189915039|gb|ACE61291.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
          Length = 487

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 98  VTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       ++L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 155 PKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 204



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 142 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 201

Query: 273 FRNFHK 278
            +   K
Sbjct: 202 QKAEQK 207


>gi|320539283|ref|ZP_08038953.1| IMP dehydrogenase [Serratia symbiotica str. Tucson]
 gi|320030675|gb|EFW12684.1| IMP dehydrogenase [Serratia symbiotica str. Tucson]
          Length = 487

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      +LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESSLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +  T+ +   F    VV E  +L GIIT  D+   F  DLN   V  VM 
Sbjct: 98  QTVTPATTLQEVKTLTARNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     + +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKARLVTVKEGEAREIVLQKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|307263232|ref|ZP_07544852.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|306871449|gb|EFN03173.1| Inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 495

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/212 (21%), Positives = 78/212 (36%), Gaps = 13/212 (6%)

Query: 134 ARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
                I   A+T ++  +V  H+ +      L  +         P  SA M       LA
Sbjct: 7   IAMLRIKQEALTFDDVLLVPAHSTVLPNTADLSTQLTKEIRLNIPMLSAAMDTVTETKLA 66

Query: 191 IALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           I+L +     F   +  +     ++  +    S ++        V     L +   ++ +
Sbjct: 67  ISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEPVTVSPDLTLAELAELVKK 123

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAM 306
             F    VVD    L GIIT  D    F +DL T +V  VM        + E       +
Sbjct: 124 NGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMTPKERLVTVKESANREEIL 180

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 181 ELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 212



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 150 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 209

Query: 273 FRNFHK 278
            +   K
Sbjct: 210 QKAEQK 215


>gi|255574194|ref|XP_002528012.1| conserved hypothetical protein [Ricinus communis]
 gi|223532581|gb|EEF34368.1| conserved hypothetical protein [Ricinus communis]
          Length = 546

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  +M
Sbjct: 72  IPEGTTVSDACRRMAARRVDAVLLTDANALLSGIVTDKDISARVIAEGLRPEQTIVSKIM 131

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 132 TRNPIFVASDSLAIDALQKMVQGKFRHLPVVENGE----VIALLDITK 175



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +     P+  A   + + +   V +V  G K++GI+T  D + R    +
Sbjct: 229 STIIGEQTKVAIASPSDPVYVAAKRMRDLQVNSVIIV-TGNKIQGILTSKDILMRVVAHN 287

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           ++     VE VM  NP+    +T +  A+ ++       L VVD   
Sbjct: 288 ISPELTLVEKVMTSNPECATLETTILDALHIMHDGKFLHLPVVDKDG 334


>gi|149239558|ref|XP_001525655.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
           YB-4239]
 gi|146451148|gb|EDK45404.1| hypothetical protein LELG_03583 [Lodderomyces elongisporus NRRL
           YB-4239]
          Length = 652

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
             +     K    + +   ++  +R  CV VV E   L GI T  D+  R     LN   
Sbjct: 53  KPNEPITCKATATVYEVSQLMIARRENCVLVVGEEGDLMGIFTAKDLAFRVVGAGLNAGN 112

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++  +M  NP   +E+   + A+ L+       L V ++ Q+ +GI+   + 
Sbjct: 113 VTINKIMTPNPICTMENNPASDALTLMVDKGFRHLPVKNELQQVVGILDITNC 165



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 40/105 (38%), Gaps = 3/105 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNF 276
                V+    +   V +   +++A  ++ E     V V D  ++L GI T  D + R  
Sbjct: 217 PTLETVLDEQTAPIYVSVKATVLEATVLMKENNTTAVLVKDTNEELTGIFTSKDVVLRVI 276

Query: 277 HKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              L     SV  VM   P V   +  +  A++ +   +   L V
Sbjct: 277 AAGLEPKQCSVVRVMTPQPDVANANLPIQQALRQMFNGHYLNLPV 321



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 38/253 (15%), Positives = 80/253 (31%), Gaps = 64/253 (25%)

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I  + R     ++++  +    + C A           S           ++    GD +
Sbjct: 38  IARHKRPMPGTVLSL--KPNEPITCKATAT----VYEVSQLMIARRENCVLVVGEEGDLM 91

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
            I       F+  D      G  L    V  + +M       +     P  DA+T++ +K
Sbjct: 92  GI-------FTAKDLAFRVVGAGLNAGNVTINKIMTPNPICTM--ENNPASDALTLMVDK 142

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL------------SVEDVMI------- 290
            F  + V +E Q++ GI+   DI   + + +  L            +++ V         
Sbjct: 143 GFRHLPVKNELQQVVGIL---DITNCYAQQMEKLERMHNSSKKLYEALDSVQTEIGLKQH 199

Query: 291 ---------------------------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                                        P  +     +  A  L++++N + ++V D  
Sbjct: 200 PQQVFEYFEKLRSKMNGPTLETVLDEQTAPIYVSVKATVLEATVLMKENNTTAVLVKDTN 259

Query: 324 QKAIGIVHFLDLL 336
           ++  GI    D++
Sbjct: 260 EELTGIFTSKDVV 272


>gi|82777893|ref|YP_404242.1| inosine 5'-monophosphate dehydrogenase [Shigella dysenteriae Sd197]
 gi|309784741|ref|ZP_07679374.1| inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae 1617]
 gi|81242041|gb|ABB62751.1| IMP dehydrogenase [Shigella dysenteriae Sd197]
 gi|308927111|gb|EFP72585.1| inosine-5'-monophosphate dehydrogenase [Shigella dysenteriae 1617]
          Length = 488

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L+GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELEGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDEFHLIGMITVKDFQKA 204


>gi|53717172|ref|YP_105966.1| CBS domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|53721906|ref|YP_110891.1| hypothetical protein BPSS0882 [Burkholderia pseudomallei K96243]
 gi|67643288|ref|ZP_00442035.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|76818563|ref|YP_337630.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|121597823|ref|YP_989945.1| CBS domain-containing protein [Burkholderia mallei SAVP1]
 gi|124381836|ref|YP_001024428.1| CBS domain-containing protein [Burkholderia mallei NCTC 10229]
 gi|126443222|ref|YP_001062287.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
 gi|126445993|ref|YP_001078149.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
 gi|126457700|ref|YP_001075253.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
 gi|134278834|ref|ZP_01765547.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|167000166|ref|ZP_02265986.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|167723227|ref|ZP_02406463.1| CBS domain protein [Burkholderia pseudomallei DM98]
 gi|167742198|ref|ZP_02414972.1| CBS domain protein [Burkholderia pseudomallei 14]
 gi|167819373|ref|ZP_02451053.1| CBS domain protein [Burkholderia pseudomallei 91]
 gi|167827746|ref|ZP_02459217.1| CBS domain protein [Burkholderia pseudomallei 9]
 gi|167849220|ref|ZP_02474728.1| CBS domain protein [Burkholderia pseudomallei B7210]
 gi|167897818|ref|ZP_02485220.1| CBS domain protein [Burkholderia pseudomallei 7894]
 gi|167906163|ref|ZP_02493368.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167914486|ref|ZP_02501577.1| CBS domain protein [Burkholderia pseudomallei 112]
 gi|167922385|ref|ZP_02509476.1| CBS domain protein [Burkholderia pseudomallei BCC215]
 gi|217418559|ref|ZP_03450066.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|226197756|ref|ZP_03793331.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237509954|ref|ZP_04522669.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|242313105|ref|ZP_04812122.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|254174393|ref|ZP_04881055.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|254183336|ref|ZP_04889928.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|254189969|ref|ZP_04896478.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254193127|ref|ZP_04899562.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|254200811|ref|ZP_04907176.1| CBS domain protein [Burkholderia mallei FMH]
 gi|254204781|ref|ZP_04911134.1| CBS domain protein [Burkholderia mallei JHU]
 gi|254263370|ref|ZP_04954235.1| CBS domain protein [Burkholderia pseudomallei 1710a]
 gi|254300236|ref|ZP_04967682.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|254357030|ref|ZP_04973305.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|52212320|emb|CAH38344.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52423142|gb|AAU46712.1| CBS domain protein [Burkholderia mallei ATCC 23344]
 gi|76583036|gb|ABA52510.1| CBS domain protein [Burkholderia pseudomallei 1710b]
 gi|121225621|gb|ABM49152.1| CBS domain protein [Burkholderia mallei SAVP1]
 gi|124289856|gb|ABM99125.1| CBS domain protein [Burkholderia mallei NCTC 10229]
 gi|126222713|gb|ABN86218.1| CBS domain protein [Burkholderia pseudomallei 668]
 gi|126231468|gb|ABN94881.1| CBS domain protein [Burkholderia pseudomallei 1106a]
 gi|126238847|gb|ABO01959.1| CBS domain protein [Burkholderia mallei NCTC 10247]
 gi|134249253|gb|EBA49334.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|147748423|gb|EDK55498.1| CBS domain protein [Burkholderia mallei FMH]
 gi|147754367|gb|EDK61431.1| CBS domain protein [Burkholderia mallei JHU]
 gi|148026057|gb|EDK84180.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|157809884|gb|EDO87054.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|157937646|gb|EDO93316.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160695439|gb|EDP85409.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|169649881|gb|EDS82574.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|184213869|gb|EDU10912.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|217397863|gb|EEC37878.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|225930365|gb|EEH26377.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|235002159|gb|EEP51583.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|238524599|gb|EEP88031.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|242136344|gb|EES22747.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|243063818|gb|EES46004.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|254214372|gb|EET03757.1| CBS domain protein [Burkholderia pseudomallei 1710a]
          Length = 154

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I +V+    + +AI +++EK  G + V+D    + GI+TE D  R      +    
Sbjct: 15  SGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMDGAN-IAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K +G+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD-GKLVGLVSIGDLVK 127



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 114 -GKLVGLVSIGDLVKSVIAD 132


>gi|119872825|ref|YP_930832.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674233|gb|ABL88489.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 144

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 55/116 (47%), Gaps = 1/116 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
             +  ++K    +++AI ++++   G + +VD   +  G+I+E  + +     +      
Sbjct: 8   RKNPIVLKHDGTILEAIQLMAKHNVGVLPIVDGEGRPLGVISERHVIKALAAGVPLDRPA 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            +V  +    ++ D  +  A+  +R+  +  ++VVD   + IG++   D +R  ++
Sbjct: 68  LEVARRELVTVMPDANVYDALLEMRRRGVRHVLVVDRDGRLIGVLSIRDFMREDVL 123


>gi|115455195|ref|NP_001051198.1| Os03g0737000 [Oryza sativa Japonica Group]
 gi|29788876|gb|AAP03422.1| unknown protein [Oryza sativa Japonica Group]
 gi|32352166|dbj|BAC78576.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|37999993|gb|AAR07080.1| unknown protein [Oryza sativa Japonica Group]
 gi|108710961|gb|ABF98756.1| CBS domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|108710962|gb|ABF98757.1| CBS domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|108710963|gb|ABF98758.1| CBS domain containing protein, expressed [Oryza sativa Japonica
           Group]
 gi|113549669|dbj|BAF13112.1| Os03g0737000 [Oryza sativa Japonica Group]
 gi|215692663|dbj|BAG88083.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 205

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 73  WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 133 DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 185



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  VK    ++ A+ +++EKR   + V+D 
Sbjct: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDG 170

Query: 260 GQKLKGIITEGDIFRNF 276
              + G+++ GDI R  
Sbjct: 171 TG-MVGMVSIGDIVRAV 186


>gi|240949036|ref|ZP_04753390.1| inositol-5'-monophosphate dehydrogenase [Actinobacillus minor
           NM305]
 gi|240296623|gb|EER47241.1| inositol-5'-monophosphate dehydrogenase [Actinobacillus minor
           NM305]
          Length = 488

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---TEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD+   L GIIT  D    F +DL+   V  VM 
Sbjct: 99  VTVSPELTLGELAELVKKNGFAGYPVVDKEGNLVGIITGRDTR--FVRDLSK-PVSKVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       + L+ +H +  +++VDD  K  G++   D  + 
Sbjct: 156 PKERLVTVKEHATREEILDLMHEHRVEKVLMVDDSFKLKGMITVKDFQKA 205



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    S VM   + +  VK      + + ++ E R   V +VD+  KLKG+IT  D 
Sbjct: 143 VRDLSKPVSKVMTPKERLVTVKEHATREEILDLMHEHRVEKVLMVDDSFKLKGMITVKDF 202

Query: 273 FRNFHK 278
            +   K
Sbjct: 203 QKAEQK 208


>gi|126208075|ref|YP_001053300.1| inosine 5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae L20]
 gi|126096867|gb|ABN73695.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
          Length = 487

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 98  VTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       ++L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 155 PKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 204



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 142 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 201

Query: 273 FRNFHK 278
            +   K
Sbjct: 202 QKAEQK 207


>gi|328954414|ref|YP_004371748.1| putative signal transduction protein with CBS domains [Desulfobacca
           acetoxidans DSM 11109]
 gi|328454738|gb|AEB10567.1| putative signal transduction protein with CBS domains [Desulfobacca
           acetoxidans DSM 11109]
          Length = 426

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 29/160 (18%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                         SD+M    +   V    P+ + I ++       V VVD+     G+
Sbjct: 265 FQKQKINVENLRFVSDIMRRETTT--VLPETPVEEVIRLIDCGDIQRVCVVDQQGNFLGL 322

Query: 267 ITEGDIF---------------------------RNFHKDLNTLSVEDVMIKNPKVILED 299
           I++ D+                            ++  + L   +  +VM  +   I ED
Sbjct: 323 ISDRDLLVAFADRHPGIWDYFVSKLPFTERRRRHKHLQRHLEVKTASEVMNTHIITIEED 382

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             +  A++L+ ++ I  L V+D   K  G+V    LLR G
Sbjct: 383 APINEAIRLMLENCIKRLPVLDAQGKFKGMVSREALLRTG 422



 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 49/130 (37%), Gaps = 20/130 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------FR---- 274
                  V +   L +   +L    F  + VVD  +   G+I++ D+        R    
Sbjct: 122 MTLQPRKVNLETSLAEVTRLLLSSTFTGLPVVDAEKHPVGVISQTDLIYKAGMPMRLGLL 181

Query: 275 ---------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                       + L +    ++M K    I ++  +T A+ L+ +  +  L VVD   K
Sbjct: 182 SESADEKVDAVLEALGSRQAREIMTKPAVTIGQEQRVTEAVNLMLEKKVKRLPVVDAEGK 241

Query: 326 AIGIVHFLDL 335
            +G +  +D+
Sbjct: 242 LVGNLSRVDI 251



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/143 (18%), Positives = 53/143 (37%), Gaps = 14/143 (9%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                +                   +     + +A+ ++ EK+   + VVD   KL G +
Sbjct: 187 EKVDAVLEALGSRQAREIMTKPAVTIGQEQRVTEAVNLMLEKKVKRLPVVDAEGKLVGNL 246

Query: 268 TEGDIFRNFHKDLNTLS--------------VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +  DIF +  ++                   V D+M +    +L +T +   ++L+   +
Sbjct: 247 SRVDIFHSILRECPDWQTFQKQKINVENLRFVSDIMRRETTTVLPETPVEEVIRLIDCGD 306

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I  + VVD     +G++   DLL
Sbjct: 307 IQRVCVVDQQGNFLGLISDRDLL 329



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFG 339
               V ++M   P+ +  +T L    +LL     + L VVD  +  +G++   DL+ + G
Sbjct: 114 RQTQVRELMTLQPRKVNLETSLAEVTRLLLSSTFTGLPVVDAEKHPVGVISQTDLIYKAG 173



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/69 (17%), Positives = 25/69 (36%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                  L       +        I  ++   P+ +AI ++ E     + V+D   K KG
Sbjct: 352 RRRRHKHLQRHLEVKTASEVMNTHIITIEEDAPINEAIRLMLENCIKRLPVLDAQGKFKG 411

Query: 266 IITEGDIFR 274
           +++   + R
Sbjct: 412 MVSREALLR 420


>gi|313673776|ref|YP_004051887.1| cbs domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940532|gb|ADR19724.1| CBS domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 222

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 13/121 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  ++    ++DA+ ++ E +   + V  +G+KL GIITE DI             
Sbjct: 7   MTTELITIEPDDTVLDALHVMRENKLRRIPV-AKGKKLLGIITEKDIKTFSPSKASTLDI 65

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L    V+DVM KNP  +  D  +  A  +LR   I  L VVD+  + +GI+  +
Sbjct: 66  YEMHNILADTLVKDVMTKNPINVAPDDPIEKAALILRDKRIGGLPVVDEKGELVGIITAI 125

Query: 334 D 334
           D
Sbjct: 126 D 126



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+D M      I  D  +  A+ ++R++ +  + V    +K +GI+   D+
Sbjct: 3   VKDWMTTELITIEPDDTVLDALHVMRENKLRRIPVA-KGKKLLGIITEKDI 52



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 7/81 (8%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-------VKIGCPLIDAITILSEKRF 251
            +E D     P            +++       +       V    P+  A  IL +KR 
Sbjct: 47  ITEKDIKTFSPSKASTLDIYEMHNILADTLVKDVMTKNPINVAPDDPIEKAALILRDKRI 106

Query: 252 GCVAVVDEGQKLKGIITEGDI 272
           G + VVDE  +L GIIT  D+
Sbjct: 107 GGLPVVDEKGELVGIITAIDV 127


>gi|310764809|gb|ADP09759.1| putative DNA-binding transcriptional regulator [Erwinia sp. Ejp617]
          Length = 279

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 5/179 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     +  EK   S++ ++L      +    +  +K  + R+V+ G+G SG 
Sbjct: 86  ILSDDALKVVGEKLFTEKT--SAIRATLDINSEERLLETLRLLKQAR-RIVLIGVGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  ++  D+++ +S++G   E+      ARR 
Sbjct: 143 VAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERREINLAAQEARRI 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              ++A T    + +   A+  L    E ++     A  +S   QLA+ D L +AL++ 
Sbjct: 203 GATVLAFTGFTPNTLQQSANHCLYTVAEEQTTR--SAAISSTTAQLALTDLLFMALIQR 259


>gi|254380671|ref|ZP_04996037.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194339582|gb|EDX20548.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 208

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G P  +   +L E     V VVDE ++  G+++E D+ R         +   +M   
Sbjct: 17  VQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRKRSSGSGANTAAALMTSP 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  A +++R H +  L VVD   + IGI+   DLL+ 
Sbjct: 77  AITARTEWSVVRAARVMRGHQVKRLPVVDAAGQLIGILSRSDLLQL 122



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   SV D+M      +   T      +LL++ +IS + VVD+ ++ +G+V   DLLR 
Sbjct: 1   MRHRSVADLMTPTAVSVQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRK 59


>gi|167031246|ref|YP_001666477.1| CBS domain-containing protein [Pseudomonas putida GB-1]
 gi|166857734|gb|ABY96141.1| CBS domain containing protein [Pseudomonas putida GB-1]
          Length = 145

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 8/128 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 ++ +      V        ++DA+ +L+EK  G + VV EG ++ GI++E D  
Sbjct: 1   MKTVEQILKTKSQHQTVYTIGPDDSVLDALKMLAEKNVGALPVV-EGNQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VVD+  K +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVEPKQKLDFCMNLMTDRHLRHLPVVDN-GKLLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|332800077|ref|YP_004461576.1| RpiR family transcriptional regulator [Tepidanaerobacter sp. Re1]
 gi|332697812|gb|AEE92269.1| transcriptional regulator, RpiR family [Tepidanaerobacter sp. Re1]
          Length = 283

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 62/179 (34%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  +   + I +    +  L   L           V  I     RV+  G+G SG I 
Sbjct: 92  NDSIEEIKNKVIYSTNTSIQDLADILP---DNAIESVVNLICNA-NRVLFFGVGASGAIA 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G    F + +             DLI  +S SG S E+   +  A++   
Sbjct: 148 YDAFHKFLRIGLNVSFCNDSHIMSIQGSQTKNKDLIFAISHSGESKEILDAVEIAKKNKA 207

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +++ITS   S +A  +D +L                 S I+QL I D L I L+    
Sbjct: 208 KVVSITSYPNSTLAKMSDELLLSSTSERKYRSDA--MVSRIVQLVIIDILYIILVLKYG 264


>gi|322613747|gb|EFY10686.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619510|gb|EFY16386.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322625015|gb|EFY21844.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629542|gb|EFY26318.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322634027|gb|EFY30764.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322635535|gb|EFY32246.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322639890|gb|EFY36567.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644412|gb|EFY40953.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649135|gb|EFY45575.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322655224|gb|EFY51533.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658271|gb|EFY54537.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322664272|gb|EFY60469.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322669439|gb|EFY65588.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322673166|gb|EFY69272.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676558|gb|EFY72626.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322683308|gb|EFY79322.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322685806|gb|EFY81799.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323192518|gb|EFZ77747.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199563|gb|EFZ84654.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323204662|gb|EFZ89660.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323208110|gb|EFZ93055.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323210166|gb|EFZ95067.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217033|gb|EGA01755.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323219226|gb|EGA03722.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323225453|gb|EGA09684.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229278|gb|EGA13402.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323235407|gb|EGA19491.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323237407|gb|EGA21470.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323245161|gb|EGA29162.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323248864|gb|EGA32790.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323253152|gb|EGA36984.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255385|gb|EGA39153.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323260591|gb|EGA44201.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266367|gb|EGA49855.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269802|gb|EGA53252.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
          Length = 488

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 204


>gi|118162023|gb|ABK64186.1| CBS domain-containing protein [Solenostemon scutellarioides]
          Length = 202

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 70  WCTTDDSVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVG 129

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + VV++    IG+V   D++R 
Sbjct: 130 DIMTEENKLITVTPDTKVLKAMQLMTDNRIRHIPVVNEGGM-IGMVSIGDVVRA 182



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 37/84 (44%), Gaps = 1/84 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + VV+
Sbjct: 107 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLKAMQLMTDNRIRHIPVVN 166

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
           EG  + G+++ GD+ R   ++   
Sbjct: 167 EGG-MIGMVSIGDVVRAVVREHRE 189


>gi|119715234|ref|YP_922199.1| CBS domain-containing protein [Nocardioides sp. JS614]
 gi|119535895|gb|ABL80512.1| CBS domain containing protein [Nocardioides sp. JS614]
          Length = 196

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  V+    +  A++ L+E    C+ VVD   +L+G+++E D+ R           
Sbjct: 7   MTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIRDVVAPDPRAQE 66

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                       +VE+V  ++P  +  +  L  A+ ++    +  L VVDD  + +G+V 
Sbjct: 67  RPVTIEPVFPPRTVEEVYTRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVS 126

Query: 332 FLDLLR 337
             D+++
Sbjct: 127 RSDVVQ 132



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+D+M   P  +   T +  A+  L +  I+ L VVD   +  G+V   DL+R
Sbjct: 3   VQDLMTPEPMTVRPSTTVKAALSRLAEFGITCLPVVDGAGRLQGVVSEADLIR 55



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V+    L  A+ +++      + VVD+  +L G+++  D+ +   +  + +   
Sbjct: 85  TRHPVSVRRNDDLARAVDVMTSTAVKSLPVVDDEGRLVGVVSRSDVVQVLAR-ADDVIAA 143

Query: 287 DV 288
           D+
Sbjct: 144 DI 145


>gi|300742005|ref|ZP_07072026.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa M567]
 gi|300381190|gb|EFJ77752.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa M567]
          Length = 505

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 70/213 (32%), Gaps = 23/213 (10%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDAL 189
           A+T +         D VL LP   +  P                 P  SA M       +
Sbjct: 6   ALTDDPFGFTGLTYDDVLLLPGNTDVIPSDADTSTRLSKRITLGTPIISAAMDTVTDSQM 65

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITI 245
           AI++            V+H    +         V  S   + +          + +   +
Sbjct: 66  AISMARLGG-----MGVIHRNLSIEDQAAHVDRVKRSESGMIINPVTIGADATIGEYDNL 120

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTV 304
               +   + VV E  KL+GIIT  DI      D     V DVM   P      +     
Sbjct: 121 CGYYKVSGLPVVTEDGKLEGIITNRDIRYLSRSDYENTLVRDVMTPMPLITGSPNLTKDE 180

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A  LL ++ I  L ++D+  K  G++   D ++
Sbjct: 181 AFALLSKNKIERLPLIDEAGKLAGLITLKDFVK 213


>gi|229544281|ref|ZP_04433340.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
 gi|229325420|gb|EEN91096.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
          Length = 153

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 57/138 (41%), Gaps = 26/138 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  VK    + + + +L+  R G V VVD   KL G+I++GD+ R           
Sbjct: 7   MIRDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRFLQPKARTVYD 66

Query: 277 ---------HKDLN-------TLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMV 319
                     +D N          VE +M +     +  +     A+++L +H+   L V
Sbjct: 67  FYITIVVNEQEDFNEKLVHSLDFPVEKIMKRRELYTVRPEDDFENALRILAKHHFKKLPV 126

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V+   + +G++   D++R
Sbjct: 127 VNQAGRVVGVISRGDIMR 144



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D MI++   + ++T +   +++L  H I  + VVD   K +G++   D++RF
Sbjct: 3   VKDFMIRDVITVKKETTIRELLKVLAHHRIGGVPVVDAEGKLLGMISDGDVIRF 56



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +     +  V+      +A+ IL++  F  + VV++  ++ G+I+ GDI R     L  
Sbjct: 94  IMKRRELYTVRPEDDFENALRILAKHHFKKLPVVNQAGRVVGVISRGDIMRQITDKLLN 152


>gi|154507797|ref|ZP_02043439.1| hypothetical protein ACTODO_00279 [Actinomyces odontolyticus ATCC
           17982]
 gi|153797431|gb|EDN79851.1| hypothetical protein ACTODO_00279 [Actinomyces odontolyticus ATCC
           17982]
          Length = 507

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            +LH    +         V  S     +
Sbjct: 47  RIPLLSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIEEQAAQVRQVKRSESGMVE 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +  ++    R   + VV+E   L GIIT  D+      +  TL V D 
Sbjct: 102 DPVTVGPDATIDELDSLCGHYRVSGLPVVNEDGTLLGIITNRDLRFVPQDEWATLRVRDC 161

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M       V         A  LL +H +  L +VDD     G++   D ++
Sbjct: 162 MTPRDQLVVGQVGISREHAKHLLAEHRVEKLPIVDDNDHLTGLITVKDFVK 212


>gi|148260198|ref|YP_001234325.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium cryptum JF-5]
 gi|146401879|gb|ABQ30406.1| inosine-5'-monophosphate dehydrogenase [Acidiphilium cryptum JF-5]
          Length = 499

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+ +          V+H    +         V      + +
Sbjct: 52  NIPVISAAMDTVTEAPMAIAMAQQGGIG-----VVHKNLSIEDQADQVRQVKKFESGMVV 106

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +     L +A  ++++ R   V VV+ +  +L GI+T  D+            V +
Sbjct: 107 NPLTIHPEQTLAEAQALMAQHRISGVPVVERDTNRLVGILTHRDVRFATDP---AARVYE 163

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M + N      +    VA  LL +H I  L+VVD+  + +G++   D+ + 
Sbjct: 164 LMTRENLVTAPANVAPEVARSLLHKHRIEKLLVVDEDYRCVGLITVKDMDKA 215


>gi|323699565|ref|ZP_08111477.1| CBS domain containing protein [Desulfovibrio sp. ND132]
 gi|323459497|gb|EGB15362.1| CBS domain containing protein [Desulfovibrio desulfuricans ND132]
          Length = 225

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 14/116 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------------HKDLNT 282
              ++DA  IL EK      V+D    L GI+++ DI                    L T
Sbjct: 17  NSSVLDAAEILREKNIRQFPVIDSAGSLVGIVSDRDIRDAMPSKFIPGDAVVESGGGLYT 76

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+  D+M  +P  +  D  +T    LL +H +  L VVD   +  GI+  LD+LRF
Sbjct: 77  LTAGDIMTLDPISVPSDAAMTEVADLLVKHKVGGLPVVD-GGRLEGIITQLDVLRF 131



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  N   +  ++ +  A ++LR+ NI    V+D     +GIV   D+
Sbjct: 3   VRDWMTVNVIALGVNSSVLDAAEILREKNIRQFPVIDSAGSLVGIVSDRDI 53



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +   +L + + G + VVD G +L+GIIT+ D+ R  
Sbjct: 90  VPSDAAMTEVADLLVKHKVGGLPVVD-GGRLEGIITQLDVLRFL 132


>gi|307719578|ref|YP_003875110.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
 gi|306533303|gb|ADN02837.1| CBS domain containing protein [Spirochaeta thermophila DSM 6192]
 gi|315186619|gb|EFU20378.1| CBS domain containing membrane protein [Spirochaeta thermophila DSM
           6578]
          Length = 214

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 56/124 (45%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   V     L DA  ++  ++   + V+DE  ++ GI++E D+             
Sbjct: 7   MTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLLYASPSPATTLNV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               + L+ + +++VM      + EDT +  A +++  +NI  L VV   +K +GI+   
Sbjct: 67  YEMAQLLSKVRIKEVMRTPVITVTEDTYIEDAARIMVDNNIGGLPVV-RGEKLVGIITES 125

Query: 334 DLLR 337
           D+ +
Sbjct: 126 DIFK 129



 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V  VM  NP  +   T L+ A +L+R+  I  L V+D+  + +GIV   DLL
Sbjct: 1   MKVAQVMTHNPVTVTPATTLSDAQELMRREKIHRLPVIDEKGRVVGIVSEKDLL 54



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                      +  V     + DA  I+ +   G + VV  G+KL GIITE DIF+ F
Sbjct: 75  KVRIKEVMRTPVITVTEDTYIEDAARIMVDNNIGGLPVV-RGEKLVGIITESDIFKRF 131


>gi|254786576|ref|YP_003074005.1| CBS domain containing protein [Teredinibacter turnerae T7901]
 gi|237687236|gb|ACR14500.1| CBS domain containing protein [Teredinibacter turnerae T7901]
          Length = 141

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              ++  V     L +   I +E  +  + V ++   L GI+++ D+             
Sbjct: 7   MSKTVHTVSPEETLAELRNIFAEVHYHHLLV-EQDDLLVGIVSDRDVLAHLSPFAGTEQE 65

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   ++L  L+V D+M  +   I  DTL+  A  LL +++IS L VVD+  + +GI+ + 
Sbjct: 66  RACDRNLLELTVRDIMSDSIITIDPDTLIDCASILLLENHISCLPVVDESNRIVGILSWK 125

Query: 334 DLLRF 338
           D+L++
Sbjct: 126 DILQY 130



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 22/52 (42%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M K    +  +  L     +  + +   L+V +     +GIV   D+L
Sbjct: 3   VSDIMSKTVHTVSPEETLAELRNIFAEVHYHHLLV-EQDDLLVGIVSDRDVL 53


>gi|152975448|ref|YP_001374965.1| RpiR family transcriptional regulator [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152024200|gb|ABS21970.1| transcriptional regulator, RpiR family [Bacillus cytotoxicus NVH
           391-98]
          Length = 284

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H            ++  V  A +   +   GL      L  E       A+  ++  K R
Sbjct: 80  HTPMQNIHEEVSAEDDMVTVAKKVFHSHITGLQDTLHLLNEE---ALEEAIHILQLAK-R 135

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +   G G SG I          TG        +       G++T + ++I +S SGS+  
Sbjct: 136 IEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLLTTEAVVIAISHSGSNKA 195

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   L  A+     +IAITS  KS ++  ADI L             +  +S + QL++ 
Sbjct: 196 LLEALEVAKTKGARIIAITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLL 253

Query: 187 DALAIALLESR 197
           D L + L   R
Sbjct: 254 DTLYVGLSMQR 264


>gi|167631117|ref|YP_001681616.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
 gi|167593857|gb|ABZ85605.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
          Length = 142

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    +I+A  I+     G V VV EGQK  GIIT+ DI  R   K  D    +++  M
Sbjct: 15  VRPDETIIEAAKIMMRLNVGAVPVV-EGQKCVGIITDRDIVLRVVAKGMDPRGTTIQSAM 73

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K+P     D  +  A  L+    I  L ++++  + +GIV   DL
Sbjct: 74  TKDPITGTPDMDIHAAADLMSDRQIRRLPIIEND-RLVGIVSLGDL 118



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + ++M ++   +  D  +  A +++ + N+  + VV + QK +GI+   D++
Sbjct: 3   PLREIMTRSVSAVRPDETIIEAAKIMMRLNVGAVPVV-EGQKCVGIITDRDIV 54


>gi|159479170|ref|XP_001697671.1| hypothetical protein CHLREDRAFT_185012 [Chlamydomonas reinhardtii]
 gi|158274281|gb|EDP00065.1| predicted protein [Chlamydomonas reinhardtii]
          Length = 197

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 27/160 (16%), Positives = 56/160 (35%), Gaps = 28/160 (17%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             + P      L +     + S  ++  V     +  A+ IL   R   + V+D   ++ 
Sbjct: 23  RRVVPRAASTELSLSTVKDVMSSGTLYSVSPEDTVDAALEILVNNRITGLPVLDTEGRVV 82

Query: 265 GIITEGDIF----------------------------RNFHKDLNTLSVEDVMIKNPKVI 296
           G++++ D+                             +          ++DVM   P  +
Sbjct: 83  GVVSDFDLLALDAVGRVNDDNMLFPSAEQSWQAFKEVKKMLAKTAGKKIKDVMTPKPITV 142

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +T L  A  +L    I  L VVD+  K +G++   +++
Sbjct: 143 RPETNLNDATSILISKKIRRLPVVDEHGKLVGLISRGNIV 182


>gi|254796884|ref|YP_003081721.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str.
           Illinois]
 gi|254590120|gb|ACT69482.1| inosine-5'-monophosphate dehydrogenase [Neorickettsia risticii str.
           Illinois]
          Length = 481

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 19/170 (11%)

Query: 174 APTTSAIMQLAIGDALAIALLES-------RNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  S+ M +     LAI L +        RN +     +     K+             
Sbjct: 38  VPIVSSAMDMVTEARLAICLAKHGGIGIIHRNMTPEAQALE--IRKVKKYESWIVSD--- 92

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V     L     +  +  +  + VVDE  KL GI+T  D+   F +D  +  V 
Sbjct: 93  ---PVTVSPDDRLEKISALKRQHGYSGLPVVDEKNKLIGILTNRDVR--FVED-GSRKVS 146

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++M  KN   + E      A  L  +H I  L+VVD+  + +G++   D+
Sbjct: 147 ELMTTKNLITVKEGITYDEARLLFHKHKIERLIVVDEEFRCVGLITVKDI 196


>gi|206969695|ref|ZP_03230649.1| thioesterase family protein [Bacillus cereus AH1134]
 gi|228954879|ref|ZP_04116899.1| hypothetical protein bthur0006_42460 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
 gi|229072112|ref|ZP_04205321.1| hypothetical protein bcere0025_42780 [Bacillus cereus F65185]
 gi|229081862|ref|ZP_04214354.1| hypothetical protein bcere0023_44900 [Bacillus cereus Rock4-2]
 gi|206735383|gb|EDZ52551.1| thioesterase family protein [Bacillus cereus AH1134]
 gi|228701450|gb|EEL53944.1| hypothetical protein bcere0023_44900 [Bacillus cereus Rock4-2]
 gi|228711046|gb|EEL63012.1| hypothetical protein bcere0025_42780 [Bacillus cereus F65185]
 gi|228804868|gb|EEM51467.1| hypothetical protein bthur0006_42460 [Bacillus thuringiensis
           serovar kurstaki str. T03a001]
          Length = 437

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDESNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VVD+  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVDEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|40074228|gb|AAR39393.1| 6-phospho-3-hexuloisomerase [Bacillus methanolicus MGA3]
          Length = 184

 Score = 85.7 bits (211), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 11/179 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +  L SS+      +    V  I   K +V + G G+SG +    A  +   G  ++
Sbjct: 8   AEIVKELNSSVNQIADEEAEALVNGILQSK-KVFVAGAGRSGFMAKSFAMRMMHMGIDAY 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V      +       ++D++I+ S SG +  L ++   A+     + A+T   +S +  
Sbjct: 67  VVGETVTPNY-----EKEDILIIGSGSGETKSLVSMAQKAKSIGGTIAAVTINPESTIGQ 121

Query: 155 HADIVLTLPKEPESCP---HGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            ADIV+ +P  P+        + P  S   Q      DA+ +  +E +       Y  H
Sbjct: 122 LADIVIKMPGSPKDKSEARETIQPMGSLFEQTLLLFYDAVILRFMEKKGLDTKTMYGRH 180


>gi|300722901|ref|YP_003712197.1| IMP dehydrogenase [Xenorhabdus nematophila ATCC 19061]
 gi|297629414|emb|CBJ90015.1| IMP dehydrogeanse [Xenorhabdus nematophila ATCC 19061]
          Length = 517

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 79/219 (36%), Gaps = 16/219 (7%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  IL   R   I   A+T ++  +V  H+ +      L  +  S      P  SA M  
Sbjct: 24  LGEILPMLR---IKKEALTFDDVLLVPAHSTVLPNTADLSTQLTSTIRLNVPMLSAAMDT 80

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
               +LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 81  VTESSLAIALAQEGGIGFIHKNMSIERQAEEVSRVKKHESGVV---TDPVTVTPQTTLRE 137

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV    +L GIIT  D+   F  DL+   V  VM        + E 
Sbjct: 138 VQELAVRNGFAGYPVVTGANELVGIITGRDVR--FVTDLDQ-PVTAVMTPKERLVTVKEG 194

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 195 EAREIVLQKMHEQRVEKALVVDDNFHLLGMITVKDFQKA 233


>gi|11498454|ref|NP_069682.1| hypothetical protein AF0848 [Archaeoglobus fulgidus DSM 4304]
 gi|2649753|gb|AAB90389.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 284

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 58/133 (43%), Gaps = 4/133 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            G   G L    ++V+ +     +V       L +A+  + EK  G   +V++   + GI
Sbjct: 66  KGRYGGNLSAAVNEVVETIMEREVVTVNESDSLEEAVETMFEKNVGGCPIVNKDDVVVGI 125

Query: 267 ITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           ITE DI +    + +      D M  +   +     +  AM+ + +  +  + ++DD   
Sbjct: 126 ITERDILKYLGANRSIDGVASDYMTSSVITLRPKDSIERAMRTMIEKKLRRIPIIDD-GI 184

Query: 326 AIGIVHFLDLLRF 338
            +G++   ++LR+
Sbjct: 185 LVGLITVREILRY 197



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 50/122 (40%), Gaps = 17/122 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN----------- 281
                L++A+ ++  + F  + + D G ++L+GII+  D    F                
Sbjct: 13  PPTSTLMNALKMMLRRNFRRIPIADPGTKRLEGIISATDFVNIFGGGPKFGLIKGRYGGN 72

Query: 282 -----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   VE +M +    + E   L  A++ + + N+    +V+     +GI+   D+L
Sbjct: 73  LSAAVNEVVETIMEREVVTVNESDSLEEAVETMFEKNVGGCPIVNKDDVVVGIITERDIL 132

Query: 337 RF 338
           ++
Sbjct: 133 KY 134



 Score = 42.6 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 55/144 (38%), Gaps = 23/144 (15%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 +    +   I L      +  A+  + EK+   + ++D+   L G+IT  +I R
Sbjct: 139 RSIDGVASDYMTSSVITLRPKD-SIERAMRTMIEKKLRRIPIIDD-GILVGLITVREILR 196

Query: 275 NFH-------------KDLNTLSVEDVMIKNPKVILEDTL-------LTVAMQLLRQHNI 314
            F              KD     +  ++  +  ++ +D L       ++  +  + +   
Sbjct: 197 YFGTGEAFRMLTSGNIKDAIDKPISTILANDELLVYKDILTFPRNISISQLVSSMLEKGY 256

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
            V ++V +  K  GI+   DL+RF
Sbjct: 257 GVALIV-ENGKLEGIITERDLIRF 279



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                +   ++ + EK +G   +V E  KL+GIITE D+ R  
Sbjct: 239 PRNISISQLVSSMLEKGYGVALIV-ENGKLEGIITERDLIRFL 280



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 29/63 (46%), Gaps = 8/63 (12%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL-------RF 338
           ++  K+   +   + L  A++++ + N   + + D   ++  GI+   D +       +F
Sbjct: 3   EIATKDVFTLPPTSTLMNALKMMLRRNFRRIPIADPGTKRLEGIISATDFVNIFGGGPKF 62

Query: 339 GII 341
           G+I
Sbjct: 63  GLI 65


>gi|308175155|ref|YP_003921860.1| hypothetical protein BAMF_3264 [Bacillus amyloliquefaciens DSM 7]
 gi|307608019|emb|CBI44390.1| Uncharacterized HTH-type transcriptional regulator RBAM_031420
           [Bacillus amyloliquefaciens DSM 7]
 gi|328555126|gb|AEB25618.1| hypothetical protein BAMTA208_17330 [Bacillus amyloliquefaciens
           TA208]
 gi|328913485|gb|AEB65081.1| Uncharacterized HTH-type transcriptional regulator [Bacillus
           amyloliquefaciens LL3]
          Length = 285

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 71/198 (35%), Gaps = 6/198 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +       +   +  H  M  +  ++  ++ +   +  +S L  +           AVE 
Sbjct: 73  ITLAQEIVQEPVQHIHEEMSPDDDIEVIIQKVF--RANISGLTDTFHLLDPADVEKAVEM 130

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I +   R+   G G SG I +        TG        +       G++     +I +S
Sbjct: 131 IHSAD-RIEFYGNGGSGLIATDAYHKFMRTGINCIAHTDSHFQAMSAGLLGPGSAVIGIS 189

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SGS+ ++   +  A+      I ITS  KS +   +D+VL       +        ++ 
Sbjct: 190 HSGSNKDVLDAVKTAKSLGAGTIGITSYQKSPLTQISDVVLYTSTRETAFRTEA--MSAR 247

Query: 180 IMQLAIGDALAIALLESR 197
           + QL + D L  A    R
Sbjct: 248 LAQLTVIDTLYFATARLR 265


>gi|237755674|ref|ZP_04584284.1| nucleotidyl transferase [Sulfurihydrogenibium yellowstonense SS-5]
 gi|237692156|gb|EEP61154.1| nucleotidyl transferase [Sulfurihydrogenibium yellowstonense SS-5]
          Length = 171

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 1/97 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMI 290
            +     + +A+   +E     + VVD+   L G IT+GDI R   +      ++E++  
Sbjct: 5   FISPNSTIKEALKKFNEIGEKVLIVVDKNNHLLGTITDGDIRRYILNTGTIEGNIENIYN 64

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           KNPK I  D     A Q++ ++ + +L V+D+ ++ +
Sbjct: 65  KNPKFIYSDDSKEKAKQIMLENKVEILPVIDNQKRVV 101



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           I  ++ +  A++   +    VL+VVD     +G +   D+ R+
Sbjct: 6   ISPNSTIKEALKKFNEIGEKVLIVVDKNNHLLGTITDGDIRRY 48


>gi|16765831|ref|NP_461446.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56412607|ref|YP_149682.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|167549471|ref|ZP_02343230.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167991816|ref|ZP_02572915.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168232075|ref|ZP_02657133.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168238181|ref|ZP_02663239.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|168243286|ref|ZP_02668218.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168261452|ref|ZP_02683425.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168466743|ref|ZP_02700597.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168817735|ref|ZP_02829735.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194446475|ref|YP_002041770.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194449572|ref|YP_002046571.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194468798|ref|ZP_03074782.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194735799|ref|YP_002115574.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197250105|ref|YP_002147464.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197262593|ref|ZP_03162667.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197361542|ref|YP_002141178.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|198245073|ref|YP_002216576.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200388839|ref|ZP_03215451.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205353613|ref|YP_002227414.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|207857921|ref|YP_002244572.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|213425339|ref|ZP_03358089.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213586535|ref|ZP_03368361.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213622892|ref|ZP_03375675.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-2068]
 gi|213647446|ref|ZP_03377499.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852550|ref|ZP_03382082.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224582953|ref|YP_002636751.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|238913648|ref|ZP_04657485.1| inositol-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Tennessee str. CDC07-0191]
 gi|289824930|ref|ZP_06544339.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|16421054|gb|AAL21405.1| IMP dehydrogenase [Salmonella enterica subsp. enterica serovar
           Typhimurium str. LT2]
 gi|56126864|gb|AAV76370.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|194405138|gb|ACF65360.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407876|gb|ACF68095.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194455162|gb|EDX44001.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194711301|gb|ACF90522.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195630827|gb|EDX49419.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197093018|emb|CAR58454.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
 gi|197213808|gb|ACH51205.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197240848|gb|EDY23468.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197288944|gb|EDY28317.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. SL480]
 gi|197939589|gb|ACH76922.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199605937|gb|EDZ04482.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205273394|emb|CAR38366.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205325237|gb|EDZ13076.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205329893|gb|EDZ16657.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205333604|gb|EDZ20368.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205337680|gb|EDZ24444.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205345033|gb|EDZ31797.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205349672|gb|EDZ36303.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206709724|emb|CAR34074.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224467480|gb|ACN45310.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|261247708|emb|CBG25535.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|301159061|emb|CBW18574.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312913497|dbj|BAJ37471.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320087004|emb|CBY96773.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222789|gb|EFX47860.1| Inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. TN061786]
 gi|326624331|gb|EGE30676.1| inositol-5-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
 gi|332989439|gb|AEF08422.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 488

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 204


>gi|323484830|ref|ZP_08090186.1| hypothetical protein HMPREF9474_01937 [Clostridium symbiosum
           WAL-14163]
 gi|323693802|ref|ZP_08107996.1| inosine-5'-monophosphate dehydrogenase [Clostridium symbiosum
           WAL-14673]
 gi|323401826|gb|EGA94168.1| hypothetical protein HMPREF9474_01937 [Clostridium symbiosum
           WAL-14163]
 gi|323502149|gb|EGB18017.1| inosine-5'-monophosphate dehydrogenase [Clostridium symbiosum
           WAL-14673]
          Length = 483

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMGKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFSR-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   LT A ++L +  +  L +VDD     G++   D+
Sbjct: 152 MTSRNLVTAKEGITLTEAKKILAKARVEKLPIVDDDFNLKGLITIKDI 199


>gi|259907683|ref|YP_002648039.1| putative DNA-binding transcriptional regulator [Erwinia pyrifoliae
           Ep1/96]
 gi|224963305|emb|CAX54790.1| Putative transcriptional regulator [Erwinia pyrifoliae Ep1/96]
 gi|283477535|emb|CAY73451.1| Bifunctional protein glk [Erwinia pyrifoliae DSM 12163]
          Length = 279

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 77/179 (43%), Gaps = 5/179 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     +  EK   S++ ++L      +    +  +K  + R+V+ G+G SG 
Sbjct: 86  ILSDDALKVVGEKLFTEKT--SAIRATLDINSEERLLETLRLLKQAR-RIVLIGVGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  ++  D+++ +S++G   E+      ARR 
Sbjct: 143 VAKDFSWKLMKIGISAVAEQDMHALLASVQALSVGDVLLAISYTGERREINLAAQEARRI 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              ++A T    + +   A+  L    E ++     A  +S   QLA+ D L +AL++ 
Sbjct: 203 GATVLAFTGFTPNTLQQSANHCLYTVAEEQTTR--SAAISSTTAQLALTDLLFMALIQR 259


>gi|16761428|ref|NP_457045.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. CT18]
 gi|29140875|ref|NP_804217.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|25283996|pir||AE0820 IMP dehydrogenase (EC 1.1.1.205) [similarity] - Salmonella enterica
           subsp. enterica serovar Typhi (strain CT18)
 gi|16503728|emb|CAD02713.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29136500|gb|AAO68066.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
          Length = 490

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 43  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 100 QTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 157 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 206


>gi|284166468|ref|YP_003404747.1| signal transduction protein with CBS domains [Haloterrigena
           turkmenica DSM 5511]
 gi|284016123|gb|ADB62074.1| putative signal transduction protein with CBS domains
           [Haloterrigena turkmenica DSM 5511]
          Length = 136

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
              S+  V     + +   ++ E   G V V D+  +L+GI+T  D  R     K  +  
Sbjct: 12  MSSSLHTVTRDTLVEETAQLMLENEIGSVVVTDDDNRLEGILTTTDFVRIVAERKPKDQT 71

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V   M ++   +     +  A  ++ +H    L VVDD    IG+V   DL 
Sbjct: 72  PVSKYMTEDIVTVSAQDSIRDAADVMVEHGFHHLPVVDDEVGVIGMVTTSDLT 124



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ + V  VM  +   +  DTL+    QL+ ++ I  ++V DD  +  GI+   D +R 
Sbjct: 3   MDDIFVGRVMSSSLHTVTRDTLVEETAQLMLENEIGSVVVTDDDNRLEGILTTTDFVRI 61


>gi|260890247|ref|ZP_05901510.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia hofstadii
           F0254]
 gi|260859867|gb|EEX74367.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia hofstadii
           F0254]
          Length = 494

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 48  NIPILSAAMDTVTESKLAIALAREGGIGFIHKNMTIERQAEEVSKVKRYESGMI---TNP 104

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +K    L DA  ++   +   + VVD    LKGIIT  D+    +++  +L V D+M 
Sbjct: 105 ITLKEDAILKDANDLMKNYKVSGLPVVDAEGNLKGIITNRDLK---YREDLSLKVVDIMT 161

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A  +L ++ I  L +V +  K  G++   D+
Sbjct: 162 KDNLVTAPVGTTLEGAKSILLENRIEKLPIV-EGTKLKGLITIKDI 206


>gi|150399883|ref|YP_001323650.1| inosine-5'-monophosphate dehydrogenase [Methanococcus vannielii SB]
 gi|150012586|gb|ABR55038.1| inosine-5'-monophosphate dehydrogenase [Methanococcus vannielii SB]
          Length = 500

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 71/182 (39%), Gaps = 14/182 (7%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            +  +         P  SA M       +AIAL            V+H    +       
Sbjct: 37  DVSVDISGVKLN-IPIISAAMDTVSEKDMAIALARRGGI-----AVIHRNMTIEEQVKHI 90

Query: 221 SDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             V  + + +      +     +++A  I+ E     + VVDE +KL GI+T  D+    
Sbjct: 91  KAVKMAENLVIRDVVTIGPSKTVLEAERIMYEYNVSGLPVVDENKKLVGILTTRDLKFIP 150

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDL 335
           +K +   +VE VM K      EDT     +  L ++ I    ++D + +  +G+V   D+
Sbjct: 151 NKGV---AVETVMTKEVLHCHEDTPYEEILNRLYENKIERAPILDRESKVLLGMVTLRDI 207

Query: 336 LR 337
           L+
Sbjct: 208 LK 209


>gi|30018995|ref|NP_830626.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 14579]
 gi|229126251|ref|ZP_04255269.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-Cer4]
 gi|29894537|gb|AAP07827.1| Transcriptional regulator, RpiR family [Bacillus cereus ATCC 14579]
 gi|228657243|gb|EEL13063.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-Cer4]
          Length = 287

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADLIVNA-NKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +  DD+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEDDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|115523746|ref|YP_780657.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
 gi|115517693|gb|ABJ05677.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisA53]
          Length = 242

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/142 (16%), Positives = 54/142 (38%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  V     ++DA  I+ ++    + VV++  +L G+I+EGD  R      
Sbjct: 2   RAHQIMTHDVVTVGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIRRTEIGT 61

Query: 281 NTL------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                       V ++M  +P  +  D  ++  ++ + ++++  
Sbjct: 62  ERKRGRWLRLLLGPGQSASDFVHEHGRKVSEIMTSHPHTVQADATVSEIVKTMEKYHVKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V+    + +GIV   +LL+ 
Sbjct: 122 LPVL-QDGRMVGIVTRKNLLKA 142



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M  +   +  +  +  A  ++ + ++S L VV+D  + IG++   D +R
Sbjct: 1   MRAHQIMTHDVVTVGPEASIVDAANIMLKQHVSGLPVVNDAGELIGVISEGDFIR 55



 Score = 36.0 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 8/75 (10%), Positives = 25/75 (33%), Gaps = 4/75 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                            V+    + + +  + +     + V+ +  ++ GI+T  ++ + 
Sbjct: 84  HEHGRKVSEIMTSHPHTVQADATVSEIVKTMEKYHVKRLPVL-QDGRMVGIVTRKNLLKA 142

Query: 276 ---FHKDLNTLSVED 287
                +D+   S  D
Sbjct: 143 VANLARDVPAPSAAD 157


>gi|189500001|ref|YP_001959471.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides
           BS1]
 gi|189495442|gb|ACE03990.1| inosine-5'-monophosphate dehydrogenase [Chlorobium phaeobacteroides
           BS1]
          Length = 496

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 68/178 (38%), Gaps = 16/178 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       L+IA+  S    F   +  +     ++  +    S ++ +  ++
Sbjct: 41  NIPLVSAAMDTVTESELSIAIARSGGIGFIHKNLTISQQAKEVAKVKRYESGIIRNPVTL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHKDLNTL 283
                   +  A+ ++ +     + ++       D   KLKGIIT  D+     K     
Sbjct: 101 Y---ENATVQAALDLMQKHSISGIPIIEEPIGPDDASLKLKGIITNRDLRF---KPSPDQ 154

Query: 284 SVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +M  +N     ED  L  A  +L ++ I  L++ D      G++ F D+ +  +
Sbjct: 155 KISSIMTSRNLITADEDINLEDAAGILLENKIEKLLITDGKGNLKGLITFKDIQKRKL 212


>gi|116249833|ref|YP_765671.1| CBS domain-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254481|emb|CAK05555.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 222

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 51/129 (39%), Gaps = 24/129 (18%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           V     +  A  I+       V V+D+  +L GII+EGD+ R                  
Sbjct: 14  VSPDNSVRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLRRTELGREATAELGTSALT 73

Query: 281 -----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                      N   V DVM  +P V+  DT L     L+++H+I  L V+      +GI
Sbjct: 74  AEEKATAYVRSNAWRVADVMSCDPIVVEGDTSLARVSALMQEHHIKRLPVM-RDGVLVGI 132

Query: 330 VHFLDLLRF 338
           V   DLL+ 
Sbjct: 133 VSRADLLKA 141



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVMI     +  D  +  A +++  +++S + V+DD  + +GI+   DLLR
Sbjct: 3   VKDVMITKVVGVSPDNSVRRAAEIMLANHVSGVPVIDDAGRLVGIISEGDLLR 55


>gi|146279621|ref|YP_001169779.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
           17025]
 gi|145557862|gb|ABP72474.1| hypothetical protein Rsph17025_3605 [Rhodobacter sphaeroides ATCC
           17025]
          Length = 139

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNT 282
                  V+   P+ +    +     G + V  +  +L G+IT+ D+  R     +D  T
Sbjct: 7   MHKPAAWVEADTPVSEVARQMKADDIGALPVGRDD-RLIGMITDRDLVLRVLAEGRDPKT 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               DVM +          ++ A+  + +  I  L V+DD ++ +G++   D+
Sbjct: 66  TKASDVMTEGIVWCRTSQPISDAIHQMEERRIRRLPVIDDNKRLVGMLALGDI 118



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 32/64 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + I   +   P+ DAI  + E+R   + V+D+ ++L G++  GDI  +  +DL    V
Sbjct: 72  MTEGIVWCRTSQPISDAIHQMEERRIRRLPVIDDNKRLVGMLALGDIAHSATRDLTAEVV 131

Query: 286 EDVM 289
             V 
Sbjct: 132 HAVA 135



 Score = 39.1 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M K    +  DT ++   + ++  +I  L V  D  + IG++   DL+
Sbjct: 3   VREAMHKPAAWVEADTPVSEVARQMKADDIGALPVGRDD-RLIGMITDRDLV 53


>gi|310659366|ref|YP_003937087.1| cbs domain-containing protein [Clostridium sticklandii DSM 519]
 gi|308826144|emb|CBH22182.1| CBS domain containing protein [Clostridium sticklandii]
          Length = 150

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V     +  AI +L E     + VVDE   + GIITEGD+             
Sbjct: 7   MTPNVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLMYRGGEIKPPRYL 66

Query: 276 --------------FHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         F K L  ++   VEDVM     VI  +  +  A  L+ +H ++ L 
Sbjct: 67  AIFDSYIFIDNPSKFEKQLKKMTGMFVEDVMTTPVIVIEAEQSVPDAANLMTKHKVNRLP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+++  K +GI+   D+++
Sbjct: 127 VIEE-GKLVGIISRRDIIK 144



 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M  N   + +   +  A++LL +HNI+ L VVD+    IGI+   DL+
Sbjct: 1   MKAKDIMTPNVITVSKSDSVEKAIKLLLEHNITGLPVVDEANHVIGIITEGDLM 54



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               + +++    + DA  ++++ +   + V+ E  KL GII+  DI +++ 
Sbjct: 97  MTTPVIVIEAEQSVPDAANLMTKHKVNRLPVI-EEGKLVGIISRRDIIKSYA 147


>gi|229159897|ref|ZP_04287904.1| Transcriptional regulator, RpiR [Bacillus cereus R309803]
 gi|228623636|gb|EEK80455.1| Transcriptional regulator, RpiR [Bacillus cereus R309803]
          Length = 287

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASITAIDKKELEKAADLIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|182415105|ref|YP_001820171.1| signal transduction protein [Opitutus terrae PB90-1]
 gi|177842319|gb|ACB76571.1| putative signal transduction protein with CBS domains [Opitutus
           terrae PB90-1]
          Length = 142

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   V    P+I+   ++     G V VV E  ++ G++T+ DI      D +   
Sbjct: 6   MMTKETRSVSPDTPVIEVAGLMRLHDIGVVPVV-EDGRIVGMLTDRDIVLQVVADGDDPR 64

Query: 285 ---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              V DVM      + E+  +  A+ L+ ++ +  L V++   K +GIV   D+
Sbjct: 65  STVVRDVMSTGSISVNENQEVDEAVALMEKYQVRRLPVLNADSKLVGIVSLGDI 118



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + ++M K  + +  DT +     L+R H+I V+ VV +  + +G++   D++
Sbjct: 1   MKIREMMTKETRSVSPDTPVIEVAGLMRLHDIGVVPVV-EDGRIVGMLTDRDIV 53



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 30/56 (53%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V     + +A+ ++ + +   + V++   KL GI++ GDI  + H  L+   +++V
Sbjct: 79  VNENQEVDEAVALMEKYQVRRLPVLNADSKLVGIVSLGDIAVDVHAGLSGKVLKEV 134


>gi|328951426|ref|YP_004368761.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
           DSM 14884]
 gi|328451750|gb|AEB12651.1| protein of unknown function DUF1486 [Marinithermus hydrothermalis
           DSM 14884]
          Length = 556

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNT 282
           +   +  V+   P+ +A  ++ E   GCV VV +  K  G++T+ D+  R   +  D   
Sbjct: 7   ARKEVVRVRPEAPIAEACRLMEENNIGCV-VVSDNGKPLGLVTDRDLTLRVLRQGMDPKK 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE VM +    + ED  L  A++ +R   I   +VV+D  +  GI    D++
Sbjct: 66  TKVEQVMTREVLTLNEDMGLLEALEAVRGKPIRRFLVVNDKGELSGIFTLDDVM 119



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 5/56 (8%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL----LRFG 339
           +  K    +  +  +  A +L+ ++NI   +VV D  K +G+V   DL    LR G
Sbjct: 6   IARKEVVRVRPEAPIAEACRLMEENNIGC-VVVSDNGKPLGLVTDRDLTLRVLRQG 60



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                L++A+  +  K      VV++  +L GI T  D+     +++    V  +M
Sbjct: 80  NEDMGLLEALEAVRGKPIRRFLVVNDKGELSGIFTLDDVMYLIGREMAD--VASIM 133


>gi|322514530|ref|ZP_08067564.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus ureae ATCC
           25976]
 gi|322119543|gb|EFX91628.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus ureae ATCC
           25976]
          Length = 488

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F KDL+   V  +M 
Sbjct: 99  VTVSPDLTLAELAELVKKNGFAGYPVVDGEDNLVGIITGRDTR--FVKDLSK-PVSKLMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+      ++L+    +  ++VVDD  K  G++   D  + 
Sbjct: 156 PKERLVTVKENATRDKILELMHDRRVEKVLVVDDNFKLKGMITVKDFQKA 205



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            S +M   + +  VK        + ++ ++R   V VVD+  KLKG+IT  D  +   K
Sbjct: 150 VSKLMTPKERLVTVKENATRDKILELMHDRRVEKVLVVDDNFKLKGMITVKDFQKAEQK 208


>gi|311029881|ref|ZP_07707971.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
           sp. m3-13]
          Length = 137

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              ++        + +  T + +   G + +V E  +L G+IT+ D+       K   + 
Sbjct: 8   MTTNVDFCTPLDNVFEVATKMKDLDVGAIPIV-ENGELLGMITDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  +   I  DT +  A  L+ +H I  L VV +    +GIV   DL
Sbjct: 67  PVTNVMSDHLITIGPDTSIAEASHLMSEHQIRRLPVV-ENGHLVGIVSLGDL 117



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 2/79 (2%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G                D +  +     + +A  ++SE +   + VV E   L GI++ G
Sbjct: 57  GIAEKHPGSNPVTNVMSDHLITIGPDTSIAEASHLMSEHQIRRLPVV-ENGHLVGIVSLG 115

Query: 271 DIF-RNFHKDLNTLSVEDV 288
           D+  R++  D    ++ D+
Sbjct: 116 DLAVRDYSDDQAGDALSDI 134



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V DVM  N         +      ++  ++  + +V +  + +G++   DL+  GI
Sbjct: 2   QTVRDVMTTNVDFCTPLDNVFEVATKMKDLDVGAIPIV-ENGELLGMITDRDLVVRGI 58


>gi|311111916|ref|YP_003983138.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa ATCC
           17931]
 gi|310943410|gb|ADP39704.1| inosine-5'-monophosphate dehydrogenase [Rothia dentocariosa ATCC
           17931]
          Length = 505

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/213 (20%), Positives = 71/213 (33%), Gaps = 23/213 (10%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGL-------------APTTSAIMQLAIGDAL 189
           A+T +         D VL LP   +  P                 P  SA M       +
Sbjct: 6   ALTDDPFGFTGLTYDDVLLLPGNTDVIPSDADTSTRLSKRITLGTPIISAAMDTVTDSQM 65

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITI 245
           AI++            V+H    +         V  S   + +          + +   +
Sbjct: 66  AISMARLGG-----MGVIHRNLSIEDQAAHVDRVKRSESGMIINPVTIGADATIGEYDNL 120

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTV 304
               +   + VV E  KL+GIIT  DI      D  +  V DVM   P      +     
Sbjct: 121 CGYYKVSGLPVVTEDGKLEGIITNRDIRYLSRSDYESTLVRDVMTPMPLITGSPNLTKDE 180

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A  LL ++ I  L ++D+  K  G++   D ++
Sbjct: 181 AFALLSKNKIERLPLIDEAGKLAGLITLKDFVK 213


>gi|237653620|ref|YP_002889934.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237624867|gb|ACR01557.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 217

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 12/117 (10%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKD 279
            V           I+  K+   V V+D+ +K+ GII+  D+ R                 
Sbjct: 13  HVGPEASFSQVSEIMRLKKVRHVPVIDQDRKVLGIISHRDVQRAQPSMITTLDVGEVKYL 72

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+ ++  D+M K+       T +  A +++R   +  L+VVDD  + +GIV  +DLL
Sbjct: 73  LSKITAADIMHKSVVSCSPRTQIEEAARMMRPKKLGCLVVVDDAGRLVGIVTSVDLL 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE++M +    +  +   +   +++R   +  + V+D  +K +GI+   D+ R 
Sbjct: 3   VENIMTREVLHVGPEASFSQVSEIMRLKKVRHVPVIDQDRKVLGIISHRDVQRA 56



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 29/64 (45%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G++  L    +       S+        + +A  ++  K+ GC+ VVD+  +L GI+T 
Sbjct: 66  VGEVKYLLSKITAADIMHKSVVSCSPRTQIEEAARMMRPKKLGCLVVVDDAGRLVGIVTS 125

Query: 270 GDIF 273
            D+ 
Sbjct: 126 VDLL 129


>gi|46143710|ref|ZP_00134555.2| COG0516: IMP dehydrogenase/GMP reductase [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
          Length = 487

 Score = 85.7 bits (211), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 98  VTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E       ++L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 155 PKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 204



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    + VM   + +  VK      + + ++ + R   V +VD+  KLKG+IT  D 
Sbjct: 142 VRDLTKTVAKVMTPKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDF 201

Query: 273 FRNFHK 278
            +   K
Sbjct: 202 QKAEQK 207


>gi|157693330|ref|YP_001487792.1| CBS domain-containing protein [Bacillus pumilus SAFR-032]
 gi|157682088|gb|ABV63232.1| CBS domain transcriptional regulator [Bacillus pumilus SAFR-032]
          Length = 440

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +     L        E   G   V D+  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIERTVYLSPDDKLEKWYEKNYETGHGRFPVADDQMKIHGILTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI         +  +E VM KNP  ++  T +  A Q++    I VL VVDD  K IG++
Sbjct: 242 DI----AGHDRSAPIEKVMTKNPLTVIGKTSVASAAQMMVWEGIEVLPVVDDYAKLIGMI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|153837615|ref|ZP_01990282.1| CBS domain pair protein [Vibrio parahaemolyticus AQ3810]
 gi|149749007|gb|EDM59826.1| CBS domain pair protein [Vibrio parahaemolyticus AQ3810]
          Length = 309

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 60/113 (53%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-L 283
           + ++I +V +   +      +  K+    AVV +  ++ G++T+ D+ ++   +D++T  
Sbjct: 162 ASENIAIVDVNDSIRSVAQTMCGKQRSSCAVVMKEGEIIGLVTDRDMTKSVVAQDMDTNQ 221

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + DVM  NP +I +D  +  A+ L+ Q+NI  L VV   ++  G++    L+
Sbjct: 222 PIADVMTPNPVLIEDDAKVIQAISLMLQYNIRCLPVV-HGKQVKGLLTTTHLV 273


>gi|320333947|ref|YP_004170658.1| CBS domain-containing protein [Deinococcus maricopensis DSM 21211]
 gi|319755236|gb|ADV66993.1| CBS domain containing protein [Deinococcus maricopensis DSM 21211]
          Length = 207

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 56/118 (47%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDL 280
           V    P++DA+ IL E+ F  + V+D G KL GI+T  D+                +  L
Sbjct: 14  VTPETPVLDALRILKERGFRRLPVMD-GSKLAGIVTRKDLKDAMPSKATTLSVWELNYML 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L+V ++M +      E   +  A   +++HN+  L V+D   +  GI+   D+LR 
Sbjct: 73  SKLTVGEMMSRPVVTADEGEYMEDAALRMQEHNVGGLPVLDTTGRMTGIITITDVLRA 130



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M   P  +  +T +  A+++L++     L V+D   K  GIV   DL
Sbjct: 3   VRDWMTTRPMTVTPETPVLDALRILKERGFRRLPVMDGS-KLAGIVTRKDL 52



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
               ++ +   +    S P+V       + DA   + E   G + V+D   ++ GIIT  
Sbjct: 66  WELNYMLSKLTVGEMMSRPVVTADEGEYMEDAALRMQEHNVGGLPVLDTTGRMTGIITIT 125

Query: 271 DIFRNF 276
           D+ R F
Sbjct: 126 DVLRAF 131


>gi|258652653|ref|YP_003201809.1| CBS domain containing membrane protein [Nakamurella multipartita
           DSM 44233]
 gi|258555878|gb|ACV78820.1| CBS domain containing membrane protein [Nakamurella multipartita
           DSM 44233]
          Length = 141

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 49/126 (38%), Gaps = 12/126 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  V        A  +L    F  + VVD+  +L GI+TE D+     +D      
Sbjct: 7   MSHPVITVAPTTEAAIAARVLYSHGFTALPVVDD-GRLVGIVTEADLITAPPEDGAHRWR 65

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  L V +VM    + +        A +++    I  L +VD  +  +GI+   DL
Sbjct: 66  RGSATGPLRVGEVMTSPVESLTPGAEAVDAARIMVDERIRCLPIVD-GRHVVGILTRRDL 124

Query: 336 LRFGII 341
           L  G++
Sbjct: 125 LEAGVV 130



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V DVM      +   T   +A ++L  H  + L VVDD  + +GIV   DL+  
Sbjct: 1   MRVRDVMSHPVITVAPTTEAAIAARVLYSHGFTALPVVDD-GRLVGIVTEADLITA 55


>gi|254784369|ref|YP_003071797.1| CBS domain-containing protein [Teredinibacter turnerae T7901]
 gi|237683605|gb|ACR10869.1| CBS domain protein [Teredinibacter turnerae T7901]
          Length = 628

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMIK 291
                +  A  I++  +   + +  E ++L GI+T+ D+  R   K +     V  VM  
Sbjct: 176 SPNITIRRAAQIMTNNKISSLLIT-EDERLVGIMTDRDLRTRVVAKGVADTEPVSGVMTP 234

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P  I     L  A  ++    I  L VVD     +G++   D++R 
Sbjct: 235 KPHCIDMRGRLHQAQLVMMSSGIHHLPVVDRD-VPVGMLGMSDIMRA 280


>gi|193212396|ref|YP_001998349.1| inosine-5'-monophosphate dehydrogenase [Chlorobaculum parvum NCIB
           8327]
 gi|209572741|sp|O50316|IMDH_CHLP8 RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|193085873|gb|ACF11149.1| inosine-5'-monophosphate dehydrogenase [Chlorobaculum parvum NCIB
           8327]
          Length = 494

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 63/174 (36%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL  +         ++H    +       + V      I  
Sbjct: 41  NLPLVSAAMDTVTEAELAIALARAGGIG-----IIHKNLSIDVQARHVAKVKRFESGIIR 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTL 283
                     + +AI ++       + VV+         LKGI+T  D+        +  
Sbjct: 96  NPITLFEDATIQEAIDLMLRHSISGIPVVERPTPEGCLLLKGIVTNRDLR---MTTSSNE 152

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +M  +     ED  L  A ++L Q+ I  L+V+D+     G++ F D+ +
Sbjct: 153 KITTIMTTDLITAQEDIDLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDIQK 206


>gi|197119665|ref|YP_002140092.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
 gi|197089025|gb|ACH40296.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
          Length = 216

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +     + +A+ ++ +K+   + VV+   KL GI+++ D+F+          
Sbjct: 6   RMTPNPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQASPSPATSLA 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               H  L  L+V+  M  +   + EDT L  A +++    I  L V+      +GI+  
Sbjct: 66  IWEIHDLLAKLTVDKTMATDVITVTEDTPLEEAARVMVDRRIGGLPVM-KGDALVGIITE 124

Query: 333 LDLLRF 338
            DL + 
Sbjct: 125 SDLFQA 130



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M  NP  I  D  +T A++L+    I  L VV+   K +GIV   DL + 
Sbjct: 3   VRDRMTPNPITITPDISVTEALRLMGDKKIRRLPVVERTGKLVGIVSDRDLFQA 56



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    PL +A  ++ ++R G + V+ +G  L GIITE D+F+  
Sbjct: 82  MATDVITVTEDTPLEEAARVMVDRRIGGLPVM-KGDALVGIITESDLFQAL 131


>gi|125545649|gb|EAY91788.1| hypothetical protein OsI_13431 [Oryza sativa Indica Group]
          Length = 233

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 101 WCTTDDSVYDAVKSMTQHNVGALVVVKPGQDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 160

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ +  I  + V+D     +G+V   D++R 
Sbjct: 161 DIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDGTGM-VGMVSIGDIVRA 213



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  VK    ++ A+ +++EKR   + V+D 
Sbjct: 139 TERDYLRKIIVQGRSSKSTKVGDIMTEENQLITVKPDTRVLQAMQLMTEKRIRHIPVIDG 198

Query: 260 GQKLKGIITEGDIFRNF 276
              + G+++ GDI R  
Sbjct: 199 TG-MVGMVSIGDIVRAV 214


>gi|332702752|ref|ZP_08422840.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332552901|gb|EGJ49945.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 223

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  +     ++ A  +L +K    + VVD+  KL GI+++ DI             
Sbjct: 7   MNTPVITIGPDESMMKASKLLKDKNIRRLPVVDDTGKLIGILSDRDIKEASPSKATTLDV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  L+ + V+D+M KNP  +  +  +  A  LL + ++  L +VDD    +GI+   
Sbjct: 67  HELYYLLSEIKVKDIMTKNPVRLKAEDSVEKAAVLLSEKSLGGLPIVDDNDSVVGIITEK 126

Query: 334 DL 335
           D+
Sbjct: 127 DM 128



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M      I  D  +  A +LL+  NI  L VVDD  K IGI+   D+   
Sbjct: 3   IKDWMNTPVITIGPDESMMKASKLLKDKNIRRLPVVDDTGKLIGILSDRDIKEA 56


>gi|311067406|ref|YP_003972329.1| putative oxidoreductase [Bacillus atrophaeus 1942]
 gi|310867923|gb|ADP31398.1| putative oxidoreductase [Bacillus atrophaeus 1942]
          Length = 140

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +  V     + +A  ++ +   G + VVD    L+G++T+ DI             
Sbjct: 8   MTKQVATVSSNQTIQEAAALMHQHNVGAIPVVD-QGVLQGMLTDRDIALRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  N      +  L  A +L+ QH I  L +VD+    +GIV   DL
Sbjct: 67  PVSEVMSSNVISGNPNMSLEEASELMAQHQIRRLPIVDNNN-LVGIVALGDL 117



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S+ + M K    +  +  +  A  L+ QHN+  + VVD      G++   D+
Sbjct: 3   SISNSMTKQVATVSSNQTIQEAAALMHQHNVGAIPVVD-QGVLQGMLTDRDI 53


>gi|18313985|ref|NP_560652.1| hypothetical protein PAE3319 [Pyrobaculum aerophilum str. IM2]
 gi|18161560|gb|AAL64834.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 286

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 53/111 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +  + +   PL   I    EKRF  + V+D+ ++  G++    +            V
Sbjct: 166 MTPNPIVARTDDPLEAYIKYFVEKRFRGIPVIDDDKRPIGLLMASRVMDALANCNLKTKV 225

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++M++NP VI ED  +  A++L+    I  L+VV+   K +GI+   D+L
Sbjct: 226 SNLMLRNPPVINEDEDIHEAIRLMVSSGIGRLLVVNSEDKLVGIITRTDIL 276



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +   S++++M  NP V   D  L   ++   +     + V+DD ++ IG++
Sbjct: 157 IPRTSIKNIMTPNPIVARTDDPLEAYIKYFVEKRFRGIPVIDDDKRPIGLL 207



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L    +          + P++     + +AI ++     G + VV+   KL GIIT  D
Sbjct: 215 ALANCNLKTKVSNLMLRNPPVINEDEDIHEAIRLMVSSGIGRLLVVNSEDKLVGIITRTD 274

Query: 272 IFRNFH 277
           I     
Sbjct: 275 ILTRIA 280


>gi|303228364|ref|ZP_07315198.1| inosine-5'-monophosphate dehydrogenase [Veillonella atypica
           ACS-134-V-Col7a]
 gi|302516977|gb|EFL58885.1| inosine-5'-monophosphate dehydrogenase [Veillonella atypica
           ACS-134-V-Col7a]
          Length = 485

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 63/171 (36%), Gaps = 14/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+            V+H    +         V  S   + +
Sbjct: 43  NIPMISSGMDTVTESRMAIAMAREGG-----MGVIHKNMSIEEQAHEVDTVKRSEHGVIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + +   V +  E  KL GIIT  D+   F  DL+   + + 
Sbjct: 98  DPIFLSPQNLLSDAEELMRKYKISGVPIT-EHGKLVGIITNRDMR--FETDLSR-QIGEC 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +      E T L +A  +L +H I  L +VD      G++   D+ + 
Sbjct: 154 MTSEGLVTAPEGTSLEMAKSILSKHRIEKLPLVDKDSNLKGLITIKDIEKA 204


>gi|323529966|ref|YP_004232118.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1001]
 gi|323386968|gb|ADX59058.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1001]
          Length = 147

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               + ++ +  +   V        + +AI ++++K  G + V D G  + GI+TE D  
Sbjct: 1   MTTVAQLLKTKPNHTTVFTIGADDSVYEAIKLMADKGIGALVVTD-GDTIAGIVTERDYA 59

Query: 274 RN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M K  + +  D      M L+ +  +  L V+++  + +G+V
Sbjct: 60  RKVVLMDRSSKATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND-RLVGMV 118

Query: 331 HFLDLLR 337
              DL++
Sbjct: 119 SIGDLVK 125



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        +               ++  V+      D + +++E+R   + V+ E
Sbjct: 54  TERDYA--RKVVLMDRSSKATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVI-E 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ +N 
Sbjct: 111 NDRLVGMVSIGDLVKNI 127


>gi|228932239|ref|ZP_04095124.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228827433|gb|EEM73182.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 287

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R  + +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGVTVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|311696842|gb|ADP99715.1| signal-transduction protein [marine bacterium HP15]
          Length = 624

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 59/139 (42%), Gaps = 8/139 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-- 262
            V         +    + ++              L +A  I++E     + ++DE  +  
Sbjct: 137 AVSRREKSNQLMTSKVTRLIAREPVSA--PHTVRLQEAARIMTENGVSALLLMDEEGEKP 194

Query: 263 -LKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            LKGIIT+ D+  R   + L +   + ++M ++   I  +  +  AM  +  +N+  L V
Sbjct: 195 LLKGIITDRDLRTRALSEALASETPISEIMSEDLITIRSNMFIFEAMLTMLHNNVHHLPV 254

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +D  +   G++   D++++
Sbjct: 255 MDRDE-VRGVIALSDIVKY 272


>gi|222055274|ref|YP_002537636.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. FRC-32]
 gi|221564563|gb|ACM20535.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. FRC-32]
          Length = 489

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 82/199 (41%), Gaps = 12/199 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
            +T ++  ++  H+ I+   + L  +         P  SA M        AI++      
Sbjct: 9   GLTFDDVLLLPAHSQILPRDVDLSTQLSRNIQLNIPLVSAAMDTVTESRAAISMAREGGI 68

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F +     ++  +    S ++    ++   +    + +A+ I+++ R   V + 
Sbjct: 69  GFIHKNFSIADQAMEVDKVKKSESGMIVDPITM---RPNQKIREALEIMAKYRISGVPIT 125

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISV 316
               KL GI+T  D+   F  +L+ L + + M K N   +   T L  A + L+   +  
Sbjct: 126 KSNGKLVGILTNRDLR--FETNLDLL-ISERMTKRNLVTVSVGTTLEQAKEHLKHTRVEK 182

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L+VVD  +   G++   D+
Sbjct: 183 LLVVDSDKNLKGLITIKDI 201


>gi|302543446|ref|ZP_07295788.1| CBS domains protein [Streptomyces hygroscopicus ATCC 53653]
 gi|302461064|gb|EFL24157.1| CBS domains protein [Streptomyces himastatinicus ATCC 53653]
          Length = 139

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     L  A  ++ +   G + + D  ++L GI+T+ DI        +D + 
Sbjct: 8   MHPGAQWIPATENLERAAQLMRDLDVGALPISDSQERLCGILTDRDIVVGCVAQGRDPSR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  D+    P+ I  D  ++  ++ +  H I  L V+D  ++ +G++   DL R
Sbjct: 68  MTAGDLAKGTPRWISSDADVSEVLREMEDHRIRRLPVIDKNKRLVGMISEADLAR 122



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 29/60 (48%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     + + +  + + R   + V+D+ ++L G+I+E D+ R+  +      VE V
Sbjct: 77  TPRWISSDADVSEVLREMEDHRIRRLPVIDKNKRLVGMISEADLARHLSEQQIGEFVEKV 136



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               D+M    + I     L  A QL+R  ++  L + D  ++  GI+   D++
Sbjct: 2   TKAADIMHPGAQWIPATENLERAAQLMRDLDVGALPISDSQERLCGILTDRDIV 55


>gi|149908786|ref|ZP_01897446.1| inositol-5-monophosphate dehydrogenase [Moritella sp. PE36]
 gi|149808060|gb|EDM68001.1| inositol-5-monophosphate dehydrogenase [Moritella sp. PE36]
          Length = 487

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  +A M       LAIAL E     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLAAAMDTVTEGRLAIALAEEGGIGFVHKNMSIERQAAEVRLVKKYVSGIV---AEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    +     +  +  F    VV E   L GIIT  D+      D +T  VE VM 
Sbjct: 98  VTVKPDMTIAAVAELAKQYGFAGFPVVTEANDLVGIITGRDVRFV---DDSTALVESVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +  D      + L+ +H I  ++ V++  K  G++   D  + 
Sbjct: 155 PKDRLVTVGRDAPREEVLGLMHKHRIEKVLAVNEDFKLTGMITVKDFKQA 204


>gi|118580427|ref|YP_901677.1| inosine-5'-monophosphate dehydrogenase [Pelobacter propionicus DSM
           2379]
 gi|118503137|gb|ABK99619.1| inosine-5'-monophosphate dehydrogenase [Pelobacter propionicus DSM
           2379]
          Length = 489

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +         V  S   + +
Sbjct: 42  NIPLVSAAMDTVTESRTAICMAREGGLG-----IIHKNSTIAQQAFEVDKVKKSESGMIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ I+S  R   V +     KL GI+T  D+   F  D   L +   
Sbjct: 97  DPITMRPNQKISEALEIMSRYRISGVPITKPNGKLVGILTNRDLR--FETD-YDLPISAR 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K N   +   T L  A + L+   +  L+VVD+ +   G++   D+ +  
Sbjct: 154 MTKRNLVTVAVGTTLEQAKEHLKHTRVEKLLVVDNDRFLKGLITIKDIEKVK 205


>gi|170700325|ref|ZP_02891337.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria IOP40-10]
 gi|170134759|gb|EDT03075.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria IOP40-10]
          Length = 153

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VV EG  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKNDFVYDAIKLMAEKGIGALLVV-EGDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVK 127



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLIGLISIGDLVKSVIAD 132


>gi|37521022|ref|NP_924399.1| poly A polymerase [Gloeobacter violaceus PCC 7421]
 gi|35212018|dbj|BAC89394.1| gll1453 [Gloeobacter violaceus PCC 7421]
          Length = 582

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 43/104 (41%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    L+ A   L+    G + VV+    L GII+  D+    +       VE  M    
Sbjct: 40  RPEIALMAARQRLTRYGHGAMPVVNAQGGLMGIISRRDLDIALYHGFAEDPVERFMTATV 99

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D  L     L+  ++I  + V+ +  + +GI+   DLLR
Sbjct: 100 LTVPSDAPLDEIEALMVTYDIGRVPVL-EAGQLVGIITRTDLLR 142



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             DVM    + +  +  L  A Q L ++    + VV+     +GI+   DL
Sbjct: 28  ARDVMSAPVRTLRPEIALMAARQRLTRYGHGAMPVVNAQGGLMGIISRRDL 78



 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V    PL +   ++     G V V+ E  +L GIIT  D+ R  H+
Sbjct: 102 VPSDAPLDEIEALMVTYDIGRVPVL-EAGQLVGIITRTDLLRQHHQ 146


>gi|163847531|ref|YP_001635575.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525381|ref|YP_002569852.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
 gi|163668820|gb|ABY35186.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449260|gb|ACM53526.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
          Length = 155

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V     + DA  +++  R   + VV+    L G++TE D+     +     +V
Sbjct: 7   MTKNVVCVTDDAAVEDAARLMTRNRISGLPVVNPQGMLVGLVTEHDLIAKEGR-----TV 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++M ++   +  DT +     LL    I  + VV +  K +GIV   DL+R
Sbjct: 62  KEIMTRSVISVSPDTEVEQIQHLLTNQRIRRVPVV-ENGKVVGIVSRSDLVR 112



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++M KN   + +D  +  A +L+ ++ IS L VV+     +G+V   DL+
Sbjct: 1   MKAREIMTKNVVCVTDDAAVEDAARLMTRNRISGLPVVNPQGMLVGLVTEHDLI 54


>gi|292489036|ref|YP_003531923.1| inosine-5'-monophosphate dehydrogenase [Erwinia amylovora CFBP1430]
 gi|292900166|ref|YP_003539535.1| inosine-5'-monophosphate dehydrogenase [Erwinia amylovora ATCC
           49946]
 gi|291200014|emb|CBJ47139.1| inosine-5'-monophosphate dehydrogenase [Erwinia amylovora ATCC
           49946]
 gi|291554470|emb|CBA21987.1| inosine-5'-monophosphate dehydrogenase [Erwinia amylovora CFBP1430]
          Length = 488

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL +L V  VM 
Sbjct: 98  QTVLPTTALSEVKALTERNGFAGYPVVNGENELVGIITGRDVR--FVTDL-SLPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLHKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|315499646|ref|YP_004088449.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis excentricus
           CB 48]
 gi|315417658|gb|ADU14298.1| inosine-5'-monophosphate dehydrogenase [Asticcacaulis excentricus
           CB 48]
          Length = 485

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 68/172 (39%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       LA+A+ ++         ++H             +V         
Sbjct: 39  NIPLVSSAMDTVTEARLAVAMAQAGGLG-----IIHRNLSNERQAEEIREVKRYESGMVI 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +   +     L +   I++ +      VV+ +  KL GI+T  DI   F  D  + +  D
Sbjct: 94  NPVTIHPETTLSEVRDIIARRHISGFPVVERDTNKLVGILTNRDIR--FETD-GSKTAAD 150

Query: 288 VMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M ++    + E      A +L+  H I  ++VVDD  +A+G++   D+ + 
Sbjct: 151 LMTRDALITVTEGVNQNKARELMALHRIERIIVVDDAYRAVGLITVKDMEKA 202


>gi|254381615|ref|ZP_04996979.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340524|gb|EDX21490.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 218

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 17/139 (12%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
                        +  V    P  +    L+E +   V V+D   +  G+I+E D+    
Sbjct: 1   MKHREVRELMTREVVTVLGNAPFKEIARTLTEHKVSAVPVIDSAGRPLGVISERDLLPKS 60

Query: 274 -------RNF-------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                  R+                 E++M   P     D  +  A +L+    +  L+V
Sbjct: 61  AGQSDYYRSLPEREAWQEAKAAGTRAEELMSSPPVCARPDWTVAEAARLMEAQGVKRLLV 120

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VDD     GIV   DLLR 
Sbjct: 121 VDDADVLTGIVSRRDLLRI 139



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEG 260
           D+Y   P  +       A        S P V  +    + +A  ++  +    + VVD+ 
Sbjct: 65  DYYRSLPEREAWQEAKAAGTRAEELMSSPPVCARPDWTVAEAARLMEAQGVKRLLVVDDA 124

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             L GI++  D+ R F +D   +   ++M
Sbjct: 125 DVLTGIVSRRDLLRIFLRDDEDIR-HEIM 152


>gi|15242788|ref|NP_201154.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|9758290|dbj|BAB08814.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737583|dbj|BAF00733.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010375|gb|AED97758.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 543

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     + +A   ++ +R   + + D  + L GI+T+ DI  R   ++LN     V  VM
Sbjct: 66  VPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQELNVEETPVSKVM 125

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  +L +TL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 126 TKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 169



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 43/95 (45%), Gaps = 4/95 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVM 289
           V     ++     + E +  C  V+ E  KL+GI T  D + R   ++L  +   VE VM
Sbjct: 235 VSPTDTVLTVAKKMVEFQSSCAVVIIED-KLRGIFTSKDILMRVVAENLPPSETLVETVM 293

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            +NP+  + DT +  A+ ++ +     L V D   
Sbjct: 294 TQNPESTIVDTPIVEALHIMHEGKFLHLPVTDKEG 328


>gi|293394835|ref|ZP_06639125.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291422586|gb|EFE95825.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 282

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 79/181 (43%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++ +  ++     ++ EK    +L ++L      + H A+  ++A + RV++ GIG S
Sbjct: 87  NRILSSDALKTVGEKLLVEKHA--ALRATLDINSEERLHQALSMLRAAR-RVILMGIGAS 143

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +    +  L   G  +            +  + + DL++ +S+SG   E+      AR
Sbjct: 144 GLVAKDFSFKLLKLGVMAVAESDMHVQLAAVQALDKQDLLVAISFSGERREINLAAEEAR 203

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++A+T  + + +   AD  L      E      A  +S+  Q A+ D L +AL++
Sbjct: 204 IAGAQVLALTCFSPNGLQQRADHCLYT--IAEEPNTRSAAISSSTAQYALTDLLFMALIQ 261

Query: 196 S 196
            
Sbjct: 262 H 262


>gi|259907728|ref|YP_002648084.1| inosine 5'-monophosphate dehydrogenase [Erwinia pyrifoliae Ep1/96]
 gi|224963350|emb|CAX54835.1| Inosine-5\'-monophosphate dehydrogenase [Erwinia pyrifoliae Ep1/96]
 gi|283477582|emb|CAY73498.1| inosine-5'-monophosphate dehydrogenase [Erwinia pyrifoliae DSM
           12163]
          Length = 488

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 44/210 (20%), Positives = 74/210 (35%), Gaps = 13/210 (6%)

Query: 136 RFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              I   A+T ++  +V  H+ +      L  +         P  SA M       LAIA
Sbjct: 1   MLRITKKALTFDDVLLVPAHSTVLPNTADLSTQLTKNIRLNIPMLSAAMDTVTEAGLAIA 60

Query: 193 LLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           L +     F   +  +     ++  +    S V+        V     L +   +     
Sbjct: 61  LAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTALSEVKALTERNG 117

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQL 308
           F    VV+   +L GIIT  D+   F  DL +L V  VM        + E     V +  
Sbjct: 118 FAGYPVVNGENELVGIITGRDVR--FVTDL-SLPVSAVMTPKERLVTVKEGEAREVVLHK 174

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +   +VVDD    +G++   D  + 
Sbjct: 175 MHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|114770297|ref|ZP_01447835.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
           proteobacterium HTCC2255]
 gi|114549134|gb|EAU52017.1| inosine-5'-monophosphate dehydrogenase (guaB) [alpha
           proteobacterium HTCC2255]
          Length = 180

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN- 281
             S            + DA+  +S+K +G V VVD  +K+ G++TE DI  +   K+LN 
Sbjct: 18  YRSKQMPLTKSPDTNVFDAVNAMSKKNYGSVVVVDTEKKVIGVVTERDIMNKVVGKELNP 77

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  +M +NPK+  E   +   ++++       L VVDD  K   +    D +
Sbjct: 78  KETLLSSIMTENPKLARETDDMLEWLRIMSNERFRRLPVVDDQGKIKAVFTQGDFV 133


>gi|312173192|emb|CBX81447.1| inosine-5'-monophosphate dehydrogenase [Erwinia amylovora ATCC
           BAA-2158]
          Length = 488

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL +L V  VM 
Sbjct: 98  QTVLPTTALSEVKALTERNGFAGYPVVNGENELVGIITGRDVR--FVTDL-SLPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLHKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|311068012|ref|YP_003972935.1| putative oxidoreductase [Bacillus atrophaeus 1942]
 gi|310868529|gb|ADP32004.1| putative oxidoreductase [Bacillus atrophaeus 1942]
          Length = 149

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G V VVDE  + L GI+T+ D+       K  N+  + D M K P  
Sbjct: 21  VYEAAVKMKDADVGAVPVVDEDGETLVGIVTDRDLVLRGIASKRPNSQKITDAMTKEPVS 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + EDT +   + L+    +  + V    +K +GIV   DL
Sbjct: 81  VEEDTSVDEVLHLMAARQLRRIPVT-KNKKLVGIVTLGDL 119



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
             ++++M  + +       +  A   ++  ++  + VVD+  +  +GIV   DL+  GI
Sbjct: 2   TKIKELMTADLQYCTVLDNVYEAAVKMKDADVGAVPVVDEDGETLVGIVTDRDLVLRGI 60



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           V+    + + + +++ ++   + V  + +KL GI+T GD+
Sbjct: 81  VEEDTSVDEVLHLMAARQLRRIPVT-KNKKLVGIVTLGDL 119


>gi|229087169|ref|ZP_04219318.1| hypothetical protein bcere0022_37410 [Bacillus cereus Rock3-44]
 gi|228696141|gb|EEL48977.1| hypothetical protein bcere0022_37410 [Bacillus cereus Rock3-44]
          Length = 437

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D+     KD     +E VM K P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKDMI-GIAKD---TPIEKVMTKQPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VVD+  +  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVDENNRLQGIISRQDVLQA 305



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 13/74 (17%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
                  V     +  A  ++  +    + VVDE  +L+GII+  D+ +           
Sbjct: 256 MTKQPITVNGKMSVAAAARMMVWEGIELLPVVDENNRLQGIISRQDVLQAMQMIQRQPQV 315

Query: 284 --SVEDVMIKNPKV 295
             ++ED++      
Sbjct: 316 GETIEDIVTNQFVT 329


>gi|239816604|ref|YP_002945514.1| signal transduction protein with CBS domains [Variovorax paradoxus
           S110]
 gi|239803181|gb|ACS20248.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus S110]
          Length = 142

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 48/117 (41%), Gaps = 5/117 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KD 279
           +     +         + DA+  L+    G + V+D G +L G ++E D  R      K+
Sbjct: 8   LKRHDSAAWRTSPDTSVFDALATLARFEVGALMVMD-GDRLVGFLSERDYTRKVALQGKN 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + V ++M  +   +   T     M L+ Q     L VVD   K +G++   DL+
Sbjct: 67  SKEMKVSEIMTPDVMTVTPQTRTRACMALMSQRKFRHLPVVDGA-KVVGMISIQDLM 122


>gi|114046626|ref|YP_737176.1| CBS domain-containing protein [Shewanella sp. MR-7]
 gi|113888068|gb|ABI42119.1| CBS domain containing protein [Shewanella sp. MR-7]
          Length = 143

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/125 (32%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V++   L  A  I  +  F  + VVDE  KL+G+++E D+ R           
Sbjct: 9   MRTRVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRAISPNLGSSAE 67

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             KDL TL   V  VM +NP  +     L  A + L +HNI  L V+D+    +GIV + 
Sbjct: 68  TAKDLETLQKRVHQVMTRNPVTVAPHVTLDCATRTLLEHNIGCLPVLDNGD-LVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA  +  Q N   L+VVD+  K  G++   DLLR 
Sbjct: 5   IADIMRTRVVTVEMDDRLTVAKDIFDQANFHHLLVVDE-YKLEGVLSERDLLRA 57



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                L TL      VM    +   V     L  A   L E   GC+ V+D    L GI+
Sbjct: 67  ETAKDLETLQKRVHQVM--TRNPVTVAPHVTLDCATRTLLEHNIGCLPVLD-NGDLVGIV 123

Query: 268 TEGDIFRNF 276
           T  D+ R +
Sbjct: 124 TWKDLLRAY 132


>gi|307726495|ref|YP_003909708.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1003]
 gi|307587020|gb|ADN60417.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1003]
          Length = 229

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   +  EKR     V+D    + G+I+EGD+ R      +           
Sbjct: 14  VTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLRRSEIGTDERRRVSWLDFW 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                           V DVM  +   +  DTLL     +L    I  + V  +  + +G
Sbjct: 74  SASHEARDYVKTHGTKVSDVMTTDVITVEPDTLLGEVAAILETRGIKRVPVT-EAGRLVG 132

Query: 329 IVHFLDLLRF 338
           IV   +L++ 
Sbjct: 133 IVSRANLVQA 142



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM  N   +  D  +    +L  +  IS   V+D     +G++   DLLR
Sbjct: 1   MRASDVMTGNVISVTPDMTIREVARLFVEKRISGAPVLDPDGSVVGMISEGDLLR 55


>gi|15669617|ref|NP_248430.1| inosine-5'-monophosphate dehydrogenase GuaB [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2496178|sp|Q58821|Y1426_METJA RecName: Full=Uncharacterized protein MJ1426
 gi|1592076|gb|AAB99437.1| inosine-5'-monophosphate dehydrogenase, (guaB) [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 168

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 36/150 (24%), Positives = 54/150 (36%), Gaps = 34/150 (22%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------ 276
           +        +V     LID I +  + +     V+++  KL GII+E DI +        
Sbjct: 17  IKDIMKKPIVVYEDNDLIDVIRLFRKNKISGAPVLNKDGKLVGIISESDIVKTIVTHNED 76

Query: 277 ----------------------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                        K+     V DVM +   V   D  +  A +L
Sbjct: 77  LNLILPSPLDLIELPLKTALKIEEFMEDLKNALKTKVRDVMTRKVIVAKPDMTINDAAKL 136

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++NI  L VVDD    IGIV   DL+  
Sbjct: 137 MVKNNIKRLPVVDDEGNLIGIVTRGDLIEA 166



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + + K    + DA  ++ +     + VVD+   L GI+T GD+    
Sbjct: 117 MTRKVIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEAL 167


>gi|238021587|ref|ZP_04602013.1| hypothetical protein GCWU000324_01487 [Kingella oralis ATCC 51147]
 gi|237866201|gb|EEP67243.1| hypothetical protein GCWU000324_01487 [Kingella oralis ATCC 51147]
          Length = 283

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 8/173 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      L     SL      +   A+  +   + R+   G+G SG +          
Sbjct: 101 KVLGNTAAALLGARRSLDEN---ELENAIAMLSHAR-RIEFYGVGNSGIVAQDAQHKFFR 156

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              ++T  D+++V+S SGSS EL   +  A+     +I IT   
Sbjct: 157 FGVSTVAYSDTHIQLM-AAVLTAQDVLVVISNSGSSIELLDAVSIAKENGAKVIVIT-RA 214

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            S +A  AD  L L  + ++  H  +P  S  +QLA+ D LAI L      + 
Sbjct: 215 GSPLAQFADCELALAAQEDA--HRYSPMVSRSLQLAVIDILAIGLALRLGETA 265


>gi|14590055|ref|NP_142119.1| hypothetical protein PH0107 [Pyrococcus horikoshii OT3]
 gi|3256493|dbj|BAA29176.1| 139aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 139

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL-NTLSVEDVMI 290
           VK    + +A  ++ E   G + V+++   + G  T+ D I R     L   + VE +M 
Sbjct: 21  VKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIMT 80

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +N      +T L   ++ + +H I  +++ ++  K +GI    DLL  
Sbjct: 81  RNLITANVNTPLGEVLRKMAEHRIKHILI-EEEGKIVGIFTLSDLLEA 127



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 28/60 (46%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++  M K    +   T +  A +L+ + ++  L+V++D    +G     D++R  I+
Sbjct: 7   KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV 66



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +  PL + +  ++E R   + + +E  K+ GI T  D+     + L T 
Sbjct: 87  NVNTPLGEVLRKMAEHRIKHILI-EEEGKIVGIFTLSDLLEASRRRLETA 135


>gi|15615168|ref|NP_243471.1| hypothetical protein BH2605 [Bacillus halodurans C-125]
 gi|10175226|dbj|BAB06324.1| BH2605 [Bacillus halodurans C-125]
          Length = 142

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 11/124 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +        + +    +     G V +  E ++L G++T+ DI       K  N+ 
Sbjct: 8   MTTDVDYCSPDDNIFEVAVKMERDNVGAVPIC-EEEQLLGMVTDRDIVIRSVAKKKPNST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-------L 336
            V++VM ++      D  +  A +L+    I  L VV +  + +GI    DL        
Sbjct: 67  PVKEVMSEHLVTATPDMTVQEAAKLMATKQIRRLPVV-ENNRLVGICSLGDLAVRDSSDH 125

Query: 337 RFGI 340
           + GI
Sbjct: 126 QAGI 129



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + DVM  +      D  +      + + N+  + + ++ Q  +G+V   D++
Sbjct: 4   IRDVMTTDVDYCSPDDNIFEVAVKMERDNVGAVPICEEEQ-LLGMVTDRDIV 54


>gi|310764764|gb|ADP09714.1| inosine 5'-monophosphate dehydrogenase [Erwinia sp. Ejp617]
          Length = 488

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL +L V  VM 
Sbjct: 98  QTVLPTTALSEVKALTERNGFAGYPVVNGENELVGIITGRDVR--FVTDL-SLPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLHKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|330508675|ref|YP_004385103.1| chloride transporter, chloride channel (ClC) family protein
           [Methanosaeta concilii GP-6]
 gi|328929483|gb|AEB69285.1| chloride transporter, chloride channel (ClC) family protein
           [Methanosaeta concilii GP-6]
          Length = 577

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V   C + +    +    +    VVDE  +L G+IT  DI R    +   ++V
Sbjct: 450 MHKEVITVSPLCRISEVRDGIYRCNYTGFPVVDE-GRLVGMITFDDIRRIPPHEQEKMTV 508

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
           ++V ++ P  I       +AM ++ ++++  L VV  DD QK IGI+   D++R 
Sbjct: 509 KEVAVRAPITINPHQSAKMAMDIMYENDVGRLAVVEKDDPQKLIGIITRSDVIRA 563



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ +SV + M K    +     ++     + + N +   VVD+  + +G++ F D+ R 
Sbjct: 441 LSEVSVGEAMHKEVITVSPLCRISEVRDGIYRCNYTGFPVVDE-GRLVGMITFDDIRRI 498



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 4/71 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGD 271
               +   +V  +  +   +        A+ I+ E   G +AVV  D+ QKL GIIT  D
Sbjct: 502 EQEKMTVKEV--AVRAPITINPHQSAKMAMDIMYENDVGRLAVVEKDDPQKLIGIITRSD 559

Query: 272 IFRNFHKDLNT 282
           + R + +++  
Sbjct: 560 VIRAYEREMKR 570


>gi|303246653|ref|ZP_07332931.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfovibrio fructosovorans JJ]
 gi|302491993|gb|EFL51871.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfovibrio fructosovorans JJ]
          Length = 628

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 50/129 (38%), Gaps = 2/129 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PGG  G           +   +  V  G  L  A  ++ + R G V V +    + GI+T
Sbjct: 158 PGGDDGDYLFTRLTGEVASHGLVCVARGTDLRRAAGVMEDGRVGSVLVRETSGSVIGIVT 217

Query: 269 EGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + D+ R   + +     VE +M     VI        A+  +    I  L+V  +    +
Sbjct: 218 DRDLRRAVARGIALAAPVETLMSAPVAVIDAGAPCFDALIRMTGGGIRHLLVT-EGGTPV 276

Query: 328 GIVHFLDLL 336
           G+V   DLL
Sbjct: 277 GMVTASDLL 285



 Score = 39.5 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 20/53 (37%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V       +   T L  A  ++    +  ++V +     IGIV   DL R 
Sbjct: 172 GEVASHGLVCVARGTDLRRAAGVMEDGRVGSVLVRETSGSVIGIVTDRDLRRA 224


>gi|168028312|ref|XP_001766672.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682104|gb|EDQ68525.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 570

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R     +VD    L GIIT+ D+  R   + L     SV  VM
Sbjct: 80  IPDGSTVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEDTSVSKVM 139

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            KNP  ++ DTL   A+Q + Q     L VV +  + + ++     L
Sbjct: 140 TKNPVFVMGDTLAVEALQKMVQGKFRHLPVV-ENGEVVALLDITKCL 185



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 3/114 (2%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
                 ++  G  +P       +  A   + E R   V +V    K  GI+T  D + R 
Sbjct: 233 RPTLGSIIPEGTKVPTCSASETVTAATKKMKENRMNSVIIVSPSNKPTGILTSKDVLMRV 292

Query: 276 FHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
             + L   T +++ VM  NP+    DT L  A+  +       L V D     +
Sbjct: 293 VAQGLPPETTTLDKVMTPNPECAGLDTTLVDALHTMHDGKFLHLPVTDRDGHIV 346



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 21/42 (50%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  +T A + ++++ ++ +++V    K  GI+   D+L
Sbjct: 248 TCSASETVTAATKKMKENRMNSVIIVSPSNKPTGILTSKDVL 289


>gi|56696685|ref|YP_167046.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding
           domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56678422|gb|AAV95088.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Ruegeria pomeroyi DSS-3]
          Length = 607

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/152 (15%), Positives = 48/152 (31%), Gaps = 4/152 (2%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           L   L+ +       F               +                  +  A   +  
Sbjct: 111 LFSDLMAAHPVVAKFFNRARAPRPQVQSLATSRVETLMARDPATCAPDTTVQAAAQEMRA 170

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAM 306
           +    + V  E   L GI+T+ D+      +       V+ VM   P  +    + +  +
Sbjct: 171 RSISSLCVC-EDGALVGILTQRDLSGKVVAEARSPDTPVDQVMTPAPLTLAPSAIGSDVL 229

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + + +I  + +V +  + +G+V   DL RF
Sbjct: 230 HAMMERHIGHIPIV-EAGRLVGMVTQTDLTRF 260


>gi|115358872|ref|YP_776010.1| signal-transduction protein [Burkholderia ambifaria AMMD]
 gi|115284160|gb|ABI89676.1| putative signal-transduction protein with CBS domains [Burkholderia
           ambifaria AMMD]
          Length = 153

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DAI +++EK  G + VV EG  + GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKTDFVYDAIKLMAEKGIGALLVV-EGDDIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVK 127



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 35/80 (43%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      ++M     +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYARKVVLQDRSSKATRVEEIM--TAKVRYVEPSQSTDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLIGLISIGDLVKSVIAD 132


>gi|324999636|ref|ZP_08120748.1| signal-transduction protein [Pseudonocardia sp. P1]
          Length = 141

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     + + +  ++E   G + VVD G+++ GI++E D+ R  H+    +    V ++M
Sbjct: 17  VSPDEAVTEVLRFITEGNLGALPVVD-GERIVGIVSERDVVRRLHQQGGAMLNARVSEIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                    D  +    +++ +  +  L VV       GIV   DL++  I
Sbjct: 76  TAEVVTCSPDDGVGDLAKIMTERRVRHLPVV-VDGVLSGIVSIGDLVKARI 125



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D  +T  ++ + + N+  L VVD  ++ +GIV   D++R
Sbjct: 15  TTVSPDEAVTEVLRFITEGNLGALPVVD-GERIVGIVSERDVVR 57


>gi|42779988|ref|NP_977235.1| RpiR family transcriptional regulator [Bacillus cereus ATCC 10987]
 gi|52144508|ref|YP_082321.1| RpiR family transcriptional regulator [Bacillus cereus E33L]
 gi|229089877|ref|ZP_04221132.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-42]
 gi|229183152|ref|ZP_04310382.1| Transcriptional regulator, RpiR [Bacillus cereus BGSC 6E1]
 gi|42735906|gb|AAS39843.1| transcriptional regulator, RpiR family, putative [Bacillus cereus
           ATCC 10987]
 gi|51977977|gb|AAU19527.1| transcriptional regulator, RpiR family [Bacillus cereus E33L]
 gi|228600291|gb|EEK57881.1| Transcriptional regulator, RpiR [Bacillus cereus BGSC 6E1]
 gi|228693502|gb|EEL47208.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-42]
 gi|324324867|gb|ADY20127.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar finitimus YBT-020]
          Length = 287

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|313885428|ref|ZP_07819178.1| inosine-5'-monophosphate dehydrogenase [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312619158|gb|EFR30597.1| inosine-5'-monophosphate dehydrogenase [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 493

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 40/184 (21%), Positives = 65/184 (35%), Gaps = 16/184 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 32  VDLSVELAPNLKLNVPIISASMDTVTEAPMAIAMARQGGLG-----VIHKNMSIAAQAEE 86

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIF 273
              V  S + + L          + +A  ++   R   V +V  +    L GIIT  D+ 
Sbjct: 87  VRKVKRSENGVILDPFYLTPQHMVREAEELMGRYRISGVPLVASESDLTLVGIITNRDMR 146

Query: 274 RNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             F K+ +   +E+VM            T L  A  +L ++ I  L +VD   K  G++ 
Sbjct: 147 --FIKNFDQA-IENVMTPKEELITAPVGTSLEEAEHILDRYRIEKLPLVDQEGKLSGLIT 203

Query: 332 FLDL 335
             D+
Sbjct: 204 IKDI 207



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 27/60 (45%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               +VM   + +    +G  L +A  IL   R   + +VD+  KL G+IT  DI +   
Sbjct: 153 QAIENVMTPKEELITAPVGTSLEEAEHILDRYRIEKLPLVDQEGKLSGLITIKDIEKVIE 212


>gi|150398194|ref|YP_001328661.1| signal-transduction protein [Sinorhizobium medicae WSM419]
 gi|150029709|gb|ABR61826.1| putative signal-transduction protein with CBS domains
           [Sinorhizobium medicae WSM419]
          Length = 223

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 51/128 (39%), Gaps = 24/128 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------FHKDLN--- 281
                +  A  ++ +     V VV++  +L G+I+EGD+ R             D+    
Sbjct: 15  SPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIRRTELCSGASVLMADMTIDP 74

Query: 282 -----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                      +  V DVM  +P  I E+  L     L+++  I  + V+    + +GIV
Sbjct: 75  VNRANAFIRRCSWRVGDVMTADPVTIEEEAPLARVAGLMQERGIKRIPVM-RDGELVGIV 133

Query: 331 HFLDLLRF 338
              DLL+ 
Sbjct: 134 SRADLLQA 141



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM      +  D  +  A +L+  +++S + VV+D  + +G++   DL+R
Sbjct: 3   VKDVMTTKVVKLSPDNSVRQAAKLMFDYHVSGVPVVNDDGRLLGVISEGDLIR 55


>gi|307594841|ref|YP_003901158.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550042|gb|ADN50107.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 146

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 3/121 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  +          ++     + +AI I+S +  G + +V+   K  G+I+E DI R   
Sbjct: 1   MSITVDKVIKREPLVINENATIKEAINIMSRENVGLLVIVNNAGKPIGVISERDIIRALA 60

Query: 278 KDLN-TLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  +    V +V        I     +  A  L+  H I  L+V+D+  K  G++   D+
Sbjct: 61  RGKDLNAKVTEVGTVGKLVTISPRDSIYKAALLMNDHKIRHLVVMDND-KLRGVISIRDI 119

Query: 336 L 336
           +
Sbjct: 120 I 120



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 37/57 (64%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++V+ V+ + P VI E+  +  A+ ++ + N+ +L++V++  K IG++   D++R 
Sbjct: 2   SITVDKVIKREPLVINENATIKEAINIMSRENVGLLVIVNNAGKPIGVISERDIIRA 58


>gi|261416837|ref|YP_003250520.1| inosine-5'-monophosphate dehydrogenase [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|261373293|gb|ACX76038.1| inosine-5'-monophosphate dehydrogenase [Fibrobacter succinogenes
           subsp. succinogenes S85]
 gi|302326791|gb|ADL25992.1| inosine-5'-monophosphate dehydrogenase [Fibrobacter succinogenes
           subsp. succinogenes S85]
          Length = 485

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 57/169 (33%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAI+L            ++H    +         V         
Sbjct: 40  NIPIISAAMDTVTTAPLAISLALQGGLG-----IIHKNMSIEDQAEEVRKVKRWQSGIVT 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +    P+  A    +  +     ++    KL G++T  D+      ++    +  V
Sbjct: 95  NPVTLDADEPVSAAFEQRARNKVSGFPIL-SKGKLVGMLTSRDLRTVSDMNV---KISTV 150

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP        L  A ++L +  I  L +VD      G++   D+L+
Sbjct: 151 MTKNPVTASPKVSLAKAKEILAEKRIEKLPLVDASGALKGLITMTDILK 199


>gi|114320893|ref|YP_742576.1| signal transduction protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114227287|gb|ABI57086.1| putative signal transduction protein with CBS domains
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 138

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNT 282
               +       P+++   +  EK  G + +  E  +L G++T+ DI  R     +D+ +
Sbjct: 7   MHRGVEWCAPDTPIMEIARLFREKDIGAIPI-GENDRLVGMLTDRDIVCRGLAEGRDVAS 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  DVM ++     ED  +  A+ L+ +H +  + V++  ++  G++   D+   
Sbjct: 66  MTAGDVMTRDIIYCWEDDDIEDAVHLMEEHRVRRVPVLNSDKRMTGMLSMGDISHA 121



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V   M +  +    DT +    +L R+ +I  + +  +  + +G++   D++  G+
Sbjct: 1   MKVNAAMHRGVEWCAPDTPIMEIARLFREKDIGAIPI-GENDRLVGMLTDRDIVCRGL 57


>gi|291485366|dbj|BAI86441.1| hypothetical protein BSNT_04276 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 442

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   VVD+  K+ GI+T  DI           S+E VM KNP  ++  T +  A Q
Sbjct: 222 ETGHGRFPVVDDQMKIHGILTSKDI----AGHDRNASIEKVMTKNPVTVIGKTSVASAAQ 277

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL V D  QK IG++   D+L+ 
Sbjct: 278 MMVWEGIEVLPVTDGHQKLIGMISRQDVLKA 308


>gi|268323851|emb|CBH37439.1| conserved hypothetical protein, DUF39 family and CBS domain pair
           family [uncultured archaeon]
          Length = 509

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + DA  ++ E +F  + V+ E   L+GI+T  DI          L  
Sbjct: 386 MIREVATISESASIADAAKLMMESQFTHIPVISEEGVLEGIVTAWDISTAVATRHEGL-- 443

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            ++M +N      +  L + ++ L ++NIS L V+D  ++ IG++ 
Sbjct: 444 AEIMTRNVITADSEEPLELVIRKLERYNISALPVIDRDRRVIGMIT 489



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V+DVMI+    I E   +  A +L+ +   + + V+ +     GIV   D+
Sbjct: 381 PVKDVMIREVATISESASIADAAKLMMESQFTHIPVISEEGVLEGIVTAWDI 432


>gi|296104237|ref|YP_003614383.1| putative DNA-binding transcriptional regulator [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
 gi|295058696|gb|ADF63434.1| putative DNA-binding transcriptional regulator [Enterobacter
           cloacae subsp. cloacae ATCC 13047]
          Length = 282

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++ ++L      +   +V  ++A + R+++TGIG SG +       L   G  + 
Sbjct: 104 KENVAAMHATLDVNTEEKLLESVAMLRAAR-RIILTGIGASGLVARNFGWKLTKIGYNAI 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +  +  DDL++ +S++G   E+      A R    ++AIT    + +  
Sbjct: 163 VEQDMHALLATVQAMDPDDLLLAISYTGERREINMATDEALRVGGKILAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  +S   Q+ + D L +AL++ 
Sbjct: 223 RATRCLYTIAEEQATR--SAAISSTSAQMMLTDLLFMALVQQ 262


>gi|295677672|ref|YP_003606196.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1002]
 gi|295437515|gb|ADG16685.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1002]
          Length = 281

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 7/172 (4%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + +      L  + ++L  +       A++ +   K R+   G G SG     +    
Sbjct: 94  AAKVLDRTIGALIQVRNNLSAD---SVAAAIDMLAQAK-RIEFYGAGGSGIAALDVQHKF 149

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G PS              ++   D+++ +S +G + ++      A      +IAIT 
Sbjct: 150 FRLGMPSVAYSDPHTFLMSAALLGPGDVVVAISNTGRTRDIIDAAKAALNAGAKVIAIT- 208

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              S +A  A + L    + ++     +P TS +  LAIGD LA+ +  SR 
Sbjct: 209 HGNSPLARLATVGLFANVDEDTDIF--SPMTSRVSHLAIGDILAVGVALSRG 258


>gi|224136197|ref|XP_002322269.1| predicted protein [Populus trichocarpa]
 gi|222869265|gb|EEF06396.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +  A   ++  R   + + D    L GI+T+ D+         +L    V  VM
Sbjct: 63  VPESTSIYQACCRMAAHRVDALLLTDSNSLLCGILTDKDLVSRVIACELNLEETPVSKVM 122

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L +TL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 123 TRNPVFVLSETLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 166



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 43/126 (34%), Gaps = 14/126 (11%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               S ++     I  V     +++    + E    C  V D             + R  
Sbjct: 216 RPAISTIIPENSKIVTVSPTETVLEVTKTMLESSSSCAVVTD------------ILMRVI 263

Query: 277 HKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            ++L  N+  VE VM  NP+    DT +  A+  +       L V+D     + ++  + 
Sbjct: 264 TQNLSPNSTLVEKVMTPNPECATIDTPIVDALHTMHDGKFLHLPVLDRDGNIVAVIDVIH 323

Query: 335 LLRFGI 340
           +    +
Sbjct: 324 ITHAAV 329


>gi|170696511|ref|ZP_02887635.1| putative signal-transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
 gi|170138558|gb|EDT06762.1| putative signal-transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
          Length = 146

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 5/117 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDL 280
                ++  +     + +AI ++++K  G + V D G  + GIITE D  R      +  
Sbjct: 10  TKPNTTVYTIGADDSVYEAIRLMADKGIGALVVTD-GDSIAGIITERDYARKVVLMDRSS 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               V ++M K  + +  D      M L+ +  +  L V+++  + IG+V   DL++
Sbjct: 69  KATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND-RLIGMVSIGDLVK 124



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+        +               ++  V+      D + +++E+R   + V+ 
Sbjct: 52  ITERDYA--RKVVLMDRSSKATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVI- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  +L G+++ GD+ +N 
Sbjct: 109 ENDRLIGMVSIGDLVKNI 126


>gi|16079979|ref|NP_390805.1| hypothetical protein BSU29270 [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|221310870|ref|ZP_03592717.1| hypothetical protein Bsubs1_15976 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221315196|ref|ZP_03597001.1| hypothetical protein BsubsN3_15877 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221320113|ref|ZP_03601407.1| hypothetical protein BsubsJ_15788 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221324395|ref|ZP_03605689.1| hypothetical protein BsubsS_15947 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321312463|ref|YP_004204750.1| hypothetical protein BSn5_05475 [Bacillus subtilis BSn5]
 gi|81637618|sp|O34921|YTOI_BACSU RecName: Full=Uncharacterized protein ytoI
 gi|2293258|gb|AAC00336.1| YtoI [Bacillus subtilis]
 gi|2635392|emb|CAB14887.1| conserved hypothetical protein [Bacillus subtilis subsp. subtilis
           str. 168]
 gi|320018737|gb|ADV93723.1| hypothetical protein BSn5_05475 [Bacillus subtilis BSn5]
          Length = 439

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/91 (35%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   VVD+  K+ GI+T  DI           S+E VM KNP  ++  T +  A Q
Sbjct: 219 ETGHGRFPVVDDQMKIHGILTSKDI----AGHDRNASIEKVMTKNPVTVIGKTSVASAAQ 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL V D  QK IG++   D+L+ 
Sbjct: 275 MMVWEGIEVLPVTDGHQKLIGMISRQDVLKA 305


>gi|269128219|ref|YP_003301589.1| RpiR family transcriptional regulator [Thermomonospora curvata DSM
           43183]
 gi|268313177|gb|ACY99551.1| transcriptional regulator, RpiR family [Thermomonospora curvata DSM
           43183]
          Length = 320

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 70/176 (39%), Gaps = 6/176 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  +   +   A+ R +    + L  ++  Q   AV        RV + G+G S  +  
Sbjct: 123 DSLEEIVEKVTFADARAVEETAAQLDIKVLEQVIDAV----VAASRVDVYGVGASAFVAM 178

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                L   G        A        ++   D+ + +S +G++ E    L  A+   + 
Sbjct: 179 DFQQKLHRIGRHCSAWSDAHIMLTSAAVLNPGDVAMGISHTGATVETIDALAVAKGRGVT 238

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +A+T+  KS +A  AD+VLT      +   G   T S + QL + D + + + + 
Sbjct: 239 TVAVTNFPKSPIAEVADLVLTTAARETTFRSGA--TASRLAQLTVIDCVFVGVAQR 292


>gi|268317662|ref|YP_003291381.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
 gi|262335196|gb|ACY48993.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
          Length = 644

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/152 (19%), Positives = 58/152 (38%), Gaps = 12/152 (7%)

Query: 199 FSENDFYVL------HPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRF 251
           F +ND               +G   +  + +       P+      P+ +A  I+  +R 
Sbjct: 132 FFDNDLAAFSARLRREQADAVGAPLLLNTPLCTLVRRSPIGCAPETPVQEAARIMRAERI 191

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           G + V+D  ++  GI+T  D+         L  + VE +M   P  I  D  +   + L+
Sbjct: 192 GSILVMDAERRPVGILTNSDLRDKVVAEGRLPDMPVEALMSAPPVTIAADAPILEGLVLM 251

Query: 310 RQHNISVLMVVDDC---QKAIGIVHFLDLLRF 338
            +H    L++ +D       +G++   D+   
Sbjct: 252 ARHGFHHLVLTEDGTAASPVVGVISGQDIAHA 283


>gi|171452350|dbj|BAG15866.1| hypothetical protein [Bruguiera gymnorhiza]
          Length = 237

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 58/162 (35%), Gaps = 29/162 (17%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P            + M   + + ++K    + +A+  L E       V+D+  KL G+++
Sbjct: 67  PVPAPREQTYKVGNFMIKKEDLLVLKTTTTVDEALVALVEDSVTGFPVIDDDWKLVGVVS 126

Query: 269 EGDIF-----------------------------RNFHKDLNTLSVEDVMIKNPKVILED 299
           + DI                              R      +   V D+M  NP V+ E 
Sbjct: 127 DYDILAIDSISGCSQIDRNVFPDVDLSWKTFNELRKILMKTHGKVVGDLMTPNPLVVHET 186

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           T +    +LL       L VVD   K +G++   D+++  ++
Sbjct: 187 TDIETVARLLLDTKYHRLPVVDSDDKLVGVIAREDVVKAALL 228


>gi|11499010|ref|NP_070244.1| chloride channel, putative [Archaeoglobus fulgidus DSM 4304]
 gi|2649157|gb|AAB89832.1| chloride channel, putative [Archaeoglobus fulgidus DSM 4304]
          Length = 589

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 56/125 (44%), Gaps = 3/125 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             V   D M S D + +V     + + + ++ +       VV +  +L G++T  D+ R 
Sbjct: 456 ENVRVQDAMVSADKLVVVTPYQRVSEVLELIEKTGHMGFPVVMD-GRLVGMVTFEDVERV 514

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFL 333
             ++ +   V D+M +   V   D  L  A+  L    I  L VVD  D +K +GI+   
Sbjct: 515 PLEERDKKLVRDIMTRELIVTYPDETLEEALIKLVDKGIGRLPVVDRNDEKKLLGIITRS 574

Query: 334 DLLRF 338
           D+++ 
Sbjct: 575 DIMKA 579



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNT 282
               + +      L +A+  L +K  G + VVD  + +KL GIIT  DI +   +++  
Sbjct: 528 MTRELIVTYPDETLEEALIKLVDKGIGRLPVVDRNDEKKLLGIITRSDIMKAHAREVKR 586


>gi|242070207|ref|XP_002450380.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
 gi|241936223|gb|EES09368.1| hypothetical protein SORBIDRAFT_05g004570 [Sorghum bicolor]
          Length = 511

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + +A   ++ +R   V + D G  L GI+T+ DI  R   + L      +  +M
Sbjct: 73  IPEGTTVSEACRRMAARRVDAVLLTDAGGLLSGIVTDKDIATRVIAEGLRVEQTIISKIM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  DT    A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPLYVTGDTPAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 176



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/71 (23%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 263 LKGIITEGD-----IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           L  IITE       + R   ++L+     VE VM  +P     DT +  A+ ++      
Sbjct: 229 LSTIITENTNSKDVLMRVVAQNLSPQLTLVEKVMTAHPDCATLDTTILDALHIMHDGKFL 288

Query: 316 VLMVVDDCQKA 326
            + V+D   + 
Sbjct: 289 HIPVLDGDGQV 299


>gi|312279329|gb|ADQ63986.1| Inosine-5'-monophosphate dehydrogenase [Streptococcus thermophilus
           ND03]
          Length = 493

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 28/197 (14%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLETKLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++       V +V+  E
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMERYHISGVPIVETLE 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
            +KL GIIT  D+    +       + + M     V     T L  A  +L +H I  L 
Sbjct: 133 NRKLVGIITNRDMRFISN---YETPISEHMTSEQLVTAPVGTDLETAESILHEHRIEKLP 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           +VD+  +  G++   D+
Sbjct: 190 LVDEEGRLSGLITIKDI 206


>gi|203288362|ref|YP_002223412.1| inosine-5'-monophosphate dehydrogenase [Borrelia recurrentis A1]
 gi|201085582|gb|ACH95155.1| inosine-5'-monophosphate dehydrogenase [Borrelia recurrentis A1]
          Length = 483

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 77/201 (38%), Gaps = 16/201 (7%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S++   + I+   + L        +   P  S+ M       +AIA+ +    
Sbjct: 9   ALTFDDVSLIPRKSSILPSDVNLKTRLTKNIYLNIPFLSSAMDTVTESRMAIAVAKEGGI 68

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITILSEKRFGCV 254
                 V+H    +         V     +  +     +     + +A  ++ +     +
Sbjct: 69  G-----VIHKNITIEKQRKEVEIVKSYHRNGIIRNLITINEDTSIKEARRLIVKHNISAL 123

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            V D   K+ G++T  DI      ++    V + M K      ED  L+ A ++L +H I
Sbjct: 124 PVTDHAGKILGLVTSRDIKYIADDNI---PVINAMTKKLITAKEDITLSEAKEILFKHKI 180

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             L++VD+     G++   D+
Sbjct: 181 EKLLIVDESNSLRGLITCKDI 201


>gi|55821983|ref|YP_140425.1| inosine 5'-monophosphate dehydrogenase [Streptococcus thermophilus
           LMG 18311]
 gi|55737968|gb|AAV61610.1| inosine monophosphate dehydrogenase [Streptococcus thermophilus LMG
           18311]
          Length = 493

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 28/197 (14%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLETKLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++       V +V+  E
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMERYHISGVPIVETLE 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
            +KL GIIT  D+    +       + + M     V     T L  A  +L +H I  L 
Sbjct: 133 NRKLVGIITNRDMRFISN---YETPISEHMTSEQLVTAPVGTDLETAESILHEHRIEKLP 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           +VD+  +  G++   D+
Sbjct: 190 LVDEEGRLSGLITIKDI 206


>gi|55823900|ref|YP_142341.1| inosine 5'-monophosphate dehydrogenase [Streptococcus thermophilus
           CNRZ1066]
 gi|116628674|ref|YP_821293.1| inosine 5'-monophosphate dehydrogenase [Streptococcus thermophilus
           LMD-9]
 gi|55739885|gb|AAV63526.1| inosine monophosphate dehydrogenase [Streptococcus thermophilus
           CNRZ1066]
 gi|116101951|gb|ABJ67097.1| inosine-5'-monophosphate dehydrogenase [Streptococcus thermophilus
           LMD-9]
          Length = 493

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 69/197 (35%), Gaps = 28/197 (14%)

Query: 159 VLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           VL +P E    P+                P  +A M       +AI++  +         
Sbjct: 18  VLLIPAESHVLPNNVNLKTKLAKNLTLNIPIITAAMDTVTDSKMAISIARAGGLG----- 72

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVD--E 259
           V+H    +         V  S + + +          + +A  ++       V +V+  E
Sbjct: 73  VIHKNMSIAEQAEEVRKVKRSENGVIIDPFFLTPEHKVSEAEELMERYHISGVPIVETLE 132

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLM 318
            +KL GIIT  D+    +       + + M     V     T L  A  +L +H I  L 
Sbjct: 133 NRKLVGIITNRDMRFISN---YETPISEHMTSEQLVTAPVGTDLETAESILHEHRIEKLP 189

Query: 319 VVDDCQKAIGIVHFLDL 335
           +VD+  +  G++   D+
Sbjct: 190 LVDEEGRLSGLITIKDI 206


>gi|302339945|ref|YP_003805151.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
           11293]
 gi|301637130|gb|ADK82557.1| CBS domain containing membrane protein [Spirochaeta smaragdinae DSM
           11293]
          Length = 413

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 55/133 (41%), Gaps = 20/133 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
             +          + + I  L ++    + V D+   + G++T+GD+ ++    +     
Sbjct: 122 MTEQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHGGMPIRLGLL 181

Query: 281 ---------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                          N  ++ ++M  +P+ I  D  ++ A+ L+ +  +  L VVD   K
Sbjct: 182 STLPKEERSTWMEKSNNRNLSEIMTPHPQTINADQKVSEALHLMVRKALKRLPVVDGNGK 241

Query: 326 AIGIVHFLDLLRF 338
             GI+  +DLLR 
Sbjct: 242 LCGILARIDLLRL 254



 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 14/111 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----------- 282
               PL +AI IL++K     AV+D  + L G++T+  + R   K  +T           
Sbjct: 290 PSHMPLREAIDILAQKAAQRAAVIDTDKHLVGLVTDSILMRVIDKKTSTILPLRRFAARR 349

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              L +  VM +    + E+T +  A++L+ +  +  + VVD   K  G++
Sbjct: 350 AESLQLSQVMKREVVRVTEETSVDEAIRLMTEQGLKRIPVVDAEGKFCGMI 400



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 26/58 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            L V DVM + P     D  +   +Q L   ++  L V D     +G+V   DL++ G
Sbjct: 115 HLLVRDVMTEQPVTAHPDWSVRETIQRLVDEHLKALPVTDKQGNVVGMVTQGDLMKHG 172



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 14/133 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                   +           +     + +A+ ++  K    + VVD   KL GI+   D+
Sbjct: 192 WMEKSNNRNLSEIMTPHPQTINADQKVSEALHLMVRKALKRLPVVDGNGKLCGILARIDL 251

Query: 273 FRNFHKDLNTLS--------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            R     + T                V DV++++   +     L  A+ +L Q       
Sbjct: 252 LRLLSSKVQTAHETSGPSTGGNQLQLVRDVVLRDRLALPSHMPLREAIDILAQKAAQRAA 311

Query: 319 VVDDCQKAIGIVH 331
           V+D  +  +G+V 
Sbjct: 312 VIDTDKHLVGLVT 324



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               +  V     + +AI +++E+    + VVD   K  G+I
Sbjct: 359 MKREVVRVTEETSVDEAIRLMTEQGLKRIPVVDAEGKFCGMI 400


>gi|254381614|ref|ZP_04996978.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340523|gb|EDX21489.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 208

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 48/106 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+ G P  +   +L E     V VVDE ++  G+++E D+ R         +   +M   
Sbjct: 17  VQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRKRSSGSGANTAAALMTSP 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  A +++R H +  L VVD   + IGI+   DLL+ 
Sbjct: 77  AITAQTEWSVVRAARVMRGHQVKRLPVVDAAGQLIGILSRSDLLQL 122



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   SV D+M      +   T      +LL++ +IS + VVD+ ++ +G+V   DLLR 
Sbjct: 1   MRHRSVADLMTPTAVSVQRGTPFKEIARLLKEFDISAVPVVDEAERPVGVVSEADLLRK 59


>gi|138894186|ref|YP_001124639.1| inosine-5-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|134265699|gb|ABO65894.1| Inosine-5-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
          Length = 136

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
              ++  V     + +A  I+S+K  G + VV E  ++KG+IT+ DI        KD   
Sbjct: 1   MTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ESGQVKGMITDRDITLRVTSQGKDPAA 59

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V DVM         +  +  A  ++ QH +  L +V +  +  GIV   D+
Sbjct: 60  VKVSDVMTNQVVTGTPNMSVQDAANVMAQHQVRRLPIV-ENNQLQGIVALGDI 111



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M KN   +  +  +  A Q++ Q NI  L VV +  +  G++   D+ 
Sbjct: 1   MTKNVATVSPNQTVQEAAQIMSQKNIGALPVV-ESGQVKGMITDRDIT 47


>gi|297519026|ref|ZP_06937412.1| D-arabinose 5-phosphate isomerase [Escherichia coli OP50]
          Length = 76

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 267 ITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            T+GD+ R        T  V + M      +   +    A ++L +  I+   VVD+  K
Sbjct: 1   FTDGDLRRWLVGGGALTTPVNEAMTVGGTTLQSQSRAIDAKEILMKRKITAAPVVDENGK 60

Query: 326 AIGIVHFLDLLRFGII 341
             G ++  D  + GII
Sbjct: 61  LTGAINLQDFYQAGII 76


>gi|188533181|ref|YP_001906978.1| inosine 5'-monophosphate dehydrogenase [Erwinia tasmaniensis
           Et1/99]
 gi|188028223|emb|CAO96081.1| Inosine-5'-monophosphate dehydrogenase [Erwinia tasmaniensis
           Et1/99]
          Length = 488

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL +L V  VM 
Sbjct: 98  QTVLPTTALSEVKALTERNGFAGYPVVNGENELVGIITGRDVR--FVTDL-SLPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLHKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|88855849|ref|ZP_01130512.1| inosine-5'-monophosphate dehydrogenase [marine actinobacterium
           PHSC20C1]
 gi|88815173|gb|EAR25032.1| inosine-5'-monophosphate dehydrogenase [marine actinobacterium
           PHSC20C1]
          Length = 500

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 60/167 (35%), Gaps = 10/167 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            +P  S+ M       LAIA+  +         VLH    +         V  S   +  
Sbjct: 44  SSPLISSAMDTVTEARLAIAMARNGGLG-----VLHRNLSIEDQAAYVDKVKRSESGMIT 98

Query: 233 VKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             +       + +   +  + R   V VV +   L GIIT  D+      ++ T  V DV
Sbjct: 99  NPVTTTQQATVAEVDALCGQFRVSGVPVVSDDGTLVGIITNRDMRFIEPAEMETTLVRDV 158

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   P            A+ LL +H I  L ++DD  K  G++   D
Sbjct: 159 MTTTPLITGHVGIGRDGAIALLNKHKIEKLPLIDDDGKLTGLITVKD 205



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 36/105 (34%), Gaps = 21/105 (20%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV------MI 290
             + +A   ++  R G + V               + RN   +     V+ V      MI
Sbjct: 53  DTVTEARLAIAMARNGGLGV---------------LHRNLSIEDQAAYVDKVKRSESGMI 97

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            NP    +   +     L  Q  +S + VV D    +GI+   D+
Sbjct: 98  TNPVTTTQQATVAEVDALCGQFRVSGVPVVSDDGTLVGIITNRDM 142


>gi|295703018|ref|YP_003596093.1| helix-turn-helix domain, rpiR family protein [Bacillus megaterium
           DSM 319]
 gi|294800677|gb|ADF37743.1| helix-turn-helix domain, rpiR family protein [Bacillus megaterium
           DSM 319]
          Length = 284

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 4/174 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N T+Q  ++        + SL  + +     +   AV  +   K  +   GIG S  I 
Sbjct: 89  TNETIQSIVK--KTASNSIQSLSDTAELVNYKEAERAVLALIEAKN-IHFFGIGASHIIA 145

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                        +     +  +   +   ++DD+++ +S+SG + E+  +L  A+   +
Sbjct: 146 MDAQQKFLRINKNATAFADSHLAATLIANASKDDVVVGISFSGETPEVSNVLSLAKNRGV 205

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I++T   +S V+  ADI L      +  P   A T+S + QL + D L +++
Sbjct: 206 KTISLTKYGQSTVSSLADICLYTS-YSQEAPFRSAATSSRLAQLYVIDVLFLSI 258


>gi|226952931|ref|ZP_03823395.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
 gi|226836252|gb|EEH68635.1| conserved hypothetical protein [Acinetobacter sp. ATCC 27244]
          Length = 143

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV E +K+ GI +E D  R      +  N+  V D+M
Sbjct: 19  ISPNSTVLEAIKIMADKGVGAL-VVAEDEKVIGIFSERDYTRKIALMERSSNSTLVADIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+++  K +G +   DL++ 
Sbjct: 78  TSKVITVSLNNTVEECLQLMTDRHLRHLPVLEND-KLVGFISIGDLVKA 125



 Score = 39.1 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+       +  +     +D+M S      V +   + + + +++++    + V+ 
Sbjct: 52  FSERDYTRKIALMERSSNSTLVADIMTSKVIT--VSLNNTVEECLQLMTDRHLRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E  KL G I+ GD+ +   +D   L
Sbjct: 109 ENDKLVGFISIGDLVKAAMEDQRIL 133



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  ++ +  A++++    +  L VV + +K IGI    D  R 
Sbjct: 18  TISPNSTVLEAIKIMADKGVGAL-VVAEDEKVIGIFSERDYTRK 60


>gi|224031159|gb|ACN34655.1| unknown [Zea mays]
          Length = 550

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     + +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM
Sbjct: 71  IPDHTTVHEACRRMASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVM 130

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +NP  +L DTL   A+Q + Q     L VV +  + I I+  
Sbjct: 131 TRNPVFVLADTLAVEALQKMVQGKFRHLPVV-ENGEVIAILDI 172



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +    AVV    K  GI+T  D + R   ++
Sbjct: 228 STIISENPKVVTVAPSDMVLTASKKMLELKV-SSAVVAIENKPGGILTSRDILMRVIAQN 286

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   + +VE VM ++P+    DT +  A+  +       L V+D     + +V  L +  
Sbjct: 287 LPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITH 346

Query: 338 FGI 340
             I
Sbjct: 347 AAI 349


>gi|209516332|ref|ZP_03265189.1| CBS domain containing protein [Burkholderia sp. H160]
 gi|209503268|gb|EEA03267.1| CBS domain containing protein [Burkholderia sp. H160]
          Length = 147

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSV 285
            +  +     + +AI +++EK  G + V D G  + GI+TE D  R      +      V
Sbjct: 16  DVYTIGADDSVYEAIRLMAEKGIGALVVTD-GDSIAGIVTERDYARKIVLMDRSSKATPV 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D+M K  + +  D      M L+ +  +  L V+    + IG+V   DL++
Sbjct: 75  RDIMSKAVRFVRPDQTTEECMALMTERRMRHLPVI-QNDRLIGMVSIGDLVK 125



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M    ++  V+      + + +++E+R   + V+ +
Sbjct: 54  TERDYARKIVLMDRSSKATPVRDIM--SKAVRFVRPDQTTEECMALMTERRMRHLPVI-Q 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ ++ 
Sbjct: 111 NDRLIGMVSIGDLVKDI 127


>gi|153004890|ref|YP_001379215.1| signal-transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028463|gb|ABS26231.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 481

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 48/136 (35%), Gaps = 6/136 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITE 269
           G+  TL + +            V +   + +A+  +   R   + V D G  L  GI T 
Sbjct: 5   GRRATLSMYSPLSAIVRRPPVTVPLDATVREALERMERTRIDSIVVTDPGGALPLGIFTL 64

Query: 270 GDIFRN--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+ R            +   M      +        A  L+ ++ +  ++VVD     +
Sbjct: 65  HDLLRRVTLPGGDLQQPIVAAMTGGLVTLRPQATAHQAALLMARNAMGHVVVVDAEGHLV 124

Query: 328 GIVHFLDLL---RFGI 340
           G+V   DL    R G+
Sbjct: 125 GVVSRDDLFGLQRVGV 140


>gi|15899317|ref|NP_343922.1| hypothetical protein SSO2588 [Sulfolobus solfataricus P2]
 gi|284173644|ref|ZP_06387613.1| hypothetical protein Ssol98_03188 [Sulfolobus solfataricus 98/2]
 gi|13815891|gb|AAK42712.1| Hypothetical protein SSO2588 [Sulfolobus solfataricus P2]
 gi|261601077|gb|ACX90680.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 142

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLS 284
             S  +VK+G   IDA  I+ +   G V +V+E     GI TE D+ R     KDLN   
Sbjct: 10  KRSPVVVKVGTKAIDACKIMYQNNIGSVVIVNEKDYPVGIFTERDVLRAVACGKDLND-K 68

Query: 285 VEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VE++        +  ++ +    + + ++NI  ++VVDD  K IG+V   D++   
Sbjct: 69  VENLGTFGKLVTVKSNSSIGEIAEKMVKNNIRHIVVVDDEGKLIGVVSIKDIVNEK 124



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 28/74 (37%), Gaps = 3/74 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D          G       + + +   +  VK    + +    + +     + VVD
Sbjct: 50  FTERDVLR---AVACGKDLNDKVENLGTFGKLVTVKSNSSIGEIAEKMVKNNIRHIVVVD 106

Query: 259 EGQKLKGIITEGDI 272
           +  KL G+++  DI
Sbjct: 107 DEGKLIGVVSIKDI 120


>gi|121604049|ref|YP_981378.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
 gi|120593018|gb|ABM36457.1| putative signal-transduction protein with CBS domains [Polaromonas
           naphthalenivorans CJ2]
          Length = 150

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK---DLNTLS 284
           + + +     + A  ++ +   G + VVD  E  +  GI+T+ D+         D    +
Sbjct: 13  VAVAEPETTALAAAQLMRKHHVGALIVVDALEKSRPLGIVTDRDLVLALMAEGLDPEVFT 72

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D+M     V   +     A+QL+R   +  L++ DD  + +G+V   D+L+ 
Sbjct: 73  AGDIMSVELVVASPEMDAMDAVQLMRSSRLRRLVIADDEGRLVGVVTMEDILQL 126



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
             ++D    +  V   +T    A QL+R+H++  L+VVD  +  + +GIV   DL+
Sbjct: 3   TRLKDFATVSVAVAEPETTALAAAQLMRKHHVGALIVVDALEKSRPLGIVTDRDLV 58



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 28/63 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +       +DA+ ++   R   + + D+  +L G++T  DI +   ++L  L+ 
Sbjct: 77  MSVELVVASPEMDAMDAVQLMRSSRLRRLVIADDEGRLVGVVTMEDILQLLTRELADLAA 136

Query: 286 EDV 288
             +
Sbjct: 137 AVI 139


>gi|47564757|ref|ZP_00235801.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
 gi|47558130|gb|EAL16454.1| transcriptional regulator, RpiR family [Bacillus cereus G9241]
          Length = 262

 Score = 85.3 bits (210), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 84  AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 142

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   A+
Sbjct: 143 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAN 202

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 203 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 241


>gi|288553902|ref|YP_003425837.1| CBS domain-containing protein [Bacillus pseudofirmus OF4]
 gi|288545062|gb|ADC48945.1| CBS domain protein [Bacillus pseudofirmus OF4]
          Length = 144

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMI 290
           V     + +A  ++ E   G + VV E  ++ G+IT+ DI            + V + M 
Sbjct: 16  VTPEQSIQEAAALMKEHNVGSIPVV-ENGQVAGMITDRDITLRSTAEGTSTHIPVRECMT 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            N  V         A  L+ QH I  L VVD+  + +G+V   DL
Sbjct: 75  SNLTVGTSTMDAHEAAALMAQHQIRRLPVVDN-GQLVGMVALGDL 118



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++M      +  +  +  A  L+++HN+  + VV +  +  G++   D+ 
Sbjct: 6   KNLMSTQVFSVTPEQSIQEAAALMKEHNVGSIPVV-ENGQVAGMITDRDIT 55


>gi|118476479|ref|YP_893630.1| RpiR family transcriptional regulator [Bacillus thuringiensis str.
           Al Hakam]
 gi|118415704|gb|ABK84123.1| transcriptional regulator, RpiR family [Bacillus thuringiensis str.
           Al Hakam]
          Length = 287

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|28973655|gb|AAO64148.1| unknown protein [Arabidopsis thaliana]
          Length = 536

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  VM
Sbjct: 73  INEGTTVFDACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTPVSKVM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITK 176



 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 6/159 (3%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
            G ALA A+   R++   +F  +    +        S ++     + LV    P+  A  
Sbjct: 191 QGSALATAVE-ERHWGSGNFAFIDTLRE-RMFKPALSTIVTENTKVALVSASDPVFVASK 248

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
            + + R   V ++  G K+ GI+T  D + R   ++L+     VE VM  NP+    +T 
Sbjct: 249 KMRDLRVNSV-IIAVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETT 307

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  A+ ++       L V D    A+  +  L +    I
Sbjct: 308 ILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAI 346


>gi|302533059|ref|ZP_07285401.1| oxidoreductase [Streptomyces sp. C]
 gi|302441954|gb|EFL13770.1| oxidoreductase [Streptomyces sp. C]
          Length = 140

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
           +  S       +   V+    L +A  ++ +   G V VVDE  +L GI+T+ D+  R  
Sbjct: 1   MTRSVHEVMTSNPVTVEKLTSLAEAARVMRDADIGDVLVVDE-GRLHGIVTDRDLVIRGM 59

Query: 277 H--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +D    +V  V   +P  +     +  A+ L+R++ +  L V  +  + +G+V   D
Sbjct: 60  AENRDPAETTVHAVCTTDPLTVRPGDDVHHAVALMRRNALRRLPVQTEDGELVGVVTLGD 119

Query: 335 L 335
           L
Sbjct: 120 L 120



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T SV +VM  NP  + + T L  A +++R  +I  ++VVD+  +  GIV   DL+
Sbjct: 2   TRSVHEVMTSNPVTVEKLTSLAEAARVMRDADIGDVLVVDE-GRLHGIVTDRDLV 55


>gi|27367316|ref|NP_762843.1| putative signal transduction protein [Vibrio vulnificus CMCP6]
 gi|27358885|gb|AAO07833.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus CMCP6]
          Length = 621

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           + ++I +VK+   + D    +  K+    AVV +G  + G++T+ D+  +     KD++ 
Sbjct: 162 ASENIAIVKVTDSIRDVALAMCGKQRSSCAVVMDGNDIVGLVTDRDMTASVVAKEKDVSE 221

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +E VM  NP +I  D  +  A+ L+ Q+NI  L VV +  K  G++    L+
Sbjct: 222 -RIESVMTLNPVLIESDAKVIQAISLMLQYNIRCLPVV-NHGKVAGLLTTTHLV 273


>gi|119387278|ref|YP_918312.1| cyclic nucleotide-binding protein [Paracoccus denitrificans PD1222]
 gi|119377853|gb|ABL72616.1| cyclic nucleotide-binding protein [Paracoccus denitrificans PD1222]
          Length = 603

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 55/131 (41%), Gaps = 4/131 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PG +   L +     +  G          P I+A   + + R   + V+D G +L G++T
Sbjct: 128 PGDRESALALLKVGDLIGGQVPLSCTPQTPAIEAARAMRDARVSSIGVLD-GDRLVGLVT 186

Query: 269 EGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
             DI  R   +  +  + V  VM  +P  +    L    + ++ +  I  L VV+   + 
Sbjct: 187 IRDISNRIVAEGRDANVPVAQVMTPDPITLSPLELGYDVLNIMLERRIGHLPVVEK-GRF 245

Query: 327 IGIVHFLDLLR 337
           +G+V   DL R
Sbjct: 246 VGMVSQTDLTR 256


>gi|307132051|ref|YP_003884067.1| IMP dehydrogenase [Dickeya dadantii 3937]
 gi|306529580|gb|ADM99510.1| IMP dehydrogenase [Dickeya dadantii 3937]
          Length = 487

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 58/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           +H    +       S V      + +
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGIG-----FIHKNMPIERQAEEVSRVKRHESGVVV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L     +     F    VV  G +L GIIT  D+   F  DL+   V  V
Sbjct: 96  DPQTVTPETTLRQVKQLTERNGFAGYPVVTTGNELVGIITGRDVR--FVTDLDR-PVSAV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E     V +Q + +  I   +VVD   + +G++   D  + 
Sbjct: 153 MTPKERLVTVKEGEARDVVLQKMHERRIEKALVVDTQFRLVGMITVKDFQKA 204


>gi|242240147|ref|YP_002988328.1| inosine 5'-monophosphate dehydrogenase [Dickeya dadantii Ech703]
 gi|242132204|gb|ACS86506.1| inosine-5'-monophosphate dehydrogenase [Dickeya dadantii Ech703]
          Length = 487

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           +H    +       S V      + +
Sbjct: 41  NVPMLSAAMDTVTESDLAIALAQEGGIG-----FIHKNMPIERQAEEVSRVKRHESGVVV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L     +     F    VV E  +L GIIT  D+   F  DL+   V  V
Sbjct: 96  DPQTVTPETTLRQVRELTERNGFAGYPVVTEHNELVGIITGRDVR--FVTDLDR-PVSAV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E     V +Q + +  I   +VVD     +G++   D  + 
Sbjct: 153 MTPKERLVTVKEGEAREVVLQKMHERRIEKALVVDGQFHLVGMITVKDFQKA 204


>gi|239927807|ref|ZP_04684760.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
 gi|291436148|ref|ZP_06575538.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
 gi|291339043|gb|EFE65999.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 141

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+ G  L++   ++  +  G   VV +GQ++ G++T+ DI  R   +  D   +S   V 
Sbjct: 16  VRPGASLVEVAQLMRSQNIG-DVVVADGQRVVGLLTDRDITVRAVAEGTDPLAVSAGSVC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  +  D  ++ A+ L+R+H +  + VV +    +G+V   DL R 
Sbjct: 75  TPDPVTLAPDAPVSTAVALMREHAVRRIPVV-ENGLPVGLVSLGDLARA 122



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM      +     L    QL+R  NI  ++V D  Q+ +G++   D+ 
Sbjct: 5   VKDVMTPGVVAVRPGASLVEVAQLMRSQNIGDVVVAD-GQRVVGLLTDRDIT 55


>gi|85709821|ref|ZP_01040886.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
 gi|85688531|gb|EAQ28535.1| hypothetical protein NAP1_13088 [Erythrobacter sp. NAP1]
          Length = 143

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
            ++  P+ +A+++L+ KR G + V+    K+ GII+E D+     +   D   ++V D+M
Sbjct: 18  CEVTTPVAEAVSLLAGKRIGALPVM-RDGKIAGIISERDVVYRLAESGHDALDMTVGDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 +   TL+  A+ L+ +       VVD+  K +  +   DL++  I
Sbjct: 77  TSPAVTVEPTTLIDDALALMTKRRFRHFPVVDND-KLVAFISIGDLVKHKI 126



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  V+    + DA+ +++++RF    VVD   KL   I+ GD+ ++
Sbjct: 76  MTSPAVTVEPTTLIDDALALMTKRRFRHFPVVDND-KLVAFISIGDLVKH 124


>gi|194017398|ref|ZP_03056010.1| CBS domain transcriptional regulator [Bacillus pumilus ATCC 7061]
 gi|194011266|gb|EDW20836.1| CBS domain transcriptional regulator [Bacillus pumilus ATCC 7061]
          Length = 440

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +     L        E   G   V D+  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIERTVYLSPEDKLEKWYEKNYETGHGRFPVADDQMKIHGILTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI         +  +E VM KNP  ++  T +  A Q++    I VL VVDD  K IG++
Sbjct: 242 DI----AGHDRSTPIEKVMTKNPLTVIGKTSVASAAQMMVWEGIEVLPVVDDYAKLIGMI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|158522990|ref|YP_001530860.1| signal transduction protein [Desulfococcus oleovorans Hxd3]
 gi|158511816|gb|ABW68783.1| putative signal transduction protein with CBS domains
           [Desulfococcus oleovorans Hxd3]
          Length = 423

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 57/160 (35%), Gaps = 25/160 (15%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+          T     +D+         V    P+ D + ++ +     VAVVD    
Sbjct: 261 DWNAFRSQKVDVTHLKQVADIAR--RDTHTVSPDTPVADVLRLIGDNDIQRVAVVDAENN 318

Query: 263 LKGIITEGDIFRNFHK-----------------------DLNTLSVEDVMIKNPKVILED 299
           L G+I++ D+ R F +                        L   +   VM      + E+
Sbjct: 319 LLGLISDKDLLRCFAQKQSGIWGLLSRVGSAFKHDEADTCLAGATAGTVMNTELITVKEE 378

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            L+  A+ L+ +  +  L VVD   +  G++    LLR G
Sbjct: 379 MLIEEAIGLMVERGLKRLPVVDAEGRFAGMISRDSLLRTG 418



 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  V    PL +   +L    F  V VVD+  +  G+IT+GD+ R           
Sbjct: 122 MTADPRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLIRKGGLPLRLGLL 181

Query: 275 ---------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                    +    +     E VM      I ED  L  A+ L+   N   L V D   +
Sbjct: 182 AESDQDRMKSVLSQMAGRQAEQVMTGPAVTIAEDRPLAEAVDLMISRNFKRLPVTDKEGR 241

Query: 326 AIGIVHFLDLLR 337
             G+V  LD+ R
Sbjct: 242 LCGMVSRLDIFR 253



 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 56/141 (39%), Gaps = 14/141 (9%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             + +                 +    PL +A+ ++  + F  + V D+  +L G+++  
Sbjct: 190 KSVLSQMAGRQAEQVMTGPAVTIAEDRPLAEAVDLMISRNFKRLPVTDKEGRLCGMVSRL 249

Query: 271 DIFRNFHKDLNTL--------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           DIFR   ++                   V D+  ++   +  DT +   ++L+  ++I  
Sbjct: 250 DIFRTVMREAPDWNAFRSQKVDVTHLKQVADIARRDTHTVSPDTPVADVLRLIGDNDIQR 309

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           + VVD     +G++   DLLR
Sbjct: 310 VAVVDAENNLLGLISDKDLLR 330



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             LSV DVM  +P+ +  +T L    +LL     + + VVD   + +G++   DL+R 
Sbjct: 114 RQLSVRDVMTADPRSVTSETPLDEVTRLLLSSIFTGVPVVDKKGRPVGVITQGDLIRK 171


>gi|20093964|ref|NP_613811.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
 gi|19886923|gb|AAM01741.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
          Length = 278

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 53/111 (47%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + ++     +  A+  + E   G + +V + +KL GIITE DI  + +  L    V
Sbjct: 89  MRTEVYVITPYDTVRKAVRTMFEFEVGALPIV-KDKKLVGIITERDIMADLYDVLEDTRV 147

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E++M ++P+ +  D  +  A +++       L VV +  +  G+V   D+L
Sbjct: 148 EEIMTEDPETVPSDITVLEAAEIMVDREFRRLPVV-ENGRLCGLVTATDVL 197



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 14/123 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
             +    V     +++A  I+ ++ F  + VV E  +L G++T  D+  +          
Sbjct: 151 MTEDPETVPSDITVLEAAEIMVDREFRRLPVV-ENGRLCGLVTATDVLHHVSSMATETSP 209

Query: 278 ----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +++  + VE++M ++   I  D  +  A   ++  N+  L VV +    IGI+   
Sbjct: 210 DASVEEVMDVPVEEIMTEDVITIEPDVNIEEAALTMKGANVGSL-VVTEGNDVIGIITER 268

Query: 334 DLL 336
           D++
Sbjct: 269 DIM 271



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +         + +  ++    + +A   +     G + VV EG  + GIITE DI  
Sbjct: 214 EEVMDVPVEEIMTEDVITIEPDVNIEEAALTMKGANVGSL-VVTEGNDVIGIITERDIMY 272

Query: 275 NFHK 278
              +
Sbjct: 273 AIAE 276


>gi|239625587|ref|ZP_04668618.1| inosine-5'-monophosphate dehydrogenase [Clostridiales bacterium
           1_7_47_FAA]
 gi|239519817|gb|EEQ59683.1| inosine-5'-monophosphate dehydrogenase [Clostridiales bacterium
           1_7_47FAA]
          Length = 484

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----VIHKNMSIAEQAEEVDRVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +   + + 
Sbjct: 96  DPFFLSADHTLRDANDLMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFDR-PIREC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   +  A  +L +  +  L +VD      G++   D+
Sbjct: 152 MTSRNLVTAREGVTMKEAKAILAKAKVEKLPIVDGDFNLKGLITIKDI 199


>gi|222444845|ref|ZP_03607360.1| hypothetical protein METSMIALI_00458 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434410|gb|EEE41575.1| hypothetical protein METSMIALI_00458 [Methanobrevibacter smithii
           DSM 2375]
          Length = 300

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K+   L +A  + +        V+D+  K  G+ T  D+ R    +   L V D+M  N 
Sbjct: 185 KVSSTLKEAAEVFAFNDIKGAPVMDD-GKAVGVFTVTDLVRAIANNKEDLLVGDLMTTNI 243

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ ED  +  A++++ +  IS +++ D+    +GIV   DL+
Sbjct: 244 VIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDLI 286



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 43/98 (43%), Gaps = 14/98 (14%)

Query: 250 RFGCVAVVDEG--QKLKG-------IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           R G   V + G   K+ G       ++ +    R+  K+    +V D+  ++   +   +
Sbjct: 133 RIGPTPVNNLGVMGKIVGRDDMDNILLVDTTTIRSIPKN----TVGDIASRDVVSLKVSS 188

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A ++   ++I    V+DD  KA+G+    DL+R 
Sbjct: 189 TLKEAAEVFAFNDIKGAPVMDD-GKAVGVFTVTDLVRA 225



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              +I +V     + +AI I+ +K    V + D    L GI+T  D+
Sbjct: 239 MTTNIVIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDL 285


>gi|322370216|ref|ZP_08044778.1| cbs domain containing protein [Haladaptatus paucihalophilus DX253]
 gi|320550552|gb|EFW92204.1| cbs domain containing protein [Haladaptatus paucihalophilus DX253]
          Length = 130

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
           K    L+D  +++SE+  GCV +VD G++  GI+T+  I  +     D +  +V DVM +
Sbjct: 7   KEETNLVDIASMMSEENVGCVPIVD-GRRPVGIVTDRKIALSLADEADASGRTVGDVMTR 65

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P  I  D  +  A++ +   +I  + VV+D +  +GIV   D+L
Sbjct: 66  DPITIDADASVHDAIERMEDADIRRIPVVEDEE-LVGIVTLDDVL 109


>gi|320160262|ref|YP_004173486.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila
           UNI-1]
 gi|319994115|dbj|BAJ62886.1| inosine-5'-monophosphate dehydrogenase [Anaerolinea thermophila
           UNI-1]
          Length = 481

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 67/168 (39%), Gaps = 6/168 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+           ++  P  ++  +           D+   
Sbjct: 44  KIPIVSANMDTVTETRMAIAMARQGGIGILHRFMTIP-QQVEMVERVKRAESMIVDNPIT 102

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +  A  +++E+  G + VV +  KL G++T  D+    + D     V  VM   
Sbjct: 103 IAASATVQQARELMAEREVGGLVVVSDEGKLLGMVTTRDVLLAVNGD---APVSQVMTPR 159

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V  ++  L  A + L QH I  L +VD+  + +G++   D+++ 
Sbjct: 160 ERLVVAGKEETLESAREKLYQHRIEKLPLVDENDRVVGLITAQDIVKI 207


>gi|325982652|ref|YP_004295054.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas sp. AL212]
 gi|325532171|gb|ADZ26892.1| inosine-5'-monophosphate dehydrogenase [Nitrosomonas sp. AL212]
          Length = 487

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 69/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H    +       + V         
Sbjct: 40  NIPLISAAMDTVTEAPLAIALAQEGGIG-----IIHKNMSIEAQAAHVAQVKRFESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + + + ++   +   + VV+ G+K+ GI+T  D+   F  +L+   ++ +
Sbjct: 95  DPITIHPNMTVREVLELIRRHKISGLPVVN-GKKVVGIVTNRDLR--FETNLDQA-IKHI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + EDT     + LL +H +  ++VVDD  +  G++   D+++
Sbjct: 151 MTPKSRLVTVKEDTTREAVLGLLHKHRLERVLVVDDNFELCGLITVKDIIK 201


>gi|229016151|ref|ZP_04173103.1| Transcriptional regulator, RpiR [Bacillus cereus AH1273]
 gi|229022388|ref|ZP_04178926.1| Transcriptional regulator, RpiR [Bacillus cereus AH1272]
 gi|228738869|gb|EEL89327.1| Transcriptional regulator, RpiR [Bacillus cereus AH1272]
 gi|228745105|gb|EEL95155.1| Transcriptional regulator, RpiR [Bacillus cereus AH1273]
          Length = 287

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|297583576|ref|YP_003699356.1| CBS domain-containing membrane protein [Bacillus selenitireducens
           MLS10]
 gi|297142033|gb|ADH98790.1| CBS domain containing membrane protein [Bacillus selenitireducens
           MLS10]
          Length = 214

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------HKDLNTLSVE 286
           K      DA+  +  K    + +VD+  +  GI+++ D+           H D   + V 
Sbjct: 15  KADMAAGDALEFMKHKHIRHLPIVDDDGQFIGIVSDRDLKDAAPSIFEKAHDDFIHVPVS 74

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VMI +    L    +  A   + +H IS L V +D  + +GI+   DLL
Sbjct: 75  KVMITDVITALPLDFVEEAAYTMVEHQISCLPV-EDDGRLVGIITETDLL 123



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M+K+      D     A++ ++  +I  L +VDD  + IGIV   DL
Sbjct: 3   VSDIMVKDVITAKADMAAGDALEFMKHKHIRHLPIVDDDGQFIGIVSDRDL 53


>gi|30260962|ref|NP_843339.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           Ames]
 gi|47526110|ref|YP_017459.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           'Ames Ancestor']
 gi|49183806|ref|YP_027058.1| RpiR family transcriptional regulator [Bacillus anthracis str.
           Sterne]
 gi|65318241|ref|ZP_00391200.1| COG1737: Transcriptional regulators [Bacillus anthracis str. A2012]
 gi|165873174|ref|ZP_02217788.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0488]
 gi|167636628|ref|ZP_02394920.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0442]
 gi|167641911|ref|ZP_02400148.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0193]
 gi|170689607|ref|ZP_02880791.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0465]
 gi|170709305|ref|ZP_02899722.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0389]
 gi|177655809|ref|ZP_02937051.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0174]
 gi|190568801|ref|ZP_03021704.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           Tsiankovskii-I]
 gi|196035199|ref|ZP_03102605.1| putative transcriptional regulator, RpiR family [Bacillus cereus W]
 gi|196037596|ref|ZP_03104907.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           NVH0597-99]
 gi|196046761|ref|ZP_03113984.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB108]
 gi|218902035|ref|YP_002449869.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH820]
 gi|225862796|ref|YP_002748174.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB102]
 gi|227816307|ref|YP_002816316.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. CDC 684]
 gi|228925995|ref|ZP_04089076.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228944564|ref|ZP_04106934.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228984013|ref|ZP_04144202.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229028617|ref|ZP_04184733.1| Transcriptional regulator, RpiR [Bacillus cereus AH1271]
 gi|229120456|ref|ZP_04249703.1| Transcriptional regulator, RpiR [Bacillus cereus 95/8201]
 gi|229154530|ref|ZP_04282647.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 4342]
 gi|229603953|ref|YP_002865403.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0248]
 gi|254682980|ref|ZP_05146841.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. CNEVA-9066]
 gi|254725767|ref|ZP_05187549.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. A1055]
 gi|254735129|ref|ZP_05192840.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Western North America USA6153]
 gi|254739959|ref|ZP_05197651.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Kruger B]
 gi|254753298|ref|ZP_05205334.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Vollum]
 gi|254757212|ref|ZP_05209240.1| putative transcriptional regulator, RpiR family protein [Bacillus
           anthracis str. Australia 94]
 gi|30254411|gb|AAP24825.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. Ames]
 gi|47501258|gb|AAT29934.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. 'Ames Ancestor']
 gi|49177733|gb|AAT53109.1| transcriptional regulator, RpiR family, putative [Bacillus
           anthracis str. Sterne]
 gi|164711085|gb|EDR16648.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0488]
 gi|167510112|gb|EDR85521.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0193]
 gi|167527960|gb|EDR90770.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0442]
 gi|170125773|gb|EDS94683.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0389]
 gi|170666451|gb|EDT17230.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0465]
 gi|172079972|gb|EDT65075.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0174]
 gi|190560038|gb|EDV14020.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           Tsiankovskii-I]
 gi|195992263|gb|EDX56225.1| putative transcriptional regulator, RpiR family [Bacillus cereus W]
 gi|196022473|gb|EDX61157.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB108]
 gi|196031838|gb|EDX70434.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           NVH0597-99]
 gi|218539126|gb|ACK91524.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH820]
 gi|225787970|gb|ACO28187.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           03BB102]
 gi|227003467|gb|ACP13210.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. CDC 684]
 gi|228628928|gb|EEK85638.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 4342]
 gi|228663041|gb|EEL18634.1| Transcriptional regulator, RpiR [Bacillus cereus 95/8201]
 gi|228732738|gb|EEL83604.1| Transcriptional regulator, RpiR [Bacillus cereus AH1271]
 gi|228775693|gb|EEM24070.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228815024|gb|EEM61275.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228833707|gb|EEM79263.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229268361|gb|ACQ49998.1| putative transcriptional regulator, RpiR family [Bacillus anthracis
           str. A0248]
          Length = 287

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|327401456|ref|YP_004342295.1| Cl- channel voltage-gated family protein [Archaeoglobus veneficus
           SNP6]
 gi|327316964|gb|AEA47580.1| Cl- channel voltage-gated family protein [Archaeoglobus veneficus
           SNP6]
          Length = 589

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/211 (19%), Positives = 83/211 (39%), Gaps = 14/211 (6%)

Query: 141 LIAITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +I +T++  S     +A     V   P         ++   + +  L +   +A  +   
Sbjct: 371 IIPVTAQPGSYVLIGMAAFVAGVAKTPIAAVLMVLEMSGGYNLLPALLLASTVAYYITGD 430

Query: 197 RNFSENDFY--VLHPGGKLGT-----LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           R+         +  P  +          +  S+ M   D I  V     ++D + ++ + 
Sbjct: 431 RSIYAEQVATKLESPAHRGELSVDILQKIKVSEAMTPADKIITVSPSSTVMDVLELIEKT 490

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                 VV E  +L GI+T  D+ +   ++  T SV ++M ++  V   D  L  A+  L
Sbjct: 491 GHIGFPVV-ENGRLVGIVTFEDVEKVPIEERETTSVGEIMSRSVIVTYPDESLEEALVKL 549

Query: 310 RQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
             ++I  L VV  +D  K +G++    ++R 
Sbjct: 550 ATYDIGRLPVVSREDEGKLLGLITRSAIIRA 580


>gi|269123714|ref|YP_003306291.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus
           moniliformis DSM 12112]
 gi|268315040|gb|ACZ01414.1| inosine-5'-monophosphate dehydrogenase [Streptobacillus
           moniliformis DSM 12112]
          Length = 486

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 71/166 (42%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+       F   +  +     ++  + +  S ++ +  ++
Sbjct: 41  NVPIISAAMDTVTEAELAIAIAREGGIGFIHKNMTIERQADEVSKVKIFESGMITNPITL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            +   G  L +A  I+ + +   + V++   +L GIIT  D+    +++  +  V DVM 
Sbjct: 101 NI---GSDLQEANDIMRKYKISGLPVINSENELLGIITNRDLK---YREDLSAKVVDVMT 154

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T    A Q+L +H I  L +V +  K  G++   D+
Sbjct: 155 KENLITAKVGTTFEQAKQILLEHRIEKLPIV-ENGKLKGLITIKDI 199



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 46/111 (41%), Gaps = 16/111 (14%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV-EDVMIKNPKV 295
             + +A   ++  R G +  + +   +               +++ + + E  MI NP  
Sbjct: 50  DTVTEAELAIAIAREGGIGFIHKNMTI----------ERQADEVSKVKIFESGMITNPIT 99

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-----LRFGII 341
           +   + L  A  ++R++ IS L V++   + +GI+   DL     L   ++
Sbjct: 100 LNIGSDLQEANDIMRKYKISGLPVINSENELLGIITNRDLKYREDLSAKVV 150


>gi|226495213|ref|NP_001151563.1| CBS domain containing protein [Zea mays]
 gi|195647750|gb|ACG43343.1| CBS domain containing protein [Zea mays]
          Length = 550

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     + +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM
Sbjct: 71  IPDHTTVHEACRRMASRRVDAVLLTDSNALLCGILTDKDITTRVIARELKMEETPVSKVM 130

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +NP  +L DTL   A+Q + Q     L VV +  + I I+  
Sbjct: 131 TRNPVFVLADTLAVEALQKMVQGKFRHLPVV-ENGEVIAILDI 172



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +    AVV    K  GI+T  D + R   ++
Sbjct: 228 STIISENPKVVTVAPSDMVLTASKKMLELKV-SSAVVAIENKPGGILTSRDILMRVIAQN 286

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   + +VE VM ++P+    DT +  A+  +       L V+D     + +V  L +  
Sbjct: 287 LPPESTTVEKVMTQSPECATVDTPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITH 346

Query: 338 FGI 340
             I
Sbjct: 347 AAI 349


>gi|260774487|ref|ZP_05883401.1| transcriptional regulator RpiR family [Vibrio metschnikovii CIP
           69.14]
 gi|260610614|gb|EEX35819.1| transcriptional regulator RpiR family [Vibrio metschnikovii CIP
           69.14]
          Length = 282

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 45/172 (26%), Positives = 70/172 (40%), Gaps = 6/172 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + + A+   +    ++L      QFH AV  I     RV I GIG S   G  LA  
Sbjct: 98  IAQKLVQAKTDAMFHTTNAL---CFEQFHHAVNWINQAH-RVQIVGIGGSALTGKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D+ I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALAEQDSHVQIATARTLRPQDVQIAISFSGDRKEVFIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  KS +   ADI L      +   H  +   S   Q  + D L I+L++ R
Sbjct: 214 APKKSKLRQLADIALDT--IADETQHRSSSIASRTAQNVLTDLLFISLVQQR 263


>gi|218662523|ref|ZP_03518453.1| DNA-binding transcriptional repressor RpiR [Rhizobium etli IE4771]
          Length = 234

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 41/199 (20%), Positives = 73/199 (36%), Gaps = 6/199 (3%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
            ++   +         ++S+ +   +        L    + L  +    F  A + + A 
Sbjct: 23  SYNKLPTAEMHQELSAEDSSAEIIQKVFRTSINALEETLAILDVD---AFDRAAD-LLAK 78

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
            G+    G+G S  I   +A      G        +        ++  DD+ I  S SG+
Sbjct: 79  PGQRDFYGVGGSAQIARDVAHKFLRIGVRCSVQDDSHMMLMSASLLGTDDVAIGFSHSGN 138

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +  +   +  AR+     IAIT+   S +A  ADIVL    +        A   + I QL
Sbjct: 139 TTAVIEAIQLARKSGARTIAITNYGGSALAQIADIVLCSTAQGSPLMGENA--AARIAQL 196

Query: 184 AIGDALAIALLESRNFSEN 202
            I DAL +A+ +    +  
Sbjct: 197 NILDALFMAVAKRNYQAAE 215


>gi|145590453|ref|YP_001152455.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282221|gb|ABP49803.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 128

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
                P+  A+  +     G V VVD      GIITE DI R   ++++    +E V  K
Sbjct: 15  CYADEPIECAVAKMYASNVGSVVVVDRTGSPVGIITERDIVRLLAEEVDFKTPLERVARK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N      D  +      + + NI  + VV +  + IG+V   D+LR 
Sbjct: 75  NLVTASPDDTVIATAAKMIEKNIRHIPVV-EGGRVIGVVSIRDVLRA 120



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 21/47 (44%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      D  +  A+  +   N+  ++VVD     +GI+   D++R 
Sbjct: 11  HLVYCYADEPIECAVAKMYASNVGSVVVVDRTGSPVGIITERDIVRL 57


>gi|22125261|ref|NP_668684.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis KIM 10]
 gi|45442509|ref|NP_994048.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51597149|ref|YP_071340.1| inosine 5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           IP 32953]
 gi|162421386|ref|YP_001605015.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis Angola]
 gi|165926021|ref|ZP_02221853.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165937035|ref|ZP_02225600.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008653|ref|ZP_02229551.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212403|ref|ZP_02238438.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167421274|ref|ZP_02313027.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423095|ref|ZP_02314848.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|270489883|ref|ZP_06206957.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis KIM D27]
 gi|294504566|ref|YP_003568628.1| inositol-5-monophosphate dehydrogenase [Yersinia pestis Z176003]
 gi|21958133|gb|AAM84935.1|AE013739_1 IMP dehydrogenase [Yersinia pestis KIM 10]
 gi|45437374|gb|AAS62925.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51590431|emb|CAH22071.1| inosine-5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           IP 32953]
 gi|162354201|gb|ABX88149.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis Angola]
 gi|165914898|gb|EDR33510.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165922225|gb|EDR39402.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165993035|gb|EDR45336.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206334|gb|EDR50814.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960763|gb|EDR56784.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167057265|gb|EDR67011.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|262362439|gb|ACY59160.1| inositol-5-monophosphate dehydrogenase [Yersinia pestis D106004]
 gi|262366554|gb|ACY63111.1| inositol-5-monophosphate dehydrogenase [Yersinia pestis D182038]
 gi|270338387|gb|EFA49164.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis KIM D27]
 gi|294355025|gb|ADE65366.1| inositol-5-monophosphate dehydrogenase [Yersinia pestis Z176003]
          Length = 515

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 79/219 (36%), Gaps = 16/219 (7%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  IL   R   I   A+T ++  +V  H+ +      L  +  +      P  SA M  
Sbjct: 23  LGEILPMLR---IAKEALTFDDVLLVPAHSTVLPNTAELGTQLTATIRLNIPMLSAAMDT 79

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L  
Sbjct: 80  VTESRLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEPQTVTPTTTLRQ 136

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              + +   F    VV E  +L GIIT  D+   F  DL+   V  VM        + E 
Sbjct: 137 VKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMTPKERLVTVKEG 193

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +Q + +  +  ++VVDD     G++   D  + 
Sbjct: 194 ETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKA 232


>gi|309389570|gb|ADO77450.1| transcriptional regulator, RpiR family [Halanaerobium praevalens
           DSM 2228]
          Length = 284

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 9/173 (5%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             ++ +++++      +   AV  I+     + I GIG SG +   L   L       F+
Sbjct: 105 DNINVIKNTINLLAISELKKAVAAIEKAAN-IYIFGIGASGLVAKDLEYKLMRIKKQVFY 163

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                A       +  +DL I +S+SG S E+   L  A+      IAI+   ++ ++  
Sbjct: 164 YSDTHAQLSLAANLDSNDLAIAISYSGESLEVCEALKIAKTRGAETIAISKYGENPLSEI 223

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           A+I L +    ++   G    TS I QL   D L +A      F++NDF  + 
Sbjct: 224 AEIKLQVAGSEKNLRLGAI--TSRIAQLVAIDILFVA------FAKNDFSKIR 268


>gi|167855482|ref|ZP_02478246.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parasuis 29755]
 gi|219870554|ref|YP_002474929.1| inosine 5'-monophosphate dehydrogenase [Haemophilus parasuis
           SH0165]
 gi|167853411|gb|EDS24661.1| inosine-5'-monophosphate dehydrogenase [Haemophilus parasuis 29755]
 gi|219690758|gb|ACL31981.1| inositol-5-monophosphate dehydrogenase [Haemophilus parasuis
           SH0165]
          Length = 487

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEAKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DLN   V  VM 
Sbjct: 98  VTVSPDLTLGELAELVKKNGFAGYPVVDAEDNLVGIITARDTR--FVRDLNK-PVSKVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  I E       ++L+  H +  +++VDD  K  G++   D  + 
Sbjct: 155 PKERLVTIKEGANREEILELMHDHRVEKVLMVDDNFKLKGMITVKDYQKA 204


>gi|94499933|ref|ZP_01306468.1| CBS domain protein [Oceanobacter sp. RED65]
 gi|94427791|gb|EAT12766.1| CBS domain protein [Oceanobacter sp. RED65]
          Length = 620

 Score = 85.0 bits (209), Expect = 1e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           +     +      +SE+R   + ++ E  +L GI+T+ DI  R   + L+    V  +M 
Sbjct: 167 ITPNTSIQSCAAQMSEERISSMLIM-ENDRLLGIVTDRDIRSRAVAQSLSYEAEVSVIMT 225

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + PK I     L  A   + Q  I  L V  +  K +G++   DL+
Sbjct: 226 EQPKYIEASKSLFDATLYMTQSGIHHLPV-QEDGKIVGVISASDLM 270



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + D+M      I  +T +      + +  IS ++++++  + +GIV   D+
Sbjct: 155 PIADLMSGEVFSITPNTSIQSCAAQMSEERISSMLIMEND-RLLGIVTDRDI 205


>gi|307727770|ref|YP_003910983.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1003]
 gi|307588295|gb|ADN61692.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1003]
          Length = 147

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 56/127 (44%), Gaps = 8/127 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               + ++ +  +   V        + +AI ++++K  G + V D G  + GI+TE D  
Sbjct: 1   MTTVAQLLKTKPNHTTVFTIGADDSVYEAIRLMADKGIGALVVTD-GDSIAGIVTERDYA 59

Query: 274 RN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M K  + +  D      M L+ +  +  L V+++  + +G+V
Sbjct: 60  RKVVLMDRSSKATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVIEND-RLVGMV 118

Query: 331 HFLDLLR 337
              DL++
Sbjct: 119 SIGDLVK 125



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        +               ++  V+      D + +++E+R   + V+ E
Sbjct: 54  TERDYA--RKVVLMDRSSKATPVREIMSKAVRFVRPDQTTDDCMALMTERRMRHLPVI-E 110

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ +N 
Sbjct: 111 NDRLVGMVSIGDLVKNI 127


>gi|288931696|ref|YP_003435756.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288893944|gb|ADC65481.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 308

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 51/130 (39%), Gaps = 4/130 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           G     L    ++ +       +V I       DA+ +L E+  G   ++D    + GII
Sbjct: 91  GRYNNNLLAAVNEEVKEIMEKDVVAIDFTSSWEDALEVLLERGVGGAPIIDREDTVIGII 150

Query: 268 TEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           TE DI +    +      VED M +       +T +  AM+ +    I  L VV      
Sbjct: 151 TERDIMKFLAERREYDGVVEDYMTRGVITAEPNTKIEEAMKTMVSKKIRRLPVV-KDGLL 209

Query: 327 IGIVHFLDLL 336
           +GI+    ++
Sbjct: 210 VGILTSTTIV 219



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 55/135 (40%), Gaps = 17/135 (12%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKD 279
           S +  +  ++  +     ++ A+  + +  F  + + D G ++L+GIIT  DI       
Sbjct: 24  SVMEIATKNVITIPPTSTIMSAMKTMIKYSFRRLPITDPGTKRLEGIITGMDIVNFLGGG 83

Query: 280 LNTLSVE----------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                VE                ++M K+   I   +    A+++L +  +    ++D  
Sbjct: 84  EKHKIVEGRYNNNLLAAVNEEVKEIMEKDVVAIDFTSSWEDALEVLLERGVGGAPIIDRE 143

Query: 324 QKAIGIVHFLDLLRF 338
              IGI+   D+++F
Sbjct: 144 DTVIGIITERDIMKF 158



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------------KDLN 281
           +    + +A+  +  K+   + VV +   L GI+T   I   F             K+  
Sbjct: 181 EPNTKIEEAMKTMVSKKIRRLPVV-KDGLLVGILTSTTIVHYFAGEVFKELVTGNAKEAL 239

Query: 282 TLSVEDVMI-------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  ++          P V+   T L   + L+ + N +  +VV       GI+   D
Sbjct: 240 ERPISAILSNKKILKYTEPLVVSPRTSLRDVVNLMLEKNQAAALVV-SSGNLEGIITERD 298

Query: 335 LLRF 338
           L++F
Sbjct: 299 LMKF 302



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 32/83 (38%), Gaps = 6/83 (7%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP-----LVKIGCPLIDAITILSEKRFGC 253
           F+   F  L  G     L    S ++ +   +      +V     L D + ++ EK    
Sbjct: 222 FAGEVFKELVTGNAKEALERPISAILSNKKILKYTEPLVVSPRTSLRDVVNLMLEKNQAA 281

Query: 254 VAVVDEGQKLKGIITEGDIFRNF 276
             VV     L+GIITE D+ +  
Sbjct: 282 ALVV-SSGNLEGIITERDLMKFL 303


>gi|163747559|ref|ZP_02154908.1| CBS [Oceanibulbus indolifex HEL-45]
 gi|161379156|gb|EDQ03576.1| CBS [Oceanibulbus indolifex HEL-45]
          Length = 144

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 44/115 (38%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +         + +A  ++ +K  G + VV++  +  GI+T+ DI             
Sbjct: 7   MTSNPTCCGPDNSVQEAAKLMDDKSVGSIPVVNDAGEPVGIVTDRDICCGAVAQGKGADT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V DVM K+      D  +      + +  +   +V DD  K  GIV   D+ R 
Sbjct: 67  RVSDVMSKDVLTASPDEDVESCCNKMEEKQVRRAVVTDDTGKCCGIVAQADVTRE 121



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+++M  NP     D  +  A +L+   ++  + VV+D  + +GIV   D+
Sbjct: 1   MQVQEIMTSNPTCCGPDNSVQEAAKLMDDKSVGSIPVVNDAGEPVGIVTDRDI 53


>gi|148657507|ref|YP_001277712.1| signal transduction protein [Roseiflexus sp. RS-1]
 gi|148569617|gb|ABQ91762.1| putative signal transduction protein with CBS domains [Roseiflexus
           sp. RS-1]
          Length = 212

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                +  V+   P+ DA+ +  +KR     V+    +L GI++E D+            
Sbjct: 6   RMSAPVITVEPKTPISDALMLFRQKRIRRAPVI-AHHRLVGIVSERDLLYASPSPVTSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ L+V++VM +    + EDT +  A +++    I  L V+    + +GI+  
Sbjct: 65  VWEMNYLLSKLTVDEVMTRQVVTVTEDTPIEEAARIMADKRIGGLPVM-RGHEVVGIITE 123

Query: 333 LDLLRF 338
            DL + 
Sbjct: 124 TDLFKI 129



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M      +   T ++ A+ L RQ  I    V+    + +GIV   DLL
Sbjct: 3   VGERMSAPVITVEPKTPISDALMLFRQKRIRRAPVI-AHHRLVGIVSERDLL 53



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    P+ +A  I+++KR G + V+  G ++ GIITE D+F+  
Sbjct: 81  MTRQVVTVTEDTPIEEAARIMADKRIGGLPVM-RGHEVVGIITETDLFKIL 130


>gi|75908381|ref|YP_322677.1| voltage gated Cl- channel protein [Anabaena variabilis ATCC 29413]
 gi|75702106|gb|ABA21782.1| Cl- channel, voltage gated [Anabaena variabilis ATCC 29413]
          Length = 862

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNP 293
               L +A    +        VV E  KL GIIT+ D+ ++  ++L     + ++M  NP
Sbjct: 452 ADITLEEAKQAFASSHHRGFPVV-EDNKLVGIITQSDLTKSLSRNLENHPHLREIMTANP 510

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +     L+  + LL ++ IS L VVD  QK IGI+   D++R
Sbjct: 511 MTVTPIHTLSNVLYLLDRYQISRLPVVD-GQKLIGIITRADIIR 553



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ ++ +DVM +  + +  D  L  A Q     +     VV +  K +GI+   DL +
Sbjct: 434 LSQMTAKDVMQQRVETLDADITLEEAKQAFASSHHRGFPVV-EDNKLVGIITQSDLTK 490


>gi|294650507|ref|ZP_06727866.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
 gi|292823650|gb|EFF82494.1| cystathionine beta-synthase [Acinetobacter haemolyticus ATCC 19194]
          Length = 143

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV E +K+ GI +E D  R      +  N+  V D+M
Sbjct: 19  ISPNSTVLEAIKIMADKGVGAL-VVAEDEKVIGIFSERDYTRKIALMERSSNSTLVADIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   +QL+   ++  L V+++  K +G +   DL++ 
Sbjct: 78  TSKVITVSLNNTVEECLQLMTDRHLRHLPVLEND-KLVGFISIGDLVKA 125



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 38/85 (44%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+       +  +     +D+M S      V +   + + + +++++    + V+ 
Sbjct: 52  FSERDYTRKIALMERSSNSTLVADIMTSKVIT--VSLNNTVEECLQLMTDRHLRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E  KL G I+ GD+ +   +D   L
Sbjct: 109 ENDKLVGFISIGDLVKAAMEDQRIL 133



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  ++ +  A++++    +  L VV + +K IGI    D  R 
Sbjct: 18  TISPNSTVLEAIKIMADKGVGAL-VVAEDEKVIGIFSERDYTRK 60


>gi|255065892|ref|ZP_05317747.1| inosine-5'-monophosphate dehydrogenase [Neisseria sicca ATCC 29256]
 gi|255049803|gb|EET45267.1| inosine-5'-monophosphate dehydrogenase [Neisseria sicca ATCC 29256]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRLDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+ +H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHEHKVERVLVLNEKDELKGLITVKDILK 203


>gi|315126561|ref|YP_004068564.1| hypothetical protein PSM_A1481 [Pseudoalteromonas sp. SM9913]
 gi|315015075|gb|ADT68413.1| hypothetical protein PSM_A1481 [Pseudoalteromonas sp. SM9913]
          Length = 631

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/147 (17%), Positives = 59/147 (40%), Gaps = 16/147 (10%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD------ 258
            ++               ++H       V +   + D   +++++    V V D      
Sbjct: 137 AIVEQADSNDLTTAKVKSLLHRDVVT--VTMQTAIQDVAFLMTQESVSSVLVTDIEKQIS 194

Query: 259 -----EGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                +  ++ GIIT+ DI  +   + L      ++VM  +  ++  +  +  A+  + +
Sbjct: 195 DDPEEDDGQVVGIITDRDIRTKVVAQGLTYDTPAKEVMTSSLVLLDSNAYVFEAVLAMLR 254

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N+  L VV   ++ IG++   D+LR+
Sbjct: 255 DNLHHLPVV-HKKRPIGVISLSDILRY 280


>gi|293190192|ref|ZP_06608688.1| inosine-5'-monophosphate dehydrogenase [Actinomyces odontolyticus
           F0309]
 gi|292821008|gb|EFF79961.1| inosine-5'-monophosphate dehydrogenase [Actinomyces odontolyticus
           F0309]
          Length = 507

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 58/171 (33%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            +LH    +         V  S     +
Sbjct: 47  RIPLLSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIEEQAAQVRQVKRSESGMVE 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +  ++    R   + VV+E   L GIIT  D+      +  TL V D 
Sbjct: 102 DPVTVGPDATIDELDSLCGHYRVSGLPVVNEDGTLLGIITNRDLRFVPQDEWATLHVRDC 161

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M       V         A  LL +H +  L +VDD     G++   D ++
Sbjct: 162 MTPRDQLVVGQVGISREHAKHLLAEHRVEKLPIVDDNDHLTGLITVKDFVK 212


>gi|228938084|ref|ZP_04100704.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228970959|ref|ZP_04131596.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228977563|ref|ZP_04137955.1| Transcriptional regulator, RpiR [Bacillus thuringiensis Bt407]
 gi|228782207|gb|EEM30393.1| Transcriptional regulator, RpiR [Bacillus thuringiensis Bt407]
 gi|228788768|gb|EEM36710.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228821569|gb|EEM67574.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|326938586|gb|AEA14482.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 287

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADLIVNA-NKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|150401060|ref|YP_001324826.1| CBS domain-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013763|gb|ABR56214.1| CBS domain containing protein [Methanococcus aeolicus Nankai-3]
          Length = 279

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-S 284
              +   VK    L D +   SEK  G   +VD+  KL  +ITE  I ++  +D+    +
Sbjct: 88  MASNPICVKETARLKDVLNTFSEKHIGGAPIVDKDNKLISMITERIILKSLKEDIGEKET 147

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VED M KNP V      +    + + ++    L VV    K IG +   D + F
Sbjct: 148 VEDYMTKNPVVASGGERIKDVARTMVRNEFRRLPVV-SHGKLIGKITSKDFIEF 200



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 19/128 (14%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIF------------- 273
           ++  ++     + DA+ I+ E     +AVVD G  +++G+++  DI              
Sbjct: 10  NNAIMIYPSTTIRDALQIMDESDIRRIAVVDAGSNRVEGVLSSVDIVDFMGGGSKYNLVK 69

Query: 274 ----RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
               RN +  +N   V+ +M  NP  + E   L   +    + +I    +VD   K I +
Sbjct: 70  SKHNRNLYAAINE-PVKSIMASNPICVKETARLKDVLNTFSEKHIGGAPIVDKDNKLISM 128

Query: 330 VHFLDLLR 337
           +    +L+
Sbjct: 129 ITERIILK 136



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 18/127 (14%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
           +   +  +   G  + D    +    F  + VV    KL G IT  D       D     
Sbjct: 151 YMTKNPVVASGGERIKDVARTMVRNEFRRLPVV-SHGKLIGKITSKDFIEFLGSDMVFEK 209

Query: 280 --------LNTLSVEDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                   L  + VED++   KNP  I  D  L  A++++ + N   L V+D   K +GI
Sbjct: 210 LKTGNIRELTNMRVEDIINGKKNP-TISNDAPLREAVEIMEKENTWALPVMDGS-KLVGI 267

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 268 ITEKDIL 274



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             G +  L     + + +G   P +    PL +A+ I+ ++    + V+D G KL GIIT
Sbjct: 211 KTGNIRELTNMRVEDIINGKKNPTISNDAPLREAVEIMEKENTWALPVMD-GSKLVGIIT 269

Query: 269 EGDIF 273
           E DI 
Sbjct: 270 EKDIL 274


>gi|311069425|ref|YP_003974348.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
 gi|310869942|gb|ADP33417.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
          Length = 439

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   VVD   K+ GI+T  DI         +  +E VM KNP  ++  T +  A Q
Sbjct: 219 ETGHGRFPVVDHQMKIHGILTSKDI----AGHDRSAPIEKVMTKNPVTVIGKTSVASAAQ 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL V D  QK IG++   D+L+ 
Sbjct: 275 MMVWEGIEVLPVTDKHQKLIGMISRQDVLKA 305


>gi|319761531|ref|YP_004125468.1| helix-turn-helix protein rpir [Alicycliphilus denitrificans BC]
 gi|330823400|ref|YP_004386703.1| RpiR family transcriptional regulator [Alicycliphilus denitrificans
           K601]
 gi|317116092|gb|ADU98580.1| helix-turn-helix protein RpiR [Alicycliphilus denitrificans BC]
 gi|329308772|gb|AEB83187.1| transcriptional regulator, RpiR family [Alicycliphilus
           denitrificans K601]
          Length = 281

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 53/166 (31%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++         +     A E I        R+   G G SG +           G  
Sbjct: 99  NAMAAFLQYRNAASTQLLERAAEAIAGTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGIT 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S              ++   D  +++S SG + +L      AR+     IAIT+   S +
Sbjct: 159 SLATSDGHMQVMSATLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPL 217

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A    I L          +  +P  S ++ L I D LA  +     
Sbjct: 218 AHSCRIHLAADHPEGYDRY--SPMVSRLLHLLIIDVLATCVALRIG 261


>gi|83589385|ref|YP_429394.1| diguanylate cyclase [Moorella thermoacetica ATCC 39073]
 gi|83572299|gb|ABC18851.1| diguanylate cyclase (GGDEF domain) [Moorella thermoacetica ATCC
           39073]
          Length = 290

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 6/102 (5%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     +  A  I+     G + VV E  KL GIIT  D+ R FH +     V D M 
Sbjct: 13  YTIDPLASVGRAAAIMERYGIGSLPVV-EEGKLVGIITSRDVRR-FHPNRL---VADAMT 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +    I     LT A +L+ ++ I  L+V  +    +GI+ +
Sbjct: 68  RKVITISPTASLTEAQKLMVKNKIERLVVTSESN-IVGIITY 108



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V+ ++ +    I     +  A  ++ ++ I  L VV++  K +GI+   D+ RF
Sbjct: 3   TVKSLISEKLYTIDPLASVGRAAAIMERYGIGSLPVVEE-GKLVGIITSRDVRRF 56


>gi|224003559|ref|XP_002291451.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973227|gb|EED91558.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 298

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 3/109 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TL 283
             +  +      ++    +L+ KR     + D+   + GIIT+ D+  R   K L+    
Sbjct: 8   PKAPIVSSSTDSVLSVTQMLASKRGDAAIITDQSGGMAGIITDTDVTRRVVAKHLSPSAT 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + DVM  NP  +      T A+  + ++    L V DD    +G++  
Sbjct: 68  PISDVMTANPTCVSMTDSATEALVTMVENRFRHLPVTDDNGAVVGVLDI 116



 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLS 284
               +V     L +   +++E R   + V  E   L GI    D+  R   K L  +  S
Sbjct: 186 KPSTMVGPSSSLQEVGELMAEARKAALIV--ENGNLIGIFGFKDMMSRAIAKQLRLDLTS 243

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  VM  NP+ +  DT +  A+Q++  +    L V +     IG+V  +D +
Sbjct: 244 VSTVMTPNPESVSPDTTVLEALQIMHDNKFLTLPVCEANGSVIGVVDVMDCV 295



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 3/58 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
              +   V +     +A+  + E RF  + V D+   + G++   DI +  +  ++ L
Sbjct: 73  MTANPTCVSMTDSATEALVTMVENRFRHLPVTDDNGAVVGVL---DIAKCLNDAISKL 127


>gi|291458957|ref|ZP_06598347.1| inosine-5'-monophosphate dehydrogenase [Oribacterium sp. oral taxon
           078 str. F0262]
 gi|291418211|gb|EFE91930.1| inosine-5'-monophosphate dehydrogenase [Oribacterium sp. oral taxon
           078 str. F0262]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 63/180 (35%), Gaps = 14/180 (7%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L            P  SA M       +AIA+            ++H    +       
Sbjct: 29  DLSTRLTDTIRLNIPFLSAGMDTVTEHQMAIAMARCGGIG-----IIHKNMTIEEQAEEV 83

Query: 221 SDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             V  S + +            L DA  ++++ R   V +   G +L GIIT  D+   F
Sbjct: 84  DMVKRSENGVITDPFFLSPEHSLKDANELMAKFRISGVPITV-GHRLVGIITNRDLV--F 140

Query: 277 HKDLNTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D  +  + D M  +N     E T L  A  +L +  +  L +VD      G++   D+
Sbjct: 141 EED-YSRPIRDCMTSENLVTAREGTTLEEAKAILAKAKVEKLPIVDAEGNLKGLITIKDI 199



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I +P  +  +  L  A +L+ +  IS + +     + +GI+   DL+
Sbjct: 94  ITDPFFLSPEHSLKDANELMAKFRISGVPIT-VGHRLVGIITNRDLV 139


>gi|242399292|ref|YP_002994716.1| inosine monophosphate dehydrogenase-like protein [Thermococcus
           sibiricus MM 739]
 gi|242265685|gb|ACS90367.1| inosine monophosphate dehydrogenase-like protein [Thermococcus
           sibiricus MM 739]
          Length = 390

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              + V     + P++++   L  A  ++ E     + V  + + + G+I++  +     
Sbjct: 64  PTKAKVKDVYKTAPILELDEDLSIAAKLMFETDLRSLPVGKDKKTILGVISDITLLERIA 123

Query: 278 KD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K+      VED M K+   +     +  A+  +R + IS + VVD+  K  G+V   DL+
Sbjct: 124 KEEFGKKKVEDFMTKDVVTLRSSDTVAKALATMRDYAISRIPVVDENGKLEGLVTLHDLI 183



 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 59/133 (44%), Gaps = 16/133 (12%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   + D + L      +  A+  + +     + VVDE  KL+G++T  D+   F K
Sbjct: 130 KKVEDFMTKDVVTLRSSDT-VAKALATMRDYAISRIPVVDENGKLEGLVTLHDLIIRFIK 188

Query: 279 DLN---------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                             ++ + DVMIK    +  +T++  A+ L+++++I  L++++  
Sbjct: 189 PRFRAQFGEVAGEKIPPFSMQLRDVMIKGVITVYPETMVREAISLIKEYDIDGLVIINQE 248

Query: 324 QKAIGIVHFLDLL 336
               G++   DLL
Sbjct: 249 NVVKGVLTVKDLL 261


>gi|261365078|ref|ZP_05977961.1| inosine-5'-monophosphate dehydrogenase [Neisseria mucosa ATCC
           25996]
 gi|288566503|gb|EFC88063.1| inosine-5'-monophosphate dehydrogenase [Neisseria mucosa ATCC
           25996]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 66/172 (38%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPITVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRLDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+ +H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHEHKVERVLVLNEKDELKGLITVKDILK 203


>gi|218232812|ref|YP_002365609.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           B4264]
 gi|218160769|gb|ACK60761.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           B4264]
          Length = 287

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADLIVNA-NKIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|21674116|ref|NP_662181.1| inosine-5'-monophosphate dehydrogenase [Chlorobium tepidum TLS]
 gi|25453054|sp|Q8KCW4|IMDH_CHLTE RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|21647272|gb|AAM72523.1| inosine-5'-monophosphate dehydrogenase [Chlorobium tepidum TLS]
          Length = 494

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 64/172 (37%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL  +        +  +     ++  +    S ++ +   +
Sbjct: 41  NIPLVSAAMDTVTEAELAIALARAGGIGIIHKNLSIDEQARQVAKVKRFESGIIRNPIHL 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTLSV 285
                   + DAI ++       + VV+         LKGI+T  D+      D    + 
Sbjct: 101 ---FEDATIQDAIDLMIRHSISGIPVVEHPTPEGCLLLKGIVTNRDLRMTASSDEKITT- 156

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +M  N     E   L  A  +L ++ I  L+++DD     G++ F D+ +
Sbjct: 157 --IMTTNLVTAKEGIDLLTAEDILMRNKIEKLLIIDDNGYLKGLITFKDIQK 206


>gi|300717942|ref|YP_003742745.1| Inosine-5\'-monophosphate dehydrogenase [Erwinia billingiae Eb661]
 gi|299063778|emb|CAX60898.1| Inosine-5\'-monophosphate dehydrogenase [Erwinia billingiae Eb661]
          Length = 488

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMPIERQAEEVRKVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L D   +     F    VV+   +L GIIT  D+   F  DL +L V  VM 
Sbjct: 98  QTVLPTTALSDVKVLTERNGFAGYPVVNGDNELVGIITGRDVR--FVTDL-SLPVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKDRLVTVREGEAREVVLHKMHEKRVEKALVVDDKFHLLGMITVKDFQKA 204


>gi|241765165|ref|ZP_04763151.1| transcriptional regulator, RpiR family [Acidovorax delafieldii 2AN]
 gi|241365170|gb|EER60031.1| transcriptional regulator, RpiR family [Acidovorax delafieldii 2AN]
          Length = 303

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 54/166 (32%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++         +     A E I +      R+   G G SG +           G  
Sbjct: 121 NAVAAFLQYRNAASTVALERAAEAITSTWRAGKRIEFYGAGNSGFVAQDAQHKFFRLGVT 180

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S              ++   D  +++S SG + +L       R+     IAIT+   S +
Sbjct: 181 SIATSDGHIQVMSATLLGPGDCAVIISNSGRTRDLMDAAEITRKNGATTIAITASG-SPL 239

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A   +I L          +  +P  S ++ L + D LA  +     
Sbjct: 240 ASACNIHLAADHPEGYDRY--SPMVSRLLHLLVIDVLATCVALRIG 283


>gi|33152556|ref|NP_873909.1| inositol-5-monophosphate dehydrogenase [Haemophilus ducreyi
           35000HP]
 gi|33148780|gb|AAP96298.1| inosine-5'-monophosphate dehydrogenase [Haemophilus ducreyi
           35000HP]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 98  VTVSPELTLAELAQLVKKNGFAGYPVVDNENNLVGIITGRDTR--FVQDL-TQTVSKVMT 154

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+      + L+ +H +  +++VDD  K  G++   D  + 
Sbjct: 155 HRDRLVTVKENAKREEILALMHEHRVEKVLMVDDAFKLKGMITVKDFQKA 204



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 20/66 (30%), Positives = 30/66 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  L    S VM   D +  VK      + + ++ E R   V +VD+  KLKG+IT  D 
Sbjct: 142 VQDLTQTVSKVMTHRDRLVTVKENAKREEILALMHEHRVEKVLMVDDAFKLKGMITVKDF 201

Query: 273 FRNFHK 278
            +   K
Sbjct: 202 QKAEQK 207


>gi|114321201|ref|YP_742884.1| cyclic nucleotide-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114227595|gb|ABI57394.1| cyclic nucleotide-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 663

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 51/138 (36%), Gaps = 6/138 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G   G   +               +    + +A+  +  +R G + V D+  +  G+ T
Sbjct: 182 KGLGNGDTSLDIPLGERLRREPVTCREETTIKEALQAMDTQRVGSIVVTDDRLRPLGVFT 241

Query: 269 EGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
             D+ R     +      + +VM  +P  +        A  ++ QH I  + VV +  + 
Sbjct: 242 LHDLLRRVALPQVPLDRPMREVMTSDPVSMPRSAFAFEAAMVMAQHGIHHVCVV-ERGRL 300

Query: 327 IGIVHFLDLL---RFGII 341
            G++   DL    R G++
Sbjct: 301 QGVISERDLFTLQRVGLV 318


>gi|170019156|ref|YP_001724110.1| putative DNA-binding transcriptional regulator [Escherichia coli
           ATCC 8739]
 gi|169754084|gb|ACA76783.1| transcriptional regulator, RpiR family [Escherichia coli ATCC 8739]
          Length = 282

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    + + + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQVSSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|328951661|ref|YP_004368996.1| putative signal transduction protein with CBS domains
           [Marinithermus hydrothermalis DSM 14884]
 gi|328451985|gb|AEB12886.1| putative signal transduction protein with CBS domains
           [Marinithermus hydrothermalis DSM 14884]
          Length = 135

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN 281
           +  +   +  V     + DA  ++++   G V VV EG +  G++T+ DI  R   + L+
Sbjct: 4   LEFARPDVVTVPPSASVADAARLMADINVGSVVVV-EGLRPVGVLTDRDITVRVVAEGLD 62

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                V  VM  +P  + E+  L  A++ ++   I    VVD   + +GI    D+L
Sbjct: 63  PEATPVRRVMTPDPVTLGEELSLFEALEEVKDKAIRRFPVVDPEGRLVGIFTLDDVL 119


>gi|323497525|ref|ZP_08102543.1| hypothetical protein VISI1226_01010 [Vibrio sinaloensis DSM 21326]
 gi|323317608|gb|EGA70601.1| hypothetical protein VISI1226_01010 [Vibrio sinaloensis DSM 21326]
          Length = 557

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                       +   + +V     + +    +  +R    AV+ E  ++ G+IT+ D+ 
Sbjct: 87  EKGLFIKRVDEVASGRVAVVTSDLSIREVAHTMLVQR-SPCAVIYEDNQIVGLITDRDMT 145

Query: 274 RNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +       +    + DVM  +P+ +  D L+  A  ++ Q NI  L VV    K +G++ 
Sbjct: 146 KRVIAVGASTDGPIRDVMTHSPQTVKPDDLVLHAASIMMQSNIRNLPVV-QDNKVVGLLT 204

Query: 332 FLDLLR 337
              L++
Sbjct: 205 TTHLVQ 210


>gi|77164137|ref|YP_342662.1| IMP dehydrogenase [Nitrosococcus oceani ATCC 19707]
 gi|254435784|ref|ZP_05049291.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus oceani AFC27]
 gi|76882451|gb|ABA57132.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus oceani ATCC
           19707]
 gi|207088895|gb|EDZ66167.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus oceani AFC27]
          Length = 486

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI+L +          ++H    +    V    V         
Sbjct: 40  NIPLVSAAMDTVTEAQLAISLAQEGGIG-----IIHKNMSVERQAVEVRKVKKFESGVIK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + +        V VV EG++L GI+T  D+     +      V  +
Sbjct: 95  EPITVAPDTSIGEVLALTRAHSISGVPVV-EGKQLVGIVTSRDLRF---ETRFDSPVSAI 150

Query: 289 MIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   P    + E       + LL Q+ I  ++VVDD  K  G++   D+ +  
Sbjct: 151 MTPQPRLITVPEGAERDEVVDLLHQYRIEKVLVVDDQFKLRGLITVKDIQKSK 203


>gi|88797922|ref|ZP_01113509.1| CBS-domain-containing protein [Reinekea sp. MED297]
 gi|88779119|gb|EAR10307.1| CBS-domain-containing protein [Reinekea sp. MED297]
          Length = 135

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/111 (30%), Positives = 58/111 (52%), Gaps = 13/111 (11%)

Query: 241 DAITILSEK-RFGCVAVVDEGQKLKGIITEGDIF------------RNFHKDLNTLSVED 287
           + +  +  K  F  + VV++  +LKGI+++ D+              +F   L  L+V D
Sbjct: 21  ETVREIFRKVSFHHLVVVNDHNELKGILSDRDMMAQIALWLDRNNGESFTDFLPRLTVGD 80

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM ++   +  +T +  A  LL ++ IS L V+D  QK IGIV + DLL++
Sbjct: 81  VMTRDVITVDAETPIDTASVLLLENRISSLPVIDVDQKVIGIVTWKDLLKY 131



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++V  +M +  + +  +       ++ R+ +   L+VV+D  +  GI+   D++
Sbjct: 1   MTVSTIMTRKVQTLTPENSFETVREIFRKVSFHHLVVVNDHNELKGILSDRDMM 54


>gi|149926562|ref|ZP_01914823.1| inosine-5'-monophosphate dehydrogenase [Limnobacter sp. MED105]
 gi|149824925|gb|EDM84139.1| inosine-5'-monophosphate dehydrogenase [Limnobacter sp. MED105]
          Length = 486

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NIPLVSAAMDTVTEARLAIAMAQEGGIGIVHKNLTATQQAAEVAKVKRHESGVLR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    +   I +  + +   + VV +  K+ GI+T  D+   F  +L+   V +VM 
Sbjct: 97  ITIEPELTVRQVIALTQQHKISGLPVV-KNGKVVGIVTNRDLR--FETNLDQ-PVSNVMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + ED  L  A  L+ +H +  ++V+D      G++   D+ + 
Sbjct: 153 PRERLVTVSEDDSLEQAKALMHKHRLERVLVMDADNTLKGLITVKDIQKA 202



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S+VM   + +  V     L  A  ++ + R   V V+D    LKG+IT  DI +     
Sbjct: 147 VSNVMTPRERLVTVSEDDSLEQAKALMHKHRLERVLVMDADNTLKGLITVKDIQKATEHP 206

Query: 280 LNTLSV 285
             +  +
Sbjct: 207 WASKDI 212


>gi|120554648|ref|YP_958999.1| inosine-5'-monophosphate dehydrogenase [Marinobacter aquaeolei VT8]
 gi|120324497|gb|ABM18812.1| inosine-5'-monophosphate dehydrogenase [Marinobacter aquaeolei VT8]
          Length = 494

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  V      +  +    S V+      
Sbjct: 48  NIPLVSAAMDTVTEAELAIAMAQEGGIGIMHKNMTVEQQAAAVRKVKKFESGVV---KDP 104

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V  G  + + + I        + VVD G  L GI+T  DI      D     V D+M 
Sbjct: 105 ITVSPGTTVRELVDITMANNISGLPVVD-GNDLVGIVTGRDIRFESRMD---TPVRDIMT 160

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E   L    +LL +H I  ++VV+D  +  G++   D+ +  
Sbjct: 161 PKDKLVTVKEGADLEEVKELLHRHRIEKVLVVNDEFQLRGLITVKDIQKAK 211


>gi|104784043|ref|YP_610541.1| nucleotidyltransferase domain-containing protein [Pseudomonas
           entomophila L48]
 gi|95113030|emb|CAK17758.1| putative nucleotidyltransferase, CBS domain/cAMP binding
           [Pseudomonas entomophila L48]
          Length = 645

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 3/110 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--V 285
               +   G PL +A+ ++ E++ G + +VD+ +   GI T  D+ +        L+  +
Sbjct: 185 RHPVVCTAGTPLREAVRLMHEQQVGSIVIVDDQRHPTGIFTLRDLRQVVADASAELTAPI 244

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E  M   P  +        A   + + +I+ + +V + Q+  G++   DL
Sbjct: 245 ERYMTARPFSLSPQASAFDAAMAMTERHIAHVCLV-ENQRLCGVISERDL 293



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V    T L  A++L+ +  +  +++VDD +   GI    DL
Sbjct: 176 NTPLGELALRHPVVCTAGTPLREAVRLMHEQQVGSIVIVDDQRHPTGIFTLRDL 229


>gi|14590193|ref|NP_142258.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           horikoshii OT3]
 gi|3256656|dbj|BAA29339.1| 178aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 178

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/115 (29%), Positives = 55/115 (47%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
                +VK    +     +LS+ + G   V+D+G+ L G++TE DI        KD   +
Sbjct: 12  KRKAVVVKPTDSVHKVAKVLSKNKVGSAVVMDKGEVL-GVVTERDILDKVVAKGKDPKEV 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE++M KNP  I  D  +  A++L+ +  +  ++V     K IG V   DLL  
Sbjct: 71  KVEEIMTKNPVKIEYDYDVQDAIELMTEKGVRRILVT-KFGKPIGFVTATDLLAA 124


>gi|150391376|ref|YP_001321425.1| signal-transduction protein [Alkaliphilus metalliredigens QYMF]
 gi|149951238|gb|ABR49766.1| putative signal-transduction protein with CBS domains [Alkaliphilus
           metalliredigens QYMF]
          Length = 144

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
               +   +    + +   I+     G V V ++  +  GI+T+ DI  R     L    
Sbjct: 7   MTSQVSFAQQNSTVNEVAQIMKSLDIGSVPVCNQQNQPVGIVTDRDIVIRGLTAGLQATD 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++E VM +N   +  +T +  A +++ ++ I  L VV +  + +G++   DL
Sbjct: 67  TIERVMTQNLVSVSPETDIHEAARVMGENQIRRLPVV-ENGQIVGMLAIGDL 117



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 29/58 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V++VM        +++ +    Q+++  +I  + V +   + +GIV   D++  G+
Sbjct: 1   MKVKEVMTSQVSFAQQNSTVNEVAQIMKSLDIGSVPVCNQQNQPVGIVTDRDIVIRGL 58


>gi|303243727|ref|ZP_07330068.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302485969|gb|EFL48892.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 154

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 54/151 (35%), Gaps = 35/151 (23%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           +V        +V     + + I +  + +     V+D+ + L GII+E DI +      +
Sbjct: 3   NVESVMKKPIVVNQNNDVREVIKLFRKYKISGAPVIDDDRNLVGIISESDIIKTLTTHDD 62

Query: 282 ----------------------------------TLSVEDVMIKNPKVILEDTLLTVAMQ 307
                                                V+DVM K+   +  DT +  A +
Sbjct: 63  RFDIILPSPFDLIELPLKTTLKIEEFREDIEKALKTKVKDVMTKDVITVSPDTPINEAAE 122

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ +H I  L V+    + +GIV   DL+  
Sbjct: 123 IMIKHKIKRLPVI-KNGELVGIVTRGDLIEA 152



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    P+ +A  I+ + +   + V+ +  +L GI+T GD+    
Sbjct: 104 MTKDVITVSPDTPINEAAEIMIKHKIKRLPVI-KNGELVGIVTRGDLIEAL 153


>gi|289706602|ref|ZP_06502952.1| inosine-5'-monophosphate dehydrogenase [Micrococcus luteus SK58]
 gi|289556737|gb|EFD50078.1| inosine-5'-monophosphate dehydrogenase [Micrococcus luteus SK58]
          Length = 514

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+            ++H    +         V  S      
Sbjct: 57  NIPIVSAAMDTVTEAPLAIAMARQGG-----MGIIHRNLSIEDQARHVDTVKRSESGMIK 111

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L D   + ++ R   + VV E   L GIIT  D      ++  T +V+  
Sbjct: 112 DPVTIGPDATLADLDELCAQYRVSGLPVVAEDMTLLGIITNRDTRFIPREEWATRTVDTA 171

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + P     E       ++L  Q+ +  L +VDD  +  G++   D  + 
Sbjct: 172 MTRMPLVTAQEGVSRAETIRLFSQNRVEKLPLVDDAGRLTGLITIKDFDKA 222


>gi|262040240|ref|ZP_06013491.1| inosine-5'-monophosphate dehydrogenase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
 gi|259042349|gb|EEW43369.1| inosine-5'-monophosphate dehydrogenase [Klebsiella pneumoniae
           subsp. rhinoscleromatis ATCC 13884]
          Length = 502

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 6   LSTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 65

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 66  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 122

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 123 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 179

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V    + +  +   +VVD+     G++   D  + 
Sbjct: 180 ESREVVFAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 218


>gi|257126435|ref|YP_003164549.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia buccalis
           C-1013-b]
 gi|257050374|gb|ACV39558.1| inosine-5'-monophosphate dehydrogenase [Leptotrichia buccalis
           C-1013-b]
          Length = 491

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/166 (25%), Positives = 70/166 (42%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL       F   +  +     ++  +    S ++    + 
Sbjct: 45  NIPILSAAMDTVTESKLAIALAREGGIGFIHKNMTIERQAEEVSKVKRYESGMI---TNP 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +K    L DA  ++   +   + VVD+   LKGIIT  D+   + +DL++  V D+M 
Sbjct: 102 ITLKEDAILKDANDLMKTYKVSGLPVVDDEGNLKGIITNRDLK--YREDLSSKVV-DIMT 158

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K N       T L  A  +L ++ I  L +V +  K  G++   D+
Sbjct: 159 KDNLVTAPVGTTLEGAKSILLENRIEKLPIV-EGTKLKGLITIKDI 203


>gi|206967641|ref|ZP_03228597.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH1134]
 gi|228919668|ref|ZP_04083030.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|229068493|ref|ZP_04201794.1| Transcriptional regulator, RpiR [Bacillus cereus F65185]
 gi|229078133|ref|ZP_04210718.1| Transcriptional regulator, RpiR [Bacillus cereus Rock4-2]
 gi|229177344|ref|ZP_04304728.1| Transcriptional regulator, RpiR [Bacillus cereus 172560W]
 gi|229189028|ref|ZP_04316056.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 10876]
 gi|206736561|gb|EDZ53708.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH1134]
 gi|228594448|gb|EEK52239.1| Transcriptional regulator, RpiR [Bacillus cereus ATCC 10876]
 gi|228606223|gb|EEK63660.1| Transcriptional regulator, RpiR [Bacillus cereus 172560W]
 gi|228705178|gb|EEL57579.1| Transcriptional regulator, RpiR [Bacillus cereus Rock4-2]
 gi|228714635|gb|EEL66509.1| Transcriptional regulator, RpiR [Bacillus cereus F65185]
 gi|228840022|gb|EEM85301.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
          Length = 287

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|15677250|ref|NP_274403.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis MC58]
 gi|161870263|ref|YP_001599433.1| transcriptional regulator [Neisseria meningitidis 053442]
 gi|218768404|ref|YP_002342916.1| putative transcriptional regulator [Neisseria meningitidis Z2491]
 gi|254805183|ref|YP_003083404.1| putative RpiR-family transcriptional regulator [Neisseria
           meningitidis alpha14]
 gi|296315284|ref|ZP_06865225.1| transcriptional regulator HexR [Neisseria polysaccharea ATCC 43768]
 gi|304387281|ref|ZP_07369474.1| transcriptional regulator HexR [Neisseria meningitidis ATCC 13091]
 gi|7226627|gb|AAF41753.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis MC58]
 gi|121052412|emb|CAM08746.1| putative transcriptional regulator [Neisseria meningitidis Z2491]
 gi|161595816|gb|ABX73476.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           meningitidis 053442]
 gi|254668725|emb|CBA06535.1| putative RpiR-family transcriptional regulator [Neisseria
           meningitidis alpha14]
 gi|254669843|emb|CBA04248.1| putative regulatory protein [Neisseria meningitidis alpha153]
 gi|261392339|emb|CAX49872.1| HTH-type transcriptional repressor HexR (hex regulon repressor)
           [Neisseria meningitidis 8013]
 gi|296837780|gb|EFH21718.1| transcriptional regulator HexR [Neisseria polysaccharea ATCC 43768]
 gi|304338664|gb|EFM04781.1| transcriptional regulator HexR [Neisseria meningitidis ATCC 13091]
 gi|308389506|gb|ADO31826.1| RpiR/YebK/YfhH family protein [Neisseria meningitidis alpha710]
 gi|316984210|gb|EFV63188.1| helix-turn-helix domain, rpiR family protein [Neisseria
           meningitidis H44/76]
 gi|319410651|emb|CBY91023.1| HTH-type transcriptional repressor HexR (hex regulon repressor)
           [Neisseria meningitidis WUE 2594]
 gi|325128423|gb|EGC51304.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           N1568]
 gi|325130458|gb|EGC53218.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           OX99.30304]
 gi|325132418|gb|EGC55111.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M6190]
 gi|325134376|gb|EGC57021.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M13399]
 gi|325136785|gb|EGC59384.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M0579]
 gi|325138408|gb|EGC60976.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           ES14902]
 gi|325140393|gb|EGC62914.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           CU385]
 gi|325142579|gb|EGC64974.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           961-5945]
 gi|325144677|gb|EGC66975.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240013]
 gi|325198532|gb|ADY93988.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           G2136]
 gi|325199992|gb|ADY95447.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           H44/76]
 gi|325201902|gb|ADY97356.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240149]
 gi|325204381|gb|ADY99834.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M01-240355]
 gi|325205845|gb|ADZ01298.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           M04-240196]
 gi|325208346|gb|ADZ03798.1| transcriptional regulator, RpiR family [Neisseria meningitidis
           NZ-05/33]
          Length = 282

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              + +    +  A  S++ E+R L             +   A+  +   + RV   G+G
Sbjct: 88  DDMASVVEKVLGNAAASLLGERRFLKE----------SELENAIATLMHAR-RVEFYGVG 136

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG +           G  +              +++  D+++ +S +GSS EL   +  
Sbjct: 137 NSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSI 196

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +IA+T    S +A  AD VL      +       P  S ++QLA+ D LAI L
Sbjct: 197 AKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAVIDILAIGL 253

Query: 194 LESRN 198
                
Sbjct: 254 ALRLG 258


>gi|237653288|ref|YP_002889602.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T]
 gi|237624535|gb|ACR01225.1| inosine-5'-monophosphate dehydrogenase [Thauera sp. MZ1T]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 66/167 (39%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           L P  +   +                
Sbjct: 40  NVPLVSAAMDTVTESRLAIALAQEGGIGVVH-KNLTPAQQAAEVLKVKRHESGILKDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     + + I +  + RF  V VV EG K+ GI+T  D    F   L+ L V ++M   
Sbjct: 99  IPPTMTVGEVIALQRQNRFSGVPVV-EGGKVVGIVTNRDTR--FETKLDQL-VSEIMTPQ 154

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E   L  A +LLR H +  ++V++D  +  G++   D+++
Sbjct: 155 DRLVTVREGASLEEARELLRVHRLERVLVLNDAGELCGLITVKDMMK 201


>gi|239918135|ref|YP_002957693.1| inosine-5'-monophosphate dehydrogenase [Micrococcus luteus NCTC
           2665]
 gi|281415676|ref|ZP_06247418.1| inosine-5'-monophosphate dehydrogenase [Micrococcus luteus NCTC
           2665]
 gi|239839342|gb|ACS31139.1| inosine-5'-monophosphate dehydrogenase [Micrococcus luteus NCTC
           2665]
          Length = 514

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 59/171 (34%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+            ++H    +         V  S      
Sbjct: 57  NIPIVSAAMDTVTEAPLAIAMARQGG-----MGIIHRNLSIEDQARHVDTVKRSESGMIK 111

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     L D   + ++ R   + VV E   L GIIT  D      ++  T +V+  
Sbjct: 112 DPVTIGPDATLADLDELCAQYRVSGLPVVAEDMTLLGIITNRDTRFIPREEWATRTVDTA 171

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + P     E       ++L  Q+ +  L +VDD  +  G++   D  + 
Sbjct: 172 MTRMPLVTAQEGVSRAETIRLFSQNRVEKLPLVDDAGRLTGLITIKDFDKA 222


>gi|222109888|ref|YP_002552152.1| RpiR family transcriptional regulator [Acidovorax ebreus TPSY]
 gi|221729332|gb|ACM32152.1| transcriptional regulator, RpiR family [Acidovorax ebreus TPSY]
          Length = 281

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/166 (18%), Positives = 54/166 (32%), Gaps = 6/166 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
             +++         +     A E I +      R+   G G SG +           G  
Sbjct: 99  NAVAAFLQYRSAASTNALERAAEAIASTWQTGRRIEFYGAGNSGIVAQDAQHKFFRLGIT 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S              ++   D  +++S SG + +L      AR+     IAIT+   S +
Sbjct: 159 SISTSDGHMQVMSATLLGPGDCAVIISNSGRTRDLMDAADIARKNGATTIAITASG-SPL 217

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A    I L          +  +P  S ++ L I D +A  +     
Sbjct: 218 AHTCRIHLAADHPEGYDRY--SPMVSRLLHLLIIDVVATCVALRIG 261


>gi|219850833|ref|YP_002465265.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
 gi|219545092|gb|ACL15542.1| CBS domain containing protein [Methanosphaerula palustris E1-9c]
          Length = 377

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 51/105 (48%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+++ +  +   +     VVD    + G+IT  D+ R    D + L V D+M + 
Sbjct: 268 VSPQTPVLEMLDQMYATKHLGFPVVDR-GIVVGMITLSDLHRASPIDRDALQVRDLMTRE 326

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +     +  A++++ + NI  + V+++ +  +G+V   D+++
Sbjct: 327 VVSLPPQAPVAEALRVMSERNIGRIPVLENTE-LVGLVTRTDIIK 370



 Score = 43.3 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L++  VM      +   T +   +  +         VVD     +G++   DL R 
Sbjct: 252 LQDLTLGAVMSTAVMTVSPQTPVLEMLDQMYATKHLGFPVVD-RGIVVGMITLSDLHRA 309



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               P+ +A+ ++SE+  G + V+ E  +L G++T  DI +   
Sbjct: 331 PPQAPVAEALRVMSERNIGRIPVL-ENTELVGLVTRTDIIKVMQ 373


>gi|189424959|ref|YP_001952136.1| inosine-5'-monophosphate dehydrogenase [Geobacter lovleyi SZ]
 gi|189421218|gb|ACD95616.1| inosine-5'-monophosphate dehydrogenase [Geobacter lovleyi SZ]
          Length = 488

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 67/197 (34%), Gaps = 15/197 (7%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
               +    D+ L          +   P  SA M        AIA+            ++
Sbjct: 19  PAHSLVLPRDVNLATRLSRNIPLN--IPLVSAAMDTVTESRAAIAMAREGGIG-----II 71

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           H    +         V  S   + +          + +A+ ++S  R   V +     KL
Sbjct: 72  HKNLSIEAQAHEVDKVKKSESGMIVDPITMRPTQKIREALEMMSRYRISGVPITKANGKL 131

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
            GI+T  D+   F  D   L +   M K N   +   T L  A + L+   +  L+VVDD
Sbjct: 132 VGILTNRDLR--FETD-YDLPISARMTKRNLVTVPVGTTLEQAKEHLKHTRVEKLLVVDD 188

Query: 323 CQKAIGIVHFLDLLRFG 339
            +   G++   D+ +  
Sbjct: 189 ARFLKGLITIKDIEKVK 205


>gi|89094624|ref|ZP_01167561.1| hypothetical protein MED92_00325 [Oceanospirillum sp. MED92]
 gi|89081094|gb|EAR60329.1| hypothetical protein MED92_00325 [Oceanospirillum sp. MED92]
          Length = 1217

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIK 291
           +   PL  A+ +++   F C+ V     K  G+ITE D+ R   K +++ SV   +VM  
Sbjct: 155 EANLPLSQAVDLMNTTHFSCI-VAMSEGKPVGVITERDVVRFAIKGVDSSSVAIQEVMSS 213

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +++L D  L  A + +    I  L+VVDD     GI+   D+ +
Sbjct: 214 PLQIVLPDMPLQTASRRMELEKIRRLIVVDDKGVLAGILTRHDIAK 259



 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V     L   +T++       +  VD   K  GI TE D  R     + ++ + + DVM 
Sbjct: 24  VGASAHLAHVLTLMQTNAISSIVAVDSDDKPIGIFTEQDAIRLMAEKRSISEMRMGDVMT 83

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V+  +     A Q + +H +  L+VVD+  K +G+    D L
Sbjct: 84  HPVLVVPLNLGYAKAYQKMMEHKVRHLVVVDEEGKLLGLASEGDFL 129



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 60/144 (41%), Gaps = 6/144 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   L    +  +       + H      +V +      A   + E +   + VVD
Sbjct: 58  FTEQDAIRLMAEKRSISEMRMGDVMTHPVL---VVPLNLGYAKAYQKMMEHKVRHLVVVD 114

Query: 259 EGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           E  KL G+ +EGD   +   +  +   +V   M ++   +  +  L+ A+ L+   + S 
Sbjct: 115 EEGKLLGLASEGDFLHHMGIEYLVELKTVGSAMSQSVATLEANLPLSQAVDLMNTTHFSC 174

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
            +V     K +G++   D++RF I
Sbjct: 175 -IVAMSEGKPVGVITERDVVRFAI 197



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 29/60 (48%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L ++ ++ ++  +   +     L   + L++ + IS ++ VD   K IGI    D +R 
Sbjct: 7   ELESIPLKAIITPDVMTVGASAHLAHVLTLMQTNAISSIVAVDSDDKPIGIFTEQDAIRL 66



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      +        + +V    PL  A   +  ++   + VVD+   L GI+T  DI 
Sbjct: 199 GVDSSSVAIQEVMSSPLQIVLPDMPLQTASRRMELEKIRRLIVVDDKGVLAGILTRHDIA 258

Query: 274 RNFH 277
           ++  
Sbjct: 259 KSLQ 262


>gi|326523955|dbj|BAJ96988.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 553

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      +  +M
Sbjct: 77  IPEGTTVYDASRRMAARRVDAVLLTDAQGLLSGIVTDKDISTRVIAEGLRVEQTIMSKIM 136

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 137 TRNPTYVSADSLAIEALQKMVQGKFRHLPVVENGE----VMAMLDIAK 180



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++  G  + ++    P+  A   + E R   V VV  G  ++GI T  D + R   ++
Sbjct: 234 STIVTEGTKVAIISPSDPVYVATQKMREFRVNSV-VVTTGNTVQGIFTSKDVLMRVVSQN 292

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+     VE VM  NP     DT +  A+ ++       + V+D   +    +  L L  
Sbjct: 293 LSPELTLVEKVMTANPDCATLDTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTH 352

Query: 338 FGI 340
             I
Sbjct: 353 AAI 355


>gi|73542360|ref|YP_296880.1| CBS:HPP [Ralstonia eutropha JMP134]
 gi|72119773|gb|AAZ62036.1| CBS:HPP [Ralstonia eutropha JMP134]
          Length = 379

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 7/137 (5%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                F            +  V    P  +A  +L+  R   + VVDE +KL GIIT+ D
Sbjct: 239 AYRRHFGNVLVSEIMSRDVVTVNPSQPASEASHLLTRHRIKALPVVDEHRKLLGIITQSD 298

Query: 272 IF---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            F   R+        +V D+M +       D  +    Q      +    V+DD  + +G
Sbjct: 299 FFAAQRDTGARRLAGTVRDLMTRAVVTARADQPMVELAQAFSDGGLHHAPVIDDHHRVVG 358

Query: 329 IVHFLD----LLRFGII 341
           +V   D    LL+ G++
Sbjct: 359 MVTQSDLVAALLKDGVM 375



 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 36/80 (45%), Gaps = 1/80 (1%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E   L+ I+    + R + +    + V ++M ++   +      + A  LL +H I  L 
Sbjct: 224 EEDDLEAILVAAQL-RAYRRHFGNVLVSEIMSRDVVTVNPSQPASEASHLLTRHRIKALP 282

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD+ +K +GI+   D    
Sbjct: 283 VVDEHRKLLGIITQSDFFAA 302


>gi|302550675|ref|ZP_07303017.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302468293|gb|EFL31386.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 154

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/134 (23%), Positives = 58/134 (43%), Gaps = 6/134 (4%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P G    L   A D+MH       +     L  A  ++ E   G + + DE ++L GI
Sbjct: 3   RRPSGTGRYLMTTAGDIMH--RGAQWIPAHETLDRAAQLMRELNVGALPISDENERLCGI 60

Query: 267 ITEGDIF---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+ DI         D   ++  ++    P+ I  +  +   ++ +R+H I  L V+   
Sbjct: 61  LTDRDIVVGCVAMGHDPARVTAGEMAKGTPRWIDANAEVGEVLREMREHQIRRLPVI-QD 119

Query: 324 QKAIGIVHFLDLLR 337
           ++ +G++   DL R
Sbjct: 120 KRLVGMISEADLAR 133



 Score = 39.5 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 9/61 (14%), Positives = 27/61 (44%), Gaps = 1/61 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +    +  +   +     + + +  + E +   + V+ + ++L G+I+E D+ R+   
Sbjct: 79  RVTAGEMAKGTPRWIDANAEVGEVLREMREHQIRRLPVI-QDKRLVGMISEADLARHLAD 137

Query: 279 D 279
           D
Sbjct: 138 D 138


>gi|294102166|ref|YP_003554024.1| CBS domain containing protein [Aminobacterium colombiense DSM
           12261]
 gi|293617146|gb|ADE57300.1| CBS domain containing protein [Aminobacterium colombiense DSM
           12261]
          Length = 877

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 57/152 (37%), Gaps = 5/152 (3%)

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
            A ++ L   R  S              ++             +  V+    + DA   +
Sbjct: 278 QAASVTLHNVRPLS---ILESLEKKLEESIQPRIKVEDIMTSPVMAVEPDSSVNDAYRTM 334

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
                  + VV  G+K+KGIIT  D+ +          V + M +    + ++  +  A 
Sbjct: 335 IRYGHSALPVV-YGEKVKGIITRKDLDKAQLHGFGLALVREFMTEGVISVSKEASIAEAH 393

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++L  HNI  L V+D     +GIV   DL+R 
Sbjct: 394 RILVFHNIGRLPVLD-GHVLVGIVTRTDLIRA 424



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +A  IL     G + V+D G  L GI+T  D+ R  
Sbjct: 383 VSKEASIAEAHRILVFHNIGRLPVLD-GHVLVGIVTRTDLIRAL 425


>gi|254672249|emb|CBA05245.1| putative regulatory protein [Neisseria meningitidis alpha275]
          Length = 282

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              + +    +  A  S++ E+R L             +   A+  +   + RV   G+G
Sbjct: 88  DDMASVVEKVLGNAAASLLGERRFLKE----------SELENAIATLMHAR-RVEFYGVG 136

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG +           G  +              +++  D+++ +S +GSS EL   +  
Sbjct: 137 NSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSI 196

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +IA+T    S +A  AD VL      +       P  S ++QLA+ D LAI L
Sbjct: 197 AKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAVIDILAIGL 253

Query: 194 LESRN 198
                
Sbjct: 254 ALRLG 258


>gi|165976008|ref|YP_001651601.1| inosine 5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|165876109|gb|ABY69157.1| inosine-5'-monophosphate dehydrogenase [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
          Length = 487

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD    L GIIT  D    F +DL T +V  VM 
Sbjct: 98  VTVSPDLTLAELAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVRDL-TKTVAKVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +    + E       ++L+ QH +  +++VDD  K  G++   D  + 
Sbjct: 155 LKERLVTVKESANREEILELMHQHRVEKVLMVDDNFKLKGMITVKDFQKA 204


>gi|296082621|emb|CBI21626.3| unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   ++L      V  +M
Sbjct: 81  IPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIM 140

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +  D+L   A++ + Q     L VV++ +    ++  LD+ +
Sbjct: 141 TRHPIFVNSDSLAIEALEKMVQGKFRHLPVVENGE----VIAILDITK 184



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +V    P+  A   + E R   V ++  G K++GI+T  D + R   ++
Sbjct: 238 STIIAENTKVAIVSPSDPISVAAKKMREYRVNSVIIM-TGSKIQGILTSKDILMRVVAQN 296

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L+     VE VM  NP+    +T +  A+ ++       L VVD   
Sbjct: 297 LSPELTLVEKVMTPNPECATLETTILDALHIMHDGKFLHLPVVDKDG 343


>gi|238024821|ref|YP_002909053.1| putative signal-transduction protein with CBS domains [Burkholderia
           glumae BGR1]
 gi|237879486|gb|ACR31818.1| Putative signal-transduction protein with CBS domains [Burkholderia
           glumae BGR1]
          Length = 154

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLS 284
            ++  +     + DA+ +++ K  G + VV EG  + GI+TE D  R      +      
Sbjct: 17  RTVYTIGKDESVYDALKLMAIKSVGAL-VVTEGNDIVGIVTERDYARKVVLLERSSKATR 75

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E++M    + +         M L+ +H +  L V+D   K +G++   DL++
Sbjct: 76  IEEIMTMKVRYVEPSQTSDQCMALMTEHRVRHLPVLD-GGKLVGVISIGDLVK 127



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+        + +++E R   + V+D 
Sbjct: 56  TERDYA--RKVVLLERSSKATRIEEIMTMKVRYVEPSQTSDQCMALMTEHRVRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLVGVISIGDLVKSVIAD 132


>gi|73669912|ref|YP_305927.1| homoserine O-acetyltransferase [Methanosarcina barkeri str. Fusaro]
 gi|72397074|gb|AAZ71347.1| homoserine O-acetyltransferase [Methanosarcina barkeri str. Fusaro]
          Length = 579

 Score = 85.0 bits (209), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/158 (20%), Positives = 69/158 (43%), Gaps = 5/158 (3%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS---IPLV 233
           +  I+     + +     E R+   +D ++L  G     +    S ++ S         V
Sbjct: 412 SQEIVSALTANGVDAKYEEIRSQYGHDAFLLEEGQLNYLIRGFLSQILVSDIMYRNFYSV 471

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + +A T++ +K+   + VV E  KL+GI+T  DI +     +  L  ++++ ++ 
Sbjct: 472 SRNETIENASTLMVKKKVNHLPVVSEDGKLEGIVTSWDITKAVACKITEL--DEIITRDV 529

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           K +     +  A  ++   +IS L V+D   + IG+V 
Sbjct: 530 KYVFSGDKIETASSIMEDFSISALPVIDSENRVIGMVT 567



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/70 (24%), Positives = 32/70 (45%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           EG +       L+ + V D+M +N   +  +  +  A  L+ +  ++ L VV +  K  G
Sbjct: 444 EGQLNYLIRGFLSQILVSDIMYRNFYSVSRNETIENASTLMVKKKVNHLPVVSEDGKLEG 503

Query: 329 IVHFLDLLRF 338
           IV   D+ + 
Sbjct: 504 IVTSWDITKA 513


>gi|147920105|ref|YP_686135.1| homoserine O-acetyltransferase [uncultured methanogenic archaeon
           RC-I]
 gi|110621531|emb|CAJ36809.1| homoserine O-acetyltransferase [uncultured methanogenic archaeon
           RC-I]
          Length = 505

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 68/174 (39%), Gaps = 6/174 (3%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L +    +         +  I+     +   ++  E ++   +D ++L  G     +   
Sbjct: 318 LVISVSSDWLY--PPYQSKEIVMALTANNAEVSYCEIKSMYGHDAFLLEAGQMNYLISNF 375

Query: 220 AS--DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            S   V         ++    +  A  IL +++   + VV    KL GI+T  D+ R   
Sbjct: 376 LSPRLVRDVMAPAATIREVASIDLAARILVDRKVTHLPVVSGSGKLTGIVTAWDVARAVV 435

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   TL  + +M      I  D  L  A + L +++IS L VVD  +  +GIV 
Sbjct: 436 ERCETL--DQIMTSRVVTIEADATLEAAARKLEKYDISALPVVDKDKNVLGIVT 487



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM      I E   + +A ++L    ++ L VV    K  GIV   D+ R 
Sbjct: 381 VRDVMAPA-ATIREVASIDLAARILVDRKVTHLPVVSGSGKLTGIVTAWDVARA 433


>gi|325958736|ref|YP_004290202.1| inosine-5'-monophosphate dehydrogenase [Methanobacterium sp. AL-21]
 gi|325330168|gb|ADZ09230.1| inosine-5'-monophosphate dehydrogenase [Methanobacterium sp. AL-21]
          Length = 495

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL +          V+H    +         V  SGD    
Sbjct: 45  NIPIVSSAMDTVTEGEMAIALAQEGGLG-----VIHRNMTINEQINEIKKVKRSGDLTIR 99

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +++A  I+ E+    + VV     + GII+  D+    + D     V+D+
Sbjct: 100 DVITISPEASIVEAQEIMDEEEISGLPVV-RDGTVVGIISRRDVKPIINSD-PKRMVQDI 157

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +    + E T    A+ +  ++ +  L VV      +GI+   D+L
Sbjct: 158 MTEEVVTVSESTTPAEALDIAYENKVERLPVV-KDGIIVGILTMRDIL 204


>gi|229019835|ref|ZP_04176636.1| hypothetical protein bcere0030_43350 [Bacillus cereus AH1273]
 gi|229026061|ref|ZP_04182443.1| hypothetical protein bcere0029_43450 [Bacillus cereus AH1272]
 gi|228735239|gb|EEL85852.1| hypothetical protein bcere0029_43450 [Bacillus cereus AH1272]
 gi|228741442|gb|EEL91641.1| hypothetical protein bcere0030_43350 [Bacillus cereus AH1273]
          Length = 437

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPNDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D        +    ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVVKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|300115024|ref|YP_003761599.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus watsonii
           C-113]
 gi|299540961|gb|ADJ29278.1| inosine-5'-monophosphate dehydrogenase [Nitrosococcus watsonii
           C-113]
          Length = 486

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI+L +          ++H    +    V    V         
Sbjct: 40  NIPLVSAAMDTVTEAQLAISLAQEGGIG-----IIHKNMSVERQAVEVRKVKKFESGVIK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + +        V VV EG++L GI+T  D+     +      V  +
Sbjct: 95  EPITVAPDTSIGEVLALTRAHSISGVPVV-EGKQLVGIVTSRDLRF---ETRFDSPVSAI 150

Query: 289 MIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M   P    + E       + LL Q+ I  ++VVDD  K  G++   D+ +  
Sbjct: 151 MTPQPRLITVPEGAERDEVVDLLHQYRIEKVLVVDDQFKLRGLITVKDIQKSK 203


>gi|228951315|ref|ZP_04113425.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228808368|gb|EEM54877.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 287

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|261400287|ref|ZP_05986412.1| transcriptional regulator HexR [Neisseria lactamica ATCC 23970]
 gi|313668241|ref|YP_004048525.1| transcriptional regulator [Neisseria lactamica ST-640]
 gi|269210097|gb|EEZ76552.1| transcriptional regulator HexR [Neisseria lactamica ATCC 23970]
 gi|309380015|emb|CBX21426.1| unnamed protein product [Neisseria lactamica Y92-1009]
 gi|313005703|emb|CBN87157.1| putative transcriptional regulator [Neisseria lactamica 020-06]
          Length = 282

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G SG +           G  +              ++T  D+++ +S +GSS 
Sbjct: 129 RVEFYGVGNSGIVAQDAQHKFFRFGISTVAYVDTHTQLMAASVLTGRDVLVAISNTGSSI 188

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   +  A+     +IA+T    S +A  AD VL      +       P  S ++QLA+
Sbjct: 189 ELLDAVSIAKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAV 245

Query: 186 GDALAIALLESRN 198
            D LAI L     
Sbjct: 246 IDILAIGLALRLG 258


>gi|149375574|ref|ZP_01893344.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
           algicola DG893]
 gi|149360279|gb|EDM48733.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Marinobacter
           algicola DG893]
          Length = 624

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-- 262
            +         +    + ++       +      L +A  I++E+    + ++DE  K  
Sbjct: 137 ALSRREKSNQPMTARVTRLI--SREPVMAPNTVRLQEAARIMTERGVSALLLMDESGKQP 194

Query: 263 -LKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            L GIIT+ D+  R   + L +   + D+M +       +  +  AM  +  +N+  L V
Sbjct: 195 RLSGIITDRDLRTRALCEALPSETPISDIMTEELITTRSNAFIFEAMLTMLHNNVHHLPV 254

Query: 320 VDDCQKAIGIVHFLDLLR 337
           + +  K  G++   D+++
Sbjct: 255 M-EGDKVRGVIALSDIVK 271


>gi|121604315|ref|YP_981644.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
 gi|120593284|gb|ABM36723.1| putative signal-transduction protein with CBS domains [Polaromonas
           naphthalenivorans CJ2]
          Length = 146

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVE 286
           +  ++    + DA+  +++K  G + V+ EG  + GI+TE D  R      +      V 
Sbjct: 16  VHTIRPDDSVFDALKCMADKGIGALLVM-EGDAIVGIVTERDYARKIALKGRTSALTQVR 74

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DVM  +   +         M L+  + +  L VV    + +G++   DL++
Sbjct: 75  DVMTTSVMFVQPTQTSEECMALMTDNRLRHLPVV-QDNRLVGLISIGDLVK 124



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      DVM +      V+      + + ++++ R   + VV +
Sbjct: 53  TERDYARKIALKGRTSALTQVRDVMTTSVMF--VQPTQTSEECMALMTDNRLRHLPVV-Q 109

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+I+ GD+ ++ 
Sbjct: 110 DNRLVGLISIGDLVKDI 126


>gi|238895962|ref|YP_002920698.1| inosine 5'-monophosphate dehydrogenase [Klebsiella pneumoniae
           NTUH-K2044]
 gi|290508300|ref|ZP_06547671.1| inosine-5'-monophosphate dehydrogenase [Klebsiella sp. 1_1_55]
 gi|238548280|dbj|BAH64631.1| inositol-5-monophosphate dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae NTUH-K2044]
 gi|289777694|gb|EFD85691.1| inosine-5'-monophosphate dehydrogenase [Klebsiella sp. 1_1_55]
          Length = 510

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 14  LSTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 73

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 74  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 130

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 131 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 187

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V    + +  +   +VVD+     G++   D  + 
Sbjct: 188 ESREVVFAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 226


>gi|228906571|ref|ZP_04070447.1| Transcriptional regulator, RpiR [Bacillus thuringiensis IBL 200]
 gi|228853120|gb|EEM97898.1| Transcriptional regulator, RpiR [Bacillus thuringiensis IBL 200]
          Length = 287

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|149907459|ref|ZP_01896206.1| mannose-1-phosphate guanyltransferase [Moritella sp. PE36]
 gi|149809129|gb|EDM69058.1| mannose-1-phosphate guanyltransferase [Moritella sp. PE36]
          Length = 352

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 54/108 (50%), Gaps = 2/108 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
               +K    + DA+ I++++      VVD+ + L+GI+T+GDI R    +L  T  + +
Sbjct: 6   KNVFIKSTSTVWDALEIINQEALRVALVVDDKECLQGIVTDGDIRRGLLSNLALTADITE 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VM  NP     +T     ++L+ +  I  + ++D+  K +G+     L
Sbjct: 66  VMNTNPITADVNTPREDLIELMERTEILSIPLLDN-GKVVGLETLHHL 112


>gi|34495603|ref|NP_899818.1| transcriptional regulator [Chromobacterium violaceum ATCC 12472]
 gi|34101458|gb|AAQ57827.1| probable transcriptional regulator [Chromobacterium violaceum ATCC
           12472]
          Length = 282

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 60/161 (37%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S+L              AV  +     R+   G+G SG I +         G P+    
Sbjct: 101 VSALLKCRNDVNPQAIEAAVRLLTDA-NRIEFYGLGNSGIIAADAQHKFFRFGIPTVAYS 159

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++  DD+++ +S SG + EL   +  A      +IA+T+   S +A  A 
Sbjct: 160 DTHIQMMAASVLGPDDVLVAISSSGRTMELLDAVDVALASGAKVIALTTSG-SPLARRAT 218

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L    +        +P  S I+ L   D L +++   R 
Sbjct: 219 VSLIA--DTLEDNETYSPMISRIVHLVQIDILTVSVALRRG 257


>gi|203288800|ref|YP_002223749.1| inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
 gi|201084351|gb|ACH93938.1| inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
          Length = 483

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/201 (18%), Positives = 77/201 (38%), Gaps = 16/201 (7%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S+V   + I+   + L        +   P  S+ M       +AIA+ +    
Sbjct: 9   ALTFDDVSLVPRKSSILPSDVNLKTRLTRNIYLNIPFLSSAMDTVTESRMAIAVAKEGGI 68

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITILSEKRFGCV 254
                 V+H    +         V     +  +     +     + +A  ++ +     +
Sbjct: 69  G-----VIHKNITIEKQRKEVEIVKSYHRNGIIRNLITINEDTSIKEARRLIVKHNISAL 123

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            V D   K+ G++T  DI      ++    V + M K      ED  L+ A ++L +H I
Sbjct: 124 PVTDHAGKILGLVTSRDIKYIADDNI---PVINAMTKKLITAKEDITLSEAKEILFKHKI 180

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             L++VD+     G++   D+
Sbjct: 181 EKLLIVDESNSLRGLITCKDI 201


>gi|237654401|ref|YP_002890715.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237625648|gb|ACR02338.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 144

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           V    P+ + +  ++  +     V  E   L GI TE D          D +T  V  VM
Sbjct: 18  VSADTPVREVVRQMNALQRSAALVT-EHGVLTGIFTERDAAFGVLAAGLDADTTPVGAVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             NP  + ED     A+ L+ ++ +  + +VD  ++ +G+V   D L+ 
Sbjct: 77  THNPVTLTEDRPFGHALHLMYENGVRHVPIVDANRRPLGVVTARDALQL 125


>gi|257387824|ref|YP_003177597.1| hypothetical protein Hmuk_1776 [Halomicrobium mukohataei DSM 12286]
 gi|257170131|gb|ACV47890.1| CBS domain containing membrane protein [Halomicrobium mukohataei
           DSM 12286]
          Length = 381

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 1/128 (0%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               + +     +       S P V+    + +   +L E       V  EG  L G++T
Sbjct: 49  QKQLVQSHVEDNAKAGAMMRSAPKVERHDDVREVARVLVEGGAKIAPVF-EGGSLWGVVT 107

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     ++L+ L+VE +  K+   I E+T +  A+ LLR+H+IS + V+DD     G
Sbjct: 108 GDDILEAVLENLDALTVEQIYTKDVVTITEETHVGQAINLLRKHSISRIPVLDDDGDLSG 167

Query: 329 IVHFLDLL 336
           +V   D++
Sbjct: 168 MVTTHDIV 175



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----------- 281
           +     +  AI +L +     + V+D+   L G++T  DI     +D+N           
Sbjct: 135 ITEETHVGQAINLLRKHSISRIPVLDDDGDLSGMVTTHDIVDVVVRDMNKATRGDRSGEN 194

Query: 282 ----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAI-GIVHFLDL 335
                L V D+M         D  +  A++ + +++ + L+V  D     + GIV   D+
Sbjct: 195 DRVLDLPVYDIMNSPVATTSLDGSVRDAVERMLENDFAGLVVTPDHDDSLVAGIVTKTDV 254

Query: 336 LRF 338
           LR 
Sbjct: 255 LRA 257


>gi|225180870|ref|ZP_03734318.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225168351|gb|EEG77154.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 207

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    + DA+ ++ EK    V V+D  + L G+++  D+    H       V+D+M ++
Sbjct: 14  VEPHTTVPDALKLMQEKDIRHVPVLD-NEHLVGMVSLLDVVGAAHT--QATKVKDIMSED 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +  DT L  A  +++++ I  L V+    + IG++   DL +  +I
Sbjct: 71  VITVEADTPLDEAAAVMQKNKIGGLPVI-QDGELIGMITETDLFKAMLI 118



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++ M K+   +   T +  A++L+++ +I  + V+D+    +G+V  LD++  
Sbjct: 3   IKESMNKDVINVEPHTTVPDALKLMQEKDIRHVPVLDNE-HLVGMVSLLDVVGA 55



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G   T      D+M   + +  V+   PL +A  ++ + + G + V+ +  +L G+ITE
Sbjct: 53  VGAAHTQATKVKDIM--SEDVITVEADTPLDEAAAVMQKNKIGGLPVI-QDGELIGMITE 109

Query: 270 GDIFRNF 276
            D+F+  
Sbjct: 110 TDLFKAM 116


>gi|241767956|ref|ZP_04765497.1| putative signal transduction protein with CBS domains [Acidovorax
           delafieldii 2AN]
 gi|241360854|gb|EER57698.1| putative signal transduction protein with CBS domains [Acidovorax
           delafieldii 2AN]
          Length = 146

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
              +++  +     + DA+  +++K  G + V+ EG  + GI+TE D  R      +  +
Sbjct: 11  KRDNTVHRIGPDDSVFDALQRMADKGIGALLVM-EGDAIVGIVTERDYARKIALLGRKSS 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V DVM  +   +         M L+ ++ +  L VV +  K +G++   DL++
Sbjct: 70  ATLVRDVMTADVMYVQPAQTSEECMALMTENRLRHLPVV-EGGKLVGLISIGDLVK 124



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 17/77 (22%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        LG               +  V+      + + +++E R   + VV E
Sbjct: 53  TERDYA--RKIALLGRKSSATLVRDVMTADVMYVQPAQTSEECMALMTENRLRHLPVV-E 109

Query: 260 GQKLKGIITEGDIFRNF 276
           G KL G+I+ GD+ ++ 
Sbjct: 110 GGKLVGLISIGDLVKDI 126


>gi|29832805|ref|NP_827439.1| hypothetical protein SAV_6263 [Streptomyces avermitilis MA-4680]
 gi|29609926|dbj|BAC73974.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 157

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 57/136 (41%), Gaps = 6/136 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
               P G        A ++MH       +     L  A  ++ E   G + + DE ++L 
Sbjct: 4   APRRPSGTGRYFMTTAGEIMH--RGAQWIPAHETLDRAAQLMRELNVGALPISDENERLC 61

Query: 265 GIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           GI+T+ DI        +D   ++  ++    P+ I     +T  +  ++ H I  L V+ 
Sbjct: 62  GILTDRDIVVGCVAMGRDPARVTAGEMAQGTPRWIDASADVTEVLDEMQGHQIRRLPVI- 120

Query: 322 DCQKAIGIVHFLDLLR 337
           + ++ +G++   DL +
Sbjct: 121 EDKRLVGMISEADLAQ 136



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/77 (15%), Positives = 32/77 (41%), Gaps = 1/77 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G      +    +  +   +     + + +  +   +   + V+ E ++L G+I+E D
Sbjct: 75  AMGRDPARVTAGEMAQGTPRWIDASADVTEVLDEMQGHQIRRLPVI-EDKRLVGMISEAD 133

Query: 272 IFRNFHKDLNTLSVEDV 288
           + ++   D   + VE V
Sbjct: 134 LAQHLTDDQIAVWVESV 150


>gi|55378301|ref|YP_136151.1| hypothetical protein rrnAC1525 [Haloarcula marismortui ATCC 43049]
 gi|55231026|gb|AAV46445.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 380

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 57/128 (44%), Gaps = 1/128 (0%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               + +     +       S P V+    + +   +L E       V  E  +L GI+T
Sbjct: 49  QKQLVQSHVEDNAKAGAMTRSAPKVERTDDVREVARVLVEGGVKLAPVF-EAGELWGIVT 107

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           E DI      +L+ LSVED+  ++   + EDT +   + LLR+H IS L V+ D     G
Sbjct: 108 EDDILDAVLDNLDALSVEDIYTRDVITVSEDTNVGQVVNLLRKHGISRLPVLGDDDGLTG 167

Query: 329 IVHFLDLL 336
           +V   D++
Sbjct: 168 MVTRHDIV 175



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           V     +   + +L +     + V+ +   L G++T  DI     +D+N  +        
Sbjct: 135 VSEDTNVGQVVNLLRKHGISRLPVLGDDDGLTGMVTRHDIVDVVVRDMNKTTRGDRSGEI 194

Query: 285 -------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDL 335
                  V DVM    +       +  A+  + +++ + L+V   DD     GI+   D+
Sbjct: 195 ERVLDMPVYDVMSSPVETAKLGDSVEDAVARMLENDFAGLVVTPEDDDTHVAGILTKTDV 254

Query: 336 LRF 338
           LR 
Sbjct: 255 LRA 257


>gi|260773956|ref|ZP_05882871.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
 gi|260610917|gb|EEX36121.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
          Length = 623

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 56/131 (42%), Gaps = 5/131 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS--EKRFGCVAVVDEGQK 262
            V H   +             + D+I +      +      +   E RF   AV+    +
Sbjct: 141 AVEHTCREEEKGLFFRRVSEIASDNITIADENLSIHQVAQAMCGEEGRFSSCAVITRQDE 200

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GI+T+ D+ RN        T  +  VM KNP++I  D  +  A+ ++ Q+NI  L VV
Sbjct: 201 IVGIVTDRDMTRNVVAAAVNITQPIRHVMTKNPQLIHADDKVIQAISIMLQYNIRCLPVV 260

Query: 321 DDCQKAIGIVH 331
            +  + +G++ 
Sbjct: 261 -NGNQVVGLLT 270


>gi|15603442|ref|NP_246516.1| hypothetical protein PM1577 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12721971|gb|AAK03661.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 286

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 71/181 (39%), Gaps = 5/181 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+     +      +  EK+   +L+ SL           VE++   K R+ + GIG S 
Sbjct: 90  SITDKDDLSEIAEKLFVEKQ--QALKESLSLNAIPYVARVVEQLMQAK-RIQLMGIGNSA 146

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +       L   G P        AS      +T  D++ ++S+SG   E+      A+ 
Sbjct: 147 LVAKDFFYKLTKIGLPVVTETDTHASLAMSQSLTPQDILFLISFSGRHREILLAAENAKA 206

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             I +IA+T+   + +   AD +L      +      +   S   Q AI D L + +L+ 
Sbjct: 207 RQIKIIALTALTTNPLHELADYLL--YSVADESTFRSSSIASRTAQHAITDLLFMGILQQ 264

Query: 197 R 197
           +
Sbjct: 265 K 265


>gi|257052583|ref|YP_003130416.1| peptidase M50 [Halorhabdus utahensis DSM 12940]
 gi|256691346|gb|ACV11683.1| peptidase M50 [Halorhabdus utahensis DSM 12940]
          Length = 412

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 2/119 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             DVM   D +  V     + + + ++  +R     VVD   ++ G++T  D       +
Sbjct: 255 VRDVMTPADRVQTVDPDLSVAELMELMFRERHTGFPVVD-SGRVLGLVTLEDARAVREVE 313

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 E+VM  + + I  D     A+  +++HNI  L+V++D +  +G++   DL+  
Sbjct: 314 REAFRTEEVMTTDLRTIHPDENAMTALTRMQEHNIGRLIVMEDDE-FVGLLTRSDLMTA 371



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  +SV DVM      + +  D  +   M+L+ +   +   VVD   + +G+V   
Sbjct: 246 MKAAFEGVSVRDVMTPADRVQTVDPDLSVAELMELMFRERHTGFPVVD-SGRVLGLVTLE 304

Query: 334 D 334
           D
Sbjct: 305 D 305


>gi|227824485|ref|ZP_03989317.1| acetoin utilization protein acuB [Acidaminococcus sp. D21]
 gi|226904984|gb|EEH90902.1| acetoin utilization protein acuB [Acidaminococcus sp. D21]
          Length = 222

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 12/118 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           ++    L++   ++       + V D+   L GI+T+GD+ R    D            L
Sbjct: 14  IRSDQSLLEVRELMLSNNLRRIPVTDKEGLLMGIVTDGDVSRATPSDASVLDRYEANYLL 73

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L V D+M K+   + E   +  A  LL  H +  L VVD      GI+   D+ + 
Sbjct: 74  GKLKVSDIMTKSVWTVRESDSVETAAYLLYTHKVGALPVVDGTNHITGIISDTDIFKA 131



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++++M      I  D  L    +L+  +N+  + V D     +GIV   D+ R 
Sbjct: 1   MRIKEIMTPTVISIRSDQSLLEVRELMLSNNLRRIPVTDKEGLLMGIVTDGDVSRA 56



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V+    +  A  +L   + G + VVD    + GII++ DIF+ F
Sbjct: 89  VRESDSVETAAYLLYTHKVGALPVVDGTNHITGIISDTDIFKAF 132


>gi|34499485|ref|NP_903700.1| sugar-phosphate nucleotide transferase [Chromobacterium violaceum
           ATCC 12472]
 gi|34105335|gb|AAQ61690.1| probable sugar-phosphate nucleotide transferase [Chromobacterium
           violaceum ATCC 12472]
          Length = 348

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVE 286
              L+    P   A+ +L +     V VVDE ++L G +T+GD+ R   +  +  T +V 
Sbjct: 6   EKVLLSPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRALLRHVNFMTAAVA 65

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D+M + P+V L          L+ QH++  + ++D   + +G+  + ++L+
Sbjct: 66  DIMHREPRVALASASREQLRHLMEQHSLLHIPLLDHDDRVVGLETYQEVLQ 116



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%)

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             DT    A+++L    + +++VVD+ ++ +G +   D+ R 
Sbjct: 11  SPDTPAESALRVLDDSGLRLVLVVDEQRRLLGTLTDGDVRRA 52


>gi|262375222|ref|ZP_06068455.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
 gi|262309476|gb|EEY90606.1| CBS domain-containing protein [Acinetobacter lwoffii SH145]
          Length = 143

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
               +I  ++    +++AIT++++K  G + V  E   + GI++E D  R      +   
Sbjct: 11  KMHQAIYTIRPDSTVLEAITLMADKGIGALVVTHEDN-VVGILSERDYTRKIALMQRTSF 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +V ++M      +   T +   + L+ + ++  L VV+   K IG++   DL++ 
Sbjct: 70  DTTVNEIMTSKVITVNTATSVEDCLSLMTERHLRHLPVVEHE-KLIGLISIGDLVKA 125



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 30/76 (39%), Gaps = 1/76 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                +       +        +  V     + D +++++E+    + VV E +KL G+I
Sbjct: 59  RKIALMQRTSFDTTVNEIMTSKVITVNTATSVEDCLSLMTERHLRHLPVV-EHEKLIGLI 117

Query: 268 TEGDIFRNFHKDLNTL 283
           + GD+ +    D   L
Sbjct: 118 SIGDLVKAAMDDQRKL 133


>gi|254417696|ref|ZP_05031421.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
 gi|196175508|gb|EDX70547.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
          Length = 336

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--------TLSV 285
            +   L DA+ ++S        VVDE   L GII++ D+ +      N        T  +
Sbjct: 35  SLHMTLDDALQMVSRSTHQGFPVVDE-GTLVGIISQSDLTQATKMQGNPPRCPFPGTTPL 93

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++M  +P  +     L   + LL ++++S L V  + +K +GI+   D++R 
Sbjct: 94  AEIMTSHPITVKPTASLVDVLYLLNRYHLSRLPVT-EGRKLLGIITRSDIIRA 145



 Score = 43.0 bits (100), Expect = 0.061,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                  VK    L+D + +L+      + V  EG+KL GIIT  DI R     L++ +
Sbjct: 97  MTSHPITVKPTASLVDVLYLLNRYHLSRLPVT-EGRKLLGIITRSDIIRAELDQLDSKT 154



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ ED+M +  + +     L  A+Q++ +       VVD+    +GI+   DL + 
Sbjct: 21  LTAEDLMQRQVETLSLHMTLDDALQMVSRSTHQGFPVVDE-GTLVGIISQSDLTQA 75


>gi|150391881|ref|YP_001321930.1| RpiR family transcriptional regulator [Alkaliphilus metalliredigens
           QYMF]
 gi|149951743|gb|ABR50271.1| transcriptional regulator, RpiR family [Alkaliphilus
           metalliredigens QYMF]
          Length = 283

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++E +     S +   A+E I   K  + I G+G S  +             P+    
Sbjct: 107 IQAIEDTKNILSSEELEKAIETIDKAKS-INIFGLGASSVVALDAQYKFMRINIPTHMYF 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T++D+ I +S+SG + E+   +  A++     IAIT    S +A  AD
Sbjct: 166 DSHIQMTSAVHLTKEDVAIGISYSGRTKEIVEAMKVAKKKGAKTIAITQFGDSPLAGSAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           I L       +   G     S I QL + D+L I +   R
Sbjct: 226 IKLYTAAVENNFRSGA--MASRIAQLTVIDSLFIGVACRR 263


>gi|302385427|ref|YP_003821249.1| inosine-5'-monophosphate dehydrogenase [Clostridium saccharolyticum
           WM1]
 gi|302196055|gb|ADL03626.1| inosine-5'-monophosphate dehydrogenase [Clostridium saccharolyticum
           WM1]
          Length = 484

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V V  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMGKFRISGVPVT-EGKKLVGIITNRDLK--FEEDFSR-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   L  A ++L +  +  L +VDD     G++   D+
Sbjct: 152 MTSENLVTAREGITLMEAKKILAKARVEKLPIVDDDFNLKGLITIKDI 199


>gi|18312938|ref|NP_559605.1| hypothetical protein PAE1873 [Pyrobaculum aerophilum str. IM2]
 gi|18160433|gb|AAL63787.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 142

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 64/115 (55%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFHKDLN-TL 283
           +  ++  +K G  ++DA  +++++  G + V  D  + L G+I+E DI R     +  + 
Sbjct: 7   ASKNVICIKPGASILDAAKLMAQRNIGFLIVSSDCKRDLAGVISERDIIRAIASGIQPSE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+++M +    + +DT +    +L+R++NI  ++V+D+  +  G++   DLL+ 
Sbjct: 67  PVDNIMTRKVVYVYKDTPVWEIARLMRKYNIRHILVMDN-GQIFGVISIRDLLKE 120



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRF 338
              +  KN   I     +  A +L+ Q NI  L+V  DC++   G++   D++R 
Sbjct: 3   AGAIASKNVICIKPGASILDAAKLMAQRNIGFLIVSSDCKRDLAGVISERDIIRA 57


>gi|242055437|ref|XP_002456864.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
 gi|241928839|gb|EES01984.1| hypothetical protein SORBIDRAFT_03g044210 [Sorghum bicolor]
          Length = 547

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     + +A   ++ +R   V + D    L GI+T+ DI  R   +++      V  VM
Sbjct: 69  IPDHTTVHEACRRMASRRVDAVLLTDSNALLCGILTDKDITTRVIAREMKMEETPVSKVM 128

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +NP  +  DTL   A+Q + Q     L VV +  + I I+  
Sbjct: 129 TRNPVFVHADTLAVEALQKMVQGKFRHLPVV-EHGEVIAILDI 170



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/123 (21%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +    AVV    K  GI+T  D + R   ++
Sbjct: 226 STIISENPKVVTVAPSDTVLTASKKMLELKV-SSAVVAIENKPGGILTSRDILMRVIAQN 284

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   + +VE VM ++P+    D  +  A+  +       L V+D     + +V  L +  
Sbjct: 285 LPPESTTVEKVMTQSPECATVDMPILDALHTMHDGKFLHLPVLDRDGNVVTVVDVLHITH 344

Query: 338 FGI 340
             I
Sbjct: 345 AAI 347


>gi|118594657|ref|ZP_01552004.1| IMP dehydrogenase [Methylophilales bacterium HTCC2181]
 gi|118440435|gb|EAV47062.1| IMP dehydrogenase [Methylophilales bacterium HTCC2181]
          Length = 486

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL E          V+H            S V        +
Sbjct: 40  NIPLVSAAMDTVTESNLAIALAEEGGLG-----VIHKNMTPERQAEHVSKVKRFESGVVN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I  + +   + V+ E  K+ GI+T  D+   F ++L T  V++V
Sbjct: 95  DPITVSPDMTVDEVIQITKKHKISGLPVI-ESGKIVGIVTNRDLR--FEENL-TQPVKNV 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E       M+LL QH +  L+V+D   K  G++   D+ +
Sbjct: 151 MTPRERLVTVPEGAGKDEIMRLLHQHRLERLLVIDKNDKLKGLITVKDIQK 201


>gi|71279770|ref|YP_271593.1| CBS domain-containing protein [Colwellia psychrerythraea 34H]
 gi|71145510|gb|AAZ25983.1| CBS domain protein [Colwellia psychrerythraea 34H]
          Length = 624

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMI 290
           +     +  A   ++E+ + C+ VV E     GI+T+ DI R    +  + S  +  +M 
Sbjct: 176 ISAEQTIQQAAVQMTEQGYSCL-VVLENDNPVGIVTDKDIRRRCVAEGLSTSEVISAIMT 234

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++   I        A+ ++   +I  L V       +G+V   DL+
Sbjct: 235 RDMCTIDAKCNAYDALMMMTAKHIHHLPVTKYDN-LVGMVTVTDLI 279


>gi|329297573|ref|ZP_08254909.1| inosine 5'-monophosphate dehydrogenase [Plautia stali symbiont]
          Length = 488

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIERQADEVRKVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  D+ TL V  VM 
Sbjct: 98  QTVLPTTTLAEVKELTKRNGFAGYPVVNADNELVGIITGRDVR--FVTDM-TLPVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHMLGMITVKDFQKA 204


>gi|297797347|ref|XP_002866558.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312393|gb|EFH42817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 544

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     + +A   ++ +R   + + D  + L GI+T+ DI  R   +++N     V  VM
Sbjct: 67  VPATTTIYEACKRMASRRVDALLLTDSNEMLCGILTDKDIATRVISQEVNVEETPVSKVM 126

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  +L +TL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 127 TKNPMFVLSETLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 170



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++ +   +  V     ++     + E +  C  V+ E  KL+GI T  D + R   ++
Sbjct: 224 STIIPADTKVLKVSPTDTVLTVAKKMVEFQSSCAVVIIED-KLRGIFTSKDILMRVVAEN 282

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L  +   VE VM +NP+  + DT +  A+ ++ +     L V D   
Sbjct: 283 LAPSETLVETVMTQNPESTIVDTPIVEALHIMHEGKFLHLPVTDKEG 329


>gi|188996634|ref|YP_001930885.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931701|gb|ACD66331.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 140

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
           S      +     + +   I++ +  G V VV E  K  GI+T+ DI  R  +K +N   
Sbjct: 7   SRKEFISISQDASIKEVAGIMASRNVGSVVVV-EDGKPVGILTDRDIVVRLVNKGINPSE 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V ++M K+P  + ED  +  A+++++Q  +    VVD   K  GIV   D++
Sbjct: 66  VKVSELMTKDPICLQEDLGIFEALEIVKQEGVRRYPVVDKDGKMTGIVSLDDIV 119



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +S++ +  K    I +D  +     ++   N+  ++VV +  K +GI+   D++
Sbjct: 1   MSIKSISRKEFISISQDASIKEVAGIMASRNVGSVVVV-EDGKPVGILTDRDIV 53


>gi|159043001|ref|YP_001531795.1| putative signal transduction protein with CBS domains
           [Dinoroseobacter shibae DFL 12]
 gi|157910761|gb|ABV92194.1| putative signal transduction protein with CBS domains
           [Dinoroseobacter shibae DFL 12]
          Length = 136

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 45/104 (43%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
           V     +  A  +++    G +AVVD+  +  GI+T+ DI  R+  K      V  VM  
Sbjct: 14  VAPEASVQTAAALMANLDIGALAVVDD-GRPVGILTDRDIVVRHAAKAGTDALVGTVMTP 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  D  +  A  L+    I  L+V+D   + +G++   D+
Sbjct: 73  CVVTCRSDQTIERAAHLMADRQIRRLVVLDADNRVVGLLSLGDI 116



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  +M K    +  +  +  A  L+   +I  L VVDD  + +GI+   D++
Sbjct: 3   VSRIMRKPVMTVAPEASVQTAAALMANLDIGALAVVDD-GRPVGILTDRDIV 53


>gi|110806491|ref|YP_690011.1| putative DNA-binding transcriptional regulator [Shigella flexneri 5
           str. 8401]
 gi|24052987|gb|AAN44105.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|30042204|gb|AAP17929.1| hypothetical protein S2780 [Shigella flexneri 2a str. 2457T]
 gi|110616039|gb|ABF04706.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|281601961|gb|ADA74945.1| putative DNA-binding transcriptional regulator [Shigella flexneri
           2002017]
          Length = 306

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 ALRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|240112873|ref|ZP_04727363.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           MS11]
 gi|268598956|ref|ZP_06133123.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae MS11]
 gi|268583087|gb|EEZ47763.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae MS11]
          Length = 487

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITIKDILK 203


>gi|219851915|ref|YP_002466347.1| protein of unknown function DUF39 [Methanosphaerula palustris
           E1-9c]
 gi|219546174|gb|ACL16624.1| protein of unknown function DUF39 [Methanosphaerula palustris
           E1-9c]
          Length = 502

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 1/123 (0%)

Query: 214 GTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               V A  V    D   + +     +  A   L +     + V++   +L G++T  D+
Sbjct: 370 MHETVHAPRVCDIMDRHQVSITEDEEIRTAAKKLLKGETNHLTVLNLEGRLVGMVTTYDL 429

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +          V ++M +       D ++ VA Q L Q+NIS L V+D   + +G++  
Sbjct: 430 SKAVANPGKVSLVREIMTRKVITTTPDEVVDVAAQKLEQYNISALPVIDKAGRVLGMLTA 489

Query: 333 LDL 335
           LDL
Sbjct: 490 LDL 492



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 31/63 (49%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            H+ ++   V D+M ++   I ED  +  A + L +   + L V++   + +G+V   DL
Sbjct: 370 MHETVHAPRVCDIMDRHQVSITEDEEIRTAAKKLLKGETNHLTVLNLEGRLVGMVTTYDL 429

Query: 336 LRF 338
            + 
Sbjct: 430 SKA 432


>gi|222480642|ref|YP_002566879.1| CBS domain containing membrane protein [Halorubrum lacusprofundi
           ATCC 49239]
 gi|222453544|gb|ACM57809.1| CBS domain containing membrane protein [Halorubrum lacusprofundi
           ATCC 49239]
          Length = 164

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 53/151 (35%), Gaps = 38/151 (25%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  V     + DA    +   F    VVDE  ++ G++TE D+   F  D  TL  
Sbjct: 7   MESDVKTVAPDDDVADAFKKFARYPFSGFPVVDEEDRVVGVVTESDLVDLFEPDDETLWI 66

Query: 284 ----------------------------------SVEDVMIKNPKVILEDTLLTVAMQLL 309
                                              + DVM  +   +  DT +   + LL
Sbjct: 67  PIGLPPFVDTLTYQVKAPWADLDLGVDMVRNADRLISDVMSTDVATVTPDTDVDEVLDLL 126

Query: 310 --RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                NI+ + VVDD  + +GI+   D++R 
Sbjct: 127 SGDDPNINRVPVVDDDGRLVGIIARQDVIRA 157



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++M  + K +  D  +  A +   ++  S   VVD+  + +G+V   DL+
Sbjct: 1   MQARELMESDVKTVAPDDDVADAFKKFARYPFSGFPVVDEEDRVVGVVTESDLV 54



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK--RFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     + + + +LS        V VVD+  +L GII   D+ R F
Sbjct: 106 MSTDVATVTPDTDVDEVLDLLSGDDPNINRVPVVDDDGRLVGIIARQDVIRAF 158


>gi|320180561|gb|EFW55492.1| Putative transcriptional regulator [Shigella boydii ATCC 9905]
          Length = 282

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 71/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            VH   A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVHDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|290955592|ref|YP_003486774.1| CBS domain protein [Streptomyces scabiei 87.22]
 gi|260645118|emb|CBG68204.1| putative CBS domain protein [Streptomyces scabiei 87.22]
          Length = 226

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 18/123 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           V+   P  D +  +++++   V VV+   ++ G+++E D+          L+        
Sbjct: 21  VRRDTPFKDIVRAMTDRQVSAVPVVEGDGRVVGVVSEADLLPKEEFRDRDLTRAEQLRRM 80

Query: 285 ----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                      E+VM     V   D  L  A +++  + +  L V+DD  + +G+V   D
Sbjct: 81  SDLAKAGAVTAEEVMSAPAIVAHPDVTLAQAARIMAVNRVKRLPVIDDEGRLLGVVSRGD 140

Query: 335 LLR 337
           LL+
Sbjct: 141 LLK 143



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM      +  DT     ++ +    +S + VV+   + +G+V   DLL
Sbjct: 10  VSDVMSLPAVAVRRDTPFKDIVRAMTDRQVSAVPVVEGDGRVVGVVSEADLL 61



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 15/88 (17%), Positives = 32/88 (36%), Gaps = 2/88 (2%)

Query: 193 LLESRNFSENDFYVLHPGGKLG--TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           LL    F + D        ++         +          +      L  A  I++  R
Sbjct: 60  LLPKEEFRDRDLTRAEQLRRMSDLAKAGAVTAEEVMSAPAIVAHPDVTLAQAARIMAVNR 119

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              + V+D+  +L G+++ GD+ + F +
Sbjct: 120 VKRLPVIDDEGRLLGVVSRGDLLKVFLR 147


>gi|326386343|ref|ZP_08207966.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
           19370]
 gi|326209004|gb|EGD59798.1| signal-transduction protein [Novosphingobium nitrogenifigens DSM
           19370]
          Length = 121

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKV 295
           + DA+ +L+E+R G + V D G ++ GI +E D+  +      D+    V DVM      
Sbjct: 1   MADAVELLAERRIGALPVEDVGAEVAGIFSERDVLYSLQTNGADILRRKVRDVMTTPVIT 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              D  +  A+ L+ Q  I  L V+ +  + I  +   DL+++ I
Sbjct: 61  ASPDQSVLEALALMTQRRIRHLPVM-EDGRMIAFISIGDLVKYRI 104


>gi|253989306|ref|YP_003040662.1| inosine 5'-monophosphate dehydrogenase [Photorhabdus asymbiotica
           subsp. asymbiotica ATCC 43949]
 gi|253780756|emb|CAQ83918.1| inosine-5'-monophosphate dehydrogenase [Photorhabdus asymbiotica]
          Length = 517

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 45/217 (20%), Positives = 76/217 (35%), Gaps = 13/217 (5%)

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +        I   A+T ++  +V  H+ +      L  +  S      P  SA M    
Sbjct: 23  QLGEILLMLRIKKEALTFDDVLLVPAHSIVLPNTADLSTQLTSTIRLNVPMLSAAMDTVT 82

Query: 186 GDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
              LAIAL +     F   +  +     ++  +    S V+        V     L +  
Sbjct: 83  ESDLAIALAQEGGIGFIHKNMSIERQAEEVSRVKKHESGVV---TEPVTVTPKTTLREVK 139

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTL 301
            +     F    VV EG +L GIIT  D+   F  DL+   V  VM        + E   
Sbjct: 140 GLTERNGFAGYPVVTEGNELVGIITGRDVR--FVTDLDQ-PVTAVMTPKERLVTVKEGEA 196

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V +  + +  +   +VVD+    +G++   D  + 
Sbjct: 197 REVVLHKMHEKRVEKALVVDENFHLLGMITVKDFQKA 233


>gi|224127037|ref|XP_002319991.1| predicted protein [Populus trichocarpa]
 gi|222858367|gb|EEE95914.1| predicted protein [Populus trichocarpa]
          Length = 205

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+    I  + V+DD ++ IG+V   D++R 
Sbjct: 133 DIMTEENKLITVTPDTKVLKAMQLMTDKRIRHIPVIDD-KEMIGMVSIGDVVRA 185



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  + +   E ++     +E D+          +      D+M   + +  
Sbjct: 84  VKSMTQHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     ++ A+ ++++KR   + V+D+ + + G+++ GD+ R  
Sbjct: 144 VTPDTKVLKAMQLMTDKRIRHIPVIDDKE-MIGMVSIGDVVRAV 186


>gi|168007993|ref|XP_001756692.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692288|gb|EDQ78646.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 208

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
              +   + DA+  ++    G + VV     +KL GIITE D  R      +   T  V 
Sbjct: 76  WCSVDDTVYDAVKSMTAHNVGALLVVKSGAEKKLAGIITERDYLRKIIVQGRSSKTTKVG 135

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AM+L+  + I  + VV++     G+V   D++R 
Sbjct: 136 DIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVEESGM-KGMVSIGDVVRA 188



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 36/78 (46%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  VK    ++ A+ ++++ R   + VV+
Sbjct: 113 ITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVKPDTKVLRAMELMTDNRIRHIPVVE 172

Query: 259 EGQKLKGIITEGDIFRNF 276
           E   +KG+++ GD+ R  
Sbjct: 173 ESG-MKGMVSIGDVVRAV 189


>gi|108808306|ref|YP_652222.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis Antiqua]
 gi|108811430|ref|YP_647197.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis Nepal516]
 gi|145599488|ref|YP_001163564.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis Pestoides
           F]
 gi|149365331|ref|ZP_01887366.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis CA88-4125]
 gi|153950914|ref|YP_001400175.1| inosine 5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           IP 31758]
 gi|167398348|ref|ZP_02303872.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|170023548|ref|YP_001720053.1| inosine 5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           YPIII]
 gi|186896243|ref|YP_001873355.1| inosine 5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           PB1/+]
 gi|218929931|ref|YP_002347806.1| inosine 5'-monophosphate dehydrogenase [Yersinia pestis CO92]
 gi|229838448|ref|ZP_04458607.1| IMP dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229895149|ref|ZP_04510325.1| IMP dehydrogenase [Yersinia pestis Pestoides A]
 gi|229899015|ref|ZP_04514159.1| IMP dehydrogenase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229901689|ref|ZP_04516811.1| IMP dehydrogenase [Yersinia pestis Nepal516]
 gi|108775078|gb|ABG17597.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis Nepal516]
 gi|108780219|gb|ABG14277.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis Antiqua]
 gi|115348542|emb|CAL21482.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis CO92]
 gi|145211184|gb|ABP40591.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis Pestoides
           F]
 gi|149291744|gb|EDM41818.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis CA88-4125]
 gi|152962409|gb|ABS49870.1| inosine-5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           IP 31758]
 gi|167050852|gb|EDR62260.1| inosine-5'-monophosphate dehydrogenase [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|169750082|gb|ACA67600.1| inosine-5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           YPIII]
 gi|186699269|gb|ACC89898.1| inosine-5'-monophosphate dehydrogenase [Yersinia pseudotuberculosis
           PB1/+]
 gi|229681618|gb|EEO77712.1| IMP dehydrogenase [Yersinia pestis Nepal516]
 gi|229687960|gb|EEO80032.1| IMP dehydrogenase [Yersinia pestis biovar Orientalis str. India
           195]
 gi|229694814|gb|EEO84861.1| IMP dehydrogenase [Yersinia pestis biovar Orientalis str. PEXU2]
 gi|229701911|gb|EEO89934.1| IMP dehydrogenase [Yersinia pestis Pestoides A]
 gi|320016005|gb|ADV99576.1| IMP dehydrogenase [Yersinia pestis biovar Medievalis str. Harbin
           35]
          Length = 487

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESRLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +  ++VVDD     G++   D  + 
Sbjct: 155 PKERLVTVKEGETREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKA 204


>gi|256847707|ref|ZP_05553152.1| 6-phospho 3-hexuloisomerase [Lactobacillus coleohominis 101-4-CHN]
 gi|256715396|gb|EEU30372.1| 6-phospho 3-hexuloisomerase [Lactobacillus coleohominis 101-4-CHN]
          Length = 280

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 3/161 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  ++    + Q   A   I   K RV + GIG SG+   + A  L   G P+F +  + 
Sbjct: 95  LAETMAMVSTKQLRQAANLIHGAK-RVYVFGIGSSGYNAQEFAQRLMRMGKPAFAMTESN 153

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                   +  +D++I LS SGS+ E+ + +  +R+    +IA+T+   S++   +D++ 
Sbjct: 154 MMTIASATMQDNDIVIALSVSGSTPEVCSAVRDSRKNGATIIAVTAFKNSLLGKMSDLLF 213

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            +        +      S      + D L   LL+  +F  
Sbjct: 214 QIKSTELVGDYD--FINSQFAVTYVIDMLTQMLLQFTDFRA 252


>gi|237653431|ref|YP_002889745.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237624678|gb|ACR01368.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 148

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL- 280
           +   G +   V+    + DA++++++   GCV V D   KL GI TE D   +   K L 
Sbjct: 9   LEAKGSTFHAVRPTDSVFDALSLMAQFDIGCVLVTDSD-KLVGIFTERDYARKVVLKGLV 67

Query: 281 -NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + V D+M  NP  +         M  +       + VV++  K +GIV   D+++
Sbjct: 68  SRDVKVGDLMTPNPYTVGLTGTADDVMATMTAKRFRHIPVVEE-GKVLGIVTIGDMVK 124



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+         G +            +   V +     D +  ++ KRF  + VV 
Sbjct: 52  FTERDYA--RKVVLKGLVSRDVKVGDLMTPNPYTVGLTGTADDVMATMTAKRFRHIPVV- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  K+ GI+T GD+ ++ 
Sbjct: 109 EEGKVLGIVTIGDMVKSI 126


>gi|83716568|ref|YP_439711.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|167578151|ref|ZP_02371025.1| CBS domain protein [Burkholderia thailandensis TXDOH]
 gi|167616282|ref|ZP_02384917.1| CBS domain protein [Burkholderia thailandensis Bt4]
 gi|257142850|ref|ZP_05591112.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|83650393|gb|ABC34457.1| CBS domain protein [Burkholderia thailandensis E264]
          Length = 153

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I +V+    + +AI +++EK  G + V+D    + GI+TE D  R      +    
Sbjct: 15  SGRTIHMVEKSDSVYNAIKLMAEKSIGALLVMDGAN-IAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 127



 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 114 -GKLIGLVSIGDLVKSVIAD 132


>gi|254413597|ref|ZP_05027367.1| chloride transporter, ClC family, putative [Microcoleus
           chthonoplastes PCC 7420]
 gi|196179704|gb|EDX74698.1| chloride transporter, ClC family, putative [Microcoleus
           chthonoplastes PCC 7420]
          Length = 871

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 52/113 (46%), Gaps = 10/113 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--------TLSV 285
            +   L DA+ ++S        VVDE   L GII++ D+ +      N        T  +
Sbjct: 453 SLHMTLDDALQMVSRSTHQGFPVVDE-GTLVGIISQSDLTQATKMQGNPPRCPFPGTTPL 511

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++M  +P  +     L   + LL ++++S L V  + +K +GI+   D++R 
Sbjct: 512 AEIMTSHPITVKPTASLVDVLYLLNRYHLSRLPVT-EGRKLLGIITRSDIIRA 563



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                  VK    L+D + +L+      + V  EG+KL GIIT  DI R     L++ +
Sbjct: 515 MTSHPITVKPTASLVDVLYLLNRYHLSRLPVT-EGRKLLGIITRSDIIRAELDQLDSKT 572



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ ED+M +  + +     L  A+Q++ +       VVD+    +GI+   DL + 
Sbjct: 439 LTAEDLMQRQVETLSLHMTLDDALQMVSRSTHQGFPVVDE-GTLVGIISQSDLTQA 493


>gi|170077188|ref|YP_001733826.1| voltage gated chloride channel [Synechococcus sp. PCC 7002]
 gi|169884857|gb|ACA98570.1| Voltage gated chloride channel [Synechococcus sp. PCC 7002]
          Length = 878

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/100 (32%), Positives = 50/100 (50%), Gaps = 3/100 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           L D + ILSE       V+ +  KL GI+T+GD+ +        L+V  VM +    +  
Sbjct: 463 LKDLVPILSESPHRGFPVL-KQGKLVGIVTQGDLAQ-MAAQGKNLTVAQVMQRKVITVSP 520

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L+  + LL ++ IS L VVD+ Q   GI+   D++R 
Sbjct: 521 RASLSDVLYLLNRYQISRLPVVDNDQ-LQGIITRSDIIRA 559



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               +  V     L D + +L+  +   + VVD   +L+GIIT  DI R   ++L   S
Sbjct: 511 MQRKVITVSPRASLSDVLYLLNRYQISRLPVVDND-QLQGIITRSDIIRAEAQELLGKS 568


>gi|148265152|ref|YP_001231858.1| inosine-5'-monophosphate dehydrogenase [Geobacter uraniireducens
           Rf4]
 gi|146398652|gb|ABQ27285.1| inosine-5'-monophosphate dehydrogenase [Geobacter uraniireducens
           Rf4]
          Length = 489

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 81/199 (40%), Gaps = 12/199 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
            +T ++  ++  H+ I+   + L            P  SA M        AI++      
Sbjct: 9   GLTFDDVLLLPAHSQILPRDVDLSTHLSRNILLNIPLVSAAMDTVTEARAAISMAREGGI 68

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F   +F +     ++  +    S ++    ++   +    + +A+ I+++ R   V + 
Sbjct: 69  GFIHKNFSIADQAMEVDKVKKSESGMIVDPITM---RPHQKIREALEIMAKYRISGVPIT 125

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISV 316
               KL GI+T  D+   F  +L+ L + + M K N   +   T L  A + L+   +  
Sbjct: 126 KSNGKLVGILTNRDLR--FETNLDLL-ISERMTKRNLVTVPVGTTLEQAKEHLKHTRVEK 182

Query: 317 LMVVDDCQKAIGIVHFLDL 335
           L+VVD  +   G++   D+
Sbjct: 183 LLVVDSDKNLKGLITIKDI 201


>gi|209515410|ref|ZP_03264276.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. H160]
 gi|209504130|gb|EEA04120.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. H160]
          Length = 150

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 58/124 (46%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V     L     I  +  F  V VV E ++L+G++++ D+ R           
Sbjct: 7   MTRRVVTVGFDDTLKTIKEIFEQAGFHHVLVV-EDRRLEGVVSDRDLLRALSPFIDSVVE 65

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            H+D+ TLS  V  +M + P  +     +T A+QL   H IS + VVD   + +GIV + 
Sbjct: 66  THRDVGTLSKRVHQIMSRKPITLEPHADVTEAIQLFLTHPISCIPVVDSEFRPVGIVSWR 125

Query: 334 DLLR 337
           D+L+
Sbjct: 126 DVLK 129



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +ED+M +    +  D  L    ++  Q     ++VV + ++  G+V   DLLR 
Sbjct: 1   MKIEDLMTRRVVTVGFDDTLKTIKEIFEQAGFHHVLVV-EDRRLEGVVSDRDLLRA 55


>gi|166031213|ref|ZP_02234042.1| hypothetical protein DORFOR_00900 [Dorea formicigenerans ATCC
           27755]
 gi|166029060|gb|EDR47817.1| hypothetical protein DORFOR_00900 [Dorea formicigenerans ATCC
           27755]
          Length = 484

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 62/180 (34%), Gaps = 12/180 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L        H   P  SA M       +AIA+            ++H    +      
Sbjct: 28  VDLSTYLTKKIHLNIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEE 82

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V  S + +            L DA  ++++ R   V +  E  KL GIIT  D+   
Sbjct: 83  VDRVKRSENGVITDPFYLSPDHTLADANELMAKFRISGVPIT-ENGKLVGIITNRDLK-- 139

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F +D +    E +  +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 140 FEEDFSKKIKESMTSEGLITAPEGITLEEAKRILAKARKEKLPIVDKDFHLKGLITIKDI 199


>gi|144900070|emb|CAM76934.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 147

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           +     + +A  +L+  R G V  V     + GI++E DI R   +      +  V D+M
Sbjct: 19  ISPQASIAEAARLLASHRIGAVIAVTANNAIAGILSERDIVRGLAQSDAACTSAKVADLM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N +   ED  + + M+ +    I  L VVD   +  G+V   D+++
Sbjct: 79  TANVQTCHEDDSVALLMKTMTDRRIRHLPVVDGGGRLTGMVTIGDVVK 126



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I     +  A +LL  H I  ++ V       GI+   D++R
Sbjct: 17  VTISPQASIAEAARLLASHRIGAVIAVTANNAIAGILSERDIVR 60



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 24/49 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              ++        +   +  ++++R   + VVD G +L G++T GD+ +
Sbjct: 78  MTANVQTCHEDDSVALLMKTMTDRRIRHLPVVDGGGRLTGMVTIGDVVK 126


>gi|77918821|ref|YP_356636.1| inosine-5'-monophosphate dehydrogenase [Pelobacter carbinolicus DSM
           2380]
 gi|77544904|gb|ABA88466.1| inosine-5'-monophosphate dehydrogenase [Pelobacter carbinolicus DSM
           2380]
          Length = 491

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 59/168 (35%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H         +    V  S   + +
Sbjct: 43  NVPLLSAAMDTVTESRAAIGMAREGG-----MGIIHKNMTPEEQGLEVDQVKKSESGMIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     +  A+ ++ + R   V +     KL GI+T  D+   F   L+   + +V
Sbjct: 98  DPITMEPEQKIYQALEVMEKYRISGVPIT-SKGKLVGILTNRDLR--FETQLDQ-PIANV 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N   +   T L  A   L +H I  L+VVD      G++   D+
Sbjct: 154 MTKENLVTVPPGTTLEEAKYHLHKHRIEKLLVVDAQYHLKGLITIKDI 201


>gi|282895544|ref|ZP_06303681.1| Mannose-1-phosphate guanyltransferase CBS pair associated
           [Raphidiopsis brookii D9]
 gi|281199577|gb|EFA74440.1| Mannose-1-phosphate guanyltransferase CBS pair associated
           [Raphidiopsis brookii D9]
          Length = 349

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 5/112 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
           +V    PL +AI  + +       V++    L G++T+GDI R     KDL  + V +VM
Sbjct: 10  VVFRETPLREAIAKIDKSALQVALVLNPDNTLGGLVTDGDIRRFILSGKDL-DVPVCEVM 68

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              P  +LE    +  + L+R+  I  L +V+   + + +    DL+  GI+
Sbjct: 69  NSQPTTVLESVPRSEMLALMRRKVIHHLPLVNAEHQVVDLATLDDLI--GIL 118


>gi|148555441|ref|YP_001263023.1| signal-transduction protein [Sphingomonas wittichii RW1]
 gi|148500631|gb|ABQ68885.1| putative signal-transduction protein with CBS domains [Sphingomonas
           wittichii RW1]
          Length = 143

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V +  P+++A+ +L++KR G V V+ E +++ GI++E D+     +D        V + M
Sbjct: 18  VSLDMPVVEALALLADKRIGAVPVI-EREQVVGILSERDMIYGMRRDGAAFLDRPVREAM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +   T    A+ ++ +  I  L VVDD    +G V   DL++ 
Sbjct: 77  TSPVITVTSVTTPLEALAMMTRRRIRHLPVVDD-GVLVGFVSIGDLVKA 124



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            +   I +  +  PL +A+ +++ +R   + VVD+   L G ++ GD+ +   + +   +
Sbjct: 76  MTSPVITVTSVTTPL-EALAMMTRRRIRHLPVVDD-GVLVGFVSIGDLVKARMERIEQEA 133

Query: 285 VE 286
             
Sbjct: 134 AA 135



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  D  +  A+ LL    I  + V++  Q  +GI+   D++
Sbjct: 16  ISVSLDMPVVEALALLADKRIGAVPVIEREQ-VVGILSERDMI 57


>gi|325289973|ref|YP_004266154.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965374|gb|ADY56153.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 854

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 68/204 (33%), Gaps = 11/204 (5%)

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS-------AIMQLAIGDALAIALL 194
           +A+ +     +       L +         G +   +       +    A  D  A A+L
Sbjct: 224 LAVLANRIGELERPDTWFLIVKMGQRVYLVGRSRGDALPVNKILSGFGGAGHDKAASAVL 283

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +     +  F +     +         D+M     +  V     + +   +L        
Sbjct: 284 KDTGIEQALFSLKEQIAEFVREPHLVQDIM--SFPVKTVSSDTVMEEVGKLLLRYGHTGF 341

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            VVD   +L G+I+  D+ +     L    V+  M K    +  D       +++ QH++
Sbjct: 342 PVVD-HGRLVGVISRRDVDKALKHGLQHAPVKGFMTKEVITVQPDLGWEEVQRIMIQHDV 400

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
             + VV      +GIV   D+LR 
Sbjct: 401 GRIPVV-KEGFLVGIVSRSDVLRL 423


>gi|158425292|ref|YP_001526584.1| hypothetical protein AZC_3668 [Azorhizobium caulinodans ORS 571]
 gi|158332181|dbj|BAF89666.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
          Length = 143

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 4/118 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
              S+  +     L DA+  LSE R G +  VD+  +L GI++E D+ R       ++ +
Sbjct: 10  KPSSMVTISPDASLTDAVKSLSEHRIGAIVAVDDNGRLAGILSERDVVRILGVRGPEVLS 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V  VM +       D  +   M+ + +     + VV + ++ IGI+   D+++F +
Sbjct: 70  EPVSAVMTRAVVTCARDETIQGIMERMTRGRFRHVPVV-EGERLIGIISIGDVVKFRV 126


>gi|113866713|ref|YP_725202.1| CBS domain-containing protein [Ralstonia eutropha H16]
 gi|113525489|emb|CAJ91834.1| CBS-domain-containing membrane protein [Ralstonia eutropha H16]
          Length = 379

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/218 (18%), Positives = 75/218 (34%), Gaps = 16/218 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F+  L+ + +   + ++             +     + P+    +  A  DA   AL   
Sbjct: 161 FNSMLLLMMALAFNNLSRRRYPHRPPEPAMQHGTKDVPPSQRVGVTRADLDA---ALKVR 217

Query: 197 RNF------SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
             F            V          F            + +V    P  +A  +LS  R
Sbjct: 218 GEFLDIEEDDLEQILVAAQLRAYRRHFGNVLCGEIMSRDVVMVTPDQPAHEAGHLLSRHR 277

Query: 251 FGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
              + VVD  ++L GIIT+ D F   R+        +V D+M +       +  +    Q
Sbjct: 278 IKALPVVDATRRLVGIITQSDFFAAQRDTGARRLAGTVRDLMTRAVVTARPEQPMVELAQ 337

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLD----LLRFGII 341
                 +    V+DD ++ +G+V   D    LL+ G++
Sbjct: 338 AFSDGGLHHAPVIDDHRRVVGMVTQSDLVAALLKSGVM 375


>gi|146339451|ref|YP_001204499.1| hypothetical protein BRADO2437 [Bradyrhizobium sp. ORS278]
 gi|146192257|emb|CAL76262.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
           ORS278]
          Length = 141

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 10/92 (10%)

Query: 257 VDEGQKLKGIITEGDIFRNFH----------KDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           V E  ++ GI+T+ D+ + F            DL   +V DVM      +  DT LT  +
Sbjct: 43  VVENDEVIGIVTKFDVLKCFAFTPNQMLPRYSDLMNRTVADVMTSEFIYVRPDTKLTRVL 102

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           QL+ +H I  L V D   + +GI+   D++R 
Sbjct: 103 QLMVEHRIRSLPVTDGDNRLVGIIAREDIVRA 134



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 19/53 (35%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                  V+    L   + ++ E R   + V D   +L GII   DI R    
Sbjct: 85  MTSEFIYVRPDTKLTRVLQLMVEHRIRSLPVTDGDNRLVGIIAREDIVRALAA 137


>gi|94266305|ref|ZP_01290008.1| CBS [delta proteobacterium MLMS-1]
 gi|93453096|gb|EAT03572.1| CBS [delta proteobacterium MLMS-1]
          Length = 226

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     L+ A  ++ E     + VV    KL GI+T+ D+                +  L
Sbjct: 14  VDENTSLMRATRVMKENNIRRLPVV-SHGKLIGIVTDRDVKDASPSKTASLDIHELYYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + V+DVM  +P  +     L +A  ++ +  IS L VVDD    IG++   D+LR 
Sbjct: 73  SEMKVKDVMTASPLTLRGKDSLELAAVIMLEDKISGLPVVDDTSHLIGLLSETDVLRA 130



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +ED M KN   + E+T L  A ++++++NI  L VV    K IGIV   D
Sbjct: 3   IEDWMAKNVLTVDENTSLMRATRVMKENNIRRLPVV-SHGKLIGIVTDRD 51


>gi|257068058|ref|YP_003154313.1| inosine-5'-monophosphate dehydrogenase [Brachybacterium faecium DSM
           4810]
 gi|256558876|gb|ACU84723.1| inosine-5'-monophosphate dehydrogenase [Brachybacterium faecium DSM
           4810]
          Length = 499

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 60/169 (35%), Gaps = 9/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +AIA+            +LH    +         V  +      
Sbjct: 44  RIPLASAAMDTVTESRMAIAMARHGGIG-----ILHRNLSIEDQAHQVDLVKRTQTGRIT 98

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L D   +  + R   + VV E Q+L GI T  D+      + +T  V DV
Sbjct: 99  NPVTIGPEATLEDFDALCGQFRVSGLPVVTEDQRLIGICTNRDLRFIPVAEWSTTKVVDV 158

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        ED     A  LLR++    L ++D   +  G++   D ++
Sbjct: 159 MTTELFTAPEDVTPEEATALLRKNKRERLPLIDADGRLTGLITVKDFVK 207


>gi|27382443|ref|NP_773972.1| inosine-5'-monophosphate dehydrogenase protein [Bradyrhizobium
           japonicum USDA 110]
 gi|27355614|dbj|BAC52597.1| blr7332 [Bradyrhizobium japonicum USDA 110]
          Length = 150

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 7/128 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             L +   DVMH G  +  V    P+ +   ++     GC+ +  E  KL G++T+ DI 
Sbjct: 8   RRLAMKVKDVMHKG--VDWVSPDTPIAEIAKLMRAHDIGCIPI-GEDDKLVGMVTDRDIV 64

Query: 274 -RNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +       D    +  DVM +      ED  L  AM  + +  +  L V++  ++ +GI
Sbjct: 65  CKGLASHTFDARRATARDVMTEGIHCCREDDDLAKAMHHMEKLQVRRLPVINKSKRMVGI 124

Query: 330 VHFLDLLR 337
           +   DL R
Sbjct: 125 ISLGDLSR 132



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +    + V+DVM K    +  DT +    +L+R H+I  + + +D  K +G+V   D+
Sbjct: 5   LQQRRLAMKVKDVMHKGVDWVSPDTPIAEIAKLMRAHDIGCIPIGEDD-KLVGMVTDRDI 63

Query: 336 LRFGI 340
           +  G+
Sbjct: 64  VCKGL 68



 Score = 39.1 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 32/63 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + I   +    L  A+  + + +   + V+++ +++ GII+ GD+ R+   DL T +V
Sbjct: 84  MTEGIHCCREDDDLAKAMHHMEKLQVRRLPVINKSKRMVGIISLGDLSRSASNDLLTETV 143

Query: 286 EDV 288
             V
Sbjct: 144 RSV 146


>gi|161485888|ref|NP_708398.2| putative DNA-binding transcriptional regulator [Shigella flexneri
           2a str. 301]
 gi|161486453|ref|NP_838119.2| putative DNA-binding transcriptional regulator [Shigella flexneri
           2a str. 2457T]
 gi|313651054|gb|EFS15454.1| uncharacterized HTH-type transcriptional regulator yfhH [Shigella
           flexneri 2a str. 2457T]
 gi|332754094|gb|EGJ84465.1| hypothetical protein SF434370_2777 [Shigella flexneri 4343-70]
 gi|332754176|gb|EGJ84545.1| hypothetical protein SFK671_3174 [Shigella flexneri K-671]
 gi|332756131|gb|EGJ86482.1| hypothetical protein SF274771_3117 [Shigella flexneri 2747-71]
 gi|332765916|gb|EGJ96127.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           2930-71]
 gi|333000547|gb|EGK20126.1| hypothetical protein SFVA6_3449 [Shigella flexneri VA-6]
 gi|333000878|gb|EGK20449.1| hypothetical protein SFK218_3568 [Shigella flexneri K-218]
 gi|333002353|gb|EGK21917.1| hypothetical protein SFK272_3350 [Shigella flexneri K-272]
 gi|333016175|gb|EGK35507.1| hypothetical protein SFK227_3186 [Shigella flexneri K-227]
 gi|333016182|gb|EGK35513.1| hypothetical protein SFK304_3382 [Shigella flexneri K-304]
          Length = 282

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 ALRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|291613932|ref|YP_003524089.1| inosine-5'-monophosphate dehydrogenase [Sideroxydans lithotrophicus
           ES-1]
 gi|291584044|gb|ADE11702.1| inosine-5'-monophosphate dehydrogenase [Sideroxydans lithotrophicus
           ES-1]
          Length = 486

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 41/210 (19%), Positives = 86/210 (40%), Gaps = 18/210 (8%)

Query: 137 FSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I   A+T ++  ++  H++++   ++L  +         P  SA M       LAIAL
Sbjct: 1   MRIVQKALTFDDVLLLPAHSNVLPRDVSLRSQLTRNITLNIPLLSAAMDTVTEARLAIAL 60

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEK 249
            +          ++H            + V             +     + D + +  + 
Sbjct: 61  AQEGGIG-----IVHKNMTAREQAAQVAKVKRFESGVVKDPITIAPNMTVRDVLNLTRQH 115

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQ 307
           +   + V+ EG+K+ GI+T  D+   F  +L+  S+ ++M       V+ E+     A  
Sbjct: 116 KISGLPVL-EGKKVVGIVTNRDLR--FESNLDQ-SITNIMTPRDRLIVVKENANRDEARN 171

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ +H I  ++VV+D  +  G++   D+L+
Sbjct: 172 LMHKHRIERVLVVNDAFELCGLITVKDILK 201


>gi|158431294|pdb|2YVY|A Chain A, Crystal Structure Of Magnesium Transporter Mgte Cytosolic
           Domain, Mg2+ Bound Form
          Length = 278

 Score = 84.6 bits (208), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 153 ACHADIVLTLPKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVL--- 207
           A  A+++  L  E ++      P      I++    D LA AL   R      F  L   
Sbjct: 58  AKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDL 117

Query: 208 -----HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVV 257
                    +    +               V+ G  + + +  L            + VV
Sbjct: 118 LDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV 177

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +LKG+++  D+     +      V ++M      +  DT      +L+  ++ +VL
Sbjct: 178 DEKGRLKGVLSLRDLIVADPR----TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVL 233

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD+  + +GIV   D+L
Sbjct: 234 PVVDEEGRLVGIVTVDDVL 252



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V+      +   ++++  F  + VVDE  +L GI+T  D+     
Sbjct: 197 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 256

Query: 278 ----KDLNTLSVEDV 288
               +D++ L   DV
Sbjct: 257 AEATEDIHKLGAVDV 271


>gi|206561705|ref|YP_002232470.1| putative regulatory protein [Burkholderia cenocepacia J2315]
 gi|198037747|emb|CAR53691.1| putative regulatory protein [Burkholderia cenocepacia J2315]
          Length = 282

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|73540782|ref|YP_295302.1| RpiR family transcriptional regulator [Ralstonia eutropha JMP134]
 gi|72118195|gb|AAZ60458.1| transcriptional regulator, RpiR family [Ralstonia eutropha JMP134]
          Length = 318

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 70/178 (39%), Gaps = 7/178 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++     A +        L S+ ++L  +   Q    +  +   + R+   G G SG + 
Sbjct: 94  EDGPADIAGKVFDRTIATLMSVRNALSAD---QIEHGIRLLARAR-RIEFYGCGNSGIVA 149

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             +       G P+              ++   D+ +++S SG + ++      AR    
Sbjct: 150 LDIQHKFFRLGMPTTAYSDPHVFSMSAALLGPGDVAVLVSNSGRTWDMLTAATLARSSGA 209

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            ++A+T  + S +A  AD+ +    E +S  +   P TS I  L +GD LA  +   R
Sbjct: 210 SVLALT-HSGSPLAKLADVCVFSDVEEDSEVY--TPMTSRICHLVLGDVLAAGVALER 264


>gi|297616726|ref|YP_003701885.1| hypothetical protein Slip_0536 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144563|gb|ADI01320.1| CBS domain containing protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 879

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 58/141 (41%), Gaps = 7/141 (4%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+ +E     +    + G               +  V     + +A  I+       + V
Sbjct: 290 RSLTEEVMKRVEESARPGLTARDI-----MSTPVKTVSAHLTMEEAGRIMLRYGHTGMPV 344

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           VD    + G+I+  D+ +    DL    V+  M +    ++ +T +    +L+ +H++  
Sbjct: 345 VDGEN-VVGVISRRDVDKARMHDLGHAPVKGYMSRTVISVVPETPVKELQRLMVEHDVGR 403

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V+++  + +GIV   D+LR
Sbjct: 404 LPVIEE-GRLVGIVSRTDILR 423



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +TE  + R        L+  D+M    K +     +  A +++ ++  + + VVD     
Sbjct: 292 LTEEVMKRVEESARPGLTARDIMSTPVKTVSAHLTMEEAGRIMLRYGHTGMPVVDGEN-V 350

Query: 327 IGIVHFLDLLRF 338
           +G++   D+ + 
Sbjct: 351 VGVISRRDVDKA 362



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V    P+ +   ++ E   G + V+ E  +L GI++  DI R  H
Sbjct: 383 VVPETPVKELQRLMVEHDVGRLPVI-EEGRLVGIVSRTDILRTLH 426


>gi|238753868|ref|ZP_04615228.1| Inosine-5'-monophosphate dehydrogenase [Yersinia ruckeri ATCC
           29473]
 gi|238707856|gb|EEQ00214.1| Inosine-5'-monophosphate dehydrogenase [Yersinia ruckeri ATCC
           29473]
          Length = 532

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 48/232 (20%), Positives = 85/232 (36%), Gaps = 19/232 (8%)

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCP 170
             I   +S  S E+  +L   +       A+T ++  +V  H+ +      L  +  +  
Sbjct: 30  TAIFYLFSNHSGEILPMLRITKE------ALTFDDVLLVPAHSTVLPNTADLGTQLTATI 83

Query: 171 HGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
               P  SA M      +LAIAL +     F   +  +     ++  +    S V+    
Sbjct: 84  RLNIPMLSAAMDTVTESSLAIALAQEGGLGFIHKNMSIERQADEVSRVKKHESGVV---T 140

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  V
Sbjct: 141 EPQTVTPITTLRQVKELTARNGFAGYPVVTEDYELLGIITGRDVR--FVTDLDQ-PVTAV 197

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E     V +Q + ++ +  ++VVD+     G++   D  + 
Sbjct: 198 MTPKARLVTVKEGEARDVVLQKMHENRVEKVLVVDNNFHLRGMITVKDFQKA 249


>gi|115350608|ref|YP_772447.1| RpiR family transcriptional regulator [Burkholderia ambifaria AMMD]
 gi|171319961|ref|ZP_02909036.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           MEX-5]
 gi|172059641|ref|YP_001807293.1| RpiR family transcriptional regulator [Burkholderia ambifaria
           MC40-6]
 gi|115280596|gb|ABI86113.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           AMMD]
 gi|171094791|gb|EDT39830.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           MEX-5]
 gi|171992158|gb|ACB63077.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           MC40-6]
          Length = 282

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAISLLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|327194480|gb|EGE61340.1| hypothetical protein RHECNPAF_122100169 [Rhizobium etli CNPAF512]
          Length = 290

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 43/197 (21%), Positives = 76/197 (38%), Gaps = 9/197 (4%)

Query: 3   FYFSHF-KSVTRKGHSLM--KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +  SH+ +  T + H  +  ++S+ +   +      + L    + L       F  A E 
Sbjct: 75  YAVSHYNRLPTAEMHQELSAEDSSREIVQKVFRTSIQALEETLAILD---LDGFDRAAEL 131

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     R    G+G S  I   +A      G        +        ++  +D+ +  S
Sbjct: 132 LARAGHR-DFYGVGGSAQIARDVAHKFLRIGIRVNVHDDSHMMLMSGSLLGPEDVAVGFS 190

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG++  +   +  AR+     IAIT+   S +A  ADIVL    +        A   + 
Sbjct: 191 HSGNTTAVIDAILLARKSGARTIAITNYGGSALAQIADIVLCSTAQGSPLMGENA--AAR 248

Query: 180 IMQLAIGDALAIALLES 196
           I QL I DAL +A+ + 
Sbjct: 249 IAQLNILDALFVAVAQR 265


>gi|323706339|ref|ZP_08117904.1| Nucleotidyl transferase [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323534301|gb|EGB24087.1| Nucleotidyl transferase [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 353

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              ++   C + +AI  L+E R   + VVD+  +L G +T+GDI R    +++    V  
Sbjct: 6   KSVIISDKCIIKNAIKQLNENRLQILLVVDDEYRLVGTVTDGDIRRAILNNVSLEQPVFV 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +M K PK +       VA +L+ ++ I  + V+D+ +K I ++
Sbjct: 66  IMNKKPKYVYNGQE-EVAKELMLKYKIKTIPVLDNEKKVIDLI 107



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 26/45 (57%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +I +  ++  A++ L ++ + +L+VVDD  + +G V   D+ R 
Sbjct: 8   VIISDKCIIKNAIKQLNENRLQILLVVDDEYRLVGTVTDGDIRRA 52


>gi|291535341|emb|CBL08453.1| inosine-5'-monophosphate dehydrogenase [Roseburia intestinalis
           M50/1]
          Length = 484

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAAMDTVTEHRMAIAMARQGGIG-----IIHKNMSIQAQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG KL GIIT  D+   F  D  T  + + 
Sbjct: 96  DPFYLSPDHTLQDAEDLMRKFRISGVPIC-EGGKLVGIITNRDLK--FETDF-TKKISES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   L  A ++L +     L +VD      G++   D+
Sbjct: 152 MTSENLITAPEGITLEEAKKILAKARKEKLPIVDKDFHLKGLITIKDI 199


>gi|146343631|ref|YP_001208679.1| hypothetical protein BRADO6870 [Bradyrhizobium sp. ORS278]
 gi|146196437|emb|CAL80464.1| conserved hypothetical protein with CBS domain [Bradyrhizobium sp.
           ORS278]
          Length = 249

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 25/141 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN---- 275
                   S+  V  G P+ +A  I+     G + V+D   +L G++T+GD + R     
Sbjct: 2   RAHQIMTRSVITVTPGTPVAEAARIMLRNHIGGLPVIDASGRLVGMVTDGDFLRRAELGT 61

Query: 276 ----------------FHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                              D    +  +V D+M +    +  D  L    +++ + +I  
Sbjct: 62  ERKQGRWLDLLVGRGRIGADFVHSHGRTVGDIMSRPAVTVGTDASLAEIAEVMEKRSIKR 121

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V++  Q   G+V   D ++
Sbjct: 122 LPVMNGDQ-LAGMVTQTDFVQ 141



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M ++   +   T +  A +++ +++I  L V+D   + +G+V   D LR
Sbjct: 1   MRAHQIMTRSVITVTPGTPVAEAARIMLRNHIGGLPVIDASGRLVGMVTDGDFLR 55


>gi|126347862|emb|CAJ89582.1| putative transport protein [Streptomyces ambofaciens ATCC 23877]
          Length = 223

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 53/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
             D++  V+ G P  +   +L E     V VVDE  +  G+++E D+ +           
Sbjct: 10  MSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQKMWGQDLAGPP 69

Query: 277 ---------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                        +      +M        ED  +  A +++ +H I  L+VVD+  + I
Sbjct: 70  GHGDGPPSAGAKASATDAAGLMTSPALCAREDWSVVDAARVMARHGIKRLLVVDEGGRLI 129

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 130 GVVSRSDLLR 139



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V D+M      +   T       LL +++I+ + VVD+  + +G+V   DLL+ 
Sbjct: 1   MKHQKVCDLMSDAVVRVQRGTPFKEIAHLLLEYDITAVPVVDEENRPVGVVSEADLLQK 59



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 25/45 (55%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +    ++DA  +++      + VVDEG +L G+++  D+ R F +
Sbjct: 99  REDWSVVDAARVMARHGIKRLLVVDEGGRLIGVVSRSDLLRVFLR 143


>gi|75906423|ref|YP_320719.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
 gi|75700148|gb|ABA19824.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
          Length = 1344

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 233 VKIGCPLIDAITIL---------SEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLN 281
           V     L+D I ++         S   F    +V E +KL GI T  D+ R      D++
Sbjct: 23  VLPDTLLVDVIALMNPVSRCTIVSASNFSSCVLVVEEKKLVGIFTLRDVVRLTGVGVDIS 82

Query: 282 TLSVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +VM +      +        A+  +RQH+I  L VVD+  + +G++ 
Sbjct: 83  RKKISEVMTQPVISLTLAAAQNALTALAFMRQHHIRHLPVVDEQGQLLGLIT 134



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
           A+  + +     + VVDE  +L G+IT+  I +       L    V +VM+      L  
Sbjct: 108 ALAFMRQHHIRHLPVVDEQGQLLGLITQDRIRQVVQPAHLLKLRCVTEVMVTEIIHALPT 167

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLR 337
           T +    Q++    IS +++V   +     +G++   D+L+
Sbjct: 168 TSVLELSQMMSDRRISCVVIVAPQETKLIPVGMITEKDILK 208



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDI 272
              C ++VM +     L      +++   ++S++R  CV +V   +      G+ITE DI
Sbjct: 149 KLRCVTEVMVTEIIHAL--PTTSVLELSQMMSDRRISCVVIVAPQETKLIPVGMITEKDI 206

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   +  D+     + VM      I     L     L++   +  L+VV +  +  G+V
Sbjct: 207 LKVQLQGLDIAQTPAQTVMSSPVFSISPRESLWTVNLLMQARGVRRLVVVGEQGQMQGLV 266

Query: 331 HFLDLLR 337
              +LL+
Sbjct: 267 TQTNLLQ 273



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 12/72 (16%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR---------QHNISV-LMVVDDCQKAIGI 329
           ++  ++E VM   P  +L DTLL   + L+            N S  ++VV++ +K +GI
Sbjct: 7   VDLPTIEQVMECYPLTVLPDTLLVDVIALMNPVSRCTIVSASNFSSCVLVVEE-KKLVGI 65

Query: 330 VHFLDLLRF-GI 340
               D++R  G+
Sbjct: 66  FTLRDVVRLTGV 77


>gi|227877703|ref|ZP_03995739.1| RpiR family transcriptional regulator [Lactobacillus crispatus
           JV-V01]
 gi|256850037|ref|ZP_05555467.1| transcriptional regulator [Lactobacillus crispatus MV-1A-US]
 gi|262047323|ref|ZP_06020280.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293381539|ref|ZP_06627529.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|227862691|gb|EEJ70174.1| RpiR family transcriptional regulator [Lactobacillus crispatus
           JV-V01]
 gi|256713009|gb|EEU28000.1| transcriptional regulator [Lactobacillus crispatus MV-1A-US]
 gi|260572297|gb|EEX28860.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290921907|gb|EFD98919.1| SIS domain protein [Lactobacillus crispatus 214-1]
          Length = 279

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 72/159 (45%), Gaps = 3/159 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +       Q    ++ IK+ K RV   GIG SG+   +    L   G  +F    + 
Sbjct: 103 LSETQNKLDIKQLKKIIQLIKSAK-RVYFYGIGSSGYTSLEATQRLLRMGISAFAETESN 161

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  +I++DDLII +S +GS+D L   +  A++    ++A+TS + S +A  ADIV 
Sbjct: 162 NMFMTSSIISKDDLIIAISSTGSTDSLVRAIELAKKNKATVVALTSYDNSPLAQLADIV- 220

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +  +  +  +      S    + + D +   LL++  +
Sbjct: 221 -VGVQDTNYINDARFINSQFSIMYVIDVITTLLLKNNKY 258


>gi|203288639|ref|YP_002223546.1| Inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
 gi|201084346|gb|ACH93934.1| Inosine-5'-monophosphate dehydrogenase [Borrelia duttonii Ly]
          Length = 483

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/201 (18%), Positives = 76/201 (37%), Gaps = 16/201 (7%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S++   + I+   + L        +   P  S+ M       +AIA+ +    
Sbjct: 9   ALTFDDVSLIPRKSSILPSDVNLKTRLTRNIYLNIPFLSSAMDTVTESRMAIAVAKEGGI 68

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITILSEKRFGCV 254
                 V+H    +         V     +  +     +     + +A  ++ +     +
Sbjct: 69  G-----VIHKNITIEKQRKEVEIVKSYHRNGIIRNLITINEDTSIKEARRLIVKHNISAL 123

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            V D   K+ G++T  DI        +   V + M K      ED  L+ A ++L +H I
Sbjct: 124 PVTDHAGKILGLVTSRDIKYIAD---DNTPVINAMTKKLITAKEDITLSEAKEILFKHRI 180

Query: 315 SVLMVVDDCQKAIGIVHFLDL 335
             L++VD+     G++   D+
Sbjct: 181 EKLLIVDESNSLRGLITCKDI 201


>gi|89899203|ref|YP_521674.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89343940|gb|ABD68143.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 150

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK---DL 280
           +   + +V+   P +    ++ +   G + VVD  E  +  GI+T+ D+         D 
Sbjct: 9   ATSMVAVVEPETPTLLVAQLMRKHHIGALVVVDTHEKTRPIGIVTDRDLVLELMAEGLDP 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  D+M  +  +   +     A+QL++ H +  L++ DD  + +GIV   D+L  
Sbjct: 69  AVFTAGDIMSVDLVLATPEMDAMDAVQLMKTHRLRRLVITDDKGRLVGIVTMEDVLEL 126



 Score = 43.0 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
           +D       V+  +T   +  QL+R+H+I  L+VVD  +  + IGIV   DL+
Sbjct: 6   KDFATSMVAVVEPETPTLLVAQLMRKHHIGALVVVDTHEKTRPIGIVTDRDLV 58



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + L       +DA+ ++   R   + + D+  +L GI+T  D+     ++
Sbjct: 77  MSVDLVLATPEMDAMDAVQLMKTHRLRRLVITDDKGRLVGIVTMEDVLELLARE 130


>gi|332304984|ref|YP_004432835.1| cyclic nucleotide-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|332172313|gb|AEE21567.1| cyclic nucleotide-binding protein [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 611

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 54/111 (48%), Gaps = 6/111 (5%)

Query: 232 LVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVED 287
           +V       ++  +  +S      + + D  Q L GI+T+ DI  R   +  +  L+V +
Sbjct: 158 VVSEDIKSSILQGVQKMSHSSVSSLVITD-NQALVGILTDRDIRNRVVAQQTDVNLAVSE 216

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLR 337
           +M ++P  I +   L  A+ ++ +HN+  L VVD      +G++   D++R
Sbjct: 217 IMTQDPVKIHDQRTLFDALCVMTEHNVHHLPVVDKNTGVPLGMLTASDMIR 267



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRN 275
                  +     L DA+ +++E     + VVD+      G++T  D+ R+
Sbjct: 218 MTQDPVKIHDQRTLFDALCVMTEHNVHHLPVVDKNTGVPLGMLTASDMIRH 268


>gi|315427107|dbj|BAJ48722.1| hypothetical protein HGMM_F05B08C03 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 296

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V+ G  +I+A  +++E++   + + ++  K  G++TE DI        KD +  SV++VM
Sbjct: 9   VEEGSSVIEAAKVMAERKISGIVITNK-GKPVGLVTERDIVSKVVAAGKDPSRTSVKEVM 67

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K    I  +  L  A+ L+ +  +  L+V  D +  IG+    D+L
Sbjct: 68  SKPLITIDIEATLLEAVDLMNRKKVRRLLVTRDDE-VIGLFTIRDVL 113



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 289 MIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M+K+P   + E + +  A +++ +  IS  +V+ +  K +G+V   D++
Sbjct: 1   MVKSPLISVEEGSSVIEAAKVMAERKISG-IVITNKGKPVGLVTERDIV 48


>gi|240145013|ref|ZP_04743614.1| inosine-5'-monophosphate dehydrogenase [Roseburia intestinalis
           L1-82]
 gi|257202960|gb|EEV01245.1| inosine-5'-monophosphate dehydrogenase [Roseburia intestinalis
           L1-82]
          Length = 484

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAAMDTVTEHRMAIAMARQGGIG-----IIHKNMSIQAQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG KL GIIT  D+   F  D  T  + + 
Sbjct: 96  DPFYLSPDHTLQDAEDLMRKFRISGVPIC-EGGKLVGIITNRDLK--FETDF-TKKISES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   L  A ++L +     L +VD      G++   D+
Sbjct: 152 MTSENLITAPEGITLEEAKKILAKARKEKLPIVDKDFHLKGLITIKDI 199


>gi|253699424|ref|YP_003020613.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M21]
 gi|251774274|gb|ACT16855.1| inosine-5'-monophosphate dehydrogenase [Geobacter sp. M21]
          Length = 489

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L     +      P  SA M        AI +       F   +  V     ++  +  
Sbjct: 30  DLSSRLTNNIQLNIPLVSAAMDTVTESRAAICMAREGGIGFIHKNLTVAEQAMEVDKVKK 89

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S ++    ++   +    + +A+ ++++ R   V +     KL GI+T  D+   F  
Sbjct: 90  SESGMIVDPITM---RPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLR--FET 144

Query: 279 DLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L+ L + D M K N   +   T L  A + L+   +  L+VVD  +   G++   D+ +
Sbjct: 145 NLDLL-ISDRMTKRNLVTVAVGTTLEQAKEHLKHTRVEKLLVVDGDKNLKGLITIKDIEK 203

Query: 338 FG 339
             
Sbjct: 204 IK 205


>gi|149915090|ref|ZP_01903618.1| cyclic nucleotide-binding protein [Roseobacter sp. AzwK-3b]
 gi|149810811|gb|EDM70650.1| cyclic nucleotide-binding protein [Roseobacter sp. AzwK-3b]
          Length = 606

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMI 290
                 + +A   + +KR   + +VDE   ++GI+T  D+  +   ++ +T   V  +M 
Sbjct: 154 CAPETAIREAAARMHDKRISSICIVDEAG-MQGILTVRDMNGKVVAQNADTGAPVSTIMT 212

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +P  +  D L T  + L+ +  I  + +V + +  +GIV   DL R
Sbjct: 213 ASPLTLGPDALGTDVLHLMMERGIGHVPIV-EGKALVGIVTQTDLTR 258



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 32/202 (15%), Positives = 66/202 (32%), Gaps = 15/202 (7%)

Query: 137 FSIPLIAITS--ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            S PL+   +       +   A   L       +   G     +      + D+L I + 
Sbjct: 3   LSAPLVQFLASVHPYDSLERPALDALAAQCVETAYSGGQ----TVFNTGEVVDSLFIVVS 58

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA-ITILSEKRFGC 253
                +++    +               ++    +    +    + DA +  +       
Sbjct: 59  GEIEITDD--AGVQLSLLGPRNSFGERALLREDAAS---RTATAISDATLIRMPSAVL-- 111

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             +++   K+          R   KDL TL VE++M +NP     +T +  A   +    
Sbjct: 112 FELMNASPKVARFFDRRRPARADRKDLTTLRVEELMTRNPLTCAPETAIREAAARMHDKR 171

Query: 314 ISVLMVVDDCQKAIGIVHFLDL 335
           IS + +VD+     GI+   D+
Sbjct: 172 ISSICIVDEAGM-QGILTVRDM 192


>gi|94971756|ref|YP_593804.1| CBS domain-containing protein [Candidatus Koribacter versatilis
           Ellin345]
 gi|94553806|gb|ABF43730.1| CBS domain containing membrane protein [Candidatus Koribacter
           versatilis Ellin345]
          Length = 145

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNT 282
              S   V I   + DAIT++ ++  G VAVV+E   + G+ +E D+ R F    +   +
Sbjct: 7   CDQSPAFVSINASVADAITMMIDRHAGAVAVVEENHVVAGMFSERDVMRKFALSGRSAES 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V + M +   +   +T    A+Q++ +     L +VD   K +G++    +L  
Sbjct: 67  TPVREYMSQYVVMGSPETTPAEALQVMIESRHRHLPIVDSDGKLLGVISIRHVLEA 122



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 44/129 (34%), Gaps = 6/129 (4%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL---HPGGKLGT 215
           +L L  +  +     A    AI  +    A A+A++E  +     F            G 
Sbjct: 3   ILKLCDQSPAFVSINASVADAITMMIDRHAGAVAVVEENHVVAGMFSERDVMRKFALSGR 62

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                    +    + +        +A+ ++ E R   + +VD   KL G+I+   I   
Sbjct: 63  SAESTPVREYMSQYVVMGSPETTPAEALQVMIESRHRHLPIVDSDGKLLGVIS---IRHV 119

Query: 276 FHKDLNTLS 284
               ++ L+
Sbjct: 120 LEAQVDLLT 128


>gi|301022066|ref|ZP_07185993.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331643184|ref|ZP_08344319.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
 gi|331678556|ref|ZP_08379231.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
 gi|332278283|ref|ZP_08390696.1| conserved hypothetical protein [Shigella sp. D9]
 gi|12516974|gb|AAG57675.1|AE005486_6 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|987639|dbj|BAA10911.1| unnamed protein product [Escherichia coli K-12]
 gi|1033150|gb|AAA79823.1| alternate name yfhH [Escherichia coli str. K-12 substr. MG1655]
 gi|13362898|dbj|BAB36850.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|73856561|gb|AAZ89268.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|81246424|gb|ABB67132.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|209762938|gb|ACI79781.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762940|gb|ACI79782.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762942|gb|ACI79783.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762944|gb|ACI79784.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|209762946|gb|ACI79785.1| hypothetical protein ECs3427 [Escherichia coli]
 gi|299881371|gb|EFI89582.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331039982|gb|EGI12202.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
 gi|331075016|gb|EGI46336.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
 gi|332100635|gb|EGJ03981.1| conserved hypothetical protein [Shigella sp. D9]
          Length = 306

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|294498144|ref|YP_003561844.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
 gi|295703495|ref|YP_003596570.1| CBS domain-containing protein [Bacillus megaterium DSM 319]
 gi|294348081|gb|ADE68410.1| CBS domain protein [Bacillus megaterium QM B1551]
 gi|294801154|gb|ADF38220.1| CBS domain protein [Bacillus megaterium DSM 319]
          Length = 139

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           + +    + E   G + +VD   +L G+IT+ D+       K  N+  V DVM +    I
Sbjct: 21  VYEVAVKMKEWNVGAIPIVDRD-QLVGMITDRDLVIKGIAEKKPNSSKVTDVMSEELITI 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  +  A +L+ QH I  L VV + QK +GIV   DL
Sbjct: 80  TAEASVEEASKLMAQHQIRRLPVV-ENQKLVGIVSLGDL 117



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V++VM  + +       +      +++ N+  + +VD  Q  +G++   DL+  GI
Sbjct: 2   KTVQEVMTADTETCTTLDNVYEVAVKMKEWNVGAIPIVDRDQ-LVGMITDRDLVIKGI 58


>gi|168002427|ref|XP_001753915.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694891|gb|EDQ81237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 525

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R     + D    L GIIT+ DI  R   + L    +SV  VM
Sbjct: 40  IPDGTTVADACRRMATRRVTAALLTDSNALLCGIITDQDISTRVIAEGLKPEEISVSKVM 99

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  ++ DTL   A+Q + Q     L VV+D +    ++  LD+ +
Sbjct: 100 TRNPVFVMGDTLAVEALQTMVQGKFRHLPVVEDGE----VIALLDITK 143



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 43/274 (15%), Positives = 90/274 (32%), Gaps = 19/274 (6%)

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G   +     +A+    +  +  + A     G+IT  D+   +   G   E  ++     
Sbjct: 43  GTTVADACRRMATRRVTAALLTDSNALL--CGIITDQDISTRVIAEGLKPEEISVSKVMT 100

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI--------GD 187
           R  + ++  T   +++          LP   +     L   T  +             G+
Sbjct: 101 RNPVFVMGDTLAVEALQTMVQGKFRHLPVVEDGEVIALLDITKCLYDAIARVEGAAEKGN 160

Query: 188 ALAIALL---ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           A+A A+       +   +D        +          ++  G  +        +  A  
Sbjct: 161 AIAAAIESVEREWSVKGSDKSNFVENLRDRMFKPTLRSLIAEGTKVATCSSSETVTTATK 220

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVMIKNPKVILEDTL 301
            + + R   V V    +K +GI+T  D + +   + L   + +++ VM  NP+    DT 
Sbjct: 221 KMRDLRMSSVIVTSSSRKPRGILTSKDVLMKVIAQGLPPESTTLDKVMTPNPECAGLDTT 280

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIG---IVHF 332
           L  A+  +       L V D     +    ++H 
Sbjct: 281 LVDALHAMHDRKFLHLPVTDSDGSVVACVDVLHL 314



 Score = 36.0 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 7/41 (17%), Positives = 17/41 (41%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            I + T +  A + +    ++  ++ D      GI+   D+
Sbjct: 39  TIPDGTTVADACRRMATRRVTAALLTDSNALLCGIITDQDI 79


>gi|86360152|ref|YP_472041.1| hypothetical protein RHE_PC00107 [Rhizobium etli CFN 42]
 gi|86284254|gb|ABC93314.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 240

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 51/137 (37%), Gaps = 25/137 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  V     + +A  ++ + R   + VV     L GI++EGD  R           
Sbjct: 7   MTSPAITVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLRRSELSTERKRS 66

Query: 275 NFHKDL-------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              + L             +   VE+VM      I     L+ A++L+ +  I  L VV 
Sbjct: 67  WLLEWLTSSGRIAAEYVRTHGRRVEEVMTAPVSAIAPTASLSDAVRLMERQEIKRLPVV- 125

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +GIV   DLLR 
Sbjct: 126 EGGRLVGIVARSDLLRA 142



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 23/53 (43%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+ +M      +     +  A +L+  + IS L VV      +GIV   D LR
Sbjct: 3   VQAIMTSPAITVTASASVAEAARLMLDNRISGLPVVGANGALVGIVSEGDFLR 55



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + T      +VM +  S   +     L DA+ ++  +    + VV EG +L GI+   D+
Sbjct: 83  VRTHGRRVEEVMTAPVSA--IAPTASLSDAVRLMERQEIKRLPVV-EGGRLVGIVARSDL 139

Query: 273 FRNFHKDLNTLS 284
            R   + L   S
Sbjct: 140 LRALSQALPATS 151


>gi|319638458|ref|ZP_07993220.1| inosine-5'-monophosphate dehydrogenase [Neisseria mucosa C102]
 gi|317400207|gb|EFV80866.1| inosine-5'-monophosphate dehydrogenase [Neisseria mucosa C102]
          Length = 487

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPELQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + D + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTALIRDVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +++  H +  ++V++D  +  G++   D+L+
Sbjct: 152 IMTPRNRLVTVPEGTSIDEAREIMHAHKVERVLVLNDQDELKGLITVKDILK 203


>gi|300716740|ref|YP_003741543.1| HTH-type transcriptional regulator RpiR [Erwinia billingiae Eb661]
 gi|299062576|emb|CAX59695.1| HTH-type transcriptional regulator RpiR [Erwinia billingiae Eb661]
          Length = 285

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 6/173 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S+ Q   +      + +    S L      +F+ A + I   +  + +  +G S  +  
Sbjct: 94  DSSEQLLAKVFRTSIQAIEETLSILD---ISEFNRAADIIFKAR-HIDLYAVGGSAAVAR 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L+  +   G  S     A        +++ DD++I +S SG++  +   +  A R    
Sbjct: 150 DLSHKMLKIGIKSSAYDDAHIMLMSAAVLSDDDVVIAISHSGATRAVNDPVKLAARNGAK 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +IAIT+  +S +A  A +VL    +        A   S I QL I DAL +A+
Sbjct: 210 VIAITNYAESPIARSAHVVLNSTSQGSHLLGENA--ASRIAQLNILDALFVAI 260


>gi|121635093|ref|YP_975338.1| putative transcriptional regulator [Neisseria meningitidis FAM18]
 gi|120866799|emb|CAM10554.1| putative transcriptional regulator [Neisseria meningitidis FAM18]
          Length = 294

 Score = 84.2 bits (207), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 40/185 (21%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
              + +    +  A  S++ E+R L             +   A+  +   + RV   G+G
Sbjct: 100 DDMASVVEKVLGNAAASLLGERRFLKE----------SELENAIATLMHAR-RVEFYGVG 148

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG +           G  +              +++  D+++ +S +GSS EL   +  
Sbjct: 149 NSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSIELLDAVSI 208

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +IA+T    S +A  AD VL      +       P  S ++QLA+ D LAI L
Sbjct: 209 AKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAVIDILAIGL 265

Query: 194 LESRN 198
                
Sbjct: 266 ALRLG 270


>gi|332534581|ref|ZP_08410416.1| putative signal-transduction protein containing cAMP-binding and
           CBS domain [Pseudoalteromonas haloplanktis ANT/505]
 gi|332036001|gb|EGI72480.1| putative signal-transduction protein containing cAMP-binding and
           CBS domain [Pseudoalteromonas haloplanktis ANT/505]
          Length = 631

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/147 (18%), Positives = 57/147 (38%), Gaps = 16/147 (10%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD------ 258
            ++               ++H       V     + D   +++E+    V V D      
Sbjct: 137 AIVEQADGNDLTTAKVKSLIHRDVVT--VDATSTIQDIAKLMTEEAVSSVLVTDVNKPIN 194

Query: 259 -----EGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                +  ++ GIIT+ D+  +   K L       D+M  N  ++  +  +  A+  + +
Sbjct: 195 DDPEEDDGQVVGIITDRDLRTKVVAKGLAFNTQANDIMSTNLVLLDANDYIFEAVLAMLR 254

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N+  L VV   ++ IG++   D+LR+
Sbjct: 255 DNLHHLPVV-QKRRPIGVISLSDILRY 280


>gi|313889535|ref|ZP_07823181.1| inosine-5'-monophosphate dehydrogenase [Streptococcus
           pseudoporcinus SPIN 20026]
 gi|313122147|gb|EFR45240.1| inosine-5'-monophosphate dehydrogenase [Streptococcus
           pseudoporcinus SPIN 20026]
          Length = 493

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 64/170 (37%), Gaps = 15/170 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIISAAMDTVTDSRMAIAIARAGGLG-----VIHKNMSIIEQAEEVRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     +  A  ++   R   V +V+  E ++L GIIT  D+      D     + 
Sbjct: 100 DPFFLTPNHKVAQAEELMQRYRISGVPIVETMENRRLVGIITNRDMRFISDYD---SPIS 156

Query: 287 DVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + M  +        T LT A Q+L QH I  L ++DD  +  G++   D+
Sbjct: 157 EHMTSEKLVTAEVGTDLTTAEQILHQHRIEKLPLIDDSGRLSGLITIKDI 206


>gi|70607246|ref|YP_256116.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68567894|gb|AAY80823.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 300

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L DA  IL ++      V+D   K  GI+T  DI + F +      V D M  N 
Sbjct: 186 KPENTLRDASQILYKEGIRGAPVLDNEGKNLGILTTADIIKAFFEQRYDAKVSDYMKTNV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I ED  +  A++ +  +N+  L+V++  Q+ IGIV   D+L+   G+
Sbjct: 246 ISISEDDDVLTAIKKMLIYNVGRLLVLNKDQRVIGIVTRTDILKTIAGL 294



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 40/84 (47%), Gaps = 9/84 (10%)

Query: 263 LKGII--TEGDIFRNFHKD------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           ++G+I  T+ D  +    D      +  + V+++M K    +  +  L  A Q+L +  I
Sbjct: 145 IEGVIIHTD-DERKELVIDVTRMVSIPKVQVKNIMGKRLVALKPENTLRDASQILYKEGI 203

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
               V+D+  K +GI+   D+++ 
Sbjct: 204 RGAPVLDNEGKNLGILTTADIIKA 227


>gi|154151770|ref|YP_001405388.1| signal-transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|154000322|gb|ABS56745.1| putative signal-transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 188

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                         +  ++ I   +  A   +  +  G V ++ E  +  GI+TE DI  
Sbjct: 9   RFETRVPLSDVMKRNPIMISIEANVAKAAKAMCREEVGSVIIL-ERNEPIGIVTEEDINC 67

Query: 274 RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   KDL  +++ V  +M      +  D  +  A Q++ +H +  L VVD   K IGIV 
Sbjct: 68  KVVAKDLKPSSVQVNTIMSTPLITVSADKTVVDAAQMMVKHRVRRLPVVDKAGKVIGIVT 127

Query: 332 FLDLL 336
             DLL
Sbjct: 128 VRDLL 132



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 28/65 (43%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +  V     ++DA  ++ + R   + VVD+  K+ GI+T  D+   F++ 
Sbjct: 79  VQVNTIMSTPLITVSADKTVVDAAQMMVKHRVRRLPVVDKAGKVIGIVTVRDLLTTFNEQ 138

Query: 280 LNTLS 284
              L+
Sbjct: 139 NELLT 143


>gi|331664128|ref|ZP_08365038.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA143]
 gi|331059927|gb|EGI31904.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA143]
          Length = 306

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|255021403|ref|ZP_05293451.1| Inosine-5'-monophosphate dehydrogenase [Acidithiobacillus caldus
           ATCC 51756]
 gi|254969266|gb|EET26780.1| Inosine-5'-monophosphate dehydrogenase [Acidithiobacillus caldus
           ATCC 51756]
          Length = 488

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      A+AI + +         +         +  +    + V+    + 
Sbjct: 40  NVPLVSAAMDTVTDAAMAICMAQEGGIGIIHKNMTAEEQAAAVRRVKKFEAGVIKDPITT 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              K    + + + ++++     V VVD G +L+GI+T  D+     +      V  VM 
Sbjct: 100 ---KADVSIREVLLLMAQHGISGVPVVD-GNRLEGIVTHRDLRF---ETRMEAPVRSVMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L     LL QH I  ++VV+D  +  G++   D+ + 
Sbjct: 153 PRERLVTVPEGTSLEATKALLHQHRIEKILVVNDQFELRGLITVKDIRKA 202


>gi|255538678|ref|XP_002510404.1| conserved hypothetical protein [Ricinus communis]
 gi|223551105|gb|EEF52591.1| conserved hypothetical protein [Ricinus communis]
          Length = 205

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNF---HKDLNTLSVED 287
                  + DA+  ++E   G + V+  G+K L GIITE D  R      +  +   V +
Sbjct: 74  WCHSNDTVYDAVKNMAENNIGSLLVLKPGEKHLAGIITERDYLRKVIAEGRSCHYTRVAE 133

Query: 288 VMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M        +  DT +  AMQL+  H+I  + V+D   + +G++  +D++R 
Sbjct: 134 IMTDENRLVTVTSDTTILRAMQLMTDHHIRHVPVID--GRIVGMISMVDVVRA 184



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+            +   +++M   + +  V     ++ A+ ++++     V V+D
Sbjct: 110 ITERDYLRKVIAEGRSCHYTRVAEIMTDENRLVTVTSDTTILRAMQLMTDHHIRHVPVID 169

Query: 259 EGQKLKGIITEGDIFRNF 276
              ++ G+I+  D+ R  
Sbjct: 170 --GRIVGMISMVDVVRAV 185


>gi|49480271|ref|YP_035075.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|206975585|ref|ZP_03236497.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           H3081.97]
 gi|217958411|ref|YP_002336959.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH187]
 gi|228913510|ref|ZP_04077139.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|229137628|ref|ZP_04266234.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST26]
 gi|301052470|ref|YP_003790681.1| RpiR family transcriptional regulator [Bacillus anthracis CI]
 gi|49331827|gb|AAT62473.1| transcriptional regulator, RpiR family [Bacillus thuringiensis
           serovar konkukian str. 97-27]
 gi|206746047|gb|EDZ57442.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           H3081.97]
 gi|217066208|gb|ACJ80458.1| putative transcriptional regulator, RpiR family [Bacillus cereus
           AH187]
 gi|228645854|gb|EEL02082.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST26]
 gi|228846097|gb|EEM91119.1| Transcriptional regulator, RpiR [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300374639|gb|ADK03543.1| transcriptional regulator, RpiR family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 287

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADHIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|171184891|ref|YP_001793810.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934103|gb|ACB39364.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 130

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 50/115 (43%), Gaps = 3/115 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDL-NTL 283
                +      L++    L+    G + VV+     K  GIITE D+ R     +  + 
Sbjct: 13  KKEPIVALPTETLVEVAEKLATNNIGALVVVNPQNTKKPVGIITERDVVRAISMHMPLST 72

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE     +   I ED  +  A +L+ ++NI  L+VV+   +  G+V   D+LR 
Sbjct: 73  PVEAFASTDLITIDEDEPVGKAAELMLKYNIRHLIVVNKFGELRGVVSIRDVLRA 127



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
           V D++ K P V L    L    + L  +NI  L+VV+  + +K +GI+   D++R 
Sbjct: 8   VADLVKKEPIVALPTETLVEVAEKLATNNIGALVVVNPQNTKKPVGIITERDVVRA 63


>gi|117624782|ref|YP_853695.1| putative DNA-binding transcriptional regulator [Escherichia coli
           APEC O1]
 gi|237705070|ref|ZP_04535551.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|91073460|gb|ABE08341.1| hypothetical protein UTI89_C2881 [Escherichia coli UTI89]
 gi|115513906|gb|ABJ01981.1| conserved hypothetical protein [Escherichia coli APEC O1]
 gi|226901436|gb|EEH87695.1| conserved hypothetical protein [Escherichia sp. 3_2_53FAA]
 gi|323949215|gb|EGB45106.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H252]
          Length = 306

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNTEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|297612744|ref|NP_001066263.2| Os12g0169400 [Oryza sativa Japonica Group]
 gi|77553133|gb|ABA95929.1| CBS domain-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
 gi|255670087|dbj|BAF29282.2| Os12g0169400 [Oryza sativa Japonica Group]
          Length = 542

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PG   G   V    +  +      +  G  + +A   ++ +R   V + D    L GI+T
Sbjct: 47  PGQLTGERTVRKLRLSKALT----IPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVT 102

Query: 269 EGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           + D+  R   + L      +  +M +NP   + DTL   A+Q + Q     L VV++ + 
Sbjct: 103 DKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGE- 161

Query: 326 AIGIVHFLDLLR 337
              ++  LD+ +
Sbjct: 162 ---VIAMLDIAK 170



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD 279
           S ++  G  + +V    P+  A   + E R   V VV  G  L+GI T  D+  R   ++
Sbjct: 224 STIVTEGTKVAIVSPSDPVYVATQKMREFRVNSV-VVATGNTLQGIFTSKDLLMRVVAQN 282

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+     VE VM  NP     DT +  A+ ++       + V+D   +    +  L L  
Sbjct: 283 LSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTH 342

Query: 338 FGI 340
             I
Sbjct: 343 AAI 345


>gi|218186500|gb|EEC68927.1| hypothetical protein OsI_37618 [Oryza sativa Indica Group]
          Length = 543

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PG   G   V    +  +      +  G  + +A   ++ +R   V + D    L GI+T
Sbjct: 47  PGQLTGERTVRKLRLSKALT----IPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVT 102

Query: 269 EGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           + D+  R   + L      +  +M +NP   + DTL   A+Q + Q     L VV++ + 
Sbjct: 103 DKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGE- 161

Query: 326 AIGIVHFLDLLR 337
              ++  LD+ +
Sbjct: 162 ---VIAMLDIAK 170



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD 279
           S ++  G  + +V    P+  A   + E R   V VV  G  L+GI T  D+  R   ++
Sbjct: 224 SSIVTEGTKVAIVSPSDPVYVATQKMREFRVNSV-VVATGNTLQGIFTSKDLLMRVVAQN 282

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+     VE VM  NP     DT +  A+ ++       + V+D   +    +  L L  
Sbjct: 283 LSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTH 342

Query: 338 FGI 340
             I
Sbjct: 343 AAI 345


>gi|108802060|ref|YP_642257.1| signal-transduction protein [Mycobacterium sp. MCS]
 gi|119871212|ref|YP_941164.1| signal-transduction protein [Mycobacterium sp. KMS]
 gi|126438039|ref|YP_001073730.1| signal-transduction protein [Mycobacterium sp. JLS]
 gi|108772479|gb|ABG11201.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. MCS]
 gi|119697301|gb|ABL94374.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. KMS]
 gi|126237839|gb|ABO01240.1| putative signal-transduction protein with CBS domains
           [Mycobacterium sp. JLS]
          Length = 189

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 50/120 (41%), Gaps = 2/120 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               V      +  V+   PL +  ++L++  +  + VVDE   L G++T GD  R    
Sbjct: 1   MVCAVDVMSRPVVSVQSSTPLRETGSLLADYGYAGIPVVDEDGVLLGMVTSGDALRA--D 58

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +   VM      +     L    +LL Q  I  + VVDD  + +G+V   DLLR 
Sbjct: 59  PARHHTAGAVMTTPAVAVDASADLDEVGRLLLQRGIRSVPVVDDECRVLGVVSRGDLLRL 118


>gi|84685642|ref|ZP_01013539.1| CBS domain protein [Maritimibacter alkaliphilus HTCC2654]
 gi|84666308|gb|EAQ12781.1| CBS domain protein [Rhodobacterales bacterium HTCC2654]
          Length = 173

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           +     L DA+ +L + R G +  VDE  KL GI++E DI R             VE+VM
Sbjct: 48  IHPEQTLHDAVVLLRDNRIGALLCVDEEGKLAGILSERDIVRKLADQPGKTLPHRVEEVM 107

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +    D  L V ++L+ +     + VVD     IG++   D++ F +
Sbjct: 108 TRTVETCTADEPLVVVLRLMTEGRFRHMPVVDGD-ALIGMITIGDVVHFRL 157



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I  +  L  A+ LLR + I  L+ VD+  K  GI+   D++R 
Sbjct: 46  ITIHPEQTLHDAVVLLRDNRIGALLCVDEEGKLAGILSERDIVRK 90


>gi|261495718|ref|ZP_05992162.1| IMP dehydrogenase [Mannheimia haemolytica serotype A2 str. OVINE]
 gi|261308630|gb|EEY09889.1| IMP dehydrogenase [Mannheimia haemolytica serotype A2 str. OVINE]
          Length = 465

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 19  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 75

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +   ++ +  F    V+DE Q L GIIT  D    F  DL+  +V + M 
Sbjct: 76  VTISPDMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTR--FVTDLSK-TVREFMT 132

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+        L+ +H +  ++VV++  +  G++   D  + 
Sbjct: 133 PKDRLVTVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKA 182


>gi|222094570|ref|YP_002528630.1| transcriptional regulator, rpir family [Bacillus cereus Q1]
 gi|221238628|gb|ACM11338.1| transcriptional regulator, RpiR family [Bacillus cereus Q1]
          Length = 262

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 84  AAIEASVTAIDKKELEKAADHIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 142

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 143 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIAITKLDQSSPLYKEAD 202

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 203 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 241


>gi|254514040|ref|ZP_05126101.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
 gi|219676283|gb|EED32648.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR5-3]
          Length = 621

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS-VEDVMI 290
           V     +  A   ++E+R     V+ EG++L GI+T+ D+  R     LN  + V DVM 
Sbjct: 168 VSPELTVQQAARAMAERRVSSTFVL-EGEELLGILTDRDLRTRVLAAGLNNQTLVRDVMT 226

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            NP+ I     L     L+ Q +   L V+ +  +  G+V   DL+
Sbjct: 227 PNPESISAQESLFATTLLMTQRSFHHLPVL-EDGRLAGVVTTSDLI 271



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/68 (17%), Positives = 29/68 (42%), Gaps = 5/68 (7%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL- 335
             +     V  VM ++   +  +  +  A + + +  +S   V+ + ++ +GI+   DL 
Sbjct: 149 EPNAMLAPVSSVMTRDILTVSPELTVQQAARAMAERRVSSTFVL-EGEELLGILTDRDLR 207

Query: 336 ---LRFGI 340
              L  G+
Sbjct: 208 TRVLAAGL 215


>gi|222616703|gb|EEE52835.1| hypothetical protein OsJ_35364 [Oryza sativa Japonica Group]
          Length = 543

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PG   G   V    +  +      +  G  + +A   ++ +R   V + D    L GI+T
Sbjct: 47  PGQLTGERTVRKLRLSKALT----IPEGTTVSEACRRMAARRVDAVLLTDAQGLLSGIVT 102

Query: 269 EGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           + D+  R   + L      +  +M +NP   + DTL   A+Q + Q     L VV++ + 
Sbjct: 103 DKDVATRVVAEGLRVEQTIMSKIMTRNPTYAMSDTLAIEALQKMVQGKFRHLPVVENGE- 161

Query: 326 AIGIVHFLDLLR 337
              ++  LD+ +
Sbjct: 162 ---VIAMLDIAK 170



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD 279
           S ++  G  + +V    P+  A   + E R   V VV  G  L+GI T  D+  R   ++
Sbjct: 224 STIVTEGTKVAIVSPSDPVYVATQKMREFRVNSV-VVATGNTLQGIFTSKDLLMRVVAQN 282

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+     VE VM  NP     DT +  A+ ++       + V+D   +    +  L L  
Sbjct: 283 LSPELTLVEKVMTVNPDFATLDTTILDALHIMHDGKFLHIPVLDREGQIAACLDVLQLTH 342

Query: 338 FGI 340
             I
Sbjct: 343 AAI 345


>gi|254360805|ref|ZP_04976952.1| IMP dehydrogenase [Mannheimia haemolytica PHL213]
 gi|153092279|gb|EDN73348.1| IMP dehydrogenase [Mannheimia haemolytica PHL213]
          Length = 487

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +   ++ +  F    V+DE Q L GIIT  D    F  DL+  +V + M 
Sbjct: 98  VTISPDMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTR--FVTDLSK-TVREFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+        L+ +H +  ++VV++  +  G++   D  + 
Sbjct: 155 PKDRLVTVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKA 204


>gi|294497648|ref|YP_003561348.1| RpiR family transcriptional regulator [Bacillus megaterium QM
           B1551]
 gi|294347585|gb|ADE67914.1| transcriptional regulator, RpiR family [Bacillus megaterium QM
           B1551]
          Length = 284

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 73/174 (41%), Gaps = 4/174 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N T+Q  ++        + SL  + +     +   AV  +   K  +   GIG S  I 
Sbjct: 89  TNETIQSIVK--KTASNSIQSLSDTAELVNYKEAERAVLALVEAKN-IHFFGIGASHIIA 145

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                        +     +  +   +   ++DD+++ +S+SG + E+  +L  A+   +
Sbjct: 146 IDAQQKFLRINKNATAFADSHLAATLIANASKDDVVVGISFSGETPEVSNVLSLAKNRGV 205

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I++T   +S V+  ADI L      +  P   A T+S + QL + D L +++
Sbjct: 206 KTISLTKYGQSTVSSLADICLYTS-CSQEAPFRSAATSSRLAQLYVIDVLFLSI 258


>gi|261492560|ref|ZP_05989113.1| IMP dehydrogenase [Mannheimia haemolytica serotype A2 str. BOVINE]
 gi|261311719|gb|EEY12869.1| IMP dehydrogenase [Mannheimia haemolytica serotype A2 str. BOVINE]
          Length = 487

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     L +   ++ +  F    V+DE Q L GIIT  D    F  DL+  +V + M 
Sbjct: 98  VTISPDMTLAELAELVKKNGFAGYPVIDENQNLVGIITGRDTR--FVTDLSK-TVREFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E+        L+ +H +  ++VV++  +  G++   D  + 
Sbjct: 155 PKDRLVTVKENASREEIFHLMHEHRVEKVLVVNNEFQLKGMITLKDYQKA 204


>gi|73538224|ref|YP_298591.1| CBS [Ralstonia eutropha JMP134]
 gi|72121561|gb|AAZ63747.1| CBS [Ralstonia eutropha JMP134]
          Length = 164

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              +   +   C L +A  ++ +   G + V  +  +L+G++T+ DI  R      +   
Sbjct: 29  MTPNPQYITPDCTLQEAAKLMDDLNVGTLPVCVD-GQLRGMVTDRDITCRCIAVGKDPQT 87

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + D M + P    +D  +  A+  + +  I  + V+D   + +GIV   D+
Sbjct: 88  RIVDAMSERPLWCRDDDTIDDALAKMAERQIRRVPVIDKDDRLVGIVSLGDI 139



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R      ++L + DVM  NP+ I  D  L  A +L+   N+  L V     +  G+V  
Sbjct: 13  RRQAATPTSSLRLRDVMTPNPQYITPDCTLQEAAKLMDDLNVGTLPVC-VDGQLRGMVTD 71

Query: 333 LDLL 336
            D+ 
Sbjct: 72  RDIT 75


>gi|294341333|emb|CAZ89748.1| Conserved hypothetical protein; putative CBS
           (cystathionine-beta-synthase) domain [Thiomonas sp. 3As]
          Length = 159

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 56/139 (40%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL---- 280
              +   +    P+ +   IL E R   V V D G  L GI+TEGD+  R   + L    
Sbjct: 7   MTPNPIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLVHRAADERLEPRE 66

Query: 281 ----------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                    + E VM +    +  D+ +TVA +LL  HNI  L 
Sbjct: 67  SLWKENFYRSVFRRHTPEPDKAEGRTAEQVMTREVLTVAPDSNVTVAARLLADHNIKSLP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V++   + +G++   DL++
Sbjct: 127 VIEHE-RLVGMISRFDLVK 144



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D+M  NP  I  +T +    ++L +H I+ + V D     +GIV   DL+
Sbjct: 1   MKVRDLMTPNPIRIAPETPVAEIARILIEHRINGVPVTDAGGHLLGIVTEGDLV 54


>gi|225438337|ref|XP_002272502.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 539

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   ++L      V  +M
Sbjct: 64  IPEGTTVSDACRRMAARRVDAVLLTDSNALLSGIVTDKDIATRVIAEELRPEQTVVSKIM 123

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +  D+L   A++ + Q     L VV++ +    ++  LD+ +
Sbjct: 124 TRHPIFVNSDSLAIEALEKMVQGKFRHLPVVENGE----VIAILDITK 167



 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +V    P+  A   + E R   V ++  G K++GI+T  D + R   ++
Sbjct: 221 STIIAENTKVAIVSPSDPISVAAKKMREYRVNSVIIM-TGSKIQGILTSKDILMRVVAQN 279

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L+     VE VM  NP+    +T +  A+ ++       L VVD   
Sbjct: 280 LSPELTLVEKVMTPNPECATLETTILDALHIMHDGKFLHLPVVDKDG 326


>gi|157156947|ref|YP_001463883.1| putative DNA-binding transcriptional regulator [Escherichia coli
           E24377A]
 gi|191167960|ref|ZP_03029762.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
 gi|193064074|ref|ZP_03045159.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|193068304|ref|ZP_03049267.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|194427291|ref|ZP_03059841.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|260845191|ref|YP_003222969.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|309794386|ref|ZP_07688809.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|157078977|gb|ABV18685.1| transcriptional regulator, RpiR family [Escherichia coli E24377A]
 gi|190901967|gb|EDV61714.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
 gi|192929309|gb|EDV82918.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|192958256|gb|EDV88696.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|194414612|gb|EDX30884.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|195183134|dbj|BAG66681.1| putative transcriptional regulator [Escherichia coli O111:H-]
 gi|257760338|dbj|BAI31835.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|308121842|gb|EFO59104.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|323159239|gb|EFZ45228.1| hypothetical protein ECE128010_4494 [Escherichia coli E128010]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|212639686|ref|YP_002316206.1| CBS domain-containing protein [Anoxybacillus flavithermus WK1]
 gi|212561166|gb|ACJ34221.1| CBS domain protein [Anoxybacillus flavithermus WK1]
          Length = 140

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT 282
                +        + +A   + +   G + + D G +L GI+T+ D+       K   +
Sbjct: 9   MMTTEVECCTPLDNMYEAAVKMRDYNVGAIPITD-GNRLIGIVTDRDLVIRGIAEKKPGS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V +VM +    I  D  +  A +L+ +H I  L VV +    IG++   DL
Sbjct: 68  TAVTEVMSEQLVTISPDASVEEATRLMAKHQIRRLPVV-EGDTLIGMMSLGDL 119



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 28/61 (45%), Gaps = 1/61 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +N   V+++M    +       +  A   +R +N+  + + D   + IGIV   DL+  G
Sbjct: 1   MNMPKVKEMMTTEVECCTPLDNMYEAAVKMRDYNVGAIPITD-GNRLIGIVTDRDLVIRG 59

Query: 340 I 340
           I
Sbjct: 60  I 60


>gi|170701652|ref|ZP_02892595.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           IOP40-10]
 gi|170133441|gb|EDT01826.1| transcriptional regulator, RpiR family [Burkholderia ambifaria
           IOP40-10]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|138894625|ref|YP_001125078.1| inosine-5'-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|196247766|ref|ZP_03146468.1| putative signal-transduction protein with CBS domains [Geobacillus
           sp. G11MC16]
 gi|134266138|gb|ABO66333.1| Inosine-5'-monophosphate dehydrogenase related protein [Geobacillus
           thermodenitrificans NG80-2]
 gi|196212550|gb|EDY07307.1| putative signal-transduction protein with CBS domains [Geobacillus
           sp. G11MC16]
          Length = 141

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +    + E   G + +VD+   L G+IT+ D+       K   + 
Sbjct: 8   MSTDIQYCTPLDNIYEVAVKMREFDVGAIPIVDD-GHLVGMITDRDLVVRGIAEKHPGST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V +VM ++   +  D  +  A  ++ +H I  L VV +  + +GIV   DL
Sbjct: 67  AVTEVMSRDLVTLSPDDSVQKAADMMARHQIRRLPVV-ENGRLVGIVALGDL 117



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V DVM  + +       +      +R+ ++  + +VDD    +G++   DL+  GI
Sbjct: 2   QTVRDVMSTDIQYCTPLDNIYEVAVKMREFDVGAIPIVDD-GHLVGMITDRDLVVRGI 58


>gi|315634471|ref|ZP_07889756.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter segnis ATCC
           33393]
 gi|315476698|gb|EFU67445.1| inosine-5'-monophosphate dehydrogenase [Aggregatibacter segnis ATCC
           33393]
          Length = 509

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 64/182 (35%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M       LAI+L +     F   +  +     ++  +  
Sbjct: 51  NLSTQLTSTIRLNIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQVDRVRKVKK 110

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   I  +  F    VVD    L GIIT  D    F  
Sbjct: 111 FESGVV---SDPITVTPTLTISELKAIAQKNGFAGYPVVDAEGNLVGIITGRDTR--FIS 165

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DLN  +V D M          E        QL+ +H +  +++VDD  K  G++   D  
Sbjct: 166 DLNK-TVADFMTPKSRLVTAKEGAKREEIFQLMHEHRVEKVLIVDDNFKLKGMITLKDYQ 224

Query: 337 RF 338
           + 
Sbjct: 225 KA 226


>gi|261380248|ref|ZP_05984821.1| inosine-5'-monophosphate dehydrogenase [Neisseria subflava NJ9703]
 gi|284797106|gb|EFC52453.1| inosine-5'-monophosphate dehydrogenase [Neisseria subflava NJ9703]
          Length = 487

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPELQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + D + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPITVAPTALIRDVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +++  H +  ++V++D  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEAREIMHAHKVERVLVLNDQDELKGLITVKDILK 203


>gi|149915200|ref|ZP_01903728.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. AzwK-3b]
 gi|149810921|gb|EDM70760.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. AzwK-3b]
          Length = 482

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESGMAICMAQTGGMGVIHRNLTVEEQAREVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +          VVD+  ++ GI+T  D+      D +   V  +M 
Sbjct: 99  T---PDQTLADAKALQERYNVTGFPVVDDKGRVVGIVTNRDMRFA---DRDDTPVRVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   IL++      A  L++   I  L+V D   K  G++   D
Sbjct: 153 SDNLAILQEPADREEAKSLMKARRIEKLLVTDGDGKLTGLLTLRD 197



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++N++   VVDD  + +GIV   D+
Sbjct: 94  NPITLTPDQTLADAKALQERYNVTGFPVVDDKGRVVGIVTNRDM 137


>gi|146303065|ref|YP_001190381.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701315|gb|ABP94457.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 141

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 56/108 (51%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI- 290
           V+ G P+I A+ +++    G V +  +  KL GIITE D+ R   + ++    VE+    
Sbjct: 16  VERGTPVIKAVELMASHNMGSVIIT-KDGKLAGIITERDVIRGIARGISLNQPVEEFGTM 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+   + ED  +  A++ + + N+  L+VVD      G++   D++R 
Sbjct: 75  KDLVTVREDDTVYTAVKKMAERNLRHLIVVDRDGNLKGVISVRDIIRE 122



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   +  V+    +  A+  ++E+    + VVD    LKG+I+  DI R  H
Sbjct: 73  TMKDLVTVREDDTVYTAVKKMAERNLRHLIVVDRDGNLKGVISVRDIIRESH 124



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+ ++ KNP  +   T +  A++L+  HN+  +++     K  GI+   D++R
Sbjct: 5   VKHLISKNPVSVERGTPVIKAVELMASHNMGSVIIT-KDGKLAGIITERDVIR 56


>gi|110642723|ref|YP_670453.1| putative DNA-binding transcriptional regulator [Escherichia coli
           536]
 gi|162138389|ref|YP_541872.2| putative DNA-binding transcriptional regulator [Escherichia coli
           UTI89]
 gi|191172641|ref|ZP_03034180.1| transcriptional regulator, RpiR family [Escherichia coli F11]
 gi|218559481|ref|YP_002392394.1| DNA-binding transcriptional regulator [Escherichia coli S88]
 gi|218690676|ref|YP_002398888.1| putative DNA-binding transcriptional regulator [Escherichia coli
           ED1a]
 gi|300974169|ref|ZP_07172487.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|331658705|ref|ZP_08359649.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA206]
 gi|110344315|gb|ABG70552.1| hypothetical protein YfhH [Escherichia coli 536]
 gi|190907114|gb|EDV66714.1| transcriptional regulator, RpiR family [Escherichia coli F11]
 gi|218366250|emb|CAR03997.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli S88]
 gi|218428240|emb|CAR09157.2| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli ED1a]
 gi|222034266|emb|CAP77007.1| Uncharacterized HTH-type transcriptional regulator [Escherichia
           coli LF82]
 gi|294492341|gb|ADE91097.1| transcriptional regulator, RpiR family [Escherichia coli IHE3034]
 gi|300308908|gb|EFJ63428.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|307625891|gb|ADN70195.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UM146]
 gi|312947132|gb|ADR27959.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O83:H1 str. NRG 857C]
 gi|315288037|gb|EFU47439.1| transcriptional regulator, RpiR family [Escherichia coli MS 110-3]
 gi|315300513|gb|EFU59742.1| transcriptional regulator, RpiR family [Escherichia coli MS 16-3]
 gi|323955797|gb|EGB51555.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H263]
 gi|324013579|gb|EGB82798.1| transcriptional regulator, RpiR family [Escherichia coli MS 60-1]
 gi|331054370|gb|EGI26397.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA206]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNTEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|89109367|ref|AP_003147.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. W3110]
 gi|90111460|ref|NP_417056.2| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|157162038|ref|YP_001459356.1| putative DNA-binding transcriptional regulator [Escherichia coli
           HS]
 gi|161367545|ref|NP_289117.2| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 EDL933]
 gi|161984881|ref|YP_408960.2| DNA-binding transcriptional regulator [Shigella boydii Sb227]
 gi|161986474|ref|YP_311503.2| putative DNA-binding transcriptional regulator [Shigella sonnei
           Ss046]
 gi|162139764|ref|NP_311454.2| DNA-binding transcriptional regulator [Escherichia coli O157:H7
           str. Sakai]
 gi|168748371|ref|ZP_02773393.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|168757780|ref|ZP_02782787.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|168761180|ref|ZP_02786187.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|168768663|ref|ZP_02793670.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|168773515|ref|ZP_02798522.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|168778536|ref|ZP_02803543.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|168787919|ref|ZP_02812926.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|168798941|ref|ZP_02823948.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|170082171|ref|YP_001731491.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
           substr. DH10B]
 gi|170680195|ref|YP_001744750.1| putative DNA-binding transcriptional regulator [Escherichia coli
           SMS-3-5]
 gi|187730894|ref|YP_001881340.1| putative DNA-binding transcriptional regulator [Shigella boydii CDC
           3083-94]
 gi|188495750|ref|ZP_03003020.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|194432112|ref|ZP_03064401.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
 gi|194437665|ref|ZP_03069761.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|195936708|ref|ZP_03082090.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. EC4024]
 gi|208809207|ref|ZP_03251544.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208813585|ref|ZP_03254914.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208821469|ref|ZP_03261789.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209398568|ref|YP_002272035.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209920040|ref|YP_002294124.1| putative DNA-binding transcriptional regulator [Escherichia coli
           SE11]
 gi|217326864|ref|ZP_03442947.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218696188|ref|YP_002403855.1| putative DNA-binding transcriptional regulator [Escherichia coli
           55989]
 gi|218706064|ref|YP_002413583.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UMN026]
 gi|238901726|ref|YP_002927522.1| putative DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|253772541|ref|YP_003035372.1| DNA-binding transcriptional regulator [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162536|ref|YP_003045644.1| putative DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|254794510|ref|YP_003079347.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|256017290|ref|ZP_05431155.1| putative DNA-binding transcriptional regulator [Shigella sp. D9]
 gi|256021754|ref|ZP_05435619.1| putative DNA-binding transcriptional regulator [Escherichia sp.
           4_1_40B]
 gi|260856655|ref|YP_003230546.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|260869248|ref|YP_003235650.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|261223003|ref|ZP_05937284.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259446|ref|ZP_05951979.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283786|ref|YP_003500604.1| hypothetical protein G2583_3092 [Escherichia coli O55:H7 str.
           CB9615]
 gi|293406003|ref|ZP_06649995.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1412]
 gi|293410976|ref|ZP_06654552.1| DNA-binding transcriptional regulator [Escherichia coli B354]
 gi|293415830|ref|ZP_06658473.1| DNA-binding transcriptional regulator [Escherichia coli B185]
 gi|293446915|ref|ZP_06663337.1| DNA-binding transcriptional regulator [Escherichia coli B088]
 gi|298381803|ref|ZP_06991402.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1302]
 gi|300817662|ref|ZP_07097877.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|300820761|ref|ZP_07100911.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300898324|ref|ZP_07116672.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300904256|ref|ZP_07122115.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300920729|ref|ZP_07137135.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300927062|ref|ZP_07142814.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300927687|ref|ZP_07143255.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300935693|ref|ZP_07150663.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300951721|ref|ZP_07165540.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300958798|ref|ZP_07170910.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|301024848|ref|ZP_07188485.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|301302927|ref|ZP_07209055.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|301330337|ref|ZP_07222984.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|301648325|ref|ZP_07248065.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|307139197|ref|ZP_07498553.1| putative DNA-binding transcriptional regulator [Escherichia coli
           H736]
 gi|307313868|ref|ZP_07593484.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|312973193|ref|ZP_07787365.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 1827-70]
 gi|331669310|ref|ZP_08370158.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|1175983|sp|P37767|YFHH_ECOLI RecName: Full=Uncharacterized HTH-type transcriptional regulator
           yfhH
 gi|85675452|dbj|BAE76737.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K12 substr. W3110]
 gi|87082130|gb|AAC75614.2| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|157067718|gb|ABV06973.1| transcriptional regulator, RpiR family [Escherichia coli HS]
 gi|169890006|gb|ACB03713.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. DH10B]
 gi|170517913|gb|ACB16091.1| transcriptional regulator, RpiR family [Escherichia coli SMS-3-5]
 gi|187427886|gb|ACD07160.1| transcriptional regulator, RpiR family [Shigella boydii CDC
           3083-94]
 gi|187770731|gb|EDU34575.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|188017161|gb|EDU55283.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|188490949|gb|EDU66052.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|189003190|gb|EDU72176.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|189355280|gb|EDU73699.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|189362180|gb|EDU80599.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|189368389|gb|EDU86805.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|189372295|gb|EDU90711.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|189378618|gb|EDU97034.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|194419641|gb|EDX35721.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
 gi|194423471|gb|EDX39462.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|208729008|gb|EDZ78609.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208734862|gb|EDZ83549.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208741592|gb|EDZ89274.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209159968|gb|ACI37401.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209913299|dbj|BAG78373.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|217319231|gb|EEC27656.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218352920|emb|CAU98719.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli 55989]
 gi|218433161|emb|CAR14057.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli UMN026]
 gi|238862317|gb|ACR64315.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|242378162|emb|CAQ32936.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|253323585|gb|ACT28187.1| transcriptional regulator, RpiR family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974437|gb|ACT40108.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|253978604|gb|ACT44274.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|254593910|gb|ACT73271.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|257755304|dbj|BAI26806.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|257765604|dbj|BAI37099.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|260448359|gb|ACX38781.1| transcriptional regulator, RpiR family [Escherichia coli DH1]
 gi|290763659|gb|ADD57620.1| hypothetical protein G2583_3092 [Escherichia coli O55:H7 str.
           CB9615]
 gi|291323745|gb|EFE63173.1| DNA-binding transcriptional regulator [Escherichia coli B088]
 gi|291428211|gb|EFF01238.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1412]
 gi|291433478|gb|EFF06457.1| DNA-binding transcriptional regulator [Escherichia coli B185]
 gi|291471444|gb|EFF13928.1| DNA-binding transcriptional regulator [Escherichia coli B354]
 gi|298279245|gb|EFI20759.1| DNA-binding transcriptional regulator [Escherichia coli FVEC1302]
 gi|300314546|gb|EFJ64330.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300357986|gb|EFJ73856.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300396379|gb|EFJ79917.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|300403789|gb|EFJ87327.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300412300|gb|EFJ95610.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300416946|gb|EFK00257.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300449005|gb|EFK12625.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300459127|gb|EFK22620.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300464240|gb|EFK27733.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300526514|gb|EFK47583.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300529650|gb|EFK50712.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|300841862|gb|EFK69622.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|300843671|gb|EFK71431.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|301073601|gb|EFK88407.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|306906369|gb|EFN36884.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|310331788|gb|EFP99023.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 1827-70]
 gi|315061880|gb|ADT76207.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           W]
 gi|315137185|dbj|BAJ44344.1| hypothetical protein ECDH1ME8569_2488 [Escherichia coli DH1]
 gi|315256588|gb|EFU36556.1| transcriptional regulator, RpiR family [Escherichia coli MS 85-1]
 gi|315615823|gb|EFU96455.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 3431]
 gi|320176137|gb|EFW51204.1| putative transcriptional regulator [Shigella dysenteriae CDC
           74-1112]
 gi|320186360|gb|EFW61094.1| Putative transcriptional regulator [Shigella flexneri CDC 796-83]
 gi|320188902|gb|EFW63561.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           EC1212]
 gi|320640910|gb|EFX10398.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. G5101]
 gi|320646352|gb|EFX15279.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H- str. 493-89]
 gi|320651532|gb|EFX19919.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H- str. H 2687]
 gi|320657243|gb|EFX25052.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O55:H7 str. 3256-97 TW 07815]
 gi|320662849|gb|EFX30181.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O55:H7 str. USDA 5905]
 gi|320667653|gb|EFX34568.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323156219|gb|EFZ42378.1| hypothetical protein ECEPECA14_1996 [Escherichia coli EPECa14]
 gi|323169457|gb|EFZ55130.1| hypothetical protein SS53G_0209 [Shigella sonnei 53G]
 gi|323177309|gb|EFZ62897.1| hypothetical protein ECOK1180_3795 [Escherichia coli 1180]
 gi|323184559|gb|EFZ69933.1| hypothetical protein ECOK1357_2109 [Escherichia coli 1357]
 gi|323377539|gb|ADX49807.1| transcriptional regulator, RpiR family [Escherichia coli KO11]
 gi|323941176|gb|EGB37361.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E482]
 gi|323944618|gb|EGB40686.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H120]
 gi|323961176|gb|EGB56789.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H489]
 gi|323968009|gb|EGB63421.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli M863]
 gi|323971113|gb|EGB66360.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TA007]
 gi|324020019|gb|EGB89238.1| transcriptional regulator, RpiR family [Escherichia coli MS 117-3]
 gi|324118229|gb|EGC12125.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1167]
 gi|326340367|gb|EGD64171.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           1125]
 gi|326345050|gb|EGD68794.1| Putative transcriptional regulator [Escherichia coli O157:H7 str.
           1044]
 gi|327252271|gb|EGE63943.1| hypothetical protein ECSTEC7V_3119 [Escherichia coli STEC_7v]
 gi|331064504|gb|EGI36415.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|332088013|gb|EGI93138.1| hypothetical protein SB521682_2946 [Shigella boydii 5216-82]
 gi|332089799|gb|EGI94900.1| hypothetical protein SD15574_2972 [Shigella dysenteriae 155-74]
 gi|332092600|gb|EGI97672.1| hypothetical protein SB359474_2981 [Shigella boydii 3594-74]
 gi|332344436|gb|AEE57770.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|320533705|ref|ZP_08034324.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           171 str. F0337]
 gi|320134100|gb|EFW26429.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           171 str. F0337]
          Length = 520

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 60/173 (34%), Gaps = 17/173 (9%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        ++  +    S ++  
Sbjct: 61  TPLLSAAMDTVTESDMAIAMARQGGIGILHRNLSIED-----QAQQVRRVKRSESGMV-- 113

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V     +     +    +   + VVD G  L+GIIT  D+     +   +L+V 
Sbjct: 114 -TDPVTVGPDATIAQLDGLCGHYKVSGLPVVDAGGNLQGIITNRDLRFVPPERWASLTVR 172

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M                 A  LL +H I  L +VD   +  G++   D ++
Sbjct: 173 ECMTPRDRLITGATGISREDAKALLAEHRIEKLPLVDAEGRLTGLITVKDFVK 225


>gi|271962705|ref|YP_003336901.1| IMP dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270505880|gb|ACZ84158.1| IMP dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 493

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 57/173 (32%), Gaps = 19/173 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +A+A+          RN S  D        +     +       
Sbjct: 41  RIPLISAAMDTVTEARMAVAMARQGGIGILHRNLSIED--------QAQQADLVKRSEAG 92

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +         L D   + +  R   V V      L GI+T  D+   F  D +   V
Sbjct: 93  MVTNPVTCSPDDTLADVERLCATYRISGVPVTGPDGVLVGIVTNRDMR--FETDQHR-PV 149

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM   P V          A +LLRQ+ I  L +VD   +  G++   D  +
Sbjct: 150 REVMTPMPLVTAPVGVSRDGAFELLRQNKIEKLPLVDAGGRLRGLITVKDFTK 202


>gi|228923357|ref|ZP_04086645.1| hypothetical protein bthur0011_43360 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228836311|gb|EEM81664.1| hypothetical protein bthur0011_43360 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 437

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    ++    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLRPSDTVQQWHAYNEETMHGRYPIVDENNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|261405247|ref|YP_003241488.1| RpiR family transcriptional regulator [Paenibacillus sp. Y412MC10]
 gi|261281710|gb|ACX63681.1| transcriptional regulator, RpiR family [Paenibacillus sp. Y412MC10]
          Length = 289

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 5/189 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +  +    S+ +   +    R +  +   L  L+++L    +     AV+K+ A   +V 
Sbjct: 87  RPPSVVDTSIDEQDDLMTVARKLTMQHEIL--LKNTLDLVNADNLRMAVDKLLAA-NKVY 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG     L   L   G        +        ++ + DL+  +S SGS+ +L 
Sbjct: 144 VYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLVKKGDLVFAISTSGSTRDLV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             +  A++    +I +T   +S +A +AD VL +         G   T    MQ  + + 
Sbjct: 204 DAVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGALAT--KFMQTYMLNI 261

Query: 189 LAIALLESR 197
           L   L   +
Sbjct: 262 LTTLLTMKK 270


>gi|118431283|ref|NP_147639.2| hypothetical protein APE_0974.1 [Aeropyrum pernix K1]
 gi|116062605|dbj|BAA79958.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 299

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 1/126 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+             +  V+    + +    L         +VD+   + G IT  DI 
Sbjct: 169 MTVIPNIKVNSLISRKLLTVRHDMTVREVAKFLYSHGIRGAPIVDDKNNIIGFITTTDIS 228

Query: 274 RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  +   +V+  M K    I ED  +  AM+ +  + +  L+V+D   + +GI+  
Sbjct: 229 MLIARGEDLDATVDKYMRKTVFTINEDESIYEAMRYMDFNGVGRLVVIDYAGRPLGIITR 288

Query: 333 LDLLRF 338
            D+L+ 
Sbjct: 289 TDILKA 294



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     + +A+  +     G + V+D   +  GIIT  DI +  
Sbjct: 252 INEDESIYEAMRYMDFNGVGRLVVIDYAGRPLGIITRTDILKAL 295


>gi|330837049|ref|YP_004411690.1| CBS domain containing membrane protein [Spirochaeta coccoides DSM
           17374]
 gi|329748952|gb|AEC02308.1| CBS domain containing membrane protein [Spirochaeta coccoides DSM
           17374]
          Length = 214

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +         +I+A  ++ +++   + V+D+ +KL GIITE DI            
Sbjct: 6   RMTRNPVTATPDMSVIEASGLMKKEKVHRLPVLDKNKKLVGIITEKDILYASPSPVSSLS 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V+ +M +N   I +DT +  A +L+   ++S L VV++  + +GI+  
Sbjct: 66  IHEMAYLLSEMKVKKLMSRNVVTISKDTTVEEAARLMVDQDLSSLPVVEND-RLVGIISK 124

Query: 333 LDLLRF 338
            DL + 
Sbjct: 125 SDLFKI 130


>gi|124248201|emb|CAL26197.1| conserved hypothetical protein YhcV [Bacillus amyloliquefaciens
           FZB42]
          Length = 156

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  V     + +A  ++ +   G + VVD G +LKG++T+ D  +           
Sbjct: 24  MTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDIALRTTAQGRDGQT 82

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  VM         +  L  A  L+ QH I  L +VD     +GIV   DL
Sbjct: 83  PVSHVMSSAVVSGNPEMSLEEASHLMAQHQIRRLPIVD-QNHLVGIVALGDL 133



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S++  M  +   +  +  +  A  L+ QHN+  + VVD   +  G++   D+
Sbjct: 19  SIKQSMTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDI 69


>gi|94501254|ref|ZP_01307776.1| inositol-5-monophosphate dehydrogenase [Oceanobacter sp. RED65]
 gi|94426681|gb|EAT11667.1| inositol-5-monophosphate dehydrogenase [Oceanobacter sp. RED65]
          Length = 489

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       LAIA+ +         +  +     ++  +    S V+      
Sbjct: 41  NIPLISSAMDTVTEARLAIAMAQEGGLGIIHKNMTIEEQAAEVRKVKKHESGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + +   I ++     V VVD G +L GI+T  D+      D   + V +VM 
Sbjct: 98  ITVPSNTTIRELRAITTQNSISGVPVVD-GDELVGIVTGRDVRFA---DDLNMKVSEVMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + L+ + I  L+VV++  K  G++   D+ + 
Sbjct: 154 SKDRLITVKEGASREEIEKKLQMNRIEKLLVVNETGKLAGLITVKDINKA 203


>gi|88602140|ref|YP_502318.1| signal transduction protein [Methanospirillum hungatei JF-1]
 gi|88187602|gb|ABD40599.1| putative signal transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 287

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D + IL       V V+ +G KL GIIT  D+     ++   L    +M  +P  I  D 
Sbjct: 25  DVLKILKRTGISGVPVL-KGGKLVGIITRKDLLHKPEENQLAL----LMTPDPLTIRSDA 79

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            LT A +++R HNI  + V+D+ +  +G++   DL+
Sbjct: 80  TLTEAARIMRTHNIRRMPVLDEAKNLVGLISVADLI 115



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++    L +A  I+       + V+DE + L G+I+  D+     +      ++D    +
Sbjct: 75  IRSDATLTEAARIMRTHNIRRMPVLDEAKNLVGLISVADLILAIARMKIEEEIKDTYT-S 133

Query: 293 PKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P   L E+T L +  +++       + +++   K  GI+   DL+R
Sbjct: 134 PTFALWEETPLPLVGRIMEISGFEAIPILNRESKLQGIICERDLIR 179



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M  +   +         +++L++  IS + V+    K +GI+   DLL
Sbjct: 6   VSDYMTTDVVTVEIPGNRDDVLKILKRTGISGVPVL-KGGKLVGIITRKDLL 56



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 21/134 (15%), Positives = 43/134 (32%), Gaps = 37/134 (27%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKD------------- 279
               PL     I+    F  + +++   KL+GII E D+ R    +D             
Sbjct: 139 WEETPLPLVGRIMEISGFEAIPILNRESKLQGIICERDLIRCAMIEDSVETSDLSTTGTD 198

Query: 280 -----------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                  L    V+  MI N  ++  +  ++     +++  +  
Sbjct: 199 DDEWTWESIRDVHHISYGISRVQLPNRPVKSAMITNVVMVPPNAEVSECALKMKRARVDQ 258

Query: 317 LMVVDDCQKAIGIV 330
           L +V+   +   I+
Sbjct: 259 LPIVNGDNRLKSIL 272


>gi|323170156|gb|EFZ55809.1| hypothetical protein ECLT68_5044 [Escherichia coli LT-68]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|297568932|ref|YP_003690276.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Desulfurivibrio alkaliphilus AHT2]
 gi|296924847|gb|ADH85657.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfurivibrio alkaliphilus
           AHT2]
          Length = 643

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVE 286
               +     +  A   ++E + G + V ++ +++ GI+T+ D+  +     L+    VE
Sbjct: 181 EPKTIAANESVRRAAGRMAELQIGSLLVTNQAEEIIGIVTDKDLRTKVVAAGLDYQTPVE 240

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +M    + I    +   AM  + +  I  L V +   K +G+V   D++
Sbjct: 241 QIMTSPVQTIPAHAVCFDAMLRMMRRRIHHLAV-EKQDKIVGMVTTHDIM 289



 Score = 43.7 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           PK I  +  +  A   + +  I  L+V +  ++ IGIV   DL R  ++
Sbjct: 182 PKTIAANESVRRAAGRMAELQIGSLLVTNQAEEIIGIVTDKDL-RTKVV 229


>gi|159040894|ref|YP_001540146.1| sugar isomerase (SIS) [Caldivirga maquilingensis IC-167]
 gi|157919729|gb|ABW01156.1| sugar isomerase (SIS) [Caldivirga maquilingensis IC-167]
          Length = 206

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 76/189 (40%), Gaps = 20/189 (10%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      ++ +   +F   +EK+     +V++ G G+SG +    A  L   G  S+
Sbjct: 17  SRFIEEAIKVIRPDQVNEFIDELEKLYHRGNKVLVVGAGRSGLVARGFAMRLMHLGYKSY 76

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +            +   DL++ +S SG++  + A    A+R    ++AITS   S +A 
Sbjct: 77  VLGETITP-----SVGSGDLVVAISGSGTTSIVVAAADAAKRMMAKVVAITSYPDSPLAK 131

Query: 155 HADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNF 199
            AD+VL +P   +                  LAP  +      +   DA+   L+   N 
Sbjct: 132 IADMVLVIPGRTKVSRIDDYFARQILGLHEPLAPLGTLFEDTTIVFLDAVIAELMHRLNK 191

Query: 200 SENDFYVLH 208
           +E D   +H
Sbjct: 192 TEEDLRNMH 200


>gi|91789393|ref|YP_550345.1| signal-transduction protein [Polaromonas sp. JS666]
 gi|91698618|gb|ABE45447.1| putative signal-transduction protein with CBS domains [Polaromonas
           sp. JS666]
          Length = 146

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
            +   +  V    P++DA+ +++EK  G + V+D G++  GII+E D  R      +   
Sbjct: 11  KADHKVYTVSPLAPVLDAVKLMAEKNLGALLVLD-GEEFVGIISERDCTRKMLLADRLPR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M    + +         M L+    +  L V+D+  K IG+V   DL++
Sbjct: 70  ETPVRDIMSSPVQYVGPRHTNEECMALMTDKRLRHLPVIDN-GKLIGLVSIGDLVK 124



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V       + + ++++KR   + V+D   KL G+++ GD+ ++ 
Sbjct: 77  MSSPVQYVGPRHTNEECMALMTDKRLRHLPVID-NGKLIGLVSIGDLVKDI 126


>gi|315425878|dbj|BAJ47531.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315427736|dbj|BAJ49332.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 128

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 54/110 (49%), Gaps = 2/110 (1%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDV 288
              +     L D + I++E+  G   VV E  ++ G+++E D+ R    +    + V ++
Sbjct: 11  PITIDSSATLYDVVRIMAEQNIG-FIVVLENGRMVGVLSERDVVRTLAERRDFGVKVGEI 69

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ++   +  D  +  A + + +H I  ++VVD+  K +G+V   D+L+ 
Sbjct: 70  CKRDIITLPADASVEDAAEEMGRHRIRHIVVVDNAGKLVGVVSARDVLQE 119



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 20/64 (31%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                            I  +     + DA   +   R   + VVD   KL G+++  D+
Sbjct: 57  AERRDFGVKVGEICKRDIITLPADASVEDAAEEMGRHRIRHIVVVDNAGKLVGVVSARDV 116

Query: 273 FRNF 276
            +  
Sbjct: 117 LQEL 120



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + P  I     L   ++++ + NI   +VV +  + +G++   D++R
Sbjct: 9   RGPITIDSSATLYDVVRIMAEQNIG-FIVVLENGRMVGVLSERDVVR 54


>gi|126460300|ref|YP_001056578.1| signal transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126250021|gb|ABO09112.1| putative signal transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 281

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 58/129 (44%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G L +     S       S+  V+   P+ + I++     FG + +VDE  +L GI TE
Sbjct: 71  SGTLYSDIYMKSVAEVGTRSVVTVRPNTPVGEVISLFLRHNFGSMPIVDEEGRLVGIFTE 130

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+ +   +      V DVM +   V+   + +   ++ +  +      +VD+  K + +
Sbjct: 131 WDVLKLASQLDFPHRVRDVMTRIVYVLTPYSTVMDVLEGITVYKFRRYPIVDESGKVVAM 190

Query: 330 VHFLDLLRF 338
           +H  D+LR+
Sbjct: 191 LHAKDVLRY 199



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
           +  ++  V     +++A+  +       + +V  G K+ GIIT  DI             
Sbjct: 12  ATKNVVTVSEKEKVLNAMKTMISLDIRRLPIV-RGDKVVGIITMLDILDAIYSWLSDKNA 70

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               + D+   SV +V  ++   +  +T +   + L  +HN   + +VD+  + +GI   
Sbjct: 71  SGTLYSDIYMKSVAEVGTRSVVTVRPNTPVGEVISLFLRHNFGSMPIVDEEGRLVGIFTE 130

Query: 333 LDLLRF 338
            D+L+ 
Sbjct: 131 WDVLKL 136



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V +   KN   + E   +  AM+ +   +I  L +V    K +GI+  LD+L  
Sbjct: 3   LFDRPVAEFATKNVVTVSEKEKVLNAMKTMISLDIRRLPIV-RGDKVVGIITMLDILDA 60



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----L 280
               + ++     ++D +  ++  +F    +VDE  K+  ++   D+ R F +D     +
Sbjct: 150 MTRIVYVLTPYSTVMDVLEGITVYKFRRYPIVDESGKVVAMLHAKDVLRYFAEDETVEKI 209

Query: 281 NTLSVEDVMI-------KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVH 331
              +VE+V+        K+P         +   ++ + ++++  + VV++     IG+V 
Sbjct: 210 RQGAVEEVVNNYAINIAKSPIFLAKPSDPVIDVVRKMLEYDVGGVPVVNEEGTAVIGMVT 269

Query: 332 FLDLL 336
              LL
Sbjct: 270 EKTLL 274


>gi|58584784|ref|YP_198357.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
 gi|58419100|gb|AAW71115.1| IMP dehydrogenase, GuaB [Wolbachia endosymbiont strain TRS of
           Brugia malayi]
          Length = 498

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 77/175 (44%), Gaps = 8/175 (4%)

Query: 167 ESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            S    +   +SA+  +   D A+ IA          +  V     ++  +    + ++ 
Sbjct: 35  NSIELNIPLISSAMDTVTESDFAITIAQHGGIGCIHKNLSVDEQVSEVRRVKKYENWIV- 93

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     + +AI+++ +  +  + VVD  +KL G++T  DI R       ++ V
Sbjct: 94  --YNPITISPDKTVAEAISLMKKHDYSGIPVVD-QRKLVGVLTNRDI-RFIEDQNMSIKV 149

Query: 286 EDVMIK-NPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM K     I E +     AM+LL ++ I  L+V+D+    IG++   D+ ++
Sbjct: 150 SEVMTKEKLVTIREQEVDSASAMKLLHENRIEKLLVIDENFCCIGLITVKDIEKY 204


>gi|330998963|ref|ZP_08322688.1| CBS domain protein [Parasutterella excrementihominis YIT 11859]
 gi|329575705|gb|EGG57231.1| CBS domain protein [Parasutterella excrementihominis YIT 11859]
          Length = 120

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 3/96 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +     G + V+++ ++  G+IT+ DI        KD   L VEDVM         D  +
Sbjct: 1   MRALHVGSLVVINDDRQPVGMITDRDICIEVVALEKDPKGLKVEDVMSAPVCTASADETV 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             A+  +R+  I  L VVD   K  GIV   +++  
Sbjct: 61  VDALARMREQGIRRLPVVDKDDKLCGIVTANNIVEE 96



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
               +        ++DA+  + E+    + VVD+  KL GI+T  +I     + L++
Sbjct: 47  MSAPVCTASADETVVDALARMREQGIRRLPVVDKDDKLCGIVTANNIVEEISEQLDS 103


>gi|301064753|ref|ZP_07205133.1| conserved hypothetical protein [delta proteobacterium NaphS2]
 gi|300441128|gb|EFK05513.1| conserved hypothetical protein [delta proteobacterium NaphS2]
          Length = 431

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 43/224 (19%), Positives = 78/224 (34%), Gaps = 37/224 (16%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           A+T +    +      ++    +     +G    T  + +L +   +             
Sbjct: 210 AVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGFLTGIVSRLDVFQTIT--------RKAP 261

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+  L     L   +   SD+M        V    P+ + +TI+ +     VAVVD   +
Sbjct: 262 DWERLQKHRVLVENYRYVSDIMR--RDTHTVTPDTPVHEVLTIIDDNDIQRVAVVDSDGR 319

Query: 263 LKGIITEGDIFRNFHKD---------------------------LNTLSVEDVMIKNPKV 295
           L G+I++  +   F +                            L     + VM  +   
Sbjct: 320 LLGLISDRTLLSAFSEKAPGVWEVLSKLSPFSAKPKHTGNVREKLGDQPAKAVMKTDLIT 379

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + EDT +  A+ L+ +H I  L VVDD     G++    LL+ G
Sbjct: 380 VREDTDIDQAIALMTEHGIKRLPVVDDQGMFKGMISREALLKQG 423



 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 49/132 (37%), Gaps = 20/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
                  V +  P    +  L   RF  + VVD   +  G++++ D+             
Sbjct: 123 MTREAVCVPLDEPADQVMKALLSARFTGLPVVDSENRPVGVVSQSDLIYRAGMPVRLALM 182

Query: 273 -------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                   +   K L   + +D+M      I E+  LT A+  + ++ +  L VV+    
Sbjct: 183 AQSDHERLKTVVKGLAAKTAQDIMTGPAVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGF 242

Query: 326 AIGIVHFLDLLR 337
             GIV  LD+ +
Sbjct: 243 LTGIVSRLDVFQ 254



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 53/127 (41%), Gaps = 14/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
                  ++   PL  A+T + + +   + VV+    L GI++  D+F+   +   D   
Sbjct: 206 MTGPAVTIQENDPLTRAVTAMVKNKVKRLPVVNGEGFLTGIVSRLDVFQTITRKAPDWER 265

Query: 283 LS-----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           L            V D+M ++   +  DT +   + ++  ++I  + VVD   + +G++ 
Sbjct: 266 LQKHRVLVENYRYVSDIMRRDTHTVTPDTPVHEVLTIIDDNDIQRVAVVDSDGRLLGLIS 325

Query: 332 FLDLLRF 338
              LL  
Sbjct: 326 DRTLLSA 332



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFG 339
              V DVM +    +  D      M+ L     + L VVD   + +G+V   DL+ R G
Sbjct: 116 QTRVRDVMTREAVCVPLDEPADQVMKALLSARFTGLPVVDSENRPVGVVSQSDLIYRAG 174


>gi|261855226|ref|YP_003262509.1| inosine-5'-monophosphate dehydrogenase [Halothiobacillus
           neapolitanus c2]
 gi|261835695|gb|ACX95462.1| inosine-5'-monophosphate dehydrogenase [Halothiobacillus
           neapolitanus c2]
          Length = 486

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 41  NVPLVSAAMDTVTEARLAIALAQEGGIG-----IIHKNMSVAMQADHVRQVKKYESGVIK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D + I  + R   V VVD G  L GI+T  D+   F ++L+   V  +
Sbjct: 96  DPITVPPDMSIRDVLKITRDHRISGVPVVD-GMDLVGIVTSRDLR--FERNLDQ-PVSKI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M +  N   + E         LL +  I  ++VV+D  +  G++   D+ +
Sbjct: 152 MTQQDNLVTVKEGASREEVQALLHKFRIEKVLVVNDRFELRGMITVKDIQK 202


>gi|297203562|ref|ZP_06920959.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
 gi|197714539|gb|EDY58573.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
          Length = 144

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVE--DVM 289
           V+    L++A  ++  +  G   VV +GQ++ G++T+ DI  R     ++  +V    V 
Sbjct: 17  VRPDASLVEAARLMRAQDIG-DVVVADGQRVVGLLTDRDITVRAVADGVDPQTVSAQSVC 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  +     +T A+ L+R H +  L VV +    +G+V   D+   
Sbjct: 76  TPDPLTVAPGDPVTQAVALMRTHAVRRLPVV-EDGLPVGMVSLGDIAEA 123



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM      +  D  L  A +L+R  +I  ++V D  Q+ +G++   D+ 
Sbjct: 6   VRDVMTPGVVAVRPDASLVEAARLMRAQDIGDVVVAD-GQRVVGLLTDRDIT 56


>gi|56459662|ref|YP_154943.1| nucleoside-diphosphate-sugar pyrophosphorylase [Idiomarina
           loihiensis L2TR]
 gi|56178672|gb|AAV81394.1| Nucleoside-diphosphate-sugar pyrophosphorylase [Idiomarina
           loihiensis L2TR]
          Length = 351

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              +V     + D +  L ++    V V D+  KL G++T+GDI R   K +     V  
Sbjct: 6   RNAVVGPSVSVKDTLEKLDKEALRIVLVCDDSMKLLGVVTDGDIRRALLKGMGLECDVHK 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +M  +P  I  +T    A+ L++  +I    ++++  K IG+    
Sbjct: 66  IMNPSPTTITNNTSRKDAVALMQSKSILATPILEE-GKLIGLETLQ 110


>gi|296157951|ref|ZP_06840784.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
 gi|295891719|gb|EFG71504.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
          Length = 164

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNP 293
             + DAI +++ +R G + +V    ++ GI+TE D  R      +      V D+M    
Sbjct: 23  ASVYDAIAVMAHRRVGAL-IVAHEGRIAGIVTERDYARKIVLMDRSSRHTPVRDIMSTAV 81

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +  D      M L+ ++ I  L V+    + IG+V   DL++
Sbjct: 82  RYVSPDQTTEECMALMTEYRIRYLPVIT-AGQVIGMVSIGDLVQ 124


>gi|319779428|ref|YP_004130341.1| Inosine-5'-monophosphate dehydrogenase [Taylorella equigenitalis
           MCE9]
 gi|317109452|gb|ADU92198.1| Inosine-5'-monophosphate dehydrogenase [Taylorella equigenitalis
           MCE9]
          Length = 486

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      +LAIA+ +          ++H            S V      I +
Sbjct: 40  NIPIVSAAMDTVTESSLAIAMAQEGGIG-----IIHKNMTADQQAKEVSRVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +AI +     F  + VV E  KL GI+T  D+     +D  +  + +V
Sbjct: 95  DPVTVSPQTTVREAIELQKSHGFSGLPVV-EDGKLVGIVTNRDLRF---EDRYSELIANV 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPKDRLVTMKESQTLEDAQALMHKHRLERVLIVNDNFELRGLATVKDIVK 201


>gi|254465925|ref|ZP_05079336.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           Y4I]
 gi|206686833|gb|EDZ47315.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           Y4I]
          Length = 482

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +        ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGGMGVIHKNLNTEEQAREVRRVKRFVSGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +    R     VVDE  ++ GI+T  D+        ++  V  +M 
Sbjct: 99  T---ADQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDMRFASD---DSTPVSVMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E   L  A  L++   I  L+V D  +K  G++   D
Sbjct: 153 SDNLAMLQEPADLEEAKSLMKARRIEKLLVSDKNRKLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDM 137


>gi|315427075|dbj|BAJ48691.1| hypothetical protein HGMM_F40F12C16 [Candidatus Caldiarchaeum
           subterraneum]
 gi|315428139|dbj|BAJ49725.1| hypothetical protein HGMM_F28H09C27 [Candidatus Caldiarchaeum
           subterraneum]
          Length = 192

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 55/107 (51%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V+ G  +I+A  +++E++   + + ++  K  G++TE DI        KD +  SV++VM
Sbjct: 18  VEEGSSVIEAAKVMAERKISGIVITNK-GKPVGLVTERDIVSKVVAAGKDPSRTSVKEVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K    I  +  L  A+ L+ +  +  L+V  D +  IG+    D+L
Sbjct: 77  SKPLITIDIEATLLEAVDLMNRKKVRRLLVTRDDE-VIGLFTIRDVL 122



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             T  V+DV+      + E + +  A +++ +  IS  +V+ +  K +G+V   D++
Sbjct: 2   WQTAKVKDVVKSPLISVEEGSSVIEAAKVMAERKISG-IVITNKGKPVGLVTERDIV 57


>gi|309702893|emb|CBJ02224.1| RpiR-family transcriptional regulator [Escherichia coli ETEC
           H10407]
 gi|323936301|gb|EGB32592.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1520]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|329298457|ref|ZP_08255793.1| putative DNA-binding transcriptional regulator [Plautia stali
           symbiont]
          Length = 279

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 76/178 (42%), Gaps = 5/178 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           ++ +  ++     ++ EK  +S++ ++L      +    ++ +K    R+++ GIG SG 
Sbjct: 86  ILSDDPLKVVGEKLLTEK--ISAIRATLDINSEEKLTETLQLLKNA-NRILLVGIGASGL 142

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    +  L   G  +       A    +  +   D+++ +S++G   E+      A   
Sbjct: 143 VAKDFSWKLMKIGINAVAEQDMHALLASVQAMAPGDVLLAISYTGERREINLAAQEAAAI 202

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
              ++A T    + +   A + L    E +S     A  +S   QLA+ D L +AL++
Sbjct: 203 GADVLAFTGFTPNSLQQCATVCLYTVAEEQSTR--SAAISSTSAQLALTDLLFMALVQ 258


>gi|268589342|ref|ZP_06123563.1| inosine-5'-monophosphate dehydrogenase [Providencia rettgeri DSM
           1131]
 gi|291315368|gb|EFE55821.1| inosine-5'-monophosphate dehydrogenase [Providencia rettgeri DSM
           1131]
          Length = 488

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  +      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTANIRLNIPMLSAAMDTVTESDLAIALAQEGGIGFIHKNMTIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   +     F    VV     L GIIT  D+   F  
Sbjct: 89  HESGVV---TDPVTVTPDTTIREVQEMAERNGFAGYPVVANDNSLVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL+   V  VM        + E     + +Q + +  +   +V+DD    +G++   D  
Sbjct: 144 DLDQ-PVTAVMTPKERLVTVKEGEAREIVLQKMHEKRVEKALVIDDNFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|319650833|ref|ZP_08004970.1| hypothetical protein HMPREF1013_01576 [Bacillus sp. 2_A_57_CT2]
 gi|317397431|gb|EFV78132.1| hypothetical protein HMPREF1013_01576 [Bacillus sp. 2_A_57_CT2]
          Length = 636

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED--VMI 290
           V     + +A  ++  ++   + V  E   L GIITE DI          LS +   +M 
Sbjct: 186 VSPDASIQEAAKLMHNRKISSILV-AENDCLLGIITERDIVERVAAAGADLSAQARTIMT 244

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +NP  I        A+ L+    +  L V  +  K +GIV   DLLR  
Sbjct: 245 ENPVTISRFAYYYEALSLILFKGVKHLPV-KEDSKVVGIVTLSDLLRKK 292



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +   D   + V+DVM      +  D  +  A +L+    IS ++V ++    +GI+   D
Sbjct: 165 HGENDPFIIRVQDVMSTEAAAVSPDASIQEAAKLMHNRKISSILVAENDC-LLGIITERD 223

Query: 335 LL 336
           ++
Sbjct: 224 IV 225


>gi|78044420|ref|YP_359009.1| CBS/GGDEF domain-containing protein [Carboxydothermus
           hydrogenoformans Z-2901]
 gi|77996535|gb|ABB15434.1| CBS/GGDEF domain protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 271

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   ++    L DA  ++  +R G + VV E +KL GIIT  D+       L    V
Sbjct: 9   MTRNPVTIEPYRSLWDAKELMRSQRIGGLPVV-ENEKLIGIITSKDLIFYPENRL----V 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            D M + P VI E   L  A Q + ++NI  L V+D+     GI+   
Sbjct: 64  IDAMTEEPVVIEEKAYLFDAYQKMLENNIERLPVIDESGALTGIITRK 111



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V +VM +NP  I     L  A +L+R   I  L VV++  K IGI+   DL+
Sbjct: 3   KQVREVMTRNPVTIEPYRSLWDAKELMRSQRIGGLPVVENE-KLIGIITSKDLI 55


>gi|107021736|ref|YP_620063.1| RpiR family transcriptional regulator [Burkholderia cenocepacia AU
           1054]
 gi|116688682|ref|YP_834305.1| RpiR family transcriptional regulator [Burkholderia cenocepacia
           HI2424]
 gi|170731979|ref|YP_001763926.1| RpiR family transcriptional regulator [Burkholderia cenocepacia
           MC0-3]
 gi|254246332|ref|ZP_04939653.1| Helix-turn-helix protein RpiR [Burkholderia cenocepacia PC184]
 gi|105891925|gb|ABF75090.1| transcriptional regulator, RpiR family [Burkholderia cenocepacia AU
           1054]
 gi|116646771|gb|ABK07412.1| transcriptional regulator, RpiR family [Burkholderia cenocepacia
           HI2424]
 gi|124871108|gb|EAY62824.1| Helix-turn-helix protein RpiR [Burkholderia cenocepacia PC184]
 gi|169815221|gb|ACA89804.1| transcriptional regulator, RpiR family [Burkholderia cenocepacia
           MC0-3]
          Length = 282

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|187927030|ref|YP_001893375.1| transcriptional regulator, RpiR family [Ralstonia pickettii 12J]
 gi|241665359|ref|YP_002983718.1| RpiR family transcriptional regulator [Ralstonia pickettii 12D]
 gi|187728784|gb|ACD29948.1| transcriptional regulator, RpiR family [Ralstonia pickettii 12J]
 gi|240867386|gb|ACS65046.1| transcriptional regulator, RpiR family [Ralstonia pickettii 12D]
          Length = 280

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/154 (18%), Positives = 59/154 (38%), Gaps = 5/154 (3%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            +   +   ++  +   R +      L+++              AV  +     R+ + G
Sbjct: 92  DKPRGAAAPSNVPRSGTRVLQDTIDALAAMRDRFDP---LALDAAVALVDTAH-RIDLYG 147

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
            G SG +     +     G P+            L ++   D++I +S SG+  EL+  +
Sbjct: 148 FGSSGVVARDAQTKFFRYGIPANAYSDPYLVSMSLNVLQAGDVVIAISKSGALPELQTAV 207

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
              R   + +IA+T+   S +A  AD+VL    +
Sbjct: 208 ERVRELGVHVIAVTA-PGSPLAALADVVLPADVD 240


>gi|113867197|ref|YP_725686.1| GlvR family transcriptional regulator [Ralstonia eutropha H16]
 gi|113525973|emb|CAJ92318.1| transcriptional regulator, GlvR-family [Ralstonia eutropha H16]
          Length = 315

 Score = 84.2 bits (207), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 72/177 (40%), Gaps = 7/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     A +        L S+ ++L  +   Q    ++ +   + R+   G G SG +  
Sbjct: 87  DRPADIAGKVFDRTIATLMSVRNALSAD---QIEHGIQLLAGAR-RIEFYGCGNSGIVAL 142

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G P+              ++ R D+ +++S SG + ++      AR     
Sbjct: 143 DIQHKFFRLGMPTVAYSDPHVFSMSAALLARGDVAVLVSNSGRTWDMLTAATLARSSGAS 202

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++AIT  + S +A  AD+ +    E +S  +   P TS I  L +GD LA  +  +R
Sbjct: 203 VLAIT-HSGSPLARLADVCVFSDVEEDSEVY--TPMTSRISHLVLGDVLAAGVALAR 256


>gi|323144275|ref|ZP_08078897.1| CBS domain protein [Succinatimonas hippei YIT 12066]
 gi|322415945|gb|EFY06657.1| CBS domain protein [Succinatimonas hippei YIT 12066]
          Length = 620

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSV 285
           +   LV     +      +  K   C  +VD   KL G++T+ DI  R     ++ +  V
Sbjct: 163 NDCALVSPKSTIRQTAQEIGLKHAECAFIVD-NNKLIGVVTKSDITLRAVAAGVDPSEEV 221

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +M KNP  I     L  +++L+ +HNI VL V+D   + +GI+    LL+
Sbjct: 222 SAIMSKNPVTINLTDPLYHSLELMIEHNIKVLPVID-RGQIVGIITASQLLQ 272


>gi|320200125|gb|EFW74714.1| Putative transcriptional regulator [Escherichia coli EC4100B]
          Length = 282

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|294497519|ref|YP_003561219.1| rpiR family transcriptional regulator [Bacillus megaterium QM
           B1551]
 gi|295702890|ref|YP_003595965.1| RpiR family transcriptional regulator [Bacillus megaterium DSM 319]
 gi|294347456|gb|ADE67785.1| transcriptional regulator, rpiR family [Bacillus megaterium QM
           B1551]
 gi|294800549|gb|ADF37615.1| transcriptional regulator, rpiR family [Bacillus megaterium DSM
           319]
          Length = 281

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 75/196 (38%), Gaps = 5/196 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +         + +    + +    +     I   +  + +LE++LQ   S     AV+ +
Sbjct: 70  IALAAEIMTPIQQIHEEIAETDNEKTIAEKIF--RSNVRTLENTLQILESNAIEKAVKLL 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
                +V   G G S  +          TG  +F    +         +T+ D+ +V+S 
Sbjct: 128 MKAD-KVQFYGTGGSSVVAMDAFHKFVRTGIKTFAFIDSHFQLMSASQLTKQDVAVVISH 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG++ +   IL  A+      I IT   KS ++ + D+ L    E            S I
Sbjct: 187 SGTNKDTMNILNTAKANGAKTIGITGFPKSPLSQNVDVSLYTSSEETEYRSEAL--ASRI 244

Query: 181 MQLAIGDALAIALLES 196
            QL++ DAL + ++ +
Sbjct: 245 GQLSLIDALYVNVMIA 260


>gi|167031398|ref|YP_001666629.1| CBS domain-containing protein [Pseudomonas putida GB-1]
 gi|166857886|gb|ABY96293.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Pseudomonas putida GB-1]
          Length = 645

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +     +      L +A+ ++ E++ G + VVD  +   GI T  D+ +    +   L  
Sbjct: 183 AMRHPVVCSGDTSLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVAAEDADLGA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++  M   P  +        A   + + +I+ + +V + ++  G+V   DL
Sbjct: 243 PIDRHMTAKPFYLSPQASAFDAAMAMTERHIAHVCLV-ENRRLCGVVSERDL 293



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V   DT L  A++L+ +  +  ++VVD  +  IGI    DL
Sbjct: 176 NTPLGELAMRHPVVCSGDTSLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDL 229



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                     + A    H       +       DA   ++E+    V +V E ++L G++
Sbjct: 230 RQVVAAEDADLGAPIDRHMTAKPFYLSPQASAFDAAMAMTERHIAHVCLV-ENRRLCGVV 288

Query: 268 TEGDI 272
           +E D+
Sbjct: 289 SERDL 293


>gi|288942666|ref|YP_003444906.1| putative signal transduction protein with CBS domains
           [Allochromatium vinosum DSM 180]
 gi|288898038|gb|ADC63874.1| putative signal transduction protein with CBS domains
           [Allochromatium vinosum DSM 180]
          Length = 480

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
               +        LI+   ++  +    V VV +G++  GI+T+ D+         D   
Sbjct: 15  CQTDVVTCAPDLSLIEVAELMRVRNISSV-VVRDGEEPVGIVTDRDLRNKVVAPGIDPRE 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            S  D+M      I E   L  A+ L+ +  I  L VVD   +  GIV   D LR 
Sbjct: 74  RSARDIMNSPLVTIRESDYLFEALYLMSRRRIHRLCVVDAEGRLRGIVTDTDALRL 129



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               +  ++    L +A+ ++S +R   + VVD   +L+GI+T+ D  R   +    L 
Sbjct: 80  MNSPLVTIRESDYLFEALYLMSRRRIHRLCVVDAEGRLRGIVTDTDALRLHSRSPQQLM 138



 Score = 46.4 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++    +  +   +      D  L    +L+R  NIS  +VV D ++ +GIV   DL
Sbjct: 3   AENVFFTPISKICQTDVVTCAPDLSLIEVAELMRVRNISS-VVVRDGEEPVGIVTDRDL 60


>gi|126459277|ref|YP_001055555.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248998|gb|ABO08089.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 127

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   D++        V    P+  A+  +     G V V++   +L GI+TE DI R   
Sbjct: 1   MKVRDLVRDTVISCYV--DEPVECAVAKMYAANVGSVVVLERDGRLAGIVTERDIVRFLA 58

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++++    +  V  K       D  +  A   + ++NI  + VV +  + IG++   D+L
Sbjct: 59  QEVDLKTPLGQVARKQVITASPDEAVVSAAVKMIENNIRHMPVV-EGGRVIGVISIRDVL 117

Query: 337 RF 338
           R 
Sbjct: 118 RA 119


>gi|150401102|ref|YP_001324868.1| signal-transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013805|gb|ABR56256.1| putative signal-transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 131

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/107 (28%), Positives = 51/107 (47%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK+   + D + ++ +     V V D+     GIITE DI +++ ++L  L  ED+M   
Sbjct: 18  VKLNDTIEDVVKVMGKNGISSVVVSDDNNTYWGIITEMDILKHYSENLEKLKAEDIMATK 77

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLR 337
              I     L  A Q++ +  I  L VV +    K IG +   D+++
Sbjct: 78  IIHISPIAPLEKAAQIMAEKKIHHLYVVSELREDKIIGTISAGDIIK 124



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 30/53 (56%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D+MI+    +  +  +   ++++ ++ IS ++V DD     GI+  +D+L+
Sbjct: 7   VRDLMIRGIYEVKLNDTIEDVVKVMGKNGISSVVVSDDNNTYWGIITEMDILK 59


>gi|126737809|ref|ZP_01753539.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. SK209-2-6]
 gi|126721202|gb|EBA17906.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. SK209-2-6]
          Length = 482

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H              V         
Sbjct: 39  NIPLMSSAMDTVTEARMAIAMAQAGG-----MGVIHKNLDAEEQAKQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +    R     VVD   ++ GI+T  D+        +   V  +
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDGEGRVVGIVTNRDMRFASD---DQTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  ++R   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLAMLQEPADLDEAKSMMRARRIEKLLVTDGEGKLTGLLTLKD 197



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD   + +GIV   D+
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDGEGRVVGIVTNRDM 137


>gi|330448204|ref|ZP_08311852.1| DNA-binding transcriptional regulator [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328492395|dbj|GAA06349.1| DNA-binding transcriptional regulator [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 283

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 72/178 (40%), Gaps = 6/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S++  A + +  +   + +  ++L      +F   V+ I   + R+ I GIG S     
Sbjct: 95  DSSLTIAQKLLQEKTHAMVATTNALN---YPEFETIVKLIHKAQ-RIQIVGIGGSALTAK 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G  +               +T++D++I +S+SG   E+     YA      
Sbjct: 151 DLTFKLLKIGITALTEQDPHVQIATANTLTKNDILIAISFSGKRKEVLMAAQYAYEKGAT 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           ++A+T+   + +   A   +      +      +  +S   Q  I D L +ALL+ R+
Sbjct: 211 VVALTNVKNNPLRKLAHYTIDT--IADEIQFRSSSISSRTAQNVITDLLFMALLQIRS 266


>gi|229076113|ref|ZP_04209081.1| hypothetical protein bcere0024_43100 [Bacillus cereus Rock4-18]
 gi|229099071|ref|ZP_04230005.1| hypothetical protein bcere0020_42940 [Bacillus cereus Rock3-29]
 gi|229105239|ref|ZP_04235888.1| hypothetical protein bcere0019_43730 [Bacillus cereus Rock3-28]
 gi|229118101|ref|ZP_04247460.1| hypothetical protein bcere0017_43700 [Bacillus cereus Rock1-3]
 gi|228665324|gb|EEL20807.1| hypothetical protein bcere0017_43700 [Bacillus cereus Rock1-3]
 gi|228678165|gb|EEL32393.1| hypothetical protein bcere0019_43730 [Bacillus cereus Rock3-28]
 gi|228684299|gb|EEL38243.1| hypothetical protein bcere0020_42940 [Bacillus cereus Rock3-29]
 gi|228706976|gb|EEL59181.1| hypothetical protein bcere0024_43100 [Bacillus cereus Rock4-18]
          Length = 437

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D             ++ VM K+P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKD----MIGVAKDTPIDKVMTKHPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VV+D  K  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVEDGNKLQGIISRQDVLQA 305


>gi|171184892|ref|YP_001793811.1| signal transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934104|gb|ACB39365.1| putative signal transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 139

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 2/112 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSV 285
                 V  G  L +A+ I+++   G V + D+ ++  G+++E DI R           V
Sbjct: 9   RREPITVPPGATLREAVKIMAQYNVGLVVIADQARRPVGVLSERDIIRAVAAGRTLDAKV 68

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E+V    N   + +D  +  A++ +R   +  ++VV++     G++   DL+
Sbjct: 69  EEVGTVGNILTVKKDEDIYTAIKAMRSRGVRHVVVVNEDGTVAGVLSIRDLV 120



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 31/55 (56%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V + + + P  +     L  A++++ Q+N+ ++++ D  ++ +G++   D++R 
Sbjct: 3   KVGNYIRREPITVPPGATLREAVKIMAQYNVGLVVIADQARRPVGVLSERDIIRA 57


>gi|330815532|ref|YP_004359237.1| Transcriptional regulator, RpiR family protein [Burkholderia
           gladioli BSR3]
 gi|327367925|gb|AEA59281.1| Transcriptional regulator, RpiR family protein [Burkholderia
           gladioli BSR3]
          Length = 307

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  + +   R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVAEAI-ALLSRASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      +++IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGPQDIVVAISNTGRTRDIVEAAKSALACGAKVVSIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 ASVNLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALQRG 257


>gi|302340356|ref|YP_003805562.1| RpiR family transcriptional regulator [Spirochaeta smaragdinae DSM
           11293]
 gi|301637541|gb|ADK82968.1| transcriptional regulator, RpiR family [Spirochaeta smaragdinae DSM
           11293]
          Length = 276

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 45/164 (27%), Positives = 74/164 (45%), Gaps = 8/164 (4%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I   K  L     +   +    F   ++ ++   G+V+ITG G SG I  +L + L   G
Sbjct: 99  IRKSKEALDETAMAFDED---SFERGMDLLQNA-GKVLITGSGTSGPIAHELYNRLFRLG 154

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
                            +++  DL+ V+S SG+SD +   +  A+R S+P++ IT    +
Sbjct: 155 INCTVASDVMLQIMHAALLSEKDLLFVISQSGASDMVMRAVEVAKRSSVPVMTITGNALT 214

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            +A  +D VL L    E  P  +A   S I Q AI  A+ ++L 
Sbjct: 215 ELAKASD-VLLLSVCHEQNPETVA---SRIAQHAIVQAIYLSLS 254


>gi|297745725|emb|CBI15781.3| unnamed protein product [Vitis vinifera]
          Length = 262

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  ++    G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 130 WCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVG 189

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+DD ++ IG+V   D++R 
Sbjct: 190 DIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDD-KEMIGMVSIGDVVRA 242



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+D
Sbjct: 167 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVID 226

Query: 259 EGQKLKGIITEGDIFRNF 276
           + + + G+++ GD+ R  
Sbjct: 227 DKE-MIGMVSIGDVVRAV 243


>gi|312960091|ref|ZP_07774603.1| CBS domain protein [Pseudomonas fluorescens WH6]
 gi|311285585|gb|EFQ64154.1| CBS domain protein [Pseudomonas fluorescens WH6]
          Length = 146

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-- 281
           H    +  +K    + +A+  +SEK  G + VV +G  + GII+E D   +   K L+  
Sbjct: 13  HKNQDVHTIKWDHTVFEALVRMSEKNVGALPVV-KGDVVVGIISERDYARKIMLKGLSSV 71

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T  V +VM      +     +   M ++   ++  L VV +  K +G++   DL++  I
Sbjct: 72  TTKVHEVMSSPVITVDTHKSVEECMNIMTDSHLRHLPVV-EDGKLLGLLSIGDLVKEAI 129


>gi|308172910|ref|YP_003919615.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|307605774|emb|CBI42145.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|328552550|gb|AEB23042.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
 gi|328910950|gb|AEB62546.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
          Length = 140

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  V     + +A  ++ +   G + VVD G +LKG++T+ D  +           
Sbjct: 8   MTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDIALRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  VM         +  L  A QL+ QH I  L +VD     +GIV   DL
Sbjct: 67  PVSHVMSSKVVSGNPEMSLEEASQLMAQHQIRRLPIVD-QNHLVGIVALGDL 117



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S++  M  +   +  +  +  A  L+ QHN+  + VVD   +  G++   D+
Sbjct: 3   SIKQSMTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDI 53


>gi|300697506|ref|YP_003748167.1| hypothetical protein RCFBP_mp20349 [Ralstonia solanacearum
           CFBP2957]
 gi|299074230|emb|CBJ53775.1| conserved protein of unknown function, CBS domain [Ralstonia
           solanacearum CFBP2957]
          Length = 190

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 6/124 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIF---R 274
                    I  V +   L D    + +     V V + G    ++ GI+T+ D+     
Sbjct: 36  RVDEICSRRIVHVPMSATLQDVARQMRDHNVRAVFVTEHGVTGMRIVGIVTDRDMVVHGL 95

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D   + V  VM +    I    +++ A++L+  H +  L VVDD Q+  G++   D
Sbjct: 96  ADEADCGRVPVAHVMTRGVLTIPGHAVVSDALRLMHGHGLHRLAVVDDQQRLTGMLTLDD 155

Query: 335 LLRF 338
            +R 
Sbjct: 156 AIRA 159



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 25/65 (38%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  +     + DA+ ++       +AVVD+ Q+L G++T  D  R    
Sbjct: 103 RVPVAHVMTRGVLTIPGHAVVSDALRLMHGHGLHRLAVVDDQQRLTGMLTLDDAIRAIGG 162

Query: 279 DLNTL 283
           +   L
Sbjct: 163 EWTLL 167


>gi|149204515|ref|ZP_01881481.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
 gi|149142014|gb|EDM30063.1| hypothetical protein RTM1035_00335 [Roseovarius sp. TM1035]
          Length = 231

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 56/130 (43%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           V +   + DA+ ++ +     + VVD    LKG+++EGD+ R                  
Sbjct: 14  VPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDGPRRSWWLEVLG 73

Query: 277 -----HKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                 +D   L    VEDVM ++   + EDT +    +LL +H I  + VV    K +G
Sbjct: 74  GASESAQDFVKLKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHRIKRVPVV-RSDKVVG 132

Query: 329 IVHFLDLLRF 338
           IV   +LL  
Sbjct: 133 IVSRANLLHA 142



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +D+M  +   +  +  +  A++L+  HNIS L VVD      G+V   DL+R
Sbjct: 3   AKDIMTTSVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMR 55


>gi|326509897|dbj|BAJ87164.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 550

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 15/154 (9%)

Query: 195 ESRNFSEN---DFYVLHPGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITIL 246
             R  S     D         +            +   + L     +     + +A   +
Sbjct: 26  RRRGPSMENGHDAAARRSSATISRNTTSTVTGERTVKRLRLSKALTIPDHTTVYEACRRM 85

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLT 303
           + +R   V + D    L GI+T+ DI  R   ++L      V  VM +NP  +L DTL  
Sbjct: 86  AARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVMTRNPLFVLGDTLAV 145

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            A+Q + Q     L VVD+ +    ++  LD+ +
Sbjct: 146 EALQKMVQGKFRHLPVVDNGE----VIALLDIAK 175



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 4/122 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL 280
            ++     +  V     ++ A   + E +    AVV    K  GI+T  D + R   ++L
Sbjct: 230 TIISENSKVATVAPTDTVLTASKKMLELKV-SSAVVAIENKPGGILTSRDILMRVIAQNL 288

Query: 281 --NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +V  VM ++P+    DT +  A+  +       L V+D     + +V  L +   
Sbjct: 289 PPESTTVGKVMTQSPECATIDTPILEALHTMHDGKFLHLPVLDRDGSVVTVVDVLHITHA 348

Query: 339 GI 340
            I
Sbjct: 349 AI 350


>gi|71906263|ref|YP_283850.1| CBS [Dechloromonas aromatica RCB]
 gi|71845884|gb|AAZ45380.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 143

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
              + +V     +  A+T++++   G + V+D G++L GI +E D  R      K     
Sbjct: 12  NRPLAVVAPSDTVYHALTVMAQHEVGALLVLD-GEQLVGIFSERDYARKIILQGKTSKET 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V ++M      +   + L   M L+ +     L V+D+    +G++   DL++ 
Sbjct: 71  LVREIMSDRVAYVTPGSTLDECMALMTEKRFRHLPVLDEQGGIVGMISIGDLVKE 125



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 3/110 (2%)

Query: 178 SAIMQLAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           + + Q  +G  L +   +    FSE D+          +      ++M   D +  V  G
Sbjct: 29  TVMAQHEVGALLVLDGEQLVGIFSERDYARKIILQGKTSKETLVREIM--SDRVAYVTPG 86

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             L + + +++EKRF  + V+DE   + G+I+ GD+ +    D   L  +
Sbjct: 87  STLDECMALMTEKRFRHLPVLDEQGGIVGMISIGDLVKETISDQKFLIAQ 136


>gi|117618945|ref|YP_854938.1| RpiR family transcriptional regulator [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560352|gb|ABK37300.1| transcriptional regulator, RpiR family [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 286

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 78/179 (43%), Gaps = 5/179 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++  ++   + +  EK  ++S+  + Q   +      ++ I    GRV + GIG S    
Sbjct: 94  RDDDLETMAKKLAQEK--INSIVETTQALDNATLARVLDVINQA-GRVQLVGIGGSALTA 150

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L   L   G  + F   +         +   D+ +V+S+SG+S ++ A    A+R   
Sbjct: 151 KDLWYKLLKIGVTTLFAQDSHVQISIAQTLGPGDVQLVVSYSGASRDVLAAAELAKRNGA 210

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LIA+TS   + +   AD+VL      +     ++  +S   Q  I D L + L++ R+
Sbjct: 211 TLIAVTSFRNTPLRQMADMVLDT--VADENELRISSISSRTAQNTITDILFLGLVQRRD 267


>gi|331674010|ref|ZP_08374773.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
 gi|26109332|gb|AAN81534.1|AE016764_216 Hypothetical protein yfhH [Escherichia coli CFT073]
 gi|331069283|gb|EGI40675.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
          Length = 306

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|308809011|ref|XP_003081815.1| unnamed protein product [Ostreococcus tauri]
 gi|116060282|emb|CAL55618.1| unnamed protein product [Ostreococcus tauri]
          Length = 285

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 41/146 (28%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED----- 287
           V     + +A+ +L E R   V VVDE   + G+++E D+     K   T SV+D     
Sbjct: 81  VGPNASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLMARVGKKETTRSVKDDGMFP 140

Query: 288 ------------------------------------VMIKNPKVILEDTLLTVAMQLLRQ 311
                                                M + P     DT L  A +L+  
Sbjct: 141 RVGRCDEFNGNVKQMWNQFHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELMLD 200

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
            N++ L VVD+    +GI+   D++R
Sbjct: 201 KNLARLPVVDERGALLGILSRGDIMR 226



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 29/57 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +N   V  VM      +  +  +  AM+LL ++ IS + VVD+    +G+V   DL+
Sbjct: 65  VNRDVVRSVMTSRVLSVGPNASVFEAMKLLVENRISAVPVVDEKGVVLGVVSEYDLM 121



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 40/111 (36%), Gaps = 21/111 (18%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            H   +          +    ++        PL++A  ++ +K    + VVDE   L GI
Sbjct: 159 FHNLQERMYKASGTKVLTAMHETPATCTPDTPLVEATELMLDKNLARLPVVDERGALLGI 218

Query: 267 ITEGDIFRN----------------FHKDLNTLSVEDV-----MIKNPKVI 296
           ++ GDI R                 F +++  L V D      M  +P V+
Sbjct: 219 LSRGDIMRRTFQAFLLAQQTTDRDEFAREVQKLDVSDPGINSEMNPSPSVV 269


>gi|319938514|ref|ZP_08012907.1| hypothetical protein HMPREF9488_03743 [Coprobacillus sp. 29_1]
 gi|319806278|gb|EFW02954.1| hypothetical protein HMPREF9488_03743 [Coprobacillus sp. 29_1]
          Length = 279

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 69/159 (43%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++E +     S      V++I + +  + + GIG SG +       L   G  S +  
Sbjct: 103 IQTIEKTYGLIDSRVIERVVQEIISCRN-IYLFGIGGSGTVCEDFQHKLLRIGKTSIYYA 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +  + +DDL   +S+SG + E+     +A+   +  +AIT    + +   AD
Sbjct: 162 DTHLQLTVVPNMQKDDLAFFISYSGKTKEIVTAAKWAKHMGMKSVAITQSAYNDLGKLAD 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +V+T+P E +    G   T+S +  L + D L  A+   
Sbjct: 222 MVITIPIEEKELRIGA--TSSRLSSLIVIDLLYYAIARH 258


>gi|256004006|ref|ZP_05428992.1| CBS domain containing protein [Clostridium thermocellum DSM 2360]
 gi|255992134|gb|EEU02230.1| CBS domain containing protein [Clostridium thermocellum DSM 2360]
          Length = 870

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   + +A  I+       + VV +   L GII+  D+ +          V
Sbjct: 317 MSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGIISRRDVEKARIHGFGNSPV 375

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M KN   I  +T L     LL +HNI  L VV    K +GIV   D++
Sbjct: 376 KAYMTKNVITIDPETPLKTIENLLVEHNIGRLPVV-AGNKLLGIVTRSDVI 425



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +   K++  +   +D+M    K I  D+ +  A +++ ++  S L VV       GI+
Sbjct: 299 LEKTLKKNIRPVERAKDIMSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGII 357

Query: 331 HFLDLLRFGI 340
              D+ +  I
Sbjct: 358 SRRDVEKARI 367


>gi|78065221|ref|YP_367990.1| RpiR family transcriptional regulator [Burkholderia sp. 383]
 gi|77965966|gb|ABB07346.1| transcriptional regulator, RpiR family [Burkholderia sp. 383]
          Length = 282

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|125973202|ref|YP_001037112.1| polynucleotide adenylyltransferase region [Clostridium thermocellum
           ATCC 27405]
 gi|125713427|gb|ABN51919.1| Polynucleotide adenylyltransferase region [Clostridium thermocellum
           ATCC 27405]
          Length = 877

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   + +A  I+       + VV +   L GII+  D+ +          V
Sbjct: 315 MSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGIISRRDVEKARIHGFGNSPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M KN   I  +T L     LL +HNI  L VV    K +GIV   D++
Sbjct: 374 KAYMTKNVITIDPETPLKTIENLLVEHNIGRLPVV-AGNKLLGIVTRSDVI 423



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +   K++  +   +D+M    K I  D+ +  A +++ ++  S L VV       GI+
Sbjct: 297 LEKTLKKNIRPVERAKDIMSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGII 355

Query: 331 HFLDLLRFGI 340
              D+ +  I
Sbjct: 356 SRRDVEKARI 365


>gi|316940567|gb|ADU74601.1| CBS domain containing protein [Clostridium thermocellum DSM 1313]
          Length = 877

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   + +A  I+       + VV +   L GII+  D+ +          V
Sbjct: 315 MSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGIISRRDVEKARIHGFGNSPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M KN   I  +T L     LL +HNI  L VV    K +GIV   D++
Sbjct: 374 KAYMTKNVITIDPETPLKTIENLLVEHNIGRLPVV-AGNKLLGIVTRSDVI 423



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +   K++  +   +D+M    K I  D+ +  A +++ ++  S L VV       GI+
Sbjct: 297 LEKTLKKNIRPVERAKDIMSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGII 355

Query: 331 HFLDLLRFGI 340
              D+ +  I
Sbjct: 356 SRRDVEKARI 365


>gi|281417401|ref|ZP_06248421.1| CBS domain containing protein [Clostridium thermocellum JW20]
 gi|281408803|gb|EFB39061.1| CBS domain containing protein [Clostridium thermocellum JW20]
          Length = 877

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   + +A  I+       + VV +   L GII+  D+ +          V
Sbjct: 315 MSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGIISRRDVEKARIHGFGNSPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M KN   I  +T L     LL +HNI  L VV    K +GIV   D++
Sbjct: 374 KAYMTKNVITIDPETPLKTIENLLVEHNIGRLPVV-AGNKLLGIVTRSDVI 423



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +   K++  +   +D+M    K I  D+ +  A +++ ++  S L VV       GI+
Sbjct: 297 LEKTLKKNIRPVERAKDIMSSPVKTISLDSTIDEANKIMLRYGHSGLPVV-KDGILCGII 355

Query: 331 HFLDLLRFGI 340
              D+ +  I
Sbjct: 356 SRRDVEKARI 365


>gi|157694300|ref|YP_001488762.1| transcriptional regulator [Bacillus pumilus SAFR-032]
 gi|157683058|gb|ABV64202.1| possible RpiR family transcriptional regulator [Bacillus pumilus
           SAFR-032]
          Length = 286

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 62/178 (34%), Gaps = 6/178 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G     +S      + I      +  ++  ++     QF   +E++K    + V  G G 
Sbjct: 90  GEIEASDSVADIKHKVIELTTNSIQDMKHIVEDHAVTQF---IEQMKQAH-KTVFFGAGA 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  I           G            +      T  D I+ +S SG S E+   + +A
Sbjct: 146 SSFIAGDAYHKFLQLGFDVSLCSDPHMMNMIATHATEHDFIVAISHSGESREILDAVQFA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           +     + +ITS  KS +A  +D  L       +         S I QL I D L +A
Sbjct: 206 KEKGAKIASITSYPKSELAKRSDFHLLSSSRETTYR--SDSMISRINQLVIIDVLYVA 261


>gi|108756953|ref|YP_630571.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108460833|gb|ABF86018.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 138

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           ++ G P+  A   +     G + V+ EG +L G++T+ DI        +D NT  V +VM
Sbjct: 14  IEAGEPIRAAALRMRTCNIGSLPVL-EGGQLVGMLTDRDIAVRSAALGQDPNTTPVREVM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    D  L VA +++ +  +  L+VVD  ++ +G++   DL
Sbjct: 73  TATVITCDVDATLEVAEKVMEEKMVRRLVVVDGERRPVGLLSLDDL 118



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + ++M KN + I     +  A   +R  NI  L V+ +  + +G++   D+
Sbjct: 1   MRIGELMTKNLETIEAGEPIRAAALRMRTCNIGSLPVL-EGGQLVGMLTDRDI 52


>gi|311031909|ref|ZP_07709999.1| RpiR family transcriptional regulator [Bacillus sp. m3-13]
          Length = 285

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 80/197 (40%), Gaps = 5/197 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +       + +     ++M++ + +     +   +  + +LE +L+      FH  +  I
Sbjct: 74  IALATEIVEPIQDIHENIMEHDSEKTIAEKVF--RSNIKTLEDTLKILDDQAFHQVISAI 131

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              + +V + G G S  I       L  TG                  +T +D+ I++S 
Sbjct: 132 LGAR-KVELFGSGGSNVIAMDAYHKLIRTGVSVNVQSDTHMQLMSASQLTDEDVAIIISH 190

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G+S ++  IL   +   +  I IT+  KS ++   DI L    E           +S I
Sbjct: 191 TGASKDMMHILEVVKASGVKTIGITNFAKSPLSQGVDIALYTMSEETDYRSEAL--SSRI 248

Query: 181 MQLAIGDALAIALLESR 197
            QLA+ DA+ + +L ++
Sbjct: 249 AQLAMIDAIYVNVLMAK 265


>gi|302387252|ref|YP_003823074.1| Nucleotidyl transferase [Clostridium saccharolyticum WM1]
 gi|302197880|gb|ADL05451.1| Nucleotidyl transferase [Clostridium saccharolyticum WM1]
          Length = 348

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 7/102 (6%)

Query: 232 LVKIGCPLIDAITIL--SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDV 288
           ++   C + +AI  L  + K+     VV+E  KL G++T+GDI R   K+ + ++ V  +
Sbjct: 7   IITPDCSIREAIRQLDQTAKKI---LVVEEDHKLAGVLTDGDIRRWILKNKDISMPVRLI 63

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M  +P VI ++     A++++R+  I  L +V+D  +   I+
Sbjct: 64  MNTSPIVIKKEKSHL-ALEIMREKQIEGLPLVNDNNQVTDIL 104


>gi|188996703|ref|YP_001930954.1| diguanylate cyclase with PAS/PAC sensor [Sulfurihydrogenibium sp.
           YO3AOP1]
 gi|188931770|gb|ACD66400.1| diguanylate cyclase with PAS/PAC sensor [Sulfurihydrogenibium sp.
           YO3AOP1]
          Length = 675

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 1/91 (1%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           +E R  C+ VVD+   L GIITE DI +   K +    + D+  K    +  +  L   +
Sbjct: 10  AENRISCLPVVDDNN-LIGIITEKDIVKYISKGITEDKIGDLASKPVITVSFNDTLDNVL 68

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L+++ NI  L+V+++  K  GI+   D+LR
Sbjct: 69  KLIKEKNIRHLVVLNENDKIAGILTQRDILR 99



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           +   +  V     L + + ++ EK    + V++E  K+ GI+T+ DI R+   D    
Sbjct: 51  ASKPVITVSFNDTLDNVLKLIKEKNIRHLVVLNENDKIAGILTQRDILRSLEFDYTRF 108


>gi|319649703|ref|ZP_08003859.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
 gi|317398865|gb|EFV79547.1| hypothetical protein HMPREF1013_00463 [Bacillus sp. 2_A_57_CT2]
          Length = 143

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 4/98 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTLSVEDVMIKNPKVI 296
           + +    + E   G + +VD  +KL G+IT+ D  +     K   +  VED+M  +   +
Sbjct: 21  VYEVAVKMKELNVGAIPIVD-NEKLVGMITDRDIVLRCVAEKHPASSKVEDIMSSHLVTV 79

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             DT    A +L+ +H I  L VV +  K +GIV   D
Sbjct: 80  TRDTEAREAARLMAEHQIRRLPVV-EGDKLVGIVSLGD 116


>gi|209544346|ref|YP_002276575.1| putative signal transduction protein with CBS domains
           [Gluconacetobacter diazotrophicus PAl 5]
 gi|209532023|gb|ACI51960.1| putative signal transduction protein with CBS domains
           [Gluconacetobacter diazotrophicus PAl 5]
          Length = 236

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/137 (24%), Positives = 54/137 (39%), Gaps = 25/137 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
                  V+    L DAI ++   R   + VV E   L G++TEGD+ R    +  +   
Sbjct: 7   MTSPAVCVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMRRSELETRSGHG 66

Query: 283 ---------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                                  V D+M   P  +   T+L  A+++L   NI  L VV 
Sbjct: 67  WLGDLFRSSGRQASEYVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVV- 125

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G+V   D+LR 
Sbjct: 126 ENNRVVGMVSRTDVLRA 142



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D+M      +     L  A+ L+  + +S L VV +    +G+V   DL+R
Sbjct: 3   VRDIMTSPAVCVESTRSLADAIGLMLTNRVSALPVVTENGLLVGVVTEGDLMR 55


>gi|148643674|ref|YP_001274187.1| transcriptional regulator [Methanobrevibacter smithii ATCC 35061]
 gi|261350584|ref|ZP_05976001.1| CBS domain protein [Methanobrevibacter smithii DSM 2374]
 gi|148552691|gb|ABQ87819.1| predicted transcriptional regulator [Methanobrevibacter smithii
           ATCC 35061]
 gi|288861367|gb|EFC93665.1| CBS domain protein [Methanobrevibacter smithii DSM 2374]
          Length = 300

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K+   L +A  + +        V+ E  K  G+ T  D+ R    +   L V D+M  N 
Sbjct: 185 KVSSTLKEAAEVFAFNDIKGAPVM-EDGKAVGVFTVTDLVRAIANNKEDLLVGDLMTTNI 243

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ ED  +  A++++ +  IS +++ D+    +GIV   DL+
Sbjct: 244 VIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDLI 286



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 42/98 (42%), Gaps = 14/98 (14%)

Query: 250 RFGCVAVVDEG--QKLKG-------IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           R G   V + G   K+ G       ++ +    R+  K+    +V D+  ++   +   +
Sbjct: 133 RIGPTPVNNLGVMGKIVGRDDMDNILLVDTTTIRSIPKN----TVGDIASRDVVSLKVSS 188

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A ++   ++I    V+ +  KA+G+    DL+R 
Sbjct: 189 TLKEAAEVFAFNDIKGAPVM-EDGKAVGVFTVTDLVRA 225



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              +I +V     + +AI I+ +K    V + D    L GI+T  D+
Sbjct: 239 MTTNIVIVNEDMRIANAIEIMLKKAISRVLIADNDNNLLGIVTRTDL 285


>gi|331648254|ref|ZP_08349344.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M605]
 gi|331043114|gb|EGI15254.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M605]
          Length = 306

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|296332083|ref|ZP_06874547.1| hypothetical protein BSU6633_13282 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675522|ref|YP_003867194.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150854|gb|EFG91739.1| hypothetical protein BSU6633_13282 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413766|gb|ADM38885.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 439

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   VVD+  K+ GI+T  DI            +E VM KNP  ++  T +  A Q
Sbjct: 219 ETGHGRFPVVDDQMKIHGILTSKDI----AGHDRNAPIEKVMTKNPVTVIGKTSVASAAQ 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    I VL V D  QK IG++   D+L+ 
Sbjct: 275 TMVWEGIEVLPVTDGHQKLIGMISRQDVLKA 305


>gi|290475586|ref|YP_003468474.1| IMP dehydrogenase [Xenorhabdus bovienii SS-2004]
 gi|289174907|emb|CBJ81708.1| IMP dehydrogeanse [Xenorhabdus bovienii SS-2004]
          Length = 488

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 42/182 (23%), Positives = 67/182 (36%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M      ALAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTSTIRLNVPMLSAAMDTVTESALAIALAQEGGIGFIHKNMPIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+    +   V     L +   +     F    VV E  +L GIIT  D+   F  
Sbjct: 89  HESGVV---TNPVTVTPQTTLREVHELTKRNGFAGYPVVTEENELVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL+   V  VM       ++ E     V +Q + +  +   +VVDD    +G++   D  
Sbjct: 144 DLDQ-PVTAVMTPKERLVIVKEGEAREVVLQKMHEKRVEKALVVDDSFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|222100844|ref|YP_002535412.1| TRNA nucleotidyl transferase-related protein [Thermotoga
           neapolitana DSM 4359]
 gi|221573234|gb|ACM24046.1| TRNA nucleotidyl transferase-related protein [Thermotoga
           neapolitana DSM 4359]
          Length = 864

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +   ++ +       VV EG KL GI+T+  + +  + +L    V
Sbjct: 309 MSSPVKVVLADMTIKEVNRLMEQTGHNGFPVV-EGNKLVGIVTKKAVDKAMNHNLGDRPV 367

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M  N  V   DT +T   +L+ ++ I  + ++ +    +GIV   D+LR 
Sbjct: 368 KSIMTPNLVVATPDTPVTKLRELMVENAIGRIPIL-ENGILVGIVTRSDVLRA 419



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R     +  L   D+M    KV+L D  +    +L+ Q   +   VV +  K +GIV 
Sbjct: 292 LNRLHDHVVPVLRARDIMSSPVKVVLADMTIKEVNRLMEQTGHNGFPVV-EGNKLVGIVT 350



 Score = 36.0 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              ++ +     P+     ++ E   G + ++ E   L GI+T  D+ R  
Sbjct: 371 MTPNLVVATPDTPVTKLRELMVENAIGRIPIL-ENGILVGIVTRSDVLRAI 420


>gi|218555086|ref|YP_002387999.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI1]
 gi|218361854|emb|CAQ99454.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli IAI1]
          Length = 282

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  S 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNSA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|221133878|ref|ZP_03560183.1| inositol-5-monophosphate dehydrogenase [Glaciecola sp. HTCC2999]
          Length = 489

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 61/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +         +  +    S V+      
Sbjct: 41  NIPLISAAMDTVSEARLAIALAQEGGIGFIHKNMSPEQQAEHVRQVKKYESGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    +     +     +    V DE   L GI+T  D+   F   LN  S+E VM 
Sbjct: 98  VTVRSNATIGQVNELSQRLGYSGFPVTDEENNLIGIVTGRDLR--FETHLN-ASIETVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +       V ++L+ +H I  ++VVD+  K  G++   D  + 
Sbjct: 155 PKDRLVTVKSGESSEVVLELMHEHRIEKILVVDNDFKLHGLITVKDFQKA 204


>gi|86138311|ref|ZP_01056885.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. MED193]
 gi|85824836|gb|EAQ45037.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. MED193]
          Length = 482

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIA+ ++         V+H              V      I  
Sbjct: 39  NIPLMSSAMDTVTEARMAIAMAQAGG-----MGVIHKNLDAEEQSKQVRRVKRFESGIVY 93

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  +    R     VVDE  ++ GI+T  D+      + +   V  +
Sbjct: 94  NPITLLASQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDMRFA---NDDDTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  ++R   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLAMLQEPADLDEAKSMMRARRIEKLLVTDGSGKLTGLLTLKD 197



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +L    L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLLASQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDM 137


>gi|85707037|ref|ZP_01038126.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
 gi|85668478|gb|EAQ23350.1| hypothetical protein ROS217_03240 [Roseovarius sp. 217]
          Length = 231

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           V +   + DA+ ++ +     + VVD    LKG+++EGD+ R                  
Sbjct: 14  VPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMRRVRETDGPRRSWWLEVLG 73

Query: 277 -----HKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                 +D        VEDVM ++   + EDT +    +LL +H I  + VV    K +G
Sbjct: 74  GASESAQDFVKFKSHRVEDVMTRDVVSVEEDTNVAEIARLLEKHRIKRVPVV-RSDKVVG 132

Query: 329 IVHFLDLLRF 338
           IV   +LL  
Sbjct: 133 IVSRANLLHA 142



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   D+M  +   +  +  +  A++L+  HNIS L VVD      G+V   DL+R
Sbjct: 1   MQARDIMTTSVISVPLEGQIEDAVRLMLDHNISALPVVDAEGDLKGLVSEGDLMR 55


>gi|223938924|ref|ZP_03630810.1| putative signal transduction protein with CBS domains [bacterium
           Ellin514]
 gi|223892351|gb|EEF58826.1| putative signal transduction protein with CBS domains [bacterium
           Ellin514]
          Length = 149

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           ++    + +A+  ++EK  G + V+ E  +L G+ +E D  R      K      V +++
Sbjct: 21  IQPFATVYEAVEKMAEKNVGALLVM-ENDRLVGMFSERDYTRKVVLHGKSSRQTLVREII 79

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +    +  D  +  AM+++ ++ I  L V++  Q  +G+V   DL+
Sbjct: 80  SRPVISVDPDCSVEEAMRIMTENRIRHLPVIESDQ-VVGVVSIGDLV 125



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 19/94 (20%), Positives = 37/94 (39%), Gaps = 5/94 (5%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+         G               +  V   C + +A+ I++E R   + V+ 
Sbjct: 54  FSERDYT--RKVVLHGKSSRQTLVREIISRPVISVDPDCSVEEAMRIMTENRIRHLPVI- 110

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           E  ++ G+++ GD+       + L    +ED + 
Sbjct: 111 ESDQVVGVVSIGDLVNWMISAQHLALNQMEDYIT 144


>gi|37523751|ref|NP_927128.1| chloride channel protein [Gloeobacter violaceus PCC 7421]
 gi|35214756|dbj|BAC92123.1| glr4182 [Gloeobacter violaceus PCC 7421]
          Length = 858

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 50/102 (49%), Gaps = 3/102 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVI 296
           PL +     S        VV + +KL GI+T+ D+ +   ++L  T  + ++M   P  +
Sbjct: 460 PLSEVSQAFSRSHHRGFPVV-KDEKLVGIVTQTDLMKIAARNLPPTAPLSELMTPQPVTV 518

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                L   + LL ++ +S L VV++  K +GI+   D++R 
Sbjct: 519 TPRDSLKEVLYLLNRYELSRLPVVEEA-KLVGIITRSDIIRA 559



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 19/101 (18%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            + D +   +  R G  AV DE                  K L  L+  DVM    + + 
Sbjct: 415 SIYDQLLAWNGIRLGEEAVSDE------------------KLLAQLAAGDVMQTRLETLE 456

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               L+   Q   + +     VV   +K +GIV   DL++ 
Sbjct: 457 STLPLSEVSQAFSRSHHRGFPVV-KDEKLVGIVTQTDLMKI 496


>gi|326774034|ref|ZP_08233316.1| inosine-5'-monophosphate dehydrogenase [Actinomyces viscosus C505]
 gi|326636173|gb|EGE37077.1| inosine-5'-monophosphate dehydrogenase [Actinomyces viscosus C505]
          Length = 517

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 17/173 (9%)

Query: 174 APTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            P  SA M       +AIA+          RN S  D        ++  +    S ++  
Sbjct: 58  TPLLSAAMDTVTESDMAIAMARQGGIGILHRNLSIED-----QAQQVRRVKRSESGMV-- 110

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V     +     +    +   + VVD G  L+GIIT  D+     +   +L+V 
Sbjct: 111 -TDPVTVGPDASIAQLDELCGHYKVSGLPVVDAGGNLQGIITNRDLRFVPPERWASLTVR 169

Query: 287 DVMIKNPKVILEDTLL--TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + M    ++I  +T +    A  LL +H I  L +VD      G++   D ++
Sbjct: 170 ECMTPRDRLITGETGISREDAKALLAEHRIEKLPLVDAEGCLTGLITVKDFVK 222


>gi|167630428|ref|YP_001680927.1| acetoin utilization protein, subunit b [Heliobacterium
           modesticaldum Ice1]
 gi|167593168|gb|ABZ84916.1| acetoin utilization protein, subunit b [Heliobacterium
           modesticaldum Ice1]
          Length = 212

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKD-- 279
               + +V     +++A+T+  +KR   + VVDE  +L GII++ D+          D  
Sbjct: 7   MVRQVYVVGPETTVLEALTLAEQKRVRHLPVVDE-GRLLGIISDRDLRDVKPSILEADNL 65

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             L+T  V+D++  +   +     +  A ++L  H I  L VV    K +GI+   DLL 
Sbjct: 66  EILSTTRVKDIVHTSIITVHPLDAIEDAAKMLYDHRIGCLPVV-QAGKLVGIITTTDLLH 124

Query: 338 F 338
            
Sbjct: 125 A 125



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VED+M++   V+  +T +  A+ L  Q  +  L VVD+  + +GI+   DL
Sbjct: 3   VEDIMVRQVYVVGPETTVLEALTLAEQKRVRHLPVVDE-GRLLGIISDRDL 52



 Score = 39.1 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%), Gaps = 3/61 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 D++H+      V     + DA  +L + R GC+ VV +  KL GIIT  D+   
Sbjct: 69  STTRVKDIVHTSIIT--VHPLDAIEDAAKMLYDHRIGCLPVV-QAGKLVGIITTTDLLHA 125

Query: 276 F 276
            
Sbjct: 126 I 126


>gi|197117159|ref|YP_002137586.1| inosine-5'-monophosphate dehydrogenase [Geobacter bemidjiensis Bem]
 gi|197086519|gb|ACH37790.1| inosine-5'-monophosphate dehydrogenase [Geobacter bemidjiensis Bem]
          Length = 489

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 9/182 (4%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L     +      P  SA M        AI +       F   +  V     ++  +  
Sbjct: 30  DLSSRLTNNIQLNIPLVSAAMDTVTESRAAICMAREGGIGFIHKNLTVAEQAMEVDKVKK 89

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S ++    ++   +    + +A+ ++++ R   V +     KL GI+T  D+   F  
Sbjct: 90  SESGMIVDPITM---RPNQRIREALEMMAKYRISGVPITKANGKLVGILTNRDLR--FET 144

Query: 279 DLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L+ L + D M K N   +   T L  A + L+   +  L+VVD  +   G++   D+ +
Sbjct: 145 NLDLL-ISDRMTKRNLVTVPVGTTLEQAKEHLKHTRVEKLLVVDGEKNLKGLITIKDIEK 203

Query: 338 FG 339
             
Sbjct: 204 IK 205


>gi|15806878|ref|NP_295601.1| inosine-5`-monophosphate dehydrogenase [Deinococcus radiodurans R1]
 gi|6459660|gb|AAF11432.1|AE002027_5 inosine-5`-monophosphate dehydrogenase [Deinococcus radiodurans R1]
          Length = 500

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S   + +
Sbjct: 59  NIPFVSAAMDTVTETNMAIAMAREGGIG-----VVHKNMSIDAQAEMIRKVKRSESGMIV 113

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + DA  ++ E R   V V     KL GIIT  D+      D   + + DV
Sbjct: 114 DPITLPPSATVRDADRLMGEYRISGVPVTAPDGKLLGIITNRDMRFI---DDLDVPLGDV 170

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + +   +   T L  A +L + + I  L+V  + +   G++   D+
Sbjct: 171 MTREHLVTVPVGTDLEQARELFKLNRIEKLLVT-EGEYLRGLITIKDI 217


>gi|225075147|ref|ZP_03718346.1| hypothetical protein NEIFLAOT_00147 [Neisseria flavescens
           NRL30031/H210]
 gi|241759760|ref|ZP_04757860.1| inosine-5'-monophosphate dehydrogenase [Neisseria flavescens SK114]
 gi|224953322|gb|EEG34531.1| hypothetical protein NEIFLAOT_00147 [Neisseria flavescens
           NRL30031/H210]
 gi|241319768|gb|EER56164.1| inosine-5'-monophosphate dehydrogenase [Neisseria flavescens SK114]
          Length = 487

 Score = 83.8 bits (206), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPELQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTALIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +++  H +  ++V++D  +  G++   D+L+
Sbjct: 152 IMTPRDRLVTVPEGTSIDEAREIMHAHKVERVLVLNDQDELKGLITVKDILK 203


>gi|325968392|ref|YP_004244584.1| signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323707595|gb|ADY01082.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 147

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
            K   P+  A+  +     G + ++DE  K  GI TE D+ R   + ++    +  VM K
Sbjct: 33  CKSTDPITCAVAKMYMHNVGSILIIDEDGKPTGIFTERDLVRVVAEGISLDTPLMKVMSK 92

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     +  A   + ++NI  L VV++  K +G+V   DL+R 
Sbjct: 93  KLITANTSESVISAAMKMIENNIRHLPVVEE-GKTVGMVSIRDLVRA 138


>gi|229149158|ref|ZP_04277399.1| Transcriptional regulator, RpiR [Bacillus cereus m1550]
 gi|228634357|gb|EEK90945.1| Transcriptional regulator, RpiR [Bacillus cereus m1550]
          Length = 287

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVKAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTRDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|91201164|emb|CAJ74224.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 133

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 12/125 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------- 276
                +  +     L  A  I+   R   + VV+ G+++ GI+T+ D+++          
Sbjct: 1   MMSKQLVTLNADSKLGFAEDIMYLGRIRHLPVVN-GKEIVGILTQRDLYKASLTSIVTNW 59

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+++ V +VM K+   I  +T +  A Q++    +  L VV+D    +G++   
Sbjct: 60  EENKTFLDSVKVAEVMTKDVITISPNTSIEDAAQIMIDKKVGCLPVVEDKNTLLGLITET 119

Query: 334 DLLRF 338
           D+L++
Sbjct: 120 DVLQY 124



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 28/64 (43%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             T              +  +     + DA  I+ +K+ GC+ VV++   L G+ITE D+
Sbjct: 62  NKTFLDSVKVAEVMTKDVITISPNTSIEDAAQIMIDKKVGCLPVVEDKNTLLGLITETDV 121

Query: 273 FRNF 276
            + F
Sbjct: 122 LQYF 125


>gi|284922511|emb|CBG35598.1| RpiR-family transcriptional regulator [Escherichia coli 042]
          Length = 306

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|307153055|ref|YP_003888439.1| Cl- channel voltage-gated family protein [Cyanothece sp. PCC 7822]
 gi|306983283|gb|ADN15164.1| Cl- channel voltage-gated family protein [Cyanothece sp. PCC 7822]
          Length = 874

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            L   +  +S  R     VV E  KL GI+T+ D+  N  +    +S+ ++M   P  + 
Sbjct: 467 TLDKVLQAMSISRHRGFPVV-EAGKLVGIVTQSDLS-NLGERSPDVSLREIMTPKPITVQ 524

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +T L+  + LL ++ +S L V  +    +GI+   D+++  +
Sbjct: 525 PETSLSDVLYLLNRYQLSRLPVT-EGHILVGIITRTDIIQAEV 566



 Score = 39.5 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 24/64 (37%), Gaps = 1/64 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            LG      S           V+    L D + +L+  +   + V  EG  L GIIT  D
Sbjct: 502 NLGERSPDVSLREIMTPKPITVQPETSLSDVLYLLNRYQLSRLPVT-EGHILVGIITRTD 560

Query: 272 IFRN 275
           I + 
Sbjct: 561 IIQA 564


>gi|52632001|gb|AAU85401.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
           GZfos12E1]
          Length = 187

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 31/180 (17%)

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITI 245
           + L +AL+  R    +D       G           V        +  K    L+D  T+
Sbjct: 3   NGLIVALVY-RMLDTHDAGDKKNAGHQERDVEMKKKVEEIMTKEVITAKENDSLLDVATV 61

Query: 246 LSEKRFGCVAVVDEGQKLKG-------------------IITEGDIFRNFHKDLNT---- 282
           L E +   V V++E +++ G                   I T  D+   F +DL+     
Sbjct: 62  LKENKIAGVPVLNEREEVVGVISEADVLKLLENFHWYTSIFTAHDLMNIFGEDLHDVQQD 121

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 + V+DVM K P+ +  DTL+  A Q++     + L VVD+  K +GIV   D++
Sbjct: 122 IEKASKMKVKDVMSKKPETVPPDTLIDDAAQIMHSTGFNRLPVVDENDKLVGIVARADII 181



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 37/72 (51%), Gaps = 3/72 (4%)

Query: 270 GDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           GD     H++ +      VE++M K      E+  L     +L+++ I+ + V+++ ++ 
Sbjct: 20  GDKKNAGHQERDVEMKKKVEEIMTKEVITAKENDSLLDVATVLKENKIAGVPVLNEREEV 79

Query: 327 IGIVHFLDLLRF 338
           +G++   D+L+ 
Sbjct: 80  VGVISEADVLKL 91


>gi|15615238|ref|NP_243541.1| RpiR transcriptional regulator [Bacillus halodurans C-125]
 gi|10175296|dbj|BAB06394.1| transcriptional regulator (RpiR family) [Bacillus halodurans C-125]
          Length = 287

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 68/160 (42%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +LE ++Q      F  AV+ +   + R+   G G SG I          TG PS   H
Sbjct: 111 IRTLEDTMQVLDVESFKRAVDYLLHAR-RIEFYGNGGSGVIALDAHHKFLRTGIPSAAYH 169

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T+ D+ + +S SG++ +L   L  A+   +  I IT+  K+ ++   D
Sbjct: 170 DSHFQVMSASQLTKQDVAVFISHSGTNRDLLQALEVAKSHQVKTIGITTYGKTPLSKEVD 229

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           I L    +            S + QL+I DAL + +   R
Sbjct: 230 IALYTVSQETEYRSEAL--ASRLAQLSIIDALYVNVSIRR 267


>gi|320547701|ref|ZP_08041986.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equinus ATCC
           9812]
 gi|320447776|gb|EFW88534.1| inosine-5'-monophosphate dehydrogenase [Streptococcus equinus ATCC
           9812]
          Length = 493

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A M       +AIA+  +         V+H    +         V  S + + +
Sbjct: 45  NIPIVTAAMDTVTDSRMAIAIARAGGLG-----VVHKNMSIQDQAEEIRKVKRSENGVII 99

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  ++   R   V +V+  E +KL GIIT  D+   F  D +     
Sbjct: 100 DPFFLTPKHSVSEAEELMQRYRISGVPIVETLENRKLVGIITNRDMR--FISDYHAPISA 157

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +        T L  A  +L +H I  L +VD+  +  G++   D+
Sbjct: 158 HMTSEKLVTAPVGTDLETAECILHEHRIEKLPLVDEAGRLSGLITIKDI 206


>gi|297203128|ref|ZP_06920525.1| sugar isomerase [Streptomyces sviceus ATCC 29083]
 gi|197717460|gb|EDY61494.1| sugar isomerase [Streptomyces sviceus ATCC 29083]
          Length = 312

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/158 (19%), Positives = 65/158 (41%), Gaps = 3/158 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +++ +++         A + +   + R+ + G+G SG +  +  + L   G       
Sbjct: 130 LRAIQQTIERIDLDALERAAQALAKAR-RIDVYGVGGSGAVAQETETRLFRIGCQVRGWT 188

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
               +     ++T  D+ I +S SG++ E       A+      IAIT++ +S +A  AD
Sbjct: 189 EVHGAATSAALLTPADVAIGISHSGATRETLEPFEMAKERGATTIAITTDPRSPLAKAAD 248

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           I L       S   G      +++ +   D L + + +
Sbjct: 249 IRLISATSETSFRTGSIGGRHSVLMIV--DCLYVRVGQ 284


>gi|27381105|ref|NP_772634.1| hypothetical protein blr5994 [Bradyrhizobium japonicum USDA 110]
 gi|27354271|dbj|BAC51259.1| blr5994 [Bradyrhizobium japonicum USDA 110]
          Length = 363

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 43/114 (37%), Gaps = 1/114 (0%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   +        +V     + DAI  +         V+D+  +L G++T+GD+ R
Sbjct: 5   RYLAYTRQIAMKSWRKAVVGTQATVGDAIAAIESGSIQIALVLDDQNRLLGVVTDGDVRR 64

Query: 275 NFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
              + +       D+M + P            + L+RQ +I  L +VD+    +
Sbjct: 65  GLLRGIPLTGLATDIMNRVPVSAPATLSRDDRLHLMRQKSIKQLPLVDEGGHLV 118


>gi|152974493|ref|YP_001374010.1| RpiR family transcriptional regulator [Bacillus cereus subsp.
           cytotoxis NVH 391-98]
 gi|152023245|gb|ABS21015.1| transcriptional regulator, RpiR family [Bacillus cytotoxicus NVH
           391-98]
          Length = 287

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I   +  ++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKRELEKAADAILKART-ILFYGVGGSAAPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  ++ YA++  + +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLITNLKTGDVFVAISTSGRTKDVLEVVQYAKKQGVTVIAITKLDQLSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +     +A   S + QL I DAL +       
Sbjct: 228 IHLCIPDVEQDYR--IASIASRMTQLNIIDALYVITFNRMG 266


>gi|116753803|ref|YP_842921.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665254|gb|ABK14281.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 158

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 56/145 (38%), Gaps = 36/145 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              +    +   P+ +A  +L E R   + V+D G +L G+I+E D+ R           
Sbjct: 7   MNRNPVSCQASDPIAEAARLLRENRISGMPVLD-GDELVGVISESDLLRLLSTEDDRGGL 65

Query: 278 --------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                      ++  + V DVM + P  +  D  +  A  ++ +
Sbjct: 66  WLPSPFEIFEIPVRDVIRWERMKRSLDEITKMRVADVMSRKPITVSPDASIEEAAAIMTK 125

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLL 336
           H I+ L VV +  + +GIV   D++
Sbjct: 126 HRINRLPVV-EGSRLVGIVTRGDII 149



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M +NP        +  A +LLR++ IS + V+D  +  +G++   DLLR 
Sbjct: 3   VKDIMNRNPVSCQASDPIAEAARLLRENRISGMPVLDGDE-LVGVISESDLLRL 55


>gi|327395871|dbj|BAK13293.1| HTH-type transcriptional regulator RpiR [Pantoea ananatis AJ13355]
          Length = 299

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++T +   +      + +    + L       F  A + +   + R    G G S  I 
Sbjct: 108 SDTTREIVSKVFRTSVQAIEETLAILDM---AAFEKAADLLANARQR-DFYGFGGSAQIA 163

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     GT S              ++   D+++ +S SG + ++   +  A+   +
Sbjct: 164 RDAVHKFLRIGTRSAAYDDPHMMLMSAALLNEQDVVVAISHSGRTKDIIEAVKAAQLQGV 223

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+IAIT+   S +A  AD V+    +        A   + I QL I DAL + + + 
Sbjct: 224 PVIAITNSIGSPLANLADTVICSTAQGSPLTGENA--AARIAQLNILDALFVVVAQR 278


>gi|220931559|ref|YP_002508467.1| CBS domain containing protein [Halothermothrix orenii H 168]
 gi|219992869|gb|ACL69472.1| CBS domain containing protein [Halothermothrix orenii H 168]
          Length = 865

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + +   IL +     + V  E  ++ G+ ++ D+ +    DL    V
Sbjct: 312 MSSPVRTVNPDTRIGEVEKILDKYGHTGIVVC-ENGEIVGVFSKRDLNKVKEHDLLHSPV 370

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M  +   I  D  +  A +L+ +++I  L V+ +  K +GIV   D+L
Sbjct: 371 KGYMSTDVITIDVDETIRYAQKLMVKYDIGRLPVI-EDGKLVGIVTRSDIL 420



 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V D+M    + +  DT +    ++L ++  + ++V  +  + +G+    DL
Sbjct: 307 KVRDIMSSPVRTVNPDTRIGEVEKILDKYGHTGIVVC-ENGEIVGVFSKRDL 357


>gi|307825439|ref|ZP_07655658.1| inosine-5'-monophosphate dehydrogenase [Methylobacter tundripaludum
           SV96]
 gi|307733614|gb|EFO04472.1| inosine-5'-monophosphate dehydrogenase [Methylobacter tundripaludum
           SV96]
          Length = 488

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  +A M       LAIA+ +          ++H              V         
Sbjct: 40  NIPLVAAAMDTVTEARLAIAIAQEGGIG-----IIHKNMTAEQQAREVRSVKKYESGVIK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D IT+   K    V VV+ G +L GI+T  D+     +      V  V
Sbjct: 95  DPITVTPDVSIRDVITLTRSKNISGVPVVN-GDELVGIVTSRDLRF---ETRFDEPVSKV 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E+      + LL +H I  ++VV+D     G++   D+ +  
Sbjct: 151 MTPKERLITVGENADRKEVIALLHEHRIEKVLVVNDAFHLRGMITVKDIQKAK 203


>gi|229074525|ref|ZP_04207554.1| Transcriptional regulator, RpiR [Bacillus cereus Rock4-18]
 gi|229095459|ref|ZP_04226450.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-29]
 gi|229114410|ref|ZP_04243828.1| Transcriptional regulator, RpiR [Bacillus cereus Rock1-3]
 gi|228669089|gb|EEL24513.1| Transcriptional regulator, RpiR [Bacillus cereus Rock1-3]
 gi|228688005|gb|EEL41892.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-29]
 gi|228708645|gb|EEL60789.1| Transcriptional regulator, RpiR [Bacillus cereus Rock4-18]
          Length = 287

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KILFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|55981029|ref|YP_144326.1| Mg2+ transporter MgtE [Thermus thermophilus HB8]
 gi|81600604|sp|Q5SMG8|MGTE_THET8 RecName: Full=Magnesium transporter mgtE
 gi|55772442|dbj|BAD70883.1| Mg2+ transporter MgtE [Thermus thermophilus HB8]
          Length = 450

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 153 ACHADIVLTLPKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVL--- 207
           A  A+++  L  E ++      P      I++    D LA AL   R      F  L   
Sbjct: 55  AKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDL 114

Query: 208 -----HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVV 257
                    +    +               V+ G  + + +  L            + VV
Sbjct: 115 LDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV 174

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +LKG+++  D+     +      V ++M      +  DT      +L+  ++ +VL
Sbjct: 175 DEKGRLKGVLSLRDLIVADPR----TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVL 230

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD+  + +GIV   D+L
Sbjct: 231 PVVDEEGRLVGIVTVDDVL 249



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V+      +   ++++  F  + VVDE  +L GI+T  D+     
Sbjct: 194 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 253

Query: 278 ----KDLNTLSVEDV 288
               +D++ L   DV
Sbjct: 254 AEATEDIHKLGAVDV 268


>gi|306814375|ref|ZP_07448537.1| putative DNA-binding transcriptional regulator [Escherichia coli
           NC101]
 gi|305851769|gb|EFM52221.1| putative DNA-binding transcriptional regulator [Escherichia coli
           NC101]
          Length = 282

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNTEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|158431290|pdb|2YVX|A Chain A, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431291|pdb|2YVX|B Chain B, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431292|pdb|2YVX|C Chain C, Crystal Structure Of Magnesium Transporter Mgte
 gi|158431293|pdb|2YVX|D Chain D, Crystal Structure Of Magnesium Transporter Mgte
 gi|270047591|pdb|2ZY9|A Chain A, Improved Crystal Structure Of Magnesium Transporter Mgte
 gi|270047592|pdb|2ZY9|B Chain B, Improved Crystal Structure Of Magnesium Transporter Mgte
          Length = 473

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 40/199 (20%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 153 ACHADIVLTLPKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVL--- 207
           A  A+++  L  E ++      P      I++    D LA AL   R      F  L   
Sbjct: 78  AKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDL 137

Query: 208 -----HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVV 257
                    +    +               V+ G  + + +  L            + VV
Sbjct: 138 LDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV 197

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +LKG+++  D+     +      V ++M      +  DT      +L+  ++ +VL
Sbjct: 198 DEKGRLKGVLSLRDLIVADPR----TRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVL 253

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD+  + +GIV   D+L
Sbjct: 254 PVVDEEGRLVGIVTVDDVL 272



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V+      +   ++++  F  + VVDE  +L GI+T  D+     
Sbjct: 217 PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 276

Query: 278 ----KDLNTLSVEDV 288
               +D++ L   DV
Sbjct: 277 AEATEDIHKLGAVDV 291


>gi|21226343|ref|NP_632265.1| hypothetical protein MM_0241 [Methanosarcina mazei Go1]
 gi|20904593|gb|AAM29937.1| hypothetical protein MM_0241 [Methanosarcina mazei Go1]
          Length = 500

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D I  +K    + DA   + E  F  +AVV +  +L GI+T  DI +   +++   SV
Sbjct: 384 MSDFIVTIKKDQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIFD-SV 442

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E VM K       +  + +A + L ++ +S + V+D  +K +GI+ 
Sbjct: 443 ESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQKKVLGIIT 488



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM      I +D  +  A + + +++ + L VV D  + +GI+   D+ + 
Sbjct: 380 VKDVMSDFIVTIKKDQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKA 433


>gi|285018954|ref|YP_003376665.1| signal-transduction protein with cbs domains [Xanthomonas
           albilineans GPE PC73]
 gi|283474172|emb|CBA16673.1| putative signal-transduction protein with cbs domains [Xanthomonas
           albilineans]
          Length = 142

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 5/126 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +      +   G  I  +     +I+A+ ++++K  G V V+ +   L GI++E D  R 
Sbjct: 1   MRTVRHVLSEKGGEIHAIAPDAAVIEALRLMADKGIGAVLVM-QDGHLAGILSERDYARK 59

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +   T  V D+M      +     +   M+L+    I  L VV +    +G++  
Sbjct: 60  VVLQERSSATTPVRDIMSDKVHTVDPAQSVQQCMELMTGRRIRHLPVV-EAGTVVGLISI 118

Query: 333 LDLLRF 338
            DL++ 
Sbjct: 119 GDLVKA 124



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 27/78 (34%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+                       D +  V     +   + +++ +R   + VV 
Sbjct: 51  LSERDYA--RKVVLQERSSATTPVRDIMSDKVHTVDPAQSVQQCMELMTGRRIRHLPVV- 107

Query: 259 EGQKLKGIITEGDIFRNF 276
           E   + G+I+ GD+ +  
Sbjct: 108 EAGTVVGLISIGDLVKAV 125


>gi|161486148|ref|NP_754966.2| putative DNA-binding transcriptional regulator [Escherichia coli
           CFT073]
 gi|218701074|ref|YP_002408703.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI39]
 gi|227887595|ref|ZP_04005400.1| DNA-binding transcriptional regulator [Escherichia coli 83972]
 gi|300982264|ref|ZP_07175975.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|301047199|ref|ZP_07194291.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|312965476|ref|ZP_07779708.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 2362-75]
 gi|331684210|ref|ZP_08384806.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
 gi|218371060|emb|CAR18887.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia coli IAI39]
 gi|227835945|gb|EEJ46411.1| DNA-binding transcriptional regulator [Escherichia coli 83972]
 gi|281179610|dbj|BAI55940.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|300300876|gb|EFJ57261.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|300408818|gb|EFJ92356.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|307554580|gb|ADN47355.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           ABU 83972]
 gi|312289896|gb|EFR17784.1| uncharacterized HTH-type transcriptional regulator yfhH
           [Escherichia coli 2362-75]
 gi|315292464|gb|EFU51816.1| transcriptional regulator, RpiR family [Escherichia coli MS 153-1]
 gi|320196397|gb|EFW71021.1| Putative transcriptional regulator [Escherichia coli WV_060327]
 gi|323188324|gb|EFZ73616.1| hypothetical protein ECRN5871_3430 [Escherichia coli RN587/1]
 gi|324008469|gb|EGB77688.1| transcriptional regulator, RpiR family [Escherichia coli MS 57-2]
 gi|330912332|gb|EGH40842.1| putative transcriptional regulator [Escherichia coli AA86]
 gi|331079162|gb|EGI50364.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
          Length = 282

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|163736395|ref|ZP_02143814.1| inosine-5'-monophosphate dehydrogenase [Phaeobacter gallaeciensis
           BS107]
 gi|161390265|gb|EDQ14615.1| inosine-5'-monophosphate dehydrogenase [Phaeobacter gallaeciensis
           BS107]
          Length = 482

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    L         V         
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGG-----MGVIHKNLDLEEQARQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +    R     VVD+  ++ GI+T  D+        +   V  +
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDKEGRVVGIVTNRDMRFATD---DNTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  +++   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLALLHEPAELEEAKSMMKSRRIEKLLVTDGDGKLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD   + +GIV   D+
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDKEGRVVGIVTNRDM 137


>gi|281356620|ref|ZP_06243111.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
 gi|281316747|gb|EFB00770.1| inosine-5'-monophosphate dehydrogenase [Victivallis vadensis ATCC
           BAA-548]
          Length = 497

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/199 (19%), Positives = 82/199 (41%), Gaps = 18/199 (9%)

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFS 200
           I++ ++    +   AD+     K   +    +   ++A+  +   D A+A+A L      
Sbjct: 21  ISLVTQYADFLPHDADVS---SKFSRNVKLNIPFVSAAMDTVTESDMAIAMARLGGIGVI 77

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR-----FGCVA 255
             +  +     ++  +    + ++ +  +         + +   +++EKR     F    
Sbjct: 78  HKNLSIERQADEVRKVKYYLNGIIRTPVTFH---PEQTVAE---MMNEKRVKKYSFSGFP 131

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +VD+  KL GIIT  D       ++    + DVM K P V  +   +  A +++ +H + 
Sbjct: 132 IVDDNGKLVGIITSRDFKFLSDYNIR---IRDVMTKEPVVAKDSISMLQAYKMMVEHKVG 188

Query: 316 VLMVVDDCQKAIGIVHFLD 334
            L +V+   K  G+  FLD
Sbjct: 189 KLPMVNSEGKLTGLYSFLD 207


>gi|215487905|ref|YP_002330336.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O127:H6 str. E2348/69]
 gi|215265977|emb|CAS10386.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O127:H6 str. E2348/69]
          Length = 282

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|288932855|ref|YP_003436915.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
 gi|288895103|gb|ADC66640.1| CBS domain containing protein [Ferroglobus placidus DSM 10642]
          Length = 259

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 4/120 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +    + +VK    + + I ++ +       V+D+   + G I+  D+ R   
Sbjct: 1   MRLKVKDYMTKDVVVVKPDQTIKEVIDLIEKTGHDGFPVIDDNGIVIGYISSRDLLR--- 57

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+L+T  V+DVM K   V  E   L  A +++ +   S L V+D+  K IGI+   D++R
Sbjct: 58  KNLDT-KVKDVMSKKLIVAREHMDLRDAARVMFRTGRSKLPVIDEKGKLIGIISNTDVIR 116



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + + +    L DA  ++       + V+DE  KL GII+  D+ R+  +  +   V
Sbjct: 68  MSKKLIVAREHMDLRDAARVMFRTGRSKLPVIDEKGKLIGIISNTDVIRSQIERADPKKV 127

Query: 286 E 286
           E
Sbjct: 128 E 128


>gi|238898979|ref|YP_002924661.1| IMP dehydrogenase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
 gi|229466739|gb|ACQ68513.1| IMP dehydrogenase [Candidatus Hamiltonella defensa 5AT
           (Acyrthosiphon pisum)]
          Length = 480

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 14/184 (7%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L     S      P  S+ M      ALAIAL +           +H    +       
Sbjct: 29  DLSTRLTSTIDLSIPLLSSAMDTVTEHALAIALAQEGG-----MAFIHKNMSIEKQANEV 83

Query: 221 SDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             V        +    ++    L +   +     F    VV++  +L GI+T  D+    
Sbjct: 84  QKVKKYESGVVNEPHTIRPTTTLREVKALTLRNGFAGYPVVNDHYELLGIVTGRDVRFVI 143

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             D     V  VM        + E     + +Q + +  +  ++VVDD     G++   D
Sbjct: 144 DLD---QPVTAVMTPKERLVTVKEGEAREIVLQKMHEKRVEKVLVVDDTFHLRGMITVKD 200

Query: 335 LLRF 338
             + 
Sbjct: 201 FKKA 204


>gi|228999391|ref|ZP_04158970.1| hypothetical protein bmyco0003_39460 [Bacillus mycoides Rock3-17]
 gi|229006947|ref|ZP_04164576.1| hypothetical protein bmyco0002_38470 [Bacillus mycoides Rock1-4]
 gi|228754265|gb|EEM03681.1| hypothetical protein bmyco0002_38470 [Bacillus mycoides Rock1-4]
 gi|228760336|gb|EEM09303.1| hypothetical protein bmyco0003_39460 [Bacillus mycoides Rock3-17]
          Length = 415

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D+            +E VM K P  +     +  A +
Sbjct: 197 ETMHGRYPIVDENKKVLGIVTSKDMIGI----AKETPIEKVMTKQPITVNGKMSVAAAAR 252

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VVD+  +  GI+   D+L+ 
Sbjct: 253 MMVWEGIELLPVVDESNRLQGIISRQDVLQA 283


>gi|83951853|ref|ZP_00960585.1| inosine-5'-monophosphate dehydrogenase [Roseovarius nubinhibens
           ISM]
 gi|83836859|gb|EAP76156.1| inosine-5'-monophosphate dehydrogenase [Roseovarius nubinhibens
           ISM]
          Length = 482

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + ++        +  V     ++  +    S +++S  ++
Sbjct: 39  NIPLLSSAMDTVTEGRMAICMAQAGGMGVIHKNLGVEEQAREVRRVKRFESGIVYSPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            +      L DA  ++    F    VVDE   + GI+T  D+      D     V+ +M 
Sbjct: 99  RV---DQTLADAKELVERYNFTGFPVVDEKGHVVGILTNRDMRFAKSDD---TPVKVMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E   L  A  L+R   I  L+V D   K  G++   D
Sbjct: 153 SDNLAMLAEPADLEEAKSLMRARRIEKLLVHDGKGKLTGLLTLKD 197



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +P  +  D  L  A +L+ ++N +   VVD+    +GI+   D+
Sbjct: 94  SPVTLRVDQTLADAKELVERYNFTGFPVVDEKGHVVGILTNRDM 137


>gi|302038927|ref|YP_003799249.1| hypothetical protein NIDE3646 [Candidatus Nitrospira defluvii]
 gi|300606991|emb|CBK43324.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 163

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 55/125 (44%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
                  V +   L  A  + +E  F  + VV +G++L GII++ D+ +    ++ TLS 
Sbjct: 31  MSTRAVTVTMDDSLARARDLFNEFHFHHLLVV-QGRELLGIISDRDLLKAVSPNIGTLSE 89

Query: 285 -----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                         +M +    +  DT +  A +LL +H +S L VV       GI+ + 
Sbjct: 90  TDRDRATLNKRAHQIMSRKLITVAADTTVETAARLLLEHRVSCLPVVTTTGHLEGIITWQ 149

Query: 334 DLLRF 338
           DLLR 
Sbjct: 150 DLLRA 154



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +V  +M      +  D  L  A  L  + +   L+VV   ++ +GI+   DLL+ 
Sbjct: 22  IAQPTVRAIMSTRAVTVTMDDSLARARDLFNEFHFHHLLVV-QGRELLGIISDRDLLKA 79



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           +  V     +  A  +L E R  C+ VV     L+GIIT  D+ R
Sbjct: 94  RATLNKRAHQIMSRKLITVAADTTVETAARLLLEHRVSCLPVVTTTGHLEGIITWQDLLR 153

Query: 275 NFHK 278
            + +
Sbjct: 154 AYLR 157


>gi|326796576|ref|YP_004314396.1| nucleotidyl transferase [Marinomonas mediterranea MMB-1]
 gi|326547340|gb|ADZ92560.1| Nucleotidyl transferase [Marinomonas mediterranea MMB-1]
          Length = 350

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 47/104 (45%), Gaps = 1/104 (0%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVM 289
            ++K    +  A+ I++ +      VVD+ +KL G+IT+GDI R     L+   SV  VM
Sbjct: 6   IILKSEDTIQKALEIINSEALRIALVVDDNEKLIGVITDGDIRRGILNGLSLTESVGAVM 65

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             NP      T       ++ +  I  + ++DD  K  G+    
Sbjct: 66  TTNPVTAEVGTSKRKLSNIMGEKGILSIPLIDDFGKIAGLETLH 109



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 28/48 (58%), Gaps = 1/48 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            ++  +  +  A++++    + + +VVDD +K IG++   D+ R GI+
Sbjct: 6   IILKSEDTIQKALEIINSEALRIALVVDDNEKLIGVITDGDI-RRGIL 52


>gi|253689373|ref|YP_003018563.1| inosine-5'-monophosphate dehydrogenase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251755951|gb|ACT14027.1| inosine-5'-monophosphate dehydrogenase [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 488

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---VDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV +  +L GIIT  D+   F  DL    V   M 
Sbjct: 98  QTVTPETTLREMKELTERNGFAGYPVVAKDNELVGIITGRDVR--FVTDL-EKPVSAFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLQKMHEKRVEKALVVDDKFHLIGMITVKDFQKA 204


>gi|227831168|ref|YP_002832948.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580053|ref|YP_002838453.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229581286|ref|YP_002839685.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284998666|ref|YP_003420434.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457616|gb|ACP36303.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228010769|gb|ACP46531.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228012002|gb|ACP47763.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284446562|gb|ADB88064.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 277

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 2/118 (1%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  + +   +   V        A+ I+  + FG + VVD   K  GIITE +    
Sbjct: 70  RISTTPVIDYMTPNPVTVYNTTDEFTALNIMVTRNFGSLPVVDINDKPVGIITEREFL-L 128

Query: 276 FHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +KDL+    V+  M    + I +D  L  A++L+ +     L V+DD  K +GI+  
Sbjct: 129 LYKDLDEIFPVKVFMSTKVRTIYKDVRLDQAVRLMLRRGFRRLPVIDDDNKVVGIITV 186



 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  +     L  A+ ++  + F  + V+D+  K+ GIIT  +  R   K ++ L  
Sbjct: 143 MSTKVRTIYKDVRLDQAVRLMLRRGFRRLPVIDDDNKVVGIITVVNAIRQLAKAVDKLDP 202

Query: 284 ------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +V+DVM+ N   I E   +  A   +    I  L++++      GI+   DLL
Sbjct: 203 DYFYNKAVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIKGIITERDLL 261



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              + P++     L  A   ++E   G + + +E  K++G++T  D+             
Sbjct: 7   MIRNPPILSKEDRLGLAFKRINEGGIGRIIIANE--KIEGLLTTRDLLSTVESYCKDNCS 64

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 ++T  V D M  NP  +   T    A+ ++   N   L VVD   K +GI+ 
Sbjct: 65  QGDLYRISTTPVIDYMTPNPVTVYNTTDEFTALNIMVTRNFGSLPVVDINDKPVGIIT 122



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             +  A   +  KR G + ++++   +KGIITE D+    H
Sbjct: 225 ASVNRAAAEMIVKRIGSLLILNKDNTIKGIITERDLLIAVH 265


>gi|145628536|ref|ZP_01784336.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           22.1-21]
 gi|145639866|ref|ZP_01795467.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
           PittII]
 gi|144979006|gb|EDJ88692.1| inositol-5-monophosphate dehydrogenase [Haemophilus influenzae
           22.1-21]
 gi|145271084|gb|EDK11000.1| polynucleotide phosphorylase/polyadenylase [Haemophilus influenzae
           PittII]
 gi|309750360|gb|ADO80344.1| Inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           R2866]
          Length = 488

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---SEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     ++ +  F    VVD    L GIIT  D    F KDL+  +V  VM 
Sbjct: 99  VTVSPDLSLAKLAELVKKNGFAGYPVVDSENNLIGIITGRDTR--FVKDLSK-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       + L+ QH +  +++V+D  K  G++   D  + 
Sbjct: 156 KKDRLVTVKEGATREEILALMHQHRVEKVLMVNDSFKLKGMITVKDFQKA 205



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   D +  VK G    + + ++ + R   V +V++  KLKG+IT  D  +   K
Sbjct: 149 TVSQVMTKKDRLVTVKEGATREEILALMHQHRVEKVLMVNDSFKLKGMITVKDFQKAEQK 208


>gi|330863201|emb|CBX73328.1| hypothetical protein YEW_CI09920 [Yersinia enterocolitica W22703]
          Length = 85

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 4/80 (5%)

Query: 19 MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
          M N  +  A  ++  E          L   L   F  A E + A  G+ V++GIGKSGHI
Sbjct: 1  MTNPLLTYARETLEIELTE----AQRLLSRLDNNFVHACELLLACTGKAVVSGIGKSGHI 56

Query: 79 GSKLASTLASTGTPSFFVHA 98
          G K+A++LASTGTPSFFVH 
Sbjct: 57 GKKIAASLASTGTPSFFVHP 76


>gi|170724005|ref|YP_001751693.1| CBS domain-containing protein [Pseudomonas putida W619]
 gi|169762008|gb|ACA75324.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Pseudomonas putida W619]
          Length = 645

 Score = 83.8 bits (206), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +     +   G PL DA+  + E++ G + VVD  +   GI T  D+ +        L  
Sbjct: 183 AMRHPVVCTPGTPLRDAVRSMHEQQVGSIVVVDTQRYPVGIFTLRDLRQVVATVDADLGS 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++E  M   P  +        A   + + +I+ + +VD+ Q+  G+V   DL
Sbjct: 243 AIERHMTVKPFYLSPQASAFDAAMAMTERHIAHVCLVDN-QRLCGVVSERDL 293



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V    T L  A++ + +  +  ++VVD  +  +GI    DL
Sbjct: 176 NTPLGELAMRHPVVCTPGTPLRDAVRSMHEQQVGSIVVVDTQRYPVGIFTLRDL 229



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%), Gaps = 1/49 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            H       +       DA   ++E+    V +VD  Q+L G+++E D+
Sbjct: 246 RHMTVKPFYLSPQASAFDAAMAMTERHIAHVCLVD-NQRLCGVVSERDL 293


>gi|332662391|ref|YP_004445179.1| CBS domain-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331205|gb|AEE48306.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 145

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS--VEDVM 289
           V     +  A+  L +   G + V+ EG KL GI +E D   R   K   +    V+D+M
Sbjct: 18  VSPDTSVYSALEALEKHNIGALLVM-EGDKLVGIFSERDYARRGILKGKFSRESFVKDLM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +     +   + ++ + +   L VVD  +K +G++   DL R
Sbjct: 77  TSPVFTVSPQAKIEECLTIMTEKHFRHLPVVD-GEKVLGMISSTDLFR 123



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +  DT +  A++ L +HNI  L+V+ +  K +GI    D  R GI+
Sbjct: 18  VSPDTSVYSALEALEKHNIGALLVM-EGDKLVGIFSERDYARRGIL 62



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+          +      D+M S      V     + + +TI++EK F  + VVD
Sbjct: 51  FSERDYARRGILKGKFSRESFVKDLMTSPVFT--VSPQAKIEECLTIMTEKHFRHLPVVD 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
            G+K+ G+I+  D+FR+       L
Sbjct: 109 -GEKVLGMISSTDLFRSILSQYQNL 132


>gi|292670006|ref|ZP_06603432.1| acetoin utilization protein AcuB [Selenomonas noxia ATCC 43541]
 gi|292648307|gb|EFF66279.1| acetoin utilization protein AcuB [Selenomonas noxia ATCC 43541]
          Length = 214

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +         + +A  ++ +  F  + V+D   KL G  T  D+ R          
Sbjct: 6   CMTKNPVTTSPDTGIDEAAKLMDKGHFRRLPVMD-HGKLVGFFTNRDLLRASPSAATTLD 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V DVM K+   + +   +  A  ++ +  I  L V+ +  K +GI+  
Sbjct: 65  RYEMRTLLSRIKVADVMQKDVITVTDTMTIEEAALIMTREKIGALPVLSELGKLVGIISS 124

Query: 333 LDLLRF 338
            D+ R 
Sbjct: 125 TDIFRA 130



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M KNP     DT +  A +L+ + +   L V+D   K +G     DLLR 
Sbjct: 3   VADCMTKNPVTTSPDTGIDEAAKLMDKGHFRRLPVMDH-GKLVGFFTNRDLLRA 55



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 33/85 (38%), Gaps = 7/85 (8%)

Query: 199 FSENDFYVLHPGGK-------LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           F+  D     P          + TL             +  V     + +A  I++ ++ 
Sbjct: 47  FTNRDLLRASPSAATTLDRYEMRTLLSRIKVADVMQKDVITVTDTMTIEEAALIMTREKI 106

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF 276
           G + V+ E  KL GII+  DIFR F
Sbjct: 107 GALPVLSELGKLVGIISSTDIFRAF 131


>gi|300024619|ref|YP_003757230.1| signal transduction protein with CBS domains [Hyphomicrobium
           denitrificans ATCC 51888]
 gi|299526440|gb|ADJ24909.1| putative signal transduction protein with CBS domains
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 410

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 215 TLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           T  +  SD++ +   ++  ++    L        ++  G + V+D  ++L GI++E D+ 
Sbjct: 264 TDQMRVSDILKTKGSAVKTIEPNATLRALAHSFRKESVGAMLVLDAERRLLGIVSERDLA 323

Query: 274 RN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R    F   L  + V D+M ++      +  + +   ++ Q  I  L VV      +G++
Sbjct: 324 RAIDDFGTGLPEMRVSDLMTRSVVTCAPEDSVAIVANVMTQRRIRHLPVV-VNGIVVGLI 382

Query: 331 HFLDLLR 337
              D+L+
Sbjct: 383 SIGDVLK 389



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K I  +  L       R+ ++  ++V+D  ++ +GIV   DL R 
Sbjct: 281 KTIEPNATLRALAHSFRKESVGAMLVLDAERRLLGIVSERDLARA 325


>gi|114771068|ref|ZP_01448508.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HTCC2255]
 gi|114548350|gb|EAU51236.1| inosine-5'-monophosphate dehydrogenase [alpha proteobacterium
           HTCC2255]
          Length = 483

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 9/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIAL +S        +         +  +    S    +  + 
Sbjct: 39  NIPILSSAMDTVTEAKMAIALAQSGGMGVIHRNLSDNEQASHVRRVKRFVSG---TVYNP 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +K    L +A  +  + R     VVDE  K+ GI+T  D+   F  D  TL V  +M 
Sbjct: 96  ITLKPNQTLAEAKMLADQYRITGFPVVDETGKVLGILTNRDMR--FVSDDKTL-VSSMMT 152

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N  ++ E   L  A  ++    I  L+VV       G++   DL + 
Sbjct: 153 SENLAIVSEPISLDDAKSIMHARRIEKLLVVGKENNLTGLLTTKDLEQA 201


>gi|269138285|ref|YP_003294985.1| putative rpiR-family transcriptional regulatory protein
           [Edwardsiella tarda EIB202]
 gi|267983945|gb|ACY83774.1| putative rpiR-family transcriptional regulatory protein
           [Edwardsiella tarda EIB202]
 gi|304558320|gb|ADM40984.1| Sialic acid utilization regulator, RpiR family [Edwardsiella tarda
           FL6-60]
          Length = 296

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A+ S+++E   L  +          Q   AV+ I+     + I G+G SG     + 
Sbjct: 113 LQSAINSVLSETLNLLDMA---------QVQAAVDAIRQA-NYLFICGVGSSGITAEDMK 162

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           + L   G            +    ++   D+ I +S SG+S E    L  A+      IA
Sbjct: 163 NKLMRIGYRVNGTSNNHFMYMQASLLQPGDVAIAISHSGASPETVHALKLAQEAGARTIA 222

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T    S +  +ADI L    +            +   QL + D L   L+++
Sbjct: 223 LTHNLGSALMRYADISLINGNKQGKLQGDSI--GTKTAQLFVLDLLYTLLVQA 273


>gi|110678448|ref|YP_681455.1| nucleotidyltransferase, putative [Roseobacter denitrificans OCh
           114]
 gi|109454564|gb|ABG30769.1| nucleotidyltransferase, putative [Roseobacter denitrificans OCh
           114]
          Length = 608

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                     T     S       +      G  ++DA  +++ +R  C+ + +E  +L 
Sbjct: 128 ARPDKSATQQTSLAQVSVDALMVRNPVTCTPGTSVVDAAVLMTSRRISCLCITEED-RLT 186

Query: 265 GIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D+  +     L     + D++   P  +    + +  + ++ ++N+  L +VD 
Sbjct: 187 GIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGHLPIVD- 245

Query: 323 CQKAIGIVHFLDLLR------FGII 341
             K +GIV   DL R       G++
Sbjct: 246 AGKLVGIVTQTDLTRYQATTAAGLV 270


>gi|116747621|ref|YP_844308.1| signal transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116696685|gb|ABK15873.1| putative signal transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 132

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               +   +      D    L    +  + + DE  ++ GI+TE D+       +DL  L
Sbjct: 10  MTKPVVFARKDTTARDITVQLLNGLYSGMPITDEEDQVIGIVTELDLLEAASEGRDLGEL 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + E+VM K+P     DT ++  + L+R++NI  L V  +    +GIV   D+LR 
Sbjct: 70  TAEEVMTKDPFTTDIDTPISEVINLMREYNIIRLPVT-EQGALVGIVSRCDILRK 123



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 23/59 (38%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L    VM K      +DT        L     S + + D+  + IGIV  LDLL  
Sbjct: 1   MKDLKAGSVMTKPVVFARKDTTARDITVQLLNGLYSGMPITDEEDQVIGIVTELDLLEA 59


>gi|30022686|ref|NP_834317.1| CBS domain-containing cytosolic protein [Bacillus cereus ATCC
           14579]
 gi|29898245|gb|AAP11518.1| Cytosolic protein containing multiple CBS domains [Bacillus cereus
           ATCC 14579]
          Length = 436

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPSDTVQQWHAYNEETMHGRYPIVDESNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|126462989|ref|YP_001044103.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
           17029]
 gi|126104653|gb|ABN77331.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides ATCC
           17029]
          Length = 606

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F      G   +                       +  A   + +     + VV EG   
Sbjct: 125 FTRRRTQGYRASDLTTQKVADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVV-EGSAF 183

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+  +     L+ +  V +VM ++P  +  + L +  + ++ +  I  L VV+
Sbjct: 184 LGIVTTRDMTNKVVATGLDPSTPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G++   DL RF
Sbjct: 244 E-GRLVGMITQTDLTRF 259


>gi|229062294|ref|ZP_04199615.1| hypothetical protein bcere0026_43640 [Bacillus cereus AH603]
 gi|228717022|gb|EEL68703.1| hypothetical protein bcere0026_43640 [Bacillus cereus AH603]
          Length = 437

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D        +    ++ VM K+P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKD----MIGVVKETPIDKVMTKHPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VV++  K  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVEEGNKLQGIISRQDVLQA 305


>gi|307596247|ref|YP_003902564.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307551448|gb|ADN51513.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 156

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 5/130 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITE 269
           KLG    C   +        ++    P I+A+ +++++  G V VV++    KL+GIITE
Sbjct: 7   KLGIHGGCMRAIDLVKRRPLVITEDRPFIEAVDLMAKENTGSVVVVEDLNSMKLRGIITE 66

Query: 270 GDIFRNFHKDL-NTLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            D+ R     L     V  V    P+V+    D  +     L+  + +  ++VVDD  + 
Sbjct: 67  RDVIRALANRLPLDTPVGKVGTMGPRVVRARVDDSVGTVASLMVNYRVRHVIVVDDEDRV 126

Query: 327 IGIVHFLDLL 336
           +G++   DLL
Sbjct: 127 VGVISIRDLL 136



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           + P VI ED     A+ L+ + N   ++VV+D    K  GI+   D++R 
Sbjct: 23  RRPLVITEDRPFIEAVDLMAKENTGSVVVVEDLNSMKLRGIITERDVIRA 72


>gi|229010247|ref|ZP_04167457.1| Transcriptional regulator, RpiR [Bacillus mycoides DSM 2048]
 gi|228751097|gb|EEM00913.1| Transcriptional regulator, RpiR [Bacillus mycoides DSM 2048]
          Length = 287

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +V+  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELERAADRIVNAD-KVIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA++    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKKRGATVIAITKLDQSSPLYKAAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|269140130|ref|YP_003296831.1| inositol-5-monophosphate dehydrogenase [Edwardsiella tarda EIB202]
 gi|267985791|gb|ACY85620.1| inositol-5-monophosphate dehydrogenase [Edwardsiella tarda EIB202]
 gi|304559964|gb|ADM42628.1| Inosine-5'-monophosphate dehydrogenase [Edwardsiella tarda FL6-60]
          Length = 488

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQADEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DL    V  VM 
Sbjct: 98  QTVTPSTTLREVKALTERNGFAGYPVVTEDNQLVGIITGRDVR--FVTDL-EQPVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLQRMHEKRVEKALVVDDSFHLRGMITVKDFQKA 204


>gi|254380638|ref|ZP_04996004.1| CBS [Streptomyces sp. Mg1]
 gi|194339549|gb|EDX20515.1| CBS [Streptomyces sp. Mg1]
          Length = 218

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 48/120 (40%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT-------- 282
           V       D   +L++     + V+DE  ++ G+I+E D+   +     L +        
Sbjct: 8   VVTSTSFKDVAKLLAQHDISGLPVLDEQDRVLGVISESDLIVRQTAEHPLMSDAPCGRGT 67

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  +  +VM      +  +     A +L+ +  I  L VVD+  + +GIV   DLL
Sbjct: 68  FASEVSFTAGEVMSAPAVTVHAEETAAGAARLMARRGIERLPVVDEEDRLVGIVTRRDLL 127



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M      ++  T      +LL QH+IS L V+D+  + +G++   DL+
Sbjct: 1   MTDKVASVVTSTSFKDVAKLLAQHDISGLPVLDEQDRVLGVISESDLI 48



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 27/68 (39%), Gaps = 3/68 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
                  V        A  +++ +    + VVDE  +L GI+T  D+   F     ++  
Sbjct: 80  MSAPAVTVHAEETAAGAARLMARRGIERLPVVDEEDRLVGIVTRRDLLMLFLRPDAEMRR 139

Query: 283 LSVEDVMI 290
             VE+++ 
Sbjct: 140 RVVEEILT 147


>gi|167629788|ref|YP_001680287.1| cbs domain [Heliobacterium modesticaldum Ice1]
 gi|167592528|gb|ABZ84276.1| cbs domain [Heliobacterium modesticaldum Ice1]
          Length = 151

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 55/140 (39%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V    P+ D + ++ EKR   V V+     + GII+EGD+             
Sbjct: 7   MSREVYTVYPDTPVADVVKLMIEKRISGVPVISRQGDVIGIISEGDLLFKDKDLRYPSFI 66

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F ++      L  E++M  +   + E+  ++    L+ +  ++ L 
Sbjct: 67  SLLGGMIYLESPKRFAEEFRKSIALRAEEIMTGDVITVEEEARVSEMAGLMTEQQVNRLP 126

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+    K +GIV   D+LR 
Sbjct: 127 VL-RNGKLVGIVTRADILRA 145



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++  ++M +    +  DT +   ++L+ +  IS + V+      IGI+   DLL
Sbjct: 1   MTASEIMSREVYTVYPDTPVADVVKLMIEKRISGVPVISRQGDVIGIISEGDLL 54



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           +  V+    + +   +++E++   + V+    KL GI+T  DI R
Sbjct: 86  RKSIALRAEEIMTGDVITVEEEARVSEMAGLMTEQQVNRLPVL-RNGKLVGIVTRADILR 144

Query: 275 NFHKDL 280
               D 
Sbjct: 145 ALVTDF 150


>gi|312797035|ref|YP_004029957.1| glucokinase / transcriptional regulator, RpiR family [Burkholderia
           rhizoxinica HKI 454]
 gi|312168810|emb|CBW75813.1| Glucokinase (EC 2.7.1.2) / Transcriptional regulator, RpiR family
           [Burkholderia rhizoxinica HKI 454]
          Length = 854

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 67/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + +S      + +      +  L   +  +       A++ + + + R+   
Sbjct: 634 PVSHSQVHLGDSATDFGAKVLDNTVSAILQLREQMNFD---NVERAIDMLNSAR-RIEFY 689

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL   
Sbjct: 690 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGKAPELLRT 749

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +P           S ++ L + D LA
Sbjct: 750 LEVAMQAGAQVIAITSS-NTPLAKRASVALET--DPIEIRDAQLSMISRVLHLLVIDILA 806

Query: 191 IALLESR 197
           + +   R
Sbjct: 807 VGVAIRR 813


>gi|258591711|emb|CBE68012.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 153

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPK 294
              +    + +++ GCV + +E  KL G+IT+ ++  +   +  N  T  +E++MI+NP 
Sbjct: 19  TAAEVARKMRDQKVGCVLIANE-GKLLGLITDRELTIQCVAEGWNPQTTRIEEIMIRNPY 77

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            I  D  +  A +L  Q  +    VV+D QK +GI+   D
Sbjct: 78  TIAPDFEMAEAARLFGQRKVRRFPVVEDGQKLLGILSVAD 117



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 6/49 (12%), Positives = 20/49 (40%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V D M+ +              + +R   +  +++ ++  K +G++ 
Sbjct: 1   MKVRDGMMTDLVTASPWETAAEVARKMRDQKVGCVLIANE-GKLLGLIT 48


>gi|108761961|ref|YP_631959.1| inosine-5'-monophosphate dehydrogenase [Myxococcus xanthus DK 1622]
 gi|108465841|gb|ABF91026.1| inosine-5'-monophosphate dehydrogenase [Myxococcus xanthus DK 1622]
          Length = 485

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 46/206 (22%), Positives = 76/206 (36%), Gaps = 26/206 (12%)

Query: 147 ENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAIGDALAIAL 193
                +A   D VL +P E    P                 P  SA M        AIA+
Sbjct: 3   NPDIRLALTFDDVLLVPGESSVVPKDVDLTTRLTRNLRLNIPLLSAAMDTVTESRTAIAM 62

Query: 194 LESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEK 249
            +          V+H         +    V      + +    ++   PL  A+ ++   
Sbjct: 63  AQEGGIG-----VIHKNMTPEQQALEVLKVKKFESGMVVDPVTIEPEAPLGRALELMRLH 117

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
               + VV +GQ+L GI+T  D+   F  +  T +VE +M +      E      A +LL
Sbjct: 118 GVSGIPVV-KGQRLVGIVTSRDVR--FETNF-TQTVESMMTRKLVTGREGITQEDAQKLL 173

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDL 335
            +H I  L+VV+D  +  G++   D+
Sbjct: 174 HEHRIEKLLVVNDAFELKGLITIKDI 199


>gi|21232293|ref|NP_638210.1| hypothetical protein XCC2862 [Xanthomonas campestris pv. campestris
           str. ATCC 33913]
 gi|66767573|ref|YP_242335.1| hypothetical protein XC_1246 [Xanthomonas campestris pv. campestris
           str. 8004]
 gi|188990688|ref|YP_001902698.1| hypothetical protein xccb100_1292 [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21114059|gb|AAM42134.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66572905|gb|AAY48315.1| conserved hypothetical protein [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167732448|emb|CAP50642.1| Conserved hypothetical protein [Xanthomonas campestris pv.
           campestris]
          Length = 142

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +I+AI ++++K  G V V+ EG++L GI++E D  R      +  ++ SV ++M
Sbjct: 18  VAADAAVIEAIRLMADKSIGAVLVM-EGERLVGIVSERDYARKVVLRDRSSSSTSVAEIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +     +   MQL+       L VVD+  +  G++   DL++ 
Sbjct: 77  SHAVVTVSPADSVEHCMQLMTDGRFRHLPVVDN-GRVQGVISIGDLVKA 124



 Score = 39.1 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 31/77 (40%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D+                S       ++  V     +   + ++++ RF  + VVD 
Sbjct: 52  SERDYA--RKVVLRDRSSSSTSVAEIMSHAVVTVSPADSVEHCMQLMTDGRFRHLPVVD- 108

Query: 260 GQKLKGIITEGDIFRNF 276
             +++G+I+ GD+ +  
Sbjct: 109 NGRVQGVISIGDLVKAV 125


>gi|229169337|ref|ZP_04297047.1| hypothetical protein bcere0007_42870 [Bacillus cereus AH621]
 gi|228614100|gb|EEK71215.1| hypothetical protein bcere0007_42870 [Bacillus cereus AH621]
          Length = 437

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D             ++ VM K+P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKD----MIGVAKETPIDKVMTKHPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VV+D  K  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVEDGNKLQGIISRQDVLQA 305


>gi|217073214|gb|ACJ84966.1| unknown [Medicago truncatula]
          Length = 205

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQNNVGALVVVKPGEEKSIAGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + V++D     G+V   D++R 
Sbjct: 133 DIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKGML-GMVSIGDVVRA 185



 Score = 44.5 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V++
Sbjct: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIN 169

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   L G+++ GD+ R  
Sbjct: 170 DKGML-GMVSIGDVVRAV 186


>gi|59801138|ref|YP_207850.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA
           1090]
 gi|254493820|ref|ZP_05106991.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae 1291]
 gi|260440415|ref|ZP_05794231.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|268594881|ref|ZP_06129048.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae 35/02]
 gi|268596741|ref|ZP_06130908.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA19]
 gi|268599099|ref|ZP_06133266.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|268601450|ref|ZP_06135617.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
 gi|268603784|ref|ZP_06137951.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|268682252|ref|ZP_06149114.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
 gi|268684405|ref|ZP_06151267.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
 gi|268686719|ref|ZP_06153581.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
 gi|59718033|gb|AAW89438.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA 1090]
 gi|226512860|gb|EEH62205.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae 1291]
 gi|268548270|gb|EEZ43688.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae 35/02]
 gi|268550529|gb|EEZ45548.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae FA19]
 gi|268583230|gb|EEZ47906.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|268585581|gb|EEZ50257.1| transcriptional regulator [Neisseria gonorrhoeae PID18]
 gi|268587915|gb|EEZ52591.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|268622536|gb|EEZ54936.1| transcriptional regulator [Neisseria gonorrhoeae PID332]
 gi|268624689|gb|EEZ57089.1| transcriptional regulator [Neisseria gonorrhoeae SK-92-679]
 gi|268627003|gb|EEZ59403.1| RpiR/YebK/YfhH family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
          Length = 282

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G SG +           G  +              +++  D+++ +S +GSS 
Sbjct: 129 RVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSI 188

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   +  A+     +IA+T    S +A  AD VL      +       P  S ++QLA+
Sbjct: 189 ELLDAVSIAKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAV 245

Query: 186 GDALAIALLESRN 198
            D LAI L     
Sbjct: 246 IDILAIGLALRLG 258


>gi|126175410|ref|YP_001051559.1| CBS domain-containing protein [Shewanella baltica OS155]
 gi|153001719|ref|YP_001367400.1| CBS domain-containing protein [Shewanella baltica OS185]
 gi|160876454|ref|YP_001555770.1| CBS domain-containing protein [Shewanella baltica OS195]
 gi|217972345|ref|YP_002357096.1| CBS domain-containing protein [Shewanella baltica OS223]
 gi|304410235|ref|ZP_07391854.1| CBS domain containing protein [Shewanella baltica OS183]
 gi|307302054|ref|ZP_07581812.1| CBS domain containing protein [Shewanella baltica BA175]
 gi|125998615|gb|ABN62690.1| CBS domain containing protein [Shewanella baltica OS155]
 gi|151366337|gb|ABS09337.1| CBS domain containing protein [Shewanella baltica OS185]
 gi|160861976|gb|ABX50510.1| CBS domain containing protein [Shewanella baltica OS195]
 gi|217497480|gb|ACK45673.1| CBS domain containing protein [Shewanella baltica OS223]
 gi|304351644|gb|EFM16043.1| CBS domain containing protein [Shewanella baltica OS183]
 gi|306914092|gb|EFN44513.1| CBS domain containing protein [Shewanella baltica BA175]
 gi|315268644|gb|ADT95497.1| CBS domain containing protein [Shewanella baltica OS678]
          Length = 143

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 37/125 (29%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V++   L  A  I  +  F  + VVDE  +L+G+++E D+ R           
Sbjct: 9   MSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDE-YQLEGVLSERDLLRAISPNLGSSAE 67

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +DL TL   V  VM +NP  +     L  A ++L  ++I  L V+ +  K +GIV + 
Sbjct: 68  TARDLETLQKRVHQVMTRNPVTVAPHINLDTATRILLDNDIGCLPVL-EDGKLVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA ++  Q +   L+VVD+ Q   G++   DLLR 
Sbjct: 5   IADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQ-LEGVLSERDLLRA 57



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 3/69 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                L TL      VM    +   V     L  A  IL +   GC+ V+ E  KL GI+
Sbjct: 67  ETARDLETLQKRVHQVM--TRNPVTVAPHINLDTATRILLDNDIGCLPVL-EDGKLVGIV 123

Query: 268 TEGDIFRNF 276
           T  D+ R +
Sbjct: 124 TWKDLLRAY 132


>gi|94984821|ref|YP_604185.1| signal transduction protein [Deinococcus geothermalis DSM 11300]
 gi|94555102|gb|ABF45016.1| putative signal transduction protein with CBS domains [Deinococcus
           geothermalis DSM 11300]
          Length = 211

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              +   V    P++DA+ IL E  F  + V+ EG +L GI T  D+             
Sbjct: 7   MTPNPITVTPETPVMDALKILKEHGFRRLPVM-EGDRLVGITTRKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ L+V ++M        ED  +  A   +++H++  L V++   +  GI+   
Sbjct: 66  WELNYLLSKLTVREMMASPVITAHEDEYMEDAALRMQEHDVGGLPVLNQDGRMTGIITIT 125

Query: 334 DLLRF 338
           D+LR 
Sbjct: 126 DVLRA 130



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  NP  +  +T +  A+++L++H    L V+ +  + +GI    DL
Sbjct: 3   VRDWMTPNPITVTPETPVMDALKILKEHGFRRLPVM-EGDRLVGITTRKDL 52



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 21/43 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + DA   + E   G + V+++  ++ GIIT  D+ R F
Sbjct: 89  HEDEYMEDAALRMQEHDVGGLPVLNQDGRMTGIITITDVLRAF 131


>gi|291615602|ref|YP_003518344.1| RpiR [Pantoea ananatis LMG 20103]
 gi|291150632|gb|ADD75216.1| RpiR [Pantoea ananatis LMG 20103]
          Length = 306

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 66/177 (37%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++T +   +      + +    + L       F  A + +   + R    G G S  I 
Sbjct: 115 SDTTREIVSKVFRTSVQAIEETLAILDM---AAFEKAADLLANARQR-DFYGFGGSAQIA 170

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     GT S              ++   D+++ +S SG + ++   +  A+   +
Sbjct: 171 RDAVHKFLRIGTRSAAYDDPHMMLMSAALLNEQDVVVAISHSGRTKDIIEAVKAAQLQGV 230

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+IAIT+   S +A  AD V+    +        A   + I QL I DAL + + + 
Sbjct: 231 PVIAITNSIGSPLANLADTVICSTAQGSPLTGENA--AARIAQLNILDALFVVVAQR 285


>gi|262200000|ref|YP_003271209.1| signal transduction protein with CBS domains [Haliangium ochraceum
           DSM 14365]
 gi|262083347|gb|ACY19316.1| putative signal transduction protein with CBS domains [Haliangium
           ochraceum DSM 14365]
          Length = 141

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 ++K    L  A   +       + VVD    L GI++  D+      D   L V
Sbjct: 7   MTADPTVLKPEDTLARADEEMMLGDIRHLPVVDRQGLLLGILSHRDVLAA--GDGLDLPV 64

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + M ++   +  +     A  L+ ++ I  + VVDD    +GIV   D +R 
Sbjct: 65  SEYMAEDLVTVGPEVAAHEAAYLILRYAIGSVPVVDDDGHLVGIVTQTDFVRA 117



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + V+++M  +P V+  +  L  A + +   +I  L VVD     +GI+   D+L  G
Sbjct: 1   MRVQEIMTADPTVLKPEDTLARADEEMMLGDIRHLPVVDRQGLLLGILSHRDVLAAG 57


>gi|218709245|ref|YP_002416866.1| hypothetical protein VS_1252 [Vibrio splendidus LGP32]
 gi|218322264|emb|CAV18389.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
          Length = 620

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VE 286
            + +VK    +      +  +R    AV+ EG+ + G+IT+ D+  R     ++T S + 
Sbjct: 165 QVAIVKSEQTIQSVAVEMLHQR-SPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLIS 223

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +P  +  D L+  A  ++ Q NI  L VV    K +G++    L++
Sbjct: 224 EVMTHSPVTVKPDDLVLHAASIMMQFNIRNLPVV-KENKVVGLLTTSHLVQ 273


>gi|163942343|ref|YP_001647227.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
 gi|229013815|ref|ZP_04170943.1| hypothetical protein bmyco0001_42240 [Bacillus mycoides DSM 2048]
 gi|229135445|ref|ZP_04264232.1| hypothetical protein bcere0014_43400 [Bacillus cereus BDRD-ST196]
 gi|163864540|gb|ABY45599.1| putative signal-transduction protein with CBS and DRTGG domains
           [Bacillus weihenstephanensis KBAB4]
 gi|228648006|gb|EEL04054.1| hypothetical protein bcere0014_43400 [Bacillus cereus BDRD-ST196]
 gi|228747484|gb|EEL97359.1| hypothetical protein bmyco0001_42240 [Bacillus mycoides DSM 2048]
          Length = 437

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D             ++ VM K+P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKD----MIGVAKETPIDKVMTKHPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VV+D  K  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVEDGNKLQGIISRQDVLQA 305


>gi|268592217|ref|ZP_06126438.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291312265|gb|EFE52718.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 286

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 49/195 (25%), Positives = 76/195 (38%), Gaps = 15/195 (7%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF------------QFHCAVEKIKA 62
           G   +K+     AL + IA    L  +   L  E +             QF   VE+I  
Sbjct: 75  GRQQLKDGAPHSALHNRIAPDDNLMVVAQKLAMEKNHSITETTKLIDFKQFERIVERIDQ 134

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV I GIG SG     L+  L   G  +               +   D+ IV+S++G
Sbjct: 135 SQ-RVQIVGIGGSGLTAKDLSYKLQKIGITTLVESDHHVQIAAALTLNTHDVQIVISFTG 193

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
              ++      AR+    +IAIT +  S +   AD VL    E +      +  +S   Q
Sbjct: 194 RRKDMLTAANIARKQGACVIAITRDCDSPLGQLADYVLESIAEEDEWR--SSSISSRTAQ 251

Query: 183 LAIGDALAIALLESR 197
             + D + +ALL+ R
Sbjct: 252 NTLTDLIFMALLQRR 266


>gi|54303406|ref|YP_133399.1| hypothetical protein PBPRB1739 [Photobacterium profundum SS9]
 gi|46916836|emb|CAG23599.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 622

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNT-L 283
           + ++I +V     + D    +  K+    AVV    ++ G++T+ D+ RN    +++T L
Sbjct: 162 ASENITIVDDSTSIQDVAKTMCGKQRSSCAVVMNKGEIVGMVTDRDMTRNVVAAEIDTNL 221

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  VM  +P +I  D  +  A+ L+ Q NI  L V+    K  G++    L+
Sbjct: 222 PISKVMNPSPILIQSDDKVIQAISLMLQFNIRCLPVL-KDGKVTGLLTTTHLV 273


>gi|259418752|ref|ZP_05742669.1| inosine-5'-monophosphate dehydrogenase [Silicibacter sp. TrichCH4B]
 gi|259344974|gb|EEW56828.1| inosine-5'-monophosphate dehydrogenase [Silicibacter sp. TrichCH4B]
          Length = 559

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AI + ++         V+H    +         V         
Sbjct: 116 NIPLLSSAMDTVTESRMAITMAQAGG-----MGVIHKNLDVEEQARQVRRVKRFESGIVY 170

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  +    R     VVD   ++ GI+T  D+        +   V  +
Sbjct: 171 NPITLRADQTLADAKALQERYRVTGFPVVDNNGRVVGIVTNRDMRFASD---DKTPVSVM 227

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  +   ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 228 MTSDKLAMLQEPAEREEAISLMKARRIEKLLVTDKDGKLTGLLTLKD 274



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 171 NPITLRADQTLADAKALQERYRVTGFPVVDNNGRVVGIVTNRDM 214


>gi|52786806|ref|YP_092635.1| YtoI [Bacillus licheniformis ATCC 14580]
 gi|52349308|gb|AAU41942.1| YtoI [Bacillus licheniformis ATCC 14580]
          Length = 443

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE  K+ GI+T  D+         ++ +E VM KNP  ++  T +  A Q
Sbjct: 222 ETGHGRFPIVDEQMKIHGILTSKDV----AGYDRSVLIEKVMTKNPITVIGKTSVASAAQ 277

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL VVD+ QK IG++   D+L+ 
Sbjct: 278 MMVWEGIEVLPVVDERQKLIGMISRQDVLKA 308


>gi|77464146|ref|YP_353650.1| signal transduction protein [Rhodobacter sphaeroides 2.4.1]
 gi|332559022|ref|ZP_08413344.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
 gi|77388564|gb|ABA79749.1| Predicted signal transduction protein containing cyclic
           nucleotide-binding and CBS domains [Rhodobacter
           sphaeroides 2.4.1]
 gi|332276734|gb|EGJ22049.1| signal transduction protein [Rhodobacter sphaeroides WS8N]
          Length = 606

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F      G   +                       +  A   + +     + VV EG   
Sbjct: 125 FTRRRTQGYRASDLTTQKVADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVV-EGSAF 183

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+  +     L+ +  V +VM ++P  +  + L +  + ++ +  I  L VV+
Sbjct: 184 LGIVTTRDMTNKVVATGLDPSTPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G++   DL RF
Sbjct: 244 E-GRLVGMITQTDLTRF 259


>gi|75760299|ref|ZP_00740349.1| Cytosolic protein containing multiple CBS domains [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218899764|ref|YP_002448175.1| thioesterase family protein [Bacillus cereus G9842]
 gi|228903128|ref|ZP_04067264.1| hypothetical protein bthur0014_42940 [Bacillus thuringiensis IBL
           4222]
 gi|228941790|ref|ZP_04104337.1| hypothetical protein bthur0008_44260 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228967708|ref|ZP_04128727.1| hypothetical protein bthur0004_45000 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228974715|ref|ZP_04135281.1| hypothetical protein bthur0003_44680 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228981309|ref|ZP_04141609.1| hypothetical protein bthur0002_44700 [Bacillus thuringiensis Bt407]
 gi|74492209|gb|EAO55375.1| Cytosolic protein containing multiple CBS domains [Bacillus
           thuringiensis serovar israelensis ATCC 35646]
 gi|218544099|gb|ACK96493.1| thioesterase family protein [Bacillus cereus G9842]
 gi|228778509|gb|EEM26776.1| hypothetical protein bthur0002_44700 [Bacillus thuringiensis Bt407]
 gi|228785118|gb|EEM33131.1| hypothetical protein bthur0003_44680 [Bacillus thuringiensis
           serovar thuringiensis str. T01001]
 gi|228792000|gb|EEM39583.1| hypothetical protein bthur0004_45000 [Bacillus thuringiensis
           serovar sotto str. T04001]
 gi|228818002|gb|EEM64080.1| hypothetical protein bthur0008_44260 [Bacillus thuringiensis
           serovar berliner ATCC 10792]
 gi|228856537|gb|EEN01061.1| hypothetical protein bthur0014_42940 [Bacillus thuringiensis IBL
           4222]
 gi|326942395|gb|AEA18291.1| CBS domain-containing cytosolic protein [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 437

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPHDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|228910434|ref|ZP_04074249.1| hypothetical protein bthur0013_45810 [Bacillus thuringiensis IBL
           200]
 gi|228849200|gb|EEM94039.1| hypothetical protein bthur0013_45810 [Bacillus thuringiensis IBL
           200]
          Length = 437

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 51/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE +K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPHDTVQQWHAYNEETMHGRYPIVDENKKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|163119594|ref|YP_080221.2| hypothetical protein BL00411 [Bacillus licheniformis ATCC 14580]
 gi|145903104|gb|AAU24583.2| conserved protein YtoI [Bacillus licheniformis ATCC 14580]
          Length = 440

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE  K+ GI+T  D+         ++ +E VM KNP  ++  T +  A Q
Sbjct: 219 ETGHGRFPIVDEQMKIHGILTSKDV----AGYDRSVLIEKVMTKNPITVIGKTSVASAAQ 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL VVD+ QK IG++   D+L+ 
Sbjct: 275 MMVWEGIEVLPVVDERQKLIGMISRQDVLKA 305


>gi|319647338|ref|ZP_08001560.1| YtoI protein [Bacillus sp. BT1B_CT2]
 gi|317390685|gb|EFV71490.1| YtoI protein [Bacillus sp. BT1B_CT2]
          Length = 445

 Score = 83.4 bits (205), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE  K+ GI+T  D+         ++ +E VM KNP  ++  T +  A Q
Sbjct: 224 ETGHGRFPIVDEQMKIHGILTSKDV----AGYDRSVLIEKVMTKNPITVIGKTSVASAAQ 279

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL VVD+ QK IG++   D+L+ 
Sbjct: 280 MMVWEGIEVLPVVDERQKLIGMISRQDVLKA 310


>gi|196040016|ref|ZP_03107319.1| SIS domain protein [Bacillus cereus NVH0597-99]
 gi|196029275|gb|EDX67879.1| SIS domain protein [Bacillus cereus NVH0597-99]
          Length = 176

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ ++    R+   G G SG I +        TG        +       G++
Sbjct: 12  DTALEQAVKALQEA-NRIEFYGNGGSGIIATDAYHKFMRTGISCIAHTDSHFQIMGAGLL 70

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           +++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L         
Sbjct: 71  SKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLADITLYTSTRETEF 130

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESR 197
               +  +S + QL++ D L + L   R
Sbjct: 131 RTEAS--SSRLAQLSLIDTLYVGLSLQR 156


>gi|108803854|ref|YP_643791.1| CBS domain-containing protein [Rubrobacter xylanophilus DSM 9941]
 gi|108765097|gb|ABG03979.1| CBS domain containing membrane protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 216

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 49/119 (41%), Gaps = 10/119 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
               +  V       +A+ +  E+R   + V+ E  +L G++++ D+             
Sbjct: 8   MTREVVTVSPETRADEALALCRERRIRHLPVL-EDGRLVGVVSDRDLRSATPALGDPARA 66

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L  L V +VM +    +  D  + VA   +R+  I  L VV +  +  GI+   D++
Sbjct: 67  AALRRLRVGEVMSREVVTVRPDEPIEVAANRMREKGIGCLPVV-EDGRLAGIITTSDVM 124



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VED M +    +  +T    A+ L R+  I  L V+ +  + +G+V   DL
Sbjct: 4   VEDSMTREVVTVSPETRADEALALCRERRIRHLPVL-EDGRLVGVVSDRDL 53



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 36/93 (38%), Gaps = 3/93 (3%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
            + D   + ++  R+       +  P        +   +VM     +  V+   P+  A 
Sbjct: 38  VLEDGRLVGVVSDRDLRSATPALGDPARAAALRRLRVGEVM--SREVVTVRPDEPIEVAA 95

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + EK  GC+ VV E  +L GIIT  D+    
Sbjct: 96  NRMREKGIGCLPVV-EDGRLAGIITTSDVMETL 127


>gi|62701927|gb|AAX93000.1| CBS domain, putative [Oryza sativa Japonica Group]
          Length = 575

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +  G  + +A   ++ +R   V + D    L GI+T+ DI  R   + L         +M
Sbjct: 64  IPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIM 123

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P  ++ DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 124 TRTPVYVMSDTLAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 167



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 4/130 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
             L    S ++     + +V    P+  A   + E R   V +   G  L+GI T  D +
Sbjct: 214 RMLKPSLSTIISENTKVAIVSPWDPVCVAARKMHELRVNSVVIT-AGNSLQGIFTSKDVL 272

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   ++L+     VE VM  +P+    DT +  A+ ++R      + VVD   + +  +
Sbjct: 273 MRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMRDGKFLHIPVVDGEGRVVACL 332

Query: 331 HFLDLLRFGI 340
             L +    I
Sbjct: 333 DVLQITHAAI 342



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E T +  A Q +    +  +++ D      GIV   D+ +
Sbjct: 62  VTIPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAK 105


>gi|300853495|ref|YP_003778479.1| hypothetical protein CLJU_c02930 [Clostridium ljungdahlii DSM
           13528]
 gi|300433610|gb|ADK13377.1| conserved hypothetical protein containing CBS domain [Clostridium
           ljungdahlii DSM 13528]
          Length = 142

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS--VEDVMIKN 292
              +  A  I+ +   G V V  +  K+ GI+T+ DI  R+  +   T S  V D+M  N
Sbjct: 17  DDTVEKAAQIMQQNNIGAVPVC-KNGKVIGIVTDRDIAIRSASQSGGTESKFVRDIMSAN 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P     D  L  A +++    I  L +V++    +G+V   DL
Sbjct: 76  PVTGSPDMNLEDASRIMSDKQIRRLPIVENKN-VVGMVSLGDL 117



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D+M K+   + +D  +  A Q+++Q+NI  + V     K IGIV   D+
Sbjct: 1   MKVKDIMTKSVISLNDDDTVEKAAQIMQQNNIGAVPVC-KNGKVIGIVTDRDI 52


>gi|228993339|ref|ZP_04153255.1| hypothetical protein bpmyx0001_40710 [Bacillus pseudomycoides DSM
           12442]
 gi|228766407|gb|EEM15050.1| hypothetical protein bpmyx0001_40710 [Bacillus pseudomycoides DSM
           12442]
          Length = 437

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E   G   +VDE +K+ GI+T  D+            +E VM K P  +     +  A +
Sbjct: 219 ETMHGRYPIVDENKKVLGIVTSKDMIGI----AKETPIEKVMTKQPITVNGKMSVAAAAR 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L VVD+  +  GI+   D+L+ 
Sbjct: 275 MMVWEGIELLPVVDESNRLQGIISRQDVLQA 305


>gi|326422420|gb|EGD71821.1| Malate dehydrogenase [Candidatus Parvarchaeum acidiphilum
           ARMAN-4_'5-way FS']
          Length = 462

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/185 (18%), Positives = 69/185 (37%), Gaps = 15/185 (8%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
           ++   +              P  S+ M       +AIA+ +          ++H    + 
Sbjct: 23  NSRWQVDTSTYITDKIKLNIPLVSSNMDTVTEHIMAIAMAKVGGVG-----IIHRFNSIE 77

Query: 215 TLFVCASDVMHSGD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
              +  + V    +       +V     + +   +++EK+     VVD+  KL GIIT  
Sbjct: 78  NEVLEITRVKREQNIIIEKPYVVGKDFTIEELRNLVTEKKVTSFPVVDK-GKLIGIIT-- 134

Query: 271 DIFRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              R+F  ++     V ++M K+     +   L  A QL+ ++ I  L +VD      G+
Sbjct: 135 --RRDFEFEENQKKKVNELMTKDVITAHKGIPLNDAKQLMYKNKIEKLPLVDKEGNLTGM 192

Query: 330 VHFLD 334
           +   D
Sbjct: 193 ITSKD 197


>gi|269138124|ref|YP_003294824.1| putative DNA-binding transcriptional regulator [Edwardsiella tarda
           EIB202]
 gi|267983784|gb|ACY83613.1| putative DNA-binding transcriptional regulator [Edwardsiella tarda
           EIB202]
 gi|304558169|gb|ADM40833.1| putative RpiR-family transcriptional regulatory protein
           [Edwardsiella tarda FL6-60]
          Length = 279

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 85/181 (46%), Gaps = 5/181 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H ++++  ++     ++AEK  +++L+S+L      Q   A+  + + + R+VITG+G S
Sbjct: 84  HGILRHDPLKVVGEKLMAEK--IAALQSTLTINHEEQLQQALRMLLSAR-RIVITGLGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +    A+ L   G  ++    A         +   DL++ +S+SG   E+      AR
Sbjct: 141 GLVAKDFANKLMQIGLAAYAESDAHVQIVCAQAMQPQDLLMAISYSGERKEVNMAAATAR 200

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           R S  ++A+T  + + +   A + L    +  +        +S I Q A+ D L + +++
Sbjct: 201 RRSAQVLALTGFSPNPLQELASLTLYTVIDAHADQ--TTAISSRIAQSALTDLLYMGIVQ 258

Query: 196 S 196
            
Sbjct: 259 Q 259


>gi|15679010|ref|NP_276127.1| inosine-5'-monophosphate dehydrogenase related protein IX
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622093|gb|AAB85489.1| inosine-5'-monophosphate dehydrogenase related protein IX
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 284

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           A+ ++ +K    + VV +G ++L GIIT  D+     ++ +   +  +M +NP  +  D 
Sbjct: 26  ALELMRKKNVSGLPVVKKGTEELVGIITRSDLV----ENPDEEQIVLIMTRNPVTVSPDD 81

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VA + + ++NI  + VVD   + +GIV   DL+  G I
Sbjct: 82  DVRVAAERMLENNIRRVPVVDGD-RLVGIVTSYDLV-AGAI 120



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 2/115 (1%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLN 281
           V+    +   V     +  A   + E     V VVD G +L GI+T  D+      +   
Sbjct: 67  VLIMTRNPVTVSPDDDVRVAAERMLENNIRRVPVVD-GDRLVGIVTSYDLVAGAIAEMDI 125

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              VE+ M +N     + T L VA +++R   + VL+ +++  K  G++   D +
Sbjct: 126 QEPVENYMTRNIPTTWDRTPLNVAFEIMRYFRLKVLLTLNNRGKLSGVLTETDFI 180



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 285 VEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           V+++M +N   +       T A++L+R+ N+S L VV    ++ +GI+   DL+
Sbjct: 6   VKEIMSENIHYVTVPGNRAT-ALELMRKKNVSGLPVVKKGTEELVGIITRSDLV 58



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 25/162 (15%), Positives = 48/162 (29%), Gaps = 33/162 (20%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G +  + +      +   +IP      PL  A  I+   R   +  ++   KL G++TE
Sbjct: 117 AGAIAEMDIQEPVENYMTRNIPTTWDRTPLNVAFEIMRYFRLKVLLTLNNRGKLSGVLTE 176

Query: 270 GDIFRNFH------------------------------KDLNTLS---VEDVMIKNPKVI 296
            D                                    K+          DV   +    
Sbjct: 177 TDFINESEVVSESTVHNTSVGTEGDRWSWDSKNVLYVIKNQLKFPDKEARDVATTDIVTA 236

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              T +T   Q +++  I  + ++D     +G+    DL+  
Sbjct: 237 TTSTTVTSCAQKMKRRKIEQIPIIDYEGDLVGLARANDLINA 278


>gi|18423173|ref|NP_568736.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|22327688|ref|NP_680412.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|8777387|dbj|BAA96977.1| unnamed protein product [Arabidopsis thaliana]
 gi|9758762|dbj|BAB09138.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008572|gb|AED95955.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
 gi|332008588|gb|AED95971.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 548

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     L +A   ++ +R   + + D    L GI+T+ DI  +   K LN     V  VM
Sbjct: 74  VPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVM 133

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  +L DT+   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 134 TKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 177



 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVM 289
           V +   ++     + E +     V+ E  KL GI+T  D + R   ++L   T +VE VM
Sbjct: 243 VGLDETVLGVTMKMVEYQSSAAMVMVEN-KLVGILTSKDILMRVISQNLPQETTTVEKVM 301

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             NP+    D  +  A+ ++       L V+D     + ++  + +    +
Sbjct: 302 TPNPESATVDMAIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352


>gi|291563824|emb|CBL42640.1| inosine-5'-monophosphate dehydrogenase [butyrate-producing
           bacterium SS3/4]
          Length = 484

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 66/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPFMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDYSK-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  ++     E   +  A ++L +  +  L +VD+     G++   D+
Sbjct: 152 MTSEHLVTAKEGVTMEEAKRILAKARVEKLPIVDENFNLKGLITIKDI 199


>gi|229176609|ref|ZP_04304018.1| Transcriptional regulator, RpiR [Bacillus cereus MM3]
 gi|228606865|gb|EEK64278.1| Transcriptional regulator, RpiR [Bacillus cereus MM3]
          Length = 287

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 68/161 (42%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  + +YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAHYAKRQGATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|221640014|ref|YP_002526276.1| cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
 gi|221160795|gb|ACM01775.1| Cyclic nucleotide-binding protein [Rhodobacter sphaeroides KD131]
          Length = 611

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F      G   +                       +  A   + +     + VV EG   
Sbjct: 130 FTRRRTQGYRASDLTTQKVADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVV-EGSAF 188

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+  +     L+ +  V +VM ++P  +  + L +  + ++ +  I  L VV+
Sbjct: 189 LGIVTTRDMTNKVVATGLDPSTPVAEVMTRDPIALAPEALGSDILHVMLERRIGHLPVVE 248

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G++   DL RF
Sbjct: 249 E-GRLVGMITQTDLTRF 264


>gi|134099698|ref|YP_001105359.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
 gi|291008298|ref|ZP_06566271.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133912321|emb|CAM02434.1| putative signal-transduction protein with CBS domains
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 143

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 58/122 (47%), Gaps = 6/122 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G  +  ++    + + + +L+    G +AVV EG+ L GI++E D+ R   +   +
Sbjct: 7   LSKKGSDVATIRPTAAVSELLRMLAHHNIGAMAVVGEGEDLLGIVSERDVVRRLDERGAE 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L T +V ++M  +            ++ +++ +  I  L VV +    +GIV   D+++ 
Sbjct: 67  LLTATVAEIMTTSVITCTP-ADAVESLTEIMTERRIRHLPVV-EGGALVGIVSIGDVVKS 124

Query: 339 GI 340
            I
Sbjct: 125 RI 126


>gi|150390292|ref|YP_001320341.1| polynucleotide adenylyltransferase region [Alkaliphilus
           metalliredigens QYMF]
 gi|149950154|gb|ABR48682.1| Polynucleotide adenylyltransferase region [Alkaliphilus
           metalliredigens QYMF]
          Length = 875

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                +  V     + +   I+       + V+ EG ++ GII+  D+ +     L    
Sbjct: 312 MMSHPVKTVYEHMKIQEVNKIMLRYGHTGMPVL-EGDQMIGIISRTDVDKAIIHGLGHAP 370

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+  M KN K I   T L     LL ++NI  L VV +  + IGIV   D+L+ 
Sbjct: 371 VKGFMTKNVKTINPSTTLKEMNLLLTRNNIGRLPVV-EDNQLIGIVTRTDVLKI 423



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+  ++M    K + E   +    +++ ++  + + V++  Q  IGI+   D+ + 
Sbjct: 306 QLTAGEMMSHPVKTVYEHMKIQEVNKIMLRYGHTGMPVLEGDQM-IGIISRTDVDKA 361



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 24/66 (36%), Gaps = 1/66 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A        ++  +     L +   +L+    G + VV E  +L GI+T  
Sbjct: 360 KAIIHGLGHAPVKGFMTKNVKTINPSTTLKEMNLLLTRNNIGRLPVV-EDNQLIGIVTRT 418

Query: 271 DIFRNF 276
           D+ +  
Sbjct: 419 DVLKIM 424


>gi|332284097|ref|YP_004416008.1| inosine-5'-monophosphate dehydrogenase [Pusillimonas sp. T7-7]
 gi|330428050|gb|AEC19384.1| inosine-5'-monophosphate dehydrogenase [Pusillimonas sp. T7-7]
          Length = 486

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESQLAIAMAQEGGIG-----IIHKNLTADEQAREVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +  F  + VV EG KL GI+T  D+     +D   L + D+
Sbjct: 95  DPVTVTPTMKVRDAIDLQRQHGFSGLPVV-EGGKLVGIVTNRDLRF---EDRLDLPLRDI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+   +  G+    D+++
Sbjct: 151 MTPQERLITMDEGATLDEAQSLMHKHRLERVLIVNKNFQLRGLATVKDIVK 201


>gi|319790200|ref|YP_004151833.1| putative signal transduction protein with CBS domains [Thermovibrio
           ammonificans HB-1]
 gi|317114702|gb|ADU97192.1| putative signal transduction protein with CBS domains [Thermovibrio
           ammonificans HB-1]
          Length = 134

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 3/110 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLS 284
              + +++    +  A   + +K  G + V+ EG +  GIIT+ D+  R   ++L     
Sbjct: 8   RRKVVVIEPDDTVKLAAQRMEDKMVGSLVVI-EGDRPVGIITDRDLALRVIGRELPPDTP 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +++VM ++P  I ED       +  R+  +  L+VVD   K +G++   D
Sbjct: 67  IKEVMTRDPITIREDASFFELTKTFREAAVRRLIVVDKDGKLVGLISIDD 116



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V D++ +   VI  D  + +A Q +    +  L+V+ +  + +GI+   DL
Sbjct: 1   MPVRDLIRRKVVVIEPDDTVKLAAQRMEDKMVGSLVVI-EGDRPVGIITDRDL 52


>gi|291618402|ref|YP_003521144.1| GuaB [Pantoea ananatis LMG 20103]
 gi|291153432|gb|ADD78016.1| GuaB [Pantoea ananatis LMG 20103]
 gi|327394795|dbj|BAK12217.1| Inosine-5'-monophosphate dehydrogenase GuaB [Pantoea ananatis
           AJ13355]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEAGLAIALAQEGGLGFIHKNMSIDRQADEVRKVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV+   +L GIIT  D+   F  DL T  V  VM 
Sbjct: 98  QTVLPTTTLAEVKELTERNGFAGYPVVNADNELVGIITGRDVR--FVTDL-TQPVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLHRMHEKRVEKALVVDDSFHLLGMITVKDFQKA 204


>gi|262372502|ref|ZP_06065781.1| CBS domain-containing protein [Acinetobacter junii SH205]
 gi|262312527|gb|EEY93612.1| CBS domain-containing protein [Acinetobacter junii SH205]
          Length = 143

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +++AI I+++K  G + VV E +K+ GI +E D  R      +  N   V D+M
Sbjct: 19  ISPNATVLEAIKIMADKGVGAL-VVAEDEKVVGIFSERDYTRKIALMERSSNNTLVSDIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +  +   + L+   ++  L V+++  K +G +   DL++ 
Sbjct: 78  TSKVISVSLNNTVEECLNLMTDRHLRHLPVLENE-KLVGFISIGDLVKA 125



 Score = 39.5 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE D+       +  +     SD+M S      V +   + + + +++++    + V+ 
Sbjct: 52  FSERDYTRKIALMERSSNNTLVSDIMTSKVIS--VSLNNTVEECLNLMTDRHLRHLPVL- 108

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E +KL G I+ GD+ +   +D   L
Sbjct: 109 ENEKLVGFISIGDLVKAAMEDQRVL 133



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A++++    +  L VV + +K +GI    D  R 
Sbjct: 18  TISPNATVLEAIKIMADKGVGAL-VVAEDEKVVGIFSERDYTRK 60


>gi|330007830|ref|ZP_08306088.1| inosine-5'-monophosphate dehydrogenase [Klebsiella sp. MS 92-3]
 gi|328535318|gb|EGF61804.1| inosine-5'-monophosphate dehydrogenase [Klebsiella sp. MS 92-3]
          Length = 383

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 44/219 (20%), Positives = 73/219 (33%), Gaps = 13/219 (5%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  ++       I   A+T ++  +V  H+ +      L  +         P  SA M  
Sbjct: 14  LSTLVEILPMLRIAKEALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMDT 73

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L +
Sbjct: 74  VTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLRE 130

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E 
Sbjct: 131 VKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVREG 187

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V    + +  +   +VVD+     G++   D  + 
Sbjct: 188 ESREVVFAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 226


>gi|325271480|ref|ZP_08137998.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324103370|gb|EGC00699.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 645

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +     +     PL +A+ ++ E++ G + VVD  +   GI T  D+ +        L  
Sbjct: 183 AMRHPVVCNADTPLREAVRLMHEQQVGSIVVVDTQRYPTGIFTLRDLRQVVAAADAELGA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   M   P  +        A   + + +I+ + +V +  +  G+V   DL
Sbjct: 243 PIARHMTAKPFYLSPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVVSERDL 293



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V   DT L  A++L+ +  +  ++VVD  +   GI    DL
Sbjct: 176 NTPLGELAMRHPVVCNADTPLREAVRLMHEQQVGSIVVVDTQRYPTGIFTLRDL 229



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 23/65 (35%), Gaps = 1/65 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                     + A    H       +       DA   ++E+    V +V E  +L G++
Sbjct: 230 RQVVAAADAELGAPIARHMTAKPFYLSPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVV 288

Query: 268 TEGDI 272
           +E D+
Sbjct: 289 SERDL 293


>gi|322831713|ref|YP_004211740.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321166914|gb|ADW72613.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 285

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 79/194 (40%), Gaps = 6/194 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            Y+++ +           +S+ Q   +      + +    S +      +F+ A + +  
Sbjct: 76  IYYNYSEVANLHAEIEPGDSSEQLLEKVFRTSIQAIEETLSIVD---VSEFNRAADILFK 132

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +  + +  +G S  +   L+  L   G  +     A        +++ DD ++ +S SG
Sbjct: 133 AR-HIDLYAVGGSAAVARDLSHKLLKIGIKTTVYDDAHIMLMSAAVLSDDDAVVAISHSG 191

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   +  A R    +IAIT+  +S +A +A +VL    +        A   S I Q
Sbjct: 192 ATRAVNDPIKLAARNGAKVIAITNYAESPIARNAHVVLNSTSQGSHLLGENA--ASRIAQ 249

Query: 183 LAIGDALAIALLES 196
           L I DAL +A+ + 
Sbjct: 250 LNILDALFVAIAQK 263


>gi|260893297|ref|YP_003239394.1| Cl- channel voltage-gated family protein [Ammonifex degensii KC4]
 gi|260865438|gb|ACX52544.1| Cl- channel voltage-gated family protein [Ammonifex degensii KC4]
          Length = 598

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 3/121 (2%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF 276
                     +IPLV I   + +A  ++ +++   + +V  +   +L G+IT  DI R  
Sbjct: 457 NIKVKEVMTANIPLVTIHTSVAEAEELVKKQKIKGLPIVAGESNYQLLGVITREDIIRVP 516

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  +V  VM   P VI  +  L VA+ ++  ++I+ L VV++  K +G++   D++
Sbjct: 517 PLQRAETNVGQVMSAPPIVIGPNETLDVALTIMSDNDIAFLPVVEE-NKVVGLITRRDII 575

Query: 337 R 337
           R
Sbjct: 576 R 576



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 2/60 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLR 337
           L  + V++VM  N  ++   T +  A +L+++  I  L +V  +   + +G++   D++R
Sbjct: 455 LENIKVKEVMTANIPLVTIHTSVAEAEELVKKQKIKGLPIVAGESNYQLLGVITREDIIR 514



 Score = 39.5 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 6/78 (7%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  D   + P  +  T                ++     L  A+TI+S+     + VV+
Sbjct: 507 ITREDIIRVPPLQRAETNVGQV-----MSAPPIVIGPNETLDVALTIMSDNDIAFLPVVE 561

Query: 259 EGQKLKGIITEGDIFRNF 276
           E  K+ G+IT  DI R +
Sbjct: 562 EN-KVVGLITRRDIIRTY 578


>gi|260913038|ref|ZP_05919523.1| inosine-5'-monophosphate dehydrogenase [Pasteurella dagmatis ATCC
           43325]
 gi|260633028|gb|EEX51194.1| inosine-5'-monophosphate dehydrogenase [Pasteurella dagmatis ATCC
           43325]
          Length = 508

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 62/166 (37%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 62  NIPMLSAAMDTVTEAKLAISLAQEGGIGFIHKNMSIERQADRVRKVKKFESGIV---SDP 118

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVDE + L GIIT  D    F  DL+  +V D M 
Sbjct: 119 VTVSPTLSLSELANLVKKNGFASFPVVDENKNLVGIITGRDTR--FVTDLSK-TVADFMT 175

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  +  +        L+  H +  ++VV+D  K  G++   D
Sbjct: 176 PKDRLVTVKRNASRDEIFGLMHTHRVEKVLVVNDDFKLKGMITLKD 221


>gi|163741070|ref|ZP_02148462.1| inosine-5'-monophosphate dehydrogenase [Phaeobacter gallaeciensis
           2.10]
 gi|161385423|gb|EDQ09800.1| inosine-5'-monophosphate dehydrogenase [Phaeobacter gallaeciensis
           2.10]
          Length = 482

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    L         V         
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGG-----MGVIHKNLDLEEQARQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +    R     VVD+  ++ GI+T  D+        +   V  +
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDKEGRVVGIVTNRDMRFATD---DNTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  +++   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLALLHEPAELEEAKSMMKARRIEKLLVTDGDGKLTGLLTLKD 197



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD   + +GIV   D+
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDKEGRVVGIVTNRDM 137


>gi|76800670|ref|YP_325678.1| metalloprotease [Natronomonas pharaonis DSM 2160]
 gi|76556535|emb|CAI48106.1| probable metalloprotease/ CBS domain protein [Natronomonas
           pharaonis DSM 2160]
          Length = 396

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/120 (29%), Positives = 57/120 (47%), Gaps = 1/120 (0%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +DVM   + +  V+    L   +  + E+R     VV EG KL GI+T  DI     +
Sbjct: 260 RVADVMTPANEVRTVETTATLDAILDRMFEERHTGYPVV-EGGKLVGIVTLADIRNVHPE 318

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   V DVM ++ + +  DT    AM+ L QH++  L+V D+     G++   DL+  
Sbjct: 319 KRSETRVADVMSEDLEAVSPDTEAMDAMRQLAQHSVGRLVVTDEFGNLAGLLTRSDLVTA 378



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 41/124 (33%), Gaps = 19/124 (15%)

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRN--------------FSENDFYVLHPGGKL 213
           +     A     +   A  DA+   + E R+               +  D   +HP  + 
Sbjct: 262 ADVMTPANEVRTVETTATLDAILDRMFEERHTGYPVVEGGKLVGIVTLADIRNVHPEKRS 321

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T            + +  V      +DA+  L++   G + V DE   L G++T  D+ 
Sbjct: 322 ETRVADV-----MSEDLEAVSPDTEAMDAMRQLAQHSVGRLVVTDEFGNLAGLLTRSDLV 376

Query: 274 RNFH 277
              +
Sbjct: 377 TAMN 380



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 5/63 (7%)

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLL-RQHNISVLMVVDDCQKAIGIVHF 332
                  + V DVM      + +     L   +  +  + + +   VV +  K +GIV  
Sbjct: 252 LEAAFRGVRVADVMTPANEVRTVETTATLDAILDRMFEERH-TGYPVV-EGGKLVGIVTL 309

Query: 333 LDL 335
            D+
Sbjct: 310 ADI 312


>gi|238921024|ref|YP_002934539.1| inosine 5'-monophosphate dehydrogenase [Edwardsiella ictaluri
           93-146]
 gi|238870593|gb|ACR70304.1| inosine-5'-monophosphate dehydrogenase, putative [Edwardsiella
           ictaluri 93-146]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 64/181 (35%), Gaps = 10/181 (5%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVC 219
           L  +  +  H   P  SA M       LAIAL +     F   +  +     ++  +   
Sbjct: 30  LGTQLTATIHLNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMPIERQAEEVRRVKKH 89

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S V+        V  G  L +   +     F    VV E  +L GIIT  D+   F  D
Sbjct: 90  ESGVV---TDPQTVTPGTTLREVKALTERNGFAGYPVVTEDNQLVGIITGRDVR--FVTD 144

Query: 280 LNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V  VM        + E     V +Q + +  +   +VVDD     G++   D  +
Sbjct: 145 L-EQPVTAVMTPKARLVTVKEGEARDVVLQRMHEKRVEKALVVDDSFHLRGMITVKDFQK 203

Query: 338 F 338
            
Sbjct: 204 A 204


>gi|59801213|ref|YP_207925.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae FA
           1090]
 gi|240115629|ref|ZP_04729691.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID18]
 gi|240123481|ref|ZP_04736437.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID332]
 gi|268601309|ref|ZP_06135476.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID18]
 gi|268682110|ref|ZP_06148972.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID332]
 gi|59718108|gb|AAW89513.1| putative inosine-5'-monophosphate dehydrogenase [Neisseria
           gonorrhoeae FA 1090]
 gi|268585440|gb|EEZ50116.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID18]
 gi|268622394|gb|EEZ54794.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID332]
          Length = 487

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               V     + + + + ++++     + VV E  K+ GI+T  D+     ++   L V 
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVV-ENGKVVGIVTNRDLRF---ENRVDLPVS 150

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        + E T +  A +L+  + +  ++V+++  +  G++   D+L+
Sbjct: 151 AIMTPRERLVTVPEGTSIDEARELMHTYKVERVLVLNEKDELKGLITIKDILK 203


>gi|83595073|ref|YP_428825.1| signal transduction protein [Rhodospirillum rubrum ATCC 11170]
 gi|83577987|gb|ABC24538.1| Predicted signal-transduction protein containing CBS domains
           [Rhodospirillum rubrum ATCC 11170]
          Length = 148

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FR 274
           +       +    +I  V       +    L++ +     VV E   LKGIITE D+  R
Sbjct: 1   MQRRIVPDVVRDQTIFFVSAETTAREVARTLADNKI-AAVVVMEDGVLKGIITERDVTAR 59

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              K  D +++    +M  +P  +  +     A++++R      L VVD     +G+V  
Sbjct: 60  LVAKGGDPDSVMARAIMTPDPDTLAPEDTAEDALRMMRLRGYRHLPVVDGEG-VVGMVSI 118

Query: 333 LDL 335
            DL
Sbjct: 119 RDL 121


>gi|134294739|ref|YP_001118474.1| RpiR family transcriptional regulator [Burkholderia vietnamiensis
           G4]
 gi|134137896|gb|ABO53639.1| transcriptional regulator, RpiR family [Burkholderia vietnamiensis
           G4]
          Length = 282

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  + +   R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAI-ALLSHASRIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPHDVVVAISNTGRTRDIVDAARSALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|291532203|emb|CBL05316.1| Transcriptional regulators [Megamonas hypermegale ART12/1]
          Length = 234

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 61/132 (46%), Gaps = 1/132 (0%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +++LE ++ G        +V  +K  + R+   G+G SG +    A      G  + 
Sbjct: 102 ANNIATLEQTVSGLDEDILLKSVNMLKKAE-RIFFIGLGNSGFVADDSAYKFMRIGFNAR 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +  +      + ++  +D+++V+S SG S E+   +  A+R    LI ITS   +++  
Sbjct: 161 GIDNSHLIMLHMALLHENDVVVVISHSGESFEIIKAVELAKRNGTKLIVITSNRDTILKE 220

Query: 155 HADIVLTLPKEP 166
           +AD  + + +E 
Sbjct: 221 YADACIFMKQEN 232


>gi|240014134|ref|ZP_04721047.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           DGI18]
 gi|240016569|ref|ZP_04723109.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           FA6140]
 gi|240080758|ref|ZP_04725301.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           FA19]
 gi|240117922|ref|ZP_04731984.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID1]
 gi|240121696|ref|ZP_04734658.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           PID24-1]
 gi|268596878|ref|ZP_06131045.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae FA19]
 gi|268603635|ref|ZP_06137802.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae PID1]
 gi|268550666|gb|EEZ45685.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae FA19]
 gi|268587766|gb|EEZ52442.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae PID1]
          Length = 487

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               V     + + + + ++++     + VV E  K+ GI+T  D+     ++   L V 
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVV-ENGKVVGIVTNRDLRF---ENRVDLPVS 150

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        + E T +  A +L+  + +  ++V+++  +  G++   D+L+
Sbjct: 151 AIMTPRERLVTVPEGTSIDEARELMHTYKVERVLVLNEKDELKGLITIKDILK 203


>gi|239617963|ref|YP_002941285.1| CBS domain containing protein [Kosmotoga olearia TBF 19.5.1]
 gi|239506794|gb|ACR80281.1| CBS domain containing protein [Kosmotoga olearia TBF 19.5.1]
          Length = 866

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 2/128 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +             +  V    P+ +A  I++      + V+D   KL G+I   D+ 
Sbjct: 299 ENVLEFVRVKDIMSSPVRTVLADMPVSEAARIMANTGHTGLPVID-HGKLVGMIVWKDVQ 357

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     L    + ++M      +     +  AM+ + +  +   +VV +     GIV   
Sbjct: 358 KALKHGLANEKIREIMTTELVTVKPTDSIGEAMRKMVEKGVGRTLVV-ENGVLTGIVTRS 416

Query: 334 DLLRFGII 341
           D++R   I
Sbjct: 417 DIMRSRYI 424


>gi|150400602|ref|YP_001324368.1| CBS domain-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150013305|gb|ABR55756.1| CBS domain containing protein [Methanococcus aeolicus Nankai-3]
          Length = 139

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIK 291
                +I A  IL + +  C+ +VD  +K+ GIIT  DI  N   D       V DVM K
Sbjct: 21  SPDEGVIKAFEILLKHKISCLPIVDADKKIMGIITTTDIGYNLIIDKYTIDTKVSDVMTK 80

Query: 292 NPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLR 337
               +  +  +  A+  + +       I+ L VV++  K +GI+   D++R
Sbjct: 81  KVISVNPENTILDAINKMDEFGYSKEIINQLPVVEEDNKLVGIISDGDIIR 131



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 30/56 (53%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    ++++M K+      D  +  A ++L +H IS L +VD  +K +GI+   D+
Sbjct: 4   IFNKKIKEIMTKDIIYSSPDEGVIKAFEILLKHKISCLPIVDADKKIMGIITTTDI 59



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 5/55 (9%)

Query: 233 VKIGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     ++DAI  + E          + VV+E  KL GII++GDI R   K L  
Sbjct: 85  VNPENTILDAINKMDEFGYSKEIINQLPVVEEDNKLVGIISDGDIIRVLSKSLKK 139


>gi|91217847|ref|ZP_01254802.1| CBS domain protein [Psychroflexus torquis ATCC 700755]
 gi|91184048|gb|EAS70436.1| CBS domain protein [Psychroflexus torquis ATCC 700755]
          Length = 157

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 60/140 (42%), Gaps = 7/140 (5%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
              G++       +       ++ L      +I+ + IL + R     VVD+ +++ GII
Sbjct: 9   QQVGEVNKQAEKITVRDCMSQNMILFNKAQSIIEVVEILIKFRVSGGPVVDDQKRVIGII 68

Query: 268 TEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +EGD        R ++  +  +SVE  M K    I  D  L  A  L  +       VV+
Sbjct: 69  SEGDCVKQISESRYYNMPMEDVSVEKYMSKEVNTISPDVSLFDAANLFLKSKRRRFPVVE 128

Query: 322 DCQKAIGIVHFLDLLRFGII 341
           +  + IGIV   D+LR  ++
Sbjct: 129 ND-RIIGIVSQKDILRAALM 147


>gi|238008544|gb|ACR35307.1| unknown [Zea mays]
          Length = 156

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 55/144 (38%), Gaps = 29/144 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
             + + +VK    + DA+ +L + R     V+D+   L G++++ D+             
Sbjct: 3   KREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLLALDTISGAGPAE 62

Query: 274 -----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                            +      N   + DVM   P V+ E T L  A +LL       
Sbjct: 63  ADIFPEVDSTWKTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRR 122

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           L VVD   K +GI+   ++++  +
Sbjct: 123 LPVVDSSGKLVGIITRGNVVQAAL 146



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M K     V+   T +  A+++L +H IS   V+DD    +G+V   DLL
Sbjct: 1   MTKREELHVVKPTTSVDDALEMLVKHRISGFPVIDDDWNLVGVVSDYDLL 50



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 18/71 (25%), Positives = 29/71 (40%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
              H   KL +             +  +V+    L DA  +L   ++  + VVD   KL 
Sbjct: 74  KTFHEIQKLLSKTNGKVIADVMTPAPLVVRETTNLEDAARLLLVTKYRRLPVVDSSGKLV 133

Query: 265 GIITEGDIFRN 275
           GIIT G++ + 
Sbjct: 134 GIITRGNVVQA 144


>gi|330816985|ref|YP_004360690.1| signal-transduction protein [Burkholderia gladioli BSR3]
 gi|327369378|gb|AEA60734.1| signal-transduction protein [Burkholderia gladioli BSR3]
          Length = 230

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/138 (21%), Positives = 54/138 (39%), Gaps = 26/138 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
               +   +    + +A  +L++     + V+D   KL GI++EGD+ R +         
Sbjct: 7   MTPEVIHARPEMSIREAAALLAKHSISALPVLDSDGKLVGIVSEGDLLRRYEIGTGDRHR 66

Query: 281 --------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                               +  SV+DVM      + EDT L    ++L +H I  + V+
Sbjct: 67  SWWLQLLTSNRELASEYVKEHERSVKDVMTAEVVTVYEDTPLADIAEVLERHRIKRVPVM 126

Query: 321 DDCQKAIGIVHFLDLLRF 338
               +  GIV   +L+R 
Sbjct: 127 -KNGRMTGIVSRANLVRA 143



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/53 (37%), Positives = 26/53 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             DVM         +  +  A  LL +H+IS L V+D   K +GIV   DLLR
Sbjct: 3   ACDVMTPEVIHARPEMSIREAAALLAKHSISALPVLDSDGKLVGIVSEGDLLR 55


>gi|227112675|ref|ZP_03826331.1| inositol-5'-monophosphate dehydrogenase [Pectobacterium carotovorum
           subsp. brasiliensis PBR1692]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---VDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV +  +L GIIT  D+   F  DL    V   M 
Sbjct: 98  QTVTPETTLREMKELTERNGFAGYPVVAKDNELVGIITGRDVR--FVTDL-EKPVSAFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +V+DD    IG++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQKMHEKRVEKALVIDDQFHLIGMITVKDFQKA 204


>gi|204929539|ref|ZP_03220613.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|204321258|gb|EDZ06458.1| inosine-5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIELQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 204


>gi|210624234|ref|ZP_03294262.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
 gi|210153128|gb|EEA84134.1| hypothetical protein CLOHIR_02218 [Clostridium hiranonis DSM 13275]
          Length = 155

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 60/149 (40%), Gaps = 27/149 (18%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--- 272
           +             +  VK    + D   +L + + G + VVDE  K+ GII+E DI   
Sbjct: 1   MMNDLKAKEIMTVDVKTVKKDDTVSDVAKMLIQDKIGGLPVVDEDNKVIGIISETDILKK 60

Query: 273 ---------------------FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQL 308
                                 +N  KDL  +    VED+M ++   + ED        +
Sbjct: 61  EKYIEPPRVINFLQGLIFLDDMKNLEKDLKRIAAYKVEDLMTEDIVTVHEDDKFDDVANV 120

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + + +I+ + VVDD  K  GI+   D+++
Sbjct: 121 MIKKSINRVPVVDDDGKIKGIICRYDIIK 149



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             + I  V       D   ++ +K    V VVD+  K+KGII   DI ++ + D
Sbjct: 101 MTEDIVTVHEDDKFDDVANVMIKKSINRVPVVDDDGKIKGIICRYDIIKSLYGD 154


>gi|311033292|ref|ZP_07711382.1| Multidomain protein (contains CAP-ED, 2CBS and a predicted
           nucleotidyltransferase domains) [Bacillus sp. m3-13]
          Length = 652

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 2/123 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFH 277
              D+M    ++   K    +      LS+      AV+    K++GI+T  D + R   
Sbjct: 181 RVQDIMLPKTTVIQAKPTDTIQSVAENLSQHTKKTAAVILNNNKIQGIVTMHDFVNRVIT 240

Query: 278 KDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +NT   ++ +M + P  +        A+  +  + I  L V  +  +  G+V   DLL
Sbjct: 241 RGINTQDQIQTIMTEKPITVPRTAYYYEALTAMLLNGIKHLPVTTENNQLAGLVTMTDLL 300

Query: 337 RFG 339
           +  
Sbjct: 301 QAK 303


>gi|262276499|ref|ZP_06054308.1| inosine-5'-monophosphate dehydrogenase [Grimontia hollisae CIP
           101886]
 gi|262220307|gb|EEY71623.1| inosine-5'-monophosphate dehydrogenase [Grimontia hollisae CIP
           101886]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPLISAAMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEQVRLVKIFEAGVV---SNP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D   +  +  F    VV E  +L GIIT  D+   F  DL  L V +VM 
Sbjct: 98  ITVTPEQTIADVKALTEKHGFAGFPVVTESNELVGIITGRDVR--FVTDLG-LKVAEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        +L+++H +  ++VV+D     G++   D  + 
Sbjct: 155 PKERLATVKEGASPEEVQKLMQKHRVEKILVVNDDHHIAGMITAKDFQKA 204


>gi|240128180|ref|ZP_04740841.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268686578|ref|ZP_06153440.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-93-1035]
 gi|268626862|gb|EEZ59262.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-93-1035]
          Length = 487

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  + +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTYKVERVLVLNEKDELKGLITIKDILK 203


>gi|158314906|ref|YP_001507414.1| signal-transduction protein [Frankia sp. EAN1pec]
 gi|158110311|gb|ABW12508.1| putative signal-transduction protein with CBS domains [Frankia sp.
           EAN1pec]
          Length = 139

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNT 282
              +   V +  P+ +A   +     G V V+D   ++ GI+T+ DI  R     +D   
Sbjct: 9   MTRNPATVGMDQPIAEAARRMKTVNAGDVIVLDNTGRVAGIVTDRDITLRVVAEGRDPER 68

Query: 283 LSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +V        I  DT    A+QL+R+ +I  L VVD   + +G++   DL R 
Sbjct: 69  TATREVCTQTGLITIAPDTTTDTAVQLIRERHIRRLPVVDK-GRPVGVISLGDLARA 124



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM +NP  +  D  +  A + ++  N   ++V+D+  +  GIV   D+ 
Sbjct: 4   TVADVMTRNPATVGMDQPIAEAARRMKTVNAGDVIVLDNTGRVAGIVTDRDIT 56



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              A+  + +   +  +        A+ ++ E+    + VVD+  +  G+I+ GD+ R  
Sbjct: 67  ERTATREVCTQTGLITIAPDTTTDTAVQLIRERHIRRLPVVDK-GRPVGVISLGDLARAL 125

Query: 277 H 277
            
Sbjct: 126 D 126


>gi|229165760|ref|ZP_04293528.1| Transcriptional regulator, RpiR [Bacillus cereus AH621]
 gi|228617761|gb|EEK74818.1| Transcriptional regulator, RpiR [Bacillus cereus AH621]
          Length = 287

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA++    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKKRGATVIAITKLDQSSPLYKAAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|226227050|ref|YP_002761156.1| hypothetical protein GAU_1644 [Gemmatimonas aurantiaca T-27]
 gi|226090241|dbj|BAH38686.1| hypothetical protein [Gemmatimonas aurantiaca T-27]
          Length = 297

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 46/128 (35%), Gaps = 16/128 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
                  V    PL  A+  +     G + VVD   ++ G+++E ++ R+          
Sbjct: 167 MTVQPRTVGPDAPLKSAVLEMVRSGLGGLPVVDADNRVVGMLSERELLRDLVSRYLPRAG 226

Query: 277 ------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                        +V D+M +    +  D  L     L+   ++  + VV    + +G +
Sbjct: 227 GVATPQPPTTARRTVSDLMTRQVLCVAPDQPLAEVASLMLNKDVDRVPVV-KNDRLVGFL 285

Query: 331 HFLDLLRF 338
              D++R 
Sbjct: 286 TRGDIVRK 293



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 29/56 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+V ++M   P+ +  D  L  A+  + +  +  L VVD   + +G++   +LLR
Sbjct: 160 QLTVRELMTVQPRTVGPDAPLKSAVLEMVRSGLGGLPVVDADNRVVGMLSERELLR 215



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    PL +  +++  K    V VV +  +L G +T GDI R  
Sbjct: 252 VAPDQPLAEVASLMLNKDVDRVPVV-KNDRLVGFLTRGDIVRKL 294


>gi|15921048|ref|NP_376717.1| hypothetical protein ST0813 [Sulfolobus tokodaii str. 7]
 gi|15621832|dbj|BAB65826.1| 274aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 274

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 56/113 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     ++DA+T++  + FG + VV+E +K+ GI+TE ++   F       SV
Sbjct: 81  MTPNPVYVYENDDVLDALTLMVARNFGSLPVVNEVKKVTGIVTEREMLLIFQDLDQLFSV 140

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M K    + ED  +  A +L+ +     L V+++  + IGI+   D L+ 
Sbjct: 141 KKFMTKRVTSVYEDVSVFDATKLMIKRGFRRLPVINESGEVIGIITAADSLKL 193



 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--------IFRNFHKDLNTLS 284
           V     + DA  ++ ++ F  + V++E  ++ GIIT  D        I +N  +      
Sbjct: 151 VYEDVSVFDATKLMIKRGFRRLPVINESGEVIGIITAADSLKLLTKTILKNEPEMFFNKK 210

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++V       I  +  +  A   +    I  L+++D   + +GI+   DL+
Sbjct: 211 VKEVATNEIYSIDPEKSINEAAATMLMKKIGSLLILDSKNRPLGIITERDLI 262



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/123 (26%), Positives = 55/123 (44%), Gaps = 14/123 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              + P + +   L++A   ++EK  G V V  E  ++KGII+  D+             
Sbjct: 8   MITNPPTISVSSKLLEAFKKVNEKGIGRVIV--EDNEIKGIISTRDLLNYVVERCEKGCD 65

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R     L    V+ VM  NP  + E+  +  A+ L+   N   L VV++ +K  GIV   
Sbjct: 66  RGDIFALVDKDVKYVMTPNPVYVYENDDVLDALTLMVARNFGSLPVVNEVKKVTGIVTER 125

Query: 334 DLL 336
           ++L
Sbjct: 126 EML 128



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +F        + + I  +     + +A   +  K+ G + ++D   +  GIITE D+  
Sbjct: 204 EMFFNKKVKEVATNEIYSIDPEKSINEAAATMLMKKIGSLLILDSKNRPLGIITERDLII 263

Query: 275 NFHKDLNTLS 284
             H  L+  +
Sbjct: 264 ALHYQLHLKT 273



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+ +MI NP  I   + L  A + + +  I  ++V  +  +  GI+   DLL
Sbjct: 4   VKTLMITNPPTISVSSKLLEAFKKVNEKGIGRVIV--EDNEIKGIISTRDLL 53


>gi|159046097|ref|YP_001534891.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dinoroseobacter shibae DFL 12]
 gi|157913857|gb|ABV95290.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dinoroseobacter shibae DFL 12]
          Length = 605

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIK 291
           +     +  A  ++  K+   +AV+ EG +L GI+T  D+ R   + L N   V +VM +
Sbjct: 154 ITADATIQRAAHLMHAKKVSSLAVL-EGGRLVGIVTVRDMARVVSEGLANDAPVSEVMAR 212

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  D L +  +  + +  I  L + D     +GIV   DL+RF
Sbjct: 213 KIISLPPDALGSDVLHTMLERRIGHLPITDK-GTLVGIVTQTDLIRF 258



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DL T  + ++M +    I  D  +  A  L+    +S L V+ +  + +GIV   D+ R
Sbjct: 137 DLATARISELMTRQVLGITADATIQRAAHLMHAKKVSSLAVL-EGGRLVGIVTVRDMAR 194


>gi|23016905|ref|ZP_00056657.1| COG1208: Nucleoside-diphosphate-sugar pyrophosphorylase involved in
           lipopolysaccharide biosynthesis/translation initiation
           factor 2B, gamma/epsilon subunits
           (eIF-2Bgamma/eIF-2Bepsilon) [Magnetospirillum
           magnetotacticum MS-1]
          Length = 353

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVM 289
            LV    P++D I IL       V VVD  ++L G IT+GDI R   + L        +M
Sbjct: 7   ILVGPTVPILDVIKILDRFAAQIVLVVDSDRRLLGTITDGDIRRGILRGLVLDEPATAIM 66

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              P   L  +     + L+R   +  L VVD     +G+
Sbjct: 67  NPKPLTALPSSSPQERLALIRSRRLRHLPVVDAGGVLVGL 106


>gi|307596625|ref|YP_003902942.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307551826|gb|ADN51891.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 128

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
            +   P+  A+  +     G V V+DE +K  GI TE D+ R   + ++    +  VM +
Sbjct: 14  CRSTDPITCAVAKMYMHNVGSVLVIDEDEKPVGIFTERDLVRIVAEGISLDTPLMKVMSR 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     +  A   + ++NI  L VV++  +A+G+V   DL+R 
Sbjct: 74  KLITANTSESVISAAMKMIENNIRHLPVVEE-GRAVGMVSIRDLVRA 119



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 29/56 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +++++            +T A+  +  HN+  ++V+D+ +K +GI    DL+R 
Sbjct: 1   MRIKELIRDGVISCRSTDPITCAVAKMYMHNVGSVLVIDEDEKPVGIFTERDLVRI 56


>gi|88813488|ref|ZP_01128723.1| inosine-5'-monophosphate dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88789278|gb|EAR20410.1| inosine-5'-monophosphate dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 488

 Score = 83.4 bits (205), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL E          ++H    +    +    V         
Sbjct: 40  NLPLVSAAMDTVTEARLAIALAEQGGIG-----IIHKNMTIEQQALEVLRVKKFESGVIK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + ++       V VV++   L GI+T  D+     +  +   V   
Sbjct: 95  EPITVGPQTSIREVLALMGVHCISGVPVVEDEN-LVGIVTSRDLRF---ESRHEAPVTAA 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E        QLL Q+ I  L+VV++  +  G++   D+ + 
Sbjct: 151 MTPKDRLVTVREGAERDEIQQLLHQYRIEKLLVVNEDFQLRGMITVKDIQKA 202


>gi|269837132|ref|YP_003319360.1| putative signal transduction protein with CBS domains
           [Sphaerobacter thermophilus DSM 20745]
 gi|269786395|gb|ACZ38538.1| putative signal transduction protein with CBS domains
           [Sphaerobacter thermophilus DSM 20745]
          Length = 161

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 52/124 (41%), Gaps = 6/124 (4%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +  +       ++  V     + +   +L   R   + VVDE   L GI++E D+  
Sbjct: 3   QTTMEVTVKEIMTPNVITVFPQTGVDEVARLLYAHRISGMPVVDETGALLGIVSEFDVIS 62

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +     +  D+M ++   +LED L      +L + N+  + V  +  + +GIV   D
Sbjct: 63  KKGR-----TAADIMTRDVISVLEDALAEQVAGILTERNVRRVPVTSE-GRLVGIVSRSD 116

Query: 335 LLRF 338
           L+R 
Sbjct: 117 LVRL 120



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 30/64 (46%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +    ++V+++M  N   +   T +    +LL  H IS + VVD+    +GIV   D+
Sbjct: 1   MTQTTMEVTVKEIMTPNVITVFPQTGVDEVARLLYAHRISGMPVVDETGALLGIVSEFDV 60

Query: 336 LRFG 339
           +   
Sbjct: 61  ISKK 64


>gi|124028009|ref|YP_001013329.1| hypothetical protein Hbut_1147 [Hyperthermus butylicus DSM 5456]
 gi|123978703|gb|ABM80984.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 324

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 1/136 (0%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D  V   G  +    +          +   V +   L   + ++  +  G + V+     
Sbjct: 109 DIVVKRHGRNIYAALLKEYVSSIMNPNPVYVTVDDKLTKILEVMVTRNVGVLPVLYHDGT 168

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + GIITE DI     +      V +VM  N   I  D  L  AM+ + ++ +  L +V  
Sbjct: 169 IWGIITEHDIVGYLAEKTVGRRVSEVMTTNVITISVDATLKEAMETMIKYGVRRLPIV-A 227

Query: 323 CQKAIGIVHFLDLLRF 338
                G++   D++RF
Sbjct: 228 DNSVWGMITAKDIVRF 243



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 54/140 (38%), Gaps = 15/140 (10%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G L    V          ++  + +   L +A+  + +     + +V     + G+IT 
Sbjct: 179 VGYLAEKTVGRRVSEVMTTNVITISVDATLKEAMETMIKYGVRRLPIV-ADNSVWGMITA 237

Query: 270 GDIFRNFH-------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            DI R F              ++     V+ V + +   I  D  +  A +L+    +S 
Sbjct: 238 KDIVRFFGSHEVFTFVETGNVEEALATPVKIVGVNDYVTISPDADVGEAAKLMIDKGVSS 297

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L+VV++  K  GI+   D+L
Sbjct: 298 LLVVEE-GKLTGIITERDIL 316



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 28/78 (35%), Gaps = 3/78 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S   F  +  G     L      V  +      +     + +A  ++ +K    + VV E
Sbjct: 246 SHEVFTFVETGNVEEALATPVKIVGVNDYVT--ISPDADVGEAAKLMIDKGVSSLLVV-E 302

Query: 260 GQKLKGIITEGDIFRNFH 277
             KL GIITE DI     
Sbjct: 303 EGKLTGIITERDILYALA 320


>gi|114777703|ref|ZP_01452663.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
           PV-1]
 gi|114551919|gb|EAU54453.1| inosine-5'-monophosphate dehydrogenase [Mariprofundus ferrooxydans
           PV-1]
          Length = 491

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 59/169 (34%), Gaps = 6/169 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      A AIAL +           L P  +   +                
Sbjct: 42  NIPVLSAAMDTVTESAAAIALAQEGGIGVIH-KNLTPAEQAAEVRRVKRFEAGVVQEPLT 100

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    L     + +E  F    V D   K+ GI+T  DI   F +D     V ++M   
Sbjct: 101 VRPDMTLEQVRQLAAENNFSGFPVQDADGKVCGIVTNRDIR--FERDPGK-KVSEMMTPR 157

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
               V+     L V  +L R+H I  L VVDD     G++   D+ +  
Sbjct: 158 DRLVVVAHGVELDVCKELFREHRIEKLPVVDDAGYLKGMITVRDIEKSK 206


>gi|83589609|ref|YP_429618.1| nucleotidyl transferase [Moorella thermoacetica ATCC 39073]
 gi|83572523|gb|ABC19075.1| Nucleotidyl transferase [Moorella thermoacetica ATCC 39073]
          Length = 354

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
            G  L  A+  +       + V D  + L GIIT+GDI R   +  +  + V  VM   P
Sbjct: 15  PGESLKLALPRMDGAGLQVLLVGDTERHLLGIITDGDIRRALLRGESLDVPVGQVMQARP 74

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           KV+     L  A +L+  HNI  + +V++  + + ++ ++DL    +
Sbjct: 75  KVLPAGVSLDAARRLMLTHNIRHIPLVNNEHQVVDLLLWIDLFGSKV 121


>gi|320161957|ref|YP_004175182.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
 gi|319995811|dbj|BAJ64582.1| hypothetical protein ANT_25560 [Anaerolinea thermophila UNI-1]
          Length = 140

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +     + DA+ ++++K  G + VV E  K+ GII+E D  R      K      V ++M
Sbjct: 19  IGPDATVFDALRMMADKDVGAL-VVMENDKVVGIISERDYARKIILHGKSSKETLVREIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N   +  D  +  AM+++    +  L V+ + +  +G++   D+++
Sbjct: 78  STNLYTVHPDQTVEEAMEIMTNKRVRHLPVM-EGETLLGMISIGDVVK 124



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 33/78 (42%), Gaps = 3/78 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+         G              ++  V     + +A+ I++ KR   + V+ 
Sbjct: 52  ISERDYA--RKIILHGKSSKETLVREIMSTNLYTVHPDQTVEEAMEIMTNKRVRHLPVM- 108

Query: 259 EGQKLKGIITEGDIFRNF 276
           EG+ L G+I+ GD+ +N 
Sbjct: 109 EGETLLGMISIGDVVKNI 126


>gi|289524464|ref|ZP_06441318.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
 gi|289502296|gb|EFD23460.1| inosine-5'-monophosphate dehydrogenase [Anaerobaculum
           hydrogeniformans ATCC BAA-1850]
          Length = 305

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 4/93 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAM 306
                 V +VD   KL GIIT  D+      D    S++DVM K N  V    T L  A 
Sbjct: 2   HYHISGVPIVDAEMKLVGIITNRDLRFITDYD---QSIKDVMTKENLIVSHIGTTLEDAK 58

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +L +H +  L +VD      G++   D+++  
Sbjct: 59  AILMKHKVEKLPIVDGEGHLKGLITIKDIIKAK 91


>gi|229192812|ref|ZP_04319770.1| hypothetical protein bcere0002_44630 [Bacillus cereus ATCC 10876]
 gi|228590651|gb|EEK48512.1| hypothetical protein bcere0002_44630 [Bacillus cereus ATCC 10876]
          Length = 437

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPSDTVQQWHAYNEETMHGRYPIVDESNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|227874169|ref|ZP_03992373.1| IMP dehydrogenase [Oribacterium sinus F0268]
 gi|227839990|gb|EEJ50416.1| IMP dehydrogenase [Oribacterium sinus F0268]
          Length = 487

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI +            ++H    +         V  S + +  
Sbjct: 41  NIPFISAGMDTVTEHQMAIGMARCGGIG-----IIHKNMSISAQAEEVDMVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ +   V +  EG+KL GIIT  D+   F +D +   +   
Sbjct: 96  DPFSLTKDHSLKDANDLMAKFKISGVPIT-EGKKLIGIITNRDLV--FEEDFDR-PISAC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E T L  A  +L +  +  L +VDD     G++   D+
Sbjct: 152 MTSENLVTAKEGTTLEEAKSILARAKVEKLPIVDDEGNLKGLITIKDI 199



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I +P  + +D  L  A  L+ +  IS + +  + +K IGI+   DL+
Sbjct: 94  ITDPFSLTKDHSLKDANDLMAKFKISGVPIT-EGKKLIGIITNRDLV 139


>gi|39997293|ref|NP_953244.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
           PCA]
 gi|39984183|gb|AAR35571.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
           PCA]
 gi|298506231|gb|ADI84954.1| inosine-5'-monophosphate dehydrogenase [Geobacter sulfurreducens
           KN400]
          Length = 491

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M        AI +            ++H    +    +    V  S   + +
Sbjct: 42  NIPLVSAAMDTVTEARTAICMAREGGLG-----IIHKNLTIEEQAMEVDKVKKSESGMIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + +A+ I+ + R   V V +   KL GI+T  D+   F  +L  L +   
Sbjct: 97  DPITMRPNQKIHEALAIMEKYRISGVPVTNSKGKLVGILTNRDLR--FETNL-DLPISAR 153

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K     +   T L  A + L+   +  L+VVD+ +   G++   D+
Sbjct: 154 MTKRRLVTVAVGTTLEEAKEHLKHTRVEKLLVVDEEKNLKGLITIKDI 201


>gi|237732485|ref|ZP_04562966.1| inositol-5-monophosphate dehydrogenase [Citrobacter sp. 30_2]
 gi|226908024|gb|EEH93942.1| inositol-5-monophosphate dehydrogenase [Citrobacter sp. 30_2]
          Length = 525

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 76/220 (34%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 34  EILPMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMD 87

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    S V+        V     L 
Sbjct: 88  TVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLR 144

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILE 298
           +   +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E
Sbjct: 145 EVKELTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVRE 201

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V    + +  +   +VVDD    +G++   D  + 
Sbjct: 202 GEARDVVFAKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 241


>gi|126460003|ref|YP_001056281.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249724|gb|ABO08815.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 141

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           +    + +A  I++E+R G + V+ +G +L G+++E DI R   + ++       +    
Sbjct: 15  EADISIREAARIMAERRIG-LLVLTKGGELYGVVSERDIVRAVAEGVDVEKPASSIATTR 73

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  D  ++ A +L R+H I  L VV    +  G++   DL+R 
Sbjct: 74  IVTVDADADISEAAELFRRHGIRHL-VVTKGGELYGVLSIRDLVRE 118



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V     + P     D  +  A +++ +  I  L+V+    +  G+V   D++R 
Sbjct: 1   MRVAAFASRPPITAEADISIREAARIMAERRIG-LLVLTKGGELYGVVSERDIVRA 55


>gi|95930304|ref|ZP_01313041.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
           684]
 gi|95133556|gb|EAT15218.1| cyclic nucleotide-binding protein [Desulfuromonas acetoxidans DSM
           684]
          Length = 637

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVED 287
             +      +   ++S+ +   V V D+G  + G++T  D+          D  T++  +
Sbjct: 172 HCRTEASAREIAELMSQHQVRSVVVTDDGGSMVGMVTCRDVIGKVLAIKGADAETITASE 231

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M ++P  +   T +  AM  +  H +  L +VD   + +G+V   DLLR+
Sbjct: 232 LMAEDPVSMSPQTYMYEAMAYMSGHKLKHLPIVD-GGELVGMVSMSDLLRY 281



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    + ++M         +       +L+ QH +  ++V DD    +G+V   D+
Sbjct: 153 MESYPFKKRLSEIMSAPVLHCRTEASAREIAELMSQHQVRSVVVTDDGGSMVGMVTCRDV 212

Query: 336 L 336
           +
Sbjct: 213 I 213


>gi|238918941|ref|YP_002932455.1| hypothetical protein NT01EI_1008 [Edwardsiella ictaluri 93-146]
 gi|238868509|gb|ACR68220.1| conserved hypothetical protein [Edwardsiella ictaluri 93-146]
          Length = 296

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A+ S+++E   L  +          Q   AV+ I+     + I G+G SG    ++ 
Sbjct: 113 LQSAINSVLSETLNLLDMA---------QVQAAVDAIRQA-NYLFICGVGSSGITAEEMK 162

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           + L   G            +    ++   D+ I +S SG+S E    L  A+      IA
Sbjct: 163 NKLMRIGYRVNGTSNNHFMYMQASLLQPGDVAIAISHSGASPETVHTLKLAQEAGACTIA 222

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T    S +  HADI L    +            +   QL + D L   L+++
Sbjct: 223 LTHNLGSALMRHADISLINGNKQGKLQGDSI--GTKTAQLFVLDLLYTLLVQA 273


>gi|15921060|ref|NP_376729.1| hypothetical protein ST0826 [Sulfolobus tokodaii str. 7]
 gi|15621844|dbj|BAB65838.1| 127aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 127

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 3/109 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            V+    + +   ++ E+  G V V  E  + KGI T+ D  R F   LN      +   
Sbjct: 14  QVEANTSIQEVCKLMMERGVGSVIVT-ENGEPKGIFTDRDAVRAFSMGLNPTDEVRLAST 72

Query: 292 --NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   + EDT + VA+ ++ ++ I  L V D   K IG+    D+ + 
Sbjct: 73  MGNLITVDEDTDVFVAIDIMTKNKIRHLPVKDKEGKIIGMFAITDISKA 121



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  +  ++  V     +  AI I+++ +   + V D+  K+ G+    DI +  H
Sbjct: 68  RLASTMGNLITVDEDTDVFVAIDIMTKNKIRHLPVKDKEGKIIGMFAITDISKALH 123


>gi|163938736|ref|YP_001643620.1| RpiR family transcriptional regulator [Bacillus weihenstephanensis
           KBAB4]
 gi|229131758|ref|ZP_04260633.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST196]
 gi|163860933|gb|ABY41992.1| transcriptional regulator, RpiR family [Bacillus weihenstephanensis
           KBAB4]
 gi|228651714|gb|EEL07676.1| Transcriptional regulator, RpiR [Bacillus cereus BDRD-ST196]
          Length = 287

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA++    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKKRGATVIAITKLDQSSPLYKAAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|288931695|ref|YP_003435755.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288893943|gb|ADC65480.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 175

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 51/114 (44%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               + + +    ++ A   + E   G + VV E  +  GI+TE DI R     +K  + 
Sbjct: 11  MTREVCVARKDESVLKASRRMIEFGVGSIVVV-ENGRPVGIVTESDIIRKVVARNKVPSE 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +E++M      I     +  A  ++ +  I  L VVD  +K +GIV   D+L
Sbjct: 70  VKLEEIMTYPIITIKPTASIREAANIMLKKGIRRLPVVD-GEKLVGIVTDTDIL 122



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V+++M +   V  +D  +  A + + +  +  ++VV +  + +GIV   D++R 
Sbjct: 4   DIPVKEIMTREVCVARKDESVLKASRRMIEFGVGSIVVV-ENGRPVGIVTESDIIRK 59



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     I  +K    + +A  I+ +K    + VVD G+KL GI+T+ DI 
Sbjct: 70  VKLEEIMTYPIITIKPTASIREAANIMLKKGIRRLPVVD-GEKLVGIVTDTDIL 122


>gi|302555281|ref|ZP_07307623.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
 gi|302472899|gb|EFL35992.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
          Length = 144

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNTLSVEDVM 289
           V+    L++A  ++  +  G   VV EGQ + G++T+ DI  R      D  T+SV+ V 
Sbjct: 17  VRPDASLVEAALLMRTQNIG-DVVVAEGQDVIGVLTDRDITVRAVADGADPMTVSVQTVC 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  +  +  +T A+ L+R+H +  L VV +    +GIV   D+   
Sbjct: 76  TPDPVTVTPEDRVTTAVTLMREHAVRRLPVV-ENGLPVGIVSLGDVAEA 123



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM      +  D  L  A  L+R  NI   +VV + Q  IG++   D+ 
Sbjct: 6   VKDVMTPGVVAVRPDASLVEAALLMRTQNIGD-VVVAEGQDVIGVLTDRDIT 56


>gi|218185325|gb|EEC67752.1| hypothetical protein OsI_35274 [Oryza sativa Indica Group]
          Length = 560

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +  G  + +A   ++ +R   V + D    L GI+T+ DI  R   + L         +M
Sbjct: 64  IPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIM 123

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P  ++ DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 124 TRTPVYVMSDTLAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 167



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
             L    S ++     + +V    P+  A   + E R   V +   G  L+GI T  D +
Sbjct: 214 RMLKPSLSTIISENTKVAIVSPWDPVCVAARKMRELRVNSVVIT-AGNSLQGIFTSKDVL 272

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   ++L+     VE VM  +P+    DT +  A+ ++       + VVD   + +  +
Sbjct: 273 MRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMHDGKFLHIPVVDGEGRVVACL 332

Query: 331 HFLDLLRFGI 340
             L +    I
Sbjct: 333 DVLQITHAAI 342



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E T +  A Q +    +  +++ D      GIV   D+ +
Sbjct: 62  VTIPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAK 105


>gi|110634385|ref|YP_674593.1| CBS domain-containing protein [Mesorhizobium sp. BNC1]
 gi|110285369|gb|ABG63428.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
          Length = 143

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
              S+ L+     + +A   + E   G + V  E  +L G++T+ DI  R   ++ +   
Sbjct: 7   MTRSVDLIDPNATIREAARKMREDNVGALPV-GENDRLIGMVTDRDITVRAVAEERSAGN 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            SV +VM +      ED     A  ++ +H +  L V++  ++ +GIV   DL+R
Sbjct: 66  TSVREVMSERVAYCYEDDDAERAAAVMARHQVRRLPVINRDKRLVGIVALADLVR 120



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++++M ++  +I  +  +  A + +R+ N+  L V  +  + IG+V   D+ 
Sbjct: 1   MQIQEIMTRSVDLIDPNATIREAARKMREDNVGALPV-GENDRLIGMVTDRDIT 53


>gi|225174297|ref|ZP_03728296.1| putative signal transduction protein with CBS domains [Dethiobacter
           alkaliphilus AHT 1]
 gi|225170082|gb|EEG78877.1| putative signal transduction protein with CBS domains [Dethiobacter
           alkaliphilus AHT 1]
          Length = 146

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMI 290
           V     + +A  ++ +   G + VVD   +LKGI+T+ DI  R+    +N    V   M 
Sbjct: 16  VSSQQTVQEAAQLMKQHNIGVIPVVD-NGQLKGIVTDRDITIRSTAGGVNANTPVSQCMS 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + K    +  +     L+ QH I  L VV +  + +G+V   DL
Sbjct: 75  TDVKFATSNMDVHEVANLMSQHQIRRLPVV-ENNQLVGMVAIGDL 118



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T ++  +M KN   +     +  A QL++QHNI V+ VVD+  +  GIV   D+ 
Sbjct: 2   TQTIGQIMTKNVVSVSSQQTVQEAAQLMKQHNIGVIPVVDN-GQLKGIVTDRDIT 55


>gi|116753622|ref|YP_842740.1| signal-transduction protein [Methanosaeta thermophila PT]
 gi|116665073|gb|ABK14100.1| putative signal-transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 185

 Score = 83.0 bits (204), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 6/126 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +   ++M        V     ++DA   +     G + VV +G K  GIITE D+ 
Sbjct: 1   METTMRVREIMSRPVLT--VDADTDVLDAANRMISANVGSLIVV-QGAKPIGIITERDLV 57

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +      +D     V DVM      I  D  L  A +L+ +  +  L V+ D  K +GI+
Sbjct: 58  KKVVARAEDPRKSRVGDVMNSPLIKIHPDASLRDAAELMLKSGVKRLPVISDDGKLVGII 117

Query: 331 HFLDLL 336
              DL+
Sbjct: 118 TDTDLV 123



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ V ++M +    +  DT +  A   +   N+  L+VV    K IGI+   DL++ 
Sbjct: 4   TMRVREIMSRPVLTVDADTDVLDAANRMISANVGSLIVV-QGAKPIGIITERDLVKK 59



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%), Gaps = 1/67 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     L DA  ++ +     + V+ +  KL GIIT+ D+       LN +  
Sbjct: 76  MNSPLIKIHPDASLRDAAELMLKSGVKRLPVISDDGKLVGIITDTDLVSGASLGLNDILA 135

Query: 286 EDV-MIK 291
           + + M +
Sbjct: 136 DLIEMHR 142


>gi|210620806|ref|ZP_03292257.1| hypothetical protein CLOHIR_00200 [Clostridium hiranonis DSM 13275]
 gi|210155156|gb|EEA86162.1| hypothetical protein CLOHIR_00200 [Clostridium hiranonis DSM 13275]
          Length = 281

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 6/174 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A +   +  R L +  + + G        A + I   K +V   GIG SG        
Sbjct: 95  ESARKLFNSNIRILENTFNIIDGN---DIEKATDMIINAK-KVFFIGIGYSGMTAEDSNY 150

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
             +  G     + ++        ++  DD+I+ +S SG +DE+   +  A+     +I++
Sbjct: 151 KFSRIGFNCMSLDSSHNMIMMASLMDEDDVIVAISHSGETDEIIKTVNIAKANGASVISV 210

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           T +  S +   +D+ L           G    +S + Q  I D +   +++ ++
Sbjct: 211 TEDKSSRLRDISDVNLGYFSGESILETGSI--SSKLAQFFIIDLVYTQVVKEKS 262


>gi|225849118|ref|YP_002729282.1| ggdef domain protein [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225644419|gb|ACN99469.1| ggdef domain protein [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 826

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+ +AI I+ E   G + VVD+     GI TE D+   F +  +   +E  M   
Sbjct: 146 VSRKTPVKEAIEIMFENNIGSILVVDDE-HPVGIFTERDVLNKFDELDSNQPIEMYMSSP 204

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + I  +T +  A++++    IS L V+    K +  +   D+++ 
Sbjct: 205 VETIDIETSVYDALKVMDSKKISRL-VLTQEGKFVSFITQRDIIKA 249



 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 2/111 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSV 285
            ++ P+V     L D I  + E   G V V+ + +   GI++E D+ R F + ++ + +V
Sbjct: 11  EENNPIVNSNDTLEDTIKKMREYNQGFV-VILKDKSAVGILSERDVIRLFKQKVDLSENV 69

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                K+   + +D  +  A+ LL ++NI  L+VVD+    +G V    LL
Sbjct: 70  MKFATKSLITVRKDRSVFFAVNLLVENNIRRLIVVDEKGDFVGTVTMKKLL 120



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-- 280
           +  +  S+  V+    +  A+ +L E     + VVDE     G +T   +     +D+  
Sbjct: 70  MKFATKSLITVRKDRSVFFAVNLLVENNIRRLIVVDEKGDFVGTVTMKKLLLKLEEDIYR 129

Query: 281 NTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L+++D+   KN   +   T +  A++++ ++NI  ++VVDD    +GI    D+L
Sbjct: 130 KNLTLKDLQGRKNIISVSRKTPVKEAIEIMFENNIGSILVVDDE-HPVGIFTERDVL 185


>gi|145590874|ref|YP_001152876.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282642|gb|ABP50224.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 141

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 4/106 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               +     +++EK+ G V +VD  E  ++ G+I+E D+ +    D++     + V  K
Sbjct: 15  PTNSIRHVARLMAEKKVGLVVLVDPKEHDRIVGVISERDVVKAVAFDIDLDSPCDVVATK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   I  D  +  A ++ R++NI   +VV    +  G++   D++R
Sbjct: 75  NVITIEYDQPVAKAAEIFRKYNIRH-VVVTKGGRLYGVLSIRDIIR 119


>gi|29349009|ref|NP_812512.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|253571154|ref|ZP_04848561.1| glucosamine-fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_6]
 gi|298386717|ref|ZP_06996272.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_14]
 gi|29340916|gb|AAO78706.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides
           thetaiotaomicron VPI-5482]
 gi|251839107|gb|EES67191.1| glucosamine-fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_6]
 gi|298260391|gb|EFI03260.1| glucosamine--fructose-6-phosphate aminotransferase [Bacteroides sp.
           1_1_14]
          Length = 349

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 60/133 (45%), Gaps = 6/133 (4%)

Query: 63  IKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
             G+   +++TG+G S  I +  AS L S   P++ ++A E  H  + +I+ + LII +S
Sbjct: 39  CSGKYRNILLTGMGSSYFIANATASLLNSYKIPAYALNAGELLHYQISLISPESLIICIS 98

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG S E+  ++      +I +++I +E  S +   +   L      E            
Sbjct: 99  QSGESYEVIKLIEKL-SSNITVLSICNEKDSSLVKFSRYSLLCKAGKEEKTSTKTFI--T 155

Query: 180 IMQLAIGDALAIA 192
             Q+A   A+ + 
Sbjct: 156 CYQVAYLLAMKLC 168


>gi|325290283|ref|YP_004266464.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
 gi|324965684|gb|ADY56463.1| CBS domain containing protein [Syntrophobotulus glycolicus DSM
           8271]
          Length = 139

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/104 (32%), Positives = 48/104 (46%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNTLSVEDVMIK 291
               L D   I+ E+  G V V  EG +L GIIT+ DI  R     KDL       VM  
Sbjct: 16  QNSSLSDIAKIMKEQDIGAVPVC-EGDRLLGIITDRDIIVRAVSEKKDLQKTLARQVMTL 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +P  I E   ++ A  L+ ++ +  L V+    K +GI+   DL
Sbjct: 75  DPICIEEKDSISQAADLMAEYQVKRLPVL-KSGKLVGIITLGDL 117



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +SV ++M        +++ L+   +++++ +I  + V  +  + +GI+   D++
Sbjct: 1   MSVSEIMSARIFSADQNSSLSDIAKIMKEQDIGAVPVC-EGDRLLGIITDRDII 53


>gi|309378461|emb|CBX22886.1| unnamed protein product [Neisseria lactamica Y92-1009]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|229056589|ref|ZP_04195996.1| Transcriptional regulator, RpiR [Bacillus cereus AH603]
 gi|228720802|gb|EEL72359.1| Transcriptional regulator, RpiR [Bacillus cereus AH603]
          Length = 287

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADRIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA++    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKKRGATVIAITKLDQSSPLYKAAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|170077940|ref|YP_001734578.1| polyA polymerase family protein [Synechococcus sp. PCC 7002]
 gi|169885609|gb|ACA99322.1| polyA polymerase family protein [Synechococcus sp. PCC 7002]
          Length = 900

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  +L       + VVD+ Q+L G+I+  D+    H   +   V
Sbjct: 320 MTAPVRTILPQTSIEEAQRVLFRYGHSGLVVVDDRQQLVGVISRRDLDLAIHHGFHHAPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +  + I  DT +     ++   ++  L V+ +  + +GIV   D+LR
Sbjct: 380 KGYMSREVRTIQPDTTMRDIETIMVTDDVGRLPVI-EGDQLLGIVTRTDVLR 430



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L+  D+M    + IL  T +  A ++L ++  S L+VVDD Q+ +G++   DL
Sbjct: 313 ALTARDLMTAPVRTILPQTSIEEAQRVLFRYGHSGLVVVDDRQQLVGVISRRDL 366



 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 32/72 (44%), Gaps = 1/72 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +   F  A    +    +  ++    + D  TI+     G + V+ EG +L GI+T  D
Sbjct: 369 AIHHGFHHAPVKGYMSREVRTIQPDTTMRDIETIMVTDDVGRLPVI-EGDQLLGIVTRTD 427

Query: 272 IFRNFHKDLNTL 283
           + R  H+D  +L
Sbjct: 428 VLRQHHQDEQSL 439


>gi|254673016|emb|CBA07563.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           alpha275]
 gi|261392527|emb|CAX50082.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase; IMPDH;
           IMPD) [Neisseria meningitidis 8013]
 gi|325128250|gb|EGC51135.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           N1568]
 gi|325130253|gb|EGC53022.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           OX99.30304]
 gi|325132227|gb|EGC54921.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M6190]
 gi|325136304|gb|EGC58912.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M0579]
 gi|325138210|gb|EGC60780.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           ES14902]
 gi|325202096|gb|ADY97550.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M01-240149]
 gi|325204194|gb|ADY99647.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M01-240355]
 gi|325206018|gb|ADZ01471.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M04-240196]
 gi|325208150|gb|ADZ03602.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           NZ-05/33]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|228985358|ref|ZP_04145517.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
 gi|228774311|gb|EEM22718.1| RpiR family transcriptional regulator [Bacillus thuringiensis
           serovar tochigiensis BGSC 4Y1]
          Length = 202

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 6/179 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++S V  A +   +    ++ L+ +L          A++ ++    R+   G G SG I
Sbjct: 10  VEDSMVTVAKKVFHS---YITGLQDTLHLLNDTALEQAIKVLQEAS-RIEFYGNGGSGII 65

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                     TG        +       G+++++ ++I +S SGS+  L   L   R   
Sbjct: 66  AMDAYHKFMRTGISCIAHTDSHFQIMGAGLLSKNSVVIGISHSGSNKGLLEALEIVRARG 125

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +I ITS  KS ++  ADI L             +  +S + QL++ D L + L   R
Sbjct: 126 AKIIVITSYQKSALSQLADITLYTSTRETEFRTEAS--SSRLAQLSLLDTLYVGLSLQR 182


>gi|224117650|ref|XP_002331597.1| predicted protein [Populus trichocarpa]
 gi|222873993|gb|EEF11124.1| predicted protein [Populus trichocarpa]
          Length = 205

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  ++    G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDTVYDAVKSMTHHNVGALVVVKHGEQESIAGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+    I  + V+DD    IG+V   D++R 
Sbjct: 133 DIMTEENKLITVAHDTKVLKAMQLMTDRRIRHIPVIDDKGM-IGMVSIGDVVRA 185



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ +++++R   + V+D
Sbjct: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVAHDTKVLKAMQLMTDRRIRHIPVID 169

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   + G+++ GD+ R  
Sbjct: 170 DKG-MIGMVSIGDVVRAV 186


>gi|194098575|ref|YP_002001637.1| inosine 5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           NCCP11945]
 gi|239998954|ref|ZP_04718878.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           35/02]
 gi|240125725|ref|ZP_04738611.1| inositol-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-92-679]
 gi|254493743|ref|ZP_05106914.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae 1291]
 gi|268594800|ref|ZP_06128967.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           35/02]
 gi|268684320|ref|ZP_06151182.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-92-679]
 gi|193933865|gb|ACF29689.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           NCCP11945]
 gi|226512783|gb|EEH62128.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae 1291]
 gi|268548189|gb|EEZ43607.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           35/02]
 gi|268624604|gb|EEZ57004.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae
           SK-92-679]
 gi|317164247|gb|ADV07788.1| inosine 5''''-monophosphate dehydrogenase [Neisseria gonorrhoeae
           TCDC-NG08107]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|15677074|ref|NP_274226.1| inositol-5-monophosphate dehydrogenase [Neisseria meningitidis
           MC58]
 gi|304387535|ref|ZP_07369724.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis ATCC
           13091]
 gi|7226438|gb|AAF41583.1| IMP dehydrogenase [Neisseria meningitidis MC58]
 gi|254669496|emb|CBA03409.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           alpha153]
 gi|304338422|gb|EFM04543.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis ATCC
           13091]
 gi|316985056|gb|EFV64009.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           H44/76]
 gi|325134546|gb|EGC57191.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M13399]
 gi|325140564|gb|EGC63085.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           CU385]
 gi|325144648|gb|EGC66947.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           M01-240013]
 gi|325200164|gb|ADY95619.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           H44/76]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|319410460|emb|CBY90820.1| inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase; IMPDH;
           IMPD) [Neisseria meningitidis WUE 2594]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|121634899|ref|YP_975144.1| inositol-5-monophosphate dehydrogenase [Neisseria meningitidis
           FAM18]
 gi|254804988|ref|YP_003083209.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           alpha14]
 gi|120866605|emb|CAM10356.1| putative inosine-5'-monophosphate dehydrogenase [Neisseria
           meningitidis FAM18]
 gi|254668530|emb|CBA05937.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           alpha14]
 gi|308389304|gb|ADO31624.1| putative inosine-5'-monophosphate dehydrogenase [Neisseria
           meningitidis alpha710]
 gi|325142397|gb|EGC64804.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           961-5945]
 gi|325198342|gb|ADY93798.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           G2136]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|108864045|gb|ABA91621.2| CBS domain-containing protein, putative, expressed [Oryza sativa
           Japonica Group]
 gi|215768686|dbj|BAH00915.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222615591|gb|EEE51723.1| hypothetical protein OsJ_33116 [Oryza sativa Japonica Group]
          Length = 560

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVM 289
           +  G  + +A   ++ +R   V + D    L GI+T+ DI  R   + L         +M
Sbjct: 64  IPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAKRVIAEGLRVEQTITSKIM 123

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P  ++ DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 124 TRTPVYVMSDTLAIEALQKMVQGKFRHLPVVENGE----VIAMLDIAK 167



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 4/130 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
             L    S ++     + +V    P+  A   + E R   V +   G  L+GI T  D +
Sbjct: 214 RMLKPSLSTIISENTKVAIVSPWDPVCVAARKMHELRVNSVVIT-AGNSLQGIFTSKDVL 272

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   ++L+     VE VM  +P+    DT +  A+ ++R      + VVD   + +  +
Sbjct: 273 MRVVTQNLSPELTHVEKVMTAHPECATLDTSILDALHIMRDGKFLHIPVVDGEGRVVACL 332

Query: 331 HFLDLLRFGI 340
             L +    I
Sbjct: 333 DVLQITHAAI 342



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 18/44 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E T +  A Q +    +  +++ D      GIV   D+ +
Sbjct: 62  VTIPEGTTVAEACQRMAARRVDAVLLTDANGLLSGIVTDKDIAK 105


>gi|297795865|ref|XP_002865817.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297311652|gb|EFH42076.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 548

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     L +A   ++ +R   + + D    L GI+T+ DI  +   K LN     V  VM
Sbjct: 74  VPDSTTLFEACRRMAARRVDALLLTDSNALLCGILTDRDIATKVIAKQLNLEETPVSKVM 133

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  +L DT+   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 134 TKNPVFVLSDTIAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 177



 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVM 289
           V +   ++     + E +     V+ E  KL GI+T  D + R   ++L   T +VE VM
Sbjct: 243 VGLDETVLGVTMKMVEYQSSAAMVMVEN-KLVGILTSKDILMRVISQNLPQETTTVEKVM 301

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            KNP+    D  +  A+ ++       L V+D     + ++  + +    +
Sbjct: 302 TKNPESATVDMAIVDALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 352


>gi|289596982|ref|YP_003483678.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
 gi|289534769|gb|ADD09116.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
          Length = 161

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 51/138 (36%), Gaps = 33/138 (23%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---------------- 277
                + DA  +  +       VVD   KL GI+T  DI +                   
Sbjct: 16  SPEMTIKDAYELFVKNHISGAPVVDPHGKLLGILTTKDILKIIKNRMEDIGIYVFPTPFD 75

Query: 278 -----------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                            + +    V ++M +    +  DT +  A++LL +  IS L VV
Sbjct: 76  FMEVLPIEIPEESKATFESIANTKVGEIMERRVHYVNPDTDIYEALELLVKKGISRLPVV 135

Query: 321 DDCQKAIGIVHFLDLLRF 338
           ++ +K +GI+   D+L+ 
Sbjct: 136 NENKKVVGIITRSDVLKA 153



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D+M K+   +  +  +  A +L  +++IS   VVD   K +GI+   D+L+ 
Sbjct: 4   IKDIMNKDVITLSPEMTIKDAYELFVKNHISGAPVVDPHGKLLGILTTKDILKI 57



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V     + +A+ +L +K    + VV+E +K+ GIIT  D+ +   K
Sbjct: 104 MERRVHYVNPDTDIYEALELLVKKGISRLPVVNENKKVVGIITRSDVLKALAK 156


>gi|84503059|ref|ZP_01001155.1| CBS domain protein [Oceanicola batsensis HTCC2597]
 gi|84388603|gb|EAQ01475.1| CBS domain protein [Oceanicola batsensis HTCC2597]
          Length = 144

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    P+     +LSE R G V V   G   +GI++E DI R   +          E++M
Sbjct: 18  VTPDTPVSQVAQVLSENRIGGVVVSTSGDTAEGILSERDIVRALSRRGPTCLEDRAEEMM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            ++P            ++ +       + VV +  K IGIV   D+++  +
Sbjct: 78  TRDPVCCQRRDTADEVLRRMTDGRFRHMPVV-EDGKLIGIVTIGDVVKARL 127



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTL 283
                    +      + +  +++ RF  + VV E  KL GI+T GD+ +   ++     
Sbjct: 76  MMTRDPVCCQRRDTADEVLRRMTDGRFRHMPVV-EDGKLIGIVTIGDVVKARLNELSMER 134

Query: 284 SVEDVMIKN 292
              + MI  
Sbjct: 135 DALEGMIAG 143



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  DT ++   Q+L ++ I  ++V      A GI+   D++R 
Sbjct: 16  VTVTPDTPVSQVAQVLSENRIGGVVVSTSGDTAEGILSERDIVRA 60


>gi|138895529|ref|YP_001125982.1| RpiR family transcriptional regulator [Geobacillus
           thermodenitrificans NG80-2]
 gi|134267042|gb|ABO67237.1| Transcriptional regulator RpiR family, putative [Geobacillus
           thermodenitrificans NG80-2]
          Length = 285

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 70/180 (38%), Gaps = 7/180 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+  +  ++     K  + +  ++L      +   A E +   + RVV  G+G S    
Sbjct: 93  PNAPYELFMKVTYVNKAAIEATTTTLDKR---ELEKAAEAMMKAE-RVVFYGVGGSAAAA 148

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
              +      G  +            +  +   D+ + +S SG + ++  I  +A++   
Sbjct: 149 VDASYKFTKLGYMAATSPDFHTMLPLVAHLKEGDVFVAISTSGRTKDVLEIARFAKKQQA 208

Query: 140 PLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT  +  S +   ADI L LP   +    G     S ++QL + DAL + +     
Sbjct: 209 TVIAITKLDPASPLYKEADIRLALPDVEQDHRIG--SMASRMVQLNVIDALYLIMFHRVG 266


>gi|56421656|ref|YP_148974.1| nucleoside-diphosphate-sugar pyrophosphorylase [Geobacillus
           kaustophilus HTA426]
 gi|56381498|dbj|BAD77406.1| nucleoside-diphosphate-sugar pyrophosphorylase [Geobacillus
           kaustophilus HTA426]
          Length = 349

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 21/100 (21%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LV     +I+ +  + +       VVD+  +L G +T+GDI R   + ++    V  VM 
Sbjct: 8   LVSPSTSIIETMKNIDQTAAQIALVVDDDFRLLGTVTDGDIRRGILRGISLDDQVSKVMN 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           KNP  + +        +L ++  +  L +++   + + ++
Sbjct: 68  KNPITMKKGASKQEIKRLFQEKKLRQLPILNQNNQVVDVI 107


>gi|51893030|ref|YP_075721.1| acetoin dehydrogenase [Symbiobacterium thermophilum IAM 14863]
 gi|51856719|dbj|BAD40877.1| acetoin dehydrogenase [Symbiobacterium thermophilum IAM 14863]
          Length = 205

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
             + +  V     L  A  I+  K + C+ V    +++ GII   DI+    +D      
Sbjct: 7   MTEDVTTVSPDDTLQQAYEIIQTKNYDCLPVT-ANRRVVGIIQLTDIYEACMRDGRQAAL 65

Query: 284 --SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V++ M+ +P  +  D L+  A +L+ + +I +L VV   ++ +G++H  D+ R 
Sbjct: 66  PRPVKEFMVPDPVTVRPDDLVETAAKLMFKRDIPLLPVV-HGERLVGVIHEHDIFRA 121



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V +VM ++   +  D  L  A ++++  N   L V    ++ +GI+   D+   
Sbjct: 3   VRNVMTEDVTTVSPDDTLQQAYEIIQTKNYDCLPVT-ANRRVVGIIQLTDIYEA 55


>gi|205375600|ref|ZP_03228387.1| hypothetical protein Bcoam_21763 [Bacillus coahuilensis m4-4]
          Length = 137

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           + +A  ++ E   G V +VD G KL G+IT+ DI       K  N+  ++D+M  N   +
Sbjct: 20  VYEAAVLMKEHNIGSVPIVD-GSKLVGMITDRDIVIKGIAEKKPNSSRIQDLMSTNIITV 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D     A++++++H I  L VV + +  IG+V   DL
Sbjct: 79  TADCTTDKALEIMKEHQIRRLPVV-NGEHLIGMVSLGDL 116



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +ED+M +  +       +  A  L+++HNI  + +VD   K +G++   D++  GI
Sbjct: 1   MKIEDLMTREVEACTLLDNVYEAAVLMKEHNIGSVPIVDGS-KLVGMITDRDIVIKGI 57


>gi|20095099|ref|NP_614946.1| sugar phosphate isomerase [Methanopyrus kandleri AV19]
 gi|19888387|gb|AAM02876.1| Predicted sugar phosphate isomerase [Methanopyrus kandleri AV19]
          Length = 180

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/185 (24%), Positives = 80/185 (43%), Gaps = 11/185 (5%)

Query: 25  QCALRSIIAEKRGLSSLESSL-QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
               + +  E   +    ++L + ++       VEKI+  +G + I G+G++G IG   A
Sbjct: 2   DRIRKIMRREAEVIEYACNNLPEEDVKKALDLVVEKIRNDRG-IFIVGMGRTGLIGECFA 60

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G   + V      H     I  DDL+I LS SG++  +      A+     ++A
Sbjct: 61  VRLVQMGARCYVVG-----HSTERAIKPDDLLIALSVSGNTAFVNYAADVAKDEGADVLA 115

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T    S +A  AD+V+ LP+  E     +  T S ++ L+  D     L +     E+D
Sbjct: 116 VTMNADSKIAEKADVVVVLPEPEEI----ILRTFSEMLMLSFLDGFTAQLAKELGVDESD 171

Query: 204 FYVLH 208
            +  H
Sbjct: 172 MWERH 176


>gi|225180861|ref|ZP_03734309.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
 gi|225168342|gb|EEG77145.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
          Length = 644

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 65/198 (32%), Gaps = 13/198 (6%)

Query: 144 ITSENKSVVACHAD--IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           ++ E  S     A+    + +P E            ++     + D +       RN   
Sbjct: 97  LSEEPYSACVRAAEDLTCIVIPNEIFENILSHNADFTSSFSRILADRM-------RNVYF 149

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
                  PG       +                    +      ++      V VVD+  
Sbjct: 150 ALITENEPGHTPIEQPMRKRVANLMSAPPVTCAPEDEIQAIAEKMTSGGVSSVVVVDKDG 209

Query: 262 KLKGIITEGDIF-RNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           K  GIITE D+  +   +   L  ++   +M      +        A+ ++ ++ +  L+
Sbjct: 210 KPLGIITEKDLVGKILARGDFLKRITASTIMSTKLLTVAPGAFYYEALLIMVRNKVKHLV 269

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V+D+  K +GIV   DL+
Sbjct: 270 VIDN-NKLVGIVTIRDLM 286


>gi|84686868|ref|ZP_01014752.1| inosine-5'-monophosphate dehydrogenase [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84665065|gb|EAQ11545.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           HTCC2654]
          Length = 484

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAICMAQAGGIGVIHKNLTVEEQAREVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +     F    VVDE +++ GI+T  D+    H D     V  +M 
Sbjct: 99  T---PDQTLADAKALTERYGFTGFPVVDENRRVVGIVTNRDMRFAQHDD---TPVRVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   IL++      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 GDDLAILQEPADRDEAISLMKSRRIEKLLVTDKTGKLTGLLTLRD 197



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++  +   VVD+ ++ +GIV   D+
Sbjct: 94  NPVTLTPDQTLADAKALTERYGFTGFPVVDENRRVVGIVTNRDM 137


>gi|291085044|ref|ZP_06351857.2| inosine-5'-monophosphate dehydrogenase [Citrobacter youngae ATCC
           29220]
 gi|291071744|gb|EFE09853.1| inosine-5'-monophosphate dehydrogenase [Citrobacter youngae ATCC
           29220]
          Length = 525

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 46/220 (20%), Positives = 76/220 (34%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 34  EILPMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLSTQLTKTIRLNIPMLSAAMD 87

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    S V+        V     L 
Sbjct: 88  TVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDPQTVLPTTTLR 144

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILE 298
           +   +     F    VV E  +L GIIT  D+   F  DLN   V   M        + E
Sbjct: 145 EVKELTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPKERLVTVRE 201

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V    + +  +   +VVDD    +G++   D  + 
Sbjct: 202 GEARDVVFAKMHEKRVEKALVVDDSFHLLGMITVKDFQKA 241


>gi|229171504|ref|ZP_04299085.1| CBS domain protein [Bacillus cereus MM3]
 gi|228611942|gb|EEK69183.1| CBS domain protein [Bacillus cereus MM3]
          Length = 147

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K     +       S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEETKMTRVRDFMSTHVVHCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTTNIVSVSPDEPIEKATELMAQYQIRRLPVV-EGGQLVGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDFMSTHVVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 66


>gi|225174496|ref|ZP_03728495.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
 gi|225170281|gb|EEG79076.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Dethiobacter alkaliphilus AHT 1]
          Length = 645

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 73/180 (40%), Gaps = 12/180 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L LP +         P  S+     +   + +      + + + + +  P      +   
Sbjct: 118 LKLPFDIFENILSRHPEFSSQFSKILTARMRLIYHIQMSGASSGYVIDQP------MHKR 171

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NF 276
            +D+M +     L   G  + D    ++ +    + V D+ +K  GIITE D+ +     
Sbjct: 172 VADLMSAPVITCL--SGNEITDLARTMTSRNVSSIIVTDQDEKPIGIITEKDLVKKVVAA 229

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + +L  ED+M +N   +  D     A+  + +H+I  L VV    KAIG++   D++
Sbjct: 230 GCFVKSLKAEDIMSENLLTVKSDAFYYEALLTMVEHSIKHL-VVTAKDKAIGMITIRDMI 288



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V D+M       L    +T   + +   N+S ++V D  +K IGI+   DL++ 
Sbjct: 169 HKRVADLMSAPVITCLSGNEITDLARTMTSRNVSSIIVTDQDEKPIGIITEKDLVKK 225


>gi|42565877|ref|NP_190863.3| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|7529719|emb|CAB86899.1| putative protein [Arabidopsis thaliana]
 gi|332645495|gb|AEE79016.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
 gi|332645496|gb|AEE79017.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 556

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           +  G  + DA   ++ +R     + D    L GI+T+ D+  R   + L  +   V  VM
Sbjct: 75  IPEGTTVFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVM 134

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 135 TRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGE----VIALLDITK 178



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + LV    P+  A   + + R   V ++  G K+ GI+T  D + R   ++
Sbjct: 232 STIITDNSKVALVAPSDPVSVAAKRMRDLRVNSV-IISTGNKISGILTSKDILMRVVAQN 290

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L+     VE VM  NP+    +T +  A+  +       L ++D   
Sbjct: 291 LSPELTLVEKVMTPNPECASLETTILDALHTMHDGKFLHLPIIDKDG 337


>gi|307354272|ref|YP_003895323.1| CBS domain-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307157505|gb|ADN36885.1| CBS domain containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 381

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     +   +  +   +     V+ E   L G++T  DI      D   + V
Sbjct: 264 MSSPVTYISPASSVDAVVQAMYNTKHLGFPVI-ENGALIGVVTLHDINTISAIDREAMIV 322

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM K+P  +  +  LT A++L+   NI  + VV    +  GIV   D+LRF
Sbjct: 323 RDVMTKDPVTLPPEAPLTDALKLMSTMNIGRVPVV-RDGQVEGIVTRTDILRF 374



 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               PL DA+ ++S    G V VV    +++GI+T  DI R   
Sbjct: 334 PPEAPLTDALKLMSTMNIGRVPVV-RDGQVEGIVTRTDILRFLE 376



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 21/56 (37%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  ++V + M      I   + +   +Q +         V+ +    IG+V   D+
Sbjct: 255 LEGVTVANAMSSPVTYISPASSVDAVVQAMYNTKHLGFPVI-ENGALIGVVTLHDI 309


>gi|218700893|ref|YP_002408522.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI39]
 gi|263505172|sp|B7NPW3|MURR_ECO7I RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|218370879|emb|CAR18696.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI39]
          Length = 285

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--QALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVTCEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEVARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|254474772|ref|ZP_05088158.1| inosine-5'-monophosphate dehydrogenase [Ruegeria sp. R11]
 gi|214029015|gb|EEB69850.1| inosine-5'-monophosphate dehydrogenase [Ruegeria sp. R11]
          Length = 482

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    L         V         
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGG-----MGVIHKNLDLEEQARQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +    R     VVD   ++ GI+T  D+        +   V  +
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDGEGRVVGIVTNRDMRFATD---DNTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  V+ E   L  A  +++   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLAVMQEPAELEEAKSMMKARRIEKLLVTDKSGKLTGLLTLKD 197



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD   + +GIV   D+
Sbjct: 94  NPITLTADQTLADAKALQERYRVTGFPVVDGEGRVVGIVTNRDM 137


>gi|229916944|ref|YP_002885590.1| RpiR family transcriptional regulator [Exiguobacterium sp. AT1b]
 gi|229468373|gb|ACQ70145.1| transcriptional regulator, RpiR family [Exiguobacterium sp. AT1b]
          Length = 282

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            ++ ++ A +      + + S    L+G        AVE     + R+   G G S  + 
Sbjct: 91  TDTALEIAEKIFSTNGKTIESTRQILEG---VSLEKAVELFLGAR-RIEFFGSGGSAVVA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    +G     +  +         +T  D+ +V+S SG+S E   I    +   +
Sbjct: 147 LDAYHKFVRSGLQVSAMLESHMQLMSASQLTTADVAVVISHSGASKETLDIAKLLKEKGV 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           P+IAIT+  KS ++  AD+ L      +          S I +L++ DAL  A++  R 
Sbjct: 207 PMIAITNYAKSPLSKIADVSLYT--VSQETAFRSEALASRIAELSLIDALFTAVMMRRG 263


>gi|161870048|ref|YP_001599217.1| inosine 5'-monophosphate dehydrogenase [Neisseria meningitidis
           053442]
 gi|161595601|gb|ABX73261.1| inosine-5'-monophosphate dehydrogenase [Neisseria meningitidis
           053442]
          Length = 498

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 51  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 105

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 106 DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 162

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 163 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 214


>gi|115477978|ref|NP_001062584.1| Os09g0115500 [Oryza sativa Japonica Group]
 gi|46389988|dbj|BAD16230.1| CBS domain containing protein-like [Oryza sativa Japonica Group]
 gi|113630817|dbj|BAF24498.1| Os09g0115500 [Oryza sativa Japonica Group]
 gi|215686955|dbj|BAG89764.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215692644|dbj|BAG88064.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218201664|gb|EEC84091.1| hypothetical protein OsI_30399 [Oryza sativa Indica Group]
 gi|222641067|gb|EEE69199.1| hypothetical protein OsJ_28393 [Oryza sativa Japonica Group]
          Length = 227

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 59/157 (37%), Gaps = 31/157 (19%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M    ++ +V     + +A+  L + +     VVD+  KL G++++ D+  
Sbjct: 61  NGVYTVGDFMTKRPNLHVVTPATSVDEALETLVQHKISGFPVVDDTGKLVGVVSDYDLLA 120

Query: 274 ---------------------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLT 303
                                      R   + L+  +   + DVM  +P  + E T L 
Sbjct: 121 LDSISGSGLTGTNTSMFPEVDSTWKTFREIQRLLSKTNGKVIADVMTYSPLAVRESTNLD 180

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            A +LL +     L VVD   K +G++    ++R  +
Sbjct: 181 AATRLLLETKYRRLPVVDSTGKLVGMITRGTVVRAAL 217


>gi|304315128|ref|YP_003850275.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588587|gb|ADL58962.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 281

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 28/101 (27%), Positives = 53/101 (52%), Gaps = 7/101 (6%)

Query: 242 AITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           A+ ++ ++    + VV +G ++L GIIT  D+     ++ +   +  +M +NP  +  D 
Sbjct: 23  ALELMRKENVSGLPVVKKGTEELVGIITRSDLV----ENPDEEQIALIMTRNPVTVAPDD 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + VA + + + NI  + VVD   + +GIV   DL+  G I
Sbjct: 79  DVRVAAERMLERNIRRVPVVDQD-RLVGIVTSYDLV-AGAI 117



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 3/54 (5%)

Query: 285 VEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           V+++M +    +       T A++L+R+ N+S L VV    ++ +GI+   DL+
Sbjct: 3   VKEIMSEKIHYVTVPGNRAT-ALELMRKENVSGLPVVKKGTEELVGIITRSDLV 55



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 24/162 (14%), Positives = 48/162 (29%), Gaps = 33/162 (20%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G +  + +      +   +IP      PL  A  I+       +  ++   +L G++TE
Sbjct: 114 AGAIAEMEIDEPVENYMTRNIPTTWDRTPLSVAFEIMRYFGLKVLLALNNSGELSGVLTE 173

Query: 270 GDIFRNFH------------------------------KDLNTLS---VEDVMIKNPKVI 296
            D                                    K+        V DV   +    
Sbjct: 174 TDFINESEVVSESTVHNTSVGTEGDRWSWDSKNVLYVIKNQLKFPDKEVRDVATTDIVTA 233

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              T +T   + +++ NI  + ++D      G+    DL+  
Sbjct: 234 TTSTTVTSCARKMKRRNIEQIPIIDYEGNLTGLARANDLINA 275


>gi|81242084|gb|ABB62794.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 306

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQR 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQATK--SASISACHAQGMLTDLLFIALIQQ 286


>gi|229180930|ref|ZP_04308265.1| hypothetical protein bcere0005_42740 [Bacillus cereus 172560W]
 gi|228602487|gb|EEK59973.1| hypothetical protein bcere0005_42740 [Bacillus cereus 172560W]
          Length = 437

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPSDTVQQWHAYNEETMHGRYPIVDESNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|218233460|ref|YP_002369406.1| thioesterase family protein [Bacillus cereus B4264]
 gi|228960878|ref|ZP_04122511.1| hypothetical protein bthur0005_43330 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|229048317|ref|ZP_04193885.1| hypothetical protein bcere0027_42850 [Bacillus cereus AH676]
 gi|229112076|ref|ZP_04241619.1| hypothetical protein bcere0018_43190 [Bacillus cereus Rock1-15]
 gi|229129894|ref|ZP_04258860.1| hypothetical protein bcere0015_43340 [Bacillus cereus BDRD-Cer4]
 gi|229147170|ref|ZP_04275528.1| hypothetical protein bcere0012_43060 [Bacillus cereus BDRD-ST24]
 gi|229152805|ref|ZP_04280988.1| hypothetical protein bcere0011_43370 [Bacillus cereus m1550]
 gi|296505081|ref|YP_003666781.1| CBS domain-containing cytosolic protein [Bacillus thuringiensis
           BMB171]
 gi|218161417|gb|ACK61409.1| thioesterase family protein [Bacillus cereus B4264]
 gi|228630625|gb|EEK87271.1| hypothetical protein bcere0011_43370 [Bacillus cereus m1550]
 gi|228636280|gb|EEK92752.1| hypothetical protein bcere0012_43060 [Bacillus cereus BDRD-ST24]
 gi|228653585|gb|EEL09457.1| hypothetical protein bcere0015_43340 [Bacillus cereus BDRD-Cer4]
 gi|228671399|gb|EEL26700.1| hypothetical protein bcere0018_43190 [Bacillus cereus Rock1-15]
 gi|228723042|gb|EEL74419.1| hypothetical protein bcere0027_42850 [Bacillus cereus AH676]
 gi|228798774|gb|EEM45754.1| hypothetical protein bthur0005_43330 [Bacillus thuringiensis
           serovar pakistani str. T13001]
 gi|296326133|gb|ADH09061.1| CBS domain-containing cytosolic protein [Bacillus thuringiensis
           BMB171]
          Length = 437

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 50/128 (39%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +K    +        E   G   +VDE  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPIEETLYLKPSDTVQQWHAYNEETMHGRYPIVDESNKVLGIVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D             ++ VM K+P  +     +  A +++    I +L VV++  K  GI+
Sbjct: 242 D----MIGVAKETPIDKVMTKHPITVNGKMSVAAAARMMVWEGIELLPVVEEGNKLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLQA 305


>gi|157144559|ref|YP_001451878.1| inosine 5'-monophosphate dehydrogenase [Citrobacter koseri ATCC
           BAA-895]
 gi|157081764|gb|ABV11442.1| hypothetical protein CKO_00279 [Citrobacter koseri ATCC BAA-895]
          Length = 488

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DL +  V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDL-SQPVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V    + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVFAKMHEKRVEKALVVDDSFHLIGMITVKDFQKA 204


>gi|125974837|ref|YP_001038747.1| signal-transduction protein [Clostridium thermocellum ATCC 27405]
 gi|256004903|ref|ZP_05429876.1| putative signal transduction protein with CBS domains [Clostridium
           thermocellum DSM 2360]
 gi|281418708|ref|ZP_06249727.1| putative signal transduction protein with CBS domains [Clostridium
           thermocellum JW20]
 gi|125715062|gb|ABN53554.1| putative signal-transduction protein with CBS domains [Clostridium
           thermocellum ATCC 27405]
 gi|255991083|gb|EEU01192.1| putative signal transduction protein with CBS domains [Clostridium
           thermocellum DSM 2360]
 gi|281407792|gb|EFB38051.1| putative signal transduction protein with CBS domains [Clostridium
           thermocellum JW20]
 gi|316941959|gb|ADU75993.1| putative signal transduction protein with CBS domains [Clostridium
           thermocellum DSM 1313]
          Length = 142

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNTLSVEDVM 289
           V     +++A  ++ +   G + V D+G  + GI+T+ DI  RN    K      V+DVM
Sbjct: 14  VSPQSSVVEAAQLMQKHNVGSIPVYDQG--VVGIVTDRDIVVRNVAHGKTPKDTKVQDVM 71

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 +  D  +    +L+    I  + VV +  + +G++   D+
Sbjct: 72  TSQVTTVTPDMDVEEVTKLMANQQIRRVPVV-ENNQLVGMLSLGDI 116



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D M K    +   + +  A QL+++HN+  + V D     +GIV   D++
Sbjct: 1   MKVRDKMTKTVAYVSPQSSVVEAAQLMQKHNVGSIPVYDQG--VVGIVTDRDIV 52


>gi|74312963|ref|YP_311382.1| hypothetical protein SSON_2516 [Shigella sonnei Ss046]
 gi|123616580|sp|Q3YZB5|MURR_SHISS RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|73856440|gb|AAZ89147.1| conserved hypothetical protein [Shigella sonnei Ss046]
 gi|323169132|gb|EFZ54809.1| helix-turn-helix domain, rpiR family protein [Shigella sonnei 53G]
          Length = 285

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G    +             + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVAYEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|296314428|ref|ZP_06864369.1| inosine-5'-monophosphate dehydrogenase [Neisseria polysaccharea
           ATCC 43768]
 gi|296838864|gb|EFH22802.1| inosine-5'-monophosphate dehydrogenase [Neisseria polysaccharea
           ATCC 43768]
          Length = 487

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVNLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|296133844|ref|YP_003641091.1| CBS domain containing membrane protein [Thermincola sp. JR]
 gi|296032422|gb|ADG83190.1| CBS domain containing membrane protein [Thermincola potens JR]
          Length = 217

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               + L+     + +A+ ++ +     + VVD  Q L G+ +E D+ + F ++ +    
Sbjct: 7   MAQPVVLITEKATVGEALELIRQHDVRHLPVVDRKQHLVGVTSESDLLKIFPRNKHDERK 66

Query: 283 ---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      +  VM+ NP  I     +  A  L++ H I  L V++   K IG++   
Sbjct: 67  TFETNLLLRTPITQVMVPNPYHINPHITIEEAALLMKNHKIGCLPVIEHS-KVIGLISRT 125

Query: 334 DLLRF 338
           D++  
Sbjct: 126 DVIEA 130



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M +   +I E   +  A++L+RQH++  L VVD  Q  +G+    DLL+ 
Sbjct: 3   VKDLMAQPVVLITEKATVGEALELIRQHDVRHLPVVDRKQHLVGVTSESDLLKI 56


>gi|296108758|ref|YP_003615707.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295433572|gb|ADG12743.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 131

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +   L + + I+ +     V VV +G++  GI+T+ DI +N+H      + E+VM   
Sbjct: 18  VPLDTKLEEIVKIMDKYNISSV-VVSDGEQFWGIVTDTDILKNYHN--LDKTAEEVMTSK 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
             ++  +  L  A+ L+ +H I  L V      + IG++   D+++ 
Sbjct: 75  VILVTPEAPLEKAIDLMVEHKIHHLYVKSSCEDRIIGVISSRDIIKL 121



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V DVM K    +  DT L   ++++ ++NIS  +VV D ++  GIV   D+L+
Sbjct: 7   VRDVMTKGVVEVPLDTKLEEIVKIMDKYNISS-VVVSDGEQFWGIVTDTDILK 58


>gi|256374424|ref|YP_003098084.1| RpiR family transcriptional regulator [Actinosynnema mirum DSM
           43827]
 gi|255918727|gb|ACU34238.1| transcriptional regulator, RpiR family [Actinosynnema mirum DSM
           43827]
          Length = 304

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 6/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +   Q   +   A+ R +      L  +       AV    A  GRV + G G S  +  
Sbjct: 100 DDLRQVVGKVAFADARAVEETAEQLNVDTLQAVVDAV----ARAGRVDVYGFGASAFVAF 155

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G   F  +    +     ++T  D+ + +S +GS+ E    L  AR     
Sbjct: 156 DLQQKLHRIGRTCFAWNDTHIALTSAAVLTGADVAVGISHTGSTTETVEALRVARERGAT 215

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +A+T+  +S ++  AD VLT      +   G     S I QL + D L I + +  
Sbjct: 216 TVALTNFPRSPISEVADHVLTTAARETTFRSGA--MASRIAQLTVVDCLFIGVAQHH 270


>gi|218547912|ref|YP_002381703.1| DNA-binding transcriptional regulator [Escherichia fergusonii ATCC
           35469]
 gi|218355453|emb|CAQ88062.1| fused putative DNA-binding transcriptional regulator; putative
           isomerase [Escherichia fergusonii ATCC 35469]
 gi|323978409|gb|EGB73494.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TW10509]
          Length = 282

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHEGVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSAAISACHAQGMLTDLLFIALIQQ 262


>gi|194098734|ref|YP_002001796.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae NCCP11945]
 gi|239999033|ref|ZP_04718957.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae 35/02]
 gi|240014059|ref|ZP_04720972.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae DGI18]
 gi|240016494|ref|ZP_04723034.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA6140]
 gi|240080619|ref|ZP_04725162.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae FA19]
 gi|240113016|ref|ZP_04727506.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae MS11]
 gi|240115773|ref|ZP_04729835.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID18]
 gi|240118068|ref|ZP_04732130.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID1]
 gi|240121623|ref|ZP_04734585.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID24-1]
 gi|240123621|ref|ZP_04736577.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae PID332]
 gi|240125805|ref|ZP_04738691.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae SK-92-679]
 gi|240128325|ref|ZP_04740986.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae SK-93-1035]
 gi|291043710|ref|ZP_06569426.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|293399002|ref|ZP_06643167.1| RpiR-family transcriptional regulator [Neisseria gonorrhoeae F62]
 gi|193934024|gb|ACF29848.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae NCCP11945]
 gi|291012173|gb|EFE04162.1| RpiR family transcriptional regulator [Neisseria gonorrhoeae DGI2]
 gi|291610416|gb|EFF39526.1| RpiR-family transcriptional regulator [Neisseria gonorrhoeae F62]
 gi|317164326|gb|ADV07867.1| putative RpiR-family transcriptional regulator [Neisseria
           gonorrhoeae TCDC-NG08107]
          Length = 294

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV   G+G SG +           G  +              +++  D+++ +S +GSS 
Sbjct: 141 RVEFYGVGNSGIVAQDAQHKFFRFGMSTVAYVDTHTQLMAASVLSDQDVLVAISNTGSSI 200

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   +  A+     +IA+T    S +A  AD VL      +       P  S ++QLA+
Sbjct: 201 ELLDAVSIAKENGASVIALTRN-DSPLAQLADCVL--SVATQENAELYTPMVSRLLQLAV 257

Query: 186 GDALAIALLESRN 198
            D LAI L     
Sbjct: 258 IDILAIGLALRLG 270


>gi|226355880|ref|YP_002785620.1| hypothetical protein Deide_09850 [Deinococcus deserti VCD115]
 gi|226317870|gb|ACO45866.1| conserved hypothetical protein [Deinococcus deserti VCD115]
          Length = 207

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 15/123 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           V    P++DA+ IL E  F  + VV EG +L GI T  D+                   L
Sbjct: 14  VTPDTPVMDALKILKEGNFRRLPVV-EGSQLVGITTRKDLKDAMPSKATTLSVWELNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF-- 338
           + L+V ++M +      E   +  A   +++H++  L V+ D  +  GI+  +D+LR   
Sbjct: 73  SKLTVSEMMARPVITAAEGEYMEDAALRMQEHHVGGLPVLSDSGRLSGIITTMDVLRAFT 132

Query: 339 GII 341
           GI+
Sbjct: 133 GIL 135



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M  +P  +  DT +  A+++L++ N   L VV+  Q  +GI    DL
Sbjct: 3   VRDWMTADPVSVTPDTPVMDALKILKEGNFRRLPVVEGSQ-LVGITTRKDL 52


>gi|156932951|ref|YP_001436867.1| inosine 5'-monophosphate dehydrogenase [Cronobacter sakazakii ATCC
           BAA-894]
 gi|156531205|gb|ABU76031.1| hypothetical protein ESA_00754 [Cronobacter sakazakii ATCC BAA-894]
          Length = 488

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVD+     G++   D  + 
Sbjct: 155 PKARLVTVREGESRDVVLAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 204


>gi|24214226|ref|NP_711707.1| putative signal transduction protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45658085|ref|YP_002171.1| hypothetical protein LIC12236 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|24195133|gb|AAN48725.1| predicted signal transduction protein containing CBS domains
           [Leptospira interrogans serovar Lai str. 56601]
 gi|45601326|gb|AAS70808.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 146

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD---IFRNFHKDLNTLSVEDVM 289
           V+    ++D +  +++   G V ++ E  KLKGI TE D   +      DL   SV +VM
Sbjct: 17  VEPETLVMDVVKFMTKYDIGSVIILGE-GKLKGIFTERDVLHLSAELGLDLFKKSVSEVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +   +  +  +   + ++ +  I  + ++++    IGI+   D ++  I
Sbjct: 76  TTSITTMTPEDDVDELLSIMLKKRIRHMPILEND-TLIGIISIGDAVKAKI 125


>gi|154504594|ref|ZP_02041332.1| hypothetical protein RUMGNA_02099 [Ruminococcus gnavus ATCC 29149]
 gi|153795076|gb|EDN77496.1| hypothetical protein RUMGNA_02099 [Ruminococcus gnavus ATCC 29149]
          Length = 484

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMTIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFSLSPDHTLADANDLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLITAPEGITLEDAKKILAKARKEKLPIVDKDGNLKGLITIKDI 199


>gi|163815554|ref|ZP_02206927.1| hypothetical protein COPEUT_01719 [Coprococcus eutactus ATCC 27759]
 gi|158449191|gb|EDP26186.1| hypothetical protein COPEUT_01719 [Coprococcus eutactus ATCC 27759]
          Length = 513

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 71  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----VIHKNMTIEKQAEEVDKVKRSENGVIS 125

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++S+ R   V +  E  KL GIIT  D+   F KD  T  +++ 
Sbjct: 126 DPFYLSPEHTLADADELMSKFRISGVPIT-ENGKLVGIITNRDLK--FEKD-YTKKIKES 181

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 182 MTSEGLVTAKEGITLDEAREILGKARKEKLPIVDDDFHLKGLITIKDI 229


>gi|125528914|gb|EAY77028.1| hypothetical protein OsI_04983 [Oryza sativa Indica Group]
 gi|125573153|gb|EAZ14668.1| hypothetical protein OsJ_04591 [Oryza sativa Japonica Group]
          Length = 497

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     + +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM
Sbjct: 18  IPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 78  TRNPLFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 121



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 4/123 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     +  V     ++ A   + E +    AVV    K  GI+T  D + R   ++
Sbjct: 175 STIISENSKVVTVAPTDTVLTASKKMLEVKV-SSAVVAIENKPGGILTSRDILMRVIAQN 233

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   + +VE VM + P+    DT +  A+  +       L V+D     + +V  L +  
Sbjct: 234 LPPESTTVEKVMTQTPECATVDTPILDALHTMHDGKFLHLPVLDKDGNVVTVVDVLHITH 293

Query: 338 FGI 340
             I
Sbjct: 294 AAI 296


>gi|152976990|ref|YP_001376507.1| DRTGG domain-containing protein [Bacillus cereus subsp. cytotoxis
           NVH 391-98]
 gi|152025742|gb|ABS23512.1| DRTGG domain protein [Bacillus cytotoxicus NVH 391-98]
          Length = 437

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 73/194 (37%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+ ++  +   A +++T   + E     LA      +  +  D   +A L +R   +   
Sbjct: 125 TNAHQLALERGAAVLITGGFDTEDYVKKLADELRLPIISSSYDTFTVATLINRAIYD--- 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   +    V   D++   +    +K    +        E   G   ++D+ +K+ 
Sbjct: 182 ------QLIKKEIVLVEDILTPIEETLYLKPDDKVERWHAYNKETMHGRYPIIDDNKKVL 235

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T  D             +E VM K P  +     +  A +++    I +L VVD+  
Sbjct: 236 GIVTSKD----MIGVAKETPIEKVMTKQPITVNGKMSVAAAARMMVWEGIEMLPVVDEGS 291

Query: 325 KAIGIVHFLDLLRF 338
           K  GI+   D+L+ 
Sbjct: 292 KLQGIISRQDVLQA 305


>gi|89070970|ref|ZP_01158196.1| inosine-5'-monophosphate dehydrogenase [Oceanicola granulosus
           HTCC2516]
 gi|89043477|gb|EAR49691.1| inosine-5'-monophosphate dehydrogenase [Oceanicola granulosus
           HTCC2516]
          Length = 482

 Score = 83.0 bits (204), Expect = 6e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 56/167 (33%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       +AI + +          V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTEARMAILMAQYGG-----MGVVHRNLDVAAQAEEVRQVKRFVSGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  ++   R     VVD   ++ GI+T  D+      D     V  +
Sbjct: 94  NPVTLTPDQTLADARKLMEHYRVTGFPVVDGDGRVLGIVTNRDMRFASDDD---TPVRVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E   L  A  L++   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLAMLTEPADLDEARSLMKARRIEKLLVTDGEGKLTGLLTLKD 197



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A +L+  + ++   VVD   + +GIV   D+
Sbjct: 94  NPVTLTPDQTLADARKLMEHYRVTGFPVVDGDGRVLGIVTNRDM 137


>gi|296269591|ref|YP_003652223.1| putative CBS domain-containing signal transduction protein
           [Thermobispora bispora DSM 43833]
 gi|296092378|gb|ADG88330.1| putative signal transduction protein with CBS domains
           [Thermobispora bispora DSM 43833]
          Length = 142

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G ++  V+    + + +  L+E   G V V  +G  + GI++E D+ R  H+    
Sbjct: 7   LRKKGSAVATVRPDATVRELLAKLAELNIGAVVVSPDGNAIAGIVSERDVVRRLHERGAG 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L    V ++M    +    +T +    + + ++ I  + VV    + +G+V   D+++  
Sbjct: 67  LLDAPVSEIMTVEVRTCAPETTVDELRRTMTEYRIRHVPVV-SGGRMVGLVSIGDVVKSA 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|24113769|ref|NP_708279.1| hypothetical protein SF2482 [Shigella flexneri 2a str. 301]
 gi|24052848|gb|AAN43986.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
          Length = 333

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 158 SITSDDSLEVIARKLNREKE--MALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 214

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 215 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 274

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++ 
Sbjct: 275 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQH 332


>gi|170683537|ref|YP_001744618.1| RpiR family transcriptional regulator [Escherichia coli SMS-3-5]
 gi|263504711|sp|B1LMM1|MURR_ECOSM RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|170521255|gb|ACB19433.1| transcriptional regulator, RpiR family [Escherichia coli SMS-3-5]
          Length = 285

 Score = 83.0 bits (204), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--QALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|291483389|dbj|BAI84464.1| hypothetical protein BSNT_01590 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 140

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +  V     + +A +++ +   G + VV E   LKG++T+ DI             
Sbjct: 8   MTTQVATVSPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDITLRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM         +  L  A QL+ QH I  L +VD     +GIV   DL
Sbjct: 67  PVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNN-LVGIVALGDL 117



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           SV+D M      +  +  +  A  L++QHN+  + VV +     G++   D+ 
Sbjct: 3   SVKDTMTTQVATVSPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDIT 54


>gi|161950062|ref|YP_404285.2| putative DNA-binding transcriptional regulator [Shigella
           dysenteriae Sd197]
 gi|309784687|ref|ZP_07679320.1| uncharacterized HTH-type transcriptional regulator yfhH [Shigella
           dysenteriae 1617]
 gi|308927057|gb|EFP72531.1| uncharacterized HTH-type transcriptional regulator yfhH [Shigella
           dysenteriae 1617]
          Length = 282

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQR 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQATK--SASISACHAQGMLTDLLFIALIQQ 262


>gi|92117441|ref|YP_577170.1| CBS domain-containing protein [Nitrobacter hamburgensis X14]
 gi|91800335|gb|ABE62710.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
           X14]
          Length = 231

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 47/126 (37%), Gaps = 24/126 (19%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---------------- 280
             + D   IL EKR   V VVD   K+ GI+TE D+                        
Sbjct: 18  ATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLMHRAEAGTERPYSWWVHFLAGDAT 77

Query: 281 --------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +   +EDVM  +      +TLL     L  +  I  + +V++    +GIV  
Sbjct: 78  MAADYVKSHATRIEDVMTTDVVTATPETLLHEIAMLFEERQIKRVPIVNNDGDLVGIVSR 137

Query: 333 LDLLRF 338
            +L++ 
Sbjct: 138 ANLIQA 143



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM+     + +   +    ++L +  IS + VVD+  K IGIV   DL+
Sbjct: 1   MQARDVMVSPVITVGKIATVRDVAKILLEKRISAVPVVDNVGKVIGIVTESDLM 54


>gi|307297538|ref|ZP_07577344.1| putative signal transduction protein with CBS domains
           [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306916798|gb|EFN47180.1| putative signal transduction protein with CBS domains
           [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 325

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/103 (18%), Positives = 42/103 (40%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              +  A  ++   +   + V D   +L+GI++  DI      +  T  +E  M +N   
Sbjct: 42  DRTMWQAKELMRICKISGIPVTDGNNQLEGIVSIEDIIDALEGNYITDPIEKHMTRNIVT 101

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  L   +++  ++      VVD   + +GI+   D++  
Sbjct: 102 FSPEMKLESVIEMFNRYRYGRFPVVDSDGRLVGIISKKDIISA 144



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 32/68 (47%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+          ++ +D+MIK+   + +D  +  A +L+R   IS + V D   +  GIV
Sbjct: 14  DLLDKLRGLFADITAKDIMIKSVVTLTKDRTMWQAKELMRICKISGIPVTDGNNQLEGIV 73

Query: 331 HFLDLLRF 338
              D++  
Sbjct: 74  SIEDIIDA 81



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 28/76 (36%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   ++      H   +I        L   I + +  R+G   VVD   +L GII++ D
Sbjct: 81  ALEGNYITDPIEKHMTRNIVTFSPEMKLESVIEMFNRYRYGRFPVVDSDGRLVGIISKKD 140

Query: 272 IFRNFHKDLNTLSVED 287
           I          + V D
Sbjct: 141 IISAILDKFRLIYVHD 156


>gi|303243591|ref|ZP_07329933.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302486152|gb|EFL49074.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 189

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 51/107 (47%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSV--EDVM 289
           V +     DA  IL  K  GC+ VV++  K  G+ITE D + +   ++L +  V  +D+ 
Sbjct: 18  VNLNATAYDAANILKTKGIGCLVVVNDLMKPVGLITERDFVLKIVARNLKSKEVLVKDIA 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +     L  A +++ +  I  L V+++ +  +GI+   D+ 
Sbjct: 78  STKLIYVSPKATLMDAAKIMAEKKIKRLPVIENDE-LLGIITVSDIT 123



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +SV + M    + +  +     A  +L+   I  L+VV+D  K +G++   D +
Sbjct: 4   NISVSEAMSSPVETVNLNATAYDAANILKTKGIGCLVVVNDLMKPVGLITERDFV 58


>gi|15227986|ref|NP_181191.1| CBS domain-containing protein / octicosapeptide/Phox/Bemp1 (PB1)
           domain-containing protein [Arabidopsis thaliana]
 gi|4581150|gb|AAD24634.1| hypothetical protein [Arabidopsis thaliana]
 gi|330254170|gb|AEC09264.1| CBS / octicosapeptide/Phox/Bemp1 domain-containing protein
           [Arabidopsis thaliana]
          Length = 536

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  VM
Sbjct: 73  INEGTTVFDACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITK 176



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 6/159 (3%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
            G ALA A+   R++   +F  +    +        S ++     + LV    P+  A  
Sbjct: 191 QGSALATAVE-ERHWGSGNFAFIDTLRE-RMFKPALSTIVTENTKVALVSASDPVFVASK 248

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
            + + R   V ++  G K+ GI+T  D + R   ++L+     VE VM  NP+    +T 
Sbjct: 249 KMRDLRVNSV-IIAVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETT 307

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  A+ ++       L V D    A+  +  L +    I
Sbjct: 308 ILDALHIMHDGKFLHLPVFDKDGFAVACLDVLQITHAAI 346


>gi|50122131|ref|YP_051298.1| inosine 5'-monophosphate dehydrogenase [Pectobacterium atrosepticum
           SCRI1043]
 gi|49612657|emb|CAG76107.1| inosine-5'-monophosphate dehydrogenase [Pectobacterium atrosepticum
           SCRI1043]
          Length = 488

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKYESGVV---VDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV +  +L GIIT  D+   F  DL    V   M 
Sbjct: 98  QTVAPETTLREMRELTERNGFAGYPVVAKDNELVGIITGRDVR--FVTDL-EKPVSAFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD    IG++   D  + 
Sbjct: 155 PKERLVTVNEGEARDVVLQKMHEKRVEKALVVDDKFHLIGMITVKDFQKA 204


>gi|324113088|gb|EGC07064.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia fergusonii B253]
          Length = 282

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  + + + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHEGVAMLHSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AVRDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSAAISACHAQGMLTDLLFIALIQQ 262


>gi|168034755|ref|XP_001769877.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162678783|gb|EDQ65237.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 524

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R     +VD    L GIIT+ D+  R   + L      V  VM
Sbjct: 16  ISDGSSVADACRRMATRRVDAALLVDSSALLCGIITDKDVATRVIAEGLRPEETLVSKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  ++ DTL   A+Q + Q     L VV+  +    +V  LD+ +
Sbjct: 76  TKNPVFVMGDTLAVEALQKMVQGKFRHLPVVEKGE----VVALLDITK 119



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/158 (18%), Positives = 52/158 (32%), Gaps = 3/158 (1%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +A    A  +     A   ++      + +D        +          ++  G  +P 
Sbjct: 125 IARMERAAEKGNAIAAAVESVEREWGNNASDKSSFIENLRDKMFRPTLGSIIPEGSKVPT 184

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVM 289
                 +  A   + E R   V +     K  GI+T  D + R   + L   T +++ VM
Sbjct: 185 CSPSETVSAATRKMKEYRMNSVIITSLSNKPSGILTSKDVLMRVVAQGLPPETTTLDKVM 244

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
             NP+    DT L  A+  +       L V D     +
Sbjct: 245 TPNPECAGLDTTLVDALHTMHDGKFLHLPVTDRDGYIV 282


>gi|71907957|ref|YP_285544.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica
           RCB]
 gi|71847578|gb|AAZ47074.1| inosine-5'-monophosphate dehydrogenase [Dechloromonas aromatica
           RCB]
          Length = 487

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 6/167 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NLPLLSAAMDTVTEGRLAIAMAQEGGIGIIH-KNLSPKAQAAEVAKVKRFESGILKDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-- 290
           V     + D I I  + +   + V+D+  K+ GI+T  D+   F  +L+   V+ +M   
Sbjct: 99  VSPLMTVRDVIEITRQYKISGLPVIDKSGKVVGIVTNRDMR--FETNLDQ-PVKAIMTPR 155

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K    + E   +  A +L+R+H +  ++V+DD     G++   D+L+
Sbjct: 156 KRLVTVKEGASVEDAKELIRRHRLERVLVIDDEWHMRGLITVKDILK 202


>gi|16077988|ref|NP_388804.1| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221308762|ref|ZP_03590609.1| hypothetical protein Bsubs1_05098 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313084|ref|ZP_03594889.1| hypothetical protein BsubsN3_05039 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318010|ref|ZP_03599304.1| hypothetical protein BsubsJ_04983 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322284|ref|ZP_03603578.1| hypothetical protein BsubsS_05084 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|321314647|ref|YP_004206934.1| putative oxidoreductase [Bacillus subtilis BSn5]
 gi|1724016|sp|P54606|YHCV_BACSU RecName: Full=CBS domain-containing protein yhcV
 gi|1239998|emb|CAA65706.1| hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]
 gi|2633246|emb|CAB12751.1| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|320020921|gb|ADV95907.1| putative oxidoreductase [Bacillus subtilis BSn5]
          Length = 140

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  V     + +A +++ +   G + VV E   LKG++T+ D  +           
Sbjct: 8   MTTQVATVSPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDIALRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM         +  L  A QL+ QH I  L +VD     +GIV   DL
Sbjct: 67  PVSEVMSTELVSGNPNMSLEDASQLMAQHQIRRLPIVDQNN-LVGIVALGDL 117



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           SV+D M      +  +  +  A  L++QHN+  + VV +     G++   D+
Sbjct: 3   SVKDTMTTQVATVSPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDI 53


>gi|159041859|ref|YP_001541111.1| CBS domain-containing protein [Caldivirga maquilingensis IC-167]
 gi|157920694|gb|ABW02121.1| CBS domain containing protein [Caldivirga maquilingensis IC-167]
          Length = 386

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 2/111 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
                 + +   + + +    E R     V+D   KL GI+T   +       L     V
Sbjct: 84  MLPPHSISLNSDIDNVVRKFYETRLREYPVIDNNGKLIGILTRSRLLTAIKDQLPANAKV 143

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D M K    I     +  A  L+ +H IS L VVD   + +G+V   DL+
Sbjct: 144 GDYMTKPVLTITPSDNVAKARWLMIKHGISRLPVVD-GNRLVGVVSLTDLI 193



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 47/122 (38%), Gaps = 18/122 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           +     +  A  ++ +     + VVD G +L G+++  D+                    
Sbjct: 154 ITPSDNVAKARWLMIKHGISRLPVVD-GNRLVGVVSLTDLIEKIYYVSMPRRSRRGDFSG 212

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++     V  +M      I  D  LT A+ L+    ++ L+V DD    +G++   D+L
Sbjct: 213 EEEFLAAPVSSIMTTQVYSIGSDKPLTKAVDLMVSKGVTGLIVTDDGG-VVGVLSGSDVL 271

Query: 337 RF 338
           + 
Sbjct: 272 KA 273



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            +S  +V     L   I  + E R     VV++  KL G+I   D+ R   K        
Sbjct: 24  QESPVVVNAKDRLSSIIPKMRELRIHTAPVVNDSSKLIGVIDYRDLLRR--KAPLGSRAS 81

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM+  P  I  ++ +   ++   +  +    V+D+  K IGI+    LL  
Sbjct: 82  SVMLP-PHSISLNSDIDNVVRKFYETRLREYPVIDNNGKLIGILTRSRLLTA 132



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 33/66 (50%), Gaps = 3/66 (4%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +  N       L + +++ ++P V+     L+  +  +R+  I    VV+D  K IG++ 
Sbjct: 9   LRPNMD---YNLMLSELIQESPVVVNAKDRLSSIIPKMRELRIHTAPVVNDSSKLIGVID 65

Query: 332 FLDLLR 337
           + DLLR
Sbjct: 66  YRDLLR 71


>gi|331673895|ref|ZP_08374658.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
 gi|331069168|gb|EGI40560.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA280]
          Length = 298

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 104 SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 160

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 161 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 220

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 221 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 277


>gi|327311248|ref|YP_004338145.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947727|gb|AEA12833.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 142

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 54/105 (51%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + DA  IL E   G + +VD  +  K+ G+++E DI R   + ++ +  V D+  +
Sbjct: 16  PDITIKDAAKILREHNIGLLVLVDREDRSKVVGVVSERDIVRAVAEGVDPSRPVLDIATR 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +  D  L  A +L+R+HNI  ++V+    K  G++   DL+
Sbjct: 76  SVISVEADDPLNKAAELMRRHNIRHVVVL-KDGKLYGVLSIRDLV 119



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +SV      +      D  +  A ++LR+HNI +L++VD     K +G+V   D++R 
Sbjct: 1   MSVAQFASTDVVKATPDITIKDAAKILREHNIGLLVLVDREDRSKVVGVVSERDIVRA 58


>gi|238785329|ref|ZP_04629318.1| Inosine-5'-monophosphate dehydrogenase [Yersinia bercovieri ATCC
           43970]
 gi|238713782|gb|EEQ05805.1| Inosine-5'-monophosphate dehydrogenase [Yersinia bercovieri ATCC
           43970]
          Length = 465

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 19  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 75

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL    V  VM 
Sbjct: 76  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDL-EQPVTAVMT 132

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +  ++VVDD     G++   D  + 
Sbjct: 133 PKDRLVTVKEGEAREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKA 182


>gi|331002294|ref|ZP_08325812.1| hypothetical protein HMPREF0491_00674 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330410110|gb|EGG89544.1| hypothetical protein HMPREF0491_00674 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 280

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 72/177 (40%), Gaps = 9/177 (5%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
              ++   R+I+     L +L              A++ I + + ++ + G+G SG +  
Sbjct: 93  EEIIEKNKRNIVNSIEKLYALMDM------DLMKQAIDAIDSAR-KIYLFGVGASGIVCY 145

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +   L+  G    F +       +L  I ++D  + +S+SG++ E   +   A++    
Sbjct: 146 DINYKLSRIGKDVVFNNDIHLQLVNLNFIKKEDTCVCISYSGNTRETVLVAEIAKKAGAK 205

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + I    K+ ++   DI L +P++      G   + +  +   + D + +A+    
Sbjct: 206 TVGICCYGKNELSNICDITLRVPQDERELRLGAISSRNTTLT--LLDMIYLAITHRH 260


>gi|291617429|ref|YP_003520171.1| RpiR [Pantoea ananatis LMG 20103]
 gi|291152459|gb|ADD77043.1| RpiR [Pantoea ananatis LMG 20103]
 gi|327393864|dbj|BAK11286.1| HTH-type transcriptional regulator RpiR [Pantoea ananatis AJ13355]
          Length = 285

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 6/173 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S+ Q   +      + +    S L      +F+ A + I   +  + +  +G S  +  
Sbjct: 94  DSSEQLLAKVFRTSIQAIEETLSILD---VSEFNRAADIIFKAR-HIDLYAVGGSATVAR 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L+  +   G  S     A        +++ DD++I +S SG++  +   +  A R    
Sbjct: 150 DLSHKMLKIGIKSTAYDDAHIMLMSAAVLSDDDVVIAISHSGATRAVNDPVKLAGRNGAR 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +I IT+  +S +A HA +VL    +        A   S I QL I DAL +A+
Sbjct: 210 VIVITNYVESPIARHAHVVLNSTSQGSHLLGENA--ASRIAQLNILDALFVAI 260


>gi|257093572|ref|YP_003167213.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257046096|gb|ACV35284.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 479

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
              ++        L+D + I+ EK    V V D  +   GI+T+ D+         D + 
Sbjct: 15  CQRTVVTCGPDDALVDVVRIMREKNISSVVVCD-NKLPSGIMTDRDLRNKVVASGVDPSA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V  +M     VI E+ LL  A+  + +  I  L VVD   K  GI+   D++R 
Sbjct: 74  IAVRAIMNSPLAVIGENDLLYEALYQMSRQKIHRLAVVDGKGKLSGIITDSDIIRL 129


>gi|146339430|ref|YP_001204478.1| hypothetical protein BRADO2416 [Bradyrhizobium sp. ORS278]
 gi|146192236|emb|CAL76241.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
           sp. ORS278]
          Length = 125

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +++A+  + + R   V V+D+   L GI+T+GD          D     V  VM  NP  
Sbjct: 2   VVEALQKMRDNRVRSVLVMDDD-VLVGIVTQGDCAIKVLLPGLDAKQTPVAQVMTANPVT 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  D  L   M ++ Q     L V+D   K +G++   D+++
Sbjct: 61  VRPDHPLDGCMAMMAQRGFRHLPVID-AGKVVGVISIGDVVK 101



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V+   PL   + +++++ F  + V+D   K+ G+I+ GD+ +N  +DL   +V
Sbjct: 54  MTANPVTVRPDHPLDGCMAMMAQRGFRHLPVIDA-GKVVGVISIGDVVKNIIRDLEH-NV 111

Query: 286 EDVM 289
           +D+M
Sbjct: 112 DDLM 115



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  A+Q +R + +  ++V+DD    +GIV   D 
Sbjct: 1   MVVEALQKMRDNRVRSVLVMDDD-VLVGIVTQGDC 34


>gi|218768214|ref|YP_002342726.1| inosine 5'-monophosphate dehydrogenase [Neisseria meningitidis
           Z2491]
 gi|121052222|emb|CAM08545.1| putative inosine-5'-monophosphate dehydrogenase [Neisseria
           meningitidis Z2491]
          Length = 487

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ +           + P  +   +                
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIGIIH-KNMPPEMQARAISKVKRHESGVVKDPVT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  +M  
Sbjct: 99  VAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSAIMTP 155

Query: 292 N--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 156 RERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|148260111|ref|YP_001234238.1| signal-transduction protein [Acidiphilium cryptum JF-5]
 gi|326402936|ref|YP_004283017.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
 gi|146401792|gb|ABQ30319.1| putative signal-transduction protein with CBS domains [Acidiphilium
           cryptum JF-5]
 gi|325049797|dbj|BAJ80135.1| hypothetical protein ACMV_07880 [Acidiphilium multivorum AIU301]
          Length = 143

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKV 295
           +  A   L+ KR G   VVD+   L G+++E DI R    F  D+   +  D+M      
Sbjct: 24  IPQAARFLTAKRIGAAPVVDDRGALVGMLSERDIMRFVGEFDGDIKDRTAADLMTTLVAS 83

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +  AM L+  H    L V  +     G+V   DL++  +
Sbjct: 84  CTPEATILDAMLLMTTHRCRHLPVF-EDGVLAGVVSIGDLVKARL 127



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+  +  +  A + L    I    VVDD    +G++   D++RF
Sbjct: 16  IVLSANHFIPQAARFLTAKRIGAAPVVDDRGALVGMLSERDIMRF 60


>gi|317490878|ref|ZP_07949314.1| inosine-5'-monophosphate dehydrogenase [Enterobacteriaceae
           bacterium 9_2_54FAA]
 gi|316920425|gb|EFV41748.1| inosine-5'-monophosphate dehydrogenase [Enterobacteriaceae
           bacterium 9_2_54FAA]
          Length = 488

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 62/182 (34%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTSSIRMNIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQADEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     L +   +     F    VV +  +L GIIT  D+   F  
Sbjct: 89  HESGVV---KDPQTVTPTTTLREVKELTERNGFAGYPVVTDELELVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL    V  VM        + E     V +Q + +  +   +VVD+     G++   D  
Sbjct: 144 DL-EQPVTAVMTPKERLVTVKEGEAREVVLQRMHEKRVEKALVVDENFHLCGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|260772907|ref|ZP_05881823.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
 gi|260612046|gb|EEX37249.1| Signal transduction protein [Vibrio metschnikovii CIP 69.14]
          Length = 629

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 64/182 (35%), Gaps = 28/182 (15%)

Query: 183 LAIGDALAIALLESRNFSEND----FYVLHPGGKLGTLFVCASDVMHSG----------- 227
            AI D L   + E+      D    F           L    S+                
Sbjct: 97  TAIEDTLIYCMPEAIFQKLYDEYDTFADYVEVQDNARLRQTVSNTQEQNDLTTSKVKHLL 156

Query: 228 -DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
               P V     +  A   +SE+    + ++D         +   + GI+T+ D+  R  
Sbjct: 157 TREAPFVYNDASIQQAAIKMSEENVSSLLIIDPSIMKDNEDDSSPVVGILTDRDLCRRVI 216

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              L+ + SV +VM      +  +  +  AM  + ++N+  L V+ +    IGIV   D+
Sbjct: 217 ATGLDFSHSVTEVMTSEVIALDHNAYVYEAMLFMLRYNVHHLPVLKENN-PIGIVDITDI 275

Query: 336 LR 337
           +R
Sbjct: 276 VR 277


>gi|238797972|ref|ZP_04641462.1| Inosine-5'-monophosphate dehydrogenase [Yersinia mollaretii ATCC
           43969]
 gi|238718177|gb|EEQ10003.1| Inosine-5'-monophosphate dehydrogenase [Yersinia mollaretii ATCC
           43969]
          Length = 487

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL    V  VM 
Sbjct: 98  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDL-EQPVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +  ++VVDD     G++   D  + 
Sbjct: 155 PKDRLVTVKEGEAREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKA 204


>gi|227328664|ref|ZP_03832688.1| inositol-5'-monophosphate dehydrogenase [Pectobacterium carotovorum
           subsp. carotovorum WPP14]
          Length = 488

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTESGLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---VDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV +  +L GIIT  D+   F  DL    V   M 
Sbjct: 98  QTVTPETTLREMKELTERNGFAGYPVVAKDNELVGIITGRDVR--FVTDL-EKPVSAFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +V+DD    IG++   D  + 
Sbjct: 155 PKERLVTVKEGEARDVVLQKMHEKRVEKALVIDDQFHLIGMITVKDFQKA 204


>gi|228983923|ref|ZP_04144113.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
 gi|229154423|ref|ZP_04282540.1| CBS domain protein [Bacillus cereus ATCC 4342]
 gi|228628821|gb|EEK85531.1| CBS domain protein [Bacillus cereus ATCC 4342]
 gi|228775743|gb|EEM24119.1| CBS domain protein [Bacillus thuringiensis serovar tochigiensis
           BGSC 4Y1]
          Length = 147

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 55/126 (43%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +       S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIKMTRVRDFMSTHIVQCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM  N   I  D  +  A +L+ Q+ I  L VV +  + +G+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTTNIVSIAPDDSIEKATELMAQYQIRRLPVV-ENGQLVGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    V D M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+ 
Sbjct: 5   EEIKMTRVRDFMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVV 63

Query: 338 FGI 340
            GI
Sbjct: 64  RGI 66


>gi|302815219|ref|XP_002989291.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
 gi|300142869|gb|EFJ09565.1| hypothetical protein SELMODRAFT_129621 [Selaginella moellendorffii]
          Length = 406

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 4/94 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLL 302
           ++  R   V + D    L GI T+ D+  R   K L      V  VM +NP  I  D L 
Sbjct: 1   MAAARIDAVLLTDSDSVLCGIFTDKDVVARVIAKGLKPEETCVSSVMTRNPVYIASDALA 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             A++ + +     L VVD+  + I +V+    L
Sbjct: 61  DHALRKMIRGKFRHLPVVDN-GQVISLVNMKKCL 93



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 51/130 (39%), Gaps = 4/130 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
            T       ++    +   +     +  A   + E       +V  G+   GI T  D+ 
Sbjct: 133 QTFQPTLGSLIMQSFNAVTICPNETVDTATKKMLEFSSD-YVIVASGRNPVGIFTSKDLL 191

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K L   + ++E VM +N +    DT +  A+ ++       L ++D  +  +G V
Sbjct: 192 MRVVAKGLCPTSTTIEKVMTRNVECASLDTAVVDALHIMHDGRFCHLPILDQDRNVVGCV 251

Query: 331 HFLDLLRFGI 340
           + + L+  G+
Sbjct: 252 NVMALVECGL 261


>gi|288553260|ref|YP_003425195.1| RpiR transcriptional regulator [Bacillus pseudofirmus OF4]
 gi|288544420|gb|ADC48303.1| RpiR transcriptional regulator [Bacillus pseudofirmus OF4]
          Length = 284

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 16/194 (8%)

Query: 22  STVQCALRSIIAEKRG-----------LSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           + +Q    +I  E              + +LE +L    S  +  AV  I   + RV   
Sbjct: 81  TPIQDIHETIQEEDDEKAITEKVFKSNIRTLEDTLHVIESDHYKKAVHAIVNAR-RVEFY 139

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G SG I          TG P+     +         +T++D+++++S SG++ ++  +
Sbjct: 140 GNGGSGIIALDAHHKFLRTGIPTAAYQDSHFQVMSASQLTKEDVVVLISHSGTNRDILQV 199

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVL-TLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           L  A       I IT+  KS ++   DI L T+ KE E     LA   S + QL+I DAL
Sbjct: 200 LDVAEEHGATTICITTLAKSPLSRQVDIPLYTVSKETEYRSEALA---SRLAQLSIIDAL 256

Query: 190 AIALLESRNFSEND 203
            + +   R     D
Sbjct: 257 YVNVSIQRKEQMKD 270


>gi|257867470|ref|ZP_05647123.1| AcuB family protein [Enterococcus casseliflavus EC30]
 gi|257873799|ref|ZP_05653452.1| AcuB family protein [Enterococcus casseliflavus EC10]
 gi|257877548|ref|ZP_05657201.1| AcuB family protein [Enterococcus casseliflavus EC20]
 gi|257801526|gb|EEV30456.1| AcuB family protein [Enterococcus casseliflavus EC30]
 gi|257807963|gb|EEV36785.1| AcuB family protein [Enterococcus casseliflavus EC10]
 gi|257811714|gb|EEV40534.1| AcuB family protein [Enterococcus casseliflavus EC20]
          Length = 215

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V    P+ DA+ ++ +     + VVD+  KL G+ITEG I             
Sbjct: 7   MTKTVVTVDSQTPIFDAVDLMKQHDIHRLPVVDD-GKLVGLITEGTIAEATPSKATSLSV 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  LN  +V D+M+K    I  D LL  A+ ++R  N+ VL V+DD    +GI+   
Sbjct: 66  YEMNYLLNKTTVADIMLKKVTTIEPDALLEDAISVMRSENVGVLPVMDDD-ALVGIITNN 124

Query: 334 DLLRF 338
           D+   
Sbjct: 125 DIFDA 129



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV D M K    +   T +  A+ L++QH+I  L VVDD  K +G++ 
Sbjct: 1   MSVSDFMTKTVVTVDSQTPIFDAVDLMKQHDIHRLPVVDD-GKLVGLIT 48



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  ++    L DAI+++  +  G + V+D+   L GIIT  DIF  F K
Sbjct: 81  MLKKVTTIEPDALLEDAISVMRSENVGVLPVMDDD-ALVGIITNNDIFDAFLK 132


>gi|167623308|ref|YP_001673602.1| inosine 5'-monophosphate dehydrogenase [Shewanella halifaxensis
           HAW-EB4]
 gi|167353330|gb|ABZ75943.1| inosine-5'-monophosphate dehydrogenase [Shewanella halifaxensis
           HAW-EB4]
          Length = 490

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    ++
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTV 100

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                   L D + +L+EK  F    VV+E  +L GIIT  D+   F  D +  +V+ VM
Sbjct: 101 T---PTTTLAD-LKLLTEKNGFAGYPVVNEANELVGIITGRDVR--FITDWSR-TVDQVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   +LE T L    +L+  H +  ++VVDD  K  G++   D  + 
Sbjct: 154 TPKERLVTVLEGTKLDEVQKLMHSHRVEKVLVVDDNFKLKGLITVKDFQKA 204


>gi|320157265|ref|YP_004189644.1| inosine-5'-monophosphate dehydrogenase [Vibrio vulnificus MO6-24/O]
 gi|319932577|gb|ADV87441.1| inosine-5'-monophosphate dehydrogenase [Vibrio vulnificus MO6-24/O]
          Length = 487

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVSPDATIADVVALTDKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKENLAAVKEGATRAEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKA 204


>gi|168700192|ref|ZP_02732469.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
          Length = 155

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH-KDLNTLS 284
                 V     +  A+  +     GC+ V  E  ++ GI TE D+  R    +      
Sbjct: 17  PAPPRWVDADDTVARAVEEMRAGNVGCLLVT-EQGRVVGIFTERDLLTRVLAPQKPLGAP 75

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   M   P  +     +   ++ +++     L VVD+  + +G++ 
Sbjct: 76  IRLFMTAAPVTVAPKDSVRTVIKRMQRGGYRHLPVVDEAGRPVGVLS 122



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P+ +  D  +  A++ +R  N+  L+V  +  + +GI    DLL
Sbjct: 20  PRWVDADDTVARAVEEMRAGNVGCLLVT-EQGRVVGIFTERDLL 62


>gi|23011539|ref|ZP_00051869.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 82.6 bits (203), Expect = 7e-14,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     + +AI +L+EK+ G + V D G  + GI++E D+ R   +D       S+   M
Sbjct: 17  VPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRALARDGAAALDQSISHYM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                       +   M+ + +     L VV +    +G+V   D+++  I
Sbjct: 77  TAKVVTCTRRASIEDVMETMTEGRFRHLPVV-EDGHLVGVVSIGDVVKRRI 126



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     +  A+ LL +  I  L+V D     IGI+   D++R 
Sbjct: 15  VTVPPHRTVDEAIHLLAEKQIGALVVADAGGHVIGILSERDVMRA 59


>gi|326793953|ref|YP_004311773.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
 gi|326544717|gb|ADZ89937.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
          Length = 133

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 13/123 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  V++   L +  T+L  + F  + VV E  KL GII++ DI R           
Sbjct: 7   MVKEVVCVEMDARLPEVKTLLQNRGFHHLPVV-EQGKLVGIISDRDILRLVSPFVGKVNE 65

Query: 278 --KDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +DL+TL  +   VM + P  +  +  ++  +  + + +IS + V+DD +  IGIV + 
Sbjct: 66  QTRDLDTLNRAAHQVMTRQPITVKANAEVSDVVNWMLKVSISCVPVIDDDEAVIGIVTWR 125

Query: 334 DLL 336
           DL+
Sbjct: 126 DLI 128



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM+K    +  D  L     LL+      L VV +  K +GI+   D+LR 
Sbjct: 3   VQDVMVKEVVCVEMDARLPEVKTLLQNRGFHHLPVV-EQGKLVGIISDRDILRL 55



 Score = 36.0 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            V      L TL   A  VM        VK    + D +  + +    CV V+D+ + + 
Sbjct: 62  KVNEQTRDLDTLNRAAHQVM--TRQPITVKANAEVSDVVNWMLKVSISCVPVIDDDEAVI 119

Query: 265 GIITEGDI 272
           GI+T  D+
Sbjct: 120 GIVTWRDL 127


>gi|297816584|ref|XP_002876175.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297322013|gb|EFH52434.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 556

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           +  G  + DA   ++ +R     + D    L GI+T+ D+  R   + L  +   V  VM
Sbjct: 75  IPEGTTIFDACRRMAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVM 134

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 135 TRNPIFVTSDSLALEALQKMVQGKFRHLPVVENGE----VIALLDITK 178



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + LV    P+  A   + + R   V + + G K+ GI+T  D + R   ++
Sbjct: 232 STIITENSKVALVAPSDPVSVAAKRMRDLRVNSVIISN-GNKIHGILTSKDILMRVVAQN 290

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L      VE VM  NP+    +T +  A+ ++       L ++D   
Sbjct: 291 LPPELTLVEKVMTPNPECASLETTILDALHIMHDGKFLHLPIIDKDG 337


>gi|289523668|ref|ZP_06440522.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
 gi|289503360|gb|EFD24524.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Anaerobaculum hydrogeniformans ATCC BAA-1850]
          Length = 378

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L  A+ I+       + VVDE  KL GI+T GDI  +F        ++++  K+ 
Sbjct: 271 HPRRTLAQAVEIMKSHAVNSILVVDESDKLLGIVTAGDIREHFGG---KKYLDEIYTKDV 327

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             +  +  L+  ++L+ + NI  + V DD    +G++ 
Sbjct: 328 ISVRPNESLSYIIKLMAEKNIGFVPVTDDNGILVGLIT 365



 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/219 (18%), Positives = 81/219 (36%), Gaps = 19/219 (8%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E   ++ Y +++              +    +++  +   P    +      S   Q  
Sbjct: 102 AENVGLVPYLKKWP---------KDKRMKRVEELLELVGLPPRDYMNRYPSELSGGQQQR 152

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +G A A+A        +  F  L P              +       +V +   + +A+ 
Sbjct: 153 VGVARALASDPEIILMDEPFSALDP--ITREQLQEELFNLQQELQKTIVFVTHDIDEALK 210

Query: 245 I---LSEKRFGCVAVVDEGQKLK-----GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
           +   +   R G V   D  + L      G + E    +   +  + ++ EDVMIKNP   
Sbjct: 211 LGDRICIMRDGIVLQFDAPEVLLKNPAHGFVEEFIGKKRLMRAPDLMTAEDVMIKNPVKA 270

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                L  A+++++ H ++ ++VVD+  K +GIV   D+
Sbjct: 271 HPRRTLAQAVEIMKSHAVNSILVVDESDKLLGIVTAGDI 309



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           V+    L   I +++EK  G V V D+   L G+IT
Sbjct: 330 VRPNESLSYIIKLMAEKNIGFVPVTDDNGILVGLIT 365


>gi|126460002|ref|YP_001056280.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249723|gb|ABO08814.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 135

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF-HKDLNTL 283
                 V     L++A   L+    G V VVD     K  GI++E DI +    K   + 
Sbjct: 15  RKPPVTVPPTATLLEAAEALTSHGVGAVVVVDPSSPDKPIGILSERDIVKAISAKMPLST 74

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VE  M  +   +  +  L+ A  L+  +NI  L+VV +  K +G++   DLL
Sbjct: 75  PVEAFMSTDLVTVEAEEPLSRAADLMWMYNIRHLVVV-ERGKFVGVISVRDLL 126



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLLRF 338
           + V D++ K P  +     L  A + L  H +  ++VVD     K IGI+   D+++ 
Sbjct: 8   MKVRDLIRKPPVTVPPTATLLEAAEALTSHGVGAVVVVDPSSPDKPIGILSERDIVKA 65


>gi|260440558|ref|ZP_05794374.1| inosine 5'-monophosphate dehydrogenase [Neisseria gonorrhoeae DGI2]
 gi|291043863|ref|ZP_06569579.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae DGI2]
 gi|293399075|ref|ZP_06643240.1| inosine-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae F62]
 gi|291012326|gb|EFE04315.1| inositol-5-monophosphate dehydrogenase [Neisseria gonorrhoeae DGI2]
 gi|291610489|gb|EFF39599.1| inosine-5'-monophosphate dehydrogenase [Neisseria gonorrhoeae F62]
          Length = 487

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E   +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGASIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|261402513|ref|YP_003246737.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus vulcanius M7]
 gi|261369506|gb|ACX72255.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus vulcanius M7]
          Length = 176

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 43/163 (26%), Positives = 76/163 (46%), Gaps = 13/163 (7%)

Query: 48  ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
             S +F+  +EKI   K ++ I G+G+SG++G   A  L   G  S+FV           
Sbjct: 21  RESEKFYLLIEKILKSK-KIFIFGVGRSGYVGRCFAMRLFHLGLNSYFVGETITPKY--- 76

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
              +DDL+I++S SG ++ +  +   A++ +  ++AI  E  S VA  A++++ L  E  
Sbjct: 77  --EKDDLLILISGSGKTESVLTVAKKAKKVNNNIVAIVCECGS-VAEFAELIIRLDVEKS 133

Query: 168 SCPHGLAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
                  P  +   Q A+   D L   +++  N  E +    H
Sbjct: 134 DY----LPMGTTFEQTAMIFLDLLIAEIMKKLNLKEREVIKRH 172


>gi|238763558|ref|ZP_04624519.1| Inosine-5'-monophosphate dehydrogenase [Yersinia kristensenii ATCC
           33638]
 gi|238788162|ref|ZP_04631957.1| Inosine-5'-monophosphate dehydrogenase [Yersinia frederiksenii ATCC
           33641]
 gi|238698190|gb|EEP90946.1| Inosine-5'-monophosphate dehydrogenase [Yersinia kristensenii ATCC
           33638]
 gi|238723749|gb|EEQ15394.1| Inosine-5'-monophosphate dehydrogenase [Yersinia frederiksenii ATCC
           33641]
          Length = 464

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 18  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 74

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 75  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 131

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 132 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 181


>gi|37678959|ref|NP_933568.1| inositol-5-monophosphate dehydrogenase [Vibrio vulnificus YJ016]
 gi|326423708|ref|NP_759415.2| inosine-5'-monophosphate dehydrogenase [Vibrio vulnificus CMCP6]
 gi|37197701|dbj|BAC93539.1| inosine-5'-monophosphate dehydrogenase [Vibrio vulnificus YJ016]
 gi|319999065|gb|AAO08942.2| inosine-5'-monophosphate dehydrogenase [Vibrio vulnificus CMCP6]
          Length = 489

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 43  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---TDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 100 VTVSPDATIADVVALTDKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 157 PKENLAAVKEGATRAEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKA 206


>gi|281601844|gb|ADA74828.1| Transcriptional regulator, RpiR family [Shigella flexneri 2002017]
          Length = 333

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 158 SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 214

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 215 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 274

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++ 
Sbjct: 275 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQH 332


>gi|238794822|ref|ZP_04638423.1| Inosine-5'-monophosphate dehydrogenase [Yersinia intermedia ATCC
           29909]
 gi|238725835|gb|EEQ17388.1| Inosine-5'-monophosphate dehydrogenase [Yersinia intermedia ATCC
           29909]
          Length = 464

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 18  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 74

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 75  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 131

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 132 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 181


>gi|138896311|ref|YP_001126764.1| thioesterase family protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196249933|ref|ZP_03148628.1| putative signal-transduction protein with CBS and DRTGG domains
           [Geobacillus sp. G11MC16]
 gi|134267824|gb|ABO68019.1| Thioesterase family protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196210447|gb|EDY05211.1| putative signal-transduction protein with CBS and DRTGG domains
           [Geobacillus sp. G11MC16]
          Length = 435

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   +    +++  P+     +  E R     VV++  K++GI+T  
Sbjct: 182 QLIKKEIVLVEDIIIPLEKTAYLRVNDPIERWYVLNKETRHSRFPVVNDDWKVQGIVTAK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+      D   L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+
Sbjct: 242 DV---LDMD-RQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDHHRLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 23/62 (37%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     +  A  I+  +    + VVD+  +L+GII+  D+ +          V
Sbjct: 256 MTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDHHRLQGIISRQDVLKALQMAQRQPQV 315

Query: 286 ED 287
            +
Sbjct: 316 GE 317


>gi|312884311|ref|ZP_07744020.1| inosine 5'-monophosphate dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368084|gb|EFP95627.1| inosine 5'-monophosphate dehydrogenase [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 487

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVEKVKKFEAGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +  F    VV +  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVSPDASIADVIALTDKHGFAGFPVVTKNNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + ED       + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVHEDATREEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKA 204


>gi|118445062|ref|YP_879095.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium novyi NT]
 gi|118135518|gb|ABK62562.1| Glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium novyi NT]
          Length = 378

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ A  I++E+    + VVD    LKGI T  DI ++   D   L ++DVM ++   + 
Sbjct: 266 TILQASEIMAERHVDSILVVDRNNTLKGIATLKDIRKSREND-KKLMLKDVMNRDVVCVN 324

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +D  +   ++++   N+  + VVD+ +K +G++ 
Sbjct: 325 KDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLIT 358



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ED++I+NP   + +  +  A +++ + ++  ++VVD      GI    D+ +
Sbjct: 249 KAEDIIIENPVKAVGNRTILQASEIMAERHVDSILVVDRNNTLKGIATLKDIRK 302



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L+  RN +      L    K                 +  V     ++D + +++ K  G
Sbjct: 283 LVVDRNNTLKGIATLKDIRKSRENDKKLMLKDVMNRDVVCVNKDKSIVDVLEVMNIKNVG 342

Query: 253 CVAVVDEGQKLKGIIT 268
            + VVDE +KL G+IT
Sbjct: 343 YIPVVDENKKLLGLIT 358


>gi|300866518|ref|ZP_07111208.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300335475|emb|CBN56368.1| conserved membrane hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 935

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKV 295
             L +AI   S        VVD   KL GI+T+ D+ +   + L     + ++M   P  
Sbjct: 467 MTLDEAIQAFSRSHHRGFPVVDA-GKLVGILTQTDLAQANSRQLPGDTLLSEIMTVQPIT 525

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     L+  + LL ++++S L V  + +  +GI+   D++R 
Sbjct: 526 VEPRDTLSEILCLLNRYHLSRLPVT-EGRHLVGIITRSDIIRA 567



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L++L   +VM +  + +     L  A+Q   + +     VVD   K +GI+   DL + 
Sbjct: 447 LSSLHAANVMQRRVETLSSLMTLDEAIQAFSRSHHRGFPVVD-AGKLVGILTQTDLAQA 504


>gi|291300289|ref|YP_003511567.1| putative signal transduction protein with CBS domains
           [Stackebrandtia nassauensis DSM 44728]
 gi|290569509|gb|ADD42474.1| putative signal transduction protein with CBS domains
           [Stackebrandtia nassauensis DSM 44728]
          Length = 140

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
              +   V     +     I+ +   G V ++++  ++ GI+T+ D+  R   +  N   
Sbjct: 9   MTPNPVCVPQDASVSATAAIMRDNDIGSVIIMND-GRVSGIVTDRDLVVRGLAEGFNPQE 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V  V   +   +  D+    A++ +R+ ++  L V D     +GIV   DL
Sbjct: 68  APVGAVASPSAICLAPDSSTADAVRQMRESSVRRLPVCDSAGHPVGIVSLGDL 120



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +  VM  NP  + +D  ++    ++R ++I  +++++D  +  GIV   DL+  G+
Sbjct: 3   AQISSVMTPNPVCVPQDASVSATAAIMRDNDIGSVIIMND-GRVSGIVTDRDLVVRGL 59



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 18/58 (31%), Gaps = 1/58 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
                 DA+  + E     + V D      GI++ GD+      +     +      N
Sbjct: 83  PDSSTADAVRQMRESSVRRLPVCDSAGHPVGIVSLGDLAEELDPESALADIS-AATPN 139


>gi|297562952|ref|YP_003681926.1| inosine-5'-monophosphate dehydrogenase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296847400|gb|ADH69420.1| inosine-5'-monophosphate dehydrogenase [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 498

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 58/173 (33%), Gaps = 19/173 (10%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +A+A+          RN S  D        +   + +       
Sbjct: 51  RIPLLSAAMDTVTEARMAVAMARQGGAGVLHRNLSVED--------QASQVDLVKRSEAG 102

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                   +    L +   + +  R   V V D    L GI+T  D+   F  D   L V
Sbjct: 103 MVTDPVTCQPEDTLAEVERLCAHYRISGVPVTDGAGILVGIVTNRDMR--FESDRGRL-V 159

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM   N            A  LLR+H +  L +VD   +  G++   D ++
Sbjct: 160 RDVMTTENLVTAPVGVSREQAFDLLRRHKVEKLPLVDGQNRLRGLITVKDFIK 212


>gi|254511869|ref|ZP_05123936.1| inosine-5'-monophosphate dehydrogenase [Rhodobacteraceae bacterium
           KLH11]
 gi|221535580|gb|EEE38568.1| inosine-5'-monophosphate dehydrogenase [Rhodobacteraceae bacterium
           KLH11]
          Length = 482

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIGVVHKNLSIDEQAREVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  ++    F    V++EG ++ GI+T  D+      D     +  +M 
Sbjct: 99  ---RADQTLADAKALVERYNFTGFPVIEEGGRVLGIVTNRDMRFATSDD---TPIHAMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E   L  A  L++   I  L+VVD   K  G++   D
Sbjct: 153 TENLAMLQEPADLEEAKSLMKARRIEKLLVVDGAGKLTGLLTLKD 197



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++N +   V+++  + +GIV   D+
Sbjct: 94  NPVTLRADQTLADAKALVERYNFTGFPVIEEGGRVLGIVTNRDM 137


>gi|219853220|ref|YP_002467652.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219547479|gb|ACL17929.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 187

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 46/121 (38%), Gaps = 4/121 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH 277
                         +     +  A   +     G   V+ E     GI+TE DI  +   
Sbjct: 13  HVQLKEMMRRHPATIDYNATVARAAMTMCSADVGSCIVL-ENNLPIGIVTEQDINCKVVA 71

Query: 278 KDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K+     + V ++M      I  +  ++ A  ++ +H +  L VVD+  + IGIV   DL
Sbjct: 72  KNHRPGEVRVSEIMSTPLITINAERTVSEAASMMVKHRVRRLPVVDEMNRVIGIVTVRDL 131

Query: 336 L 336
           L
Sbjct: 132 L 132


>gi|315645621|ref|ZP_07898745.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
 gi|315279099|gb|EFU42409.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
          Length = 289

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 5/189 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +  +    S+ +   +    R +  +   L  L+++L    +     AV+K+ A   +V 
Sbjct: 87  RPPSVIDTSIDEQDDMMTVARKLTLQHEIL--LKNTLDLVNTDNLKMAVDKLLAA-NKVY 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG     L   L   G        +        ++ + DL+  +S SGS+ +L 
Sbjct: 144 VYGVGSSGITALDLHYQLMRLGLNVEAHRDSHIIAMSASLLKKGDLVFAISTSGSTRDLV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             +  A++    +I +T   +S +A +AD VL +         G   T    MQ  + + 
Sbjct: 204 DPVKEAKKNGADVICLTGHLRSPIATYADTVLLVSSREMPTEGGALAT--KFMQTYMLNI 261

Query: 189 LAIALLESR 197
           L   L   +
Sbjct: 262 LTTLLTMKK 270


>gi|266620273|ref|ZP_06113208.1| transcriptional regulator [Clostridium hathewayi DSM 13479]
 gi|288868135|gb|EFD00434.1| transcriptional regulator [Clostridium hathewayi DSM 13479]
          Length = 284

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 69/182 (37%), Gaps = 7/182 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S  + A + +      L    S L  +    F   +  +   + R+   G+G S    
Sbjct: 93  EDSFPEMAQKVLNTNVNALKETFSLLNED---NFDKVIRYLHNAE-RICFYGVGASMLTA 148

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            K A+         + V  +        M+  +++ +V S+SG++ +   +   ARR   
Sbjct: 149 MKAANKFLRIEPKVYCVQDSHMQAMVASMMKENEVAVVFSYSGATKDTIQVAELARRAGA 208

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I +T   KS +   +D+ L           G   T++ I QL + D +       R F
Sbjct: 209 TVICVTRFVKSPLTSFSDVTLLCGANEGPLQGG--STSAEISQLFLIDLMYTEY-YRRYF 265

Query: 200 SE 201
            +
Sbjct: 266 EK 267


>gi|262195130|ref|YP_003266339.1| signal transduction protein with CBS domains [Haliangium ochraceum
           DSM 14365]
 gi|262078477|gb|ACY14446.1| putative signal transduction protein with CBS domains [Haliangium
           ochraceum DSM 14365]
          Length = 149

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
             + +  V     +  A+  LS K      V D   ++ G+++  D+       L     
Sbjct: 8   MTEKVITVSPEAQVQHAVWSLSAKGISGAPVQDAEGRVVGVLSRSDLVDTEAHQLVAGDT 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V + M  +   +  D   + A+ L+ +  I  LMV+D+ +  +G++  +D+++ 
Sbjct: 68  PVSEAMTAHIWSVHPDAPASDAVLLMVEKEIHRLMVMDEERSLVGVITSMDIMKA 122



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V D+M +    +  +  +  A+  L    IS   V D   + +G++   DL+
Sbjct: 3   KVRDIMTEKVITVSPEAQVQHAVWSLSAKGISGAPVQDAEGRVVGVLSRSDLV 55



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V    P  DA+ ++ EK    + V+DE + L G+IT  DI +      +   
Sbjct: 80  VHPDAPASDAVLLMVEKEIHRLMVMDEERSLVGVITSMDIMKALVAGHDLRP 131


>gi|188586271|ref|YP_001917816.1| CBS domain containing protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179350958|gb|ACB85228.1| CBS domain containing protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 890

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 8/121 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--------DEGQKLKGIITEGDIFRNFH 277
               +  +     + +A  +L +     + VV        DE  K+ G+I+  DI +  H
Sbjct: 313 MSAPVKTISSSTTIQEADHLLHKYGHSGLPVVQDKQNDIDDEAGKIVGVISRRDIEKAKH 372

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V+  M +    I  DT +     L+  ++I  L V+D     IGIV   +LL+
Sbjct: 373 HGFGHSPVKGYMSQKVISISPDTSIKEIQHLMVSNDIGRLPVIDSNANLIGIVTRTNLLK 432

Query: 338 F 338
            
Sbjct: 433 I 433



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 28/65 (43%), Gaps = 8/65 (12%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQKAIGIVHFLD 334
           L+ + +M    K I   T +  A  LL ++  S L VV        D+  K +G++   D
Sbjct: 307 LTAKAIMSAPVKTISSSTTIQEADHLLHKYGHSGLPVVQDKQNDIDDEAGKIVGVISRRD 366

Query: 335 LLRFG 339
           + +  
Sbjct: 367 IEKAK 371



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           +     + +   ++     G + V+D    L GI+T  ++ +  H  L
Sbjct: 391 ISPDTSIKEIQHLMVSNDIGRLPVIDSNANLIGIVTRTNLLKIQHGQL 438


>gi|325496359|gb|EGC94218.1| DNA-binding transcriptional regulator [Escherichia fergusonii
           ECD227]
          Length = 282

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 68/162 (41%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  + + + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHEGVAMLHSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AERDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 262


>gi|229101581|ref|ZP_04232304.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-28]
 gi|228681823|gb|EEL35977.1| Transcriptional regulator, RpiR [Bacillus cereus Rock3-28]
          Length = 287

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A ++I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTVIDKKELEKAADRIVNAD-KILFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +I IT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQGATVIGITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|194289281|ref|YP_002005188.1| transcriptional regulator [Cupriavidus taiwanensis LMG 19424]
 gi|193223116|emb|CAQ69121.1| putative transcriptional regulator, RpiR/GlvR family (HTH and SIS
           (phosphosugar-binding) domains) [Cupriavidus taiwanensis
           LMG 19424]
          Length = 311

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 70/177 (39%), Gaps = 7/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +     A +        L S+ ++L  +   Q    +  +   + R+   G G SG +  
Sbjct: 87  DRPADIAGKVFDRTIATLMSVRNALSAD---QIEHGIRLLAGAR-RIEFYGCGNSGIVAL 142

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G P+              ++   D+ +++S SG + ++      AR     
Sbjct: 143 DIQHKFFRLGMPTVAYADPHVFSMSAALLAPGDVAVLVSNSGRTWDMLTAATLARGSGAS 202

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++A+T  + S +A  AD+ +    E +S  +   P TS I  L +GD LA  +  +R
Sbjct: 203 VLALT-HSGSPLARLADVCVFSDVEEDSEVY--TPMTSRISHLVLGDVLAAGVALAR 256


>gi|152982734|ref|YP_001353342.1| inosine-5'-monophosphate dehydrogenase [Janthinobacterium sp.
           Marseille]
 gi|151282811|gb|ABR91221.1| inosine-5'-monophosphate dehydrogenase [Janthinobacterium sp.
           Marseille]
          Length = 139

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               + ++     + DA   + E  FG + V  E  ++ G I++ DI  R   +   ++ 
Sbjct: 8   MKHDVQVISPEATIQDAAKKMKEGNFGMLPV-HENDRMIGSISDRDIVIRAVAEGKPSST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V DVM K      ED+ L+  ++L+ QH +  L +V+  ++ +GIV   D
Sbjct: 67  KVRDVMTKGIVWAFEDSSLSEGVRLMSQHQVRRLPIVNSQKRLVGIVAIGD 117



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++++ M  + +VI  +  +  A + +++ N  +L V ++  + IG +   D++
Sbjct: 2   ATLKEFMKHDVQVISPEATIQDAAKKMKEGNFGMLPVHEND-RMIGSISDRDIV 54


>gi|91778034|ref|YP_553242.1| hypothetical protein Bxe_B2095 [Burkholderia xenovorans LB400]
 gi|91690694|gb|ABE33892.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 164

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMI 290
           +    + DAI +++ ++ G + +V    ++ GI+TE D  R      +      V D+M 
Sbjct: 20  QASASVYDAIAVMAHRQVGAL-IVAHEGRIAGIVTERDYARKIVLMDRSSRHTPVRDIMS 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + I  D      M L+ +H I  L V+    + IG+V   DL++
Sbjct: 79  TAVRYIGPDQTTEECMALMTEHRIRYLPVIT-AGQVIGMVSIGDLVQ 124


>gi|260598892|ref|YP_003211463.1| inosine 5'-monophosphate dehydrogenase [Cronobacter turicensis
           z3032]
 gi|260218069|emb|CBA32809.1| Inosine-5'-monophosphate dehydrogenase [Cronobacter turicensis
           z3032]
          Length = 488

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DL +  V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDL-SQPVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD     G++   D  + 
Sbjct: 155 PKARLVTVREGESRDVVLAKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 204


>gi|167039846|ref|YP_001662831.1| glycine betaine/L-proline ABC transporter ATPase
           [Thermoanaerobacter sp. X514]
 gi|300915328|ref|ZP_07132642.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter sp. X561]
 gi|307724830|ref|YP_003904581.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Thermoanaerobacter sp. X513]
 gi|166854086|gb|ABY92495.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter sp. X514]
 gi|300888604|gb|EFK83752.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter sp. X561]
 gi|307581891|gb|ADN55290.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter sp. X513]
          Length = 370

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L  AI I+S      + VV++  +L GI+T  DI            +E++  +N  
Sbjct: 263 PSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDIR---ANKNTAKRIEEIYTRNVY 319

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  D  +   ++++ Q NI  + VV++     G++ 
Sbjct: 320 TVKPDDSILDVLKIMAQKNIGYVPVVNENNLLQGLIT 356



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D+MI NP   L    L  A++++    +  ++VV+   + +GIV   D+
Sbjct: 250 AKDIMITNPIKALPSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDI 300



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/42 (33%), Positives = 25/42 (59%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             ++  VK    ++D + I+++K  G V VV+E   L+G+IT
Sbjct: 315 TRNVYTVKPDDSILDVLKIMAQKNIGYVPVVNENNLLQGLIT 356


>gi|121998795|ref|YP_001003582.1| CBS domain-containing protein [Halorhodospira halophila SL1]
 gi|121590200|gb|ABM62780.1| CBS domain containing protein [Halorhodospira halophila SL1]
          Length = 144

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 10/124 (8%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           +       V    PL +   +     F  V VVDE  +L G+ T+ D+ + F        
Sbjct: 12  YMTAEPKTVGHDTPLRELQRLFDGHDFNGVPVVDEQGQLLGLATKLDLLKAFTFTPDAMV 71

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                +    V +VM + P  +  D  LT  +Q +         VVDD  + +G++   D
Sbjct: 72  PRYDAIMERPVHEVMTREPITVAPDLPLTRVLQRMVDMRTKGFPVVDDSSRVVGVIARED 131

Query: 335 LLRF 338
           LL  
Sbjct: 132 LLGA 135



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 30/60 (50%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  +  V D M   PK +  DT L    +L   H+ + + VVD+  + +G+   LDLL+ 
Sbjct: 3   DFLSYRVSDYMTAEPKTVGHDTPLRELQRLFDGHDFNGVPVVDEQGQLLGLATKLDLLKA 62



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/60 (16%), Positives = 19/60 (31%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +              V    PL   +  + + R     VVD+  ++ G+I   D+    
Sbjct: 77  IMERPVHEVMTREPITVAPDLPLTRVLQRMVDMRTKGFPVVDDSSRVVGVIAREDLLGAL 136


>gi|88797305|ref|ZP_01112895.1| CBS domain protein [Reinekea sp. MED297]
 gi|88780174|gb|EAR11359.1| CBS domain protein [Reinekea sp. MED297]
          Length = 620

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 6/134 (4%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P           S ++ +      V+    + +A  I+ E +  C+ +V E +KL+GI
Sbjct: 143 SRPASFEVQHSQPVSSLIQNRLVYCSVQN--SIREAAEIMRENKVSCLLLV-EQKKLQGI 199

Query: 267 ITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+      D   +   + D+    P+ I     +  A   +    I  L ++    
Sbjct: 200 VTDRDLRNRVVADALDVNRPITDIATLQPQTISYTASVIDAQMQMSNQGIHHLPIM-KDG 258

Query: 325 KAIGIVHFLDLLRF 338
           + IG+V   D++R 
Sbjct: 259 QPIGVVTATDIVRA 272


>gi|304395919|ref|ZP_07377801.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
 gi|304356288|gb|EFM20653.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
          Length = 285

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 73/173 (42%), Gaps = 6/173 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S+ Q   +      + +    S L      +F+ A + I   +  + +  +G S  +  
Sbjct: 94  DSSEQLLAKVFRTSIQAIEETLSILD---VSEFNRAADIIFKAR-HIDLYAVGGSAAVAR 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L+  +   G  S     A        +++ DD++I +S SG++  +   +  A +    
Sbjct: 150 DLSHKMLKIGIKSTAYDDAHIMLMSAAVLSDDDVVIAISHSGATRAVNDPVKLAGKNGAK 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +IAIT+  +S +A  A +VL    +        A   S I QL I DAL +A+
Sbjct: 210 VIAITNYAESPIAQSAHVVLNSTSQGSHLLGENA--ASRIAQLNILDALFVAI 260


>gi|302869479|ref|YP_003838116.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315504058|ref|YP_004082945.1| transcriptional regulator, rpir family [Micromonospora sp. L5]
 gi|302572338|gb|ADL48540.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315410677|gb|ADU08794.1| transcriptional regulator, RpiR family [Micromonospora sp. L5]
          Length = 304

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 6/162 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      L   +       VE I A  GR+ + G G SG + S     L   G  +F
Sbjct: 121 ARAVEETAEQLDPAVC---ERVVEAIGAA-GRIDVYGAGASGFVASDFQQKLHRIGRIAF 176

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +      +     ++ R D+ + +S +G++ ++  +L  AR      +A+T+  +S +  
Sbjct: 177 YFPDVHTALTSAALLGRGDVAVGISHTGTTSDVIEVLEQARARGATTVALTNFPRSPITE 236

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD VLT      +   G   T S + QL + D L + +   
Sbjct: 237 VADHVLTTAARETTYRSGA--TASRLAQLTVVDCLFVGVAAR 276


>gi|229580856|ref|YP_002839255.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228011572|gb|ACP47333.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
          Length = 250

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT              +  V     +   + I+     G + VVD    + GI TE ++ 
Sbjct: 60  GTNIYDLKVKDLMSKDLITVWPNDDVNHVVRIMLMNNIGGIPVVD-NNAIVGIFTEREVL 118

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     + +  V+ VM  N   I E++ +  A +L+  +N+  L V     K IGI+   
Sbjct: 119 KLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAA 178

Query: 334 DLLRF 338
           D++++
Sbjct: 179 DIVKY 183



 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +             ++  +     +++A  +++      + V  +  KL
Sbjct: 112 FTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKL 171

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT  DI +   K+ N   V D   KNP  I     +  A +L+ +  I  L V+ + 
Sbjct: 172 IGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVM-EN 230

Query: 324 QKAIGIVHFLDLL 336
           QK +GIV   DL+
Sbjct: 231 QKLVGIVTERDLM 243



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 58/116 (50%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
           +   +  V     L +AI ILS    G + VV + +K  G+++  D+  +F +   ++  
Sbjct: 7   ANPIVITVFPESSLKEAIDILSNNPTGRI-VVLKEEKPIGMVSTRDVVASFSEYGTNIYD 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V+D+M K+   +  +  +   ++++  +NI  + VVD+    +GI    ++L+ 
Sbjct: 66  LKVKDLMSKDLITVWPNDDVNHVVRIMLMNNIGGIPVVDN-NAIVGIFTEREVLKL 120



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +++A  ++ EKR G + V+ E QKL GI+TE D+   +
Sbjct: 209 SILNAAKLMIEKRIGTLPVM-ENQKLVGIVTERDLMYAY 246


>gi|317407797|gb|EFV87724.1| hypothetical protein HMPREF0005_03245 [Achromobacter xylosoxidans
           C54]
          Length = 146

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
            +  ++  V     + DAI  ++E+  G V VV +G ++ G++TE D  R      +   
Sbjct: 11  KANPAVVTVSPDSSVYDAIKTMAERSIGAV-VVAQGDEVLGMLTERDYARKIVLQDRSSR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V ++M  +   +  +      M L+ + +   L V+   QK +G+V   DL++
Sbjct: 70  TTKVREIMTDSVFYVRPEDTREHCMALMTERHFRHLPVI-QDQKLVGLVSIGDLVK 124


>gi|295402384|ref|ZP_06812338.1| 6-phospho 3-hexuloisomerase [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|294975547|gb|EFG51171.1| 6-phospho 3-hexuloisomerase [Geobacillus thermoglucosidasius
           C56-YS93]
          Length = 187

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L  +       +    V  I   K ++ + G G+SG +    A  +   G  ++ V 
Sbjct: 13  LQELNRTTDFIADEEAEKLVNGILQAK-KIFVAGAGRSGFMSKSFAMRMMHMGLDAYVVG 71

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                +     + +DD++I+ S SG +  L ++   A+     +  +T    S +   AD
Sbjct: 72  ETITPN-----LEQDDILIIGSGSGETRSLVSMAEKAKSLGATIALVTIFPASTIGKLAD 126

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           I + LP  P+         + P  S   Q      DA+ +  +E +    N  +  H
Sbjct: 127 ITVKLPGSPKDQADNGYKTIQPMGSLFEQTLLLFYDAVILRCMEKKGLDSNTMFKRH 183


>gi|238621002|ref|YP_002915828.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|238382072|gb|ACR43160.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
          Length = 250

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT              +  V     +   + I+     G + VVD    + GI TE ++ 
Sbjct: 60  GTNIYDLKVKDIMSKDLITVSPNDDVNHVVRIMLMNNIGGIPVVD-NNAIVGIFTEREVL 118

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     + +  V+ VM  N   I E++ +  A +L+  +N+  L V     K IGI+   
Sbjct: 119 KLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAA 178

Query: 334 DLLRF 338
           D++++
Sbjct: 179 DIVKY 183



 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +             ++  +     +++A  +++      + V  +  KL
Sbjct: 112 FTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKL 171

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT  DI +   K+ N   V D   KNP  I     +  A +L+ +  I  L V+ + 
Sbjct: 172 IGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVM-EN 230

Query: 324 QKAIGIVHFLDLL 336
           QK +GIV   DL+
Sbjct: 231 QKLVGIVTERDLM 243



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +++A  ++ EKR G + V+ E QKL GI+TE D+   +
Sbjct: 209 SILNAAKLMIEKRIGTLPVM-ENQKLVGIVTERDLMYAY 246


>gi|229195158|ref|ZP_04321933.1| Transcriptional regulator, RpiR [Bacillus cereus m1293]
 gi|228588387|gb|EEK46430.1| Transcriptional regulator, RpiR [Bacillus cereus m1293]
          Length = 287

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+S+      +   A + I     +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEASVTAIDKKELEKAADHIVNAD-KIIFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  +   D+ + +S SG + ++  +  YA+R    +IAIT  +  S +   AD
Sbjct: 168 FHMMLPLVTNLKEGDIFVAISTSGRTKDVLEMAQYAKRQDATVIAITKLDQSSPLYKEAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL + DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNMIDALYVITFNRIG 266


>gi|260589060|ref|ZP_05854973.1| inosine-5'-monophosphate dehydrogenase [Blautia hansenii DSM 20583]
 gi|331082490|ref|ZP_08331615.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260540480|gb|EEX21049.1| inosine-5'-monophosphate dehydrogenase [Blautia hansenii DSM 20583]
 gi|330400468|gb|EGG80098.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 484

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMTIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSQEHTLADANDLMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFSR-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   L  A ++L +     L +VD+     G++   D+
Sbjct: 152 MTSENLVTAREGVTLEEAKKILAKSRKEKLPIVDENFNLKGLITIKDI 199


>gi|332162628|ref|YP_004299205.1| inosine 5'-monophosphate dehydrogenase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318606730|emb|CBY28228.1| inosine-5'-monophosphate dehydrogenase [Yersinia enterocolitica
           subsp. palearctica Y11]
 gi|325666858|gb|ADZ43502.1| inosine 5'-monophosphate dehydrogenase [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
          Length = 487

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 204


>gi|302783404|ref|XP_002973475.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
 gi|300159228|gb|EFJ25849.1| hypothetical protein SELMODRAFT_149040 [Selaginella moellendorffii]
          Length = 545

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           +  G  + DA   +  +R     + D    L GIIT+ D+  R   ++L  +   V  VM
Sbjct: 54  IPDGTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVM 113

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  ++ D L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 114 TKNPVFVMSDALAVDALQKMVQGKFRHLPVVENGE----VIALLDITK 157



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
               S +++    +  V     ++ A   + E R   V +     K +GI+T  D + R 
Sbjct: 207 RPTLSTLINENTKVATVSPSDTVLTATRKMREFRVNSVIITI-NNKPQGILTSKDVLMRV 265

Query: 276 FHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
              +L  ++ +V+ VM  NP+ +  +T +  A+  +       L VVD     +
Sbjct: 266 VASNLAPDSTTVDKVMTPNPECVTLETTIVDALHTMHDGKFLHLPVVDQENCIV 319


>gi|225390463|ref|ZP_03760187.1| hypothetical protein CLOSTASPAR_04217 [Clostridium asparagiforme
           DSM 15981]
 gi|225043474|gb|EEG53720.1| hypothetical protein CLOSTASPAR_04217 [Clostridium asparagiforme
           DSM 15981]
          Length = 282

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 63/148 (42%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
                 VEKI   + R+V+ G+G SG I   L   L   G  +   +     +     + 
Sbjct: 119 ASVKAVVEKIAGAR-RIVVAGVGASGFIAQDLYHKLIKLGLNAVCANDPHIMNILATGLD 177

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++ ++I+ S SG S E+  +   A+     + A+TS  KS +A  A  +L          
Sbjct: 178 QNTILILFSHSGESREVLDMAAIAKERRCQVCAVTSYAKSTLANQAGYLLCSS--SRETM 235

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
                 TS I+Q+ I D L ++L+ +  
Sbjct: 236 FRSDAMTSRIVQMVIIDILYVSLVIALG 263


>gi|123441426|ref|YP_001005413.1| inosine 5'-monophosphate dehydrogenase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122088387|emb|CAL11178.1| inosine-5'-monophosphate dehydrogenase [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 487

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 155 PKERLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 204


>gi|171186006|ref|YP_001794925.1| signal transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170935218|gb|ACB40479.1| putative signal transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 286

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 53/104 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    +   + +  EKR+  + VV+E +K  G++    +    +     + V+D+M+  P
Sbjct: 174 KPDDSIEPYVKLFIEKRYRGIPVVNEERKPIGLLMASKLMEALYGCRKDVKVKDLMVGEP 233

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VI E+  +  A++++    I  L+VV+   K +GIV   D+LR
Sbjct: 234 PVIHEEEDIHEAIRIMVSGGIGRLLVVNSEDKLVGIVTRTDILR 277



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                          P++     + +AI I+     G + VV+   KL GI+T  DI R 
Sbjct: 219 CRKDVKVKDLMVGEPPVIHEEEDIHEAIRIMVSGGIGRLLVVNSEDKLVGIVTRTDILRR 278

Query: 276 FH 277
             
Sbjct: 279 IA 280



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +   SV+++M  NP     D  +   ++L  +     + VV++ +K IG++
Sbjct: 157 IPRTSVKNIMTPNPVAAKPDDSIEPYVKLFIEKRYRGIPVVNEERKPIGLL 207


>gi|153005988|ref|YP_001380313.1| inosine 5-monophosphate dehydrogenase [Anaeromyxobacter sp.
           Fw109-5]
 gi|152029561|gb|ABS27329.1| IMP dehydrogenase family protein [Anaeromyxobacter sp. Fw109-5]
          Length = 478

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 36/184 (19%), Positives = 63/184 (34%), Gaps = 10/184 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRNFSENDFYVLHPGGKLGTLF 217
           L +   P     G  P  SA M    G  +A  +A L        D  +      +  + 
Sbjct: 32  LDVNLRPVDFAGGAHPIVSANMNAVTGKRMAETVARLGGLGVLPQDMDLETAARIIAQIK 91

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                          V     L D + I+ ++    V VVD+ ++  GI+T  D+     
Sbjct: 92  SADPRYDTPLS----VSPRATLRDVLGIIHKRAHDMVVVVDDERRPVGIVTHADLR---D 144

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  +  V   M      +   T    A   +  H +    VVD   + +G++   D +R
Sbjct: 145 RDQYS-PVGSFMSSRLVTVPVGTPNRDAFLRMDDHRVKAAPVVDAAGRLVGVLTRDDAVR 203

Query: 338 FGII 341
             ++
Sbjct: 204 LELV 207


>gi|55379702|ref|YP_137552.1| MaoC family protein [Haloarcula marismortui ATCC 43049]
 gi|55232427|gb|AAV47846.1| MaoC family protein [Haloarcula marismortui ATCC 43049]
          Length = 297

 Score = 82.6 bits (203), Expect = 8e-14,   Method: Composition-based stats.
 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTL 283
               +  +    P+I+A   L ++  G + VV++     GIITE DI        D   L
Sbjct: 11  MRTPVKTISPSAPVIEAAQRLRDEDIGSL-VVEDDGSCVGIITESDIVAVTAAEGDTRAL 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           SV DVM +    +  D  +  A+  L+ +NI  L VV +    +GIV   DL
Sbjct: 70  SVGDVMAETLVTVAPDADMQAAVDRLQTNNIKKLPVV-EDGSLVGIVTTTDL 120



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V ++M    K I     +  A Q LR  +I  L VV+D    +GI+   D++
Sbjct: 5   LPVREIMRTPVKTISPSAPVIEAAQRLRDEDIGSL-VVEDDGSCVGIITESDIV 57


>gi|294010055|ref|YP_003543515.1| CBS domain protein [Sphingobium japonicum UT26S]
 gi|292673385|dbj|BAI94903.1| CBS domain protein [Sphingobium japonicum UT26S]
          Length = 142

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +  V+    ++  + +L+++R GCV VVD+  ++ GI +E D+     ++   
Sbjct: 7   LQRKGQDVVQVQSSDTVLSVVRLLAQRRIGCVPVVDD-GEVVGIFSERDLAYRVAQEGAA 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    V ++M        + T +   + L+ +  I  L VV      +G+V   DL++F 
Sbjct: 66  VLDRPVGEIMTAPAITTDDRTPVNHCLSLMTKRRIRHLPVV-VDGALVGLVSIGDLVKFR 124

Query: 340 I 340
           I
Sbjct: 125 I 125


>gi|311743920|ref|ZP_07717726.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
 gi|311313050|gb|EFQ82961.1| cystathionine beta-synthase [Aeromicrobium marinum DSM 15272]
          Length = 142

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 3/124 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           + V         D +  +     + + + +L+E   G + V  +G +L GI++E D+ R 
Sbjct: 1   MRVRDIMTTKGSDVVHTISPEASVRELLDLLAEHDIGALVVSTDGDRLAGIVSERDVVRK 60

Query: 276 FH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D N  +V  +M         D      M ++ Q  +  + VVDD    +GI+   
Sbjct: 61  LRGVPDPNAATVATIMTAEVITCGPDDSAGSLMAIMTQRRVRHVPVVDD-GHLVGILSVG 119

Query: 334 DLLR 337
           D ++
Sbjct: 120 DAVK 123


>gi|297720703|ref|NP_001172713.1| Os01g0923300 [Oryza sativa Japonica Group]
 gi|255674011|dbj|BAH91443.1| Os01g0923300 [Oryza sativa Japonica Group]
          Length = 238

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     + +A   ++ +R   V + D    L GI+T+ DI  R   ++L      V  VM
Sbjct: 73  IPDHTTVYEACRRMAARRVDAVLLTDSNALLCGILTDKDITTRVIARELKLEETPVSKVM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +L DTL   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPLFVLSDTLAVEALQKMVQGKFRHLPVVENGE----VIALLDIAK 176


>gi|237748641|ref|ZP_04579121.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           OXCC13]
 gi|229380003|gb|EEO30094.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           OXCC13]
          Length = 487

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M      +LAIA+            ++H            + V         
Sbjct: 40  NIPLLSAAMDTVTEASLAIAMARQGGIG-----IIHKNMTAAEQAREVAKVKRFEAGMVT 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D I +  +  F    VVD G+K+ GIIT  D+   F ++L    V  +
Sbjct: 95  DPITIPPTMKVRDVIALTRQHGFSGFPVVD-GKKIVGIITNRDLR--FEEEL-DAPVSKI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E T L  A +++ ++ +  ++VV+D  +  G++   D+L+ 
Sbjct: 151 MTPREKLVYVKEGTTLEEAKRVMNRNRLERVLVVNDAFELRGLMTVKDILKK 202


>gi|289548504|ref|YP_003473492.1| diguanylate cyclase with PAS/PAC, CBS and GAF sensors [Thermocrinis
           albus DSM 14484]
 gi|289182121|gb|ADC89365.1| diguanylate cyclase with PAS/PAC, CBS and GAF sensors [Thermocrinis
           albus DSM 14484]
          Length = 822

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVM 289
           P++   C L +A  ++ EK  G V V++E  ++ G++TE DI R   ++++         
Sbjct: 15  PVISADCTLREATEVMREKGRGFV-VLEENGRVVGLLTERDIVRLVAENVSLEEKALTYA 73

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + ED  +  A+ L+ ++NI  L+VVD   +  G V   +LLR+
Sbjct: 74  TTHIMQVREDRDVLYALSLMLENNIRRLVVVDGSGRRRGCVTMQELLRY 122



 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 53/104 (50%), Gaps = 2/104 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    L DA+ ++ EK  G + V+ EG ++ GIITE        + L    ++++ +   
Sbjct: 146 EATATLRDAVKLMKEKDIGALPVL-EGGRILGIITERQCLSFALEGLLDSPLKNLPLLPV 204

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V+ ++  L  A++++   N + L+V+       G++ + D+++
Sbjct: 205 HVVDDEAYLDEALKIMETTNTTHLVVL-KEGIPAGVLSYRDVVK 247



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 55/113 (48%), Gaps = 3/113 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             + ++   I  V+    ++ A++++ E     + VVD   + +G +T  ++ R   +DL
Sbjct: 68  KALTYATTHIMQVREDRDVLYALSLMLENNIRRLVVVDGSGRRRGCVTMQELLRYVEEDL 127

Query: 281 --NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               + V +V+ +    +     L  A++L+++ +I  L V+ +  + +GI+ 
Sbjct: 128 LRRRIKVREVVGREFLFLEATATLRDAVKLMKEKDIGALPVL-EGGRILGIIT 179


>gi|71278503|ref|YP_270892.1| inosine 5'-monophosphate dehydrogenase [Colwellia psychrerythraea
           34H]
 gi|71144243|gb|AAZ24716.1| inosine-5'-monophosphate dehydrogenase [Colwellia psychrerythraea
           34H]
          Length = 490

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI L +     F   +  +      +  +    S ++      
Sbjct: 41  NVPLVSASMDTVTESRLAIKLAQEGGLGFIHKNMTIAEQAKHVCKVKKYESGIV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     +   +    +  F    VVD+   L GIIT  D+   F  DL T SV  +M 
Sbjct: 98  VTVSTDFTIEQVMHKADDLGFSGFPVVDDKNNLVGIITGRDLR--FETDL-TKSVSSLMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +    + E       + L+  + I  ++VVDD  K +G++   D  + 
Sbjct: 155 VKEKLITVKEGAAREEILGLMHTNRIEKILVVDDAFKLVGLITAKDYQKA 204


>gi|85706431|ref|ZP_01037525.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseovarius sp. 217]
 gi|85669204|gb|EAQ24071.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseovarius sp. 217]
          Length = 612

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 50/141 (35%), Gaps = 9/141 (6%)

Query: 204 FYVLHPG-----GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F    P      G   T             +         + +   ++ +     V VV 
Sbjct: 126 FARARPSTSGDDGPYATGLTALQVSDLMTATPITCSPDATIKEVARLMRDHVISSV-VVM 184

Query: 259 EGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           EG +L GIIT  D+  +   + L   + V  VM  +P  I    L   A+ LL    I+ 
Sbjct: 185 EGARLAGIITVRDLSNKVLAEGLGGDIRVAQVMTPDPVTIEPGRLGLDALMLLSDLKINH 244

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V     + +G++   DL R
Sbjct: 245 LPVA-QGGRVLGMIGKTDLFR 264


>gi|84386995|ref|ZP_00990018.1| hypothetical protein V12B01_24299 [Vibrio splendidus 12B01]
 gi|84378070|gb|EAP94930.1| hypothetical protein V12B01_24299 [Vibrio splendidus 12B01]
          Length = 620

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VE 286
            + +VK    +      +  +R    AV+ EG+ + G+IT+ D+  R     ++T S + 
Sbjct: 165 QVAIVKSEQTIQSVAVEMLHQR-SPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLIS 223

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +P  +  D L+  A  ++ Q NI  L VV    K +G++    L++
Sbjct: 224 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVV-KENKVVGLLTTSHLVQ 273


>gi|325959691|ref|YP_004291157.1| hypothetical protein Metbo_1965 [Methanobacterium sp. AL-21]
 gi|325331123|gb|ADZ10185.1| protein of unknown function DUF39 [Methanobacterium sp. AL-21]
          Length = 514

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + D    L +     + VVD+ QKL GI+T  DI     K      ++DVM K  
Sbjct: 402 NPDDEIGDVAKRLVQNNINHLPVVDDDQKLLGIVTSWDIANAVAKG--KTKLKDVMTKKV 459

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  ED  + +  + + +H IS L ++D      G++   D+ R 
Sbjct: 460 VIAREDEPVDIIARRIDKHEISGLPIIDKNNHVKGMITAEDISRL 504



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 T  V ++  K       D  +    + L Q+NI+ L VVDD QK +GIV   D+
Sbjct: 381 LEIRRQTPIVNELQSKPLITANPDDEIGDVAKRLVQNNINHLPVVDDDQKLLGIVTSWDI 440

Query: 336 LRF 338
              
Sbjct: 441 ANA 443


>gi|255767340|ref|NP_389378.2| oxidoreductase [Bacillus subtilis subsp. subtilis str. 168]
 gi|296331070|ref|ZP_06873544.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305674225|ref|YP_003865897.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|321315257|ref|YP_004207544.1| putative oxidoreductase [Bacillus subtilis BSn5]
 gi|264664572|sp|O34682|YLBB_BACSU RecName: Full=Uncharacterized protein ylbB
 gi|225184967|emb|CAB13368.2| putative oxidoreductase [Bacillus subtilis subsp. subtilis str.
           168]
 gi|291484044|dbj|BAI85119.1| hypothetical protein BSNT_02482 [Bacillus subtilis subsp. natto
           BEST195]
 gi|296151714|gb|EFG92589.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305412469|gb|ADM37588.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|320021531|gb|ADV96517.1| putative oxidoreductase [Bacillus subtilis BSn5]
          Length = 148

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + VVDE  + L GI+T+ D+       K  N+  + D M + P  
Sbjct: 21  VYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAMTEKPVS 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ED  +   + L+  H +  + V    +K  GIV   DL
Sbjct: 81  VEEDASVDEVLHLMASHQLRRIPVT-KNKKLTGIVTLGDL 119



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
             ++D+M  + +       +  A   ++  N+  + VVD+  +  +GIV   DL+  GI
Sbjct: 2   TKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGI 60


>gi|224371900|ref|YP_002606066.1| hypothetical protein HRM2_48540 [Desulfobacterium autotrophicum
           HRM2]
 gi|223694619|gb|ACN17902.1| conserved hypothetical protein [Desulfobacterium autotrophicum
           HRM2]
          Length = 197

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 60/166 (36%), Gaps = 25/166 (15%)

Query: 198 NFSENDFYVLHPGG---KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + + +DF  ++       +  +             + +V    PL++  T ++E     +
Sbjct: 30  DITPSDFLQIYQIAFDHAVSRIKTAIKANQIMTRQVIVVGEDAPLVEVATQMAENDISGL 89

Query: 255 AVVDEGQKLKGIITEGDIFRNF----------------------HKDLNTLSVEDVMIKN 292
            VV++ + + G+I+E D  +                              LS  ++M   
Sbjct: 90  PVVNKDRIVVGVISEKDFLKGMNDLKTPSFMRVLLQCLDNSHCIESSFKNLSAAEIMSSP 149

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  +     +      + + NI+ + VVD+  K  GI+   DL++ 
Sbjct: 150 PVTVETTASILDVASTMDRFNINRVPVVDENTKLAGIIARSDLVQA 195



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 24/64 (37%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + + F   S           V+    ++D  + +       V VVDE  KL GII   D+
Sbjct: 133 IESSFKNLSAAEIMSSPPVTVETTASILDVASTMDRFNINRVPVVDENTKLAGIIARSDL 192

Query: 273 FRNF 276
            +  
Sbjct: 193 VQAM 196


>gi|154687061|ref|YP_001422222.1| YtoI [Bacillus amyloliquefaciens FZB42]
 gi|154352912|gb|ABS74991.1| YtoI [Bacillus amyloliquefaciens FZB42]
          Length = 438

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   D    +     L        E   G   V+D+  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPADRTVTLSPKDKLEKWYEKNYETGHGRFPVIDQQMKIHGILTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI         ++ +E VM KNP  ++  T +  A Q++    I VL V D   K IG++
Sbjct: 242 DI----AGHDRSVPIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHHKLIGMI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|86145827|ref|ZP_01064155.1| hypothetical protein MED222_13545 [Vibrio sp. MED222]
 gi|85836282|gb|EAQ54412.1| hypothetical protein MED222_13545 [Vibrio sp. MED222]
          Length = 622

 Score = 82.6 bits (203), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VE 286
            + +VK    +      +  +R    AV+ EG+ + G+IT+ D+  R     ++T S + 
Sbjct: 167 QVAIVKSEQTIQSVAVEMLHQR-SPCAVIYEGETIVGLITDRDMTKRVIAHGVSTDSLIS 225

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +P  +  D L+  A  ++ Q NI  L VV    K +G++    L++
Sbjct: 226 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVV-KENKVVGLLTTSHLVQ 275


>gi|168028557|ref|XP_001766794.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682003|gb|EDQ68425.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 441

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 45/107 (42%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---VEDVM 289
           +  G  + DA   ++ +R     + D    L GIIT+ D+      D        V  VM
Sbjct: 16  IPEGTTVADACRRMATRRVDAALLTDSSALLCGIITDKDVATRVIADGLKPEETLVSKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +NP  ++ DTL   A+Q + Q     L VV +  + + ++     L
Sbjct: 76  TRNPIFVMGDTLAVEALQKMVQGKFRHLPVV-EGGEVVALLDITKCL 121



 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 45/266 (16%), Positives = 83/266 (31%), Gaps = 16/266 (6%)

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G   +     +A+    +  +  + A     G+IT  D+   +   G   E   +     
Sbjct: 19  GTTVADACRRMATRRVDAALLTDSSALL--CGIITDKDVATRVIADGLKPEETLVSKVMT 76

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESC-----------PHGLAPTTSAIMQLA 184
           R  I ++  T   +++          LP                    +A    A  +  
Sbjct: 77  RNPIFVMGDTLAVEALQKMVQGKFRHLPVVEGGEVVALLDITKCLYDAIARMERAAEKGN 136

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
              A   ++    +   +D        +          ++  G  +P       + DA  
Sbjct: 137 AIAAAVESVEREWSVKGSDKSSFIENLRDRMFRPTLGSIITEGTKVPTCSPSETVTDATK 196

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
            + E+R   V +     K  GI+T  D + R   KDL     +++ VM  NP+    DT 
Sbjct: 197 KMKEQRMNSVVITSSSNKPIGILTSKDVLMRVVAKDLQPEKTTLDKVMTPNPECASLDTT 256

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAI 327
           L  A+  +       L V D     +
Sbjct: 257 LVDALHTMHDGKFLHLPVKDRDGLLV 282



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 20/42 (47%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  +T A + +++  ++ +++     K IGI+   D+L
Sbjct: 184 TCSPSETVTDATKKMKEQRMNSVVITSSSNKPIGILTSKDVL 225


>gi|261855672|ref|YP_003262955.1| hypothetical protein Hneap_1072 [Halothiobacillus neapolitanus c2]
 gi|261836141|gb|ACX95908.1| CBS domain containing protein [Halothiobacillus neapolitanus c2]
          Length = 221

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
              P+ +   +++ ++ G V ++D  +KL GI+T+GD+ R   +  DL    V  +   N
Sbjct: 105 PDAPISEFRALITRRKIGLVPLIDAQKKLVGIVTKGDLTRQRVRFTDLAPRPVSTIGTPN 164

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +T +    ++L   +I  L +V+D    +G+V   D+LR 
Sbjct: 165 VLTATTNTNIRELARVLLARDIRGLPIVNDIGDVVGVVTRGDILRA 210



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            E +M      ++ D  ++    L+ +  I ++ ++D  +K +GIV   DL R  +
Sbjct: 92  AEQIMTSPVLSLMPDAPISEFRALITRRKIGLVPLIDAQKKLVGIVTKGDLTRQRV 147


>gi|327438655|dbj|BAK15020.1| transcriptional regulator [Solibacillus silvestris StLB046]
          Length = 281

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 68/178 (38%), Gaps = 5/178 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
                 L K+ST+   +++I  E   + +++ +L      +    + +I   + +++  G
Sbjct: 81  NNHNFELEKDSTILQMIQTI--EMHNIDAIQRTLMINGERELEKIIHQINNAR-KIIFIG 137

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           IG S  +       L         +  +          T +D++  +S+SG + E+   L
Sbjct: 138 IGASAIVAQDFEHKLKRINKNCETIFDSHGQLIAAAHATSEDVVFAISYSGETKEVINAL 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A+     +I +T   ++ +   AD  L             + T S I QL + D L
Sbjct: 198 TVAKENQATIITMTQNKRNTIQSFADSAL--YVVSNEADIRSSATASRIAQLTLIDIL 253


>gi|154150926|ref|YP_001404544.1| signal transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|153999478|gb|ABS55901.1| putative signal transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 282

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 222 DVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            ++    +  +V +  P    D + IL       V V+ + +KL GIIT  D+ R   + 
Sbjct: 1   MLVKDYMTSDVVHVDIPGNRDDVLKILKRTGISGVPVL-KNKKLVGIITRKDLLRKPEET 59

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L    +M   P  I  D  +  A +LL  H I  L VV +  K IG++   DL+  
Sbjct: 60  QLGL----LMTSKPITIGPDADIREAARLLVSHRIRRLPVV-EDNKLIGLISVADLIHA 113



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     + +A  +L   R   + VV E  KL G+I+  D+     +      +
Sbjct: 65  MTSKPITIGPDADIREAARLLVSHRIRRLPVV-EDNKLIGLISVADLIHAIAQMKIKDEI 123

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D+       + EDT L +  +++    +  + +++      GI+   DL+R
Sbjct: 124 KDLYTSTTFALWEDTPLPLVGRVMEISGVDAIPILNSDSVLQGIISERDLIR 175



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 20/141 (14%), Positives = 49/141 (34%), Gaps = 36/141 (25%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------- 279
               PL     ++       + +++    L+GII+E D+ R+   +              
Sbjct: 135 WEDTPLPLVGRVMEISGVDAIPILNSDSVLQGIISERDLIRHSSIEDSVGVSDFSNGTDD 194

Query: 280 ----------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                 L    V+  M+KN   + +++ ++     +R+  +  L
Sbjct: 195 DEWTWESIRDNHSISFGISRVQLPNRPVKLAMVKNVVAVPKNSEVSECALKMRRSRVDQL 254

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            VV+  ++   ++   +L+R 
Sbjct: 255 PVVNGDKRLSAMLFDRELIRA 275


>gi|227828810|ref|YP_002830590.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229586017|ref|YP_002844519.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|227460606|gb|ACP39292.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228021067|gb|ACP56474.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
          Length = 250

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT              +  V     +   + I+     G + VVD    + GI TE ++ 
Sbjct: 60  GTNIYDLKVKDIMSKDLITVSPNDDVNHVVRIMLMNNIGGIPVVD-NNAIVGIFTEREVL 118

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     + +  V+ VM  N   I E++ +  A +L+  +N+  L V     K IGI+   
Sbjct: 119 KLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAA 178

Query: 334 DLLRF 338
           D++++
Sbjct: 179 DIVKY 183



 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +             ++  +     +++A  +++      + V  +  KL
Sbjct: 112 FTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKL 171

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT  DI +   K+ N   V D   KNP  I     +  A +L+ +  I  L V+ + 
Sbjct: 172 IGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVM-EN 230

Query: 324 QKAIGIVHFLDLL 336
           QK +GIV   DL+
Sbjct: 231 QKLVGIVTERDLM 243



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +++A  ++ EKR G + V+ E QKL GI+TE D+   +
Sbjct: 209 SILNAAKLMIEKRIGTLPVM-ENQKLVGIVTERDLMYAY 246


>gi|227831543|ref|YP_002833323.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229580496|ref|YP_002838896.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|284999095|ref|YP_003420863.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227457991|gb|ACP36678.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|228011212|gb|ACP46974.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|284446991|gb|ADB88493.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|323475806|gb|ADX86412.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478620|gb|ADX83858.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 250

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT              +  V     +   + I+     G + VVD    + GI TE ++ 
Sbjct: 60  GTNIYDLKVKDIMSKDLITVSPNDDVNHVVRIMLMNNIGGIPVVD-NNAIVGIFTEREVL 118

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     + +  V+ VM  N   I E++ +  A +L+  +N+  L V     K IGI+   
Sbjct: 119 KLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKLIGIITAA 178

Query: 334 DLLRF 338
           D++++
Sbjct: 179 DIVKY 183



 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +             ++  +     +++A  +++      + V  +  KL
Sbjct: 112 FTEREVLKLIASSMFSGLVDSVMSSNVVSIGEESTILEAAKLMAMNNVRRLPVFSKNNKL 171

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT  DI +   K+ N   V D   KNP  I     +  A +L+ +  I  L V+ + 
Sbjct: 172 IGIITAADIVKYLAKNKNIGKVLDAGTKNPITISRYYSILNAAKLMIEKRIGTLPVM-EN 230

Query: 324 QKAIGIVHFLDLL 336
           QK +GIV   DL+
Sbjct: 231 QKLVGIVTERDLM 243



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +++A  ++ EKR G + V+ E QKL GI+TE D+   +
Sbjct: 209 SILNAAKLMIEKRIGTLPVM-ENQKLVGIVTERDLMYAY 246


>gi|119897871|ref|YP_933084.1| IMP dehydrogenase [Azoarcus sp. BH72]
 gi|119670284|emb|CAL94197.1| IMP dehydrogenase [Azoarcus sp. BH72]
          Length = 486

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 66/167 (39%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAIALAQEGGLGIVH-KNLTPKQQAAEVSKVKRFESGVLKDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           +     + + + +  + RF  + V+ EG+K+ GI+T  D+   F  +L+   V  +M   
Sbjct: 99  IPPTMSVREVVALTRQHRFSGLPVL-EGKKVVGIVTNRDLR--FETNLDQ-PVSAIMTPQ 154

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E   L  A  L+ +H +  ++V++D  +  G++   D+++
Sbjct: 155 SRLVTVKEGGSLEDARALMHKHRLERVLVLNDEGELRGLITVKDMMK 201


>gi|110679931|ref|YP_682938.1| inosine-5'-monophosphate dehydrogenase [Roseobacter denitrificans
           OCh 114]
 gi|109456047|gb|ABG32252.1| inosine-5'-monophosphate dehydrogenase [Roseobacter denitrificans
           OCh 114]
          Length = 482

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIGVVHRNLSVEEQAQEVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +    R     VVDE  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPEQTLADAKALQERYRVTGFPVVDEKGRVLGIVTNRDMRFASD---DRTPVSVMMS 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 AENLAILTEPADREEAISLMKSRRIEKLLVTDGEGKLTGLLTLKD 197



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  +  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLRPEQTLADAKALQERYRVTGFPVVDEKGRVLGIVTNRDM 137


>gi|315605965|ref|ZP_07880996.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           180 str. F0310]
 gi|315312247|gb|EFU60333.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           180 str. F0310]
          Length = 506

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 58/171 (33%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            +LH    +         V  S     +
Sbjct: 47  RVPLLSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIEEQAAQVRQVKRSESGMVE 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   +    R   + VV +   L GIIT  D+     ++  TL V D 
Sbjct: 102 DPVTVGPNATIDELDRLCGHYRVSGLPVVSDDGSLLGIITNRDLRFVPQEEWATLRVRDC 161

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M       V         A  LL +H +  L +VD+  +  G++   D ++
Sbjct: 162 MTPRDRLVVGQVGISREHAKHLLAEHRVEKLPIVDENDRLTGLITVKDFVK 212


>gi|325262846|ref|ZP_08129582.1| inosine-5'-monophosphate dehydrogenase [Clostridium sp. D5]
 gi|324031940|gb|EGB93219.1| inosine-5'-monophosphate dehydrogenase [Clostridium sp. D5]
          Length = 484

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPEHTLEDANNLMAKYRISGVPIT-EGRKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 153 TSEGLITAKEGITLNEAKKILAKARKEKLPIVDDEGNLKGLITIKDI 199


>gi|308174623|ref|YP_003921328.1| hypothetical protein BAMF_2732 [Bacillus amyloliquefaciens DSM 7]
 gi|307607487|emb|CBI43858.1| conserved hypothetical protein [Bacillus amyloliquefaciens DSM 7]
 gi|328554549|gb|AEB25041.1| hypothetical protein BAMTA208_14400 [Bacillus amyloliquefaciens
           TA208]
 gi|328912953|gb|AEB64549.1| hypothetical protein LL3_03018 [Bacillus amyloliquefaciens LL3]
          Length = 438

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   D    +     L        E   G   V+D+  K+ GI+T  
Sbjct: 182 QLIKKEIVLVEDILTPADRTVTLSPKDKLEKWYEKNYETGHGRFPVIDQQMKIHGILTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI         ++ +E VM KNP  ++  T +  A Q++    I VL V D   + IG++
Sbjct: 242 DI----AGHDRSVPIEKVMTKNPVTVIGKTSVASAAQMMVWEGIEVLPVTDGHHRLIGMI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|301648084|ref|ZP_07247847.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|331643050|ref|ZP_08344185.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
 gi|301073807|gb|EFK88613.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|331039848|gb|EGI12068.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H736]
          Length = 352

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 158 SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 214

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 215 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 274

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 275 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 331


>gi|209965041|ref|YP_002297956.1| HTH-type transcriptional regulator hexR, putative [Rhodospirillum
           centenum SW]
 gi|209958507|gb|ACI99143.1| HTH-type transcriptional regulator hexR, putative [Rhodospirillum
           centenum SW]
          Length = 280

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 43/198 (21%), Positives = 73/198 (36%), Gaps = 8/198 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A + +      L+ L + L  +       AV+ +   + R+   G G SG +     +
Sbjct: 91  EIAAKLLNRSIGALTRLRNQLNPD---ALEAAVQVLTETR-RLDCYGFGASGVVALDAQN 146

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
                G P      +        ++    + + +S SG + EL   +  A      +IAI
Sbjct: 147 KFFRLGLPVVAHTDSHVQAMAAALLGPQGVALAVSRSGRTRELLRSVDLALAGGARVIAI 206

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T+   S +A  A + L +    +S P+   P TS I  LA+ D L +A    R     D 
Sbjct: 207 TA-GGSPLAGRATVPLLVDAPEDSSPY--TPMTSRIAHLAVVDILQVATALRRGVHTGD- 262

Query: 205 YVLHPGGKLGTLFVCASD 222
            +  P   L       S 
Sbjct: 263 PLRRPAAALRDDRQLVSA 280


>gi|160881412|ref|YP_001560380.1| inosine-5'-monophosphate dehydrogenase [Clostridium phytofermentans
           ISDg]
 gi|160430078|gb|ABX43641.1| inosine-5'-monophosphate dehydrogenase [Clostridium phytofermentans
           ISDg]
          Length = 484

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    + +       V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----VIHKNMSIESQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFSLSPEHTLQDADELMAKYRISGVPIT-EGKKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L Q     L +VD      G++   D+
Sbjct: 153 TSEGLITAKEGVTLEEAKKILGQARKEKLPIVDKNGNLKGLITIKDI 199


>gi|148656029|ref|YP_001276234.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568139|gb|ABQ90284.1| CBS domain containing protein [Roseiflexus sp. RS-1]
          Length = 133

 Score = 82.3 bits (202), Expect = 9e-14,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                        L +A  ++ + R   + V+D   +L GI+TEGDI R           
Sbjct: 1   MSQPPICAPETMTLPEARRLMHKSRIRRLPVLDSAGRLTGIVTEGDINRISASHAHDVRE 60

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            N +     L + D M +    +  D  +    QLL  H IS + VV +  + +G++   
Sbjct: 61  YNLYHRAADLPLRDFMTRPVITVGPDEPIIAVAQLLLLHRISGVPVV-EGDRVVGVITES 119

Query: 334 DLLR 337
           DL R
Sbjct: 120 DLFR 123


>gi|269218023|ref|ZP_06161877.1| glutamine-fructose-6-phosphate transaminase [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269212958|gb|EEZ79298.1| glutamine-fructose-6-phosphate transaminase [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 375

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 3/144 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
           GE + +F      +     R+V+TG+G S    + LAS L   G  +  +H AE  H  +
Sbjct: 46  GEQTDKFERVRTLLGGR--RLVLTGMGSSADAVTALASVLGRRGVEANTIHTAELLHYRM 103

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRF-SIPLIAITSENKSVVACHADIVLTLPKE 165
             +  D  ++ +S SG S E   +    R+   +PL+A+T+  +S +A  A + + L   
Sbjct: 104 NALAPDSAVVAVSQSGESIEAVRMAAELRKKEGVPLVAVTNGPQSPLAEEAAVSIDLGAG 163

Query: 166 PESCPHGLAPTTSAIMQLAIGDAL 189
            E  P      ++ +    + + L
Sbjct: 164 DERGPSSKTYVSTMLAMHVLAEVL 187


>gi|124514359|gb|EAY55872.1| putative signal-transduction protein with CBS domains
           [Leptospirillum rubarum]
 gi|206602759|gb|EDZ39240.1| Putative signal-transduction protein with CBS domains
           [Leptospirillum sp. Group II '5-way CG']
          Length = 136

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH 277
             S       +  LV     + + + I+  K+ G + V ++G K  GIITE DI  R   
Sbjct: 1   MVSVKKVMTKNPLLVDTTTTVREVVEIMKTKKVGSLLV-NQGDKTVGIITETDIVRRVLG 59

Query: 278 KDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +D      +V  VM      I ED  +  A  ++ +H+I  L+V+ D    +G++   DL
Sbjct: 60  EDRVPYITAVSQVMSAPVLSIQEDASIYDAQDMMDKHHIRHLLVLRDED-VVGLISIRDL 118

Query: 336 L 336
           +
Sbjct: 119 I 119



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           SV+ VM KNP ++   T +   +++++   +  L+V +   K +GI+   D++R
Sbjct: 3   SVKKVMTKNPLLVDTTTTVREVVEIMKTKKVGSLLV-NQGDKTVGIITETDIVR 55


>gi|91775494|ref|YP_545250.1| inosine-5'-monophosphate dehydrogenase [Methylobacillus flagellatus
           KT]
 gi|91709481|gb|ABE49409.1| inosine-5'-monophosphate dehydrogenase [Methylobacillus flagellatus
           KT]
          Length = 486

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 70/169 (41%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +  +      +  +    S V+H     
Sbjct: 40  NIPLISAAMDTVTEAPLAIALAQEGGMGIVHKNMSIKDQAAHVSRVKRFESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + D + +  + +   + VVD G+K+ GI+T  D+   F  +L+   + ++M 
Sbjct: 97  VTIQPNLTVRDVLALTRQHKISGLPVVD-GKKVVGIVTNRDLR--FETNLDQA-ISNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E   L  A  LL +H +  ++VV+D  +  G++   D+ +
Sbjct: 153 PRERLVTVREGASLEEATALLHKHRLERVLVVNDAFELKGLITVKDIQK 201


>gi|295093809|emb|CBK82900.1| inosine-5'-monophosphate dehydrogenase [Coprococcus sp. ART55/1]
          Length = 483

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/168 (23%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----VIHKNMSIEKQAEEVDKVKRSENGVIS 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++S+ R   V +  E  KL GIIT  D+   F KD  T  +++ 
Sbjct: 96  DPFYLSPEHTLADADELMSKFRISGVPIT-EDGKLVGIITNRDLK--FEKD-YTKKIKES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 152 MTSEGLVTAKEGITLDEAREILGKARKEKLPIVDDDFHLKGLITIKDI 199


>gi|154151769|ref|YP_001405387.1| signal transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|154000321|gb|ABS56744.1| putative signal transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 249

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 8/121 (6%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KD 279
                I  V     L      ++E  F    VV + ++L G+I+  D+ R+         
Sbjct: 131 RMSKKIQTVDPADTLQQVYAKITECGFTAFPVV-KKRRLVGLISRRDLIRSGGVRSAIAQ 189

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +T +V DVMI +   +   +LL+ A +L+  ++IS L VVD+    +GI+   D+L  G
Sbjct: 190 NSTRTVGDVMIPDVITVPSGSLLSEAARLMVDNDISRLPVVDNE-SVVGIIDRHDVL-AG 247

Query: 340 I 340
           +
Sbjct: 248 L 248



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 39/106 (36%), Gaps = 2/106 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNP 293
               +  A   +        A+VD  + + G +   D+F     ++  +  V   M K  
Sbjct: 77  PDASVESAAKAMRAHATDSAAIVDASRHILGGVLLSDLFPVIISRNELSGRVSSRMSKKI 136

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + +     L      + +   +   VV   ++ +G++   DL+R G
Sbjct: 137 QTVDPADTLQQVYAKITECGFTAFPVV-KKRRLVGLISRRDLIRSG 181


>gi|86159556|ref|YP_466341.1| inosine 5-monophosphate dehydrogenase [Anaeromyxobacter
           dehalogenans 2CP-C]
 gi|85776067|gb|ABC82904.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 478

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +   P   P G  P  SA M    G  +A  +           D  +         + 
Sbjct: 32  LEVDLRPVDFPGGSHPVVSANMNAVTGKRMAETMARLGGIGVLPQDMSLE----TAARII 87

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+   V     L D   I+ ++    V VVD+ ++  GI+T  D+     
Sbjct: 88  QHIRSADPRHDTPLSVSPRATLRDVQGIIRKRAHDMVVVVDDERRPVGIVTHADLR---D 144

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  +      M      I   T    A   + +  +    VVD   + +G++   D +R
Sbjct: 145 QDQYS-PAASFMSSRLVTIPVGTPNREAFLRMEEQRVKAAPVVDAAGRLVGVLTRDDAVR 203

Query: 338 F 338
            
Sbjct: 204 L 204


>gi|146303271|ref|YP_001190587.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701521|gb|ABP94663.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 258

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 2/124 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +         + +  V +   + D + +L     G V V+D G  + GI TE D+ 
Sbjct: 70  GRKIMELRVKDLMSEKLIKVNVDDNVQDVLRVLIAHDIGGVPVMD-GDVIVGIFTERDLV 128

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   K   +  V+ +M  N   + ++T    A +L+  H +  L ++D   K +GIV   
Sbjct: 129 RLMAKKTYSGLVDSIMSPNVFTVDKETDSLEASKLMSLHKVRRLPIMDGD-KLVGIVTAA 187

Query: 334 DLLR 337
           D+++
Sbjct: 188 DIVK 191



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V      ++A  ++S  +   + ++D G KL GI+T  DI ++  + +   +V ++  K+
Sbjct: 151 VDKETDSLEASKLMSLHKVRRLPIMD-GDKLVGIVTAADIVKSLLRSVEPQNVLEIGSKD 209

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  +     +  A++++ +  I  + VV++  K +GIV   DLL
Sbjct: 210 PITVKRLDTIMKAVRIMEERRIGTIPVVEE--KLVGIVTERDLL 251



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V     + + I +LS  + G V V+ +  K +GI+T   +   +    + +  L V+D+M
Sbjct: 24  VTPESDMRELIEVLSRDKSGRVIVL-KDGKPEGIVTTRTVVNAYAQYGRKIMELRVKDLM 82

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    +  D  +   +++L  H+I  + V+D     +GI    DL+R 
Sbjct: 83  SEKLIKVNVDDNVQDVLRVLIAHDIGGVPVMDGD-VIVGIFTERDLVRL 130


>gi|170767360|ref|ZP_02901813.1| transcriptional regulator, RpiR family [Escherichia albertii
           TW07627]
 gi|170123694|gb|EDS92625.1| transcriptional regulator, RpiR family [Escherichia albertii
           TW07627]
          Length = 282

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 104 KENTAAMYATLNVNSEEKLHDCVAMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 163 AERDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 223 RASHCLYTIAEEQAT--NSASISACHAQGLLTDLLFIALIQQ 262


>gi|154685383|ref|YP_001420544.1| YhcV [Bacillus amyloliquefaciens FZB42]
 gi|154351234|gb|ABS73313.1| YhcV [Bacillus amyloliquefaciens FZB42]
          Length = 140

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  V     + +A  ++ +   G + VVD G +LKG++T+ D  +           
Sbjct: 8   MTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDIALRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  VM         +  L  A  L+ QH I  L +VD     +GIV   DL
Sbjct: 67  PVSHVMSSAVVSGNPEMSLEEASHLMAQHQIRRLPIVD-QNHLVGIVALGDL 117



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S++  M  +   +  +  +  A  L+ QHN+  + VVD   +  G++   D+
Sbjct: 3   SIKQSMTTHVATVSPNQTIQEAAALMHQHNVGAIPVVD-GGELKGMLTDRDI 53


>gi|126179145|ref|YP_001047110.1| signal-transduction protein [Methanoculleus marisnigri JR1]
 gi|125861939|gb|ABN57128.1| putative signal-transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 280

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/98 (30%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D + IL       V V+ +  +L GIIT  D+ R   +    L    +M  +P VI  D 
Sbjct: 16  DVLRILKRTGISGVPVL-KDGELVGIITRKDLLRKAEETQLGL----LMTPDPVVIRPDA 70

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++ A QL+ +HNI  L V+    K +G++   DL+  
Sbjct: 71  PISEAAQLMVRHNIRRLPVL-QDGKMVGLISVADLIGA 107



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 49/112 (43%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +++   P+ +A  ++       + V+ +  K+ G+I+  D+     +   TL +
Sbjct: 59  MTPDPVVIRPDAPISEAAQLMVRHNIRRLPVL-QDGKMVGLISVADLIGAVAQLRITLPI 117

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +     + E+T L++  ++L       + V+ +     GI+   DL+R
Sbjct: 118 KENYVSKTYALWEETPLSLVGRVLEISGYDAIPVLMEDGTLTGIISERDLIR 169



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 24/156 (15%), Positives = 54/156 (34%), Gaps = 36/156 (23%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G +  L +      +       +    PL     +L    +  + V+ E   L GII+E 
Sbjct: 106 GAVAQLRITLPIKENYVSKTYALWEETPLSLVGRVLEISGYDAIPVLMEDGTLTGIISER 165

Query: 271 DIFRNFH------------------------KDLNTL------------SVEDVMIKNPK 294
           D+ R+                          +D++T+             V++ M+KN  
Sbjct: 166 DLIRHSRIEDGVEVSDFSNGTDDDEWTWESIRDMHTISYGISKIQLLPIPVKNAMVKNVL 225

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +  +  +      +R+  +  L VV+  ++ + ++
Sbjct: 226 AVPLNAEVGECALKMRRARVDQLPVVNGNKRLVAML 261


>gi|317050856|ref|YP_004111972.1| hypothetical protein Selin_0671 [Desulfurispirillum indicum S5]
 gi|316945940|gb|ADU65416.1| protein of unknown function DUF294 nucleotidyltransferase
           [Desulfurispirillum indicum S5]
          Length = 626

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 10/134 (7%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-------LKGI 266
               + A  +        ++ +      A   +SE+    + +V++  +       + GI
Sbjct: 144 ANELMTAKVLTLVQRDPVVIGVQATAQQACQKMSEESVSSLLIVNDTAENRENTSPMAGI 203

Query: 267 ITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           IT+ DI  R     L+ +  V  +M      +  + L+  AM L+ +HN+  L V+    
Sbjct: 204 ITDRDIRNRLVTPGLDYSTPVAQIMSTELVTVEHNQLVFEAMLLMLRHNVHHLPVL-KNH 262

Query: 325 KAIGIVHFLDLLRF 338
           + IG+V   D++R+
Sbjct: 263 RPIGVVAISDIIRY 276



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQK----- 325
            R    +L T  V  ++ ++P VI        A Q + + ++S L++V+D    +     
Sbjct: 140 RREDANELMTAKVLTLVQRDPVVIGVQATAQQACQKMSEESVSSLLIVNDTAENRENTSP 199

Query: 326 AIGIVHFLDL 335
             GI+   D+
Sbjct: 200 MAGIITDRDI 209


>gi|317129959|ref|YP_004096241.1| CBS domain containing membrane protein [Bacillus cellulosilyticus
           DSM 2522]
 gi|315474907|gb|ADU31510.1| CBS domain containing membrane protein [Bacillus cellulosilyticus
           DSM 2522]
          Length = 212

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 8/108 (7%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSV-----EDV 288
              + +A+ ++   +   + ++D+  ++ GII++ D+        D N +++      D+
Sbjct: 17  ETTIQEALNLMEVNKIRHLPILDKTAQIAGIISDRDLRDACPSIFDDNNITIYERPLLDI 76

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M KN         +  A  ++ ++ IS L V +D  K IGI+   DLL
Sbjct: 77  MTKNVLTAFSYDFIEEAANMMTENQISCLPV-EDDGKLIGIITEKDLL 123



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D+M+ +      +T +  A+ L+  + I  L ++D   +  GI+   DL
Sbjct: 1   MKVKDIMVTSVITATTETTIQEALNLMEVNKIRHLPILDKTAQIAGIISDRDL 53



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 13/82 (15%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVE-DVMIKNP 293
           + +A  +++E +  C+ V D+  KL GIITE D+   F K    D+ T  +E +V  K+ 
Sbjct: 90  IEEAANMMTENQISCLPVEDD-GKLIGIITEKDLLNTFVKLTGVDVPTSRLELEVANKSG 148

Query: 294 KVILEDTLLTVAMQLLRQHNIS 315
                  +L+    ++++HNI+
Sbjct: 149 -------MLSEVASVIKEHNIN 163


>gi|94676669|ref|YP_589074.1| inosine-5'-monophosphate dehydrogenase [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
 gi|94219819|gb|ABF13978.1| inosine-5'-monophosphate dehydrogenase [Baumannia cicadellinicola
           str. Hc (Homalodisca coagulata)]
          Length = 485

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 58/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +           +H    +         V         
Sbjct: 41  NIPILSAAMDTVTESRLAIALAQEGGIG-----FIHKNMSIQYQIEEVKRVKRYESGVVI 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   V     L++   + +   F    VV   +KL GIIT  D+   F  DLN L V  V
Sbjct: 96  NPQCVTPDTTLLEVKALTTRNGFAGYPVVTNNKKLVGIITNRDVR--FITDLN-LPVATV 152

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        +       V +  + +  I   +VVD+    +G++   D  + 
Sbjct: 153 MTPKERLVTVTAVESREVVLMKMYEKRIEKALVVDNKFNLLGMITVKDFQKA 204


>gi|77459957|ref|YP_349464.1| signal transduction protein [Pseudomonas fluorescens Pf0-1]
 gi|77383960|gb|ABA75473.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 146

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +K    +++A+  ++EK  G + VV++   + GII+E D  R      +    
Sbjct: 14  KNQEVHQIKPDHMVLEALMKMAEKNVGALLVVEDDN-VVGIISERDYARKLVLHGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M+ N   +     +   + ++    +  L VV +  K IG++   DL++  I
Sbjct: 73  TPVRDIMVANVITVDTHQTVDTCLGIMSDKRLRHLPVV-ENGKLIGLLSIGDLVKEAI 129


>gi|332306914|ref|YP_004434765.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332174243|gb|AEE23497.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 636

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 60/149 (40%), Gaps = 20/149 (13%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-------- 260
           P  K     + A      G    ++     + +A   ++E+    V + +E         
Sbjct: 139 PDKKDNDSLLTAKVEKLIGQLPLILPPNTSVQEAALRMTEEGVSSVLISNEQVPNNQAST 198

Query: 261 ---------QKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                    + + GI+T+ DI  R   + L+ +  V D+M      +  +  +  AM L+
Sbjct: 199 ENNDDDTDDEPVIGIVTDVDIRSRLVAQGLDLSTPVTDIMTSQLNTVQSNQYVFEAMMLM 258

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +H +  L V+ +  + IG++   D+LR+
Sbjct: 259 LKHKVMHLPVLKNS-RPIGLISHQDILRY 286


>gi|331653996|ref|ZP_08354997.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M718]
 gi|331048845|gb|EGI20921.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M718]
          Length = 306

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K   +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  + 
Sbjct: 128 KENTAAMYATLNVNSEEKLHECVVMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAA 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                 A    +   + DDL++ +S++G   EL        R    ++AIT    + +  
Sbjct: 187 AERDMHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQ 246

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            A   L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 247 RASHCLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 286


>gi|327311997|ref|YP_004338894.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326948476|gb|AEA13582.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 276

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 59/129 (45%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  L         +  +  ++   +    + +AI++  +  FG + VVDE  +L GI TE
Sbjct: 69  GKSLYGDVYMRPAIEFATRNVITARPNMTVGEAISLFLKHNFGSMPVVDEDGRLVGIFTE 128

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D  +   +      + DVM +   V+ + + +  A++ +  +      +VD+  K I +
Sbjct: 129 WDAMKIVAQAGFPHQIRDVMTRIVYVLTKYSTVMDALEGITVYRFRRYPIVDEKGKVISM 188

Query: 330 VHFLDLLRF 338
           +H  D+LR+
Sbjct: 189 LHAKDVLRY 197



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 12/108 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----------RNFHKDLNTL 283
               +IDA+  + E     + +V + + L GIIT  DI            ++ + D+   
Sbjct: 21  EKDKVIDALRKMVELDIRRLPIV-KDKSLLGIITALDILDAIYSFVESGGKSLYGDVYMR 79

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +   +N      +  +  A+ L  +HN   + VVD+  + +GI  
Sbjct: 80  PAIEFATRNVITARPNMTVGEAISLFLKHNFGSMPVVDEDGRLVGIFT 127



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 14/114 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLSVEDVMI- 290
             ++DA+  ++  RF    +VDE  K+  ++   D+ R F  +          V++++  
Sbjct: 159 STVMDALEGITVYRFRRYPIVDEKGKVISMLHAKDVLRYFADESTFNKAKEGDVDEIVNE 218

Query: 291 ------KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
                 K+P      D  +T  ++ + ++++  + VVD +    IG+V    LL
Sbjct: 219 YAINIAKSPIFLASPDDYVTDIVKKMLEYDVGGVPVVDRESGNVIGMVTEKTLL 272



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+ +  + +V  KN   + E   +  A++ + + +I  L +V   +  +GI+  LD+L  
Sbjct: 2   DVLSTPLAEVATKNVVTLGEKDKVIDALRKMVELDIRRLPIV-KDKSLLGIITALDILDA 60


>gi|312112067|ref|YP_003990383.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. Y4.1MC1]
 gi|311217168|gb|ADP75772.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. Y4.1MC1]
          Length = 187

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L  +       +    V  I   K ++ + G G+SG +    A  +   G  ++ V 
Sbjct: 13  LQELNRTADFIADEEAEKLVNGILQAK-KIFVAGAGRSGFMSKSFAMRMMHMGLDAYVVG 71

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                +     + +DD++I+ S SG +  L ++   A+     +  +T    S +   AD
Sbjct: 72  ETITPN-----LEQDDILIIGSGSGETRSLVSMAEKAKSLGATIALVTIFPASTIGKLAD 126

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           I + LP  P+         + P  S   Q      DA+ +  +E +    N  +  H
Sbjct: 127 ITVKLPGSPKDQADNGYKTIQPMGSLFEQTLLLFYDAVILRCMEKKGLDSNTMFKRH 183


>gi|121533419|ref|ZP_01665247.1| transcriptional regulator, RpiR family [Thermosinus carboxydivorans
           Nor1]
 gi|121307978|gb|EAX48892.1| transcriptional regulator, RpiR family [Thermosinus carboxydivorans
           Nor1]
          Length = 281

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/182 (18%), Positives = 63/182 (34%), Gaps = 6/182 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  Q   + I +    +  L + +  E         E +     +++  G+G S  I 
Sbjct: 90  NDSLEQIRQKVITSTVNSIQDLNNLISTE---TIERVCELMINAD-QILFFGVGASSAIA 145

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  + ++             T + ++  +S SG S ++   +  A+    
Sbjct: 146 MDAFHKFIRLGLKAAYLSDTHYMSIACNNTTCNSVVFAVSHSGESRDILDAVDLAKDNKA 205

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +IA+TS   S +A  A   L          +      S I+QL I D L + L+     
Sbjct: 206 NIIALTSYAHSSLAKRAQYSLLSS--SNETKYRSDAMVSRILQLVIVDILYVTLVLKLGQ 263

Query: 200 SE 201
           S 
Sbjct: 264 SA 265


>gi|70727418|ref|YP_254334.1| hypothetical protein SH2419 [Staphylococcus haemolyticus JCSC1435]
 gi|68448144|dbj|BAE05728.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 182

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 15/177 (8%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      Q+      +   + R+   G G+SG + +  A  L   G  +F V 
Sbjct: 11  LEELDRTLSHVQDEQYDRFANDVNGAQ-RIFTAGKGRSGFMANSFAMRLNQLGKEAFVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL ++LS SGS++ L+ +   A+     ++ +T+   S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFVILSGSGSTEHLRLLAEKAQSIGAKVVLLTTSPDSPIGELAE 124

Query: 158 IVLTLP------KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP       E    P G     S+++     D++ + L+E+ + SE +    H
Sbjct: 125 TVIELPAGTKHNVEGSEQPLGSLFEQSSLL---FLDSVVLGLMETFDISEEEMQNNH 178


>gi|331678415|ref|ZP_08379090.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
 gi|331074875|gb|EGI46195.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H591]
          Length = 352

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 158 SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 214

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 215 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 274

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 275 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 331


>gi|331684084|ref|ZP_08384680.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
 gi|331079036|gb|EGI50238.1| putative transcriptional regulator, RpiR family [Escherichia coli
           H299]
          Length = 285

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|307265981|ref|ZP_07547529.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|306919045|gb|EFN49271.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter wiegelii Rt8.B1]
          Length = 370

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L  AI I+S      + VV++  +L GI+T  DI            +E++  +N  
Sbjct: 263 PSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDIR---ANKNTAKRIEEIYTRNVY 319

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  D  +   ++L+ Q NI  + VV++     G++ 
Sbjct: 320 TVKPDDSILDVLKLMAQKNIGYVPVVNENNLLQGLIT 356



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D+MI NP   L    L  A++++    +  ++VV+   + +GIV   D+
Sbjct: 250 AKDIMITNPIKALPSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDI 300



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             ++  VK    ++D + ++++K  G V VV+E   L+G+IT
Sbjct: 315 TRNVYTVKPDDSILDVLKLMAQKNIGYVPVVNENNLLQGLIT 356


>gi|301118278|ref|XP_002906867.1| myosin-like protein [Phytophthora infestans T30-4]
 gi|262108216|gb|EEY66268.1| myosin-like protein [Phytophthora infestans T30-4]
          Length = 550

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 10/138 (7%)

Query: 204 FYVLHPGGKLGTLFVCASD-----VMHSGDSIPLVKIG-CPLIDAITILSEKRFGCVAVV 257
           F     G K  T     S      V     S  L++     +   +  + E++     +V
Sbjct: 19  FSTKKAGRKTKTHQQHRSHSHSRSVKRMRPSRALLQGDHATVAQCVRAMVERKTDAALLV 78

Query: 258 DEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           D    L GI+T+ D+        +D       +VM  +P  +  ++    A++ +     
Sbjct: 79  DRNGLLTGILTDRDVAVKVVAVGRDPGRTLAHEVMTPDPSCVSANSSAIDALKKMISGQF 138

Query: 315 SVLMVVDDCQKAIGIVHF 332
             L V D+  K +GI+  
Sbjct: 139 RHLPVTDND-KVVGILDI 155



 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              S ++  G  +P++      +DA  ++  ++   V V DE  +  GI T  D+ R   
Sbjct: 207 PTLSAILMEGSEVPVLGPSSTAMDAARMMLIQKTSAVMVCDEAGRTVGIFTSKDLMRRVV 266

Query: 278 K---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               + N   +  VM  NP+     T +   +  +       + V D+  K +GIV  L 
Sbjct: 267 ASSLEPNQCVLSSVMTPNPQTATLGTTILETLHSMHNGKFLHVPVFDNGTKLVGIVDVLQ 326

Query: 335 LLRFGII 341
           + R G+I
Sbjct: 327 VTR-GVI 332


>gi|225174422|ref|ZP_03728421.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225170207|gb|EEG79002.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 148

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 55/133 (41%), Gaps = 27/133 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V     + D   IL E R   V VVD+ Q++ G++TEGD+                    
Sbjct: 14  VSQEATINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLIHQDKKLHTPAFLEILGGVI 73

Query: 274 -----RNFHKDLNTLSVE---DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                +   KDL  ++     ++M +    + EDT +     ++ +  ++ + VVD   K
Sbjct: 74  YLENPQRVAKDLEKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAAGK 133

Query: 326 AIGIVHFLDLLRF 338
             GIV   DL++ 
Sbjct: 134 LTGIVSRQDLVKA 146



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 28/52 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++M  N   + ++  +     +L +H IS + VVD  Q+ +G+V   DL+
Sbjct: 3   AKEIMTTNVISVSQEATINDVAAILVEHRISGVPVVDKEQRVVGMVTEGDLI 54



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 26/62 (41%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   V      +  VK   P+ D  T++ E++   V VVD   KL GI++  D+ +
Sbjct: 86  EKMTATKVVEIMTRKVFTVKEDTPIEDIATMMVERQVNRVPVVDAAGKLTGIVSRQDLVK 145

Query: 275 NF 276
             
Sbjct: 146 AM 147


>gi|297619903|ref|YP_003708008.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297378880|gb|ADI37035.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 300

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 1/99 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            + DA  +L+E     + ++ +  KLKGI++  DI +   ++     ++ +M K+   I 
Sbjct: 189 TVRDAAKLLAENSISGIPII-KNGKLKGIVSLHDIAKALVQNKENEKIDAIMTKDIWTIN 247

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +  A+  +   NI  L+VVDD +  +G++   D+L
Sbjct: 248 QYEKIYDALVKMETENIGRLVVVDDSENIVGMLTRTDIL 286



 Score = 41.8 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 55/129 (42%), Gaps = 21/129 (16%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK-----GIITE 269
           +  +  +          LV++G  L + I I+     G +   D+   +      G+I+ 
Sbjct: 113 SSKIYINGDTKQFSEGDLVRVGPTLHNKIVIM-----GNIVGRDDINHILLIDVLGVISV 167

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I      D+ ++S+++    N  ++     +  A +LL +++IS + ++    K  GI
Sbjct: 168 PNI------DVGSISLKE----NLIIMDSGKTVRDAAKLLAENSISGIPII-KNGKLKGI 216

Query: 330 VHFLDLLRF 338
           V   D+ + 
Sbjct: 217 VSLHDIAKA 225


>gi|262275579|ref|ZP_06053388.1| Signal transduction protein [Grimontia hollisae CIP 101886]
 gi|262219387|gb|EEY70703.1| Signal transduction protein [Grimontia hollisae CIP 101886]
          Length = 614

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 55/111 (49%), Gaps = 3/111 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V     +      + + +    A+V +   L GI+++ ++  R   + ++ +  + DVM 
Sbjct: 162 VTPSTSIQQVAKQMRDHQGSTCALVLDDGALVGIVSQRNLSNRVVAEAMDVSAPIRDVMT 221

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF-GI 340
            +P  + +D L+  A+ L+ +HN+  + ++D  +  +G+V    L++  G+
Sbjct: 222 PDPYTLRQDELVLSAVNLMMKHNVQHVPIIDADKHVLGLVTPKQLVQKHGV 272



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 29/68 (42%), Gaps = 3/68 (4%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKAI 327
           + ++     K +    V++V   +   +   T +    + +R H   +  +V+DD    +
Sbjct: 136 DSELMEA-GKGIYFKPVKEVAYCDVVTVTPSTSIQQVAKQMRDHQGSTCALVLDD-GALV 193

Query: 328 GIVHFLDL 335
           GIV   +L
Sbjct: 194 GIVSQRNL 201


>gi|56460527|ref|YP_155808.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
 gi|56179537|gb|AAV82259.1| Signal-transduction protein [Idiomarina loihiensis L2TR]
          Length = 617

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 69/168 (41%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P +         D+ A A+    +   N   V     +  +L      ++        
Sbjct: 106 FIPGSLFNRLFDEYDSFADAVEVEGHRRINQ-AVKEQENRNESLSATVDTIITREPVS-- 162

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIF-RNFHKDLNTL-SVEDVM 289
           + +   + DA   +++++   + ++DE Q L  GIIT+ D+  R    + ++   V  +M
Sbjct: 163 IDLNASIHDAAAKMTDEKVSSLLIIDETQHLPVGIITDKDLRKRVLAVNRSSTHPVSSIM 222

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +N   +  +  +  A+ ++ + N+  L V+    + +G++   D+ +
Sbjct: 223 TENLTFVQHNNRVFEALLIMMRTNLHHLPVL-KKGQVVGVIALSDVAQ 269


>gi|263506435|sp|Q83K75|MURR_SHIFL RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
          Length = 266

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--MALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++ 
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQH 265


>gi|289580323|ref|YP_003478789.1| signal transduction protein with CBS domains [Natrialba magadii
           ATCC 43099]
 gi|289529876|gb|ADD04227.1| putative signal transduction protein with CBS domains [Natrialba
           magadii ATCC 43099]
          Length = 140

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
                + +  T + E   G V + D G +  GI+T+ D+         D    +  DVM 
Sbjct: 15  HEDESVQELATRMDESHVGSVVITD-GDEPIGIVTDRDLATRVLGDGMDPAETTASDVMS 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            N   + +      A +L+ +H I  L V DD  + +GI+   DL
Sbjct: 74  DNITTVDQTAGFYEATELMSEHGIRRLPVCDDSNELVGIITADDL 118



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 25/59 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
             D+I  V       +A  ++SE     + V D+  +L GIIT  D+      +   LS
Sbjct: 72  MSDNITTVDQTAGFYEATELMSEHGIRRLPVCDDSNELVGIITADDLNELLADEHLQLS 130


>gi|254509720|ref|ZP_05121787.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Rhodobacteraceae bacterium KLH11]
 gi|221533431|gb|EEE36419.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Rhodobacteraceae bacterium KLH11]
          Length = 607

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 47/135 (34%), Gaps = 4/135 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F             V ++  +             P+  A  I+ ++    + V  EG  L
Sbjct: 126 FNRTRGNRNGPHSLVTSTIDILMAHDPATCPPDTPVQTAARIMRDRHISSLCVT-EGDAL 184

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI T  DI   F  D       V  +M  NP  +    + +  +  + +  I  + +V 
Sbjct: 185 LGIATLRDISGKFVADAMPAATPVSSIMTANPITLAPSDIGSDVLHTMMERGIGHIPIV- 243

Query: 322 DCQKAIGIVHFLDLL 336
           +  + +GIV   DL 
Sbjct: 244 EAGQLVGIVTQTDLT 258


>gi|183599369|ref|ZP_02960862.1| hypothetical protein PROSTU_02838 [Providencia stuartii ATCC 25827]
 gi|188021607|gb|EDU59647.1| hypothetical protein PROSTU_02838 [Providencia stuartii ATCC 25827]
          Length = 488

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  +      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTATIRLNIPMLSAAMDTVTESDLAIALAQEGGLGFIHKNMSIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   +     F    VV   + L GIIT  D+   F  
Sbjct: 89  HESGVV---TDPVTVTPETTIREVQEMAERNGFAGYPVVAADKSLVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL+   V  VM        + E     V +Q + +  +   +V+DD    +G++   D  
Sbjct: 144 DLDQ-PVTAVMTPKERLVTVKEGEAREVVLQKMHEKRVEKALVIDDNFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|325568966|ref|ZP_08145259.1| CBS domain protein [Enterococcus casseliflavus ATCC 12755]
 gi|325158004|gb|EGC70160.1| CBS domain protein [Enterococcus casseliflavus ATCC 12755]
          Length = 215

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V    P+ DAI ++ +     + VVD+  KL G+ITEG I             
Sbjct: 7   MTKTVITVDSQTPIFDAIDVMKQHDIHRLPVVDD-GKLVGLITEGTIAEATPSKATSLSV 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  LN  +V D+M+K    I  + LL  A+ ++R  N+ VL V+DD    +GI+   
Sbjct: 66  YEMNYLLNKTTVADIMLKKVTTIEPEALLEDAISVMRSENVGVLPVMDDD-ALVGIITNN 124

Query: 334 DLLRF 338
           D+   
Sbjct: 125 DIFDA 129



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV D M K    +   T +  A+ +++QH+I  L VVDD  K +G++ 
Sbjct: 1   MSVSDFMTKTVITVDSQTPIFDAIDVMKQHDIHRLPVVDD-GKLVGLIT 48



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  ++    L DAI+++  +  G + V+D+   L GIIT  DIF  F K
Sbjct: 81  MLKKVTTIEPEALLEDAISVMRSENVGVLPVMDDD-ALVGIITNNDIFDAFLK 132


>gi|315651915|ref|ZP_07904917.1| RpiR family transcriptional regulator [Eubacterium saburreum DSM
           3986]
 gi|315485744|gb|EFU76124.1| RpiR family transcriptional regulator [Eubacterium saburreum DSM
           3986]
          Length = 280

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 69/162 (42%), Gaps = 6/162 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + +  L + +  +L  +   A++  K    +V + G+G SG +   +   L+  G    F
Sbjct: 105 KSIEKLYALMDMDLIEKSIDAIDLAK----KVYLFGVGASGIVCYDINYKLSRIGKDVVF 160

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
            +       +L  IT++D  + +S+SG++ E   +   A++     + I    K+ ++  
Sbjct: 161 NNDIHLQLVNLNFITKEDSCVCVSYSGNTKETVLVAEIAKKAGAKTVGICCYGKNELSKI 220

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            DI L +P +      G   + +  +   + D + +A+    
Sbjct: 221 CDITLRVPHDERELRLGAISSRNTTLT--LLDTIYLAITHRH 260


>gi|313679266|ref|YP_004057005.1| RpiR family transcriptional regulator [Oceanithermus profundus DSM
           14977]
 gi|313151981|gb|ADR35832.1| transcriptional regulator, RpiR family [Oceanithermus profundus DSM
           14977]
          Length = 281

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 8/173 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A +   A  R L     SL           V+ I   K R +I G+G S  I     +
Sbjct: 97  EIAQKVFAAANRALLETLQSLDT---AGIERVVDLIDGAK-RTLIIGVGTSAPIAQTFYN 152

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G P +    +        ++  DD+++ +S +G+S +    L  A++     +AI
Sbjct: 153 RLFRLGLPVWIQTDSYLQLMHAALLGPDDVVVGISQTGASTDPVLTLEEAKKHGAATVAI 212

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           T    S +   AD+ L                +S I Q+AI + + +AL   R
Sbjct: 213 TGSLSSPITQQADVTLYSSYHE----LRPEAASSRIAQIAIVETIYVALSMRR 261


>gi|301053805|ref|YP_003792016.1| RpiR family transcriptional regulator [Bacillus anthracis CI]
 gi|300375974|gb|ADK04878.1| transcriptional regulator, RpiR family [Bacillus cereus biovar
           anthracis str. CI]
          Length = 176

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 62/148 (41%), Gaps = 3/148 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ ++    R+   G G SG I +        TG        +       G++
Sbjct: 12  DTALEQAVKDLQEA-NRIEFYGNGGSGIIATDAYHKFMRTGISCIAHTDSHFQIMGAGLL 70

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           +++ ++I +S SGS+  L   L  A+     +IAITS  KS ++  ADI L         
Sbjct: 71  SKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLADITLYTSTRETEF 130

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESR 197
               +  +S + QL++ D L + L   R
Sbjct: 131 RTEAS--SSRLAQLSLIDTLYVGLSLQR 156


>gi|159041203|ref|YP_001540455.1| signal-transduction protein [Caldivirga maquilingensis IC-167]
 gi|157920038|gb|ABW01465.1| putative signal-transduction protein with CBS domains [Caldivirga
           maquilingensis IC-167]
          Length = 143

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 65/119 (54%), Gaps = 5/119 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK--DLN 281
           +  S  ++K+G P+++AI ++++   G V +VD  E +K+ G+I+E D+ R   K  D++
Sbjct: 8   TRKSPIVIKVGSPVMEAIKLMADNNVGLVVIVDSPENKKVLGVISERDVIRALAKGIDIS 67

Query: 282 TLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             +VE V    N   +     +T   +L+ +  +  ++V+DD  + + ++   DLL+  
Sbjct: 68  KATVEQVGTMGNIVSVKYYDYITTVARLMNERQVRHVVVIDDDNRVVSVISIRDLLKEK 126


>gi|15899455|ref|NP_344060.1| hypothetical protein SSO2740 [Sulfolobus solfataricus P2]
 gi|284174298|ref|ZP_06388267.1| hypothetical protein Ssol98_06517 [Sulfolobus solfataricus 98/2]
 gi|13816068|gb|AAK42850.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601225|gb|ACX90828.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 250

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 52/125 (41%), Gaps = 1/125 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT              + +V     +   + I+     G + VVD    + GI TE +I 
Sbjct: 60  GTNIYDLKVKDIMSKDLVIVSPNDDVNHVVRIMLMNNIGGIPVVD-NNVIVGIFTEREIL 118

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +     + +  V+ VM  N   I E+  +  A +L+  +N+  L V     + +GI+   
Sbjct: 119 KLIASSMFSGLVDSVMSSNIISIGEENTIMDAAKLMVMNNVRRLPVFSKDNRLVGIITAA 178

Query: 334 DLLRF 338
           D++++
Sbjct: 179 DIVKY 183



 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 1/133 (0%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +             +I  +     ++DA  ++       + V  +  +L
Sbjct: 112 FTEREILKLIASSMFSGLVDSVMSSNIISIGEENTIMDAAKLMVMNNVRRLPVFSKDNRL 171

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GIIT  DI +   K+ N   V D   KNP  I     +  A +L+ +  I  L+V+ + 
Sbjct: 172 VGIITAADIVKYLAKNKNIGKVLDAGTKNPITINRYYSILNAAKLMIEKRIGTLLVM-EN 230

Query: 324 QKAIGIVHFLDLL 336
           QK +GIV   DL+
Sbjct: 231 QKLVGIVTERDLM 243



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 59/116 (50%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
           +   +  +     L +AI ILS    G + VV + +K  GI++  D+  +F +   ++  
Sbjct: 7   ANPIVITIFPESSLKEAIDILSNNPSGRI-VVLKEEKPIGIVSTRDVVASFSEYGTNIYD 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V+D+M K+  ++  +  +   ++++  +NI  + VVD+    +GI    ++L+ 
Sbjct: 66  LKVKDIMSKDLVIVSPNDDVNHVVRIMLMNNIGGIPVVDN-NVIVGIFTEREILKL 120



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/39 (38%), Positives = 25/39 (64%), Gaps = 1/39 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +++A  ++ EKR G + V+ E QKL GI+TE D+   +
Sbjct: 209 SILNAAKLMIEKRIGTLLVM-ENQKLVGIVTERDLMYAY 246


>gi|213418626|ref|ZP_03351692.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
          enterica serovar Typhi str. E01-6750]
          Length = 87

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 4/81 (4%)

Query: 19 MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
          M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1  MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79 GSKLASTLASTGTPSFFVHAA 99
          G K+A+TLASTGTP+FF  + 
Sbjct: 57 GKKIAATLASTGTPAFFCSSG 77


>gi|260434018|ref|ZP_05787989.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417846|gb|EEX11105.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Silicibacter lacuscaerulensis ITI-1157]
          Length = 607

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 22/137 (16%), Positives = 44/137 (32%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P                             + DA  ++ ++    V +  +   L
Sbjct: 126 FNRARPARPEQQSLATTRVETLMARKPATCTPDTTVQDAARLMRDRGISSVCIT-QRGAL 184

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T  D+           T  V  +M  +P  +    + +  +  + +  I  + +  
Sbjct: 185 RGIATVRDLSSKVVAGALPPTTPVSQIMSPDPLTLSPSDIGSDVLHAMLERGIGHIPIT- 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +GIV   DL RF
Sbjct: 244 EGGRLVGIVTQTDLTRF 260


>gi|289578809|ref|YP_003477436.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Thermoanaerobacter italicus Ab9]
 gi|297545029|ref|YP_003677331.1| glycine betaine/L-proline ABC transporter ATPase
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|289528522|gb|ADD02874.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter italicus Ab9]
 gi|296842804|gb|ADH61320.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 370

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L  AI I+S      + VV++  +L GI+T  DI            +E++  +N  
Sbjct: 263 PSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDIR---ANKNTAKRIEEIYTRNVY 319

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  D  +   ++L+ Q NI  + VV++     G++ 
Sbjct: 320 TVKPDDSILDVLKLMAQKNIGYVPVVNENNLLQGLIT 356



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D+MI NP   L    L  A++++    +  ++VV+   + +GIV   D+
Sbjct: 250 AKDIMITNPIKALPSRTLAQAIEIMSNSGVDSILVVNKENQLLGIVTAEDI 300



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             ++  VK    ++D + ++++K  G V VV+E   L+G+IT
Sbjct: 315 TRNVYTVKPDDSILDVLKLMAQKNIGYVPVVNENNLLQGLIT 356


>gi|301165799|emb|CBW25371.1| conserved hypothetical protein [Bacteriovorax marinus SJ]
          Length = 153

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/151 (21%), Positives = 58/151 (38%), Gaps = 29/151 (19%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-- 271
              ++  S+ M              + +A  I+ +K F  + VVD    L GI+TE D  
Sbjct: 1   MRKYMKVSEFMTKDVISC--TEENTVEEAAKIMHDKGFSVMPVVDGAGALVGILTESDFV 58

Query: 272 ------------IFRNFHKDLNTLSVED------------VMIKNPKVILEDTLLTVAMQ 307
                       I + F ++      E+            VM K+   +  D  L+  + 
Sbjct: 59  GTDANIPHALASIKKLFGQNFYFSDAEEIYKKSKAKKLGEVMTKDVTTVTSDQSLSDVIS 118

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  +++  L VVD   K +GI+   DLL+ 
Sbjct: 119 VMSHNHLKRLPVVD-GGKLVGIITRKDLLKA 148



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V     L D I+++S      + VVD G KL GIIT  D+ + + K
Sbjct: 100 MTKDVTTVTSDQSLSDVISVMSHNHLKRLPVVD-GGKLVGIITRKDLLKAYTK 151


>gi|238758843|ref|ZP_04620016.1| Inosine-5'-monophosphate dehydrogenase [Yersinia aldovae ATCC
           35236]
 gi|238702951|gb|EEP95495.1| Inosine-5'-monophosphate dehydrogenase [Yersinia aldovae ATCC
           35236]
          Length = 464

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 60/170 (35%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 18  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 74

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     +     F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 75  QTVTPTTTLRQVKELTVRNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMT 131

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +  ++VVDD     G++   D  + 
Sbjct: 132 PKERLVTVKEGEAREVVLQKMHEKRVEKVLVVDDSFHLRGMITVKDFQKA 181


>gi|229823142|ref|ZP_04449211.1| hypothetical protein GCWU000282_00439 [Catonella morbi ATCC 51271]
 gi|229787308|gb|EEP23422.1| hypothetical protein GCWU000282_00439 [Catonella morbi ATCC 51271]
          Length = 277

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 2/144 (1%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           ++ +   R+++ G+G SG    +LA  L+  G P+     +        +    D++I +
Sbjct: 115 QVLSQANRIMVYGMGSSGLTARELAIRLSRMGLPATSETDSHMMIISSTVTRSSDVVIAI 174

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + ++   L  A++    L+AITS   S +A  AD  L +               +
Sbjct: 175 SNSGETKDVIDALGNAKQNGAILVAITSMKGSSLAKLADETLLVHNSRFVNSE--FFVNT 232

Query: 179 AIMQLAIGDALAIALLESRNFSEN 202
            +    + DA+ + +LE+  FS+N
Sbjct: 233 QLPIFFLIDAITLMMLENPVFSQN 256


>gi|119719396|ref|YP_919891.1| sugar isomerase (SIS) [Thermofilum pendens Hrk 5]
 gi|119524516|gb|ABL77888.1| hexulose-6-phosphate isomerase [Thermofilum pendens Hrk 5]
          Length = 202

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 71/186 (38%), Gaps = 20/186 (10%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  +   L  E   +F   +    A K ++++ G G+SG +    A  L   G   + V 
Sbjct: 16  IEKVAGELDKESVNRFLKILTSALATKSKILVVGAGRSGLVAKAFAMRLMHLGFNVYVVG 75

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I+  D++I +S SGS+  + ++   A+R    ++AITS  +S +   +D
Sbjct: 76  ETITP-----SISEGDVLIAVSGSGSTQVVLSVASAAKRAKAVVVAITSFAESPLGKISD 130

Query: 158 IVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSEN 202
            ++ +P   +                  LAP  +      +   D +  AL+      E 
Sbjct: 131 HIVVVPGRTKVAAETDYFARQVLGMYEPLAPLGTLFEDTVMVFFDGVIYALMNILGVGEE 190

Query: 203 DFYVLH 208
           D    H
Sbjct: 191 DMKKRH 196


>gi|297823463|ref|XP_002879614.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325453|gb|EFH55873.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 536

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R   V + D    L GI+T+ DI  R   + L      V  VM
Sbjct: 73  INEGTTVFDACRRMAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEGLRPEHTLVSKVM 132

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +NP  +  D+L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 133 TRNPIFVTSDSLAIEALQKMVQGKFRHLPVVENGE----VIALLDITK 176



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 66/159 (41%), Gaps = 6/159 (3%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
            G ALA A+   R++   +F  +    +        S ++     + LV    P+  A  
Sbjct: 191 QGSALATAVE-ERHWGSGNFAFIDTLRE-RMFKPALSTIVTENTKVALVSASDPVFVASK 248

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
            + + R   V ++  G K+ GI+T  D + R   ++L+     VE VM  NP+    +T 
Sbjct: 249 RMRDLRVNSV-IIAVGNKIHGILTSKDILMRVVAQNLSPELTLVEKVMTPNPECASIETT 307

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  A+ ++       L V+D    A+  +  L +    I
Sbjct: 308 ILDALHIMHDGKFLHLPVLDKDGFAVACLDVLQITHAAI 346


>gi|27379757|ref|NP_771286.1| hypothetical protein blr4646 [Bradyrhizobium japonicum USDA 110]
 gi|27352910|dbj|BAC49911.1| blr4646 [Bradyrhizobium japonicum USDA 110]
          Length = 228

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 24/136 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V     +     IL E+R   V VVD   K+ GI++EGD+             
Sbjct: 7   MVSPVVTVGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLLHRAESGTERSPS 66

Query: 274 ---RNFHKDL---------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              R    D          +++ V+DVM +       +T L     LL +  I  + +V+
Sbjct: 67  WWLRLLTGDAQLATDYVKSHSIKVQDVMTQEVATAAPETPLHEIAMLLEERQIKRVPIVN 126

Query: 322 DCQKAIGIVHFLDLLR 337
              + +GIV   +LL+
Sbjct: 127 KEGQLVGIVSRANLLQ 142



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             DVM+     +  +  +    Q+L +  IS + VVD   K +GIV   DLL
Sbjct: 3   ARDVMVSPVVTVGPNATVRQVAQILLERRISAVPVVDADNKVLGIVSEGDLL 54


>gi|119387182|ref|YP_918237.1| signal-transduction protein [Paracoccus denitrificans PD1222]
 gi|119377777|gb|ABL72541.1| putative signal-transduction protein with CBS domains [Paracoccus
           denitrificans PD1222]
          Length = 145

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V  G  + DA  +LSEKR G + V ++G+   GI++E DI R   +   D+  L + ++M
Sbjct: 18  VAPGASVADAAKLLSEKRIGAIVVSEDGKVPLGILSERDIVRELGRRGADVLGLPITELM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                         V +  + Q     L VVD+    +G++   D +   +
Sbjct: 78  THKLATCTTGEDALVILDRMTQGRFRHLPVVDEAGAMVGLISIGDAVSARL 128



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     +  A +LL +  I  ++V +D +  +GI+   D++R 
Sbjct: 17  TVAPGASVADAAKLLSEKRIGAIVVSEDGKVPLGILSERDIVRE 60


>gi|332755068|gb|EGJ85433.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           4343-70]
          Length = 265

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 90  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 146

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 147 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 206

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++ 
Sbjct: 207 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQH 264


>gi|330468206|ref|YP_004405949.1| cbs domain-containing membrane protein [Verrucosispora maris
           AB-18-032]
 gi|328811177|gb|AEB45349.1| cbs domain containing membrane protein [Verrucosispora maris
           AB-18-032]
          Length = 233

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 51/132 (38%), Gaps = 20/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------F 273
               +  V    P    + +L+E+R   V VVD+   + G+++E D+             
Sbjct: 10  MTRDVATVVEQTPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLLHKVEWMGEPHER 69

Query: 274 RNFHKDLNTLS--------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           R F       S          ++M          T L  A +L+ +  +  L VVDD  +
Sbjct: 70  RVFEGARQRRSRRKGEADNARELMTTPAVTTSPHTSLVAAAKLMDREQVKRLPVVDDMGR 129

Query: 326 AIGIVHFLDLLR 337
            +GIV   DLLR
Sbjct: 130 VVGIVTRSDLLR 141



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    VEDVM ++   ++E T     + LL +  +S + VVDD    +G+V   DLL
Sbjct: 1   MRAWQVEDVMTRDVATVVEQTPYRQIVDLLAERRVSAVPVVDDFGHVLGVVSEADLL 57


>gi|309389954|gb|ADO77834.1| putative signal transduction protein with CBS domains
           [Halanaerobium praevalens DSM 2228]
          Length = 263

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             +    + +   +++A  ILS  + G + V +E  K+ G++T+GDI     +      V
Sbjct: 8   MTNDPITISLNATIMEAEKILSINKIGRLLV-EEDGKVFGMLTDGDI---ISERDLEAPV 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D M  +   I E++ +  A + L  ++I  L V DD ++ +GIV   D++
Sbjct: 64  SDFMSDDLITINENSTVQQAAKKLSDNHIGGLPVFDDKKRLVGIVTSEDIV 114



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M  +P  I  +  +  A ++L  + I  L+V ++  K  G++   D++
Sbjct: 4   VKNIMTNDPITISLNATIMEAEKILSINKIGRLLV-EEDGKVFGMLTDGDII 54



 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 37/101 (36%), Gaps = 5/101 (4%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F +L  G  +    + A       D +  +     +  A   LS+   G + V D+ +
Sbjct: 43  KVFGMLTDGDIISERDLEAPVSDFMSDDLITINENSTVQQAAKKLSDNHIGGLPVFDDKK 102

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +L GI+T  DI   + KD       +      K I  ++  
Sbjct: 103 RLVGIVTSEDIVYGYLKDEEEEIEME-----KKTITPESSA 138


>gi|190575499|ref|YP_001973344.1| hypothetical protein Smlt3640 [Stenotrophomonas maltophilia K279a]
 gi|190013421|emb|CAQ47056.1| conserved hypothetical protein [Stenotrophomonas maltophilia K279a]
          Length = 120

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +IDAI +++EK  G V V+D G +L GI++E D  R      +     +V ++M      
Sbjct: 1   MIDAIRLMAEKGIGAVLVMD-GPRLVGILSERDYARKIVLRDRSSRDTAVAEIMTTQVVT 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     +   +QL+  + I  L VV+  Q  +G++   DL++
Sbjct: 60  VSPGEQVEHCLQLVTDYRIRHLPVVEGAQ-VLGVISIGDLVK 100


>gi|114331513|ref|YP_747735.1| signal-transduction protein [Nitrosomonas eutropha C91]
 gi|114308527|gb|ABI59770.1| putative signal-transduction protein with CBS domains [Nitrosomonas
           eutropha C91]
          Length = 146

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 5/118 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKD 279
           +   G  + ++     + DA+  ++    G + VV + +KL GI+TE D  R     ++ 
Sbjct: 8   LQEKGHDVVVIGPSDSVSDAMQKMTTNNIGALLVV-KDKKLIGILTERDFSRKYCLLNRS 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  + VE++M +    +  D      M L+ +  +  L V+DD    +GI+   DL++
Sbjct: 67  VKDMRVEEIMTRQVAYVGLDYTNEDCMALMTEICVRHLPVLDDGN-IVGILSIGDLVK 123



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 48/123 (39%), Gaps = 8/123 (6%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKL 213
              D+V+  P +  S       T +    L + D   I +L  R+FS     +      +
Sbjct: 11  KGHDVVVIGPSDSVSDAMQKMTTNNIGALLVVKDKKLIGILTERDFSRKYCLLNRSVKDM 70

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +    V +       V +     D + +++E     + V+D+G  + GI++ GD+ 
Sbjct: 71  RVEEIMTRQVAY-------VGLDYTNEDCMALMTEICVRHLPVLDDGN-IVGILSIGDLV 122

Query: 274 RNF 276
           ++ 
Sbjct: 123 KDI 125


>gi|330835646|ref|YP_004410374.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567785|gb|AEB95890.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 141

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI-KNP 293
           G P + AI +++    G V +     +L GIITE DI R   + ++    VE+    KN 
Sbjct: 19  GTPTVKAIEVMASHNIGSVVIT-HKGELAGIITERDIIRGIARGIDVNQPVEEFGTMKNL 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VI ED  +  A++ + + N+  L+VVD   K  G++   D++R 
Sbjct: 78  VVIGEDETIYNAVKKMAERNLRHLIVVDKYGKLKGVISVRDIIRE 122



 Score = 39.5 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 29/52 (55%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  ++ ++     + +A+  ++E+    + VVD+  KLKG+I+  DI R  H
Sbjct: 73  TMKNLVVIGEDETIYNAVKKMAERNLRHLIVVDKYGKLKGVISVRDIIRESH 124



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V++++ KN   + + T    A++++  HNI   +V+    +  GI+   D++R
Sbjct: 5   VKNLISKNLFTLEKGTPTVKAIEVMASHNIGS-VVITHKGELAGIITERDIIR 56


>gi|325958052|ref|YP_004289518.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325329484|gb|ADZ08546.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 186

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI- 272
           + +     +H   +  ++       ++DA  ++S  + G + +  E   L GIITE DI 
Sbjct: 1   MEMDTKVTVHDAMTPSVITADPKTTVVDAAVLMSRFKIGSLVIKGETGPL-GIITESDII 59

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   K+L  N +++  +M K+   I   + L  A +++ +++I  L V+D+    +GI+
Sbjct: 60  AKVVAKNLTANEINIGQIMTKDLIFIDPGSELNQAARIMAKNSIRRLPVIDN-GILVGIL 118

Query: 331 HFLDLL 336
              D+L
Sbjct: 119 TSTDVL 124


>gi|299482800|gb|ADJ19210.1| Elg6 [Escherichia coli]
          Length = 352

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 47/110 (42%), Gaps = 2/110 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NT 282
           M+      L+     +++A+ I++ +      VV+E   L G+IT+GDI R   K+L  T
Sbjct: 1   MNQQWKNVLISPDSSILEALEIINNEALRVALVVNENNTLLGVITDGDIRRGILKNLPLT 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             V  VM K P              L+  H I  + +VD     +G+   
Sbjct: 61  AEVHQVMNKKPVTASPVLSKKELNNLMSSHGILSIPIVDK-GIIVGLETI 109



 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I  D+ +  A++++    + V +VV++    +G++   D+ R GI+
Sbjct: 10  ISPDSSILEALEIINNEALRVALVVNENNTLLGVITDGDI-RRGIL 54


>gi|30063820|ref|NP_837991.1| hypothetical protein S2628 [Shigella flexneri 2a str. 2457T]
 gi|110806369|ref|YP_689889.1| hypothetical protein SFV_2480 [Shigella flexneri 5 str. 8401]
 gi|122957298|sp|Q0T281|MURR_SHIF8 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|30042075|gb|AAP17801.1| hypothetical protein S2628 [Shigella flexneri 2a str. 2457T]
 gi|110615917|gb|ABF04584.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
 gi|313650885|gb|EFS15285.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri 2a
           str. 2457T]
 gi|332755471|gb|EGJ85835.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-671]
 gi|332756490|gb|EGJ86841.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           2747-71]
 gi|332766237|gb|EGJ96447.1| DNA-binding transcriptional regulator [Shigella flexneri 2930-71]
 gi|333001561|gb|EGK21129.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           VA-6]
 gi|333001813|gb|EGK21379.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-218]
 gi|333016434|gb|EGK35765.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-304]
          Length = 266

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++ 
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQH 265


>gi|327400808|ref|YP_004341647.1| 6-phospho 3-hexuloisomerase [Archaeoglobus veneficus SNP6]
 gi|327316316|gb|AEA46932.1| 6-phospho 3-hexuloisomerase [Archaeoglobus veneficus SNP6]
          Length = 196

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/188 (22%), Positives = 74/188 (39%), Gaps = 16/188 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           +R +      ++SL+  L      +   A+E       ++ + G G+SG +    A  L 
Sbjct: 14  IRFLDTLGEQINSLKRELDPSQVEELIKAIE----GANKIFVMGAGRSGFVAKAFAMRLM 69

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF-SIPLIAITS 146
             G   + V            I RDD++I +S SG +  +  I   A+      L+AIT 
Sbjct: 70  HLGYNVYVVGETVTP-----RIGRDDVLISISGSGETTSVVNISRKAKELIGSKLVAITQ 124

Query: 147 ENKSVVACHADIVLTLPK----EPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFS 200
              S +A  +D+V+ L      + +     +AP  +     A    D L   L+  ++ +
Sbjct: 125 NKDSTLARMSDVVVLLRAKDKTQKDENLSSIAPLGTMFELTALIFLDGLVAELMSLKSLT 184

Query: 201 ENDFYVLH 208
           E D    H
Sbjct: 185 ERDLEQRH 192


>gi|238752467|ref|ZP_04613943.1| Inosine-5'-monophosphate dehydrogenase [Yersinia rohdei ATCC 43380]
 gi|238709316|gb|EEQ01558.1| Inosine-5'-monophosphate dehydrogenase [Yersinia rohdei ATCC 43380]
          Length = 464

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 59/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 18  NIPMLSAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEP 74

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L     + +   F    VV E  +L GIIT  D+   F  DL    V  VM 
Sbjct: 75  QTVTPTTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDL-EQPVTAVMT 131

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 132 PKDRLVTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 181


>gi|291296644|ref|YP_003508042.1| magnesium transporter [Meiothermus ruber DSM 1279]
 gi|290471603|gb|ADD29022.1| magnesium transporter [Meiothermus ruber DSM 1279]
          Length = 454

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 12/129 (9%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
             GG + + ++   D M   +    ++   P  + I ++         VVD  + L+G++
Sbjct: 138 EAGGIMTSEYIAVRDSMRVEEVFRFLRREAPDAEQIYVIY--------VVDAEEHLQGVL 189

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  D+     K      V ++M  +   + +DT      +L+  +N +VL VVD+ +K +
Sbjct: 190 TLRDLIVADPK----TRVAEIMNPDVIYVRDDTDQEEVARLMADYNFTVLPVVDEDKKLV 245

Query: 328 GIVHFLDLL 336
           GIV   D++
Sbjct: 246 GIVTIDDVV 254



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V+      +   ++++  F  + VVDE +KL GI+T  D+     ++
Sbjct: 207 MNPDVIYVRDDTDQEEVARLMADYNFTVLPVVDEDKKLVGIVTIDDVVDVIEEE 260


>gi|224826427|ref|ZP_03699529.1| inosine-5'-monophosphate dehydrogenase [Lutiella nitroferrum 2002]
 gi|224601528|gb|EEG07709.1| inosine-5'-monophosphate dehydrogenase [Lutiella nitroferrum 2002]
          Length = 487

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 64/171 (37%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H    +       S V         
Sbjct: 40  NLPMLSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMSIERQAQEVSKVKRYESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D I +  + R   + VV +  K+ GI+T  D+   F   L    V  +
Sbjct: 95  DPITIAPDMLVCDLINLTRQHRISGLPVV-QDGKVVGIVTNRDLR--FETRL-EQPVSSI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   +  A +L+ +H +  ++V++D  +  G++   D+++
Sbjct: 151 MTPRERLVTVKEGASIDEARELMHKHRLERVLVINDAWELKGLITVKDIIK 201


>gi|168187393|ref|ZP_02622028.1| nucleotidyl transferase [Clostridium botulinum C str. Eklund]
 gi|169294729|gb|EDS76862.1| nucleotidyl transferase [Clostridium botulinum C str. Eklund]
          Length = 345

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVE 286
             +  V     + DA+  + +   G V +VD  +K+ G++T+G+I R   K      +V+
Sbjct: 1   MDMYCVSSKATIKDAMEAIDKNLIGAVFIVDNDKKVIGVMTDGNIRRAILKGYKIEENVK 60

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           D+   N K + +        + + +H I  L ++D+  + I
Sbjct: 61  DICNTNFKYVSKLVSKQKVKEEMLKHKIRQLPLLDEQGRLI 101



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     +  AM+ + ++ I  + +VD+ +K IG++   ++ R 
Sbjct: 5   CVSSKATIKDAMEAIDKNLIGAVFIVDNDKKVIGVMTDGNIRRA 48


>gi|149181717|ref|ZP_01860209.1| CBS domain protein [Bacillus sp. SG-1]
 gi|148850565|gb|EDL64723.1| CBS domain protein [Bacillus sp. SG-1]
          Length = 144

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           + +    + E   G + +VD G  L G+IT+ DI       K   +  VE+VM      +
Sbjct: 20  VYEVAVKMKENDVGGIPIVD-GDHLVGMITDRDIVVRGVAEKHPGSSKVEEVMSDELVTV 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             DT +  A  L+ +H I  L VVD  QK IGIV   DL
Sbjct: 79  GADTTIDEAASLMSRHQIRRLPVVD-GQKLIGIVSLGDL 116



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V+++M +N +       +      ++++++  + +VD     +G++   D++  G+
Sbjct: 3   VKEIMSRNVETCTLLDNVYEVAVKMKENDVGGIPIVDGD-HLVGMITDRDIVVRGV 57



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G        +       D +  V     + +A +++S  +   + VVD GQKL GI++ G
Sbjct: 56  GVAEKHPGSSKVEEVMSDELVTVGADTTIDEAASLMSRHQIRRLPVVD-GQKLIGIVSLG 114

Query: 271 DI 272
           D+
Sbjct: 115 DL 116


>gi|301022315|ref|ZP_07186207.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|300397568|gb|EFJ81106.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
          Length = 285

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|297529034|ref|YP_003670309.1| hypothetical protein GC56T3_0685 [Geobacillus sp. C56-T3]
 gi|297252286|gb|ADI25732.1| CBS domain containing membrane protein [Geobacillus sp. C56-T3]
          Length = 214

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SVEDVM 289
            + +A+ +L   R   + VVD   +L G++T  D+          H+    L   V DVM
Sbjct: 19  TIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDLREASPSIFRLHEQWEDLEKPVGDVM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V      +     L  +H I  L +V +  K +GI+   DLLR
Sbjct: 79  KTDLIVGHPLDFVEEVAALFYEHRIGCLPIV-NHGKLVGIITQTDLLR 125



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE VM      +     +  A+QLLR H I  L VVD   + +G+V   DL   
Sbjct: 3   VEQVMKAPVITLRATNTIAEALQLLRHHRIRHLPVVDGEGRLVGLVTSQDLREA 56



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 10/130 (7%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +   + R  S + F +         L     DVM +   + +      + +   +  E R
Sbjct: 48  VTSQDLREASPSIFRLHEQ---WEDLEKPVGDVMKTD--LIVGHPLDFVEEVAALFYEHR 102

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            GC+ +V+   KL GIIT+ D+ R F +          + IK P    E  +L+ A  ++
Sbjct: 103 IGCLPIVN-HGKLVGIITQTDLLRTFIELTGVHQPGSQIEIKVP---NEAGMLSKAAAII 158

Query: 310 RQHNISVLMV 319
            + ++++  V
Sbjct: 159 SERHVNIASV 168


>gi|295839565|ref|ZP_06826498.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
 gi|197696853|gb|EDY43786.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
          Length = 305

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 49/199 (24%), Positives = 85/199 (42%), Gaps = 7/199 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  Q   + I  E   L    + L  ++      AV+ +   + RV I G+G SG +G 
Sbjct: 114 DSLAQVVDKIIYNESGTLEDTRAQLDLDV---LARAVDAVAGAR-RVDIFGLGASGFVGG 169

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G  +F      A+     ++   D+ I +S +GS+ +    L  A      
Sbjct: 170 DLHQKLHRIGHMAFVWTDGHAALTASALLGARDVAIGISHTGSTVDTLEPLQAAGERGAT 229

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            IA+T+  +S +A  AD+VLT          G   T S I QLA+ D L + + + ++++
Sbjct: 230 TIALTNFARSPLAECADLVLTTAVREMPLRSGA--TASRIAQLAVVDCLFVGVAQ-KSYA 286

Query: 201 ENDFYVLHPGGKLGTLFVC 219
           ++   +    G +  L   
Sbjct: 287 QSTAALARTYGAVRHLRGR 305


>gi|168703271|ref|ZP_02735548.1| Inosine-5-monophosphate dehydrogenase [Gemmata obscuriglobus UQM
           2246]
          Length = 493

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  S+ M       LAIAL +          ++H              V  S +    
Sbjct: 42  NIPILSSPMDTVTESELAIALAQEGGIG-----IIHKNLSAAAQTREVDKVKRSENGIIT 96

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A  ++ E     V +      LKGI+T  D+      D N   +E+V
Sbjct: 97  DPQTLPPDDTVGHARKLMEEHHISGVPITV-NGVLKGILTRRDLKFL---DDNEQKLEEV 152

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K N     E+T L  A ++L ++ +  L++VDD  +  G++   D+
Sbjct: 153 MTKKNLVTAPENTTLDAAEKILTKNKVEKLLLVDDQFRLKGLITIKDI 200


>gi|167565573|ref|ZP_02358489.1| CBS domain protein [Burkholderia oklahomensis EO147]
          Length = 154

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 127



 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 114 -GKLIGLVSIGDLVKSVIAD 132


>gi|168028206|ref|XP_001766619.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162682051|gb|EDQ68472.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 459

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +  G  + DA   ++ +R     + D    L GIIT+ D+  R   + L     SV  VM
Sbjct: 16  IPDGTTVADACRRMATRRVDAALLTDSNALLCGIITDKDVAIRIIAEGLKPEETSVSKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +NP  ++ DTL   A+Q + Q     L VV +  + + ++     L
Sbjct: 76  TRNPTFVMGDTLAVEALQKMVQGRFRHLPVV-EHGEVVALLDITKCL 121



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/266 (16%), Positives = 87/266 (32%), Gaps = 16/266 (6%)

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G   +     +A+    +  +  + A     G+IT  D+ I +   G   E  ++     
Sbjct: 19  GTTVADACRRMATRRVDAALLTDSNALL--CGIITDKDVAIRIIAEGLKPEETSVSKVMT 76

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEP-----------ESCPHGLAPTTSAIMQLA 184
           R    ++  T   +++          LP              +     +A    A  +  
Sbjct: 77  RNPTFVMGDTLAVEALQKMVQGRFRHLPVVEHGEVVALLDITKCLYDVIARIERAAEKGN 136

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
              A   ++    +   +D        +   L      ++    S+P       +  A  
Sbjct: 137 ALAAAVESVEREWSVKGSDESNFIQNLRDRMLRPTLRSLIAEVASVPTCSPSETVTVASK 196

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTL 301
            + E++   V +     K  GI+T  D + R   + L+  T +++ VM  NP+    DT 
Sbjct: 197 KMKEQQMNSVIITSSCSKPIGILTSKDVLMRVVAQGLHPETTTLDKVMTPNPECAGFDTT 256

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAI 327
           L  A+ ++       L V D     +
Sbjct: 257 LVDALHIMHDGKFLHLPVTDHDGFVV 282


>gi|56696908|ref|YP_167270.1| inosine-5'-monophosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
 gi|56678645|gb|AAV95311.1| inosine-5'-monophosphate dehydrogenase [Ruegeria pomeroyi DSS-3]
          Length = 482

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGG-----MGVIHKNLSVDEQAREVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    + DA  ++    F    V D    + GI+T  D+      D+    V  V
Sbjct: 94  NPVTLRPDQTIADAKALVERYNFTGFPVTDTRGHIVGIVTNRDMRFATSDDM---PVSAV 150

Query: 289 MIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  N   ++ E   L  A  L+R   I  L+V D   +  G++   D
Sbjct: 151 MTTNDLAMLAEPADLDEAKSLMRARRIEKLLVHDGQGRLTGLLTLKD 197



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  +  A  L+ ++N +   V D     +GIV   D+
Sbjct: 94  NPVTLRPDQTIADAKALVERYNFTGFPVTDTRGHIVGIVTNRDM 137


>gi|330685789|gb|EGG97423.1| DRTGG domain protein [Staphylococcus epidermidis VCU121]
          Length = 432

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  IL Y    ++ +I      +  V      +L           G  PT   I     
Sbjct: 104 ELSDILRYIGPQTLLIIGNRRNVQLEVLKRGTAILITG--------GFQPTKEVIQYADE 155

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
            D   ++         N         K+    +   D++   + + ++     L D   I
Sbjct: 156 HDLPVLSSSYDTFLVANIINRAMFNQKIRKEILVVEDIVKPINELSVLLNTMTLDDYKQI 215

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
            +E       VV++  KL GI+T  +I      D+    +EDVM K+P  +     +   
Sbjct: 216 ANETGHTRFPVVNKDYKLVGIVTSREIINMSDNDM----IEDVMTKHPISVKLSNTVASC 271

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             LL    I +L V D+ +KA+G+++  D+L+
Sbjct: 272 AHLLIWEGIELLPVTDNNKKAVGVINRQDVLK 303


>gi|124002149|ref|ZP_01687003.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
           marina ATCC 23134]
 gi|123992615|gb|EAY31960.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Microscilla
           marina ATCC 23134]
          Length = 649

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +        + +A  I+S    G + VV+      GIIT+ D  R      + + T
Sbjct: 177 PAKQMVSCSPTHTVWEAAKIMSIFNVGSILVVNNENYPVGIITDSDFRRKVVARQETIKT 236

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIVHFLDLL 336
             V ++M    K I  +  ++  M L+  + ++   V  D      A+GI+   DLL
Sbjct: 237 NPVTEIMSSPVKTIKPNLSVSEIMLLMVNNKVTHFCVTKDGTDASPALGIISQRDLL 293


>gi|83719424|ref|YP_441763.1| RpiR family transcriptional regulator [Burkholderia thailandensis
           E264]
 gi|83653249|gb|ABC37312.1| transcriptional regulator, RpiR family [Burkholderia thailandensis
           E264]
          Length = 334

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 111 RTIGALIEVRNSLSATSVADAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 169

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 170 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 228

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 229 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 269


>gi|70732987|ref|YP_262760.1| CBS domain-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68347286|gb|AAY94892.1| CBS domain protein [Pseudomonas fluorescens Pf-5]
          Length = 622

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +           PL +A+ ++ E++ G + VVDE +   GI T  D+ +        L  
Sbjct: 161 AMRHPVACSPQTPLREAVALMHEQQVGSIVVVDERKAPLGIFTLRDLRQVVADGTQDLNQ 220

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E  M + P  +  D     A   + + +I+ + +V   Q+  G+V   DL
Sbjct: 221 PIEQHMTQAPFFLSPDHSAFDAAIAMTERHIAHVCLV-KEQRLCGVVSERDL 271



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P      T L  A+ L+ +  +  ++VVD+ +  +GI    DL
Sbjct: 154 NTRLGELAMRHPVACSPQTPLREAVALMHEQQVGSIVVVDERKAPLGIFTLRDL 207



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 37/102 (36%), Gaps = 3/102 (2%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL--HPGGKLGTLFVCASDVMHSGDSI 230
             P   A+  +      +I +++ R      F +         GT  +      H   + 
Sbjct: 171 QTPLREAVALMHEQQVGSIVVVDERKAPLGIFTLRDLRQVVADGTQDLNQPIEQHMTQAP 230

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             +       DA   ++E+    V +V E  +L G+++E D+
Sbjct: 231 FFLSPDHSAFDAAIAMTERHIAHVCLVKEQ-RLCGVVSERDL 271


>gi|320094500|ref|ZP_08026273.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           178 str. F0338]
 gi|319978563|gb|EFW10133.1| inosine-5'-monophosphate dehydrogenase [Actinomyces sp. oral taxon
           178 str. F0338]
          Length = 507

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 56/171 (32%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       +AIA+            +LH    +         V  S     +
Sbjct: 47  RVPLLSAAMDTVTEARMAIAMARQGGIG-----ILHRNLSIEEQAAQVRQVKRSESGMVE 101

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D   +    R   + VV E   L GIIT  D+        + L V + 
Sbjct: 102 DPVTVGPDATIDDLDRLCGHYRVSGLPVVSEDGALLGIITNRDLRFVPESSWSRLHVREC 161

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M       V         A  LL +H +  L +VD+  +  G++   D ++
Sbjct: 162 MTPRDRLVVGQVGISREHAKHLLAEHRVEKLPIVDEDDRLTGLITVKDFVK 212


>gi|261401337|ref|ZP_05987462.1| inosine-5'-monophosphate dehydrogenase [Neisseria lactamica ATCC
           23970]
 gi|313668309|ref|YP_004048593.1| inosine-5'-monophosphate dehydrogenase [Neisseria lactamica ST-640]
 gi|269208623|gb|EEZ75078.1| inosine-5'-monophosphate dehydrogenase [Neisseria lactamica ATCC
           23970]
 gi|313005771|emb|CBN87225.1| putative inosine-5'-monophosphate dehydrogenase [Neisseria
           lactamica 020-06]
          Length = 487

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMPPEMQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTTLIREVLEMRAQRKRKMSGLPVVENGKVAGIVTNRDLRF---ENRVDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+  H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHTHKVERVLVLNEKDELKGLITVKDILK 203


>gi|148260628|ref|YP_001234755.1| signal-transduction protein [Acidiphilium cryptum JF-5]
 gi|326403821|ref|YP_004283903.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
 gi|146402309|gb|ABQ30836.1| putative signal-transduction protein with CBS domains [Acidiphilium
           cryptum JF-5]
 gi|325050683|dbj|BAJ81021.1| hypothetical protein ACMV_16740 [Acidiphilium multivorum AIU301]
          Length = 233

 Score = 82.3 bits (202), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 24/127 (18%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTLS---- 284
           V+    + DA  I+ ++    + V+D G +L GIIT+GD+ R        D+        
Sbjct: 14  VEPETTVADAGRIMLDQNLSALPVIDRGGRLLGIITDGDMLRRPELETAPDIGWWRGFLA 73

Query: 285 ---------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                          V ++M    + +  DT L  A+ ++  + +  L VV   +  +G+
Sbjct: 74  PETSARQFARTRGRHVGEIMTTPVRSVGPDTPLCDAIDIMETYRVKQLPVV-QGEILLGM 132

Query: 330 VHFLDLL 336
           ++  ++L
Sbjct: 133 LNRRNIL 139



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V ++M   P  +  +T +  A +++   N+S L V+D   + +GI+   D+LR
Sbjct: 3   VREIMTVGPLTVEPETTVADAGRIMLDQNLSALPVIDRGGRLLGIITDGDMLR 55


>gi|304315406|ref|YP_003850553.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588865|gb|ADL59240.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 269

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V       + I ++ E       V D    + G++T  D+           +
Sbjct: 10  YMTRDVITVSSDTSTAEIIKLMKETGHDGFPVKD-NGTVIGMVTAFDLL----IKPWVKT 64

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V ++M ++  V  +D  L  A +++ +  IS L V+D   K +GI+   D++R
Sbjct: 65  VSEIMSRDVVVADQDMSLNDAARVMFRMGISRLPVIDKEGKLVGIITNTDIVR 117



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N   V+D M ++   +  DT     ++L+++       V  D    IG+V   DLL
Sbjct: 3   NKALVKDYMTRDVITVSSDTSTAEIIKLMKETGHDGFPV-KDNGTVIGMVTAFDLL 57



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 217 FVCASDVMHSGDSIPLVK-IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 V        +V      L DA  ++       + V+D+  KL GIIT  DI R
Sbjct: 59  KPWVKTVSEIMSRDVVVADQDMSLNDAARVMFRMGISRLPVIDKEGKLVGIITNTDIVR 117


>gi|207738712|ref|YP_002257105.1| transcription regulation repressor hexr protein [Ralstonia
           solanacearum IPO1609]
 gi|206592080|emb|CAQ58986.1| transcription regulation repressor hexr protein [Ralstonia
           solanacearum IPO1609]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L++L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 114 RILQDTIDALAALRDRLDPR---ALDAAVALVEAAR-RIDLYGFGSSGVVARDAQTKFFR 169

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 170 YGIAANAYSDPYLVSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 228

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 229 GSRLAALADVTLPASVEAD 247


>gi|229137522|ref|ZP_04266129.1| CBS domain protein [Bacillus cereus BDRD-ST26]
 gi|228645882|gb|EEL02109.1| CBS domain protein [Bacillus cereus BDRD-ST26]
          Length = 147

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +     + S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIQMTRVRDLMSTHIVQCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM KN   +  D  +  A +L+ Q+ I  L VV +  + +G+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTKNIVSVSPDDPIEKATELMAQYQIRRLPVV-ESGQLVGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+ 
Sbjct: 5   EEIQMTRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVV 63

Query: 338 FGI 340
            GI
Sbjct: 64  RGI 66


>gi|82777820|ref|YP_404169.1| hypothetical protein SDY_2623 [Shigella dysenteriae Sd197]
 gi|123561973|sp|Q32DC7|MURR_SHIDS RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|81241968|gb|ABB62678.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVTCEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|239820152|ref|YP_002947337.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus S110]
 gi|239805005|gb|ACS22071.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus S110]
          Length = 145

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
           +    V  S     ++         DA  +++    G V V++    L GI+TE D+  R
Sbjct: 1   MAERTVFQSISRKHVISLGPQASARDAACVMTRANCGSVLVLELPDILLGILTERDLMTR 60

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +  D +  +V +VM  NP  +  +T ++ A+ L+ +     L +V    K +G+   
Sbjct: 61  VLARGLDPDRTTVREVMTPNPICVPPETPVSDAVVLMLERGFRHLPLV-AGTKILGVFSV 119

Query: 333 LDLL 336
            D L
Sbjct: 120 RDAL 123


>gi|168704059|ref|ZP_02736336.1| CBS domain containing protein [Gemmata obscuriglobus UQM 2246]
          Length = 133

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 44/123 (35%), Gaps = 3/123 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +     +        V  G  L DA+  + + R G V V   G +L GI+TE D 
Sbjct: 1   VEASLMREPVSVLDPRPPITVDAGATLGDAVRRMIDGRTGAVLVTGPGGELVGILTERDF 60

Query: 273 --FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              +          V + M   P+ +     L  A+  +       L VV +  + +G++
Sbjct: 61  LTKKTGAPGFEARPVREFMTLAPETVTPTDTLAFALGKMDAGAYRHLPVV-EGGRPVGVI 119

Query: 331 HFL 333
              
Sbjct: 120 SVR 122



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 8/46 (17%), Positives = 18/46 (39%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + P  +     L  A++ +       ++V     + +GI+   D L
Sbjct: 16  RPPITVDAGATLGDAVRRMIDGRTGAVLVTGPGGELVGILTERDFL 61


>gi|119871770|ref|YP_929777.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673178|gb|ABL87434.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 136

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFH 277
              +        +      L+     ++E   G V V+   + +K  GIITE DI +   
Sbjct: 6   RRVIELIRREPIVALPTETLVGVAEKMAENNIGAVVVISPQDPKKPVGIITERDIVKAVS 65

Query: 278 KDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  +  VE         I E+  +  A +L+  +NI  L+VVD+  +  G++   D+L
Sbjct: 66  MHMPLSTPVEAFATNRLITIDENETVEKAAELMLMYNIRHLVVVDNVGRLRGVISIRDVL 125

Query: 337 RF 338
           + 
Sbjct: 126 KA 127


>gi|317129330|ref|YP_004095612.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
 gi|315474278|gb|ADU30881.1| CBS domain containing protein [Bacillus cellulosilyticus DSM 2522]
          Length = 142

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 4/106 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVM 289
           +      + +A   + +   G + +  EG++L G+IT+ DI       K  N+  V DVM
Sbjct: 14  ICNPDDNVYEAALKMKQFDVGAIPIC-EGRQLLGMITDRDIVVRGVAEKRPNSTQVTDVM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +       D  +  A +++ +  I  L +V++ Q  +GIV   DL
Sbjct: 73  TEQLLTAEPDMTVDDAAKMMAEKQIRRLPIVENSQ-LVGIVALGDL 117



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 8/58 (13%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + D+M  + ++   D  +  A   ++Q ++  + +  + ++ +G++   D++  G+
Sbjct: 2   KKLRDIMTGDVEICNPDDNVYEAALKMKQFDVGAIPIC-EGRQLLGMITDRDIVVRGV 58


>gi|15238284|ref|NP_196647.1| CBS domain-containing protein [Arabidopsis thaliana]
 gi|20455364|sp|Q9LEV3|CBSX3_ARATH RecName: Full=CBS domain-containing protein CBSX3, mitochondrial;
           Flags: Precursor
 gi|13605728|gb|AAK32857.1|AF361845_1 AT5g10860/T30N20_130 [Arabidopsis thaliana]
 gi|8979720|emb|CAB96841.1| putative protein [Arabidopsis thaliana]
 gi|17978887|gb|AAL47413.1| AT5g10860/T30N20_130 [Arabidopsis thaliana]
 gi|332004220|gb|AED91603.1| CBS domain-containing protein [Arabidopsis thaliana]
          Length = 206

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E Q L GIITE D  R      +   +  V 
Sbjct: 74  WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQALAGIITERDYLRKIIVQGRSSKSTKVG 133

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+ D    IG+V   D++R 
Sbjct: 134 DIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGM-IGMVSIGDVVRA 186



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+ 
Sbjct: 111 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIK 170

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   + G+++ GD+ R  
Sbjct: 171 DKG-MIGMVSIGDVVRAV 187


>gi|323977392|gb|EGB72478.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TW10509]
 gi|324112941|gb|EGC06917.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia fergusonii B253]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEILLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|257209020|emb|CBB36496.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
           [Saccharum hybrid cultivar R570]
          Length = 205

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GI+TE D  R      +   +  V 
Sbjct: 73  WCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+D      G+V   D++R 
Sbjct: 133 DIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTGML-GMVSIGDVVRA 185



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+D 
Sbjct: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDG 170

Query: 260 GQKLKGIITEGDIFRNF 276
              L G+++ GD+ R  
Sbjct: 171 TGML-GMVSIGDVVRAV 186


>gi|218548133|ref|YP_002381924.1| DNA-binding transcriptional regulator [Escherichia fergusonii ATCC
           35469]
 gi|263505230|sp|B7LKK8|MURR_ESCF3 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|218355674|emb|CAQ88286.1| putative DNA-binding transcriptional regulator [Escherichia
           fergusonii ATCC 35469]
 gi|325496519|gb|EGC94378.1| DNA-binding transcriptional regulator [Escherichia fergusonii
           ECD227]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEILLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|163732760|ref|ZP_02140205.1| nucleotidyltransferase, putative [Roseobacter litoralis Och 149]
 gi|161394120|gb|EDQ18444.1| nucleotidyltransferase, putative [Roseobacter litoralis Och 149]
          Length = 619

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 10/145 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                     T     S       +      G  ++DA  +++ +   C+ +  E  +L 
Sbjct: 139 ARTDKSATQQTSLAQVSVDALMVHNPVTCTAGTSVVDAAVLMTSRHISCLCIT-EQDRLT 197

Query: 265 GIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D+  +     L     + D++   P  +    + +  + ++ ++N+  L +VD 
Sbjct: 198 GIVTLRDLVGKALAAGLPPQTPLSDIIQNEPVSLPPTAIGSDVLHMMMEYNLGHLPIVD- 256

Query: 323 CQKAIGIVHFLDLLR------FGII 341
             K +GIV   DL R       G++
Sbjct: 257 AGKLVGIVTQTDLTRYQATTAAGLV 281


>gi|121603563|ref|YP_980892.1| RpiR family transcriptional regulator [Polaromonas
           naphthalenivorans CJ2]
 gi|120592532|gb|ABM35971.1| transcriptional regulator, RpiR family [Polaromonas
           naphthalenivorans CJ2]
          Length = 281

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 54/164 (32%), Gaps = 6/164 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +++               AV  + A      R+   G+G SG +           G  S 
Sbjct: 101 VAAFLKYRNDASPLAIEKAVVALLAAYHTGKRIEFFGVGNSGIVAQDAQHKFFRLGIQSI 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        ++   D ++V+S SG + +L      AR+     I +T+   S +A 
Sbjct: 161 AYSDGHMQVMSASLLGPGDCVVVISNSGRTRDLMDACDIARKNGATTIVVTA-TASPLAM 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              I L          +  +P  S ++ L I D LA  +     
Sbjct: 220 AGHIHLAADHPEGYDRY--SPMVSRLLHLMIIDILATCVALRIG 261


>gi|325958054|ref|YP_004289520.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325329486|gb|ADZ08548.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 316

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 10/138 (7%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           PG  LG +     ++M     + ++     +  AI I+ +K  G + VVD   K+ GI++
Sbjct: 100 PGNFLGAINESVKEIM--TRDVEVITHKDSIDHAIDIMRKKEIGALPVVDADHKMVGIVS 157

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC----- 323
           E D        L    VED M KN       T +  A +++ ++ +  + VV +      
Sbjct: 158 ERDFVILLSGVLTDEVVEDYMTKNVIATTPGTRIEGASKIMVRNKLRRIPVVGEERKTSH 217

Query: 324 ---QKAIGIVHFLDLLRF 338
               K +GIV   D+L F
Sbjct: 218 PEKDKIMGIVTATDILEF 235



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 45/125 (36%), Gaps = 22/125 (17%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGIITEGDIFRNFHK-------- 278
            G  +  A  I+   +   + VV E          K+ GI+T  DI     K        
Sbjct: 187 PGTRIEGASKIMVRNKLRRIPVVGEERKTSHPEKDKIMGIVTATDILEFLGKNSAFERMI 246

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D+   ++ ++M KN      +T L      +   NI  L VV    +  GI+   
Sbjct: 247 SNDAEDVLNTTITEIMEKNVVATTANTRLGDLCTSMEHENIGGLPVV-YNGELEGIITER 305

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 306 DILKA 310



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 286 EDVMI---KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
            DVM    K      + T +  A + + ++    L + +    + +GIV  +D+L
Sbjct: 29  GDVMSIAKKTVVTAPQTTTIKEAAETMVKNKFRRLPITNPGTGQILGIVTSMDIL 83


>gi|309784848|ref|ZP_07679481.1| helix-turn-helix domain, rpiR family protein [Shigella dysenteriae
           1617]
 gi|308927218|gb|EFP72692.1| helix-turn-helix domain, rpiR family protein [Shigella dysenteriae
           1617]
          Length = 280

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVTCEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|302809978|ref|XP_002986681.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
 gi|300145569|gb|EFJ12244.1| hypothetical protein SELMODRAFT_446714 [Selaginella moellendorffii]
          Length = 545

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           +  G  + DA   +  +R     + D    L GIIT+ D+  R   ++L  +   V  VM
Sbjct: 54  IPDGTTVADACRRMVTRRVDAALLTDSTAMLCGIITDKDVATRVIAENLRPDETLVSKVM 113

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KNP  ++ D L   A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 114 TKNPVFVISDALAVDALQKMVQGKFRHLPVVENGE----VIALLDITK 157



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
               S +++    +  V     ++ A   + E R   V +     K +GI+T  D + R 
Sbjct: 207 RPTLSTLINENTKVATVSPSDTVLTATRKMREFRVNSVIITI-NNKPQGILTSKDVLMRV 265

Query: 276 FHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
              +L  ++ +V+ VM  NP+ +  +T +  A+  +       L VVD     +
Sbjct: 266 VASNLAPDSTTVDKVMTPNPECVTLETTIVDALHTMHDGKFLHLPVVDQENCIV 319


>gi|261377837|ref|ZP_05982410.1| inosine-5'-monophosphate dehydrogenase [Neisseria cinerea ATCC
           14685]
 gi|269146141|gb|EEZ72559.1| inosine-5'-monophosphate dehydrogenase [Neisseria cinerea ATCC
           14685]
          Length = 487

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPELQARAVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVTVAPTALIREVLEMRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRLDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +++  H +  ++V++D  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTCIDEAREVMHAHKVERVLVLNDQDELKGLITVKDILK 203


>gi|167572679|ref|ZP_02365553.1| CBS domain protein [Burkholderia oklahomensis C6786]
          Length = 154

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++EK  G + V+D G  + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAEKSIGALLVMD-GADIAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  + IG+V   DL++
Sbjct: 74  TRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD-GRLIGLVSIGDLVK 127



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLDRSSKATRVEEIMTSKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             +L G+++ GD+ ++   D
Sbjct: 114 -GRLIGLVSIGDLVKSVIAD 132


>gi|284922382|emb|CBG35469.1| RpiR-family transcriptional regulator [Escherichia coli 042]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEAISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|171060349|ref|YP_001792698.1| signal-transduction protein [Leptothrix cholodnii SP-6]
 gi|170777794|gb|ACB35933.1| putative signal-transduction protein with CBS domains [Leptothrix
           cholodnii SP-6]
          Length = 150

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK---DLNTL 283
            + +V+     + A  ++ +   G + VVD  E  +  GI+T+ D+         D    
Sbjct: 12  MVAVVEPDTQALVAAQLMRKHHVGALVVVDAAEQTRPVGIVTDRDLVLGLMAEGLDPALF 71

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D+M  +  +   +     A+ L+R+  +  ++VVDD  + +GI    D+L
Sbjct: 72  TVGDIMSTDLVLARPEMDALDAVALMRERRLHRIIVVDDVGRLVGIATVDDVL 124



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 3/58 (5%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRFGII 341
           +D       V+  DT   VA QL+R+H++  L+VVD  +  + +GIV   DL+  G++
Sbjct: 6   KDFATGMVAVVEPDTQALVAAQLMRKHHVGALVVVDAAEQTRPVGIVTDRDLV-LGLM 62



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + L +     +DA+ ++ E+R   + VVD+  +L GI T  D+     + L  LS 
Sbjct: 77  MSTDLVLARPEMDALDAVALMRERRLHRIIVVDDVGRLVGIATVDDVLAVLAQGLLDLSR 136

Query: 286 EDV 288
             +
Sbjct: 137 GAI 139


>gi|149926411|ref|ZP_01914672.1| hypothetical protein LMED105_13468 [Limnobacter sp. MED105]
 gi|149824774|gb|EDM83988.1| hypothetical protein LMED105_13468 [Limnobacter sp. MED105]
          Length = 653

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 3/105 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMI 290
                PL   + ++ E R G + VV+E   ++GI+T  D+       +   T  + +VM 
Sbjct: 200 CAPSTPLKQVLEVMHEHRIGSMIVVNEAMVVEGILTRQDVLSRVAMAQKPLTSQIAEVMN 259

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                + E      A  L+ +  I  + V     K  GIV   D+
Sbjct: 260 TPVHTLDESCTAQDAALLMSRFGIRHVPVT-RNGKLSGIVSERDI 303



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      + DV    P      T L   ++++ +H I  ++VV++     GI+   D+
Sbjct: 180 LAEQTLEKPLRDVCRHEPFSCAPSTPLKQVLEVMHEHRIGSMIVVNEAMVVEGILTRQDV 239

Query: 336 L 336
           L
Sbjct: 240 L 240


>gi|186470410|ref|YP_001861728.1| signal transduction protein [Burkholderia phymatum STM815]
 gi|184196719|gb|ACC74682.1| putative signal transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 151

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V     L     I     F  + VV E + L+G++++ D+ R           
Sbjct: 8   MTKRVVTVGFDDTLETVKDIFEHSGFHHLLVV-EDRSLQGVVSDRDLLRALSPFIDSVVE 66

Query: 277 -HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +D+ TLS  V  +M + P  +  D  +T A+QLL  H IS + +VD     +GIV + 
Sbjct: 67  TQRDIGTLSRRVHQIMSRKPITLRPDADVTDAIQLLLAHPISCIPIVDGEFHPVGIVSWR 126

Query: 334 DLLR 337
           D+L+
Sbjct: 127 DILK 130



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VED+M K    +  D  L     +        L+VV + +   G+V   DLLR 
Sbjct: 2   MKVEDLMTKRVVTVGFDDTLETVKDIFEHSGFHHLLVV-EDRSLQGVVSDRDLLRA 56



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            V+     +GTL      +M        ++    + DAI +L      C+ +VD      
Sbjct: 63  SVVETQRDIGTLSRRVHQIM--SRKPITLRPDADVTDAIQLLLAHPISCIPIVDGEFHPV 120

Query: 265 GIITEGDIFRNFHKDLNTLSVED 287
           GI++  DI +   + L      D
Sbjct: 121 GIVSWRDILKVCSELLGVARAAD 143


>gi|296332343|ref|ZP_06874804.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305673622|ref|YP_003865294.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
 gi|296150261|gb|EFG91149.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii ATCC
           6633]
 gi|305411866|gb|ADM36985.1| putative oxidoreductase [Bacillus subtilis subsp. spizizenii str.
           W23]
          Length = 140

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  +     + +A +++ +   G + VV E   LKG++T+ D  +           
Sbjct: 8   MTTQVATISPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDIALRTTAQGRDGQT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  +      +  L  A QL+ QH I  L +VD     +GIV   DL
Sbjct: 67  PVSEVMSTDLVSGNPNMSLEDASQLMAQHQIRRLPIVDQNN-LVGIVALGDL 117



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           SV + M      I  +  +  A  L++QHN+  + VV +     G++   D+
Sbjct: 3   SVRNTMTTQVATISPNQTIQEAASLMKQHNVGAIPVV-EQGVLKGMLTDRDI 53


>gi|291300247|ref|YP_003511525.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569467|gb|ADD42432.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 298

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 68/176 (38%), Gaps = 6/176 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++  Q   +   A+ R +      L           ++ +   + R+ + G+G S     
Sbjct: 107 DTLEQLVRKVAFADVRAIQETVERLD---LEALERVIDVLSTAR-RISLFGLGASAFAAQ 162

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L      +  +  +  + G   ++  DD+ + LS SG + E+   L  AR+    
Sbjct: 163 DLQHKLLRIDRMALAIPDSHLALGSAALLKPDDVAVGLSHSGQTAEVVECLTVARQHGAK 222

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            IAI +   S +   AD+V+T          G     S + QLA+ D + + + + 
Sbjct: 223 TIAIVNAAPSPLTEQADLVITTRVRESRFRSGA--MASRLAQLAVVDCVFLGIAQR 276


>gi|330507963|ref|YP_004384391.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928771|gb|AEB68573.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 286

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 59/121 (48%), Gaps = 10/121 (8%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           +    + +++   P+  A  ++ +   G + V+D   KL GI+T+ DI            
Sbjct: 9   YMSTPVNVIERNEPIQRARNLMFKYSIGRLPVMD-NGKLVGIVTKYDITNRISQAAPEWR 67

Query: 278 -KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + ++ + ++ VM + P  I  D  +  A +L+ +++IS L V +   + +G++   D++
Sbjct: 68  RRPIDKVPIQVVMTEKPITIFPDATMPQAAELMIENDISGLPV-EKDGEIVGVITSRDMV 126

Query: 337 R 337
           R
Sbjct: 127 R 127



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/118 (16%), Positives = 49/118 (41%), Gaps = 1/118 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     +   +    +     +  A  ++ E     + V ++  ++ G+IT  D+ 
Sbjct: 68  RRPIDKVPIQVVMTEKPITIFPDATMPQAAELMIENDISGLPV-EKDGEIVGVITSRDMV 126

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R+F +   + +V+++M KN   +     +   ++ +    IS  +V +D +  +GIV 
Sbjct: 127 RHFSEQDISSTVQELMSKNILNVHRHHTIGHVLEEMNVQGISRALVYEDNRTPVGIVT 184



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V+D M     VI  +  +  A  L+ +++I  L V+D+  K +GIV   D+ 
Sbjct: 4   KKVKDYMSTPVNVIERNEPIQRARNLMFKYSIGRLPVMDN-GKLVGIVTKYDIT 56



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 40/124 (32%), Gaps = 29/124 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT-----EGDIF-------------- 273
           V     +   +  ++ +      V ++ +   GI+T       DI               
Sbjct: 149 VHRHHTIGHVLEEMNVQGISRALVYEDNRTPVGIVTRSGLTFSDIMGPKDDMETKNIKMT 208

Query: 274 -------RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                  R  ++ +  +    EDVM      +  +T    A + L + +I  + VV D  
Sbjct: 209 RKESTAGRKQNRYVRQMPFVAEDVMTSPILSLTPETNAVEASKTLAEKHIIGMPVVKDND 268

Query: 325 KAIG 328
             +G
Sbjct: 269 -VVG 271


>gi|323188267|gb|EFZ73560.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           RN587/1]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVVCEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|262276712|ref|ZP_06054505.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium HIMB114]
 gi|262223815|gb|EEY74274.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium HIMB114]
          Length = 199

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
               P+ +    +  K+ G V +VD   KL GI++E DI        +D +  S +D+M 
Sbjct: 19  HTDTPVSEIALEIKNKKIGAVPIVDNENKLIGIVSERDIVTKMVVEARDPDLTSAKDIMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +      D  L   + +++  NI  + V D+           D L  
Sbjct: 79  TDIVSAHLDDDLEKTIGVMKSKNIRHMPVTDENGTLTDFFSIRDFLNA 126


>gi|225016723|ref|ZP_03705915.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
           DSM 5476]
 gi|224950527|gb|EEG31736.1| hypothetical protein CLOSTMETH_00633 [Clostridium methylpentosum
           DSM 5476]
          Length = 137

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 48/116 (41%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNT 282
               +  V     + +A  I+     G + V+  G KL G++T+ DI  R     +D   
Sbjct: 7   MSSHVATVNEQDTVSNAAEIMCRHDIGVLPVMKNGNKLVGMLTDRDIVLRCVADKRDQEN 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V ++M      I  +  L  A+Q++  H +  L V  +  K  GIV   D+ R 
Sbjct: 67  CKVGEIMTSTTLSIDPNKSLAEALQMMSNHQVKRLAVT-ENGKLSGIVSLSDIARI 121



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 31/52 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM  +   + E   ++ A +++ +H+I VL V+ +  K +G++   D++
Sbjct: 3   VKDVMSSHVATVNEQDTVSNAAEIMCRHDIGVLPVMKNGNKLVGMLTDRDIV 54


>gi|284928973|ref|YP_003421495.1| chloride channel protein EriC [cyanobacterium UCYN-A]
 gi|284809432|gb|ADB95137.1| chloride channel protein EriC [cyanobacterium UCYN-A]
          Length = 578

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            L D +  +         VV    KL GIIT+ D+ +  H  L+T  + D M  NP  I 
Sbjct: 471 TLDDVLKKMMISTHRGFPVV-SDGKLVGIITQIDLRKLSHIPLST-PLSDFMNPNPLTIK 528

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D  L+  + +L  H  S + V+ +  K +GI+   D++
Sbjct: 529 ADASLSDILHVLNHHQFSRVPVI-EGNKIVGIITRTDII 566


>gi|297569083|ref|YP_003690427.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924998|gb|ADH85808.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 214

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---------- 273
            +       +     +  A  +L    F  + VVD+   L G++T+ D+           
Sbjct: 5   KYMSAPPVTISPEITIPAARALLKSHHFRHLPVVDKEGGLLGMVTDRDLRSAYPSSVLDQ 64

Query: 274 --RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             R    +L    V  +M +    +  +  +  A+ LL +  +  L VVD   + +GI  
Sbjct: 65  DNRQHLAELEHKPVSAIMSQAVHTLSTEASIDDALLLLDREQVGALPVVDGQNRVLGIFS 124

Query: 332 FLDLLRF 338
             DL+R 
Sbjct: 125 VRDLMRA 131



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  M   P  I  +  +  A  LL+ H+   L VVD     +G+V   DL
Sbjct: 3   IKKYMSAPPVTISPEITIPAARALLKSHHFRHLPVVDKEGGLLGMVTDRDL 53



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              ++  +     + DA+ +L  ++ G + VVD   ++ GI +  D+ R +
Sbjct: 82  MSQAVHTLSTEASIDDALLLLDREQVGALPVVDGQNRVLGIFSVRDLMRAY 132


>gi|206580567|ref|YP_002237143.1| inosine-5'-monophosphate dehydrogenase [Klebsiella pneumoniae 342]
 gi|206569625|gb|ACI11401.1| inosine-5'-monophosphate dehydrogenase [Klebsiella pneumoniae 342]
          Length = 488

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V    + +  +   +VVD+     G++   D  + 
Sbjct: 155 PKERLVTVREGESREVVFAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 204


>gi|152971365|ref|YP_001336474.1| inosine 5'-monophosphate dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|288934102|ref|YP_003438161.1| inosine-5'-monophosphate dehydrogenase [Klebsiella variicola At-22]
 gi|150956214|gb|ABR78244.1| inositol-5-monophosphate dehydrogenase [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|288888831|gb|ADC57149.1| inosine-5'-monophosphate dehydrogenase [Klebsiella variicola At-22]
          Length = 488

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V    + +  +   +VVD+     G++   D  + 
Sbjct: 155 PKERLVTVREGESREVVFAKMHEKRVEKALVVDESFHLRGMITVKDFQKA 204


>gi|150401222|ref|YP_001324988.1| hypothetical protein Maeo_0793 [Methanococcus aeolicus Nankai-3]
 gi|150013925|gb|ABR56376.1| protein of unknown function DUF39 [Methanococcus aeolicus Nankai-3]
          Length = 511

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 2/111 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               L      + +A  IL E     + +VDE + L GIIT  DI R   ++ N  S+ +
Sbjct: 396 KPPILANQNISINEASKILIENGINHLPIVDENKNLVGIITSWDIARAVAQNKN--SILE 453

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M         D  + V  + +  +NIS   ++D  +K +G++   DL + 
Sbjct: 454 IMTATVISSTVDEPIDVLARKMSIYNISGAPILDKNKKVVGMITAEDLSKL 504



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D++ K P +  ++  +  A ++L ++ I+ L +VD+ +  +GI+   D+ R 
Sbjct: 390 VGDIISKPPILANQNISINEASKILIENGINHLPIVDENKNLVGIITSWDIARA 443


>gi|300858319|ref|YP_003783302.1| hypothetical protein cpfrc_00901 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|300685773|gb|ADK28695.1| hypothetical protein cpfrc_00901 [Corynebacterium
           pseudotuberculosis FRC41]
 gi|302206035|gb|ADL10377.1| Predicted signal-transduction protein containing cAMP-bindingn
           [Corynebacterium pseudotuberculosis C231]
 gi|302330588|gb|ADL20782.1| Putative signal-transduction protein containing cAMP-binding and
           CBS domains [Corynebacterium pseudotuberculosis 1002]
 gi|308276272|gb|ADO26171.1| Putative signal-transduction protein containing cAMP-binding and
           CBS domains [Corynebacterium pseudotuberculosis I19]
          Length = 637

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 46/118 (38%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     +  A   + +K      V+   + + GI+T+ D+  +    DL+  +
Sbjct: 157 MTSQPATLHPAESIQSAARTMRDKNV-SSLVIATDESICGIVTDRDLRSKVVADDLDVKI 215

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLLRF 338
            V  +M   P      T    AM ++ +H I  L V D     +  +GIV   DL+R 
Sbjct: 216 PVSTIMTPQPITADTTTPAFEAMMVMAEHGIHHLPVCDAAQPNKPLVGIVSSPDLMRL 273



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 27/70 (38%), Gaps = 2/70 (2%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +  N         + D M   P  +     +  A + +R  N+S L V+   +   GIV 
Sbjct: 140 VRNNDGSQSLRAQLGDFMTSQPATLHPAESIQSAARTMRDKNVSSL-VIATDESICGIVT 198

Query: 332 FLDLLRFGII 341
             DL R  ++
Sbjct: 199 DRDL-RSKVV 207



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 16/67 (23%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
             P  +A+ +++E     + V D     + L GI++  D+ R    D             
Sbjct: 231 TTPAFEAMMVMAEHGIHHLPVCDAAQPNKPLVGIVSSPDLMRLLRND------------- 277

Query: 293 PKVILED 299
           P  I  D
Sbjct: 278 PIYITAD 284


>gi|297617946|ref|YP_003703105.1| hypothetical protein Slip_1785 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145783|gb|ADI02540.1| CBS domain containing membrane protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 149

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/140 (24%), Positives = 59/140 (42%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V+    + +   IL++ R   V VVD+  KL G++TE D+             
Sbjct: 7   MTKEVITVRPEQSVEEVAKILADNRISGVPVVDDAGKLVGVVTESDLMIKARDLELPFYI 66

Query: 274 ------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       R F+++L   +   V+D+M      + EDT L    +L+   +I+ + 
Sbjct: 67  TLFDSIIFLQSPRRFNEELKRFTASKVKDIMTTQVAAVDEDTPLFDIARLMTAKSINRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV    K +GIV   D++R 
Sbjct: 127 VV-RDGKVVGIVTRNDVVRA 145



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M K    +  +  +    ++L  + IS + VVDD  K +G+V   DL+
Sbjct: 1   MKAKDIMTKEVITVRPEQSVEEVAKILADNRISGVPVVDDAGKLVGVVTESDLM 54



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V    PL D   +++ K    V VV    K+ GI+T  D+ R   +
Sbjct: 104 VDEDTPLFDIARLMTAKSINRVPVV-RDGKVVGIVTRNDVVRALAR 148


>gi|229195046|ref|ZP_04321821.1| CBS domain protein [Bacillus cereus m1293]
 gi|228588275|gb|EEK46318.1| CBS domain protein [Bacillus cereus m1293]
          Length = 147

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 57/126 (45%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +     + S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIQMTRVRDLMSTHIVRCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM KN   +  D  +  A +L+ Q+ I  L VV +  + +G+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTKNIVSVSPDDPIEKATELMAQYQIRRLPVV-ESGQLVGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++    V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+ 
Sbjct: 5   EEIQMTRVRDLMSTHIVRCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVV 63

Query: 338 FGI 340
            GI
Sbjct: 64  RGI 66


>gi|91773681|ref|YP_566373.1| peptidase M50 [Methanococcoides burtonii DSM 6242]
 gi|91712696|gb|ABE52623.1| M50 peptidase with CBS domain pair [Methanococcoides burtonii DSM
           6242]
          Length = 366

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 55/148 (37%), Gaps = 6/148 (4%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           + IA+      S  D         +                +  V+    + +    + E
Sbjct: 217 IFIAIFVYMGASGED-----RSTAVTMTLEKIPVKDVMSKDVIFVEPSMTIDELTQFMFE 271

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           K+     V+ E   LKGIIT  D+ R    +  ++ V D M  +   I  +     A +L
Sbjct: 272 KKHMGYPVM-ERNTLKGIITFTDVRRVMSLERYSVLVSDAMTHDVVTIPLEANAADAFKL 330

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  + I  ++V+D+     GI+   DL+
Sbjct: 331 MSFNKIGRVLVIDEGGSVTGILSRTDLM 358



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  +     L    V  SD M     +  + +     DA  ++S  + G V V+DEG  +
Sbjct: 291 FTDVRRVMSLERYSVLVSDAM--THDVVTIPLEANAADAFKLMSFNKIGRVLVIDEGGSV 348

Query: 264 KGIITEGDIFRNF 276
            GI++  D+    
Sbjct: 349 TGILSRTDLMHTM 361


>gi|99081065|ref|YP_613219.1| inosine-5'-monophosphate dehydrogenase [Ruegeria sp. TM1040]
 gi|99037345|gb|ABF63957.1| inosine-5'-monophosphate dehydrogenase [Ruegeria sp. TM1040]
          Length = 482

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AI + ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTESRMAITMAQAGG-----MGVIHKNLDIEEQARQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  +    R     VVD+  ++ GI+T  D+        +   V  +
Sbjct: 94  NPITLRADQTLADAKALQERYRVTGFPVVDDSGRVVGIVTNRDMRFASD---DKTPVSVM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M   N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 151 MTSDNLAMLQEPAERDEAISLMKARRIEKLLVTDKDGKLTGLLTLKD 197



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVDD  + +GIV   D+
Sbjct: 94  NPITLRADQTLADAKALQERYRVTGFPVVDDSGRVVGIVTNRDM 137


>gi|332092965|gb|EGI98031.1| helix-turn-helix domain, rpiR family protein [Shigella boydii
           3594-74]
          Length = 284

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 90  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 146

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+   +  AR+
Sbjct: 147 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARK 206

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 207 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 263


>gi|293410828|ref|ZP_06654404.1| conserved hypothetical protein [Escherichia coli B354]
 gi|291471296|gb|EFF13780.1| conserved hypothetical protein [Escherichia coli B354]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|229593000|ref|YP_002875119.1| hypothetical protein PFLU5625 [Pseudomonas fluorescens SBW25]
 gi|229364866|emb|CAY52926.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 644

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
           +           PL DA+T++ E++ G + +VDE +   GI T  D+ +      +  S 
Sbjct: 183 AMRHPVTCSPSTPLRDAVTLMHEQQVGSIVIVDEHKAPLGIFTLRDLRQVVADGASDFSQ 242

Query: 285 -VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++  M + P  +  D     A   + + +I+ + +V   Q+  G+V   DL
Sbjct: 243 AIDGHMTQAPFFLTPDHSAFDAAIAMTERHIAHVCLV-KDQRLCGVVSERDL 293



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P      T L  A+ L+ +  +  +++VD+ +  +GI    DL
Sbjct: 176 NTRLGELAMRHPVTCSPSTPLRDAVTLMHEQQVGSIVIVDEHKAPLGIFTLRDL 229



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                 G      +   H   +   +       DA   ++E+    V +V + Q+L G++
Sbjct: 230 RQVVADGASDFSQAIDGHMTQAPFFLTPDHSAFDAAIAMTERHIAHVCLV-KDQRLCGVV 288

Query: 268 TEGDI 272
           +E D+
Sbjct: 289 SERDL 293


>gi|297583021|ref|YP_003698801.1| CBS domain-containing membrane protein [Bacillus selenitireducens
           MLS10]
 gi|297141478|gb|ADH98235.1| CBS domain containing membrane protein [Bacillus selenitireducens
           MLS10]
          Length = 154

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 50/139 (35%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
                  +K    + D   +L +  F  V VVD+   L+G+++EGDI +           
Sbjct: 8   MTKEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIKRASHIQSPAVL 67

Query: 278 -------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              K   +L++ D+M         D  +      +   NI    
Sbjct: 68  EFLGGLIYLDSPKKYMEELKQAMSLTIGDLMKTEVITAHPDDSIEQIATKMLSKNIKRFP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVD+  K IGI+   D+++
Sbjct: 128 VVDEEGKVIGIISRRDIMK 146



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 30/55 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            SV+DVM K    I  DT +    +LL QH+ S + VVDD     G+V   D+++
Sbjct: 2   ASVKDVMTKEAVTIKPDTSVEDTAKLLLQHHFSGVPVVDDEGVLQGVVSEGDIIK 56



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                +    T +  K      VVDE  K+ GII+  DI ++ 
Sbjct: 106 HPDDSIEQIATKMLSKNIKRFPVVDEEGKVIGIISRRDIMKHL 148


>gi|289582176|ref|YP_003480642.1| signal transduction protein with CBS domains [Natrialba magadii
           ATCC 43099]
 gi|289531729|gb|ADD06080.1| putative signal transduction protein with CBS domains [Natrialba
           magadii ATCC 43099]
          Length = 143

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 44/112 (39%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
              S+  V+    +  A  ++ E   G V VVD    L GI+T  D      +       
Sbjct: 10  MSTSLHTVRQDTLVETAGQVMRENDIGSVIVVDSDNHLAGILTTTDFVDIVAQSQPKAET 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VE  M +N         +  A   + +H    L VVD+ +  IGIV   DL
Sbjct: 70  TVERYMTENVVTAAAQDSVRDAAATMLEHGCHHLPVVDEDEGVIGIVTTTDL 121



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  +M  +   + +DTL+  A Q++R+++I  ++VVD      GI+   D +
Sbjct: 6   VGRIMSTSLHTVRQDTLVETAGQVMRENDIGSVIVVDSDNHLAGILTTTDFV 57



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + DA   + E     + VVDE + + GI+T  D+     + 
Sbjct: 84  AQDSVRDAAATMLEHGCHHLPVVDEDEGVIGIVTTTDLASYLSRG 128


>gi|209549446|ref|YP_002281363.1| signal transduction protein with CBS domains [Rhizobium
           leguminosarum bv. trifolii WSM2304]
 gi|209535202|gb|ACI55137.1| putative signal transduction protein with CBS domains [Rhizobium
           leguminosarum bv. trifolii WSM2304]
          Length = 144

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIK 291
               + +A  ILS+KR G + VV    ++ G+ TE D+        KD    ++  VM  
Sbjct: 21  PNTTVAEAAVILSKKRIGAIVVVGMENRISGMFTERDLVHAIAKHGKDGLDQTLAQVMTA 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 E+T +   M+L+       + V +   K +GI+   D+++  I
Sbjct: 81  KVYRCHEETTVNELMELMTSRRFRHVPV-EHNGKLVGIISIGDVVKSRI 128



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVFTAGPNTTVAEAAVILSKKRIGAIVVVGMENRISGMFTERDLVHA 61


>gi|115380677|ref|ZP_01467601.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
 gi|115362317|gb|EAU61628.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 344

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 15/184 (8%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           ++      L L     S        + + + +A    + +     +N +     +     
Sbjct: 67  LSTRLTRQLRLHIPLLSAAMDTVTESRSAIAMAQEGGIGV---IHKNMTPEQQAL----- 118

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +                ++ G PL  A+ ++       V V  +G++L GI+T  D
Sbjct: 119 ---EVLKVKKFESGMVVDPVTIEPGAPLARALELMRHHGVSGVPVT-QGRRLVGIVTSRD 174

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   F  +L T  VE VM +      E      A  LL QH I  L++V++  +  G++ 
Sbjct: 175 VR--FETNL-TQKVEQVMTRKLITGREGITQPEAQALLHQHRIEKLLIVNEEFELKGLIT 231

Query: 332 FLDL 335
             D+
Sbjct: 232 IKDI 235


>gi|27380662|ref|NP_772191.1| hypothetical protein bll5551 [Bradyrhizobium japonicum USDA 110]
 gi|27353827|dbj|BAC50816.1| bll5551 [Bradyrhizobium japonicum USDA 110]
          Length = 142

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 6/127 (4%)

Query: 218 VCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +    ++++     + V+    L  AI +L EK+ G V V++   +L+GI++E DI R  
Sbjct: 1   MTVRSILNTKGHQIMSVEPDAKLAAAIKLLGEKKIGAVLVMN-QSRLEGILSERDIVRVI 59

Query: 277 HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +         V  VM +      E   +   M+ +       L V+D+  K +G++   
Sbjct: 60  GERGAGALDEPVSQVMTRKVVTCKETDTVAELMETMTTGKFRHLPVIDN-GKVVGLISIG 118

Query: 334 DLLRFGI 340
           D+++  +
Sbjct: 119 DIVKRRV 125


>gi|15921694|ref|NP_377363.1| hypothetical protein ST1405 [Sulfolobus tokodaii str. 7]
 gi|15622481|dbj|BAB66472.1| 300aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 300

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K    L +A  I  ++      V+D   K  GI+T  DI + F +      V + M  N 
Sbjct: 186 KPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGILTTADIIKAFFEGKYDAKVSEYMKSNV 245

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
             I ++  +  A++ +  +N+  L+V +  QK IGIV   D+L+   G+
Sbjct: 246 ISIRDEDDILTAIKKMLIYNVGRLLVYNQDQKVIGIVTRTDILKTIAGL 294



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ R     +  + ++ ++ K    +  D  L  A Q+  +  I    V+D+  K +GI+
Sbjct: 162 DVTRMIS--IPKVQIKSLISKKLVALKPDMTLKEASQIFYKEGIRGAPVLDNEGKTLGIL 219

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 220 TTADIIKA 227


>gi|307544219|ref|YP_003896698.1| inosine-5'-monophosphate dehydrogenase [Halomonas elongata DSM
           2581]
 gi|307216243|emb|CBV41513.1| inosine-5'-monophosphate dehydrogenase [Halomonas elongata DSM
           2581]
          Length = 489

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/172 (24%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKSMTIAQQAAEVRKVKKHESVIVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D + +  E  F    VV EG+ L GI+TE D+   F  +    SV D+
Sbjct: 96  DPVTVGPKAKLADLLAMAKEYGFSGFPVV-EGETLVGIVTERDMR--FQPNHGD-SVADI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E T L+V    +++H +  ++VVD+  +  G+V F D+ + 
Sbjct: 152 MTPREKLVTVAEGTELSVIKGKMQEHRVEKMLVVDNDFRLRGLVTFQDIEKA 203


>gi|300940329|ref|ZP_07154925.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300454893|gb|EFK18386.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEAISKAP-LIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|229028522|ref|ZP_04184639.1| CBS domain protein [Bacillus cereus AH1271]
 gi|228732740|gb|EEL83605.1| CBS domain protein [Bacillus cereus AH1271]
          Length = 147

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 6/127 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K  T      DVM +            + +A   + E+  G + VV E +++ G++T+ 
Sbjct: 3   KKEETKMTRVRDVMSTHVVHC--TPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDR 59

Query: 271 DI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+       K   +  + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G
Sbjct: 60  DLVIRGIAEKHPGSNKITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-EGGQLVG 118

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 119 MLALGDL 125



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDVMSTHVVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVIRGI 66


>gi|82544887|ref|YP_408834.1| hypothetical protein SBO_2452 [Shigella boydii Sb227]
 gi|123559059|sp|Q31Y52|MURR_SHIBS RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|81246298|gb|ABB67006.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|320185119|gb|EFW59899.1| Sialic acid utilization regulator, RpiR family [Shigella flexneri
           CDC 796-83]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+   +  AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCVEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|331270537|ref|YP_004397029.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium botulinum BKT015925]
 gi|329127087|gb|AEB77032.1| Glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium botulinum BKT015925]
          Length = 378

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 52/94 (55%), Gaps = 1/94 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ A  I+ E+    + VVD+   L GI+T  DI RN  ++ + + ++++M  +   I 
Sbjct: 266 TVLQAAEIMHERHVDSILVVDKTNTLIGIVTLKDIRRN-RENYSKVMLKEIMETDVVCIH 324

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +D  +   ++++   N+  + VVDD +K +G++ 
Sbjct: 325 KDKTIVDILEVMNVKNVGYIPVVDDGKKLLGLIT 358



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ED++I++P   +    +  A +++ + ++  ++VVD     IGIV   D+ R
Sbjct: 249 KAEDIIIEDPVKAVATRTVLQAAEIMHERHVDSILVVDKTNTLIGIVTLKDIRR 302



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           +    +            +  +     ++D + +++ K  G + VVD+G+KL G+IT
Sbjct: 302 RNRENYSKVMLKEIMETDVVCIHKDKTIVDILEVMNVKNVGYIPVVDDGKKLLGLIT 358


>gi|283795485|ref|ZP_06344638.1| inosine-5'-monophosphate dehydrogenase [Clostridium sp. M62/1]
 gi|291077150|gb|EFE14514.1| inosine-5'-monophosphate dehydrogenase [Clostridium sp. M62/1]
 gi|295091169|emb|CBK77276.1| inosine-5'-monophosphate dehydrogenase [Clostridium cf.
           saccharolyticum K10]
          Length = 483

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIKEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG+KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMGKFRISGVPIT-EGRKLVGIITNRDLK--FEEDYSK-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N     E   +  A ++L +  +  L +VDD     G++   D+
Sbjct: 152 MTSENLVTAKEGITMLEAKKILAKARVEKLPIVDDDFNLKGLITIKDI 199


>gi|194288786|ref|YP_002004693.1| hypothetical protein RALTA_A0643 [Cupriavidus taiwanensis LMG
           19424]
 gi|193222621|emb|CAQ68624.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
           domain; putative TRANSMEMBRANE PROTEIN [Cupriavidus
           taiwanensis LMG 19424]
          Length = 378

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/218 (19%), Positives = 73/218 (33%), Gaps = 16/218 (7%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           F+  L+ + +   + ++             +     L PT    +  A  DA   AL   
Sbjct: 160 FNSMLMLMMALAFNNLSRRRYPHRPPEPAVQHGTKDLPPTQRVGVTRADLDA---ALKVR 216

Query: 197 RNF------SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
             F            V          F            +  V    P  +A  +LS  R
Sbjct: 217 GEFLDIEEDDLEQILVAAQLRAYRRHFGNVLCGEIMSRDVITVTPDQPAHEAGHLLSRHR 276

Query: 251 FGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
              + VVD  +KL GI+T+ D F   R+        +V ++M         +  +    Q
Sbjct: 277 IKALPVVDATRKLVGIVTQSDFFAAQRDTGARRLAGTVRNLMTHAVVTARPEQPMVELAQ 336

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLD----LLRFGII 341
                 +    V+DD ++ +G+V   D    LL+ G++
Sbjct: 337 AFSDGGLHHAPVIDDQRRVVGMVTQSDLVAALLKSGVM 374


>gi|28867701|ref|NP_790320.1| nucleotidyltransferase [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|28850936|gb|AAO54015.1| nucleotidyltransferase, putative [Pseudomonas syringae pv. tomato
           str. DC3000]
          Length = 622

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 161 AMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 220

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 221 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 271



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 154 NTRLGELAMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 210


>gi|197303744|ref|ZP_03168781.1| hypothetical protein RUMLAC_02473 [Ruminococcus lactaris ATCC
           29176]
 gi|197297264|gb|EDY31827.1| hypothetical protein RUMLAC_02473 [Ruminococcus lactaris ATCC
           29176]
          Length = 484

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFFLSPEHTLEDANDLMAKFRISGVPIT-EGRKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 153 TSEGLVTAKEGITLEEAKKILAKARKEKLPIVDDEGNLKGLITIKDI 199


>gi|213967757|ref|ZP_03395904.1| nucleotidyltransferase [Pseudomonas syringae pv. tomato T1]
 gi|213927533|gb|EEB61081.1| nucleotidyltransferase [Pseudomonas syringae pv. tomato T1]
          Length = 622

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 161 AMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 220

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 221 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 271



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 154 NTRLGELAMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 210


>gi|312963466|ref|ZP_07777948.1| cyclic nucleotide-binding (cNMP-BD) protein [Pseudomonas
           fluorescens WH6]
 gi|311282272|gb|EFQ60871.1| cyclic nucleotide-binding (cNMP-BD) protein [Pseudomonas
           fluorescens WH6]
          Length = 653

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +           PL +A+T++ E++ G + +VDE +   GI T  D+ +      +    
Sbjct: 192 AMRHPVTCNPDTPLREAVTLMHEQQVGSIVIVDEHKAPLGIFTLRDLRQVVADGTSDFSQ 251

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++  M + P  +  D     A   + + +I+ + +V   Q+  G+V   DL
Sbjct: 252 PIDAHMTQAPFFLTPDHSAFDAAIAMTERHIAHVCLV-RDQRLCGVVSERDL 302



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P     DT L  A+ L+ +  +  +++VD+ +  +GI    DL
Sbjct: 185 NTRLGELAMRHPVTCNPDTPLREAVTLMHEQQVGSIVIVDEHKAPLGIFTLRDL 238



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 33/113 (29%), Gaps = 1/113 (0%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L +       P         +M      ++ I               L      GT    
Sbjct: 191 LAMRHPVTCNPDTPLREAVTLMHEQQVGSIVIVDEHKAPLGIFTLRDLRQVVADGTSDFS 250

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                H   +   +       DA   ++E+    V +V +  +L G+++E D+
Sbjct: 251 QPIDAHMTQAPFFLTPDHSAFDAAIAMTERHIAHVCLVRDQ-RLCGVVSERDL 302


>gi|310825678|ref|YP_003958035.1| transcriptional regulator [Eubacterium limosum KIST612]
 gi|308737412|gb|ADO35072.1| transcriptional regulator [Eubacterium limosum KIST612]
          Length = 287

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 42/169 (24%), Positives = 67/169 (39%), Gaps = 6/169 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + I      ++ LE +L  +   +F   +E + A K RV+  G+G S  I         
Sbjct: 104 KKVIKHNVTAINDLEQTLSEDTIAEF---LEFLAASK-RVLFFGVGASASISQDALHKFG 159

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           + G            +      T DDL I +S +G S E+   +  AR+    +I++TS 
Sbjct: 160 NIGINVCSHPDPHQMNIICAHSTPDDLFIAVSHTGESQEVLNAVSIARKNGSKIISLTSY 219

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             S +A  +D+ L          +      S I+QL I D L IA    
Sbjct: 220 ANSSLAKMSDLYLLSS--TNDKKYHSEAMASRIVQLTIIDILYIATFMQ 266


>gi|288956922|ref|YP_003447263.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
 gi|288909230|dbj|BAI70719.1| hypothetical protein AZL_000810 [Azospirillum sp. B510]
          Length = 153

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 7/106 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMI 290
             G  + DA T+++E+R   V V  EG+ LKGI+TE D+  R     L+  T  +  VM 
Sbjct: 20  PPGATVRDAATLMAERRIAAVLVT-EGRALKGIVTERDMTTRVVAAGLDPETTPLSSVMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDL 335
            +P  +        A+ L+ + +   L V VD   + +G+V   DL
Sbjct: 79  ADPDTLEPSATALAALDLMERRHYRHLPVAVD--GEVVGMVSIRDL 122


>gi|225574897|ref|ZP_03783507.1| hypothetical protein RUMHYD_02975 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037865|gb|EEG48111.1| hypothetical protein RUMHYD_02975 [Blautia hydrogenotrophica DSM
           10507]
          Length = 484

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFFLSPEHTLKDANDLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 153 TSEGLITAKEGITLEEAKKILAKARKEKLPIVDDEYNLKGLITIKDI 199


>gi|145591209|ref|YP_001153211.1| signal transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282977|gb|ABP50559.1| putative signal transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 139

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-KDLNTLSVEDVM 289
           +     + +A  ++++ R G + +VD+    K  G+I+E DI R    K   T +V+ V 
Sbjct: 14  ITPDKTIEEAAALMAQHRVGLLVIVDKENPKKPIGVISERDIIRGIAQKTPLTATVDKVG 73

Query: 290 I-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             +N   + +   +T A + +RQHN+  ++VVD      G++   DL+   
Sbjct: 74  TMRNFVYVYDYDPITAAARKMRQHNVRHVVVVDKEGNLYGVISIRDLIGEK 124



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLR 337
            ++  K    I  D  +  A  L+ QH + +L++VD     K IG++   D++R
Sbjct: 4   GEIAKKPAVAITPDKTIEEAAALMAQHRVGLLVIVDKENPKKPIGVISERDIIR 57


>gi|170719459|ref|YP_001747147.1| CBS domain-containing protein [Pseudomonas putida W619]
 gi|169757462|gb|ACA70778.1| CBS domain containing protein [Pseudomonas putida W619]
          Length = 145

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 51/128 (39%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                          ++  +     ++DA+ +L+EK  G + VV E  ++ GI++E D  
Sbjct: 1   MKNVEQILKTKSQHQTVYTIGPDDSVLDALKMLAEKNVGALPVV-ENNQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VV    + +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVEPKQNLEYCMNLMTNRHLRHLPVV-SNGELLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|218705934|ref|YP_002413453.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UMN026]
 gi|293405870|ref|ZP_06649862.1| HTH-type transcriptional regulator yfeT [Escherichia coli FVEC1412]
 gi|298381619|ref|ZP_06991218.1| HTH-type transcriptional regulator yfeT [Escherichia coli FVEC1302]
 gi|300897208|ref|ZP_07115655.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|263505197|sp|B7N617|MURR_ECOLU RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|218433031|emb|CAR13926.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UMN026]
 gi|291428078|gb|EFF01105.1| HTH-type transcriptional regulator yfeT [Escherichia coli FVEC1412]
 gi|298279061|gb|EFI20575.1| HTH-type transcriptional regulator yfeT [Escherichia coli FVEC1302]
 gi|300359013|gb|EFJ74883.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEAISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|145591771|ref|YP_001153773.1| CBS domain-containing protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283539|gb|ABP51121.1| CBS domain containing protein [Pyrobaculum arsenaticum DSM 13514]
          Length = 280

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 60/129 (46%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG L +     + V     S+  V+   P+ + I++     FG + +VDE  +L GI TE
Sbjct: 71  GGSLYSDIYMKNVVEIGTRSVVSVRPHTPISEVISLFLRHNFGSMPIVDEEGRLVGIFTE 130

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+ +   +      V DVM +   V+   + +   ++ +  +      +V++  K + +
Sbjct: 131 WDVIKLASQLDFPHRVRDVMTRIIYVLTPYSTIMDVLEGITIYKFRRYPIVNEGGKVVAM 190

Query: 330 VHFLDLLRF 338
           +H  D+LR+
Sbjct: 191 LHAKDVLRY 199



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 54/132 (40%), Gaps = 14/132 (10%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +  +   +  V     +++A+  +       + +V  G+KL GIIT  DI    +  
Sbjct: 6   KPVIEFATKEVVTVGEKEKVLNAMRTMVRLDIRRLPIV-RGEKLIGIITMLDILDAIYSW 64

Query: 280 LNTLS-------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           L+  +             V ++  ++   +   T ++  + L  +HN   + +VD+  + 
Sbjct: 65  LSDNTSGGSLYSDIYMKNVVEIGTRSVVSVRPHTPISEVISLFLRHNFGSMPIVDEEGRL 124

Query: 327 IGIVHFLDLLRF 338
           +GI    D+++ 
Sbjct: 125 VGIFTEWDVIKL 136



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/125 (17%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----L 280
               I ++     ++D +  ++  +F    +V+EG K+  ++   D+ R F +D     +
Sbjct: 150 MTRIIYVLTPYSTIMDVLEGITIYKFRRYPIVNEGGKVVAMLHAKDVLRYFAEDDTVEKV 209

Query: 281 NTLSVEDVMI-------KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVH 331
              +VE+V+        K+P         +   ++ + ++++  + VV++     IG+V 
Sbjct: 210 KQGAVEEVVSNYAINIAKSPIFLAKPGDSVMDVIRKMLEYDVGGVPVVNEEGTAVIGMVT 269

Query: 332 FLDLL 336
              L+
Sbjct: 270 EKTLM 274



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V +   K    + E   +  AM+ + + +I  L +V   +K IGI+  LD+L  
Sbjct: 2   DIFDKPVIEFATKEVVTVGEKEKVLNAMRTMVRLDIRRLPIV-RGEKLIGIITMLDILDA 60


>gi|83647517|ref|YP_435952.1| nucleoside-diphosphate-sugar pyrophosphorylase [Hahella chejuensis
           KCTC 2396]
 gi|83635560|gb|ABC31527.1| nucleoside-diphosphate-sugar pyrophosphorylase [Hahella chejuensis
           KCTC 2396]
          Length = 351

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMI 290
           L++    +  AI ++ +       VVDE Q+L G +T+GD+ R        + SV  +M 
Sbjct: 9   LIQPQASIEQAIEVIEKATLRIALVVDEQQRLLGTVTDGDVRRALINHTPLSASVVRIME 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             PKV   +      + ++ +  +  + VVD  ++ +G+   L++ +
Sbjct: 69  SEPKVAEINDSRARILSIMERRKLLHIPVVDSQRRVVGLETLLNIAQ 115


>gi|332654868|ref|ZP_08420610.1| CBS domains protein [Ruminococcaceae bacterium D16]
 gi|332516211|gb|EGJ45819.1| CBS domains protein [Ruminococcaceae bacterium D16]
          Length = 142

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
              S+  ++       A  +LS    G + V  E +KL+G++T+ DI        +D   
Sbjct: 7   MNPSVVTIEPTSSAALAARLLSRHNVGVLPVCGEDRKLRGMVTDRDIVLRCVAAEEDPAQ 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V ++M +    +        A QL+ +  +  L VV +  K +GIV   DL R
Sbjct: 67  TLVREIMTRGCATVSPQDDCRAATQLMARQQVRRLPVV-EGGKLVGIVSLADLAR 120



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M  +   I   +   +A +LL +HN+ VL V  + +K  G+V   D++
Sbjct: 1   MQVKDLMNPSVVTIEPTSSAALAARLLSRHNVGVLPVCGEDRKLRGMVTDRDIV 54


>gi|331697570|ref|YP_004333809.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
 gi|326952259|gb|AEA25956.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
          Length = 284

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-- 282
            +   +  +    P  +A  +L+ +R   + VV  G +L G+I+E D+ R+      T  
Sbjct: 171 MTTGDLVTITEDRPTEEAAALLTGRRLTSIPVVTAGDRLVGVISEADLLRDPLDGRRTGS 230

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +V   M ++P V+  D  L  A  L+ +    +L VV    + +G++   DLL
Sbjct: 231 PRTVGGAMTRDPVVVGPDDELARARALMAERGFRILPVV-QAGRLVGVLSRRDLL 284



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
               +  V+   P+  A   L+E RF  + VVDE  +L G+++  D+ R+  ++      
Sbjct: 9   MTSRVVTVRADAPVTLAEQRLAEFRFSALPVVDERNRLVGMVSVVDLLRHREQNPGDART 68

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-ISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM ++   +  +  + +    +R +  + V+ +VD     +G+V   DL+R
Sbjct: 69  PVESVMTRDIVHMSPNAGVGIVAHRMRTYGELRVIPIVD-RGVLVGVVTRSDLIR 122



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   ++M      +  D  +T+A Q L +   S L VVD+  + +G+V  +DLLR
Sbjct: 3   LRAREIMTSRVVTVRADAPVTLAEQRLAEFRFSALPVVDERNRLVGMVSVVDLLR 57



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 40/140 (28%), Gaps = 37/140 (26%)

Query: 234 KIGCPLIDAITILSEKR-FGCVAVVDEGQKLKGIITEGDI----------FRNFHKDL-- 280
                +      +        + +VD    L G++T  D+           R   + L  
Sbjct: 82  SPNAGVGIVAHRMRTYGELRVIPIVDR-GVLVGVVTRSDLIRPRPTGGPIRRAVRRFLER 140

Query: 281 ----------------------NTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVL 317
                                 +   V   M   +   I ED     A  LL    ++ +
Sbjct: 141 RSEENRPSHTYRAPARPPRSLPDDAPVRAAMTTGDLVTITEDRPTEEAAALLTGRRLTSI 200

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            VV    + +G++   DLLR
Sbjct: 201 PVVTAGDRLVGVISEADLLR 220


>gi|259418936|ref|ZP_05742853.1| CBS domain protein [Silicibacter sp. TrichCH4B]
 gi|259345158|gb|EEW57012.1| CBS domain protein [Silicibacter sp. TrichCH4B]
          Length = 144

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 6/126 (4%)

Query: 218 VCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    ++ S +   +V  +    +  A  +LSE   G V V  +     GI++E DI R 
Sbjct: 1   MLVKSILKSKEISEVVTIRPDATMEAAAQLLSEHGIGTVVVSADNSTPLGILSERDIVRK 60

Query: 276 FHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             K  +      VED M ++     +D++   A+  + +     + VV +    +GI+  
Sbjct: 61  LAKVGSVCLGHKVEDYMTRDVVTCTQDSVAEEALATMTEGRFRHMPVV-EDGALVGIISL 119

Query: 333 LDLLRF 338
            D+++ 
Sbjct: 120 GDVVKA 125


>gi|271966172|ref|YP_003340368.1| signal-transduction protein containing cAMP- binding and CBS
           domains-like protein [Streptosporangium roseum DSM
           43021]
 gi|270509347|gb|ACZ87625.1| signal-transduction protein containing cAMP- binding and CBS
           domains-like protein [Streptosporangium roseum DSM
           43021]
          Length = 219

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 52/124 (41%), Gaps = 19/124 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------------FR 274
           V+   P  + +  +   + G + V+D      G++++ D+                   R
Sbjct: 14  VRPEAPFTEIVEAMRRFKVGALTVIDADDHPIGMVSDDDLLLKETDSTSAGSVFDSRRRR 73

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFL 333
             H     ++  ++M      + +DT++  A +L+ ++ I  L V++    + +G VH  
Sbjct: 74  QEHHKAAGITAREMMTSPAITVTKDTVVRDAARLMHRYRIKQLPVIEPATGRLVGTVHQS 133

Query: 334 DLLR 337
           DLL+
Sbjct: 134 DLLK 137



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V DVM      +  +   T  ++ +R+  +  L V+D     IG+V   DLL
Sbjct: 1   MKVSDVMGTRAVAVRPEAPFTEIVEAMRRFKVGALTVIDADDHPIGMVSDDDLL 54


>gi|154151094|ref|YP_001404712.1| CBS domain-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|153999646|gb|ABS56069.1| CBS domain containing protein [Methanoregula boonei 6A8]
          Length = 378

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 4/121 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +        +  V     L     ++ S K  G   V  E  KL G+IT  D+ R  
Sbjct: 254 HNVTAESTMSSPVTSVTPALSLSKVAEMMLSTKHLGFPVV--EHDKLVGMITLVDVNRIS 311

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D     V D+M ++P  +     +  A++++   NI  + +     + IGIV   D+L
Sbjct: 312 PADREAKQVRDIMTRDPVTLPPSAPVMDALRIMSARNIGRIPIA-QDGRIIGIVTRSDIL 370

Query: 337 R 337
           +
Sbjct: 371 K 371


>gi|124383325|ref|YP_001027207.1| RpiR family transcriptional regulator [Burkholderia mallei NCTC
           10229]
 gi|124291345|gb|ABN00614.1| transcriptional regulator, RpiR family [Burkholderia mallei NCTC
           10229]
          Length = 339

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 106 RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 164

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 165 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 223

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 224 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 264


>gi|91786652|ref|YP_547604.1| RpiR family transcriptional regulator [Polaromonas sp. JS666]
 gi|91695877|gb|ABE42706.1| transcriptional regulator, RpiR family [Polaromonas sp. JS666]
          Length = 281

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 55/164 (33%), Gaps = 6/164 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKG---RVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +++         S     A + + A      R+   G+G SG +           G  S 
Sbjct: 101 VAAFLKYRNDASSLAIEKAADALLATYNTGKRIEFFGVGNSGIVAQDAQHKFFRLGITSI 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        ++   D ++V+S SG + +L      AR+     I IT    S +A 
Sbjct: 161 AYSDGHMQVMSASLLGPGDCVVVISNSGRTRDLMDACDIARKNGATTIVITV-TGSPLAA 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +I L          +  +P  S +M L I D LA  +     
Sbjct: 220 AGNIHLAADHPEGYDRY--SPMVSRLMHLMIIDILATCVALRIG 261


>gi|288871696|ref|ZP_06118641.2| inosine-5'-monophosphate dehydrogenase [Clostridium hathewayi DSM
           13479]
 gi|288862389|gb|EFC94687.1| inosine-5'-monophosphate dehydrogenase [Clostridium hathewayi DSM
           13479]
          Length = 303

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 17/185 (9%)

Query: 155 HADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P     K  E   H   P  SAIMQ    D LA+AL +     F      V 
Sbjct: 58  PAEVNLRTPLVRFKKGEEPALHINIPMVSAIMQSVSDDRLAVALAQEGGLSFIYGSQTVA 117

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLK 264
                +  +    +  + S  +   V     L D +++        +AV D+G    +L 
Sbjct: 118 EQAAMVNRVKRYRAGFVVSDSN---VSPEMTLEDVLSLTERTGHSTIAVTDDGGPGGRLL 174

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D      +      V++ M +  +     EDT L  A  ++ +H I+ L +V+ 
Sbjct: 175 GIVTNKDYR--VSRMTPDTKVKEFMTQIGDLVYADEDTTLKEANDIIWEHKINCLPLVNK 232

Query: 323 CQKAI 327
             + +
Sbjct: 233 EGRLV 237


>gi|253996331|ref|YP_003048395.1| inosine-5'-monophosphate dehydrogenase [Methylotenera mobilis JLW8]
 gi|253983010|gb|ACT47868.1| inosine-5'-monophosphate dehydrogenase [Methylotenera mobilis JLW8]
          Length = 486

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 69/169 (40%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +   +     +  +    S V+   +  
Sbjct: 40  NIPLISAAMDTVTEAPLAIALAQEGGLGFIHKNMTAMKQAAHVARVKRFESGVV---NDP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + D + + +  +   + VVD   K+ GI+T  D+   F  +L+   ++++M 
Sbjct: 97  ITIQSHMTVRDVLNLTNTHKISGIPVVD-HGKIVGIVTNRDLR--FETNLDQ-PIKNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E       ++LL QH +  ++VVDD     G++   D+ +
Sbjct: 153 PRDRLVTVKEGATKEDVIRLLHQHRLERVLVVDDADTLKGLITVKDIQK 201


>gi|53725702|ref|YP_103994.1| RpiR family transcriptional regulator [Burkholderia mallei ATCC
           23344]
 gi|67643534|ref|ZP_00442279.1| transcriptional regulator, RpiR family [Burkholderia mallei GB8
           horse 4]
 gi|121600081|ref|YP_991715.1| RpiR family transcriptional regulator [Burkholderia mallei SAVP1]
 gi|126448230|ref|YP_001082159.1| RpiR family transcriptional regulator [Burkholderia mallei NCTC
           10247]
 gi|166998526|ref|ZP_02264384.1| transcriptional regulator, RpiR family [Burkholderia mallei PRL-20]
 gi|254178870|ref|ZP_04885524.1| transcriptional regulator, RpiR family [Burkholderia mallei ATCC
           10399]
 gi|254202714|ref|ZP_04909077.1| transcriptional regulator, RpiR family [Burkholderia mallei FMH]
 gi|254208054|ref|ZP_04914404.1| transcriptional regulator, RpiR family [Burkholderia mallei JHU]
 gi|52429125|gb|AAU49718.1| transcriptional regulator, RpiR family [Burkholderia mallei ATCC
           23344]
 gi|121228891|gb|ABM51409.1| transcriptional regulator, RpiR family [Burkholderia mallei SAVP1]
 gi|126241100|gb|ABO04193.1| transcriptional regulator, RpiR family [Burkholderia mallei NCTC
           10247]
 gi|147746961|gb|EDK54038.1| transcriptional regulator, RpiR family [Burkholderia mallei FMH]
 gi|147751948|gb|EDK59015.1| transcriptional regulator, RpiR family [Burkholderia mallei JHU]
 gi|160694784|gb|EDP84792.1| transcriptional regulator, RpiR family [Burkholderia mallei ATCC
           10399]
 gi|238524901|gb|EEP88331.1| transcriptional regulator, RpiR family [Burkholderia mallei GB8
           horse 4]
 gi|243065211|gb|EES47397.1| transcriptional regulator, RpiR family [Burkholderia mallei PRL-20]
          Length = 332

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|134293948|ref|YP_001117684.1| signal-transduction protein [Burkholderia vietnamiensis G4]
 gi|134137105|gb|ABO58219.1| putative signal-transduction protein with CBS domains [Burkholderia
           vietnamiensis G4]
          Length = 153

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           SG +I  V     + DA+ +++EK  G + V+ EG ++ GI+TE D  R      +    
Sbjct: 15  SGRTIYTVTKADFVYDAVKLMAEKGIGALLVM-EGDEIAGIVTERDYARKVVLQDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V+++M    + +         M L+ +H +  L V+D   K IG++   DL++
Sbjct: 74  TRVDEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVK 127



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+                         +  V+      + + +++E R   + V+D 
Sbjct: 56  TERDYA--RKVVLQDRSSKATRVDEIMTSKVRYVEPSQSSDECMALMTEHRMRHLPVLD- 112

Query: 260 GQKLKGIITEGDIFRNFHKD 279
           G KL G+I+ GD+ ++   D
Sbjct: 113 GGKLIGLISIGDLVKSVIAD 132


>gi|226490863|ref|NP_001150216.1| CBS domain protein [Zea mays]
 gi|194708182|gb|ACF88175.1| unknown [Zea mays]
 gi|195613652|gb|ACG28656.1| CBS domain protein [Zea mays]
 gi|195637616|gb|ACG38276.1| CBS domain protein [Zea mays]
          Length = 205

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   + + + GI+TE D  R      +   +  V 
Sbjct: 73  WCTTEDSVYDAVKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+ ++ +  + V+D      G+V   D++R 
Sbjct: 133 DIMTEENKLITVNPDTKVLQAMQLMTENRVRHIPVIDGTGML-GMVSIGDVVRA 185



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 17/104 (16%), Positives = 44/104 (42%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  + +   ++++     +E D+          +      D+M   + +  
Sbjct: 84  VKSMTQHNVGALVVVKPGQNKSIAGIVTERDYLRKIIVQGRSSKSTKVGDIMTEENKLIT 143

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     ++ A+ +++E R   + V+D    L G+++ GD+ R  
Sbjct: 144 VNPDTKVLQAMQLMTENRVRHIPVIDGTGML-GMVSIGDVVRAV 186


>gi|32477176|ref|NP_870170.1| inosine-5-monophosphate dehydrogenase [Rhodopirellula baltica SH 1]
 gi|32447727|emb|CAD77245.1| Inosine-5-monophosphate dehydrogenase [Rhodopirellula baltica SH 1]
          Length = 539

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL +          ++H    +         V  S + I +
Sbjct: 88  QIPLISSPMDTVTESEMAIALAKEGGLG-----IVHKNLSVRRQTEEVLKVKRSANGIIV 142

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     +  A  ++       + +V++ + L GI+T  D+      D+    +  V
Sbjct: 143 NPVTLNPAQKVSAAAELMDRANVSGIPIVEDDRTLAGILTRRDLRFLEDPDM---PISQV 199

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N    + +  L  A ++L +  +  L+++D+ +K  G++   D+
Sbjct: 200 MTRENLVTAVGNVTLAQAEKILTEKRVEKLLLIDEERKLTGLITIRDI 247


>gi|109898836|ref|YP_662091.1| signal transduction protein [Pseudoalteromonas atlantica T6c]
 gi|109701117|gb|ABG41037.1| putative signal transduction protein with CBS domains
           [Pseudoalteromonas atlantica T6c]
          Length = 143

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------KDLN- 281
           + +   L     +    RF  + VVD+  +L GII++ D+ +             KDL  
Sbjct: 14  INMDDTLAHVRVLFEHHRFHHLLVVDK-GQLVGIISDRDLLKAISPAVGTASETSKDLAY 72

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +M ++P  +   + L  A++   +++IS L +V+   K IGI+ + D+ +F
Sbjct: 73  LKKPAHQIMTRDPVCLSPKSGLLEAIKAFNRYSISCLPIVNINNKPIGILSWRDIFKF 130



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+ +M      I  D  L     L   H    L+VVD   + +GI+   DLL+ 
Sbjct: 1   MQVDKLMSVEVVSINMDDTLAHVRVLFEHHRFHHLLVVDK-GQLVGIISDRDLLKA 55


>gi|157157722|ref|YP_001463756.1| RpiR family transcriptional regulator [Escherichia coli E24377A]
 gi|193071206|ref|ZP_03052128.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|209919908|ref|YP_002293992.1| hypothetical protein ECSE_2717 [Escherichia coli SE11]
 gi|218554959|ref|YP_002387872.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI1]
 gi|293446788|ref|ZP_06663210.1| HTH-type transcriptional regulator yfeT [Escherichia coli B088]
 gi|300820905|ref|ZP_07101055.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300903157|ref|ZP_07121090.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|301306266|ref|ZP_07212339.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|331669169|ref|ZP_08370017.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|263504556|sp|A7ZPM7|MURR_ECO24 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504708|sp|B6I503|MURR_ECOSE RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263505178|sp|B7M6T6|MURR_ECO8A RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|157079752|gb|ABV19460.1| transcriptional regulator, RpiR family [Escherichia coli E24377A]
 gi|192955477|gb|EDV85958.1| transcriptional regulator, RpiR family [Escherichia coli E110019]
 gi|209913167|dbj|BAG78241.1| conserved hypothetical protein [Escherichia coli SE11]
 gi|218361727|emb|CAQ99324.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI1]
 gi|291323618|gb|EFE63046.1| HTH-type transcriptional regulator yfeT [Escherichia coli B088]
 gi|300404823|gb|EFJ88361.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300526658|gb|EFK47727.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300838509|gb|EFK66269.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|315256443|gb|EFU36411.1| transcriptional regulator, RpiR family [Escherichia coli MS 85-1]
 gi|323170311|gb|EFZ55964.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           LT-68]
 gi|323944650|gb|EGB40717.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H120]
 gi|324020106|gb|EGB89325.1| transcriptional regulator, RpiR family [Escherichia coli MS 117-3]
 gi|324118109|gb|EGC12007.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1167]
 gi|331064363|gb|EGI36274.1| putative transcriptional regulator, RpiR family [Escherichia coli
           TA271]
 gi|332344254|gb|AEE57588.1| helix-turn-helix domain, RpiR family protein [Escherichia coli
           UMNK88]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|194335676|ref|YP_002017470.1| Nucleotidyl transferase [Pelodictyon phaeoclathratiforme BU-1]
 gi|194308153|gb|ACF42853.1| Nucleotidyl transferase [Pelodictyon phaeoclathratiforme BU-1]
          Length = 352

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 31/101 (30%), Positives = 56/101 (55%), Gaps = 3/101 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVEDVM 289
            ++ +   L + IT L++     V VV+E  +L+G I++GDI R   + LN +  +E ++
Sbjct: 11  AILPMSASLEEVITNLTKVSIKIVLVVNEAGELQGTISDGDIRRGLLRGLNLISPIESII 70

Query: 290 IKNPKVILEDTLLTVAMQ-LLRQHNISVLMVVDDCQKAIGI 329
             NP V+ E+ L   A++ L+  + I  + VVDD    +G+
Sbjct: 71  HHNPLVVTEE-LGREAVRKLMVVNKIQQVPVVDDQHHIVGL 110


>gi|92117482|ref|YP_577211.1| signal-transduction protein [Nitrobacter hamburgensis X14]
 gi|91800376|gb|ABE62751.1| putative signal-transduction protein with CBS domains [Nitrobacter
           hamburgensis X14]
          Length = 226

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 57/143 (39%), Gaps = 27/143 (18%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------ 274
                    +  V     ++DA  ++ ++R   + VVDE  +L G+++EGD  R      
Sbjct: 2   RAHQIMTRKVTTVTADTSILDAANLMLQQRISGLPVVDETGRLIGVVSEGDFVRRSEIGT 61

Query: 275 ----------------NFHKDL---NTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNI 314
                           N  +D    N   V ++M + +     ED  L   ++L+ + N+
Sbjct: 62  QRPRIRWLEFLMGVAGNVAQDFVRENGRKVWEIMTQDDLCTTTEDMPLADLVRLMERRNV 121

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L VV      IGIV   DLLR
Sbjct: 122 KRLPVV-RGHTVIGIVTRTDLLR 143



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    +  DT +  A  L+ Q  IS L VVD+  + IG+V   D +R
Sbjct: 1   MRAHQIMTRKVTTVTADTSILDAANLMLQQRISGLPVVDETGRLIGVVSEGDFVR 55



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 31/76 (40%), Gaps = 4/76 (5%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    + + D +       PL D + ++  +    + VV  G  + GI+T  D+ R
Sbjct: 85  RENGRKVWEIMTQDDLCTTTEDMPLADLVRLMERRNVKRLPVV-RGHTVIGIVTRTDLLR 143

Query: 275 ---NFHKDLNTLSVED 287
              +F +D+   + +D
Sbjct: 144 SVASFARDVPDPTADD 159


>gi|16130352|ref|NP_416922.1| Repressor for murPQ, MurNAc 6-P inducible [Escherichia coli str.
           K-12 substr. MG1655]
 gi|89109241|ref|AP_003021.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. W3110]
 gi|170082036|ref|YP_001731356.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
           substr. DH10B]
 gi|238901590|ref|YP_002927386.1| putative DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|256021879|ref|ZP_05435744.1| putative DNA-binding transcriptional regulator [Escherichia sp.
           4_1_40B]
 gi|300951872|ref|ZP_07165682.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300957219|ref|ZP_07169454.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|301023783|ref|ZP_07187518.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|307139069|ref|ZP_07498425.1| HTH-type transcriptional regulator murR [Escherichia coli H736]
 gi|2500599|sp|P77245|MURR_ECOLI RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504633|sp|C4ZVV8|MURR_ECOBW RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504638|sp|B1XA98|MURR_ECODH RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|1788767|gb|AAC75480.1| Repressor for murPQ, MurNAc 6-P inducible [Escherichia coli str.
           K-12 substr. MG1655]
 gi|1799856|dbj|BAA16310.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K12 substr. W3110]
 gi|169889871|gb|ACB03578.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. DH10B]
 gi|238862280|gb|ACR64278.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|260448486|gb|ACX38908.1| transcriptional regulator, RpiR family [Escherichia coli DH1]
 gi|299880656|gb|EFI88867.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|300316063|gb|EFJ65847.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300448913|gb|EFK12533.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|309702715|emb|CBJ02044.1| RpiR-family transcriptional regulator [Escherichia coli ETEC
           H10407]
 gi|315137058|dbj|BAJ44217.1| putative DNA-binding transcriptional regulator [Escherichia coli
           DH1]
 gi|315615678|gb|EFU96310.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           3431]
 gi|323936453|gb|EGB32742.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1520]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|254459524|ref|ZP_05072940.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           HTCC2083]
 gi|206676113|gb|EDZ40600.1| inosine-5'-monophosphate dehydrogenase [Rhodobacteraceae bacterium
           HTCC2083]
          Length = 482

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 61/167 (36%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M     + +AI++ ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTENRMAISMAQAGG-----MGVIHRNLDVEEQARQVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +    R     VVD+  ++ GI+T  D+        +   V+ +
Sbjct: 94  NPITLTPDQTLADAKALQERYRVTGFPVVDDKGRVLGIVTNRDMRFASD---DATPVKHM 150

Query: 289 MIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  +   IL++   L  A  L++   I  L+V D   K  G++   D
Sbjct: 151 MTADDLAILQEPAELEEAKSLMKARRIEKLLVTDGTGKLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVDD  + +GIV   D+
Sbjct: 94  NPITLTPDQTLADAKALQERYRVTGFPVVDDKGRVLGIVTNRDM 137


>gi|171058744|ref|YP_001791093.1| inosine-5'-monophosphate dehydrogenase [Leptothrix cholodnii SP-6]
 gi|170776189|gb|ACB34328.1| inosine-5'-monophosphate dehydrogenase [Leptothrix cholodnii SP-6]
          Length = 489

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVH-KNLSPKQQAAEVARVKRYESGLLKDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     +   I +  +       VVDE  ++ GIIT  D+   F   L    V ++M   
Sbjct: 99  VSPNVAVRHVIDLSRQHGISGFPVVDE-GRVVGIITGRDLR--FETRL-DAPVREIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E   L  A  L+ QH +  ++V+++  +  G+    D+ +
Sbjct: 155 ERLVTVREGATLAEAKALMHQHKLERVLVLNEASELRGLFTVKDITK 201


>gi|90579808|ref|ZP_01235616.1| inositol-5-monophosphate dehydrogenase [Vibrio angustum S14]
 gi|90438693|gb|EAS63876.1| inositol-5-monophosphate dehydrogenase [Vibrio angustum S14]
          Length = 487

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI L +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMVSASMDTVTEGRLAIGLAQEGGIGFIHKNMSIEQQANQVRMVKQFEAGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   +  +  F    VV +  +L GIIT  D+   F  DL+  +VE+VM 
Sbjct: 98  VTVKPTATIADVKRLTEQNGFAGYPVVTDNNELVGIITGRDVR--FVTDLSK-TVEEVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     E         +++QH +  +++VDD  +  G++   D  + 
Sbjct: 155 SKTDLASAKEGASREEVEAIMQQHRVEKVLLVDDEFRLKGMITAKDFQKA 204


>gi|21218726|ref|NP_624505.1| hypothetical protein SCO0169 [Streptomyces coelicolor A3(2)]
 gi|5748631|emb|CAB53136.1| conserved hypothetical protein SCJ1.18 [Streptomyces coelicolor
           A3(2)]
          Length = 217

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              +   V    P  D I +L + +   + V++   ++ G+++E D+      R+   D 
Sbjct: 1   MTHTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFRDSDPDR 60

Query: 281 NT-------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T             L+  DVM      +  D  L  A +++ Q  +  L VV+      
Sbjct: 61  FTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVNAEGLLE 120

Query: 328 GIVHFLDLLR 337
           G+V   DLL+
Sbjct: 121 GVVSRADLLK 130



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 39/92 (42%), Gaps = 2/92 (2%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+   + F  +     L       +  + +  ++  V     L  A  I+++++   + V
Sbjct: 54  RDSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVT-VHPDATLAQAARIMAQRKVKRLPV 112

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V+    L+G+++  D+ + F +  +    E+V
Sbjct: 113 VNAEGLLEGVVSRADLLKVFLR-TDDAIAEEV 143


>gi|117926295|ref|YP_866912.1| inosine-5'-monophosphate dehydrogenase [Magnetococcus sp. MC-1]
 gi|117610051|gb|ABK45506.1| inosine-5'-monophosphate dehydrogenase [Magnetococcus sp. MC-1]
          Length = 488

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 36/209 (17%), Positives = 78/209 (37%), Gaps = 17/209 (8%)

Query: 136 RFSIPLIAITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              I  +A+T ++  +V  H++++   + +            P  SA M        AIA
Sbjct: 1   MLRIAKMALTFDDVLLVPDHSNVLPHEVDISTRLTRNIRLNMPLLSAAMDTVTEAGTAIA 60

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK----IGCPLIDAITILSE 248
           + +          ++H    +         V        +         PL  A+ +++ 
Sbjct: 61  MAQEGGIG-----IVHKNLSIKEQADAVRQVKRHISGTVINPWTLGPDEPLKAALELMAR 115

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI--KNPKVILEDTLLTVAM 306
           ++   + +V+   ++ GIIT  D+        ++L + D+M   +    + +   +    
Sbjct: 116 RKVSGIPIVEADGRVAGIITNRDVRFATD---DSLPIRDLMTQGEKLVTVPQGVDMGTVK 172

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L   H I  L++VDD  K  G++   D+
Sbjct: 173 HLFHLHRIEKLLMVDDQYKLTGLITVKDI 201


>gi|330808646|ref|YP_004353108.1| hypothetical protein PSEBR_a1884 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376754|gb|AEA68104.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 146

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     ++ A+  ++EK  G + VV +  ++ GII+E D  R      +    
Sbjct: 14  KNQQVHTISPDDMVLQALMRMAEKNVGALLVV-KNDEVLGIISERDYARKMVLRGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M+     I     +   + ++ + ++  L VV +  K +G++   DL++  I
Sbjct: 73  TKVSDIMVSPVITIDPHQNVETCLSIMTEKHLRHLPVV-EDGKLVGLLSIGDLVKEAI 129


>gi|291549906|emb|CBL26168.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus torques L2-14]
          Length = 484

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFFLSPEHTLEDANDLMAKYRISGVPIT-EGRKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 153 TSEGLVTAKEGITLEDAKKILAKARKEKLPIVDDEGNLKGLITIKDI 199


>gi|218696062|ref|YP_002403729.1| putative DNA-binding transcriptional regulator [Escherichia coli
           55989]
 gi|300817334|ref|ZP_07097551.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|307312574|ref|ZP_07592207.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|309794527|ref|ZP_07688950.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|263504564|sp|B7LCH1|MURR_ECO55 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|218352794|emb|CAU98582.1| putative DNA-binding transcriptional regulator [Escherichia coli
           55989]
 gi|300529960|gb|EFK51022.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|306907497|gb|EFN38001.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|308121983|gb|EFO59245.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|315061751|gb|ADT76078.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           W]
 gi|320199991|gb|EFW74580.1| Sialic acid utilization regulator, RpiR family [Escherichia coli
           EC4100B]
 gi|323184269|gb|EFZ69645.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1357]
 gi|323377668|gb|ADX49936.1| transcriptional regulator, RpiR family [Escherichia coli KO11]
          Length = 285

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCSLFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|167580578|ref|ZP_02373452.1| transcriptional regulator, RpiR family protein [Burkholderia
           thailandensis TXDOH]
          Length = 322

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVADAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|294496516|ref|YP_003543009.1| 3-hexulose-6-phosphate isomerase [Methanohalophilus mahii DSM 5219]
 gi|292667515|gb|ADE37364.1| 3-hexulose-6-phosphate isomerase [Methanohalophilus mahii DSM 5219]
          Length = 200

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 69/195 (35%), Gaps = 25/195 (12%)

Query: 30  SIIAE--KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++  E     + ++   L  E        +E I      + I G G+SG +G   A  L 
Sbjct: 11  TLSMELMADHIKNIAQRLDKE---SIKKTIEYIMDADS-IFIMGAGRSGLVGKAFAMRLM 66

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  S+ V  +         + ++D++I +S SG +  +  +   A+     LI +TS 
Sbjct: 67  HLGFKSYVVGESTTP-----AVHKNDVVIAISGSGETRSVSDLGRIAKDIGATLITVTSN 121

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAP--------------TTSAIMQLAIGDALAIAL 193
             S +   +D  L +    +    G                 T+  I  L   DAL   L
Sbjct: 122 RDSTLGHISDATLEIHGRSKEDAGGYLERHMRGEYSHLTPLGTSFEISSLVFLDALVAEL 181

Query: 194 LESRNFSENDFYVLH 208
           +     SE D    H
Sbjct: 182 IFITGASEADLKSRH 196


>gi|256790295|ref|ZP_05528726.1| hypothetical protein SlivT_37933 [Streptomyces lividans TK24]
 gi|289774171|ref|ZP_06533549.1| conserved hypothetical protein [Streptomyces lividans TK24]
 gi|289704370|gb|EFD71799.1| conserved hypothetical protein [Streptomyces lividans TK24]
          Length = 228

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              +   V    P  D I +L + +   + V++   ++ G+++E D+      R+   D 
Sbjct: 12  MTHTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLLPKEEFRDSDPDR 71

Query: 281 NT-------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T             L+  DVM      +  D  L  A +++ Q  +  L VV+      
Sbjct: 72  FTQMRRLTDLAKAGGLTAADVMTAPAVTVHPDATLAQAARIMAQRKVKRLPVVNAEGLLE 131

Query: 328 GIVHFLDLLR 337
           G+V   DLL+
Sbjct: 132 GVVSRADLLK 141



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM      +  +      + LL Q  +S L V++   + IG+V   DLL
Sbjct: 7   TVNDVMTHTAVAVGPEAPFKDIIALLDQWKVSALPVLEGEGRVIGLVSEADLL 59



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 15/92 (16%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+   + F  +     L       +  + +  ++  V     L  A  I+++++   + V
Sbjct: 65  RDSDPDRFTQMRRLTDLAKAGGLTAADVMTAPAVT-VHPDATLAQAARIMAQRKVKRLPV 123

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V+    L+G+++  D+ + F +  + +  E+V
Sbjct: 124 VNAEGLLEGVVSRADLLKVFLRTADAI-AEEV 154


>gi|134298322|ref|YP_001111818.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
 gi|134051022|gb|ABO48993.1| putative signal-transduction protein with CBS domains
           [Desulfotomaculum reducens MI-1]
          Length = 145

 Score = 81.9 bits (201), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
              +I  V     + +A  ++S+   G + VV E     GI+T+ DI  R   +  N  +
Sbjct: 9   MTQNIATVSPQQSIQEATQLMSQHNVGSIPVV-ENGNCVGIVTDRDIALRAVSQGQNPSS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V+ VM         +  +  A  L+ +  +  L VV +     G+V   DL
Sbjct: 68  TTVQSVMTSGVVTGSPEMDVHEAANLMAERQVRRLPVV-ENGSITGMVALGDL 119



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
              ++++M +N   +     +  A QL+ QHN+  + VV++    +GIV   D+ LR 
Sbjct: 2   AQKLKEIMTQNIATVSPQQSIQEATQLMSQHNVGSIPVVENGN-CVGIVTDRDIALRA 58


>gi|254560087|ref|YP_003067182.1| hypothetical protein METDI1604 [Methylobacterium extorquens DM4]
 gi|254267365|emb|CAX23200.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
           extorquens DM4]
          Length = 143

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+   PL DAI +L+E   G + V+ E + + GII+E DI             L V   M
Sbjct: 17  VRPDDPLADAIHLLTENGIGALVVMGEARTVVGIISERDIMHALAAHGATALDLPVSRQM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +       +T     M+L+ +     + V  +  K +GI+   D++
Sbjct: 77  TRKVVTCRRETTNDEVMRLMTEGRFRHMPVC-ESGKLVGIISIHDVI 122



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  D  L  A+ LL ++ I  L+V+ + +  +GI+   D++  
Sbjct: 15  VTVRPDDPLADAIHLLTENGIGALVVMGEARTVVGIISERDIMHA 59


>gi|188495100|ref|ZP_03002370.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|312973332|ref|ZP_07787504.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1827-70]
 gi|188490299|gb|EDU65402.1| transcriptional regulator, RpiR family [Escherichia coli 53638]
 gi|310331927|gb|EFP99162.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1827-70]
          Length = 285

 Score = 81.9 bits (201), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|212710852|ref|ZP_03318980.1| hypothetical protein PROVALCAL_01920 [Providencia alcalifaciens DSM
           30120]
 gi|212686549|gb|EEB46077.1| hypothetical protein PROVALCAL_01920 [Providencia alcalifaciens DSM
           30120]
          Length = 488

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 63/182 (34%), Gaps = 10/182 (5%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  +      P  SA M       LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTAKIRLNIPMLSAAMDTVTESDLAIALAQEGGIGFIHKNMSIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S V+        V     + +   +     F    VV +   L GIIT  D+   F  
Sbjct: 89  HESGVV---TDPVTVTPETTIREVQELAERNGFAGYPVVSKDNSLVGIITGRDVR--FVT 143

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DL+   V  VM        + E     V +Q + +  +   +V+DD    +G++   D  
Sbjct: 144 DLDQ-PVTAVMTPKERLVTVKEGEAREVVLQKMHEQRVEKALVIDDSFHLLGMITVKDFQ 202

Query: 337 RF 338
           + 
Sbjct: 203 KA 204


>gi|167904275|ref|ZP_02491480.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei NCTC 13177]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|118443180|ref|YP_877860.1| sugar-phosphate nucleotide transferase [Clostridium novyi NT]
 gi|118133636|gb|ABK60680.1| probable sugar-phosphate nucleotide transferase [Clostridium novyi
           NT]
          Length = 348

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
                I  V     + DA+  + +   G V +VD+ +K+ G++T+G+I R   K      
Sbjct: 1   MISMDIYCVSSKATIKDAMEAIDKNLIGAVFIVDDDKKVIGVVTDGNIRRAILKGYKIEE 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           S +D+   N K + + T      + + ++ I  L ++D+  K 
Sbjct: 61  SAKDICNTNFKYVNKLTSKQKVKEEMLKYKIRQLPLLDEEGKL 103



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     +  AM+ + ++ I  + +VDD +K IG+V   ++ R 
Sbjct: 8   CVSSKATIKDAMEAIDKNLIGAVFIVDDDKKVIGVVTDGNIRRA 51


>gi|167721221|ref|ZP_02404457.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei DM98]
 gi|167740195|ref|ZP_02412969.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei 14]
 gi|237813811|ref|YP_002898262.1| HTH-type transcriptional regulator HexR [Burkholderia pseudomallei
           MSHR346]
 gi|254180649|ref|ZP_04887247.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1655]
 gi|184211188|gb|EDU08231.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1655]
 gi|237505839|gb|ACQ98157.1| HTH-type transcriptional regulator HexR [Burkholderia pseudomallei
           MSHR346]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|308069696|ref|YP_003871301.1| hypothetical protein PPE_02938 [Paenibacillus polymyxa E681]
 gi|305858975|gb|ADM70763.1| Conserved hypothetical protein [Paenibacillus polymyxa E681]
          Length = 168

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 46/123 (37%), Gaps = 5/123 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDI-- 272
                           V     + +    + +   G + VV+     KL G++T+ D+  
Sbjct: 25  VPMKKVQEVMTKKCVTVTPQDNIYEIAVKMKDNDTGFIPVVEREGSDKLIGVVTDRDLVV 84

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                K+  + SV+ VM    +    D  +  A +L+ +  I  L V  +  + IGIV  
Sbjct: 85  RGYAAKNSGSGSVDTVMTTGIRTASADMSVDQAAELMAEQQIRRLPVT-EGDRLIGIVSI 143

Query: 333 LDL 335
            DL
Sbjct: 144 GDL 146



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
             V++VM K    +     +      ++ ++   + VV+     K IG+V   DL+
Sbjct: 28  KKVQEVMTKKCVTVTPQDNIYEIAVKMKDNDTGFIPVVEREGSDKLIGVVTDRDLV 83


>gi|269962401|ref|ZP_06176751.1| inositol-5-monophosphate dehydrogenase [Vibrio harveyi 1DA3]
 gi|269832897|gb|EEZ87006.1| inositol-5-monophosphate dehydrogenase [Vibrio harveyi 1DA3]
          Length = 506

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 47/230 (20%), Positives = 87/230 (37%), Gaps = 19/230 (8%)

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHG 172
           I LS+  S+ E+  +L  A+       A+T ++  +V  H+ +      L  +       
Sbjct: 6   IGLSFYSSNCEILQMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLRTQLTKNITL 59

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 60  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---SDP 116

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    V+ E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 117 VTVSPEATIADVVALTEKHGFAGFPVITENNELVGIITGRDVR--FVTDLSK-KVSSVMT 173

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 174 AKENLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 223


>gi|257867258|ref|ZP_05646911.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257873591|ref|ZP_05653244.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC10]
 gi|257801314|gb|EEV30244.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257807755|gb|EEV36577.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC10]
          Length = 283

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/195 (22%), Positives = 80/195 (41%), Gaps = 8/195 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    + F +++   +    ++ +  A +   +    L+  ++ L+ E       A   I
Sbjct: 72  MLMQENDFSAISIHENIQKSDNELTMAQKVFDSNMTTLTDTKNLLKEE---DLKLAAAMI 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K R+   G+G S  + +        +    F          +  ++T DD  I +S 
Sbjct: 129 NQSK-RLFFFGVGGSEIVATDAYHKFLRSPITVFHSSDYHIQLMEASLLTPDDCGIFISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSA 179
           +G S E   +   A+     +I ITS   S +A   D+V +++ +E E     LA   S 
Sbjct: 188 TGKSRETIELAQVAKNNGAKIIVITSHAASPLAKLGDVVFISISEETEFRSEALA---SR 244

Query: 180 IMQLAIGDALAIALL 194
           I QL+I D+L + L+
Sbjct: 245 IAQLSIMDSLYVILM 259


>gi|212634311|ref|YP_002310836.1| inosine 5'-monophosphate dehydrogenase [Shewanella piezotolerans
           WP3]
 gi|212555795|gb|ACJ28249.1| IMP dehydrogenase [Shewanella piezotolerans WP3]
          Length = 490

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    ++
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRKVKIYEAGIVQQPVTV 100

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                   L D + +L+EK  F    VV+E  +L GIIT  D+   F  D +  +V+ VM
Sbjct: 101 T---PTTTLAD-LKVLTEKNGFAGYPVVNEANELVGIITGRDVR--FVTDWSR-TVDQVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L     L+  H +  ++VVDD  K  G++   D  + 
Sbjct: 154 TPKDRLVTVAEGTKLDEVQTLMHSHRVEKVLVVDDNFKLKGLITVKDFQKA 204


>gi|167770652|ref|ZP_02442705.1| hypothetical protein ANACOL_01998 [Anaerotruncus colihominis DSM
           17241]
 gi|167667247|gb|EDS11377.1| hypothetical protein ANACOL_01998 [Anaerotruncus colihominis DSM
           17241]
          Length = 289

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 68/163 (41%), Gaps = 6/163 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
             + +  E+R LS   + L  +   +   AV+ +   + R++  G+G S     K +   
Sbjct: 105 VQKVLQTEQRALSETAALLDVK---ELDRAVDYLSQAR-RIIFFGVGASFTAALKTSHKF 160

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
                    V+ A         ++ +D+ +V S+SGS+ +  A+   A++    ++AIT 
Sbjct: 161 LRIEPKVNCVNDAHTQAMLAATMSAEDVAVVFSYSGSTKDTNAVAELAKKNGAKVVAITR 220

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             KS +    D++L           G A  ++ I Q  + D L
Sbjct: 221 FQKSPLTEFTDVILLCGANEGPLQSGSA--SADISQAFLVDLL 261


>gi|327310846|ref|YP_004337743.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947325|gb|AEA12431.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 141

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 55/106 (51%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           + G  + +A +I++++R G + +V EG +L G+++E DI R     L+       +  ++
Sbjct: 15  EPGITIREAASIMAKRRIGLLVLV-EGGRLYGVVSERDIVRAVAAGLSPERPAALIATRD 73

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I  ++ +  A +L+ +  I  L+VV    +  G+V   D++R 
Sbjct: 74  VVTIDAESDVLEAARLMARRGIRHLVVV-KGGELYGVVSVRDIVRE 118



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V  +  + P        +  A  ++ +  I +L++V +  +  G+V   D++R 
Sbjct: 1   MKVGAIASRPPITAEPGITIREAASIMAKRRIGLLVLV-EGGRLYGVVSERDIVRA 55


>gi|315655909|ref|ZP_07908807.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii ATCC 51333]
 gi|315489973|gb|EFU79600.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii ATCC 51333]
          Length = 212

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
               +   +  G  + DAI ++       + V+    KL G++++ D+ R    D     
Sbjct: 6   RMTANPFTIDSGATVPDAIELMQAHGITKLPVL-HDGKLCGVVSQLDLNRALPSDATSLS 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ L +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++  
Sbjct: 65  FGEVAYLLSKLKIYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITE 123

Query: 333 LDLLRF 338
            D+L  
Sbjct: 124 SDVLDA 129



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G++  L            + P +     L +A  ++ + +   + V+DE  K+ G+ITE 
Sbjct: 66  GEVAYLLSKLKIYKIMQKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITES 124

Query: 271 DIFRNF 276
           D+   F
Sbjct: 125 DVLDAF 130


>gi|229589653|ref|YP_002871772.1| hypothetical protein PFLU2156 [Pseudomonas fluorescens SBW25]
 gi|229361519|emb|CAY48395.1| conserved hypothetical protein [Pseudomonas fluorescens SBW25]
          Length = 146

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 56/119 (47%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTL 283
                +  +K    + +A+  +SEK  G + V+ +   + GII+E D  R    K L+++
Sbjct: 13  QKNQEVHTIKHDHTVFEALVRMSEKNVGALPVI-KEGVVVGIISERDYARKLILKGLSSV 71

Query: 284 S--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  V++VM      +     +   M ++   ++  L VV +  K +G++   DL++  I
Sbjct: 72  TTRVDEVMSSPVITVDSHKKVDECMNIMTDSHLRHLPVV-EDGKLLGLLSIGDLVKEAI 129


>gi|207723028|ref|YP_002253446.1| transcription regulation repressor hexr protein [Ralstonia
           solanacearum MolK2]
 gi|206588217|emb|CAQ18781.1| transcription regulation repressor hexr protein [Ralstonia
           solanacearum MolK2]
          Length = 274

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L++L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 103 RILQDTIDALAALRDRLDPR---ALDAAVALVEAAQ-RIDLYGFGSSGVVARDAQTKFFR 158

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 159 YGIAANAYSDPYLVSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 217

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 218 GSRLAALADVTLPASVEAD 236


>gi|163746275|ref|ZP_02153633.1| inosine-5'-monophosphate dehydrogenase [Oceanibulbus indolifex
           HEL-45]
 gi|161380160|gb|EDQ04571.1| inosine-5'-monophosphate dehydrogenase [Oceanibulbus indolifex
           HEL-45]
          Length = 482

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 65/165 (39%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIAL ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAIALAQAGGMGVVHRNLTVEEQAREVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +    R     VVD+  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPDQTLADAKELQERYRVTGFPVVDDSGRVLGIVTNRDMRFASD---DRTPVSVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   IL++      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SDHLAILQEPADRDEAISLMKARRIEKLLVTDAKGKLTGLLTLRD 197



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A +L  ++ ++   VVDD  + +GIV   D+
Sbjct: 94  NPITLRPDQTLADAKELQERYRVTGFPVVDDSGRVLGIVTNRDM 137


>gi|297811195|ref|XP_002873481.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
 gi|297319318|gb|EFH49740.1| CBS domain-containing protein [Arabidopsis lyrata subsp. lyrata]
          Length = 206

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E Q L GIITE D  R      +   +  V 
Sbjct: 74  WCTTDDTVYDAVKSMTQHNVGALVVVKPGEQQVLAGIITERDYLRKIIVQGRSSKSTKVG 133

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+ D    IG+V   D++R 
Sbjct: 134 DIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIKDKGM-IGMVSIGDVVRA 186



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+ 
Sbjct: 111 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPETKVLRAMQLMTDNRIRHIPVIK 170

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   + G+++ GD+ R  
Sbjct: 171 DKG-MIGMVSIGDVVRAV 187


>gi|157376256|ref|YP_001474856.1| inositol-5-monophosphate dehydrogenase [Shewanella sediminis
           HAW-EB3]
 gi|157318630|gb|ABV37728.1| Malate dehydrogenase [Shewanella sediminis HAW-EB3]
          Length = 490

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  +    + ++    ++
Sbjct: 41  NTPIVSAAMDTVTEGRLAIAIAQEGGLGFIHKNMTIEQQAEEVRKVKSYEAGIVQKPVTV 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L D   +  +  F    VV+E  +L GIIT  D+   F  D  +L+V++VM 
Sbjct: 101 T---PTTTLADLKVLTLKNGFAGYPVVNEANELVGIITGRDVR--FVTDW-SLTVDEVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L     L+  H +  ++VVD   K  G++   D  + 
Sbjct: 155 PKDRLVTVPEGTKLDEVQALMHSHRVEKVLVVDGDFKLKGLITVKDFQKA 204


>gi|302392835|ref|YP_003828655.1| hypothetical protein Acear_2100 [Acetohalobium arabaticum DSM 5501]
 gi|302204912|gb|ADL13590.1| CBS domain containing membrane protein [Acetohalobium arabaticum
           DSM 5501]
          Length = 148

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 59/140 (42%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
             + +  V     + D   +LS+     + V+++  ++ GIITE D+             
Sbjct: 7   MTEDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLIIRDKKLHFPDYI 66

Query: 273 -----------FRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       R F ++        VE+VM +    + ++T     ++L+ +H I+ + 
Sbjct: 67  YLLDSIIYLESLREFEEEFKKMIGTQVEEVMTEEVITVNQETPTDEIVELMLEHKINRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D+  + +GI+   DL++ 
Sbjct: 127 VIDN-GELVGIISRGDLVKL 145



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ED+M ++   + +D  +    +LL  + IS L V++D  + +GI+   DL+
Sbjct: 3   AEDIMTEDVITVNQDDTIKDVARLLSDNEISGLPVINDDGEVVGIITEQDLI 54



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + +  V    P  + + ++ E +   V V+D   +L GII+ GD+ +   
Sbjct: 97  MTEEVITVNQETPTDEIVELMLEHKINRVPVID-NGELVGIISRGDLVKLLA 147


>gi|257455306|ref|ZP_05620541.1| inosine-5'-monophosphate dehydrogenase [Enhydrobacter aerosaccus
           SK60]
 gi|257447268|gb|EEV22276.1| inosine-5'-monophosphate dehydrogenase [Enhydrobacter aerosaccus
           SK60]
          Length = 488

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AI + +          +LH    +    +    V        +
Sbjct: 41  NLPIVSAAMDTVTESQMAITIAQLGG-----MGILHKNMDIDLQAMQVRRVKKFEAGTVV 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + I  E +   V VV EG ++ GI+T  DI   F  +L +  V ++
Sbjct: 96  DPISVSPDTSVGELLRITKENKISGVPVV-EGNQVVGIVTHRDIR--FENNL-SQPVRNI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E        +LL +H I  ++VVDD  +  G++   D  + 
Sbjct: 152 MTPKEKLVTVKEGEPTENIKRLLHEHRIEKVIVVDDNFQLKGLITVNDFTKA 203


>gi|257137929|ref|ZP_05586191.1| RpiR family transcriptional regulator [Burkholderia thailandensis
           E264]
          Length = 322

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVADAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|167618688|ref|ZP_02387319.1| transcriptional regulator, RpiR family protein [Burkholderia
           thailandensis Bt4]
          Length = 322

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVADAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|187731910|ref|YP_001881226.1| RpiR family transcriptional regulator [Shigella boydii CDC 3083-94]
 gi|263504717|sp|B2TX16|MURR_SHIB3 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|187428902|gb|ACD08176.1| transcriptional regulator, RpiR family [Shigella boydii CDC
           3083-94]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|47564653|ref|ZP_00235697.1| CBS domain protein [Bacillus cereus G9241]
 gi|47558026|gb|EAL16350.1| CBS domain protein [Bacillus cereus G9241]
          Length = 139

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   I  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSIAPDDSIEKATELMAQYQIRRLPVV-ENGQLVGMLALGDL 117



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDFMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|304391059|ref|ZP_07373011.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
 gi|304325942|gb|EFL93188.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. curtisii ATCC 35241]
          Length = 212

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
               +   +  G  + DAI ++       + V+    KL G++++ D+ R    D     
Sbjct: 6   RMTANPFTIDSGATVPDAIELMQTHGITKLPVL-RDGKLCGVVSQLDLNRALPSDATSLS 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ L +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++  
Sbjct: 65  FGEVAYLLSKLKIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITE 123

Query: 333 LDLLRF 338
            D+L  
Sbjct: 124 SDVLDA 129



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G++  L            + P +     L +A  ++ + +   + V+DE  K+ G+ITE 
Sbjct: 66  GEVAYLLSKLKIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITES 124

Query: 271 DIFRNF 276
           D+   F
Sbjct: 125 DVLDAF 130


>gi|289551625|ref|YP_003472529.1| 6-phospho-3-hexuloisomerase [Staphylococcus lugdunensis HKU09-01]
 gi|289181156|gb|ADC88401.1| 6-phospho-3-hexuloisomerase [Staphylococcus lugdunensis HKU09-01]
          Length = 182

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE +L      Q+      +   +  +   G G+SG I +  A  L   G  ++ V 
Sbjct: 11  LEELERTLSHVQDEQYDRFANDVNGAQS-IFTAGKGRSGFIANSFAMRLNQLGKDAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL ++LS SGS+  L+ +   A+     ++ +T+   S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFVILSGSGSTAHLRLLAEKAQTVGAKVVLLTTNPDSPIGELAE 124

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q A    D++ + L+++ N  E      H
Sbjct: 125 TVIELPAGTKYNAEGSEQPLGSLFEQAALLFLDSVVLGLMDTFNIDEETMQNNH 178


>gi|313125589|ref|YP_004035853.1| transcriptional regulator, contains c-terminal cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312291954|gb|ADQ66414.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
          Length = 380

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/82 (36%), Positives = 48/82 (58%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           EG+KL GIIT  DI      +L+ +SVED++ K+   I E + +  A+  LR++ IS L 
Sbjct: 98  EGEKLYGIITGNDILEAVLDNLDAISVEDILTKDVVTIGEKSHVGQAINRLRENGISRLP 157

Query: 319 VVDDCQKAIGIVHFLDLLRFGI 340
           V D+  K  G++   D++ F +
Sbjct: 158 VTDEDGKLTGVLTTHDIIEFSV 179



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 44/123 (35%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------------FRNFH 277
           +     +  AI  L E     + V DE  KL G++T  DI                R   
Sbjct: 135 IGEKSHVGQAINRLRENGISRLPVTDEDGKLTGVLTTHDIIEFSVRNADRQGRGDRRGDL 194

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIVHFLDL 335
             +  L V D+M            +   +  +  ++I  ++V   D   + +GI+   D+
Sbjct: 195 DRMLDLPVYDLMSSPVITATPGEKIDTVVSRMFDNDIEGVVVTPTDSDTEVLGILTKTDV 254

Query: 336 LRF 338
           LR 
Sbjct: 255 LRA 257



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +V    +  G+I E  + R+  +D        VM   PK I     +  A ++L + + 
Sbjct: 35  VIVTNDGEYAGVIGEKQLVRSRMED--DTKASAVMKSAPK-IDRHEDVREAARMLVEGDT 91

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
            +     + +K  GI+   D+L  
Sbjct: 92  RIAPAY-EGEKLYGIITGNDILEA 114


>gi|288932476|ref|YP_003436536.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288894724|gb|ADC66261.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 389

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 1/83 (1%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             VV E  K  G+I   D+       L      DVM  N   I        A+ L+R + 
Sbjct: 102 FVVVKENGK-YGVIYINDLLEALKDRLKDKKARDVMNPNVVTINAHESAAKALALMRTNG 160

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I  L+VVDD  + +G++   D++
Sbjct: 161 IDRLVVVDDSHRVVGVITGKDII 183



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRN-- 275
              ++  +        A+ ++       + VVD+  ++ G+IT  DI         R   
Sbjct: 136 MNPNVVTINAHESAAKALALMRTNGIDRLVVVDDSHRVVGVITGKDIIDRIVAPRRRARL 195

Query: 276 ----FHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 KD   ++ VE +M   P        L   ++ + +H +S +++V       GIV
Sbjct: 196 GEEKGEKDKTLSIMVESIMSYPPVTAERMDSLADIVEQMLEHKVSSVVIVSKDNIPEGIV 255

Query: 331 HFLDLL 336
              D+L
Sbjct: 256 TKKDIL 261



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 49/116 (42%), Gaps = 7/116 (6%)

Query: 227 GDSIPLVKIGCPLIDA---ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNT 282
                +V     +      +  L + + G + V+ E  K+ G++ E D+ R +   + + 
Sbjct: 10  RYDFEIVNAEDTISKVFPLLDKLDQDKAGAILVM-EDGKVYGVVREKDLLRTSVLVNPHE 68

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V+   IK   + + +  L   ++   + + +  +VV +  K  G+++  DLL  
Sbjct: 69  TKVKSAAIKTGIINVSELTLEKVLRRFIEDS-TPFVVVKENGKY-GVIYINDLLEA 122


>gi|310821572|ref|YP_003953930.1| inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
 gi|309394644|gb|ADO72103.1| Inosine-5'-monophosphate dehydrogenase [Stigmatella aurantiaca
           DW4/3-1]
          Length = 485

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 67/184 (36%), Gaps = 15/184 (8%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           ++      L L     S        + + + +A    + +     +N +     +     
Sbjct: 31  LSTRLTRQLRLHIPLLSAAMDTVTESRSAIAMAQEGGIGV---IHKNMTPEQQAL----- 82

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +                ++ G PL  A+ ++       V V  +G++L GI+T  D
Sbjct: 83  ---EVLKVKKFESGMVVDPVTIEPGAPLARALELMRHHGVSGVPVT-QGRRLVGIVTSRD 138

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   F  +L T  VE VM +      E      A  LL QH I  L++V++  +  G++ 
Sbjct: 139 VR--FETNL-TQKVEQVMTRKLITGREGITQPEAQALLHQHRIEKLLIVNEEFELKGLIT 195

Query: 332 FLDL 335
             D+
Sbjct: 196 IKDI 199


>gi|218295241|ref|ZP_03496077.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
 gi|218244444|gb|EED10969.1| CBS domain containing protein [Thermus aquaticus Y51MC23]
          Length = 208

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------LSVE 286
           V     L +A  +L EK    + VV +  KL GI+T+ DI                  V 
Sbjct: 14  VGPETTLEEAYRLLLEKGIRHLPVV-KDGKLLGIVTDRDIRLATSHLNPKGPCPGCTQVG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V+ K          +  A  ++R   I  L V+ +  + +GIV  +DLL  
Sbjct: 73  EVVTKEVVTAHPLDPVEEAAFVMRHRKIGCLPVL-EDGELVGIVTGIDLLDA 123



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+DVM      +  +T L  A +LL +  I  L VV    K +GIV   D+
Sbjct: 3   VKDVMKSPVLSVGPETTLEEAYRLLLEKGIRHLPVV-KDGKLLGIVTDRDI 52



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               P+ +A  ++  ++ GC+ V+ E  +L GI+T  D+     +
Sbjct: 83  HPLDPVEEAAFVMRHRKIGCLPVL-EDGELVGIVTGIDLLDALLR 126


>gi|150399812|ref|YP_001323579.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150012515|gb|ABR54967.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 303

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 55/106 (51%), Gaps = 1/106 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++    + +   +LSEK    + ++ E +KL GII+  DI     K L    V  +M  N
Sbjct: 184 IRPDETVKNTAKVLSEKNISGIPIM-EDKKLLGIISLHDIADAVSKGLENEKVSKIMATN 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I +D  +  A+ L+ ++N+  L++V++ +  +GI+   D+L+ 
Sbjct: 243 TFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKL 288



 Score = 43.3 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 284 SVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV +V  K+    I  D  +    ++L + NIS + ++ + +K +GI+   D+   
Sbjct: 171 SVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIM-EDKKLLGIISLHDIADA 225



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +               +   +     + DA+ ++ +   G + +V+E +   GIIT 
Sbjct: 223 ADAVSKGLENEKVSKIMATNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITR 282

Query: 270 GDIFRNFHKDLN 281
            DI +     + 
Sbjct: 283 TDILKLIEGTIF 294


>gi|332158424|ref|YP_004423703.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           sp. NA2]
 gi|331033887|gb|AEC51699.1| inosine-5'-monophosphate dehydrogenase-like protein II [Pyrococcus
           sp. NA2]
          Length = 178

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +               +V+    +     ILS+ + G   VV E  ++ GI+TE DI   
Sbjct: 1   MAPRILVEQIVKRKAIVVRPNDTVHKVARILSKNKVGSA-VVMEKDEILGIVTERDILDK 59

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                KD   + VE++M +NP  I  D  +  A++++ +  +  ++V     K IG V  
Sbjct: 60  VVAKGKDPKEVKVEEIMTRNPVKIEYDYDVQDAIEVMTEKGVRRILVT-KFGKPIGFVTA 118

Query: 333 LDLLRF 338
            DLL  
Sbjct: 119 TDLLAA 124


>gi|325922090|ref|ZP_08183884.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas gardneri ATCC
           19865]
 gi|325547427|gb|EGD18487.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas gardneri ATCC
           19865]
          Length = 485

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPAQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + I +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVIALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKK 203


>gi|323516146|gb|ADX90527.1| hypothetical protein ABTW07_0088 [Acinetobacter baumannii
           TCDC-AB0715]
          Length = 344

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
                ++ A+ +L       V VVD+   L G IT+GDI R   K  +   SVE +M  N
Sbjct: 2   HKNDSILKALELLDLYALRIVLVVDDHNHLIGSITDGDIRRGLLKGQDVHASVETIMHTN 61

Query: 293 PKVILEDTLLT-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           P  I E +L      +++R+ +   L V+    + + I+   DL+R  
Sbjct: 62  PYSIEEGSLNNRQIFEIMREKSYLALPVI-KNNQLVNIITLDDLIRKK 108


>gi|257868544|ref|ZP_05648197.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           gallinarum EG2]
 gi|257802708|gb|EEV31530.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           gallinarum EG2]
          Length = 282

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/208 (16%), Positives = 75/208 (36%), Gaps = 5/208 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +   +++   +    ++ +  A +   +    L++L  + +         AV+ I
Sbjct: 72  MLMQENDLSAISFHENIQQSDNELTMARKVFDS---NLTTLTDTRKLLQEEDLKQAVQMI 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            + K R+   G+G S  + +        +               +  ++T +D  +++S 
Sbjct: 129 DSAK-RLFFFGVGGSEIVAADAYHKFLRSPISVVHSADYHIQLMEAALLTPEDCALLISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G S E   +   A+     +I ITS   S +A   D+V  +    E      A  +   
Sbjct: 188 TGKSKETIELAQVAKDCGAKVIVITSHAASPLAKLGDVVF-ISVSEEIEFRSEALASRIS 246

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLH 208
               I     I +  +RN S++    + 
Sbjct: 247 QLSIIDSLYVILMFINRNKSQDSIAKVR 274


>gi|253579625|ref|ZP_04856894.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
 gi|251849126|gb|EES77087.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
          Length = 485

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +   +++ 
Sbjct: 96  DPFYLSPEHTLKDADELMAKFRISGVPIT-EGRKLVGIITNRDLK--FETDFSK-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 152 MTSEGLITAKEGITLEDAKKILAKSRKEKLPIVDDDFNLKGLITIKDI 199


>gi|119383004|ref|YP_914060.1| DNA-binding transcriptional repressor RpiR [Paracoccus
           denitrificans PD1222]
 gi|119372771|gb|ABL68364.1| transcriptional regulator, RpiR family [Paracoccus denitrificans
           PD1222]
          Length = 287

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 66/177 (37%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S+     +      + L    S +       F  A   +   + R    G+G S  I 
Sbjct: 95  EDSSADIIRKVFQTSIQALEETMSIID---VSAFDRAATLLHGARQR-DFYGVGGSAQIA 150

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             +A      G  +              ++  +D+++  S SG++  +      AR+   
Sbjct: 151 RDVAHKFLRIGLRAGVQDDPHMMLMSAALLGPEDVVVAFSHSGTTSNVIEAARLARQQGA 210

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +IAIT+   + ++  ADI L    +        A   + I QL I DA+ +A+ + 
Sbjct: 211 RVIAITNYATAPLSELADIALCSTAQGSPLLGENA--AARIAQLNIMDAIFVAVAQR 265


>gi|331653854|ref|ZP_08354855.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M718]
 gi|331048703|gb|EGI20779.1| putative transcriptional regulator, RpiR family [Escherichia coli
           M718]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|218663714|ref|ZP_03519644.1| inositol-5'-monophosphate dehydrogenase [Rhizobium etli IE4771]
          Length = 377

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTV 304
           +       + VV++  +L GI+T  D+            + ++M K N   + E+     
Sbjct: 1   MKSHGISGIPVVEKSGRLVGILTNRDVRFASDP---EQKIHELMTKDNLVTVKENVDQQE 57

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           A +LL  H I  L+VVD   + +G++   D+
Sbjct: 58  AKRLLHSHRIEKLLVVDTEGRCVGLITVKDI 88


>gi|163731781|ref|ZP_02139228.1| inosine-5'-monophosphate dehydrogenase [Roseobacter litoralis Och
           149]
 gi|161395235|gb|EDQ19557.1| inosine-5'-monophosphate dehydrogenase [Roseobacter litoralis Och
           149]
          Length = 482

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 65/165 (39%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIGVVHRNLTIEEQAQEVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +    R     VVDE  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPEQTLADAKALQDRYRVTGFPVVDEKGRVLGIVTNRDMRFASD---DRTPVSVMMS 152

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 GENLAILQEPADRDEAISLMKARRIEKLLVTDGNGKLTGLLTLKD 197



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  +  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLRPEQTLADAKALQDRYRVTGFPVVDEKGRVLGIVTNRDM 137


>gi|156937581|ref|YP_001435377.1| hexulose-6-phosphate isomerase [Ignicoccus hospitalis KIN4/I]
 gi|156566565|gb|ABU81970.1| hexulose-6-phosphate isomerase [Ignicoccus hospitalis KIN4/I]
          Length = 201

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 69/183 (37%), Gaps = 21/183 (11%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKG-RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
              L+     +F   + KI      +V++ G G+SG +    A  L   G  ++ +    
Sbjct: 19  SKMLKEHQVEEFTNLLVKIYNTPNSKVLVMGAGRSGLVARAFAMRLMHLGYNAYVLGDTI 78

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                   +   D++I +S SGS+  + A    A++    ++ +TS   S +   AD+V+
Sbjct: 79  VP-----SVREGDVVIAISGSGSTKLVLAAAEAAKQVGATVVVLTSYPNSPLGKLADVVV 133

Query: 161 TLPKEPESCPHGLAPTTSAIMQL---------------AIGDALAIALLESRNFSENDFY 205
            +P   +        +   + Q                A  D+L + L+     SE D  
Sbjct: 134 EIPGRTKLSKSQDYFSRQILGQHEPLAPLGTLFEITVQAFLDSLVVELMNRLGKSEEDLR 193

Query: 206 VLH 208
           + H
Sbjct: 194 MQH 196


>gi|312796275|ref|YP_004029197.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia rhizoxinica
           HKI 454]
 gi|312168050|emb|CBW75053.1| Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) [Burkholderia
           rhizoxinica HKI 454]
          Length = 487

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLISAAMDTVTEGRLAIAMAQQGGIGIVH-KNLTPAEQAREVAKVKRFESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VVD G KL GI+T  D+   F + L    V  +M   
Sbjct: 99  VPPDMKVHDVIALSRQHGISGFPVVD-GAKLIGIVTNRDLR--FEERLGE-PVRAIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E T L  A  L+ +H +  ++VV++  +  G++   D+ + 
Sbjct: 155 ERLVTVSEGTSLAQAKALMHRHRLERVLVVNEAFELRGLMTVKDITKA 202


>gi|218248189|ref|YP_002373560.1| Chloride channel core [Cyanothece sp. PCC 8801]
 gi|257060487|ref|YP_003138375.1| chloride channel core [Cyanothece sp. PCC 8802]
 gi|218168667|gb|ACK67404.1| Chloride channel core [Cyanothece sp. PCC 8801]
 gi|256590653|gb|ACV01540.1| Chloride channel core [Cyanothece sp. PCC 8802]
          Length = 879

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L   I  +S        V+ E  KL GI+T+ D+     K  +   V+  M   P
Sbjct: 466 PSDLTLDQVIQAMSLSSHRGFPVM-EEGKLVGIVTQTDVANA-AKLSSQTPVKQFMTPRP 523

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D LL+  + LL ++ +S L V  +  K +GI+   D++R
Sbjct: 524 ISVEADALLSDVLYLLNRYQLSRLPVT-EGSKLVGIITRTDIIR 566


>gi|167825816|ref|ZP_02457287.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei 9]
 gi|226196816|ref|ZP_03792395.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pakistan 9]
 gi|225931076|gb|EEH27084.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pakistan 9]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|170019291|ref|YP_001724245.1| RpiR family transcriptional regulator [Escherichia coli ATCC 8739]
 gi|263504645|sp|B1IX45|MURR_ECOLC RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|169754219|gb|ACA76918.1| transcriptional regulator, RpiR family [Escherichia coli ATCC 8739]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|76810573|ref|YP_334815.1| RpiR family transcriptional regulator [Burkholderia pseudomallei
           1710b]
 gi|76580026|gb|ABA49501.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1710b]
          Length = 339

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 106 RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 164

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 165 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 223

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 224 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 264


>gi|157161893|ref|YP_001459211.1| RpiR family transcriptional regulator [Escherichia coli HS]
 gi|263504642|sp|A8A2S4|MURR_ECOHS RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|157067573|gb|ABV06828.1| transcriptional regulator, RpiR family [Escherichia coli HS]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|53720541|ref|YP_109527.1| putative regulatory protein [Burkholderia pseudomallei K96243]
 gi|126441034|ref|YP_001060420.1| RpiR family transcriptional regulator [Burkholderia pseudomallei
           668]
 gi|167817410|ref|ZP_02449090.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei 91]
 gi|167847300|ref|ZP_02472808.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei B7210]
 gi|167895887|ref|ZP_02483289.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei 7894]
 gi|167912536|ref|ZP_02499627.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei 112]
 gi|254190918|ref|ZP_04897424.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254199138|ref|ZP_04905553.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           S13]
 gi|254260463|ref|ZP_04951517.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1710a]
 gi|52210955|emb|CAH36943.1| putative regulatory protein [Burkholderia pseudomallei K96243]
 gi|126220527|gb|ABN84033.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           668]
 gi|157938592|gb|EDO94262.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|169656968|gb|EDS88365.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           S13]
 gi|254219152|gb|EET08536.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1710a]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|330965487|gb|EGH65747.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. actinidiae str. M302091]
          Length = 644

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|167920489|ref|ZP_02507580.1| transcriptional regulator, RpiR family protein [Burkholderia
           pseudomallei BCC215]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|167839482|ref|ZP_02466166.1| CBS domain protein [Burkholderia thailandensis MSMB43]
          Length = 154

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           SG +I  ++    + +AI +++E+  G + V+D    + GI+TE D  R      +    
Sbjct: 15  SGRTIHTIEKSDSVYNAIKLMAERSIGALLVMDGAN-IAGIVTERDYARKVVLLDRSSKA 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VE++M    + +         M L+ +H +  L V+DD  K IG+V   DL++
Sbjct: 74  TRVEEIMTAKVRYVEPTQTSDECMALMTEHRMRHLPVLDD-GKLIGLVSIGDLVK 127



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 32/80 (40%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+        L                +  V+      + + +++E R   + V+D+
Sbjct: 56  TERDYA--RKVVLLDRSSKATRVEEIMTAKVRYVEPTQTSDECMALMTEHRMRHLPVLDD 113

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             KL G+++ GD+ ++   D
Sbjct: 114 -GKLIGLVSIGDLVKSVIAD 132


>gi|134280591|ref|ZP_01767302.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           305]
 gi|134248598|gb|EBA48681.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           305]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|126455203|ref|YP_001067681.1| RpiR family transcriptional regulator [Burkholderia pseudomallei
           1106a]
 gi|242314829|ref|ZP_04813845.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106b]
 gi|126228845|gb|ABN92385.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106a]
 gi|242138068|gb|EES24470.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106b]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|331015014|gb|EGH95070.1| nucleotidyltransferase, putative [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 644

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|308071366|ref|YP_003872971.1| 6-phospho 3-hexuloisomerase (PHI) [Paenibacillus polymyxa E681]
 gi|305860645|gb|ADM72433.1| 6-phospho 3-hexuloisomerase (PHI) [Paenibacillus polymyxa E681]
          Length = 185

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A   +V + G G+SG +   LA  L   G  ++ V   E     LG     DL+I+ S S
Sbjct: 34  AAANKVFVAGAGRSGFMIRSLAMRLMHMGVQAYVV--GETVTPGLG---EGDLLIIGSGS 88

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG----LAPTT 177
           G +  L ++   A++    L  +T+   S +   ADI++ LP  P+   +     + P  
Sbjct: 89  GETKSLTSMAEKAKKLGASLALLTTSPGSTIGKMADIIVKLPGAPKDPSNKDYQTIQPMG 148

Query: 178 SAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           S   Q     GDAL +  +E R  +    +  H
Sbjct: 149 SLFEQTLLLYGDALVLRTMEMRKLTSESMFGQH 181


>gi|269104807|ref|ZP_06157503.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268161447|gb|EEZ39944.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 625

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 58/134 (43%), Gaps = 10/134 (7%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-------EGQKLKGI 266
           G                 ++     +  A  +++E+    + V +       E   L GI
Sbjct: 144 GNDLTTVKARKILTREPVIIDASESIQAAANLMAEENITALLVANSESSDSEEHDHLLGI 203

Query: 267 ITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+  R   + ++T L + +VM  +   +  +  +  AM ++ ++N+  L ++   +
Sbjct: 204 LTDRDLCIRVLAQGIDTNLPISEVMTTDVISLDYNAYVFEAMLMMLRYNVHHLPII-KDK 262

Query: 325 KAIGIVHFLDLLRF 338
           K IGI+   D++R+
Sbjct: 263 KPIGIIGLTDIVRY 276


>gi|24372818|ref|NP_716860.1| acetoin utilization protein AcuB, putative [Shewanella oneidensis
           MR-1]
 gi|24346917|gb|AAN54305.1|AE015568_3 acetoin utilization protein AcuB, putative [Shewanella oneidensis
           MR-1]
          Length = 143

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  V++   L  A  I  +  F  + V+DE  KL+G+++E D+ R    +L     
Sbjct: 9   MCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDE-YKLEGVLSERDLLRAISPNLGNGAE 67

Query: 283 ---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      +  VM +NP  +     L VA + L +HNI  L V+++    +GIV + 
Sbjct: 68  TSKDLETLQKRIHQVMTRNPVTVAPYVSLDVASRTLLEHNIGCLPVLENGD-LVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA  +  Q N   L+V+D+  K  G++   DLLR 
Sbjct: 5   IADIMCTRVVTVEMDDRLTVAKDIFEQANFHHLLVLDE-YKLEGVLSERDLLRA 57



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 26/69 (37%), Gaps = 3/69 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                L TL      VM    +   V     L  A   L E   GC+ V+ E   L GI+
Sbjct: 67  ETSKDLETLQKRIHQVM--TRNPVTVAPYVSLDVASRTLLEHNIGCLPVL-ENGDLVGIV 123

Query: 268 TEGDIFRNF 276
           T  D+ R +
Sbjct: 124 TWKDLLRAY 132


>gi|30248126|ref|NP_840196.1| guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein
           [Nitrosomonas europaea ATCC 19718]
 gi|30180011|emb|CAD84006.1| guaB; inosine-5'-monophosphate dehydrogenase oxidoreductase protein
           [Nitrosomonas europaea ATCC 19718]
          Length = 487

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +       + V         
Sbjct: 40  KIPIVSAAMDTVTEARLAIAIAQEGGIG-----IIHKNMPIKAQAAQVAQVKRFESGVVT 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              +V     +   + ++ +     + VV + +K+ GI+T  D+   F  +L+   V+++
Sbjct: 95  DPIIVSPDMTVRKVLELIRQHNISGLPVV-KSKKVVGIVTNRDLR--FETNLDQ-PVKNI 150

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   K+   + E      A+ LL +H +   ++V +  +  G++   D+ R
Sbjct: 151 MTPKKHLVTVREGVSKEDALALLHKHRLEKALIVSENFELRGMITVKDITR 201


>gi|17232383|ref|NP_488931.1| hypothetical protein alr4891 [Nostoc sp. PCC 7120]
 gi|17134028|dbj|BAB76590.1| alr4891 [Nostoc sp. PCC 7120]
          Length = 871

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/104 (30%), Positives = 51/104 (49%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNP 293
               L +A    +        VV E  KL GIIT+ D+ ++  + L N   + ++M  NP
Sbjct: 452 AEITLEEAKQAFASSHHRGFPVV-EDNKLVGIITQSDLTKSLSRSLENNPHLREIMTANP 510

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +     L+  + LL ++ IS L VV + QK IGI+   D++R
Sbjct: 511 MTVTPIHTLSNVLYLLDRYQISRLPVV-EGQKLIGIITRADIIR 553



 Score = 42.6 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ ++ +DVM +  + +  +  L  A Q     +     VV +  K +GI+   DL +
Sbjct: 434 LSQMTAKDVMQQRVETLDAEITLEEAKQAFASSHHRGFPVV-EDNKLVGIITQSDLTK 490


>gi|332298880|ref|YP_004440802.1| CBS domain containing membrane protein [Treponema brennaborense DSM
           12168]
 gi|332181983|gb|AEE17671.1| CBS domain containing membrane protein [Treponema brennaborense DSM
           12168]
          Length = 212

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 13/122 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   V     + DA  ++++++ G + V+D   +L GIIT+ D+ ++          
Sbjct: 7   MTKNPVFVSPDMSVNDARALMTKQKIGKLPVLDRNNRLVGIITKKDLIKSGPSAATTLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ L VE VM +N   + +  ++  A +++   +I  L V+      +GI+   
Sbjct: 67  YEISYLLSKLKVEKVMERNVVSVQQTEVVEEAARIMADSDIGCLPVM-KGDLLVGIITET 125

Query: 334 DL 335
           DL
Sbjct: 126 DL 127



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           V +VM KNP  +  D  +  A  L+ +  I  L V+D   + +GI+   DL++ G
Sbjct: 3   VANVMTKNPVFVSPDMSVNDARALMTKQKIGKLPVLDRNNRLVGIITKKDLIKSG 57


>gi|322831779|ref|YP_004211806.1| inosine-5'-monophosphate dehydrogenase [Rahnella sp. Y9602]
 gi|321166980|gb|ADW72679.1| inosine-5'-monophosphate dehydrogenase [Rahnella sp. Y9602]
          Length = 544

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 48/219 (21%), Positives = 76/219 (34%), Gaps = 16/219 (7%)

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQL 183
           L  IL   R   I   A+T ++  +V  H+ +      L  +  +      P  SA M  
Sbjct: 51  LGEILPMLR---IAKEALTFDDVLLVPAHSTVLPNTADLGTQLTAKIRLNIPMLSAAMDT 107

Query: 184 AIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
                LAIAL +     F   +  +     ++  +    S V+        V     L  
Sbjct: 108 VTEANLAIALAQEGGLGFIHKNMSIERQAEEVRRVKKHESGVV---ADPKTVTPSTTLRQ 164

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILED 299
              +     F    VV E  +L GIIT  D+   F  DL    V  VM        + E 
Sbjct: 165 VKELTEINGFAGYPVVTEENELVGIITGRDVR--FVTDL-EQPVTAVMTPKERLVTVKEG 221

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +Q + +  +   +VVD     +G++   D  + 
Sbjct: 222 EAREVVLQKMHEKRVEKALVVDAQFHLLGMITVKDFQKA 260


>gi|301382394|ref|ZP_07230812.1| nucleotidyltransferase, putative [Pseudomonas syringae pv. tomato
           Max13]
 gi|302061213|ref|ZP_07252754.1| nucleotidyltransferase, putative [Pseudomonas syringae pv. tomato
           K40]
 gi|302132415|ref|ZP_07258405.1| nucleotidyltransferase, putative [Pseudomonas syringae pv. tomato
           NCPPB 1108]
          Length = 644

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPDMPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|187923026|ref|YP_001894668.1| glucokinase [Burkholderia phytofirmans PsJN]
 gi|187714220|gb|ACD15444.1| glucokinase [Burkholderia phytofirmans PsJN]
          Length = 638

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 7/195 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E   Q   A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---QVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESRNFSENDFY 205
           + +   R     D  
Sbjct: 593 VGVAIRRAVPSADVA 607


>gi|110635121|ref|YP_675329.1| CBS domain-containing protein [Mesorhizobium sp. BNC1]
 gi|110286105|gb|ABG64164.1| CBS domain containing protein [Chelativorans sp. BNC1]
          Length = 151

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + +      + DA  I++E   G + V D   +L G+IT+ DI  R   K L    
Sbjct: 7   MTRDVRVASPDDTIEDAARIMAEIDAGSLPVGDND-RLVGMITDRDIAVRAVAKGLGPEC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V DVM +  +   ED         +    I  L VV+  ++ +GI+   D+
Sbjct: 66  PVSDVMTREIRYCFEDEDTDDIAHNMADQQIRRLPVVNRDKRLVGILSLGDI 117



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V +VM ++ +V   D  +  A +++ + +   L V D+  + +G++   D+
Sbjct: 1   MRVSEVMTRDVRVASPDDTIEDAARIMAEIDAGSLPVGDND-RLVGMITDRDI 52


>gi|47027028|gb|AAT08729.1| CBS1 [Hyacinthus orientalis]
          Length = 203

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 71  WCTTDDSVYDAVKSMTQHNVGALVVVKPGEEKDIAGIITERDYLRKIIVQGRSSKSTKVG 130

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +   T +  AMQL+  + I  + V+ D    IG+V   D++R 
Sbjct: 131 DIMTEENKLITVTPGTKVLQAMQLMTDNRIRHIPVIGDKGM-IGMVSIGDVVRA 183


>gi|217420416|ref|ZP_03451921.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           576]
 gi|217395828|gb|EEC35845.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           576]
          Length = 332

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVAEAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACDAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|188590819|ref|YP_001795419.1| hypothetical protein RALTA_A0024 [Cupriavidus taiwanensis LMG
           19424]
 gi|170937713|emb|CAP62697.1| conserved hypothetical protein, CBS domain [Cupriavidus taiwanensis
           LMG 19424]
          Length = 146

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
               +I  +     +  A+ +++EK  G + V+ E  ++KGI++E D  R      +   
Sbjct: 11  KPSQAIYSIPPTATVYAALQLMAEKGIGALLVI-EHGEIKGILSERDYARKVILMQRTSR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M      +  +      M L+ +H +  L V+ +  + IG++   DL++
Sbjct: 70  ETLVRDIMTTAVIYVSANQTTDECMALMTRHRLRHLPVM-EGNQLIGMLSIGDLVK 124



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 8/128 (6%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-----FSENDFYVLH 208
             A  VL               T  A +QL     +   L+          SE D+    
Sbjct: 2   KTARQVLESKPSQAIYSIPPTATVYAALQLMAEKGIGALLVIEHGEIKGILSERDYARKV 61

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
              +  +      D+M +   +  V       + + +++  R   + V+ EG +L G+++
Sbjct: 62  ILMQRTSRETLVRDIMTTA--VIYVSANQTTDECMALMTRHRLRHLPVM-EGNQLIGMLS 118

Query: 269 EGDIFRNF 276
            GD+ ++ 
Sbjct: 119 IGDLVKDI 126


>gi|167837869|ref|ZP_02464752.1| transcriptional regulator, RpiR family protein [Burkholderia
           thailandensis MSMB43]
          Length = 288

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSATSVADAIELLTRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +I+IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVISIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|297617214|ref|YP_003702373.1| signal transduction protein with CBS domains [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145051|gb|ADI01808.1| putative signal transduction protein with CBS domains
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 153

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               + +V     +   I    E+      VVD   K+KGI+T+GDI     +       
Sbjct: 8   MTQDVKVVNTDDSVGGVIRCFLEEGITSAVVVDNDNKVKGIVTDGDILAAVRQRRPVVVD 67

Query: 280 --------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                               +    V+++M K+   + EDT +    +L+ ++ I  + V
Sbjct: 68  VMSYFWAVGDDEDFVAKTDAVKQKKVKEIMTKHVVTVTEDTSIPEIARLMVENGIKQIPV 127

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V    + +G++   D+++ 
Sbjct: 128 V-QSGRIVGLIRRKDIVKA 145



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +D+M ++ KV+  D  +   ++   +  I+  +VVD+  K  GIV   D+L  
Sbjct: 3   QAKDIMTQDVKVVNTDDSVGGVIRCFLEEGITSAVVVDNDNKVKGIVTDGDILAA 57


>gi|197285405|ref|YP_002151277.1| inosine 5'-monophosphate dehydrogenase [Proteus mirabilis HI4320]
 gi|227355888|ref|ZP_03840280.1| inosine-5'-monophosphate dehydrogenase [Proteus mirabilis ATCC
           29906]
 gi|194682892|emb|CAR43240.1| inosine-5'-monophosphate dehydrogenase [Proteus mirabilis HI4320]
 gi|227163876|gb|EEI48778.1| inosine-5'-monophosphate dehydrogenase [Proteus mirabilis ATCC
           29906]
          Length = 488

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 66/183 (36%), Gaps = 12/183 (6%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +         P  SA M      +LAIAL +     F   +  +     ++  +  
Sbjct: 29  DLSTQLTETIRLNVPMLSAAMDTVTEASLAIALAQEGGIGFIHKNMPIERQAEEVRRVKK 88

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             S V+        V     L +    ++E+  F    VV +  +L GIIT  D+   F 
Sbjct: 89  HESGVV---TDPITVTPETSLREV-QAMTERNGFAGYPVVTKDNELVGIITGRDVR--FV 142

Query: 278 KDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            DL+   V  VM        + E     V MQ + +  +   +VVDD     G++   D 
Sbjct: 143 TDLDQ-PVTAVMTPKERLVTVKEGEARDVVMQKMHEKRVEKALVVDDHFHLKGMITVKDF 201

Query: 336 LRF 338
            + 
Sbjct: 202 KKA 204


>gi|28897390|ref|NP_796995.1| inosine 5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|28805602|dbj|BAC58879.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           RIMD 2210633]
          Length = 490

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 43  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---TDP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 100 VTVNPDATIADVVALTEKHGFAGFPVVTEHNELVGIITGRDVR--FVTDLSK-KVSAVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  K  G++   D  + 
Sbjct: 157 PKERLASVKEGATREEVQEKMHEARVEKVLVVNDEFKLTGMITAKDFHKA 206


>gi|153838542|ref|ZP_01991209.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ3810]
 gi|153839142|ref|ZP_01991809.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ3810]
 gi|260363546|ref|ZP_05776375.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           K5030]
 gi|260876349|ref|ZP_05888704.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AN-5034]
 gi|260898620|ref|ZP_05907116.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           Peru-466]
 gi|260899280|ref|ZP_05907675.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ4037]
 gi|149747354|gb|EDM58328.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ3810]
 gi|149748057|gb|EDM58916.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ3810]
 gi|308086873|gb|EFO36568.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           Peru-466]
 gi|308092846|gb|EFO42541.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AN-5034]
 gi|308106673|gb|EFO44213.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           AQ4037]
 gi|308113044|gb|EFO50584.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           K5030]
 gi|328472588|gb|EGF43451.1| inosine 5'-monophosphate dehydrogenase [Vibrio parahaemolyticus
           10329]
          Length = 488

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTEHNELVGIITGRDVR--FVTDLSK-KVSAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  K  G++   D  + 
Sbjct: 155 PKERLASVKEGATREEVQEKMHEARVEKVLVVNDEFKLTGMITAKDFHKA 204


>gi|114766854|ref|ZP_01445781.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Pelagibaca bermudensis HTCC2601]
 gi|114540975|gb|EAU44034.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseovarius sp. HTCC2601]
          Length = 607

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 67/180 (37%), Gaps = 8/180 (4%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCA 220
           E      G+A T++  ++  +   L +     L+     S+  F          T    +
Sbjct: 83  ERGLARDGIAATSARTVEETLLFMLPVYAFNELVREHPASKRFFDRSRGAKPRKTDLAHS 142

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKD 279
                       +     +  A   ++E+    V V  EG++L GI+T  D+  +     
Sbjct: 143 RVETLMAPKPLTLPPSATVQQAAKAMAERHVSSVCVT-EGERLLGILTIRDVSGKVVGAG 201

Query: 280 L-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L     +  VM  +P  +    + +  + ++ + N+  + V  +  + +G+V   DL RF
Sbjct: 202 LPFDTPLAQVMTADPMTLPPSAIGSDVLHMMMERNVGHVPV-SEGGRLVGMVTQTDLTRF 260


>gi|60686976|gb|AAX35684.1| CBS domain-like protein [Acidithiobacillus caldus]
          Length = 158

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              +   +     + +   IL E R   V V D   +L GI+TEGD+             
Sbjct: 7   MTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLVHRAADERLEPRE 66

Query: 273 -------------FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         R    D     +   VM +    +  +  +TVA +LL  HNI  L 
Sbjct: 67  SVWKENFYRSVFRRRTPETDKTEGRTAAQVMTREVLTVAPEDHVTVAARLLADHNIKSLP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+++  + IGI+   DL++
Sbjct: 127 VIENE-RLIGIISRFDLIK 144



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D+M  NP  I  +T +    ++L +H I+ + V D   + +GIV   DL+
Sbjct: 1   MKVRDLMTPNPIQIAPETAVAEIARILIEHRINGVPVTDTEGRLLGIVTEGDLV 54


>gi|300921360|ref|ZP_07137721.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300411672|gb|EFJ94982.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|170691980|ref|ZP_02883144.1| glucokinase [Burkholderia graminis C4D1M]
 gi|170143264|gb|EDT11428.1| glucokinase [Burkholderia graminis C4D1M]
          Length = 638

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/195 (18%), Positives = 68/195 (34%), Gaps = 7/195 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E   Q   A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---QVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESRNFSENDFY 205
           + +   R     D  
Sbjct: 593 VGVAIRRAVPSADVA 607


>gi|170076975|ref|YP_001733613.1| CBS domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169884644|gb|ACA98357.1| CBS domain protein [Synechococcus sp. PCC 7002]
          Length = 155

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/151 (23%), Positives = 59/151 (39%), Gaps = 30/151 (19%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
            +  +          +VK    L  AI +L EK+   + VVD   KL GII++ D+    
Sbjct: 1   MITKTVAEVMTPDPAVVKADDSLQTAIALLVEKKISALPVVDGQGKLVGIISDSDLTWQE 60

Query: 274 -------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                       HK L   +V +VM K    I  + ++  A  L
Sbjct: 61  TGVDTPPYIMLLDSVIYLQNPAKHDAEIHKALGQ-TVGEVMSKKVYTIHPEKIVREAAHL 119

Query: 309 LRQHNISVLMVVD-DCQKAIGIVHFLDLLRF 338
           + + ++  L V+  D +K IGI+   D++R 
Sbjct: 120 MHEKHVGRLPVIAPDSEKVIGIITQGDIIRA 150



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHK 278
               +  +     + +A  ++ EK  G + V+  + +K+ GIIT+GDI R   +
Sbjct: 100 MSKKVYTIHPEKIVREAAHLMHEKHVGRLPVIAPDSEKVIGIITQGDIIRAMAQ 153


>gi|159184394|ref|NP_353646.2| inositol-5-monophosphate dehydrogenase [Agrobacterium tumefaciens
           str. C58]
 gi|159139707|gb|AAK86431.2| inosine-5`-monophosphate dehydrogenase [Agrobacterium tumefaciens
           str. C58]
          Length = 457

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 2   NLPILSSAMDTVTEGRLAIAMAQAGGIGVIH-RNLTPIEQAEEVRQVKKFESGMVVNPVT 60

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE-------GQKLKGIITEGDIFRNFHKDLNTLSV 285
           +     L +A  ++       + VV+          +L GI+T  D+            +
Sbjct: 61  IGPDATLAEAQALMKAHGISGIPVVENGGAGGHKNGRLVGILTNRDVRFASDP---QQKI 117

Query: 286 EDVMIK-NPKVILEDT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E +     A +LL +H I  L+VVD     +G++   D+
Sbjct: 118 YELMTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNCVGLITVKDI 169


>gi|85375415|ref|YP_459477.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
 gi|84788498|gb|ABC64680.1| hypothetical protein ELI_12940 [Erythrobacter litoralis HTCC2594]
          Length = 143

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 7/128 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +  + ++    +  ++      P+ +AI +L+ KR G V V+ E   + GI +E D+   
Sbjct: 1   MEVAHLIERRAAADVITCDAHQPVREAIALLASKRIGAVPVM-ENGSIAGIFSERDVIYR 59

Query: 276 FHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             ++        V  VM      + + T +  A+ L+ +  I  L V D+     G V  
Sbjct: 60  MAEEGTSCLDKLVGQVMTAPAITVEKSTKVDEALALMTKRRIRHLPVTDN-GAFAGFVSI 118

Query: 333 LDLLRFGI 340
            DL++  I
Sbjct: 119 GDLVKSRI 126


>gi|154246304|ref|YP_001417262.1| signal-transduction protein [Xanthobacter autotrophicus Py2]
 gi|154160389|gb|ABS67605.1| putative signal-transduction protein with CBS domains [Xanthobacter
           autotrophicus Py2]
          Length = 143

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 57/121 (47%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G+ I  +     + DA+  L+ +R G + VVD+   ++GII+E D+ R   +   +
Sbjct: 7   LSRKGNDICTIGPDATVGDAVARLAGRRIGAIVVVDDAMSVEGIISERDVVRLIGEQGVN 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    +  VM +       D  + V M+ + +     + VV    K +GI+   D+++F 
Sbjct: 67  VLAEPLSSVMTRAVVTCTPDETVPVIMERMTRGRFRHVPVV-SGDKLVGIISIGDVVKFR 125

Query: 340 I 340
           +
Sbjct: 126 V 126


>gi|238026220|ref|YP_002910451.1| transcriptional regulator, RpiR family protein [Burkholderia glumae
           BGR1]
 gi|237875414|gb|ACR27747.1| Transcriptional regulator, RpiR family protein [Burkholderia glumae
           BGR1]
          Length = 298

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  + A   R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVAEAI-ALLARASRIEFYGAGGSGIAAQDVQHKFFRLGMPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      +++IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGAQDVVVAISNTGRTRDIVEAAKSALACGAKVVSIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 ASVNLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALQRG 257


>gi|330506462|ref|YP_004382890.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328927270|gb|AEB67072.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 286

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 6/97 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D +  L +++   + VV +  ++ GIIT  D+ RN  +D   L    +M ++P VI  D 
Sbjct: 24  DVLKTLQDRKVSGLPVV-KKGEVVGIITRSDLLRNREEDQTAL----LMTRDPVVISPDR 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  A +LL QH I  L VV + ++ +G+V   D++R
Sbjct: 79  SIVEASKLLIQHKIRRLPVV-EGKELVGLVTVADIVR 114



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 ++     +++A  +L + +   + VV EG++L G++T  DI R         S+
Sbjct: 67  MTRDPVVISPDRSIVEASKLLIQHKIRRLPVV-EGKELVGLVTVADIVRVAEGMNIEESI 125

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           E  + K   V+  +  L VA  ++    +    V+D   K +G++   DL++  +I
Sbjct: 126 EPYLEKETVVLWSEMPLPVAGSIMEFAAVEACPVIDTDLKLVGMISDRDLIKASVI 181



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 52/148 (35%), Gaps = 37/148 (25%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------- 275
                ++    PL  A +I+         V+D   KL G+I++ D+ +            
Sbjct: 130 EKETVVLWSEMPLPVAGSIMEFAAVEACPVIDTDLKLVGMISDRDLIKASVIEDSVEKTD 189

Query: 276 FHKD-------------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              D                         L  + V + M+  PK   +   ++    ++R
Sbjct: 190 MSADGGEDAWMWDRVMRTINKYYTVSRIRLRDIPVREAMVP-PKTAFKTDKVSDCAAVMR 248

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ I  + VV   +K +G++   D+LR 
Sbjct: 249 KNRIDQMPVVKTSRKLMGMLKDTDILRA 276


>gi|295703152|ref|YP_003596227.1| RpiR family transcriptional regulator [Bacillus megaterium DSM 319]
 gi|294800811|gb|ADF37877.1| transcriptional regulator, RpiR family [Bacillus megaterium DSM
           319]
          Length = 284

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 69/170 (40%), Gaps = 6/170 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + I      L +    +    S     A E I   K RV + G G S  +       L  
Sbjct: 102 KVISKSMSALMNTSRLVS---SSAIDAAAEAIHGAK-RVFLYGAGGSSVVALDAQYKLLR 157

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
               + F   +         +T+DD++ V+S SG + E+  ++  A+     +I +T   
Sbjct: 158 IDISALFSLDSHVQMVMATNMTKDDVLFVVSTSGQTKEVVELMQIAKDKGAAVILLTQHG 217

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            S  +  ADI+LT+  E +    G    ++ I QLA+ DA+ I L   + 
Sbjct: 218 SSPASRLADILLTISVEEQHIRIGT--MSARIAQLAVVDAMFIRLCIQKG 265


>gi|260575595|ref|ZP_05843593.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sp. SW2]
 gi|259022238|gb|EEW25536.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sp. SW2]
          Length = 482

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGIGVIHRNLGLEEQAHEVRRVKRFESGIVYAPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +          VVDE  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPDQTLADAKLLQDRYNVTGFPVVDEQGRVVGIVTNRDMRFASD---DRTPVRVMMT 152

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +N  V+ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SENLAVLHEPADRDAAISLMKARRIEKLLVTDGKGKLTGLLTLKD 197



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +  D  L  A  L  ++N++   VVD+  + +GIV   D+
Sbjct: 95  PITLRPDQTLADAKLLQDRYNVTGFPVVDEQGRVVGIVTNRDM 137


>gi|256828824|ref|YP_003157552.1| cyclic nucleotide-binding protein [Desulfomicrobium baculatum DSM
           4028]
 gi|256578000|gb|ACU89136.1| cyclic nucleotide-binding protein [Desulfomicrobium baculatum DSM
           4028]
          Length = 613

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 1/111 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           +    V       +A   + E+      V D   ++ GI+TE D+     +    + V +
Sbjct: 157 NDPVFVPASMSASEAAQTMRERGVSACLVGDAA-QVAGILTEKDVVAQAARGTLDVRVGE 215

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M      +  + L+  A   + +H I  L+VVD+ +K  G++   D+L  
Sbjct: 216 MMTAGLITVGGEELVFEAFSTMIRHGIRRLVVVDENEKPRGLLQERDMLSA 266



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 23/178 (12%), Positives = 55/178 (30%), Gaps = 26/178 (14%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           + S   Q      ++  L+                 +     +           +  V  
Sbjct: 167 SASEAAQTMRERGVSACLVGDAAQVAGILTEKDVVAQAARGTLDVRVGEMMTAGLITVGG 226

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + +A + +       + VVDE +K +G++ E D+     ++   LS  ++       
Sbjct: 227 EELVFEAFSTMIRHGIRRLVVVDENEKPRGLLQERDMLSARGENPLHLS-GEIAS----- 280

Query: 296 ILEDTLLTVA-----MQLL----RQHNISVLMVVDDCQKAIGIVHFLD--LLR-FGII 341
               +   +A     ++L+        I      +   + +   H  D  L+R  G++
Sbjct: 281 --AQSFAALAQCFERLRLMVLRSAAERIGA----EKVGRFVA--HIHDQILVRVAGLV 330



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              L+V  + + +P  +      + A Q +R+  +S  +V D  Q   GI+   D++
Sbjct: 146 FLRLAVGSIGLNDPVFVPASMSASEAAQTMRERGVSACLVGDAAQ-VAGILTEKDVV 201


>gi|220918425|ref|YP_002493729.1| IMP dehydrogenase family protein [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956279|gb|ACL66663.1| IMP dehydrogenase family protein [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 478

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +   P     G  P  SA M    G  +A  +           D  +         + 
Sbjct: 32  LEVDLRPVDFAGGSHPVVSANMNAVTGKRMAETMARLGGLGVLPQDMSLE----TAARII 87

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                V    D+   V     L D   I+ ++    V VVD+ ++  GI+T  D+     
Sbjct: 88  QHIRSVDPRHDTPLSVSPRATLRDVQGIIRKRAHDMVVVVDDERRPVGIVTHADLR---D 144

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  +      M      +   T    A   + +  +    VVD   + +G++   D +R
Sbjct: 145 QDQYS-PAASFMSSRLVTLPAGTPNREAFLRMEEQRVKAAPVVDGAGRLVGVLTRDDAVR 203

Query: 338 F 338
            
Sbjct: 204 L 204


>gi|255570875|ref|XP_002526389.1| conserved hypothetical protein [Ricinus communis]
 gi|223534251|gb|EEF35965.1| conserved hypothetical protein [Ricinus communis]
          Length = 206

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  ++    G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 74  WCTTEDTVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVG 133

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + V++D    +G++   D++R 
Sbjct: 134 DIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVINDKDM-VGMLSIGDVVRA 186



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V++
Sbjct: 111 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVTPDTKVLRAMQLMTDNRIRHIPVIN 170

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   + G+++ GD+ R  
Sbjct: 171 DKD-MVGMLSIGDVVRAV 187


>gi|146329735|ref|YP_001209295.1| inosine-5'-monophosphate dehydrogenase [Dichelobacter nodosus
           VCS1703A]
 gi|146233205|gb|ABQ14183.1| inosine-5'-monophosphate dehydrogenase [Dichelobacter nodosus
           VCS1703A]
          Length = 484

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 43/182 (23%), Positives = 61/182 (33%), Gaps = 16/182 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  SA M       LAIAL +          V+H           
Sbjct: 27  VDLKVKIARGITLNIPVLSAAMDTVSESRLAIALAQMGGI-----AVIHKNMSPQRQAAE 81

Query: 220 ASDVMHSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V      I    +       + +   I+SE  F  + V+ E  KL GI+T  DI   
Sbjct: 82  VRKVKRFESGIVRDPLTTSADVTIGEVRRIISEHNFSGLPVL-ENGKLIGIVTRRDIRYT 140

Query: 276 FHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                +   V +VM        + E         LL+ H I  L++VDD     G+V   
Sbjct: 141 ----EDDKKVREVMTTQEKLITVKEGASQQEIKALLQNHRIEKLLMVDDNFALKGLVTVK 196

Query: 334 DL 335
           DL
Sbjct: 197 DL 198


>gi|320161289|ref|YP_004174513.1| hypothetical protein ANT_18870 [Anaerolinea thermophila UNI-1]
 gi|319995142|dbj|BAJ63913.1| hypothetical protein ANT_18870 [Anaerolinea thermophila UNI-1]
          Length = 146

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN-TLSVEDV 288
           V     L +A+ +++EK  G V V+ E  ++ GI +E D  R+   F + L+  + V  +
Sbjct: 18  VSPEMTLREALKLMAEKHIGAVPVL-ENGQVVGIFSERDFARHAVEFSECLDLEVPVRQL 76

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M      +  +  +   M ++    +  L V+    K IG++   D+++
Sbjct: 77  MTHPVYYVNLEQTVDECMAVMTAKKLRHLPVI-QEGKLIGLISIGDVVK 124



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +  L  A++L+ + +I  + V+ +  + +GI    D  R
Sbjct: 17  TVSPEMTLREALKLMAEKHIGAVPVL-ENGQVVGIFSERDFAR 58



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/85 (21%), Positives = 35/85 (41%), Gaps = 2/85 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           FSE DF   H       L +           +  V +   + + + +++ K+   + V+ 
Sbjct: 51  FSERDFAR-HAVEFSECLDLEVPVRQLMTHPVYYVNLEQTVDECMAVMTAKKLRHLPVIQ 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
           E  KL G+I+ GD+ ++   D    
Sbjct: 110 E-GKLIGLISIGDVVKHILADKQNT 133


>gi|300694604|ref|YP_003750577.1| transcriptional regulator, hexr [Ralstonia solanacearum PSI07]
 gi|299076641|emb|CBJ35979.1| putative transcriptional regulator, hexR [Ralstonia solanacearum
           PSI07]
          Length = 281

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L++L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 110 RILQDTIDALAALRDRLDPR---ALDAAVALVEAAQ-RIDLYGFGSSGVVARDAQTKFFR 165

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 166 YGIAANAYSDPYLVSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 224

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 225 GSRLAALADVTLPASVEAD 243


>gi|259048099|ref|ZP_05738500.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
           49175]
 gi|259035160|gb|EEW36415.1| acetoin utilization protein AcuB [Granulicatella adiacens ATCC
           49175]
          Length = 213

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 51/126 (40%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------ 272
           +   ++  V     ++ A+ ++ E     + VV E  KL G++TE  +            
Sbjct: 6   YMSTNVITVTPETTVMKALDLMKEHDIHRLPVV-EDGKLVGLLTEELVAGHSPSMATSLS 64

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN  +  ++M K    +   TLL  A  L+RQ  + VL VVD      GI+  
Sbjct: 65  MHELNYLLNKTTASEIMQKQVLTVKAHTLLEEAASLMRQQKVGVLPVVDARGHVEGIITD 124

Query: 333 LDLLRF 338
            D+   
Sbjct: 125 KDIFDA 130



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+D M  N   +  +T +  A+ L+++H+I  L VV +  K +G++ 
Sbjct: 3   VKDYMSTNVITVTPETTVMKALDLMKEHDIHRLPVV-EDGKLVGLLT 48



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 27/44 (61%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    L +A +++ +++ G + VVD    ++GIIT+ DIF  F
Sbjct: 88  VKAHTLLEEAASLMRQQKVGVLPVVDARGHVEGIITDKDIFDAF 131


>gi|168184133|ref|ZP_02618797.1| transcriptional regulator, RpiR family [Clostridium botulinum Bf]
 gi|237794699|ref|YP_002862251.1| RpiR family transcriptional regulator [Clostridium botulinum Ba4
           str. 657]
 gi|182672732|gb|EDT84693.1| transcriptional regulator, RpiR family [Clostridium botulinum Bf]
 gi|229263372|gb|ACQ54405.1| transcriptional regulator, RpiR family [Clostridium botulinum Ba4
           str. 657]
          Length = 281

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KVIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|171185956|ref|YP_001794875.1| CBS domain-containing protein [Thermoproteus neutrophilus V24Sta]
 gi|170935168|gb|ACB40429.1| CBS domain containing membrane protein [Thermoproteus neutrophilus
           V24Sta]
          Length = 282

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 51/105 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K   P+ + I++     FG + +VDE  +L GI TE D+ +   +      V DVM +  
Sbjct: 95  KPDTPVGEVISLFLRHNFGSMPIVDEAGRLLGIFTEWDVLKIASELDFPHRVRDVMTRIV 154

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+   + +   ++ +  +      +VD+  K + ++H  DLLRF
Sbjct: 155 YVLTPYSTVMDVLEGITIYKFRRYPIVDETGKVVAMLHAKDLLRF 199



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 55/135 (40%), Gaps = 14/135 (10%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN- 275
                 +  +  ++  V+ G  +++AI  +       + ++  G KL GIIT  D+    
Sbjct: 3   MFTRPVIEFATRNVVSVQEGEKVVNAIKTMVNLDIRRLPIL-RGDKLVGIITMLDVLDAI 61

Query: 276 ------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                        + D+   SV ++  ++      DT +   + L  +HN   + +VD+ 
Sbjct: 62  YSWVSDKNAEGSLYSDIYMKSVAEIGTRSVITAKPDTPVGEVISLFLRHNFGSMPIVDEA 121

Query: 324 QKAIGIVHFLDLLRF 338
            + +GI    D+L+ 
Sbjct: 122 GRLLGIFTEWDVLKI 136



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----L 280
               + ++     ++D +  ++  +F    +VDE  K+  ++   D+ R F  D     +
Sbjct: 150 MTRIVYVLTPYSTVMDVLEGITIYKFRRYPIVDETGKVVAMLHAKDLLRFFAADETIDKI 209

Query: 281 NTLSVEDVMI-------KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVH 331
              +V++V+        K+P   +     +   ++ + ++++  + VV++     +G+V 
Sbjct: 210 KQGAVDEVLNSYAINIAKSPIFLVKAGDPVVDVIRKMLEYDVGGVPVVNEEGTAVVGMVT 269

Query: 332 FLDLL 336
              L+
Sbjct: 270 EKTLM 274



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+ T  V +   +N   + E   +  A++ +   +I  L ++    K +GI+  LD+L  
Sbjct: 2   DMFTRPVIEFATRNVVSVQEGEKVVNAIKTMVNLDIRRLPIL-RGDKLVGIITMLDVLDA 60


>gi|170288018|ref|YP_001738256.1| CBS domain-containing protein [Thermotoga sp. RQ2]
 gi|170175521|gb|ACB08573.1| CBS domain containing protein [Thermotoga sp. RQ2]
          Length = 863

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +   ++ +       VV EG +L GI+T+  + +  +  L    V
Sbjct: 308 MSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVTKKAVEKAMNHGLGDRPV 366

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M  N  V   DT +T   +L+ +H I  + ++ +    +GIV   D+LR 
Sbjct: 367 KSIMSTNLVVATPDTSVTRLRELMVEHAIGRIPIL-ENGILVGIVTRSDVLRA 418



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R     +  L   D+M    KV+L +  +    +L++Q   S   VV +  + +GIV 
Sbjct: 291 LNRLHDHVVPLLRARDIMSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVT 349



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +      G        +M +   + +      +     ++ E   G + ++ E   L 
Sbjct: 351 KAVEKAMNHGLGDRPVKSIMSTN--LVVATPDTSVTRLRELMVEHAIGRIPIL-ENGILV 407

Query: 265 GIITEGDIFRNF 276
           GI+T  D+ R  
Sbjct: 408 GIVTRSDVLRAI 419


>gi|150020570|ref|YP_001305924.1| signal transduction protein [Thermosipho melanesiensis BI429]
 gi|149793091|gb|ABR30539.1| putative signal transduction protein with CBS domains [Thermosipho
           melanesiensis BI429]
          Length = 147

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 23/122 (18%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
           V     +   + ILS +    V VV+E  K+ G I+E DI R                  
Sbjct: 14  VLEDESVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAALPSYFSLLQTASFIPD 73

Query: 278 --------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                   K ++  SV ++M K   VI EDT L  A  L+ +H++ +L VVDD ++ +G+
Sbjct: 74  LNQFVRSLKKISNKSVSEIMTKPAIVIKEDTPLLHAADLMIRHSLKILPVVDDGERLVGV 133

Query: 330 VH 331
           + 
Sbjct: 134 IT 135



 Score = 46.4 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 34/58 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V+D  I++   +LED  ++  +++L +  I+ + VV++  K +G +   D++R  +
Sbjct: 1   MKVKDFYIRDITAVLEDESVSRVLKILSRQEITGVPVVNEDYKVVGFISENDIIRAAL 58



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                 S          ++K   PL+ A  ++       + VVD+G++L G+IT
Sbjct: 82  KKISNKSVSEIMTKPAIVIKEDTPLLHAADLMIRHSLKILPVVDDGERLVGVIT 135


>gi|15643478|ref|NP_228524.1| tRNA nucleotidyl transferase-related protein [Thermotoga maritima
           MSB8]
 gi|4981239|gb|AAD35797.1|AE001742_12 tRNA nucleotidyl transferase-related protein [Thermotoga maritima
           MSB8]
          Length = 863

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +   ++ +       VV EG +L GI+T+  + +  +  L    V
Sbjct: 308 MSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVTKKAVEKAMNHGLGDRPV 366

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M  N  V   DT +T   +L+ +H I  + ++ +    +GIV   D+LR 
Sbjct: 367 KSIMSTNLVVASPDTPVTRLRELMVEHAIGRIPIL-ENGILVGIVTRSDVLRA 418



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R     +  L   D+M    KV+L +  +    +L++Q   S   VV +  + +GIV 
Sbjct: 291 LNRLHDHVVPLLRARDIMSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVT 349



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +      G        +M +   + +     P+     ++ E   G + ++ E   L 
Sbjct: 351 KAVEKAMNHGLGDRPVKSIMSTN--LVVASPDTPVTRLRELMVEHAIGRIPIL-ENGILV 407

Query: 265 GIITEGDIFRNF 276
           GI+T  D+ R  
Sbjct: 408 GIVTRSDVLRAI 419


>gi|271966205|ref|YP_003340401.1| hypothetical protein Sros_4839 [Streptosporangium roseum DSM 43021]
 gi|270509380|gb|ACZ87658.1| CBS domain containing membrane protein [Streptosporangium roseum
           DSM 43021]
          Length = 232

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 46/149 (30%), Gaps = 29/149 (19%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +           +  V    P  D   +L       + VVD    + G+++E D+ R   
Sbjct: 1   MRVEVKDVMTTQVSSVNGSTPFKDVAEVLIAHGVSALPVVDGEGHVIGVVSEADLLRKEE 60

Query: 278 -----------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                                           +  +   +M      I     +  A++L
Sbjct: 61  FRERYYREGYRPPLRARLRHRLSQEGTDGGKAHGDTAAQLMTAPAVTIGPRASIVTAVRL 120

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +H +  L VVDD     GIV   DLL+
Sbjct: 121 MEEHGVKRLPVVDDAGLLEGIVSRRDLLK 149



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 14/83 (16%), Positives = 31/83 (37%), Gaps = 2/83 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           + L   G  G      +           +     ++ A+ ++ E     + VVD+   L+
Sbjct: 80  HRLSQEGTDGGKAHGDTAAQLMTAPAVTIGPRASIVTAVRLMEEHGVKRLPVVDDAGLLE 139

Query: 265 GIITEGDIFRNFHKDLNTLSVED 287
           GI++  D+ + F +      + D
Sbjct: 140 GIVSRRDLLKVFVR--RDADIAD 160


>gi|126458961|ref|YP_001055239.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248682|gb|ABO07773.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 145

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + +   I++EK+ G V +VD+ Q     G+++E DI R   K +N    V  +M  
Sbjct: 16  PDAKIKEVARIMAEKKIGLVVIVDKSQPDVAVGVVSERDIVRAVAKGVNLDGPVSAIMST 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  D  +    +++RQHNI   +VV    K  G++   DL+
Sbjct: 76  PVITVEGDEPVWKVAEVMRQHNIRH-VVVTRGGKLYGVISIRDLV 119



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +  E +  + P     D  +    +++ +  I ++++VD  Q   A+G+V   D++R 
Sbjct: 1   MKAETIARRPPITATPDAKIKEVARIMAEKKIGLVVIVDKSQPDVAVGVVSERDIVRA 58


>gi|323701536|ref|ZP_08113209.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323533545|gb|EGB23411.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 145

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
              ++  V     + +A  ++S+   G + VV E  K  GI+T+ DI  R   +  N  +
Sbjct: 9   MTKTVATVSPQQSVQEAAQLMSQNNVGAIPVV-ENSKCVGIVTDRDIALRAVSQGQNPQS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V+ VM         +  +  A  L+ +  +  L VV +  +  GIV   DL
Sbjct: 68  TTVQSVMSTGLVTGTPEMGVHEAANLMAEKQVRRLPVV-ENGQLTGIVALGDL 119



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
             +++D+M K    +     +  A QL+ Q+N+  + VV++  K +GIV   D+ LR 
Sbjct: 2   AKTLKDIMTKTVATVSPQQSVQEAAQLMSQNNVGAIPVVENS-KCVGIVTDRDIALRA 58


>gi|196249708|ref|ZP_03148405.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
 gi|196211002|gb|EDY05764.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
          Length = 285

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 7/180 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            N+  +  ++     K  + +  ++L      +   A E +   + RVV  G+G S    
Sbjct: 93  PNAPYELFMKVTYVNKAAIEATTTTLDKR---ELEKAAEAMMKAE-RVVFYGVGGSAAAA 148

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
              +      G  +            +  +   D+ + +S SG + ++  I  +A++   
Sbjct: 149 VDASYKFTKLGYMAATSPDFHTMLPLVAHLKEGDVFVAISTSGRTKDVLEIARFAKKQQA 208

Query: 140 PLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT  ++ S +   ADI L LP   +    G     S ++QL + DAL + +     
Sbjct: 209 TVIAITKLDSASPLYKEADIRLALPDVEQDHRIG--SMASRMVQLNVIDALYLIMFHRVG 266


>gi|148980339|ref|ZP_01816005.1| hypothetical protein VSWAT3_23654 [Vibrionales bacterium SWAT-3]
 gi|145961281|gb|EDK26592.1| hypothetical protein VSWAT3_23654 [Vibrionales bacterium SWAT-3]
          Length = 620

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS-VE 286
            + +VK    +      +  +R    AV+ EG+ + G+IT+ D+  R     ++T + + 
Sbjct: 165 QVAIVKSEQTIQSVAVEMLHQR-SPCAVIYEGETIVGLITDRDMTKRVIAHGVSTENLIS 223

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +VM  +P  +  D L+  A  ++ Q NI  L VV    K +G++    L++
Sbjct: 224 EVMTHSPLTVKPDDLVLHAASIMMQFNIRNLPVV-KENKVVGLLTTSHLVQ 273


>gi|297624020|ref|YP_003705454.1| putative signal transduction protein with CBS domains [Truepera
           radiovictrix DSM 17093]
 gi|297165200|gb|ADI14911.1| putative signal transduction protein with CBS domains [Truepera
           radiovictrix DSM 17093]
          Length = 138

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK 291
           +   +++A  +L  +  GC+ VV EG K  GI+T+ DI        +D  T +VE+VM  
Sbjct: 16  LRASVLEAAELLRARNVGCLVVV-EGGKPCGILTDRDIALRVVAAGRDPKTTAVEEVMTP 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            P V+ E+  L  A+++++   +    VVD   +  G     D+L
Sbjct: 75  RPTVLEEELGLFEALEIMKDRGVRRFPVVDRYGQLSGFFTLDDVL 119


>gi|229828405|ref|ZP_04454474.1| hypothetical protein GCWU000342_00466 [Shuttleworthia satelles DSM
           14600]
 gi|229792999|gb|EEP29113.1| hypothetical protein GCWU000342_00466 [Shuttleworthia satelles DSM
           14600]
          Length = 490

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 62/171 (36%), Gaps = 16/171 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAAMDTVTEHRMAIAMARQGGIG-----IIHKNMSIAQQAEEVDKVKRSENGVIT 95

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKDLNTLSVE 286
               +     L DA  ++ + R   V + ++G   KL GIIT  D+   F +D  T  + 
Sbjct: 96  EPFALTPDHTLADADALMGKYRISGVPITEDGKTGKLIGIITNRDLK--FEEDF-TKKIS 152

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VM              L  A ++L +     L +VDD     G++   D+
Sbjct: 153 EVMTTGDQLITAKVGVTLAEAKEILGKARKEKLPIVDDHFNLRGLITIKDI 203


>gi|197123641|ref|YP_002135592.1| inosine 5-monophosphate dehydrogenase [Anaeromyxobacter sp. K]
 gi|196173490|gb|ACG74463.1| IMP dehydrogenase family protein [Anaeromyxobacter sp. K]
          Length = 478

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 59/181 (32%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +   P     G  P  SA M    G  +A  +           D  +         + 
Sbjct: 32  LEVDLRPVDFAGGSHPVVSANMNAVTGKRMAETMARLGGLGVLPQDMSL----DTAARII 87

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                V    D+   V     L D   I+ ++    V VVD+ ++  GI+T  D+     
Sbjct: 88  QHIRSVDPRHDTPLSVSPRATLRDVQGIIRKRAHDMVVVVDDERRPVGIVTHADLR---D 144

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  +      M      +   T    A   + +  +    VVD   + +G++   D +R
Sbjct: 145 QDQYS-PAASFMSSRLVTLPAGTPNREAFLRMEEQRVKAAPVVDGAGRLVGVLTRDDAVR 203

Query: 338 F 338
            
Sbjct: 204 L 204


>gi|221309365|ref|ZP_03591212.1| hypothetical protein Bsubs1_08271 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221313692|ref|ZP_03595497.1| hypothetical protein BsubsN3_08207 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221318614|ref|ZP_03599908.1| hypothetical protein BsubsJ_08141 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221322888|ref|ZP_03604182.1| hypothetical protein BsubsS_08252 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|2339998|emb|CAB11348.1| YlbB protein [Bacillus subtilis subsp. subtilis str. 168]
          Length = 150

 Score = 81.5 bits (200), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + VVDE  + L GI+T+ D+       K  N+  + D M + P  
Sbjct: 21  VYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGIAIKKPNSQKITDAMTEKPVS 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ED  +   + L+  H +  + V    +K  GIV   DL
Sbjct: 81  VEEDASVDEVLHLMASHQLRRIPVT-KNKKLTGIVTLGDL 119



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
             ++D+M  + +       +  A   ++  N+  + VVD+  +  +GIV   DL+  GI
Sbjct: 2   TKIKDLMTADLQYCTVLDNVYEAAVKMKDANVGAIPVVDEDGETLVGIVTDRDLVLRGI 60


>gi|327252082|gb|EGE63754.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           STEC_7v]
          Length = 284

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 90  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 146

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 147 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEILLCAEAARK 206

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 207 QGATVIAITSLTDSSLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 263


>gi|281411943|ref|YP_003346022.1| Polynucleotide adenylyltransferase region [Thermotoga naphthophila
           RKU-10]
 gi|281373046|gb|ADA66608.1| Polynucleotide adenylyltransferase region [Thermotoga naphthophila
           RKU-10]
          Length = 863

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +   ++ +       VV EG +L GI+T+  + +  +  L    V
Sbjct: 308 MSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVTKKAVEKAMNHGLGDRPV 366

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M  N  V   DT +T   +L+ +H I  + ++ +    +GIV   D+LR 
Sbjct: 367 KSIMSTNLVVATPDTSVTRLRELMVEHAIGRIPIL-ENGILVGIVTRSDVLRA 418



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R     +  L   D+M    KV+L +  +    +L++Q   S   VV +  + +GIV 
Sbjct: 291 LNRLHDHVVPLLRARDIMSSPVKVVLSNMTIKEVDRLMKQTGHSGFPVV-EGNRLVGIVT 349



 Score = 36.4 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 24/72 (33%), Gaps = 3/72 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +      G        +M +   + +      +     ++ E   G + ++ E   L 
Sbjct: 351 KAVEKAMNHGLGDRPVKSIMSTN--LVVATPDTSVTRLRELMVEHAIGRIPIL-ENGILV 407

Query: 265 GIITEGDIFRNF 276
           GI+T  D+ R  
Sbjct: 408 GIVTRSDVLRAI 419


>gi|148269360|ref|YP_001243820.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
 gi|147734904|gb|ABQ46244.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
          Length = 863

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     + +   ++ +       VV EG +L GI+T+  + +  +  L    V
Sbjct: 308 MSSPVKVVLSDMTIGEVDRLMKQTGHSGFPVV-EGNRLVGIVTKKAVEKAMNHGLGDRPV 366

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M  N  V   DT +T   +L+ +H I  + ++ +    +GIV   D+LR 
Sbjct: 367 KSIMSTNLVVATPDTPVTRLRELMVEHAIGRIPIL-ENGILVGIVTRSDVLRA 418



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           L   D+M    KV+L D  +    +L++Q   S   VV +  + +GIV 
Sbjct: 302 LRARDIMSSPVKVVLSDMTIGEVDRLMKQTGHSGFPVV-EGNRLVGIVT 349



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +      G        +M +   + +     P+     ++ E   G + ++ E   L 
Sbjct: 351 KAVEKAMNHGLGDRPVKSIMSTN--LVVATPDTPVTRLRELMVEHAIGRIPIL-ENGILV 407

Query: 265 GIITEGDIFRNF 276
           GI+T  D+ R  
Sbjct: 408 GIVTRSDVLRAI 419


>gi|114766379|ref|ZP_01445361.1| inosine-5'-monophosphate dehydrogenase [Pelagibaca bermudensis
           HTCC2601]
 gi|114541412|gb|EAU44459.1| inosine-5'-monophosphate dehydrogenase [Roseovarius sp. HTCC2601]
          Length = 482

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAITMAQAGGIGVIHKNLTVEEQAQQVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +     F    VVDE + + GI+T  D+        +   V  +M 
Sbjct: 99  T---PDQTLADAKALTERYGFTGFPVVDEKKHVVGIVTNRDMRFA---QKDDTPVRVMMT 152

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +N  ++ E      A+ L+R   I  L+V D   K  G++   D
Sbjct: 153 SENLAILQEPADRDEAISLMRARRIEKLLVTDAAGKLTGLLTLKD 197



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++  +   VVD+ +  +GIV   D+
Sbjct: 94  NPVTLTPDQTLADAKALTERYGFTGFPVVDEKKHVVGIVTNRDM 137


>gi|323967861|gb|EGB63273.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli M863]
          Length = 285

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALLDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEILLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLTDSSLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|294635256|ref|ZP_06713758.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
 gi|291091373|gb|EFE23934.1| transcriptional regulator, RpiR family [Edwardsiella tarda ATCC
           23685]
          Length = 294

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A+  +++E   L  +          Q   AV+ I+     + I G+G SG     + 
Sbjct: 113 LQNAINCVLSETLNLLDMA---------QVQAAVDAIRQANT-LFICGVGSSGITAEDMK 162

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           + L   G            +    ++   D+ I +S SG+S E    L  AR      IA
Sbjct: 163 NKLMRIGYRVNSTSNNHFMYMQATLLQAGDVAIAISHSGASPETVQTLKLAREAGACTIA 222

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T    S +  +ADI L    +            +   QL + D L   L+++
Sbjct: 223 LTHNLGSALMRYADISLINGNQQGKLQGDSI--GTKTAQLFVLDLLYTLLVQA 273


>gi|319775906|ref|YP_004138394.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           F3047]
 gi|329123761|ref|ZP_08252321.1| inosine-5'-monophosphate dehydrogenase [Haemophilus aegyptius ATCC
           11116]
 gi|317450497|emb|CBY86714.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           F3047]
 gi|327469960|gb|EGF15425.1| inosine-5'-monophosphate dehydrogenase [Haemophilus aegyptius ATCC
           11116]
          Length = 488

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 42  NIPMLSAAMDTITETKLAISLAQEGGIGFIHKNMTIERQADRVRKVKKFESGIV---TEP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++    F    VVD    L GIIT  D    F KDLN  +V  VM 
Sbjct: 99  VTVSPNLTLAELAEMVKINGFAGYPVVDSENNLIGIITGRDTR--FVKDLNQ-TVSQVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       + L+ QH +  +++V+   K  G++   D  + 
Sbjct: 156 KKDRLVTVKEGATREEILALMHQHRVEKVLMVNGSFKLKGMITVKDFQKA 205


>gi|229083952|ref|ZP_04216254.1| CBS domain protein [Bacillus cereus Rock3-44]
 gi|228699357|gb|EEL52040.1| CBS domain protein [Bacillus cereus Rock3-44]
          Length = 139

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT 282
                I        + +A   + E+  G + VV E  ++ G++T+ D+       K   +
Sbjct: 7   CMSTDIVQCTPLDNVYEAAVKMKEEDIGMIPVV-ENNQVVGLVTDRDLVVRGIAEKHPGS 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +VM      +  +  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 66  NKITNVMTTGIVYVSPNDPIEKATELMAQHQIRRLPVV-ENGQLVGMLALGDL 117



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M  +         +  A   +++ +I ++ VV +  + +G+V   DL+  GI
Sbjct: 2   TTVRECMSTDIVQCTPLDNVYEAAVKMKEEDIGMIPVV-ENNQVVGLVTDRDLVVRGI 58


>gi|333016049|gb|EGK35381.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-227]
          Length = 285

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|126740209|ref|ZP_01755898.1| CBS domain protein [Roseobacter sp. SK209-2-6]
 gi|126718664|gb|EBA15377.1| CBS domain protein [Roseobacter sp. SK209-2-6]
          Length = 173

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 4/132 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                     + H G S+  +     L  A+ +L++K  G + V D    L GI++E DI
Sbjct: 28  AQENATVRKLIDHKGRSVFSITPDDTLSTAVKVLADKHIGALLVTDADGALVGILSERDI 87

Query: 273 FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R            +V + M KN +    D  L   ++ +       + V+ +  K  G+
Sbjct: 88  VRKLAATPGQTLPQTVAENMTKNVQTCSLDDQLVDVLKTMTDGRFRHIPVL-EDGKLCGM 146

Query: 330 VHFLDLLRFGII 341
           +   D++ + ++
Sbjct: 147 LTIGDVVNYRLL 158


>gi|126729797|ref|ZP_01745610.1| inosine-5'-monophosphate dehydrogenase [Sagittula stellata E-37]
 gi|126709916|gb|EBA08969.1| inosine-5'-monophosphate dehydrogenase [Sagittula stellata E-37]
          Length = 482

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AI + ++         V+H    + T       V         
Sbjct: 39  NIPLLSSAMDTVTESRMAITMAQAGGIG-----VIHKNLDVETQAREVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA  +     F    VVDE  ++ GI+T  D+        +   V  +
Sbjct: 94  NPVTLTPEQTLADAKALTERYGFSGFPVVDEKHRVVGIVTNRDMRFA---QKDETPVRAM 150

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M      ++ E      A+ L+R   I  L+V D   K  G++   D
Sbjct: 151 MTTERLAILTEPADREEAISLMRARRIEKLLVTDKNGKLTGLLTLKD 197



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  +  L  A  L  ++  S   VVD+  + +GIV   D+
Sbjct: 94  NPVTLTPEQTLADAKALTERYGFSGFPVVDEKHRVVGIVTNRDM 137


>gi|186680884|ref|YP_001864080.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
 gi|186463336|gb|ACC79137.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
          Length = 1233

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 13/113 (11%)

Query: 232 LVKIGCPLIDAITIL---------SEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDL 280
           +V    P+ID I ++         S+  F    +V E   L GI+T  D+ R     KDL
Sbjct: 22  IVLPDTPVIDVIALMNRVNSSIVESKFDFSSYVLVVEETNLIGILTLRDVIRLTGMGKDL 81

Query: 281 NTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +++ + +VM +    +   +      A+  +RQH I  L VVDD  + +G++ 
Sbjct: 82  SSVKISEVMTQPVISLGLAQAQNALTALSFMRQHCIRHLPVVDDLGQLVGLIT 134



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 7/127 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDI 272
              C ++VM +     L      +++   I+S+++  CV +V + +      G+ITE DI
Sbjct: 149 KLQCVTEVMVTEVIHAL--PTTSVLELSQIMSDRQISCVVIVAQQKAKLIPVGMITEKDI 206

Query: 273 FR-NFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            + +    D+     +DVM      I     L    QL+++  +  L VV +  +  G+V
Sbjct: 207 IKFHLQGLDIAQTQAQDVMSTPVLSITPTESLWTVHQLMQERKVRRLTVVGEQSELQGLV 266

Query: 331 HFLDLLR 337
              +LL+
Sbjct: 267 TQTNLLQ 273



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A++ + +     + VVD+  +L G+IT+  I +       L    V +VM+      L  
Sbjct: 108 ALSFMRQHCIRHLPVVDDLGQLVGLITQDRIRQVIQPVHLLKLQCVTEVMVTEVIHALPT 167

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLRF 338
           T +    Q++    IS +++V   +     +G++   D+++F
Sbjct: 168 TSVLELSQIMSDRQISCVVIVAQQKAKLIPVGMITEKDIIKF 209


>gi|307353361|ref|YP_003894412.1| CBS domain-containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
 gi|307156594|gb|ADN35974.1| CBS domain containing membrane protein [Methanoplanus petrolearius
           DSM 11571]
          Length = 280

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 50/117 (42%), Gaps = 8/117 (6%)

Query: 222 DVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            ++       +V +  P    D + IL       V V  +  +L GIIT  D+ R   + 
Sbjct: 1   MLVRDYMVEDVVSVETPGNRDDVLRILKRTGISGVPVT-KDSELVGIITRKDMLRKAEET 59

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +L    +M  +P  I  D  +  A  ++ ++N   L VVD+  +  GI+   DL+
Sbjct: 60  QLSL----LMTSDPVTIGPDATIQEAATIMDRYNFRRLPVVDE-GRLAGIISIADLI 111



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     + +A TI+    F  + VVDE  +L GII+  D+     +      +
Sbjct: 65  MTSDPVTIGPDATIQEAATIMDRYNFRRLPVVDE-GRLAGIISIADLITCVAQMKFRDEI 123

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D        + E+T L +  +++       + +++   K  GI+   DL++
Sbjct: 124 KDKFTSQTFALWEETPLPLVGRIMEISGFDAIPILNSEYKLTGIISERDLIK 175



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/133 (14%), Positives = 45/133 (33%), Gaps = 36/133 (27%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKD------------- 279
               PL     I+    F  + +++   KL GII+E D+ +    +D             
Sbjct: 135 WEETPLPLVGRIMEISGFDAIPILNSEYKLTGIISERDLIKHAMIEDSVEVSDLSNGTDD 194

Query: 280 ----------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                 L    V++ MI     + ++  ++     +++  +  L
Sbjct: 195 DEWTWESIRDMHTISFGISKVQLPDKPVKEAMITEVVAVPQNAEVSECALKMKRSRVDQL 254

Query: 318 MVVDDCQKAIGIV 330
            V++  ++ + I+
Sbjct: 255 PVINGDRRMVSIL 267



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M+++   +         +++L++  IS + V  D +  +GI+   D+LR 
Sbjct: 3   VRDYMVEDVVSVETPGNRDDVLRILKRTGISGVPVTKDSE-LVGIITRKDMLRK 55


>gi|295676801|ref|YP_003605325.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1002]
 gi|295436644|gb|ADG15814.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1002]
          Length = 486

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F + L+   V ++M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FEERLDE-PVRNIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDSFELRGLMTVKDITK 201


>gi|148254227|ref|YP_001238812.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
 gi|146406400|gb|ABQ34906.1| hypothetical protein BBta_2771 [Bradyrhizobium sp. BTAi1]
          Length = 125

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 5/102 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +++A+  + + R   V V+D+   L GI+T+GD          D     V  VM  NP  
Sbjct: 2   VVEALQKMRDNRVRSVLVIDD-GVLVGIVTQGDCAIKVLLPGLDAKQTQVGQVMTANPVT 60

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  D  L   M ++ Q     L V+D   K +G++   D+++
Sbjct: 61  VKPDHPLDGCMAMMSQRGFRHLPVLD-AGKVVGVISIGDVVK 101



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 2/64 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   VK   PL   + ++S++ F  + V+D   K+ G+I+ GD+ +N  +DL   +V
Sbjct: 54  MTANPVTVKPDHPLDGCMAMMSQRGFRHLPVLDA-GKVVGVISIGDVVKNIIRDLEH-NV 111

Query: 286 EDVM 289
           +D+M
Sbjct: 112 DDLM 115



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 10/35 (28%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  A+Q +R + +  ++V+DD    +GIV   D 
Sbjct: 1   MVVEALQKMRDNRVRSVLVIDD-GVLVGIVTQGDC 34


>gi|228989926|ref|ZP_04149903.1| Transcriptional regulator, RpiR [Bacillus pseudomycoides DSM 12442]
 gi|228769861|gb|EEM18447.1| Transcriptional regulator, RpiR [Bacillus pseudomycoides DSM 12442]
          Length = 288

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+ +      +   A + I   K +++  G+G S       A      G  +  +  
Sbjct: 110 AAIEAGITAIDKKELEKAADAILGAK-KILFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 168

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  + + D+ + LS SG + ++  +  YA R    +IAIT  +  S +   + 
Sbjct: 169 FHMMLPLVTNLKQGDIFVALSTSGRTKDVLEMAQYASRQGATVIAITKLDQSSPLYKESH 228

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL I DAL +       
Sbjct: 229 IRLCMPDVEQD--HRIASIASRMTQLNIIDALYVITFNRIG 267


>gi|21231623|ref|NP_637540.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66768255|ref|YP_243017.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|188991391|ref|YP_001903401.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris str. B100]
 gi|21113315|gb|AAM41464.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris str. ATCC 33913]
 gi|66573587|gb|AAY48997.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris str. 8004]
 gi|167733151|emb|CAP51349.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           campestris]
          Length = 485

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPAQQAGEVAKVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + I +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVIALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKK 203


>gi|300698230|ref|YP_003748891.1| HexR family transcriptional regulator [Ralstonia solanacearum
           CFBP2957]
 gi|299074954|emb|CBJ54523.1| putative transcriptional regulator, hexR [Ralstonia solanacearum
           CFBP2957]
          Length = 286

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 56/139 (40%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L++L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 115 RILQDTIDALTALRDRLDPR---ALDAAVALVEAAR-RIDLYGFGSSGVVARDAQTKFFR 170

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 171 YGIAANAYSDPYLVSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 229

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 230 GSRLAALADVTLPASVEAD 248


>gi|256823048|ref|YP_003147011.1| inosine-5'-monophosphate dehydrogenase [Kangiella koreensis DSM
           16069]
 gi|256796587|gb|ACV27243.1| inosine-5'-monophosphate dehydrogenase [Kangiella koreensis DSM
           16069]
          Length = 487

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 63/179 (35%), Gaps = 11/179 (6%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFV 218
            L  +  S      P  SA M       LAIAL +     F   +  +      +  +  
Sbjct: 28  DLRTKITSEYTLNIPLVSAAMDTVTESRLAIALAQEGGMGFIHKNMTIEQQAEHVRRVKK 87

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S ++        +     +     +  E     + VVD G +L GI+T  DI   F  
Sbjct: 88  FESGIV---SDPITITPDITIGQVKQMTREHGISGMPVVD-GNQLVGIVTNRDIR--FET 141

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +L+   V  VM        + E+         L +  I  L+VV+D  +  G++   D+
Sbjct: 142 NLDK-PVSKVMTPKERLVTVKEEASQEEIYDKLHEFRIEKLLVVNDNFELKGLITVKDI 199


>gi|166712872|ref|ZP_02244079.1| hypothetical protein Xoryp_15860 [Xanthomonas oryzae pv. oryzicola
           BLS256]
          Length = 135

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +I+AI +++EK  G V V+D G +L GI++E D  R      +  +T SV ++M
Sbjct: 11  VASDAAVIEAIGLMAEKAVGAVLVMD-GPRLVGIVSERDYARKVVLRDRSSSTTSVAEIM 69

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +     +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 70  SAEVVTVSPSDTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 117



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D+                S        +  V     +   + ++++ RF  + VV E
Sbjct: 45  SERDYA--RKVVLRDRSSSTTSVAEIMSAEVVTVSPSDTVERCMQLMTDGRFRHLPVV-E 101

Query: 260 GQKLKGIITEGDIFRNF 276
             +++G+I+ GD+ +  
Sbjct: 102 NGRVQGVISIGDLVKAV 118


>gi|148976950|ref|ZP_01813605.1| putative sugar-phosphate nucleotide transferase [Vibrionales
           bacterium SWAT-3]
 gi|145963824|gb|EDK29084.1| putative sugar-phosphate nucleotide transferase [Vibrionales
           bacterium SWAT-3]
          Length = 353

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              ++     L DA+ I+  +      VV+  Q L G++T+GDI R      N    V D
Sbjct: 6   KKAILSPSATLKDALQIIDSEALRGALVVNSSQALLGVVTDGDIRRGLLSGKNLEAPVAD 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM ++P     ++     ++ + + +I  + +VDD  + +G+    
Sbjct: 66  VMNRSPMTANSESSREYLIEQMNKLDILFIPIVDD-GRLVGLETLH 110


>gi|114320174|ref|YP_741857.1| inosine-5'-monophosphate dehydrogenase [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226568|gb|ABI56367.1| inosine-5'-monophosphate dehydrogenase [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 488

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/206 (20%), Positives = 71/206 (34%), Gaps = 18/206 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  H+ ++   + L  +        AP  SA M       LAIAL E    
Sbjct: 7   ALTFDDVLLLPAHSAVLPRDVDLSTQLTRGIRLRAPIVSAAMDTVTEARLAIALAEQGGI 66

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V             V     + + + +        V 
Sbjct: 67  G-----IVHKNMTVAQQANEVRRVKKFESGVIKEPITVSPRTTIREVLELTRANGISGVP 121

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHN 313
           VVD G+ L GI+T  D+   F   L+   V   M        + E       +  L  + 
Sbjct: 122 VVD-GEDLVGIVTSRDLR--FETRLDE-PVSVAMTPRERLVTVTEGADREEILSKLHGNR 177

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRFG 339
           I  ++VVDD     G+V   D+ +  
Sbjct: 178 IEKVLVVDDAFHLRGMVTVKDIQKAK 203


>gi|290579979|ref|YP_003484371.1| putative acetoin utilization protein [Streptococcus mutans NN2025]
 gi|254996878|dbj|BAH87479.1| putative acetoin utilization protein [Streptococcus mutans NN2025]
          Length = 219

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ EK    + V+ E   L G++TEG I                +  L
Sbjct: 14  ISPDTTVAKATDIMREKNLRRLPVI-ENDVLVGLLTEGTIADANPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N     DVMIK+   + +D  L  A+ ++ +H I VL VVD   +  GI+   D+ R 
Sbjct: 73  NKTKARDVMIKDVITVSKDARLEDAIYIMMKHKIGVLPVVD-GNQMSGIITDKDVFRA 129



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M +    I  DT +  A  ++R+ N+  L V+++    +G++ 
Sbjct: 1   MPVKDFMTRRVVYISPDTTVAKATDIMREKNLRRLPVIEND-VLVGLLT 48



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI I+ + + G + VVD G ++ GIIT+ D+FR F
Sbjct: 81  MIKDVITVSKDARLEDAIYIMMKHKIGVLPVVD-GNQMSGIITDKDVFRAF 130


>gi|302878069|ref|YP_003846633.1| response regulator receiver modulated diguanylate
           cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Gallionella capsiferriformans ES-2]
 gi|302580858|gb|ADL54869.1| response regulator receiver modulated diguanylate
           cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Gallionella capsiferriformans ES-2]
          Length = 1275

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 51/106 (48%), Gaps = 1/106 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           ++     + DA   +++ R   V V  E +   GI+TE DI R F +D     + +VM K
Sbjct: 141 MLSEQASVADAANAMTKSRTDYVLV-GENRCTTGILTERDIVRLFGQDDPRRVLREVMSK 199

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +   T L  A + ++   I  L+V DD  + IG++   D+++
Sbjct: 200 PVAKVARQTQLKDAAKKMQDEGIRRLVVEDDAGQVIGVLTEHDVVK 245



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 46/110 (41%), Gaps = 2/110 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LS 284
              ++  + +  P+  A  ++   +  C+ V+ E     GI+TE D+ R       T   
Sbjct: 7   MTRNVAQIDLRQPMSVATEMMQRMQISCLLVI-ENNLPVGILTERDVVRGTASGFTTAQP 65

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V ++M    + I +    + A   L +H I  L V+D+     GIV   D
Sbjct: 66  VAELMSTPLRSIEQTASKSEAYHTLIKHGIRHLRVIDEHGNTTGIVSETD 115



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++ ++M +N   I     ++VA +++++  IS L+V+ +    +GI+   D++R
Sbjct: 1   MTIANIMTRNVAQIDLRQPMSVATEMMQRMQISCLLVI-ENNLPVGILTERDVVR 54



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V     L DA   + ++    + V D+  ++ G++TE D+ +   +D
Sbjct: 197 MSKPVAKVARQTQLKDAAKKMQDEGIRRLVVEDDAGQVIGVLTEHDVVKPLEED 250


>gi|225458255|ref|XP_002281327.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 207

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 9/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNF---HKDLNTLSVE 286
             +    + DA   ++E   G + V+  G+   + GI TE D  R      +      V 
Sbjct: 75  WCRTNDTVYDAAKHMAENNIGSLVVLKPGEPKHIAGIFTERDYMRKIIAHGRSSKDTKVG 134

Query: 287 DVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M        +  DT +  AMQLL ++ I  + V+D   K +G++  +D++R 
Sbjct: 135 EIMTDENKLVTVSSDTNILQAMQLLTEYQIRHVPVID--GKIVGMISIVDIVRA 186



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 17/78 (21%), Positives = 34/78 (43%), Gaps = 2/78 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D+          +      ++M   + +  V     ++ A+ +L+E +   V V+D
Sbjct: 112 FTERDYMRKIIAHGRSSKDTKVGEIMTDENKLVTVSSDTNILQAMQLLTEYQIRHVPVID 171

Query: 259 EGQKLKGIITEGDIFRNF 276
              K+ G+I+  DI R  
Sbjct: 172 --GKIVGMISIVDIVRAV 187


>gi|323941328|gb|EGB37513.1| SIS domain-containing protein [Escherichia coli E482]
          Length = 232

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 38  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 94

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 95  LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 154

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 155 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 211


>gi|298368391|ref|ZP_06979709.1| inosine-5'-monophosphate dehydrogenase [Neisseria sp. oral taxon
           014 str. F0314]
 gi|298282394|gb|EFI23881.1| inosine-5'-monophosphate dehydrogenase [Neisseria sp. oral taxon
           014 str. F0314]
          Length = 487

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/172 (16%), Positives = 67/172 (38%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            S V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPEMQAKAVSKVKRHESGIVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
              ++     + + + + ++++     + V E  K+ GI+T  D+     ++   L V  
Sbjct: 95  DPVIIAPNVLIRELLELRAQRKRKMSGLPVVENGKVVGIVTNRDLRF---ENRLDLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        + E T +  A +L+ +H +  ++V+++  +  G++   D+L+
Sbjct: 152 IMTPRERLVTVPEGTSIDEARELMHKHKVERVLVLNEKDELKGLITVKDILK 203


>gi|291545346|emb|CBL18454.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus sp. SR1/5]
          Length = 484

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +   +++ 
Sbjct: 96  DPFYLSAEHTLKDANDLMAKYRISGVPIT-EGRKLVGIITNRDLK--FETDFSR-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 152 MTSEGLITAKEGITLEDAKKILAKSRKEKLPIVDDDFNLKGLITIKDI 199


>gi|228996117|ref|ZP_04155769.1| Transcriptional regulator, RpiR [Bacillus mycoides Rock3-17]
 gi|228763684|gb|EEM12579.1| Transcriptional regulator, RpiR [Bacillus mycoides Rock3-17]
          Length = 287

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+ +      +   A + I   K +++  G+G S       A      G  +  +  
Sbjct: 109 AAIEAGITAIDKKELEKAADAILGAK-KILFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  + + D+ + LS SG + ++  +  YA R    +IAIT  +  S +   + 
Sbjct: 168 FHMMLPLVTNLKQGDIFVALSTSGRTKDVLEMAQYASRQGATVIAITKLDQSSPLYKESH 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL I DAL +       
Sbjct: 228 IRLCMPDVEQD--HRIASIASRMTQLNIIDALYVITFNRIG 266


>gi|191168983|ref|ZP_03030750.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
 gi|190900990|gb|EDV60772.1| transcriptional regulator, RpiR family [Escherichia coli B7A]
          Length = 285

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCSLFDYARLQKIIEVICKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|327400241|ref|YP_004341080.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327315749|gb|AEA46365.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 461

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              +V     + DA  ++     G   V+    ++KGI+TEGDI R    ++  T  +  
Sbjct: 19  EPVIVHPSMSIRDAARLM--HSTGKSYVLLADVEIKGIVTEGDIKRAVANEVPVTTPLSK 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   N   I ED+ L  A+ L  ++ I  L V    +K +G++   D+L
Sbjct: 77  IATTNLITIDEDSTLFDAIVLFFKNRIRHLPV-KRGKKIVGVISINDVL 124


>gi|328477641|gb|EGF47683.1| transcriptional regulator RpiR family protein [Lactobacillus
           rhamnosus MTCC 5462]
          Length = 299

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 39/192 (20%), Positives = 75/192 (39%), Gaps = 8/192 (4%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T  G     ++++  A +++      +++LE +L      Q   +V  +     +V + G
Sbjct: 78  TTNGDVETNDNSLASARKTV---NANIAALEGTLSFLTQDQIDHSVNLLLDA-NKVALFG 133

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
            G S  I      T           +           +T  D+ IV+S +G+  ++ A++
Sbjct: 134 FGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTEHDVAIVISHTGNDTDILALV 193

Query: 132 YYARRFSIPLIAITSENKSVVACH-ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
                  +P+IA+TS   S +A   +D+  ++ ++       L   TS   QLAI D L 
Sbjct: 194 DLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRSDALISMTS---QLAIFDVLY 250

Query: 191 IALLESRNFSEN 202
             L+        
Sbjct: 251 TELVRRMGLQSE 262


>gi|302039061|ref|YP_003799383.1| hypothetical protein NIDE3782 [Candidatus Nitrospira defluvii]
 gi|300607125|emb|CBK43458.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 144

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 6/105 (5%)

Query: 237 CPLIDAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
               DA+TI   ++++ FG + VV E   L G++TE D+ +     +DL+ +   ++M  
Sbjct: 30  TARTDALTIGRLMTKQNFGGLPVVAEDGSLVGLVTEYDLLQAMIEGRDLHKVLASEIMTT 89

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            P    E+  L     L +   ++ L VV   ++ +GIV   D+L
Sbjct: 90  QPLAAQENMTLEEVANLFQDRYVTRLPVV-RGKQLVGIVARRDVL 133



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D  TL+V  +M          T      +L+ + N   L VV +    +G+V   DLL
Sbjct: 10  ACDPKTLTVGQLMQDALFTCTARTDALTIGRLMTKQNFGGLPVVAEDGSLVGLVTEYDLL 69

Query: 337 RF 338
           + 
Sbjct: 70  QA 71


>gi|229543544|ref|ZP_04432604.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus coagulans 36D1]
 gi|229327964|gb|EEN93639.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus coagulans 36D1]
          Length = 438

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 42/194 (21%), Positives = 73/194 (37%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T  ++  +   A +++T   + +     +A   S  +     D   +A + +R       
Sbjct: 125 TDAHELALRSGAAVLITGGFDTKDYVKKIADEKSLPIISTSYDTFTVATMINR------- 177

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            V      +    +   D++   +    +     + D      E       VVD   K+ 
Sbjct: 178 AVYDQ--LIKKEIILVEDILTPIEKTAYLNTTDTVQDWYRKKRETGHSRFPVVDRNLKVA 235

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GIIT  D+          LS+E VM KNP  + E T +T    ++    I +L V DD  
Sbjct: 236 GIITSKDVMET----DTHLSIEKVMTKNPITVSEKTSVTSVAHMMVWEGIEILPVTDDFN 291

Query: 325 KAIGIVHFLDLLRF 338
           +  GIV   D+L+ 
Sbjct: 292 RLRGIVSRQDVLKE 305


>gi|163783050|ref|ZP_02178045.1| tRNA (uracil-5-)-methyltransferase Gid [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159881730|gb|EDP75239.1| tRNA (uracil-5-)-methyltransferase Gid [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 569

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 53/128 (41%), Gaps = 3/128 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G   +    V         VK    +  A  ++ +   G V V + G KL GI+T+ D+
Sbjct: 437 WGLFILEKLKVRSYMKEPITVKPYDSVEKAYRVMMDNLIGGVPVAN-GGKLVGIVTKSDV 495

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIV 330
               H + + + V ++M  N  V+  +  L    +L+    +  L VVD     + +GI+
Sbjct: 496 MSVPHHERSRVRVHEIMSTNLVVVTPEDTLGDVFRLMTARGVGRLPVVDKRGSRRLVGII 555

Query: 331 HFLDLLRF 338
              D+ R 
Sbjct: 556 ARADIGRA 563



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDI 272
                         ++ +V     L D   +++ +  G + VVD+    +L GII   DI
Sbjct: 501 HERSRVRVHEIMSTNLVVVTPEDTLGDVFRLMTARGVGRLPVVDKRGSRRLVGIIARADI 560

Query: 273 FRNF 276
            R  
Sbjct: 561 GRAI 564


>gi|260427220|ref|ZP_05781199.1| inosine-5'-monophosphate dehydrogenase [Citreicella sp. SE45]
 gi|260421712|gb|EEX14963.1| inosine-5'-monophosphate dehydrogenase [Citreicella sp. SE45]
          Length = 482

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI + ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAITMAQAGGIGVIHKNLSVEEQARQVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +     F    VVDE   + GI+T  D+        +   V  +M 
Sbjct: 99  T---PDQTLADAKALTERYGFTGFPVVDENHHVVGIVTNRDMRFA---QKDETPVRVMMT 152

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SENLAILREPADRDEAISLMKARRIEKLLVTDASGKLTGLLTLKD 197



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 20/44 (45%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++  +   VVD+    +GIV   D+
Sbjct: 94  NPVTLTPDQTLADAKALTERYGFTGFPVVDENHHVVGIVTNRDM 137


>gi|170761168|ref|YP_001786733.1| RpiR family transcriptional regulator [Clostridium botulinum A3
           str. Loch Maree]
 gi|169408157|gb|ACA56568.1| transcriptional regulator, RpiR family [Clostridium botulinum A3
           str. Loch Maree]
          Length = 281

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KVIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|153814690|ref|ZP_01967358.1| hypothetical protein RUMTOR_00905 [Ruminococcus torques ATCC 27756]
 gi|317501048|ref|ZP_07959254.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|331090284|ref|ZP_08339171.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           3_1_46FAA]
 gi|145848184|gb|EDK25102.1| hypothetical protein RUMTOR_00905 [Ruminococcus torques ATCC 27756]
 gi|316897435|gb|EFV19500.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           8_1_57FAA]
 gi|330401903|gb|EGG81478.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           3_1_46FAA]
          Length = 484

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPENTLEDANNLMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 153 TSEGLITAKEGITLEEAKRVLAKARKEKLPIVDDEGNLTGLITIKDI 199


>gi|119960797|ref|YP_946899.1| hypothetical protein AAur_1111 [Arthrobacter aurescens TC1]
 gi|119947656|gb|ABM06567.1| CBS domains protein [Arthrobacter aurescens TC1]
          Length = 144

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
              +   ++    L +A  ++ +   G + +     KL G IT+ DI        KD   
Sbjct: 8   MTTNAQCIEEDKTLQEAARLMRDMDCGSLPICGHDGKLTGFITDRDIVVKCLAEGKDARE 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++    P  +  D  +  A+ ++ +H +  L V+ D  K +GI+   D+ R
Sbjct: 68  VRASELATGKPYWVDADANVDEAVTMMEEHQVRRLPVISD-HKLVGIISQGDIAR 121



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 23/52 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M  N + I ED  L  A +L+R  +   L +     K  G +   D++
Sbjct: 4   VREFMTTNAQCIEEDKTLQEAARLMRDMDCGSLPICGHDGKLTGFITDRDIV 55



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 7/84 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G           +      V     + +A+T++ E +   + V+ +  KL GII++GDI 
Sbjct: 62  GKDAREVRASELATGKPYWVDADANVDEAVTMMEEHQVRRLPVISDH-KLVGIISQGDIA 120

Query: 274 RN------FHKDLNTLSVEDVMIK 291
           RN        + +  +S ++ M  
Sbjct: 121 RNHYAEQRLGEMVEHISAKERMSH 144


>gi|37677064|ref|NP_937460.1| signal-transduction protein [Vibrio vulnificus YJ016]
 gi|37201609|dbj|BAC97430.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
          Length = 621

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
           + ++I +VK+   + D    +  K+    AVV +G  + G++T+ D+  +     KD++ 
Sbjct: 162 ASENIAIVKVTDSIRDVAITMCGKQRSSCAVVMDGNDIVGLVTDRDMTASVVAKEKDVSE 221

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +E VM  NP +I  D  +  A+ L+ Q+NI  L VV +  K  G++    L+
Sbjct: 222 -RIESVMKLNPVLIESDAKVIQAISLMLQYNIRCLPVV-NHGKVAGLLTTTHLV 273


>gi|125526972|gb|EAY75086.1| hypothetical protein OsI_02980 [Oryza sativa Indica Group]
          Length = 310

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK-- 291
           + +AI  ++    G + V+   + ++L GI+TE D  R      +      V D+M +  
Sbjct: 185 VHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERDFARKILLPGRPSEETRVGDIMTEED 244

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +  +T +  AM+L+ + +I  + V D+  K +G++   D+++
Sbjct: 245 KLITVSSNTNILQAMELMTERHIRHVPVFDE--KVVGMITIGDVVK 288



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF          +      D+M   D +  V     ++ A+ +++E+    V V DE
Sbjct: 216 TERDFARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDE 275

Query: 260 GQKLKGIITEGDIFRNF 276
             K+ G+IT GD+ +  
Sbjct: 276 --KVVGMITIGDVVKTI 290


>gi|332089730|gb|EGI94831.1| helix-turn-helix domain, rpiR family protein [Shigella dysenteriae
           155-74]
          Length = 284

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 90  SITSDDSLEVIARKLNREKE--LALEQTCALFDFARLQKIIEVISKAP-FIQITGLGGSA 146

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 147 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 206

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 207 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 263


>gi|304404999|ref|ZP_07386659.1| transcriptional regulator, RpiR family [Paenibacillus
           curdlanolyticus YK9]
 gi|304345878|gb|EFM11712.1| transcriptional regulator, RpiR family [Paenibacillus
           curdlanolyticus YK9]
          Length = 281

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/159 (25%), Positives = 66/159 (41%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +LE++ Q         AVE++   + RV   G G S  I          +G  SF   
Sbjct: 105 IQTLENTYQILDGNAIKRAVERLVRAQ-RVHFYGTGGSAVIAMDAFHKFIRSGKQSFAFL 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T+DD+ +V+S SG++ +   IL  A       I IT   KS ++   D
Sbjct: 164 DSHFQLMSAAQLTKDDVAVVISHSGTNKDTIRILETAIENGAMTIGITGFPKSPISQKVD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L    E            S I QL++ DAL + ++ S
Sbjct: 224 VALYTSSEETEYRSEAL--ASRIGQLSLIDALYVNVMMS 260


>gi|239616437|ref|YP_002939759.1| putative signal transduction protein with CBS domains [Kosmotoga
           olearia TBF 19.5.1]
 gi|239505268|gb|ACR78755.1| putative signal transduction protein with CBS domains [Kosmotoga
           olearia TBF 19.5.1]
          Length = 318

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L  A  ++  ++   + +V+   KL GI++  DI     KD     + + M K+  
Sbjct: 35  PERTLWQAKELMKLRKISGIPIVNRDNKLLGIVSIEDIIVALEKDHIRDKIGEHMTKDVI 94

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+  D  L   +Q   ++      VVD+  K +G+V   D++  
Sbjct: 95  VLKPDEELESILQKFDRYRYGRFPVVDESGKLVGLVTKKDIISA 138



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +     K  + +   ++M KN   +  +  L  A +L++   IS + +V+   K +GIV 
Sbjct: 9   LIEKLRKFFSHIKAGEIMTKNIITMTPERTLWQAKELMKLRKISGIPIVNRDNKLLGIVS 68

Query: 332 FLDLL 336
             D++
Sbjct: 69  IEDII 73



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 27/63 (42%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H    + ++K    L   +      R+G   VVDE  KL G++T+ DI     +    + 
Sbjct: 88  HMTKDVIVLKPDEELESILQKFDRYRYGRFPVVDESGKLVGLVTKKDIISAILERFRIIY 147

Query: 285 VED 287
           V D
Sbjct: 148 VHD 150


>gi|297520546|ref|ZP_06938932.1| putative DNA-binding transcriptional regulator [Escherichia coli
           OP50]
          Length = 175

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++ ++L      + H  V  +++ + R+++TGIG SG +    A  L   G  +  V  
Sbjct: 1   AAMYATLNVNSEEKLHECVTMLRSAR-RIILTGIGASGLVAQNFAWKLMKIGFNAAAVRD 59

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
             A    +   + DDL++ +S++G   EL        R    ++AIT    + +   A  
Sbjct: 60  MHALLATVQASSPDDLLLAISYTGVRRELNLAADEMLRVGGKVLAITGFTPNALQQRASH 119

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            L    E ++     A  ++   Q  + D L IAL++ 
Sbjct: 120 CLYTIAEEQAT--NSASISACHAQGMLTDLLFIALIQQ 155


>gi|218961858|ref|YP_001741633.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) (Superoxide-inducible protein 12) (SOI12)
           [Candidatus Cloacamonas acidaminovorans]
 gi|167730515|emb|CAO81427.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) (Superoxide-inducible protein 12) (SOI12)
           [Candidatus Cloacamonas acidaminovorans]
          Length = 485

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 73/182 (40%), Gaps = 11/182 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           + L  +  +      P  S+ M      A+AIA+           +  +     ++  + 
Sbjct: 26  VDLSTKITAQISLRIPVISSAMDTVTESAMAIAMAREGGLGIIHKNLSIEEQAKQVSLVK 85

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              S ++       ++     L   + +      G   VV E + L GI+T  DI    +
Sbjct: 86  RAESGIV---THPYILSPEDTLAYVLALRDAHHIGGFPVV-ENEFLVGILTSRDIRFVTN 141

Query: 278 KDLNTLSVEDVMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  V+D+M    K+I   T   L  A++LL++H +  L+++++  K  G++   D+
Sbjct: 142 P---QTKVKDLMTPKEKLITAKTGISLDKAIELLQKHRLEKLLLINEEGKLEGMITVKDI 198

Query: 336 LR 337
           ++
Sbjct: 199 MK 200



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 30/61 (49%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                D+M   + +   K G  L  AI +L + R   + +++E  KL+G+IT  DI +  
Sbjct: 143 QTKVKDLMTPKEKLITAKTGISLDKAIELLQKHRLEKLLLINEEGKLEGMITVKDIMKRL 202

Query: 277 H 277
           +
Sbjct: 203 N 203


>gi|20090672|ref|NP_616747.1| hypothetical protein MA1821 [Methanosarcina acetivorans C2A]
 gi|19915720|gb|AAM05227.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 500

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 1/106 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D I  +K    + DA   + E  F  +AVV +  +L GI+T  DI +   +++   SV
Sbjct: 384 MADFIVTIKKNQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKAVAENIFD-SV 442

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E VM K       +  + +A + L ++ +S + V+D  +K +GI+ 
Sbjct: 443 ESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDTQRKVLGIIT 488



 Score = 43.7 bits (102), Expect = 0.043,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM      I ++  +  A + + +++ + L VV D  + +GI+   D+ + 
Sbjct: 380 VKDVMADFIVTIKKNQTVQDAAKKIWENSFNHLAVVSDTGELVGILTAWDISKA 433


>gi|120598023|ref|YP_962597.1| CBS domain-containing protein [Shewanella sp. W3-18-1]
 gi|146293905|ref|YP_001184329.1| CBS domain-containing protein [Shewanella putrefaciens CN-32]
 gi|120558116|gb|ABM24043.1| CBS domain containing protein [Shewanella sp. W3-18-1]
 gi|145565595|gb|ABP76530.1| CBS domain containing protein [Shewanella putrefaciens CN-32]
 gi|319427281|gb|ADV55355.1| CBS domain containing protein [Shewanella putrefaciens 200]
          Length = 143

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  V++   L  A  I  +  F  + VVDE  +L+G+++E D+ R           
Sbjct: 9   MSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDE-YQLEGVLSERDLLRAISPNLGSSAE 67

Query: 278 --KDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             KDL TL   V  VM ++P  +     L  A +LL  +NI  L V+++    +GIV + 
Sbjct: 68  TIKDLETLQKRVHQVMTRDPITVAPHINLDTATRLLLDNNIGCLPVLENGN-LVGIVTWK 126

Query: 334 DLLRF 338
           DLLR 
Sbjct: 127 DLLRA 131



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M      +  D  LTVA ++  Q +   L+VVD+ Q   G++   DLLR 
Sbjct: 5   IADIMSTRVVTVEMDDRLTVAKEIFDQASFHHLLVVDEYQ-LEGVLSERDLLRA 57


>gi|302392250|ref|YP_003828070.1| hypothetical protein Acear_1497 [Acetohalobium arabaticum DSM 5501]
 gi|302204327|gb|ADL13005.1| CBS domain containing protein [Acetohalobium arabaticum DSM 5501]
          Length = 141

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  +     + DA  I+++   G V V   GQK  G++T+ D  +           
Sbjct: 7   MTSDVSTIDTNSTVQDAAKIMNDLDVGIVPVC-SGQKPVGVVTDRDIVLRNTAQGGDINT 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E VM  +P     D     A QL+ +  I  L +V++    +GI+   DL
Sbjct: 66  PIEQVMSDDPVYGTPDMSPQEAAQLMSEKQIRRLPIVENDN-IVGIISLGDL 116



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++++M  +   I  ++ +  A +++   ++ ++ V    QK +G+V   D++
Sbjct: 1   MQLKNIMTSDVSTIDTNSTVQDAAKIMNDLDVGIVPVC-SGQKPVGVVTDRDIV 53


>gi|159899786|ref|YP_001546033.1| CBS domain-containing protein [Herpetosiphon aurantiacus ATCC
           23779]
 gi|159892825|gb|ABX05905.1| CBS domain containing protein [Herpetosiphon aurantiacus ATCC
           23779]
          Length = 142

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +      I  +    PL  A+ ILSE   G   VV E  ++ GII+E DI R   +D
Sbjct: 4   KHVLATKSPIIHTITPQAPLSQAVAILSEHNIG-TLVVMEDDRIVGIISERDIIRAAAQD 62

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    V+ VM  N         L   +Q +       L ++D     +GIV   D+++
Sbjct: 63  PAIFERQVQHVMTANVITGRPSDDLKAVLQTMTNRRFRHLPILDGD-ILLGIVSIGDVVK 121

Query: 338 F 338
            
Sbjct: 122 A 122


>gi|194432146|ref|ZP_03064435.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
 gi|194419675|gb|EDX35755.1| transcriptional regulator, RpiR family [Shigella dysenteriae 1012]
          Length = 285

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDFARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|299132348|ref|ZP_07025543.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
 gi|298592485|gb|EFI52685.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
          Length = 228

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 49/130 (37%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNF-------------- 276
           V     + +A  ++       + VVDE   L G+++EGD+   R                
Sbjct: 14  VLPNVHVREAAKMMVGNGISALTVVDERGSLVGLLSEGDLLHRRELNTETRRSWWLDLFA 73

Query: 277 -HKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             +DL       N+  V DVM         D  L    +   +H+I  L V+ +    IG
Sbjct: 74  SDRDLAADYVKSNSRMVRDVMTTKVLTASPDDTLGDVARRFEKHHIKRLPVI-ENGHLIG 132

Query: 329 IVHFLDLLRF 338
           I+   +L++ 
Sbjct: 133 IITRANLVQA 142



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V DVM K+   +L +  +  A +++  + IS L VVD+    +G++   DLL
Sbjct: 1   MKVRDVMTKHLVSVLPNVHVREAAKMMVGNGISALTVVDERGSLVGLLSEGDLL 54


>gi|294497778|ref|YP_003561478.1| RpiR family transcriptional regulator [Bacillus megaterium QM
           B1551]
 gi|294347715|gb|ADE68044.1| transcriptional regulator, RpiR family [Bacillus megaterium QM
           B1551]
          Length = 284

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 68/170 (40%), Gaps = 6/170 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + I      L +    +          A E I   K RV + G G S  +       L  
Sbjct: 102 KVISKSMSALMNTSRLVSTS---AIDAAAEAIHGAK-RVFLYGAGGSSVVALDAQYKLLR 157

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
               + F   +         +T+DD++ V+S SG + E+  ++  A+     +I +T   
Sbjct: 158 IDISALFSLDSHVQMVMATNMTKDDVLFVVSTSGQTKEVIELMQIAKDKGAAVILLTQHG 217

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            S  +  ADI+LT+  E +    G    ++ I QLAI DA+ I L   + 
Sbjct: 218 SSPASRLADILLTISVEEQHIRIGT--MSARIAQLAIVDAMFIRLCIQKG 265


>gi|332977111|gb|EGK13915.1| transcriptional regulator HexR [Desmospora sp. 8437]
          Length = 302

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 64/163 (39%), Gaps = 3/163 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  + ++E +LQ         AV+ +     ++   G G SG +       L  +G    
Sbjct: 123 RSNIKTIEDTLQVVDHGNLQKAVDAMLTA-NKIEFFGSGGSGIVALDAYHKLLRSGLRVS 181

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                         ++  D  +++S SG++ ++  IL  A+      I IT+  KS ++ 
Sbjct: 182 AAGDTHLQLMSASQLSDRDCAVLISHSGTTKDILQILQTAKEAGAVTIGITNFAKSPLSQ 241

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +I L    E           +S I QL + DAL + L+  R
Sbjct: 242 GVEIPLFTLSEETDYRSEAL--SSRIAQLTLIDALYVNLMIRR 282


>gi|311897879|dbj|BAJ30287.1| putative RpiR family transcriptional regulator [Kitasatospora setae
           KM-6054]
          Length = 291

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/133 (27%), Positives = 55/133 (41%), Gaps = 2/133 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R++  G+G S          L   G P+ F     A+     ++  DDL + +S SG + 
Sbjct: 138 RILAVGVGSSALAALDATQKLQRLGYPAVFASDVHAALMTAALLGPDDLALGISHSGRAR 197

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+  +L  AR        +TS  +S  A  AD+VL           G   T S   QL +
Sbjct: 198 EVVEVLEEARLAGAATAVVTSNPRSPAAAPADLVLRTAARETEFRSGG--TASRTAQLTV 255

Query: 186 GDALAIALLESRN 198
            DAL + L +  +
Sbjct: 256 VDALYVTLAQHDH 268


>gi|255533567|ref|YP_003093939.1| CBS domain-containing protein [Pedobacter heparinus DSM 2366]
 gi|255346551|gb|ACU05877.1| CBS domain containing protein [Pedobacter heparinus DSM 2366]
          Length = 142

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     ++DA+ ++ EK    + V+D G++L GI TE D  R      K     ++++VM
Sbjct: 18  VTENSSVLDALKVMMEKNISALMVLD-GKRLVGIFTERDYARKIILHGKSSAETAIKEVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              P  +L    +   M ++   +I  L V+   Q+ +G+V   D+++F
Sbjct: 77  TAQPITVLPSDGIDFCMGIMTDKHIRHLPVM-QEQQLLGMVSIGDVVKF 124


>gi|225028736|ref|ZP_03717928.1| hypothetical protein EUBHAL_03015 [Eubacterium hallii DSM 3353]
 gi|224953927|gb|EEG35136.1| hypothetical protein EUBHAL_03015 [Eubacterium hallii DSM 3353]
          Length = 483

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 58/167 (34%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPFMSASMDTVTEHQMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L  A  ++++ R   V +  E  KL GIIT  D+   F  + N    E +
Sbjct: 96  DPFYLSPEHTLQQAEDLMAKFRISGVPIT-ENGKLVGIITNRDLK--FETNFNKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A Q+L +     L +VDD     G++   D+
Sbjct: 153 TSEGLVTAKEGITLEEAKQILGKARKEKLPIVDDDYNLKGLITIKDI 199


>gi|217958303|ref|YP_002336851.1| CBS domain protein [Bacillus cereus AH187]
 gi|222094475|ref|YP_002528535.1| cbs domain protein [Bacillus cereus Q1]
 gi|217063462|gb|ACJ77712.1| CBS domain protein [Bacillus cereus AH187]
 gi|221238533|gb|ACM11243.1| CBS domain protein [Bacillus cereus Q1]
          Length = 139

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM KN   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTKNIVSVSPDDPIEKATELMAQYQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|77461406|ref|YP_350913.1| cyclic nucleotide-binding (cNMP-bd) protein [Pseudomonas
           fluorescens Pf0-1]
 gi|77385409|gb|ABA76922.1| conserved hypothetical protein [Pseudomonas fluorescens Pf0-1]
          Length = 646

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +           PL +A+ ++ E++ G +  VDE +   GI T  D+     + +     
Sbjct: 185 AMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDLRHVVAEGVGDFSE 244

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E  M ++P  +  D     A   + + +I+ + +V   ++  G+V   DL
Sbjct: 245 PIERHMTRSPFYLSPDHSAFDAAIAMTERHIAHVCLV-KDRRLCGVVSERDL 295



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P      T L  A++L+ +  +  ++ VD+ +  +GI    DL
Sbjct: 178 NTRLGELAMRHPVTCSSSTPLREAVKLMHEQQVGSIVAVDEHKAPLGIFTLRDL 231


>gi|288932699|ref|YP_003436759.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Ferroglobus placidus DSM 10642]
 gi|288894947|gb|ADC66484.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ferroglobus placidus DSM 10642]
          Length = 584

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 2/110 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +         + +A   + E R G + VV EG+K  GI T+ D+ +    +     V+
Sbjct: 151 RRNPVTCSKDTKIREAAEKMFENRIGSLVVV-EGEKPLGIFTDRDLKKAVSLNKIDGCVD 209

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + M          + +  A   + +  I+ L V+ +  K  G++   D+L
Sbjct: 210 EFMSSPVICDEASSPIFEAYIKMLESGINHL-VITENGKVSGVISIKDVL 258



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 1/61 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V++++ +NP    +DT +  A + + ++ I  L+VV + +K +GI    DL +
Sbjct: 139 EDALLKPVKEIVRRNPVTCSKDTKIREAAEKMFENRIGSLVVV-EGEKPLGIFTDRDLKK 197

Query: 338 F 338
            
Sbjct: 198 A 198


>gi|183220509|ref|YP_001838505.1| hypothetical protein LEPBI_I1110 [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189910618|ref|YP_001962173.1| CBS domain-containing transcriptional regulator [Leptospira biflexa
           serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167775294|gb|ABZ93595.1| Transcriptional regulator containing CBS domains [Leptospira
           biflexa serovar Patoc strain 'Patoc 1 (Ames)']
 gi|167778931|gb|ABZ97229.1| Conserved hypothetical protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 199

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 44/103 (42%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              +   +  L EK    + ++D+  KL G +++ D+            V D+MIK   V
Sbjct: 86  DETIEACLDFLLEKGIRHLPIIDDFGKLVGFVSDRDLLDKTKSYEKENPVSDIMIKRVLV 145

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +    ++L +  I  L +V+D    +GI+   DLLR 
Sbjct: 146 GSPGAEIRQVTKVLLEERIGCLPIVNDDNVPVGIITRSDLLRL 188



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++M         D  +   +  L +  I  L ++DD  K +G V   DLL
Sbjct: 74  EMMTNPVLTKGRDETIEACLDFLLEKGIRHLPIIDDFGKLVGFVSDRDLL 123



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 22/45 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             G  +     +L E+R GC+ +V++     GIIT  D+ R   K
Sbjct: 147 SPGAEIRQVTKVLLEERIGCLPIVNDDNVPVGIITRSDLLRLLLK 191


>gi|294495907|ref|YP_003542400.1| hypothetical protein Mmah_1251 [Methanohalophilus mahii DSM 5219]
 gi|292666906|gb|ADE36755.1| protein of unknown function DUF39 [Methanohalophilus mahii DSM
           5219]
          Length = 500

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 66/171 (38%), Gaps = 10/171 (5%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS------- 229
           T      +   +  IA    +  S  +F+V  P  +L     C      + +        
Sbjct: 326 TPTSSMSSFKKSREIAEELKKWVSAGEFFVNSPSQRLPAKATCKPMRQTTRNPLVQDIMA 385

Query: 230 --IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             + ++       +A  ++ E  F  + VV +  KL GI+T  DI +   +      V+D
Sbjct: 386 RDVVIIDENATFHEAAKMIMENTFSHLPVVSDDGKLAGIVTAWDISKAVAETGCNY-VKD 444

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K          + +A + L    +S + V+D+ +  IGI+   D+ + 
Sbjct: 445 IMTKRVLTSNATDPIDIAARNLDMKEVSAMPVIDNDRYVIGIITSNDISKL 495


>gi|219851836|ref|YP_002466268.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
 gi|219546095|gb|ACL16545.1| homoserine O-acetyltransferase [Methanosphaerula palustris E1-9c]
          Length = 490

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 63/185 (34%), Gaps = 7/185 (3%)

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           S  A     VL +    +         +  I+     +   +   E R+   +D +++  
Sbjct: 298 SGFAPTKATVLIISVTSDWLY--PPYQSQEIVSALSANECDVHYCELRSQFGHDAFLIET 355

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           G    ++       +        V        +  A  ++  +    + V+   Q L GI
Sbjct: 356 GQLNYSISRFLDHTLVRDVMNTQVPVISEQSTIAVAARMMITQGVNHLPVLAPDQSLVGI 415

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T  DI         +L  + +M         D  + VA   + QH IS L V+D  Q  
Sbjct: 416 VTSWDIANAVACGYTSL--DQIMSSQVITTTGDETIEVAASRMEQHRISALPVIDQAQHV 473

Query: 327 IGIVH 331
           IG++ 
Sbjct: 474 IGLIS 478



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 19/73 (26%), Positives = 34/73 (46%)

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +I  G +  +  + L+   V DVM     VI E + + VA +++    ++ L V+   Q 
Sbjct: 352 LIETGQLNYSISRFLDHTLVRDVMNTQVPVISEQSTIAVAARMMITQGVNHLPVLAPDQS 411

Query: 326 AIGIVHFLDLLRF 338
            +GIV   D+   
Sbjct: 412 LVGIVTSWDIANA 424


>gi|170757416|ref|YP_001780998.1| RpiR family transcriptional regulator [Clostridium botulinum B1
           str. Okra]
 gi|169122628|gb|ACA46464.1| transcriptional regulator, RpiR family [Clostridium botulinum B1
           str. Okra]
          Length = 281

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KVIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|171184890|ref|YP_001793809.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934102|gb|ACB39363.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 145

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKDLN-T 282
           +      V     + +A  +++E R G V VVD G   ++ G+++E D+ R     L+ +
Sbjct: 10  ARKPPVTVAQTASIREAAKLMAEARVGLVVVVDPGDPGRILGVVSERDVIRAVASGLDLS 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DVM      +  +  +  A + +R HN+   +VV    +  G++   DL+
Sbjct: 70  RPVRDVMSSPVVAVDAEEPVQNAARAMRNHNVRH-VVVTRGGRLYGVISIRDLI 122



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
           +   D+  K P  + +   +  A +L+ +  + +++VVD  D  + +G+V   D++R 
Sbjct: 4   MKAGDIARKPPVTVAQTASIREAAKLMAEARVGLVVVVDPGDPGRILGVVSERDVIRA 61


>gi|156937441|ref|YP_001435237.1| signal transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566425|gb|ABU81830.1| putative signal transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 275

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 50/126 (39%), Gaps = 4/126 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G       +           +       PL + +  ++E   G V ++D   K+ GI TE
Sbjct: 63  GSYNAKDLLKKEVYNFMSKKVIAAAAEDPLWEVLKAMAEADVGAVPLLDNEGKVIGIFTE 122

Query: 270 GDIFRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QK 325
            D+  N   +L           KNPKV+   T L  A+ ++ +  +  L VV+D      
Sbjct: 123 RDVVLNVAPELEWEGEAMKYATKNPKVVERGTPLADALDIMNELKVRHLPVVEDAKNKGP 182

Query: 326 AIGIVH 331
           A+GI+ 
Sbjct: 183 ALGILT 188



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSV 285
           I +VK   PL +A  ++ E     + VV EG+ L G ++  D+         KDL    V
Sbjct: 17  IKVVKAEEPLRNAAKVMVENGIRHLPVV-EGENLVGFMSIKDVMEVIGSYNAKDLLKKEV 75

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + M K       +  L   ++ + + ++  + ++D+  K IGI    D++
Sbjct: 76  YNFMSKKVIAAAAEDPLWEVLKAMAEADVGAVPLLDNEGKVIGIFTERDVV 126



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 58/128 (45%), Gaps = 11/128 (8%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIIT-----EGDI 272
             + ++  +  +V+ G PL DA+ I++E +   + VV++        GI+T     +  +
Sbjct: 138 EAMKYATKNPKVVERGTPLADALDIMNELKVRHLPVVEDAKNKGPALGILTALNVVDYAL 197

Query: 273 FR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  + L  +S ++VM      ++E+  +  A+Q L       L+++ D +   GI+
Sbjct: 198 RHENKLPEALEEVSADEVMST-LSYVVENAEMREAVQALGMSPTDALLLLGDDKVVKGII 256

Query: 331 HFLDLLRF 338
              D++  
Sbjct: 257 TDRDVMMA 264


>gi|26987096|ref|NP_742521.1| CBS domain-containing protein [Pseudomonas putida KT2440]
 gi|24981723|gb|AAN65985.1|AE016227_6 CBS domain protein [Pseudomonas putida KT2440]
          Length = 645

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +     +     PL +A+ ++ E++ G + VVD  +   GI T  D+ +        L  
Sbjct: 183 AMRHPVVCSAHTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVATVDTDLGA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++  M   P  +        A   + + +I+ + +V +  +  G+V   DL
Sbjct: 243 AIDRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVVSERDL 293



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V    T L  A++L+ +  +  ++VVD  +  IGI    DL
Sbjct: 176 NTPLGELAMRHPVVCSAHTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDL 229



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             H       +       DA   ++E+    V +V E  +L G+++E D+
Sbjct: 245 DRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVVSERDL 293


>gi|84387648|ref|ZP_00990665.1| inositol-5-monophosphate dehydrogenase [Vibrio splendidus 12B01]
 gi|86145603|ref|ZP_01063933.1| inositol-5-monophosphate dehydrogenase [Vibrio sp. MED222]
 gi|218708650|ref|YP_002416271.1| inosine 5'-monophosphate dehydrogenase [Vibrio splendidus LGP32]
 gi|84377493|gb|EAP94359.1| inositol-5-monophosphate dehydrogenase [Vibrio splendidus 12B01]
 gi|85836574|gb|EAQ54700.1| inositol-5-monophosphate dehydrogenase [Vibrio sp. MED222]
 gi|218321669|emb|CAV17623.1| Inosine-5'-monophosphate dehydrogenase [Vibrio splendidus LGP32]
          Length = 487

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEMVRQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVNPDATIADVVALTQKHGFAGFPVVTETNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKARLASVKEGATREEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKA 204


>gi|146276558|ref|YP_001166717.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145554799|gb|ABP69412.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Rhodobacter sphaeroides ATCC
           17025]
          Length = 606

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 52/137 (37%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F      G   +                       +  A   + +     + VV EG   
Sbjct: 125 FTRRRTQGYRASDLTTQKVADLMARKPVTCGPAETIRAAAMKMRDAGVSSLGVV-EGPTF 183

Query: 264 KGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D+  +     L+ +  V +VM ++P  +  + L +  + ++ +  I  L V++
Sbjct: 184 LGIVTTRDMTNKVVAVGLDPSTPVAEVMTRDPIALPPEALGSDILHVMLERRIGHLPVIE 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G++   DL RF
Sbjct: 244 E-GRLVGMITQTDLTRF 259


>gi|327542482|gb|EGF28960.1| inosine-5-monophosphate dehydrogenase [Rhodopirellula baltica WH47]
          Length = 494

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/168 (17%), Positives = 65/168 (38%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL +          ++H    +         V  S + I +
Sbjct: 43  QIPLISSPMDTVTESEMAIALAKEGGLG-----IVHKNLSVRRQTEEVLKVKRSANGIIV 97

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     +  A  ++       + +V++ + L GI+T  D+      D+    +  V
Sbjct: 98  NPVTLNPAQKVSAAAELMDRANVSGIPIVEDDRTLAGILTRRDLRFLEDPDM---PISQV 154

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M + N    + +  L  A ++L +  +  L+++D+ +K  G++   D+
Sbjct: 155 MTRENLVTAVGNVTLAQAEKILTEKRVEKLLLIDEERKLTGLITIRDI 202


>gi|323341979|ref|ZP_08082212.1| transcriptional regulator [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322464404|gb|EFY09597.1| transcriptional regulator [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 280

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 46/197 (23%), Positives = 73/197 (37%), Gaps = 16/197 (8%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEK----------RGLSSLESSLQGELSFQFH 54
           F+H K    + HS  + S  +        E           R   +    L  E+     
Sbjct: 63  FTHLKVELARDHSEEEQSFDKLIKEEDTIETMVRKSHYSNHRTFDNTYKLLNLEV---LD 119

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            ++  I   + R+ + GIG SG +   L            +          L  IT +D+
Sbjct: 120 ASIAAISNAR-RIYLLGIGGSGIVCQDLYHKFVRIDADVVYFDDFHLEMSSLTHITENDV 178

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            I LS+SG + E+      A+      IAIT   ++ +A ++D V+ +PKE      G  
Sbjct: 179 TIALSYSGQTREIIMAQKLAQDKGATTIAITQVGRNELAKNSDFVINIPKEESEVRLGSI 238

Query: 175 PTTSAIMQLAIGDALAI 191
              S    LAI D L +
Sbjct: 239 --ASRFSMLAISDLLYL 253


>gi|238060710|ref|ZP_04605419.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
 gi|237882521|gb|EEP71349.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
          Length = 304

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 6/157 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      L   +  Q    VE I    GR+ + G G SG + S     L   G  +F
Sbjct: 121 ARAVEETAEQLDPAVCEQ---VVEAIVGA-GRIEVYGAGASGFVASDFQQKLHRIGRMAF 176

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +      +     ++ + D+ + +S SG++ ++  +L  AR      +A+T+  +S +  
Sbjct: 177 YFPDVHTALTSAALLGKGDIAVGISHSGTTSDVIEVLEQARSRGAGTVALTNFPRSPITD 236

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
            AD VLT      +   G     S + QL + D L +
Sbjct: 237 VADFVLTTAARETTYRSGA--MASRLAQLTVIDCLFV 271


>gi|89894205|ref|YP_517692.1| hypothetical protein DSY1459 [Desulfitobacterium hafniense Y51]
 gi|89333653|dbj|BAE83248.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 128

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
                  V+   P+ + + I++EK+   + VV+E   L G++ + DIFR   +   + + 
Sbjct: 7   MAKEFVTVRETDPIENVLKIMTEKKVNGLPVVNEQHLLIGMVVKADIFRFMIQPGHIESC 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+ VM K+   +  D  +  A   L  ++I+ + VV +  K +G+V   DLL++
Sbjct: 67  PVDWVMAKDVVSVHPDESVQEAAGKLLSNHIAAMPVV-ENGKVVGVVSVEDLLKY 120



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  VM K    + E   +   ++++ +  ++ L VV++    IG+V   D+ RF
Sbjct: 1   MKIGAVMAKEFVTVRETDPIENVLKIMTEKKVNGLPVVNEQHLLIGMVVKADIFRF 56


>gi|148545635|ref|YP_001265737.1| CBS domain-containing protein [Pseudomonas putida F1]
 gi|148509693|gb|ABQ76553.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Pseudomonas putida F1]
          Length = 645

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +     +     PL +A+ ++ E++ G + VVD  +   GI T  D+ +        L  
Sbjct: 183 AMRHPVVCSAHTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVATVDADLGA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++  M   P  +        A   + + +I+ + +V +  +  G+V   DL
Sbjct: 243 AIDRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVVSERDL 293



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V    T L  A++L+ +  +  ++VVD  +  IGI    DL
Sbjct: 176 NTPLGELAMRHPVVCSAHTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDL 229



 Score = 39.5 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             H       +       DA   ++E+    V +V E  +L G+++E D+
Sbjct: 245 DRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENGRLCGVVSERDL 293


>gi|320353665|ref|YP_004195004.1| CBS domain-containing protein [Desulfobulbus propionicus DSM 2032]
 gi|320122167|gb|ADW17713.1| CBS domain containing protein [Desulfobulbus propionicus DSM 2032]
          Length = 219

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---------KDLNTL 283
           V    P+I+   ++   R   V VVD+  KL GII+  D++R            ++L+  
Sbjct: 14  VSSKQPIIEVEQLMRANRIRRVPVVDD-GKLVGIISREDLYRAMPSIFDPSVSPENLDQA 72

Query: 284 S---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           S      +M ++P  +   T L  A  L+R H    L+V+ D    +GI+   ++   
Sbjct: 73  SRIEAGSIMTRSPVTVDPSTPLEEAALLMRTHKFGSLLVMQDD-HLVGIITETNIFDA 129



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+  M  N   +     +    QL+R + I  + VVDD  K +GI+   DL R 
Sbjct: 3   VKLWMTSNLLTVSSKQPIIEVEQLMRANRIRRVPVVDD-GKLVGIISREDLYRA 55



 Score = 39.1 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                     S   V    PL +A  ++   +FG + V+ +   L GIITE +IF  F
Sbjct: 74  RIEAGSIMTRSPVTVDPSTPLEEAALLMRTHKFGSLLVMQDD-HLVGIITETNIFDAF 130


>gi|312137438|ref|YP_004004775.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311225157|gb|ADP78013.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 266

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 53/113 (46%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V    P  + + ++ + +     V D+  KL G++T  D+      + +   
Sbjct: 10  YMTRKVICVTPETPTSELVELMKKTQHDGFPVTDD-GKLVGMVTSFDLI----TNPSAKK 64

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+++M  +  V  E+  +  A +++ +  +S L VV+   K +GI+   D++R
Sbjct: 65  VKEIMSTDVVVTRENMTIHDAARVMFREGVSRLPVVNGEGKVVGIITNTDIIR 117



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M +    +  +T  +  ++L+++       V DD  K +G+V   DL+
Sbjct: 7   VKDYMTRKVICVTPETPTSELVELMKKTQHDGFPVTDD-GKLVGMVTSFDLI 57


>gi|310644607|ref|YP_003949366.1| 6-phospho 3-hexuloisomerase domain protein [Paenibacillus polymyxa
           SC2]
 gi|309249558|gb|ADO59125.1| 6-phospho 3-hexuloisomerase domain protein [Paenibacillus polymyxa
           SC2]
          Length = 185

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 38/153 (24%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           A   +V + G G+SG +   LA  L   G  ++ V            ++  DL+I+ S S
Sbjct: 34  AAANKVFVAGAGRSGFMIRSLAMRLMHMGVQAYVVGETVTP-----GLSEGDLLIIGSGS 88

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP----HGLAPTT 177
           G +  L ++   A++    L  +T+  +S +   ADI++ LP  P+         + P  
Sbjct: 89  GETKSLVSMADKAKKLGASLAVLTTSPESTIGKLADIIVKLPGAPKDPSSKDYQTIQPMG 148

Query: 178 SAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           S   Q     GDAL +  ++ R  +    Y  H
Sbjct: 149 SLFEQTLLLYGDALVLRTMQLRKLTSESMYGQH 181


>gi|24380042|ref|NP_721997.1| putative acetoin utilization protein, acetoin dehydrogenase
           [Streptococcus mutans UA159]
 gi|24378033|gb|AAN59303.1|AE014996_6 putative acetoin utilization protein, acetoin dehydrogenase
           [Streptococcus mutans UA159]
          Length = 219

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ EK    + V+ E   L G++TEG I                +  L
Sbjct: 14  ISPDTTVAKATDIMREKNLRRLPVI-ENDVLVGLLTEGTIADANPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N     DVMIK+   + +D  L  A+ ++ +H I VL VVD   +  GI+   D+ R 
Sbjct: 73  NKTKARDVMIKDVITVSKDDRLEDAIYIMMKHKIGVLPVVD-GNQMSGIITDKDVFRA 129



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M +    I  DT +  A  ++R+ N+  L V+++    +G++ 
Sbjct: 1   MPVKDFMTRRVVYISPDTTVAKATDIMREKNLRRLPVIEND-VLVGLLT 48



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI I+ + + G + VVD G ++ GIIT+ D+FR F
Sbjct: 81  MIKDVITVSKDDRLEDAIYIMMKHKIGVLPVVD-GNQMSGIITDKDVFRAF 130


>gi|238924894|ref|YP_002938410.1| inosine-5-monophosphate dehydrogenase [Eubacterium rectale ATCC
           33656]
 gi|238876569|gb|ACR76276.1| inosine-5-monophosphate dehydrogenase [Eubacterium rectale ATCC
           33656]
 gi|291525981|emb|CBK91568.1| inosine-5'-monophosphate dehydrogenase [Eubacterium rectale DSM
           17629]
 gi|291527284|emb|CBK92870.1| inosine-5'-monophosphate dehydrogenase [Eubacterium rectale M104/1]
          Length = 485

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 58/167 (34%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAAMDTVTESKMAIAMARQGGIG-----IIHKNMSIEAQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ +   V +  +  KL GIIT  D+   F  D      E +
Sbjct: 96  DPFYLSPDHTLQDADNLMAKFKISGVPIT-KDGKLVGIITNRDLK--FETDFTKKISESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +N     E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSENLITAPEGITLDEAKKILAKARKEKLPIVDKDYNLKGLITIKDI 199


>gi|289581801|ref|YP_003480267.1| peptidase M50 [Natrialba magadii ATCC 43099]
 gi|289531354|gb|ADD05705.1| peptidase M50 [Natrialba magadii ATCC 43099]
          Length = 415

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 26/153 (16%), Positives = 56/153 (36%), Gaps = 25/153 (16%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGI 266
            K     V  SD+M   + +  V     +   I  +  +R     VV+       +L G+
Sbjct: 243 MKAAFQDVTVSDIMTPANDLHTVTPDASVAQLIQRMFSERHTGYPVVESNGSGGGQLVGL 302

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK- 325
           +T  D       + +  +VE++M  + K I  ++    A++ + ++ I  L+VV+     
Sbjct: 303 VTLEDAREIQPVERDAHTVEEIMTTDLKTISAESDAMTAIEQMHENGIGRLLVVERNGHG 362

Query: 326 --------------------AIGIVHFLDLLRF 338
                                +G++   D++  
Sbjct: 363 TVPGQDTDVPPGSEPRAGDDLVGLISRSDIMTA 395


>gi|148978546|ref|ZP_01814998.1| transcriptional regulator, RpiR family protein [Vibrionales
           bacterium SWAT-3]
 gi|145962335|gb|EDK27616.1| transcriptional regulator, RpiR family protein [Vibrionales
           bacterium SWAT-3]
          Length = 282

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 65/158 (41%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            SLE ++      Q   A + +     ++ I+G+G S  +    A  L   G        
Sbjct: 108 QSLERTVLLNEGEQLSNAADLLHLA-NKIQISGVGASSLVAKDFAYKLMKIGHAVHAEPD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A     +   +T +D+++ +S+SG + E+  +   AR     +I I+  + S +  +ADI
Sbjct: 167 AHIQIANAASLTENDVLVAISYSGKTREVVKVAQLARSKKAKVIVISQLSPSALDKYADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            L      +      +  T+   Q  I D L IAL + 
Sbjct: 227 KLI--SAADENHIRSSSITARDSQFYITDLLFIALTQQ 262


>gi|116249487|ref|YP_765325.1| hypothetical protein pRL90028 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254135|emb|CAK03738.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 214

 Score = 81.1 bits (199), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 47/117 (40%), Gaps = 25/117 (21%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------------------LN 281
           + + +   + VVD    L GI+++GD  R    +                         +
Sbjct: 1   MLDNKISGLPVVDANGALVGIVSDGDFLRRSELNTERKRSWLLEWLTSPGKIADEYVRAH 60

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              VE+VM      I     ++ A++L+ + +I  L VV D  + +GIV   DLLR 
Sbjct: 61  GRRVEEVMTAPVSAIAPTASISDAVRLMERRDIKRLPVVTD-GRLVGIVARSDLLRA 116



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           +     + DA+ ++  +    + VV    +L GI+   D+ R   + L   +V 
Sbjct: 75  IAPTASISDAVRLMERRDIKRLPVV-TDGRLVGIVARSDLLRALSQALPAAAVS 127


>gi|288560461|ref|YP_003423947.1| homoserine O-acetyltransferase MetX2 [Methanobrevibacter
           ruminantium M1]
 gi|288543171|gb|ADC47055.1| homoserine O-acetyltransferase MetX2 [Methanobrevibacter
           ruminantium M1]
          Length = 490

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +P + I   + DA  I+ + +   + VVDE  KL GI+T  D+ ++  KD   L  
Sbjct: 376 MKTDVPTIDINSTIKDAANIMFDNQVTHLPVVDENDKLLGIVTAWDLSKSIAKDCKLL-- 433

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           EDVM K+ +       +    + +++ +IS L VV+D     GI+ 
Sbjct: 434 EDVMTKDVRYCKSTDSIEYISRQMKKFDISCLPVVNDDLCLEGIIT 479



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 34/69 (49%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            G +    +  L+   V+D+M  +   I  ++ +  A  ++  + ++ L VVD+  K +G
Sbjct: 356 NGQMNFLLNNFLSENVVDDLMKTDVPTIDINSTIKDAANIMFDNQVTHLPVVDENDKLLG 415

Query: 329 IVHFLDLLR 337
           IV   DL +
Sbjct: 416 IVTAWDLSK 424


>gi|238020162|ref|ZP_04600588.1| hypothetical protein GCWU000324_00033 [Kingella oralis ATCC 51147]
 gi|237868556|gb|EEP69560.1| hypothetical protein GCWU000324_00033 [Kingella oralis ATCC 51147]
          Length = 487

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H    +    +    V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTVEQQALAVRKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + D +    E++     + V E  K+ GI+T  D+   F   L  L V  
Sbjct: 95  DPVTVSPDKLIGDLLAERQERKRKMSGLPVVENGKVIGIVTNRDLR--FETRL-DLPVRA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        +   T +  A +L+ +H I  ++V+++  +  G++   D+++
Sbjct: 152 IMTPREKLVTVSVGTSIEEARELMHRHKIERVLVLNEQDELKGLITVKDIVK 203



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 29/56 (51%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +M   + +  V +G  + +A  ++   +   V V++E  +LKG+IT  DI +N
Sbjct: 149 VRAIMTPREKLVTVSVGTSIEEARELMHRHKIERVLVLNEQDELKGLITVKDIVKN 204


>gi|171911344|ref|ZP_02926814.1| inosine-5'-monophosphate dehydrogenase [Verrucomicrobium spinosum
           DSM 4136]
          Length = 485

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/169 (22%), Positives = 64/169 (37%), Gaps = 14/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIAL            V+H    +       + V  S +++  
Sbjct: 40  NIPVLSSAMDTVTESELAIALAREGG-----MGVIHRACTIDFQAEQVARVKRSENTVIQ 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    L +   ++ EK      VVDE   L G++T  D+   + +D  +     +
Sbjct: 95  KPLTVRPDTTLAELARLMREKGVSGFPVVDEKNVLVGMVTSRDM--WYLED-ESTPAHKM 151

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M    K  V   DT    A+++L  + I  L +VD      G++   D+
Sbjct: 152 MTPREKLAVGEPDTNWEEALKILYINRIEKLPLVDAAGHLAGLITKQDI 200


>gi|84386885|ref|ZP_00989909.1| mannose-1-phosphate guanyltransferase [Vibrio splendidus 12B01]
 gi|84378175|gb|EAP95034.1| mannose-1-phosphate guanyltransferase [Vibrio splendidus 12B01]
          Length = 352

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 2/115 (1%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           + H   ++ LV     ++DA+ IL ++    V V+++   L G++T+GDI R     L+ 
Sbjct: 1   MSHEWKNVQLV-PSSTILDALDILDKEALRVVLVINDKGCLIGVVTDGDIRRGLLNKLSL 59

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  VM  +P      T     ++L+    I  + +V +    +G+    D+L
Sbjct: 60  NDEISTVMNTSPITATLGTSREQLIELMELKGILSIPLVSESGVVVGLETLQDIL 114


>gi|325969076|ref|YP_004245268.1| signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323708279|gb|ADY01766.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 146

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           ++     + DA+ I+S +  G + +V+   K  G+I+E D+ +   +  +    V +V  
Sbjct: 15  VISENARVKDAVNIMSRENVGILVIVNNAGKPIGVISERDVIKALARGKDLNAKVTEVGT 74

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             N   +     +  A  L+  H I  L+V+D   K  G++   D++
Sbjct: 75  VGNLITVGPKDSIYRAALLMNDHKIRHLVVMDGD-KLRGVISIRDII 120



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 36/57 (63%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +V+ V+ + P VI E+  +  A+ ++ + N+ +L++V++  K IG++   D+++ 
Sbjct: 2   SFTVDKVIKREPLVISENARVKDAVNIMSRENVGILVIVNNAGKPIGVISERDVIKA 58


>gi|237808720|ref|YP_002893160.1| transcriptional regulator, RpiR family [Tolumonas auensis DSM 9187]
 gi|237500981|gb|ACQ93574.1| transcriptional regulator, RpiR family [Tolumonas auensis DSM 9187]
          Length = 292

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              + +++ +           A + I   K  VVI G+G S  +       L   G  S 
Sbjct: 108 ANSIQAMKEARSVADPILIANAAQLIFNAKN-VVIFGVGGSAAVCQDFEHKLLRIGILSR 166

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                         +  +D+I+V+S SG + EL   +  A++    +I IT+ + S +A 
Sbjct: 167 AYSDFHMMLMVSSQLDENDVIVVISQSGDTRELLKAVENAKQRHSRVICITNNDTSALAQ 226

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            AD  +  P +        A   + I+QL + D L IA+
Sbjct: 227 LADYAIFSPAKGGILLGQNA--VARIVQLNLLDVLFIAI 263


>gi|163749539|ref|ZP_02156786.1| inositol-5-monophosphate dehydrogenase [Shewanella benthica KT99]
 gi|161330649|gb|EDQ01586.1| inositol-5-monophosphate dehydrogenase [Shewanella benthica KT99]
          Length = 490

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    ++
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRRVKIYEAGIVQQPVTV 100

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L D   +  +  F    VV++  +L GIIT  D+   F  D +  +V  VM 
Sbjct: 101 T---PTTTLADLKVLTLKNGFAGYPVVNDANELVGIITGRDVR--FITDWSR-TVAQVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  ++E T L    +L+  H I  ++VVD   K  G++   D  + 
Sbjct: 155 PKDRLVTVVEGTQLDEVQKLMHSHRIEKVLVVDGNFKLKGLITVKDFQKA 204



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 26/62 (41%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + VM   D +  V  G  L +   ++   R   V VVD   KLKG+IT  D  +  
Sbjct: 146 SRTVAQVMTPKDRLVTVVEGTQLDEVQKLMHSHRIEKVLVVDGNFKLKGLITVKDFQKAE 205

Query: 277 HK 278
            K
Sbjct: 206 QK 207


>gi|150021303|ref|YP_001306657.1| CBS domain-containing protein [Thermosipho melanesiensis BI429]
 gi|149793824|gb|ABR31272.1| CBS domain containing protein [Thermosipho melanesiensis BI429]
          Length = 859

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 46/113 (40%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     +     ++     G   V+D G KL GI+T   + +          +
Sbjct: 311 MTSPVRTVLAYETIAKVYELMKLTGHGGFPVID-GNKLVGIVTRKAVDKAMRHGFEERPI 369

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +M      + E+  ++   +++ +++I  + V+++    +GI+   DLL  
Sbjct: 370 KSIMNTKLITVHENDSISKVKKIMLENDIGRIPVLNENNLLVGIITRTDLLNA 422



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 24/70 (34%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +   F            +  V     +     I+ E   G + V++E   L GIIT  
Sbjct: 358 KAMRHGFEERPIKSIMNTKLITVHENDSISKVKKIMLENDIGRIPVLNENNLLVGIITRT 417

Query: 271 DIFRNFHKDL 280
           D+     K++
Sbjct: 418 DLLNADFKNV 427


>gi|256017423|ref|ZP_05431288.1| putative DNA-binding transcriptional regulator [Shigella sp. D9]
 gi|260856528|ref|YP_003230419.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|260869123|ref|YP_003235525.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|300922136|ref|ZP_07138273.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|301328930|ref|ZP_07221961.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|332278422|ref|ZP_08390835.1| DNA-binding transcriptional regulator [Shigella sp. D9]
 gi|257755177|dbj|BAI26679.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|257765479|dbj|BAI36974.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|300421451|gb|EFK04762.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300844672|gb|EFK72432.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|323156333|gb|EFZ42491.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           EPECa14]
 gi|323177447|gb|EFZ63035.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1180]
 gi|332100774|gb|EGJ04120.1| DNA-binding transcriptional regulator [Shigella sp. D9]
          Length = 285

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    ++ I   +  + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIDVISKAQ-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|239637976|ref|ZP_04678937.1| CBS domain protein [Staphylococcus warneri L37603]
 gi|239596539|gb|EEQ79075.1| CBS domain protein [Staphylococcus warneri L37603]
          Length = 432

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/212 (21%), Positives = 80/212 (37%), Gaps = 12/212 (5%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL  IL Y    ++ +I      +  V      +L           G  PT   I     
Sbjct: 104 ELSDILRYIGPQTLLIIGNRRNVQLEVLKRGTAILITG--------GFQPTKEVIQYADD 155

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
            D   ++         N         K+    +   D++   + + ++     L D   I
Sbjct: 156 HDLPVLSSSYDTFLVANIINRAMFNQKIRKEILVVEDIVKPINELSVLLNTMTLEDYKQI 215

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
            +E       VV++  KL GI+T  +I      D+    +EDVM K+P  +     +   
Sbjct: 216 ANETGHTRFPVVNKDYKLVGIVTSREIINMNDNDM----IEDVMTKHPISVKLSNTVASC 271

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             LL    I +L V D+ +KA+G+++  D+L+
Sbjct: 272 AHLLIWEGIELLPVTDNNKKAVGVINRQDVLK 303


>gi|56750054|ref|YP_170755.1| chloride channel protein [Synechococcus elongatus PCC 6301]
 gi|56685013|dbj|BAD78235.1| probable chloride channel protein [Synechococcus elongatus PCC
           6301]
          Length = 859

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVI 296
           PL + I   +        V  +   L GI+T  D+  +       ++ + ++M  +P  +
Sbjct: 454 PLTEVIQQFNRTHHRGFPVT-QKGALVGIVTSSDLDEQTLKGKGESVRLSEIMTPHPLTV 512

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                L   + +L +  IS L VVD  +K +GI+   D++R 
Sbjct: 513 APQDTLAHVLYVLNRFQISRLPVVD-GRKLVGIITRADIIRA 553



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                        V     L   + +L+  +   + VVD G+KL GIIT  DI R   + 
Sbjct: 499 VRLSEIMTPHPLTVAPQDTLAHVLYVLNRFQISRLPVVD-GRKLVGIITRADIIRAESEL 557

Query: 280 LNTLSVE 286
           L+   + 
Sbjct: 558 LSGQDIA 564


>gi|303229463|ref|ZP_07316253.1| CBS domain protein [Veillonella atypica ACS-134-V-Col7a]
 gi|303231393|ref|ZP_07318127.1| CBS domain protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302513989|gb|EFL55997.1| CBS domain protein [Veillonella atypica ACS-049-V-Sch6]
 gi|302515999|gb|EFL57951.1| CBS domain protein [Veillonella atypica ACS-134-V-Col7a]
          Length = 151

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 51/136 (37%), Gaps = 27/136 (19%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDLNTLS 284
              V    P+ D   +L +     V+VVDE  KL GII+EGD+       +    +N L 
Sbjct: 11  PVTVGKDAPISDVADLLVKYNLTAVSVVDEENKLLGIISEGDLLYKKVRPHVPHYVNVLG 70

Query: 285 VE----------------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                                   ++M  +      D  +   + ++   ++  + VVD 
Sbjct: 71  ASIYYNGIGEYNAQFKKLLASHVYELMTSDVITTTPDKDVEEIVSVMLDQHLKNVPVVDK 130

Query: 323 CQKAIGIVHFLDLLRF 338
             + IGI+   D+++ 
Sbjct: 131 EYRLIGILSRRDIIKL 146



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 34/58 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++DVM K P  + +D  ++    LL ++N++ + VVD+  K +GI+   DLL   +
Sbjct: 1   MKIQDVMNKYPVTVGKDAPISDVADLLVKYNLTAVSVVDEENKLLGIISEGDLLYKKV 58



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + + ++++ ++    V VVD+  +L GI++  DI +   KD
Sbjct: 106 PDKDVEEIVSVMLDQHLKNVPVVDKEYRLIGILSRRDIIKLIAKD 150


>gi|288556583|ref|YP_003428518.1| cell wall regulatory transcriptional regulator [Bacillus
           pseudofirmus OF4]
 gi|288547743|gb|ADC51626.1| cell wall regulatory transcriptional regulator [Bacillus
           pseudofirmus OF4]
          Length = 284

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 64/160 (40%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L+ +L+     +F  AV      K +V + G+G S          L   G  +     
Sbjct: 109 MALDLTLKTLSHSEFEKAVNAFVQAK-KVALFGVGGSYPPAVDGQYKLMRIGYHAAASSD 167

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                  +  + + D+I+  S SG + E+  I  YA+   I +I+IT+ N+S +   +DI
Sbjct: 168 YHYMVPFITYMKKGDVILCFSSSGKTKEVIDIAQYAKERGITVISITTLNQSPLYKMSDI 227

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            L +P        G     S      + DAL +++     
Sbjct: 228 TLCIPDLEAEERIGSI--ASRTAHQNVVDALYVSIFHEIG 265


>gi|191637238|ref|YP_001986404.1| 6-phospho-3-hexuloisomerase [Lactobacillus casei BL23]
 gi|190711540|emb|CAQ65546.1| 6-phospho-3-hexuloisomerase [Lactobacillus casei BL23]
 gi|327381277|gb|AEA52753.1| Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Lactobacillus casei LC2W]
 gi|327384448|gb|AEA55922.1| Hexulose-6-phosphate synthase (D-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Lactobacillus casei BD-II]
          Length = 187

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 15/180 (8%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L  + +   + Q   A+  I   K R+ + G G+SG      A+ L   G  S FV 
Sbjct: 10  LEELTQNAKFVKADQLQSAINSIMNAK-RIFLAGAGRSGFAARGFANRLMHLGFHSNFVG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I + DL+I+ S SG +  L +    A++    +  +T   ++ +   +D
Sbjct: 69  DTVTP-----SIQKGDLLIIGSGSGETASLVSDAKKAKQVGAHIGTLTIFPENTIGSLSD 123

Query: 158 IVLTLP-------KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
             + +P        E       + P  S+  QL+    DAL + L++     +N+ +  H
Sbjct: 124 WHIVIPGVTSKVDGENTEHGQSIQPHGSSFEQLSWLVYDALVVYLMQETKQGDNEMFARH 183


>gi|81300397|ref|YP_400605.1| CBS [Synechococcus elongatus PCC 7942]
 gi|81169278|gb|ABB57618.1| CBS [Synechococcus elongatus PCC 7942]
          Length = 859

 Score = 81.1 bits (199), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDVMIKNPKVI 296
           PL + I   +        V  +   L GI+T  D+  +       ++ + ++M  +P  +
Sbjct: 454 PLTEVIQQFNRTHHRGFPVT-QKGALVGIVTSSDLDEQTLKGKGESVRLSEIMTPHPLTV 512

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                L   + +L +  IS L VVD  +K +GI+   D++R 
Sbjct: 513 APQDTLAHVLYVLNRFQISRLPVVD-GRKLVGIITRADIIRA 553



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                        V     L   + +L+  +   + VVD G+KL GIIT  DI R   + 
Sbjct: 499 VRLSEIMTPHPLTVAPQDTLAHVLYVLNRFQISRLPVVD-GRKLVGIITRADIIRAESEL 557

Query: 280 LNTLSVE 286
           L+   + 
Sbjct: 558 LSGQDIA 564


>gi|312144269|ref|YP_003995715.1| signal transduction protein with CBS domains [Halanaerobium sp.
           'sapolanicus']
 gi|311904920|gb|ADQ15361.1| putative signal transduction protein with CBS domains
           [Halanaerobium sp. 'sapolanicus']
          Length = 263

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     +++A  ILS  + G + VV E  +L G++T+GDI     KDL    V
Sbjct: 8   MTANPITINPDATIMEAEKILSINKIGRLLVV-ENGELIGMLTDGDIIS--EKDL-QAPV 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ED M ++   I E   +  A + +  ++I  L V +D Q+ +GIV   D++
Sbjct: 64  EDFMSEDLIKINEKKTVQDAAKKISDNHIGGLPVFNDKQELVGIVTSEDIV 114



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           V+DVM  NP  I  D  +  A ++L  + I  L+VV +  + IG++   D++   
Sbjct: 4   VKDVMTANPITINPDATIMEAEKILSINKIGRLLVV-ENGELIGMLTDGDIISEK 57



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 5/77 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +  +     + DA   +S+   G + V ++ Q+L GI+T  DI   + KD      
Sbjct: 67  MSEDLIKINEKKTVQDAAKKISDNHIGGLPVFNDKQELVGIVTSEDIVYGYLKDEEAEME 126

Query: 286 EDVMIKNPKVILEDTLL 302
            +      K I  ++  
Sbjct: 127 MEK-----KTITPESSA 138


>gi|218778139|ref|YP_002429457.1| hypothetical protein Dalk_0280 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218759523|gb|ACL01989.1| CBS domain containing membrane protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 237

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 13/111 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           V     + +A  ++ E        V +  KL G++T+ D+ R    D  +LS        
Sbjct: 14  VNTDSTVKEARRLM-EVCHTRTLPVLKKGKLVGVVTDRDLKRAAPSDATSLSRHEIAYLQ 72

Query: 285 ----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               V+DVM K+P  +     +  A  L  +  IS   V+DD  + +G + 
Sbjct: 73  EKIAVKDVMTKDPITLSPTDTVEQAAMLFLEKKISGAPVMDDKGRLMGTIT 123



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M ++   +  D+ +  A +L+   +   L V+    K +G+V   DL R 
Sbjct: 3   IKDWMKQDGVSVNTDSTVKEARRLMEVCHTRTLPVL-KKGKLVGVVTDRDLKRA 55


>gi|209518732|ref|ZP_03267548.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. H160]
 gi|209500846|gb|EEA00886.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. H160]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F + L+   V  +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FEERLDE-PVRHIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|187780015|ref|ZP_02996488.1| hypothetical protein CLOSPO_03611 [Clostridium sporogenes ATCC
           15579]
 gi|187773640|gb|EDU37442.1| hypothetical protein CLOSPO_03611 [Clostridium sporogenes ATCC
           15579]
          Length = 281

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 3/147 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +   AVE IK  +  + + G+G S  +       L        F   +         I
Sbjct: 116 DEKLLEAVEAIKNAET-IYLYGVGASAMVAMDFQYKLLRINKKVMFQLDSHLQLAVAVHI 174

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T  D+ + +S+SG++ E+   +  A++     IAIT   KS ++  ADI L +P   +  
Sbjct: 175 TNRDVAVAISYSGNTKEVNLAIEEAKKNGATTIAITKCGKSNLSNIADINLNIPSIEKDL 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLES 196
             G    +S   QL + D+L + + + 
Sbjct: 235 RIGAI--SSRTSQLFVTDSLFLGIAKE 259


>gi|320449818|ref|YP_004201914.1| CBS domain-containing protein [Thermus scotoductus SA-01]
 gi|320149987|gb|ADW21365.1| CBS domain containing protein [Thermus scotoductus SA-01]
          Length = 582

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/197 (19%), Positives = 70/197 (35%), Gaps = 28/197 (14%)

Query: 144 ITSENK--SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           ++ E    SVVA     VL+ P+E       + P  +       G  L   +   R    
Sbjct: 78  LSGEPPALSVVAKTPVKVLSFPQEAF-QRLLMYPEVARF----FGQGLVQRVQLRRVPEP 132

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
           + F    P G L                  L+     + +A   + E+    + V     
Sbjct: 133 SLFA---PVGSLVRR------------PPALIPASATVEEAARRMREEGISSLLV---EA 174

Query: 262 KLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              GI+T+ D+  R   +    T  V +VM      +  +T +  A+  + +  I  L +
Sbjct: 175 SPLGILTDRDLRNRVLAEGRPPTTPVAEVMTAPLFTLPVETPIYEALAAMVERGIHHLPL 234

Query: 320 VDDCQKAIGIVHFLDLL 336
             + +K +G+V   D+L
Sbjct: 235 T-EGEKVVGVVTHTDIL 250


>gi|313906121|ref|ZP_07839471.1| inosine-5'-monophosphate dehydrogenase [Eubacterium cellulosolvens
           6]
 gi|313469061|gb|EFR64413.1| inosine-5'-monophosphate dehydrogenase [Eubacterium cellulosolvens
           6]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMTIEQQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D  T  +++ 
Sbjct: 96  DPFYLSAEHTLADANALMAKYRISGVPIT-EGKKLVGIITNRDLL--FERDF-TKKIKES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +     LE   +  A  +L +     L +VD      G++   D+
Sbjct: 152 MTSEGLITALEGVTIEEAKTILAKARKEKLPIVDKDGNLKGLITIKDI 199



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I +P  +  +  L  A  L+ ++ IS + +  + +K +GI+   DLL
Sbjct: 94  ITDPFYLSAEHTLADANALMAKYRISGVPIT-EGKKLVGIITNRDLL 139


>gi|219121815|ref|XP_002181254.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217407240|gb|EEC47177.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 182

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           +    P+ DA+   +    GC+   D+   + G+++E D         +      V+++ 
Sbjct: 46  IPEDTPVYDAVQKFAAFNIGCLVTTDKAGNMTGVVSERDYICKIALLGRTSKETPVKEIA 105

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  N         +   M+ +    I  L +VDD +K IG+V   DL++
Sbjct: 106 TRGANIITAKAGESVESCMEKMMSKGIRHLPIVDDAEKVIGMVSIKDLVK 155


>gi|168185826|ref|ZP_02620461.1| glycine betaine transport ATP-binding protein opuAA [Clostridium
           botulinum C str. Eklund]
 gi|169295991|gb|EDS78124.1| glycine betaine transport ATP-binding protein opuAA [Clostridium
           botulinum C str. Eklund]
          Length = 378

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 51/94 (54%), Gaps = 1/94 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ A  I++E+    + VVD+   LKGI T  DI ++   D   L ++DVM  +   + 
Sbjct: 266 TILQASEIMAERHVDSILVVDKDNILKGIATLKDIRKSREND-KKLMLKDVMNSDVVCVN 324

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +D  +   ++++   N+  + VVD+ +K +G++ 
Sbjct: 325 KDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLIT 358



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 28/54 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ED++I+NP   + +  +  A +++ + ++  ++VVD      GI    D+ +
Sbjct: 249 KAEDIIIENPVKAVGNRTILQASEIMAERHVDSILVVDKDNILKGIATLKDIRK 302



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               +  V     ++D + +++ K  G + VVDE +KL G+IT
Sbjct: 316 MNSDVVCVNKDKSIVDVLEVMNIKNVGYIPVVDENKKLLGLIT 358


>gi|320180416|gb|EFW55347.1| Sialic acid utilization regulator, RpiR family [Shigella boydii
           ATCC 9905]
          Length = 285

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDFARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|284032848|ref|YP_003382779.1| RpiR family transcriptional regulator [Kribbella flavida DSM 17836]
 gi|283812141|gb|ADB33980.1| transcriptional regulator, RpiR family [Kribbella flavida DSM
           17836]
          Length = 294

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 74/182 (40%), Gaps = 5/182 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G  +  + ++   LR+++  +    +LE ++           V ++   + R+ +  +G 
Sbjct: 94  GAEVSPDDSLDEVLRTLL--RADTRALEDTVAELDVQALGQTVHEVAQAR-RIDLYAVGG 150

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  +   L   L   G  +        +     ++   D+ + +S SG ++E+   L  A
Sbjct: 151 SASVAEDLRLRLHRIGRGANSWSDVHTALTSAALLGPGDVALGISHSGETNEVLEPLRRA 210

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           R+     +A+T+  +S +A  AD+VL       +   G         Q+ + DAL + + 
Sbjct: 211 RQQGATAVAVTNYPRSPLAQAADLVLVTAARDITFRTGGLAGRH--AQMIVLDALYLGVA 268

Query: 195 ES 196
           + 
Sbjct: 269 QR 270


>gi|167564094|ref|ZP_02357010.1| transcriptional regulator, RpiR family protein [Burkholderia
           oklahomensis EO147]
          Length = 302

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+E +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNNLSATSVADAIELLSRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +++IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVVSIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|58617508|ref|YP_196707.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Gardel]
 gi|58417120|emb|CAI28233.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Gardel]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +F       ++  +    S ++++  + 
Sbjct: 37  KIPIISAAMDTVTEANLAIALAQHGGIGCIHKNFSTDQQLLEVRKVKKHESWIVYNPIA- 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             V     L  A++I+ +  +  + VV   + G++L GI+T  D+    +KD     V D
Sbjct: 96  --VSPEDSLAVALSIMKKYSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVAD 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K +   + E      A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 151 IMTKDHLITVPEGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|325181316|emb|CCA15731.1| myosinlike protein putative [Albugo laibachii Nc14]
          Length = 616

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 40/100 (40%), Gaps = 4/100 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKN 292
              + D + ++  ++     +VD    L GI+T+ DI        +D     V +VM  N
Sbjct: 114 QSSVFDCVKMMVRQKTDAALLVDAKGSLTGILTDSDIAYKVVAMGRDPKMFRVCEVMTPN 173

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           P  +  +     A+  +       L V D+  K +GI+  
Sbjct: 174 PSCVAPNANPIDALNKMISGKFRHLPVADNE-KIVGILDI 212



 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 5/127 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---N 275
             S +++    +P+V+       A  ++  +R   V V +E  ++ GI+T  D+ R    
Sbjct: 265 TLSVIVNEDTVVPIVRPNDTAFQAAKLMLRERMSAVMVCNEADEMIGIMTSKDLMRRVVA 324

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLD 334
              D +   V  VM  NP    +DT +   +  +       + V+D   +K +G++  L 
Sbjct: 325 LDVDSSKCHVSSVMTTNPYTATKDTTILETLHSMHNGQFLHVPVLDSSKKKLVGLLDVLQ 384

Query: 335 LLRFGII 341
           + R G++
Sbjct: 385 VTR-GVV 390


>gi|153938806|ref|YP_001390707.1| RpiR family transcriptional regulator [Clostridium botulinum F str.
           Langeland]
 gi|152934702|gb|ABS40200.1| transcriptional regulator, RpiR family [Clostridium botulinum F
           str. Langeland]
 gi|295318781|gb|ADF99158.1| transcriptional regulator, RpiR family [Clostridium botulinum F
           str. 230613]
          Length = 281

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KVIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|17229871|ref|NP_486419.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
 gi|17131471|dbj|BAB74078.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
          Length = 1344

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 13/112 (11%)

Query: 233 VKIGCPLIDAITIL---------SEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLN 281
           V     L+D I ++         S   F    +V E + L GI T  DI R      +++
Sbjct: 23  VLPDTLLVDVIALMNPVSRCTIDSASDFSSCVLVVEEKNLVGIFTLRDIVRLTGVGVNIS 82

Query: 282 TLSVEDVMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +VM +    + +        A+  +RQH+I  L VVD+  + +G++ 
Sbjct: 83  RKKISEVMTQPVISLTQAAAQNALTALAFMRQHHIRHLPVVDEQGQLLGLIT 134



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 67/172 (38%), Gaps = 10/172 (5%)

Query: 175 PTTSAIMQLAIGDALAIALLESRN----FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           P +   +  A   +  + ++E +N    F+  D   L   G   +    +  +     S+
Sbjct: 38  PVSRCTIDSASDFSSCVLVVEEKNLVGIFTLRDIVRLTGVGVNISRKKISEVMTQPVISL 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDV 288
                   L  A+  + +     + VVDE  +L G+IT+  I +       L    V +V
Sbjct: 98  TQAAAQNALT-ALAFMRQHHIRHLPVVDEQGQLLGLITQDRIRQVVQPAHLLKLRCVTEV 156

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLR 337
           M+      L  T +    Q++    IS +++V   +     +G++   D+L+
Sbjct: 157 MVTQIIHALPTTSVLELSQMMSDRRISCVVIVAPQETKLIPVGMITEKDILK 208



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDI 272
              C ++VM +     L      +++   ++S++R  CV +V   +      G+ITE DI
Sbjct: 149 KLRCVTEVMVTQIIHAL--PTTSVLELSQMMSDRRISCVVIVAPQETKLIPVGMITEKDI 206

Query: 273 FRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   +  D+     + VM      I     L     L++   +  L+VV +  +  G+V
Sbjct: 207 LKVHLQGLDIAQTPAQTVMSSPVFSISPSESLWTVNLLMQARGVRRLVVVGEQGQLQGLV 266

Query: 331 HFLDLLR 337
              +LL+
Sbjct: 267 TQTNLLQ 273



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 12/72 (16%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR---QHNI-------SVLMVVDDCQKAIGI 329
           ++  ++E VM   P  +L DTLL   + L+    +  I       S ++VV++    +GI
Sbjct: 7   VDLPTIEQVMECYPLTVLPDTLLVDVIALMNPVSRCTIDSASDFSSCVLVVEEKN-LVGI 65

Query: 330 VHFLDLLRF-GI 340
               D++R  G+
Sbjct: 66  FTLRDIVRLTGV 77


>gi|319778179|ref|YP_004134609.1| cbs domain containing protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317171898|gb|ADV15435.1| CBS domain containing protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 232

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           +     + DA  ++   +   + V+     L GII+EGD+ R                  
Sbjct: 14  IDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLRREELGTQRKRPRWLEFLV 73

Query: 280 -----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                       N   +E+VM  +      +  L   ++L+  H I  + +VD   K +G
Sbjct: 74  SPGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIKRVPIVDGD-KVVG 132

Query: 329 IVHFLDLLRF 338
           ++   DLLR 
Sbjct: 133 MIARSDLLRA 142



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  + +M      I     +  A  L+    IS L V+      +GI+   DLLR
Sbjct: 1   MQAKTIMTTPVVAIDPSASIADAAGLMLSSKISGLPVIRRDGALVGIISEGDLLR 55



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 38/101 (37%), Gaps = 6/101 (5%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           PG       +     +    +  +V       L + + +++  R   V +VD G K+ G+
Sbjct: 75  PGRVAEEYVLANGRRIEEVMTDSVVTASPNASLAEVVELMTHHRIKRVPIVD-GDKVVGM 133

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           I   D+ R     L+       M  + + I +  +  +A Q
Sbjct: 134 IARSDLLRAL---LDMQPASTPMAIDNEQIRQSIVAELAAQ 171


>gi|57239476|ref|YP_180612.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|57161555|emb|CAH58482.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +F       ++  +    S ++++  + 
Sbjct: 37  KIPIISAAMDTVTEANLAIALAQHGGIGCIHKNFSTDQQLLEVRKVKKHESWIVYNPIA- 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             V     L  A++I+ +  +  + VV   + G++L GI+T  D+    +KD     V D
Sbjct: 96  --VSPEDSLAVALSIMKKYSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVAD 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K +   + E      A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 151 IMTKDHLITVPEGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|332797947|ref|YP_004459447.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332695682|gb|AEE95149.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 129

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
                 +     L D   ++ ++  G + VVD G   KGIITE DI +    D       
Sbjct: 8   TRPPVTISSSASLKDCAKLMRKENVGSLLVVD-GDTPKGIITERDIIQAIADDYPLETPA 66

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FGII 341
             VM  N       T +  A  L+  H I  L VV +  K IG++   D+ R  G+I
Sbjct: 67  SKVMSTNLITADASTEVGDAALLMTNHKIRHL-VVTEGGKIIGVISLRDVARSLGLI 122



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +S+++++ + P  I     L    +L+R+ N+  L+VVD      GI+   D+++ 
Sbjct: 1   MSIKELITRPPVTISSSASLKDCAKLMRKENVGSLLVVDGD-TPKGIITERDIIQA 55


>gi|229003732|ref|ZP_04161544.1| Transcriptional regulator, RpiR [Bacillus mycoides Rock1-4]
 gi|228757569|gb|EEM06802.1| Transcriptional regulator, RpiR [Bacillus mycoides Rock1-4]
          Length = 288

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +++E+ +      +   A + I   K +++  G+G S       A      G  +  +  
Sbjct: 110 AAIEAGITAIDKKELEKAADAILGAK-KILFYGVGGSATPAMDGAYKFTRLGFTAMMLSD 168

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +  + + D+ + LS SG + ++  +  YA R    +IAIT  +  S +   + 
Sbjct: 169 FHMMLPLVTNLKQGDIFVALSTSGRTKDVLEMAQYASRQGATVIAITKLDQSSPLYKESH 228

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L +P   +   H +A   S + QL I DAL +       
Sbjct: 229 IRLCMPDVEQD--HRIASIASRMTQLNIIDALYVITFNRIG 267


>gi|323693066|ref|ZP_08107285.1| transcriptional regulator [Clostridium symbiosum WAL-14673]
 gi|323502820|gb|EGB18663.1| transcriptional regulator [Clostridium symbiosum WAL-14673]
          Length = 293

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 7/191 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K     G   + ++  + + + +      L    S L  E    F  A++ +   + ++ 
Sbjct: 91  KHSQLTGDVELDDTFTELSQKVLNTNISALQETYSLLDRE---TFENAIDILDRAR-KIY 146

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
             G+G SG    K  +         + +  +         +  +D  +++S+SG++ +  
Sbjct: 147 FFGVGASGLAAMKAMNKFLRIEPKVYCLQDSHMQAMAAATLGPEDAAVMISYSGATKDTI 206

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +   AR+     I IT   KS +   +D+ L           G   T++ I QL + D 
Sbjct: 207 QVAEIARKAGASTICITRFVKSPLTSFSDVTLLCGANEGPLQGG--STSAEISQLFLID- 263

Query: 189 LAIALLESRNF 199
           L       R+F
Sbjct: 264 LVYTEYYRRHF 274


>gi|153005297|ref|YP_001379622.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028870|gb|ABS26638.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 166

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 56/136 (41%), Gaps = 24/136 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSE--------------------KRFGCVAVVDEGQKLKG 265
           SG    +V    P+I     +S+                         + VV +  +L G
Sbjct: 8   SGGPPTVVPESTPMISVADFMSKDLVTVGESDDLALAESLLRLSGIRHLPVV-KDGRLVG 66

Query: 266 IITEGDIFRNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           ++T+ D+ R+         TL+V +VM ++   +   T L+ A +L+ +     L V D+
Sbjct: 67  LVTQRDVLRSGQSGRSGARTLAVSEVMTRDLTTVRPATALSQAARLMLERKYGCLPVCDE 126

Query: 323 CQKAIGIVHFLDLLRF 338
             + +GIV   D +RF
Sbjct: 127 EGRLVGIVTEADFVRF 142



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           SV D M K+   + E   L +A  LLR   I  L VV    + +G+V   D+LR G
Sbjct: 23  SVADFMSKDLVTVGESDDLALAESLLRLSGIRHLPVV-KDGRLVGLVTQRDVLRSG 77



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++ D       G+ G   +  S+VM     +  V+    L  A  ++ E+++GC+ V DE
Sbjct: 69  TQRDVLRSGQSGRSGARTLAVSEVM--TRDLTTVRPATALSQAARLMLERKYGCLPVCDE 126

Query: 260 GQKLKGIITEGDIFR 274
             +L GI+TE D  R
Sbjct: 127 EGRLVGIVTEADFVR 141


>gi|59711720|ref|YP_204496.1| DNA-binding transcriptional regulator [Vibrio fischeri ES114]
 gi|197334756|ref|YP_002155912.1| transcriptional regulator, RpiR family protein [Vibrio fischeri
           MJ11]
 gi|59479821|gb|AAW85608.1| predicted DNA-binding transcriptional regulator [Vibrio fischeri
           ES114]
 gi|197316246|gb|ACH65693.1| transcriptional regulator, RpiR family protein [Vibrio fischeri
           MJ11]
          Length = 283

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S++  A + +  +   L +  +++     F     V  +     R+ I GIG S     
Sbjct: 95  DSSLTIAQKLVQEKTHALIATTNAIN----FSEFELVTTLLNQAQRIQIVGIGGSALTAK 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            LA  L   G  +     +         +T+ D+ IV+S+SGS  E+      A      
Sbjct: 151 DLAFKLLKIGMTALTEQDSHVQIATANTLTKQDVQIVISYSGSRKEILMAAQTAMDKGAT 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +IA+TS  KS +   A+  +      +      +  +S   Q  I D L + LL+ ++
Sbjct: 211 VIALTSTKKSPLRKLANFCIDT--IADERQFRSSSISSRTAQNVITDLLFMTLLQIKS 266


>gi|18312685|ref|NP_559352.1| hypothetical protein PAE1518 [Pyrobaculum aerophilum str. IM2]
 gi|18160161|gb|AAL63534.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 141

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
              P+ D   +++E + G V +VD  + +++ G+++E D+ R    D++   SV+ +  K
Sbjct: 15  PNTPIRDVAKLMAENKVGLVVLVDPADPERVVGVVSERDVVRAVAYDVDLNASVDIIATK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +     +  A ++ R++ I   +VV    K  G++   DL+R 
Sbjct: 75  SVITLDYGESVAKAAEVFRKYGIRH-VVVTKGGKLYGVLSIRDLVRE 120


>gi|298673999|ref|YP_003725749.1| CBS domain-containing membrane protein [Methanohalobium evestigatum
           Z-7303]
 gi|298286987|gb|ADI72953.1| CBS domain containing membrane protein [Methanohalobium evestigatum
           Z-7303]
          Length = 286

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 58/121 (47%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + ++K    +  A  ++   +   + VVD+ +++ GI+T  D+ R           
Sbjct: 7   MSSPVYVLKPNDTVAHARNLMLRHKINTLIVVDDEEEMVGIVTMSDLSRKKAQSGPTWKR 66

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + ++ VM ++P  I     ++ A  ++ +++IS L V+    K  GI+   D+++
Sbjct: 67  RPVDDILIDRVMTESPLTIYSSASISQATSMMLENHISSLPVM--KNKVAGIITRTDIVK 124

Query: 338 F 338
           +
Sbjct: 125 Y 125



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     +  A +++ E     + V+    K+ GIIT  DI +   ++ +   S+ + M K
Sbjct: 85  IYSSASISQATSMMLENHISSLPVM--KNKVAGIITRTDIVKYIVENRSLEGSISEWMTK 142

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +     +   +  + + NI  L+VV+D +K +G++   DL
Sbjct: 143 NPIFVHRHHTINHVIDEMDKSNIHKLLVVNDVEKTVGMISTRDL 186



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 33/57 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++V+D+M     V+  +  +  A  L+ +H I+ L+VVDD ++ +GIV   DL R  
Sbjct: 1   MTVKDIMSSPVYVLKPNDTVAHARNLMLRHKINTLIVVDDEEEMVGIVTMSDLSRKK 57



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/141 (19%), Positives = 49/141 (34%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
              +   V     +   I  + +     + VV++ +K  G+I+  D+  N  KD      
Sbjct: 140 MTKNPIFVHRHHTINHVIDEMDKSNIHKLLVVNDVEKTVGMISTRDLALNSLKDDEGKLQ 199

Query: 282 ------------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                   +L  ED+M     VI     L  A +++   N+  L
Sbjct: 200 SKEIKMARKPETGGQRVYRDVEKVSLVAEDIMSTQLHVIDSSDSLNNATKIMIDENVLGL 259

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V ++    +GI+   D+LR 
Sbjct: 260 PVRENED-IVGIISRSDILRA 279


>gi|296271229|ref|YP_003653861.1| putative CBS domain-containing signal transduction protein
           [Thermobispora bispora DSM 43833]
 gi|296094016|gb|ADG89968.1| putative signal transduction protein with CBS domains
           [Thermobispora bispora DSM 43833]
          Length = 145

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 4/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           GT  +  +        +  V     L  A  ++ +   G + +  E  +LKGIIT+ DI 
Sbjct: 2   GTGSMRKTARDVMHRGVQCVGEHDSLRRAAQMMRDLNVGALPICGEDDRLKGIITDRDIV 61

Query: 274 R---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                   DL+  +V      +   +     +  A+Q + QH I  L V+ + ++ +G++
Sbjct: 62  VKCCAEGVDLDRTTVGQCAQGSLIWVDAQCSVEEALQKMEQHQIKRLPVI-ENKRLVGMI 120

Query: 331 HFLDLLRF 338
              DL + 
Sbjct: 121 SEADLAKE 128



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   +  DVM +  + + E   L  A Q++R  N+  L +  +  +  GI+   D+
Sbjct: 1   MGTGSMRKTARDVMHRGVQCVGEHDSLRRAAQMMRDLNVGALPICGEDDRLKGIITDRDI 60

Query: 336 L 336
           +
Sbjct: 61  V 61



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             +  S+  V   C + +A+  + + +   + V+ E ++L G+I+E D+ +    D+
Sbjct: 78  QCAQGSLIWVDAQCSVEEALQKMEQHQIKRLPVI-ENKRLVGMISEADLAKELPDDM 133


>gi|194437637|ref|ZP_03069733.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|253772673|ref|YP_003035504.1| RpiR family transcriptional regulator [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254162410|ref|YP_003045518.1| putative DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|297520281|ref|ZP_06938667.1| HTH-type transcriptional regulator murR [Escherichia coli OP50]
 gi|263504617|sp|C5W7D8|MURR_ECOBB RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504626|sp|C6UMS6|MURR_ECOBR RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|194423443|gb|EDX39434.1| transcriptional regulator, RpiR family [Escherichia coli 101-1]
 gi|242378034|emb|CAQ32805.1| MurR DNA binding transcriptional dual regulator [Escherichia coli
           BL21(DE3)]
 gi|253323717|gb|ACT28319.1| transcriptional regulator, RpiR family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253974311|gb|ACT39982.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|253978478|gb|ACT44148.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|323961229|gb|EGB56841.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H489]
 gi|323970882|gb|EGB66133.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TA007]
          Length = 285

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    ++ I   +  + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIDVISKAQ-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|262047953|ref|ZP_06020895.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293379821|ref|ZP_06625943.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|260571748|gb|EEX28327.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290923593|gb|EFE00474.1| SIS domain protein [Lactobacillus crispatus 214-1]
          Length = 284

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 74/187 (39%), Gaps = 8/187 (4%)

Query: 6   SHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
           S  K +        K   V   LR  +   +    L  ++  +       AV  IK  + 
Sbjct: 78  SQLKPIDMIVTKDDKADEVMTKLRVSL--SQNFEDLSKTIDIK---DLQKAVSLIKKSRA 132

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            V I GIG S      L   L  +G   F+      +   +   T  D++I  S+SG + 
Sbjct: 133 -VYIAGIGASSFSAKDLFYKLIRSGKTVFYNDDVHIALERIYYSTPKDVMICFSYSGLTQ 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL   +  A++   P++A+T +++S ++  ADI L LP        G     S   Q+ I
Sbjct: 192 ELLLAVKQAKKNKTPIVAVTRKSESPLSKLADINLKLPDHESLMRVGAI--NSTFAQMFI 249

Query: 186 GDALAIA 192
            + L + 
Sbjct: 250 SNVLYLC 256


>gi|257870993|ref|ZP_05650646.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           gallinarum EG2]
 gi|257805157|gb|EEV33979.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           gallinarum EG2]
          Length = 286

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 59/162 (36%), Gaps = 1/162 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  Q   A   +   + R+ + GIG S  I   +       G    F     +    L  
Sbjct: 117 LEEQVMLAAADLLKTRNRIFVCGIGASSLIAQDIQQKWTRLGKVVIFETDYNSLLPQLIK 176

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
             ++ L+  +S SG + E+  +  + +   IP++++T    + ++  AD+ L +   P+ 
Sbjct: 177 HEKECLLWAVSNSGQTPEILHLAEFTKEMGIPVLSLTRFGSNSLSKLADVPLQVS-RPKE 235

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
                A T S I  L   D L    L        + Y     
Sbjct: 236 ANMRSAATNSIIAHLLAVDVLFYVFLSKNEQLAQNIYESRQA 277


>gi|193064721|ref|ZP_03045799.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|194427293|ref|ZP_03059843.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|260845067|ref|YP_003222845.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|293415698|ref|ZP_06658341.1| HTH-type transcriptional regulator yfeT [Escherichia coli B185]
 gi|192927604|gb|EDV82220.1| transcriptional regulator, RpiR family [Escherichia coli E22]
 gi|194414614|gb|EDX30886.1| transcriptional regulator, RpiR family [Escherichia coli B171]
 gi|257760214|dbj|BAI31711.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|291433346|gb|EFF06325.1| HTH-type transcriptional regulator yfeT [Escherichia coli B185]
 gi|323159405|gb|EFZ45389.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           E128010]
          Length = 285

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    ++ I   +  + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIDVISKAQ-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|315427081|dbj|BAJ48697.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315427113|dbj|BAJ48728.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 140

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NT 282
               +  V     +  A  I++E+  G + VV  G+K  G++TE D+  R     L    
Sbjct: 12  MTADVVTVSPTTSVYAAAKIMAEEEVGSL-VVTVGEKPVGVLTERDVVRRVVAAGLSPRR 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SVEDVM     V+ E+T L  A+ ++  + +  L+VV D  K +GIV   D++R 
Sbjct: 71  TSVEDVMTSPVVVVGENTSLEEAVAIMASNRVRRLLVVRDE-KLVGIVTVTDIVRA 125



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM  +   +   T +  A +++ +  +  L VV   +K +G++   D++R
Sbjct: 8   VKDVMTADVVTVSPTTSVYAAAKIMAEEEVGSL-VVTVGEKPVGVLTERDVVR 59



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/68 (25%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G      S        + +V     L +A+ I++  R   + VV +  KL GI+T  D
Sbjct: 63  AAGLSPRRTSVEDVMTSPVVVVGENTSLEEAVAIMASNRVRRLLVVRDE-KLVGIVTVTD 121

Query: 272 IFRNFHKD 279
           I R   ++
Sbjct: 122 IVRALGEE 129


>gi|294140154|ref|YP_003556132.1| inosine-5'-monophosphate dehydrogenase [Shewanella violacea DSS12]
 gi|293326623|dbj|BAJ01354.1| inosine-5'-monophosphate dehydrogenase [Shewanella violacea DSS12]
          Length = 490

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 71/171 (41%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  +     ++  + +  + ++    ++
Sbjct: 41  NTPIVSAAMDTVTEARLAIAIAQEGGLGFIHKNMTIEQQAEEVRQVKIYEAGIVQQPVTV 100

Query: 231 PLVKIGCPLIDAITILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                   L D + IL++K  F    VV++  +L GIIT  D+   F  D  T +V+ VM
Sbjct: 101 T---PTTTLAD-LKILTKKNGFAGYPVVNDANELVGIITGRDVR--FITDW-TRTVDQVM 153

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E T L    +L+  H +  ++VVD   K  G++   D  + 
Sbjct: 154 TPKDRLVTVAEGTKLDEVQKLMHSHRVEKVLVVDANFKLKGLITVKDFQKA 204



 Score = 39.1 bits (90), Expect = 0.97,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 25/62 (40%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 VM   D +  V  G  L +   ++   R   V VVD   KLKG+IT  D  +  
Sbjct: 146 TRTVDQVMTPKDRLVTVAEGTKLDEVQKLMHSHRVEKVLVVDANFKLKGLITVKDFQKAE 205

Query: 277 HK 278
            K
Sbjct: 206 QK 207


>gi|224085680|ref|XP_002307661.1| predicted protein [Populus trichocarpa]
 gi|222857110|gb|EEE94657.1| predicted protein [Populus trichocarpa]
          Length = 201

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 63/142 (44%), Gaps = 14/142 (9%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITILSEKRFGCVAVVD--EGQ 261
           P  + G   +  +DV+ +     +      +    + DA+  +++   G + V+   E +
Sbjct: 41  PVREKGLENLTVADVLMTKGEDKIGSWLWCRTTDSVYDAVENMAKNNIGSLVVLKPGEQE 100

Query: 262 KLKGIITEGDIFRNFHKDLNT---LSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISV 316
            + GIITE D  R       +     V ++M        +  DT +  AMQL+  H+I  
Sbjct: 101 LIAGIITERDYMRKIIAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMTDHHIRH 160

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + V+D   K +G+V  +D++R 
Sbjct: 161 VPVID--GKIVGMVSIVDVVRA 180



 Score = 42.6 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 2/78 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          + +    ++M   D +  V     ++ A+ ++++     V V+D
Sbjct: 106 ITERDYMRKIIAQGRSSKYTRVGEIMTDEDKLVTVTSDTSILQAMQLMTDHHIRHVPVID 165

Query: 259 EGQKLKGIITEGDIFRNF 276
              K+ G+++  D+ R  
Sbjct: 166 --GKIVGMVSIVDVVRAV 181


>gi|254468153|ref|ZP_05081559.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
 gi|207086963|gb|EDZ64246.1| inosine-5'-monophosphate dehydrogenase [beta proteobacterium KB13]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       LAIA+ E          ++H            S V         
Sbjct: 40  NIPLLSAAMDTVTESELAIAMAEEGGIG-----IIHKNMSPKHQAEHVSKVKRFESGVVL 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +  ++     + + I +  + +   + V+ EG K+ GI+T  D+   F ++LN   V++V
Sbjct: 95  NPIVIDPNMTVDEVINLTKKHKISGLPVI-EGNKVVGIVTNRDLR--FEENLNQ-PVKNV 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E       M+LL Q+ +  L+V+D+  +  G++   D+ +
Sbjct: 151 MTPRERLVTVNEKASKEEVMRLLHQYRLERLLVIDNNDQLKGLITVKDIQK 201


>gi|313896812|ref|ZP_07830359.1| CBS domain protein [Selenomonas sp. oral taxon 137 str. F0430]
 gi|312974259|gb|EFR39727.1| CBS domain protein [Selenomonas sp. oral taxon 137 str. F0430]
          Length = 214

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
               +   +     L +A  ++ +  F  + VV E  +L G  T  D+ R          
Sbjct: 6   CMTKNPVTIAPDAGLGEAAKVMEKGGFRRLPVV-EHGRLVGFFTNRDLLRASPSAATTLD 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V DVM KN   + +   +  A  +L +  I  + V+    K +GI+  
Sbjct: 65  RFEERTLLSKIKVADVMQKNVVTVTDTMTIEEAALILSREKIGGMPVLSSAGKLVGIISS 124

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 125 TDIFKA 130



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE+ M KNP  I  D  L  A +++ +     L VV +  + +G     DLLR 
Sbjct: 3   VENCMTKNPVTIAPDAGLGEAAKVMEKGGFRRLPVV-EHGRLVGFFTNRDLLRA 55



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 28/63 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            TL            ++  V     + +A  ILS ++ G + V+    KL GII+  DIF
Sbjct: 69  RTLLSKIKVADVMQKNVVTVTDTMTIEEAALILSREKIGGMPVLSSAGKLVGIISSTDIF 128

Query: 274 RNF 276
           + F
Sbjct: 129 KAF 131


>gi|226942746|ref|YP_002797819.1| cyclic nucleotide-binding protein [Azotobacter vinelandii DJ]
 gi|226717673|gb|ACO76844.1| cyclic nucleotide-binding protein [Azotobacter vinelandii DJ]
          Length = 645

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 53/112 (47%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
           +         G  L +A+ +++E + G + +VD  +   GI T  D+ +   +    L  
Sbjct: 183 TARRPVFCTGGTSLREAVRLMNEHQVGSLVMVDAAEFPVGIFTLRDLRQVIAEGSGDLEQ 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++++M+++P  +        A   + + +I+ + VV++  + +G++   DL
Sbjct: 243 PLDELMVRDPARLPPSATAFDAALTMTRRHIAHICVVEND-RLVGVISERDL 293



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++  + P      T L  A++L+ +H +  L++VD  +  +GI    DL
Sbjct: 176 DTRLGELTARRPVFCTGGTSLREAVRLMNEHQVGSLVMVDAAEFPVGIFTLRDL 229


>gi|323452546|gb|EGB08420.1| hypothetical protein AURANDRAFT_26475 [Aureococcus anophagefferens]
          Length = 295

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 47/113 (41%), Gaps = 3/113 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
            ++  +++    + D    ++ KR  C  +      L GI+T+ D+ R       DL   
Sbjct: 36  PEAPVVLEASTAISDVCKAMAAKRTDCALLTSAVGTLAGIVTDNDVARKAVAEGLDLAAT 95

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VE +M + P  +        A++ +  ++   L V+ D    +G+++    L
Sbjct: 96  PVERIMTRGPTCVRAGDGAIDALRSMVSNHFRHLPVLGDTGAIVGVLNIHRCL 148



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 29/157 (18%), Positives = 55/157 (35%), Gaps = 7/157 (4%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL---HPGGKLGT 215
           VL + +        +    ++     + +++  AL + +  +      L         G+
Sbjct: 141 VLNIHRCLYEAIEKIEKLEASAKGSDVAESMLRALAKRKGANPKQLAKLVGPLMESLAGS 200

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFR 274
                  V+  G +  LV     + DA   ++  R     +      L GI+T  D + R
Sbjct: 201 SAKTLRSVLDDGRTDCLVDAAASVRDAARTIASTR--RAVLATADGGLAGILTPKDVLNR 258

Query: 275 NFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              +D  T   +  VM  NP  I  D  L  A+ ++ 
Sbjct: 259 VVARDAATSTPLAAVMTPNPDTIALDATLLEALHMMH 295


>gi|257209009|emb|CBB36473.1| Arabidopsis protein targeted to mitochondria proteins At5g10860
           [Saccharum hybrid cultivar R570]
          Length = 205

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GI+TE D  R      +   +  V 
Sbjct: 73  WCTTEDTVYDAVKSMTQHNVGALVVVKPGEDKSIAGIVTERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+D  +   G+V   D++R 
Sbjct: 133 DIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDGTEML-GMVSIGDVVRA 185



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 34/77 (44%), Gaps = 1/77 (1%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+D 
Sbjct: 111 TERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVNPNTKVLQAMQLMTDNRIRHIPVIDG 170

Query: 260 GQKLKGIITEGDIFRNF 276
            + L G+++ GD+ R  
Sbjct: 171 TEML-GMVSIGDVVRAV 186


>gi|329119489|ref|ZP_08248174.1| inosine-5'-monophosphate dehydrogenase [Neisseria bacilliformis
           ATCC BAA-1200]
 gi|327464422|gb|EGF10722.1| inosine-5'-monophosphate dehydrogenase [Neisseria bacilliformis
           ATCC BAA-1200]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H            + V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPEMQAKAVAKVKRHESGIVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               V     + + + + ++++     + VV +  K+ GI+T  D+     ++   L V 
Sbjct: 95  DPVTVAPDVLIGELLQLRAQRKRKMSGLPVV-QNGKVVGIVTNRDLRF---ENRLDLPVS 150

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        + E T +  A +L+  H +  ++V++D  +  G++   D+L+
Sbjct: 151 AIMTPRERLVTVAEGTSIDEARELMHAHKVERVLVLNDQDELKGLITVKDILK 203


>gi|315656165|ref|ZP_07909056.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
 gi|315493167|gb|EFU82767.1| CBS domain protein/ACT domain-containing protein [Mobiluncus
           curtisii subsp. holmesii ATCC 35242]
          Length = 212

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
               +   +  G  + DAI ++       + V+    KL G++++ D+ R    D     
Sbjct: 6   RMTANPFTIDSGATVPDAIELMQTHGITKLPVL-RDGKLCGVVSQLDLNRALPSDATSLS 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ L +  +M KNP  I+ D +L  A  L+R   + +L V+D+  K +G++  
Sbjct: 65  FGEVAYLLSKLKIYKIMRKNPPTIVPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITE 123

Query: 333 LDLLRF 338
            D+L  
Sbjct: 124 SDVLDA 129


>gi|228957141|ref|ZP_04118908.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
 gi|229042583|ref|ZP_04190324.1| CBS domain protein [Bacillus cereus AH676]
 gi|229126148|ref|ZP_04255166.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
 gi|228657140|gb|EEL12960.1| CBS domain protein [Bacillus cereus BDRD-Cer4]
 gi|228726676|gb|EEL77892.1| CBS domain protein [Bacillus cereus AH676]
 gi|228802468|gb|EEM49318.1| CBS domain protein [Bacillus thuringiensis serovar pakistani str.
           T13001]
          Length = 147

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +     + S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIIMTRVRDLMSTHIVHCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 66


>gi|225434277|ref|XP_002262902.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
 gi|225434279|ref|XP_002262927.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
 gi|225434281|ref|XP_002262956.1| PREDICTED: hypothetical protein isoform 3 [Vitis vinifera]
          Length = 205

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  ++    G + VV   E + + GIITE D  R      +   +  V 
Sbjct: 73  WCTTDDSVYDAVKSMTHHNVGALVVVKPGEQKSIAGIITERDYLRKIIVQGRSSKSTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  +T +  AMQL+  + I  + V+DD ++ IG+V   D++R 
Sbjct: 133 DIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVIDD-KEMIGMVSIGDVVRA 185



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ ++++ R   + V+D
Sbjct: 110 ITERDYLRKIIVQGRSSKSTKVGDIMTEENKLITVSPNTKVLRAMQLMTDNRIRHIPVID 169

Query: 259 EGQKLKGIITEGDIFRNF 276
           + + + G+++ GD+ R  
Sbjct: 170 DKE-MIGMVSIGDVVRAV 186


>gi|313235700|emb|CBY11152.1| unnamed protein product [Oikopleura dioica]
          Length = 158

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 48/124 (38%), Gaps = 29/124 (23%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-----------------------------RNF 276
           L EKR     V+D+  KL G++++ D+                              +  
Sbjct: 24  LYEKRITGFPVIDDDWKLVGLVSDYDLLALDSISGSGRADNSMFPEVDSTWKTFNEVQKL 83

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               N   V D+M   P V+ E T L  A +LL +     L VVD   K +GI+   +++
Sbjct: 84  LSKTNGKMVGDLMTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVV 143

Query: 337 RFGI 340
           R  +
Sbjct: 144 RAAL 147



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +  +V+    L DA  +L E ++  + VVD   KL GIIT G++ R 
Sbjct: 96  MTPAPVVVRETTNLEDAARLLLETKYRRLPVVDADGKLVGIITRGNVVRA 145


>gi|294664077|ref|ZP_06729477.1| inositol-5-monophosphate dehydrogenase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292606151|gb|EFF49402.1| inositol-5-monophosphate dehydrogenase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKK 203


>gi|294624728|ref|ZP_06703394.1| inositol-5-monophosphate dehydrogenase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292600962|gb|EFF45033.1| inositol-5-monophosphate dehydrogenase [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKK 203


>gi|291614479|ref|YP_003524636.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
 gi|291584591|gb|ADE12249.1| CBS domain containing protein [Sideroxydans lithotrophicus ES-1]
          Length = 143

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +      +  V     +  A+ ++ E+  G V VV E  KL G+ TE D           
Sbjct: 8   LAEKTKPLTTVSPDDTVHYALVLMRERDIGAVMVV-EQGKLIGVFTERDCLHKVSSLCLN 66

Query: 283 LS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                V +VM    + +     ++  + L+ +     L V+DD +  +GIV   DL++  
Sbjct: 67  PKEVLVREVMSTKVRYVTTAMGVSQCLALMTERFFRHLPVLDDQKNILGIVSIGDLVKAR 126

Query: 340 I 340
           +
Sbjct: 127 L 127


>gi|222481006|ref|YP_002567243.1| peptidase M50 [Halorubrum lacusprofundi ATCC 49239]
 gi|222453908|gb|ACM58173.1| peptidase M50 [Halorubrum lacusprofundi ATCC 49239]
          Length = 394

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 1/120 (0%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +DVM   + +  V     + D ++ + E+R     V+  G  L G++T  D       
Sbjct: 249 TVADVMTRREDLHTVTGDTSVADLMSRMFEERHTGYPVL-HGGNLVGMVTLEDARSVRDV 307

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +   V DVM      +  +     A+Q ++++ +  L VVD   + +G++   DL+  
Sbjct: 308 ERDAYQVADVMETEVVGVGPEADAMTALQTMQENGVGRLPVVDRSDELVGLISRSDLMTA 367



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V      + A+  + E   G + VVD   +L G+I+  D+   F+
Sbjct: 325 VGPEADAMTALQTMQENGVGRLPVVDRSDELVGLISRSDLMTAFN 369



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLL-RQHNISVLMVVDDCQKAIGIVHF 332
                  ++V DVM +  +   +  DT +   M  +  + + +   V+      +G+V  
Sbjct: 241 LKAAFEDVTVADVMTRREDLHTVTGDTSVADLMSRMFEERH-TGYPVL-HGGNLVGMVTL 298

Query: 333 LD 334
            D
Sbjct: 299 ED 300


>gi|294495070|ref|YP_003541563.1| homoserine O-acetyltransferase [Methanohalophilus mahii DSM 5219]
 gi|292666069|gb|ADE35918.1| homoserine O-acetyltransferase [Methanohalophilus mahii DSM 5219]
          Length = 483

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
             GC L +A  ++  K    + ++    ++ GI+T  DI R     ++  S+E+++ ++ 
Sbjct: 375 HEGCTLEEAAQLMILKNATHIPILATSGRITGIVTSWDITRAVANKIS--SIENILSRDI 432

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                D  L+ A  ++  H IS L VVDD    +GI+ 
Sbjct: 433 LTSRPDESLSSAALVMEDHAISALPVVDDRGCLVGILS 470



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 30/69 (43%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +       L  L+V DVM ++   + E   L  A QL+   N + + ++    +  GI
Sbjct: 348 GQLNYLLSTFLGHLTVGDVMSEDVSTLHEGCTLEEAAQLMILKNATHIPILATSGRITGI 407

Query: 330 VHFLDLLRF 338
           V   D+ R 
Sbjct: 408 VTSWDITRA 416


>gi|90577691|ref|ZP_01233502.1| transcriptional regulator, RpiR family protein [Vibrio angustum
           S14]
 gi|90440777|gb|EAS65957.1| transcriptional regulator, RpiR family protein [Vibrio angustum
           S14]
          Length = 283

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S++  A + I  +   + +  +++      +F   V+++     R+ I GIG S     
Sbjct: 95  DSSITIAQKLIQEKTHAMIATTNAIN---FSEFETIVKRLNQAH-RIQIVGIGGSALTAK 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G  +               +T++D++I +S+SG   E+      A      
Sbjct: 151 DLTFKLLKLGITALTEQDTHVQIATANTLTKNDILIAISFSGKRREIIMAAQSAYDKGAT 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +IA+T+  KS +   A   +      +      +  +S   Q  I D L + LL+ ++
Sbjct: 211 VIALTNIKKSPLRQLAHYTIDT--IADEKQFRSSAISSRTAQNVITDLLFMVLLQLKS 266


>gi|332664415|ref|YP_004447203.1| CBS domain-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333229|gb|AEE50330.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 636

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
           V+    +     ++  +R   + V D    L G+IT   + R+  K           V+D
Sbjct: 516 VQKDDLIQLVANLMDWRRIRYLPVEDTKGHLCGLITSRLVLRHLSKQTELDQPGAQQVQD 575

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +MI  P  +    L+  A++L+R   I  L VV   ++ +GI+   D L
Sbjct: 576 IMIAEPVSVHPSMLILDAIKLMRDKKIGCLPVV-QNEELVGIITENDFL 623



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +TL VE+ M  +   + +D L+ +   L+    I  L V D      G++ 
Sbjct: 501 STLKVEEFMTTDLFTVQKDDLIQLVANLMDWRRIRYLPVEDTKGHLCGLIT 551



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           V     ++DAI ++ +K+ GC+ VV + ++L GIITE D      + +  L
Sbjct: 584 VHPSMLILDAIKLMRDKKIGCLPVV-QNEELVGIITENDFLDITARLIEQL 633


>gi|319943797|ref|ZP_08018078.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC
           51599]
 gi|319743030|gb|EFV95436.1| inosine-5'-monophosphate dehydrogenase [Lautropia mirabilis ATCC
           51599]
          Length = 488

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 7/169 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M      ++AI + +           L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTESSMAIVMAQLGGIGIIH-KNLKPERQAAEVLAVKRYESGVVGDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +     + + I I  E R   + VV+ G +K+ GI+T  D+      D     V ++M  
Sbjct: 99  ITPEMTVREVIAITREHRISGLPVVEGGSRKVVGIVTNRDLRFESELD---QPVRNIMTP 155

Query: 292 N--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 + E + L  A +L+ +H +  ++VV+D  +  G++   D+L+ 
Sbjct: 156 RERLITVPEGSSLDDAQKLMHKHRLERVLVVNDAFELRGLMTVKDILKA 204


>gi|260438852|ref|ZP_05792668.1| inosine-5'-monophosphate dehydrogenase [Butyrivibrio crossotus DSM
           2876]
 gi|292808691|gb|EFF67896.1| inosine-5'-monophosphate dehydrogenase [Butyrivibrio crossotus DSM
           2876]
          Length = 484

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 64/168 (38%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NVPIMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F KD  T  +++ 
Sbjct: 96  DPFFLSPEHTLQDADNLMAKFRISGVPIT-EGRKLVGIITNRDLK--FEKD-YTKKIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N         L  A  +L +  +  L +VDD     G++   D+
Sbjct: 152 MTSENLVTAKVGITLEDAKAILAKARVEKLPIVDDDFNLRGLITIKDI 199


>gi|229108329|ref|ZP_04237946.1| CBS domain protein [Bacillus cereus Rock1-15]
 gi|228674956|gb|EEL30183.1| CBS domain protein [Bacillus cereus Rock1-15]
          Length = 132

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 1   MSTHIVHCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 60  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 110



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 1   MSTHIVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 51


>gi|162447131|ref|YP_001620263.1| RpiR family transcriptional regulator [Acholeplasma laidlawii
           PG-8A]
 gi|161985238|gb|ABX80887.1| transcriptional regulator, RpiR family [Acholeplasma laidlawii
           PG-8A]
          Length = 281

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/155 (23%), Positives = 64/155 (41%), Gaps = 3/155 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  + +LE ++       +  A   I   + +++I G G S  +   L   L        
Sbjct: 102 ENNIRALEETINLYDEKTYTKAASLIMNAR-KILIFGKGSSFLVCKDLEMKLRRINKFCV 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +     D   I   D++I +S SG + E+ +    A+    P+I+IT    S++A 
Sbjct: 161 AQGESHDQFVDASFINNKDVVIFISNSGKTKEIISSALLAKENKTPIISITRIGSSILAD 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +D+VL             A  TS I Q+++ DAL
Sbjct: 221 ISDVVLYTSALESEFR--SAAMTSRISQMSVVDAL 253


>gi|163843518|ref|YP_001627922.1| CBS domain-containing protein [Brucella suis ATCC 23445]
 gi|225627721|ref|ZP_03785758.1| CBS domain-containing protein [Brucella ceti str. Cudo]
 gi|225852750|ref|YP_002732983.1| CBS domain-containing protein [Brucella melitensis ATCC 23457]
 gi|237815671|ref|ZP_04594668.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
 gi|256369677|ref|YP_003107187.1| CBS domain containing protein [Brucella microti CCM 4915]
 gi|297248558|ref|ZP_06932276.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
 gi|163674241|gb|ABY38352.1| CBS domain containing protein [Brucella suis ATCC 23445]
 gi|225617726|gb|EEH14771.1| CBS domain-containing protein [Brucella ceti str. Cudo]
 gi|225641115|gb|ACO01029.1| CBS domain containing protein [Brucella melitensis ATCC 23457]
 gi|237788969|gb|EEP63180.1| CBS domain-containing protein [Brucella abortus str. 2308 A]
 gi|255999839|gb|ACU48238.1| CBS domain containing protein [Brucella microti CCM 4915]
 gi|297175727|gb|EFH35074.1| CBS domain-containing protein [Brucella abortus bv. 5 str. B3196]
          Length = 157

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 5/135 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                   +    ++ +     +V      L  A+ +L++ + G + V DE   ++GI++
Sbjct: 7   AKPWRDFGMTVRSILETKGRDVVVIASADTLSQAVAMLNKHKIGALVVCDEAGHIEGILS 66

Query: 269 EGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           E D+ R          + SV +VM    +V  E   +   M+++ +     + V ++  K
Sbjct: 67  ERDVVRALAAQESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGK 125

Query: 326 AIGIVHFLDLLRFGI 340
            +GI+   D+++  I
Sbjct: 126 LVGIISIGDVVKRRI 140



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +  +  S        + +      +   + I++  RF  + V +EG KL GII+ GD+ 
Sbjct: 78  ESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIGDVV 136

Query: 274 RNFHKDLNTLSVEDV 288
           +   +D+     ED+
Sbjct: 137 KRRIEDV-EREAEDI 150


>gi|156973389|ref|YP_001444296.1| inositol-5-monophosphate dehydrogenase [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524983|gb|ABU70069.1| hypothetical protein VIBHAR_01076 [Vibrio harveyi ATCC BAA-1116]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEKQAAEVRKVKKFEAGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    V+ E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPEATIADVVALTEKHGFAGFPVITENNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N   I E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 AKENLAAIKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|21243023|ref|NP_642605.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas axonopodis pv.
           citri str. 306]
 gi|21108532|gb|AAM37141.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas axonopodis pv.
           citri str. 306]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKK 203


>gi|325925930|ref|ZP_08187298.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas perforans
           91-118]
 gi|325543653|gb|EGD15068.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas perforans
           91-118]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKK 203


>gi|170291220|ref|YP_001738036.1| sugar isomerase (SIS) [Candidatus Korarchaeum cryptofilum OPF8]
 gi|170175300|gb|ACB08353.1| sugar isomerase (SIS) [Candidatus Korarchaeum cryptofilum OPF8]
          Length = 201

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 46/207 (22%), Positives = 74/207 (35%), Gaps = 26/207 (12%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           +M    V+   + I   K  L    S++  E +  F  A+ +    +G++ + G G+SG 
Sbjct: 1   MMGTPVVEKIGKLIEVVKENL----STVDDESANMFIKALFRTMG-EGKIFVVGAGRSGL 55

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    A  L   G   + V            +   DL+I +S SG +         A+  
Sbjct: 56  VAKAFAMRLLHVGFQVYVVGETVTP-----SMRSGDLLIAVSGSGETKFPVTAAQVAKSV 110

Query: 138 SIPLIAITSENKSVVACHADIVLTLP--KEPESCPHG------------LAPTTSAIM-- 181
              +IAITS   S +   AD V+ +     PE                 L P  +     
Sbjct: 111 GAHVIAITSYPDSTLGKIADFVVRIGGRVLPEDESRDYFTRQILGIHEPLTPLGTLFELS 170

Query: 182 QLAIGDALAIALLESRNFSENDFYVLH 208
            +   DAL   ++E    SE D    H
Sbjct: 171 AMIYLDALISEIVELMGKSEEDLARRH 197


>gi|50955518|ref|YP_062806.1| inosine-5'-monophosphate dehydrogenase [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50952000|gb|AAT89701.1| inosine-5'-monophosphate dehydrogenase [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 500

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL- 232
           +P  S+ M       + +A+  +R+      +         T             + P+ 
Sbjct: 45  SPLLSSAMDTVTEARMGVAM--ARHGGIGIIHRNLSIDDQATQVDKVKRSESGMITNPVT 102

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + +   +  + R   + VV+    L GI+T  D+      +  T  V +VM + 
Sbjct: 103 ITPEATVEEVDQLCGQFRVSGLPVVEGDGTLVGIVTNRDMRFVSPSERATALVREVMTRQ 162

Query: 293 PKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           P +          A+ +  +  I  L +VD   K  G++   D
Sbjct: 163 PLITAPVGIDPDAAVAIFAERKIEKLPLVDADGKLRGLITVKD 205



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 45/117 (38%), Gaps = 15/117 (12%)

Query: 226 SGDSIPLVKIGCPL-IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           S      V++  PL   A+  ++E R G       G    GII      RN   D     
Sbjct: 34  STFLTRRVRMASPLLSSAMDTVTEARMGVAMARHGG---IGII-----HRNLSIDDQATQ 85

Query: 285 VEDV------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+ V      MI NP  I  +  +    QL  Q  +S L VV+     +GIV   D+
Sbjct: 86  VDKVKRSESGMITNPVTITPEATVEEVDQLCGQFRVSGLPVVEGDGTLVGIVTNRDM 142


>gi|257095292|ref|YP_003168933.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257047816|gb|ACV37004.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 636

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN-TLSVEDVMI 290
           V     +   + +++ +  G + VVD  Q+  GI T  D + R     ++   ++  VM 
Sbjct: 181 VAPETSIRQVVELMASRHLGSMVVVDSAQQPIGIFTLSDVLKRIVLPGVSLEQTIASVMS 240

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P  +        A   +  H +  ++ VD+  +  G+V   DL + 
Sbjct: 241 PAPLTLPLAANAHDAALTMAMHAVRHVLAVDEGGRLKGVVSERDLFKL 288



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 31/64 (48%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   +      +  ++ + P  +  +T +   ++L+   ++  ++VVD  Q+ IGI    
Sbjct: 159 RATEQKTMNSPLSAIVKREPVAVAPETSIRQVVELMASRHLGSMVVVDSAQQPIGIFTLS 218

Query: 334 DLLR 337
           D+L+
Sbjct: 219 DVLK 222


>gi|298345503|ref|YP_003718190.1| putative acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
           43063]
 gi|298235564|gb|ADI66696.1| possible acetoin dehydrogenase AcuB [Mobiluncus curtisii ATCC
           43063]
          Length = 206

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------L 280
           +  G  + DAI ++       + V+    KL G++++ D+ R    D            L
Sbjct: 8   IDSGATVPDAIELMQTHGITKLPVL-RDGKLCGVVSQLDLNRALPSDATSLSFGEVAYLL 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L +  +M KNP  I  D +L  A  L+R   + +L V+D+  K +G++   D+L  
Sbjct: 67  SKLKIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITESDVLDA 123



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  NP  I     +  A++L++ H I+ L V+    K  G+V  LDL R 
Sbjct: 1   MTANPFTIDSGATVPDAIELMQTHGITKLPVL-RDGKLCGVVSQLDLNRA 49



 Score = 36.0 bits (82), Expect = 9.1,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G++  L            + P +     L +A  ++ + +   + V+DE  K+ G+ITE 
Sbjct: 60  GEVAYLLSKLKIYKIMRKNPPTIAPDAMLEEAAILMRDTKVEILPVLDE-GKVVGVITES 118

Query: 271 DIFRNF 276
           D+   F
Sbjct: 119 DVLDAF 124


>gi|209966709|ref|YP_002299624.1| CBS domain protein [Rhodospirillum centenum SW]
 gi|209960175|gb|ACJ00812.1| CBS domain protein [Rhodospirillum centenum SW]
          Length = 142

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNT 282
               + LV  G  L +A   + +   G + V  E  +L G +T+ DI  R   +  D N+
Sbjct: 7   MTKDVELVNPGTTLKEAARKMRDADTGFLPV-GENDRLVGTVTDRDITVRCVAEGADPNS 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +V D M      + +D   + A QL+ + ++  L V++  ++ +G+V   D+   G
Sbjct: 66  AAVRDAMTDELVFVFDDQDSSEAAQLMSERSVRRLPVLNRDKRLVGVVSLGDVAARG 122



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + D+M K+ +++   T L  A + +R  +   L V  +  + +G V   D+ 
Sbjct: 1   MQIRDIMTKDVELVNPGTTLKEAARKMRDADTGFLPV-GENDRLVGTVTDRDIT 53


>gi|152997991|ref|YP_001342826.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150838915|gb|ABR72891.1| CBS domain containing protein [Marinomonas sp. MWYL1]
          Length = 133

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 13/123 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              ++  V +   L +   I+    F  + V ++  KL GII++ D+ R           
Sbjct: 7   MVKNVICVDMDERLPNVKQIMETNGFHHLPVTEKD-KLVGIISDRDLLRLISPFIDSASE 65

Query: 278 --KDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +DL+TL  +   VM + P  +  +T +   +  L++ +IS L V DD    IGI+ + 
Sbjct: 66  QPRDLDTLNRAAHQVMTRQPITVRAETPVEEIVAWLKRVDISCLPVTDDEDHVIGIISWR 125

Query: 334 DLL 336
           DL+
Sbjct: 126 DLV 128



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +D+M+KN   +  D  L    Q++  +    L V +   K +GI+   DLLR 
Sbjct: 1   MKAQDIMVKNVICVDMDERLPNVKQIMETNGFHHLPVTEKD-KLVGIISDRDLLRL 55


>gi|221065849|ref|ZP_03541954.1| CBS domain containing protein [Comamonas testosteroni KF-1]
 gi|264679584|ref|YP_003279491.1| signal-transduction protein with CBS [Comamonas testosteroni CNB-2]
 gi|220710872|gb|EED66240.1| CBS domain containing protein [Comamonas testosteroni KF-1]
 gi|262210097|gb|ACY34195.1| putative signal-transduction protein with CBS [Comamonas
           testosteroni CNB-2]
          Length = 151

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 61/127 (48%), Gaps = 6/127 (4%)

Query: 217 FVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               ++++ +  +  +  V     ++ A+ +++EK  G + V+ EG ++ GI+TE D  R
Sbjct: 1   MTTVAEILRAKGNSTIYSVSPSDTMLAALQLMAEKSIGALLVL-EGGEIAGIVTERDYAR 59

Query: 275 NFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +   +  V++VM +    +L        M L+  + +  L V+++ ++  G++ 
Sbjct: 60  KIALQGRSSASTRVDEVMTRKVHCVLPRQTSEECMSLMTSNRMRHLPVINETRELQGLIS 119

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 120 IGDIVKE 126



 Score = 39.5 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 31/77 (40%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+         G               +  V       + +++++  R   + V++E
Sbjct: 53  TERDYA--RKIALQGRSSASTRVDEVMTRKVHCVLPRQTSEECMSLMTSNRMRHLPVINE 110

Query: 260 GQKLKGIITEGDIFRNF 276
            ++L+G+I+ GDI +  
Sbjct: 111 TRELQGLISIGDIVKEI 127


>gi|298241060|ref|ZP_06964867.1| putative signal transduction protein with CBS domains
           [Ktedonobacter racemifer DSM 44963]
 gi|297554114|gb|EFH87978.1| putative signal transduction protein with CBS domains
           [Ktedonobacter racemifer DSM 44963]
          Length = 155

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V     +  A  +LSE +   + VV+    + GI+TE D+            V
Sbjct: 7   MTRDVIVVNEDQTMQQAAHLLSEYKISGMPVVNSDNVIVGIVTEFDVIAR-----KGQLV 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M ++   + E+T L    ++L    I  L+VV    + +GI+  +DL++ 
Sbjct: 62  RDIMTRSVITVSEETELEEVSRILVHERIRRLLVV-SRGRLVGIISRVDLVKA 113



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD-LLRFG 339
           + V +VM ++  V+ ED  +  A  LL ++ IS + VV+     +GIV   D + R G
Sbjct: 1   MKVRNVMTRDVIVVNEDQTMQQAAHLLSEYKISGMPVVNSDNVIVGIVTEFDVIARKG 58


>gi|73539746|ref|YP_294266.1| CBS [Ralstonia eutropha JMP134]
 gi|72117159|gb|AAZ59422.1| CBS [Ralstonia eutropha JMP134]
          Length = 146

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +  A+ +++EK  G V V+ E  K+ GI++E D  R      +      V D+M
Sbjct: 19  IPPTATVYAALQLMAEKGIGAVLVM-EHGKIVGILSERDYARKVILMQRSSRDTLVRDIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +   +  D      M L+ +H +  L V++     IG++   DL++
Sbjct: 78  TSSVIYVSGDQSTDECMALMTKHRMRHLPVMNGED-LIGMLSIGDLVK 124


>gi|17549775|ref|NP_523115.1| putative transcription regulation repressor HEXR transcription
           regulator protein [Ralstonia solanacearum GMI1000]
 gi|17432030|emb|CAD18707.1| putative transcription regulation repressor hexr transcription
           regulator protein [Ralstonia solanacearum GMI1000]
          Length = 277

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L+ L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 106 RILQDTIDALALLRDQLDAR---ALDAAVALLEAAR-RIDLYGFGSSGVVARDAQTKFFR 161

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 162 YGIAADAYSDPYLMSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 220

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 221 GSRLAALADVTLPAGVEAD 239


>gi|227828412|ref|YP_002830192.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|229585641|ref|YP_002844143.1| signal transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238620604|ref|YP_002915430.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|227460208|gb|ACP38894.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228020691|gb|ACP56098.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238381674|gb|ACR42762.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|323475485|gb|ADX86091.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478207|gb|ADX83445.1| putative signal transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 277

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 51/118 (43%), Gaps = 2/118 (1%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  + +   +   +        A+ I+  + FG + VVD   K  GIITE +    
Sbjct: 70  RISTTPVIDYMTPNPVTIYNTTDEFTALNIMVTRNFGSLPVVDINDKPVGIITEREFL-L 128

Query: 276 FHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +KDL+    V+  M    + I +D  L  A++L+ +     L V++D  K +GI+  
Sbjct: 129 LYKDLDEIFPVKVFMSTKVRTIYKDVRLDQAVRLMLRRGFRRLPVINDDNKVVGIITV 186



 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  +     L  A+ ++  + F  + V+++  K+ GIIT  +  R   K ++ L  
Sbjct: 143 MSTKVRTIYKDVRLDQAVRLMLRRGFRRLPVINDDNKVVGIITVVNAIRQLAKAVDKLDP 202

Query: 284 ------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +V+DVM+ N   I E   +  A   +    I  L++++      GI+   DLL
Sbjct: 203 DYFYNKAVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTVKGIITERDLL 261



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              + P++     L  A   ++E   G + + +E  K++G++T  D+             
Sbjct: 7   MIRNPPILSKEDRLGLAFKKINEGGIGRIIIANE--KMEGLLTTRDLLSTVESYCKDNCS 64

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 ++T  V D M  NP  I   T    A+ ++   N   L VVD   K +GI+ 
Sbjct: 65  QGDLYRISTTPVIDYMTPNPVTIYNTTDEFTALNIMVTRNFGSLPVVDINDKPVGIIT 122



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 12/41 (29%), Positives = 21/41 (51%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             +  A   +  KR G + ++++   +KGIITE D+    H
Sbjct: 225 ASVNRAAAEMIVKRIGSLLILNKDNTVKGIITERDLLIALH 265


>gi|220913521|ref|YP_002488830.1| signal transduction protein with CBS domains [Arthrobacter
           chlorophenolicus A6]
 gi|219860399|gb|ACL40741.1| putative signal transduction protein with CBS domains [Arthrobacter
           chlorophenolicus A6]
          Length = 141

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  VK    L++A   + +   G + +  +  KLKG+IT+ DI        +D   
Sbjct: 8   MTTDARCVKENESLVEAARTMRDMDCGSLPICGDDGKLKGMITDRDIVLKCVAAGRDPGQ 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++    P  I  D  +  A+ ++ +H +  L V+    K +GI+   D+ R
Sbjct: 68  VMARELASGTPHWIDADANVDAAIDMMEKHQVRRLPVI-ADHKLVGIISQGDIAR 121



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M  + + + E+  L  A + +R  +   L +  D  K  G++   D++
Sbjct: 4   VREFMTTDARCVKENESLVEAARTMRDMDCGSLPICGDDGKLKGMITDRDIV 55



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 31/77 (40%), Gaps = 1/77 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G           +  +   +     +  AI ++ + +   + V+    KL GII++GD
Sbjct: 60  AAGRDPGQVMARELASGTPHWIDADANVDAAIDMMEKHQVRRLPVI-ADHKLVGIISQGD 118

Query: 272 IFRNFHKDLNTLSVEDV 288
           I RN+ +      VE +
Sbjct: 119 IARNYSEQRVGELVEHI 135


>gi|218134079|ref|ZP_03462883.1| hypothetical protein BACPEC_01969 [Bacteroides pectinophilus ATCC
           43243]
 gi|217991454|gb|EEC57460.1| hypothetical protein BACPEC_01969 [Bacteroides pectinophilus ATCC
           43243]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  E  KL GIIT  D+   F +D +   +++ 
Sbjct: 96  DPFYLSPDNTLEDANNLMAKFRISGVPIT-ENGKLVGIITNRDLK--FEEDFSR-PIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N         L  A ++L +     L +VD+     G++   D+
Sbjct: 152 MTSENLVTAPVGITLDEAKKILAKARKEKLPIVDENFNLKGLITIKDI 199


>gi|88657908|ref|YP_507045.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia chaffeensis str.
           Arkansas]
 gi|88599365|gb|ABD44834.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia chaffeensis str.
           Arkansas]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 42/174 (24%), Positives = 72/174 (41%), Gaps = 16/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIAL +           +H    + T  +    V         
Sbjct: 37  RIPIISAAMDTVTEAKLAIALAQHGGIG-----CIHKNLPIDTQLLEVRKVKKYESWIVY 91

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +   V     L  A++I+ E  +  + VV   + G+ L GI+T  D+    +K+     V
Sbjct: 92  NPIAVSPDDSLAVALSIMQEYSYSGIPVVTDTENGKLLVGILTNRDVRFVENKNC---KV 148

Query: 286 EDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D+M K +   + E    + A++LL Q+    L+VVD+    +G++   D+ +F
Sbjct: 149 SDIMTKDHLITVPEGIERSDAIKLLHQYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|303243593|ref|ZP_07329935.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302486154|gb|EFL49076.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 278

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-S 284
             +    +K    L + I +  EK  G V VVD+  KL   ITE DI R    +++    
Sbjct: 88  MTNEAVCIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDIIRFLKDNVDKSEK 147

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M + P V      L    + + ++    L V+ +  + +G++   D ++ 
Sbjct: 148 VIDYMTEKPVVATSGERLKDVARTMLRNGFRRLPVISED-RLVGMITSTDFIKL 200



 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     + DA+  ++      + VVD G  ++ GIIT  DI                   
Sbjct: 15  VYPTTTIRDALITMNNSGTRRITVVDAGTNRVVGIITSMDIVDFMGGGSKYNLVKSKHNH 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+++M      I E+ LL   ++L  + N+  + VVD   K I  +   D+
Sbjct: 75  NLLAAINEPVKEIMTNEAVCIKENALLKEVIELFIEKNVGGVPVVDKDYKLISTITERDI 134

Query: 336 LRF 338
           +RF
Sbjct: 135 IRF 137



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 52/127 (40%), Gaps = 15/127 (11%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
             + +  +   +   G  L D    +    F  + V+ E  +L G+IT  D  +    D 
Sbjct: 147 KVIDYMTEKPVVATSGERLKDVARTMLRNGFRRLPVISED-RLVGMITSTDFIKLLGSDW 205

Query: 280 ------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                       +  + ++D+M+K+   + +D  L  A+  +  ++I  L VV +  K I
Sbjct: 206 AFNHMKTGNVREITNVRIKDIMVKDVLTVNKDASLYDAVDTMTTNDIGALPVV-EDGKVI 264

Query: 328 GIVHFLD 334
           GI+   D
Sbjct: 265 GIITEKD 271



 Score = 43.3 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 24/69 (34%), Gaps = 1/69 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     +  V     L DA+  ++    G + VV E  K
Sbjct: 204 DWAFNHMKTGNVREITNVRIKDIMVKDVLTVNKDASLYDAVDTMTTNDIGALPVV-EDGK 262

Query: 263 LKGIITEGD 271
           + GIITE D
Sbjct: 263 VIGIITEKD 271


>gi|77411390|ref|ZP_00787737.1| AcuB family protein [Streptococcus agalactiae CJB111]
 gi|77162563|gb|EAO73527.1| AcuB family protein [Streptococcus agalactiae CJB111]
          Length = 219

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLVGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GIV   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIVTDRDVFKA 129



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LVGLVT 48



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GI+T+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAF 130


>gi|148980238|ref|ZP_01815946.1| inositol-5-monophosphate dehydrogenase [Vibrionales bacterium
           SWAT-3]
 gi|145961332|gb|EDK26641.1| inositol-5-monophosphate dehydrogenase [Vibrionales bacterium
           SWAT-3]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEMVRQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVSPDATIADVVALTEKHGFAGFPVVTETNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKSRLASVKEGATREEVQEKMHEARVEKVLVVNDDFQLTGMITAKDFHKA 204


>gi|30248539|ref|NP_840609.1| CBS domain-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30138425|emb|CAD84435.1| CBS domain [Nitrosomonas europaea ATCC 19718]
          Length = 127

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 55/116 (47%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
                  +     +  A+ ++ E     + V+D G KL G++++ D+   +H   NT   
Sbjct: 8   MTPMPKTIGFDISVEKALVMMKECACHHLPVLD-GGKLVGVLSDRDLSMAWHGSGNTKDE 66

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D+M   P VI     + +A++++  + I+ L+V  +  +  GI+   DLLR+
Sbjct: 67  HLVRDLMTDTPVVIDPSAEINMAIRIMLDNKINSLIVRAEENQPWGILTSTDLLRY 122



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V D+M   PK I  D  +  A+ ++++     L V+D   K +G++   DL
Sbjct: 2   TKVRDLMTPMPKTIGFDISVEKALVMMKECACHHLPVLD-GGKLVGVLSDRDL 53


>gi|291614959|ref|YP_003525116.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Sideroxydans lithotrophicus ES-1]
 gi|291585071|gb|ADE12729.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Sideroxydans lithotrophicus
           ES-1]
          Length = 633

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--S 284
                       +  A+  + E R G +  VD   +  GI+T  D+          L   
Sbjct: 170 RREPVTCSPDTSIRQALEAMREHRIGSMIAVDADGRPLGIMTLHDVRDRIAIPQIDLDQP 229

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V  VM     V+    L   A  ++ +     ++VV++  + +G+V   DL
Sbjct: 230 VSGVMSSQLSVLPPQALAHEAALVMARQGFRHVLVVENE-RLVGLVSEKDL 279


>gi|320173847|gb|EFW49027.1| Sialic acid utilization regulator, RpiR family [Shigella
           dysenteriae CDC 74-1112]
          Length = 285

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLD--NVSGETEWRSSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|309792492|ref|ZP_07686956.1| putative signal transduction protein with CBS domains
           [Oscillochloris trichoides DG6]
 gi|308225480|gb|EFO79244.1| putative signal transduction protein with CBS domains
           [Oscillochloris trichoides DG6]
          Length = 133

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 59/130 (45%), Gaps = 10/130 (7%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    S+VMH G          P+ D    ++E+    + VVDE   + G+I+  D+   
Sbjct: 1   MERTVSEVMHRGVLTC--SRETPVQDVARQMTEQDISALVVVDEVGNMIGLISRTDLVNA 58

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAI 327
                + K+   L+   +M+ +   +  +  L  A + + + +I  ++V++D     + I
Sbjct: 59  RLYEQYWKNWRGLTAGHIMVTDVVSVRPEDSLQYASRRMMERHIHRVVVIEDADGGVRPI 118

Query: 328 GIVHFLDLLR 337
           G++   DL+R
Sbjct: 119 GVLSITDLVR 128



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +V +VM +       +T +    + + + +IS L+VVD+    IG++   DL+   +
Sbjct: 2   ERTVSEVMHRGVLTCSRETPVQDVARQMTEQDISALVVVDEVGNMIGLISRTDLVNARL 60


>gi|262163734|ref|ZP_06031474.1| transcriptional regulator RpiR family [Vibrio mimicus VM223]
 gi|262027714|gb|EEY46379.1| transcriptional regulator RpiR family [Vibrio mimicus VM223]
          Length = 282

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+ +   +F  A+  I+    RV I GIG S   G  LA  
Sbjct: 98  IAQKLVQTKTDAMLHTTNALRFD---EFSEAINWIQQAA-RVQIIGIGGSALTGKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + I L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADESQHRSSAIASRTAQNVLTDLIFITLAQQRETSARQ 269


>gi|257076324|ref|ZP_05570685.1| inosine 5'-monophosphate dehydrogenase [Ferroplasma acidarmanus
           fer1]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 174 APTTSAIMQLAIGDALAIALLE--SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
            P  S+ M     +++AIA+    +      +         +  +    S ++    S  
Sbjct: 46  IPIVSSPMDTVTEESMAIAMARYGAIGVIHRNMSANEQVEMVKKVKKEESIIIRDVFS-- 103

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            +    P+  A T++  K    + VV    KL GI+T     R+     +  +V+D+M K
Sbjct: 104 -IASDTPVNVARTLMKTKNIAGLPVV-ASGKLIGILT----KRDLEFSESEGTVKDIMTK 157

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +     E+  +  A  +L ++ +  L +VD   + +G++   D+
Sbjct: 158 DVITADENVSIEDAKFILYKNRVEKLPLVDSKGRLVGLITAKDI 201


>gi|319745547|gb|EFV97849.1| CBS domain protein [Streptococcus agalactiae ATCC 13813]
          Length = 219

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLVGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GI+   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIITDRDVFKA 129



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LVGLVT 48



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GIIT+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIITDRDVFKAF 130


>gi|299067485|emb|CBJ38684.1| inosine-5'-monophosphate dehydrogenase oxidoreductase [Ralstonia
           solanacearum CMR15]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGNKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A +L+ +H +  ++VVD   +  G++   D+ + 
Sbjct: 152 TPGEKLVTVREGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKA 202


>gi|220909579|ref|YP_002484890.1| chloride channel core [Cyanothece sp. PCC 7425]
 gi|219866190|gb|ACL46529.1| Chloride channel core [Cyanothece sp. PCC 7425]
          Length = 863

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
             PL +A+   S        V++E  KL GI+T+ D+     + L     ++ +M   P 
Sbjct: 460 DMPLEEAVQAFSRSHHRGFPVLEED-KLVGIVTQTDLNTIKQRPLPPNTPLQQIMTPWPI 518

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I     L   + LL ++N+S L VV + +K IGI+   D++R 
Sbjct: 519 TIPPQESLANVLYLLNRYNLSRLPVV-EGRKLIGIITRSDIIRA 561



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  ++   VM +  + +  D  L  A+Q   + +     V+++  K +GIV   DL
Sbjct: 441 LADMTAAQVMQRQVETLRSDMPLEEAVQAFSRSHHRGFPVLEED-KLVGIVTQTDL 495


>gi|167586119|ref|ZP_02378507.1| transcriptional regulator, RpiR family protein [Burkholderia
           ubonensis Bu]
          Length = 282

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT ++ S +A  
Sbjct: 158 YSDPHTFSMSSALLGPQDVVVAISNTGRTRDIVEAARAALACGAKVVAIT-QSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|146312640|ref|YP_001177714.1| inosine 5'-monophosphate dehydrogenase [Enterobacter sp. 638]
 gi|145319516|gb|ABP61663.1| inosine-5'-monophosphate dehydrogenase [Enterobacter sp. 638]
          Length = 488

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGIV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DL +  V   M 
Sbjct: 98  QSVLPTTTLAEVKALTERNGFAGYPVVTEDYELVGIITGRDVR--FVTDL-SQPVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVDD     G++   D  + 
Sbjct: 155 PKERLVTVREGETRDVVLAKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 204


>gi|78048042|ref|YP_364217.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78036472|emb|CAJ24163.1| Inosine-5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 485

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNDSFELRGLITVKDIQKK 203


>gi|330812206|ref|YP_004356668.1| hypothetical protein PSEBR_a5190 [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327380314|gb|AEA71664.1| Conserved hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
          Length = 504

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 54/129 (41%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
              LGT +   + +       P+      PL +A+ ++ +++ G + VV+E +   GI T
Sbjct: 168 AQTLGTQYSLNTRLGELAMRHPVSCSPDTPLREAVKLMHDQQVGSIVVVNEQKAPVGIFT 227

Query: 269 EGDIFRNFHKDLNTLSVEDV--MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
             D+ +         S   V  M + P  +  D     A   + + +I+ + +V   Q+ 
Sbjct: 228 LRDLRQVVADGSGDFSQAIVGHMTQAPFFLSPDHSAFDAAIAMTERHIAHVCLV-KDQRL 286

Query: 327 IGIVHFLDL 335
            G+V   DL
Sbjct: 287 CGVVSERDL 295



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                 G+     + V H   +   +       DA   ++E+    V +V + Q+L G++
Sbjct: 232 RQVVADGSGDFSQAIVGHMTQAPFFLSPDHSAFDAAIAMTERHIAHVCLV-KDQRLCGVV 290

Query: 268 TEGDI 272
           +E D+
Sbjct: 291 SERDL 295


>gi|293396096|ref|ZP_06640377.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291421594|gb|EFE94842.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 285

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 78/191 (40%), Gaps = 6/191 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            ++++ +  +        +S+ Q   +      + +    S L       F+ A + +  
Sbjct: 76  VFYNYSEVASLHAEIEPSDSSEQLLSKVFRTSIQAIEETLSILD---VSAFNRAADILYK 132

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +  + +  +G S  +   L+  L   G  +     A        +++ DD +IV+S SG
Sbjct: 133 AR-HIDLYAVGGSAAVARDLSHKLLKIGIKTTAYDDAHMMLMSAAILSDDDAVIVISHSG 191

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   +  A +    +IAIT+  +S VA  A +VL    +        A   S I Q
Sbjct: 192 ATRTVNDPIKLAAKNGAKVIAITNYAESPVALDAHVVLNSTSQGSHLLGENA--ASRIAQ 249

Query: 183 LAIGDALAIAL 193
           L I DAL +A+
Sbjct: 250 LNILDALFVAI 260


>gi|260769995|ref|ZP_05878928.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|260615333|gb|EEX40519.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|315182519|gb|ADT89432.1| cyclic nucleotide binding protein/2 CBS domain protein [Vibrio
           furnissii NCTC 11218]
          Length = 623

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILS--EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT- 282
           + ++I +V     + +   I+   E+R    AV+  G  + GI+T+ D+ R+        
Sbjct: 162 ASENIAIVDENTAIQEVARIMCDDERRRSSCAVITRGGDIVGIVTDRDMTRSVVASGIDI 221

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              ++ VM +NP++I  D  +  A+ ++ Q+NI  L VV      +G++ 
Sbjct: 222 QQPIQRVMTQNPQLIQADDKVIQAISIMLQYNIRCLPVV-RGNDVVGLLT 270



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 28/66 (42%), Gaps = 2/66 (3%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVH 331
           R   K L    V ++  +N  ++ E+T +    +++   +   S   V+      +GIV 
Sbjct: 147 REEEKGLFFRRVGEIASENIAIVDENTAIQEVARIMCDDERRRSSCAVITRGGDIVGIVT 206

Query: 332 FLDLLR 337
             D+ R
Sbjct: 207 DRDMTR 212


>gi|254448880|ref|ZP_05062336.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           HTCC5015]
 gi|198261570|gb|EDY85859.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           HTCC5015]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/171 (23%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       LAIAL            ++H    +         V         
Sbjct: 40  NVPILSSAMDTVTEGRLAIALACEGGIG-----IIHKSMSIEQQAAEVRKVKKYEAGVIT 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + D   I  E     + VVD G +L GI+T  D+   F  +L+   V  V
Sbjct: 95  DPLTVSPTMSVRDVNRITREHSISGLPVVD-GDRLVGIVTHRDLR--FETNLDQ-PVSAV 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E        +LL Q+ I  L+VV+D  +  G+V   D+ +
Sbjct: 151 MTSEDRLVTVKEGASREEIQKLLHQNRIEKLLVVNDNFELRGMVTVKDIQK 201


>gi|17546148|ref|NP_519550.1| inositol-5-monophosphate dehydrogenase [Ralstonia solanacearum
           GMI1000]
 gi|17428444|emb|CAD15131.1| probable inosine-5'-monophosphate dehydrogenase oxidoreductase
           protein [Ralstonia solanacearum GMI1000]
          Length = 487

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGNKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A +L+ +H +  ++VVD   +  G++   D+ + 
Sbjct: 152 TPGEKLVTVREGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKA 202


>gi|134296000|ref|YP_001119735.1| inosine 5'-monophosphate dehydrogenase [Burkholderia vietnamiensis
           G4]
 gi|134139157|gb|ABO54900.1| inosine-5'-monophosphate dehydrogenase [Burkholderia vietnamiensis
           G4]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FESRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|315659082|ref|ZP_07911948.1| 6-phospho 3-hexuloisomerase [Staphylococcus lugdunensis M23590]
 gi|315495893|gb|EFU84222.1| 6-phospho 3-hexuloisomerase [Staphylococcus lugdunensis M23590]
          Length = 189

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 70/174 (40%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE +L      Q+      +   +  +   G G+SG I +  A  L   G  ++ V 
Sbjct: 18  LEELERTLSHVQDEQYDRFANDVNGAQS-IFTAGKGRSGFIANTFAMRLNQLGKDAYVVG 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL ++LS SGS+  L+ +   A+     ++ +T+   S +   A+
Sbjct: 77  ESTTP-----SIKEHDLFVILSGSGSTAHLRLLAEKAQTVGAKVVLLTTNPDSPIGELAE 131

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q A    D++ + L+++ N  E      H
Sbjct: 132 TVIELPAGTKYNAEGSEQPLGSLFEQAALLFLDSVVLGLMDTFNIDEETMQNNH 185


>gi|227819350|ref|YP_002823321.1| Inosine-5'-monophosphate dehydrogenase related protein
           [Sinorhizobium fredii NGR234]
 gi|227338349|gb|ACP22568.1| Inosine-5'-monophosphate dehydrogenase related protein
           [Sinorhizobium fredii NGR234]
          Length = 145

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + LV     + D    ++E   G + V D   +L G++T+ DI  R     L+   
Sbjct: 7   MTRDVHLVTPNDTIRDVARQMAENDIGFLPVEDHD-RLVGMVTDRDIVVRGVADGLDPQA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V DVM  + K   ED  +    + +    +  L VV+  ++ +GIV   D
Sbjct: 66  KVRDVMTTDVKYCFEDEDVDDVARNMGDIQVRRLPVVNRDKRLVGIVSLAD 116



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V ++M ++  ++  +  +    + + +++I  L V +D  + +G+V   D++  G+
Sbjct: 3   VSEIMTRDVHLVTPNDTIRDVARQMAENDIGFLPV-EDHDRLVGMVTDRDIVVRGV 57


>gi|162451740|ref|YP_001614107.1| hypothetical protein sce3467 [Sorangium cellulosum 'So ce 56']
 gi|161162322|emb|CAN93627.1| hypothetical protein sce3467 [Sorangium cellulosum 'So ce 56']
          Length = 138

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKN 292
           + G P+ID + + +        V+D G  + G ++E D+      K+   ++  DVM   
Sbjct: 21  EQGTPVIDMLQLFASHHLSGAPVIDGGHHIVGFVSETDLLGVLLRKEYAGMTAADVMSTP 80

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  + E       M LLR + I  L VV +  + +GI+   D+LR+
Sbjct: 81  PICVDEFMPTDEVMTLLRANRIHHLPVVRE-GRLVGIITPQDILRY 125



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             ++M +    + + T +   +QL   H++S   V+D     +G V   DLL  G++
Sbjct: 9   ARNLMTERVIALEQGTPVIDMLQLFASHHLSGAPVIDGGHHIVGFVSETDLL--GVL 63


>gi|170741756|ref|YP_001770411.1| CBS domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196030|gb|ACA17977.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
          Length = 241

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 59/149 (39%), Gaps = 30/149 (20%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A D+MH       V+   PL     I  EKR     VVDE   L GI++EGD+     
Sbjct: 1   MRARDIMHRDVFT--VRPETPLGALARIFVEKRISAAPVVDESGALVGIVSEGDLLHRAE 58

Query: 278 ------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                                   ++ +  +V DVM         DT L   +++L + +
Sbjct: 59  LATDRRRSSWLRFFASIETLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRH 118

Query: 314 ISVLMVVDDC----QKAIGIVHFLDLLRF 338
           I  + +V+      ++ +GIV   DL+R 
Sbjct: 119 IRRVPIVEARPGLPERLVGIVTRSDLVRA 147



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 26/85 (30%), Gaps = 4/85 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--- 260
           F  +             +        +       PL + + IL  +    V +V+     
Sbjct: 72  FASIETLAHEYREAHGRTVRDVMASPVVTATPDTPLPEIVEILERRHIRRVPIVEARPGL 131

Query: 261 -QKLKGIITEGDIFRNFHKDLNTLS 284
            ++L GI+T  D+ R     L    
Sbjct: 132 PERLVGIVTRSDLVRALATLLPAAP 156


>gi|171321381|ref|ZP_02910335.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           MEX-5]
 gi|172060939|ref|YP_001808591.1| inosine 5'-monophosphate dehydrogenase [Burkholderia ambifaria
           MC40-6]
 gi|171093339|gb|EDT38533.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           MEX-5]
 gi|171993456|gb|ACB64375.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           MC40-6]
          Length = 486

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FESRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|108803779|ref|YP_643716.1| CBS domain-containing protein [Rubrobacter xylanophilus DSM 9941]
 gi|108765022|gb|ABG03904.1| CBS domain containing membrane protein [Rubrobacter xylanophilus
           DSM 9941]
          Length = 232

 Score = 80.7 bits (198), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 50/138 (36%), Gaps = 12/138 (8%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P  +     +   D M     +  +     + +A  +    R   + VV EG +L G++
Sbjct: 4   RPEERWLLQMLRVRDSM--TREVVTITPEASVAEAWELCRRHRIRHLPVV-EGGRLVGLV 60

Query: 268 TEGDIFRNF--------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           ++ D+                    + D+M      I     +  A + + +  I  L V
Sbjct: 61  SDRDLRDASPPRSTGDEEHSFGWARMRDIMSTELITIHPLDTIEHAAREIYERRIGCLPV 120

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V +  + +GI+   D++R
Sbjct: 121 V-EDGRLVGIITSSDMMR 137



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 20/130 (15%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G     F  A         +  +     +  A   + E+R GC+ VV E  +L GIIT  
Sbjct: 75  GDEEHSFGWARMRDIMSTELITIHPLDTIEHAAREIYERRIGCLPVV-EDGRLVGIITSS 133

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVI------LEDTLLTVAMQLLRQHNIS-----VLMV 319
           D+ R   +            +    I          L  +A   +R   ++     V   
Sbjct: 134 DMMRTLVELFG-------AHERGTWIEVEVPDRPGMLAAIA-DTVRDRRVNIASVFVAPA 185

Query: 320 VDDCQKAIGI 329
           +    + IG+
Sbjct: 186 MRASNRLIGM 195


>gi|323485937|ref|ZP_08091271.1| transcriptional regulator [Clostridium symbiosum WAL-14163]
 gi|323400751|gb|EGA93115.1| transcriptional regulator [Clostridium symbiosum WAL-14163]
          Length = 301

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 7/191 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K     G   + ++  + + + +      L    S L  E    F  A++ +   + ++ 
Sbjct: 99  KHSQLTGDVELDDTFTELSQKVLNTNISALQETYSLLDRE---TFENAIDILDRAR-KIY 154

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
             G+G SG    K  +         + +  +         +  +D  +++S+SG++ +  
Sbjct: 155 FFGVGASGLAAMKAMNKFLRIEPKVYCLQDSHMQAMAAATLGPEDAAVMISYSGATKDTI 214

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +   AR+     I IT   KS +   +D+ L           G   T++ I QL + D 
Sbjct: 215 QVAEIARKAGASTICITRFVKSPLTSFSDVTLLCGANEGPLQGG--STSAEISQLFLID- 271

Query: 189 LAIALLESRNF 199
           L       R+F
Sbjct: 272 LVYTEYYRRHF 282


>gi|260424707|ref|ZP_05733025.2| putative CBS domain protein [Dialister invisus DSM 15470]
 gi|260402912|gb|EEW96459.1| putative CBS domain protein [Dialister invisus DSM 15470]
          Length = 176

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/157 (17%), Positives = 57/157 (36%), Gaps = 30/157 (19%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +    +  +    +      +     + + + +        V VV +  +L GI++E
Sbjct: 3   GGIIMGEKIIKAKDFMTKYVFS-IPPDVTVHELVKLFVTHPVSAVPVVGDDNELLGIVSE 61

Query: 270 GDIF----------------------------RNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           GD+                             R+F K L      D+M K+ + +  +T 
Sbjct: 62  GDLLYKKVKPKVPAYLDILGANIYYCGFGRYERSFRK-LLATQAADLMTKDVRCVTPETD 120

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   M L+   ++  + VV+   + +GI+   D+L  
Sbjct: 121 METIMNLMIDEHLKTVPVVEKPNRLVGIITRHDILGA 157



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 23/62 (37%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     +   + ++ ++    V VV++  +L GIIT  DI            +
Sbjct: 108 MTKDVRCVTPETDMETIMNLMIDEHLKTVPVVEKPNRLVGIITRHDILGAIAATELEEKM 167

Query: 286 ED 287
            +
Sbjct: 168 SE 169


>gi|147678859|ref|YP_001213074.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
 gi|146274956|dbj|BAF60705.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
          Length = 159

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 25/138 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
               +  +K    +ID + +   K+     VVD   +L GIIT GDI    +K       
Sbjct: 7   MTKDVYTIKDTDKVIDLLRLFERKKITGAPVVDNCNRLVGIITVGDILGRIYKPVPLFDI 66

Query: 279 ------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                             D+    V ++M +    + EDT      +++ +H    L VV
Sbjct: 67  MYYVAVLDTDAIVNGEIYDVLGKLVSELMTRKVITVSEDTEFADVAKIMSRHRFKKLPVV 126

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D   K IG++   +++R+
Sbjct: 127 DSSNKLIGVISRGEIVRY 144



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++V+D+M K+   I +   +   ++L  +  I+   VVD+C + +GI+   D+L
Sbjct: 1   MTVKDLMTKDVYTIKDTDKVIDLLRLFERKKITGAPVVDNCNRLVGIITVGDIL 54



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 23/51 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V       D   I+S  RF  + VVD   KL G+I+ G+I R F
Sbjct: 95  MTRKVITVSEDTEFADVAKIMSRHRFKKLPVVDSSNKLIGVISRGEIVRYF 145


>gi|120554724|ref|YP_959075.1| diguanylate cyclase with PAS/PAC sensor [Marinobacter aquaeolei
           VT8]
 gi|120324573|gb|ABM18888.1| diguanylate cyclase with PAS/PAC sensor [Marinobacter aquaeolei
           VT8]
          Length = 574

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +V+    L +  + +     G V VVD  ++  GI+TE D+ R   +  +   V ++  +
Sbjct: 147 VVRGDQSLAEVASYMHRHHAGAV-VVDCDEEGLGILTERDMVRFIARHTSNTLVNELATR 205

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               + E+  L  A  LL  H I  L VV+   +  G++ + D+L
Sbjct: 206 PLLTVNEEDPLIHARDLLIDHRIRHLAVVNQLGEVTGLIGYHDML 250



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S +MH+G  +   ++   + DA   +SE     + + D G  + GI TE D       D
Sbjct: 7   ISRIMHTGVLLQ-CELDTTIADAAARMSENSVSSILITD-GGTVVGIWTEHD---ALAID 61

Query: 280 LNT-----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     V  VM      +        A   LR       +V +   + +GI+   D
Sbjct: 62  FADPAKFRQPVSTVMSSPVLSLPATLDAGEAAVRLRDTGKRHFLVTNSSGEPVGILSQTD 121

Query: 335 L 335
           L
Sbjct: 122 L 122



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 43/101 (42%), Gaps = 5/101 (4%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVILE 298
           +A   L +       V +   +  GI+++ D+  N      L    V   + ++P V+  
Sbjct: 91  EAAVRLRDTGKRHFLVTNSSGEPVGILSQTDLALNQGLEPYLRLREVRAAVPRSPLVVRG 150

Query: 299 DTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDLLRF 338
           D  L      + +H+   ++V  D+    +GI+   D++RF
Sbjct: 151 DQSLAEVASYMHRHHAGAVVVDCDEEG--LGILTERDMVRF 189


>gi|325272356|ref|ZP_08138756.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
 gi|324102516|gb|EGB99962.1| CBS domain-containing protein [Pseudomonas sp. TJI-51]
          Length = 145

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 8/128 (6%)

Query: 217 FVCASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                 ++ +      V        ++DA+ +L+EK  G + VV EG+++ GI++E D  
Sbjct: 1   MKTVEQILKTKSQHQTVYTIGPDDSVLDALKMLAEKNIGALPVV-EGKQVVGIVSERDYA 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +      V ++M      +     L   M L+   ++  L VV    + +G++
Sbjct: 60  RKLVLKGRSSAATPVREIMSAPVVTVEPRQNLEYCMNLMTDRHLRHLPVV-SNGELLGLL 118

Query: 331 HFLDLLRF 338
              DL++ 
Sbjct: 119 SIGDLVKE 126


>gi|21226600|ref|NP_632522.1| putative chloride channel protein [Methanosarcina mazei Go1]
 gi|20904877|gb|AAM30194.1| putative chloride channel protein [Methanosarcina mazei Go1]
          Length = 589

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 33/198 (16%), Positives = 67/198 (33%), Gaps = 4/198 (2%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +I + +            +L L +        L    S ++   + +AL    + +    
Sbjct: 379 MIGMGAVFAGTARAPLTAILILFEMTRDYSLILPLMFSCVLSNVMSNALYPESIFTEGLR 438

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F +   G ++  +             +  V     +   I ++   R     V+D  
Sbjct: 439 RKGFKI-RKGREVDIMDSMLVKDAM-VTHVQTVSEEKNVGTLIALMQASRHAGFPVLDSK 496

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            KL GI+T  D+            + D+  +  +V   D  L   ++ L    I  L VV
Sbjct: 497 GKLSGIVTLSDLRSKVKYGEVDKKIGDIATRTVEVAYPDETLEAVLRRLGSKQIGRLPVV 556

Query: 321 DDCQ--KAIGIVHFLDLL 336
           D  +  K +G++   D++
Sbjct: 557 DHEEKTKLLGLITRSDVV 574


>gi|118476396|ref|YP_893547.1| CBS domain-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|196046714|ref|ZP_03113937.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|225862698|ref|YP_002748076.1| CBS domain protein [Bacillus cereus 03BB102]
 gi|118415621|gb|ABK84040.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
 gi|196022426|gb|EDX61110.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|225790017|gb|ACO30234.1| CBS domain protein [Bacillus cereus 03BB102]
          Length = 139

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIISVSPDDSIEKATELMAQHQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|56708824|ref|YP_164865.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56680509|gb|AAV97174.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
          Length = 174

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           V+ G  +   + +L +KR G V V D+   L GI++E DI R              E +M
Sbjct: 49  VRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVRRMADTPGQTLPQQAEGLM 108

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +    D  L V ++ + +     L V+    K  G++   D++
Sbjct: 109 TRAVQTCAPDETLNVVLKRMTEGRFRHLPVM-RDGKLCGMITIGDVV 154



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 19/43 (44%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     +   + +L+   I  ++V D     +GI+   D++R
Sbjct: 48  SVRPGDTIGQVVGVLKDKRIGAVLVTDQNGALLGILSERDIVR 90


>gi|7546367|pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
           From Streptococcus Pyogenes
          Length = 491

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  +A      G   AIA+  +         V+H    +         V  S + + +
Sbjct: 44  NIPIITAAXDTVTGSKXAIAIARAGGLG-----VIHKNXSITEQAEEVRKVKRSENGVII 98

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + +A  +    R   V +V+    +KL GIIT  D    F  D N    E
Sbjct: 99  DPFFLTPEHKVSEAEELXQRYRISGVPIVETLANRKLVGIITNRDXR--FISDYNAPISE 156

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               ++       T L  A ++L +H I  L +VD+  +  G++   D+
Sbjct: 157 HXTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGLITIKDI 205


>gi|292655427|ref|YP_003535324.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2]
 gi|291371697|gb|ADE03924.1| inosine-5-monophosphate dehydrogenase [Haloferax volcanii DS2]
          Length = 498

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE-------SRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  SA M       +AI +          RN +                   A  ++ 
Sbjct: 53  NIPILSAAMDTVTESGMAIGMAREGGLGVLHRNMNAEQMVRE------IERVKRADKLVI 106

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + +     G  + +   ++         VVD+   + GII+  DI        +   V
Sbjct: 107 RREDVVTANPGQTISEVDEMMERAGVSGAPVVDDDDVVLGIISGTDIRPYLEVGESD-EV 165

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + M         D     A++L+  H I  + +VDD  + +G+V    +L+
Sbjct: 166 GEAMTDEVITAERDVTARDALELMYDHKIERVPIVDDDSRLVGLVTMQGILQ 217


>gi|52144591|ref|YP_082236.1| CBS domain-containing protein [Bacillus cereus E33L]
 gi|51978060|gb|AAU19610.1| CBS domain protein [Bacillus cereus E33L]
          Length = 139

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIISVSPDDSIEKATELMAQHQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|158318670|ref|YP_001511178.1| signal-transduction protein [Frankia sp. EAN1pec]
 gi|158114075|gb|ABW16272.1| putative signal-transduction protein with CBS domains [Frankia sp.
           EAN1pec]
          Length = 242

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLS 284
                 V     + DA   +  +  G + VV++   L GI+T+ DI  R   + ++    
Sbjct: 9   TRQPVTVDKSTSIQDAAREMERQGVGALLVVEDDDNLVGIVTDRDIVLRGVARGVSPDSQ 68

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +E +       I     +  A ++ R H    L V+ + ++ +G++   DLL
Sbjct: 69  IEALTTTEVITIPAGIDVERAYRVFRDHAFRRLPVM-EGRRVVGLLSVDDLL 119



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + P  + + T +  A + + +  +  L+VV+D    +GIV   D++  G+
Sbjct: 9   TRQPVTVDKSTSIQDAAREMERQGVGALLVVEDDDNLVGIVTDRDIVLRGV 59


>gi|330469770|ref|YP_004407513.1| RpiR family transcriptional regulator [Verrucosispora maris
           AB-18-032]
 gi|328812741|gb|AEB46913.1| transcriptional regulator, rpir family protein [Verrucosispora
           maris AB-18-032]
          Length = 289

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 6/162 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      L   +  Q    VE I    GR+VI G+G SG +   L   L   G  +F
Sbjct: 106 ARAVEQTAEQLDPAVCEQ---VVEAIVGA-GRIVIFGVGASGFVALDLQQKLHRIGRAAF 161

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                  +     ++ R D+ + +S +G++ ++  +L  A   +   +A+T+  +S +A 
Sbjct: 162 CFPDVHTALTSAALLARGDVAVGVSHTGATSDVIEVLAQAGSRAATTVALTNFPRSPLAT 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD VLT      +   G     S I QL + D L + +   
Sbjct: 222 LADHVLTTAARETTYRSGA--MASRIAQLTVVDCLYVGVAAR 261


>gi|294633387|ref|ZP_06711946.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831168|gb|EFF89518.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 225

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              ++  V    P  D + ++ + +   + V++   ++ G+++E D+      R+   D 
Sbjct: 1   MTHTVVAVGRDAPFKDIVGLMGQWKVSALPVLEGEGRVIGVVSEADLLPKEEFRDSDPDR 60

Query: 281 NT-------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T             L+  ++M      +  D  L  A +++ Q  +  L VV+      
Sbjct: 61  FTQLRRLSDLAKAGALTAGELMSSPAVTVHPDAPLAEAARIMAQRRVKRLPVVNAEGLLE 120

Query: 328 GIVHFLDLLR 337
           G+V   DLL+
Sbjct: 121 GVVSRGDLLK 130



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/92 (20%), Positives = 43/92 (46%), Gaps = 2/92 (2%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+   + F  L     L       +  + S  ++  V    PL +A  I++++R   + V
Sbjct: 54  RDSDPDRFTQLRRLSDLAKAGALTAGELMSSPAVT-VHPDAPLAEAARIMAQRRVKRLPV 112

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V+    L+G+++ GD+ + F +  + +  ++V
Sbjct: 113 VNAEGLLEGVVSRGDLLKVFLRPDDEI-ADEV 143


>gi|293384063|ref|ZP_06629957.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|293386877|ref|ZP_06631447.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|312907986|ref|ZP_07766969.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|312978486|ref|ZP_07790224.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
 gi|291078543|gb|EFE15907.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|291083711|gb|EFE20674.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|310626077|gb|EFQ09360.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|311288635|gb|EFQ67191.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
          Length = 197

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + Q   + +    VE+IK     + + G G+SG      A+ L   G     V 
Sbjct: 22  LAELTQNAQRIDTNEIAHFVEQIKQA-NHIFLNGAGRSGIAIRAFANRLMHIGFSVSIVG 80

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A++  I L  +T + +S +   AD
Sbjct: 81  EISSPHS-----KPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLAD 135

Query: 158 IVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
           +VL LP   +            P  SA  QLA    D + + L++    +    +  H
Sbjct: 136 VVLVLPGTTKEENDRETASFAQPMGSAFEQLAFLTFDGMVLNLMDELGETSETMFKRH 193


>gi|149202699|ref|ZP_01879671.1| inosine-5'-monophosphate dehydrogenase [Roseovarius sp. TM1035]
 gi|149143981|gb|EDM32015.1| inosine-5'-monophosphate dehydrogenase [Roseovarius sp. TM1035]
          Length = 482

 Score = 80.3 bits (197), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI++ +S        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAISMAQSGGMGVIHRNLTIEEQAREVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +          VVDE  ++ GI+T  D+   F +D +   V  +M 
Sbjct: 99  ---SPDQTLADAKALQDRYNVTGFPVVDETGRVVGIVTNRDMR--FAED-DRTPVRVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            N   IL++      A  L++   I  L+V D   K  G++   D
Sbjct: 153 SNDLAILQEPADRDEAKSLMKARRIEKLLVTDKAGKLTGLLTLRD 197



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++N++   VVD+  + +GIV   D+
Sbjct: 94  NPITLSPDQTLADAKALQDRYNVTGFPVVDETGRVVGIVTNRDM 137


>gi|238027425|ref|YP_002911656.1| hypothetical protein bglu_1g18280 [Burkholderia glumae BGR1]
 gi|237876619|gb|ACR28952.1| Hypothetical protein bglu_1g18280 [Burkholderia glumae BGR1]
          Length = 142

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 42/105 (40%), Gaps = 3/105 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           +     +  A   ++    G + V D   +L GI+T+ D+  R    D+    ++ +V  
Sbjct: 15  IAPNDSVRHAAQCMAHYDVGALPVCDR-GRLVGIVTDRDLAVRVLADDVGPDTAIGEVAT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + P    E   L    Q + +  I    VV    + +G++   D+
Sbjct: 74  RRPVCCREHDDLDAVQQRMAEARIRRTPVVTASGQLVGMLSLGDI 118



 Score = 49.5 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V DVM ++   I  +  +  A Q +  +++  L V D   + +GIV   DL
Sbjct: 4   VADVMSRDVVSIAPNDSVRHAAQCMAHYDVGALPVCD-RGRLVGIVTDRDL 53


>gi|149182108|ref|ZP_01860592.1| transcriptional regulator (RpiR family) protein [Bacillus sp. SG-1]
 gi|148850210|gb|EDL64376.1| transcriptional regulator (RpiR family) protein [Bacillus sp. SG-1]
          Length = 284

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 68/169 (40%), Gaps = 3/169 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  + ++E +L      QF    + +      +   G G SG +          TG    
Sbjct: 105 RSNMKTIEDTLMVLKEKQFQETADAMLTADN-IEFFGSGGSGIVAMDAYHKFIRTGLRVH 163

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +         +T+ D  +++S SGS+ ++  ++   +      IAIT+  KS ++ 
Sbjct: 164 ASTDSHIQLMTASQMTKKDCAVLISHSGSTKDILQVMKVLKESGAKTIAITNFAKSPLSE 223

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            ADI L    E           +S I QL+I DAL ++++  R+    D
Sbjct: 224 KADISLYTVSEETDYRSEAL--SSRIAQLSIFDALYVSIMLKRDQDGQD 270


>gi|115352075|ref|YP_773914.1| inosine 5'-monophosphate dehydrogenase [Burkholderia ambifaria
           AMMD]
 gi|170703926|ref|ZP_02894599.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           IOP40-10]
 gi|115282063|gb|ABI87580.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           AMMD]
 gi|170131166|gb|EDS99820.1| inosine-5'-monophosphate dehydrogenase [Burkholderia ambifaria
           IOP40-10]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FESRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|167999412|ref|XP_001752411.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162696311|gb|EDQ82650.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 208

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNF---HKDLNTLSVE 286
              +   + DA+  ++    G + VV  G  + L GIITE D  R      +   T  V 
Sbjct: 76  WCSVDDTVYDAVKSMTANNVGALLVVKSGTEKTLAGIITERDYLRKIIVQGRSSKTTKVG 135

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AM+L+  + I  + VV+      G+V   D++R 
Sbjct: 136 DIMTEENKLITVSPDTKVLRAMELMTNNRIRHIPVVEGKGM-KGMVSIGDVVRA 188



 Score = 42.6 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +  V     ++ A+ +++  R   + VV 
Sbjct: 113 ITERDYLRKIIVQGRSSKTTKVGDIMTEENKLITVSPDTKVLRAMELMTNNRIRHIPVV- 171

Query: 259 EGQKLKGIITEGDIFRNF 276
           EG+ +KG+++ GD+ R  
Sbjct: 172 EGKGMKGMVSIGDVVRAV 189


>gi|144900475|emb|CAM77339.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 143

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           ++    + DA  ++S K+ G   V D    + G+++E DI      F K +  + V ++M
Sbjct: 17  IRPEHSVADAAALMSAKKVGVAVVCDAKGTVVGVVSERDIVSGITQFGKGVVDMPVRNIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                       +   M+++ +  I  L VVD     +G+V   D
Sbjct: 77  TSPVLTCGPGDSVKRIMEIMTERRIRHLPVVD-GGDLLGMVSIGD 120



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 19/45 (42%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N   I  +  +  A  L+    + V +V D     +G+V   D++
Sbjct: 13  NVFTIRPEHSVADAAALMSAKKVGVAVVCDAKGTVVGVVSERDIV 57


>gi|20806737|ref|NP_621908.1| transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
 gi|254478117|ref|ZP_05091500.1| transcriptional regulator, RpiR family protein [Carboxydibrachium
           pacificum DSM 12653]
 gi|32363350|sp|Q8RD36|Y211_THETN RecName: Full=Uncharacterized HTH-type transcriptional regulator
           TTE0211
 gi|20515194|gb|AAM23512.1| Transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
 gi|214035979|gb|EEB76670.1| transcriptional regulator, RpiR family protein [Carboxydibrachium
           pacificum DSM 12653]
          Length = 282

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +++S++    + +   A E +     ++   G+  SG +        +    P      
Sbjct: 105 QAIDSTIAVLNAEELTKAAEALANA-NKIDFYGVAASGVVAYDAMLKFSRINIPCTAYQD 163

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                     + + D+   +S+SG++ E+   +  A+      I++T   +S +A  ADI
Sbjct: 164 THLQLTSAVNLKKGDVAFGISYSGATKEIVEAIQTAKEAGATTISLTKYGQSPLAKAADI 223

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            L +  E      G     S I QL + D L I + + +
Sbjct: 224 NLFVSSEEAMFRAGA--MASRIAQLTVIDILFILVAQKK 260


>gi|328950112|ref|YP_004367447.1| diguanylate cyclase [Marinithermus hydrothermalis DSM 14884]
 gi|328450436|gb|AEB11337.1| diguanylate cyclase [Marinithermus hydrothermalis DSM 14884]
          Length = 291

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +++    + +A  ++ E+  G + VV EG++L GI+T  D  R     L    V
Sbjct: 11  MTPDPIVIEAHRSVSEAAALMEEQGIGGLPVV-EGERLVGILTSRDTRRAHPNRL----V 65

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D M  NP  I  +  +  A   ++   +  ++VV+   + +GI+    L+  
Sbjct: 66  VDAMSANPITITPEESILTAYTRMQAAGVERIVVVEAA-RPVGILTIKTLMHA 117



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D+M  +P VI     ++ A  L+ +  I  L VV + ++ +GI+   D  R 
Sbjct: 5   QRVADLMTPDPIVIEAHRSVSEAAALMEEQGIGGLPVV-EGERLVGILTSRDTRRA 59


>gi|229183053|ref|ZP_04310283.1| CBS domain protein [Bacillus cereus BGSC 6E1]
 gi|228600192|gb|EEK57782.1| CBS domain protein [Bacillus cereus BGSC 6E1]
          Length = 139

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDSIEKATELMAQHQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|225374686|ref|ZP_03751907.1| hypothetical protein ROSEINA2194_00306 [Roseburia inulinivorans DSM
           16841]
 gi|225213476|gb|EEG95830.1| hypothetical protein ROSEINA2194_00306 [Roseburia inulinivorans DSM
           16841]
          Length = 484

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAAMDTVTEHRMAIAMARQGGIG-----IIHKNMSIQAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG KL GIIT  D+   F  D      E +
Sbjct: 96  DPFFLSPEHTLQDAEDLMRKFRISGVPIC-EGGKLVGIITNRDLK--FETDFTKKISESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLITAPEGITLDEAKKILAKARKEKLPIVDKDFHLKGLITIKDI 199


>gi|126737496|ref|ZP_01753226.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. SK209-2-6]
 gi|126720889|gb|EBA17593.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseobacter sp. SK209-2-6]
          Length = 607

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 58/171 (33%), Gaps = 12/171 (7%)

Query: 178 SAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           +     A  D L + L +   FS           F    P     +              
Sbjct: 92  AVTSARATEDCLLLLLPKEGFFSLMAAQRSVARFFDRRRPEPAQYSGLTTTRAADFMAKD 151

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVED 287
                 G     A  ++ +    C+ V ++   L+GI+T  D+      +    +  V  
Sbjct: 152 PVTCSTGLTCQSAAQLMRQHHISCLCVTEDAG-LQGILTTRDLTEKLLAEGLPFSTPVSK 210

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM + P  +    L +  +  + +H+I  + +    ++ +GIV   DL RF
Sbjct: 211 VMTQAPITLPPSALGSDVLHAMMEHHIGHVPIT-QGKEIVGIVTQTDLTRF 260


>gi|238756442|ref|ZP_04617750.1| Mannose-1-phosphate guanyltransferase [Yersinia ruckeri ATCC 29473]
 gi|238705331|gb|EEP97740.1| Mannose-1-phosphate guanyltransferase [Yersinia ruckeri ATCC 29473]
          Length = 351

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VED 287
              L+     +  A+ +++ +      VVD+ Q L G+IT+GDI R     L+  +    
Sbjct: 6   QNVLIGPDSSIRKALEVINHEALKIALVVDKEQHLLGVITDGDIRRGLLNSLDLQAYASQ 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM  +P V   +       +++    I+ + VV    K +G+    
Sbjct: 66  VMNTSPVVAGGEMSTQELNRVMTAAGITAVPVV-KDGKVVGLKTLQ 110



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I  D+ +  A++++    + + +VVD  Q  +G++   D+ R G++
Sbjct: 10  IGPDSSIRKALEVINHEALKIALVVDKEQHLLGVITDGDI-RRGLL 54


>gi|238026460|ref|YP_002910691.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia glumae BGR1]
 gi|237875654|gb|ACR27987.1| Glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia glumae BGR1]
          Length = 638

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 418 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVAQAIEILNGAR-RIEFY 473

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 474 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 533

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 534 LEVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 590

Query: 191 IALLESR 197
           + +   R
Sbjct: 591 VGVAIRR 597


>gi|120609635|ref|YP_969313.1| RpiR family transcriptional regulator [Acidovorax citrulli AAC00-1]
 gi|120588099|gb|ABM31539.1| transcriptional regulator, RpiR family [Acidovorax citrulli
           AAC00-1]
          Length = 281

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G SG +           G  S              ++   D ++++S SG + 
Sbjct: 132 RIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDCVVIVSNSGRTR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +L      ARR     IAIT+   S +A    I L          +  +P  S ++ L I
Sbjct: 192 DLMDATDIARRNGATTIAITASG-SPLASACHIHLAADHPEGYDRY--SPMVSRLLHLLI 248

Query: 186 GDALAIALLESRN 198
            D LA  +     
Sbjct: 249 IDVLATCVALRIG 261


>gi|254226341|ref|ZP_04919931.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125621146|gb|EAZ49490.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 282

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|124266813|ref|YP_001020817.1| inosine-5'-monophosphate dehydrogenase [Methylibium petroleiphilum
           PM1]
 gi|124259588|gb|ABM94582.1| inosine-5'-monophosphate dehydrogenase [Methylibium petroleiphilum
           PM1]
          Length = 489

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 59/167 (35%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +           L P  +   +                
Sbjct: 40  NLPLASAAMDTVTEARLAIALAQEGGIGIVH-KNLSPKQQAAEVSRVKRYESGLLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  + D I +  +       VVD+  K+ GI+T  D+   F   L    V ++M   
Sbjct: 99  ISSGVRVQDVINLSRQHGISGFPVVDD-GKVVGIVTGRDLR--FETRL-DAPVREIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E   L  A  L+ +H +  ++VV+   +  G+    D+ +
Sbjct: 155 ERLVSVNEGATLEEAKSLMHRHKLERVVVVNAANELRGLFTVKDITK 201


>gi|23013062|ref|ZP_00053012.1| COG2905: Predicted signal-transduction protein containing
           cAMP-binding and CBS domains [Magnetospirillum
           magnetotacticum MS-1]
          Length = 479

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---NTLSVEDVMIKNPK 294
            L DA+  + E R   +  VD   +  GI TE D+ R    +       +++  M K   
Sbjct: 35  TLHDAVHRMYESRVSSIVGVDAEGRTLGIFTERDLLRILSTNGPAGLEQTLDQTMTKPVA 94

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  D  + VA+  + +  +  L+VVDD ++ +G++    LL+
Sbjct: 95  TVPADAYVYVALARMTRLGLRHLVVVDDDKRPLGMITGRALLK 137



 Score = 42.6 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 23/53 (43%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM       L    L  A+  + +  +S ++ VD   + +GI    DLLR 
Sbjct: 20  REVMSAPVLTALASVTLHDAVHRMYESRVSSIVGVDAEGRTLGIFTERDLLRI 72



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 36/108 (33%), Gaps = 15/108 (13%)

Query: 199 FSENDF-YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E D   +L   G  G        +     +   V     +  A+  ++      + VV
Sbjct: 64  FTERDLLRILSTNGPAGLEQTLDQTMTKPVAT---VPADAYVYVALARMTRLGLRHLVVV 120

Query: 258 DEGQKLKGIITEGDIF--RNFHKDLNTLSVED---------VMIKNPK 294
           D+ ++  G+IT   +   R     +   S E          VM   PK
Sbjct: 121 DDDKRPLGMITGRALLKVRATEALVLGDSAESAGNPEEMKAVMTSLPK 168


>gi|330817415|ref|YP_004361120.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia gladioli BSR3]
 gi|327369808|gb|AEA61164.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia gladioli BSR3]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPSMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FESRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDTFELRGLMTVKDITK 201


>gi|160901107|ref|YP_001566689.1| RpiR family transcriptional regulator [Delftia acidovorans SPH-1]
 gi|160366691|gb|ABX38304.1| transcriptional regulator, RpiR family [Delftia acidovorans SPH-1]
          Length = 323

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 46/133 (34%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G SG +           G  S              ++   D  +++S SG + 
Sbjct: 174 RIEFYGAGNSGIVAQDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDCAVIISNSGRTR 233

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +L      AR+     IAIT+   S +A    I L          +  +P  S ++ L +
Sbjct: 234 DLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDRY--SPMVSRLLHLLV 290

Query: 186 GDALAIALLESRN 198
            D LA  +     
Sbjct: 291 IDVLATCVALRIG 303


>gi|77408331|ref|ZP_00785073.1| AcuB family protein [Streptococcus agalactiae COH1]
 gi|77173094|gb|EAO76221.1| AcuB family protein [Streptococcus agalactiae COH1]
          Length = 219

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLVGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GIV   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIVTDRDVFKA 129



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LVGLVT 48



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GI+T+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAF 130


>gi|53719740|ref|YP_108726.1| inosine 5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           K96243]
 gi|53723710|ref|YP_103165.1| inosine 5'-monophosphate dehydrogenase [Burkholderia mallei ATCC
           23344]
 gi|67641681|ref|ZP_00440450.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei GB8
           horse 4]
 gi|76811886|ref|YP_333941.1| inosine 5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1710b]
 gi|121600514|ref|YP_993340.1| inosine 5'-monophosphate dehydrogenase [Burkholderia mallei SAVP1]
 gi|124386494|ref|YP_001029223.1| inosine 5'-monophosphate dehydrogenase [Burkholderia mallei NCTC
           10229]
 gi|126438379|ref|YP_001059437.1| inosine 5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           668]
 gi|126448394|ref|YP_001080846.1| inosine 5'-monophosphate dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|126453878|ref|YP_001066717.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|134277101|ref|ZP_01763816.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           305]
 gi|167000585|ref|ZP_02266396.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei PRL-20]
 gi|167720128|ref|ZP_02403364.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           DM98]
 gi|167744452|ref|ZP_02417226.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           14]
 gi|167816344|ref|ZP_02448024.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           91]
 gi|167830206|ref|ZP_02461677.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           9]
 gi|167851642|ref|ZP_02477150.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           B7210]
 gi|167900168|ref|ZP_02487569.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           7894]
 gi|167908530|ref|ZP_02495735.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           NCTC 13177]
 gi|167919480|ref|ZP_02506571.1| inositol-5-monophosphate dehydrogenase [Burkholderia pseudomallei
           BCC215]
 gi|217421552|ref|ZP_03453056.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           576]
 gi|226200155|ref|ZP_03795701.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237812774|ref|YP_002897225.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           MSHR346]
 gi|242318027|ref|ZP_04817043.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|254178176|ref|ZP_04884831.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei ATCC
           10399]
 gi|254179353|ref|ZP_04885952.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|254189259|ref|ZP_04895770.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254198385|ref|ZP_04904807.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|254200117|ref|ZP_04906483.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei FMH]
 gi|254206454|ref|ZP_04912806.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei JHU]
 gi|254260952|ref|ZP_04952006.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1710a]
 gi|254297237|ref|ZP_04964690.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|254358136|ref|ZP_04974409.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei
           2002721280]
 gi|52210154|emb|CAH36132.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           K96243]
 gi|52427133|gb|AAU47726.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei ATCC
           23344]
 gi|76581339|gb|ABA50814.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1710b]
 gi|121229324|gb|ABM51842.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei SAVP1]
 gi|124294514|gb|ABN03783.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei NCTC
           10229]
 gi|126217872|gb|ABN81378.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           668]
 gi|126227520|gb|ABN91060.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1106a]
 gi|126241264|gb|ABO04357.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei NCTC
           10247]
 gi|134250751|gb|EBA50830.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           305]
 gi|147749713|gb|EDK56787.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei FMH]
 gi|147753897|gb|EDK60962.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei JHU]
 gi|148027263|gb|EDK85284.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei
           2002721280]
 gi|157806945|gb|EDO84115.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           406e]
 gi|157936938|gb|EDO92608.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160699215|gb|EDP89185.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei ATCC
           10399]
 gi|169655126|gb|EDS87819.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           S13]
 gi|184209893|gb|EDU06936.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1655]
 gi|217395294|gb|EEC35312.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           576]
 gi|225927839|gb|EEH23880.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           Pakistan 9]
 gi|237503556|gb|ACQ95874.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           MSHR346]
 gi|238522639|gb|EEP86082.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei GB8
           horse 4]
 gi|242141266|gb|EES27668.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1106b]
 gi|243063512|gb|EES45698.1| inosine-5'-monophosphate dehydrogenase [Burkholderia mallei PRL-20]
 gi|254219641|gb|EET09025.1| inosine-5'-monophosphate dehydrogenase [Burkholderia pseudomallei
           1710a]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPVEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG KL GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPSMKVRDVIALSRQHGISGFPVV-EGPKLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVAEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|327310019|ref|YP_004336916.1| putative signal-transduction protein [Thermoproteus uzoniensis
           768-20]
 gi|326946498|gb|AEA11604.1| putative signal-transduction protein [Thermoproteus uzoniensis
           768-20]
          Length = 142

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKDLN-T 282
           +      V     L +    L+E++ G V VVDE   Q   G+I+E DI R     ++  
Sbjct: 7   ARKPPITVSTKTTLKEVAKTLAERKIGIVVVVDEKAPQNPLGVISERDIVRAIATGVDLN 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              E  M      +     L    +++R HNI   +VV    K  G++   DL+
Sbjct: 67  TPAEKYMTSPVITVEASEPLWKVAEVMRTHNIRH-VVVTKGGKLYGVISIRDLI 119



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLLRF 338
            E +  K P  +   T L    + L +  I +++VVD+   Q  +G++   D++R 
Sbjct: 3   AETLARKPPITVSTKTTLKEVAKTLAERKIGIVVVVDEKAPQNPLGVISERDIVRA 58


>gi|78066770|ref|YP_369539.1| inositol-5-monophosphate dehydrogenase [Burkholderia sp. 383]
 gi|77967515|gb|ABB08895.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. 383]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|56479232|ref|YP_160821.1| inosine-5'-monophosphate dehydrogenase [Aromatoleum aromaticum
           EbN1]
 gi|56315275|emb|CAI09920.1| Inosine-5'-monophosphate dehydrogenase [Aromatoleum aromaticum
           EbN1]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +  V      +  +    S V+      
Sbjct: 40  NIPLVSAAMDTVTESRLAIALAQEGGIGILHKNLAVKQQAAMVAKVKRFESGVL---KDP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D + +    +F  + VV E +++ GI+T  D+   F  +L+   V  +M 
Sbjct: 97  ITIPPTMSVRDVMALTRLHKFSGLPVV-ENKRVVGIVTNRDVR--FETNLDQ-PVAAIMT 152

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E   L  A +L+ +H +  ++V++D  +  G++   D+++
Sbjct: 153 PFERLVTVKEGDSLEEARRLMHKHRLERVLVLNDAAELRGLITVKDMMK 201


>gi|116753621|ref|YP_842739.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665072|gb|ABK14099.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 261

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 62/128 (48%), Gaps = 3/128 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDI 272
           T       V     S+PL+     ++DA  ++ +++   + VVD    + L+G+++  DI
Sbjct: 57  TSTRSNVTVAGFTVSVPLITEEMDMMDAARLMFQEKVTLLPVVDSPSSRMLRGVVSLLDI 116

Query: 273 FRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           F++     +    V+ +M ++      D  ++     + + +I+ L VV++  + IGI+ 
Sbjct: 117 FKHLDLSRVPDKPVDAIMSRDVITARPDDPISKVWDRMLEEDITGLPVVNESGRPIGIIT 176

Query: 332 FLDLLRFG 339
             D+L+ G
Sbjct: 177 RFDILKRG 184



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 51/116 (43%), Gaps = 12/116 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----------HKDLNT 282
           +   P+      + E+    + VV+E  +  GIIT  DI +              KD   
Sbjct: 142 RPDDPISKVWDRMLEEDITGLPVVNESGRPIGIITRFDILKRGWARLGKEDMYRSKDTAK 201

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VE +M      I  D  L  A++++ +H+I  + VV++    +GIV   DL++ 
Sbjct: 202 IRVEKLMSTPLYSIKRDAPLRQAVEVMLKHDIGRISVVEND-VLVGIVDRYDLIKA 256



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M ++P  + +    T A QL+R +++  L V+D   + IGIV   D+LR 
Sbjct: 3   VADIMSRDPLYVEKTDFATRARQLIRDNHVRGLPVIDPEGRVIGIVTNQDMLRI 56



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 44/98 (44%), Gaps = 4/98 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A  ++ +     + V+D   ++ GI+T  D+ R      N          +  +I E+  
Sbjct: 23  ARQLIRDNHVRGLPVIDPEGRVIGIVTNQDMLRITSTRSNVTVAGF--TVSVPLITEEMD 80

Query: 302 LTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLR 337
           +  A +L+ Q  +++L VVD    +   G+V  LD+ +
Sbjct: 81  MMDAARLMFQEKVTLLPVVDSPSSRMLRGVVSLLDIFK 118



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  +K   PL  A+ ++ +   G ++VV E   L GI+   D+ +    
Sbjct: 201 KIRVEKLMSTPLYSIKRDAPLRQAVEVMLKHDIGRISVV-ENDVLVGIVDRYDLIKAVLG 259

Query: 279 DL 280
           D+
Sbjct: 260 DV 261


>gi|107028829|ref|YP_625924.1| inositol-5-monophosphate dehydrogenase [Burkholderia cenocepacia AU
           1054]
 gi|116690012|ref|YP_835635.1| inositol-5-monophosphate dehydrogenase [Burkholderia cenocepacia
           HI2424]
 gi|254247911|ref|ZP_04941232.1| IMP dehydrogenase [Burkholderia cenocepacia PC184]
 gi|105897993|gb|ABF80951.1| inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia AU
           1054]
 gi|116648101|gb|ABK08742.1| inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
           HI2424]
 gi|124872687|gb|EAY64403.1| IMP dehydrogenase [Burkholderia cenocepacia PC184]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|330816852|ref|YP_004360557.1| hypothetical protein bgla_1g19620 [Burkholderia gladioli BSR3]
 gi|327369245|gb|AEA60601.1| hypothetical protein bgla_1g19620 [Burkholderia gladioli BSR3]
          Length = 142

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMI 290
           V +   +  A   ++    G + V  E  +L GI+T+ D+  R    ++    ++ +V+ 
Sbjct: 15  VAVHDTIRHAAQHMAYYDVGALPVC-ERGRLVGIVTDRDLTVRALAGEVGPDEAIGEVLT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
           + P    +D  L    Q + +  I    VVD   + +G++   D+  R G
Sbjct: 74  RRPVCCRDDEDLDTVQQRMAEARIRRTPVVDGQGRLVGMLSLGDIATRAG 123



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   +     +  A Q +  +++  L V  +  + +GIV   DL 
Sbjct: 4   VREVMSRDVVSVAVHDTIRHAAQHMAYYDVGALPVC-ERGRLVGIVTDRDLT 54


>gi|295107982|emb|CBL21935.1| inosine-5'-monophosphate dehydrogenase [Ruminococcus obeum A2-162]
          Length = 484

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D  T  + + 
Sbjct: 96  DPFFLSADHTLEDANNLMAKFRISGVPIT-EGKKLVGIITNRDLK--FETDF-TKKIGEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 152 MTSEGLITAKEGITLEEAKKILAKSRKEKLPIVDDDFNLKGLITIKDI 199


>gi|285018358|ref|YP_003376069.1| inosine-5-monophosphate dehydrogenase [Xanthomonas albilineans GPE
           PC73]
 gi|283473576|emb|CBA16079.1| probable inosine-5-monophosphate dehydrogenase protein [Xanthomonas
           albilineans]
          Length = 485

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  +   +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPAQQAAEVVKVKKFEAGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD    L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VGPETTIGEVLKLTRARNISGVPVVDGSG-LVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       +QLL +H I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLQLLHRHRIEKILVVNDSFELRGLITVKDIQKK 203


>gi|239815739|ref|YP_002944649.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus S110]
 gi|239802316|gb|ACS19383.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus S110]
          Length = 489

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +F       ++  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNFTAAEQAAQVAKVKRYESGVLR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  E       V+D G K+ GI+T  D+     ++   + V ++M 
Sbjct: 97  VVITPTHTVLQVMQLSDELGISGFPVLD-GGKVVGIVTGRDLRF---ENRYDVPVSEIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + + T L  A  LL +H +  L+V++   +  G++   D+ +
Sbjct: 153 PRDKLITVPDGTTLAEAKALLNKHKLERLLVINSAWELKGLITVKDITK 201


>gi|206560426|ref|YP_002231190.1| inosine 5'-monophosphate dehydrogenase [Burkholderia cenocepacia
           J2315]
 gi|198036467|emb|CAR52363.1| inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
           J2315]
          Length = 486

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|126735621|ref|ZP_01751366.1| CBS domain protein [Roseobacter sp. CCS2]
 gi|126714808|gb|EBA11674.1| CBS domain protein [Roseobacter sp. CCS2]
          Length = 144

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           VK    + DA  +LS+ R G V V  +G+ L GI++E DI R   K         V D+M
Sbjct: 18  VKPTATVTDAAKLLSKHRIGTVVVSADGETLDGILSERDIVRELGKRGMGCLNDPVRDLM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                           ++++       L V+D+  K +G++   D ++
Sbjct: 78  TAKLTTCGPSNNALEVLEIMTAGRFRHLPVMDN-GKMVGLISIGDAVK 124



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 22/45 (48%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     +T A +LL +H I  ++V  D +   GI+   D++R 
Sbjct: 16  ISVKPTATVTDAAKLLSKHRIGTVVVSADGETLDGILSERDIVRE 60


>gi|77406654|ref|ZP_00783697.1| AcuB family protein [Streptococcus agalactiae H36B]
 gi|77174726|gb|EAO77552.1| AcuB family protein [Streptococcus agalactiae H36B]
          Length = 219

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLVGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GIV   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIVTDRDVFKA 129



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LVGLVT 48



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GI+T+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAF 130


>gi|22537717|ref|NP_688568.1| AcuB family protein [Streptococcus agalactiae 2603V/R]
 gi|76786880|ref|YP_330197.1| hypothetical protein SAK_1593 [Streptococcus agalactiae A909]
 gi|76799160|ref|ZP_00781343.1| AcuB family protein [Streptococcus agalactiae 18RS21]
 gi|22534606|gb|AAN00441.1|AE014263_20 AcuB family protein [Streptococcus agalactiae 2603V/R]
 gi|76561937|gb|ABA44521.1| CBS domain protein [Streptococcus agalactiae A909]
 gi|76585490|gb|EAO62065.1| AcuB family protein [Streptococcus agalactiae 18RS21]
          Length = 219

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLVGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GIV   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIVTDRDVFKA 129



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LVGLVT 48



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GI+T+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIVTDRDVFKAF 130


>gi|229143445|ref|ZP_04271871.1| CBS domain protein [Bacillus cereus BDRD-ST24]
 gi|228639947|gb|EEK96351.1| CBS domain protein [Bacillus cereus BDRD-ST24]
          Length = 147

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +     + S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIIMTRVRDLMSTHIVHCTPLD-NVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + ++M  N   +  +  +  A +L+ QH I  L VVD   + IG+
Sbjct: 61  LVVRGIAEKHPGSNKITNIMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 66


>gi|209521536|ref|ZP_03270238.1| glucokinase [Burkholderia sp. H160]
 gi|209498036|gb|EDZ98189.1| glucokinase [Burkholderia sp. H160]
          Length = 638

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 68/195 (34%), Gaps = 7/195 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAQVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESRNFSENDFY 205
           + +   R    +D  
Sbjct: 593 VGVAIRRAVPSDDVA 607


>gi|254414730|ref|ZP_05028495.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196178578|gb|EDX73577.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1405

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 10/115 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHK--DLNTLSVED 287
           V     + +A+  +++    C+ V+        + GI TE D  +      D  TLS+  
Sbjct: 24  VTPDISVEEALARMTQTHSSCLLVLANHQPNSPVVGIFTERDTVQLIASGVDWRTLSLAS 83

Query: 288 VMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLLR 337
           VM  +   I E     +   +  LRQ+ I  L VV +    IG++      D+L+
Sbjct: 84  VMTTSVMTITETEAQDIVTVINCLRQYKIRHLPVVGERGNLIGVITPQTIRDVLQ 138



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 50/139 (35%), Gaps = 37/139 (26%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--------------------------------- 261
               +++   +++ +R  CV +V E +                                 
Sbjct: 161 ETTSILELAQLMNAQRVSCVVIVKEAEFPVSQQNSVKAAFAETLPIAQPNFLNPPLHTQN 220

Query: 262 --KLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             +  GI+TE DI +  N   DL    V  VM     +I     +  A QL++QH +  L
Sbjct: 221 LLRPIGIVTERDIVQFGNLGLDLANTPVTTVMSTPLLLIQPTDSIWSAHQLMQQHRVRRL 280

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +V  +  +  G++    +L
Sbjct: 281 VVSGEAGELAGLITQTQIL 299



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 48/138 (34%), Gaps = 37/138 (26%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI 296
           ++  I  L + +   + VV E   L G+IT   I         LN   V DVM       
Sbjct: 100 IVTVINCLRQYKIRHLPVVGERGNLIGVITPQTIRDVLQPVDLLNHKKVSDVMATRVIHA 159

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQ-------------------------------- 324
           +E T +    QL+    +S +++V + +                                
Sbjct: 160 METTSILELAQLMNAQRVSCVVIVKEAEFPVSQQNSVKAAFAETLPIAQPNFLNPPLHTQ 219

Query: 325 ---KAIGIVHFLDLLRFG 339
              + IGIV   D+++FG
Sbjct: 220 NLLRPIGIVTERDIVQFG 237



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 6/57 (10%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLD---LLRFGI 340
            + P  +  D  +  A+  + Q + S L+V+ + Q     +GI    D   L+  G+
Sbjct: 18  NRYPLTVTPDISVEEALARMTQTHSSCLLVLANHQPNSPVVGIFTERDTVQLIASGV 74


>gi|254228659|ref|ZP_04922083.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. Ex25]
 gi|151938838|gb|EDN57672.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. Ex25]
          Length = 504

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 81/220 (36%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 13  EILQMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMD 66

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    + ++        V     + 
Sbjct: 67  TVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGMV---TDAVTVNPDATIA 123

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK--VILE 298
           D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM    K   + E
Sbjct: 124 DVVALTEKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMTPKEKLAAVKE 180

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 181 GATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 220


>gi|65318148|ref|ZP_00391107.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
          Length = 143

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  L  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 67  KITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|330507501|ref|YP_004383929.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928309|gb|AEB68111.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 160

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 56/146 (38%), Gaps = 37/146 (25%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
                  V+    + +A  +L E +   + V+D G++L GI++E D+ R           
Sbjct: 7   MNVMPVSVQASANVSEAARLLKENKISGMPVLD-GERLVGIVSESDLLRLLSVEDESEGS 65

Query: 278 ---------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                      K++    V DVM +N   I  D  +  A  ++ 
Sbjct: 66  LWLPSPFEIFEVPFRDLVKWERMRSSLKEIPEKEVADVMSRNLHEIGPDDSIEEAASIMT 125

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
           +H I+ L VV +  + +GIV   D++
Sbjct: 126 RHRINRLPVV-EDGRLVGIVTRGDII 150



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V DVM   P  +     ++ A +LL+++ IS + V+D  ++ +GIV   DLLR 
Sbjct: 1   MKVRDVMNVMPVSVQASANVSEAARLLKENKISGMPVLD-GERLVGIVSESDLLRL 55



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 1/70 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D                         ++  +     + +A +I++  R   + VV E  +
Sbjct: 81  DLVKWERMRSSLKEIPEKEVADVMSRNLHEIGPDDSIEEAASIMTRHRINRLPVV-EDGR 139

Query: 263 LKGIITEGDI 272
           L GI+T GDI
Sbjct: 140 LVGIVTRGDI 149


>gi|261340808|ref|ZP_05968666.1| inosine-5'-monophosphate dehydrogenase [Enterobacter cancerogenus
           ATCC 35316]
 gi|288317234|gb|EFC56172.1| inosine-5'-monophosphate dehydrogenase [Enterobacter cancerogenus
           ATCC 35316]
          Length = 488

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGIV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLHEVKALTERNGFAGYPVVTEDYELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V +  + +  +   +VVD      G++   D  + 
Sbjct: 155 PKERLVTVREGETRDVVLAKMHEKRVEKALVVDSSFHLRGMITVKDFQKA 204


>gi|15602160|ref|NP_245232.1| inositol-5-monophosphate dehydrogenase [Pasteurella multocida
           subsp. multocida str. Pm70]
 gi|13959397|sp|Q9L6B7|IMDH_PASMU RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|7716503|gb|AAF68407.1|AF237921_1 inosine-5'-monophosphate dehydrogenase [Pasteurella multocida]
 gi|12720528|gb|AAK02379.1| GuaB [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 487

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/166 (22%), Positives = 61/166 (36%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI+L +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTETKLAISLAQEGGIGFIHKNMSIERQAERVRKVKKFESGIV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   ++ +  F    VVD+ + L GIIT  D    F  DLN  +V D M 
Sbjct: 98  VTVSPTLSLAELSELVKKNGFASFPVVDDEKNLVGIITGRDTR--FVTDLNK-TVADFMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  +  +        L+  H +  ++VV D  K  G++   D
Sbjct: 155 PKARLVTVKRNASRDEIFGLMHTHRVEKVLVVSDDFKLKGMITLKD 200


>gi|157364565|ref|YP_001471332.1| CBS domain-containing protein [Thermotoga lettingae TMO]
 gi|157315169|gb|ABV34268.1| CBS domain containing protein [Thermotoga lettingae TMO]
          Length = 875

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +      + +   I+       + V+ E  KL GI+T+  + R  +  L    V
Sbjct: 314 MSFPVRVAYAEMSISEVNKIMERTGHNGLPVI-EDNKLVGIVTKKAVDRAMNHGLQKHPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +M     V+  +T L    Q++ +++I  + VV +    +GI+   D++R
Sbjct: 373 KSIMSGKLIVVSPETPLNKIRQIMIENDIGRIPVV-ENGILVGIITRTDVMR 423



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              D+M    +V   +  ++   +++ +   + L V+ +  K +GIV 
Sbjct: 309 KARDIMSFPVRVAYAEMSISEVNKIMERTGHNGLPVI-EDNKLVGIVT 355


>gi|302348914|ref|YP_003816552.1| Inosine-5'-monophosphate dehydrogenase related protein IV
           [Acidilobus saccharovorans 345-15]
 gi|302329326|gb|ADL19521.1| Inosine-5'-monophosphate dehydrogenase related protein IV
           [Acidilobus saccharovorans 345-15]
          Length = 282

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 46/110 (41%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVM 289
           +    + +A++++ +       +V    +  G  T  D+          DL  L +E+ M
Sbjct: 97  RPDQSVKEAVSLMIKADEWASPIVGLDGRFLGFFTFDDLISLAANYCKDDLKDLVIENYM 156

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            K P    ED  ++     +R+   + L VVD   + +G++   DL+  G
Sbjct: 157 TKGPVAAEEDEFISKIWNKMRELRYAGLPVVDSNGRLVGMITQYDLISKG 206



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 11/105 (10%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKDL---NTLSVEDVMIKNPKV 295
            + E R+  + VVD   +L G+IT+ D+        +   +        V+DVM + P  
Sbjct: 175 KMRELRYAGLPVVDSNGRLVGMITQYDLISKGYSRIHLESEAGASRGPRVKDVMTRGPIY 234

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +   + +   + L+ +H    + +V+  +  K +GI+   D+ R 
Sbjct: 235 LFPWSTVYEVVSLMSRHGYGRIPIVNSSKELKLVGIIDREDIARL 279



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 3/127 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G       +   D+  S      V     L +   I+ E+    VAVVD   +L GIIT 
Sbjct: 13  GKIGELKILNVIDLGRSSKIS--VNPQTKLSEVRRIVREEAVRSVAVVDNDGRLLGIITR 70

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G I               +  +    +  D  +  A+ L+ + +     +V    + +G 
Sbjct: 71  GTIL-TVASSKTEAVAGSLAEQPLVTLRPDQSVKEAVSLMIKADEWASPIVGLDGRFLGF 129

Query: 330 VHFLDLL 336
             F DL+
Sbjct: 130 FTFDDLI 136



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 15/90 (16%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + ++   +     +  +H   + G         + +   I L      + + ++++S   
Sbjct: 194 VGMITQYDLISKGYSRIHLESEAGASRGPRVKDVMTRGPIYL-FPWSTVYEVVSLMSRHG 252

Query: 251 FGCVAVVDEGQ--KLKGIITEGDIFRNFHK 278
           +G + +V+  +  KL GII   DI R   +
Sbjct: 253 YGRIPIVNSSKELKLVGIIDREDIARLVTR 282


>gi|301058158|ref|ZP_07199210.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300447790|gb|EFK11503.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 655

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIK 291
                +     I+SEKR G V + D+ +++ GI+T+ DI  +   + L+      ++M  
Sbjct: 195 PASATVQQISRIMSEKRIGSVLLTDDREEVIGIVTDKDIRGKVVAQGLDYQTKASEIMTA 254

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + I   ++   A+  + +  I  L  +++  K   ++   D++
Sbjct: 255 PVQTISGQSVCFDALLAMIKRRIHHL-AIEENGKISKMLTTHDIM 298



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/62 (17%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L T    ++             +    +++ +  I  +++ DD ++ IGIV   D+ R  
Sbjct: 178 LFTAKAGEISKGRLFTAPASATVQQISRIMSEKRIGSVLLTDDREEVIGIVTDKDI-RGK 236

Query: 340 II 341
           ++
Sbjct: 237 VV 238


>gi|271964532|ref|YP_003338728.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
 gi|270507707|gb|ACZ85985.1| signal-transduction protein [Streptosporangium roseum DSM 43021]
          Length = 142

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KD 279
           +   G  +  V     + + + +L+E   G V V ++G  + GI++E D+ R  +    D
Sbjct: 7   LQGKGTDVTTVHPEATVTELLELLAEHNIGAVVVSEDGSSIAGIVSERDVVRRLNDRGAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + T  V  +M  + +       +    Q +  H I  + VV    +  GIV   D+++  
Sbjct: 67  VLTAPVSSIMTTDVRTCPPTANVDDLRQTMTTHRIRHVPVV-ADDRLAGIVSIGDVVKSA 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|319644876|ref|ZP_07999109.1| HxlB protein [Bacillus sp. BT1B_CT2]
 gi|317392685|gb|EFV73479.1| HxlB protein [Bacillus sp. BT1B_CT2]
          Length = 185

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 79/177 (44%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     +      +  I + + +V +TG G+SG +G   A  L   G  +F   
Sbjct: 11  IAELDHATSQTQAEGIENFISSIMSSE-KVFVTGAGRSGLMGKSFAMRLMHLGINAFVTG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +DL+IV + SG ++ L  +   A+     + A+T+ + S +A  AD
Sbjct: 70  ETVTP-----AFTENDLLIVGTGSGKTESLLHMAEKAKDIGGTVAAVTTSSDSPIAEIAD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
           ++L LP  P+    G    + P  S   Q  +   DA+ + ++E +  + ++ Y  H
Sbjct: 125 LILQLPGSPKDQTTGSKQTIQPMGSLFEQTLLLIYDAIILRIMEIKGLNTHNMYANH 181


>gi|269965177|ref|ZP_06179311.1| inositol-5-monophosphate dehydrogenase [Vibrio alginolyticus 40B]
 gi|269830163|gb|EEZ84390.1| inositol-5-monophosphate dehydrogenase [Vibrio alginolyticus 40B]
          Length = 504

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 43/220 (19%), Positives = 81/220 (36%), Gaps = 19/220 (8%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLPKEPESCPHGLAPTTSAIMQ 182
           E+  +L  A+       A+T ++  +V  H+ +      L  +         P  SA M 
Sbjct: 13  EILQMLRIAKE------ALTFDDVLLVPAHSTVLPNTADLRTQLTKNITLNIPMISASMD 66

Query: 183 LAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI 240
                 LAIAL +     F   +  +     ++  +    + ++        V     + 
Sbjct: 67  TVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGMV---TDAVTVNPDATIA 123

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK--VILE 298
           D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM    K   + E
Sbjct: 124 DVVALTEKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMTPKEKLAAVKE 180

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 181 GATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 220


>gi|149185248|ref|ZP_01863565.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
 gi|148831359|gb|EDL49793.1| hypothetical protein ED21_19382 [Erythrobacter sp. SD-21]
          Length = 177

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-- 282
            S   I  V +  P+ DAIT+L+ KR G + V+ E  ++ GI +E D+      +  T  
Sbjct: 44  RSSSDIISVTVDQPVSDAITLLASKRIGALPVM-EEGRVAGIFSERDVIYRLAHEGETCL 102

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + +VM      +    L+  A+ L+ +  I  L V+D  +   G +   DL++
Sbjct: 103 SRRIGEVMTSPAITVERSMLVDQALALMTRRRIRHLPVID-GEAMCGFISIGDLVK 157


>gi|291279871|ref|YP_003496706.1| CBS domain containing protein [Deferribacter desulfuricans SSM1]
 gi|290754573|dbj|BAI80950.1| CBS domain containing protein [Deferribacter desulfuricans SSM1]
          Length = 220

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/121 (28%), Positives = 51/121 (42%), Gaps = 13/121 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               I +V     ++DA+ ++ E  F  + V+ EG +L GIITE DI             
Sbjct: 7   MKKDIVVVNKNDTILDALHLMREHGFRRLPVL-EGDRLVGIITEKDIKDFSPSKATTLDI 65

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L    V+D M K+   +  D  +  A  LLR      L VVD     +G++  +
Sbjct: 66  YELHNILAKYEVKDAMTKDVITVSPDDPIEKAAILLRDKRFGGLPVVDGEGNLVGLITAV 125

Query: 334 D 334
           D
Sbjct: 126 D 126



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+D M K+  V+ ++  +  A+ L+R+H    L V+ +  + +GI+   D+
Sbjct: 3   VKDWMKKDIVVVNKNDTILDALHLMREHGFRRLPVL-EGDRLVGIITEKDI 52



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 30/81 (37%), Gaps = 7/81 (8%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMH-------SGDSIPLVKIGCPLIDAITILSEKRF 251
            +E D     P            +++            +  V    P+  A  +L +KRF
Sbjct: 47  ITEKDIKDFSPSKATTLDIYELHNILAKYEVKDAMTKDVITVSPDDPIEKAAILLRDKRF 106

Query: 252 GCVAVVDEGQKLKGIITEGDI 272
           G + VVD    L G+IT  D+
Sbjct: 107 GGLPVVDGEGNLVGLITAVDV 127


>gi|296109952|ref|YP_003616901.1| CBS domain containing membrane protein [Methanocaldococcus infernus
           ME]
 gi|295434766|gb|ADG13937.1| CBS domain containing membrane protein [Methanocaldococcus infernus
           ME]
          Length = 139

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 34/125 (27%), Positives = 57/125 (45%), Gaps = 6/125 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  +      + A   + + +   + VVD G+KL GI+T  DI  N  K
Sbjct: 7   RIKVKDVMTREVITINKDELAVKAFEKMLKYKISSLPVVD-GEKLIGIVTTTDIGYNLIK 65

Query: 279 DLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFL 333
           D  TL  +VEDVM K    + ED  +  A++ +       I+ L V++  +K +GI+   
Sbjct: 66  DKYTLETTVEDVMTKEVITVYEDESIIEAIKKMDVKKEEIINQLPVLNREEKLVGIISDG 125

Query: 334 DLLRF 338
           D++R 
Sbjct: 126 DIIRL 130



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +L  + V+DVM +    I +D L   A + + ++ IS L VVD  +K IGIV   D+
Sbjct: 1   MLDELKRIKVKDVMTREVITINKDELAVKAFEKMLKYKISSLPVVD-GEKLIGIVTTTDI 59



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKR---FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V     +I+AI  +  K+      + V++  +KL GII++GDI R   K
Sbjct: 78  MTKEVITVYEDESIIEAIKKMDVKKEEIINQLPVLNREEKLVGIISDGDIIRLLSK 133


>gi|238018905|ref|ZP_04599331.1| hypothetical protein VEIDISOL_00765 [Veillonella dispar ATCC 17748]
 gi|237864389|gb|EEP65679.1| hypothetical protein VEIDISOL_00765 [Veillonella dispar ATCC 17748]
          Length = 151

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 27/136 (19%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDLNTLS 284
              V    P+ D   +L +     V+VVD+  KL GII+EGD+       +    +N L 
Sbjct: 11  PVTVGKDAPISDVADLLVKYNLTAVSVVDDNNKLLGIISEGDLLYKKVRPHVPHYVNVLG 70

Query: 285 VE----------------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                                   ++M +       D  +   + ++   ++  + VVD 
Sbjct: 71  ASIYYNGIGEYNAQFKKLLASHVHELMTEEVITTTPDKDVEEIVSVMLDQHLKNVPVVDK 130

Query: 323 CQKAIGIVHFLDLLRF 338
               IGI+   D+++ 
Sbjct: 131 DYHLIGILSRRDIIKL 146



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 34/58 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +++VM K P  + +D  ++    LL ++N++ + VVDD  K +GI+   DLL   +
Sbjct: 1   MKIQEVMNKYPVTVGKDAPISDVADLLVKYNLTAVSVVDDNNKLLGIISEGDLLYKKV 58



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + + ++++ ++    V VVD+   L GI++  DI +   KD
Sbjct: 106 PDKDVEEIVSVMLDQHLKNVPVVDKDYHLIGILSRRDIIKLIAKD 150


>gi|71898758|ref|ZP_00680927.1| IMP dehydrogenase [Xylella fastidiosa Ann-1]
 gi|71731523|gb|EAO33585.1| IMP dehydrogenase [Xylella fastidiosa Ann-1]
          Length = 485

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI + +         +  +     ++  +    S V+      
Sbjct: 41  KLPILSAAMDTVTEARLAIVMAQLGGIGIIHKNLTIEQQVAEVTKVKKYESGVIR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +   K    V VVD+  +L G++T  D+   F ++L+   V  +M 
Sbjct: 98  ITVDPETSIRDVLALTRAKNISGVPVVDK-GQLIGLVTHRDMR--FERELDD-PVRHIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       +QLL +H I  ++VV+D  +  G++   D+ + 
Sbjct: 154 KKEALVTVKEGADSQEVLQLLHKHRIEKILVVNDAFELRGLITVKDIQKK 203


>gi|332852868|ref|ZP_08434450.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332866715|ref|ZP_08437177.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332873571|ref|ZP_08441520.1| CBS domain protein [Acinetobacter baumannii 6014059]
 gi|332728982|gb|EGJ60333.1| CBS domain protein [Acinetobacter baumannii 6013150]
 gi|332734484|gb|EGJ65599.1| CBS domain protein [Acinetobacter baumannii 6013113]
 gi|332738268|gb|EGJ69146.1| CBS domain protein [Acinetobacter baumannii 6014059]
          Length = 351

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
           +  ++     ++ A+ +L       V VVD+  +L G IT+GDI R   K  +   SV+ 
Sbjct: 6   NNIILHKNDSILKALELLDLYALRIVLVVDDNNQLIGSITDGDIRRGLLKGQDLHASVDT 65

Query: 288 VMIKNPKVILEDTL-LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +M  NP  I E +L      +++R+ +   L ++    + + I+   DL+R  
Sbjct: 66  IMHTNPYSIEEGSLDNRQIFEIMREKSYLALPII-KNNQLVNIITLDDLIRKK 117



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           M +  N  ++ ++  +  A++LL  + + +++VVDD  + IG +   D+ R G++
Sbjct: 1   MTRDVNNIILHKNDSILKALELLDLYALRIVLVVDDNNQLIGSITDGDI-RRGLL 54


>gi|225568709|ref|ZP_03777734.1| hypothetical protein CLOHYLEM_04788 [Clostridium hylemonae DSM
           15053]
 gi|225162208|gb|EEG74827.1| hypothetical protein CLOHYLEM_04788 [Clostridium hylemonae DSM
           15053]
          Length = 484

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IVHKNMPIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++S+ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPEHTLADANDLMSKFRISGVPIT-EGKKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLITAPEGITLDEAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|30018896|ref|NP_830527.1| inosine-5'-monophosphate dehydrogenase related protein [Bacillus
           cereus ATCC 14579]
 gi|29894438|gb|AAP07728.1| Inosine-5'-monophosphate dehydrogenase related protein [Bacillus
           cereus ATCC 14579]
          Length = 139

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 67  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|28199329|ref|NP_779643.1| inositol-5-monophosphate dehydrogenase [Xylella fastidiosa
           Temecula1]
 gi|182682054|ref|YP_001830214.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa M23]
 gi|28057435|gb|AAO29292.1| inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa
           Temecula1]
 gi|182632164|gb|ACB92940.1| inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa M23]
 gi|307578322|gb|ADN62291.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa subsp.
           fastidiosa GB514]
          Length = 485

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI + +         +  +     ++  +    S V+      
Sbjct: 41  KLPILSAAMDTVTEARLAIVMAQLGGIGIIHKNLTIEQQVAEVTKVKKYESGVIR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +   K    V VVD+  +L G++T  D+   F ++L+   V  +M 
Sbjct: 98  ITVDPETSIRDVLALTRAKNISGVPVVDK-GQLIGLVTHRDMR--FERELDD-PVRHIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K      + E       +QLL +H I  ++VV+D  +  G++   D+ + 
Sbjct: 154 KKEALVTVKEGADSQEVLQLLHKHRIEKILVVNDAFELRGLITVKDIQKK 203


>gi|85714637|ref|ZP_01045624.1| nucleoside-diphosphate-sugar pyrophosphorylase [Nitrobacter sp.
           Nb-311A]
 gi|85698522|gb|EAQ36392.1| nucleoside-diphosphate-sugar pyrophosphorylase [Nitrobacter sp.
           Nb-311A]
          Length = 349

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-SVED 287
            I L+     L +A+ ++       V +VDE ++L G +++GD+ R   + L     V  
Sbjct: 5   EIVLIDPELSLREALEVIDRAGTRMVLIVDENRRLLGTLSDGDVRRGLLRGLTLTDRVSQ 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M  NP V   D  +   +  +R   +  + ++D     +G+    DLL
Sbjct: 65  SMHVNPTVAKSDEDIPAIIASMRSRGVYQMPILDHEGIVVGLQTIDDLL 113


>gi|315641257|ref|ZP_07896334.1| CBS domain protein [Enterococcus italicus DSM 15952]
 gi|315483024|gb|EFU73543.1| CBS domain protein [Enterococcus italicus DSM 15952]
          Length = 215

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               +  V    P+ DAI ++       + VV E   L G+ITEG I             
Sbjct: 7   MTKKVVTVTPATPVFDAIDVMKAHNIHRLPVV-EEGHLVGLITEGVIQSALPSKATSLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +N  +V D+MIK+   I    LL  A+  +R ++++VL V+D+    +GI+   
Sbjct: 66  YELNYLINKTNVSDIMIKDVLTIQPTALLEDAIAKMRTNSVAVLPVLDNGN-LVGIITNN 124

Query: 334 DLLRF 338
           D+   
Sbjct: 125 DIFDA 129



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV D M K    +   T +  A+ +++ HNI  L VV++    +G++ 
Sbjct: 1   MSVSDFMTKKVVTVTPATPVFDAIDVMKAHNIHRLPVVEE-GHLVGLIT 48


>gi|300928587|ref|ZP_07144110.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300463387|gb|EFK26880.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
          Length = 285

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 70/179 (39%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK  +  LE +       +    ++ I   +  + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKELV--LEQTCALFDYARLQKIIDVISKAQ-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|294142017|ref|YP_003557995.1| acetoin utilization protein AcuB [Shewanella violacea DSS12]
 gi|293328486|dbj|BAJ03217.1| acetoin utilization protein AcuB, putative [Shewanella violacea
           DSS12]
          Length = 138

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               I  +++   L  A  I     F  + V+ E  KL+GI++E D  R    ++     
Sbjct: 13  MTSRIVTIEMDDRLTVAKEIFDNAPFHHLLVI-EHNKLRGILSERDYLRALSPNIGNINE 71

Query: 283 ---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                         VM ++P  I  +  +  A +LL QH+I  L V+D   K +GI+ + 
Sbjct: 72  TERDSETLQKRAHQVMTRSPVTIAPNQTIKQAGELLLQHDIGSLPVLDK-GKLVGIITWK 130

Query: 334 DLLRF 338
           DLL+ 
Sbjct: 131 DLLKA 135



 Score = 43.0 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V D+M      I  D  LTVA ++        L+V+ +  K  GI+   D LR 
Sbjct: 6   NIRVSDIMTSRIVTIEMDDRLTVAKEIFDNAPFHHLLVI-EHNKLRGILSERDYLRA 61


>gi|283852438|ref|ZP_06369707.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
 gi|283572176|gb|EFC20167.1| CBS domain containing membrane protein [Desulfovibrio sp. FW1012B]
          Length = 129

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 1/115 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    L DA+  + E     + VVDE  +L G++T+ D+    HK   T  +
Sbjct: 7   MTSQLRCLRETDSLADAVAAMQELFIRHIPVVDEAGRLAGLVTQRDLLSLEHKKDPTTPL 66

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            D+M  +   +  DT L  A + +  +    L VV+     +GI+   D L+  I
Sbjct: 67  RDIMRSDVATVSPDTPLRAAAETMIYNKYGCLPVVEAGG-LVGIITETDFLKLAI 120



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 26/52 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M    + + E   L  A+  +++  I  + VVD+  +  G+V   DLL
Sbjct: 3   VADLMTSQLRCLRETDSLADAVAAMQELFIRHIPVVDEAGRLAGLVTQRDLL 54


>gi|222445691|ref|ZP_03608206.1| hypothetical protein METSMIALI_01332 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435256|gb|EEE42421.1| hypothetical protein METSMIALI_01332 [Methanobrevibacter smithii
           DSM 2375]
          Length = 196

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 45/195 (23%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI A    +   E  L  +   +F    E I   K  V +TG G+SG      A  L   
Sbjct: 7   SIKAILDNIICAEEFLDEDAINEFE---EIIMNSKN-VFVTGAGRSGLAAKAFAMRLMHL 62

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  S+ V    +       I  DD II +S SG ++ + +    A+     ++A+TS  +
Sbjct: 63  GISSYVVGETISP-----AIYDDDCIIAISGSGETNTIVSAARIAKNRGSKVLAVTSYPE 117

Query: 150 SVVACHADIVLTLP----------------KEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           S +   AD  L +                             T   +  L   DA+   L
Sbjct: 118 STLGQLADGHLLVKGRTKKEVDDQNYMKRQIYGNYTSLTPLGTAFELTTLVFLDAIVSEL 177

Query: 194 LESRNFSENDFYVLH 208
           +E  + +E+D    H
Sbjct: 178 MEKMHQTESDLKSRH 192


>gi|222444594|ref|ZP_03607109.1| hypothetical protein METSMIALI_00206 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350868|ref|ZP_05976285.1| homoserine O-acetyltransferase [Methanobrevibacter smithii DSM
           2374]
 gi|222434159|gb|EEE41324.1| hypothetical protein METSMIALI_00206 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860205|gb|EFC92503.1| homoserine O-acetyltransferase [Methanobrevibacter smithii DSM
           2374]
          Length = 491

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  ++       + VV  G+KL GI+T  D+ +    + N L  
Sbjct: 376 MITDVVTITEQAQIEEAAKLMFNLNVTHIPVVTNGKKLIGIVTSWDLSKAIATNSNDL-- 433

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +++M K  K    D  +    + +R+ +IS L VVDD  K  GI+ 
Sbjct: 434 KEIMTKTVKFCHADDSIESTARRMRKLDISCLPVVDDDFKLKGIIS 479



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +     K L+   VED+MI +   I E   +  A +L+   N++ + VV + +K IGI
Sbjct: 357 GQLNYILSKFLSDNIVEDLMITDVVTITEQAQIEEAAKLMFNLNVTHIPVVTNGKKLIGI 416

Query: 330 VHFLDLLRF 338
           V   DL + 
Sbjct: 417 VTSWDLSKA 425


>gi|169830475|ref|YP_001716457.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169637319|gb|ACA58825.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 153

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V     +     +L E     + VVDEG KL G++TEGD+             
Sbjct: 10  MTSEVITVHPEDDVEKVAQLLLEHHISGLPVVDEGGKLVGVVTEGDLVFREKKVRAPLYV 69

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F +++       V D+M      +  +  +     ++    I+ + 
Sbjct: 70  MVFDSLIYLEKPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIEDVATIIVDRGINRVP 129

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD   + +GI+   D++R 
Sbjct: 130 VVDAENRLLGIISRQDIIRA 149



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +  +D+M      +  +  +    QLL +H+IS L VVD+  K +G+V   DL+
Sbjct: 1   MSKMLAKDIMTSEVITVHPEDDVEKVAQLLLEHHISGLPVVDEGGKLVGVVTEGDLV 57



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            P   +  +    +  +    S  L  V    P+ D  TI+ ++    V VVD   +L G
Sbjct: 80  KPKRFIEEIRRTVAQKVGDLMSTKLYTVGPEAPIEDVATIIVDRGINRVPVVDAENRLLG 139

Query: 266 IITEGDIFRN 275
           II+  DI R 
Sbjct: 140 IISRQDIIRA 149


>gi|160914592|ref|ZP_02076806.1| hypothetical protein EUBDOL_00599 [Eubacterium dolichum DSM 3991]
 gi|158433132|gb|EDP11421.1| hypothetical protein EUBDOL_00599 [Eubacterium dolichum DSM 3991]
          Length = 215

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------- 274
               +   + +   + + + I++++    + VV  G+KL G++TE  I +          
Sbjct: 6   RMTKNPVCIDVNSKISEVVDIMNDRELHRIPVV-SGKKLVGLVTESMISKQGATKATSLS 64

Query: 275 --NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+  SV+ +MI++   I ED  L  A  ++ +H+I  L VV+D  + +GI+  
Sbjct: 65  IYELNYLLSKTSVDAIMIRDVITIHEDRFLEDAALVMFKHDIGCLPVVNDANEVVGILTS 124

Query: 333 LDLLRF 338
            D+L  
Sbjct: 125 NDVLSA 130



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 25/58 (43%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             S        +  +     L DA  ++ +   GC+ VV++  ++ GI+T  D+   F
Sbjct: 74  KTSVDAIMIRDVITIHEDRFLEDAALVMFKHDIGCLPVVNDANEVVGILTSNDVLSAF 131


>gi|91977737|ref|YP_570396.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisB5]
 gi|91684193|gb|ABE40495.1| conserved hypotehtical protein [Rhodopseudomonas palustris BisB5]
          Length = 143

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V+    L  A+  LSE+R G V V+  G +L GI++E DI +             V  VM
Sbjct: 17  VEPDERLSAAVKTLSERRIGAVLVM-RGTRLDGILSERDIVKVLADRGAAALDDPVHAVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++     ++  +   M+++       L V+D   + +G++   D+++
Sbjct: 76  TRDVVSCAQNDTVGEIMEVMTSQKFRHLPVLDGDDRVVGLISIGDIVK 123



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 225 HSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           H+  +  +V       + + + +++ ++F  + V+D   ++ G+I+ GDI + 
Sbjct: 72  HAVMTRDVVSCAQNDTVGEIMEVMTSQKFRHLPVLDGDDRVVGLISIGDIVKW 124


>gi|292656511|ref|YP_003536408.1| CBS domain pair [Haloferax volcanii DS2]
 gi|291371699|gb|ADE03926.1| CBS domain pair, putative [Haloferax volcanii DS2]
          Length = 380

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     L  AI  L E     + VV++  +L+GI+T  D+     +D             
Sbjct: 135 VGERDHLGQAINRLREHGVSRLPVVNDEGRLEGILTTYDLVEFMVRDEGRQGKQDRRGDT 194

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDL 335
             +  L V D+M    +    D  +  A+  + +H+I+ L+V   DD  + +G+V   D+
Sbjct: 195 DRMLDLPVYDLMTSPARTATPDESVRDAVARMLEHDIAGLVVTPADDDGEVLGVVTKTDV 254

Query: 336 LRF 338
           LR 
Sbjct: 255 LRA 257



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 1/100 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +   +L E       V  EG+K  GIIT+  I      +L+ L+VE +   +   + E
Sbjct: 79  VREVARMLVEGDTKVAPVY-EGEKQYGIITQDAILEAVLDNLDALTVEQIYTDDVVTVGE 137

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L  A+  LR+H +S L VV+D  +  GI+   DL+ F
Sbjct: 138 RDHLGQAINRLREHGVSRLPVVNDEGRLEGILTTYDLVEF 177



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF 276
               + DA+  + E     + V   D+  ++ G++T+ D+ R  
Sbjct: 215 PDESVRDAVARMLEHDIAGLVVTPADDDGEVLGVVTKTDVLRAL 258


>gi|300215481|gb|ADJ79894.1| Transcriptional regulator, RpiR family [Lactobacillus salivarius
           CECT 5713]
          Length = 274

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           +   H  V  I   + RV + G+G SG+   +    L   G  +F    +     D  ++
Sbjct: 110 TDTIHNIVHAITKAR-RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 168

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             DD+II +S SG++D++      A++    +I+IT   +S +   +   +    +  + 
Sbjct: 169 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTWSVV--VKNSNF 226

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                   S +  + + D + + L+E   +S 
Sbjct: 227 VDNTRFINSQLAIVYVIDIITMELMEKSEYSS 258


>gi|297846924|ref|XP_002891343.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337185|gb|EFH67602.1| hypothetical protein ARALYDRAFT_314186 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 192

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVED 287
            +    + DA+  +++   G + V+   + Q + GI+TE D  +      +      V D
Sbjct: 61  CRTNDTVSDAVKNMAKHNIGSLVVLKPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGD 120

Query: 288 VMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM        +   T +  AMQL+ +++I  + V+D   K +G++  +D++R 
Sbjct: 121 VMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVID--GKIVGLISMVDVVRA 171



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+     G    +      DVM     +  V  G  +I A+ ++SE     V V+D 
Sbjct: 98  TERDYMKKIIGAGRSSKLTKVGDVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVID- 156

Query: 260 GQKLKGIITEGDIFRNF 276
             K+ G+I+  D+ R  
Sbjct: 157 -GKIVGLISMVDVVRAI 172


>gi|254417912|ref|ZP_05031636.1| hypothetical protein BBAL3_222 [Brevundimonas sp. BAL3]
 gi|196184089|gb|EDX79065.1| hypothetical protein BBAL3_222 [Brevundimonas sp. BAL3]
          Length = 135

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               + L + G  L +    +++  FG V V D G +L G IT+ DI           + 
Sbjct: 7   MTKDVHLARPGDTLQEVAARMAKGDFGFVPVAD-GDQLIGAITDRDIVVRALAAGAAPSA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V + + ++P+ +L+   L   + L+    I    VVD   + +G++   DL
Sbjct: 66  PVVEYITRDPQTVLDTDDLKSVLDLMGSRQIRRAPVVDKHGRIVGVISLGDL 117



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + DVM K+  +      L      + + +   + V D  Q  IG +   D++
Sbjct: 1   MKIRDVMTKDVHLARPGDTLQEVAARMAKGDFGFVPVADGDQ-LIGAITDRDIV 53



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/66 (16%), Positives = 27/66 (40%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V +       V     L   + ++  ++     VVD+  ++ G+I+ GD+     +    
Sbjct: 68  VEYITRDPQTVLDTDDLKSVLDLMGSRQIRRAPVVDKHGRIVGVISLGDLSTRVKEKYAG 127

Query: 283 LSVEDV 288
            ++E +
Sbjct: 128 ETLESI 133


>gi|91782377|ref|YP_557583.1| glucokinase [Burkholderia xenovorans LB400]
 gi|296162226|ref|ZP_06845021.1| glucokinase [Burkholderia sp. Ch1-1]
 gi|119370100|sp|Q143F8|GLK_BURXL RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|91686331|gb|ABE29531.1| glucokinase [Burkholderia xenovorans LB400]
 gi|295887493|gb|EFG67316.1| glucokinase [Burkholderia sp. Ch1-1]
          Length = 638

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/195 (17%), Positives = 67/195 (34%), Gaps = 7/195 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESRNFSENDFY 205
           + +   R     D  
Sbjct: 593 VGVAIRRAVPSADVA 607


>gi|259418480|ref|ZP_05742398.1| CBS domain protein [Silicibacter sp. TrichCH4B]
 gi|259345875|gb|EEW57719.1| CBS domain protein [Silicibacter sp. TrichCH4B]
          Length = 174

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDV 288
            +     +  A+ +L +K  G + V +   +L GI++E DI R            +VE +
Sbjct: 48  WINPQDTVAKAVEVLRDKGIGALLVKNPQGELVGILSERDIVRRLADTPGETLPQTVEGL 107

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +      D  +   ++L+       + V+ + ++ +G++   D++
Sbjct: 108 MSTDVITATPDQSVVEVLRLMTDGRFRHMPVL-EQEQLVGMITIGDVV 154



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 22/42 (52%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           I     +  A+++LR   I  L+V +   + +GI+   D++R
Sbjct: 49  INPQDTVAKAVEVLRDKGIGALLVKNPQGELVGILSERDIVR 90


>gi|160903130|ref|YP_001568711.1| CBS domain-containing protein [Petrotoga mobilis SJ95]
 gi|160360774|gb|ABX32388.1| CBS domain containing protein [Petrotoga mobilis SJ95]
          Length = 885

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 2/101 (1%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            +  A  ++ +     + V+ +  KL GI+T+ DI +     L    V+ +M  N KV+ 
Sbjct: 335 TVEIAHELMFQTGHSGLPVISDN-KLVGIVTKKDIEKAMKHGLKNAPVKAIMSTNLKVVD 393

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +T LT   +++ + +I  + V+      +GI+   DLLR 
Sbjct: 394 VETSLTQVRRIMAEADIGRIPVL-KDGILVGIITRTDLLRA 433



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  + +M    + IL    + +A +L+ Q   S L V+ D  K +GIV   D+ + 
Sbjct: 317 LKAKHIMSSPVRTILSFETVEIAHELMFQTGHSGLPVISD-NKLVGIVTKKDIEKA 371


>gi|325971923|ref|YP_004248114.1| hypothetical protein SpiBuddy_2099 [Spirochaeta sp. Buddy]
 gi|324027161|gb|ADY13920.1| CBS domain containing membrane protein [Spirochaeta sp. Buddy]
          Length = 214

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 58/127 (45%), Gaps = 13/127 (10%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------- 275
                +         + +A  ++ +++   + V+D+ +KL GIITE DI           
Sbjct: 5   RRMTRNPVTATPDMSIAEASALMKQEKVHRLPVLDKEKKLVGIITEKDILYATPSPASSL 64

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   L+ L+V+ +M KN   I +DT +  A +++   ++S L V+ +  K IGIV 
Sbjct: 65  SIHEMAYLLSKLTVKKLMSKNVVTINKDTTVEEAARMMVDQDLSSLPVL-EGDKLIGIVT 123

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 124 KSDMFKI 130


>gi|162148241|ref|YP_001602702.1| cystathionine-beta-synthase [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161786818|emb|CAP56401.1| putative cystathionine-beta-synthase [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 167

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 209 PGGKLGTLFVCASDVM---HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           P G  G   + AS +      G  +  V+    + D   +LS++R G V V+D    L G
Sbjct: 9   PIGDAGGCIMTASVLQVLDRKGHHVTTVREDMNVADVARLLSDRRIGGVPVLDAAGVLVG 68

Query: 266 IITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           +++E  +     +   D   L  EDVM++N      D  +    + +       + V+ +
Sbjct: 69  LVSERALVGALSRYGADFARLRAEDVMMRNVPTTSLDEDIVAVARRMTGRRARHVPVL-E 127

Query: 323 CQKAIGIVHFLDLLRFGI 340
               +G+V   DL++F I
Sbjct: 128 NGAVVGLVSIGDLVKFRI 145


>gi|148642235|ref|YP_001272748.1| homoserine O-acetyltransferase, MetX [Methanobrevibacter smithii
           ATCC 35061]
 gi|148551252|gb|ABQ86380.1| homoserine O-acetyltransferase, MetX [Methanobrevibacter smithii
           ATCC 35061]
          Length = 491

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  ++       + VV  G+KL GI+T  D+ +    + N L  
Sbjct: 376 MITDVVTITEQAQIEEAAKLMFNLNVTHIPVVTNGKKLIGIVTSWDLSKAIATNSNDL-- 433

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +++M K  K    D  +    + +R+ +IS L VVDD  K  GI+ 
Sbjct: 434 KEIMTKTVKFCHADDSIESTARRMRKLDISCLPVVDDDFKLKGIIS 479



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 22/69 (31%), Positives = 35/69 (50%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G +     K L+   VED+MI +   I E   +  A +L+   N++ + VV + +K IGI
Sbjct: 357 GQLNYILSKFLSDNIVEDLMITDVVTITEQAQIEEAAKLMFNLNVTHIPVVTNGKKLIGI 416

Query: 330 VHFLDLLRF 338
           V   DL + 
Sbjct: 417 VTSWDLSKA 425


>gi|332362303|gb|EGJ40103.1| CBS domain protein [Streptococcus sanguinis SK1056]
          Length = 218

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|256545929|ref|ZP_05473284.1| phosphosugar-binding transcriptional regulator [Anaerococcus
           vaginalis ATCC 51170]
 gi|256398351|gb|EEU11973.1| phosphosugar-binding transcriptional regulator [Anaerococcus
           vaginalis ATCC 51170]
          Length = 279

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 74/194 (38%), Gaps = 12/194 (6%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELS--------FQFHC 55
            F   K    K      +       +S    K  ++  ++++Q  +          +   
Sbjct: 62  SFVDMKISIAKAFEEESDFIEDEIKKS-DKTKDIINKSKANIQKTIEKTYALIDEEKIEK 120

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A + +   K ++ ++G+  SG I       L   G   ++   A  +   +  I ++DL+
Sbjct: 121 ACQILNKAK-KIYLSGVAGSGLICEDFYYKLLRAGADVYYEKDAHTNLSRISHIGKNDLL 179

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +++   + E+     YA+     LI+I+    S +A  +D+ + +P   +   +G   
Sbjct: 180 IAITYGAKTKEVLESFNYAKIKGASLISISKNENSKLAKDSDVFIKIPSSEKEIRYGAI- 238

Query: 176 TTSAIMQLAIGDAL 189
             S    L I D L
Sbjct: 239 -ASRFSSLIITDIL 251


>gi|125718523|ref|YP_001035656.1| hypothetical protein [Streptococcus sanguinis SK36]
 gi|125498440|gb|ABN45106.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
          Length = 218

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|25011667|ref|NP_736062.1| hypothetical protein gbs1627 [Streptococcus agalactiae NEM316]
 gi|77414837|ref|ZP_00790953.1| AcuB family protein [Streptococcus agalactiae 515]
 gi|24413207|emb|CAD47286.1| Unknown [Streptococcus agalactiae NEM316]
 gi|77159114|gb|EAO70309.1| AcuB family protein [Streptococcus agalactiae 515]
          Length = 219

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     + +A  +L E     + VV E  +L G++TEG +                +  L
Sbjct: 14  VSPDTTVAEAADLLREHHLRRLPVV-ENDQLLGLVTEGTMAEAQPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK+   + +   L  A+ L+    I VL VVD+  +  GI+   D+ + 
Sbjct: 73  NKTKIRDIMIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVDN-GQLYGIITDRDVFKA 129



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D M K    +  DT +  A  LLR+H++  L VV++ Q  +G+V 
Sbjct: 1   MPVKDFMTKKLVYVSPDTTVAEAADLLREHHLRRLPVVENDQ-LLGLVT 48



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V     L DAI ++  ++ G + VVD   +L GIIT+ D+F+ F
Sbjct: 81  MIKDIVTVSQYASLEDAIYLMMSRKIGVLPVVD-NGQLYGIITDRDVFKAF 130


>gi|42779868|ref|NP_977115.1| CBS domain-containing protein [Bacillus cereus ATCC 10987]
 gi|42735785|gb|AAS39723.1| CBS domain protein [Bacillus cereus ATCC 10987]
          Length = 139

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDPIEKATELMAQYQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|329888195|ref|ZP_08266793.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
 gi|328846751|gb|EGF96313.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
          Length = 138

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + + +    L +    ++   FG + V D G +L G +T+ DI  R          
Sbjct: 9   MSKDVQVARPEDTLHNVAGRMAAGDFGFIPVAD-GDRLIGALTDRDIVVRAVASGAGPEA 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V DV+ ++  V+  D  L VA+ L+    I  L VVD   + +G+V   DL
Sbjct: 68  RVLDVLSRDALVVRADDDLKVALDLMSSRQIRRLPVVDKDGRLVGVVSLGDL 119



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 31/57 (54%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +V+    L  A+ ++S ++   + VVD+  +L G+++ GD+     +     ++E++
Sbjct: 79  VVRADDDLKVALDLMSSRQIRRLPVVDKDGRLVGVVSLGDLSTRVKERYAGEALEEI 135


>gi|303240159|ref|ZP_07326679.1| Nucleotidyl transferase [Acetivibrio cellulolyticus CD2]
 gi|302592250|gb|EFL61978.1| Nucleotidyl transferase [Acetivibrio cellulolyticus CD2]
          Length = 360

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
              +  LV +   + +A+ ++     G V VVDE + L+G +T+GDI R     KDL  L
Sbjct: 6   MKVNNILVGMDETIKNAMQVMDAGAMGIVLVVDENKMLRGTVTDGDIRRAILSGKDL-DL 64

Query: 284 SVEDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++M      + E  L     + +     I  L V++  ++  GI    DL
Sbjct: 65  QIHNIMQAGFTYVTEKQLNRQQILGIFDSKKIKQLPVLNQKKQPTGIYLMEDL 117


>gi|294677452|ref|YP_003578067.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter capsulatus SB
           1003]
 gi|294476272|gb|ADE85660.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter capsulatus SB
           1003]
          Length = 482

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 63/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEANMAIAMAQAGGMGVIHRNLTVEKQASEVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +          VVD   K+ GI+T  D+        +   V  +M 
Sbjct: 99  T---PEQTLADAKALRERYNVSGFPVVDVAGKVVGIVTNRDMRFATD---DATPVHAMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + N  ++ E      AM L++   I  L+VV+   K  G++   D
Sbjct: 153 RENLAMLREPADRDEAMSLMKARRIEKLLVVNADGKLTGLLTLKD 197



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  +  L  A  L  ++N+S   VVD   K +GIV   D+
Sbjct: 94  NPITLTPEQTLADAKALRERYNVSGFPVVDVAGKVVGIVTNRDM 137


>gi|229825175|ref|ZP_04451244.1| hypothetical protein GCWU000182_00526 [Abiotrophia defectiva ATCC
           49176]
 gi|229790547|gb|EEP26661.1| hypothetical protein GCWU000182_00526 [Abiotrophia defectiva ATCC
           49176]
          Length = 484

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 41  KIPMMSAGMDTVTESRMAIAMARHGGIG-----VIHKNMSIERQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFFLSPEHTLADANNVMAKYRISGVPIT-EGRKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L       L +VD      G++   D+
Sbjct: 153 TSEGLVTAREGITLEEAKKVLASARKEKLPIVDAEGNLKGLITIKDI 199


>gi|222111014|ref|YP_002553278.1| cbs domain-containing protein [Acidovorax ebreus TPSY]
 gi|221730458|gb|ACM33278.1| CBS domain containing protein [Acidovorax ebreus TPSY]
          Length = 157

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMIKNP 293
               L  A   + E   G + V D G++L G++T+ D + R   ++     + +VM +  
Sbjct: 17  PDDTLTTAAQAMRELNVGALPVCD-GERLVGMVTDRDMVLRGLAEERTHSRLNEVMSREV 75

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               ED  +  A+  +R   +  L VVD  Q+ +GIV   D
Sbjct: 76  YYCYEDQPVDEAIASMRDMQVRRLPVVDRDQRLVGIVSLGD 116



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V DVM +  + +  D  LT A Q +R+ N+  L V D  ++ +G+V   D++  G+
Sbjct: 4   VSDVMTRGIRTMAPDDTLTTAAQAMRELNVGALPVCD-GERLVGMVTDRDMVLRGL 58



 Score = 43.3 bits (101), Expect = 0.055,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 30/63 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +       P+ +AI  + + +   + VVD  Q+L GI++ GD+  N  +  +  ++
Sbjct: 71  MSREVYYCYEDQPVDEAIASMRDMQVRRLPVVDRDQRLVGIVSLGDVATNVDERQSGTAI 130

Query: 286 EDV 288
            D+
Sbjct: 131 RDI 133


>gi|209693784|ref|YP_002261712.1| nucleotidyl transferase [Aliivibrio salmonicida LFI1238]
 gi|209693865|ref|YP_002261793.1| nucleotidyl transferase [Aliivibrio salmonicida LFI1238]
 gi|208007735|emb|CAQ77852.1| nucleotidyl transferase [Aliivibrio salmonicida LFI1238]
 gi|208007816|emb|CAQ77941.1| nucleotidyl transferase [Aliivibrio salmonicida LFI1238]
          Length = 352

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 53/112 (47%), Gaps = 2/112 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+K    ++DA+ ++  +      VV++ Q+L G++T+GDI R+   +L     V D
Sbjct: 6   KKVLIKPESTIVDALRVIDNESLRIALVVNDEQQLLGVVTDGDIRRSILNNLPLDTLVVD 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +M  +P     +T     ++L+    I  + ++++  K +G+     L    
Sbjct: 66  IMSCSPITASVNTAKEQLVKLMESEGILAIPLMEE-NKVVGLETLHHLFEEK 116


>gi|229016050|ref|ZP_04173004.1| CBS domain protein [Bacillus cereus AH1273]
 gi|229022272|ref|ZP_04178813.1| CBS domain protein [Bacillus cereus AH1272]
 gi|228739011|gb|EEL89466.1| CBS domain protein [Bacillus cereus AH1272]
 gi|228745199|gb|EEL95247.1| CBS domain protein [Bacillus cereus AH1273]
          Length = 147

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 54/126 (42%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K     +       S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEETKMTRVRDFMSTHVVHCTPLD-NVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + ++M  N   +  D  +  A +L+ Q+ I  L VV +  + +G+
Sbjct: 61  LVVRGIAEKHPGSNKITNIMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-ESGQLVGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDFMSTHVVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 66


>gi|15802958|ref|NP_288988.1| hypothetical protein Z3692 [Escherichia coli O157:H7 EDL933]
 gi|15832552|ref|NP_311325.1| hypothetical protein ECs3298 [Escherichia coli O157:H7 str. Sakai]
 gi|168748516|ref|ZP_02773538.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|168756197|ref|ZP_02781204.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|168761035|ref|ZP_02786042.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|168768518|ref|ZP_02793525.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|168773661|ref|ZP_02798668.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|168778392|ref|ZP_02803399.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|168787773|ref|ZP_02812780.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|168798797|ref|ZP_02823804.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|195936578|ref|ZP_03081960.1| hypothetical protein EscherichcoliO157_08970 [Escherichia coli
           O157:H7 str. EC4024]
 gi|208805749|ref|ZP_03248086.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208814123|ref|ZP_03255452.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208821482|ref|ZP_03261802.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209397005|ref|YP_002271904.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|217327225|ref|ZP_03443308.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|254794380|ref|YP_003079217.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|261223131|ref|ZP_05937412.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261259316|ref|ZP_05951849.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283655|ref|YP_003500473.1| hypothetical protein G2583_2958 [Escherichia coli O55:H7 str.
           CB9615]
 gi|81765681|sp|Q8XBJ3|MURR_ECO57 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504580|sp|B5YZX2|MURR_ECO5E RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|263504593|sp|C6UQ16|MURR_ECO5T RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|12516802|gb|AAG57545.1|AE005472_12 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13362768|dbj|BAB36721.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|187770686|gb|EDU34530.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|188017029|gb|EDU55151.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|189003581|gb|EDU72567.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|189356595|gb|EDU75014.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4401]
 gi|189362300|gb|EDU80719.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|189368470|gb|EDU86886.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|189372358|gb|EDU90774.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|189378617|gb|EDU97033.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|208725550|gb|EDZ75151.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208735400|gb|EDZ84087.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|208741605|gb|EDZ89287.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4042]
 gi|209158405|gb|ACI35838.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209764098|gb|ACI80361.1| hypothetical protein ECs3298 [Escherichia coli]
 gi|209764100|gb|ACI80362.1| hypothetical protein ECs3298 [Escherichia coli]
 gi|209764102|gb|ACI80363.1| hypothetical protein ECs3298 [Escherichia coli]
 gi|209764104|gb|ACI80364.1| hypothetical protein ECs3298 [Escherichia coli]
 gi|209764106|gb|ACI80365.1| hypothetical protein ECs3298 [Escherichia coli]
 gi|217319592|gb|EEC28017.1| transcriptional regulator, RpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|254593780|gb|ACT73141.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|290763528|gb|ADD57489.1| hypothetical protein G2583_2958 [Escherichia coli O55:H7 str.
           CB9615]
 gi|320188767|gb|EFW63426.1| Sialic acid utilization regulator, RpiR family [Escherichia coli
           O157:H7 str. EC1212]
 gi|320640940|gb|EFX10424.1| transcriptional regulator MurR [Escherichia coli O157:H7 str.
           G5101]
 gi|320646221|gb|EFX15148.1| transcriptional regulator MurR [Escherichia coli O157:H- str.
           493-89]
 gi|320651727|gb|EFX20107.1| transcriptional regulator MurR [Escherichia coli O157:H- str. H
           2687]
 gi|320657112|gb|EFX24921.1| transcriptional regulator MurR [Escherichia coli O55:H7 str.
           3256-97 TW 07815]
 gi|320662872|gb|EFX30200.1| transcriptional regulator MurR [Escherichia coli O55:H7 str. USDA
           5905]
 gi|320667758|gb|EFX34669.1| transcriptional regulator MurR [Escherichia coli O157:H7 str.
           LSU-61]
 gi|326340230|gb|EGD64034.1| Sialic acid utilization regulator, RpiR family [Escherichia coli
           O157:H7 str. 1125]
 gi|326344915|gb|EGD68659.1| Sialic acid utilization regulator, RpiR family [Escherichia coli
           O157:H7 str. 1044]
          Length = 285

 Score = 80.3 bits (197), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDYARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGCDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSPLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|303249048|ref|ZP_07335292.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
 gi|302489571|gb|EFL49512.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
          Length = 130

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 51/115 (44%), Gaps = 1/115 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    L DAI ++ E     + + D   +L G++T+ D+    +K     ++
Sbjct: 7   MTSQLRCLRESDSLADAIALMQELFVRHIPITDADGQLAGLVTQRDLLSLENKKDPVTAL 66

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            DVM  +   +  DT L  A + +  +    L VV +  + +GI+   D L+  I
Sbjct: 67  RDVMCTDLVTVAPDTSLRAAAETMIYNKFGCLPVV-EDGRLVGIITETDFLKLAI 120



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M    + + E   L  A+ L+++  +  + + D   +  G+V   DLL
Sbjct: 3   VADLMTSQLRCLRESDSLADAIALMQELFVRHIPITDADGQLAGLVTQRDLL 54


>gi|300691578|ref|YP_003752573.1| inosine-5'-monophosphate dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
 gi|299078638|emb|CBJ51296.1| inosine-5'-monophosphate dehydrogenase oxidoreductase [Ralstonia
           solanacearum PSI07]
          Length = 487

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGNKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A +L+ +H +  ++VVD   +  G++   D+ + 
Sbjct: 152 TPGEKLVTVKEGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKA 202


>gi|297617382|ref|YP_003702541.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family [Syntrophothermus lipocalidus DSM 12680]
 gi|297145219|gb|ADI01976.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family [Syntrophothermus lipocalidus DSM 12680]
          Length = 597

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKN 292
                L   I  + + R+  V VV+   KL G++T+  + R     L     + DV  +N
Sbjct: 23  SPDETLEQVIAAMLQNRWEEVVVVEGNGKLLGLVTKEHLVRILSDGLPQDKPIIDVCHRN 82

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                    L +A  ++R+H+I  L V+D+    +GI+   D
Sbjct: 83  VFTTTTTEDLVLARDVMREHHIGRLPVLDETGTVVGILTAKD 124



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ L V + M K       D  L   +  + Q+    ++VV+   K +G+V    L+R 
Sbjct: 6   ISELQVGEAMTKRFGTASPDETLEQVIAAMLQNRWEEVVVVEGNGKLLGLVTKEHLVRI 64



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 53/163 (32%), Gaps = 54/163 (33%)

Query: 229 SIPLVKIGCPLID---AITILSEKRFGCVAVVDEGQKLKGIITEGD-----------IFR 274
               V       D   A  ++ E   G + V+DE   + GI+T  D           I R
Sbjct: 79  CHRNVFTTTTTEDLVLARDVMREHHIGRLPVLDETGTVVGILTAKDVCNGFSDKLEVIGR 138

Query: 275 NF--------------------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAM-- 306
           +                            + +  L  +DV+ K  K I +D L+   +  
Sbjct: 139 HMQAVMDNITEAIQVVDCFGVITYWNKAAERMFGLKADDVVGKRLKEIYDDGLIESVLKE 198

Query: 307 -----QLL-----RQHNI-SVLMVVDDCQKAIGIV-HFLDLLR 337
                 +L     +Q+ I + + V+      IG+V    D+ +
Sbjct: 199 AKSRRNVLAELKPQQYAIRNAVPVITPAGDVIGVVCTTQDVTQ 241


>gi|160893899|ref|ZP_02074678.1| hypothetical protein CLOL250_01453 [Clostridium sp. L2-50]
 gi|156864277|gb|EDO57708.1| hypothetical protein CLOL250_01453 [Clostridium sp. L2-50]
          Length = 483

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            V+H    +         V  S + +  
Sbjct: 41  QIPLMSAGMDTVTEHRMAIAMARQGGIG-----VIHKNMSIEEQAEEVDKVKRSENGVIS 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  E  KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPEHTLADANALMAKFRISGVPIT-EDGKLVGIITNRDLM--FEEDYSKKISESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VDD  +  G++   D+
Sbjct: 153 TSEGLITAKEGITLPEAKKILAKARKEKLPIVDDDFRLKGLITIKDI 199



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P  +  +  L  A  L+ +  IS + +  +  K +GI+   DL+
Sbjct: 96  DPFYLSPEHTLADANALMAKFRISGVPIT-EDGKLVGIITNRDLM 139


>gi|108761293|ref|YP_632411.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108465173|gb|ABF90358.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 143

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 6/110 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV-----EDV 288
           K    L  A  +L   R   + VV   +KL G+IT  D+ R         +       D+
Sbjct: 16  KETQNLAKADELLRLHRIRHLPVV-RQEKLVGLITHRDLLRAAATHATDPAAQPLWAADI 74

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M ++ + +  DT L  A+ L+ +H    L VVD+     GI+   DL+R+
Sbjct: 75  MTRDVQTVRPDTPLRRAVTLMLEHKYGCLPVVDEGGVLQGILTEADLVRY 124



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M ++   + E   L  A +LLR H I  L VV   +K +G++   DLLR 
Sbjct: 4   VGELMTRDVVTLKETQNLAKADELLRLHRIRHLPVV-RQEKLVGLITHRDLLRA 56



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 20/49 (40%), Positives = 31/49 (63%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               +  V+   PL  A+T++ E ++GC+ VVDEG  L+GI+TE D+ R
Sbjct: 75  MTRDVQTVRPDTPLRRAVTLMLEHKYGCLPVVDEGGVLQGILTEADLVR 123


>gi|70606937|ref|YP_255807.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68567585|gb|AAY80514.1| conserved Archaeal CBS domain protein [Sulfolobus acidocaldarius
           DSM 639]
          Length = 160

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 1/107 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +V+    L+ A   +     G + VV+E +++ GIITE D+ + F       +V D M +
Sbjct: 15  VVRENDSLLRATREMRNHNIGALVVVNENEEVVGIITERDVVKAFADGNFDATVGDYMSR 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             K +   T +  A++ +  +    L VV +  K  GIV   DL++ 
Sbjct: 75  EVKGVKIGTDIYTALKTMVDNGFRHLPVV-EGDKVHGIVSIRDLVKA 120


>gi|258591739|emb|CBE68040.1| conserved protein of unknown function [NC10 bacterium 'Dutch
           sediment']
          Length = 138

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  V     L  A  +L +     + V+D G++L GI+T+ D+ +           
Sbjct: 8   MNRKLITVDTRTSLYQAQRVLDQHHIRHLFVMD-GKRLVGIVTDRDLRKAAPSSKSPLTI 66

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               + ++ L V +VM +        T    A +++ +  I  L VV +    +GIV   
Sbjct: 67  HEREEFMDELKVVEVMSRKLITASPTTTAREAAKVMVRGKIGCLPVV-EGNTLVGIVTET 125

Query: 334 DLLRF 338
           DLL  
Sbjct: 126 DLLEI 130



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + ++M +    +   T L  A ++L QH+I  L V+D  ++ +GIV   DL + 
Sbjct: 2   TQLSEIMNRKLITVDTRTSLYQAQRVLDQHHIRHLFVMD-GKRLVGIVTDRDLRKA 56



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                  +A  ++   + GC+ VV EG  L GI+TE D+     + 
Sbjct: 90  SPTTTAREAAKVMVRGKIGCLPVV-EGNTLVGIVTETDLLEILVRG 134


>gi|283782030|ref|YP_003372785.1| inosine-5'-monophosphate dehydrogenase [Pirellula staleyi DSM 6068]
 gi|283440483|gb|ADB18925.1| inosine-5'-monophosphate dehydrogenase [Pirellula staleyi DSM 6068]
          Length = 494

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 13/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL +          ++H    +       + V  S + I +
Sbjct: 42  NIPMISSPMDTVTEHQMAIALAKEGGLG-----IIHKNMSIEQQAEEVAKVKRSANGIIV 96

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                    P+  A  ++ +K      +  E  +L GI+T  D+ R          + +V
Sbjct: 97  DPVTLRPSDPVSKAQQLMGQKNVSGFPITSEDGRLCGILTRRDL-RFLENG--EQPISEV 153

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +       +  L  A ++L    +  L++VDD     G++   D+
Sbjct: 154 MTGEGLVTATGNVTLEQAEKILTAKKVEKLLLVDDSYCLTGMITIRDI 201


>gi|84500150|ref|ZP_00998416.1| CBS [Oceanicola batsensis HTCC2597]
 gi|84392084|gb|EAQ04352.1| CBS [Oceanicola batsensis HTCC2597]
          Length = 142

 Score = 79.9 bits (196), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
             ++        + DA  IL E   G + V+D G KL GI++E D+ R      +D +  
Sbjct: 12  NRTLRHATPDMTVRDACRILDEHAIGALPVLD-GGKLLGILSERDVIRRVIVRDRDPSAT 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM   P  I     L  AM  +       L V     + +G++   D+
Sbjct: 71  KVSEVMTPEPLTISAQGTLATAMGKMLDGGFRHLPVT-RANEVVGMLSMRDI 121



 Score = 43.7 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 2/60 (3%)

Query: 283 LSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            S+ +++  +  +    D  +  A ++L +H I  L V+D   K +GI+   D++R  I+
Sbjct: 4   QSISEIIRNRTLRHATPDMTVRDACRILDEHAIGALPVLD-GGKLLGILSERDVIRRVIV 62


>gi|83309184|ref|YP_419448.1| nucleoside-diphosphate-sugar pyrophosphorylase [Magnetospirillum
           magneticum AMB-1]
 gi|82944025|dbj|BAE48889.1| Nucleoside-diphosphate-sugar pyrophosphorylase [Magnetospirillum
           magneticum AMB-1]
          Length = 349

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 1/100 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVM 289
            LV    P++DAI  L       V VVD   +L G IT+GDI R   + L       +VM
Sbjct: 7   TLVSPTTPVLDAIKALDLGAMQIVLVVDGQSRLLGTITDGDIRRGLLRGLPLESPASEVM 66

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                    +    V +  +R+  IS + ++D   + +G+
Sbjct: 67  NPRFHHGRVEDEAGVLLATMRRLQISQMPLLDGDGRVVGL 106


>gi|300245685|gb|ADJ93900.1| putative phenylphosphate synthetase stimulating protein [Clostridia
           bacterium enrichment culture clone BF]
          Length = 199

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTL 283
                +  +     L +A  ++ +     + VV E ++L G ITE D+ + +F      +
Sbjct: 6   CMQKDLITIGKDALLQEAGALMKKHSIRHLPVV-EDEQLVGFITESDLRQYSFPSREKDI 64

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V +VM+ NP  +  +  +  A +L+  + I  L V+D  +K +GI+  +DLL  
Sbjct: 65  HVHEVMVLNPITVNINASIEKAARLIHDYKIGGLPVLDK-KKLVGIITAIDLLSA 118



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V++ M K+   I +D LL  A  L+++H+I  L VV+D Q  +G +   DL
Sbjct: 1   MKVKNCMQKDLITIGKDALLQEAGALMKKHSIRHLPVVEDEQ-LVGFITESDL 52



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +             +   V I   +  A  ++ + + G + V+D+  KL GIIT  D+  
Sbjct: 59  SREKDIHVHEVMVLNPITVNINASIEKAARLIHDYKIGGLPVLDKK-KLVGIITAIDLLS 117

Query: 275 NF 276
            F
Sbjct: 118 AF 119


>gi|161524458|ref|YP_001579470.1| inosine 5'-monophosphate dehydrogenase [Burkholderia multivorans
           ATCC 17616]
 gi|189350787|ref|YP_001946415.1| inosine 5'-monophosphate dehydrogenase [Burkholderia multivorans
           ATCC 17616]
 gi|221198293|ref|ZP_03571339.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD2M]
 gi|221208232|ref|ZP_03581236.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD2]
 gi|221215485|ref|ZP_03588449.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD1]
 gi|160341887|gb|ABX14973.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           ATCC 17616]
 gi|189334809|dbj|BAG43879.1| IMP dehydrogenase [Burkholderia multivorans ATCC 17616]
 gi|221164669|gb|EED97151.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD1]
 gi|221171880|gb|EEE04323.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD2]
 gi|221182225|gb|EEE14626.1| inosine-5'-monophosphate dehydrogenase [Burkholderia multivorans
           CGD2M]
          Length = 486

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|91773827|ref|YP_566519.1| hypothetical protein Mbur_1886 [Methanococcoides burtonii DSM 6242]
 gi|91712842|gb|ABE52769.1| Cystathionine-beta-synthase and DUF293 domains-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 291

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    + +A  I    +     V ++  K+ G++T  DI         TL ++D+M KN
Sbjct: 184 VEPNYTIQEAARIFITNKIHGAPV-EDNGKIVGMVTFMDIGETLASGKMTLKIKDIMTKN 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              I  D+ L+ A+ L  +HNI  L+V  D     G++   D+L   +I
Sbjct: 243 VITIDGDSSLSDAVHLFNEHNIGRLIVTID-GIPRGMISKTDVLHELVI 290



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L   SV+  + K+   +  +  +  A ++   + I    V +D  K +G+V F+D+
Sbjct: 168 LPKKSVKHYIKKDTISVEPNYTIQEAARIFITNKIHGAPV-EDNGKIVGMVTFMDI 222


>gi|146277199|ref|YP_001167358.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           ATCC 17025]
 gi|145555440|gb|ABP70053.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           ATCC 17025]
          Length = 482

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEGRMAIAMAQAGGIGVIHRNLGIEEQAREVSRVKRFESGIVYAPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +          VVDEG ++ GI+T  D+      + +   V  +M 
Sbjct: 99  ---RPDQTLADAKALQERYNVTGFPVVDEGGRVVGIVTNRDMRFA---NDDRTPVRVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   IL++      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SDNLAILQEPADRDTAISLMKARRIEKLLVTDGQGKLTGLLTLKD 197



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +  D  L  A  L  ++N++   VVD+  + +GIV   D+
Sbjct: 95  PITLRPDQTLADAKALQERYNVTGFPVVDEGGRVVGIVTNRDM 137


>gi|300704206|ref|YP_003745809.1| inosine-5'-monophosphate dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
 gi|299071870|emb|CBJ43199.1| inosine-5'-monophosphate dehydrogenase oxidoreductase [Ralstonia
           solanacearum CFBP2957]
          Length = 487

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGNKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A +L+ +H +  ++VVD   +  G++   D+ + 
Sbjct: 152 TPGEKLVTVKEGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKA 202


>gi|262404940|ref|ZP_06081492.1| transcriptional regulator RpiR family [Vibrio sp. RC586]
 gi|262348779|gb|EEY97920.1| transcriptional regulator RpiR family [Vibrio sp. RC586]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTDAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|149201057|ref|ZP_01878032.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseovarius sp. TM1035]
 gi|149145390|gb|EDM33416.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Roseovarius sp. TM1035]
          Length = 612

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 9/141 (6%)

Query: 204 FYVLHPG-----GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F    P      G   T             +         + D   ++ +     V VV 
Sbjct: 126 FARARPTAQGDDGPYATGLTALQVSDLMTATPITCTPDATVKDVARLMRDNVISSV-VVM 184

Query: 259 EGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           EG +L GIIT  D+  +   + L   + V  VM  +P  I    L   A+ LL +  ++ 
Sbjct: 185 EGARLAGIITVRDLANKVLAEGLGGDIRVAQVMTPDPVTIEPGRLGLDALMLLSELKVNH 244

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V     + +G++   DL R
Sbjct: 245 LPVA-QGGRVLGMIGKTDLFR 264


>gi|90021106|ref|YP_526933.1| inosine-5'-monophosphate dehydrogenase [Saccharophagus degradans
           2-40]
 gi|89950706|gb|ABD80721.1| inosine-5'-monophosphate dehydrogenase [Saccharophagus degradans
           2-40]
          Length = 556

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 63/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 106 NIPLLSAAMDTVTEARLAIALAQEGGIG-----IIHKSMTIEKQAEQVRAVKKFEAGVVK 160

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +   C + D I +  +     V V+D    L GI+T  D+   F  +L   +V  +
Sbjct: 161 NPITIDSSCSIKDLIALTRQHNISGVPVLD-NGDLVGIVTGRDVR--FETNL-DATVASI 216

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        +LE T       LL +H I  ++VV+D  K  G++   D+ + 
Sbjct: 217 MTPKEKLVTVLEGTAADEVRALLHKHRIEKVLVVNDKFKLCGLITVKDINKA 268


>gi|329938565|ref|ZP_08287990.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
 gi|329302538|gb|EGG46429.1| hypothetical protein SGM_3482 [Streptomyces griseoaurantiacus M045]
          Length = 219

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 51/130 (39%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              +   V    P  D +T++ E +   + V++   ++ G+++E D+      R+   D 
Sbjct: 11  MTHTAVAVGRDAPFKDIVTLMQEWKVSALPVLEGEGRVVGVVSEADLLLKEEFRDSDPDR 70

Query: 281 NT-------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T             L+  DVM      +     L  A +++ +  +  L VV+      
Sbjct: 71  LTQLRRLPDLAKAGALTAADVMTAPAVTVHPGATLGEAARIMARRRVKRLPVVNAEGILE 130

Query: 328 GIVHFLDLLR 337
           G+V   DLL+
Sbjct: 131 GVVSRADLLK 140



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V  G  L +A  I++ +R   + VV+    L+G+++  D+ + F +    L  
Sbjct: 92  MTAPAVTVHPGATLGEAARIMARRRVKRLPVVNAEGILEGVVSRADLLKVFLRTDEEL-A 150

Query: 286 EDV 288
           E+V
Sbjct: 151 EEV 153


>gi|327462982|gb|EGF09303.1| CBS domain protein [Streptococcus sanguinis SK1]
 gi|327474585|gb|EGF19990.1| CBS domain protein [Streptococcus sanguinis SK408]
 gi|327490143|gb|EGF21931.1| CBS domain protein [Streptococcus sanguinis SK1058]
          Length = 218

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|153830692|ref|ZP_01983359.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148873812|gb|EDL71947.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTDAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|13541493|ref|NP_111181.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
 gi|14324877|dbj|BAB59803.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 140

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 54/108 (50%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLN--TLSVEDVMI 290
           +      +A  ++++   G + V DE   ++G++TE D I +   KDLN   + VE++M 
Sbjct: 17  RPDTTAYEAAVVMAQDHVGFLIVEDETG-IRGMVTEWDYINKIISKDLNPKNVRVEEIMN 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                I  DT      +++ ++ I  L V++   K +G+V   D+LR 
Sbjct: 76  SPIISITPDTPTFKVAEIMSKNGIRRLPVMEK-NKLVGVVTSRDILRA 122



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      I  +    P      I+S+     + V+ E  KL G++T  DI R F  
Sbjct: 67  NVRVEEIMNSPIISITPDTPTFKVAEIMSKNGIRRLPVM-EKNKLVGVVTSRDILRAFKD 125

Query: 279 DLNTLSVEDVMIK 291
            ++  S+ D++ +
Sbjct: 126 YMD--SISDIISR 136



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             D+M K  K    DT    A  ++ Q ++  L+V D+     G+V 
Sbjct: 5   ASDIMRKYTKTFRPDTTAYEAAVVMAQDHVGFLIVEDETG-IRGMVT 50


>gi|299535418|ref|ZP_07048740.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
 gi|298729179|gb|EFI69732.1| acetoin utilization protein [Lysinibacillus fusiformis ZC1]
          Length = 215

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/119 (25%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------H 277
             D    +     + +A+ ++ EK+   + VVD+ Q + G+ITE DI            +
Sbjct: 7   MNDKPYTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDIKEVLPSSLQDEPN 66

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +    VED+M+K+P +      +        +  I  L +V    K +GIV   DLL
Sbjct: 67  SPIFNAKVEDIMVKDPLIGHPLDFVEEVALTFYESKIGCLPIV-SGGKLVGIVTTTDLL 124



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M   P  +     +  A++L+R+  +  L VVDD Q  +G++   D+
Sbjct: 3   VEEIMNDKPYTLAPTNTVQEALKLMREKKVRHLPVVDDEQHVLGVITERDI 53


>gi|296532694|ref|ZP_06895384.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
 gi|296266977|gb|EFH12912.1| CBS domain protein [Roseomonas cervicalis ATCC 49957]
          Length = 145

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 6/110 (5%)

Query: 237 CPLIDAITI---LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
            PL DA  I   L++ R G V V D G  + GI++E DI R           L  E +M 
Sbjct: 18  APLDDAAAIARTLAQHRIGAVLVRDAGGAVLGIVSERDIARALAAHEEATARLRAEQLMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +    I   T +  A+ L+    +  L V+       G+V   DL++  I
Sbjct: 78  RVLHTITPATSIADALALMTDRRVRHLPVLARDGSLAGMVSIGDLVKQRI 127



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 8/61 (13%), Positives = 24/61 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                           +  +     + DA+ +++++R   + V+     L G+++ GD+ 
Sbjct: 64  EEATARLRAEQLMTRVLHTITPATSIADALALMTDRRVRHLPVLARDGSLAGMVSIGDLV 123

Query: 274 R 274
           +
Sbjct: 124 K 124



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 17/45 (37%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +          + L QH I  ++V D     +GIV   D+ R 
Sbjct: 15  VSVAPLDDAAAIARTLAQHRIGAVLVRDAGGAVLGIVSERDIARA 59


>gi|168180012|ref|ZP_02614676.1| transcriptional regulator, RpiR family [Clostridium botulinum NCTC
           2916]
 gi|182669138|gb|EDT81114.1| transcriptional regulator, RpiR family [Clostridium botulinum NCTC
           2916]
          Length = 281

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KMIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|148379321|ref|YP_001253862.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           ATCC 3502]
 gi|153932792|ref|YP_001383697.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           ATCC 19397]
 gi|148288805|emb|CAL82889.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium botulinum A str. ATCC 3502]
 gi|152928836|gb|ABS34336.1| transcriptional regulator, RpiR family [Clostridium botulinum A
           str. ATCC 19397]
          Length = 281

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTELDYIINYNDSIDSIINKLGN--KMIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|318041619|ref|ZP_07973575.1| CBS [Synechococcus sp. CB0101]
          Length = 144

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V    PL +A+ ++SE     + VVDE   L G +TE D+             
Sbjct: 1   MTTPVRSVSTTTPLQEAVKLMSEHHISGLPVVDESGALVGELTEQDLMVRESGFDAGPYV 60

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                        N+ K+++ +   +V ++M K+P     DT L  A + L   +   L 
Sbjct: 61  MLLDAVIYLRNPLNWDKEVHQVLGSTVGELMSKHPHHCSPDTQLPAAARQLHDRSTQRLF 120

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D   K +G++   D++R 
Sbjct: 121 VLDAANKPVGVLTRGDVVRA 140



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 18/53 (33%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                        L  A   L ++    + V+D   K  G++T GD+ R    
Sbjct: 91  MSKHPHHCSPDTQLPAAARQLHDRSTQRLFVLDAANKPVGVLTRGDVVRALAA 143


>gi|289665797|ref|ZP_06487378.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289671196|ref|ZP_06492271.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 485

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV++  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNNSFELRGLITVKDIQKK 203


>gi|296130422|ref|YP_003637672.1| inosine-5'-monophosphate dehydrogenase [Cellulomonas flavigena DSM
           20109]
 gi|296022237|gb|ADG75473.1| inosine-5'-monophosphate dehydrogenase [Cellulomonas flavigena DSM
           20109]
          Length = 507

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 58/170 (34%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  SA M       +A+A+            VLH    +         V  S      
Sbjct: 51  RVPLVSAAMDTVTESRMAVAMARQGGVG-----VLHRNLSIADQAHQVDVVKRSESGMVS 105

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L +   +    R   + VVD+  +L GIIT  D+      +  T  V D 
Sbjct: 106 DPVTVGPDATLAELDALCGTYRVSGLPVVDDDGRLVGIITNRDLRFVPPSEFATRRVRDE 165

Query: 289 MIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M   P V          A  LL +H +  L +VD+  K  G++   D ++
Sbjct: 166 MTSQPLVTAPVGIARADAAALLAKHKVEKLPLVDEQGKLAGLITVKDFVK 215


>gi|310825687|ref|YP_003958044.1| transcriptional regulator [Eubacterium limosum KIST612]
 gi|308737421|gb|ADO35081.1| transcriptional regulator [Eubacterium limosum KIST612]
          Length = 281

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/190 (21%), Positives = 69/190 (36%), Gaps = 6/190 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
              S T        +ST     + I      +S LE S+  +         E I   + R
Sbjct: 77  DSPSETINEEIAEGDSTSDIKRKVIKHTNTAVSDLEYSINQK---DIDQCAEMILNAR-R 132

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V   GIG S  +           G        +   +     +T +D++ V+S +G S E
Sbjct: 133 VTFFGIGASSAVAIDALHKFGKIGLNVNGFQDSHLMNIHCSHMTSEDVLFVVSHTGESVE 192

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +      A+     +I++TS + S +A  +D+ L          +      S I+QL I 
Sbjct: 193 VLNAASLAKENGAKIISLTSFSNSSLAKKSDVFL--SSSTNDKKYHSEAMASRIVQLVIV 250

Query: 187 DALAIALLES 196
           D L +++   
Sbjct: 251 DILYLSVFMQ 260


>gi|307728935|ref|YP_003906159.1| glucokinase [Burkholderia sp. CCGE1003]
 gi|307583470|gb|ADN56868.1| glucokinase [Burkholderia sp. CCGE1003]
          Length = 638

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESR 197
           + +   R
Sbjct: 593 VGVAIRR 599


>gi|262172702|ref|ZP_06040380.1| transcriptional regulator RpiR family [Vibrio mimicus MB-451]
 gi|261893778|gb|EEY39764.1| transcriptional regulator RpiR family [Vibrio mimicus MB-451]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+ +   +F  A+  I+    RV I G+G S   G  LA  
Sbjct: 98  IAQKLVQTKTDAMFHTSNALRFD---EFSEAINWIQQAV-RVQIIGLGGSALTGKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + I L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADESQHRSSAIASRTAQNVLTDLIFITLAQQRETSARQ 269


>gi|239826921|ref|YP_002949545.1| RpiR family transcriptional regulator [Geobacillus sp. WCH70]
 gi|239807214|gb|ACS24279.1| transcriptional regulator, RpiR family [Geobacillus sp. WCH70]
          Length = 286

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 7/165 (4%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + +  +++      +   A E I   K +++  G+G S              G  S 
Sbjct: 109 KAAIEATTTTIDKR---ELEKAAEVIANAK-KILFYGVGGSASSAMDACYKFTKLGYVSM 164

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVA 153
                         + + D+ + +S SG + ++  I  +A++    +IAIT  +  S + 
Sbjct: 165 MSPDFHTMLPLAANLEKHDVFVAVSTSGRTKDVLEIARFAKKQGATVIAITKLDPSSPLY 224

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             ADI L LP   +    G     S + QL I DAL +       
Sbjct: 225 KEADIKLCLPDVEQDHRIG--SMASRMTQLNIIDALYLITFHQVG 267


>gi|77463426|ref|YP_352930.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           2.4.1]
 gi|126462282|ref|YP_001043396.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221639282|ref|YP_002525544.1| Inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           KD131]
 gi|332558304|ref|ZP_08412626.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           WS8N]
 gi|77387844|gb|ABA79029.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           2.4.1]
 gi|126103946|gb|ABN76624.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           ATCC 17029]
 gi|221160063|gb|ACM01043.1| Inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           KD131]
 gi|332276016|gb|EGJ21331.1| inosine-5'-monophosphate dehydrogenase [Rhodobacter sphaeroides
           WS8N]
          Length = 482

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEGRMAIAMAQAGGIGVIHRNLGIEEQAREVSRVKRFESGIVYAPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +          VVDE  ++ GI+T  D+      + +   V+ +M 
Sbjct: 99  ---RPDQTLADAKALQERYNVTGFPVVDESGRVVGIVTNRDMRFA---NDDRTPVKVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   IL++      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SDNLAILQEPADRDTAISLMKARRIEKLLVTDGQGKLTGLLTLKD 197



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +  D  L  A  L  ++N++   VVD+  + +GIV   D+
Sbjct: 95  PITLRPDQTLADAKALQERYNVTGFPVVDESGRVVGIVTNRDM 137


>gi|297196332|ref|ZP_06913730.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
 gi|297153173|gb|EFH32186.1| oxidoreductase [Streptomyces pristinaespiralis ATCC 25486]
          Length = 142

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    L++A  ++ +   G V V D G  + G++T+ DI  R+  +  D   +S     
Sbjct: 16  VRPDASLVEAARLMRDLDIGDVLVAD-GDTVVGMLTDRDITLRSVAEGADPAGVSASSAC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  +  D  +  A++L+R H +  L VV +  + +G+V   DL   
Sbjct: 75  TPDPVCVTPDDSVASAVRLMRTHAVRRLPVV-EDGRPLGVVSLGDLAAA 122



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM      +  D  L  A +L+R  +I  ++V D     +G++   D+ 
Sbjct: 5   VREVMTAGVAAVRPDASLVEAARLMRDLDIGDVLVADGD-TVVGMLTDRDIT 55


>gi|269103267|ref|ZP_06155964.1| inosine-5'-monophosphate dehydrogenase [Photobacterium damselae
           subsp. damselae CIP 102761]
 gi|268163165|gb|EEZ41661.1| inosine-5'-monophosphate dehydrogenase [Photobacterium damselae
           subsp. damselae CIP 102761]
          Length = 454

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/170 (22%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 8   NIPMLSASMDTVTEGRLAIALAQEGGIGFIHKNMSIEQQAAQVRMVKKFEAGVV---SEP 64

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   +  E  F    VV +  +L GIIT  D+   F  DL +L V +VM 
Sbjct: 65  VTVKPDNTIADVKRLTEENGFAGYPVVTDNNELIGIITGRDVR--FVTDL-SLKVVEVMT 121

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              K     E         ++++H +  +++VDD  +  G++   D  + 
Sbjct: 122 PKEKLASAKEGASREEVEAIMQKHRVEKVLLVDDSFRLKGMITAKDFQKA 171


>gi|256393656|ref|YP_003115220.1| RpiR family transcriptional regulator [Catenulispora acidiphila DSM
           44928]
 gi|256359882|gb|ACU73379.1| transcriptional regulator, RpiR family [Catenulispora acidiphila
           DSM 44928]
          Length = 322

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/162 (27%), Positives = 70/162 (43%), Gaps = 4/162 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++E ++          AV+ + +  G V + GIG S  I   L   L   G  +F    A
Sbjct: 147 AVEDTVAQLDLEVLERAVDAVVSA-GAVDVYGIGASALIALDLHQKLHRIGHRAFAWPDA 205

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           EA+     ++ R D+ I +S +G++      L  A       IAIT+  +S +   AD+V
Sbjct: 206 EAALTSAALLGRGDVAIGISHTGATPATVTALAEAHDNGARTIAITNFPRSPITDVADLV 265

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
           LT      +   G     S I  L + D L + + + RNFS 
Sbjct: 266 LTTAVRETTFRSGA--MASRIAALTVVDCLFVGVAQ-RNFSR 304


>gi|83749992|ref|ZP_00946937.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia solanacearum
           UW551]
 gi|207723382|ref|YP_002253781.1| inosine-5'-monophosphate dehydrogenase protein [Ralstonia
           solanacearum MolK2]
 gi|207743216|ref|YP_002259608.1| inosine-5'-monophosphate dehydrogenase protein [Ralstonia
           solanacearum IPO1609]
 gi|83723342|gb|EAP70575.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia solanacearum
           UW551]
 gi|206588581|emb|CAQ35544.1| inosine-5'-monophosphate dehydrogenase protein [Ralstonia
           solanacearum MolK2]
 gi|206594613|emb|CAQ61540.1| inosine-5'-monophosphate dehydrogenase protein [Ralstonia
           solanacearum IPO1609]
          Length = 487

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 63/171 (36%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGNKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E   L  A +L+ +H +  ++VVD   +  G++   D+ + 
Sbjct: 152 TPGEKLVTVKEGASLEEAKRLMNKHRLERVLVVDGNFELRGLITVKDIQKA 202


>gi|288559508|ref|YP_003422994.1| 3-hexulose-6-phosphate isomerase Phi1 [Methanobrevibacter
           ruminantium M1]
 gi|288542218|gb|ADC46102.1| 3-hexulose-6-phosphate isomerase Phi1 [Methanobrevibacter
           ruminantium M1]
          Length = 196

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/194 (17%), Positives = 69/194 (35%), Gaps = 26/194 (13%)

Query: 35  KRGLSSLESSLQGELS----FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           K  + ++  +++              ++ I + +  + +TG G+SG      A  L   G
Sbjct: 5   KDAIEAILDNIRDAEDYLVEEDVATFIDIITSCEN-IFVTGAGRSGLAAKAFAMRLMHLG 63

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             S+ V    +       I  DD I+ +S SG ++ +      ++     ++A+TS  +S
Sbjct: 64  LSSYVVGETISP-----AINADDCILAISGSGETNTIVTAAKISKNRGAKVLALTSYPES 118

Query: 151 VVACHADIVLTLP----------------KEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            +   AD V+ +                  +          T   +  L   D +   L+
Sbjct: 119 TLGQLADCVILVKGRTKVEADDENYLKRQIKGNYTSLTPLGTAFELTSLVFLDGMVSELM 178

Query: 195 ESRNFSENDFYVLH 208
            +   +E D  + H
Sbjct: 179 NAMGKTEADLKLRH 192


>gi|257094076|ref|YP_003167717.1| crotonyl-CoA reductase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
 gi|257046600|gb|ACV35788.1| crotonyl-CoA reductase [Candidatus Accumulibacter phosphatis clade
           IIA str. UW-1]
          Length = 584

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 53/124 (42%), Gaps = 7/124 (5%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH- 277
             SD+MH G           L     I+ +K    V V+D   K  G++++ D+      
Sbjct: 460 KVSDLMHRGIISC--TPDDVLGTVAKIMVDKEIHAVVVMDGQGKAIGVVSQTDMVLARQG 517

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              ++  ++   D+M         + LL+ A+ L+    +  L+V ++  + +G++   D
Sbjct: 518 RSPQEARSMRAGDIMTPGCATCDAEMLLSDAVSLMTGRRMHRLVVTEND-RPVGVISMTD 576

Query: 335 LLRF 338
           ++R 
Sbjct: 577 VVRK 580



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           S+ D  +   G          +  + +            L DA+++++ +R   + VV E
Sbjct: 507 SQTDMVLARQGRSPQEARSMRAGDIMTPGCAT-CDAEMLLSDAVSLMTGRRMHRL-VVTE 564

Query: 260 GQKLKGIITEGDIFRNF 276
             +  G+I+  D+ R  
Sbjct: 565 NDRPVGVISMTDVVRKI 581


>gi|153874433|ref|ZP_02002658.1| Inosine-5'-monophosphate dehydrogenase [Beggiatoa sp. PS]
 gi|152069103|gb|EDN67342.1| Inosine-5'-monophosphate dehydrogenase [Beggiatoa sp. PS]
          Length = 490

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 56/172 (32%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP- 231
             P  SA M       LAI + +          ++H    +G        V      +  
Sbjct: 41  NIPIISAAMDTVTEARLAITIAQEGGIG-----IIHKNMSIGAQAQQVQTVKKFESGVIN 95

Query: 232 ---LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +   + +        V +VD    L GI+T  D+      D     V ++
Sbjct: 96  DPFTVSPDTSIQSVLALTRTHNISGVPIVD-NGLLVGIVTSRDLRFETRYDN---PVSNI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL ++ I  L+VV++  +  G+V   D+ + 
Sbjct: 152 MTPKERLVTVQEGASREEIKHLLHKYRIEKLLVVNEQFQLRGLVTVKDIQKA 203



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 30/64 (46%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 S++M   + +  V+ G    +   +L + R   + VV+E  +L+G++T  DI +
Sbjct: 143 RYDNPVSNIMTPKERLVTVQEGASREEIKHLLHKYRIEKLLVVNEQFQLRGLVTVKDIQK 202

Query: 275 NFHK 278
              K
Sbjct: 203 ATEK 206


>gi|90407905|ref|ZP_01216080.1| inositol-5-monophosphate dehydrogenase [Psychromonas sp. CNPT3]
 gi|90310996|gb|EAS39106.1| inositol-5-monophosphate dehydrogenase [Psychromonas sp. CNPT3]
          Length = 488

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        AIAL +     F   +  +     ++  + +  S V+    + 
Sbjct: 41  NIPVVSAAMDTVTEARFAIALAQEGGIGFIHKNMSIEVQAEQVRLVKIHESGVV---ANP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +  +  F    VV+   KL GIIT  D+   F  DLN   V DVM 
Sbjct: 98  ITVSPTTTLSEIKALTEQHGFAGYPVVETSGKLVGIITGRDVL--FETDLNK-CVADVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +N      +T       L+    I  +++VDD  K  G++   D  + 
Sbjct: 155 IKQNLVTASPNTARDEIEALMHSKRIEKVLLVDDAFKLQGMITVKDFRKA 204


>gi|18314177|ref|NP_560844.1| hypothetical protein PAE3588 [Pyrobaculum aerophilum str. IM2]
 gi|18161767|gb|AAL65026.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 55/115 (47%), Gaps = 3/115 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFH-KDLNTL 283
             S  ++     LI A  +L+ +  G +AV+D    +K   +++E DI R    K   + 
Sbjct: 9   RRSAVVITPKESLIQAAEMLAAESIGALAVIDSVTQKKPPAVLSERDIVRAVAMKMPLST 68

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE  M      I ED  +  A +L+  HNI  L+VV+   + +G+V   D+L+ 
Sbjct: 69  PVEAFMSPGLVTIEEDEDVRKAAKLMTMHNIRHLVVVNKQGELVGVVSIRDVLKE 123


>gi|302332284|gb|ADL22477.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus JKD6159]
          Length = 182

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L ++L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELTTTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +   HG A P  S   Q +    D++ + L+   N SE      H
Sbjct: 125 TNIVLPAGTKYDEHGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|186489216|ref|NP_001117443.1| unknown protein [Arabidopsis thaliana]
 gi|332194027|gb|AEE32148.1| Cystathionine beta-synthase (CBS) family protein [Arabidopsis
           thaliana]
          Length = 193

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 54/113 (47%), Gaps = 9/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVED 287
            +    + DA+  +++   G + V++  + Q + GI+TE D  +      +      V +
Sbjct: 62  CRTNDTVSDAVKNMAKHNIGSLVVLEPGDQQYIAGIVTERDYMKKIIGAGRSSKLTKVGE 121

Query: 288 VMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM        +   T +  AMQL+ +++I  + V+D   K +G++  +D+++ 
Sbjct: 122 VMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVID--GKIVGLISMVDVVKA 172



 Score = 39.1 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+     G    +      +VM     +  V  G  +I A+ ++SE     V V+D 
Sbjct: 99  TERDYMKKIIGAGRSSKLTKVGEVMTDESKLVTVSSGTNIIKAMQLMSENHIRHVPVID- 157

Query: 260 GQKLKGIITEGDIFRNF 276
             K+ G+I+  D+ +  
Sbjct: 158 -GKIVGLISMVDVVKAI 173


>gi|254252084|ref|ZP_04945402.1| IMP dehydrogenase/GMP reductase [Burkholderia dolosa AUO158]
 gi|124894693|gb|EAY68573.1| IMP dehydrogenase/GMP reductase [Burkholderia dolosa AUO158]
          Length = 486

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|297581637|ref|ZP_06943559.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297534044|gb|EFH72883.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQLRETSARQ 269


>gi|328951634|ref|YP_004368969.1| CBS domain containing membrane protein [Marinithermus
           hydrothermalis DSM 14884]
 gi|328451958|gb|AEB12859.1| CBS domain containing membrane protein [Marinithermus
           hydrothermalis DSM 14884]
          Length = 149

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 55/138 (39%), Gaps = 25/138 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              +   V+   PL++A  ++   RFG + VVD   +L G++   D+             
Sbjct: 1   MTPNPLTVRADVPLLEAAQLMLRNRFGGLPVVDAEGRLVGLVEVEDLLPRMSAVPFSDVR 60

Query: 278 -----------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                            ++L  + V   + K+ +V+  D  L  A+  + ++    + VV
Sbjct: 61  AMRLFDEWVDRDLAELYEELRQVPVAKALRKDVEVLHPDDPLDQALDRMAENRFRRMPVV 120

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D+  + +GI+   D LR 
Sbjct: 121 DETGRLVGILTRSDFLRL 138



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 24/45 (53%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           ++    PL  A+  ++E RF  + VVDE  +L GI+T  D  R  
Sbjct: 95  VLHPDDPLDQALDRMAENRFRRMPVVDETGRLVGILTRSDFLRLM 139


>gi|298291998|ref|YP_003693937.1| signal transduction protein with CBS domains [Starkeya novella DSM
           506]
 gi|296928509|gb|ADH89318.1| putative signal transduction protein with CBS domains [Starkeya
           novella DSM 506]
          Length = 143

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNT 282
            G  +  +     L +A T+L+ KR G + V D  +++ GII+E D+ R    D      
Sbjct: 10  KGHEVQTIGPEATLREAATLLATKRIGAIVVTDPERRVVGIISERDVVRVIGNDGPARLD 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V  VM         +  +   M+ +       L VV    K +GI+   D+++
Sbjct: 70  DPVSSVMTSKVVTCDGNETVHQIMESMTAGRFRHLPVV-QDGKLVGIISIGDVVK 123


>gi|78485957|ref|YP_391882.1| inosine-5'-monophosphate dehydrogenase [Thiomicrospira crunogena
           XCL-2]
 gi|78364243|gb|ABB42208.1| inosine-5'-monophosphate dehydrogenase [Thiomicrospira crunogena
           XCL-2]
          Length = 486

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 15/169 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ +          ++H    +       + V      + L
Sbjct: 40  NIPFVSAAMDTVTEARLAISMAQEGGIG-----IVHKNMTIDEQADVVTKVKKYEHGVVL 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V++   + D +    + R     V+D G  L GI+T  D+            V  +
Sbjct: 95  EPITVQVNDTVQDVLEKTKQNRVSSAPVMD-GDDLVGIVTSRDLRYLVD---LAQPVSQI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M        + E       ++LL QH +  L+VVDD  K  G++   D+
Sbjct: 151 MTPKDRLVTVKEKVKREEVLELLHQHRLERLLVVDDNFKLKGMITVKDM 199


>gi|289642110|ref|ZP_06474262.1| putative signal transduction protein with CBS domains [Frankia
           symbiont of Datisca glomerata]
 gi|289508073|gb|EFD29020.1| putative signal transduction protein with CBS domains [Frankia
           symbiont of Datisca glomerata]
          Length = 144

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RN 275
              A ++MH       +     L+DA   + +   G + +  +  +L+GIIT+ DI  R 
Sbjct: 1   MTTAQEIMHRDAEC--IGESETLVDAARRMRDLGVGALPICGDDNRLQGIITDRDIVIRC 58

Query: 276 FH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +D  T    ++    P  I  D  +   +Q + +H I  L V+D+  + +G++   
Sbjct: 59  LAEGRDPATTRARELGQGRPFYIDADANVDEVLQQMMEHRIKRLPVIDN-NQLVGMISES 117

Query: 334 DLLR 337
           DL R
Sbjct: 118 DLAR 121



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +     + + +  + E R   + V+D   +L G+I+E D+ RN  ++     VE +
Sbjct: 81  IDADANVDEVLQQMMEHRIKRLPVID-NNQLVGMISESDLARNLPEEKLGQLVEAI 135


>gi|156741506|ref|YP_001431635.1| signal transduction protein [Roseiflexus castenholzii DSM 13941]
 gi|156232834|gb|ABU57617.1| putative signal transduction protein with CBS domains [Roseiflexus
           castenholzii DSM 13941]
          Length = 212

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                +  V     + DA+ +  EKR     V+D   +L GI+ E D+            
Sbjct: 6   RMSAPVITVAPKTTVSDALMLFREKRIRRAPVIDHH-RLVGIVAERDLLFASPSPITSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ L+V++VM      + EDT +  A +++    +  L V+      +GI+  
Sbjct: 65  VWELNYLLSKLTVDEVMTHEVITVAEDTPIEEAARIMADKRVGGLPVMRGHD-VVGIITE 123

Query: 333 LDLLRF 338
            DL + 
Sbjct: 124 TDLFKI 129



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M      +   T ++ A+ L R+  I    V+D   + +GIV   DLL
Sbjct: 3   VGERMSAPVITVAPKTTVSDALMLFREKRIRRAPVIDH-HRLVGIVAERDLL 53



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    P+ +A  I+++KR G + V+  G  + GIITE D+F+  
Sbjct: 81  MTHEVITVAEDTPIEEAARIMADKRVGGLPVM-RGHDVVGIITETDLFKIL 130


>gi|332967938|gb|EGK07026.1| inosine-5'-monophosphate dehydrogenase [Kingella kingae ATCC 23330]
          Length = 488

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 65/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H    +    +    V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTIEQQALAVRKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + +   S+++     + V E  K+ GI+T  D+   F   L  L V  
Sbjct: 95  DPITVSPNKLIGELLQERSQRKRKMSGLPVVENGKVIGIVTNRDLR--FETRL-DLPVSA 151

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M        +   T +  A +L+ QH I  ++V+++  +  G++   D+++
Sbjct: 152 IMTPREKLVSVSVGTSIEEARELMHQHKIERVLVLNEKDELKGLITVKDIIK 203



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 31/56 (55%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            S +M   + +  V +G  + +A  ++ + +   V V++E  +LKG+IT  DI +N
Sbjct: 149 VSAIMTPREKLVSVSVGTSIEEARELMHQHKIERVLVLNEKDELKGLITVKDIIKN 204


>gi|307596435|ref|YP_003902752.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307551636|gb|ADN51701.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 255

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
           +      V     L  A+ ++       + + D+  +L GI+T  D+ R   K       
Sbjct: 135 ANRDPIRVSEDASLASAMEVMVRHGIRHLLIADQD-RLLGIMTVKDVLRYAIKYYKLRGQ 193

Query: 282 ---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +++V  +M  NP  I     L  A++L+R++NI  L +V +  + +GI+   D+++
Sbjct: 194 VDLSIAVSKLMSHNPVTIDSAASLIDAVRLMRRNNIGSLPIV-EAGRLMGIITEHDVVK 251



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 3/128 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G   +    V +       V  G   +  I  + +       V+ +G +L GIITE DI 
Sbjct: 60  GINALREPVVKYGSGKFLTVLHGDDAMAVIRKMLDNGIDHALVL-KGNELAGIITERDIV 118

Query: 274 RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               + +     V +V  ++P  + ED  L  AM+++ +H I  L++ D   + +GI+  
Sbjct: 119 NKMPEQVFVKYRVHEVANRDPIRVSEDASLASAMEVMVRHGIRHLLIADQD-RLLGIMTV 177

Query: 333 LDLLRFGI 340
            D+LR+ I
Sbjct: 178 KDVLRYAI 185



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   +     LIDA+ ++     G + +V E  +L GIITE D+ ++  K
Sbjct: 204 MSHNPVTIDSAASLIDAVRLMRRNNIGSLPIV-EAGRLMGIITEHDVVKSIIK 255


>gi|153810953|ref|ZP_01963621.1| hypothetical protein RUMOBE_01343 [Ruminococcus obeum ATCC 29174]
 gi|149832841|gb|EDM87924.1| hypothetical protein RUMOBE_01343 [Ruminococcus obeum ATCC 29174]
          Length = 484

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F  D  T  + + 
Sbjct: 96  DPFFLSADHTLEDANNLMAKFRISGVPIT-EGKKLVGIITNRDLK--FETDF-TKKIREC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VDD     G++   D+
Sbjct: 152 MTSEGLITAKEGITLEEAKKILAKSRKEKLPIVDDDFNLKGLITIKDI 199


>gi|163789411|ref|ZP_02183850.1| hypothetical protein CAT7_01547 [Carnobacterium sp. AT7]
 gi|159875265|gb|EDP69330.1| hypothetical protein CAT7_01547 [Carnobacterium sp. AT7]
          Length = 226

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 53/126 (42%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +   ++  V     +++A+ I+ E  F  + VV    ++ G+IT+  I  N         
Sbjct: 6   YMTATVVTVTEETKVLEALDIMKENDFHRLPVV-RNGRMIGLITQEIIQENSPSTATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L    V D+M K    I  D LL  A   +R   I VL VV++  K +GI+  
Sbjct: 65  IHEMNYLLTKTKVGDIMQKKVLTIQADDLLEEAAARMRDQEIGVLPVVEEENKIVGIITD 124

Query: 333 LDLLRF 338
            D+   
Sbjct: 125 KDIFSA 130



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/49 (20%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+  M      + E+T +  A+ ++++++   L VV    + IG++ 
Sbjct: 1   MDVKSYMTATVVTVTEETKVLEALDIMKENDFHRLPVV-RNGRMIGLIT 48



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           ++    L +A   + ++  G + VV+E  K+ GIIT+ DIF  F
Sbjct: 88  IQADDLLEEAAARMRDQEIGVLPVVEEENKIVGIITDKDIFSAF 131


>gi|325527456|gb|EGD04794.1| inosine 5'-monophosphate dehydrogenase [Burkholderia sp. TJI49]
          Length = 486

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|325568715|ref|ZP_08145008.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
 gi|325157753|gb|EGC69909.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
          Length = 283

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 70/194 (36%), Gaps = 6/194 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    S   +++   +    ++ +  A +   +    L+     L+ E       A   I
Sbjct: 72  MLMQESELAALSIHENIEKSDNELTIAQKVFDSIMTTLTDTRKLLKEE---DLQKAAAMI 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
                R+   G+G S  + +        +    F          +  ++T DD    +S 
Sbjct: 129 -NESNRLFFFGVGGSEIVATDAYHKFLRSSISVFHSADFHIQLMEAAVLTPDDCAFFISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G S E   +   A+     +I +TS   S +A   D+VL      +         +S I
Sbjct: 188 TGKSRETIELANVAKSNGAKIIVVTSHAASPLAKLGDVVLI--SISQEIEFRSEALSSRI 245

Query: 181 MQLAIGDALAIALL 194
            QL+I D+L + ++
Sbjct: 246 AQLSILDSLYVIVM 259


>gi|309779352|ref|ZP_07674114.1| glk protein [Ralstonia sp. 5_7_47FAA]
 gi|308921910|gb|EFP67545.1| glk protein [Ralstonia sp. 5_7_47FAA]
          Length = 288

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 56/140 (40%), Gaps = 5/140 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
             +R +      L+    +LQG        A   +     R+ + G G SG +     + 
Sbjct: 114 SGMRVLQNAIDSLT----TLQGRFDPHTLDAAVALVDSAHRIDLYGFGSSGVVALDAQTK 169

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G P+            L ++   D++I +S SG+  EL+  +   R   + +IA+T
Sbjct: 170 FFRYGIPANAYSDPYLVSMSLNVLQAGDVVIAISKSGALPELQTAVERVRELGVRVIAVT 229

Query: 146 SENKSVVACHADIVLTLPKE 165
           +   S +A  AD+VL    +
Sbjct: 230 T-PGSPLAALADVVLPAGVD 248


>gi|153216095|ref|ZP_01950269.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229521096|ref|ZP_04410517.1| transcriptional regulator RpiR family [Vibrio cholerae TM 11079-80]
 gi|229527293|ref|ZP_04416686.1| transcriptional regulator RpiR family [Vibrio cholerae 12129(1)]
 gi|124114471|gb|EAY33291.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|229335301|gb|EEO00785.1| transcriptional regulator RpiR family [Vibrio cholerae 12129(1)]
 gi|229341981|gb|EEO06982.1| transcriptional regulator RpiR family [Vibrio cholerae TM 11079-80]
 gi|327483085|gb|AEA77492.1| Sialic acid utilization regulator, RpiR family [Vibrio cholerae
           LMA3894-4]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|114319424|ref|YP_741107.1| isocitrate dehydrogenase, NADP-dependent [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114225818|gb|ABI55617.1| isocitrate dehydrogenase, NADP-dependent [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 586

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G       D+M+       V     + DA+ ++ EKR   V      +   GI+T+ D
Sbjct: 451 ASGRTPHTVGDLMNPNPVT--VPAETSVEDAMHLMREKRISSVITEPGTEGEWGIMTQRD 508

Query: 272 -IFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            + R   K+   +T+ VE++  +       DT L    +++ + NI  ++V+D+  K +G
Sbjct: 509 VLSRIVSKNRTPSTVQVEEIASRPLVTTPVDTSLHDCAEIMSESNIRRMVVMDNNNKPVG 568

Query: 329 IVHFLDL 335
           I+   D+
Sbjct: 569 IISDTDI 575


>gi|256961117|ref|ZP_05565288.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|256951613|gb|EEU68245.1| sugar isomerase [Enterococcus faecalis Merz96]
          Length = 184

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + Q   + +    VE+IK     + + G G+SG      A+ L   G     V 
Sbjct: 9   LAELTQNAQRIDTNEIAHFVEQIKQA-NHIFLNGAGRSGIAIRAFANRLMHIGFSVSIVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A++  I L  +T + +S +   AD
Sbjct: 68  EISSPHS-----KPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLAD 122

Query: 158 IVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
           +VL LP   +            P  SA  QLA    D + + L++    +    +  H
Sbjct: 123 VVLVLPGTTKEENDRETASFAQPMGSAFEQLAFLTFDGMVLNLMDELGETSETMFKRH 180


>gi|253732990|ref|ZP_04867155.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           TCH130]
 gi|253729043|gb|EES97772.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           TCH130]
          Length = 182

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   K  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAK-HIFVAGKGRSGFVANSFAMRLNQLGKKAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +    G A P  S   Q +    D++ + L+   N +E      H
Sbjct: 125 TNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNH 178


>gi|163802483|ref|ZP_02196376.1| inositol-5-monophosphate dehydrogenase [Vibrio sp. AND4]
 gi|159173784|gb|EDP58599.1| inositol-5-monophosphate dehydrogenase [Vibrio sp. AND4]
          Length = 487

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPDATIADVVALTDKHGFAGFPVVTENNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 AKETLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|327401357|ref|YP_004342196.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327316865|gb|AEA47481.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 311

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 48/128 (37%), Gaps = 1/128 (0%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G      V           +  ++    L D + ++ +K  G   ++D   ++ G++TE 
Sbjct: 98  GNNLLAAVNEEVREIMEREVISIEFTESLEDGLDVILKKGVGGCPIIDRDDRVVGMVTER 157

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D      +   T  V   M +       +T +  AM+ +    I  L V+      +G++
Sbjct: 158 DYLAYLAESNLTGEVSKYMTRGVITAKPETSIEDAMKTMISRKIRRLPVI-KDGVLVGLI 216

Query: 331 HFLDLLRF 338
               L+RF
Sbjct: 217 TSSTLVRF 224



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 17/146 (11%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGI 266
            P           + +  +  ++  +     ++ A+  +    F  + + D G ++L+GI
Sbjct: 15  EPKKTNRKSIKPGTIMDIATTNVVTIPPTSTVMAAVKSMVTYSFRRLPIADPGTKRLEGI 74

Query: 267 ITEGDIFRNFHKDLNTLSVED----------------VMIKNPKVILEDTLLTVAMQLLR 310
           IT  DI   F        VED                +M +    I     L   + ++ 
Sbjct: 75  ITATDIINFFGGGSKHRIVEDRYGNNLLAAVNEEVREIMEREVISIEFTESLEDGLDVIL 134

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +    ++D   + +G+V   D L
Sbjct: 135 KKGVGGCPIIDRDDRVVGMVTERDYL 160



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 22/124 (17%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDLN 281
           K    + DA+  +  ++   + V+ +   L G+IT   + R F              D+ 
Sbjct: 184 KPETSIEDAMKTMISRKIRRLPVI-KDGVLVGLITSSTLVRFFSGEAFRSLITGDASDIL 242

Query: 282 TLSVEDVMI-------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  ++        K P     D  ++   + +   N    ++V D  +  GI+   D
Sbjct: 243 EKPISSILANGNVLEYKEPLAFPPDANISEVARRMIDVNHGAALIVSD-GRLEGIITERD 301

Query: 335 LLRF 338
           ++RF
Sbjct: 302 IVRF 305



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 67/182 (36%), Gaps = 35/182 (19%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT----- 161
           GM+T  D +  L+ S  + E+   +            IT++ ++ +      +++     
Sbjct: 152 GMVTERDYLAYLAESNLTGEVSKYM--------TRGVITAKPETSIEDAMKTMISRKIRR 203

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
           LP   +    GL  T+S ++               R FS   F  L  G     L    S
Sbjct: 204 LPVIKDGVLVGLI-TSSTLV---------------RFFSGEAFRSLITGDASDILEKPIS 247

Query: 222 DVMHSGDSIPLV-----KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            ++ +G+ +             + +    + +   G   +V    +L+GIITE DI R  
Sbjct: 248 SILANGNVLEYKEPLAFPPDANISEVARRMIDVNHGAALIV-SDGRLEGIITERDIVRFL 306

Query: 277 HK 278
           +K
Sbjct: 307 YK 308


>gi|298675708|ref|YP_003727458.1| peptidase M50 [Methanohalobium evestigatum Z-7303]
 gi|298288696|gb|ADI74662.1| peptidase M50 [Methanohalobium evestigatum Z-7303]
          Length = 365

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + + +  + EK+     V+ EG  LKG+++  D+ +   ++ + + V D+M K+
Sbjct: 253 VNPSMSIQELLDFMFEKKHMGYPVM-EGNNLKGVVSFTDVRKVMPEERSAMRVSDIMTKD 311

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 DT  + A +L+ ++N+  L+V+D+  +  GIV   DL+R
Sbjct: 312 IISTTSDTNASEAFKLISRNNVGRLLVIDN-GELKGIVSRTDLIR 355



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 3/73 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  +          +  SD+M                +A  ++S    G + V+D   +L
Sbjct: 288 FTDVRKVMPEERSAMRVSDIMTKDIIST--TSDTNASEAFKLISRNNVGRLLVID-NGEL 344

Query: 264 KGIITEGDIFRNF 276
           KGI++  D+ R  
Sbjct: 345 KGIVSRTDLIRTL 357



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L   +V+D+M  + + +     +   +  + +       V++      G+V F D+ +
Sbjct: 237 LEKYTVKDIMTTDVETVNPSMSIQELLDFMFEKKHMGYPVMEGNN-LKGVVSFTDVRK 293


>gi|221213175|ref|ZP_03586150.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD1]
 gi|221166627|gb|EED99098.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD1]
          Length = 282

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNTLSAGSVAEAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGPQDVVVAISNTGRTRDIVDAARAALACGAKVVAIT-HSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|295401163|ref|ZP_06811136.1| Nucleotidyl transferase [Geobacillus thermoglucosidasius C56-YS93]
 gi|294976756|gb|EFG52361.1| Nucleotidyl transferase [Geobacillus thermoglucosidasius C56-YS93]
          Length = 349

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 20/100 (20%), Positives = 46/100 (46%), Gaps = 1/100 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LV     +I+ +  + +       VVD+  +L G +T+GDI R   + ++    V  VM 
Sbjct: 8   LVSPSTSIIETMKNIDQTAAQIALVVDDDFRLLGTVTDGDIRRGILRGISLDDQVSKVMN 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           KNP  + +        ++ ++  +  L +++   + + ++
Sbjct: 68  KNPITMKKGASKQSIKRMFQEKKLRQLPILNQNNQVVDVI 107


>gi|254413385|ref|ZP_05027156.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
 gi|196180005|gb|EDX74998.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
          Length = 501

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLS 284
                +V     + + I  L+E +   V VV E  +L GI TE D  R   + L+   LS
Sbjct: 18  DRHPLIVTPQMRVTEVINRLNEHQSSYVLVVQEK-RLVGIFTERDFVRIAAQQLSLENLS 76

Query: 285 VEDVMIKNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++ VM  +P    I +D  +   + LLRQH+I  L V+D   + IG++ 
Sbjct: 77  IQSVMTPDPITVSIDQDQGIFSILYLLRQHHIRHLPVIDKGGEIIGVIT 125



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 10/113 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIFR--NFHKDLNTLSVED 287
            +   L++    +   +  C+ + +         +GIITE DI +      +    S E 
Sbjct: 156 SVTASLLEITQQMLTHKKSCIVITETQNNADIVPQGIITERDIIQFQKMGINFAITSAET 215

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM     P  I +  +L  A +++++H I  L+VVD+  +  GI+    +L  
Sbjct: 216 VMSTPLLPIKIDDSMML--ANEMMKRHKIRRLVVVDEAGRLAGIITQSTILEA 266



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 53/146 (36%), Gaps = 7/146 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E DF  +    +L    +    VM        +     +   + +L +     + V+D
Sbjct: 57  FTERDFVRI-AAQQLSLENLSIQSVMTPDPITVSIDQDQGIFSILYLLRQHHIRHLPVID 115

Query: 259 EGQKLKGIITEGDIFRNFHK-DLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +G ++ G+IT   I       DL     V DVM            L    Q +  H  S 
Sbjct: 116 KGGEIIGVITPKTIREVVQPTDLLKFKRVADVMTSQVIQNSVTASLLEITQQMLTHKKSC 175

Query: 317 LMVVDDCQK----AIGIVHFLDLLRF 338
           +++ +          GI+   D+++F
Sbjct: 176 IVITETQNNADIVPQGIITERDIIQF 201



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/79 (18%), Positives = 29/79 (36%), Gaps = 3/79 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D       G    +    + +      I +      ++ A  ++   +   + VVD
Sbjct: 193 ITERDIIQFQKMGINFAITSAETVMSTPLLPIKI---DDSMMLANEMMKRHKIRRLVVVD 249

Query: 259 EGQKLKGIITEGDIFRNFH 277
           E  +L GIIT+  I    +
Sbjct: 250 EAGRLAGIITQSTILEALN 268



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++P ++     +T  +  L +H  S ++VV   ++ +GI    D +R 
Sbjct: 19  RHPLIVTPQMRVTEVINRLNEHQSSYVLVV-QEKRLVGIFTERDFVRI 65


>gi|149201936|ref|ZP_01878910.1| CBS domain protein [Roseovarius sp. TM1035]
 gi|149144984|gb|EDM33013.1| CBS domain protein [Roseovarius sp. TM1035]
          Length = 144

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           +     + +A   L+E+R G + V  +G+ ++GII+E DI R+         T +V ++M
Sbjct: 18  ISPQTKVSEAAQTLAERRIGGLVVSRDGETVEGIISERDIVRSLAVRGVVCMTETVSEMM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +NP            +  +       + VV +  K +GIV   D+++  +
Sbjct: 78  TRNPVCCSRQDTSDAVLARMTDGRFRHMPVV-EAGKLVGIVTIGDVVKARL 127



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I   T ++ A Q L +  I  L+V  D +   GI+   D++R
Sbjct: 16  ITISPQTKVSEAAQTLAERRIGGLVVSRDGETVEGIISERDIVR 59



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEG 270
            +  +      V       P+        DA +  +++ RF  + VV E  KL GI+T G
Sbjct: 62  AVRGVVCMTETVSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVV-EAGKLVGIVTIG 120

Query: 271 DIFRN-FHKDLNTLSVEDVMI 290
           D+ +    +     +  + MI
Sbjct: 121 DVVKARLEELAMEKTALEGMI 141


>gi|73541545|ref|YP_296065.1| inositol-5-monophosphate dehydrogenase [Ralstonia eutropha JMP134]
 gi|72118958|gb|AAZ61221.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha JMP134]
          Length = 487

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/168 (18%), Positives = 60/168 (35%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++            P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAIAMAQAGGIGIVH-KNFKPADQAREVARVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + + I +  +       V+ EG+ + GIIT  D+   F ++L    V   M   
Sbjct: 99  ISPDMKVREVIALSQQHGISGFPVL-EGKTVVGIITNRDLR--FEEEL-DAPVRAKMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ +H +  ++VV+   +  G++   D+ + 
Sbjct: 155 EKLVTVAEGAPLEEAKRLMNRHRLERVLVVNAAFELRGLITVKDIQKA 202



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               M   + +  V  G PL +A  +++  R   V VV+   +L+G+IT  DI +     
Sbjct: 147 VRAKMTPREKLVTVAEGAPLEEAKRLMNRHRLERVLVVNAAFELRGLITVKDIQKAVENP 206

Query: 280 LNTL 283
           L + 
Sbjct: 207 LASK 210


>gi|58579454|ref|YP_197666.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
 gi|58418080|emb|CAI27284.1| Inosine-5'-monophosphate dehydrogenase [Ehrlichia ruminantium str.
           Welgevonden]
          Length = 485

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 77/172 (44%), Gaps = 12/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +F       ++  +    S ++++  + 
Sbjct: 37  KIPIISAAMDTVTEANLAIALAQHGGIGCIHKNFSTDQQLLEVRKVKKHESWIVYNPIA- 95

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             V     L  A++I+ +  +  + VV   + G++L GI+T  D+    +KD     V D
Sbjct: 96  --VSPEDSLAVALSIMKKSSYSGIPVVTETENGKRLVGILTNRDVRFVENKDC---KVAD 150

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M K +   + E      A++LL+++    L+VVD+    +G++   D+ +F
Sbjct: 151 IMTKDHLITVPEGIERCDAIKLLQKYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|296501469|ref|YP_003663169.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           BMB171]
 gi|296322521|gb|ADH05449.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           BMB171]
          Length = 139

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++M  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 67  KITNIMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|323525144|ref|YP_004227297.1| glucokinase [Burkholderia sp. CCGE1001]
 gi|323382146|gb|ADX54237.1| glucokinase [Burkholderia sp. CCGE1001]
          Length = 638

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESR 197
           + +   R
Sbjct: 593 VGVAIRR 599


>gi|119946571|ref|YP_944251.1| inosine-5'-monophosphate dehydrogenase [Psychromonas ingrahamii 37]
 gi|119865175|gb|ABM04652.1| inosine-5'-monophosphate dehydrogenase [Psychromonas ingrahamii 37]
          Length = 488

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 41/170 (24%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        AIAL +     F   +  +     ++  + +  S V+ S  + 
Sbjct: 41  NIPVVSAAMDTVTESRFAIALAQEGGIGFIHKNMSIALQAEEVRLVKIHESGVVASPIT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +  +  F    VV++  +L GIIT  D+   F  DLN L V  VM 
Sbjct: 100 --VSPKTTLEEIKELTDKHGFAGYPVVEDSGELIGIITGRDVL--FETDLNKL-VSSVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             K+      +T      +L+  H I  +++ DD  K  G++   D  + 
Sbjct: 155 GKKDLVTAKSNTPRDEIEKLMHAHRIEKVLLTDDNFKLCGMITVKDFRKA 204


>gi|293606465|ref|ZP_06688823.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
 gi|292815088|gb|EFF74211.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
          Length = 154

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 56/116 (48%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
            S +++  V     + DAI  ++E+R G V VV +G+ + G+++E D  R      +   
Sbjct: 19  KSNNAVVTVSPDSSVFDAIKTMAERRIGAVVVV-QGETVLGMLSERDYARKVVLQDRSSR 77

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V D+M  +   +         M ++ + +   L V+++  K IG++   DL++
Sbjct: 78  TTKVRDIMTDSVYYVGPGDTREHCMAMMTERHFRHLPVIENE-KLIGLLSIGDLVK 132


>gi|326315716|ref|YP_004233388.1| RpiR family transcriptional regulator [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372552|gb|ADX44821.1| transcriptional regulator, RpiR family [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 281

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G SG +           G  S              ++   D ++++S SG + 
Sbjct: 132 RIEFYGAGNSGIVAQDAQHKFFRLGVTSLSTSDGHMQVMSATLLGPGDCVVIVSNSGRTR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +L      AR+     IAIT+   S +A    I L          +  +P  S ++ L I
Sbjct: 192 DLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDRY--SPMVSRLLHLLI 248

Query: 186 GDALAIALLESRN 198
            D LA  +     
Sbjct: 249 IDVLATCVALRIG 261


>gi|325916005|ref|ZP_08178298.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas vesicatoria
           ATCC 35937]
 gi|325537815|gb|EGD09518.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas vesicatoria
           ATCC 35937]
          Length = 485

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  +   +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPAQQAAEVAKVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     + + I +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VSPDTTIGEVIALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+D  +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKILVVNDSFELRGLITVKDIQKK 203


>gi|288920279|ref|ZP_06414592.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
 gi|288348303|gb|EFC82567.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
          Length = 139

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
              +   V+    L +A   + E   G V VVD+  +L GI+T+ DI        +D + 
Sbjct: 9   MTRAPATVRPDETLAEAARTMRETEAGDVLVVDD-GELVGILTDRDIVVRIVAEDRDTSA 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V +      + +  DTL+  A +L+R   +  L VV+  Q  IGIV   DL
Sbjct: 68  AKVSEACSTELETVTPDTLIDDAAELMRLRAVRRLPVVEGTQ-PIGIVSLGDL 119



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +V +VM + P  +  D  L  A + +R+     ++VVDD  + +GI+   D++
Sbjct: 2   ATTVAEVMTRAPATVRPDETLAEAARTMRETEAGDVLVVDD-GELVGILTDRDIV 55


>gi|332755576|gb|EGJ85939.1| protein gutQ domain protein [Shigella flexneri 2747-71]
          Length = 85

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 19 MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
          M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1  MSEALLNTGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79 GSKLASTLASTGTPSF 94
          G K+A+TLASTGTP+F
Sbjct: 57 GKKIAATLASTGTPAF 72


>gi|284107508|ref|ZP_06386389.1| signal-transduction protein with CBS domains [Candidatus
           Poribacteria sp. WGA-A3]
 gi|283829934|gb|EFC34215.1| signal-transduction protein with CBS domains [Candidatus
           Poribacteria sp. WGA-A3]
          Length = 144

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 52/107 (48%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +     +  A+ +++EK  G + V+D G+K+ GI +E D  R      +      + ++M
Sbjct: 18  IGPDETVYKALQMMAEKEIGALLVLD-GEKVVGIFSERDYARKVILQGRSSANTKISELM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I++      D  +  +M ++  + I  L V+++  K  G+V   D++
Sbjct: 77  IRDVIYGSPDDPIQESMAIMTANKIRHLPVIEE-GKLCGMVTSGDII 122



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 8/123 (6%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-----FSENDFYVLHPGGKL 213
            +   K       G   T    +Q+     +   L+         FSE D+         
Sbjct: 6   HILKNKGSSVWSIGPDETVYKALQMMAEKEIGALLVLDGEKVVGIFSERDYA--RKVILQ 63

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G               +       P+ +++ I++  +   + V+ E  KL G++T GDI 
Sbjct: 64  GRSSANTKISELMIRDVIYGSPDDPIQESMAIMTANKIRHLPVI-EEGKLCGMVTSGDII 122

Query: 274 RNF 276
            + 
Sbjct: 123 NHI 125


>gi|282165223|ref|YP_003357608.1| peptidase M50 family protein [Methanocella paludicola SANAE]
 gi|282157537|dbj|BAI62625.1| peptidase M50 family protein [Methanocella paludicola SANAE]
          Length = 373

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
           G  +  AI  +   +     VV E  K+ GI+T  D+ R   +   T  V D+M +N   
Sbjct: 257 GTTVAQAIDTMFRLKHLGYPVV-EAGKMVGIVTLNDVSRVPVEARATTPVRDIMTRNVIT 315

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  D     A+Q L  + I  L+V+D   +  GIV   D+L+ 
Sbjct: 316 LKPDDDAFTALQKLSTNKIGRLVVMD-GGQMAGIVSRTDMLKA 357



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFLDLLR 337
           L  + V+D+M  +   +   T +  A+  +    +  L   VV +  K +GIV   D+ R
Sbjct: 238 LEGIKVKDIMTTDVHTLDVGTTVAQAIDTM--FRLKHLGYPVV-EAGKMVGIVTLNDVSR 294


>gi|209522754|ref|ZP_03271312.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
 gi|209496803|gb|EDZ97100.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
          Length = 1769

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 9/114 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-------QKLKGIITEGDIFR--NFHKDLNTLS 284
                L+D   +L++ R  CV + +         ++  GIITE DI +       +   S
Sbjct: 163 PPDRTLLDIAQLLTQNRVSCVIITEFDPADNPPIERPVGIITERDIVQFQAVGGAIRETS 222

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++VM      +  D  L  A Q + +  I  ++V  +    +GIV    LLR 
Sbjct: 223 AQEVMSSPLFTVRPDEFLWAAQQQMEERRIRRVVVTGERGNLVGIVTQTTLLRA 276



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 8/107 (7%)

Query: 233 VKIGCPLIDAITILS----EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVE 286
           +     + +AI ++S    E     + VV E  ++ GI+TE DI R   +   L +L V 
Sbjct: 26  ISPEATVEEAIALMSNPSRESDSSSIIVVTESDRIVGIVTERDIVRLAAQQQPLQSLLVG 85

Query: 287 DVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +VM +    + +  L  +   +  L++  +  L +VDD  + +G++ 
Sbjct: 86  EVMSQPVITLQQSELTDIFAIIDFLQKRGLRHLPIVDDHDRLLGLIS 132



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 9/111 (8%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMIKNPK 294
             +   I  L ++    + +VD+  +L G+I+   + R     DL  L SV +VM ++  
Sbjct: 101 TDIFAIIDFLQKRGLRHLPIVDDHDRLLGLISHESLQRLTRPVDLMRLRSVGEVMAQDVV 160

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDC-------QKAIGIVHFLDLLRF 338
               D  L    QLL Q+ +S +++ +         ++ +GI+   D+++F
Sbjct: 161 TSPPDRTLLDIAQLLTQNRVSCVIITEFDPADNPPIERPVGIITERDIVQF 211



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 4/51 (7%)

Query: 292 NPKVILEDTLLTVAMQLL----RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   I  +  +  A+ L+    R+ + S ++VV +  + +GIV   D++R 
Sbjct: 22  NVLTISPEATVEEAIALMSNPSRESDSSSIIVVTESDRIVGIVTERDIVRL 72



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 27/79 (34%), Gaps = 3/79 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D       G         S        +  V+    L  A   + E+R   V V  
Sbjct: 203 ITERDIVQFQAVGGAIRET---SAQEVMSSPLFTVRPDEFLWAAQQQMEERRIRRVVVTG 259

Query: 259 EGQKLKGIITEGDIFRNFH 277
           E   L GI+T+  + R F+
Sbjct: 260 ERGNLVGIVTQTTLLRAFN 278


>gi|157376487|ref|YP_001475087.1| CBS domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157318861|gb|ABV37959.1| CBS domain containing protein [Shewanella sediminis HAW-EB3]
          Length = 134

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 14/133 (10%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF- 276
           +           +  +++   L  A  I     F  + V+ E  +L+G+++E D  R   
Sbjct: 1   MKIKISEIMSTRVVTIEMDDRLSVAKEIFENAPFHHLLVI-EDDELQGVLSERDYLRALS 59

Query: 277 ---------HKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                     +D  TL      VM +NP  I     L  A +L+ +HNI  L V+    K
Sbjct: 60  PHVGNINETERDSETLQRRAHQVMSRNPVTIAPHKTLNEASRLMLEHNIGSLPVL-KRGK 118

Query: 326 AIGIVHFLDLLRF 338
            +GI+ + DLLR 
Sbjct: 119 IVGIITWKDLLRA 131



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +  +          +   +     L +A  ++ E   G + V+ +  K+ GIIT  D+ R
Sbjct: 72  SETLQRRAHQVMSRNPVTIAPHKTLNEASRLMLEHNIGSLPVL-KRGKIVGIITWKDLLR 130

Query: 275 NF 276
            +
Sbjct: 131 AY 132


>gi|84503094|ref|ZP_01001190.1| Putative inosine-5'-monophosphate dehydrogenase [Oceanicola
           batsensis HTCC2597]
 gi|84388638|gb|EAQ01510.1| Putative inosine-5'-monophosphate dehydrogenase [Oceanicola
           batsensis HTCC2597]
          Length = 482

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AI + ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTEARMAICMAQAGG-----MGVIHRNLDVQQQSDEVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L DA  +    R     VVDEG ++ GI+T  D+      + +   V  +
Sbjct: 94  KPITLRPDQTLADANDLRDRYRISGFPVVDEGGRVVGILTNRDMRFA---NDDKTPVHAM 150

Query: 289 MIKNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M      I+++      A+ L++   I  L++ D   K  G++   D
Sbjct: 151 MTSEDLAIMQEPADRDEAISLMKARRIEKLLITDRTGKLTGLLTLKD 197



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +  D  L  A  L  ++ IS   VVD+  + +GI+   D+
Sbjct: 95  PITLRPDQTLADANDLRDRYRISGFPVVDEGGRVVGILTNRDM 137


>gi|325292009|ref|YP_004277873.1| inositol-5-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
 gi|325059862|gb|ADY63553.1| inositol-5-monophosphate dehydrogenase [Agrobacterium sp. H13-3]
          Length = 501

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NLPILSSAMDTVTEGRLAIAMAQAGGIGVIH-RNLTPIEQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE-------GQKLKGIITEGDIFRNFHKDLNTLSV 285
           +     L +A  ++       + VV+          +L GI+T  D+            +
Sbjct: 105 IGPDATLAEAQALMKAHGISGIPVVENGGAGGHKNGRLVGILTNRDVRFASDP---QQKI 161

Query: 286 EDVMIK-NPKVILEDT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++M + N   + E +     A +LL +H I  L+VVD     +G++   D+
Sbjct: 162 YELMTRENLVTVKESSVDQQEARRLLHKHRIEKLLVVDGKGNCVGLITVKDM 213


>gi|323499812|ref|ZP_08104771.1| inosine 5'-monophosphate dehydrogenase [Vibrio sinaloensis DSM
           21326]
 gi|323315053|gb|EGA68105.1| inosine 5'-monophosphate dehydrogenase [Vibrio sinaloensis DSM
           21326]
          Length = 487

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAQMVHQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV    +L GIIT  D+   F  DL+   VE VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTANNELVGIITGRDVR--FVTDLSK-KVEAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|313899805|ref|ZP_07833308.1| transcriptional regulator, RpiR family [Clostridium sp. HGF2]
 gi|312955420|gb|EFR37085.1| transcriptional regulator, RpiR family [Clostridium sp. HGF2]
          Length = 281

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 38/207 (18%), Positives = 74/207 (35%), Gaps = 12/207 (5%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H   S F S+     ++        A  +  +   G++SL S++          AV  + 
Sbjct: 78  HLSESFFASLDENDTAM------NIAKATFQS---GITSLSSTMAVLNQDSLEQAVHLLG 128

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             K    + G+G S  I          T     F           G ++  D  +++S +
Sbjct: 129 RAKT-CGLFGMGASSVIVHSAYQRFLRTSLNCQFSLDYHMQLMYAGRLSEKDCALIVSHT 187

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + ++  I+   +   +P+I++TS   S +A  +D+ L      E         +S++ 
Sbjct: 188 GRNKDVLRIVDILKEHGVPIISVTSNAASPLARKSDVFLF--SISEETKFRPEAISSSVS 245

Query: 182 QLAIGDALAIALLESRNFSENDFYVLH 208
           QL + D L        +     F  + 
Sbjct: 246 QLMLMDTLFTLYAIKEDNDPEYFNRIR 272


>gi|186472103|ref|YP_001859445.1| signal-transduction protein [Burkholderia phymatum STM815]
 gi|184194435|gb|ACC72399.1| putative signal-transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 144

 Score = 79.9 bits (196), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
                +  ++    + +AI ++++K+ G + +V E   + GI+TE D  R      +   
Sbjct: 11  KPTQEVYTIEATDSVYNAIKLMADKQIGAL-IVKENGAIAGIVTERDYARKIVLMDRSSK 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V D+M    + +  +      M L+ +  +  L V+++  + IG+V   DL++
Sbjct: 70  TTPVRDIMSSAVRFVRPEQTTDECMALMTERRMRHLPVMEND-RLIGMVSIGDLVK 124



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 35/77 (45%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+          +      D+M S   +  V+      + + +++E+R   + V+ E
Sbjct: 53  TERDYARKIVLMDRSSKTTPVRDIMSSA--VRFVRPEQTTDECMALMTERRMRHLPVM-E 109

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+++ GD+ +N 
Sbjct: 110 NDRLIGMVSIGDLVKNI 126


>gi|323488425|ref|ZP_08093672.1| acetoin utilization protein [Planococcus donghaensis MPA1U2]
 gi|323397932|gb|EGA90731.1| acetoin utilization protein [Planococcus donghaensis MPA1U2]
          Length = 214

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 45/119 (37%), Gaps = 10/119 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
               +  +     + D + +  +KR     VVD G K+ GI+T+ D+             
Sbjct: 7   MKTDVHTLNSEQTVQDVMDLFKDKRVRHAPVVD-GGKVVGIVTDRDLKDAVPSRFTVSPK 65

Query: 281 ---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  V ++M  NP +      +     +  +H I  + VV   QK +G +   DLL
Sbjct: 66  GEPYKKKVAEIMTANPVIAHPLDFVEEVAMIFYEHKIGCIPVV-SNQKLVGFLTETDLL 123



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M  +   +  +  +   M L +   +    VVD   K +GIV   DL
Sbjct: 3   VEEIMKTDVHTLNSEQTVQDVMDLFKDKRVRHAPVVD-GGKVVGIVTDRDL 52


>gi|315649576|ref|ZP_07902661.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
 gi|315275049|gb|EFU38424.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
          Length = 278

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 69/191 (36%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
             +     G+  ++ N ++   ++++      + S+  +++     +   AV  +   K 
Sbjct: 74  DLQEPLATGYQDIRPNDSISAIIQNVSN--NNIQSIRDTMKIMEEGKVKEAVLALDQSK- 130

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  IG                            ++T DD  + +S+SG +D
Sbjct: 131 RIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPDDAAVCISYSGETD 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A+      I IT    S ++   DI L           G    +S I QL +
Sbjct: 191 EVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSGA--MSSRITQLNL 248

Query: 186 GDALAIALLES 196
            D L + +   
Sbjct: 249 IDILYLGVASR 259


>gi|119477018|ref|ZP_01617299.1| CBS domain containing membrane protein [marine gamma
           proteobacterium HTCC2143]
 gi|119449825|gb|EAW31062.1| CBS domain containing membrane protein [marine gamma
           proteobacterium HTCC2143]
          Length = 204

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQ-LAIGDALAIALLESRNFSEN-DFYVLHPGGKLGTLF 217
           ++ P +       ++P  ++         +  +A    RN S+  + Y         +  
Sbjct: 11  ISTPIDQLLKSTNISPIAASTAVKAVSTHSDKVA---ERNLSKKTEIYQESQSQNRQSSE 67

Query: 218 VCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                      + P+V       L D   +L+ K F  + +VD+ Q+L+GI+++ D+ R 
Sbjct: 68  RSRVRYAREIMTSPVVTASVRLSLNDTWKLLAAKGFHHLPIVDDRQQLQGIVSDRDLLRY 127

Query: 276 FHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              D   +   S+E +M +       +  + +  +++    I  + +V D  + +GIV  
Sbjct: 128 AANDNRQVGGYSIEQLMTREVISADANAEVRLLAEIMCSRAIGSIPIVGDGAEVVGIVSR 187

Query: 333 LDLLRFGII 341
            D+LR G++
Sbjct: 188 TDILR-GLV 195


>gi|302188449|ref|ZP_07265122.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. syringae 642]
          Length = 644

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+       K   + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVKADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVSHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDERQAPLGIFTLRDLREA 232


>gi|15640234|ref|NP_229861.1| hypothetical protein VC0204 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121587553|ref|ZP_01677319.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153818549|ref|ZP_01971216.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821612|ref|ZP_01974279.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229506994|ref|ZP_04396502.1| transcriptional regulator RpiR family [Vibrio cholerae BX 330286]
 gi|229509364|ref|ZP_04398847.1| transcriptional regulator RpiR family [Vibrio cholerae B33]
 gi|229516311|ref|ZP_04405759.1| transcriptional regulator RpiR family [Vibrio cholerae RC9]
 gi|229524844|ref|ZP_04414249.1| transcriptional regulator RpiR family [Vibrio cholerae bv. albensis
           VL426]
 gi|229606502|ref|YP_002877150.1| transcriptional regulator RpiR family [Vibrio cholerae MJ-1236]
 gi|254851333|ref|ZP_05240683.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255744016|ref|ZP_05417970.1| transcriptional regulator RpiR family [Vibrio cholera CIRS 101]
 gi|262153625|ref|ZP_06028752.1| transcriptional regulator RpiR family [Vibrio cholerae INDRE 91/1]
 gi|9654610|gb|AAF93380.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548191|gb|EAX58261.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|126510888|gb|EAZ73482.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520899|gb|EAZ78122.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|229338425|gb|EEO03442.1| transcriptional regulator RpiR family [Vibrio cholerae bv. albensis
           VL426]
 gi|229346737|gb|EEO11707.1| transcriptional regulator RpiR family [Vibrio cholerae RC9]
 gi|229353679|gb|EEO18616.1| transcriptional regulator RpiR family [Vibrio cholerae B33]
 gi|229356099|gb|EEO21018.1| transcriptional regulator RpiR family [Vibrio cholerae BX 330286]
 gi|229369157|gb|ACQ59580.1| transcriptional regulator RpiR family [Vibrio cholerae MJ-1236]
 gi|254847038|gb|EET25452.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|255738281|gb|EET93672.1| transcriptional regulator RpiR family [Vibrio cholera CIRS 101]
 gi|262030566|gb|EEY49203.1| transcriptional regulator RpiR family [Vibrio cholerae INDRE 91/1]
          Length = 282

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLREIADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|330860291|emb|CBX70606.1| inosine-5'-monophosphate dehydrogenase [Yersinia enterocolitica
           W22703]
          Length = 444

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 59/165 (35%), Gaps = 10/165 (6%)

Query: 178 SAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
           SA M       LAIAL +     F   +  +     ++  +    S V+        V  
Sbjct: 3   SAAMDTVTEARLAIALAQEGGLGFIHKNMSIERQAEEVSRVKKHESGVV---TEPQTVTP 59

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NP 293
              L     + +   F    VV E  +L GIIT  D+   F  DL+   V  VM      
Sbjct: 60  TTTLRQVKELTARNGFAGYPVVTEDYELVGIITGRDVR--FVTDLDQ-PVTAVMTPKERL 116

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + E     V +Q + +  +   +VVDD     G++   D  + 
Sbjct: 117 VTVKEGEAREVVLQKMHEKRVEKALVVDDSFHLRGMITVKDFQKA 161


>gi|261418237|ref|YP_003251919.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. Y412MC61]
 gi|297529091|ref|YP_003670366.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. C56-T3]
 gi|319767803|ref|YP_004133304.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. Y412MC52]
 gi|261374694|gb|ACX77437.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y412MC61]
 gi|297252343|gb|ADI25789.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. C56-T3]
 gi|317112669|gb|ADU95161.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y412MC52]
          Length = 435

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   D    +++  P+     +  E R     VVD+  K++G++T  
Sbjct: 182 QLIKKEIVLVEDILIPLDKTAYLRVNDPIERWYALNKETRHSRFPVVDDELKVQGVVTAK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+      D   L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+
Sbjct: 242 DV---LDVD-RQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDYNRLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|49480286|ref|YP_034976.1| CBS domain-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|196036615|ref|ZP_03104009.1| CBS domain protein [Bacillus cereus W]
 gi|196042341|ref|ZP_03109614.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|228913410|ref|ZP_04077041.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|228925908|ref|ZP_04088989.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228932152|ref|ZP_04095038.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|229089785|ref|ZP_04221040.1| CBS domain protein [Bacillus cereus Rock3-42]
 gi|301052366|ref|YP_003790577.1| CBS domain-containing protein [Bacillus anthracis CI]
 gi|49331842|gb|AAT62488.1| CBS domain protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
 gi|195990815|gb|EDX54789.1| CBS domain protein [Bacillus cereus W]
 gi|196026822|gb|EDX65456.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|228693410|gb|EEL47116.1| CBS domain protein [Bacillus cereus Rock3-42]
 gi|228827448|gb|EEM73196.1| CBS domain protein [Bacillus thuringiensis serovar andalousiensis
           BGSC 4AW1]
 gi|228833620|gb|EEM79176.1| CBS domain protein [Bacillus thuringiensis serovar pondicheriensis
           BGSC 4BA1]
 gi|228846161|gb|EEM91182.1| CBS domain protein [Bacillus thuringiensis serovar pulsiensis BGSC
           4CC1]
 gi|300374535|gb|ADK03439.1| CBS domain protein [Bacillus cereus biovar anthracis str. CI]
          Length = 139

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 67  KITNVMTTNIISVSPDDSIEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|307546228|ref|YP_003898707.1| DNA-binding transcriptional regulator HexR [Halomonas elongata DSM
           2581]
 gi|307218252|emb|CBV43522.1| DNA-binding transcriptional regulator HexR [Halomonas elongata DSM
           2581]
          Length = 285

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 68/167 (40%), Gaps = 7/167 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L+ + +   S +    V+ +   K ++   G+G SG +             P     
Sbjct: 106 IAALDLARRETDSARVERVVDYLTQAK-QLHFFGLGASGAVAQDAQHKFFRFNIPVSAYI 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D+++VLS++G + EL  I   AR     ++ IT +  S +A    
Sbjct: 165 DVLMQRMVAAACHTGDVVVVLSYTGRTRELVDIAAQARANGAIVLGIT-DPNSPLADQCT 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
            +L +    ++  +   P TS ++QLA+ D LA  +   R     DF
Sbjct: 224 EILAVSAPEDTEHY--MPMTSRMIQLALIDVLATGVTLRRG---EDF 265


>gi|167586883|ref|ZP_02379271.1| inositol-5-monophosphate dehydrogenase [Burkholderia ubonensis Bu]
          Length = 486

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|167563155|ref|ZP_02356071.1| inositol-5-monophosphate dehydrogenase [Burkholderia oklahomensis
           EO147]
 gi|167570339|ref|ZP_02363213.1| inositol-5-monophosphate dehydrogenase [Burkholderia oklahomensis
           C6786]
          Length = 486

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPVEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG KL GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPSMKVRDVIALSRQHGISGFPVV-EGPKLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVAEGTPLADAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|187478067|ref|YP_786091.1| inosine-5'-monophosphate dehydrogenase [Bordetella avium 197N]
 gi|115422653|emb|CAJ49179.1| inosine-5'-monophosphate dehydrogenase [Bordetella avium 197N]
          Length = 486

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 65/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIG-----IIHKNLSADQQAREVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG K+ GI+T  D+     +D     + +V
Sbjct: 95  DPVTVTPDMKVRDAIALQRQHGISGLPVV-EGGKVVGIVTNRDLRF---EDRLDQPLRNV 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPRERLVTMTEGATLDEAQTLMHKHRLERVLIVNDAFELRGLATVKDIVK 201


>gi|290980370|ref|XP_002672905.1| CBS-domain-containing protein [Naegleria gruberi]
 gi|284086485|gb|EFC40161.1| CBS-domain-containing protein [Naegleria gruberi]
          Length = 152

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 16/127 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF-----HK 278
           S   + +V     L   +  + E     + VV  ++  K+ G+I+E DI         HK
Sbjct: 15  SHSKLVVVTPETTLDKCLMAMVENDVRHLVVVSSEDNGKIVGLISERDIRLAIGSPLIHK 74

Query: 279 DLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           D++               +M KN   + E+  +  A +++R   I  L +V+D    +G+
Sbjct: 75  DMDIKKEIDEFSKQVASSIMTKNVFTVKENDSILEAAKIMRVSRIGCLPIVNDADSIVGV 134

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 135 ITRSDML 141


>gi|228951220|ref|ZP_04113332.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
 gi|229078031|ref|ZP_04210639.1| CBS domain protein [Bacillus cereus Rock4-2]
 gi|228705270|gb|EEL57648.1| CBS domain protein [Bacillus cereus Rock4-2]
 gi|228808418|gb|EEM54925.1| CBS domain protein [Bacillus thuringiensis serovar kurstaki str.
           T03a001]
          Length = 132

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 1   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 60  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 110


>gi|229149060|ref|ZP_04277301.1| CBS domain protein [Bacillus cereus m1550]
 gi|228634259|gb|EEK90847.1| CBS domain protein [Bacillus cereus m1550]
          Length = 147

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   + +     + S   +    +   + +A   + E+  G + VV E +++ G++T+ D
Sbjct: 3   KKEEIIMTRVRDLMSTHIVHCTPLD-NVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRD 60

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +       K   +  + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG+
Sbjct: 61  LVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGM 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 LALGDL 125



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 10  TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 66


>gi|126665476|ref|ZP_01736458.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
 gi|126630104|gb|EBA00720.1| hypothetical protein MELB17_22825 [Marinobacter sp. ELB17]
          Length = 685

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 57/139 (41%), Gaps = 8/139 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--- 261
            V         +    S ++              L +A  I++E     + +++      
Sbjct: 197 AVSRREKSNQLMTSRVSRLISRKTVSA--PYTVRLQEAARIMTENSVSALLLMEGEGDQA 254

Query: 262 KLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +LKGIIT+ D+  R   + L +   + D+M +    I     +  AM  +  +N+  L V
Sbjct: 255 RLKGIITDRDLRIRAVTEALPSETPISDIMTEGLITIPASHYIFEAMLTMLHNNVHHLPV 314

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +DD +   G++   D++++
Sbjct: 315 MDDHE-VRGVIALSDIVKY 332


>gi|91204120|emb|CAJ71773.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 172

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIK 291
           K      D    L    +  V VVDE  ++ G+++E D+ +     K L  ++ E++M K
Sbjct: 55  KRNTLGRDLTVKLLSGMYSGVPVVDEKGRVIGVVSEFDLLKVIQAGKKLEQVTAEEIMTK 114

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            P  + ED+ +   + L+ +HNI  + VV +    +GI+   D+L
Sbjct: 115 TPVCVKEDSSIEEIIDLMTKHNIIRVPVVRNDM-LVGIISRCDIL 158



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 28/62 (45%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F K+   +  +DVM K       +TL       L     S + VVD+  + IG+V   DL
Sbjct: 34  FIKEERIMLAKDVMNKIVVAAKRNTLGRDLTVKLLSGMYSGVPVVDEKGRVIGVVSEFDL 93

Query: 336 LR 337
           L+
Sbjct: 94  LK 95



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 24/65 (36%), Gaps = 1/65 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           + G      +       +   VK    + + I ++++     V VV     L GII+  D
Sbjct: 98  QAGKKLEQVTAEEIMTKTPVCVKEDSSIEEIIDLMTKHNIIRVPVVRNDM-LVGIISRCD 156

Query: 272 IFRNF 276
           I  + 
Sbjct: 157 ILSSM 161


>gi|89073115|ref|ZP_01159654.1| inositol-5-monophosphate dehydrogenase [Photobacterium sp. SKA34]
 gi|89051068|gb|EAR56525.1| inositol-5-monophosphate dehydrogenase [Photobacterium sp. SKA34]
          Length = 487

 Score = 79.9 bits (196), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI L +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMVSASMDTVTEGRLAIGLAQEGGIGFIHKNMSIEQQADQVRMVKKFEAGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   +  +  F    VV +  +L GIIT  D+   F  DL+  +VE+VM 
Sbjct: 98  VTVKPTATIADVKRLTDQNGFAGYPVVTDSNELVGIITGRDVR--FVTDLSK-TVEEVMT 154

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     E         +++QH +  +++VDD  +  G++   D  + 
Sbjct: 155 SKADLASAKEGASREEVEAIMQQHRVEKVLLVDDEFRLKGMITAKDFQKA 204


>gi|161525893|ref|YP_001580905.1| RpiR family transcriptional regulator [Burkholderia multivorans
           ATCC 17616]
 gi|221202482|ref|ZP_03575513.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD2M]
 gi|221208061|ref|ZP_03581066.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD2]
 gi|160343322|gb|ABX16408.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           ATCC 17616]
 gi|221171964|gb|EEE04406.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD2]
 gi|221177655|gb|EEE10071.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Burkholderia multivorans CGD2M]
          Length = 282

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVAEAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGPQDVVVAISNTGRTRDIVDAARAALACGAKVVAIT-HSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|30260868|ref|NP_843245.1| CBS domain-containing protein [Bacillus anthracis str. Ames]
 gi|47526004|ref|YP_017353.1| CBS domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49183711|ref|YP_026963.1| CBS domain-containing protein [Bacillus anthracis str. Sterne]
 gi|165872470|ref|ZP_02217104.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167635986|ref|ZP_02394293.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|167641349|ref|ZP_02399601.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|170689129|ref|ZP_02880327.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|177654736|ref|ZP_02936524.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190568830|ref|ZP_03021733.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|227816408|ref|YP_002816417.1| CBS domain protein [Bacillus anthracis str. CDC 684]
 gi|229602165|ref|YP_002865315.1| CBS domain protein [Bacillus anthracis str. A0248]
 gi|254686651|ref|ZP_05150510.1| CBS domain protein [Bacillus anthracis str. CNEVA-9066]
 gi|254725865|ref|ZP_05187647.1| CBS domain protein [Bacillus anthracis str. A1055]
 gi|254753199|ref|ZP_05205235.1| CBS domain protein [Bacillus anthracis str. Vollum]
 gi|254757113|ref|ZP_05209141.1| CBS domain protein [Bacillus anthracis str. Australia 94]
 gi|30254317|gb|AAP24731.1| CBS domain protein [Bacillus anthracis str. Ames]
 gi|47501152|gb|AAT29828.1| CBS domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49177638|gb|AAT53014.1| CBS domain protein [Bacillus anthracis str. Sterne]
 gi|164711795|gb|EDR17338.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167510740|gb|EDR86134.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|167528658|gb|EDR91418.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|170666877|gb|EDT17642.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|172080550|gb|EDT65635.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190560067|gb|EDV14049.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|227002888|gb|ACP12631.1| CBS domain protein [Bacillus anthracis str. CDC 684]
 gi|229266573|gb|ACQ48210.1| CBS domain protein [Bacillus anthracis str. A0248]
          Length = 139

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  L  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 67  KITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|331091319|ref|ZP_08340159.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           2_1_46FAA]
 gi|330404480|gb|EGG84024.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           2_1_46FAA]
          Length = 484

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D  T  +++ 
Sbjct: 96  DPFYLSPEHTLADANELMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDF-TKKIKES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A Q+L +     L +VD      G++   D+
Sbjct: 152 MTSEGLITAPEGITLEEAKQILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|167571236|ref|ZP_02364110.1| transcriptional regulator, RpiR family protein [Burkholderia
           oklahomensis C6786]
          Length = 302

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A++ +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNNLSATSVADAIDLLSRAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++  +D+++ +S +G + ++      A      +++IT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGANDVVVAISNTGRTRDIVDAARAALACGAKVVSIT-HSHSPLAQL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L      E+     +P TS +  LAIGD LA+ +   R 
Sbjct: 217 STVSLASNVAEETDVF--SPMTSRMSHLAIGDILAVGVALRRG 257


>gi|73667397|ref|YP_303413.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia canis str. Jake]
 gi|72394538|gb|AAZ68815.1| inosine-5'-monophosphate dehydrogenase [Ehrlichia canis str. Jake]
          Length = 485

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 66/171 (38%), Gaps = 10/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH-SGDSIP 231
             P  SA M       LAIAL +         +   P  K                 +  
Sbjct: 37  KIPLISAAMDTVTEAKLAIALAQHGGIGC--IHKNLPIDKQLLEVRKVKKYESWIVYNPI 94

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            V     L  A++I+ E  +  + VV   + G+ L GI+T  D+     K      V D+
Sbjct: 95  AVSPDDSLAVALSIMEEYSYSGIPVVTDTENGKLLVGILTNRDVRFIEDKGC---KVADI 151

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K +   + E      A++LL Q+    L+VVD+    +G++   D+ +F
Sbjct: 152 MTKDHLITVPEGIERADAIKLLHQYRKERLIVVDNNYCCVGLITVKDIEKF 202


>gi|94308961|ref|YP_582171.1| signal-transduction protein [Cupriavidus metallidurans CH34]
 gi|93352813|gb|ABF06902.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 146

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           +     +  A+ +++EK  G + V+ E QK+ GII+E D  R      +      V ++M
Sbjct: 19  IPPTATVYAALQLMAEKGIGALLVM-EQQKIVGIISERDYARKVILMQRTSRETLVREIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +  D      M L+ +H +  L V++  Q  +G++   DL+
Sbjct: 78  TTAVIYVRADQTTDECMALMTRHRLRHLPVMNSDQ-LLGMISIGDLV 123


>gi|325528561|gb|EGD05665.1| RpiR family transcriptional regulator [Burkholderia sp. TJI49]
          Length = 282

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVAEAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGPQDVVVAISNTGRTRDIVDAARAALACGAKVVAIT-HSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|288962996|ref|YP_003453290.1| transcriptional regulator [Azospirillum sp. B510]
 gi|288915262|dbj|BAI76746.1| transcriptional regulator [Azospirillum sp. B510]
          Length = 314

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/173 (26%), Positives = 69/173 (39%), Gaps = 7/173 (4%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    A + +      L  L     G L            A  GRV I G+G SG +  
Sbjct: 96  DSVASAAEKVLNRSIDALVRLR----GRLDTNALERAAAALARAGRVQIVGVGASGTVAL 151

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                L            A         +   D ++ +S +G+SDE+  +   AR     
Sbjct: 152 DAHHKLFRLLPQVSASTDAHLQAMAAATLGPGDALLAISKTGTSDEIFDVAAIARDGGAT 211

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +IAIT+     +A  ADI LT+  + ++  H   P  S + QLA+ DAL +A+
Sbjct: 212 VIAITASAT-PLAERADIRLTVDVDEDTAVH--TPMASRLAQLALVDALTVAV 261


>gi|153833537|ref|ZP_01986204.1| inosine-5'-monophosphate dehydrogenase [Vibrio harveyi HY01]
 gi|148870188|gb|EDL69129.1| inosine-5'-monophosphate dehydrogenase [Vibrio harveyi HY01]
          Length = 487

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEKQAAEVRKVKKFEAGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    V+ E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPEATIADVVALTEKHGFAGFPVITENNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              N   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 AKENLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|313496719|gb|ADR58085.1| CBS domain-containing protein [Pseudomonas putida BIRD-1]
          Length = 645

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
           +     +     PL +A+ ++ E++ G + VVD  +   GI T  D+ +       DL  
Sbjct: 183 AMRHPVVCSANTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDLRQVVATIDADLGA 242

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++  M   P  +        A   + + +I+ + +V + ++  G+V   DL
Sbjct: 243 A-IDRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENRRLCGVVSERDL 293



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++ +++P V   +T L  A++L+ +  +  ++VVD  +  IGI    DL
Sbjct: 176 NTPLGELAMRHPVVCSANTPLREAVRLMHEQQVGSIVVVDPQRYPIGIFTLRDL 229



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             H       +       DA   ++E+    V +V E ++L G+++E D+
Sbjct: 245 DRHMTAKPFYLPPQASAFDAAMAMTERHIAHVCLV-ENRRLCGVVSERDL 293


>gi|18313521|ref|NP_560188.1| hypothetical protein PAE2691 [Pyrobaculum aerophilum str. IM2]
 gi|18161061|gb|AAL64370.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 144

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
           +            + +A +I+++KR G + +V E  +L G+++E DI R   + ++    
Sbjct: 7   ARRHPITAPYNISIKEAASIMTKKRIGLLVLVRE-GRLFGVVSERDIIRAVAQGISPEEP 65

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  +    I  D  +  A +L+R+H +  L VV    +  G+V   D++
Sbjct: 66  ASLIATRGVVTIEADEDVIKAAKLMREHGVRHL-VVTKGGELYGVVSVRDIV 116



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +  ++P     +  +  A  ++ +  I +L++V +  +  G+V   D++R 
Sbjct: 1   MKIGVIARRHPITAPYNISIKEAASIMTKKRIGLLVLVRE-GRLFGVVSERDIIRA 55


>gi|121728012|ref|ZP_01681051.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674553|ref|YP_001218463.1| hypothetical protein VC0395_A2584 [Vibrio cholerae O395]
 gi|262167377|ref|ZP_06035085.1| transcriptional regulator RpiR family [Vibrio cholerae RC27]
 gi|121629715|gb|EAX62134.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146316436|gb|ABQ20975.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227012051|gb|ACP08261.1| Putative HTH-type transcriptional regulator yfeT [Vibrio cholerae
           O395]
 gi|262024179|gb|EEY42872.1| transcriptional regulator RpiR family [Vibrio cholerae RC27]
          Length = 282

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLREIADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|228474657|ref|ZP_04059388.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis SK119]
 gi|228271320|gb|EEK12688.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis SK119]
          Length = 290

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/191 (22%), Positives = 82/191 (42%), Gaps = 5/191 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT     L++N +V+   + +  + +   SL+ S    +  Q   A+ +I      + 
Sbjct: 77  KQVTPYNIKLVENESVESLKQKLYFQTKA--SLKQS-NHFIDHQTIDAICEIFKQAHTIF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G G S     +    L+  G     V         L    ++D ++ ++ SG   EL+
Sbjct: 134 LYGYGSSYVCALEFYQKLSRIGLNIQLVQDTHLLTTMLSTHNKNDCVVFITNSGEQSELQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           A++   + F++ +I ITS N + +A  +D+VL    E       ++ TT+   QL   D 
Sbjct: 194 AMVKVVKDFNLSMITITSSNNNSIAKDSDLVL-TYNEDYKNELCMSATTALFAQLYTIDI 252

Query: 189 LAIALLESRNF 199
           +      +RN+
Sbjct: 253 IFYR-FIARNY 262


>gi|254506697|ref|ZP_05118837.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus 16]
 gi|219550278|gb|EED27263.1| inosine-5'-monophosphate dehydrogenase [Vibrio parahaemolyticus 16]
          Length = 487

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAQMVHQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV +  +L GIIT  D+   F  DL+   VE VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTDNNELVGIITGRDVR--FVTDLSK-KVEVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVKEGATREEVQEKMHKARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|189424458|ref|YP_001951635.1| signal-transduction protein [Geobacter lovleyi SZ]
 gi|189420717|gb|ACD95115.1| putative signal-transduction protein with CBS domains [Geobacter
           lovleyi SZ]
          Length = 485

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 4/129 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               F      +              LI+   ++ +     + VV E +K  GI++  D+
Sbjct: 7   NQDTFYFIEVDLLCTRMPITCPPQTGLIEMAGLMQQHNISGIVVV-EDEKPVGIVSLRDL 65

Query: 273 FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 D + L   +V+D+M  +   I     L  A+  + + NI  L+VV+D     G+
Sbjct: 66  RNCVATDYHALATRTVQDLMQTDLITIRRHDYLFKAIFKMARFNIHRLVVVNDDGSLAGV 125

Query: 330 VHFLDLLRF 338
           +   DLLR 
Sbjct: 126 ITNSDLLRI 134


>gi|304315354|ref|YP_003850501.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588813|gb|ADL59188.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 313

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 43/212 (20%), Positives = 78/212 (36%), Gaps = 26/212 (12%)

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            SIP  A   E   ++  +    L +         G+  T   +  L  GD   I     
Sbjct: 40  ISIPQTATIKEAAEIMVKNKFRRLPITNPGTGKLQGIVTTMDILDFLGGGDKFKIL---- 95

Query: 197 RNFSENDF--YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
            N  +++F   V  P   + T              +  +     + DA+T++ E   G +
Sbjct: 96  DNKYDDNFLAAVNEPVKSIMTR------------DVIHITTRDSISDAVTMMLENSVGAL 143

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            VVD+  ++ GI++E D              ED M  +       T +  A +++ ++ +
Sbjct: 144 PVVDDEGRIAGIVSERDFVLLMAGVFIDEVTEDHMTPDVITTTPGTPIEGASKIMVRNRL 203

Query: 315 SVLMVVD--------DCQKAIGIVHFLDLLRF 338
             + VV         + +K +GIV   D+L F
Sbjct: 204 RRIPVVGEERRTPHPEDEKLVGIVTSTDILEF 235



 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 50/135 (37%), Gaps = 22/135 (16%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--------GQKLKGIITEGDIFRNF 276
           H    +     G P+  A  I+   R   + VV E         +KL GI+T  DI    
Sbjct: 177 HMTPDVITTTPGTPIEGASKIMVRNRLRRIPVVGEERRTPHPEDEKLVGIVTSTDILEFL 236

Query: 277 HKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            ++             +    V ++M +    +   T L    +++ +H I  L VVD  
Sbjct: 237 GRNQAFNSMKTNSAEEVLATPVTEIMEREVCTVTSSTTLGEVCEIMEKHGIGGLPVVDYG 296

Query: 324 QKAIGIVHFLDLLRF 338
               GI+   DLLR 
Sbjct: 297 N-LRGIITESDLLRA 310



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 286 EDVMI---KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
            DVM    K    I +   +  A +++ ++    L + +    K  GIV  +D+L
Sbjct: 29  GDVMTIAGKEVISIPQTATIKEAAEIMVKNKFRRLPITNPGTGKLQGIVTTMDIL 83



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L +   I+ +   G + VVD G  L+GIITE D+ R  
Sbjct: 262 MEREVCTVTSSTTLGEVCEIMEKHGIGGLPVVDYGN-LRGIITESDLLRAI 311


>gi|219668606|ref|YP_002459041.1| signal transduction protein with CBS domains [Desulfitobacterium
           hafniense DCB-2]
 gi|219538866|gb|ACL20605.1| putative signal transduction protein with CBS domains
           [Desulfitobacterium hafniense DCB-2]
          Length = 124

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 58/115 (50%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
                  V+   P+ + + I++EK+   + VV+E   L G++ + DIFR   +   + + 
Sbjct: 7   MEKEFVTVRETDPIENVLKIMTEKKVNGLPVVNEHNLLIGMVVKADIFRFMIQPGHIESC 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+ VM K+   +  D  +  A   L  ++I  + VV++  K +G+V   DLLR+
Sbjct: 67  PVDWVMAKDVVSVHPDESVREAADKLLSNHIVAMPVVENS-KVVGVVSVEDLLRY 120



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  VM K    + E   +   ++++ +  ++ L VV++    IG+V   D+ RF
Sbjct: 1   MRIGAVMEKEFVTVRETDPIENVLKIMTEKKVNGLPVVNEHNLLIGMVVKADIFRF 56


>gi|328953281|ref|YP_004370615.1| CBS domain containing protein [Desulfobacca acetoxidans DSM 11109]
 gi|328453605|gb|AEB09434.1| CBS domain containing protein [Desulfobacca acetoxidans DSM 11109]
          Length = 201

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLS 284
                  V     +++AI I+ E     + VV       G ++  D+++      L  ++
Sbjct: 7   MIRDAITVSPETSVLEAIKIMQELDIRHLPVV-RQGNFAGWLSSRDLYQVMLAAMLEEIT 65

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M  NP  +  +T L  A  L+R+H I  + V+   +K +G++  +DLL  
Sbjct: 66  VGEIMNTNPISVTPETGLEEAAHLIREHKIGGVPVL-SGRKLVGVLTVIDLLSA 118



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V  +MI++   +  +T +  A++++++ +I  L VV       G +   DL +
Sbjct: 1   MRVGKIMIRDAITVSPETSVLEAIKIMQELDIRHLPVV-RQGNFAGWLSSRDLYQ 54


>gi|289664279|ref|ZP_06485860.1| hypothetical protein XcampvN_14738 [Xanthomonas campestris pv.
           vasculorum NCPPB702]
 gi|289667405|ref|ZP_06488480.1| hypothetical protein XcampmN_02517 [Xanthomonas campestris pv.
           musacearum NCPPB4381]
          Length = 198

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +I+AI +++EK  G V V+D G +L GI++E D  R      +  +T SV  +M      
Sbjct: 1   MIEAIRLMAEKAIGAVLVMD-GPRLLGIVSERDYARKVVLRDRASSTTSVAGIMSAEVVT 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     +   MQL+       L VV++  +  G++   DL++ 
Sbjct: 60  VSPSDTVERCMQLMSDGRFRHLPVVENS-RVQGLISIGDLVKA 101



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/105 (18%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
           +      + + AIG  L +         SE D+                S        + 
Sbjct: 1   MIEAIRLMAEKAIGAVLVMDGPRLLGIVSERDYA--RKVVLRDRASSTTSVAGIMSAEVV 58

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V     +   + ++S+ RF  + VV E  +++G+I+ GD+ +  
Sbjct: 59  TVSPSDTVERCMQLMSDGRFRHLPVV-ENSRVQGLISIGDLVKAV 102


>gi|116781417|gb|ABK22092.1| unknown [Picea sitchensis]
          Length = 205

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   T  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + VV + +  +G+V   D++R 
Sbjct: 133 DIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRA 185



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  L +  +E ++     +E D+          +      D+M   + +  
Sbjct: 84  VKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLIT 143

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     ++ A+ ++++ R   + VV EG+ + G+++ GD+ R  
Sbjct: 144 VTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRAV 186


>gi|313116945|ref|YP_004038069.1| acyl dehydratase [Halogeometricum borinquense DSM 11551]
 gi|312294897|gb|ADQ68933.1| acyl dehydratase [Halogeometricum borinquense DSM 11551]
          Length = 307

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
                 +A   L EK  G + V        GIITE D+ +      DL+T SV + M   
Sbjct: 20  PETTAREAAVKLFEKEVGSLVVC-RNGSPVGIITEYDLTKLLAAGTDLDTTSVSEFMSDP 78

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              I  D  ++ A ++LR   I  L V D  +  +G++  +DL
Sbjct: 79  LITIEHDADISEAAKMLRAKQIEHLPVTDGDE-LVGVLAAVDL 120



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L ++ V +VM  + +    +T    A   L +  +  L+V       +GI+   DL + 
Sbjct: 2   LVSIPVSEVMTDSVETTTPETTAREAAVKLFEKEVGSLVVC-RNGSPVGIITEYDLTKL 59


>gi|320530487|ref|ZP_08031545.1| CBS domain pair [Selenomonas artemidis F0399]
 gi|320137320|gb|EFW29244.1| CBS domain pair [Selenomonas artemidis F0399]
          Length = 214

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
               +   +     L +A  ++ +  F  + VV E  +L G  T  D+ R          
Sbjct: 6   CMTKNPVAIAPDAGLGEAAKVMEKGGFRRLPVV-EHGRLVGFFTNRDLLRASPSAATTLD 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V DVM K+   + +   +  A  ++ +  I  + V+    K +GI+  
Sbjct: 65  RFEERTLLSKIKVADVMQKSVITVTDSMTIEEAALVMSREKIGGMPVLSSAGKLVGIISS 124

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 125 TDIFKA 130



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE+ M KNP  I  D  L  A +++ +     L VV +  + +G     DLLR 
Sbjct: 3   VENCMTKNPVAIAPDAGLGEAAKVMEKGGFRRLPVV-EHGRLVGFFTNRDLLRA 55



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 28/63 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            TL            S+  V     + +A  ++S ++ G + V+    KL GII+  DIF
Sbjct: 69  RTLLSKIKVADVMQKSVITVTDSMTIEEAALVMSREKIGGMPVLSSAGKLVGIISSTDIF 128

Query: 274 RNF 276
           + F
Sbjct: 129 KAF 131


>gi|307354738|ref|YP_003895789.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
 gi|307157971|gb|ADN37351.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
          Length = 162

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 58/146 (39%), Gaps = 36/146 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                  V+    + +A +IL ++R G + V+D G++L GI+TE D+             
Sbjct: 7   MTPDPVTVQADAKVSEAASILRKRRIGGIPVMD-GERLAGIVTETDLLSLLDVGELSDDL 65

Query: 274 ----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                 R    D++   + D+M  +   I E+  +  A +L+  
Sbjct: 66  WLPSPLEIIEIPIREFVNWEKTRKALTDISESPISDIMSTDVIYIDENAEIEEAAKLMLS 125

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
             I+ L VV    + +GIV   D++R
Sbjct: 126 EGIARLPVV-KSDRLVGIVTRQDIVR 150



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM  +P  +  D  ++ A  +LR+  I  + V+D  ++  GIV   DLL
Sbjct: 3   VKDVMTPDPVTVQADAKVSEAASILRKRRIGGIPVMD-GERLAGIVTETDLL 53


>gi|302864554|ref|YP_003833191.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315500847|ref|YP_004079734.1| signal transduction protein with cbs domains [Micromonospora sp.
           L5]
 gi|302567413|gb|ADL43615.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315407466|gb|ADU05583.1| putative signal transduction protein with CBS domains
           [Micromonospora sp. L5]
          Length = 139

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMI 290
               PL +A  ++ E   G V V D G  L G++T+ DI  R   +  D  T ++  ++ 
Sbjct: 16  SAETPLDEAARVMKESDIGDVVVTD-GATLAGMLTDRDIVVRAVAERADPGTTTIGSIIT 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +I +      A  L+R+ NI  ++V D  +K +GIV   DL
Sbjct: 75  REVVMIEQHCTANEAAALMRERNIRRVLVCDSDRKLVGIVSLGDL 119



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DVM +    +  +T L  A +++++ +I  ++V D      G++   D++
Sbjct: 2   FRVSDVMTRQVVYLSAETPLDEAARVMKESDIGDVVVTDGA-TLAGMLTDRDIV 54



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 26/63 (41%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + +++  C   +A  ++ E+    V V D  +KL GI++ GD+            + 
Sbjct: 74  TREVVMIEQHCTANEAAALMRERNIRRVLVCDSDRKLVGIVSLGDLAMQLDPHSALSDIS 133

Query: 287 DVM 289
           +  
Sbjct: 134 EAA 136


>gi|262196345|ref|YP_003267554.1| signal transduction protein with CBS domains [Haliangium ochraceum
           DSM 14365]
 gi|262079692|gb|ACY15661.1| putative signal transduction protein with CBS domains [Haliangium
           ochraceum DSM 14365]
          Length = 155

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 48/126 (38%), Gaps = 4/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                       S + +  V    P+  AI  + + ++ C  V+D G  L GI TE D  
Sbjct: 1   MRSIQKPIKDFLSDEPLAAVAPDDPVTAAIAAMKKSKWDCALVLD-GDTLVGIFTERDFL 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                   D     V DVM   P+ +     +  A+  +       + +VDD  KA+ ++
Sbjct: 60  YRVSAAQADPAATKVRDVMTAEPETLRPQDSIAYAINRMVVRGFRNVPIVDDDGKAVAVL 119

Query: 331 HFLDLL 336
              D++
Sbjct: 120 DVRDVM 125


>gi|255527310|ref|ZP_05394189.1| CBS domain containing protein [Clostridium carboxidivorans P7]
 gi|296185720|ref|ZP_06854129.1| CBS domain pair [Clostridium carboxidivorans P7]
 gi|255509000|gb|EET85361.1| CBS domain containing protein [Clostridium carboxidivorans P7]
 gi|296049848|gb|EFG89273.1| CBS domain pair [Clostridium carboxidivorans P7]
          Length = 142

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 228 DSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
            +  +V +     +  A  ++ +   G + V + G K+ GI+T+ DI  R+  +  N   
Sbjct: 7   MTKCVVSLNAEDNVERAAQLMRKHNIGAIPVCN-GDKVIGIVTDRDIAIRSAAEGQNSQK 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V ++M  NP V      +  A +++ +  I  L +++     +G+V   D+
Sbjct: 66  QTVREIMSSNPVVGDPSMDIEDASRIMSERQIRRLPIIESNN-LVGVVSLGDI 117



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D+M K    +  +  +  A QL+R+HNI  + V  +  K IGIV   D+
Sbjct: 1   MKVQDIMTKCVVSLNAEDNVERAAQLMRKHNIGAIPVC-NGDKVIGIVTDRDI 52


>gi|197106135|ref|YP_002131512.1| CBS domain protein [Phenylobacterium zucineum HLK1]
 gi|196479555|gb|ACG79083.1| CBS domain protein [Phenylobacterium zucineum HLK1]
          Length = 139

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               + + +    + D    + +   G + V D G K++G++T+ DI             
Sbjct: 7   MSRDVEVARPQDTIQDVARKMRDIDTGAIPVCD-GDKVRGVVTDRDIVIRAVCEARSFET 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V DVM  + +   ED  +T A   + +  +  L+V+D  Q+ +GIV   D+ + G
Sbjct: 66  PVTDVMTADVEYCYEDDDITAAADKMAELQVRRLIVLDHDQRLVGIVSLGDIAQQG 121


>gi|119872130|ref|YP_930137.1| CBS domain-containing protein [Pyrobaculum islandicum DSM 4184]
 gi|119673538|gb|ABL87794.1| CBS domain containing membrane protein [Pyrobaculum islandicum DSM
           4184]
          Length = 280

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 57/128 (44%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G L +     S +     S+   +   PL + I +     FG + +VDE  +L GI TE 
Sbjct: 70  GSLYSDIYMKSVIEIGTRSVISARPETPLGEVIALFLRHNFGSMPIVDETGRLVGIFTEW 129

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ +   +      V DVM +   V+   + +   ++ +  +      +VD+  K I ++
Sbjct: 130 DVLKVASQLDFPHRVRDVMTRIVYVLTPYSTVMDVLEGITIYKFRRYPIVDETGKVIAML 189

Query: 331 HFLDLLRF 338
           H  D+LR+
Sbjct: 190 HAKDVLRY 197



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN- 275
                 +  +  ++        +++A+  +       + +V  G KL GIIT  DI    
Sbjct: 1   MFRRPVIEFATRNVVTASEKDKVLNAMKTMVNLDIRRLPIV-RGDKLIGIITMLDILDAI 59

Query: 276 ------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                        + D+   SV ++  ++      +T L   + L  +HN   + +VD+ 
Sbjct: 60  YSWISDKNTEGSLYSDIYMKSVIEIGTRSVISARPETPLGEVIALFLRHNFGSMPIVDET 119

Query: 324 QKAIGIVHFLDLLR 337
            + +GI    D+L+
Sbjct: 120 GRLVGIFTEWDVLK 133



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/125 (16%), Positives = 55/125 (44%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----L 280
               + ++     ++D +  ++  +F    +VDE  K+  ++   D+ R F  D     +
Sbjct: 148 MTRIVYVLTPYSTVMDVLEGITIYKFRRYPIVDETGKVIAMLHAKDVLRYFASDEVIEKI 207

Query: 281 NTLSVEDVMI-------KNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVH 331
              +VED++        K+P  +   +  +   ++ + ++++  + VV++     IG+V 
Sbjct: 208 KQGAVEDIVSNYAINIAKSPIFVAKPNDPVIDVVKRMLEYDVGGVPVVNEEGTAVIGMVT 267

Query: 332 FLDLL 336
              L+
Sbjct: 268 EKTLM 272



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V +   +N     E   +  AM+ +   +I  L +V    K IGI+  LD+L  
Sbjct: 1   MFRRPVIEFATRNVVTASEKDKVLNAMKTMVNLDIRRLPIV-RGDKLIGIITMLDILDA 58


>gi|81429251|ref|YP_396252.1| transcriptional regulator [Lactobacillus sakei subsp. sakei 23K]
 gi|78610894|emb|CAI55946.1| Putative transcriptional regulator with a sugarisomerase domain,
           RpiR family [Lactobacillus sakei subsp. sakei 23K]
          Length = 276

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 41/151 (27%), Positives = 64/151 (42%), Gaps = 3/151 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                  V  IK  + ++ I G+G SG+ G++    L   G  +  V  +        +I
Sbjct: 112 QADLDQLVSWIKTSQ-QLFIYGLGSSGYTGAEFGQRLTRMGIQATVVTESHMMLMTSRII 170

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            + DL+I LS SG+++E+   +  AR       AITS   S +A  +D  LTL  E    
Sbjct: 171 NKTDLVIGLSNSGNTEEVNQAVQNARENGAKTAAITSGTDSPLAAASD--LTLFVEDSIG 228

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
                   S      + D LA+ LLE   ++
Sbjct: 229 FASARFVNSQFALTYVIDILAMLLLEDEQYN 259


>gi|85703687|ref|ZP_01034791.1| CBS domain protein [Roseovarius sp. 217]
 gi|85672615|gb|EAQ27472.1| CBS domain protein [Roseovarius sp. 217]
          Length = 144

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           +     + +A  IL+E+R G + V  +G+ + GII+E DI R+         T +V ++M
Sbjct: 18  ITPTTKVSEAAQILAERRIGGLVVSRDGETVDGIISERDIVRSLAVRGVVCMTETVSEMM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +NP            +  +       + VV +  K +GIV   D+++  +
Sbjct: 78  TRNPVCCSRQDTSDAVLARMTDGRFRHMPVV-EAGKLVGIVTIGDVVKARL 127



 Score = 42.6 bits (99), Expect = 0.090,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I   T ++ A Q+L +  I  L+V  D +   GI+   D++R
Sbjct: 16  ITITPTTKVSEAAQILAERRIGGLVVSRDGETVDGIISERDIVR 59



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 32/81 (39%), Gaps = 3/81 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDA-ITILSEKRFGCVAVVDEGQKLKGIITEG 270
            +  +      V       P+        DA +  +++ RF  + VV E  KL GI+T G
Sbjct: 62  AVRGVVCMTETVSEMMTRNPVCCSRQDTSDAVLARMTDGRFRHMPVV-EAGKLVGIVTIG 120

Query: 271 DIFRN-FHKDLNTLSVEDVMI 290
           D+ +    +     +  + MI
Sbjct: 121 DVVKARLEELSMEKTALEGMI 141


>gi|229553480|ref|ZP_04442205.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538622|ref|YP_003173121.1| transcriptional regulator RpiR family [Lactobacillus rhamnosus Lc
           705]
 gi|229313105|gb|EEN79078.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus
           LMS2-1]
 gi|257150298|emb|CAR89270.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus Lc
           705]
          Length = 277

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T  G     ++++  A +++      +++LE +L      Q   +V  +     +V + G
Sbjct: 78  TTNGDVETNDNSLASARKTV---NANIAALEGTLSFLTQDQIDHSVNLLLDA-NKVALFG 133

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G S  I      T           +           +T  D+ IV+S +G+  ++ A++
Sbjct: 134 LGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTEHDVAIVISHTGNDTDILALV 193

Query: 132 YYARRFSIPLIAITSENKSVVACH-ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
                  +P+IA+TS   S +A   +D+  ++ ++       L   TS   QLAI D L 
Sbjct: 194 DLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRSDALISMTS---QLAIFDVLY 250

Query: 191 IALLESRNF-SENDFYVLHPG 210
             L+      SE    ++H  
Sbjct: 251 TELVRRMGLQSEKTIALVHQA 271


>gi|221201168|ref|ZP_03574208.1| glucokinase [Burkholderia multivorans CGD2M]
 gi|221206379|ref|ZP_03579392.1| glucokinase [Burkholderia multivorans CGD2]
 gi|221173688|gb|EEE06122.1| glucokinase [Burkholderia multivorans CGD2]
 gi|221179018|gb|EEE11425.1| glucokinase [Burkholderia multivorans CGD2M]
          Length = 642

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 68/193 (35%), Gaps = 8/193 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLLMIDILA 591

Query: 191 IALLESRNFSEND 203
           + +   R  S ND
Sbjct: 592 VGVAIRRA-SPND 603


>gi|213407912|ref|XP_002174727.1| CBS domain-containing protein [Schizosaccharomyces japonicus
           yFS275]
 gi|212002774|gb|EEB08434.1| CBS domain-containing protein [Schizosaccharomyces japonicus
           yFS275]
          Length = 655

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 56/135 (41%), Gaps = 12/135 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   + +     +    S      V+    + +A  +++ KR  C+ VVDE Q+L GIIT
Sbjct: 59  PKRNVRSHSDPTTVASASLAPALTVQTHTLVSEACQLMAAKREECLLVVDEAQQLTGIIT 118

Query: 269 EGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH-NISVLMVVDD-- 322
             D+ R       D    +VE  M + P  I  DT    A+ L+ +H  I  L VV D  
Sbjct: 119 SLDVSRKCVGGGFDPRGSTVESFMTEGPICITSDTQFADALALMLEHDRI-YLPVVSDGT 177

Query: 323 -----CQKAIGIVHF 332
                    +GI+  
Sbjct: 178 DEGCEDGDVLGILDI 192



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 51/114 (44%), Gaps = 4/114 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLS 284
               LV +   +++A  ++++     V V+D    + GI T  DI  R     L+    S
Sbjct: 263 FEPVLVGVRTSVLEASQLMAQAEANAVLVMD-QGLVSGIFTSHDIVLRVVAAGLDPSKCS 321

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  +M  +P   L    ++ A++ + +   + L V+D+    +G+++   L + 
Sbjct: 322 VIRIMTPHPDCALVSLHISTALERMLEGGFNNLPVIDENDGIVGLLNITQLAQA 375



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            RN     +  +V    +     +   TL++ A QL+       L+VVD+ Q+  GI+  
Sbjct: 60  KRNVRSHSDPTTVASASLAPALTVQTHTLVSEACQLMAAKREECLLVVDEAQQLTGIITS 119

Query: 333 LDLLRF 338
           LD+ R 
Sbjct: 120 LDVSRK 125



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 37/114 (32%), Gaps = 4/114 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+ +D  +      L         +M       LV +   +  A+  + E  F  + V+D
Sbjct: 301 FTSHDIVLRVVAAGLDPSKCSVIRIMTPHPDCALVSLH--ISTALERMLEGGFNNLPVID 358

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           E   + G++    + +    D      +D       +  E+     A   +  +
Sbjct: 359 ENDGIVGLLNITQLAQAIVADQEPNGDKD--HDENALTPENLKAVEAENAMYDN 410


>gi|297582528|ref|YP_003698308.1| RpiR family transcriptional regulator [Bacillus selenitireducens
           MLS10]
 gi|297140985|gb|ADH97742.1| transcriptional regulator, RpiR family [Bacillus selenitireducens
           MLS10]
          Length = 284

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 64/180 (35%), Gaps = 16/180 (8%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S M  +++Q    +              L      Q   A++++     R+   G+G S 
Sbjct: 99  SKMTTNSMQTIKET-----------ADILNIYDLTQVIEALDQV----NRIHFFGVGASN 143

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            I        +     +        +   +      D++  +S+SG + E+  IL  A  
Sbjct: 144 IIAQDAQLKFSRINKHTTAFADFHIASMHVANSGPGDVVFGISFSGETKEVLKILELANE 203

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                IA+T    S +A  A I L      +      + T+S I QL + D L +++  +
Sbjct: 204 KGATTIALTKFGPSTIAKTASICLRTS-ASKETTFRSSATSSRIAQLHVLDILFMSVANA 262


>gi|170733347|ref|YP_001765294.1| inosine 5'-monophosphate dehydrogenase [Burkholderia cenocepacia
           MC0-3]
 gi|169816589|gb|ACA91172.1| inosine-5'-monophosphate dehydrogenase [Burkholderia cenocepacia
           MC0-3]
          Length = 486

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-- 290
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGPQLVGIVTNRDLR--FETRLDE-PVKSIMTLR 154

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|302391319|ref|YP_003827139.1| signal transduction protein with CBS domains [Acetohalobium
           arabaticum DSM 5501]
 gi|302203396|gb|ADL12074.1| putative signal transduction protein with CBS domains
           [Acetohalobium arabaticum DSM 5501]
          Length = 300

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 49/103 (47%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
             G  + +A  I+  ++   + ++++ Q+L GII+  DI     +D     + D+M  + 
Sbjct: 32  NPGHKIKNAKEIMRLRKISGIPIINDDQELVGIISIDDIVTALEEDKLDEKLIDLMSTDL 91

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I  +  +T A++  ++H    L V+D   +  GI+   D+ 
Sbjct: 92  ITITPNVTITEALRKFKKHQYGRLPVIDSSNRLQGIITPGDIT 134



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 32/57 (56%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+V+D+M+ +   +     +  A +++R   IS + +++D Q+ +GI+   D++  
Sbjct: 17  DLTVKDIMVDDVITLNPGHKIKNAKEIMRLRKISGIPIINDDQELVGIISIDDIVTA 73



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 26/50 (52%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +     + +A+    + ++G + V+D   +L+GIIT GDI     K++  
Sbjct: 94  ITPNVTITEALRKFKKHQYGRLPVIDSSNRLQGIITPGDITSKLLKEVKK 143


>gi|239933402|ref|ZP_04690355.1| hypothetical protein SghaA1_34575 [Streptomyces ghanaensis ATCC
           14672]
 gi|291441768|ref|ZP_06581158.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291344663|gb|EFE71619.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 219

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
             D++  V+ G P  +   +L +     V VVD   +  G+++E D+ +           
Sbjct: 10  MSDAVVRVQRGTPFKEIAHLLQDYDITAVPVVDAEDRPVGVVSEADLLQKMWGGDPDEAV 69

Query: 277 ---------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                        + +    +M        ED  +  A + + +H I  L+VVD+  + I
Sbjct: 70  GHGEGPRPAGAKASAIDAAGLMTSPAVCAREDWSVVDAARAMARHGIKRLLVVDEGGRLI 129

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 130 GLVSRSDLLR 139



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V D+M      +   T       LL+ ++I+ + VVD   + +G+V   DLL+ 
Sbjct: 1   MKHQKVGDLMSDAVVRVQRGTPFKEIAHLLQDYDITAVPVVDAEDRPVGVVSEADLLQK 59



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P G   +    A  +          +    ++DA   ++      + VVDEG +L G++
Sbjct: 76  RPAGAKASAIDAAGLMTSPAVCA---REDWSVVDAARAMARHGIKRLLVVDEGGRLIGLV 132

Query: 268 TEGDIFRNFHK 278
           +  D+ R F +
Sbjct: 133 SRSDLLRVFLR 143


>gi|111223347|ref|YP_714141.1| hypothetical protein FRAAL3940 [Frankia alni ACN14a]
 gi|111150879|emb|CAJ62583.1| conserved hypothetical protein [Frankia alni ACN14a]
          Length = 132

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
                  V+    +  A  ++ E   G + V + G    G++T+ DI        +D +T
Sbjct: 1   MTRDPATVRADDTVDKAARLMREIDAGVIVVTENGGGAAGVLTDRDITVRVVAEDRDPHT 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V DV   + + +  +TL+  A +L+R   +  L VVDD  + +G+V   DL R G
Sbjct: 61  TPVRDVASGDIETVTSNTLIDDAAELMRLRAVRRLPVVDD-NRIVGVVSLGDLAREG 116


>gi|76802885|ref|YP_330980.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558750|emb|CAI50343.1| CBS domain protein 1 [Natronomonas pharaonis DSM 2160]
          Length = 381

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 1/115 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +  ++P V     + +   +L E       V  E   L G+IT+  I      +L+ L+V
Sbjct: 67  TRSNVPQVNREDGVREVARMLVEGDTKVAPVF-EHGDLWGVITDNAILNAVLDNLDVLTV 125

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +  +    + ED  L  A+  LR++ IS L VV+D  K  GI+   D+  F +
Sbjct: 126 DQIHTEEVVTLREDDTLGKAINHLRENAISRLPVVNDNGKLTGIITTHDIADFAV 180



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 18/134 (13%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------- 272
           D +H+ + + L +    L  AI  L E     + VV++  KL GIIT  DI         
Sbjct: 126 DQIHTEEVVTL-REDDTLGKAINHLRENAISRLPVVNDNGKLTGIITTHDIADFAVRKMD 184

Query: 273 ------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQ 324
                  R   + +  L V D M    + I  +  +  A++ + +++   L+V   D+ +
Sbjct: 185 RQRTGDRRGDTERMLDLPVYDAMNSPVQTISAEASVRDAVERMFENDFGGLVVTPDDNDE 244

Query: 325 KAIGIVHFLDLLRF 338
              GI+   D+LR 
Sbjct: 245 FVAGILTKTDVLRA 258



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 23/53 (43%), Gaps = 2/53 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNF 276
               +  +     + DA+  + E  FG + V   D  + + GI+T+ D+ R  
Sbjct: 207 MNSPVQTISAEASVRDAVERMFENDFGGLVVTPDDNDEFVAGILTKTDVLRAL 259


>gi|11499385|ref|NP_070624.1| hypothetical protein AF1796 [Archaeoglobus fulgidus DSM 4304]
 gi|7388512|sp|O28478|Y1796_ARCFU RecName: Full=Uncharacterized protein AF_1796
 gi|2648766|gb|AAB89472.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 183

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 15/187 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR +      + +L + +  E   +    ++  ++    + + G G+SG+I    A  L 
Sbjct: 2   LRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARS----IFVIGAGRSGYIAKAFAMRLM 57

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + V            IT  D+++ +S SG +  +  I   A+     L+A+T +
Sbjct: 58  HLGYTVYVVGETVTP-----RITDQDVLVAISGSGETTSVVNISKKAKDIGSKLVAVTGK 112

Query: 148 NKSVVACHADIVLTL----PKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSE 201
             S +A  AD+V+ +     +E +     LAP  +      +   DAL   ++  ++ +E
Sbjct: 113 RDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTE 172

Query: 202 NDFYVLH 208
            D    H
Sbjct: 173 KDLEARH 179


>gi|323935738|gb|EGB32052.1| gutQ protein [Escherichia coli E1520]
          Length = 85

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 4/76 (5%)

Query: 19 MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
          M  + +    ++++ E +      S L   L   F  A   I   +G+VV++GIGKSGHI
Sbjct: 1  MSEALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIILHCEGKVVVSGIGKSGHI 56

Query: 79 GSKLASTLASTGTPSF 94
          G K+A+TLASTGTP+F
Sbjct: 57 GKKIAATLASTGTPAF 72


>gi|297538327|ref|YP_003674096.1| inosine-5'-monophosphate dehydrogenase [Methylotenera sp. 301]
 gi|297257674|gb|ADI29519.1| inosine-5'-monophosphate dehydrogenase [Methylotenera sp. 301]
          Length = 486

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +   +     +  +    S V+   +  
Sbjct: 40  NIPLLSAAMDTVTEAPLAIALAQEGGLGFIHKNMTAMKQAAHVARVKRFESGVV---NDP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + D + +    +   + VVD   K+ GI+T  D+   F  +L+   ++++M 
Sbjct: 97  ITIQSHMTVRDVLELNHMHKISGIPVVD-NGKIVGIVTNRDLR--FETNLDQ-PIKNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E       ++LL QH +  ++V+D      G++   D+ +
Sbjct: 153 PRSKLVTVREGAPKDEVIRLLHQHRLERVLVIDAEDTLKGLITVKDIQK 201


>gi|309791094|ref|ZP_07685629.1| isocitrate dehydrogenase, NADP-dependent [Oscillochloris trichoides
           DG6]
 gi|308226878|gb|EFO80571.1| isocitrate dehydrogenase, NADP-dependent [Oscillochloris trichoides
           DG6]
          Length = 586

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G ++   +       ++  V     + +    +  +    V V+ + Q   GI+T  DI 
Sbjct: 457 GRVYPRETVGAVMTRTVVAVPGDASIREVSQHMQARGIHSVVVLPDAQGQWGIMTMRDIL 516

Query: 274 R---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +      KD+N + V+ V  +       D  +    QL+   NI  ++V +D +  IGI+
Sbjct: 517 KKIAAIGKDINGMKVDAVTTRPLITTTPDMSIVACAQLMLDKNIRRVVVTEDDE-PIGII 575

Query: 331 HFLDL 335
              D+
Sbjct: 576 SDTDI 580



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 28/67 (41%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R   +     +V  VM +    +  D  +    Q ++   I  ++V+ D Q   GI+ 
Sbjct: 452 LKRAEGRVYPRETVGAVMTRTVVAVPGDASIREVSQHMQARGIHSVVVLPDAQGQWGIMT 511

Query: 332 FLDLLRF 338
             D+L+ 
Sbjct: 512 MRDILKK 518


>gi|282874971|ref|ZP_06283846.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis SK135]
 gi|281296299|gb|EFA88818.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis SK135]
 gi|329729453|gb|EGG65856.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU144]
 gi|329735947|gb|EGG72223.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU028]
 gi|329736915|gb|EGG73177.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU045]
          Length = 182

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+S+L    + ++      +     R+   G G+SG + +  A  L   G  ++ V 
Sbjct: 11  LEELDSTLSQVDNTEYERFANDVIGAD-RIFTAGKGRSGFVANSFAMRLNQLGKNAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+  +S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSEGAKIVLLTTNAESPIGNLAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 125 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSVVLPLMDAFHISEKTMQENH 178


>gi|242372795|ref|ZP_04818369.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis
           M23864:W1]
 gi|242349494|gb|EES41095.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis
           M23864:W1]
          Length = 189

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE +L       +      +     R+ + G G+SG + +  A  L   G  +F V 
Sbjct: 18  LEELEHTLSHVDDTDYERFTNDVIGAD-RIFVAGKGRSGFVANSFAMRLNQLGEDAFVVG 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ IT++ +S +   A+
Sbjct: 77  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLADKAKSIGAKVVLITTKAESSIGELAE 131

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            ++ LP   +    G   P  S   Q  L   D++ I L+++ +  E      H
Sbjct: 132 TIVELPAGTKHEVEGSKQPLGSLFEQASLVFLDSVVIPLMDAFHIDEETMQKNH 185


>gi|217076999|ref|YP_002334715.1| CBS domain containing membrane protein [Thermosipho africanus
           TCF52B]
 gi|217036852|gb|ACJ75374.1| CBS domain containing membrane protein [Thermosipho africanus
           TCF52B]
          Length = 147

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------------FHKD 279
           V     +   + ILS ++   V V+DE  K+ G I+E DI R              F  D
Sbjct: 14  VLEDESVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAALPSYFSLLQTASFIPD 73

Query: 280 LNTL----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           LN            +V ++M K    I E T L  A  L+ +H++ +L VVD+  K +G+
Sbjct: 74  LNQFVRNLKKISNRAVSEIMTKPAITIKESTPLLHAADLMIRHSLKILPVVDEDDKLLGV 133

Query: 330 VHFLDLLRF 338
           +  + +L  
Sbjct: 134 ITRMKILEA 142



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 34/58 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V+D  I++   +LED  ++  +++L +  ++ + V+D+  K +G +   D++R  +
Sbjct: 1   MKVKDFYIRDITAVLEDESVSRVLKILSRQQVTGVPVIDEDYKVVGFISENDIIRAAL 58



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 22/54 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                  +K   PL+ A  ++       + VVDE  KL G+IT   I     ++
Sbjct: 93  MTKPAITIKESTPLLHAADLMIRHSLKILPVVDEDDKLLGVITRMKILEAVSRE 146


>gi|261409413|ref|YP_003245654.1| RpiR family transcriptional regulator [Paenibacillus sp. Y412MC10]
 gi|329923201|ref|ZP_08278687.1| transcriptional regulator, RpiR family [Paenibacillus sp. HGF5]
 gi|261285876|gb|ACX67847.1| transcriptional regulator, RpiR family [Paenibacillus sp. Y412MC10]
 gi|328941527|gb|EGG37817.1| transcriptional regulator, RpiR family [Paenibacillus sp. HGF5]
          Length = 278

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 68/191 (35%), Gaps = 6/191 (3%)

Query: 7   HFKSVTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
             +     G+  ++ N ++   ++++      + S+  +++         AV  +   K 
Sbjct: 74  DLQEPLATGYQDIRPNDSISAIIQNVSN--NNIQSIRDTMKIMEEGMVEEAVLALDQSK- 130

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  IG                            ++T DD  + +S+SG +D
Sbjct: 131 RIFMFGVGASNLIGMDAQQKFLRINKVCISFPDPHVQLTSAVLLTPDDAAVCISYSGETD 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E+      A+      I IT    S ++   DI L           G    +S I QL +
Sbjct: 191 EVIRAAAIAKEKGCKTIGITKYGDSTLSRSVDIPLYTSSTENEIRSGA--MSSRITQLNL 248

Query: 186 GDALAIALLES 196
            D L + +   
Sbjct: 249 IDILYLGVASR 259


>gi|170690727|ref|ZP_02881893.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
 gi|170143976|gb|EDT12138.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
          Length = 286

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 74/200 (37%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGMPYSSAAIARSDDVQTLMDKVGEAAVDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A         S     A       GM+   D+   +
Sbjct: 128 LSSAR-RVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDAHLQRLYAGMMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIALLLRVPSPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|134294992|ref|YP_001118727.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia vietnamiensis G4]
 gi|134138149|gb|ABO53892.1| glucokinase [Burkholderia vietnamiensis G4]
          Length = 642

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 68/193 (35%), Gaps = 7/193 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLVMIDILA 591

Query: 191 IALLESRNFSEND 203
           + +   R  +  +
Sbjct: 592 VGVAIRRASTAGE 604


>gi|71276203|ref|ZP_00652482.1| IMP dehydrogenase [Xylella fastidiosa Dixon]
 gi|71900462|ref|ZP_00682593.1| IMP dehydrogenase [Xylella fastidiosa Ann-1]
 gi|170730695|ref|YP_001776128.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa M12]
 gi|71162964|gb|EAO12687.1| IMP dehydrogenase [Xylella fastidiosa Dixon]
 gi|71729768|gb|EAO31868.1| IMP dehydrogenase [Xylella fastidiosa Ann-1]
 gi|167965488|gb|ACA12498.1| IMP dehydrogenase [Xylella fastidiosa M12]
          Length = 485

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S+V  H+ ++   + L            P  SA M       LAI + +    
Sbjct: 8   ALTYDDVSLVPSHSTVLPKDVNLETRLTRNIRLKLPILSAAMDTVTEARLAIVMAQLGGI 67

Query: 200 S--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +  +     ++  +    S V+        V     + D + +   K    V VV
Sbjct: 68  GIIHKNLTIEQQVAEVTKVKKYESGVIR---DPITVDPETSIRDVLALTRAKNISGVPVV 124

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNIS 315
           D+  +L G++T  D+   F  +L+   V  +M K      + E       +QLL +H I 
Sbjct: 125 DK-GQLIGLVTHRDMR--FESELDD-PVRHIMTKKEALVTVKEGADSQEVLQLLHKHRIE 180

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            ++VV+D  +  G++   D+ + 
Sbjct: 181 KILVVNDAFELRGLITVKDIQKK 203


>gi|326802798|ref|YP_004320616.1| transcriptional regulator, RpiR family [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326650468|gb|AEA00651.1| transcriptional regulator, RpiR family [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 290

 Score = 79.6 bits (195), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 70/167 (41%), Gaps = 1/167 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + +  ++ +L       F  A+ KI + K RV I GIG S  +     S L   G P+ +
Sbjct: 112 KSIRGMQDTLNLLDRNDFEEAITKIISAK-RVSIYGIGTSSSVALDFVSRLIRIGIPATY 170

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                     +   T DDL+I +S SG++ +    L  A+   +  IA+T+     +  +
Sbjct: 171 YSDIHLQQLAVHSYTEDDLLIGISHSGATMDAVDTLKLAKSRGVQTIALTNYKSHFINEY 230

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           ADI L       S       +  +++ L     + I L +  ++++ 
Sbjct: 231 ADISLLTGDNETSLYSETMVSRISLLTLIDMLYIGIILSDYDHYTQQ 277


>gi|332358281|gb|EGJ36107.1| CBS domain protein [Streptococcus sanguinis SK355]
          Length = 218

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 53.4 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|116782877|gb|ABK22702.1| unknown [Picea sitchensis]
          Length = 205

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   T  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + VV + +  +G+V   D++R 
Sbjct: 133 DIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRA 185



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  L +  +E ++     +E D+          +      D+M   + +  
Sbjct: 84  VKSMTQHNVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLIT 143

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     ++ A+ ++++ R   + VV EG+ + G+++ GD+ R  
Sbjct: 144 VTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRAV 186


>gi|145591695|ref|YP_001153697.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145283463|gb|ABP51045.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 142

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + D   I++E++ G V +VD+ Q     G+++E DI +    +L+    V+++M  
Sbjct: 16  PDARIKDIAKIMAERKIGLVVIVDKNQPDYAVGVVSEKDIVKAVANNLDLNRPVKEIMTS 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +     +    +++RQHNI   +VV    K  G++   DL+
Sbjct: 76  PVITVEGSEPVWTVARIMRQHNIRH-VVVTRGGKLYGVISIRDLV 119



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +  E V  K P     D  +    +++ +  I ++++VD  Q   A+G+V   D+++ 
Sbjct: 1   MKAEVVARKPPITATPDARIKDIAKIMAERKIGLVVIVDKNQPDYAVGVVSEKDIVKA 58


>gi|160881684|ref|YP_001560652.1| RpiR family transcriptional regulator [Clostridium phytofermentans
           ISDg]
 gi|160430350|gb|ABX43913.1| transcriptional regulator, RpiR family [Clostridium phytofermentans
           ISDg]
          Length = 284

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/197 (17%), Positives = 75/197 (38%), Gaps = 5/197 (2%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRG--LSSLESSLQGELSFQFHCAVEKI 60
           F        T   +++  + +    +++I  +     +++L  + +G         V+ I
Sbjct: 71  FLAQDIAVRTGSDYTINGSVSQDDDIQTICKKALAVDIAALTETFEGLNFEAVTKVVDMI 130

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
                +V   G+G SG I  +              +           +++  DL I+ S+
Sbjct: 131 SNA-NKVQFFGMGSSGVIALEAKMKFMRILPNVEHIADCHMQFMSAALLSSRDLAIIFSY 189

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGS+ +   I   A+     +++IT    S +A  +D+V  +P      P     +++++
Sbjct: 190 SGSTKDSIEIANLAKSNGCKVVSITRYVNSHLANISDVV--IPCGSNEGPLDGGASSTSM 247

Query: 181 MQLAIGDALAIALLESR 197
           +Q  I D L +      
Sbjct: 248 VQFYILDILYLLYFTKH 264


>gi|313893073|ref|ZP_07826650.1| CBS domain protein [Veillonella sp. oral taxon 158 str. F0412]
 gi|313442426|gb|EFR60841.1| CBS domain protein [Veillonella sp. oral taxon 158 str. F0412]
          Length = 151

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 50/136 (36%), Gaps = 27/136 (19%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDLNTLS 284
             +V    P+ D   +L +     V+VVD+  KL GII+EGD+       +    +N L 
Sbjct: 11  PVIVGKDAPISDVADLLVKYNLTAVSVVDDNNKLLGIISEGDLLYKKVRPHVPHYVNVLG 70

Query: 285 VE----------------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                                   ++M         D  +   + ++   ++  + VVD 
Sbjct: 71  ASIYYNGIGEYNAKFKKLLASHVHELMTDEVITTTPDKEVEEIVSVMLDQHLKNVPVVDK 130

Query: 323 CQKAIGIVHFLDLLRF 338
               +GI+   D+++ 
Sbjct: 131 DYHLVGILSRRDIIKL 146



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 35/58 (60%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +++VM K P ++ +D  ++    LL ++N++ + VVDD  K +GI+   DLL   +
Sbjct: 1   MKIQEVMNKYPVIVGKDAPISDVADLLVKYNLTAVSVVDDNNKLLGIISEGDLLYKKV 58



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + + ++++ ++    V VVD+   L GI++  DI +   KD
Sbjct: 106 PDKEVEEIVSVMLDQHLKNVPVVDKDYHLVGILSRRDIIKLIAKD 150


>gi|303325792|ref|ZP_07356235.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
 gi|302863708|gb|EFL86639.1| CBS domain protein/ACT domain protein [Desulfovibrio sp. 3_1_syn3]
          Length = 230

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 47/119 (39%), Gaps = 14/119 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     L+    +  +   G + VVD  + + G+I+  DI   F                
Sbjct: 14  VPPDASLLQCRKLFKDNHIGRLPVVDADKIVVGLISASDI-NAFAPQRTTGLEILEVLDI 72

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L     + +M  +P  I     +  A Q + +  ++ L VV+D +K +GI+   D+ + 
Sbjct: 73  LGETPAKQIMTVDPVTINYKGTVEQAAQRMIEKRVACLPVVNDEEKLVGILTEWDIFKA 131



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + D M  N   +  D  L    +L + ++I  L VVD  +  +G++   D+
Sbjct: 3   ILDWMKSNVISVPPDASLLQCRKLFKDNHIGRLPVVDADKIVVGLISASDI 53



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 10/125 (8%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
           V+++P +            + I +L + DA  I +      S +D     P    G   +
Sbjct: 11  VISVPPDASLLQCRKLFKDNHIGRLPVVDADKIVVGL---ISASDINAFAPQRTTGLEIL 67

Query: 219 CASDVMHSGDSIPL--VKIGC-----PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
              D++    +  +  V          +  A   + EKR  C+ VV++ +KL GI+TE D
Sbjct: 68  EVLDILGETPAKQIMTVDPVTINYKGTVEQAAQRMIEKRVACLPVVNDEEKLVGILTEWD 127

Query: 272 IFRNF 276
           IF+  
Sbjct: 128 IFKAL 132


>gi|294668959|ref|ZP_06734046.1| transcriptional regulator HexR [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309132|gb|EFE50375.1| transcriptional regulator HexR [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 283

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 68/173 (39%), Gaps = 7/173 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + +      L      L      +   A+  +   + R+   G+G SG +          
Sbjct: 96  KVLGNTAAALLGARRFLHE---AELENAIAMLTHAR-RIEFYGVGNSGIVAQDAQHKFFR 151

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +              +++  D+++V+S SG+S EL   +  A+     +IAIT   
Sbjct: 152 FGMSTVAYSDPHIQLMAASVLSDQDVVVVVSNSGASIELLDAVSTAKENGAAVIAIT-RM 210

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
            S +A  AD VL +    +S  +   P  S ++QLA+ D LAI L      + 
Sbjct: 211 GSPLAHLADCVLNVFSHEDSGQY--TPMVSRLLQLAVIDILAIGLALRLGETA 261


>gi|255505129|ref|ZP_05344628.3| inosine-5'-monophosphate dehydrogenase [Bryantella formatexigens
           DSM 14469]
 gi|255269164|gb|EET62369.1| inosine-5'-monophosphate dehydrogenase [Bryantella formatexigens
           DSM 14469]
          Length = 498

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 55  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIS 109

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  E  KL GIIT  D+   F +D  T  ++D 
Sbjct: 110 DPFYLSPENTLADANELMAKFRISGVPIT-ENGKLVGIITNRDLK--FEED-YTKKIKDS 165

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +          L  A ++L +     L +VDD     G++   D+
Sbjct: 166 MTSEGLVTAKVGITLEEAKKILGKARKEKLPIVDDDYNLKGLITIKDI 213


>gi|217976546|ref|YP_002360693.1| putative signal transduction protein with CBS domains [Methylocella
           silvestris BL2]
 gi|217501922|gb|ACK49331.1| putative signal transduction protein with CBS domains [Methylocella
           silvestris BL2]
          Length = 143

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   G ++  ++    + + + IL+ +  G V V D    + GI++E DI R   +D  +
Sbjct: 7   LAEKGRNVSTIQPHRTIAEVLQILAVQNIGAVVVTDSEGGVLGILSERDIVRALGRDGAS 66

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
               +    M       LE   +++AM+ +       L VV    K  G+V   DL++F 
Sbjct: 67  ALDDAASKYMTAKVITTLESECVSIAMEKMTTRRFRHLPVV-KDGKLAGLVSIGDLVKFR 125

Query: 340 I 340
           +
Sbjct: 126 L 126


>gi|20088906|ref|NP_614981.1| hypothetical protein MA0007 [Methanosarcina acetivorans C2A]
 gi|19913749|gb|AAM03461.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 364

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V     + + +  + EK+     VVD G  LKGI+T  DI R    D     V
Sbjct: 248 MTKNVVTVPSSMNIDELVQFMFEKKHMGYPVVD-GGSLKGIVTFTDIQRVSTLDRPVTRV 306

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D+M ++   +      + A++L+   NI  ++V+D+  + +G++   DL+R
Sbjct: 307 SDIMTRDIISVTSGAQASDALKLVTARNIGRVLVIDN-GELVGVLSRTDLVR 357



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + V+D+M KN   +     +   +Q + +       VVD      GIV F D+ R
Sbjct: 239 LENVLVKDIMTKNVVTVPSSMNIDELVQFMFEKKHMGYPVVD-GGSLKGIVTFTDIQR 295



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V  G    DA+ +++ +  G V V+D   +L G+++  D+ R  
Sbjct: 317 VTSGAQASDALKLVTARNIGRVLVID-NGELVGVLSRTDLVRTL 359


>gi|15679286|ref|NP_276403.1| inosine-5'-monophosphate dehydrogenase related protein VI
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622389|gb|AAB85764.1| inosine-5'-monophosphate dehydrogenase related protein VI
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 269

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V       + I ++ E       V D    + G++T  D+           +
Sbjct: 10  YMTRDVITVSSDTSTAEIIKLMKETGHDGFPVKD-NGSVIGMVTAFDLL----IKPWVKT 64

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V ++M ++  V  +D  L  A +++ +  IS L V++   K +GI+   D++R
Sbjct: 65  VSEIMSRDVVVADQDMSLNDAARVMFRMGISRLPVINKEGKLVGIITNTDIVR 117



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N   V D M ++   +  DT     ++L+++       V  D    IG+V   DLL
Sbjct: 3   NKALVRDYMTRDVITVSSDTSTAEIIKLMKETGHDGFPV-KDNGSVIGMVTAFDLL 57



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 217 FVCASDVMHSGDSIPLVK-IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 V        +V      L DA  ++       + V+++  KL GIIT  DI R
Sbjct: 59  KPWVKTVSEIMSRDVVVADQDMSLNDAARVMFRMGISRLPVINKEGKLVGIITNTDIVR 117


>gi|49482800|ref|YP_040024.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257424688|ref|ZP_05601115.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257429991|ref|ZP_05606375.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432693|ref|ZP_05609053.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435595|ref|ZP_05611643.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282903161|ref|ZP_06311052.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C160]
 gi|282904950|ref|ZP_06312808.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907904|ref|ZP_06315738.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282910214|ref|ZP_06318018.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282913406|ref|ZP_06321195.1| SIS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282918359|ref|ZP_06326096.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282923324|ref|ZP_06331004.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C101]
 gi|283957372|ref|ZP_06374825.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500454|ref|ZP_06666305.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|293509397|ref|ZP_06668108.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M809]
 gi|293523985|ref|ZP_06670672.1| SIS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|295427112|ref|ZP_06819748.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297590537|ref|ZP_06949176.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|49240929|emb|CAG39596.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257272258|gb|EEV04381.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257279188|gb|EEV09789.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257282108|gb|EEV12243.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257284786|gb|EEV14905.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M876]
 gi|282314192|gb|EFB44582.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C101]
 gi|282317493|gb|EFB47865.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C427]
 gi|282322438|gb|EFB52760.1| SIS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282325606|gb|EFB55914.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282328149|gb|EFB58428.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282331775|gb|EFB61286.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282596116|gb|EFC01077.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           C160]
 gi|283790823|gb|EFC29638.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920948|gb|EFD98009.1| SIS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|291095459|gb|EFE25720.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           58-424]
 gi|291467494|gb|EFF10009.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           M809]
 gi|295128900|gb|EFG58530.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           EMRSA16]
 gi|297576836|gb|EFH95551.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MN8]
 gi|312439008|gb|ADQ78079.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           TCH60]
 gi|315193939|gb|EFU24333.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 182

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +   HG A P  S   Q +    D++ + L+   N SE      H
Sbjct: 125 TNIVLPAGTKYDEHGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|99080949|ref|YP_613103.1| signal-transduction protein [Ruegeria sp. TM1040]
 gi|99037229|gb|ABF63841.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
           TM1040]
          Length = 144

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 54/126 (42%), Gaps = 6/126 (4%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    ++ S D   +V       +  A  +LSE   G V V  +  K  GI++E DI R 
Sbjct: 1   MLVKSILKSKDIAEVVTITPEATIEAAAQLLSEHGIGTVVVSPDKSKPVGILSERDIVRQ 60

Query: 276 FHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             K  +      VED M ++     +D++   A+  + +     + VV +    +GI+  
Sbjct: 61  LAKVGSVCLNHKVEDYMTRDVVTCTQDSVAEQALSTMTEGRFRHMPVV-EDGALVGIISL 119

Query: 333 LDLLRF 338
            D+++ 
Sbjct: 120 GDVVKA 125



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/86 (19%), Positives = 37/86 (43%), Gaps = 2/86 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           ++    K+G++ +      +    +           A++ ++E RF  + VV E   L G
Sbjct: 57  IVRQLAKVGSVCLNHKVEDYMTRDVVTCTQDSVAEQALSTMTEGRFRHMPVV-EDGALVG 115

Query: 266 IITEGDIFRN-FHKDLNTLSVEDVMI 290
           II+ GD+ +   ++     +  + MI
Sbjct: 116 IISLGDVVKAQLNEVAMEKTALEGMI 141


>gi|160935704|ref|ZP_02083079.1| hypothetical protein CLOBOL_00594 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441448|gb|EDP19158.1| hypothetical protein CLOBOL_00594 [Clostridium bolteae ATCC
           BAA-613]
          Length = 285

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 63/160 (39%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SL  +           AV  I   + R++  G+G SG +           G  +    
Sbjct: 109 IQSLRDTSDVLSRENIDEAVNLILGCR-RLLFFGVGGSGCVAMDGQHKFLKIGYMAMAFT 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        ++T  D+++ +S SG+S ++   +  A++     IAIT+  KS +   AD
Sbjct: 168 DSNLQAMAASVLTSRDVLVAVSHSGASKDILMAMDIAKQSGAKTIAITNYGKSPIVEKAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +VL                +S I +L I D L I +   R
Sbjct: 228 VVLYTS--SNETAFNSDALSSRIAELTIIDMLYIGVSYKR 265


>gi|147678461|ref|YP_001212676.1| CBS domain-containing protein [Pelotomaculum thermopropionicum SI]
 gi|146274558|dbj|BAF60307.1| FOG: CBS domain [Pelotomaculum thermopropionicum SI]
          Length = 211

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 56/126 (44%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------- 273
           +   ++  V     + +A+ I+ + +   + VV     L+G++TE ++            
Sbjct: 6   YMTRNLITVDKKTGIFEALEIMKKHKIRQLPVVSAEGHLEGLVTEKELLTVSPSPATSLS 65

Query: 274 -RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L  ++V + M+KNP  +  DT L  A  L+R+H I  + V+ +  +  GI+  
Sbjct: 66  IYELNYLLAKMTVAEAMVKNPLTVTTDTTLEEAALLMREHKIGSVPVM-EGGRIAGIITV 124

Query: 333 LDLLRF 338
            D+   
Sbjct: 125 TDIFDA 130



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M +N   + + T +  A++++++H I  L VV       G+V   +LL
Sbjct: 3   VRDYMTRNLITVDKKTGIFEALEIMKKHKIRQLPVVSAEGHLEGLVTEKELL 54



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V     L +A  ++ E + G V V+ EG ++ GIIT  DIF    K
Sbjct: 89  VTTDTTLEEAALLMREHKIGSVPVM-EGGRIAGIITVTDIFDALVK 133


>gi|90962912|ref|YP_536827.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           UCC118]
 gi|301300524|ref|ZP_07206721.1| SIS domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
 gi|90822106|gb|ABE00744.1| Transcriptional regulator, RpiR family [Lactobacillus salivarius
           UCC118]
 gi|300851854|gb|EFK79541.1| SIS domain protein [Lactobacillus salivarius ACS-116-V-Col5a]
          Length = 274

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           +   H  V  I   + RV + G+G SG+   +    L   G  +F    +     D  ++
Sbjct: 110 TDTIHNIVHAITKAR-RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 168

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             DD+II +S SG++D++      A++    +I+IT   +S +   +    +   +  + 
Sbjct: 169 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTW--SAVVKNSNF 226

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                   S +  + + D + + L+E   +S 
Sbjct: 227 VDNTRFINSQLAIVYVIDIITMELMEKSEYSS 258


>gi|300790615|ref|YP_003770906.1| RpiR family transcriptional regulator [Amycolatopsis mediterranei
           U32]
 gi|299800129|gb|ADJ50504.1| RpiR family transcriptional regulator [Amycolatopsis mediterranei
           U32]
          Length = 294

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 6/178 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++       +   A+ R +      L      +   AV    A  GRV + G+G S  + 
Sbjct: 88  EDDLAAVIGKVSFADARAVEETADQLDIATLERVIAAV----AGAGRVDVYGVGASAFVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           + L   L   G   F             +++  D+ I +S +G++ +    L  AR    
Sbjct: 144 ADLQQKLHRIGRVCFAWSDTHIMLTSAAVLSPGDVAIGVSHTGATTDTVEALRVAREHGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             IA+T+  +S +   AD VLT      +   G   T S I QL + D L I + +  
Sbjct: 204 ITIAVTNFPRSPITEVADHVLTTAARETTFRSGA--TASRIAQLTVIDCLFIGVAQRH 259


>gi|284165432|ref|YP_003403711.1| hypothetical protein Htur_2156 [Haloterrigena turkmenica DSM 5511]
 gi|284015087|gb|ADB61038.1| CBS domain containing membrane protein [Haloterrigena turkmenica
           DSM 5511]
          Length = 385

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 50/109 (45%), Gaps = 1/109 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P V     + +   +L E       V  E   L G+IT+  I     ++L+TL+VE
Sbjct: 72  NAPAPQVDRNEDVRETARVLVESNAKVAPVF-ENGDLWGVITDDAILEAVLENLDTLTVE 130

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D+    P  + ED  +  A+  LR+H IS L V+++     G+V   D+
Sbjct: 131 DIYTAEPVTLKEDDGIGRAINQLREHGISRLPVLNENGYLSGVVTTHDI 179



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 17/122 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------- 279
           K    +  AI  L E     + V++E   L G++T  DI     ++              
Sbjct: 141 KEDDGIGRAINQLREHGISRLPVLNENGYLSGVVTTHDIADFVIRENHTTTTGDRVGDTQ 200

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
            L  + V D+M    +    DT    A++ + + + + L+V   DD +  IG++   D+L
Sbjct: 201 RLLDVPVYDIMASPVETTTLDTTAQEAVETMLEKDYAGLIVTPEDDDRMVIGVITKTDVL 260

Query: 337 RF 338
           R 
Sbjct: 261 RA 262


>gi|217077799|ref|YP_002335517.1| polyA polymerase family protein [Thermosipho africanus TCF52B]
 gi|217037654|gb|ACJ76176.1| polyA polymerase family protein [Thermosipho africanus TCF52B]
          Length = 859

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     +     +++    G   ++ EG KL GI+T   + +      +   V
Sbjct: 311 MTSPVRTVFTHESIGKVYEMMNLTGHGGFPII-EGNKLVGIVTRKAVDKAMRHGFSDRPV 369

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +M  +   + ED  +    +L+ ++++  + V++     +GI+   DLL
Sbjct: 370 KSIMTTSLVTVYEDDPVFKVKKLMLENDVGRIPVLNKNNILVGIITRSDLL 420



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 26/72 (36%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +   F           S+  V    P+     ++ E   G + V+++   L GIIT  
Sbjct: 358 KAMRHGFSDRPVKSIMTTSLVTVYEDDPVFKVKKLMLENDVGRIPVLNKNNILVGIITRS 417

Query: 271 DIFRNFHKDLNT 282
           D+     K+L  
Sbjct: 418 DLLNLDEKELKK 429


>gi|220929202|ref|YP_002506111.1| signal transduction protein with CBS domains [Clostridium
           cellulolyticum H10]
 gi|219999530|gb|ACL76131.1| putative signal transduction protein with CBS domains [Clostridium
           cellulolyticum H10]
          Length = 141

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
              ++  V+    ++D   ++ +   G + V D+   + G++T+ DI        K+   
Sbjct: 7   MTTNVTYVEPNASILDTAKLMQQHNVGSIPVCDK-GSVVGMVTDRDIVVRNIAIGKNPQQ 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             V D+M      +  D  ++   +++    I  + VVD     +GIV   D
Sbjct: 66  TPVSDIMTTGVTSVSPDMEMSQVTKMMADSQIRRVPVVDQNN-LVGIVALGD 116



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M  N   +  +  +    +L++QHN+  + V D     +G+V   D++
Sbjct: 1   MKVKDIMTTNVTYVEPNASILDTAKLMQQHNVGSIPVCDK-GSVVGMVTDRDIV 53


>gi|115372226|ref|ZP_01459536.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
 gi|310817291|ref|YP_003949649.1| CBS domain-containing protein [Stigmatella aurantiaca DW4/3-1]
 gi|115370691|gb|EAU69616.1| CBS domain pair protein [Stigmatella aurantiaca DW4/3-1]
 gi|309390363|gb|ADO67822.1| CBS domain protein [Stigmatella aurantiaca DW4/3-1]
          Length = 311

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 47/135 (34%), Gaps = 9/135 (6%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             PG  +                +  V     L      +     G + V  EG ++ GI
Sbjct: 162 FQPGTSMRQRISDV-----MKKGLECVGPHETLKAVAEKMRACNIGPLPVC-EGDQVLGI 215

Query: 267 ITEGDIF-RNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           IT+ DI  R   +  D NT  V   M    + +  D  L  A + +    I  ++V+D  
Sbjct: 216 ITDRDIVIRAVSQGWDPNTTPVSAAMTHQVESVFVDESLGEAARRMNAKQIRRILVMDRQ 275

Query: 324 QKAIGIVHFLDLLRF 338
            K  GI+   D+   
Sbjct: 276 GKLAGILSTKDIAEA 290



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           V +   L +A   ++ K+   + V+D   KL GI++  DI     + +    +  + 
Sbjct: 248 VFVDESLGEAARRMNAKQIRRILVMDRQGKLAGILSTKDIAEALGEHIAGRPLGVIA 304


>gi|91784095|ref|YP_559301.1| inositol-5-monophosphate dehydrogenase [Burkholderia xenovorans
           LB400]
 gi|91688049|gb|ABE31249.1| inosine-5'-monophosphate dehydrogenase [Burkholderia xenovorans
           LB400]
          Length = 486

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F + L+   V ++M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FEERLDE-PVRNIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|73668503|ref|YP_304518.1| hypothetical protein Mbar_A0966 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395665|gb|AAZ69938.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 331

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/202 (17%), Positives = 77/202 (38%), Gaps = 10/202 (4%)

Query: 144 ITSENKSVVACHADIVLTLP---------KEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           I+     ++A     V+TLP         K          P T+A  +   G   ++ ++
Sbjct: 52  ISEHEGKILALATRNVVTLPPTATIMDAIKIMTEKRFRRIPITNAGTRRLEGVVTSVDII 111

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +       +  V +         +           IP +       DA++ + E+R G +
Sbjct: 112 DFLGGGRKNLLVENRFKGNLLAAINEEVRQIMETDIPYLYDQADFKDAVSTMIERRTGGL 171

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +V+   ++  I TE +        +   +V++ M +N K++  DT +  A +++  + +
Sbjct: 172 PIVNSDMQVVAIFTERNALELMGGLVTNRTVDEYMTENVKMVSTDTPIGQAAKVMVDNRL 231

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
             L VV       GI+   D++
Sbjct: 232 RRLPVV-KDGIFAGIITSSDII 252



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 55/147 (37%), Gaps = 15/147 (10%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   +    +G L    +   +  +++ +V    P+  A  ++ + R   + VV +    
Sbjct: 184 FTERNALELMGGLVTNRTVDEYMTENVKMVSTDTPIGQAAKVMVDNRLRRLPVV-KDGIF 242

Query: 264 KGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            GIIT  DI                         V  ++ ++       T L  AM+++ 
Sbjct: 243 AGIITSSDIIHFLGNGEAFSKLTTGNIHEALDQPVGSIVSRDLIWTGPGTDLGKAMEIML 302

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  I  L V+D+     GI+   DLLR
Sbjct: 303 EKKIGSLPVLDN-GLLRGIITERDLLR 328



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            G  L  A+ I+ EK+ G + V+D    L+GIITE D+ R+ 
Sbjct: 290 PGTDLGKAMEIMLEKKIGSLPVLD-NGLLRGIITERDLLRSL 330


>gi|21282255|ref|NP_645343.1| hypothetical protein MW0526 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485436|ref|YP_042657.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253731182|ref|ZP_04865347.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|297208714|ref|ZP_06925142.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300912804|ref|ZP_07130246.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           TCH70]
 gi|21203691|dbj|BAB94391.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243879|emb|CAG42304.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|253724923|gb|EES93652.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           USA300_TCH959]
 gi|296886659|gb|EFH25564.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ATCC 51811]
 gi|300885908|gb|EFK81111.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           TCH70]
          Length = 182

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +    G A P  S   Q +    D++ + L+   N +E      H
Sbjct: 125 TNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNH 178


>gi|223042909|ref|ZP_03612957.1| 6-phospho 3-hexuloisomerase [Staphylococcus capitis SK14]
 gi|222443763|gb|EEE49860.1| 6-phospho 3-hexuloisomerase [Staphylococcus capitis SK14]
          Length = 182

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L       +      +     R+ + G G+SG + +  A  L   G  ++ V 
Sbjct: 11  LDELDHTLSHVDDTSYERFANDVVGAD-RIFVAGKGRSGFVANSFAMRLNQLGEHAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A++    ++ IT++  S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQKIGAKVVLITTQTDSPIGELAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            ++ LP   +    G   P  S   Q  L   D++ + L+E+ + +E      H
Sbjct: 125 TIIELPAGTKHDIEGSKQPLGSLFEQASLVFLDSVVLPLMEAFHINEETMQQNH 178


>gi|221213657|ref|ZP_03586631.1| glucokinase [Burkholderia multivorans CGD1]
 gi|221166446|gb|EED98918.1| glucokinase [Burkholderia multivorans CGD1]
          Length = 642

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 8/193 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESRNFSEND 203
           + +   R  S ND
Sbjct: 592 VGVAIRRA-SPND 603


>gi|218901915|ref|YP_002449749.1| CBS domain protein [Bacillus cereus AH820]
 gi|229120369|ref|ZP_04249616.1| CBS domain protein [Bacillus cereus 95/8201]
 gi|218538112|gb|ACK90510.1| CBS domain protein [Bacillus cereus AH820]
 gi|228662954|gb|EEL18547.1| CBS domain protein [Bacillus cereus 95/8201]
          Length = 139

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 6/115 (5%)

Query: 225 HSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDL 280
               S  +V+      + +A   + E+  G + VV E +++ G++T+ D+       K  
Sbjct: 5   RDVMSTHIVQCTTLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHP 63

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  + +VM  N   +  D  +  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 64  GSNKITNVMTTNIISVSPDDSIEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTTLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|161525603|ref|YP_001580615.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia multivorans ATCC 17616]
 gi|189349668|ref|YP_001945296.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia multivorans ATCC 17616]
 gi|160343032|gb|ABX16118.1| glucokinase [Burkholderia multivorans ATCC 17616]
 gi|189333690|dbj|BAG42760.1| glucokinase [Burkholderia multivorans ATCC 17616]
          Length = 642

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/193 (19%), Positives = 69/193 (35%), Gaps = 8/193 (4%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESRNFSEND 203
           + +   R  S ND
Sbjct: 592 VGVAIRRA-SPND 603


>gi|83309972|ref|YP_420236.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82944813|dbj|BAE49677.1| CBS domain [Magnetospirillum magneticum AMB-1]
          Length = 146

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVM 289
           V     + DA  +L++ + G V V++ G ++ GI++E DI R     ++   T  V D+M
Sbjct: 19  VTPEASIGDAARLLAQHKIGAVLVMN-GDRVAGILSERDIVRGLADAVDVCITAKVRDLM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                V  ED  +   M+++    I  L V+D+     GIV   D+++
Sbjct: 78  TAEVFVCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVK 125



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  +  +  A +LL QH I  ++V+ +  +  GI+   D++R
Sbjct: 17  ISVTPEASIGDAARLLAQHKIGAVLVM-NGDRVAGILSERDIVR 59



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 21/43 (48%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +      +   + I++ KR   + V+D    + GI+T GD+ +
Sbjct: 83  VCHEDDTVERLMEIMTAKRIRHLPVMDNNGDVAGIVTIGDVVK 125


>gi|229544986|ref|ZP_04433711.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
 gi|229309878|gb|EEN75865.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
          Length = 197

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 73/178 (41%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + Q   + +    VE+IK     + + G G+SG      A+ L   G     V 
Sbjct: 22  LAELTQNGQRIDTNEIAHFVEQIKQA-NHIFLNGAGRSGIAIRAFANRLMHIGFSVSIVG 80

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A++  I L  +T + +S +   AD
Sbjct: 81  EISSPHS-----KPGDLLIICSGSGETGSLKSLAEKAKQSGIDLALVTMKKESTIGQLAD 135

Query: 158 IVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
           +VL LP   +            P  SA  QLA    D + + L++    +    +  H
Sbjct: 136 VVLVLPGTTKEENDRETASFAQPMGSAFEQLAFLTFDGMVLNLMDELGETSETMFKRH 193


>gi|126458985|ref|YP_001055263.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248706|gb|ABO07797.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 139

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-KDLNT 282
           +      +     L +A   +++ + G + VVD+    K  G+++E D+ R    K    
Sbjct: 7   ASRPPVTITSDATLYEAAEKMAQHKVGLLVVVDKANPKKPIGVVSERDVIRAIAAKMPLD 66

Query: 283 LSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V+ V    N   +  D  +T A + +++ N+  ++V+D   +  G++   DL++ 
Sbjct: 67  TTVDKVGTMHNFVFVYADDPITTAARKMKERNVRHVVVLDKNGELYGVISIRDLIKE 123



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
            D+  + P  I  D  L  A + + QH + +L+VVD     K IG+V   D++R 
Sbjct: 4   GDLASRPPVTITSDATLYEAAEKMAQHKVGLLVVVDKANPKKPIGVVSERDVIRA 58


>gi|307942056|ref|ZP_07657407.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
 gi|307774342|gb|EFO33552.1| CBS domain-containing protein [Roseibium sp. TrichSKD4]
          Length = 173

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           +     L +A+ +L EK  G + V  +  KL GI++E DI R             VED+M
Sbjct: 48  ISPSNSLHEAVVMLREKGIGALIVKGDDGKLAGILSERDIVRRLADTPGQTLGQKVEDIM 107

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K+ +    D  L   +Q +       + VV + +  +G+V   D++
Sbjct: 108 TKSVQTCEPDDALISVLQRMTNGRFRHMPVV-EGEAVVGMVTIGDVV 153



 Score = 43.0 bits (100), Expect = 0.074,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 21/43 (48%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I     L  A+ +LR+  I  L+V  D  K  GI+   D++R
Sbjct: 47  SISPSNSLHEAVVMLREKGIGALIVKGDDGKLAGILSERDIVR 89


>gi|292491946|ref|YP_003527385.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
 gi|291580541|gb|ADE14998.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
          Length = 152

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 8/117 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++        L     ++ +K  G + +VD    L G+IT+ DI       LN  + 
Sbjct: 7   MIKNVATCGPETTLDTVALLMWDKDCGSIPIVDGEGALIGVITDRDI--AMGCGLNHKAP 64

Query: 286 EDVM------IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++        +       D  +  A+Q + +H I  L+V D      GI+   D++
Sbjct: 65  WEITAREVWNNRQVFTSHPDDDIHTALQAMSEHRIRRLLVTDGNGHLEGILSADDIV 121



 Score = 43.0 bits (100), Expect = 0.064,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+D+MIKN      +T L     L+   +   + +VD     IG++   D+
Sbjct: 3   VKDLMIKNVATCGPETTLDTVALLMWDKDCGSIPIVDGEGALIGVITDRDI 53



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                +  A+  +SE R   + V D    L+GI++  DI     K ++     ++
Sbjct: 82  HPDDDIHTALQAMSEHRIRRLLVTDGNGHLEGILSADDIVACSEKGMSGRRAPEL 136


>gi|229177250|ref|ZP_04304634.1| CBS domain protein [Bacillus cereus 172560W]
 gi|229188928|ref|ZP_04315958.1| CBS domain protein [Bacillus cereus ATCC 10876]
 gi|228594531|gb|EEK52320.1| CBS domain protein [Bacillus cereus ATCC 10876]
 gi|228606129|gb|EEK63566.1| CBS domain protein [Bacillus cereus 172560W]
          Length = 132

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 1   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 60  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 110


>gi|52424253|ref|YP_087390.1| DNA-binding transcriptional repressor RpiR [Mannheimia
           succiniciproducens MBEL55E]
 gi|52306305|gb|AAU36805.1| RpiR protein [Mannheimia succiniciproducens MBEL55E]
          Length = 286

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 75/195 (38%), Gaps = 12/195 (6%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++  Q   +      + L    S L      +F   V KI      + + GIG S  I  
Sbjct: 95  DTATQVIKKVFETSIQALQETMSILD---ISEFERCV-KILVEADHIDLFGIGGSAQIAK 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +A      G  +     +        +    ++++ +S SG++ ++   L  AR+    
Sbjct: 151 DMAHKFLRIGIKASVYDDSHMMLMAGAVSHPGNVVLAISHSGTTIDVIEPLQLARQNGAK 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR--- 197
            IAIT+   S +A  AD+VLT   +        A   + I QL I DAL +A+ +     
Sbjct: 211 TIAITNYAISPIAECADVVLTSTSQGSLLLGENA--AARIAQLNILDALYVAVAKQNLDI 268

Query: 198 ---NFSENDFYVLHP 209
              N  +  + V H 
Sbjct: 269 SEDNLRKTRYAVKHK 283


>gi|15923561|ref|NP_371095.1| hypothetical protein SAV0571 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926249|ref|NP_373782.1| hypothetical protein SA0529 [Staphylococcus aureus subsp. aureus
           N315]
 gi|57651447|ref|YP_185503.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|148267031|ref|YP_001245974.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH9]
 gi|150393078|ref|YP_001315753.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|151220746|ref|YP_001331568.1| hypothetical protein NWMN_0534 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156978900|ref|YP_001441159.1| hypothetical protein SAHV_0569 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161353531|ref|YP_499126.2| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|161508811|ref|YP_001574470.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|162138560|ref|YP_493259.2| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|221141862|ref|ZP_03566355.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           str. JKD6009]
 gi|253316797|ref|ZP_04840010.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|255005365|ref|ZP_05143966.2| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257793153|ref|ZP_05642132.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9781]
 gi|258407637|ref|ZP_05680772.1| sugar isomerase [Staphylococcus aureus A9763]
 gi|258420325|ref|ZP_05683270.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9719]
 gi|258437727|ref|ZP_05689432.1| sugar isomerase [Staphylococcus aureus A9299]
 gi|258442322|ref|ZP_05691085.1| sugar isomerase [Staphylococcus aureus A8115]
 gi|258446308|ref|ZP_05694466.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|258450033|ref|ZP_05698130.1| SIS domain-containing protein [Staphylococcus aureus A6224]
 gi|258450976|ref|ZP_05699028.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A5948]
 gi|258455072|ref|ZP_05703034.1| SIS domain-containing protein [Staphylococcus aureus A5937]
 gi|262049666|ref|ZP_06022533.1| hypothetical protein SAD30_1127 [Staphylococcus aureus D30]
 gi|262051908|ref|ZP_06024122.1| hypothetical protein SA930_1247 [Staphylococcus aureus 930918-3]
 gi|269202194|ref|YP_003281463.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282895009|ref|ZP_06303231.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8117]
 gi|282915895|ref|ZP_06323660.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282925413|ref|ZP_06333068.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9765]
 gi|282928706|ref|ZP_06336301.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A10102]
 gi|283769726|ref|ZP_06342618.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           H19]
 gi|284023585|ref|ZP_06377983.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           132]
 gi|294849215|ref|ZP_06789958.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9754]
 gi|295406948|ref|ZP_06816751.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8819]
 gi|296275487|ref|ZP_06857994.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297246109|ref|ZP_06929964.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8796]
 gi|304381829|ref|ZP_07364476.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|13700463|dbj|BAB41760.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246339|dbj|BAB56733.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|57285633|gb|AAW37727.1| SIS domain protein [Staphylococcus aureus subsp. aureus COL]
 gi|147740100|gb|ABQ48398.1| hexulose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149945530|gb|ABR51466.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|150373546|dbj|BAF66806.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156721035|dbj|BAF77452.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367620|gb|ABX28591.1| glucose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|257787125|gb|EEV25465.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9781]
 gi|257840717|gb|EEV65175.1| sugar isomerase [Staphylococcus aureus A9763]
 gi|257843639|gb|EEV68043.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9719]
 gi|257848515|gb|EEV72504.1| sugar isomerase [Staphylococcus aureus A9299]
 gi|257852051|gb|EEV75983.1| sugar isomerase [Staphylococcus aureus A8115]
 gi|257854902|gb|EEV77847.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|257856652|gb|EEV79556.1| SIS domain-containing protein [Staphylococcus aureus A6224]
 gi|257861396|gb|EEV84205.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A5948]
 gi|257862712|gb|EEV85478.1| SIS domain-containing protein [Staphylococcus aureus A5937]
 gi|259160165|gb|EEW45195.1| hypothetical protein SA930_1247 [Staphylococcus aureus 930918-3]
 gi|259162209|gb|EEW46784.1| hypothetical protein SAD30_1127 [Staphylococcus aureus D30]
 gi|262074484|gb|ACY10457.1| SIS domain-containing protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269940144|emb|CBI48520.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282320191|gb|EFB50536.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           D139]
 gi|282589589|gb|EFB94676.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A10102]
 gi|282592507|gb|EFB97518.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9765]
 gi|282762592|gb|EFC02730.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8117]
 gi|283459873|gb|EFC06963.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           H19]
 gi|283469863|emb|CAQ49074.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ST398]
 gi|285816272|gb|ADC36759.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus 04-02981]
 gi|294823747|gb|EFG40173.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9754]
 gi|294968179|gb|EFG44205.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8819]
 gi|297176955|gb|EFH36211.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A8796]
 gi|298693902|gb|ADI97124.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302750462|gb|ADL64639.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304339615|gb|EFM05562.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ATCC BAA-39]
 gi|312829067|emb|CBX33909.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315128922|gb|EFT84920.1| SIS domain protein [Staphylococcus aureus subsp. aureus CGS03]
 gi|315196497|gb|EFU26846.1| SIS domain protein [Staphylococcus aureus subsp. aureus CGS01]
 gi|320139863|gb|EFW31725.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MRSA131]
 gi|320141806|gb|EFW33634.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           MRSA177]
 gi|323439477|gb|EGA97199.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus O11]
 gi|323441324|gb|EGA98988.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus O46]
 gi|329313292|gb|AEB87705.1| Hexulose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           T0131]
 gi|329724367|gb|EGG60878.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           21172]
 gi|329729533|gb|EGG65934.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           21193]
 gi|329729938|gb|EGG66330.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           21189]
          Length = 182

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +    G A P  S   Q +    D++ + L+   N +E      H
Sbjct: 125 TNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNH 178


>gi|296158880|ref|ZP_06841708.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. Ch1-1]
 gi|295890755|gb|EFG70545.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. Ch1-1]
          Length = 486

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F + L+   V ++M   
Sbjct: 99  VPPQMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FEERLDE-PVRNIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTSLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|262402357|ref|ZP_06078918.1| Signal transduction protein [Vibrio sp. RC586]
 gi|262351139|gb|EEZ00272.1| Signal transduction protein [Vibrio sp. RC586]
          Length = 629

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/186 (17%), Positives = 65/186 (34%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L      AL    +   + F       +   L                  
Sbjct: 93  SFAVTAIEDTLLYCIPEALFHRLHQEFDSFADFVEVEQSARLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---------GQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D+            + GIITE D+ 
Sbjct: 153 KQLLTRPAPTIDKQATIQQAALRMADENLSALLILDDYILHDAEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R     ++T   V  VM      +  +  +  AM ++ ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAHGIDTQQAVSQVMTHEVISLDHNAYVYEAMLVMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|254291611|ref|ZP_04962400.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|150422468|gb|EDN14426.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 282

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALNT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|119383344|ref|YP_914400.1| inosine-5'-monophosphate dehydrogenase [Paracoccus denitrificans
           PD1222]
 gi|119373111|gb|ABL68704.1| inosine-5'-monophosphate dehydrogenase [Paracoccus denitrificans
           PD1222]
          Length = 482

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/165 (17%), Positives = 61/165 (36%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +        ++  +    S +++   ++
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGGIGVVHRNLTAEQQADEVRRVKRFESGIVYDPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   + DA  +          VVD   ++ GIIT  D+      + + + V  VM 
Sbjct: 99  T---PEQTIADAKALQERYNVTGFPVVDAAGRVVGIITNRDMRFA---NSDDMPVRAVMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E      A+ L++   I  L++ +   K  G++   D
Sbjct: 153 SGNLAILREPADRAEAIDLMKARRIEKLLITNAEGKLTGLLTLKD 197



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +P  +  +  +  A  L  ++N++   VVD   + +GI+   D+
Sbjct: 94  DPITLTPEQTIADAKALQERYNVTGFPVVDAAGRVVGIITNRDM 137


>gi|328949245|ref|YP_004366582.1| hypothetical protein Tresu_2423 [Treponema succinifaciens DSM 2489]
 gi|328449569|gb|AEB15285.1| CBS domain containing membrane protein [Treponema succinifaciens
           DSM 2489]
          Length = 214

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 13/122 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
             ++   +     +++A  I+S  +   + VVD    L GIIT  D+ +           
Sbjct: 7   MTENPITIGPEASVLEAKEIMSRNKIKKLPVVDRSGALVGIITNTDLAKASPSAATSLDM 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ LSVE  M+K+ K    +  +  A +L+  + IS L VV      +G V   
Sbjct: 67  FELGYLLSKLSVEKTMVKSVKTTTANQTVEEAARLMNDYGISCLPVV-KENLLVGFVTES 125

Query: 334 DL 335
           DL
Sbjct: 126 DL 127



 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM +NP  I  +  +  A +++ ++ I  L VVD     +GI+   DL + 
Sbjct: 3   VKDVMTENPITIGPEASVLEAKEIMSRNKIKKLPVVDRSGALVGIITNTDLAKA 56



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/87 (24%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMIKN 292
               + +A  ++++    C+ VV +   L G +TE D+F  F    NT +  V  V + N
Sbjct: 91  ANQTVEEAARLMNDYGISCLPVV-KENLLVGFVTESDLFATFIDMFNTRTPGVRAVAVVN 149

Query: 293 PKVILEDTLLTVAMQLLRQH-NISVLM 318
                   L  +A+ +  ++ NI  L+
Sbjct: 150 EI---PGELAKLAVAIAEKNGNIVSLV 173


>gi|209884748|ref|YP_002288605.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
 gi|209872944|gb|ACI92740.1| protein with 2 CBS domains [Oligotropha carboxidovorans OM5]
          Length = 142

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 50/111 (45%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           +     L +AI +LS +  G V V+ +   ++GI++E D+ R   K   +     V DVM
Sbjct: 17  IHSDATLSEAIALLSSRHIGAVLVM-KDHHIEGILSERDVVRVLAKRGAEALQEPVGDVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +              M+ +       L VV++  + +G++   D++++ +
Sbjct: 76  TRKVVTCRRADTAASIMEKMTNGKFRHLPVVEND-RVVGLISIGDIVKWRV 125


>gi|20093427|ref|NP_619502.1| hypothetical protein MA4648 [Methanosarcina acetivorans C2A]
 gi|19918801|gb|AAM07982.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 264

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFH-KDLNTLS 284
              P V     ++ A  ++ + +   V VV       + G++++ DI RN       + +
Sbjct: 70  RPSPTVTPDMDVVKAAKLMVQSKQNRVPVVKSTTDHTVVGVLSDVDILRNAELPRSASKT 129

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++ VM K  K    D  ++     + + + + + VV      IG++   D+++ GI+
Sbjct: 130 IDMVMTKKVKTCSPDERISKVWNYMTETDYTGIPVVSKKGDPIGMITRRDIIKAGIL 186



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K    +  A  ++ +  F  + VVDEG +L G++ + DI R      + ++V      +
Sbjct: 14  IKERDFVTHARQLMRDYLFRSLVVVDEGNRLVGMLNDQDIMR-VTSTRSNVTVGGYARPS 72

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLR 337
           P  +  D  +  A +L+ Q   + + VV        +G++  +D+LR
Sbjct: 73  P-TVTPDMDVVKAAKLMVQSKQNRVPVVKSTTDHTVVGVLSDVDILR 118



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 32/53 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V ++M + P  I E   +T A QL+R +    L+VVD+  + +G+++  D++R
Sbjct: 3   VSEIMSEGPVSIKERDFVTHARQLMRDYLFRSLVVVDEGNRLVGMLNDQDIMR 55



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 48/127 (37%), Gaps = 11/127 (8%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------- 275
            M     +        +      ++E  +  + VV +     G+IT  DI +        
Sbjct: 131 DMVMTKKVKTCSPDERISKVWNYMTETDYTGIPVVSKKGDPIGMITRRDIIKAGILRMSI 190

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +   +  VE +M      + E+  +  A++++ QH+I  + +V++  K  GI  
Sbjct: 191 EDERAARPNESPKVEKIMSTPAYTLSENDSVKSAIEMIIQHDIGRVTIVNEQGKISGIAD 250

Query: 332 FLDLLRF 338
             DL+  
Sbjct: 251 RQDLMNA 257


>gi|325690658|gb|EGD32659.1| CBS domain protein [Streptococcus sanguinis SK115]
 gi|325694987|gb|EGD36891.1| CBS domain protein [Streptococcus sanguinis SK150]
 gi|332367226|gb|EGJ44961.1| CBS domain protein [Streptococcus sanguinis SK1059]
          Length = 218

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPNTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  +T +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPNTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|167895465|ref|ZP_02482867.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei 7894]
          Length = 584

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|167766261|ref|ZP_02438314.1| hypothetical protein CLOSS21_00765 [Clostridium sp. SS2/1]
 gi|317496955|ref|ZP_07955285.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           5_1_63FAA]
 gi|167711980|gb|EDS22559.1| hypothetical protein CLOSS21_00765 [Clostridium sp. SS2/1]
 gi|291559105|emb|CBL37905.1| inosine-5'-monophosphate dehydrogenase [butyrate-producing
           bacterium SSC/2]
 gi|316895967|gb|EFV18119.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           5_1_63FAA]
          Length = 483

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSASMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++++ R   V +  EG KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFSLSPEHTIQDADDLMAKYRISGVPIT-EGTKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A Q+L +     L +VDD     G++   D+
Sbjct: 153 TSEGLVTAKEGITLEEAKQILGKARKEKLPIVDDDFNLKGLITIKDI 199


>gi|147920982|ref|YP_685208.1| metalloprotease [uncultured methanogenic archaeon RC-I]
 gi|110620604|emb|CAJ35882.1| predicted metalloprotease (M50 family) [uncultured methanogenic
           archaeon RC-I]
          Length = 366

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 51/119 (42%), Gaps = 2/119 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                    ++  +  G  L   +  + +K+     V+ E  +L GI+T  D+ +     
Sbjct: 240 VKVRDIMTKAVDTIDSGASLSSCLQTMFQKKHLGYPVL-ENGRLAGIVTLSDVSKVPETA 298

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++  V DVM +N   +  D     A+Q + Q  +  ++V+ +  +  GI+   D++R 
Sbjct: 299 RDSTFVRDVMTRNVITLKPDDDAADALQKISQRRVGRVVVM-EGDRLAGIISRTDIVRA 356



 Score = 39.1 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           K      DA+  +S++R G V VV EG +L GII+  DI R   
Sbjct: 316 KPDDDAADALQKISQRRVGRV-VVMEGDRLAGIISRTDIVRAIE 358



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 5/60 (8%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFLDLLR 337
           L+ + V D+M K    I     L+  +Q + Q     L   V+ +  +  GIV   D+ +
Sbjct: 237 LDGVKVRDIMTKAVDTIDSGASLSSCLQTMFQKK--HLGYPVL-ENGRLAGIVTLSDVSK 293


>gi|89073686|ref|ZP_01160200.1| transcriptional regulator, RpiR family protein [Photobacterium sp.
           SKA34]
 gi|89050461|gb|EAR55953.1| transcriptional regulator, RpiR family protein [Photobacterium sp.
           SKA34]
          Length = 283

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 72/178 (40%), Gaps = 6/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S++  A + I  +   + +  +++      +F   V+++     R+ I GIG S     
Sbjct: 95  DSSITIAQKLIQEKTHAMIATTNAIN---FSEFETIVKRLNKAH-RIQIVGIGGSALTTK 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G  +               +T++D++I +S+SG   E+      A      
Sbjct: 151 DLTFKLLKLGITALTEQDTHVQIATANTLTKNDILIAISFSGKRREILMAAQSAYDKGAT 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +IA+T+  K+ +   A   +      +      +  +S   Q  I D L +ALL+ ++
Sbjct: 211 IIALTNIKKNPLRQLAHYTIDT--IADEKQFRSSSISSRTAQNVITDLLFMALLQLKS 266


>gi|307108660|gb|EFN56900.1| hypothetical protein CHLNCDRAFT_144573 [Chlorella variabilis]
          Length = 184

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 7/137 (5%)

Query: 200 SENDFYVLHPGGKL-GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           S++ F     G +L     +          ++       PL  A     +   G + VVD
Sbjct: 32  SDDVFKFFARGAELTELTSLWKHVEDIMQANVITTTPDTPLQQARAACKQHGIGGMPVVD 91

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            G KL GII++ D  R          V D M      +     +  A  L+ Q+++  L 
Sbjct: 92  RGGKLVGIISKSDFRRGGAA------VRDAMTAAVVAVRLRDAIPAAAALMLQNDLDRLP 145

Query: 319 VVDDCQKAIGIVHFLDL 335
           VVD   + +GIV   D+
Sbjct: 146 VVDPAGRCVGIVTRTDM 162



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VED+M  N      DT L  A    +QH I  + VVD   K +GI+   D  R G
Sbjct: 55  VEDIMQANVITTTPDTPLQQARAACKQHGIGGMPVVDRGGKLVGIISKSDFRRGG 109


>gi|312113812|ref|YP_004011408.1| signal transduction protein with CBS domains [Rhodomicrobium
           vannielii ATCC 17100]
 gi|311218941|gb|ADP70309.1| putative signal transduction protein with CBS domains
           [Rhodomicrobium vannielii ATCC 17100]
          Length = 143

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           V     + + + +L   R G V VVDE   + GI++E DI R   +        +V D M
Sbjct: 17  VLPDRTVFEVVRLLHANRIGAVVVVDEQHHVLGIVSERDIVRILAERGAAALEETVADHM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +      E   +   M+ + QH    + V +   + +GIV   D+++  +
Sbjct: 77  TRPVSTCSEHHSIDWVMEEMTQHRFRHVPVTEKE-RLVGIVSIGDVVKAKL 126



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D  +   ++LL  + I  ++VVD+    +GIV   D++R 
Sbjct: 12  RKVLSVLPDRTVFEVVRLLHANRIGAVVVVDEQHHVLGIVSERDIVRI 59


>gi|157144643|ref|YP_001451962.1| hypothetical protein CKO_00363 [Citrobacter koseri ATCC BAA-895]
 gi|263504551|sp|A8ADG3|MURR_CITK8 RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|157081848|gb|ABV11526.1| hypothetical protein CKO_00363 [Citrobacter koseri ATCC BAA-895]
          Length = 287

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 73/204 (35%), Gaps = 15/204 (7%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALR--SIIAEKRGLSSLESSLQGELSFQFHCAVEKI-- 60
           F+  +    + +S+ +      AL   S I  +  L  +   L  E  F        +  
Sbjct: 63  FTELRMALIEEYSVNREKKHDTALHLHSTITSEDSLEVIARKLNREKMFALEETCSLMDF 122

Query: 61  --------KAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
                      K R++ ITG+G S  +G  L+  L   G                  +  
Sbjct: 123 DRLKQVINLISKARLIQITGVGGSALVGRDLSFKLMKIGYRVACEVDTHVQATIAQALQE 182

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ I +S+SGS  E+      AR+    +IAITS   S +   AD  L           
Sbjct: 183 GDVQIAISYSGSKKEIVLCAEAARKQGATVIAITSLTDSPLRRLADYTLDTVSGETEWR- 241

Query: 172 GLAPTTSAIMQLAIGDALAIALLE 195
             +  ++   Q ++ D L + +++
Sbjct: 242 -SSSMSTRTAQNSVTDLLFVGMVQ 264


>gi|146303620|ref|YP_001190936.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701870|gb|ABP95012.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 279

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 47/99 (47%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V      ++AITI+  + FG + VV+  ++  G++TE D    F       SV   +   
Sbjct: 87  VAEDQDALEAITIMVTRNFGSLPVVNASRRPVGMVTERDFLLMFQDLDPMFSVSGFVTPR 146

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +  DTLL  A++++ +     L V D+  K +G+V 
Sbjct: 147 VNTVFRDTLLEQAVRMMLRRGFRRLPVTDEDGKVVGMVT 185



 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 14/123 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
              + P++ +   L +A   ++++  G V V DE   +KGI++  D+             
Sbjct: 7   MNPNPPIISVSDGLKEAFKKVNDRGLGRVIVADE--VVKGILSTRDLLSILLSFCPSACT 64

Query: 277 HKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             DL           M  NP  + ED     A+ ++   N   L VV+  ++ +G+V   
Sbjct: 65  QADLYKMGVTPASGYMTVNPMTVAEDQDALEAITIMVTRNFGSLPVVNASRRPVGMVTER 124

Query: 334 DLL 336
           D L
Sbjct: 125 DFL 127



 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 44/194 (22%), Positives = 71/194 (36%), Gaps = 22/194 (11%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVC 219
           +   P S    + P T A  Q A+    AI ++ +RNF           P G +      
Sbjct: 71  MGVTPASGYMTVNPMTVAEDQDALE---AITIMVTRNFGSLPVVNASRRPVGMVTERDFL 127

Query: 220 A---------SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                     S        +  V     L  A+ ++  + F  + V DE  K+ G++T  
Sbjct: 128 LMFQDLDPMFSVSGFVTPRVNTVFRDTLLEQAVRMMLRRGFRRLPVTDEDGKVVGMVTAA 187

Query: 271 DIFRNFHKDLNTL--------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           D  +   K +  L         + D+M      + ED  +  A  L+    I  L+++D 
Sbjct: 188 DAVKAAAKAVEKLEPELFFGRRIRDIMKTPVVTVEEDRSVNEAAALMITKGIGALVLLDK 247

Query: 323 CQKAIGIVHFLDLL 336
             +A GIV   DLL
Sbjct: 248 EGRAKGIVTERDLL 261



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 29/61 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    + +A  ++  K  G + ++D+  + KGI+TE D+    H  L+   V
Sbjct: 214 MKTPVVTVEEDRSVNEAAALMITKGIGALVLLDKEGRAKGIVTERDLLIALHYQLHLPFV 273

Query: 286 E 286
           +
Sbjct: 274 K 274


>gi|329925189|ref|ZP_08280132.1| transcriptional regulator, RpiR family [Paenibacillus sp. HGF5]
 gi|328940022|gb|EGG36355.1| transcriptional regulator, RpiR family [Paenibacillus sp. HGF5]
          Length = 291

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 64/178 (35%), Gaps = 9/178 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L+S+  + Q     Q   AV+ +   K R+ + G+  S  +       L   G 
Sbjct: 104 AIESNHLTSIRDTTQLLDLGQLERAVDALCRAK-RIDLYGVATSSIVAQDFYQKLIRIGK 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                  +         +T  D+ + +S+SG + E    L  A+      I+ITS   S 
Sbjct: 163 NCTAFADSHMQITSASTLTSSDVAVAVSYSGETPETIDALACAKDAGAFTISITSYRSSA 222

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           ++  ADI L      E    G     S I QL I D L + +         DF    P
Sbjct: 223 ISALADITLYSSSLEEGMRRGD--MASRIAQLHIIDILFMGMASR------DFSTYVP 272


>gi|309790833|ref|ZP_07685377.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
 gi|308227120|gb|EFO80804.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
          Length = 152

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 227 GDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
             +  +V      L  A  +L       + VV+    L GI+TEGDI R           
Sbjct: 8   MSAPAIVARDTETLPRARELLIAAGIRRLPVVNAAGDLVGIVTEGDINRVSDSPERDDQA 67

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            N +  ++ L + +VM +    +  DT L  A  LL    IS   VV +  + +G++   
Sbjct: 68  YNLYYRVHDLPLREVMRRPVITVTPDTPLHEAAHLLLAWRISGFPVVSE-GRVVGVITAS 126

Query: 334 DLLR 337
           D+LR
Sbjct: 127 DMLR 130



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 23/54 (42%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V+  M     V  +   L  A +LL    I  L VV+     +GIV   D+ R
Sbjct: 3   TVKAWMSAPAIVARDTETLPRARELLIAAGIRRLPVVNAAGDLVGIVTEGDINR 56



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    PL +A  +L   R     VV E  ++ G+IT  D+ R  
Sbjct: 83  MRRPVITVTPDTPLHEAAHLLLAWRISGFPVVSE-GRVVGVITASDMLRRI 132


>gi|288931427|ref|YP_003435487.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288893675|gb|ADC65212.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 136

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNT 282
               +  V     + +A   + EK   C  VV+   +  G+ITEG + R      KD   
Sbjct: 11  MNKDVTKVFEDESVHEATKKMVEKGVKCAVVVNNKGEPVGVITEGTVTRKVLLACKDPRE 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+D+M K    I  D  L  A +   ++++  L V ++  K +G +    +L+ 
Sbjct: 71  VKVKDIMSKPIITIKADATLKEASEAFLKYDVKQLYV-EEDGKIVGFLTEHRILKA 125



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 27/50 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           TL V D+M K+   + ED  +  A + + +  +   +VV++  + +G++ 
Sbjct: 4   TLRVRDIMNKDVTKVFEDESVHEATKKMVEKGVKCAVVVNNKGEPVGVIT 53


>gi|291287160|ref|YP_003503976.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884320|gb|ADD68020.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 625

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKD 279
            +    +  VK    + DA  ++S  + G V V  E  +  G+IT   +          D
Sbjct: 154 TYMMSPVMTVKEDDNIKDAAVLMSRHKIGSVVVTCEHNRFIGVITAKSVIYRLFNDGSCD 213

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V+D M  NP  +  +  L  A+  +++ +    +VV + +  +GI+   D+LR 
Sbjct: 214 IVCTDVKDYMTPNPVHLSPEHPLVNALSEMQKQDEDYAVVVRNSE-PVGIISGKDILRI 271



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 23/49 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            SV   M+     + ED  +  A  L+ +H I  ++V  +  + IG++ 
Sbjct: 150 KSVGTYMMSPVMTVKEDDNIKDAAVLMSRHKIGSVVVTCEHNRFIGVIT 198


>gi|307726882|ref|YP_003910095.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1003]
 gi|307587407|gb|ADN60804.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1003]
          Length = 286

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 46/200 (23%), Positives = 76/200 (38%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGLPYSSAAIARDDDVQTLMDKVGEAAVEGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A  L      +     A       GM+   D+   +
Sbjct: 128 LASAR-RVFFFGVGSGSGLVAQDAALRLLRLDIAASAFTDAHLQRLYAGMMEPGDVAFGI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A  ADI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLADIALLLRVPSPVDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|167720783|ref|ZP_02404019.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei DM98]
          Length = 586

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|161528181|ref|YP_001582007.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160339482|gb|ABX12569.1| putative signal-transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 165

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 61/142 (42%), Gaps = 4/142 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F  ++    H   KL               ++  VK+   L +    + E+  GCV VVD
Sbjct: 3   FRNDNLKSNHIVNKLKKYVENTFVNQIMSKNVLTVKVSETLEEVAKKMKEENVGCVIVVD 62

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +   L GI+TE D        +      + +VM      I  ++ +  A +++++ +I  
Sbjct: 63  KIATL-GIVTERDFVTKIVAERKTPHTKIFEVMSSPLITIKSESTIWEAAEIMKEKSIHK 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L V++D +  +GI+   D++R 
Sbjct: 122 LPVIEDEE-IVGIITTTDIVRI 142


>gi|14194865|sp|Q9KH33|IMDH_RHITR RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|9230745|gb|AAF85967.1| GuaB [Rhizobium tropici]
          Length = 498

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 6/165 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ ++          L P  +   +            +   
Sbjct: 46  NVPILSAAMDTVTESRLAIAMAQAGGMGVIH-RNLTPVQQAEEVRQVKKFESGMVVNPVT 104

Query: 233 VKIGCPLIDAITILSE-KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +     L +A+++    + F    VV++  +L GI+T  D+            + ++M +
Sbjct: 105 IGPDATLAEALSLDEGPRHFRASPVVEKSHRLVGILTNRDVRFASDP---EQKIYELMTR 161

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            N   + +      A +LL  H I   +VVD   + +G++   D+
Sbjct: 162 ENLVTVKDGVQQHEAKRLLHTHRIEKXLVVDADSRFVGLITVKDI 206


>gi|332087874|gb|EGI92999.1| helix-turn-helix domain, rpiR family protein [Shigella boydii
           5216-82]
          Length = 285

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+  + +++   R +  EK    +LE +       +    +E I      + ITG+G S 
Sbjct: 91  SITSDDSLEVIARKLNREKE--LALEQTCALFDFARLQKIIEVISKAP-FIQITGLGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGYRVACEADTHVQATVSQALKKGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   A   L             +  ++   Q ++ D L + L++
Sbjct: 208 QGATVIAITSLADSRLRRLAHFTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGLVQ 264


>gi|302549210|ref|ZP_07301552.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302466828|gb|EFL29921.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 223

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               +  V+   P      +L++     + VVDE     G+++E D+ R           
Sbjct: 10  MTRPVVRVRRDTPFKGVAGLLADHDVTALPVVDELDHPIGVVSEADLLRTIAARPDPNGL 69

Query: 280 ------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                        +  +  ++M         +  +  A +L+    +  L VVD+    I
Sbjct: 70  SLPPAPVDGTLSADGTTAGELMTAPAVCARPEWTVVEAARLMDVEGVKRLPVVDEAGTLI 129

Query: 328 GIVHFLDLLR 337
           GIV   DLLR
Sbjct: 130 GIVSRGDLLR 139



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++ ++M +    +  DT       LL  H+++ L VVD+    IG+V   DLLR
Sbjct: 1   MQHRTIGELMTRPVVRVRRDTPFKGVAGLLADHDVTALPVVDELDHPIGVVSEADLLR 58



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    +++A  ++  +    + VVDE   L GI++ GD+ R F +    LS +++  ++ 
Sbjct: 99  RPEWTVVEAARLMDVEGVKRLPVVDEAGTLIGIVSRGDLLRVFLRRDEALS-DEI-TRDV 156

Query: 294 KV 295
             
Sbjct: 157 LT 158


>gi|258405759|ref|YP_003198501.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257797986|gb|ACV68923.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 597

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 52/116 (44%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
              S+P + I   L   +    +  F    V  E  KL G+++  D+ +    F  + + 
Sbjct: 461 MRRSVPRLPITATLGAIVAATEQTAFPHFVVEQEQNKLAGVLSLRDLRKALLQFEANKDH 520

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LS  D+M +N   +  +  +  A+ L  +++ S+  VVD     +GI+   D+L+ 
Sbjct: 521 LSAGDLMSRNVITVERNDSVEKALHLFEEYHYSMFPVVDQDNTVVGILTKDDVLKA 576



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V+    +  A+ +  E  +    VVD+   + GI+T+ D+ + + + +    V
Sbjct: 527 MSRNVITVERNDSVEKALHLFEEYHYSMFPVVDQDNTVVGILTKDDVLKAYDQKVLKDRV 586


>gi|220908951|ref|YP_002484262.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
 gi|219865562|gb|ACL45901.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
          Length = 1428

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V     +++ I ++ +   G  A+V    +L GI +  D+ R      DL    + +VM 
Sbjct: 24  VPPETSVLEVIRLMHQT--GKCALVIAETQLCGIFSHQDVVRAAATGMDLTATPIAEVMT 81

Query: 291 KNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +    +    +  L  A+  + +H I  L V++   + IG++   D L  G+
Sbjct: 82  QPVVTLAWSAEMTLQTALSGMAEHQIHHLPVLNQDDRLIGLLT-QDALLQGL 132


>gi|167837539|ref|ZP_02464422.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia thailandensis MSMB43]
          Length = 600

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|21227420|ref|NP_633342.1| hypothetical protein MM_1318 [Methanosarcina mazei Go1]
 gi|20905786|gb|AAM31014.1| conserved protein [Methanosarcina mazei Go1]
          Length = 364

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I  + EK+     VV E   LKGI+T  DI R    D   + V D+M ++
Sbjct: 255 VPPSMNVEDLIQFMFEKKHMGYPVV-ESGNLKGIVTFTDIQRVPTIDRPVMRVSDIMTRD 313

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  D   +  ++L+   NI  ++V+D+    +G++   DL+R 
Sbjct: 314 IISVPSDAQASDVLKLVTSKNIGRVLVIDN-GSLVGVLSRTDLVRI 358



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + V+D+M K    +     +   +Q + +       VV +     GIV F D+ R
Sbjct: 239 LENILVKDIMTKEVVSVPPSMNVEDLIQFMFEKKHMGYPVV-ESGNLKGIVTFTDIQR 295



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V       D + +++ K  G V V+D    L G+++  D+ R  
Sbjct: 317 VPSDAQASDVLKLVTSKNIGRVLVID-NGSLVGVLSRTDLVRIL 359


>gi|115438763|ref|NP_001043661.1| Os01g0634900 [Oryza sativa Japonica Group]
 gi|55296012|dbj|BAD68903.1| CBS domain protein-like [Oryza sativa Japonica Group]
 gi|55296028|dbj|BAD69439.1| CBS domain protein-like [Oryza sativa Japonica Group]
 gi|113533192|dbj|BAF05575.1| Os01g0634900 [Oryza sativa Japonica Group]
 gi|125571300|gb|EAZ12815.1| hypothetical protein OsJ_02734 [Oryza sativa Japonica Group]
          Length = 258

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 239 LIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK-- 291
           + +AI  ++    G + V+   + ++L GI+TE D  R      +      V D+M +  
Sbjct: 133 VHEAIKHMTAHNVGALVVLKSGDEKQLAGIVTERDFARKILLPGRPSEETRVGDIMTEED 192

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +  +T +  AM+L+ + +I  + V D+  K +G++   D+++
Sbjct: 193 KLITVSSNTNILQAMELMTERHIRHVPVFDE--KVVGMITIGDVVK 236



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF          +      D+M   D +  V     ++ A+ +++E+    V V DE
Sbjct: 164 TERDFARKILLPGRPSEETRVGDIMTEEDKLITVSSNTNILQAMELMTERHIRHVPVFDE 223

Query: 260 GQKLKGIITEGDIFRNF 276
             K+ G+IT GD+ +  
Sbjct: 224 --KVVGMITIGDVVKTI 238


>gi|85703241|ref|ZP_01034345.1| Putative inosine-5'-monophosphate dehydrogenase [Roseovarius sp.
           217]
 gi|85672169|gb|EAQ27026.1| Putative inosine-5'-monophosphate dehydrogenase [Roseovarius sp.
           217]
          Length = 482

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI++ +S        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEGRMAISMAQSGGMGVIHRNLTIEEQAREVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +          VVDE  ++ GI+T  D+   F +D +   V  +M 
Sbjct: 99  T---PDQTLADAKALQERYNVTGFPVVDETGRVVGIVTNRDMR--FAED-DRTPVRVMMT 152

Query: 291 KNPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            N   IL++      A  L++   I  L+V D   K  G++   D
Sbjct: 153 SNDLAILQEPADRDEAKSLMKARRIEKLLVTDKAGKLTGLLTLRD 197



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++N++   VVD+  + +GIV   D+
Sbjct: 94  NPITLTPDQTLADAKALQERYNVTGFPVVDETGRVVGIVTNRDM 137


>gi|312137369|ref|YP_004004706.1| 3-hexulose-6-phosphate isomerase [Methanothermus fervidus DSM 2088]
 gi|311225088|gb|ADP77944.1| 3-hexulose-6-phosphate isomerase [Methanothermus fervidus DSM 2088]
          Length = 194

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 69/198 (34%), Gaps = 24/198 (12%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
               +I      +  ++S +    +      VE I   +  V + G G+SG +    A  
Sbjct: 2   IIKEAINEIINSVKKIQSEIDYSAA---EKMVELILNSEN-VFVIGAGRSGLVAKAFAMR 57

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G   + V            I + D +I +S SG +  +      A++    +I+IT
Sbjct: 58  LMHLGISVYVVGETITP-----AIRKGDSLIAISGSGETIYVVNAAKIAKKRGSKIISIT 112

Query: 146 SENKSVVACHADIVLTLP-------------KEPESCPHGLAPTTSAIM--QLAIGDALA 190
           S   S +   +D+ + +              ++ +     +AP  +      L   D + 
Sbjct: 113 SYPNSTLGKLSDLTIVIKGRTKIDKEKDYLTRQIKGQHISMAPLGTIFEISCLVFLDGVV 172

Query: 191 IALLESRNFSENDFYVLH 208
             L+   + +E D    H
Sbjct: 173 AELMTRMSKTEEDLRKKH 190


>gi|308049485|ref|YP_003913051.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Ferrimonas balearica DSM 9799]
 gi|307631675|gb|ADN75977.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ferrimonas balearica DSM 9799]
          Length = 627

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 12/139 (8%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--------DEGQ 261
               G                  V     +  A  ++ ++    + VV        +E  
Sbjct: 140 NQAKGNDLTTVKARKLITREPVTVCPDTTIQAAAQLMEDESVTALLVVRHLDEGDEEEAD 199

Query: 262 KLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            L GI+TE D+  R     LN    +V DVM  +   +  +T +  AM ++ ++N+  L 
Sbjct: 200 TLVGILTEHDLCVRVLAAGLNAADTTVADVMSTDVVSLDYNTYVFEAMLMMLRYNLHHLP 259

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           +    +K IGI+   D+LR
Sbjct: 260 I-RKDKKVIGIIGMTDILR 277



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 12/78 (15%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQKA 326
               DL T+    ++ + P  +  DT +  A QL+   +++ L+VV        ++    
Sbjct: 142 AKGNDLTTVKARKLITREPVTVCPDTTIQAAAQLMEDESVTALLVVRHLDEGDEEEADTL 201

Query: 327 IGIVHFLDL----LRFGI 340
           +GI+   DL    L  G+
Sbjct: 202 VGILTEHDLCVRVLAAGL 219


>gi|288960546|ref|YP_003450886.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
 gi|288912854|dbj|BAI74342.1| hypothetical protein AZL_a08110 [Azospirillum sp. B510]
          Length = 233

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 25/137 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
               +  +     + +A   +       + VVD   K+ GII+EGD+ R           
Sbjct: 7   MTPRVITIGPEETIAEAARKMLANNISGMPVVDAAGKVVGIISEGDLLRRVELGTERHRS 66

Query: 281 -------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                              +   V DVM  +   + E+      ++++    I  + VV 
Sbjct: 67  WWLGLVSGGTVPAEDFIKSHARRVADVMTSHVVTVDENATPDEVVRVMETRRIKRVPVV- 125

Query: 322 DCQKAIGIVHFLDLLRF 338
                +GIV   +LLR 
Sbjct: 126 SRGALVGIVSRANLLRA 142



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   D+M      I  +  +  A + +  +NIS + VVD   K +GI+   DLLR
Sbjct: 1   MKAIDLMTPRVITIGPEETIAEAARKMLANNISGMPVVDAAGKVVGIISEGDLLR 55


>gi|15791000|ref|NP_280824.1| hypothetical protein VNG2168C [Halobacterium sp. NRC-1]
 gi|169236748|ref|YP_001689948.1| metalloprotease [Halobacterium salinarum R1]
 gi|10581585|gb|AAG20304.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727814|emb|CAP14602.1| putative metalloprotease [Halobacterium salinarum R1]
          Length = 390

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 2/135 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                     V  +DVM     +  V     + D +  + E R     V  +     G++
Sbjct: 239 RTAMNAAFEGVTVADVMTPASDVHTVAATASVADLMDSMLEHRHTGYPVFRDA-TAVGMV 297

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           T  D       + + + V DVM  +   I      T A+  L++H++  L+VVD   + +
Sbjct: 298 TLDDARSVRAVERDAMRVADVMSDDVYTIPGSADATDALDALQEHSVGRLLVVDADGEMV 357

Query: 328 GIVHFLDLLRF-GII 341
           G++   DL+   GII
Sbjct: 358 GLITRSDLMDAFGII 372


>gi|15597051|ref|NP_250545.1| hypothetical protein PA1854 [Pseudomonas aeruginosa PAO1]
 gi|107101287|ref|ZP_01365205.1| hypothetical protein PaerPA_01002321 [Pseudomonas aeruginosa PACS2]
 gi|218892189|ref|YP_002441056.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa LESB58]
 gi|254234949|ref|ZP_04928272.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|9947842|gb|AAG05243.1|AE004611_8 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126166880|gb|EAZ52391.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|218772415|emb|CAW28197.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa LESB58]
          Length = 385

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L E R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 8/79 (10%)

Query: 267 ITEGDIFR--------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           IT  D+ R           + +  L+   +M ++ +    +T +  A + L++H +  L 
Sbjct: 218 ITRDDLERLIHHTERYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALP 277

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+D+ ++  GIV   DLL+
Sbjct: 278 VLDEHRRLAGIVTQSDLLK 296



 Score = 39.5 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|239906344|ref|YP_002953085.1| hypothetical protein DMR_17080 [Desulfovibrio magneticus RS-1]
 gi|239796210|dbj|BAH75199.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 412

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 20/142 (14%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
                        +  V     L + + +L  +    V VVD G+K+ G++T GD+    
Sbjct: 107 RCPVRVRDVMAADVASVGPDTDLGEVVDLLVARHVKAVPVVDAGRKVLGVVTGGDLLTRG 166

Query: 274 -----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                  L+  +V++VM    + I E T L  A + + +  +  
Sbjct: 167 GLSARLSLFGLLPADAREEAAAALSGHTVKEVMTAPAETIGERTSLREASERMVKKGLKR 226

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VVD+  + IGIV   D+LR 
Sbjct: 227 LPVVDEAGELIGIVSRTDILRA 248



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 44/117 (37%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------D 279
           +     L +A   + +K    + VVDE  +L GI++  DI R   K              
Sbjct: 206 IGERTSLREASERMVKKGLKRLPVVDEAGELIGIVSRTDILRAAAKVPVGATEAMPRFTA 265

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  DV+I +      D  L      L    +  ++V+D   K  GIVH  DLL
Sbjct: 266 GLMQQARDVLITDVPTARPDESLLDVASRLVASPLRRVVVLDAAGKVAGIVHDGDLL 322



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 46/125 (36%), Gaps = 20/125 (16%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRNFHKDLNTL-- 283
           +    L+D  + L       V V+D   K+ GI+ +GD+             + L     
Sbjct: 283 RPDESLLDVASRLVASPLRRVVVLDAAGKVAGIVHDGDLLARCGPSKRPGILQALFGKKD 342

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                     +  + M      + ED  LT  +Q +  H +  L+V DD  K  G+V   
Sbjct: 343 DEAAGVCPVGTAGEAMQTTVYSVAEDAALTDVLQKMIVHGVKRLVVTDDDGKLRGMVDRE 402

Query: 334 DLLRF 338
            +LR 
Sbjct: 403 AVLRA 407



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 28/55 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           V DVM  +   +  DT L   + LL   ++  + VVD  +K +G+V   DLL  G
Sbjct: 112 VRDVMAADVASVGPDTDLGEVVDLLVARHVKAVPVVDAGRKVLGVVTGGDLLTRG 166


>gi|16126862|ref|NP_421426.1| CBS domain-containing protein [Caulobacter crescentus CB15]
 gi|13424202|gb|AAK24594.1| CBS domain protein [Caulobacter crescentus CB15]
          Length = 157

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
                +  A  +L  ++ G + VVD+ + + GI++E DI R   K+     T  +   M 
Sbjct: 32  SPQETVGAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVRMVAKEGAAALTKPISGCMS 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            N      D  +   ++ +    I  L VV    +  GI+   DL+++ I
Sbjct: 92  ANVVFAQPDETIDALLERMTDRRIRHLPVV-QNDRLAGIISIGDLVKYKI 140



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  +  A  LL    +  ++VVDD +  +GIV   D++R
Sbjct: 30  TASPQETVGAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVR 72


>gi|330815808|ref|YP_004359513.1| RpiR family glucokinase/transcriptional regulator [Burkholderia
           gladioli BSR3]
 gi|327368201|gb|AEA59557.1| RpiR family glucokinase/transcriptional regulator [Burkholderia
           gladioli BSR3]
          Length = 637

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 418 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEHAIDILNNAR-RIEFY 473

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 474 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 533

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 534 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 590

Query: 191 IALLESR 197
           + +   R
Sbjct: 591 VGVAIRR 597


>gi|162450601|ref|YP_001612968.1| CBS domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161161183|emb|CAN92488.1| CBS domain protein [Sorangium cellulosum 'So ce 56']
          Length = 146

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I  V     +  A   + +   G + V D   ++ G +T+ D+      H    + 
Sbjct: 7   MKQDIQSVLADDTIQTAACKMRDANIGFLPVCDSAGRVLGALTDRDLAIRVLAHNRPLST 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              DVM +       D  +  A QL+ QH+ S ++  +   + +GI+   D+ +
Sbjct: 67  KAGDVMTRGVVACRPDDDVQRAEQLMGQHHKSRVLCTEADGRLVGIISLSDIAQ 120



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++M ++ + +L D  +  A   +R  NI  L V D   + +G +   DL
Sbjct: 4   KEIMKQDIQSVLADDTIQTAACKMRDANIGFLPVCDSAGRVLGALTDRDL 53


>gi|157690954|ref|YP_001485416.1| transcriptional regulator [Bacillus pumilus SAFR-032]
 gi|157679712|gb|ABV60856.1| transcriptional regulator [Bacillus pumilus SAFR-032]
          Length = 289

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 30/191 (15%), Positives = 73/191 (38%), Gaps = 5/191 (2%)

Query: 7   HFKSVTRKGHSLMKNS-TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
                 ++G+  ++    +Q  ++        + S++ +     +     AV+ +     
Sbjct: 75  DLMHSDKQGYRDIEQDEPIQSIIQ--KTAGNSIQSIKDTASILNADALEKAVQLLLHA-N 131

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           ++   G+G SG + +            +        +   +     +D++  +S+SG + 
Sbjct: 132 QIHFIGVGASGIVAADAQQKFLRINYAATAFTDMHIASTVIANAGENDIVFGISFSGETL 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A+   +  IA+T    + V+   D+ L+        P   A T+S + QL +
Sbjct: 192 DIIQALQLAKDNGVKTIALTHPGHTSVSALCDVHLSTS-GSNEAPFRSAATSSRMAQLYL 250

Query: 186 GDALAIALLES 196
            D L ++L   
Sbjct: 251 IDVLFLSLASR 261


>gi|148643451|ref|YP_001273964.1| sugar phosphate isomerase [Methanobrevibacter smithii ATCC 35061]
 gi|148552468|gb|ABQ87596.1| predicted sugar phosphate isomerase involved in capsule formation,
           GutQ [Methanobrevibacter smithii ATCC 35061]
          Length = 196

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI A    +   E  L  +   +F    + I   K  V +TG G+SG      A  L   
Sbjct: 7   SIKAILDNIVCAEEFLDEDAINEFE---DIIMNSKN-VFVTGAGRSGLAAKAFAMRLMHL 62

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  S+ V    +       I  DD II +S SG ++ + +    A+     ++A+TS  +
Sbjct: 63  GISSYVVGETISP-----AIYDDDCIIAISGSGETNTIVSAARIAKNRGSKVLAVTSYPE 117

Query: 150 SVVACHADIVLTLP----------------KEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           S +   AD  L +                             T   +  L   DA+   L
Sbjct: 118 STLGQLADGHLLVKGRTKKEVDDQNYMKRQIYGNYTSLTPLGTAFELTTLVFLDAIVSEL 177

Query: 194 LESRNFSENDFYVLH 208
           +E  + +E+D    H
Sbjct: 178 MEKMHQTESDLKSRH 192


>gi|13620228|emb|CAC36403.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 79.6 bits (195), Expect = 7e-13,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 30/130 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------D 279
           V     + +A+  + + R  CV VVD    L+GI+T GD+ R+  K             D
Sbjct: 587 VSPSQTVKEALECMHDGRQSCVLVVDAEGYLEGILTYGDVKRSLFKNHGDSSNKDLSVTD 646

Query: 280 LNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ------ 324
            NT  V  +  K                DT L +A QL+    I  L VV          
Sbjct: 647 ANTCLVSSICTKGISYRGQDCGLLTCYPDTDLAIAKQLMEAKGIKQLPVVKRGGEFRRER 706

Query: 325 --KAIGIVHF 332
             + I ++H+
Sbjct: 707 KRRVIALLHY 716



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  L V   M  +   +     +  A++ +     S ++VVD      GI+ + D+ R
Sbjct: 571 LEDLKVSQAMSNDYLKVSPSQTVKEALECMHDGRQSCVLVVDAEGYLEGILTYGDVKR 628


>gi|67643967|ref|ZP_00442710.1| bifunctional protein glk [Burkholderia mallei GB8 horse 4]
 gi|254202401|ref|ZP_04908764.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei FMH]
 gi|254207732|ref|ZP_04914082.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei JHU]
 gi|147746648|gb|EDK53725.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei FMH]
 gi|147751626|gb|EDK58693.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei JHU]
 gi|238525442|gb|EEP88870.1| bifunctional protein glk [Burkholderia mallei GB8 horse 4]
          Length = 620

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|323351071|ref|ZP_08086728.1| CBS domain protein [Streptococcus sanguinis VMC66]
 gi|322122795|gb|EFX94504.1| CBS domain protein [Streptococcus sanguinis VMC66]
 gi|324991359|gb|EGC23292.1| CBS domain protein [Streptococcus sanguinis SK353]
 gi|324993712|gb|EGC25631.1| CBS domain protein [Streptococcus sanguinis SK405]
 gi|324994975|gb|EGC26888.1| CBS domain protein [Streptococcus sanguinis SK678]
 gi|325687061|gb|EGD29084.1| CBS domain protein [Streptococcus sanguinis SK72]
 gi|325696296|gb|EGD38187.1| CBS domain protein [Streptococcus sanguinis SK160]
          Length = 218

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPNTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  +T +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPNTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|319940760|ref|ZP_08015100.1| hypothetical protein HMPREF9464_00319 [Sutterella wadsworthensis
           3_1_45B]
 gi|319805780|gb|EFW02556.1| hypothetical protein HMPREF9464_00319 [Sutterella wadsworthensis
           3_1_45B]
          Length = 143

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLN 281
            +   + ++     + ++   +  +  G + VVD+  K  G++T+ DI         D++
Sbjct: 1   MAVHKVAIITPEKSIRESARQMRVEHVGSLVVVDQDGKPIGMLTDRDITIEGVARGVDVD 60

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +V D+M        E   +  A+  +R+  I  L ++D   K +G+V   +L++ 
Sbjct: 61  QTTVRDLMTAPVVTATESEGMVTALARMREFGIRRLPIIDSEGKLVGVVTNSNLIKE 117



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           I  +  +  + + +R  ++  L+VVD   K IG++   D+   G+
Sbjct: 9   ITPEKSIRESARQMRVEHVGSLVVVDQDGKPIGMLTDRDITIEGV 53


>gi|310779055|ref|YP_003967388.1| CBS domain containing protein [Ilyobacter polytropus DSM 2926]
 gi|309748378|gb|ADO83040.1| CBS domain containing protein [Ilyobacter polytropus DSM 2926]
          Length = 857

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +   L DA  I++   +  + VV E  KL GII+  DI R+         V
Sbjct: 314 MSTPVKTITMETRLRDAHKIMTRFGYTGLPVV-EDGKLAGIISRRDIDRSMGHGFANAPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  M        E+T +    QLL ++ +  + ++    K +GIV   D+LRF
Sbjct: 373 KVYMTSKLITASEETSIEDLKQLLVENEVGRIPIL-RGDKLVGIVTRADILRF 424



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/65 (21%), Positives = 30/65 (46%), Gaps = 2/65 (3%)

Query: 272 IFRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +     K++    + +++M    K I  +T L  A +++ +   + L VV +  K  GI+
Sbjct: 296 LREIILKNVKKGKTTKEIMSTPVKTITMETRLRDAHKIMTRFGYTGLPVV-EDGKLAGII 354

Query: 331 HFLDL 335
              D+
Sbjct: 355 SRRDI 359


>gi|300854341|ref|YP_003779325.1| putative PpiR family transcriptional regulator [Clostridium
           ljungdahlii DSM 13528]
 gi|300434456|gb|ADK14223.1| predicted transcription regulator, PpiR family [Clostridium
           ljungdahlii DSM 13528]
          Length = 285

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 65/159 (40%), Gaps = 1/159 (0%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            + S++ ++    S +   AV+ I   K +++  G+G S  +          TG P    
Sbjct: 108 SIHSIQKAISMNESTEMEKAVKLILNAK-KLMFFGMGGSWIVALDAYHEFIRTGIPCVCN 166

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +        M  R+D+I   S SGS+ +L   +   ++    +I+ITS  KS +   +
Sbjct: 167 SDSHWQVMYAAMAERNDVIFAFSTSGSNKDLIDSIKVGKKNGAKIISITSNQKSPLQKIS 226

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           DI+LT   +          +    + L     +++AL  
Sbjct: 227 DILLTSYGKESMVRSEAMESRITSLVLINSLFVSVALKR 265


>gi|268324813|emb|CBH38401.1| conserved hypothetical protein containing CBS domain pair
           [uncultured archaeon]
          Length = 160

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 52/135 (38%), Gaps = 32/135 (23%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---------------- 277
           K    +          R     V+D+ +K+ G+I+E DI +                   
Sbjct: 21  KPSDKVHQVAETFRSNRISGAPVIDDQRKVIGVISEADIMKLTATVPFPDIDPLNPFPVF 80

Query: 278 ----------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                           + L   SV+DVM K+P  I  D  +  A +L+ + + + + VVD
Sbjct: 81  SLTAYRKKVEKIPDEIETLFEGSVKDVMTKDPVTISPDDSILDAARLMHKGDFNRIPVVD 140

Query: 322 DCQKAIGIVHFLDLL 336
           D  K +G++   D++
Sbjct: 141 DEGKLVGLIARADII 155



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V ++M  +         +    +  R + IS   V+DD +K IG++   D+++ 
Sbjct: 8   KVRELMTTDVIAFKPSDKVHQVAETFRSNRISGAPVIDDQRKVIGVISEADIMKL 62



 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                  +     ++DA  ++ +  F  + VVD+  KL G+I   DI
Sbjct: 108 MTKDPVTISPDDSILDAARLMHKGDFNRIPVVDDEGKLVGLIARADI 154


>gi|226506150|ref|NP_001147441.1| cystathionin beta synthase protein [Zea mays]
 gi|195611422|gb|ACG27541.1| cystathionin beta synthase protein [Zea mays]
          Length = 227

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 63/157 (40%), Gaps = 31/157 (19%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                  D M + D++ +V+   P+  A+ +L + R     VVD+   L G++++ D+  
Sbjct: 61  HSNYTVGDFMTTRDNLHVVQPTTPVDQALELLVQHRISGFPVVDDDWNLVGVVSDYDLLA 120

Query: 274 ------------------------RNFHKDLNTLS------VEDVMIKNPKVILEDTLLT 303
                                   + FH+    LS      + DVM  +P  +  +T L 
Sbjct: 121 LDSMSGNELADTSTNMFPDVDSTWKTFHELQRILSKTNGKVIGDVMTSSPLAVRINTNLD 180

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            A +LL +     L VVD   K +G++   +++   +
Sbjct: 181 AATRLLLETKYRRLPVVDSMGKLVGMITRGNVVSAAL 217


>gi|167580943|ref|ZP_02373817.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia thailandensis TXDOH]
          Length = 620

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|83719951|ref|YP_442094.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia thailandensis E264]
 gi|119370099|sp|Q2SYA5|GLK_BURTA RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|83653776|gb|ABC37839.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia thailandensis E264]
          Length = 641

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|251809994|ref|ZP_04824467.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|293367954|ref|ZP_06614591.1| SIS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|251806537|gb|EES59194.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|291317911|gb|EFE58320.1| SIS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 187

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+S+L    + ++      +     R+   G G+SG + +  A  L   G  ++ V 
Sbjct: 16  LEELDSTLSQVDNTEYERFANDVIGAD-RIFTAGKGRSGFVANSFAMRLNQLGKNAYVVG 74

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+  +S +   A+
Sbjct: 75  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSEGAKIVLLTTNAESPIGNLAE 129

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 130 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSVVLPLMDAFHISEKTMQENH 183


>gi|227892185|ref|ZP_04009990.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           ATCC 11741]
 gi|227865990|gb|EEJ73411.1| RpiR family transcriptional regulator [Lactobacillus salivarius
           ATCC 11741]
          Length = 276

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           +   H  V  I   + RV + G+G SG+   +    L   G  +F    +     D  ++
Sbjct: 112 TDTIHNIVHAITKAR-RVYVYGLGSSGYTAQEFTQRLIRMGIAAFCTVDSHMMFIDSTIV 170

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             DD+II +S SG++D++      A++    +I+IT   +S +   +    +   +  + 
Sbjct: 171 NSDDVIIAISQSGNTDDVNVACSLAKQKGTKIISITGFYQSPLIELSTW--SAVVKNSNF 228

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                   S +  + + D + + L+E   +S 
Sbjct: 229 VDNTRFINSQLAIVYVIDIITMELMEKSEYSS 260


>gi|289209074|ref|YP_003461140.1| inosine-5'-monophosphate dehydrogenase [Thioalkalivibrio sp.
           K90mix]
 gi|288944705|gb|ADC72404.1| inosine-5'-monophosphate dehydrogenase [Thioalkalivibrio sp.
           K90mix]
          Length = 486

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
            AP  SA M       LAIA+ +          ++H    +         V         
Sbjct: 40  SAPVVSAAMDTVTEARLAIAMAQEGGLG-----IVHKNMSIEAQAAEVQQVKKYESGVIS 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + + + +        V VVD G  L GI+T  D+     +      V ++
Sbjct: 95  EPITIGPSATIGEVVELTQANHISGVPVVD-GNDLVGIVTSRDLRF---ETRMEAPVTEI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E       ++LL +H I  ++VV+D  +  G++   D+ +
Sbjct: 151 MTPRERLVTVPEGADRGHVLELLHKHRIEKVLVVNDDFQLRGMITVKDIQK 201


>gi|167903850|ref|ZP_02491055.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei NCTC 13177]
          Length = 617

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|167619035|ref|ZP_02387666.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia thailandensis Bt4]
 gi|257138280|ref|ZP_05586542.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia thailandensis E264]
          Length = 620

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|154685914|ref|YP_001421075.1| YlbB [Bacillus amyloliquefaciens FZB42]
 gi|154351765|gb|ABS73844.1| YlbB [Bacillus amyloliquefaciens FZB42]
          Length = 147

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 45/100 (45%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + +VDE    L GI+T+ D+       K  N+  + D M +    
Sbjct: 21  VYEAAVKMKDADVGAIPIVDEDGATLVGIVTDRDLVLRGIASKKPNSQKITDAMTERVIS 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ED  +   + L+ +H +  + V    +K +GIV   DL
Sbjct: 81  AEEDASVEEVLHLMAEHQLRRIPVT-RDKKLVGIVTLGDL 119


>gi|53725955|ref|YP_103702.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia mallei ATCC 23344]
 gi|81604470|sp|Q62HW8|GLK_BURMA RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|52429378|gb|AAU49971.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei ATCC 23344]
          Length = 641

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|21227405|ref|NP_633327.1| hypothetical protein MM_1303 [Methanosarcina mazei Go1]
 gi|20905769|gb|AAM30999.1| conserved protein [Methanosarcina mazei Go1]
          Length = 333

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/202 (17%), Positives = 73/202 (36%), Gaps = 10/202 (4%)

Query: 144 ITSENKSVVACHADIVLTLP---------KEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           I+     ++A     V+TLP         K          P T+A      G   ++ ++
Sbjct: 53  ISEHEGKILALATRNVVTLPPTATIMEAIKIMTERRFRRIPITNAGTGRLEGVITSVDII 112

Query: 195 ESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           +       +  V +         +          +   +       +A+  + E+R G +
Sbjct: 113 DFLGGGSRNLLVTNRFKGNLLAAINEEVRQIMDTNAAYIHDQADFKEAVKTMLERRTGGL 172

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +V+   ++  I TE +        +   +V++ M KN  ++  DT +  A +++ Q+  
Sbjct: 173 PIVNSEMQVVAIFTERNAVELMAGLVTNKTVDEYMTKNVTMVTTDTTIGQAAKVMVQNRF 232

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
             L VV       GIV   D++
Sbjct: 233 RRLPVV-KDGIFAGIVTASDIV 253



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 52/147 (35%), Gaps = 15/147 (10%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   +    +  L    +   +   ++ +V     +  A  ++ + RF  + VV +    
Sbjct: 185 FTERNAVELMAGLVTNKTVDEYMTKNVTMVTTDTTIGQAAKVMVQNRFRRLPVV-KDGIF 243

Query: 264 KGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            GI+T  DI     K                   V  ++ K        T +  AM+++ 
Sbjct: 244 AGIVTASDIVHFMGKGDAFSKLTTGNIHEALDQPVGSIISKELIWTSPGTDMGKAMEIML 303

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  I  L ++++     GI+   D LR
Sbjct: 304 EKKIGSLPILEE-GMLRGIITESDFLR 329



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  +  A+ I+ EK+ G + ++ E   L+GIITE D  R F 
Sbjct: 290 SPGTDMGKAMEIMLEKKIGSLPIL-EEGMLRGIITESDFLRGFD 332


>gi|15839021|ref|NP_299709.1| inosine 5'-monophosphate dehydrogenase [Xylella fastidiosa 9a5c]
 gi|9107621|gb|AAF85229.1|AE004052_4 inosine-5'-monophosphate dehydrogenase [Xylella fastidiosa 9a5c]
          Length = 485

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 42/203 (20%), Positives = 80/203 (39%), Gaps = 14/203 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++ S+V  H+ ++   + L            P  SA M       LAI + +    
Sbjct: 8   ALTYDDVSLVPSHSTVLPKDVNLETRLTRNIRLKLPVLSAAMDTVTEARLAIVMAQLGGI 67

Query: 200 S--ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +  +     ++  +    S V+        V     + D + +   K    V VV
Sbjct: 68  GIIHKNLTIEQQVAEVTKVKKYESGVIR---DPITVDPETSIRDVLALTRAKNISGVPVV 124

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNIS 315
           D+  +L G++T  D+   F  +L+   V  +M K      + E       +QLL +H I 
Sbjct: 125 DK-GQLIGLVTHRDMR--FESELDD-PVRHIMTKKEALVTVKEGADSQEVLQLLHKHRIE 180

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            ++VV+D  +  G++   D+ + 
Sbjct: 181 KILVVNDAFELRGLITVKDIQKK 203


>gi|121600800|ref|YP_992123.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia mallei SAVP1]
 gi|124384652|ref|YP_001028569.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia mallei NCTC 10229]
 gi|126448073|ref|YP_001081534.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia mallei NCTC 10247]
 gi|254175399|ref|ZP_04882059.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei ATCC 10399]
 gi|254191839|ref|ZP_04898342.1| glucokinase [Burkholderia pseudomallei Pasteur 52237]
 gi|254298884|ref|ZP_04966334.1| glucokinase [Burkholderia pseudomallei 406e]
 gi|254356368|ref|ZP_04972644.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei 2002721280]
 gi|121229610|gb|ABM52128.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei SAVP1]
 gi|124292672|gb|ABN01941.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei NCTC 10229]
 gi|126240943|gb|ABO04036.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei NCTC 10247]
 gi|148025365|gb|EDK83519.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei 2002721280]
 gi|157808830|gb|EDO86000.1| glucokinase [Burkholderia pseudomallei 406e]
 gi|157939510|gb|EDO95180.1| glucokinase [Burkholderia pseudomallei Pasteur 52237]
 gi|160696443|gb|EDP86413.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei ATCC 10399]
          Length = 620

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|324324763|gb|ADY20023.1| CBS domain protein [Bacillus thuringiensis serovar finitimus
           YBT-020]
          Length = 139

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 51/112 (45%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM KN   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTKNIVSVSPDDAIEKATELMAQYQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|296112718|ref|YP_003626656.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis RH4]
 gi|295920412|gb|ADG60763.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis RH4]
 gi|326560972|gb|EGE11337.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis 7169]
 gi|326563792|gb|EGE14043.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis
           46P47B1]
 gi|326563961|gb|EGE14211.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis
           12P80B1]
 gi|326566805|gb|EGE16944.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis
           103P14B1]
 gi|326567355|gb|EGE17470.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC1]
 gi|326569871|gb|EGE19921.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC8]
 gi|326571523|gb|EGE21538.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis BC7]
 gi|326575196|gb|EGE25124.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis CO72]
 gi|326576718|gb|EGE26625.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis
           101P30B1]
 gi|326577607|gb|EGE27484.1| inosine-5'-monophosphate dehydrogenase [Moraxella catarrhalis O35E]
          Length = 490

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 64/173 (36%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ +          ++H    +         V      +  
Sbjct: 41  NLPIISAAMDTVTESKMAIAMAQLGG-----MGIIHKNMDIAHQARRVRHVKKFEAGTVA 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + D + +  E +   V VV+ G  K+ GI+T  D+   F  +L +  V +
Sbjct: 96  DPITVTADATVGDLLALTREHKISGVPVVEAGTNKVVGIVTHRDLR--FETNL-SQPVAN 152

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM        + E        +LL +H I  ++V+DD  +  G++   D  + 
Sbjct: 153 VMTPKDKLVTVKEGETQERIKELLHRHRIEKVVVIDDDYQLKGLITVNDFSKA 205


>gi|254487752|ref|ZP_05100957.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. GAI101]
 gi|214044621|gb|EEB85259.1| inosine-5'-monophosphate dehydrogenase [Roseobacter sp. GAI101]
          Length = 451

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 62/165 (37%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 8   NIPLLSSAMDTVTESRMAIAMAQAGGMGVVHRNLTIAEQAEEVRRVKRFESGIVYNPITL 67

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +          VVDE  ++ GI+T  D+      D     V  +M 
Sbjct: 68  ---RADQTLADAKALQQRYNVTGFPVVDEKGRVVGIVTNRDMRFATADD---TPVRLMMS 121

Query: 291 KNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   I  E      A+ L++   I  L+V D   K  G++   D
Sbjct: 122 SDNLAILHEPADREEAISLMKARRIEKLLVTDAQGKLTGLLTLKD 166



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 24/44 (54%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L +++N++   VVD+  + +GIV   D+
Sbjct: 63  NPITLRADQTLADAKALQQRYNVTGFPVVDEKGRVVGIVTNRDM 106


>gi|163785914|ref|ZP_02180362.1| CBS domain pair protein [Flavobacteriales bacterium ALC-1]
 gi|159877774|gb|EDP71830.1| CBS domain pair protein [Flavobacteriales bacterium ALC-1]
          Length = 621

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V           I+  K    + V++    L G+I  G   R   ++L+   S++D+M+K
Sbjct: 516 VNENDSTRLVKNIMKWKNIHHLPVINNENNLVGVIASG---RLSQENLDEDTSIKDIMVK 572

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             K    +  +  A  ++ Q+ I  L V+D   + +GIV   DL +  +
Sbjct: 573 EIKTAYPEMRIDEAKDMMLQYKIGCLPVLDH-GELVGIVTTTDLEKLNL 620



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 8/51 (15%), Positives = 22/51 (43%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   +  VM      + E+    +   +++  NI  L V+++    +G++
Sbjct: 500 FSKNKIYKVMSTEIFTVNENDSTRLVKNIMKWKNIHHLPVINNENNLVGVI 550


>gi|23100262|ref|NP_693729.1| hypothetical protein OB2807 [Oceanobacillus iheyensis HTE831]
 gi|22778494|dbj|BAC14763.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 70/177 (39%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  L  SLQ     +    +E I     ++ + G G+SG IG      +   G  ++ V 
Sbjct: 11  VQELTQSLQLISENEAEKLMESITES-NKIFVAGAGRSGFIGKSFVMRMMHMGIDAYAVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
               ++     +  DDL+I+ S SG +  L +I   A++    +  +T+  +S +   AD
Sbjct: 70  ETVTAN-----LKEDDLLIIGSGSGETKTLVSIAEKAKKLRGTVAVVTTAPESTIGKLAD 124

Query: 158 IVLTLPKEPESCPHGL----APTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
           IV+ LP   +           P  S   Q  +   DAL +  +  +       Y  H
Sbjct: 125 IVVQLPGATKDRTESNYKTIQPMGSLFEQTMMLFYDALILQFMNKKGLDSQTMYGKH 181


>gi|217420694|ref|ZP_03452199.1| glucokinase [Burkholderia pseudomallei 576]
 gi|254180995|ref|ZP_04887593.1| glucokinase [Burkholderia pseudomallei 1655]
 gi|254196142|ref|ZP_04902567.1| glucokinase [Burkholderia pseudomallei S13]
 gi|169652886|gb|EDS85579.1| glucokinase [Burkholderia pseudomallei S13]
 gi|184211534|gb|EDU08577.1| glucokinase [Burkholderia pseudomallei 1655]
 gi|217396106|gb|EEC36123.1| glucokinase [Burkholderia pseudomallei 576]
          Length = 620

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|302530832|ref|ZP_07283174.1| transcriptional regulator [Streptomyces sp. AA4]
 gi|302439727|gb|EFL11543.1| transcriptional regulator [Streptomyces sp. AA4]
          Length = 333

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 63/163 (38%), Gaps = 6/163 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      L      Q    ++ +    GRV + G+G S  + + L   L   G  SF
Sbjct: 142 ARAVEETADQLD---VAQLQSVIDLVAEA-GRVDVYGVGASAFVAADLQQKLHRIGRVSF 197

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        ++   D+ I +S +G++ +    L  AR      +A+T+  +S +  
Sbjct: 198 SWSDTHIMLTSAAVLKPGDVAIGVSHTGATTDTVEALRVAREHGAVTVAVTNFPRSPITE 257

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            AD VLT      +   G   T S I QL + D L I + +  
Sbjct: 258 VADHVLTTAARETTFRSGA--TASRIAQLTVIDCLFIGVAQRH 298


>gi|188581471|ref|YP_001924916.1| signal-transduction protein with CBS domains [Methylobacterium
           populi BJ001]
 gi|179344969|gb|ACB80381.1| putative signal-transduction protein with CBS domains
           [Methylobacterium populi BJ001]
          Length = 143

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     + +AI +L+EK+ G + V D   ++ GI++E D+ R    +        +   M
Sbjct: 17  VPPHRTIDEAIHLLAEKQIGALVVGDAEGRVIGILSERDVMRALASEGASALDRPISHYM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                       +   M+ + +     L VV +    +G+V   D+++  I
Sbjct: 77  TAKVVTCTRRASIEDVMETMTEGRFRHLPVV-EDGHLVGVVSIGDVVKRRI 126



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     +  A+ LL +  I  L+V D   + IGI+   D++R 
Sbjct: 15  VTVPPHRTIDEAIHLLAEKQIGALVVGDAEGRVIGILSERDVMRA 59


>gi|91225131|ref|ZP_01260353.1| inositol-5-monophosphate dehydrogenase [Vibrio alginolyticus 12G01]
 gi|91190074|gb|EAS76345.1| inositol-5-monophosphate dehydrogenase [Vibrio alginolyticus 12G01]
          Length = 488

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + ++      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGMV---TDA 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              K   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKEKLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|302039080|ref|YP_003799402.1| hypothetical protein NIDE3802 [Candidatus Nitrospira defluvii]
 gi|300607144|emb|CBK43477.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 145

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
             D++  V      +    +LSE  FG V V +    L+G++TE D+ +     +DL  +
Sbjct: 22  MEDAVVTVSPSSSAMVVAELLSEHNFGSVPVTETDGTLRGLVTEFDLLKAVEQGRDLREV 81

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           SV ++M ++     E+  L   + +L++ ++  L VV   +K IG+V   D++
Sbjct: 82  SVSEIMTRDVITTTEEMPLMNLIHVLQERHLIRLPVV-KDRKLIGMVARRDIV 133



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  TL V  +M      +   +   V  +LL +HN   + V +      G+V   DLL+ 
Sbjct: 12  DPKTLIVRQIMEDAVVTVSPSSSAMVVAELLSEHNFGSVPVTETDGTLRGLVTEFDLLKA 71


>gi|307729355|ref|YP_003906579.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1003]
 gi|307583890|gb|ADN57288.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1003]
          Length = 486

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  V     ++  +    S V+      
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTVAEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +       VV EG +L GI+T  D+   F + L+   V ++M 
Sbjct: 97  ITVPPQMKVRDVIALSHQHGISGFPVV-EGTQLIGIVTNRDLR--FEERLDE-PVRNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 153 PRERLVTVKEGTSLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|304316260|ref|YP_003851405.1| signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
 gi|302777762|gb|ADL68321.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium thermosaccharolyticum DSM 571]
          Length = 441

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            + D   +L++       VVD+   L GI+T  ++ +    D     + D+M KNP  + 
Sbjct: 211 TVKDWKMLLNKTSHTRYPVVDDSGALVGIVTSREVAKADEGD----KIGDIMSKNPIYVT 266

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E T +  A  L+   NI VL V  + ++ +GI+   D+++ 
Sbjct: 267 ETTTVAFAAHLMIWWNIEVLPVT-NNKELVGIISREDVIKA 306


>gi|228944471|ref|ZP_04106842.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
 gi|228815139|gb|EEM61389.1| CBS domain protein [Bacillus thuringiensis serovar monterrey BGSC
           4AJ1]
          Length = 139

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 67  KITNVMTTNIISVAPDDSIEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|147920346|ref|YP_685881.1| hypothetical protein RCIX1257 [uncultured methanogenic archaeon
           RC-I]
 gi|110621277|emb|CAJ36555.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 138

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNT 282
               I  V       DA   +  +  G V VVD G  +KGI+T+  I  +     KD   
Sbjct: 7   MTSEIACVDTKSTAADAAAKMKNQNTGTVIVVD-GDSVKGIVTDRQIAIKAVAEKKDPKN 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D+M K+     E+  +  A++ + ++ +  L VV+D  + +GIV   D+ R 
Sbjct: 66  TPVSDIMTKDIVGCRENDDIFDALKTMGENKVRRLPVVNDNSQLVGIVSISDIARE 121



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 26/51 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +    + DA+  + E +   + VV++  +L GI++  DI R     ++++
Sbjct: 79  CRENDDIFDALKTMGENKVRRLPVVNDNSQLVGIVSISDIAREMRSGMDSM 129


>gi|76810344|ref|YP_334463.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia pseudomallei 1710b]
 gi|126455435|ref|YP_001067294.1| glucokinase [Burkholderia pseudomallei 1106a]
 gi|166998333|ref|ZP_02264193.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei PRL-20]
 gi|226193829|ref|ZP_03789431.1| glucokinase [Burkholderia pseudomallei Pakistan 9]
 gi|237813417|ref|YP_002897868.1| bifunctional protein glk [Burkholderia pseudomallei MSHR346]
 gi|242316599|ref|ZP_04815615.1| glucokinase [Burkholderia pseudomallei 1106b]
 gi|254261082|ref|ZP_04952136.1| glucokinase [Burkholderia pseudomallei 1710a]
 gi|119370097|sp|Q3JPP0|GLK_BURP1 RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|76579797|gb|ABA49272.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei 1710b]
 gi|126229077|gb|ABN92617.1| glucokinase [Burkholderia pseudomallei 1106a]
 gi|225934134|gb|EEH30119.1| glucokinase [Burkholderia pseudomallei Pakistan 9]
 gi|237502683|gb|ACQ95001.1| bifunctional protein glk [Burkholderia pseudomallei MSHR346]
 gi|242139838|gb|EES26240.1| glucokinase [Burkholderia pseudomallei 1106b]
 gi|243065403|gb|EES47589.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia mallei PRL-20]
 gi|254219771|gb|EET09155.1| glucokinase [Burkholderia pseudomallei 1710a]
          Length = 641

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|53720224|ref|YP_109210.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia pseudomallei K96243]
 gi|126438865|ref|YP_001060014.1| glucokinase [Burkholderia pseudomallei 668]
 gi|134280346|ref|ZP_01767057.1| glucokinase [Burkholderia pseudomallei 305]
 gi|81379255|sp|Q63RQ7|GLK_BURPS RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|52210638|emb|CAH36622.1| glucokinase [Burkholderia pseudomallei K96243]
 gi|126218358|gb|ABN81864.1| glucokinase [Burkholderia pseudomallei 668]
 gi|134248353|gb|EBA48436.1| glucokinase [Burkholderia pseudomallei 305]
          Length = 641

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|261213169|ref|ZP_05927452.1| transcriptional regulator RpiR family [Vibrio sp. RC341]
 gi|260837587|gb|EEX64281.1| transcriptional regulator RpiR family [Vibrio sp. RC341]
          Length = 282

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHNQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|242241910|ref|ZP_04796355.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis W23144]
 gi|242234688|gb|EES37000.1| glucose-6-phosphate isomerase [Staphylococcus epidermidis W23144]
          Length = 187

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+S+L    + Q+      +     R+   G G+SG + +  A  L   G  ++ V 
Sbjct: 16  LEELDSTLSQVDNTQYERFANDVIGAD-RIFTAGKGRSGFVSNSFAMRLNQLGKNAYVVG 74

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+  +S +   A+
Sbjct: 75  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSVGAKIVLLTTNAESPIGNLAE 129

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 130 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSIVLPLMDAFHISEKTMQENH 183


>gi|237507518|ref|ZP_04520233.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           MSHR346]
 gi|234999723|gb|EEP49147.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           MSHR346]
          Length = 465

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 250 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 301

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 302 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 360

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 361 RVVGIVTRADLSKA 374



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 332 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 391

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 392 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 451

Query: 336 LRFGI 340
           +  G+
Sbjct: 452 I-AGL 455


>gi|325982180|ref|YP_004294582.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
 gi|325531699|gb|ADZ26420.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
          Length = 149

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDI-FRNFHKDLN 281
               + +++    + +A  ++ +   G V V+D+        G++T+ D+       +L+
Sbjct: 7   CNREVIVIQRDETVQEAAKLMRQFHVGAVIVIDKPNGRAVPVGVVTDRDLIVEVMATELD 66

Query: 282 TL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +V D+M+ +   + E+T +  A++L+R+  I  L +VDD  + IGI+   D L+
Sbjct: 67  ETVITVGDIMVPDIFTVKENTEIHEAIELMRRKTIRRLPIVDDVGELIGILTLDDALQ 124



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLL 336
           +++ ++  +   VI  D  +  A +L+RQ ++  ++V+D        +G+V   DL+
Sbjct: 1   MTIGEICNREVIVIQRDETVQEAAKLMRQFHVGAVIVIDKPNGRAVPVGVVTDRDLI 57



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           VK    + +AI ++  K    + +VD+  +L GI+T  D  +   + L  L
Sbjct: 83  VKENTEIHEAIELMRRKTIRRLPIVDDVGELIGILTLDDALQWLSESLLDL 133


>gi|226312319|ref|YP_002772213.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
 gi|226095267|dbj|BAH43709.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
          Length = 288

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 38/197 (19%), Positives = 73/197 (37%), Gaps = 6/197 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +    ++ K    +  +L  +     A +   A    +   +  +  +   +    V  +
Sbjct: 78  LASEVTNPKQTIHQEINLDDDDVSAIAEKIFTANIETIRDTQQIINKD---ELMKIVSCL 134

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +    R+   G G S  I          TG P  +   A        ++T+  +++ +S 
Sbjct: 135 ENAS-RIEFYGSGGSAVIAQDAYHKFMRTGIPCLYHSDAHYQVMSASLLTKGAVVVGISH 193

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGS+ ++ A L  A+      I ITS  KS +   AD+ L                +S +
Sbjct: 194 SGSNKDILAALQVAKEAGAKTIGITSYGKSPLVRLADMCLYTTSRETVFRTEAL--SSRL 251

Query: 181 MQLAIGDALAIALLESR 197
            QL++ D L +A+   R
Sbjct: 252 AQLSLIDLLYVAVSLRR 268


>gi|222619917|gb|EEE56049.1| hypothetical protein OsJ_04848 [Oryza sativa Japonica Group]
          Length = 895

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 7/135 (5%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P   +       +           +     + +A   ++ KR     + D    L GI
Sbjct: 39  SKPASPVQAPSPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGI 98

Query: 267 ITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T  DI  R   + L  +  +V   M +NP  ++ ++    A+Q + +     L VV+  
Sbjct: 99  LTAEDISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHG 158

Query: 324 QKAIGIVHFLDLLRF 338
           +    ++  LD+ +F
Sbjct: 159 E----VIAMLDITKF 169



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 274 RNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            N    L   S+  ++ +N    V+     +  A + +R++ ++ ++V+      +GI+ 
Sbjct: 210 ENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKMREYRVNSVVVMT-GNMLLGILT 268

Query: 332 FLDLL 336
             DL+
Sbjct: 269 SKDLV 273



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 40/104 (38%), Gaps = 4/104 (3%)

Query: 185 IGDALAIALLESRNFSENDF---YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
            G A+A A+        NDF   +      +        S ++   +S+P+V    P+I 
Sbjct: 183 QGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIA 242

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           A   + E R   V VV  G  L GI+T  D+         +  V
Sbjct: 243 AAKKMREYRVNSV-VVMTGNMLLGILTSKDLVLRLVAQSLSPDV 285


>gi|218235447|ref|YP_002365515.1| CBS domain protein [Bacillus cereus B4264]
 gi|218163404|gb|ACK63396.1| CBS domain protein [Bacillus cereus B4264]
          Length = 139

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 67  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|289650624|ref|ZP_06481967.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. aesculi str. 2250]
          Length = 644

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|261212133|ref|ZP_05926419.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC341]
 gi|262402848|ref|ZP_06079409.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC586]
 gi|260838741|gb|EEX65392.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC341]
 gi|262351630|gb|EEZ00763.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. RC586]
          Length = 487

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTYHHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGASRAEVQEEMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|167825397|ref|ZP_02456868.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei 9]
 gi|167920090|ref|ZP_02507181.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei BCC215]
          Length = 600

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|163856395|ref|YP_001630693.1| inosine-5'-monophosphate dehydrogenase [Bordetella petrii DSM
           12804]
 gi|163260123|emb|CAP42424.1| inosine-5'-monophosphate dehydrogenase [Bordetella petrii]
          Length = 486

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIG-----IIHKNLSADEQAKEVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG+KL GI+T  D+     +D     + ++
Sbjct: 95  DPVTVTPDMKVRDAIALQRQHGISGLPVV-EGKKLVGIVTNRDLRF---EDRLDQPLRNI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V++  +  G+    D+++
Sbjct: 151 MTPQERLVTMQEGATLDEAQALMHKHRLERVLIVNNAFELRGLATVKDIVK 201


>gi|13620222|emb|CAC36398.1| hypothetical protein [Solanum lycopersicum]
          Length = 750

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 49/130 (37%), Gaps = 30/130 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------D 279
           V     + +A+  + + R  CV VVD    L+GI+T GD+ R+  K             D
Sbjct: 587 VSPSQTVKEALECMHDGRQSCVLVVDAEGYLEGILTYGDVKRSLFKNHGDSSNKDLSVTD 646

Query: 280 LNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ------ 324
            NT  V  +  K                DT L +A QL+    I  L VV          
Sbjct: 647 ANTCLVSSICTKGISYRGQDCGLLTCYPDTDLAIAKQLMEAKGIKQLPVVKRGGEFRRER 706

Query: 325 --KAIGIVHF 332
             + I ++H+
Sbjct: 707 KRRVIALLHY 716



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  L V   M  +   +     +  A++ +     S ++VVD      GI+ + D+ R
Sbjct: 571 LEDLKVSQAMSNDYLKVSPSQTVKEALECMHDGRQSCVLVVDAEGYLEGILTYGDVKR 628


>gi|254253250|ref|ZP_04946568.1| Helix-turn-helix protein RpiR [Burkholderia dolosa AUO158]
 gi|124895859|gb|EAY69739.1| Helix-turn-helix protein RpiR [Burkholderia dolosa AUO158]
          Length = 281

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +L        +     A+  +     R+   G G SG     +       G PS  
Sbjct: 99  RTIGALIEVRNSLSAGSVADAIALLSNAS-RIEFYGAGGSGIAAQDIQHKFFRLGVPSVA 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                       ++   D+++ +S +G + ++      A      ++AIT  + S +A  
Sbjct: 158 YSDPHTFSMSAALLGPQDVVVAISNTGRTRDIVDAARAALACGAKVVAIT-HSHSPLAKL 216

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      E+     +P TS +  LAIGD LA+ +  SR 
Sbjct: 217 ATVSLASNIAEETDVF--SPMTSRMSHLAIGDILAVGVALSRG 257


>gi|328958363|ref|YP_004375749.1| gluconate operon transcriptional regulator, RpiR family
           [Carnobacterium sp. 17-4]
 gi|328674687|gb|AEB30733.1| gluconate operon transcriptional regulator, RpiR family
           [Carnobacterium sp. 17-4]
          Length = 282

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 73/186 (39%), Gaps = 10/186 (5%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +++ +  A +   +  + L+  +  L  +   +   AV+ + A K  V   G+G S  I 
Sbjct: 91  EDNELLMAQKVFDSNIKSLNDTKKLLDEQ---ELIKAVQFLTAAKT-VGFFGVGGSSIIA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T   S +             +T +D  I++S SG + +   +    +    
Sbjct: 147 MDAYHKFLRTPLNSTYTQDTHIQMMQASRLTENDCAIIISHSGITKDTIQLAEIIKEKRA 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             I ITS + S +A  AD +L    E           TS I QL++ DAL ++++    F
Sbjct: 207 KAIIITSYSLSPLAKFADALLLSTAEETDYRSEAL--TSRITQLSLIDALFVSIM----F 260

Query: 200 SENDFY 205
              DF 
Sbjct: 261 KTGDFA 266


>gi|302384373|ref|YP_003820196.1| nucleotidyl transferase [Brevundimonas subvibrioides ATCC 15264]
 gi|302195001|gb|ADL02573.1| Nucleotidyl transferase [Brevundimonas subvibrioides ATCC 15264]
          Length = 356

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMI 290
           L+     L+DAI  +   R   + VVD  ++L G +++GDI R   + L     V  VM 
Sbjct: 11  LLPPDASLLDAIERMDAVRRKLIVVVDADRRLLGTVSDGDIRRGLMRRLEMQAPVSAVMN 70

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           ++P  +        AM  L +  +S+  ++D   + +G+
Sbjct: 71  RDPVAVRVAGPEAEAMVRLSERGVSLAPLLDGGGRVVGL 109


>gi|18312548|ref|NP_559215.1| hypothetical protein PAE1315 [Pyrobaculum aerophilum str. IM2]
 gi|18160014|gb|AAL63397.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 140

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-T 282
           +  ++       P+ +   I+ +K  G V VVD  +     GI+ E D+ + F   L+ +
Sbjct: 7   ARTNVVTCSPDTPIREVAEIMIKKNIGSVIVVDPAKPTGPIGIVGERDVVKAFAAGLDPS 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               ++M K    I  D  +  A+ L+R+ N+  L VV    +  G++   D++
Sbjct: 67  TPASEIMSKLLVTIDADAHVAEALLLMREANVRRL-VVTKGGELYGVIALKDIV 119



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIVHFLDLLRF 338
           + +  V   N      DT +    +++ + NI  ++VVD  +    IGIV   D+++ 
Sbjct: 1   MKISAVARTNVVTCSPDTPIREVAEIMIKKNIGSVIVVDPAKPTGPIGIVGERDVVKA 58


>gi|163847379|ref|YP_001635423.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222525225|ref|YP_002569696.1| CBS domain-containing protein [Chloroflexus sp. Y-400-fl]
 gi|163668668|gb|ABY35034.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222449104|gb|ACM53370.1| CBS domain containing protein [Chloroflexus sp. Y-400-fl]
          Length = 215

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 49/126 (38%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                   V     + DA+ ++  +      VV    +L GI++  D+            
Sbjct: 6   RMSHPPITVTPETSIHDAMHLMRTEHIRRAPVV-SHGRLVGIVSLKDLINASPSPATTLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ L+VE VM ++   +  DT +  A +++    I  L V+    + +GI+  
Sbjct: 65  VWELNYLLSKLTVERVMTRDVYTVTVDTPIEEAARIMADRRIGGLPVM-KGNELVGIITE 123

Query: 333 LDLLRF 338
            DL + 
Sbjct: 124 TDLFKI 129



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M   P  +  +T +  AM L+R  +I    VV    + +GIV   DL+  
Sbjct: 3   VGERMSHPPITVTPETSIHDAMHLMRTEHIRRAPVV-SHGRLVGIVSLKDLINA 55



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V +  P+ +A  I++++R G + V+ +G +L GIITE D+F+ F
Sbjct: 81  MTRDVYTVTVDTPIEEAARIMADRRIGGLPVM-KGNELVGIITETDLFKIF 130


>gi|330981134|gb|EGH79237.1| arabinose 5-phosphate isomerase [Pseudomonas syringae pv. aptata
          str. DSM 50252]
          Length = 70

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 4/71 (5%)

Query: 20 KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +  +Q A R+I  E   +  L   L G+    F  A E I A KGRVV+ G+GKSGHIG
Sbjct: 4  SSDLIQSAQRTIRLEIEAIQGLLERLDGD----FVRACEMILASKGRVVVVGMGKSGHIG 59

Query: 80 SKLASTLASTG 90
          +K+A+TLASTG
Sbjct: 60 NKIAATLASTG 70


>gi|308173460|ref|YP_003920165.1| oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|307606324|emb|CBI42695.1| putative oxidoreductase [Bacillus amyloliquefaciens DSM 7]
 gi|328553611|gb|AEB24103.1| oxidoreductase [Bacillus amyloliquefaciens TA208]
 gi|328911595|gb|AEB63191.1| putative oxidoreductase [Bacillus amyloliquefaciens LL3]
          Length = 147

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 4/100 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + +VDE  + L GI+T+ D+       K  N+  + D M +    
Sbjct: 21  VYEAAVKMKDADVGAIPIVDEDGETLVGIVTDRDLVLRGIASKRPNSQKITDAMTERVIS 80

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ED  +   + ++ +H +  + V    +K +GIV   DL
Sbjct: 81  AEEDASVEEVLHMMAEHQLRRIPVT-RDKKLVGIVTLGDL 119



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
             +  +M  N +       +  A   ++  ++  + +VD+  +  +GIV   DL+  GI
Sbjct: 2   TKINKLMTSNLQYCTVLDNVYEAAVKMKDADVGAIPIVDEDGETLVGIVTDRDLVLRGI 60


>gi|167912117|ref|ZP_02499208.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei 112]
          Length = 600

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|167816987|ref|ZP_02448667.1| glucokinase/transcriptional regulator, RpiR family, fusion
           [Burkholderia pseudomallei 91]
          Length = 597

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 398 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 453

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 454 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 513

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 514 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 570

Query: 191 IALLESR 197
           + +   R
Sbjct: 571 VGVAIRR 577


>gi|167747894|ref|ZP_02420021.1| hypothetical protein ANACAC_02623 [Anaerostipes caccae DSM 14662]
 gi|167652716|gb|EDR96845.1| hypothetical protein ANACAC_02623 [Anaerostipes caccae DSM 14662]
          Length = 484

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSASMDTVTEHRMAIAMARQGGIG-----IIHKNMTIAQQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +  EG KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFSLSPEHTIQDADDLMGKYRISGVPIT-EGTKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +N     E   L  A Q+L +     L +VD      G++   D+
Sbjct: 153 TSENLVTAQEGITLEEAKQILGKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|186475391|ref|YP_001856861.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia phymatum STM815]
 gi|184191850|gb|ACC69815.1| glucokinase [Burkholderia phymatum STM815]
          Length = 639

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVESAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLLMIDILA 592

Query: 191 IALLESR 197
           + +   R
Sbjct: 593 VGVAIRR 599


>gi|94263436|ref|ZP_01287249.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|94270277|ref|ZP_01291697.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93450869|gb|EAT01888.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
 gi|93456166|gb|EAT06305.1| conserved hypothetical protein [delta proteobacterium MLMS-1]
          Length = 643

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 3/110 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVE 286
               +     +  A   ++E + G + V D G+ + GI+T+ D+  +     L+    +E
Sbjct: 181 KPQTIAAEATVRQAAGRMAELQIGSLLVTDSGENIIGIVTDKDLRTKVVAAGLDYQTPLE 240

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +M    + I    +   AM  + +  I  L V +   + +G++   D++
Sbjct: 241 RIMAAPVQTIPAHAVCFDAMLKMMRRRIHHLAV-EKKGEIVGMITTHDIM 289


>gi|78776797|ref|YP_393112.1| nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251]
 gi|78497337|gb|ABB43877.1| Nucleotidyl transferase [Sulfurimonas denitrificans DSM 1251]
          Length = 348

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
               +   +K    + +A+ I+         +VDE  +L G +T+GDI R   K L+   
Sbjct: 1   MKRINNIKLKPTSTIKEALIIIDSGAMQIALIVDENDRLLGTLTDGDIRRGLLKGLDLNS 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           S+E V+ K P V          +++     +  + +VD+  K IGI    +L++
Sbjct: 61  SIESVIFKTPTVAKISDTKEEILKIALTKKLHQIPIVDEDGKIIGIQDIEELIK 114


>gi|325964243|ref|YP_004242149.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323470330|gb|ADX74015.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 143

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  ++    L DA  ++ +   G + +  +  KL G+IT+ DI        +D   
Sbjct: 8   MTTDAQCIRENQSLADAARMMLDLDCGSLPICGDDGKLHGMITDRDIVLKCVAAGRDPRD 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   ++    P  I  D  +  A++++  H +  L V+    K +GI+   D+ R
Sbjct: 68  MMARELASGKPYWIDADANVDAAIEMMETHQVRRLPVI-ADHKLVGIISQGDIAR 121



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M  + + I E+  L  A +++   +   L +  D  K  G++   D++
Sbjct: 4   VREFMTTDAQCIRENQSLADAARMMLDLDCGSLPICGDDGKLHGMITDRDIV 55


>gi|296269625|ref|YP_003652257.1| putative CBS domain-containing signal transduction protein
           [Thermobispora bispora DSM 43833]
 gi|296092412|gb|ADG88364.1| putative signal transduction protein with CBS domains
           [Thermobispora bispora DSM 43833]
          Length = 218

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 48/121 (39%), Gaps = 16/121 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---------------RNFH 277
           V +       +  +     G V VVD  ++  G+++E D+                R   
Sbjct: 16  VTMDATFTQLVETMRRYGVGAVTVVDADRRPIGVVSEDDLLLKEIEAGGRPFGHLSRAER 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           + +   +  ++M      +   T +  A +L+ ++ I  L V++    + +G VH  DLL
Sbjct: 76  RKVTGTTAAELMTTPAITVTVGTPIRDAARLMHRNRIKQLPVIEPATGRIVGTVHQGDLL 135

Query: 337 R 337
           R
Sbjct: 136 R 136



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +V DVM      +  D   T  ++ +R++ +  + VVD  ++ IG+V   DLL
Sbjct: 2   AATVRDVMGTVAIAVTMDATFTQLVETMRRYGVGAVTVVDADRRPIGVVSEDDLL 56



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 5/84 (5%)

Query: 208 HPGGKLGTLFVCASD----VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQK 262
            P G L                       V +G P+ DA  ++   R   + V++    +
Sbjct: 65  RPFGHLSRAERRKVTGTTAAELMTTPAITVTVGTPIRDAARLMHRNRIKQLPVIEPATGR 124

Query: 263 LKGIITEGDIFRNFHKDLNTLSVE 286
           + G + +GD+ R F +    +  +
Sbjct: 125 IVGTVHQGDLLRVFARPAEEIKAD 148


>gi|258619964|ref|ZP_05715004.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM573]
 gi|258627196|ref|ZP_05721984.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM603]
 gi|262172163|ref|ZP_06039841.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus MB-451]
 gi|258580498|gb|EEW05459.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM603]
 gi|258587697|gb|EEW12406.1| inositol-5-monophosphate dehydrogenase [Vibrio mimicus VM573]
 gi|261893239|gb|EEY39225.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus MB-451]
          Length = 487

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTYHHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGASRAEVQEEMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|226324659|ref|ZP_03800177.1| hypothetical protein COPCOM_02444 [Coprococcus comes ATCC 27758]
 gi|225207107|gb|EEG89461.1| hypothetical protein COPCOM_02444 [Coprococcus comes ATCC 27758]
          Length = 484

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPEHTLADANELMAKFRISGVPIT-EGRKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLVTAQEGITLEEAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|167570890|ref|ZP_02363764.1| glucokinase [Burkholderia oklahomensis C6786]
          Length = 639

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|119872726|ref|YP_930733.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674134|gb|ABL88390.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 127

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
             I  P+  AI  +     G V V+D      GI+TE DI R   ++++    +E V  K
Sbjct: 14  CYIDEPIECAIAKMYAANVGSVVVLDRSGNPVGIVTERDIVRFLAQEIDLKTPLEKVARK 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +  +  A   + +HNI  + VVD   K IG++   D+LR 
Sbjct: 74  TLITASVEDSIISAAVKMIEHNIRHMPVVD-QGKIIGVISIRDVLRA 119


>gi|157959881|ref|YP_001499915.1| nucleotidyl transferase [Shewanella pealeana ATCC 700345]
 gi|157844881|gb|ABV85380.1| Nucleotidyl transferase [Shewanella pealeana ATCC 700345]
          Length = 351

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 51/109 (46%), Gaps = 2/109 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              L+K    ++DA+ ++  +      VV+  QKL G+IT+GDI R    +L+    V +
Sbjct: 6   KNILIKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDIRRGILNNLSLDTPVTE 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M  +P      +      QL+   +I  + ++ +  K +G+     LL
Sbjct: 66  IMNCSPITAEMSSTKEQLTQLMESKSILAIPLI-ENGKVVGLETLQRLL 113



 Score = 35.6 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           I  +  +  A+ ++    + V +VV+  QK +G++   D+ R GI+
Sbjct: 10  IKPEATILDALGVIDNEALQVALVVNSEQKLLGVITDGDI-RRGIL 54


>gi|14520462|ref|NP_125937.1| inosine-5'-monophosphate dehydrogenase related [Pyrococcus abyssi
           GE5]
 gi|5457677|emb|CAB49168.1| Small intracellular module of unknown function,containing CBS
           domains [Pyrococcus abyssi GE5]
          Length = 179

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK 291
               +     ILS+ + G   V+D+ + L GI+TE DI        KD   + VE++M K
Sbjct: 20  PSDSVHRVARILSKNKVGSAVVMDKDEVL-GIVTERDILDKVVAKGKDPKEVKVEEIMTK 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           NP  I  D  +  A+ L+ +  +  ++V     K IG V   DLL  
Sbjct: 79  NPVKIEYDYDVQDAIDLMTEKGVRRILVT-KFGKPIGFVTAADLLSA 124


>gi|292670519|ref|ZP_06603945.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
 gi|292647929|gb|EFF65901.1| conserved hypothetical protein [Selenomonas noxia ATCC 43541]
          Length = 281

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 41/204 (20%), Positives = 84/204 (41%), Gaps = 11/204 (5%)

Query: 2   HFYFSHFKSVTRK---GHSLMKNSTVQCAL-----RSIIAEKRGLSSLESSLQGELSFQF 53
           H   +  K +  K   G  ++ ++ + CA      R+I A K+    L  +L       F
Sbjct: 62  HLKINMAKEMATKPSDGAPIVGSNELDCARMDVSLRNIFASKQ--EELRQTLAEIDPAVF 119

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
              VE+I+A +  +    +G +  +    A      G  +      E     +   T DD
Sbjct: 120 RSVVERIRAAR-FIFCAAMGNTIPVAMDAAYKFNELGLTAISAPVWENMLAMMHTATPDD 178

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++ +S SG + +L  I+  AR     ++ +T++  S +A  +D VL    +        
Sbjct: 179 VLLAISASGETKDLMRIVSAARGRGAYIVLVTNQVHSSIARVSDRVLHAVSQERMFFRTF 238

Query: 174 APTTSAIMQLAIGDALAIALLESR 197
           + +++ +   A+ +A+   LL  +
Sbjct: 239 SFSSTRLSMTAVIEAVYYMLLSVK 262


>gi|260776624|ref|ZP_05885519.1| inosine-5'-monophosphate dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260607847|gb|EEX34112.1| inosine-5'-monophosphate dehydrogenase [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 487

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEMVHQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV +  +L GIIT  D+   F  DL+   VE VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTDNNELVGIITGRDVR--FVTDLSK-KVEVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|167563742|ref|ZP_02356658.1| glucokinase [Burkholderia oklahomensis EO147]
          Length = 639

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 65/187 (34%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVEQAIDILNNAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L                 S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALETDHIEMRES--QLSMISRILHLVMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|262395110|ref|YP_003286964.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. Ex25]
 gi|262338704|gb|ACY52499.1| inosine-5'-monophosphate dehydrogenase [Vibrio sp. Ex25]
          Length = 488

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + ++      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRKVKKFEAGMV---TDA 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVNPDATIADVVALTEKHGFAGFPVVTESNELVGIITGRDVR--FVTDLSK-KVSSVMT 154

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              K   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKEKLAAVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|91773328|ref|YP_566020.1| Cl- channel, voltage gated [Methanococcoides burtonii DSM 6242]
 gi|91712343|gb|ABE52270.1| Voltage-gated ClC-type chloride channel [Methanococcoides burtonii
           DSM 6242]
          Length = 577

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 63/163 (38%), Gaps = 9/163 (5%)

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
           +++I      +++   +L+ R F+     +           +   D M +   +  +   
Sbjct: 405 SNSISNSLHEESMFTEMLKRRGFT-----IRRGKEINIMEAMFVRDNMRTN--VHTISDD 457

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
               D + ++   R     V+D  +KL GI+T  D+    +     + +  +   N    
Sbjct: 458 DTAKDLLDLMQSSRHAGFPVLDGNKKLCGIVTLEDMREKVNYGELDIRISQIATHNVISA 517

Query: 297 LEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLR 337
             D  L V ++     ++  L VV  DD +  +GI+   D+++
Sbjct: 518 YPDETLDVVLKRFAMRDVGRLPVVSRDDDKSLLGIITRSDIVK 560


>gi|327462076|gb|EGF08405.1| CBS domain protein [Streptococcus sanguinis SK1057]
 gi|327470488|gb|EGF15944.1| CBS domain protein [Streptococcus sanguinis SK330]
 gi|328946590|gb|EGG40728.1| CBS domain protein [Streptococcus sanguinis SK1087]
          Length = 218

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPNTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-LYGVITDRDIFKA 129



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  +T +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPNTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  ++L G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQLYGVITDRDIFKAF 130


>gi|313610555|gb|EFR85676.1| SIS domain-containing protein [Listeria monocytogenes FSL F2-208]
          Length = 92

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 23/95 (24%), Positives = 41/95 (43%), Gaps = 3/95 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           + K + +    ++   E   +S L      E        VE I    G++V+ G G SG 
Sbjct: 1   MDKQAILDNIHQTWQEEANAISRLPEVTSEE---ALVKTVETIAECTGKIVVAGCGTSGV 57

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
              KL  +      P+ F+  ++A HG LG++ ++
Sbjct: 58  AAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKE 92


>gi|238026926|ref|YP_002911157.1| inosine 5'-monophosphate dehydrogenase [Burkholderia glumae BGR1]
 gi|237876120|gb|ACR28453.1| Inosine-5'-monophosphate dehydrogenase [Burkholderia glumae BGR1]
          Length = 486

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 62/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+ + V+ +M   
Sbjct: 99  VPPTMKVRDVIALSRQHGISGFPVV-EGAQLVGIVTNRDLR--FESRLDDV-VQSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLADAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|172059892|ref|YP_001807544.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia ambifaria MC40-6]
 gi|171992409|gb|ACB63328.1| glucokinase [Burkholderia ambifaria MC40-6]
          Length = 642

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDVLA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|154706065|ref|YP_001424767.1| CBS domain containing protein [Coxiella burnetii Dugway 5J108-111]
 gi|154355351|gb|ABS76813.1| CBS domain containing protein [Coxiella burnetii Dugway 5J108-111]
          Length = 144

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNT 282
                  +     + +A   + +   G + V  E  KL G +T+ DI  +     KD   
Sbjct: 7   MCKKPAYLPPTSSVKEAAKKMKQLDCGFIPV-GENDKLIGTVTDRDIVLHAAAQGKDPGN 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++ DVM +  +   E+  L  A + + +  I  L+V++D ++  GI+   D+ R
Sbjct: 66  TALRDVMSEGVEYCYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIAR 120



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V++VM K P  +   + +  A + ++Q +   + V  +  K IG V   D++
Sbjct: 1   MQVKEVMCKKPAYLPPTSSVKEAAKKMKQLDCGFIPV-GENDKLIGTVTDRDIV 53



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDV 288
                 L +A   +  K+   + V+++ +++ GI++ GDI  R+   DL   +VE +
Sbjct: 79  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIARRSQDDDLCAQAVEGI 135


>gi|120553209|ref|YP_957560.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
 gi|120323058|gb|ABM17373.1| cyclic nucleotide-binding protein [Marinobacter aquaeolei VT8]
          Length = 625

 Score = 79.2 bits (194), Expect = 8e-13,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 58/139 (41%), Gaps = 8/139 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--- 261
            V         +    + ++              L +A  I+++     + ++DE     
Sbjct: 137 AVSRRHKSNELMSAKVTRLIAREPVSA--PTTVRLQEAARIMTDNGVSALLLMDESGDSP 194

Query: 262 KLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +LKGIIT+ D+  R     L +   + ++M +    I   + +  AM  +  +N+  L V
Sbjct: 195 RLKGIITDRDLRTRAVTNALPSETPISEIMSEGLITISARSYIFEAMLTMLHNNVHHLPV 254

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           ++D +   G++   D++++
Sbjct: 255 MEDHE-VRGVIALSDIVKY 272


>gi|317472504|ref|ZP_07931825.1| inosine-5'-monophosphate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
 gi|316900018|gb|EFV22011.1| inosine-5'-monophosphate dehydrogenase [Anaerostipes sp. 3_2_56FAA]
          Length = 484

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 59/167 (35%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPLMSASMDTVTEHRMAIAMARQGGIG-----IIHKNMTIAQQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++ + R   V +  EG KL GIIT  D+   F  D +    E +
Sbjct: 96  DPFSLSPEHTIQDADDLMGKYRISGVPIT-EGTKLVGIITNRDLK--FETDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +N     E   L  A Q+L +     L +VD      G++   D+
Sbjct: 153 TSENLVTAQEGITLEEAKQILGKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|305663816|ref|YP_003860104.1| 3-hexulose-6-phosphate isomerase [Ignisphaera aggregans DSM 17230]
 gi|304378385|gb|ADM28224.1| 3-hexulose-6-phosphate isomerase [Ignisphaera aggregans DSM 17230]
          Length = 198

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 71/189 (37%), Gaps = 20/189 (10%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +S+  + ++      F   +E       R+++ G G+SG +G   A  L   G   +
Sbjct: 10  SNFISNALAVIKSPQVENFIKLLEDAYKNDRRILVIGAGRSGLVGRAFAMRLKHLGFDVY 69

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +     S      + +DD++I +S SG +  +      A+     +IAITS   S +A 
Sbjct: 70  VLGDTIVSP-----VRKDDIVIAISGSGRTALIVTAAEAAKTVGAKVIAITSFIDSPLAR 124

Query: 155 HADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNF 199
            AD+V+ +P   +                  LAP  +          DA+   L+     
Sbjct: 125 LADVVVEIPGRTKISHVEDYFARQVLGLHEPLAPLGTLFEDCAAVFLDAVIAELMHRFGK 184

Query: 200 SENDFYVLH 208
           +E D    H
Sbjct: 185 TEEDLRQEH 193


>gi|295675824|ref|YP_003604348.1| glucokinase [Burkholderia sp. CCGE1002]
 gi|295435667|gb|ADG14837.1| glucokinase [Burkholderia sp. CCGE1002]
          Length = 638

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A++ +   + R+   
Sbjct: 420 PVSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVERAIDLLNGAR-RIEFY 475

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 476 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 535

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 536 LDVAMQAGAQVIAITSS-NTPLAKRATVALET--DHIEIRESQLSMISRILHLVMIDILA 592

Query: 191 IALLESR 197
           + +   R
Sbjct: 593 VGVAIRR 599


>gi|269929353|ref|YP_003321674.1| CBS domain containing membrane protein [Sphaerobacter thermophilus
           DSM 20745]
 gi|269788710|gb|ACZ40852.1| CBS domain containing membrane protein [Sphaerobacter thermophilus
           DSM 20745]
          Length = 465

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 42/126 (33%), Gaps = 25/126 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------ 274
           V+    L      + E + GC  VVD+   L GIITE D  R                  
Sbjct: 326 VREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLRGSIPFWIYEASEILSRAI 385

Query: 275 ------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                 +  +    L+   VM +       +  +      +R+H I  + VV      +G
Sbjct: 386 PAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVV-QDGVPVG 444

Query: 329 IVHFLD 334
           IV   D
Sbjct: 445 IVTRRD 450



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + + D++      + ED  L    + + +H I    VVD     +GI+   D LR
Sbjct: 312 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQNGHLVGIITESDFLR 367


>gi|206967775|ref|ZP_03228731.1| CBS domain protein [Bacillus cereus AH1134]
 gi|206736695|gb|EDZ53842.1| CBS domain protein [Bacillus cereus AH1134]
          Length = 139

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ QH I  L VVD   + IG++   DL
Sbjct: 67  KITNVMTTNIISVSPNDSIEKATELMAQHQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|115350879|ref|YP_772718.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia ambifaria AMMD]
 gi|115280867|gb|ABI86384.1| glucokinase [Burkholderia ambifaria AMMD]
          Length = 642

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDVLA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|329766203|ref|ZP_08257761.1| signal-transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137262|gb|EGG41540.1| signal-transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 145

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 4/104 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPK 294
             + DA  ++ EK  GC+ V  + +   GI+TE D  +     + L T  +E+VM     
Sbjct: 21  TSIKDAAKLMDEKNVGCIIVT-KNKLPIGILTERDFVKRIAAKEKLLTSPIEEVMSSPII 79

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A Q+++  NI  L V     + IGIV   DL++ 
Sbjct: 80  EIDPNETVWEAAQIMKTKNIHKLPV-KKDNQIIGIVTTTDLVKI 122



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVMI +   +   T +  A +L+ + N+  ++V    +  IGI+   D ++
Sbjct: 6   VKDVMISDLASLDYSTSIKDAAKLMDEKNVGCIIVT-KNKLPIGILTERDFVK 57


>gi|258516448|ref|YP_003192670.1| CBS domain-containing protein [Desulfotomaculum acetoxidans DSM
           771]
 gi|257780153|gb|ACV64047.1| CBS domain-containing protein [Desulfotomaculum acetoxidans DSM
           771]
          Length = 144

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 45/113 (39%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
              ++  +     + +A  ++S+   G + VV E  +  G++T+ DI         +  T
Sbjct: 9   MSKNVATITPQQTVAEAAQLMSQHNIGSLPVV-ENGQCVGMLTDRDITLRAAAKGANAAT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V  VM K          +  A +L+    I  L VV +  +  GIV   D+
Sbjct: 68  TKVGAVMTKEVITAAPQMDVNEASKLMADKQIRRLPVV-ENNQVTGIVAIGDI 119



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             S++++M KN   I     +  A QL+ QHNI  L VV +  + +G++   D+ 
Sbjct: 2   AQSLQEIMSKNVATITPQQTVAEAAQLMSQHNIGSLPVV-ENGQCVGMLTDRDIT 55


>gi|224369553|ref|YP_002603717.1| AcuB1 [Desulfobacterium autotrophicum HRM2]
 gi|223692270|gb|ACN15553.1| AcuB1 [Desulfobacterium autotrophicum HRM2]
          Length = 228

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 15/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              ++  V   C L  AI+ +   +   + V+ +   LKG++T+ D+ R    D      
Sbjct: 7   MTKNVITVDTDCTLERAISFMKSYKIRMMPVL-KNGVLKGVVTDRDLKRASASDAVKTTH 65

Query: 280 --------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   L  + +  +M K+P  +  +  +    +LL ++ IS   VVDD    +G++ 
Sbjct: 66  VDRATLASLANMKISTIMTKDPIRVPYNYSIDETAELLLENKISGAPVVDDMDNLVGVIT 125

Query: 332 FLDLLRF 338
             ++ + 
Sbjct: 126 QTNVYKA 132



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+  M KN   +  D  L  A+  ++ + I ++ V+       G+V   DL R 
Sbjct: 3   VKHWMTKNVITVDTDCTLERAISFMKSYKIRMMPVL-KNGVLKGVVTDRDLKRA 55


>gi|254518332|ref|ZP_05130388.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
 gi|226912081|gb|EEH97282.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
          Length = 284

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 1/124 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SLE +L  ++ +     +  I     R+  TG+G SG I           G       
Sbjct: 106 VNSLEETL-KKIDYSMIEEISDILVKAKRISFTGVGHSGIIAEDAYYKFMKIGLICNCYR 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        ++   D++ ++S SG+++E+      AR  ++ +I+IT    S +A  +D
Sbjct: 165 DSHTLVMMASLMKEGDVLFIISNSGNTEEINIAAEIARENNVKVISITENLLSKLARVSD 224

Query: 158 IVLT 161
            VL 
Sbjct: 225 YVLN 228


>gi|288869601|ref|ZP_05975178.2| 6-phospho 3-hexuloisomerase [Methanobrevibacter smithii DSM 2374]
 gi|288860545|gb|EFC92843.1| 6-phospho 3-hexuloisomerase [Methanobrevibacter smithii DSM 2374]
          Length = 196

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 44/195 (22%), Positives = 70/195 (35%), Gaps = 25/195 (12%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI A    +   E  L  +   +F    + I   K  V +TG G+SG      A  L   
Sbjct: 7   SIKAILDNIICAEEFLDEDAINEFE---DIIMNSKN-VFVTGAGRSGLAAKAFAMRLMHL 62

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  S+ V    +       I  DD II +S SG ++ + +    A+     ++A+TS  +
Sbjct: 63  GISSYVVGETISP-----AIYDDDCIIAISGSGETNTIVSAARIAKNRGSKVLAVTSYPE 117

Query: 150 SVVACHADIVLTLP----------------KEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           S +   AD  L +                             T   +  L   DA+   L
Sbjct: 118 STLGQLADGHLLVKGRTKKEVDDQNYMKRQIYGNYTSLTPLGTAFELTTLVFLDAIVSEL 177

Query: 194 LESRNFSENDFYVLH 208
           +E  + +E+D    H
Sbjct: 178 MEKMHQTESDLKSRH 192


>gi|221635717|ref|YP_002523593.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
 gi|221158173|gb|ACM07291.1| UspA domain protein, putative [Thermomicrobium roseum DSM 5159]
          Length = 462

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 53/160 (33%), Gaps = 31/160 (19%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +  P     TL                V     L     ++ +++ G V VVD   +L 
Sbjct: 293 ALEEPATANETLRARDIM----TPDPVTVGPDATLEQVARLMLDRQIGAVPVVDADGRLL 348

Query: 265 GIITEGDIF--------------------------RNFHKDLNTLSVEDVMIKNPKVILE 298
           G+I E D                               + +  T+   DV       + E
Sbjct: 349 GLIREEDFLAQEKPIPFAAFRAPQLFGHWLNAEGIERIYAEARTMKAGDVAQAPAVTVTE 408

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           DT L+   QL+ + ++  + VV    K +GIV   D+L+ 
Sbjct: 409 DTPLSRIAQLMVERDVRHIPVV-RDGKLVGIVTRHDVLKA 447



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +      V    PL     ++ E+    + VV    KL GI+T  D+ +   +  +T
Sbjct: 399 AQAPAVTVTEDTPLSRIAQLMVERDVRHIPVV-RDGKLVGIVTRHDVLKAVARQRST 454


>gi|199597702|ref|ZP_03211129.1| transcription regulator [Lactobacillus rhamnosus HN001]
 gi|199591318|gb|EDY99397.1| transcription regulator [Lactobacillus rhamnosus HN001]
          Length = 277

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 81/201 (40%), Gaps = 9/201 (4%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T  G     ++++  A +++      +++LE +L      Q   +V  +     +V + G
Sbjct: 78  TTNGDVETNDNSLASARKTV---NANIAALEGTLSFLTQNQIDHSVNLLLDA-NKVALFG 133

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G S  I      T           +           +T  D+ IV+S +G+  ++ A++
Sbjct: 134 LGSSNVIAKAAYHTFLRLPLTLIADNDYHMQLMSANKLTEHDVAIVISHTGNDTDILALV 193

Query: 132 YYARRFSIPLIAITSENKSVVACH-ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
                  +P+IA+TS   S +A   +D+  ++ ++       L   TS   QLAI D L 
Sbjct: 194 DLLSAHQVPIIAVTSYATSPLAKRVSDVFFSISEDTRYRSDALISMTS---QLAIFDVLY 250

Query: 191 IALLESRNF-SENDFYVLHPG 210
             L+      SE    ++H  
Sbjct: 251 TELVRRMGLQSEKTIALVHQA 271


>gi|170703031|ref|ZP_02893859.1| glucokinase [Burkholderia ambifaria IOP40-10]
 gi|170132055|gb|EDT00555.1| glucokinase [Burkholderia ambifaria IOP40-10]
          Length = 642

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDVLA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|330874769|gb|EGH08918.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. morsprunorum str. M302280PT]
          Length = 644

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ +A+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPDMPMRNAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V++ M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVKNTMSPSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   D  +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPDMPMRNAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|302875709|ref|YP_003844342.1| transcriptional regulator, RpiR family [Clostridium cellulovorans
           743B]
 gi|307689141|ref|ZP_07631587.1| transcriptional regulator, RpiR family protein [Clostridium
           cellulovorans 743B]
 gi|302578566|gb|ADL52578.1| transcriptional regulator, RpiR family [Clostridium cellulovorans
           743B]
          Length = 252

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 75/179 (41%), Gaps = 7/179 (3%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           +S FK++ +      K +  +  L + I E      LE  + G+L    + A + I   +
Sbjct: 59  YSDFKTMLKLYLKEYKRNDSKLMLSTGILE----DFLERVVNGDLDDAMNKAAKLIHEQE 114

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             V+  GIG SGH     A  L+S G  + ++          G I ++ + I +S SG S
Sbjct: 115 N-VLFIGIGNSGHSSGYGARYLSSLGKFALYIDDPYYPLT--GDIIKNSVTIAISVSGES 171

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           D +  +    +     +I++T+   S ++  AD+ ++   + ES             Q+
Sbjct: 172 DSILRLTNIFKERGSKIISVTNRKSSPLSKMADVNISYYIQQESFADNGLEYRDITSQV 230


>gi|220934210|ref|YP_002513109.1| inosine-5'-monophosphate dehydrogenase [Thioalkalivibrio sp.
           HL-EbGR7]
 gi|219995520|gb|ACL72122.1| inosine-5'-monophosphate dehydrogenase [Thioalkalivibrio sp.
           HL-EbGR7]
          Length = 486

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 70/204 (34%), Gaps = 18/204 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++  H+ ++   + L            P  SA M       LAIA+ +    
Sbjct: 7   ALTFDDVLLLPAHSTVLPKDVDLTTRLTRGITLNIPLLSAAMDTVTEGRLAIAMAQEGGI 66

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V             V  G  + + + I        V 
Sbjct: 67  G-----IIHKNMSIEAQAQQVRLVKKYESGVISDPVTVTPGTSIREVLAITRAHNISGVP 121

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHN 313
           VVD G  L GI+T  D+      D     V ++M        + E         LL +H 
Sbjct: 122 VVD-GVDLVGIVTSRDLRFETRMD---APVSEIMTPKERLVTVREGAEKEEVQHLLHKHR 177

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  ++V++D     G++   D+ +
Sbjct: 178 IEKVLVINDKFHLRGMITVKDIQK 201


>gi|182679391|ref|YP_001833537.1| CBS domain-containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
 gi|182635274|gb|ACB96048.1| CBS domain containing protein [Beijerinckia indica subsp. indica
           ATCC 9039]
          Length = 145

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + +      + +A  ++ E   G + V  E  +L G+IT+ DI  R      +   
Sbjct: 7   MSKEVRIASPAQSICEAAKMMKEIDAGFLPV-GENDRLVGMITDRDIAVRAVAAGRSPDT 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V D+M K      ED  +  A   + +  I  + V++  +  +GI+   D+ R G
Sbjct: 66  PVRDIMSKEVLYCFEDEEIGAAAHKMSEMQIRRMPVLNRDKHLVGIISLGDIARAG 121


>gi|17987023|ref|NP_539657.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. 16M]
 gi|17982676|gb|AAL51921.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. 16M]
          Length = 157

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 58/135 (42%), Gaps = 5/135 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                   +    ++ +     +V      L  A+ +L++ + G + V DE   ++GI++
Sbjct: 7   AKPWRDFGMTVRSILETKGRDVVVIASADTLSQAVAMLNKHKIGALVVCDEAGHIEGILS 66

Query: 269 EGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           E D+ R          + SV +VM    +V  E   +   M+++ +     + V ++  K
Sbjct: 67  ECDVVRALAAQESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGK 125

Query: 326 AIGIVHFLDLLRFGI 340
            +GI+   D+++  I
Sbjct: 126 LVGIISIGDVVKRRI 140



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +  +  S        + +      +   + I++  RF  + V +EG KL GII+ GD+ 
Sbjct: 78  ESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIGDVV 136

Query: 274 RNFHKDLNTLSVEDV 288
           +   +D+     ED+
Sbjct: 137 KRRIEDV-EREAEDI 150


>gi|18313291|ref|NP_559958.1| hypothetical protein PAE2364 [Pyrobaculum aerophilum str. IM2]
 gi|18160814|gb|AAL64140.1| conserved protein with 4 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 282

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 51/105 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +   P+ + I++     FG + +VDE  +L GI TE D+ +   +      V DVM +  
Sbjct: 95  RPETPVAEVISLFLRHNFGSMPIVDEAGRLVGIFTEWDVLKLASQLDFPHRVRDVMTRII 154

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+   + +   ++ +  +      +VD+  K + ++H  D+L++
Sbjct: 155 YVLTPYSTVMDVLEGITIYKFRRYPIVDENGKVVAMLHAKDVLKY 199



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                +  +  ++  V     +++A+ I+       + ++  G KL GIIT  DI    +
Sbjct: 4   FNRPVIEFATKNVVTVGEKEKVLNAMKIMVNLDIRRLPII-RGDKLVGIITMLDILDAIY 62

Query: 278 KDLNTLS-------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
             ++  +             + ++  ++      +T +   + L  +HN   + +VD+  
Sbjct: 63  SWISDKTTEGSLYSDIYMKNIIEIGTRSVISARPETPVAEVISLFLRHNFGSMPIVDEAG 122

Query: 325 KAIGIVHFLDLLRF 338
           + +GI    D+L+ 
Sbjct: 123 RLVGIFTEWDVLKL 136



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           DL    V +   KN   + E   +  AM+++   +I  L ++    K +GI+  LD+L  
Sbjct: 2   DLFNRPVIEFATKNVVTVGEKEKVLNAMKIMVNLDIRRLPII-RGDKLVGIITMLDILDA 60



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/125 (15%), Positives = 49/125 (39%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               I ++     ++D +  ++  +F    +VDE  K+  ++   D+ + F  D     +
Sbjct: 150 MTRIIYVLTPYSTVMDVLEGITIYKFRRYPIVDENGKVVAMLHAKDVLKYFADDETIEKI 209

Query: 286 EDVMI------------KNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVH 331
           +                K+P      D  +   ++ + ++++  + VV++     IG+V 
Sbjct: 210 KQGAGEEVVNNYVINIAKSPIFLAKPDDSVIDVIKKMLEYDVGGVPVVNEEGTAVIGMVT 269

Query: 332 FLDLL 336
              L+
Sbjct: 270 EKTLM 274


>gi|330891298|gb|EGH23959.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. mori str. 301020]
          Length = 644

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|308273061|emb|CBX29665.1| hypothetical protein N47_J06460 [uncultured Desulfobacterium sp.]
          Length = 432

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 45/122 (36%), Gaps = 2/122 (1%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G               +  V+    +     IL EK    + VV + +KL G+I+  D 
Sbjct: 302 GGNQQASVQISDLMSFPVFTVEPDTSMEKVAAILKEKGCTGLPVV-KDEKLVGVISRRDF 360

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +          V+  M  N   I        A +L+ +H+I  L VV +  + IGI+  
Sbjct: 361 IKIKRTSQLQSPVKAFMSTNTTTIAPGKSPVQAAKLMAKHDIGRLPVV-ENGRIIGIITR 419

Query: 333 LD 334
            D
Sbjct: 420 SD 421



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++ + D+M      +  DT +     +L++   + L VV   +K +G++   D ++  
Sbjct: 308 SVQISDLMSFPVFTVEPDTSMEKVAAILKEKGCTGLPVV-KDEKLVGVISRRDFIKIK 364


>gi|258620553|ref|ZP_05715590.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258625875|ref|ZP_05720750.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258581839|gb|EEW06713.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258587068|gb|EEW11780.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 282

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 72/178 (40%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+ +   +F  A+  I+    RV I G+G S   G  LA  
Sbjct: 98  IAQKLVQTKTDAMFHTTNALRFD---EFSEAINWIQQAV-RVQIIGLGGSALTGKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLNSQDVLIAISFSGEKREILIAAEAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + I L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADESQHRSSAIASRTAQNVLTDLIFITLAQQRETSARQ 269


>gi|34496758|ref|NP_900973.1| inosine 5'-monophosphate dehydrogenase [Chromobacterium violaceum
           ATCC 12472]
 gi|34102613|gb|AAQ58978.1| inosine-5'-monophosphate dehydrogenase [Chromobacterium violaceum
           ATCC 12472]
          Length = 487

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 65/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +       S V         
Sbjct: 40  NLPLVSAAMDTVTEARLAIAMAQEGGIG-----IVHKNMSVEKQAAEVSKVKRHESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D + +  + +   + V+ E  K+ GI+T  D+   F   L+  +V  +
Sbjct: 95  DPITIAPDMLVRDLVLLTRQYKISGLPVI-EAGKVVGIVTNRDLR--FETRLDQ-TVGSI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   +  A +L+  H +  ++V++D  +  G++   D+++
Sbjct: 151 MTPRERLITVKEGASIDEARELMHTHRLERVLVINDAWELKGLITVKDIIK 201


>gi|320326413|gb|EFW82466.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. glycinea str. B076]
 gi|320330626|gb|EFW86604.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. glycinea str. race 4]
          Length = 644

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|289624799|ref|ZP_06457753.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. aesculi str. NCPPB3681]
 gi|330871171|gb|EGH05880.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. aesculi str. 0893_23]
 gi|330985866|gb|EGH83969.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. lachrymans str. M301315]
          Length = 644

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|257483041|ref|ZP_05637082.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
 gi|331011723|gb|EGH91779.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. tabaci ATCC 11528]
          Length = 644

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 232


>gi|229159799|ref|ZP_04287806.1| CBS domain protein [Bacillus cereus R309803]
 gi|228623538|gb|EEK80357.1| CBS domain protein [Bacillus cereus R309803]
          Length = 139

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDAIEKATELMAQYQIRRLPVV-ENGQLVGMLALGDL 117



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V + M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVREFMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|224000862|ref|XP_002290103.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
           CCMP1335]
 gi|220973525|gb|EED91855.1| hypothetical protein THAPSDRAFT_268840 [Thalassiosira pseudonana
           CCMP1335]
          Length = 192

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 58/153 (37%), Gaps = 8/153 (5%)

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
           A +    +  +   F      G   T     S       +   V    P+ +A+   +  
Sbjct: 16  AASFAAVQQITLRGFAQTVKEGLTATDAWNKSCYSEIDYT---VSEDLPVYEAVQKFAAY 72

Query: 250 RFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVMIK--NPKVILEDTLLTV 304
             GC+   D+  K+ G+++E D         K    +S++++  K  N      +  ++ 
Sbjct: 73  NIGCLVTTDKDGKISGVVSERDYVCKVALLGKTSKDVSIKEISTKSANLITASPNETVSN 132

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            M  +   +I  L ++D+    +GIV   DL++
Sbjct: 133 CMAKMLMKDIRHLPLLDNDGGVVGIVSIKDLVK 165


>gi|166712368|ref|ZP_02243575.1| inositol-5-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzicola BLS256]
          Length = 485

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQAGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V+    + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VRPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+   +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNHSFELRGLITVKDIQKK 203


>gi|149182262|ref|ZP_01860742.1| hypothetical protein BSG1_19894 [Bacillus sp. SG-1]
 gi|148850031|gb|EDL64201.1| hypothetical protein BSG1_19894 [Bacillus sp. SG-1]
          Length = 133

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 46/104 (44%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
                    A + +S    G + VV +  ++ G++T+ D+  R    +    +++ VM  
Sbjct: 8   CSAQDNFQSAASKMSSLGVGALPVV-QNGQVVGMVTDRDLVVRGLSHNNAAGTIQGVMSN 66

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +  +  +  A  L+ QH +  L VV++    +G++   DL
Sbjct: 67  HVVTVSPNASVEEAAALMSQHQVRRLPVVENGN-LVGMLALGDL 109


>gi|325662141|ref|ZP_08150759.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|331085939|ref|ZP_08335022.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           9_1_43BFAA]
 gi|325471590|gb|EGC74810.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|330406862|gb|EGG86367.1| inosine-5'-monophosphate dehydrogenase [Lachnospiraceae bacterium
           9_1_43BFAA]
          Length = 484

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEEQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D  T  +++ 
Sbjct: 96  DPFYLSPEHTLADANDLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDF-TKKIKES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 152 MTSEGLITAPEGITLEEAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|254436978|ref|ZP_05050472.1| inosine-5'-monophosphate dehydrogenase [Octadecabacter antarcticus
           307]
 gi|198252424|gb|EDY76738.1| inosine-5'-monophosphate dehydrogenase [Octadecabacter antarcticus
           307]
          Length = 482

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 58/167 (34%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGG-----MGVIHKNLSVDEQAREVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    L DA  ++    F    VVDE  ++ GI+T  D+      D     V  +
Sbjct: 94  NPVTLRPDQTLADAKALIERYNFTGFPVVDEKGRVMGIVTNRDMRFATSDD---QPVSTM 150

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  N   I  E      A+ +++   +  L+V D      G++   D
Sbjct: 151 MTSNDLAIMREPADRDEAISMMKSKRLEKLLVTDGNGVLTGLLTLKD 197



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++N +   VVD+  + +GIV   D+
Sbjct: 94  NPVTLRPDQTLADAKALIERYNFTGFPVVDEKGRVMGIVTNRDM 137


>gi|126457333|ref|YP_001075437.1| HPP family/CBS domain-containing protein [Burkholderia pseudomallei
           1106a]
 gi|217419263|ref|ZP_03450770.1| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           576]
 gi|242311705|ref|ZP_04810722.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106b]
 gi|254193129|ref|ZP_04899564.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           S13]
 gi|126231101|gb|ABN94514.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106a]
 gi|169649883|gb|EDS82576.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           S13]
 gi|217398567|gb|EEC38582.1| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           576]
 gi|242134944|gb|EES21347.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1106b]
          Length = 465

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 250 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 301

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 302 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 360

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 361 RVVGIVTRADLSKA 374



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 332 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 391

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  L    VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 392 RSLVGPALVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 451

Query: 336 LRFGI 340
           +  G+
Sbjct: 452 I-AGL 455


>gi|311278571|ref|YP_003940802.1| inosine-5'-monophosphate dehydrogenase [Enterobacter cloacae SCF1]
 gi|308747766|gb|ADO47518.1| inosine-5'-monophosphate dehydrogenase [Enterobacter cloacae SCF1]
          Length = 488

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 57/170 (33%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S V+      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAAEVKRVKKHESGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV EG +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLREVKELTERNGFAGYPVVTEGNELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V    + +  +   +VVD      G++   D  + 
Sbjct: 155 PKERLVTVREGEAREVVFAKMHEKRVEKALVVDGSFHLRGMITVKDFQKA 204


>gi|303243549|ref|ZP_07329891.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302486110|gb|EFL49032.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 317

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 10/103 (9%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN--PK 294
             L D I    + R     VVDE  KL G++T  D+ +      N  +++D+M       
Sbjct: 72  TKLKDFIE---KYRHMGYPVVDENGKLVGVVTFKDLEKK-----NKKTIKDIMTPKEELI 123

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +I  +T  + + +++ +++I  L+VVD     +GIV   D+++
Sbjct: 124 LISPETSASESQKIMAKNDIGRLLVVDSNGNLMGIVTKGDIVK 166



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 29/62 (46%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  D+M   + + L+       ++  I+++   G + VVD    L GI+T+GDI +
Sbjct: 107 KNKKTIKDIMTPKEELILISPETSASESQKIMAKNDIGRLLVVDSNGNLMGIVTKGDIVK 166

Query: 275 NF 276
            +
Sbjct: 167 TY 168


>gi|299069920|emb|CBJ41204.1| putative transcriptional regulator, hexR [Ralstonia solanacearum
           CMR15]
          Length = 277

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 5/139 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R +      L+ L   L          AV  ++A + R+ + G G SG +     +    
Sbjct: 106 RILQDTIDALALLRDQLDAR---ALDAAVALLEAAR-RIDLYGFGSSGVVARDAQTKFFR 161

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +            L ++   D++I +S SG   EL+  +   R   + ++AIT+  
Sbjct: 162 YGIAADAYSDPYLMSMSLNVLQAGDVVIAISKSGDLPELQTAVERVRELGVRVVAITA-P 220

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A  AD+ L    E +
Sbjct: 221 GSRLAALADVTLPADVEAD 239


>gi|262283196|ref|ZP_06060963.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
 gi|262261448|gb|EEY80147.1| CBS domain-containing protein [Streptococcus sp. 2_1_36FAA]
          Length = 218

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   ++DVMI+    + +   L  A+ L+ ++ + +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKIKDVMIRKVITVSQYASLEDAIYLMLKNKVGILPVVDNEQ-VYGVITDRDIFKA 129



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVT 48



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI ++ + + G + VVD  +++ G+IT+ DIF+ F
Sbjct: 81  MIRKVITVSQYASLEDAIYLMLKNKVGILPVVD-NEQVYGVITDRDIFKAF 130


>gi|269798320|ref|YP_003312220.1| signal transduction protein with CBS domains [Veillonella parvula
           DSM 2008]
 gi|282850559|ref|ZP_06259938.1| CBS domain protein [Veillonella parvula ATCC 17745]
 gi|294792184|ref|ZP_06757332.1| putative signal-transduction protein with CBS domains [Veillonella
           sp. 6_1_27]
 gi|294794049|ref|ZP_06759186.1| putative signal-transduction protein with CBS domains [Veillonella
           sp. 3_1_44]
 gi|269094949|gb|ACZ24940.1| putative signal transduction protein with CBS domains [Veillonella
           parvula DSM 2008]
 gi|282580052|gb|EFB85456.1| CBS domain protein [Veillonella parvula ATCC 17745]
 gi|294455619|gb|EFG23991.1| putative signal-transduction protein with CBS domains [Veillonella
           sp. 3_1_44]
 gi|294457414|gb|EFG25776.1| putative signal-transduction protein with CBS domains [Veillonella
           sp. 6_1_27]
          Length = 151

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/136 (19%), Positives = 50/136 (36%), Gaps = 27/136 (19%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDLNTLS 284
              V    P+ D   +L +     V+VVD+  KL GII+EGD+       +    +N L 
Sbjct: 11  PVTVGKDAPISDVADLLVKYNLTAVSVVDDDNKLLGIISEGDLLYKKVRPHVPHYVNVLG 70

Query: 285 VE----------------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                                   ++M         D  +   + ++   ++  + VVD 
Sbjct: 71  ASIYYNGIGEYNAQFKKLLASHVHELMTDEVITTTPDKDVEEIVSVMLDQHLKNVPVVDK 130

Query: 323 CQKAIGIVHFLDLLRF 338
             + IGI+   D+++ 
Sbjct: 131 EYRLIGILSRRDIIKL 146



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 34/58 (58%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +++VM K P  + +D  ++    LL ++N++ + VVDD  K +GI+   DLL   +
Sbjct: 1   MKIQEVMNKYPVTVGKDAPISDVADLLVKYNLTAVSVVDDDNKLLGIISEGDLLYKKV 58



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               + + ++++ ++    V VVD+  +L GI++  DI +   KD
Sbjct: 106 PDKDVEEIVSVMLDQHLKNVPVVDKEYRLIGILSRRDIIKLIAKD 150


>gi|158430766|pdb|2RC3|A Chain A, Crystal Structure Of Cbs Domain, Ne2398
 gi|158430767|pdb|2RC3|B Chain B, Crystal Structure Of Cbs Domain, Ne2398
 gi|158430768|pdb|2RC3|C Chain C, Crystal Structure Of Cbs Domain, Ne2398
 gi|158430769|pdb|2RC3|D Chain D, Crystal Structure Of Cbs Domain, Ne2398
          Length = 135

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G +      +   G ++  +     + +A+  ++    G + V+ + +KL GI+TE D  
Sbjct: 3   GHMKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVM-KDEKLVGILTERDFS 61

Query: 274 RN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      K +    V+++M +    +  +      M L+ +  +  L V+DD  K IG++
Sbjct: 62  RKSYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD-GKVIGLL 120

Query: 331 HFLDLLR 337
              DL++
Sbjct: 121 SIGDLVK 127


>gi|323698200|ref|ZP_08110112.1| Nucleotidyl transferase [Desulfovibrio sp. ND132]
 gi|323458132|gb|EGB13997.1| Nucleotidyl transferase [Desulfovibrio desulfuricans ND132]
          Length = 354

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 44/109 (40%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVED 287
              ++ +   + +A   L+      V +  E  +L G++T+GDI R             +
Sbjct: 5   RNAIIPLSATVREAAETLNRTSLQIVMLAGEDGRLMGVVTDGDIRRGLLAGKTLESPATE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M       +        ++ +R+ NI  + ++D   + IG+    D++
Sbjct: 65  IMETKFFSAVPSDDQAALLRTMRERNIRQVPLLDPNGRVIGLRTLFDII 113


>gi|312862989|ref|ZP_07723228.1| CBS domain protein [Streptococcus vestibularis F0396]
 gi|311101484|gb|EFQ59688.1| CBS domain protein [Streptococcus vestibularis F0396]
          Length = 219

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 35/118 (29%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ +K    + V+ E  KL G+ITEG I                +  L
Sbjct: 14  VSPETTVAAATDIMRDKGLRRLPVI-EHDKLVGLITEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+ R 
Sbjct: 73  NKTKVGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDNDQ-ISGIITDKDVFRA 129



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  +T +  A  ++R   +  L V++   K +G++ 
Sbjct: 1   MAVKDFMTKRVVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLIT 48



 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+FR F
Sbjct: 88  VSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAF 130


>gi|228937988|ref|ZP_04100609.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
 gi|228970865|ref|ZP_04131502.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228977469|ref|ZP_04137861.1| CBS domain protein [Bacillus thuringiensis Bt407]
 gi|228782113|gb|EEM30299.1| CBS domain protein [Bacillus thuringiensis Bt407]
 gi|228788674|gb|EEM36616.1| CBS domain protein [Bacillus thuringiensis serovar thuringiensis
           str. T01001]
 gi|228821614|gb|EEM67618.1| CBS domain protein [Bacillus thuringiensis serovar berliner ATCC
           10792]
          Length = 132

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 1   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ Q+ I  L VVD   + IG++   DL
Sbjct: 60  KITNVMTTNIISVSPNDSIEKATELMAQYQIRRLPVVD-SGQLIGMLALGDL 110


>gi|256829700|ref|YP_003158428.1| CBS domain-containing membrane protein [Desulfomicrobium baculatum
           DSM 4028]
 gi|256578876|gb|ACU90012.1| CBS domain containing membrane protein [Desulfomicrobium baculatum
           DSM 4028]
          Length = 196

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 54/133 (40%), Gaps = 22/133 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  ++ G    +A  +++        V+D   ++ G+++E D  R           
Sbjct: 58  MTAPVHCLQKGMSASEAAALMAGLGISGAPVLDVEGRICGVVSEKDYLRKMGLPGTASFM 117

Query: 278 --------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                          D+  L V+D+M   P V   +T +    ++L +H+I+ L + D+ 
Sbjct: 118 TVVSTCLSTPGCMVTDVRKLLVDDIMSSPPVVASRETPVAELSEMLARHSINRLPICDEE 177

Query: 324 QKAIGIVHFLDLL 336
            + +GIV   DL+
Sbjct: 178 GRPVGIVTRTDLV 190



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  +  + ED+M      + +    + A  L+    IS   V+D   +  G+V   D
Sbjct: 44  ALKRVRSLGTAEDIMTAPVHCLQKGMSASEAAALMAGLGISGAPVLDVEGRICGVVSEKD 103

Query: 335 LLRF 338
            LR 
Sbjct: 104 YLRK 107


>gi|226948624|ref|YP_002803715.1| transcriptional regulator, RpiR family [Clostridium botulinum A2
           str. Kyoto]
 gi|226841231|gb|ACO83897.1| transcriptional regulator, RpiR family [Clostridium botulinum A2
           str. Kyoto]
          Length = 281

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +   AV+ IK  +  + + G+G S  +       L        F   +         I
Sbjct: 116 DEKLLEAVKAIKNAET-IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHI 174

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T  D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +  
Sbjct: 175 TNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDL 234

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLES 196
             G    +S   QL + D+L + + + 
Sbjct: 235 RIGAI--SSRTSQLFVTDSLFLGIAKE 259


>gi|170287905|ref|YP_001738143.1| CBS domain-containing protein [Thermotoga sp. RQ2]
 gi|170175408|gb|ACB08460.1| CBS domain containing membrane protein [Thermotoga sp. RQ2]
          Length = 150

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     +   I +LS +    V VVD   ++ G ++E D+ +                  
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPD 73

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +    V D M K P V+ ED  L VA   L +H    L VVD+  + +GI
Sbjct: 74  TNQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGI 133

Query: 330 VHFLDLLR 337
           V  +D+LR
Sbjct: 134 VRRIDILR 141



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ED  +   ++LL + N+S + VVD   + +G V   DL++ 
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKA 56



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 23/54 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                 +VK   PLI A   L    F  + VVDE  +L GI+   DI R   + 
Sbjct: 93  MNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILRVVSEG 146


>gi|148269243|ref|YP_001243703.1| CBS domain-containing protein [Thermotoga petrophila RKU-1]
 gi|281411541|ref|YP_003345620.1| hypothetical protein [Thermotoga naphthophila RKU-10]
 gi|147734787|gb|ABQ46127.1| CBS domain containing protein [Thermotoga petrophila RKU-1]
 gi|281372644|gb|ADA66206.1| CBS domain containing membrane protein [Thermotoga naphthophila
           RKU-10]
          Length = 150

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     +   I +LS +    V VVD   ++ G ++E D+ +                  
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPD 73

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +    V D M K P V+ ED  L VA   L +H    L VVD+  + +GI
Sbjct: 74  TNQLIRNVVKIKDRPVSDFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGI 133

Query: 330 VHFLDLLR 337
           V  +D+LR
Sbjct: 134 VRRIDILR 141



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ED  +   ++LL + N+S + VVD   + +G V   DL++ 
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKA 56



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 23/54 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                 +VK   PLI A   L    F  + VVDE  +L GI+   DI R   + 
Sbjct: 93  MNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILRVVSEG 146


>gi|78043747|ref|YP_359045.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995862|gb|ABB14761.1| acetoin utilization protein AcuB [Carboxydothermus hydrogenoformans
           Z-2901]
          Length = 210

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------H 277
               +  VK    + +A+    EKR   + VVD+  KL GI+++ D+            +
Sbjct: 7   MTRELITVKSTDTIREAMAKGHEKRIRHLPVVDD-GKLVGIVSDRDLRYACPSPFTGEKN 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +   + V D+M K          +  A +++ ++ +  L V+ D +  +GI+   D++ 
Sbjct: 66  GECWQIKVGDIMQKRVVTAHPLDPVEEAAKMMLENRVGCLPVLLDDE-LVGIITQGDIVM 124

Query: 338 F 338
            
Sbjct: 125 A 125



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+D+M +    +     +  AM    +  I  L VVDD  K +GIV   DL
Sbjct: 3   VKDIMTRELITVKSTDTIREAMAKGHEKRIRHLPVVDD-GKLVGIVSDRDL 52



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 9/89 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE---DVMI 290
               P+ +A  ++ E R GC+ V+ + + L GIIT+GDI   F + +         +V +
Sbjct: 85  HPLDPVEEAAKMMLENRVGCLPVLLDDE-LVGIITQGDIVMAFAELMGVYKRSSRIEVQV 143

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            +        L  VA Q++++ NI+V+ V
Sbjct: 144 PD----RPGMLAEVA-QIMKELNINVVSV 167


>gi|56421284|ref|YP_148602.1| hypothetical protein GK2749 [Geobacillus kaustophilus HTA426]
 gi|56381126|dbj|BAD77034.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
          Length = 435

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   D    +++  P+     +  E R     VVD+  K++G++T  
Sbjct: 182 QLIKKEIVLVEDILIPLDKTAYLRVHDPIERWYALNKETRHSRFPVVDDELKVQGVVTAK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+      D   L +E VM K P  +   T +  A  ++    I +L VVDD  +  GI+
Sbjct: 242 DV---LDVD-RQLPIEKVMTKQPITVNGKTSVAFASHIMVWEGIELLPVVDDYNRLQGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|16801986|ref|NP_472254.1| hypothetical protein lin2927 [Listeria innocua Clip11262]
 gi|16415468|emb|CAC98152.1| lin2927 [Listeria innocua Clip11262]
          Length = 268

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ EN
Sbjct: 224 SKRYFANSQFSIMYVMDIISMMLLQNESYREN 255


>gi|295099266|emb|CBK88355.1| Predicted transcriptional regulator, contains C-terminal CBS
           domains [Eubacterium cylindroides T2-87]
          Length = 215

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 13/111 (11%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNTL 283
              + + I ++++ +   V V  E  KL G+ITEG I  +             +  L+  
Sbjct: 18  DTTISEIIDLMNQNKIHRVPVT-ENGKLVGLITEGMISNSGTSQATSLSIYELNYLLSKT 76

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +VE VMIKN   + +D L+  A   + + +I  L VVD     +GI+   D
Sbjct: 77  TVETVMIKNVVSVDQDELMEYATSKMLKSDIGCLPVVDQTGDVVGILTQTD 127



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             V+D M K+     +DT ++  + L+ Q+ I  + V  +  K +G++ 
Sbjct: 2   FKVKDFMTKDVICTEKDTTISEIIDLMNQNKIHRVPVT-ENGKLVGLIT 49


>gi|294668276|ref|ZP_06733381.1| hypothetical protein NEIELOOT_00189 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
 gi|291309795|gb|EFE51038.1| hypothetical protein NEIELOOT_00189 [Neisseria elongata subsp.
           glycolytica ATCC 29315]
          Length = 501

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/168 (17%), Positives = 63/168 (37%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ +           + P  +   +                
Sbjct: 53  NLPLLSAAMDTVTEARLAISMAQEGGLGIIH-KNMSPDMQAKAVAKVKRHESGVVKDPVT 111

Query: 233 VKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           V     + + + + ++++     + V E  K+ GI+T  D+   F   L  L V  +M  
Sbjct: 112 VAPNVLIRELLELRAQRKRKMSGLPVVENGKVVGIVTNRDLR--FETRL-DLPVSAIMTP 168

Query: 292 N--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 + E   +  A +L+ QH +  ++V++   +  G++   D+++
Sbjct: 169 RERLVTVAEGASIEEARELMHQHKVERVLVLNANDELKGLITVKDIIK 216


>gi|27379751|ref|NP_771280.1| hypothetical protein bll4640 [Bradyrhizobium japonicum USDA 110]
 gi|27352904|dbj|BAC49905.1| bll4640 [Bradyrhizobium japonicum USDA 110]
          Length = 252

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 26/142 (18%), Positives = 45/142 (31%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  ++   P+ DAI ++       + VVD    L GII E D  R      
Sbjct: 2   RAYQIMSRQVVSIRPEAPITDAIKVMLAHHISGLPVVDSADNLVGIICESDFLRRSEIGT 61

Query: 281 NT------------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                       VE VM + P    E   L     ++ + +++ 
Sbjct: 62  EHERNRLLSLLLGAERVASEFVKERGRKVEQVMTRQPVTTNEQAPLDEVADVMERRHLNH 121

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + V+    + +GI+   D L  
Sbjct: 122 IPVMRAD-RIVGIITRSDFLSA 142



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +M +    I  +  +T A++++  H+IS L VVD     +GI+   D LR
Sbjct: 1   MRAYQIMSRQVVSIRPEAPITDAIKVMLAHHISGLPVVDSADNLVGIICESDFLR 55


>gi|85711669|ref|ZP_01042726.1| Signal-transduction protein [Idiomarina baltica OS145]
 gi|85694529|gb|EAQ32470.1| Signal-transduction protein [Idiomarina baltica OS145]
          Length = 617

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 29/156 (18%), Positives = 64/156 (41%), Gaps = 7/156 (4%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             DA A A+    +    +  V     +          ++       +++    +I+A  
Sbjct: 118 EYDAFADAVEVEEH-QRVNLAVREREQRNDLFIETVETLL--SRQPVIIESDASIIEAAQ 174

Query: 245 ILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTL 301
            +++++   + +  D    + GIIT+ D+ +     +   +  V DVM  N   I  +  
Sbjct: 175 KMTDEQVSSLLICGDNPDDVLGIITDKDLRKRVLAVERAPSDPVRDVMSSNLVYIEHNQR 234

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  AM  + + N+  L V+   Q+ IG++   D++R
Sbjct: 235 IFEAMLTMLRTNLHHLPVL-KKQRLIGVIALSDVVR 269


>gi|323526464|ref|YP_004228617.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1001]
 gi|323383466|gb|ADX55557.1| inosine-5'-monophosphate dehydrogenase [Burkholderia sp. CCGE1001]
          Length = 486

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTAAEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +       VV EG +L GI+T  D+   F + L+   V  +M 
Sbjct: 97  ITVPPQMKVRDVIALSHQHGISGFPVV-EGSQLIGIVTNRDLR--FEERLDE-PVRSIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 153 PRERLVTVKEGTSLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|237737262|ref|ZP_04567743.1| transcriptional regulator [Fusobacterium mortiferum ATCC 9817]
 gi|229421124|gb|EEO36171.1| transcriptional regulator [Fusobacterium mortiferum ATCC 9817]
          Length = 284

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 73/175 (41%), Gaps = 5/175 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            + + +   R I  E   ++++  + +     +   AV  +   + ++++ GIG SG + 
Sbjct: 92  PDDSFEIIGRKISNEN--ITAISDTYEVTDFTELEKAVVMLSKAR-KIMLAGIGFSGIVA 148

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                 L   G  +            L  +  DD++ V+S SG + E+  ++  A+   I
Sbjct: 149 KDFYYKLLELGKHAMIEVDTHMQLSCLSTMGEDDVLFVISHSGKTMEMYNVVKVAKSKGI 208

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            +IA+TS   + +   ADI L    E  S        +  I QL + D L + ++
Sbjct: 209 TVIAMTSIAPNPIKDLADIRLNT-VEMNSN-FRSTALSPRISQLTVIDMLYVKMM 261


>gi|225023377|ref|ZP_03712569.1| hypothetical protein EIKCOROL_00235 [Eikenella corrodens ATCC
           23834]
 gi|224943855|gb|EEG25064.1| hypothetical protein EIKCOROL_00235 [Eikenella corrodens ATCC
           23834]
          Length = 512

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ +          ++H    +       + V      +  
Sbjct: 64  NMPLISAAMDTVTEARLAISMAQEGGIG-----IIHKNMSIKRQAEAVAKVKRHESGVVK 118

Query: 233 VKIGCP---LIDAITILSEKR---FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +      L+  +  +  +R      + VV +  KL G++T  D+   F   L+   V 
Sbjct: 119 DPVTIAPEMLVGQLLEMRAQRKRQMSGLPVV-QDGKLVGLVTNRDLR--FETRLDQ-PVS 174

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        + E T +  A +L+ QH +  ++VV+   +  G++   D+L+
Sbjct: 175 AIMTPRAELVTVPEGTSIEDARELMHQHKVERVLVVNAQDELKGLITVRDILK 227


>gi|134096967|ref|YP_001102628.1| transcriptional regulator [Saccharopolyspora erythraea NRRL 2338]
 gi|291006287|ref|ZP_06564260.1| transcriptional regulator [Saccharopolyspora erythraea NRRL 2338]
 gi|133909590|emb|CAL99702.1| RpiR-family transcriptional regulator [Saccharopolyspora erythraea
           NRRL 2338]
          Length = 308

 Score = 79.2 bits (194), Expect = 9e-13,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 65/178 (36%), Gaps = 6/178 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++   +   +   A+ + +      L  E       AV    A   R+ + G+G S  + 
Sbjct: 103 EDDVRKIIEKVSYADAKAVEETADQLDAETLRSLVDAV----ARARRIDVYGVGASAFVA 158

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L   L   G   F       +     ++   D+ I +S +G++ E    L  A +   
Sbjct: 159 LDLQQKLHRIGLTCFAWSDTHNALTSAAVLREGDVAIGISHTGATTETVEALQEAGKRGA 218

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              A+T+  +S +   AD VLT      +   G     S I QL + D L I + +  
Sbjct: 219 TTAALTNFARSPITEVADHVLTTAVRETTYRSGA--MASRIGQLTVIDCLFIGVAQRH 274


>gi|331702008|ref|YP_004398967.1| RpiR family transcriptional regulator [Lactobacillus buchneri NRRL
           B-30929]
 gi|329129351|gb|AEB73904.1| transcriptional regulator, RpiR family [Lactobacillus buchneri NRRL
           B-30929]
          Length = 281

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 72/180 (40%), Gaps = 8/180 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A +   + +R +    + +  +   +F  AV +I   + R+ + G+G S         
Sbjct: 95  TIADKIFNSSQRAIQDTRAGIDED---EFARAVLRIIHCR-RLGLFGLGGSSVAALDGYH 150

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
               T    F+    +    +   +  +D  IV+S SG + +   +    ++  +P+I I
Sbjct: 151 KFLRTSIDCFYYPDFDVQLMEAVKLGEEDCAIVVSHSGKNRQTLKVAETLKKRKVPVIGI 210

Query: 145 TSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           TS   S +A H+DI  ++   E      G+    S + QLAI D L +        +  D
Sbjct: 211 TSYPDSPLALHSDITFISSSDESNYRSEGM---YSLLAQLAIVDTLFMMATVRMGPATED 267


>gi|90410883|ref|ZP_01218897.1| inositol-5-monophosphate dehydrogenase [Photobacterium profundum
           3TCK]
 gi|90328096|gb|EAS44407.1| inositol-5-monophosphate dehydrogenase [Photobacterium profundum
           3TCK]
          Length = 487

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        AIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMVSAAMDTVTEGRFAIALAQEGGIGFIHKNMSIEQQANQVRMVKKFEAGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   +  E  F    VV +  +L GIIT  D+   F  DL ++ VEDVM 
Sbjct: 98  VTVKPTATIADVKQLTLENGFAGYPVVSDNNELVGIITGRDVR--FVTDL-SMKVEDVMT 154

Query: 291 KNPKV----ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             PK       E         +++++ +  +++V+D  +  G++   D  + 
Sbjct: 155 --PKTKLAAAKEGASREDVEAIMQEYRVEKVLLVNDDFQLKGMITAKDFQKA 204


>gi|330813935|ref|YP_004358174.1| CBS domain protein [Candidatus Pelagibacter sp. IMCC9063]
 gi|327487030|gb|AEA81435.1| CBS domain protein [Candidatus Pelagibacter sp. IMCC9063]
          Length = 204

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
           +   P+ +  T L E+  G V +VD   KL GI++E DI        KD +  + +++M 
Sbjct: 19  QPDTPISEIATALKERSIGAVPIVDNANKLVGIVSERDIVTKLVVEAKDADLTTAKEIMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   +  +   + +++  NI  + VV++           D LR 
Sbjct: 79  SEIIAAKLNDSIDSIIAIMKNKNIRHMPVVNEDNILTDFFSIRDFLRA 126


>gi|171185683|ref|YP_001794602.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934895|gb|ACB40156.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 136

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLNT-LSVEDVMIK 291
               + +  +I+S +R G V +VD      + G+++E DI R   + L+    VE+VM  
Sbjct: 16  PDASIREVASIMSSRRIGLVVIVDRRNPELVVGVVSERDIIRAVAQGLDLGRPVEEVMSA 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  +  +    +++++H I   +VV    +  G++   DLL
Sbjct: 76  PAIAVEAEEPVWRVAEIMQRHGIRH-VVVTRGGRLYGVISIRDLL 119



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIVHFLDLLRF 338
             D   +       D  +     ++    I ++++VD       +G+V   D++R 
Sbjct: 3   ARDFAKRPVVTSTPDASIREVASIMSSRRIGLVVIVDRRNPELVVGVVSERDIIRA 58


>gi|307296973|ref|ZP_07576789.1| putative signal transduction protein with CBS domains [Sphingobium
           chlorophenolicum L-1]
 gi|306877499|gb|EFN08727.1| putative signal transduction protein with CBS domains [Sphingobium
           chlorophenolicum L-1]
          Length = 142

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +   +    ++  + +L+++R GCV VVD+  ++ GI +E D+     ++   
Sbjct: 7   LQRKGQDVVQAQSSDTVLSVVRLLAQRRIGCVPVVDD-GRVVGIFSERDLAYRVAQEGAA 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    V ++M          T +   + L+ +  I  L VV      +G+V   DL++F 
Sbjct: 66  VLDRPVGEIMTAPAITTDGRTPVNHCLSLMTKRRIRHLPVV-VDGALVGLVSIGDLVKFR 124

Query: 340 I 340
           I
Sbjct: 125 I 125


>gi|294789241|ref|ZP_06754480.1| inosine-5'-monophosphate dehydrogenase [Simonsiella muelleri ATCC
           29453]
 gi|294482982|gb|EFG30670.1| inosine-5'-monophosphate dehydrogenase [Simonsiella muelleri ATCC
           29453]
          Length = 488

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 66/173 (38%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          V+H         +    V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----VIHKNMTPEQQALAVRKVKRHESGIVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               V     + D ++  ++++     + VV E  K+ GI+T  D+   F   L  L V 
Sbjct: 95  DPVTVSPDKLIGDLLSERAQRKRKMSGLPVV-ENGKVIGIVTNRDLR--FETRL-DLPVS 150

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        +   T +  A +++ QH I  ++V+++  +  G++   D+++
Sbjct: 151 AIMTPRDKLVSVSVGTSIEEAREVMHQHKIERVLVLNEQDELKGLITVKDIIK 203



 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            S +M   D +  V +G  + +A  ++ + +   V V++E  +LKG+IT  DI +N
Sbjct: 149 VSAIMTPRDKLVSVSVGTSIEEAREVMHQHKIERVLVLNEQDELKGLITVKDIIKN 204


>gi|260893686|ref|YP_003239783.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ammonifex degensii KC4]
 gi|260865827|gb|ACX52933.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Ammonifex degensii KC4]
          Length = 633

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 4/135 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                 ++    +           +      C L      L+      V VVD   +  G
Sbjct: 145 RERYASRVEERPLRRRLYEIMSTPVQTCTPECTLSTVADKLTRHGISSVVVVDPAGRPLG 204

Query: 266 IITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           ++TE ++ +         + ++V +VM ++P V+   TL   A+  + Q      +VV +
Sbjct: 205 LVTEKELVKAMTTPGFSPDKVTVREVMRQDPLVLSPGTLTREALVGMVQRQAKH-VVVAE 263

Query: 323 CQKAIGIVHFLDLLR 337
            ++  GIV   DLLR
Sbjct: 264 KERVCGIVTLSDLLR 278



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 26/52 (50%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++M    +    +  L+     L +H IS ++VVD   + +G+V   +L++ 
Sbjct: 163 EIMSTPVQTCTPECTLSTVADKLTRHGISSVVVVDPAGRPLGLVTEKELVKA 214


>gi|150401626|ref|YP_001325392.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150014329|gb|ABR56780.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 315

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 49/125 (39%), Gaps = 8/125 (6%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +             +  +         I  + + R     V+D   KL G++T  D+ +
Sbjct: 47  KVLDKIPVKEIMTKDLVSINESETAKQLIKYIEKYRHMGYPVIDNNNKLVGVVTFNDLEK 106

Query: 275 NFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                     + D+M        I+ DT  + +  ++  ++I  L+VVDD  + +G+V  
Sbjct: 107 ------GHAIIRDIMTPKEKLITIMPDTSASESQNIMANNDIGRLLVVDDNGELLGLVSR 160

Query: 333 LDLLR 337
            D+++
Sbjct: 161 GDIVK 165



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 30/67 (44%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             D+M   + +  +       ++  I++    G + VVD+  +L G+++ GDI + +   
Sbjct: 111 IRDIMTPKEKLITIMPDTSASESQNIMANNDIGRLLVVDDNGELLGLVSRGDIVKTYRTY 170

Query: 280 LNTLSVE 286
                ++
Sbjct: 171 GKKTKIQ 177


>gi|51245115|ref|YP_064999.1| acetoin utilization protein AcuB [Desulfotalea psychrophila LSv54]
 gi|50876152|emb|CAG35992.1| related to acetoin utilization protein (AcuB) [Desulfotalea
           psychrophila LSv54]
          Length = 240

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 68/145 (46%), Gaps = 17/145 (11%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   L   F+    +MH+      +     L+ A  I+  K F  + VV+    L+GI++
Sbjct: 9   PPHTLQENFMYIGHIMHTDLVT--ISPTTNLVTARKIMDSKSFDHLLVVNNRGVLEGILS 66

Query: 269 EGDIFRNFHKDLNTLSVED------------VMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           + D+ +N+     TLSV +            +M+K    I   T +  A  +++Q+NIS 
Sbjct: 67  DKDLKQNWASPATTLSVYELTSLLEQVQVKSIMVKTVLTITVSTTVERAAYIMQQNNISA 126

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGII 341
           L V+D+  +  GI+   D++  G++
Sbjct: 127 LPVLDN-NRLAGIITSTDVM--GVL 148


>gi|152974433|ref|YP_001373950.1| signal-transduction protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152023185|gb|ABS20955.1| putative signal-transduction protein with CBS domains [Bacillus
           cytotoxicus NVH 391-98]
          Length = 144

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +I        + +A   + E+  G + VVD   ++ G++T+ D+       K   + 
Sbjct: 8   MSTNIVQCTPLDNVYEAAVKMKEEEIGMIPVVD-NNQIVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ +H +  L VV +    +G++   DL
Sbjct: 67  KITNVMTTNIVSVAPNDPVEKATELMARHQVRRLPVV-ENGVLVGMLALGDL 117



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V D+M  N         +  A   +++  I ++ VVD+  + +G+V   DL+  GI
Sbjct: 4   VRDLMSTNIVQCTPLDNVYEAAVKMKEEEIGMIPVVDN-NQIVGLVTDRDLVVRGI 58


>gi|84514689|ref|ZP_01002053.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Loktanella vestfoldensis SKA53]
 gi|84511740|gb|EAQ08193.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Loktanella vestfoldensis SKA53]
          Length = 611

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 9/144 (6%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R  + ND     P     T                       +     ++ + R  C+ V
Sbjct: 128 RGRTRNDADATRPATLTETRV-----DQLMAADPVTCSADDTITAIAKLMRQYRISCLPV 182

Query: 257 VDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +  G +L GI+T  DI  R   + L+T L V  +M  NP+ +    + +  + ++ +   
Sbjct: 183 M-AGTRLAGIVTLHDINNRVVAEGLDTGLPVSRIMTANPETLPPSAIGSDVLHMMMERRF 241

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
             + +VD C + +GIV   +L RF
Sbjct: 242 GHVPIVDQC-RLVGIVTQTNLTRF 264


>gi|332158092|ref|YP_004423371.1| hypothetical protein PNA2_0450 [Pyrococcus sp. NA2]
 gi|331033555|gb|AEC51367.1| hypothetical protein PNA2_0450 [Pyrococcus sp. NA2]
          Length = 172

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 17/150 (11%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                              +        V+   PL + I++ + +    V VVDE  KL 
Sbjct: 18  ARKEELSHNIKYISKVPVRIVMDKEFLKVRPETPLFELISMFTSEETSAV-VVDEEGKLV 76

Query: 265 GIITEGDIFRNFHKDL----------------NTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           G IT  D+   F                        VED+MIK P VI  +  L  A++L
Sbjct: 77  GFITMKDLLHYFVPPRKYSIAGFGMLKKYILSRATRVEDIMIKKPIVIDVNENLGQAIKL 136

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +     L VVD  +K  GI+   D++R 
Sbjct: 137 MVETGKHHLPVVDKDRKVYGILEVKDIIRL 166


>gi|330874152|gb|EGH08301.1| nucleotidyltransferase [Pseudomonas syringae pv. glycinea str. race
           4]
          Length = 611

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 150 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 209

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 210 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 260



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 143 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 199


>gi|157151138|ref|YP_001450902.1| acetoin utilization putative/CBS domain-containing protein
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157075932|gb|ABV10615.1| acetoin utilization putative/CBS domain protein [Streptococcus
           gordonii str. Challis substr. CH1]
          Length = 218

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   ++DVMI+    + +   L  A+ L+ ++ + +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKIKDVMIRKVITVSQYASLEDAIYLMLKNKVGILPVVDNEQ-VYGVITDRDIFKA 129



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADIMREQGLHRLPVIEND-KLVGLVT 48



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI ++ + + G + VVD  +++ G+IT+ DIF+ F
Sbjct: 81  MIRKVITVSQYASLEDAIYLMLKNKVGILPVVD-NEQVYGVITDRDIFKAF 130


>gi|33593603|ref|NP_881247.1| inosine-5'-monophosphate dehydrogenase [Bordetella pertussis Tohama
           I]
 gi|33595927|ref|NP_883570.1| inosine-5'-monophosphate dehydrogenase [Bordetella parapertussis
           12822]
 gi|33601309|ref|NP_888869.1| inosine-5'-monophosphate dehydrogenase [Bordetella bronchiseptica
           RB50]
 gi|33566006|emb|CAE36560.1| inosine-5'-monophosphate dehydrogenase [Bordetella parapertussis]
 gi|33572959|emb|CAE42901.1| inosine-5'-monophosphate dehydrogenase [Bordetella pertussis Tohama
           I]
 gi|33575745|emb|CAE32822.1| inosine-5'-monophosphate dehydrogenase [Bordetella bronchiseptica
           RB50]
 gi|332383008|gb|AEE67855.1| inosine-5-monophosphate dehydrogenase [Bordetella pertussis CS]
          Length = 486

 Score = 79.2 bits (194), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 66/171 (38%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNLSADDQAKEVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG+KL GI+T  D+     +D     + ++
Sbjct: 95  DPVTVTPDMKVRDAIALQRQHGISGLPVV-EGRKLVGIVTNRDLRF---EDRLDQPLRNI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPQDRLVTMKEGATLDEAQALMHKHRLERVLIVNDAFELRGLATVKDIVK 201


>gi|326802801|ref|YP_004320619.1| putative 6-phospho 3-hexuloisomerase [Aerococcus urinae
           ACS-120-V-Col10a]
 gi|326651707|gb|AEA01890.1| putative 6-phospho 3-hexuloisomerase [Aerococcus urinae
           ACS-120-V-Col10a]
          Length = 187

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 14/182 (7%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  L  L  ++  E   Q +  VE I      + +TG G+SG      A+ L   G    
Sbjct: 8   KEILEELLHNVAYENDDQLNDLVEAILKA-NHIFLTGAGRSGVGIRGFANRLMHLGFSVS 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +      H         DL+IV S SG +D L +    A++  + +  +T + +S +A 
Sbjct: 67  VIGEITNPHTH-----EGDLLIVGSGSGETDSLVSTAKKAKKNGVKIAILTMDVESTIAK 121

Query: 155 HADIVLTLP-KEPESCPHGL-----APTTSAIMQLAI--GDALAIALLESRNFSENDFYV 206
            AD+V+ LP   P+    G+      P  SA  QL    GD + + L++    + +  + 
Sbjct: 122 LADVVVLLPGVSPKLQHSGMDITSIQPMGSAFEQLLFLTGDGIILELMDRTGETSDSMFA 181

Query: 207 LH 208
            H
Sbjct: 182 RH 183


>gi|224285803|gb|ACN40616.1| unknown [Picea sitchensis]
          Length = 205

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
                  + DA+  +++   G + VV   E + + GIITE D  R      +   T  V 
Sbjct: 73  WCTTDDTVYDAVKSMTQHDVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVG 132

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M +      +  DT +  AMQL+  + I  + VV + +  +G+V   D++R 
Sbjct: 133 DIMTEENKLITVTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRA 185



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 177 TSAIMQLAIGDALAIALLESRNF----SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             ++ Q  +G  L +  +E ++     +E D+          +      D+M   + +  
Sbjct: 84  VKSMTQHDVGALLVVKPVEEKSIAGIITERDYLRKIIVQGRSSKTTKVGDIMTEENKLIT 143

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     ++ A+ ++++ R   + VV EG+ + G+++ GD+ R  
Sbjct: 144 VTSDTKVLKAMQLMTDNRIRHIPVV-EGKSMLGMVSIGDVVRAV 186


>gi|323529296|ref|YP_004231448.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1001]
 gi|323386298|gb|ADX58388.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1001]
          Length = 229

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   +  E       V+D    + G+I+EGD+ R      +           
Sbjct: 14  VTPDMTIREVARLFVENHISGAPVLDSDGSVAGMISEGDLLRRSEIGTDERKRTSWLDFW 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                           V DVM  N   +  DT L     +L   +I  + V     + +G
Sbjct: 74  SASHEARDYVKTHAAKVSDVMTTNVVTVGPDTPLGEVAGVLETRHIKRVPVT-KAGRLVG 132

Query: 329 IVHFLDLLRF 338
           IV   +L++ 
Sbjct: 133 IVSRANLVQA 142



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM      +  D  +    +L  +++IS   V+D      G++   DLLR
Sbjct: 1   MRASDVMTGKVISVTPDMTIREVARLFVENHISGAPVLDSDGSVAGMISEGDLLR 55


>gi|226195289|ref|ZP_03790879.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pakistan 9]
 gi|225932662|gb|EEH28659.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pakistan 9]
          Length = 465

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 250 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 301

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 302 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 360

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 361 RVVGIVTRADLSKA 374



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 332 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 391

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 392 RSLVGPAFVARAVMSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 451

Query: 336 LRFGI 340
           +  G+
Sbjct: 452 I-AGL 455



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V+   P+ + + + ++     + VVD   +L GI+T+ D+    ++
Sbjct: 405 MSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYR 457


>gi|289209024|ref|YP_003461090.1| nucleotidyltransferase [Thioalkalivibrio sp. K90mix]
 gi|288944655|gb|ADC72354.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Thioalkalivibrio sp. K90mix]
          Length = 625

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 5/132 (3%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
              GG  G L    +  +    S    +    L + +T + ++R G V  VD  Q+  GI
Sbjct: 152 SRDGGAAGQLNTPLA--LRIARSPVTCRPDTHLREVLTTMRDERVGSVVAVDAEQRPVGI 209

Query: 267 ITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            T  D+  R   KD+     ++ VM   P  + E       ++ + +H ++ L VV +  
Sbjct: 210 FTLRDLLARVALKDVGLDTPLDAVMTPGPVALEESAPGFEGIEAMTEHGMTHLCVVRE-G 268

Query: 325 KAIGIVHFLDLL 336
           + +G++   DLL
Sbjct: 269 RLVGVLGERDLL 280


>gi|171315497|ref|ZP_02904733.1| glucokinase [Burkholderia ambifaria MEX-5]
 gi|171099334|gb|EDT44072.1| glucokinase [Burkholderia ambifaria MEX-5]
          Length = 642

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S ++ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRVLHLLMIDVLA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|153854388|ref|ZP_01995666.1| hypothetical protein DORLON_01661 [Dorea longicatena DSM 13814]
 gi|149752914|gb|EDM62845.1| hypothetical protein DORLON_01661 [Dorea longicatena DSM 13814]
          Length = 484

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPDNTLEDANNLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDFSKKIRESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLITAPEGITLEDAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|114320376|ref|YP_742059.1| signal-transduction protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114226770|gb|ABI56569.1| putative signal-transduction protein with CBS domains
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 145

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/108 (30%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNTLSVEDVM 289
           V    P+ +AI  +++   GCV V+ E   L+GI TE D+  R  H  KD     V +VM
Sbjct: 19  VDADVPVAEAIKTMADGHVGCVLVM-EKGSLRGIFTERDVMIRVVHDGKDPAQTPVSEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +   V+     +  AM +  +  +  L V D      G+V   DL+R
Sbjct: 78  TREVAVVPPTMTVEEAMVVCLERRVRHLPVYDGSD-LEGVVSSGDLMR 124



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 43/114 (37%), Gaps = 8/114 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN-FSEND--FYVLHPGGKLGTLFVCASDVMHSGDS 229
           +A     +    +G  L +     R  F+E D    V+H G                   
Sbjct: 25  VAEAIKTMADGHVGCVLVMEKGSLRGIFTERDVMIRVVHDGKDPAQT----PVSEVMTRE 80

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           + +V     + +A+ +  E+R   + V D G  L+G+++ GD+ R    D   +
Sbjct: 81  VAVVPPTMTVEEAMVVCLERRVRHLPVYD-GSDLEGVVSSGDLMRWVIGDQKHM 133


>gi|296136218|ref|YP_003643460.1| inosine-5'-monophosphate dehydrogenase [Thiomonas intermedia K12]
 gi|294340453|emb|CAZ88834.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Thiomonas sp. 3As]
 gi|295796340|gb|ADG31130.1| inosine-5'-monophosphate dehydrogenase [Thiomonas intermedia K12]
          Length = 491

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 64/170 (37%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +F       ++  +    S V+      
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIGIIHKNFTAKAQATEVARVKRFESGVLR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D + +  +       V+ E  K+ GI+T  D+   F   L+T  V DVM 
Sbjct: 97  ITISPIVKVRDVMQLSRQHGISGFPVI-ENGKVVGIVTNRDLR--FETRLDT-PVRDVMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E   L  A  L+ QH +  ++VV+   +  G++   D+ + 
Sbjct: 153 PRERLVTVPEGAPLEQAKALMHQHRLERVLVVNAEFELRGLMTVKDIQKA 202



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             DVM   + +  V  G PL  A  ++ + R   V VV+   +L+G++T  DI +   +
Sbjct: 147 VRDVMTPRERLVTVPEGAPLEQAKALMHQHRLERVLVVNAEFELRGLMTVKDIQKATER 205


>gi|82750276|ref|YP_416017.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus RF122]
 gi|82655807|emb|CAI80209.1| probable 6-phospho-3-hexuloisomerase [Staphylococcus aureus RF122]
          Length = 182

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +    G A P  S   Q +    D++ + L+   N SE      H
Sbjct: 125 TNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|224827002|ref|ZP_03700100.1| putative signal transduction protein with CBS domains [Lutiella
           nitroferrum 2002]
 gi|224600835|gb|EEG07020.1| putative signal transduction protein with CBS domains [Lutiella
           nitroferrum 2002]
          Length = 151

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
                  +  V     +  A+ +++E+  G V V+     + GI +E D  R      + 
Sbjct: 9   DSKPNRQLIFVSPDATVFQALQVMAEQNVGAVLVM-HACDVHGIFSERDYARRVVLQGRT 67

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V ++M      +  +  +   M L+ +  I  L V++ C+  +G+V   DL+  
Sbjct: 68  SAGTHVREIMTSRVVYVTPEQTVDECMALMTEKRIRHLPVMEGCE-VLGVVSIGDLVHA 125



 Score = 39.5 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 17/97 (17%), Positives = 38/97 (39%), Gaps = 4/97 (4%)

Query: 180 IMQLAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP 238
           + +  +G  L +   +    FSE D+         G               +  V     
Sbjct: 32  MAEQNVGAVLVMHACDVHGIFSERDYARR--VVLQGRTSAGTHVREIMTSRVVYVTPEQT 89

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           + + + +++EKR   + V+ EG ++ G+++ GD+   
Sbjct: 90  VDECMALMTEKRIRHLPVM-EGCEVLGVVSIGDLVHA 125


>gi|289626325|ref|ZP_06459279.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
           str. NCPPB3681]
 gi|330868293|gb|EGH03002.1| CBS domain-containing protein [Pseudomonas syringae pv. aesculi
           str. 0893_23]
          Length = 146

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 52/118 (44%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     ++DA+ +++EK  G + VV EG  + G+++E D  R      +    
Sbjct: 14  QNQQVHTIGPDQMVLDALRLMAEKNIGALPVV-EGNVMVGVVSERDYARKVILKGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M      +     +   M ++   ++  L VV +  + +G++   DL++  I
Sbjct: 73  TPVREIMSNKVITVDSQQSVEACMGIMTDSHLRHLPVV-EDGQLLGLLSIGDLVKEAI 129



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L ++D+  +    I  D ++  A++L+ + NI  L VV +    +G+V   D  R  I+
Sbjct: 8   LKLKDLQNQQVHTIGPDQMVLDALRLMAEKNIGALPVV-EGNVMVGVVSERDYARKVIL 65


>gi|257870226|ref|ZP_05649879.1| acetoin utilization protein [Enterococcus gallinarum EG2]
 gi|257804390|gb|EEV33212.1| acetoin utilization protein [Enterococcus gallinarum EG2]
          Length = 215

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/125 (28%), Positives = 58/125 (46%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              ++  V    P+ DAI ++ +     + VVD  Q+L G+ITEG I             
Sbjct: 7   MTKNVITVHSAMPIFDAIDLMKKHDIHRLPVVD-QQRLVGLITEGTIAEAMPSKATSLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 LN  +V D+M+K    I  + LL  A+ ++R+ N+ VL V+ D +  +GI+   
Sbjct: 66  YEMNYLLNKTTVADIMLKKVTTIKPEALLEDAIAVMREENVGVLPVLADDE-LVGIITNN 124

Query: 334 DLLRF 338
           D+   
Sbjct: 125 DIFDA 129



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV D M KN   +     +  A+ L+++H+I  L VVD  Q+ +G++ 
Sbjct: 1   MSVRDFMTKNVITVHSAMPIFDAIDLMKKHDIHRLPVVD-QQRLVGLIT 48



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  +K    L DAI ++ E+  G + V+ + + L GIIT  DIF  F K
Sbjct: 81  MLKKVTTIKPEALLEDAIAVMREENVGVLPVLADDE-LVGIITNNDIFDAFLK 132


>gi|46199003|ref|YP_004670.1| Mg(2+) transporter mgtE [Thermus thermophilus HB27]
 gi|46196627|gb|AAS81043.1| Mg(2+) transporter mgtE [Thermus thermophilus HB27]
          Length = 450

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 72/199 (36%), Gaps = 19/199 (9%)

Query: 153 ACHADIVLTLPKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVL--- 207
           A  A+++  L  E ++      P      I++    D LA AL   R      F  L   
Sbjct: 55  AKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDL 114

Query: 208 -----HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVV 257
                    +    +               V+ G  + + +  L            + VV
Sbjct: 115 LDPRTRAEVEALARYEEDEAGGLMTPEYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVV 174

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +LKG+++  D+     +      V +++      +  DT      +L+  ++ +VL
Sbjct: 175 DEKGRLKGVLSLRDLIVADPR----TRVAEILNPKVVYVRTDTDQEEVARLMADYDFTVL 230

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD+  + +GIV   D+L
Sbjct: 231 PVVDEEGRLVGIVTVDDVL 249



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLNTLSVEDV 288
           V+      +   ++++  F  + VVDE  +L GI+T  D+         +D++ L   DV
Sbjct: 209 VRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGAVDV 268


>gi|302392437|ref|YP_003828257.1| polynucleotide adenylyltransferase region [Acetohalobium arabaticum
           DSM 5501]
 gi|302204514|gb|ADL13192.1| Polynucleotide adenylyltransferase region [Acetohalobium arabaticum
           DSM 5501]
          Length = 888

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 1/112 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A   +       + V  E + L G+I+  D+ +    DL    V
Sbjct: 320 MSSPVQTITPDKSMEEAEEKMLCYGHSGLIVT-EDEDLVGVISRRDVDKVKQHDLMHAPV 378

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M +    I EDT      Q L +++I  L V++   + +GIV   D+LR
Sbjct: 379 KGYMSRQVVTIREDTTFKDIQQKLVEYDIGRLPVLNRNNELVGIVTRSDVLR 430



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF--------LDLL 336
             D+M    + I  D  +  A + +  +  S L+V +D    +G++           DL+
Sbjct: 316 AGDIMSSPVQTITPDKSMEEAEEKMLCYGHSGLIVTEDED-LVGVISRRDVDKVKQHDLM 374

Query: 337 RF 338
             
Sbjct: 375 HA 376



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 23/59 (38%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + A    +    +  ++      D    L E   G + V++   +L GI+T  D+ R  
Sbjct: 374 MHAPVKGYMSRQVVTIREDTTFKDIQQKLVEYDIGRLPVLNRNNELVGIVTRSDVLRVL 432


>gi|220922314|ref|YP_002497616.1| CBS domain containing membrane protein [Methylobacterium nodulans
           ORS 2060]
 gi|219946921|gb|ACL57313.1| CBS domain containing membrane protein [Methylobacterium nodulans
           ORS 2060]
          Length = 247

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 27/130 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V+    +  AI ++ EKR   + V+D    + GI++EGD+                    
Sbjct: 14  VRADLSVELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLLARPELGTARPKPGWVQYLI 73

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                   + ++     V DVM +       +T L   + L+ +  I  + +V +  + +
Sbjct: 74  SPGRLAEAYARE-RGRRVGDVMTREVVTASPETPLDEIVDLMTRRRIKRVPIV-EGGRLV 131

Query: 328 GIVHFLDLLR 337
           G+V   DLLR
Sbjct: 132 GLVTRADLLR 141



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M K    +  D  + +A+ L+ +  IS L V+D     +GIV   DLL
Sbjct: 1   MRARDIMTKEVTSVRADLSVELAIALMLEKRISGLPVLDPDCAVVGIVSEGDLL 54



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           PG             +    +  +V      PL + + +++ +R   V +V EG +L G+
Sbjct: 75  PGRLAEAYARERGRRVGDVMTREVVTASPETPLDEIVDLMTRRRIKRVPIV-EGGRLVGL 133

Query: 267 ITEGDIFRNFHKDLNTL 283
           +T  D+ R+  + L   
Sbjct: 134 VTRADLLRSLRRALQEA 150


>gi|91793317|ref|YP_562968.1| CBS domain-containing protein [Shewanella denitrificans OS217]
 gi|91715319|gb|ABE55245.1| CBS domain protein [Shewanella denitrificans OS217]
          Length = 136

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 13/132 (9%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +           +  V +   L  A  I    +F  + V+DE  +L+G+++  D+ R   
Sbjct: 1   MNVLVSQIMSRRVVTVDMDDRLQVAKDIFDNVKFNHLLVIDEDNQLQGVLSHRDLVRALS 60

Query: 278 KDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            +L T              V  VM  +P  +  D  +  A QL+ +H I  L V+ +   
Sbjct: 61  PNLGTAAEFVRDTDTLQKRVHQVMSHDPITVAPDIDIKQASQLILKHGIGCLPVL-ENNI 119

Query: 326 AIGIVHFLDLLR 337
            +GI+ + DLLR
Sbjct: 120 ILGIITWKDLLR 131



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  +M +    +  D  L VA  +      + L+V+D+  +  G++   DL+R 
Sbjct: 5   VSQIMSRRVVTVDMDDRLQVAKDIFDNVKFNHLLVIDEDNQLQGVLSHRDLVRA 58



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                        V     +  A  ++ +   GC+ V+ E   + GIIT  D+ R+F +
Sbjct: 78  KRVHQVMSHDPITVAPDIDIKQASQLILKHGIGCLPVL-ENNIILGIITWKDLLRSFSQ 135


>gi|283850871|ref|ZP_06368157.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
 gi|283573794|gb|EFC21768.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
          Length = 830

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
                + +A+  ++++   C+ +V    +  GIITE D+ R   +   L  L + D+M  
Sbjct: 148 PGNITVREAVRRMADRSISCL-IVARDARPAGIITERDVVRLLAESPHLGRLKLYDIMSC 206

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +  D  +  A  ++++  +  L+VVDD ++ +G+V   D++R
Sbjct: 207 PVVCVEADRPVFEAAMVMKKRRMRRLVVVDDDRRVLGVVTQSDIVR 252



 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V     + + + ++  +   C+ +V E     GIITE +I        +D     V D+M
Sbjct: 17  VSPAVSVREGLDVMRRRSISCL-IVAEAGLPVGIITERNILWAAAHRGEDFADRPVADLM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFG 339
                 + EDT+L  A  LL +  +  L++VD   +A G++   DL+ R G
Sbjct: 76  SAPVVTVAEDTMLVEAYHLLAKKRLRHLVMVDAAGQARGVLTQSDLIERLG 126



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
               +  V     L++A  +L++KR   + +VD   + +G++T+ D+      D  +   
Sbjct: 75  MSAPVVTVAEDTMLVEAYHLLAKKRLRHLVMVDAAGQARGVLTQSDLIERLGHDSLSEIK 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V  +M +       +  +  A++ +   +IS L+V  D  +  GI+   D++R 
Sbjct: 135 RVSVIMTREVVTAPGNITVREAVRRMADRSISCLIVARDA-RPAGIITERDVVRL 188



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 28/49 (57%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  V+   P+ +A  ++ ++R   + VVD+ +++ G++T+ DI R   
Sbjct: 207 PVVCVEADRPVFEAAMVMKKRRMRRLVVVDDDRRVLGVVTQSDIVRGLE 255



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 8/57 (14%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + +++  +   +     +   + ++R+ +IS L+V  +    +GI+   ++L
Sbjct: 1   MGDRRLAEIVSPDVIAVSPAVSVREGLDVMRRRSISCLIVA-EAGLPVGIITERNIL 56


>gi|156937448|ref|YP_001435244.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566432|gb|ABU81837.1| putative signal-transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 131

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 8/126 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK---GIITEGDIF 273
                        I  +     + +A+ ++ E   G + V  E +      G++TE D+ 
Sbjct: 1   MSSIEKYFGRERMIITIDEEATIGEAVELMHENGIGALLVTREEEGGVAAAGLLTERDVI 60

Query: 274 RNFH--KDLNTLSVEDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                  D N   V+  M   K+   +  +T +  A++++ ++ I  L+VV   +K +GI
Sbjct: 61  AALALGADPNRAKVKYYMTPWKDVITVTPETPIKEALRIMIENGIRHLVVV-SGEKVLGI 119

Query: 330 VHFLDL 335
           +   DL
Sbjct: 120 ISMRDL 125


>gi|288553438|ref|YP_003425373.1| polyA polymerase family protein [Bacillus pseudofirmus OF4]
 gi|288544598|gb|ADC48481.1| polyA polymerase family protein [Bacillus pseudofirmus OF4]
          Length = 845

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 21/123 (17%), Positives = 47/123 (38%), Gaps = 1/123 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +    S        +  +     + DA  ++         VV++ ++L GII+  D+ 
Sbjct: 302 MIVEHTVSAKEVMSYPVKTIHENDTITDAKEMMIRFGHTGFPVVNDHEELVGIISRRDVD 361

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +  H       ++  M +       D+ +    Q +  HNI  + ++DD     GI+   
Sbjct: 362 KAIHHQYGHAPIKGYMTREIVTKQVDSTIDEVQQAMISHNIGRIPIMDDQN-IAGIISRT 420

Query: 334 DLL 336
           +++
Sbjct: 421 NII 423



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 33/58 (56%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +T+S ++VM    K I E+  +T A +++ +   +   VV+D ++ +GI+   D+ + 
Sbjct: 306 HTVSAKEVMSYPVKTIHENDTITDAKEMMIRFGHTGFPVVNDHEELVGIISRRDVDKA 363


>gi|114766557|ref|ZP_01445514.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114541247|gb|EAU44298.1| CBS domain protein [Roseovarius sp. HTCC2601]
          Length = 173

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 51/120 (42%), Gaps = 4/120 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +   GD +  ++    +  A+ +L +KR G + V D    L GI++E DI R     
Sbjct: 35  RHVLDDKGDEVVWIQPQETIGKAVEVLRDKRIGAILVKDPQGALVGILSERDIVRRLADT 94

Query: 280 LNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   VE++M    +    D  L V ++ +       + V+++    +G++   D++
Sbjct: 95  PGRTLPQRVEELMTPEVETCSPDESLVVVLRRMNDGRFRHMPVMEE-GTLVGLISIGDVV 153



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I     +  A+++LR   I  ++V D     +GI+   D++R
Sbjct: 46  VWIQPQETIGKAVEVLRDKRIGAILVKDPQGALVGILSERDIVR 89


>gi|288960074|ref|YP_003450414.1| hypothetical protein AZL_a03390 [Azospirillum sp. B510]
 gi|288912382|dbj|BAI73870.1| hypothetical protein AZL_a03390 [Azospirillum sp. B510]
          Length = 156

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 56/128 (43%), Gaps = 9/128 (7%)

Query: 218 VCASDVMHSGDSIP-LVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDI 272
           +   D++    +   +V+I   +  A+ ++  +  G + V D    EG  + G+I+E D+
Sbjct: 1   MKVEDILRKKGTRIGMVRINETVTTALRLMKAENTGALVVKDVCRTEGNTVVGVISERDV 60

Query: 273 FRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R        +    V  +M ++P        +   + L+ QH I  + V+ +    +G+
Sbjct: 61  VRALVDRGPGILDQPVSALMTRDPYCCNPSDTVRHVLSLMDQHGIRHVPVL-EGSTLVGV 119

Query: 330 VHFLDLLR 337
           V   DL+R
Sbjct: 120 VSVRDLIR 127


>gi|227829872|ref|YP_002831651.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|284997029|ref|YP_003418796.1| hypothetical protein LD85_0697 [Sulfolobus islandicus L.D.8.5]
 gi|227456319|gb|ACP35006.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|284444924|gb|ADB86426.1| hypothetical protein LD85_0697 [Sulfolobus islandicus L.D.8.5]
          Length = 129

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 52/105 (49%), Gaps = 1/105 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     + DA+ ++ +       VV++  ++ GI+T+  I R    + N    + D+MIK
Sbjct: 15  INYNYKIKDALELMRKGNTNFPLVVNDKNEIVGIVTQRVITRALGGNANLDTKIADIMIK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  +  L     L+ ++N++ L+V D   KA+G+V   D+L
Sbjct: 75  TVITVSGNEELLDVFILMAKNNVNHLVVTDPKGKAVGVVSLRDVL 119



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++P  I  +  +  A++L+R+ N +  +VV+D  + +GIV    + R 
Sbjct: 9   SRDPLTINYNYKIKDALELMRKGNTNFPLVVNDKNEIVGIVTQRVITRA 57


>gi|161502408|ref|YP_001569520.1| hypothetical protein SARI_00442 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|263504714|sp|A9MIE1|MURR_SALAR RecName: Full=HTH-type transcriptional regulator murR; AltName:
           Full=MurPQ operon repressor
 gi|160863755|gb|ABX20378.1| hypothetical protein SARI_00442 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 287

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           S+    +++   R +  EK  + +LE +       +    +  I      + ITG+G S 
Sbjct: 91  SITSEDSLEMMARKLNREK--IVALEETYNLMDYERLEQVINLISKAP-LIQITGVGGSA 147

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            +G  L+  L   G                  + + D+ I +S+SGS  E+      AR+
Sbjct: 148 LVGRDLSFKLMKIGFRVACEVDTHVQATIAQALRQGDVQIAISYSGSKKEIVLCAEAARK 207

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
               +IAITS   S +   AD  L             +  ++   Q ++ D L + +++
Sbjct: 208 QGATVIAITSLADSPLRRLADYTLDTVSGETEWR--SSSMSTRTAQNSVTDLLFVGMVQ 264


>gi|315427276|dbj|BAJ48888.1| CBS-domain-containing protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 196

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 50/118 (42%), Gaps = 7/118 (5%)

Query: 225 HSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
               S P+V+       ++   ++     G V V+    K  GIIT+ D+         D
Sbjct: 14  RDVMSSPVVEADAEASAVEVAELMRRYGIGSV-VISSQGKPVGIITKTDLVTKVVANGTD 72

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            NT+   D+M    + +  D  +  A+  + +  +S L+VV    +  GIV   D+L+
Sbjct: 73  PNTVRARDIMTTPLQTVEPDVTIDDALSKMNKLKLSRLVVVYKE-RLAGIVTIKDILQ 129



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L V DVM         +       +L+R++ I   +V+    K +GI+   DL+
Sbjct: 8   VEELRVRDVMSSPVVEADAEASAVEVAELMRRYGIGS-VVISSQGKPVGIITKTDLV 63



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 1/65 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                GT              +  V+    + DA++ +++ +   + VV   ++L GI+T
Sbjct: 65  KVVANGTDPNTVRARDIMTTPLQTVEPDVTIDDALSKMNKLKLSRLVVV-YKERLAGIVT 123

Query: 269 EGDIF 273
             DI 
Sbjct: 124 IKDIL 128


>gi|300865279|ref|ZP_07110093.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
 gi|300336752|emb|CBN55243.1| Sensor protein (modular protein) [Oscillatoria sp. PCC 6506]
          Length = 714

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVM 289
           L+  G P+ +AI  +S  R     +V E  KL GI TE D+ +       L  +++  VM
Sbjct: 22  LIAPGVPVTEAIAAMSYSRASYTLIV-EKNKLMGIFTERDVVKLTASKTPLEGVAISQVM 80

Query: 290 IKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +N   I   E   +   + L R   I  L +VD+    IG+V 
Sbjct: 81  TQNLITIAFLEAGDIYSVLALFRSSKIRHLPIVDEQGYPIGVVT 124



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQ-----------KLKGIITEGDIFR--NFHKDL 280
                + +    ++  R  CV +                K  GIITE D+ +      D+
Sbjct: 155 PANASVFEVAQQMATNRKSCVVICQSCGYSEAIANGKPLKPIGIITEKDLVKFTATGLDI 214

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  E +M      +  +T L    +++++H I  L+VVD     +GIV    LL
Sbjct: 215 AQIPAEKLMSSPLLPVQLNTNLWQTHEMMQKHEIRRLVVVDTDGYLVGIVTQSTLL 270



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 13/113 (11%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMIKNPKVI 296
           +   + +    +   + +VDE     G++T   + +     DL  +  V ++M       
Sbjct: 95  IYSVLALFRSSKIRHLPIVDEQGYPIGVVTPDSLRQVLKPTDLLQMGRVGEIMTTAVITA 154

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQ-----------KAIGIVHFLDLLRF 338
             +  +    Q +  +  S +++   C            K IGI+   DL++F
Sbjct: 155 PANASVFEVAQQMATNRKSCVVICQSCGYSEAIANGKPLKPIGIITEKDLVKF 207


>gi|254380667|ref|ZP_04996033.1| CBS domain containing protein [Streptomyces sp. Mg1]
 gi|194339578|gb|EDX20544.1| CBS domain containing protein [Streptomyces sp. Mg1]
          Length = 139

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
             +    V+    L+DA   +SE   G + +     +L GIIT+ DI        KD + 
Sbjct: 8   MHEGASCVREEETLMDAARRMSELGVGALPICGPDDRLHGIITDRDIVIKCLAKGKDPHH 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++   +    P  +         +Q++++H +  L V+ +  + +G++   DL R
Sbjct: 68  MTAGMLAEGKPLTVAAGADSGQVLQIMQEHRVRRLPVI-EDHRLVGMISEADLAR 121



 Score = 42.6 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 23/54 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  ++M +    + E+  L  A + + +  +  L +     +  GI+   D++
Sbjct: 2   TTAREIMHEGASCVREEETLMDAARRMSELGVGALPICGPDDRLHGIITDRDIV 55


>gi|114328016|ref|YP_745173.1| CBS domain-containing protein [Granulibacter bethesdensis CGDNIH1]
 gi|114316190|gb|ABI62250.1| CBS domain containing protein [Granulibacter bethesdensis CGDNIH1]
          Length = 144

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           + + G ++  V           +LS+KR G V V+    +++GI++E D+ R        
Sbjct: 7   LKNKGHAVETVGAKAEFAAIAVLLSDKRIGAVPVLGAEGEIRGIVSERDLVRAMANYGVK 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              L+ E +M +  +    +  +  AM+ +       L VV++  + IGIV   D++   
Sbjct: 67  ALELTAEQMMTRGIRTASAEMTVEAAMETMTTGRFRHLPVVEE-GRLIGIVSIGDVVAAR 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|53717049|ref|YP_105844.1| HPP family protein [Burkholderia mallei ATCC 23344]
 gi|67640319|ref|ZP_00439130.1| membrane protein, HPP family/CBS domain [Burkholderia mallei GB8
           horse 4]
 gi|126447907|ref|YP_001078328.1| HPP family/CBS domain-containing protein [Burkholderia mallei NCTC
           10247]
 gi|251768042|ref|ZP_02269306.2| membrane protein, HPP family/CBS domain [Burkholderia mallei
           PRL-20]
 gi|254174277|ref|ZP_04880939.1| membrane protein, HPP family/CBS domain [Burkholderia mallei ATCC
           10399]
 gi|254183499|ref|ZP_04890091.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1655]
 gi|254190125|ref|ZP_04896634.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254356873|ref|ZP_04973148.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           2002721280]
 gi|52423019|gb|AAU46589.1| HPP family protein [Burkholderia mallei ATCC 23344]
 gi|126240761|gb|ABO03873.1| membrane protein, HPP family/CBS domain protein [Burkholderia
           mallei NCTC 10247]
 gi|148025900|gb|EDK84023.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           2002721280]
 gi|157937802|gb|EDO93472.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160695323|gb|EDP85293.1| membrane protein, HPP family/CBS domain [Burkholderia mallei ATCC
           10399]
 gi|184214032|gb|EDU11075.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1655]
 gi|238521017|gb|EEP84472.1| membrane protein, HPP family/CBS domain [Burkholderia mallei GB8
           horse 4]
 gi|243060961|gb|EES43147.1| membrane protein, HPP family/CBS domain [Burkholderia mallei
           PRL-20]
          Length = 382

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 167 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 218

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 219 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 277

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 278 RVVGIVTRADLSKA 291



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 249 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 308

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 309 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 368

Query: 336 LRFGI 340
           +  G+
Sbjct: 369 I-AGL 372


>gi|71736791|ref|YP_276840.1| nucleotidyltransferase [Pseudomonas syringae pv. phaseolicola
           1448A]
 gi|71557344|gb|AAZ36555.1| nucleotidyltransferase, putative [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 622

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 161 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 220

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 221 PVRRTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 271



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 154 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 210


>gi|21226577|ref|NP_632499.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
           mazei Go1]
 gi|20904852|gb|AAM30171.1| putative inosine-5'-monophosphate dehydrogenase [Methanosarcina
           mazei Go1]
          Length = 169

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 53/144 (36%), Gaps = 35/144 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +   K    + +A  IL E       V+ E  KL GI++E D+             
Sbjct: 22  MNPDVVFCKPENTVREAAKILKENNISGAPVL-EDGKLVGIVSEADLLELLVIPEKGNLW 80

Query: 274 ---------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                                +    D+ +  +E++M K+   I  +  +  A +L+ +H
Sbjct: 81  LPSPFEIIEVPIRELLSWEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRH 140

Query: 313 NISVLMVVDDCQKAIGIVHFLDLL 336
            I+ L V+ +    +GIV   D++
Sbjct: 141 RINRLPVI-ENGYVVGIVTRGDII 163



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + V+DVM  +      +  +  A ++L+++NIS   V+ +  K +GIV   DLL   +I
Sbjct: 16  MKVKDVMNPDVVFCKPENTVREAAKILKENNISGAPVL-EDGKLVGIVSEADLLELLVI 73



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                K+ +             S+  +     + +A  ++   R   + V+ E   + GI
Sbjct: 98  WEETKKMLSDVGSTKLEEMMTKSVHTISSEASVEEASELMVRHRINRLPVI-ENGYVVGI 156

Query: 267 ITEGDIFRNFHK 278
           +T GDI     K
Sbjct: 157 VTRGDIIEGLAK 168


>gi|322385954|ref|ZP_08059594.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
 gi|321269937|gb|EFX52857.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
          Length = 218

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ +++   + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADIMRDQKLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI +   I +   L  A  L+ ++ I +L VVD+ Q   GI+   D+ + 
Sbjct: 73  NKTKVKDVMIHDVVTISQYASLEDATYLMLKNKIGILPVVDNEQ-VYGIITDRDIFKA 129



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R   +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADIMRDQKLHRLPVIEND-KLVGLVT 48



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  +     L DA  ++ + + G + VVD  +++ GIIT+ DIF+ F
Sbjct: 81  MIHDVVTISQYASLEDATYLMLKNKIGILPVVD-NEQVYGIITDRDIFKAF 130


>gi|311694942|gb|ADP97815.1| inositol-5-monophosphate dehydrogenase [marine bacterium HP15]
          Length = 487

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 65/171 (38%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       LAIA+ +         +  V      +  +    S V+      
Sbjct: 41  NIPLLSSAMDTVTEAELAIAMAQEGGIGIMHKNMTVEQQAAAVRKVKKFESGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + + I        + VVD G  L GI+T  DI   F   ++TL V D+M 
Sbjct: 98  ITVSPETTVRELVDITMANSISGLPVVD-GHDLIGIVTGRDIR--FESRMDTL-VRDIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E   L    +LL +H I  ++VV+D  +  G++   D+ +  
Sbjct: 154 PKEKLVTVKEGACLEEVKELLHRHRIEKVLVVNDNFELRGLITVKDIQKAK 204


>gi|134283429|ref|ZP_01770129.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           305]
 gi|167906379|ref|ZP_02493584.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           NCTC 13177]
 gi|134245178|gb|EBA45272.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           305]
          Length = 382

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 167 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 218

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 219 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 277

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 278 RVVGIVTRADLSKA 291



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 249 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 308

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 309 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 368

Query: 336 LRFGI 340
           +  G+
Sbjct: 369 I-AGL 372


>gi|229074433|ref|ZP_04207462.1| CBS domain protein [Bacillus cereus Rock4-18]
 gi|228708553|gb|EEL60697.1| CBS domain protein [Bacillus cereus Rock4-18]
          Length = 139

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + V+ E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVL-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-EDGQLVGMLALGDL 117



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ ++ ++ V+++ Q  +G+V   DL+  GI
Sbjct: 2   TQVRDFMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVLENEQ-VVGLVTDRDLVVRGI 58


>gi|163735658|ref|ZP_02143089.1| hypothetical protein RLO149_00285 [Roseobacter litoralis Och 149]
 gi|161391086|gb|EDQ15424.1| hypothetical protein RLO149_00285 [Roseobacter litoralis Och 149]
          Length = 231

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     + DA+ ++ +     + VVD    LKG+++EGD+ R                  
Sbjct: 14  VPQDGKIEDAVRLMLDHHVSALPVVDVDGALKGLVSEGDLMRRVRDTDGPRRSWWLELLS 73

Query: 279 ----------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                      LN+  + DVM ++   + ED  +    +LL +H I  + V+ +    +G
Sbjct: 74  GSGNSAQEFVKLNSHHIADVMTRDVVSVEEDAPVAEIARLLEKHRIKRVPVLRE-GPVVG 132

Query: 329 IVHFLDLLRF 338
           IV   +LL  
Sbjct: 133 IVSRANLLHA 142



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +D+M  +   + +D  +  A++L+  H++S L VVD      G+V   DL+R
Sbjct: 1   MQAKDIMTTSVISVPQDGKIEDAVRLMLDHHVSALPVVDVDGALKGLVSEGDLMR 55


>gi|298489202|ref|ZP_07007221.1| predicted signal-transduction protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298156284|gb|EFH97385.1| predicted signal-transduction protein [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 622

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 161 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREAVADVNADFSA 220

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 221 PVRRTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 271



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 154 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDEQQAPLGIFTLRDLREA 210


>gi|289550084|ref|YP_003470988.1| Transcriptional regulator, RpiR family [Staphylococcus lugdunensis
           HKU09-01]
 gi|315659284|ref|ZP_07912148.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus lugdunensis M23590]
 gi|289179616|gb|ADC86861.1| Transcriptional regulator, RpiR family [Staphylococcus lugdunensis
           HKU09-01]
 gi|315495709|gb|EFU84040.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus lugdunensis M23590]
          Length = 290

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K        ++ N +V      +   +R  +++  S Q    +      +++K  K  + 
Sbjct: 77  KQSLPYNIEILANDSVDKIKNKL--HQRAANAINKSTQAIKPYAIDQMCKQLKRAKT-IY 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G G S      +    +  G     V         L   ++ D I+ ++ +G   EL+
Sbjct: 134 VFGYGASYVCALDIYQKFSRIGLNVQVVQETHMLTTQLSTHSQSDCILFITNNGDQSELQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           A++   + + IP++ +TS   + VA  +++VL      +     +  TTS   Q+   D 
Sbjct: 194 ALVKVIKDYHIPIMTVTSHKHNPVAQASEVVLVYG-NSDENELRMGATTSLFAQMYTIDT 252

Query: 189 LAIALLESRNFSENDF 204
           L    +        DF
Sbjct: 253 LFYRYIALNYQDSLDF 268


>gi|298501431|ref|YP_003723428.1| Cl- channel voltage-gated family protein ['Nostoc azollae' 0708]
 gi|298235171|gb|ADI66305.1| Cl- channel voltage-gated family protein ['Nostoc azollae' 0708]
          Length = 863

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 3/103 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
                +A+   S        V+ E  K+ GI+T+ D+     + L+   ++ ++M   P 
Sbjct: 464 QMSTDEAVQAFSHSHHRNFPVL-ENGKVVGIVTQEDLVNIASQKLSGDTTISEIMTPEPV 522

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     L   + +L ++++S L+V  + +K IGI+   D++R
Sbjct: 523 TVTPTATLAHVLHILNRYHLSCLLVT-EGRKLIGIITRSDIIR 564


>gi|222100318|ref|YP_002534886.1| Transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
 gi|221572708|gb|ACM23520.1| Transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
          Length = 266

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 60/133 (45%), Gaps = 4/133 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  E   L  L+++L  +       AVE I + + RV+  G+G SG +    +   +  G
Sbjct: 87  IDEEIEILKRLKNTLNMK---DVEQAVEWILSAR-RVLFFGVGLSGVVSEYASLKFSLLG 142

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +FF +       +   +T +DL+I +S +G+  +       A+      IAIT+   S
Sbjct: 143 FHTFFSNDPHVQVIEAVNLTEEDLVISISHTGNIRDTVKSTQVAKDMGAKTIAITTNKDS 202

Query: 151 VVACHADIVLTLP 163
            +A  A +VL  P
Sbjct: 203 ELAKVAHLVLQSP 215


>gi|126700662|ref|YP_001089559.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile 630]
 gi|255102155|ref|ZP_05331132.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-63q42]
 gi|255308024|ref|ZP_05352195.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile ATCC 43255]
 gi|115252099|emb|CAJ69937.1| Transcriptional regulator, RpiR family [Clostridium difficile]
          Length = 283

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AVE+I   K  V I G+G S  +   L   L      +F    +         + ++D+
Sbjct: 121 EAVEQIIKAKN-VYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKEDI 179

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            I +S+SG S E+   +  A+     +I IT  + + ++  +D+ L +P   +    G  
Sbjct: 180 AIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREGAI 239

Query: 175 PTTSAIMQL 183
            +  A++ L
Sbjct: 240 SSRIAMLTL 248


>gi|73669712|ref|YP_305727.1| putative chloride channel [Methanosarcina barkeri str. Fusaro]
 gi|72396874|gb|AAZ71147.1| putative chloride channel [Methanosarcina barkeri str. Fusaro]
          Length = 590

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 57/162 (35%), Gaps = 10/162 (6%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGT-----LFVCASDVMHSGDSIPLVKIGCP 238
            + + ++ AL     F+E    +   G K+       +            S+  V     
Sbjct: 419 VLSNVMSSALYPESIFTE---GLRRRGIKIRKGREIDIMTSIPVKAAMITSVQTVSEDKS 475

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +     ++   R     VVD   KL GI+T  D+            + ++  +  +V   
Sbjct: 476 VEILEALMKASRHIGFPVVDSKGKLSGIVTLSDLRNKVKPGEVGKKIGEIATREVEVAYP 535

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           D  L  A++ L    I  L VVD     K +GI+   D++  
Sbjct: 536 DETLDTALKRLASKQIGRLPVVDREDKTKLLGIITRSDIVNA 577



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHK 278
           +      L  A+  L+ K+ G + VVD  +  KL GIIT  DI   ++K
Sbjct: 532 VAYPDETLDTALKRLASKQIGRLPVVDREDKTKLLGIITRSDIVNAYNK 580


>gi|157363265|ref|YP_001470032.1| CBS domain-containing protein [Thermotoga lettingae TMO]
 gi|157313869|gb|ABV32968.1| CBS domain containing protein [Thermotoga lettingae TMO]
          Length = 213

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 53/124 (42%), Gaps = 14/124 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  +       +A+ ++ ++    + VV +  K+ GIITE D+             
Sbjct: 7   MTTDVVTISPDASFSEAMELIRKRGVRRLPVV-KNDKVVGIITEKDLLSASPSQATTLDV 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L ++ +M K+   +  +T +  A +++    I  L+V+++  + +GIV   
Sbjct: 66  WELTSLLGKLKIKQIMKKDVIHVHPNTPIEEAARIMTDKKIGSLIVLENE-RMVGIVTET 124

Query: 334 DLLR 337
           D+ +
Sbjct: 125 DIFK 128



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM  +   I  D   + AM+L+R+  +  L VV    K +GI+   DLL  
Sbjct: 3   VRDVMTTDVVTISPDASFSEAMELIRKRGVRRLPVV-KNDKVVGIITEKDLLSA 55



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    P+ +A  I+++K+ G + V+ E +++ GI+TE DIF+ F
Sbjct: 81  MKKDVIHVHPNTPIEEAARIMTDKKIGSLIVL-ENERMVGIVTETDIFKVF 130


>gi|92117469|ref|YP_577198.1| CBS domain-containing protein [Nitrobacter hamburgensis X14]
 gi|91800363|gb|ABE62738.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
           X14]
          Length = 228

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 47/128 (36%), Gaps = 24/128 (18%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--------------------- 273
               + D    +  +R   V +VD+  KL GI+TE D+                      
Sbjct: 16  EDATVQDVAKTMIARRISAVPIVDKAGKLVGIVTEADLIHRIEVGTERPYSWWLHMLSGD 75

Query: 274 RNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R   +     +   + D+M +  K    +T L    +L   + I  + +V+     IGIV
Sbjct: 76  RTMAEGYVKSHARKITDIMTREVKTADPETPLIDIAELFETNGIKRVPIVNQAGDLIGIV 135

Query: 331 HFLDLLRF 338
              ++++ 
Sbjct: 136 SRANIIQA 143



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM+       ED  +    + +    IS + +VD   K +GIV   DL+
Sbjct: 1   MKARDVMVSPVIAAGEDATVQDVAKTMIARRISAVPIVDKAGKLVGIVTEADLI 54


>gi|13620170|emb|CAC36391.1| hypothetical protein [Capsella rubella]
          Length = 780

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/142 (26%), Positives = 53/142 (37%), Gaps = 23/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL +    C+ VVDE   L GI+T GDI 
Sbjct: 608 ETILEDLKVLRVMSKNYVKVSPGMTLREARNILKDSHQNCLMVVDEDDFLAGILTHGDIR 667

Query: 274 RNFHK------DLNTLSVEDVMIKN---------PKVILEDTLLTVAMQLLRQHNISVLM 318
           R          D NT  V  V  KN               D  + VA +L+    +  L 
Sbjct: 668 RYLSNNVSTILDENTCQVSSVCTKNIIYRGQERGLLTCYPDATVGVAKELMEARGVKQLP 727

Query: 319 VVD--------DCQKAIGIVHF 332
           VV           +K +G++H+
Sbjct: 728 VVKRGEVIHKGKRRKLLGLLHY 749



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +     L  A  +L+  + + LMVVD+     GI+   D+ R+
Sbjct: 611 LEDLKVLRVMSKNYVKVSPGMTLREARNILKDSHQNCLMVVDEDDFLAGILTHGDIRRY 669


>gi|299533325|ref|ZP_07046709.1| putative signal-transduction protein with CBS [Comamonas
           testosteroni S44]
 gi|298718855|gb|EFI59828.1| putative signal-transduction protein with CBS [Comamonas
           testosteroni S44]
          Length = 151

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 59/127 (46%), Gaps = 6/127 (4%)

Query: 217 FVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               ++++ +  +  +  V     ++ A+ +++EK  G + V+ EG  + GI+TE D  R
Sbjct: 1   MTTVAEILRAKGNSTIYSVSPSDTMLAALQLMAEKSIGALLVL-EGGDIAGIVTERDYAR 59

Query: 275 NFH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +   +  V++VM +    +L        M L+  + +  L V+ + ++  G++ 
Sbjct: 60  KIALQGRSSASTRVDEVMTRKVHCVLPRQTSEECMSLMTSNRMRHLPVISETRELQGLIS 119

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 120 IGDIVKE 126



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 13/77 (16%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E D+         G               +  V       + +++++  R   + V+ E
Sbjct: 53  TERDYA--RKIALQGRSSASTRVDEVMTRKVHCVLPRQTSEECMSLMTSNRMRHLPVISE 110

Query: 260 GQKLKGIITEGDIFRNF 276
            ++L+G+I+ GDI +  
Sbjct: 111 TRELQGLISIGDIVKEI 127


>gi|261405323|ref|YP_003241564.1| RpiR family transcriptional regulator [Paenibacillus sp. Y412MC10]
 gi|261281786|gb|ACX63757.1| transcriptional regulator, RpiR family [Paenibacillus sp. Y412MC10]
          Length = 291

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 64/178 (35%), Gaps = 9/178 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L+S+  + +     Q   AV+ +   K R+ + G+  S  +       L   G 
Sbjct: 104 AIESNHLTSIRDTTELLDLGQLERAVDALCRAK-RIDLYGVATSSIVAQDFYQKLIRIGK 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                  +         +T  D+ + +S+SG + E    L  A+      I+ITS   S 
Sbjct: 163 NCTAFADSHMQITSASTLTSSDVAVAVSYSGETPETIDALACAKDAGAFTISITSYRSSA 222

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           ++  ADI L      E    G     S I QL I D L + +         DF    P
Sbjct: 223 ISALADITLYSSSLEEGMRRGD--MASRIAQLHIIDILFMGMASR------DFSTYVP 272


>gi|194365447|ref|YP_002028057.1| inosine 5'-monophosphate dehydrogenase [Stenotrophomonas
           maltophilia R551-3]
 gi|194348251|gb|ACF51374.1| inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
           maltophilia R551-3]
          Length = 485

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 13/202 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
           A+T ++ S+V  H+ I+   + L            P  SA M       LAIA+ +    
Sbjct: 8   ALTYDDVSLVPAHSTILPKDVNLETRLTRDLKLKLPILSAAMDTVTEARLAIAMAQLGGM 67

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +  +     ++  +    + V+        V     + D + +        V VV
Sbjct: 68  GIIHKNLSLEQQAAEVAKVKKFEAGVIR---DPITVDPETTIRDVLALTQAHNISGVPVV 124

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
                L GI+T  D+   F  +L+   V  +M K      + E       +QLL ++ I 
Sbjct: 125 GSDGLLAGIVTHRDMR--FETELDD-PVRHIMTKKDRLITVKEGAASDEVLQLLHRNRIE 181

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            ++VV+D  +  G++   D+ +
Sbjct: 182 KVLVVNDSFELRGLITVKDIQK 203



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +M   D +  VK G    + + +L   R   V VV++  +L+G+IT  DI +N
Sbjct: 149 VRHIMTKKDRLITVKEGAASDEVLQLLHRNRIEKVLVVNDSFELRGLITVKDIQKN 204


>gi|219848518|ref|YP_002462951.1| CBS domain-containing membrane protein [Chloroflexus aggregans DSM
           9485]
 gi|219542777|gb|ACL24515.1| CBS domain containing membrane protein [Chloroflexus aggregans DSM
           9485]
          Length = 155

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + DA  +++  R   + V++    L G++TE D+     +     +V
Sbjct: 7   MTRDVICIADDASIEDAARLMARNRISGLPVINSHGMLIGLVTEHDLIAKEGR-----TV 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++M ++   +  DT +     LL    I  + VV +  K IGIV   DL+R
Sbjct: 62  KEIMTRSVISVSADTEVEQIQHLLTNQRIRRVPVV-ENGKVIGIVSRSDLVR 112



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++M ++   I +D  +  A +L+ ++ IS L V++     IG+V   DL+
Sbjct: 1   MKAREIMTRDVICIADDASIEDAARLMARNRISGLPVINSHGMLIGLVTEHDLI 54


>gi|120612024|ref|YP_971702.1| inosine-5'-monophosphate dehydrogenase [Acidovorax citrulli
           AAC00-1]
 gi|120590488|gb|ABM33928.1| inosine-5'-monophosphate dehydrogenase [Acidovorax citrulli
           AAC00-1]
          Length = 489

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +         +  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNLTAQEQAAHVAKVKRYESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  +       V D   K+ GI+T  D+      D+    V D+M 
Sbjct: 97  VVITPEHTVLQVLQLSEQLGISGFPVCDA-GKVVGIVTGRDLRFETRYDV---KVRDIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E    + A  LL +H +  L+V++D  +  G++   D+ +
Sbjct: 153 PREKLITVKEGATASEAKALLNKHKLERLLVINDAFELKGLITVKDITK 201


>gi|53722035|ref|YP_111020.1| hypothetical protein BPSS1014 [Burkholderia pseudomallei K96243]
 gi|121596764|ref|YP_989774.1| HPP family/CBS domain-containing protein [Burkholderia mallei
           SAVP1]
 gi|124382643|ref|YP_001024259.1| HPP family protein [Burkholderia mallei NCTC 10229]
 gi|254262458|ref|ZP_04953323.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1710a]
 gi|52212449|emb|CAH38475.1| putative membrane protein [Burkholderia pseudomallei K96243]
 gi|121224562|gb|ABM48093.1| membrane protein, HPP family/CBS domain [Burkholderia mallei SAVP1]
 gi|124290663|gb|ABM99932.1| membrane protein, HPP family/CBS domain protein [Burkholderia
           mallei NCTC 10229]
 gi|254213460|gb|EET02845.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           1710a]
          Length = 397

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 182 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 233

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 234 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 292

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 293 RVVGIVTRADLSKA 306



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 264 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 323

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 324 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 383

Query: 336 LRFGI 340
           +  G+
Sbjct: 384 I-AGL 387


>gi|170692167|ref|ZP_02883330.1| inosine-5'-monophosphate dehydrogenase [Burkholderia graminis
           C4D1M]
 gi|170142597|gb|EDT10762.1| inosine-5'-monophosphate dehydrogenase [Burkholderia graminis
           C4D1M]
          Length = 486

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 64/169 (37%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTAAEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +       VV EG +L GI+T  D+   F + L+   V  +M 
Sbjct: 97  ITVPPQMKVRDVIALSQQHGISGFPVV-EGSQLIGIVTNRDLR--FEERLDE-PVRSIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 153 PRERLVTVKEGTSLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|167461160|ref|ZP_02326249.1| YbbH [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 265

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 3/163 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L S+  + Q     Q   AV  +K  + ++ + G+  SG +       L   G 
Sbjct: 79  AIEANHLRSIADTTQLNDIKQLQQAVSALKNAR-QIDLYGVATSGIVAQDFYQKLVRIGK 137

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +               +  +D++  +S+SG ++E    L  A+      I++T    + 
Sbjct: 138 RTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALRCAKERGAVTISLTKFGTNP 197

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +A  +DI L      E    G     S I QL + D L  +L+
Sbjct: 198 LANLSDIRLFASTLEEGMRRGD--MASRIAQLHVIDILFTSLV 238


>gi|229542005|ref|ZP_04431065.1| 6-phospho 3-hexuloisomerase [Bacillus coagulans 36D1]
 gi|229326425|gb|EEN92100.1| 6-phospho 3-hexuloisomerase [Bacillus coagulans 36D1]
          Length = 183

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 68/172 (39%), Gaps = 13/172 (7%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R I      + ++ S + GE   Q     + + + K  + + G G+SG +    A  L  
Sbjct: 3   REIEVILNEIQTVFSKIDGE---QVEKLADMLASPKS-IFVLGEGRSGLMAKSFAMRLMH 58

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G   F V            I   DL+I +S SG++  +      +++  + ++ +TS+ 
Sbjct: 59  LGFHVFVVGETITP-----SIQPGDLLIAVSGSGTTSNVVQAAEKSKKNGVSVVGVTSDP 113

Query: 149 KSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQLAIGDALAIALLES 196
            S +A  +D V+ +P   +    G      P +S   Q       A+ L  +
Sbjct: 114 SSRLAQTSDSVVHIPSATKYRRPGEIESRQPLSSLFDQSVHLFFDAVCLKIA 165


>gi|83310643|ref|YP_420907.1| signal transduction protein [Magnetospirillum magneticum AMB-1]
 gi|82945484|dbj|BAE50348.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Magnetospirillum magneticum AMB-1]
          Length = 453

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---NTLSVEDVMIKNPK 294
            L DA+  + E R   +  +D   +  GI TE D+ R    +       +++  M K   
Sbjct: 9   TLHDAVHRMYEARVSSIVGIDAEGRTLGIFTERDLLRILSTNGPAGLEQTLDQTMTKPVA 68

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +  + VA+  + +  +  L+VVD+  + +G++    LL+
Sbjct: 69  TVSAEAYVYVALARMTRLGLRHLVVVDEDNRPLGMITGRALLK 111



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 35/108 (32%), Gaps = 15/108 (13%)

Query: 199 FSENDF-YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           F+E D   +L   G  G        +     +   V     +  A+  ++      + VV
Sbjct: 38  FTERDLLRILSTNGPAGLEQTLDQTMTKPVAT---VSAEAYVYVALARMTRLGLRHLVVV 94

Query: 258 DEGQKLKGIITEGDIF--RNFHKDLNTLSVED---------VMIKNPK 294
           DE  +  G+IT   +   R     +   S E          VM   PK
Sbjct: 95  DEDNRPLGMITGRALLKVRATEALVLGDSAESASNPDEMKAVMTNLPK 142


>gi|294496519|ref|YP_003543012.1| signal transduction protein with CBS domains [Methanohalophilus
           mahii DSM 5219]
 gi|292667518|gb|ADE37367.1| putative signal transduction protein with CBS domains
           [Methanohalophilus mahii DSM 5219]
          Length = 291

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 2/110 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                 V +   + +A  IL         V ++  K+ GI+T  DI         TL V+
Sbjct: 178 THQPIYVSVNSTIQEAARILVSNNIHGAPV-EDNGKMVGIVTFTDIGEALASGKMTLKVK 236

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D+M K    I  ++ L+ A+Q+  +++I  L+V  + +   G++   D+L
Sbjct: 237 DIMTKELITINGNSSLSDAVQIFNKYDIGRLVVTLNDE-PAGLLSKTDVL 285



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L   SV+  +   P  +  ++ +  A ++L  +NI    V +D  K +GIV F D+
Sbjct: 168 LPKKSVKHYITHQPIYVSVNSTIQEAARILVSNNIHGAPV-EDNGKMVGIVTFTDI 222


>gi|225568942|ref|ZP_03777967.1| hypothetical protein CLOHYLEM_05021 [Clostridium hylemonae DSM
           15053]
 gi|225162441|gb|EEG75060.1| hypothetical protein CLOHYLEM_05021 [Clostridium hylemonae DSM
           15053]
          Length = 280

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 71/188 (37%), Gaps = 10/188 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALR-SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           SVT    ++ ++S  +      I +E   +  L  +L            +KI + +  V+
Sbjct: 71  SVTSSEIAMSESSAPESICNYVIQSE---IEMLRDTLSLMDFPTMDKVAKKICSAR-HVI 126

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
             G G+S        +     G          +    +GM   +DLI+ +S  G S  + 
Sbjct: 127 FIGEGRSYIAAQSACNRFDRLGILCSCYGDPHSMLPAIGMAQPEDLIVGISNFGHSRPVV 186

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCPHGLA----PTTSAIMQL 183
             + YAR   +P +AITS   S +A  A+ ++            G      P +  + Q 
Sbjct: 187 NCIKYAREHGVPTVAITSSQDSPLAQQAESLIITGFNYNNLANQGEIICYEPMSENLPQF 246

Query: 184 AIGDALAI 191
           ++ D L +
Sbjct: 247 SLIDCLYL 254


>gi|39997108|ref|NP_953059.1| CBS domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39983998|gb|AAR35386.1| CBS domain protein [Geobacter sulfurreducens PCA]
 gi|298506121|gb|ADI84844.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
          Length = 144

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG---DIFRNFHKDLNT 282
              +   ++    +I+A+ ++ EK    + V+D+   + GI+TE    D   +    L+T
Sbjct: 8   MTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILTEKMVADFRPSKATSLDT 66

Query: 283 ---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                     SV + M   P  +  DT LT A QLL    ++ ++VVDD  + +GI+   
Sbjct: 67  WEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKLNGVLVVDDNDRLVGILTVT 126

Query: 334 DLLRF 338
           + L  
Sbjct: 127 NALEA 131



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             V   M KNP  I +D  +  A+ L+++ +I  L V+D     +GI+ 
Sbjct: 2   TKVGTWMTKNPVTIEKDATVIEAVHLMKEKSIRRLPVMDKE-TIVGILT 49



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 15/85 (17%), Positives = 26/85 (30%), Gaps = 7/85 (8%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDV-------MHSGDSIPLVKIGCPLIDAITILSEKRF 251
            +E       P             +                VK    L +A  +L +++ 
Sbjct: 48  LTEKMVADFRPSKATSLDTWEVHYILSKTSVTEAMNPKPYKVKPDTDLTEAAQLLHDRKL 107

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNF 276
             V VVD+  +L GI+T  +     
Sbjct: 108 NGVLVVDDNDRLVGILTVTNALEAL 132


>gi|314932796|ref|ZP_07840165.1| 6-phospho 3-hexuloisomerase [Staphylococcus caprae C87]
 gi|313654477|gb|EFS18230.1| 6-phospho 3-hexuloisomerase [Staphylococcus caprae C87]
          Length = 182

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L       +      +     R+ + G G+SG + +  A  L   G  ++ V 
Sbjct: 11  LDELDHTLSHVDDTSYERFANDVVGAD-RIFVAGKGRSGFVANSFAMRLNQLGEHAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A++    ++ IT++  S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQKIGAKVVLITTQTDSPIGELAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            ++ LP   +    G   P  S   Q  L + D++ + L+E+ + +E      H
Sbjct: 125 TIIELPAGTKHDIEGSKQPLGSLFEQASLVLLDSVVLPLMEAFHINEETMQQNH 178


>gi|299135308|ref|ZP_07028499.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
 gi|298590285|gb|EFI50489.1| putative signal transduction protein with CBS domains [Afipia sp.
           1NLS2]
          Length = 142

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           ++    L DAI +L+E+  G V V+ +   ++GI++E D+ R   K    +  + V +VM
Sbjct: 17  IEADAKLSDAIRVLTERHVGAVLVM-KDHHIEGILSERDVVRVLGKHGASVLAMPVSEVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +              M+ +       L VV++  + +G++   D++++ +
Sbjct: 76  TRKVVTCRRADTAASIMEKMTNGKFRHLPVVENE-RVVGLISIGDIVKWRV 125


>gi|255656968|ref|ZP_05402377.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-23m63]
 gi|296452190|ref|ZP_06893898.1| possible transcriptional regulator RpiR [Clostridium difficile
           NAP08]
 gi|296877543|ref|ZP_06901575.1| possible transcriptional regulator RpiR [Clostridium difficile
           NAP07]
 gi|296258929|gb|EFH05816.1| possible transcriptional regulator RpiR [Clostridium difficile
           NAP08]
 gi|296431445|gb|EFH17260.1| possible transcriptional regulator RpiR [Clostridium difficile
           NAP07]
          Length = 283

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AVE+I   K  V I G+G S  +   L   L      +F    +         + ++D+
Sbjct: 121 EAVEQIIKAKN-VYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKEDI 179

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            I +S+SG S E+   +  A+     +I +T  + + ++  +D+ L +P   +    G  
Sbjct: 180 SIAISYSGESKEVIKSIENAKLKGCKVICMTKYSDNHLSKISDLKLVVPNIEKRLREGAI 239

Query: 175 PTTSAIMQL 183
            +  A++ L
Sbjct: 240 SSRIAMLTL 248


>gi|309775309|ref|ZP_07670318.1| transcription regulator [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916972|gb|EFP62703.1| transcription regulator [Erysipelotrichaceae bacterium 3_1_53]
          Length = 281

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/208 (18%), Positives = 76/208 (36%), Gaps = 12/208 (5%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H   S F ++   G ++        A  +  +   G++SL S++          A++ + 
Sbjct: 78  HQSESFFATLDEHGTTM------NIAKATFQS---GITSLSSTMAILNQESLDKAIQLLS 128

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +    + G+G S  I          T     F           G ++  D  +++S +
Sbjct: 129 NAET-CGLFGMGASSVIVHSAYQRFLRTSLNCQFSLDYHMQLMVAGRLSERDCALIVSHT 187

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + ++  I+   +   +P+IAITS   S +A  +DI L      E         +S++ 
Sbjct: 188 GRNKDVLRIVDVLKENHVPIIAITSNAASPLARKSDIFLF--SISEETKFRPEAISSSVS 245

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHP 209
           QL + D L        +     F  +  
Sbjct: 246 QLMLMDTLFTLYAIKVDNDPEFFNRIRK 273


>gi|229823300|ref|ZP_04449369.1| hypothetical protein GCWU000282_00598 [Catonella morbi ATCC 51271]
 gi|229787075|gb|EEP23189.1| hypothetical protein GCWU000282_00598 [Catonella morbi ATCC 51271]
          Length = 280

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/137 (21%), Positives = 59/137 (43%), Gaps = 2/137 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L  + +         A++ + +   R+ + GIG SG +   L   L     P  +   
Sbjct: 105 QNLRRTYELIDEAVLAQAIDMMASAH-RLFLCGIGGSGIVCMDLVHKLTRINRPVTYDRD 163

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS-ENKSVVACHAD 157
                  +      D+++V+S+SG++  +  + Y A+     +IAIT    K+ +A  AD
Sbjct: 164 THVLMAQMAHCMPGDVVLVVSYSGNTHTVNQMAYLAKEQGAKIIAITGHNLKAPLASLAD 223

Query: 158 IVLTLPKEPESCPHGLA 174
           + L +P++ +    G  
Sbjct: 224 VCLFIPRDEKEIRLGSV 240


>gi|221235645|ref|YP_002518082.1| CBS domain containing protein [Caulobacter crescentus NA1000]
 gi|220964818|gb|ACL96174.1| CBS domain containing protein [Caulobacter crescentus NA1000]
          Length = 143

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
                +  A  +L  ++ G + VVD+ + + GI++E DI R   K+     T  +   M 
Sbjct: 18  SPQETVGAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVRMVAKEGAAALTKPISGCMS 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            N      D  +   ++ +    I  L VV    +  GI+   DL+++ I
Sbjct: 78  ANVVFAQPDETIDALLERMTDRRIRHLPVV-QNDRLAGIISIGDLVKYKI 126



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  +  A  LL    +  ++VVDD +  +GIV   D++R
Sbjct: 16  TASPQETVGAAAALLHTRKVGAMVVVDDKEAVVGIVSERDIVR 58


>gi|218297014|ref|ZP_03497691.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
 gi|218242569|gb|EED09106.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
          Length = 143

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/102 (22%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
              ++  G ++  +     +++A+  +++   G + V+ EG++L GI +E D  R     
Sbjct: 4   RQVLLRKGGAVYAISPQATVLEALERMAQHDIGALLVM-EGEELVGIFSERDYARKLVLL 62

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +      VE+VM +    I  +  L  AM+L+ +H +  L 
Sbjct: 63  GRFSKDTRVEEVMTREVVTIRPEADLAEAMRLMTEHRVRHLP 104


>gi|167922604|ref|ZP_02509695.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           BCC215]
 gi|284159971|ref|YP_001062484.2| HPP family/CBS domain-containing protein [Burkholderia pseudomallei
           668]
 gi|283775161|gb|ABN88360.2| HPP family/CBS domain membrane protein [Burkholderia pseudomallei
           668]
          Length = 397

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 182 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 233

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 234 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 292

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 293 RVVGIVTRADLSKA 306



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 264 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 323

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 324 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 383

Query: 336 LRFGI 340
           +  G+
Sbjct: 384 I-AGL 387


>gi|160935337|ref|ZP_02082719.1| hypothetical protein CLOBOL_00232 [Clostridium bolteae ATCC
           BAA-613]
 gi|158441695|gb|EDP19395.1| hypothetical protein CLOBOL_00232 [Clostridium bolteae ATCC
           BAA-613]
          Length = 497

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 12/162 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +A+AL +     F      +      +  +    +  + S  + 
Sbjct: 51  NIPMVSAIMQSVSDDRMAVALAQEGGISFIYGSQAIEKQAEMIHKVKRYRAGFVVSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             V     L D + I  E     +AV  +     KL GI+T  D      +      V+D
Sbjct: 110 --VSPDMTLADVLAITEETGHSTIAVTADGQPNGKLLGIVTNKDYR--VSRMGPDTKVKD 165

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            M    N     E T L  A  ++ +H I+ L +V+  Q+ +
Sbjct: 166 FMTTLDNLVYADESTTLKEANDIIWEHKINCLPLVNKNQELV 207


>gi|27364253|ref|NP_759781.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           vulnificus CMCP6]
 gi|320157646|ref|YP_004190025.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           vulnificus MO6-24/O]
 gi|27360371|gb|AAO09308.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           vulnificus CMCP6]
 gi|319932958|gb|ADV87822.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase [Vibrio
           vulnificus MO6-24/O]
          Length = 348

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 2/109 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              LV     +   +  + ++      VVDE  KL G +++GDI R   +D +   SV+ 
Sbjct: 6   KKILVSPSASIRSVLRTIDQQALKLALVVDEQNKLLGTVSDGDIRRAILRDASLEDSVDL 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM   P            + L+ +  +  + ++      IG+     LL
Sbjct: 66  VMNTQPTTADVSMSRDNILSLMERKELHAIPIL-SNGIVIGLETLHGLL 113


>gi|18313303|ref|NP_559970.1| hypothetical protein PAE2382 [Pyrobaculum aerophilum str. IM2]
 gi|18160827|gb|AAL64152.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 142

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 53/105 (50%), Gaps = 4/105 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDL-NTLSVEDVMIK 291
               + D   I++E++ G V +V++ Q     G+++E D+ R    ++   L V+++M  
Sbjct: 16  PDMRIKDVAKIMAERKIGLVVIVEKNQPDVAIGVVSERDLVRAVANNVGLNLPVKEIMSS 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  +  +    +++R+HNI  ++V +   K  G++   DL+
Sbjct: 76  PVITVEGEEPIWNVAKIMREHNIRHVVVTNK-GKLYGVISIRDLV 119



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           +  E +  K P     D  +    +++ +  I ++++V+  Q   AIG+V   DL+R 
Sbjct: 1   MKAEILARKPPITATPDMRIKDVAKIMAERKIGLVVIVEKNQPDVAIGVVSERDLVRA 58


>gi|167849442|ref|ZP_02474950.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           B7210]
 gi|254300396|ref|ZP_04967842.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           406e]
 gi|157810026|gb|EDO87196.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           406e]
          Length = 382

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 167 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 218

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 219 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 277

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 278 RVVGIVTRADLSKA 291



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 249 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 308

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  L    VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 309 RSLVGPALVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 368

Query: 336 LRFGI 340
           +  G+
Sbjct: 369 I-AGL 372


>gi|325522575|gb|EGD01119.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia sp. TJI49]
          Length = 642

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIETLNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|315645683|ref|ZP_07898807.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
 gi|315279161|gb|EFU42471.1| transcriptional regulator, RpiR family protein [Paenibacillus
           vortex V453]
          Length = 291

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 64/178 (35%), Gaps = 9/178 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L+S+  + +     Q   AV+ +   K R+ + G+  S  +       L   G 
Sbjct: 104 AIESNHLTSIRDTTELLDLGQLERAVDALCRAK-RIDLYGVATSSIVAQDFYQKLIRIGK 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                  +         +T  D+ + +S+SG + E    L  A+      I++TS   S 
Sbjct: 163 NCTAFADSHMQITSASTLTSSDVAVAVSYSGETPETIDALACAKDTGAFTISVTSYRSSA 222

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           ++  ADI L      E    G     S I QL I D L + +         DF    P
Sbjct: 223 ISSMADITLYSSSLEEGMRRGD--MASRIAQLHIIDILFMGMASR------DFSTYVP 272


>gi|239813716|ref|YP_002942626.1| CBS domain containing protein [Variovorax paradoxus S110]
 gi|239800293|gb|ACS17360.1| CBS domain containing protein [Variovorax paradoxus S110]
          Length = 144

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNT 282
               +  V  G  ++ A   L E   G + V D G +L G++T+ DI  R   +  DL  
Sbjct: 8   MTRGVRTVAPGDTIVQAAKALEELEVGVLPVCD-GSRLVGVVTDRDIAVRGVAREIDLGA 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             V+ +M  +      D  +  A+  +    I  L VVD  ++ +GI+   D
Sbjct: 67  SPVKQIMTADAYWCYADDTVDEALSQMSAVQIRRLPVVDRDKRLVGILSLGD 118



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V +VM +  + +     +  A + L +  + VL V D   + +G+V   D+   G+
Sbjct: 2   TQVHEVMTRGVRTVAPGDTIVQAAKALEELEVGVLPVCDGS-RLVGVVTDRDIAVRGV 58


>gi|219851432|ref|YP_002465864.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219545691|gb|ACL16141.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 272

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D + IL       V V+ +  +L GIIT  D+ R      +   +  +M  +P  I    
Sbjct: 16  DVLKILKRTGISGVPVI-KEGRLIGIITRKDLLRK----PDETQLGLLMTPDPITIGPGA 70

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  A +LL +HNI  L VV+D    IG++   DL+  
Sbjct: 71  TIRDAARLLVKHNIRRLPVVEDD-SLIGLISVSDLIHA 107



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +  G  + DA  +L +     + VV++   L G+I+  D+         T  +
Sbjct: 59  MTPDPITIGPGATIRDAARLLVKHNIRRLPVVEDDS-LIGLISVSDLIHAIAHMKITDVI 117

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +         I E+T LTV  +++       + ++D      GI+   DL+R  +I
Sbjct: 118 KGTYTSQTFAIWEETPLTVVGKVMEISGFDAIPILDSENTLKGIISERDLIRSTVI 173



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 51/134 (38%), Gaps = 36/134 (26%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           +    PL     ++    F  + ++D    LKGII+E D+ R+                 
Sbjct: 128 IWEETPLTVVGKVMEISGFDAIPILDSENTLKGIISERDLIRSTVIEDSVGVSDFSNGTD 187

Query: 277 --------HKDLNTLS------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                    +D +TLS            V++ M+KN   +  +  ++     +++  I  
Sbjct: 188 DDEWTWESIRDNHTLSYSISKVQLPKKAVKNAMVKNVVAVPLNAEVSECALKMKRARIDQ 247

Query: 317 LMVVDDCQKAIGIV 330
           L V++  ++ I ++
Sbjct: 248 LPVINGDKRLIAML 261


>gi|219849116|ref|YP_002463549.1| putative signal transduction protein with CBS domains [Chloroflexus
           aggregans DSM 9485]
 gi|219543375|gb|ACL25113.1| putative signal transduction protein with CBS domains [Chloroflexus
           aggregans DSM 9485]
          Length = 133

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 10/130 (7%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +     +VMH G      K   P+ D    +SE+    + VVD+   + G+++  D+   
Sbjct: 1   MERTVGEVMHVGVLTC--KRETPIQDVARQMSEQDVSALVVVDDEGYMVGLVSRTDLVNA 58

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AI 327
                + K    L+   +MI +   +     L  A +L+ +  I  ++VV+  +K    I
Sbjct: 59  RLYEQYWKHWRGLTAGHIMITDVVSVTPQDTLQHASRLMMERRIHRVVVVEPGEKGLRPI 118

Query: 328 GIVHFLDLLR 337
           G++   D++R
Sbjct: 119 GVLSVTDVVR 128



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +V +VM         +T +    + + + ++S L+VVDD    +G+V   DL+   +
Sbjct: 2   ERTVGEVMHVGVLTCKRETPIQDVARQMSEQDVSALVVVDDEGYMVGLVSRTDLVNARL 60


>gi|325958055|ref|YP_004289521.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325329487|gb|ADZ08549.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 280

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + +++    +  A  ++       V VVD      G++TE D+ +           
Sbjct: 7   MNPEVFVIQENQHVSQARNLMISHGISRVVVVDGNGAPVGMVTEKDLTKKLKGKGPRWKT 66

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L+ +S++ VM  NP     D  +   ++LL +++I  + +VD+     GI+   DL++
Sbjct: 67  RPLDKISIKRVMSSNPITASPDDNVQKVIELLIKNHIGSVPIVDEDG-LAGIITKTDLMK 125

Query: 338 F 338
            
Sbjct: 126 I 126



 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 4/125 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            G +  T  +    +     S P+       +   I +L +   G V +VDE   L GII
Sbjct: 60  KGPRWKTRPLDKISIKRVMSSNPITASPDDNVQKVIELLIKNHIGSVPIVDEDG-LAGII 118

Query: 268 TEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           T+ D+ + +   L     V D+M  +   + E+  +   + L+  + I  ++V+    + 
Sbjct: 119 TKTDLMKIYTDKLRGKWKVSDLMTGDVITVNENHSIAHVISLMEDNRIGKMIVI-RDNEP 177

Query: 327 IGIVH 331
           +GI+ 
Sbjct: 178 VGIIT 182



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 24/133 (18%), Positives = 54/133 (40%), Gaps = 31/133 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT------------------------ 268
           V     +   I+++ + R G + V+ + +   GIIT                        
Sbjct: 148 VNENHSIAHVISLMEDNRIGKMIVIRDNE-PVGIITHEHISFAYIEDPETGVNVEKIYFI 206

Query: 269 ----EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
               +G   +NF + ++ ++  D+M  +   I  D     A  ++ +++I+ L VV +  
Sbjct: 207 RNSEDGQSKKNF-RVVSMMTAGDIMQNHMIKISLDEDAATAADMMIENDINGLAVV-NGD 264

Query: 325 KAIGIVHFLDLLR 337
             +G++   DL++
Sbjct: 265 VLVGVITKTDLIK 277



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++M     VI E+  ++ A  L+  H IS ++VVD     +G+V   DL + 
Sbjct: 3   ISELMNPEVFVIQENQHVSQARNLMISHGISRVVVVDGNGAPVGMVTEKDLTKK 56


>gi|239828029|ref|YP_002950653.1| signal transduction protein with CBS and DRTGG domains [Geobacillus
           sp. WCH70]
 gi|239808322|gb|ACS25387.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. WCH70]
          Length = 438

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 75/194 (38%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T  ++  +   A +++T   + E     LA      +     D   +A + +R   +   
Sbjct: 126 TKAHERALEAGAAVLITGGFDTEDHVKKLADELQLPIISTSYDTFTVATMINRAIYD--- 182

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   +    V   D++   +    +    P+     +  E R     VVD+  K++
Sbjct: 183 ------QLIKKEIVLVEDILIPLEKTAYLYTTDPIERWYELNRETRHSRFPVVDQQLKVQ 236

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G++T  D+      D   L +E  M K+P  +   T +  A  ++    I +L VVD+  
Sbjct: 237 GVVTTKDV---LDFD-RKLPIEKAMTKHPITVKGKTSVASASHIMVWEGIELLPVVDEHN 292

Query: 325 KAIGIVHFLDLLRF 338
           +  GI+   D+L+ 
Sbjct: 293 RLQGIISRQDVLKA 306



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  VK    +  A  I+  +    + VVDE  +L+GII+  D+ +          V
Sbjct: 257 MTKHPITVKGKTSVASASHIMVWEGIELLPVVDEHNRLQGIISRQDVLKALQMIQRQPQV 316

Query: 286 ED 287
            +
Sbjct: 317 GE 318


>gi|332800152|ref|YP_004461651.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
 gi|332697887|gb|AEE92344.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
          Length = 132

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 58/119 (48%), Gaps = 3/119 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
               + +++    +  A+ I+++++     +VDE  +L G+I + DI+R         + 
Sbjct: 7   MKSPVIVIRPDETVDRALEIMNKEKVNGTPIVDEDNRLVGMIVKADIYRFLMDPGHYKSC 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLRFGII 341
            VE VM K       D  +    + LR +NI  L VV+ D  + +GI+ F D+L + II
Sbjct: 67  PVEWVMTKEVIKAHADEEILDVAKRLRDYNIIALPVVEGDNDEVVGIISFEDILDYYII 125



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 30/56 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + ++M     VI  D  +  A++++ +  ++   +VD+  + +G++   D+ RF
Sbjct: 1   MKIREIMKSPVIVIRPDETVDRALEIMNKEKVNGTPIVDEDNRLVGMIVKADIYRF 56


>gi|322373958|ref|ZP_08048493.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
 gi|321277330|gb|EFX54400.1| acetoin utilization protein AcuB [Streptococcus sp. C150]
          Length = 219

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ EK    + V+ E  KL G+ITEG +                +  L
Sbjct: 14  VSPQTTVAAAADIMREKGLRRLPVI-ENDKLVGLITEGTMADASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ ++ + VL VVD+ Q   GI+   D+ R 
Sbjct: 73  NKTKVGDIMIKNVLTVSKYASLEDAIYIMLKNKVGVLPVVDNDQ-ISGIITDKDVFRA 129



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +   T +  A  ++R+  +  L V+++  K +G++ 
Sbjct: 1   MAVKDFMAKRVVYVSPQTTVAAAADIMREKGLRRLPVIEND-KLVGLIT 48



 Score = 43.7 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+FR F
Sbjct: 88  VSKYASLEDAIYIMLKNKVGVLPVVDND-QISGIITDKDVFRAF 130


>gi|254450736|ref|ZP_05064173.1| inosine-5'-monophosphate dehydrogenase [Octadecabacter antarcticus
           238]
 gi|198265142|gb|EDY89412.1| inosine-5'-monophosphate dehydrogenase [Octadecabacter antarcticus
           238]
          Length = 482

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 63/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  V     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEARMAIAMAQAGGMGVIHKNLTVDEQAREVRRVKRFESGIVYNPVTL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  ++    F    VVDE  ++ GI+T  D+      D     V  +M 
Sbjct: 99  ---RPDQTLADAKALIERYNFTGFPVVDEKGRVMGIVTNRDMRFATSDD---QPVSTMMT 152

Query: 291 KNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            N   I  E      A+ +++   +  L+V D      G++   D
Sbjct: 153 SNDLAIMREPADRDDAISMMKSKRLEKLLVTDSNGVLTGLLTLKD 197



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++N +   VVD+  + +GIV   D+
Sbjct: 94  NPVTLRPDQTLADAKALIERYNFTGFPVVDEKGRVMGIVTNRDM 137


>gi|187924409|ref|YP_001896051.1| inosine 5'-monophosphate dehydrogenase [Burkholderia phytofirmans
           PsJN]
 gi|187715603|gb|ACD16827.1| inosine-5'-monophosphate dehydrogenase [Burkholderia phytofirmans
           PsJN]
          Length = 486

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 65/169 (38%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIHKNLTAAEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +       VV EG +L GI+T  D+   F + L+   V ++M 
Sbjct: 97  ITVPPQMKVRDVIALSQQHGISGFPVV-EGAQLIGIVTNRDLR--FEERLDE-PVRNIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E T L  A  L+  H +  ++V++D  +  G++   D+ +
Sbjct: 153 PRERLVTVKEGTPLAEAKALMHSHRLERVLVINDAFELRGLMTVKDITK 201


>gi|296389753|ref|ZP_06879228.1| CBS domain-containing membrane protein [Pseudomonas aeruginosa
           PAb1]
          Length = 385

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L E R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 33/65 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + +  L+   +M ++ +    +T +  A + L++H +  L V+D+ ++  GIV  
Sbjct: 232 RYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQ 291

Query: 333 LDLLR 337
            DLL+
Sbjct: 292 SDLLK 296



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|288560309|ref|YP_003423795.1| transcriptional regulator [Methanobrevibacter ruminantium M1]
 gi|288543019|gb|ADC46903.1| transcriptional regulator [Methanobrevibacter ruminantium M1]
          Length = 308

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           K G  + DA  +LS  +     V+ E     G+++  DI     +      V D+M K  
Sbjct: 185 KPGDSIKDAAYLLSHNQIDGAPVITE-GVAIGMVSLIDIVNALAEGKENEDVRDIMSKRL 243

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I +DTL+  A+  + +  IS L+VVDD    IG+V   DL+
Sbjct: 244 FFINKDTLIANAVYKMYKFGISRLIVVDDEHAPIGVVTRTDLI 286


>gi|281208518|gb|EFA82694.1| putative acetoin dehydrogenase [Polysphondylium pallidum PN500]
          Length = 227

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 12/112 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              +I  V +   L  A+  L+      + V+D+   LKGIIT+ D+             
Sbjct: 17  MTKTIYSVSMDSTLDMALKCLNTHSIHRIPVIDDDGNLKGIITDRDLRLACDSPFLPESN 76

Query: 278 ----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                 L+   V  VM  NP  I E++ +    +LLR  ++  L VVD+  K
Sbjct: 77  EERVMKLSQHKVSQVMKNNPLTIEENSPVVDVAKLLRVSDVGGLPVVDNNGK 128



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++  + V+ +M K    +  D+ L +A++ L  H+I  + V+DD     GI+   DL
Sbjct: 7   NVTNVLVKHLMTKTIYSVSMDSTLDMALKCLNTHSIHRIPVIDDDGNLKGIITDRDL 63


>gi|255264171|ref|ZP_05343513.1| inosine-5'-monophosphate dehydrogenase [Thalassiobium sp. R2A62]
 gi|255106506|gb|EET49180.1| inosine-5'-monophosphate dehydrogenase [Thalassiobium sp. R2A62]
          Length = 482

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 61/165 (36%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTEGRMAIAMAQAGGIGVVHRNLDIEEQAREIRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                   L DA  +    R     V+     + GI+T  D+        +   V  +M 
Sbjct: 99  T---SDQTLADAKALQERYRVTGFPVIGPEGHVVGIVTNRDMRFASD---DNTPVSAMMT 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E   L  A  L+R   I  L+VVD   K  G++   D
Sbjct: 153 TDNLAMLQEPADLDEARSLMRARRIEKLLVVDTDGKLTGLLTLKD 197



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   V+      +GIV   D+
Sbjct: 94  NPITLTSDQTLADAKALQERYRVTGFPVIGPEGHVVGIVTNRDM 137


>gi|86137571|ref|ZP_01056148.1| GGDEF domain protein [Roseobacter sp. MED193]
 gi|85825906|gb|EAQ46104.1| GGDEF domain protein [Roseobacter sp. MED193]
          Length = 313

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---VEDVM 289
           +     L  A  +L E + G + V D+  KL GI++E D+           +   V +VM
Sbjct: 18  IDPSATLRQAAQVLLENKLGALVVTDQSNKLIGIVSERDLLSVVASRDPKAADALVCEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++      D  +   + L+ ++ I  + V+   ++ +GI+   +L + 
Sbjct: 78  TRSVICCGPDDEVAYLLHLMNENAIRHIPVL-QQEELVGILSIRELTKA 125



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 22/47 (46%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               K I     L  A Q+L ++ +  L+V D   K IGIV   DLL
Sbjct: 12  STGVKGIDPSATLRQAAQVLLENKLGALVVTDQSNKLIGIVSERDLL 58


>gi|322390023|ref|ZP_08063561.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
 gi|321143277|gb|EFX38717.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
          Length = 255

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 16/144 (11%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                 +G L +   D M     +  +     +  A  ++ E+    + V+ E  KL G+
Sbjct: 27  NKTNKSIGELVMAVKDFM--TRKVVYISPDTTIAHAADLMREQGLHRLPVI-ENDKLVGL 83

Query: 267 ITEGDIFRN------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +TEG I                +  LN   V+DVM+++   + +   L  A  L+ ++ +
Sbjct: 84  VTEGTIAEASPSKATSLSIFEMNYLLNKTKVKDVMLRDVITVSKFASLEDATYLMYKNKV 143

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
            +L VVD+ Q   G++   D+ R 
Sbjct: 144 GILPVVDNDQ-VSGVITDRDIFRA 166



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DA  ++ + + G + VVD   ++ G+IT+ DIFR F
Sbjct: 125 VSKFASLEDATYLMYKNKVGILPVVDND-QVSGVITDRDIFRAF 167


>gi|167898045|ref|ZP_02485447.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           7894]
          Length = 239

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 24  HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 75

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 76  SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 134

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 135 RVVGIVTRADLSKA 148



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 106 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 165

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 166 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 225

Query: 336 LRFGI 340
           +  G+
Sbjct: 226 I-AGL 229


>gi|254976591|ref|ZP_05273063.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-66c26]
 gi|255093975|ref|ZP_05323453.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile CIP 107932]
 gi|255315727|ref|ZP_05357310.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-76w55]
 gi|255518388|ref|ZP_05386064.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-97b34]
 gi|255651506|ref|ZP_05398408.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-37x79]
 gi|260684563|ref|YP_003215848.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile CD196]
 gi|260688221|ref|YP_003219355.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile R20291]
 gi|306521326|ref|ZP_07407673.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile QCD-32g58]
 gi|260210726|emb|CBA65580.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile CD196]
 gi|260214238|emb|CBE06525.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium difficile R20291]
          Length = 283

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 56/129 (43%), Gaps = 1/129 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
            AVE+I   K  V I G+G S  +   L   L      +F    +         + ++D+
Sbjct: 121 EAVEQIIKAKN-VYIFGVGGSALVALDLQMKLLRINKQAFTSLDSHTQLMVSSNVDKEDI 179

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            I +S+SG S E+   +  A+     +I IT  + + ++  +D+ L +P   +    G  
Sbjct: 180 AIAISYSGESKEVIKSIENAKLKGCKVICITKYSDNHLSKISDLKLVVPNIEKRLREGAI 239

Query: 175 PTTSAIMQL 183
            +  A++ L
Sbjct: 240 SSRIAMLTL 248


>gi|116753914|ref|YP_843032.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665365|gb|ABK14392.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 283

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 6/96 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
            + +L+E+    V VV +   + G++T  D+ RN  +D     +  +M +NP V+  +  
Sbjct: 25  VLKVLNERHVSGVPVV-KNCTVVGMVTRTDLLRNPEED----QIAMLMTRNPYVVHPEDR 79

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  A +L  +  +  L VV+D  + +GI+   DL++
Sbjct: 80  LVDAAKLFVEKRVRRLPVVEDE-RLVGIISVADLVK 114



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +  +V     L+DA  +  EKR   + VV E ++L GII+  D+ +         ++
Sbjct: 67  MTRNPYVVHPEDRLVDAAKLFVEKRVRRLPVV-EDERLVGIISVADLVKVIASLNIDETI 125

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +    +N  V+  +  L V   ++    +    V+D   + +GI+   DL+   ++
Sbjct: 126 DKYFERNVVVVWAEMPLPVVGAIMEYAGVQACPVIDTDLQLVGIITDRDLIAKSVV 181



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/150 (16%), Positives = 50/150 (33%), Gaps = 37/150 (24%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------- 272
             +   ++ +V    PL     I+         V+D   +L GIIT+ D+          
Sbjct: 126 DKYFERNVVVVWAEMPLPVVGAIMEYAGVQACPVIDTDLQLVGIITDRDLIAKSVVEESL 185

Query: 273 -------------------FRNFHKD-------LNTLSVEDVMIKNPKVILEDTLLTVAM 306
                                   +        L  + V++ M       L  + ++   
Sbjct: 186 EKADADTAPEMDEWSWESQKEAISRYYQVSKITLKNVKVKEAM-VQAITALRSSRVSECA 244

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + Q  I  + VV+  +K IG+++  +LL
Sbjct: 245 RTMSQKRIDQMPVVNAHRKLIGMLNDHNLL 274



 Score = 39.1 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 285 VEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D M+++   +    T     +++L + ++S + VV +C   +G+V   DLLR
Sbjct: 5   VRDAMVRDVAYVSLPGTR-DKVLKVLNERHVSGVPVVKNC-TVVGMVTRTDLLR 56


>gi|150401586|ref|YP_001325352.1| sugar isomerase (SIS) [Methanococcus aeolicus Nankai-3]
 gi|150014289|gb|ABR56740.1| sugar isomerase (SIS) [Methanococcus aeolicus Nankai-3]
          Length = 194

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/161 (22%), Positives = 64/161 (39%), Gaps = 18/161 (11%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           K+   ++ I GIG+SG +G   A  L   G  S F+  A         ++ +DL+IV+S 
Sbjct: 35  KSESSKIYIYGIGRSGFVGKAFAMRLMHLGFKSHFIGEATCP-----AVSNNDLLIVVSG 89

Query: 121 SGSSDELKAILYYARRFS----------IPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           SG +  +  +L    + +          I +I+IT  N   +   +D ++ L  +     
Sbjct: 90  SGETYSIVNLLNKINKINNKLELKGKNKIKIISITHNNNCTLKELSDFIVNLAIDESDKT 149

Query: 171 HGLAPTTSAI---MQLAIGDALAIALLESRNFSENDFYVLH 208
                    +   +     D +   L+E  N SE D    H
Sbjct: 150 ENKCFPMGTLFEEIAFIYLDTIIYNLMEKLNISEEDMKKRH 190


>gi|126458826|ref|YP_001055104.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126248547|gb|ABO07638.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 138

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
                + D  T LS+ R G + +V  D+ ++   +++E D+ R   + L+       +  
Sbjct: 16  PESATIRDVATALSQNRVGLLVLVSKDDPKRPVAVVSERDVLRAVAQRLDLDGPAMSIAN 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + P  +L+   + VA + +R HNI  ++VVD   + +G++   D+
Sbjct: 76  R-PITVLDTDPVYVAAEKMRAHNIRHVVVVDKEGRLVGVLSIRDI 119



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
           +V DV+ + P  + E   +      L Q+ + +L++V  DD ++ + +V   D+LR 
Sbjct: 3   TVSDVLKRPPVTLPESATIRDVATALSQNRVGLLVLVSKDDPKRPVAVVSERDVLRA 59


>gi|83955439|ref|ZP_00964070.1| Putative inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp.
           NAS-14.1]
 gi|83840083|gb|EAP79258.1| Putative inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp.
           NAS-14.1]
          Length = 482

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGGMGVIHRNLTIDEQSKEVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +    R     VVDE  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPDQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDMRFASD---DATPVRLMMS 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SDNLALLQEPADRDEAISLMKARRIEKLLVTDAKGKLTGLLTLKD 197



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLRPDQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDM 137


>gi|322383813|ref|ZP_08057561.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321151818|gb|EFX44764.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 285

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 62/163 (38%), Gaps = 3/163 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L S+  + Q     Q   AV  +K  + ++ + G+  SG +       L   G 
Sbjct: 99  AIEANHLRSIADTTQLNDIKQLQQAVSALKNAR-QIDLYGVATSGIVAQDFYQKLVRIGK 157

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +               +  +D++  +S+SG ++E    L  A+      I++T    + 
Sbjct: 158 RTSVFSDPHMQITSASNLGENDVVFAISYSGDTEETIQALRCAKERGAVTISLTKFGTNP 217

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +A  +DI L      E    G     S I QL + D L  +L+
Sbjct: 218 LANLSDIRLFASTLEEGMRRGD--MASRIAQLHVIDILFTSLV 258


>gi|289579767|ref|YP_003478233.1| CBS domain containing membrane protein [Natrialba magadii ATCC
           43099]
 gi|289529320|gb|ADD03671.1| CBS domain containing membrane protein [Natrialba magadii ATCC
           43099]
          Length = 398

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 1/109 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P V     + +   +L E       V  E   L G+IT+  I     ++L+TL+VE
Sbjct: 85  NTPSPKVDRQEDVRETARVLIEGNAKVAPVF-ENDDLWGVITDDAILEAVLENLDTLTVE 143

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D+   +P  + ED  +  A+  LR+H IS + V++D     G+V   D+
Sbjct: 144 DIYTSDPVTLQEDDGIGKAINHLREHGISRIPVLNDNGYLTGVVTTHDI 192



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 46/122 (37%), Gaps = 17/122 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------------FRNFHK 278
           +    +  AI  L E     + V+++   L G++T  DI                    +
Sbjct: 154 QEDDGIGKAINHLREHGISRIPVLNDNGYLTGVVTTHDIADFVIRKNHTMTTGDRVGDSQ 213

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
            L  + + D+M         D     A++ +   + + LMV   DD +  IG++   D+L
Sbjct: 214 RLLDVPIYDIMNSPVVTTTLDATAKEAVERMLDQDYAGLMVTPEDDDRVVIGVITKTDIL 273

Query: 337 RF 338
           R 
Sbjct: 274 RA 275


>gi|54307975|ref|YP_128995.1| inosine 5'-monophosphate dehydrogenase [Photobacterium profundum
           SS9]
 gi|46912401|emb|CAG19193.1| putative inosine-5-monophosphate dehydrogenase [Photobacterium
           profundum SS9]
          Length = 487

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 14/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M        AIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMVSAAMDTVTEGRFAIALAQEGGIGFIHKNMSIEQQANQVRMVKKFEAGVV---SEP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             VK    + D   +  E  F    VV +  +L GIIT  D+   F  DL ++ VEDVM 
Sbjct: 98  VTVKPTATIADVKQLTLENGFAGYPVVSDNNELVGIITGRDVR--FVTDL-SIKVEDVMT 154

Query: 291 KNPKV----ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             PK       E         +++++ +  +++V+D  +  G++   D  + 
Sbjct: 155 --PKTKLAAAKEGASREDVEAIMQEYRVEKVLLVNDDFQLKGMITAKDFQKA 204


>gi|311031331|ref|ZP_07709421.1| hypothetical protein Bm3-1_12426 [Bacillus sp. m3-13]
          Length = 435

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++   ++   +     + +   +  E +     ++D+  K++G++T  
Sbjct: 181 QLIKKEIVLVEDILTPIEATTYLTTEDTIAEWYKVNEEIKHSRFPIIDKNLKVQGVVTSK 240

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     KD  TL +E VM KNP  +   T +  A  ++    I +L VVD   + +GI+
Sbjct: 241 DV---LGKDSGTL-IEKVMTKNPITVNGKTSVASAAHIMVWEGIEMLPVVDPNHRLLGII 296

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 297 SRQDVLKA 304



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 27/183 (14%), Positives = 60/183 (32%), Gaps = 14/183 (7%)

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKS--VVACHADIVLTLPKEPESCPHGL 173
           ++++    +DE   +   A    +P+I+ + +  +   +   A     + KE       L
Sbjct: 137 VLITGGFDTDE--EVKKLADEMKLPIISSSYDTFTVATLINRAIYDQLIKKEIVLVEDIL 194

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH-------- 225
            P  +    L   D +A     +     + F ++    K+  +      +          
Sbjct: 195 TPIEATTY-LTTEDTIAEWYKVNEEIKHSRFPIIDKNLKVQGVVTSKDVLGKDSGTLIEK 253

Query: 226 -SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               +   V     +  A  I+  +    + VVD   +L GII+  D+ +          
Sbjct: 254 VMTKNPITVNGKTSVASAAHIMVWEGIEMLPVVDPNHRLLGIISRQDVLKALQMIQRQPQ 313

Query: 285 VED 287
           V +
Sbjct: 314 VGE 316


>gi|239832140|ref|ZP_04680469.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
 gi|239824407|gb|EEQ95975.1| CBS domain-containing protein [Ochrobactrum intermedium LMG 3301]
          Length = 143

 Score = 78.8 bits (193), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  + ++     L  A+ +L++ + G + V DE  ++KGI++E D+ R        
Sbjct: 7   LETKGRDVVVIAPADTLSHAVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVAAQETK 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++ V +VM    +V  E   +   M+++ +     + V ++  K +GIV   D+++  
Sbjct: 67  AMSMPVAEVMTAKVQVCREHHTINQVMEIMTRSRFRHMPV-EEGGKLVGIVSIGDVVKRR 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|326938494|gb|AEA14390.1| inosine-5'-monophosphate dehydrogenase [Bacillus thuringiensis
           serovar chinensis CT-43]
          Length = 139

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ Q+ I  L VVD   + IG++   DL
Sbjct: 67  KITNVMTTNIISVSPNDSIEKATELMAQYQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDLMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|83943213|ref|ZP_00955673.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
 gi|83846221|gb|EAP84098.1| hypothetical protein EE36_13568 [Sulfitobacter sp. EE-36]
          Length = 144

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 56/121 (46%), Gaps = 4/121 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
             + DS+  VK G  +  A  +LSEKR G + V  +G+   GI++E DI R   +     
Sbjct: 9   TKADDSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGREGGGC 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +VE +M ++     +D      +  + Q     + V+ +    IG++   D+++  +
Sbjct: 69  LDDTVEALMTRDLITCAKDETADDILAKMTQGRFRHMPVL-EDGVLIGLISLGDVVKARL 127

Query: 341 I 341
           +
Sbjct: 128 M 128


>gi|313110556|ref|ZP_07796441.1| putative CBS-domain-containing-containing membrane protein
           [Pseudomonas aeruginosa 39016]
 gi|310882943|gb|EFQ41537.1| putative CBS-domain-containing-containing membrane protein
           [Pseudomonas aeruginosa 39016]
          Length = 385

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L E R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 33/65 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + +  L+   +M ++ +    +T +  A + L++H +  L V+D+ ++  GIV  
Sbjct: 232 RYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQ 291

Query: 333 LDLLR 337
            DLL+
Sbjct: 292 SDLLK 296



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|310642759|ref|YP_003947517.1| inosine-5-monophosphate dehydrogenase like protein [Paenibacillus
           polymyxa SC2]
 gi|309247709|gb|ADO57276.1| Inosine-5-monophosphate dehydrogenase like protein [Paenibacillus
           polymyxa SC2]
          Length = 142

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 46/114 (40%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDI--FRNFHKDLN 281
                  V     + +    + +   G + VV+     KL G++T+ D+       K+  
Sbjct: 8   MTKKCVTVTPQDNIYEIAVKMKDNDTGFIPVVESEGSDKLIGVVTDRDLVIRGYAAKNSG 67

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + SV+ VM    +    D  +  A +L+ +  I  L V  +  + IGIV   DL
Sbjct: 68  SGSVDTVMTTGIRTASADMSVDQAAELMAEQQIRRLPVT-EGDRLIGIVSIGDL 120



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
             V++VM K    +     +      ++ ++   + VV+     K IG+V   DL+
Sbjct: 2   KKVQEVMTKKCVTVTPQDNIYEIAVKMKDNDTGFIPVVESEGSDKLIGVVTDRDLV 57


>gi|260428383|ref|ZP_05782362.1| CBS domain protein [Citreicella sp. SE45]
 gi|260422875|gb|EEX16126.1| CBS domain protein [Citreicella sp. SE45]
          Length = 173

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 49/119 (41%), Gaps = 4/119 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             +   G  +  +     +  A+ +L +KR G + V D    L GI++E DI R      
Sbjct: 36  HVMEKKGRDVHTIGPDETIGHAVEVLRDKRIGAILVTDAAGHLVGILSERDIVRRLADTP 95

Query: 281 NTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +V ++M  +P+    D  L   ++ +       L V+ +  +  G++   D++
Sbjct: 96  GRTLPQTVAELMTTDPQTCTLDETLVRVLRRMTDGRFRHLPVL-EDGEIAGMISIGDVV 153



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 282 TLSVEDVMIKNPK---VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +V  VM K  +    I  D  +  A+++LR   I  ++V D     +GI+   D++R
Sbjct: 31  EATVGHVMEKKGRDVHTIGPDETIGHAVEVLRDKRIGAILVTDAAGHLVGILSERDIVR 89


>gi|217959778|ref|YP_002338330.1| transcriptional regulator, RpiR family [Bacillus cereus AH187]
 gi|217063170|gb|ACJ77420.1| transcriptional regulator, RpiR family [Bacillus cereus AH187]
          Length = 170

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ ++    R+   G G SG I          TG        +       G++
Sbjct: 6   DTALEQAVKVLQEAS-RIEFYGNGGSGIIAMDAYHKFMRTGISCIAHTDSHFQIMGAGLL 64

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           +++ ++I +S  GS+  L   L  AR     +IAITS  KS ++  ADI L         
Sbjct: 65  SKNSVVIGISHPGSNKRLLEALEIARARGAKIIAITSYQKSALSQLADITLYTSTRETEF 124

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESR 197
               +  +S + QL++ D L + L   R
Sbjct: 125 RTEAS--SSRLAQLSLLDTLYVGLSLQR 150


>gi|311106917|ref|YP_003979770.1| inosine-5'-monophosphate dehydrogenase [Achromobacter xylosoxidans
           A8]
 gi|310761606|gb|ADP17055.1| inosine-5'-monophosphate dehydrogenase [Achromobacter xylosoxidans
           A8]
          Length = 486

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIG-----IIHKNLSADAQAREVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG+KL GI+T  D+   F ++L+   + ++
Sbjct: 95  DPVTVTPQMKVRDAIALQRQHGISGLPVV-EGRKLVGIVTNRDLR--FEENLDQ-PLRNI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPQERLVTMKEGATLEEAQSLMHKHRLERVLIVNDGFELRGLATVKDIVK 201


>gi|83815791|ref|YP_446387.1| CBS domain-containing protein [Salinibacter ruber DSM 13855]
 gi|294508324|ref|YP_003572382.1| hypothetical protein SRM_02509 [Salinibacter ruber M8]
 gi|83757185|gb|ABC45298.1| CBS domain pair, putative [Salinibacter ruber DSM 13855]
 gi|294344652|emb|CBH25430.1| putative CBS domain protein [Salinibacter ruber M8]
          Length = 160

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 4/104 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
                + + I  + ++  G + VV EG  + G+ TE +  ++     +  +   V++VM 
Sbjct: 32  SPTATVFECIGRMVDRDVGSI-VVMEGDAIAGLFTERNYMQSIALEGRSSDETEVQEVMT 90

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           ++   +  D  L   ++L+ +     L VVD+    IGIV   D
Sbjct: 91  EDVATVRPDKPLEECLRLMTRLRCRHLPVVDEGGDLIGIVSIGD 134



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           G             + +  V+   PL + + +++  R   + VVDEG  L GI++ GD
Sbjct: 77  GRSSDETEVQEVMTEDVATVRPDKPLEECLRLMTRLRCRHLPVVDEGGDLIGIVSIGD 134


>gi|327483550|gb|AEA77957.1| Inosine-5'-monophosphate dehydrogenase [Vibrio cholerae LMA3894-4]
          Length = 487

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|294497657|ref|YP_003561357.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294347594|gb|ADE67923.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium QM
           B1551]
          Length = 185

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 77/187 (41%), Gaps = 18/187 (9%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L++++ E    ++L +        +    V  I + K +V +TG G+SG +G   A  + 
Sbjct: 7   LKTVMNELLQTTALIA------DDEAEQLVNGIISSK-KVFVTGAGRSGLMGKSFAMRMM 59

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  ++ +     S       T+DDL+I+ S SG +  L  I   A+     +  +T  
Sbjct: 60  HMGIDAYVIGETVTS-----TFTQDDLLIIGSGSGETKSLIPIAQKAKELGGKVGVVTIS 114

Query: 148 NKSVVACHADIVLTLP----KEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSE 201
             S +   AD ++ LP     + +S    + P  S   Q      DAL +  +E +    
Sbjct: 115 PDSTLGKLADFIVKLPGAPKDQEQSSYQTVQPMASLFEQTLLLFYDALILRFMEKKELDT 174

Query: 202 NDFYVLH 208
           +  Y  H
Sbjct: 175 HTMYGKH 181


>gi|153208932|ref|ZP_01947145.1| CBS domain protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165924095|ref|ZP_02219927.1| CBS domain protein [Coxiella burnetii RSA 334]
 gi|212218742|ref|YP_002305529.1| CBS domain containing protein [Coxiella burnetii CbuK_Q154]
 gi|120575590|gb|EAX32214.1| CBS domain protein [Coxiella burnetii 'MSU Goat Q177']
 gi|165916451|gb|EDR35055.1| CBS domain protein [Coxiella burnetii RSA 334]
 gi|212013004|gb|ACJ20384.1| CBS domain containing protein [Coxiella burnetii CbuK_Q154]
          Length = 144

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
                + +A   + +   G + V  E  KL G +T+ DI  +     KD    ++ DVM 
Sbjct: 15  PPTSSVKEAAKKMKQLDCGFIPV-GENDKLIGTVTDRDIVLHAAAQGKDPGNTALRDVMS 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +   E+  L  A + + +  I  L+V++D ++  GI+   D+ R
Sbjct: 74  EGVEYCYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIAR 120



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V++VM K P  +   + +  A + ++Q +   + V  +  K IG V   D++
Sbjct: 1   MQVKEVMSKKPAYLPPTSSVKEAAKKMKQLDCGFIPV-GENDKLIGTVTDRDIV 53



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDV 288
                 L +A   +  K+   + V+++ +++ GI++ GDI  R+   DL   +VE +
Sbjct: 79  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIARRSQDDDLCAQAVEGI 135


>gi|52143190|ref|YP_083639.1| RpiR family transcriptional regulator [Bacillus cereus E33L]
 gi|51976659|gb|AAU18209.1| transcriptional regulator, RpiR family [Bacillus cereus E33L]
          Length = 176

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 3/148 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                 AV+ ++    R+   G G SG I +        TG        +        ++
Sbjct: 12  DTALEQAVKALQEA-NRIEFYGNGGSGIIATDAYHKFMRTGISCIAHTDSHFQIMGAALL 70

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           +++ ++I +S SGS+  L   L  A+     +IAITS  KS ++   DI L         
Sbjct: 71  SKNSVVIGISHSGSNKGLLEALEVAKARGAKIIAITSYQKSALSQLTDITLYTSTRETEF 130

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLESR 197
               +  +S + QL++ D L + L   R
Sbjct: 131 RTEAS--SSRLAQLSLIDTLYVGLSLQR 156


>gi|58581817|ref|YP_200833.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84623719|ref|YP_451091.1| inositol-5-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188576627|ref|YP_001913556.1| inosine 5'-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae PXO99A]
 gi|58426411|gb|AAW75448.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae KACC10331]
 gi|84367659|dbj|BAE68817.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae MAFF 311018]
 gi|188521079|gb|ACD59024.1| inosine-5'-monophosphate dehydrogenase [Xanthomonas oryzae pv.
           oryzae PXO99A]
          Length = 485

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LA+A+ +           L P  + G +                
Sbjct: 41  KLPILSAAMDTVTEHRLAVAMAQLGGIGIIH-KNLTPQQQSGEVARVKKFESGVITEPFT 99

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V+    + + + +   +    V VVD G +L GI+T  D+   F K L+   V  +M K 
Sbjct: 100 VRPDTTIGEVLALTRARNISGVPVVD-GSELVGIVTSRDMR--FEKKLDD-PVRHIMTKK 155

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E       ++LL ++ I  ++VV+   +  G++   D+ + 
Sbjct: 156 DRLITVREGASDEEVLELLHRNRIEKVLVVNHSFELRGLITVKDIQKK 203


>gi|14325027|dbj|BAB59953.1| inosine-5 -monophosphate dehydrogenase [Thermoplasma volcanium
           GSS1]
          Length = 355

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 S + +   + P +     +++A+ ++ +     + V D+  KL GII+  DI +
Sbjct: 50  RSIQVKSKISNYAINTPTLSADDDVLEAVRLIKDTGLSALPVFDK-GKLVGIISRTDIIK 108

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              K  D++ L    +M  +P  + ED  +  A   LRQ N   + VVD+ ++ +GIV  
Sbjct: 109 RIDKISDISNLRAFQIMSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKL 168

Query: 333 LDLLRFGII 341
            D+L  GI+
Sbjct: 169 NDIL--GIM 175



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V +       ++ ++E     + V+D G +  G+IT  D+ +     + +  +
Sbjct: 1   MTPDPVTVGVDDTFSKVMSKMNETGIHQLPVMD-GNRYAGMITYSDLLKKRSIQVKS-KI 58

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  I  P  +  D  +  A++L++   +S L V D   K +GI+   D+++
Sbjct: 59  SNYAINTP-TLSADDDVLEAVRLIKDTGLSALPVFDK-GKLVGIISRTDIIK 108



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---- 276
                       V     + +A   L +     + VVD  ++L GI+   DI        
Sbjct: 120 RAFQIMSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKLNDILGIMFREK 179

Query: 277 ---------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                     K+   ++   VM   P  +     +   +  + ++ + ++ +VD   K +
Sbjct: 180 EKIKYGGYGEKERVQIACGSVMDP-PISVDRYADVKTVVDEMMKNELHIMPIVD-SGKLV 237

Query: 328 GIVHFLDLL 336
           GI+ F DL+
Sbjct: 238 GIIDFSDLI 246


>gi|119775470|ref|YP_928210.1| putative sugar-phosphate nucleotide transferase [Shewanella
           amazonensis SB2B]
 gi|119767970|gb|ABM00541.1| putative sugar-phosphate nucleotide transferase [Shewanella
           amazonensis SB2B]
          Length = 352

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKN 292
                + +A+ I++ +      VVD+ + L G++T+GDI R   K+L+    +  VM  N
Sbjct: 11  SATSTIREALEIINREALRVALVVDKDRNLVGVVTDGDIRRGLLKNLSLSDGIALVMNTN 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           P      T     ++L+++  I  + ++    K +G+    
Sbjct: 71  PTTAESGTPKQDLVELMQRKGIISVPLL-KNGKIVGLETLQ 110



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 26/48 (54%), Gaps = 1/48 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             +   + +  A++++ +  + V +VVD  +  +G+V   D+ R G++
Sbjct: 8   VTLSATSTIREALEIINREALRVALVVDKDRNLVGVVTDGDI-RRGLL 54


>gi|110634581|ref|YP_674789.1| CBS domain-containing protein [Mesorhizobium sp. BNC1]
 gi|110285565|gb|ABG63624.1| CBS domain containing membrane protein [Chelativorans sp. BNC1]
          Length = 232

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 47/132 (35%), Gaps = 20/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                  V     +  A  I+ +     + V+ +  +L GIITEGD+ R           
Sbjct: 7   MSTRCVTVSAENSIKHAAQIMLDHDLSGLPVLADDGRLVGIITEGDLLRRCELGNVKAGE 66

Query: 280 -------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                         +   V  VM  +   + ED       +L+ +H I  + V+    + 
Sbjct: 67  ELLPEKRARGYLHGHGWKVGHVMSPDVVAVTEDASADHIAELMARHGIKRVPVL-RGDRV 125

Query: 327 IGIVHFLDLLRF 338
           +GIV   DLL+ 
Sbjct: 126 VGIVSRRDLLKL 137



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +D+M      +  +  +  A Q++  H++S L V+ D  + +GI+   DLLR
Sbjct: 1   MRAKDLMSTRCVTVSAENSIKHAAQIMLDHDLSGLPVLADDGRLVGIITEGDLLR 55


>gi|269126481|ref|YP_003299851.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
 gi|268311439|gb|ACY97813.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
          Length = 142

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 50/111 (45%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    + + +  L+E   G V V  +G  + GI++E D+ R  H+    L    V D+M
Sbjct: 17  VEPTATVRELLAKLAELNIGAVVVSPDGATIAGIVSERDVVRRLHERGAALLDAPVSDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               +    +  +    + + +H I  + VV    + +G+V   D+++  I
Sbjct: 77  TAEVRTCAPEAAVDELRKTMTEHRIRHVPVV-SGGRMVGLVSIGDVVKSAI 126


>gi|218895774|ref|YP_002444185.1| CBS domain protein [Bacillus cereus G9842]
 gi|218540734|gb|ACK93128.1| CBS domain protein [Bacillus cereus G9842]
          Length = 139

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  +  +  A +L+ Q+ I  L VVD   + IG++   DL
Sbjct: 67  KITNVMTTNIISVSPNDSIEKATELMAQYQIRRLPVVD-SGQLIGMLALGDL 117



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D+M  +         +  A   +++ ++ ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TQVRDLMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|15643592|ref|NP_228638.1| hypothetical protein TM0829 [Thermotoga maritima MSB8]
 gi|4981361|gb|AAD35911.1|AE001750_5 conserved hypothetical protein [Thermotoga maritima MSB8]
          Length = 150

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     +   I +LS +    V VVD   ++ G ++E D+ +                  
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPD 73

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +    V + M K P V+ ED  L VA   L +H    L VVD+  + +GI
Sbjct: 74  TNQLIRNVVKIKDRPVSEFMNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGI 133

Query: 330 VHFLDLLR 337
           V  +D+LR
Sbjct: 134 VRRIDILR 141



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ED  +   ++LL + N+S + VVD   + +G V   DL++ 
Sbjct: 14  VFEDETVETVIKLLSRQNLSGVPVVDHDMRVVGFVSESDLIKA 56



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 23/54 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                 +VK   PLI A   L    F  + VVDE  +L GI+   DI R   + 
Sbjct: 93  MNKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDEAMQLVGIVRRIDILRVVSEG 146


>gi|322805662|emb|CBZ03227.1| sialic acid utilization regulator, RpiR family [Clostridium
           botulinum H04402 065]
          Length = 281

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 79/190 (41%), Gaps = 5/190 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           + K  T   + +  N ++   +  +    + + ++  + +     +   AV+ IK  +  
Sbjct: 75  YTKESTEFDYIINYNDSIDSIINKLGN--KMIDTINDTKELVDDEKLLEAVKAIKNAET- 131

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +       L        F   +         IT  D+ + +S+SG++ E
Sbjct: 132 IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHITNRDVAVAISYSGNTRE 191

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +   +  A++     IAIT   KS+++  ADI L +P   +    G    +S   QL + 
Sbjct: 192 VNLAVEEAQKNGATTIAITKCGKSILSNIADINLNIPSIEKDLRIGAI--SSRTSQLFVT 249

Query: 187 DALAIALLES 196
           D+L + + + 
Sbjct: 250 DSLFLGIAKE 259


>gi|305662873|ref|YP_003859161.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304377442|gb|ADM27281.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 388

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKN 292
               +  AI  +   R   V VV+    + GI++  ++ R  ++   L  + VE +M   
Sbjct: 77  EDTDIDRAIASIVNWRAREVPVVNAKGIVIGIVSRNNVLRYVYERGLLPRIRVETIMSSP 136

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  I +D  +  A  L+ +  IS L V+DD +K +G++   D++
Sbjct: 137 PITINKDESIARARWLMNKSGISRLPVLDDNEKIVGVITLSDII 180



 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/137 (18%), Positives = 50/137 (36%), Gaps = 16/137 (11%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF- 276
                          +     +  A  ++++     + V+D+ +K+ G+IT  DI     
Sbjct: 125 PRIRVETIMSSPPITINKDESIARARWLMNKSGISRLPVLDDNEKIVGVITLSDIIEKIF 184

Query: 277 ---------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                           +      V + M   P V   D  +  AM++L  +NIS + +  
Sbjct: 185 SIRLSRRKGYEWIQSEESFLAAPVSEFMSSPPIVAPPDIDVYKAMEILLNNNISGIPITR 244

Query: 322 DCQKAIGIVHFLDLLRF 338
              + IG++  +D+LR 
Sbjct: 245 GDDRVIGVLSGIDILRK 261



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 26/57 (45%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +V  +  +   +      +   +  ++++ +  + VVDD  + IGI+ +  +   G+
Sbjct: 3   TVISIASEPKILAKPSMRIGEIVPKMKEYGVKEIPVVDDDNRIIGILSYRRIAVKGV 59


>gi|302390934|ref|YP_003826754.1| hypothetical protein Acear_0138 [Acetohalobium arabaticum DSM 5501]
 gi|302203011|gb|ADL11689.1| CBS domain containing protein [Acetohalobium arabaticum DSM 5501]
          Length = 257

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 50/111 (45%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + +A  I++    G + V D+  K+ G+IT+GD+ +   +    L V
Sbjct: 7   MIKDVITVNENVTISEAERIMTVNDIGRLIVEDDLGKVVGMITDGDLVK---ERNFDLKV 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++M  +     +   +    Q++  + I  + + D+    +GIV   D++
Sbjct: 64  KEIMTTDLIKGYQTQSIQEVAQIVSDNQIGGVPIFDETDNLVGIVTVDDIV 114



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 34/54 (62%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+MIK+   + E+  ++ A +++  ++I  L+V DD  K +G++   DL++ 
Sbjct: 3   VKDIMIKDVITVNENVTISEAERIMTVNDIGRLIVEDDLGKVVGMITDGDLVKE 56



 Score = 36.4 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 25/49 (51%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            + +   I+S+ + G V + DE   L GI+T  DI   + K+ NT  + 
Sbjct: 79  SIQEVAQIVSDNQIGGVPIFDETDNLVGIVTVDDIVSGYMKEENTAKIS 127


>gi|302389431|ref|YP_003825252.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermosediminibacter oceani DSM 16646]
 gi|302200059|gb|ADL07629.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermosediminibacter oceani DSM 16646]
          Length = 432

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 48/102 (47%), Gaps = 5/102 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + D   +L   R     VV+   ++ GI+T  D+        + L + ++M KNP V+
Sbjct: 205 STVGDWRKLLRATRHSRFPVVNSDGEVIGIVTTNDV----ADLKDELPIVEIMTKNPIVV 260

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             DT +  A  L+    I ++ VV + +K +G++   D +R 
Sbjct: 261 SPDTPVAHAAHLMVWEGIELIPVV-EGRKLVGVISRQDAIRA 301



 Score = 36.0 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 1/65 (1%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     +  +V    P+  A  ++  +    + VV EG+KL G+I+  D  R F      
Sbjct: 250 VEIMTKNPIVVSPDTPVAHAAHLMVWEGIELIPVV-EGRKLVGVISRQDAIRAFRSLSFQ 308

Query: 283 LSVED 287
             V +
Sbjct: 309 PQVAE 313


>gi|288920574|ref|ZP_06414879.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
 gi|288347995|gb|EFC82267.1| CBS domain containing membrane protein [Frankia sp. EUN1f]
          Length = 216

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 53/127 (41%), Gaps = 14/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------FRNF 276
               + +V    P+ D   +L+ +  G V VV    +L GI+TE D            + 
Sbjct: 7   MTRKLSIVTPDVPVKDVARLLALRGIGAVPVVSAQGELVGIVTEADFIALEARPDSRLHA 66

Query: 277 HKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +D N       +V ++M         DT +   + ++   +IS + ++D+    +GI+ 
Sbjct: 67  RRDRNPRPAAPGTVGELMSSPVVTARVDTDIADIVGVMLAQHISRVPILDEAGMLVGIIS 126

Query: 332 FLDLLRF 338
             DLLR 
Sbjct: 127 RSDLLRL 133



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++M +   ++  D  +    +LL    I  + VV    + +GIV   D +
Sbjct: 1   MRAGELMTRKLSIVTPDVPVKDVARLLALRGIGAVPVVSAQGELVGIVTEADFI 54



 Score = 39.1 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              ++M S      V     + D + ++  +    V ++DE   L GII+  D+ R   +
Sbjct: 79  TVGELMSSPVVTARV--DTDIADIVGVMLAQHISRVPILDEAGMLVGIISRSDLLRLLAR 136

Query: 279 DLNTLSVEDV 288
             +    +DV
Sbjct: 137 P-DQTVAQDV 145


>gi|206561389|ref|YP_002232154.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia cenocepacia J2315]
 gi|198037431|emb|CAR53366.1| glucokinase [Burkholderia cenocepacia J2315]
          Length = 642

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|167757722|ref|ZP_02429849.1| hypothetical protein CLOSCI_00052 [Clostridium scindens ATCC 35704]
 gi|167664604|gb|EDS08734.1| hypothetical protein CLOSCI_00052 [Clostridium scindens ATCC 35704]
          Length = 484

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMPIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GIIT  D+   F +D +    E +
Sbjct: 96  DPFYLSPEHTLEDANNLMAKFRISGVPIT-EGKKLVGIITNRDLK--FEEDFSKKIKESM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 153 TSEGLITAPEGITLDEAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|52549993|gb|AAU83842.1| hypothetical protein GZ34G5_5 [uncultured archaeon GZfos34G5]
          Length = 134

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+ + + IL  K    +AV     +  G+I+E D+ +   KD ++L+ 
Sbjct: 16  MTRGVITVSHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDVIKFMDKDWDSLTA 75

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLLRF 338
           EDVM    + +  +T L  A   + + NI  L+V+         IGI+   D+LR 
Sbjct: 76  EDVMSHFVRAVDPETTLRKAADTMNELNIHRLLVLSLSPAPGVPIGILSASDILRA 131



 Score = 43.7 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 31/58 (53%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +VM +    +  DT +   +++L + +IS + V     +A+G++  +D+++F
Sbjct: 8   KEKKVREVMTRGVITVSHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDVIKF 65


>gi|75675216|ref|YP_317637.1| hypothetical protein Nwi_1023 [Nitrobacter winogradskyi Nb-255]
 gi|74420086|gb|ABA04285.1| IMP dehydrogenase [Nitrobacter winogradskyi Nb-255]
          Length = 243

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 51/143 (35%), Gaps = 26/143 (18%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                    +  VK   P+++A  ++ E     + VVD+  +L GI++E D  R      
Sbjct: 2   RTHQIMTHKLITVKADTPIVEAAKLMLESHISGLPVVDDAGRLLGIVSESDFMRRSEIGT 61

Query: 281 NTL------------------------SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNIS 315
           +                           V  +M +       ED  L   ++L+ + NI 
Sbjct: 62  HGPRIRWLDFLMGTEKAAIDFVREHGRKVSAIMTRETLFTATEDMPLEELVRLMERQNIK 121

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            L V+      +GIV   DLLR 
Sbjct: 122 RLPVI-RGDLLVGIVTRADLLRA 143



 Score = 36.0 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 4/76 (5%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    + + +++       PL + + ++  +    + V+  G  L GI+T  D+ R
Sbjct: 84  REHGRKVSAIMTRETLFTATEDMPLEELVRLMERQNIKRLPVI-RGDLLVGIVTRADLLR 142

Query: 275 N---FHKDLNTLSVED 287
                 +D+   + +D
Sbjct: 143 AVASLARDVPDPTADD 158


>gi|302518377|ref|ZP_07270719.1| transcriptional regulator [Streptomyces sp. SPB78]
 gi|318056378|ref|ZP_07975101.1| transcriptional regulator [Streptomyces sp. SA3_actG]
 gi|318075721|ref|ZP_07983053.1| transcriptional regulator [Streptomyces sp. SA3_actF]
 gi|302427272|gb|EFK99087.1| transcriptional regulator [Streptomyces sp. SPB78]
          Length = 305

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL-----------QGELSFQFHCAVEKI 60
           +      ++N   Q A +  I+E+  L+ +   +           + +L           
Sbjct: 90  SAAAREDVRNKDSQWATKGDISEEDSLAQVVDKIIYNESGTLEDTRAQLDLDVLARAVDA 149

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A   R+ I G+G SG +G  L   L   G  +F      A+     ++   D+ I +S 
Sbjct: 150 VAAARRIDIFGLGASGFVGGDLHQKLHRIGHMAFVWTDGHAALTASALLGEGDVAIGISH 209

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +GS+ +    L  A       IA+T+  +S +A  AD+VLT          G   T S I
Sbjct: 210 TGSTVDTLEPLQAAGERGATTIALTNFARSPMAECADLVLTTAVREMPFRSGA--TASRI 267

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
            QLA+ D L + + + ++++E+   +    G +  L   
Sbjct: 268 AQLAVVDCLFVGVAQ-KSYAESTAALARTYGAVRHLRGR 305


>gi|107022044|ref|YP_620371.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia cenocepacia AU 1054]
 gi|116688988|ref|YP_834611.1| glucokinase [Burkholderia cenocepacia HI2424]
 gi|170732278|ref|YP_001764225.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Burkholderia cenocepacia MC0-3]
 gi|254246074|ref|ZP_04939395.1| Glucokinase [Burkholderia cenocepacia PC184]
 gi|119370096|sp|Q1BYA7|GLK_BURCA RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|105892233|gb|ABF75398.1| glucokinase [Burkholderia cenocepacia AU 1054]
 gi|116647077|gb|ABK07718.1| glucokinase [Burkholderia cenocepacia HI2424]
 gi|124870850|gb|EAY62566.1| Glucokinase [Burkholderia cenocepacia PC184]
 gi|169815520|gb|ACA90103.1| glucokinase [Burkholderia cenocepacia MC0-3]
          Length = 642

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|319400117|gb|EFV88353.1| 3-hexulose-6-phosphate isomerase [Staphylococcus epidermidis
           FRI909]
          Length = 182

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+++L    + ++      +     R+   G G+SG + +  A  L   G  ++ V 
Sbjct: 11  LEELDATLSQVDNTEYERFSNDVIGAD-RIFTAGKGRSGFVANSFAMRLNQLGKNAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+   S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSVGAKIVLLTTNADSPIGNLAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 125 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSIVLPLMDAFHISEKAMQENH 178


>gi|89054473|ref|YP_509924.1| inosine-5'-monophosphate dehydrogenase [Jannaschia sp. CCS1]
 gi|88864022|gb|ABD54899.1| inosine-5'-monophosphate dehydrogenase [Jannaschia sp. CCS1]
          Length = 482

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 60/167 (35%), Gaps = 13/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       +AIA+ ++         V+H    +         V         
Sbjct: 39  NIPLLSSAMDTVTEGRMAIAMAQAGG-----MGVIHRNLDVDQQAREVRRVKRFESGIVY 93

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L DA +++    F    VVDE +++ GI+T  D+        +   V+ +
Sbjct: 94  NPVTLTPDQTLADAKSLMERYGFSGFPVVDETRRVLGIVTNRDMRFAAD---DATPVQAM 150

Query: 289 MIKNPKVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M  +   I  E      A+ L++   I  L++ D      G++   D
Sbjct: 151 MTADDLAILREPADRDEAISLMKARRIEKLLITDGQGALTGLLTLKD 197



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L+ ++  S   VVD+ ++ +GIV   D+
Sbjct: 94  NPVTLTPDQTLADAKSLMERYGFSGFPVVDETRRVLGIVTNRDM 137


>gi|83814945|ref|YP_446606.1| CBS domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83756339|gb|ABC44452.1| CBS domain pair protein [Salinibacter ruber DSM 13855]
          Length = 175

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 20/122 (16%), Positives = 42/122 (34%), Gaps = 4/122 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH- 277
                +     +        + + I  + ++  G + +  E  ++ GI TE D  R+   
Sbjct: 31  RTKGTLQQNGDVLTATPTDTVYECIDAMVDRGIGSIVIT-EDDEMVGIFTERDYMRDIAL 89

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      V++VM ++      +  L   +  +       L VVDD      I+   D 
Sbjct: 90  KGRSSPETEVQEVMTEDVVTAEAEDQLRDCLDRMNDLQCRHLPVVDDEGNLADIISMRDC 149

Query: 336 LR 337
            +
Sbjct: 150 AK 151


>gi|296104182|ref|YP_003614328.1| inosine 5'-monophosphate dehydrogenase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058641|gb|ADF63379.1| inosine 5'-monophosphate dehydrogenase [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 488

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 56/170 (32%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    S ++      
Sbjct: 41  NIPMLSAAMDTVTEARLAIALAQEGGIGFIHKNMSIERQAEEVRRVKKHESGIV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M 
Sbjct: 98  QTVLPTTTLHEVKALTERNGFAGYPVVTEENELVGIITGRDVR--FVTDLNQ-PVSVYMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     V    + +  +   +VVD      G++   D  + 
Sbjct: 155 PKERLVTVREGEARDVVFAKMHEKRVEKALVVDANFHLRGMITVKDFQKA 204


>gi|269965033|ref|ZP_06179198.1| hypothetical protein VMC_06280 [Vibrio alginolyticus 40B]
 gi|269830336|gb|EEZ84561.1| hypothetical protein VMC_06280 [Vibrio alginolyticus 40B]
          Length = 283

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNTLSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSPEDVQIAISFSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
                       H  +   S   Q  I D L I L++ R+
Sbjct: 227 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRD 264


>gi|91223005|ref|ZP_01258271.1| hypothetical protein V12G01_04161 [Vibrio alginolyticus 12G01]
 gi|91191818|gb|EAS78081.1| hypothetical protein V12G01_04161 [Vibrio alginolyticus 12G01]
          Length = 264

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 89  DAMFQTTNTLSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 147

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 148 SHVQIAVARTLSPEDVQIAISFSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADI 207

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
                       H  +   S   Q  I D L I L++ R+
Sbjct: 208 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRD 245


>gi|297617530|ref|YP_003702689.1| diguanylate cyclase [Syntrophothermus lipocalidus DSM 12680]
 gi|297145367|gb|ADI02124.1| diguanylate cyclase [Syntrophothermus lipocalidus DSM 12680]
          Length = 289

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     +  A+ ++   + G + VV E   L GI+T  D+  +    L    V
Sbjct: 8   MVRDPVTVSPDASVARAVQLMQRFKVGGLPVVQE-GMLVGILTSRDVRNSHPNRL----V 62

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D M +    I  D  +  A + + ++ I  L VV+   + +GI+ 
Sbjct: 63  ADAMTREVITISPDCSIWEAKEKIDRYCIERL-VVEAEGRLLGIIT 107



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +++ +M+++P  +  D  +  A+QL+++  +  L VV      +GI+   D
Sbjct: 3   TLKSIMVRDPVTVSPDASVARAVQLMQRFKVGGLPVV-QEGMLVGILTSRD 52


>gi|260771388|ref|ZP_05880313.1| inosine-5'-monophosphate dehydrogenase [Vibrio furnissii CIP
           102972]
 gi|260613514|gb|EEX38708.1| inosine-5'-monophosphate dehydrogenase [Vibrio furnissii CIP
           102972]
 gi|315180968|gb|ADT87882.1| inosine-5'-monophosphate dehydrogenase [Vibrio furnissii NCTC
           11218]
          Length = 487

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  +    + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAEVRQVKKFEAGVV---TDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D I +  +  F    VV E  +L GIIT  D+   F  DL+   V  VM 
Sbjct: 98  VTVSPDATIADVIALTEKHGFAGFPVVTESHELVGIITGRDVR--FVTDLSK-KVSVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E    T   + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLASVKEGATRTEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|238061934|ref|ZP_04606643.1| CBS domain-containing protein [Micromonospora sp. ATCC 39149]
 gi|237883745|gb|EEP72573.1| CBS domain-containing protein [Micromonospora sp. ATCC 39149]
          Length = 141

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMI 290
                L +A  ++ E   G V V D G  L G++T+ DI  R   +  D    ++  ++ 
Sbjct: 18  PAETTLDEAARVMKESDIGDVVVTD-GATLAGMLTDRDIVVRAVAERSDPAATTIGSIVT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +I + +    A  L+R+  I  ++V D  +K +GIV   DL
Sbjct: 77  REVVMIEQHSTAGEAAALMRERGIRRVLVCDSERKLVGIVSLGDL 121



 Score = 43.7 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM K    +  +T L  A +++++ +I  ++V D      G++   D++
Sbjct: 6   VSDVMTKQVVYLPAETTLDEAARVMKESDIGDVVVTDGA-TLAGMLTDRDIV 56



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 26/61 (42%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + +++      +A  ++ E+    V V D  +KL GI++ GD+      +     + 
Sbjct: 76  TREVVMIEQHSTAGEAAALMRERGIRRVLVCDSERKLVGIVSLGDLAMQLDPNSALSDIS 135

Query: 287 D 287
           +
Sbjct: 136 E 136


>gi|186476072|ref|YP_001857542.1| inosine 5'-monophosphate dehydrogenase [Burkholderia phymatum
           STM815]
 gi|184192531|gb|ACC70496.1| inosine-5'-monophosphate dehydrogenase [Burkholderia phymatum
           STM815]
          Length = 486

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 60/167 (35%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEARLAIAMAQMGGVGIIH-KNLTPAEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG +L GI+T  D+   F   L+   V  +M   
Sbjct: 99  VPPQMKVSDVIALSRQHGISGFPVV-EGAQLIGIVTNRDLR--FETRLDE-PVRTIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVKEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|147677136|ref|YP_001211351.1| hypothetical protein PTH_0801 [Pelotomaculum thermopropionicum SI]
 gi|146273233|dbj|BAF58982.1| hypothetical protein [Pelotomaculum thermopropionicum SI]
          Length = 281

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 51/111 (45%), Gaps = 6/111 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V I   +  A  ++ +   G + V+++  KL GIIT  D+ R          V
Sbjct: 8   MSRPVITVDILDSVAKAALLMEKHGIGGLPVLNDD-KLCGIITSRDVRRA----HPNRIV 62

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D M KN   +  +  L  AM ++ +  +  L V++DC + +GI+   D+L
Sbjct: 63  ADAMSKNVISVNSNESLLNAMNIIGEKKVERLPVLEDC-RLVGIITKTDIL 112



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V D+M +    +     +  A  L+ +H I  L V++D  K  GI+   D+ R 
Sbjct: 2   LRVSDIMSRPVITVDILDSVAKAALLMEKHGIGGLPVLNDD-KLCGIITSRDVRRA 56


>gi|30250323|ref|NP_842393.1| CBS domain-containing protein [Nitrosomonas europaea ATCC 19718]
 gi|30181118|emb|CAD86310.1| CBS domain [Nitrosomonas europaea ATCC 19718]
          Length = 146

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 54/125 (43%), Gaps = 6/125 (4%)

Query: 217 FVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 ++       + +     + +A+  ++    G + V+ + +KL GI+TE D  R 
Sbjct: 1   MKTVKHLLQEKGHTVVAIGPDDSVFNAMQKMAADNIGALLVM-KDEKLVGILTERDFSRK 59

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                K +    V+++M +    +  +      M L+ +  +  L V+DD  K IG++  
Sbjct: 60  SYLLDKPVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD-GKVIGLLSI 118

Query: 333 LDLLR 337
            DL++
Sbjct: 119 GDLVK 123


>gi|83944496|ref|ZP_00956949.1| inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp. EE-36]
 gi|83844698|gb|EAP82582.1| inosine-5'-monophosphate dehydrogenase [Sulfitobacter sp. EE-36]
          Length = 482

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 64/165 (38%), Gaps = 9/165 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+ ++        +  +     ++  +    S ++++  ++
Sbjct: 39  NIPLLSSAMDTVTESRMAIAMAQAGGMGVIHRNLTIDEQSKEVRRVKRFESGIVYNPITL 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    L DA  +    R     VVDE  ++ GI+T  D+        +   V  +M 
Sbjct: 99  ---RPDQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDMRFASD---DATPVRLMMS 152

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             N  ++ E      A+ L++   I  L+V D   K  G++   D
Sbjct: 153 SDNLALLQEPADRDEAISLMKARRIEKLLVTDATGKLTGLLTLKD 197



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 22/44 (50%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  D  L  A  L  ++ ++   VVD+  + +GIV   D+
Sbjct: 94  NPITLRPDQTLADAKALQERYRVTGFPVVDEAGRVVGIVTNRDM 137


>gi|258423977|ref|ZP_05686860.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9635]
 gi|257845831|gb|EEV69862.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus A9635]
          Length = 182

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +   HG A P  S   Q +    D++ + L+   N SE      H
Sbjct: 125 TNIVLPAGTKYDEHGSAQPLGSLYEQASQLFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|78065540|ref|YP_368309.1| glucokinase [Burkholderia sp. 383]
 gi|119370098|sp|Q39IQ1|GLK_BURS3 RecName: Full=Bifunctional protein glk; Includes: RecName:
           Full=Glucokinase; AltName: Full=Glucose kinase;
           Includes: RecName: Full=Putative HTH-type
           transcriptional regulator
 gi|77966285|gb|ABB07665.1| glucokinase [Burkholderia sp. 383]
          Length = 642

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSAILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LDVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|169831986|ref|YP_001717968.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169638830|gb|ACA60336.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 181

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRN 275
               +        +  V++   +   + I     F  V VV  E     GII++ D++RN
Sbjct: 1   MDSVTVKDIMTTRVVTVEMDDSIGLILEIFKHAGFHHVLVVSPETGAFVGIISDRDVYRN 60

Query: 276 F----------HKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                       +D NTL      +M +N     ED  +  A +L+  + IS L V+   
Sbjct: 61  VSCFIGTLSEQARDQNTLRKKAHHIMTRNLITATEDMTVKQAAELMLANKISCLPVLCAD 120

Query: 324 QKAIGIVHFLDLLRF 338
           +   GIV + DLLR+
Sbjct: 121 RTIRGIVTWKDLLRY 135


>gi|163851685|ref|YP_001639728.1| CBS domain-containing protein [Methylobacterium extorquens PA1]
 gi|218530491|ref|YP_002421307.1| signal transduction protein with CBS domains [Methylobacterium
           chloromethanicum CM4]
 gi|240138851|ref|YP_002963326.1| hypothetical protein MexAM1_META1p2261 [Methylobacterium extorquens
           AM1]
 gi|254561457|ref|YP_003068552.1| hypothetical protein METDI3043 [Methylobacterium extorquens DM4]
 gi|163663290|gb|ABY30657.1| CBS domain containing protein [Methylobacterium extorquens PA1]
 gi|218522794|gb|ACK83379.1| putative signal transduction protein with CBS domains
           [Methylobacterium chloromethanicum CM4]
 gi|240008823|gb|ACS40049.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
           extorquens AM1]
 gi|254268735|emb|CAX24696.1| conserved hypothetical protein with 2 CBS domains [Methylobacterium
           extorquens DM4]
          Length = 143

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
                + +AI +L+EKR G + V D   ++ GI++E D+ R    +        +   M 
Sbjct: 18  PPHRTIDEAIHLLAEKRIGALVVGDAEGRVIGILSERDVMRALASEGASALDRPISHHMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                      +   M+ + +     L VV++  + +G+V   D+++  I
Sbjct: 78  TKVVTCTRRASIEDVMETMTEGRFRHLPVVEE-GRLVGVVSIGDVVKRRI 126



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 21/45 (46%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     +  A+ LL +  I  L+V D   + IGI+   D++R 
Sbjct: 15  VTLPPHRTIDEAIHLLAEKRIGALVVGDAEGRVIGILSERDVMRA 59



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           H    +        + D +  ++E RF  + VV E  +L G+++ GD+ + 
Sbjct: 75  HMTTKVVTCTRRASIEDVMETMTEGRFRHLPVV-EEGRLVGVVSIGDVVKR 124


>gi|83309980|ref|YP_420244.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82944821|dbj|BAE49685.1| CBS domain [Magnetospirillum magneticum AMB-1]
          Length = 130

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 54/119 (45%), Gaps = 4/119 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           + + G +I  V     L +A ++L EK  G +   D    + GI++E DI R F +   D
Sbjct: 8   LAYKGQTIHTVAPSASLREAASLLLEKNIGALICADRAGGIVGILSERDISRAFARLGAD 67

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++SV D M ++         +   + ++ +     + VV    +  G+V   DL++ 
Sbjct: 68  MISMSVGDAMTRDVIACAASDSVAEILDIMTETRCRHIPVV-QDGEPRGLVSIGDLVKA 125


>gi|40890003|pdb|1VIM|A Chain A, Crystal Structure Of An Hypothetical Protein
 gi|40890004|pdb|1VIM|B Chain B, Crystal Structure Of An Hypothetical Protein
 gi|40890005|pdb|1VIM|C Chain C, Crystal Structure Of An Hypothetical Protein
 gi|40890006|pdb|1VIM|D Chain D, Crystal Structure Of An Hypothetical Protein
          Length = 200

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 77/187 (41%), Gaps = 15/187 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           LR +      + +L + +  E   +    ++  ++    + + G G+SG+I    A  L 
Sbjct: 15  LRFLEVVSEHIKNLRNHIDLETVGEMIKLIDSARS----IFVIGAGRSGYIAKAFAMRLM 70

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + V            IT  D+++ +S SG +  +  I   A+     L+A+T +
Sbjct: 71  HLGYTVYVVGETVTP-----RITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGK 125

Query: 148 NKSVVACHADIVLTL----PKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSE 201
             S +A  AD+V+ +     +E +     LAP  +      +   DAL   ++  ++ +E
Sbjct: 126 RDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTE 185

Query: 202 NDFYVLH 208
            D    H
Sbjct: 186 KDLEARH 192


>gi|297625443|ref|YP_003687206.1| transcriptional regulator [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296921208|emb|CBL55758.1| Transcriptional regulator [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 329

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 45/193 (23%), Positives = 67/193 (34%), Gaps = 6/193 (3%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
             H  S   +G     +S    A +    E R +    S L      +   A+    A +
Sbjct: 124 VEHELSGVARGRIDASDSLHDLAHKIGFHEARSIEDTVSGLDLTCLDEVAHAI----AAR 179

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             V + G+G SG +   L   L   G    F            M T  D++I +S+SG +
Sbjct: 180 RPVTVLGVGASGLVAEDLCQKLQRIGQQCQFTSDTHLQLVQAAMRTPQDVVIGISFSGRT 239

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E    L  A       +AIT    S +      VLT     +    G     S + QLA
Sbjct: 240 VETHKALALAANAGALSVAITGNPDSPIGQVVSHVLTTTAREDELRIGAL--ASRMAQLA 297

Query: 185 IGDALAIALLESR 197
           + D L   + + R
Sbjct: 298 VVDVLFARIAQLR 310


>gi|154150815|ref|YP_001404433.1| hypothetical protein Mboo_1272 [Candidatus Methanoregula boonei
           6A8]
 gi|153999367|gb|ABS55790.1| protein of unknown function DUF39 [Methanoregula boonei 6A8]
          Length = 502

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 45/99 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V  G  +  A   L +     + V+    +L GIIT  DI +         +V D+M K 
Sbjct: 390 VSEGEEIQTAAQKLLKGETNHLPVIGRDGRLAGIITTFDISKAVANPGKASTVGDIMKKK 449

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 D  + VA++ L Q+NIS L V+D  +  IG++ 
Sbjct: 450 VVTTTTDEAVDVAVRKLEQNNISALPVLDADRHVIGMLT 488



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 26/63 (41%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            H+  +   V D+M +    + E   +  A Q L +   + L V+    +  GI+   D+
Sbjct: 370 MHETTSGPRVLDIMDRQVVSVSEGEEIQTAAQKLLKGETNHLPVIGRDGRLAGIITTFDI 429

Query: 336 LRF 338
            + 
Sbjct: 430 SKA 432


>gi|90021345|ref|YP_527172.1| acetoin utilization protein AcuB [Saccharophagus degradans 2-40]
 gi|89950945|gb|ABD80960.1| CBS domain protein [Saccharophagus degradans 2-40]
          Length = 133

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 56/116 (48%), Gaps = 13/116 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------HKDLNTLS 284
               +     I +      V VV E  KL G++++ D+ RN            KD  TLS
Sbjct: 16  PTDTVGRLSKIFATLPIHHVLVV-EADKLIGVVSDRDVLRNISPFVNTKAEEAKDTFTLS 74

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +M K P  I  D  +  A +L+ +  +S+L VVD+ ++ IG++ + D++RF
Sbjct: 75  RQAKQIMSKKPVTIRVDRPVREAGKLMLEKKVSLLPVVDENEQLIGVLSWKDVMRF 130



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 48/134 (35%), Gaps = 19/134 (14%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES---RNFS 200
           IT+     V   + I  TLP                 + +   D L   + +    RN S
Sbjct: 12  ITAAPTDTVGRLSKIFATLPIHH--------------VLVVEADKLIGVVSDRDVLRNIS 57

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                         TL   A  +M        V    P+ +A  ++ EK+   + VVDE 
Sbjct: 58  PFVNTKAEEAKDTFTLSRQAKQIMSKKPVTIRV--DRPVREAGKLMLEKKVSLLPVVDEN 115

Query: 261 QKLKGIITEGDIFR 274
           ++L G+++  D+ R
Sbjct: 116 EQLIGVLSWKDVMR 129



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +S++ +M            +    ++     I  ++VV+   K IG+V   D+LR
Sbjct: 1   MSIKKMMTTRLITAAPTDTVGRLSKIFATLPIHHVLVVEAD-KLIGVVSDRDVLR 54


>gi|333027953|ref|ZP_08456017.1| putative transcriptional regulator [Streptomyces sp. Tu6071]
 gi|332747805|gb|EGJ78246.1| putative transcriptional regulator [Streptomyces sp. Tu6071]
          Length = 305

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 49/219 (22%), Positives = 88/219 (40%), Gaps = 14/219 (6%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSL-----------QGELSFQFHCAVEKI 60
           +      ++N   Q A +  I+E+  L+ +   +           + +L           
Sbjct: 90  SAAAREDVRNKDSQWATKGDISEEDSLAQVVDKIIYNESGTLEDTRAQLDLDVLARAVDA 149

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A   R+ I G+G SG +G  L   L   G  +F      A+     ++   D+ I +S 
Sbjct: 150 VAAARRIDIFGLGASGFVGGDLHQKLHRIGHMAFVWTDGHAALTASALLGEGDVAIGISH 209

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +GS+ +    L  A       IA+T+  +S +A  AD+VLT          G   T S I
Sbjct: 210 TGSTVDTLEPLQAAGERGATTIALTNFARSPMAECADLVLTTAVREMPFRSGA--TASRI 267

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
            QLA+ D L + + + ++++E+   +    G +  L   
Sbjct: 268 AQLAVVDCLFVGVAQ-KSYAESTAALARTYGAVRHLRGR 305


>gi|308270292|emb|CBX26904.1| hypothetical protein N47_A09330 [uncultured Desulfobacterium sp.]
          Length = 216

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/134 (21%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +     +                    +     + +AI ++       + VV + + LKG
Sbjct: 1   MSRKNRQSTKKVNDMKIESLMVPDPITITENSSITEAIDLMKVNSIRHLPVVGKNKTLKG 60

Query: 266 IITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            IT   + +   H  +  LS+ D++IK+P  +  D  + VA Q +  H I  + VV    
Sbjct: 61  FITLSVLKQGLVHTMIGDLSLNDLIIKSPITVSPDEDIEVAAQKIYNHKIGGMPVV-KGN 119

Query: 325 KAIGIVHFLDLLRF 338
           K +GI+   D+L  
Sbjct: 120 KLVGIITVTDILGA 133



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 38/68 (55%), Gaps = 1/68 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   K +N + +E +M+ +P  I E++ +T A+ L++ ++I  L VV   +   G +   
Sbjct: 6   RQSTKKVNDMKIESLMVPDPITITENSSITEAIDLMKVNSIRHLPVVGKNKTLKGFITLS 65

Query: 334 DLLRFGII 341
            +L+ G++
Sbjct: 66  -VLKQGLV 72


>gi|196247957|ref|ZP_03146659.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
 gi|196212741|gb|EDY07498.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
          Length = 270

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 54/125 (43%), Gaps = 1/125 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +SL+ + Q   S +    V +I   K +V   G+  S  I           G  +     
Sbjct: 108 ASLKQTEQLLRSKEIIQVVHEIHRSK-KVAFFGVTFSHLIARNAQFKFIRLGKYATAYSN 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            E    +   +T  DL +V+S+SG +  +  ++   ++  IP++AIT   K  +A HA  
Sbjct: 167 HENQISEAESLTPRDLAVVISFSGETRFIVQLVKILKKRGIPIVAITGNEKGYLAQHAKQ 226

Query: 159 VLTLP 163
           ++ + 
Sbjct: 227 IIKVS 231


>gi|52548942|gb|AAU82791.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
           GZfos1C11]
          Length = 134

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+ + + IL  K    +AV     +  G+I+E DI +   KD ++L+ EDVM   
Sbjct: 23  VAHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKFMDKDWDSLTAEDVMSHF 82

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLLRF 338
            + I  +T L  A   +++ NI  L+V+         IGI+   D+LR 
Sbjct: 83  VRAIDPETTLRKAADTMKELNIHRLLVLSLSPAPGVPIGILSASDILRA 131



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 31/58 (53%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +VM +    +  DT +   +++L + +IS + V     +A+G++  +D+++F
Sbjct: 8   KEKKVREVMTRGVITVAHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKF 65


>gi|15899907|ref|NP_344512.1| hypothetical protein SSO3205 [Sulfolobus solfataricus P2]
 gi|284175182|ref|ZP_06389151.1| hypothetical protein Ssol98_11120 [Sulfolobus solfataricus 98/2]
 gi|13816643|gb|AAK43302.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601584|gb|ACX91187.1| CBS domain containing membrane protein [Sulfolobus solfataricus
           98/2]
          Length = 277

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 51/118 (43%), Gaps = 2/118 (1%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  + +   +   V        AI I+  + FG + VVD   K  GI+TE +    
Sbjct: 70  HISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVTEREFL-L 128

Query: 276 FHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +KDL+    V+  M    + I ++  L  A++L+ +     L V+DD  K +GIV  
Sbjct: 129 LYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTV 186



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 47/118 (39%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              + P++     L  A   ++E   G + V +E  K++G++T  D+             
Sbjct: 7   MIKNPPILSKEDRLGSAFKKINEGGIGRIIVANE--KIEGLLTTRDLLSTVESYCKDSCS 64

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 ++T  + D M  NP  +   +    A+ ++   N   L VVD   K +GIV 
Sbjct: 65  QGDLYHISTTPIIDYMTPNPVTVYNTSDEFTAINIMVTRNFGSLPVVDINDKPVGIVT 122



 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
               +  +     L  A+ ++  + F  + V+D+  K+ GI+T  +  +   K ++ L  
Sbjct: 143 MSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNAIKQLAKAVDKLDP 202

Query: 285 -------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  V+DVM+ N   I E   +  A   +    I  L++++      GI+   DLL
Sbjct: 203 DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLL 261



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 21/41 (51%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             +  A   +  KR G + ++++   ++GIITE D+    H
Sbjct: 225 ASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIALH 265



 Score = 36.0 bits (82), Expect = 9.0,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +E +MIKNP ++ ++  L  A + + +  I  ++V ++  K  G++   DLL
Sbjct: 3   IETLMIKNPPILSKEDRLGSAFKKINEGGIGRIIVANE--KIEGLLTTRDLL 52


>gi|15893966|ref|NP_347315.1| CBS domain-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023555|gb|AAK78655.1|AE007583_2 CBS domains [Clostridium acetobutylicum ATCC 824]
 gi|325508093|gb|ADZ19729.1| CBS domain protein [Clostridium acetobutylicum EA 2018]
          Length = 142

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V     +  A  ++ +   G + V +   K+ G++T+ DI  R   +  D ++ +V  +M
Sbjct: 14  VSGEENIKRAAELMRDHDIGAIPVCNSD-KVIGVVTDRDIVLRTVAEGSDASSENVRSIM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              P V   D     A +++ +  +  L V     K +G+V   D
Sbjct: 73  TSTPVVASPDMDAREATKIMSEKQVRRLPVA-RDGKLVGMVSLGD 116



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + +VM KN   +  +  +  A +L+R H+I  + V +   K IG+V   D++
Sbjct: 1   MKISEVMTKNVVSVSGEENIKRAAELMRDHDIGAIPVCNSD-KVIGVVTDRDIV 53


>gi|315426926|dbj|BAJ48545.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315426989|dbj|BAJ48607.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
 gi|315428075|dbj|BAJ49662.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 132

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 47/118 (39%), Gaps = 2/118 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +   K    L D    + + +     VV    K+ GI+TE D  + F   
Sbjct: 9   VKVSEIMSRRVVTAKGDEKLSDIAEKMIQSKV-SSVVVVSDGKVAGIVTEKDFVKFFALR 67

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++    + D M +   V+ ED  L  A  ++  +NI  L VVD     +G++   D++
Sbjct: 68  VDYDSKISDYMTREVIVVREDASLNEAKNIMVSNNIRHLPVVDRNNNLVGMITVRDIV 125



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF           +   +    +    + +V+    L +A  I+       + VVD 
Sbjct: 56  TEKDFVKF----FALRVDYDSKISDYMTREVIVVREDASLNEAKNIMVSNNIRHLPVVDR 111

Query: 260 GQKLKGIITEGDIFRNFH 277
              L G+IT  DI  +  
Sbjct: 112 NNNLVGMITVRDIVESVE 129


>gi|254525345|ref|ZP_05137400.1| inosine-5'-monophosphate dehydrogenase [Stenotrophomonas sp. SKA14]
 gi|219722936|gb|EED41461.1| inosine-5'-monophosphate dehydrogenase [Stenotrophomonas sp. SKA14]
          Length = 487

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 13/202 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
           A+T ++ S+V  H+ I+   + L            P  SA M       LAIA+ +    
Sbjct: 10  ALTYDDVSLVPAHSTILPKDVNLETRLTRDLKLKLPILSAAMDTVTEARLAIAMAQLGGM 69

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +  +     ++  +    + V+        V     + D + +        V VV
Sbjct: 70  GIIHKNLSLEQQAAEVAKVKKFEAGVIR---DPITVGPETTIRDVLALTQAHNISGVPVV 126

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
                L GI+T  D+   F  +L+   V  +M K      + E       +QLL ++ I 
Sbjct: 127 GSDGLLAGIVTHRDMR--FETELDD-PVRHIMTKKDRLITVKEGAASDEVLQLLHRNRIE 183

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            ++VV+D  +  G++   D+ +
Sbjct: 184 KVLVVNDSFELRGLITVKDIQK 205



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +M   D +  VK G    + + +L   R   V VV++  +L+G+IT  DI +N
Sbjct: 151 VRHIMTKKDRLITVKEGAASDEVLQLLHRNRIEKVLVVNDSFELRGLITVKDIQKN 206


>gi|190574032|ref|YP_001971877.1| inosine 5'-monophosphate dehydrogenase [Stenotrophomonas
           maltophilia K279a]
 gi|190011954|emb|CAQ45576.1| putative inosine-5'-monophosphate dehydrogenase [Stenotrophomonas
           maltophilia K279a]
          Length = 485

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 41/202 (20%), Positives = 77/202 (38%), Gaps = 13/202 (6%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--R 197
           A+T ++ S+V  H+ I+   + L            P  SA M       LAIA+ +    
Sbjct: 8   ALTYDDVSLVPAHSTILPKDVNLETRLTRDLKLKLPILSAAMDTVTEARLAIAMAQLGGM 67

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
                +  +     ++  +    + V+        V     + D + +        V VV
Sbjct: 68  GIIHKNLSLEQQAAEVAKVKKFEAGVIR---DPITVGPETTIRDVLALTQAHNISGVPVV 124

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNIS 315
                L GI+T  D+   F  +L+   V  +M K      + E       +QLL ++ I 
Sbjct: 125 GSDGLLAGIVTHRDMR--FETELDD-PVRHIMTKKDRLITVKEGAASDEVLQLLHRNRIE 181

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            ++VV+D  +  G++   D+ +
Sbjct: 182 KVLVVNDSFELRGLITVKDIQK 203



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +M   D +  VK G    + + +L   R   V VV++  +L+G+IT  DI +N
Sbjct: 149 VRHIMTKKDRLITVKEGAASDEVLQLLHRNRIEKVLVVNDSFELRGLITVKDIQKN 204


>gi|13541628|ref|NP_111316.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
          Length = 361

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 5/129 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 S + +   + P +     +++A+ ++ +     + V D+  KL GII+  DI +
Sbjct: 56  RSIQVKSKISNYAINTPTLSADDDVLEAVRLIKDTGLSALPVFDK-GKLVGIISRTDIIK 114

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              K  D++ L    +M  +P  + ED  +  A   LRQ N   + VVD+ ++ +GIV  
Sbjct: 115 RIDKISDISNLRAFQIMSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKL 174

Query: 333 LDLLRFGII 341
            D+L  GI+
Sbjct: 175 NDIL--GIM 181



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V +       ++ ++E     + V+D G +  G+IT  D+ +     + +  +
Sbjct: 7   MTPDPVTVGVDDTFSKVMSKMNETGIHQLPVMD-GNRYAGMITYSDLLKKRSIQVKS-KI 64

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  I  P  +  D  +  A++L++   +S L V D   K +GI+   D+++
Sbjct: 65  SNYAINTP-TLSADDDVLEAVRLIKDTGLSALPVFDK-GKLVGIISRTDIIK 114



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M  +P  +  D   +  M  + +  I  L V+D   +  G++ + DLL+ 
Sbjct: 1   MKVRELMTPDPVTVGVDDTFSKVMSKMNETGIHQLPVMD-GNRYAGMITYSDLLKK 55



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 46/129 (35%), Gaps = 15/129 (11%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---- 276
                       V     + +A   L +     + VVD  ++L GI+   DI        
Sbjct: 126 RAFQIMSPDPVAVSEDDSIEEAFDSLRQLNEVEIPVVDNEERLVGIVKLNDILGIMFREK 185

Query: 277 ---------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                     K+   ++   VM   P  +     +   +  + ++ + ++ +VD   K +
Sbjct: 186 EKIKYGGYGEKERVQIACGSVMDP-PISVDRYADVKTVVDEMMKNELHIMPIVD-SGKLV 243

Query: 328 GIVHFLDLL 336
           GI+ F DL+
Sbjct: 244 GIIDFSDLI 252


>gi|150016792|ref|YP_001309046.1| RpiR family transcriptional regulator [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903257|gb|ABR34090.1| transcriptional regulator, RpiR family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 281

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 38/156 (24%), Positives = 69/156 (44%), Gaps = 4/156 (2%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +E ++          A+E + + K  + I  +G SG +G      L+             
Sbjct: 109 MEQTVSLLDEECLDKAIELLISAKN-IYIFSVGVSGLVGQDFYYKLSRMNKRCICNTDTH 167

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT-SENKSVVACHADIV 159
                  ++   D+ + +S+SG + E+   +  AR   +P+IAIT +   + +A  +DIV
Sbjct: 168 LQITSSVLLEEGDVALAISYSGETKEVIKCVKNARNRKVPVIAITKASVNNTIADISDIV 227

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           + +P   +S   G    +S I QLAI D L I ++ 
Sbjct: 228 IRIPAVEKSIREGAI--SSRISQLAIIDMLYIGMIR 261


>gi|218779499|ref|YP_002430817.1| hypothetical protein Dalk_1651 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760883|gb|ACL03349.1| CBS domain containing membrane protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 149

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 50/131 (38%), Gaps = 28/131 (21%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------------- 273
           K    + +A   L E R     VVDE  K+ GI+ + D+                     
Sbjct: 16  KPDTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLIVQQKRFPVPSFFTLLDSVIP 75

Query: 274 ----RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
               ++F K++       V   M + P V+  DT L     L+    +  L VVD   K 
Sbjct: 76  LVSQKHFEKEMEKMAAFKVSQAMTEKPVVVSPDTPLEDVAALMVDKKLHTLPVVD-SGKL 134

Query: 327 IGIVHFLDLLR 337
           +G+V   D+LR
Sbjct: 135 VGVVGKEDILR 145



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V D+M      +  DT ++ A + L ++ I+   VVD+  K +GI+   DL+
Sbjct: 2   QKVSDIMTTEVISLKPDTDISEAAKQLLENRINGAPVVDEDGKVVGILCQSDLI 55



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             +   +V    PL D   ++ +K+   + VVD   KL G++ + DI R   
Sbjct: 98  MTEKPVVVSPDTPLEDVAALMVDKKLHTLPVVD-SGKLVGVVGKEDILRTLM 148


>gi|116492804|ref|YP_804539.1| transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
 gi|116102954|gb|ABJ68097.1| transcriptional regulator, RpiR family [Pediococcus pentosaceus
           ATCC 25745]
          Length = 280

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 2/127 (1%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G+G S  +           G               +G+   + ++IV+S SG + E
Sbjct: 131 IYVFGMGASNLVAEDFQQKFIRIGKSVIQTLDTHLMA--VGLAKPNSVLIVVSDSGETKE 188

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
              I   A   +IP+IAIT E  S +A ++ + LT     ES     A TTS + QL + 
Sbjct: 189 SCHITRVASSLNIPIIAITHERNSTIAKNSTVTLTHDDGGESGVLRTAATTSLLAQLYVV 248

Query: 187 DALAIAL 193
           D L  A 
Sbjct: 249 DLLYYAY 255


>gi|327439202|dbj|BAK15567.1| FOG: CBS domain [Solibacillus silvestris StLB046]
          Length = 215

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-- 276
              + +   +   L+     + DA+ ++ E+    V +V++   + GIIT+ D+      
Sbjct: 1   MIVEEIMQREIHTLLPENT-VRDAVRLMREENIRHVPIVNKENVVVGIITDHDLKNALPS 59

Query: 277 ------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                    +    +E +M+KNP V      +           IS L +V    K +GIV
Sbjct: 60  RLREEPDSTIYDAPIEKIMVKNPIVGHPLDFVEEVAMTFYDAKISCLPIVT-AGKLVGIV 118

Query: 331 HFLDLL 336
              DLL
Sbjct: 119 TTTDLL 124


>gi|319939590|ref|ZP_08013949.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
 gi|319811179|gb|EFW07485.1| AcuB family protein [Streptococcus anginosus 1_2_62CV]
          Length = 218

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   ++DVMI++   + +   L  A  L+ ++ I +L VVD+ Q   G++   D+ R 
Sbjct: 73  NKTKIKDVMIRDVVTVSQFASLEDATYLMLKNKIGILPVVDNQQ-VYGVITDRDVFRA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADIMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD  Q++ G+IT+ D+FR F
Sbjct: 81  MIRDVVTVSQFASLEDATYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAF 130


>gi|188585185|ref|YP_001916730.1| putative signal-transduction protein with CBS and DRTGG domains
           [Natranaerobius thermophilus JW/NM-WN-LF]
 gi|179349872|gb|ACB84142.1| putative signal-transduction protein with CBS and DRTGG domains
           [Natranaerobius thermophilus JW/NM-WN-LF]
          Length = 434

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 6/129 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              + +  +   D++   +    +       D   +L +       V ++  K+ G++T 
Sbjct: 180 NKMVESEILHVKDII--NNHPHYLNEKDTYQDWEQLLDKTEHSRFPVTNDENKVVGVVTS 237

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+     +D N  S+  +M  NP  +  +TL+     ++    I ++ VVD+  K IGI
Sbjct: 238 KDVT---GRDYN-ASIAKLMTSNPITVSPETLVASVAYVMVWQGIEMIPVVDEQDKLIGI 293

Query: 330 VHFLDLLRF 338
           V   D++  
Sbjct: 294 VSRHDVMEA 302



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLN 281
              +   V     +     ++  +    + VVDE  KL GI++  D+          D N
Sbjct: 253 MTSNPITVSPETLVASVAYVMVWQGIEMIPVVDEQDKLIGIVSRHDVMEAMQFGKGHDKN 312

Query: 282 TLSVEDVMIKNPKV 295
           T +    MI+N   
Sbjct: 313 TATAARKMIQNNFT 326


>gi|303241694|ref|ZP_07328192.1| putative signal transduction protein with CBS domains [Acetivibrio
           cellulolyticus CD2]
 gi|302590809|gb|EFL60559.1| putative signal transduction protein with CBS domains [Acetivibrio
           cellulolyticus CD2]
          Length = 139

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           V     +++A  ++ +   G V V D   K+ G++T+ DI  RN           V+DVM
Sbjct: 14  VNPSNTVVEAAQLMQKLNVGSVPVFD-QNKVVGVVTDRDIVVRNVAHGKIPQDTKVQDVM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 +  D  +    +++ Q  I  + V+ +  + +GI+   D+
Sbjct: 73  TSQVTTVTPDMDVDEVSRIMAQQQIRRVPVI-ENNQLVGILALGDM 117



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V + M KN   +     +  A QL+++ N+  + V D   K +G+V   D++
Sbjct: 1   MKVREKMTKNVGYVNPSNTVVEAAQLMQKLNVGSVPVFD-QNKVVGVVTDRDIV 53


>gi|296160927|ref|ZP_06843739.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
 gi|295888816|gb|EFG68622.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. Ch1-1]
          Length = 229

 Score = 78.4 bits (192), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   I  +       V+D    L G+I+EGD+ R      +           
Sbjct: 14  VTPDMTVREVARIFVDNGISGAPVLDPQGHLAGMISEGDLLRRTEIGTDERKPSSWLDVW 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                         + V DVM  +   +  DT L     +L    I  + V     + +G
Sbjct: 74  SASHEARDYIKTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVT-QAGRVVG 132

Query: 329 IVHFLDLLRF 338
           IV   +L++ 
Sbjct: 133 IVSRANLVQA 142



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVMI N   +  D  +    ++   + IS   V+D      G++   DLLR
Sbjct: 1   MRASDVMITNVISVTPDMTVREVARIFVDNGISGAPVLDPQGHLAGMISEGDLLR 55


>gi|315221921|ref|ZP_07863832.1| CBS domain pair protein [Streptococcus anginosus F0211]
 gi|315188887|gb|EFU22591.1| CBS domain pair protein [Streptococcus anginosus F0211]
          Length = 218

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   ++DVMI++   + +   L  A  L+ ++ I +L VVD+ Q   G++   D+ R 
Sbjct: 73  NKTKIKDVMIRDVVTVSQFASLEDATYLMLKNKIGILPVVDNQQ-VYGVITDRDVFRA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADIMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD  Q++ G+IT+ D+FR F
Sbjct: 81  MIRDVVTVSQFASLEDATYLMLKNKIGILPVVD-NQQVYGVITDRDVFRAF 130


>gi|297564600|ref|YP_003683572.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
 gi|296849049|gb|ADH62064.1| CBS domain containing protein [Meiothermus silvanus DSM 9946]
          Length = 181

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 60/162 (37%), Gaps = 27/162 (16%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            +P   L                   V++   L+ A   + E R G + VV+E  KL G+
Sbjct: 6   FNPRYFLRDRLRLVRVKELMKTRPYSVRLDETLLVAAQRMLEHRLGGLPVVNEAGKLVGL 65

Query: 267 ITEGDI--------------FRNFHKDLNTLSVEDV------------MIKNPKVILEDT 300
           I   D+               R F + ++  SVE V            M     V+  + 
Sbjct: 66  IEVDDLLPRPENVPFSEVEALRLFDEWVDPGSVESVYRQYQSKPVAAAMRTELAVVSPED 125

Query: 301 LLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            L  A+ ++++      ++VVD+  + +G +   D LR  ++
Sbjct: 126 PLETALVRMMQDRQYRRVLVVDEQGQLVGTLTRSDFLRLFVM 167


>gi|260768305|ref|ZP_05877239.1| Signal transduction protein [Vibrio furnissii CIP 102972]
 gi|260616335|gb|EEX41520.1| Signal transduction protein [Vibrio furnissii CIP 102972]
          Length = 629

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 28/183 (15%)

Query: 183 LAIGDALAIALLESRNFS----ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL------ 232
            AI D L   + E+   S     + F           L    S+     D   +      
Sbjct: 97  TAIEDTLVYCIPEAMFQSLYEEHDAFADYVEVQDNARLRQTVSNTAEQNDLTTVKVKRLI 156

Query: 233 ------VKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
                 V     + +    ++E+    V V+D         + + L GI+T+ D+  R  
Sbjct: 157 TGDAPYVHNTATIQEVAVKMAEENVSSVLVIDPEILQDEEDDSRPLMGILTDRDLCRRVI 216

Query: 277 HKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +   V  VM      +  +  +  AM  + ++N+  L V+   Q  IGI+   D+
Sbjct: 217 ATGIDHNEPVTTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KEQTPIGIIDLTDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278


>gi|258511574|ref|YP_003185008.1| putative signal transduction protein with CBS domains
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257478300|gb|ACV58619.1| putative signal transduction protein with CBS domains
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 238

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 58/145 (40%), Gaps = 10/145 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +++  P      +      V        +V+    + DA+  +  +  G + V DE  +L
Sbjct: 85  YFLADPAEPATPVPWRDLRVGEVQSLPVIVRETTTVHDAVITMFLEDVGGLIVADEEGRL 144

Query: 264 KGIITEGDIFRNFHKDLN--TLSVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMV 319
           +G+++  D  +    + +  +L V  +M + P    +  + L+  A + + ++ +  L V
Sbjct: 145 QGVVSRKDFLKFTLGNASATSLPVGMIMTRYPHIETVTPNDLVVDAAKRMIEYKVDSLPV 204

Query: 320 V---DDCQKA---IGIVHFLDLLRF 338
           V    +  K    +G +    L R 
Sbjct: 205 VQPSSEDGKPPIVVGRITKTTLARL 229


>gi|239981391|ref|ZP_04703915.1| transcriptional regulator [Streptomyces albus J1074]
          Length = 273

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 5/188 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S        + +S      +    E++ L+   + L      Q    V+ +   + R+ 
Sbjct: 64  QSPAVTADIAVDDSLADVVAKLAYDEQQTLADTAAGLDT---AQLAACVDALAGAR-RID 119

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I GIG SG +   LA  L   G  +        +  +   +   D+ I ++ SG++ ++ 
Sbjct: 120 IYGIGASGLVAQDLAQKLLRIGLIAHAHADPHLAVTNAVQLRPRDVAIAITHSGTTGDVI 179

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A       IA+T      V+ +AD  L             A  +S   QL + D 
Sbjct: 180 EPLRTAFERGATTIAVTGRPDGAVSQYAD-HLLTTSTARESELRPAAMSSRTSQLLVVDC 238

Query: 189 LAIALLES 196
           L + + + 
Sbjct: 239 LFVGVAQR 246


>gi|197123767|ref|YP_002135718.1| signal-transduction protein with CBS domains [Anaeromyxobacter sp.
           K]
 gi|220918531|ref|YP_002493835.1| signal transduction protein with CBS domains [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|196173616|gb|ACG74589.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. K]
 gi|219956385|gb|ACL66769.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 141

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
            +    + D   ++ ++  G V V ++  +  G IT+ D+  R   +       V   M 
Sbjct: 13  CRENDSVRDCAELMRDEEIGFVPVCNDAGEPVGAITDRDLAIRVLAEGRTADEQVSSCMT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +          L  A QL+RQ  +S +MV DD  +  G++   D+
Sbjct: 73  REVVACRLGDDLRDAEQLMRQRQLSRVMVCDDDGRLRGVISLADI 117


>gi|254240247|ref|ZP_04933569.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|126193625|gb|EAZ57688.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 385

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L + R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQDHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/79 (24%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 267 ITEGDIFR--------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           IT  D+ R           + +  L+   +M ++ +    +T +  A + L+ H +  L 
Sbjct: 218 ITRDDLERLIHHTERYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQDHRLKALP 277

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+D+ ++  GIV   DLL+
Sbjct: 278 VLDEHRRLAGIVTQSDLLK 296



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|327310289|ref|YP_004337186.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326946768|gb|AEA11874.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 140

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 4/114 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFH-KDLNTL 283
                 + +   +  A   ++    G + +VD  E +K  G+I+E DI R    K   T+
Sbjct: 8   RRPPVTIPVTATVEQAAEAMANNNVGLLVIVDPKEPKKPIGVISERDIIRTIAGKAPLTV 67

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V+      N   I ED  +  A  L+R+H+I  L+V+DD  + +G++   DL+
Sbjct: 68  TVDKAGTMGNFIWIREDETIYRAAYLMRKHHIRHLVVLDDKGELVGVLSIRDLI 121



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 2/57 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLR 337
           + V++++ + P  I     +  A + +  +N+ +L++VD  + +K IG++   D++R
Sbjct: 1   MKVKEILRRPPVTIPVTATVEQAAEAMANNNVGLLVIVDPKEPKKPIGVISERDIIR 57


>gi|295399549|ref|ZP_06809531.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312109896|ref|YP_003988212.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294979015|gb|EFG54611.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311214997|gb|ADP73601.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 214

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SV 285
           +    + +AI ++ ++R   + +VD    + GI+T+ DI         FH+ L  L   +
Sbjct: 15  QPTNTIAEAIQLVRQRRIRHIPIVDGDDHVVGIVTDRDIRDASPSIFHFHEHLEDLQKPI 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M  +  V      +     L  +H IS L +V   +K +GIV   DLL
Sbjct: 75  STIMKTDVIVGHPLDFVEEVAALFYEHKISCLPIV-KDRKLVGIVTETDLL 124



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE +M      +     +  A+QL+RQ  I  + +VD     +GIV   D+
Sbjct: 3   VEQIMKTPVITLQPTNTIAEAIQLVRQRRIRHIPIVDGDDHVVGIVTDRDI 53


>gi|229493455|ref|ZP_04387240.1| cyclic nucleotide-binding protein [Rhodococcus erythropolis SK121]
 gi|229319416|gb|EEN85252.1| cyclic nucleotide-binding protein [Rhodococcus erythropolis SK121]
          Length = 477

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 48/131 (36%), Gaps = 3/131 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H  G+                   +      + +A  ++++     V +        GI 
Sbjct: 4   HSAGQGMQSPAMRRVRDLLRGPAIVCSEQATIREAAKLMTDAGRRAVVIPTATTGF-GIF 62

Query: 268 TEGDIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           TEGD+  R     +++   V  VM  +   +  D L   A+  + ++ +  L VV +   
Sbjct: 63  TEGDLRARVVVGGIDSSQPVSTVMTPSAVTVDPDRLGADAVTDMLEYGLRHLPVVTEAGA 122

Query: 326 AIGIVHFLDLL 336
            +G++   DLL
Sbjct: 123 LMGVLELSDLL 133


>gi|170740037|ref|YP_001768692.1| signal-transduction protein [Methylobacterium sp. 4-46]
 gi|168194311|gb|ACA16258.1| putative signal-transduction protein with CBS domains
           [Methylobacterium sp. 4-46]
          Length = 131

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 5/123 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           + V     + +G  +  V     +      +     G +AV+DE  +L GII+E DI R 
Sbjct: 1   MTVPTVGDVIAGHPLHAVTGSFTIASVCHRMRALNVGALAVLDE-GRLIGIISERDIARR 59

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               H+D     V +VM + P  I     L  A +L+ +  I  L V+ D    +G++  
Sbjct: 60  VIAGHRDPMLTLVREVMTREPLTIAAQAPLAEAHRLMAERGIRHLPVMRDE-AVVGMISL 118

Query: 333 LDL 335
            D+
Sbjct: 119 RDI 121


>gi|297853268|ref|XP_002894515.1| CLC-F [Arabidopsis lyrata subsp. lyrata]
 gi|297340357|gb|EFH70774.1| CLC-F [Arabidopsis lyrata subsp. lyrata]
          Length = 781

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 54/142 (38%), Gaps = 23/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL++    C+ VVD+ + L GI+T GDI 
Sbjct: 609 ETILEDLKVMRVMSKNYVKVSSGTTLREARNILNDSHQNCLMVVDDDEFLAGILTHGDIR 668

Query: 274 RNFHK------DLNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLM 318
           R          D NT  V  V  K                D  + VA +L+    +  L 
Sbjct: 669 RYLSNNVSTIFDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLP 728

Query: 319 VVD--------DCQKAIGIVHF 332
           VV           +K +G++H+
Sbjct: 729 VVKRGEVIHKGKRRKLLGLLHY 750



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +   T L  A  +L   + + LMVVDD +   GI+   D+ R+
Sbjct: 612 LEDLKVMRVMSKNYVKVSSGTTLREARNILNDSHQNCLMVVDDDEFLAGILTHGDIRRY 670


>gi|298290161|ref|YP_003692100.1| signal transduction protein with CBS domains [Starkeya novella DSM
           506]
 gi|296926672|gb|ADH87481.1| putative signal transduction protein with CBS domains [Starkeya
           novella DSM 506]
          Length = 228

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 25/129 (19%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------- 279
           K    ++     L E+R   + +VD+  K+ GII+EGD+ R                   
Sbjct: 15  KATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIRRAEAGTERRRSWWLQAFVD 74

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                      +  +  DVM ++P     DT L     L+  H +  + +V+     +GI
Sbjct: 75  DGTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVEK-GHLVGI 133

Query: 330 VHFLDLLRF 338
           V   +L++ 
Sbjct: 134 VSRSNLIQA 142



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 25/55 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM           L+    + L +  IS + +VDD  K +GI+   DL+R
Sbjct: 1   MKARDVMTSPVITAKATDLVVQIAKTLLERRISGMPIVDDKGKMVGIISEGDLIR 55


>gi|284052989|ref|ZP_06383199.1| chloride channel protein [Arthrospira platensis str. Paraca]
          Length = 629

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVI 296
            L    +  S+       VV+   KL GII++ D+ R   +D++    +  +M   P  I
Sbjct: 474 SLEQVRSAFSQSHHRGFPVVN-QGKLVGIISQTDMARINQQDISEQTPLHKLMTPQPVTI 532

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D  L+  + LL +  +S L VV + +  +GI+   D++R
Sbjct: 533 YPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +    PL + + +L  ++   + VV EG+ L GIIT  DI R
Sbjct: 525 MTPQPVTIYPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572


>gi|261251372|ref|ZP_05943946.1| Signal transduction protein [Vibrio orientalis CIP 102891]
 gi|260938245|gb|EEX94233.1| Signal transduction protein [Vibrio orientalis CIP 102891]
          Length = 629

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 12/117 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDLN- 281
           +     + +A   ++E+    + V+D         +   L GIIT+ D+  R   + L+ 
Sbjct: 163 IPKTESIQNAAIKMAEENVSSLLVIDPEVADDDEDDNNPLVGIITDRDLCTRVLAQGLDP 222

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V  VM      +  +  +  AM  + ++N+  L V+   ++ IGI+   D++R+
Sbjct: 223 NDEVSSVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KDKQPIGIIEATDIVRY 278



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---------DDCQKAI 327
             DL T  V  ++      I +   +  A   + + N+S L+V+         DD    +
Sbjct: 144 QNDLTTSKVRTLLTTEAPSIPKTESIQNAAIKMAEENVSSLLVIDPEVADDDEDDNNPLV 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|152987254|ref|YP_001348798.1| hypothetical protein PSPA7_3439 [Pseudomonas aeruginosa PA7]
 gi|150962412|gb|ABR84437.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 385

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/136 (21%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L E R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 33/65 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + +  L+   +M ++ +    +T +  A + L++H +  L V+D+ ++  GIV  
Sbjct: 232 RYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQEHRLKALPVLDEHRRLAGIVTQ 291

Query: 333 LDLLR 337
            DLL+
Sbjct: 292 SDLLK 296



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|255744573|ref|ZP_05418524.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholera CIRS 101]
 gi|262161292|ref|ZP_06030403.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae INDRE 91/1]
 gi|262168785|ref|ZP_06036480.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae RC27]
 gi|255737604|gb|EET92998.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholera CIRS 101]
 gi|262022903|gb|EEY41609.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae RC27]
 gi|262029042|gb|EEY47695.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae INDRE 91/1]
          Length = 487

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|83718847|ref|YP_442580.1| inosine 5'-monophosphate dehydrogenase [Burkholderia thailandensis
           E264]
 gi|167581509|ref|ZP_02374383.1| inositol-5-monophosphate dehydrogenase [Burkholderia thailandensis
           TXDOH]
 gi|167619621|ref|ZP_02388252.1| inositol-5-monophosphate dehydrogenase [Burkholderia thailandensis
           Bt4]
 gi|257138788|ref|ZP_05587050.1| inosine 5'-monophosphate dehydrogenase [Burkholderia thailandensis
           E264]
 gi|83652672|gb|ABC36735.1| inosine-5'-monophosphate dehydrogenase [Burkholderia thailandensis
           E264]
          Length = 486

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPVEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       V+ EG KL GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPSMKVRDVIALSRQHGISGFPVL-EGPKLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E T L  A  L+  H +  ++VV+D  +  G++   D+ +
Sbjct: 155 ERLVTVAEGTPLAEAKALMHSHRLERVLVVNDAFELRGLMTVKDITK 201


>gi|73669581|ref|YP_305596.1| hypothetical protein Mbar_A2085 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396743|gb|AAZ71016.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 500

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 1/106 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +K    + DA   +    F  + V+ +  +L GI+T  DI +   ++    SV
Sbjct: 384 MSSFVVTIKRDQTVQDAAKKIWANSFNHLTVISDSGELVGILTAWDISKAVAENCFD-SV 442

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E VM K       +  + +A + L ++ +S + V+D  ++ +GI+ 
Sbjct: 443 ESVMTKKVLTCAPNEPVDLAARRLDRYGVSAMPVIDAQRQVLGIIT 488



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM      I  D  +  A + +  ++ + L V+ D  + +GI+   D+ + 
Sbjct: 380 VKDVMSSFVVTIKRDQTVQDAAKKIWANSFNHLTVISDSGELVGILTAWDISKA 433


>gi|315180013|gb|ADT86927.1| cyclic nucleotide-binding protein [Vibrio furnissii NCTC 11218]
          Length = 629

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 65/183 (35%), Gaps = 28/183 (15%)

Query: 183 LAIGDALAIALLESRNFS----ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL------ 232
            AI D L   + E+   S     + F           L    S+     D   +      
Sbjct: 97  TAIEDTLVYCIPEAMFQSLYEEHDAFADYVEVQDNARLRQTVSNTAEQNDLTTVKVKRLI 156

Query: 233 ------VKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
                 V     + +    ++E+    V V+D         + + L GI+T+ D+  R  
Sbjct: 157 TGDAPYVHNTATIQEVAVKMAEENVSSVLVIDPEILQDEEDDSRPLMGILTDRDLCRRVI 216

Query: 277 HKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +   V  VM      +  +  +  AM  + ++N+  L V+   Q  IGI+   D+
Sbjct: 217 ATGIDHNEPVTTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KEQTPIGIIDLTDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278


>gi|254431490|ref|ZP_05045193.1| CBS [Cyanobium sp. PCC 7001]
 gi|197625943|gb|EDY38502.1| CBS [Cyanobium sp. PCC 7001]
          Length = 145

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 29/134 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V +  PL +A+ ++SE   G + V+D+   L G +TE D+                    
Sbjct: 8   VGVDTPLQEAVKLMSEHHIGGMPVLDQAGSLVGELTEQDLMVRESGFDAGPYVMLLDAVI 67

Query: 274 ---------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                    R  H+ L + +V +VM K       D  L  A + L +     L VVD   
Sbjct: 68  YLRNPLQWDRQVHQVLGS-TVGEVMRKGSHTCSADLPLPAAARQLHESATQRLFVVDGDG 126

Query: 325 KAIGIVHFLDLLRF 338
           + +G++   D++R 
Sbjct: 127 RPVGVLTRGDVVRA 140



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M      +  DT L  A++L+ +H+I  + V+D     +G +   DL+
Sbjct: 1   MTSPVLSVGVDTPLQEAVKLMSEHHIGGMPVLDQAGSLVGELTEQDLM 48



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 18/52 (34%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       PL  A   L E     + VVD   +  G++T GD+ R   
Sbjct: 91  MRKGSHTCSADLPLPAAARQLHESATQRLFVVDGDGRPVGVLTRGDVVRALA 142


>gi|83815901|ref|YP_444692.1| CBS-domain-containing protein [Salinibacter ruber DSM 13855]
 gi|83757295|gb|ABC45408.1| CBS-domain-containing protein [Salinibacter ruber DSM 13855]
          Length = 207

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------ 276
                  +  V     LID    L E  F  + VV E   L G+I++ D+ +        
Sbjct: 76  DRIMSRDVVTVAPDAALIDIRKRLQEGGFNHMLVV-EDGALCGVISDRDVLKAISPFLDT 134

Query: 277 ----HKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               H+D+ TL     ++M  +P  +   T +  A Q L  + +S L VV +    IGIV
Sbjct: 135 YSEKHRDVKTLSRPASEIMQGDPITVAPGTPVEEASQTLLDNRVSSLPVV-EGGDLIGIV 193

Query: 331 HFLDLLRF 338
              D+L +
Sbjct: 194 TGKDMLEY 201



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            T++++ +M ++   +  D  L    + L++   + ++VV +     G++   D+L+ 
Sbjct: 71  FTMTIDRIMSRDVVTVAPDAALIDIRKRLQEGGFNHMLVV-EDGALCGVISDRDVLKA 127


>gi|56421343|ref|YP_148661.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
 gi|56381185|dbj|BAD77093.1| acetoin utilization protein [Geobacillus kaustophilus HTA426]
          Length = 214

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SVEDVM 289
            + +A+ +L   R   + VVDE  +L G++T  D+          H+ L  L   V  +M
Sbjct: 19  TIAEALQLLRHHRIRHLPVVDEEGRLLGLVTSQDLRDASPSIFHLHEHLEDLQKPVSTIM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  V      +     L  +H I  L +V +  K +GI+   DLLR
Sbjct: 79  KTDLIVGHPLDFVEEVAALFYEHRIGCLPIV-NHGKLVGIITQTDLLR 125



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE VM      +     +  A+QLLR H I  L VVD+  + +G+V   DL
Sbjct: 3   VEQVMKAPVITLRATNTIAEALQLLRHHRIRHLPVVDEEGRLLGLVTSQDL 53



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           + +   +  E R GC+ +V+   KL GIIT+ D+ R F +          + IK P    
Sbjct: 91  VEEVAALFYEHRIGCLPIVN-HGKLVGIITQTDLLRTFIELTGVHQPGSQIEIKVP---N 146

Query: 298 EDTLLTVAMQLLRQHNISVLMV 319
           E  +L+ A  ++ + ++++  V
Sbjct: 147 ETGMLSKAAAIISERHVNIASV 168


>gi|305666542|ref|YP_003862829.1| cyclic nucleotide-binding domain-containing protein [Maribacter sp.
           HTCC2170]
 gi|88708809|gb|EAR01044.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Maribacter sp.
           HTCC2170]
          Length = 636

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 54/139 (38%), Gaps = 8/139 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQK 262
            +    G+        S V +       V       +  + + ++E R G + ++ E  K
Sbjct: 147 RLYSQDGEFKQNVESISHVQNVQFKRAPVSCIENTTIEMSASTMTENRVGSIVIIRE-GK 205

Query: 263 LKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             GIIT+ D+           + SV  +M      I E+T +  A   + ++ I+ L + 
Sbjct: 206 PLGIITDKDLRTKIATGRFGISESVVTIMSSPVITIPENTSIAEAQITMLKNKITHLCIT 265

Query: 321 DD---CQKAIGIVHFLDLL 336
            D     + +G++   D++
Sbjct: 266 KDGTMNSELVGVLSEHDIV 284


>gi|198283570|ref|YP_002219891.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218665500|ref|YP_002426195.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 23270]
 gi|198248091|gb|ACH83684.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 53993]
 gi|218517713|gb|ACK78299.1| inosine-5'-monophosphate dehydrogenase [Acidithiobacillus
           ferrooxidans ATCC 23270]
          Length = 486

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      A+AI L +         +         +  +    S V+    + 
Sbjct: 40  NIPLLSAAMDTVTEAAMAIGLAQEGGIGIIHKNMSPDQQAALVRRVKKFESGVIKDPITT 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    + + + +++      V VVD G++L+GI+T  D+      D     V  VM 
Sbjct: 100 ---RADVSIREVLQVMAVHGISGVPVVD-GERLEGIVTHRDLRFETRMD---APVSSVMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E T L V   LL QH I  ++VV+D  +  G++   D+ + 
Sbjct: 153 PRERLVTVPEGTSLDVTKALLHQHRIEKILVVNDRFELRGLITVKDIRKA 202


>gi|146304239|ref|YP_001191555.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145702489|gb|ABP95631.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 128

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
            V+    L +   ++ EK  G V V D   + KGI T+ D  R      + +  +  V  
Sbjct: 14  QVEANTTLQETCKLMLEKGVGSVIVTD-NGEPKGIFTDRDAVRAIANGASAMDELRTVAT 72

Query: 291 -KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +   + E+  +  A +L+ +  I  L V +   + +G++   DL
Sbjct: 73  MHDLVTVNEEVDIIQAAKLMAEKKIRHLPVTNSNGEIVGMISVTDL 118



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 44/120 (36%), Gaps = 4/120 (3%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-FSENDFYVLHPGGK 212
                +++ P         L  T   +++  +G  +     E +  F++ D       G 
Sbjct: 2   KRVKDIMSSPVFQVEANTTLQETCKLMLEKGVGSVIVTDNGEPKGIFTDRDAVRAIANGA 61

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                +     MH    +  V     +I A  +++EK+   + V +   ++ G+I+  D+
Sbjct: 62  SAMDELRTVATMH---DLVTVNEEVDIIQAAKLMAEKKIRHLPVTNSNGEIVGMISVTDL 118


>gi|221069051|ref|ZP_03545156.1| transcriptional regulator, RpiR family [Comamonas testosteroni
           KF-1]
 gi|264676816|ref|YP_003276722.1| RpiR family transcriptional regulator [Comamonas testosteroni
           CNB-2]
 gi|299529638|ref|ZP_07043075.1| transcriptional regulator, RpiR family protein [Comamonas
           testosteroni S44]
 gi|220714074|gb|EED69442.1| transcriptional regulator, RpiR family [Comamonas testosteroni
           KF-1]
 gi|262207328|gb|ACY31426.1| transcriptional regulator, RpiR family [Comamonas testosteroni
           CNB-2]
 gi|298722501|gb|EFI63421.1| transcriptional regulator, RpiR family protein [Comamonas
           testosteroni S44]
          Length = 281

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G SG +           G  S              ++   D ++++S SG + 
Sbjct: 132 RIEFYGAGNSGIVALDAQHKFFRLGVTSLATSDGHMQVMSATLLGPGDCVVIISNSGRTR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +L      AR+     IAIT+   S +A    + L          +  +P  S ++ L I
Sbjct: 192 DLMDAADIARKNGATTIAITASG-SPLASACQVHLAADHPEGYDRY--SPMVSRLLHLLI 248

Query: 186 GDALAIALLESRN 198
            D LA  +     
Sbjct: 249 IDVLATCVALRIG 261


>gi|76818811|ref|YP_335166.1| HPP family protein [Burkholderia pseudomallei 1710b]
 gi|76583284|gb|ABA52758.1| HPP family protein [Burkholderia pseudomallei 1710b]
          Length = 346

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 131 HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 182

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 183 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 241

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 242 RVVGIVTRADLSKA 255



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 213 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 272

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 273 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 332

Query: 336 LRFGI 340
           +  G+
Sbjct: 333 I-AGL 336


>gi|51243981|ref|YP_063865.1| hypothetical protein DP0129 [Desulfotalea psychrophila LSv54]
 gi|50875018|emb|CAG34858.1| hypothetical protein DP0129 [Desulfotalea psychrophila LSv54]
          Length = 437

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 4/129 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  V    P+     I+ EK    + +V E  +++G++   D  +
Sbjct: 309 NSNHHVQIADIMSFPVVSVPPTMPMRKVREIMDEKNIRGI-IVAEDDQIEGVVVLCDFKK 367

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              ++     V+  M +    I  DT  ++A +++    I  L VV    K IGIV   D
Sbjct: 368 IKKENQWNSPVKAFMTRGVTTITPDTPPSIAAEIMSDQGIGYLPVV-HENKMIGIVTRTD 426

Query: 335 LLR--FGII 341
           ++R  +G++
Sbjct: 427 VIRYIYGLV 435


>gi|302336892|ref|YP_003802098.1| signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
 gi|301634077|gb|ADK79504.1| putative signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
          Length = 214

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   +     + DA+ ++ +++   + V+D+ +KL GI++E D+             
Sbjct: 7   MTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLLYASPSPASTLSV 66

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L V+ VM K    + E TL+  A +++   N+  L V+      +GI+   
Sbjct: 67  YEMSALLARLKVKKVMTKEVITVTEQTLIEDAARIMVDKNVGGLPVM-RDGLLVGIITES 125

Query: 334 DLLRF 338
           D+ + 
Sbjct: 126 DIFKL 130



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++V  VM  NP  I +DT +  AM L+ +  +  L V+D  +K +GIV   DLL
Sbjct: 1   MTVSRVMTHNPFTISDDTAVADAMALIHKEKVHRLPVLDKERKLVGIVSEKDLL 54



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               +  V     + DA  I+ +K  G + V+     L GIITE DIF+ F +   T  
Sbjct: 82  MTKEVITVTEQTLIEDAARIMVDKNVGGLPVM-RDGLLVGIITESDIFKLFSELFGTRK 139


>gi|241764265|ref|ZP_04762296.1| inosine-5'-monophosphate dehydrogenase [Acidovorax delafieldii 2AN]
 gi|241366388|gb|EER60910.1| inosine-5'-monophosphate dehydrogenase [Acidovorax delafieldii 2AN]
          Length = 489

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +         +  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNLTPQEQAAHVAKVKRYESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  +       V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLELSEQLGISGFPVCD-GGKVVGIVTSRDLRFETRYDV---KVHQIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E    + A  LL ++ +  L+VV+D  +  G++   D+ +
Sbjct: 153 PREKLITVKEGASASEAKALLNKYKLERLLVVNDDFELKGLITVKDITK 201


>gi|148270665|ref|YP_001245125.1| RpiR family transcriptional regulator [Thermotoga petrophila RKU-1]
 gi|147736209|gb|ABQ47549.1| transcriptional regulator, RpiR family [Thermotoga petrophila
           RKU-1]
          Length = 266

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 4/133 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  E   L  L+ +L  +       AVE I +   R++  G+G SG +    +   +  G
Sbjct: 87  IDEEIDILRRLKDTLDMK---NVEKAVEWILSAH-RILFFGVGLSGVVSEYASLKFSLLG 142

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +FF +       +   +T DDL+I +S +G+  +       A+      IAIT+  +S
Sbjct: 143 FHTFFSNDPHVQVIEAVNLTGDDLVISISHTGNIRDTVKSTQVAKDMGAKTIAITTNRQS 202

Query: 151 VVACHADIVLTLP 163
            +A  A +VL  P
Sbjct: 203 ELARVAHLVLQSP 215


>gi|224062121|ref|XP_002300765.1| predicted protein [Populus trichocarpa]
 gi|222842491|gb|EEE80038.1| predicted protein [Populus trichocarpa]
          Length = 209

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 65/140 (46%), Gaps = 12/140 (8%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-----VKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           P G+ G   +  +DV+ +     L      +    + DA+  +++   G + V+ E + +
Sbjct: 46  PVGEKGLENLTVADVLVTKGEEKLGSWLWCRTTDTVYDAVKNMAQNNIGSLVVLGERELI 105

Query: 264 KGIITEGD-IFRNFHKDLNT--LSVEDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLM 318
            GIITE D + +   +  ++    V ++M        +  DT +  AM+L+  ++I  + 
Sbjct: 106 AGIITERDYLRKIIAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMTDNHIRHVP 165

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D      G+V  +D++R 
Sbjct: 166 VID--GTIAGMVSMVDVVRA 183



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/78 (14%), Positives = 32/78 (41%), Gaps = 2/78 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          + +    ++M   + +  V     ++ A+ ++++     V V+D
Sbjct: 109 ITERDYLRKIIAQGRSSKYTRVGEIMTDENKLITVASDTNILQAMKLMTDNHIRHVPVID 168

Query: 259 EGQKLKGIITEGDIFRNF 276
               + G+++  D+ R  
Sbjct: 169 --GTIAGMVSMVDVVRAV 184


>gi|221633691|ref|YP_002522917.1| srebp protease/cbs domain [Thermomicrobium roseum DSM 5159]
 gi|221156415|gb|ACM05542.1| srebp protease/cbs domain [Thermomicrobium roseum DSM 5159]
          Length = 389

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 48/128 (37%), Gaps = 4/128 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  LF             P ++    + + +  L         VV E  +L GI+T  D+
Sbjct: 236 IRRLFEGVHVGQLMDPDPPTIRPDATIDELVDALLAYNVRSFPVV-EDGRLVGIVTLTDV 294

Query: 273 FRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                +      V D+M           +  L   ++L+  H I  + +VDD  + +G++
Sbjct: 295 RHAPREQWPIRRVRDLMTPRERLITAKPEDDLERILRLMATHEIHQIPIVDDS-RLLGLL 353

Query: 331 HFLDLLRF 338
               LLRF
Sbjct: 354 TRNALLRF 361


>gi|156972998|ref|YP_001443905.1| mannose-1-phosphate guanyltransferase [Vibrio harveyi ATCC
           BAA-1116]
 gi|156524592|gb|ABU69678.1| hypothetical protein VIBHAR_00676 [Vibrio harveyi ATCC BAA-1116]
          Length = 352

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L+     +++A+ I++ +      VVDE Q L G++T+GDI R    +L  T  +  
Sbjct: 6   KNVLLTPTATILEALEIINREALRVALVVDEHQHLLGVVTDGDIRRGLLSNLPLTDPIAM 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM  NP      T     + L+    I  + ++ + Q  +G+    
Sbjct: 66  VMNTNPTTASVGTEREELIDLMESKGILSVPLLKNAQ-VVGLETLQ 110



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 25/45 (55%), Gaps = 1/45 (2%)

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
                +  A++++ +  + V +VVD+ Q  +G+V   D+ R G++
Sbjct: 11  TPTATILEALEIINREALRVALVVDEHQHLLGVVTDGDI-RRGLL 54


>gi|317970073|ref|ZP_07971463.1| CBS [Synechococcus sp. CB0205]
          Length = 154

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               I  V    PL +A+ ++S+     + VVD    L G +TE D+             
Sbjct: 11  MTTPIRSVGRETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLMVRESGFDAGPYV 70

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           +  H+ L   SV +VM + P     DTLL  A +LL +     L
Sbjct: 71  MLLDAVIYLRNPLQWDKQVHQVLGN-SVGEVMSQAPHTCSGDTLLPEAARLLHEKGTQRL 129

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+D+ ++ +G++   D++R 
Sbjct: 130 FVLDEQRRPVGVLTRGDVVRA 150



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM    + +  +T L  A+Q++  H+IS L VVD     +G +   DL+
Sbjct: 7   VSEVMTTPIRSVGRETPLQNAVQVMSDHHISGLPVVDAAGALVGELTEQDLM 58



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 23/52 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              +         L +A  +L EK    + V+DE ++  G++T GD+ R   
Sbjct: 101 MSQAPHTCSGDTLLPEAARLLHEKGTQRLFVLDEQRRPVGVLTRGDVVRALA 152


>gi|150025026|ref|YP_001295852.1| hypothetical protein FP0944 [Flavobacterium psychrophilum JIP02/86]
 gi|149771567|emb|CAL43038.1| Protein of unknown function [Flavobacterium psychrophilum JIP02/86]
          Length = 636

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVM 289
           +V     + +   I+++       + +   KL GI+T+ D         + +   ++ +M
Sbjct: 178 IVTYDQTIREVAIIMADNLLDAAFI-NNNTKLVGIVTDADFREKVATGKHAIQSHIDKIM 236

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIVHFLDLLRF 338
                 + E+  L  A  ++  H +  L V  D     +  GI+   DL++ 
Sbjct: 237 THAVITVPENISLAEAQLVMLSHKVHHLCVTIDGTIYTQIKGIITQNDLVQA 288



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---Q 261
                    G   + +        ++  V     L +A  ++   +   + V  +G    
Sbjct: 215 ADFREKVATGKHAIQSHIDKIMTHAVITVPENISLAEAQLVMLSHKVHHLCVTIDGTIYT 274

Query: 262 KLKGIITEGDIFRN 275
           ++KGIIT+ D+ + 
Sbjct: 275 QIKGIITQNDLVQA 288


>gi|262192492|ref|ZP_06050643.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae CT 5369-93]
 gi|262031651|gb|EEY50238.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae CT 5369-93]
          Length = 487

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|239932591|ref|ZP_04689544.1| hypothetical protein SghaA1_30498 [Streptomyces ghanaensis ATCC
           14672]
          Length = 222

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 55/140 (39%), Gaps = 20/140 (14%)

Query: 217 FVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-- 272
                 ++    +  +V +G   P  + + ++  +    + V+++G ++ G+++E D+  
Sbjct: 1   MHGVPHIVRDVMTRSVVSVGRQTPFKEIVRLMRGRGVSALPVLEDGDRVVGVVSEADLLP 60

Query: 273 --------------FRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                          R     L    L+ E++M      +     L+ A  L+ +H +  
Sbjct: 61  KEEFRDSDPDRRTQRRRLPDLLKAGALTAEELMTSPAVTVRAGVTLSDAAGLMTRHRVKR 120

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L VVD      G+V   DLL
Sbjct: 121 LPVVDGRGALEGVVSRADLL 140



 Score = 43.0 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 7/105 (6%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLF-------VCASDVMHSGDSIPLVKIGCP 238
           GD +   + E+    + +F    P  +               +           V+ G  
Sbjct: 46  GDRVVGVVSEADLLPKEEFRDSDPDRRTQRRRLPDLLKAGALTAEELMTSPAVTVRAGVT 105

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           L DA  +++  R   + VVD    L+G+++  D+   F +D   L
Sbjct: 106 LSDAAGLMTRHRVKRLPVVDGRGALEGVVSRADLLEVFLRDDEEL 150


>gi|186683293|ref|YP_001866489.1| Cl- channel, voltage-gated family protein [Nostoc punctiforme PCC
           73102]
 gi|186465745|gb|ACC81546.1| Cl- channel, voltage-gated family protein [Nostoc punctiforme PCC
           73102]
          Length = 863

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPK 294
                +A+   S        V+ E  K+ GI+T+ ++     + L    ++ ++M   P 
Sbjct: 464 QMSTDEAVQAFSHSHHRNFPVL-ENGKVVGIVTQKNLVNIASEQLGKDTTIGEIMTPEPV 522

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +     L   + +L ++++S L V  + +K IGI+   D++R
Sbjct: 523 TVTPTATLAHVLHILNRYHLSCLPVT-ENRKLIGIITRSDIIR 564


>gi|327311333|ref|YP_004338230.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947812|gb|AEA12918.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 128

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 49/110 (44%), Gaps = 4/110 (3%)

Query: 231 PLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
            +V       +  A++ +     G V VVD+     GI TE D+ +   + ++    +E 
Sbjct: 10  RVVYCTTRDTIRCAVSKMYAYNIGAVLVVDDVGSPVGIFTERDLVKVVAEGISLDTPLEK 69

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  K       +  + +A Q + +HNI  + VV +  + +GI+   D LR
Sbjct: 70  LAPKELIKAYPNESVFMAAQKMIEHNIRHIPVV-EGNRVVGILSIRDALR 118



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+++M            +  A+  +  +NI  ++VVDD    +GI    DL++
Sbjct: 3   VKNIMSDRVVYCTTRDTIRCAVSKMYAYNIGAVLVVDDVGSPVGIFTERDLVK 55


>gi|302525541|ref|ZP_07277883.1| signal-transduction protein [Streptomyces sp. AA4]
 gi|302434436|gb|EFL06252.1| signal-transduction protein [Streptomyces sp. AA4]
          Length = 143

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           A  +   G ++  V  G  + + +  L+    G + VVD    + GI++E D+ R  +  
Sbjct: 4   ADVLQRKGATVATVSPGTTVAELLAGLARHNVGAMVVVDAEGGIAGIVSERDVVRKLNDH 63

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +    V D+M         D  +     ++ +  I  + V+D   +  GIV   D++
Sbjct: 64  GPAVLEGPVADIMTTMVASCTPDDPVDRLSVVMTERRIRHVPVLD-GGRLAGIVSIGDVV 122

Query: 337 RF 338
           + 
Sbjct: 123 KI 124


>gi|308234697|ref|ZP_07665434.1| 6-phospho-3-hexuloisomerase [Gardnerella vaginalis ATCC 14018]
 gi|311115123|ref|YP_003986344.1| SIS domain-containing protein [Gardnerella vaginalis ATCC 14019]
 gi|310946617|gb|ADP39321.1| SIS domain protein [Gardnerella vaginalis ATCC 14019]
          Length = 184

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 63/177 (35%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  +            +EKIK  + R+V  G+G+ G         L   G  S ++ 
Sbjct: 10  LNELHQTFDVMNYSSIDEVIEKIKFAR-RIVCAGVGREGLTCRAFCMRLMHLGYSSHWIW 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A       I++ D+      SG  + L  +   A+     LI +T    S  A  +D
Sbjct: 69  DDTAP-----SISKGDVFFFTCGSGEIEHLLTVARLAKESGATLICVTGVPDSSAAKLSD 123

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQL------AIGDALAIALLESRNFSENDFYVLH 208
           + + +P         L PT   +  L         D++  A+  S + +  D    H
Sbjct: 124 LTIFIPASVYKGKGDLVPTIHPMGTLWETASWIFLDSVIYAIHSSESITYEDMSYRH 180


>gi|254172424|ref|ZP_04879099.1| CBS-domain-containing protein [Thermococcus sp. AM4]
 gi|214033353|gb|EEB74180.1| CBS-domain-containing protein [Thermococcus sp. AM4]
          Length = 175

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTL 283
                +VK    +     IL+  R G   VV E  ++ G++T+ DI        KD   +
Sbjct: 11  KRKAIIVKPDDTVHKVAKILARNRVGSAVVV-ENDEIVGVVTDRDILDKVVAKGKDPKKV 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+D+M +NP  I +D  ++ A+  + +  I  L+V     + +G V   DLL  
Sbjct: 70  KVKDIMTQNPVTIEDDYSISDAIDRMMEKGIRRLLVT-RLGRPLGFVTAADLLSA 123



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +SV  ++ +   ++  D  +    ++L ++ +   +VV++ +  +G+V   D+L
Sbjct: 1   MAEISVGQIVKRKAIIVKPDDTVHKVAKILARNRVGSAVVVENDE-IVGVVTDRDIL 56


>gi|169830987|ref|YP_001716969.1| diguanylate cyclase [Candidatus Desulforudis audaxviator MP104C]
 gi|169637831|gb|ACA59337.1| diguanylate cyclase [Candidatus Desulforudis audaxviator MP104C]
          Length = 287

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              S+  V     +  AI ++   R G + VVD+G  L GI+T  D+       L    V
Sbjct: 7   MSQSLVTVSSDRSVRAAIELMHRMRIGSLPVVDDGW-LVGIVTSRDVRGAHPNRL----V 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            DVM  +   +  ++ L  A +LL +H I  L+VV+     +GIV 
Sbjct: 62  ADVMRVDVVTVSAESSLWEAKELLERHGIERLVVVERD-SPVGIVT 106



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + V+D+M ++   +  D  +  A++L+ +  I  L VVDD    +GIV   D
Sbjct: 1   MRVQDIMSQSLVTVSSDRSVRAAIELMHRMRIGSLPVVDD-GWLVGIVTSRD 51


>gi|167755059|ref|ZP_02427186.1| hypothetical protein CLORAM_00563 [Clostridium ramosum DSM 1402]
 gi|237735216|ref|ZP_04565697.1| conserved hypothetical protein [Mollicutes bacterium D7]
 gi|167705109|gb|EDS19688.1| hypothetical protein CLORAM_00563 [Clostridium ramosum DSM 1402]
 gi|229380961|gb|EEO31052.1| conserved hypothetical protein [Coprobacillus sp. D7]
          Length = 277

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 3/140 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           + Q   A++K+ A    + + G+G S  +   +   L   G    +             +
Sbjct: 115 TNQLDNAIKKLIAANT-IYLFGVGGSAIVAQDVEQKLTRIGKKVIYNKDLHVQLTFSESM 173

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            ++D  + +S+SG++  L  I    +  ++P+I+IT    + ++  +DI+L +P E +  
Sbjct: 174 NKEDAALFISYSGTTKGLVEIAKMIKNKNVPIISITQFKPNPLSKLSDIILQVPNEEKEI 233

Query: 170 PHGLAPTTSAIMQLAIGDAL 189
             G    +S I  L + D L
Sbjct: 234 RMGAI--SSRISSLVMTDLL 251


>gi|242055665|ref|XP_002456978.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
 gi|241928953|gb|EES02098.1| hypothetical protein SORBIDRAFT_03g046640 [Sorghum bicolor]
          Length = 428

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           HP     T       +  +      +    P+ +A   ++ +R   V + D    L GI+
Sbjct: 42  HPSSAAETPERTVKKLRLARALT--LPEATPVSEACRRMAARRVDAVLLTDASGMLSGIL 99

Query: 268 TEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T  DI  R   + L  +   +  VM +NP  ++ ++    A+Q + Q     L VV +  
Sbjct: 100 TAEDIAGRVIAEGLKPDETYMAKVMTRNPVFVMSNSSAIEALQKMVQGKFRHLPVV-EHG 158

Query: 325 KAIGIVHFL 333
           + I +V   
Sbjct: 159 EVIAMVDIK 167


>gi|126179737|ref|YP_001047702.1| signal-transduction protein [Methanoculleus marisnigri JR1]
 gi|125862531|gb|ABN57720.1| putative signal-transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 187

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 5/125 (4%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
                             + +G  +  A  I+     G   V+ +     GI+TE DI  
Sbjct: 9   RFETRIPVREVMQSHPTTIDVGETVARAAQIMCRDEVGSCIVL-QNNLPTGIVTEEDINC 67

Query: 274 RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   KDL    + V ++M      I  D L+  A  ++ +H +  L VV + Q  IGIV 
Sbjct: 68  KVVAKDLKPGDIRVSEIMSTPLITIGADKLVGDAAAMMVKHRVRRLPVV-EDQMVIGIVT 126

Query: 332 FLDLL 336
             D+L
Sbjct: 127 VRDIL 131


>gi|116490247|ref|YP_809791.1| hexulose-6-phosphate isomerase [Oenococcus oeni PSU-1]
 gi|290889629|ref|ZP_06552719.1| hypothetical protein AWRIB429_0109 [Oenococcus oeni AWRIB429]
 gi|116090972|gb|ABJ56126.1| 3-hexulose-6-phosphate isomerase [Oenococcus oeni PSU-1]
 gi|290480827|gb|EFD89461.1| hypothetical protein AWRIB429_0109 [Oenococcus oeni AWRIB429]
          Length = 180

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 10/168 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           +++  ++  +   AVEKI + + R+ + G G+SG +    A  L   G   + +      
Sbjct: 12  TTVMDDVDEKQLQAVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYVIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG++  +      A +  + ++A+TS ++S +A ++D+ L +
Sbjct: 72  -----SIAAGDVLVSVSGSGTTGSVLEPTEKAHQNGVEIVAVTSNSQSPLAKNSDVALIV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           P   ++        L  T          D L + L   R+ + ND   
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQTTHITLDILTLMLS-RRDNTSNDAAK 173


>gi|326332849|ref|ZP_08199107.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
 gi|325949407|gb|EGD41489.1| CBS domain protein [Nocardioidaceae bacterium Broad-1]
          Length = 143

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 47/107 (43%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           +     + D + +L+E   G   V  +G  + GI++E D+ R  H++  L    V  +M 
Sbjct: 18  IASTATVRDLLGVLAEHGIGACVVSSDGAAVAGIVSERDVVRRLHENDALLAAEVSSIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +    D  +   + ++ +  I  + VV      +GIV   DL++
Sbjct: 78  AEVETCAPDATIDEILGIMTKRRIRHMPVV-ADGALVGIVSIGDLVK 123



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 + + + I++++R   + VV     L GI++ GD+ ++
Sbjct: 83  CAPDATIDEILGIMTKRRIRHMPVV-ADGALVGIVSIGDLVKH 124


>gi|315925556|ref|ZP_07921766.1| transcriptional regulator [Pseudoramibacter alactolyticus ATCC
           23263]
 gi|315621097|gb|EFV01068.1| transcriptional regulator [Pseudoramibacter alactolyticus ATCC
           23263]
          Length = 281

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/188 (20%), Positives = 72/188 (38%), Gaps = 7/188 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
             T     L ++  ++     II+     +  ++  L  ++      A++ I+A   R++
Sbjct: 79  PSTSINDELSRHDNLETIKHKIISHTLTAIHDIDVLLPEKI---LTQAIDAIRAA-NRLL 134

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+G SG I           G            +        DDL++ +S +G S+E+ 
Sbjct: 135 IYGVGASGAIALDAYHKFGGIGLDVCTYPDPHLMNITCSHAVPDDLMLAISHTGESNEVL 194

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             +  A+   + +I +TS   S +A  +D+ L          +      S I+QL I D 
Sbjct: 195 HAVRIAKERGVTVIGLTSFANSTLAKLSDLYLLSS--TNDKKYHSEAMASRIVQLTIVDI 252

Query: 189 LAIALLES 196
           L  A    
Sbjct: 253 LYTATFMQ 260


>gi|326316680|ref|YP_004234352.1| inosine-5'-monophosphate dehydrogenase [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323373516|gb|ADX45785.1| inosine-5'-monophosphate dehydrogenase [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 489

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 61/169 (36%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +         +  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNLTAQEQAAHVAKVKRYESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  +       V D   K+ GI+T  D+      D+    V D+M 
Sbjct: 97  VVITPEHTVLQVLQMSEQLGISGFPVCDA-GKVIGIVTGRDLRFETRYDV---KVRDIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E    + A  LL +H +  L+V++D  +  G++   D+ +
Sbjct: 153 PREKLITVKEGATASEAKALLNKHKLERLLVINDAFELKGLITVKDITK 201


>gi|239906018|ref|YP_002952757.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
           RS-1]
 gi|239795882|dbj|BAH74871.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
           RS-1]
          Length = 820

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/107 (26%), Positives = 54/107 (50%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           V     + +A+T ++++   C+ +V    +  GIITE D+ R   +   L  L + D+M 
Sbjct: 147 VDGNITVREAVTRMADRSISCL-IVARDGRPAGIITERDVVRLLSESPHLGRLRLYDIMS 205

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  D  +  A  ++R+  +  L+VVDD  + +G+V   D++R
Sbjct: 206 CPVVCVEADRPVFEAALVMRKRRMRRLVVVDDDLRVMGLVTQSDIVR 252



 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
               +  V     L++A  +L++KR   + +VDE    KG++T+ D+      D      
Sbjct: 75  MSAPVVTVGEEASLVEAYHLLAQKRLRHLVMVDEAGTAKGVLTQSDLIERLGYDSLAEIK 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V ++M +    +  +  +  A+  +   +IS L+V     +  GI+   D++R 
Sbjct: 135 RVSEIMTREVVAVDGNITVREAVTRMADRSISCLIVA-RDGRPAGIITERDVVRL 188



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 5/117 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTL 283
              +  +    P    + I+  +   C+ VV E  K  GI+TE ++         D    
Sbjct: 11  TPDVIFIAPDAPASLGLDIMRRRGISCL-VVAEAGKPVGIVTERNVLWAAAHTGGDFAQR 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL-RFG 339
            + ++M      + E+  L  A  LL Q  +  L++VD+   A G++   DL+ R G
Sbjct: 70  PISELMSAPVVTVGEEASLVEAYHLLAQKRLRHLVMVDEAGTAKGVLTQSDLIERLG 126



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++  +   I  D   ++ + ++R+  IS L VV +  K +GIV   ++L
Sbjct: 7   AEIITPDVIFIAPDAPASLGLDIMRRRGISCL-VVAEAGKPVGIVTERNVL 56



 Score = 43.0 bits (100), Expect = 0.075,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +  V+   P+ +A  ++ ++R   + VVD+  ++ G++T+ DI R   
Sbjct: 207 PVVCVEADRPVFEAALVMRKRRMRRLVVVDDDLRVMGLVTQSDIVRGLE 255


>gi|159039488|ref|YP_001538741.1| RpiR family transcriptional regulator [Salinispora arenicola
           CNS-205]
 gi|157918323|gb|ABV99750.1| transcriptional regulator, RpiR family [Salinispora arenicola
           CNS-205]
          Length = 304

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 6/162 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +      L   +  Q   A+     + GR+ + G G SG + S     L   G  +F
Sbjct: 121 ARAVEETAEQLDPAICEQIIDAI----TVAGRIDMYGAGASGFVASDFQQKLHRIGRTAF 176

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +     ++     ++ R D+ + +S +G++ ++  +L  AR      +A+T+  +S +A 
Sbjct: 177 YFPDVHSALTSAALLGRGDMAVGISHTGTTSDVIEVLEQARARGATTVALTNFPRSPIAE 236

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD++LT      +   G     S + QL + D L + +   
Sbjct: 237 VADLLLTTAARETTYRSGA--MASRLAQLTVVDCLFVGVAAR 276


>gi|20092371|ref|NP_618446.1| hypothetical protein MA3565 [Methanosarcina acetivorans C2A]
 gi|19917622|gb|AAM06926.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 155

 Score = 78.4 bits (192), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/144 (18%), Positives = 54/144 (37%), Gaps = 35/144 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +   K    + +A  +L E       V+ E  +L G+++E D+             
Sbjct: 8   MNPDVVFCKPDDTVREAAKLLKENNISGAPVL-EDGQLVGVVSEADLLELLVIPEKGNLW 66

Query: 274 ---------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                                +    D+ +  VE++M K    I  +  +  A +L+ +H
Sbjct: 67  LPSPFEVIEVPIRELLSWEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRH 126

Query: 313 NISVLMVVDDCQKAIGIVHFLDLL 336
            I+ L V+++  + +GIV   D++
Sbjct: 127 RINRLPVMEND-RVVGIVTRGDII 149



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + V+DVM  +      D  +  A +LL+++NIS   V+ +  + +G+V   DLL   +I
Sbjct: 2   MKVKDVMNPDVVFCKPDDTVREAAKLLKENNISGAPVL-EDGQLVGVVSEADLLELLVI 59



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                K+ +              +  +     + +A  ++   R   + V+ E  ++ GI
Sbjct: 84  WEETKKMLSDVGSTKVEEMMTKEVHTISSEASVEEASELMVRHRINRLPVM-ENDRVVGI 142

Query: 267 ITEGDIFRNFHK 278
           +T GDI     K
Sbjct: 143 VTRGDIIEGLAK 154


>gi|291453246|ref|ZP_06592636.1| RpiR-family transcriptional regulator [Streptomyces albus J1074]
 gi|291356195|gb|EFE83097.1| RpiR-family transcriptional regulator [Streptomyces albus J1074]
          Length = 307

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 69/188 (36%), Gaps = 5/188 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S        + +S      +    E++ L+   + L      Q    V+ +   + R+ 
Sbjct: 98  QSPAVTADIAVDDSLADVVAKLAYDEQQTLADTAAGLDT---AQLAACVDALAGAR-RID 153

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I GIG SG +   LA  L   G  +        +  +   +   D+ I ++ SG++ ++ 
Sbjct: 154 IYGIGASGLVAQDLAQKLLRIGLIAHAHADPHLAVTNAVQLRPRDVAIAITHSGTTGDVI 213

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A       IA+T      V+ +AD  L             A  +S   QL + D 
Sbjct: 214 EPLRTAFERGATTIAVTGRPDGAVSQYAD-HLLTTSTARESELRPAAMSSRTSQLLVVDC 272

Query: 189 LAIALLES 196
           L + + + 
Sbjct: 273 LFVGVAQR 280


>gi|229819889|ref|YP_002881415.1| RpiR family transcriptional regulator [Beutenbergia cavernae DSM
           12333]
 gi|229565802|gb|ACQ79653.1| transcriptional regulator, RpiR family [Beutenbergia cavernae DSM
           12333]
          Length = 285

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 63/157 (40%), Gaps = 3/157 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +E +L           V+ I    GR V  G+G SG   + L   L   G  +F      
Sbjct: 112 IEETLASLDIEHLERVVDAI-DTAGRSVTYGVGSSGSSAADLQRKLFRIGRVAFTFDDPH 170

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
            +     + +  D+ +  S SG++ E  A L  A +     +A+T+  +S +A  ADIVL
Sbjct: 171 DAVTAAALSSPGDVAVAFSHSGATREALAFLATAGKHGARTVAVTNSAESALARAADIVL 230

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
                      G     S I QL I D + + + + R
Sbjct: 231 VTSVRETQFRSGA--MASRIAQLMIVDCIFVGVAQRR 265


>gi|167723476|ref|ZP_02406712.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           DM98]
          Length = 261

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 46  HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 97

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 98  SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 156

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 157 RVVGIVTRADLSKA 170



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 128 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 187

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 188 RSLVGPAFVARAVMSTRVHTVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 247

Query: 336 LRFGI 340
           +  G+
Sbjct: 248 I-AGL 251


>gi|118431653|ref|NP_148269.2| 6-phospho-3-hexuloisomerase [Aeropyrum pernix K1]
 gi|152031733|sp|Q9YAK0|Y1940_AERPE RecName: Full=Uncharacterized protein APE_1940.1
 gi|116062976|dbj|BAA80949.2| 6-phospho-3-hexuloisomerase [Aeropyrum pernix K1]
          Length = 212

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 69/181 (38%), Gaps = 20/181 (11%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + +      +F   +E++   K +V++ G G+SG +G   A  L   G  S+ +      
Sbjct: 32  NEIDVGQVDRFVGELERVYREKRKVLVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVP 91

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 +   DL++ +S SG +  +      A++    + AIT+   S +   +DIV+ +
Sbjct: 92  -----SVREGDLVVAISGSGRTKVIVTAAETAKQVGATVAAITTYPDSPLGRLSDIVVRV 146

Query: 163 PKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVL 207
           P   +S                 LAP  +      +   D +  +L+      E     +
Sbjct: 147 PGRTKSSKMDDYFARQILGIHEPLAPLGTLFEDTTMVFLDGVIYSLMTRLGIDEEYMRNM 206

Query: 208 H 208
           H
Sbjct: 207 H 207


>gi|15598965|ref|NP_252459.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           PAO1]
 gi|107103289|ref|ZP_01367207.1| hypothetical protein PaerPA_01004358 [Pseudomonas aeruginosa PACS2]
 gi|116051795|ref|YP_789363.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|152983713|ref|YP_001346730.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|218889946|ref|YP_002438810.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           LESB58]
 gi|254236675|ref|ZP_04929998.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           C3719]
 gi|254242460|ref|ZP_04935782.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           2192]
 gi|296387716|ref|ZP_06877191.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           PAb1]
 gi|313109184|ref|ZP_07795153.1| inosine-5-monophosphate dehydrogenase [Pseudomonas aeruginosa
           39016]
 gi|9949941|gb|AAG07157.1|AE004796_2 inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           PAO1]
 gi|115587016|gb|ABJ13031.1| inosine-5-monophosphate dehydrogenase [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|126168606|gb|EAZ54117.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           C3719]
 gi|126195838|gb|EAZ59901.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           2192]
 gi|150958871|gb|ABR80896.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa PA7]
 gi|218770169|emb|CAW25931.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas aeruginosa
           LESB58]
 gi|310881655|gb|EFQ40249.1| inosine-5-monophosphate dehydrogenase [Pseudomonas aeruginosa
           39016]
          Length = 489

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +     ++  +    + ++      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMGIEQQAAEVRKVKKHETAIVR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     +I+ + +  E  F    VV E  +L GI+T  D+     K     +V  +M 
Sbjct: 98  VTVTPSTKIIELLQMAREYGFSGFPVV-EQGELVGIVTGRDLR---VKPNAGDTVAAIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                    E T L      L ++ I  ++VVD+     G+V F D+ +  
Sbjct: 154 PKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGLVTFRDIEKAK 204


>gi|121609044|ref|YP_996851.1| RpiR family transcriptional regulator [Verminephrobacter eiseniae
           EF01-2]
 gi|121553684|gb|ABM57833.1| transcriptional regulator, RpiR family [Verminephrobacter eiseniae
           EF01-2]
          Length = 285

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ + +         AV  +   + R+   G G SG +           G P     
Sbjct: 106 ITSLDWTRKKLDQDAIAKAVALLLKAR-RIEFFGFGASGIVALDAQQKFPLFGVPCIAHQ 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        M+  +D ++ +S +GS+  L  ++   +     ++ IT   +S +  +AD
Sbjct: 165 DSHQQLIAASMLNPEDAVVAISNTGSTRSLIEVVRTVKERGASVVVITGS-RSPITRYAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +    E     +   PT S +  L + D LAI++   R 
Sbjct: 224 ISIIA--ETLENTNIYTPTISRLAALVVMDILAISVAIQRG 262


>gi|15640786|ref|NP_230416.1| inosine 5'-monophosphate dehydrogenase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121585769|ref|ZP_01675564.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 2740-80]
 gi|121726063|ref|ZP_01679362.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae V52]
 gi|147673264|ref|YP_001216252.1| inosine 5'-monophosphate dehydrogenase [Vibrio cholerae O395]
 gi|153800587|ref|ZP_01955173.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae MZO-3]
 gi|153817293|ref|ZP_01969960.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae NCTC 8457]
 gi|153821369|ref|ZP_01974036.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae B33]
 gi|153824552|ref|ZP_01977219.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae MZO-2]
 gi|153828269|ref|ZP_01980936.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 623-39]
 gi|227080946|ref|YP_002809497.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae M66-2]
 gi|229505619|ref|ZP_04395129.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae BX 330286]
 gi|229510709|ref|ZP_04400188.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae B33]
 gi|229513094|ref|ZP_04402560.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae TMA 21]
 gi|229517831|ref|ZP_04407275.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae RC9]
 gi|229530103|ref|ZP_04419493.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae 12129(1)]
 gi|229608637|ref|YP_002879285.1| inosine 5'-monophosphate dehydrogenase [Vibrio cholerae MJ-1236]
 gi|254847904|ref|ZP_05237254.1| inositol-5-monophosphate dehydrogenase [Vibrio cholerae MO10]
 gi|298499100|ref|ZP_07008907.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae MAK 757]
 gi|9655214|gb|AAF93932.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae O1 biovar
           El Tor str. N16961]
 gi|121550132|gb|EAX60148.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 2740-80]
 gi|121631545|gb|EAX63915.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae V52]
 gi|124123876|gb|EAY42619.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae MZO-3]
 gi|126512209|gb|EAZ74803.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae NCTC 8457]
 gi|126521079|gb|EAZ78302.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae B33]
 gi|146315147|gb|ABQ19686.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae O395]
 gi|148876223|gb|EDL74358.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 623-39]
 gi|149741770|gb|EDM55799.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae MZO-2]
 gi|227008834|gb|ACP05046.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae M66-2]
 gi|227012591|gb|ACP08801.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae O395]
 gi|229333877|gb|EEN99363.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae 12129(1)]
 gi|229344546|gb|EEO09520.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae RC9]
 gi|229349987|gb|EEO14941.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae TMA 21]
 gi|229350674|gb|EEO15615.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae B33]
 gi|229357842|gb|EEO22759.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae BX 330286]
 gi|229371292|gb|ACQ61715.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae MJ-1236]
 gi|254843609|gb|EET22023.1| inositol-5-monophosphate dehydrogenase [Vibrio cholerae MO10]
 gi|297543433|gb|EFH79483.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae MAK 757]
          Length = 489

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 43  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 100 VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206


>gi|329765017|ref|ZP_08256604.1| CBS domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329138554|gb|EGG42803.1| CBS domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 604

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDV 288
           L+     +  A  +L +     + V+DE     GI+T+ DI     +    + T +++D+
Sbjct: 27  LLNQNTLIRGAAKMLQDSDRDDIIVIDENNLPIGIVTDEDIINKMSEITTRVETATLKDI 86

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M      I E T L  A+  +R   I  L V+    + +GI+
Sbjct: 87  MSTPLITINEKTTLQEALHKMRDSKIRKLPVLSKKNEVVGII 128



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 30/52 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   M K+  ++ ++TL+  A ++L+  +   ++V+D+    IGIV   D++
Sbjct: 17  IGAYMSKDFLLLNQNTLIRGAAKMLQDSDRDDIIVIDENNLPIGIVTDEDII 68


>gi|327405588|ref|YP_004346426.1| CBS domain-containing protein [Fluviicola taffensis DSM 16823]
 gi|327321096|gb|AEA45588.1| CBS domain containing protein [Fluviicola taffensis DSM 16823]
          Length = 333

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 63/127 (49%), Gaps = 5/127 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 D M      P++     +++ +  + + + G   V+++   LKG+I+  DI ++
Sbjct: 204 SQFVVKDFMIPLSESPVIDENSSVLEVLNAVEDGKLGFALVINKSADLKGLISNADIRKS 263

Query: 276 FHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH--NISVLMVVDDCQKAIGIV 330
             +   +LN  S+ ++M   P VI E   +   +Q ++++   I  L VVD   KA GI+
Sbjct: 264 LIRTKGNLNQESISEIMNGKPLVIQETATVNDLLQQIKKYSFPILYLPVVDSGNKAKGIL 323

Query: 331 HFLDLLR 337
            F++L++
Sbjct: 324 TFVNLIK 330


>gi|219870660|ref|YP_002475035.1| putative HTH-type transcriptional regulator [Haemophilus parasuis
           SH0165]
 gi|219690864|gb|ACL32087.1| putative HTH-type transcriptional regulator [Haemophilus parasuis
           SH0165]
          Length = 288

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q  L ++IAE   L                  VE+++    R+ + G+G SG       
Sbjct: 106 LQNTLNNVIAETVNLLDYAE---------LEKVVEELRKAD-RIFLFGVGSSGLTAEDAQ 155

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +  V      +    ++ + D++I +S SG S+E    L  +R      +A
Sbjct: 156 HKLMRIGLHAAAVTNNHFMYMQAALLKKGDIVIGISHSGYSEETTKALKISRDNGAKTVA 215

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IT   +S +   AD VL                 + + QL + D +   L+++
Sbjct: 216 ITHNLRSPITKEADYVLINGNRQG--HMQGDSIGTKMTQLFVLDLIYALLVKA 266


>gi|90417798|ref|ZP_01225710.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
 gi|90337470|gb|EAS51121.1| putative CBS domain protein [Aurantimonas manganoxydans SI85-9A1]
          Length = 143

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
           K    L + + +L+ +R G + + +E   + GI++E D+ R          + SV +VM 
Sbjct: 18  KPEATLEETMQVLANRRIGAIVLTNENGGVAGIVSERDVVRVLGTAGVGAISQSVGEVMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                  E T +  AM+++       L V ++  + +GI+   D+++  I
Sbjct: 78  SQVSTCTEATTVNQAMEMMTTGRFRHLPVCEND-RLVGIISIGDVVKQRI 126


>gi|297581166|ref|ZP_06943090.1| inositol-5-monophosphate dehydrogenase [Vibrio cholerae RC385]
 gi|297534482|gb|EFH73319.1| inositol-5-monophosphate dehydrogenase [Vibrio cholerae RC385]
          Length = 489

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 43  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 100 VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206


>gi|56478309|ref|YP_159898.1| hypothetical protein ebB175 [Aromatoleum aromaticum EbN1]
 gi|56314352|emb|CAI08997.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 147

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
               ++  +     + DA+  ++E   G + V+ EG++L GI++E D  R      +   
Sbjct: 11  KPDPTVHTIGPDASVFDALGRMAEHNVGALLVM-EGERLAGIVSERDYARKVILLARSSR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+V  +M      +  +      M L+ +  +  L VV+   + +GIV   DL++
Sbjct: 70  DLTVSAIMSSPVMYVSLNQTNEECMALMTEKRLRHLPVVESS-RVVGIVSIGDLVK 124


>gi|86138128|ref|ZP_01056703.1| CBS domain protein [Roseobacter sp. MED193]
 gi|85825155|gb|EAQ45355.1| CBS domain protein [Roseobacter sp. MED193]
          Length = 173

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 51/117 (43%), Gaps = 4/117 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   G +   +     L  A+T+L ++R G + V  EG  L+GI++E DI R   +    
Sbjct: 38  ISKKGGTTYTITSSDTLSTAVTVLRDRRIGALLVTGEGGALEGILSERDIVRKLAETPGQ 97

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +V + M    +       L   ++ + +     + VVDD  K  G++   D++
Sbjct: 98  TLPQTVGENMTSKVETCSPSDPLVAVLRRMNEGRFRHMPVVDD-GKLCGMLTIGDVV 153



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I     L+ A+ +LR   I  L+V  +     GI+   D++R 
Sbjct: 47  TITSSDTLSTAVTVLRDRRIGALLVTGEGGALEGILSERDIVRK 90


>gi|126641980|ref|YP_001084964.1| hypothetical protein A1S_1935 [Acinetobacter baumannii ATCC 17978]
          Length = 112

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 49/96 (51%), Gaps = 5/96 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIKNPKVILEDTLL 302
           ++EK  G + VV EG+++ GI++E D  R      +   + +V ++M      +  +  +
Sbjct: 1   MAEKGIGAL-VVAEGEQVVGILSERDYTRKVTLMERSSYSTTVAEIMTAKVITVGLNNTV 59

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +QL+   ++  L V+D+  K +G +   DL++ 
Sbjct: 60  EECLQLMTDRHLRHLPVLDN-GKLVGFISIGDLVKA 94



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 33/85 (38%), Gaps = 3/85 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE D+        +       +        +  V +   + + + +++++    + V+D
Sbjct: 21  LSERDYT--RKVTLMERSSYSTTVAEIMTAKVITVGLNNTVEECLQLMTDRHLRHLPVLD 78

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL 283
              KL G I+ GD+ +   +D   L
Sbjct: 79  -NGKLVGFISIGDLVKAAMEDQKVL 102


>gi|126459490|ref|YP_001055768.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249211|gb|ABO08302.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 141

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + D   +++E   G V +VD  + Q++ G+++E D+ R     ++     + +  K
Sbjct: 15  PSTSIRDVAKLMAENNVGLVVLVDPRDPQRVVGVVSERDVVRAVAYGIDLDQPCDIIATK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  D  L  A +  R+H I   +VV    K  G++   DL+R 
Sbjct: 75  RVITLEYDRSLAEAAEAFRKHGIRH-IVVTQGGKLYGVLSIRDLIRE 120



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 28/57 (49%), Gaps = 2/57 (3%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
            +     K        T +    +L+ ++N+ ++++VD  D Q+ +G+V   D++R 
Sbjct: 1   MIGQFAKKEVVKATPSTSIRDVAKLMAENNVGLVVLVDPRDPQRVVGVVSERDVVRA 57


>gi|113866093|ref|YP_724582.1| inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
 gi|113524869|emb|CAJ91214.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
          Length = 146

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLN 281
               +I  V     +  A+ +++EK  G + V+ E  ++ GI++E D  R      +   
Sbjct: 11  KPSQAIYSVPPTATVYTALQLMAEKGIGALLVI-EHGEILGILSERDYARKVILMQRTSR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V D+M      +         M L+ +H +  L V++  +  IG++   DL++
Sbjct: 70  ETLVRDIMTNAVIYVGASQTTDECMALMTRHRLRHLPVMEGDE-LIGMLSIGDLVK 124



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 19/130 (14%), Positives = 44/130 (33%), Gaps = 12/130 (9%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-----FSENDFYVLH 208
             A  VL               T    +QL     +   L+          SE D+    
Sbjct: 2   KTARQVLESKPSQAIYSVPPTATVYTALQLMAEKGIGALLVIEHGEILGILSERDYAR-- 59

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI--DAITILSEKRFGCVAVVDEGQKLKGI 266
               +         ++    +  ++ +G      + + +++  R   + V+ EG +L G+
Sbjct: 60  --KVILMQRTSRETLVRDIMTNAVIYVGASQTTDECMALMTRHRLRHLPVM-EGDELIGM 116

Query: 267 ITEGDIFRNF 276
           ++ GD+ ++ 
Sbjct: 117 LSIGDLVKDI 126


>gi|229523411|ref|ZP_04412818.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae TM
           11079-80]
 gi|229339774|gb|EEO04789.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae TM
           11079-80]
          Length = 489

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 43  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 100 VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206


>gi|330963663|gb|EGH63923.1| CBS domain-containing protein [Pseudomonas syringae pv. actinidiae
           str. M302091]
          Length = 146

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     ++DA+ ++++K  G + VV E   + G+++E D  R      +    
Sbjct: 14  HNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVLEGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M      +     +   M ++   ++  L VV +  + +G++   DL++  I
Sbjct: 73  TPVSEIMSSKVITVNSQQTVETCMGIMTDSHLRHLPVV-EDGQLLGLLSIGDLVKEAI 129



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L ++D+  ++   I  + ++  A++L+   NI  L VV +    +G+V   D  R  ++
Sbjct: 8   LKLKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVL 65


>gi|298714864|emb|CBJ25763.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 210

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 6/112 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDV- 288
           +     + +A+   +    G +AV ++ +K+ GI++E D         K   +  V+++ 
Sbjct: 73  ISEEATVYEAVQRFAAYNIGALAVTNDDKKVIGIVSERDYVSKVALLGKASKSTPVKEIA 132

Query: 289 -MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLLRF 338
            M  N  +  +   +   M  +   +I  L VVD+   + +G++   DLL+ 
Sbjct: 133 TMGANLVIASKSDTMQDCMAKMVARDIRHLPVVDEEKGQVVGMLSVKDLLKE 184


>gi|270299854|gb|ACZ68660.1| 6-phospho-3-hexuloisomerase [Staphylococcus aureus]
 gi|281334327|gb|ADA61411.1| 6-phospho-3-hexuloisomerase [Staphylococcus epidermidis]
          Length = 182

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 9/162 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +F   V ++     R+ I G G+SG + +  A  L   G  +F + 
Sbjct: 11  LDELKGTLSHVKDEEFDGFVSEVTEAS-RIFIAGKGRSGFVANSFAMRLNQLGKQAFVIG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I +DDL IV+S SGS++ L+ +   A+     ++ +T++  S +   AD
Sbjct: 70  ESTTP-----SIQKDDLFIVISGSGSTEHLRLLAEKAKSVDAKVVLLTTKLDSAIGEIAD 124

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLES 196
            V+ LP   +    G   P  S   Q      D++ I L+  
Sbjct: 125 TVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQ 166


>gi|228476578|ref|ZP_04061260.1| AcuB family protein [Streptococcus salivarius SK126]
 gi|228251773|gb|EEK10838.1| AcuB family protein [Streptococcus salivarius SK126]
          Length = 219

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ +K    + V+ E  KL G+ITEG +                +  L
Sbjct: 14  VSPETTVAAAADIMRDKGLRRLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+ R 
Sbjct: 73  NKTKVGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDNDQ-ISGIITDKDVFRA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  +T +  A  ++R   +  L V++   K +G++ 
Sbjct: 1   MAVKDFMTKRVVYVSPETTVAAAADIMRDKGLRRLPVIEHD-KLVGLIT 48



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+FR F
Sbjct: 88  VSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAF 130


>gi|23099677|ref|NP_693143.1| acetoin utilization protein [Oceanobacillus iheyensis HTE831]
 gi|22777907|dbj|BAC14178.1| acetoin utilization protein [Oceanobacillus iheyensis HTE831]
          Length = 215

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 44/111 (39%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------HKDLNTLSV 285
                + DA+ +L   +   + +V++  ++ GI+++ D+               +   ++
Sbjct: 15  PPKATINDALQLLQLHKIRHIPIVNDDFQVIGIVSDRDVRDASPSTFFEQPDIGILNNTI 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +M K    I     +     +     I+ L VV    + IGIV   D+L
Sbjct: 75  DSIMTKQVITIHPMDFVEEIAAIFYDREIACLPVV-SNNRLIGIVTEKDML 124



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M      +     +  A+QLL+ H I  + +V+D  + IGIV   D
Sbjct: 3   VEEIMKTEVITLPPKATINDALQLLQLHKIRHIPIVNDDFQVIGIVSDRD 52


>gi|313673354|ref|YP_004051465.1| cl- channel voltage-gated family protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312940110|gb|ADR19302.1| Cl- channel voltage-gated family protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 594

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H       +               ++K      D I  +   +     VVD   +L G++
Sbjct: 445 HKNEYFLMILQEIKVKDIMKKDPIVIKEDMKFDDIIHFIPTTKHNSFPVVDNENRLVGVL 504

Query: 268 TEGDIFR-NFHKDLNTLSVE-DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
              +I    F + L  L V  ++  K+   + ++  L  A++L+   N+ +L VVD+  +
Sbjct: 505 RFEEIREFVFEEGLEDLVVASEICDKDAPTVTKENNLAEAIELIGTRNVELLPVVDEENR 564

Query: 326 AIGIVHFLDLL 336
            IGIV   D++
Sbjct: 565 VIGIVTRRDII 575



 Score = 39.1 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 27/65 (41%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                      P V     L +AI ++  +    + VVDE  ++ GI+T  DI   ++K+
Sbjct: 522 VVASEICDKDAPTVTKENNLAEAIELIGTRNVELLPVVDEENRVIGIVTRRDIIATYNKE 581

Query: 280 LNTLS 284
           +    
Sbjct: 582 MLKQK 586


>gi|28901596|ref|NP_801251.1| hypothetical protein VPA1741 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153838195|ref|ZP_01990862.1| putative HTH-type transcriptional regulator YfhH [Vibrio
           parahaemolyticus AQ3810]
 gi|260363148|ref|ZP_05776017.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus K5030]
 gi|260880433|ref|ZP_05892788.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|260894801|ref|ZP_05903297.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|260900150|ref|ZP_05908545.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|28810143|dbj|BAC63084.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149748395|gb|EDM59254.1| putative HTH-type transcriptional regulator YfhH [Vibrio
           parahaemolyticus AQ3810]
 gi|308089415|gb|EFO39110.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus Peru-466]
 gi|308091835|gb|EFO41530.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AN-5034]
 gi|308110098|gb|EFO47638.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus AQ4037]
 gi|308112083|gb|EFO49623.1| transcriptional regulator, RpiR family protein [Vibrio
           parahaemolyticus K5030]
          Length = 283

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 3/165 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNALSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSSEDVQIAISYSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
                       H  +   S   Q  I D L I L++ R+ S   
Sbjct: 227 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRDESARQ 269


>gi|301631711|ref|XP_002944939.1| PREDICTED: bifunctional protein glk-like [Xenopus (Silurana)
           tropicalis]
          Length = 283

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 47/133 (35%), Gaps = 3/133 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+   G G SG +           G  S              ++  +D  +++S SG + 
Sbjct: 132 RIEFYGAGNSGIVAQDAQHKFFRLGVTSIAASDGHMQVMSATLLGPEDCAVIISNSGRTR 191

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +L      AR+     IAIT+   S +A    I L          +  +P  S +M L I
Sbjct: 192 DLMDAADIARKNGATTIAITASG-SPLASACHIHLAADHPEGYDRY--SPMVSRLMHLLI 248

Query: 186 GDALAIALLESRN 198
            D LA  +     
Sbjct: 249 IDVLATCVALRIG 261


>gi|326202075|ref|ZP_08191945.1| putative signal transduction protein with CBS domains [Clostridium
           papyrosolvens DSM 2782]
 gi|325987870|gb|EGD48696.1| putative signal transduction protein with CBS domains [Clostridium
           papyrosolvens DSM 2782]
          Length = 141

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 46/112 (41%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
              ++  V+    ++D   ++ +   G + V D+   + G++T+ DI        K+   
Sbjct: 7   MTTNVTYVEPNASIVDTAKLMQQHNVGSIPVCDK-GSVVGMVTDRDIVVRNIAIGKNPQQ 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             V D+M      +  D  ++   +++    I  + VVD     +GIV   D
Sbjct: 66  TPVSDIMTTGITSVSPDMEMSQVTKMMADSQIRRVPVVDQNN-LVGIVALGD 116



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M  N   +  +  +    +L++QHN+  + V D     +G+V   D++
Sbjct: 1   MKVKDIMTTNVTYVEPNASIVDTAKLMQQHNVGSIPVCDK-GSVVGMVTDRDIV 53


>gi|149013522|ref|ZP_01834154.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP19-BS75]
 gi|147762843|gb|EDK69795.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP19-BS75]
          Length = 203

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/143 (27%), Positives = 67/143 (46%), Gaps = 3/143 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   A++ I+    +++I G+G SG+   +  S+L   G  S  V           ++  
Sbjct: 41  QIELAIKLIREA-NQILIIGVGSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKD 99

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DLII  S SGS+ E++  L  A+R ++ +I+IT+ +   +A  +D VL   K+      
Sbjct: 100 NDLIIAFSLSGSTKEVEETLLNAKRKNVKIISITNYSSRNIAKLSDCVLLTSKKESYLEG 159

Query: 172 GLAPTTSAIMQLAIGDALAIALL 194
           G     +   QL I D +   L 
Sbjct: 160 GSL--MAKASQLFIIDVICTRLS 180


>gi|146320503|ref|YP_001200214.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
 gi|253751473|ref|YP_003024614.1| hypothetical protein SSUSC84_0586 [Streptococcus suis SC84]
 gi|253753374|ref|YP_003026515.1| hypothetical protein SSU0613 [Streptococcus suis P1/7]
 gi|253755797|ref|YP_003028937.1| hypothetical protein SSUBM407_1211 [Streptococcus suis BM407]
 gi|145691309|gb|ABP91814.1| hypothetical protein SSU98_0656 [Streptococcus suis 98HAH33]
 gi|251815762|emb|CAZ51364.1| conserved hypothetical protein [Streptococcus suis SC84]
 gi|251818261|emb|CAZ56069.1| conserved hypothetical protein [Streptococcus suis BM407]
 gi|251819620|emb|CAR45355.1| conserved hypothetical protein [Streptococcus suis P1/7]
 gi|292558105|gb|ADE31106.1| hypothetical protein SSGZ1_0647 [Streptococcus suis GZ1]
 gi|319757891|gb|ADV69833.1| hypothetical protein SSUJS14_0746 [Streptococcus suis JS14]
          Length = 218

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQDLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMIKN   +     L  A  L+ ++ + +L VVD+  +  G++   D+   
Sbjct: 73  NKTKVKDVMIKNVITVSGYASLEDAAYLMYKNKVGILPVVDN-GQLYGVITDRDIFAA 129



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M +    I  DT +  A  ++R+ ++  L V+++  K +G+V 
Sbjct: 1   MSVKDFMTRKVVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVT 48



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              ++  V     L DA  ++ + + G + VVD   +L G+IT+ DIF  F
Sbjct: 81  MIKNVITVSGYASLEDAAYLMYKNKVGILPVVD-NGQLYGVITDRDIFAAF 130


>gi|330876235|gb|EGH10384.1| CBS domain-containing protein [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
          Length = 146

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     ++DA+ ++++K  G + VV E   + G+++E D  R      +    
Sbjct: 14  HNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVLKGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M      +     +   M ++   ++  L VV +  + +G++   DL++  I
Sbjct: 73  TPVSEIMSSKVITVNSQQTVETCMGIMTDSHLRHLPVV-EDGQLLGLLSIGDLVKEAI 129



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L ++D+  ++   I  + ++  A++L+   NI  L VV +    +G+V   D  R  ++
Sbjct: 8   LKLKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVL 65


>gi|328469525|gb|EGF40471.1| hypothetical protein VP10329_11591 [Vibrio parahaemolyticus 10329]
          Length = 283

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 3/165 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNALSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSSEDVQIAISYSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
                       H  +   S   Q  I D L I L++ R+ S   
Sbjct: 227 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRDESARQ 269


>gi|322368385|ref|ZP_08042954.1| chloride channel [Haladaptatus paucihalophilus DX253]
 gi|320552401|gb|EFW94046.1| chloride channel [Haladaptatus paucihalophilus DX253]
          Length = 630

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 40/113 (35%), Gaps = 9/113 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------HKDLNTLSV 285
                + DAI  +     G   VVD    L GI+T  D+             +     +V
Sbjct: 511 PAELSVEDAIPTIRTSDHGGFPVVDSEGNLAGIVTLTDLEPFMSGRAEGETERPEAEQTV 570

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DV   +   +     L   +  +   +I  L VV+D    +GIV   D+L  
Sbjct: 571 GDVCTTDVHTVTPGENLLSVVDKMESFDIGRLPVVEDGG-VVGIVTRSDVLDA 622



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 22/56 (39%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  L+  DVM      +  +  +  A+  +R  +     VVD      GIV   DL
Sbjct: 494 LEDLTASDVMTTTVDTLPAELSVEDAIPTIRTSDHGGFPVVDSEGNLAGIVTLTDL 549


>gi|295402673|ref|ZP_06812617.1| transcriptional regulator, RpiR family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294975288|gb|EFG50922.1| transcriptional regulator, RpiR family [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 270

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 54/130 (41%), Gaps = 1/130 (0%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           +SL+ + Q   S +    V +I   K +V   G+  S  I           G  +     
Sbjct: 108 TSLKQTEQLLRSKEIIQVVHEIHRSK-KVAFFGVTFSHLIARNAQFKFIRLGKYATAYSN 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            E    +   +T  DL +V+S+SG +  +  ++   ++  IP++AIT   K  +A HA  
Sbjct: 167 HENQISEAESLTPRDLAVVISFSGETRFIVQLVKILKKRGIPIVAITGNEKGYLAQHAKQ 226

Query: 159 VLTLPKEPES 168
           ++ +      
Sbjct: 227 IIKVSSCKLE 236


>gi|154496373|ref|ZP_02035069.1| hypothetical protein BACCAP_00661 [Bacteroides capillosus ATCC
           29799]
 gi|150274456|gb|EDN01533.1| hypothetical protein BACCAP_00661 [Bacteroides capillosus ATCC
           29799]
          Length = 142

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
              G + V     +L+GI+T+ DI        +D  +  V ++M +N  V+  +     A
Sbjct: 30  HNIGSLPVCGTDGRLRGIVTDRDIVLRCVAAEEDPASTPVREIMSRNCAVVSPEDDAREA 89

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++    +  L V D   K +G+V   DL
Sbjct: 90  SRMMAAAQVRRLPVTDGD-KVVGMVSLGDL 118



 Score = 39.1 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D+M  +   I       +A +LL +HNI  L V     +  GIV   D++
Sbjct: 1   MQVRDLMSSSVVSIAPGESAALAARLLARHNIGSLPVCGTDGRLRGIVTDRDIV 54


>gi|57866143|ref|YP_187813.1| SIS domain-containing protein [Staphylococcus epidermidis RP62A]
 gi|57636801|gb|AAW53589.1| SIS domain protein [Staphylococcus epidermidis RP62A]
          Length = 182

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+++L    + ++      +     R+   G G+SG + +  A  L   G  ++ V 
Sbjct: 11  LEELDATLSQVDNTEYERFANDVIGAD-RIFTAGKGRSGFVSNSFAMRLNQLGKNAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+   S +   A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSVGAKIVLLTTNADSPIGNLAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 125 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSIVLPLMDAFHISEKAMQENH 178


>gi|46200940|ref|ZP_00056065.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 113

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 4/107 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
               L +A ++L EK  G +   D    + GI++E DI R+F +   D+ ++SV D M +
Sbjct: 3   PSASLREAASLLLEKNIGALICSDRAGGIVGILSERDISRSFARLGADIISMSVSDAMTR 62

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      D  +   ++++ +     + VV    + +G+V   DL++ 
Sbjct: 63  DVIACSADDGVAEILEIMTETRCRHIPVV-GDGELLGLVSIGDLVKA 108


>gi|325182347|emb|CCA16800.1| myosinlike protein putative [Albugo laibachii Nc14]
          Length = 2641

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 222  DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL 280
             ++H    + L  +   + +A  ++ + R   +AV     +++GI+T+ DI  R   +DL
Sbjct: 2141 SMLHPRKVMCL-HVTSTVAEAAKLMRQARAEAIAVTSRDGEIQGILTDTDIARRVIARDL 2199

Query: 281  --NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              N   +E VM   P  +  +     A+  + +     L V+    K  G++  
Sbjct: 2200 DPNKCLIESVMTSRPCCVHVNDSAIEAITRMLEGQFKHLPVIGQDGKISGMLDI 2253



 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 4/84 (4%)

Query: 254  VAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              +V E + L G++TE D+        +DL    V ++M K P  +   +  T A+ L+ 
Sbjct: 1468 CVIVCEKEDLCGVVTETDVANRMVGERRDLQIALVSEIMTKKPIWVSSQSSATDALNLML 1527

Query: 311  QHNISVLMVVDD-CQKAIGIVHFL 333
            +H +  L V D   ++  G++HF 
Sbjct: 1528 EHRVHHLPVKDSITKQITGVLHFQ 1551



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 40/96 (41%), Gaps = 3/96 (3%)

Query: 244  TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
             ILS++R     V+ E   L+GI+T+ DI         D N   V ++M   P+ +    
Sbjct: 1789 AILSQRRSDSALVISEDGVLQGIVTDTDIAYRVVGVGNDPNRTIVSEIMTPKPEFVFAKD 1848

Query: 301  LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                AM  + Q     L V++D     GI+     L
Sbjct: 1849 RALDAMFAMLQGRFRHLPVINDRGVVDGILRIQKCL 1884



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 12/119 (10%)

Query: 223  VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDIF-RNFH 277
            +      + +V     +  A+  +   + G   VVD    E  K+ G++T  D+  R   
Sbjct: 1935 LERQKHEVLIVSKHDTISVAVGQMMRVK-GAALVVDRSQVEEPKIVGLLTPNDLLLRVIA 1993

Query: 278  K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQKA-IGIV 330
               D NT  V  VM  +P ++    LL  A +L+ + N+S L VV   DD +K  +G++
Sbjct: 1994 NKLDANTSKVSQVMSMDPTIVSSSMLLLDAFRLMYRENLSYLPVVRESDDSKKVIVGVL 2052



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 226  SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--T 282
            +     LV+    +    + + + R     V+D   +L GI T  D+  R   K  N   
Sbjct: 966  AQKRPLLVERNENVASVTSKMRKYRQ-IALVMDADSQLCGIFTTKDLIHRVLAKRRNPQL 1024

Query: 283  LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +SV +VM  +P+ +        A++++ +     L ++ + Q  IGIV  L ++  
Sbjct: 1025 ISVMEVMTPHPERVSPLQNAFDALRMMHEERFLHLPMIQNDQ-IIGIVDVLAIIGA 1079



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 48/117 (41%), Gaps = 12/117 (10%)

Query: 224  MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDL 280
             H  + + LV     + D    ++    G   ++D      GI T   +    R     L
Sbjct: 1602 QHKNEVVALVGPQVCVADVCKRMATS--GAALIIDPNGTCLGICTPKLLLQYVRTLGHSL 1659

Query: 281  NTLSVEDVMIKNPK---VILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHF 332
             T ++ DVM   P     +  D  +  AM+L+R  N+S L VV   +  + +G+V F
Sbjct: 1660 KTTAIADVM--EPIHSASLQPDATVLDAMKLMRDRNVSALPVVQSTEIARPLGVVTF 1714



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 216  LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +    + + +    P++     ++ A  ++ E +     +VD   ++ G++T  DI R 
Sbjct: 2295 KYPTVLEALENESKPPIIPCTMSVLKASKLMVEHK-KAAIIVDSEDRIVGMLTPKDILRK 2353

Query: 276  F-HKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIV 330
               K L   + SV  VM K+P  IL    +  +++ +       + V+    K  IG+V
Sbjct: 2354 LVAKGLKAKSTSVHMVMTKDPDFILPSATILDSLRRMYDAGQLFMPVLGSGTKDVIGMV 2412



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/116 (15%), Positives = 45/116 (38%), Gaps = 9/116 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNF--HKDLNT 282
              +   +     + +A  +++  R   V V+D   ++  G+IT+ D+      H+   T
Sbjct: 808 CLPTPVTISSNSSISEACELMTRMRCEAVLVLDSSSKRFCGMITDEDVADRLIAHEWEAT 867

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLD 334
             +  ++   P V+     +     L+++  +  + V+    +  G+V       D
Sbjct: 868 TPLAKIVEMCP-VVHTHQDVVEVFDLMQKEGVHHVPVL-QNNQVHGVVTVSHYLHD 921



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 42/189 (22%)

Query: 188  ALAIALLESRN-----FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
            A AIA+           ++ D         L         VM S      V +    I+A
Sbjct: 2169 AEAIAVTSRDGEIQGILTDTDIARRVIARDLDPNKCLIESVMTSRPCC--VHVNDSAIEA 2226

Query: 243  ITILSEKRFGCVAVVDEGQKLKGII---------------------------TEGDIFRN 275
            IT + E +F  + V+ +  K+ G++                           T   I R 
Sbjct: 2227 ITRMLEGQFKHLPVIGQDGKISGMLDISKCLVDAVECMEKVHQANLKHDSSSTTSLISRV 2286

Query: 276  F---HKDLNTLSVEDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            F   H  +   +V + +    K P  I     +  A +L+ +H     ++VD   + +G+
Sbjct: 2287 FSSSHSKIKYPTVLEALENESKPPI-IPCTMSVLKASKLMVEHK-KAAIIVDSEDRIVGM 2344

Query: 330  VHFLDLLRF 338
            +   D+LR 
Sbjct: 2345 LTPKDILRK 2353



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 7/49 (14%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVH 331
           ++  + +  P  I  ++ ++ A +L+ +     ++V+D   ++  G++ 
Sbjct: 803 TIAQLCLPTPVTISSNSSISEACELMTRMRCEAVLVLDSSSKRFCGMIT 851


>gi|320538309|ref|ZP_08038190.1| CBS domain pair [Treponema phagedenis F0421]
 gi|320144808|gb|EFW36543.1| CBS domain pair [Treponema phagedenis F0421]
          Length = 214

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     + DA+  L ++  G V V+D+   L GIITE D+                +  L
Sbjct: 16  IHPEMSVPDALAFLKKEGIGRVPVLDQRNHLIGIITERDLLNASPSSATALDIYEINYLL 75

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VE VM ++   I ED  +  A +++  + +S L V+      +GIV   DL + 
Sbjct: 76  SKLKVEKVMKRDVITITEDVAVEEAARIMVDNKVSALPVM-RGDALVGIVSDGDLFKL 132



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V  +M   P  I  +  +  A+  L++  I  + V+D     IGI+   DLL  
Sbjct: 2   RMDVASIMTNTPLYIHPEMSVPDALAFLKKEGIGRVPVLDQRNHLIGIITERDLLNA 58


>gi|309798594|ref|ZP_07692869.1| CBS domain protein [Streptococcus infantis SK1302]
 gi|308117830|gb|EFO55231.1| CBS domain protein [Streptococcus infantis SK1302]
          Length = 218

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIFEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI+N   +     L  A  L+ ++ I +L V+D+ Q   G++   D+ R 
Sbjct: 73  NKTKVKDVMIRNVVTVSGYASLEDATYLMLKNKIGILPVIDNEQ-VYGVITDRDVFRA 129



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVT 48



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              ++  V     L DA  ++ + + G + V+D  +++ G+IT+ D+FR F
Sbjct: 81  MIRNVVTVSGYASLEDATYLMLKNKIGILPVID-NEQVYGVITDRDVFRAF 130


>gi|291566618|dbj|BAI88890.1| putative voltage-gated chloride channel [Arthrospira platensis
           NIES-39]
          Length = 890

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVI 296
            L    +  S+       VV+   KL GII++ D+ R   +D++    +  +M   P  I
Sbjct: 474 SLEQVRSAFSQSHHRGFPVVN-QGKLVGIISQTDMARINQQDISEQTPLHKLMTPQPVTI 532

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D  L+  + LL +  +S L VV + +  +GI+   D++R
Sbjct: 533 YPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +    PL + + +L  ++   + VV EG+ L GIIT  DI R
Sbjct: 525 MTPQPVTIYPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572


>gi|153010445|ref|YP_001371659.1| RpiR family transcriptional regulator [Ochrobactrum anthropi ATCC
           49188]
 gi|151562333|gb|ABS15830.1| transcriptional regulator, RpiR family [Ochrobactrum anthropi ATCC
           49188]
          Length = 282

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 72/167 (43%), Gaps = 4/167 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S++ ++          A++ + + + R+ + G+G S  +    +  L   G       
Sbjct: 107 LQSMQQTISANNEQGIDGALQALISAR-RIHLAGVGASSLVARDFSYKLMKLGRNVMHDS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     ++  +   D++  LS+SG+S E   I   A+++   +IA+T  N++ +   AD
Sbjct: 166 DSHIQMANVSTLHEGDVLFALSYSGTSIETLRIAEQAKKWGATVIAVTGLNENPLNKIAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           I L      +      +  T+   QL + D L I L + R    ND+
Sbjct: 226 IRLYT--VADEERVRSSSITARDAQLVLTDLLFILLFQ-RQQDANDY 269


>gi|149181127|ref|ZP_01859627.1| hypothetical protein BSG1_10348 [Bacillus sp. SG-1]
 gi|148851214|gb|EDL65364.1| hypothetical protein BSG1_10348 [Bacillus sp. SG-1]
          Length = 439

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 8/104 (7%)

Query: 239 LIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
           + D +    EK          V+D  +K++G++T  D+          + ++ VM K P 
Sbjct: 206 VGDTLEDWYEKNQSTFHSRFPVIDRNRKVQGMVTSKDVM----GQEKDVMIDKVMTKKPI 261

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +T +  A  ++    I VL VVDD  +  GI+   D+L+ 
Sbjct: 262 TVRPNTSVASAAHMMIWEGIEVLPVVDDLNRIQGIISRQDVLKA 305



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/78 (12%), Positives = 25/78 (32%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +                   V+    +  A  ++  +    + VVD+  +++GII+ 
Sbjct: 240 SKDVMGQEKDVMIDKVMTKKPITVRPNTSVASAAHMMIWEGIEVLPVVDDLNRIQGIISR 299

Query: 270 GDIFRNFHKDLNTLSVED 287
            D+ +          V +
Sbjct: 300 QDVLKAMQMIQRQPQVGE 317


>gi|229525411|ref|ZP_04414816.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae bv.
           albensis VL426]
 gi|254225030|ref|ZP_04918644.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae V51]
 gi|254285485|ref|ZP_04960449.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae AM-19226]
 gi|125622417|gb|EAZ50737.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae V51]
 gi|150424347|gb|EDN16284.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae AM-19226]
 gi|229338992|gb|EEO04009.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae bv.
           albensis VL426]
          Length = 489

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 43  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 100 VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 156

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 157 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 206


>gi|18405453|ref|NP_564698.1| CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride
           channel [Arabidopsis thaliana]
 gi|41688504|sp|Q8RXR2|CLCF_ARATH RecName: Full=Chloride channel protein CLC-f; Short=AtCLC-f
 gi|14039802|gb|AAK53391.1|AF366368_1 CLC-f chloride channel protein [Arabidopsis thaliana]
 gi|13619402|emb|CAC36386.1| hypothetical protein [Arabidopsis thaliana]
 gi|332195154|gb|AEE33275.1| chloride channel protein CLC-f [Arabidopsis thaliana]
          Length = 781

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 23/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL E    C+ VVD+   L GI+T GDI 
Sbjct: 609 ETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIR 668

Query: 274 RNFHK------DLNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLM 318
           R          D NT  V  V  K                D  + VA +L+    +  L 
Sbjct: 669 RYLSNNASTILDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLP 728

Query: 319 VVD--------DCQKAIGIVHF 332
           VV           +K +G++H+
Sbjct: 729 VVKRGEVIHKGKRRKLLGLLHY 750



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +   T L  A  +L++ + + +MVVDD     GI+   D+ R+
Sbjct: 612 LEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRY 670


>gi|119510301|ref|ZP_01629437.1| hypothetical protein N9414_16127 [Nodularia spumigena CCY9414]
 gi|119465045|gb|EAW45946.1| hypothetical protein N9414_16127 [Nodularia spumigena CCY9414]
          Length = 887

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 11/113 (9%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------LNTLSV 285
               L +A+ + S        VV E  KL GIIT+ D       D            +S+
Sbjct: 459 ADMTLEEAMQVFSRSHHRGFPVV-ENGKLIGIITQSDFVTKRDSDSYILSNSQSPKDVSL 517

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++MI +P  +     L+  + LL ++ IS L VV + +K +GI+   D++R 
Sbjct: 518 REIMIHSPITVKPKHHLSNVLYLLDRYQISRLPVV-EGRKLVGIITRADIIRA 569



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 8/119 (6%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              V        LV     +  A  ++S+K     ++ D+  +LKGI     I +    +
Sbjct: 384 IVIVFEMTTDFNLVLPLMIVSVAAYLVSDKVM-PGSLYDKLLQLKGIT----ITKAVSPE 438

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L  L+  DVM    + +  D  L  AMQ+  + +     VV +  K IGI+   D +
Sbjct: 439 GILTKLTANDVMQHRVETLDADMTLEEAMQVFSRSHHRGFPVV-ENGKLIGIITQSDFV 496



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S       S   VK    L + + +L   +   + VV EG+KL GIIT  DI R   + 
Sbjct: 515 VSLREIMIHSPITVKPKHHLSNVLYLLDRYQISRLPVV-EGRKLVGIITRADIIRAQAEH 573

Query: 280 LN 281
           LN
Sbjct: 574 LN 575


>gi|296876046|ref|ZP_06900102.1| AcuB family protein [Streptococcus parasanguinis ATCC 15912]
 gi|296432957|gb|EFH18748.1| AcuB family protein [Streptococcus parasanguinis ATCC 15912]
          Length = 253

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 60/144 (41%), Gaps = 16/144 (11%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                 +G L +   D M     +  +     +  A  ++ E+    + V+ E  KL G+
Sbjct: 25  NKTNKSIGELVMAVKDFM--TRKVVYISPDTTIAHAADLMREQGLHRLPVI-ENDKLVGL 81

Query: 267 ITEGDIFRN------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           +TEG I                +  LN   V+DVM+++   + +   L  A  L+ ++ +
Sbjct: 82  VTEGTIAEASPSKATSLSIFEMNYLLNKTKVKDVMLRDVITVSKFASLEDATYLMYKNKV 141

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
            +L VVD+ Q   G++   D+ R 
Sbjct: 142 GILPVVDNEQ-VSGVITDRDIFRA 164



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DA  ++ + + G + VVD  +++ G+IT+ DIFR F
Sbjct: 123 VSKFASLEDATYLMYKNKVGILPVVD-NEQVSGVITDRDIFRAF 165


>gi|254930931|ref|ZP_05264290.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes HPB2262]
 gi|293582478|gb|EFF94510.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes HPB2262]
 gi|332313225|gb|EGJ26320.1| Phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes str. Scott A]
          Length = 268

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ +N
Sbjct: 224 SKRYFANSQFSIMYVMDIISMMLLQNESYRDN 255


>gi|301060430|ref|ZP_07201289.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300445484|gb|EFK09390.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 227

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 52/122 (42%), Gaps = 19/122 (15%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------------F 276
               +I A  ++ + +     V+    +L GI+T+ DI                      
Sbjct: 16  EDTSIIKAAELMKKNKICRFPVL-RNGELVGIVTDRDIRSAAPSQVVSFDQQERKLLPEL 74

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L  ++V+ +M ++   I  +  +  A  L+ +++IS + VVD  +K +GI+   D+ 
Sbjct: 75  YDYLAQINVKVMMSRDVITIEPEQSIMAAAALMLRYHISGMPVVDSMEKIVGIITESDIF 134

Query: 337 RF 338
           + 
Sbjct: 135 KA 136



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V + M  N     EDT +  A +L++++ I    V+    + +GIV   D+
Sbjct: 3   VREYMSANVISADEDTSIIKAAELMKKNKICRFPVL-RNGELVGIVTDRDI 52



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +  +     +  ++    ++ A  ++       + VVD  +K+ GIITE DIF+  
Sbjct: 81  INVKVMMSRDVITIEPEQSIMAAAALMLRYHISGMPVVDSMEKIVGIITESDIFKAL 137


>gi|28869810|ref|NP_792429.1| CBS domain-containing protein [Pseudomonas syringae pv. tomato str.
           DC3000]
 gi|213969942|ref|ZP_03398075.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|301382215|ref|ZP_07230633.1| CBS domain protein [Pseudomonas syringae pv. tomato Max13]
 gi|302061328|ref|ZP_07252869.1| CBS domain protein [Pseudomonas syringae pv. tomato K40]
 gi|302134267|ref|ZP_07260257.1| CBS domain protein [Pseudomonas syringae pv. tomato NCPPB 1108]
 gi|28853055|gb|AAO56124.1| CBS domain protein [Pseudomonas syringae pv. tomato str. DC3000]
 gi|213925267|gb|EEB58829.1| CBS domain protein [Pseudomonas syringae pv. tomato T1]
 gi|331014472|gb|EGH94528.1| CBS domain protein [Pseudomonas syringae pv. lachrymans str.
           M302278PT]
          Length = 146

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     ++DA+ ++++K  G + VV E   + G+++E D  R      +    
Sbjct: 14  HNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVLKGRSSVG 72

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M      +     +   M ++   ++  L VV +  + +G++   DL++  I
Sbjct: 73  TPVSEIMSSKVITVDSQQTVETCMGIMTDSHLRHLPVV-EDGQLLGLLSIGDLVKEAI 129



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           L ++D+  ++   I  + ++  A++L+   NI  L VV +    +G+V   D  R  ++
Sbjct: 8   LKLKDLHNQHVHTIGPNQMVLDALRLMADKNIGALPVV-ENGTVVGVVSERDYARKVVL 65


>gi|319652231|ref|ZP_08006349.1| hypothetical protein HMPREF1013_02962 [Bacillus sp. 2_A_57_CT2]
 gi|317396054|gb|EFV76774.1| hypothetical protein HMPREF1013_02962 [Bacillus sp. 2_A_57_CT2]
          Length = 241

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 11/174 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F+ FK   +      K ++++ + +SI      +   E +L+G+L  +   A E I    
Sbjct: 59  FTEFKIKFKLYLQENKKTSIKGSKQSI------VEFFERTLRGDLDEKIIEAAELINTAD 112

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGS 123
             ++  GIG SG +    A   +S G  S ++       H     I    + I LS SG 
Sbjct: 113 N-IIFIGIGSSGILAEYGARYFSSLGKFSLYIKDPHFPIHSS---IRSSSVTIALSVSGE 168

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +      L   ++    +I+IT+   S +A  +D+ +      E+       T 
Sbjct: 169 TPFTVTHLNQLKQEGSKIISITNSRLSTIAKVSDLNIAYYVTEETFEQSNITTQ 222


>gi|229095370|ref|ZP_04226361.1| CBS domain protein [Bacillus cereus Rock3-29]
 gi|229114321|ref|ZP_04243739.1| CBS domain protein [Bacillus cereus Rock1-3]
 gi|228669000|gb|EEL24424.1| CBS domain protein [Bacillus cereus Rock1-3]
 gi|228687916|gb|EEL41803.1| CBS domain protein [Bacillus cereus Rock3-29]
          Length = 139

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + V+ E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVL-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-EGGQLVGMLALGDL 117



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ ++ ++ V+++ Q  +G+V   DL+  GI
Sbjct: 2   TQVRDFMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVLENEQ-VVGLVTDRDLVVRGI 58


>gi|221632888|ref|YP_002522110.1| CBS domain-containing protein/ACT domain-containing protein
           [Thermomicrobium roseum DSM 5159]
 gi|221156067|gb|ACM05194.1| CBS domain protein/ACT domain protein [Thermomicrobium roseum DSM
           5159]
          Length = 162

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 50/120 (41%), Gaps = 6/120 (5%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                    +++  V+    + +   +L   R   V V+DE  ++ GI++E D+      
Sbjct: 8   TVLAREIMTENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVSEFDLL----- 62

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  ++M ++   + E+T       L+ Q  +  + V+    + +GIV   DL+R 
Sbjct: 63  AKRGHTAGEIMTRDVIAVTEETPAEAIADLIVQQRVRRVPVL-KEGRLVGIVTRADLIRL 121



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++T+   ++M +N   +  +T +    +LL  H I+ + V+D+  + +GIV   DLL
Sbjct: 6   VDTVLAREIMTENVVTVRPNTTVEEVARLLMTHRITGVPVIDEAGRVLGIVSEFDLL 62


>gi|91773708|ref|YP_566400.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712723|gb|ABE52650.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 279

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 59/112 (52%), Gaps = 10/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------KDLNTLSV 285
           +   P+  A  ++   +   + VV EG K+ GI+T+ D+ R           + ++ + V
Sbjct: 15  EPEEPVSHARKLMLRHKISTIVVV-EGNKMVGIVTKSDLGRRLAQAEPMWRRRPIDKVPV 73

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +M ++P  I +D  ++ A  L+  ++I+ + VV +  + +GIV  +D++R
Sbjct: 74  KMIMTEDPVTIYKDASVSQATALMVDNDINNIPVV-NNGELVGIVTRVDVVR 124



 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 48/122 (39%), Gaps = 1/122 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     M   +    +     +  A  ++ +     + VV+   +L GI+T  D+ 
Sbjct: 65  RRPIDKVPVKMIMTEDPVTIYKDASVSQATALMVDNDINNIPVVN-NGELVGIVTRVDVV 123

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   +     ++ ++M  +P  +     L   +  +  + +S L+V DD  +A+G +   
Sbjct: 124 RCMSELPVKKNLGEIMTADPIFVHRHHTLNHVVDEMEINKVSKLIVTDDSGEAVGFITTR 183

Query: 334 DL 335
           +L
Sbjct: 184 EL 185



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/141 (16%), Positives = 45/141 (31%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
                  V     L   +  +   +   + V D+  +  G IT  ++  +   D      
Sbjct: 139 MTADPIFVHRHHTLNHVVDEMEINKVSKLIVTDDSGEAVGFITTRELALHVLTDNEGQLP 198

Query: 283 -------------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                    L  EDVM     V+     +T A +++   NI+ +
Sbjct: 199 SKNIKMARRAEPSGEKIYRYIKTVPLVAEDVMSDIFAVLDVGDDITKAAKIMVDKNITGI 258

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            +  +  + +GIV   D++R 
Sbjct: 259 PIA-ENNEIVGIVSRTDIMRA 278



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D+M     V+  +  ++ A +L+ +H IS ++VV +  K +GIV   DL R
Sbjct: 3   VSDIMSSPVYVMEPEEPVSHARKLMLRHKISTIVVV-EGNKMVGIVTKSDLGR 54


>gi|260773379|ref|ZP_05882295.1| inosine-5'-monophosphate dehydrogenase [Vibrio metschnikovii CIP
           69.14]
 gi|260612518|gb|EEX37721.1| inosine-5'-monophosphate dehydrogenase [Vibrio metschnikovii CIP
           69.14]
          Length = 439

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 56/164 (34%), Gaps = 14/164 (8%)

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIG 236
           M       LAIAL +           +H    +         V             V+  
Sbjct: 1   MDTVTEARLAIALAQEGGLG-----FIHKNMSIEQQAEQVHQVKIFEAGVVTHPVTVRPQ 55

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPK 294
             + D + +  +  F    VV E  +L GIIT  D+   F  DL  L V DVM       
Sbjct: 56  ATIADVMALTEKHGFAGFPVVSENNELVGIITGRDVR--FVTDLTKL-VSDVMTPKDRLA 112

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 113 TVKEGASGQEVQERMHKARVEKILVVNDEFQLKGMITAKDFHKA 156


>gi|162147301|ref|YP_001601762.1| hypothetical protein GDI_1506 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161785878|emb|CAP55449.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 235

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 24/136 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG--------------- 270
                  V+    L DAI ++   R   + VV E   L G++TE                
Sbjct: 7   MTSPAVCVESTRSLADAIGLMLTNRVNALPVVTENGLLVGVVTERPDPRNELETRSGHGR 66

Query: 271 --DIFRNFHKDLNT------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
             D+FR+  +  +         V D+M   P  +   T+L  A+++L   NI  L VV +
Sbjct: 67  LADLFRSSGRQASEYVHSHGRKVFDIMSDQPVSVEPGTVLRDAVEVLLLRNIRHLPVV-E 125

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G+V   D+LR 
Sbjct: 126 NNRVVGMVSRTDVLRA 141



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V D+M      +     L  A+ L+  + ++ L VV +    +G+V 
Sbjct: 3   VRDIMTSPAVCVESTRSLADAIGLMLTNRVNALPVVTENGLLVGVVT 49


>gi|27377873|ref|NP_769402.1| hypothetical protein blr2762 [Bradyrhizobium japonicum USDA 110]
 gi|152198|gb|AAA26202.1| putative [Bradyrhizobium japonicum]
 gi|3021313|emb|CAA06278.1| hypothetical protein [Bradyrhizobium japonicum]
 gi|27351019|dbj|BAC48027.1| blr2762 [Bradyrhizobium japonicum USDA 110]
          Length = 141

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 11/126 (8%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----- 277
             +   ++  V+    +++   +     F    V D+  ++ GI+T+ DI + F      
Sbjct: 10  DGYMTRNVKTVQRDIDMLELSEMFERDDFNSYPVEDD-GQVVGIVTKFDILKCFAFTPSQ 68

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 DL +  + DVM      +  DT LT  +Q++ +H I  ++V+D  QK +GI+  
Sbjct: 69  MLPRYHDLMSRKIGDVMTPEFIYVSPDTRLTRVLQIMVEHRIRSIIVLDGAQKLVGIIAR 128

Query: 333 LDLLRF 338
            D++  
Sbjct: 129 EDVIAA 134



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +V+  M +N K +  D  +    ++  + + +   V +D  + +GIV   D+L+
Sbjct: 4   FLEQTVDGYMTRNVKTVQRDIDMLELSEMFERDDFNSYPV-EDDGQVVGIVTKFDILK 60



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 19/57 (33%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
                  V     L   + I+ E R   + V+D  QKL GII   D+          
Sbjct: 85  MTPEFIYVSPDTRLTRVLQIMVEHRIRSIIVLDGAQKLVGIIAREDVIAALKATARD 141


>gi|116626523|ref|YP_828679.1| signal-transduction protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116229685|gb|ABJ88394.1| putative signal-transduction protein with CBS domains [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 141

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 6/123 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                DV+H       V+    +     +++  + G + V+ +G  L GI +E D+    
Sbjct: 1   MSRVRDVVHQCQLFS-VEEHQSVAQVARVMAGFKVGAILVL-KGDDLAGIFSERDLMTRI 58

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +D +   V DVM  +   I E      AM+ ++ +N   L V     + +  +   
Sbjct: 59  VLERRDPDLTPVRDVMTTDVCTIDESATPEEAMEAMQANNCRHLPVT-RDGRVVAFLSMR 117

Query: 334 DLL 336
           DL+
Sbjct: 118 DLM 120


>gi|330898820|gb|EGH30239.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. japonica str. M301072PT]
          Length = 644

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGIFTLRDLREA 232


>gi|328957952|ref|YP_004375338.1| component of the acetoin degradation regulation pathway
           [Carnobacterium sp. 17-4]
 gi|328674276|gb|AEB30322.1| component of the acetoin degradation regulation pathway
           [Carnobacterium sp. 17-4]
          Length = 219

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 54/126 (42%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +   ++  V     +++A+ I+ E  F  + VV +  ++ G++T+  I  N         
Sbjct: 6   YMTSTVVTVSEETKVLEALDIMKENDFHRLPVV-KDGRMIGLVTQEIIQENSPSTATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L    V D+M K    I  D LL  A   +R   I VL VV++  + +GI+  
Sbjct: 65  IHEMNYLLTKTKVGDIMQKKVLTIHADDLLEEAAARMRDQEIGVLPVVEEGNEIVGIITD 124

Query: 333 LDLLRF 338
            D+   
Sbjct: 125 KDIFSA 130



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+  M      + E+T +  A+ ++++++   L VV    + IG+V 
Sbjct: 1   MDVKSYMTSTVVTVSEETKVLEALDIMKENDFHRLPVV-KDGRMIGLVT 48



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 25/44 (56%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     L +A   + ++  G + VV+EG ++ GIIT+ DIF  F
Sbjct: 88  IHADDLLEEAAARMRDQEIGVLPVVEEGNEIVGIITDKDIFSAF 131


>gi|229101483|ref|ZP_04232221.1| CBS domain protein [Bacillus cereus Rock3-28]
 gi|228681933|gb|EEL36072.1| CBS domain protein [Bacillus cereus Rock3-28]
          Length = 139

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + V+ E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVL-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-EGGQLVGMLALGDL 117



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V D M  +         +  A   +++ ++ ++ V+++ Q  +G+V   DL+  GI
Sbjct: 2   TQVRDFMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVLENEQ-VVGLVTDRDLVVRGI 58


>gi|171463293|ref|YP_001797406.1| inosine-5'-monophosphate dehydrogenase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
 gi|171192831|gb|ACB43792.1| inosine-5'-monophosphate dehydrogenase [Polynucleobacter
           necessarius subsp. necessarius STIR1]
          Length = 487

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 63/168 (37%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+             L P  +   +                
Sbjct: 40  NTPLVSAAMDTVTEGRLAIAMASEGGIGIIH-KNLKPADQAREVAKVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L   I +  E  F    V+  G++++GIIT  D+   F +DL    V+  M   
Sbjct: 99  ISPDVTLRQVIQLSREHGFSGFPVLV-GKEVEGIITNRDLR--FEEDL-DAPVKSRMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ QH +  ++VV+D  +  G++   D+L+ 
Sbjct: 155 ERLITVKEGCSLDEAKRLMSQHRLERVLVVNDKFELRGLITVKDILKA 202


>gi|86159717|ref|YP_466502.1| signal-transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85776228|gb|ABC83065.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 141

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
            +    + D   ++ ++  G V V ++  +  G IT+ D+  R   +  +    V   M 
Sbjct: 13  CRERDSVRDCAALMRDEEIGFVPVCNDAGEPVGAITDRDLAIRVLAEGRSADEQVSSCMT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +          L  A QL+RQ  +S +MV DD  +  G++   D+
Sbjct: 73  REVVACRLGDDLRDAEQLMRQRQLSRVMVCDDDGRLRGVISLADI 117


>gi|46908982|ref|YP_015371.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47092682|ref|ZP_00230469.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 4b H7858]
 gi|226225345|ref|YP_002759452.1| RpiR transcription regulator [Listeria monocytogenes Clip81459]
 gi|254824839|ref|ZP_05229840.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J1-194]
 gi|254851901|ref|ZP_05241249.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL R2-503]
 gi|254994085|ref|ZP_05276275.1| RpiR transcription regulator [Listeria monocytogenes FSL J2-064]
 gi|255520535|ref|ZP_05387772.1| RpiR transcription regulator [Listeria monocytogenes FSL J1-175]
 gi|300763447|ref|ZP_07073445.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes FSL N1-017]
 gi|46882255|gb|AAT05548.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018977|gb|EAL09723.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 4b H7858]
 gi|225877807|emb|CAS06522.1| Putative RpiR transcription regulator [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605197|gb|EEW17805.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL R2-503]
 gi|293594081|gb|EFG01842.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J1-194]
 gi|300515724|gb|EFK42773.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes FSL N1-017]
 gi|328468269|gb|EGF39275.1| RpiR transcription regulator [Listeria monocytogenes 1816]
          Length = 268

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ +N
Sbjct: 224 SKRYFANSQFSIMYVMDIISMMLLQNESYRDN 255


>gi|294506450|ref|YP_003570508.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
 gi|294342778|emb|CBH23556.1| Inosine-5'-monophosphate dehydrogenase [Salinibacter ruber M8]
          Length = 207

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 53/128 (41%), Gaps = 14/128 (10%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------ 276
                  +  V     LID    L E  F  + VV E   L G+I++ D+ +        
Sbjct: 76  DRIMSRDVVTVAPDAALIDIRKRLQEGGFNHMLVV-EDGALCGVISDRDVLKAISPFLDT 134

Query: 277 ----HKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               H+D+ TL     ++M  +P  +   T +  A Q L  + +S L VV +    IGIV
Sbjct: 135 YSEKHRDVKTLSRPASEIMQGDPITVAPGTPVEEASQTLLDNRVSSLPVV-EGGDLIGIV 193

Query: 331 HFLDLLRF 338
              D+L +
Sbjct: 194 TGKDMLEY 201



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            T++++ +M ++   +  D  L    + L++   + ++VV +     G++   D+L+ 
Sbjct: 71  FTMTIDRIMSRDVVTVAPDAALIDIRKRLQEGGFNHMLVV-EDGALCGVISDRDVLKA 127


>gi|282875273|ref|ZP_06284146.1| SIS domain protein [Staphylococcus epidermidis SK135]
 gi|281296038|gb|EFA88559.1| SIS domain protein [Staphylococcus epidermidis SK135]
 gi|329733903|gb|EGG70227.1| SIS domain protein [Staphylococcus epidermidis VCU028]
          Length = 290

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +   +       + IK  +  + 
Sbjct: 77  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETLNAAIIDEICDLIKNSET-IF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 134 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 194 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 252

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 253 LYYRYIALNYQSSLDF 268


>gi|37677326|ref|NP_937722.1| transcriptional regulator [Vibrio vulnificus YJ016]
 gi|37201872|dbj|BAC97692.1| transcriptional regulator [Vibrio vulnificus YJ016]
          Length = 282

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 6/179 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + I A+   +    ++L  E     H AV+ +   + RV I GIG S      L+  
Sbjct: 98  IAQKLIKAKTDAMFQTTNALSYE---ACHQAVQWLSEAR-RVQIVGIGGSALTAKDLSYK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         ++  D+ I +S+SG   E+      A+     +IA++
Sbjct: 154 LLKLGITTLVEQDSHVQIAVARTLSEQDVQIAISFSGERKEILVAAEAAKEQGAKVIALS 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           S  KS +   AD+        +   H  +   S   Q  I D L I L++ R+ S    
Sbjct: 214 SPKKSRLRQIADMTFDT--IADETEHRSSAIASRSAQNVITDLLFIILVQLRDESARQM 270


>gi|283851978|ref|ZP_06369254.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
 gi|283572702|gb|EFC20686.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
          Length = 408

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 51/140 (36%), Gaps = 20/140 (14%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V    PL   + +L  +    V V+ E  K+ G++T GD+     
Sbjct: 108 CPVRVRDVMAVDVASVSPTDPLPKVVDLLLARGVKAVPVIGENGKVAGVVTGGDLLARGG 167

Query: 278 KD--------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            D                    +  L+  DVM      I E   L  A Q++ +  +  L
Sbjct: 168 MDTRLSLQNILPDDVRAGERARMAGLTARDVMTSPAVTIGERAGLREAAQVMSRKGLKRL 227

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            VVD+  + IGIV   D+LR
Sbjct: 228 PVVDEAGELIGIVSRADILR 247



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/121 (26%), Positives = 49/121 (40%), Gaps = 18/121 (14%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------FRNFHKDLNTL--- 283
              PL + +  L       V V+D  +K++GI+ +GD+             K L +    
Sbjct: 283 PDTPLPEVVARLVASPLRRVVVIDADRKVRGIVLDGDLLGRCGPERKPGLLKALFSFGRE 342

Query: 284 -------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                     +VM  N   + EDT L   +Q +       L+VVDD  K +G+V    LL
Sbjct: 343 EAACPMGRASEVMQANVYTVSEDTPLMDVLQRMLTTRAKRLVVVDDEGKLLGMVDRESLL 402

Query: 337 R 337
           R
Sbjct: 403 R 403



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 47/124 (37%), Gaps = 14/124 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  +     L +A  ++S K    + VVDE  +L GI++  DI R           
Sbjct: 199 MTSPAVTIGERAGLREAAQVMSRKGLKRLPVVDEAGELIGIVSRADILRSASDLAPAAEA 258

Query: 275 --NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              F   L      DVM  +      DT L   +  L    +  ++V+D  +K  GIV  
Sbjct: 259 LPRFTAGLFQ-QARDVMFTDVPTAAPDTPLPEVVARLVASPLRRVVVIDADRKVRGIVLD 317

Query: 333 LDLL 336
            DLL
Sbjct: 318 GDLL 321



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 20/75 (26%), Positives = 32/75 (42%), Gaps = 3/75 (4%)

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT   +  +FH  +    V DVM  +   +     L   + LL    +  + V+ +  
Sbjct: 95  GLITRQRLSAHFHCPVR---VRDVMAVDVASVSPTDPLPKVVDLLLARGVKAVPVIGENG 151

Query: 325 KAIGIVHFLDLLRFG 339
           K  G+V   DLL  G
Sbjct: 152 KVAGVVTGGDLLARG 166



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              ++  V    PL+D +  +   R   + VVD+  KL G++    + R     
Sbjct: 355 MQANVYTVSEDTPLMDVLQRMLTTRAKRLVVVDDEGKLLGMVDRESLLRVIAGG 408


>gi|169632089|ref|YP_001705825.1| putative polysaccharide biosynthesis protein [Acinetobacter
           baumannii SDF]
 gi|169150881|emb|CAO99485.1| conserved hypothetical protein; putative polysaccharide
           biosynthesis protein [Acinetobacter baumannii]
          Length = 353

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 3/118 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M    +  ++     ++ A+ +L       V VVD+   L G IT+GDI R   K  +  
Sbjct: 1   MIRDVNKIILHKKDSILKALELLDLYALRIVLVVDDHNHLIGSITDGDIRRGLLKGQDVH 60

Query: 283 LSVEDVMIKNPKVILEDTLLT-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            SVE +M   P  I E +L      +++R+ +   L V+    + + I+   DL+R  
Sbjct: 61  ASVETIMHTTPYSIEEGSLNNRQIFEIMREKSYLALPVI-KNNQLVNIITLDDLIRKK 117


>gi|311029213|ref|ZP_07707303.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus sp. m3-13]
          Length = 185

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  L  S     + +    V  I   K ++ + G G+SG +    A  +   G  ++ + 
Sbjct: 11  IKELIRSGDLISNDEAEKLVNGILESK-KIFVAGAGRSGFMAKSFAMRMMHMGIDAYVIG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                        +DD++I+ S SG +  L ++   A+     + A+T   +S +   AD
Sbjct: 70  ETVTP-----TFEKDDILIIGSGSGETKGLVSMAEKAKSIGGTIAAVTIFPESTIGQLAD 124

Query: 158 IVLTLPKEPESCPHGL----APTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           I + +P  P+           P  S   Q      DA+ +  +E +    N  Y  H
Sbjct: 125 ITIKMPGSPKDQSESNFKTIQPMGSLFEQTLLLFYDAVILRFMEKKGLDTNKMYGKH 181


>gi|251811980|ref|ZP_04826453.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|251804489|gb|EES57146.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
          Length = 286

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +   +       + IK  +  + 
Sbjct: 73  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETLNAAIIDEICDLIKNSET-IF 129

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 130 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 189

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 190 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 248

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 249 LYYRYIALNYQSSLDF 264


>gi|210634033|ref|ZP_03297951.1| hypothetical protein COLSTE_01869 [Collinsella stercoris DSM 13279]
 gi|210158977|gb|EEA89948.1| hypothetical protein COLSTE_01869 [Collinsella stercoris DSM 13279]
          Length = 503

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 62/167 (37%), Gaps = 8/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  + +AL      S   +    P  +   +           +S   
Sbjct: 51  NIPMVSAIMQSVSGVDMGVALATEGGISF-IYGSQTPESEAAMVKAVKDHKAGFVESDST 109

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +     +   I +  +     + V D+G    KL GI+T  D   +  +D ++  V + M
Sbjct: 110 LTPDMTMEQVIALKDKTGHSTMPVTDDGTPRGKLLGIVTSRDYRPS--RDDHSKKVAEFM 167

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  V  +D  L  A  L+    ++ L VVDD    +GIV   D
Sbjct: 168 TPRAELIVGDKDITLKDANDLIWDKKLNALPVVDDNDHLVGIVFRKD 214


>gi|73663456|ref|YP_302237.1| 6-phospho-3-hexuloisomerase [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72495971|dbj|BAE19292.1| putative 6-phospho-3-hexuloisomerase [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 182

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +    + ++     +V + G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDELDHTLSHVRDNEAEAFLAQVVKA-NQVFVAGKGRSGFVANSFAMRLNQLGKYAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         IT+DDL +V+S SGS++ L+ +   A+     ++ +T+   S +   A+
Sbjct: 70  ESTTP-----SITKDDLFVVISGSGSTEHLRILTEKAKSVGAEVVLLTTSPNSAIGKLAN 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q    + D++ + L+   N  E      H
Sbjct: 125 AVIELPAGTKYDAEGSTQPLGSLFEQASQILLDSIVLDLMSELNVDEETMQQNH 178


>gi|315640957|ref|ZP_07896050.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus italicus DSM 15952]
 gi|315483269|gb|EFU73772.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus italicus DSM 15952]
          Length = 266

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 62/152 (40%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            Q    V+KIK+ K R+ + G+G SG  G++ +  L   G  +     +     +  +  
Sbjct: 107 DQLQDVVKKIKSAK-RIFVFGVGSSGLSGAEFSQRLLRMGLNTISSADSHMMVINSSITG 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+  +S SG + E+   +  A+     ++ +T   KS +   +DI++          
Sbjct: 166 PGDLVFGISASGETKEVNNAMKLAKENKATIVGMTCFPKSALGNISDILIQGYSSLFVGN 225

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  +    +   D L+  LLE +  S+ 
Sbjct: 226 DN--FINTQFSIMYQIDLLSTILLEDKTLSKK 255


>gi|261418180|ref|YP_003251862.1| hypothetical protein GYMC61_0709 [Geobacillus sp. Y412MC61]
 gi|319767860|ref|YP_004133361.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
 gi|261374637|gb|ACX77380.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
 gi|317112726|gb|ADU95218.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
          Length = 214

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SVE 286
               + +A+ +L   R   + VVD   +L G++T  D+          H+ L  L   V 
Sbjct: 16  PTNTIAEALQLLRHHRIRHLPVVDGEGRLLGLVTSQDLRDASPSIFHLHEHLEDLQKPVS 75

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M  +  V      +     L  +H I  L +V +  K +GI+   DLLR
Sbjct: 76  TIMKTDLIVGHPLDFVEEVAALFYEHRIGCLPIV-NHGKLVGIITQTDLLR 125



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 25/51 (49%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE +M      +     +  A+QLLR H I  L VVD   + +G+V   DL
Sbjct: 3   VEQIMKAPVVTLCPTNTIAEALQLLRHHRIRHLPVVDGEGRLLGLVTSQDL 53



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 5/82 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           + +   +  E R GC+ +V+   KL GIIT+ D+ R F +          + IK P    
Sbjct: 91  VEEVAALFYEHRIGCLPIVN-HGKLVGIITQTDLLRTFIELTGVHQPGSQIEIKVP---N 146

Query: 298 EDTLLTVAMQLLRQHNISVLMV 319
           E  +L+ A  ++ + ++++  V
Sbjct: 147 ETGMLSKAAAIISERHVNIASV 168


>gi|158334130|ref|YP_001515302.1| Cl- channel, voltage gated [Acaryochloris marina MBIC11017]
 gi|158304371|gb|ABW25988.1| Cl- channel, voltage gated, putative [Acaryochloris marina
           MBIC11017]
          Length = 871

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKN 292
                L  A  I S        V+ E ++L GI++  D+ R   +       + D+M   
Sbjct: 459 PSDLSLDAARKIFSRSHHRGFPVL-EDRRLVGILSRTDLNRVTQQQKPGDTLIRDIMTPQ 517

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  +     L+  + +L + +IS L V+D  +K IGI+   D++  
Sbjct: 518 PLTVGPSASLSDVLYILNRSHISRLPVLD-GRKLIGIITRADIIHA 562



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 1/61 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + L+ L+ ED+M +  + +  D  L  A ++  + +     V+ + ++ +GI+   DL 
Sbjct: 439 QRMLDALTAEDIMQRQVETLPSDLSLDAARKIFSRSHHRGFPVL-EDRRLVGILSRTDLN 497

Query: 337 R 337
           R
Sbjct: 498 R 498



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                  V     L D + IL+      + V+D G+KL GIIT  DI   
Sbjct: 514 MTPQPLTVGPSASLSDVLYILNRSHISRLPVLD-GRKLIGIITRADIIHA 562


>gi|187920973|ref|YP_001890005.1| putative signal transduction protein with CBS domains [Burkholderia
           phytofirmans PsJN]
 gi|187719411|gb|ACD20634.1| putative signal transduction protein with CBS domains [Burkholderia
           phytofirmans PsJN]
          Length = 229

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 45/130 (34%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   I  +       V+D    + G+I+EGD+FR      +           
Sbjct: 14  VTPEMTVREVARIFVDNGISGAPVLDRDGHVAGMISEGDLFRRAEIGTDERTRTSWLDFW 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                         L V DVM  +   +  +T L     +L    I  + V D   + +G
Sbjct: 74  SASEEARDYIKTHALKVRDVMTTDVVTVQPETQLGEVAGILETRRIKRVPVTD-AGRLVG 132

Query: 329 IVHFLDLLRF 338
           IV   +L++ 
Sbjct: 133 IVSRANLVQA 142



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 22/55 (40%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM  N   +  +  +    ++   + IS   V+D      G++   DL R
Sbjct: 1   MRASDVMTSNVISVTPEMTVREVARIFVDNGISGAPVLDRDGHVAGMISEGDLFR 55


>gi|298674002|ref|YP_003725752.1| putative signal transduction protein [Methanohalobium evestigatum
           Z-7303]
 gi|298286990|gb|ADI72956.1| putative signal transduction protein with CBS domains
           [Methanohalobium evestigatum Z-7303]
          Length = 211

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--T 282
              S+  + I   ++D    +S+   G + +V +     G+ITE D+  +    D+    
Sbjct: 28  MNRSVYTIDIDASVVDVAKEMSKNNVGSIIIV-QNNDPVGVITERDLVKKILTGDIRPSR 86

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++  +VM          T +  A +L+ + NI  L+V+    K +G +   D+L
Sbjct: 87  ITAGEVMSSPLITTKPSTSVIDAAELMVKSNIRRLIVM-QDNKIVGFITDRDIL 139



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + L+V ++M ++   I  D  +    + + ++N+  +++V      +G++   DL++ 
Sbjct: 20  DNLTVHEIMNRSVYTIDIDASVVDVAKEMSKNNVGSIIIV-QNNDPVGVITERDLVKK 76


>gi|118586501|ref|ZP_01543945.1| hexulose-6-phosphate isomerase [Oenococcus oeni ATCC BAA-1163]
 gi|118433065|gb|EAV39787.1| hexulose-6-phosphate isomerase [Oenococcus oeni ATCC BAA-1163]
          Length = 180

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 73/168 (43%), Gaps = 10/168 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           +++  ++  +   AVEKI + + R+ + G G+SG +    A  L   G   + +      
Sbjct: 12  TTVMDDVDEKQLQAVEKIISKEKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYVIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG++  +      A +  + ++A+TS ++S +A ++D+ L +
Sbjct: 72  -----SIAAGDVLVSVSGSGTTGSVLEPTEKAHQNGVEVVAVTSNSQSPLAKNSDVALIV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           P   ++        L  T          D L + L   R+ + ND   
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQTTHITLDILTLMLS-RRDNTSNDAAK 173


>gi|77918946|ref|YP_356761.1| putative acetoin utilization protein AcuB [Pelobacter carbinolicus
           DSM 2380]
 gi|77545029|gb|ABA88591.1| putative acetoin utilization protein AcuB [Pelobacter carbinolicus
           DSM 2380]
          Length = 149

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  V++   L     I    +F  + V+ E  +L GII++ D+ +     L T   
Sbjct: 7   MTKRVVTVQMDDTLRSINAIFCSAKFNHLLVL-EDGELVGIISDRDLLKATSPFLGTAAE 65

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                         +M ++         +  A++LL +++IS L V+ +     GIV + 
Sbjct: 66  RPQDASRWERKAHQIMTRDLITTHPHASIKDAVELLLRNSISCLPVLTEEGHVEGIVTWK 125

Query: 334 DLLR 337
           DL+R
Sbjct: 126 DLIR 129



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +M K    +  D  L     +      + L+V+ +  + +GI+   DLL+ 
Sbjct: 1   MRIASIMTKRVVTVQMDDTLRSINAIFCSAKFNHLLVL-EDGELVGIISDRDLLKA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 12/72 (16%), Positives = 25/72 (34%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +        + DA+ +L      C+ V+ E   ++GI+T  D+ R
Sbjct: 70  ASRWERKAHQIMTRDLITTHPHASIKDAVELLLRNSISCLPVLTEEGHVEGIVTWKDLIR 129

Query: 275 NFHKDLNTLSVE 286
            +       ++E
Sbjct: 130 TYMGLQGEATLE 141


>gi|27367524|ref|NP_763051.1| RpiR family transcriptional regulator [Vibrio vulnificus CMCP6]
 gi|320159376|ref|YP_004191754.1| sialic acid utilization regulator RpiR family [Vibrio vulnificus
           MO6-24/O]
 gi|27359096|gb|AAO08041.1| Transcriptional regulator, RpiR family [Vibrio vulnificus CMCP6]
 gi|319934688|gb|ADV89551.1| sialic acid utilization regulator RpiR family [Vibrio vulnificus
           MO6-24/O]
          Length = 282

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 42/179 (23%), Positives = 70/179 (39%), Gaps = 6/179 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + I A+   +    ++L  E     H AV+ +   + RV I GIG S      L+  
Sbjct: 98  IAQKLIKAKTDAMFQTTNALSYE---ACHQAVQWLSEAR-RVQIVGIGGSALTAKDLSYK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         ++  D+ I +S+SG   E+      A+     +IA++
Sbjct: 154 LLKLGITTLAEQDSHVQIAVARTLSEQDVQIAISFSGERKEILVAAEAAKEQGAKVIALS 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           S  KS +   AD+        +   H  +   S   Q  I D L I L++ R+ S    
Sbjct: 214 SPKKSRLRQIADMTFDT--IADETEHRSSAIASRSAQNVITDLLFIILVQLRDESARQM 270


>gi|163846499|ref|YP_001634543.1| CBS domain-containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222524284|ref|YP_002568755.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
 gi|163667788|gb|ABY34154.1| CBS domain containing protein [Chloroflexus aurantiacus J-10-fl]
 gi|222448163|gb|ACM52429.1| putative signal transduction protein with CBS domains [Chloroflexus
           sp. Y-400-fl]
          Length = 133

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 10/127 (7%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--- 275
              +VMH G      +   P+ D    +SE+    + VVD+   + G+++  D+      
Sbjct: 4   TVGEVMHVGVLTC--RRETPIQDVARQMSEQDVSALVVVDDEGYMVGLVSRTDLVNARLY 61

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIV 330
             + K    L+   +MI +   +     L  A +L+ +  I  ++VV+  +K    IG++
Sbjct: 62  EQYWKHWRGLTAGHIMITDVVSVTPQDTLQHASRLMMERRIHRVIVVEPGEKGLRPIGVL 121

Query: 331 HFLDLLR 337
              D++R
Sbjct: 122 SVTDVVR 128



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 28/59 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +V +VM         +T +    + + + ++S L+VVDD    +G+V   DL+   +
Sbjct: 2   DRTVGEVMHVGVLTCRRETPIQDVARQMSEQDVSALVVVDDEGYMVGLVSRTDLVNARL 60


>gi|302336960|ref|YP_003802166.1| RpiR family transcriptional regulator [Spirochaeta smaragdinae DSM
           11293]
 gi|301634145|gb|ADK79572.1| transcriptional regulator, RpiR family [Spirochaeta smaragdinae DSM
           11293]
          Length = 282

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/179 (21%), Positives = 65/179 (36%), Gaps = 14/179 (7%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +    Q A+  +    + L              F   V +I+  K R+++ G G S    
Sbjct: 99  RKKIFQSAIHVLAMNNKDLE----------DDTFERIVTQIEQSK-RIIVIGYGTSAVTA 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L   L+  G    +      +   L      DL+   S+SG +  + A     +   I
Sbjct: 148 YDLFVKLSRLGFDCHYTTDEHTTAIILSNPREKDLLFCFSFSGETKNIVAQASLVK-GKI 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           P+I I+ E+ S +A  +DI L  P +     +      S  +QLA  D +   L +   
Sbjct: 207 PIICISGEDNSQLAKLSDIYL--PIQSFETTYRNESIVSRYVQLAAIDIIFSCLAQRAG 263


>gi|293605940|ref|ZP_06688310.1| inosine-5'-monophosphate dehydrogenase [Achromobacter piechaudii
           ATCC 43553]
 gi|292815727|gb|EFF74838.1| inosine-5'-monophosphate dehydrogenase [Achromobacter piechaudii
           ATCC 43553]
          Length = 486

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIG-----IIHKNLSADAQAREVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG+KL GI+T  D+   F ++L+   + ++
Sbjct: 95  DPVTVTPQMKVRDAIALQRQHGISGLPVV-EGRKLVGIVTNRDLR--FEENLDQ-PLRNI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPQERLVTMKEGATLDEAQALMHKHRLERVLIVNDGFELRGLATVKDIVK 201


>gi|210610047|ref|ZP_03288226.1| hypothetical protein CLONEX_00412 [Clostridium nexile DSM 1787]
 gi|210152658|gb|EEA83664.1| hypothetical protein CLONEX_00412 [Clostridium nexile DSM 1787]
          Length = 484

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 62/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEQQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++ + R   V +  EG+KL GIIT  D+   F +D  T  +++ 
Sbjct: 96  DPFSLSPEHTLQDADDLMGKFRISGVPIT-EGKKLVGIITNRDLK--FEEDF-TKKIKES 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L +     L +VD      G++   D+
Sbjct: 152 MTSEGLITAPEGITLEEAKKILAKARKEKLPIVDKDFNLKGLITIKDI 199


>gi|27467260|ref|NP_763897.1| hypothetical protein SE0342 [Staphylococcus epidermidis ATCC 12228]
 gi|27314803|gb|AAO03939.1|AE016745_38 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
          Length = 182

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+S+L    + ++      +     R+   G G+SG + +  A  L      ++ V 
Sbjct: 11  LEELDSTLSQVDNTEYERFANDVIGAD-RIFTAGKGRSGFVANSFAMRLNQLDKNAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I   DL I++S SGS++ L+ +   A+     ++ +T+  +S +A  A+
Sbjct: 70  ESTTP-----SIKEHDLFIIISGSGSTEHLRLLAEKAQSVGAKIVLLTTNAESPIANLAE 124

Query: 158 IVLTLPKEPESCPHG-LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q  L   D++ + L+++ + SE      H
Sbjct: 125 TVVELPAGTKHDVEGSKQPLGSLFEQASLIFLDSVVLPLMDAFHISEKTMQENH 178


>gi|20090245|ref|NP_616320.1| 6-phospho-3-hexuloisomerase [Methanosarcina acetivorans C2A]
 gi|19915239|gb|AAM04800.1| 6-phospho-3-hexuloisomerase [Methanosarcina acetivorans C2A]
          Length = 216

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 58/145 (40%), Gaps = 6/145 (4%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MK   V      I++ +  + +L   ++          ++KI   + RV + G G+SG +
Sbjct: 13  MKKDQVNDCKDVILSMELMVDNLSDVVKMLDCQAIESMLQKIMEGE-RVFVMGAGRSGLV 71

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
               A  L   G   + V            +   D++I +S SG +  +  +    +   
Sbjct: 72  AKAFAMRLMHLGFSVYVVGETTTP-----AVHPQDVVIAISGSGETRSIANLGRIVKEIG 126

Query: 139 IPLIAITSENKSVVACHADIVLTLP 163
             LI +TS+  S +   +DI + LP
Sbjct: 127 STLITVTSKKDSSLGKISDITMVLP 151


>gi|55980786|ref|YP_144083.1| CBS domain-containing protein [Thermus thermophilus HB8]
 gi|55772199|dbj|BAD70640.1| CBS domain protein [Thermus thermophilus HB8]
          Length = 585

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLS 284
                 V     + +A   + E+    + V     +  GI+T+ D+  R   + L  +  
Sbjct: 145 QRPPVFVDPTASVEEAARRMREEGISSLLV---RGEPLGILTDRDLRNRVLAEGLPPSTP 201

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  V  +    +  DT L  A+  + +  I  L +    ++ +G+V   DLL
Sbjct: 202 VGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLT-RGEEVVGVVTHTDLL 252



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R     L    V +++ + P  +     +  A + +R+  IS L+V     + +GI+   
Sbjct: 130 RVLEPGLAR-PVGELVQRPPVFVDPTASVEEAARRMREEGISSLLV---RGEPLGILTDR 185

Query: 334 DL 335
           DL
Sbjct: 186 DL 187


>gi|167914709|ref|ZP_02501800.1| membrane protein, HPP family/CBS domain [Burkholderia pseudomallei
           112]
          Length = 311

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 55/134 (41%), Gaps = 9/134 (6%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +    GG         +    +      V+    L  A+   SE       +    + L+
Sbjct: 96  HRYPHGGAARPHADSNAHAAAAPLHARFVRAD--LEAALKNRSE------WLDVAPEDLE 147

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
            ++ E ++ R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   
Sbjct: 148 SLLRETEL-RAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADA 206

Query: 325 KAIGIVHFLDLLRF 338
           + +GIV   DL + 
Sbjct: 207 RVVGIVTRADLSKA 220



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 178 IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 237

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 238 RSLVGPAFVARAVMSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 297

Query: 336 LRFGI 340
           +  G+
Sbjct: 298 I-AGL 301



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V+   P+ + + + ++     + VVD   +L GI+T+ D+    ++
Sbjct: 251 MSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYR 303


>gi|126179739|ref|YP_001047704.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125862533|gb|ABN57722.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 315

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 54/130 (41%), Gaps = 3/130 (2%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                G      ++ +    +  LV   I   + DA+ I+  K  G + + D   +LKGI
Sbjct: 106 QVKHGGNFLAAINEGLREIMTPHLVTMPITGAIADAVEIIVNKNIGGIPITDAEGELKGI 165

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +TE D+ +    + +    ED+M  + +V   DT +    + + +     L VV      
Sbjct: 166 VTERDVMKVLATEHSGRKAEDIMNASVRVTGPDTPIGNVCREMVRCRFRRLPVV-ADDVL 224

Query: 327 IGIVHFLDLL 336
            GIV   D++
Sbjct: 225 CGIVTATDIM 234



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 57/132 (43%), Gaps = 17/132 (12%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKD-- 279
           +  +   + + +    +I A+ I++ + F  + VVD G + L+GI+T GDI         
Sbjct: 42  MAIATRDVVVAQQTTTIIQAVGIMTREGFRRLPVVDAGTRHLRGIVTVGDIIDFMGGGDK 101

Query: 280 LNTLSVE--------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            N + V+              ++M  +   +     +  A++++   NI  + + D   +
Sbjct: 102 FNLVQVKHGGNFLAAINEGLREIMTPHLVTMPITGAIADAVEIIVNKNIGGIPITDAEGE 161

Query: 326 AIGIVHFLDLLR 337
             GIV   D+++
Sbjct: 162 LKGIVTERDVMK 173



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 46/126 (36%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----L 280
              S+ +     P+ +    +   RF  + VV +   L GI+T  DI     K      L
Sbjct: 188 MNASVRVTGPDTPIGNVCREMVRCRFRRLPVVADD-VLCGIVTATDIMSYLGKGKAFEQL 246

Query: 281 NTLSVEDVMIKNPK--------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            T    +VM    +         I  D  +      + +  +  L V++D    +G+V  
Sbjct: 247 TTGDSAEVMGAPVRSLLSGELHTITPDRNIHDIALEMIRRRVGALPVIEDS-HLVGLVTE 305

Query: 333 LDLLRF 338
            DL++ 
Sbjct: 306 YDLVKA 311



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +     + D    +  +R G + V+ E   L G++TE D+ + F
Sbjct: 268 HTITPDRNIHDIALEMIRRRVGALPVI-EDSHLVGLVTEYDLVKAF 312


>gi|257469865|ref|ZP_05633957.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|317064094|ref|ZP_07928579.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
 gi|313689770|gb|EFS26605.1| oxygen-independent coproporphyrinogen III oxidase [Fusobacterium
           ulcerans ATCC 49185]
          Length = 538

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/143 (23%), Positives = 64/143 (44%), Gaps = 3/143 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   AV+ I   + ++++ G+G SG +       L   G  + F +        L  +  
Sbjct: 376 ELEKAVKMISEAR-KIMLAGVGFSGIVAKDFHFKLLELGKQTLFENDTHMQLSYLATMNE 434

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D++ V+S SG + E+  +   A+   + +I +TS  +S +    DI L+   E +S   
Sbjct: 435 NDVLFVISHSGKTLEVFNLAKAAKNRKVKIITLTSVVQSPIRELGDIKLST-VEMKSD-F 492

Query: 172 GLAPTTSAIMQLAIGDALAIALL 194
                +  I QL + D + I L+
Sbjct: 493 RATALSPRISQLTVIDMIYIKLM 515


>gi|317404194|gb|EFV84632.1| inosine-5'-monophosphate dehydrogenase [Achromobacter xylosoxidans
           C54]
          Length = 486

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 69/171 (40%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +          ++H            + V      I +
Sbjct: 40  NIPLVSAAMDTVTESRLAIAMAQEGGIG-----IIHKNLSADAQAREVARVKRHEFGIVI 94

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + DAI +  +     + VV EG+KL GI+T  D+   F ++L+   + ++
Sbjct: 95  DPVTVTPQMKVRDAIALQRQHGISGLPVV-EGRKLVGIVTNRDLR--FEENLDQ-PLRNI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E   L  A  L+ +H +  +++V+D  +  G+    D+++
Sbjct: 151 MTPQERLVTMKEGATLDEAQALMHKHRLERVLIVNDGFELRGLATVKDIVK 201


>gi|253682488|ref|ZP_04863285.1| nucleotidyl transferase [Clostridium botulinum D str. 1873]
 gi|253562200|gb|EES91652.1| nucleotidyl transferase [Clostridium botulinum D str. 1873]
          Length = 349

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
           M     +  V     + DA+  + +   G V + ++ +K+ G++T+G+I R   K     
Sbjct: 1   MKFSMDMYCVSDDATIKDAMKSIDKNLIGAVFITNKDKKVIGVVTDGNIRRAILKGCTIE 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            SV+++   N K + +        + + ++NI  L ++D+  K I
Sbjct: 61  DSVKNIYHTNFKYVNKLVSKQKVKEKMLRYNIRQLPLLDEEGKLI 105



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 23/44 (52%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +D  +  AM+ + ++ I  + + +  +K IG+V   ++ R 
Sbjct: 9   CVSDDATIKDAMKSIDKNLIGAVFITNKDKKVIGVVTDGNIRRA 52


>gi|226327461|ref|ZP_03802979.1| hypothetical protein PROPEN_01332 [Proteus penneri ATCC 35198]
 gi|225203987|gb|EEG86341.1| hypothetical protein PROPEN_01332 [Proteus penneri ATCC 35198]
          Length = 295

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q   AV  + +    + I G+G SG     L + L   G     V    
Sbjct: 121 LSETLNLLDMKQVQGAVNALLSA-NYIFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ I +S SG+S E    L  A+      IA+T    S +  +AD  L
Sbjct: 180 FMYMQASLLKPGDVAIGISHSGNSPETVHALKLAKEAGASTIALTHNLGSQIMEYADHHL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L+++
Sbjct: 240 INGNRQGKLQGDSI--GTKTAQLFVLDLLYTLLVQA 273


>gi|144901289|emb|CAM78153.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
           MSR-1]
          Length = 833

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/176 (21%), Positives = 65/176 (36%), Gaps = 12/176 (6%)

Query: 173 LAPTTSAIMQLAIGDA-LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH------ 225
            AP  +      +GDA L   +   R+F   +      G    +  +    V H      
Sbjct: 76  SAPIKTIHGATTLGDAGLRFQMEGVRHFVVVNDAGRAVGVISQSDVILRHGVEHYLVLRN 135

Query: 226 ----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DL 280
                   +  +     L +A+  ++        VV +  +  GIITE D+ R     D 
Sbjct: 136 VGSAINRPMVKIHPQASLTEAVAQINAGHADAAIVVGDHGEAPGIITERDLIRIIAGGDG 195

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +SV D+  +    + E   L  A  +L + +I  L V  +  +  G++ F D+L
Sbjct: 196 LPVSVGDIASRPLISVCETDSLLSARNILEERHIRHLAVSTEDGELKGLLSFSDIL 251



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 44/114 (38%), Gaps = 10/114 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-----NTLSVED 287
                 +++A   +++ R   + +  E     GI TE D       D          +  
Sbjct: 18  CSPDTTILEAARAMAQARCSSIIIT-ENTLPVGIWTERD---TLDIDFADPESFNRPIAS 73

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD-LLRFGI 340
           VM    K I   T L  A    +   +   +VV+D  +A+G++   D +LR G+
Sbjct: 74  VMSAPIKTIHGATTLGDAGLRFQMEGVRHFVVVNDAGRAVGVISQSDVILRHGV 127



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 43/115 (37%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               I  +     L DA      +      VV++  +  G+I++ D  +       L   
Sbjct: 75  MSAPIKTIHGATTLGDAGLRFQMEGVRHFVVVNDAGRAVGVISQSDVILRHGVEHYLVLR 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V   + +    I     LT A+  +   +    +VV D  +A GI+   DL+R 
Sbjct: 135 NVGSAINRPMVKIHPQASLTEAVAQINAGHADAAIVVGDHGEAPGIITERDLIRI 189


>gi|153005216|ref|YP_001379541.1| signal-transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028789|gb|ABS26557.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 145

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 43/105 (40%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMI 290
            +      D   ++ E+  G V + +E  +  G IT+ D+      D       ++ VM 
Sbjct: 14  CRPDDTARDCARLMKEENIGFVPICNESDEPVGTITDRDLALRILADGRPSDAKLDGVMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +          L  A +L+R+H  S +MV D   K  G++   D+
Sbjct: 74  REVVSCRLGDDLRDAERLMREHRKSRIMVCDTEGKLQGVISLSDI 118



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V+ VM K+      D       +L+++ NI  + + ++  + +G +   DL
Sbjct: 2   ATVDSVM-KSAMCCRPDDTARDCARLMKEENIGFVPICNESDEPVGTITDRDL 53



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
            ++G  L DA  ++ E R   + V D   KL+G+I+  DI     +++   ++ DV 
Sbjct: 79  CRLGDDLRDAERLMREHRKSRIMVCDTEGKLQGVISLSDIADEEDEEIAGRTLRDVA 135


>gi|325568581|ref|ZP_08144874.1| 3-hexulose-6-phosphate isomerase [Enterococcus casseliflavus ATCC
           12755]
 gi|325157619|gb|EGC69775.1| 3-hexulose-6-phosphate isomerase [Enterococcus casseliflavus ATCC
           12755]
          Length = 197

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  +++     +    V +IKA    + + G G+SG      A+ L   G     V 
Sbjct: 22  LNELTQNVKKIDLSEIENFVHQIKAA-NHIFLNGAGRSGIAIQAFANRLMHLGFYVSLVG 80

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A++  + L  +T + +S +   AD
Sbjct: 81  EISSPHS-----KPGDLLIICSGSGETGSLKSLAEKAKQSGVDLALVTMKKESTIGKLAD 135

Query: 158 IVLTLP---KEPESCPHG--LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            VL LP   KE           P  SA  QLA    D + + L+E    +    +  H
Sbjct: 136 AVLVLPGTTKEENERSEDDFAQPMGSAFEQLAFLIFDGMVLNLMEETGETSEKMFGRH 193


>gi|319780634|ref|YP_004140110.1| helix-turn-helix protein RpiR [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317166522|gb|ADV10060.1| helix-turn-helix protein RpiR [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 314

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 58/163 (35%), Gaps = 6/163 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
                +R L   E  L      Q   A E I   +   V    G S  +  +    L   
Sbjct: 124 VFGEARRALQEAERQLD---LAQLQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRY 180

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G                  +   DL+I +S +G + E+   +  A+ +    IA+T+   
Sbjct: 181 GITVSAQCDPYLMRMTASTLKPGDLVIAISATGRTREVIEAVELAKHYRANAIAVTA-PD 239

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + +A   D+ LT+       P  L PT S    LA  D LA+A
Sbjct: 240 TELARTCDVRLTVAVPE--YPDTLKPTASRFAFLAAIDLLAVA 280


>gi|167586440|ref|ZP_02378828.1| glucokinase [Burkholderia ubonensis Bu]
          Length = 642

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 66/187 (35%), Gaps = 7/187 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
                   + ++      + +      +  L   L  E       A+E +   + R+   
Sbjct: 419 PMSHSQVHLGDTATDFGAKVLDNTVSSILQLREHLNFE---HVENAIEILNGAR-RIEFY 474

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G S  +           G P+              ++ + D+I+ +S SG + EL  +
Sbjct: 475 GLGNSNIVAQDAHYKFFRFGIPTIAYGDLYMQAASAALLGKGDVIVAVSKSGRAPELLRV 534

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A +    +IAITS   + +A  A + L    +            S I+ L + D LA
Sbjct: 535 LEVAMQAGAKVIAITSS-NTPLAKRATVALET--DHIEMRESQLSMISRILHLLMIDILA 591

Query: 191 IALLESR 197
           + +   R
Sbjct: 592 VGVAIRR 598


>gi|325959819|ref|YP_004291285.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
 gi|325331251|gb|ADZ10313.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
          Length = 159

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 49/132 (37%), Gaps = 34/132 (25%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------------- 277
           ++D      + +     VVDE   + G+I+EGDI R                        
Sbjct: 20  IVDVAQSFRDNKISGAPVVDENNHVVGVISEGDIMRLIEIHSPKINLILPAPLDLIELPI 79

Query: 278 -------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                        +   +  ++ +M K    +  DT +  A +LL  H I  L V+D+  
Sbjct: 80  KMKYELDEVAEDMQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDG 139

Query: 325 KAIGIVHFLDLL 336
           K +GI+   D++
Sbjct: 140 KLVGIITRGDII 151



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VED+M K      E   +    Q  R + IS   VVD+    +G++   D++R 
Sbjct: 3   VEDIMQKEVIKFNELDKIVDVAQSFRDNKISGAPVVDENNHVVGVISEGDIMRL 56



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 25/66 (37%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                           I  VK    +IDA  +L   +   + V+D   KL GIIT GDI 
Sbjct: 92  MQKAGSTVIDQIMTKKIIKVKPDTSVIDAAKLLDSHKIKRLPVIDNDGKLVGIITRGDII 151

Query: 274 RNFHKD 279
            +  + 
Sbjct: 152 ASMVRG 157


>gi|289192170|ref|YP_003458111.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus sp. FS406-22]
 gi|288938620|gb|ADC69375.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus sp. FS406-22]
          Length = 177

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
               E   + +  +++I   K ++ + G+G+SG+IG   A  L   G  S+FV       
Sbjct: 18  YTNDEWKNKLNSLIDRIIKAK-KIFVFGVGRSGYIGRCFAMRLMHLGFKSYFVGETTTP- 75

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
                  +DDL+I++S SG ++ +  +   A+  +  ++AI  E    +   AD+ + L 
Sbjct: 76  ----SYEKDDLLILISGSGRTESVLTVAKKAKGINNNIVAIVCE-CGNIIDFADLTIPLE 130

Query: 164 KEPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            +         P  +   + A    D +   L++  N  E++    H
Sbjct: 131 VKKSKY----LPMGTTFEETALIFLDLVIAELMKRLNLDESEIIKRH 173


>gi|15679234|ref|NP_276351.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622334|gb|AAB85712.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 281

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 9/105 (8%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------KDLNTLSVEDVMIKNP 293
           A  ++       V VVD   K  GI+TE DI R           + ++ +S+  VM +NP
Sbjct: 26  ARNLMLRHGISRVVVVDADGKPVGIVTETDITRKLRVNGPDWRRRPIDKISIRRVMTENP 85

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  +     A +L+ + N+  L+V+D  +   GIV   DLLRF
Sbjct: 86  VTVNVNDTPRDAAELMLRKNVGSLLVMDGEE-LAGIVTKKDLLRF 129



 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 4/124 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           G       +    +       P+ V +     DA  ++  K  G + V+D G++L GI+T
Sbjct: 64  GPDWRRRPIDKISIRRVMTENPVTVNVNDTPRDAAELMLRKNVGSLLVMD-GEELAGIVT 122

Query: 269 EGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + D+ R F  +      V D+M ++ K +  +  L+  + ++ ++NIS ++V D+     
Sbjct: 123 KKDLLRFFKDRCAGRWKVRDLMTEDVKTVTPNHTLSHVIGVMEENNISRVVVTDN-GAVE 181

Query: 328 GIVH 331
           GI+ 
Sbjct: 182 GIIT 185



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 58/162 (35%), Gaps = 31/162 (19%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           ++ D          G       D+M   + +  V     L   I ++ E     V V D 
Sbjct: 122 TKKDLLRFFKDRCAGR--WKVRDLM--TEDVKTVTPNHTLSHVIGVMEENNISRVVVTD- 176

Query: 260 GQKLKGIITEGDIFRNFHKD-------------------------LNTLSVEDVMIKNPK 294
              ++GIIT  ++     +D                         +  L+  D+M ++  
Sbjct: 177 NGAVEGIITSENLSFATFEDPERGIPVERVYFISRTSEEKKRVRTIAMLTAGDIMTEDVI 236

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      + A  ++ ++ IS L VV+D +  +GI+   D++
Sbjct: 237 KVEPSVDASSAAAMMLENGISGLPVVEDDE-LVGIITKTDII 277



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ +  +M     V+ E   +  A  L+ +H IS ++VVD   K +GIV   D+ R 
Sbjct: 3   TVDIGSIMTDEVIVMDETQQVAYARNLMLRHGISRVVVVDADGKPVGIVTETDITRK 59


>gi|14520642|ref|NP_126117.1| hypothetical protein PAB2063 [Pyrococcus abyssi GE5]
 gi|5457858|emb|CAB49348.1| Hypothetical protein, containing CBS domains [Pyrococcus abyssi
           GE5]
          Length = 174

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 54/151 (35%), Gaps = 17/151 (11%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
                               +        VK    L + I++ + +    V VVD+  KL
Sbjct: 19  MARKEELSHNIKYISKVPVKIVMDREFLKVKPETSLFELISMFTSEETSAV-VVDDDGKL 77

Query: 264 KGIITEGDIFRNFHKDL----------------NTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G IT  D+   F                        VEDVMI+ P VI  D  L  A++
Sbjct: 78  IGFITMKDLLHYFVPPRKYSIAGFGMLKKYVLNRATRVEDVMIRRPIVIGVDDDLGQAIK 137

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ +     L V+D  ++  GI+   D++R 
Sbjct: 138 LMVETGKHHLPVIDKDRRVHGILEVKDIIRL 168


>gi|16804832|ref|NP_466317.1| hypothetical protein lmo2795 [Listeria monocytogenes EGD-e]
 gi|47095602|ref|ZP_00233210.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224498359|ref|ZP_03666708.1| hypothetical protein LmonF1_01150 [Listeria monocytogenes Finland
           1988]
 gi|224502792|ref|ZP_03671099.1| hypothetical protein LmonFR_09764 [Listeria monocytogenes FSL
           R2-561]
 gi|254827363|ref|ZP_05232050.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL N3-165]
 gi|254830768|ref|ZP_05235423.1| hypothetical protein Lmon1_05389 [Listeria monocytogenes 10403S]
 gi|254899747|ref|ZP_05259671.1| hypothetical protein LmonJ_08036 [Listeria monocytogenes J0161]
 gi|254913050|ref|ZP_05263062.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes J2818]
 gi|254937431|ref|ZP_05269128.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes F6900]
 gi|255025133|ref|ZP_05297119.1| hypothetical protein LmonocytFSL_00330 [Listeria monocytogenes FSL
           J2-003]
 gi|255029366|ref|ZP_05301317.1| hypothetical protein LmonL_10073 [Listeria monocytogenes LO28]
 gi|284800319|ref|YP_003412184.1| hypothetical protein LM5578_0064 [Listeria monocytogenes 08-5578]
 gi|284993504|ref|YP_003415272.1| hypothetical protein LM5923_0064 [Listeria monocytogenes 08-5923]
 gi|16412295|emb|CAD01008.1| lmo2795 [Listeria monocytogenes EGD-e]
 gi|47016032|gb|EAL06957.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258599741|gb|EEW13066.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL N3-165]
 gi|258610033|gb|EEW22641.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes F6900]
 gi|284055881|gb|ADB66822.1| hypothetical protein LM5578_0064 [Listeria monocytogenes 08-5578]
 gi|284058971|gb|ADB69910.1| hypothetical protein LM5923_0064 [Listeria monocytogenes 08-5923]
 gi|293591050|gb|EFF99384.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes J2818]
          Length = 268

 Score = 78.0 bits (191), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKNAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ +N
Sbjct: 224 SKRYFANSQFSIMYVMDIISMMLLQNESYRDN 255


>gi|294508543|ref|YP_003572602.1| hypothetical protein SRM_02729 [Salinibacter ruber M8]
 gi|294344872|emb|CBH25650.1| CBS domain protein [Salinibacter ruber M8]
          Length = 160

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 42/122 (34%), Gaps = 4/122 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH- 277
                +     +        + D I  + ++  G + +  E  ++ GI TE D  R+   
Sbjct: 16  RTKGTLQQNGDVLTATPTDTVYDCIDAMVDRGIGSIVIT-EDDEMVGIFTERDYMRDIAL 74

Query: 278 --KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      V++VM ++      +  L   +  +       L VVDD      I+   D 
Sbjct: 75  KGRSSPETEVQEVMTEDVVTAEAEDQLRDCLDRMNDLQCRHLPVVDDEGNLADIISMRDC 134

Query: 336 LR 337
            +
Sbjct: 135 AK 136


>gi|152982340|ref|YP_001355250.1| hypothetical protein mma_3560 [Janthinobacterium sp. Marseille]
 gi|151282417|gb|ABR90827.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 142

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNP 293
            PLIDA+ I++    G + V+DE  KL GI++E D  R      K    + V D+M    
Sbjct: 22  TPLIDALKIMAVHDVGAMVVIDE-GKLVGILSERDYARKVALANKSSTDICVGDIMTSRV 80

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + ++  +   M L+   N   L V +     IG++   DL++ 
Sbjct: 81  TTVSKEHTVEECMTLMSDGNFRHLPVTEK-GFVIGVISIGDLVKE 124


>gi|108757573|ref|YP_628289.1| CBS domain-containing protein [Myxococcus xanthus DK 1622]
 gi|108461453|gb|ABF86638.1| CBS domain protein [Myxococcus xanthus DK 1622]
          Length = 145

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF--HKDLNT 282
               + ++     L DA   + E   G + V D G +L GIIT+ DI  R     KD N+
Sbjct: 9   MTKDVTVINAKDSLKDAALKMRELSVGPLPVCD-GDRLMGIITDRDIVVRAVSQGKDPNS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V + M    +   +D  ++V  + +++  +  ++ +D  +K +GIV   DLL  
Sbjct: 68  TTVAEAMTGQLEYAFDDEDISVVAEKMKEKKVRRILALDRDKKLVGIVAMGDLLEA 123


>gi|66047926|ref|YP_237767.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. syringae B728a]
 gi|63258633|gb|AAY39729.1| Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase
           DUF294 [Pseudomonas syringae pv. syringae B728a]
          Length = 644

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREA 232


>gi|270157620|ref|ZP_06186277.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|289164007|ref|YP_003454145.1| hypothetical protein LLO_0660 [Legionella longbeachae NSW150]
 gi|269989645|gb|EEZ95899.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|288857180|emb|CBJ10998.1| Conserved hypothetical protein [Legionella longbeachae NSW150]
          Length = 152

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---T 282
           +   +  ++   PL++A   L  +    V V D+   + GIIT  D+ R          T
Sbjct: 15  AQQRLVTIRDDAPLLEAAKFLDGRHINLVVVCDQDGAMVGIITRTDVVRMMAVCQGCGCT 74

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V  VM K+      + LL      +++ N+  + +VD+  K +G+++  D L
Sbjct: 75  VPVATVMTKDVIYCHPNYLLRDVWATMKEKNLLHVPIVDENFKPLGVINARDAL 128



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 23/44 (52%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I +D  L  A + L   +I++++V D     +GI+   D++R
Sbjct: 20  VTIRDDAPLLEAAKFLDGRHINLVVVCDQDGAMVGIITRTDVVR 63


>gi|255659629|ref|ZP_05405038.1| CBS domain protein [Mitsuokella multacida DSM 20544]
 gi|260848191|gb|EEX68198.1| CBS domain protein [Mitsuokella multacida DSM 20544]
          Length = 149

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 55/139 (39%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
               +  VK    + +    + ++    + VVD+   + GI++EGD+ R           
Sbjct: 7   MTKDVVTVKKDASIREIAQTIVDRDVSGLPVVDDDGTVCGIVSEGDLVRKEFAPELPDEL 66

Query: 276 -----------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              + +  +S E +M K    +  D  ++   ++L + +I  + 
Sbjct: 67  CILGAVIYYSGLREYQDAFRKIAAISAEQLMTKKLISVKPDDDVSKVAKILYEKHIKRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+DD +  +GIV   D+++
Sbjct: 127 VLDDEKHLLGIVSRRDIVK 145



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 28/54 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M K+   + +D  +    Q +   ++S L VVDD     GIV   DL+R 
Sbjct: 3   VKDIMTKDVVTVKKDASIREIAQTIVDRDVSGLPVVDDDGTVCGIVSEGDLVRK 56



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 25/73 (34%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +  L             S        +  VK    +     IL EK    V V+D+ + L
Sbjct: 75  YSGLREYQDAFRKIAAISAEQLMTKKLISVKPDDDVSKVAKILYEKHIKRVPVLDDEKHL 134

Query: 264 KGIITEGDIFRNF 276
            GI++  DI +  
Sbjct: 135 LGIVSRRDIVKMM 147


>gi|223932398|ref|ZP_03624400.1| putative signal transduction protein with CBS domains
           [Streptococcus suis 89/1591]
 gi|302023619|ref|ZP_07248830.1| hypothetical protein Ssui0_03021 [Streptococcus suis 05HAS68]
 gi|330832631|ref|YP_004401456.1| putative signal transduction protein with CBS domains
           [Streptococcus suis ST3]
 gi|223898852|gb|EEF65211.1| putative signal transduction protein with CBS domains
           [Streptococcus suis 89/1591]
 gi|329306854|gb|AEB81270.1| putative signal transduction protein with CBS domains
           [Streptococcus suis ST3]
          Length = 218

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADIMREQDLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMIKN   +     L  A  L+ ++ + +L VVD+  +  G++   D+   
Sbjct: 73  NKTKVKDVMIKNVITVSGYASLEDAAYLMYKNKVGILPVVDN-GQLYGVITDRDIFAA 129



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M +    I  DT +  A  ++R+ ++  L V+++  K +G+V 
Sbjct: 1   MSVKDFMTRKVVYISPDTTIAHAADIMREQDLHRLPVIEND-KLVGLVT 48



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              ++  V     L DA  ++ + + G + VVD   +L G+IT+ DIF  F
Sbjct: 81  MIKNVITVSGYASLEDAAYLMYKNKVGILPVVD-NGQLYGVITDRDIFAAF 130


>gi|157363922|ref|YP_001470689.1| signal transduction protein [Thermotoga lettingae TMO]
 gi|157314526|gb|ABV33625.1| putative signal transduction protein with CBS domains [Thermotoga
           lettingae TMO]
          Length = 148

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 52/129 (40%), Gaps = 23/129 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           V     + + + I+S +    + VV E  ++ G I+E DI R                  
Sbjct: 14  VTKDESVENVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRATVPSYFSLLQSASFIPD 73

Query: 277 -------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                   K +    V + M   P V+ E   L     ++ +HNI V+ VVDD  + +G+
Sbjct: 74  MNQFLRNAKLVKDKPVFEYMSSPPIVVNEHANLIHVADIMIRHNIKVIPVVDDLGRLVGM 133

Query: 330 VHFLDLLRF 338
           +   ++L+ 
Sbjct: 134 IGRTNILKA 142



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 29/56 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V DVM ++   + +D  +   ++++    +S + VV +  + IG +   D++R 
Sbjct: 1   MRVFDVMTRDVTAVTKDESVENVLRIMSSQLLSGIPVVSEDMRVIGFISESDIIRA 56


>gi|86361220|ref|YP_473107.1| hypothetical protein RHE_PF00490 [Rhizobium etli CFN 42]
 gi|86285322|gb|ABC94380.1| hypothetical conserved protein [Rhizobium etli CFN 42]
          Length = 225

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 56/127 (44%), Gaps = 23/127 (18%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNF-------------- 276
           +     +  A+ ++ +     + VVD+  ++ G++TEGD  + R                
Sbjct: 14  ISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLLLRREVRYAPRPARAPELIS 73

Query: 277 HKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             DL      N   V DVM ++  V   D+ ++   + L+ H I  L +V+D  + +GIV
Sbjct: 74  EIDLERYIGSNGWCVADVMSQDVIVARPDSEVSDIAESLQVHRIKRLPIVEDE-RLVGIV 132

Query: 331 HFLDLLR 337
              D+LR
Sbjct: 133 SRRDILR 139



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M      I  D  +  A+ ++ Q+++S L VVDD  +  G+V   DLL
Sbjct: 1   MQARDIMTTTVVSISPDVSVRHAVAMMLQNHVSGLPVVDDHGRVCGMVTEGDLL 54


>gi|332359069|gb|EGJ36890.1| CBS domain protein [Streptococcus sanguinis SK49]
          Length = 218

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E++   + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPNTTIAHAADMMREQKLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V DVMI++   I +   L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVGDVMIRDVVTISQFASLEDATYLMLKNKIGILPVVDNEQ-IYGVITDRDIFKA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  +T +  A  ++R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPNTTIAHAADMMREQKLHRLPVIENDQ-LVGLVT 48



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             L DA  ++ + + G + VVD  +++ G+IT+ DIF+ F
Sbjct: 92  ASLEDATYLMLKNKIGILPVVD-NEQIYGVITDRDIFKAF 130


>gi|330954935|gb|EGH55195.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae Cit 7]
          Length = 640

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 194 AMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADFSA 253

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 254 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 304



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 187 NTRLGELAMRHPVMCSPETPMRDAVKLMHEQQVGSIVIVDERQAPLGIFTLRDLREA 243


>gi|315634565|ref|ZP_07889850.1| RpiR family transcriptional regulator [Aggregatibacter segnis ATCC
           33393]
 gi|315476792|gb|EFU67539.1| RpiR family transcriptional regulator [Aggregatibacter segnis ATCC
           33393]
          Length = 302

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 65/173 (37%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q  + +++ E   L  L          Q    V  I+    RV I G+G SG       
Sbjct: 119 LQSVINTVMDETIDLLDL---------NQLELVVRFIRRA-NRVFIFGVGTSGVTAEDAK 168

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           +     G P          +    ++ R+D+ I +S SG S E    L  A+      +A
Sbjct: 169 NKFMRIGIPVDASGNNHFMYMQAALLQRNDVAIGISHSGYSQETAHALKIAKDNGATTVA 228

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T   +S +  HAD VL    +            + I QL + D +   ++++
Sbjct: 229 LTHSMRSPLTEHADFVLVNGNKQGKLQGDSI--GTKISQLFVLDLIYALIVQA 279


>gi|330970908|gb|EGH70974.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. aceris str. M302273PT]
          Length = 644

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQAPLGIFTLRDLREA 232


>gi|323528913|ref|YP_004231065.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1001]
 gi|323385915|gb|ADX58005.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1001]
          Length = 286

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 45/200 (22%), Positives = 73/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGLPYASAAIARDDDVQTLMDKVGEAAVDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           +   + RV   G+G  SG +    A         S     A       GM+   D+   +
Sbjct: 128 LSGAR-RVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDAHLQRLYAGMMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVPSPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|170708610|ref|ZP_02899050.1| CBS domain protein [Bacillus anthracis str. A0389]
 gi|170126496|gb|EDS95383.1| CBS domain protein [Bacillus anthracis str. A0389]
          Length = 139

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +VM  N   +  D  L  A +L+ QH I  L VV+  Q  +G++   D
Sbjct: 67  KITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQ-LVGMLALGD 116



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|167841602|ref|ZP_02468286.1| inositol-5-monophosphate dehydrogenase [Burkholderia thailandensis
           MSMB43]
          Length = 486

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NMPLVSAAMDTVTEGRLAIAMAQQGGVGIVH-KNLTPVEQAREVAKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D I +  +       VV EG KL GI+T  D+   F   L+   V+ +M   
Sbjct: 99  VPPSMKVRDVIALSRQHGISGFPVV-EGPKLVGIVTNRDLR--FETRLDE-PVKSIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                ++E T L  A  L+  H +  ++VV+   +  G++   D+ +
Sbjct: 155 ERLVTVVEGTPLAEAKALMHSHRLERVLVVNAAFELRGLMTVKDITK 201


>gi|152981616|ref|YP_001353724.1| inosine-5'-monophosphate dehydrogenase oxidoreductase protein
           [Janthinobacterium sp. Marseille]
 gi|151281693|gb|ABR90103.1| inosine-5'-monophosphate dehydrogenase oxidoreductase protein
           [Janthinobacterium sp. Marseille]
          Length = 486

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 31/170 (18%), Positives = 62/170 (36%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NIPLLSAAMDTVTEGRLAIAMAQEGGIGIIHKNLTAKEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D + +  +       VV EG+ + GIIT  D+     ++     V   M 
Sbjct: 97  ITIPPDTKIRDVLALSQQHGISGFPVV-EGKTVVGIITNRDLRF---ENELDAPVSSKMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + +   L  A +L+ +H +  ++VV+D  +  G++   D+ + 
Sbjct: 153 PKEKLVYVPDGADLVEAKRLMNKHRLERVLVVNDAFELRGLITAKDIQKA 202


>gi|187920240|ref|YP_001889271.1| CBS domain-containing membrane protein [Burkholderia phytofirmans
           PsJN]
 gi|187718678|gb|ACD19901.1| CBS domain containing membrane protein [Burkholderia phytofirmans
           PsJN]
          Length = 230

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/131 (18%), Positives = 41/131 (31%), Gaps = 26/131 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   I  +       V+D    L G+I+EGD+ R      +           
Sbjct: 14  VHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLRRNEIGTDERSRTSWLDHL 73

Query: 283 ---------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                            V DVM      +   T L     +L    I  + V  +  + +
Sbjct: 74  WSASHEARDYIKTHATKVRDVMSTEVVTVQPGTPLGEVASILETRRIKRVPVT-EAGRLV 132

Query: 328 GIVHFLDLLRF 338
           GIV   +L++ 
Sbjct: 133 GIVSRANLVQA 143



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM ++   +  D+ +    ++   + IS   V+D     IG++   DLLR
Sbjct: 1   MRASDVMTRSVISVHPDSTVREVAKIFVDNGISGAPVLDADGHLIGMISEGDLLR 55


>gi|46198773|ref|YP_004440.1| cyclic nucleotide binding protein/CBS domain-containing proteins
           [Thermus thermophilus HB27]
 gi|46196396|gb|AAS80813.1| cyclic nucleotide binding protein/2 cbs domains [Thermus
           thermophilus HB27]
          Length = 585

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 6/112 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLS 284
                 V     + +A   + E+    + V     +  GI+T+ D+  R   + L  +  
Sbjct: 145 QRPPVFVDPTASVEEAARRMREEGISSLLV---RGEPLGILTDRDLRNRVLAEGLPPSTP 201

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  V  +    +  DT L  A+  + +  I  L +    ++ +G+V   DLL
Sbjct: 202 VGQVATRPTFTLPADTPLLEAVAAMLERRIHHLPLT-RGEEVVGVVTHTDLL 252



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +++ + P  +     +  A + +R+  IS L+V     + +GI+   DL
Sbjct: 139 PVGELVQRPPVFVDPTASVEEAARRMREEGISSLLV---RGEPLGILTDRDL 187


>gi|313676663|ref|YP_004054659.1| cbs domain containing protein [Marivirga tractuosa DSM 4126]
 gi|312943361|gb|ADR22551.1| CBS domain containing protein [Marivirga tractuosa DSM 4126]
          Length = 156

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------VED 287
                + +A+ IL +K+     VVDE   L G+I+EGD  +   K     S      V+D
Sbjct: 36  NEHQTIYEAMDILMKKKISGGPVVDENNNLIGVISEGDCLKEIVKGKYNNSPKLPGLVKD 95

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            M  N   I  +T +  A  +  +       V+    K IG +   D++R 
Sbjct: 96  YMATNVIHIDPETNIFEAANMFLRMRFRRFPVL-KEGKLIGQISQRDIMRA 145



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 31/62 (50%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ N++SV+D M  N     E   +  AM +L +  IS   VVD+    IG++   D L
Sbjct: 16  QEEPNSVSVKDYMATNLITFNEHQTIYEAMDILMKKKISGGPVVDENNNLIGVISEGDCL 75

Query: 337 RF 338
           + 
Sbjct: 76  KE 77


>gi|253575643|ref|ZP_04852979.1| RpiR family transcriptional regulator [Paenibacillus sp. oral taxon
           786 str. D14]
 gi|251844981|gb|EES72993.1| RpiR family transcriptional regulator [Paenibacillus sp. oral taxon
           786 str. D14]
          Length = 289

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 60/163 (36%), Gaps = 3/163 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   L+S+  + +     Q   AVE +   K R+ + G+  S  +       L   G 
Sbjct: 99  AMEANHLASITDTTRLLDMNQLSRAVEALCRAK-RIDLYGVATSSIVAQDFYQKLVRIGK 157

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                  +         +   D+ + +S+SG + E    L  A+      +++T  + + 
Sbjct: 158 NCTAFADSHMQITSASSLGEGDVALAISYSGETPETIDALRCAKDSGATTLSLTQYSSNS 217

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +A  ADI L      E    G     S I QL + D L   ++
Sbjct: 218 LASLADIALFSSSLEEGMRRGD--MASRIAQLHVIDILFTGMV 258


>gi|57867776|ref|YP_189462.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis RP62A]
 gi|57638434|gb|AAW55222.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus epidermidis RP62A]
 gi|329726442|gb|EGG62905.1| SIS domain protein [Staphylococcus epidermidis VCU144]
          Length = 290

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +   +       + IK  +  + 
Sbjct: 77  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETINAAIIDEICDLIKNSET-IF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 134 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 194 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 252

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 253 LYYRYIALNYQSSLDF 268


>gi|288942409|ref|YP_003444649.1| inosine-5'-monophosphate dehydrogenase [Allochromatium vinosum DSM
           180]
 gi|288897781|gb|ADC63617.1| inosine-5'-monophosphate dehydrogenase [Allochromatium vinosum DSM
           180]
          Length = 488

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI  AL         +        ++  +    S ++    + 
Sbjct: 40  RIPLVSAAMDTVTESRLAITMALEGGIGIIHKNMSAERQAREVLAVKKYESGIIR---NP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + + +        V V D+  +L GI+T  D+   F   +    V  +M 
Sbjct: 97  ITVSPHMSIGEVLQLTHANNISGVPVTDK-GELVGIVTGRDLR--FETRMGE-PVSAIMT 152

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E       + LL +H I  ++VV+D  +  G++   D+ +  
Sbjct: 153 PKERLVTVQEGASREEVLGLLHKHRIEKVLVVNDRFELRGLITVKDIQKAK 203


>gi|296333369|ref|ZP_06875822.1| hypothetical protein BSU6633_19837 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305675125|ref|YP_003866797.1| hypothetical protein BSUW23_12250 [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296149567|gb|EFG90463.1| hypothetical protein BSU6633_19837 [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305413369|gb|ADM38488.1| hypothetical protein BSUW23_12250 [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 138

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 46/111 (41%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS 284
              ++   +    + +    + +   G + +  E   L+GI+++ DI  R   ++     
Sbjct: 9   MTHNVECCEPTASITELAKKMRDSNVGSIPIC-ENGTLQGIVSDRDIVTRCLAENQMDAK 67

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             D+M  +      D     A QL+ +H I  L ++++  +  GIV   DL
Sbjct: 68  ASDIMSADIVSGHPDMSAEEAGQLMAEHQIRRLPILENE-RIAGIVALGDL 117



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 10/55 (18%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + + D+M  N +       +T   + +R  N+  + +  +     GIV   D++
Sbjct: 2   EIKIRDIMTHNVECCEPTASITELAKKMRDSNVGSIPIC-ENGTLQGIVSDRDIV 55


>gi|254425627|ref|ZP_05039344.1| PAS fold family [Synechococcus sp. PCC 7335]
 gi|196188050|gb|EDX83015.1| PAS fold family [Synechococcus sp. PCC 7335]
          Length = 1428

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 24/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-------------------- 253
            T    +S           V    PL + I ++++    C                    
Sbjct: 3   QTKAPTSSVYQALDIQPLKVNPQTPLNEVIHLMTQASAHCHIPLQNRNSLEPSAMAQHTD 62

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVIL--EDTLLTVAMQLL 309
             +V +  +L GI+TE DI R    +  +   +  + M    + +   ED  +  A+  +
Sbjct: 63  CVLVMDNHQLVGILTEKDIVRLSATNTTITGRTAAEAMTHPVRTLAAEEDLDIYSALSRM 122

Query: 310 RQHNISVLMVVDDCQKAIGIVH 331
            +HNI  L VV+   + IG+V 
Sbjct: 123 HRHNIHHLPVVEAQGEVIGLVT 144



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 47/147 (31%), Gaps = 15/147 (10%)

Query: 200 SENDFYVLHPGGKLGTL----------FVCASDVMHSGDSIPLVKIGCPLIDAITILSEK 249
              DF       ++              +     M +     +V +  P   A   ++ +
Sbjct: 153 KPADFMRFRLVQEVMKTEVIHALTSASMMQIVHQMLTHQVSCVVIVDAPKEQAEGQVTTE 212

Query: 250 RFGCVAVVDEGQ---KLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                 V           GI+TE D+ R      DL    V+D+M     +      L  
Sbjct: 213 PATTEQVNRRQANALVPIGIVTERDVVRVQRLGLDLKETQVQDLMSAPLFLASPQDSLWE 272

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVH 331
             +++R H +  L+V D   +  GI+ 
Sbjct: 273 VDKIMRAHKVRRLVVADTQGRLAGIIT 299



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 20/125 (16%), Positives = 45/125 (36%), Gaps = 3/125 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D   L       T    A  + H   ++   +    +  A++ +       + VV+
Sbjct: 76  LTEKDIVRLSATNTTITGRTAAEAMTHPVRTLA-AEEDLDIYSALSRMHRHNIHHLPVVE 134

Query: 259 EGQKLKGIITEGDIFRNFH-KDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
              ++ G++T   +       D      V++VM       L    +   +  +  H +S 
Sbjct: 135 AQGEVIGLVTPERLRSLMKPADFMRFRLVQEVMKTEVIHALTSASMMQIVHQMLTHQVSC 194

Query: 317 LMVVD 321
           +++VD
Sbjct: 195 VVIVD 199


>gi|186476329|ref|YP_001857799.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184192788|gb|ACC70753.1| CBS domain containing protein [Burkholderia phymatum STM815]
          Length = 165

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 62/134 (46%), Gaps = 6/134 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           P        +  SD++    +    V     + +A+T ++E   G + VV E   L G++
Sbjct: 2   PASVDRRRIMRVSDILKVKGNTLFTVTPDTEVNEAVTTMAEHDIGSL-VVMEYGDLVGML 60

Query: 268 TEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T  +I     ++   + + ++  +M  +P     +T +    +++ +H++  L V+ + +
Sbjct: 61  TFREIILVLSRNGGSVGSTTIRKIMDDHPLTCTPETDVNEVRRMMLEHHVRYLPVM-ESR 119

Query: 325 KAIGIVHFLDLLRF 338
           K +G++ F D+ + 
Sbjct: 120 KLMGVISFYDVAKA 133


>gi|322517389|ref|ZP_08070263.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
 gi|322123987|gb|EFX95543.1| CBS domain protein [Streptococcus vestibularis ATCC 49124]
          Length = 219

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ +K    + V+ E  KL G+ITEG +                +  L
Sbjct: 14  VSPETTVAAATDIMRDKGLRRLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+ R 
Sbjct: 73  NKTKVGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDNDQ-ISGIITDKDVFRA 129



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  +T +  A  ++R   +  L V++   K +G++ 
Sbjct: 1   MAVKDFMTKRVVYVSPETTVAAATDIMRDKGLRRLPVIEHD-KLVGLIT 48



 Score = 43.7 bits (102), Expect = 0.035,   Method: Composition-based stats.
 Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+FR F
Sbjct: 88  VSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFRAF 130


>gi|268317569|ref|YP_003291288.1| putative signal transduction protein with CBS domains [Rhodothermus
           marinus DSM 4252]
 gi|262335103|gb|ACY48900.1| putative signal transduction protein with CBS domains [Rhodothermus
           marinus DSM 4252]
          Length = 144

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 5/124 (4%)

Query: 218 VCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +   DV+    +  + V    P+++A+  L E + G + VVD+  ++ G+ TE D+    
Sbjct: 1   MTVRDVLRGKPARVITVAADTPVLEAVKRLREHQIGAMPVVDDRARMIGLFTERDVVWRL 60

Query: 277 HKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +    +    V   M         D  +   M  +    I  L VV +  + IG++   
Sbjct: 61  AEKGAAILEEPVRYCMTSPVHFCKPDDSIRDVMWQMTYRRIRHLPVV-EDGRLIGMISIG 119

Query: 334 DLLR 337
           D+++
Sbjct: 120 DVVK 123


>gi|153834849|ref|ZP_01987516.1| mannose-1-phosphate guanyltransferase [Vibrio harveyi HY01]
 gi|148868720|gb|EDL67797.1| mannose-1-phosphate guanyltransferase [Vibrio harveyi HY01]
          Length = 352

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVED 287
              L++    +++A+ I++++      VVD  Q L G++T+GDI R   ++L  T  +  
Sbjct: 6   KNVLLEPSATILEALEIINKEALRVALVVDNEQHLVGVVTDGDIRRGLLRNLPLTDPIAM 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM  +P     +    V + L+    I  + ++++  + +G+    
Sbjct: 66  VMNTSPTTADVNAEREVLIDLMESKGILSIPLIEND-RVVGLETLQ 110



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
               +  A++++ +  + V +VVD+ Q  +G+V   D+ R G++
Sbjct: 12  PSATILEALEIINKEALRVALVVDNEQHLVGVVTDGDI-RRGLL 54


>gi|52080098|ref|YP_078889.1| YlbB protein [Bacillus licheniformis ATCC 14580]
 gi|319646127|ref|ZP_08000357.1| YlbB protein [Bacillus sp. BT1B_CT2]
 gi|52003309|gb|AAU23251.1| YlbB [Bacillus licheniformis ATCC 14580]
 gi|317391877|gb|EFV72674.1| YlbB protein [Bacillus sp. BT1B_CT2]
          Length = 148

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 50/121 (41%), Gaps = 6/121 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDI--F 273
                D+M        V     + +A   + +   G + VV D+G +L GI+T+ D+   
Sbjct: 1   MTRVKDIMTKETLYCTVLDN--VYEAAVKMKDGDVGAIPVVLDDGLELVGIVTDRDLVLR 58

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               K  N+  + +VM  +   + ED  +  A+ L+  + I  + V    +   GI+   
Sbjct: 59  GIAAKKPNSQKITNVMTTDLITVSEDDSIEKAVDLMGDYQIRRVPVT-RGKTLAGIITLG 117

Query: 334 D 334
           D
Sbjct: 118 D 118



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLLRFGI 340
             V+D+M K          +  A   ++  ++  + VV DD  + +GIV   DL+  GI
Sbjct: 2   TRVKDIMTKETLYCTVLDNVYEAAVKMKDGDVGAIPVVLDDGLELVGIVTDRDLVLRGI 60


>gi|220908306|ref|YP_002483617.1| chloride channel core [Cyanothece sp. PCC 7425]
 gi|219864917|gb|ACL45256.1| Chloride channel core [Cyanothece sp. PCC 7425]
          Length = 897

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
                +  AI    +       VV    +L G++T+ D+ R   + L+  L +  +M + 
Sbjct: 468 PADMTIAAAIQFFEQSHHRGFPVV-ADGRLVGMVTQSDLARVSVRGLSPDLPLSQIMTQR 526

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     L   + LL  + IS L V  + +K +GI+   D++R 
Sbjct: 527 LISVGPGDRLAHVLYLLNHYQISRLPVT-EGRKLVGIITRADIIRA 571



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D      + L  L   D+M +  + +  D  +  A+Q   Q +     VV    + +G+V
Sbjct: 442 DQKFAGDQQLQGLLAADIMQRRVETLPADMTIAAAIQFFEQSHHRGFPVV-ADGRLVGMV 500

Query: 331 HFLDLLRFGI 340
              DL R  +
Sbjct: 501 TQSDLARVSV 510


>gi|148244141|ref|YP_001220617.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH9]
 gi|150375709|ref|YP_001312306.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|147742270|gb|ABQ50513.1| hexulose-6-phosphate isomerase [Staphylococcus aureus subsp. aureus
           JH9]
 gi|149947697|gb|ABR53632.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
          Length = 183

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 9/162 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +F   V ++     R+ I G G+SG + +  A  L   G  +F + 
Sbjct: 12  LDELKGTLSHVKDEEFDGFVSEVTEAS-RIFIAGKGRSGFVANSFAMRLNQLGKQAFVIG 70

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I +DDL IV+S SGS++ L+ +   A+     ++ +T++  S +   AD
Sbjct: 71  ESTTP-----SIQKDDLFIVISGSGSTEHLRLLAEKAKSVDAKVVLLTTKLDSAIGEIAD 125

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLES 196
            V+ LP   +    G   P  S   Q      D++ I L+  
Sbjct: 126 TVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQ 167


>gi|329894378|ref|ZP_08270248.1| putative signal-transduction protein containing cAMP-binding [gamma
           proteobacterium IMCC3088]
 gi|328923174|gb|EGG30497.1| putative signal-transduction protein containing cAMP-binding [gamma
           proteobacterium IMCC3088]
          Length = 615

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMI 290
           V    P+     ++SE+R     +  EG+ L GI+T+ D+  R   K L+ L  +  +M 
Sbjct: 162 VAAATPIQHVAQLMSERRVSSAFIT-EGETLCGIVTDRDLRVRCVAKGLDVLEPISAIMT 220

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +PK +     +      + Q  +  + VV +    +G+V   DL+   
Sbjct: 221 TDPKTLNAQATIFDVTLAMTQLGVHHIPVVSEDC-LVGVVTTSDLMLAK 268


>gi|325478924|gb|EGC82032.1| putative 6-phospho 3-hexuloisomerase [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 177

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 71/187 (37%), Gaps = 20/187 (10%)

Query: 25  QCALRSIIAEKRGLSSLESSLQ-GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           Q     I  E      L  +L   ELS  F            R+ I G+G+S      L 
Sbjct: 4   QSYSELIEGEIYEFFKLNKNLDFEELSKYFKK--------DRRIFIGGVGRSSMAARGLV 55

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           + L   G  ++ +              +DD ++++S SG++  L A+    ++  + +++
Sbjct: 56  NRLVHLGYYAYLIGDISTPLA-----RKDDTVLLISNSGNTSSLYAVAERVKKDGVKILS 110

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSE 201
           ITS   S +   +D  L L    +S    + P  S   Q A+   DA  + L+   + + 
Sbjct: 111 ITSNKNSKIFEISDFSLILKGAEKS----VQPMGSLFEQAALLISDAFILFLMNLNSETS 166

Query: 202 NDFYVLH 208
                 H
Sbjct: 167 ESMRKRH 173


>gi|312880538|ref|ZP_07740338.1| Nucleotidyl transferase [Aminomonas paucivorans DSM 12260]
 gi|310783829|gb|EFQ24227.1| Nucleotidyl transferase [Aminomonas paucivorans DSM 12260]
          Length = 362

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LV     + DA++++         V D   KL G++T+GD+ R   + ++    V  VM 
Sbjct: 10  LVAPEATIRDALSVIDRNSQRMALVADPEGKLLGVVTDGDVRRGILRGVSLDAPVVRVMN 69

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             P+    +      ++ ++  ++  L+ VD+  +  GIV F D+
Sbjct: 70  PRPQRTRPEEPRFSQLRRMKDLDLPFLVQVDEEDRVAGIVRFADM 114


>gi|317497097|ref|ZP_07955424.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895642|gb|EFV17797.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 186

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 36/190 (18%), Positives = 78/190 (41%), Gaps = 15/190 (7%)

Query: 32  IAEKRGLSSLESSLQG---ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           ++E + + ++   L+G   ++  +   +VEK+     R+ + G G+SG      ++ L  
Sbjct: 1   MSEAKNIFAILDELKGNAKQIDNEGLESVEKLITEAKRIFVGGAGRSGFAARGFSNRLMH 60

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G   +FV            I   DL+I+ S SG++  L +    A+     +  +T   
Sbjct: 61  LGYTVYFVGEPTTP-----SIQEGDLLILGSGSGNTASLVSNAKKAKDQGAKVATLTMFP 115

Query: 149 KSVVACHADIVLTLP-KEPESCPHGL----APTTSAIMQLAI--GDALAIALLESRNFSE 201
           ++ +   AD ++ +P    +            + S+  +L+    DA+ + L+   N + 
Sbjct: 116 ENKIGSMADAIIKIPGVTEKCVDQNKGGSVQASGSSFEELSWITYDAMVMDLMRITNQNS 175

Query: 202 NDFYVLHPGG 211
            D +  H   
Sbjct: 176 EDLFKRHANM 185


>gi|261252187|ref|ZP_05944760.1| inosine-5'-monophosphate dehydrogenase [Vibrio orientalis CIP
           102891]
 gi|260935578|gb|EEX91567.1| inosine-5'-monophosphate dehydrogenase [Vibrio orientalis CIP
           102891]
          Length = 487

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAQMVHQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV +  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVSPDATIADVVALTEKHGFAGFPVVTDTNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVKEGATREEVQEKMHKARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|159896568|ref|YP_001542815.1| signal-transduction protein [Herpetosiphon aurantiacus ATCC 23779]
 gi|159889607|gb|ABX02687.1| putative signal-transduction protein with CBS domains
           [Herpetosiphon aurantiacus ATCC 23779]
          Length = 138

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 9/115 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-----TLSVED 287
            +    L +AIT+L   R   + VVD    L G+ ++ D    + + L+        V +
Sbjct: 18  CRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGAWSRGLDYERSMDSPVGE 77

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQK--AIGIVHFLDLLRF 338
            M ++    +    L+ A  LL  + I  L+VV++    +   IG++   D++R 
Sbjct: 78  FMTRDVITCMPHVDLSRAANLLTSNRIHRLVVVEERNDGRVWPIGVLSQTDIVRK 132



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 24/57 (42%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+V D M         +T L  A+ LL+ + I  L+VVD      G+    D L  
Sbjct: 4   QLTVGDTMNAEVISCRTETSLREAITLLQGNRIQALVVVDGPGSLAGVFSQTDALGA 60


>gi|323491640|ref|ZP_08096819.1| inosine 5'-monophosphate dehydrogenase [Vibrio brasiliensis LMG
           20546]
 gi|323314216|gb|EGA67301.1| inosine 5'-monophosphate dehydrogenase [Vibrio brasiliensis LMG
           20546]
          Length = 487

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +      +  + +  + V+      
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAQMVHQVKIYEAGVV---SHP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + D + +  +  F    VV +  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVSPDATIADVVALTEKHGFAGFPVVTDTNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLAAVKEGATREEVQEKMHKARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|302561236|ref|ZP_07313578.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302478854|gb|EFL41947.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
          Length = 142

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     L  A  ++ +   G + + DE ++L GI+T+ DI         D   
Sbjct: 8   MHRGAQWIPAHETLDRAAQLMRDLNVGALPISDENERLCGILTDRDIVVGCVAKGHDPAR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  ++    P+ I  D  +   +  ++ H I  L V+ + ++ +G++   DL +
Sbjct: 68  VTAGEMAKGTPRWIEADADIGDVLNEMQTHRIRRLPVI-EDKRLVGMISEADLAQ 121



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M +  + I     L  A QL+R  N+  L + D+ ++  GI+   D++
Sbjct: 2   TTAGDIMHRGAQWIPAHETLDRAAQLMRDLNVGALPISDENERLCGILTDRDIV 55



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +    +  +   ++    + D +  +   R   + V+ E ++L G+I+E D+ ++  +
Sbjct: 67  RVTAGEMAKGTPRWIEADADIGDVLNEMQTHRIRRLPVI-EDKRLVGMISEADLAQHLPE 125

Query: 279 DLNTLSVEDV 288
           D      E V
Sbjct: 126 DQIAAWAESV 135


>gi|283779970|ref|YP_003370725.1| signal transduction protein with CBS domains [Pirellula staleyi DSM
           6068]
 gi|283438423|gb|ADB16865.1| putative signal transduction protein with CBS domains [Pirellula
           staleyi DSM 6068]
          Length = 145

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 8/128 (6%)

Query: 218 VCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIF 273
           +   D++ +  S  L  + G  L   + +L     G + V +   + Q + GIITE D+ 
Sbjct: 1   MQVRDILQTKGSAVLTCQPGDTLARVVELLVRYNIGSLVVRESKADRQPMLGIITERDLL 60

Query: 274 RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R   +   TL    V D M ++P +      L  AM L+ +H I  L V+D  Q  +GI+
Sbjct: 61  RFAAEKRGTLENTFVADRMTRDPYICHASDELHHAMGLMTEHRIRHLPVIDGDQ-IVGII 119

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 120 SIGDIVKA 127



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 34/84 (40%), Gaps = 3/84 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D        +        +D         +      L  A+ +++E R   + V+D
Sbjct: 54  ITERDLLRFAAEKRGTLENTFVAD--RMTRDPYICHASDELHHAMGLMTEHRIRHLPVID 111

Query: 259 EGQKLKGIITEGDIFRNFHKDLNT 282
            G ++ GII+ GDI +  H +L+ 
Sbjct: 112 -GDQIVGIISIGDIVKAQHDELSR 134


>gi|225174906|ref|ZP_03728903.1| putative PAS/PAC sensor protein [Dethiobacter alkaliphilus AHT 1]
 gi|225169546|gb|EEG78343.1| putative PAS/PAC sensor protein [Dethiobacter alkaliphilus AHT 1]
          Length = 476

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 44/113 (38%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++P+V +   +      +  K+     V D   +L G+I+  D+ +   +     + 
Sbjct: 7   MVTNLPIVLVDQNMFTVAQEMMAKKTSHALVTDRENRLLGLISGYDLRKAVAEGNPECTA 66

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E +M       V   DT +     L+    I+ + VV D    +G ++   +L
Sbjct: 67  EQMMTPRQRLVVAYPDTPVEEVADLMSSRGITQVPVVSDE-VPVGYLNLNTVL 118



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +D+M+ N P V+++  + TVA +++     S  +V D   + +G++   DL + 
Sbjct: 3   AQDIMVTNLPIVLVDQNMFTVAQEMM-AKKTSHALVTDRENRLLGLISGYDLRKA 56



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 36/117 (30%), Gaps = 16/117 (13%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                 G     A  +M     + +     P+ +   ++S +    V VV   +   G  
Sbjct: 54  RKAVAEGNPECTAEQMMTPRQRLVVAYPDTPVEEVADLMSSRGITQVPVV-SDEVPVG-- 110

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                       LN  +V D   +   K   E   +  A  L+   +   L+VVD  
Sbjct: 111 -----------YLNLNTVLDYTTETVRKTRNELAQIRQAALLIESMS-EGLVVVDRD 155


>gi|171186269|ref|YP_001795188.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170935481|gb|ACB40742.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 139

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFH-KDLNT 282
           +     +V     + +A   +   R G + VVD+   +K  G+++E D+ +    K   T
Sbjct: 7   AAKPPVVVTPDATVEEAAEKMITHRVGLLVVVDKETRRKPIGVVSERDLLKAVAGKMPPT 66

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V+ V    N   +  D  +TVA + ++Q+N+  ++V+D   +  G++   DL+
Sbjct: 67  TTVDKVGTMGNYVYVYADDPITVAARKMKQNNVRHVVVLDRGGELYGVISIRDLI 121



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLLRF 338
            D+  K P V+  D  +  A + +  H + +L+VVD    +K IG+V   DLL+ 
Sbjct: 4   GDIAAKPPVVVTPDATVEEAAEKMITHRVGLLVVVDKETRRKPIGVVSERDLLKA 58


>gi|119471954|ref|ZP_01614239.1| hypothetical protein ATW7_12508 [Alteromonadales bacterium TW-7]
 gi|119445212|gb|EAW26503.1| hypothetical protein ATW7_12508 [Alteromonadales bacterium TW-7]
          Length = 631

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 23/147 (15%), Positives = 57/147 (38%), Gaps = 16/147 (10%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD------ 258
            ++               ++H       V     + +   +++++    V V D      
Sbjct: 137 AIVEQADGNDLTTAKVKSLLHRDVVT--VDATETVKNIAQLMTDESVSSVLVTDVNKPIN 194

Query: 259 -----EGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                +  ++ GIIT+ D+  +   + L        +M  N  ++ ++  +  A+  + +
Sbjct: 195 NDPQEDDGQVVGIITDKDLRTKVVAQGLEYNTPAHVIMSTNLVLLDQNDYIFEAVLAMLR 254

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N+  L VV   ++ IG++   D+LR+
Sbjct: 255 DNLHHLPVV-QKKRPIGVISLSDILRY 280



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 268 TEGDIF-------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           T+G++        +    DL T  V+ ++ ++   +     +    QL+   ++S ++V 
Sbjct: 128 TDGNVRLHQAIVEQADGNDLTTAKVKSLLHRDVVTVDATETVKNIAQLMTDESVSSVLVT 187

Query: 321 D-----------DCQKAIGIVHFLDLLRFGII 341
           D           D  + +GI+   DL R  ++
Sbjct: 188 DVNKPINNDPQEDDGQVVGIITDKDL-RTKVV 218


>gi|119719850|ref|YP_920345.1| signal transduction protein [Thermofilum pendens Hrk 5]
 gi|119524970|gb|ABL78342.1| putative signal transduction protein with CBS domains [Thermofilum
           pendens Hrk 5]
          Length = 307

 Score = 77.6 bits (190), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 47/113 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                     G  + +   ++  +    + VVDE   L+G+++   + + +        V
Sbjct: 177 MTPRPERATRGMSMREVARLIVSRNIRALPVVDEEGVLEGLVSAQHVSKAYADGRLDARV 236

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ED M ++   +  D  +   M+++ + N   ++VVD   +  GI+   D+L  
Sbjct: 237 EDYMDRDVATVEPDEDILRIMRIMVERNAGRVVVVDQSGRPQGIITRTDILMA 289



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 22/57 (38%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L   DVM   P+       +    +L+   NI  L VVD+     G+V    + + 
Sbjct: 170 RLRARDVMTPRPERATRGMSMREVARLIVSRNIRALPVVDEEGVLEGLVSAQHVSKA 226



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +    +  V+    ++  + I+ E+  G V VVD+  + +GIIT  DI     +
Sbjct: 239 YMDRDVATVEPDEDILRIMRIMVERNAGRVVVVDQSGRPQGIITRTDILMALTR 292


>gi|323488456|ref|ZP_08093703.1| hypothetical protein GPDM_03910 [Planococcus donghaensis MPA1U2]
 gi|323397963|gb|EGA90762.1| hypothetical protein GPDM_03910 [Planococcus donghaensis MPA1U2]
          Length = 439

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    +   D++   +    +    P+     +  E   G   V+D   KL GIIT  
Sbjct: 186 QLIKKEILLIEDILIPLEGTAHLHHKEPISRYHELNEETTHGGFPVIDHTNKLVGIITSR 245

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+  +   +L    VE VM K+P  +   T +  A   +    I ++ V DD  K  G++
Sbjct: 246 DVIGHSASEL----VEKVMTKDPLTVSMQTSVAAAGHRMIWEGIDLMPVADDHGKLKGVI 301

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 302 SRQDVLKA 309


>gi|330956985|gb|EGH57245.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. maculicola str. ES4326]
          Length = 644

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNT 282
           +     +     P+ +A+ ++ E++ G + +VDE Q   GI T  D+       H D  +
Sbjct: 183 AMRHPVMCSPETPMREAVKLMHEQQVGSIVIVDEQQSPLGIFTLRDLREAVADVHADF-S 241

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V   M   P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 242 APVRHTMSLAPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMREAVKLMHEQQVGSIVIVDEQQSPLGIFTLRDLREA 232


>gi|126726574|ref|ZP_01742415.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           HTCC2150]
 gi|126704437|gb|EBA03529.1| inosine-5'-monophosphate dehydrogenase [Rhodobacterales bacterium
           HTCC2150]
          Length = 484

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/164 (18%), Positives = 58/164 (35%), Gaps = 7/164 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD-VMHSGDSIP 231
             P  S+ M       +AIA+ ++        +      K  +        +     +  
Sbjct: 39  NVPLLSSAMDTVTEAKMAIAMAQAGGMG--VIHRNLDVDKQASEVRRVKRFISGIVYNPI 96

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
            ++    L DA  + +  R     V+DE  ++ GI+T  D+            V  +M  
Sbjct: 97  TLRANQTLADAQELQARYRVTGFPVIDENGRVLGIVTNRDMRFASDA---KTPVSAMMTS 153

Query: 292 NPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               ++ E   L  A  L++   I  L+V +D  +  G++   D
Sbjct: 154 EGLAMLQEPADLDEARSLMQARRIEKLLVTNDAGELTGLLTLKD 197



 Score = 46.4 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           NP  +  +  L  A +L  ++ ++   V+D+  + +GIV   D+
Sbjct: 94  NPITLRANQTLADAQELQARYRVTGFPVIDENGRVLGIVTNRDM 137


>gi|269960084|ref|ZP_06174461.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269835383|gb|EEZ89465.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 283

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 3/165 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNALSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++  D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSSQDVQIAISFSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRDIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
                       H  +   S   Q  I D L I L++ R+ S   
Sbjct: 227 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRDESARQ 269


>gi|30695978|ref|NP_849813.1| CLC-F (CHLORIDE CHANNEL F); ion channel/ voltage-gated chloride
           channel [Arabidopsis thaliana]
 gi|332195153|gb|AEE33274.1| chloride channel protein CLC-f [Arabidopsis thaliana]
          Length = 585

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 52/142 (36%), Gaps = 23/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL E    C+ VVD+   L GI+T GDI 
Sbjct: 413 ETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIR 472

Query: 274 RNFHK------DLNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLM 318
           R          D NT  V  V  K                D  + VA +L+    +  L 
Sbjct: 473 RYLSNNASTILDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLP 532

Query: 319 VVD--------DCQKAIGIVHF 332
           VV           +K +G++H+
Sbjct: 533 VVKRGEVIHKGKRRKLLGLLHY 554



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +   T L  A  +L++ + + +MVVDD     GI+   D+ R+
Sbjct: 416 LEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRY 474


>gi|121998461|ref|YP_001003248.1| inosine-5'-monophosphate dehydrogenase [Halorhodospira halophila
           SL1]
 gi|121589866|gb|ABM62446.1| inosine-5'-monophosphate dehydrogenase [Halorhodospira halophila
           SL1]
          Length = 514

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 40/204 (19%), Positives = 71/204 (34%), Gaps = 18/204 (8%)

Query: 143 AITSENKSVVACHADIV---LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           A+T ++  ++   + ++   + L            P  SA M       LAIAL E    
Sbjct: 33  ALTFDDVLLLPAESHVLPRDVDLSTPLTRRIQVNVPLVSAAMDTVTEARLAIALAEQGG- 91

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSG----DSIPLVKIGCPLIDAITILSEKRFGCVA 255
                 ++H    +         V             V     + + + +  +     V 
Sbjct: 92  ----MGIIHKNMTVEQQAAEVRRVKKFESGIIKEPITVSPFMTIGEVLKLTRQHGISGVP 147

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHN 313
           VVD GQ+L GI+T  D+     ++  +  V   M        + E       +  L QH 
Sbjct: 148 VVD-GQELVGIVTGRDLRF---ENRVSEPVSVAMTPKERLVTVREGAERDEVLSKLHQHR 203

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  ++VVDD     G++   D+ +
Sbjct: 204 IEKILVVDDAFHLRGMITVKDIQK 227


>gi|330979929|gb|EGH78227.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. aptata str. DSM 50252]
          Length = 644

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   GI T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGIFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDATAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +GI    DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGIFTLRDLREA 232


>gi|134299119|ref|YP_001112615.1| signal-transduction protein [Desulfotomaculum reducens MI-1]
 gi|134051819|gb|ABO49790.1| putative signal-transduction protein with CBS domains
           [Desulfotomaculum reducens MI-1]
          Length = 210

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 61/126 (48%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               S   +  G P++DA+  + + +   + V D+  +L G++TE ++            
Sbjct: 6   CMTTSPVTISKGTPILDALEKMKKLKIRQLPVTDK-GRLVGLVTERELLTVTPSPATTLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ + V +VM+K+P  +  +T +  A  ++R++ I  ++V+++ +  +GI+  
Sbjct: 65  IFEMNYLLSKMVVGEVMVKDPITVNPETTMEEAALIMRENKIGSMLVMEEDE-LVGIITQ 123

Query: 333 LDLLRF 338
            D+   
Sbjct: 124 TDIFDA 129



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M  +P  I + T +  A++ +++  I  L V D   + +G+V   +LL
Sbjct: 3   VKDCMTTSPVTISKGTPILDALEKMKKLKIRQLPVTDK-GRLVGLVTERELL 53



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +A  I+ E + G + V++E + L GIIT+ DIF  F +       
Sbjct: 81  MVKDPITVNPETTMEEAALIMRENKIGSMLVMEEDE-LVGIITQTDIFDAFIEFFGLRKA 139

Query: 286 E 286
            
Sbjct: 140 A 140


>gi|294667435|ref|ZP_06732652.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
 gi|292602768|gb|EFF46202.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 10535]
          Length = 119

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +I+AI +++EK  G V V+ EG +L GI++E D  R      +  +T SV ++M      
Sbjct: 1   MIEAIRLMAEKAVGAVLVM-EGPRLVGIVSERDYARKVVLRDRSSSTTSVAEIMSAEVVT 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 60  VSPSDTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 101



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 17/105 (16%), Positives = 38/105 (36%), Gaps = 4/105 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIP 231
           +      + + A+G  L +         SE D+                S        + 
Sbjct: 1   MIEAIRLMAEKAVGAVLVMEGPRLVGIVSERDYA--RKVVLRDRSSSTTSVAEIMSAEVV 58

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V     +   + ++++ RF  + VV E  +++G+I+ GD+ +  
Sbjct: 59  TVSPSDTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKAV 102


>gi|256811222|ref|YP_003128591.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
 gi|256794422|gb|ACV25091.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus fervens AG86]
          Length = 165

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 58/120 (48%), Gaps = 7/120 (5%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-- 280
           V+ +      +K      DA+ ++ +K      ++DE     GI+T  DI ++   +   
Sbjct: 7   VVVAMSEPLFIKSSLSAYDAMKMMIDKGRRYCILLDENNGPVGIVTITDIIKHILLERVP 66

Query: 281 -NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH---FLDLL 336
              + + ++  K    I  DT +  A+++++++ +S L +VD+  K +GIV     +D+L
Sbjct: 67  PENVKIYEIATKKLVTISPDTSIEEALKIMKKYGVSKLPIVDN-GKIVGIVTENELIDIL 125



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 22/50 (44%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V +  P  I        AM+++        +++D+    +GIV   D+++
Sbjct: 9   VAMSEPLFIKSSLSAYDAMKMMIDKGRRYCILLDENNGPVGIVTITDIIK 58



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                  +   +  +     + +A+ I+ +     + +VD   K+ GI+TE ++
Sbjct: 69  NVKIYEIATKKLVTISPDTSIEEALKIMKKYGVSKLPIVD-NGKIVGIVTENEL 121


>gi|268590887|ref|ZP_06125108.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291313677|gb|EFE54130.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 295

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 56/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q   AV  + +    V I G+G SG     L + L   G     V    
Sbjct: 121 LSETLNLLDMTQVQDAVNALLSS-NYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ I +S SG+S E    L  A+      IA+T    S +  +A+  L
Sbjct: 180 FMYMQASLLKPGDIAIGISHSGNSPETVHALKLAKEAGATTIALTHNLGSHIMEYANYYL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L+++
Sbjct: 240 INGNRQGKLQGDSI--GTKTAQLFVLDLLYTLLVQA 273


>gi|225412211|ref|ZP_03761400.1| hypothetical protein CLOSTASPAR_05433 [Clostridium asparagiforme
           DSM 15981]
 gi|225042274|gb|EEG52520.1| hypothetical protein CLOSTASPAR_05433 [Clostridium asparagiforme
           DSM 15981]
          Length = 285

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 72/183 (39%), Gaps = 7/183 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           + +S  Q A + + A  + L+   S L+ E   +F  A++ + A +  +   G+G S   
Sbjct: 93  LNDSFEQVAQKVLNANVQTLNETYSLLEEE---KFSKAMDLLNAAES-IYFFGVGGSMLT 148

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K  +           +           ++  +D+ ++ S+SG++ +   +   A++  
Sbjct: 149 AMKAMNKFLRIEPKVRCLPDTHMQAMAASVMGPEDVAVLFSYSGATKDTIHVAELAKQAG 208

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +I +T   KS +   +D+ L         P     T++ I Q+ + D +       R 
Sbjct: 209 ATVICVTRFVKSPLTSFSDVTLLSG--ANEGPFQSGSTSAEISQMFLIDLMYTEY-YRRY 265

Query: 199 FSE 201
           F  
Sbjct: 266 FKR 268


>gi|224369280|ref|YP_002603444.1| putative tRNA nucleotidyl transferase protein [Desulfobacterium
           autotrophicum HRM2]
 gi|223691997|gb|ACN15280.1| putative tRNA nucleotidyl transferase protein [Desulfobacterium
           autotrophicum HRM2]
          Length = 432

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 1/123 (0%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G               +  V     +      L E     + VVD+   + G+I+  D  
Sbjct: 302 GNQQTSVMLSDIMSYPVKTVNQNTEVGQVAMFLRELGCSGLPVVDDQDNMVGVISRRDFR 361

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +    +     V+  M ++   I  +     A +L+ +H+I  + V+D+  + IGIV   
Sbjct: 362 KIRKANHMRSPVKAFMSRDVVSITAERSAIDAARLMIRHDIGRIPVMDND-RIIGIVTRS 420

Query: 334 DLL 336
           D++
Sbjct: 421 DVM 423


>gi|153833559|ref|ZP_01986226.1| putative HTH-type transcriptional regulator YfhH [Vibrio harveyi
           HY01]
 gi|148870086|gb|EDL69033.1| putative HTH-type transcriptional regulator YfhH [Vibrio harveyi
           HY01]
          Length = 283

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/165 (21%), Positives = 62/165 (37%), Gaps = 3/165 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNALSYEACHQAVKWLSEAR-RVQVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++  D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSSQDVQIAISFSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRDIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
                       H  +   S   Q  I D L I L++ R+ S   
Sbjct: 227 TFDT--IANETEHRSSSIASRTAQNVITDLLFIILVQQRDESARQ 269


>gi|55822341|ref|YP_140782.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           CNRZ1066]
 gi|55738326|gb|AAV61967.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           CNRZ1066]
          Length = 139

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/118 (28%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ +K   C+ V+ E  KL G+ITEG +                +  L
Sbjct: 8   VSPETTVATAADIIRDKGLRCLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLL 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+   
Sbjct: 67  NKTKVGDIMIKNVLTVSKYASLEDAICIMLQNKVGVLPVVDNDQ-ISGIITDKDVFHA 123



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+F  F  +L   S
Sbjct: 82  VSKYASLEDAICIMLQNKVGVLPVVDND-QISGIITDKDVFHAFFGNLRIWS 132



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M K    +  +T +  A  ++R   +  L V++   K +G++ 
Sbjct: 1   MTKRVVNVSPETTVATAADIIRDKGLRCLPVIEHD-KLVGLIT 42


>gi|332652371|ref|ZP_08418116.1| transcriptional regulator [Ruminococcaceae bacterium D16]
 gi|332517517|gb|EGJ47120.1| transcriptional regulator [Ruminococcaceae bacterium D16]
          Length = 290

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/161 (21%), Positives = 76/161 (47%), Gaps = 3/161 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  +S+LE +++     Q   A E + + + RV+  G G S  +  +  +  ++  +   
Sbjct: 111 RENISALEQTVKLINGDQLRQAAELLHSAR-RVICMGQGSSMVLAEEAWTLFSTISSKFA 169

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F+  +      + +++++D+++  S+SGS+ EL+ +L  +R   + +I ++   KS    
Sbjct: 170 FISDSHFQLNSIALMSKEDVVLFFSYSGSTRELQDVLAVSRPMGVKVILVSRFPKSPGGQ 229

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            AD+VL         P  +   T+ + QL + D L   +  
Sbjct: 230 LADLVLQCG--SNEGPLQVGSVTARMAQLFVLDLLFTEVCN 268


>gi|153004477|ref|YP_001378802.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152028050|gb|ABS25818.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 431

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 48/127 (37%), Gaps = 23/127 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN------------ 281
           +   P+ + +  L  K +  V VV E +   GI+T  D+ R     +             
Sbjct: 135 REDAPIREVVEALLGKPYRAVLVV-EDEVPIGIVTSSDLARKGGLGMRLELVQSLDRPAL 193

Query: 282 ----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                     T    DVM + P  +     L    + + +  +  L VV+D  K +GIV 
Sbjct: 194 DGLRERLSRSTQVAGDVMTRPPVTVEAAAPLPEVAERMARLRLKRLPVVNDHGKLVGIVS 253

Query: 332 FLDLLRF 338
            +DLLR 
Sbjct: 254 RVDLLRA 260



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 28/141 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
                PLV+    L +    +   R     VVD   ++ G++T+ ++             
Sbjct: 287 MRRDFPLVRPDTALPEVFQAVIATRLNRALVVDAEHRVVGLVTDAELLERITPALRPGAL 346

Query: 277 -------------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                               +     +  D+M +   V  EDT ++ A+ L+ + N  VL
Sbjct: 347 RSLMSRLPFGHSDPEESATERHARARTAADLMTREVVVAREDTPVSEAIGLVLEGNHKVL 406

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V D   + +G V   DLL  
Sbjct: 407 AVTDASGRLLGAVDRADLLHA 427



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 45/119 (37%), Gaps = 13/119 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
                  V+   PL +    ++  R   + VV++  KL GI++  D+ R           
Sbjct: 211 MTRPPVTVEAAAPLPEVAERMARLRLKRLPVVNDHGKLVGIVSRVDLLRAAAGGFEGAPP 270

Query: 281 --------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                       +  VM ++  ++  DT L    Q +    ++  +VVD   + +G+V 
Sbjct: 271 AHRELGLARDTPLSRVMRRDFPLVRPDTALPEVFQAVIATRLNRALVVDAEHRVVGLVT 329



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 36/81 (44%), Gaps = 7/81 (8%)

Query: 265 GIIT--EGDIFRNFHKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           G+IT  + +I  +  + +      ++  DVM +      ED  +   ++ L       ++
Sbjct: 97  GLITVDDTEIVLHQPRPIRDVPAAMTAADVMSRGVLSTREDAPIREVVEALLGKPYRAVL 156

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VV+D    IGIV   DL R G
Sbjct: 157 VVEDE-VPIGIVTSSDLARKG 176


>gi|167949411|ref|ZP_02536485.1| hypothetical protein Epers_24153 [Endoriftia persephone
           'Hot96_1+Hot96_2']
          Length = 208

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 68/176 (38%), Gaps = 30/176 (17%)

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           +G+ + IA   S   +       +   +     +   D+M   ++   V     L++ ++
Sbjct: 27  VGNTIRIAYGLSHGETRE----NNQAYEEELFSMLVRDIM--TNAPKTVSPDAKLLEVVS 80

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----------------------HKDLNT 282
           ++   RF  + VV E  K+KGI+ E D+                          +KD+ T
Sbjct: 81  LMCLFRFSGLPVV-EDGKVKGIVAEKDVLHRMFPGLEDFKDGMVAPDYDSMLTQYKDVVT 139

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V DVM      +  D  +  A  ++ +H    + V  +  + +G++   D+ + 
Sbjct: 140 LKVADVMTSRVITVDPDMHILKAATVMIRHKFRRIPVA-EDGELLGMLSLGDIHKA 194


>gi|116049806|ref|YP_791387.1| CBS domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|115585027|gb|ABJ11042.1| putative CBS-domain-containing membrane protein [Pseudomonas
           aeruginosa UCBPP-PA14]
          Length = 385

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 52/136 (38%), Gaps = 9/136 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       +        +        + DA   L + R   + V+DE ++L GI+T+ D
Sbjct: 234 ALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQDHRLKALPVLDEHRRLAGIVTQSD 293

Query: 272 IFRNFHKD---------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           + ++F  D         L    ++ +M      +  DT     + LL    +  L V+++
Sbjct: 294 LLKHFRPDGSPFKRLRFLRGTKLKTIMTTPVVCVQADTHAVELVSLLSDEGLHCLPVLNE 353

Query: 323 CQKAIGIVHFLDLLRF 338
               +GIV   DL+  
Sbjct: 354 AGYLVGIVSQTDLIAA 369



 Score = 60.3 bits (145), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                + +  L+   +M ++ +    +T +  A + L+ H +  L V+D+ ++  GIV  
Sbjct: 232 RYALRRRMGELTAARIMSRDVQTASTETFIDDAWKQLQDHRLKALPVLDEHRRLAGIVTQ 291

Query: 333 LDLLR 337
            DLL+
Sbjct: 292 SDLLK 296



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/84 (16%), Positives = 39/84 (46%), Gaps = 5/84 (5%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           ++F  +      P  +L  L       + +   +  V+     ++ +++LS++   C+ V
Sbjct: 296 KHFRPDG----SPFKRLRFLRGTKLKTIMTTPVVC-VQADTHAVELVSLLSDEGLHCLPV 350

Query: 257 VDEGQKLKGIITEGDIFRNFHKDL 280
           ++E   L GI+++ D+    +++ 
Sbjct: 351 LNEAGYLVGIVSQTDLIAALYRNW 374


>gi|237654199|ref|YP_002890513.1| signal transduction protein with CBS domains [Thauera sp. MZ1T]
 gi|237625446|gb|ACR02136.1| putative signal transduction protein with CBS domains [Thauera sp.
           MZ1T]
          Length = 140

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 43/121 (35%), Gaps = 3/121 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +       +    +  +++    +  A   + E+  G V V D    LKGI T  D  + 
Sbjct: 1   MTNRNISFIVKDQNPLMLRPTDTVQTACRSMCERSVGAVLVTDARAHLKGIFTGRDAVQV 60

Query: 276 FHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                +   V   +VM   P  I  +     A+ ++       L VV    K +GIV   
Sbjct: 61  IANGGDPAKVQLSEVMTAKPDTIDPEHKAIDALHMMCDGGYRHLPVV-VDGKVVGIVSRS 119

Query: 334 D 334
           D
Sbjct: 120 D 120


>gi|134100026|ref|YP_001105687.1| CBS domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|291002982|ref|ZP_06560955.1| CBS domain-containing protein [Saccharopolyspora erythraea NRRL
           2338]
 gi|133912649|emb|CAM02762.1| CBS domain protein [Saccharopolyspora erythraea NRRL 2338]
          Length = 140

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 6/124 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-- 274
              A D+MH+G     V  G  L  A  ++ +   G + +     +L G+IT+ DI    
Sbjct: 1   MTTARDIMHAGAKC--VNEGESLQRAAQMMRDLNVGSLPICGNDDRLHGMITDRDIVVKC 58

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               KDL+ +   ++    P  +  D  L   + L+ QH I  L V+    + +G++   
Sbjct: 59  CAEGKDLSQVKAGELAQGTPHWVDADADLKQVLNLMEQHQIRRLPVI-ADHRLVGMISEA 117

Query: 334 DLLR 337
           DL R
Sbjct: 118 DLAR 121



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/75 (18%), Positives = 29/75 (38%), Gaps = 1/75 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G           +  +   V     L   + ++ + +   + V+    +L G+I+E D+ 
Sbjct: 62  GKDLSQVKAGELAQGTPHWVDADADLKQVLNLMEQHQIRRLPVI-ADHRLVGMISEADLA 120

Query: 274 RNFHKDLNTLSVEDV 288
           RN   +     VE+V
Sbjct: 121 RNLSDEQLAHFVENV 135


>gi|109156397|gb|ABG26348.1| hexulose-6-phosphate synthase and isomerase [Methylomonas sp. 16a]
          Length = 394

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 70/184 (38%), Gaps = 7/184 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A       +  + +  S +       +  A+ ++     R+ ++G G+SG IG   A  L
Sbjct: 212 AAAVXXXXRDLIVNKISGILEATPDSYDKALTELLDQAKRIFVSGAGRSGLIGRFFAMRL 271

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
             +G     V            I   DL+I++S SG +++L A    A+     +  I++
Sbjct: 272 MHSGYDVSVVGEIVTP-----SIKAGDLLIIISGSGETEQLIAFTKKAKEIGAKICLISA 326

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDF 204
           ++ S +   AD+ L + +  +       P  +      L   +A    ++  +   E + 
Sbjct: 327 KDDSTIGDMADVTLQIGRAEQYGKVKGMPMGTVFELSTLFFLEATISHVIHEKGIPEEEM 386

Query: 205 YVLH 208
              H
Sbjct: 387 RSRH 390


>gi|72163441|ref|YP_291098.1| hypothetical protein Tfu_3042 [Thermobifida fusca YX]
 gi|71917173|gb|AAZ57075.1| CBS [Thermobifida fusca YX]
          Length = 241

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/149 (16%), Positives = 49/149 (32%), Gaps = 32/149 (21%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------ 272
                + + +   +V         +  L   R   + VVDE  ++ G+++EGD+      
Sbjct: 4   TVVRDVMTAEPPSVV-ASTSFKTIVRTLINHRVSALPVVDEAGRVVGVVSEGDLLHKEEF 62

Query: 273 ----------FRNFHKDLNTLS---------------VEDVMIKNPKVILEDTLLTVAMQ 307
                            ++  S                + +M      +   T    A +
Sbjct: 63  IGGDDYSPPLRARLRARISGASGAGGANSAEKAAANRADQLMSHPAVTVSPGTSAARAAR 122

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +H +  L VV +    +G+V   DLL
Sbjct: 123 VMERHGVKQLPVVTEGDYLVGMVTRRDLL 151



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 30/57 (52%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++  V DVM   P  ++  T     ++ L  H +S L VVD+  + +G+V   DLL
Sbjct: 1   MDSTVVRDVMTAEPPSVVASTSFKTIVRTLINHRVSALPVVDEAGRVVGVVSEGDLL 57



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 21/74 (28%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G                      V  G     A  ++       + VV EG  L G++T 
Sbjct: 88  GANSAEKAAANRADQLMSHPAVTVSPGTSAARAARVMERHGVKQLPVVTEGDYLVGMVTR 147

Query: 270 GDIFRNFHKDLNTL 283
            D+   F +    L
Sbjct: 148 RDLLMVFLRSDEDL 161


>gi|227876910|ref|ZP_03995007.1| transcriptional regulator [Lactobacillus crispatus JV-V01]
 gi|256850195|ref|ZP_05555625.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
 gi|227863500|gb|EEJ70922.1| transcriptional regulator [Lactobacillus crispatus JV-V01]
 gi|256713167|gb|EEU28158.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
          Length = 281

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF--------QFHCA 56
           F  F+    +     +++ V   + +       L  L+ SL   ++             A
Sbjct: 64  FKDFQIACAQEMPNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKSLDAA 123

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +++ + ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++I
Sbjct: 124 VDLMRSAQ-QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILI 182

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           V S+SG + E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G  
Sbjct: 183 VFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGAI 240


>gi|217966001|ref|YP_002351679.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes HCC23]
 gi|290891977|ref|ZP_06554974.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J2-071]
 gi|217335271|gb|ACK41065.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes HCC23]
 gi|290558571|gb|EFD92088.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J2-071]
 gi|307572383|emb|CAR85562.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes L99]
          Length = 268

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 66/152 (43%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+A K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREIVQYIQAAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ +N
Sbjct: 224 SKHYFANSQFSIMYVMDIISMMLLQNESYRDN 255


>gi|330507964|ref|YP_004384392.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928772|gb|AEB68574.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 305

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 55/127 (43%), Gaps = 3/127 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           G +F   +  +    S  L+       L D + ++ EK  G + +VDE  ++KGIITE D
Sbjct: 96  GNIFTAINADIREIMSSKLIYASENTSLHDVLKLMYEKNVGGLPIVDEDSRIKGIITEED 155

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             R+       L VE  M  N       T +    +++ Q     + VV      +G+V 
Sbjct: 156 FVRSCRGVDTGLVVESFMSPNVVTAPAQTTIEKMTRMIIQKGFRRMPVV-QDGVLMGMVT 214

Query: 332 FLDLLRF 338
             D++++
Sbjct: 215 ASDIMKY 221



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 52/141 (36%), Gaps = 17/141 (12%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDI 272
                 +  +  +   +  V     ++ AI  ++   F  + + D G ++L G +T  D+
Sbjct: 18  RHAKHISEVLSAASPDVVTVPPTTTIMGAIKTMTFYGFSRLPIADAGTKRLLGFVTSVDV 77

Query: 273 FRNFHKDLN----------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                  L                    + ++M        E+T L   ++L+ + N+  
Sbjct: 78  VDFLGGGLRHNLLQEKYQGNIFTAINADIREIMSSKLIYASENTSLHDVLKLMYEKNVGG 137

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L +VD+  +  GI+   D +R
Sbjct: 138 LPIVDEDSRIKGIITEEDFVR 158



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 20/153 (13%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E DF     G   G +            ++        +     ++ +K F  + VV 
Sbjct: 151 ITEEDFVRSCRGVDTGLVVE-----SFMSPNVVTAPAQTTIEKMTRMIIQKGFRRMPVV- 204

Query: 259 EGQKLKGIITEGDIFRNFHKD-----LNTLSVEDVMI--------KNPKVILEDTLLTVA 305
           +   L G++T  DI +          + T  + +VM         ++   I +   L  A
Sbjct: 205 QDGVLMGMVTASDIMKYLGSGDAFEKVVTGDIGEVMNQPIKSLIKRSLITIEKKMDLGHA 264

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +  + I  + V+D      GI+   D +R 
Sbjct: 265 ARKMMDNEIGSMPVMD-RGSLAGILTERDFVRA 296


>gi|227510003|ref|ZP_03940052.1| RpiR family transcriptional regulator [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227190609|gb|EEI70676.1| RpiR family transcriptional regulator [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 281

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 7/184 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N T+      I    +   +L+ + +G    +F  +V +I   + R+   G+G S     
Sbjct: 90  NDTLSTIADKIFTSSQ--RALQDTREGIDENEFARSVLRIIHCR-RLGFFGLGGSSVAAL 146

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                   T    F+    +        +  DD  IV+S SG + +   I    +R  +P
Sbjct: 147 DGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVVSHSGKNRQTIKIAETLKRRKVP 206

Query: 141 LIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           +IAITS   S +  H+DI  ++   E      G+    S + QL I D L +        
Sbjct: 207 VIAITSYQDSPLVGHSDITFISSSDESNYRSEGM---YSLLAQLTIIDTLFMMATVRMGP 263

Query: 200 SEND 203
           +  D
Sbjct: 264 ATED 267


>gi|144898525|emb|CAM75389.1| signal-transduction protein containing cAMP-binding and CBS domains
           [Magnetospirillum gryphiswaldense MSR-1]
          Length = 479

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIK 291
               L DAI  + E R   +  VD   +  GI+TE D+ R            ++  +M +
Sbjct: 32  EDLSLTDAIHRMYEARASSIVGVDGQGRAIGILTERDLLRLLSTQGAAGLDTTLGQIMTR 91

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +  D  + VA+  + +  +  L+VVD  +K +G+V    LL+
Sbjct: 92  PVAAVPSDAFVYVALGKMTRLGLRHLVVVDRDRKPLGMVTGRALLK 137



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 27/52 (51%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +VM +      ED  LT A+  + +   S ++ VD   +AIGI+   DLLR 
Sbjct: 21  EVMSRPVLTGTEDLSLTDAIHRMYEARASSIVGVDGQGRAIGILTERDLLRL 72


>gi|156743854|ref|YP_001433983.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235182|gb|ABU59965.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Roseiflexus castenholzii DSM
           13941]
          Length = 623

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 13/115 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAV-------VDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
           V     + +A   + E +   + V       +D G    GI+T+ D+  R   + L +  
Sbjct: 165 VAPDTTVREAARRMREAQASALIVDLPPYGMLDAGS---GIVTDRDLRNRVVAEGLDHQT 221

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  VM      +  D+L+   +  + +H +  L  + D  + IG+V + D LR 
Sbjct: 222 PIAQVMTAPAITVPADSLVFEGLLKMIEHGVHHLP-LSDGGQIIGVVSYRDFLRL 275


>gi|289804781|ref|ZP_06535410.1| D-arabinose 5-phosphate isomerase [Salmonella enterica subsp.
          enterica serovar Typhi str. AG3]
          Length = 75

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/79 (39%), Positives = 46/79 (58%), Gaps = 4/79 (5%)

Query: 19 MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
          M ++ +    ++++ E +      S L   L   F  A   I   +G+V+++GIGKSGHI
Sbjct: 1  MSDALLNAGRQTLMLELQE----ASRLPERLGDDFVRAANIIIHCEGKVIVSGIGKSGHI 56

Query: 79 GSKLASTLASTGTPSFFVH 97
          G K+A+TLASTGTP FF  
Sbjct: 57 GKKIAATLASTGTPVFFCS 75


>gi|83954348|ref|ZP_00963068.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
 gi|83841385|gb|EAP80555.1| Protein containing a CBS domain [Sulfitobacter sp. NAS-14.1]
          Length = 144

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
             + DS+  VK G  +  A  +LSEKR G + V  +G+   GI++E DI R   +     
Sbjct: 9   TKADDSVTTVKPGTRISQAAAMLSEKRIGTLVVSADGKTPDGILSERDIVRTLGREGGGC 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +VE +M ++     +D      +  + Q     + V+      IG++   D+++  +
Sbjct: 69  LDDTVEALMTRDLITCAKDETADDILAKMTQGRFRHMPVL-QDGVLIGLISLGDVVKARL 127

Query: 341 I 341
           +
Sbjct: 128 M 128


>gi|256843747|ref|ZP_05549235.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
 gi|256615167|gb|EEU20368.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
          Length = 281

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF--------QFHCA 56
           F  F+    +     +++ V   + +       L  L+ SL   ++             A
Sbjct: 64  FKDFQIACAQEMPNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKSLDAA 123

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +++ + ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++I
Sbjct: 124 VDLMRSAQ-QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILI 182

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           V S+SG + E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G  
Sbjct: 183 VFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGAI 240


>gi|323701708|ref|ZP_08113379.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum nigrificans DSM 574]
 gi|323533244|gb|EGB23112.1| putative signal transduction protein with CBS domains
           [Desulfotomaculum nigrificans DSM 574]
          Length = 148

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 32/132 (24%), Positives = 52/132 (39%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
           V     + +   IL++ +   V VVDE  KL GI+TEGD+                    
Sbjct: 14  VTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLLHKEANPRIPKFVGILGGIL 73

Query: 278 ------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                       K L  L   ++M      + +DT +     L+ ++NI  + V  +  K
Sbjct: 74  YFGGVDQYKDDFKKLAALKASEIMTSKVITVSKDTDVGTIATLMLENNIKRIPVT-ESGK 132

Query: 326 AIGIVHFLDLLR 337
            IGIV   D+++
Sbjct: 133 VIGIVSRADIIK 144



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M  N   + +DT +    Q+L  + IS + VVD+  K +GIV   DLL
Sbjct: 1   MQAKDIMQTNVISVTKDTTIKEIAQILTDNKISGVPVVDEAGKLVGIVTEGDLL 54


>gi|320104187|ref|YP_004179778.1| inosine-5'-monophosphate dehydrogenase [Isosphaera pallida ATCC
           43644]
 gi|319751469|gb|ADV63229.1| inosine-5'-monophosphate dehydrogenase [Isosphaera pallida ATCC
           43644]
          Length = 509

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 43/168 (25%), Positives = 67/168 (39%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +          ++H    +       + V  S + I +
Sbjct: 42  NVPLLSAPMDTVTEADLAIALAQEGGLG-----IIHKNLSIEAQNREVAKVKRSENGIIV 96

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     +  A  I+       V +V  G KLKGI+T  D+      D     V+DV
Sbjct: 97  DPITLPPTATVAQAREIMRTHNISGVPIV-LGGKLKGILTRRDLRFLEQGD---TLVQDV 152

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +N  V  E T L  A ++L  + +  L++VD+     G+V   D+
Sbjct: 153 MTSENLVVAPEGTTLQEADRILMSNKVEKLLLVDEEFHLRGLVTIKDI 200


>gi|255017273|ref|ZP_05289399.1| hypothetical protein LmonF_04908 [Listeria monocytogenes FSL
           F2-515]
          Length = 268

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 3/152 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMXIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++D +I +S SG++ EL   L  A++    +   TS   S +   +D+   +P       
Sbjct: 166 KEDFVIGISNSGNTPELVTALKNAKKNKSKVATFTSFENSEMTEISDVT--IPVYNTLFV 223

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
                  S    + + D +++ LL++ ++ +N
Sbjct: 224 SKRYFANSQFSIMYVMDIISMMLLQNESYRDN 255


>gi|257784637|ref|YP_003179854.1| inosine 5-monophosphate dehydrogenase [Atopobium parvulum DSM
           20469]
 gi|257473144|gb|ACV51263.1| IMP dehydrogenase [Atopobium parvulum DSM 20469]
          Length = 507

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 65/176 (36%), Gaps = 12/176 (6%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDV 223
            +S      P  SA+MQ   G  LAIAL +     F             +  +    +  
Sbjct: 44  EKSAIELNIPMVSAVMQSVSGPRLAIALAQQGGIAFIYGSQSAEDEAQMVREVKSYKAGF 103

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDL 280
           + S  ++        L D + +  +     + V D+G    KL GI+T  D   +  +D 
Sbjct: 104 VVSDSTLT---PEMTLGDVLDLKEKSGHSTMPVTDDGTSRGKLVGIVTSRDYRPS--RDD 158

Query: 281 NTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  V + M          EDT L  A  ++  + ++ L +VD     + +V   D
Sbjct: 159 RSKLVSEFMTPADKLITAPEDTSLKEANDIIWDNKLNALPIVDKNGHLVSLVFRKD 214


>gi|254429177|ref|ZP_05042884.1| inosine-5'-monophosphate dehydrogenase [Alcanivorax sp. DG881]
 gi|196195346|gb|EDX90305.1| inosine-5'-monophosphate dehydrogenase [Alcanivorax sp. DG881]
          Length = 477

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 56/175 (32%), Gaps = 17/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAI + +          +LH              V         
Sbjct: 25  NIPLVSAAMDTVTEHRLAITMAQEGGVG-----ILHKSMDTEDQARNVRMVKKYESGVVK 79

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
               V     + + I I        V VV++     K+ GI+T  D     + D     V
Sbjct: 80  DPITVSPDTTVAELIRITDANNISGVPVVEKNGEGDKVVGIVTSRDTRFITNYD---QCV 136

Query: 286 EDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M        + E         LL +H I  ++VV++     G++   D+ + 
Sbjct: 137 KDIMTGKDRLVTVQEGVGADEVQALLHKHRIEKVIVVNEAGDLRGMITVKDIEKA 191


>gi|52785472|ref|YP_091301.1| YlbB [Bacillus licheniformis ATCC 14580]
 gi|52347974|gb|AAU40608.1| YlbB [Bacillus licheniformis ATCC 14580]
          Length = 141

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + VV D+G +L GI+T+ D+       K  N+  + +VM  +   
Sbjct: 14  VYEAAVKMKDGDVGAIPVVLDDGLELVGIVTDRDLVLRGIAAKKPNSQKITNVMTTDLIT 73

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + ED  +  A+ L+  + I  + V    +   GI+   D
Sbjct: 74  VSEDDSIEKAVDLMGDYQIRRVPVT-RGKTLAGIITLGD 111


>gi|228996042|ref|ZP_04155695.1| CBS domain protein [Bacillus mycoides Rock3-17]
 gi|229003658|ref|ZP_04161471.1| CBS domain protein [Bacillus mycoides Rock1-4]
 gi|228757593|gb|EEM06825.1| CBS domain protein [Bacillus mycoides Rock1-4]
 gi|228763707|gb|EEM12601.1| CBS domain protein [Bacillus mycoides Rock3-17]
          Length = 139

 Score = 77.6 bits (190), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + +V E  ++ G++T+ D+       K   + 
Sbjct: 8   MSTDIVQCTPLDNVYEAAVKMKEEAIGMIPIV-ENNQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM      +  D  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTEIVSVSPDDPIENATELMAQHQIRRLPVV-ENGELVGMLALGDL 117



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M  +         +  A   +++  I ++ +V +  + +G+V   DL+  GI
Sbjct: 2   TTVREFMSTDIVQCTPLDNVYEAAVKMKEEAIGMIPIV-ENNQVVGLVTDRDLVVRGI 58


>gi|254507915|ref|ZP_05120044.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus 16]
 gi|219549151|gb|EED26147.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus 16]
          Length = 629

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDL 280
           P V     + +A   ++++    + ++D         +   L GIIT+ D+  R   + L
Sbjct: 161 PFVIKTESIQNAAIKMADENVSSLLIIDPDVLEDDEDDNNPLVGIITDRDLCTRVLAQGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L V+   +K IGI+   D++R+
Sbjct: 221 DPNDEVSSVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KDKKPIGIIEATDIVRY 278


>gi|150400679|ref|YP_001324445.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013382|gb|ABR55833.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 155

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/151 (15%), Positives = 53/151 (35%), Gaps = 35/151 (23%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---- 277
            V        L+     + DAI +          V+++     G+++E DI +       
Sbjct: 4   TVKSIMKKPILLNENDNISDAIELFKTHNISGAPVINDDNYFVGVVSEEDIIKTLTTHNE 63

Query: 278 ------------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
                                         ++     V+++M+K+   I  DT +  A +
Sbjct: 64  DINILLPSPFDLLELPLKTTLKLEEYRKDIENAMKTKVKEIMVKDVITITPDTTINEASK 123

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ ++ +  L +V +  + +GIV   D+L  
Sbjct: 124 IMVKNKVKRLPIV-ENGELVGIVTRHDILEA 153



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T +V+ +M K P ++ E+  ++ A++L + HNIS   V++D    +G+V   D+++
Sbjct: 2   TTTVKSIM-KKPILLNENDNISDAIELFKTHNISGAPVINDDNYFVGVVSEEDIIK 56



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 22/62 (35%), Gaps = 1/62 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           +  +     + +A  I+ + +   + +V E  +L GI+T  DI  
Sbjct: 94  ENAMKTKVKEIMVKDVITITPDTTINEASKIMVKNKVKRLPIV-ENGELVGIVTRHDILE 152

Query: 275 NF 276
             
Sbjct: 153 AL 154


>gi|89097960|ref|ZP_01170847.1| YbbH [Bacillus sp. NRRL B-14911]
 gi|89087462|gb|EAR66576.1| YbbH [Bacillus sp. NRRL B-14911]
          Length = 292

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 66/174 (37%), Gaps = 16/174 (9%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++++Q    +       LS+           +   AVE I+  +  V   G+G S  I
Sbjct: 102 MSSNSIQTIRET----ADLLSA----------EELSKAVEAIQKAET-VHFFGVGASSII 146

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                         +        +   +  +  DD++  +S+SG + E+  IL  A +  
Sbjct: 147 AQDAQQKFLRINKHATAFADIHMTATLVANVKPDDVVFGISFSGKTFEVAKILELANKRG 206

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              I++T    S+V+  ADI L      +        T+S I QL + D L + 
Sbjct: 207 AVTISLTKYGSSLVSDQADIRLFTS-STKEPTFRSGATSSRIAQLHVIDILFMC 259


>gi|288931844|ref|YP_003435904.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288894092|gb|ADC65629.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 693

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 1/121 (0%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            + +        ++     + DAI ++ +   G + VVDE  KL  + +E D F+     
Sbjct: 573 RTRLRDVAKEPIVINHNEKIGDAIRLMIQNDIGFLPVVDEAGKLVAVFSERDAFKAIANG 632

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    + D   KNP+ +  D  ++   +++ + NI  ++ VD   + + +    D+L  
Sbjct: 633 ASLDSPLIDYATKNPQTVSCDDPVSKVAEIMVRLNIRHIVGVDSAGRPVCVAGVKDILAV 692

Query: 339 G 339
           G
Sbjct: 693 G 693



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 44/114 (38%), Gaps = 16/114 (14%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-----DLNTLSVE---- 286
             PL + +  +       + V     ++ G+I   D+     +      L    +     
Sbjct: 520 NEPLPNILETMEHYHVRMIPVC-RRGQIIGMI---DLRDVLAETAGLSALTKKPIAERTR 575

Query: 287 --DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             DV  K P VI  +  +  A++L+ Q++I  L VVD+  K + +    D  + 
Sbjct: 576 LRDVA-KEPIVINHNEKIGDAIRLMIQNDIGFLPVVDEAGKLVAVFSERDAFKA 628


>gi|294812311|ref|ZP_06770954.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294324910|gb|EFG06553.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 188

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +      A D+MH+G     +     L  A  ++ E   G + + D  ++L GI+T+ DI
Sbjct: 46  VRPTMTTAKDIMHAG--AQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDI 103

Query: 273 F---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                    D + ++  D+    P+ I   + +   +Q +  H I  L V+ + ++ +G+
Sbjct: 104 VVGCVAVGHDPSKVTAGDLARGTPRWIDAGSGVEDVLQEMEGHQIRRLPVI-ENKRLVGM 162

Query: 330 VHFLDLLR 337
           +   DL R
Sbjct: 163 ISEADLAR 170



 Score = 36.0 bits (82), Expect = 8.8,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +  +   +  G  + D +  +   +   + V+ E ++L G+I+E D+ R+ 
Sbjct: 123 ARGTPRWIDAGSGVEDVLQEMEGHQIRRLPVI-ENKRLVGMISEADLARHL 172


>gi|261250346|ref|ZP_05942922.1| transcriptional regulator RpiR family [Vibrio orientalis CIP
           102891]
 gi|260939462|gb|EEX95448.1| transcriptional regulator RpiR family [Vibrio orientalis CIP
           102891]
          Length = 282

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/157 (23%), Positives = 66/157 (42%), Gaps = 3/157 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           SLE ++          A E +     ++ I+G+G S  +   L+  L   G      H A
Sbjct: 109 SLERTVALNDDVNIQSATELLHNAS-KIQISGVGASSLVAKDLSYKLMKIGHAVHCEHDA 167

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                +   +  +D+++ LS+SG S E+  +   A+     +I I+    + +  +ADI 
Sbjct: 168 HIQVANASALNENDVLVALSYSGRSREILRVAQIAKGRKAKVITISQLAPTPLDKYADIK 227

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           L    + E      +  T+   QL + D L IAL + 
Sbjct: 228 LMTAADEE--QIRSSSITARDSQLLMTDLLFIALTQQ 262


>gi|239637743|ref|ZP_04678711.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus warneri L37603]
 gi|239596702|gb|EEQ79231.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus warneri L37603]
          Length = 290

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 75/202 (37%), Gaps = 4/202 (1%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
                 K  T     L+ N +     +      R   +L ++ +           ++ K 
Sbjct: 71  LSKYLPKETTVYNVELVDNESTASLKK--KMHSRAKGALNNANEALNDKTIDRICDQFKQ 128

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
              R+ I G G S  + + L   L+  G     V         L      D ++ ++ +G
Sbjct: 129 S-NRIFIYGYGASFVVATDLYQKLSRIGMNVQLVQETHIFTTMLASCNSRDCVVFITNNG 187

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
              E++AI      + IP+I ITS +K++++  +DIVL    + +     +  TTS   Q
Sbjct: 188 MQSEMQAIAKVVVDYHIPIITITSSSKNIISQMSDIVLDYG-QSDENEMRMGATTSLFAQ 246

Query: 183 LAIGDALAIALLESRNFSENDF 204
           +   D L    +     S  DF
Sbjct: 247 MFTIDILYYRYIALNYQSSLDF 268


>gi|227512938|ref|ZP_03942987.1| RpiR family transcriptional regulator [Lactobacillus buchneri ATCC
           11577]
 gi|227523066|ref|ZP_03953115.1| RpiR family transcriptional regulator [Lactobacillus hilgardii ATCC
           8290]
 gi|227083938|gb|EEI19250.1| RpiR family transcriptional regulator [Lactobacillus buchneri ATCC
           11577]
 gi|227089884|gb|EEI25196.1| RpiR family transcriptional regulator [Lactobacillus hilgardii ATCC
           8290]
          Length = 275

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 7/184 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N T+      I    +   +L+ + +G    +F  +V +I     R+   G+G S  +  
Sbjct: 84  NDTLSTIADKIFTSSQ--RALQDTREGIDENEFARSVLRIIHCH-RLGFFGLGGSSVVAL 140

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                   T    F+    +        +  DD  IV+S SG + +   I    +R  +P
Sbjct: 141 DGYHKFLRTSIDCFYYPDFDVQLMQAVKLGEDDCAIVVSHSGKNRQTIKIAETLKRRRVP 200

Query: 141 LIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           +IAITS   S +  H+DI  ++   E      G+    S + QL I D L +        
Sbjct: 201 VIAITSYQDSPLVGHSDITFISSSDESNYRSEGM---YSLLAQLTIIDTLFMMATVRMGP 257

Query: 200 SEND 203
           +  D
Sbjct: 258 ATED 261


>gi|220906813|ref|YP_002482124.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
 gi|219863424|gb|ACL43763.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
          Length = 1977

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 26/129 (20%)

Query: 232 LVKIGCPLIDAITILSEKRF-------------------GCVAVVDEGQKLKGIITEGDI 272
           +V     +IDAI  +S  +                     CV +V    +L GI T  D+
Sbjct: 17  IVLPETTVIDAIAQMSRAQITGSALSITATNEVHQPAHSSCVLIV-ADCQLIGIFTAADV 75

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILED---TLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            R     +    L + +VM  +P + L     T L+VA+ LL+QH I  L +VD     +
Sbjct: 76  LRLIVQQRLQEGLLIREVMT-HPVITLPGVAFTDLSVAINLLQQHRIRHLPLVDSANYPV 134

Query: 328 GIVHFLDLL 336
           G++ +  LL
Sbjct: 135 GLLTYETLL 143


>gi|91783939|ref|YP_559145.1| hypothetical protein Bxe_A1873 [Burkholderia xenovorans LB400]
 gi|91687893|gb|ABE31093.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
          Length = 229

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 43/130 (33%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     + +   I  +       V+D    + G+I+EGD+ R      +           
Sbjct: 14  VTPDMTVREVARIFVDNGISGAPVLDPEGHIAGMISEGDLLRRTEIGTDERKPSSWLDVW 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                         + V DVM  +   +  DT L     +L    I  + V     + +G
Sbjct: 74  SASHEARDYIKTHAVKVRDVMTPDVVTVQPDTPLGEVASILETRRIKRVPVT-QAGRVVG 132

Query: 329 IVHFLDLLRF 338
           IV   +L++ 
Sbjct: 133 IVSRANLVQA 142



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVMI N   +  D  +    ++   + IS   V+D      G++   DLLR
Sbjct: 1   MRASDVMITNVISVTPDMTVREVARIFVDNGISGAPVLDPEGHIAGMISEGDLLR 55


>gi|70725741|ref|YP_252655.1| hypothetical protein SH0740 [Staphylococcus haemolyticus JCSC1435]
 gi|68446465|dbj|BAE04049.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 290

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/196 (22%), Positives = 74/196 (37%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K        L+ N +V    + +    R   +L  S     +       +  K     + 
Sbjct: 77  KQQAPYKIELLNNESVDTLKKKLY--HRAEEALLKSSTFADNTTIDNICQHFKRA-NNIF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S    + L   L+  G     V         L    ++D ++ ++ +G   EL+
Sbjct: 134 IFGYGASYVCATDLYQKLSRIGLNVQLVQETHLFTTMLSTHDKEDCVLFITNNGDQSELR 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           A++     ++IP+I I+S   + VA H+DIVLT     +     +  TTS   Q+   D 
Sbjct: 194 AMVKVVSDYNIPIITISSSEHNHVAQHSDIVLTYGH-SDENELRMGATTSLFAQMFTIDV 252

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 253 LFYRYIALNYESSLDF 268


>gi|304322067|ref|YP_003855710.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
           HTCC2503]
 gi|303300969|gb|ADM10568.1| hypothetical protein PB2503_12654 [Parvularcula bermudensis
           HTCC2503]
          Length = 144

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 4/124 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 +   G  +  +     L +AI +L+ K  G V V   G+ + GI++E D+ R  
Sbjct: 1   MRAKDMLKDKGRDVVTIDHKASLAEAIEVLASKNIGAVVVTSPGKAVAGILSERDVVRVL 60

Query: 277 HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      V D+M +       +  +   + L+    I  + +VD     +G++   
Sbjct: 61  SGAPTGFRESPVTDIMTREVFTAGLEASVDQLLDLMTDRRIRHVPIVDGDG-LVGLLSIG 119

Query: 334 DLLR 337
           D+++
Sbjct: 120 DVVK 123


>gi|298291193|ref|YP_003693132.1| hypothetical protein Snov_1194 [Starkeya novella DSM 506]
 gi|296927704|gb|ADH88513.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
          Length = 228

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 25/129 (19%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------- 279
           K    ++     L E+R   + +VD+  K+ GI++EGD+ R                   
Sbjct: 15  KTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIRRAEAGTERRRSWWLQAFVD 74

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                      +  +  DVM ++P     DT L     L+  H +  + +V+     +GI
Sbjct: 75  DGTLAAEYVKAHGRTAADVMHRDPVTAGPDTPLHEIAALMESHGVKRIPIVEK-GHLVGI 133

Query: 330 VHFLDLLRF 338
           V   +L++ 
Sbjct: 134 VSRSNLIQA 142



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM           L+    + L +  IS + +VDD  K +GIV   DL+R
Sbjct: 1   MKARDVMTSPVITAKTTDLVVQIAKTLLERRISGMPIVDDKGKMVGIVSEGDLIR 55


>gi|167827983|ref|ZP_02459454.1| HPP family protein [Burkholderia pseudomallei 9]
          Length = 201

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 34/66 (51%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  ++M + P  I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 45  LRAYARTFDELSCAEIMSRRPISIAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTR 104

Query: 333 LDLLRF 338
            DL + 
Sbjct: 105 ADLSKA 110



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLN---- 281
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F ++L+    
Sbjct: 68  IAPDTPLPAAMTLLERHRIKALPVVDADARVVGIVTRADLSKAAPYATPGFLRNLSARLP 127

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD   +  GIV   DL
Sbjct: 128 RSLVGPAFVARAVMSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADL 187

Query: 336 LRFGI 340
           +  G+
Sbjct: 188 I-AGL 191



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V+   P+ + + + ++     + VVD   +L GI+T+ D+    ++
Sbjct: 141 MSTRVHAVRTTTPIAELVPLFADHGHHHIPVVDADHQLAGIVTQADLIAGLYR 193


>gi|160901997|ref|YP_001567578.1| RpiR family transcriptional regulator [Petrotoga mobilis SJ95]
 gi|160359641|gb|ABX31255.1| transcriptional regulator, RpiR family [Petrotoga mobilis SJ95]
          Length = 283

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/180 (24%), Positives = 76/180 (42%), Gaps = 5/180 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           K  ++ KN + Q  LR +      L S+ES+        F  A   I++ K R+ I G+G
Sbjct: 85  KDITIFKNDSPQEILRKVKL--GSLKSIESTTSILDINNFLQAANFIRSAK-RIEIYGVG 141

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  +   L   L   G PS+ +            +   DL I +S SGS+ +    L  
Sbjct: 142 SSSAVAKILQYKLTRLGFPSYALEDPHMQAISAATLNFGDLAIGISQSGSTKDTVDSLNV 201

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A++     I++T    S +  ++D+VL +       P   +   S ++Q+   + L+  L
Sbjct: 202 AKKHGATTISLTEHANSPITKYSDVVLEI--FSGENPVKTSAGRSILVQIFAVEILSGLL 259


>gi|332968033|gb|EGK07120.1| CBS domain protein [Desmospora sp. 8437]
          Length = 439

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 4/125 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D+++       +K+   +    T + E +     VVD+  +L G++T  D+
Sbjct: 186 IKKEILLVEDMLNPEQPPVFLKLDDRVESFHTSVRETKHSRYPVVDDKGRLHGMVTAKDV 245

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                       +E VM KNP  +   T L  A   +    I +L VV+     +G++  
Sbjct: 246 V----GHAFDERIERVMTKNPITVTPKTSLATAAHEMVWEGIELLPVVNQQHLLLGVISR 301

Query: 333 LDLLR 337
            D+++
Sbjct: 302 QDVIK 306


>gi|194289767|ref|YP_002005674.1| inosine 5'-monophosphate dehydrogenase [Cupriavidus taiwanensis LMG
           19424]
 gi|193223602|emb|CAQ69609.1| IMP dehydrogenase [Cupriavidus taiwanensis LMG 19424]
          Length = 487

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ ++          L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAISMAQAGGIGIIH-KNLKPADQAREVARVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + D I +  +       VV EG+ + GIIT  D+   F ++L    V   M   
Sbjct: 99  ISPDMKIRDVIALSQQHGISGFPVV-EGKAVVGIITNRDLR--FEEEL-DAPVRAKMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ +H +  ++VV+   +  G++   D+ + 
Sbjct: 155 EKLVTVAEGAPLEEAKRLMNRHRLERVVVVNQAFELRGLITVKDIQKA 202



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 30/64 (46%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               M   + +  V  G PL +A  +++  R   V VV++  +L+G+IT  DI +     
Sbjct: 147 VRAKMTPREKLVTVAEGAPLEEAKRLMNRHRLERVVVVNQAFELRGLITVKDIQKAVDNP 206

Query: 280 LNTL 283
           L + 
Sbjct: 207 LASK 210


>gi|153009268|ref|YP_001370483.1| CBS domain-containing protein [Ochrobactrum anthropi ATCC 49188]
 gi|151561156|gb|ABS14654.1| CBS domain containing protein [Ochrobactrum anthropi ATCC 49188]
          Length = 143

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 58/121 (47%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  + ++     L  A+ +L++ + G + V DE  ++KGI++E D+ R        
Sbjct: 7   LETKGRDVVVIAPADTLSHAVAMLNKHKIGALVVCDEAGRIKGILSERDVVRAVAAQETK 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++ V +VM    +V  E   +   M+++ +     + V ++  K +GI+   D+++  
Sbjct: 67  AMSMPVTEVMTAKVQVCREHHTINQVMEIMTRSRFRHMPV-EEHGKLVGIISIGDVVKRR 125

Query: 340 I 340
           I
Sbjct: 126 I 126



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 34/83 (40%), Gaps = 2/83 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           V+       T  +           + + +    +   + I++  RF  + V +E  KL G
Sbjct: 56  VVRAVAAQETKAMSMPVTEVMTAKVQVCREHHTINQVMEIMTRSRFRHMPV-EEHGKLVG 114

Query: 266 IITEGDIFRNFHKDLNTLSVEDV 288
           II+ GD+ +   +D+     ED+
Sbjct: 115 IISIGDVVKRRIEDV-EREAEDI 136


>gi|254226649|ref|ZP_04920228.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|125620818|gb|EAZ49173.1| conserved hypothetical protein [Vibrio cholerae V51]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                      P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|153801306|ref|ZP_01955892.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|124123131|gb|EAY41874.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                      P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|92112862|ref|YP_572790.1| inosine-5'-monophosphate dehydrogenase [Chromohalobacter salexigens
           DSM 3043]
 gi|91795952|gb|ABE58091.1| inosine-5'-monophosphate dehydrogenase [Chromohalobacter salexigens
           DSM 3043]
          Length = 489

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  S+ M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLLSSAMDTVTEARLAIAMAQEGGIG-----IIHKSMTIAAQAAEVRKVKKHESVIVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     L D + +  E  +    VV EG  L GI+T  D+     K     SV ++
Sbjct: 96  DPVTVSPKAKLADLLEMADEYGYSGFPVV-EGDTLMGIVTGRDMRFRPDKG---DSVAEI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E T L +    L++H I  ++VVDD  +  G+V   D+ + 
Sbjct: 152 MTPREKLVTVPEGTSLDIIKSKLQEHRIEKILVVDDQFRLRGLVTVRDIEKA 203


>gi|88813078|ref|ZP_01128320.1| isocitrate dehydrogenase [Nitrococcus mobilis Nb-231]
 gi|88789711|gb|EAR20836.1| isocitrate dehydrogenase [Nitrococcus mobilis Nb-231]
          Length = 586

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 49/127 (38%), Gaps = 5/127 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G       D+M+       V     + DA+ ++ EKR G V          GI+T+ D
Sbjct: 451 ASGRTPHTVGDLMNPSPIC--VPADTLVEDAMHLMREKRIGSVITRPRQDGQWGIMTQRD 508

Query: 272 IFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +       ++   T+ V DV  K    +  D  L      +   NI  ++ VD   + IG
Sbjct: 509 VISRIVSANRQPRTVKVGDVASKPLITVPVDMSLHDCADKMSSQNIRRVVAVDQNNEPIG 568

Query: 329 IVHFLDL 335
           I+   D+
Sbjct: 569 IISDTDI 575


>gi|22125204|ref|NP_668627.1| putative DNA-binding transcriptional regulator [Yersinia pestis KIM
           10]
 gi|51597200|ref|YP_071391.1| DNA-binding transcriptional regulator [Yersinia pseudotuberculosis
           IP 32953]
 gi|108808359|ref|YP_652275.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           Antiqua]
 gi|108811376|ref|YP_647143.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           Nepal516]
 gi|145599541|ref|YP_001163617.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           Pestoides F]
 gi|149365381|ref|ZP_01887416.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis CA88-4125]
 gi|153950128|ref|YP_001400123.1| DNA-binding transcriptional regulator [Yersinia pseudotuberculosis
           IP 31758]
 gi|162420206|ref|YP_001607942.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           Angola]
 gi|165928235|ref|ZP_02224067.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165939202|ref|ZP_02227752.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166008528|ref|ZP_02229426.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212580|ref|ZP_02238615.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398892|ref|ZP_02304416.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167421197|ref|ZP_02312950.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167423330|ref|ZP_02315083.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467714|ref|ZP_02332418.1| transcriptional regulator, RpiR family protein [Yersinia pestis
           FV-1]
 gi|170023494|ref|YP_001719999.1| putative DNA-binding transcriptional regulator [Yersinia
           pseudotuberculosis YPIII]
 gi|186896297|ref|YP_001873409.1| putative DNA-binding transcriptional regulator [Yersinia
           pseudotuberculosis PB1/+]
 gi|218929981|ref|YP_002347856.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           CO92]
 gi|229838510|ref|ZP_04458669.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229899079|ref|ZP_04514223.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901626|ref|ZP_04516748.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis Nepal516]
 gi|270489815|ref|ZP_06206889.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
 gi|294504517|ref|YP_003568579.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis Z176003]
 gi|21958069|gb|AAM84878.1|AE013732_10 hypothetical protein y1304 [Yersinia pestis KIM 10]
 gi|51590482|emb|CAH22122.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108775024|gb|ABG17543.1| RpiR-family transcriptional regulatory protein [Yersinia pestis
           Nepal516]
 gi|108780272|gb|ABG14330.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis Antiqua]
 gi|115348592|emb|CAL21534.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis CO92]
 gi|145211237|gb|ABP40644.1| RpiR-family transcriptional regulatory protein [Yersinia pestis
           Pestoides F]
 gi|149291794|gb|EDM41868.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis CA88-4125]
 gi|152961623|gb|ABS49084.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           IP 31758]
 gi|162353021|gb|ABX86969.1| transcriptional regulator, RpiR family [Yersinia pestis Angola]
 gi|165912802|gb|EDR31429.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165919742|gb|EDR37075.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165992910|gb|EDR45211.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206511|gb|EDR50991.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166960686|gb|EDR56707.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051396|gb|EDR62804.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057500|gb|EDR67246.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750028|gb|ACA67546.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           YPIII]
 gi|186699323|gb|ACC89952.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           PB1/+]
 gi|229681555|gb|EEO77649.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis Nepal516]
 gi|229688024|gb|EEO80096.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229694876|gb|EEO84923.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|262362491|gb|ACY59212.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis D106004]
 gi|262366504|gb|ACY63061.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis D182038]
 gi|270338319|gb|EFA49096.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
 gi|294354976|gb|ADE65317.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis Z176003]
 gi|320016068|gb|ADV99639.1| putative RpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 279

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 77/188 (40%), Gaps = 5/188 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           + ++   +++     ++ EK    +L ++L      +    +  ++A + +V++ GIG S
Sbjct: 84  NQILSTDSLKTIGEKLLNEKTA--ALRATLDINSEQRLIQGLGMLRAAQ-KVLLIGIGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +   LA  L   G  +               +    L++ +S+SG   E+      A+
Sbjct: 141 GLVAKDLAYKLLKIGIVAISETDMHVQLAAAQALGEQGLLLAISFSGERREINLAAEEAQ 200

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                ++A+T  + + +   AD  L      E      A  +S+  Q A+ D L +A+++
Sbjct: 201 YCGTKVLALTRFSPNSLQQRADHCLYT--ISEEPVIRSAAISSSTAQYALTDLLFMAMIQ 258

Query: 196 SRNFSEND 203
               +  D
Sbjct: 259 QDIENAQD 266


>gi|325520924|gb|EGC99899.1| KpsF/GutQ family sugar isomerase [Burkholderia sp. TJI49]
          Length = 110

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 1/110 (0%)

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
              +S +   AD+ L      E+CP  LAPT S    LA+GDALA+A+L++R F  +DF 
Sbjct: 1   GRAESSLGTLADVNLNAAVSKEACPLNLAPTASTTAALALGDALAVAVLDARGFGSDDFA 60

Query: 206 VLHPGGKLGTLFVC-ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
             HPGG LG   +    DVM SGD +P V +   L DA+  ++ KR    
Sbjct: 61  RSHPGGALGRRLLTYVRDVMRSGDDVPSVGLDATLSDALFQITAKRLRMT 110


>gi|311070823|ref|YP_003975746.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
 gi|310871340|gb|ADP34815.1| putative transcriptional regulator [Bacillus atrophaeus 1942]
          Length = 283

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/165 (18%), Positives = 61/165 (36%), Gaps = 2/165 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + +++ +       +   AV  +      V   G+G SG +              
Sbjct: 100 TAGNAIQAIQDTSDMLDYQELERAVYMLCQAHT-VHFIGVGASGIVAKDAQQKWLRIHKQ 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +            +      D++  +S+SG + E+  +L  AR   I  +++T  +++ V
Sbjct: 159 ATAFTDTHLVASLIANADERDIVFAISFSGETQEMIDLLSMAREKGITTMSLTQFSQTSV 218

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +  AD+ L         P   A T+S + QL + D L + +   R
Sbjct: 219 SSLADVSLYTAH-SNEAPFRSAATSSRLAQLFMIDTLFLGMAAER 262


>gi|257067030|ref|YP_003153286.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
 gi|256798910|gb|ACV29565.1| transcriptional regulator, RpiR family [Anaerococcus prevotii DSM
           20548]
          Length = 279

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 39/155 (25%), Positives = 68/155 (43%), Gaps = 3/155 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +SS+E +       Q   A++ I      V + GIG SG +       L  +G  +F
Sbjct: 101 INVISSIEKTYALIDEDQISKAIDNIVYA-NFVYLAGIGSSGLVCEDFLYKLQRSGKKAF 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +   A  +   L  I  DDL+I ++++  S E+     YA+     LI+IT   +  +A 
Sbjct: 160 YETDAHTNLSLLTNIKEDDLLICITYTALSKEVLIAAEYAKTIGAKLISITKAGRGKLAN 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +DI++ +P+  +   +G    +S      I D L
Sbjct: 220 MSDILIPIPEIEKKMRYGAI--SSRFASQIITDIL 252


>gi|229916408|ref|YP_002885054.1| signal transduction protein with CBS and DRTGG domains
           [Exiguobacterium sp. AT1b]
 gi|229467837|gb|ACQ69609.1| putative signal transduction protein with CBS and DRTGG domains
           [Exiguobacterium sp. AT1b]
          Length = 436

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +  SD++        +K    +     +    +     V+DE  K+ G+IT  D+
Sbjct: 184 IKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITAKDV 243

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               H       +E VM K+P  +   T +T A   +    I +L VVD+  + +GI+  
Sbjct: 244 IDKSH----DYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISR 299

Query: 333 LDLLRF 338
            D+L+ 
Sbjct: 300 QDVLKA 305



 Score = 36.4 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              S   V +   + +A   +  +    + VVD   +L GII+  D+ +          V
Sbjct: 256 MTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQDVLKALQLANRQPQV 315

Query: 286 E---DVMIKN 292
               D MI N
Sbjct: 316 GETFDNMITN 325


>gi|312868294|ref|ZP_07728494.1| CBS domain protein [Streptococcus parasanguinis F0405]
 gi|311096039|gb|EFQ54283.1| CBS domain protein [Streptococcus parasanguinis F0405]
          Length = 218

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTIAHAADLMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIFEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVM+++   + +   L  A  L+ ++ + +L VVD+ Q   G++   D+ R 
Sbjct: 73  NKTKVKDVMLRDVITVSKFASLEDATYLMYKNKVGILPVVDNDQ-VSGVITDRDIFRA 129



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVT 48



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DA  ++ + + G + VVD   ++ G+IT+ DIFR F
Sbjct: 88  VSKFASLEDATYLMYKNKVGILPVVDND-QVSGVITDRDIFRAF 130


>gi|228989851|ref|ZP_04149829.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
 gi|228769881|gb|EEM18466.1| CBS domain protein [Bacillus pseudomycoides DSM 12442]
          Length = 139

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + +V E  ++ G++T+ D+       K   + 
Sbjct: 8   MSTDIVQCTPLDNVYEAAVKMKEEAIGMIPIV-ENNQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM      +  D  +  A +L+ QH I  L VV +  + +G++   DL
Sbjct: 67  KITNVMTTEIVSVSPDDPIENATELMAQHQIRRLPVV-ENGELVGMLALGDL 117



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M  +         +  A   +++  I ++ +V +  + +G+V   DL+  GI
Sbjct: 2   TTVREFMSTDIVQCTPLDNVYEAAVKMKEEAIGMIPIV-ENNQVVGLVTDRDLVVRGI 58


>gi|153212300|ref|ZP_01948088.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124116678|gb|EAY35498.1| conserved hypothetical protein [Vibrio cholerae 1587]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                      P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|83716476|ref|YP_439591.1| HPP family protein [Burkholderia thailandensis E264]
 gi|83650301|gb|ABC34365.1| HPP family protein [Burkholderia thailandensis E264]
          Length = 416

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 260 LRAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTR 319

Query: 333 LDLLRF 338
            DL + 
Sbjct: 320 ADLSKA 325



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHK 278
                  +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F +
Sbjct: 276 MSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTRADLSKAAPYATPGFLR 335

Query: 279 DLN----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            L+                VM      +   T +   + L   H    + VVD   +  G
Sbjct: 336 GLSARLPRSLVGPAFVARAVMSTRVHTVRPATPIAELVPLFADHGHHHIPVVDAEHRLAG 395

Query: 329 IVHFLDLLRFGI 340
           IV   DL+  G+
Sbjct: 396 IVTQADLI-AGL 406


>gi|262190276|ref|ZP_06048546.1| Signal transduction protein [Vibrio cholerae CT 5369-93]
 gi|262033842|gb|EEY52312.1| Signal transduction protein [Vibrio cholerae CT 5369-93]
          Length = 629

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 90  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 149

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 150 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTER 209

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 210 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 268

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 269 IIDMTDIVR 277


>gi|88604140|ref|YP_504318.1| signal-transduction protein [Methanospirillum hungatei JF-1]
 gi|88189602|gb|ABD42599.1| putative signal-transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 188

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 3/125 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF- 273
            L            +   +     +  A   +  K      +V       GI+TE DI  
Sbjct: 9   QLETKVPVREIMRTNPKTIDYHATVAHAARKMCSKDPSGSCIVLRDGVAVGIVTEQDINC 68

Query: 274 RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +   +DL    + V ++M      I  D  +  A  L+ ++ +  L +++D    IGIV 
Sbjct: 69  KVVARDLRPSEVHVSEIMTSPLITIGTDKTVEDAAHLMIRNRVRRLPIINDKGVVIGIVS 128

Query: 332 FLDLL 336
             D++
Sbjct: 129 VRDIV 133


>gi|323474483|gb|ADX85089.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323477220|gb|ADX82458.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 124

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
            V+    L +   ++ E+  G V VV E    KGI T+ D  +     L++   V     
Sbjct: 15  QVEANTSLQEVCKLMLERGVGSV-VVTEQGVPKGIFTDRDAIKAIAAGLSSSDEVRLAAT 73

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  +I EDT +  A++++  + I  L V +     IG+    D+ +
Sbjct: 74  MGNLIIIDEDTDVFEALKIMAANKIRHLPVKNKNGNIIGMFSITDVHK 121



 Score = 36.0 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 6/68 (8%), Positives = 27/68 (39%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                G        +  +  ++ ++     + +A+ I++  +   + V ++   + G+ +
Sbjct: 56  KAIAAGLSSSDEVRLAATMGNLIIIDEDTDVFEALKIMAANKIRHLPVKNKNGNIIGMFS 115

Query: 269 EGDIFRNF 276
             D+ + +
Sbjct: 116 ITDVHKVY 123


>gi|197122932|ref|YP_002134883.1| hypothetical protein AnaeK_2529 [Anaeromyxobacter sp. K]
 gi|220917724|ref|YP_002493028.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|196172781|gb|ACG73754.1| CBS domain containing protein [Anaeromyxobacter sp. K]
 gi|219955578|gb|ACL65962.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 146

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +  V+    L  A ++L       + VV E +KL G++T+ D+ R           
Sbjct: 8   MTRDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSGQAGAPAARD 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V +VM + P  +   T L  A +L+ +     L V +D    +GIV   D +RF
Sbjct: 67  RAVSEVMTREPVAVRPGTGLAHAARLMLERKFGCLPVCEDDGLLVGIVTEADFVRF 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           SV D M ++   + E   L +A  LL+   I  L VV + +K +G++   DLLR G
Sbjct: 3   SVADFMTRDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSG 57



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D       G         S+VM        V+ G  L  A  ++ E++FGC+ V +
Sbjct: 48  LTQRDLLRSGQAGAPAARDRAVSEVM--TREPVAVRPGTGLAHAARLMLERKFGCLPVCE 105

Query: 259 EGQKLKGIITEGDIFR 274
           +   L GI+TE D  R
Sbjct: 106 DDGLLVGIVTEADFVR 121


>gi|251797764|ref|YP_003012495.1| signal transduction protein with CBS domains [Paenibacillus sp.
           JDR-2]
 gi|247545390|gb|ACT02409.1| putative signal transduction protein with CBS domains
           [Paenibacillus sp. JDR-2]
          Length = 140

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVI 296
           + +   ++ +   G + +V EG KL G +T+ D+       K   + +VE VM  +   I
Sbjct: 22  VYELAVLMKKHDIGFIPIV-EGSKLIGAVTDRDLVVRGYADKHSGSTAVEKVMTTDLLTI 80

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              T +  A  L+ +H I  L VV +  + IG+V   DL
Sbjct: 81  EPGTTMDEAAGLMAKHKIRRLPVV-ENGQLIGVVAIGDL 118



 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ++++VM            +     L+++H+I  + +V +  K IG V   DL+
Sbjct: 2   RKTIKEVMSSPCITATLLDNVYELAVLMKKHDIGFIPIV-EGSKLIGAVTDRDLV 55


>gi|114566944|ref|YP_754098.1| polyA polymerase family protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
 gi|114337879|gb|ABI68727.1| polyA polymerase family protein [Syntrophomonas wolfei subsp.
           wolfei str. Goettingen]
          Length = 880

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 50/112 (44%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + +A  I+       + VV EG+ + G+I+  D+ +    +L    V
Sbjct: 314 MSTPVKTIPPNISMEEAGRIMLRYGHTGMPVV-EGENMIGVISRRDVDKAKIHELGHAPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M      +  DT +    +++ ++++  L + D+  + +GIV   D+LR
Sbjct: 373 KGFMSSGVLSVTPDTPVGEIQRMMVEYDVGRLPITDND-RLMGIVSRTDILR 423



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             D+M    K I  +  +  A +++ ++  + + VV+     IG++   D+ +  I
Sbjct: 310 ARDIMSTPVKTIPPNISMEEAGRIMLRYGHTGMPVVEGENM-IGVISRRDVDKAKI 364



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           V    P+ +   ++ E   G + + D   +L GI++  DI R  H D
Sbjct: 383 VTPDTPVGEIQRMMVEYDVGRLPITDND-RLMGIVSRTDILRTLHGD 428


>gi|90416616|ref|ZP_01224547.1| Hex regulon repressor [marine gamma proteobacterium HTCC2207]
 gi|90331815|gb|EAS47043.1| Hex regulon repressor [marine gamma proteobacterium HTCC2207]
          Length = 285

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 61/161 (37%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L          + +  V+K+   K R+   G+G SG +     +       P  F  
Sbjct: 106 INNLAMVRDKISHSRVNQVVDKLIQAK-RIYFFGVGASGSVARDAENKFFRFNLPVSFHD 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+   +S +G + E+  I   AR     +I +T+   S +A  + 
Sbjct: 165 DVLMQRMLASTGSTGDVFFFISHTGRTKEVVEIAEIARASGSTVIGLTA-PDSPLAQVSS 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +     +  +   P TS I+ L I D LA  +   R 
Sbjct: 224 VTLDVEVPENTDEY--MPMTSRIVHLVILDVLATGVTLRRG 262


>gi|186682226|ref|YP_001865422.1| Cl- channel, voltage-gated family protein [Nostoc punctiforme PCC
           73102]
 gi|186464678|gb|ACC80479.1| Cl- channel, voltage-gated family protein [Nostoc punctiforme PCC
           73102]
          Length = 863

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
              + +A+   S+       ++ E  K+ GI+T+ D+     + L+   ++  +M   P 
Sbjct: 464 QMSIDEAVQAFSDSHHRNFPIL-EKGKVVGIVTQKDLVNLASQQLSGNTTISQIMTPEPV 522

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  L   + +L ++++S L V  + +K +GI+   D++R
Sbjct: 523 TASPTATLAYVLHILNRYHLSCLPVT-EGRKLVGIITRSDIIR 564



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +S  DVM +  + +     +  A+Q     +     +++   K +GIV   DL+
Sbjct: 445 LAQISAADVMQRRVETLSSQMSIDEAVQAFSDSHHRNFPILEK-GKVVGIVTQKDLV 500



 Score = 36.4 bits (83), Expect = 5.7,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
                        L   + IL+     C+ V  EG+KL GIIT  DI R   + LN
Sbjct: 517 MTPEPVTASPTATLAYVLHILNRYHLSCLPVT-EGRKLVGIITRSDIIRVEAERLN 571


>gi|153830912|ref|ZP_01983579.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|254286610|ref|ZP_04961566.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|148873612|gb|EDL71747.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|150423368|gb|EDN15313.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                      P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|229525882|ref|ZP_04415287.1| hypothetical protein VCA_003529 [Vibrio cholerae bv. albensis
           VL426]
 gi|229339463|gb|EEO04480.1| hypothetical protein VCA_003529 [Vibrio cholerae bv. albensis
           VL426]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 65/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                      P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRPAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|222081284|ref|YP_002540647.1| hypothetical protein Arad_7588 [Agrobacterium radiobacter K84]
 gi|221725963|gb|ACM29052.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 234

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 23/120 (19%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------------- 279
           + +A  ++  K    + V+ +  ++ GI+TEGD+ R    +                   
Sbjct: 20  VRNAALLMRAKNISGLPVIGDDGEVCGILTEGDLMRRVGDNWVSSVNDAREHDGRHGLNT 79

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +++ SV + M +N   +  DT +     L+  H I  + V++D  + +GIV   DLL
Sbjct: 80  FVQIHSWSVGEAMNRNVISVPPDTDVGRIGTLMLAHRIKRVPVIND-HRLVGIVSRRDLL 138



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/55 (34%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  +D+M KN   I+    +  A  L+R  NIS L V+ D  +  GI+   DL+R
Sbjct: 1   MQAKDIMTKNVIAIIPALNVRNAALLMRAKNISGLPVIGDDGEVCGILTEGDLMR 55


>gi|83952657|ref|ZP_00961387.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
 gi|83835792|gb|EAP75091.1| CBS domain-containing protein [Roseovarius nubinhibens ISM]
          Length = 144

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 55/107 (51%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           +K G  + DA  IL+E+R G + V ++G++++GI++E DI R+         +  ++D+M
Sbjct: 18  IKPGTLVSDAARILAERRIGGLVVSEDGKQIQGILSERDIVRSLAVRGATCLSDRIDDMM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +NP            +  + +     + VV +  + +GIV   D++
Sbjct: 78  TRNPVCCARGDTSDQVLTRMTEGRFRHMPVV-EDGELVGIVTIGDVV 123



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 25/44 (56%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I   TL++ A ++L +  I  L+V +D ++  GI+   D++R
Sbjct: 16  ITIKPGTLVSDAARILAERRIGGLVVSEDGKQIQGILSERDIVR 59



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 28/61 (45%), Gaps = 2/61 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           +  T      D M + + +   +        +T ++E RF  + VV E  +L GI+T GD
Sbjct: 64  RGATCLSDRIDDMMTRNPVCCARGDTS-DQVLTRMTEGRFRHMPVV-EDGELVGIVTIGD 121

Query: 272 I 272
           +
Sbjct: 122 V 122


>gi|296446760|ref|ZP_06888699.1| CBS domain containing protein [Methylosinus trichosporium OB3b]
 gi|296255763|gb|EFH02851.1| CBS domain containing protein [Methylosinus trichosporium OB3b]
          Length = 147

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTL 283
               + +V     + +A   + E   G + V  E  +L G+I++ DI  R          
Sbjct: 7   MTSDVCVVDPNQSIAEAAKRMVELDVGLLPV-GENDRLVGMISDRDIALRAVAVGKGAET 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V DVM ++ K + ED  +  A + L Q  +  + V+D  ++ +GI+   D+
Sbjct: 66  KVRDVMTRDVKYVYEDREVEEAAESLAQQQLRRMPVLDRSKRLVGIISLADI 117



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           + V+D+M  +  V+  +  +  A + + + ++ +L V  +  + +G++   D+ LR 
Sbjct: 1   MKVKDIMTSDVCVVDPNQSIAEAAKRMVELDVGLLPV-GENDRLVGMISDRDIALRA 56


>gi|239820973|ref|YP_002948158.1| CBS domain containing protein [Variovorax paradoxus S110]
 gi|239805826|gb|ACS22892.1| CBS domain containing protein [Variovorax paradoxus S110]
          Length = 139

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               + ++     + +A   + +  FG + V     ++ G I++ DI  R   +      
Sbjct: 8   MSRDVQVISPDASIAEAARQMRDGDFGMMPV-GANDRMIGSISDRDIAVRAVAEGRGADT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +  A+ ++ ++ I  L +V   ++ +GIV   DL
Sbjct: 67  KVREVMSDRIRWAYEDEPVERAVAIMGEYQIRRLPIVSRDKRLVGIVALGDL 118



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++DVM ++ +VI  D  +  A + +R  +  ++ V     + IG +   D+
Sbjct: 3   TIKDVMSRDVQVISPDASIAEAARQMRDGDFGMMPV-GANDRMIGSISDRDI 53


>gi|86157756|ref|YP_464541.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774267|gb|ABC81104.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 146

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +  V+    L  A ++L       + VV E +KL G++T+ D+ R           
Sbjct: 8   MTRDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSGQAGAPAARD 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V +VM + P  +   T L  A +L+ +     L V +D    +GIV   D +RF
Sbjct: 67  RAVSEVMTREPVAVRPGTGLAHAARLMLERKFGCLPVCEDDGLLVGIVTEADFVRF 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           SV D M ++   + E   L +A  LL+   I  L VV + +K +G++   DLLR G
Sbjct: 3   SVADFMTRDLVTVRESDDLALAESLLKLGGIRHLPVVRE-RKLVGLLTQRDLLRSG 57



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 33/76 (43%), Gaps = 2/76 (2%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D       G         S+VM        V+ G  L  A  ++ E++FGC+ V +
Sbjct: 48  LTQRDLLRSGQAGAPAARDRAVSEVM--TREPVAVRPGTGLAHAARLMLERKFGCLPVCE 105

Query: 259 EGQKLKGIITEGDIFR 274
           +   L GI+TE D  R
Sbjct: 106 DDGLLVGIVTEADFVR 121


>gi|254450613|ref|ZP_05064050.1| CBS domain pair protein [Octadecabacter antarcticus 238]
 gi|198265019|gb|EDY89289.1| CBS domain pair protein [Octadecabacter antarcticus 238]
          Length = 141

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 3/94 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLL 302
           +SEK +G V V+D  +K+ G+ TE D+         D    +V ++M K+P+V  E   +
Sbjct: 1   MSEKNYGAVVVIDADKKVLGVATERDVMNKLVAQELDARKTAVSEIMTKDPRVARETDNM 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              ++++       L VVDD  +   +    D +
Sbjct: 61  LDWLRIMSNERFRRLPVVDDNGQIKAVFTQGDFV 94



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                 + +    ++D + I+S +RF  + VVD+  ++K + T+GD
Sbjct: 47  MTKDPRVARETDNMLDWLRIMSNERFRRLPVVDDNGQIKAVFTQGD 92


>gi|330684495|gb|EGG96211.1| SIS domain protein [Staphylococcus epidermidis VCU121]
          Length = 290

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/204 (20%), Positives = 76/204 (37%), Gaps = 4/204 (1%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +       K  T     L+ N +     +      R   +L ++ +           ++ 
Sbjct: 69  IGLSKYLPKETTVYNVELVDNESTASLKK--KMHSRAKGALNNANETLDDKTIDRICDQF 126

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           K    R+ I G G S  + + L   L+  G     V         L      D ++ ++ 
Sbjct: 127 KQS-NRIFIYGYGASFVVATDLYQKLSRIGMNVQLVQETHIFTTMLASCDSRDCVVFITN 185

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G   E++AI      + IP+I ITS +K++++  +DIVL    + +     +  TTS  
Sbjct: 186 NGMQSEMQAIAKVVVDYHIPIITITSSSKNIISQMSDIVLDYG-QSDENEMRMGATTSLF 244

Query: 181 MQLAIGDALAIALLESRNFSENDF 204
            Q+   D L    +     S  DF
Sbjct: 245 AQMFTIDILYYRYIALNYQSSLDF 268


>gi|323705010|ref|ZP_08116586.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium xylanolyticum LX-11]
 gi|323535436|gb|EGB25211.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacterium xylanolyticum LX-11]
          Length = 441

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + D   +L++       VVDE   L GI+T  +I +    D     + D+M +NP  
Sbjct: 209 NQTVNDWKALLNKTSHTRYPVVDESGTLVGIVTSREIAKADDND----KIGDIMARNPIY 264

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + E T +  A  L+   NI VL V  + ++ +GI+   D+++ 
Sbjct: 265 VTETTTVAFAAHLMIWWNIEVLPVT-NNKELVGIISREDVIKA 306



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M  NP  +  +  +     LL + + +   VVD+    +GIV   ++ + 
Sbjct: 195 VSNIMSSNPIYMTTNQTVNDWKALLNKTSHTRYPVVDESGTLVGIVTSREIAKA 248


>gi|167748954|ref|ZP_02421081.1| hypothetical protein ANACAC_03735 [Anaerostipes caccae DSM 14662]
 gi|317472645|ref|ZP_07931960.1| rpiR family Helix-turn-helix domain-containing protein
           [Anaerostipes sp. 3_2_56FAA]
 gi|167651576|gb|EDR95705.1| hypothetical protein ANACAC_03735 [Anaerostipes caccae DSM 14662]
 gi|316899822|gb|EFV21821.1| rpiR family Helix-turn-helix domain-containing protein
           [Anaerostipes sp. 3_2_56FAA]
          Length = 282

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 74/186 (39%), Gaps = 4/186 (2%)

Query: 13  RKGHSLMKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           +  H      ++    +S++      +  L+ +L           ++ I   K  V  T 
Sbjct: 81  QDDHEFSNEISIDNIEQSLMNIMASKMEELKETLSSIDGKMLREIIDLILNAK-VVEFTA 139

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G +  I    +      G P+      E        + + D++I +S SG+S  L  + 
Sbjct: 140 MGNTIPIALDGSYKFNQLGIPAVGSTIWETQEAYARTMRKGDVMIAVSASGASRHLLNMA 199

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             A+   + ++AIT++ KS +A  +D  L      +     ++ T   +  +A+ D+L +
Sbjct: 200 NIAKENGVKVVAITNQAKSPLAEASDYTLVTATREQVFHDQVSFT--RMAAMAVIDSLFL 257

Query: 192 ALLESR 197
            L  ++
Sbjct: 258 LLFSTK 263


>gi|111025031|ref|YP_707451.1| hypothetical protein RHA1_ro08249 [Rhodococcus jostii RHA1]
 gi|110824010|gb|ABG99293.1| conserved hypothetical protein [Rhodococcus jostii RHA1]
          Length = 183

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V+    +  A  +L+E  F  V VVD+  +L G++  GD+ R       + +V
Sbjct: 5   MQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAGQTC--SETV 62

Query: 286 EDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM   P V       L    Q+L Q  +  L VVD   + +GI+   D++R 
Sbjct: 63  GEVMTA-PAVAAPMYHYLADVSQMLLQQGLRSLPVVDIDGRVVGILSRSDVVRL 115



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 30/52 (57%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VM +  +V+ +   +  A  LL ++  + + VVDD  + +G+++  D+LR G
Sbjct: 4   VMQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 55


>gi|262370497|ref|ZP_06063823.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
 gi|262314839|gb|EEY95880.1| CBS domain-containing protein [Acinetobacter johnsonii SH046]
          Length = 143

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTL 283
             +I  +     + +AI+++++K  G + V  E  ++ GI++E D  R      +     
Sbjct: 13  HQAIYTISPEATVFEAISLMADKGIGALVVTHEE-RVVGILSERDYMRKVMLMERTSKQT 71

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V ++M      +     +   + L+   ++  L VV +  K +G++   DL++ 
Sbjct: 72  TVNEIMTAKVLTVTTAVTVEECLDLMTDRHLRHLPVV-EQDKLLGLISIGDLVKA 125


>gi|255745687|ref|ZP_05419635.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio cholera CIRS 101]
 gi|262159036|ref|ZP_06030148.1| Signal transduction protein [Vibrio cholerae INDRE 91/1]
 gi|262169395|ref|ZP_06037087.1| Signal transduction protein [Vibrio cholerae RC27]
 gi|255736762|gb|EET92159.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio cholera CIRS 101]
 gi|262022208|gb|EEY40917.1| Signal transduction protein [Vibrio cholerae RC27]
 gi|262029221|gb|EEY47873.1| Signal transduction protein [Vibrio cholerae INDRE 91/1]
          Length = 629

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 90  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 149

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 150 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 209

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 210 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 268

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 269 IIDMTDIVR 277


>gi|327483978|gb|AEA78385.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio cholerae LMA3894-4]
          Length = 629

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 90  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 149

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 150 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 209

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 210 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 268

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 269 IIDMTDIVR 277


>gi|322391656|ref|ZP_08065124.1| CBS domain protein [Streptococcus peroris ATCC 700780]
 gi|321145467|gb|EFX40860.1| CBS domain protein [Streptococcus peroris ATCC 700780]
          Length = 218

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTNVAHAADLMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIFEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+  +  G++   D+ R 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDN-GQLYGVITDRDVFRA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTNVAHAADLMREQGLHRLPVIEND-KLVGLVT 48



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   +L G+IT+ D+FR F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NGQLYGVITDRDVFRAF 130


>gi|312277767|gb|ADQ62424.1| acetoin utilization protein [Streptococcus thermophilus ND03]
          Length = 139

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A+ I+ +K    + V+ E  KL G+ITEG +                +  L
Sbjct: 8   VSPETTVATAVDIIRDKGLRRLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLL 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+   
Sbjct: 67  NKTKVGDIMIKNVLTVSKYASLEDAIYIMLQNKVGVLPVVDNDQ-ISGIITDKDVFHA 123



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M K    +  +T +  A+ ++R   +  L V++   K +G++ 
Sbjct: 1   MTKRVVYVSPETTVATAVDIIRDKGLRRLPVIEHD-KLVGLIT 42



 Score = 43.0 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+F  F  +L   S
Sbjct: 82  VSKYASLEDAIYIMLQNKVGVLPVVDND-QISGIITDKDVFHAFFGNLRIWS 132


>gi|284033948|ref|YP_003383879.1| RpiR family transcriptional regulator [Kribbella flavida DSM 17836]
 gi|283813241|gb|ADB35080.1| transcriptional regulator, RpiR family [Kribbella flavida DSM
           17836]
          Length = 300

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 42/176 (23%), Positives = 71/176 (40%), Gaps = 6/176 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S      +   A++R +      L  +   Q   AV    A   RV + G G S  +  
Sbjct: 101 DSLADVVGKVAFADERAVRETAQQLDVDTLAQVVDAV----AKAPRVDLYGSGASAFVAL 156

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L      +F       +     ++   D+ I +S +G++ E+   L  A R    
Sbjct: 157 DLQQKLHRIRRVAFAWSDVHVALTSAALLGDGDVAIGISHTGTTVEVIEALEEAARHGAT 216

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +A+T+  +S +A  AD+VLT      +   G    +S I QL + D L I + +S
Sbjct: 217 TVAVTNFPRSPLAHAADLVLTTAARETTYRSGA--MSSRIAQLMVIDCLFIGVAQS 270


>gi|153937473|ref|YP_001387245.1| RpiR family transcriptional regulator [Clostridium botulinum A str.
           Hall]
 gi|152933387|gb|ABS38886.1| transcriptional regulator, RpiR family [Clostridium botulinum A
           str. Hall]
          Length = 179

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/147 (23%), Positives = 63/147 (42%), Gaps = 3/147 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +   AV+ IK  +  + + G+G S  +       L        F   +         I
Sbjct: 14  DEKLLEAVKAIKNAET-IYLYGVGASAMVAMDFQYKLLRINKKVMFQQDSHLQLAVSVHI 72

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T  D+ + +S+SG++ E+   +  A++     IAIT   KS+++  ADI L +P   +  
Sbjct: 73  TNRDVAVAISYSGNTREVNLAVEEAKKNGATTIAITKCGKSILSNIADINLNIPSIEKDL 132

Query: 170 PHGLAPTTSAIMQLAIGDALAIALLES 196
             G    +S   QL + D+L + + + 
Sbjct: 133 RIGAI--SSRTSQLFVTDSLFLGIAKE 157


>gi|309790619|ref|ZP_07685173.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
 gi|308227347|gb|EFO81021.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
          Length = 221

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 51/134 (38%), Gaps = 30/134 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----------- 281
           V    P++  +  L       V V+D+ Q ++GIIT+GD+ R   + +            
Sbjct: 84  VPTNAPVVAVLNALMLSPLRRVVVLDDNQVVQGIITDGDVLRRASRRMQPNALGRLVAWL 143

Query: 282 --------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                              ++M      I  D  +T  ++L+  H I  L VV+     +
Sbjct: 144 SVSKAPPAIQVEGYERMASEIMSCPAITIRSDAPVTEGVRLMMAHKIKALPVVNASGAFV 203

Query: 328 GIVHFLDLLRFGII 341
           G+V+     R G++
Sbjct: 204 GMVN-----RAGLL 212


>gi|298498617|ref|ZP_07008424.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Vibrio
           cholerae MAK 757]
 gi|297542950|gb|EFH79000.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Vibrio
           cholerae MAK 757]
          Length = 589

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 50  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 109

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 110 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 169

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 170 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 228

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 229 IIDMTDIVR 237


>gi|297578876|ref|ZP_06940804.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297536470|gb|EFH75303.1| conserved hypothetical protein [Vibrio cholerae RC385]
          Length = 637

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|254735030|ref|ZP_05192741.1| CBS domain protein [Bacillus anthracis str. Western North America
           USA6153]
          Length = 140

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM      +  D  L  A +L+ QH I  L VV+  Q  +G +   DL
Sbjct: 67  KITNVMTTXIISVAPDDSLEKATELMAQHQIRRLPVVESDQTLLGCLALGDL 118



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVTDRDLVVRGI 58


>gi|167647687|ref|YP_001685350.1| signal-transduction protein [Caulobacter sp. K31]
 gi|167350117|gb|ABZ72852.1| putative signal-transduction protein with CBS domains [Caulobacter
           sp. K31]
          Length = 143

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 47/110 (42%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
                +  A  +L  +R G + V++E + + GI++E DI R   K      +  +   M 
Sbjct: 18  SPNETVGAAAALLHTRRVGAMVVLEEDETIAGILSERDIVRVIAKEGAGALSKPISSCMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++      +  +   ++ +    I  L V    ++  GI+   DL+++ I
Sbjct: 78  RDVVFAQPEETVDALLERMTDRRIRHLPVC-KGKRLAGIISIGDLVKYKI 126



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 20/43 (46%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +  +  A  LL    +  ++V+++ +   GI+   D++R
Sbjct: 16  TASPNETVGAAAALLHTRRVGAMVVLEEDETIAGILSERDIVR 58


>gi|329668118|gb|AEB94066.1| hypothetical protein LJP_1750c [Lactobacillus johnsonii DPC 6026]
          Length = 286

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 69/152 (45%), Gaps = 4/152 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
              V++I     R++  G+G SG + + +       G    +      +   +G  + DD
Sbjct: 120 SKLVKEINQAS-RILAYGVGASGLVANDIYQKFLRLGKAITYTTDFHIAATQIGNFSPDD 178

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++I++S  G + E+  +L   +   I  + +T++ ++ +A  ADIVL L ++        
Sbjct: 179 ILILISNQGMTTEIGDLLEVGKSVGIKTVLLTAQPRTALAKKADIVL-LTQDIGEPKIRS 237

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFY 205
             TTS I QL + D L  A +    FS+  F 
Sbjct: 238 GATTSMISQLFVVDVLVFAYISR--FSDKIFK 267


>gi|229010151|ref|ZP_04167361.1| CBS domain protein [Bacillus mycoides DSM 2048]
 gi|228751001|gb|EEM00817.1| CBS domain protein [Bacillus mycoides DSM 2048]
          Length = 139

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + V+ E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVI-ENKQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  QITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M  +         +  A   +++ ++ ++ V+ + ++ +G+V   DL+  GI
Sbjct: 2   TQVRELMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVI-ENKQVVGLVTDRDLVVRGI 58


>gi|209542881|ref|YP_002275110.1| putative XRE family transcriptional regulator [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209530558|gb|ACI50495.1| putative transcriptional regulator, XRE family [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 150

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
             G  +  V+    + D   +LS++R G V V+D    L G+++E  +     +   D  
Sbjct: 11  RKGHHVTTVREDMNVADVARLLSDRRIGGVPVLDAAGVLVGLVSERALVGALSRYGADFA 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            L  EDVM++N      D  +    + +       + V+ +    +G+V   DL++F I
Sbjct: 71  RLRAEDVMMRNVPTTSLDEDIVAVARRMTGRRARHVPVL-ENGAVVGLVSIGDLVKFRI 128


>gi|297598372|ref|NP_001045471.2| Os01g0961200 [Oryza sativa Japonica Group]
 gi|57899170|dbj|BAD87222.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
 gi|57900300|dbj|BAD87133.1| CBS domain-containing protein-like [Oryza sativa Japonica Group]
 gi|255674099|dbj|BAF07385.2| Os01g0961200 [Oryza sativa Japonica Group]
          Length = 533

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 7/135 (5%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P   +       +           +     + +A   ++ KR     + D    L GI
Sbjct: 39  SKPASPVQAPSPERTVKKLRLAKALTLPEATSVSEACRRMALKRVDAALLTDSNGMLSGI 98

Query: 267 ITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T  DI  R   + L  +  +V   M +NP  ++ ++    A+Q + +     L VV+  
Sbjct: 99  LTAEDISGRVIAEGLRPDETNVAKAMTRNPVFVMSNSPAIEALQKMVKGKFRHLPVVEHG 158

Query: 324 QKAIGIVHFLDLLRF 338
           +    ++  LD+ +F
Sbjct: 159 E----VIAMLDITKF 169



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 7/149 (4%)

Query: 185 IGDALAIALLESRNFSENDF---YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
            G A+A A+        NDF   +      +        S ++   +S+P+V    P+I 
Sbjct: 183 QGSAIAAAMEGVERQWGNDFPGPHSFIENLRDQLFKPSLSTIITENNSVPVVSPSDPVIA 242

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NTLSVEDVMIKNPKVILE 298
           A   + E R   V VV  G  L GI+T  D+  R   + L  +   VE VM  NP     
Sbjct: 243 AAKKMREYRVNSV-VVMTGNMLLGILTSKDLVLRLVAQSLSPDVTLVEKVMTTNPDCATL 301

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           DT +  A+  ++      + V D   + I
Sbjct: 302 DTSILEALHSMQDGKYLHIPVADKNGQII 330



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 274 RNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            N    L   S+  ++ +N    V+     +  A + +R++ ++ ++V+      +GI+ 
Sbjct: 210 ENLRDQLFKPSLSTIITENNSVPVVSPSDPVIAAAKKMREYRVNSVVVMT-GNMLLGILT 268

Query: 332 FLDLL 336
             DL+
Sbjct: 269 SKDLV 273


>gi|48477542|ref|YP_023248.1| inosine 5'-monophosphate dehydrogenase [Picrophilus torridus DSM
           9790]
 gi|48430190|gb|AAT43055.1| inosine-5'-monophosphate dehydrogenase [Picrophilus torridus DSM
           9790]
          Length = 483

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 36/165 (21%), Positives = 66/165 (40%), Gaps = 10/165 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLE--SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA+    +      +  +      L  +     +       +
Sbjct: 45  KVPIVSSPMDTVTESEMAIAMARYGALGVLHRNISINEQ---LEMVKRVKKEETIIIRDV 101

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V    P+  A TI+  +    + VV    KL GI+T+ D+  + +K L    V+D+M 
Sbjct: 102 ITVDENTPVNVARTIMMTRNIAGLPVV-TSGKLSGILTKRDLEFSDNKGL----VKDIMT 156

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K+     ED  +  A  +L ++ I  L +VD   +  G++   D+
Sbjct: 157 KDVVYADEDISIDEAKYILYKNRIEKLPLVDKKGRLTGLITAKDI 201


>gi|254227435|ref|ZP_04920867.1| transcriptional regulator, RpiR family protein [Vibrio sp. Ex25]
 gi|262396299|ref|YP_003288152.1| transcriptional regulator RpiR family [Vibrio sp. Ex25]
 gi|151940047|gb|EDN58873.1| transcriptional regulator, RpiR family protein [Vibrio sp. Ex25]
 gi|262339893|gb|ACY53687.1| transcriptional regulator RpiR family [Vibrio sp. Ex25]
          Length = 283

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            ++  +         H AV+ +   + RV + GIG S      L+  L   G  +     
Sbjct: 108 DAMFQTTNTLSYEACHQAVKWLSEAR-RVEVVGIGGSALTAKDLSFKLLKLGITALSEQD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +         ++ +D+ I +S+SG   E+      A+     +IA+++  +S +   ADI
Sbjct: 167 SHVQIAVARTLSPEDVQIAISFSGERKEILVAAEAAKEQGAKVIALSAPGRSRLRGIADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
                       H  +   S   Q  I D L I L++ R+
Sbjct: 227 TFDT--IANEMEHRSSSIASRTAQNVITDLLFIILVQQRD 264


>gi|302392586|ref|YP_003828406.1| sigma54 specific transcriptional regulator [Acetohalobium
           arabaticum DSM 5501]
 gi|302204663|gb|ADL13341.1| putative sigma54 specific transcriptional regulator [Acetohalobium
           arabaticum DSM 5501]
          Length = 693

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 6/116 (5%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NT 282
           + + D I L K    +  A  I   +R     VVD   KL GI T+  + +   + L N+
Sbjct: 6   IMTKDPITLCKEDT-IGKAAEIFHNERIDGAPVVDAENKLIGIFTKSHLMKAVKEGLENS 64

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V  +M  +   I ED  L  A ++     I  L VVD     +GI+   DL+  
Sbjct: 65  IAVGKLMQTDVMKITEDRTLESAWKI----KIGRLPVVDKDNGLVGILTRTDLVEA 116



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M K+P  + ++  +  A ++     I    VVD   K IGI     L++ 
Sbjct: 1   MKVAEIMTKDPITLCKEDTIGKAAEIFHNERIDGAPVVDAENKLIGIFTKSHLMKA 56


>gi|153824304|ref|ZP_01976971.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae B33]
 gi|126518173|gb|EAZ75398.1| inosine-5'-monophosphate dehydrogenase [Vibrio cholerae B33]
          Length = 274

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 64/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+      
Sbjct: 41  NIPMVSASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM 
Sbjct: 98  VTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 204


>gi|206901202|ref|YP_002250627.1| anti-sigma regulatory factor [Dictyoglomus thermophilum H-6-12]
 gi|206740305|gb|ACI19363.1| anti-sigma regulatory factor [Dictyoglomus thermophilum H-6-12]
          Length = 290

 Score = 77.2 bits (189), Expect = 3e-12,   Method: Composition-based stats.
 Identities = 25/93 (26%), Positives = 46/93 (49%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            I+  KR   + +VD+ ++L G++T  ++ +   K    +  E  M++ PK +  D  L 
Sbjct: 35  EIMRIKRIDAIPIVDDLERLIGLVTVENVIQALVKGDLNVPCERYMVREPKCLKPDDNLY 94

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A+   RQ       VVD+  K +GI+   D++
Sbjct: 95  EALLKFRQFRFGRFPVVDEEGKVLGILSTKDIV 127



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  + V+D+M  +   +     +    +++R   I  + +VDD ++ IG+V   ++++ 
Sbjct: 8   LENIKVKDIMNTDIVRLRPYQDMRSLQEIMRIKRIDAIPIVDDLERLIGLVTVENVIQA 66



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 30/70 (42%), Gaps = 6/70 (8%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 +       +K    L +A+    + RFG   VVDE  K+ GI++  DI      
Sbjct: 73  NVPCERYMVREPKCLKPDDNLYEALLKFRQFRFGRFPVVDEEGKVLGILSTKDIV----- 127

Query: 279 DLNTLSVEDV 288
            LN + +ED+
Sbjct: 128 -LNLVDIEDI 136


>gi|313891300|ref|ZP_07824918.1| CBS domain protein [Streptococcus pseudoporcinus SPIN 20026]
 gi|313120367|gb|EFR43488.1| CBS domain protein [Streptococcus pseudoporcinus SPIN 20026]
          Length = 220

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +    +  +     +  A  I+ ++    + V++E  +L G++T G +            
Sbjct: 6   YMTKEVVTITPNTGVAQAADIMRDQDIRRLPVMEED-RLVGLVTAGTMAEATPSKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN   ++D+M+K    I  D  L  A+ L+ +H I VL V+DD     GI+  
Sbjct: 65  IYEMNYLLNKTKIKDIMLKKVITITPDASLEDAIYLMLEHKIGVLPVLDD-NHLCGIITD 123

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 124 RDVFKA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    I  +T +  A  ++R  +I  L V+++  + +G+V 
Sbjct: 1   MAVKDYMTKEVVTITPNTGVAQAADIMRDQDIRRLPVMEED-RLVGLVT 48



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     L DAI ++ E + G + V+D+   L GIIT+ D+F+ F
Sbjct: 88  ITPDASLEDAIYLMLEHKIGVLPVLDDN-HLCGIITDRDVFKAF 130


>gi|260463644|ref|ZP_05811842.1| putative signal transduction protein with CBS domains
           [Mesorhizobium opportunistum WSM2075]
 gi|259030498|gb|EEW31776.1| putative signal transduction protein with CBS domains
           [Mesorhizobium opportunistum WSM2075]
          Length = 232

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 51/130 (39%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     + DA  ++   +   + V+    +L GI++EGD  R                  
Sbjct: 14  VDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLRRRELGTQRKRPRWLEFLI 73

Query: 280 -----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                       N   +E+VM ++       T L   ++L+ +H+++ + V+    K +G
Sbjct: 74  SPGKAAEEYVLANGRRIEEVMSESVVTASPTTSLATVVELMTRHHVNRIPVL-AEGKVVG 132

Query: 329 IVHFLDLLRF 338
           IV   DL+R 
Sbjct: 133 IVTRSDLVRA 142



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  E +M      +     +  A  L+  + IS L V+ +  + +GIV   D LR
Sbjct: 1   MQAEAIMTTPVIAVDPSASVADAAALMLANKISGLPVIRNDGELMGIVSEGDFLR 55



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%), Gaps = 3/70 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           PG       +     +    S  +V       L   + +++      + V+ E  K+ GI
Sbjct: 75  PGKAAEEYVLANGRRIEEVMSESVVTASPTTSLATVVELMTRHHVNRIPVLAE-GKVVGI 133

Query: 267 ITEGDIFRNF 276
           +T  D+ R  
Sbjct: 134 VTRSDLVRAL 143


>gi|121534276|ref|ZP_01666100.1| sigma54 specific transcriptional regulator, Fis family [Thermosinus
           carboxydivorans Nor1]
 gi|121307046|gb|EAX47964.1| sigma54 specific transcriptional regulator, Fis family [Thermosinus
           carboxydivorans Nor1]
          Length = 700

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 45/117 (38%), Gaps = 7/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLS 284
               +  V  G  L     I          VVD   KL G++T+  + +    D    L 
Sbjct: 7   MSTRVVTVTPGMTLQQTARIFDSVGIDGAPVVDANGKLIGLVTKSHLIKALAADNFYNLR 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNI---SVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM  +   + E+T +     L + + I       VVD   + IG +   DL+++
Sbjct: 67  VGDVMTPDVFTLQENTTIQE---LQQNNRIFRYGRFPVVDGENRPIGFITRTDLVKY 120



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 21/56 (37%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V D+M      +     L    ++     I    VVD   K IG+V    L++ 
Sbjct: 1   MRVRDLMSTRVVTVTPGMTLQQTARIFDSVGIDGAPVVDANGKLIGLVTKSHLIKA 56


>gi|261402988|ref|YP_003247212.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
 gi|261369981|gb|ACX72730.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus vulcanius M7]
          Length = 284

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 74/200 (37%), Gaps = 2/200 (1%)

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I I    K +       +    K      +   P  +A     +G   ++ +++    
Sbjct: 2   KVIKIAENKKIITVYPTTTIRNALKTMNENRYRRLPVVNAGNNKVVGIITSMDIVDFMGG 61

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
                 +    G+     +         +++  +K    + DAI     K  G V +V++
Sbjct: 62  GSKYNLIREKHGRNLLSAINEPVREIMEENVITLKENSEIDDAIETFLNKNVGGVPIVND 121

Query: 260 GQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
             +L  +ITE DI R+    ++    ++D + ++  V      L    + + ++    L 
Sbjct: 122 ENQLISLITERDIIRSLIDKIDENAVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLP 181

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV +  + +GI+   D ++ 
Sbjct: 182 VVSEE-RLVGIITSTDFIKL 200



 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 14/125 (11%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------- 279
              + +   G  L D    +    F  + VV E  +L GIIT  D  +    D       
Sbjct: 153 TRDVIVATPGERLKDVARTMVRNGFRRLPVVSEE-RLVGIITSTDFIKLLGSDWAFNHLK 211

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  + +E++M K+     E   L    + +  ++I  L V+D+  + +GI+   
Sbjct: 212 TGNVREITNVRMEEIMKKDVITAKEGNKLKDIAKTMIDNDIGALPVIDENNRVVGIITEK 271

Query: 334 DLLRF 338
           D+L++
Sbjct: 272 DILKY 276



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/80 (22%), Positives = 28/80 (35%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     +   K G  L D    + +   G + V+DE  +
Sbjct: 204 DWAFNHLKTGNVREITNVRMEEIMKKDVITAKEGNKLKDIAKTMIDNDIGALPVIDENNR 263

Query: 263 LKGIITEGDIFRNFHKDLNT 282
           + GIITE DI + F    + 
Sbjct: 264 VVGIITEKDILKYFEDYFSK 283


>gi|59711244|ref|YP_204020.1| inositol-5-monophosphate dehydrogenase [Vibrio fischeri ES114]
 gi|197335855|ref|YP_002155394.1| inosine-5'-monophosphate dehydrogenase [Vibrio fischeri MJ11]
 gi|59479345|gb|AAW85132.1| IMP dehydrogenase [Vibrio fischeri ES114]
 gi|197317345|gb|ACH66792.1| inosine-5'-monophosphate dehydrogenase [Vibrio fischeri MJ11]
          Length = 487

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVV---SAP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D   +  +  F    VV E  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVRPDATIQDVKELTEKHGFAGFPVVTETNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKSRLASVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|295693504|ref|YP_003602114.1| transcriptional regulator, rpir family [Lactobacillus crispatus
           ST1]
 gi|295031610|emb|CBL51089.1| Transcriptional regulator, RpiR family [Lactobacillus crispatus
           ST1]
          Length = 281

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 77/178 (43%), Gaps = 9/178 (5%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF--------QFHCA 56
           F  F+    +     +++ V   + +       L  L+ SL   ++             A
Sbjct: 64  FKDFQIACAQEMPNKQDAMVDTIINTNDEPTSVLYKLQLSLGKNIADIGKTIDHKSLDAA 123

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           V+ +++ + ++ + G G SG     L   L  +G    FV ++  +   +  I ++D++I
Sbjct: 124 VDLMRSAQ-QIYVAGEGASGLAAQDLFYKLIRSGKNVNFVQSSHIALEQVANINKEDILI 182

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           V S+SG + E   +   A++ +  ++A+T    S +   AD V+TLP   +   +G  
Sbjct: 183 VFSYSGLTQEPLLMAKQAQKNNAKIVAVTRIQDSPLKNMADTVITLPSNEKLLRYGAI 240


>gi|262047807|ref|ZP_06020757.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|293379826|ref|ZP_06625948.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|312978103|ref|ZP_07789848.1| putative phosphosugar-binding transcriptional regulator
           [Lactobacillus crispatus CTV-05]
 gi|260571864|gb|EEX28435.1| transcriptional regulator [Lactobacillus crispatus MV-3A-US]
 gi|290923598|gb|EFE00479.1| SIS domain protein [Lactobacillus crispatus 214-1]
 gi|310895078|gb|EFQ44147.1| putative phosphosugar-binding transcriptional regulator
           [Lactobacillus crispatus CTV-05]
          Length = 281

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 69/162 (42%), Gaps = 13/162 (8%)

Query: 25  QCALRSIIAEKRG----LSSLESSLQGELSF--------QFHCAVEKIKAIKGRVVITGI 72
              + +II E       L  L+ SL+  ++             AV+ ++A + ++ + G 
Sbjct: 80  DNTVDTIINENDEPTSVLYKLQISLEKNIADIGKTIDHQSLASAVQLMRAAQ-KIYVAGE 138

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG     L   L  +G  + FV ++  +   +  I  +D++I  S+SG + E   +  
Sbjct: 139 GASGLAAQDLFYKLIRSGKDAAFVQSSHIALEQVANIKTEDILITFSYSGLTQEPLLMAK 198

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
            A+     +IA+T    S +   AD ++ LP   +   +G  
Sbjct: 199 QAKENQAKIIAVTRAQNSPLKDIADTIIALPSNEKLLRYGAV 240


>gi|332655343|ref|ZP_08421083.1| transcriptional regulator, RpiR family [Ruminococcaceae bacterium
           D16]
 gi|332515848|gb|EGJ45458.1| transcriptional regulator, RpiR family [Ruminococcaceae bacterium
           D16]
          Length = 298

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 7/187 (3%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
             S  +   +L K+ + +   + I A E   L+    +L  ++  Q    V  I +   R
Sbjct: 94  VPSTQQYHPALTKDDSTESICQKIFASETSALTKTLQNLNIQIIEQ----VAGILSTARR 149

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           +++ G G S  +       L   G  +  V   +    +  ++ R+D+++  S SG++  
Sbjct: 150 ILLCGTGGSQVVARDAQHKLLKVGIHASAVEDKDIQLMEASLLEREDVLVAFSHSGNNVH 209

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
               +  AR+    ++ +TS  K+ +A  AD  LT   EP          ++ + QLA+ 
Sbjct: 210 TLRAVELARQNRATIVVLTSSGKTQLAQEADYTLTTVSEPTIFS--SESGSTRLAQLAVI 267

Query: 187 DALAIAL 193
           D L   +
Sbjct: 268 DCLVAVI 274


>gi|296536771|ref|ZP_06898826.1| CBS domain containing membrane protein [Roseomonas cervicalis ATCC
           49957]
 gi|296262903|gb|EFH09473.1| CBS domain containing membrane protein [Roseomonas cervicalis ATCC
           49957]
          Length = 252

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 53/136 (38%), Gaps = 24/136 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  V    P++    +L+++    V V+     + GI+TE D+ R           
Sbjct: 31  MTPDVVTVPPETPVLAIAQLLADRGISAVPVLAADGAVLGIVTEADLIRRLAGHDQPMSL 90

Query: 278 -----KDLNTL----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                 DL+ +          +  DVM      +   T ++   +L+ Q +I  ++VV +
Sbjct: 91  MRQLFADLDRMAERYASTHGATAADVMTIGAISVEPATPVSAIAELMEQKHIRRVLVV-E 149

Query: 323 CQKAIGIVHFLDLLRF 338
             +  G+V   DLLR 
Sbjct: 150 QGRLRGVVSRADLLRA 165



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+ +D+M  +   +  +T +    QLL    IS + V+      +GIV   DL+R
Sbjct: 25  LTAKDLMTPDVVTVPPETPVLAIAQLLADRGISAVPVLAADGAVLGIVTEADLIR 79



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V+   P+     ++ +K    V VV E  +L+G+++  D+ R  
Sbjct: 124 VEPATPVSAIAELMEQKHIRRVLVV-EQGRLRGVVSRADLLRAL 166


>gi|291522462|emb|CBK80755.1| inosine-5'-monophosphate dehydrogenase [Coprococcus catus GD/7]
          Length = 484

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NVPLMSAGMDTVTEHRMAIAMARQGGIG-----IIHKNMSIEAQAEEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     L DA  ++++ R   V +  EG+KL GI+T  D+   F  D +   +++ 
Sbjct: 96  DPFYLSPEHTLADADRLMAKFRISGVPIT-EGKKLVGILTNRDLK--FETDYSK-KIKEC 151

Query: 289 MI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M  +      E   L  A ++L Q     L +VDD     G++   D+
Sbjct: 152 MTSEGLVTAKEGVTLEEAKKILGQARKEKLPIVDDNFNLKGLITIKDI 199


>gi|226306444|ref|YP_002766404.1| hypothetical protein RER_29570 [Rhodococcus erythropolis PR4]
 gi|226185561|dbj|BAH33665.1| hypothetical protein RER_29570 [Rhodococcus erythropolis PR4]
          Length = 477

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 48/131 (36%), Gaps = 3/131 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H  G+                   +      + +A  ++++     V +  E     GI 
Sbjct: 4   HSAGQGIQSPAMRRVRDLLRGPAIVCDGQATIREAAKLMTDAGRRAVVIPTETNGF-GIF 62

Query: 268 TEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           TEGD+  R     ++    V  VM  +   +  D L   A+  + ++ +  L VV +   
Sbjct: 63  TEGDLRARVVVGGIDSNEPVSTVMTPSAVTVDPDRLGADAVTDMLEYGLRHLPVVTEAGA 122

Query: 326 AIGIVHFLDLL 336
            +G++   DLL
Sbjct: 123 LMGVLELSDLL 133


>gi|84490211|ref|YP_448443.1| hypothetical protein Msp_1429 [Methanosphaera stadtmanae DSM 3091]
 gi|84373530|gb|ABC57800.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 311

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 56/110 (50%), Gaps = 7/110 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              ++D  T++ E+  G + +++  +K+ GI+TEGDI +   K    L V+D+M  N   
Sbjct: 122 TDTIVDTTTLMLEEGIGGLPIINNDEKIVGIVTEGDIVKKLGKLCADLEVQDIMATNVIT 181

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQ-------KAIGIVHFLDLLRF 338
               T +    +++ ++++  + +V + Q       K +G V   D+L++
Sbjct: 182 TTPGTPIEGIAKIMVRNSLRRVPIVGEDQESQSKEEKLLGFVTASDILKY 231



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 57/150 (38%), Gaps = 21/150 (14%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-------QK 262
             KLG L            ++     G P+     I+       V +V E        +K
Sbjct: 159 VKKLGKLCADLEVQDIMATNVITTTPGTPIEGIAKIMVRNSLRRVPIVGEDQESQSKEEK 218

Query: 263 LKGIITEGDIFRNFH-------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           L G +T  DI +                +D+  ++ + +MIK+   + +   L     L+
Sbjct: 219 LLGFVTASDILKYIGDHKLFAKLFSNEGEDVVKVTADQLMIKDVITVSKYDKLGYVADLM 278

Query: 310 RQHNISVLMVVDDC-QKAIGIVHFLDLLRF 338
            + NI  L VVD+   K IGIV   DL++ 
Sbjct: 279 FESNIRGLPVVDEDSGKIIGIVTIRDLIKA 308



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 48/122 (39%), Gaps = 17/122 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN----------- 281
                +I+   ++S+  F  + + D G  KL GI+T  DI   F                
Sbjct: 40  PQSSSIIEIANLMSKNDFRRIPITDPGSGKLLGIVTTMDILDFFGGGKKYNIITDKHKGN 99

Query: 282 -----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   ++++M    K +     +     L+ +  I  L ++++ +K +GIV   D++
Sbjct: 100 FLSAINAPIKEIMTVGVKTMTNTDTIVDTTTLMLEEGIGGLPIINNDEKIVGIVTEGDIV 159

Query: 337 RF 338
           + 
Sbjct: 160 KK 161



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 14/70 (20%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKA 326
           T+GDI              D+  K+     + + +     L+ +++   + + D    K 
Sbjct: 24  TDGDIM-------------DIAAKDVVTAPQSSSIIEIANLMSKNDFRRIPITDPGSGKL 70

Query: 327 IGIVHFLDLL 336
           +GIV  +D+L
Sbjct: 71  LGIVTTMDIL 80


>gi|297566008|ref|YP_003684980.1| putative cyclic nucleotide-regulated nucleotidyltransferase
           [Meiothermus silvanus DSM 9946]
 gi|296850457|gb|ADH63472.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Meiothermus silvanus DSM 9946]
          Length = 606

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 43/106 (40%), Gaps = 6/106 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSV 285
                V  G  +  A  ++ + R   V V+       GI+T+ D+  R   + L     V
Sbjct: 159 RPAVFVPRGYTVQQAAQLMRQHRISSVLVM---GDPVGILTDRDLRNRVLAEGLPPNTPV 215

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E VM    K +   + L  A+  +   +I  L + ++  + IG+V 
Sbjct: 216 EQVMSTPLKTLAASSSLFEALSFMIAQDIHHLPLTEE-GRIIGVVT 260



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +L +  V+ +    +     +  A QL+RQH IS ++V+      +GI+   DL
Sbjct: 149 FSLPIRQVVSRPAVFVPRGYTVQQAAQLMRQHRISSVLVM---GDPVGILTDRDL 200


>gi|254517984|ref|ZP_05130040.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
 gi|226911733|gb|EEH96934.1| conserved hypothetical protein [Clostridium sp. 7_2_43FAA]
          Length = 284

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 72/191 (37%), Gaps = 9/191 (4%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S  +   +  +     L   E  +  +        +EK +     + + G+G S  + 
Sbjct: 92  EDSLEKIIKKVTLKSVSSLEKTEKLIDIKELEDCVEILEKSRN----ICLFGVGASLLVA 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                                A       + ++D+ I++S+SG ++E+       ++   
Sbjct: 148 KDAYLKFLRINKSCCINDDFHAQLLQSINMEKNDVAIIISYSGFTEEMIKCANIVKKIGA 207

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P+IAIT   +S +A  AD  L +         G    +S I QL I D L IA +  RN+
Sbjct: 208 PIIAITRSEESPIAKIADYKLLVAATEHVFREGAI--SSRIAQLNIIDILYIAFVN-RNY 264

Query: 200 SEN--DFYVLH 208
             N   F   H
Sbjct: 265 DSNMKQFNKTH 275


>gi|254380668|ref|ZP_04996034.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194339579|gb|EDX20545.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 144

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 48/114 (42%), Gaps = 4/114 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-T 282
                   +    P+ +    + E   G V VV EG  L+GI+T+ D+  R     L+  
Sbjct: 6   RMSAPAVTIPPRTPVGEVARQMGEYGIGSV-VVTEGGALRGIVTDRDLALRALAGGLDMG 64

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V+ VM      +     +  A +  R+  +  L V+D  Q  +G++   DLL
Sbjct: 65  EAVDAVMTSPVVTVNATDDIHEAYRTFRRTGVRRLPVLDGSQ-VVGMLTVDDLL 117



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           V D M      I   T +    + + ++ I   +VV +     GIV   DL LR 
Sbjct: 3   VSDRMSAPAVTIPPRTPVGEVARQMGEYGIGS-VVVTEGGALRGIVTDRDLALRA 56


>gi|121594368|ref|YP_986264.1| CBS domain-containing protein [Acidovorax sp. JS42]
 gi|120606448|gb|ABM42188.1| CBS domain containing protein [Acidovorax sp. JS42]
          Length = 157

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 46/101 (45%), Gaps = 2/101 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMIKNP 293
               L  A   + E   G + V + G++L G++T+ D + R   ++     + +VM +  
Sbjct: 17  PDDTLTTAAQAMRELNVGALPVCN-GERLVGMVTDRDMVLRGLAEERTHSRLNEVMFREV 75

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               ED  +  A+  +R   +  L VVD  Q+ +GIV   D
Sbjct: 76  YYCYEDQPVDEAIASMRAMQVRRLPVVDRDQRVVGIVSLGD 116



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V DVM +  + +  D  LT A Q +R+ N+  L V  + ++ +G+V   D++  G+
Sbjct: 4   VSDVMTRGIRTMAPDDTLTTAAQAMRELNVGALPVC-NGERLVGMVTDRDMVLRGL 58



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +       P+ +AI  +   +   + VVD  Q++ GI++ GD+  N  +  +  ++
Sbjct: 71  MFREVYYCYEDQPVDEAIASMRAMQVRRLPVVDRDQRVVGIVSLGDVATNVDERQSGTAI 130

Query: 286 EDV 288
            D+
Sbjct: 131 RDI 133


>gi|319891540|ref|YP_004148415.1| 6-phospho-3-hexuloisomerase [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317161236|gb|ADV04779.1| 6-phospho-3-hexuloisomerase [Staphylococcus pseudintermedius
           HKU10-03]
          Length = 182

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 73/186 (39%), Gaps = 12/186 (6%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              +     +R ++   S +  +   QF   V   +A    V +TG G+SG + +  A  
Sbjct: 2   AIQQQFERIRREIAQTLSQVDDQAIAQFEQVVSDAEA----VFVTGKGRSGFVANGFAMR 57

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +  V  A         I + D++IV+S SGS+  LK +   A      +  +T
Sbjct: 58  LNQLGKKAHVVGEATTP-----SIQKGDVLIVISGSGSTTHLKLLADKAHEVGATIALVT 112

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGL-APTTSAIMQLA--IGDALAIALLESRNFSEN 202
           +   S +   A++ L LP   +    G   P  S   Q A  + D + +  + + +  E 
Sbjct: 113 TATDSKIGELANVTLILPAGTKYQTEGSEQPLGSLFEQSAQLMLDGVVLDFMTAWDIDET 172

Query: 203 DFYVLH 208
                H
Sbjct: 173 TMQNNH 178


>gi|259047719|ref|ZP_05738120.1| probable transcriptional regulator YbbH [Granulicatella adiacens
           ATCC 49175]
 gi|259035910|gb|EEW37165.1| probable transcriptional regulator YbbH [Granulicatella adiacens
           ATCC 49175]
          Length = 281

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/170 (15%), Positives = 67/170 (39%), Gaps = 14/170 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGKS 75
           + + +  +  L  L    +  L+                 A+E I   K  V + G+G S
Sbjct: 83  IETFLNPQDSLMGLLQKTENMLTQNIRETFSLLDYHALEKAIEFIHEAKT-VFLLGVGGS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +       +        +          +  + ++D+++V+S++G ++ + +I   A+
Sbjct: 142 SIVCLDFYHKMTRIHQNVMYDRDLHTLMPRIAQLDKNDVVLVISYNGETESVNSIAKVAK 201

Query: 136 RFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
                ++ +T    KS ++  +DI L +P E +    G   + ++++ + 
Sbjct: 202 TMGARIVGVTKYNLKSTLSTLSDIRLFVPVEEKEIRLGSITSRNSLLTIT 251


>gi|253576506|ref|ZP_04853835.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
           D14]
 gi|251844143|gb|EES72162.1| transcriptional regulator [Paenibacillus sp. oral taxon 786 str.
           D14]
          Length = 288

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 42/171 (24%), Positives = 73/171 (42%), Gaps = 5/171 (2%)

Query: 28  LRSII--AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
           L +II    +  + S+E +L      +   AV+ ++A   R+V  GIG SG +       
Sbjct: 99  LDTIIANISRNNMKSIEDTLSVLDRGEVARAVKALRAS-NRIVFFGIGASGLVCQDGEQK 157

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
            +             +      ++ + D+ I +S SG++ E+   L  A++ +   +AIT
Sbjct: 158 FSRINKMCHSYTDGHSQLTAATLLGKGDVAIFVSNSGNTLEIIETLEIAKKNNATTVAIT 217

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             NKS +A  ADI+L +     +   G     S I  L I D L   +  +
Sbjct: 218 KYNKSELADKADILLGISTPEITMRSGA--MGSRIAMLTIIDMLFAGVASA 266


>gi|167839602|ref|ZP_02466286.1| HPP family protein [Burkholderia thailandensis MSMB43]
          Length = 392

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/66 (36%), Positives = 35/66 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + L+  D+M ++P  I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 236 LRAYARTFDELTCADIMSRHPISITPDTPLPAAMTLLDRHRIKALPVVDAHARVVGIVTR 295

Query: 333 LDLLRF 338
            DL + 
Sbjct: 296 ADLSKA 301



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHK 278
                  +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F +
Sbjct: 252 MSRHPISITPDTPLPAAMTLLDRHRIKALPVVDAHARVVGIVTRADLSKAAPYATPGFLR 311

Query: 279 DLNT----------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +L+                VM          T +   + L   H    + VVD   K  G
Sbjct: 312 NLSARLPRSLVGPPFVARAVMSARVHTARTATPIAELVPLFADHGHHHIPVVDADHKLAG 371

Query: 329 IVHFLDLLRFGI 340
           IV   DL+  G+
Sbjct: 372 IVTQADLI-AGL 382


>gi|55377889|ref|YP_135739.1| hypothetical protein rrnAC1071 [Haloarcula marismortui ATCC 43049]
 gi|55230614|gb|AAV46033.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 128

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           V  G P +D    + ++    V +VDE  + +GI+T  D  R      D    +V + M 
Sbjct: 17  VTAGEPALDVAAAMDDQSIKSVVIVDEACQPEGILTSTDYVRMTADGVDPTEATVGEHMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      +T L+     +  +NIS + VVDD  +  GI+   DL 
Sbjct: 77  TDIVTTSPETALSAVASTMWDNNISHVPVVDDENRVTGILSATDLT 122



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 24/58 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  +V D M +    +            +   +I  +++VD+  +  GI+   D +R
Sbjct: 1   MSGATVADCMTEPVLTVTAGEPALDVAAAMDDQSIKSVVIVDEACQPEGILTSTDYVR 58



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 20/55 (36%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           H    I        L    + + +     V VVD+  ++ GI++  D+      D
Sbjct: 74  HMTTDIVTTSPETALSAVASTMWDNNISHVPVVDDENRVTGILSATDLTVYLADD 128


>gi|68445531|dbj|BAE03240.1| inosine monophosphate dehydrogenase [unclutured Candidatus
           Nitrosocaldus sp.]
          Length = 165

 Score = 77.2 bits (189), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMIK 291
            +   + DA+ +++      V V++   +  GI TE D  R    + N L+     VM  
Sbjct: 20  SMHASVKDAVMLMTSSWISSVVVINSNDEPVGIFTEKDAIRAIAWNENALNARLYTVMSS 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +   T L  A+ ++ +  I+ L VV    + +G++   D++RF
Sbjct: 80  PVVTVESTTSLESALNIMVERGINHLPVV-HEGEMVGMITSKDIVRF 125



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 32/59 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++SV+DVM KN K +     +  A+ L+    IS ++V++   + +GI    D +R 
Sbjct: 3   IASISVKDVMSKNVKKMSMHASVKDAVMLMTSSWISSVVVINSNDEPVGIFTEKDAIRA 61



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 31/86 (36%), Gaps = 4/86 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D              + A         +  V+    L  A+ I+ E+    + VV 
Sbjct: 53  FTEKDAIR---AIAWNENALNARLYTVMSSPVVTVESTTSLESALNIMVERGINHLPVVH 109

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS 284
           E  ++ G+IT  DI R   K+     
Sbjct: 110 E-GEMVGMITSKDIVRFITKNRLLAP 134


>gi|229521404|ref|ZP_04410823.1| hypothetical protein VIF_001936 [Vibrio cholerae TM 11079-80]
 gi|229341502|gb|EEO06505.1| hypothetical protein VIF_001936 [Vibrio cholerae TM 11079-80]
          Length = 637

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|229529627|ref|ZP_04419017.1| hypothetical protein VCG_002722 [Vibrio cholerae 12129(1)]
 gi|229333401|gb|EEN98887.1| hypothetical protein VCG_002722 [Vibrio cholerae 12129(1)]
          Length = 637

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPVVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|154482655|ref|ZP_02025103.1| hypothetical protein EUBVEN_00328 [Eubacterium ventriosum ATCC
           27560]
 gi|149736431|gb|EDM52317.1| hypothetical protein EUBVEN_00328 [Eubacterium ventriosum ATCC
           27560]
          Length = 484

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 60/167 (35%), Gaps = 12/167 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       +AIA+            ++H    +         V  S + +  
Sbjct: 41  NIPMMSAGMDTVTEYRMAIAMARQGGIG-----IIHKNMTIEQQADEVDKVKRSENGVIT 95

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
                     + DA  ++++ R   V +V  G+KL GIIT  D+   F  D   L  + +
Sbjct: 96  DPFYLSPEHTIKDANDLMAKFRISGVPIVV-GKKLVGIITNRDLK--FETDETKLIKDSM 152

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +      E   L  A  +L +     L +VDD     G++   D+
Sbjct: 153 TSEGLITAKEGVTLEEAKAILAKSRKEKLPIVDDDFNLKGLITIKDI 199


>gi|114707952|ref|ZP_01440844.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Fulvimarina pelagi HTCC2506]
 gi|114536581|gb|EAU39713.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Fulvimarina pelagi HTCC2506]
          Length = 607

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/174 (14%), Positives = 55/174 (31%), Gaps = 4/174 (2%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            +      A   +  M L +   +   L+         F                     
Sbjct: 88  EDGRALTEARAITETMLLVLPAPMFAQLIADHEPFRAFFSRTPRERPPQRTLANTRIEEL 147

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                        + +A   + +     + +  E  KL GI+T  D+  +   + L+   
Sbjct: 148 MVRGPITCAPDDTVQEAARRMRKHGISSLCMT-EHGKLTGIVTMRDLSGKVVAEGLSPAT 206

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V D++ +NP  +    L +  +  + +  I  L +  +  + +GIV   +L R
Sbjct: 207 PVSDIVTRNPVTLEPSMLGSDVLHTMVERGIGHLPIC-EFGELVGIVTQTNLTR 259



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 12/80 (15%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
            D +  + E+  G + +  E  +L GI+T+ ++ R    D +   V  V    P V   D
Sbjct: 226 SDVLHTMVERGIGHLPIC-EFGELVGIVTQTNLTRW-QADSSADFVSAVASA-PSV---D 279

Query: 300 TLLTVAMQLLRQHNISVLMV 319
            +  +A        I  L+V
Sbjct: 280 QMAEIA------RKIPNLLV 293


>gi|227533401|ref|ZP_03963450.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
 gi|227188967|gb|EEI69034.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Lactobacillus paracasei subsp. paracasei ATCC 25302]
          Length = 300

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 5/184 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
               + KN+T+    + ++ +     SL  ++           +  I     R+++ G+G
Sbjct: 93  DDQEIQKNATLTTIKQKLLIDAN--QSLRETVDQINEANVDTIINLIHQSD-RLLVFGVG 149

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDLIIVLSWSGSSDELKAILY 132
            S      +A      G P  F                   L   +S SG S E+     
Sbjct: 150 ASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVEQTLCWFISNSGESPEVVLAAK 209

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            A++  + +I  T   K+ +  +AD+ +    +P    +  A T S   Q  + D L  A
Sbjct: 210 LAKKAGLQVIVTTKLGKNSLTKYADVSIQTS-QPMEARNHFAATQSLHTQFMLIDILYYA 268

Query: 193 LLES 196
            +  
Sbjct: 269 YVSR 272


>gi|149375101|ref|ZP_01892873.1| inosine-5'-monophosphate dehydrogenase [Marinobacter algicola
           DG893]
 gi|149360465|gb|EDM48917.1| inosine-5'-monophosphate dehydrogenase [Marinobacter algicola
           DG893]
          Length = 487

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEADLAISMAQEGGIG-----IMHKSMSVEQQAAAVRKVKKFESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + + I        + VVD G  L GI+T  DI     +      V ++
Sbjct: 96  DPITVTPDTTVRELVDITMANNISGLPVVD-GVDLVGIVTGRDIRF---ESRLDTPVSEI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E   L    +LL +H I  ++VV+D  +  G++   D+ +  
Sbjct: 152 MTAKDKLVTVKEGANLDDVKELLHRHRIEKVLVVNDDFELRGLITVKDIQKAK 204


>gi|15641304|ref|NP_230936.1| hypothetical protein VC1291 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121586543|ref|ZP_01676329.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121728835|ref|ZP_01681846.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|153819757|ref|ZP_01972424.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|229505122|ref|ZP_04394632.1| hypothetical protein VCF_000328 [Vibrio cholerae BX 330286]
 gi|229511207|ref|ZP_04400686.1| hypothetical protein VCE_002614 [Vibrio cholerae B33]
 gi|229518326|ref|ZP_04407770.1| hypothetical protein VCC_002350 [Vibrio cholerae RC9]
 gi|229608141|ref|YP_002878789.1| hypothetical protein VCD_003059 [Vibrio cholerae MJ-1236]
 gi|254848415|ref|ZP_05237765.1| conserved hypothetical protein [Vibrio cholerae MO10]
 gi|9655778|gb|AAF94450.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549222|gb|EAX59254.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121628882|gb|EAX61339.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126509704|gb|EAZ72298.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|229345041|gb|EEO10015.1| hypothetical protein VCC_002350 [Vibrio cholerae RC9]
 gi|229351172|gb|EEO16113.1| hypothetical protein VCE_002614 [Vibrio cholerae B33]
 gi|229357345|gb|EEO22262.1| hypothetical protein VCF_000328 [Vibrio cholerae BX 330286]
 gi|229370796|gb|ACQ61219.1| hypothetical protein VCD_003059 [Vibrio cholerae MJ-1236]
 gi|254844120|gb|EET22534.1| conserved hypothetical protein [Vibrio cholerae MO10]
          Length = 637

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|54294956|ref|YP_127371.1| hypothetical protein lpl2035 [Legionella pneumophila str. Lens]
 gi|53754788|emb|CAH16275.1| hypothetical protein lpl2035 [Legionella pneumophila str. Lens]
          Length = 148

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 3/117 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           V  +   + +++   PLI+A  +L  +    V + D+   + GI+T  DI R        
Sbjct: 8   VAVAQKRLAIIRDNAPLIEAAKLLDGRHINLVVICDKSGAMVGIVTRTDIVRMMAVCQGC 67

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             T+ VE VM K         LL     +++++N+  + +VD+  K +G+++  D L
Sbjct: 68  GCTVPVETVMTKEVTSCRPSDLLRDVWTIMKENNLLHVPIVDENFKPLGVINARDAL 124



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V  K   +I ++  L  A +LL   +I+++++ D     +GIV   D++R
Sbjct: 10  VAQKRLAIIRDNAPLIEAAKLLDGRHINLVVICDKSGAMVGIVTRTDIVR 59


>gi|28379835|ref|NP_786727.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|28272676|emb|CAD65605.1| transcription regulator [Lactobacillus plantarum WCFS1]
          Length = 282

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++         L      A  ++ A K  V + G+G S  + +         G       
Sbjct: 103 ITHTIDETNRSLDDAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQ 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +    ++ +++++S SG   E   +   A   +IP+I ++    S +   AD
Sbjct: 163 DPHLLAVGMTTQRQNVVLLLISNSGEKSESIRLANLAHSINIPVIVLSRNATSTLGKLAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+L      E+     A TTS + QL + D L
Sbjct: 223 IILINDDSEENQTARAAATTSLMAQLYVVDLL 254


>gi|84489074|ref|YP_447306.1| sugar phosphate isomerase [Methanosphaera stadtmanae DSM 3091]
 gi|84372393|gb|ABC56663.1| predicted sugar phosphate isomerase [Methanosphaera stadtmanae DSM
           3091]
          Length = 194

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 70/186 (37%), Gaps = 21/186 (11%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +++ + +           + I+ ++  + I G+G+SG +    A  L   G   + V 
Sbjct: 11  IENVKKTTETITDENVSKMTKIIEEVES-IFIMGLGRSGLVAKAFAMRLMHLGLNVYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      IT  D +I +S SG +  + +    A+     +IAITS   S +A  +D
Sbjct: 70  ETTTP-----AITDKDCLIAISGSGETSYIISTTGIAKNIGSKIIAITSYPDSTLAQRSD 124

Query: 158 IVLTLPKEPESCPH-------------GLAPTTSAIM--QLAIGDALAIALLESRNFSEN 202
           +VL L    +                  L+P  +      L   D++   +++    +E 
Sbjct: 125 LVLQLQGRTKIDSEPNYARRQISGLHQSLSPMGTIFEISALIFLDSIIAQMMQDLEQTEK 184

Query: 203 DFYVLH 208
           D    H
Sbjct: 185 DLKARH 190


>gi|126179568|ref|YP_001047533.1| Cl- channel, voltage-gated family protein [Methanoculleus
           marisnigri JR1]
 gi|125862362|gb|ABN57551.1| Cl- channel, voltage-gated family protein [Methanoculleus
           marisnigri JR1]
          Length = 754

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 47/122 (38%), Gaps = 2/122 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              DVM   D I  V         + ++         V+D+   L G+I   D+  N   
Sbjct: 594 HVGDVMVPRDRIVAVSPDDTAGRVLHLIDRTLHTGFPVLDKKGSLVGMIALDDVRDNRIN 653

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
             +   VED M      +     L  A+ L+ + +I  L VV  DD ++  G +   D++
Sbjct: 654 GEHDELVEDAMSSRVFTVHHACTLREALDLMTERDIHHLPVVPADDPRELSGFITRTDIM 713

Query: 337 RF 338
           + 
Sbjct: 714 KA 715



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHK 278
           V   C L +A+ +++E+    + VV  D+ ++L G IT  DI + + +
Sbjct: 671 VHHACTLREALDLMTERDIHHLPVVPADDPRELSGFITRTDIMKAYTQ 718


>gi|157164273|ref|YP_001467630.1| nucleotidyl transferase [Campylobacter concisus 13826]
 gi|157101416|gb|ABV23511.1| nucleotidyl transferase [Campylobacter concisus 13826]
          Length = 348

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 1/103 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPK 294
              + DA+  ++        VVDE   L G +T+GDI R     L+   SV  V+ K+P 
Sbjct: 12  NSTIKDALQTINNGGLQIAIVVDENDALVGTVTDGDIRRGLLNGLDLNSSVSLVVHKSPS 71

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +          +++     +  + +VD+  K +GI    D+++
Sbjct: 72  IASVGDTKESILKIALAKKLHKIPLVDELGKLVGIEDIEDIIK 114


>gi|330809809|ref|YP_004354271.1| hypothetical protein [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327377917|gb|AEA69267.1| Conserved hypothetical protein, CBS domain-containing protein
           [Pseudomonas brassicacearum subsp. brassicacearum
           NFM421]
          Length = 146

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           T              +  +     +++A+ I++EK  G + V+ E  ++ G+ +E D  R
Sbjct: 3   TAAQLVRLKSVQNQQVHSIAPEQTVLEALQIMAEKNVGALPVI-EDGQVVGVFSERDYAR 61

Query: 275 NF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +     +V  +M            +   M+++   ++  L V+D+  + IG++ 
Sbjct: 62  KMVLKGRSSVGTTVRTIMSAPVVTADSQQSIDRCMEVMTDSHLRHLPVLDN-GQLIGLLS 120

Query: 332 FLDLLRFGII 341
             DL++  I+
Sbjct: 121 IGDLVKEAIV 130


>gi|300768979|ref|ZP_07078869.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
 gi|300493391|gb|EFK28569.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ATCC 14917]
          Length = 264

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/152 (20%), Positives = 57/152 (37%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++         L      A  ++ A K  V + G+G S  + +         G       
Sbjct: 103 ITHTIDETNRSLDDAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQ 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +    ++ +++++S SG   E   +   A   +IP+I ++    S +   AD
Sbjct: 163 DPHLLAVGMTTQRQNVVLLLISNSGEKSESIRLANLAHSINIPVIVLSRNATSTLGKLAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+L      E+     A TTS + QL + D L
Sbjct: 223 IILINDDSEENQTARAAATTSLMAQLYVVDLL 254


>gi|110802554|ref|YP_697516.1| RpiR family transcriptional regulator [Clostridium perfringens
           SM101]
 gi|169344282|ref|ZP_02865262.1| transcriptional regulator, RpiR family [Clostridium perfringens C
           str. JGS1495]
 gi|110683055|gb|ABG86425.1| transcriptional regulator, RpiR family [Clostridium perfringens
           SM101]
 gi|169297540|gb|EDS79642.1| transcriptional regulator, RpiR family [Clostridium perfringens C
           str. JGS1495]
          Length = 279

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 6/169 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S  + A + + +    L      +  +L        + I   K RV   GIG SG   +
Sbjct: 91  ESVTETANKMLKSSINILEQTVKQIDLDL---MCKCRDLIMNAK-RVYFIGIGYSGIAAT 146

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G  +  V  +        +   DD+I+ +S SG++ E+   +  A+     
Sbjct: 147 DINYKFMRIGFTTVPVTDSHTMVIMSSITNDDDVIVAISNSGTTKEVIKTVKQAKENGTK 206

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +I +T ++ + +   +D  LT          G    +S I Q+ + D L
Sbjct: 207 IITLTEDSDNPLRKLSDYELTYKSAETIFETGSI--SSKIPQIFLLDLL 253


>gi|138896350|ref|YP_001126803.1| acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196249976|ref|ZP_03148671.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
 gi|134267863|gb|ABO68058.1| Acetoin dehydrogenase [Geobacillus thermodenitrificans NG80-2]
 gi|196210490|gb|EDY05254.1| CBS domain containing membrane protein [Geobacillus sp. G11MC16]
          Length = 214

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 9/107 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SVEDVM 289
            + +A+ +L   R   + V+DE   L G++T+ D+          H+ L  L   V  +M
Sbjct: 19  TIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDLRDASPSIFHLHQHLEDLQKPVSTIM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  V      +     L  +H I  L +V +  K +GI+   DLL
Sbjct: 79  KTDIIVGHPLDFVEEVAALFYEHRIGCLPIV-NGGKLVGIITETDLL 124



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE VM  +   +     +  A+QLLR H I  L V+D+    IG+V   DL
Sbjct: 3   VEQVMKTSVITLRATNTIAEALQLLRHHRIRHLPVIDEEGHLIGLVTDRDL 53



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 37/86 (43%), Gaps = 3/86 (3%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           I L+  R+  +    + H    L  L    S +M +   I +      + +   +  E R
Sbjct: 45  IGLVTDRDLRDASPSIFHLHQHLEDLQKPVSTIMKTD--IIVGHPLDFVEEVAALFYEHR 102

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF 276
            GC+ +V+ G KL GIITE D+    
Sbjct: 103 IGCLPIVN-GGKLVGIITETDLLHTL 127


>gi|82617163|emb|CAI64070.1| conserved hypothetical protein [uncultured archaeon]
 gi|268323008|emb|CBH36596.1| conserved hypothetical protein, containing CBS domain [uncultured
           archaeon]
          Length = 131

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 3/109 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+ + + IL  K    +AV     +  G+I+E DI +   KD + L+ EDVM   
Sbjct: 20  VAHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKFMDKDWSILTAEDVMSHF 79

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLLRF 338
            + I  +T L  A   +++ NI  L+V+         IGI+   D+LR 
Sbjct: 80  VRAIDPETTLRKAADTMKELNIHRLLVLSLSPAPGVPIGILSASDILRA 128



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 31/58 (53%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +VM +    +  DT +   +++L + +IS + V     +A+G++  +D+++F
Sbjct: 5   KEKKVREVMTRGVITVAHDTPVNEIVKILVRKDISGIAVTAPDNEAVGVISEIDIIKF 62


>gi|327188328|gb|EGE55546.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
           etli CNPAF512]
          Length = 144

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIK 291
               + +A  ILS+K+ G + VV    ++ G+ TE D+        KD    S+  VM  
Sbjct: 21  PNTTVAEAAVILSKKKIGAIVVVGMENRISGMFTERDLVHAIAKHGKDGLDQSLGQVMTA 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 E+T +   M+L+       + V +   K  GI+   D+++  I
Sbjct: 81  KVYRCHEETTVNELMELMTSRRFRHVPV-ESNGKLAGIISIGDVVKSRI 128



 Score = 39.1 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVVTAGPNTTVAEAAVILSKKKIGAIVVVGMENRISGMFTERDLVHA 61


>gi|323475948|gb|ADX86554.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus REY15A]
 gi|323478664|gb|ADX83902.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus HVE10/4]
          Length = 133

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKD 279
             + +      +     L +A+ ++ ++      V+D   G  + GI+T   I R+  K 
Sbjct: 4   KDVFNNTRPIKITRHTSLSEALELMDKQGIRFALVIDNSKGDDVIGIVTRSIILRSLAKG 63

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    V  VMIKN   I  +  L      + ++NI+ L+ +++  K IG+V   D+L  
Sbjct: 64  VSQNEPVSKVMIKNVITINGEEDLIDTFMFMMRNNITHLLAINETGKIIGVVSMRDVLTA 123


>gi|294495151|ref|YP_003541644.1| hypothetical protein Mmah_0470 [Methanohalophilus mahii DSM 5219]
 gi|292666150|gb|ADE35999.1| CBS domain containing membrane protein [Methanohalophilus mahii DSM
           5219]
          Length = 167

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           +     + D + ++ + RF    VVD+  +LKG+I +  +      D    S        
Sbjct: 40  IDESSSIEDTLELIGKYRFHNFPVVDKDYRLKGVIDQNIVLELLFHDRLPSSSHTHLTAV 99

Query: 285 ------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  + +MI +P  +  DT L   + ++ +HNI+ + VVD+  K IG++   D++
Sbjct: 100 RSLGEDAKSIMIPHPLKVSRDTSLCEGVDMMLKHNINHVWVVDNDDKLIGVITKHDVI 157



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 23/58 (39%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                K   T  + +VM      I E + +   ++L+ ++      VVD   +  G++
Sbjct: 17  RFQISKQCATKKIIEVMTVEVVGIDESSSIEDTLELIGKYRFHNFPVVDKDYRLKGVI 74



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                  V     L + + ++ +     V VVD   KL G+IT+ D+
Sbjct: 110 MIPHPLKVSRDTSLCEGVDMMLKHNINHVWVVDNDDKLIGVITKHDV 156


>gi|288906164|ref|YP_003431386.1| 6-phospho-3-hexuloisomerase [Streptococcus gallolyticus UCN34]
 gi|325979130|ref|YP_004288846.1| 6-phospho-3-hexuloisomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732890|emb|CBI14469.1| putative 6-phospho-3-hexuloisomerase [Streptococcus gallolyticus
           UCN34]
 gi|325179058|emb|CBZ49102.1| 6-phospho-3-hexuloisomerase [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 179

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 41/174 (23%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LS +E ++      +      KI      + + G+G+SG +    A+ L   G     V 
Sbjct: 8   LSDIEKAVNQIDDEKLDDLANKIVNSH-HIFLAGMGRSGLMIRAFANRLMHLGLSVSVVG 66

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H        +DL+I+ S SG +D L +++  A   S+    IT+   S +   ++
Sbjct: 67  DINSPHT-----QPNDLVIIGSGSGETDSLVSLIKKANTLSLDSALITTNLSSTIGRLSN 121

Query: 158 IVLTLPKEPE-SCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           +VL +P + + S   G  P  S   Q    + D L + L++  N S       H
Sbjct: 122 LVLVIPAQNKASEQVGKQPMGSVFEQSSLVLYDILILKLMKILNESNESMVKRH 175


>gi|229515667|ref|ZP_04405126.1| hypothetical protein VCB_003325 [Vibrio cholerae TMA 21]
 gi|229347436|gb|EEO12396.1| hypothetical protein VCB_003325 [Vibrio cholerae TMA 21]
          Length = 637

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|193215453|ref|YP_001996652.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroherpeton thalassium ATCC
           35110]
 gi|193088930|gb|ACF14205.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chloroherpeton thalassium ATCC
           35110]
          Length = 649

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKD 279
            + +  ++        +  A  I++E+  G + +V E +   GIIT+ D+ +      ++
Sbjct: 173 QIRAIKNVVTCSPDISIQKAAKIMAERNVGSIIMVTENRFPIGIITDTDLRKKVVAVEEN 232

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
           + +  V ++M      I  D  +   + L+ +  +    V +D       IG++   D++
Sbjct: 233 IKSRPVSEIMSSPVFTISGDQTVADMIILMMKTGLRHFCVTEDGTAQSSVIGLISEHDIV 292

Query: 337 RF 338
             
Sbjct: 293 TA 294



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            IKN      D  +  A +++ + N+  +++V + +  IGI+   DL R  ++
Sbjct: 176 AIKNVVTCSPDISIQKAAKIMAERNVGSIIMVTENRFPIGIITDTDL-RKKVV 227


>gi|147674424|ref|YP_001216856.1| hypothetical protein VC0395_A0910 [Vibrio cholerae O395]
 gi|146316307|gb|ABQ20846.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|227013208|gb|ACP09418.1| conserved hypothetical protein [Vibrio cholerae O395]
          Length = 637

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|126179738|ref|YP_001047703.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125862532|gb|ABN57721.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 251

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 58/138 (42%), Gaps = 7/138 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  L P            +   S + +       P+    +++    F    VV + + +
Sbjct: 111 FSELFPVLISRRTIPGRVEDAMSREPVTS-TPDEPVHRIYSLIVASGFTAFPVVQKKETI 169

Query: 264 KGIITEGDIFRNFH-----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            GI++  D+ R        K+    +VE VM      +     +  A +L+ +H++S+L 
Sbjct: 170 -GIVSRRDLLRAGSVRTSVKNQADTTVERVMTTPVISVTPGDTIATASRLMVEHDVSMLP 228

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V+D+ ++ +G++   D+L
Sbjct: 229 VIDEKKQLVGVIDRHDVL 246



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 2/113 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVE 286
                V    PL +A   +   R    AVV+E    +G +   ++F     +      VE
Sbjct: 70  REAARVSRDTPLAEAGVAIMNARTNSAAVVNEDGVYQGGVLFSELFPVLISRRTIPGRVE 129

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           D M + P     D  +     L+     +   VV   +  IGIV   DLLR G
Sbjct: 130 DAMSREPVTSTPDEPVHRIYSLIVASGFTAFPVVQKKET-IGIVSRRDLLRAG 181


>gi|20092409|ref|NP_618484.1| hypothetical protein MA3609 [Methanosarcina acetivorans C2A]
 gi|19917664|gb|AAM06964.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 607

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 69/200 (34%), Gaps = 8/200 (4%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ + +            +L L +        L    + ++   + +A+    + +    
Sbjct: 397 MVGMGAVFAGTARAPLTAILILFEITRDYSLILPLMFACVLSNVMSNAIYSESIFTEGLR 456

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVD 258
              F +     K   + +  S ++       +  V     +   I ++   R     V+D
Sbjct: 457 RRGFKIR----KGREVDIMVSMLVKDAMVTHVQTVSEEKNVGTLIALMQASRHAGFPVLD 512

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
              KL GI+T  D+            + D+   + ++   D  L   ++ L    I  L 
Sbjct: 513 SRGKLSGIVTLSDLRSKVKYGEVDKKIGDIATHDVEIAYPDETLEAVLKRLGSKQIGRLP 572

Query: 319 VVD--DCQKAIGIVHFLDLL 336
           VVD  D  K +G++   D++
Sbjct: 573 VVDRMDKTKLLGLITRSDIV 592


>gi|116750105|ref|YP_846792.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116699169|gb|ABK18357.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 146

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 61/128 (47%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   D+MH G  +   +    L +   I+ E     V V+ E  ++ G+I+  +I 
Sbjct: 1   MEGTTRVCDLMHKG--VVFCRPEDNLKEVAGIMKENGLRSVVVMHESGEVWGLISLLEII 58

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIV 330
           R+F +DL  +S E VM      +     +  +++L+++  I  L++VD     ++ IG++
Sbjct: 59  RSFGEDLEGISAESVMQPYKIHVDPQWPIERSIELMKKRRIEHLIIVDPHAGPKRPIGLL 118

Query: 331 HFLDLLRF 338
              D++R+
Sbjct: 119 SSYDIVRY 126


>gi|15897942|ref|NP_342547.1| hypothetical protein SSO1075 [Sulfolobus solfataricus P2]
 gi|13814265|gb|AAK41337.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
          Length = 133

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 53/130 (40%), Gaps = 3/130 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  L +L++           +  V+    L +   ++ E+  G V VV E    KGI T+
Sbjct: 2   GSYLKSLYMLKRVKDFMSTPVFQVEANTSLQEVCKLMLERGVGSV-VVTEQGIPKGIFTD 60

Query: 270 GDIFRNFHKDLNTLS-VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D  +     L++   V       N  ++ ED  +  A++++  + I  L V +     I
Sbjct: 61  RDAVKAIATSLSSSDEVRLAATMGNLIIVDEDIDVFEALKIMAANKIRHLPVKNKDGNII 120

Query: 328 GIVHFLDLLR 337
           G+    D+ +
Sbjct: 121 GMFSITDVYK 130


>gi|320161875|ref|YP_004175100.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
 gi|319995729|dbj|BAJ64500.1| hypothetical protein ANT_24740 [Anaerolinea thermophila UNI-1]
          Length = 148

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V     L+  +  L+EK  G + V+D G+++ GI++E DI R        +    ++  M
Sbjct: 19  VSPDDTLLTTLLKLAEKNVGALLVMD-GERIAGIVSERDIVREIALHRACVLDAPIKAFM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++   +   T +   MQL+ + +I  L VV +  K +GI+   D+++ 
Sbjct: 78  TEDVITVNSQTTVDECMQLMTRAHIRHLPVV-EGGKLVGIISIGDVVKK 125



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             + +  V     + + + +++      + VV EG KL GII+ GD+ +  
Sbjct: 77  MTEDVITVNSQTTVDECMQLMTRAHIRHLPVV-EGGKLVGIISIGDVVKKV 126


>gi|254282962|ref|ZP_04957930.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR51-B]
 gi|219679165|gb|EED35514.1| cyclic nucleotide-binding protein [gamma proteobacterium NOR51-B]
          Length = 624

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           +     +  A   ++ +R     VVD   KL+GI+T+ D+  R     ++ +++V +VM 
Sbjct: 171 IAPEATVQAAAAAMAARRVSSTFVVD-QGKLRGILTDRDLRVRVLAAGVSPSVAVSEVMT 229

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             P+ I     +  A  ++ Q  I  L V     +  G+V   DL+
Sbjct: 230 PQPRSIDAGQSIFAATLMMTQSGIHHLPVT-RDGELAGVVTTSDLI 274


>gi|304437235|ref|ZP_07397195.1| RpiR family transcriptional regulator [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369727|gb|EFM23392.1| RpiR family transcriptional regulator [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 293

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 6/176 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    A +   +   GL      L  E     + AV+ I     RV + G G S  +  
Sbjct: 103 DSYATIAQKMFRSISEGLQDTLKLLDYE---DVNRAVQLICQAH-RVAVYGFGNSATVCH 158

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            + +     G P      +        ++T  D++I +S +G++ EL   +  A+     
Sbjct: 159 DIETRFLRFGIPVQAYSDSHQQITSAALLTGYDVVIAVSHTGTTAELLQSVDVAKASGAR 218

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +I ITS   S +A   DI L          +      S ++ +AI D L + +  +
Sbjct: 219 IIGITSYVHSALAKRTDITL--HGMGREIRYQSESVASRLIHMAIVDLLYMGVAMA 272


>gi|269961701|ref|ZP_06176062.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269833566|gb|EEZ87664.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 629

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 57/145 (39%), Gaps = 14/145 (9%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL- 263
            V                ++      P ++ G  + +A  ++++     + +VD    L 
Sbjct: 137 AVSENNDANDLTTSKVKTLL--TRDAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLD 194

Query: 264 --------KGIITEGDI-FRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                    GIIT+ D+  R   + L+ L  V  VM      +  +  +  AM  + ++N
Sbjct: 195 EDDPQSPVVGIITDRDLCTRVLAEGLSPLDEVSTVMTTEVISLDHNAYVYEAMLTMLRYN 254

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L VV   Q  IGI+   D++R+
Sbjct: 255 VHHLPVV-KDQMPIGIIEATDIVRY 278


>gi|257464677|ref|ZP_05629048.1| putative HTH-type transcriptional regulator [Actinobacillus minor
           202]
 gi|257450337|gb|EEV24380.1| putative HTH-type transcriptional regulator [Actinobacillus minor
           202]
          Length = 299

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +  +L      +   AV+ +K  K R+ I G G SG         L   G     +    
Sbjct: 114 ISETLNLLDFDELEKAVQALKKAK-RIFIFGSGASGLTAEDFKYKLMRIGFQVDAISNNH 172

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++  DD++I +S SG S+E    L  A+      IA+T   +S +   AD VL
Sbjct: 173 FIYMQAVLLKPDDVVIGISHSGYSEETNRGLRLAKANGATTIALTHNLRSPITDVADYVL 232

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            + + QL + D + I L++S
Sbjct: 233 INGNRQGQIQGDSL--GTKMAQLFVLDLIYILLVQS 266


>gi|256810533|ref|YP_003127902.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
 gi|256793733|gb|ACV24402.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
          Length = 279

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 55/134 (41%), Gaps = 2/134 (1%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +    G+     +         +++  +K    + +AI     K  G V +V++  +L  
Sbjct: 68  IREKHGRNFLAAINEPVREIMEENVITLKENADIDEAIETFLTKNVGGVPIVNDDNQLIS 127

Query: 266 IITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +ITE D  R     ++   +++D + ++  V      L    + + ++    L VV +  
Sbjct: 128 LITERDTIRALLNKIDESETIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVSEE- 186

Query: 325 KAIGIVHFLDLLRF 338
           + +GI+   D ++ 
Sbjct: 187 RLVGIITSTDFIKL 200



 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 51/125 (40%), Gaps = 14/125 (11%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------- 279
              + +   G  L D    +    F  + VV E  +L GIIT  D  +    D       
Sbjct: 153 TRDVIVATPGERLKDVARTMVRNGFRRLPVVSEE-RLVGIITSTDFIKLLGGDWAFNQMQ 211

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  + +E++M ++     E   L    + +  ++I  L VVDD  K +GI+   
Sbjct: 212 TGNVREITNVRMEEIMKRDVITAKEGYKLREVAETMINNDIGALPVVDDDLKVVGIITEK 271

Query: 334 DLLRF 338
           D+L++
Sbjct: 272 DVLKY 276



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/131 (20%), Positives = 54/131 (41%), Gaps = 19/131 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIF----------- 273
               +  V     +  A+  ++E ++  + VV+    K+ GIIT  DI            
Sbjct: 8   KNKEVVTVYPTTTIRKALMTMNENKYRRLPVVNPGNNKVVGIITSMDIVNFMGGGSKYNL 67

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 RNF   +N   V ++M +N   + E+  +  A++     N+  + +V+D  + I
Sbjct: 68  IREKHGRNFLAAINE-PVREIMEENVITLKENADIDEAIETFLTKNVGGVPIVNDDNQLI 126

Query: 328 GIVHFLDLLRF 338
            ++   D +R 
Sbjct: 127 SLITERDTIRA 137



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 24/64 (37%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +   K G  L +    +     G + VVD+  K+ GIITE D+ +
Sbjct: 216 REITNVRMEEIMKRDVITAKEGYKLREVAETMINNDIGALPVVDDDLKVVGIITEKDVLK 275

Query: 275 NFHK 278
            F K
Sbjct: 276 YFAK 279


>gi|107099239|ref|ZP_01363157.1| hypothetical protein PaerPA_01000250 [Pseudomonas aeruginosa PACS2]
 gi|116053963|ref|YP_788401.1| CBS domain-containing protein [Pseudomonas aeruginosa UCBPP-PA14]
 gi|296386735|ref|ZP_06876234.1| CBS domain-containing protein [Pseudomonas aeruginosa PAb1]
 gi|313112175|ref|ZP_07797954.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
           39016]
 gi|115589184|gb|ABJ15199.1| putative CBS domain [Pseudomonas aeruginosa UCBPP-PA14]
 gi|310884456|gb|EFQ43050.1| putative CBS domain-containing protein [Pseudomonas aeruginosa
           39016]
          Length = 144

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     ++DA+ +++EK  G + VV+   ++ G+++E D  R      +   
Sbjct: 11  KQNQQVYTIGPDEMVLDALRLMAEKNIGALLVVN-HGEVVGVVSERDYARKMVLKGRSSI 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +M      +     +   M L+   ++  L VV +  + +G++   DL++  I
Sbjct: 70  GTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHLRHLPVV-EDGQLLGLLSIGDLVKAAI 127


>gi|327401358|ref|YP_004342197.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327316866|gb|AEA47482.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 180

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +        L  A   + E   G + VV E  K  GI+TE DI       ++  + 
Sbjct: 11  MTREVCTGNPDETLFSAAKRMLEFGVGSIVVV-EDHKPLGIVTEKDILEKVVAKNRTPSE 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++++M      I   T +  A  ++ +  I  L V+DD    IGIV   D+L
Sbjct: 70  VKLKEIMSYPLITIKPTTSVREAADIMLKRGIRRLPVIDDGD-LIGIVTDTDIL 122



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +D+M +       D  L  A + + +  +  ++VV +  K +GIV   D+L
Sbjct: 4   DIPAKDIMTREVCTGNPDETLFSAAKRMLEFGVGSIVVV-EDHKPLGIVTEKDIL 57



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/129 (13%), Positives = 38/129 (29%), Gaps = 23/129 (17%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T      +   A  +L              P      +  +   +A      +N + ++ 
Sbjct: 17  TGNPDETLFSAAKRMLEFGVGSIVVVEDHKPLGIVTEKDILEKVVA------KNRTPSE- 69

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                                    +  +K    + +A  I+ ++    + V+D+   L 
Sbjct: 70  ---------------VKLKEIMSYPLITIKPTTSVREAADIMLKRGIRRLPVIDD-GDLI 113

Query: 265 GIITEGDIF 273
           GI+T+ DI 
Sbjct: 114 GIVTDTDIL 122


>gi|257053669|ref|YP_003131502.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
 gi|256692432|gb|ACV12769.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
          Length = 384

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P +K    + +   +L E       V  E  KL G+IT+ DI      +L+ L+VE
Sbjct: 71  MQHAPKIKRTGDVRETARVLVESGTKVAPVF-EANKLWGVITDDDILSAVIDNLDALTVE 129

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   +     EDT +   +  LR+H IS + V++D  K  G+V   D++
Sbjct: 130 QIFTGDVVTATEDTEVGQVINKLREHGISRVPVLNDDGKLTGMVTRHDIV 179



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 17/121 (14%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN------------- 281
               +   I  L E     V V+++  KL G++T  DI     +D++             
Sbjct: 141 EDTEVGQVINKLREHGISRVPVLNDDGKLTGMVTRHDIVDVVVRDMDKATTGERAGDVDR 200

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLR 337
              L V DVM         D  +  A++ + +++ + L+V    D     GI+   D+LR
Sbjct: 201 VLDLPVYDVMSSPVATTTIDESVEDAVRRMLENDYAGLVVTPERDDSLVAGIITKTDVLR 260

Query: 338 F 338
            
Sbjct: 261 A 261


>gi|62290164|ref|YP_221957.1| CBS domain-containing protein [Brucella abortus bv. 1 str. 9-941]
 gi|82700086|ref|YP_414660.1| CBS domain-containing protein [Brucella melitensis biovar Abortus
           2308]
 gi|148559815|ref|YP_001259171.1| CBS domain-containing protein [Brucella ovis ATCC 25840]
 gi|189024399|ref|YP_001935167.1| CBS domain protein [Brucella abortus S19]
 gi|254689468|ref|ZP_05152722.1| CBS domain protein [Brucella abortus bv. 6 str. 870]
 gi|254693954|ref|ZP_05155782.1| CBS domain protein [Brucella abortus bv. 3 str. Tulya]
 gi|254697606|ref|ZP_05159434.1| CBS domain protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|254701992|ref|ZP_05163820.1| CBS domain protein [Brucella suis bv. 5 str. 513]
 gi|254706571|ref|ZP_05168399.1| CBS domain protein [Brucella pinnipedialis M163/99/10]
 gi|254710320|ref|ZP_05172131.1| CBS domain protein [Brucella pinnipedialis B2/94]
 gi|254714317|ref|ZP_05176128.1| CBS domain protein [Brucella ceti M644/93/1]
 gi|254717754|ref|ZP_05179565.1| CBS domain protein [Brucella ceti M13/05/1]
 gi|254719307|ref|ZP_05181118.1| CBS domain protein [Brucella sp. 83/13]
 gi|254730497|ref|ZP_05189075.1| CBS domain protein [Brucella abortus bv. 4 str. 292]
 gi|256031814|ref|ZP_05445428.1| CBS domain protein [Brucella pinnipedialis M292/94/1]
 gi|256061334|ref|ZP_05451478.1| CBS domain protein [Brucella neotomae 5K33]
 gi|256113813|ref|ZP_05454606.1| CBS domain protein [Brucella melitensis bv. 3 str. Ether]
 gi|256159989|ref|ZP_05457702.1| CBS domain protein [Brucella ceti M490/95/1]
 gi|256255214|ref|ZP_05460750.1| CBS domain protein [Brucella ceti B1/94]
 gi|256257715|ref|ZP_05463251.1| CBS domain protein [Brucella abortus bv. 9 str. C68]
 gi|256263764|ref|ZP_05466296.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|260168948|ref|ZP_05755759.1| CBS domain protein [Brucella sp. F5/99]
 gi|260546708|ref|ZP_05822447.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
 gi|260754992|ref|ZP_05867340.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260758208|ref|ZP_05870556.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260762035|ref|ZP_05874378.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260884002|ref|ZP_05895616.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|261214246|ref|ZP_05928527.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|261219598|ref|ZP_05933879.1| CBS domain-containing protein [Brucella ceti M13/05/1]
 gi|261222410|ref|ZP_05936691.1| CBS domain-containing protein [Brucella ceti B1/94]
 gi|261314029|ref|ZP_05953226.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261317884|ref|ZP_05957081.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261322093|ref|ZP_05961290.1| CBS domain-containing protein [Brucella ceti M644/93/1]
 gi|261325335|ref|ZP_05964532.1| CBS domain-containing protein [Brucella neotomae 5K33]
 gi|261752559|ref|ZP_05996268.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|261758440|ref|ZP_06002149.1| CBS domain-containing protein [Brucella sp. F5/99]
 gi|265984308|ref|ZP_06097043.1| CBS domain-containing protein [Brucella sp. 83/13]
 gi|265988912|ref|ZP_06101469.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
 gi|265995163|ref|ZP_06107720.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|265998377|ref|ZP_06110934.1| CBS domain-containing protein [Brucella ceti M490/95/1]
 gi|294852589|ref|ZP_06793262.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|306839078|ref|ZP_07471895.1| CBS domain-containing protein [Brucella sp. NF 2653]
 gi|306840280|ref|ZP_07473054.1| CBS domain-containing protein [Brucella sp. BO2]
 gi|306844158|ref|ZP_07476751.1| CBS domain-containing protein [Brucella sp. BO1]
 gi|62196296|gb|AAX74596.1| CBS domain protein [Brucella abortus bv. 1 str. 9-941]
 gi|82616187|emb|CAJ11230.1| CBS domain [Brucella melitensis biovar Abortus 2308]
 gi|148371072|gb|ABQ61051.1| CBS domain protein [Brucella ovis ATCC 25840]
 gi|189019971|gb|ACD72693.1| CBS domain protein [Brucella abortus S19]
 gi|260095758|gb|EEW79635.1| CBS domain-containing protein [Brucella abortus NCTC 8038]
 gi|260668526|gb|EEX55466.1| CBS domain-containing protein [Brucella abortus bv. 4 str. 292]
 gi|260672467|gb|EEX59288.1| CBS domain-containing protein [Brucella abortus bv. 2 str. 86/8/59]
 gi|260675100|gb|EEX61921.1| CBS domain-containing protein [Brucella abortus bv. 6 str. 870]
 gi|260873530|gb|EEX80599.1| CBS domain-containing protein [Brucella abortus bv. 9 str. C68]
 gi|260915853|gb|EEX82714.1| CBS domain-containing protein [Brucella abortus bv. 3 str. Tulya]
 gi|260920994|gb|EEX87647.1| CBS domain-containing protein [Brucella ceti B1/94]
 gi|260924687|gb|EEX91255.1| CBS domain-containing protein [Brucella ceti M13/05/1]
 gi|261294783|gb|EEX98279.1| CBS domain-containing protein [Brucella ceti M644/93/1]
 gi|261297107|gb|EEY00604.1| CBS domain-containing protein [Brucella pinnipedialis B2/94]
 gi|261301315|gb|EEY04812.1| CBS domain-containing protein [Brucella neotomae 5K33]
 gi|261303055|gb|EEY06552.1| CBS domain-containing protein [Brucella pinnipedialis M163/99/10]
 gi|261738424|gb|EEY26420.1| CBS domain-containing protein [Brucella sp. F5/99]
 gi|261742312|gb|EEY30238.1| CBS domain-containing protein [Brucella suis bv. 5 str. 513]
 gi|262552845|gb|EEZ08835.1| CBS domain-containing protein [Brucella ceti M490/95/1]
 gi|262766276|gb|EEZ12065.1| CBS domain-containing protein [Brucella melitensis bv. 3 str.
           Ether]
 gi|263093864|gb|EEZ17826.1| CBS domain-containing protein [Brucella melitensis bv. 2 str. 63/9]
 gi|264661109|gb|EEZ31370.1| CBS domain-containing protein [Brucella pinnipedialis M292/94/1]
 gi|264662900|gb|EEZ33161.1| CBS domain-containing protein [Brucella sp. 83/13]
 gi|294821178|gb|EFG38177.1| inosine-5'-monophosphate dehydrogenase [Brucella sp. NVSL 07-0026]
 gi|306275433|gb|EFM57170.1| CBS domain-containing protein [Brucella sp. BO1]
 gi|306289807|gb|EFM60989.1| CBS domain-containing protein [Brucella sp. BO2]
 gi|306405625|gb|EFM61887.1| CBS domain-containing protein [Brucella sp. NF 2653]
 gi|326409275|gb|ADZ66340.1| CBS domain protein [Brucella melitensis M28]
 gi|326538985|gb|ADZ87200.1| CBS domain containing protein [Brucella melitensis M5-90]
          Length = 143

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 5/127 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +    ++ +     +V      L  A+ +L++ + G + V DE   ++GI++E D+ R  
Sbjct: 1   MTVRSILETKGRDVVVIASADTLSQAVAMLNKHKIGALVVCDEAGHIEGILSERDVVRAL 60

Query: 277 HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                   + SV +VM    +V  E   +   M+++ +     + V ++  K +GI+   
Sbjct: 61  AAQESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIG 119

Query: 334 DLLRFGI 340
           D+++  I
Sbjct: 120 DVVKRRI 126



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +  +  S        + +      +   + I++  RF  + V +EG KL GII+ GD+ 
Sbjct: 64  ESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIGDVV 122

Query: 274 RNFHKDLNTLSVEDV 288
           +   +D+     ED+
Sbjct: 123 KRRIEDV-EREAEDI 136


>gi|163938642|ref|YP_001643526.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
 gi|229056489|ref|ZP_04195897.1| CBS domain protein [Bacillus cereus AH603]
 gi|229131671|ref|ZP_04260548.1| CBS domain protein [Bacillus cereus BDRD-ST196]
 gi|229165662|ref|ZP_04293430.1| CBS domain protein [Bacillus cereus AH621]
 gi|163860839|gb|ABY41898.1| putative signal-transduction protein with CBS domains [Bacillus
           weihenstephanensis KBAB4]
 gi|228617663|gb|EEK74720.1| CBS domain protein [Bacillus cereus AH621]
 gi|228651725|gb|EEL07685.1| CBS domain protein [Bacillus cereus BDRD-ST196]
 gi|228720814|gb|EEL72369.1| CBS domain protein [Bacillus cereus AH603]
          Length = 139

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + V+ E +++ G++T+ D+       K   + 
Sbjct: 8   MSTHIVHCTPLDNVYEAAVKMKEESVGLIPVI-ENKQVVGLVTDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  +  A +L+ Q+ I  L VV +  + +G++   DL
Sbjct: 67  QITNVMTTNIVSVSPDDSIEKATELMAQYQIRRLPVV-ESGQLVGMLALGDL 117



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V ++M  +         +  A   +++ ++ ++ V+ + ++ +G+V   DL+  GI
Sbjct: 2   TQVRELMSTHIVHCTPLDNVYEAAVKMKEESVGLIPVI-ENKQVVGLVTDRDLVVRGI 58


>gi|319651833|ref|ZP_08005958.1| hypothetical protein HMPREF1013_02570 [Bacillus sp. 2_A_57_CT2]
 gi|317396485|gb|EFV77198.1| hypothetical protein HMPREF1013_02570 [Bacillus sp. 2_A_57_CT2]
          Length = 439

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 34/128 (26%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++        +K    + D +T   E       VVD   K++G++T  
Sbjct: 182 QLIKKEIVLVEDILTPLKEAIFLKTTDTIADWLTYNRETGHSRFPVVDSNLKVQGVVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI      D  TL +E +M KNP  +   T +  +  ++    I +L VVD+  K  GIV
Sbjct: 242 DI---MGHDKETL-IEKIMTKNPMTVGGKTSVASSSHMMVWEGIELLPVVDEANKLEGIV 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|167616147|ref|ZP_02384782.1| HPP family protein [Burkholderia thailandensis Bt4]
 gi|257142727|ref|ZP_05590989.1| HPP family protein [Burkholderia thailandensis E264]
          Length = 392

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 236 LRAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTR 295

Query: 333 LDLLRF 338
            DL + 
Sbjct: 296 ADLSKA 301



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHK 278
                  +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F +
Sbjct: 252 MSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTRADLSKAAPYATPGFLR 311

Query: 279 DLN----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            L+                VM      +   T +   + L   H    + VVD   +  G
Sbjct: 312 GLSARLPRSLVGPAFVARAVMSTRVHTVRPATPIAELVPLFADHGHHHIPVVDAEHRLAG 371

Query: 329 IVHFLDLLRFGI 340
           IV   DL+  G+
Sbjct: 372 IVTQADLI-AGL 382


>gi|187926611|ref|YP_001892956.1| putative signal-transduction protein with CBS domains [Ralstonia
           pickettii 12J]
 gi|241666122|ref|YP_002984481.1| signal transduction protein with CBS domains [Ralstonia pickettii
           12D]
 gi|309782719|ref|ZP_07677440.1| hypothetical protein HMPREF1004_04074 [Ralstonia sp. 5_7_47FAA]
 gi|187728365|gb|ACD29529.1| putative signal-transduction protein with CBS domains [Ralstonia
           pickettii 12J]
 gi|240868149|gb|ACS65809.1| putative signal transduction protein with CBS domains [Ralstonia
           pickettii 12D]
 gi|308918497|gb|EFP64173.1| hypothetical protein HMPREF1004_04074 [Ralstonia sp. 5_7_47FAA]
          Length = 155

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIF---R 274
                    I  V+    L  A  ++ ++    + V +    G ++ GI+T+ D+     
Sbjct: 2   RVDEICSHRIVHVQATATLQQAARLMRDESARALLVTEHAAGGSRVVGIVTDRDMVVHGL 61

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D +  +V +VM +    I +D +++ A++ +  H +  L VVD  Q+ +G++   D
Sbjct: 62  ASRSDCSQTAVSEVMTRGLLTIHDDAVISEALRSMLSHGLHRLAVVDRQQRLVGMLSLDD 121

Query: 335 LLRF 338
            +R 
Sbjct: 122 TIRA 125


>gi|20093428|ref|NP_619503.1| hypothetical protein MA4649 [Methanosarcina acetivorans C2A]
 gi|19918802|gb|AAM07983.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 333

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 1/101 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
                DA+T + E+R G + +V++  ++  I TE +        +   +V++ M KN  +
Sbjct: 154 QADFKDAVTTMLERRTGGLPIVNDEMQVIAIFTERNAVELMGGIVTNKTVDEYMTKNVTM 213

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  DT +  A +++ Q+    L VV       GIV   D++
Sbjct: 214 VTTDTPIGQAAKVMVQNRFRRLPVV-KDGIFAGIVTASDIV 253



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 53/147 (36%), Gaps = 15/147 (10%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F   +    +G +    +   +   ++ +V    P+  A  ++ + RF  + VV +    
Sbjct: 185 FTERNAVELMGGIVTNKTVDEYMTKNVTMVTTDTPIGQAAKVMVQNRFRRLPVV-KDGIF 243

Query: 264 KGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            GI+T  DI     +                   V  ++ +        T +  AM+++ 
Sbjct: 244 AGIVTASDIVHFLGRGDAFSKLTTGNIHEALDQPVGSIVSQELIWTSPGTDMGKAMEIML 303

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  I  L V+ +     GI+   D LR
Sbjct: 304 EKKIGSLPVL-EDGMLRGIITESDFLR 329



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 17/115 (14%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVE------ 286
                +++A+ I++E+RF  + + D G  +L+G++T  DI          L VE      
Sbjct: 72  PPTAAIMEAVRIMTERRFRRIPITDAGTGRLEGVVTSVDIIDFLGGGSRNLLVENRFKGN 131

Query: 287 ----------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                      +M  +   + +      A+  + +     L +V+D  + I I  
Sbjct: 132 LLAAINEEVRQIMQTDVAYLNDQADFKDAVTTMLERRTGGLPIVNDEMQVIAIFT 186



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 5/54 (9%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
            +  +  ++   +     +  A++++ +     + + D    +  G+V  +D++
Sbjct: 59  KILALATRDVVTLPPTAAIMEAVRIMTERRFRRIPITDAGTGRLEGVVTSVDII 112



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  +  A+ I+ EK+ G + V+ E   L+GIITE D  R F 
Sbjct: 290 SPGTDMGKAMEIMLEKKIGSLPVL-EDGMLRGIITESDFLRGFD 332


>gi|196234157|ref|ZP_03132990.1| Chloride channel core [Chthoniobacter flavus Ellin428]
 gi|196221808|gb|EDY16345.1| Chloride channel core [Chthoniobacter flavus Ellin428]
          Length = 580

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 40/124 (32%), Positives = 59/124 (47%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNFH-KD 279
            G+ IP++    PL +    ++       R     +VDE Q+L GIIT  D+ R    + 
Sbjct: 433 MGEEIPMISAATPLREYSARIAASDPALSRRQGTLLVDEQQRLVGIITRSDVVRALEQRS 492

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLR 337
           L TL+V +   +NP V   D  L  A+  + +HN+  L VVD  D  K +G      L R
Sbjct: 493 LETLTVLEAGTRNPVVTFADETLYDAIAKMLKHNLGRLPVVDRHDVNKVVGY-----LGR 547

Query: 338 FGII 341
            GI+
Sbjct: 548 AGIL 551


>gi|295399513|ref|ZP_06809495.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|312109929|ref|YP_003988245.1| GntR family transcriptional regulator [Geobacillus sp. Y4.1MC1]
 gi|294978979|gb|EFG54575.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus thermoglucosidasius C56-YS93]
 gi|311215030|gb|ADP73634.1| putative signal transduction protein with CBS and DRTGG domains
           [Geobacillus sp. Y4.1MC1]
          Length = 437

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 74/194 (38%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T  ++  +   A +++T   + E     LA      +     D   +A + +R   +   
Sbjct: 125 TKAHERALKEGAAVLITGGFDTEDYVKKLADELQLPIISTSYDTFTVATMINRAIYD--- 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   +    V   D++   +    +    P+     +  E +     VVD+  K++
Sbjct: 182 ------QLIKKEIVLVEDILIPLEKTAYLYTTDPVERWYELNRETKHSRFPVVDQQLKVQ 235

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI T  D+      D   L +E  M K+P  +   T +  A  ++    I +L VVD+  
Sbjct: 236 GIATAKDV---LDFD-RQLPIEKAMTKHPITVKGKTSVASASHIMVWEGIELLPVVDEYN 291

Query: 325 KAIGIVHFLDLLRF 338
           +  GI+   D+L+ 
Sbjct: 292 RLQGIISRQDVLKA 305


>gi|319936009|ref|ZP_08010432.1| 3-hexulose-6-phosphate isomerase [Coprobacillus sp. 29_1]
 gi|319808959|gb|EFW05466.1| 3-hexulose-6-phosphate isomerase [Coprobacillus sp. 29_1]
          Length = 180

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 73/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LS L        +   +  ++ I  I   + +TG G+SG +    A+ L   G     V 
Sbjct: 9   LSELTEVNNQLNTSDIYKLIDLI-DISNHIYLTGAGRSGLMIRSFANRLLHLGYNISVVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+++ S SG +  L +    A++  + +  IT+ + S +A  AD
Sbjct: 68  EISSPHTH-----PGDLLLISSGSGETKSLISQAEIAKQNGLKVALITTSSISSLAKLAD 122

Query: 158 IVLTLPKEPESCP-HGLAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
           IVL +P + +      + P  +   Q  L + D++ + ++  +N +       H
Sbjct: 123 IVLLIPVQSKDTNGETIQPMGTLFEQYTLILYDSIVLNIMGLKNQTNETMKARH 176


>gi|27468809|ref|NP_765446.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           ATCC 12228]
 gi|27316357|gb|AAO05532.1|AE016750_137 transcription regulator RpiR family [Staphylococcus epidermidis
           ATCC 12228]
 gi|329738037|gb|EGG74259.1| SIS domain protein [Staphylococcus epidermidis VCU045]
          Length = 290

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +           + IK  +  + 
Sbjct: 77  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETINVAIIDEICDLIKNSET-IF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 134 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 194 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 252

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 253 LYYRYIALNYQSSLDF 268


>gi|332305652|ref|YP_004433503.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
 gi|332172981|gb|AEE22235.1| N-acetylneuraminate synthase [Glaciecola agarilytica 4H-3-7+YE-5]
          Length = 753

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/111 (29%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKD 279
            ++    +  +V+    L DA+  L+E +   + VVD  +KLKG  T+GD  R     K+
Sbjct: 1   MIVDKDLAKYIVETQVTLSDALVKLNENKLQILFVVDSQRKLKGAFTDGDFRRWVLNQKN 60

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +N  L V   M KN + + ED    + ++ L +  +  L +VD+  K I I
Sbjct: 61  INIQLPVAQAMNKNCQSVFEDVEHNIVIEHLNE-KVRYLPIVDNNAKLIAI 110


>gi|240949259|ref|ZP_04753603.1| putative HTH-type transcriptional regulator [Actinobacillus minor
           NM305]
 gi|240296375|gb|EER47019.1| putative HTH-type transcriptional regulator [Actinobacillus minor
           NM305]
          Length = 299

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 61/156 (39%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +  +L      +   AV+ +K  K R+ I G G SG         L   G     +    
Sbjct: 114 ISETLNLLDFDELEKAVQALKKAK-RIFIFGSGASGLTAEDFKYKLMRIGFQVDAISNNH 172

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++  DD++I +S SG S+E    L  A+      IA+T   +S +   AD VL
Sbjct: 173 FIYMQAVLLKPDDVVIGISHSGYSEETNRGLRLAKANGATTIALTHNLRSPITDVADYVL 232

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            + + QL + D + I L++S
Sbjct: 233 INGNRQGQIQGDSL--GTKMAQLFVLDLIYILLVQS 266


>gi|145589604|ref|YP_001156201.1| inositol-5-monophosphate dehydrogenase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
 gi|145048010|gb|ABP34637.1| inosine-5'-monophosphate dehydrogenase [Polynucleobacter
           necessarius subsp. asymbioticus QLW-P1DMWA-1]
          Length = 487

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 38/168 (22%), Positives = 62/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+             L P  +   +                
Sbjct: 40  NTPLVSAAMDTVTEGRLAIAMASEGGIGIIH-KNLTPAEQAREVAKVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L   I +  E  F    V+  G+++ GIIT  D+   F +DL    V+  M   
Sbjct: 99  IGPDVTLRQVIQLSREHGFSGFPVL-TGKEVVGIITNRDLR--FEEDL-DAPVKTKMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ QH +  ++VV+D  +  G++   D+L+ 
Sbjct: 155 ERLVTVKEGCSLEEAKRLMSQHRLERVLVVNDRFELRGLITVKDILKA 202


>gi|91773709|ref|YP_566401.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712724|gb|ABE52651.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 315

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 16/127 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTL- 283
           +   +  +     +IDAI I++EK+F  + + + G  K++GIIT  DI      D + L 
Sbjct: 47  ATKHVITIPPTTKIIDAIKIMTEKKFRHIPITNAGTNKIEGIITSFDIIDFLGGDKSQLI 106

Query: 284 --------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                         ++  +M  +   I     +  A +L+ +HNI  L VVD      GI
Sbjct: 107 ENKYKGNLLAAINANISSIMQPHVVSIHSTGNIKEAFELMLKHNIGSLPVVDSTDHVCGI 166

Query: 330 VHFLDLL 336
               D L
Sbjct: 167 CTEKDFL 173



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 69/196 (35%), Gaps = 9/196 (4%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL-ESRNFSEN 202
           I+     +++     V+T+P   +        T      + I +A    +     +F   
Sbjct: 36  ISEHEGDIMSVATKHVITIPPTTKIIDAIKIMTEKKFRHIPITNAGTNKIEGIITSFDII 95

Query: 203 DFYVLHPGGKLGTLFV-----CASDVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVA 255
           DF        +   +        +  + S     +V I     + +A  ++ +   G + 
Sbjct: 96  DFLGGDKSQLIENKYKGNLLAAINANISSIMQPHVVSIHSTGNIKEAFELMLKHNIGSLP 155

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD    + GI TE D           +S+   M K  +    D  +  A +++ ++N  
Sbjct: 156 VVDSTDHVCGICTEKDFLTFASGLPTNMSIAGHMSKKVEKASSDMKIGEAAKVMVKNNFR 215

Query: 316 VLMVVDDCQKAIGIVH 331
            L VV      IG+V+
Sbjct: 216 RLPVV-KKGILIGVVN 230



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 28/152 (18%), Positives = 52/152 (34%), Gaps = 20/152 (13%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF     G              H    +        + +A  ++ +  F  + VV +
Sbjct: 168 TEKDFLTFASGLPTNMSIA-----GHMSKKVEKASSDMKIGEAAKVMVKNNFRRLPVV-K 221

Query: 260 GQKLKGIITEGDIFRNFHKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAM 306
              L G++    I   F                   + +  ++ K+      DT L  A 
Sbjct: 222 KGILIGVVNASAIMNFFGSGEVFENLVTGNFHEAMDVPISSLVSKDVVWTTSDTDLGEAS 281

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+ +H +  L ++D+  K  GI+   D+LR 
Sbjct: 282 SLMLKHGVGSLPIIDN-GKLCGIITERDVLRA 312



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              L +A +++ +   G + ++D   KL GIITE D+ R   +
Sbjct: 274 DTDLGEASSLMLKHGVGSLPIID-NGKLCGIITERDVLRAIAE 315


>gi|19347824|gb|AAL86324.1| unknown protein [Arabidopsis thaliana]
          Length = 585

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 52/142 (36%), Gaps = 23/142 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL +    C+ VVD+   L GI+T GDI 
Sbjct: 413 ETILEDLKVMRVMSKNYVKVSSGTTLREARNILKKSHQNCIMVVDDDDFLAGILTHGDIR 472

Query: 274 RNFHK------DLNTLSVEDVMIK---------NPKVILEDTLLTVAMQLLRQHNISVLM 318
           R          D NT  V  V  K                D  + VA +L+    +  L 
Sbjct: 473 RYLSNNASTILDENTCPVSSVCTKKISYRGQERGLLTCYPDATVGVAKELMEARGVKQLP 532

Query: 319 VVD--------DCQKAIGIVHF 332
           VV           +K +G++H+
Sbjct: 533 VVKRGEVIHKGKRRKLLGLLHY 554



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +   T L  A  +L++ + + +MVVDD     GI+   D+ R+
Sbjct: 416 LEDLKVMRVMSKNYVKVSSGTTLREARNILKKSHQNCIMVVDDDDFLAGILTHGDIRRY 474


>gi|325968127|ref|YP_004244319.1| CBS domain-containing protein [Vulcanisaeta moutnovskia 768-28]
 gi|323707330|gb|ADY00817.1| CBS domain-containing protein [Vulcanisaeta moutnovskia 768-28]
          Length = 255

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
           +  S   +     L  A+  +       + +  E  KL G+I+  DI ++  K       
Sbjct: 135 ANKSPICINEEVTLRTAMETMISHGIRHLLIT-EQDKLLGVISVKDILKHVIKYYKLRGQ 193

Query: 282 ---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +++  +M  NP  I     L  A++L+R++NIS L +V +  K +G++   D+++
Sbjct: 194 VDLNITISKLMSHNPVTIDSGASLIDAIKLMRRNNISSLPIV-EMGKLMGLITEHDIVK 251



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 3/127 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G   +      H  D   +       +  I  +         ++ +   L GIITE D
Sbjct: 58  NNGVNALKEPVAKHGSDKFIIASPDDDAVMVIKKMLNNNVDAALILRDND-LTGIITERD 116

Query: 272 IFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +     + L     V +V  K+P  I E+  L  AM+ +  H I  L++  +  K +G++
Sbjct: 117 VVSKMPEQLFIKYRVHEVANKSPICINEEVTLRTAMETMISHGIRHLLIT-EQDKLLGVI 175

Query: 331 HFLDLLR 337
              D+L+
Sbjct: 176 SVKDILK 182



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +   +  G  LIDAI ++       + +V E  KL G+ITE DI +N  K
Sbjct: 204 MSHNPVTIDSGASLIDAIKLMRRNNISSLPIV-EMGKLMGLITEHDIVKNMIK 255


>gi|304438192|ref|ZP_07398134.1| transcriptional regulator [Selenomonas sp. oral taxon 149 str.
           67H29BP]
 gi|304368799|gb|EFM22482.1| transcriptional regulator [Selenomonas sp. oral taxon 149 str.
           67H29BP]
          Length = 282

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 70/172 (40%), Gaps = 6/172 (3%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +L+   +     AV++I    GR+ + G G S  +   + +     G        A 
Sbjct: 109 LQDTLKLLDAAALERAVDQICRA-GRIAVYGFGNSATVCRDIETRFLRFGMVVQAYSDAH 167

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  ++T  D++I +S +GS+ EL   +  AR     +IAITS   + +   +++VL
Sbjct: 168 QQATSASLLTPHDVVIAVSHTGSTLELLDSVRIARAAGAVVIAITSHANAPLTKLSNVVL 227

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
                     +     +S ++ +AI DAL   +      +  ++       +
Sbjct: 228 --HGMGRETHYSSEAISSRLIHMAIADALYTVIAMR---NPQEYRRNLQKMR 274


>gi|296332131|ref|ZP_06874594.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305672871|ref|YP_003864542.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
 gi|296150623|gb|EFG91509.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411114|gb|ADM36232.1| putative transcriptional regulator [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 283

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 28/158 (17%), Positives = 61/158 (38%), Gaps = 2/158 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             + +++ +       +   AV  +      V   G+G SG +              +  
Sbjct: 103 NAIQAIQDTSDLMDYKELERAVSLLLKAHT-VHFIGVGASGIVAKDAQQKWLRIHKQATA 161

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                     +    +DD++  +S+SG + E+  ++  A+   I  I++T  +++ V+  
Sbjct: 162 FTDTHLVASLIANADKDDIVFAISFSGETQEIIELITMAKEKGITTISLTQFSQTSVSAL 221

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           AD+ L             A T+S + QL + D L + +
Sbjct: 222 ADVPLYTTH-SNEALIRSAATSSRLAQLFMIDVLFLGM 258


>gi|89895037|ref|YP_518524.1| hypothetical protein DSY2291 [Desulfitobacterium hafniense Y51]
 gi|89334485|dbj|BAE84080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 873

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)

Query: 211 GKLGTLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G+L       + V       +  V     L +   IL +     V V  +G+KL GII+ 
Sbjct: 295 GELAQQAHRINRVRDIMSYPVKTVSPEMKLSEVEQILLKYGHTGVPV-AQGEKLVGIISR 353

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+ +     L    V+  M K+  V+  D+      + + QH+I  + V+++  K  GI
Sbjct: 354 RDVDKAIKHGLAHAPVKGFMTKDVVVVEADSSWEDVQRTMVQHDIGRVPVLEE-GKLAGI 412

Query: 330 VHFLDLLRF 338
           V   D+LR 
Sbjct: 413 VSRSDILRI 421



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 17/128 (13%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A         + +V+      D    + +   G V V+ E  KL GI++  
Sbjct: 358 KAIKHGLAHAPVKGFMTKDVVVVEADSSWEDVQRTMVQHDIGRVPVL-EEGKLAGIVSRS 416

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLM-----VVDDC 323
           DI R  H   + +  E  + ++        +    + LL +    I  L+     V D+ 
Sbjct: 417 DILRIIHG--SAVPTEMSLTRH----RSLAMREDILGLLEELPEQIRSLLAAAQQVADEL 470

Query: 324 QK---AIG 328
                 +G
Sbjct: 471 GYSVFVVG 478


>gi|219669447|ref|YP_002459882.1| polynucleotide adenylyltransferase region [Desulfitobacterium
           hafniense DCB-2]
 gi|219539707|gb|ACL21446.1| Polynucleotide adenylyltransferase region [Desulfitobacterium
           hafniense DCB-2]
          Length = 873

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 55/129 (42%), Gaps = 3/129 (2%)

Query: 211 GKLGTLFVCASDVM-HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G+L       + V       +  V     L +   IL +     V V  +G+KL GII+ 
Sbjct: 295 GELAQQAHRINRVRDIMSYPVKTVSPEMKLSEVEQILLKYGHTGVPV-AQGEKLVGIISR 353

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+ +     L    V+  M K+  V+  D+      + + QH+I  + V+++  K  GI
Sbjct: 354 RDVDKAIKHGLAHAPVKGFMTKDVVVVEADSSWEDVQRTMVQHDIGRVPVLEE-GKLAGI 412

Query: 330 VHFLDLLRF 338
           V   D+LR 
Sbjct: 413 VSRSDILRI 421



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 43/128 (33%), Gaps = 17/128 (13%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +      A         + +V+      D    + +   G V V+ E  KL GI++  
Sbjct: 358 KAIKHGLAHAPVKGFMTKDVVVVEADSSWEDVQRTMVQHDIGRVPVL-EEGKLAGIVSRS 416

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLM-----VVDDC 323
           DI R  H   + +  E  + ++        +    + LL +    I  L+     V D+ 
Sbjct: 417 DILRIIHG--SAVPTEMSLTRH----RSLAMREDILGLLEELPEQIRSLLAAAQQVADEL 470

Query: 324 QK---AIG 328
                 +G
Sbjct: 471 GYSVFVVG 478


>gi|242243881|ref|ZP_04798324.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|242232655|gb|EES34967.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|319400688|gb|EFV88913.1| helix-turn-helix domain, rpiR family protein [Staphylococcus
           epidermidis FRI909]
          Length = 290

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 80/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +   +       + IK  +  + 
Sbjct: 77  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETINAAIIDEICDLIKKSET-IF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 134 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 194 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 252

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 253 LYYRYIALNYQSSLDF 268


>gi|134046651|ref|YP_001098136.1| signal transduction protein [Methanococcus maripaludis C5]
 gi|132664276|gb|ABO35922.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C5]
          Length = 303

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 57/104 (54%), Gaps = 1/104 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA  +L++     + V+D G+KL G+++  D+     + L   +V ++M + 
Sbjct: 184 ITPEKTIRDAAKLLADANISGIPVMD-GKKLLGVLSLHDVAEAVSRGLENENVTELMAEK 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + ++  +  A+ L+ ++N+  L+VVD+ + A+GI+   D+L
Sbjct: 243 IYTVSKNEKIYDALILMEKYNVGRLIVVDNEEYAVGILTRTDIL 286



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV DV IK     I  +  +  A +LL   NIS + V+D  +K +G++   D+   
Sbjct: 171 SVGDVGIKEKLIYITPEKTIRDAAKLLADANISGIPVMD-GKKLLGVLSLHDVAEA 225



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 25/70 (35%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +       +      + I  V     + DA+ ++ +   G + VVD  +   GI+T  D
Sbjct: 225 AVSRGLENENVTELMAEKIYTVSKNEKIYDALILMEKYNVGRLIVVDNEEYAVGILTRTD 284

Query: 272 IFRNFHKDLN 281
           I       + 
Sbjct: 285 ILNLIEGTIF 294


>gi|293368363|ref|ZP_06614989.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis M23864:W2(grey)]
 gi|291317495|gb|EFE57915.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus epidermidis M23864:W2(grey)]
          Length = 286

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 43/196 (21%), Positives = 79/196 (40%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT+    L+ N +       + +  +   +L ++ +           + IK  +  + 
Sbjct: 73  KEVTQYNVELVDNESTISLKNKLHSRSKA--ALSNANETINVAIIDEICDLIKNSET-IF 129

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     VH        L     +D +I +S +G+  E++
Sbjct: 130 IYGYGASFVVATDLYQKLSRIGLNIQLVHETHIFTTMLATRNSNDCVIFISNNGTQSEMQ 189

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP+  I+S + + VA  ++IVLT   + +     +  TTS   Q+   D 
Sbjct: 190 SIAKVIADYHIPIATISSTSDNPVAKQSNIVLTYG-QTDENEMRMGATTSLFAQMFTIDI 248

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 249 LYYRYIALNYQSSLDF 264


>gi|118595092|ref|ZP_01552439.1| CBS [Methylophilales bacterium HTCC2181]
 gi|118440870|gb|EAV47497.1| CBS [Methylophilales bacterium HTCC2181]
          Length = 150

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V+    + DA+TI+++ + G + V+ +G K+ GII+E D  R      +      V+++M
Sbjct: 26  VEPARSIFDALTIMAQYKIGALIVM-KGSKMVGIISERDYAREIFIEGRSSRDTKVQEIM 84

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K    +  D      + ++ +  I  L V+   ++ +G+V   DL++ 
Sbjct: 85  TKKVLTLSADDKFDKGLDIMTKKRIRHLPVM-HGKELVGMVSQGDLVKE 132



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 27/61 (44%), Gaps = 6/61 (9%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R   + LN   ++++       +     +  A+ ++ Q+ I  L+V+    K +GI+   
Sbjct: 9   RTVLEILNEKDIKEI-----VTVEPARSIFDALTIMAQYKIGALIVM-KGSKMVGIISER 62

Query: 334 D 334
           D
Sbjct: 63  D 63


>gi|71908483|ref|YP_286070.1| CBS [Dechloromonas aromatica RCB]
 gi|71848104|gb|AAZ47600.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 146

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
                +  A  ++++K+ G + VV E  ++ GI TE D          D +  +++ VM+
Sbjct: 19  SKTMSVRSACRLMTDKKIGALLVV-ENGRIAGIFTERDALNKILSAALDPDATTLDQVMV 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++P+ I  D  L+ A+ ++ +     + VVD     +G+V   D L
Sbjct: 78  RDPQTIGADKPLSYALYMMAEGGFRHVPVVDPSGAPLGMVSARDAL 123


>gi|162449302|ref|YP_001611669.1| inosine 5-monophosphate dehydrogenase [Sorangium cellulosum 'So ce
           56']
 gi|161159884|emb|CAN91189.1| IMP dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 482

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 61/181 (33%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRNFSENDFYVLHPGGKLGTLF 217
           L     P   P G  P  SA M    G  +A  +A          D  +      +  + 
Sbjct: 32  LETDLRPADFPGGSHPIVSANMNAVTGKRMAETMARFGGLGVLPQDMDL----DTVERIV 87

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+   V     L D   I+ ++    V VVD+ ++  GI+T  D+     
Sbjct: 88  HHIKRADPRYDTPLSVSPRATLRDVHGIIRKRSHDMVVVVDDERRPIGIVTHADLR---D 144

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D  T     +M      I   T    A  L+    +  + V+D   +  G++   D +R
Sbjct: 145 RDQYT-PASALMSSRLITIPAGTPNRTAFLLMEDARVKAVPVLDGDGRLHGVLTRDDAVR 203

Query: 338 F 338
            
Sbjct: 204 L 204


>gi|227081462|ref|YP_002810013.1| hypothetical protein VCM66_1246 [Vibrio cholerae M66-2]
 gi|227009350|gb|ACP05562.1| conserved hypothetical protein [Vibrio cholerae M66-2]
          Length = 574

 Score = 76.9 bits (188), Expect = 4e-12,   Method: Composition-based stats.
 Identities = 30/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 35  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 94

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 95  SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 154

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IG
Sbjct: 155 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-RQPIG 213

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 214 IIDMTDIVR 222


>gi|325963518|ref|YP_004241424.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469605|gb|ADX73290.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 138

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 47/108 (43%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVM 289
           +     L  A   + +   G + +  E  +LKG+IT+ DI  + F +  D  T    D  
Sbjct: 15  IGENETLEAAARKMKDLNVGALPICGEDNRLKGMITDRDIVIKCFAEGGDPRTAKAGDFG 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P  I  D  +  A++ + +H +  L V+D     +GI+   D+ R
Sbjct: 75  QGKPVTIGADDSIEEAIRTMEEHQVRRLPVIDGHD-LVGILTQADIAR 121



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 25/53 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  ++M    + I E+  L  A + ++  N+  L +  +  +  G++   D++
Sbjct: 3   TAREIMTGGVECIGENETLEAAARKMKDLNVGALPICGEDNRLKGMITDRDIV 55



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                 +     + +AI  + E +   + V+D G  L GI+T+ DI RN+ +D
Sbjct: 75  QGKPVTIGADDSIEEAIRTMEEHQVRRLPVID-GHDLVGILTQADIARNYPED 126


>gi|257427357|ref|ZP_05603756.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257275550|gb|EEV07023.1| 6-phospho 3-hexuloisomerase [Staphylococcus aureus subsp. aureus
           65-1322]
          Length = 182

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/174 (22%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L    + +F     KI   +  + + G G+SG + +  A  L      +  V 
Sbjct: 11  LDELKMTLSHVEADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLDKQAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I  +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A 
Sbjct: 70  ESTTP-----AIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAG 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             + LP   +   HG A P  S   Q +    D++ + L+   N SE      H
Sbjct: 125 TNIVLPAGTKYDEHGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVSEQTMQQNH 178


>gi|227827429|ref|YP_002829208.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|227830122|ref|YP_002831901.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|229578935|ref|YP_002837333.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           Y.G.57.14]
 gi|229582311|ref|YP_002840710.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|229584644|ref|YP_002843145.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.16.27]
 gi|238619585|ref|YP_002914410.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284997539|ref|YP_003419306.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|227456569|gb|ACP35256.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227459224|gb|ACP37910.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|228009649|gb|ACP45411.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.G.57.14]
 gi|228013027|gb|ACP48788.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|228019693|gb|ACP55100.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.27]
 gi|238380654|gb|ACR41742.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|284445434|gb|ADB86936.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 124

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
            V+    L +   ++ E+  G V VV E    +GI T+ D  +     L++   V     
Sbjct: 15  QVEANTSLQEVCKLMLERGVGSV-VVTEQGVPRGIFTDRDAIKAIAAGLSSSDEVRLAAT 73

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  +I EDT +  A++++  + I  L V +     IG+    D+ +
Sbjct: 74  MGNLIIIDEDTDVFEALKIMAANKIRHLPVKNKNGNIIGMFSITDVHK 121



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 12/126 (9%), Positives = 43/126 (34%), Gaps = 4/126 (3%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-FSENDFYVLHPG 210
           +       ++ P         L      +++  +G  +       R  F++ D       
Sbjct: 1   MLKRIKDFMSTPVFQVEANTSLQEVCKLMLERGVGSVVVTEQGVPRGIFTDRDAI---KA 57

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
              G        +  +  ++ ++     + +A+ I++  +   + V ++   + G+ +  
Sbjct: 58  IAAGLSSSDEVRLAATMGNLIIIDEDTDVFEALKIMAANKIRHLPVKNKNGNIIGMFSIT 117

Query: 271 DIFRNF 276
           D+ + +
Sbjct: 118 DVHKVY 123


>gi|307326857|ref|ZP_07606048.1| CBS domain containing membrane protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887393|gb|EFN18388.1| CBS domain containing membrane protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 200

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D +  V       +   +LS  RF  + VVD+  K+ G+IT  D+           + 
Sbjct: 10  MTDDVVRVSSMTSFDEVGALLSRHRFNGLPVVDDDDKVVGMITGTDLSE------PAPTA 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +M +    +     +  A + + +H +  L VVD+ ++ IGIV   DLLR
Sbjct: 64  GQLMSRPAVTVRPQDSIVDAARAMDRHRVERLPVVDEEERLIGIVTRRDLLR 115



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    ++DA   +   R   + VVDE ++L GI+T  D+ R F +  + +  
Sbjct: 67  MSRPAVTVRPQDSIVDAARAMDRHRVERLPVVDEEERLIGIVTRRDLLRVFLRPDDEIRA 126

Query: 286 EDV 288
           E +
Sbjct: 127 EVI 129


>gi|295703027|ref|YP_003596102.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294800686|gb|ADF37752.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium DSM
           319]
          Length = 185

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 18/187 (9%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L++++ E    ++L +        +    V  I + K +V +TG G+SG +G   A  + 
Sbjct: 7   LKTVMNELLQTTALIA------DDEAEQLVNGIISSK-KVFVTGAGRSGLMGKSFAMRMM 59

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  ++ +     S       T+DDL+I+ S SG +  L  I   A+     +  +T  
Sbjct: 60  HMGIDAYVIGETVTS-----TFTQDDLLIIGSGSGETKSLIPIAQKAKELGGKVGVVTIS 114

Query: 148 NKSVVACHADIVLTLP----KEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSE 201
           + S +   AD ++ LP     + +S    + P  S   Q      DAL +  +E +    
Sbjct: 115 SDSTLGKLADFIVKLPGAPKDQEQSSYQTVQPMASLFEQTLLLFYDALILRFMEKKELDT 174

Query: 202 NDFYVLH 208
           +  Y  H
Sbjct: 175 HTMYGKH 181


>gi|239630929|ref|ZP_04673960.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|301065250|ref|YP_003787273.1| transcriptional regulator [Lactobacillus casei str. Zhang]
 gi|239527212|gb|EEQ66213.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|300437657|gb|ADK17423.1| Transcriptional regulator [Lactobacillus casei str. Zhang]
          Length = 289

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/184 (17%), Positives = 64/184 (34%), Gaps = 5/184 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
               + KN+T+    + ++ +     SL  ++           +  I     R+++ G+G
Sbjct: 82  DDQEIQKNATLTTIKQKLLIDAN--QSLRETVDQLNEANVDTIINLIHQSD-RLLVFGVG 138

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD-DLIIVLSWSGSSDELKAILY 132
            S      +A      G P                   +  L   +S SG S E+     
Sbjct: 139 ASYLAAQNIAQKWGRLGYPCHVSDDLNLFLPLAATADANRTLCWFISNSGESPEVVLAAK 198

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            A++  + +I  T   K+ +  +AD+ +    +P    +  A T S   Q  + D L  A
Sbjct: 199 LAKKAGLQVIVTTKLGKNSLTKYADVSIQTS-QPMEARNRFAATQSLHTQFMLIDILYYA 257

Query: 193 LLES 196
            +  
Sbjct: 258 YVSR 261


>gi|167578020|ref|ZP_02370894.1| HPP family protein [Burkholderia thailandensis TXDOH]
          Length = 392

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 35/66 (53%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  D+M ++P  I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 236 LRAYARTFDELSCADIMSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTR 295

Query: 333 LDLLRF 338
            DL + 
Sbjct: 296 ADLSKA 301



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 18/132 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHK 278
                  +    PL  A+T+L   R   + VVD   ++ GI+T  D+ +        F +
Sbjct: 252 MSRHPISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTRADLSKAAPYATPGFLR 311

Query: 279 DLN----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            L+                VM      +   T +   + L   H    + VVD   +  G
Sbjct: 312 GLSARLPRSLVGPAFVARAVMSTRVHTVRPATPIAELVPLFADHGHHHIPVVDAEHRLAG 371

Query: 329 IVHFLDLLRFGI 340
           IV   DL+  G+
Sbjct: 372 IVTQADLI-AGL 382


>gi|254557976|ref|YP_003064393.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|254046903|gb|ACT63696.1| transcription regulator [Lactobacillus plantarum JDM1]
          Length = 282

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 57/152 (37%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++         L      A  ++ A K  V + G+G S  + +         G       
Sbjct: 103 ITHTIDETNRSLDDAALQAASQLIADKASVYVYGLGASNVVATDFEQKFIRIGKAVIHSQ 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +    ++ +++++S SG   E   +   A   ++P+I ++    S +   AD
Sbjct: 163 DPHLLAVGMTTQRQNVVLLLISNSGEKSESIRLANLAHSINVPVIVLSRNATSTLGKLAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+L      E+     A TTS + QL + D L
Sbjct: 223 IILINDDSEENQTARAAATTSLMAQLYVVDLL 254


>gi|226313748|ref|YP_002773642.1| acetoin utilization protein AcuB [Brevibacillus brevis NBRC 100599]
 gi|226096696|dbj|BAH45138.1| acetoin utilization protein AcuB [Brevibacillus brevis NBRC 100599]
          Length = 214

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 47/119 (39%), Gaps = 11/119 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
               +  ++    + +A+ +L   R   + V+ E   L GI+++ D+      R    D 
Sbjct: 7   MRKKMVTIQPSTTIGEALLLLRANRIRHLPVI-ENDSLVGIVSDRDLRDALPSRLLTHDD 65

Query: 281 NTL----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +       V D+M +          +  A   L +H I  L +V +  + +G++   DL
Sbjct: 66  DDTVLHKPVADIMNQQVITAHPLDFIEDAALQLYEHKIGSLPIV-EGNRLVGLITESDL 123



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +E++M K    I   T +  A+ LLR + I  L V+++    +GIV   DL
Sbjct: 1   MRIEEIMRKKMVTIQPSTTIGEALLLLRANRIRHLPVIEND-SLVGIVSDRDL 52


>gi|315230214|ref|YP_004070650.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
 gi|315183242|gb|ADT83427.1| hypothetical protein TERMP_00450 [Thermococcus barophilus MP]
          Length = 135

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTLSVEDVMI 290
           V     + +A  I+ +   G + V+ E  ++ G  T+ DI  R     L  T  V+++M 
Sbjct: 18  VNPDDTIQEACRIMVKFDIGSLVVI-ENDRVVGFFTKSDIIRRVIVPGLPYTTPVKEIMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +       +T +   ++ +  H I  +++ ++  K +GI    DLL  
Sbjct: 77  RELITTDANTPVREVLKTMAYHRIKHILI-EEEGKIVGIFTLSDLLEA 123



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 10/61 (16%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               ++  M +    +  D  +  A +++ + +I  L+V+++  + +G     D++R  I
Sbjct: 3   RNAPIKVYMTRKLIGVNPDDTIQEACRIMVKFDIGSLVVIEND-RVVGFFTKSDIIRRVI 61

Query: 341 I 341
           +
Sbjct: 62  V 62



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 1/48 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
              P+ + +  ++  R   + + +E  K+ GI T  D+     + L T
Sbjct: 84  ANTPVREVLKTMAYHRIKHILI-EEEGKIVGIFTLSDLLEATRRKLET 130


>gi|312870031|ref|ZP_07730168.1| SIS domain protein [Lactobacillus oris PB013-T2-3]
 gi|311094428|gb|EFQ52735.1| SIS domain protein [Lactobacillus oris PB013-T2-3]
          Length = 277

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 11/187 (5%)

Query: 17  SLMKNSTVQCALR----SIIAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAIKGRVVI 69
           S +  S +  A R    SI+ E   ++  + SL+     +S      + +I     RV I
Sbjct: 70  SYLTTSNLIQAKRMSEGSILDE--VITYYKQSLEETKSLISLSQLKKITRIIRKANRVYI 127

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG+   +L   L   G  S  V  +        +I+  D I+  S SG++ E+  
Sbjct: 128 LGVGSSGYNALELNQRLMRMGINSCAVCDSSMMSIIDTIISPKDTILAFSVSGNTLEICD 187

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +   R   + + +IT+ + SV+A  ++ +L +    +S  +      S      I D L
Sbjct: 188 AVQKCREKGVVITSITAFSNSVLAKRSNNILLIKNTEKSPNYN--FMNSQFTINYIIDLL 245

Query: 190 AIALLES 196
              LLE 
Sbjct: 246 TEILLEH 252


>gi|257867113|ref|ZP_05646766.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257873448|ref|ZP_05653101.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC10]
 gi|257877192|ref|ZP_05656845.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC20]
 gi|257801169|gb|EEV30099.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257807612|gb|EEV36434.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC10]
 gi|257811358|gb|EEV40178.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           casseliflavus EC20]
          Length = 286

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 56/144 (38%), Gaps = 1/144 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  Q   A  ++ A + R+ + GIG S  I   +       G    F +        L  
Sbjct: 117 LEEQLMLAAAELIATRERIFVCGIGASSLIAQDIQQKWTRLGKIVVFENDYNLLLPQLVK 176

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
             +  L+ V+S SG + E+  +   A+   +P++++T    + +   AD+ L +    + 
Sbjct: 177 NEKKSLVWVISNSGHTPEMVHLAEIAKNLGVPILSLTRFGSNPLTKLADVPLQVS-RSKE 235

Query: 169 CPHGLAPTTSAIMQLAIGDALAIA 192
                A T S I  L   D L   
Sbjct: 236 ANQRSAATNSIIAHLLAVDVLFYV 259


>gi|240102360|ref|YP_002958668.1| hypothetical protein TGAM_0302 [Thermococcus gammatolerans EJ3]
 gi|239909913|gb|ACS32804.1| Conserved hypothetical protein [Thermococcus gammatolerans EJ3]
          Length = 186

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 49/140 (35%), Gaps = 17/140 (12%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    +        +     L   +  L         VVD+  KL G IT  D+ R
Sbjct: 42  RYISKVPVKLVMDREFLTLHPEESLSKLVQSL-RGEESSAVVVDDEGKLLGFITMKDLLR 100

Query: 275 NFHKDL----------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            F                    N   VED+M++ P  I  D  L  A++++ +     L 
Sbjct: 101 FFEPPRRYSIVGINLLKKYSISNASRVEDIMVRKPITIHVDENLGRAIRIMLETGKHHLP 160

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVDD  +  GI+   D++R 
Sbjct: 161 VVDDKNRVHGILEVKDIIRL 180


>gi|257388104|ref|YP_003177877.1| signal transduction protein with CBS domains [Halomicrobium
           mukohataei DSM 12286]
 gi|257170411|gb|ACV48170.1| putative signal transduction protein with CBS domains
           [Halomicrobium mukohataei DSM 12286]
          Length = 134

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTL 283
                  V     + DA  ++ ++  G + V D+   ++GI+T  D      +       
Sbjct: 10  MTSDPVTVSPDTLVEDAAQLMIDESIGSLIVTDDDNDIRGILTSTDFVEIVKESDPKAQT 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +VE  M  +         +     L+ +  I  + VVD+ +  IGI+   DL 
Sbjct: 70  TVERYMSTDVLTTTAQEQIQAVADLMLEAGIHHVPVVDETEGVIGIISTTDLT 122



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ + V  +M  +P  +  DTL+  A QL+   +I  L+V DD     GI+   D +  
Sbjct: 1   MDDIFVGRLMTSDPVTVSPDTLVEDAAQLMIDESIGSLIVTDDDNDIRGILTSTDFVEI 59


>gi|170690312|ref|ZP_02881479.1| putative signal transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
 gi|170144747|gb|EDT12908.1| putative signal transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
          Length = 251

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 46/115 (40%), Gaps = 4/115 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--D 279
           V         V+    L  A  +L  +  GC+ V  +   L G+IT+ DI  R      D
Sbjct: 3   VRERMKEAVCVRPDQTLAAAARLLKRENIGCLPVCQDDTVL-GMITDRDIAMRGVADGFD 61

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            N + V DVM  +     ED  +  A+  +   ++  L V D     +G++   D
Sbjct: 62  SNVMKVSDVMSLDVIHCSEDDSVESAVLTMHAAHVQRLAVTDGDGHLVGVISMSD 116


>gi|55379374|ref|YP_137223.1| hypothetical protein rrnAC2755 [Haloarcula marismortui ATCC 43049]
 gi|55232099|gb|AAV47518.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 418

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 1/120 (0%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +DVM   D +  V     + + I  +  +R     V     ++ G++T  D       
Sbjct: 271 TVADVMTPADHVTTVADDMSVRELIQTMFRERHTGYPVK-RSGEVVGLVTLEDARAVQEV 329

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +V DVM      I  +T +  A+  L+Q+++  L+V D+     G++   D++  
Sbjct: 330 EREAYTVGDVMTTEIITISPETDVMDALTSLQQNSVGRLLVTDEDGSFEGLLTRSDIMTA 389



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 27/69 (39%), Gaps = 2/69 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
               ++        DVM +      +     ++DA+T L +   G + V DE    +G++
Sbjct: 324 RAVQEVEREAYTVGDVMTTEIIT--ISPETDVMDALTSLQQNSVGRLLVTDEDGSFEGLL 381

Query: 268 TEGDIFRNF 276
           T  DI    
Sbjct: 382 TRSDIMTAL 390


>gi|238790177|ref|ZP_04633953.1| Transcriptional regulator [Yersinia frederiksenii ATCC 33641]
 gi|238721715|gb|EEQ13379.1| Transcriptional regulator [Yersinia frederiksenii ATCC 33641]
          Length = 295

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 69/180 (38%), Gaps = 5/180 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           +   + ++  +   L  +      +  L+ +     S     A   I   + RV+I G+G
Sbjct: 95  REEEITEHDNLDTVLDKVF--SNSIQVLKEARSVADSATIGEAARFIFKAR-RVIIFGVG 151

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  +       L   G                  +  +D++I +S +G + E+   +  
Sbjct: 152 GSASVSMDFEHKLLRIGIICHTYSDFHLMLMVASQLDENDVVIAISQTGDTREILEAVNT 211

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           AR     +I IT+++ S ++  +D+ +  P          A   + I+QL + D+L I +
Sbjct: 212 ARSRKAKIICITNDDGSPLSQCSDLSIFSPAMSGPLLGQNA--VARIVQLNLLDSLFIGI 269


>gi|116670356|ref|YP_831289.1| RpiR family transcriptional regulator [Arthrobacter sp. FB24]
 gi|116610465|gb|ABK03189.1| transcriptional regulator, RpiR family [Arthrobacter sp. FB24]
          Length = 309

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 57/164 (34%), Gaps = 1/164 (0%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+  + SL  + Q +       AV+ I      V+ + +G S     +        G   
Sbjct: 116 ERSSVQSLRRTGQRQDVEAIQRAVDLI-DASNTVIFSCMGSSSIAAEEAVMRFTRAGKKC 174

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                         +I   DL+I +S SG S  +   ++ AR+     IAIT    S + 
Sbjct: 175 MLYRDTTIQVMLAAIIEPGDLLIGISDSGRSTPIIDAMHLARQRGAATIAITGAEGSPLR 234

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +AD+VL     P          TS   QL + D L        
Sbjct: 235 NYADVVLYTATVPSGGELYGESVTSKWGQLLVIDILYATYASRH 278


>gi|90407242|ref|ZP_01215429.1| putative rpiR-family transcriptional regulatory protein
           [Psychromonas sp. CNPT3]
 gi|90311665|gb|EAS39763.1| putative rpiR-family transcriptional regulatory protein
           [Psychromonas sp. CNPT3]
          Length = 291

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 1   MHFYFSHFKSVTRK--GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE 58
           +   FSH     +     ++  +  VQ   + +   KR ++++ S     L F     + 
Sbjct: 80  LAIEFSHINQQDKSIFDGNVTADDDVQMISQKL---KRSINNVLSETINLLDFNVIEEIT 136

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
                   +   G+G SG +           G     +      +    ++ + D++I +
Sbjct: 137 AHIVKAEAIYFFGVGSSGLVAESAKHKFMRIGLRVDALTNNHFMYMQASLLKKGDIVIGI 196

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E    L  A+     +IAIT   +S +   AD VL                 +
Sbjct: 197 SHSGYSSETIKALTLAKEAGAVIIAITHNPRSTLGELADHVLVNGNRQGKLQGDSI--GT 254

Query: 179 AIMQLAIGDALAIALLES 196
            I Q+ + D L  A ++ 
Sbjct: 255 KISQMFVLDLLYTAFIKE 272


>gi|18309171|ref|NP_561105.1| RpiR family transcriptional regulator [Clostridium perfringens str.
           13]
 gi|110800351|ref|YP_694646.1| RpiR family transcriptional regulator [Clostridium perfringens ATCC
           13124]
 gi|168205649|ref|ZP_02631654.1| transcriptional regulator, RpiR family [Clostridium perfringens E
           str. JGS1987]
 gi|168210229|ref|ZP_02635854.1| transcriptional regulator, RpiR family [Clostridium perfringens B
           str. ATCC 3626]
 gi|168213294|ref|ZP_02638919.1| transcriptional regulator, RpiR family [Clostridium perfringens CPE
           str. F4969]
 gi|168217291|ref|ZP_02642916.1| transcriptional regulator, RpiR family [Clostridium perfringens
           NCTC 8239]
 gi|182624808|ref|ZP_02952588.1| transcriptional regulator, RpiR family [Clostridium perfringens D
           str. JGS1721]
 gi|141086|sp|P26833|Y189_CLOPE RecName: Full=Uncharacterized HTH-type transcriptional regulator
           CPE0189
 gi|144859|gb|AAA23257.1| unknown [Clostridium perfringens]
 gi|18143846|dbj|BAB79895.1| conserved hypothetical protein [Clostridium perfringens str. 13]
 gi|110674998|gb|ABG83985.1| transcriptional regulator, RpiR family [Clostridium perfringens
           ATCC 13124]
 gi|170662761|gb|EDT15444.1| transcriptional regulator, RpiR family [Clostridium perfringens E
           str. JGS1987]
 gi|170711722|gb|EDT23904.1| transcriptional regulator, RpiR family [Clostridium perfringens B
           str. ATCC 3626]
 gi|170715161|gb|EDT27343.1| transcriptional regulator, RpiR family [Clostridium perfringens CPE
           str. F4969]
 gi|177910018|gb|EDT72420.1| transcriptional regulator, RpiR family [Clostridium perfringens D
           str. JGS1721]
 gi|182380668|gb|EDT78147.1| transcriptional regulator, RpiR family [Clostridium perfringens
           NCTC 8239]
          Length = 279

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 64/169 (37%), Gaps = 6/169 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            S  + A + + +    L      +  +L        + I   K RV   GIG SG   +
Sbjct: 91  ESVTETANKMLKSSINILEQTVKQIDLDL---MCKCRDLIMNAK-RVYFIGIGYSGIAAT 146

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G  +  V  +        +   DD+I+ +S SG++ E+   +  A+     
Sbjct: 147 DINYKFMRIGFTTVPVTDSHTMVIMSSITNDDDVIVAISNSGTTKEVIKTVKQAKENGTK 206

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +I +T ++ + +   +D  LT          G    +S I Q+ + D L
Sbjct: 207 IITLTEDSDNPLRKLSDYELTYTSAETIFETGSI--SSKIPQIFLLDLL 253


>gi|141336|sp|P15889|YR33_THEPE RecName: Full=Uncharacterized 33.4 kDa protein in ribosomal RNA
           operon
 gi|48226|emb|CAA32944.1| unnamed protein product [Thermofilum pendens]
          Length = 300

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P V     L + I ++ E+  G +AVVDE  ++ GI++E  +          + V+
Sbjct: 90  KYDPPYVYTRSDLREVIELMVERGIGALAVVDEDLRVVGIVSERHVISLLANVETHVKVK 149

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++M      +     L   M+++ +  I  L +V   +   GIV   D+L
Sbjct: 150 EIMTSEVVYLSPMDSLFEGMRVMSERRIRRLPLVSGEE-LRGIVTIKDVL 198



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 16/121 (13%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + +V     ++D +  +   R   V +VDE   LKG+++  D+            VE
Sbjct: 11  FPPLAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLVDFLGGRRFRDVVE 70

Query: 287 -----DVMIK-----------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                DV              +P  +   + L   ++L+ +  I  L VVD+  + +GIV
Sbjct: 71  ARFNGDVYKALEQTGVEFLKYDPPYVYTRSDLREVIELMVERGIGALAVVDEDLRVVGIV 130

Query: 331 H 331
            
Sbjct: 131 S 131



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L  +             +  +     L + + ++SE+R   + +V  G++L+GI+T  D+
Sbjct: 139 LANVETHVKVKEIMTSEVVYLSPMDSLFEGMRVMSERRIRRLPLV-SGEELRGIVTIKDV 197

Query: 273 FRNFHKDLNTLSVED-------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                ++     +++             +  K    + +D  + +A+ L+++H I  L V
Sbjct: 198 LSYVSREDVLARLKEGSRSAVYDTPLVYISSKPVLAVEDDVDVGLAVSLMKKHGIGAL-V 256

Query: 320 VDDCQKAIGIVHFLDLL 336
           V    K  GIV   D+L
Sbjct: 257 VTHDGKPRGIVTERDVL 273


>gi|261868243|ref|YP_003256165.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D11S-1]
 gi|261413575|gb|ACX82946.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D11S-1]
          Length = 289

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 35  KRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           +  +S +       L FQ     V+ I+  K RV + G+G SG       +     G P 
Sbjct: 108 QAAISKVMDETVNLLDFQQLERVVQAIQKAK-RVFLFGVGSSGVTAEDAKNKFMRIGVPV 166

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                    +    ++   D+ I +S SG S E    L  A++     +A+T   +S + 
Sbjct: 167 DATGNNHFMYMQAALLKETDVAIGISHSGYSQETAHTLKIAKQNGATTVALTHSLRSPIT 226

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            HAD VL    +            + I QL + D +   L+++
Sbjct: 227 EHADFVLVNGNKQGKLQGDSI--GTKIAQLFVLDLIYALLVQA 267


>gi|126459949|ref|YP_001056227.1| signal-transduction protein [Pyrobaculum calidifontis JCM 11548]
 gi|126249670|gb|ABO08761.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           calidifontis JCM 11548]
          Length = 160

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNF 276
           C   V  +  ++       PL + + ++ E+  G V VVD     +  GI+ E D+ R  
Sbjct: 16  CVKVVAVARTNVVTCTPNTPLREVVELMVERGVGSVVVVDPANPRRPVGIVGERDVLRAL 75

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              ++ +  V  VM K    +  +  +  A+  +R+HN+  ++V+    +  G+V   D+
Sbjct: 76  ALGVDLSTPVSQVMSKLLVAVDAEAHVGEAVLAMREHNVRRVVVL-KGGELYGVVALRDI 134

Query: 336 L 336
           +
Sbjct: 135 V 135



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
            V  V   N      +T L   ++L+ +  +  ++VVD     + +GIV   D+LR 
Sbjct: 18  KVVAVARTNVVTCTPNTPLREVVELMVERGVGSVVVVDPANPRRPVGIVGERDVLRA 74


>gi|193212626|ref|YP_001998579.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chlorobaculum parvum NCIB 8327]
 gi|193086103|gb|ACF11379.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chlorobaculum parvum NCIB 8327]
          Length = 655

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 62/189 (32%), Gaps = 21/189 (11%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAI-------GDALAIALLESRNFSENDFYVLHPGGKLG 214
           +P E         P+ +A    AI         +L+ A    R         + P     
Sbjct: 117 IPVETIRELSQSEPSVAAFFTGAIAKSVQNIEHSLSEAFDLRRG-------SMEPSELTL 169

Query: 215 TLF-VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                    V+     +        + +A  I+S+   G + VV E +   GIIT+ D+ 
Sbjct: 170 RCLLDNEPLVVDQVRDVITCSPDISIREAAKIMSDNNIGSIIVVSEERHPLGIITDTDLR 229

Query: 274 R---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAI- 327
           +        ++   V ++M      I     +     L+ +  +    + +D      I 
Sbjct: 230 KKVVAVPGQVSDRPVSEIMSSPVYTITAGKTVADMTMLMVRTKLRHFCITEDGTLNSPIT 289

Query: 328 GIVHFLDLL 336
           GI+   D++
Sbjct: 290 GIISEHDIV 298



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/81 (20%), Positives = 35/81 (43%), Gaps = 13/81 (16%)

Query: 271 DIFRNFHK----------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           D+ R   +          D   L V+ V  ++      D  +  A +++  +NI  ++VV
Sbjct: 156 DLRRGSMEPSELTLRCLLDNEPLVVDQV--RDVITCSPDISIREAAKIMSDNNIGSIIVV 213

Query: 321 DDCQKAIGIVHFLDLLRFGII 341
            + +  +GI+   DL R  ++
Sbjct: 214 SEERHPLGIITDTDL-RKKVV 233


>gi|300691195|ref|YP_003752190.1| hypothetical protein RPSI07_1542 [Ralstonia solanacearum PSI07]
 gi|299078255|emb|CBJ50903.1| conserved hypothethical protein [Ralstonia solanacearum PSI07]
          Length = 156

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIF---RNFHKD 279
               I  V+    L     ++ ++    + V + G    ++ GI+T+ D+       H D
Sbjct: 7   CSRRIVHVEATTTLQHVARLMRDQHQRALFVTEHGVTGTRVVGIVTDRDMVVHGLAGHTD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             T  V +VM +    I  D +++ A++++  H +  L V+D  +  IG++   D +R 
Sbjct: 67  CGTAPVSEVMTRGVLTIDADAVISDALRIMLGHGLHRLAVIDGQKMLIGMLTLDDTIRA 125


>gi|146319587|ref|YP_001199299.1| transcriptional regulator [Streptococcus suis 05ZYH33]
 gi|146321787|ref|YP_001201498.1| transcriptional regulator [Streptococcus suis 98HAH33]
 gi|253752588|ref|YP_003025729.1| RpiR family regulatory protein [Streptococcus suis SC84]
 gi|253754414|ref|YP_003027555.1| RpiR family transcriptional regulator [Streptococcus suis P1/7]
 gi|253756348|ref|YP_003029488.1| RpiR family regulatory protein [Streptococcus suis BM407]
 gi|145690393|gb|ABP90899.1| Transcriptional regulator [Streptococcus suis 05ZYH33]
 gi|145692593|gb|ABP93098.1| Transcriptional regulator [Streptococcus suis 98HAH33]
 gi|251816877|emb|CAZ52525.1| RpiR family regulatory protein [Streptococcus suis SC84]
 gi|251818812|emb|CAZ56653.1| RpiR family regulatory protein [Streptococcus suis BM407]
 gi|251820660|emb|CAR47421.1| RpiR family regulatory protein [Streptococcus suis P1/7]
 gi|292559202|gb|ADE32203.1| transcriptional regulator [Streptococcus suis GZ1]
 gi|319759002|gb|ADV70944.1| transcriptional regulator [Streptococcus suis JS14]
          Length = 275

 Score = 76.9 bits (188), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 3/145 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   AV+ +++   R+ + G+G SG + S     L+  G    F         ++    
Sbjct: 113 EELEAAVKLLQSAS-RIYLFGVGASGIVCSDFYYKLSRIGKTCIFAQDTHIQMANIATAG 171

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL I +S+SG + E+   L +A+   +  I IT   K+ +A  ADI   +P+      
Sbjct: 172 NGDLAIGISYSGMTKEVVEPLRFAKENGVSTITITGTGKNQLADLADITFRIPRHEHELR 231

Query: 171 HGLAPTTSAIMQLAIGDALAIALLE 195
            G    TS    L + D L +AL++
Sbjct: 232 VGAI--TSRSNSLFLTDLLYLALIQ 254


>gi|254387219|ref|ZP_05002484.1| CBS domain containing protein [Streptomyces sp. Mg1]
 gi|194346029|gb|EDX26995.1| CBS domain containing protein [Streptomyces sp. Mg1]
          Length = 139

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     L  A  +++    G + + D  ++L GI+T+ DI         D   
Sbjct: 8   MHPGAQWIPATETLDRAAQLMARLGVGALPISDAAERLCGILTDRDIVVNCVAMGHDPAK 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  D+    P+ I     +T  ++ ++ H I  L V+   ++ +G++   DL +
Sbjct: 68  VTCGDMAHGTPRWIDAGADVTDVLEEMQSHQIRRLPVI-RDKRLVGMISEADLAQ 121



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M    + I     L  A QL+ +  +  L + D  ++  GI+   D++
Sbjct: 2   TTAADIMHPGAQWIPATETLDRAAQLMARLGVGALPISDAAERLCGILTDRDIV 55



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            +  +   +  G  + D +  +   +   + V+   ++L G+I+E D+ ++   D     
Sbjct: 73  MAHGTPRWIDAGADVTDVLEEMQSHQIRRLPVI-RDKRLVGMISEADLAQHLSDDQMATF 131

Query: 285 VEDV 288
           VE V
Sbjct: 132 VEKV 135


>gi|148990520|ref|ZP_01821658.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|221232007|ref|YP_002511159.1| phosphosugar-binding transcriptional regulator [Streptococcus
           pneumoniae ATCC 700669]
 gi|147924236|gb|EDK75333.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Streptococcus pneumoniae SP6-BS73]
 gi|220674467|emb|CAR69027.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus pneumoniae ATCC 700669]
 gi|301794383|emb|CBW36814.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus pneumoniae INV104]
 gi|332203167|gb|EGJ17235.1| SIS domain protein [Streptococcus pneumoniae GA47901]
          Length = 203

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/143 (26%), Positives = 67/143 (46%), Gaps = 3/143 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   A++ I+    ++++ G+G SG+   +  S+L   G  S  V           ++  
Sbjct: 41  QIELAIKLIREA-NQILMIGVGSSGNAAREFESSLLRIGIISKTVIDTHFQLMHTALLKD 99

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DLII  S SGS+ E++  L  A+R ++ +I+IT+ +   +A  +D VL   K+      
Sbjct: 100 NDLIIAFSLSGSTKEVEETLLNAKRKNVKIISITNYSSRNIAKLSDCVLLTSKKESYLEG 159

Query: 172 GLAPTTSAIMQLAIGDALAIALL 194
           G     +   QL I D +   L 
Sbjct: 160 GSL--MAKASQLFIIDVICTRLS 180


>gi|258591750|emb|CBE68051.1| CBS domain containing membrane protein [NC10 bacterium 'Dutch
           sediment']
          Length = 214

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 16/129 (12%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               S+  V     L  A+T L       + VV +G  + GI+++ D+ +          
Sbjct: 6   RMRRSLVSVAQSDTLDHALTTLKRFNIRHLPVV-KGDHVVGIVSDRDVKKAAPSPFDYPT 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              F    + +S++D+M K    +   T +  A  L+ Q  I  L VV    + IG++  
Sbjct: 65  AEEFRAFTSAVSIKDIMTKEVITVAPLTPIEEAASLMSQKRIGALPVV-QEGRLIGMLTE 123

Query: 333 LDLLRFGII 341
            D+L  G+I
Sbjct: 124 TDVL--GVI 130



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+D M ++   + +   L  A+  L++ NI  L VV      +GIV   D+ + 
Sbjct: 1   MRVKDRMRRSLVSVAQSDTLDHALTTLKRFNIRHLPVV-KGDHVVGIVSDRDVKKA 55


>gi|293390295|ref|ZP_06634629.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D7S-1]
 gi|290950829|gb|EFE00948.1| N-acetylmannosamine kinase [Aggregatibacter actinomycetemcomitans
           D7S-1]
          Length = 289

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 35  KRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           +  +S +       L FQ     V+ I+  K RV + G+G SG       +     G P 
Sbjct: 108 QAAISKVMDETVNLLDFQQLERVVQAIQKAK-RVFLFGVGSSGVTAEDAKNKFMRIGVPV 166

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                    +    ++   D+ I +S SG S E    L  A++     +A+T   +S + 
Sbjct: 167 DATGNNHFMYMQAALLKETDVAIGISHSGYSQETAHTLKIAKQNGATTVALTHSLRSPIT 226

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            HAD VL    +            + I QL + D +   L+++
Sbjct: 227 EHADFVLVNGNKQGKLQGDSI--GTKIAQLFVLDLIYALLVQA 267


>gi|156129382|gb|ABU50910.1| putative CBS domain protein [Pseudomonas sp. WBC-3]
          Length = 146

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 54/117 (46%), Gaps = 5/117 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     ++DA+ ++++K  G +AVV E  ++ GI++E D  R      +   
Sbjct: 13  MQNQKVHSINPCEMVLDALKLMADKNIGALAVV-ENGQVVGIVSERDYARKVVLKGRSSV 71

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V D+M      +  +  +   M ++ + ++  L VV +  + IG++   DL++ 
Sbjct: 72  GTPVRDIMNSPVITVSANLCVEHCMTIMTESHLRHLPVV-EDGELIGLLSIGDLVKE 127


>gi|120603627|ref|YP_968027.1| nucleotidyl transferase [Desulfovibrio vulgaris DP4]
 gi|120563856|gb|ABM29600.1| Nucleotidyl transferase [Desulfovibrio vulgaris DP4]
          Length = 367

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 1/99 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           ++     L   +  L+      + V+D+  +L+G +T+GD+ R   + +     +   M 
Sbjct: 11  IISHNATLAQGLNKLNSNAGATLFVIDDDNRLRGTMTDGDVRRALLQGVRLEDPINQAMH 70

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
             P V    + L   ++L+  H +  L V+DD    +GI
Sbjct: 71  SAPFVTHVSSALEERLRLMHAHGVRHLPVIDDSGFLLGI 109


>gi|15899412|ref|NP_344017.1| hypothetical protein SSO2691 [Sulfolobus solfataricus P2]
 gi|284173216|ref|ZP_06387185.1| hypothetical protein Ssol98_00965 [Sulfolobus solfataricus 98/2]
 gi|13816010|gb|AAK42807.1| Conserved hypothetical protein [Sulfolobus solfataricus P2]
 gi|261601182|gb|ACX90785.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 133

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 55/120 (45%), Gaps = 3/120 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKD 279
             + +      +     L +A+  + ++      +VD+  G+++ GI+T   I  +  K 
Sbjct: 4   KDVFNNTRPIRIARHTSLSEALERMDKQGVKFALIVDDSKGEEIIGIVTRSIILSSLGKG 63

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    V  VMIKN   I  +  L      + ++NI+ L+ +++  K IG+V   D+L  
Sbjct: 64  ISQNEPVSKVMIKNVITINGEEDLIDTFMFMMKNNITHLLAINENGKIIGVVTLRDVLSA 123


>gi|332796598|ref|YP_004458098.1| signal-transduction protein [Acidianus hospitalis W1]
 gi|332694333|gb|AEE93800.1| signal-transduction protein [Acidianus hospitalis W1]
          Length = 239

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 5/127 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G +      +M S   +  +     L +A  I++ K  G + VV  G  ++GIITE D
Sbjct: 51  NWGKIDDTVDKIMTSD--LQFIDKNSDLKEACRIVTAKGIGSL-VVGNGDNIEGIITERD 107

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R    D+N+  V+D+M KNP +I  DT L   ++ ++Q  +   +V        G++ 
Sbjct: 108 LIRYCKADINSF-VQDIMNKNPLIISADTTLAEVVEFMKQKYVRHAIVA-CDNLPCGVIS 165

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 166 TKDIGKA 172



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 37/103 (35%), Gaps = 3/103 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
              +  ++     L + +  + +K      +V       G+I+  DI +     KDL   
Sbjct: 124 MNKNPLIISADTTLAEVVEFMKQKYVRHA-IVACDNLPCGVISTKDIGKALLAKKDLTKT 182

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            V   M  N   +  D  +  A  L+ + NI  L V +  +  
Sbjct: 183 EVSGFMSNNVFKVYPDDKIETARMLMAEKNIGFLPVTNSKEIL 225



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 5/52 (9%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM  +   + +DT +  A+ ++ ++NI  L+V  +     GIV   D++
Sbjct: 3   VKDVMSPDVIKVTKDTKIYDALNIMIRNNIRRLVVESN-----GIVTIRDIV 49


>gi|319793526|ref|YP_004155166.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus EPS]
 gi|315595989|gb|ADU37055.1| inosine-5'-monophosphate dehydrogenase [Variovorax paradoxus EPS]
          Length = 489

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 64/169 (37%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNLTAQQQAAEVARVKRYESGVLR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     +   + +  +       VVD   K+ GI+T  D+     ++   + V ++M 
Sbjct: 97  VVITPTHSVRQVMALSDQLGISGFPVVDA-GKVVGIVTGRDLRF---ENRYDVPVSEIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +      + + T L  A  LL ++ +  L+V++   +  G++   D+ +
Sbjct: 153 QRDKLITVPDGTTLAEAKALLNKYKLERLLVINGDWELKGLITVKDITK 201


>gi|91202354|emb|CAJ75414.1| conserved hypothetical sugar phosphate isomerase protein
           [Candidatus Kuenenia stuttgartiensis]
          Length = 200

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ + S L       F      I   K  + +TG G+SG +    A  L   G  ++ V 
Sbjct: 26  LNEIHSVLDKINEQSFAQLFSSILDAKN-IFVTGQGRSGLVSRTFAMRLTHIGLNAYCVG 84

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A   +     I + DL+I  S SG++     I   A++    + AITS+  S +  +AD
Sbjct: 85  DATTPN-----IDKGDLLIACSSSGNTHITCYIAELAKKSFATVAAITSQKNSPLTEYAD 139

Query: 158 IVLTLPKEP----ESCPHGLAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
           I++ LP +           +   ++   Q  L   D +   L+     SE +    H
Sbjct: 140 IIVDLPVQEIRTHNKINGSIQFRSTLFEQACLVYLDGVIHLLVTELRSSEQEMNRRH 196


>gi|304394972|ref|ZP_07376856.1| sugar isomerase (SIS) [Pantoea sp. aB]
 gi|304357225|gb|EFM21588.1| sugar isomerase (SIS) [Pantoea sp. aB]
          Length = 186

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE + Q   + Q    +++I++    + + G G+SG      A+ L   G     V 
Sbjct: 11  LRELERNAQDIDNGQALQLIDRIRSA-NHIFLQGAGRSGIAIRAFANRLMHLGLSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A H         DL+I+ S SG +  L+++   A    + +  +T + +S +   A 
Sbjct: 70  EISAPHS-----RPGDLLIIGSGSGETVSLRSLAQTATERGVEVALVTLKKESTIGQLAG 124

Query: 158 IVLTLPKEPESCPHGLA-----PTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            VL LP   ++     A     P  SA  Q      DA+ + L++    +    +  H
Sbjct: 125 CVLVLPGTVKTGHANQAGQFSQPMGSAFEQLCFITYDAIVLELMKQMGETSETMFERH 182


>gi|281203776|gb|EFA77972.1| hypothetical protein PPL_08617 [Polysphondylium pallidum PN500]
          Length = 198

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 32/120 (26%), Positives = 52/120 (43%), Gaps = 18/120 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------RNFHKDL 280
            K G  L     ++ +  +  + VVDE   L GI+T+ DI               + + L
Sbjct: 55  CKPGDTLEHVFKVMVKYGYKRLPVVDENYTLLGIVTDRDIRVYSKSPFETKSEEEWFEFL 114

Query: 281 NTLSVEDVMIKNPK----VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  V D+    PK    V+ ED     A +++ Q+ I+ L VV+   +  GI+   DLL
Sbjct: 115 RSKKVNDI--LPPKAALQVLHEDDTTLDACKMMIQNTITGLPVVNKEGRLTGIISRSDLL 172



 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/89 (16%), Positives = 33/89 (37%), Gaps = 10/89 (11%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN----------TLSVEDVMIKNPKVILEDTLLTVAM 306
           +D+ + L+  + + D+       +              +  +M KN         L    
Sbjct: 6   IDKKESLEFHVNDKDLKFMMTDHIFHISNAQRMEYNPPLHKIMSKNMVGCKPGDTLEHVF 65

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++ ++    L VVD+    +GIV   D+
Sbjct: 66  KVMVKYGYKRLPVVDENYTLLGIVTDRDI 94



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 32/74 (43%), Gaps = 6/74 (8%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                +D++    ++ ++      +DA  ++ +     + VV++  +L GII+  D+   
Sbjct: 115 RSKKVNDILPPKAALQVLHEDDTTLDACKMMIQNTITGLPVVNKEGRLTGIISRSDLLDQ 174

Query: 276 FHKDLNTLSVEDVM 289
           F +      + + M
Sbjct: 175 FIR------IAEPM 182


>gi|239927088|ref|ZP_04684041.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
 gi|291435435|ref|ZP_06574825.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
 gi|291338330|gb|EFE65286.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 139

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVM 289
           V     + +   I+ ++  G V V D G +L+G++T+ D+  R+  +  D    +V    
Sbjct: 16  VGPHTSVAEVARIMRDRDLGAVLVTD-GDRLRGLVTDRDLVVRSVSRGGDPEETTVAGAC 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++   +  D  L    +L+R+H +  + VVD     +GIV   DL
Sbjct: 75  SEDLVTVGPDDDLDRVARLMREHAVRRVPVVD-GGHPVGIVALGDL 119



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T  V D+M   P  +   T +    +++R  ++  ++V D   +  G+V   DL+
Sbjct: 2   TQHVRDIMTGAPVSVGPHTSVAEVARIMRDRDLGAVLVTDGD-RLRGLVTDRDLV 55


>gi|226310926|ref|YP_002770820.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
 gi|226093874|dbj|BAH42316.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
          Length = 288

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 79/192 (41%), Gaps = 7/192 (3%)

Query: 7   HFKSVTRKG--HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
                T +G    +M   +V+  ++++      + S++ +L    + +   AV+ +   +
Sbjct: 78  DLTKQTARGSYQEIMMEGSVESIMQAVSW--NNIQSIQDTLSVLSNEEVKKAVDVLSVAR 135

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            ++ + G+G S  I   +    +             A       +T  D++I +S+SG +
Sbjct: 136 -KIDVYGVGASAVIADDIRQKFSRINLWCEAYSDFHAQLTSAVTLTEKDVVIGISYSGQT 194

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           +++   L  A++    +I +T    S VA  A+I L      +S   G     S I QL 
Sbjct: 195 EDIIQSLTEAKQQGATIITLTKFGPSPVAELANIRLFTSSVEKSIRSGA--MASRIAQLN 252

Query: 185 IGDALAIALLES 196
           + D L I ++  
Sbjct: 253 VIDILFITMISR 264


>gi|126668936|ref|ZP_01739877.1| predicted DNA-binding transcriptional regulator [Marinobacter sp.
           ELB17]
 gi|126626599|gb|EAZ97255.1| predicted DNA-binding transcriptional regulator [Marinobacter sp.
           ELB17]
          Length = 295

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ + Q   +     A++ +   K ++   G+G S  +             P     
Sbjct: 115 MASLDKARQTLDAKALAQAIDSLIQAK-QISFFGMGASASVAMDAQHKFFRFNIPVTTYD 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A             D+I+ +S++G + E   I   AR     +I IT   +S +A  + 
Sbjct: 174 DALIQRMVAAGSHVGDVIVAISYTGRTRETVEIAQIARDNGATVIGIT-NPQSPLAAVSS 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +VL  P           P +S I+QL + D LA  +   R 
Sbjct: 233 VVL--PVISPEDTEVYMPMSSRIIQLTVIDILATGVTLKRG 271


>gi|238793363|ref|ZP_04636989.1| RpiR family regulatory protein [Yersinia intermedia ATCC 29909]
 gi|238727332|gb|EEQ18860.1| RpiR family regulatory protein [Yersinia intermedia ATCC 29909]
          Length = 286

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 70/188 (37%), Gaps = 15/188 (7%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   V  I   + RV I GI  
Sbjct: 87  ALHNSISSEDSLMVMAQKLAHEKTASIMETTRKINFSVFQQVVSLINTAQ-RVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IVLS++G   +++     A
Sbjct: 146 SGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMRIAATVA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESISDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESRNFSEN 202
           + R  +  
Sbjct: 264 QQRKETAK 271


>gi|269964030|ref|ZP_06178336.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831249|gb|EEZ85402.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 626

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 61/150 (40%), Gaps = 14/150 (9%)

Query: 202 NDFYVLHPGGKL---GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV- 257
            D   L         G  F  A            ++    + +A  +++E+    + +V 
Sbjct: 129 EDSARLRTAVSNHSDGNDFTTAKARKILSREPVTLEATATVREAAILMAEEGVTALLIVR 188

Query: 258 -------DEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQL 308
                  D+  +L GI+TE D+  R   +  +  + V +VM  +   +     +  AM  
Sbjct: 189 VQEDITEDDDDQLLGILTEKDLCVRVLAEGRDSDIPVSEVMSYDVVSLDYSAYVFEAMLT 248

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++N+  L ++   +K IG++   D++R+
Sbjct: 249 MLRYNVHHLPIL-KDKKPIGVISMTDIVRY 277


>gi|15966312|ref|NP_386665.1| hypothetical protein SMc02460 [Sinorhizobium meliloti 1021]
 gi|307307782|ref|ZP_07587511.1| transcriptional regulator, RpiR family [Sinorhizobium meliloti
           BL225C]
 gi|307317444|ref|ZP_07596884.1| transcriptional regulator, RpiR family [Sinorhizobium meliloti
           AK83]
 gi|15075583|emb|CAC47138.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306897033|gb|EFN27779.1| transcriptional regulator, RpiR family [Sinorhizobium meliloti
           AK83]
 gi|306901648|gb|EFN32250.1| transcriptional regulator, RpiR family [Sinorhizobium meliloti
           BL225C]
          Length = 296

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   AV+ +     R+   G G SG +           G P      A      + M+  
Sbjct: 131 QVDRAVDALAKA-NRIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKP 189

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ +V+S +G++  +      AR     +I I       +    DIVL    E     +
Sbjct: 190 GDVAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLM--VETLENTN 246

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              PT S I  L + D L+ ++   R 
Sbjct: 247 IYTPTISRIAALTVVDILSTSVALRRG 273


>gi|99078228|ref|YP_611486.1| signal-transduction protein [Ruegeria sp. TM1040]
 gi|99035366|gb|ABF62224.1| putative signal-transduction protein with CBS domains [Ruegeria sp.
           TM1040]
          Length = 174

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/117 (16%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +      +  +     +  A+ +L ++  G + V +    L GI++E DI R        
Sbjct: 39  LASKNGELYWINPEDTVAKAVEVLRDRGIGALLVKNAQGDLVGILSERDIVRRLADTPGA 98

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +VE +M ++      D  +   ++L+       + V+ + ++ +G++   D++
Sbjct: 99  TLPQTVEGLMSRDVITATTDQSVVEVLRLMTDGRFRHMPVL-EQEQLVGMITIGDVV 154



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 282 TLSVEDV-MIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +V DV   KN     I  +  +  A+++LR   I  L+V +     +GI+   D++R
Sbjct: 32  RATVGDVLASKNGELYWINPEDTVAKAVEVLRDRGIGALLVKNAQGDLVGILSERDIVR 90


>gi|311107598|ref|YP_003980451.1| hypothetical protein AXYL_04417 [Achromobacter xylosoxidans A8]
 gi|310762287|gb|ADP17736.1| CBS domain pair family protein 3 [Achromobacter xylosoxidans A8]
          Length = 146

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
            +  S+  V     + +A+ I++E+  G V VV +G  + G++TE D  R      +   
Sbjct: 11  KANHSVVTVSPDASVFEAVKIMAERSIGAVVVV-QGDAVLGMLTERDYARKIVLQDRSSR 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V D+M  +   +         M ++ + +   L V+ +  K IG++   DL++
Sbjct: 70  TTKVRDIMTDSVYYVGRADTREHCMAMMTERHFRHLPVI-EDGKLIGLLSIGDLVK 124



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 8/56 (14%), Positives = 25/56 (44%), Gaps = 5/56 (8%)

Query: 283 LSVEDV----MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +V ++       +   +  D  +  A++++ + +I  ++VV      +G++   D
Sbjct: 2   KTVAEILREKANHSVVTVSPDASVFEAVKIMAERSIGAVVVV-QGDAVLGMLTERD 56


>gi|304385980|ref|ZP_07368321.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
 gi|304327903|gb|EFL95128.1| RpiR family phosphosugar-binding transcriptional regulator
           [Pediococcus acidilactici DSM 20284]
          Length = 278

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 2/131 (1%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K+      V   GIG S  +   L       G P            +  M     +++++
Sbjct: 123 KLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAE--MSKGRGVVVLI 180

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + E   +L  AR   +P++AIT    S +A  + +VL      E      A TTS
Sbjct: 181 SNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRSAATTS 240

Query: 179 AIMQLAIGDAL 189
            + QL + D L
Sbjct: 241 LMAQLYVVDLL 251


>gi|88601910|ref|YP_502088.1| peptidase M50 [Methanospirillum hungatei JF-1]
 gi|88187372|gb|ABD40369.1| peptidase M50 [Methanospirillum hungatei JF-1]
          Length = 377

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 2/103 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    PL + ++++ + +     V  E   L GIIT  D+ R    D + + V DVM ++
Sbjct: 268 VPPRMPLSEVLSLMYQTKHLGFPVT-ELGHLVGIITLTDLARTPVLDRDAMQVRDVMSRD 326

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V+     +  A++++ + +I  + V+   +K IGIV   D+
Sbjct: 327 VVVLPPHAPVMDALRIMTRQDIGRIPVM-AEEKIIGIVTKSDI 368



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 23/58 (39%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  ++V  +M +    +     L+  + L+ Q       V  +    +GI+   DL R
Sbjct: 252 LKDVTVGQIMSRPVVEVPPRMPLSEVLSLMYQTKHLGFPVT-ELGHLVGIITLTDLAR 308



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               + ++    P++DA+ I++ +  G + V+ E  K+ GI+T+ DI
Sbjct: 323 MSRDVVVLPPHAPVMDALRIMTRQDIGRIPVMAEE-KIIGIVTKSDI 368


>gi|222478534|ref|YP_002564771.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222451436|gb|ACM55701.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 135

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 41/111 (36%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
               I  V     + DA  +L +       VVD+   L GI+T  D      K       
Sbjct: 13  MTSDIHTVTPDTLVEDAAAVLLDNDISSALVVDDDGALVGILTTTDFVDIVAKSQPKAET 72

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +VE  M ++P        ++    L+ +H    + VVD     IGI+   D
Sbjct: 73  TVERYMTRDPITAGAQDSVSAVASLMVEHGFHHVPVVDGD-TPIGIITTSD 122



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++ + V  +M  +   +  DTL+  A  +L  ++IS  +VVDD    +GI+   D +
Sbjct: 3   EIDDVFVARLMTSDIHTVTPDTLVEDAAAVLLDNDISSALVVDDDGALVGILTTTDFV 60


>gi|89099931|ref|ZP_01172802.1| hypothetical protein B14911_15745 [Bacillus sp. NRRL B-14911]
 gi|89085323|gb|EAR64453.1| hypothetical protein B14911_15745 [Bacillus sp. NRRL B-14911]
          Length = 241

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 67/174 (38%), Gaps = 11/174 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS FK   +      + + ++ +  S          LE +L+G+L      A   +    
Sbjct: 59  FSEFKVKLKMELKEQQGANIKSSRES------AAEFLERALKGDLEESIAKASRLVAEAD 112

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGS 123
             V+  GIG SG +    A   +S G  S ++       H       ++ ++I LS SG 
Sbjct: 113 S-VIFIGIGSSGILAEYGARYFSSLGAFSLYIKDPHFPIHSKW---QKNSVVIALSVSGE 168

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +    A L   ++    +I+IT+   S +A  +D+ ++     E        T 
Sbjct: 169 TPFTVAHLNRLKQEGSRVISITNNRASTIAKISDLNISYYVSEEFMGESNITTQ 222


>gi|84499253|ref|ZP_00997541.1| CBS domain protein [Oceanicola batsensis HTCC2597]
 gi|84392397|gb|EAQ04608.1| CBS domain protein [Oceanicola batsensis HTCC2597]
          Length = 144

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 43/107 (40%), Gaps = 2/107 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +         + +A  +++E+  G + V++E  +  G++T+ DI             
Sbjct: 7   MTSNPTCCGGNTTIQEAAKLMAEQSIGALPVLNEAGEPIGVVTDRDICCGAVAEGKSGAT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +V DVM  +      D  ++     + +  +   +V D+  K  G+V
Sbjct: 67  AVSDVMSTDVLTTTADEEVSSCCNKMEERQVRRAVVTDEEGKCCGMV 113



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 30/53 (56%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D+M  NP     +T +  A +L+ + +I  L V+++  + IG+V   D+
Sbjct: 1   MQVQDIMTSNPTCCGGNTTIQEAAKLMAEQSIGALPVLNEAGEPIGVVTDRDI 53


>gi|319651873|ref|ZP_08005997.1| acetoin dehydrogenase [Bacillus sp. 2_A_57_CT2]
 gi|317396432|gb|EFV77146.1| acetoin dehydrogenase [Bacillus sp. 2_A_57_CT2]
          Length = 215

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                + DAI I++EKR   + + DE  +L+G++T+ DI             K+     +
Sbjct: 15  SKEDTIADAIKIMNEKRIRHLPITDEAGRLQGLVTDRDIRDATPSIFHTELFKEDLQRPL 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +M  +               +  +  I  L +++D  K +GIV   DLL
Sbjct: 75  KMIMKTDIITGHPLDFAEEIAAVFYEQRIGCLPILNDD-KLVGIVTETDLL 124



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M  +   + ++  +  A++++ +  I  L + D+  +  G+V   D+
Sbjct: 3   VEEIMKTDVTALSKEDTIADAIKIMNEKRIRHLPITDEAGRLQGLVTDRDI 53


>gi|218548586|ref|YP_002382377.1| DNA-binding transcriptional regulator HexR [Escherichia fergusonii
           ATCC 35469]
 gi|218356127|emb|CAQ88744.1| putative DNA-binding transcriptional regulator [Escherichia
           fergusonii ATCC 35469]
 gi|324113589|gb|EGC07564.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia fergusonii B253]
 gi|325497004|gb|EGC94863.1| DNA-binding transcriptional regulator HexR [Escherichia fergusonii
           ECD227]
          Length = 289

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S         H++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTLYVNHNVNEDDSVESYTRKIFESAMASLDHVRQSLDNT---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  +  +   AR     +IAITS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNVVELAQLARENDAMVIAITS-PGTPLALEATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|71907424|ref|YP_285011.1| CBS [Dechloromonas aromatica RCB]
 gi|71847045|gb|AAZ46541.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 144

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMIKN 292
           G  + +A  I+ E     + ++D+   L GI TE DI  R      D    ++  +M +N
Sbjct: 21  GTTVREAAIIMKEWHSSAILIIDK-GLLAGICTERDIVFRAVANGCDPANTAITTIMTRN 79

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +  D     A+ L+ +     + VVDD    +G++   D L
Sbjct: 80  IQTVSPDKPFGHALHLMYEGGFRHIPVVDDAGHPVGLLAAHDAL 123



 Score = 36.0 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 19/46 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
              +I  V    P   A+ ++ E  F  + VVD+     G++   D
Sbjct: 76  MTRNIQTVSPDKPFGHALHLMYEGGFRHIPVVDDAGHPVGLLAAHD 121


>gi|86140826|ref|ZP_01059385.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Leeuwenhoekiella blandensis MED217]
 gi|85832768|gb|EAQ51217.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Leeuwenhoekiella blandensis MED217]
          Length = 634

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMI 290
                 +  A   +S +  G + V  E  K  GIIT  D+          +S  V+ +M 
Sbjct: 178 CSPDTTIKVAAKKMSHRDVGSIVVTHEE-KPVGIITNRDLRDRIATGDFDISDSVDKIMS 236

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
           K  K   +D  +  A  ++ ++ ++ L + +D     K +G++   D++
Sbjct: 237 KPVKCFQKDPTVAQAQLIMLKNEVNHLCITEDGTPDTKLLGLITEHDIV 285



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            KN      DT + VA + +   ++   +VV   +K +GI+   DL
Sbjct: 172 SKNILTCSPDTTIKVAAKKMSHRDVGS-IVVTHEEKPVGIITNRDL 216


>gi|119475195|ref|ZP_01615548.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2143]
 gi|119451398|gb|EAW32631.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2143]
          Length = 285

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 66/178 (37%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  +  ++   +    L+ +  SL          A++K     GRV   G G S  + +
Sbjct: 92  DSAREYTIKVFDSAIDTLTKVRDSLDTRAIEAAISALQK----AGRVEFYGFGGSSSVAT 147

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                      PS               +   D+++ +S SG +  L   +   +     
Sbjct: 148 DAQHKFFRLQIPSSAHSDPHIQAMSAMSLKPGDVVVAISQSGRTQALIDAMGLVKEAGAT 207

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +I + + + + VA   DI L +  + +   +   P  S +  +A+ D LA+ +  ++ 
Sbjct: 208 IIGL-APSNTPVALRCDIPLHIDVKEDIEKYTPLP--SRMAHMAVMDILAVGVSRAKG 262


>gi|111221086|ref|YP_711880.1| hypothetical protein FRAAL1636 [Frankia alni ACN14a]
 gi|111148618|emb|CAJ60291.1| hypothetical protein; putative CBS-domains [Frankia alni ACN14a]
          Length = 266

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL 280
            V         V     +++A   +  +  G + V+D G+ L GI+T+ D+  R+  + +
Sbjct: 3   GVRFPRHKPVTVPREMTIVEAARWMDVQGVGSLLVMD-GEDLVGIVTDRDLALRSLRRRI 61

Query: 281 -NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                VE VM +    +  D      +++ R+H +  L + D+  + +G++   D
Sbjct: 62  PFDGRVEAVMTRGVVTLDVDADPADVVRMFREHTVRRLPLTDN-GRVVGLIALDD 115


>gi|328881980|emb|CCA55219.1| hypothetical protein SVEN_1932 [Streptomyces venezuelae ATCC 10712]
          Length = 139

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
                  +     L  A  ++     G + V DE ++L GIIT+ DI         D   
Sbjct: 8   MHPGAQWIPAHETLDRAAQLMRNLNVGALPVADENERLCGIITDRDIVVGCVAMGHDPAR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  ++    P+ +     +   ++ ++ H I  L V+ + ++ +G++   DL +
Sbjct: 68  TTCGEMCKGTPRWVESGADVGAVLEEMQGHQIRRLPVI-EDKRLVGMISEADLAQ 121



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M    + I     L  A QL+R  N+  L V D+ ++  GI+   D++
Sbjct: 2   TTAKDIMHPGAQWIPAHETLDRAAQLMRNLNVGALPVADENERLCGIITDRDIV 55


>gi|325969379|ref|YP_004245571.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta moutnovskia 768-28]
 gi|323708582|gb|ADY02069.1| 6-phospho 3-hexuloisomerase [Vulcanisaeta moutnovskia 768-28]
          Length = 204

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 78/186 (41%), Gaps = 20/186 (10%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +  +++  +    F  A+  +     +V++ G G+SG +G   A  L   G  S+ + 
Sbjct: 18  ILNALNAINIKDVESFINALINVYKNDRKVLVVGAGRSGLVGRAFAMRLMHLGFRSYVLG 77

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DL++ +S SG++  + A    A+R    +IAITS   S +A +AD
Sbjct: 78  ETITP-----SVGEGDLVVAISGSGTTTMVVAAAEAAKRMKAMIIAITSYRDSPLASYAD 132

Query: 158 IVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSEN 202
           +V+ +P   +                  LAP  +      + + DA+   L+     +E+
Sbjct: 133 LVVQVPGRTKVAKMDDYFARQILGLHEPLAPLGTLFEDTTMVLLDAVIAELMYRLKKTED 192

Query: 203 DFYVLH 208
           +  + H
Sbjct: 193 EIRMRH 198


>gi|226310959|ref|YP_002770853.1| hypothetical protein BBR47_13720 [Brevibacillus brevis NBRC 100599]
 gi|226093907|dbj|BAH42349.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 436

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             VVDE  +L GI+T  DI  +      T  ++ VM KNP        +  +   +    
Sbjct: 225 FPVVDEQMRLIGIVTSKDIIGHEE----TAIIDKVMTKNPITTSPRVSVASSAHTMVWEG 280

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I +L VVD+ +K +G++   D+L+ 
Sbjct: 281 IELLPVVDNHRKLVGVLSRNDVLKA 305


>gi|332705805|ref|ZP_08425881.1| bacteriophytochrome light-regulated signal transduction histidine
           kinase [Lyngbya majuscula 3L]
 gi|332355597|gb|EGJ35061.1| bacteriophytochrome light-regulated signal transduction histidine
           kinase [Lyngbya majuscula 3L]
          Length = 394

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 8/113 (7%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVM 289
           +V     + +AI  + +       +V     L GI TE D+ +   +   L+ L++ DVM
Sbjct: 15  IVSPETLVTEAIARMIQFD-SSYVLVQSQLSLVGIFTERDLLKVIVEGIGLSGLAIADVM 73

Query: 290 IKNPKVILEDTL-----LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +    +     +   +  LRQH I  L VV+D  +  GI+    LL+
Sbjct: 74  TTELITLPATEVENVENIVKLLSRLRQHRIRHLPVVEDSGRPTGIITENSLLQ 126


>gi|257053301|ref|YP_003131134.1| putative signal transduction protein with CBS domains [Halorhabdus
           utahensis DSM 12940]
 gi|256692064|gb|ACV12401.1| putative signal transduction protein with CBS domains [Halorhabdus
           utahensis DSM 12940]
          Length = 139

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF--HKDLNTLSVEDVMI 290
           +   P+ +    +  +  G V + D+     GI+T+ D+  R     +D    +  DVM 
Sbjct: 15  QPETPVTELAGRMDAEDVGSVVITDDD-TPVGIVTDRDLAIRVLGKERDRTETTAADVMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + K I  D     A  L+    I  L V D  +   GIV   DL   
Sbjct: 74  ADLKTIEADAGFYEATNLMSDAGIRRLPVTDGDE-LTGIVTADDLTEL 120


>gi|119188897|ref|XP_001245055.1| hypothetical protein CIMG_04496 [Coccidioides immitis RS]
          Length = 551

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P          AP  S+ M      ++AI +            V+H       
Sbjct: 73  SDVNLESPVTKRISL--KAPLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADD 125

Query: 216 LFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L    +     + +A  + ++  FG   V + G    KL GI+T
Sbjct: 126 QAEMVRKVKRFENGFILDPVVISPKTTVAEAKELKAQWGFGGFPVTENGTLRSKLVGIVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH DL+   V  VM  +       T L  A ++LR+     L +VD     + 
Sbjct: 186 SRDI--QFHPDLDE-PVTAVMSTDLVTAPAGTTLAEANEVLRRSKKGKLPIVDTDGNLVS 242

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 243 LLSRTDLMK 251



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             G  L +A  +L   + G + +VD    L  +++  D+ +N H  L++ 
Sbjct: 211 PAGTTLAEANEVLRRSKKGKLPIVDTDGNLVSLLSRTDLMKNLHYPLSSK 260


>gi|116493693|ref|YP_805427.1| transcriptional regulator [Lactobacillus casei ATCC 334]
 gi|116103843|gb|ABJ68985.1| Transcriptional regulator [Lactobacillus casei ATCC 334]
          Length = 289

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 64/184 (34%), Gaps = 5/184 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
               + KN+T+    + ++ +     SL  ++           +  I     R+++ G+G
Sbjct: 82  DDQEIQKNATLTTIKQKLLIDAN--QSLRETVDQINEANVDTIINLIHQSD-RLLVFGVG 138

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT-RDDLIIVLSWSGSSDELKAILY 132
            S      +A      G P  F                   L   +S SG S E+     
Sbjct: 139 ASYLAAQNIAQKWGRLGYPCHFSDDLNLFLPLAATADVEQTLCWFISNSGESPEVVLAAK 198

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
            A++  + +I  T   K+ +  +AD+ +    +P    +  A T S   Q  + D L  A
Sbjct: 199 LAKKAGLQVIVTTKLGKNSLTKYADVSIQTS-QPMEARNRFAATQSLHTQFMLIDILYYA 257

Query: 193 LLES 196
            +  
Sbjct: 258 YVSR 261


>gi|209694326|ref|YP_002262254.1| inosine 5'-monophosphate dehydrogenase [Aliivibrio salmonicida
           LFI1238]
 gi|208008277|emb|CAQ78422.1| inosine-5'-monophosphate dehydrogenase [Aliivibrio salmonicida
           LFI1238]
          Length = 487

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 65/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEEVRLVKIFEAGVV---SAP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D   +  +  F    VV E  +L GIIT  D+   F  DL+   V+ VM 
Sbjct: 98  VTVRPDATIQDVKDLTEKHGFAGFPVVTETNELVGIITGRDVR--FVTDLSK-KVDVVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKSRLASVKEGATREEVQEKMHEARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|11497944|ref|NP_069168.1| hypothetical protein AF0332 [Archaeoglobus fulgidus DSM 4304]
 gi|2650306|gb|AAB90905.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 362

 Score = 76.5 bits (187), Expect = 5e-12,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 50/127 (39%), Gaps = 6/127 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L  +             +  V     + + I ++ + +     VV EG++L GIIT  DI
Sbjct: 225 LENVLGRVRVADVMNTEVVTVTPEMTVSEVIDLILKTKHLGFPVV-EGERLVGIITLHDI 283

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                       V ++M +    +  +     A +++ +  I  L VV +  + +GIV  
Sbjct: 284 IGV----EPEERVGNIMSREVVAVSPNQSAFEAFKIMSEMGIGRLPVV-EHGRVVGIVSR 338

Query: 333 LDLLRFG 339
            DL+R  
Sbjct: 339 SDLMRIK 345


>gi|270292339|ref|ZP_06198550.1| CBS domain protein [Streptococcus sp. M143]
 gi|270278318|gb|EFA24164.1| CBS domain protein [Streptococcus sp. M143]
          Length = 218

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVITVSGYASLEDATYLMLKNKIGILPVVDNQQ-VYGVITDRDVFQA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD  Q++ G+IT+ D+F+ F
Sbjct: 81  MIRDVITVSGYASLEDATYLMLKNKIGILPVVD-NQQVYGVITDRDVFQAF 130


>gi|303323491|ref|XP_003071737.1| inosine-5'-monophosphate dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|240111439|gb|EER29592.1| inosine-5'-monophosphate dehydrogenase, putative [Coccidioides
           posadasii C735 delta SOWgp]
 gi|320035126|gb|EFW17068.1| IMP dehydrogenase [Coccidioides posadasii str. Silveira]
          Length = 551

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 69/189 (36%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P          AP  S+ M      ++AI +            V+H       
Sbjct: 73  SDVNLESPVTKRISL--KAPLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADD 125

Query: 216 LFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L    +     + +A  + ++  FG   V + G    KL GI+T
Sbjct: 126 QAEMVRKVKRFENGFILDPVVISPKTTVAEAKELKAQWGFGGFPVTENGTLRSKLVGIVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH DL+   V  VM  +       T L  A ++LR+     L +VD     + 
Sbjct: 186 SRDI--QFHPDLDE-PVTAVMSTDLVTAPAGTTLAEANEVLRRSKKGKLPIVDTDGNLVS 242

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 243 LLSRTDLMK 251



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             G  L +A  +L   + G + +VD    L  +++  D+ +N H  L++ 
Sbjct: 211 PAGTTLAEANEVLRRSKKGKLPIVDTDGNLVSLLSRTDLMKNLHYPLSSK 260


>gi|254785439|ref|YP_003072868.1| nucleotidyl transferase [Teredinibacter turnerae T7901]
 gi|237686420|gb|ACR13684.1| nucleotidyl transferase [Teredinibacter turnerae T7901]
          Length = 354

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 2/105 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              L+     + DAI  L         VV    +L G +T+GDI R   K +  T  +  
Sbjct: 9   RSALLDANASIRDAIESLDRSSLQIALVVSPELQLLGTVTDGDIRRALIKGVELTSPING 68

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           VM + P V+      T  +QL++ + I  L  V++  +  G +H 
Sbjct: 69  VMNQRPLVVPPKLGKTAVLQLMQANKILQLPEVNEHGQVCG-LHL 112


>gi|222616000|gb|EEE52132.1| hypothetical protein OsJ_33959 [Oryza sativa Japonica Group]
          Length = 542

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 4/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
             L    S +  +  ++ +V  G  ++ A   + E      AVV  G K +GI+T  D +
Sbjct: 202 QMLRPSLSTITTAESTVVIVSPGDSVLTATQKMVE-VHASSAVVAVGNKAQGILTSRDIL 260

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L  ++  VE VM  +P+    D  +  A++++++     L V+D     + I+
Sbjct: 261 MRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRIMQERKFLHLPVMDRDGSIVSIL 320

Query: 331 HFLDLLRF 338
             +D+   
Sbjct: 321 DVIDITHA 328



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           V     +++A   ++ +R     + D    L GI+T+ DI  R   ++L         VM
Sbjct: 54  VPESTTVLEACRRMAARRADAALLTDSNALLCGILTDKDIATRVIARELKIEETPAWKVM 113

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +  +TL   A+  + Q     L VV++ +    ++  LD+ +
Sbjct: 114 TRHPVFVPSETLAVEALHKMVQGKFRHLPVVENGE----VIAMLDIAK 157


>gi|15679542|ref|NP_276659.1| hypothetical protein MTH1546 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622667|gb|AAB86020.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 254

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 71/201 (35%), Gaps = 27/201 (13%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            ++ A+R II     L  +E  +       F      I      V + G+G+SG +    
Sbjct: 62  IIKEAIRDII---HNLEKMERDIDERTLDNFIE----ILTSAANVFVLGLGRSGLVARAF 114

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A  L      +F V            I   D++I +S SG +  +      AR     ++
Sbjct: 115 AMRLMHLEINAFVVGETITP-----AINEGDVLIAISGSGRTSYIVNAASIARERGAKVV 169

Query: 143 AITSENKSVVACHADIVLTL-------------PKEPESCPHGLAPTTSAIM--QLAIGD 187
           A+TS   S +A  AD+ +T+              ++     H   P  +      L   D
Sbjct: 170 AVTSYPDSDLAGLADLTVTIKGRTKIDGEKDYMKRQMRGNHHSRTPLGTLFEISALVFLD 229

Query: 188 ALAIALLESRNFSENDFYVLH 208
            +   L+E  +  E D +  H
Sbjct: 230 GIIAELMERFDKREEDLHHRH 250


>gi|302037447|ref|YP_003797769.1| hypothetical protein NIDE2124 [Candidatus Nitrospira defluvii]
 gi|300605511|emb|CBK41844.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 153

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 49/124 (39%), Gaps = 24/124 (19%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----------------- 279
             + D +  +  +  G + +V+  ++L GI+T  D+    + +                 
Sbjct: 18  DTVRDVVVKMLSRHCGAIPIVNASRELLGIVTLRDVMLPMYPNYGEYIHDSVHSRDFLEM 77

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +   S E++M++NP  +  +T +  A   +   N   L V D   K +G+V   
Sbjct: 78  EQNYPEVLGKSAEEIMVRNPLTVSPETPILEAASYMGLKNFRRLPVADH-GKLVGMVSIG 136

Query: 334 DLLR 337
           D+ R
Sbjct: 137 DIHR 140



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 22/54 (40%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + DVM            +   +  +   +   + +V+  ++ +GIV   D++
Sbjct: 1   MRIHDVMSTGVVTGQPMDTVRDVVVKMLSRHCGAIPIVNASRELLGIVTLRDVM 54


>gi|84496283|ref|ZP_00995137.1| CBS:HPP [Janibacter sp. HTCC2649]
 gi|84383051|gb|EAP98932.1| CBS:HPP [Janibacter sp. HTCC2649]
          Length = 197

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/119 (28%), Positives = 49/119 (41%), Gaps = 13/119 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLN---------- 281
           +    PL  AI +L+ +R   + VVDE  ++ GIITEGDI R    +D            
Sbjct: 14  IHPDAPLEAAIDVLARERVSALPVVDEDHQVVGIITEGDILRLRLPEDPRAHLRPTRPMP 73

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V DVM   P+        +     L +     + VVDD    +G+V   D +R 
Sbjct: 74  TVDQRVRDVMSAEPECATAHQDSSHVALTLSRRGWKSMPVVDDHGALVGMVSRSDFVRA 132



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++M    + I  D  L  A+ +L +  +S L VVD+  + +GI+   D+LR  +
Sbjct: 3   IAELMTTAVESIHPDAPLEAAIDVLARERVSALPVVDEDHQVVGIITEGDILRLRL 58



 Score = 39.5 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 2/82 (2%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             L P   + T+     DVM +                   LS + +  + VVD+   L 
Sbjct: 64  AHLRPTRPMPTVDQRVRDVMSAEPECATAHQDSS--HVALTLSRRGWKSMPVVDDHGALV 121

Query: 265 GIITEGDIFRNFHKDLNTLSVE 286
           G+++  D  R   +   T+   
Sbjct: 122 GMVSRSDFVRALARPDTTIEAA 143


>gi|254739860|ref|ZP_05197552.1| CBS domain protein [Bacillus anthracis str. Kruger B]
          Length = 139

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               I        + +A   + E+  G + VV E +++ G++ + D+       K   + 
Sbjct: 8   MSTHIVQCTPLDNVYEAAVKMKEESIGLIPVV-ENEQVVGLVXDRDLVVRGIAEKHPGSN 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +VM  N   +  D  L  A +L+ QH I  L VV+  Q  +G++   DL
Sbjct: 67  KITNVMTTNIISVAPDDSLEKATELMAQHQIRRLPVVESDQ-LVGMLALGDL 117



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             V DVM  +         +  A   +++ +I ++ VV++ Q  +G+V   DL+  GI
Sbjct: 2   TRVRDVMSTHIVQCTPLDNVYEAAVKMKEESIGLIPVVENEQ-VVGLVXDRDLVVRGI 58


>gi|221231550|ref|YP_002510702.1| hypothetical protein SPN23F_06770 [Streptococcus pneumoniae ATCC
           700669]
 gi|220674010|emb|CAR68523.1| conserved hypothetical protein [Streptococcus pneumoniae ATCC
           700669]
          Length = 218

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ IS+L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKISILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55


>gi|53802426|ref|YP_112825.1| inosine-5'-monophosphate dehydrogenase [Methylococcus capsulatus
           str. Bath]
 gi|53756187|gb|AAU90478.1| inosine-5'-monophosphate dehydrogenase [Methylococcus capsulatus
           str. Bath]
          Length = 487

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 63/171 (36%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI + +         +        ++ ++    S V+      
Sbjct: 40  NIPLLSAAMDTVTEARLAITIAQEGGIGIIHKNMTTERQAAEVRSVKKYESGVI---KEP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + + +   +    V VVD G +L GI+T  D+     +      V   M 
Sbjct: 97  ITVPPTATIREVMELTRARNISGVPVVD-GGELVGIVTSRDLRF---ETRYEEPVTRAMT 152

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E +    A++LL QH I  +++V++  +  G++   D+ +  
Sbjct: 153 PKERLVTVQEGSSKEEAIRLLHQHRIEKVLIVNEAFQLRGMITVKDIQKSK 203


>gi|298674000|ref|YP_003725750.1| putative signal transduction protein [Methanohalobium evestigatum
           Z-7303]
 gi|298286988|gb|ADI72954.1| putative signal transduction protein with CBS domains
           [Methanohalobium evestigatum Z-7303]
          Length = 353

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 51/126 (40%), Gaps = 3/126 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            G L    +  +       +V +     + DAI  ++ K  G + +VDE  ++  I TE 
Sbjct: 149 NGNLIAAINAEIREIMENDIVYLHNTDSIDDAIDTMNTKNIGGLPIVDEDNRVHAICTER 208

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D  +         SV + M KN   +  +  +  A +++       L VV D    +GIV
Sbjct: 209 DFLQFIDGVYTNKSVGEYMNKNVMRVKSNATIEDAAKIMMNEGFRRLPVVKDS-ILLGIV 267

Query: 331 HFLDLL 336
              +++
Sbjct: 268 TATNIM 273



 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 65/152 (42%), Gaps = 20/152 (13%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF     G     ++   S   +   ++  VK    + DA  I+  + F  + VV +
Sbjct: 206 TERDFLQFIDG-----VYTNKSVGEYMNKNVMRVKSNATIEDAAKIMMNEGFRRLPVV-K 259

Query: 260 GQKLKGIITEGDIF------RNFHKDLN-------TLSVEDVMIKNPKVILEDTLLTVAM 306
              L GI+T  +I       + F K +           +  ++ K+      DT L  A 
Sbjct: 260 DSILLGIVTATNIMNYLGSGKAFEKLITGNVHEPLNEPISSMITKDVVWTTSDTDLGEAA 319

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L++++N+  L ++D+  + IGI+   D L+ 
Sbjct: 320 RLMQENNVGSLPIIDN-GQFIGIITERDFLKA 350



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 49/133 (36%), Gaps = 17/133 (12%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN 281
           +  +   +  V     ++ AI  +  K F  + + D G  +L+GI+T  DI         
Sbjct: 81  MAIAKRDVITVPPTTTIMGAIKTMMNKGFRRIPITDAGTNRLEGIVTSVDIINFMGGGDK 140

Query: 282 TLSVE----------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            L VE                ++M  +   +     +  A+  +   NI  L +VD+  +
Sbjct: 141 NLLVENHYNGNLIAAINAEIREIMENDIVYLHNTDSIDDAIDTMNTKNIGGLPIVDEDNR 200

Query: 326 AIGIVHFLDLLRF 338
              I    D L+F
Sbjct: 201 VHAICTERDFLQF 213



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 11/41 (26%), Positives = 19/41 (46%), Gaps = 1/41 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              L +A  ++ E   G + ++D   +  GIITE D  +  
Sbjct: 312 DTDLGEAARLMQENNVGSLPIID-NGQFIGIITERDFLKAI 351


>gi|149190081|ref|ZP_01868358.1| inositol-5-monophosphate dehydrogenase [Vibrio shilonii AK1]
 gi|148836111|gb|EDL53071.1| inositol-5-monophosphate dehydrogenase [Vibrio shilonii AK1]
          Length = 487

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 67/170 (39%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +     F   +  +     ++  + +  + V+    + 
Sbjct: 41  NIPMISASMDTVTEARLAIALAQEGGIGFIHKNMSIEQQAEQVRLVKIFEAGVV---TNP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    + D + +  +  F    VV E  +L GIIT  D+   F  DL+   VE VM 
Sbjct: 98  VTVRPEATIADVMALTEKHGFAGFPVVTETNELVGIITGRDVR--FVTDLSK-KVEVVMT 154

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 155 PKARLASVKEGASREEVQEEMHRARVEKVLVVNDEFQLTGMITAKDFHKA 204


>gi|33864986|ref|NP_896545.1| putative sugar-phosphate nucleotide transferase [Synechococcus sp.
           WH 8102]
 gi|33638670|emb|CAE06965.1| putative sugar-phosphate nucleotide transferase [Synechococcus sp.
           WH 8102]
          Length = 352

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDV 288
             L+       DA+ +LS   +    V     ++ GI+T+ D+ +   + +    +V  V
Sbjct: 13  KVLISEDLSFNDALKVLSAGGYQIALVQKANGRVAGIVTDSDVRKALLRGVRLDDTVSLV 72

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           M  +PKVIL  ++      L++  N+  L +VDD  +  G+
Sbjct: 73  MNTDPKVILSRSIPHDINGLMKNQNVFHLPIVDDQNRFEGL 113


>gi|94310403|ref|YP_583613.1| inosine 5'-monophosphate dehydrogenase [Cupriavidus metallidurans
           CH34]
 gi|93354255|gb|ABF08344.1| inosine-5'-monophosphate dehydrogenase [Cupriavidus metallidurans
           CH34]
          Length = 487

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ ++          L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAISMAQAGGIGIVH-KNLKPADQAREVQRVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + D I +  +       V+ EG+ + GIIT  D+   F ++L    V   M   
Sbjct: 99  ISPEMKVRDVIALSQQHGISGFPVL-EGKTVVGIITNRDLR--FEEEL-DAPVRAKMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ +H +  ++VV+   +  G++   D+ + 
Sbjct: 155 EKLVTVAEGAPLEEAKRLMNRHRLERVLVVNGAFELRGLITVKDIQKA 202



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 28/66 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               M   + +  V  G PL +A  +++  R   V VV+   +L+G+IT  DI +     
Sbjct: 147 VRAKMTPREKLVTVAEGAPLEEAKRLMNRHRLERVLVVNGAFELRGLITVKDIQKAVENP 206

Query: 280 LNTLSV 285
           L     
Sbjct: 207 LANKDA 212


>gi|315425958|dbj|BAJ47607.1| conserved hypothetical protein [Candidatus Caldiarchaeum
           subterraneum]
          Length = 387

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 2/125 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
                 +              P +     L    + + EK    + V  E  K  G++  
Sbjct: 55  AALWPNVNPTKVLARTLAVKTPKITPEDTLPHVASAMVEKNLKAMPVT-EAGKPVGLVAA 113

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+  N  + +  L+V+ +M K+   I  D  +  A+ ++R   +S L VV +    +GI
Sbjct: 114 ADLILNSREIIKNLTVQKIMTKDVITINADDTIGKAISIMRDQGVSRLPVV-NNGYLVGI 172

Query: 330 VHFLD 334
           V   D
Sbjct: 173 VTVTD 177



 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 51/138 (36%), Gaps = 17/138 (12%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +    +        +  +     +  AI+I+ ++    + VV+    L GI+T  D+ 
Sbjct: 121 REIIKNLTVQKIMTKDVITINADDTIGKAISIMRDQGVSRLPVVN-NGYLVGIVTVTDVA 179

Query: 274 RNFHKDLNTL---------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
               K                     V+ +M +       +  +  A++ ++Q+  S L 
Sbjct: 180 EKIIKPRTRPSLGEVAGEKARTLSNPVKSIMTREVVTARGNETVVEAVERMKQYGFSSL- 238

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VV +  + +GIV  +D L
Sbjct: 239 VVTERNRVVGIVTLMDAL 256



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 8/107 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSV--EDVM 289
           V    P    I + ++++   V V D    +L G++T+         ++N   V    + 
Sbjct: 16  VGDDEPFTKVIGLFTDRKLDVVVVKDSRSGRLVGVVTK---RAALWPNVNPTKVLARTLA 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +K PK+  EDTL  VA   + + N+  + V  +  K +G+V   DL+
Sbjct: 73  VKTPKITPEDTLPHVASA-MVEKNLKAMPVT-EAGKPVGLVAAADLI 117


>gi|119719318|ref|YP_919813.1| signal-transduction protein [Thermofilum pendens Hrk 5]
 gi|119524438|gb|ABL77810.1| putative signal-transduction protein with CBS domains [Thermofilum
           pendens Hrk 5]
          Length = 302

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 48/110 (43%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P V     L + I ++ E+  G +AVVDE  ++ GI++E  +          + V+
Sbjct: 92  KYDPPYVYTRSDLREVIELMVERGIGALAVVDEDLRVVGIVSERHVISLLANVETHVKVK 151

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++M      +     L   M+++ +  I  L +V   +   GIV   D+L
Sbjct: 152 EIMTSEVVYLSPMDSLFEGMRVMSERRIRRLPLVSGEE-LRGIVTIKDVL 200



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 47/121 (38%), Gaps = 16/121 (13%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + +V     ++D +  +   R   V +VDE   LKG+++  D+            VE
Sbjct: 13  FPPLAVVPSSSRVLDVLVAMGRNRVRHVPLVDERGVLKGMVSARDLVDFLGGRRFRDVVE 72

Query: 287 -----DVMIK-----------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                DV              +P  +   + L   ++L+ +  I  L VVD+  + +GIV
Sbjct: 73  ARFNGDVYKALEQTGVEFLKYDPPYVYTRSDLREVIELMVERGIGALAVVDEDLRVVGIV 132

Query: 331 H 331
            
Sbjct: 133 S 133



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 57/137 (41%), Gaps = 15/137 (10%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L  +             +  +     L + + ++SE+R   + +V  G++L+GI+T  D+
Sbjct: 141 LANVETHVKVKEIMTSEVVYLSPMDSLFEGMRVMSERRIRRLPLV-SGEELRGIVTIKDV 199

Query: 273 FRNFHKDLNTLSVED-------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                ++     +++             +  K    + +D  + +A+ L+++H I  L V
Sbjct: 200 LSYVSREDVLARLKEGSRSAVYDTPLVYISSKPVLAVEDDVDVGLAVSLMKKHGIGAL-V 258

Query: 320 VDDCQKAIGIVHFLDLL 336
           V    K  GIV   D+L
Sbjct: 259 VTHDGKPRGIVTERDVL 275


>gi|23013288|ref|ZP_00053201.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           +     +IDA+  ++  + G V VVDE     GI TE D+ R        +    V D M
Sbjct: 17  ILPSKAMIDAVQGMAAFKVGAVLVVDEKDNTLGIFTERDVTRCLAAHGAPVLAEPVGDHM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +NP        +   M  +  H+   + V+D+  +  GIV   DL+
Sbjct: 77  TRNPLTCQGSDTVASVMSTMSTHHFRHMPVMDN-GQMKGIVSIRDLV 122


>gi|148985896|ref|ZP_01818990.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP3-BS71]
 gi|148989833|ref|ZP_01821127.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
           SP6-BS73]
 gi|148997170|ref|ZP_01824824.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP11-BS70]
 gi|168490841|ref|ZP_02714984.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
 gi|168492903|ref|ZP_02717046.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
 gi|168575413|ref|ZP_02721349.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
 gi|169833130|ref|YP_001694216.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
 gi|194398244|ref|YP_002037400.1| acetoin utilization protein AcuB [Streptococcus pneumoniae G54]
 gi|225854262|ref|YP_002735774.1| AcuB family protein [Streptococcus pneumoniae JJA]
 gi|225856430|ref|YP_002737941.1| AcuB family protein [Streptococcus pneumoniae P1031]
 gi|307067357|ref|YP_003876323.1| CBS domain protein [Streptococcus pneumoniae AP200]
 gi|147756870|gb|EDK63910.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP11-BS70]
 gi|147922042|gb|EDK73166.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP3-BS71]
 gi|147924775|gb|EDK75859.1| hypothetical protein CGSSp6BS73_01563 [Streptococcus pneumoniae
           SP6-BS73]
 gi|168995632|gb|ACA36244.1| AcuB family protein [Streptococcus pneumoniae Hungary19A-6]
 gi|183574557|gb|EDT95085.1| AcuB family protein [Streptococcus pneumoniae CDC0288-04]
 gi|183576974|gb|EDT97502.1| AcuB family protein [Streptococcus pneumoniae CDC3059-06]
 gi|183578468|gb|EDT98996.1| AcuB family protein [Streptococcus pneumoniae MLV-016]
 gi|194357911|gb|ACF56359.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae G54]
 gi|225723390|gb|ACO19243.1| AcuB family protein [Streptococcus pneumoniae JJA]
 gi|225724721|gb|ACO20573.1| AcuB family protein [Streptococcus pneumoniae P1031]
 gi|301799771|emb|CBW32340.1| conserved hypothetical protein [Streptococcus pneumoniae OXC141]
 gi|306408894|gb|ADM84321.1| CBS domain protein [Streptococcus pneumoniae AP200]
 gi|332076033|gb|EGI86499.1| CBS domain pair family protein [Streptococcus pneumoniae GA41301]
 gi|332202618|gb|EGJ16687.1| CBS domain pair family protein [Streptococcus pneumoniae GA41317]
          Length = 218

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ IS+L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKISILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55


>gi|111017173|ref|YP_700145.1| IMP dehydrogenase [Rhodococcus jostii RHA1]
 gi|110816703|gb|ABG91987.1| probable IMP dehydrogenase [Rhodococcus jostii RHA1]
          Length = 142

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK- 278
           A  + + G ++  V    P+   I  L+    G + VV E   + GI+TE D+ R  H+ 
Sbjct: 4   ADVLRNKGPAVVTVDPEMPVSTLIGELARHNVGAL-VVTENDAVVGIVTERDVVRRIHER 62

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+    V D+M  +    L    +    + + +  I  L V+    + +GIV   D++
Sbjct: 63  GPDILNARVVDIMTTSVFTCLPTDTVDSLAETMTERRIRHLPVI-VDGQLVGIVSIGDVV 121

Query: 337 RFGI 340
           +  I
Sbjct: 122 KSRI 125


>gi|260584956|ref|ZP_05852700.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
           700633]
 gi|260157386|gb|EEW92458.1| acetoin utilization protein AcuB [Granulicatella elegans ATCC
           700633]
          Length = 213

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 57/126 (45%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +   ++  V+    ++ A+ ++ E     + VV EG KL G++T   + +N         
Sbjct: 6   YMSTNLITVEPTTTVMKALDLMKEHDVHRLPVV-EGDKLVGLLTAELVAQNSPSMATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN  + +D+M+K    +    +L  A  ++RQ  I VL V++     +GI+  
Sbjct: 65  VHELNYLLNKTTAKDIMLKQVITVKPTAVLEEAASIMRQQGIGVLPVLESRGNLVGIITD 124

Query: 333 LDLLRF 338
            D++  
Sbjct: 125 KDIMDA 130



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+D M  N   +   T +  A+ L+++H++  L VV +  K +G++ 
Sbjct: 3   VKDYMSTNLITVEPTTTVMKALDLMKEHDVHRLPVV-EGDKLVGLLT 48



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  VK    L +A +I+ ++  G + V++    L GIIT+ DI   F
Sbjct: 81  MLKQVITVKPTAVLEEAASIMRQQGIGVLPVLESRGNLVGIITDKDIMDAF 131


>gi|226311848|ref|YP_002771742.1| hypothetical protein BBR47_22610 [Brevibacillus brevis NBRC 100599]
 gi|226094796|dbj|BAH43238.1| conserved hypothetical protein [Brevibacillus brevis NBRC 100599]
          Length = 146

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS 284
               +  V +   + +    + +   G + VVDE + + G+IT+ DI  R   +     +
Sbjct: 13  MTKDVATVTLKDNVYEVACKMRDWNVGVIPVVDEKEDVIGVITDRDIVIRGLAEKHEGST 72

Query: 285 VEDV-MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +V M ++  +      +  A +++ QH I  L VV +  K +GIV   D+
Sbjct: 73  ATEVVMTRDIILGQPGMTVDEAARVMAQHQIRRLPVV-EHGKLVGIVALADM 123



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 30/61 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L   ++ ++M K+   +     +      +R  N+ V+ VVD+ +  IG++   D++  G
Sbjct: 4   LENRTLREIMTKDVATVTLKDNVYEVACKMRDWNVGVIPVVDEKEDVIGVITDRDIVIRG 63

Query: 340 I 340
           +
Sbjct: 64  L 64


>gi|212638309|ref|YP_002314829.1| acetoin utilization protein [Anoxybacillus flavithermus WK1]
 gi|212559789|gb|ACJ32844.1| Acetoin utilization protein (CBS, ACT domains) [Anoxybacillus
           flavithermus WK1]
          Length = 209

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLN----TLSV 285
           K    + DA+ I+ +K    + +VD+  ++ GI+T+ D+       FH + +       +
Sbjct: 10  KPSNTIADALNIVKQKNIRHLPIVDDEYRVVGIVTDRDLRDASPSIFHANEHLEDLQKPL 69

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M  N         +     L  +H IS + +V    K +GI+   DLL
Sbjct: 70  STIMKTNVITGHPLDFVEEVAALFYEHRISCMPIV-KENKLVGIITESDLL 119



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 25/48 (52%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +M  +   +     +  A+ +++Q NI  L +VDD  + +GIV   DL
Sbjct: 1   MMKTDVIALKPSNTIADALNIVKQKNIRHLPIVDDEYRVVGIVTDRDL 48


>gi|308234178|ref|ZP_07664915.1| transcriptional regulator, RpiR family protein [Atopobium vaginae
           DSM 15829]
 gi|328944434|ref|ZP_08241896.1| transcriptional regulator [Atopobium vaginae DSM 15829]
 gi|327491018|gb|EGF22795.1| transcriptional regulator [Atopobium vaginae DSM 15829]
          Length = 291

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 42/184 (22%), Positives = 72/184 (39%), Gaps = 8/184 (4%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +N T++  ++ I    + + SL  +L+         AVE ++A   R+++ G+G S    
Sbjct: 91  QNDTLESIIKKITL--KNIHSLYDALRLIDPETIEKAVELLQACD-RILLFGLGASLIAA 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                                         T  D+ IV+S+SG + E        +  + 
Sbjct: 148 KDANLKFLRVNKTCLINDDWHLQLITARNSTSQDVGIVISYSGQTAETLTCAEILKHNNT 207

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL---ES 196
           P+IAIT   +S ++  AD++L             A  +S I QL I D L  A       
Sbjct: 208 PIIAITRCIESPISKLADVLLYT--TSNESLFRSAAMSSRISQLNIIDILYTAFAVSDYE 265

Query: 197 RNFS 200
           +NF+
Sbjct: 266 KNFT 269


>gi|11497682|ref|NP_068903.1| hypothetical protein AF0062 [Archaeoglobus fulgidus DSM 4304]
 gi|2650583|gb|AAB91162.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 296

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 42/97 (43%), Gaps = 6/97 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
            + +  +     V V+ +  +L GI+T  DI R   ++   L    +M  NP  +  D  
Sbjct: 40  VLELFKKYEISAVPVL-KNSELVGIVTRKDILRKIEENQLAL----LMTPNPTTVDADAD 94

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +++L       L VV    K +GI+   D+++ 
Sbjct: 95  VKEVVKILTSTPFRRLPVV-KDGKLVGIITVRDIIKK 130



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 47/105 (44%), Gaps = 1/105 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     + + + IL+   F  + VV +  KL GIIT  DI +   +      V
Sbjct: 82  MTPNPTTVDADADVKEVVKILTSTPFRRLPVV-KDGKLVGIITVRDIIKKIAEMNIEKPV 140

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +  +      + E+T L V  +++R  N   + +++D  + +G++
Sbjct: 141 KSYITPYIVCVWEETPLNVVGEIMRLSNSEFVGILNDNDELVGVI 185



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +   D+M  N       +     ++L +++ IS + V+ + +  +GIV   D+LR 
Sbjct: 16  DAMKAADIMNSNVIYATLPSTRDKVLELFKKYEISAVPVLKNSE-LVGIVTRKDILRK 72



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 26/164 (15%), Positives = 54/164 (32%), Gaps = 38/164 (23%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K+  + +      +    I  V    PL     I+       V ++++  +L G+I E 
Sbjct: 129 KKIAEMNIEKPVKSYITPYIVCVWEETPLNVVGEIMRLSNSEFVGILNDNDELVGVIDEK 188

Query: 271 -DIFRNFHKD------------------------------------LNTLSVEDVMIKNP 293
             +     +D                                    L    V++ M K P
Sbjct: 189 IMLTETLIEDFIEQTAYSSSSDTDDSWSWDSVRDYTVKYFEVSVVKLPKEPVKNFM-KKP 247

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +   T ++   + + + ++  + V+D   + IG V   DL+R
Sbjct: 248 EFVYPQTSVSKCAKRMVRSDLDYIPVLDSENRLIGTVRDKDLIR 291



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 17/54 (31%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V +       V     +      +       + V+D   +L G + + D+ R  
Sbjct: 240 VKNFMKKPEFVYPQTSVSKCAKRMVRSDLDYIPVLDSENRLIGTVRDKDLIRVL 293


>gi|163760297|ref|ZP_02167380.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
 gi|162282696|gb|EDQ32984.1| hypothetical protein HPDFL43_08544 [Hoeflea phototrophica DFL-43]
          Length = 142

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 30/111 (27%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V       DA+  L++ + G V V   G K+ GI++E DI R       D  +  + D+M
Sbjct: 17  VSPSMGTADAVRFLADNKIGAVVVTGAGGKIAGILSERDIVRAIASRGADALSAPIYDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                   E   +   M+L+ +     L V +   K IGI+   D++R  I
Sbjct: 77  TSKVTTCGESHTVNQVMELMTKGRFRHLPV-EADGKLIGIISIGDVVRRRI 126



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 19/48 (39%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +        A++ L  + I  ++V     K  GI+   D++R 
Sbjct: 12  REVVTVSPSMGTADAVRFLADNKIGAVVVTGAGGKIAGILSERDIVRA 59


>gi|323703739|ref|ZP_08115379.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
 gi|323531327|gb|EGB21226.1| CBS domain containing protein [Desulfotomaculum nigrificans DSM
           574]
          Length = 210

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 57/126 (45%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------- 274
               S   +    P++DA+  +   +   + V  E  +L G++TE ++            
Sbjct: 6   CMTTSPITIPKTTPILDALEKMKRLKIRQLPVT-EKGRLIGLVTERELLTVTPSPATTLS 64

Query: 275 --NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ + V +VM+K+P  +  DT +  A  ++R++ ++ L+V+    + +GI+  
Sbjct: 65  IFEMNYLLSKMVVGEVMVKDPITVSPDTTMEEAALIMRENKVNCLLVM-QGDELVGILTQ 123

Query: 333 LDLLRF 338
            D+   
Sbjct: 124 TDIFDA 129



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M  +P  I + T +  A++ +++  I  L V +   + IG+V   +LL
Sbjct: 3   VKDCMTTSPITIPKTTPILDALEKMKRLKIRQLPVTEK-GRLIGLVTERELL 53



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 39/109 (35%), Gaps = 9/109 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +A  I+ E +  C+ V+ +G +L GI+T+ DIF  F +       
Sbjct: 81  MVKDPITVSPDTTMEEAALIMRENKVNCLLVM-QGDELVGILTQTDIFDAFIEFFGLKKA 139

Query: 286 EDVMIKNPKVILE--DTLLT--VAMQLLRQHNISVLMVVDDCQKAIGIV 330
                +      +    L      ++ +  + I   +V       + I+
Sbjct: 140 G---TRLVLQTQDRVGALAELTDIIRAMNIN-IRAFVVHRKDNDVVHII 184


>gi|254506453|ref|ZP_05118595.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus 16]
 gi|219550627|gb|EED27610.1| mannose-1-phosphate guanyltransferase [Vibrio parahaemolyticus 16]
          Length = 352

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVED 287
              ++     +  A+ I+  +      VV +  +L G++T+GDI R           V +
Sbjct: 5   KKAVLSPSQAIKTALEIIDSEALRVALVVADDNRLLGVVTDGDIRRGLLAGKGLDSPVSE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM  NP      +     ++L+ + +I  + ++DD  K  G+    
Sbjct: 65  VMNSNPITAKASSSREELIELMNKLDILFIPLIDD-GKLTGLETLH 109


>gi|207111248|ref|ZP_03245410.1| hypothetical protein HpylH_19473 [Helicobacter pylori
           HPKX_438_CA4C1]
          Length = 58

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/58 (44%), Positives = 43/58 (74%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           ++VI G+GKS  +  K+A+++ STG  S F+H  EA HGDLGM+ ++D+I+++S+ G 
Sbjct: 1   KLVIVGVGKSALVAQKIAASMLSTGNRSAFLHPTEAMHGDLGMVEKNDVILMISYGGE 58


>gi|270291549|ref|ZP_06197770.1| transcription regulator [Pediococcus acidilactici 7_4]
 gi|270280046|gb|EFA25883.1| transcription regulator [Pediococcus acidilactici 7_4]
          Length = 280

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 52/131 (39%), Gaps = 2/131 (1%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K+      V   GIG S  +   L       G P            +  M     +++++
Sbjct: 125 KLVDQADVVYTYGIGASHLVADDLQQKFGRLGKPVAQTQDVHLLAAE--MSKGRGVVVLI 182

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + E   +L  AR   +P++AIT    S +A  + +VL      E      A TTS
Sbjct: 183 SNSGETKETLQLLGAARALDLPVVAITRVLSSPLARQSTVVLAHSDSGEGNQLRSAATTS 242

Query: 179 AIMQLAIGDAL 189
            + QL + D L
Sbjct: 243 LMAQLYVVDLL 253


>gi|209524871|ref|ZP_03273417.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
 gi|209494750|gb|EDZ95059.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
          Length = 1380

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 60/145 (41%), Gaps = 37/145 (25%)

Query: 232 LVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGD 271
           +V     +++AI  +S  R  C                      +V +   + GI+T+ D
Sbjct: 15  VVSGDLTVMEAIACMSGVRLQCQMTDNISISESEPDLYSHLTCVIVLQDLMVVGILTQRD 74

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM---QLLRQHNISVLMVVDDCQKA 326
           I       ++L  L +++VM  +   + E  L T ++    LL++H I  L +VDD  + 
Sbjct: 75  IVGLAAQQQNLEELLIQEVMTPSVITVRESEL-TDSLTTINLLQKHRIRHLPIVDDSDRL 133

Query: 327 IGIVHFL----------DLLRFGII 341
           +G+V             DLLR  ++
Sbjct: 134 VGLVT-HESLRKLMRPIDLLRLRLV 157



 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/203 (16%), Positives = 77/203 (37%), Gaps = 25/203 (12%)

Query: 151 VVACHADIVLTLPKEPESCPHGLAPT--TSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            +AC + + L              P   +     + + D + + +L  R+          
Sbjct: 25  AIACMSGVRLQCQMTDNISISESEPDLYSHLTCVIVLQDLMVVGILTQRDI--------- 75

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCP-LIDAITILS---EKRFGCVAVVDEGQKLK 264
             G           ++    +  ++ +    L D++T ++   + R   + +VD+  +L 
Sbjct: 76  -VGLAAQQQNLEELLIQEVMTPSVITVRESELTDSLTTINLLQKHRIRHLPIVDDSDRLV 134

Query: 265 GIITEGDIFRNFHK-DLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G++T   + +     DL  L  V +VM +N      D  +    +L+ +  +S +++V+ 
Sbjct: 135 GLVTHESLRKLMRPIDLLRLRLVSEVMTRNVVSANCDQTMLEIARLMSERRVSCVVIVET 194

Query: 323 CQK-------AIGIVHFLDLLRF 338
                      +GI+   DL++F
Sbjct: 195 QGHGDHAMPIPVGILTERDLVQF 217



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 9/113 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQK-------LKGIITEGDIFR--NFHKDLNTLS 284
                +++   ++SE+R  CV +V+             GI+TE D+ +  +   +   + 
Sbjct: 169 NCDQTMLEIARLMSERRVSCVVIVETQGHGDHAMPIPVGILTERDLVQFQSLSLNWENIR 228

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E++M      I     L    QL+ Q  +  ++V     + +GIV    LL+
Sbjct: 229 AENMMSSPLFTIKPQENLWEVHQLMEQRRLGRVIVTGSRGELLGIVTQSSLLQ 281


>gi|308172200|ref|YP_003918905.1| 6-phospho-3-hexuloisomerase [Bacillus amyloliquefaciens DSM 7]
 gi|307605064|emb|CBI41435.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus amyloliquefaciens DSM
           7]
 gi|328552007|gb|AEB22499.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus amyloliquefaciens
           TA208]
 gi|328910272|gb|AEB61868.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus amyloliquefaciens LL3]
          Length = 185

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 35/177 (19%), Positives = 69/177 (38%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  +       +     E+I +   ++  +G G+SG +    A  +   G  ++ V 
Sbjct: 11  LNELSRTASLIADSEADKLAEQILSAD-QIFTSGAGRSGFMAKAFAMRMMHIGLNAYIVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +    L+I+ S SG +  L      A+  +  + A+T    S +   AD
Sbjct: 70  ETLTPP-----LQEGGLVIIGSGSGETKSLLHTAEKAKSLNGIITALTINPASSLGKLAD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           + +T+P  P+    G    + P  S   Q      DA+ + ++E +  +  D +  H
Sbjct: 125 LTITIPGSPKEETDGDRKTIQPMGSLFEQTLLLFYDAVILKIMEKKELNSADMFTKH 181


>gi|227828850|ref|YP_002830630.1| signal-transduction protein with CBS domains [Sulfolobus islandicus
           M.14.25]
 gi|238621042|ref|YP_002915868.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
 gi|227460646|gb|ACP39332.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.14.25]
 gi|238382112|gb|ACR43200.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus M.16.4]
          Length = 133

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKD 279
             + +      +     L +A+ ++ ++      V+D   G  + GI+T   I R+  K 
Sbjct: 4   KDVFNNTRPIKITRHTSLSEALELMDKQGIRFALVIDNSKGDDVIGIVTRSIILRSLAKG 63

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    V  VMIKN   I  +  L      + ++NI+ L+ +++  K IG+V   D+L  
Sbjct: 64  VSQNEPVSKVMIKNVITINGEEDLIDTFMFMMRNNITHLLAINETGKIIGVVSLRDVLTA 123


>gi|170290147|ref|YP_001736963.1| signal-transduction protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170174227|gb|ACB07280.1| putative signal-transduction protein with CBS domains [Candidatus
           Korarchaeum cryptofilum OPF8]
          Length = 180

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 4/103 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNP 293
           G  +  A+ ++  +R GC+ + DE  ++ GI TE D+ + F          V        
Sbjct: 66  GESVERAVELMRRERIGCLLLEDE-GEIVGIFTERDVVKGFLMGGGDYCDPVGKYATLKL 124

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I  +  L+ A +L+ ++ +  L +V    K IGI+   D++
Sbjct: 125 ITIDPNATLSEAARLMAENRVKRLPIV-QEGKVIGIITARDVV 166



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 52/106 (49%), Gaps = 3/106 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +V+     +DA + + + +     VV EG+++ G++T  DI R +    + + +      
Sbjct: 1   MVRPSDNYVDAASAMMKVK--SRLVVMEGEEIVGVVTAADITRAYASSKSKVPLRPYATW 58

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   I     +  A++L+R+  I  L+ ++D  + +GI    D+++
Sbjct: 59  SVVKIGIGESVERAVELMRRERIGCLL-LEDEGEIVGIFTERDVVK 103



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 20/93 (21%), Positives = 38/93 (40%), Gaps = 8/93 (8%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   +  G  +G    C     ++   +  +     L +A  +++E R   + +V 
Sbjct: 96  FTERD---VVKGFLMGGGDYCDPVGKYATLKLITIDPNATLSEAARLMAENRVKRLPIVQ 152

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           E  K+ GIIT  D+     + +   S   +M  
Sbjct: 153 E-GKVIGIITARDVV----EGIWRESTLGIMTP 180


>gi|42522490|ref|NP_967870.1| hypothetical protein Bd0921 [Bdellovibrio bacteriovorus HD100]
 gi|39575023|emb|CAE78864.1| conserved hypothetical protein [Bdellovibrio bacteriovorus HD100]
          Length = 352

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 50/122 (40%), Gaps = 6/122 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 ++K    +  A   ++    G V V D    L+G+ T+ D+           SV
Sbjct: 66  PLHKPIILKKDKSIRQAALAMNRNHVGSVIVSDGHGVLRGLFTDRDLALALALKNMETSV 125

Query: 286 --EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLDLLRFG 339
              ++   +   + E   L   + L++++ I  + VV    +  Q  +GI+   DL++ G
Sbjct: 126 PLGEITQHSLLYVNESATLENVIDLMKKYAIRRVPVVRSRPNGKQTCLGIITLDDLVKEG 185

Query: 340 II 341
           +I
Sbjct: 186 LI 187


>gi|46200944|ref|ZP_00056074.2| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 146

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVM 289
           V     + DA  +L++ + G V V+  G ++ GI++E DI R     ++   T  V D+M
Sbjct: 19  VTPDASIGDAARLLAQHKIGAVLVM-TGDRVAGILSERDIVRGLADAMDVCVTAKVRDLM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                V  ED  +   M+++    I  L V+D   +  G+V   D+++
Sbjct: 78  TAEVFVCHEDDTVERLMEIMTAKRIRHLPVMDSSGEVTGMVTIGDVVK 125



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D  +  A +LL QH I  ++V+    +  GI+   D++R
Sbjct: 17  VSVTPDASIGDAARLLAQHKIGAVLVMTGD-RVAGILSERDIVR 59


>gi|297154762|gb|ADI04474.1| putative CBS domain protein [Streptomyces bingchenggensis BCW-1]
          Length = 223

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 47/123 (38%), Gaps = 18/123 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTL---- 283
           V       + +  + + R   + V++   ++ G+++E D+      R+   D        
Sbjct: 19  VGRDASFKEMVRTMGQWRVSAMPVLEGEGRVVGVVSEADLLPKEEFRDSDPDRFEQLRRL 78

Query: 284 ---------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                    + E++M      +  +  L  A +++    +  L VVD   K  GIV   D
Sbjct: 79  PDLAKAGAVAAEELMSAPAVTVHAEATLAEAARIMAVRQVKRLPVVDSEGKLQGIVSRGD 138

Query: 335 LLR 337
           LL+
Sbjct: 139 LLK 141



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 25/53 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V DVM +    +  D      ++ + Q  +S + V++   + +G+V   DLL
Sbjct: 7   QVSDVMTRTVVAVGRDASFKEMVRTMGQWRVSAMPVLEGEGRVVGVVSEADLL 59



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 35/88 (39%), Gaps = 2/88 (2%)

Query: 193 LLESRNFSENDFYVLHPGGKL--GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           LL    F ++D        +L         +           V     L +A  I++ ++
Sbjct: 58  LLPKEEFRDSDPDRFEQLRRLPDLAKAGAVAAEELMSAPAVTVHAEATLAEAARIMAVRQ 117

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              + VVD   KL+GI++ GD+ + F +
Sbjct: 118 VKRLPVVDSEGKLQGIVSRGDLLKVFLR 145


>gi|209525724|ref|ZP_03274261.1| Chloride channel core [Arthrospira maxima CS-328]
 gi|209493893|gb|EDZ94211.1| Chloride channel core [Arthrospira maxima CS-328]
          Length = 890

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 48/101 (47%), Gaps = 3/101 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVI 296
            L    +  S+       VV+   KL GII++ D+ +   +D++    +  +M   P  I
Sbjct: 474 SLEQVRSAFSQSHHRGFPVVN-QGKLVGIISQTDMAKINQQDISEQTPLHKLMTPQPVTI 532

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D  L+  + LL +  +S L VV + +  +GI+   D++R
Sbjct: 533 YPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +    PL + + +L  ++   + VV EG+ L GIIT  DI R
Sbjct: 525 MTPQPVTIYPDAPLSEVLYLLGRQKLSRLPVV-EGRHLVGIITRSDIIR 572


>gi|242053745|ref|XP_002456018.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
 gi|241927993|gb|EES01138.1| hypothetical protein SORBIDRAFT_03g028940 [Sorghum bicolor]
          Length = 205

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 51/116 (43%), Gaps = 9/116 (7%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNF---HKDLNTLS 284
           +        + +A+  ++    G + V+  G   +L GI+TE D  R      +      
Sbjct: 71  VYWCSTSHSVHEAVQHMTAHNVGALVVLKSGNMNQLAGIVTERDFSRKILLPGRPSEETR 130

Query: 285 VEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VED+M +      +   T +  AM+++   +I  + V D+  K +G++   D++R 
Sbjct: 131 VEDIMTEEDKLITVSSHTNILRAMEVMTDKHIRHVPVFDE--KVVGMISIGDVVRA 184



 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 2/77 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF          +      D+M   D +  V     ++ A+ ++++K    V V DE
Sbjct: 111 TERDFSRKILLPGRPSEETRVEDIMTEEDKLITVSSHTNILRAMEVMTDKHIRHVPVFDE 170

Query: 260 GQKLKGIITEGDIFRNF 276
             K+ G+I+ GD+ R  
Sbjct: 171 --KVVGMISIGDVVRAI 185


>gi|322383894|ref|ZP_08057634.1| hypothetical protein PL1_3434 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321151609|gb|EFX44689.1| hypothetical protein PL1_3434 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 437

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 14/214 (6%)

Query: 126 ELKAILYYARRFSIPLIA-ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           EL A++ Y    S+ ++   T  +   +   A +++T           LA      +  +
Sbjct: 104 ELDAMVRYIEPGSLLIVGNRTGAHGLALKQGAGVLITGGFTTTDGIKELADEMGLPIISS 163

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D+  +A + +R   +           +    +   D++ S   +  +K      D   
Sbjct: 164 SYDSFTVASMINRAIYD---------RLIKKKIMLVEDIISSHTPVYSLKATSTPDDWKN 214

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +L +       VVDE  ++ G++T  D+           +V+ +M +NP  +   T +  
Sbjct: 215 LLEQTGHSRFPVVDEWNRVIGVVTSKDMVGA----DPDQAVDKLMTRNPLTVYPSTSIAS 270

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A   +    I +L VVD  +K + ++   D+L+ 
Sbjct: 271 AAHTMVWEAIELLPVVDSNRKMLAVISRNDVLKA 304


>gi|167756805|ref|ZP_02428932.1| hypothetical protein CLORAM_02354 [Clostridium ramosum DSM 1402]
 gi|167702980|gb|EDS17559.1| hypothetical protein CLORAM_02354 [Clostridium ramosum DSM 1402]
          Length = 324

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 13/180 (7%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  Q A R     +  +   E +L           +  +   + R+ + G G S   G
Sbjct: 125 TDSNSQIAYRIANLHQEAI---EDTLNLVDFKNLDKIINLLDQAR-RIYLFGNGNSLLAG 180

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMIT----RDDLIIVLSWSGSSDELKAILYYAR 135
                 +   G     +    A  G+ G ++     DD+ I++S+SG ++E+  +  + +
Sbjct: 181 FDFQHKMMRIG----KMVEMRAHAGEQGFLSYTCSPDDVAILISYSGETNEMVELAKFLK 236

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +  +PL+ ITS   + ++ +   ++      +     +AP +S      + D +   +  
Sbjct: 237 KMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFS-KIAPYSSKTSISYLLDLIFSCIFR 295


>gi|149912278|ref|ZP_01900851.1| CBS domain protein [Moritella sp. PE36]
 gi|149804648|gb|EDM64705.1| CBS domain protein [Moritella sp. PE36]
          Length = 614

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTL-S 284
                 + +   + DA   ++ K   C+ ++ E +   GI+T+ DI R    + LN+  S
Sbjct: 161 NSPAITISMQASIQDAAKYMTTKAVSCLIIMGETE-PTGIVTDKDIRRRCVAEGLNSQCS 219

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M  N   I        A+ L+    I  L V       +G++   DL+
Sbjct: 220 VTEIMTANMTTIDIKLCGHDALALMISQRIHHLPVT-KHGALVGMLTATDLM 270


>gi|52549159|gb|AAU83008.1| chloride channel [uncultured archaeon GZfos26B2]
          Length = 608

 Score = 76.5 bits (187), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 50/110 (45%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-- 290
           V     +   + ++++       V+D+  +L G++T  D  R    D   + V+ VM   
Sbjct: 495 VNPTNNVQTVLNLITKYGHIGYPVLDDN-RLVGVVTFKDAERVQAGDREEVLVDQVMTPA 553

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
            +  V   D  L  A++ L  ++I  L VV  DD  K +GIV   D++R 
Sbjct: 554 TSLIVTYPDESLEDALRKLVLNDIGRLPVVDRDDQSKILGIVTKSDIIRL 603



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQ 261
           F             V    VM    S+ +      L DA+  L     G + VV  D+  
Sbjct: 530 FKDAERVQAGDREEVLVDQVMTPATSLIVTYPDESLEDALRKLVLNDIGRLPVVDRDDQS 589

Query: 262 KLKGIITEGDIFR 274
           K+ GI+T+ DI R
Sbjct: 590 KILGIVTKSDIIR 602


>gi|262281760|ref|ZP_06059529.1| RpiR family transcriptional regulator [Streptococcus sp. 2_1_36FAA]
 gi|262262214|gb|EEY80911.1| RpiR family transcriptional regulator [Streptococcus sp. 2_1_36FAA]
          Length = 277

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 73  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 128

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 129 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRMNRVMLNPDCLVIGISISGETKIITQAIQ 188

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            A++     + +TS N   +    D ++ +  +          
Sbjct: 189 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNIS 231


>gi|167464080|ref|ZP_02329169.1| hypothetical protein Plarl_16234 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 445

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 83/214 (38%), Gaps = 14/214 (6%)

Query: 126 ELKAILYYARRFSIPLIA-ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           EL A++ Y    S+ ++   T  +   +   A +++T           LA      +  +
Sbjct: 112 ELDAMVRYIEPGSLLIVGNRTGAHGLALKQGAGVLITGGFTTTDGIKELADEMGLPIISS 171

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D+  +A + +R   +           +    +   D++ S   +  +K      D   
Sbjct: 172 SYDSFTVASMINRAIYD---------RLIKKKIMLVEDIISSHTPVYSLKATSTPDDWKN 222

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +L +       VVDE  ++ G++T  D+           +V+ +M +NP  +   T +  
Sbjct: 223 LLEQTGHSRFPVVDEWNRVIGVVTSKDMVGA----DPDQAVDKLMTRNPLTVYPSTSIAS 278

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A   +    I +L VVD  +K + ++   D+L+ 
Sbjct: 279 AAHTMVWEAIELLPVVDSNRKMLAVISRNDVLKA 312


>gi|113868009|ref|YP_726498.1| inosine 5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
 gi|113526785|emb|CAJ93130.1| Inosine-5'-monophosphate dehydrogenase [Ralstonia eutropha H16]
          Length = 487

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 7/168 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAI++ ++          L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAISMAQAGGIGIVH-KNLKPADQAREVARVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + D I +  +       V+ EG+ + GIIT  D+   F ++L    V   M   
Sbjct: 99  ISPDMKVRDVIALSQQHGISGFPVL-EGKAVVGIITNRDLR--FEEEL-DAPVRAKMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E   L  A +L+ +H +  ++VV+   +  G++   D+ + 
Sbjct: 155 EKLVTVAEGATLEEAKRLMNRHRLERVLVVNQAFELRGLITVKDIQKA 202



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 29/64 (45%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               M   + +  V  G  L +A  +++  R   V VV++  +L+G+IT  DI +     
Sbjct: 147 VRAKMTPREKLVTVAEGATLEEAKRLMNRHRLERVLVVNQAFELRGLITVKDIQKAVDNP 206

Query: 280 LNTL 283
           L + 
Sbjct: 207 LASK 210


>gi|78186871|ref|YP_374914.1| cyclic nucleotide-binding domain-containing protein [Chlorobium
           luteolum DSM 273]
 gi|78166773|gb|ABB23871.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Chlorobium
           luteolum DSM 273]
          Length = 649

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 48/142 (33%), Gaps = 9/142 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVM---HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           F +   G    +                ++        + +A  I++E   G + VV   
Sbjct: 151 FSLRRQGAPGPSCSSFLEHETLEVKPVVNVVTCPEDISVREAAVIMAECNIGSILVVSPE 210

Query: 261 QKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              +GIIT+ D+ +        +N   V D+M      I     +   + L+ +  +   
Sbjct: 211 GHPRGIITDTDLRKKVVAVSGPVNERPVRDIMSSPVYTITGGKTVADMVMLMVKTKLRHF 270

Query: 318 MVVDDC--QKAI-GIVHFLDLL 336
            +  D      + GI+   D++
Sbjct: 271 CITLDGTIDTPVRGIISEHDII 292



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           N     ED  +  A  ++ + NI  ++VV       GI+   DL R  ++
Sbjct: 179 NVVTCPEDISVREAAVIMAECNIGSILVVSPEGHPRGIITDTDL-RKKVV 227


>gi|194333860|ref|YP_002015720.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Prosthecochloris aestuarii DSM
           271]
 gi|194311678|gb|ACF46073.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Prosthecochloris aestuarii DSM
           271]
          Length = 660

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 6/118 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLN 281
               ++        + DA  I++E+  G + VV       GIIT+ D+ +        + 
Sbjct: 185 KPVSNVITCLPDISIQDAACIMAERNIGSIIVVSSENHPLGIITDTDLRKKVVAMPGSVK 244

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDD--CQKAIGIVHFLDLL 336
              V  +M      I     +   + L+ +  +    V VD        GI+   D++
Sbjct: 245 EKPVSHIMSSPVYTISPGKTIADMVILMVKTKLRHFCVTVDGSPDSPVTGIISEHDII 302



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           N    L D  +  A  ++ + NI  ++VV      +GI+   DL R  ++
Sbjct: 189 NVITCLPDISIQDAACIMAERNIGSIIVVSSENHPLGIITDTDL-RKKVV 237


>gi|317485668|ref|ZP_07944539.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
 gi|316923033|gb|EFV44248.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
          Length = 201

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 59/167 (35%), Gaps = 24/167 (14%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R+F E   +            + A D+MH       V     + D +  L + R     V
Sbjct: 36  RDFQEIYAHAYKIARGRLLSSITAGDIMHVPVLC--VAEEQSVRDLVIFLDDHRISGAPV 93

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLN---------------------TLSVEDVMIKNPKV 295
           V    +L G+++E D+ R                               V  +M +    
Sbjct: 94  VGAEGRLSGVVSESDVVRFVGGGETVTVMHLMHTLMRQGCVSGADLEAPVGSIMTRECVS 153

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF-GII 341
           + E   L   ++LLR   I+ + VVD   + +GIV   D++   G++
Sbjct: 154 VGEGAHLGDMLELLRTRRINRIPVVDAGMRPVGIVSRTDIINAFGVM 200


>gi|73669501|ref|YP_305516.1| hypothetical protein Mbar_A2002 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396663|gb|AAZ70936.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 154

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 56/145 (38%), Gaps = 35/145 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              ++   K    + +   IL E       V+ EG++L GII+E D+ +           
Sbjct: 7   MNPNVVFCKPDDTVRETARILKENNVSGAPVL-EGEELVGIISEADLLKLLILPEKGELW 65

Query: 275 ----------------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                                     D+ +  +E++MI+N   I  +  +  A + + +H
Sbjct: 66  LPSPFEVIEVPIRELLGWEETKKMLSDVGSTKIEEIMIRNVHTISSEASIEEASEHMIRH 125

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I+ L V  +  + +GI+   D+++
Sbjct: 126 RINRLPVT-EDNRVVGIITRGDIIK 149



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+DVM  N      D  +    ++L+++N+S   V+ + ++ +GI+   DLL+ 
Sbjct: 1   MKVKDVMNPNVVFCKPDDTVRETARILKENNVSGAPVL-EGEELVGIISEADLLKL 55



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/72 (18%), Positives = 25/72 (34%), Gaps = 1/72 (1%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                K+ +             ++  +     + +A   +   R   + V  E  ++ GI
Sbjct: 83  WEETKKMLSDVGSTKIEEIMIRNVHTISSEASIEEASEHMIRHRINRLPVT-EDNRVVGI 141

Query: 267 ITEGDIFRNFHK 278
           IT GDI +   K
Sbjct: 142 ITRGDIIKGLAK 153


>gi|324998234|ref|ZP_08119346.1| hypothetical protein PseP1_05678 [Pseudonocardia sp. P1]
          Length = 147

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 6/95 (6%)

Query: 251 FGCVAVVDEG--QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVA 305
            G + V D+G  +++ GI++E DI R    D   ++ L+V DVM ++      D  +   
Sbjct: 36  IGALVVSDDGFRERVDGIVSERDIVRRLASDGGAVSRLTVADVMTRHVITCRPDDPIAEV 95

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M  + +     L VV +  K  G++   D+++  +
Sbjct: 96  MAQMNRWRHRHLPVV-EDGKLCGMISIGDVVKQRL 129



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 5/65 (7%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG +  L V      H    +   +   P+ + +  ++  R   + VV E  KL G+I+ 
Sbjct: 67  GGAVSRLTVADVMTRH----VITCRPDDPIAEVMAQMNRWRHRHLPVV-EDGKLCGMISI 121

Query: 270 GDIFR 274
           GD+ +
Sbjct: 122 GDVVK 126


>gi|153835335|ref|ZP_01988002.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
 gi|156974174|ref|YP_001445081.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
 gi|148868149|gb|EDL67306.1| cyclic nucleotide binding domain protein [Vibrio harveyi HY01]
 gi|156525768|gb|ABU70854.1| hypothetical protein VIBHAR_01888 [Vibrio harveyi ATCC BAA-1116]
          Length = 629

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 54/123 (43%), Gaps = 12/123 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEGDI-FRNF 276
               P ++ G  + +A  ++++     + +VD    L          GIIT+ D+  R  
Sbjct: 157 TREAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVVGIITDRDLCTRVL 216

Query: 277 HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + L+ L  V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D+
Sbjct: 217 AEGLSPLDEVSTVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVV-KEQMPIGIIEATDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278



 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---------QKAI 327
             DL T  V+ ++ +    I     +  A QL+ Q N+S L++VD              +
Sbjct: 144 ANDLTTSKVKTLLTREAPTIERGQTIQEAAQLMAQDNVSSLLIVDPDFVLDEEDPQSPVV 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|187924745|ref|YP_001896387.1| hypothetical protein Bphyt_2769 [Burkholderia phytofirmans PsJN]
 gi|187715939|gb|ACD17163.1| CBS domain containing protein [Burkholderia phytofirmans PsJN]
          Length = 153

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I     K+   + T ++  VM
Sbjct: 17  VTPDTTLHDAVNAMAEHDIGSL-VVMEYGDLVGMLTFREIMLTLSKNGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVL-ESRTLMGVISFYDVAKA 123



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTTLHDAVNAMAEHDIGSLVVM-EYGDLVGMLTFREIM 56


>gi|18313644|ref|NP_560311.1| hypothetical protein PAE2864 [Pyrobaculum aerophilum str. IM2]
 gi|18161192|gb|AAL64493.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 129

 Score = 76.1 bits (186), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 57/116 (49%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-KDLNT 282
           +   +  V    PL  A+ ++++   G + +VD+    ++ G+++E DI R+   K   T
Sbjct: 7   ASRPVITVTPDTPLEKAVELMADHDVGILVLVDKENPKRVVGVLSERDIVRSLAGKAPLT 66

Query: 283 LSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + VE +   +    +  D  + VA + + ++ I  ++VVD      G++   D+L+
Sbjct: 67  VLVEKLATTHSIIYVYADDPIEVAAEKMMKYGIRHVVVVDKEGGLHGVISIRDVLK 122



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLR 337
           +   ++  +    +  DT L  A++L+  H++ +L++VD     + +G++   D++R
Sbjct: 1   MKCGEIASRPVITVTPDTPLEKAVELMADHDVGILVLVDKENPKRVVGVLSERDIVR 57



 Score = 36.8 bits (84), Expect = 5.1,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  SI  V    P+  A   + +     V VVD+   L G+I+  D+ +   
Sbjct: 74  TTHSIIYVYADDPIEVAAEKMMKYGIRHVVVVDKEGGLHGVISIRDVLKRIG 125


>gi|307104771|gb|EFN53023.1| hypothetical protein CHLNCDRAFT_59753 [Chlorella variabilis]
          Length = 209

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 9/120 (7%)

Query: 219 CASDVMHSGDSIPLV--KIGCPLIDAITILSEKR-FGCVAVVDEGQKLKGIITEGDIFRN 275
             +  +H      LV    G  L +   +L        + VVD   KL G+++  D+ + 
Sbjct: 74  TRNTRLHDVMQTNLVVTSPGASLAEVTALLDGPPSIEGMPVVDGDNKLVGVVSRKDLAK- 132

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+D+M   P  +     +  A +++ +H    + VVDD    +GIV   D+
Sbjct: 133 -----GGALVQDIMSSTPVSLKASGKVADAAEIMIKHKFHRVPVVDDDNTCVGIVTRSDI 187



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 1/60 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLR-QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
               + DVM  N  V      L     LL    +I  + VVD   K +G+V   DL + G
Sbjct: 75  RNTRLHDVMQTNLVVTSPGASLAEVTALLDGPPSIEGMPVVDGDNKLVGVVSRKDLAKGG 134


>gi|304314968|ref|YP_003850115.1| metalloprotease [Methanothermobacter marburgensis str. Marburg]
 gi|302588427|gb|ADL58802.1| predicted metalloprotease [Methanothermobacter marburgensis str.
           Marburg]
          Length = 338

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 6/112 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  ++    + +A+ ++  K+     V D G +L GI+T  DI          + V
Sbjct: 223 MTPDPVTLRPDMTVGEALDVMFRKKHMGYPVTD-GDELAGIVTFHDISEA----ARDVMV 277

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM        ED  LT  ++ + +H +  L V+    K  GI+   D++R
Sbjct: 278 GDVMTAEVVTAAEDEELTSVLEKMNRHQLGRLPVM-GDGKLKGIISRTDIIR 328



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  ++V DVM  +P  +  D  +  A+ ++ +       V D  +   GIV F D+   
Sbjct: 214 LEGVTVGDVMTPDPVTLRPDMTVGEALDVMFRKKHMGYPVTDGDE-LAGIVTFHDISEA 271


>gi|329764992|ref|ZP_08256579.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
 gi|329138529|gb|EGG42778.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
          Length = 514

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 42/110 (38%), Gaps = 3/110 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
            +    + ++       DA  +L       + V DE     GI+T+ DI R       + 
Sbjct: 19  TYMHKEVLMLNQNTRTRDAARLLQHYETDDIIVTDENNIPVGIVTDEDIIRKVSDVTVNA 78

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               ++D+M      I E   L  A+  +R  N+  L VV      IGI+
Sbjct: 79  EFTFLKDIMNTPLITINEKASLQDALHKMRDSNVRKLPVVSKKNLVIGII 128



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V   M K   ++ ++T    A +LL+ +    ++V D+    +GIV   D++R 
Sbjct: 17  VTTYMHKEVLMLNQNTRTRDAARLLQHYETDDIIVTDENNIPVGIVTDEDIIRK 70


>gi|237734522|ref|ZP_04565003.1| sugar isomerase [Mollicutes bacterium D7]
 gi|229382342|gb|EEO32433.1| sugar isomerase [Coprobacillus sp. D7]
          Length = 291

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 13/180 (7%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  Q A R     +  +   E +L           +  +   + R+ + G G S   G
Sbjct: 92  TDSNSQIAYRIANLHQEAI---EDTLNLVDFKNLDKIINLLDQAR-RIYLFGNGNSLLAG 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMIT----RDDLIIVLSWSGSSDELKAILYYAR 135
                 +   G     +    A  G+ G ++     DD+ I++S+SG ++E+  +  + +
Sbjct: 148 FDFQHKMMRIG----KMVEMRAHAGEQGFLSYTCSPDDVAILISYSGETNEMVELAKFLK 203

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +  +PL+ ITS   + ++ +   ++      +     +AP +S      + D +   +  
Sbjct: 204 KMHVPLLGITSIGDNQLSKYCTYIMNTGSREKIFS-KIAPYSSKTSISYLLDLIFSCIFR 262


>gi|73670583|ref|YP_306598.1| hexulose-6-phosphate isomerase [Methanosarcina barkeri str. Fusaro]
 gi|72397745|gb|AAZ72018.1| 3-hexulose-6-phosphate isomerase [Methanosarcina barkeri str.
           Fusaro]
          Length = 204

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 54/131 (41%), Gaps = 6/131 (4%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L   +           ++KI   + R+ + G G+SG +    A  L   G   + V   
Sbjct: 22  NLSEIIDKLDREAIKLMIQKILEGE-RIFLMGAGRSGLVAKAFAMRLMHLGFSVYVVGET 80

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    +  +D++I +S SG +  +  +    +     LI +TS+ +S +   +D+ 
Sbjct: 81  TTP-----AVRPEDIVIAISGSGETHSIADLGKIVKDIGSTLITVTSKKESTLGRISDVT 135

Query: 160 LTLPKEPESCP 170
           + LP + ++  
Sbjct: 136 MILPSKTKNDS 146


>gi|23016602|ref|ZP_00056356.1| COG0517: FOG: CBS domain [Magnetospirillum magnetotacticum MS-1]
          Length = 143

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 46/105 (43%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           ++    + DA  +L+ K+ G   V D   KL+G+++E DI +      K    + V +VM
Sbjct: 17  IRPEHSVADAAALLTNKKVGVAVVCDAKGKLQGVLSERDIVKGLAQYGKAALEMPVRNVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                       +   M ++ +  I  L V++  +  IGIV   D
Sbjct: 77  SSPVVTCTPGDSVKTIMGVMTERRIRHLPVLEKDE-LIGIVSIGD 120



 Score = 42.6 bits (99), Expect = 0.092,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 19/43 (44%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  +  +  A  LL    + V +V D   K  G++   D+++
Sbjct: 16  TIRPEHSVADAAALLTNKKVGVAVVCDAKGKLQGVLSERDIVK 58


>gi|73669329|ref|YP_305344.1| putative chloride channel [Methanosarcina barkeri str. Fusaro]
 gi|72396491|gb|AAZ70764.1| putative chloride channel [Methanosarcina barkeri str. Fusaro]
          Length = 593

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/200 (15%), Positives = 66/200 (33%), Gaps = 4/200 (2%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ + +            +L L +        L    + ++   + +AL    + +    
Sbjct: 379 MVGMGAVFAGTARAPLTAILILFEITRDYNMILPLMFACVLSNVMSNALYPESIFTEGLR 438

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F +   G ++  +             +  V     +    T++   R     V+D  
Sbjct: 439 RKGFKI-RKGREVDIMSSMLVKDAMITY-VQTVSEDKSVEALTTLMQVSRHVGFPVLDSK 496

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            KL GI+T  D+            V+D+  +  +V   D  L   ++      I  L VV
Sbjct: 497 GKLSGIVTLSDLRSKVKSGDVDKKVKDIATQRLEVAYPDETLDAVLKRFASKQIGRLPVV 556

Query: 321 DDCQK--AIGIVHFLDLLRF 338
           D   K   +G++   D++  
Sbjct: 557 DREDKTRLLGLITRSDIVNA 576


>gi|319946507|ref|ZP_08020743.1| CBS domain protein [Streptococcus australis ATCC 700641]
 gi|319747338|gb|EFV99595.1| CBS domain protein [Streptococcus australis ATCC 700641]
          Length = 220

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 16  ISPDTTIAHAADLMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIFEMNYLL 74

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVM+++   + +   L  A  L+ ++ + +L VVD+ Q   G++   D+ R 
Sbjct: 75  NKTKVKDVMLRDVITVSKFASLEDATYLMYKNKVGILPVVDNEQ-VSGVITDRDIFRA 131



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++  K +G+V 
Sbjct: 3   MAVKDFMTRKVVYISPDTTIAHAADLMREQGLHRLPVIEND-KLVGLVT 50



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L DA  ++ + + G + VVD  +++ G+IT+ DIFR F
Sbjct: 90  VSKFASLEDATYLMYKNKVGILPVVD-NEQVSGVITDRDIFRAF 132


>gi|238762473|ref|ZP_04623444.1| RpiR family regulatory protein [Yersinia kristensenii ATCC 33638]
 gi|238699458|gb|EEP92204.1| RpiR family regulatory protein [Yersinia kristensenii ATCC 33638]
          Length = 286

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/183 (24%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   V  I A + RV I GI  
Sbjct: 87  ALHNSISSEDSLMVMAQKLAHEKTASIMETTRKINFSVFQQVVSLINAAQ-RVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IVLS++G   ++K     A
Sbjct: 146 SGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMKIAATVA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESISDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESR 197
           + R
Sbjct: 264 QQR 266


>gi|299822763|ref|ZP_07054649.1| CBS domain protein [Listeria grayi DSM 20601]
 gi|299816292|gb|EFI83530.1| CBS domain protein [Listeria grayi DSM 20601]
          Length = 433

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 4/88 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                 VV++  +L G+IT  DI     K++ T S+E VM KNP  + E   +  A  ++
Sbjct: 221 GHSRFPVVNKAMRLVGMITSKDI---LDKNM-TASIERVMTKNPLTVGEKMSVASAAHMM 276

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               I V+ VV D    +GIV   D+L+
Sbjct: 277 IWEGIEVIPVVKDDLTLVGIVSRQDILK 304


>gi|300781343|ref|ZP_07091197.1| signal-transduction protein [Corynebacterium genitalium ATCC 33030]
 gi|300533050|gb|EFK54111.1| signal-transduction protein [Corynebacterium genitalium ATCC 33030]
          Length = 616

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 6/128 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G   TL +  SD++  G+ +   +    +      + E     + +   G    GI+T+ 
Sbjct: 144 GNSDTLRMTVSDMIRMGNLVT-ARFDESIRATAEKMVEANVSSIVIC--GGAETGILTDR 200

Query: 271 DIF-RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   K L+T + V +VM    + I  DT L  AM +L +  I  L V  D Q  +G
Sbjct: 201 DLRKRVVAKGLDTSVQVAEVMTAPVRTIAPDTKLFEAMLILSELGIHHLPVTQDDQ-IVG 259

Query: 329 IVHFLDLL 336
           ++   D++
Sbjct: 260 VLTSSDIM 267



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 2/73 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +  +     L +A+ ILSE     + V  +  ++ G++T  DI      D
Sbjct: 215 VQVAEVMTAPVRTIAPDTKLFEAMLILSELGIHHLPVTQDD-QIVGVLTSSDIMHQLQSD 273

Query: 280 LNTLSVEDVMIKN 292
              L   DV   N
Sbjct: 274 PIYL-AADVAGSN 285


>gi|281412975|ref|YP_003347054.1| RpiR family transcriptional regulator [Thermotoga naphthophila
           RKU-10]
 gi|281374078|gb|ADA67640.1| transcriptional regulator, RpiR family [Thermotoga naphthophila
           RKU-10]
          Length = 266

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  E   L  L+ +L  +       AVE I +   R++  G+G SG +    +   +  G
Sbjct: 87  IDEEIDILRRLKDTLDMK---NVEKAVEWILSAH-RILFFGVGLSGMVSEYASLKFSLLG 142

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +FF +       +   +T +DL+I +S +G+  +       A+      IAIT+  +S
Sbjct: 143 FHTFFSNDPHVQVIEAVNLTGEDLVISISHTGNIRDTVKSTQVAKDMGAKTIAITTNRQS 202

Query: 151 VVACHADIVLTLP 163
            +A    +VL  P
Sbjct: 203 ELAKVVHLVLQSP 215


>gi|332525643|ref|ZP_08401797.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Rubrivivax benzoatilyticus JA2]
 gi|332109207|gb|EGJ10130.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Rubrivivax benzoatilyticus JA2]
          Length = 636

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 73/179 (40%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +++ ++  ++ +      +  +   L  +       A++ + A + RV    +G  G + 
Sbjct: 417 EDTMLELGVKVLGNTASAILQVRDQLNRD---AIDRAIDLLTAAE-RVEFFAVGHYGVVA 472

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G PS  V           ++   D+ +++S SG  ++L A+   A     
Sbjct: 473 DDAQLKFLRFGVPSMAVTEHRLQVLTANVMRPTDVAVIISSSGQVEDLLAVADKAHERGT 532

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           P++AIT+  +S +A  AD+ +    +    P    P  S I+ L + D LA+ +   R 
Sbjct: 533 PVLAITAS-QSPLAKKADVAII--VDHLEDPSTHVPMISRILHLLVIDILAVGVAMRRG 588


>gi|302382008|ref|YP_003817831.1| signal transduction protein with CBS domains [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302192636|gb|ADL00208.1| putative signal transduction protein with CBS domains
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 137

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               + + +   P+ +    +    FG + V D G  L G IT+ DI  R   +    + 
Sbjct: 7   MSRDVQVARPADPIQEVAARMGAGDFGFLPVSD-GTALVGTITDRDIAVRGLGQGKPGSA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM      +L+   L  A+ L+    I  L V+D     +G+V   DL
Sbjct: 66  PVSEVMTSTVTTVLDSDDLKSALDLMASARIRRLPVLDRHGNLVGVVSLGDL 117


>gi|289641935|ref|ZP_06474090.1| putative signal transduction protein with CBS domains [Frankia
           symbiont of Datisca glomerata]
 gi|289508235|gb|EFD29179.1| putative signal transduction protein with CBS domains [Frankia
           symbiont of Datisca glomerata]
          Length = 267

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 3/120 (2%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH 277
            A+ +  +      V+    + +A   +     G + V D+   L GI+T+ DI  R   
Sbjct: 1   MANVLSVTSVPPVTVRRYRTIGEAAHEMDLHGVGALLVTDDRDHLVGIVTDRDIVLRGVA 60

Query: 278 KDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +    SV+ +M      +  D  L  A ++ R H +  L V+D   + +G++   DLL
Sbjct: 61  RGVPMETSVDRLMTTEVFTLPVDAELDRAYEVFRDHALRRLPVLDGD-RIVGVLSIDDLL 119



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 23/56 (41%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  V    P  +     +  A   +  H +  L+V DD    +GIV   D++  G+
Sbjct: 4   VLSVTSVPPVTVRRYRTIGEAAHEMDLHGVGALLVTDDRDHLVGIVTDRDIVLRGV 59


>gi|288819095|ref|YP_003433443.1| putative chloride channel [Hydrogenobacter thermophilus TK-6]
 gi|288788495|dbj|BAI70242.1| putative chloride channel [Hydrogenobacter thermophilus TK-6]
 gi|308752678|gb|ADO46161.1| Cl- channel voltage-gated family protein [Hydrogenobacter
           thermophilus TK-6]
          Length = 568

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 3/128 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G   +    V         +K    + +A  ++++   G + VV++  KL GIIT+ D+
Sbjct: 436 WGLYIIERLRVKDHMSEPITIKPYVHIEEAQDLMAQNLIGGLPVVND-GKLVGIITKSDV 494

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIV 330
            +   +  ++  V +VM  N  V   +  L    +L+    +  + +V+     K +GI+
Sbjct: 495 LKVPPEKRSSTKVYEVMSTNLIVATPEDTLGYVFRLMMGKGVGRIPIVEKKGSLKLVGII 554

Query: 331 HFLDLLRF 338
              D+ R 
Sbjct: 555 ARADIGRA 562


>gi|254467169|ref|ZP_05080580.1| CBS domain protein [Rhodobacterales bacterium Y4I]
 gi|206688077|gb|EDZ48559.1| CBS domain protein [Rhodobacterales bacterium Y4I]
          Length = 144

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           VK    + DA  +L+E +FG V V  +G    GI++E DI R   K+        V   M
Sbjct: 18  VKPDASVSDAARLLAENKFGSVVVSADGVTPDGILSERDIVRELSKEGAACLDKPVSGYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +        + +   ++ + +     + VV +  K +GIV   D ++ 
Sbjct: 78  TRELVTCTTQSNVGELLKQMTEGRFRHMPVV-EDGKLVGIVTLGDAVKA 125



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 21/50 (42%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +  D  ++ A +LL ++    ++V  D     GI+   D++R 
Sbjct: 11  ATTGVVTVKPDASVSDAARLLAENKFGSVVVSADGVTPDGILSERDIVRE 60


>gi|21227404|ref|NP_633326.1| hypothetical protein MM_1302 [Methanosarcina mazei Go1]
 gi|20905768|gb|AAM30998.1| conserved protein [Methanosarcina mazei Go1]
          Length = 264

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLN-TLS 284
              P +     L+ A  ++ + +   V VV     + + GI+++ DI RN     N + +
Sbjct: 70  RQSPTITPDMDLVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILRNVELPRNISKT 129

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +E +M K  K    D  ++     + + + + + VV      IG++   D+++ G
Sbjct: 130 IEAIMTKKVKTCSPDERVSKVWNYMIETDYTGIPVVSKKGDPIGMITRRDIIKSG 184



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K G  +  A  ++ +  F  + VVDEG +L G++ + DI  N     + ++V     ++
Sbjct: 14  IKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIM-NVTSTRSNVTVSGYARQS 72

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLR 337
           P  I  D  L  A +L+ Q   + + VV     +  +GI+  +D+LR
Sbjct: 73  P-TITPDMDLVKAAKLMVQSKQNRVPVVKSTTDRTVVGILSDVDILR 118



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 31/52 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M + P  I E   +T A QL+R +    ++VVD+  + +G+++  D++
Sbjct: 3   VSEIMTEEPVSIKEGDFVTHARQLMRDYFFRGIVVVDEGNRLVGMLNDQDIM 54



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 11/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +        +      + E  +  + VV +     G+IT  DI ++          
Sbjct: 134 MTKKVKTCSPDERVSKVWNYMIETDYTGIPVVSKKGDPIGMITRRDIIKSGALRMAIEDE 193

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +   +  VE +M      + E+  +  A+ ++ Q +I  + VV++  K  GI    D
Sbjct: 194 RATRPNESPKVEKIMSTPAYTLSENDSIKSAIDIIVQRDIGRITVVNEQGKISGIADRQD 253

Query: 335 LL 336
           LL
Sbjct: 254 LL 255


>gi|15643984|ref|NP_229033.1| RpiR family transcriptional regulator [Thermotoga maritima MSB8]
 gi|170289371|ref|YP_001739609.1| RpiR family transcriptional regulator [Thermotoga sp. RQ2]
 gi|4981782|gb|AAD36303.1|AE001779_5 transcriptional regulator, RpiR family [Thermotoga maritima MSB8]
 gi|170176874|gb|ACB09926.1| transcriptional regulator, RpiR family [Thermotoga sp. RQ2]
          Length = 266

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 58/133 (43%), Gaps = 4/133 (3%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           I  E   L  L+ +L  +       AVE I +   R++  G+G SG +    +   +  G
Sbjct: 87  IDEEIDILRRLKDTLDMK---NVEKAVEWILSAH-RILFFGVGLSGVVSEYASLKFSLLG 142

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +FF +       +   +T +DL+I +S +G+  +       A+      IAIT+  +S
Sbjct: 143 FHTFFSNDPHVQVIEAVNLTGEDLVISISHTGNIRDTVKSTQVAKDMGAKTIAITTNRQS 202

Query: 151 VVACHADIVLTLP 163
            +A    +VL  P
Sbjct: 203 ELAKVVHLVLQSP 215


>gi|298675800|ref|YP_003727550.1| Cl- channel voltage-gated family protein [Methanohalobium
           evestigatum Z-7303]
 gi|298288788|gb|ADI74754.1| Cl- channel voltage-gated family protein [Methanohalobium
           evestigatum Z-7303]
          Length = 579

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 4/198 (2%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ + S     +      +L L +        L    + ++  AI +AL +  L +    
Sbjct: 367 MVGMGSVFAGTLHAPLTGMLILFELTRDYQLILPLMFACVISNAIANALHLESLYTEGLR 426

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                +           +   D M        V     +   I ++   + G   V+D  
Sbjct: 427 RRGLKIWGGQQVDVMKSMLVEDAMVKDVQS--VLENNTVGTLIHMMQSSKHGGFPVLDLN 484

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +KL+GI+T  D+            + ++M KN  V   D  L   +  L + +I  L VV
Sbjct: 485 RKLRGIVTLQDLREKVKYGEVNQRISEIMYKNVAVAYPDETLDTVLNRLAKLDIGRLPVV 544

Query: 321 --DDCQKAIGIVHFLDLL 336
             DD  + +G++   D++
Sbjct: 545 SRDDETELLGLITRSDII 562


>gi|110834712|ref|YP_693571.1| inosine-5'-phosphate dehydrogenase [Alcanivorax borkumensis SK2]
 gi|110647823|emb|CAL17299.1| inosine-5'-phosphate dehydrogenase [Alcanivorax borkumensis SK2]
          Length = 493

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 58/175 (33%), Gaps = 17/175 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAI + +          +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTEHRLAITMAQEGGVG-----ILHKSMDIEDQARNVRMVKKYESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
               V     + + I I        V VV++     K+ GI+T  D     + D     V
Sbjct: 96  DPITVTPDTTVAELIRITEANNISGVPVVEKKGNGDKVVGIVTSRDTRFITNYD---QCV 152

Query: 286 EDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M        +LE         LL +H I  ++VV++     G++   D+ + 
Sbjct: 153 KDIMTGKDRLVTVLEGAGADEVQALLHKHRIEKIIVVNEAGDLRGMITVKDIEKA 207


>gi|29654639|ref|NP_820331.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 493]
 gi|161829973|ref|YP_001597187.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 331]
 gi|212212278|ref|YP_002303214.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuG_Q212]
 gi|29541907|gb|AAO90845.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 493]
 gi|161761840|gb|ABX77482.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 331]
 gi|212010688|gb|ACJ18069.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuG_Q212]
          Length = 489

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 64/171 (37%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL E+         +LH              V         
Sbjct: 40  NIPLLSAAMDTVTEARLAIALAEAGGIG-----ILHKNMSPTYQANEVRKVKKFESGVVF 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I SE     + VV EG++L GIIT  DI   F  D+    V ++
Sbjct: 95  DPITVSPESTIGELKKITSEYNISGLPVV-EGEQLIGIITSRDIR--FETDM-QQKVVNL 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        I E       + L RQH +  L+V++D  +  G++   D+LR
Sbjct: 151 MTPKDRLITIKEGASRDEIINLFRQHRVEKLLVINDRFELRGLITVKDILR 201


>gi|153208947|ref|ZP_01947160.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154707175|ref|YP_001424778.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii Dugway
           5J108-111]
 gi|165924006|ref|ZP_02219838.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 334]
 gi|212218752|ref|YP_002305539.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuK_Q154]
 gi|120575605|gb|EAX32229.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii 'MSU Goat
           Q177']
 gi|154356461|gb|ABS77923.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii Dugway
           5J108-111]
 gi|165916551|gb|EDR35155.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii RSA 334]
 gi|212013014|gb|ACJ20394.1| inosine-5'-monophosphate dehydrogenase [Coxiella burnetii
           CbuK_Q154]
          Length = 489

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 45/171 (26%), Positives = 64/171 (37%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL E+         +LH              V         
Sbjct: 40  NIPLLSAAMDTVTEARLAIALAEAGGIG-----ILHKNMSPTYQANEVRKVKKFESGVVF 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I SE     + VV EG++L GIIT  DI   F  D+    V ++
Sbjct: 95  DPITVSPESTIGELKKITSEYNISGLPVV-EGEQLIGIITSRDIR--FETDM-QQKVVNL 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        I E       + L RQH +  L+V++D  +  G++   D+LR
Sbjct: 151 MTPKDRLITIKEGASRDEIINLFRQHRVEKLLVINDRFELRGLITVKDILR 201


>gi|298705826|emb|CBJ34183.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 196

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 17/90 (18%), Positives = 40/90 (44%), Gaps = 3/90 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLL 302
           +++ R     ++D    L+GII++ D+ R       D ++ +V +VM  +P ++      
Sbjct: 1   MADVRTDAAILLDNKGHLEGIISDQDVARRVVANRLDPSSTTVSEVMTPHPTIVHMADSA 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              + ++ +     L V+D      G++  
Sbjct: 61  MECLGIMIEKRFRHLPVIDGEGNVTGLLSI 90


>gi|291482544|dbj|BAI83619.1| hypothetical protein BSNT_00322 [Bacillus subtilis subsp. natto
           BEST195]
          Length = 291

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 2/161 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + +++ +       +   AV  +      V   G+G SG +              
Sbjct: 100 TAGNAIQAIQDTSDLMDYKELERAVSLLLKAHT-VHFIGLGASGIVAKDAQQKWLRIHKQ 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +            +    +DD++  +S+SG + E+  +   A+   I  I++T  +++ V
Sbjct: 159 ATAFTDTHLVASLIANADKDDIVFAISFSGETQEIIELFAMAKEKGITTISLTQFSQTSV 218

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +  AD+ L             A T+S + QL I D L + +
Sbjct: 219 SALADVPLYTAH-SNEALIRSAATSSRLAQLFIIDVLFLGM 258


>gi|124028008|ref|YP_001013328.1| hypothetical protein Hbut_1146 [Hyperthermus butylicus DSM 5456]
 gi|123978702|gb|ABM80983.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 240

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 54/122 (44%), Gaps = 10/122 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS 284
              ++  V+   P+     ++  KRF  + VV E  KL G+I E D+  R F +      
Sbjct: 115 MERNVVYVEPTTPVYKVWQVMMSKRFAALPVVSE-GKLIGVIAEHDLIVRGFARPDFESP 173

Query: 285 --------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   V ++M   P  +L    L  A +L+ +  I  + VVDD +  +G+V   D++
Sbjct: 174 SGIRRGPLVRELMSTPPVTVLPTVPLLSAARLIVERYIGRVYVVDDDESLLGVVDRSDIV 233

Query: 337 RF 338
           R 
Sbjct: 234 RA 235



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 4/86 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             VVD+  KL G++   +I         +     VE+ M +N   +   T +    Q++ 
Sbjct: 77  APVVDDAGKLLGLVGLENIIGYVVNHEPEKLMKPVEEFMERNVVYVEPTTPVYKVWQVMM 136

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
               + L VV +  K IG++   DL+
Sbjct: 137 SKRFAALPVVSE-GKLIGVIAEHDLI 161



 Score = 43.3 bits (101), Expect = 0.056,   Method: Composition-based stats.
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 6/79 (7%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R F+  DF    P G          ++M +      V    PL+ A  ++ E+  G V V
Sbjct: 163 RGFARPDF--ESPSGI--RRGPLVRELMSTPPVT--VLPTVPLLSAARLIVERYIGRVYV 216

Query: 257 VDEGQKLKGIITEGDIFRN 275
           VD+ + L G++   DI R 
Sbjct: 217 VDDDESLLGVVDRSDIVRA 235


>gi|116750388|ref|YP_847075.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116699452|gb|ABK18640.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 132

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
           +      D    L    +  + V D   K+ G+++E D+       ++L    +  +M K
Sbjct: 18  REDTLARDVALQLLSGHYTGMPVTDAEGKVVGVVSEFDLLEAVFADRNLAQTKIGHLMSK 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N      +T ++  + ++++ NI  L +  +  K +GIV   D+LR
Sbjct: 78  NAITADVNTPISAILTIMKEQNIIRLPIT-EGGKLVGIVARHDILR 122



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 24/59 (40%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L    VM+K      EDTL       L   + + + V D   K +G+V   DLL  
Sbjct: 1   MRDLKAGTVMVKPVVSAREDTLARDVALQLLSGHYTGMPVTDAEGKVVGVVSEFDLLEA 59


>gi|295095451|emb|CBK84541.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 296

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 57/128 (44%), Gaps = 2/128 (1%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G S  I + +       G        A        ++   D+++V+S SG + ++K
Sbjct: 146 LYGVGGSNAICADIQHKFLRIGVRCQSYQDAHIMMMSASLLKEGDVVLVVSHSGRTSDVK 205

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           A +  A++    +I IT    S +A  AD ++  P          A  ++ I+QL + DA
Sbjct: 206 AAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDA 263

Query: 189 LAIALLES 196
           L +++ + 
Sbjct: 264 LFVSVAQQ 271


>gi|260459917|ref|ZP_05808170.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
 gi|259034128|gb|EEW35386.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
          Length = 286

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 4/167 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S++ ++           +E +   + R+ + G+G S  +    +  L   G       
Sbjct: 107 LLSMQQTVAANTERIITRTLELLDGAR-RIHLAGVGASSLVARDFSYKLMKLGRNVLHDS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     +   +   D++  LS+SG+S E   I   A +    +IA+T  + + ++  AD
Sbjct: 166 DSHIQMANAATLGPGDVLFALSYSGASIETLRIAELACKRGTMVIAVTGLHDNPLSRVAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           I L      +      +  T+   QLA+ D L I L++ R    ND+
Sbjct: 226 IRLYT--IADEERARSSSITARDAQLALTDLLFILLVQ-RQPDANDY 269


>gi|302879828|ref|YP_003848392.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Gallionella capsiferriformans
           ES-2]
 gi|302582617|gb|ADL56628.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Gallionella capsiferriformans
           ES-2]
          Length = 631

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 42/111 (37%), Gaps = 3/111 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLS 284
             +         + + +  + E R G +  +D+  + +GI+T  D+       +      
Sbjct: 170 RRAPVTCAPDTTVREVLARMHELRVGSMIAIDDQGRPQGILTLPDVLERIALPQINLDQP 229

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V  +M      +    L   A   + +     ++VVD+  + +G+V   DL
Sbjct: 230 VIGIMTTQLTFLPPQALAYEAALTMAKQGFRHVLVVDNE-RLVGLVSEKDL 279



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + P     DT +   +  + +  +  ++ +DD  +  GI+   D+L
Sbjct: 171 RAPVTCAPDTTVREVLARMHELRVGSMIAIDDQGRPQGILTLPDVL 216


>gi|187928395|ref|YP_001898882.1| inosine 5'-monophosphate dehydrogenase [Ralstonia pickettii 12J]
 gi|187725285|gb|ACD26450.1| inosine-5'-monophosphate dehydrogenase [Ralstonia pickettii 12J]
          Length = 487

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG+K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKVRDVMALSAQHGISGFPVL-EGKKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     + E   L  A +L+ +H +  ++VV +  +  G++   D+ + 
Sbjct: 152 TPSEKLVTVKEGASLEEAKRLMNKHRLERVLVVGEAFELRGLITVKDIQKA 202


>gi|163792664|ref|ZP_02186641.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium BAL199]
 gi|159182369|gb|EDP66878.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium BAL199]
          Length = 142

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 46/107 (42%), Gaps = 5/107 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMI 290
               P+ DA  +L+EKR G + ++ E  K+ GI++E DI R             V  +M 
Sbjct: 18  PPSMPVADAARLLAEKRIGSILIL-ERNKVAGILSERDIVRALANEGAGCLDGPVSRLMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                      +   MQ++       + VVD+  K  G++   D+++
Sbjct: 77  AKVVTCTPAQTIADVMQMMTTGRFRHVPVVDN-GKVAGMISIGDVVK 122



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   +  A +LL +  I  ++++ +  K  GI+   D++R 
Sbjct: 15  VTAPPSMPVADAARLLAEKRIGSILIL-ERNKVAGILSERDIVRA 58



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 12/43 (27%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 + D + +++  RF  V VVD   K+ G+I+ GD+ + 
Sbjct: 82  CTPAQTIADVMQMMTTGRFRHVPVVD-NGKVAGMISIGDVVKW 123


>gi|126652465|ref|ZP_01724637.1| nucleoside-diphosphate-sugar pyrophosphorylase [Bacillus sp.
           B14905]
 gi|126590736|gb|EAZ84851.1| nucleoside-diphosphate-sugar pyrophosphorylase [Bacillus sp.
           B14905]
          Length = 350

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 1/103 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVED 287
              LV     L++ + ++ +       +VDE Q+L G +T+GDI R   +     + +  
Sbjct: 5   KKTLVNQNHTLLETMKVIDDSSLQFAVIVDEEQQLLGTVTDGDIRRGILRGEGLDVKITS 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +M  NP             QL++   +  L +VD+  + I I+
Sbjct: 65  IMNPNPITAKSGQRYHKYKQLMKSKMLKQLPIVDENNRIINIL 107


>gi|303246714|ref|ZP_07332992.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
           JJ]
 gi|302492054|gb|EFL51932.1| protein of unknown function DUF190 [Desulfovibrio fructosovorans
           JJ]
          Length = 412

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 31/151 (20%), Positives = 51/151 (33%), Gaps = 20/151 (13%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
              G                 ++       PL   + +L       V V++    + GII
Sbjct: 99  RQRGLTARFHCPVRVRDVMATAVATANRDTPLPVVMDMLVSHDNKAVLVIESDGSVAGII 158

Query: 268 TEGDI--------------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           T GDI                     +N    ++  +  +VM      I + T L  A Q
Sbjct: 159 TGGDILMRGGMAARLSLQDILPEDIRKNERDKISGRTAGEVMTSPVVTINDRTSLRDAAQ 218

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+    +  L VVD   + +G+V  +D+LR 
Sbjct: 219 LMTGKGLKRLPVVDAAGELVGLVSRVDILRA 249



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 45/123 (36%), Gaps = 20/123 (16%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN------------- 281
              PL   +  +         VVD  + ++GII + D+ R                    
Sbjct: 284 PDTPLHQVVAAIVASPLRRAVVVDADKTVRGIILDSDLLRRCGPARKPGLIEALFSFGKP 343

Query: 282 -------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  T S  +VM  N   I ED  L   +Q +    +  L+VVDD  K +G+V    
Sbjct: 344 EETGACPTGSAAEVMEPNVLTIHEDATLMEVLQKMLAAKVKRLVVVDDAGKLLGMVDREA 403

Query: 335 LLR 337
           +LR
Sbjct: 404 ILR 406



 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/149 (20%), Positives = 48/149 (32%), Gaps = 17/149 (11%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
             D          G               +  +     L DA  +++ K    + VVD  
Sbjct: 180 PEDIRKNERDKISGRTAGEV-----MTSPVVTINDRTSLRDAAQLMTGKGLKRLPVVDAA 234

Query: 261 QKLKGIITEGDIFRN---FHKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQL 308
            +L G+++  DI R           L            DVMI +      DT L   +  
Sbjct: 235 GELVGLVSRVDILRAASDLAPSAQALPRFTAGLFQQARDVMITDVPTAFPDTPLHQVVAA 294

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    +   +VVD  +   GI+   DLLR
Sbjct: 295 IVASPLRRAVVVDADKTVRGIILDSDLLR 323


>gi|255263911|ref|ZP_05343253.1| CBS domain containing protein [Thalassiobium sp. R2A62]
 gi|255106246|gb|EET48920.1| CBS domain containing protein [Thalassiobium sp. R2A62]
          Length = 144

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNT 282
           S   +  V  G  + +   +LS+KR G V V   G +  GI++E DI R          T
Sbjct: 11  SDQGVITVLPGMSVGEVAAVLSKKRIGTVVVSASGSRADGILSERDIVRELGTRGVACMT 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            S  D+M  NP       +  V +  + Q     + VV    + +G++   D+++  +
Sbjct: 71  DSAADIMTVNPVTCAPTDVADVVLAKMTQGRFRHMPVV-KDGEMVGLITLGDVVKARL 127


>gi|254517706|ref|ZP_05129762.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
 gi|226911455|gb|EEH96656.1| transcriptional regulator [Clostridium sp. 7_2_43FAA]
          Length = 281

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 71/170 (41%), Gaps = 6/170 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  +  I      + +   ++      Q   A++ +   K  + I  +G S  +G     
Sbjct: 93  KNIIHGIKRSIDSIMN--QTISILKEDQLEKAIDLLNEAKN-IYIFSVGVSSLVGMDFYY 149

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L+                    ++ + D+ I +S+SG + E+      A++  +P+IAI
Sbjct: 150 KLSRINKRCIAHSDTHLQITSSALMEKGDIAIAISYSGETKEVIKCAENAKKAKVPVIAI 209

Query: 145 T-SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           T +   + +A  +DIVL +P   ++   G    +S I QL+I D L I +
Sbjct: 210 TKASINNTLADISDIVLQVPFVEKTLREGA--MSSRISQLSIIDMLFIGM 257


>gi|15615798|ref|NP_244102.1| acetoin dehydrogenase [Bacillus halodurans C-125]
 gi|10175859|dbj|BAB06955.1| acetoin dehydrogenase [Bacillus halodurans C-125]
          Length = 215

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLN 281
              ++  +     + +A   +  ++F  + V+ + + + GI+T+ DI       FH+D +
Sbjct: 7   MKRNVVTIHEQTTIKEAYQTMILEKFRHLPVITKSKDVIGIVTDQDIRDASPSIFHQDEH 66

Query: 282 T----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  V  +M K+   +     +    +LL ++ IS L V  + ++ +GIV   D+L
Sbjct: 67  QEDLQKPVSSIMTKDVITVHPLNSVAETARLLYENRISCLPVT-EGEQLVGIVTDTDVL 124



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E++M +N   I E T +  A Q +       L V+   +  IGIV   D+
Sbjct: 3   IEEIMKRNVVTIHEQTTIKEAYQTMILEKFRHLPVITKSKDVIGIVTDQDI 53



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 21/124 (16%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            + H       L    S +M     +  V     + +   +L E R  C+ V  EG++L 
Sbjct: 59  SIFHQDEHQEDLQKPVSSIM--TKDVITVHPLNSVAETARLLYENRISCLPVT-EGEQLV 115

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKN-P---KVILEDTLL---TVAMQLLRQH--NIS 315
           GI+T+ D+              ++M  + P     +  +           +++Q   NI+
Sbjct: 116 GIVTDTDVLHTLV---------ELMGAHQPSSQIYVRVENKAGQLADVAAIMKQRQMNIA 166

Query: 316 VLMV 319
            ++V
Sbjct: 167 SVLV 170


>gi|323493391|ref|ZP_08098513.1| hypothetical protein VIBR0546_13760 [Vibrio brasiliensis LMG 20546]
 gi|323312214|gb|EGA65356.1| hypothetical protein VIBR0546_13760 [Vibrio brasiliensis LMG 20546]
          Length = 629

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 12/117 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDLN- 281
           +     + +A   ++E+    + ++D         +   L GIIT+ D+  R   + L+ 
Sbjct: 163 IPKTESIQNAAIKMAEENVSSLLIIDPEVADDDEDDNSPLVGIITDRDLCTRVLAQGLDP 222

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  V  VM      +  +  +  AM  + ++N+  L V+   ++ IGI+   D++R+
Sbjct: 223 SDDVASVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KDKQPIGIIEATDIVRY 278


>gi|291440953|ref|ZP_06580343.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
 gi|291343848|gb|EFE70804.1| CBS domain-containing protein [Streptomyces ghanaensis ATCC 14672]
          Length = 219

 Score = 76.1 bits (186), Expect = 7e-12,   Method: Composition-based stats.
 Identities = 26/136 (19%), Positives = 55/136 (40%), Gaps = 20/136 (14%)

Query: 221 SDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------ 272
             ++    +  +V +G   P  + + ++  +    + V+++G ++ G+++E D+      
Sbjct: 2   PHIVRDVMTRSVVSVGRQTPFKEIVRLMRGRGVSALPVLEDGDRVVGVVSEADLLPKEEF 61

Query: 273 ----------FRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                      R     L    L+ E++M      +     L+ A  L+ +H +  L VV
Sbjct: 62  RDSDPDRRTQRRRLPDLLKAGALTAEELMTSPAVTVRAGVTLSDAAGLMTRHRVKRLPVV 121

Query: 321 DDCQKAIGIVHFLDLL 336
           D      G+V   DLL
Sbjct: 122 DGRGALEGVVSRADLL 137



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 38/105 (36%), Gaps = 7/105 (6%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLF-------VCASDVMHSGDSIPLVKIGCP 238
           GD +   + E+    + +F    P  +               +           V+ G  
Sbjct: 43  GDRVVGVVSEADLLPKEEFRDSDPDRRTQRRRLPDLLKAGALTAEELMTSPAVTVRAGVT 102

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           L DA  +++  R   + VVD    L+G+++  D+   F +D   L
Sbjct: 103 LSDAAGLMTRHRVKRLPVVDGRGALEGVVSRADLLEVFLRDDEEL 147


>gi|306829185|ref|ZP_07462375.1| CBS domain protein [Streptococcus mitis ATCC 6249]
 gi|304428271|gb|EFM31361.1| CBS domain protein [Streptococcus mitis ATCC 6249]
          Length = 218

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNQQ-VYGVITDRDVFQA 129



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD  Q++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NQQVYGVITDRDVFQAF 130


>gi|224081072|ref|XP_002306285.1| predicted protein [Populus trichocarpa]
 gi|222855734|gb|EEE93281.1| predicted protein [Populus trichocarpa]
          Length = 348

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/95 (27%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKNPKVILEDTLL 302
           ++ +R   V + D    L GI+T+ DI  R   + L      V  +M +NP  +  D+L 
Sbjct: 1   MAARRVNAVLLTDANALLSGIVTDKDISARVIAEGLRPEHTIVSKIMTRNPIFVTSDSLA 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+Q + Q     L VV++ +    ++  LD+ R
Sbjct: 61  IEALQKMVQGKFRHLPVVENGE----VIALLDITR 91



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + +     P+  A   + E R   V VV  G K++GI+T  D + R   ++
Sbjct: 145 STIIGEQSKVAIASPSDPVYAATKKMRELRVNSVIVV-TGNKIQGILTSKDILMRVVAQN 203

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           L+     VE VM  NP+ +  +T +  A+ ++       L VVD     
Sbjct: 204 LSPELTLVEKVMTLNPECVTLETTILDALHVMHDGKFLHLPVVDKDGSV 252


>gi|218295637|ref|ZP_03496433.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Thermus aquaticus Y51MC23]
 gi|218243796|gb|EED10323.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Thermus aquaticus Y51MC23]
          Length = 580

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 6/112 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLS 284
                 +  G  + +A   ++++    + V     +  GI+T+ D+  R   ++  ++  
Sbjct: 143 RRPPIYIAPGATVAEAARRMAQEGVSSLLV---EGEPLGILTDRDLRNRVLAQERPSSTP 199

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +V  +    +  DT L  A+  + +  I  L +++   K +G+V   DL+
Sbjct: 200 VGEVATRPLFALPADTPLYEALAAMVERGIHHLPLLEGA-KVVGVVTHTDLV 250



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 4/64 (6%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +      DL T  V  ++ + P  I     +  A + + Q  +S L+V     + +GI+ 
Sbjct: 126 LRAGVRADLFT-PVGRLVRRPPIYIAPGATVAEAARRMAQEGVSSLLV---EGEPLGILT 181

Query: 332 FLDL 335
             DL
Sbjct: 182 DRDL 185



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
               PL +A+  + E+    + ++ EG K+ G++T  D+   
Sbjct: 212 PADTPLYEALAAMVERGIHHLPLL-EGAKVVGVVTHTDLVPA 252


>gi|169826747|ref|YP_001696905.1| mannose-1-phosphate guanyltransferase 2 [Lysinibacillus sphaericus
           C3-41]
 gi|168991235|gb|ACA38775.1| Mannose-1-phosphate guanyltransferase 2 [Lysinibacillus sphaericus
           C3-41]
          Length = 350

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 1/103 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLSVED 287
              LV     L++ + I+         VVDE Q L G +T+GDI R   +     + +  
Sbjct: 5   QKTLVDQNHTLLETMKIIDNSSLQFAVVVDEEQHLLGTVTDGDIRRGILRGEGLDVKITS 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +M  NP             QL++   +  L +VD+  + I I+
Sbjct: 65  IMNPNPITAKSGQRYHKYKQLMKSKMLKQLPIVDENNRIINIL 107


>gi|314935778|ref|ZP_07843130.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis subsp. hominis C80]
 gi|313656343|gb|EFS20083.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus hominis subsp. hominis C80]
          Length = 290

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/191 (21%), Positives = 79/191 (41%), Gaps = 5/191 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K VT     L++N +V+   + +  + +  +SL+ S             E  K     + 
Sbjct: 77  KQVTPYNIKLVENESVESLKQKLYFQTK--TSLKQSNHFIDHQTIDAICETFKQAHT-IF 133

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G G S     +    L+  G     V         L    ++D ++ ++ SG   EL+
Sbjct: 134 LYGYGSSYVCALEFYQKLSRIGLNIQLVQDTHLLTTMLSTHNKNDCVVFITNSGEQSELQ 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           A++   + F++ +I ITS N + +A  +D+VL    E       ++ TT+   QL   D 
Sbjct: 194 AMVKVVKDFNLSMITITSSNNNSIAKDSDLVL-TYNEDYKNELCMSATTALFAQLYTIDI 252

Query: 189 LAIALLESRNF 199
           +      +RN+
Sbjct: 253 IFYR-FIARNY 262


>gi|222100721|ref|YP_002535289.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
 gi|221573111|gb|ACM23923.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
          Length = 150

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 51/128 (39%), Gaps = 23/128 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V     +   I +LS +    + VVD   ++ G ++E D+ +                  
Sbjct: 14  VFEDETVETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKALVPSYFSLLRSASFIPD 73

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +    + + M K P V+ ED  L VA   L +H    L VVDD  + +GI
Sbjct: 74  TNQLIRNIVKIKDKPISNYMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDDSMQLVGI 133

Query: 330 VHFLDLLR 337
           V  +D+LR
Sbjct: 134 VRRIDVLR 141



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 24/43 (55%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ED  +   ++LL + N+S + VVD   + +G V   DL++ 
Sbjct: 14  VFEDETVETVIKLLSRQNLSGIPVVDHDMRVVGFVSESDLIKA 56



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +      +VK   PLI A   L    F  + VVD+  +L GI+   D+ R   + 
Sbjct: 92  YMSKPPVVVKEDDPLIVAADYLIRHGFKSLPVVDDSMQLVGIVRRIDVLRVVSEG 146


>gi|209527414|ref|ZP_03275920.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
 gi|209492149|gb|EDZ92498.1| diguanylate cyclase with PAS/PAC sensor [Arthrospira maxima CS-328]
          Length = 1651

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 54/125 (43%), Gaps = 20/125 (16%)

Query: 234 KIGCPLIDAITILSE------------KRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
               PL+  I+++S              R  CV  V E  KL G+ITE D+ R     + 
Sbjct: 68  SPETPLMGVISMISPQPKSDSDRETQPHRKSCVLAV-EQGKLVGLITERDLVRLATQYRS 126

Query: 280 LNTLSVEDVMIKNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLD 334
            + L++  VM ++     I     +  A+ L+RQH I  L V+    + +G++      +
Sbjct: 127 FDHLTLAAVMTRDLVTLSIEPHQDIFTAITLMRQHQIRHLPVLSKTGELVGLISTQTLRE 186

Query: 335 LLRFG 339
            L+ G
Sbjct: 187 CLQPG 191



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 48/120 (40%), Gaps = 8/120 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFR--NFH 277
               +        ++    +++E R  CV + +            GI+TE  I +     
Sbjct: 203 MTRDVIHATPNASILHLAQLMAEYRVSCVVIAEPKIGDSFLCHPVGIVTERYIVKCSALD 262

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + + +   D+M      +     L VA + ++Q  +  L+V D+ Q+ +GI+    LL+
Sbjct: 263 LNFDRMMAADIMSSPLWCLHPTENLWVAHEQMQQRGVRRLVVCDEQQQLVGILTQTSLLQ 322


>gi|194017343|ref|ZP_03055955.1| 6-phospho 3-hexuloisomerase [Bacillus pumilus ATCC 7061]
 gi|194011211|gb|EDW20781.1| 6-phospho 3-hexuloisomerase [Bacillus pumilus ATCC 7061]
          Length = 185

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L          Q    V  +  ++ +V + G G+SG +G   A  L+  G  ++ V 
Sbjct: 11  LNELSEHSPAIQDDQAERLVSSLLTVR-KVFVAGAGRSGLMGKSFAMRLSHIGVKAYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +DL+IV S SG ++ L  +   A+     + + T   +S +A  +D
Sbjct: 70  ETNTP-----SFTEEDLLIVGSGSGRTETLLVLAKKAKAIGGKVASFTLSAESPLADQSD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            V+ L   P+    G    + P  S   Q  +   DA+ + L+E +       Y  H
Sbjct: 125 QVILLSGAPKDQQEGSHHTIQPMGSLFEQSLLLTYDAVILRLMEMKKLDTQTMYGHH 181


>gi|121604902|ref|YP_982231.1| inosine-5'-monophosphate dehydrogenase [Polaromonas
           naphthalenivorans CJ2]
 gi|120593871|gb|ABM37310.1| inosine-5'-monophosphate dehydrogenase [Polaromonas
           naphthalenivorans CJ2]
          Length = 489

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +         +  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVHKNLTPQEQAAHVAKVKRYESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  +       V D G K+ GI+T  D+      D+       +M 
Sbjct: 97  VVITPEHTVLQILELSEQLGISGFPVCD-GGKVVGIVTSRDLRFETRYDV---KAHQIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E T    A  LL +H +  ++VV+D  +  G++   D+ +
Sbjct: 153 PREKLITVKEGTSAAEAKALLNKHKLERVLVVNDAFELKGLITVKDITK 201


>gi|222148627|ref|YP_002549584.1| hypothetical protein Avi_2203 [Agrobacterium vitis S4]
 gi|221735613|gb|ACM36576.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 144

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +  V     L +A  +L   + G V VV    ++ GI TE D+     K    
Sbjct: 9   LSEKGRDVITVGPTVSLAEAAKVLHHNKIGAVVVVGMESRIVGIFTERDLASAIGKGGVE 68

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++ V   M  N     E+T +   M+++       + V +D  K IGIV   D+++  
Sbjct: 69  ALSMPVSKAMTANVFRCSEETTVNQLMEMMSSKRFRHVPV-EDGGKLIGIVSIGDVVKQR 127

Query: 340 I 340
           I
Sbjct: 128 I 128



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 3/76 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D       G +  L +  S  M +            +   + ++S KRF  V V +
Sbjct: 53  FTERDLASAIGKGGVEALSMPVSKAMTANVFRC--SEETTVNQLMEMMSSKRFRHVPV-E 109

Query: 259 EGQKLKGIITEGDIFR 274
           +G KL GI++ GD+ +
Sbjct: 110 DGGKLIGIVSIGDVVK 125


>gi|154249575|ref|YP_001410400.1| polynucleotide adenylyltransferase region [Fervidobacterium nodosum
           Rt17-B1]
 gi|154153511|gb|ABS60743.1| Polynucleotide adenylyltransferase region [Fervidobacterium nodosum
           Rt17-B1]
          Length = 883

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/101 (22%), Positives = 49/101 (48%), Gaps = 1/101 (0%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            + +   I+       + VV EG KL GI+T+  + +  +  L    ++ +M        
Sbjct: 334 SIEEVNKIMEITGHSGMPVV-EGNKLVGIVTKKTVDKALNHGLGKRPIKSIMSSKLITAK 392

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DT ++V  +L+ +++I  + ++D+    +GIV   D++R 
Sbjct: 393 LDTPVSVLRKLMIENDIGRIPILDENNILVGIVTRSDIIRA 433



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           K+  P+     ++ E   G + ++DE   L GI+T  DI R 
Sbjct: 392 KLDTPVSVLRKLMIENDIGRIPILDENNILVGIVTRSDIIRA 433



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 21/49 (42%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           L  +D+M    +  L    +    +++     S + VV +  K +GIV 
Sbjct: 316 LKAKDIMSSPVRTALATESIEEVNKIMEITGHSGMPVV-EGNKLVGIVT 363


>gi|186470615|ref|YP_001861933.1| signal-transduction protein [Burkholderia phymatum STM815]
 gi|184196924|gb|ACC74887.1| putative signal-transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 231

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 48/129 (37%), Gaps = 25/129 (19%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---------------- 277
           +    + +A   L + R   + VVD    L G+++EGD+                     
Sbjct: 15  QPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDLLHRVETGTETRRSRWLEVFST 74

Query: 278 -KDLNTL-------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +DL +        SV DVM  +   +     +     L+ +  I  + V+    K IGI
Sbjct: 75  TRDLASTFVKEHGRSVADVMTASVLTVDWQMPVADIADLMERRRIKRVPVM-RGGKLIGI 133

Query: 330 VHFLDLLRF 338
           V   +L+R 
Sbjct: 134 VTRGNLIRA 142



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 23/50 (46%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           DVM  +      D  +  A + L  + IS + VVD     +G+V   DLL
Sbjct: 5   DVMTPSVICAQPDMTVQEAAKRLVDNRISGMPVVDASGGLVGMVSEGDLL 54



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 21/102 (20%), Positives = 39/102 (38%), Gaps = 10/102 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    P+ D   ++  +R   V V+  G KL GI+T G++ R           +D     
Sbjct: 101 VDWQMPVADIADLMERRRIKRVPVM-RGGKLIGIVTRGNLIRALASAGAPARPQD----- 154

Query: 293 PKVILEDTLLTVAMQLLRQHN----ISVLMVVDDCQKAIGIV 330
            +V+ +  +    +  LR          ++V D      G++
Sbjct: 155 GQVVSDREIAEAIVAALRDKRWALTKENVIVKDGVAHLWGVI 196


>gi|269127025|ref|YP_003300395.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
 gi|268311983|gb|ACY98357.1| CBS domain containing membrane protein [Thermomonospora curvata DSM
           43183]
          Length = 201

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 15/125 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLS 284
               +  V     +  AI +L E       VVD+   + GI++E D+ R  F  D    +
Sbjct: 7   MTSPVVTVSPDATVRQAIRVLYEHNITAAPVVDDSGAMVGIVSEMDLLRGEFAADPRAFA 66

Query: 285 -------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                        V DVMI + +     T +    +++ +  I  + V+D     +G+V 
Sbjct: 67  RPVAGPHEPPPRLVRDVMITDVRTAQPTTDVAELAEMMMRTAIKSVPVLDGD-TLVGMVS 125

Query: 332 FLDLL 336
             DL+
Sbjct: 126 RRDLM 130



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M      +  D  +  A+++L +HNI+   VVDD    +GIV  +DLLR
Sbjct: 3   VREAMTSPVVTVSPDATVRQAIRVLYEHNITAAPVVDDSGAMVGIVSEMDLLR 55


>gi|157693096|ref|YP_001487558.1| 3-hexulose-6-phosphate isomerase [Bacillus pumilus SAFR-032]
 gi|157681854|gb|ABV62998.1| 3-hexulose-6-phosphate isomerase [Bacillus pumilus SAFR-032]
          Length = 185

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 71/177 (40%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L          Q    V  I   + +V ++G G+SG +G   A  L   G  ++ + 
Sbjct: 11  LNELSEHSPDIQDEQAERLVSSIFTAR-KVFVSGAGRSGLMGKSFAMRLTHIGVKAYVIG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +D++IV S SG ++ L  +   A+     + A T   +S +A  +D
Sbjct: 70  ETNTP-----SFTEEDILIVGSGSGRTETLLVLAKKAKAIGGKVAAFTLSAQSPLADLSD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            V+ L   P+    G    + P  S   Q  +   DA+ + L+E +    +  Y  H
Sbjct: 125 EVILLSGAPKDQQGGSHDTIQPMGSLFEQSLLLTYDAVILRLMEMKELDTHTMYGHH 181


>gi|311893793|dbj|BAJ26201.1| hypothetical protein KSE_03540 [Kitasatospora setae KM-6054]
          Length = 140

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 6/125 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-- 274
              A ++MH G     V     L +A  I+ ++  G + +  +GQ+L GI+T+ DI    
Sbjct: 1   MTTAKEIMHPGAEC--VTGEQTLAEAARIMRDRGVGALPICGDGQQLLGILTDRDIVLKC 58

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHF 332
               +D   +   ++ +  P VI ED    + + L+ +H +  L V++    K +G++  
Sbjct: 59  VAEGRDPAAVRCRELAVGRPMVIEEDEEAELVLALMEEHRVRRLPVINHPDHKLVGMISE 118

Query: 333 LDLLR 337
            D+ R
Sbjct: 119 ADIAR 123


>gi|225849247|ref|YP_002729411.1| cyclic nucleotide binding protein [Sulfurihydrogenibium azorense
           Az-Fu1]
 gi|225644589|gb|ACN99639.1| cyclic nucleotide binding protein [Sulfurihydrogenibium azorense
           Az-Fu1]
          Length = 602

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 57/107 (53%), Gaps = 4/107 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVM 289
           +V+    + +A+  ++E++   ++++ +     GI+T+ D+ +     K      + D+ 
Sbjct: 151 IVESSSSIYEAVKKMTEEK--ALSIIVKYSDTYGIVTDSDLRKKVILSKKNVEDPIGDIA 208

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            KN   +  DT L  A+  + +HNI  +++ D+  + IG+++ +D+L
Sbjct: 209 NKNIISVNPDTFLFDAIITMIKHNIKRVVIKDENNQIIGVLNEVDIL 255


>gi|284162405|ref|YP_003401028.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012402|gb|ADB58355.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 288

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V+      DA+ ++ EK  G   +VD   K+ GI+TE DI +           V D M  
Sbjct: 97  VRYTDSWEDAVELMIEKNVGGCPIVDNDGKVFGIVTERDIVKFLASQRRLDGVVRDYMTP 156

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  +T +  AM+++    I  L +V       GI+   D LR+
Sbjct: 157 RVVTVTPNTTVREAMEIMISKRIRRLPIV-KDGILYGILVSTDFLRY 202



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 17/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTL- 283
           +   +  +     +++A+  +    F  + V D G +KL GI++  DI            
Sbjct: 10  ATRDVKTIPPRSTIMNALKTMVNAGFRRMPVADAGTKKLMGIVSATDIINFLGGGEKHKI 69

Query: 284 ---------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                          S++++M ++   +        A++L+ + N+    +VD+  K  G
Sbjct: 70  VENRYEGNLAKAINESIDEIMTRDVVSVRYTDSWEDAVELMIEKNVGGCPIVDNDGKVFG 129

Query: 329 IVHFLDLLRF 338
           IV   D+++F
Sbjct: 130 IVTERDIVKF 139



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 21/118 (17%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL------------SVED 287
            +A+ I+  KR   + +V +   L GI+   D  R F KD   +            S+ +
Sbjct: 168 REAMEIMISKRIRRLPIV-KDGILYGILVSTDFLRYFAKDAFKMLETGNIKDVLNKSIHE 226

Query: 288 VMI-------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +         + P V      ++  ++ + +  +   ++V +  K  GI+   DL++F
Sbjct: 227 IASNSNVLKYREPLVFESRDKISDVVRSMVEKGVGCALIV-ENGKLEGIITERDLMKF 283



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHS----GDSIPLVKIG-CPLIDAITILSEKRF 251
           R F+++ F +L  G     L     ++  +        PLV      + D +  + EK  
Sbjct: 201 RYFAKDAFKMLETGNIKDVLNKSIHEIASNSNVLKYREPLVFESRDKISDVVRSMVEKGV 260

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
           GC  +V E  KL+GIITE D+ +  + ++
Sbjct: 261 GCALIV-ENGKLEGIITERDLMKFLYSNI 288



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           SV ++  ++ K I   + +  A++ +       + V D   +K +GIV   D++
Sbjct: 5   SVMNLATRDVKTIPPRSTIMNALKTMVNAGFRRMPVADAGTKKLMGIVSATDII 58


>gi|222530248|ref|YP_002574130.1| CBS domain containing protein [Caldicellulosiruptor bescii DSM
           6725]
 gi|222457095|gb|ACM61357.1| CBS domain containing protein [Caldicellulosiruptor bescii DSM
           6725]
          Length = 123

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKYALEQMQKRKKSVAVVVDENNFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+H+IS + VVD+  K IG++   D++
Sbjct: 75  VITASQNDDIKQVAKLLREHDISAVPVVDN-GKVIGLIGLEDIV 117


>gi|15790611|ref|NP_280435.1| hypothetical protein VNG1663C [Halobacterium sp. NRC-1]
 gi|169236349|ref|YP_001689549.1| CBS domain-containing protein [Halobacterium salinarum R1]
 gi|10581133|gb|AAG19915.1| conserved hypothetical protein [Halobacterium sp. NRC-1]
 gi|167727415|emb|CAP14203.1| CBS domain protein [Halobacterium salinarum R1]
          Length = 380

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 1/126 (0%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             + +     + V       P V     + +   +L E       V  E   L G+ITE 
Sbjct: 51  QLIQSHIGDDTRVAAMVTDAPKVSRTEDVRETARMLVEGGTKIAPVF-EAGSLWGVITED 109

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            I      +L+ L V D+  ++   + ED  +   + LLR+H IS L VVDD     GIV
Sbjct: 110 AILDAVLANLDALDVRDIYTEHVVTVDEDDSMGRVINLLREHGISRLPVVDDAGLLSGIV 169

Query: 331 HFLDLL 336
              D++
Sbjct: 170 TRYDIV 175



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 52/129 (40%), Gaps = 17/129 (13%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------- 279
            + +  V     +   I +L E     + VVD+   L GI+T  DI     +D       
Sbjct: 129 TEHVVTVDEDDSMGRVINLLREHGISRLPVVDDAGLLSGIVTRYDIVDFVVRDTEKTTVG 188

Query: 280 --------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAI-GI 329
                   L  L V D M    K    D  +  A+  +  H+ S ++V  DD ++A+ GI
Sbjct: 189 DRSGEIERLLDLPVSDEMTSPVKTASFDDSVRDAVDDMLAHDYSGVIVTPDDDERAVGGI 248

Query: 330 VHFLDLLRF 338
           +   D+LR 
Sbjct: 249 LTKTDVLRA 257


>gi|322387419|ref|ZP_08061029.1| CBS domain protein [Streptococcus infantis ATCC 700779]
 gi|321141948|gb|EFX37443.1| CBS domain protein [Streptococcus infantis ATCC 700779]
          Length = 218

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 51/118 (43%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIFEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+  +  G++   D+   
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDN-GQLYGVITDRDVFSA 129



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++  K +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIEND-KLVGLVT 48



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   +L G+IT+ D+F  F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NGQLYGVITDRDVFSAF 130


>gi|297559454|ref|YP_003678428.1| RpiR family transcriptional regulator [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
 gi|296843902|gb|ADH65922.1| transcriptional regulator, RpiR family [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 327

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 41/177 (23%), Positives = 75/177 (42%), Gaps = 7/177 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           ++ V    +    + R +    ++L  E+       ++ +   + R+ + G+G S  +G+
Sbjct: 117 DTLVTVVQKIAYTDARAVEETGAALDVEV---LRTVIDTMAGAR-RIDVYGVGASAFVGA 172

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L   G  SF    A        ++   D+ I +S SG++ +    L  A R    
Sbjct: 173 DLQQKLHRIGLTSFAWSDAHVMLTSAALLDERDVAIGISHSGTTIDTVQALTEAGRRGAR 232

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +A+T+  +S +   AD VLT      +   G   T S + QL + D L + L +SR
Sbjct: 233 TVAVTNFPRSPIG-FADHVLTTAARETTFRSGA--TASRLAQLTVVDCLFVGLAQSR 286


>gi|197286803|ref|YP_002152675.1| RpiR family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227355006|ref|ZP_03839417.1| RpiR family transcription regulator [Proteus mirabilis ATCC 29906]
 gi|194684290|emb|CAR45851.1| RpiR-family transcriptional regulator [Proteus mirabilis HI4320]
 gi|227164793|gb|EEI49640.1| RpiR family transcription regulator [Proteus mirabilis ATCC 29906]
          Length = 295

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 36/160 (22%), Positives = 58/160 (36%), Gaps = 3/160 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q   AV  + +    V I G+G SG     L + L   G     V    
Sbjct: 121 LSETLNLLDMQQVQGAVNALLSA-NYVFICGVGSSGITAEDLKNKLMRIGYRVDAVTNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ I +S SG+S E    L  A+      IA+T    S +  +AD  L
Sbjct: 180 FMYMQASLLKSGDVAIGISHSGNSLETVHALKLAKEAGASTIALTHNLGSQIMEYADHHL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
                            +   QL + D L   L++++  +
Sbjct: 240 INGNRQGKLQGDSI--GTKTAQLFVLDLLYTLLVQAKPET 277


>gi|190891883|ref|YP_001978425.1| inosine-5'-monophosphate dehydrogenase [Rhizobium etli CIAT 652]
 gi|218509495|ref|ZP_03507373.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
           etli Brasil 5]
 gi|190697162|gb|ACE91247.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
           etli CIAT 652]
          Length = 144

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIK 291
               + +A  ILS+K+ G + VV    ++ G+ TE D+        KD    S+  VM  
Sbjct: 21  PNTTVAEAAVILSKKKIGAIVVVGMENRISGMFTERDLVHAIAKHGKDGLDQSLGQVMTA 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 E+T +   M+L+       + V +   K  GI+   D+++  I
Sbjct: 81  KVYRCHEETTVNELMELMTSRRFRHVPV-ESHGKLAGIISIGDVVKSRI 128



 Score = 39.1 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVVTAGPNTTVAEAAVILSKKKIGAIVVVGMENRISGMFTERDLVHA 61


>gi|170757000|ref|YP_001782331.1| nucleotidyl transferase [Clostridium botulinum B1 str. Okra]
 gi|169122212|gb|ACA46048.1| nucleotidyl transferase [Clostridium botulinum B1 str. Okra]
          Length = 358

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 54/113 (47%), Gaps = 2/113 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TL 283
                  LV     L++ +  ++  + G   VVD+  KL G IT+GDI R   ++++   
Sbjct: 1   MKNLGNILVCESTTLLETLNAINLNQKGTAIVVDKENKLLGTITDGDIRRAILENISLNS 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           S++++  KN     E   LT AMQ     +I ++ +++  QK    +   D+L
Sbjct: 61  SIKNIYNKNCICFNESYDLTKAMQYF-TKSIKLIPIINKNQKVTSYLELTDVL 112


>gi|167746159|ref|ZP_02418286.1| hypothetical protein ANACAC_00855 [Anaerostipes caccae DSM 14662]
 gi|317473291|ref|ZP_07932586.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
 gi|167654674|gb|EDR98803.1| hypothetical protein ANACAC_00855 [Anaerostipes caccae DSM 14662]
 gi|316899127|gb|EFV21146.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
          Length = 186

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 12/173 (6%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
             E+  +   AVEK+     R+ I+G G+SG      ++ L   G   +FV         
Sbjct: 18  AKEVDNEQIEAVEKLITEAKRIFISGAGRSGFAARGFSNRLMHLGYTVYFVGEPTTP--- 74

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
              I   DL+IV S SG++  L +    A+     +  IT   ++ +   AD V+TLP  
Sbjct: 75  --SIQAGDLLIVGSGSGNTASLVSNAKKAKSQGAKVATITMFPENTIGSMADAVITLPGV 132

Query: 166 PESCPHG-----LAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLHPGG 211
            + C +      +    S   QL+    D + + L+   + S++D +  H   
Sbjct: 133 TKKCDNHEGAGTVQAAGSGFEQLSWITYDCMVMDLMRITSQSDDDLFARHANM 185


>gi|160932207|ref|ZP_02079598.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
 gi|156868809|gb|EDO62181.1| hypothetical protein CLOLEP_01042 [Clostridium leptum DSM 753]
          Length = 149

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V  G  L +A  ++ E   G + VV  G +LKG++T+ DI        K+ + +    +M
Sbjct: 16  VLPGDTLEEAARLMKEHDVGVLPVV-SGGELKGLVTDRDIVLQCVAAGKEPSQVKAYQIM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K+   +     ++ A +L+ +  I  L V+       G++   D+ R
Sbjct: 75  TKDVVSVSPGHTVSEAARLMGKEQIRRLPVI-KDGVIDGMISMADIAR 121



 Score = 49.1 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM K    +L    L  A +L+++H++ VL VV    +  G+V   D++
Sbjct: 4   TVNDVMSKKVVAVLPGDTLEEAARLMKEHDVGVLPVV-SGGELKGLVTDRDIV 55


>gi|146309135|ref|YP_001189600.1| signal-transduction protein [Pseudomonas mendocina ymp]
 gi|145577336|gb|ABP86868.1| putative signal-transduction protein with CBS domains [Pseudomonas
           mendocina ymp]
          Length = 146

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 52/108 (48%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLN--TLSVEDVM 289
           V     L+D + I++EK  G + VV  G +L GI++E D  R     DL+     +  +M
Sbjct: 19  VDSEDSLVDGLRIMAEKGVGAL-VVMSGGRLVGIVSERDYVRKVALADLSVLETKISHIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++   +     +   M+L+ +  +  L V+    + IG++   DL++
Sbjct: 78  TRDVISVGPRDSVQHCMELMTERRLRHLPVL-AEGELIGLLSIGDLVK 124


>gi|296132174|ref|YP_003639421.1| putative PAS/PAC sensor protein [Thermincola sp. JR]
 gi|296030752|gb|ADG81520.1| putative PAS/PAC sensor protein [Thermincola potens JR]
          Length = 222

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 5/102 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
               P+  A  I  E+      VVD   ++ GI T+  + R   K L  + VE +M KN 
Sbjct: 17  HKDWPVRKAAQIFLERVIDGAPVVDNENRVVGIFTKTHLMRALDKSL-DMPVERLMNKNV 75

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             I E   +  A+ +     +  L VVDD    +G +   DL
Sbjct: 76  IFISETLPVEEALNI----PVGRLPVVDDDGNMVGWLTRTDL 113



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++DVM K    + +D  +  A Q+  +  I    VVD+  + +GI     L+R 
Sbjct: 5   IKDVMSKGVVKLHKDWPVRKAAQIFLERVIDGAPVVDNENRVVGIFTKTHLMRA 58


>gi|153001495|ref|YP_001367176.1| nucleotidyl transferase [Shewanella baltica OS185]
 gi|160876232|ref|YP_001555548.1| nucleotidyl transferase [Shewanella baltica OS195]
 gi|151366113|gb|ABS09113.1| Nucleotidyl transferase [Shewanella baltica OS185]
 gi|160861754|gb|ABX50288.1| Nucleotidyl transferase [Shewanella baltica OS195]
 gi|315268421|gb|ADT95274.1| Nucleotidyl transferase [Shewanella baltica OS678]
          Length = 350

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 28/100 (28%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              ++K    ++ AI IL+ +    V VV++   L+G IT+GDI R   + ++   SVE+
Sbjct: 6   KKSVIKPSDTILRAIEILNNEVLKVVLVVNDSGCLRGTITDGDIRRGILRGVSLQSSVEE 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +M  NP   +  T      +++ Q +I+ + ++D+  K I
Sbjct: 66  IMFVNPVTAINGTPKRELAKIMDQKSITSIPILDN-GKVI 104


>gi|126178656|ref|YP_001046621.1| sugar isomerase (SIS) [Methanoculleus marisnigri JR1]
 gi|125861450|gb|ABN56639.1| 3-hexulose-6-phosphate isomerase [Methanoculleus marisnigri JR1]
          Length = 205

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 40/207 (19%), Positives = 70/207 (33%), Gaps = 45/207 (21%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           LM +   + A R+I  E  G                   +E+I   K R+ + G G+SG 
Sbjct: 14  LMTSRLEETA-RTIEQENAG-----------------RFLEEILNAK-RIYLAGAGRSGL 54

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +    A  L   G  S+ +               +D+++  S SG +  +      AR  
Sbjct: 55  VARAFAQRLMHLGFESYVIGETITP-----AFGPEDVLVAFSGSGETRSVVDACETAREI 109

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEP-------------------ESCPHGLAPTTS 178
              +  +TS  +S +   AD ++ +                        S     AP  +
Sbjct: 110 GGTICLVTSTPESHIGRMADCIVEIGNNRLKDADIPRDFEIRQLTGQYRSVSGSFAPLGT 169

Query: 179 AIMQLA--IGDALAIALLESRNFSEND 203
                A    DA+  AL+E R+ +  +
Sbjct: 170 LFETAALVFSDAIVSALMEVRHCTAEE 196


>gi|269123813|ref|YP_003306390.1| transcriptional regulator, RpiR family [Streptobacillus
           moniliformis DSM 12112]
 gi|268315139|gb|ACZ01513.1| transcriptional regulator, RpiR family [Streptobacillus
           moniliformis DSM 12112]
          Length = 272

 Score = 76.1 bits (186), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 38/158 (24%), Positives = 65/158 (41%), Gaps = 3/158 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
            E   + +++++           A+E I+  K ++ + G+G SG    +  +     G  
Sbjct: 91  IEYNIIETIKNTKNLINKEDVENAIEAIENSK-KLYVFGMGASGVAALEFQNRFMRFGKI 149

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
              V             T  D+I+V+S SG + +L   L  A+     +IAIT+   S +
Sbjct: 150 GHSVSDGHFQVMYASTTTEKDVIVVISLSGETVDLIYPLSIAKENGCKIIAITNYILSPI 209

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           A  +DIV+    +      G     S + QL I D LA
Sbjct: 210 AKLSDIVILTSGKETLLNGGAL--VSKMSQLYIIDVLA 245


>gi|313891880|ref|ZP_07825485.1| CBS domain protein [Dialister microaerophilus UPII 345-E]
 gi|329121056|ref|ZP_08249687.1| hypothetical protein HMPREF9083_0148 [Dialister micraerophilus DSM
           19965]
 gi|313119874|gb|EFR43061.1| CBS domain protein [Dialister microaerophilus UPII 345-E]
 gi|327471218|gb|EGF16672.1| hypothetical protein HMPREF9083_0148 [Dialister micraerophilus DSM
           19965]
          Length = 163

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 46/132 (34%), Gaps = 27/132 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     + D + I  E     + VV E   L GII+EGD+     +              
Sbjct: 19  VSADINIHDLVKIFVEHPVSALPVVGEKNTLLGIISEGDLLYKKVRPYVPQYMDVLGAGV 78

Query: 279 -------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                         L      ++M  N   +  DT L     L+   ++  + VV+   K
Sbjct: 79  YYWGYGRFASSFRKLLATKASEIMTTNVHCVAPDTNLETVTTLMIDEHLKSVPVVESPNK 138

Query: 326 AIGIVHFLDLLR 337
            +G++   D+L+
Sbjct: 139 LVGMITRHDILQ 150



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +D M K+   +  D  +   +++  +H +S L VV +    +GI+   DLL   +
Sbjct: 8   AKDFMSKDIISVSADINIHDLVKIFVEHPVSALPVVGEKNTLLGIISEGDLLYKKV 63


>gi|241662971|ref|YP_002981331.1| inosine 5'-monophosphate dehydrogenase [Ralstonia pickettii 12D]
 gi|309782110|ref|ZP_07676840.1| inosine-5'-monophosphate dehydrogenase [Ralstonia sp. 5_7_47FAA]
 gi|240864998|gb|ACS62659.1| inosine-5'-monophosphate dehydrogenase [Ralstonia pickettii 12D]
 gi|308919176|gb|EFP64843.1| inosine-5'-monophosphate dehydrogenase [Ralstonia sp. 5_7_47FAA]
          Length = 487

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 65/171 (38%), Gaps = 15/171 (8%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----DS 229
            P  SA M       LAIA+ +          ++H   K        + V          
Sbjct: 41  IPLVSAAMDTVTEARLAIAMAQQGGIG-----IVHKNLKPEEQAREVAKVKRFESGVLRD 95

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
              +     + D + + ++       V+ EG+K+ GIIT  D+   F ++L    V   M
Sbjct: 96  PITIGPDMKIRDVMALSAQHGISGFPVL-EGKKVVGIITNRDLR--FEEEL-DAPVRAKM 151

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +     + E   L  A +L+ +H +  ++VV +  +  G++   D+ + 
Sbjct: 152 TPSEKLVTVKEGASLEEAKRLMNKHRLERVLVVGEAFELRGLITVKDIQKA 202


>gi|94499919|ref|ZP_01306455.1| transcriptional regulator, RpiR family protein [Oceanobacter sp.
           RED65]
 gi|94428120|gb|EAT13094.1| transcriptional regulator, RpiR family protein [Oceanobacter sp.
           RED65]
          Length = 270

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 31/178 (17%), Positives = 68/178 (38%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +++ +   +        +   +  L  +   Q   AV  +   + RV   G G SG +  
Sbjct: 76  DTSAEIINKVFDTSMNQMIRAKQQLDAD---QMTHAVSALMRSR-RVEFYGFGASGAVAM 131

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +  DD+++ +S SG + +L   +  A++    
Sbjct: 132 DAMHKFFRLEFSAVAYSDPHMQSMSAVTLEEDDVVVAISQSGRTKDLLHAMELAKQQGAH 191

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +I+++    S VA  AD+ + +    ++      P TS I+ L + D LA+ + + + 
Sbjct: 192 VISLSP-PNSPVAQLADLPIDVHINEDTDVF--TPMTSRIVHLMVIDCLAVGVAQRKG 246


>gi|317485224|ref|ZP_07944105.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
 gi|316923515|gb|EFV44720.1| CBS domain pair [Bilophila wadsworthia 3_1_6]
          Length = 140

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 53/119 (44%), Gaps = 12/119 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLN 281
           +    L D  +++   +   + V ++G +  G++T  D+                 +  +
Sbjct: 16  RRTDTLQDVRSLMQLAKIRHIPVTEDGDRFVGLLTHRDLLGYAVSHLAEINREEQEEIES 75

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ V D+M  + + +  DTLL  A ++L ++    L V+D   K +GI+   D LR  I
Sbjct: 76  SILVGDIMQTDVRTVAPDTLLREAAEILYRNKYGCLPVLDGDNKLVGIITEADFLRLAI 134



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 24/49 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               +  V     L +A  IL   ++GC+ V+D   KL GIITE D  R
Sbjct: 83  MQTDVRTVAPDTLLREAAEILYRNKYGCLPVLDGDNKLVGIITEADFLR 131



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V D+M      +     L     L++   I  + V +D  + +G++   DLL + +
Sbjct: 4   VSDLMTSRVFTLRRTDTLQDVRSLMQLAKIRHIPVTEDGDRFVGLLTHRDLLGYAV 59


>gi|300311579|ref|YP_003775671.1| CBS domain-containing protein [Herbaspirillum seropedicae SmR1]
 gi|300074364|gb|ADJ63763.1| CBS domain containing protein [Herbaspirillum seropedicae SmR1]
          Length = 170

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL--NT 282
               +  +K    +I A   +     G + V D  Q+L G++T+ DI  R   +     T
Sbjct: 11  MTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQRLVGLVTDRDIVLRGVARKRLTET 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             + +VM  +     ED  +   +  + Q  I  L V+D  +  +G+V   D
Sbjct: 71  TPLTEVMSHDVLWCYEDEPVDDVLDDMVQRQIRRLPVMDRQKNLVGMVSLGD 122



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T ++ DVM +    +  D  +  A Q +   ++  L V D  Q+ +G+V   D++  G+
Sbjct: 4   TRTIADVMTRGVHTLKPDDTVIRAAQAMEALDVGALPVCDGDQRLVGLVTDRDIVLRGV 62


>gi|163791488|ref|ZP_02185895.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Carnobacterium sp. AT7]
 gi|159873253|gb|EDP67350.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Carnobacterium sp. AT7]
          Length = 292

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 35/184 (19%), Positives = 68/184 (36%), Gaps = 6/184 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++S+   A + + + K  L +L  SL  E   + + A+  I   +  +   G G S  I 
Sbjct: 96  EDSSYAIAQKLVYSNKLALDNLIGSLDEE---RINQALNLIYDSQT-IHFFGQGASSVIA 151

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T     ++            +  +D + + S SG ++E   +    R   +
Sbjct: 152 LDSYHKFLRTRFLCNYISDYHMQLSYATKLGPNDCVFLFSHSGETNETIEVARILRNNQV 211

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I +T  + + +   + I   +  E  +        TS I+ L I D L +AL+     
Sbjct: 212 NIIVLTGNHHTDLVKLSSISFVVDSEESAFQSETL--TSRILYLTIIDILYVALMYHDEA 269

Query: 200 SEND 203
              D
Sbjct: 270 KNKD 273


>gi|126178350|ref|YP_001046315.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125861144|gb|ABN56333.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 378

 Score = 75.7 bits (185), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+   PL   + ++ E +     VVD    L GI+   D+ +    D   + V
Sbjct: 261 MSSPVVTVEPTLPLPRVVDMMYETKHLGFPVVDR-GSLAGIVALADVHKISPIDREAMQV 319

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            DVM ++P V+     L  A++++    I  + VV+D    +GIV   D+LR
Sbjct: 320 RDVMTRDPTVLPPSAPLIDALRIITGQEIGRIPVVEDD-TLVGIVTRTDVLR 370



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +H    +    +   DVM       ++    PLIDA+ I++ +  G + VV E   L 
Sbjct: 304 ADVHKISPIDREAMQVRDVM--TRDPTVLPPSAPLIDALRIITGQEIGRIPVV-EDDTLV 360

Query: 265 GIITEGDIFRNFH 277
           GI+T  D+ R   
Sbjct: 361 GIVTRTDVLRVME 373


>gi|317052524|ref|YP_004113640.1| CBS domain-containing protein [Desulfurispirillum indicum S5]
 gi|316947608|gb|ADU67084.1| CBS domain containing protein [Desulfurispirillum indicum S5]
          Length = 159

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 49/140 (35%), Gaps = 27/140 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              S   V     + D   +  EK      V+D   KL GIIT+ DI     +       
Sbjct: 8   MSTSPICVAPDHSIKDTARLFLEKDISGAPVLDASGKLVGIITKKDIIDTIKELKLPRMI 67

Query: 279 --------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                ++ + V + M +    +   T +     +L + ++ ++ 
Sbjct: 68  NLFDAIIYLENTEEYNHELGKISAVQVAEAMTRKVVTVDPQTDIAKVAGILSESHVHMVP 127

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD+  +  GIV   D++R 
Sbjct: 128 VVDEGNRVQGIVSTTDIMRA 147



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M  +P  +  D  +    +L  + +IS   V+D   K +GI+   D++
Sbjct: 2   TTAKDIMSTSPICVAPDHSIKDTARLFLEKDISGAPVLDASGKLVGIITKKDII 55



 Score = 43.0 bits (100), Expect = 0.070,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 24/60 (40%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +  V     +     ILSE     V VVDEG +++GI++  DI R    D
Sbjct: 92  VQVAEAMTRKVVTVDPQTDIAKVAGILSESHVHMVPVVDEGNRVQGIVSTTDIMRAIAYD 151


>gi|284176977|gb|ADB81392.1| putative CBS domain protein [Pseudomonas sp. 1-7]
          Length = 146

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 57/127 (44%), Gaps = 5/127 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           T+       +     +  +     ++DA+ ++++K  G +AVV E  ++ G+++E D  R
Sbjct: 3   TVAHLLKLKVMQNQKVHSIYPCEMVLDALKLMADKNIGALAVV-ENGQVVGVVSERDYAR 61

Query: 275 NF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 +      V D+M      +  +  +   M ++ + ++  L VV +  + IG++ 
Sbjct: 62  KVVLKGRSSVGTPVRDIMNSPVITVSANLCVEHCMTIMTESHLRHLPVV-EDGELIGLLS 120

Query: 332 FLDLLRF 338
             DL++ 
Sbjct: 121 IGDLVKE 127


>gi|320100379|ref|YP_004175971.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
 gi|319752731|gb|ADV64489.1| putative signal transduction protein with CBS domains
           [Desulfurococcus mucosus DSM 2162]
          Length = 320

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 48/132 (36%), Gaps = 2/132 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                + +     +       +   + +   L   +  +     G V V+D    + GII
Sbjct: 105 RHAYNIYSALERETVDTIMVKNPIHLYVDDTLTRVLESMIIHGIGVVPVLDRDGAVYGII 164

Query: 268 TEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           TE D+ R  +      L V + M +    I  D  L  A++ +  +    L V       
Sbjct: 165 TEHDLVRYLYGIATTGLKVAEAMSRPVVTIGIDASLKKALEKMTTYGFRRLPVTSGDN-V 223

Query: 327 IGIVHFLDLLRF 338
            G++  +D++++
Sbjct: 224 AGMLTAMDVVKY 235



 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 57/130 (43%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
           +  +  +V     L+ A+  +S      + V D G++L+G++T GDI             
Sbjct: 44  ARRNPRVVYPSTTLLKALEEMSLYG-RSLIVSDSGRRLRGLLTLGDIVSYLGGGEYYRIV 102

Query: 280 -----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                      L   +V+ +M+KNP  +  D  LT  ++ +  H I V+ V+D      G
Sbjct: 103 AERHAYNIYSALERETVDTIMVKNPIHLYVDDTLTRVLESMIIHGIGVVPVLDRDGAVYG 162

Query: 329 IVHFLDLLRF 338
           I+   DL+R+
Sbjct: 163 IITEHDLVRY 172



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 52/124 (41%), Gaps = 14/124 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  + I   L  A+  ++   F  + V      + G++T  D+ + F         
Sbjct: 187 MSRPVVTIGIDASLKKALEKMTTYGFRRLPVTSGDN-VAGMLTAMDVVKYFGDHRALRDA 245

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +++++  VE++M +    +     L  A+Q +   ++S ++VVDD     GI+  
Sbjct: 246 ASGDIREVHSKPVEELMSRELVTVKPGDDLATAIQEMMDKDVSSVLVVDDEGVLQGILTE 305

Query: 333 LDLL 336
            D+L
Sbjct: 306 RDVL 309



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 24/62 (38%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  VK G  L  AI  + +K    V VVD+   L+GI+TE D+  
Sbjct: 251 REVHSKPVEELMSRELVTVKPGDDLATAIQEMMDKDVSSVLVVDDEGVLQGILTERDVLY 310

Query: 275 NF 276
             
Sbjct: 311 AL 312



 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +NP+V+   T L  A++ +  +    L+V D  ++  G++   D++
Sbjct: 43  IARRNPRVVYPSTTLLKALEEMSLYG-RSLIVSDSGRRLRGLLTLGDIV 90


>gi|325959812|ref|YP_004291278.1| major facilitator superfamily protein [Methanobacterium sp. AL-21]
 gi|325331244|gb|ADZ10306.1| major facilitator superfamily MFS_1 [Methanobacterium sp. AL-21]
          Length = 559

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 32/162 (19%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
              D  +  P                   ++  VK+   +++ + + ++ R G   V+D 
Sbjct: 393 KSEDIAMEKP------EKRTLIVKDFMVSNLISVKLDSTILELLKLFTKYRIGGAPVLDS 446

Query: 260 GQKLKGIITEGDIFRNFH-------------------------KDLNTLSVEDVMIKNPK 294
            + L G++++GDI R                             +    +VEDVM K   
Sbjct: 447 QKNLIGMVSDGDIIRYLAPKEGSVHDFIYEVLVEDEENEQDVLNERINATVEDVMEKKQI 506

Query: 295 -VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + E+     A+++L  H+   L V+D   K IGI+   D+
Sbjct: 507 YTVKEEDTFERAIRILSHHHFKKLPVLDSNNKVIGIISRGDI 548



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            TL V+D M+ N   +  D+ +   ++L  ++ I    V+D  +  IG+V   D++R+
Sbjct: 405 RTLIVKDFMVSNLISVKLDSTILELLKLFTKYRIGGAPVLDSQKNLIGMVSDGDIIRY 462



 Score = 42.6 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 23/72 (31%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                    +     DVM     I  VK       AI ILS   F  + V+D   K+ GI
Sbjct: 484 NEQDVLNERINATVEDVMEKKQ-IYTVKEEDTFERAIRILSHHHFKKLPVLDSNNKVIGI 542

Query: 267 ITEGDIFRNFHK 278
           I+ GDI  N  K
Sbjct: 543 ISRGDIDNNLMK 554


>gi|92113106|ref|YP_573034.1| cyclic nucleotide-binding domain-containing protein
           [Chromohalobacter salexigens DSM 3043]
 gi|91796196|gb|ABE58335.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Chromohalobacter salexigens DSM 3043]
          Length = 635

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 57/130 (43%), Gaps = 19/130 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-----DEG-----------QKLKGIITE 269
           +  +  +V+    + +A   + E     V V+     D+            +++ GI+T+
Sbjct: 155 ASRAPVMVESDATVQEAAQHMGEHNASSVLVLAAPQADDDSHAFTLDDGRSRRMVGILTD 214

Query: 270 GDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+  R   + L  +  V  ++   P  I  D  +  AM  + ++NI  L V+   ++ I
Sbjct: 215 HDLRNRVLAEGLPASTQVGQLIDDRPITIQSDESVYEAMLRMLRNNIHHLPVL-YRRRPI 273

Query: 328 GIVHFLDLLR 337
           G++H  D++R
Sbjct: 274 GVLHLSDIVR 283



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 29/69 (42%), Gaps = 16/69 (23%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-----DDC-----------QKA 326
             V  +  + P ++  D  +  A Q + +HN S ++V+     DD            ++ 
Sbjct: 149 TKVRKLASRAPVMVESDATVQEAAQHMGEHNASSVLVLAAPQADDDSHAFTLDDGRSRRM 208

Query: 327 IGIVHFLDL 335
           +GI+   DL
Sbjct: 209 VGILTDHDL 217


>gi|78486527|ref|YP_392452.1| diguanylate cyclase/phosphodiesterase [Thiomicrospira crunogena
           XCL-2]
 gi|78364813|gb|ABB42778.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Thiomicrospira crunogena XCL-2]
          Length = 963

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
                 + D I  LSEK  G + + +E  ++ GI T  D+ +      D+    +  VM 
Sbjct: 34  CTPDTCIKDVIGRLSEKNIGSILI-EESGEIVGIWTRTDLLKLDFSLPDILKAPIRSVMN 92

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                I +D L++ A  L  +     L+VVD  +  +G++   DL++ 
Sbjct: 93  SPVCRIHKDELISSATYLFHKKQFHHLLVVDCDEVPVGVLAESDLVQA 140



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTL 283
               +  +     +  A  +  +K+F  + VVD  +   G++ E D+ +       L+ +
Sbjct: 91  MNSPVCRIHKDELISSATYLFHKKQFHHLLVVDCDEVPVGVLAESDLVQAQSCESFLDGI 150

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           S+++++  +   I  D  L   + ++ +H +  L+V D  Q  +GIV   DL +
Sbjct: 151 SIQELLAGHLYFIQADRGLDDVLSMMSKHKVDALVVEDVDQ--LGIVSMRDLFK 202



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 57/130 (43%), Gaps = 4/130 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                 +     S        +  ++    L D ++++S+ +   + V D  Q   GI++
Sbjct: 139 QAQSCESFLDGISIQELLAGHLYFIQADRGLDDVLSMMSKHKVDALVVEDVDQ--LGIVS 196

Query: 269 EGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
             D+F+ F +  D NTL V+D+       +L+   L+   Q + QH    + V D+  K 
Sbjct: 197 MRDLFKCFAQQTDYNTLKVKDIASWPLISVLQSQSLSYVRQFMIQHKFHHIGVEDENGKL 256

Query: 327 IGIVHFLDLL 336
           + ++ F +LL
Sbjct: 257 LDLISFSELL 266



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V   M    +    DT +   +  L + NI  +++ ++  + +GI    DLL+ 
Sbjct: 21  LVVSQFMHIGLETCTPDTCIKDVIGRLSEKNIGSILI-EESGEIVGIWTRTDLLKL 75


>gi|260775142|ref|ZP_05884040.1| transcriptional regulator RpiR family [Vibrio coralliilyticus ATCC
           BAA-450]
 gi|260608843|gb|EEX35005.1| transcriptional regulator RpiR family [Vibrio coralliilyticus ATCC
           BAA-450]
          Length = 282

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 73/165 (44%), Gaps = 5/165 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKI---KAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
            + LSS + SL   ++      +++      + G++ I G+G S  +   L+  L   G 
Sbjct: 100 AKLLSSKQQSLDRTVALNDADTIQQAAGYLHLAGKIQIAGVGASSLVAKDLSYKLTKIGH 159

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                + A     +   ++ +D+++ LS+SG S E+ +I   AR     +I I+    + 
Sbjct: 160 AVHCEYDAHIQIANAAALSENDVLVALSYSGRSREVLSIAQLARSKGAKVIIISQLAPTP 219

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +  +ADI L    + E      +  T+   QL + D L IAL + 
Sbjct: 220 LDRYADIKLMTAADEE--QIRSSSITARDSQLLMTDLLFIALTQQ 262


>gi|254172327|ref|ZP_04879003.1| putative CBS domain protein [Thermococcus sp. AM4]
 gi|214034223|gb|EEB75049.1| putative CBS domain protein [Thermococcus sp. AM4]
          Length = 136

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           ++    +  A  +++E   G + VVDE   + G +T+GDI R        NT  V+++M 
Sbjct: 18  IRPDDTVKRAGEVMTEFEIGSLVVVDENDNVVGFLTKGDIIRRLVVPGLPNTTPVKEIMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K+   +  +T L   + ++ +  I  +++ ++  K +GI    DLL  
Sbjct: 78  KDLVTVPAETPLQDVLDIMAKKGIKHILI-EENGKIVGIFSITDLLEA 124



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    PL D + I+++K    + + +E  K+ GI +  D+     + L T   
Sbjct: 76  MTKDLVTVPAETPLQDVLDIMAKKGIKHILI-EENGKIVGIFSITDLLEASRRKLETAIA 134

Query: 286 ED 287
            +
Sbjct: 135 TE 136


>gi|212638338|ref|YP_002314858.1| putative transcriptional regulator [Anoxybacillus flavithermus WK1]
 gi|212559818|gb|ACJ32873.1| Predicted transcriptional regulator containing CBS domains
           [Anoxybacillus flavithermus WK1]
          Length = 436

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E       V+D+  K++GI+T  D+   + +D+    +E VM K+P  +   T +  A  
Sbjct: 220 ETNHSRFPVIDQQLKVQGIVTAKDVM-GYERDVL---IEKVMTKHPITVSGKTSVASASH 275

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I VL VVD+  +  GI+   D+L+ 
Sbjct: 276 MMVWEGIEVLPVVDEYDRLQGIISRQDVLKA 306



 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 12/90 (13%), Positives = 28/90 (31%), Gaps = 4/90 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +                   V     +  A  ++  +    + VVDE  +L+GII+ 
Sbjct: 241 AKDVMGYERDVLIEKVMTKHPITVSGKTSVASASHMMVWEGIEVLPVVDEYDRLQGIISR 300

Query: 270 GDIFRNFHKDLNTL----SVEDVMIKNPKV 295
            D+ +             +++D++      
Sbjct: 301 QDVLKALQMVQRQPQVGETIDDIVTTQFLT 330


>gi|229815160|ref|ZP_04445497.1| hypothetical protein COLINT_02206 [Collinsella intestinalis DSM
           13280]
 gi|229809390|gb|EEP45155.1| hypothetical protein COLINT_02206 [Collinsella intestinalis DSM
           13280]
          Length = 503

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 60/167 (35%), Gaps = 8/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  + +AL      S   +    P  +   +            S   
Sbjct: 51  NIPMVSAIMQSVSGVDMGVALATEGGISF-IYGSQTPESEAAMVKAVKDHKAGFVQSDST 109

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +     +   + +        + V D+G    KL GI+T  D   +  +D ++  V + M
Sbjct: 110 LTPDMTMEQVMQLKDRTGHSTMPVTDDGTPTGKLLGIVTSRDYRPS--RDDHSKLVSEFM 167

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  V  +D  L  A  L+    ++ L VVDD    +GIV   D
Sbjct: 168 TPRAELIVGDKDITLKDANDLIWDKKLNALPVVDDNDHLVGIVFRKD 214


>gi|194017525|ref|ZP_03056136.1| N-acetylmuramic acid 6-phosphate etherase (MurNAc-6-Petherase)
           [Bacillus pumilus ATCC 7061]
 gi|194010797|gb|EDW20368.1| N-acetylmuramic acid 6-phosphate etherase (MurNAc-6-Petherase)
           [Bacillus pumilus ATCC 7061]
          Length = 471

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/164 (17%), Positives = 65/164 (39%), Gaps = 2/164 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + S++ +     +     AV+ +     ++   G+G SG + +            
Sbjct: 282 TAGNSIQSIKDTASILNAEALEEAVQLLLHA-NQIHFIGVGASGIVAADAQQKFLRINYA 340

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +        +   +    ++D++  +S+SG + ++   L  A+   +  IA+T   ++ V
Sbjct: 341 ATAFTDMHIASTVIANAGKNDIVFGISFSGETLDIIQALQLAKDNGVKTIALTHPGQTSV 400

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +   D+ L+        P   A T+S + QL + D L ++L   
Sbjct: 401 SALCDVHLSTS-GSNEAPFRSAATSSRMAQLYLIDVLFLSLASH 443



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 71/193 (36%), Gaps = 24/193 (12%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L+ I  E   ++   + +   +      A E I    GR+V  G G SG +G   A    
Sbjct: 30  LQMINEEDMKVAQAVNRVLPHVKTASDFAYESISN-GGRLVYLGAGTSGRLGVMDAVECP 88

Query: 88  STGTPSFFVHAAEASHGDLGM----------------------ITRDDLIIVLSWSGSSD 125
            T + S  V     + GD                         +T  D ++ ++ SG + 
Sbjct: 89  PTYSVSPDVIVGIMAGGDAAFSHAAEDVEDSEEAGKQDLVHIHLTSKDTVVGIAASGRTP 148

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            +   L YA+      +A++   ++ ++  AD  + +   PE+   G     +A     I
Sbjct: 149 YIIGALNYAKSIGAKTVALSCNEQAKISELADCAIEVIVGPEA-ITGSTRMKAASAHKMI 207

Query: 186 GDALAIALLESRN 198
            + L+ +++  + 
Sbjct: 208 LNMLSTSVMIRQG 220


>gi|254361286|ref|ZP_04977429.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           PHL213]
 gi|153092782|gb|EDN73825.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           PHL213]
          Length = 289

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 37  GLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            L ++       L F      VE+++  K R+ + G+G SG         L   G  +  
Sbjct: 109 SLDNVIEETINLLDFNVLEKVVEELRKAK-RIFLFGVGSSGLTAEDAKHKLMRIGLQTDA 167

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V      +    ++   DL+I +S SG S+E+   L ++R      +AIT   +S V   
Sbjct: 168 VTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITHNLRSPVTEE 227

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           A+ VL                 + + QL + D +   L+++
Sbjct: 228 ANYVLINGNRQG--HMQGDSIGTKMSQLFVLDLIYTLLVKA 266


>gi|134094584|ref|YP_001099659.1| IMP dehydrogenase [Herminiimonas arsenicoxydans]
 gi|133738487|emb|CAL61532.1| Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Herminiimonas arsenicoxydans]
          Length = 486

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NIPLLSAAMDTVTEARLAIAMAQEGGIGIIHKNLTAAEQAREVAKVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D + +  +       VV EG+ + GIIT  D+     ++     V   M 
Sbjct: 97  ITIPPNTKIRDVMALSQQHGISGFPVV-EGKNVVGIITNRDLRF---ENELDAPVSSKMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E   L  A +L+ +H +  ++VV+D  +  G++   D+ + 
Sbjct: 153 PKEKLVFVSEGADLVEAKRLMNKHRLERVLVVNDAFELRGLITAKDIQKA 202


>gi|134045384|ref|YP_001096870.1| CBS domain-containing protein [Methanococcus maripaludis C5]
 gi|132663009|gb|ABO34655.1| CBS domain containing protein [Methanococcus maripaludis C5]
          Length = 279

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 62/165 (37%), Gaps = 6/165 (3%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P T  +  +     +   L     ++   F   H         +         D++ L+K
Sbjct: 41  PGTGRVEGILTNMDIVNMLGGGSKYNLVKFKHNH----NMLSAINEPVKEIMTDNVVLIK 96

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               L + I +  EK+ G + VVD+   L   I E D+ +     ++  L V+D M +N 
Sbjct: 97  ENAELNEVIDLFVEKKIGGMPVVDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENV 156

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   L    + + ++    L +V +  K +GI+   D +R 
Sbjct: 157 VSATPGERLKDVARTMLRNGFRRLPIVSEE-KLVGIITSTDFVRL 200



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------LN 281
            G  L D    +    F  + +V E  KL GIIT  D  R F  D             + 
Sbjct: 161 PGERLKDVARTMLRNGFRRLPIVSEE-KLVGIITSTDFVRLFGSDWAFNHMKTGNIREIT 219

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + ++D+M  +   +  +  L  A++ + + NI VL VVD  +K +G++   D+++
Sbjct: 220 NVRMQDIMKTDIVSVKSEIKLIDAVKKMNELNIGVLPVVD-GEKLVGLITEKDIVK 274



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+ ++ ++    + VVD G  +++GI+T  DI                   
Sbjct: 15  VYPTTKIIEALVMMDKENIRRICVVDPGTGRVEGILTNMDIVNMLGGGSKYNLVKFKHNH 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+++M  N  +I E+  L   + L  +  I  + VVD     I  ++  D+
Sbjct: 75  NMLSAINEPVKEIMTDNVVLIKENAELNEVIDLFVEKKIGGMPVVDKSGVLITTINERDV 134

Query: 336 LRF 338
           +++
Sbjct: 135 IKY 137



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     I  VK    LIDA+  ++E   G + VVD G+K
Sbjct: 204 DWAFNHMKTGNIREITNVRMQDIMKTDIVSVKSEIKLIDAVKKMNELNIGVLPVVD-GEK 262

Query: 263 LKGIITEGDIFRNFHK 278
           L G+ITE DI +  +K
Sbjct: 263 LVGLITEKDIVKCIYK 278


>gi|50842619|ref|YP_055846.1| putative transcriptional regulator [Propionibacterium acnes
           KPA171202]
 gi|282853908|ref|ZP_06263245.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           J139]
 gi|50840221|gb|AAT82888.1| putative transcriptional regulator [Propionibacterium acnes
           KPA171202]
 gi|282583361|gb|EFB88741.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           J139]
          Length = 290

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 85  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 140

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 141 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 200

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 201 EALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 258

Query: 189 LAIALLE 195
           L   + +
Sbjct: 259 LFARVAQ 265


>gi|89902609|ref|YP_525080.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89347346|gb|ABD71549.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 153

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 54/117 (46%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNF---HKD 279
              S+ +     PL  A  ++ E   GC+ VVDE      + G++T+ DI         D
Sbjct: 11  CTRSVTIAFKQTPLNGAARLMRENHVGCLVVVDEVGGKRIVVGVLTDRDIVTAVVASDLD 70

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +TL VEDVM  +     ED  L   M  +R+  +  + VV +  + +G+V   D+L
Sbjct: 71  PSTLQVEDVMSTDLVTAREDDSLIDLMHSMRRKGVRRVPVVGEQDELMGVVTLDDVL 127



 Score = 42.6 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLRF 338
            L+  ++  ++  +  + T L  A +L+R++++  L+VVD+       +G++   D++  
Sbjct: 4   RLTTGEICTRSVTIAFKQTPLNGAARLMRENHVGCLVVVDEVGGKRIVVGVLTDRDIVTA 63


>gi|87127463|gb|ABD21977.1| SIS domain protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201891|gb|ABD29701.1| SIS domain protein [Staphylococcus aureus subsp. aureus NCTC 8325]
          Length = 167

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 9/162 (5%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           + +F     KI   +  + + G G+SG + +  A  L   G  +  V  +         I
Sbjct: 8   ADEFSTFASKILHAE-HIFVAGKGRSGFVANSFAMRLNQLGKQAHVVGESTTP-----AI 61

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             +D+ +++S SGS++ L+ +   A+     ++ IT+   S +   A   + LP   +  
Sbjct: 62  KSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGNLAGTNIVLPAGTKYD 121

Query: 170 PHGLA-PTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
             G A P  S   Q +    D++ + L+   N +E      H
Sbjct: 122 EQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNH 163


>gi|77360377|ref|YP_339952.1| hypothetical protein PSHAa1434 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76875288|emb|CAI86509.1| conserved protein of unknown function [Pseudoalteromonas
           haloplanktis TAC125]
          Length = 631

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 55/147 (37%), Gaps = 16/147 (10%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD------ 258
            ++               ++H             + D   ++SE+    V V D      
Sbjct: 137 AIVEQADSNDLTTAKVKSLIHRDVVTV--LTTSTVQDVAKLMSEEAVSSVLVTDINKPVN 194

Query: 259 -----EGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                +  ++ GIIT+ D+  +     L      + +M  N  ++  +  +  A+  + +
Sbjct: 195 DDPEEDDGQVVGIITDRDLRNKVVAPGLSFDTQAQHIMSTNLVILDANAYVFEAVLAMLR 254

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++  L VV   ++ IG++   D+LR+
Sbjct: 255 DSLHHLPVV-QKRRPIGVISLSDILRY 280


>gi|301154709|emb|CBW14172.1| unnamed protein product [Haemophilus parainfluenzae T3T1]
          Length = 288

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 43/187 (22%), Positives = 74/187 (39%), Gaps = 12/187 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +T   +SL     ++ A+ +++ E   L   E         Q   AV+ I+    RV +
Sbjct: 92  DITDSDNSLNIAHKLKSAINNVMDETINLLDFE---------QLEEAVKAIQQA-NRVFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T+ D+ I LS SG S E   
Sbjct: 142 FGVGTSGITAEDAKNKLMRIGVQVDATGNNHFMYMQASLLTKKDVAIGLSHSGYSQETTH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A+      IAIT   +S +  +AD+VL    +            + I QL + D +
Sbjct: 202 TMKIAKENGAKTIAITHSLRSPITEYADLVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLES 196
              L+++
Sbjct: 260 YALLVQA 266


>gi|269125821|ref|YP_003299191.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
 gi|268310779|gb|ACY97153.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
          Length = 139

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +  +     L  A  ++ E   G + +  +  +L+GIIT+ DI         D + 
Sbjct: 8   MHAGVQCIPAHETLDRAAQMMRELDVGALPICGDDDRLQGIITDRDIVVKCIAAGHDPSK 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  ++    P+ I  D  ++ A++ + +H I  L V+ + ++ +G++   DL + 
Sbjct: 68  VTASELAQGTPQWIDADADISEAVRQMTRHRIKRLPVI-ENKRLVGMISEADLAQK 122



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               DVM    + I     L  A Q++R+ ++  L +  D  +  GI+   D++
Sbjct: 2   TKARDVMHAGVQCIPAHETLDRAAQMMRELDVGALPICGDDDRLQGIITDRDIV 55



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 14/81 (17%), Positives = 33/81 (40%), Gaps = 1/81 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G      +    +  +   +     + +A+  ++  R   + V+ E ++L G+I+E D
Sbjct: 60  AAGHDPSKVTASELAQGTPQWIDADADISEAVRQMTRHRIKRLPVI-ENKRLVGMISEAD 118

Query: 272 IFRNFHKDLNTLSVEDVMIKN 292
           + +   +D     VE V   +
Sbjct: 119 LAQKLPEDQLAEFVEKVFTPH 139


>gi|284989355|ref|YP_003407909.1| putative signal transduction protein with CBS domains
           [Geodermatophilus obscurus DSM 43160]
 gi|284062600|gb|ADB73538.1| putative signal transduction protein with CBS domains
           [Geodermatophilus obscurus DSM 43160]
          Length = 143

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G  +  V     +  A+ +L+E   G + V  +G+ + GI++E D+ R  H+    
Sbjct: 7   LRRKGAGVATVDAAASVRTALALLAEHGVGALVVSADGRSVDGIVSERDVVRALHERGAG 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L    V  VM       +    +    + + QH +  + VV +    +GIV   D+++  
Sbjct: 67  LLADPVSSVMTAQVHTCVPGAGVEELARTMTQHRVRHVPVV-EGGALLGIVSIGDVVKAR 125

Query: 340 I 340
           +
Sbjct: 126 L 126


>gi|160916083|ref|ZP_02078290.1| hypothetical protein EUBDOL_02110 [Eubacterium dolichum DSM 3991]
 gi|158431807|gb|EDP10096.1| hypothetical protein EUBDOL_02110 [Eubacterium dolichum DSM 3991]
          Length = 503

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 12/178 (6%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCAS 221
           K  +S      P  SAIMQ   G+ +A AL       F      V      +  +    +
Sbjct: 42  KGEKSAIELNIPMVSAIMQSVSGERMACALAREGGISFIYGSQSVEDEAAMVRRVKATKA 101

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHK 278
             ++S  +   ++    L + + +        +AV ++     KL GIIT  D      +
Sbjct: 102 GFVYSDSN---IRPDATLQEVLALKERNGHATMAVTEDGTANGKLVGIITSRDYR--VTR 156

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                 VED M          E   L+ A  ++ +H ++ L ++DD Q  +  V   D
Sbjct: 157 MDLNTKVEDFMTPFDKLICAKEGCSLSEANDIIWEHKLNQLPIIDDQQNLVAFVFRKD 214


>gi|88810763|ref|ZP_01126020.1| putative mannose-1-phosphate guanyltransferase [Nitrococcus mobilis
           Nb-231]
 gi|88792393|gb|EAR23503.1| putative mannose-1-phosphate guanyltransferase [Nitrococcus mobilis
           Nb-231]
          Length = 334

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 41/91 (45%), Gaps = 1/91 (1%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILE 298
           ++ I  + E       V D+  +L G++T+GDI R   + +        +M   P  + +
Sbjct: 1   METIRRIDEAGLQVALVADDAHRLLGVVTDGDIRRAILRGVELQAPTSTIMNPKPHTLPQ 60

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                  +  +R++++  + VV+   K +G+
Sbjct: 61  HKPRREILAYMRRYSLRQVPVVNVDGKLVGL 91


>gi|300855346|ref|YP_003780330.1| hypothetical protein CLJU_c21680 [Clostridium ljungdahlii DSM
           13528]
 gi|300435461|gb|ADK15228.1| conserved hypothetical protein [Clostridium ljungdahlii DSM 13528]
          Length = 125

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               I  +K    L  A+ ++ +       VVDE  KL G+I + DI+R        +T 
Sbjct: 6   MHSDIVKLKREDSLHKALDVMYDHNINGAPVVDENGKLTGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+ VM K+      D  +    + LR+ NI  + V+DD     GI+   D++
Sbjct: 66  PVDWVMAKDVVTAKSDEDILAVAKRLREKNIVSIPVIDDENTVKGIISIEDIM 118



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++M  +   +  +  L  A+ ++  HNI+   VVD+  K  G++   D+ RF
Sbjct: 1   MIGEIMHSDIVKLKREDSLHKALDVMYDHNINGAPVVDENGKLTGMIVKADIYRF 55


>gi|289168243|ref|YP_003446512.1| hypothetical protein smi_1410 [Streptococcus mitis B6]
 gi|288907810|emb|CBJ22650.1| conserved hypothetical protein [Streptococcus mitis B6]
          Length = 218

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|317153694|ref|YP_004121742.1| Nucleotidyl transferase [Desulfovibrio aespoeensis Aspo-2]
 gi|316943945|gb|ADU62996.1| Nucleotidyl transferase [Desulfovibrio aespoeensis Aspo-2]
          Length = 355

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 43/109 (39%), Gaps = 1/109 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVED 287
              ++ +   + DA+  L+        V  E   L G+IT+GDI R             +
Sbjct: 5   RKAVIPLTATVRDAVEALTLSSVQIALVARENGHLDGVITDGDIRRGLLAGKTLKSPARE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM  N     E     V +  +R+ +   + ++D     +G+   +D++
Sbjct: 65  VMETNFFTARESDDPAVLLATMRERDFRQVPLLDADGCLVGLRTLMDMI 113


>gi|229583394|ref|YP_002841793.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284999136|ref|YP_003420904.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
 gi|228014110|gb|ACP49871.1| putative signal-transduction protein with CBS domains [Sulfolobus
           islandicus Y.N.15.51]
 gi|284447032|gb|ADB88534.1| CBS domain containing protein [Sulfolobus islandicus L.D.8.5]
          Length = 133

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 54/120 (45%), Gaps = 3/120 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKD 279
             + +      +     L +A+ ++ ++      V+D   G  + GI+T   I R+  K 
Sbjct: 4   KDVFNNTRPIKITRHTSLSEALELMDKQGIRFALVIDNSKGDDVIGIVTRSIILRSLAKG 63

Query: 280 LN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    V  VMIKN   I  +  L      + ++NI+ L+ +++  K IG+V   D+L  
Sbjct: 64  VSQNEPVSKVMIKNVITINGEEDLIDTFMFMVRNNITHLLAINETGKIIGVVSLRDVLTA 123


>gi|15922514|ref|NP_378183.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           tokodaii str. 7]
 gi|15623304|dbj|BAB67292.1| 592aa long hypothetical glucosamine--fructose-6-phosphate
           aminotransferase [Sulfolobus tokodaii str. 7]
          Length = 592

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 54/283 (19%), Positives = 107/283 (37%), Gaps = 39/283 (13%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++ I    R +     SL  ++       +E+IK  + RV++ G G S H G   +  L 
Sbjct: 262 IKEIHESPRAVKETIDSLMSDIDL-VEKVIEEIKNAE-RVIVIGAGTSYHAGLYFSIELN 319

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  S  V A+E  +       + DL+  +S SG + ++   +   R     +I++T+ 
Sbjct: 320 RLGINSLPVIASEYYNVRS---KKGDLVFAISQSGETIDVLQGIRMMRNSGAKIISLTNV 376

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +S +A  +D  + +   PE    G+A T +   Q      LA  L       + +   +
Sbjct: 377 IESAIARESDYKIYMRAGPE---IGVAATKTFTTQ------LASILFILSVLKKENLKKM 427

Query: 208 HPG---------------GKLGTLFVCASDVMHSGDSIPL---------VKIGCPLIDAI 243
                              K+G      S++ + G  + L         +K    +    
Sbjct: 428 EKAPDIVRDTISQVEGLTKKIGEELAKKSNIYYLGRGLSLPLAMEGALKIKEIAYVHAEA 487

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               E + G +++V++G  +  II +G++      +L  +   
Sbjct: 488 YPAGESKHGPISLVEKGFPVV-IINDGELTELLQNNLMEMKAR 529


>gi|327400007|ref|YP_004340846.1| CBS domain-containing protein [Archaeoglobus veneficus SNP6]
 gi|327315515|gb|AEA46131.1| CBS domain containing protein [Archaeoglobus veneficus SNP6]
          Length = 260

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 50/104 (48%), Gaps = 4/104 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + +AI ++ +       VVD+  K+ G I+  D+     KD NT  + D+M K  
Sbjct: 17  SPDNTVDEAIELIQKTGHDGFPVVDDSGKVIGYISSRDL---LKKDPNT-KIGDIMSKQL 72

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V  E   L  A +++ +   S L VVDD  + +GI+   D++R
Sbjct: 73  YVAREYMDLRDAARVMFRTGHSKLPVVDDDGRLLGIISNADVIR 116



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L V D M KN   +  D  +  A++L+++       VVDD  K IG +   DLL+ 
Sbjct: 2   KLRVGDYMTKNVITLSPDNTVDEAIELIQKTGHDGFPVVDDSGKVIGYISSRDLLKK 58



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 22/49 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               + + +    L DA  ++       + VVD+  +L GII+  D+ R
Sbjct: 68  MSKQLYVAREYMDLRDAARVMFRTGHSKLPVVDDDGRLLGIISNADVIR 116


>gi|307705243|ref|ZP_07642110.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
 gi|307621192|gb|EFO00262.1| acetoin utilization protein acuB [Streptococcus mitis SK597]
          Length = 218

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|295681503|ref|YP_003610077.1| XRE family transcriptional regulator [Burkholderia sp. CCGE1002]
 gi|295441398|gb|ADG20566.1| putative transcriptional regulator, XRE family [Burkholderia sp.
           CCGE1002]
          Length = 229

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 52/131 (39%), Gaps = 26/131 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           +     + DA  +L++ +   + V+D+   + GI++EGD+ R                  
Sbjct: 14  IAPDSSVYDAAKLLADSKISGMPVLDDTGSVIGIVSEGDLLRRVETGTETPRRSWLAQFI 73

Query: 281 -------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                         ++ V DVM      + E   LT   +LL + +I  L V+    K +
Sbjct: 74  APTRQLAVEYLKERSIRVRDVMSAPAVTVDESAPLTAVAELLGRKHIKRLPVL-RDGKLV 132

Query: 328 GIVHFLDLLRF 338
           GIV   +L+R 
Sbjct: 133 GIVSRANLVRA 143



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 27/55 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   D+M      I  D+ +  A +LL    IS + V+DD    IGIV   DLLR
Sbjct: 1   MQASDIMTTQVVSIAPDSSVYDAAKLLADSKISGMPVLDDTGSVIGIVSEGDLLR 55


>gi|323497808|ref|ZP_08102822.1| RpiR family transcriptional regulator [Vibrio sinaloensis DSM
           21326]
 gi|323317155|gb|EGA70152.1| RpiR family transcriptional regulator [Vibrio sinaloensis DSM
           21326]
          Length = 282

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/158 (24%), Positives = 65/158 (41%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            SLE S+    S     A   +     ++ + G+G S  +   L+  L   G      H 
Sbjct: 108 QSLERSIALNDSGNLEHATRLLHLA-NKIQLAGVGASSLVAKDLSYKLMKIGHAVHCEHD 166

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A     +   +  +D++I LS+SG S E+  +   A+     +I I+    + +  +ADI
Sbjct: 167 AHIQIANASALNENDVLIALSYSGRSREILRVAQIAKGRKAKIITISQLAPTPLDKYADI 226

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            L    + E      +  T+   QL I D L IAL + 
Sbjct: 227 KLMTAADEE--HIRSSSITARDSQLLITDLLFIALTQQ 262


>gi|320529827|ref|ZP_08030904.1| transcriptional regulator, RpiR family [Selenomonas artemidis
           F0399]
 gi|320137845|gb|EFW29750.1| transcriptional regulator, RpiR family [Selenomonas artemidis
           F0399]
          Length = 284

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +L+         AVE +   K R+ + G+G S ++   + +     G          
Sbjct: 111 LQDTLKLLDYAAVERAVETLIGAK-RIAVYGVGNSANVCRDIETRFLRFGMAIRAYSDTH 169

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  ++   D++I +S +G + E+   +  A+     +IA+TS  +S +A  A+IVL
Sbjct: 170 MQITSAALLGAGDVVIAVSHTGDTVEILESVKLAQSRGAVIIAVTSHARSRLARVAEIVL 229


>gi|314923301|gb|EFS87132.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL001PA1]
 gi|314966649|gb|EFT10748.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL082PA2]
 gi|314981379|gb|EFT25473.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL110PA3]
 gi|315092045|gb|EFT64021.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL110PA4]
 gi|315092829|gb|EFT64805.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL060PA1]
 gi|315103651|gb|EFT75627.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL050PA2]
 gi|315105700|gb|EFT77676.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL030PA1]
 gi|327327474|gb|EGE69250.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL103PA1]
          Length = 293

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|313201040|ref|YP_004039698.1| inosine-5'-monophosphate dehydrogenase [Methylovorus sp. MP688]
 gi|312440356|gb|ADQ84462.1| inosine-5'-monophosphate dehydrogenase [Methylovorus sp. MP688]
          Length = 486

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H    + T     S V        +
Sbjct: 40  NIPLVSAAMDTVTEAPLAIALAQEGG-----MGIIHKNMNIQTQAAHVSRVKRFESGVVN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D + +  + +   + VVD G K+ GI+T  D+   F  +L+   + ++
Sbjct: 95  DPVTIQPHMTVRDVLALTRQHKISGLPVVD-GTKVVGIVTNRDLR--FETNLDQ-PIVNI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E       M LL +H +  ++VV+D     G++   D+ +
Sbjct: 151 MTPRERLVTVPEGAPREAVMALLHKHRLERVLVVNDAFDLKGLITVKDIQK 201


>gi|297154764|gb|ADI04476.1| hypothetical protein SBI_01355 [Streptomyces bingchenggensis BCW-1]
          Length = 224

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 19/132 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              ++       P  + + +L+E     V VVD      G+++E D+ R           
Sbjct: 10  MTRNVVRAPRELPFKEIVELLAENDVTAVPVVDGSGHPIGVVSEADLLRKSSGQADPSGR 69

Query: 275 ----NFHKDLNTLS----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
               +        +     E++M         +  +  A +L+    +  L VVD+  + 
Sbjct: 70  VPIPHLEAWERAKTEGTRAEELMSAPAVCARPEWSVVEAARLMAVQGVKRLPVVDETDRL 129

Query: 327 IGIVHFLDLLRF 338
           +GI+   DLLR 
Sbjct: 130 LGIISRADLLRI 141



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +V ++M +N      +      ++LL +++++ + VVD     IG+V   DLLR 
Sbjct: 1   MQHRTVGELMTRNVVRAPRELPFKEIVELLAENDVTAVPVVDGSGHPIGVVSEADLLRK 59



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 25/45 (55%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +    +++A  +++ +    + VVDE  +L GII+  D+ R F +
Sbjct: 100 RPEWSVVEAARLMAVQGVKRLPVVDETDRLLGIISRADLLRIFLR 144


>gi|283778259|ref|YP_003369014.1| signal transduction protein [Pirellula staleyi DSM 6068]
 gi|283436712|gb|ADB15154.1| putative signal transduction protein with CBS domains [Pirellula
           staleyi DSM 6068]
          Length = 306

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 51/124 (41%), Gaps = 9/124 (7%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G +G   +    VM        V     + D    L+   F  + V+    +L G+I++ 
Sbjct: 132 GLVGDHAMKVQHVMSQRILS--VTPHVLVNDLKQSLARAGFRHLLVL-RSAELVGVISDR 188

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     +     S   +M ++P  +  +T +T A+ ++    IS L VVD+     GI+
Sbjct: 189 DLHTRSGR-----SAGQIMTRSPITVTSETSVTQALSIMLSKRISSLPVVDN-GVVRGIL 242

Query: 331 HFLD 334
              D
Sbjct: 243 TTTD 246


>gi|258620166|ref|ZP_05715205.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587524|gb|EEW12234.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 629

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L      A+    +   + F       +   L                  
Sbjct: 93  SFAVTAIEDTLLYCIPEAIFHRLHEEFDSFADFVEVEQSARLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D         +   + GIITE D+ 
Sbjct: 153 KQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAQGIDITQAVSQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|224475717|ref|YP_002633323.1| putative sugar phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420324|emb|CAL27138.1| putative sugar phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 181

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 72/167 (43%), Gaps = 7/167 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+++L    + +      +++  K  +   G G+SG++ +  A  L   G  S  + 
Sbjct: 10  LDELKNTLGHVKNEEVEQFENEVRDAKN-IFTAGKGRSGYVANSFAMRLNQLGKASHVIG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A         I + DL IV+S SGS++ L+ +   A+     ++ IT++  S +   AD
Sbjct: 69  GATTP-----SIHKGDLFIVISGSGSTEHLRLLADKAKGEDAKVVLITTKPDSKIGEIAD 123

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQLAIGDALAIALLESRNFSEND 203
            V+ LP   +    G   P  S   Q A     A+ L     F+ ++
Sbjct: 124 TVIELPAGTKYDAEGSEQPLGSLFEQSAQIFLDAVVLDLMEIFNIDE 170


>gi|289428335|ref|ZP_06430022.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           J165]
 gi|295130698|ref|YP_003581361.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           SK137]
 gi|289158484|gb|EFD06700.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           J165]
 gi|291375593|gb|ADD99447.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           SK137]
 gi|332675542|gb|AEE72358.1| HTH-type transcriptional regulator [Propionibacterium acnes 266]
          Length = 290

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 85  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARTVDADELEAVASAI----SIAPRTA 140

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 141 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 200

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 201 EALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 258

Query: 189 LAIALLE 195
           L   + +
Sbjct: 259 LFARVAQ 265


>gi|167760563|ref|ZP_02432690.1| hypothetical protein CLOSCI_02937 [Clostridium scindens ATCC 35704]
 gi|167661784|gb|EDS05914.1| hypothetical protein CLOSCI_02937 [Clostridium scindens ATCC 35704]
          Length = 511

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 59/161 (36%), Gaps = 10/161 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ    D LAIAL +    S    Y   P      +                
Sbjct: 65  NIPMVSAIMQSVSDDRLAIALAQEGGLSF--IYGSQPIESQAEMIEKVKRYRAGFVVSDS 122

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            V     L D + +  +     +AV ++     KL GI+T  D      +      V+D 
Sbjct: 123 NVSAEMTLQDVLRLTEQTGHSTIAVTEDGSPNGKLLGIVTNKDYR--VSRMTPDTRVKDF 180

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           M K  +     E+T L  A  ++  H I+ L +V+  Q+ +
Sbjct: 181 MTKLDDLVYAQEETTLKEANDIIWDHKINCLPLVNKNQELV 221


>gi|221066860|ref|ZP_03542965.1| inosine-5'-monophosphate dehydrogenase [Comamonas testosteroni
           KF-1]
 gi|220711883|gb|EED67251.1| inosine-5'-monophosphate dehydrogenase [Comamonas testosteroni
           KF-1]
          Length = 491

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 66/171 (38%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  E+      V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLQLSEERGISGFPVCD-GGKVIGIVTSRDLRFETRYDV---KVSQIMT 152

Query: 291 KNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              K+I     + T    A  LL +H +  ++VV+D  +  G++   D+ +
Sbjct: 153 PREKLITVNEKDGTSPAEAKALLNKHKLERILVVNDAFELKGLITVKDITK 203


>gi|51246911|ref|YP_066795.1| chloride channel protein [Desulfotalea psychrophila LSv54]
 gi|50877948|emb|CAG37788.1| related to chloride channel protein [Desulfotalea psychrophila
           LSv54]
          Length = 695

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 8/140 (5%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG+   +           +    V    P+ + + +  E       VV +  K+ GI+T 
Sbjct: 461 GGRDMDIMQGVRVSEVMRNRPVTVHKNQPISELLALFQETNLLGFPVVADDNKVWGIVTL 520

Query: 270 GDIFRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQ 324
            D+ +   K   +   L V D+  ++P     D  +  A+Q +   +++ L VV  D   
Sbjct: 521 QDMHKAESKPDFSSKGLVVADIATEDPITAFSDEPIWTAIQKMSPRDLARLPVVSRDGSG 580

Query: 325 KAIGIVHFLDLLRF---GII 341
           +  G++   D+LR    G++
Sbjct: 581 QLCGVISRSDILRAYDVGVM 600


>gi|313895224|ref|ZP_07828781.1| transcriptional regulator, RpiR family [Selenomonas sp. oral taxon
           137 str. F0430]
 gi|312976119|gb|EFR41577.1| transcriptional regulator, RpiR family [Selenomonas sp. oral taxon
           137 str. F0430]
          Length = 284

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +L+         AVE +   K R+ + G+G S ++   + +     G          
Sbjct: 111 LQDTLKLLDYAAVERAVETLIGAK-RIAVYGVGNSANVCRDIETRFLRFGMAIRAYSDTH 169

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  ++   D++I +S +G + E+   +  A+     +IA+TS  +S +A  A+IVL
Sbjct: 170 MQITSAALLGAGDVVIAVSHTGDTVEILESVKLAQSRGAVIIAVTSHARSRLARVAEIVL 229


>gi|307708907|ref|ZP_07645367.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
 gi|307620243|gb|EFN99359.1| acetoin utilization protein acuB [Streptococcus mitis SK564]
          Length = 218

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|296109672|ref|YP_003616621.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295434486|gb|ADG13657.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 276

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + +AI +   +  G V +VD+  K+  +I+E D+ + F  D++ + V+D M KN 
Sbjct: 96  NENADVDEAIDLFLNRGVGGVPIVDKEDKVISLISERDVIKYFLDDIDGV-VKDYMEKNV 154

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   L    + + ++    L VV    + +G++   D ++ 
Sbjct: 155 IYATPGERLKDVARTMLRNKFRRLPVVSK-GRLVGMITATDFIKL 198



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 49/115 (42%), Gaps = 15/115 (13%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------LN 281
            G  L D    +   +F  + VV    +L G+IT  D  +    D             + 
Sbjct: 159 PGERLKDVARTMLRNKFRRLPVV-SKGRLVGMITATDFIKLLGSDWAFNHMKTGNVREIT 217

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +E++M ++     ED  L    +++ + NI  + VVD  +K +GI+   D++
Sbjct: 218 NVRMEEIMRRDVITAREDDNLKKIAEIMIKENIGAIPVVD-GEKLVGIITEKDIV 271



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 19/117 (16%)

Query: 240 IDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIF-----------------RNFHKDLN 281
            + +T ++EK F  + + + G K L GI+T  DI                  RNF+  +N
Sbjct: 22  RETLTTMNEKGFRRLPIANPGNKKLVGIVTAMDIVDFIGGGDKYNLIREKHNRNFYSAIN 81

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              ++++M K    + E+  +  A+ L     +  + +VD   K I ++   D++++
Sbjct: 82  E-PIKEIMTKEVITLNENADVDEAIDLFLNRGVGGVPIVDKEDKVISLISERDVIKY 137



 Score = 41.8 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 29/76 (38%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     +   +    L     I+ ++  G + VVD G+K
Sbjct: 202 DWAFNHMKTGNVREITNVRMEEIMRRDVITAREDDNLKKIAEIMIKENIGAIPVVD-GEK 260

Query: 263 LKGIITEGDIFRNFHK 278
           L GIITE DI  + +K
Sbjct: 261 LVGIITEKDIVSSLNK 276


>gi|237653739|ref|YP_002890053.1| hypothetical protein Tmz1t_3078 [Thauera sp. MZ1T]
 gi|237624986|gb|ACR01676.1| CBS domain containing protein [Thauera sp. MZ1T]
          Length = 149

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           +    P+ +A+ I++E+  G + VV    ++ G++T   + +   +   D  +L VE VM
Sbjct: 17  IGPNRPIAEAVEIMNEQDVGSL-VVFSRGEMVGMLTFRQVLQAVQQGGADWQSLQVEAVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ P+V   D  +    +L+ +H+   L V+D     +G+V F D+ + 
Sbjct: 76  LREPRVAAPDMEMDELRRLMVEHHQRYLPVMD-GNTLLGVVSFHDVAKA 123



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 7/44 (15%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  +  +  A++++ + ++  L+V     + +G++ F  +L+ 
Sbjct: 16  TIGPNRPIAEAVEIMNEQDVGSLVVF-SRGEMVGMLTFRQVLQA 58


>gi|151944202|gb|EDN62491.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 523

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V ++G+   KL G+IT  DI   F +D N++ V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTEDGKRNAKLVGVITSRDI--QFVED-NSVLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|241663255|ref|YP_002981615.1| CBS domain-containing protein [Ralstonia pickettii 12D]
 gi|309782513|ref|ZP_07677237.1| CBS domain protein [Ralstonia sp. 5_7_47FAA]
 gi|240865282|gb|ACS62943.1| CBS domain containing protein [Ralstonia pickettii 12D]
 gi|308918850|gb|EFP64523.1| CBS domain protein [Ralstonia sp. 5_7_47FAA]
          Length = 151

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 218 VCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +  SD++H  G+++  V     L  A+  ++EK  G + VV E  +L G++T  +I +  
Sbjct: 1   MKVSDILHVKGNTLYTVAPETKLQVAVQTMAEKDIGSL-VVMEYGELVGMLTFREIIKVV 59

Query: 277 HKDL----NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            K+     +  ++  VM  +P     +T +    +++ +H++  L V+D  +  +G++ F
Sbjct: 60  AKNHGSVGDGTTIRKVMDDHPVTCTPETEVNEVRRIMLEHHVRYLPVLD-SRTLMGVISF 118

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 119 YDVAKA 124


>gi|59713533|ref|YP_206308.1| cyclic nucleotide binding protein/CBS domain-containing proteins
           [Vibrio fischeri ES114]
 gi|59481781|gb|AAW87420.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio fischeri
           ES114]
          Length = 619

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 57/132 (43%), Gaps = 5/132 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDEGQKLKGIIT 268
             +         +   +  +I +      +      + +     C  +VDE + L G+IT
Sbjct: 143 NQQHAHQNYLRPNSDIADSTIAIASPTDTIQAVAHQMRNVVGVSCAFIVDENKHLIGMIT 202

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           + D+ +      K+++   +  +M +    + ED L+  A+QL+ +HNI  + V++  ++
Sbjct: 203 DKDMTKRVVAQAKNVHD-PISSIMTQEIHTVYEDDLVMSAVQLMMKHNIQNIPVLNHQKQ 261

Query: 326 AIGIVHFLDLLR 337
             G +    L++
Sbjct: 262 VTGFITPQHLIQ 273


>gi|302392563|ref|YP_003828383.1| signal transduction protein with CBS domains [Acetohalobium
           arabaticum DSM 5501]
 gi|302204640|gb|ADL13318.1| putative signal transduction protein with CBS domains
           [Acetohalobium arabaticum DSM 5501]
          Length = 306

 Score = 75.7 bits (185), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 20/106 (18%), Positives = 48/106 (45%), Gaps = 1/106 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L +A  I+  ++   + +VD+ ++L GII+  DI +    +     +  +M  + 
Sbjct: 30  HPDNKLKNAKEIMRLRKISGIPIVDQNKRLLGIISIDDIIQGLEYNKLDNKINSLMSTDL 89

Query: 294 KVI-LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  ++  +   +   +++    L V+D+  K +GI+   D+ R 
Sbjct: 90  ITVNNQNNSIGDVLFKFKKYKFGRLPVIDNNNKLVGIITPGDITRK 135



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 31/56 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L++ D+M  +   +  D  L  A +++R   IS + +VD  ++ +GI+   D+++
Sbjct: 15  DLTINDIMTTDVITLHPDNKLKNAKEIMRLRKISGIPIVDQNKRLLGIISIDDIIQ 70



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 21/77 (27%), Positives = 31/77 (40%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G          + + S D I +      + D +    + +FG + V+D   KL GIIT G
Sbjct: 71  GLEYNKLDNKINSLMSTDLITVNNQNNSIGDVLFKFKKYKFGRLPVIDNNNKLVGIITPG 130

Query: 271 DIFRNFHKDLNTLSVED 287
           DI R     +     ED
Sbjct: 131 DITRKLLSKVKEKISED 147


>gi|255320017|ref|ZP_05361213.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262380523|ref|ZP_06073677.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SH164]
 gi|255302885|gb|EET82106.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SK82]
 gi|262297969|gb|EEY85884.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter
           radioresistens SH164]
          Length = 488

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIALQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I        V VV +  ++ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITQANNISGVPVV-KDGQVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL+QH I  ++VVD+     G++   D  + 
Sbjct: 152 MTPQERLVTVREGESKENIQALLQQHRIEKVLVVDEQHALKGLITVTDFRKA 203


>gi|156307511|ref|XP_001617646.1| hypothetical protein NEMVEDRAFT_v1g225916 [Nematostella vectensis]
 gi|156194993|gb|EDO25546.1| predicted protein [Nematostella vectensis]
          Length = 349

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 41/106 (38%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              +V     +   I ++  +      V DE   L G +T+GD+ R   K++     V +
Sbjct: 5   RKVVVTPTASIKQVIEVIEAQSLRVALVADENMTLIGTVTDGDVRRGLLKNIALDAPVNE 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +M + P      T     ++++ + +I  + +     K  G+    
Sbjct: 65  IMNRRPTTADWGTSRRELIEIMERLDILSIPLT-KEGKLAGLETLQ 109


>gi|151567820|pdb|2P9M|A Chain A, Crystal Structure Of Conserved Hypothetical Protein Mj0922
           From Methanocaldococcus Jannaschii Dsm 2661
 gi|151567821|pdb|2P9M|B Chain B, Crystal Structure Of Conserved Hypothetical Protein Mj0922
           From Methanocaldococcus Jannaschii Dsm 2661
 gi|151567822|pdb|2P9M|C Chain C, Crystal Structure Of Conserved Hypothetical Protein Mj0922
           From Methanocaldococcus Jannaschii Dsm 2661
 gi|151567823|pdb|2P9M|D Chain D, Crystal Structure Of Conserved Hypothetical Protein Mj0922
           From Methanocaldococcus Jannaschii Dsm 2661
          Length = 138

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 53/106 (50%), Gaps = 7/106 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVI 296
           +++A     + +   + V+D+  K+ GI+T  DI  N  +D  TL  ++ DV  K+   I
Sbjct: 27  VVEAFEKXLKYKISSLPVIDDENKVIGIVTTTDIGYNLIRDKYTLETTIGDVXTKDVITI 86

Query: 297 LEDTLLTVAMQL--LRQHN---ISVLMVVDDCQKAIGIVHFLDLLR 337
            ED  +  A++   +       I+ L VVD   K +GI+   D++R
Sbjct: 87  HEDASILEAIKKXDISGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 27/56 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + V+DV  KN         +  A +   ++ IS L V+DD  K IGIV   D+
Sbjct: 5   LKNIKVKDVXTKNVITAKRHEGVVEAFEKXLKYKISSLPVIDDENKVIGIVTTTDI 60



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 5/51 (9%)

Query: 233 VKIGCPLIDAITI--LSEKR---FGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +     +++AI    +S K+      + VVD+  KL GII++GDI R   K
Sbjct: 86  IHEDASILEAIKKXDISGKKEEIINQLPVVDKNNKLVGIISDGDIIRTISK 136


>gi|152986795|ref|YP_001345731.1| hypothetical protein PSPA7_0335 [Pseudomonas aeruginosa PA7]
 gi|150961953|gb|ABR83978.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 144

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/119 (16%), Positives = 52/119 (43%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     ++DA+ +++EK  G + V++   ++ G+++E D  R      +   
Sbjct: 11  KQNQQVYTIGPDEMVLDALRLMAEKNIGALLVLN-HGEVVGVVSERDYARKMVLKGRSSI 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +M      +     +   M L+   ++  L VV++  + +G++   DL++  I
Sbjct: 70  GTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHLRHLPVVEE-GRLLGLLSIGDLVKAAI 127


>gi|327330370|gb|EGE72119.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL097PA1]
          Length = 293

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + GIG SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGIGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|304315353|ref|YP_003850500.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588812|gb|ADL59187.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 278

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 4/124 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           G       +    +    +  P+ V I     +A  ++ +K+ G + V+ EG++L GIIT
Sbjct: 61  GPAWKRRPIDKISIRRVMNENPISVDINATPREAADLMLKKKIGSLLVM-EGEELAGIIT 119

Query: 269 EGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + D+ R F  +      VED+M ++ K +  +  L   + ++ ++ IS  +VV       
Sbjct: 120 KRDLLRFFKDRCAGRWKVEDLMTRDVKTVTANHTLAHVIDVMEENGISR-VVVTGNGAVE 178

Query: 328 GIVH 331
           GI+ 
Sbjct: 179 GIIT 182



 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 10/126 (7%)

Query: 222 DVMHSGDSIPLVKIGCP-LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
           +V         V      +  A  ++       V VVD   K  GI+TE DI R    D 
Sbjct: 2   NVGSIMTDEVFVMEDTQQVAYARNLMLRHGISRVVVVDSEGKPAGIVTETDITRKLRIDG 61

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  ++ +S+  VM +NP  +  +     A  L+ +  I  L+V+ + ++  GI+  
Sbjct: 62  PAWKRRPIDKISIRRVMNENPISVDINATPREAADLMLKKKIGSLLVM-EGEELAGIITK 120

Query: 333 LDLLRF 338
            DLLRF
Sbjct: 121 RDLLRF 126



 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/163 (17%), Positives = 56/163 (34%), Gaps = 31/163 (19%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D          G       D+M     +  V     L   I ++ E     V VV 
Sbjct: 118 ITKRDLLRFFKDRCAGR--WKVEDLM--TRDVKTVTANHTLAHVIDVMEENGISRV-VVT 172

Query: 259 EGQKLKGIITEGDIF-------------------------RNFHKDLNTLSVEDVMIKNP 293
               ++GIIT  ++                          +   + +  L+  D+M ++ 
Sbjct: 173 GNGAVEGIITSENLSFATFEDPERGIPVERVYFISRASEEKRRARTIAMLTAGDIMTEDV 232

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +      + A  ++  + IS L VV+D +  +GI+   D++
Sbjct: 233 ITVEPSADASEAASVMLDNGISGLPVVEDDE-LVGIITKTDII 274


>gi|159035700|ref|YP_001534953.1| CBS domain-containing protein [Salinispora arenicola CNS-205]
 gi|157914535|gb|ABV95962.1| CBS domain containing protein [Salinispora arenicola CNS-205]
          Length = 141

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMI 290
                L +A  ++ E   G   V  EG  L G++T+ DI  R   +  D    +++ ++ 
Sbjct: 18  PTETTLDEAARVMREADIG-DVVATEGATLVGMLTDRDIVVRAVAERSDPARTTIDAIIT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +I ++  +  A  L+R+  +  ++V D+ +K +GIV   DL
Sbjct: 77  REVVMIDQNCTVGEAAALMRERGVRRVLVCDNDRKLVGIVSLGDL 121



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 14/69 (20%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
              + ++   C + +A  ++ E+    V V D  +KL GI++ GD+   F        + 
Sbjct: 76  TREVVMIDQNCTVGEAAALMRERGVRRVLVCDNDRKLVGIVSLGDLATRFDPQSALGQIS 135

Query: 287 DVMIKNPKV 295
           +   + P  
Sbjct: 136 E---RTPTT 141



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM K    +  +T L  A +++R+ +I   +V  +    +G++   D++
Sbjct: 6   VRDVMTKQVIYLPTETTLDEAARVMREADIGD-VVATEGATLVGMLTDRDIV 56


>gi|42524290|ref|NP_969670.1| putative inosine-5'-monophosphate dehydrogenase protein
           [Bdellovibrio bacteriovorus HD100]
 gi|39576499|emb|CAE80663.1| putative inosine-5'-monophosphate dehydrogenase protein
           [Bdellovibrio bacteriovorus HD100]
          Length = 137

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 57/121 (47%), Gaps = 6/121 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNF 276
           +   DVMH       +     + +A  +++   +GC+ + +E  ++ G+IT+ DI  R  
Sbjct: 1   MKVKDVMHERAEY--INRDRTVREAAEMMARGDYGCLPI-EENDRMIGMITDRDITLRVV 57

Query: 277 HK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            K  D N   V + M K  +   E+  L    +++    I  + V++D ++ +G++   D
Sbjct: 58  AKGLDPNVTKVSECMSKGIEYCFEEDNLLDVGEMMASQKIRRMPVINDKKRLVGMLSLGD 117

Query: 335 L 335
           +
Sbjct: 118 I 118



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+DVM +  + I  D  +  A +++ + +   L + ++  + IG++   D+ 
Sbjct: 1   MKVKDVMHERAEYINRDRTVREAAEMMARGDYGCLPI-EENDRMIGMITDRDIT 53


>gi|322376938|ref|ZP_08051431.1| CBS domain protein [Streptococcus sp. M334]
 gi|321282745|gb|EFX59752.1| CBS domain protein [Streptococcus sp. M334]
          Length = 218

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|313772276|gb|EFS38242.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL074PA1]
 gi|313807633|gb|EFS46120.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL087PA2]
 gi|313810141|gb|EFS47862.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL083PA1]
 gi|313818670|gb|EFS56384.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL046PA2]
 gi|313820440|gb|EFS58154.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL036PA1]
 gi|313822754|gb|EFS60468.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL036PA2]
 gi|313825312|gb|EFS63026.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL063PA1]
 gi|313830471|gb|EFS68185.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL007PA1]
 gi|313833506|gb|EFS71220.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL056PA1]
 gi|314925050|gb|EFS88881.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL036PA3]
 gi|314960415|gb|EFT04517.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL002PA2]
 gi|314973471|gb|EFT17567.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL053PA1]
 gi|314976152|gb|EFT20247.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL045PA1]
 gi|314978589|gb|EFT22683.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL072PA2]
 gi|314983827|gb|EFT27919.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL005PA1]
 gi|314988007|gb|EFT32098.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL005PA2]
 gi|314989818|gb|EFT33909.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL005PA3]
 gi|315080525|gb|EFT52501.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL078PA1]
 gi|315084196|gb|EFT56172.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL027PA2]
 gi|315085540|gb|EFT57516.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL002PA3]
 gi|315088405|gb|EFT60381.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL072PA1]
 gi|315096018|gb|EFT67994.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL038PA1]
 gi|327326298|gb|EGE68088.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL096PA2]
 gi|327331826|gb|EGE73563.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL096PA3]
 gi|327443604|gb|EGE90258.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL013PA2]
 gi|327445808|gb|EGE92462.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL043PA2]
 gi|327448211|gb|EGE94865.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL043PA1]
 gi|328753359|gb|EGF66975.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL020PA1]
 gi|328760742|gb|EGF74308.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL099PA1]
          Length = 293

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARTVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGATTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|307702036|ref|ZP_07639044.1| AcuB family protein [Streptococcus mitis NCTC 12261]
 gi|307616681|gb|EFN95870.1| AcuB family protein [Streptococcus mitis NCTC 12261]
          Length = 218

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|258624473|ref|ZP_05719420.1| CBS domain-containing protein [Vibrio mimicus VM603]
 gi|258583320|gb|EEW08122.1| CBS domain-containing protein [Vibrio mimicus VM603]
          Length = 629

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L      A+    +   + F       +   L                  
Sbjct: 93  SFAVTAIEDTLLYCIPEAIFHRLHEEFDSFADFVEVEQSARLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D         +   + GIITE D+ 
Sbjct: 153 KQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAQGIDITQAVSQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|225619253|ref|YP_002720479.1| GGDEF domain-containing protein [Brachyspira hyodysenteriae WA1]
 gi|225214072|gb|ACN82806.1| GGDEF domain protein [Brachyspira hyodysenteriae WA1]
          Length = 331

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 61/118 (51%), Gaps = 8/118 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
             + I ++K    L++  +++S+     +AV+++  K+ GII   ++  N  K++N    
Sbjct: 1   MENKIEVIKKDSTLVEVASLVSKSSNKILAVINDSDKIVGIINYNELLVNILKNINKKDS 60

Query: 282 ----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 ++   M KN  +   +  ++VA  +++++ I  L++V++    IGI++  D+
Sbjct: 61  KNIFNKAISTFMNKNLVIAHPEDDISVAFDIMKENKIDYLVIVNNDHYPIGIINIYDI 118


>gi|150020523|ref|YP_001305877.1| signal transduction protein [Thermosipho melanesiensis BI429]
 gi|149793044|gb|ABR30492.1| putative signal transduction protein with CBS domains [Thermosipho
           melanesiensis BI429]
          Length = 307

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/127 (26%), Positives = 57/127 (44%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K+ ++F            +  V     ++    IL  KR   V VVD  +K+ GII+  D
Sbjct: 6   KVQSIFSHMKVSEFMNSDVIYVLPNRTIMQVKEILRLKRISGVPVVDSQKKVIGIISIED 65

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I R+  K+     VE+ M +    +  D  L   M+L  ++      VVD+ ++ +GIV 
Sbjct: 66  IIRSIEKNQLDSLVEEQMTRRVITVELDATLRDVMELFEKYGYGRFPVVDEKKRLVGIVT 125

Query: 332 FLDLLRF 338
             D+L+ 
Sbjct: 126 KNDILKA 132



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                +  V++   L D + +  +  +G   VVDE ++L GI+T+ DI +     L
Sbjct: 82  QMTRRVITVELDATLRDVMELFEKYGYGRFPVVDEKKRLVGIVTKNDILKAVAMKL 137



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           DI        + + V + M  +   +L +  +    ++LR   IS + VVD  +K 
Sbjct: 2   DILEKVQSIFSHMKVSEFMNSDVIYVLPNRTIMQVKEILRLKRISGVPVVDSQKKV 57


>gi|307706956|ref|ZP_07643755.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
 gi|307617670|gb|EFN96838.1| acetoin utilization protein acuB [Streptococcus mitis SK321]
          Length = 218

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|302388920|ref|YP_003824741.1| transcriptional regulator, RpiR family [Thermosediminibacter oceani
           DSM 16646]
 gi|302199548|gb|ADL07118.1| transcriptional regulator, RpiR family [Thermosediminibacter oceani
           DSM 16646]
          Length = 280

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 55/163 (33%), Gaps = 3/163 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  + ++E+++      +   A E +   K ++   G+G SG +                
Sbjct: 101 RNNMLAVENTMDILDRNEVRKAAEVLLRAK-KIDFYGVGASGIVAQDAMHKFMRINKACT 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                         ++ +D+ + +S+SG + +    L  A+      I IT    S +  
Sbjct: 160 AYTDTHMQLTSAANLSPEDVAVGISYSGQTVDTVDALKLAKNAGATTICITKFGHSPITK 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +DI L                 S + QL + D L   +   +
Sbjct: 220 VSDIKLF--VTSSEALFRSGAMASRMAQLNVIDILFTIVACRK 260


>gi|262171675|ref|ZP_06039353.1| Signal transduction protein [Vibrio mimicus MB-451]
 gi|261892751|gb|EEY38737.1| Signal transduction protein [Vibrio mimicus MB-451]
          Length = 629

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L      A+    +   + F       +   L                  
Sbjct: 93  SFAVTAIEDTLLYCIPEAIFHRLHEEFDSFADFVEVEQSARLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D         +   + GIITE D+ 
Sbjct: 153 KQLLTRPAPTIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAQGIDITQAVSQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|222481413|ref|YP_002567649.1| CBS domain containing protein [Halorubrum lacusprofundi ATCC 49239]
 gi|222454789|gb|ACM59052.1| CBS domain containing protein [Halorubrum lacusprofundi ATCC 49239]
          Length = 411

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 2/126 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
               +    ++ V      +P V     + +   ++       + V+D+  ++ GI+T  
Sbjct: 51  QLASSSNQPSAKVGSRVQHVPTVNRTADVREVARLMIGSGAKTLPVLDDD-RVVGIVTGD 109

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            I       L+ ++V D   +       DT +  A+  LR+  I+ L VVDD  +A+G+V
Sbjct: 110 SILEAVQSFLSAVTVADAYTEKLISAAPDTTIGKALNTLREGRIAHLPVVDD-GEAVGMV 168

Query: 331 HFLDLL 336
              D++
Sbjct: 169 SLYDIV 174



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 45/138 (32%), Gaps = 35/138 (25%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------------------- 272
               +  A+  L E R   + VVD+  +  G+++  DI                      
Sbjct: 137 PDTTIGKALNTLREGRIAHLPVVDD-GEAVGMVSLYDIVDFTTRGGTKSQGGSPGNFGGR 195

Query: 273 -----------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV- 320
                             +  L V ++M      +     L   ++ + +  IS L+V+ 
Sbjct: 196 HGGERHGGLGAREGDSDRMLDLPVRNLMSDVVVTVRRSAPLDEVVETMFEREISSLVVLG 255

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D   + IG+V   D+L  
Sbjct: 256 DQSSEPIGVVTKTDVLEA 273


>gi|148643162|ref|YP_001273675.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
 gi|222445395|ref|ZP_03607910.1| hypothetical protein METSMIALI_01029 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350044|ref|ZP_05975461.1| inosine monophosphate dehydrogenase/GMP reductase
           [Methanobrevibacter smithii DSM 2374]
 gi|148552179|gb|ABQ87307.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
 gi|222434960|gb|EEE42125.1| hypothetical protein METSMIALI_01029 [Methanobrevibacter smithii
           DSM 2375]
 gi|288860830|gb|EFC93128.1| inosine monophosphate dehydrogenase/GMP reductase
           [Methanobrevibacter smithii DSM 2374]
          Length = 266

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +   ++  V       + I ++ E       VV E  KL G++T  DI     KD     
Sbjct: 11  YMTKNVVTVSPQTTTEEVIKLMKESDHNSYPVV-ENNKLVGMVTSFDI---VVKDWADH- 65

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V ++M     V  E+  +  A +++ +  IS + V+++  + +GI+   D++R
Sbjct: 66  VSEIMSTKLVVANENLSINDASRVMFRRGISRMPVINENGEIVGIITNTDMVR 118



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M KN   +   T     ++L+++ + +   VV +  K +G+V   D++
Sbjct: 8   VKDYMTKNVVTVSPQTTTEEVIKLMKESDHNSYPVV-ENNKLVGMVTSFDIV 58



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 22/57 (38%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                       + +      + DA  ++  +    + V++E  ++ GIIT  D+ R
Sbjct: 62  WADHVSEIMSTKLVVANENLSINDASRVMFRRGISRMPVINENGEIVGIITNTDMVR 118


>gi|322369198|ref|ZP_08043763.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
 gi|320550930|gb|EFW92579.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
          Length = 284

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 53/133 (39%), Gaps = 4/133 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             +      GT  + A    +    +  V     + +    ++E        V +G++++
Sbjct: 14  SRVRIASDGGTEGIKAKVKEYMTRDVATVSPDATVEEVARRIAESDGHNGFPVCDGRRVE 73

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G ++  D+     K+     +  VM +   V   D ++  A +++ +  I  L VVDD  
Sbjct: 74  GFVSARDLLLADEKE----PIFKVMTQELIVAHPDMVVNDAARVILRSGIQKLPVVDDAG 129

Query: 325 KAIGIVHFLDLLR 337
             +GI+   D +R
Sbjct: 130 NLVGIITNTDFIR 142



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +      + DA  ++       + VVD+   L GIIT  D  R+  + +    V
Sbjct: 94  MTQELIVAHPDMVVNDAARVILRSGIQKLPVVDDAGNLVGIITNTDFIRSQIERVTPEKV 153

Query: 286 EDVM 289
             +M
Sbjct: 154 GKLM 157


>gi|229088874|ref|ZP_04220339.1| hypothetical protein bcere0022_48810 [Bacillus cereus Rock3-44]
 gi|228694449|gb|EEL47960.1| hypothetical protein bcere0022_48810 [Bacillus cereus Rock3-44]
          Length = 287

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 62/190 (32%), Gaps = 7/190 (3%)

Query: 6   SHFKSVTRKG-HSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           SH     +KG + +  N T+      I     + +      L   +       VE ++  
Sbjct: 75  SHISQPEKKGFYDIEPNETIAEIKEKIVSNSVQAIQETAIYLDEGI---LDQIVEAMRNA 131

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
              +   G+G S  +   +       G        A      L   T++ +   +S SG 
Sbjct: 132 D-VIYAYGLGASWLVAEDILHKWLRLGKIVSANQDAHIMATALAASTKNCVFFSISNSGE 190

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++E+  ++  A+   I  I ++    + +    D+ L             A T+S   Q 
Sbjct: 191 TEEVLQLVEIAKASGIQTIGLSRFGNNRLTNKVDMSLQ-HVRAPEAKFRSAATSSLFAQF 249

Query: 184 AIGDALAIAL 193
              D +  A 
Sbjct: 250 LTIDIIFYAY 259


>gi|220702516|pdb|3FHM|A Chain A, Crystal Structure Of The Cbs-Domain Containing Protein
           Atu1752 From Agrobacterium Tumefaciens
 gi|220702517|pdb|3FHM|B Chain B, Crystal Structure Of The Cbs-Domain Containing Protein
           Atu1752 From Agrobacterium Tumefaciens
 gi|220702518|pdb|3FHM|C Chain C, Crystal Structure Of The Cbs-Domain Containing Protein
           Atu1752 From Agrobacterium Tumefaciens
 gi|220702519|pdb|3FHM|D Chain D, Crystal Structure Of The Cbs-Domain Containing Protein
           Atu1752 From Agrobacterium Tumefaciens
          Length = 165

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 4/130 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G        +   G  +  V     + +A   L   + G V V D    + GI TE D+ 
Sbjct: 21  GMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLV 80

Query: 274 RNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +            SV   M KN      ++     M+++       + V ++  +  GI+
Sbjct: 81  KAVAGQGAASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPV-EENGRLAGII 139

Query: 331 HFLDLLRFGI 340
              D+++  I
Sbjct: 140 SIGDVVKARI 149


>gi|332687457|emb|CBY88872.1| inosine monophosphate dehydrogenase [Saccharomyces bayanus]
 gi|332687460|emb|CBY88874.1| inosine monophosphate dehydrogenase [Saccharomyces bayanus]
          Length = 523

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|307352906|ref|YP_003893957.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
 gi|307156139|gb|ADN35519.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
          Length = 194

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 51/134 (38%), Gaps = 5/134 (3%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +      +    V          +   + +   +  A   +     G   V+ +    KG
Sbjct: 1   MSEKKYDIIRFEVGVPVKEAMRYNPTTIGVEATVAKAAEKMCRDEVGSCIVL-QNNLPKG 59

Query: 266 IITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           I+TE DI  +   KD   + + V ++M      I  D  +  A  ++ ++ +  L VV +
Sbjct: 60  IVTEEDINCKVVAKDKKPSEVRVSEIMSTPLITIDVDKTVGDATHMMVKNKVRRLPVV-E 118

Query: 323 CQKAIGIVHFLDLL 336
             K +G+V   D+L
Sbjct: 119 GDKVVGLVTVRDIL 132


>gi|294633386|ref|ZP_06711945.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831167|gb|EFF89517.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 228

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 44/119 (36%), Gaps = 17/119 (14%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----------------FRNFHK 278
           G    + +  + +     + V+DE  ++ G+++E D+                       
Sbjct: 11  GAEFKEIVRTMRQWGVSAMPVLDEQGRVIGVVSEADLLHKEEFRDTDARPSGPGRSAGAV 70

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +  ++       +  D  L  A +L+ +H +  L VVD   +  GIV   DLL+
Sbjct: 71  KARAATARELATVPAVTVPADATLARAARLMARHGVKRLPVVDQEGRLKGIVSRSDLLK 129



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 22/97 (22%), Positives = 39/97 (40%), Gaps = 2/97 (2%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRF 251
           LL    F + D     PG   G +   A+          + V     L  A  +++    
Sbjct: 47  LLHKEEFRDTDARPSGPGRSAGAVKARAATARELATVPAVTVPADATLARAARLMARHGV 106

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             + VVD+  +LKGI++  D+ + F +    +  E+V
Sbjct: 107 KRLPVVDQEGRLKGIVSRSDLLKVFLRPDEDI-AEEV 142


>gi|291458847|ref|ZP_06598237.1| transcriptional regulator [Oribacterium sp. oral taxon 078 str.
           F0262]
 gi|291418101|gb|EFE91820.1| transcriptional regulator [Oribacterium sp. oral taxon 078 str.
           F0262]
          Length = 282

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 68/171 (39%), Gaps = 6/171 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++     A + +      +    S L  +   Q   A++ I   K RV+  G+G S   
Sbjct: 92  LEDDISDLAKKVLTENISAIQETYSLLDLK---QVTLAMDAISRAK-RVIFFGVGASMLT 147

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K  +         +    A        M+  +D  ++ S+SG++ ++  I   A+   
Sbjct: 148 AMKAMNKFLRVEPKVYCSEVANVQLMMASMMGPEDAAVIFSYSGATKDIVEIARLAKGSG 207

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             +IAIT   KS +  +AD++L           G   T++ I QL + D +
Sbjct: 208 AKVIAITRFTKSELTEYADLILLSGANEGGLQSG--STSAEISQLFLVDIM 256


>gi|316933327|ref|YP_004108309.1| CBS domain-containing protein [Rhodopseudomonas palustris DX-1]
 gi|315601041|gb|ADU43576.1| CBS domain containing protein [Rhodopseudomonas palustris DX-1]
          Length = 142

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVE 286
           I  V+    L  AI  L+E+R G V V+  G +L+GI++E DI R             V 
Sbjct: 14  IHSVEADARLASAIKTLAERRIGAVLVM-HGTRLEGILSERDIVRVLADRGPAALDQPVG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VM ++     +D  +   M+ +       L V++   + +G++   D+++
Sbjct: 73  AVMTRDVFTCRQDDNVGEIMERMTAGKFRHLPVMEHD-RVVGLISIGDIVK 122


>gi|256274043|gb|EEU08956.1| Imd2p [Saccharomyces cerevisiae JAY291]
          Length = 523

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|255526644|ref|ZP_05393550.1| putative signal transduction protein with CBS domains [Clostridium
           carboxidivorans P7]
 gi|296186103|ref|ZP_06854508.1| CBS domain pair [Clostridium carboxidivorans P7]
 gi|255509677|gb|EET86011.1| putative signal transduction protein with CBS domains [Clostridium
           carboxidivorans P7]
 gi|296049371|gb|EFG88800.1| CBS domain pair [Clostridium carboxidivorans P7]
          Length = 128

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               I  +K    L  A+  ++  +     VVDE  KL GII + DI+R        +T 
Sbjct: 6   MHSDIVKLKTEDDLKKALETINANKVNGAPVVDENDKLVGIIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+ VM KN     ED  +      LR+++I  + +VD      GIV   D++
Sbjct: 66  PVDWVMTKNVVTASEDEDIVEVAARLRENDIIAIPIVD-GGVLKGIVTIEDIV 117



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++++M  +   +  +  L  A++ +  + ++   VVD+  K +GI+   D+ RF
Sbjct: 1   MIKEIMHSDIVKLKTEDDLKKALETINANKVNGAPVVDENDKLVGIIVKADIYRF 55


>gi|237745831|ref|ZP_04576311.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           HOxBLS]
 gi|229377182|gb|EEO27273.1| inosine-5'-monophosphate dehydrogenase [Oxalobacter formigenes
           HOxBLS]
          Length = 487

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 65/169 (38%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M      +LAIA+           +   L    ++  +    + V+      
Sbjct: 40  NIPLLSAAMDTVTESSLAIAMARQGGIGIIHKNMTALEQAREVARVKRFEAGVV---TDP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D I +  +       VV EG+ + GIIT  D+   F ++L    V D M 
Sbjct: 97  ITIPPTMRIRDVIALSRQHGISGFPVV-EGRSVVGIITNRDLR--FEEEL-DAPVRDKMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E   L  A +L+ +  +  ++VV+D  +  G++   D+ +
Sbjct: 153 PREKLVYVKEGASLEEAKRLMNRSRLERVLVVNDAFELRGLITVKDIQK 201


>gi|45358814|ref|NP_988371.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|45047680|emb|CAF30807.1| Conserved Hypothetical Protein with 2 CBS domains [Methanococcus
           maripaludis S2]
          Length = 186

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
               +  V +     D   IL EK  GC+ V+++  K  GIITE D+      RN     
Sbjct: 11  MSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSRNLKS-- 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + VE++       I   + L  A + +   N+  L V+D  +  +GIV   D+ + 
Sbjct: 69  KEVIVEEISSSKLIAIAPKSTLMDAARKMDTENVKRLPVIDGDE-LLGIVTVSDITKL 125



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            LSV + M      +  DT       +L++  I  L+V++D  K +GI+   DL   G++
Sbjct: 4   ELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLA-LGVV 62


>gi|154149618|ref|YP_001403236.1| signal transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|153998170|gb|ABS54593.1| putative signal transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 158

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 36/140 (25%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
             +  PL DA+ IL E   G + V+D G+ L GIITE DI                    
Sbjct: 14  CTVNTPLRDAVAILREHHIGGLPVLD-GESLAGIITESDILAQLATHKLSDDLWLPSPLE 72

Query: 278 -------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              +++  L V+ VM         D  +  A  L+ +  I+ L 
Sbjct: 73  IIEVPIREYINWEKTKDALRNIGDLPVKKVMTHPVITATGDMDIEDAAALMLKERIARLP 132

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V D  +K IGI+   D+++ 
Sbjct: 133 VTD-GKKLIGILTRADIVQA 151



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M KNP     +T L  A+ +LR+H+I  L V+D  +   GI+   D+L
Sbjct: 3   VSEAMTKNPLTCTVNTPLRDAVAILREHHIGGLPVLD-GESLAGIITESDIL 53


>gi|6322012|ref|NP_012088.1| Imd2p [Saccharomyces cerevisiae S288c]
 gi|729848|sp|P38697|IMDH2_YEAST RecName: Full=Inosine-5'-monophosphate dehydrogenase IMD2;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|458916|gb|AAB69728.1| Yhr216wp [Saccharomyces cerevisiae]
 gi|259146131|emb|CAY79390.1| Imd2p [Saccharomyces cerevisiae EC1118]
 gi|285810128|tpg|DAA06915.1| TPA: Imd2p [Saccharomyces cerevisiae S288c]
 gi|323334874|gb|EGA76220.1| Imd2p [Saccharomyces cerevisiae Vin13]
          Length = 523

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|219853223|ref|YP_002467655.1| CBS domain containing membrane protein [Methanosphaerula palustris
           E1-9c]
 gi|219547482|gb|ACL17932.1| CBS domain containing membrane protein [Methanosphaerula palustris
           E1-9c]
          Length = 277

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 10/124 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + +++    +  A  ++   R   + VV     L GIIT+ DI             
Sbjct: 7   MSAPVYVIEPSENVARARNLMFRHRISRLLVV-SNDILIGIITKKDIAYRLRQSEPSWRR 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + V  +MI +P  I  DT +    +L+    IS L VV +    IGIV   DL+R
Sbjct: 66  RPIDQIPVSVLMIADPITIAPDTTIRDVARLMVNEGISSLPVV-EDGTLIGIVTKSDLMR 124

Query: 338 FGII 341
             ++
Sbjct: 125 SALV 128



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/182 (14%), Positives = 64/182 (35%), Gaps = 7/182 (3%)

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF-SEND--FYVLHPG 210
            HA  +++ P         +A   + + +  I   L ++        ++ D  + +    
Sbjct: 1   MHASEIMSAPVYVIEPSENVARARNLMFRHRISRLLVVSNDILIGIITKKDIAYRLRQSE 60

Query: 211 GKLGTL-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
                         +        +     + D   ++  +    + VV E   L GI+T+
Sbjct: 61  PSWRRRPIDQIPVSVLMIADPITIAPDTTIRDVARLMVNEGISSLPVV-EDGTLIGIVTK 119

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+ R+        +V D+M ++   +     L   + L+ + N   ++VV++     GI
Sbjct: 120 SDLMRSALVGRIHGAVGDLM-EDATTVSRYHSLDHVVNLISERN-DKVVVVNNDGSLAGI 177

Query: 330 VH 331
           + 
Sbjct: 178 IT 179



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 57/138 (41%), Gaps = 28/138 (20%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE----------GDIF--- 273
            +    V     L   + ++SE R   V VV+    L GIITE          GD+    
Sbjct: 139 MEDATTVSRYHSLDHVVNLISE-RNDKVVVVNNDGSLAGIITESNLAFFEYPAGDVLDKD 197

Query: 274 -----------RNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                      R  ++ +  ++   EDVM    + I  D L+  A+  +R+  I+ L+V 
Sbjct: 198 VTMLRREEPAGRKAYRHVRDVTFIAEDVMSSPVETIRADNLVGEAVAWMRERAINSLVVT 257

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D+ +   GI+   D+++ 
Sbjct: 258 DNNE-LRGILKRDDIIQE 274



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++M     VI     +  A  L+ +H IS L+VV +    IGI+   D+
Sbjct: 3   ASEIMSAPVYVIEPSENVARARNLMFRHRISRLLVVSND-ILIGIITKKDI 52


>gi|294084892|ref|YP_003551652.1| CBS domain-containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
 gi|292664467|gb|ADE39568.1| CBS domain containing protein [Candidatus Puniceispirillum marinum
           IMCC1322]
          Length = 140

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 50/110 (45%), Gaps = 3/110 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVED 287
              V     L   + +L +   G V V D+  ++ GI++E DI R+  K   L  +  +D
Sbjct: 13  CVTVNADSALETVVDMLVKWGIGTVVVADQNMQVLGILSERDIIRHLSKGKTLEGMKAQD 72

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M      + +    +  M L+ ++ I  + +    +K +GIV   D+++
Sbjct: 73  LMTAKVITVDQQVTSSELMHLMTKNRIRHVPIT-KDKKLVGIVSIGDVVK 121


>gi|163749381|ref|ZP_02156629.1| acetoin utilization protein AcuB, putative [Shewanella benthica
           KT99]
 gi|161330790|gb|EDQ01717.1| acetoin utilization protein AcuB, putative [Shewanella benthica
           KT99]
          Length = 140

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/125 (26%), Positives = 53/125 (42%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               I  +++   L  A  I     F  + V+ E  KL+GI++E D  R    ++  +  
Sbjct: 13  MTTRIVTIEMDDRLTVAKEIFDNAPFHHLLVI-EHDKLQGILSERDYLRTLSPNIGNINE 71

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                         VM +NP  I  +  +  A +LL +H+I  L V+D   K  GI+ + 
Sbjct: 72  TERDSETLQRRAHQVMTRNPITISPNQTIRQASELLLKHDIGSLPVLDK-GKLTGIITWK 130

Query: 334 DLLRF 338
           DLL  
Sbjct: 131 DLLTA 135



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +  +M      I  D  LTVA ++        L+V++   K  GI+   D LR
Sbjct: 6   DIRISKIMTTRIVTIEMDDRLTVAKEIFDNAPFHHLLVIEHD-KLQGILSERDYLR 60


>gi|301793913|emb|CBW36309.1| conserved hypothetical protein [Streptococcus pneumoniae INV104]
 gi|332204763|gb|EGJ18828.1| CBS domain pair family protein [Streptococcus pneumoniae GA47901]
          Length = 218

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|291568905|dbj|BAI91177.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 1608

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 20/125 (16%)

Query: 234 KIGCPLIDAITILSE------------KRFGCVAVVDEGQKLKGIITEGDIFRNFH--KD 279
               PL+  I+++S              R  CV  V +  KL G+ITE D+ R     + 
Sbjct: 25  SPETPLMGVISMISPQSKSDSDRETQPHRKSCVLAV-KKGKLVGVITERDLVRLATQYRS 83

Query: 280 LNTLSVEDVMIKNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLD 334
            + L++  VM ++     I     +  A+ L+RQH I  L V+    + +G++      +
Sbjct: 84  FDHLTLAAVMTRDLVTLSIEPHQDIFTAITLMRQHQIRHLPVLSKTGELVGLISTQTLRE 143

Query: 335 LLRFG 339
            L+ G
Sbjct: 144 CLQPG 148



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFR--NFHKDLNTLSVE 286
               ++    +++E R  CV + +            GI+TE DI +      + + +   
Sbjct: 169 PNASILHLAQLMAEYRVSCVVIAEPKIGDSFLCHPVGIVTERDIVKCSALDLNFDQVMAA 228

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D+M      +     L VA + ++Q  +  L+V D  Q+ +GI+    LL+
Sbjct: 229 DIMSSPLWCLHPTENLWVAHEQMQQRGVRRLVVCDQQQQLVGILTQTSLLQ 279



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMI 290
           ++    +  AIT++ + +   + V+ +  +L G+I+   +       DL  L  V + M 
Sbjct: 102 IEPHQDIFTAITLMRQHQIRHLPVLSKTGELVGLISTQTLRECLQPGDLFKLRQVAEAMT 161

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC------QKAIGIVHFLDLLR 337
           ++      +  +    QL+ ++ +S +++ +           +GIV   D+++
Sbjct: 162 RDVLHATPNASILHLAQLMAEYRVSCVVIAEPKIGDSFLCHPVGIVTERDIVK 214


>gi|157413777|ref|YP_001484643.1| nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9215]
 gi|157388352|gb|ABV51057.1| Nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9215]
          Length = 352

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 3/97 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     L  A+ IL+  + G   +++   KL G +T+GDI R      N    V DVM K
Sbjct: 12  VNENADLRKALEILTSTQVGIALIINHKYKLMGTLTDGDIRRGLLNGFNLESKVSDVMNK 71

Query: 292 NPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKA 326
           N   I E   T + +A++   +  +  L V+++    
Sbjct: 72  NYTFIYEKEVTDIAIALKKFSKKGVRHLPVLNNEGIL 108


>gi|149007633|ref|ZP_01831250.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
           SP18-BS74]
 gi|307127695|ref|YP_003879726.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
 gi|147760788|gb|EDK67759.1| hypothetical protein CGSSp18BS74_04056 [Streptococcus pneumoniae
           SP18-BS74]
 gi|306484757|gb|ADM91626.1| AcuB family protein [Streptococcus pneumoniae 670-6B]
 gi|332077170|gb|EGI87632.1| CBS domain pair family protein [Streptococcus pneumoniae GA17545]
          Length = 218

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|146303549|ref|YP_001190865.1| signal transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701799|gb|ABP94941.1| putative signal transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 269

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLN 281
           +    +  +     L +A+  + E     + VV    K+ G++T  D+            
Sbjct: 134 YMSSPVVTIDPLAKLSEAVEKMVESNLSRL-VVFTPGKVLGVVTTTDLLYMAAALKYRDL 192

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V DVM  N  V+  +  +  A +L+    I  + V+D   K  GIV   D++R 
Sbjct: 193 KIEVRDVMSPNVIVVNGNEDMANAAKLMASRKIKGIPVMDKDGKLGGIVTTTDVVRA 249



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 54/139 (38%), Gaps = 2/139 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D                          +  V       DA  I+ +K+   +AV D
Sbjct: 44  ITQKDIVKFVYQMGEDRPMENVMLSEVMRKDVICVSPNIDPFDAAQIMIDKKQPLLAVCD 103

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           + +K  GII + D+   +   +  L  V+D M      I     L+ A++ + + N+S L
Sbjct: 104 DHEKALGIIIKSDLSNFYASQVRGLQKVKDYMSSPVVTIDPLAKLSEAVEKMVESNLSRL 163

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +V     K +G+V   DLL
Sbjct: 164 VVFTP-GKVLGVVTTTDLL 181



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 5/81 (6%)

Query: 255 AVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            V+DE     G IT+ DI +        + +  + + +VM K+   +  +     A Q++
Sbjct: 32  IVIDERGVPVGTITQKDIVKFVYQMGEDRPMENVMLSEVMRKDVICVSPNIDPFDAAQIM 91

Query: 310 RQHNISVLMVVDDCQKAIGIV 330
                 +L V DD +KA+GI+
Sbjct: 92  IDKKQPLLAVCDDHEKALGII 112



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 26/52 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              ++ +V     + +A  +++ ++   + V+D+  KL GI+T  D+ R   
Sbjct: 200 MSPNVIVVNGNEDMANAAKLMASRKIKGIPVMDKDGKLGGIVTTTDVVRAMM 251


>gi|91773830|ref|YP_566522.1| hexulose-6-phosphate isomerase [Methanococcoides burtonii DSM 6242]
 gi|91712845|gb|ABE52772.1| 6-phospho-3-hexuloisomerase [Methanococcoides burtonii DSM 6242]
          Length = 202

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 64/183 (34%), Gaps = 20/183 (10%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            LES  +          +  I      V + G G+SG +G   A  L   G  S+ V  +
Sbjct: 22  HLESVAEDLDKESIRNMISTILEADS-VFVMGAGRSGLVGKAFAMRLMHLGLKSYVVGES 80

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    +  +D+++ +S SG +  +  +    +     LI +TS   S +   +D+ 
Sbjct: 81  TTP-----AVHPEDVVVTISGSGETKSISNLGKITKDIGAKLITVTSNPNSTLGNLSDVA 135

Query: 160 LTLPKEPESCPHGLAP--------------TTSAIMQLAIGDALAIALLESRNFSENDFY 205
           + +    +    G                 T+  I  L   DA+   ++     SE+D  
Sbjct: 136 MEIKGRTKDDTGGYLERHMRGEYSLLTPLGTSFEISSLVFLDAVIAEIISITGASEDDLK 195

Query: 206 VLH 208
             H
Sbjct: 196 SRH 198


>gi|87119587|ref|ZP_01075484.1| inosine-5'-monophosphate dehydrogenase [Marinomonas sp. MED121]
 gi|86165063|gb|EAQ66331.1| inosine-5'-monophosphate dehydrogenase [Marinomonas sp. MED121]
          Length = 489

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIAL +    +    +  V     ++  +    S ++      
Sbjct: 41  NLPLVSAAMDTVTEHRMAIALAQEGGIAIVHKNLSVEEQAAEVRRVKKYESGIVR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + + + +      V VV +G  L GI+T  D+   F KD    SV D+M 
Sbjct: 98  VTINPEASVRELVKLTASHNISGVPVV-QGDDLVGIVTSRDVR--FVKDF-EQSVADIMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        +LL +H I  +++V+   +  G++   D+ + 
Sbjct: 154 PKERLVTVEEGASAGQVRKLLHEHRIEKVLMVNAEFELRGMITVTDIDKA 203


>gi|261492510|ref|ZP_05989063.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. BOVINE]
 gi|261496785|ref|ZP_05993159.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261307532|gb|EEY08861.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. OVINE]
 gi|261311669|gb|EEY12819.1| RpiR family transcriptional regulator [Mannheimia haemolytica
           serotype A2 str. BOVINE]
          Length = 288

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 37  GLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            L ++       L F      VE+++  K R+ + G+G SG         L   G  +  
Sbjct: 108 SLDNVIEETINLLDFNVLEKVVEELRKAK-RIFLFGVGSSGLTAEDAKHKLMRIGLQTDA 166

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V      +    ++   DL+I +S SG S+E+   L ++R      +AIT   +S V   
Sbjct: 167 VTNNHFMYMQAALVKEGDLVIGISHSGYSEEIVKSLRFSRANKATTVAITHNLRSPVTEE 226

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           A+ VL                 + + QL + D +   L+++
Sbjct: 227 ANYVLINGNRQG--HMQGDSIGTKMSQLFVLDLIYTLLVKA 265


>gi|167038838|ref|YP_001661823.1| RpiR family transcriptional regulator [Thermoanaerobacter sp. X514]
 gi|300913577|ref|ZP_07130894.1| transcriptional regulator, RpiR family [Thermoanaerobacter sp.
           X561]
 gi|307723408|ref|YP_003903159.1| RpiR family transcriptional regulator [Thermoanaerobacter sp. X513]
 gi|166853078|gb|ABY91487.1| transcriptional regulator, RpiR family [Thermoanaerobacter sp.
           X514]
 gi|300890262|gb|EFK85407.1| transcriptional regulator, RpiR family [Thermoanaerobacter sp.
           X561]
 gi|307580469|gb|ADN53868.1| transcriptional regulator, RpiR family [Thermoanaerobacter sp.
           X513]
          Length = 280

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/188 (18%), Positives = 65/188 (34%), Gaps = 5/188 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSII--AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           T K  S+     +   + +II    K  + S+E ++      +   AV  I     ++ I
Sbjct: 76  TYKTKSIQGFVNIDDDINTIIVKISKNNMDSIEKTMDMLDRNEVERAVIAILNA-NKIDI 134

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G S  +   +                +         + + D+ I +S+SG + +   
Sbjct: 135 YGVGASAIVAQDMLQKFMRINKSCTAYSDSHMQLASAANLRQGDVAIGISYSGQTADTVD 194

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            L  A+      I IT    S +   +DI L +         G     S + QL + D L
Sbjct: 195 ALRIAKNSGATTICITRFGNSPITEVSDIKLFVYSTEAIFRSGA--MASRMAQLNVVDIL 252

Query: 190 AIALLESR 197
              +   +
Sbjct: 253 FSIIACRK 260


>gi|114766363|ref|ZP_01445345.1| CBS domain protein [Pelagibaca bermudensis HTCC2601]
 gi|114541396|gb|EAU44443.1| CBS domain protein [Roseovarius sp. HTCC2601]
          Length = 149

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + +A+ +L+E+R G V + ++GQ   GI++E DI R       D+ T +V+ +M
Sbjct: 23  VPPATTVAEAVRMLAERRIGGVVISEDGQTPLGILSERDIVRVLSAQGADVLTATVDALM 82

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N +    D    V +  + +     + VV++    +G++   DL+  
Sbjct: 83  TTNLQTCTRDEDSNVVLARMTEGRFRHMPVVEE-GVMVGMISIGDLVAA 130



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 24/44 (54%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +   T +  A+++L +  I  +++ +D Q  +GI+   D++R
Sbjct: 21  VTVPPATTVAEAVRMLAERRIGGVVISEDGQTPLGILSERDIVR 64


>gi|59711498|ref|YP_204274.1| DNA-binding transcriptional regulator HexR [Vibrio fischeri ES114]
 gi|197335305|ref|YP_002155653.1| HTH-type transcriptional regulator HexR [Vibrio fischeri MJ11]
 gi|59479599|gb|AAW85386.1| predicted DNA-binding transcriptional regulator [Vibrio fischeri
           ES114]
 gi|197316795|gb|ACH66242.1| HTH-type transcriptional regulator HexR [Vibrio fischeri MJ11]
          Length = 285

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/152 (19%), Positives = 60/152 (39%), Gaps = 4/152 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K ++   G+G S  +     +       P                 T 
Sbjct: 117 QVNRAVDLLTQAK-KISFFGLGASASVAHDAMNKFFRFNIPIACFDDIVMQRMSCINSTE 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++++S +G +  L  I   A+     +IAIT++  S +   A + + L    ++  +
Sbjct: 176 NDVVVLISHTGRTKSLVEIAELAKSNGATVIAITAK-DSPLEKMASLAICLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
              P  S ++Q+ + D LA      R     D
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRGVGFRD 264


>gi|330834622|ref|YP_004409350.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329566761|gb|AEB94866.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 149

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 53/128 (41%), Gaps = 5/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G +L  L     DVM+       V+    L +   ++ EK  G V V D+    +GI T+
Sbjct: 19  GKRLSLLMKRVKDVMNVPVF--QVEANTTLQETCKLMMEKGVGSVVVTDK-GVPRGIFTD 75

Query: 270 GDIFRNFHKDLNTLS-VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D  +      + L  +  V    +   + ED  +T A +L+    I  L V +   + +
Sbjct: 76  RDAVKAIANGASALDELRTVATMGDLVTVDEDLEITKAAKLMSDRKIRHLPVKNKEGEIV 135

Query: 328 GIVHFLDL 335
           G+V   DL
Sbjct: 136 GMVSVTDL 143



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 50/135 (37%), Gaps = 4/135 (2%)

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L  I  +  S++      V+ +P         L  T   +M+  +G  +       R 
Sbjct: 12  VTLKLIYGKRLSLLMKRVKDVMNVPVFQVEANTTLQETCKLMMEKGVGSVVVTDKGVPRG 71

Query: 199 -FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            F++ D          G   +     + +   +  V     +  A  ++S+++   + V 
Sbjct: 72  IFTDRDAV---KAIANGASALDELRTVATMGDLVTVDEDLEITKAAKLMSDRKIRHLPVK 128

Query: 258 DEGQKLKGIITEGDI 272
           ++  ++ G+++  D+
Sbjct: 129 NKEGEIVGMVSVTDL 143


>gi|149378412|ref|ZP_01896109.1| DNA-binding transcriptional regulator HexR [Marinobacter algicola
           DG893]
 gi|149357305|gb|EDM45830.1| DNA-binding transcriptional regulator HexR [Marinobacter algicola
           DG893]
          Length = 290

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ + Q         A++ +   K ++   G+G S  +             P     
Sbjct: 112 IASLDKARQALDPKALASAIDYLIQAK-QINFFGMGGSAPVAMDAQHKFFRFNIPVMSYD 170

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A          T+ D+I+++S++G + E   I  +AR     +I IT    S +A    
Sbjct: 171 DALMQRMVAAGATKGDVIVLISYTGRTRETVEIAQHARTNGATVIGITM-PDSPLADVCT 229

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +V+ +    ++  +   P +S I+ L + D LA  +   R 
Sbjct: 230 VVIEVTAPEDTEVY--MPMSSRIIHLTVIDILATGVTLKRG 268


>gi|187929070|ref|YP_001899557.1| CBS domain-containing protein [Ralstonia pickettii 12J]
 gi|187725960|gb|ACD27125.1| CBS domain containing protein [Ralstonia pickettii 12J]
          Length = 151

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 218 VCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +  SD++H  G+++  V     L  A+  ++EK  G + VV E  +L G++T  +I +  
Sbjct: 1   MKVSDILHVKGNTLYTVAPETKLQVAVQTMAEKDIGSL-VVMEYGELVGMLTFREIIKVV 59

Query: 277 HKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            K+  +     ++  VM  +P     +T +    +++ +H++  L V+D  +  +G++ F
Sbjct: 60  AKNHGSVGEGTTIRKVMDDHPVTCTPETEVNEVRRIMLEHHVRYLPVLD-SRTLMGVISF 118

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 119 YDVAKA 124


>gi|86357820|ref|YP_469712.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
           etli CFN 42]
 gi|86281922|gb|ABC90985.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
           etli CFN 42]
          Length = 144

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIK 291
               + +A  ILS+K+ G + VV    ++ G+ TE D+        K+     +  VM  
Sbjct: 21  PNTTVAEAAAILSKKKIGAIVVVGMENRISGMFTERDLVHAIAKRGKESLDQPLSQVMTS 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 E+T +   M+L+       + V +   K  GI+   D+++  I
Sbjct: 81  KVYRCHEETTVNELMELMTSRRFRHVPV-ESNGKLAGIISIGDVVKSRI 128



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVITAGPNTTVAEAAAILSKKKIGAIVVVGMENRISGMFTERDLVHA 61


>gi|88705997|ref|ZP_01103705.1| protein-putative inosine monophosphate dehydrogenase-related
           protein [Congregibacter litoralis KT71]
 gi|88699711|gb|EAQ96822.1| protein-putative inosine monophosphate dehydrogenase-related
           protein [Congregibacter litoralis KT71]
          Length = 125

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 6/116 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---- 283
                VK    + +A+TI+S+ +   + VV++  +L G+++E D  R     +       
Sbjct: 1   MHPVTVKPDMSIFEAMTIISDNKISGLCVVEDDHQLVGVLSEMDCLRAVLSAVYNKGGFG 60

Query: 284 SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V D M   N  V      +    Q + + N     VV +  + IG +   +LL+ 
Sbjct: 61  PVRDYMTAENLIVAHPGEDVVDVAQDMLRQNKRRRPVV-EDGRLIGQITIRNLLKA 115


>gi|330835171|ref|YP_004409899.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567310|gb|AEB95415.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 280

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 53/107 (49%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +   +  +++     ++AITI+  + FG + VV+  ++  GI+TE D    F       S
Sbjct: 79  YMTVNPMVIEENQDALEAITIMVTRNFGSLPVVNMLKRPVGIVTERDFLLMFQDLDQMFS 138

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + + +      + ++TLL  A++ + +     L V+D+  + +GIV 
Sbjct: 139 ISNFITPKVNTVFKETLLEQAVRQMLRRGFRRLPVIDEEGRVVGIVT 185



 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/112 (28%), Positives = 48/112 (42%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-------IFRNFHKDLN-TLS 284
           V     L  A+  +  + F  + V+DE  ++ GI+T  D       +      +L  +  
Sbjct: 150 VFKETLLEQAVRQMLRRGFRRLPVIDEEGRVVGIVTAADAVKAAAKMVEKLEPELFFSRR 209

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM      I E+     A  LL    I  LMV+D   +A GI+   DLL
Sbjct: 210 VKDVMKTPVITIDEERSANEAAALLITKGIGALMVLDKEGRAKGIITERDLL 261



 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 14/123 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
              + P+V +   L +A   ++++  G V V DE   +KG+++  D+             
Sbjct: 7   MITNPPVVSVNDGLKEAFKKVNDRGLGRVIVADE--VVKGLLSTRDLLSVLISFCPTSCT 64

Query: 277 HKDLNTLSVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             D+  + V  V   M  NP VI E+     A+ ++   N   L VV+  ++ +GIV   
Sbjct: 65  QADIYKMGVSQVSNYMTVNPMVIEENQDALEAITIMVTRNFGSLPVVNMLKRPVGIVTER 124

Query: 334 DLL 336
           D L
Sbjct: 125 DFL 127



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 25/56 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
               +  +       +A  +L  K  G + V+D+  + KGIITE D+    H  L+
Sbjct: 214 MKTPVITIDEERSANEAAALLITKGIGALMVLDKEGRAKGIITERDLLIALHYQLH 269


>gi|218297190|ref|ZP_03497852.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
 gi|218242467|gb|EED09006.1| putative signal transduction protein with CBS domains [Thermus
           aquaticus Y51MC23]
          Length = 150

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 26/139 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--------------ITEGD 271
              +  +++    L +A   + E R+G   VVDE  +L G+               ++ +
Sbjct: 7   MTRAPEILRPKATLEEAARKILETRYGGFPVVDEEGRLLGLLQVEELLPRPENVPFSDVE 66

Query: 272 IFRNFHKDLN------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             + F + ++            +  VE VM+K    +  +  L  A+Q+L    +  L V
Sbjct: 67  ALQLFGEWVDEGTLQEIYRRYQSTPVEAVMLKEIPRVHPEDPLGKALQVLLTTEVRHLPV 126

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VD   K +GI+   D+L+ 
Sbjct: 127 VDQEDKVVGILTRSDILKL 145



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D+M + P+++     L  A + + +       VVD+  + +G++   +LL
Sbjct: 1   MKVADLMTRAPEILRPKATLEEAARKILETRYGGFPVVDEEGRLLGLLQVEELL 54



 Score = 39.1 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 25/64 (39%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +            IP V    PL  A+ +L       + VVD+  K+ GI+T  DI +
Sbjct: 85  RRYQSTPVEAVMLKEIPRVHPEDPLGKALQVLLTTEVRHLPVVDQEDKVVGILTRSDILK 144

Query: 275 NFHK 278
              +
Sbjct: 145 LILR 148


>gi|134045385|ref|YP_001096871.1| signal-transduction protein [Methanococcus maripaludis C5]
 gi|132663010|gb|ABO34656.1| putative signal-transduction protein with CBS domains
           [Methanococcus maripaludis C5]
          Length = 186

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 50/118 (42%), Gaps = 8/118 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
               +  V +     D   IL +K  GC+ V+++  K  GIITE D+      RN     
Sbjct: 11  MSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVGIITERDLALGVVSRNLKS-- 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + VE++       I   + +  A + +   N+  L VV+  +  +GIV   D+ + 
Sbjct: 69  KEVIVEEISSPKLIAIAPKSTIMDAARKMDSENVKRLPVVEGDE-LLGIVTVSDITKL 125



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            LSV + M      +  DT       +L+   I  L+V++D  K +GI+   DL   G++
Sbjct: 4   ELSVTEAMSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVGIITERDLA-LGVV 62


>gi|53729201|ref|ZP_00134052.2| COG1737: Transcriptional regulators [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|126208186|ref|YP_001053411.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae L20]
 gi|165976123|ref|YP_001651716.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|190150017|ref|YP_001968542.1| HTH-type transcriptional regulator [Actinobacillus pleuropneumoniae
           serovar 7 str. AP76]
 gi|303251500|ref|ZP_07337676.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|303252374|ref|ZP_07338540.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|307245565|ref|ZP_07527651.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|307247684|ref|ZP_07529723.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|307249916|ref|ZP_07531889.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|307252261|ref|ZP_07534158.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|307254520|ref|ZP_07536355.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|307258975|ref|ZP_07540706.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|307261172|ref|ZP_07542847.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|307263350|ref|ZP_07544966.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
 gi|126096978|gb|ABN73806.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 5b str. L20]
 gi|165876224|gb|ABY69272.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 3 str. JL03]
 gi|189915148|gb|ACE61400.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 7 str. AP76]
 gi|302648833|gb|EFL79023.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. 4226]
 gi|302649732|gb|EFL79912.1| putative HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306853267|gb|EFM85486.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 1 str. 4074]
 gi|306855787|gb|EFM87951.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 2 str. S1536]
 gi|306858044|gb|EFM90127.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 4 str. M62]
 gi|306860183|gb|EFM92199.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 6 str. Femo]
 gi|306862503|gb|EFM94462.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 9 str. CVJ13261]
 gi|306866999|gb|EFM98856.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 11 str. 56153]
 gi|306868903|gb|EFN00705.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 12 str. 1096]
 gi|306871228|gb|EFN02956.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 13 str. N273]
          Length = 290

 Score = 75.7 bits (185), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q +L ++IAE   L             +    VE+++  + R+ + G+G SG       
Sbjct: 106 LQSSLNNVIAETINLLDF---------QELEYVVEELQKAQ-RIFLFGVGSSGLTAEDAK 155

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +  V      +    ++   D++I +S SG SDE+ + L  AR+     IA
Sbjct: 156 HKLMRIGLQTDAVTNNHFMYMQASLLREGDVVIGISHSGYSDEVISALKIARKNHAKTIA 215

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IT   +S +   AD VL                 + + QL + D +   L+++
Sbjct: 216 ITHHIRSPITNVADYVLINGNRQG--HMQGDSIGTKMAQLFVLDLIYSLLVKA 266


>gi|326440855|ref|ZP_08215589.1| hypothetical protein SclaA2_07293 [Streptomyces clavuligerus ATCC
           27064]
          Length = 139

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
                  +     L  A  ++ E   G + + D  ++L GI+T+ DI         D + 
Sbjct: 8   MHAGAQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDIVVGCVAVGHDPSK 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  D+    P+ I   + +   +Q +  H I  L V+ + ++ +G++   DL R
Sbjct: 68  VTAGDLARGTPRWIDAGSGVEDVLQEMEGHQIRRLPVI-ENKRLVGMISEADLAR 121



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M    + I     L  A QL+R+  +  L + D  ++  GI+   D++
Sbjct: 2   TTAKDIMHAGAQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDIV 55


>gi|255576623|ref|XP_002529201.1| voltage-gated clc-type chloride channel, putative [Ricinus
           communis]
 gi|223531319|gb|EEF33157.1| voltage-gated clc-type chloride channel, putative [Ricinus
           communis]
          Length = 776

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 29/136 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              +   V     L +A+  + E +  CV VVD+   L+GI+T GD  R  +        
Sbjct: 607 MSKNFVKVLGASTLKEAVDCMHESKQNCVLVVDDEDLLEGILTYGDFRRLSNKSDEATIG 666

Query: 278 ----KDLNTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVV---- 320
               KD+NT  V  V           +       DT L +A +L+    I  L VV    
Sbjct: 667 ESAIKDVNTCLVSSVCTRGISYRGQGRGLLTCYPDTDLAIAKELMEAKGIKQLPVVKRGR 726

Query: 321 ----DDCQKAIGIVHF 332
               +  ++ + I+H+
Sbjct: 727 GSWKERKRRVVAILHY 742



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ L V   M KN   +L  + L  A+  + +   + ++VVDD     GI+ + D  R 
Sbjct: 598 LDDLKVSRAMSKNFVKVLGASTLKEAVDCMHESKQNCVLVVDDEDLLEGILTYGDFRRL 656


>gi|94501812|ref|ZP_01308324.1| hypothetical protein RED65_14317 [Oceanobacter sp. RED65]
 gi|94426033|gb|EAT11029.1| hypothetical protein RED65_14317 [Oceanobacter sp. RED65]
          Length = 635

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 64/157 (40%), Gaps = 22/157 (14%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPL------------VKIGCPLIDAITILSEK 249
           +DF       +  +L    ++   + D   +            +     +  A  +++E+
Sbjct: 128 DDFAEFFGSDENASLRSAVNNQQDANDLTTVKIASLLAREPVTLPTNATVKQAAEVMTEE 187

Query: 250 RFGCVAVVDE-------GQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDT 300
           R   V +VDE        ++L GIIT+ D+  R     L    ++ + M +   V+  + 
Sbjct: 188 RVSSVLIVDEYKEVEDDTRQLVGIITDRDLRKRVLAVGLPLDTNICEAMSEELMVMDHNA 247

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  A   + + N+  L ++   +K IG+V   D++R
Sbjct: 248 YVFEATLTMLRFNVHHLPIM-KKRKPIGVVSLSDIVR 283


>gi|116619880|ref|YP_822036.1| signal-transduction protein [Candidatus Solibacter usitatus
           Ellin6076]
 gi|116223042|gb|ABJ81751.1| putative signal-transduction protein with CBS domains [Candidatus
           Solibacter usitatus Ellin6076]
          Length = 147

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNF---HKDL 280
                        + +    +  +  G + V +    +KL GIIT+ D+        +D 
Sbjct: 7   MTPDPVCCIPTDTVSNVAKRMKTEDVGSLPVCESRTSRKLVGIITDRDLAIKVVADSRDP 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N ++  DVM  NP     D  L +A+  ++   +  + +V+D    +GI+   D+
Sbjct: 67  NKVTTGDVMTWNPMTCHPDDDLDIAVHSMQSEQVRRIPIVNDAGVLVGIISQADI 121



 Score = 39.5 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 2/55 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDL 335
           +  +  M  +P   +    ++   + ++  ++  L V +    +K +GI+   DL
Sbjct: 1   MKCKQAMTPDPVCCIPTDTVSNVAKRMKTEDVGSLPVCESRTSRKLVGIITDRDL 55


>gi|302540279|ref|ZP_07292621.1| CBS domain-containing protein [Streptomyces hygroscopicus ATCC
           53653]
 gi|302457897|gb|EFL20990.1| CBS domain-containing protein [Streptomyces himastatinicus ATCC
           53653]
          Length = 221

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 50/130 (38%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              ++  V    P  + +  L + +   + V+    ++ G+++E D+      RN   D 
Sbjct: 12  MTHTVVAVGREAPFKEIVRTLEQWKVSALPVLAGEGRVIGVVSEADLLPKEEFRNSDPDR 71

Query: 281 NTL-------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                           S +++M      +  +  L  A +++    +  L VVDD  +  
Sbjct: 72  LAQLRDLPGIAKAGAVSADELMTSPAITVHANATLAEAARIMTHKRVKRLPVVDDEGRLE 131

Query: 328 GIVHFLDLLR 337
           GIV   DLL+
Sbjct: 132 GIVSRADLLK 141



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/85 (20%), Positives = 31/85 (36%), Gaps = 7/85 (8%)

Query: 201 ENDFYVLHPGGKLG-------TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           + +F    P                  S           V     L +A  I++ KR   
Sbjct: 61  KEEFRNSDPDRLAQLRDLPGIAKAGAVSADELMTSPAITVHANATLAEAARIMTHKRVKR 120

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK 278
           + VVD+  +L+GI++  D+ + F +
Sbjct: 121 LPVVDDEGRLEGIVSRADLLKVFLR 145



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM      +  +      ++ L Q  +S L V+    + IG+V   DLL
Sbjct: 8   VSDVMTHTVVAVGREAPFKEIVRTLEQWKVSALPVLAGEGRVIGVVSEADLL 59


>gi|220915936|ref|YP_002491240.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219953790|gb|ACL64174.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 603

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 24/184 (13%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSE----NDFYVLHPGGKLGTLFVCASDVMHSGDS 229
               + +      D LA  L   + F        F      G    L         +   
Sbjct: 85  ISGKATLDVTVEEDLLAYRL-PRQEFQALLAYGPFAGHFASGLAERLRNSLERSQVASFQ 143

Query: 230 IPL--------------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
             L              +     + +A  +++E+  G + V     +  GI+T+ D   R
Sbjct: 144 PDLAVPVSTLLRGPAVRIAPAATVGEAARVMAERGVGSLIV---DSEPPGIVTDRDFRAR 200

Query: 275 NFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +       V DV     + +  D  +  A ++L    +  L +  +  +  G++   
Sbjct: 201 VLAQGRGPETPVLDVYTAPLRTVGGDVPVYEAWRILLDSGVHHLPITRNGGEIAGVLTAT 260

Query: 334 DLLR 337
           DLL+
Sbjct: 261 DLLK 264


>gi|306520655|ref|ZP_07407002.1| RpiR family transcriptional regulator [Clostridium difficile
           QCD-32g58]
          Length = 217

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKL 82
            +  A + + +    +++LE++++   S   H     I   K +V   GIG SG I    
Sbjct: 93  ALDTAKKLLSS---NVTTLENTVEIINSKDVHDCARLIINAK-KVYFIGIGYSGIIAQDS 148

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
                  G       ++        ++   DLII +S SG ++E+   +  AR  +  +I
Sbjct: 149 NYKFMRIGLNCVSFDSSHTMIMMSSIMEEGDLIIAISHSGETEEIIKTVKLARANNAKII 208

Query: 143 AITS 146
           +IT 
Sbjct: 209 SITE 212


>gi|156974739|ref|YP_001445646.1| hypothetical protein VIBHAR_02457 [Vibrio harveyi ATCC BAA-1116]
 gi|156526333|gb|ABU71419.1| hypothetical protein VIBHAR_02457 [Vibrio harveyi ATCC BAA-1116]
          Length = 626

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/150 (18%), Positives = 61/150 (40%), Gaps = 14/150 (9%)

Query: 202 NDFYVLHPGGKL---GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV- 257
            D   L         G  F  A            ++    + +A  +++E+    + +V 
Sbjct: 129 EDSARLRTAVSNQSDGNDFTTAKARKILSREPVTLEASATVSEAAILMAEEGVTALLIVR 188

Query: 258 -------DEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQL 308
                  D+  +L GI+TE D+  R   +  +  + V +VM  +   +     +  AM  
Sbjct: 189 AQEDITEDDDDQLLGILTEKDLCVRVLAEGRDSDIPVSEVMSYDVVSLDYSAYVFEAMLT 248

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++N+  L ++   +K IG++   D++R+
Sbjct: 249 MLRYNVHHLPIL-KDKKPIGLISMTDIVRY 277


>gi|144900626|emb|CAM77490.1| mannose-1-phosphate guanyltransferase [Magnetospirillum
           gryphiswaldense MSR-1]
          Length = 367

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDV 288
             L+     + +A+ IL         VVD G +L G IT+GD+ R   K ++       +
Sbjct: 7   KSLIGPDGKIAEALEILETGGLQICLVVDTGNRLIGTITDGDVRRGILKGISLDAPATLI 66

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M   P+V+           L+    +  + +VD     + ++  +D LR 
Sbjct: 67  MNSKPRVVSPADSQQRIQSLMDDLFLRHVPMVDANGVLVDLITSVDYLRA 116


>gi|306825600|ref|ZP_07458939.1| CBS domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304431961|gb|EFM34938.1| CBS domain protein [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|168484842|ref|ZP_02709787.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
 gi|172041990|gb|EDT50036.1| AcuB family protein [Streptococcus pneumoniae CDC1873-00]
 gi|332203908|gb|EGJ17975.1| CBS domain pair family protein [Streptococcus pneumoniae GA47368]
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|54022043|ref|YP_116285.1| hypothetical protein nfa790 [Nocardia farcinica IFM 10152]
 gi|54013551|dbj|BAD54921.1| hypothetical protein [Nocardia farcinica IFM 10152]
          Length = 156

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 55/133 (41%), Gaps = 6/133 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P      L   A D+M  G     +     +  A  ++++   G + V DE +++ GI+
Sbjct: 9   EPTRTRRQLMTTARDIMKPG--AQWISKQDTVERAAQLMADLGVGSLVVADENERMCGIV 66

Query: 268 TEGDIF---RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           T+ DI         +  T    ++    P+ +  D  +   +  +  H +  + V+ + +
Sbjct: 67  TDRDIVVKCVAHGANPATTPAAELCEATPRWVAADADVEEVLDAMENHRVKRMPVI-ENK 125

Query: 325 KAIGIVHFLDLLR 337
           + +G++   DL R
Sbjct: 126 RLVGMISEADLAR 138



 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 27/63 (42%), Gaps = 1/63 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   V     + + +  +   R   + V+ E ++L G+I+E D+ R+   +  +  V
Sbjct: 91  CEATPRWVAADADVEEVLDAMENHRVKRMPVI-ENKRLVGMISEADLARHLDDNQLSEFV 149

Query: 286 EDV 288
             V
Sbjct: 150 TAV 152


>gi|146300235|ref|YP_001194826.1| CBS domain-containing protein [Flavobacterium johnsoniae UW101]
 gi|146154653|gb|ABQ05507.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Flavobacterium johnsoniae UW101]
          Length = 639

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMI 290
                 + +   I+++K+ G + +VDE     GI+T+ D+           T + E +M 
Sbjct: 180 CSPSTTVKEIARIMNKKKVGVILIVDE-MLPIGILTDKDLRNKIVTGDFPITTTAETIMT 238

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
           K      +   +T A   + + NIS L +  D     KA+GI+   D++
Sbjct: 239 KPVITYPKKMTVTEAQMAMMKSNISHLCLTKDGTVNTKAVGILSKHDVM 287



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K        T +    +++ +  + V+++VD+    IGI+   DL
Sbjct: 174 SKKIVTCSPSTTVKEIARIMNKKKVGVILIVDE-MLPIGILTDKDL 218


>gi|52549240|gb|AAU83089.1| Zn-dependent proteases [uncultured archaeon GZfos26E7]
          Length = 368

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           V+    + + + ++ EK+     +VD+   K+ GI+T  DI      +   + V++VM K
Sbjct: 255 VQDNLTISELLRLMFEKKHLGYPIVDQFTGKIVGIVTFTDIRSVPMSEHGNVLVQEVMAK 314

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   I ED     A++++   N+  L+V D      GIV   DL R
Sbjct: 315 NVIFIPEDADAMDALKIMSTENVGQLLVQDK-GSITGIVSRTDLTR 359



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDD-CQKAIGIVHFLDL 335
           L  + V D+M +    + ++  ++  ++L+ +     L   +VD    K +GIV F D+
Sbjct: 239 LEGIRVRDLMTREIAYVQDNLTISELLRLMFEKK--HLGYPIVDQFTGKIVGIVTFTDI 295


>gi|325923778|ref|ZP_08185394.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas gardneri ATCC 19865]
 gi|325545750|gb|EGD16988.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas gardneri ATCC 19865]
          Length = 142

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
            +++EK  G V V+D G +L GI++E D  R      +  +T SV ++M      +    
Sbjct: 29  RLMAEKGIGAVLVMD-GPRLIGIVSERDYARKVVLRDRASSTTSVAEIMSTEVVTVSPSD 87

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 88  TVERCMQLMTDGRFRHLPVV-ENGRVHGVISIGDLVKA 124



 Score = 39.1 bits (90), Expect = 0.96,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D+                S        +  V     +   + ++++ RF  + VV E
Sbjct: 52  SERDYA--RKVVLRDRASSTTSVAEIMSTEVVTVSPSDTVERCMQLMTDGRFRHLPVV-E 108

Query: 260 GQKLKGIITEGDIFRNFHKD 279
             ++ G+I+ GD+ +   ++
Sbjct: 109 NGRVHGVISIGDLVKAVIEN 128


>gi|307730415|ref|YP_003907639.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
 gi|307584950|gb|ADN58348.1| CBS domain containing protein [Burkholderia sp. CCGE1003]
          Length = 152

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL DA+  ++E   G + VV E   L G++T  +I     ++   + T ++  VM
Sbjct: 17  VTPDTPLHDAVNTMAEHDIGSL-VVMEYGDLVGMLTFREIILTLKENGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVL-ESRTLMGVISFYDVAKA 123



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTPLHDAVNTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|91784441|ref|YP_559647.1| hypothetical protein Bxe_A1358 [Burkholderia xenovorans LB400]
 gi|296158111|ref|ZP_06840943.1| CBS domain containing protein [Burkholderia sp. Ch1-1]
 gi|91688395|gb|ABE31595.1| Conserved hypothetical protein [Burkholderia xenovorans LB400]
 gi|295891447|gb|EFG71233.1| CBS domain containing protein [Burkholderia sp. Ch1-1]
          Length = 153

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I     K+   + T ++  VM
Sbjct: 17  VTPDTTLHDAVNTMAEHDIGSL-VVMEYGDLVGMLTFREIILTLSKNGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVL-ESRTLMGVISFYDVAKA 123



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTTLHDAVNTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|254228314|ref|ZP_04921741.1| cyclic nucleotide binding protein [Vibrio sp. Ex25]
 gi|262394379|ref|YP_003286233.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|151939120|gb|EDN57951.1| cyclic nucleotide binding protein [Vibrio sp. Ex25]
 gi|262337973|gb|ACY51768.1| Signal transduction protein [Vibrio sp. Ex25]
          Length = 626

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 59/115 (51%), Gaps = 11/115 (9%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVV--------DEGQKLKGIITEGDI-FRNFHKDLNT-L 283
           +    + +A  +++E+    + +V        ++ ++L GI+T+ D+  R   + ++T +
Sbjct: 164 EATASIQEAAILMAEENVTSLLIVRPAEELTEEDDEQLLGILTDRDLCIRVLAQGIDTNI 223

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V +VM  +   +  +  +  AM  + ++N+  L ++   +K IGI+   D++R+
Sbjct: 224 PVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPIL-KDKKPIGIIGMTDIVRY 277



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQK 325
           R+   D  T     ++ ++P  +     +  A  L+ + N++ L++V        +D ++
Sbjct: 141 RSESNDFTTAKARKILARDPVTLEATASIQEAAILMAEENVTSLLIVRPAEELTEEDDEQ 200

Query: 326 AIGIVHFLDL 335
            +GI+   DL
Sbjct: 201 LLGILTDRDL 210


>gi|325108779|ref|YP_004269847.1| Cl- channel voltage-gated family protein [Planctomyces brasiliensis
           DSM 5305]
 gi|324969047|gb|ADY59825.1| Cl- channel voltage-gated family protein [Planctomyces brasiliensis
           DSM 5305]
          Length = 633

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              +V        ++  G PL   + +++E +     VV +  +L GI +  D+    + 
Sbjct: 488 KVDEVYRKNAQPVMIPRGMPLERIVHLVAETQQHYFPVVSDKGRLVGIFSADDVRAYLYN 547

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIV 330
           +      + EDVM  NP V+  D  L  A++     N+  L VV   D  + IG+V
Sbjct: 548 EAIWTLANAEDVMTANPVVVTPDDNLNTALRYFTSTNLDELPVVSSTDKGRLIGMV 603


>gi|302538431|ref|ZP_07290773.1| CBS domain-containing protein [Streptomyces sp. C]
 gi|302447326|gb|EFL19142.1| CBS domain-containing protein [Streptomyces sp. C]
          Length = 144

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 48/111 (43%), Gaps = 6/111 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
               +  V+    L DA  ++ E   GC+ +  +  +L+G+IT+ DI        KD   
Sbjct: 11  MTQGVQCVREDQSLQDAAKMMRELNVGCLPICGDDGRLQGMITDRDIVIKCCADGKDPAA 70

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           +   D+   N   I  D+    A++ +  H I  L V+D     + IG++ 
Sbjct: 71  MRAGDLAG-NLHWIDADSNAQQALETMEIHQIKRLPVIDVEGGRRLIGMIT 120



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 28/56 (50%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L   D+M +  + + ED  L  A +++R+ N+  L +  D  +  G++   D++
Sbjct: 3   RNLRARDIMTQGVQCVREDQSLQDAAKMMRELNVGCLPICGDDGRLQGMITDRDIV 58


>gi|307256728|ref|ZP_07538507.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
 gi|306864776|gb|EFM96680.1| Uncharacterized HTH-type transcriptional regulator [Actinobacillus
           pleuropneumoniae serovar 10 str. D13039]
          Length = 290

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q +L ++IAE   L             +    VE+++  + R+ + G+G SG       
Sbjct: 106 LQSSLNNVIAETINLLDF---------QELEYVVEELQKAQ-RIFLFGVGSSGLTAEDAK 155

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +  V      +    ++   D++I +S SG SDE+ + L  AR+     IA
Sbjct: 156 HKLMRIGLQTDAVTNNHFMYMQASLLREGDVVIGISHSGYSDEVISALKIARKNHAKTIA 215

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IT   +S +   AD VL                 + + QL + D +   L+++
Sbjct: 216 ITHHIRSPITNVADYVLINGNRQG--HMQGDSIGTKMAQLFVLDLIYSLLVKA 266


>gi|302039066|ref|YP_003799388.1| hypothetical protein NIDE3787 [Candidatus Nitrospira defluvii]
 gi|300607130|emb|CBK43463.1| conserved protein of unknown function, contains CBS domain pairs
           [Candidatus Nitrospira defluvii]
          Length = 284

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 9/121 (7%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAV-----VDEGQKLKGIITEGDIFRNF--- 276
           +    + +V     ++   T +     G V +          ++ GI+TE D+       
Sbjct: 12  YMHRQLEVVPQDTSVVTVATRMRTHSIGSVLIECFDRPHNDCRIAGIVTETDLVAKVLAP 71

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +  S+ D+M      I  D  +  A  L++  NI  L+V +     +GI+   DL+
Sbjct: 72  GRVPSRTSMADIMSSPLITIAPDRPMVDASHLMQNKNIRHLVVTEGTD-VLGIISMRDLV 130

Query: 337 R 337
           R
Sbjct: 131 R 131



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 5/105 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKN 292
               +DA   +++K  G + V++  + L GIITEGD+ R    +  D  TL V  +M   
Sbjct: 165 DETALDAAQRMADKHIGALFVMEADE-LVGIITEGDLVRKLLAYQLDPQTLRVGALMNSP 223

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I  +  +  A + +    I  L V +   K +G++   DL++
Sbjct: 224 LLDIDINRTIRDASERMSAKRIRHLAVTEHE-KVVGVLSIRDLVK 267



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 55/135 (40%), Gaps = 13/135 (9%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G +    S        +  +    P++DA  ++  K    + VV EG  + GII+  D+ 
Sbjct: 72  GRVPSRTSMADIMSSPLITIAPDRPMVDASHLMQNKNIRHL-VVTEGTDVLGIISMRDLV 130

Query: 274 RNFHKDLNTLSVEDV----------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           R+F  D +   V+ +          M    + I  D     A Q +   +I  L V++  
Sbjct: 131 RHFV-DADGGPVQALTNVYRPLSVLMKTAIETIGSDETALDAAQRMADKHIGALFVMEAD 189

Query: 324 QKAIGIVHFLDLLRF 338
           +  +GI+   DL+R 
Sbjct: 190 E-LVGIITEGDLVRK 203


>gi|119387376|ref|YP_918410.1| RpiR family transcriptional regulator [Paracoccus denitrificans
           PD1222]
 gi|119377951|gb|ABL72714.1| transcriptional regulator, RpiR family [Paracoccus denitrificans
           PD1222]
          Length = 280

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 46/182 (25%), Positives = 74/182 (40%), Gaps = 12/182 (6%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG 76
           + M +   Q A ++I   +R           +L      A   +     RV I G G SG
Sbjct: 108 AAMVDDIFQRAGQAIEEARR-----------DLDLGALRAAVAMLGKARRVDIYGYGSSG 156

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
            + S+    LA+   P+              ++   DL+ VLS+SG +  L + +  AR+
Sbjct: 157 FMASEAQHRLAALAIPAVAYSDPTLQMHSAPLLGPGDLLFVLSFSGLTSYLISNIEIARK 216

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              P++AI+ +  S+VA  AD+ L L    +S      PT        + DAL  A+ E 
Sbjct: 217 AGAPVLAISPKG-SIVASLADVNLNLNAYRQSSGRMAVPTGRVAPMYVLLDALFAAMAEE 275

Query: 197 RN 198
             
Sbjct: 276 MG 277


>gi|323485557|ref|ZP_08090903.1| hypothetical protein HMPREF9474_02654 [Clostridium symbiosum
           WAL-14163]
 gi|323694540|ref|ZP_08108707.1| hypothetical protein HMPREF9475_03571 [Clostridium symbiosum
           WAL-14673]
 gi|323401205|gb|EGA93557.1| hypothetical protein HMPREF9474_02654 [Clostridium symbiosum
           WAL-14163]
 gi|323501414|gb|EGB17309.1| hypothetical protein HMPREF9475_03571 [Clostridium symbiosum
           WAL-14673]
          Length = 188

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 65/175 (37%), Gaps = 10/175 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  L+ +  G         +E I    G++ I G G++G+I    A  L   G  ++ + 
Sbjct: 16  VKELQEACDGYDETNDAPIIESIMHS-GKIFIAGAGRTGYIMRCFAMRLIHLGFCAYVIG 74

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             E      G     DL+++ S SG +  L+  +  A++  +  +  T   +S +A  A 
Sbjct: 75  DTEMIAAKAG-----DLLLIGSGSGETKTLRVYMEKAKQLGMKTVVFTCNRESALAREAK 129

Query: 158 IVLTLPKEP--ESCPHGLAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
               +  +   +     + P  S   Q  L + D + + L    N         H
Sbjct: 130 FSCVIRAQSKFQDGRISVQPMGSLFEQQLLLLTDCITLELARRMNIDFEQLKNRH 184


>gi|288553783|ref|YP_003425718.1| acetoin dehydrogenase [Bacillus pseudofirmus OF4]
 gi|288544943|gb|ADC48826.1| acetoin dehydrogenase [Bacillus pseudofirmus OF4]
          Length = 216

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 9/111 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNF--------HKDLNTLSV 285
              P+ DA+ +L + R   + +V    +K+ GII++ DI            H +     V
Sbjct: 16  EDTPIKDAMLLLDKYRIRHIPIVQGPEKKVVGIISDRDIRDASPSIFHSTEHLEDFLKPV 75

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M +N         +     +  ++NI  L VV D  +  GI+   D+L
Sbjct: 76  SSIMQRNVITAHPLDFVEEVSTIFYENNIGCLPVVTDDDELRGIITETDIL 126



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDL 335
           E++M  +   + EDT +  AM LL ++ I  + +V    +K +GI+   D+
Sbjct: 4   EEIMKTDVITLTEDTPIKDAMLLLDKYRIRHIPIVQGPEKKVVGIISDRDI 54



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 4/83 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +  TI  E   GC+ VV +  +L+GIITE DI     + +             KV+ +
Sbjct: 92  VEEVSTIFYENNIGCLPVVTDDDELRGIITETDILHTLVELMGAHQPSS--HIEVKVLNQ 149

Query: 299 DTLLTVAMQLLRQHN--ISVLMV 319
             +L     + ++ +  I+ ++V
Sbjct: 150 TGMLASIASIFKEMHINITSVLV 172


>gi|313126966|ref|YP_004037236.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293331|gb|ADQ67791.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 142

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   D+  S   +   +   P+ +    ++ K+ G V V++    ++GI+T+ D+     
Sbjct: 1   MPVRDIARSKGEVVSARPDTPVNELAKTMASKKVGSV-VIETDGHIEGIVTDRDLALKIL 59

Query: 278 KDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +         DVM   P     D  +    + +R+H +  + V ++  K  GIV   DL
Sbjct: 60  GEGRDREAFARDVMSPKPFTADGDMGVMELCRAMREHGVRRVPVAEE-GKLSGIVTMDDL 118

Query: 336 L 336
           L
Sbjct: 119 L 119


>gi|256044898|ref|ZP_05447802.1| inosine-5'-monophosphate dehydrogenase [Brucella melitensis bv. 1
           str. Rev.1]
 gi|260565500|ref|ZP_05835984.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|265991326|ref|ZP_06103883.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
 gi|260151568|gb|EEW86662.1| CBS domain-containing protein [Brucella melitensis bv. 1 str. 16M]
 gi|263002110|gb|EEZ14685.1| CBS domain-containing protein [Brucella melitensis bv. 1 str.
           Rev.1]
          Length = 143

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 58/127 (45%), Gaps = 5/127 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGC-PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +    ++ +     +V      L  A+ +L++ + G + V DE   ++GI++E D+ R  
Sbjct: 1   MTVRSILETKGRDVVVIASADTLSQAVAMLNKHKIGALVVCDEAGHIEGILSECDVVRAL 60

Query: 277 HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                   + SV +VM    +V  E   +   M+++ +     + V ++  K +GI+   
Sbjct: 61  AAQESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIG 119

Query: 334 DLLRFGI 340
           D+++  I
Sbjct: 120 DVVKRRI 126



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 2/75 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +  +  S        + +      +   + I++  RF  + V +EG KL GII+ GD+ 
Sbjct: 64  ESQAMSKSVAEVMTSKVQVCHEHHTINQVMKIMTRSRFRHMPV-EEGGKLVGIISIGDVV 122

Query: 274 RNFHKDLNTLSVEDV 288
           +   +D+     ED+
Sbjct: 123 KRRIEDV-EREAEDI 136


>gi|169829631|ref|YP_001699789.1| acetoin utilization protein [Lysinibacillus sphaericus C3-41]
 gi|168994119|gb|ACA41659.1| Acetoin utilization protein [Lysinibacillus sphaericus C3-41]
          Length = 215

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
             +    +     +++A+ ++ +K+   + V+DE + + G+ITE DI       L     
Sbjct: 7   MNEEPYTLAPTNTVLEALKLMRDKKVRHLPVIDEERHVIGVITERDIKEVLPSSLQDEPN 66

Query: 283 -----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  VE++M+K+P V      +        +  +  L +V    K +GIV   DLL
Sbjct: 67  SPVFHAKVEEIMVKDPLVGHPLDFVEEVALTFYESKVGCLPIV-SGGKLVGIVTTTDLL 124



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 28/51 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M + P  +     +  A++L+R   +  L V+D+ +  IG++   D+
Sbjct: 3   VEEIMNEEPYTLAPTNTVLEALKLMRDKKVRHLPVIDEERHVIGVITERDI 53


>gi|86157197|ref|YP_463982.1| cyclic nucleotide-binding domain-containing protein
           [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85773708|gb|ABC80545.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 603

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 24/184 (13%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSE----NDFYVLHPGGKLGTLFVCASDVMHSGDS 229
               + +      D LA  L   + F        F      G    L         +   
Sbjct: 85  ISGKATLDVTVEEDLLAYRL-PRQEFQALLAYGPFAGHFASGLAERLRNSLERSQVASFQ 143

Query: 230 IPL--------------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
             L              +     + +A  +++E+  G + V     +  GI+T+ D   R
Sbjct: 144 PDLAVPVATLLRGPAVRIAPAATVGEAARVMAERGVGSLIV---DSEPPGIVTDRDFRAR 200

Query: 275 NFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +       V DV     + +  D  +  A ++L    +  L +  +  +  G++   
Sbjct: 201 VLAQGRGPETPVLDVYTAPLRTVGGDVPVYEAWRILLDSGVHHLPITRNGGEIAGVLTAT 260

Query: 334 DLLR 337
           DLL+
Sbjct: 261 DLLK 264


>gi|49076464|gb|AAT49566.1| PA0250 [synthetic construct]
          Length = 145

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     ++DA+ +++EK  G + VV+   ++ G+++E D  R      +   
Sbjct: 11  KQNQQVYTIGADEMVLDALRLMAEKNIGALLVVN-HGEVVGVVSERDYARKMVLKGRSSI 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +M      +     +   M L+   ++  L VV +  + +G++   DL++  I
Sbjct: 70  GTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHLRHLPVV-EDGQLLGLLSIGDLVKAAI 127


>gi|89100101|ref|ZP_01172970.1| acetoin utilization protein [Bacillus sp. NRRL B-14911]
 gi|89085191|gb|EAR64323.1| acetoin utilization protein [Bacillus sp. NRRL B-14911]
          Length = 215

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTL--SV 285
                + +A+ ++++++   + ++D  ++L GII++ DI            D + L   +
Sbjct: 15  SPDHSIAEALRLMNDRKIRHLPIIDSERRLVGIISDRDIRDAAPSIFQLDADRSELGKPL 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +M  +               +L +HNI  + +V      +GIV   DLL
Sbjct: 75  KAIMKTDIITGHPLDFAEEIAAVLYEHNIGCVPIV-KEGTLVGIVTETDLL 124



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VED+M  +   +  D  +  A++L+    I  L ++D  ++ +GI+   D+
Sbjct: 3   VEDIMKVDVAALSPDHSIAEALRLMNDRKIRHLPIIDSERRLVGIISDRDI 53


>gi|21228469|ref|NP_634391.1| hexulose-6-phosphate isomerase [Methanosarcina mazei Go1]
 gi|20906950|gb|AAM32063.1| hexulose-6-phosphate isomerase [Methanosarcina mazei Go1]
          Length = 219

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/223 (17%), Positives = 80/223 (35%), Gaps = 30/223 (13%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
            F+ +H K+  +    +     ++     +      +  L+              ++KI 
Sbjct: 7   AFWRTHMKT-DQVDQVIDCEDVIKSMKFIVENINEVIKLLDR-------EDIKSMLQKIL 58

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
               R+ + G G+SG +    A  L   G   + V            + + D++I +S S
Sbjct: 59  EGD-RIFVMGAGRSGLVAKAFAMRLMHLGFTVYVVGETTTP-----AVGQKDVVIAISGS 112

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP--------------KEPE 167
           G +  +  +    +     LI +TS+ +S +   +DI + LP              K   
Sbjct: 113 GETRSIADLGKIVKDIGSTLITVTSKKESTLGRTSDITMVLPSKTKNDHDAGGSLEKNMR 172

Query: 168 SCPHGLAPTTSAI--MQLAIGDALAIALLESRNFSENDFYVLH 208
                L P  +A   + L   D++   L++ +  SE +  + H
Sbjct: 173 GDYKNLPPLGTAFEIISLVFLDSVIAQLIKLKGVSEAELKLRH 215


>gi|289425068|ref|ZP_06426845.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           SK187]
 gi|289154046|gb|EFD02734.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           SK187]
          Length = 290

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 85  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 140

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 141 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 200

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 201 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 258

Query: 189 LAIALLE 195
           L   + +
Sbjct: 259 LFARVAQ 265


>gi|157692168|ref|YP_001486630.1| cystathionine beta-synthase [Bacillus pumilus SAFR-032]
 gi|157680926|gb|ABV62070.1| possible cystathionine beta-synthase [Bacillus pumilus SAFR-032]
          Length = 140

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +   +      +A   + +   G + VV+ G +L GI+T+ D+       K  N+ 
Sbjct: 1   MTKKVVTCQQDDNSYEAAVKMRDADIGAIPVVN-GDQLVGIVTDRDLVLRGIAEKKPNSQ 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  +M K      ED  L   ++L+ +H +  + VV       GIV   DL
Sbjct: 60  EVGSIMTKEVLTAEEDATLEEIVRLMSEHQLRRIPVV-KNGALTGIVALGDL 110



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M K      +D     A   +R  +I  + VV+  Q  +GIV   DL+  GI
Sbjct: 1   MTKKVVTCQQDDNSYEAAVKMRDADIGAIPVVNGDQ-LVGIVTDRDLVLRGI 51


>gi|18978325|ref|NP_579682.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Pyrococcus furiosus DSM 3638]
 gi|18894155|gb|AAL82077.1| inosine-5'-monophosphate dehydrogenase related protein II
           [Pyrococcus furiosus DSM 3638]
          Length = 179

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
                +V+    +     ILS  + G   VV EG ++ G++TE DI        K+   +
Sbjct: 12  KRKAIVVQPKDTVDRVAKILSRNKAGSA-VVMEGDEILGVVTERDILDKVVAKGKNPKEV 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE++M KNP  I  D  +   ++L+ +  +  ++V     K IG V   D+L  
Sbjct: 71  KVEEIMTKNPVKIEYDYDIEDVIELMTEKGVRRVLVT-KFGKPIGFVTAADILAA 124


>gi|298674758|ref|YP_003726508.1| CBS domain-containing membrane protein [Methanohalobium evestigatum
           Z-7303]
 gi|298287746|gb|ADI73712.1| CBS domain containing membrane protein [Methanohalobium evestigatum
           Z-7303]
          Length = 155

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 34/136 (25%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------- 274
           K    +     IL +     V VVD+   + G+I+E D+ R                   
Sbjct: 15  KSSDSIRSTAQILKKNGISGVPVVDDKNNIVGVISEEDLLRFLEIPDHRGLWLPSPFEVI 74

Query: 275 --------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                         +   D     V+ VM  +   I  +  +  A QL+ +H I+ L V+
Sbjct: 75  EIPIREFVSWEETKHMLSDFGDKKVQQVMKTDVLTITPEDTIEYASQLMTKHKINRLPVI 134

Query: 321 DDCQKAIGIVHFLDLL 336
            +  K IGIV   D++
Sbjct: 135 -EDGKLIGIVTRGDII 149



 Score = 49.5 bits (117), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 30/56 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+DVM  +         +    Q+L+++ IS + VVDD    +G++   DLLRF
Sbjct: 1   MKVKDVMNSDVIYSKSSDSIRSTAQILKKNGISGVPVVDDKNNIVGVISEEDLLRF 56



 Score = 39.9 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 13/76 (17%), Positives = 28/76 (36%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F        + + F            +  +     +  A  ++++ +   + V+ E  K
Sbjct: 80  EFVSWEETKHMLSDFGDKKVQQVMKTDVLTITPEDTIEYASQLMTKHKINRLPVI-EDGK 138

Query: 263 LKGIITEGDIFRNFHK 278
           L GI+T GDI     +
Sbjct: 139 LIGIVTRGDIIEGLSR 154


>gi|268324812|emb|CBH38400.1| conserved hypothetical protein containing CBS domain pair
           [uncultured archaeon]
          Length = 154

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 29/131 (22%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------------- 277
               +++  T+L E     V VV++ +++ G+++  DI +                    
Sbjct: 18  ENDTVLNIATVLKENSIAGVPVVNDRKEVVGVVSVSDILKLLDDFHWYTPFFSAMDILHL 77

Query: 278 ------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                       ++++ + V+D M KNPK I  DTL+  A Q++     + L V+D   K
Sbjct: 78  HSDELENVKRDIEEVSEMKVKDAMSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGK 137

Query: 326 AIGIVHFLDLL 336
            +GIV   D++
Sbjct: 138 LVGIVARADII 148



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 33/55 (60%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VE++M ++     E+  +     +L++++I+ + VV+D ++ +G+V   D+L+ 
Sbjct: 4   KVEEIMTRDVITATENDTVLNIATVLKENSIAGVPVVNDRKEVVGVVSVSDILKL 58



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   +     + DA  I+    F  + V+D   KL GI+   DI  + 
Sbjct: 101 MSKNPKTIAPDTLIDDAAQIMYSTGFNRLPVLDGKGKLVGIVARADIISSL 151


>gi|253998937|ref|YP_003051000.1| inosine-5'-monophosphate dehydrogenase [Methylovorus sp. SIP3-4]
 gi|253985616|gb|ACT50473.1| inosine-5'-monophosphate dehydrogenase [Methylovorus sp. SIP3-4]
          Length = 486

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H    + T     + V        +
Sbjct: 40  NIPLVSAAMDTVTEAPLAIALAQEGG-----MGIIHKNMNIQTQAAHVARVKRFESGVVN 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D + +  + +   + VVD G K+ GI+T  D+   F  +L+   + ++
Sbjct: 95  DPVTIQPHMTVRDVLALTRQHKISGLPVVD-GTKVVGIVTNRDLR--FETNLDQ-PIVNI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E       M LL +H +  ++VV+D     G++   D+ +
Sbjct: 151 MTPRERLVTVPEGAPREAVMALLHKHRLERVLVVNDAFDLKGLITVKDIQK 201


>gi|289811900|ref|ZP_06542529.1| inosine 5'-monophosphate dehydrogenase [Salmonella enterica subsp.
           enterica serovar Typhi str. AG3]
          Length = 171

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V     L +   +     F    VV E  +L GIIT  D+   F  DLN   V   M   
Sbjct: 2   VLPTTTLHEVKALTERNGFAGYPVVTEDNELVGIITGRDVR--FVTDLNQ-PVSVYMTPK 58

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + E     V +  + +  +   +VVDD    +G++   D  + 
Sbjct: 59  ERLVTVREGEAREVVLAKMHEKRVEKALVVDDNFHLLGMITVKDFQKA 106


>gi|91773710|ref|YP_566402.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712725|gb|ABE52652.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 258

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 56/130 (43%), Gaps = 3/130 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDI 272
           T       +       PL+     ++DA  ++ E   G   +V  +  +++ GI++  DI
Sbjct: 57  TSTRSNVTIGGFVHDCPLITPKTDIMDAARLIIESGVGRCPIVRSETEREIVGILSNSDI 116

Query: 273 FRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             N   + +NT    DVM  +        LLT    +L   N S L VV +  +  G++ 
Sbjct: 117 LANIGSNRINTKVAADVMTTDIISCNPHDLLTKIWPILLTSNYSGLPVVTNADELQGMIT 176

Query: 332 FLDLLRFGII 341
             D++RFG I
Sbjct: 177 IRDIIRFGFI 186



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)

Query: 253 CVAVVDEGQKLKGIITEGDIFR------NFHKDLNTLS-----VEDVMIKNPKVILEDTL 301
            + VV    +L+G+IT  DI R             T +     V+ +M      +L DT 
Sbjct: 161 GLPVVTNADELQGMITIRDIIRFGFIRPAIGDKQQTQTKDVPSVDKIMSTPAYTVLSDTS 220

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   ++ +  +++  L VV+D  K IGIV   D+LR 
Sbjct: 221 VKECVEKMLHYDVGRLTVVND-GKVIGIVSRTDILRA 256



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V ++M K+   + E   +T A QL+R H +  L V D   K +GI+   D+L
Sbjct: 1   MKVNEIMSKDAVCVKEHDNMTHARQLMRDHFLRGLPVTDANGKMVGILKDQDIL 54



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 46/113 (40%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  VK    +  A  ++ +     + V D   K+ GI+ + DI  N     + +++
Sbjct: 7   MSKDAVCVKEHDNMTHARQLMRDHFLRGLPVTDANGKMVGILKDQDIL-NITSTRSNVTI 65

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
              +   P  I   T +  A +L+ +  +    +V  +  ++ +GI+   D+L
Sbjct: 66  GGFVHDCPL-ITPKTDIMDAARLIIESGVGRCPIVRSETEREIVGILSNSDIL 117



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 27/75 (36%), Gaps = 4/75 (5%)

Query: 204 FYVLHP--GGKLGTLFVCASDV-MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           F  + P  G K  T       V          V     + + +  +     G + VV++ 
Sbjct: 183 FGFIRPAIGDKQQTQTKDVPSVDKIMSTPAYTVLSDTSVKECVEKMLHYDVGRLTVVND- 241

Query: 261 QKLKGIITEGDIFRN 275
            K+ GI++  DI R 
Sbjct: 242 GKVIGIVSRTDILRA 256


>gi|330720118|gb|EGG98524.1| Inosine monophosphate dehydrogenase-related protein [gamma
           proteobacterium IMCC2047]
          Length = 137

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL----SVEDVM 289
           +    L +AI  L         V+D  ++L G+++EGD      KD+        V D M
Sbjct: 19  RPETDLFEAIEALKTNGISGAPVIDGNEQLVGLLSEGDCLDAIIKDIYYTEAGGKVSDYM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   I  +  +       ++  +    V+DD  + +G +   D+LR 
Sbjct: 79  TTDVATISPEDDIVDVAVEFKKRGLKRFPVIDD-GELVGQISQRDILRA 126



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L ++ V D M K       +T L  A++ L+ + IS   V+D  ++ +G++   D L  
Sbjct: 2   LKSIKVRDYMTKRLVTFRPETDLFEAIEALKTNGISGAPVIDGNEQLVGLLSEGDCLDA 60


>gi|296132180|ref|YP_003639427.1| CBS domain containing membrane protein [Thermincola sp. JR]
 gi|296030758|gb|ADG81526.1| CBS domain containing membrane protein [Thermincola potens JR]
          Length = 150

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 52/132 (39%), Gaps = 28/132 (21%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------------- 273
           +    + +   IL++K+   V VVDE  K+ GI+TE D+                     
Sbjct: 15  RPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLLVQTQKLKVPSYVQLLGGIIY 74

Query: 274 ----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
               + F +DL       V+D+M  +   + ED  +      +    I+ L VV      
Sbjct: 75  LDSVKEFEEDLRKAVAVQVKDIMTTDVVTVEEDAEIEDIATTMADEGINRLPVV-RDGAL 133

Query: 327 IGIVHFLDLLRF 338
           +GIV   D+++ 
Sbjct: 134 VGIVSRADIVKA 145



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M K       +  +    ++L    IS + VVD+  K +GIV   DLL
Sbjct: 1   MQAKDIMTKEVITARPEQTVREVAKILADKKISGVPVVDEAGKIVGIVTEADLL 54


>gi|86749274|ref|YP_485770.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
 gi|86572302|gb|ABD06859.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris HaA2]
          Length = 142

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V+    L  AI  L+E+R G V V+  G +L GI++E DI +       D     V  VM
Sbjct: 17  VEPDERLSAAIRTLAERRVGAVLVM-RGARLDGILSERDIVKVLADRGADALDGPVHAVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +      +   +   M+++       L V+++  + +G++   D+++
Sbjct: 76  TREVVTCAQGDTVGEIMEVMTSQKFRHLPVLENE-RVVGLISIGDIVK 122


>gi|52632000|gb|AAU85400.1| inosine-5'-monophosphate dehydrogenase [uncultured archaeon
           GZfos12E1]
          Length = 166

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 55/135 (40%), Gaps = 32/135 (23%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------------- 274
           K G  +   +      R     V+D+ +K+ GII+E DI +                   
Sbjct: 21  KPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIMKLTATVPFPDIDPLNPFPVF 80

Query: 275 ---NFHKDLNTLS----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
              ++ K +  +           V+DVM K    I  D  ++ A +L+ +++   + VVD
Sbjct: 81  SLSSYMKKVKKIPDEIETLFEGYVKDVMTKKTVTISPDNSISDAARLMHKNDFKRIPVVD 140

Query: 322 DCQKAIGIVHFLDLL 336
           D  K +G++   D++
Sbjct: 141 DEGKLVGVIARGDVI 155



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V+++M  +         +   ++  R + IS   V+DD +K IGI+   D+++ 
Sbjct: 6   NVKVKELMTTDVIAFKPGEKIPHVVKAFRTNRISGAPVIDDQRKVIGIISEADIMKL 62



 Score = 42.6 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                  +     + DA  ++ +  F  + VVD+  KL G+I  GD+   F K  ++  
Sbjct: 108 MTKKTVTISPDNSISDAARLMHKNDFKRIPVVDDEGKLVGVIARGDVIGVFAKYSHSKK 166


>gi|282162965|ref|YP_003355350.1| hypothetical protein MCP_0295 [Methanocella paludicola SANAE]
 gi|282155279|dbj|BAI60367.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 253

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/140 (16%), Positives = 50/140 (35%), Gaps = 13/140 (9%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             + + +     V        +      +     ++ EK    V ++D G  L G+++E 
Sbjct: 114 KDVLSHYSPEGTVGSIMSPPVVAPPDARVAYIRKLMIEKGVSRVPIMD-GTALVGMVSET 172

Query: 271 DIFRNF------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           D+                  ++  L   D+M         +  L  A +L+  ++I  L 
Sbjct: 173 DVANAMRSVKKHSPQSRQDNNVELLIAMDIMRSEVITARPEMPLKDAAKLMVDNDIGALP 232

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V D+    +G+V   D+++ 
Sbjct: 233 VKDEHGHLVGMVTRRDIVKA 252



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +   PL DA  ++ +   G + V DE   L G++T  DI + F
Sbjct: 211 RPEMPLKDAAKLMVDNDIGALPVKDEHGHLVGMVTRRDIVKAF 253



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + V+++M K   V+ +   ++ A+ L+ ++    L+V +      G++   
Sbjct: 1   MKVKEIMSKA-YVVDKSDRISEALDLMHKYRSRRLIVKNRDG-VQGVITLR 49


>gi|78355357|ref|YP_386806.1| hypothetical protein Dde_0310 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78217762|gb|ABB37111.1| CBS protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 615

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 4/133 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG    L              P +  G PL D I    ++    + VVD    LKGII+ 
Sbjct: 468 GGMEQNLLRSLKVGEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGIISF 527

Query: 270 GDIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQK 325
            D+      +     +   D+       + E   +  A+  + +  I+ L VV+  D ++
Sbjct: 528 RDLRAVLADEYPARLVIAGDIATTRLVTVTEGDSIQCALGRMSRSGIAQLPVVELGDARR 587

Query: 326 AIGIVHFLDLLRF 338
             GI+   D++  
Sbjct: 588 LKGILREKDVIHA 600



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)

Query: 271 DIFRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           DI     ++L  +L V + M  +P  I E T L   +   RQ ++S L VVD      GI
Sbjct: 465 DIAGGMEQNLLRSLKVGEFMRADPPTIWEGTPLHDVILAFRQRDVSYLHVVDREGGLKGI 524

Query: 330 VHFLDL 335
           + F DL
Sbjct: 525 ISFRDL 530


>gi|16077237|ref|NP_388050.1| transcriptional regulator [Bacillus subtilis subsp. subtilis str.
           168]
 gi|221307982|ref|ZP_03589829.1| hypothetical protein Bsubs1_00963 [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312305|ref|ZP_03594110.1| hypothetical protein BsubsN3_00880 [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317238|ref|ZP_03598532.1| hypothetical protein BsubsJ_00968 [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321501|ref|ZP_03602795.1| hypothetical protein BsubsS_00966 [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|32470614|sp|Q45581|YBBH_BACSU RecName: Full=Uncharacterized HTH-type transcriptional regulator
           ybbH
 gi|2632436|emb|CAB11945.1| putative transcriptional regulator [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 283

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 2/161 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + +++ +       +   AV  +      V   G+G SG +              
Sbjct: 100 TAGNAIQAIQDTSDLMDYKELERAVSLLLKAHT-VHFIGLGASGIVAKDAQQKWLRIHKQ 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +            +    +DD++  +S+SG + E+  +   A+   I  I++T  +++ V
Sbjct: 159 ATAFTDTHLVASLIANADKDDIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSV 218

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +  AD+ L             A T+S + QL I D L + +
Sbjct: 219 SALADVPLYTAH-SNEALIRSAATSSRLAQLFIIDVLFLGM 258


>gi|148261862|ref|YP_001235989.1| signal-transduction protein [Acidiphilium cryptum JF-5]
 gi|326405367|ref|YP_004285449.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
 gi|146403543|gb|ABQ32070.1| putative signal-transduction protein with CBS domains [Acidiphilium
           cryptum JF-5]
 gi|325052229|dbj|BAJ82567.1| hypothetical protein ACMV_32200 [Acidiphilium multivorum AIU301]
          Length = 145

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +     ++  V     + + + +L+EKR G V V      L GI++E D+ R+   +   
Sbjct: 8   LKRKPTALISVPPEARIREVVVVLAEKRIGAVVVQSPNSDLLGILSERDVVRSLAANGAA 67

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +    +M + P      T +  A  L+       L +VD   K +G+V   D+++
Sbjct: 68  TLEMEASQLMTRAPTTATPSTTVFEAENLMTDGRFRHLPIVD-GGKLVGVVSIGDVVK 124


>gi|325295193|ref|YP_004281707.1| signal transduction protein with CBS domains [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065641|gb|ADY73648.1| putative signal transduction protein with CBS domains
           [Desulfurobacterium thermolithotrophum DSM 11699]
          Length = 134

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS- 284
              +  ++    ++ A   + +K  G + ++D G K  GIIT+ DI  R         + 
Sbjct: 8   QRKVVTIEPEDSVMLAAQRMKDKMVGSLVILD-GDKPAGIITDRDIAIRVVGTGKTPKTL 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V++VM K+P  I ED       +  R   +  L+VVD   K IG++   D+L  
Sbjct: 67  VKEVMTKDPITIREDASFFELTKAFRDAAVRRLIVVDKNGKLIGLISIDDVLEL 120


>gi|319788280|ref|YP_004147755.1| CBS domain containing protein [Pseudoxanthomonas suwonensis 11-1]
 gi|317466792|gb|ADV28524.1| CBS domain containing protein [Pseudoxanthomonas suwonensis 11-1]
          Length = 137

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 46/117 (39%), Gaps = 9/117 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTL 283
               + +V     L +A   ++ +  GC+ V  E  +L GI+T+ D+  R   + L    
Sbjct: 7   MSRDVCVVSPSTSLQEAARQMAARDVGCLPV-GENDRLVGIVTDRDLVLRGISEGLGAKA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV------HFLD 334
            V +VM    K   ED  L      +       L V++   + +GIV      H  D
Sbjct: 66  EVREVMTPEVKYCFEDEDLDEVAANMAGLEKRRLPVLNRDMRLVGIVSLANFAHSHD 122



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + + DVM ++  V+   T L  A + +   ++  L V  +  + +GIV   DL+  GI
Sbjct: 1   MRIGDVMSRDVCVVSPSTSLQEAARQMAARDVGCLPV-GENDRLVGIVTDRDLVLRGI 57


>gi|295425813|ref|ZP_06818494.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
 gi|295064506|gb|EFG55433.1| conserved hypothetical protein [Lactobacillus amylolyticus DSM
           11664]
          Length = 282

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 12/200 (6%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK------- 59
            F+    +     +N      + +       L  LE SLQ  L+  F             
Sbjct: 65  DFQLQLAQDAPQKENDDFDTIVANGDTSTTVLLKLEKSLQQNLTE-FVKLNNTKEIGIAA 123

Query: 60  -IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            +      + + G+  SG     L   L   G  +F+      +       T  D++I+ 
Sbjct: 124 SLLQQADSIYLEGVAASGLPAKDLYYKLIRIGRKAFYDDDVHIALEQSYFTTPKDVMIIF 183

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S+SG ++E+      A     P+IAIT ++ S ++  A I+L LP   +    G     +
Sbjct: 184 SYSGQTEEILLAARQAHHNQTPIIAITRDSNSALSQLASIILPLPSNEQLLRVGAI---N 240

Query: 179 AIMQLAIGDALAIALLESRN 198
           ++        L    L +++
Sbjct: 241 SLFSEMTMSCLLYLCLIAKD 260


>gi|154151811|ref|YP_001405429.1| CBS domain-containing protein [Candidatus Methanoregula boonei 6A8]
 gi|154000363|gb|ABS56786.1| CBS domain containing protein [Methanoregula boonei 6A8]
          Length = 384

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 49/118 (41%), Gaps = 2/118 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +        +  V     L+  + ++   +     V  E   L G++T  D+ R    D
Sbjct: 262 VTVGEMMSTPVVSVPASMQLVKVVDMMYASKHLGFPVT-ERDTLVGMVTLADVNRTSPID 320

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + V+DVM +    +     +  A++++   NI  + ++ +  + +GIV   D+L+
Sbjct: 321 REAMQVKDVMTREVVTLPPTASVIDALRIMSARNIGRIPILQED-RIVGIVTRTDILK 377


>gi|226946014|ref|YP_002801087.1| inosine 5'-monophosphate dehydrogenase [Azotobacter vinelandii DJ]
 gi|226720941|gb|ACO80112.1| IMP dehydrogenase [Azotobacter vinelandii DJ]
          Length = 489

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKRFEAGVLR 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + D   +  +     V V+     L GI+T  D+   F   L    V +V
Sbjct: 96  DPITIDADATVRDLFELTRQHDISGVPVL-SRGDLVGIVTSRDVR--FETRL-DARVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E      A QLL +H I  +++VDD  +  G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKEEARQLLHKHRIERVLIVDDAFRLKGMMTVTDIEKAK 204


>gi|293365064|ref|ZP_06611781.1| CBS domain protein [Streptococcus oralis ATCC 35037]
 gi|307702227|ref|ZP_07639187.1| acetoin utilization protein acuB [Streptococcus oralis ATCC 35037]
 gi|331266737|ref|YP_004326367.1| CBS domain containing protein; involved in acetoin metabolism,
           putative [Streptococcus oralis Uo5]
 gi|291316514|gb|EFE56950.1| CBS domain protein [Streptococcus oralis ATCC 35037]
 gi|307624240|gb|EFO03217.1| acetoin utilization protein acuB [Streptococcus oralis ATCC 35037]
 gi|326683409|emb|CBZ01027.1| CBS domain containing protein; involved in acetoin metabolism,
           putative [Streptococcus oralis Uo5]
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|315612837|ref|ZP_07887748.1| CBS domain protein [Streptococcus sanguinis ATCC 49296]
 gi|315314947|gb|EFU62988.1| CBS domain protein [Streptococcus sanguinis ATCC 49296]
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|260599128|ref|YP_003211699.1| hypothetical protein CTU_33360 [Cronobacter turicensis z3032]
 gi|260218305|emb|CBA33285.1| hypothetical protein CTU_33360 [Cronobacter turicensis z3032]
          Length = 281

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/146 (22%), Positives = 63/146 (43%), Gaps = 3/146 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           AL +++ E   + +L  + Q         A + +    G V I G+  S  IG  L   L
Sbjct: 97  ALDALVEE--SVQALRDTAQLLDRAMLERAAQALHQA-GSVQIYGVAASAIIGEYLHYKL 153

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G P+        +  +   +   DL++ +S SGS+ +L   +  AR+   P++ +++
Sbjct: 154 LRLGKPAHLFSDMHRASMNATTLGERDLVVAISSSGSTRDLLHAVKLARKAGAPVLTLSN 213

Query: 147 ENKSVVACHADIVLTLPKEPESCPHG 172
             +S +A  +D++L   K       G
Sbjct: 214 TPRSPLASISDMLLVAAKPEGPLNAG 239


>gi|226509844|ref|NP_001148544.1| LOC100282160 [Zea mays]
 gi|195620250|gb|ACG31955.1| CBS domain containing protein [Zea mays]
 gi|223944943|gb|ACN26555.1| unknown [Zea mays]
 gi|268083268|gb|ACY95272.1| unknown [Zea mays]
          Length = 222

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 40/85 (47%), Gaps = 2/85 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + VVD G +  G+I + D  R  H   +   + +VM      +  D  +  A  L+ + 
Sbjct: 132 GLPVVDSGLRCVGVIVKNDRARASHG--SKTKISEVMTSPAITLSSDKTVMDAAVLMLKK 189

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
            I  L VV+  +K IGIV   D+LR
Sbjct: 190 KIHRLPVVNQDEKVIGIVTRADVLR 214



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 25/46 (54%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
              ++DA  ++ +K+   + VV++ +K+ GI+T  D+ R     L 
Sbjct: 176 DKTVMDAAVLMLKKKIHRLPVVNQDEKVIGIVTRADVLRVLEGMLK 221


>gi|84498468|ref|ZP_00997238.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
 gi|84381211|gb|EAP97095.1| hypothetical protein JNB_16459 [Janibacter sp. HTCC2649]
          Length = 142

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           V   GD++  V+    + D + +L+E R G V V D+GQ + GI++E DI R+  K   D
Sbjct: 7   VKRKGDTVITVRSDASVTDLLDLLAEHRIGAVVVSDDGQSVDGIVSERDIVRHLQKLGAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    V  +M         +  L      + +  I  + VV    +   IV   D+++
Sbjct: 67  VLGKPVSSIMTSEVATCAPEDELGALEHTMTELRIRHVPVV-VDGQLKAIVSIGDVVK 123


>gi|126732615|ref|ZP_01748412.1| CBS domain protein [Sagittula stellata E-37]
 gi|126706899|gb|EBA05968.1| CBS domain protein [Sagittula stellata E-37]
          Length = 144

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 4/116 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLS 284
           DS+  VK G  + DA  IL+EKR G V +  +G   +GI++E DI R    +     + +
Sbjct: 13  DSVYTVKPGTKVADAAKILAEKRIGTVVISSDGVVAEGILSERDIVRVLASNGAGCLSDA 72

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V+D M K              +  + +     + VV +  K +G++   D+++  +
Sbjct: 73  VDDYMTKKLVTCARGDNADAILATMTEGRFRHMPVV-EDGKMVGLITLGDVVKARL 127


>gi|83647622|ref|YP_436057.1| inosine-5'-monophosphate dehydrogenase [Hahella chejuensis KCTC
           2396]
 gi|83635665|gb|ABC31632.1| inosine-5'-monophosphate dehydrogenase [Hahella chejuensis KCTC
           2396]
          Length = 489

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H    +         V         
Sbjct: 41  NLPLVSAAMDTVTEARLAIALAQEGGIG-----IIHKNMTIEQQAAEVRMVKKFESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + +   I        + VVD G+ L GIIT  DI   F  +LN   V+++
Sbjct: 96  DPITVSPSNTVSEVRAITMANNISGLPVVD-GKDLVGIITGRDIR--FENNLNK-KVQEL 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E   +     LL +H I  ++VV++  +  G++   D+ + 
Sbjct: 152 MTPKEKLVTVTEGYDMETVKNLLHRHRIEKVLVVNNEFELKGLITLKDIQKA 203


>gi|313792029|gb|EFS40130.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL110PA1]
 gi|313802022|gb|EFS43256.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL110PA2]
 gi|313812831|gb|EFS50545.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL025PA1]
 gi|313838844|gb|EFS76558.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL086PA1]
 gi|314962683|gb|EFT06783.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL082PA1]
 gi|315077900|gb|EFT49951.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL053PA2]
 gi|327453253|gb|EGE99907.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL092PA1]
          Length = 293

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|283778594|ref|YP_003369349.1| CBS domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283437047|gb|ADB15489.1| CBS domain containing protein [Pirellula staleyi DSM 6068]
          Length = 169

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 44/102 (43%), Gaps = 2/102 (1%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDV 288
             +V  G  +   + +L+ +R G   VV E  +L GI TE D  +      +    V   
Sbjct: 35  PVVVAPGDSVARVLEVLAAERTGAAVVV-ERGQLLGIFTERDALKLMADGADLHQPVSVP 93

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M K+P  + +   L  A+ L+       L V+D   K +GI+
Sbjct: 94  MTKHPVTLRQTDTLARAISLMAGGGFRRLPVLDPSGKLLGIL 135


>gi|262165078|ref|ZP_06032815.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus VM223]
 gi|262024794|gb|EEY43462.1| inosine-5'-monophosphate dehydrogenase [Vibrio mimicus VM223]
          Length = 439

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 61/162 (37%), Gaps = 10/162 (6%)

Query: 181 MQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP 238
           M       LAIAL +     F   +  +     ++  + +  + V+        V+    
Sbjct: 1   MDTVTEARLAIALAQEGGIGFIHKNMSIEQQAAQVHQVKIFEAGVV---THPVTVRPEQT 57

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVI 296
           + D + +     F    VV E  +L GIIT  D+   F  DL T SV  VM        +
Sbjct: 58  IADVMELTYHHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAVMTPKERLATV 114

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 115 KEGASRAEVQEEMHKARVEKILVVNDEFQLKGMITAKDFHKA 156


>gi|15595447|ref|NP_248941.1| hypothetical protein PA0250 [Pseudomonas aeruginosa PAO1]
 gi|218888991|ref|YP_002437855.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
 gi|254237513|ref|ZP_04930836.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|254243349|ref|ZP_04936671.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9946090|gb|AAG03639.1|AE004463_4 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126169444|gb|EAZ54955.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|126196727|gb|EAZ60790.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|218769214|emb|CAW24974.1| putative CBS domain [Pseudomonas aeruginosa LESB58]
          Length = 144

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     ++DA+ +++EK  G + VV+   ++ G+++E D  R      +   
Sbjct: 11  KQNQQVYTIGADEMVLDALRLMAEKNIGALLVVN-HGEVVGVVSERDYARKMVLKGRSSI 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +M      +     +   M L+   ++  L VV +  + +G++   DL++  I
Sbjct: 70  GTPISAIMSAPVVSVDSKQSVDTCMNLMTDRHLRHLPVV-EDGQLLGLLSIGDLVKAAI 127


>gi|328956095|ref|YP_004373428.1| RpiR family transcriptional regulator [Coriobacterium glomerans
           PW2]
 gi|328456419|gb|AEB07613.1| transcriptional regulator, RpiR family [Coriobacterium glomerans
           PW2]
          Length = 285

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 6/172 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A     +  + L+  ++ L+         A + I   + R+   G+G S  + +    
Sbjct: 97  EIAASVFDSSIKSLTDTKAMLEE---ADIVAAADLIIHCE-RLSFYGMGGSSIVAADGFH 152

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
               T     +         +   +T  D  I +S SG S +   I     +   P+IAI
Sbjct: 153 KFMRTPIDVRYEADFHLQLMEAARLTDRDCAIAISHSGCSKQTIDIATMLEKRGCPVIAI 212

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           TS   S +A  + + L    E           +S I QLA+ D L   ++  
Sbjct: 213 TSNPASALARASTVALVTISEETGYRSESL--SSRISQLALIDTLYTMVMLH 262


>gi|317129926|ref|YP_004096208.1| signal transduction protein with CBS and DRTGG domains [Bacillus
           cellulosilyticus DSM 2522]
 gi|315474874|gb|ADU31477.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus cellulosilyticus DSM 2522]
          Length = 435

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 42/92 (45%), Gaps = 4/92 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           +        VVD+  K++GI+T  D+          + VE VM K P  +   T +  A 
Sbjct: 217 NRTGHSRYPVVDDNLKIQGIVTAKDVMGV----SPFIEVEKVMTKQPITVTSQTSVASAA 272

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +    I +L V+D  ++ +GI+   D+L+ 
Sbjct: 273 HRMVWEGIEILPVIDSGKRLLGIISRQDVLKA 304



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/78 (15%), Positives = 24/78 (30%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +  +                V     +  A   +  +    + V+D G++L GII+ 
Sbjct: 239 AKDVMGVSPFIEVEKVMTKQPITVTSQTSVASAAHRMVWEGIEILPVIDSGKRLLGIISR 298

Query: 270 GDIFRNFHKDLNTLSVED 287
            D+ +          V D
Sbjct: 299 QDVLKALQMLQRQPQVGD 316


>gi|218884709|ref|YP_002429091.1| glucosamine--fructose-6-phosphate aminotransferase [Desulfurococcus
           kamchatkensis 1221n]
 gi|218766325|gb|ACL11724.1| D-fructose-6-phosphate amidotransferase [Desulfurococcus
           kamchatkensis 1221n]
          Length = 612

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 70/160 (43%), Gaps = 5/160 (3%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA-STLASTGTPSFFVHA 98
           +L S++ G ++        K+ A   +V ITG G S H     A +T+  +G P     A
Sbjct: 271 ALRSTIHGLVNDVIIDEAVKLLADADKVFITGAGTSYHASEYFALTTMKLSGKPVIPFIA 330

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +E      G++   D++I +S SG + +    +   +     +I++T+   S +A  +DI
Sbjct: 331 SEYEVY-AGVVGSSDILIAVSQSGETMDTMKAVRAFKAKGCRIISLTNVVDSAIARESDI 389

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            L     PE    G+A T + + Q      ++I L     
Sbjct: 390 ALYTRAGPE---IGVAATKTFLTQTLFLSWISILLAGETG 426


>gi|218289151|ref|ZP_03493387.1| putative signal-transduction protein with CBS domains
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218240734|gb|EED07913.1| putative signal-transduction protein with CBS domains
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 240

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/131 (16%), Positives = 53/131 (40%), Gaps = 10/131 (7%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                V        +V+    + DA+  +  +  G + V D+  +L+G+++  D  +   
Sbjct: 103 WRDLRVGEVQSLPVIVRETTTVHDAVITMFLEDVGGLIVADDEGRLQGVVSRKDFLKFTL 162

Query: 278 KDLN--TLSVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVD---DCQKA---I 327
            + +  +L V  +M + P    +  D  +  A + + ++ +  L VV+   +  +    +
Sbjct: 163 GNASATSLPVGMIMTRYPHIETVTPDDRVVDAAKRMIEYKVDSLPVVEPSSEEGQPPIVV 222

Query: 328 GIVHFLDLLRF 338
           G +    L R 
Sbjct: 223 GRITKTTLARL 233


>gi|159905804|ref|YP_001549466.1| CBS domain-containing protein [Methanococcus maripaludis C6]
 gi|159887297|gb|ABX02234.1| CBS domain containing membrane protein [Methanococcus maripaludis
           C6]
          Length = 279

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 6/165 (3%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P T  +  +     +   L     ++   F   H         +         D++ L+K
Sbjct: 41  PGTGRVEGILTNMDIVDMLGGGSKYNLVKFKHNH----NMLSAINEPVKEIMTDNVVLIK 96

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               L + I +  +K+ G + V+D+   L   I E D+ +     ++  L V+D M +N 
Sbjct: 97  ENAELDEVIDLFVDKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENV 156

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   L    + + ++    L VV +  K +GI+   D ++ 
Sbjct: 157 VSATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKL 200



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 15/116 (12%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------LN 281
            G  L D    +    F  + VV E  KL GIIT  D  + F  D             + 
Sbjct: 161 PGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKLFGSDWAFNHMKTGNIREIT 219

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + ++D+M  +   +  D  L  A++ + + NI VL VV + +K IG++   D+++
Sbjct: 220 NVRMQDIMKTDIVSVTLDIKLIDAVKKMNELNIGVLPVV-EGEKLIGLITEKDIVK 274



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+ ++ ++    + VVD G  +++GI+T  DI                   
Sbjct: 15  VYPTTKIIEALEMMDKENIRRICVVDPGTGRVEGILTNMDIVDMLGGGSKYNLVKFKHNH 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+++M  N  +I E+  L   + L     I  + V+D     I  ++  D+
Sbjct: 75  NMLSAINEPVKEIMTDNVVLIKENAELDEVIDLFVDKKIGGMPVIDKSGVLITTINERDV 134

Query: 336 LRF 338
           +++
Sbjct: 135 IKY 137



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     I  V +   LIDA+  ++E   G + VV EG+K
Sbjct: 204 DWAFNHMKTGNIREITNVRMQDIMKTDIVSVTLDIKLIDAVKKMNELNIGVLPVV-EGEK 262

Query: 263 LKGIITEGDIFRNFHK 278
           L G+ITE DI +  +K
Sbjct: 263 LIGLITEKDIVKCIYK 278


>gi|55820457|ref|YP_138899.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           LMG 18311]
 gi|55736442|gb|AAV60084.1| acetoin utilization protein, truncated [Streptococcus thermophilus
           LMG 18311]
          Length = 139

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ +K    + V+ E  KL G+ITEG +                +  L
Sbjct: 8   VSPETTVATAADIIRDKGLRRLPVI-EHDKLVGLITEGTMAEASPSKATSLSIYEMNYLL 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V D+MIKN   + +   L  A+ ++ Q+ + VL VVD+ Q   GI+   D+   
Sbjct: 67  NKTKVGDIMIKNVLTVSKYASLEDAICIMLQNKVGVLPVVDNDQ-ISGIITDKDVFHA 123



 Score = 42.6 bits (99), Expect = 0.099,   Method: Composition-based stats.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V     L DAI I+ + + G + VVD   ++ GIIT+ D+F  F  +L   S
Sbjct: 82  VSKYASLEDAICIMLQNKVGVLPVVDND-QISGIITDKDVFHAFFGNLRIWS 132



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M K    +  +T +  A  ++R   +  L V++   K +G++ 
Sbjct: 1   MTKRVVNVSPETTVATAADIIRDKGLRRLPVIEHD-KLVGLIT 42


>gi|327472227|gb|EGF17664.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK408]
 gi|327488669|gb|EGF20469.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1058]
          Length = 280

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 7/193 (3%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ESCPHGLAPTTSAIMQLAIGDALAI 191
            A++     + +TS N   +    D ++ +  +   +  + ++P    ++ + I  A  I
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNISPQFPVLVVMDIFYAYYI 251

Query: 192 ALLESRNFSENDF 204
            L   R++    F
Sbjct: 252 DL--DRDYRSQIF 262


>gi|322374639|ref|ZP_08049153.1| CBS domain protein [Streptococcus sp. C300]
 gi|321280139|gb|EFX57178.1| CBS domain protein [Streptococcus sp. C300]
          Length = 218

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    I  DT +  A  L+R+  +  L V+++ Q  +G+V 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVAHAADLMREQGLHRLPVIENDQ-LVGLVT 48



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|289595777|ref|YP_003482473.1| CBS domain containing protein [Aciduliprofundum boonei T469]
 gi|289533564|gb|ADD07911.1| CBS domain containing protein [Aciduliprofundum boonei T469]
          Length = 169

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 55/127 (43%), Gaps = 21/127 (16%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHK-------- 278
            +P++     + D ++I+S +R   V +VD+    K+ GIITE D+              
Sbjct: 30  DMPILPKDASIEDVLSIMSARRH--VWIVDKKGSKKVIGIITEKDLLDILAPKRIQPYVI 87

Query: 279 ---DLNTL------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              DL +L        ED+M K   V   +  +  A+  +R   +  L VV++  + +G 
Sbjct: 88  GSIDLTSLLLGNVRKAEDIMCKKLIVAHPNDTIEDALDKMRSFRLRRLPVVNEKGELMGE 147

Query: 330 VHFLDLL 336
           +    L+
Sbjct: 148 LTIKSLI 154



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 10/72 (13%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKN----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-- 324
           DI     K+   + VE +M KN    P  + +D  +   + ++       + +VD     
Sbjct: 7   DIRYVL-KNFYRVPVEHIMTKNLWDMPI-LPKDASIEDVLSIMSARR--HVWIVDKKGSK 62

Query: 325 KAIGIVHFLDLL 336
           K IGI+   DLL
Sbjct: 63  KVIGIITEKDLL 74


>gi|237731891|ref|ZP_04562372.1| DNA-binding transcriptional regulator HexR [Citrobacter sp. 30_2]
 gi|226907430|gb|EEH93348.1| DNA-binding transcriptional regulator HexR [Citrobacter sp. 30_2]
          Length = 289

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL    +   + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVESYTGKIFESAMASLDHVRQSLD---NAAVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+I+++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDDDVIVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-PGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|332289188|ref|YP_004420040.1| DNA-binding transcriptional repressor RpiR [Gallibacterium anatis
           UMN179]
 gi|330432084|gb|AEC17143.1| DNA-binding transcriptional repressor RpiR [Gallibacterium anatis
           UMN179]
          Length = 266

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 3/143 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
             A +     K R +    G S  I   +       G                 ++T+DD
Sbjct: 105 EQAAKCFFNAKQRDLYAAGGSS-TICDDIFHKFLRIGIRCNSYRDIHLMMMSASLLTKDD 163

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++V+S SG + +L      A++    +I IT  N S +A  AD V+  P          
Sbjct: 164 VVLVVSHSGKTSDLLRATKIAKQNGAKIICITHSNISPIAELADFVICTPAPNTPLLGKN 223

Query: 174 APTTSAIMQLAIGDALAIALLES 196
           A  ++ I+QL + DA  +++ + 
Sbjct: 224 A--SARILQLILVDAFFVSVAKQ 244


>gi|324992677|gb|EGC24598.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK405]
 gi|324995794|gb|EGC27705.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK678]
 gi|327460080|gb|EGF06419.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1]
 gi|327467970|gb|EGF13460.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK330]
          Length = 280

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/193 (18%), Positives = 73/193 (37%), Gaps = 7/193 (3%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ESCPHGLAPTTSAIMQLAIGDALAI 191
            A++     + +TS N   +    D ++ +  +   +  + ++P    ++ + I  A  I
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNISPQFPVLVVMDIFYAYYI 251

Query: 192 ALLESRNFSENDF 204
            L   R++    F
Sbjct: 252 DL--DRDYRSQIF 262


>gi|288961970|ref|YP_003452280.1| transcriptional regulator [Azospirillum sp. B510]
 gi|288914250|dbj|BAI75736.1| transcriptional regulator [Azospirillum sp. B510]
          Length = 292

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 67/163 (41%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R +++L        +     A + + A + R+   G G SG +   +       G P+  
Sbjct: 111 RTIATLMQVRNNLPAEAVDRAADVLAAAR-RIEFYGSGNSGTVAEDIQRKFFRLGMPTVA 169

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
              +         +++ D ++ +S +G + ++   +  AR+    ++A+T  + S +A  
Sbjct: 170 YTDSHVYFASALTLSKGDAVVAVSSTGRTRDILDAVQNARKAGADVVALT-RSGSPLAEM 228

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           A + L      +   H  +P T  I  L +GD L+IA+     
Sbjct: 229 ATVSLVADVADDFDIH--SPMTVRIAHLVLGDILSIAVALRMG 269


>gi|119486852|ref|ZP_01620827.1| hypothetical protein L8106_11397 [Lyngbya sp. PCC 8106]
 gi|119456145|gb|EAW37278.1| hypothetical protein L8106_11397 [Lyngbya sp. PCC 8106]
          Length = 900

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVI 296
           PL+      S  +     VV E  KL GI+T+ D+     ++L     +   M   P  +
Sbjct: 481 PLLQVRQEFSRSQHRGFPVV-ENGKLVGIVTQRDLSNVSQQNLPEDTPLHKFMTSKPIAV 539

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF--GII 341
             D  LT  + LL ++  S L VV + +  +GI+   D+++   GI+
Sbjct: 540 TPDETLTQVLYLLGKYKPSRLPVV-EGRHLVGIITRSDIIKAELGIL 585


>gi|328468889|gb|EGF39849.1| hypothetical protein VP10329_14725 [Vibrio parahaemolyticus 10329]
          Length = 626

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--------DEGQKLKG 265
           G     A            ++    + +A ++++E+    + +V        ++  +L G
Sbjct: 144 GNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQLLG 203

Query: 266 IITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+ D+  R   + ++T +SV +VM  +   +  +  +  AM  + ++N+  L ++   
Sbjct: 204 ILTDRDLCIRVLAQGIDTNISVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPIL-KD 262

Query: 324 QKAIGIVHFLDLLRF 338
           +K IGI+   D++R+
Sbjct: 263 KKPIGIIGMTDIVRY 277



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQK 325
           R+   DL T     ++ ++P  +     +  A  L+ + N++ L++V        +D  +
Sbjct: 141 RSDGNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQ 200

Query: 326 AIGIVHFLDL 335
            +GI+   DL
Sbjct: 201 LLGILTDRDL 210


>gi|321313842|ref|YP_004206129.1| putative transcriptional regulator [Bacillus subtilis BSn5]
 gi|320020116|gb|ADV95102.1| putative transcriptional regulator [Bacillus subtilis BSn5]
          Length = 283

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 61/161 (37%), Gaps = 2/161 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + +++ +       +   AV  +      V   G+G SG +              
Sbjct: 100 TAGNAIQAIQDTSDLMDYKELERAVSLLLKAHT-VHFIGLGASGIVAKDAQQKWLRIHKQ 158

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +            +    +DD++  +S+SG + E+  +   A+   I  I++T  +++ V
Sbjct: 159 ATAFTDTHLVASLIANADKDDIVFAISFSGETQEIIELFAMAKEKGITTISLTQFSQTSV 218

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +  AD+ L             A T+S ++QL I D L + +
Sbjct: 219 SALADVPLYTAH-SNEALIRSAATSSRLVQLFIIDVLFLGM 258


>gi|296270672|ref|YP_003653304.1| CBS domain-containing membrane protein [Thermobispora bispora DSM
           43833]
 gi|296093459|gb|ADG89411.1| CBS domain containing membrane protein [Thermobispora bispora DSM
           43833]
          Length = 217

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 54/122 (44%), Gaps = 18/122 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FR------------ 274
           V+   PL+D +  L   R   V VVD  Q++ G++   D+       R            
Sbjct: 16  VRPDTPLLDVVNALRRFRVDAVPVVDHEQRVTGMVCISDLLPKPGTRRINGGFFEVLGGG 75

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +  N L+VE +M      + ED+ +   + L+ ++++  L VV    + +GIV  +D
Sbjct: 76  RLRRKANALTVEALMRTPAVTVTEDSTVQNVVALMEENHVDQLPVVQPDGRLVGIVRRID 135

Query: 335 LL 336
           LL
Sbjct: 136 LL 137



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V ++M +    +  DT L   +  LR+  +  + VVD  Q+  G+V   DLL
Sbjct: 2   AMQVREIMNRFVVAVRPDTPLLDVVNALRRFRVDAVPVVDHEQRVTGMVCISDLL 56



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 13/75 (17%), Positives = 27/75 (36%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+ +  GG+L       +           V     + + + ++ E     + VV    +L
Sbjct: 68  FFEVLGGGRLRRKANALTVEALMRTPAVTVTEDSTVQNVVALMEENHVDQLPVVQPDGRL 127

Query: 264 KGIITEGDIFRNFHK 278
            GI+   D+   F +
Sbjct: 128 VGIVRRIDLLSIFCR 142


>gi|296161736|ref|ZP_06844539.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
 gi|295888050|gb|EFG67865.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
          Length = 287

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    V     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGVPYASTAVARDDDVQTLMDKVGEAAVDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           +   + RV   G+G  SG +    A         S             G++   D+   +
Sbjct: 128 LSGAR-RVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVPSPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|258576037|ref|XP_002542200.1| inosine-5'-monophosphate dehydrogenase [Uncinocarpus reesii 1704]
 gi|237902466|gb|EEP76867.1| inosine-5'-monophosphate dehydrogenase [Uncinocarpus reesii 1704]
          Length = 551

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 69/189 (36%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P          AP  S+ M      ++AI +            V+H       
Sbjct: 73  SDVTLEAPITKRISL--KAPLVSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADD 125

Query: 216 LFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L    +     + +A  + ++  FG   V + G    KL GI+T
Sbjct: 126 QAEMVRKVKRFENGFILDPVVISPKTTVAEAKELKAQWNFGGFPVTENGTLRSKLVGIVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH +L    V  VM  +       T L  A ++LR+     L +VD+    + 
Sbjct: 186 SRDI--QFHTNLEE-PVTAVMSTDLVTAPAGTTLAEANEVLRRSKKGKLPIVDENGNLVS 242

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 243 LLSRTDLMK 251



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
             G  L +A  +L   + G + +VDE   L  +++  D+ +N H  L++ 
Sbjct: 211 PAGTTLAEANEVLRRSKKGKLPIVDENGNLVSLLSRTDLMKNLHYPLSSK 260


>gi|332290317|ref|YP_004421169.1| DNA-binding transcriptional repressor RpiR [Gallibacterium anatis
           UMN179]
 gi|330433213|gb|AEC18272.1| DNA-binding transcriptional repressor RpiR [Gallibacterium anatis
           UMN179]
          Length = 288

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 55/146 (37%), Gaps = 3/146 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            Q    V ++   K R+ + G+G SG     +   L   G            +    ++ 
Sbjct: 124 DQLDQVVNELYKAK-RIFLFGVGSSGITAEDVKHKLMRIGLQVDATTNNHFMYMQASLMK 182

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D++I +S SG S+E+   L  A++     +A+T   +S +   AD VL          
Sbjct: 183 AGDVVIGISHSGYSEEIIRALRIAKKAGAKTVALTHNLRSPITEEADYVLINGNRQG--Q 240

Query: 171 HGLAPTTSAIMQLAIGDALAIALLES 196
                  + I QL + D +   L+  
Sbjct: 241 MQGDSIGTKIAQLFVMDLIYALLVRK 266


>gi|325963150|ref|YP_004241056.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
 gi|323469237|gb|ADX72922.1| CBS domain-containing protein [Arthrobacter phenanthrenivorans
           Sphe3]
          Length = 137

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           V     L  A   + E   G + +  E  +LKG++T+ DI         D  T +  +  
Sbjct: 15  VGENETLEAAARKMKELDVGSLPICGEDNRLKGMLTDRDIVIKCLAEGGDPRTATAGEFG 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P  I  D  +  A++ ++ H +  L V+D     +G++   D+ +
Sbjct: 75  EGKPVTIGADDSIEEAIRTMQDHQVRRLPVIDGHN-LVGVLSQGDIAK 121



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  ++M    + + E+  L  A + +++ ++  L +  +  +  G++   D++
Sbjct: 2   ATAREIMTGGAECVGENETLEAAARKMKELDVGSLPICGEDNRLKGMLTDRDIV 55


>gi|312621454|ref|YP_004023067.1| signal transduction protein with cbs domains [Caldicellulosiruptor
           kronotskyensis 2002]
 gi|312201921|gb|ADQ45248.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor kronotskyensis 2002]
          Length = 123

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKFALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+H+IS + VVD+  K IG++   D++
Sbjct: 75  VITASQNDDIKQVAKLLREHDISAVPVVDN-GKVIGLIGLEDIV 117


>gi|73541445|ref|YP_295965.1| CBS [Ralstonia eutropha JMP134]
 gi|72118858|gb|AAZ61121.1| CBS [Ralstonia eutropha JMP134]
          Length = 155

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V     ++ A+ ++++K    V V+  G  L GI+++ D  R      +  +   V D+M
Sbjct: 22  VAPDDFVLAALQLMADKDISTVLVM-HGDTLAGILSQRDYARGVELAGRSASATKVRDIM 80

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D      + L+    I  L V+ +  +  G++   D+L  
Sbjct: 81  TTKVVCVSPDHTCDQCLALMHARRIRHLPVL-ESGRIAGVLSSHDILEE 128


>gi|323345900|gb|EGA80234.1| Imd2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 456

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|261821391|ref|YP_003259497.1| HexR family transcriptional regulator [Pectobacterium wasabiae
           WPP163]
 gi|261605404|gb|ACX87890.1| transcriptional regulator, RpiR family [Pectobacterium wasabiae
           WPP163]
          Length = 308

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL  ++SSL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 115 KIFESAMAGLEQVKSSLD---VAAVNRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFR 170

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              +  D+++++S +G +  L  +   AR     +IAITS+ 
Sbjct: 171 FNIPVVYFDDIVMQRMSCMNSSDGDVVVLISHTGRTKSLVEMAQLARENDATVIAITSDG 230

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
              +A  A + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 231 T-PLAREASLALRLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGEKFRD 282


>gi|77359305|ref|YP_338880.1| hypothetical protein PSHAa0338 [Pseudoalteromonas haloplanktis
           TAC125]
 gi|76874216|emb|CAI85437.1| conserved protein of unknown function; putative signaling protein
           [Pseudoalteromonas haloplanktis TAC125]
          Length = 842

 Score = 75.3 bits (184), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 48/107 (44%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
                PLIDA+ ++       + +  + Q++ G+ TE D  +    +  + + S++DVM 
Sbjct: 21  CSKHTPLIDAVKLMRAHNISAIFI-AQQQRILGVWTETDCLKLDFTNPAVTSTSIKDVMT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                +    LL+       QH +  L+V D+     G++   D++R
Sbjct: 80  SPVLSVPSQQLLSDTALTFHQHGVRHLLVTDNNNVPCGVISITDIVR 126



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           V     L D      +     + V D      G+I+  DI RN      L   ++ D   
Sbjct: 85  VPSQQLLSDTALTFHQHGVRHLLVTDNNNVPCGVISITDIVRNQGLDHYLQFRTINDQYT 144

Query: 291 KNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   I+  +L    A++L+R+ +  V++V +  QK  GI+   DLL+ 
Sbjct: 145 KN-ITIVPSSLALNEAVKLMRERSEKVILVFNQQQKEHGIITQRDLLQL 192



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +I +V     L +A+ ++ E+    + V ++ QK  GIIT+ D+ +   +        
Sbjct: 144 TKNITIVPSSLALNEAVKLMRERSEKVILVFNQQQKEHGIITQRDLLQLITRQSEQSVCW 203

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D+  +    I     L  A +L+    +  L+V D  +   G++    L+
Sbjct: 204 DLASRPLYKITPQDSLFDAYKLMLDSQVRHLVVSDKDE-IKGVLSLEHLI 252



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D+         + T L  A++L+R HNIS + +    Q+ +G+    D L+ 
Sbjct: 8   QKVGDIFTNKVITCSKHTPLIDAVKLMRAHNISAIFIA-QQQRILGVWTETDCLKL 62


>gi|89901066|ref|YP_523537.1| inosine-5'-monophosphate dehydrogenase [Rhodoferax ferrireducens
           T118]
 gi|89345803|gb|ABD70006.1| inosine-5'-monophosphate dehydrogenase [Rhodoferax ferrireducens
           T118]
          Length = 489

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 62/171 (36%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H            + V         
Sbjct: 40  KLPLVSAAMDTVTESRLAIAIAQEGGIG-----IVHKNMTPQQQAAKVAKVKRYESGVLR 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              ++     ++  + + ++       V D G K+ G++T  D+      DL    V  +
Sbjct: 95  DPVVITPQHTVLQVMDLSAQLGVSGFPVCD-GGKVVGLVTGRDLRFETRYDL---PVSHI 150

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + + T L  A  LL Q+ I  L+VV+D  +  G++   D+ +
Sbjct: 151 MTPRDKLVTVPDGTTLEQAKVLLNQYKIERLLVVNDAFELKGLITVKDITK 201


>gi|731323|sp|P39567|IMDH1_YEAST RecName: Full=Putative inosine-5'-monophosphate dehydrogenase IMD1;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|456156|gb|AAC09509.1| Yar073wp [Saccharomyces cerevisiae]
          Length = 403

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 74/183 (40%), Gaps = 19/183 (10%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
            +TL     S P      +     +A+ D +        N +  D            +  
Sbjct: 65  NITLNIPLVSSPMDTVTESEMATFMALLDGIG---FIHHNCTPEDQA---------DMVR 112

Query: 219 CASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFR 274
              +  +   + P+V      + +A ++  +  F    V  +G+   KL G IT  DI  
Sbjct: 113 RVKNYENGFINNPIVISPTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGAITSRDI-- 170

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F +D N+L V+DVM KNP    +   L+   ++L++     L+VVD+    + ++   D
Sbjct: 171 QFVED-NSLLVQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTD 229

Query: 335 LLR 337
           L++
Sbjct: 230 LMK 232


>gi|314915332|gb|EFS79163.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL005PA4]
          Length = 293

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|268325805|emb|CBH39393.1| putative chloride channel [uncultured archaeon]
          Length = 612

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 5/116 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + +  +     + +A+  +         VVD+  ++ GI +  D+ +   +      V  
Sbjct: 483 EDVQTISADTTVKEALYFVDRTGHIAYPVVDKEGRMVGITSLMDLEKQRKEGSVYRKVSL 542

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-----DDCQKAIGIVHFLDLLRF 338
           +  K   V   D  L  A+  +  +++  L VV     ++ ++ +GI+   D++R 
Sbjct: 543 ICTKEVLVAYPDEFLEDALHKMDIYHVGRLPVVKGRSEEENKELVGIISRADIIRE 598



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 273 FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLL-RQHNISVLMVVDDCQKAIGIV 330
            R F  DL   + V+D  I++ + I  DT +  A+  + R  +I    VVD   + +GI 
Sbjct: 464 RREFMVDLLEGIRVKDAYIEDVQTISADTTVKEALYFVDRTGHI-AYPVVDKEGRMVGIT 522

Query: 331 HFLDL 335
             +DL
Sbjct: 523 SLMDL 527


>gi|262165547|ref|ZP_06033284.1| Signal transduction protein [Vibrio mimicus VM223]
 gi|262025263|gb|EEY43931.1| Signal transduction protein [Vibrio mimicus VM223]
          Length = 629

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 66/186 (35%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAI----ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L      A+    +   + F       +   L                  
Sbjct: 93  SFAVTAIEDTLLYCIPEAIFHRLHEEFDSFADFVEVEQSARLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D         +   + GIITE D+ 
Sbjct: 153 KQLLTRPAPSIDKHASIQQAALRMADENLSALLILDNQILHDEEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAQGIDITQAVSQVMTYEVISLDHNAYVYEAMLAMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|325983665|ref|YP_004296067.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
 gi|325533184|gb|ADZ27905.1| putative signal transduction protein with CBS domains [Nitrosomonas
           sp. AL212]
          Length = 143

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNT 282
              ++ L+     L +A   + +   G + V  E   L+GIIT+ DI  R     +D   
Sbjct: 10  MERNLKLINADATLEEASIKMKQAGCGFLPVGVEN-TLEGIITDRDIVVRAIAEGRDPTR 68

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V D M        E   L  A Q++ ++++S L+V D+     GI+ F  ++R
Sbjct: 69  EIVRDYMTSTVCCCKESDTLKDAAQVMSENHVSRLVVKDENDNICGILTFGRIIR 123



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 23/50 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +   ++   K    L DA  ++SE     + V DE   + GI+T G I R
Sbjct: 74  YMTSTVCCCKESDTLKDAAQVMSENHVSRLVVKDENDNICGILTFGRIIR 123


>gi|229490113|ref|ZP_04383961.1| RpiR-family transcriptional regulator [Rhodococcus erythropolis
           SK121]
 gi|229322989|gb|EEN88762.1| RpiR-family transcriptional regulator [Rhodococcus erythropolis
           SK121]
          Length = 291

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
             L+ + Q          V +I++ + RV + GIG SG +   L   L+           
Sbjct: 117 EQLKGTAQLTDPAALEEVVSRIRSAR-RVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLD 175

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +A+     ++  DD+ + +S SG + ++   L  ARR      AIT   +S +A  +  
Sbjct: 176 RDAAMVSASLLGPDDIAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHH 235

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           VL             A   S   QL + D +   +  S
Sbjct: 236 VLLT--AGREFGFRSAAMASRTGQLLVVDTIFAMVAHS 271


>gi|124485572|ref|YP_001030188.1| hypothetical protein Mlab_0750 [Methanocorpusculum labreanum Z]
 gi|124363113|gb|ABN06921.1| CBS domain containing protein [Methanocorpusculum labreanum Z]
          Length = 291

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 44/103 (42%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + +A  IL E   G   +++    + GI+TE D+ R      + L V+++M   P
Sbjct: 107 SPATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDLMRMLAGTESELVVDEIMTPCP 166

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K +  D  L+   + +       L VV      +G++   D++
Sbjct: 167 KKVSPDLPLSNVTKQIVDDGYRRLPVV-KDGILLGMITATDIM 208



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 46/130 (35%), Gaps = 16/130 (12%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
                     V    PL +    + +  +  + VV +   L G+IT  DI          
Sbjct: 159 DEIMTPCPKKVSPDLPLSNVTKQIVDDGYRRLPVV-KDGILLGMITATDIMGYLGNGRVF 217

Query: 280 ----------LNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                     + +L V DVM   + + +  D  +++  Q +    I    V+D   K  G
Sbjct: 218 SEMHTGTVDEVLSLPVRDVMTASDIRTVATDMPISIVAQEMLNRGIGAFPVMD-GGKLSG 276

Query: 329 IVHFLDLLRF 338
           IV   DL++ 
Sbjct: 277 IVTEFDLVKA 286



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 44/122 (36%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+ I ++S   F  + + D G +KL GI+T  D+                   
Sbjct: 26  VPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGIVTITDVIDMMGGGSRYNLIANKHKG 85

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   S+ ++  +N       T +  A  +L +       +++      GIV   DL
Sbjct: 86  NLLAALNESLREIATENVTGFSPATTVKEAANILLETGHGGFPILNPDSTIAGIVTEYDL 145

Query: 336 LR 337
           +R
Sbjct: 146 MR 147



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           SV D+   N   +     +   +Q++ +HN   L + D   +K IGIV   D++
Sbjct: 14  SVLDIASLNVISVPPTMSIIEGIQMMSRHNFRRLPITDPGTKKLIGIVTITDVI 67



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 21/73 (28%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  +H G     L +   DVM +   I  V    P+      +  +  G   V+D G KL
Sbjct: 217 FSEMHTGTVDEVLSLPVRDVM-TASDIRTVATDMPISIVAQEMLNRGIGAFPVMD-GGKL 274

Query: 264 KGIITEGDIFRNF 276
            GI+TE D+ +  
Sbjct: 275 SGIVTEFDLVKAL 287


>gi|1944008|dbj|BAA19503.1| YbbH [Bacillus subtilis]
          Length = 305

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 60/161 (37%), Gaps = 2/161 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
                + +++ +       +   AV  +      V   G+G SG +              
Sbjct: 122 TAGNAIQAIQDTSDLMDYKELERAVSLLLKAHT-VHFIGLGASGIVAKDAQQKWLRIHKQ 180

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +            +    +DD++  +S+SG + E+  +   A+   I  I++T  +++ V
Sbjct: 181 ATAFTDTHLVASLIANADKDDIVFAISFSGETQEIVELFAMAKEKGITTISLTQFSQTSV 240

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +  AD+ L             A T+S + QL I D L + +
Sbjct: 241 SALADVPLYTAH-SNEALIRSAATSSRLAQLFIIDVLFLGM 280


>gi|229817766|ref|ZP_04448048.1| hypothetical protein BIFANG_03038 [Bifidobacterium angulatum DSM
           20098]
 gi|229785555|gb|EEP21669.1| hypothetical protein BIFANG_03038 [Bifidobacterium angulatum DSM
           20098]
          Length = 183

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 58/152 (38%), Gaps = 8/152 (5%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     RV   G G+SG      A  +   G  S+ +                D+++ +S
Sbjct: 33  LITKNSRVYAAGEGRSGFQARSFAMRMMHIGYTSYMMGETICPSMH-----EGDVLLAIS 87

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG +         A++  + +IA+TS+  S +A  AD V+ +P   +    G     S+
Sbjct: 88  GSGKTRRTVEDAEAAKKLGVKVIAVTSKPDSPLADAADAVIVVPGRVKGETGGSIQLLSS 147

Query: 180 I---MQLAIGDALAIALLESRNFSENDFYVLH 208
           +         DAL + L    N S+ D    H
Sbjct: 148 LFDQSVHIALDALCLMLSRRDNVSDADANANH 179


>gi|332796600|ref|YP_004458100.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332694335|gb|AEE93802.1| putative signal-transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 127

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---NTLSVEDV 288
            V+    L +   ++ E+  G V V  E    KGI T+ D  +         + + V   
Sbjct: 14  QVEANTSLQEVCKLMLERGIGSVLVT-ENGVPKGIFTDRDAVKAIASGFSPSDEVRVAAT 72

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  N  ++  +T +  A+ ++ ++ I  L V D     +GI+  +D  + 
Sbjct: 73  MG-NLIIVDLNTDIVEAVSIMTKNKIRHLPVKDSEGNIVGILSIVDASKA 121



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV+D M      +  +T L    +L+ +  I  ++V  +     GI    D ++ 
Sbjct: 3   SVKDYMTTPVFQVEANTSLQEVCKLMLERGIGSVLVT-ENGVPKGIFTDRDAVKA 56



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 18/120 (15%), Positives = 46/120 (38%), Gaps = 4/120 (3%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLF 217
            +T P         L      +++  IG  L       +  F++ D       G   +  
Sbjct: 7   YMTTPVFQVEANTSLQEVCKLMLERGIGSVLVTENGVPKGIFTDRDAVKAIASGFSPSDE 66

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V  +    +  ++ +V +   +++A++I+++ +   + V D    + GI++  D  +   
Sbjct: 67  VRVAA---TMGNLIIVDLNTDIVEAVSIMTKNKIRHLPVKDSEGNIVGILSIVDASKAIQ 123


>gi|323126676|gb|ADX23973.1| hypothetical protein SDE12394_02155 [Streptococcus dysgalactiae
           subsp. equisimilis ATCC 12394]
          Length = 220

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ +K    + V+ E  +L G++TEG +                +  L
Sbjct: 14  ISPEESVAHAADLMRDKGLRRLPVI-EKGQLVGLVTEGTMADASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MI+    +  D  L  A+  +  + + VL VV    + +GI+   D+ + 
Sbjct: 73  NKTKIRDIMIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKA 129



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M K    I  +  +  A  L+R   +  L V++   + +G+V 
Sbjct: 1   MSVKDYMTKEVISISPEESVAHAADLMRDKGLRRLPVIEK-GQLVGLVT 48



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+    L DAI  +   + G + VV +  ++ GIIT+ D+F+ F
Sbjct: 81  MIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKAF 130


>gi|322384348|ref|ZP_08058046.1| oxidoreductase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321150850|gb|EFX44287.1| oxidoreductase-like protein [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 131

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +  V +   + +    + +   G + VV EG KL G++T+ D+       K   + 
Sbjct: 1   MSTDMVTVGLEDNVYEIAVKMKKHDIGFIPVV-EGNKLIGVVTDRDLVLRGYAEKRSGSA 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V++VM     VI        A Q++ +  +  L V  +  + IG+V   DL
Sbjct: 60  AVKEVMSDEVTVIPPSMSFDEAAQIMAKSQVRRLPVA-ENGELIGVVSLGDL 110



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M  +   +  +  +      +++H+I  + VV +  K IG+V   DL+
Sbjct: 1   MSTDMVTVGLEDNVYEIAVKMKKHDIGFIPVV-EGNKLIGVVTDRDLV 47


>gi|284166925|ref|YP_003405204.1| signal transduction protein with CBS domains [Haloterrigena
           turkmenica DSM 5511]
 gi|284016580|gb|ADB62531.1| putative signal transduction protein with CBS domains
           [Haloterrigena turkmenica DSM 5511]
          Length = 141

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               L      L+    G   VV EG++  GI+T+ DI     +  D+     EDVM   
Sbjct: 16  PNTELETVAQRLASNNVGAA-VVTEGEEPVGIVTDRDIALEVAQSDDVAATPAEDVMTAG 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + ED       + +++ N     VVD+  +  GIV   DL+
Sbjct: 75  LTTLQEDADAIEVSRAIKEENARRFPVVDENGELTGIVTLDDLV 118


>gi|159029312|emb|CAO90178.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
          Length = 390

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 29/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE--------------------GQKLKGIITEGDI 272
           V     L DAI ++ +       + D+                    GQ+L GI+TE D+
Sbjct: 27  VPPTTSLADAIAMIGQAYSRLCLLTDDLSPLAAPAGEARVSCLLVVQGQELLGILTERDV 86

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTV---AMQLLRQHNISVLMVVDDCQKAI 327
            R   + +N    +V DVM  +P + L          A+ L R++ I  L +VDD  + +
Sbjct: 87  VRLTAQGINLTETTVADVM-VHPLITLPQQSAQDIFAALFLFRRYRIRHLPIVDDQGQLV 145

Query: 328 GIV---HFLDLLR 337
           G++       +LR
Sbjct: 146 GVISHESIRQILR 158



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFR--NFHKD 279
               +    +   ++    +++E R  CV +     ++     GI+TE D+ +      D
Sbjct: 172 MTTQVVQAPLTATVLQLAQLMAEHRVSCVVITQRNSEDNDYPVGIVTERDLVQFQAVQID 231

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+    + VM     ++  +  L  A Q +++  +  L+V  +  + +GIV    LLR
Sbjct: 232 LHKTRAQTVMSTPLFLLNPEDSLWTAHQEMQKRRVGRLVVSWNWGRGLGIVTQTSLLR 289



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 42/115 (36%), Gaps = 10/115 (8%)

Query: 173 LAPTTSAIMQLAI---GDALAIALLESRNFSENDF-------YVLHPGGKLGTLFVCASD 222
            AP T+ ++QLA       ++  ++  RN  +ND+         L     +         
Sbjct: 178 QAPLTATVLQLAQLMAEHRVSCVVITQRNSEDNDYPVGIVTERDLVQFQAVQIDLHKTRA 237

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                  + L+     L  A   + ++R G + V     +  GI+T+  + R F 
Sbjct: 238 QTVMSTPLFLLNPEDSLWTAHQEMQKRRVGRLVVSWNWGRGLGIVTQTSLLRVFD 292


>gi|148360054|ref|YP_001251261.1| hypothetical protein LPC_1985 [Legionella pneumophila str. Corby]
 gi|296108125|ref|YP_003619826.1| hypothetical protein lpa_03631 [Legionella pneumophila 2300/99
           Alcoy]
 gi|148281827|gb|ABQ55915.1| hypothetical protein LPC_1985 [Legionella pneumophila str. Corby]
 gi|295650027|gb|ADG25874.1| hypothetical protein lpa_03631 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 149

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 54/119 (45%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIF---RNFHKD 279
               + ++     +  A  ++     G + +V+E    +   GI+T+ D+         +
Sbjct: 7   CNRDVVIINGDESVKQAAELMRTHHVGDIVLVEELKGHRVPIGIVTDRDLVVEVMALDVN 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L+V+D++ ++  V  E+  L  +++ +++  +  L VVD+  + +GI+   D+   
Sbjct: 67  PEELAVQDIITRSVLVAREEDSLIDSLEFMKEKGVRRLPVVDNDHELVGIITIDDITEL 125



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           + +    LID++  + EK    + VVD   +L GIIT  DI     + L+ 
Sbjct: 82  VAREEDSLIDSLEFMKEKGVRRLPVVDNDHELVGIITIDDITELLAEMLHK 132



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
           + + +   ++  +I  D  +  A +L+R H++  +++V++    +  IGIV   DL+
Sbjct: 1   MRIGEFCNRDVVIINGDESVKQAAELMRTHHVGDIVLVEELKGHRVPIGIVTDRDLV 57


>gi|260901011|ref|ZP_05909406.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
 gi|308110849|gb|EFO48389.1| nucleotidyltransferase family protein [Vibrio parahaemolyticus
           AQ4037]
          Length = 626

 Score = 74.9 bits (183), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 63/135 (46%), Gaps = 11/135 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--------DEGQKLKG 265
           G     A            ++    + +A ++++E+    + +V        ++  +L G
Sbjct: 144 GNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQLLG 203

Query: 266 IITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+ D+  R   + ++T +SV +VM  +   +  +  +  AM  + ++N+  L ++   
Sbjct: 204 ILTDRDLCIRVLAQGIDTNISVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPIL-KD 262

Query: 324 QKAIGIVHFLDLLRF 338
           +K IGI+   D++R+
Sbjct: 263 KKPIGIIGMTDIVRY 277



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQK 325
           R+   DL T     ++ ++P  +     +  A  L+ + N++ L++V        +D  +
Sbjct: 141 RSDGNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQ 200

Query: 326 AIGIVHFLDL 335
            +GI+   DL
Sbjct: 201 LLGILTDRDL 210


>gi|256546045|ref|ZP_05473399.1| RpiR family phosphosugar-binding transcriptional regulator
           [Anaerococcus vaginalis ATCC 51170]
 gi|256398339|gb|EEU11962.1| RpiR family phosphosugar-binding transcriptional regulator
           [Anaerococcus vaginalis ATCC 51170]
          Length = 297

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 64/158 (40%), Gaps = 3/158 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + S+ +  +   +  F   +  IK  K ++   G+G S  I          T     ++ 
Sbjct: 121 IQSMYTLKEDIKNIPFESCLNLIKKSK-KIHFFGMGGSATIAYDSYHKFLRTKYMVNYIS 179

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         + ++D I V S SG + E+  +   A++    +IA+T   KS +   +D
Sbjct: 180 DSHMQLSACTKMDQNDCIFVFSHSGRTLEVIEVSKVAKKNKAKIIALTGNPKSEMVKISD 239

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             + LP       HG     + I+ L + D L I+L+ 
Sbjct: 240 EAMILPSIESE--HGTESLNARILYLTVMDILLISLMY 275


>gi|187921835|ref|YP_001890867.1| RpiR family transcriptional regulator [Burkholderia phytofirmans
           PsJN]
 gi|187720273|gb|ACD21496.1| transcriptional regulator, RpiR family [Burkholderia phytofirmans
           PsJN]
          Length = 287

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/200 (21%), Positives = 73/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGLPYASTAVARDDDVQTLMDKVGEAAVDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A         S             G++   D+   +
Sbjct: 128 LSSAR-RVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVPSPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|239828063|ref|YP_002950687.1| hypothetical protein GWCH70_2731 [Geobacillus sp. WCH70]
 gi|239808356|gb|ACS25421.1| CBS domain containing membrane protein [Geobacillus sp. WCH70]
          Length = 214

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 11/125 (8%)

Query: 222 DVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---- 275
            ++      P+V  +    + +AI ++ + R   + +VD    + GI+T+ DI       
Sbjct: 1   MIVEQIMKTPVVTLQPTNTIAEAIQLVRQLRIRHIPIVDAENHVIGIVTDRDIRDASPSI 60

Query: 276 --FHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              H+ L  L   +  +M  +  V      +     L  +H IS L +V    K +GIV 
Sbjct: 61  FRIHEHLEDLQKPLSTIMKTDVIVGHPLDFVEEIAALFYEHKISCLPIV-QDGKLVGIVT 119

Query: 332 FLDLL 336
             DLL
Sbjct: 120 ETDLL 124


>gi|320449537|ref|YP_004201633.1| CBS domain-containing protein [Thermus scotoductus SA-01]
 gi|320149706|gb|ADW21084.1| CBS domain containing protein [Thermus scotoductus SA-01]
          Length = 295

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 6/99 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +A  +++  R G + V+ E   L G++T  D+ R  H +   L V       
Sbjct: 15  VSPWASVREAANLMARHRIGSLPVL-EDGILLGVVTSRDL-RGVHPNRVVLDVLQG---P 69

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           P  I  +T L  A  L+++  +  L+V     K +GI+ 
Sbjct: 70  PLTIPPETNLLEAQALMQEKAVERLLVA-KEGKLVGILT 107



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V++VM  +   +     +  A  L+ +H I  L V+ +    +G+V   DL
Sbjct: 2   AKVKEVMTASLVTVSPWASVREAANLMARHRIGSLPVL-EDGILLGVVTSRDL 53


>gi|313886687|ref|ZP_07820397.1| putative inosine-5'-monophosphate dehydrogenase [Porphyromonas
           asaccharolytica PR426713P-I]
 gi|312923849|gb|EFR34648.1| putative inosine-5'-monophosphate dehydrogenase [Porphyromonas
           asaccharolytica PR426713P-I]
          Length = 500

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 66/185 (35%), Gaps = 16/185 (8%)

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           ++ +A ++      P + ES  +   P  SAIMQ    D +AIAL  +RN   +  +   
Sbjct: 34  RTPLAKYS------PAKEESRINLNIPFVSAIMQSVSNDTMAIAL--ARNGGLSFIFGSQ 85

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
           P  +   +                 V     L D + I        + V D+      L 
Sbjct: 86  PIEEEAEMVARVKKFKAGFVRSDANVSPKDTLADVLAITQRTGHSTIGVTDDGTPDGVLC 145

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D       D     V D M          +   L+ A  ++  H ++ L ++D+
Sbjct: 146 GIVTSRDYR--LSTDSLDRKVADFMTPFERLTTGRKGISLSEANDIIWAHKLNALPIIDE 203

Query: 323 CQKAI 327
            Q+  
Sbjct: 204 EQRLC 208


>gi|254520782|ref|ZP_05132838.1| phosphosugar-binding transcriptional regulator [Clostridium sp.
           7_2_43FAA]
 gi|226914531|gb|EEH99732.1| phosphosugar-binding transcriptional regulator [Clostridium sp.
           7_2_43FAA]
          Length = 266

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 3/146 (2%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
             V +IK  K  + I G+G SG    ++   L   G     +  +     +  +++ +DL
Sbjct: 111 KVVNEIKKAKN-IYIYGVGSSGLTCKEMMQRLLRMGFNVHCISDSHMMIINSSIVSENDL 169

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S SG + E+   L  ++     +++IT    S V+ ++DI   +            
Sbjct: 170 VIGISISGETQEVIHSLRKSKENGAKIVSITGFEGSTVSKYSDIKFIVYNPNFVDR--SR 227

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS 200
              +    + + D +++ LL+  N S
Sbjct: 228 FINTQFSAMYLLDLISMVLLKDINLS 253


>gi|218514828|ref|ZP_03511668.1| arabinose 5-phosphate isomerase protein (involved in capsule
           formation) [Rhizobium etli 8C-3]
          Length = 66

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/65 (46%), Positives = 44/65 (67%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++L  L+V+D+M K PK +    L T A+ LL QH+I  L+VVDD ++ +G+VHF DL
Sbjct: 1   LTRNLAELAVDDIMTKTPKTVKPTMLATAALALLNQHSIGALIVVDDDRRPLGLVHFHDL 60

Query: 336 LRFGI 340
           LR G+
Sbjct: 61  LRIGV 65


>gi|194014891|ref|ZP_03053508.1| YlbB [Bacillus pumilus ATCC 7061]
 gi|194013917|gb|EDW23482.1| YlbB [Bacillus pumilus ATCC 7061]
          Length = 149

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +   +      +A   + E   G + VV+ G +L GI+T+ D+       K  N+ 
Sbjct: 10  MTKKVVTCQQDDNTYEAAVKMREADIGAIPVVN-GDQLVGIVTDRDLVLRGIAEKKPNSQ 68

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  +M K      ED  L   ++L+ +H +  + VV       GIV   DL
Sbjct: 69  EVGSLMTKEVLTAEEDATLEEIVRLMSEHQLRRIPVV-KNGALTGIVALGDL 119



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + T  ++D+M K      +D     A   +R+ +I  + VV+  Q  +GIV   DL+  G
Sbjct: 1   MKTKKIKDIMTKKVVTCQQDDNTYEAAVKMREADIGAIPVVNGDQ-LVGIVTDRDLVLRG 59

Query: 340 I 340
           I
Sbjct: 60  I 60


>gi|68053500|gb|AAY85170.1| CBS domain-like protein [Leptospirillum ferriphilum]
          Length = 157

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 50/138 (36%), Gaps = 28/138 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
                  ++   P+ D   +L   R   V VVD   +L G++T  D+      +      
Sbjct: 7   MTPDPVTIQPETPVEDIARLLLAHRINGVPVVDGAGRLIGVVTAEDLIHRGADERLEPRE 66

Query: 284 -------------------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                    +  +VM      +      +VA +L+  H+++ L 
Sbjct: 67  SIWKENFWVSFLGPKGTQRDKAEGRTAAEVMTTEVHSVTPAMHPSVAARLMVDHHLTALP 126

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVDD  K IG++  +DLL
Sbjct: 127 VVDD-GKVIGVISRIDLL 143



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + + M  +P  I  +T +    +LL  H I+ + VVD   + IG+V   DL+  G
Sbjct: 3   IRNFMTPDPVTIQPETPVEDIARLLLAHRINGVPVVDGAGRLIGVVTAEDLIHRG 57


>gi|82701472|ref|YP_411038.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
 gi|82409537|gb|ABB73646.1| putative signal-transduction protein with CBS domains [Nitrosospira
           multiformis ATCC 25196]
          Length = 147

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           ++    + +A+ +++ K  G + V+    KL GI TE D  R   +  +    + V+++M
Sbjct: 18  IEPDKSVYEAMHLMAAKNIGALLVL-HRGKLVGIFTERDYSRKAYSLDRLAKDIQVKELM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +  D      M L+ +     L V+    K +GI+   DL++
Sbjct: 77  TAQVAYVSPDYSTEDCMALVTKTRARHLPVL-ANGKVMGIISIGDLVK 123


>gi|295695267|ref|YP_003588505.1| CBS domain containing protein [Bacillus tusciae DSM 2912]
 gi|295410869|gb|ADG05361.1| CBS domain containing protein [Bacillus tusciae DSM 2912]
          Length = 214

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 50/119 (42%), Gaps = 10/119 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDL- 280
              ++  V     L DA+ +   +R   + VV E ++L GI+++ D+          D  
Sbjct: 7   MTRNVVTVTPETALTDALQLTRLRRIRHLPVV-ENERLVGIVSDRDMRDVCPSILDPDWE 65

Query: 281 ---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                L +E  M ++   +     +  A   + +  +S L V+D   + +GI+   D+L
Sbjct: 66  VKVRGLRIEACMKRDVVTVEPWNFIEDAAAEMYRRKVSCLPVLD-QNRVVGILTERDIL 123



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE +M +N   +  +T LT A+QL R   I  L VV++  + +GIV   D+
Sbjct: 3   VEQIMTRNVVTVTPETALTDALQLTRLRRIRHLPVVENE-RLVGIVSDRDM 52



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 37/108 (34%), Gaps = 9/108 (8%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                             +  V+    + DA   +  ++  C+ V+D   ++ GI+TE D
Sbjct: 63  DWEVKVRGLRIEACMKRDVVTVEPWNFIEDAAAEMYRRKVSCLPVLD-QNRVVGILTERD 121

Query: 272 IFRNFHKDLNTLSVE---DVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           I       +  L      +V + N        L  VA  +LR   I+ 
Sbjct: 122 ILHTLLGMMGVLEPSSRIEVELPN----RPGGLADVA-DVLRARRINA 164


>gi|257387093|ref|YP_003176866.1| peptidase M50 [Halomicrobium mukohataei DSM 12286]
 gi|257169400|gb|ACV47159.1| peptidase M50 [Halomicrobium mukohataei DSM 12286]
          Length = 395

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 51/120 (42%), Gaps = 1/120 (0%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +DVM   D +  V     + + I  + E+R     V +   ++ G++T  D       
Sbjct: 252 TVADVMTPADRVTTVDPDTKVRELIRTMFEERHTGYPV-ERNGEIVGLVTLEDARAVREV 310

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  +V D+M      +  D  +  A+  L  +N+  L+V+D+     G++   D++  
Sbjct: 311 ERDAYTVGDIMTTELIAVAPDEDVMTALSELEGNNVGRLIVLDEADAFRGLLTRSDIMTA 370



 Score = 35.6 bits (81), Expect = 9.9,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 24/62 (38%), Gaps = 5/62 (8%)

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLL-RQHNISVLMVVDDCQKAIGIVHF 332
                  ++V DVM        +  DT +   ++ +  + + +   V +   + +G+V  
Sbjct: 244 MRAAFEGVTVADVMTPADRVTTVDPDTKVRELIRTMFEERH-TGYPV-ERNGEIVGLVTL 301

Query: 333 LD 334
            D
Sbjct: 302 ED 303


>gi|226944803|ref|YP_002799876.1| DNA-binding transcriptional regulator HexR [Azotobacter vinelandii
           DJ]
 gi|226719730|gb|ACO78901.1| transcriptional regulatory protein, RpiR family [Azotobacter
           vinelandii DJ]
          Length = 289

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 7/167 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ Q         AV+ +   + ++   G+G S  +                   
Sbjct: 107 IASLDSACQTLDPQAIDRAVDLLIQAR-QIHFFGLGASASVAQDAQHKFFRFNLAVSAQC 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +++S++G + EL  + + AR     ++ +T+   S +A    
Sbjct: 166 DVLMQRMLASVAHTGDLFVIISYTGRTRELVEVAHLARENGASVLGLTA-AGSPLARACT 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           + L +P   ++  +   P TS I+QL + D LA  +   R     DF
Sbjct: 225 LSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRGI---DF 266


>gi|327311747|ref|YP_004338644.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326948226|gb|AEA13332.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 135

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 3/126 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +       +   +  V+    + +A  I++E+R G + VV    +L G+I+E DI R 
Sbjct: 2   CNIVVKAGAIAKRPVITVEPSATIEEAARIMAERRIGFLPVV-SSGRLVGVISERDIVRA 60

Query: 276 FHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                +    VE++M +    +  +  +     L+R+  I  ++V+   +   G++   D
Sbjct: 61  VASGASPKAPVEEIMRREVVTVNFNDDVEAVWSLMREMGIRHMVVMRGDE-IYGVISIRD 119

Query: 335 LLRFGI 340
            L   I
Sbjct: 120 FLAEKI 125


>gi|328544128|ref|YP_004304237.1| DNA polymerase III, epsilon subunit [polymorphum gilvum
           SL003B-26A1]
 gi|326413871|gb|ADZ70934.1| DNA polymerase III, epsilon subunit [Polymorphum gilvum
           SL003B-26A1]
          Length = 719

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/150 (24%), Positives = 55/150 (36%), Gaps = 8/150 (5%)

Query: 196 SRNFSENDFY--VLHPG--GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           +R     DF   VL  G    + +       V         +     L +A  +++ +  
Sbjct: 217 ARPSERPDFALAVLRTGSQRAIDSYLYRQRLVDVMSSPPIAIGADATLHEATRLMAARGI 276

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQL 308
           GCV +VD      GI+TE D+           S   V D+M         DT L  A+ L
Sbjct: 277 GCV-IVDGTGGAPGIVTERDVLAVMADKGPEASGVIVRDIMSAPVITAPADTYLYRALGL 335

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + N+  L V D   +  GI     LLR 
Sbjct: 336 MARRNLRYLGVTDAGGRLAGIFTLRTLLRE 365


>gi|309389812|gb|ADO77692.1| putative sigma54 specific transcriptional regulator [Halanaerobium
           praevalens DSM 2228]
          Length = 698

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 5/101 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKV 295
             +  A  I    +     V+    ++ GI T+  I +   + L NT  V  +M K+   
Sbjct: 18  TSIKKAAEIFYNNKIDGAPVISAAGEVIGIFTKSHIMKATIEGLKNTEKVSSIMTKDIIT 77

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           I     L    Q+     +  L VV+   K IGI+   DLL
Sbjct: 78  IRPQQKLEEVWQI----PVGRLPVVNQKNKLIGILTRTDLL 114



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 25/56 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+  M K+P  + + T +  A ++   + I    V+    + IGI     +++ 
Sbjct: 1   MKVKQAMTKDPITLGQKTSIKKAAEIFYNNKIDGAPVISAAGEVIGIFTKSHIMKA 56


>gi|297194732|ref|ZP_06912130.1| CBS domain-containing protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|297152419|gb|EDY66851.2| CBS domain-containing protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 157

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     +  A  ++ E   G + + D  ++L GI+T+ DI         D + 
Sbjct: 14  MHPGARWIPAHETVDRAAQLMRELDVGALPIADADERLCGILTDRDIVVGCVAMGHDPSK 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  ++    P+ I     ++  ++ ++ H I  L V+ + ++ +G++   DL +
Sbjct: 74  VTAGEMAKGTPRWIDAGADVSAVLREMQGHQIRRLPVI-ENKRLVGMISEADLAQ 127



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M    + I     +  A QL+R+ ++  L + D  ++  GI+   D++
Sbjct: 8   TTAKDIMHPGARWIPAHETVDRAAQLMRELDVGALPIADADERLCGILTDRDIV 61


>gi|218781404|ref|YP_002432722.1| hypothetical protein Dalk_3566 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218762788|gb|ACL05254.1| CBS domain containing membrane protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 205

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 64/187 (34%), Gaps = 27/187 (14%)

Query: 177 TSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGG---KLGTLFVCASDVMHSGDSIP 231
           +S+ ++L   D L+   ++    + + +DF  ++       +  L             + 
Sbjct: 11  SSSSVELTKDDILSAMKSISGYIDITPSDFQEIYKIAFRHAIERLSRLVKAEDIMTRDVV 70

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------------- 276
            V     L +   I+       V VVD    + GII+E D                    
Sbjct: 71  SVAQDTLLSETAAIMEAANVSGVPVVDGDNFIMGIISEKDFLEKMGGKKNGSFMGVIAEC 130

Query: 277 -------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +   S +DVM            ++   ++L +H I+ + VVD   + +GI
Sbjct: 131 LSNRGCVAMPIREKSAKDVMTFPVITAQRSNTISELSKMLAEHQINRIPVVDGKGRLVGI 190

Query: 330 VHFLDLL 336
           V   D++
Sbjct: 191 VSRGDIV 197


>gi|124268532|ref|YP_001022536.1| putative nucleotidyltransferase [Methylibium petroleiphilum PM1]
 gi|124261307|gb|ABM96301.1| putative nucleotidyltransferase [Methylibium petroleiphilum PM1]
          Length = 646

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
           +  +    +   PL  A+  + + R G + V D+     GI+T  DI       +   + 
Sbjct: 187 ATPAPRTCRPDTPLALALQAMQQHRIGSMLVTDDLGAPAGILTRYDILDRITLPQLPLST 246

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  VM +    +  D     A  L+ +H +  + +     + +G+V   DL
Sbjct: 247 PIAAVMTQPVHALTVDHTAQDAALLMSRHGLRHVPIT-SSGRLVGVVSERDL 297



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F        + ++    P+    DT L +A+Q ++QH I  ++V DD     GI+   D
Sbjct: 173 AFATQSLERRLGELATPAPRTCRPDTPLALALQAMQQHRIGSMLVTDDLGAPAGILTRYD 232

Query: 335 LL 336
           +L
Sbjct: 233 IL 234


>gi|327542953|gb|EGF29403.1| sugar-phosphate nucleotide transferase [Rhodopirellula baltica
           WH47]
          Length = 353

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 50/106 (47%), Gaps = 1/106 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIK 291
           V     +++A+ ++         VVD   ++ G+IT+GD+ R   +      SVE ++  
Sbjct: 19  VTASSSILEAMKVIDSGAAQIAIVVDNESRVTGVITDGDLRRGILRGAGLHDSVESLVRT 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + + E T  + A+ L++   +S L V+D   +  G+     +++
Sbjct: 79  KFRSVPEGTTRSEALDLIQAFGVSQLPVIDQSGRLCGLHSLNRIIQ 124


>gi|221632822|ref|YP_002522044.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
 gi|221156254|gb|ACM05381.1| IMP dehydrogenase [Thermomicrobium roseum DSM 5159]
          Length = 166

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/130 (16%), Positives = 47/130 (36%), Gaps = 26/130 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
           +     + +   ++ E     V V+DE +++ GI+TE D+                    
Sbjct: 18  ISPETSVGEIARLMWEHAISGVPVIDEQRRVIGIVTEFDLIAREASFNAPLYVPFLDAFF 77

Query: 278 -----------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                      + +      ++M      I  +  +     L+ +  ++ + VVD+  + 
Sbjct: 78  KVPGTGDETQLRKILATKAAEIMSSPAITIGPEETIEALATLMYRRRVNPVPVVDEEGRL 137

Query: 327 IGIVHFLDLL 336
           +GIV   DL+
Sbjct: 138 LGIVSRSDLI 147



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  + V  +M ++   I  +T +    +L+ +H IS + V+D+ ++ IGIV   DL+
Sbjct: 2   VQEIRVRSLMTRDVVAISPETSVGEIARLMWEHAISGVPVIDEQRRVIGIVTEFDLI 58


>gi|182625116|ref|ZP_02952893.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens D str. JGS1721]
 gi|177909736|gb|EDT72162.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens D str. JGS1721]
          Length = 378

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|260469841|ref|ZP_05813992.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
 gi|259028383|gb|EEW29708.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
          Length = 314

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 57/163 (34%), Gaps = 6/163 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
                +R L   E  L      +   A E I   +   V    G S  +  +    L   
Sbjct: 124 VFGEARRALQEAERQLDP---VELQKAAELIAKARQVTVFGLGGSSSALAQETQYRLFRY 180

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G                  +   DL+I +S +G + E+   +  A+ +    I +T+   
Sbjct: 181 GITVNAQCDPYLMRMTASTLKPGDLVIAISATGRTREVIEAVELAKHYRANAIGVTA-PD 239

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + +A   D+ L +       P  L PT S    LA+ D LA+A
Sbjct: 240 TELARACDVRLAVAVPE--YPDTLKPTASRYAFLAMIDLLAVA 280


>gi|257880646|ref|ZP_05660299.1| transcriptional regulator [Enterococcus faecium 1,230,933]
 gi|257814874|gb|EEV43632.1| transcriptional regulator [Enterococcus faecium 1,230,933]
          Length = 272

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 63/163 (38%), Gaps = 1/163 (0%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS  K    K     K                   +L S+++     + + A++ I   K
Sbjct: 63  FSDLKIEIAKEDFSQKKEHPTSVKYYDEIANNLTEALYSTIRLLDEEKLNEAIKMITQSK 122

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             + I G+G SG+    L +     G  +  V           ++T +DL+I+ S SG +
Sbjct: 123 N-IYIFGVGSSGNTSLDLENMFLRVGVQAKAVLDPHFQSQVASLLTVNDLVIIFSLSGKT 181

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            +    L  A++    +IAIT+   S +   AD+VL    E  
Sbjct: 182 KDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADLVLQTAIEEF 224


>gi|269127988|ref|YP_003301358.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
 gi|268312946|gb|ACY99320.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
          Length = 139

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
           +          +   V   C L++A   +     G V V  E  +L+G++T+ DI  R  
Sbjct: 1   MARRASEVMTPAPVTVPPHCSLMEAAAQMRRHGIGDVLVT-EDDQLRGLLTDRDIVVRAV 59

Query: 277 H--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +D+ T +V +V  +    +        A++++R+H +  + V+D   + +G++   D
Sbjct: 60  AAGRDMATTTVGEVCSRRVFTVSAADDADAAVRIMREHAVRRVPVIDH-GRPVGVISLGD 118

Query: 335 L 335
           +
Sbjct: 119 M 119



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +VM   P  +     L  A   +R+H I  ++V +D Q   G++   D++
Sbjct: 5   ASEVMTPAPVTVPPHCSLMEAAAQMRRHGIGDVLVTEDDQ-LRGLLTDRDIV 55


>gi|149020395|ref|ZP_01835287.1| hypothetical protein CGSSp23BS72_06469 [Streptococcus pneumoniae
           SP23-BS72]
 gi|303260018|ref|ZP_07345992.1| AcuB family protein [Streptococcus pneumoniae SP-BS293]
 gi|303261424|ref|ZP_07347372.1| AcuB family protein [Streptococcus pneumoniae SP14-BS292]
 gi|303264091|ref|ZP_07350012.1| AcuB family protein [Streptococcus pneumoniae BS397]
 gi|303266296|ref|ZP_07352187.1| AcuB family protein [Streptococcus pneumoniae BS457]
 gi|303269537|ref|ZP_07355301.1| AcuB family protein [Streptococcus pneumoniae BS458]
 gi|147930697|gb|EDK81679.1| hypothetical protein CGSSp23BS72_06469 [Streptococcus pneumoniae
           SP23-BS72]
 gi|302637558|gb|EFL68045.1| AcuB family protein [Streptococcus pneumoniae SP14-BS292]
 gi|302638937|gb|EFL69398.1| AcuB family protein [Streptococcus pneumoniae SP-BS293]
 gi|302640922|gb|EFL71305.1| AcuB family protein [Streptococcus pneumoniae BS458]
 gi|302644226|gb|EFL74482.1| AcuB family protein [Streptococcus pneumoniae BS457]
 gi|302646496|gb|EFL76722.1| AcuB family protein [Streptococcus pneumoniae BS397]
          Length = 218

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N + V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKIKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|332523616|ref|ZP_08399868.1| CBS domain protein [Streptococcus porcinus str. Jelinkova 176]
 gi|332314880|gb|EGJ27865.1| CBS domain protein [Streptococcus porcinus str. Jelinkova 176]
          Length = 220

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +    +  +     +  A  I+ ++    + V+ E  +L G++T G +            
Sbjct: 6   YMTKDVVTITPNTGVAQAADIMRDQGIRRLPVM-EDDRLVGLVTAGTMAEATPSKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN   ++D+M+K    I  +  L  A+ L+ +H I VL V+D+ Q   GI+  
Sbjct: 65  IYEMNYLLNKTKIKDIMLKKVITITPEASLEDAIYLMLEHKIGVLPVLDNHQ-LCGIITD 123

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 124 RDVFKA 129



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K+   I  +T +  A  ++R   I  L V++D  + +G+V 
Sbjct: 1   MAVKDYMTKDVVTITPNTGVAQAADIMRDQGIRRLPVMEDD-RLVGLVT 48



 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     L DAI ++ E + G + V+D   +L GIIT+ D+F+ F
Sbjct: 88  ITPEASLEDAIYLMLEHKIGVLPVLD-NHQLCGIITDRDVFKAF 130


>gi|269926917|ref|YP_003323540.1| CBS domain containing membrane protein [Thermobaculum terrenum ATCC
           BAA-798]
 gi|269790577|gb|ACZ42718.1| CBS domain containing membrane protein [Thermobaculum terrenum ATCC
           BAA-798]
          Length = 132

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 50/113 (44%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + D   IL+EK      VVD+  ++ GI++E D+        N  +V
Sbjct: 7   MTTPVVTVTADMSIRDLAKILTEKGISGAPVVDDSGRVVGIVSEADVI-----AKNGFTV 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM        EDT + V   L+  + I+ + V+    + +GIV   D++R 
Sbjct: 62  ADVMQSQVISASEDTPVEVICSLMTNNKINRVPVL-SGDRLVGIVTRADIVRA 113



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+M      +  D  +    ++L +  IS   VVDD  + +GIV   D++
Sbjct: 3   ARDIMTTPVVTVTADMSIRDLAKILTEKGISGAPVVDDSGRVVGIVSEADVI 54


>gi|217076752|ref|YP_002334468.1| inosine-5-monophosphate dehydrogenase-related protein [Thermosipho
           africanus TCF52B]
 gi|217036605|gb|ACJ75127.1| inosine-5-monophosphate dehydrogenase-related protein [Thermosipho
           africanus TCF52B]
          Length = 306

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/105 (29%), Positives = 49/105 (46%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     +     IL  KR   V VV+  +++ GII+  DI +    +     VE+ M KN
Sbjct: 27  VLPNRTIAQVKEILRLKRISGVPVVNYKKRVVGIISIEDIIKCLEANSLNALVEEKMTKN 86

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V+  +  L   M+L  ++      VVDD  + +GIV   D+L+
Sbjct: 87  VVVVNVNDTLRDVMELFEKYGYGRFPVVDDEHRLVGIVTKNDILK 131



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 33/67 (49%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+F       + + V + M  +   +L +  +    ++LR   IS + VV+  ++ +GI+
Sbjct: 2   DLFDKVKHIFSDMKVSEFMNSDVIYVLPNRTIAQVKEILRLKRISGVPVVNYKKRVVGII 61

Query: 331 HFLDLLR 337
              D+++
Sbjct: 62  SIEDIIK 68



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             L D + +  +  +G   VVD+  +L GI+T+ DI ++    L
Sbjct: 94  DTLRDVMELFEKYGYGRFPVVDDEHRLVGIVTKNDILKSVAMKL 137


>gi|325568456|ref|ZP_08144823.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
 gi|325158225|gb|EGC70378.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
          Length = 286

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 1/144 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  Q   A  ++ A + R+ + GIG S  I   +       G    F +        L  
Sbjct: 117 LEEQLMLAAAELIATRERIFVCGIGASSLIAQDIQQKWTRLGKIVVFENDYNLLFPQLVK 176

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
             +  L+ V+S SG + E+  +    +   +P++++T    + +   AD+ L +    + 
Sbjct: 177 NEKKSLLWVISNSGHTPEMVHLAEIVKNLGVPILSLTRFGSNPLTKLADVPLQVS-RSKE 235

Query: 169 CPHGLAPTTSAIMQLAIGDALAIA 192
                A T S I  L   D L   
Sbjct: 236 ANQRSAATNSIIAHLLAVDVLFYV 259


>gi|320353568|ref|YP_004194907.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320122070|gb|ADW17616.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 201

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 62/186 (33%), Gaps = 27/186 (14%)

Query: 179 AIMQLAIGDALAIA--LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP---LV 233
             ++LA  D LA    +    + S  DF  +        L      +      +     V
Sbjct: 10  TTIELADADVLAAMKEIQGYIDISTGDFREVFQVAYNHALRRLRESLRAQDIMVCPAQCV 69

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN----------------- 275
                LI A T L++K F    VV+   K+ G+++E D + R                  
Sbjct: 70  SEDMDLIQAATFLADKGFSGAPVVNAEGKVAGVLSEKDFLARMGMGTPLTFMQIVAHCLT 129

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   L    V ++M         +  +     L     I+ L +VD   + IGIV 
Sbjct: 130 HKGCMAMSLRNHCVREIMTAPAITAGLEITMGAIAALFVDRRINRLPIVDAEGRPIGIVT 189

Query: 332 FLDLLR 337
             DL++
Sbjct: 190 RTDLVQ 195


>gi|291085235|ref|ZP_06352489.2| transcriptional regulator HexR [Citrobacter youngae ATCC 29220]
 gi|291072431|gb|EFE10540.1| transcriptional regulator HexR [Citrobacter youngae ATCC 29220]
          Length = 297

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 76  LHLAQSLANGTPYVNRNVDEDDSVESYTGKIFESAMASLDHVRQSLDNT---AVNRAVDL 132

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+I+++S
Sbjct: 133 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDDDVIVLIS 191

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 192 HTGRTKSLVELAQLARENDAMVIALTS-PGTPLAREATLAITLDVPEDTDIY--MPMVSR 248

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 249 LAQLTVIDVLATGFTLRRGAKFRD 272


>gi|329851205|ref|ZP_08265962.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
 gi|328840051|gb|EGF89623.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
          Length = 143

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     L     +L  ++ G   V D   ++ GII+E DI R   +   +  T  V   M
Sbjct: 17  VTPDDTLSAVAALLYTRKVGAFVVTDRVDRVIGIISERDIIRAIAQSGPESLTQPVNKFM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            K+         +   +  +    I  L V+ +  + +GI+   DL++  I
Sbjct: 77  TKDVVSAHLGETVETLLSRMTDRRIRHLPVM-EGVRLVGIISIGDLVKARI 126



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  D  L+    LL    +   +V D   + IGI+   D++R 
Sbjct: 16  TVTPDDTLSAVAALLYTRKVGAFVVTDRVDRVIGIISERDIIRA 59


>gi|46199936|ref|YP_005603.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
 gi|55980318|ref|YP_143615.1| CBS domain-containing protein [Thermus thermophilus HB8]
 gi|46197563|gb|AAS81976.1| inosine-5'-monophosphate dehydrogenase [Thermus thermophilus HB27]
 gi|55771731|dbj|BAD70172.1| CBS domain protein [Thermus thermophilus HB8]
          Length = 143

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 4/102 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
              ++H G  +  +     ++DA+  L+E   G + V+ EG++L GI TE D  R     
Sbjct: 4   RQVLVHKGGGVHAIHPEATVLDALRKLAEHDIGALLVM-EGERLLGIFTERDYARKLVLL 62

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +      V +VM  +   +  +  L  AM+L+ +     L 
Sbjct: 63  GRFSKDTKVREVMTTDVPTVAPEASLEEAMRLMTERRTRHLP 104


>gi|116493109|ref|YP_804844.1| transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
 gi|116103259|gb|ABJ68402.1| Transcriptional regulator [Pediococcus pentosaceus ATCC 25745]
          Length = 277

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 8/181 (4%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    A +        L++ E++L G+        V  I   K ++ + G+G S  +  
Sbjct: 88  DSPKTMAKKIFKLNVDTLNATENALNGK---DLDQCVNLILNTK-KLGLFGLGASNIVAL 143

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                   T     +         +   ++++D+++++S SG + +  A+   A+  +IP
Sbjct: 144 NGFHKFLRTTIEPIYASDFHMQLMEAARLSKNDVMLLVSHSGENRDALALAEVAKERNIP 203

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA--IALLESRN 198
           LI ITS   S ++  AD+ L +    ES  +      + I Q++I D L   IA+   RN
Sbjct: 204 LILITSSANSTLSKKADVTL-VSVAEESL-YRPDALHALIAQISIMDTLFMMIAIKTKRN 261

Query: 199 F 199
            
Sbjct: 262 I 262


>gi|329848890|ref|ZP_08263918.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
 gi|328843953|gb|EGF93522.1| CBS domain pair family protein [Asticcacaulis biprosthecum C19]
          Length = 138

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 51/115 (44%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                 LV     L +A  ++ +  FG + V  E  +LKG +T+ DI  R   +      
Sbjct: 7   MTTKFQLVAPDTSLGEAAKLMRDGDFGYLPV-GEDDRLKGAVTDRDIVIRGLAEGRGPNA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V +V+ +      ED  +  A  +++   I  L V++  ++ +GI+   D+ R 
Sbjct: 66  TVAEVLSEQIVYCFEDDEINEAADIMKLEQIRRLAVLNSDKRLVGIISLGDIARI 120



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V D+M    +++  DT L  A +L+R  +   L V +D  +  G V   D++  G+
Sbjct: 3   VRDIMTTKFQLVAPDTSLGEAAKLMRDGDFGYLPVGEDD-RLKGAVTDRDIVIRGL 57


>gi|289582974|ref|YP_003481440.1| signal transduction protein with CBS domains [Natrialba magadii
           ATCC 43099]
 gi|289532527|gb|ADD06878.1| putative signal transduction protein with CBS domains [Natrialba
           magadii ATCC 43099]
          Length = 212

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V     +  A++++  ++ GCV VV  G    GI+TE D+        D    +V ++M 
Sbjct: 18  VSESDTVQGAVSLMRAEQTGCVLVV-RGPDPVGIMTEWDVLGLVEDGGDPAETTVGEIMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +     +  A  ++ + +I  L VVD   + +G+V   D++  
Sbjct: 77  SPVITVDPTQSVPDAATIMARESIRNL-VVDSNDEVLGLVTQRDIIAA 123


>gi|320161176|ref|YP_004174400.1| hypothetical protein ANT_17740 [Anaerolinea thermophila UNI-1]
 gi|319995029|dbj|BAJ63800.1| hypothetical protein ANT_17740 [Anaerolinea thermophila UNI-1]
          Length = 332

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 38/103 (36%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +  A+ +   +R     V  +   L G+++  D+ R          +   M  NP
Sbjct: 43  HPDMLMHQALELFRNERISGAPVTCDS-TLCGVLSMEDLIRCLLNQDLDARISAYMTPNP 101

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I     +  A++L        L V+D  +K +GI+   D+ 
Sbjct: 102 FYIHPADPVIEALKLFVSTRHGRLPVIDQDRKVVGILTKGDIT 144



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)

Query: 267 ITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ DI +     +    L VE+VM ++ K +  D L+  A++L R   IS   V  D  
Sbjct: 11  LTDQDIQQITRTEELAYELKVEEVMSRDVKCLHPDMLMHQALELFRNERISGAPVTCDS- 69

Query: 325 KAIGIVHFLDLLR 337
              G++   DL+R
Sbjct: 70  TLCGVLSMEDLIR 82



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD----IFRNFHKDLNTLSVE 286
           +    P+I+A+ +    R G + V+D+ +K+ GI+T+GD    + +   KD     + 
Sbjct: 104 IHPADPVIEALKLFVSTRHGRLPVIDQDRKVVGILTKGDITVGLLKALQKDFQAEEIR 161


>gi|314967450|gb|EFT11549.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL037PA1]
          Length = 293

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|313827607|gb|EFS65321.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL063PA2]
 gi|315108568|gb|EFT80544.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL030PA2]
          Length = 293

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|225860728|ref|YP_002742237.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298255816|ref|ZP_06979402.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19A]
 gi|298502539|ref|YP_003724479.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
 gi|225728031|gb|ACO23882.1| AcuB family protein [Streptococcus pneumoniae Taiwan19F-14]
 gi|298238134|gb|ADI69265.1| AcuB family protein [Streptococcus pneumoniae TCH8431/19A]
 gi|327390111|gb|EGE88454.1| CBS domain pair family protein [Streptococcus pneumoniae GA04375]
          Length = 218

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNYQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NYQVYGVITDRDVFQAF 130


>gi|218295521|ref|ZP_03496334.1| magnesium transporter [Thermus aquaticus Y51MC23]
 gi|218244153|gb|EED10679.1| magnesium transporter [Thermus aquaticus Y51MC23]
          Length = 448

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 4/81 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVDE  +L G+++  D+     +      V ++M      +  DT      +L+  ++ +
Sbjct: 172 VVDEEGRLMGVLSLRDLIVADPR----TKVAEIMNPKVVYVRTDTDQEEVARLMADYDFT 227

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
           VL VVD+  + +GIV   D+L
Sbjct: 228 VLPVVDEEGRLVGIVTVDDVL 248



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 30/75 (40%), Gaps = 4/75 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V+      +   ++++  F  + VVDE  +L GI+T  D+     
Sbjct: 193 PRTKVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLE 252

Query: 278 ----KDLNTLSVEDV 288
               +D++ L+  DV
Sbjct: 253 EEATEDIHKLAAVDV 267


>gi|313764341|gb|EFS35705.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL013PA1]
 gi|313815879|gb|EFS53593.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL059PA1]
 gi|314918115|gb|EFS81946.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL050PA1]
 gi|314920194|gb|EFS84025.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL050PA3]
 gi|314931717|gb|EFS95548.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL067PA1]
 gi|314955619|gb|EFT00021.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL027PA1]
 gi|314958016|gb|EFT02119.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL002PA1]
 gi|315098647|gb|EFT70623.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL059PA2]
 gi|327450669|gb|EGE97323.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL087PA3]
 gi|327453992|gb|EGF00647.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL083PA2]
 gi|328754088|gb|EGF67704.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL087PA1]
          Length = 293

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|302556797|ref|ZP_07309139.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302474415|gb|EFL37508.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
          Length = 225

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 18/123 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---------------RNFH 277
           V    P  + +  + ++R   + V++   ++ G+++E D+                R   
Sbjct: 19  VGRDAPFKEIVRTMEQRRVSAMPVLEGEGRVVGVVSEADLLPKEEFRDSGPTPVEERRRP 78

Query: 278 KDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            D+     ++  D+M +    +  D  L  A +++   ++  L VVD+     GIV   D
Sbjct: 79  SDVVRAGAVTAGDLMSRPAVTVHSDATLAQAARIMGVRHVKRLPVVDESAMLQGIVSRAD 138

Query: 335 LLR 337
           LL+
Sbjct: 139 LLK 141



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM +    +  D      ++ + Q  +S + V++   + +G+V   DLL
Sbjct: 8   VSDVMTRTVVAVGRDAPFKEIVRTMEQRRVSAMPVLEGEGRVVGVVSEADLL 59



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
              P   +    V A D+M        V     L  A  I+  +    + VVDE   L+G
Sbjct: 75  RRRPSDVVRAGAVTAGDLM--SRPAVTVHSDATLAQAARIMGVRHVKRLPVVDESAMLQG 132

Query: 266 IITEGDIFRNFHK 278
           I++  D+ + F +
Sbjct: 133 IVSRADLLKVFLR 145


>gi|227111596|ref|ZP_03825252.1| DNA-binding transcriptional regulator HexR [Pectobacterium
           carotovorum subsp. brasiliensis PBR1692]
 gi|227328637|ref|ZP_03832661.1| DNA-binding transcriptional regulator HexR [Pectobacterium
           carotovorum subsp. carotovorum WPP14]
 gi|253688218|ref|YP_003017408.1| transcriptional regulator, RpiR family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
 gi|251754796|gb|ACT12872.1| transcriptional regulator, RpiR family [Pectobacterium carotovorum
           subsp. carotovorum PC1]
          Length = 289

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL  ++SSL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 97  KIFESAMAGLEQVKSSLDVT---AVNRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              +  D+++++S +G +  L  +   AR     +IAITS+ 
Sbjct: 153 FNIPVVYFDDIVMQRMSCMNSSDGDVVVLISHTGRTKSLVEMAQLARENDATVIAITSDG 212

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
              +A  A + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 213 T-PLAREASLALRLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGEKFRD 264


>gi|225181929|ref|ZP_03735363.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Dethiobacter alkaliphilus AHT 1]
 gi|225167369|gb|EEG76186.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Dethiobacter alkaliphilus AHT 1]
          Length = 369

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 3/117 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 S           V     + +A+ I+ ++R   + VVD    L GI+T  D+  
Sbjct: 244 RTPDTVSLEEIMISDPVTVNPKRGVTEALRIMRKRRVDSLMVVDNKDLLIGILTAKDVHE 303

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           N +       + ++M K+     E+  ++  + L+R+ N+  + V     K  G++ 
Sbjct: 304 NINHGG---QIAEIMSKDVVAASENQSVSDILSLMREKNVGYMPVTTVDGKLKGLIT 357



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 36/64 (56%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +  +T+S+E++MI +P  +     +T A++++R+  +  LMVVD+    IGI+  
Sbjct: 239 RERMLRTPDTVSLEEIMISDPVTVNPKRGVTEALRIMRKRRVDSLMVVDNKDLLIGILTA 298

Query: 333 LDLL 336
            D+ 
Sbjct: 299 KDVH 302


>gi|196248266|ref|ZP_03146967.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. G11MC16]
 gi|196211991|gb|EDY06749.1| 6-phospho 3-hexuloisomerase [Geobacillus sp. G11MC16]
          Length = 182

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           +  I +E   + +       E        V    A   R+ + G G+SG +G   A  L 
Sbjct: 4   IEVIFSEIEQVFA-------EFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLM 56

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + V            +   D +I +S SG + +   I   A++    +IA+T++
Sbjct: 57  HLGATVYAVGETVTP-----SLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTD 111

Query: 148 NKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQLAIGDALAIALLESRNFSEND 203
             S +A  A + + +P   +           P  S   Q       AI L  + N     
Sbjct: 112 LSSALANIASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEH 171

Query: 204 FYVLH 208
                
Sbjct: 172 QKAFQ 176


>gi|150017719|ref|YP_001309973.1| glycine/betaine ABC transporter ATPase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149904184|gb|ABR35017.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Clostridium beijerinckii NCIMB 8052]
          Length = 375

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D   +      L+  I  +   +   + V+D    L GIIT   I     +++    V
Sbjct: 254 MIDHPVVCFKNASLLRCIEKMRSSKVDSLMVIDRESYLLGIITAKQIQNKTDRNI---PV 310

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E++M      +  D  +   ++L+++H I  + V+DD     GI+ 
Sbjct: 311 EEIMNSRFISVQPDDSIIDILELVKEHKIGQVPVLDDFGVLKGIIT 356



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +D+MI +P V  ++  L   ++ +R   +  LMV+D     +GI+ 
Sbjct: 250 AKDIMIDHPVVCFKNASLLRCIEKMRSSKVDSLMVIDRESYLLGIIT 296


>gi|172056507|ref|YP_001812967.1| RpiR family transcriptional regulator [Exiguobacterium sibiricum
           255-15]
 gi|171989028|gb|ACB59950.1| transcriptional regulator, RpiR family [Exiguobacterium sibiricum
           255-15]
          Length = 284

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 67/159 (42%), Gaps = 2/159 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              + +L+ + +     +   A + +   +  +   GIG S  +    A      G  + 
Sbjct: 102 SNSIQALQDTAKQLSEDRIAEAADVLDQARA-IYFYGIGASNVVALDAAQKWTRVGKLTI 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                      L   ++DD+   +S+SG ++E+  ++  A+   + +I++T    + V+ 
Sbjct: 161 QESDQHLVATILANASQDDVFFAISYSGETEEVVELIRLAKIRGLKVISLTRFGDNRVSQ 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            ADI L   + PE+ P   A  +S + QL   D L ++ 
Sbjct: 221 LADIALWTSRAPEA-PLRSAALSSRLAQLFAIDVLFLSY 258


>gi|330505348|ref|YP_004382217.1| signal-transduction protein [Pseudomonas mendocina NK-01]
 gi|328919634|gb|AEB60465.1| signal-transduction protein [Pseudomonas mendocina NK-01]
          Length = 145

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 55/127 (43%), Gaps = 7/127 (5%)

Query: 217 FVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               ++V+ S     +  V     L D + IL+EK  G + VV  G +L GI++E D  R
Sbjct: 1   MKTVAEVIRSKAHTSVYSVDSEDSLRDGLRILAEKGIGAL-VVLSGGRLVGIVSERDYVR 59

Query: 275 NF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   +    + ++M +    +     L   M+L+ +  +  L V+    + IG++ 
Sbjct: 60  KVALADPSMLDAKISEIMTREVISVGPRDNLQYCMELMTERRLRHLPVL-AEGELIGLLS 118

Query: 332 FLDLLRF 338
             DL++ 
Sbjct: 119 IGDLVKE 125


>gi|328753250|gb|EGF66866.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL025PA2]
          Length = 293

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/187 (20%), Positives = 72/187 (38%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G                 +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDTHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|322411207|gb|EFY02115.1| hypothetical protein SDD27957_02155 [Streptococcus dysgalactiae
           subsp. dysgalactiae ATCC 27957]
          Length = 220

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ +K    + V+ E  +L G++TEG +                +  L
Sbjct: 14  ISPEESVAHAADLMRDKGLRRLPVI-EKGQLVGLVTEGTMADASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MI+    +  D  L  A+  +  + + VL VV    + +GI+   D+ + 
Sbjct: 73  NKTKIRDIMIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKA 129



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M K    I  +  +  A  L+R   +  L V++   + +G+V 
Sbjct: 1   MSVKDYMTKEVISISPEESVAHAADLMRDKGLRRLPVIEK-GQLVGLVT 48



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+    L DAI  +   + G + VV +  ++ GIIT+ D+F+ F
Sbjct: 81  MIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKAF 130


>gi|319401018|gb|EFV89237.1| CBS domain pair family protein [Staphylococcus epidermidis FRI909]
          Length = 432

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
             K+    +   D++   + + ++     + D   I +E       +V+E  KL GI+T 
Sbjct: 180 NQKIRKEILVVEDIVKPINELSVLFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I     KDL       VM KNP  +     +     LL    I +L V D+ +KA+G+
Sbjct: 240 REIINMNEKDLL----GKVMTKNPLSVKLTNTVASCAHLLIWEGIELLPVTDNNKKAVGV 295

Query: 330 VHFLDLLR 337
           ++  D+L+
Sbjct: 296 INRQDVLK 303


>gi|298247177|ref|ZP_06970982.1| transcriptional regulator, RpiR family [Ktedonobacter racemifer DSM
           44963]
 gi|297549836|gb|EFH83702.1| transcriptional regulator, RpiR family [Ktedonobacter racemifer DSM
           44963]
          Length = 290

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 6/172 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + + ++ + ++   + L  +L      AVE +     R+   GIG S  +        
Sbjct: 106 ARKVLQSDIQAIADTLAVLDEQL---LERAVEALVNA-TRIEFYGIGPSLPVALDAYYRF 161

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G P    H A         +    +   +S SG + E    L  AR      I ++S
Sbjct: 162 LRIGLPVTVTHDAVMQAVSAANLPPGSVAFAISHSGRTRETLNALRSARAAGAFCILLSS 221

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + ++ +ADI L       +     A  TS I  L++ DAL +A+   R+
Sbjct: 222 HVHTPLSEYADIALITASRETAFR--TAALTSRIAHLSVIDALYVAVASRRS 271


>gi|260777449|ref|ZP_05886343.1| Signal transduction protein [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607115|gb|EEX33389.1| Signal transduction protein [Vibrio coralliilyticus ATCC BAA-450]
          Length = 629

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 51/112 (45%), Gaps = 12/112 (10%)

Query: 238 PLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDLN-TLSVE 286
            + +A   ++E+    + ++D         +   L GIIT+ D+  R   + L+    V 
Sbjct: 168 TIQNAAIKMAEENVSSLLIIDPDILEDNEEDNSPLVGIITDRDLCTRVLAEGLDANDEVS 227

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM      +  +  +  AM  + ++N+  L V+   +K IGI+   D++R+
Sbjct: 228 SVMTTEVISLDHNAYVYEAMLTMLRYNVHHLPVL-KDKKPIGIIEATDIVRY 278


>gi|260550203|ref|ZP_05824416.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter sp. RUH2624]
 gi|260406731|gb|EEX00211.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter sp. RUH2624]
          Length = 488

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 60/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I+I S      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELISITSANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGENNELKGLITVTDFRKA 203


>gi|251781862|ref|YP_002996164.1| hypothetical protein SDEG_0448 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
 gi|242390491|dbj|BAH80950.1| hypothetical protein SDEG_0448 [Streptococcus dysgalactiae subsp.
           equisimilis GGS_124]
          Length = 220

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ +K    + V+ E  +L G++TEG +                +  L
Sbjct: 14  ISPEESVAHAADLMRDKGLRRLPVI-EKGQLVGLVTEGTMADASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MI+    +  D  L  A+  +  + + VL VV    + +GI+   D+ + 
Sbjct: 73  NKTKIRDIMIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKA 129



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M K    I  +  +  A  L+R   +  L V++   + +G+V 
Sbjct: 1   MSVKDYMTKEVISISPEESVAHAADLMRDKGLRRLPVIEK-GQLVGLVT 48



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+    L DAI  +   + G + VV +  ++ GIIT+ D+F+ F
Sbjct: 81  MIRQVVTVEPDASLEDAIYEMMTYKVGVLPVV-QNNQVVGIITDRDVFKAF 130


>gi|153826599|ref|ZP_01979266.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149739611|gb|EDM53831.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 637

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/189 (15%), Positives = 66/189 (34%), Gaps = 24/189 (12%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG---- 227
                    ++  +   L  AL    +   + F       +   L    +          
Sbjct: 98  NQVSFAVTAIEDTLLYCLPEALFHRLHQEFDSFADFVEVEQAVRLRQTVAKQKEQNDLIT 157

Query: 228 --------DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEG 270
                    S P +     +  A   ++++    + ++D    L          GI+TE 
Sbjct: 158 SKVKQLLTRSAPTIDKQASIQQAAQRMADENVSALLILDNQILLDTEDDSTPMVGIVTER 217

Query: 271 DI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+  R   + ++ T +V  VM      +  +  +  AM  + ++N+  L ++ + ++ IG
Sbjct: 218 DLCRRVLAQGMDVTQTVSQVMTHEVISLDHNAYVYEAMLAMLRNNVHHLPILRE-RQPIG 276

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 277 IIDMTDIVR 285


>gi|114777941|ref|ZP_01452855.1| inosine-5-monophosphate dehydrogenase related protein
           [Mariprofundus ferrooxydans PV-1]
 gi|114551728|gb|EAU54280.1| inosine-5-monophosphate dehydrogenase related protein
           [Mariprofundus ferrooxydans PV-1]
          Length = 143

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 26/130 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF----------------- 273
            K    L DA   +  +R G + VVD+    KL G+IT  D                   
Sbjct: 8   CKADDTLHDAAQKMVMRRCGSLPVVDDNDSTKLVGVITIRDTMLPLYPNFGEYIHDAKTA 67

Query: 274 RNFH------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           R+F       K +  + V DVM  NP  +  +  +  A   +   N+  + VVDD  K I
Sbjct: 68  RDFEDMEENYKRVMRMKVRDVMTPNPMSVDSEMPVLKAASFMGLKNLRRMPVVDD-GKLI 126

Query: 328 GIVHFLDLLR 337
           G+V   D+ R
Sbjct: 127 GMVSIGDINR 136



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 2/48 (4%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLD 334
           M         D  L  A Q +       L VVDD    K +G++   D
Sbjct: 1   MSHGSLSCKADDTLHDAAQKMVMRRCGSLPVVDDNDSTKLVGVITIRD 48


>gi|314935376|ref|ZP_07842729.1| putative transcriptional regulator [Staphylococcus hominis subsp.
           hominis C80]
 gi|313656711|gb|EFS20450.1| putative transcriptional regulator [Staphylococcus hominis subsp.
           hominis C80]
          Length = 268

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 68/200 (34%), Gaps = 27/200 (13%)

Query: 1   MHFYFSHFKSVTRKGHSLM-------KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQF 53
           M F   H KS     ++ +         + +Q     I  EK  +  L  +L+      F
Sbjct: 66  MKFSLQHEKSEKSVENAPLVQLIHRYHQNIIQQTGEFISEEK--IKRLAHNLKTCRQVNF 123

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
                            G+G SG   S+        G        A        +++ +D
Sbjct: 124 ----------------AGLGSSGLTASEFYYRAMRMGIKGLVSTDAHQMKISASLLSSND 167

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           + + +S SG + EL      AR     ++ IT+   S +  +AD+VL      +S  +  
Sbjct: 168 MFVAISNSGETSELIDAAKIARNQGAYVVVITNFEGSTITKNADLVLITS--AQSNNNDT 225

Query: 174 APTTSAIMQLAIGDALAIAL 193
               S I    + D ++  L
Sbjct: 226 RFINSQIATHFLLDLVSYIL 245


>gi|298230935|ref|ZP_06964616.1| AcuB family protein [Streptococcus pneumoniae str. Canada MDR_19F]
          Length = 196

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNYQ-VYGVITDRDVFQA 129



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NYQVYGVITDRDVFQAF 130


>gi|291567579|dbj|BAI89851.1| two-component hybrid sensor and regulator [Arthrospira platensis
           NIES-39]
          Length = 1778

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 25/131 (19%)

Query: 232 LVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGD 271
           LV +   + +AI ++SE R  C                      +V EG++L GI+T+GD
Sbjct: 22  LVTVETTVREAIALMSESRTSCSISSKASVLLEEVYGEARSSCVLVVEGEQLVGILTQGD 81

Query: 272 IFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAI 327
           I R     + L  L V +VM  +     E  L      + LLR++ I  L +VDD  + +
Sbjct: 82  IIRLCTEKRPLEQLLVGEVMTASVLSWRESELSNFFEVIDLLRKNQICHLPLVDDSDRLV 141

Query: 328 GIVHFLDLLRF 338
           G++   + LR+
Sbjct: 142 GLIT-HETLRY 151



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 10/110 (9%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMIKNPKVI 296
             + I +L + +   + +VD+  +L G+IT   +    H  DL  L +VE+VM       
Sbjct: 116 FFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTVEEVMTTEVICA 175

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVD--------DCQKAIGIVHFLDLLRF 338
             ++ L     L+ Q+ ++ +++V+        D    +GI+   D+++F
Sbjct: 176 SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTDVNVPVGILTEGDIVKF 225



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 52/132 (39%), Gaps = 12/132 (9%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGII 267
                 +VM +            L++   ++++ R  CV +V+              GI+
Sbjct: 160 RLRTVEEVMTTEVICA--SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTDVNVPVGIL 217

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           TEGDI +   F  DL   S + +M      + ++  L    +L+    I  ++V     +
Sbjct: 218 TEGDIVKFNTFCLDLENYSSQQLMSTPVFSVAKNENLWRIHELMSSQYIRRVLVTGSHGE 277

Query: 326 AIGIVHFLDLLR 337
            +GIV    +L+
Sbjct: 278 LLGIVTQTSMLK 289


>gi|169342960|ref|ZP_02863988.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens C str. JGS1495]
 gi|169298869|gb|EDS80943.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens C str. JGS1495]
          Length = 378

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|169779001|ref|XP_001823965.1| Inosine-5'-monophosphate dehydrogenase [Aspergillus oryzae RIB40]
 gi|238499591|ref|XP_002381030.1| IMP dehydrogenase, putative [Aspergillus flavus NRRL3357]
 gi|83772704|dbj|BAE62832.1| unnamed protein product [Aspergillus oryzae]
 gi|220692783|gb|EED49129.1| IMP dehydrogenase, putative [Aspergillus flavus NRRL3357]
          Length = 546

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/193 (21%), Positives = 68/193 (35%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D+ L  P          AP  S+ M       +AI +       +   N S  D     
Sbjct: 68  SDVTLDTPVTKRVSL--KAPLLSSPMDTVTEHNMAIHMALLGGLGIIHHNCSPEDQA--- 122

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQ---KLK 264
                  +        +     P+V      + +A  + S+  FG   V + G    KL 
Sbjct: 123 ------EMVRKVKRYENGFILDPVVLSPKATVGEAKELKSKWGFGGFPVTESGNLRSKLV 176

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GI+T  DI   FH +L    V  +M  +       T L  A ++LR      L +VD+  
Sbjct: 177 GIVTSRDI--QFHPNLED-PVTAIMSTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDNDG 233

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL +
Sbjct: 234 NLVSLLSRSDLTK 246


>gi|115522828|ref|YP_779739.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
 gi|115516775|gb|ABJ04759.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisA53]
          Length = 329

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 42/132 (31%), Gaps = 27/132 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           V    P       L +     V V+D+     GII+EGD+      D             
Sbjct: 14  VGPETPARKVAETLLKNGISAVPVLDDDGAPIGIISEGDLMPRDETDRDARRDWWLRMLS 73

Query: 281 --------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                         +  S  +VMI     I  D  L    +LL    I  +  +    K 
Sbjct: 74  QGQDVSPDYLKSLTDDRSAREVMISPVVTISADADLIEVAELLSSKRIKRVPAM-RDGKL 132

Query: 327 IGIVHFLDLLRF 338
           +GIV   DL+R 
Sbjct: 133 VGIVSRADLVRA 144



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V DVM      +  +T      + L ++ IS + V+DD    IGI+   DL+
Sbjct: 1   MKVSDVMSTRVVSVGPETPARKVAETLLKNGISAVPVLDDDGAPIGIISEGDLM 54



 Score = 36.4 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 1/61 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     LI+   +LS KR   V  +    KL GI++  D+ R F +     + 
Sbjct: 96  MISPVVTISADADLIEVAELLSSKRIKRVPAM-RDGKLVGIVSRADLVRAFAQSSRPAAA 154

Query: 286 E 286
           E
Sbjct: 155 E 155


>gi|291568084|dbj|BAI90356.1| PleD-like protein [Arthrospira platensis NIES-39]
          Length = 1384

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/144 (22%), Positives = 58/144 (40%), Gaps = 35/144 (24%)

Query: 232 LVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGD 271
           +V     +++AI  +S  R  C                      +V +   + GI+T+ D
Sbjct: 19  IVSGDLTVMEAIAFMSGVRLQCQMTDNISISESEPDLEARSTCVIVLQDLMVVGILTQRD 78

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAI 327
           I       ++L  L +E+VM  +   + E  L      + LL++H I  L +VDD  + +
Sbjct: 79  IVGLAAQQQNLGQLLIEEVMTPSVITLRESELTDSLTIINLLQKHRIRHLPIVDDSDRLV 138

Query: 328 GIVHFL----------DLLRFGII 341
           G+V             DLLR  ++
Sbjct: 139 GLVT-HQSLRKLMRPIDLLRLRLV 161



 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/176 (17%), Positives = 71/176 (40%), Gaps = 23/176 (13%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
              +   + + D + + +L  R+            G           ++    +  ++ +
Sbjct: 56  EARSTCVIVLQDLMVVGILTQRDI----------VGLAAQQQNLGQLLIEEVMTPSVITL 105

Query: 236 GCP-LIDAITILS---EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLS-VEDVM 289
               L D++TI++   + R   + +VD+  +L G++T   + +     DL  L  V +VM
Sbjct: 106 RESELTDSLTIINLLQKHRIRHLPIVDDSDRLVGLVTHQSLRKLMRPIDLLRLRLVSEVM 165

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-------KAIGIVHFLDLLRF 338
            +N      D  +    +L+ +  +S +++V+            +GI+   DLL+F
Sbjct: 166 TRNVVSANCDQTMLEIARLMSERRVSCVVIVETQGDADHAMQIPLGILTERDLLQF 221



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQK-------LKGIITEGDIFR--NFHKDLNTLS 284
                +++   ++SE+R  CV +V+             GI+TE D+ +  +   +   + 
Sbjct: 173 NCDQTMLEIARLMSERRVSCVVIVETQGDADHAMQIPLGILTERDLLQFQSLGLNWENIR 232

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++M      I     L    QL+ Q  I   +V  +  + +GIV    LL+
Sbjct: 233 AANMMSSPLFTIRPKENLWEVQQLMEQRRIGRGIVTGERGELLGIVTQTSLLQ 285


>gi|168212558|ref|ZP_02638183.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens CPE str. F4969]
 gi|170715729|gb|EDT27911.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens CPE str. F4969]
          Length = 378

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|168208865|ref|ZP_02634490.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens B str. ATCC 3626]
 gi|170712836|gb|EDT25018.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens B str. ATCC 3626]
          Length = 378

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|110801237|ref|YP_694991.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens ATCC 13124]
 gi|168204270|ref|ZP_02630275.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens E str. JGS1987]
 gi|168216379|ref|ZP_02642004.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens NCTC 8239]
 gi|110675884|gb|ABG84871.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens ATCC 13124]
 gi|170663942|gb|EDT16625.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens E str. JGS1987]
 gi|182381308|gb|EDT78787.1| glycine betaine/L-proline transport, ATP-binding protein
           [Clostridium perfringens NCTC 8239]
          Length = 378

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|114319998|ref|YP_741681.1| cyclic nucleotide-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
 gi|114226392|gb|ABI56191.1| cyclic nucleotide-binding protein [Alkalilimnicola ehrlichii
           MLHE-1]
          Length = 629

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 25/159 (15%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-------KIGCPLIDAITILSEKRFGCVA 255
           DF  L       T+         +     L+           P+ +A  ++ + +   V 
Sbjct: 124 DFVELEKPRLETTVEKTFDHASLTTRVRKLITRSPLMLNESTPVQEAARLIRDSQNPSVL 183

Query: 256 VV---DEG------------QKLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILE 298
           V+   D+             ++L G++T+ D   R   + L     V +V  ++   I  
Sbjct: 184 VLGAPDDDPEQLTVERGGERRRLVGLVTDSDFRNRVVAEGLPPETPVGEVASRDLITIQS 243

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D  +  A   + ++NI  L V+   ++ +G++H  D+LR
Sbjct: 244 DETVQEATLSMLRNNIHHLPVL-HRRRPVGLLHLSDILR 281


>gi|209885959|ref|YP_002289816.1| putative signal-transduction protein with CBS domains [Oligotropha
           carboxidovorans OM5]
 gi|209874155|gb|ACI93951.1| putative signal-transduction protein with CBS domains [Oligotropha
           carboxidovorans OM5]
          Length = 194

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 3/128 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G     AS +  + + +  V     L+DA ++L   R   V V ++  K+ G++T  DI 
Sbjct: 45  GDAMNIASILSVTRERLITVSDKAQLVDAASLLGSGRIDLVVVCEDTGKMAGVVTRMDIV 104

Query: 274 RNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +      T SV  VM ++        LL  A + +++   + + VVDD  + +G +
Sbjct: 105 SRISRCQGHACTASVASVMSRDVIYCRPPELLETAWKRMKEKGHAHIPVVDDDNRPLGTL 164

Query: 331 HFLDLLRF 338
           +  D L+ 
Sbjct: 165 NARDALQA 172


>gi|166367342|ref|YP_001659615.1| histidine kinase like sensor protein [Microcystis aeruginosa
           NIES-843]
 gi|166089715|dbj|BAG04423.1| histidine kinase like sensor protein [Microcystis aeruginosa
           NIES-843]
          Length = 387

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 29/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE--------------------GQKLKGIITEGDI 272
           V     L DAI ++ +       + D+                    GQ+L GI+TE D+
Sbjct: 24  VPPTTSLADAIALIGQAHSRLCLLTDDLSPLAAPAGEVRVSCLLVVQGQELLGILTERDV 83

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTV---AMQLLRQHNISVLMVVDDCQKAI 327
            R   + +N    +V DVM  +P + L          A+ L R++ I  L +VDD  + I
Sbjct: 84  VRLTAQGINLSETTVADVM-VHPLITLPQQSAQDIFAALFLFRRYRIRHLPIVDDQGQLI 142

Query: 328 GIV---HFLDLLR 337
           G++       +LR
Sbjct: 143 GVISHESIRQILR 155



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/146 (21%), Positives = 59/146 (40%), Gaps = 7/146 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D   L   G   +    A  ++H   ++P  +    +  A+ +    R   + +VD
Sbjct: 78  LTERDVVRLTAQGINLSETTVADVMVHPLITLPQ-QSAQDIFAALFLFRRYRIRHLPIVD 136

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  +L G+I+   I +       L    V DVM            +    QL+ +H +S 
Sbjct: 137 DQGQLIGVISHESIRQILRPANLLRFRRVSDVMTSQVVQAPLTATVLQLAQLMAEHRVSC 196

Query: 317 LMVV----DDCQKAIGIVHFLDLLRF 338
           +++     +D    +GIV   DL++F
Sbjct: 197 VVITQRDSEDNDCPVGIVTERDLVQF 222



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 50/118 (42%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFR--NFHKD 279
               +    +   ++    +++E R  CV +     ++     GI+TE D+ +      D
Sbjct: 169 MTSQVVQAPLTATVLQLAQLMAEHRVSCVVITQRDSEDNDCPVGIVTERDLVQFQAVQID 228

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+    + VM     ++  +  L  A Q +++  +  L+V  +  + +GIV    LLR
Sbjct: 229 LHKTRAQTVMSTPLFLLSPEDSLWTAHQEMQKRRVGRLVVSWNWGRGLGIVTQTSLLR 286


>gi|118577173|ref|YP_876916.1| IMP dehydrogenase/GMP reductase [Cenarchaeum symbiosum A]
 gi|118195694|gb|ABK78612.1| IMP dehydrogenase/GMP reductase [Cenarchaeum symbiosum A]
          Length = 474

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 64/186 (34%), Gaps = 12/186 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLG 214
            +   + L            P  SA M      A+A+ +            ++H    + 
Sbjct: 22  TSRSQVDLGTRLSRNISINMPLISANMDTVTESAMAVTMAREGGIG-----IIHRFLTMQ 76

Query: 215 TLFVCASDVMHS----GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
                   V  S     ++   +     + DA     +K    + V     KL GI+TE 
Sbjct: 77  EQVDEVLKVKRSGSVVIENPYTISPEQTVHDAAAYAEDKGVSGLLVAGPDSKLVGILTER 136

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F +D  +  V D+M K+      D     A +L+ ++ I  L +VD      G++
Sbjct: 137 DM--EFEED-TSRPVRDLMTKDVVTAGPDIGPGEARRLMHKNRIEKLPLVDGSGTIRGLI 193

Query: 331 HFLDLL 336
              D+ 
Sbjct: 194 TSKDIT 199


>gi|297568229|ref|YP_003689573.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924144|gb|ADH84954.1| CBS domain containing membrane protein [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 150

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 28/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    P+    ++L E+R     VVDE  +L G++TE D+                    
Sbjct: 15  VSPDLPVEKLASLLWERRISGAPVVDEQGELVGVVTESDLIDQAKKLHIPTAIAVLEAVI 74

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                R   ++LN +   +V+D+    P  +  DT L     ++ + ++  L V+D   K
Sbjct: 75  YLERGRKVEEELNKMAGSTVKDICTTKPATVAPDTPLDEIATVMAEKHLHTLPVMD-RGK 133

Query: 326 AIGIVHFLDLLRF 338
            +G+V   D++R 
Sbjct: 134 LVGVVGKADVIRA 146



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+M      +  D  +     LL +  IS   VVD+  + +G+V   DL+
Sbjct: 4   AKDIMTAEVITVSPDLPVEKLASLLWERRISGAPVVDEQGELVGVVTESDLI 55



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V    PL +  T+++EK    + V+D   KL G++ + D+ R  
Sbjct: 98  CTTKPATVAPDTPLDEIATVMAEKHLHTLPVMDR-GKLVGVVGKADVIRAL 147


>gi|223985075|ref|ZP_03635171.1| hypothetical protein HOLDEFILI_02476 [Holdemania filiformis DSM
           12042]
 gi|223962897|gb|EEF67313.1| hypothetical protein HOLDEFILI_02476 [Holdemania filiformis DSM
           12042]
          Length = 275

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 71/161 (44%), Gaps = 4/161 (2%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +E + +         A E + + K ++++ GIG S      LA+ L   G          
Sbjct: 103 VEVTFENNKEETIQQACEMLTSAK-KIILFGIGSSNLFCEYLANQLVKMGLLCVTSQTPH 161

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +  +    +D ++ ++S SG + E+      A+   +P+IA+T   K+ +   AD++L
Sbjct: 162 TIYSLIDQSKKDTVLFLISESGETREVIKAASIAKEHDMPIIAMTRMAKNTLHSFADLIL 221

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE 201
                       +  TT    QL + DAL + +++S NF++
Sbjct: 222 KTVSFETETRLNV--TTMRCSQLYLIDALYLNIMKS-NFNK 259


>gi|126701088|ref|YP_001089985.1| hypothetical protein CD3465 [Clostridium difficile 630]
 gi|254977089|ref|ZP_05273561.1| hypothetical protein CdifQC_17333 [Clostridium difficile QCD-66c26]
 gi|255094417|ref|ZP_05323895.1| hypothetical protein CdifC_17436 [Clostridium difficile CIP 107932]
 gi|255102674|ref|ZP_05331651.1| hypothetical protein CdifQCD-6_17826 [Clostridium difficile
           QCD-63q42]
 gi|255308495|ref|ZP_05352666.1| hypothetical protein CdifA_18036 [Clostridium difficile ATCC 43255]
 gi|255316169|ref|ZP_05357752.1| hypothetical protein CdifQCD-7_17524 [Clostridium difficile
           QCD-76w55]
 gi|255518830|ref|ZP_05386506.1| hypothetical protein CdifQCD-_17063 [Clostridium difficile
           QCD-97b34]
 gi|255652009|ref|ZP_05398911.1| hypothetical protein CdifQCD_17625 [Clostridium difficile
           QCD-37x79]
 gi|255657419|ref|ZP_05402828.1| hypothetical protein CdifQCD-2_17366 [Clostridium difficile
           QCD-23m63]
 gi|260684984|ref|YP_003216269.1| hypothetical protein CD196_3255 [Clostridium difficile CD196]
 gi|260688642|ref|YP_003219776.1| hypothetical protein CDR20291_3301 [Clostridium difficile R20291]
 gi|296449015|ref|ZP_06890805.1| CBS domain protein [Clostridium difficile NAP08]
 gi|296879838|ref|ZP_06903811.1| CBS domain protein [Clostridium difficile NAP07]
 gi|306521751|ref|ZP_07408098.1| hypothetical protein CdifQ_19995 [Clostridium difficile QCD-32g58]
 gi|115252525|emb|CAJ70368.1| conserved hypothetical protein [Clostridium difficile]
 gi|260211147|emb|CBA66586.1| conserved hypothetical protein [Clostridium difficile CD196]
 gi|260214659|emb|CBE07281.1| conserved hypothetical protein [Clostridium difficile R20291]
 gi|296262108|gb|EFH08913.1| CBS domain protein [Clostridium difficile NAP08]
 gi|296429127|gb|EFH15001.1| CBS domain protein [Clostridium difficile NAP07]
          Length = 153

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 58/149 (38%), Gaps = 27/149 (18%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN- 275
            +  +        + + K    + D   +L  ++ G + VVD   ++ GII+E DI +  
Sbjct: 1   MMDKTAKEIMTTDVIVAKQDDSIADVANMLIAEKIGGLPVVDSENRVVGIISETDILKKE 60

Query: 276 -----------------------FHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLL 309
                                    KD+  +    V ++M K+   + ED        ++
Sbjct: 61  KYIEAPLYINLLQGLIFLDDLKKVEKDIKQVAAYKVGELMSKDIIKVHEDDKFDDVANVM 120

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +I+ + VVDD  K  GI+   D+++ 
Sbjct: 121 IKKSINRVPVVDDDNKLKGIICRYDIIKA 149



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               I  V       D   ++ +K    V VVD+  KLKGII   DI +  
Sbjct: 100 MSKDIIKVHEDDKFDDVANVMIKKSINRVPVVDDDNKLKGIICRYDIIKAL 150


>gi|89897037|ref|YP_520524.1| hypothetical protein DSY4291 [Desulfitobacterium hafniense Y51]
 gi|89336485|dbj|BAE86080.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 174

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 59/166 (35%), Gaps = 34/166 (20%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F +N F   H G     +            ++  +     + +   +L +     V V+D
Sbjct: 11  FRQNMFQGNHKGVLAMKVQD------IMQTNVITISPNTEIREIAKLLCDHHISGVPVID 64

Query: 259 EGQKLKGIITEGDIF------------------------RNFHKDLNT---LSVEDVMIK 291
               L GI++EGD+                         + +  DL     L   ++M  
Sbjct: 65  LFGNLIGIVSEGDLLHKETHPRVPEAVGFLGALIYYRGVKQYESDLKKLVALKASEIMTH 124

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               + +D  +  A  L+  HN+  L ++ +  K +GI+   D+++
Sbjct: 125 EVITLDKDASIEEAASLMINHNVKRLPIM-ENGKMVGIITRKDVIK 169


>gi|312111282|ref|YP_003989598.1| RpiR family transcriptional regulator [Geobacillus sp. Y4.1MC1]
 gi|311216383|gb|ADP74987.1| transcriptional regulator, RpiR family [Geobacillus sp. Y4.1MC1]
          Length = 286

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 68/180 (37%), Gaps = 7/180 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K++      +     K  + +  +++      +   A E +   + +++  G+G S    
Sbjct: 94  KDTPYDLFNKVTYVNKAAVEATTTTIDKR---ELEKAAEAMVKAR-KILFYGVGGSAASA 149

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  S            +  +   D+ + +S SG + ++  I+ +A++ + 
Sbjct: 150 MDACYKFTKLGYVSVMSPDFHTMLPLVANLEEGDVFVAISTSGRTKDVLEIVRFAKKHAA 209

Query: 140 PLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT  +  S +   ADI L LP   +    G     S + QL I DAL +       
Sbjct: 210 TVIAITKLDTSSPLYKEADIKLCLPDVEQDHRIG--SMASRMTQLNIIDALYLITFHRMG 267


>gi|291300985|ref|YP_003512263.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290570205|gb|ADD43170.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 342

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 63/168 (37%), Gaps = 6/168 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +    E   ++     L  +       AV+ +   + RV   G+G SG +G  L   L  
Sbjct: 112 KVAANETLSIADTAEILDRD---ALARAVDCVLNAR-RVDSFGVGASGFVGLDLQQKLTR 167

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +      +A+      +    + I +S +G++      L  A       IAIT+ +
Sbjct: 168 IGRTALSWLDTDAAWSAAVTLDEQCVAIAISHTGTTAATVEFLAMAAAEGATTIAITNHD 227

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            + +A  AD+VLT          G     S I QL + D L   +  +
Sbjct: 228 NTALAETADVVLTTAARETRFRSGAL--GSRIAQLMVVDCLFTGVARA 273


>gi|254508112|ref|ZP_05120238.1| transcriptional regulator [Vibrio parahaemolyticus 16]
 gi|219548947|gb|EED25946.1| transcriptional regulator [Vibrio parahaemolyticus 16]
          Length = 284

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     S Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDSMQINRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +D+++++S +G +  L  I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCTDNDVVVLISHTGRTKSLVEIANLARENGATVIAITAK-DSPLDKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSISLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|218282087|ref|ZP_03488386.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
 gi|218216880|gb|EEC90418.1| hypothetical protein EUBIFOR_00961 [Eubacterium biforme DSM 3989]
          Length = 216

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 13/116 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLN 281
           +    +   I ++ EK    V VV E  +L G+ITEG I  +             +  L+
Sbjct: 16  EPDATISQIIDLMKEKEIHRVPVV-EKGQLVGLITEGMISNSGTTNATSLSIYELNYLLS 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +V  VM+K    + E+ L+  A Q + ++NI  L V++   +  GIV   D+ +
Sbjct: 75  KTTVSTVMVKKVISVDENELMEYATQKMLKNNIGCLPVINASGEVTGIVTQNDVFK 130



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             V+D M KN      D  ++  + L+++  I  + VV+   + +G++ 
Sbjct: 2   FKVKDYMTKNVICAEPDATISQIIDLMKEKEIHRVPVVEK-GQLVGLIT 49


>gi|298490920|ref|YP_003721097.1| Cl- channel voltage-gated family protein ['Nostoc azollae' 0708]
 gi|298232838|gb|ADI63974.1| Cl- channel voltage-gated family protein ['Nostoc azollae' 0708]
          Length = 859

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 4/101 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + + I   S        VV E  KL G++TE D+ +          + ++M   P  
Sbjct: 454 QMSVDEVIQAFSRSHHRGFPVV-ENCKLVGVVTESDLQKI--PVSRDTPLREIMRPQPVT 510

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     L+  + LL ++ IS L VV + QK +GI+   D++
Sbjct: 511 VTPKQTLSNVLYLLDRYQISRLPVV-ERQKLVGIITRADII 550


>gi|148653065|ref|YP_001280158.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter sp. PRwf-1]
 gi|148572149|gb|ABQ94208.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter sp. PRwf-1]
          Length = 490

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AI + +          ++H    +    +    V      +  
Sbjct: 41  NLPIISAAMDTVTESEMAITMAQLGG-----MGIVHKNMDIDRQAMQVRRVKKFEAGTVV 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + I  E     V VV+ G  ++ GI+T  D+   F  + +   V +
Sbjct: 96  DPITVTPDISVGELLRITHENNISGVPVVEAGSGQVVGIVTHRDVR--FETN-HNQPVSN 152

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM        + E        +LL +H I  ++VVDD     G++   D  + 
Sbjct: 153 VMTPQDKLVTVKEGESNENIKKLLHEHRIEKVLVVDDNFGLKGMITVNDFNKA 205


>gi|90425521|ref|YP_533891.1| CBS domain-containing protein [Rhodopseudomonas palustris BisB18]
 gi|90107535|gb|ABD89572.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           BisB18]
          Length = 141

 Score = 74.9 bits (183), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 50/116 (43%), Gaps = 11/116 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------KDLNT 282
           V+    + +   +     +    V +E  ++ G++T+ D  + F            +L  
Sbjct: 20  VRRDMTMRELQDLFKRDDYNAYPV-EEDGEVIGLVTKYDFLKCFAFAPIHMVPHYDELMN 78

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V DVM  +   +  +  LT  +QL+  H    + VVD+ +K +GI+   D++  
Sbjct: 79  RTVGDVMTPDFIYVHPEIKLTRVLQLMIDHQTRSIPVVDNDRKLMGIISREDIMHA 134



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 35/94 (37%), Gaps = 2/94 (2%)

Query: 184 AIGDALAIALLESRNFSEN-DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
              D   I L+   +F +   F  +H       L       + + D I  V     L   
Sbjct: 43  VEEDGEVIGLVTKYDFLKCFAFAPIHMVPHYDELMNRTVGDVMTPDFIY-VHPEIKLTRV 101

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + ++ + +   + VVD  +KL GII+  DI    
Sbjct: 102 LQLMIDHQTRSIPVVDNDRKLMGIISREDIMHAL 135


>gi|295703928|ref|YP_003597003.1| CBS domain pair family protein [Bacillus megaterium DSM 319]
 gi|294801587|gb|ADF38653.1| CBS domain pair family protein [Bacillus megaterium DSM 319]
          Length = 141

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
             +     +   ++     G + +  E  KL G+IT+ D+  +    + N    + +++ 
Sbjct: 14  CNLKSSCGEVANMMKNLDVGVIPIC-EDNKLIGLITDRDLVIKGLANNFNANTQISEMIT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +     + T +  AM+++ Q+ I  L +VDD  K IG+V   DL
Sbjct: 73  TDVITGTKHTSVEQAMEIMSQYQIRRLPIVDD-GKLIGMVSLGDL 116



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + +VM  N +     +       +++  ++ V+ +  +  K IG++   DL+  G+
Sbjct: 3   ITEVMTSNIETCNLKSSCGEVANMMKNLDVGVIPIC-EDNKLIGLITDRDLVIKGL 57


>gi|260060968|ref|YP_003194048.1| CBS domain-containing protein [Robiginitalea biformata HTCC2501]
 gi|88785100|gb|EAR16269.1| CBS domain protein [Robiginitalea biformata HTCC2501]
          Length = 172

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
           +    +++ +   +  R     V+D+   L GI++E D        R F++ +   SVE 
Sbjct: 53  RPDQSILEVMEAFTRHRISGGPVLDDNGFLVGIVSEADCMKQISESRYFNQPILDKSVER 112

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M K  + I  D  +  A  +  ++N   L V+      IG +   D++
Sbjct: 113 FMTKEVETIPHDMSIFDAAGVFHKNNRRRLPVM-KDGLLIGQISRKDIV 160



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 24/53 (45%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D M +N      D  +   M+   +H IS   V+DD    +GIV   D ++
Sbjct: 41  VSDYMTRNLVTFRPDQSILEVMEAFTRHRISGGPVLDDNGFLVGIVSEADCMK 93


>gi|218458413|ref|ZP_03498504.1| hypothetical protein RetlK5_02718 [Rhizobium etli Kim 5]
          Length = 144

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 45/108 (41%), Gaps = 4/108 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIKN 292
              + +A  ILS+K+ G + VV    ++ G+ TE D+     K         +  VM   
Sbjct: 22  NTTVAEAAVILSKKKIGAIVVVGMDNRISGMFTERDLVHAIAKHGKEGLDQPLAQVMTAK 81

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                E+T +   M+L+       + V +   K  GI+   D+++  I
Sbjct: 82  VYRCHEETTVNELMELMTSRRFRHVPV-ESNGKLAGIISIGDVVKSRI 128



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVVTAGSNTTVAEAAVILSKKKIGAIVVVGMDNRISGMFTERDLVHA 61


>gi|88799911|ref|ZP_01115483.1| inositol-5-monophosphate dehydrogenase [Reinekea sp. MED297]
 gi|88777342|gb|EAR08545.1| inositol-5-monophosphate dehydrogenase [Reinekea sp. MED297]
          Length = 489

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 63/171 (36%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +     ++  +    S V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIVHKNLTIEEQAREVRKVKKYESGVVR---NP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + I + SE     V V+D G  L GI+T  D+    +++     V  +M 
Sbjct: 98  ITIDADATVAELIALTSENSISGVPVLD-GGDLVGIVTSRDVRFETNQN---AKVSAIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E        +LL  H I  ++VVD   +  G++   D+ +  
Sbjct: 154 PREKLVTVNEGESKDKVRELLHVHRIEKVLVVDADFRLTGMMTVKDIEKAK 204


>gi|268317170|ref|YP_003290889.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
 gi|262334704|gb|ACY48501.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Rhodothermus marinus DSM 4252]
          Length = 636

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 40/103 (38%), Gaps = 2/103 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
                   +    +  +    V VV    +L G++T  D+ R   +  +    V  +M  
Sbjct: 169 CTPEHTAQEVARQMLRRGVSSV-VVLRNGRLAGLVTGADLRRLVARGGSPNTPVRRLMSA 227

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             + I     L  AM  +  H +  L+VVD  ++ +G++   D
Sbjct: 228 PVQTIAASATLFDAMMQMLTHGVHRLVVVDADERPLGVLTDRD 270



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  +     L DA+  +       + VVD  ++  G++T+ D+     +D
Sbjct: 225 MSAPVQTIAASATLFDAMMQMLTHGVHRLVVVDADERPLGVLTDRDVAHWRGQD 278


>gi|212212288|ref|YP_002303224.1| CBS domain containing protein [Coxiella burnetii CbuG_Q212]
 gi|212010698|gb|ACJ18079.1| CBS domain containing protein [Coxiella burnetii CbuG_Q212]
          Length = 125

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + V  E  KL G +T+ DI  +     KD    ++ DVM +  + 
Sbjct: 1   MKEAAKKMKQLDCGFIPV-GENNKLIGTVTDRDIVLHAAAQGKDPGNTALRDVMSEGVEY 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             E+  L  A + + +  I  L+V++D ++  GI+   D+ R
Sbjct: 60  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIAR 101



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDV 288
                 L +A   +  K+   + V+++ +++ GI++ GDI  R+   DL   +VE +
Sbjct: 60  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIARRSQDDDLCAQAVEGI 116


>gi|229543156|ref|ZP_04432216.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
 gi|229327576|gb|EEN93251.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
          Length = 289

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 59/158 (37%), Gaps = 4/158 (2%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            S+    +      +EKI A+  +   + + GIG S           +  G P       
Sbjct: 109 QSITQTANLLETSCIEKITAMVDKSPAIYVYGIGASHVAAEDFTHKFSRIGKPVVHTLDH 168

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L   ++D + + +S SG ++E   +   A++  +  + IT +  S +A   D  
Sbjct: 169 HLLGSSLINASKDCMFVAISNSGETNEAIKLTQIAKQNGLFTVGITQKRDSTLASIVDAP 228

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           L +    E+     A TTS   QL   D L  A +   
Sbjct: 229 L-IHHGGEAVLLRSAATTSLAAQLFTIDVLYFAYVAKH 265


>gi|124485137|ref|YP_001029753.1| hypothetical protein Mlab_0310 [Methanocorpusculum labreanum Z]
 gi|124362678|gb|ABN06486.1| CBS domain containing protein [Methanocorpusculum labreanum Z]
          Length = 284

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 43/99 (43%), Gaps = 6/99 (6%)

Query: 241 DAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
           D + IL       V VV    +KL GI+T  DI R          V  +M   P  I  +
Sbjct: 25  DVLRILKRTGISGVPVVKGPEKKLLGIVTRKDILRK----PEETQVALLMSSEPLTIRPE 80

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L+ A +++ + N+  L VV+     IGI+   DL+  
Sbjct: 81  VTLSEAAEIMTKMNVRRLPVVEGDN-LIGILSVSDLVGA 118



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED-VMIK 291
           ++    L +A  I+++     + VV EG  L GI++  D+     K  +   +    + K
Sbjct: 77  IRPEVTLSEAAEIMTKMNVRRLPVV-EGDNLIGILSVSDLVGAVAKLRDVREIRHGFVSK 135

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               + E+T L V  +++   +   + +++   +  GI+   DL+R
Sbjct: 136 RTYAMWEETPLPVVGRIMELAHTDAMPILNSENQLTGIISERDLIR 181



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLLRF 338
            +D M K+   +   +     +++L++  IS + VV    +K +GIV   D+LR 
Sbjct: 6   AKDYMTKDVVTVEIPSGRDDVLRILKRTGISGVPVVKGPEKKLLGIVTRKDILRK 60



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 19/141 (13%), Positives = 48/141 (34%), Gaps = 36/141 (25%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKD------------ 279
               PL     I+       + +++   +L GII+E D+ R  +   D            
Sbjct: 141 WEETPLPVVGRIMELAHTDAMPILNSENQLTGIISERDLIRCSSIEDDVQTSDFSTGTDD 200

Query: 280 ----------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                 L    V+  M++    +  +  ++     +++  +  +
Sbjct: 201 DEWTWESIRDNHTISYGVSKVELPNRPVKVCMVRKVIAVPNNAEVSDCALRMKRGRVDQM 260

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            ++D+ Q+  G++   DL++ 
Sbjct: 261 PIIDNDQRLSGMLFDRDLIKA 281



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 10/68 (14%), Positives = 23/68 (33%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G            +     +  V     + D    +   R   + ++D  Q+L G++ + 
Sbjct: 217 GVSKVELPNRPVKVCMVRKVIAVPNNAEVSDCALRMKRGRVDQMPIIDNDQRLSGMLFDR 276

Query: 271 DIFRNFHK 278
           D+ +   K
Sbjct: 277 DLIKALIK 284


>gi|302308153|ref|NP_984977.2| AER117Wp [Ashbya gossypii ATCC 10895]
 gi|299789320|gb|AAS52801.2| AER117Wp [Ashbya gossypii ATCC 10895]
          Length = 522

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 75/187 (40%), Gaps = 10/187 (5%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            +  V+   +  +         +S +  +   D A+ +ALL       ++         +
Sbjct: 51  PSSEVVLSSRLTKKITLNAPFVSSPMDTVTEADMAIHMALLGGIGIIHHNCTAEEQAEMV 110

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEG 270
             +    +  +++     +V     + D   + +E  F    V D+G    KL+GIIT  
Sbjct: 111 RRVKKYENGFINA---PVVVGPDATVADVRRMKNEFGFAGFPVTDDGKPTGKLQGIITSR 167

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI   F +D  TL V ++M K+     +   L  A Q+L+      L +VD+    + ++
Sbjct: 168 DI--QFVED-ETLLVSEIMTKDVITGKQGINLEEANQILKNTKKGKLPIVDEAGCLVSML 224

Query: 331 HFLDLLR 337
              DL++
Sbjct: 225 SRTDLMK 231


>gi|256391175|ref|YP_003112739.1| signal transduction protein with CBS domains [Catenulispora
           acidiphila DSM 44928]
 gi|256357401|gb|ACU70898.1| putative signal transduction protein with CBS domains
           [Catenulispora acidiphila DSM 44928]
          Length = 138

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
                  +     L  A  ++ E   G + V DE ++L GIIT+ DI         D + 
Sbjct: 8   MHPGAQWISREETLDRAAQLMRELDVGALPVSDENERLCGIITDRDIVVKCVALSLDPSH 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   D+    P+ I     +   +  +    I  + VV + ++ +G++   DL
Sbjct: 68  IRCADLCEGTPRWIDAGADVGEVLHEMESRRIRRMPVV-EDKQLVGMISEADL 119



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M    + I  +  L  A QL+R+ ++  L V D+ ++  GI+   D++
Sbjct: 2   ATAKDIMHPGAQWISREETLDRAAQLMRELDVGALPVSDENERLCGIITDRDIV 55


>gi|147918830|ref|YP_687444.1| putative hexulose-6-phosphate isomerase [uncultured methanogenic
           archaeon RC-I]
 gi|110622840|emb|CAJ38118.1| putative hexulose-6-phosphate isomerase [uncultured methanogenic
           archaeon RC-I]
          Length = 211

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 9/138 (6%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q    ++I+    L ++  S+      +F      +     R+ + G G+SG +    A 
Sbjct: 18  QVVTDTMISIADSLINIADSIDASNLDEFAS----MLTSANRIFVMGAGRSGLVAKSFAM 73

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G   + V            +T  D+++ +S SG++  +       ++ ++ L+ +
Sbjct: 74  RLMHIGFQVYVVGEIITP-----AVTAGDVVVAISGSGNTRTISEFGEICKKLNVKLVTV 128

Query: 145 TSENKSVVACHADIVLTL 162
           T+   S +   +D+V+ L
Sbjct: 129 TTNKDSALGRMSDLVVIL 146


>gi|146299410|ref|YP_001194001.1| signal-transduction protein [Flavobacterium johnsoniae UW101]
 gi|146153828|gb|ABQ04682.1| putative signal-transduction protein with CBS domains
           [Flavobacterium johnsoniae UW101]
          Length = 141

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V+    + +A+ ++ +K  G + ++D G  LKGI++E D  R      K      V ++M
Sbjct: 17  VRSTTTVYEALKVMGDKNIGAILIID-GTDLKGILSERDYARKIVLKDKSSKETFVHEIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             N   +     +   M+L+    I  L V+ +    +GI+   D+++ 
Sbjct: 76  ESNVFTVQLSNNIDDCMELMSSKRIRHLPVL-ENGTVVGIISISDVVKA 123


>gi|53803478|ref|YP_114817.1| CBS domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53757239|gb|AAU91530.1| CBS domain protein [Methylococcus capsulatus str. Bath]
          Length = 449

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 49/157 (31%), Gaps = 21/157 (13%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D Y           F   +            + G  L      +       + VVD G+ 
Sbjct: 275 DIYHFAASRAFRRTFGKTTCAGIMTPEPLTAEFGDDLESVWRRMQRHGIRALPVVDRGRH 334

Query: 263 LKGIITEGDIFRNFHKDLNTLS---------------------VEDVMIKNPKVILEDTL 301
           + GI+T  D FR+   D                          V  +M         D  
Sbjct: 335 VIGIVTFKDFFRHAPADGFGSLKARLKALLLPSPRVTSTKPEVVGQIMTAPAITARHDAP 394

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +LL +H I  + +VD+ +K +G+V   DL+  
Sbjct: 395 IVELARLLSEHGIHQVPIVDERRKLVGLVTQTDLIAA 431



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 26/45 (57%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +   P+++   +LSE     V +VDE +KL G++T+ D+    ++
Sbjct: 390 RHDAPIVELARLLSEHGIHQVPIVDERRKLVGLVTQTDLIAALYR 434


>gi|14591601|ref|NP_143683.1| hypothetical protein PH1855 [Pyrococcus horikoshii OT3]
 gi|3258293|dbj|BAA30976.1| 172aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 172

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 54/151 (35%), Gaps = 17/151 (11%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
                               +        V+   PL D I+  S +    V VVD+  KL
Sbjct: 17  MSRREELSYNIKYISKVPVRIVMDKDFLKVRPETPLFDLISRFSSEETSAV-VVDDEGKL 75

Query: 264 KGIITEGDI-------FRNFHKDL---------NTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            G IT  D+        R                   VED+MI+ P VI  +  L  A++
Sbjct: 76  IGFITMKDLLHYFVPPRRYSIAGFGMLKKYTLSRATRVEDIMIRRPIVINVNDDLGQAIK 135

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ +     L V+D  ++  G++   D++R 
Sbjct: 136 LMVETGKHHLPVIDRERRVHGLLEVKDIIRL 166


>gi|323465293|gb|ADX77446.1| 6-phospho 3-hexuloisomerase [Staphylococcus pseudintermedius ED99]
          Length = 182

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/169 (23%), Positives = 65/169 (38%), Gaps = 10/169 (5%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              +     +R +    S +  +   QF   V   +A    V +TG G+SG + +  A  
Sbjct: 2   AIQQQFERIRREIVQTLSQVDDQAIAQFEQVVSDAEA----VFVTGKGRSGFVANGFAMR 57

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +  V  A         I + D++IV+S SGS+  LK +   A      +  +T
Sbjct: 58  LNQLGKKAHVVGEATTP-----SIQKGDVLIVISGSGSTTHLKLLADKAHEVGATIALVT 112

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGL-APTTSAIMQLAIGDALAIAL 193
           +   S +   A++ L LP   +    G   P  S   Q A      + L
Sbjct: 113 TATDSKIGELANVTLILPAGTKYQAEGSEQPLGSLFEQSAQLMLDGVVL 161


>gi|239628473|ref|ZP_04671504.1| transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]
 gi|239518619|gb|EEQ58485.1| transcriptional regulator [Clostridiales bacterium 1_7_47FAA]
          Length = 284

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 66/169 (39%), Gaps = 6/169 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  Q A + + +    L    S L+ E    F   +E     K R+   G+G S     
Sbjct: 94  DSFAQVAQKVLASNIDALRETHSLLKRE---NFEKVIECFHRAK-RICFYGVGTSMTTAM 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           K A          + V  +         +++ +  +V S+SG++ +   +   A++    
Sbjct: 150 KAADKFLKIEPKVYCVADSHMQAMMASTMSKGETAVVFSYSGATKDTIHVAELAKKAGAD 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++ IT   KS +  + D+VL         P     +++ I QL + D L
Sbjct: 210 IVCITRFIKSPLTAYGDMVLLCG--ANESPLQAGSSSAEISQLFLIDLL 256


>gi|150401061|ref|YP_001324827.1| signal-transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013764|gb|ABR56215.1| putative signal-transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 189

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 59/126 (46%), Gaps = 6/126 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             + +  S+VM++      V +     +   IL  K  G + +V    K  GIITE D+ 
Sbjct: 1   MEINLRVSEVMNTPVET--VSLDATCYEVANILKVKDIGALTIVGGMSKPVGIITETDML 58

Query: 274 RNF-HKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +N   K+L +  V  +++       I  +  +  A +L+ + NI  L V+++ +  +GI+
Sbjct: 59  KNIVAKNLRSKDVLVKEIASLKLISISPNDSIMDAAELMAKKNIKRLPVIENDE-LLGII 117

Query: 331 HFLDLL 336
              D++
Sbjct: 118 TVSDII 123



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L V +VM    + +  D        +L+  +I  L +V    K +GI+   D+L+
Sbjct: 4   NLRVSEVMNTPVETVSLDATCYEVANILKVKDIGALTIVGGMSKPVGIITETDMLK 59


>gi|42519866|ref|NP_965796.1| hypothetical protein LJ1817 [Lactobacillus johnsonii NCC 533]
 gi|41584156|gb|AAS09762.1| hypothetical protein LJ_1817 [Lactobacillus johnsonii NCC 533]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 2/143 (1%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
              V++I     R++  G+G SG + + L       G    +      +  ++G  T +D
Sbjct: 120 SKLVKEINQAS-RILAYGVGASGLVANDLYQKFLRLGKAITYTTDFHIAATEIGNFTPND 178

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++I++S  G + E+  +L   +   I  + +T++ ++ +A  AD+VL L ++        
Sbjct: 179 ILILISNQGMTTEISDLLEVGKSVGIKTVLLTAQPRTAIAKKADLVL-LTQDIGEPKIRS 237

Query: 174 APTTSAIMQLAIGDALAIALLES 196
             TTS I QL + D L  A +  
Sbjct: 238 GATTSMISQLFVVDVLVFAYISR 260


>gi|18309539|ref|NP_561473.1| glycine betaine/carnitine/choline ABC transporter [Clostridium
           perfringens str. 13]
 gi|18144216|dbj|BAB80263.1| probable glycine betaine/carnitine/choline ABC transporter
           [Clostridium perfringens str. 13]
          Length = 378

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 54/104 (51%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  + ++ ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRALSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|268323709|emb|CBH37297.1| conserved hypothetical protein, CBS domain containing [uncultured
           archaeon]
          Length = 290

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 54/128 (42%), Gaps = 7/128 (5%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K           +   D   +   G      + +   K    V V+ +G ++ G++T  
Sbjct: 1   MKGKESEGTKVRDVMVDDVAYVTVPGTR-EQLMDVCKSKHISGVPVL-KGGRVVGVVTRQ 58

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ RN  ++     +  +M +NP +I  +  +  A +++  H I  L VV   +K +G++
Sbjct: 59  DVLRNRDEN----QIALLMHRNPIIISPEATIAEAAEIILSHGIRRLPVV-VGEKLVGLI 113

Query: 331 HFLDLLRF 338
              DL+R 
Sbjct: 114 TIADLIRE 121



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 52/116 (44%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +  ++     + +A  I+       + VV  G+KL G+IT  D+ R   K     S+
Sbjct: 73  MHRNPIIISPEATIAEAAEIILSHGIRRLPVVV-GEKLVGLITIADLIREIAKRDYEESI 131

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            + +  N   + +D  L+V  +++    +    V++   + +G++  LDL+   +I
Sbjct: 132 SNYIGDNTMAVWDDMPLSVVGRIMELARVKAAPVLNLELELVGLITDLDLINVVVI 187



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 50/141 (35%), Gaps = 36/141 (25%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------NFHKD 279
           V    PL     I+   R     V++   +L G+IT+ D+               +   D
Sbjct: 142 VWDDMPLSVVGRIMELARVKAAPVLNLELELVGLITDLDLINVVVIEDTTEQSDLSLGSD 201

Query: 280 LNTLS-----------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            +  +                       V+DV++K+   +  ++ ++   + + ++    
Sbjct: 202 EDAWTWEGMRDTMRLYYDVSKIKLPDKLVKDVLVKDVITVTRNSEVSDCAKKMSENKFDQ 261

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V+    K  G++   DLLR
Sbjct: 262 LPVISARGKLTGMLIDRDLLR 282


>gi|302878359|ref|YP_003846923.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Gallionella capsiferriformans ES-2]
 gi|302581148|gb|ADL55159.1| diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF
           sensor(s) [Gallionella capsiferriformans ES-2]
          Length = 1301

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 2/105 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS 284
               +  V   C + DA   +++ R   + V+ +   L GIITE D+ R+          
Sbjct: 10  MNRQVRHVLPDCTIGDAAKQMNDARMSSLLVMSDNTPL-GIITERDLLRHLSAHTSRQTP 68

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           V ++M         DT  T A   +  H++  L+VVD     IG+
Sbjct: 69  VSEIMSHPVLTAAPDTGFTAAYSQVLNHHVRHLVVVDGKGGVIGL 113



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 6/139 (4%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE DF   H G  L         VM     +P ++    L DA+ ++ + R     VV E
Sbjct: 115 SETDF-RNHLGADLLRKLDDLQAVM--DHKLPQLRPEDKLSDAVAMMLQDRTSYALVV-E 170

Query: 260 GQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                GI+TE D+   F     +  +S+ +VM      +   T +     L++      L
Sbjct: 171 NGLPLGILTERDMAGLFVNGAPVEGVSLREVMHSPVLTVSHQTPVFEMAGLMQASRYRHL 230

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +VVDD    +G+V    L+
Sbjct: 231 VVVDDAGLVLGMVTLHKLM 249



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 42/108 (38%), Gaps = 5/108 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKN 292
                  A + +       + VVD    + G+ +E D   +   DL      ++ VM   
Sbjct: 82  PDTGFTAAYSQVLNHHVRHLVVVDGKGGVIGLASETDFRNHLGADLLRKLDDLQAVMDHK 141

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              +  +  L+ A+ ++ Q   S  +VV +    +GI+   D+   G+
Sbjct: 142 LPQLRPEDKLSDAVAMMLQDRTSYALVV-ENGLPLGILTERDM--AGL 186



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  L++ D+M +  + +L D  +  A + +    +S L+V+ D    +GI+   DLLR
Sbjct: 1   MMELTLADIMNRQVRHVLPDCTIGDAAKQMNDARMSSLLVMSD-NTPLGIITERDLLR 57


>gi|218185780|gb|EEC68207.1| hypothetical protein OsI_36187 [Oryza sativa Indica Group]
          Length = 575

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
             L    S +  +  ++ +V  G  ++ A   + E      AVV  G K +GI+T  D +
Sbjct: 223 QMLRPSLSTITTAESTVVIVSPGDSVLTATQKMVE-VHASSAVVAVGNKAQGILTSRDIL 281

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R   K+L  ++  VE VM  +P+    D  +  A++ +++     L V+D     + I+
Sbjct: 282 MRMIAKNLPADSTPVEKVMTLDPECATVDMPILDALRTMQERKFLHLPVMDRDGSIVSIL 341

Query: 331 HFLDLLRF 338
             +D+   
Sbjct: 342 DVIDITHA 349



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 49/121 (40%), Gaps = 20/121 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG-------------DIF-RNFHK 278
           V     +++A   ++ +R     + D    L GI+T+              DI  R   +
Sbjct: 62  VPESTTVLEACRRMAARRADAALLTDSNALLCGILTDKACTPPKEHWMINQDIATRVIAR 121

Query: 279 DL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +L  +      VM ++P  +  +TL   A+  + Q     L VV++ +    ++  LD+ 
Sbjct: 122 ELKIDETPAWKVMTRHPVFVPSETLAVEALHKMVQGKFRHLPVVENGE----VIAMLDIA 177

Query: 337 R 337
           +
Sbjct: 178 K 178


>gi|197121232|ref|YP_002133183.1| nucleotidyltransferase [Anaeromyxobacter sp. K]
 gi|196171081|gb|ACG72054.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter sp. K]
          Length = 603

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/184 (15%), Positives = 57/184 (30%), Gaps = 24/184 (13%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSE----NDFYVLHPGGKLGTLFVCASDVMHSGDS 229
               + +      D LA  L   + F        F      G    L         +   
Sbjct: 85  ISGKATLDVTVEEDLLAYRL-PRQEFQALLAYGPFAGHFASGLAERLRNSLERSQVASFQ 143

Query: 230 IPL--------------VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
             L              +     + +A  +++E+  G + V     +  GI+T+ D   R
Sbjct: 144 PDLAVPVSTLLRGPAVRIAPAATVGEAARVMAERGVGSLIV---DSEPPGIVTDRDFRSR 200

Query: 275 NFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +       V DV     + +  D  +  A ++L    +  L +  +  +  G++   
Sbjct: 201 VLAQGRGPETPVVDVYTAPLRTVGGDVPVYEAWRILLDSGVHHLPITRNGGEIAGVLTAT 260

Query: 334 DLLR 337
           DLL+
Sbjct: 261 DLLK 264


>gi|315101350|gb|EFT73326.1| transcriptional regulator, RpiR family [Propionibacterium acnes
           HL046PA1]
          Length = 293

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/187 (21%), Positives = 73/187 (39%), Gaps = 6/187 (3%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +S   +G   + +S  Q   +    E R + +   ++  +       A+    +I  R  
Sbjct: 88  RSSVAEGTITLDDSLTQMITKIAFHEARTIENTARAVDADELEAVASAI----SIAPRTA 143

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG + S L+  L   G        A        +  R  + + +S+SG++ E+ 
Sbjct: 144 LFGVGSSGLVASDLSEKLERIGLVCQHHQDAHMQLVHAALCKRPCVALGISFSGNTQEVV 203

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A++     +A+T    S V   AD VL           G    +S + QLA+ D 
Sbjct: 204 EALTVAQKHGSTTVAMTGLPDSPVGRLADHVLVTSARETQVRAGA--MSSRMAQLAVVDF 261

Query: 189 LAIALLE 195
           L   + +
Sbjct: 262 LFARVAQ 268


>gi|197337671|ref|YP_002157943.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
 gi|197314923|gb|ACH64372.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
          Length = 619

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 53/107 (49%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
            +      A  + +     C  +VDE ++L G+IT+ D+ +      K+++   +  +M 
Sbjct: 168 PMDTIQAVAHQMRNVVGVSCAFIVDENKRLIGMITDKDMTKRVVAQAKNVHD-PISSIMT 226

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    + ED L+  A+QL+ +HNI  + V++  ++  G +    L++
Sbjct: 227 QEIHTVYEDDLVMSAVQLMMKHNIQNIPVLNHQKQVTGFITPQHLIQ 273


>gi|123443872|ref|YP_001007843.1| transcriptional regulator [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122090833|emb|CAL13715.1| RpiR family regulatory protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 70/183 (38%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   V  I A + RV I GI  
Sbjct: 87  ALHNSISPEDSLMVMAQKLAHEKTASIMETTRKINFSVFQQVVSLINAAQ-RVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           +G     L+  L   G  +               +T  D+ IVLS++G   ++K     A
Sbjct: 146 AGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMKIAATVA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESISDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESR 197
           + R
Sbjct: 264 QQR 266


>gi|15615737|ref|NP_244041.1| hypothetical protein BH3175 [Bacillus halodurans C-125]
 gi|10175798|dbj|BAB06894.1| BH3175 [Bacillus halodurans C-125]
          Length = 435

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 45/95 (47%), Gaps = 5/95 (5%)

Query: 245 ILSEK-RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            L+EK       V+DE  K++G++   D+            +E VM KNP  + E T + 
Sbjct: 215 ELNEKTGHSRYPVIDENMKIQGMVAAKDVLNA----SRHTPIEKVMTKNPITVSERTSVA 270

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ++    I +L V+D  +K IG+V   D+L+ 
Sbjct: 271 AVAHVMVWEGIELLPVIDSHRKLIGVVSRQDVLKA 305


>gi|89101305|ref|ZP_01174115.1| hypothetical protein B14911_05661 [Bacillus sp. NRRL B-14911]
 gi|89083981|gb|EAR63172.1| hypothetical protein B14911_05661 [Bacillus sp. NRRL B-14911]
          Length = 439

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/194 (17%), Positives = 71/194 (36%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T  ++  +   A +++T   + +     LA      +     D   +A + +R   +   
Sbjct: 125 TRAHELALKAEAAVLITGGFDTDDEVKKLADDLQLPIISTSYDTFTVATMINRAIYD--- 181

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   +    V   D++        +     + +      E       VVD+  K++
Sbjct: 182 ------QLIKKEIVMVEDILTPLQETVFLYSSETVSEWHGRNRETLHSRFPVVDQNMKIQ 235

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT  DI           +++ +M K+P  +   T +  A  ++    I VL V D+  
Sbjct: 236 GMITSKDIM----GHAPESAIDKLMTKSPMTVNGKTSVASAAHMMVWEGIEVLPVADEAN 291

Query: 325 KAIGIVHFLDLLRF 338
           +  GI+   D+L+ 
Sbjct: 292 RLQGIISRQDVLKA 305


>gi|222082320|ref|YP_002541685.1| hypothetical protein Arad_8933 [Agrobacterium radiobacter K84]
 gi|221726999|gb|ACM30088.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/159 (20%), Positives = 64/159 (40%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +++ ++          A++ +   + R+ + G+G S  +    +  L   G       
Sbjct: 107 LQAMQQTIAVNNELDIGRALKALHEAR-RIHLAGVGASSLVARDFSYKLMKLGRIVLHDS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     +   +  DDL+  LS+SG+S E   I   A +    +IA+T    + +   AD
Sbjct: 166 DSHVQMANASTLGPDDLLFALSYSGASIETLRIAELASQRDATVIAVTGLQDNPLTRVAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           I L      +      +  T+   QL + D L I L++ 
Sbjct: 226 IRLYT--VGDEDRVRSSAITARDAQLMLTDLLFILLVQR 262


>gi|86157874|ref|YP_464659.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85774385|gb|ABC81222.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 153

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           +     L +A  ++     G + V  E  ++ G+IT+ D+  R+  +  D   + V D M
Sbjct: 14  IGPDATLQEAARMMRSLGIGILPVS-EHDRVLGVITDRDVVMRSTAEGGDPRVVKVRDAM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    D  L  A   + QH +  L+V+D  Q+ +G++   DL
Sbjct: 73  TPQVIHCYADAELDDAAHEMEQHAVRRLVVLDARQRLVGLLSVDDL 118



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D M    + I  D  L  A +++R   I +L V  +  + +G++   D++
Sbjct: 1   MRVKDAMTIRAETIGPDATLQEAARMMRSLGIGILPV-SEHDRVLGVITDRDVV 53


>gi|19112494|ref|NP_595702.1| IMP dehydrogenase Gua1 (predicted) [Schizosaccharomyces pombe
           972h-]
 gi|21542094|sp|O14344|IMDH_SCHPO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|2239243|emb|CAB10161.1| IMP dehydrogenase Gua1 (predicted) [Schizosaccharomyces pombe]
          Length = 524

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 25/178 (14%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVM 224
             P  S+ M     D +AI +               E    ++    K    F+    V 
Sbjct: 69  KTPFMSSPMDTVTEDQMAIYMALLGGIGVIHHNCTPEEQAAMVRKVKKYENGFILDPVVF 128

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
                         + D + I   K F  + + + G    KL GI+T  D+   FHKD N
Sbjct: 129 ---------SPQHTVGDVLKIKETKGFSGIPITENGKLRGKLVGIVTSRDV--QFHKDTN 177

Query: 282 TLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V +VM          E   L  A ++LR+     L VVD     + ++   DL++
Sbjct: 178 T-PVTEVMTPREELITTAEGISLERANEMLRKSKKGKLPVVDKDDNLVALLSLTDLMK 234


>gi|329765474|ref|ZP_08257050.1| Inosine-5-monophosphate dehydrogenase, cystathionine beta-synthase
           [Candidatus Nitrosoarchaeum limnia SFB1]
 gi|329137912|gb|EGG42172.1| Inosine-5-monophosphate dehydrogenase, cystathionine beta-synthase
           [Candidatus Nitrosoarchaeum limnia SFB1]
          Length = 298

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLS 284
               +  V     + D    +       + + D+ + L GIIT+ D+   F  +   +LS
Sbjct: 86  MSKDLVTVPSTSSIYDCAKQMITHNISSIIINDKRENLVGIITKTDLVSTFLAQSTASLS 145

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  +M K    +  +  +     +L  + IS  +VV   ++ IGI+ + D +   
Sbjct: 146 ISKIMTKKVITVSPEDSVFEVQSVLFNNKISR-VVVTKNKRPIGIITYRDFIPAK 199



 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----H 277
           ++     +   +     ++DA  IL   R G + VV  G+K  GIITE DI ++      
Sbjct: 16  ELESITKTPITISPNTSILDAKDILLRYRIGRL-VVKLGKKAIGIITEKDIAKSVSIFSG 74

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K +  + V+D M K+   +   + +    + +  HNIS +++ D  +  +GI+   DL+
Sbjct: 75  KPIEKILVKDAMSKDLVTVPSTSSIYDCAKQMITHNISSIIINDKRENLVGIITKTDLV 133



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 50/141 (35%), Gaps = 32/141 (22%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +  V     + +  ++L   +   V VV + ++  GIIT  D       DL     
Sbjct: 150 MTKKVITVSPEDSVFEVQSVLFNNKISRV-VVTKNKRPIGIITYRDFIPAKTFDLQKEFT 208

Query: 282 --------------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                                     T S +D+M K   +   D  +  A  L+ +H IS
Sbjct: 209 DPAERDEISSNQQLNEFNVNQMSYLLTFSAKDIMTKELVITYPDNDVYTAAILMIRHGIS 268

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            + V+   Q+ +GI+   D++
Sbjct: 269 GIPVI-LNQRLVGIITKSDIV 288



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 280 LNTLSVE-DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    VE + + K P  I  +T +  A  +L ++ I  L VV   +KAIGI+   D+ +
Sbjct: 10  LRDTPVELESITKTPITISPNTSILDAKDILLRYRIGRL-VVKLGKKAIGIITEKDIAK 67


>gi|260221444|emb|CBA30013.1| Inosine-5'-monophosphate dehydrogenase [Curvibacter putative
           symbiont of Hydra magnipapillata]
          Length = 355

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 59/167 (35%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +               +
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGMGIVH-KNLTPAEQAAQVAKVKRYESGLLRDPVV 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +   + +  +       V D G K+ GI+T  D+      D    +V ++M   
Sbjct: 99  ITPETTVRQVMALSDQLGVSGFPVCD-GGKVVGIVTGRDLRFETRYD---QTVREIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + + T    A  LL +H +  L+VV+D  +  G++   D+ +
Sbjct: 155 ERLITVPDGTTPEAAKALLNKHKLERLLVVNDAFELKGLITVKDITK 201


>gi|162319807|ref|YP_301708.2| hypothetical protein SSP1618 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 182

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  ++++L      +    +++I   + +V ++G G+SG + +  A  L   G  +  V 
Sbjct: 11  LDEIDNTLSHVKDSEAETFLKQIIKAE-QVFVSGKGRSGFVANSFAMRLNQLGKGAHVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         IT  DL ++LS SGS++ L+ +   A+     ++ +++   S +   A+
Sbjct: 70  ESTTP-----SITEKDLFVILSGSGSTEHLRLLADKAKAVGAEVVLLSTNPTSKIGELAN 124

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G A P  S   Q      D++ + L+   N  E      H
Sbjct: 125 AVIELPAGTKYDTEGSAQPLGSLFEQASQVFLDSIVLDLMTEINVDEETMQQNH 178


>gi|15900649|ref|NP_345253.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae TIGR4]
 gi|111658354|ref|ZP_01409042.1| hypothetical protein SpneT_02000494 [Streptococcus pneumoniae
           TIGR4]
 gi|14972229|gb|AAK74893.1| putative acetoin utilization protein AcuB [Streptococcus pneumoniae
           TIGR4]
          Length = 218

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDITVSHAADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ IS+L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKISILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  D  ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDITVSHAADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55


>gi|298675660|ref|YP_003727410.1| putative signal transduction protein [Methanohalobium evestigatum
           Z-7303]
 gi|298288648|gb|ADI74614.1| putative signal transduction protein with CBS domains
           [Methanohalobium evestigatum Z-7303]
          Length = 291

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 46/123 (37%), Gaps = 2/123 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                      +      +V +   L +A  I  +       V D+   + G++T  DI 
Sbjct: 165 MVSIPKIPVKNYVTKDSVMVNVNATLQEAARIFVKNNIHGSPVEDKSS-IVGVVTFTDIG 223

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                   +L V D+M K    +  DT L  A+++  +HNI  L VV       G V   
Sbjct: 224 DAIASGKMSLKVRDIMTKELITVDGDTPLNEAVKIFNKHNIGGL-VVTINGVPEGFVSKT 282

Query: 334 DLL 336
           D+L
Sbjct: 283 DVL 285


>gi|296876307|ref|ZP_06900359.1| CBS domain protein [Streptococcus parasanguinis ATCC 15912]
 gi|296432597|gb|EFH18392.1| CBS domain protein [Streptococcus parasanguinis ATCC 15912]
          Length = 268

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKD 279
            DV     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + +
Sbjct: 131 KDVADIMTSPVLVTHDSYIQDAIITLFMYDADVLYVIDEDKLLLGIMSRKDLLRASLNSN 190

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVH 331
           +++  V   M + P      +D  +  A  LL+ H+I  L VV++   +K +G V 
Sbjct: 191 IDSTPVAVCMTRMPHIITCNKDMNILEAAVLLQDHSIDSLPVVEEKNDRKIVGSVT 246



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V D+M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 119 DLETLFFFDTFQKDVADIMT-SPVLVTHDSYIQDAIITLFMYDADVLYVIDEDKLLLGIM 177

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 178 SRKDLLRA 185


>gi|294494707|ref|YP_003541200.1| hypothetical protein Mmah_0017 [Methanohalophilus mahii DSM 5219]
 gi|292665706|gb|ADE35555.1| CBS domain containing membrane protein [Methanohalophilus mahii DSM
           5219]
          Length = 250

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 2/114 (1%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLNTLSV 285
           +S+P +     +  A ++L E +     VV     Q L GI++  D+         +  V
Sbjct: 64  NSVPQITPETDIYKAASLLLEAKLERCPVVKSSIEQNLVGIVSNTDLLGKMVNRDLSKPV 123

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            ++M   P        +      + +++ + L VV    K +G++   DL++ G
Sbjct: 124 REIMTSPPTTCKPTDNIGEIWSAMLENDYTGLPVVSKKGKLMGMITRRDLIKSG 177



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 51/137 (37%), Gaps = 10/137 (7%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           GK+    +               K    + +  + + E  +  + VV +  KL G+IT  
Sbjct: 112 GKMVNRDLSKPVREIMTSPPTTCKPTDNIGEIWSAMLENDYTGLPVVSKKGKLMGMITRR 171

Query: 271 DI---------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           D+          R      +   VE VM      I +DT +    + +  +++  L V D
Sbjct: 172 DLIKSGFARIGVREKDGSTHNQPVEKVMSTPAYSIKQDTSVKECTEKVLHYDVGRLTV-D 230

Query: 322 DCQKAIGIVHFLDLLRF 338
              K +GIV   DLLR 
Sbjct: 231 VEDKPVGIVDRSDLLRA 247



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 42/105 (40%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +  A  ++ +     + VV++  K+ G+IT+ DI +      N      V   + 
Sbjct: 9   HESDTVTHARQLMRDHFLRGIPVVNDNGKVSGMITDKDILKVASTKSNVTVAGFV--NSV 66

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLL 336
             I  +T +  A  LL +  +    VV     Q  +GIV   DLL
Sbjct: 67  PQITPETDIYKAASLLLEAKLERCPVVKSSIEQNLVGIVSNTDLL 111



 Score = 44.9 bits (105), Expect = 0.020,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 26/49 (53%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +   + E   +T A QL+R H +  + VV+D  K  G++   D+L+
Sbjct: 1   MSGDAVYLHESDTVTHARQLMRDHFLRGIPVVNDNGKVSGMITDKDILK 49


>gi|164687916|ref|ZP_02211944.1| hypothetical protein CLOBAR_01561 [Clostridium bartlettii DSM
           16795]
 gi|164602329|gb|EDQ95794.1| hypothetical protein CLOBAR_01561 [Clostridium bartlettii DSM
           16795]
          Length = 378

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 3/102 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               +I A+ I+   +   + V D+   L GI+T  ++ +N  +D     +  VM ++P 
Sbjct: 264 ETRTVIQAMEIMRTNKVDSILVTDKNNLLVGILTVKELRQNGIQDYY---IYKVMNQDPL 320

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            I ED  L   + ++   N+  + VV    + +G++    LL
Sbjct: 321 FIYEDCNLIEILNIMNNKNVGHIPVVSRDGQLVGLITRSSLL 362



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 32/57 (56%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +D+MIK+P   +E   +  AM+++R + +  ++V D     +GI+   +L + GI
Sbjct: 250 KAKDIMIKDPVKAIETRTVIQAMEIMRTNKVDSILVTDKNNLLVGILTVKELRQNGI 306



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 24/61 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +   C LI+ + I++ K  G + VV    +L G+IT   +     +    + V
Sbjct: 315 MNQDPLFIYEDCNLIEILNIMNNKNVGHIPVVSRDGQLVGLITRSSLLSVLSEQFLEMEV 374

Query: 286 E 286
            
Sbjct: 375 S 375


>gi|238789202|ref|ZP_04632990.1| RpiR family regulatory protein [Yersinia frederiksenii ATCC 33641]
 gi|238722734|gb|EEQ14386.1| RpiR family regulatory protein [Yersinia frederiksenii ATCC 33641]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   V  I   + RV I GI  
Sbjct: 87  ALHNAISSEDSLMVMAQKLAHEKTASIMETTRKINFSVFQHIVSLINTAQ-RVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IVLS++G   +++     A
Sbjct: 146 SGLTAKDLSYKLQKIGIVTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMRIAATMA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESISDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESR 197
           + R
Sbjct: 264 QLR 266


>gi|328543257|ref|YP_004303366.1| Inosine-5prime-monophosphate dehydrogenase protein [polymorphum
           gilvum SL003B-26A1]
 gi|326413003|gb|ADZ70066.1| Inosine-5prime-monophosphate dehydrogenase protein [Polymorphum
           gilvum SL003B-26A1]
          Length = 143

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
           H G  +   +    L +   +L+EK  G + V D+   ++GI++E DI R   +    + 
Sbjct: 9   HKGRDVVTARSSATLGEICKMLAEKGIGAIVVTDDKGHIEGIVSERDIVRMIGRSGAGIL 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L V D M +      E+  +   M  +       + VV    K  G++   D+++
Sbjct: 69  DLPVGDGMTRAVVTCREEDSINAVMARMSSGRFRHIPVV-AEGKLAGLISIGDVVK 123


>gi|284173825|ref|ZP_06387794.1| hypothetical protein Ssol98_04100 [Sulfolobus solfataricus 98/2]
 gi|261602654|gb|ACX92257.1| putative signal transduction protein with CBS domains [Sulfolobus
           solfataricus 98/2]
          Length = 124

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMI 290
            V+    L +   ++ E+  G V VV E    KGI T+ D  +     L++   V     
Sbjct: 15  QVEANTSLQEVCKLMLERGVGSV-VVTEQGIPKGIFTDRDAVKAIATSLSSSDEVRLAAT 73

Query: 291 K-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             N  ++ ED  +  A++++  + I  L V +     IG+    D+ +
Sbjct: 74  MGNLIIVDEDIDVFEALKIMAANKIRHLPVKNKDGNIIGMFSITDVYK 121


>gi|154684831|ref|YP_001419992.1| HxlB [Bacillus amyloliquefaciens FZB42]
 gi|42820790|emb|CAE02626.1| HxlB protein [Bacillus amyloliquefaciens FZB42]
 gi|154350682|gb|ABS72761.1| HxlB [Bacillus amyloliquefaciens FZB42]
          Length = 185

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 73/187 (39%), Gaps = 18/187 (9%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L  I+ E    ++L S        +     ++I +   ++  +G G+SG +    A  + 
Sbjct: 7   LHEILNEISRTAALIS------DSEADKLADQILSAD-QIFTSGAGRSGFMAKAFAMRMM 59

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  ++ V            +    L+I+ S SG +  L      A+  +  + A+T  
Sbjct: 60  HIGLNAYIVGETLTPP-----LQEGGLVIIGSGSGETKSLLHTAEKAKSLNGIITALTIN 114

Query: 148 NKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSE 201
             S +   AD+ +T+P  P+    G    + P  S   Q      DA+ + ++E +  + 
Sbjct: 115 PDSSLGKLADLTITIPGSPKEETGGDRKTIQPMGSLFEQTLLLFYDAVILKIMEKKELNS 174

Query: 202 NDFYVLH 208
            D +  H
Sbjct: 175 ADMFTKH 181


>gi|325267191|ref|ZP_08133858.1| inosine-5'-monophosphate dehydrogenase [Kingella denitrificans ATCC
           33394]
 gi|324981354|gb|EGC16999.1| inosine-5'-monophosphate dehydrogenase [Kingella denitrificans ATCC
           33394]
          Length = 488

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 65/173 (37%), Gaps = 17/173 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAI++ +          ++H         +    V         
Sbjct: 40  NLPLLSAAMDTVTEARLAISMAQEGGIG-----IIHKNMTPEQQALAVRKVKRHESGIVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               V     + + +   S+++     + VV +  K+ GI+T  D+   F   L  L V 
Sbjct: 95  DPVTVSPDKLIGELLAERSQRKRKMSGLPVV-QDGKVVGIVTNRDLR--FETRL-DLPVS 150

Query: 287 DVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M        +   T +  A +++ +H I  ++V+++  +  G++   D+++
Sbjct: 151 AIMTPREKLISVPVGTGIEEAREVMHKHKIERVLVLNEKDELKGLITVKDIIK 203



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 31/56 (55%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            S +M   + +  V +G  + +A  ++ + +   V V++E  +LKG+IT  DI +N
Sbjct: 149 VSAIMTPREKLISVPVGTGIEEAREVMHKHKIERVLVLNEKDELKGLITVKDIIKN 204


>gi|238918816|ref|YP_002932330.1| transcriptional regulator, RpiR family protein [Edwardsiella
           ictaluri 93-146]
 gi|238868384|gb|ACR68095.1| transcriptional regulator, RpiR family protein [Edwardsiella
           ictaluri 93-146]
          Length = 225

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           H ++++  ++     ++AEK  +++L+S+L      Q   A+  +   + R+VITG+G S
Sbjct: 106 HGILRHDPLKVVGEKLMAEK--IAALQSTLTINHEEQLQRALRMLLGAR-RIVITGLGAS 162

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           G +    A+ L   G  ++              +   DL++ +S+SG   E+ 
Sbjct: 163 GLVARDFANKLMQIGLAAYAESDTHMQIACAQAMQPQDLLMAISYSGERKEVN 215


>gi|282912550|ref|ZP_06320346.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282324246|gb|EFB54562.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312436569|gb|ADQ75640.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 266

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL      +S  +      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLT--TDQSRNNDHQFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|162456297|ref|YP_001618664.1| CBS domain-containing protein [Sorangium cellulosum 'So ce 56']
 gi|161166879|emb|CAN98184.1| predicted CBS domain [Sorangium cellulosum 'So ce 56']
          Length = 306

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 5/120 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
           +    + ++       DA+  + +   G V V D GQ+L GI+T+ DI         D  
Sbjct: 6   YRRPRMIVLSPRSTAYDAVRAMMDNHVGAVLVHD-GQRLAGIVTDRDIALEIVAGDLDAR 64

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +  + D+M      +  D  +  A++ +R H    + V  +  + +G+V   DLL  G+I
Sbjct: 65  STMLRDIMSDEIATLELDASIDDAVRTMRDHACRRVPVT-EQGRPVGLVTLDDLLADGVI 123


>gi|15924695|ref|NP_372229.1| thioesterase family protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15927282|ref|NP_374815.1| hypothetical protein SA1527 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283377|ref|NP_646465.1| hypothetical protein MW1648 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49486530|ref|YP_043751.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57652003|ref|YP_186588.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82751292|ref|YP_417033.1| DNA-binding protein [Staphylococcus aureus RF122]
 gi|87160983|ref|YP_494345.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88195513|ref|YP_500318.1| hypothetical protein SAOUHSC_01813 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268184|ref|YP_001247127.1| DRTGG domain-containing protein [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394251|ref|YP_001316926.1| DRTGG domain-containing protein [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151221811|ref|YP_001332633.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156980022|ref|YP_001442281.1| hypothetical protein SAHV_1691 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161509918|ref|YP_001575577.1| hypothetical protein USA300HOU_1691 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|221142340|ref|ZP_03566833.1| hypothetical protein SauraJ_12007 [Staphylococcus aureus subsp.
           aureus str. JKD6009]
 gi|253315120|ref|ZP_04838333.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           str. CF-Marseille]
 gi|253732355|ref|ZP_04866520.1| CBS domain transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253734512|ref|ZP_04868677.1| CBS domain transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255006490|ref|ZP_05145091.2| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|257794089|ref|ZP_05643068.1| CBS domain-containing protein [Staphylococcus aureus A9781]
 gi|258415793|ref|ZP_05682064.1| CBS domain-containing protein [Staphylococcus aureus A9763]
 gi|258421970|ref|ZP_05684890.1| DRTGG domain-containing protein [Staphylococcus aureus A9719]
 gi|258424120|ref|ZP_05687002.1| CBS domain-containing protein [Staphylococcus aureus A9635]
 gi|258438272|ref|ZP_05689556.1| CBS domain-containing protein [Staphylococcus aureus A9299]
 gi|258443730|ref|ZP_05692069.1| DRTGG domain-containing protein [Staphylococcus aureus A8115]
 gi|258445941|ref|ZP_05694117.1| CBS domain-containing protein [Staphylococcus aureus A6300]
 gi|258448379|ref|ZP_05696496.1| thioesterase [Staphylococcus aureus A6224]
 gi|258450900|ref|ZP_05698953.1| DRTGG domain-containing protein [Staphylococcus aureus A5948]
 gi|258454141|ref|ZP_05702112.1| DRTGG domain-containing protein [Staphylococcus aureus A5937]
 gi|262049020|ref|ZP_06021898.1| hypothetical protein SAD30_2225 [Staphylococcus aureus D30]
 gi|262051795|ref|ZP_06024012.1| hypothetical protein SA930_0457 [Staphylococcus aureus 930918-3]
 gi|269203342|ref|YP_003282611.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893199|ref|ZP_06301433.1| DNA-binding protein [Staphylococcus aureus A8117]
 gi|282916964|ref|ZP_06324722.1| DNA-binding protein [Staphylococcus aureus subsp. aureus D139]
 gi|282924395|ref|ZP_06332068.1| DNA-binding protein [Staphylococcus aureus A9765]
 gi|282927834|ref|ZP_06335445.1| DNA-binding protein [Staphylococcus aureus A10102]
 gi|283770782|ref|ZP_06343674.1| thioesterase [Staphylococcus aureus subsp. aureus H19]
 gi|284024752|ref|ZP_06379150.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           132]
 gi|294849865|ref|ZP_06790604.1| DNA-binding protein [Staphylococcus aureus A9754]
 gi|295406014|ref|ZP_06815822.1| DNA-binding protein [Staphylococcus aureus A8819]
 gi|296276456|ref|ZP_06858963.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           MR1]
 gi|297207583|ref|ZP_06924018.1| CBS domain protein [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297245060|ref|ZP_06928937.1| DNA-binding protein [Staphylococcus aureus A8796]
 gi|300911664|ref|ZP_07129108.1| CBS domain protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|304380703|ref|ZP_07363374.1| CBS domain protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|13701500|dbj|BAB42794.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14247477|dbj|BAB57867.1| similar to CBS domain protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|21204817|dbj|BAB95513.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49244973|emb|CAG43434.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|57286189|gb|AAW38283.1| CBS domain protein [Staphylococcus aureus subsp. aureus COL]
 gi|82656823|emb|CAI81252.1| probable DNA-binding protein [Staphylococcus aureus RF122]
 gi|87126957|gb|ABD21471.1| CBS domain protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87203071|gb|ABD30881.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741253|gb|ABQ49551.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus JH9]
 gi|149946703|gb|ABR52639.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus JH1]
 gi|150374611|dbj|BAF67871.1| CBS domain DNA-binding protein [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|156722157|dbj|BAF78574.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160368727|gb|ABX29698.1| hypothetical protein USA300HOU_1691 [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253723877|gb|EES92606.1| CBS domain transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253727566|gb|EES96295.1| CBS domain transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|257788061|gb|EEV26401.1| CBS domain-containing protein [Staphylococcus aureus A9781]
 gi|257839386|gb|EEV63859.1| CBS domain-containing protein [Staphylococcus aureus A9763]
 gi|257842014|gb|EEV66443.1| DRTGG domain-containing protein [Staphylococcus aureus A9719]
 gi|257845741|gb|EEV69773.1| CBS domain-containing protein [Staphylococcus aureus A9635]
 gi|257848316|gb|EEV72307.1| CBS domain-containing protein [Staphylococcus aureus A9299]
 gi|257851136|gb|EEV75079.1| DRTGG domain-containing protein [Staphylococcus aureus A8115]
 gi|257855183|gb|EEV78122.1| CBS domain-containing protein [Staphylococcus aureus A6300]
 gi|257858347|gb|EEV81232.1| thioesterase [Staphylococcus aureus A6224]
 gi|257861436|gb|EEV84244.1| DRTGG domain-containing protein [Staphylococcus aureus A5948]
 gi|257863593|gb|EEV86350.1| DRTGG domain-containing protein [Staphylococcus aureus A5937]
 gi|259160289|gb|EEW45316.1| hypothetical protein SA930_0457 [Staphylococcus aureus 930918-3]
 gi|259162837|gb|EEW47401.1| hypothetical protein SAD30_2225 [Staphylococcus aureus D30]
 gi|262075632|gb|ACY11605.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269941184|emb|CBI49572.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
           TW20]
 gi|282319451|gb|EFB49803.1| DNA-binding protein [Staphylococcus aureus subsp. aureus D139]
 gi|282590344|gb|EFB95423.1| DNA-binding protein [Staphylococcus aureus A10102]
 gi|282592896|gb|EFB97899.1| DNA-binding protein [Staphylococcus aureus A9765]
 gi|282764517|gb|EFC04643.1| DNA-binding protein [Staphylococcus aureus A8117]
 gi|283460929|gb|EFC08019.1| thioesterase [Staphylococcus aureus subsp. aureus H19]
 gi|285817387|gb|ADC37874.1| Cytosolic protein containing multiple CBS domains [Staphylococcus
           aureus 04-02981]
 gi|294823204|gb|EFG39634.1| DNA-binding protein [Staphylococcus aureus A9754]
 gi|294969011|gb|EFG45032.1| DNA-binding protein [Staphylococcus aureus A8819]
 gi|296887600|gb|EFH26498.1| CBS domain protein [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178140|gb|EFH37388.1| DNA-binding protein [Staphylococcus aureus A8796]
 gi|298694974|gb|ADI98196.1| probable DNA-binding protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|300887085|gb|EFK82286.1| CBS domain protein [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333369|gb|ADL23562.1| transcriptional regulatory protein [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302751531|gb|ADL65708.1| transcriptional regulatory protein [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304340810|gb|EFM06739.1| CBS domain protein [Staphylococcus aureus subsp. aureus ATCC
           BAA-39]
 gi|312830083|emb|CBX34925.1| CBS domain pair family protein [Staphylococcus aureus subsp. aureus
           ECT-R 2]
 gi|315130660|gb|EFT86646.1| hypothetical protein CGSSa03_10465 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315197171|gb|EFU27510.1| hypothetical protein CGSSa01_00761 [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320143801|gb|EFW35574.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323440751|gb|EGA98460.1| DNA-binding protein [Staphylococcus aureus O11]
 gi|323442991|gb|EGB00613.1| DNA-binding protein [Staphylococcus aureus O46]
 gi|329314378|gb|AEB88791.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus T0131]
 gi|329726995|gb|EGG63452.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus 21189]
 gi|329727058|gb|EGG63514.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus 21172]
 gi|329733078|gb|EGG69415.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus 21193]
          Length = 432

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 82/216 (37%), Gaps = 20/216 (9%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           ELK IL Y        + I    +      +     I++T   +P +     A      +
Sbjct: 104 ELKDILKYI---GPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFANEHDLPV 160

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             +  D   +A + ++        + +   K+    +   D+M   D + ++     + D
Sbjct: 161 LSSSYDTFLVANIINK-------ALFNQ--KIRKDILIVQDIMTPLDDLSVLFDTMKIAD 211

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
              + +        VV+E  KL GI+T     R      +   ++ VM +NP  +   + 
Sbjct: 212 YKRMANRTGHTRFPVVNESYKLVGIVT----SREMINTKDDDEIDKVMTRNPIYVNAMST 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     ++    I ++ VV   +K +G+++  D+L+
Sbjct: 268 VASCAHMMIWEGIELIPVVSSNKKTVGVINRQDVLK 303


>gi|304317757|ref|YP_003852902.1| RpiR family transcriptional regulator [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302779259|gb|ADL69818.1| transcriptional regulator, RpiR family [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 280

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 56/167 (33%), Gaps = 3/167 (1%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           +   K  + S+E ++      +   A   I     ++ I G+G S  +   +        
Sbjct: 97  VKISKNNMQSIEKTMDMLDRNEMEKAANAILNA-NKIDIYGVGASAIVAQDMLQKFMRIN 155

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
                   +         I+  D+ I +S+SG + +    L  A+      I IT    S
Sbjct: 156 KSCTAYSDSHMQLASAANISDGDVAIGISYSGQTADTVDALRIAKNSGATTICITRFGNS 215

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +   +DI L +         G     S I QL + D L   +   +
Sbjct: 216 PITEVSDIKLFVYSTEAIFRSGA--MASRIAQLNVIDILFSIIACRK 260


>gi|297543757|ref|YP_003676059.1| RpiR family transcriptional regulator [Thermoanaerobacter mathranii
           subsp. mathranii str. A3]
 gi|296841532|gb|ADH60048.1| transcriptional regulator, RpiR family [Thermoanaerobacter
           mathranii subsp. mathranii str. A3]
          Length = 282

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEK 59
           +    S  K   +    +  +  V   ++ I    K+ + +  S L  +       AV+ 
Sbjct: 69  IKIAVSLSKQTKKLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVK---SIIKAVDA 125

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+  SG +        A    P                + + D+   +S
Sbjct: 126 LSNA-NKIDFYGVAASGTVAYDAMLKFARINIPCTAYQDTHLQLTSAANLKKGDVAFGIS 184

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SG + E+   L  A+      I++T   +  +   ADI L +  E      G   T S 
Sbjct: 185 YSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA--TASR 242

Query: 180 IMQLAIGDALAIALLESR 197
           I QL + D L I + + +
Sbjct: 243 IAQLTVIDILFILVAKRK 260


>gi|149914738|ref|ZP_01903268.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
 gi|149811531|gb|EDM71366.1| Protein containing a CBS domain [Roseobacter sp. AzwK-3b]
          Length = 144

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           V  G  + +A  IL+E+R G + V  +G    GI++E DI R          + +V+ +M
Sbjct: 18  VTPGTLVSEAAQILAERRIGGLVVSKKGDTADGILSERDIVRALAVKGAVCLSETVDGMM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +NP   +        +  + +     + VV D  K +GIV   D+++  +
Sbjct: 78  TRNPVCCVLQDSSDSVLARMTEGRFRHMPVVTD-GKLVGIVTIGDVVKARL 127



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   TL++ A Q+L +  I  L+V      A GI+   D++R 
Sbjct: 16  ITVTPGTLVSEAAQILAERRIGGLVVSKKGDTADGILSERDIVRA 60


>gi|323141507|ref|ZP_08076395.1| CBS domain protein [Phascolarctobacterium sp. YIT 12067]
 gi|322414023|gb|EFY04854.1| CBS domain protein [Phascolarctobacterium sp. YIT 12067]
          Length = 219

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/124 (25%), Positives = 57/124 (45%), Gaps = 12/124 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
             + +  ++    +++A  I+  KR   + VVD+ Q+++GIIT  DI +    D      
Sbjct: 7   MTEPVVTIREDQSILEAREIMRGKRLISLPVVDDMQRVRGIITSDDIGKASPSDSSTLSR 66

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  L V+DVM ++   +  D  +      L ++ ++ L VV+   K  GIV   
Sbjct: 67  YEANYLLGRLKVKDVMKRSVISVEADDTIEYVAYKLYKYKVNALPVVNQENKLCGIVSRS 126

Query: 334 DLLR 337
           D+ R
Sbjct: 127 DIFR 130



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M +    I ED  +  A +++R   +  L VVDD Q+  GI+   D+ + 
Sbjct: 3   VKDIMTEPVVTIREDQSILEAREIMRGKRLISLPVVDDMQRVRGIITSDDIGKA 56



 Score = 39.1 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 17/98 (17%), Positives = 40/98 (40%), Gaps = 13/98 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    +      L + +   + VV++  KL GI++  DIFR+  + +        M +N
Sbjct: 89  VEADDTIEYVAYKLYKYKVNALPVVNQENKLCGIVSRSDIFRSIVEIMG-------MNRN 141

Query: 293 PKVILEDTL-----LTVAMQLLRQHNISVL-MVVDDCQ 324
              I  +       +     ++++  I+++ +V     
Sbjct: 142 CLRITIEAPDKVGVVAEISNIMKEDGINIISLVTKQNG 179


>gi|228469769|ref|ZP_04054727.1| inosine-5'-monophosphate dehydrogenase [Porphyromonas uenonis 60-3]
 gi|228308608|gb|EEK17359.1| inosine-5'-monophosphate dehydrogenase [Porphyromonas uenonis 60-3]
          Length = 500

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 16/185 (8%)

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           ++ +A ++      P + ES  +   P  SAIMQ    D +AIAL  +RN   +  +   
Sbjct: 34  RTPLAKYS------PAKEESRINLNIPFVSAIMQSVSNDTMAIAL--ARNGGLSFIFGSQ 85

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
           P  +   +                 V     L D + I        + V D+      L 
Sbjct: 86  PIEEEAEMVARVKKFKAGFVRSDANVSPKDTLADVLAITQNTGHSTIGVTDDGTPDGVLC 145

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D       D     V D M          +   L+ A  ++  H ++ L ++D+
Sbjct: 146 GIVTSRDYR--LSTDSMDRKVADFMTPFERLTTGRKGISLSEANDIIWSHKLNALPIIDE 203

Query: 323 CQKAI 327
            ++  
Sbjct: 204 DRRLC 208


>gi|138895153|ref|YP_001125606.1| sugar phosphate aminotransferase [Geobacillus thermodenitrificans
           NG80-2]
 gi|134266666|gb|ABO66861.1| Predicted sugar phosphate aminotransferaseinvolved in capsule
           formation [Geobacillus thermodenitrificans NG80-2]
          Length = 183

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/185 (19%), Positives = 62/185 (33%), Gaps = 16/185 (8%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           +  I +E   + +       E        V    A   R+ + G G+SG +G   A  L 
Sbjct: 5   IEVIFSEIEQVFA-------EFDHMSIECVAMRLAKAKRIFVAGEGRSGFMGKAFAMRLM 57

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + V            +   D +I +S SG + +   I   A++    +IA+T++
Sbjct: 58  HLGATVYAVGETVTP-----SLQSGDTLIAISGSGVTKQTVWIAEKAKQLGCEVIAVTTD 112

Query: 148 NKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQLAIGDALAIALLESRNFSEND 203
             S +A  A + + +P   +           P  S   Q       AI L  + N     
Sbjct: 113 LSSALANIASLTVHIPAATKYRRGHETQSKQPLGSLFDQCTHLILDAICLQYANNQQVEH 172

Query: 204 FYVLH 208
                
Sbjct: 173 QKAFQ 177


>gi|308273602|emb|CBX30204.1| hypothetical protein N47_D30130 [uncultured Desulfobacterium sp.]
          Length = 426

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 2/122 (1%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G               +  V+    +     IL  K    + VV +G++L G+I+  D 
Sbjct: 296 GGNQQASVQISDLMSFPVFTVEPDTSMEKVAAILKGKGCTGLPVV-QGEQLVGVISRRDF 354

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +   +      V+  M  +   I        A +L+ +H+I  L VV +  + IGI+  
Sbjct: 355 IKIKKESQLKSPVKAYMSTDITTIDPGKSPVQAAKLMAKHDIGRLPVV-ENGRMIGIITR 413

Query: 333 LD 334
            D
Sbjct: 414 SD 415



 Score = 42.6 bits (99), Expect = 0.095,   Method: Composition-based stats.
 Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           ++ + D+M      +  DT +     +L+    + L VV   ++ +G++   D ++  
Sbjct: 302 SVQISDLMSFPVFTVEPDTSMEKVAAILKGKGCTGLPVV-QGEQLVGVISRRDFIKIK 358


>gi|254519504|ref|ZP_05131560.1| helix-turn-helix protein RpiR:Sugar isomerase [Clostridium sp.
           7_2_43FAA]
 gi|226913253|gb|EEH98454.1| helix-turn-helix protein RpiR:Sugar isomerase [Clostridium sp.
           7_2_43FAA]
          Length = 266

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 3/141 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           S Q   A+E I++   R+   G+G SG    +  S     G     +  +        + 
Sbjct: 101 SNQLRMAIEFIQSS-NRLFFYGVGASGLAAYEAQSRFIRMGKTGLSITDSHFQLMYSSVC 159

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
             +D+II LS SG + ++   L  A++    +IAIT+   S VA  AD VL    +    
Sbjct: 160 DENDVIIALSLSGYTKDIIESLKVAKKQKAKIIAITNYALSPVAQIADCVLLTAGKENLL 219

Query: 170 PHGLAPTTSAIMQLAIGDALA 190
             G     S I QL I D L 
Sbjct: 220 DGGSL--ISKISQLYIIDLLC 238


>gi|73669658|ref|YP_305673.1| hypothetical protein Mbar_A2165 [Methanosarcina barkeri str.
           Fusaro]
 gi|72396820|gb|AAZ71093.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 291

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 45/123 (36%), Gaps = 2/123 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                      +      LV +   + +A  +          V D+  K+ GI+T  DI 
Sbjct: 165 MISLPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPV-DDKGKIIGIVTYTDIA 223

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +    + V+D+M K    +  D  L   ++L  ++N+  L+V        G +   
Sbjct: 224 HAIAQGKPNVKVKDIMTKELITVDGDMQLYDVVKLFHKYNVGRLIVT-INGVPKGTLSKT 282

Query: 334 DLL 336
           D+L
Sbjct: 283 DVL 285



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+  M   P ++  +  +  A +L  ++N+    V DD  K IGIV + D+   
Sbjct: 168 LPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPV-DDKGKIIGIVTYTDIAHA 225


>gi|114330974|ref|YP_747196.1| signal-transduction protein [Nitrosomonas eutropha C91]
 gi|114307988|gb|ABI59231.1| putative signal-transduction protein with CBS domains [Nitrosomonas
           eutropha C91]
          Length = 149

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNFHK---D 279
               +  ++    +++A  ++ +   G + V+D+        G+IT+ D+         D
Sbjct: 7   CNREVRTIQRDGSVLEAARMMRQYHVGALIVIDKVNDRVIPVGVITDRDLVVEVLATGLD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              ++V+DVM +    + E+T +  A+  +R+  I  L +++D  + +GI+   D++  
Sbjct: 67  KEAITVDDVMTQELFAVKENTAIHDAINFMRRKTIRRLPIINDNGELVGILTTDDIMEI 125



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLL 336
           ++V ++  +  + I  D  +  A +++RQ+++  L+V+D        +G++   DL+
Sbjct: 1   MTVSEICNREVRTIQRDGSVLEAARMMRQYHVGALIVIDKVNDRVIPVGVITDRDLV 57



 Score = 42.6 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           VK    + DAI  +  K    + ++++  +L GI+T  DI     +++  L
Sbjct: 83  VKENTAIHDAINFMRRKTIRRLPIINDNGELVGILTTDDIMEILSEEVLDL 133


>gi|295400867|ref|ZP_06810843.1| transcriptional regulator, RpiR family [Geobacillus
           thermoglucosidasius C56-YS93]
 gi|294977130|gb|EFG52732.1| transcriptional regulator, RpiR family [Geobacillus
           thermoglucosidasius C56-YS93]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/180 (18%), Positives = 67/180 (37%), Gaps = 7/180 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K++      +     K  + +  +++      +   A E +   + +++  G+G S    
Sbjct: 94  KDTPYDLFNKVTYVNKAAVEATTTTIDKR---ELEKAAEAMVKAR-KILFYGVGGSAASA 149

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                     G  S            +  +   D+ + +S SG + ++  I  +A++ + 
Sbjct: 150 MDACYKFTKLGYVSVMSPDFHTMLPLVANLEEGDVFVAISTSGRTKDVLEIARFAKKHAA 209

Query: 140 PLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            +IAIT  +  S +   ADI L LP   +    G     S + QL I DAL +       
Sbjct: 210 TVIAITKLDTSSPLYKEADIKLCLPDVEQDHRIG--SMASRMTQLNIIDALYLITFHRMG 267


>gi|89100475|ref|ZP_01173337.1| YqzB [Bacillus sp. NRRL B-14911]
 gi|89084818|gb|EAR63957.1| YqzB [Bacillus sp. NRRL B-14911]
          Length = 210

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/197 (20%), Positives = 73/197 (37%), Gaps = 10/197 (5%)

Query: 152 VACHADIVLTLPKEPE-SCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND--FYVLH 208
           +    +++L + KE        +A   +        D   + +    +       FY   
Sbjct: 6   LNKRQELILDIVKENGPITGEHIAERLNLTRATLRPDLAILTMAGYLDARPRVGYFYTGK 65

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G +L T  +    V        +V     + DAI  +  +  G + VVD+   L G+++
Sbjct: 66  TGAQLLTESLQKLLVKDYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVVDQSSLLVGVLS 125

Query: 269 EGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
             D+ R    +++L  L V  +M + P      +D LL     LL +  I  L VV +  
Sbjct: 126 RKDLLRASIGNQELTALPVNIIMTRMPNITTCKKDDLLIEIANLLIEKQIDALPVVKETD 185

Query: 325 K---AIGIVHFLDLLRF 338
           K     G +   +L R 
Sbjct: 186 KGFEVTGRITKTNLTRA 202



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L  L V+D     P V+ E+  +  A+  +   ++  L VVD     +G++   DL
Sbjct: 71  LTESLQKLLVKDYQSI-PVVVNENVSVYDAIVTMFLEDVGTLFVVDQSSLLVGVLSRKDL 129

Query: 336 LRFGI 340
           LR  I
Sbjct: 130 LRASI 134


>gi|254380661|ref|ZP_04996027.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194339572|gb|EDX20538.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 216

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 47/130 (36%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------FRNF 276
               +  V       + +T +   +   + VV+   ++ G+++E D+             
Sbjct: 1   MTHKVVAVTPTAEFKEIVTAIERWKVTALPVVEGEGRVVGVVSEADLLPKEEFHEHRPGM 60

Query: 277 HKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            + +  L+          ED+M      +     L    +L+ + +I  L VVD      
Sbjct: 61  IEHMRRLADTSKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKRLPVVDADGTLK 120

Query: 328 GIVHFLDLLR 337
           GIV   DLL+
Sbjct: 121 GIVSRADLLK 130



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 17/93 (18%), Positives = 33/93 (35%), Gaps = 7/93 (7%)

Query: 201 ENDFYVLHPGG-------KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           + +F+   PG           +                 V     L     +++E+    
Sbjct: 50  KEEFHEHRPGMIEHMRRLADTSKAGSTCAEDLMTTPAVTVHPSATLPQVARLMAERHIKR 109

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           + VVD    LKGI++  D+ + F +  + L+ E
Sbjct: 110 LPVVDADGTLKGIVSRADLLKVFLRSDDALAAE 142


>gi|167462810|ref|ZP_02327899.1| Inosine-5'-monophosphate dehydrogenase related protein
           [Paenibacillus larvae subsp. larvae BRL-230010]
          Length = 138

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +  V +   + +    + +   G + VV EG KL G++T+ D+       K   + 
Sbjct: 8   MSTDMVTVGLEDNVYEIAVKMKKHDIGFIPVV-EGNKLIGVVTDRDLVLRGYAEKRSGSA 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V++VM     VI        A Q++ +  +  L V  +  + IG+V   DL
Sbjct: 67  AVKEVMSDEVTVIPPSMSFDEAAQIMAKSQVRRLPVA-ENGELIGVVSLGDL 117



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V+++M  +   +  +  +      +++H+I  + VV +  K IG+V   DL+
Sbjct: 3   TVKEIMSTDMVTVGLEDNVYEIAVKMKKHDIGFIPVV-EGNKLIGVVTDRDLV 54


>gi|86138810|ref|ZP_01057382.1| CBS domain protein [Roseobacter sp. MED193]
 gi|85824457|gb|EAQ44660.1| CBS domain protein [Roseobacter sp. MED193]
          Length = 144

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     + DA  +LS+K  G V V  +GQ   GI++E DI R             V   M
Sbjct: 18  VAPDASVADAAALLSDKGIGTVVVSSDGQTADGILSERDIVRELGTSGSGCLQKPVSAYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     + +   ++ + +     + VV +  K +G+V   D+++ 
Sbjct: 78  TTKLVTCSSQSNVEDVLKQMTEGRFRHMPVV-EDGKMVGLVSLGDVVKA 125



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  D  +  A  LL    I  ++V  D Q A GI+   D++R 
Sbjct: 16  VTVAPDASVADAAALLSDKGIGTVVVSSDGQTADGILSERDIVRE 60



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G  G+  +      +    +        + D +  ++E RF  + VV E  K+ G+++ G
Sbjct: 62  GTSGSGCLQKPVSAYMTTKLVTCSSQSNVEDVLKQMTEGRFRHMPVV-EDGKMVGLVSLG 120

Query: 271 DIFRN 275
           D+ + 
Sbjct: 121 DVVKA 125


>gi|114321822|ref|YP_743505.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228216|gb|ABI58015.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 840

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 50/126 (39%), Gaps = 1/126 (0%)

Query: 212 KLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           +    ++   +V  +  + PLV      L  A   + E       +        GI+TE 
Sbjct: 125 QGMEPYLRLREVGAAMRTAPLVLAADTRLSQAARRMRESERDAAVIRFADTDDLGIVTER 184

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ R   +      +  +  +    +  + +L  A  +L  H +  L V+DD  + +G++
Sbjct: 185 DLVRCIARYPGDTPIGHLASRPLLTVAANDMLIRARDMLMDHQVRHLAVLDDRGQVVGLL 244

Query: 331 HFLDLL 336
            F DLL
Sbjct: 245 GFQDLL 250



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 46/118 (38%), Gaps = 10/118 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  +     L +       +R     V+D G +  G++++ D  + +     L   
Sbjct: 75  MSSPVACIPGETELGEVAMRFRAERCRHFLVIDRGGQPLGLVSQTDVALNQGMEPYLRLR 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV----VDDCQKAIGIVHFLDLLR 337
            V   M   P V+  DT L+ A + +R+      ++     DD    +GIV   DL+R
Sbjct: 135 EVGAAMRTAPLVLAADTRLSQAARRMRESERDAAVIRFADTDD----LGIVTERDLVR 188



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/126 (18%), Positives = 43/126 (34%), Gaps = 11/126 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +  +    ++ S           PL  A   ++E++   + V+ E  +  GI TE D  
Sbjct: 1   MSHQLPVERIVQSSILHC--GPETPLCQAAERMAERQCSSILVM-EADRAVGIWTERD-- 55

Query: 274 RNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                D +        + + M      I  +T L       R       +V+D   + +G
Sbjct: 56  -ALAVDFSDPSAIRRPIREAMSSPVACIPGETELGEVAMRFRAERCRHFLVIDRGGQPLG 114

Query: 329 IVHFLD 334
           +V   D
Sbjct: 115 LVSQTD 120


>gi|269126850|ref|YP_003300220.1| IMP dehydrogenase family protein [Thermomonospora curvata DSM
           43183]
 gi|268311808|gb|ACY98182.1| IMP dehydrogenase family protein [Thermomonospora curvata DSM
           43183]
          Length = 479

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 62/182 (34%), Gaps = 12/182 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P  +A M    G  +A  +      +    D     P   +  + 
Sbjct: 31  LDVDLTTVDGSGTTIPLVAANMTAVSGRRMAETIARRGGLAVIPQDI----PIEVVADVI 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+   +       +A+ +L ++  G V VVD+  +  G++TE D      
Sbjct: 87  AWVKQRHLVFDTPIRLSPSGTAGEALGLLHKRAHGAVIVVDDDDRPVGVVTEADC----Q 142

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  V ++M ++   +  DTL    A   L +    +  VVD   + +G++     L
Sbjct: 143 GVDRFTQVREIMSRDLVTL-PDTLAPQEAFDRLHERGHRLAPVVDADGRLVGVLTRTGAL 201

Query: 337 RF 338
           R 
Sbjct: 202 RA 203


>gi|257093518|ref|YP_003167159.1| inosine-5'-monophosphate dehydrogenase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257046042|gb|ACV35230.1| inosine-5'-monophosphate dehydrogenase [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 485

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 63/167 (37%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL +          +           V   +     D I  
Sbjct: 40  NLPLVSAAMDTVTESRLAIALAQEGGIGIVHKNLSPKAQAAEAAKVKRFESGILKDPIT- 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + D + +    R   V V+D G+ + GI+T  D+   F   L+   V ++M   
Sbjct: 99  VSPSMSVRDVLALTRLHRISGVPVLD-GRVVVGIVTNRDLR--FETRLDQ-PVSNIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E   +     L+ +H +  ++VV+D  +  G++   D+++
Sbjct: 155 ERLVTVQEGATVEEGKALIHKHRLERVLVVNDAFELRGLITVKDIIK 201


>gi|169634756|ref|YP_001708492.1| IMP dehydrogenase [Acinetobacter baumannii SDF]
 gi|169794362|ref|YP_001712155.1| IMP dehydrogenase [Acinetobacter baumannii AYE]
 gi|184159835|ref|YP_001848174.1| IMP dehydrogenase/GMP reductase [Acinetobacter baumannii ACICU]
 gi|213159060|ref|YP_002321058.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|215481920|ref|YP_002324102.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB307-0294]
 gi|239503840|ref|ZP_04663150.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB900]
 gi|260557916|ref|ZP_05830129.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           ATCC 19606]
 gi|301344653|ref|ZP_07225394.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB056]
 gi|301512799|ref|ZP_07238036.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB058]
 gi|301597478|ref|ZP_07242486.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB059]
 gi|332850170|ref|ZP_08432557.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6013150]
 gi|332868953|ref|ZP_08438512.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6013113]
 gi|332872831|ref|ZP_08440796.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6014059]
 gi|169147289|emb|CAM85150.1| IMP dehydrogenase [Acinetobacter baumannii AYE]
 gi|169153548|emb|CAP02716.1| IMP dehydrogenase [Acinetobacter baumannii]
 gi|183211429|gb|ACC58827.1| IMP dehydrogenase/GMP reductase [Acinetobacter baumannii ACICU]
 gi|193078659|gb|ABO13710.2| IMP dehydrogenase [Acinetobacter baumannii ATCC 17978]
 gi|213058220|gb|ACJ43122.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB0057]
 gi|213987676|gb|ACJ57975.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           AB307-0294]
 gi|260408707|gb|EEX02012.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           ATCC 19606]
 gi|322509747|gb|ADX05201.1| Inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           1656-2]
 gi|323519762|gb|ADX94143.1| IMP dehydrogenase/GMP reductase [Acinetobacter baumannii
           TCDC-AB0715]
 gi|332731019|gb|EGJ62325.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6013150]
 gi|332732996|gb|EGJ64198.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6013113]
 gi|332738992|gb|EGJ69854.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter baumannii
           6014059]
          Length = 488

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I S      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVSPETTVRELIAITSANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 203


>gi|77165478|ref|YP_344003.1| CBS domain-containing protein [Nitrosococcus oceani ATCC 19707]
 gi|76883792|gb|ABA58473.1| CBS domain containing protein [Nitrosococcus oceani ATCC 19707]
          Length = 286

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMIKNP 293
             +++A   +     G + VV +  ++ GI+T+ D+  R      D    ++ +VM  +P
Sbjct: 18  SSVLEAARAMENNSIGAI-VVQDHGRIVGIVTDRDLAVRALGHKLDPENTAITEVMTPSP 76

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++        A+ L++Q N+  +  + +  + +G+V   DLL
Sbjct: 77  LMLTLADSREEAIALMQQGNVRRIP-LSENNRVVGMVTLDDLL 118


>gi|326498921|dbj|BAK02446.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 220

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + VVD  ++  G++ + D  R  H   +   + DVM      +  D  +T A  L+ + 
Sbjct: 130 GLPVVDSARRCVGVVVKSDRARASHG--SRTKIADVMTSPAITLSCDKTVTDAAALMLKK 187

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  L +V+   + IGIV   D+LR 
Sbjct: 188 KIHRLPIVNQDNQVIGIVTRDDVLRA 213



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 23/48 (47%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
                + DA  ++ +K+   + +V++  ++ GI+T  D+ R     L 
Sbjct: 172 SCDKTVTDAAALMLKKKIHRLPIVNQDNQVIGIVTRDDVLRALEAMLK 219


>gi|150397668|ref|YP_001328135.1| RpiR family transcriptional regulator [Sinorhizobium medicae
           WSM419]
 gi|150029183|gb|ABR61300.1| transcriptional regulator, RpiR family [Sinorhizobium medicae
           WSM419]
          Length = 296

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 53/147 (36%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q   A++ +     R+   G G SG +           G P      A      + M+  
Sbjct: 131 QVSRAIDALSKAS-RIEFFGFGASGIVARDAQQKFPLFGVPCGAETDAHQQIMVVSMLKP 189

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+ +V+S +G++  +      AR     +I I       +    DIVL    E     +
Sbjct: 190 GDVAVVISNTGATLAIIETARRARESGCQVIGIVGS-DGPLVEFCDIVLM--VETLENTN 246

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              PT S I  L + D L+ ++   R 
Sbjct: 247 IYTPTISRIAALTVIDILSTSVALRRG 273


>gi|50121405|ref|YP_050572.1| DNA-binding transcriptional regulator HexR [Pectobacterium
           atrosepticum SCRI1043]
 gi|49611931|emb|CAG75380.1| hex regulon repressor [Pectobacterium atrosepticum SCRI1043]
          Length = 289

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL  ++SSL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 97  KIFESAMAGLEQVKSSLD---IAAVNRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              +  D+++++S +G +  L  +   AR     +IAITS+ 
Sbjct: 153 FNIPVVYFDDIVMQRMSCMNSSDGDVVVLISHTGRTKSLVEMAQLARENDATVIAITSDG 212

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
              +A  A + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 213 T-PLAREASLALRLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGEKFRD 264


>gi|304406847|ref|ZP_07388502.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus curdlanolyticus YK9]
 gi|304344380|gb|EFM10219.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus curdlanolyticus YK9]
          Length = 450

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/126 (16%), Positives = 49/126 (38%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D++       ++     +     +  +       V+DE  ++ G++T  D 
Sbjct: 193 IKRKIMLVEDIVAMSKPAQVLMPTDTVAAFQRLAVQTGLSRFPVIDERGRVAGMMTAKDA 252

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      +++ VM ++P  +  +  +  A   +    I +L VVD  +K +G+V  
Sbjct: 253 VDAAE----DQTLDRVMTRHPITVAPNIAVASAAHTMASEGIDLLPVVDRHRKLLGVVSR 308

Query: 333 LDLLRF 338
            D+L  
Sbjct: 309 RDVLDA 314


>gi|167856587|ref|ZP_02479290.1| putative HTH-type transcriptional regulator [Haemophilus parasuis
           29755]
 gi|167852286|gb|EDS23597.1| putative HTH-type transcriptional regulator [Haemophilus parasuis
           29755]
          Length = 288

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q  L ++IAE   L                  VE+++    R+ + G+G SG       
Sbjct: 106 LQNTLNNVIAETVNLLDYAE---------LEKVVEELRKAD-RIFLFGVGSSGLTAEDAQ 155

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +  V      +    ++ + D++I +S SG S+E    L  +R      +A
Sbjct: 156 HKLMRIGLHAAAVTNNHFMYMQAALLKKGDIVIGISHSGYSEETTKALKISRDNGAITVA 215

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IT   +S +   AD VL                 + + QL + D +   L+++
Sbjct: 216 ITHNLRSPITEEADYVLINGNRQG--HMQGDSIGTKMTQLFVLDLIYALLVKA 266


>gi|149010620|ref|ZP_01831991.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP19-BS75]
 gi|147765101|gb|EDK72030.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae SP19-BS75]
          Length = 218

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQELHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQELHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|45358815|ref|NP_988372.1| CBS domain-containing protein [Methanococcus maripaludis S2]
 gi|45047681|emb|CAF30808.1| CBS domain [Methanococcus maripaludis S2]
          Length = 279

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 55/126 (43%), Gaps = 15/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
              +++     G  L D    +    F  + VV E  KL GIIT  D  + F  D     
Sbjct: 151 CMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKLFGSDWAFNH 209

Query: 280 --------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   +  + ++D+M  N   +  +  L  A++ + + NI VL VVD  +K IG++ 
Sbjct: 210 MKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD-GEKLIGLIT 268

Query: 332 FLDLLR 337
             D+++
Sbjct: 269 EKDIVK 274



 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 2/128 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                 +         D++ L+K    L + I +  +K+ G + V+D+   L   I E D
Sbjct: 74  HNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERD 133

Query: 272 IFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +     ++  L V+D M +N         L    + + ++    L VV +  K +GI+
Sbjct: 134 VIKYLKDQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGII 192

Query: 331 HFLDLLRF 338
              D ++ 
Sbjct: 193 TSTDFVKL 200



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+T++ ++    + V D G  +++GI+T  DI                   
Sbjct: 15  VYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNH 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+++M  N  +I E+  L   + L  +  I  + V+D     I  ++  D+
Sbjct: 75  NMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDV 134

Query: 336 LRF 338
           +++
Sbjct: 135 IKY 137



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                    +I  V     L+DAI  ++E   G + VVD G+K
Sbjct: 204 DWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKLVDAIKKMNELNIGVLPVVD-GEK 262

Query: 263 LKGIITEGDIFRNFHK 278
           L G+ITE DI +  +K
Sbjct: 263 LIGLITEKDIVKCIYK 278


>gi|295677060|ref|YP_003605584.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
 gi|295436903|gb|ADG16073.1| CBS domain containing protein [Burkholderia sp. CCGE1002]
          Length = 155

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I     ++   + T ++  VM
Sbjct: 17  VTPDTTLHDAVITMAEHDIGSL-VVMEYGDLVGMLTFREIILTLKENGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVM-ESRTLMGVISFYDVAKA 123



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTTLHDAVITMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|258424629|ref|ZP_05687506.1| sugar isomerase [Staphylococcus aureus A9635]
 gi|257845224|gb|EEV69261.1| sugar isomerase [Staphylococcus aureus A9635]
          Length = 266

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 83/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        ++++ D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSQSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|291300244|ref|YP_003511522.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569464|gb|ADD42429.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 304

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 70/162 (43%), Gaps = 6/162 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R ++     +      +   A+    A   RV + G+G SG    ++A  L     P +
Sbjct: 116 TRAIADTAFQVDTAAIDRIATAI----AAASRVELCGMGSSGTAAREMAFRLERIRVPCW 171

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F   A  +  +  ++T  D+ I +S SG + E+  +L  A       +A+TS  +S +A 
Sbjct: 172 FRPDAHTALTNAALLTESDVAIGISHSGRTREIVEVLAEAGSHGALTVAVTSFRRSPLAD 231

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD+VL+      +     A  ++   QL + D + +A+ + 
Sbjct: 232 TADVVLSTQVFETTFRL--AALSALHSQLLLLDLIYVAVAQR 271


>gi|289583502|ref|YP_003481912.1| putative signal transduction protein with CBS domains [Natrialba
           magadii ATCC 43099]
 gi|289533000|gb|ADD07350.1| putative signal transduction protein with CBS domains [Natrialba
           magadii ATCC 43099]
          Length = 407

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 52/130 (40%), Gaps = 12/130 (9%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P  KLG+L      +               +     ++++     + V  E  + +G+
Sbjct: 58  RQPNEKLGSLVWHVPRLT----------PDEDVRKVAQLMNDSGSQLLPVF-EDDEFRGV 106

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T   I       L+  +V +    + + +  +  L  A+   R+++I+ L VVD+   A
Sbjct: 107 VTVDGILEAVQPYLDAATVSEAASTDLRTLSPNARLGEALNTFRENHITHLPVVDN-GSA 165

Query: 327 IGIVHFLDLL 336
           +GI+   D+ 
Sbjct: 166 VGILSLYDVT 175



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 42/143 (29%), Gaps = 42/143 (29%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------------- 272
                L +A+    E     + VVD      GI++  D+                     
Sbjct: 137 SPNARLGEALNTFRENHITHLPVVD-NGSAVGILSLYDVTDLTVRAEVRSQGGDAGGVDP 195

Query: 273 -------------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
                                   + +    V+DVM    + +     L   ++ + + N
Sbjct: 196 FGGEISSSTARARRGGFGAREGERERMLDFPVQDVMATPVRTVSPSETLETVVEEMFEVN 255

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
            S L+V DD     GIV   D+L
Sbjct: 256 ASSLVVTDD-GSPHGIVTKTDVL 277


>gi|118580675|ref|YP_901925.1| CBS domain-containing protein [Pelobacter propionicus DSM 2379]
 gi|118503385|gb|ABK99867.1| CBS domain containing membrane protein [Pelobacter propionicus DSM
           2379]
          Length = 150

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  VK    + +   I  E   G + VVD+G    GI+TE D+             
Sbjct: 8   MTTEVITVKRETTVRELAEIFKEHPIGSLPVVDDGGAPTGIVTESDLIEQGRSLHIPTVI 67

Query: 274 ------------RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       ++  +DL  ++   V ++  +    I  D  ++ A  L+    ++ L 
Sbjct: 68  SLFDWVIPLGGEKSLQRDLQRITAQNVGEIYSRELVCIAPDAPVSTAADLMSSRRLNSLP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+    K +GIV  +D++R
Sbjct: 128 VL-QEGKLVGIVSRIDIIR 145



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 27/57 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +V D+M      +  +T +    ++ ++H I  L VVDD     GIV   DL+  G
Sbjct: 2   QTVADIMTTEVITVKRETTVRELAEIFKEHPIGSLPVVDDGGAPTGIVTESDLIEQG 58



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +    P+  A  ++S +R   + V+ E  KL GI++  DI R+ 
Sbjct: 105 IAPDAPVSTAADLMSSRRLNSLPVLQE-GKLVGIVSRIDIIRSL 147


>gi|307718088|ref|YP_003873620.1| sodium/hydrogen exchanger family protein [Spirochaeta thermophila
           DSM 6192]
 gi|306531813|gb|ADN01347.1| sodium/hydrogen exchanger family protein [Spirochaeta thermophila
           DSM 6192]
          Length = 557

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LS 284
                +V     L + + + +E  +   AVVD   + +G++   ++     +      + 
Sbjct: 430 PADRAVVPNTIRLSELLRLYAEHDWNVWAVVDAEGRYRGVVGFENLREALAEPELQEFVI 489

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            ED++   P+ +   T L  A++++R+ N+  L V+DD    +GI+
Sbjct: 490 AEDILTPFPETVHPHTPLHEALRIMRRRNVDFLPVLDDRGHVLGIL 535



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL +A+ I+  +    + V+D+   + GI+ E  +     ++L +    
Sbjct: 501 VHPHTPLHEALRIMRRRNVDFLPVLDDRGHVLGILEERMVRHFVRRELLSAQAR 554


>gi|226304706|ref|YP_002764664.1| RpiR family transcriptional regulator [Rhodococcus erythropolis
           PR4]
 gi|226183821|dbj|BAH31925.1| putative RpiR family transcriptional regulator [Rhodococcus
           erythropolis PR4]
          Length = 291

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/158 (22%), Positives = 61/158 (38%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
             L+ + Q          V +I++ + RV + GIG SG +   L   L+           
Sbjct: 117 EQLKGTAQLTDPVALEAVVSRIRSAR-RVEVYGIGASGIVAQDLTLKLSRIDVNCRVHLD 175

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +A+     ++  DD+ + +S SG + ++   L  ARR      AIT   +S +A  +  
Sbjct: 176 RDAAMVSASLLGPDDIAVGISHSGETSDVVEPLALARRTGASTAAITGGARSTLAVQSHH 235

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           VL             A   S   QL + D +   +  S
Sbjct: 236 VLLT--AGREFGFRSAAMASRTGQLLVVDTIFAMVAHS 271


>gi|167838553|ref|ZP_02465412.1| CBS domain protein [Burkholderia thailandensis MSMB43]
          Length = 149

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 51/119 (42%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIF---RNFHKD 279
           S   +    + C  ++    +     G + V+   D      G++T+ D+        +D
Sbjct: 7   STQPVEFCTVDCSALELAERMRHVHVGDIVVIEYRDGDAVPIGLVTDRDLVIEVMARGED 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              ++   +M +   V+ E   + VA++ +R+  I  L VVDD  +  GIV   D++ +
Sbjct: 67  PGHVTAGQIMSRGLIVVSETDEIAVALEEMRRSGIRRLPVVDDAGRLTGIVTLDDIVEY 125



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 7/93 (7%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDA+ I L+  R+            G +    + +  ++       +V     +  A+  
Sbjct: 43  GDAVPIGLVTDRDLVIEVMARGEDPGHVTAGQIMSRGLI-------VVSETDEIAVALEE 95

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +       + VVD+  +L GI+T  DI      
Sbjct: 96  MRRSGIRRLPVVDDAGRLTGIVTLDDIVEYLAA 128


>gi|151220471|ref|YP_001331293.1| hypothetical protein NWMN_0259 [Staphylococcus aureus subsp. aureus
           str. Newman]
 gi|150373271|dbj|BAF66531.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           str. Newman]
          Length = 266

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQAF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|72495442|dbj|BAE18763.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 183

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  ++++L      +    +++I   + +V ++G G+SG + +  A  L   G  +  V 
Sbjct: 12  LDEIDNTLSHVKDSEAETFLKQIIKAE-QVFVSGKGRSGFVANSFAMRLNQLGKGAHVVG 70

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         IT  DL ++LS SGS++ L+ +   A+     ++ +++   S +   A+
Sbjct: 71  ESTTP-----SITEKDLFVILSGSGSTEHLRLLADKAKAVGAEVVLLSTNPTSKIGELAN 125

Query: 158 IVLTLPKEPESCPHGLA-PTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G A P  S   Q      D++ + L+   N  E      H
Sbjct: 126 AVIELPAGTKYDTEGSAQPLGSLFEQASQVFLDSIVLDLMTEINVDEETMQQNH 179


>gi|315230762|ref|YP_004071198.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
           barophilus MP]
 gi|315183790|gb|ADT83975.1| inosine-5'-monophosphate dehydrogenase like protein [Thermococcus
           barophilus MP]
          Length = 179

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 49/119 (41%), Gaps = 5/119 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    +          +VK    +     IL++ +     +V E  ++ GI+T+ DI   
Sbjct: 1   MMPKITVEQVLKRKAVVVKPEDTVDKVAKILAKNKVSSAVIV-ENDEIIGIVTDRDILDK 59

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                K+   + V ++M KNP  I  D  +  A++L+    +  ++V     K IG V 
Sbjct: 60  IVAKGKNPKHIKVREIMTKNPVRIEYDYDIQDAIELMMDKGVRRILVT-KLGKPIGFVT 117


>gi|15902708|ref|NP_358258.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae R6]
 gi|116516866|ref|YP_816151.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae D39]
 gi|148992416|ref|ZP_01822111.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
           SP9-BS68]
 gi|168488422|ref|ZP_02712621.1| AcuB family protein [Streptococcus pneumoniae SP195]
 gi|182683674|ref|YP_001835421.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae CGSP14]
 gi|303255831|ref|ZP_07341872.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae BS455]
 gi|15458251|gb|AAK99468.1| Conserved hypothetical protein [Streptococcus pneumoniae R6]
 gi|116077442|gb|ABJ55162.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae D39]
 gi|147928733|gb|EDK79746.1| hypothetical protein CGSSp9BS68_08357 [Streptococcus pneumoniae
           SP9-BS68]
 gi|182629008|gb|ACB89956.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae CGSP14]
 gi|183573030|gb|EDT93558.1| AcuB family protein [Streptococcus pneumoniae SP195]
 gi|301801601|emb|CBW34299.1| conserved hypothetical protein [Streptococcus pneumoniae INV200]
 gi|302597215|gb|EFL64320.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae BS455]
 gi|332073120|gb|EGI83599.1| CBS domain pair family protein [Streptococcus pneumoniae GA17570]
          Length = 218

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQELHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQELHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|268326132|emb|CBH39720.1| probable voltage gated chloride channel [uncultured archaeon]
 gi|268326292|emb|CBH39880.1| putative voltage-gated chloride channel [uncultured archaeon]
          Length = 612

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 20/116 (17%), Positives = 48/116 (41%), Gaps = 5/116 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           + +  +     + +A+  +         VVD+  ++ GI +  D+ +   +      V  
Sbjct: 483 EDVQTISADTTVKEALYFVDRTGHIAYPVVDKEGRMVGITSLMDLEKQRKEGSVYRKVSL 542

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-----DDCQKAIGIVHFLDLLRF 338
           +  K   V   D  L  A+  +  +++  L VV     ++ ++ +GI+   D++R 
Sbjct: 543 MCTKEVLVAYPDEFLEDALHKMDIYHVGRLPVVKGQSEEENKELVGIISRADIIRE 598



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 273 FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLL-RQHNISVLMVVDDCQKAIGIV 330
            R F  DL   + V+D  I++ + I  DT +  A+  + R  +I    VVD   + +GI 
Sbjct: 464 RREFMVDLLEGIRVKDAYIEDVQTISADTTVKEALYFVDRTGHI-AYPVVDKEGRMVGIT 522

Query: 331 HFLDL 335
             +DL
Sbjct: 523 SLMDL 527


>gi|307153867|ref|YP_003889251.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
 gi|306984095|gb|ADN15976.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
          Length = 1486

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 232 LVKIGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSV 285
           ++     +++AIT L  +R        AVV E  ++ GI+T+GDI     +   L+ L++
Sbjct: 18  VLSPDTKVLEAITSLINQRSQPVKSNCAVVVENGQIVGIVTKGDILVALAQSQTLDFLTI 77

Query: 286 EDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             VM     ++ E     L  A+ L + H+I  L ++D     +G++ 
Sbjct: 78  SQVMSSPVVMLRESEFTGLESAINLFQTHSIDHLPIIDSENHLVGLLT 125


>gi|116252280|ref|YP_768118.1| hypothetical protein RL2534 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|241204773|ref|YP_002975869.1| signal transduction protein with CBS domains [Rhizobium
           leguminosarum bv. trifolii WSM1325]
 gi|115256928|emb|CAK08022.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|240858663|gb|ACS56330.1| putative signal transduction protein with CBS domains [Rhizobium
           leguminosarum bv. trifolii WSM1325]
          Length = 144

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVMIK 291
               + +A  ILS+K+ G + VV    ++ G+ TE D+     K        S+  VM  
Sbjct: 21  PNTTVAEAAAILSKKKIGAIVVVGMENRISGMFTERDLVHAIAKHGKEGLDHSLAQVMTA 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                 E+T +   M+L+       + V +   K  GI+   D+++  I
Sbjct: 81  KVYRCHEETTVNELMELMTSRRFRHVPV-ESNGKLAGIISIGDVVKSRI 128



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 9/48 (18%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++      +T +  A  +L +  I  ++VV    +  G+    DL+  
Sbjct: 14  RDVVTAGPNTTVAEAAAILSKKKIGAIVVVGMENRISGMFTERDLVHA 61


>gi|69248338|ref|ZP_00604725.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257883559|ref|ZP_05663212.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257891901|ref|ZP_05671554.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|258616982|ref|ZP_05714752.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecium DO]
 gi|260562619|ref|ZP_05833121.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|261207961|ref|ZP_05922641.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|293569090|ref|ZP_06680401.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
 gi|294622940|ref|ZP_06701835.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|314998005|ref|ZP_07862899.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|68194447|gb|EAN08949.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257819217|gb|EEV46545.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257828261|gb|EEV54887.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|260072947|gb|EEW61300.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|260077831|gb|EEW65542.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|291588201|gb|EFF20038.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
 gi|291597649|gb|EFF28805.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|309385939|gb|ADO66854.1| helix-turn-helix protein RpiR [Enterococcus faecium]
 gi|313587989|gb|EFR66834.1| SIS domain protein [Enterococcus faecium TX0133a01]
          Length = 272

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 4/152 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L S+++     + + A++ I   K  + I G+G SG+    L +     G  +  V  
Sbjct: 97  EALYSTIRLLDEEKLNEAIKMITQSKN-IYIFGVGSSGNTSLDLENMFLRVGVQAKAVLD 155

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                    ++T +DL+I+ S SG + +    L  A++    +IAIT+   S +   AD+
Sbjct: 156 PHFQAQVASLLTVNDLVIIFSLSGKTKDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADL 215

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           VL    E              I QL I D L 
Sbjct: 216 VLQTAIEEF---LNGGSLAGKISQLYICDLLV 244


>gi|328477234|gb|EGF47426.1| sugar isomerase (SIS) [Lactobacillus rhamnosus MTCC 5462]
          Length = 184

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/180 (22%), Positives = 67/180 (37%), Gaps = 12/180 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L  L  +       +      KI +    + + G G+SG      A+ L   G    
Sbjct: 7   IDILQELSQAAPKIKPDELDKMATKILSA-NHIFLAGAGRSGVAIQAFANRLLHLGFDES 65

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    + H         DL+I+ S SG +  LK +   A++  + L  IT++  S +  
Sbjct: 66  VVGEISSPHS-----QPGDLLIICSGSGETTSLKNLAQSAKQAQVQLALITTKPASTIGQ 120

Query: 155 HADIVLTLPKEPESCPHG----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            AD VL LP + ++          P  S   QLA    D L + L++    +    +  H
Sbjct: 121 LADQVLVLPCKAKTEAATEDAFSQPMGSEFEQLAFLTFDGLIMNLMDKTGETSATMFARH 180


>gi|304314895|ref|YP_003850042.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588354|gb|ADL58729.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 134

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------HK 278
               I  V      ++A   + +     + V+D+  K  G+++  D+             
Sbjct: 7   MNPEIITVSPETRPLEAFEKMYKHGVRRLFVLDDDGKPVGVVSYTDLIGVLGSIKPDSEH 66

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               L V ++M+     I  D  +  A  L+ + +IS L+V+DD  K +G++   D+ R 
Sbjct: 67  PERDLKVSNIMVDEVITISADDNIEDAANLMLRADISGLLVMDDD-KPVGVITKTDICRL 125



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + V++ M      +  +T    A + + +H +  L V+DD  K +G+V + DL+  G++
Sbjct: 1   MKVKEAMNPEIITVSPETRPLEAFEKMYKHGVRRLFVLDDDGKPVGVVSYTDLI--GVL 57


>gi|294496676|ref|YP_003543169.1| peptidase M50 [Methanohalophilus mahii DSM 5219]
 gi|292667675|gb|ADE37524.1| peptidase M50 [Methanohalophilus mahii DSM 5219]
          Length = 366

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 50/125 (40%), Gaps = 2/125 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +                +  V     L + +  + + +     V+ +   LKGI+T  D
Sbjct: 236 AVTRTLENVKVKDVMSSDVISVSPEMNLEELVQFMFDHKHMGYPVI-QHNVLKGIVTFTD 294

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + +    D  +  V DVM ++   I        A ++L  +N+  L+V+ +  + IGI+ 
Sbjct: 295 VHKVTQLDRISTLVSDVMTRDVVTISPGDNAAEAFKVLNNNNVGRLVVM-EDGEIIGILS 353

Query: 332 FLDLL 336
             DL+
Sbjct: 354 RTDLM 358


>gi|253735059|ref|ZP_04869224.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|253726955|gb|EES95684.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
          Length = 266

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 36/199 (18%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  V+  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HVLFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|239906613|ref|YP_002953354.1| hypothetical protein DMR_19770 [Desulfovibrio magneticus RS-1]
 gi|239796479|dbj|BAH75468.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 616

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 69/231 (29%), Gaps = 19/231 (8%)

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + E    +   +R S+  +     +    A        L         G     ++  
Sbjct: 54  GETTE--EAVCCIQRGSVVFVGQGDASGLADARGEGECFGLGGALPGASEGCRAVAASDA 111

Query: 182 QLAIGDALAIALLESRN-FSENDFY--------------VLHPGGKLGTLFVCASDVMHS 226
            L      A A +  R+ F    F                L      G           +
Sbjct: 112 FLVRLPGAAYAAMARRHPFVAAYFANCLDKQACRADDGLGLEAAEADGDYLFTRLAGEVA 171

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSV 285
              I  V  G  L     ++ E   G V V +    + GI+T+ D+ R   + +     V
Sbjct: 172 SPGIVSVARGTDLPATARVMEEAGVGSVLVREASGTVIGIVTDRDLRRAVARGMGLAAPV 231

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E +M      I   T    A+  + +  I  L+V     +  G+V   DLL
Sbjct: 232 ETLMSTPVAAIDAVTPCFEALSRMTEAGIRHLLVT-RDGEPAGLVTANDLL 281



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 7/70 (10%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD        L T    +V       +   T L    +++ +  +  ++V +     IG
Sbjct: 158 DGD-------YLFTRLAGEVASPGIVSVARGTDLPATARVMEEAGVGSVLVREASGTVIG 210

Query: 329 IVHFLDLLRF 338
           IV   DL R 
Sbjct: 211 IVTDRDLRRA 220


>gi|332527178|ref|ZP_08403251.1| inosine-5'-monophosphate dehydrogenase [Rubrivivax benzoatilyticus
           JA2]
 gi|332111602|gb|EGJ11584.1| inosine-5'-monophosphate dehydrogenase [Rubrivivax benzoatilyticus
           JA2]
          Length = 490

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 61/167 (36%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVH-KNLTPRQQAAEVARVKRYESGVLRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +   +  +  F    V+ EG K+ GI+T  D+   F   L    V +VM   
Sbjct: 99  VTPETTVREVRELSRQHGFSGFPVL-EGPKVVGIVTNRDLR--FETRL-DAPVREVMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                + E+  L  A  L+ +H +  ++VV++  +  G++   D+ +
Sbjct: 155 ERLVWVGEEASLDEAKALMHRHKLERVLVVNEAFELRGLMTVKDITK 201


>gi|320162214|ref|YP_004175439.1| hypothetical protein ANT_28130 [Anaerolinea thermophila UNI-1]
 gi|319996068|dbj|BAJ64839.1| hypothetical protein ANT_28130 [Anaerolinea thermophila UNI-1]
          Length = 138

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 43/115 (37%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDI---FRNFHKDLN 281
             D + +V+   P+ + +  +  +    V V    +    GIIT  DI        ++  
Sbjct: 9   MIDLVVMVEPDLPVTEVLATMRRRYIHSVIVNKSAEHPEYGIITSTDICDKIVAAGRNPA 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   ++M      +  +  +    +L+ +  I  L V D     IG++   D L
Sbjct: 69  KIKAAEIMSSPIITVSPEMKIDECAKLMSEKGIHHLPVADKAGNVIGMISATDFL 123



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/74 (16%), Positives = 24/74 (32%), Gaps = 3/74 (4%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
             G               I  V     + +   ++SEK    + V D+   + G+I+  D
Sbjct: 62  AAGRNPAKIKAAEIMSSPIITVSPEMKIDECAKLMSEKGIHHLPVADKAGNVIGMISATD 121

Query: 272 ---IFRNFHKDLNT 282
              +     +D + 
Sbjct: 122 FLVVAEAMGRDGDR 135


>gi|304437903|ref|ZP_07397850.1| RpiR family transcriptional regulator [Selenomonas sp. oral taxon
           149 str. 67H29BP]
 gi|304369125|gb|EFM22803.1| RpiR family transcriptional regulator [Selenomonas sp. oral taxon
           149 str. 67H29BP]
          Length = 280

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 6/176 (3%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           +G+     +  + A + + A    + +LE +               +   + R+   G+G
Sbjct: 83  RGNIQNGETPRETARKLLSA---NVIALEKTQDIIADETIDRCARLLIGAQ-RIAFIGLG 138

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG I           G                 ++   D+I+ +S SG + ++ A +  
Sbjct: 139 YSGIIAQDSCFKFLRIGMNCIAPRDNHTMRMIAAIMEPGDVIVAISHSGETADILATVDI 198

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           AR   + +I++T  + S +   +D+ LT          G     S   Q  + D +
Sbjct: 199 ARARGLRIISLTEHHPSRLRSASDVSLTYIAAETPLETGSI--ASKTAQFFLVDLV 252


>gi|303247655|ref|ZP_07333925.1| Nucleotidyl transferase [Desulfovibrio fructosovorans JJ]
 gi|302490927|gb|EFL50824.1| Nucleotidyl transferase [Desulfovibrio fructosovorans JJ]
          Length = 354

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 1/102 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           +V     L DAI  +         V+ E  +L G++++GD+ R   +  +    V D M 
Sbjct: 10  IVSPQTTLRDAIAHIDSTGSQLAVVLHEDGRLAGLLSDGDVRRAILRGCDMQAPVADFMN 69

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            NP      T  +  + L+R+  +  + +VD+  + + IV  
Sbjct: 70  CNPTTASISTTSSELLALMRRKVLRHIPLVDENLRVVEIVTL 111


>gi|271500722|ref|YP_003333747.1| RpiR family transcriptional regulator [Dickeya dadantii Ech586]
 gi|270344277|gb|ACZ77042.1| transcriptional regulator, RpiR family [Dickeya dadantii Ech586]
          Length = 289

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/204 (19%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  ++SSL  +     + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVEEDDSVESYTSKIFESTMAALEQVKSSLDIQ---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   + ++   G G S  +     +       P  +                 D+++++S
Sbjct: 125 LTQAR-KISFFGFGASAAVAHDAMNKFFRFNIPVVYFDDLVMQRMSCMNSGEGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IAITSE  S ++  A +VL +    ++  +   P  S 
Sbjct: 184 HTGRTKSLVGMARLARENDATVIAITSEG-SPLSREASLVLQVDVPEDTDVY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           I QL + D LA      R     D
Sbjct: 241 IAQLTLIDVLATGFTLRRGAKFRD 264


>gi|158338538|ref|YP_001519715.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308779|gb|ABW30396.1| CBS domain pair [Acaryochloris marina MBIC11017]
          Length = 324

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 41/223 (18%), Positives = 73/223 (32%), Gaps = 22/223 (9%)

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           +E              L+ + +     ++        L    +        TT     L 
Sbjct: 14  EEAINYQPLILAPETALVDVIAR----MSQTPFSCCELGASSQDSGDVETETTRPTCALI 69

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           + D   + +L  R     D       G        A  + H   ++PL        D   
Sbjct: 70  MQDQEILGILTER-----DIVRFAAAGMDCDRITAADVMAHPVKTLPL----ADFKDIFA 120

Query: 245 IL---SEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILED 299
           ++      R   + ++D+  KL GI     + R       L    V +VM  +       
Sbjct: 121 VMFLFRRYRIRHLPILDDQNKLVGITEPSSLRRVLRPANLLKLRRVSEVMSTSVIHAPPH 180

Query: 300 TLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLDLLRF 338
             +    QL+ +H +S +++V    DD  K IGIV   D+++F
Sbjct: 181 CSVLSLAQLMAEHRVSCVVIVEPAPDDGLKPIGIVTERDIVQF 223



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/91 (24%), Positives = 39/91 (42%), Gaps = 6/91 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIF--RNFHKD 279
              S+      C ++    +++E R  CV +V    D+G K  GI+TE DI   +    D
Sbjct: 170 MSTSVIHAPPHCSVLSLAQLMAEHRVSCVVIVEPAPDDGLKPIGIVTERDIVQFQAMQFD 229

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           +  +   +VM     ++     L  A Q ++
Sbjct: 230 IGRIMASEVMSSPLFLLNPGDSLWSAHQQMQ 260


>gi|85716116|ref|ZP_01047092.1| CBS domain:Transport-associated domain protein [Nitrobacter sp.
           Nb-311A]
 gi|85697115|gb|EAQ34997.1| CBS domain:Transport-associated domain protein [Nitrobacter sp.
           Nb-311A]
          Length = 247

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 30/135 (22%), Positives = 52/135 (38%), Gaps = 25/135 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
                  V   C +IDA  +L E     + VVD    + GI++EGD  R           
Sbjct: 29  MRAPAVTVAPNCRVIDAARLLMETNRRGLPVVDHSGIIVGIVSEGDFLRRVELETEPTDR 88

Query: 278 ----------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                                 SV+++M ++P  +  D  L  A+ L+  H+++ + VV 
Sbjct: 89  PWFDAFFGIGESAVAFARAYGRSVDEIMTRDPMCVAPDADLIEAIALMESHHVAQIPVV- 147

Query: 322 DCQKAIGIVHFLDLL 336
                +G++   +LL
Sbjct: 148 LKGAVLGMISKAELL 162



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I +     +  +   +VM      +  +  +  A +LL + N   L VVD     +GIV 
Sbjct: 12  ISKENDGWVVHMKASEVMRAPAVTVAPNCRVIDAARLLMETNRRGLPVVDHSGIIVGIVS 71

Query: 332 FLDLLR 337
             D LR
Sbjct: 72  EGDFLR 77


>gi|257894746|ref|ZP_05674399.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|257831125|gb|EEV57732.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
          Length = 272

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 38/152 (25%), Positives = 64/152 (42%), Gaps = 4/152 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L S+++     + + A++ I   K  + I G+G SG+    L +     G  +  V  
Sbjct: 97  EALYSTIRLLDEEKLNEAIKMITQSKN-IYIFGVGSSGNTSLDLENMFLRVGVQAKAVLD 155

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                    ++T +DL+I+ S SG + +    L  A++    +IAIT+   S +   AD+
Sbjct: 156 PHFQAQVASLLTVNDLVIIFSLSGKTKDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADL 215

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           VL    E              I QL I D L 
Sbjct: 216 VLQTAIEEF---LNGGSLAGKISQLYICDLLV 244


>gi|256810339|ref|YP_003127708.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus fervens AG86]
 gi|256793539|gb|ACV24208.1| 6-phospho 3-hexuloisomerase [Methanocaldococcus fervens AG86]
          Length = 177

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 13/167 (7%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
               E   + +  V++I   K ++ + G+G+SG+IG   A  L   G  S+FV  A    
Sbjct: 18  YTNDEWKNRLNSLVDRIIKAK-KIFVFGVGRSGYIGRCFAMRLMHLGFDSYFVGEATTP- 75

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
                  +DDL+I++S SG ++ +  +   A + +  ++AI  E    V   ADI + L 
Sbjct: 76  ----SYEKDDLLILISGSGRTESVLTVAKKAAKINNNIVAIVCE-CGNVVEFADITIQLD 130

Query: 164 KEPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            +         P  +   + A    D +   +++  N  E+     H
Sbjct: 131 VKKSKY----LPMGTTFEETALIFLDLVIAEVMKRLNLDESVVIKRH 173


>gi|73668035|ref|YP_304050.1| hypothetical protein Mbar_A0488 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395197|gb|AAZ69470.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 302

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 10/138 (7%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI----DAITILSEKRFGCVAVVD 258
           D     PG ++          +   D +        L     + + IL  K    V V+ 
Sbjct: 2   DIGERKPGFRIYKGVDYMPKNIFIEDIMVRDVASATLPGSRDEVLKILKNKHISGVPVL- 60

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +  K+ G++T      N  ++     +  +M + P  I   + L  A +LL +H+I  L 
Sbjct: 61  KDSKVVGVVT----RTNLLQNPEEEQLALLMTRGPITISSGSDLQTAARLLLEHHIRRLP 116

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVDD  K +G+V   D++
Sbjct: 117 VVDD-GKLVGLVTVADII 133



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +  G  L  A  +L E     + VVD+  KL G++T  DI          + +
Sbjct: 87  MTRGPITISSGSDLQTAARLLLEHHIRRLPVVDD-GKLVGLVTVADIIGTIADMNIDIPI 145

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +D + K    I  +T L VA +++    +  + V+D   + IGI+   D++   II
Sbjct: 146 KDYVEKEVVAIYSETPLPVAARIMELAGVKAVPVLDSNLELIGIISDRDVIAASII 201



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 26/163 (15%), Positives = 59/163 (36%), Gaps = 36/163 (22%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G +  + +      +    +  +    PL  A  I+       V V+D   +L GII++ 
Sbjct: 134 GTIADMNIDIPIKDYVEKEVVAIYSETPLPVAARIMELAGVKAVPVLDSNLELIGIISDR 193

Query: 271 DIFRN----------------------FHKDLNTLSV--------------EDVMIKNPK 294
           D+                         +    +T+S+               D+MI+ P 
Sbjct: 194 DVIAASIIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIGSDIMIREPI 253

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                T ++   + ++++ I  + +++  +K  G++   DLL+
Sbjct: 254 TATYITSVSDCARKMKRNRIDQVPIINSNRKLQGLLRDHDLLK 296



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +ED+M+++             +++L+  +IS + V+ D  K +G+V   +LL+
Sbjct: 25  IEDIMVRDVASATLPGSRDEVLKILKNKHISGVPVLKDS-KVVGVVTRTNLLQ 76


>gi|73668515|ref|YP_304530.1| hypothetical protein Mbar_A0978 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395677|gb|AAZ69950.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 364

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 49/97 (50%), Gaps = 2/97 (2%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           D +  + EK+     V+ EG  LKGI+T  DI R    D     V D+M ++   +  D 
Sbjct: 263 DLVKFMFEKKHMGYPVM-EGDFLKGIVTFTDIQRIPSVDRPAAKVSDIMTRDVISVSPDA 321

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  ++L+   NI  ++V+D+    +GI+   DL+R
Sbjct: 322 QASDVLKLVSSKNIGRVLVIDN-GSIVGILSRTDLVR 357



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V       D + ++S K  G V V+D    + GI++  D+ R  
Sbjct: 317 VSPDAQASDVLKLVSSKNIGRVLVID-NGSIVGILSRTDLVRTL 359


>gi|116754761|ref|YP_843879.1| Cl- channel, voltage-gated family protein [Methanosaeta thermophila
           PT]
 gi|116666212|gb|ABK15239.1| Cl- channel, voltage-gated family protein [Methanosaeta thermophila
           PT]
          Length = 580

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 60/165 (36%), Gaps = 10/165 (6%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF-------VCASDVMHSGDSIPLVKI 235
           L I  ALA  L    +                          V   + M   + +  V  
Sbjct: 407 LMISSALAYCLSGDHSIYSEQVATRAESPAHRMEMSVDVLKDVSVDEAMVPAEKLVSVSP 466

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              + + + ++ +       VV E   L GI+T  D+      +     V+D+M+++  V
Sbjct: 467 NQKVSEVLALIEKTGHIGFPVV-ENGMLVGIVTFRDVEMVPVGERENKLVKDIMMRDLIV 525

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRF 338
              D  L  A+  L Q ++  L VVD    +  +G++   D+++ 
Sbjct: 526 TYPDESLEDALIKLVQKDVGRLPVVDRKMNRMLLGLITRSDIIKA 570



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 32/83 (38%), Gaps = 4/83 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQ 261
           F  +              D+M     + +      L DA+  L +K  G + VVD    +
Sbjct: 499 FRDVEMVPVGERENKLVKDIMM--RDLIVTYPDESLEDALIKLVQKDVGRLPVVDRKMNR 556

Query: 262 KLKGIITEGDIFRNFHKDLNTLS 284
            L G+IT  DI +   +++  L 
Sbjct: 557 MLLGLITRSDIIKAHAREVAKLK 579


>gi|226359465|ref|YP_002777242.1| hypothetical protein ROP_00500 [Rhodococcus opacus B4]
 gi|226237949|dbj|BAH48297.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 185

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +V+    +  A  +L+E  F  V VVD+  +L G++  GD+ R      ++ +V
Sbjct: 7   MQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAGTA--SSETV 64

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM            +    ++L    +  L VVD   + +GI+   D++R 
Sbjct: 65  GEVMTAPAVAAPMYQYVADVSKMLLHQGLRSLPVVDIDGRVVGILSRSDVVRL 117



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 33/57 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + V +VM +  +V+ +   +  A  LL ++  + + VVDD  + +G+++  D+LR G
Sbjct: 1   MRVLNVMQRPVRVVRQSDSMRTAAVLLAEYGFAAVPVVDDHDRLVGMLNSGDVLRAG 57


>gi|149003370|ref|ZP_01828259.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
           SP14-BS69]
 gi|237650403|ref|ZP_04524655.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae CCRI 1974]
 gi|237822483|ref|ZP_04598328.1| acetoin utilization protein AcuB, putative [Streptococcus
           pneumoniae CCRI 1974M2]
 gi|147758553|gb|EDK65551.1| hypothetical protein CGSSp14BS69_05177 [Streptococcus pneumoniae
           SP14-BS69]
          Length = 218

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQELHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQELHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|260062631|ref|YP_003195711.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Robiginitalea
           biformata HTCC2501]
 gi|88784198|gb|EAR15368.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Robiginitalea
           biformata HTCC2501]
          Length = 640

 Score = 74.6 bits (182), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 6/108 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIK 291
               P  +   ++S K+ G V V+D   +  GIIT+ D+           +     +M  
Sbjct: 182 SPDTPASEIARLMSSKKVGSVLVLDA-GRPVGIITDKDLRNQVATGNFPISAPARSIMSA 240

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
                     LT A   + +++IS L + +D     + +G++   DL+
Sbjct: 241 PVITYPPKLSLTQAQLAMMKNDISHLCLTEDGTPDSQVVGVLSKYDLV 288



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           KN      DT  +   +L+    +  ++V+D   + +GI+   DL
Sbjct: 176 KNVVSSSPDTPASEIARLMSSKKVGSVLVLD-AGRPVGIITDKDL 219


>gi|307595386|ref|YP_003901703.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550587|gb|ADN50652.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 385

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 52/126 (41%), Gaps = 3/126 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L       + V  +      +     L+ A++ +   R   + VVD    L GI+T   I
Sbjct: 57  LERRVSLRAKVSSAMSPPYSISQDSDLVKAMSKVLTLRVRALPVVDSSMSLVGILTREKI 116

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +    ++ L   SV  VM K    I  +  +  A  L+ +H I+ L V+D   K  GIV
Sbjct: 117 LKYLLDNRMLPRTSVSSVMSKPAITIDANEAVARAKWLMIRHGITRLPVLD-SGKLYGIV 175

Query: 331 HFLDLL 336
              D++
Sbjct: 176 SMRDIV 181



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + + + K    +   I+ + + +   V V++E  KL G+++  D+     +      V
Sbjct: 10  MDNVVVIAKPKDIISKVISDMRDYKAWVVPVINENGKLVGVLSYRDLLER--RVSLRAKV 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              M   P  I +D+ L  AM  +    +  L VVD     +GI+    +L++
Sbjct: 68  SSAMSP-PYSISQDSDLVKAMSKVLTLRVRALPVVDSSMSLVGILTREKILKY 119



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/140 (15%), Positives = 43/140 (30%), Gaps = 19/140 (13%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +    S           +     +  A  ++       + V+D   KL GI++  DI  
Sbjct: 124 RMLPRTSVSSVMSKPAITIDANEAVARAKWLMIRHGITRLPVLD-SGKLYGIVSMRDIVE 182

Query: 275 NF-----------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                                D+    V+ +       + E   +   + L+    IS +
Sbjct: 183 RLYYASIPRRSRRGDVVGTEDDILAAPVKAIATTPAVTVNETDDVYTVVNLMLDKGISGM 242

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+   +   G+V   D++R
Sbjct: 243 PVI-SGESVTGVVSSYDVIR 261



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 285 VEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V ++M  N  VI     +++  +  +R +   V+ V+++  K +G++ + DLL   +
Sbjct: 6   VSELM-DNVVVIAKPKDIISKVISDMRDYKAWVVPVINENGKLVGVLSYRDLLERRV 61


>gi|308187162|ref|YP_003931293.1| Bifunctional protein glk [Pantoea vagans C9-1]
 gi|308057672|gb|ADO09844.1| Bifunctional protein glk [Pantoea vagans C9-1]
          Length = 308

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 58/162 (35%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L+ L+       S Q   AV  +     ++   G+G S  +     +       P  + 
Sbjct: 102 ALAGLQRVRDQLNSTQLQQAVTLLAQAD-KLAFFGLGASAVVAHDAFTKFLRFNLPVIWS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+ +++S +G +  +  +   AR     +IAITS   S +A  A
Sbjct: 161 DDIVIQRMSCINSRAGDVFVLISHTGRTKNMVELARLARVNGSTVIAITS-PDSPLAHEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            I L L    ++  +   P  S + QL + D LA      R 
Sbjct: 220 AIALVLDVPEDTDVY--LPMVSRLAQLTVIDVLATGFTLERG 259


>gi|239904848|ref|YP_002951586.1| hypothetical protein DMR_02090 [Desulfovibrio magneticus RS-1]
 gi|239794711|dbj|BAH73700.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 129

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 1/115 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +K    L DA+  + E     + V+D   +L G++T+ D+    HK      +
Sbjct: 7   MTSQLRCLKETDSLADAVAAMQELFIRHIPVLDADGRLAGLVTQRDVLALEHKKDPGTPL 66

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            D+M  +   +  DT L  A + +  H    L VV      +GI+   D L+  I
Sbjct: 67  RDIMRSDVATVAPDTPLRTAAETMIFHKYGCLPVV-AAGNLVGIITETDFLKLAI 120



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M    + + E   L  A+  +++  I  + V+D   +  G+V   D+L
Sbjct: 3   VADLMTSQLRCLKETDSLADAVAAMQELFIRHIPVLDADGRLAGLVTQRDVL 54


>gi|225181720|ref|ZP_03735159.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
 gi|225167591|gb|EEG76403.1| CBS domain containing membrane protein [Dethiobacter alkaliphilus
           AHT 1]
          Length = 153

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 53/136 (38%), Gaps = 28/136 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +  +     L + I ++ E+    + V+DE   L GI++E D+ R   K       
Sbjct: 7   MTTDLVTIAEDKTLREVIKLMVEQNISGIPVIDETGNLMGIVSESDVIRLKRKTHMPDYI 66

Query: 282 -----------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                   + V+D M K    + EDT L    +L+ +HNI+ + 
Sbjct: 67  QLLEAMLNEAQPEQFSADVIRSLNMPVKDFMTKKVVTVKEDTTLAEITRLMVEHNINRIP 126

Query: 319 VVDDCQKAIGIVHFLD 334
           VV   QK +GIV   D
Sbjct: 127 VVRK-QKLLGIVTRRD 141



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 31/57 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  +++M  +   I ED  L   ++L+ + NIS + V+D+    +GIV   D++R  
Sbjct: 1   MKAKEIMTTDLVTIAEDKTLREVIKLMVEQNISGIPVIDETGNLMGIVSESDVIRLK 57


>gi|195953545|ref|YP_002121835.1| diguanylate cyclase with PAS/PAC sensor [Hydrogenobaculum sp.
           Y04AAS1]
 gi|195933157|gb|ACG57857.1| diguanylate cyclase with PAS/PAC sensor [Hydrogenobaculum sp.
           Y04AAS1]
          Length = 916

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 12/167 (7%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI---PL 232
               ++ L+  D L++AL            +L P     + F       + G  +    L
Sbjct: 142 RQRDLISLSPTDTLSLALKTLVENKIRAVVILEPNKTNSSEFDENEQDTNDGKLVDRGRL 201

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           V  G  L+D   ++S  R      VD   +L GIIT+ D+ +  +   DL+   ++D M 
Sbjct: 202 VSRG-RLVDRGRLVSRGRL-----VDR-GRLVGIITQKDLTKLISVGVDLDKALIKDYMK 254

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                   DT L  A +++   NI  L+VVD+    IGIV   D++R
Sbjct: 255 SPVITCRMDTPLIEASKMMASFNIRRLVVVDEKDNPIGIVTQGDIIR 301



 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           V+   P   AI +++      V VV E  K  GI++E D+ +  +  +    +V +   K
Sbjct: 20  VEASTPTKYAIQLMANFDKDYVVVV-ENNKTVGILSESDVLKLKYANENLDKNVLEYASK 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +     L  A+ L+ +++IS L+VVDD    IG++    L++
Sbjct: 79  PAITVRSSFNLFEAINLMIENDISKLIVVDDEDTPIGVLTQRTLIK 124



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/116 (14%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K     +  + + ++      V+    L +AI ++ E     + VVD+     G++T+  
Sbjct: 62  KYANENLDKNVLEYASKPAITVRSSFNLFEAINLMIENDISKLIVVDDEDTPIGVLTQRT 121

Query: 272 IFRNFHKDL--NTLSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           + +   +++      V+D++  ++   +     L++A++ L ++ I  +++++  +
Sbjct: 122 LIKTIDQEMLKRHKHVKDILRQRDLISLSPTDTLSLALKTLVENKIRAVVILEPNK 177



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +    +   ++  PLI+A  +++      + VVDE     GI+T+GDI RN 
Sbjct: 252 YMKSPVITCRMDTPLIEASKMMASFNIRRLVVVDEKDNPIGIVTQGDIIRNL 303


>gi|322367842|ref|ZP_08042412.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
 gi|320552549|gb|EFW94193.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
          Length = 133

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 42/113 (37%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--L 283
               +  V     L +A   + E   G + VV +   L+GIIT  D      +       
Sbjct: 10  MSSPVYTVSNDTSLQNAGETMREHEIGSIIVVGDDDHLEGIITATDFIHVVAEGDPDPNA 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V  VM  +         +  A  ++ +H    L V+D  +  IG++   DL 
Sbjct: 70  TVASVMSTDVITTTASESVQTAADIMIEHGFDHLPVLD-GEVVIGVITTTDLT 121



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ + V  +M      +  DT L  A + +R+H I  ++VV D     GI+   D +
Sbjct: 1   MDDVFVGSLMSSPVYTVSNDTSLQNAGETMREHEIGSIIVVGDDDHLEGIITATDFI 57


>gi|311104464|ref|YP_003977317.1| RpiR family transcriptional regulator [Achromobacter xylosoxidans
           A8]
 gi|310759153|gb|ADP14602.1| helix-turn-helix domain, RpiR family protein 2 [Achromobacter
           xylosoxidans A8]
          Length = 277

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 46/174 (26%), Positives = 66/174 (37%), Gaps = 6/174 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K++  Q   +   +  + L   ES L          AVE I+  + RV I GIG S  I 
Sbjct: 86  KDTPEQVVSKIFHSNIQTLQETESVLD---VAALRAAVELIRRAR-RVEIYGIGSSAVIA 141

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                 +   G  +  V  +        +   D  ++ +S SGS+ E       A+    
Sbjct: 142 HDAHYRMLRIGLHATAVTDSHVQAISASLTGPDVAVLTISHSGSTHETVLATRLAKEAGA 201

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
             I IT+  KS +  HAD+VL                TS + QLAI D L   L
Sbjct: 202 RTICITNFGKSPIQEHADVVLHT--MSRETRFRTEAMTSRLAQLAIIDTLIACL 253


>gi|147835092|emb|CAN65681.1| hypothetical protein VITISV_004413 [Vitis vinifera]
          Length = 747

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 30/137 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              +   V     L +A   + +++  CV VVD    L+GI+T GDI R   K       
Sbjct: 583 MSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRYLSKKSKEAPK 642

Query: 279 ------DLNTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                 D+N   V  V           +       DT L  A +L+    I  L VV   
Sbjct: 643 GDSSLPDVNASLVSSVCTRGMSYRGRXRGLLTCYPDTDLASAKELMEAKGIKQLPVVKRG 702

Query: 324 QKA--------IGIVHF 332
            +         + I+H+
Sbjct: 703 GEPKKERKRSIVAILHY 719



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V   M KN   +     L  A + +     + ++VVD      GI+ + D+ R+
Sbjct: 574 LEDLKVSQAMSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRY 632


>gi|120554753|ref|YP_959104.1| DNA-binding transcriptional regulator HexR [Marinobacter aquaeolei
           VT8]
 gi|120324602|gb|ABM18917.1| transcriptional regulator, RpiR family [Marinobacter aquaeolei VT8]
          Length = 290

 Score = 74.2 bits (181), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 59/161 (36%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L+ S Q         A++ +   K ++   G+G S  +             P     
Sbjct: 112 IANLDKSRQSLDHKALASAIDYLIQAK-QIHFFGMGGSASVALDAQHKFFRFNIPVTSYD 170

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A             D+I+++S++G + E   I   AR     +I IT   +S +A    
Sbjct: 171 DALMQRMVAAGAQVGDVIVMISYTGRTKESVDIARVARENGATVIGIT-NPESPLAEFCT 229

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +V  +            P +S I+ L + D LA  +   R 
Sbjct: 230 VV--VGVTTPEDTEVYMPMSSRIIHLTVIDILATGVTLKRG 268


>gi|323498044|ref|ZP_08103051.1| DNA-binding transcriptional regulator HexR [Vibrio sinaloensis DSM
           21326]
 gi|323316892|gb|EGA69896.1| DNA-binding transcriptional regulator HexR [Vibrio sinaloensis DSM
           21326]
          Length = 284

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +D+++++S +G +  L  I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCTDNDVVVLISHTGRTKSLVEIANLARENGATVIAITAK-DSPLDKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSISLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|295700381|ref|YP_003608274.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1002]
 gi|295439594|gb|ADG18763.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1002]
          Length = 287

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 73/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGLPYASTAVARDDDVQTLMDKVGEAAIDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A         +             G++   D+   +
Sbjct: 128 LVSAR-RVFFFGVGSGSGLVAQDAALRFLRIDIAAAAFTDGHLQRLYAGLMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVAAPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|332799070|ref|YP_004460569.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
 gi|332696805|gb|AEE91262.1| CBS domain containing protein [Tepidanaerobacter sp. Re1]
          Length = 210

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 51/146 (34%), Gaps = 12/146 (8%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P   +                  ++K    + DAI  L     G + + D+   L
Sbjct: 59  FAGKDPKNLISEKMNDIKVDKIKSV-PSVIKEDTSVYDAIVTLFLTDVGTLFITDKDGNL 117

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ +    + D++ + +  VM + P    +  +     A + +  H I  L V
Sbjct: 118 AGLVSRKDLLKTAIGNADIHKMPIGIVMTRMPNIITVTPEESAYDAARKIVDHQIDALPV 177

Query: 320 VD-------DCQKAIGIVHFLDLLRF 338
           V        +  K +G V    + + 
Sbjct: 178 VKAVTENDQEKYKIVGKVTKTTITKL 203



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 4/62 (6%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    ++ V    P VI EDT +  A+  L   ++  L + D      G+V   DLL+ 
Sbjct: 74  DIKVDKIKSV----PSVIKEDTSVYDAIVTLFLTDVGTLFITDKDGNLAGLVSRKDLLKT 129

Query: 339 GI 340
            I
Sbjct: 130 AI 131


>gi|170758958|ref|YP_001786467.1| CBS domain-containing protein [Clostridium botulinum A3 str. Loch
           Maree]
 gi|169405947|gb|ACA54358.1| CBS domain protein [Clostridium botulinum A3 str. Loch Maree]
          Length = 126

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               + ++     +   + +++E       V DE   L G+I + DI+R        +T 
Sbjct: 6   MNTHVIVLNPKDSIKKVLNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM K      E+  +    + +   +I  + +VD  +K +GIV   D+L+
Sbjct: 66  PVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDSSKKLVGIVSIEDILK 119



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M  +  V+     +   + L+ ++NI+   V D+    IG++   D+ RF
Sbjct: 4   DIMNTHVIVLNPKDSIKKVLNLMNENNINGAPVADEEGNLIGMIVKADIYRF 55


>gi|116512082|ref|YP_809298.1| transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
 gi|116107736|gb|ABJ72876.1| Transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
          Length = 273

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 1/136 (0%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   +  L  +       QF  + + I      + I G+G SG+    L +     G 
Sbjct: 91  ENENSIIEILHETKSKLDLEQFEKSSKLISEASA-IYIFGVGLSGNTAKDLEAMFLRIGV 149

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P   +  +        ++ + DLII +S SG + EL   +  A+     +I ITS + S 
Sbjct: 150 PVKAISGSHFQLQTAALLKKTDLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSP 209

Query: 152 VACHADIVLTLPKEPE 167
           +A  +DI L    E  
Sbjct: 210 LAQLSDINLQTVNEEF 225


>gi|323443473|gb|EGB01089.1| hypothetical protein SAO46_0698 [Staphylococcus aureus O46]
          Length = 266

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/199 (17%), Positives = 81/199 (40%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  L E+ N S
Sbjct: 234 TLFLIDIVSYHLSENTNLS 252


>gi|296090045|emb|CBI39864.3| unnamed protein product [Vitis vinifera]
          Length = 747

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 30/137 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              +   V     L +A   + +++  CV VVD    L+GI+T GDI R   K       
Sbjct: 583 MSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRYLSKKSKEAPK 642

Query: 279 ------DLNTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                 D+N   V  V           +       DT L  A +L+    I  L VV   
Sbjct: 643 GDSSLPDVNASLVSSVCTRGMSYRGRARGLLTCYPDTDLASAKELMEAKGIKQLPVVKRG 702

Query: 324 QKA--------IGIVHF 332
            +         + I+H+
Sbjct: 703 GEPKKERKRSIVAILHY 719



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V   M KN   +     L  A + +     + ++VVD      GI+ + D+ R+
Sbjct: 574 LEDLKVSQAMSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRY 632


>gi|14520560|ref|NP_126035.1| hypothetical protein PAB2118 [Pyrococcus abyssi GE5]
 gi|5457776|emb|CAB49266.1| Hypothetical protein, containing CBS domains [Pyrococcus abyssi
           GE5]
          Length = 282

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 50/143 (34%), Gaps = 32/143 (22%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------ 274
              + +V  G PL  A+  L       + VVD+  +L GII E D+ R            
Sbjct: 133 QRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLRDSEIVRIMKSTE 192

Query: 275 --------------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                                F   L    VE++M K+  V      +    + + ++ I
Sbjct: 193 LAASSEEEWILESHPTLLFEKFELQLPNKPVEEIMTKDVIVATPHMTVYEVAKKMVKYRI 252

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L V+      +G++   DLL+
Sbjct: 253 EQLPVIKGEGDLVGLIRDFDLLK 275



 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ I  + +     VV+   KL GII+   I R    + +   +  ++ ++   + E+  
Sbjct: 23  ALDIFKKHKVRSFPVVNREGKLVGIIS---IKRVLT-NPDEEQLAMLVKRDVPTVKENDD 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  A +L+ +H+   ++VVD+  K +GI+   D++R
Sbjct: 79  LKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVR 114



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 54/114 (47%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
              +P VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    +
Sbjct: 67  KRDVPTVKENDDLKKAARLMLEHDYRRVVVVDNEGKPVGILTVGDIVRRYLAKTEKYKEV 126

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +E    ++  ++ + T L  A++ L   N   L VVDD  + IGI+   DLLR
Sbjct: 127 EIEPYYQRHVSIVWKGTPLKAALKALLLSNAMALPVVDDNGELIGIIDETDLLR 180



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + V+ +M  NP  I        A+ + ++H +    VV+   K +GI+   
Sbjct: 1   MKVKTIMTPNPVTITLPATRNYALDIFKKHKVRSFPVVNREGKLVGIISIK 51


>gi|150017060|ref|YP_001309314.1| RpiR family transcriptional regulator [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903525|gb|ABR34358.1| transcriptional regulator, RpiR family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 282

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/189 (19%), Positives = 68/189 (35%), Gaps = 6/189 (3%)

Query: 6   SHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG 65
           ++F + +      + ++ +  A +   +  + L++ +  L          A E I     
Sbjct: 77  NNFSTTSIHEKIEIDDNELTMAQKVFDSNIKTLTNTKKILG---LDDLKKAAEIISNS-N 132

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            +   G+G SG +          +               +  ++T  D  I +S +G S 
Sbjct: 133 LLYFFGVGGSGILAEDAYHKFLRSPAHVRHSTDYHIQLMEASLLTPQDCAICISHTGKSK 192

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E   I    +     +I ITS   S +A   D+V       E         +S I QL+I
Sbjct: 193 ETIRIAEIVKEAGAKVIVITSHASSPLAKIGDVVFI--SISEEIEFHSEALSSRISQLSI 250

Query: 186 GDALAIALL 194
            D+L + L+
Sbjct: 251 LDSLYVILM 259


>gi|332978778|gb|EGK15468.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter sp.
           1501(2011)]
          Length = 490

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 61/173 (35%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AI + +          ++H    +    +    V      +  
Sbjct: 41  NLPIISAAMDTVTESEMAITMAQLGGLG-----IVHKNMDIDRQAMQVRRVKKFEAGTVV 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + I  E     V VV+ G  ++ GI+T  D+   F  + +   V +
Sbjct: 96  DPITVTPDITVGELLRITHENNISGVPVVEAGSGQVVGIVTHRDVR--FETN-HNQPVSN 152

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM        + E        +LL +H I  ++VVDD     G++   D  + 
Sbjct: 153 VMTPQDKLVTVKEGESNERIKKLLHEHRIEKVLVVDDNFGLKGMITVNDFNKA 205


>gi|315186941|gb|EFU20699.1| putative signal transduction protein with CBS domains [Spirochaeta
           thermophila DSM 6578]
          Length = 319

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 1/128 (0%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  +L  L             +        L      + E R   V VV +  +L GI++
Sbjct: 10  PSPRLLELIYTLKVRDVMTRELITATPDESLRSIQHKMKENRITGVPVV-QKNRLVGIVS 68

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     K          M +N  V+ ED  L  A+  L +++     V+D     +G
Sbjct: 69  IDDIITALDKGYIDEPAGSYMTRNVVVLEEDMPLRFAISYLDKYHYGRFPVLDKKGSLVG 128

Query: 329 IVHFLDLL 336
           IV   D++
Sbjct: 129 IVTSRDII 136



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/64 (23%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              + + TL V DVM +       D  L      ++++ I+ + VV    + +GIV   D
Sbjct: 13  RLLELIYTLKVRDVMTRELITATPDESLRSIQHKMKENRITGVPVV-QKNRLVGIVSIDD 71

Query: 335 LLRF 338
           ++  
Sbjct: 72  IITA 75


>gi|93005268|ref|YP_579705.1| signal-transduction protein [Psychrobacter cryohalolentis K5]
 gi|92392946|gb|ABE74221.1| putative signal-transduction protein with CBS domains
           [Psychrobacter cryohalolentis K5]
          Length = 647

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/155 (18%), Positives = 57/155 (36%), Gaps = 11/155 (7%)

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRF 251
           AL       + D        ++  + +    +  +   + +V     L  A   ++E   
Sbjct: 149 ALQLRHGGKKLDATSYDDPQEVQQIMLQ-PVIDITLLPVHIVDADDSLYQAARTMTEAGL 207

Query: 252 GCVAV--------VDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMIKNPKVILEDTL 301
             V +         +   +  GI+++ DI R      NT     ++    N + I  D  
Sbjct: 208 KHVLIRPPGHLQDKNSSDRTLGILSDNDICRAVSDQQNTVTTPCQNYASFNLRTINADNE 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  A+  + ++ I  L V+D   K IG++   D+L
Sbjct: 268 IGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGDML 302



 Score = 43.0 bits (100), Expect = 0.063,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 30/62 (48%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           ++  ++  +     + DA+  ++  R   + V+D   K+ G++ +GD+  +       +S
Sbjct: 254 YASFNLRTINADNEIGDALLTMTRYRIHRLPVIDTNGKVIGVLAQGDMLAHIGHHSQLIS 313

Query: 285 VE 286
           ++
Sbjct: 314 IQ 315


>gi|295688499|ref|YP_003592192.1| putative signal transduction protein [Caulobacter segnis ATCC
           21756]
 gi|295430402|gb|ADG09574.1| putative signal transduction protein with CBS domains [Caulobacter
           segnis ATCC 21756]
          Length = 143

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 44/110 (40%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
                +  A  +L  +R G + VVDE + + GI++E DI R   K+     T  +   M 
Sbjct: 18  SPQETVGAAAALLHTRRVGAMVVVDETEAVVGILSERDIVRVIAKEGAAALTKPISSCMS 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                      +   ++ +    I  L VV    +  GI+   DL++  I
Sbjct: 78  AKVIFAEPHETVDALLERMTDRRIRHLPVV-KGGRLAGIISIGDLVKHKI 126



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  +  A  LL    +  ++VVD+ +  +GI+   D++R
Sbjct: 16  TASPQETVGAAAALLHTRRVGAMVVVDETEAVVGILSERDIVR 58


>gi|253989924|ref|YP_003041280.1| DNA-binding transcriptional regulator HexR [Photorhabdus
           asymbiotica subsp. asymbiotica ATCC 43949]
 gi|211638238|emb|CAR66862.1| hex regulon repressor [Photorhabdus asymbiotica subsp. asymbiotica
           ATCC 43949]
 gi|253781374|emb|CAQ84536.1| hex regulon repressor [Photorhabdus asymbiotica]
          Length = 286

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 5/164 (3%)

Query: 36  RGLSSLESSLQGELSF-QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
             + +   +++  L     + AV+ +   + ++   G+G S  +     +       P  
Sbjct: 100 ESVMATLDTVKSNLDITAINRAVDLLTQAR-KISFFGLGASAAVAHDAMNKFFRFNIPVI 158

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +              T  D+++++S +G +  L      AR+    +IAITS   S +AC
Sbjct: 159 YFDDIVMQRMSCINSTEGDVVVLISHTGRTKSLVEAAQLARQNDATVIAITSR-NSPLAC 217

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            A + + L    ++  +   P  S I QL + D LA      R 
Sbjct: 218 EATLSILLDVPEDTDIY--MPMVSRIAQLTVIDVLATGFTLRRG 259


>gi|72161714|ref|YP_289371.1| hypothetical protein Tfu_1310 [Thermobifida fusca YX]
 gi|71915446|gb|AAZ55348.1| CBS [Thermobifida fusca YX]
          Length = 213

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 42/96 (43%), Gaps = 11/96 (11%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHK----------DLNTLSVE-DVMIKNPKVILEDTL 301
            + V+D  Q++ G+++E D+                D+    V  D+M      I E   
Sbjct: 36  ALPVLDADQRVVGVVSESDLLAWLAAPNLDEAVFAGDMPEEPVARDLMSTPAITITEGAS 95

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              A + +R+H I  L VV +  K +GIV   DLLR
Sbjct: 96  PREAAERMRRHRIKRLPVVTEDGKLLGIVSRSDLLR 131



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 6/56 (10%)

Query: 284 SVEDVMIKNPKVILEDT---LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D+M  +     E+     L V++++   + +S L V+D  Q+ +G+V   DLL
Sbjct: 4   TVGDLMTTHVVAAFEEAGFKRLAVSLRM---NGVSALPVLDADQRVVGVVSESDLL 56



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 31/86 (36%), Gaps = 8/86 (9%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           +A L + N  E  F    P   +    +    +         +  G    +A   +   R
Sbjct: 56  LAWLAAPNLDEAVFAGDMPEEPVARDLMSTPAIT--------ITEGASPREAAERMRRHR 107

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNF 276
              + VV E  KL GI++  D+ R +
Sbjct: 108 IKRLPVVTEDGKLLGIVSRSDLLRVY 133


>gi|297618499|ref|YP_003703658.1| hypothetical protein Slip_2357 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297146336|gb|ADI03093.1| CBS domain containing membrane protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 216

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 55/128 (42%), Gaps = 16/128 (12%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---------- 274
               +  ++ +   + +A+ ++ +     + V++   KL GI+TE D+            
Sbjct: 6   KMTPNPIVIALDTTVAEAMQLMRDHSIRRLPVMNR-GKLVGIVTERDLSEVSPSPATSLS 64

Query: 275 --NFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +  L    ++D++ KN     +  DT +  A +L+R H +  + V+ +  K +GI+
Sbjct: 65  VFEINYLLAKTKIKDILPKNSQVITVSPDTFIEEAARLMRAHKVGGIPVM-ENGKLVGII 123

Query: 331 HFLDLLRF 338
              ++   
Sbjct: 124 TETNIFDA 131



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+D M  NP VI  DT +  AMQL+R H+I  L V+ +  K +GIV   DL
Sbjct: 1   MKVKDKMTPNPIVIALDTTVAEAMQLMRDHSIRRLPVM-NRGKLVGIVTERDL 52



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 26/60 (43%), Gaps = 1/60 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                D++     +  V     + +A  ++   + G + V+ E  KL GIITE +IF   
Sbjct: 74  KTKIKDILPKNSQVITVSPDTFIEEAARLMRAHKVGGIPVM-ENGKLVGIITETNIFDAL 132


>gi|326781239|ref|ZP_08240504.1| CBS domain containing membrane protein [Streptomyces cf. griseus
           XylebKG-1]
 gi|326661572|gb|EGE46418.1| CBS domain containing membrane protein [Streptomyces cf. griseus
           XylebKG-1]
          Length = 207

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 48/127 (37%), Gaps = 15/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              +   V         + ++SE +   + V+    ++ G+++E D+             
Sbjct: 12  MSHTPVAVGSHASYRQVVELMSESKVSALPVLAGEGRVVGVVSEADLLPKEAFREGGPPA 71

Query: 276 ---FHKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                +     +V  ED+M      +  D  +  A +++ + ++  L VV+      G+V
Sbjct: 72  AAQLDEAFKAAAVLVEDLMSSPAVTVHPDAPIAEAARIMARKHVKRLPVVNSEGLLEGVV 131

Query: 331 HFLDLLR 337
              DLL+
Sbjct: 132 SRGDLLK 138



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 25/53 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM   P  +         ++L+ +  +S L V+    + +G+V   DLL
Sbjct: 7   TVSDVMSHTPVAVGSHASYRQVVELMSESKVSALPVLAGEGRVVGVVSEADLL 59



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V    P+ +A  I++ K    + VV+    L+G+++ GD+ + F +    L  
Sbjct: 90  MSSPAVTVHPDAPIAEAARIMARKHVKRLPVVNSEGLLEGVVSRGDLLKVFLRPDEDLLA 149

Query: 286 E 286
           E
Sbjct: 150 E 150


>gi|329929457|ref|ZP_08283191.1| SIS domain protein [Paenibacillus sp. HGF5]
 gi|328936345|gb|EGG32792.1| SIS domain protein [Paenibacillus sp. HGF5]
          Length = 299

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 53/141 (37%), Gaps = 3/141 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
            H   E IK+   R+ I GIG SG    ++   L   G     +  +     +  ++  +
Sbjct: 138 LHRLAEAIKSAA-RIYIYGIGSSGLSAKEMMLRLLRMGFNVQSITDSHLMLINSSIVNEN 196

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D +I +S SG +  +      A+     +I +TS ++S +A   D  + +          
Sbjct: 197 DFVIAISSSGETSVIVDATRIAKNNGCKVICLTSFSESTLAQQVDSFILVSNTLFVDKER 256

Query: 173 LAPTTSAIMQLAIGDALAIAL 193
                S    +   D L + L
Sbjct: 257 FV--NSQFSVMYAIDILCMIL 275


>gi|134076380|emb|CAK39633.1| unnamed protein product [Aspergillus niger]
          Length = 533

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P           P  S+ M       +AI +            V+H       
Sbjct: 55  SDVTLDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCAPEE 107

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V            ++     + +A  + ++  FG   V + G    KL GI+T
Sbjct: 108 QAEMVRKVKRYENGFISDPVVLSPKATVREAKELKAKWGFGGFPVTENGTLRSKLVGIVT 167

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH DL+  SV  +M  +       T L  A ++LR      L +VD+    + 
Sbjct: 168 SRDI--QFHHDLDD-SVTAIMSTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDENGNLVS 224

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 225 LLSRSDLMK 233



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VDE   L  +++  D+ +N H
Sbjct: 193 PAGTTLAEANEVLRSSKKGKLPIVDENGNLVSLLSRSDLMKNLH 236


>gi|15607061|ref|NP_214443.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
 gi|2984323|gb|AAC07845.1| hypothetical protein aq_2107 [Aquifex aeolicus VF5]
          Length = 619

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/199 (18%), Positives = 71/199 (35%), Gaps = 19/199 (9%)

Query: 144 ITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR-NFS 200
           IT    S  A     V+   +PKE         P        ++   +A      + N  
Sbjct: 84  ITDSPPSSTAVAETDVILYLIPKEVFKQLMEKYPEFRNYFTTSLAKRIAHTAERVKENGG 143

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F             +           +P +     + +A+  + E    C  V  E 
Sbjct: 144 AKTFEKF----------LTVQVKDLKLRKVPFILPSESVYEAVKKMVEDNSSCAIVKSED 193

Query: 261 QKLKGIITEGD-IFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           ++  GIITE D + +  ++DLN   + V++VM      +     L   +  + ++NI   
Sbjct: 194 EE--GIITERDVLKKVIYRDLNPKEVKVKEVMTSPLISVEPTDFLFDVLLTMSKNNIRR- 250

Query: 318 MVVDDCQKAIGIVHFLDLL 336
           +VV +    +G++   D++
Sbjct: 251 VVVKEDGNILGVLEDKDII 269


>gi|323440003|gb|EGA97718.1| transcriptional regulator [Staphylococcus aureus O11]
 gi|323443726|gb|EGB01339.1| transcriptional regulator [Staphylococcus aureus O46]
          Length = 290

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 78/193 (40%), Gaps = 12/193 (6%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           ++      K+ +     LM N + +     +     R L+   + L           +++
Sbjct: 69  INISKYVPKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELND-------KTIDQ 121

Query: 60  IKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           I     R   + I G G S  + + L   L+  G     V         L     +D++I
Sbjct: 122 ICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDIVI 181

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +++ +G+  E+++++     + IP+I ITS   + VA  ++IVLT  K  +     +  T
Sbjct: 182 LITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGK-TDENEMHMGAT 240

Query: 177 TSAIMQLAIGDAL 189
           TS   Q+   D L
Sbjct: 241 TSLFAQMFTIDIL 253


>gi|28898676|ref|NP_798281.1| hypothetical protein VP1902 [Vibrio parahaemolyticus RIMD 2210633]
 gi|260364891|ref|ZP_05777462.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|260898817|ref|ZP_05907258.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28806894|dbj|BAC60165.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308086670|gb|EFO36365.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308111605|gb|EFO49145.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|328474759|gb|EGF45564.1| hypothetical protein VP10329_18690 [Vibrio parahaemolyticus 10329]
          Length = 629

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEGDI-FRNFHKDL 280
           P +  G  +  A  ++++     + +VD    L          GIIT+ D+  R   + L
Sbjct: 161 PTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 221 SPQDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 278



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---------QKAI 327
             DL T  V+ ++  +   I     +  A QL+ Q NIS L++VD              +
Sbjct: 144 ANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVL 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|317029557|ref|XP_001391892.2| Inosine-5'-monophosphate dehydrogenase [Aspergillus niger CBS
           513.88]
          Length = 545

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P           P  S+ M       +AI +            V+H       
Sbjct: 67  SDVTLDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCAPEE 119

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V            ++     + +A  + ++  FG   V + G    KL GI+T
Sbjct: 120 QAEMVRKVKRYENGFISDPVVLSPKATVREAKELKAKWGFGGFPVTENGTLRSKLVGIVT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH DL+  SV  +M  +       T L  A ++LR      L +VD+    + 
Sbjct: 180 SRDI--QFHHDLDD-SVTAIMSTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDENGNLVS 236

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 237 LLSRSDLMK 245



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VDE   L  +++  D+ +N H
Sbjct: 205 PAGTTLAEANEVLRSSKKGKLPIVDENGNLVSLLSRSDLMKNLH 248


>gi|312126707|ref|YP_003991581.1| putative signal transduction protein with cbs domains
           [Caldicellulosiruptor hydrothermalis 108]
 gi|311776726|gb|ADQ06212.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor hydrothermalis 108]
          Length = 123

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKYALEQMQKRKKSVAVVVDENDFLKGIIVKADIYRFLSQPGHFETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLRQH+IS + V+D+  K +G+V   D++
Sbjct: 75  VITADKNDDIKDVAKLLRQHDISAVPVLDN-GKVVGLVGLEDIV 117


>gi|284043348|ref|YP_003393688.1| CBS domain containing membrane protein [Conexibacter woesei DSM
           14684]
 gi|283947569|gb|ADB50313.1| CBS domain containing membrane protein [Conexibacter woesei DSM
           14684]
          Length = 153

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 30/142 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------FRNF 276
                  V     +   + +L       V VV+ G +  GI+TE D+             
Sbjct: 8   MERDPITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLVMVDEEEDLRLPL 67

Query: 277 HKDLN--------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           H DL                       +V D+M ++P  +  DT +  A +++ +   + 
Sbjct: 68  HIDLFGAQIFLGPVKRFEERFRKAIAATVGDMMTEDPITVDADTDVKEAARIIAERRHNR 127

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           L VV +  + +G+V  LD+L  
Sbjct: 128 LPVV-EHGRLVGVVTRLDVLEA 148



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 30/53 (56%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D+M ++P  +  +  +   +++LR H +  + VV+   + +GIV   DL+
Sbjct: 3   TVADIMERDPITVSPEDSVETLLKVLRTHELPGVPVVNGGGRPVGIVTEADLV 55



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +    V     + +A  I++E+R   + VV E  +L G++T  D+    
Sbjct: 99  MMTEDPITVDADTDVKEAARIIAERRHNRLPVV-EHGRLVGVVTRLDVLEAL 149


>gi|268325548|emb|CBH39136.1| conserved hypothetical protein containing CBS domain pair
           [uncultured archaeon]
          Length = 139

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     L    +++SE       VV++  K  G+I+  D+FR   +D N++ V
Sbjct: 24  MEPEVITITEDASLEQLFSLISEYHHLGYPVVNKENKTTGVISYKDLFRVKREDWNSVRV 83

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ M      +     +  A++ + +  I  L+V+DD    +GIV    ++  
Sbjct: 84  KERMSTRLVCVSPGDGVIKAVEKMTEEGIGRLLVIDDD-TLVGIVTRSSIMDA 135



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIV 330
            +  +  L   ++  +M      I ED  L     L+ +++   L   VV+   K  G++
Sbjct: 8   RKLLNAHLRDTTIGAIMEPEVITITEDASLEQLFSLISEYH--HLGYPVVNKENKTTGVI 65

Query: 331 HFLDLLRFG 339
            + DL R  
Sbjct: 66  SYKDLFRVK 74



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V  G  +I A+  ++E+  G + V+D+   L GI+T   I     
Sbjct: 79  NSVRVKERMSTRLVCVSPGDGVIKAVEKMTEEGIGRLLVIDDD-TLVGIVTRSSIMDAMG 137


>gi|83589469|ref|YP_429478.1| signal-transduction protein [Moorella thermoacetica ATCC 39073]
 gi|83572383|gb|ABC18935.1| putative signal-transduction protein with CBS domains [Moorella
           thermoacetica ATCC 39073]
          Length = 211

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P   L    +    V        +++ G  + +AI  +  +  G + VVD+   L
Sbjct: 58  FLSSKPSQALVAEEIKKIRVGDIKGLPRVIRAGASVYEAIVSMFLEDVGTLMVVDDEGHL 117

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
           +G+++  D+ +      DL  + V  +M + P       D  +  A + + +H +  L V
Sbjct: 118 EGVVSRKDLLKAAIGGGDLQKMPVSVIMTRMPNIICTTPDEPVLAAARKIIEHEVDALPV 177

Query: 320 V 320
           V
Sbjct: 178 V 178



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 24/48 (50%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P+VI     +  A+  +   ++  LMVVDD     G+V   DLL+  I
Sbjct: 84  PRVIRAGASVYEAIVSMFLEDVGTLMVVDDEGHLEGVVSRKDLLKAAI 131


>gi|307326851|ref|ZP_07606042.1| CBS domain containing membrane protein [Streptomyces violaceusniger
           Tu 4113]
 gi|306887387|gb|EFN18382.1| CBS domain containing membrane protein [Streptomyces violaceusniger
           Tu 4113]
          Length = 221

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/130 (17%), Positives = 50/130 (38%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------F 273
              ++  V    P  + +  L + R   + V++   ++ G+++E D+             
Sbjct: 12  MTHTVVAVGREAPFKEIVRTLEQWRVSALPVLEGEGRVIGVVSEADLLPKEEFRDSDPAR 71

Query: 274 RNFHKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                DL        ++ +++M      +     L  A +++    +  L VVD+  +  
Sbjct: 72  VAQLPDLPGIAKAGAVTADELMTSPAITVHASATLAEAARIMTHKRVKRLPVVDEEGRLE 131

Query: 328 GIVHFLDLLR 337
           GIV   DLL+
Sbjct: 132 GIVSRADLLK 141



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 32/89 (35%), Gaps = 7/89 (7%)

Query: 201 ENDFYVLHPGGKLG-------TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           + +F    P                  +           V     L +A  I++ KR   
Sbjct: 61  KEEFRDSDPARVAQLPDLPGIAKAGAVTADELMTSPAITVHASATLAEAARIMTHKRVKR 120

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           + VVDE  +L+GI++  D+ + F +  + 
Sbjct: 121 LPVVDEEGRLEGIVSRADLLKVFLRPDDD 149



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM      +  +      ++ L Q  +S L V++   + IG+V   DLL
Sbjct: 8   VSDVMTHTVVAVGREAPFKEIVRTLEQWRVSALPVLEGEGRVIGVVSEADLL 59


>gi|222445083|ref|ZP_03607598.1| hypothetical protein METSMIALI_00702 [Methanobrevibacter smithii
           DSM 2375]
 gi|261350350|ref|ZP_05975767.1| CBS-domain-containing protein [Methanobrevibacter smithii DSM 2374]
 gi|222434648|gb|EEE41813.1| hypothetical protein METSMIALI_00702 [Methanobrevibacter smithii
           DSM 2375]
 gi|288861133|gb|EFC93431.1| CBS-domain-containing protein [Methanobrevibacter smithii DSM 2374]
          Length = 129

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
                +++A   L E +   + VVD+  +L GIIT  D+  N   D   L   V+ +MIK
Sbjct: 18  PSNVDVVNAFEELMEHKISAMPVVDD-GELVGIITATDLGHNLILDKYELGTDVKSIMIK 76

Query: 292 NPKVILEDTLLTVAMQLLRQH----NI-SVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +  +  +  A+++++ H    NI + L VV +  K +GI+   D+++ 
Sbjct: 77  DVVTVSPENTIQEAIEIMQSHAPDSNILNQLPVV-ENGKLVGIISDGDIIKL 127



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    V+++M  +      +  +  A + L +H IS + VVDD  + +GI+   DL
Sbjct: 1   MLDKKVKEIMTTDVITTPSNVDVVNAFEELMEHKISAMPVVDD-GELVGIITATDL 55


>gi|162149597|ref|YP_001604058.1| hypothetical protein GDI_3836 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|209544828|ref|YP_002277057.1| CBS domain-containing protein [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161788174|emb|CAP57779.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
 gi|209532505|gb|ACI52442.1| CBS domain containing protein [Gluconacetobacter diazotrophicus PAl
           5]
          Length = 158

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/111 (18%), Positives = 47/111 (42%), Gaps = 3/111 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V+    +     +L+  R G V VVD    + G+++E  I     +   +++ L   D+M
Sbjct: 19  VRPDEAVTAIAHLLTHNRIGAVPVVDGTGHVVGLVSERSIVGALARHGAEIDRLCASDIM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +         +    + + + +   + V+DD    +G+V   D+++  +
Sbjct: 79  THDVPTARRSEDILSVARKMTRSHSRHVPVLDDAGHLVGLVSIGDIVKLRL 129



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 10/45 (22%), Positives = 18/45 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  D  +T    LL  + I  + VVD     +G+V    ++  
Sbjct: 17  ITVRPDEAVTAIAHLLTHNRIGAVPVVDGTGHVVGLVSERSIVGA 61


>gi|158319085|ref|YP_001511592.1| PAS modulated sigma54 specific transcriptional regulator
           [Alkaliphilus oremlandii OhILAs]
 gi|158139284|gb|ABW17596.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family [Alkaliphilus oremlandii OhILAs]
          Length = 585

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/115 (28%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLN 281
               I  +     L  A+ I+ +   G V V++   +L GI+T  DI       F K+  
Sbjct: 15  MDIDIVTITKDATLGQAMQIMLKYNKGDVIVLNNTNELFGILTMTDISIIGGTFFCKNNL 74

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             SVE    +N   I  D     A  L+++  I  L V+ +  K IGIV   D+L
Sbjct: 75  DDSVELYCNQNIVTIGPDEDAIWAKDLMKRKGIGRLPVIRE-NKIIGIVRIKDIL 128



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 33/56 (58%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           LN ++V DVM  +   I +D  L  AMQ++ ++N   ++V+++  +  GI+   D+
Sbjct: 6   LNNMNVSDVMDIDIVTITKDATLGQAMQIMLKYNKGDVIVLNNTNELFGILTMTDI 61


>gi|14600549|ref|NP_147066.1| hypothetical protein APE_0231 [Aeropyrum pernix K1]
 gi|5103623|dbj|BAA79144.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 287

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 51/126 (40%), Gaps = 6/126 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + +  V +    +  V     L  A  ++       + VV EG KL+GIIT  DI     
Sbjct: 1   MASRVVSYMTRDVYTVSPDDTLAHARKLMLTHDISRLPVV-EGSKLRGIITITDIADALV 59

Query: 278 KDLNTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +   +       V +VM ++   I     +  A  L+ +HNI  + VV       GI+  
Sbjct: 60  RKYPSRPANSIYVREVMARDVVTIEGTKSVKTAASLMLKHNIGGVPVVAPDGTLEGIITR 119

Query: 333 LDLLRF 338
            DL R+
Sbjct: 120 TDLTRY 125



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 28/123 (22%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------FRNFHKDLNT 282
            + ++     G V ++D G KL G+IT+ DI                       +KD   
Sbjct: 156 VLKLMEIDATGKVLILD-GGKLVGVITKRDIAFLATPVSVHGAPKYVKIKKPLVYKDRIG 214

Query: 283 LS-------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +        EDVM  NP  +  +  L  A  ++ +  + +L VVD     +G+V  +++
Sbjct: 215 STRVYLVPLAEDVMTPNPITVEPEEDLAKAADIMVKEGVGILPVVDGDN-VLGVVTKVEV 273

Query: 336 LRF 338
           L+ 
Sbjct: 274 LQA 276



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/99 (19%), Positives = 47/99 (47%), Gaps = 2/99 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVI 296
            +  A +++ +   G V VV     L+GIIT  D+ R + + +  ++ V++ M +     
Sbjct: 88  SVKTAASLMLKHNIGGVPVVAPDGTLEGIITRTDLTRYYSEKMKGVNLVKEFMREIYAKA 147

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  +   ++L+       ++++D   K +G++   D+
Sbjct: 148 RREHSIFYVLKLMEIDATGKVLILD-GGKLVGVITKRDI 185


>gi|300865330|ref|ZP_07110141.1| Sensor protein [Oscillatoria sp. PCC 6506]
 gi|300336633|emb|CBN55291.1| Sensor protein [Oscillatoria sp. PCC 6506]
          Length = 778

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/129 (26%), Positives = 54/129 (41%), Gaps = 30/129 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGC--------------------------VAVVDEGQKLKGI 266
           V     LID + ++S+ R  C                            +V EG +L G+
Sbjct: 24  VAPDTYLIDVLALMSQVRSSCELPSWYQFCQLDTIHDPSAIGEARASCVLVMEGLQLLGV 83

Query: 267 ITEGDIFRNFHKD--LNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDD 322
            TE DI R       LN++ + +VM ++   +   +   +  A+ +LRQH I  L +VDD
Sbjct: 84  FTERDIVRLTANGISLNSVRIAEVMTRSVITLKQSDSQDIFTALSILRQHRIRHLPIVDD 143

Query: 323 CQKAIGIVH 331
               +GIV 
Sbjct: 144 RGLLMGIVT 152



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 52/130 (40%), Gaps = 4/130 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   L   G        A  +  S  ++           A++IL + R   + +VD
Sbjct: 84  FTERDIVRLTANGISLNSVRIAEVMTRSVITLKQSDSQDIFT-ALSILRQHRIRHLPIVD 142

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           +   L GI+T   I +         S   V DVM       L+   +    QL+ +H +S
Sbjct: 143 DRGLLMGIVTPESIRQALQPVNLLTSLRYVTDVMTSEVIYALKTASVLNLAQLMARHRVS 202

Query: 316 VLMVVDDCQK 325
            +++V++  +
Sbjct: 203 CIVIVEEKNR 212


>gi|264678542|ref|YP_003278449.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|299530956|ref|ZP_07044369.1| inosine-5'-monophosphate dehydrogenase [Comamonas testosteroni S44]
 gi|262209055|gb|ACY33153.1| chloride channel protein [Comamonas testosteroni CNB-2]
 gi|298720913|gb|EFI61857.1| inosine-5'-monophosphate dehydrogenase [Comamonas testosteroni S44]
          Length = 491

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 65/169 (38%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +  E+      V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLQLSEERGISGFPVCD-GGKVVGIVTSRDLRFETRYDV---KVSQIMT 152

Query: 291 KNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              K+I     + T    A  LL +H +  ++VV+D  +  G++   D+
Sbjct: 153 PREKLITVNEKDGTSPAEAKALLNKHKLERILVVNDAFELKGLITVKDI 201


>gi|218884783|ref|YP_002429165.1| putative signal transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
 gi|218766399|gb|ACL11798.1| putative signal transduction protein with CBS domain
           [Desulfurococcus kamchatkensis 1221n]
          Length = 337

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 52/117 (44%), Gaps = 14/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------------KD 279
           + I   L  A+  +S   F  + V   G  + GI+T  DI + F              ++
Sbjct: 211 ISINSTLGKALETMSTYGFRRLPVT-SGNTVVGILTAMDIVKYFGSHRVYGDTSTGDIRE 269

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++  +ED+M  +   +  D  L VA+Q +    +S  +VVDD     GI+   D+L
Sbjct: 270 VHSKKIEDLMTSSLVTVKPDDDLAVAIQEMVDKGVSSALVVDDEGVLQGIITERDVL 326



 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 46/104 (44%), Gaps = 2/104 (1%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVEDVMIKNPK 294
              LI+ +  +     G + +++    + GIITE D+ +  +  + T L   + M     
Sbjct: 150 DDTLINVLEAMIVHGIGVIPILNRDNTIYGIITEHDLVKYLYGIIKTGLKAREAMSTPVL 209

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  ++ L  A++ +  +    L V       +GI+  +D++++
Sbjct: 210 TISINSTLGKALETMSTYGFRRLPVT-SGNTVVGILTAMDIVKY 252



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 52/135 (38%), Gaps = 20/135 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
           +     +V     +  A+  +S      + V    ++L G++T GD+             
Sbjct: 61  ARREPRIVSPSTVIRRALEEMSTYG-RSLLVSLSDRRLHGLLTLGDLISYLGGGEYFKIV 119

Query: 280 -----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                      L    VE +M KNP  +  D  L   ++ +  H I V+ +++      G
Sbjct: 120 ANRHKYNIYSALEKEIVETIMAKNPISLYVDDTLINVLEAMIVHGIGVIPILNRDNTIYG 179

Query: 329 IVHFLDLLR--FGII 341
           I+   DL++  +GII
Sbjct: 180 IITEHDLVKYLYGII 194



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    L  AI  + +K      VVD+   L+GIITE D+    
Sbjct: 286 VKPDDDLAVAIQEMVDKGVSSALVVDDEGVLQGIITERDVLYAL 329


>gi|170723364|ref|YP_001751052.1| DNA-binding transcriptional regulator HexR [Pseudomonas putida
           W619]
 gi|169761367|gb|ACA74683.1| transcriptional regulator, RpiR family [Pseudomonas putida W619]
          Length = 290

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDSACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAQ 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|325293135|ref|YP_004278999.1| inosine-5`-monophosphate dehydrogenase protein [Agrobacterium sp.
           H13-3]
 gi|325060988|gb|ADY64679.1| putative inosine-5`-monophosphate dehydrogenase protein
           [Agrobacterium sp. H13-3]
          Length = 144

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-- 282
             G ++  V     + +A   L+  + G + V D    + GI TE D+ +    +     
Sbjct: 11  RKGRNVVTVGPSVSIGEAAATLNAHKIGALVVTDADGVVLGIFTERDLVKVVAGEGAASL 70

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             SV   M KN      ++     M+++       + V +D  +  GI+   D+++  I
Sbjct: 71  LQSVSVAMTKNVIRCHHNSTTDELMEIMTGGRFRHIPV-EDDGRLAGIISIGDVVKARI 128


>gi|254512935|ref|ZP_05125001.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221532934|gb|EEE35929.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 116

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 4/101 (3%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILED 299
           + IL +KR G V V D+   L+GI++E DI R   +        SV D+M    K    D
Sbjct: 1   MDILRDKRIGAVVVTDQNGALQGILSERDIVRRMAETPGQTLPQSVADLMTSEVKTCAPD 60

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            LL   ++ +       + V+ D  K  G++   D++ F +
Sbjct: 61  DLLNDVLKTMTDGRFRHMPVLSD-GKLRGVITIGDVVHFRL 100



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               +        L D +  +++ RF  + V+    KL+G+IT GD+
Sbjct: 50  MTSEVKTCAPDDLLNDVLKTMTDGRFRHMPVL-SDGKLRGVITIGDV 95


>gi|171741720|ref|ZP_02917527.1| hypothetical protein BIFDEN_00811 [Bifidobacterium dentium ATCC
           27678]
 gi|283454973|ref|YP_003359537.1| sugar isomerase or sugar amino transferase [Bifidobacterium dentium
           Bd1]
 gi|171277334|gb|EDT44995.1| hypothetical protein BIFDEN_00811 [Bifidobacterium dentium ATCC
           27678]
 gi|283101607|gb|ADB08713.1| sugar isomerase or sugar amino transferase [Bifidobacterium dentium
           Bd1]
          Length = 183

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 69/185 (37%), Gaps = 15/185 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
            L  I+ E +G+      +          A+  I     R+   G G+SG      A  +
Sbjct: 7   VLERIVEEIQGV------IARMDENDLERAMALI-TKGSRIYAAGEGRSGFQARSFAMRM 59

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G  S+ +            +   D+++ +S SG +         A+   + +IA+TS
Sbjct: 60  MHIGYTSYMMGETICP-----SMREGDVLLAISGSGKTRRTVEDAEAAKNLGVRVIAVTS 114

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI---MQLAIGDALAIALLESRNFSEND 203
           ++ S +A  AD V+ +P   +    G     S++         DAL + L    + S+ D
Sbjct: 115 KSDSPLASVADAVIVVPGRVKGESSGSIQLLSSLFDQSVHIALDALCLMLSRRDDVSDAD 174

Query: 204 FYVLH 208
               H
Sbjct: 175 ANANH 179


>gi|21282023|ref|NP_645111.1| hypothetical protein MW0294 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485198|ref|YP_042419.1| hypothetical protein SAS0294 [Staphylococcus aureus subsp. aureus
           MSSA476]
 gi|297209170|ref|ZP_06925569.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300911171|ref|ZP_07128620.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|21203459|dbj|BAB94159.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49243641|emb|CAG42065.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|296886103|gb|EFH25037.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|300887350|gb|EFK82546.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH70]
          Length = 266

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|110634574|ref|YP_674782.1| DNA polymerase III, epsilon subunit [Mesorhizobium sp. BNC1]
 gi|110285558|gb|ABG63617.1| DNA polymerase III, epsilon subunit [Chelativorans sp. BNC1]
          Length = 498

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 64/189 (33%), Gaps = 17/189 (8%)

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF---SENDFYVLHPGGKLGTLF 217
            LP+         A    A +QLA           +  F       F  + P        
Sbjct: 176 LLPRLQAMGIRTFAEAERASLQLAREQDEQAKAGWADPFLRPVPQPFAAIDPF----AYQ 231

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDI 272
               D+M +      V+    L   I +++E+R G V V   G+        GI+TE D+
Sbjct: 232 HRVGDLMATP--PIFVRHETSLRSVIGLMAERRVGSVLVSGAGEVGHPTGAYGILTERDV 289

Query: 273 FRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            R    D   +      ++  +    I        A+  + +  I  L V DD    +G+
Sbjct: 290 LRLLAADGGNVFERLTGELASRPLISIRAQAFAYRAIGRMNRLGIRHLGVHDDDGGLVGV 349

Query: 330 VHFLDLLRF 338
           +   DLLR 
Sbjct: 350 ISARDLLRL 358


>gi|332163006|ref|YP_004299583.1| transcriptional regulator [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|318604123|emb|CBY25621.1| sialic acid utilization regulator, RpiR family [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325667236|gb|ADZ43880.1| transcriptional regulator [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330863696|emb|CBX73798.1| uncharacterized HTH-type transcriptional regulator yfeT [Yersinia
           enterocolitica W22703]
          Length = 286

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   +  I   + RV I GI  
Sbjct: 87  ALHNSISSEDSLMVMAQKLAHEKTASIMETTRKINFSVFQQVISLINTAQ-RVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IVLS++G   +++     A
Sbjct: 146 SGLTAKDLSYKLQKIGIMTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMRIAATVA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESISDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESR 197
           + R
Sbjct: 264 QQR 266


>gi|323342714|ref|ZP_08082946.1| RpiR family phosphosugar-binding transcriptional regulator
           [Erysipelothrix rhusiopathiae ATCC 19414]
 gi|322463826|gb|EFY09020.1| RpiR family phosphosugar-binding transcriptional regulator
           [Erysipelothrix rhusiopathiae ATCC 19414]
          Length = 273

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/166 (18%), Positives = 67/166 (40%), Gaps = 6/166 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +   + ++  E   +    +  +K  + R+ I G+G SG    ++   L   G    
Sbjct: 94  NRVIDRTKKNIDKE---ELERVITALKDAQ-RIFIYGVGSSGLTAMEMTQRLLRMGFNVS 149

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +  +     +  +    DL+I +S SG + E+   +  A+     ++++TS ++S +A 
Sbjct: 150 GITDSHMMLINSTITKEKDLVIGISTSGKTIEVLNAVKTAKNNGSKILSMTSFSESELAH 209

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            +D  +                 S    + + D +++ LLE   +S
Sbjct: 210 ISDYQMF--VYNSLFIDNKRFVNSQFAIMYLVDIISMKLLEDDQYS 253


>gi|237785813|ref|YP_002906518.1| hypothetical protein ckrop_1231 [Corynebacterium kroppenstedtii DSM
           44385]
 gi|237758725|gb|ACR17975.1| hypothetical protein ckrop_1231 [Corynebacterium kroppenstedtii DSM
           44385]
          Length = 637

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 47/272 (17%), Positives = 88/272 (32%), Gaps = 29/272 (10%)

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI--IVLSWSGSSDELKAILYY 133
             +           G  +     ++ SH   G  + DD +  I +  SG+ +        
Sbjct: 27  ARVARNATMLYVKAGEKADAT--SDTSHSHSGGTSADDAMTGIRIVRSGAINCFGERDQL 84

Query: 134 ARRFSIPLI---AITSENK---SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             RF    I    ++ +     S  A    +++ +P E           T+    +    
Sbjct: 85  VDRFGPGEIYPRRVSDKPTQHYSYWAHEDSLLIEIPVEVIESLQNYPEVTTFFGTV---- 140

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
                    R  S N+       G +  +      V        +V     + D  T +S
Sbjct: 141 ------TTRRRSSANELRETSGTGGVADIDALRGTVGEVAVKPVIVSPETTIRDTATKMS 194

Query: 248 EKRFGCVAVV--DEGQ----KLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILED 299
           E+      VV  D+      ++ GI+T+  +      K  + +  VE +M   P V    
Sbjct: 195 ERNLSSAIVVKADDDDHRPSRIVGIVTDATLRSEVLAKGADPSGPVERIMSPKPMVTYAS 254

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             L   M  L +  ++ L V+DD    +G++ 
Sbjct: 255 MPLFEGMLQLTEARVNHLPVIDDDN-VVGVLT 285


>gi|91199836|emb|CAI78192.1| putative 6-phospho-3-hexuloisomerase [Streptomyces ambofaciens ATCC
           23877]
 gi|126347539|emb|CAJ89250.1| putative 6-phospho-3-hexuloisomerase [Streptomyces ambofaciens ATCC
           23877]
          Length = 202

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/194 (19%), Positives = 70/194 (36%), Gaps = 20/194 (10%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKG--RVVITGIGKSGHI 78
           +  +  A R+I+ E   L +               A E ++A+ G  R+++ G G+S   
Sbjct: 19  DGPLAAARRTILREIEALLTRARE---------DQAQELMQAVYGAQRIMVLGAGRSKLA 69

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
               A  L   G  +               I   DL++  S SG +  +      A++  
Sbjct: 70  VDAFAMRLMHLGLTAHVSTDVTCP-----AIAEGDLLVACSGSGHTPTVVQRTEAAKQAG 124

Query: 139 IPLIAITSENKSVVACHADI--VLTLPKEPESCPHGLAPTTSAIMQLA--IGDALAIALL 194
             +  +T+  +S +A  ADI   L    +            +   Q A    D L +AL 
Sbjct: 125 ARIAVVTANQESPLAALADIRVHLAEYSQDFEPDASTQFVGTLFEQGALVFFDCLILALQ 184

Query: 195 ESRNFSENDFYVLH 208
            +++   ++ Y  H
Sbjct: 185 RTQHVDPSEMYARH 198


>gi|24214686|ref|NP_712167.1| inosine-5'-monophosphate dehydrogenase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45657779|ref|YP_001865.1| IMP dehydrogenase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|24195675|gb|AAN49185.1|AE011372_1 inosine-5'-monophosphate dehydrogenase [Leptospira interrogans
           serovar Lai str. 56601]
 gi|45601019|gb|AAS70502.1| IMP dehydrogenase [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
          Length = 508

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 73/175 (41%), Gaps = 18/175 (10%)

Query: 169 CPHGLAPTTSAIM-QLAIGDALA--IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            P   +P  +    Q+AI  AL   I ++   N  E    ++    +    F+    ++ 
Sbjct: 60  RPFISSPMDTVTESQMAIAQALMGGIGIIHYNNTIEEQVALVEKVKRFENGFITDPVILG 119

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNT 282
             + I         +DAI     K F  + V ++     KL GI+T  DI  +F K+   
Sbjct: 120 PKNVIR-------DLDAIKE--RKGFTGIPVTEDGTRNSKLIGIVTNRDI--DFEKN-RE 167

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++++ VM  N     E   L  A +++++  I  L +VD   K + +V   DL +
Sbjct: 168 ITLDKVMTTNLITGKEGITLQDANEIIKKSKIGKLPIVDSQGKLVSLVSRSDLKK 222


>gi|134291741|ref|YP_001115510.1| signal-transduction protein [Burkholderia vietnamiensis G4]
 gi|134134930|gb|ABO59255.1| putative signal-transduction protein with CBS domains [Burkholderia
           vietnamiensis G4]
          Length = 149

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHK---DLNTLSVE 286
               C   +    +     G + V+   +      G++T+ D+         D   ++  
Sbjct: 14  CTAECSAFELADRMRHGHVGDIVVIEYRNGEAIPIGLVTDRDLVVEVMARGDDPADVTAG 73

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGII 341
            +M +   V+ E   + VA++ +R+  I  L VVDD  + +GIV   DL+    G++
Sbjct: 74  QIMSRGLVVVAETDEIGVALEEMRRSGIRRLPVVDDAGRLVGIVTLDDLVEHLAGLL 130



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 7/92 (7%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           G+A+ I L+  R+               G      +        + +V     +  A+  
Sbjct: 43  GEAIPIGLVTDRDLVVEVMAR-------GDDPADVTAGQIMSRGLVVVAETDEIGVALEE 95

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +       + VVD+  +L GI+T  D+  +  
Sbjct: 96  MRRSGIRRLPVVDDAGRLVGIVTLDDLVEHLA 127


>gi|302344172|ref|YP_003808701.1| CBS domain containing membrane protein [Desulfarculus baarsii DSM
           2075]
 gi|301640785|gb|ADK86107.1| CBS domain containing membrane protein [Desulfarculus baarsii DSM
           2075]
          Length = 213

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 13/116 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                  V     L++A  ++ + R   + VVD+  +L G++T   I      +      
Sbjct: 7   MTPDPITVGPETLLMEARELMDDNRIRRLPVVDKKGRLVGMVTLRRILEAMPSEATSLSV 66

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 L+ L V D+M K+P  +  +  +   ++L ++  I    VVD+  + +GI
Sbjct: 67  QERNYLLSRLRVGDIMQKDPVFVSPEDFVMDVIRLGQERGIGAFPVVDN-GRLVGI 121



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V + M  +P  +  +TLL  A +L+  + I  L VVD   + +G+V    +L  
Sbjct: 1   MKVRNWMTPDPITVGPETLLMEARELMDDNRIRRLPVVDKKGRLVGMVTLRRILEA 56


>gi|254414758|ref|ZP_05028523.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
 gi|196178606|gb|EDX73605.1| CBS domain pair protein [Microcoleus chthonoplastes PCC 7420]
          Length = 754

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 5/114 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL- 280
           D+ H    +P +       D +  +++   GCV V+ EG++L G+ TE DI R     L 
Sbjct: 53  DMSHIPAHLPQISCLSQEEDTVFGVADTAAGCVLVM-EGERLVGVFTERDIVRLAAAGLP 111

Query: 281 -NTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + +++ ++M +    +       +  A+ LLRQH I  L +V++  + +GIV 
Sbjct: 112 LSRVNISEIMTRPAITLQPSPSHDIFTALGLLRQHRIRHLPIVNEQGQLMGIVT 165



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 43/199 (21%), Positives = 81/199 (40%), Gaps = 14/199 (7%)

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++ A++   R   +P  A+   + S +  H   +  L +E      G+A T +  + +  
Sbjct: 32  DVLALMSRFRSCRLPTQAL-GTDMSHIPAHLPQISCLSQEE-DTVFGVADTAAGCVLVME 89

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           G+ L         F+E D   L   G L    V  S++M              +  A+ +
Sbjct: 90  GERLVGV------FTERDIVRLAAAG-LPLSRVNISEIMTRPAITLQPSPSHDIFTALGL 142

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----VEDVMIKNPKVILEDTL 301
           L + R   + +V+E  +L GI+T   I +     +N L+    V+DVM          T 
Sbjct: 143 LRQHRIRHLPIVNEQGQLMGIVTHESIRKALQP-VNLLTRLRCVQDVMTTAVIHAPVTTA 201

Query: 302 LTVAMQLLRQHNISVLMVV 320
           +    QL+ +H +S +++ 
Sbjct: 202 VLQLAQLMTEHQVSCVVIT 220



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+TE DI +      DL+ L+ ++VM      +     L +A + ++QH +  L+V  
Sbjct: 262 VGIVTERDIVQFQALELDLSRLNAQEVMSTPLFCLGSSDSLWLAHEQMQQHRVRRLVVRG 321

Query: 322 DCQKAIGIVHFLDLLR 337
           +  + +GIV    LL+
Sbjct: 322 NQGELVGIVSQTSLLQ 337


>gi|182418055|ref|ZP_02949360.1| transcriptional regulator [Clostridium butyricum 5521]
 gi|237665969|ref|ZP_04525957.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378110|gb|EDT75646.1| transcriptional regulator [Clostridium butyricum 5521]
 gi|237658916|gb|EEP56468.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 281

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 72/180 (40%), Gaps = 5/180 (2%)

Query: 22  STVQCALRSIIAEKR-GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
            T       I+      + S+  ++          A++ IK  K  + I GIG+S  IG 
Sbjct: 87  DTEDNIREVIVKTANKNIQSINDTISLLDEHTIEEAIKAIKNAKN-IYIFGIGESALIGL 145

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L      +     +         I+ DD+ I +S+ G + E+ + L   +     
Sbjct: 146 DLQYKLLRIHKNAMISLESHVQLSMSANISNDDIAIGISYLGKTKEVYSALSKCKEKGAK 205

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
            I IT   ++ V+   DI + +P   +    G    +S I+QL + D L + L +  NFS
Sbjct: 206 CITITKFGENPVSSLGDIKIQVPFVEKDLRIGAI--SSRIVQLTVIDILFVGLAKE-NFS 262


>gi|331006672|ref|ZP_08329952.1| Phosphogluconate repressor HexR, RpiR family [gamma proteobacterium
           IMCC1989]
 gi|330419525|gb|EGG93911.1| Phosphogluconate repressor HexR, RpiR family [gamma proteobacterium
           IMCC1989]
          Length = 281

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/180 (18%), Positives = 66/180 (36%), Gaps = 7/180 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
             +ST   + +        L ++  ++  E     H AV  I     R+   G G SG +
Sbjct: 90  DTDSTADFSKKVFDGAIDTLLNVRDNVDIE---HLHQAVTAI-TASSRIEFFGFGASGAV 145

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
            +            +         +     ++  D+++ +S SG +  L      A+   
Sbjct: 146 AADAYHKFFRLQLAAAAHSDHHFQNMSAASLSPGDVVVAISHSGRTKALLDSSQLAKEAG 205

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +I+I     S +A  ADI + +  E +   +   P  S +  L + D LA+ + + + 
Sbjct: 206 ATVISICPS-DSPIADIADIPINVNVEEDIEIY--TPLCSRLAHLVVIDVLAMGVAQQKG 262


>gi|126729413|ref|ZP_01745227.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Sagittula stellata E-37]
 gi|126710403|gb|EBA09455.1| nucleotidyltransferase/CBS/cyclic nucleotide-binding domain protein
           [Sagittula stellata E-37]
          Length = 607

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 20/137 (14%), Positives = 45/137 (32%), Gaps = 4/137 (2%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F               +                  + DA  ++ E+    + +  E   L
Sbjct: 126 FDRGRTARPKRADLSTSRAETLMATRPLTCTPDTTVRDAARMMDERHVSSICIT-EAGML 184

Query: 264 KGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           +GI T  D+  +     L     +  +M   P  +    + +  + ++ +  I  + +  
Sbjct: 185 RGIATIRDMSGKVVGGGLPLDTPIARIMTAAPVTLPPSAIGSDVLHMMMERRIGHVPIT- 243

Query: 322 DCQKAIGIVHFLDLLRF 338
           +  + +G+V   DL RF
Sbjct: 244 EGPRLVGMVTQTDLTRF 260



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 28/70 (40%), Gaps = 1/70 (1%)

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
               G   R    DL+T   E +M   P     DT +  A +++ + ++S + +  +   
Sbjct: 125 FFDRGRTARPKRADLSTSRAETLMATRPLTCTPDTTVRDAARMMDERHVSSICIT-EAGM 183

Query: 326 AIGIVHFLDL 335
             GI    D+
Sbjct: 184 LRGIATIRDM 193


>gi|125624136|ref|YP_001032619.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124492944|emb|CAL97907.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300070910|gb|ADJ60310.1| putative transcriptional regulator [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 273

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/136 (24%), Positives = 54/136 (39%), Gaps = 1/136 (0%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E   +  L  +       QF  + + I      + I G+G SG+    L +     G 
Sbjct: 91  ENENSIIEILHETKSKLDLEQFEKSSKLISEASA-IYIFGVGLSGNTAKDLEAMFLRIGV 149

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P   +  +        ++ + DLII +S SG + EL   +  A+     +I ITS + S 
Sbjct: 150 PVKAISDSHFQLQTADLLKKTDLIIGISLSGKTLELFESIKIAKEQKAQIITITSSDYSP 209

Query: 152 VACHADIVLTLPKEPE 167
           +A  +DI L    E  
Sbjct: 210 LAQLSDINLQTVNEEF 225


>gi|70729700|ref|YP_259439.1| CBS domain-containing protein [Pseudomonas fluorescens Pf-5]
 gi|68343999|gb|AAY91605.1| CBS domain protein [Pseudomonas fluorescens Pf-5]
          Length = 146

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  +     +++A+ +++EK  G + V+ E   + G+I+E D  R      +   
Sbjct: 13  KHNQQVHTIAPHQMVLEALMVMAEKNVGALPVL-ENGVVVGVISERDYARKLVLHGRSSV 71

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              V  +M      +     +   M ++   ++  L VV +  + +G++   DL++  I
Sbjct: 72  GTPVSAIMSSPVITVDSHQSVDTCMNIMTDSHLRHLPVV-ENGQLLGLLSIGDLVKEAI 129


>gi|90422132|ref|YP_530502.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
 gi|90104146|gb|ABD86183.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisB18]
          Length = 348

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 44/146 (30%), Gaps = 29/146 (19%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------ 273
                     +  V            L       V VVD+  +  GI++EGD+       
Sbjct: 20  VKVREVMSTKVVTVGPEDTARSVAQTLLHHGISAVPVVDD-GRPIGIVSEGDLMPRNDAD 78

Query: 274 RNFHKDLN---------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           R   +D                         +  +VM      + ED  L    +LL   
Sbjct: 79  RQAGRDWWLRMLSQGQEQSSDYLEFLNATDRTAREVMTSPVVSVDEDADLVEVAELLSSK 138

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  + V+    K +GIV   DL+R 
Sbjct: 139 RIKRVPVL-RDGKLVGIVSRADLVRA 163



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V     L++   +LS KR   V V+    KL GI++  D+ R F   +     E
Sbjct: 122 VDEDADLVEVAELLSSKRIKRVPVL-RDGKLVGIVSRADLVRAFAHPVPAHQAE 174


>gi|15923307|ref|NP_370841.1| hypothetical protein SAV0317 [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|15926019|ref|NP_373552.1| hypothetical protein SA0306 [Staphylococcus aureus subsp. aureus
           N315]
 gi|49482549|ref|YP_039773.1| hypothetical protein SAR0314 [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|57651241|ref|YP_185206.1| hypothetical protein SACOL0314 [Staphylococcus aureus subsp. aureus
           COL]
 gi|82750017|ref|YP_415758.1| hypothetical protein SAB0254c [Staphylococcus aureus RF122]
 gi|87160496|ref|YP_493031.1| hypothetical protein SAUSA300_0317 [Staphylococcus aureus subsp.
           aureus USA300_FPR3757]
 gi|88194098|ref|YP_498887.1| hypothetical protein SAOUHSC_00297 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148266740|ref|YP_001245683.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150392781|ref|YP_001315456.1| hypothetical protein SaurJH1_0307 [Staphylococcus aureus subsp.
           aureus JH1]
 gi|156978645|ref|YP_001440904.1| hypothetical protein SAHV_0314 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161508587|ref|YP_001574246.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142224|ref|ZP_03566717.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253316582|ref|ZP_04839795.1| hypothetical protein SauraC_10635 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|253730680|ref|ZP_04864845.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|255005111|ref|ZP_05143712.2| hypothetical protein SauraM_01550 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257424461|ref|ZP_05600890.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257427130|ref|ZP_05603532.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257429766|ref|ZP_05606153.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257432412|ref|ZP_05608775.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257435372|ref|ZP_05611423.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257795058|ref|ZP_05644037.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|258413563|ref|ZP_05681838.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|258421313|ref|ZP_05684240.1| sugar isomerase [Staphylococcus aureus A9719]
 gi|258439061|ref|ZP_05690152.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|258444297|ref|ZP_05692631.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|258447176|ref|ZP_05695326.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|258448634|ref|ZP_05696747.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|258453090|ref|ZP_05701083.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|258455871|ref|ZP_05703826.1| sugar isomerase [Staphylococcus aureus A5937]
 gi|262048884|ref|ZP_06021764.1| hypothetical protein SAD30_0730 [Staphylococcus aureus D30]
 gi|262052994|ref|ZP_06025172.1| hypothetical protein SA930_0023 [Staphylococcus aureus 930918-3]
 gi|269201964|ref|YP_003281233.1| hypothetical protein SAAV_0284 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|282893475|ref|ZP_06301708.1| hypothetical protein SGAG_00828 [Staphylococcus aureus A8117]
 gi|282902900|ref|ZP_06310793.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus C160]
 gi|282907300|ref|ZP_06315148.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282907643|ref|ZP_06315485.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282913173|ref|ZP_06320965.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M899]
 gi|282915639|ref|ZP_06323410.1| hypothetical protein SATG_02360 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282921612|ref|ZP_06329330.1| hypothetical protein SASG_01793 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282922288|ref|ZP_06329979.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282922800|ref|ZP_06330490.1| hypothetical protein SARG_00452 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282926427|ref|ZP_06334059.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|283768048|ref|ZP_06340963.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283959751|ref|ZP_06377192.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|284023326|ref|ZP_06377724.1| hypothetical protein Saura13_01934 [Staphylococcus aureus subsp.
           aureus 132]
 gi|293498222|ref|ZP_06666076.1| hypothetical protein SCAG_00795 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|293511816|ref|ZP_06670510.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|293550426|ref|ZP_06673098.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M1015]
 gi|294849964|ref|ZP_06790702.1| hypothetical protein SKAG_02053 [Staphylococcus aureus A9754]
 gi|295405587|ref|ZP_06815397.1| hypothetical protein SMAG_00741 [Staphylococcus aureus A8819]
 gi|295426849|ref|ZP_06819488.1| hypothetical protein SIAG_01007 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|296275063|ref|ZP_06857570.1| hypothetical protein SauraMR_01925 [Staphylococcus aureus subsp.
           aureus MR1]
 gi|297245494|ref|ZP_06929362.1| hypothetical protein SLAG_01590 [Staphylococcus aureus A8796]
 gi|297588939|ref|ZP_06947580.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MN8]
 gi|304380281|ref|ZP_07363001.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|13700232|dbj|BAB41530.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           N315]
 gi|14246085|dbj|BAB56479.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu50]
 gi|49240678|emb|CAG39338.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|57285427|gb|AAW37521.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           COL]
 gi|82655548|emb|CAI79942.1| probable transcription regulator [Staphylococcus aureus RF122]
 gi|87126470|gb|ABD20984.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87201656|gb|ABD29466.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147739809|gb|ABQ48107.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149945233|gb|ABR51169.1| sugar isomerase (SIS) [Staphylococcus aureus subsp. aureus JH1]
 gi|156720780|dbj|BAF77197.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|160367396|gb|ABX28367.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus USA300_TCH1516]
 gi|253725524|gb|EES94253.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|257273479|gb|EEV05581.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           55/2053]
 gi|257276761|gb|EEV08212.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257280247|gb|EEV10834.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257283291|gb|EEV13423.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           E1410]
 gi|257285968|gb|EEV16084.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|257789030|gb|EEV27370.1| transcriptional regulator [Staphylococcus aureus A9781]
 gi|257839810|gb|EEV64279.1| transcriptional regulator [Staphylococcus aureus A9763]
 gi|257842737|gb|EEV67159.1| sugar isomerase [Staphylococcus aureus A9719]
 gi|257847937|gb|EEV71933.1| transcriptional regulator [Staphylococcus aureus A9299]
 gi|257850556|gb|EEV74504.1| transcriptional regulator [Staphylococcus aureus A8115]
 gi|257854189|gb|EEV77142.1| sugar isomerase [Staphylococcus aureus A6300]
 gi|257858265|gb|EEV81153.1| conserved hypothetical protein [Staphylococcus aureus A6224]
 gi|257859300|gb|EEV82155.1| conserved hypothetical protein [Staphylococcus aureus A5948]
 gi|257862083|gb|EEV84856.1| sugar isomerase [Staphylococcus aureus A5937]
 gi|259159120|gb|EEW44186.1| hypothetical protein SA930_0023 [Staphylococcus aureus 930918-3]
 gi|259162956|gb|EEW47518.1| hypothetical protein SAD30_0730 [Staphylococcus aureus D30]
 gi|262074254|gb|ACY10227.1| hypothetical protein SAAV_0284 [Staphylococcus aureus subsp. aureus
           ED98]
 gi|269939837|emb|CBI48206.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TW20]
 gi|282315021|gb|EFB45407.1| hypothetical protein SARG_00452 [Staphylococcus aureus subsp.
           aureus C101]
 gi|282316027|gb|EFB46411.1| hypothetical protein SASG_01793 [Staphylococcus aureus subsp.
           aureus C427]
 gi|282320455|gb|EFB50794.1| hypothetical protein SATG_02360 [Staphylococcus aureus subsp.
           aureus D139]
 gi|282323273|gb|EFB53592.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M899]
 gi|282328548|gb|EFB58819.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330199|gb|EFB59720.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Btn1260]
 gi|282591756|gb|EFB96827.1| conserved hypothetical protein [Staphylococcus aureus A10102]
 gi|282593414|gb|EFB98409.1| conserved hypothetical protein [Staphylococcus aureus A9765]
 gi|282597359|gb|EFC02318.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus C160]
 gi|282764161|gb|EFC04288.1| hypothetical protein SGAG_00828 [Staphylococcus aureus A8117]
 gi|283461927|gb|EFC09011.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283789343|gb|EFC28170.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus A017934/97]
 gi|285816040|gb|ADC36527.1| Sialic acid utilization regulator, RpiR family [Staphylococcus
           aureus 04-02981]
 gi|290919473|gb|EFD96549.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus M1015]
 gi|291097153|gb|EFE27411.1| hypothetical protein SCAG_00795 [Staphylococcus aureus subsp.
           aureus 58-424]
 gi|291465774|gb|EFF08306.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           M809]
 gi|294823098|gb|EFG39529.1| hypothetical protein SKAG_02053 [Staphylococcus aureus A9754]
 gi|294969662|gb|EFG45681.1| hypothetical protein SMAG_00741 [Staphylococcus aureus A8819]
 gi|295129301|gb|EFG58928.1| hypothetical protein SIAG_01007 [Staphylococcus aureus subsp.
           aureus EMRSA16]
 gi|297177480|gb|EFH36731.1| hypothetical protein SLAG_01590 [Staphylococcus aureus A8796]
 gi|297577450|gb|EFH96163.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus MN8]
 gi|298693585|gb|ADI96807.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           ED133]
 gi|302332056|gb|ADL22249.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JKD6159]
 gi|302750188|gb|ADL64365.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus str. JKD6008]
 gi|304341262|gb|EFM07181.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|312828838|emb|CBX33680.1| helix-turn-helix domain, rpiR family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129960|gb|EFT85949.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS03]
 gi|315194772|gb|EFU25161.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS00]
 gi|315197995|gb|EFU28327.1| possible RpiR family transcriptional regulator [Staphylococcus
           aureus subsp. aureus CGS01]
 gi|320139376|gb|EFW31255.1| SIS domain protein [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142927|gb|EFW34723.1| SIS domain protein [Staphylococcus aureus subsp. aureus MRSA177]
 gi|323440306|gb|EGA98020.1| hypothetical protein SAO11_1043 [Staphylococcus aureus O11]
 gi|329313010|gb|AEB87423.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329724299|gb|EGG60812.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21189]
 gi|329725796|gb|EGG62275.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21172]
 gi|329732558|gb|EGG68908.1| SIS domain protein [Staphylococcus aureus subsp. aureus 21193]
          Length = 266

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFIDNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|312196329|ref|YP_004016390.1| signal transduction protein with CBS domains [Frankia sp. EuI1c]
 gi|311227665|gb|ADP80520.1| putative signal transduction protein with CBS domains [Frankia sp.
           EuI1c]
          Length = 230

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL- 280
           +         V     L DA  ++     G + V+D G++L GI+T+ D+  R   + + 
Sbjct: 1   MTIPYQVPVTVSPATTLADAARLMDRAGVGALLVLD-GERLVGIVTDRDLVLRAVARGMP 59

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               V+ VM      +         ++  + H++  L +V    + +G++   DLL   +
Sbjct: 60  RDARVDAVMTSGVVTLPVTAERAEVVRAFQTHSVRRLPLV-AGAEVVGLISLDDLLAEAV 118


>gi|219669235|ref|YP_002459670.1| inosine 5-monophosphate dehydrogenase [Desulfitobacterium hafniense
           DCB-2]
 gi|219539495|gb|ACL21234.1| IMP dehydrogenase [Desulfitobacterium hafniense DCB-2]
          Length = 503

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 21/186 (11%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
            A++ L  P        +S      P  SAIMQ    D +AIAL +           ++ 
Sbjct: 28  PANVSLKTPVVKFKKGEQSSIIMNIPLVSAIMQSVSDDKMAIALAKEGGI-----AFIYG 82

Query: 210 GGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDE---GQK 262
              +       S V +      +    VK    L D + +  +     VAV D+     K
Sbjct: 83  SQTIENQAQMVSRVKNHKAGFVISDSNVKPEDTLADILALKEKTGHSTVAVTDDGTANGK 142

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T  D      +      V + M K  +     E T L  A  ++ +H ++ L ++
Sbjct: 143 LVGLVTSRDYR--VSRMSTDTKVGEFMTKFEDLICADEKTTLKEANDIIWEHKLNSLPLI 200

Query: 321 DDCQKA 326
           D  Q+ 
Sbjct: 201 DKDQRL 206


>gi|330507933|ref|YP_004384361.1| CBS domain-containing protein [Methanosaeta concilii GP-6]
 gi|328928741|gb|AEB68543.1| CBS domain protein [Methanosaeta concilii GP-6]
          Length = 126

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/117 (28%), Positives = 52/117 (44%), Gaps = 7/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDI-FRNFHKDLN- 281
               I  V     ++DAI +++ ++ G V V  E   ++  GI+T   I    F + L+ 
Sbjct: 7   MSYPIVTVPPEAMVLDAIKVMAAQKKGSVLVAKERLLKECLGIVTTSQIFLEVFARGLDP 66

Query: 282 -TLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + V D+M   P   I  D     A +L+ +H I  L V+      +GIV   DLL
Sbjct: 67  ARVKVSDIMTPAPLITIDLDDSTQKAAELMIEHKIRRLPVM-KDGALVGIVTSKDLL 122


>gi|218439644|ref|YP_002377973.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
 gi|218172372|gb|ACK71105.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
          Length = 873

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 25/124 (20%)

Query: 233 VKIGCPLIDAITILSEKRF----------------GCVAVVD-----EGQKLKGIITEGD 271
           V    P+ID I ++ E R                 GC   VD     EG++LKGI TE D
Sbjct: 24  VSPQTPIIDVIALMGEVRHRSCDLINSNLIPSSSSGCCERVDCALIMEGEELKGIFTEQD 83

Query: 272 IFR--NFHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + R      +L+   +  VM +    +   +   +   + LLRQH I  L +V+D  + +
Sbjct: 84  LVRVAAMDINLSETPIARVMTQKVITLTHCQTQTIFTVLSLLRQHKIRHLPIVNDRGELV 143

Query: 328 GIVH 331
           G++ 
Sbjct: 144 GLIS 147



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/177 (17%), Positives = 73/177 (41%), Gaps = 8/177 (4%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            L P++S+     +  AL +   E +  F+E D   +       +    A  +     ++
Sbjct: 51  NLIPSSSSGCCERVDCALIMEGEELKGIFTEQDLVRVAAMDINLSETPIARVMTQKVITL 110

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDV 288
              +        +++L + +   + +V++  +L G+I+   I +       L    V +V
Sbjct: 111 THCQTQTIFT-VLSLLRQHKIRHLPIVNDRGELVGLISASFIRQVLQPSHLLKLWRVSEV 169

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC----QKAIGIVHFLDLLRFGII 341
           M+K      +   +    QL+    IS +++V+       K +GI+   D+++F ++
Sbjct: 170 MVKQVIHAPKTASVLKLAQLMANLRISCVVIVESDLDSVLKPVGIITERDIVQFKLL 226



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 48/127 (37%), Gaps = 13/127 (10%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGI 266
                  V    V+H+            ++    +++  R  CV +V    D   K  GI
Sbjct: 162 KLWRVSEVMVKQVIHA-------PKTASVLKLAQLMANLRISCVVIVESDLDSVLKPVGI 214

Query: 267 ITEGDIF--RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           ITE DI   +    +L  +  + VM      +     L +A Q ++  ++  L+V  +  
Sbjct: 215 ITERDIVQFKLLELNLGQIEAQGVMSHPLFCLKPSDSLWLAQQEMQHRHVRRLVVTGEQG 274

Query: 325 KAIGIVH 331
           +  GIV 
Sbjct: 275 ELQGIVT 281


>gi|78223089|ref|YP_384836.1| CBS domain-containing protein [Geobacter metallireducens GS-15]
 gi|78194344|gb|ABB32111.1| CBS domain containing membrane protein [Geobacter metallireducens
           GS-15]
          Length = 149

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           VK    + +   I ++ R G V VVDE   L GI+TE D+                    
Sbjct: 15  VKRETTIRELAEIFTKHRVGSVPVVDESGNLIGIVTESDLIEQDKSLHIPTVISLFDWVI 74

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                + F K+L  +   +V D+     +++  DT ++    ++    +  L VV + ++
Sbjct: 75  YLESEKKFEKELQKMTGQTVGDLYTDTAEMVTPDTPVSEVADIMSSKKLHALPVV-EGKR 133

Query: 326 AIGIVHFLDLLR 337
            +G+V  +DL+R
Sbjct: 134 LVGMVSRIDLIR 145



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M  +   +  +T +    ++  +H +  + VVD+    IGIV   DL+
Sbjct: 2   LKVRDIMTTDVVSVKRETTIRELAEIFTKHRVGSVPVVDESGNLIGIVTESDLI 55



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +V    P+ +   I+S K+   + VV EG++L G+++  D+ R   K
Sbjct: 104 MVTPDTPVSEVADIMSSKKLHALPVV-EGKRLVGMVSRIDLIRTMVK 149


>gi|76802335|ref|YP_327343.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558200|emb|CAI49788.1| CBS domain protein 4 [Natronomonas pharaonis DSM 2160]
          Length = 150

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 47/114 (41%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKD--LNT 282
             + +        L  A   +     G V V D+     G++TE D  R  F  D   + 
Sbjct: 7   MTERVVTCHANVSLRTAAGRMLRNDVGSVIVRDDE-TPVGMVTETDALRAGFAADVAFSE 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V  VM +    I +D  L  A + + + NI  L VV+D    +G++   D++
Sbjct: 66  IPVSKVMNRPLVTITKDKTLRRATERMEEENIKKLPVVEDFD-LVGVLTAHDVI 118



 Score = 42.6 bits (99), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           V++ M +       +  L  A   + ++++  ++V DD    +G+V   D LR G
Sbjct: 3   VKEAMTERVVTCHANVSLRTAAGRMLRNDVGSVIVRDDE-TPVGMVTETDALRAG 56


>gi|289193183|ref|YP_003459124.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288939633|gb|ADC70388.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 186

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 6/117 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDI-FRNFHKDL--N 281
                +V     + D   ++ E+   CV VV E    +  G+ T+ DI  R   K L  +
Sbjct: 11  MKKPIVVSGDVSVYDVAKLMVEQDVPCVLVVCERPNHESIGVATDKDIIKRVLIKKLSPD 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + VED+       I  +T +  A++++ ++  + L +VD+  K IG++   DL++ 
Sbjct: 71  KVKVEDISSGKLVTIPPNTTIDEALKIMNKYKTNELFIVDE-GKIIGVITQEDLIKI 126



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  S   +  +     + +A+ I+++ +   + +VDE  K+ G+IT+ D+ +
Sbjct: 71  KVKVEDISSGKLVTIPPNTTIDEALKIMNKYKTNELFIVDE-GKIIGVITQEDLIK 125


>gi|262280481|ref|ZP_06058265.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter calcoaceticus
           RUH2202]
 gi|262258259|gb|EEY76993.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter calcoaceticus
           RUH2202]
          Length = 488

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMSQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I +      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITTANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 203


>gi|261210980|ref|ZP_05925270.1| Signal transduction protein [Vibrio sp. RC341]
 gi|260839955|gb|EEX66555.1| Signal transduction protein [Vibrio sp. RC341]
          Length = 629

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/186 (16%), Positives = 65/186 (34%), Gaps = 28/186 (15%)

Query: 179 AIMQLAIGDALAIA----LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG------- 227
           +    AI D L       L    +   + F       +   L                  
Sbjct: 93  SFAVSAIEDTLLYCIPEDLFHRLHQEFDSFADFVEVEQSVRLRQTVKKQKEQNDLITSKV 152

Query: 228 -----DSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI- 272
                   P +     +  A   ++++    + ++D         +   + GIITE D+ 
Sbjct: 153 KQLLTHPAPTIDKNASIQQAALRMADENVSALLILDNQILQDEEDDSTPVVGIITERDLC 212

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   + ++ T +V  VM      +  +  +  AM  + ++N+  L V+ + ++ IGI+ 
Sbjct: 213 RRVLAQGIDITQAVTKVMTYEVISLDHNAYVYEAMLTMLRNNVHHLPVLRE-KQPIGIID 271

Query: 332 FLDLLR 337
             D++R
Sbjct: 272 MTDIVR 277


>gi|182418323|ref|ZP_02949618.1| nucleotidyl transferase [Clostridium butyricum 5521]
 gi|237666616|ref|ZP_04526601.1| nucleotidyl transferase [Clostridium butyricum E4 str. BoNT E
           BL5262]
 gi|182377705|gb|EDT75249.1| nucleotidyl transferase [Clostridium butyricum 5521]
 gi|237657815|gb|EEP55370.1| nucleotidyl transferase [Clostridium butyricum E4 str. BoNT E
           BL5262]
          Length = 347

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 3/114 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVE 286
            +  L++    + +AI  L       + VV E +KL G +T+GD+ R   K+ +    + 
Sbjct: 1   MNEILIQKNISIREAIKKLDSTGKKILLVV-ENKKLIGTVTDGDVRRWILKNGDFEKEIF 59

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++M  NPK I        A  ++    +  L VVDD +  I ++   D +   +
Sbjct: 60  NIMNTNPKFINVKDR-YQAKNVMEDCFVDALPVVDDNKNIIEVIFLNDKINEKV 112


>gi|59713120|ref|YP_205896.1| cyclic nucleotide binding protein/CBS domain-containing proteins
           [Vibrio fischeri ES114]
 gi|197336429|ref|YP_002157301.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
 gi|59481221|gb|AAW87008.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio fischeri
           ES114]
 gi|197317919|gb|ACH67366.1| cyclic nucleotide binding protein [Vibrio fischeri MJ11]
          Length = 626

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 52/121 (42%), Gaps = 10/121 (8%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-------EGQKLKGIITEGDI-FRNFHK 278
                +++    +  A   ++E+    V + D       E     GIIT+ D+  +    
Sbjct: 158 TREAVMIEKNQTIQSAAKTMAEENVSAVLITDPDIDIEEEDNNFVGIITDRDLCTKVLAC 217

Query: 279 DLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+    V +VM      +  +  +  AM ++ ++N+  L V+   ++ IG++   D++R
Sbjct: 218 GLDFETPVSEVMSTELISLDHNAYVFEAMLMMLRYNVHHLPVL-RNKQPIGVIEVSDIVR 276

Query: 338 F 338
           +
Sbjct: 277 Y 277



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 31/66 (46%), Gaps = 7/66 (10%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-------DCQKAIGI 329
             DL T  V+ ++ +   +I ++  +  A + + + N+S +++ D       +    +GI
Sbjct: 145 ANDLTTSKVKTLITREAVMIEKNQTIQSAAKTMAEENVSAVLITDPDIDIEEEDNNFVGI 204

Query: 330 VHFLDL 335
           +   DL
Sbjct: 205 ITDRDL 210


>gi|311695071|gb|ADP97944.1| transcriptional regulator, RpiR family protein [marine bacterium
           HP15]
          Length = 297

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 63/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ + Q         A++ +   K ++   G+G S  +             P     
Sbjct: 119 IASLDKARQALDPKALATAIDYLIQAK-QINFFGMGGSAAVAMDAQHKFFRFNIPVMSYD 177

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A             D+I+++S++G + E   I   AR     +I IT    S +A    
Sbjct: 178 DALMQRMVAAGANVGDVIVLISYTGRTRETVDIAQLARANGATVIGIT-NPDSPLAESCT 236

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +VL +    ++  +   P +S I+ L++ D LA  +   R 
Sbjct: 237 VVLGVTAPEDTEVY--MPMSSRIIHLSVIDILATGVTLKRG 275


>gi|227889433|ref|ZP_04007238.1| transcriptional regulator [Lactobacillus johnsonii ATCC 33200]
 gi|227849911|gb|EEJ59997.1| transcriptional regulator [Lactobacillus johnsonii ATCC 33200]
          Length = 279

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/188 (22%), Positives = 78/188 (41%), Gaps = 14/188 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV-ITGI 72
           +    +    +Q AL  I  EK  ++ ++S+L    + Q    +  I+  K R+V I+  
Sbjct: 81  ESLRELPKDDIQAALAQI--EKNKINEIQSTLGHIPTDQLEQILSLIE--KSRIVQISAE 136

Query: 73  GKSGHIGSKLASTLASTGTPSF----FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           G +  + +         G  SF     V  A+A   +L      D +IV+S SG S  L 
Sbjct: 137 GDTYPVAADAVYKFNQIGILSFASGGNVETADAQTMNL---NNKDCLIVISNSGESAALI 193

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             +  A++  + +I IT+   S +A ++D  L          +      S +    I +A
Sbjct: 194 KEIELAKKNKLKIIGITNNPDSPIALNSDYHLRTGVRQTVLQNQYYF--SRVAAFTIIEA 251

Query: 189 LAIALLES 196
           L + L++ 
Sbjct: 252 LFLLLIKR 259


>gi|15889056|ref|NP_354737.1| hypothetical protein Atu1752 [Agrobacterium tumefaciens str. C58]
 gi|15156853|gb|AAK87522.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 144

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 44/119 (36%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
             G  +  V     + +A   L   + G V V D    + GI TE D+ +          
Sbjct: 11  RKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDLVKAVAGQGAASL 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             SV   M KN      ++     M+++       + V ++  +  GI+   D+++  I
Sbjct: 71  QQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPV-EENGRLAGIISIGDVVKARI 128



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 24/63 (38%), Gaps = 5/63 (7%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F KDL      DV       +  D  +  A   L  H I  ++V D     +GI    DL
Sbjct: 4   FVKDLLDRKGRDV-----VTVGPDVSIGEAAGTLHAHKIGAVVVTDADGVVLGIFTERDL 58

Query: 336 LRF 338
           ++ 
Sbjct: 59  VKA 61


>gi|327310840|ref|YP_004337737.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
 gi|326947319|gb|AEA12425.1| signal-transduction protein [Thermoproteus uzoniensis 768-20]
          Length = 137

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFH-KDLNTL 283
                 +     L+DA+  L++   G + VV  +E      +I+E D+ R  + +   + 
Sbjct: 15  RRPPVTILPDETLLDAVDRLAQHNIGALVVVRREEPDVALAVISERDVVRALNMRMALST 74

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE  M +    +  D  L+ A +L+ ++N+  L VV    +  G++   DLLR
Sbjct: 75  PVEAFMSRGVISVEADEPLSRAAELMWRYNVRHL-VVTKGGRLYGVISVRDLLR 127



 Score = 43.7 bits (102), Expect = 0.038,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
           L   D++ + P  IL D  L  A+  L QHNI  L+VV  ++   A+ ++   D++R 
Sbjct: 8   LKAGDLVRRPPVTILPDETLLDAVDRLAQHNIGALVVVRREEPDVALAVISERDVVRA 65


>gi|311031293|ref|ZP_07709383.1| Acetoin utilization protein (CBS, ACT domains) [Bacillus sp. m3-13]
          Length = 214

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  +     +  A+ ++ EK    + +V+   +L GII++ D+       L   S 
Sbjct: 7   MKKNVHTLLPTDTVEHALHLMEEKNIRHIPIVNNMMQLVGIISDRDVRNGLQAALYENSA 66

Query: 286 ED--------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++        VM  N         +        ++ I  L ++ D  K +GIV   DLL
Sbjct: 67  QEDLQQPLSKVMKTNLLTGHPLDFVEEVAATFYEYKIGCLPIIQDS-KLVGIVTETDLL 124



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE +M KN   +L    +  A+ L+ + NI  + +V++  + +GI+   D
Sbjct: 3   VERIMKKNVHTLLPTDTVEHALHLMEEKNIRHIPIVNNMMQLVGIISDRD 52


>gi|110802671|ref|YP_697849.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium perfringens SM101]
 gi|110683172|gb|ABG86542.1| glycine betaine/carnitine/choline transport ATP-binding protein
           [Clostridium perfringens SM101]
          Length = 378

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           VK    ++  I I+   +   + V+D+   LKGI+T  DI      +  +  + ++M +N
Sbjct: 262 VKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDIK---ITNEKSRVLSEIMSEN 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  + ED  L   + ++ ++++  + VV+  +K +G++    LL
Sbjct: 319 PLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLL 362



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 31/57 (54%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + + +  +D+MIKNP  +     +   ++++R + +  L+V+D      GIV F D+
Sbjct: 245 NPDFIKAKDIMIKNPVSVKGARTILQGIEIMRSNKVDSLLVIDKENVLKGIVTFKDI 301



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   V     L+D +T+++E   G + VV+  +KL G+IT   +          + V
Sbjct: 315 MSENPLRVNEDDSLVDILTVMNENSVGFIPVVNSEEKLVGLITRSSLLSILSDQFLDMEV 374


>gi|117927799|ref|YP_872350.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
 gi|117648262|gb|ABK52364.1| putative signal-transduction protein with CBS domains [Acidothermus
           cellulolyticus 11B]
          Length = 155

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 6/111 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V +  P+ D   +L + R   V VVD    + G+++E D+     K       
Sbjct: 7   MKAPVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLISRTGK-----VA 61

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D+M      + EDT +     LL    I  + VV    + IGIV   DL+
Sbjct: 62  ADIMSTGVISVTEDTEVEDVRHLLLDRRIRRVPVV-SGGQLIGIVSRADLV 111



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+++M      +  DT +     LL QH IS + VVD     +G+V   DL+
Sbjct: 1   MKVKEIMKAPVYTVDVDTPVADIAHLLVQHRISAVPVVDASGAVVGLVSEHDLI 54


>gi|85716127|ref|ZP_01047103.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
 gi|85697126|gb|EAQ35008.1| hypothetical protein NB311A_11125 [Nitrobacter sp. Nb-311A]
          Length = 147

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 50/126 (39%), Gaps = 10/126 (7%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----- 277
             +    +  V     + +   + +   F    VVD+     G++T+ D  + F      
Sbjct: 10  DRYMTRQVKTVSCDVTMQELNDLFASDDFNAYPVVDDQGDAVGLVTKFDFLKCFALTLSS 69

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +L   +V D M+     +   T L   +QL+ +H +  + V+D  Q  +GI+  
Sbjct: 70  MVPRYDELMKRTVSDTMVHEFIYVSATTKLVRVLQLMVEHRLRSVPVMDTEQHLVGIISR 129

Query: 333 LDLLRF 338
            D++R 
Sbjct: 130 EDVMRA 135



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V     L+  + ++ E R   V V+D  Q L GII+  D+ R  
Sbjct: 86  MVHEFIYVSATTKLVRVLQLMVEHRLRSVPVMDTEQHLVGIISREDVMRAL 136



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 24/56 (42%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +V+  M +  K +  D  +     L    + +   VVDD   A+G+V   D L+
Sbjct: 6   EQTVDRYMTRQVKTVSCDVTMQELNDLFASDDFNAYPVVDDQGDAVGLVTKFDFLK 61


>gi|312135969|ref|YP_004003307.1| putative signal transduction protein with cbs domains
           [Caldicellulosiruptor owensensis OL]
 gi|311776020|gb|ADQ05507.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor owensensis OL]
          Length = 123

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     +VDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKFALEQMQKRKKSVAVIVDESDFLKGIIVKADIYRFLSQPGHFETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+++IS + VVDD  K IG++   D++
Sbjct: 75  VITADKNDDIKDVAKLLRENDISAVPVVDD-GKVIGLIGLEDIV 117


>gi|238926624|ref|ZP_04658384.1| RpiR family transcription regulator [Selenomonas flueggei ATCC
           43531]
 gi|238885570|gb|EEQ49208.1| RpiR family transcription regulator [Selenomonas flueggei ATCC
           43531]
          Length = 280

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 62/176 (35%), Gaps = 6/176 (3%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           +G+     +  + A + + A    + +LE +               +   + R+   G+G
Sbjct: 83  RGNIQNGETPRETARKLLSA---NVIALEKTQDIIADETIDRCARLLIGAQ-RIAFIGLG 138

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            SG I           G                 ++   D+I+ +S SG + ++ A +  
Sbjct: 139 YSGIIAQDSCFKFLRIGMNCIAPRDNHTMRMIAAIMEPGDVIVAISHSGETADILATVDI 198

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           AR   + +I++T  + S +   +D+ LT          G     S   Q  + D +
Sbjct: 199 ARARGLRVISLTEHHPSRLRSASDVSLTYIAAETPLETGSI--ASKTAQFFLVDLV 252


>gi|225463532|ref|XP_002265413.1| PREDICTED: hypothetical protein [Vitis vinifera]
 gi|301318130|gb|ADK66980.1| chloride channel ClC2 [Vitis vinifera]
          Length = 589

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/137 (23%), Positives = 48/137 (35%), Gaps = 30/137 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              +   V     L +A   + +++  CV VVD    L+GI+T GDI R   K       
Sbjct: 425 MSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRYLSKKSKEAPK 484

Query: 279 ------DLNTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                 D+N   V  V           +       DT L  A +L+    I  L VV   
Sbjct: 485 GDSSLPDVNASLVSSVCTRGMSYRGRARGLLTCYPDTDLASAKELMEAKGIKQLPVVKRG 544

Query: 324 QKA--------IGIVHF 332
            +         + I+H+
Sbjct: 545 GEPKKERKRSIVAILHY 561



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 25/59 (42%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V   M KN   +     L  A + +     + ++VVD      GI+ + D+ R+
Sbjct: 416 LEDLKVSQAMSKNFVKVSSTMTLKEATKCMHDRQQNCVLVVDAEDFLEGILTYGDIKRY 474


>gi|209695481|ref|YP_002263410.1| DNA-binding transcriptional regulator HexR [Aliivibrio salmonicida
           LFI1238]
 gi|208009433|emb|CAQ79716.1| HTH-type transcriptional regulator HexR [Aliivibrio salmonicida
           LFI1238]
          Length = 284

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K ++   G+G S  +     +       P                 T 
Sbjct: 117 QINRAVDLLTQAK-KISFFGLGASASVAHDAMNKFFRFNIPITCFDDIVMQRMSCINSTE 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++++S +G +  L  I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 176 NDVVVLISHTGRTKSLVEIAELARSNGATVIAITAKE-SPLEKMSSLAICLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|294494705|ref|YP_003541198.1| hypothetical protein Mmah_0015 [Methanohalophilus mahii DSM 5219]
 gi|292665704|gb|ADE35553.1| CBS domain containing membrane protein [Methanohalophilus mahii DSM
           5219]
          Length = 279

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 55/122 (45%), Gaps = 12/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + ++    P+  A  ++   +   + VV+E + +KGI+T+ DI             
Sbjct: 7   MSAPVYVIGTEEPVSHARKLMFRHKISTLIVVEEDE-IKGIVTKSDISSRLAQAEPMWRR 65

Query: 278 KDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++ +  + VM   P   I  D  ++ A+ L+ ++ I+ L V     K  GIV   D++
Sbjct: 66  RPIDKIPAKMVMTAEPIITIYPDASVSQAINLMLENQINNLPVF--KNKLQGIVTIGDIV 123

Query: 337 RF 338
           R+
Sbjct: 124 RY 125



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 52/114 (45%), Gaps = 2/114 (1%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            ++ + + I  +     +  AI ++ E +   + V     KL+GI+T GDI R       
Sbjct: 74  KMVMTAEPIITIYPDASVSQAINLMLENQINNLPVF--KNKLQGIVTIGDIVRYVADRAL 131

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           T  + +V+  +   +     +   +  + +H +S ++V++D    +G++   D+
Sbjct: 132 TTKISEVLTDDAVEVHRHHTINHVIDEMEKHRVSKVIVINDMGDTVGMISTRDI 185



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 52/134 (38%), Gaps = 29/134 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-------- 284
           V     +   I  + + R   V V+++     G+I+  DI  +  +D             
Sbjct: 146 VHRHHTINHVIDEMEKHRVSKVIVINDMGDTVGMISTRDIALSAMEDNEGKMQSKNIKMA 205

Query: 285 --------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                                ED+M++   V+  +  L+ A +++ ++N + L V +   
Sbjct: 206 RKPTQGGEKTYRYVKDVPLVAEDIMVELDGVVNIEDNLSDAAKVMVENNRTGLPV-EKEG 264

Query: 325 KAIGIVHFLDLLRF 338
           K +GI+  +D++R 
Sbjct: 265 KIVGILSRIDIIRA 278



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M     VI  +  ++ A +L+ +H IS L+VV++ +   GIV   D+
Sbjct: 3   VSDIMSAPVYVIGTEEPVSHARKLMFRHKISTLIVVEEDE-IKGIVTKSDI 52


>gi|197123713|ref|YP_002135664.1| hypothetical protein AnaeK_3318 [Anaeromyxobacter sp. K]
 gi|196173562|gb|ACG74535.1| protein of unknown function DUF190 [Anaeromyxobacter sp. K]
          Length = 436

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 53/138 (38%), Gaps = 27/138 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +P V+    L +    ++  R     V+DE ++  G++T+ ++             
Sbjct: 285 MRRDVPAVRPDTSLPEVFQAVTSTRLNRALVLDEERRPVGLVTDAELLERVTPALRPGAI 344

Query: 274 RNFHKDL---------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           R   + L                  +  DVM ++   + ED LL+ A+  + +    VL 
Sbjct: 345 RALMQRLPFRHAKGEESAAAHTRGRTAADVMSRHVATVREDVLLSEAIASMLRGEDKVLA 404

Query: 319 VVDDCQKAIGIVHFLDLL 336
           V D   + +GIV   DLL
Sbjct: 405 VTDAEGRVVGIVDRADLL 422



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 56/157 (35%), Gaps = 24/157 (15%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D  +  P              + S D +  V    P+ + + +   K +  V VV E  +
Sbjct: 103 DVLLFEPHPVRDLTTTAVVADVMSRDVVT-VARSTPVREVVELTLGKTYRAVPVV-EDGR 160

Query: 263 LKGIITEGDI-----------------FRNFHKDLNTLS-----VEDVMIKNPKVILEDT 300
             GI+T  D+                      + L  L+       DVM  +P  +    
Sbjct: 161 PVGIVTSSDLVHRGGLGVRLDLLARLDKPALQELLERLTQQRRTAADVMTPDPVTVSSSA 220

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  A +L+ +  +  L VVD     +GIV  +DLLR
Sbjct: 221 SLPAAAELMVRGRLKRLPVVDHAGSLVGIVSRVDLLR 257



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 40/101 (39%), Gaps = 13/101 (12%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------LNTLSVEDVMI 290
            ++   R   + VVD    L GI++  D+ R                  +    +  VM 
Sbjct: 227 ELMVRGRLKRLPVVDHAGSLVGIVSRVDLLRTVGIGYGKKEPVARELGLVGDQPLSRVMR 286

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++   +  DT L    Q +    ++  +V+D+ ++ +G+V 
Sbjct: 287 RDVPAVRPDTSLPEVFQAVTSTRLNRALVLDEERRPVGLVT 327



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 265 GIIT--EGDIF---RNFHKDLNTLSV-EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           G+IT  + D+     +  +DL T +V  DVM ++   +   T +   ++L        + 
Sbjct: 95  GLITVDDTDVLLFEPHPVRDLTTTAVVADVMSRDVVTVARSTPVREVVELTLGKTYRAVP 154

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VV +  + +GIV   DL+  G
Sbjct: 155 VV-EDGRPVGIVTSSDLVHRG 174


>gi|119898433|ref|YP_933646.1| putative inosine-5'-monophosphate dehydrogenase related protein
           [Azoarcus sp. BH72]
 gi|119670846|emb|CAL94759.1| putative inosine-5'-monophosphate dehydrogenase related protein
           [Azoarcus sp. BH72]
          Length = 143

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFH--KDLNTLSVEDVMIK 291
               +++A   +++   G + +V     L GI TE D + R     +D     + +VM +
Sbjct: 20  EHMTVLEASRRMTDLHVGSIMIV-HDGHLSGIFTERDALVRVIAAGRDPARTRLSEVMTR 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P+ I  D  L  AM L+ +     + V D C + IG++   D L
Sbjct: 79  DPQSISSDRPLGHAMHLMYEGGFRHVPVTD-CGRPIGMISARDAL 122


>gi|283469557|emb|CAQ48768.1| SIS domain protein [Staphylococcus aureus subsp. aureus ST398]
          Length = 266

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 82/199 (41%), Gaps = 9/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQC---ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           + +F+ +       M  + ++      R     ++ +      +  ++   F   ++K++
Sbjct: 60  YENFQDLKFNIQQEMTETVIENSPIIQRIHKYHQQIIQQTGEFINNDIIQTF---IDKLQ 116

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           + +  ++  G+G SG   ++    +   G        +        +++  D+ I +S S
Sbjct: 117 SSR-HILFAGLGSSGLSATEFYYRMIRMGLKGNVTTDSHLMKISASLLSHSDMFIAMSNS 175

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G++ EL +    A+     ++AIT+   S +   AD+VL    +  +  H      + I 
Sbjct: 176 GNTSELISAAEVAKSHGAYVVAITNFEGSKLTDCADLVLLTTDQSRNTDH--QFINTQIA 233

Query: 182 QLAIGDALAIALLESRNFS 200
            L + D ++  LLE+ N S
Sbjct: 234 TLFLIDIVSYHLLENTNLS 252


>gi|15894266|ref|NP_347615.1| CBS domain-containing protein [Clostridium acetobutylicum ATCC 824]
 gi|15023886|gb|AAK78955.1|AE007614_3 Uncharacterized protein containing two CBS domains [Clostridium
           acetobutylicum ATCC 824]
 gi|325508393|gb|ADZ20029.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
          Length = 125

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 3/114 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT 282
               ++  VK    L DA+ ++         VVD   ++ GI+ + DI+R        +T
Sbjct: 6   MMIKNVVKVKDSDTLKDALKVMINNTVNSAPVVDNNDEIVGIVVKADIYRFLIEEGHYDT 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE VM +    +  +T L    ++LR ++I  + +V + +KAIG+V   DLL
Sbjct: 66  YPVEAVMTRKVITVDVNTDLMEVGKILRDNSIFAVPIV-EDKKAIGLVTVEDLL 118



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 32/54 (59%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D+MIKN   + +   L  A++++  + ++   VVD+  + +GIV   D+ RF
Sbjct: 3   IKDMMIKNVVKVKDSDTLKDALKVMINNTVNSAPVVDNNDEIVGIVVKADIYRF 56


>gi|323331051|gb|EGA72477.1| Imd2p [Saccharomyces cerevisiae AWRI796]
          Length = 523

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G++T  DI   F +D ++L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGVVTSRDI--QFVED-SSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|307546032|ref|YP_003898511.1| inosine-5-monophpsphate dehydrogenase [Halomonas elongata DSM 2581]
 gi|307218056|emb|CBV43326.1| K07182 CBS domain-containing protein [Halomonas elongata DSM 2581]
          Length = 671

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/151 (19%), Positives = 58/151 (38%), Gaps = 20/151 (13%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--- 261
            V         +      ++       +V+    + +A   + + +   V V+DE     
Sbjct: 172 AVEQQKKNNDMIVTRVRKLL--TRYPVMVEASTTVQEAARQIGDFQASAVLVLDEPGDNP 229

Query: 262 ------------KLKGIITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQ 307
                       +++GI+T+ D   R   +       V DV+      I  D  +  AM 
Sbjct: 230 RYTFRDSEDRAWQVRGILTDSDFRTRVVAEGRPPDTPVGDVVANKVIAIQSDESVHEAML 289

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++NI  L V+   ++ +GIVH  D++R+
Sbjct: 290 CMLRNNIHHLPVM-HRRRPVGIVHLSDIIRY 319


>gi|306823983|ref|ZP_07457357.1| 6-phospho 3-hexuloisomerase [Bifidobacterium dentium ATCC 27679]
 gi|309801967|ref|ZP_07696081.1| 6-phospho 3-hexuloisomerase [Bifidobacterium dentium JCVIHMP022]
 gi|304552981|gb|EFM40894.1| 6-phospho 3-hexuloisomerase [Bifidobacterium dentium ATCC 27679]
 gi|308221415|gb|EFO77713.1| 6-phospho 3-hexuloisomerase [Bifidobacterium dentium JCVIHMP022]
          Length = 183

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 70/185 (37%), Gaps = 15/185 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
            L  I+ E +G+      +          A+  I     R+   G G+SG      A  +
Sbjct: 7   VLERIVEEIQGV------IARMDENDLERAMALI-TKGSRIYAAGEGRSGFQARSFAMRM 59

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G  S+ +            +   D+++ +S SG +         A++  + +IA+TS
Sbjct: 60  MHIGYTSYMMGETICP-----SMREGDVLLAISGSGKTRRTVEDAEAAKKLGVRVIAVTS 114

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI---MQLAIGDALAIALLESRNFSEND 203
           ++ S +A  AD V+ +P   +    G     S++         DAL + L    + S+ D
Sbjct: 115 KSDSPLASVADAVIVVPGRVKGESSGSIQLLSSLFDQSVHIALDALCLMLSRRDDVSDAD 174

Query: 204 FYVLH 208
               H
Sbjct: 175 ANANH 179


>gi|238752847|ref|ZP_04614313.1| RpiR family regulatory protein [Yersinia rohdei ATCC 43380]
 gi|238708943|gb|EEQ01195.1| RpiR family regulatory protein [Yersinia rohdei ATCC 43380]
          Length = 286

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 43/183 (23%), Positives = 68/183 (37%), Gaps = 15/183 (8%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQ------------FHCAVEKIKAIKGRVVITGIGK 74
           AL + I+ +  L  +   L  E +              F   V  I     RV I GI  
Sbjct: 87  ALHNSISSEDSLMVMAQKLAHEKTASIMETTRKINFSVFQHIVSLI-NTASRVQIVGIWG 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG     L+  L   G  +               +T  D+ IVLS++G   +++     A
Sbjct: 146 SGLTAKDLSYKLQKIGIVTLVEADLHVQIAAALTLTPKDVQIVLSFTGRRKDMRIAATVA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +IAIT    S +A  AD VL    +        +  +S   Q  + D + +AL+
Sbjct: 206 KAQGATVIAITGSKVSPLAKIADYVLESVSDENEWR--SSSISSRTAQNTLTDLIFLALM 263

Query: 195 ESR 197
           + R
Sbjct: 264 QLR 266


>gi|91779666|ref|YP_554874.1| RpiR family transcriptional regulator [Burkholderia xenovorans
           LB400]
 gi|91692326|gb|ABE35524.1| transcriptional regulator, RpiR family [Burkholderia xenovorans
           LB400]
          Length = 287

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 44/200 (22%), Positives = 73/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    V     ++ ++  VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGVPYASTAVARDDDVQTLMDKVGEAAIGGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A         S             G++   D+   +
Sbjct: 128 LSSAR-RVFFFGVGSGSGLVAQDAALRFLRLDIASTAFTDGHLQRLYAGLMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVPSPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|190408188|gb|EDV11453.1| inosine-5'-monophosphate dehydrogenase IMD2 [Saccharomyces
           cerevisiae RM11-1a]
          Length = 524

 Score = 74.2 bits (181), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 12/188 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            +  V    K  +         +S +  +   D A+ +ALL    F  ++         +
Sbjct: 53  PSSAVSLQTKLTKKITLNTPFVSSPMDTVTEADMAIYMALLGGIGFIHHNCTPKEQASMV 112

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEG---QKLKGIITE 269
             + +  +  ++S     ++     + +   ++  K  F    V ++G    KL G++T 
Sbjct: 113 KKVKMFENGFINS---PIVISPTTTVGEV-KVMKRKFGFSGFPVTEDGKCPGKLVGLVTS 168

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI   F +D ++L V +VM KNP   ++   L    ++L+Q     L++VDD    + +
Sbjct: 169 RDI--QFLED-DSLVVSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSM 225

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 226 LSRADLMK 233


>gi|256810326|ref|YP_003127695.1| CBS domain containing protein [Methanocaldococcus fervens AG86]
 gi|256793526|gb|ACV24195.1| CBS domain containing protein [Methanocaldococcus fervens AG86]
          Length = 272

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +    +  V     + D I +L E       VV E  KL GI++  DI     
Sbjct: 1   MSVKVSEYMTKKVVTVSKDNTVKDVIKLLKETGHNSFPVV-EDGKLVGIVSVHDI---VG 56

Query: 278 KDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           KD N   VE+VM K     V   +  +    +++ +   S L VVD     +GI+  +D+
Sbjct: 57  KDDNE-KVENVMTKREDMVVTHPEANIMDVGRIMFRTGFSKLPVVDKENNLVGIISNMDV 115

Query: 336 LR 337
           +R
Sbjct: 116 IR 117



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                +VM   + + +      ++D   I+    F  + VVD+   L GII+  D+ R
Sbjct: 60  NEKVENVMTKREDMVVTHPEANIMDVGRIMFRTGFSKLPVVDKENNLVGIISNMDVIR 117


>gi|299768406|ref|YP_003730432.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter sp. DR1]
 gi|298698494|gb|ADI89059.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter sp. DR1]
          Length = 488

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMSQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I +      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITTANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 203


>gi|56964308|ref|YP_176039.1| hypothetical protein ABC2543 [Bacillus clausii KSM-K16]
 gi|56910551|dbj|BAD65078.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
          Length = 698

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 43/112 (38%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    + +    L         VVDE   L G+IT  D+ +     +    V
Sbjct: 182 MSKPVITVQTSQLIDEVWQTLLRSGHSGFPVVDETGALAGVITRMDLAKARQFGMGEAQV 241

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM      +  +  +  A   L  + +  L VV D  + IGIV   D++R
Sbjct: 242 TEVMSMPNITLRANDSIDAACAHLAYNQVGRLPVVGDNNEPIGIVTRTDIVR 293



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 22/55 (40%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  VM K    +    L+    Q L +   S   VVD+     G++  +DL + 
Sbjct: 177 KIASVMSKPVITVQTSQLIDEVWQTLLRSGHSGFPVVDETGALAGVITRMDLAKA 231



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 13/92 (14%), Positives = 32/92 (34%), Gaps = 5/92 (5%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  D       G           +         ++    +  A   L+  + G + VV 
Sbjct: 223 ITRMDLAKARQFGMGEAQVTEVMSM-----PNITLRANDSIDAACAHLAYNQVGRLPVVG 277

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +  +  GI+T  DI R+ + + + ++  ++  
Sbjct: 278 DNNEPIGIVTRTDIVRSLYPNKHAVAPSELAS 309


>gi|300703837|ref|YP_003745439.1| hypothetical protein RCFBP_11530 [Ralstonia solanacearum CFBP2957]
 gi|299071500|emb|CBJ42824.1| conserved protein of unknown function, CBS domain [Ralstonia
           solanacearum CFBP2957]
          Length = 156

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 6/124 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIF---R 274
                    I  V     L +A  ++ ++    V V + G    ++ GI T+ D+     
Sbjct: 2   RVDEICSPRIVHVPGSATLQNAARLMRDQHVRAVFVTEPGITGMRVVGIATDRDMVVHGL 61

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D   +++  VM +    I    +++ A++++  H +  L V+DD QK IG++   D
Sbjct: 62  AGETDCGHVAIAHVMTRGVLTIHGHAVVSDALRMMLGHGLHRLAVIDDQQKLIGMLTLDD 121

Query: 335 LLRF 338
            +R 
Sbjct: 122 AIRA 125



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  G        + H      L +     + DA+ ++       +AV+D+ QKL G++T 
Sbjct: 60  GLAGETDCGHVAIAHVMTRGVLTIHGHAVVSDALRMMLGHGLHRLAVIDDQQKLIGMLTL 119

Query: 270 GDIFRNFHKDLNTL 283
            D  R    +   L
Sbjct: 120 DDAIRAIGGEWTLL 133


>gi|257883571|ref|ZP_05663224.1| phosphosugar isomerase [Enterococcus faecium 1,231,502]
 gi|257891343|ref|ZP_05670996.1| phosphosugar isomerase [Enterococcus faecium 1,231,410]
 gi|257894731|ref|ZP_05674384.1| phosphosugar isomerase [Enterococcus faecium 1,231,408]
 gi|260562634|ref|ZP_05833136.1| sugar isomerase [Enterococcus faecium C68]
 gi|261207946|ref|ZP_05922626.1| sugar isomerase [Enterococcus faecium TC 6]
 gi|294618043|ref|ZP_06697644.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecium E1679]
 gi|294622596|ref|ZP_06701594.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecium U0317]
 gi|314995920|ref|ZP_07861004.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecium
           TX0133a01]
 gi|257819229|gb|EEV46557.1| phosphosugar isomerase [Enterococcus faecium 1,231,502]
 gi|257827703|gb|EEV54329.1| phosphosugar isomerase [Enterococcus faecium 1,231,410]
 gi|257831110|gb|EEV57717.1| phosphosugar isomerase [Enterococcus faecium 1,231,408]
 gi|260072962|gb|EEW61315.1| sugar isomerase [Enterococcus faecium C68]
 gi|260077816|gb|EEW65527.1| sugar isomerase [Enterococcus faecium TC 6]
 gi|291595714|gb|EFF27006.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecium E1679]
 gi|291597928|gb|EFF29052.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecium U0317]
 gi|313589884|gb|EFR68729.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecium
           TX0133a01]
          Length = 190

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 46/188 (24%), Positives = 72/188 (38%), Gaps = 19/188 (10%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L +II E   L +    +      QF    EKI   K  + + G G+SG       + L 
Sbjct: 11  LEAIILE---LQNNSKRINSVELEQFS---EKIVQAK-HIFLAGAGRSGIAMQAFTNRLM 63

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G     V    + H         DL+I+ S SG +  LK +   A +  + +  +T +
Sbjct: 64  HLGFSVSLVGEISSPHS-----QPGDLLIICSGSGETGSLKNLAAKANQSGVSIALVTMK 118

Query: 148 NKSVVACHADIVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFS 200
             S +   AD VL LP   +            P  S+  QLA    D+L ++L++    S
Sbjct: 119 KDSSIGQLADSVLVLPGITKDENQREEDTFSQPMGSSFEQLAFLTFDSLVLSLMDKTGES 178

Query: 201 ENDFYVLH 208
               +  H
Sbjct: 179 SETMFARH 186


>gi|170741416|ref|YP_001770071.1| signal-transduction protein [Methylobacterium sp. 4-46]
 gi|168195690|gb|ACA17637.1| putative signal-transduction protein with CBS domains
           [Methylobacterium sp. 4-46]
          Length = 143

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           +   G ++  V+    L +A T+L+EK  G + V D G  + GII+E DI R   +   +
Sbjct: 7   LSQKGRTVVTVQPHRTLSEAATLLAEKGIGALVVSDAGLSVLGIISERDIIRAVARHGAE 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               S+   M          T +   M+L+       + VV++  + +G+V   D+++
Sbjct: 67  ALDHSISRHMTGRVVTCTRGTAIEEVMELMTDGRFRHVPVVEED-RLVGLVSIGDVVK 123



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 12/48 (25%), Positives = 21/48 (43%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +     L+ A  LL +  I  L+V D     +GI+   D++R 
Sbjct: 12  RTVVTVQPHRTLSEAATLLAEKGIGALVVSDAGLSVLGIISERDIIRA 59



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
            H    +     G  + + + ++++ RF  V VV+E  +L G+++ GD+ ++
Sbjct: 74  RHMTGRVVTCTRGTAIEEVMELMTDGRFRHVPVVEED-RLVGLVSIGDVVKH 124


>gi|332158026|ref|YP_004423305.1| hypothetical protein PNA2_0384 [Pyrococcus sp. NA2]
 gi|331033489|gb|AEC51301.1| hypothetical protein PNA2_0384 [Pyrococcus sp. NA2]
          Length = 282

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 32/140 (22%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------------- 274
           + +V  G PL  A+  L       + VVD+   L GI+ E D+ R               
Sbjct: 136 VSIVWKGTPLKVALKALLLSNAMALPVVDDNGNLVGIVDETDLLRDSEIVRIMKSTELAA 195

Query: 275 -----------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                             F   L    VED+M  +  V      +    + + ++ I  L
Sbjct: 196 SSEEEWILESHPTLLFEKFELQLPNKPVEDIMTTDVIVATPHMTIHEVARKMAKYKIEQL 255

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+      +G++   DLL+
Sbjct: 256 PVIKGDGDLVGLIRDFDLLK 275



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/96 (23%), Positives = 48/96 (50%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ +    +     VV++  KL GII+   I R    + +   +  ++ ++   I  +  
Sbjct: 23  ALELFKRYKVRSFPVVNKEGKLVGIIS---IKRVLT-NPDEEQLAMLVKRDVPTIKGNDD 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  A +L+ +H+   ++VVD+  + IGI+   D++R
Sbjct: 79  LRKAARLMLEHDYRRIIVVDEENRPIGILTVGDIIR 114



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 44/176 (25%), Positives = 70/176 (39%), Gaps = 20/176 (11%)

Query: 182 QLAIGDALAIALLESRNFSENDFYVLH----PGGKLGTLFVCASDVMHSGDSIP------ 231
            +   + + I L  +RN++   F        P        V    +     +        
Sbjct: 5   TIMTKNPVTITLPATRNYALELFKRYKVRSFPVVNKEGKLVGIISIKRVLTNPDEEQLAM 64

Query: 232 LVKIGCP-------LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
           LVK   P       L  A  ++ E  +  + VVDE  +  GI+T GDI R +    +   
Sbjct: 65  LVKRDVPTIKGNDDLRKAARLMLEHDYRRIIVVDEENRPIGILTVGDIIRRYFAKTEKYK 124

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +++E    +   ++ + T L VA++ L   N   L VVDD    +GIV   DLLR
Sbjct: 125 DVTIEPYYQRYVSIVWKGTPLKVALKALLLSNAMALPVVDDNGNLVGIVDETDLLR 180



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + V+ +M KNP  I        A++L +++ +    VV+   K +GI+   
Sbjct: 1   MKVKTIMTKNPVTITLPATRNYALELFKRYKVRSFPVVNKEGKLVGIISIK 51


>gi|262377196|ref|ZP_06070421.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter lwoffii
           SH145]
 gi|262307934|gb|EEY89072.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter lwoffii
           SH145]
          Length = 488

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 60/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAVQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I +        V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIALTQANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL+QH I  ++VV+D Q+  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQQHRIEKVLVVNDQQELKGLITVTDFRKA 203


>gi|27366107|ref|NP_761635.1| DNA-binding transcriptional regulator HexR [Vibrio vulnificus
           CMCP6]
 gi|161486626|ref|NP_934234.2| DNA-binding transcriptional regulator HexR [Vibrio vulnificus
           YJ016]
 gi|320156621|ref|YP_004189000.1| phosphogluconate repressor HexR, RpiR family [Vibrio vulnificus
           MO6-24/O]
 gi|27362307|gb|AAO11162.1| Glucose repressor HexR for Entner-Doudoroff pathway, RpiR family
           [Vibrio vulnificus CMCP6]
 gi|319931933|gb|ADV86797.1| phosphogluconate repressor HexR, RpiR family [Vibrio vulnificus
           MO6-24/O]
          Length = 284

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFEDVVMQRMSCINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+ +++S +G +  L  I   AR     +IA+T++  S +   A + ++L    ++  +
Sbjct: 176 NDVFVLISHTGRTKSLVEIANLARENGATVIAVTAK-DSPLEKAASLAISLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|15668360|ref|NP_247156.1| inosine-5'-monophosphate dehydrogenase [Methanocaldococcus
           jannaschii DSM 2661]
 gi|2495850|sp|Q57647|Y188_METJA RecName: Full=Uncharacterized protein MJ0188
 gi|1498962|gb|AAB98168.1| inosine-5'-monophosphate dehydrogenase, putative
           [Methanocaldococcus jannaschii DSM 2661]
          Length = 265

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 7/122 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +    +  V     + D I +L E       VV E  KL GI++  DI     
Sbjct: 1   MSVKVSEYMTKKVVTVSKDNTVKDVIKLLKETGHNSFPVV-ENGKLIGIVSVHDI---VG 56

Query: 278 KDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           KD N   VE+VM K     V   D  +    +++ +   S L VVD+    +GI+  +D+
Sbjct: 57  KDDNE-KVENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDV 115

Query: 336 LR 337
           +R
Sbjct: 116 IR 117



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 24/58 (41%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                +VM     + +      ++D   I+    F  + VVDE   L GII+  D+ R
Sbjct: 60  NEKVENVMTKRKDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGIISNMDVIR 117


>gi|294499697|ref|YP_003563397.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium QM B1551]
 gi|294349634|gb|ADE69963.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium QM
           B1551]
          Length = 182

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 72/187 (38%), Gaps = 20/187 (10%)

Query: 29  RSIIAEKRGLS-SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++I+ E   +   ++     E++F  + A         R+ + G G+SG +G   A  L 
Sbjct: 5   QTILDEITAVMNHIKEPQIEEVAFSLYQA--------KRIFVIGEGRSGLMGKSFAMRLM 56

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + V            I   D+++ +S SG + ++ ++   A+     +I I++ 
Sbjct: 57  HLGATVYVVGETITP-----SIAAGDVLVAVSGSGKTQQVVSVAKKAKEVGCSVIGISAS 111

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLA----PTTSAIMQ--LAIGDALAIALLESRNFSE 201
            +S +  H D +L +P   +      A    P  S   Q    + DA+ +      +   
Sbjct: 112 TESPLTAHTDELLHIPAATKYRSENEAASIQPLGSLFDQCAHVVFDAICLEYGNLNHTDH 171

Query: 202 NDFYVLH 208
              +  H
Sbjct: 172 EQAFKQH 178


>gi|293610583|ref|ZP_06692883.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|292826927|gb|EFF85292.1| conserved hypothetical protein [Acinetobacter sp. SH024]
 gi|325123851|gb|ADY83374.1| IMP dehydrogenase [Acinetobacter calcoaceticus PHEA-2]
          Length = 488

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMSQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I S      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITSANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 203


>gi|258621685|ref|ZP_05716716.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258585916|gb|EEW10634.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 306

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 139 QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 197

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 198 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 256

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 257 --MPMASRVVQMTVIDVLATGFTLRRG 281


>gi|302555051|ref|ZP_07307393.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
 gi|302472669|gb|EFL35762.1| CBS domain-containing protein [Streptomyces viridochromogenes DSM
           40736]
          Length = 221

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 53/130 (40%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              ++  V       D + ++ + +   + V++   ++ G+++E D+      R+   D 
Sbjct: 12  MTHTVVAVGRDAAFKDIVEVMEQWKVSALPVLEGEGRVIGVVSEADLLFKEEFRDSDPDR 71

Query: 281 NT-------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T             ++ ED+M      +  D  L  A +++ Q  +  L VV++     
Sbjct: 72  FTQLGRLSDLVKAGGMTAEDLMSSPAVTVHTDATLAQAARIMAQRKVKRLPVVNEEGLLE 131

Query: 328 GIVHFLDLLR 337
           G+V   DLL+
Sbjct: 132 GVVSRADLLK 141



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM      +  D      ++++ Q  +S L V++   + IG+V   DLL
Sbjct: 8   VSDVMTHTVVAVGRDAAFKDIVEVMEQWKVSALPVLEGEGRVIGVVSEADLL 59



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L  A  I+++++   + VV+E   L+G+++  D+ + F +    L  
Sbjct: 93  MSSPAVTVHTDATLAQAARIMAQRKVKRLPVVNEEGLLEGVVSRADLLKVFLRTDEDL-A 151

Query: 286 EDV 288
           E+V
Sbjct: 152 EEV 154


>gi|163790844|ref|ZP_02185269.1| opuCA [Carnobacterium sp. AT7]
 gi|159873912|gb|EDP67991.1| opuCA [Carnobacterium sp. AT7]
          Length = 393

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 5/135 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF       +          VM        V  G  L +AI I+ +KR   + V D+  
Sbjct: 233 EDFIGEDRLIQARPNIQTVDQVMIKNPIS--VTPGKSLSEAIRIMRDKRVDSLFVTDDAG 290

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            LKG +   DI R         SV D+MI     + E TLL   +Q + +     + VVD
Sbjct: 291 VLKGYV---DIERIDRNRKRATSVGDIMIDKVYFVREGTLLRDTVQRILKRGFKNIPVVD 347

Query: 322 DCQKAIGIVHFLDLL 336
           +  + IG+V    L+
Sbjct: 348 NKDRLIGLVTRTSLV 362


>gi|207344467|gb|EDZ71600.1| YHR216Wp-like protein [Saccharomyces cerevisiae AWRI1631]
          Length = 333

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 36/166 (21%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+IT  DI   F +D N+L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVITSRDI--QFVED-NSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|197104580|ref|YP_002129957.1| CBS domain protein [Phenylobacterium zucineum HLK1]
 gi|196478000|gb|ACG77528.1| CBS domain protein [Phenylobacterium zucineum HLK1]
          Length = 142

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
           +    + +   +L  +  G + V+D   ++ GI++E DI R   +D     T  V  +M 
Sbjct: 18  RPEETVAEVAGLLHARGVGALVVLDAE-RVVGIVSERDIVRAMAEDGASALTQPVSRIMT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            N         +   +  +    I  L V  +  + +GIV   DL++  I
Sbjct: 77  ANVLFAEPGETVDGLLGRMTDRRIRHLPVCRNE-RLVGIVSIGDLVKSKI 125


>gi|89894798|ref|YP_518285.1| inositol-5-monophosphate dehydrogenase [Desulfitobacterium
           hafniense Y51]
 gi|89334246|dbj|BAE83841.1| hypothetical protein [Desulfitobacterium hafniense Y51]
          Length = 506

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 68/186 (36%), Gaps = 21/186 (11%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
            A++ L  P        +S      P  SAIMQ    D +AIAL +           ++ 
Sbjct: 31  PANVSLKTPVVKFKKGEQSSIIMNIPLVSAIMQSVSDDKMAIALAKEGGI-----AFIYG 85

Query: 210 GGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDE---GQK 262
              +       S V +      +    VK    L D + +  +     VAV D+     K
Sbjct: 86  SQTIENQAQMVSRVKNHKAGFVISDSNVKPEDTLADILALKEKTGHSTVAVTDDGTANGK 145

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T  D      +      V + M K  +     E T L  A  ++ +H ++ L ++
Sbjct: 146 LVGLVTSRDYR--VSRMSTDTKVGEFMTKFEDLICADEKTTLKEANDIIWEHKLNSLPLI 203

Query: 321 DDCQKA 326
           D  Q+ 
Sbjct: 204 DKDQRL 209


>gi|88858121|ref|ZP_01132763.1| nucleoside-diphosphate-sugar pyrophosphorylase [Pseudoalteromonas
           tunicata D2]
 gi|88819738|gb|EAR29551.1| nucleoside-diphosphate-sugar pyrophosphorylase [Pseudoalteromonas
           tunicata D2]
          Length = 350

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 47/109 (43%), Gaps = 1/109 (0%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
             M +     ++ +   + DAI  L+      V +++E  +L G+IT+GDI R       
Sbjct: 1   MNMITSLEQAILPLNSTMQDAINALNISTLKIVLIINEQHQLVGVITDGDIRRAILAYHG 60

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
              +V+ +M   P    +    +    LL  + +  + ++   Q+ +GI
Sbjct: 61  LNSAVDLIMSHKPVTAFQGDSASKIKHLLEVNKLLHIPILTQDQRILGI 109


>gi|271966206|ref|YP_003340402.1| signal-transduction protein containing cAMP- binding and CBS
           domains-like protein [Streptosporangium roseum DSM
           43021]
 gi|270509381|gb|ACZ87659.1| signal-transduction protein containing cAMP- binding and CBS
           domains-like protein [Streptosporangium roseum DSM
           43021]
          Length = 222

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 19/124 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------------FR 274
           V       + +  +   +   VAV+D   +  G+++E D+                   R
Sbjct: 16  VHRQATCTELMATMRRFKVNAVAVIDTDGRPVGMVSEDDLLSKETGTSYGEPLFEGRRRR 75

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFL 333
              +    L+ +++M      +  +T +  A +L+R H I  L V+D    K  G VH +
Sbjct: 76  QEPEATAGLTAQEIMTSPALTVSAETPIREAARLMRDHRIKQLPVIDPTSGKITGTVHQV 135

Query: 334 DLLR 337
           DLL+
Sbjct: 136 DLLK 139


>gi|170755382|ref|YP_001780708.1| CBS domain-containing protein [Clostridium botulinum B1 str. Okra]
 gi|237794370|ref|YP_002861922.1| CBS domain-containing protein [Clostridium botulinum Ba4 str. 657]
 gi|169120594|gb|ACA44430.1| CBS domain protein [Clostridium botulinum B1 str. Okra]
 gi|229264170|gb|ACQ55203.1| CBS domain protein [Clostridium botulinum Ba4 str. 657]
          Length = 126

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               + ++     +  A+ +++E       V DE   L G+I + DI+R        +T 
Sbjct: 6   MNTHVIVLNPKDSIKKALNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM K      E+  +    + +   +I  + +VD  +K +GIV   D+L+
Sbjct: 66  PVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDSSKKLLGIVSIEDILK 119



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M  +  V+     +  A+ L+ ++NI+   V D+    IG++   D+ RF
Sbjct: 4   DIMNTHVIVLNPKDSIKKALNLMNENNINGAPVADEEGNLIGMIVKADIYRF 55


>gi|115442686|ref|XP_001218150.1| inosine-5'-monophosphate dehydrogenase [Aspergillus terreus
           NIH2624]
 gi|114188019|gb|EAU29719.1| inosine-5'-monophosphate dehydrogenase [Aspergillus terreus
           NIH2624]
          Length = 546

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++ L  P          AP  S+ M       +AI +            V+H       
Sbjct: 68  SEVTLDTPVTKRVSL--KAPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCSPEA 120

Query: 216 LFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L          + +A  + ++  FG   V + G    KL G++T
Sbjct: 121 QAEMVRKVKRYENGFILDPVVLSPKATVGEAKDLKAKWGFGGFPVTENGTLRSKLVGMVT 180

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   FH +L+   V  +M  +       T L  A ++LR      L +VD+    + 
Sbjct: 181 SRDI--QFHPNLDD-PVTAIMTTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDENGNLVS 237

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 238 LLSRSDLMK 246



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VDE   L  +++  D+ +N H
Sbjct: 206 PAGTTLAEANEVLRSSKKGKLPIVDENGNLVSLLSRSDLMKNLH 249


>gi|323483543|ref|ZP_08088928.1| hypothetical protein HMPREF9474_00677 [Clostridium symbiosum
           WAL-14163]
 gi|323690943|ref|ZP_08105234.1| hypothetical protein HMPREF9475_00095 [Clostridium symbiosum
           WAL-14673]
 gi|323403099|gb|EGA95412.1| hypothetical protein HMPREF9474_00677 [Clostridium symbiosum
           WAL-14163]
 gi|323505013|gb|EGB20784.1| hypothetical protein HMPREF9475_00095 [Clostridium symbiosum
           WAL-14673]
          Length = 313

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 69/179 (38%), Gaps = 12/179 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + +  LE +    + F     V  +     R+V  G+G+S      L S L   G    
Sbjct: 128 SKSIRELEDTWNM-MDFDILEPVANLIDRANRIVAIGVGRSKITTEALVSRLYRIGYYIV 186

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +        ++   DL+I +S  G S  +   +  A+R  + ++ ITS   S +A 
Sbjct: 187 DFCDSHEIVNITSILKEGDLLIAVSNFGQSKSVVEGVKRAKRRGVTVVGITSVKDSPLAQ 246

Query: 155 HADIVLTLPKEPESCPHGLA--PTTSAIMQLAIGDALAIA---------LLESRNFSEN 202
           ++D VL    +  S   G    P++  + QL + D L +          L   R FSE 
Sbjct: 247 YSDYVLFSAYDYASDKMGKLYEPSSENVAQLVLVDCLYMMVATKHEKENLSHYRAFSEE 305


>gi|219849495|ref|YP_002463928.1| CBS domain-containing protein [Chloroflexus aggregans DSM 9485]
 gi|219543754|gb|ACL25492.1| CBS domain containing protein [Chloroflexus aggregans DSM 9485]
          Length = 215

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 48/126 (38%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
                   V     + DA+ ++  +      VV    +L GI++  D+            
Sbjct: 6   RMSHPPITVTPETSIHDAMHLMRTEHIRRAPVV-SHGRLVGIVSLKDLINASPSPATTLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ L+VE VM +    +  DT +  A +++    +  L V+    + +GI+  
Sbjct: 65  VWELNYLLSKLTVERVMTREVYTVTVDTPIEEAARIMADRRVGGLPVM-RGNELVGIITE 123

Query: 333 LDLLRF 338
            DL + 
Sbjct: 124 TDLFKI 129



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M   P  +  +T +  AM L+R  +I    VV    + +GIV   DL+  
Sbjct: 3   VGERMSHPPITVTPETSIHDAMHLMRTEHIRRAPVV-SHGRLVGIVSLKDLINA 55



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V +  P+ +A  I++++R G + V+  G +L GIITE D+F+ F
Sbjct: 81  MTREVYTVTVDTPIEEAARIMADRRVGGLPVM-RGNELVGIITETDLFKIF 130


>gi|21226927|ref|NP_632849.1| hypothetical protein MM_0825 [Methanosarcina mazei Go1]
 gi|20905236|gb|AAM30521.1| conserved protein [Methanosarcina mazei Go1]
          Length = 283

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + IL  K    V V+ +  K+ GI+T      N  ++     +  +M ++P  I   +
Sbjct: 26  EVLKILKNKHISGVPVL-KDSKVVGIVT----RTNLLQNPEEEQLALLMTRDPITISPGS 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L  A +LL QH I  L VVDD  K +G+V   D++  
Sbjct: 81  DLQSAARLLLQHGIRRLPVVDD-GKLVGLVTVADVVGA 117



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 48/116 (41%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +  G  L  A  +L +     + VVD+  KL G++T  D+            +
Sbjct: 69  MTRDPITISPGSDLQSAARLLLQHGIRRLPVVDD-GKLVGLVTVADVVGAIADMNIDTPI 127

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +D + K    I  +T L V  +++    +  + V+D   + IGI+   D++   +I
Sbjct: 128 KDYVEKEVVAIFSETPLPVVARIMELACVKAVPVLDAALELIGIISDRDIISASVI 183



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 36/164 (21%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G +  + +      +    +  +    PL     I+       V V+D   +L GII++
Sbjct: 115 VGAIADMNIDTPIKDYVEKEVVAIFSETPLPVVARIMELACVKAVPVLDAALELIGIISD 174

Query: 270 GDIFRN----------------------FHKDLNTLSV--------------EDVMIKNP 293
            DI                         +    +T+S+               D+MI+ P
Sbjct: 175 RDIISASVIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIGSDIMIREP 234

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                   ++   + ++++ I  + +++  +K  G++   DLL+
Sbjct: 235 ITATYIASISDCARKMKRNRIDQIPIINSNRKLQGLLRDHDLLK 278



 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +ED+M+++             +++L+  +IS + V+ D  K +GIV   +LL+
Sbjct: 7   IEDIMVRDVACATLPGSRDEVLKILKNKHISGVPVLKDS-KVVGIVTRTNLLQ 58


>gi|330806285|ref|XP_003291102.1| hypothetical protein DICPUDRAFT_92611 [Dictyostelium purpureum]
 gi|325078737|gb|EGC32372.1| hypothetical protein DICPUDRAFT_92611 [Dictyostelium purpureum]
          Length = 227

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 8/111 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------S 284
           V+   PL  AI ++S+     V ++D    L  I+T+  I       ++ L        +
Sbjct: 111 VESSAPLKIAIDLMSKWNVHRVPIIDSDGGLISILTQSRIVEYLQNHIDGLGNIEKAIGT 170

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +ED   K+   I  D L+  A +L+ ++ +S L VV+     +G +   D+
Sbjct: 171 LEDFGSKSVVTIRNDRLVIDAFKLMHENGVSALPVVNQIGILVGNISVSDM 221


>gi|116328414|ref|YP_798134.1| inosine-5'-monophosphate dehydrogenase [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116331143|ref|YP_800861.1| inosine-5'-monophosphate dehydrogenase [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
 gi|116121158|gb|ABJ79201.1| Inosine-5'-monophosphate dehydrogenase [Leptospira borgpetersenii
           serovar Hardjo-bovis L550]
 gi|116124832|gb|ABJ76103.1| Inosine-5'-monophosphate dehydrogenase [Leptospira borgpetersenii
           serovar Hardjo-bovis JB197]
          Length = 508

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 72/175 (41%), Gaps = 18/175 (10%)

Query: 169 CPHGLAPTTSAIM-QLAIGDALA--IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            P   +P  +    Q+AI  AL   I ++   N  E    ++    +    F+    V+ 
Sbjct: 60  RPFISSPMDTVTESQMAIAQALMGGIGIIHYNNTIEEQVALVEKVKRFENGFITDPVVLG 119

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNT 282
             +          + D   I   K F  + V ++     KL GI+T  DI  +F ++   
Sbjct: 120 PKNI---------IRDLDRIKEHKGFTGIPVTEDGTRNSKLIGIVTNRDI--DFERN-RE 167

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +++++VM KN     E   L  A  ++++  I  L +VD   K + +V   DL +
Sbjct: 168 ITLDEVMTKNVITGKEGITLQDANDIIKKSKIGKLPIVDSDGKLVSLVSRSDLKK 222


>gi|15669410|ref|NP_248220.1| hypothetical protein MJ_1225 [Methanocaldococcus jannaschii DSM
           2661]
 gi|3183249|sp|Q58622|Y1225_METJA RecName: Full=Uncharacterized protein MJ1225
 gi|294979718|pdb|3KH5|A Chain A, Crystal Structure Of Protein Mj1225 From
           Methanocaldococcus Jannaschii, A Putative Archaeal
           Homolog Of G-Ampk.
 gi|294979781|pdb|3LFZ|A Chain A, Crystal Structure Of Protein Mj1225 From
           Methanocaldococcus Jannaschii, A Putative Archaeal
           Homolog Of G-Ampk.
 gi|1591856|gb|AAB99228.1| conserved hypothetical protein [Methanocaldococcus jannaschii DSM
           2661]
          Length = 280

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 46/106 (43%), Gaps = 2/106 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           K    + +AI     K  G   +V++  +L  +ITE D+ R     ++    ++D + ++
Sbjct: 98  KENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVIRALLDKIDENEVIDDYITRD 157

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V      L    + + ++    L VV +  + +GI+   D ++ 
Sbjct: 158 VIVATPGERLKDVARTMVRNGFRRLPVVSE-GRLVGIITSTDFIKL 202



 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 14/125 (11%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------- 279
              + +   G  L D    +    F  + VV E  +L GIIT  D  +    D       
Sbjct: 155 TRDVIVATPGERLKDVARTMVRNGFRRLPVVSE-GRLVGIITSTDFIKLLGSDWAFNHMQ 213

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  + +E++M ++     E   L    +++  ++I  L VVD+  +  GI+   
Sbjct: 214 TGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLRIKGIITEK 273

Query: 334 DLLRF 338
           D+L++
Sbjct: 274 DVLKY 278



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 54/131 (41%), Gaps = 19/131 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIF----------- 273
               I  V     +  A+  ++E ++  + VV+    K+ GIIT  DI            
Sbjct: 10  QNKKIVTVYPTTTIRKALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNL 69

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 RNF   +N   V ++M +N   + E+  +  A++     N+    +V+D  + I
Sbjct: 70  IREKHERNFLAAINE-PVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLI 128

Query: 328 GIVHFLDLLRF 338
            ++   D++R 
Sbjct: 129 SLITERDVIRA 139



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 27/75 (36%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     +   K G  L     I+     G + VVDE  +
Sbjct: 206 DWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDENLR 265

Query: 263 LKGIITEGDIFRNFH 277
           +KGIITE D+ + F 
Sbjct: 266 IKGIITEKDVLKYFA 280


>gi|328767299|gb|EGF77349.1| hypothetical protein BATDEDRAFT_36036 [Batrachochytrium
           dendrobatidis JAM81]
          Length = 712

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 3/87 (3%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMIKNPKVIL 297
            A  +++ KR   V VV E   L GI+T+ DI  R   +  D+ T  V  VM ++P  + 
Sbjct: 99  QAAQLMAAKRTDAVLVVGEDGALAGILTDKDIAYRVVAEGLDIRTTPVSSVMTRDPIAVY 158

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +      A+ ++       L V+ +  
Sbjct: 159 DKGSRNEALNIMVSRRFRHLPVISETG 185



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDI-FRNFHK--DLNTLSVE 286
           V I   + DA  I+       V V+   ++ +++ GI T  DI  R      D  T SV 
Sbjct: 281 VSIKSSVRDAARIMKAYHTTAVLVIGNSNDDEQIGGIFTTKDIVLRVIAASLDPMTTSVV 340

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            VM  +P  +L  T +  A++ L   +   L VVD     IG+V  + L 
Sbjct: 341 RVMTPHPDYVLASTSILDALKKLNTGHYLHLPVVD-GGVPIGLVDVMTLT 389


>gi|325695298|gb|EGD37198.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK150]
          Length = 280

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            A++     + +TS N   +    D ++ +  +          
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNIS 234


>gi|189500245|ref|YP_001959715.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chlorobium phaeobacteroides BS1]
 gi|189495686|gb|ACE04234.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chlorobium phaeobacteroides BS1]
          Length = 650

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 44/118 (37%), Gaps = 6/118 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LN 281
               S+        + +A  I+S+   G + VV       GIIT+ D+ R        + 
Sbjct: 175 KPVTSVITCPPDISIQEAAKIMSDSHIGSIIVVSSENHPLGIITDTDLTRKVVAQPGSVK 234

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAI-GIVHFLDLL 336
             +V  +M      I +   +   + L+ +  +    + +D      I GI+   D++
Sbjct: 235 DQAVGTIMSTPVYTISDGKTIADMVLLMVKTKLRHFCITEDGSSGSPITGIISEHDII 292



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 20/48 (41%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +      D  +  A +++   +I  ++VV      +GI+   DL R 
Sbjct: 178 TSVITCPPDISIQEAAKIMSDSHIGSIIVVSSENHPLGIITDTDLTRK 225


>gi|300787075|ref|YP_003767366.1| signal transduction protein [Amycolatopsis mediterranei U32]
 gi|299796589|gb|ADJ46964.1| signal transduction protein [Amycolatopsis mediterranei U32]
          Length = 138

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
           +    + DA   ++ K  G + +  E  +LKG+IT+ DI        KD   + V ++  
Sbjct: 16  RESDTVHDAAVTMARKGVGALPICGEDNRLKGMITDRDIVVKVLAEGKDPRAVHVGELAQ 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                I  D      ++ + +H +  L V+D     +GIV   D+ R 
Sbjct: 76  GEVVTIGADDDAQEILRTMSEHRVRRLPVIDGHD-LVGIVAQADVARA 122



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 21/54 (38%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M  +     E   +  A   + +  +  L +  +  +  G++   D++
Sbjct: 2   TTARDIMTSDATCARESDTVHDAAVTMARKGVGALPICGEDNRLKGMITDRDIV 55


>gi|297158352|gb|ADI08064.1| RpiR family transcriptional regulator [Streptomyces bingchenggensis
           BCW-1]
          Length = 309

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 65/165 (39%), Gaps = 5/165 (3%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E++ L+   + L      Q   AV  +   + R+ + G+G S  +G  L   L   G 
Sbjct: 123 QEEQQCLADTAAGLDTS---QLEAAVAALSTAR-RIDVYGVGASSLVGQDLVQKLLRIGL 178

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +        +  +   +   D+ + ++ SG + ++   L  A       +AIT      
Sbjct: 179 IAHAHADPHLAVTNAVQLHSGDVALAITHSGRTTDVIEPLRVAFEHGATTVAITGRPDGE 238

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           VA +AD VLT     ES     A  +S   QL + D L I + + 
Sbjct: 239 VAQYADFVLTTSTARESE-LRPAAMSSRTSQLLVVDCLFIGVAQR 282


>gi|242242969|ref|ZP_04797414.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           W23144]
 gi|242233570|gb|EES35882.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           W23144]
          Length = 432

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
             K+    +   D++   + + ++     + D   I +E       +V+E  KL GI+T 
Sbjct: 180 NQKIRKEILVVEDIVKPINELSVLFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I     +DL       VM KNP  +     +     LL    I +L V D+ +KA+G+
Sbjct: 240 REIINMNEEDLL----GKVMTKNPLSVKLTNTVASCAHLLIWEGIELLPVTDNNKKAVGV 295

Query: 330 VHFLDLLR 337
           ++  D+L+
Sbjct: 296 INRQDVLK 303


>gi|258405823|ref|YP_003198565.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798050|gb|ACV68987.1| CBS domain containing membrane protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 148

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 52/139 (37%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              ++  V+   P+ +A   L E     V VVD+  +L GI+ + D+             
Sbjct: 8   MTTNVITVQKDTPIGEAAKKLLENHINGVPVVDDEGRLVGILCQSDLITQQKNFPLPTVF 67

Query: 273 --------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              + +   +VE  M  +P  +  DT L  A  L+   N   L 
Sbjct: 68  TILDGFIPLSSMGQMEKQVQKIAATTVEQAMTPDPITVTADTDLNQAASLMVDKNFHTLP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVD  +  +G++   D+L+
Sbjct: 128 VVD-GETLVGVLGKEDVLK 145



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 32/53 (60%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D+M  N   + +DT +  A + L +++I+ + VVDD  + +GI+   DL+
Sbjct: 3   TVADIMTTNVITVQKDTPIGEAAKKLLENHINGVPVVDDEGRLVGILCQSDLI 55


>gi|161528272|ref|YP_001582098.1| CBS domain-containing protein [Nitrosopumilus maritimus SCM1]
 gi|160339573|gb|ABX12660.1| CBS domain containing protein [Nitrosopumilus maritimus SCM1]
          Length = 605

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 46/119 (38%), Gaps = 3/119 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +  +  S   +    + ++       +A  +L       + V +E +   GI+T+ DI  
Sbjct: 10  SYVLNKSVTEYMDKDVLILSQNTLTREATRMLQHYETDDIIVTNEDRVPVGIVTDEDILS 69

Query: 275 NFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                        ++D+M      I E   L  A+  +R ++I  L V+    + IG++
Sbjct: 70  KVSDVTVYAEATKLKDIMTTPLVTINEKATLQDALHKMRDNSIRKLPVLSKKNQVIGMI 128



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 32/57 (56%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   SV + M K+  ++ ++TL   A ++L+ +    ++V ++ +  +GIV   D+L
Sbjct: 12  VLNKSVTEYMDKDVLILSQNTLTREATRMLQHYETDDIIVTNEDRVPVGIVTDEDIL 68


>gi|119715931|ref|YP_922896.1| CBS domain-containing protein [Nocardioides sp. JS614]
 gi|119536592|gb|ABL81209.1| CBS domain containing protein [Nocardioides sp. JS614]
          Length = 143

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 54/115 (46%), Gaps = 3/115 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNT 282
                +  +     + + I  L+E   G + V  +G  + GI++E D+ R+ H D  +  
Sbjct: 10  KPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRHLHSDGTVIN 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V+ +M    +   ++T +   M+ + +  +  + VV +  + +GI+   D+++
Sbjct: 70  NTVQAIMTTVVQTCDQETQVDELMKTMTERRVRHVPVV-EGGRLVGIISIGDVVK 123



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 41/120 (34%), Gaps = 4/120 (3%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFV 218
           VL      E    G       ++       +   ++ S   S +         +      
Sbjct: 6   VLKAKPSHEVITIGPDAGVRELIAKLAEHNVGALIVSSDGTSVDGIVSERDVVRHLHSDG 65

Query: 219 CASDVMHSGDSIPLVK---IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              +         +V+       + + +  ++E+R   V VV EG +L GII+ GD+ ++
Sbjct: 66  TVINNTVQAIMTTVVQTCDQETQVDELMKTMTERRVRHVPVV-EGGRLVGIISIGDVVKH 124


>gi|283471535|emb|CAQ50746.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus ST398]
          Length = 290

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 12/193 (6%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           ++      K+ +     LM N + +     +     R L+   + L           +++
Sbjct: 69  INISKYVPKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELND-------KTIDQ 121

Query: 60  IKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           I     R   + I G G S  + + L   L+  G     V         L     +D +I
Sbjct: 122 ICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVI 181

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +++ +G+  E+++++     + IP+I ITS   + VA  ++IVLT  K  +     +  T
Sbjct: 182 LITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGK-TDENEMHMGAT 240

Query: 177 TSAIMQLAIGDAL 189
           TS   Q+   D L
Sbjct: 241 TSLFAQMFTIDIL 253


>gi|228475515|ref|ZP_04060233.1| SIS domain protein [Staphylococcus hominis SK119]
 gi|228270297|gb|EEK11732.1| SIS domain protein [Staphylococcus hominis SK119]
          Length = 268

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 68/200 (34%), Gaps = 27/200 (13%)

Query: 1   MHFYFSHFKSVTRKGHSLM-------KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQF 53
           M F   H KS     ++ +         + +Q     I  EK  +  L  +L+      F
Sbjct: 66  MKFSLQHEKSEKSVENAPLIQLIHRYHQNIIQQTGEFISEEK--IKRLAHNLKTCRQVNF 123

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
                            G+G SG   S+        G        A        +++ +D
Sbjct: 124 ----------------AGLGSSGLTASEFYYRAMRMGIKGLVSTDAHQMKISASLLSSND 167

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           + + +S SG + EL      AR     ++ IT+   S +  +AD+VL      +S  +  
Sbjct: 168 MFVAISNSGETSELIDATKIARNQGAYVVVITNFEGSTITKNADLVLITS--AQSNNNDS 225

Query: 174 APTTSAIMQLAIGDALAIAL 193
               S I    + D ++  L
Sbjct: 226 RFINSQIATHFLLDLVSYIL 245


>gi|148642850|ref|YP_001273363.1| CBS-domain-containing protein [Methanobrevibacter smithii ATCC
           35061]
 gi|148551867|gb|ABQ86995.1| CBS-domain-containing protein [Methanobrevibacter smithii ATCC
           35061]
          Length = 130

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 9/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
                +++A   L E +   + VVD+  +L GIIT  D+  N   D   L   V+ +MIK
Sbjct: 19  PSNVDVVNAFEELMEHKISAMPVVDD-GELVGIITATDLGHNLILDKYELGTDVKSIMIK 77

Query: 292 NPKVILEDTLLTVAMQLLRQH----NI-SVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +  +  +  A+++++ H    NI + L VV +  K +GI+   D+++ 
Sbjct: 78  DVVTVSPENTIQEAIEIMQSHAPDSNILNQLPVV-ENGKLVGIISDGDIIKL 128



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    V+++M  +      +  +  A + L +H IS + VVDD  + +GI+   DL
Sbjct: 2   MLDKKVKEIMTTDVITTPSNVDVVNAFEELMEHKISAMPVVDD-GELVGIITATDL 56


>gi|73661682|ref|YP_300463.1| transcriptional regulator [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494197|dbj|BAE17518.1| putative transcriptional regulator [Staphylococcus saprophyticus
           subsp. saprophyticus ATCC 15305]
          Length = 265

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 30/144 (20%), Positives = 56/144 (38%), Gaps = 3/144 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             +    V +I   + +++  G+G SG   ++    +   G        A        ++
Sbjct: 105 DEKIQSFVNQIMRSR-QIIYAGLGSSGLSATEFYYRMMRMGLKGSVSTDAHQMKIFGSLL 163

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
           T  D  + +S SG + EL A    A      ++AIT+   S +   AD+VL      +S 
Sbjct: 164 TTSDTFLAISNSGETAELIAAAEVAHARGAYVVAITNYEGSTLTECADLVLIT--TDQSR 221

Query: 170 PHGLAPTTSAIMQLAIGDALAIAL 193
            +      + I  L + D ++  L
Sbjct: 222 INDSRFINTQIATLFLIDIVSYLL 245


>gi|51893768|ref|YP_076459.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Symbiobacterium thermophilum IAM 14863]
 gi|51857457|dbj|BAD41615.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Symbiobacterium thermophilum IAM 14863]
          Length = 376

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVIL 297
           + +A+  +  +R   V VVD   +L GI+T     R   + L +  ++ ++M      +L
Sbjct: 268 IAEAVATMRRRRVNSVLVVDGDGRLLGIVT----ARAVERGLASHRTLGEIMETRLTTVL 323

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               +T A+Q +    +  L VVD+  +  G+V 
Sbjct: 324 PHQPVTHAVQRMLLERLEFLPVVDEQGRLQGLVT 357



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 50/121 (41%), Gaps = 20/121 (16%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
            +     +V +   + +A+ +          VV +  ++  + +  ++ RN         
Sbjct: 183 QARLRKTVVFVTHDMDEALKLADR------IVVMKDGRIHQVASPEELLRNPKDEFVAQF 236

Query: 276 -----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  +   +L+V DVMI +P     +  +  A+  +R+  ++ ++VVD   + +GIV
Sbjct: 237 VGRQRMVRPAESLTVADVMIPDPVTAGPEYGIAEAVATMRRRRVNSVLVVDGDGRLLGIV 296

Query: 331 H 331
            
Sbjct: 297 T 297


>gi|154150471|ref|YP_001404089.1| Cl- channel, voltage-gated family protein [Candidatus Methanoregula
           boonei 6A8]
 gi|153999023|gb|ABS55446.1| Cl- channel, voltage-gated family protein [Methanoregula boonei
           6A8]
          Length = 612

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 42/98 (42%), Gaps = 3/98 (3%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
            I ++++       +V E   L GIIT  D+      +    ++ ++M   P VI  D  
Sbjct: 493 VIDLMAKTGHTGFPIV-EDGHLVGIITNRDVSAIRAAEKTCPTIREIMTFKPFVIHPDDT 551

Query: 302 LTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLLR 337
           L  A+ ++  H+   L VV        +G +   D+LR
Sbjct: 552 LEDALAIIVGHDFDHLPVVRKETPDMLVGFLTRSDVLR 589


>gi|152980858|ref|YP_001353867.1| hypothetical protein mma_2177 [Janthinobacterium sp. Marseille]
 gi|151280935|gb|ABR89345.1| Uncharacterized conserved protein [Janthinobacterium sp. Marseille]
          Length = 176

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 54/109 (49%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    P++DA+  ++EK  G + VV E   L G++T  ++    H +   + + SV   M
Sbjct: 42  VTPDSPMLDAVNAMAEKDIGSL-VVMEAGNLIGMLTFREVMATIHANGGAVGSDSVRRYM 100

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K+P  I  D  +    +L+ + +   + V+D  +  +G++ F D+ + 
Sbjct: 101 DKHPMTITSDAEINEVRRLMLEKHARYVPVLD-GKILVGVISFYDVAKA 148



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+ +  A+  + + +I  L+V++     IG++ F +++
Sbjct: 41  TVTPDSPMLDAVNAMAEKDIGSLVVMEAGN-LIGMLTFREVM 81


>gi|146318309|ref|YP_001198021.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
 gi|145689115|gb|ABP89621.1| hypothetical protein SSU05_0655 [Streptococcus suis 05ZYH33]
          Length = 122

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 49/110 (44%), Gaps = 14/110 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ E+    + V+ E  KL G++TEG I                +  L
Sbjct: 14  ISPDTTVAHAADIMREQDLHRLPVI-ENDKLVGLVTEGTIAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           N   V+DVMIKN   +     L  A  L+ ++ + +L VVD+  +  G++
Sbjct: 73  NKTKVKDVMIKNVITVSGYASLEDAAYLMYKNKVGILPVVDN-GQLYGVI 121



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M +    I  DT +  A  ++R+ ++  L V+++  K +G+V 
Sbjct: 1   MSVKDFMTRKVVYISPDTTVAHAADIMREQDLHRLPVIEND-KLVGLVT 48


>gi|6323585|ref|NP_013656.1| Imd4p [Saccharomyces cerevisiae S288c]
 gi|1708478|sp|P50094|IMDH4_YEAST RecName: Full=Probable inosine-5'-monophosphate dehydrogenase IMD4;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|577140|emb|CAA86719.1| putative inosine-5'-monophoshate dehydrogenase [Saccharomyces
           cerevisiae]
 gi|285813947|tpg|DAA09842.1| TPA: Imd4p [Saccharomyces cerevisiae S288c]
          Length = 524

 Score = 73.8 bits (180), Expect = 3e-11,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 12/188 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            +  V    K  +         +S +  +   D A+ +ALL    F  ++         +
Sbjct: 53  PSSAVSLQTKLTKKITLNTPFVSSPMDTVTEADMAIYMALLGGIGFIHHNCTPKEQASMV 112

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEG---QKLKGIITE 269
             + +  +  ++S     ++     + +   ++  K  F    V ++G    KL G++T 
Sbjct: 113 KKVKMFENGFINS---PIVISPTTTVGEV-KVMKRKFGFSGFPVTEDGKCPGKLVGLVTS 168

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI   F +D ++L V +VM KNP   ++   L    ++L+Q     L++VDD    + +
Sbjct: 169 RDI--QFLED-DSLVVSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSM 225

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 226 LSRADLMK 233


>gi|260684787|ref|YP_003216072.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           CD196]
 gi|260688445|ref|YP_003219579.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           R20291]
 gi|260210950|emb|CBA66205.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           CD196]
 gi|260214462|emb|CBE06926.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           R20291]
          Length = 596

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 51/139 (36%), Gaps = 7/139 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
               + GG           V          +     + DAI  + +     + V+D   +
Sbjct: 1   MRYYYKGGDFMFSIPEVKKVEEVMDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSDQ 60

Query: 263 LKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           LKGII+  DI      HK      V+ +M K+   + E   L     ++   NI +L V+
Sbjct: 61  LKGIISMTDIHNLYEMHKKYEGQPVKLIMKKDVIYVNEGLTLDECRDIMILKNIGILPVL 120

Query: 321 DDCQKAIGIV---HFLDLL 336
               K IG++   H  D L
Sbjct: 121 -RDNKIIGVLKQEHIRDYL 138


>gi|151946109|gb|EDN64340.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 524

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 12/188 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            +  V    K  +         +S +  +   D A+ +ALL    F  ++         +
Sbjct: 53  PSSAVSLQTKLTKKITLNTPFVSSPMDTVTEADMAIYMALLGGIGFIHHNCTPKEQASMV 112

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEG---QKLKGIITE 269
             + +  +  ++S     ++     + +   ++  K  F    V ++G    KL G++T 
Sbjct: 113 KKVKMFENGFINS---PIVISPTTTVGEV-KVMKRKFGFSGFPVTEDGKCPGKLVGLVTS 168

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI   F +D ++L V +VM KNP   ++   L    ++L+Q     L++VDD    + +
Sbjct: 169 RDI--QFLED-DSLVVSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSM 225

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 226 LSRADLMK 233


>gi|33519976|ref|NP_878808.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           floridanus]
 gi|33504322|emb|CAD83214.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           floridanus]
          Length = 489

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 40/208 (19%), Positives = 69/208 (33%), Gaps = 23/208 (11%)

Query: 143 AITSENKSVVACHADIVLTLPKEP------ESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           A+T ++ S+V   + +   LP E               P  SA M      +LAIAL + 
Sbjct: 9   ALTFDDVSIVPARSAV---LPVEAILKSNLTDSIILNIPIISAAMDTVTEASLAIALAQE 65

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFG 252
                     +H    L         V         +   V     +++         F 
Sbjct: 66  GGIG-----FVHKNMSLKNQINEVIRVKRYESGVVTNPQCVNPDTTVLEVKERTCRNGFA 120

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLR 310
              VV    +L GI+T  D+   F  DL ++ V DVM    +   + E       +  + 
Sbjct: 121 GYPVVINSNELVGIVTSRDVR--FVNDL-SIPVSDVMTPKDSLVTVYERESRETVLAKMH 177

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  +++VD      G++   D  + 
Sbjct: 178 DKRVEKILLVDSLFHLKGMITAKDFEKA 205


>gi|13475518|ref|NP_107082.1| hypothetical protein mll6611 [Mesorhizobium loti MAFF303099]
 gi|14026270|dbj|BAB52868.1| mll6611 [Mesorhizobium loti MAFF303099]
          Length = 232

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 51/135 (37%), Gaps = 27/135 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           +     + +A  ++  K+   + V+    +L GI++EGD  R                  
Sbjct: 14  IDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRGELGTERKRSRWLEFLV 73

Query: 280 -----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                       N   VE+VM ++         L   ++L+ + ++  +    +  K +G
Sbjct: 74  TPGRAADEYVRANGRRVEEVMSQDVVTASPAASLAKVVELMTRRHVKRIPAT-EGGKVVG 132

Query: 329 IVHFLDLLRF--GII 341
           I+   DLLR   G++
Sbjct: 133 IITRSDLLRALLGVL 147



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  E +M K    I     +  A  L+    +S L V+ +  + +GIV   D LR G
Sbjct: 1   MQAEAIMSKPVVGIDPSASIAEAAGLMLSKKVSGLPVIRNDGRLVGIVSEGDFLRRG 57


>gi|315504077|ref|YP_004082964.1| signal transduction protein with cbs domains [Micromonospora sp.
           L5]
 gi|315410696|gb|ADU08813.1| putative signal transduction protein with CBS domains
           [Micromonospora sp. L5]
          Length = 138

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKN 292
              LI A   + +   G V V D    + GI+T+ DI  R   ++++     +  +  K+
Sbjct: 18  NDTLIAAAQEMRDSAIGDVVVTDGDN-VVGIVTDRDIAVRGVAENMDPTATRLNQITSKD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + ++     A  L+R + +  L VVDD  + +G++   DL
Sbjct: 77  VVTVSQNDDAVAAADLMRTYAVRRLPVVDD-GRLVGLISMGDL 118



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M      +  +  L  A Q +R   I  ++V D     +GIV   D+   G+
Sbjct: 2   TTVGEFMTTRLVTMDGNDTLIAAAQEMRDSAIGDVVVTDGDN-VVGIVTDRDIAVRGV 58


>gi|283785590|ref|YP_003365455.1| hex-regulon repressor (RpiR-family transcriptional regulator)
           [Citrobacter rodentium ICC168]
 gi|282949044|emb|CBG88647.1| putative hex-regulon repressor (RpiR-family transcriptional
           regulator) [Citrobacter rodentium ICC168]
          Length = 293

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVESYTGKIFESAMATLDHVRQSLDKT---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|170751951|ref|YP_001758211.1| CBS domain-containing protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170658473|gb|ACB27528.1| CBS domain containing membrane protein [Methylobacterium
           radiotolerans JCM 2831]
          Length = 392

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 52/156 (33%), Gaps = 23/156 (14%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
                       G      +        +  V    PL +A+ +L   R   + V DEG 
Sbjct: 214 EQILRRVQMRVYGRRSGPITCAAIMSRDVIAVAPDAPLSEAMRLLRRHRIKALPVTDEGA 273

Query: 262 KLKGIITEGDIFRNFHKDLNTLS--------------------VEDVMIK-NPKVILEDT 300
           ++ GI+T+ D+      D N                         D+M    P  +  DT
Sbjct: 274 RVLGIVTQTDLLDKAAWDRNGPRLGLGRRLRLTAERGRAPHGCAADIMSAVEP--VGPDT 331

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   +  + +  +  L VVD   + +GIV   DL+
Sbjct: 332 PVAALVPRMSEAGLHHLPVVDTDGRLVGIVSQTDLI 367



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    P+   +  +SE     + VVD   +L GI+++ D+    
Sbjct: 327 VGPDTPVAALVPRMSEAGLHHLPVVDTDGRLVGIVSQTDLIPAL 370


>gi|148264366|ref|YP_001231072.1| CBS domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146397866|gb|ABQ26499.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
          Length = 150

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 55/139 (39%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
               +  VK G  + +   + +  R     VVD+  +L GI+TE D+             
Sbjct: 8   MTKDVITVKTGTTVRELAELFTANRMSSFPVVDDNGELIGIVTETDLIEQDKSLHIPTVI 67

Query: 275 ----------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              K +   +V D+  ++ + +   +LL+    ++    I  + 
Sbjct: 68  SLFDWVIYLESEKKFEKELKKMTGQTVGDIYTEDVESVKSTSLLSEVADIMSSKKIHAVP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVDD +K +G++  +DL+R
Sbjct: 128 VVDD-KKLVGVISRIDLIR 145



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+  DVM K+   +   T +    +L   + +S   VVDD  + IGIV   DL+
Sbjct: 2   LTAADVMTKDVITVKTGTTVRELAELFTANRMSSFPVVDDNGELIGIVTETDLI 55



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           VK    L +   I+S K+   V VVD+  KL G+I+  D+ R  
Sbjct: 105 VKSTSLLSEVADIMSSKKIHAVPVVDDK-KLVGVISRIDLIRTM 147


>gi|27468298|ref|NP_764935.1| hypothetical protein SE1380 [Staphylococcus epidermidis ATCC 12228]
 gi|57867210|ref|YP_188841.1| CBS domain-containing protein [Staphylococcus epidermidis RP62A]
 gi|251811098|ref|ZP_04825571.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|282875874|ref|ZP_06284741.1| DRTGG domain protein [Staphylococcus epidermidis SK135]
 gi|293366349|ref|ZP_06613028.1| CBS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|27315844|gb|AAO04979.1|AE016748_213 conserved hypothetical protein [Staphylococcus epidermidis ATCC
           12228]
 gi|57637868|gb|AAW54656.1| CBS domain protein [Staphylococcus epidermidis RP62A]
 gi|251805395|gb|EES58052.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           BCM-HMP0060]
 gi|281294899|gb|EFA87426.1| DRTGG domain protein [Staphylococcus epidermidis SK135]
 gi|291319474|gb|EFE59841.1| CBS domain protein [Staphylococcus epidermidis M23864:W2(grey)]
 gi|329724692|gb|EGG61198.1| DRTGG domain protein [Staphylococcus epidermidis VCU144]
 gi|329733797|gb|EGG70123.1| DRTGG domain protein [Staphylococcus epidermidis VCU045]
 gi|329737460|gb|EGG73714.1| DRTGG domain protein [Staphylococcus epidermidis VCU028]
          Length = 432

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
             K+    +   D++   + + ++     + D   I +E       +V+E  KL GI+T 
Sbjct: 180 NQKIRKEILVVEDIVKPINELSVLFDSMTIHDYKKIANETGHTRFPIVNEEFKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I     +DL       VM KNP  +     +     LL    I +L V D+ +KA+G+
Sbjct: 240 REIINMNEEDLL----GKVMTKNPLSVKLTNTVASCAHLLIWEGIELLPVTDNNKKAVGV 295

Query: 330 VHFLDLLR 337
           ++  D+L+
Sbjct: 296 INRQDVLK 303


>gi|81427911|ref|YP_394910.1| gluconate operon transcriptional regulator [Lactobacillus sakei
           subsp. sakei 23K]
 gi|78609552|emb|CAI54598.1| Gluconate operon transcriptional regulator, RpiR family
           [Lactobacillus sakei subsp. sakei 23K]
          Length = 280

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 65/170 (38%), Gaps = 4/170 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L+++       Q   AV  I      + + G+G SG +          T  P+ F    
Sbjct: 106 ALKATWSLLTEEQLQKAVALINRAH-LLSLFGLGASGIVAQDGYHKFLRTSIPTVFNQDY 164

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    +T  D  I++S SG + +   +    +   +PLI ITS   S +A   DI 
Sbjct: 165 HLQLMQATKLTNQDCAIIISHSGQNKDALELARILKERQVPLIVITSFGNSSLAKLGDIT 224

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF-SENDFYVLH 208
           L    E  +         + I Q+++ D+L + +  +    +E  F  + 
Sbjct: 225 LLSISEETNYRAEAL--HALIAQISLIDSLFMMVAVNNGQETEQSFKEIR 272


>gi|212543497|ref|XP_002151903.1| IMP dehydrogenase, putative [Penicillium marneffei ATCC 18224]
 gi|210066810|gb|EEA20903.1| IMP dehydrogenase, putative [Penicillium marneffei ATCC 18224]
          Length = 545

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P          AP  S+ M       +AI +            V+H       
Sbjct: 67  SDVTLDTPVTKRISL--KAPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCSAED 119

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V            ++     + +A  + S   FG   V + G    KL GI+T
Sbjct: 120 QAEMVRKVKRYENGFILDPVVISPKTTVAEAKELKSTWGFGGFPVTENGTLRSKLVGIVT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +     +   V +VM  +       T L  A ++LR      L +VD     + 
Sbjct: 180 SRDIQFHTS---DEDPVTEVMSTDLVTAPAGTTLAEANEVLRNSKKGKLPIVDKDGNLVS 236

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 237 LLSRSDLRK 245



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VD+   L  +++  D+ +N H
Sbjct: 205 PAGTTLAEANEVLRNSKKGKLPIVDKDGNLVSLLSRSDLRKNLH 248


>gi|92117436|ref|YP_577165.1| signal-transduction protein [Nitrobacter hamburgensis X14]
 gi|91800330|gb|ABE62705.1| putative signal-transduction protein with CBS domains [Nitrobacter
           hamburgensis X14]
          Length = 231

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------- 277
           V   C +IDA+ +L E     + VVD    L  I++EGD  R                  
Sbjct: 20  VAPDCRVIDAVRLLMETNRRGLPVVDSSGILVRIVSEGDFLRRVELGTVPTDRPWFDAFF 79

Query: 278 ---------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                          SV+++M ++P  +  D  LT A+ L+   +++ + VV +    +G
Sbjct: 80  GAGESATAFARAYGRSVDEIMTQDPVCVAPDADLTEAIALMESRHVAQIPVVFE-GAVLG 138

Query: 329 IVHFLDLLRF 338
           ++   +LL  
Sbjct: 139 MISKTELLAA 148



 Score = 43.7 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   +VM      +  D  +  A++LL + N   L VVD     + IV   D LR
Sbjct: 7   MKASEVMRSPAVSVAPDCRVIDAVRLLMETNRRGLPVVDSSGILVRIVSEGDFLR 61


>gi|56964494|ref|YP_176225.1| transcriptional regulator [Bacillus clausii KSM-K16]
 gi|56910737|dbj|BAD65264.1| transcriptional regulator [Bacillus clausii KSM-K16]
          Length = 435

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
                   VVDE  +++G+IT  D+   F K  + L +E VM  +P  + E T +     
Sbjct: 219 RTGHSRYPVVDEAMRVQGMITAKDV---FDKPKHWL-IEKVMTGDPITVNERTSIAAVAH 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+    I +L VVD  +K IG+V   D+L+ 
Sbjct: 275 LMVWQGIELLPVVDQQRKLIGVVSRQDVLKA 305



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 31/119 (26%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
                  V     +     ++  +    + VVD+ +KL G+++  D+ +           
Sbjct: 256 MTGDPITVNERTSIAAVAHLMVWQGIELLPVVDQQRKLIGVVSRQDVLKALQTTQRQPHV 315

Query: 284 --SVEDV-----------------------MIKNPKVILED---TLLTVAMQL-LRQHN 313
             ++E++                       M  +   +      TL+  A +  +R+H 
Sbjct: 316 GETIEEIVTSRMEEKRSGNELLFTCDITPQMTDHVGTVSYGVVMTLMVEAARRTMRKHK 374


>gi|87120301|ref|ZP_01076196.1| acetoin utilization protein AcuB, putative [Marinomonas sp. MED121]
 gi|86164404|gb|EAQ65674.1| acetoin utilization protein AcuB, putative [Marinomonas sp. MED121]
          Length = 128

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 56/123 (45%), Gaps = 14/123 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------N 275
              S   V++   L +   +L E  F  + V+D G +L GII++ DI R           
Sbjct: 1   MKKSPVCVEMDTRLEEVRRLLEEHGFHHLPVLD-GDELVGIISDRDILRLVSPFLDTAGE 59

Query: 276 FHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +DL     +   VM + P  +  D  L   +  + + +IS + V+D+  + +GI+ + 
Sbjct: 60  MERDLEVLNKAAHQVMTRQPICVSLDDSLNTVIDWMTKVSISCIPVLDN-GQLVGIITWR 118

Query: 334 DLL 336
           DL+
Sbjct: 119 DLV 121



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K+P  +  DT L    +LL +H    L V+D  +  +GI+   D+LR 
Sbjct: 1   MKKSPVCVEMDTRLEEVRRLLEEHGFHHLPVLDGDE-LVGIISDRDILRL 49


>gi|325689162|gb|EGD31169.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK115]
          Length = 280

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            A++     + +TS N   +    D ++ +  +          
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNIS 234


>gi|259148522|emb|CAY81767.1| Imd4p [Saccharomyces cerevisiae EC1118]
          Length = 524

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 79/188 (42%), Gaps = 12/188 (6%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            +  V    K  +         +S +  +   D A+ +ALL    F  ++         +
Sbjct: 53  PSSAVSLQTKLTKKITLNTPFVSSPMDTVTEADMAIYMALLGGIGFIHHNCTPKEQASMV 112

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEG---QKLKGIITE 269
             + +  +  ++S     ++     + +   ++  K  F    V ++G    KL G++T 
Sbjct: 113 KKVKMFENGFINS---PIVISPTTTVGEV-KVMKRKFGFSGFPVTEDGKCPGKLVGLVTS 168

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI   F +D ++L V +VM KNP   ++   L    ++L+Q     L++VDD    + +
Sbjct: 169 RDI--QFLED-DSLVVSEVMTKNPVTGIKGITLKEGNEILKQTKKGKLLIVDDNGNLVSM 225

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 226 LSRADLMK 233


>gi|190892122|ref|YP_001978664.1| inosine-5'-monophosphate dehydrogenase [Rhizobium etli CIAT 652]
 gi|190697401|gb|ACE91486.1| putative inosine-5'-monophosphate dehydrogenase protein [Rhizobium
           etli CIAT 652]
          Length = 145

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 3/117 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT 282
                + +      L +   ++     G + V  E  +L G+IT+ DI            
Sbjct: 6   CMTTDVQITDPDQTLREVAAMMGRLDAGALPV-AENDRLVGMITDRDITIRGVAEGKGPD 64

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V DVM  + K   +D  L   +  +    +  L V++  ++ +GI+   DL   G
Sbjct: 65  AKVRDVMSTDVKYCFDDEDLEDVLHNMGDLQVRRLPVLNRSKRLVGIISLGDLAMKG 121



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V + M  + ++   D  L     ++ + +   L V ++  + +G++   D+   G+
Sbjct: 1   MKVSNCMTTDVQITDPDQTLREVAAMMGRLDAGALPVAEND-RLVGMITDRDITIRGV 57


>gi|160286243|pdb|2YZI|A Chain A, Crystal Structure Of Uncharacterized Conserved Protein
           From Pyrococcus Horikoshii
 gi|160286244|pdb|2YZI|B Chain B, Crystal Structure Of Uncharacterized Conserved Protein
           From Pyrococcus Horikoshii
          Length = 138

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL-NTLSVEDVMI 290
           VK    + +A  +  E   G + V+++   + G  T+ D I R     L   + VE +  
Sbjct: 20  VKPSTSVQEASRLXXEFDVGSLVVINDDGNVVGFFTKSDIIRRVIVPGLPYDIPVERIXT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +N      +T L   ++   +H I  +++ ++  K +GI    DLL  
Sbjct: 80  RNLITANVNTPLGEVLRKXAEHRIKHILI-EEEGKIVGIFTLSDLLEA 126



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/60 (18%), Positives = 26/60 (43%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++    K    +   T +  A +L  + ++  L+V++D    +G     D++R  I+
Sbjct: 6   KAPIKVYXTKKLLGVKPSTSVQEASRLXXEFDVGSLVVINDDGNVVGFFTKSDIIRRVIV 65


>gi|126179865|ref|YP_001047830.1| signal transduction protein [Methanoculleus marisnigri JR1]
 gi|125862659|gb|ABN57848.1| putative signal transduction protein with CBS domains
           [Methanoculleus marisnigri JR1]
          Length = 293

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 2/99 (2%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILE 298
            DA+ + +        V+ +G  L GI+T  DI R   + L     V  VM  +      
Sbjct: 191 RDAVRLFNAHHIHGAPVLKDGGDLAGIVTLSDIVRGLDEGLTLDAPVAGVMTADVVEAPS 250

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              L   +   ++  I  L+VV +  K +GIV   D++R
Sbjct: 251 TIRLYELVGRFKEREIGRLIVV-EDGKPVGIVTQTDIIR 288



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 23/58 (39%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    ++  M      +     L  A++L   H+I    V+ D     GIV   D++R
Sbjct: 168 LPKQPIKHYMSTPLLTLPLTATLRDAVRLFNAHHIHGAPVLKDGGDLAGIVTLSDIVR 225


>gi|26450828|dbj|BAC42522.1| unknown protein [Arabidopsis thaliana]
          Length = 295

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 4/100 (4%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVMIKNPKVILEDT 300
             + E + G   V+ E  KL GI+T  D + R   ++L   T +VE VM  NP+    D 
Sbjct: 1   MKMVEYQSGAAMVMVEN-KLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDM 59

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  A+ ++       L V+D     + ++  + +    +
Sbjct: 60  AIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 99


>gi|326389324|ref|ZP_08210892.1| transcriptional regulator, RpiR family [Thermoanaerobacter
           ethanolicus JW 200]
 gi|325994687|gb|EGD53111.1| transcriptional regulator, RpiR family [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 282

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/198 (18%), Positives = 70/198 (35%), Gaps = 7/198 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEK 59
           +    S  K   +    +  +  V   ++ I    K+ + +  S L  +       AV+ 
Sbjct: 69  IKIAVSLSKQTKKLDGGITDDDDVSDVIQKIANFNKQAIDNTISLLDVK---SIIKAVDA 125

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+  SG +        +    P                + + D+   +S
Sbjct: 126 LSNA-NKIDFYGVAASGTVAYDAMLKFSRINIPCTAYQDTHLQLTSAANLKKGDVAFGIS 184

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SG + E+   L  A+      I++T   +  +   ADI L +  E      G   T S 
Sbjct: 185 YSGCTREIVEALEVAKEAGATTISLTKFGQFPLVKVADINLFVSSEEPLFRSGA--TASR 242

Query: 180 IMQLAIGDALAIALLESR 197
           I QL + D L I + + +
Sbjct: 243 IAQLNVIDILFILVAKRK 260


>gi|315426567|dbj|BAJ48197.1| signal-transduction protein [Candidatus Caldiarchaeum subterraneum]
          Length = 152

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTL--SVEDV 288
           +V  G  + +A  ++     G + V  E  KL GI TE D + R     L+     V DV
Sbjct: 13  VVDAGITVREAAILMDRLDTGYLLVKSED-KLVGIFTERDAVRRVLATGLDHTRTKVADV 71

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M      +  DT +  A+ L+  H    L VV    +  G+V   +  R 
Sbjct: 72  MSFPVIGVSPDTSVEDAVVLMAMHGFRRLPVVSKEGRLEGVVTITEAARA 121



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V     + DA+ +++   F  + VV +  +L+G++T  +  R         +VE++
Sbjct: 79  VSPDTSVEDAVVLMAMHGFRRLPVVSKEGRLEGVVTITEAARALAS--MQKTVEEL 132


>gi|262039677|ref|ZP_06012966.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
 gi|261746294|gb|EEY33844.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
          Length = 290

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 3/154 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +LE +L+      +  A++ I      + I G+G SG IG+  AS L   G       
Sbjct: 114 IKALEETLKFLNYEIYEEAIKLITNANT-IDIYGVGNSGSIGNDFASKLLRIGLNCRAYP 172

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + + DL I +S SG + +    L  A+      + +T+   S++  +AD
Sbjct: 173 DNHLQQLCACHLGKKDLAIAISHSGETKDTVDALRIAKESGAKTLVLTNFKASIITKYAD 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           I L       +        +S + QLA+ D L +
Sbjct: 233 ISLFTGDTESTFYSET--MSSRMSQLALVDMLYM 264


>gi|220935686|ref|YP_002514585.1| signal transduction protein [Thioalkalivibrio sp. HL-EbGR7]
 gi|219996996|gb|ACL73598.1| signal transduction protein [Thioalkalivibrio sp. HL-EbGR7]
          Length = 161

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 29/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
                  V    P+   I +L  +    V VVD    L G++T GD+             
Sbjct: 7   MTPEPITVAPETPVAQVIALLVSQGVNGVPVVDASGALLGMVTSGDLIHRLADERLEPHS 66

Query: 277 ---------------HKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                          H+D        +   VM ++   +  +  + VA +LL  H +  L
Sbjct: 67  SLWRESFYRSVFSAAHRDAPDPAEGATAAQVMSRDTVCVAPEDDMVVAARLLIAHGVKSL 126

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+ +  + +G++  +DLLR
Sbjct: 127 PVL-EAGRLVGMISRMDLLR 145



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M   P  +  +T +   + LL    ++ + VVD     +G+V   DL+
Sbjct: 3   VRDLMTPEPITVAPETPVAQVIALLVSQGVNGVPVVDASGALLGMVTSGDLI 54


>gi|289191584|ref|YP_003457525.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938034|gb|ADC68789.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
          Length = 273

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 7/127 (5%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +  + +      +    +  V     + D I +L E       VV E  KL GI++  DI
Sbjct: 5   VMGVIMSVKVSEYMTKKVVTVSKDNTVKDVIKLLRETGHNSFPVV-ENGKLIGIVSVHDI 63

Query: 273 FRNFHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                KD N   VE+VM K     V   D  +    +++ +   S L VVD+    +GI+
Sbjct: 64  ---VGKDDNE-KVENVMTKREDMVVTTPDANIMDVGRIMFRTGFSKLPVVDEENNLVGII 119

Query: 331 HFLDLLR 337
             +D++R
Sbjct: 120 SNMDVIR 126


>gi|146339957|ref|YP_001205005.1| hypothetical protein BRADO2961 [Bradyrhizobium sp. ORS278]
 gi|146192763|emb|CAL76768.1| conserved hypothetical protein with 2 CBS domains [Bradyrhizobium
           sp. ORS278]
          Length = 142

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V+    L +A  +L++++ G V V+  G +++GI++E DI R+  +      T  V  VM
Sbjct: 17  VEAQTTLAEAAKLLADRKIGAVLVM-SGTRMEGILSERDIVRSLGERGAGALTEPVSSVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +          +   M+++       L V+ +    +G++   D++++ +
Sbjct: 76  TRRVVSCRPQDTVAEIMEMMTNGKFRHLPVI-EGGLVVGLISIGDVVKWRV 125


>gi|320141647|gb|EFW33482.1| DRTGG domain protein [Staphylococcus aureus subsp. aureus MRSA131]
          Length = 432

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 20/216 (9%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           ELK IL Y        + I    +      +     I++T   +P +            +
Sbjct: 104 ELKDILKYI---GPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVINFVNEHDLPV 160

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             +  D   +A + ++        + +   K+    +   D+M   D + ++     + D
Sbjct: 161 LSSSYDTFLVANIINK-------ALFNQ--KIRKDILIVQDIMTPLDDLSVLFDTMKIAD 211

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
              + +        VV+E  KL GI+T     R      +   ++ VM +NP  +   + 
Sbjct: 212 YKRMANRTGHTRFPVVNESYKLVGIVT----SREMINTKDDDEIDKVMTRNPIYVNAMST 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     ++    I ++ VV   +K +G+++  D+L+
Sbjct: 268 VASCAHMMIWEGIELIPVVSSNKKTVGVINRQDVLK 303


>gi|307327768|ref|ZP_07606952.1| transcriptional regulator, RpiR family [Streptomyces violaceusniger
           Tu 4113]
 gi|306886666|gb|EFN17668.1| transcriptional regulator, RpiR family [Streptomyces violaceusniger
           Tu 4113]
          Length = 303

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/165 (23%), Positives = 67/165 (40%), Gaps = 5/165 (3%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E++ L+   + L    + Q   AV  +   + R+ + G+G S  +G  L   L   G 
Sbjct: 117 REEQQCLADTAAVLD---AGQVEAAVSALATAR-RIDVYGVGASSLVGQDLVQKLLRIGL 172

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +        +  +   +   D+ I ++ SG + ++   L  A       +AIT      
Sbjct: 173 IAHAHADPHLAVTNAVQLHSGDVAIAITHSGRTTDVIEPLRVAFERGATTVAITGRPDGE 232

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           VA +AD+VLT     ES     A  +S   QL + D L I + + 
Sbjct: 233 VAQYADLVLTTSTARESE-LRPAAMSSRTSQLLVVDCLFIGVAQR 276


>gi|74317770|ref|YP_315510.1| inosine-5'-monophosphate dehydrogenase [Thiobacillus denitrificans
           ATCC 25259]
 gi|74057265|gb|AAZ97705.1| IMP dehydrogenase [Thiobacillus denitrificans ATCC 25259]
          Length = 486

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 59/171 (34%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIAL +          ++H            + V         
Sbjct: 40  NLPLLSAAMDTVTEARLAIALAQEGGIG-----IVHKNMNTAMQAAQVAAVKRFESGVVK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     +   + I   KR   + V+ E  ++ GI+T  D+     +      V  +
Sbjct: 95  DPITVAPQMTVRQVLEITRAKRISGLPVI-EDGRVVGIVTNRDLRF---ESRLDQPVSAI 150

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        + E      AM LL +H +  ++VV+D  +  G++   D+ +
Sbjct: 151 MTPKERLVTVKEGANRDEAMALLHKHRLERVLVVNDDFELRGLITVKDIQK 201


>gi|1684732|emb|CAA98155.1| membrane protein [Pseudomonas stutzeri]
          Length = 378

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 48/115 (41%), Gaps = 11/115 (9%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----------KDLNTL 283
               +  A + L   R   + VV + ++L GI+T  D+ ++FH           K L   
Sbjct: 253 PDTFIEQAWSTLQRNRLRSLPVVSDSRELVGIVTLVDLLKHFHPRPGRLNFGQLKFLRGT 312

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +M      +  DT +   + LL    +  L VVD  ++ +G++   DL+  
Sbjct: 313 KLRAIMSSPVVSVTADTHMVELVYLLSDRGLHCLPVVDAQRRLVGMITQTDLIAA 367



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 37/79 (46%), Gaps = 8/79 (10%)

Query: 267 ITEGDIFR--------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +T  D+ R           + +  ++  D+  ++      DT +  A   L+++ +  L 
Sbjct: 214 VTRDDLERLIKQTEKHALRRSMGEVTAADITSRDVYSHTPDTFIEQAWSTLQRNRLRSLP 273

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV D ++ +GIV  +DLL+
Sbjct: 274 VVSDSRELVGIVTLVDLLK 292



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 37/76 (48%), Gaps = 3/76 (3%)

Query: 208 HPGGKL-GTLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            PG    G L       + +  S P+V       +++ + +LS++   C+ VVD  ++L 
Sbjct: 297 RPGRLNFGQLKFLRGTKLRAIMSSPVVSVTADTHMVELVYLLSDRGLHCLPVVDAQRRLV 356

Query: 265 GIITEGDIFRNFHKDL 280
           G+IT+ D+    +++ 
Sbjct: 357 GMITQTDLIAALYRNW 372


>gi|15925305|ref|NP_372839.1| RpiR family transcription regulator [Staphylococcus aureus subsp.
           aureus Mu50]
 gi|15927895|ref|NP_375428.1| hypothetical protein SA2108 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21283965|ref|NP_647053.1| hypothetical protein MW2236 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49484531|ref|YP_041755.1| transcription regulator [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|49487098|ref|YP_044319.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57650857|ref|YP_187115.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus COL]
 gi|82751908|ref|YP_417649.1| transcriptional regulator [Staphylococcus aureus RF122]
 gi|88196232|ref|YP_501051.1| hypothetical protein SAOUHSC_02589 [Staphylococcus aureus subsp.
           aureus NCTC 8325]
 gi|148268752|ref|YP_001247695.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus JH9]
 gi|150394819|ref|YP_001317494.1| RpiR family transcripitonal regulator [Staphylococcus aureus subsp.
           aureus JH1]
 gi|151222429|ref|YP_001333251.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156980630|ref|YP_001442889.1| hypothetical protein SAHV_2299 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|161510510|ref|YP_001576169.1| transcriptional regulator [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221141249|ref|ZP_03565742.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253314656|ref|ZP_04837869.1| transcriptional regulator [Staphylococcus aureus subsp. aureus str.
           CF-Marseille]
 gi|253729984|ref|ZP_04864149.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253734273|ref|ZP_04868438.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|255007092|ref|ZP_05145693.2| transcriptional regulator [Staphylococcus aureus subsp. aureus
           Mu50-omega]
 gi|269203945|ref|YP_003283214.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|284025339|ref|ZP_06379737.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 132]
 gi|294848853|ref|ZP_06789598.1| transcription regulator [Staphylococcus aureus A9754]
 gi|295404996|ref|ZP_06814809.1| transcription regulator [Staphylococcus aureus A8819]
 gi|296276320|ref|ZP_06858827.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MR1]
 gi|297209869|ref|ZP_06926265.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297244054|ref|ZP_06927944.1| transcription regulator [Staphylococcus aureus A8796]
 gi|297589613|ref|ZP_06948254.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|300910880|ref|ZP_07128330.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|304379503|ref|ZP_07362238.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|13702115|dbj|BAB43407.1| SA2108 [Staphylococcus aureus subsp. aureus N315]
 gi|14248089|dbj|BAB58477.1| similar to transcription regulator RpiR family [Staphylococcus
           aureus subsp. aureus Mu50]
 gi|21205407|dbj|BAB96101.1| MW2236 [Staphylococcus aureus subsp. aureus MW2]
 gi|49242660|emb|CAG41381.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|49245541|emb|CAG44019.1| putative transcription regulator [Staphylococcus aureus subsp.
           aureus MSSA476]
 gi|57285043|gb|AAW37137.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus COL]
 gi|82657439|emb|CAI81881.1| probable transcriptional regulator [Staphylococcus aureus RF122]
 gi|87203790|gb|ABD31600.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
           NCTC 8325]
 gi|147741821|gb|ABQ50119.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus JH9]
 gi|149947271|gb|ABR53207.1| helix-turn-helix protein RpiR [Staphylococcus aureus subsp. aureus
           JH1]
 gi|150375229|dbj|BAF68489.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. Newman]
 gi|156722765|dbj|BAF79182.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|160369319|gb|ABX30290.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|253726197|gb|EES94926.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus USA300_TCH959]
 gi|253727767|gb|EES96496.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TCH130]
 gi|262076235|gb|ACY12208.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ED98]
 gi|269941901|emb|CBI50312.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus TW20]
 gi|285817978|gb|ADC38465.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           04-02981]
 gi|294824232|gb|EFG40656.1| transcription regulator [Staphylococcus aureus A9754]
 gi|294969941|gb|EFG45959.1| transcription regulator [Staphylococcus aureus A8819]
 gi|296885542|gb|EFH24479.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|297178832|gb|EFH38077.1| transcription regulator [Staphylococcus aureus A8796]
 gi|297578124|gb|EFH96837.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus MN8]
 gi|298695574|gb|ADI98796.1| probable transcriptional regulator [Staphylococcus aureus subsp.
           aureus ED133]
 gi|300887860|gb|EFK83055.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|302333948|gb|ADL24141.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|302752186|gb|ADL66363.1| phosphosugar-binding transcriptional regulator RpiR family protein
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304342035|gb|EFM07939.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus ATCC BAA-39]
 gi|312437271|gb|ADQ76342.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus TCH60]
 gi|312830661|emb|CBX35503.1| helix-turn-helix domain, rpiR family protein [Staphylococcus aureus
           subsp. aureus ECT-R 2]
 gi|315129599|gb|EFT85590.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|315193575|gb|EFU23971.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS00]
 gi|315198147|gb|EFU28478.1| RpiR family transcriptional regulator [Staphylococcus aureus subsp.
           aureus CGS01]
 gi|320140144|gb|EFW32003.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA131]
 gi|320143414|gb|EFW35195.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus MRSA177]
 gi|329315001|gb|AEB89414.1| Transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus T0131]
 gi|329723419|gb|EGG59948.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21172]
 gi|329728138|gb|EGG64578.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21189]
 gi|329730432|gb|EGG66822.1| transcriptional regulator, RpiR family [Staphylococcus aureus
           subsp. aureus 21193]
          Length = 290

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 12/193 (6%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           ++      K+ +     LM N + +     +     R L+   + L           +++
Sbjct: 69  INISKYVPKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELND-------KTIDQ 121

Query: 60  IKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           I     R   + I G G S  + + L   L+  G     V         L     +D +I
Sbjct: 122 ICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVI 181

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +++ +G+  E+++++     + IP+I ITS   + VA  ++IVLT  K  +     +  T
Sbjct: 182 LITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGK-TDENEMHMGAT 240

Query: 177 TSAIMQLAIGDAL 189
           TS   Q+   D L
Sbjct: 241 TSLFAQMFTIDIL 253


>gi|326793642|ref|YP_004311462.1| inosine-5'-monophosphate dehydrogenase [Marinomonas mediterranea
           MMB-1]
 gi|326544406|gb|ADZ89626.1| inosine-5'-monophosphate dehydrogenase [Marinomonas mediterranea
           MMB-1]
          Length = 490

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 67/171 (39%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIAL +         +  +     ++  +    S ++      
Sbjct: 41  NIPLVSAAMDTVTEHRMAIALAQEGGIGIIHKNLTIEEQSAEVRRVKKFESGIVR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + + + S      V VV EG  L GI+T  D+   F KD +  +V D+M 
Sbjct: 98  VTINPSASVRELMNLTSAHNISGVPVV-EGNDLVGIVTSRDVR--FVKDFDQ-TVADIMT 153

Query: 291 K--NPKVILED-TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  I E+        ++L +H I  ++VV+D  +  G++   D+ + 
Sbjct: 154 PKERLVTIEEENASQGRVRKMLHEHRIEKVLVVNDKFELRGMMTVTDINKA 204


>gi|323499175|ref|ZP_08104153.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
 gi|323315808|gb|EGA68841.1| hypothetical protein VISI1226_10947 [Vibrio sinaloensis DSM 21326]
          Length = 629

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 61/162 (37%), Gaps = 24/162 (14%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGD------------SIPLVKIGCPLIDAITILS 247
           ++  F           L    S      D              P +     + +A   ++
Sbjct: 118 TQEVFADFVEVEDNARLRQAVSSTNEQNDLTTSKVRTLLTGEAPYIDQSESIQNAAIKMA 177

Query: 248 EKRFGCVAVV---------DEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVI 296
           E+    + ++         D+   L GIIT+ D+  R   + L+ + +V  VM      +
Sbjct: 178 EENVSSLLIINPDVLEDDEDDHSPLVGIITDRDLCTRVLAQGLDPSDNVSSVMTTEVISL 237

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  +  AM  + ++N+  L V+   ++ IGI+   D++R+
Sbjct: 238 DHNAYVYEAMLTMLRYNVHHLPVL-KDKQPIGIIEATDIVRY 278


>gi|319947189|ref|ZP_08021423.1| CBS domain protein [Streptococcus australis ATCC 700641]
 gi|319747237|gb|EFV99496.1| CBS domain protein [Streptococcus australis ATCC 700641]
          Length = 212

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 51/116 (43%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKD 279
            +V+    S  LV     + DAI  L       + V+DEG+ L GI++  D+ R   +  
Sbjct: 75  KEVVEIMTSPVLVTHDSYIQDAIITLFMYDADVLYVIDEGKLLLGIMSRKDLLRASLNSS 134

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           + T  V   M + P      +D  +  A  LL+ H I  L VVD+    K +G V 
Sbjct: 135 IQTTPVAVCMTRMPHIITCTKDMNILEAAALLQDHAIDSLPVVDEENDRKIVGTVT 190



 Score = 39.5 bits (91), Expect = 0.66,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFQKEVVEIMT-SPVLVTHDSYIQDAIITLFMYDADVLYVIDEGKLLLGIM 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|120436250|ref|YP_861936.1| hypothetical protein GFO_1904 [Gramella forsetii KT0803]
 gi|117578400|emb|CAL66869.1| protein containing DUF294 [Gramella forsetii KT0803]
          Length = 640

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 6/114 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSV 285
             +  V     +  +  ++S++R G V +V E +K  GI+T+ D               +
Sbjct: 176 KKMVTVSPDTSIQKSAILMSKRRVGSVIIV-EEEKPVGIVTDVDFRELVATGKLPIESPI 234

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
            +VM        +   +  A  ++ + NI+ + +  D     K  GIV   D++
Sbjct: 235 SEVMNSPVICYSKKLTIAQAQLIMMKQNINHICITKDGTPNTKVKGIVSEHDII 288


>gi|45357983|ref|NP_987540.1| CBS domain-containing protein [Methanococcus maripaludis S2]
 gi|44920740|emb|CAF29976.1| CBS domain Related protein [Methanococcus maripaludis S2]
          Length = 321

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 55/116 (47%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--RNFHKDLNTL 283
               + ++     + +   ++ + R     V +  ++L GI+T  D+   ++    L  L
Sbjct: 58  MTKDLVILDEEESIDELGKLIKQYRHMGYPVFNSNKELVGIVTFDDLRTKKSSMSRLKKL 117

Query: 284 SVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++D+M K      I   +  + A +++ +++I  ++VVDD  K  GIV   D++R
Sbjct: 118 KIKDIMTKKDEIVSISPYSSASEAQKIMVEYDIGRVLVVDD-GKLKGIVTKGDIVR 172



 Score = 44.9 bits (105), Expect = 0.017,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 40/115 (34%), Gaps = 11/115 (9%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                       +   D+M   D I  +       +A  I+ E   G V VVD+  KLKG
Sbjct: 105 RTKKSSMSRLKKLKIKDIMTKKDEIVSISPYSSASEAQKIMVEYDIGRVLVVDD-GKLKG 163

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIK--------NPKVILEDTLLTVAMQLLRQH 312
           I+T+GDI R          +              NPK +  + L    + L+   
Sbjct: 164 IVTKGDIVRTSEIYNPEPKINKCSHITNIYFYGDNPKKV--EELAEEIIVLMGAR 216



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 1/69 (1%)

Query: 268 TEGDIFRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +E D+ + +  K L+ + + D+M K+  ++ E+  +    +L++Q+      V +  ++ 
Sbjct: 36  SERDLVKLYDLKVLDKIVINDIMTKDLVILDEEESIDELGKLIKQYRHMGYPVFNSNKEL 95

Query: 327 IGIVHFLDL 335
           +GIV F DL
Sbjct: 96  VGIVTFDDL 104


>gi|288817886|ref|YP_003432233.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
 gi|288787285|dbj|BAI69032.1| poly A polymerase [Hydrogenobacter thermophilus TK-6]
 gi|308751485|gb|ADO44968.1| Polynucleotide adenylyltransferase region [Hydrogenobacter
           thermophilus TK-6]
          Length = 820

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 ++     + DAI  LS++ F    VVD+  KL G+I +  + R   K      V
Sbjct: 304 MTSPPFVLHQDTGISDAILELSQRNFAGAPVVDDAGKLVGVIYKKSLVRAL-KHYPEGRV 362

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D M++    +  +  +  A ++L ++   ++ VV +  + +G++  LDLL
Sbjct: 363 RDFMLEEFHTLTPEDFIWKAEEILSRYGEKLIPVV-EGDRLVGVITRLDLL 412



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 33/63 (52%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  L V++VM   P V+ +DT ++ A+  L Q N +   VVDD  K +G+++   L
Sbjct: 291 LEGKRVALKVKEVMTSPPFVLHQDTGISDAILELSQRNFAGAPVVDDAGKLVGVIYKKSL 350

Query: 336 LRF 338
           +R 
Sbjct: 351 VRA 353


>gi|151944198|gb|EDN62488.1| IMP dehydrogenase [Saccharomyces cerevisiae YJM789]
          Length = 447

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 3   TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 53

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G++T  DI   F +D ++L V+DVM K
Sbjct: 54  PTTTVGEAKSMKEKYGFAGFPVTTDGKRNAKLVGVVTSRDI--QFVED-SSLLVQDVMTK 110

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 111 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 156


>gi|329765254|ref|ZP_08256834.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
 gi|329138160|gb|EGG42416.1| Trk-type K+ transport system, membrane component [Candidatus
           Nitrosoarchaeum limnia SFB1]
          Length = 576

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 6/116 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---NTLSVEDV 288
           ++     + +A TIL +K    + VVD+     GI+T+ DI     + L      ++ D+
Sbjct: 1   MLSEHVKITEACTILKKKDVDEIIVVDDSYNPIGIVTDEDILTKLSESLVNPLKTTLGDI 60

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLLRFGII 341
           M+     I ED  L+ A++++R+  I  + V+      +GI+     ++L++  ++
Sbjct: 61  MVFPVITIGEDHFLSEALEIMREKKIRKIAVLSKSNLVVGILYLDTIVNLVKKSLV 116


>gi|327463426|gb|EGF09745.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1057]
          Length = 280

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            A++     + +TS N   +    D ++ +  +          
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNIS 234


>gi|313680932|ref|YP_004058671.1| signal transduction protein with cbs domains [Oceanithermus
           profundus DSM 14977]
 gi|313153647|gb|ADR37498.1| putative signal transduction protein with CBS domains
           [Oceanithermus profundus DSM 14977]
          Length = 136

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
                + DA  ++++   G V VV EG K  GI+T+ DI     +   D +   V  VM 
Sbjct: 15  PPTATVTDAAALMADMNVGSV-VVAEGLKPVGILTDRDIVVRVVRPGLDPDETPVFRVMT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P V+ E   L  A++ ++   +    +VD     +GI    D+L+ 
Sbjct: 74  PEPLVLEEQMSLFEALEEVKHKGVRRYPIVDYEGNLVGIFTLDDVLQL 121


>gi|308126312|ref|ZP_07663708.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
 gi|308106850|gb|EFO44390.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AQ4037]
          Length = 519

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEGDI-FRNFHKDL 280
           P +  G  +  A  ++++     + +VD    L          GIIT+ D+  R   + L
Sbjct: 51  PTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDLCTRVLAEGL 110

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 111 SPQDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 168



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---------QKAI 327
             DL T  V+ ++  +   I     +  A QL+ Q NIS L++VD              +
Sbjct: 34  ANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVL 93

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 94  GIITDRDL 101


>gi|296268383|ref|YP_003651015.1| CBS domain-containing membrane protein [Thermobispora bispora DSM
           43833]
 gi|296091170|gb|ADG87122.1| CBS domain containing membrane protein [Thermobispora bispora DSM
           43833]
          Length = 201

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 15/125 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLN--- 281
               +  V +   +  AI +L +K      VVDE  ++ GII+E D+ R  F  D     
Sbjct: 7   MTSPVVTVPVSWSVRQAIRLLYDKDITAAPVVDEQGRMVGIISEMDLLRGEFDTDRRVFL 66

Query: 282 ----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                     +  +E+VM  N + + ED  +  A+ L+    +  + V+   ++  GIV 
Sbjct: 67  RPSAPVDLAPSPGIEEVMTPNVRTVQEDDDVMAAVDLMITMGVKSVPVL-RGEQLTGIVS 125

Query: 332 FLDLL 336
             DL+
Sbjct: 126 RRDLM 130



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V +VM      +     +  A++LL   +I+   VVD+  + +GI+  +DLLR
Sbjct: 3   VREVMTSPVVTVPVSWSVRQAIRLLYDKDITAAPVVDEQGRMVGIISEMDLLR 55


>gi|222152615|ref|YP_002561790.1| hypothetical protein SUB0437 [Streptococcus uberis 0140J]
 gi|222113426|emb|CAR41105.1| conserved hypothetical protein [Streptococcus uberis 0140J]
          Length = 220

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  I+ +     + V+ E  KL G++T G +                +  L
Sbjct: 14  ISPETGVAKAADIMRDNDVRRLPVL-EKGKLVGLVTAGTMAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MIK    +  +  L  A+ L+ QH I VL V+D  +   GI+   D+ + 
Sbjct: 73  NKTKIRDIMIKKVITVSPNASLEDAIYLMLQHKIGVLPVLDKDE-LCGIITDRDVFKA 129



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M K+   I  +T +  A  ++R +++  L V++   K +G+V 
Sbjct: 1   MSVKDYMTKDVIAISPETGVAKAADIMRDNDVRRLPVLEK-GKLVGLVT 48



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI ++ + + G + V+D+ + L GIIT+ D+F+ F
Sbjct: 81  MIKKVITVSPNASLEDAIYLMLQHKIGVLPVLDKDE-LCGIITDRDVFKAF 130


>gi|182419057|ref|ZP_02950311.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium butyricum 5521]
 gi|237669239|ref|ZP_04529221.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium butyricum E4 str. BoNT E BL5262]
 gi|182377012|gb|EDT74582.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium butyricum 5521]
 gi|237655126|gb|EEP52684.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium butyricum E4 str. BoNT E BL5262]
          Length = 278

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 6/156 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + + + +S+L  +       A++ I   K RV   G+G SG   ++  +     G    
Sbjct: 101 AQTIINTKSTLDKD---NLKLAIKMITDSK-RVFFYGVGSSGFTANEAQTRFMRLGVIGN 156

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +           +    D+IIV S SG + ++   +  A++ +  +IAITS   S +A 
Sbjct: 157 AIIDPHFQSMYSSISNSQDVIIVFSISGYTKDIIEAVKIAKQENTKIIAITSYILSPIAQ 216

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
            AD VL    +      G    T  I QL I D L 
Sbjct: 217 LADCVLLTSAKENPLEGG--SFTGKISQLYIIDLLC 250


>gi|269963478|ref|ZP_06177804.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831775|gb|EEZ85908.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 296

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 32/187 (17%), Positives = 70/187 (37%), Gaps = 6/187 (3%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
           H  S          +S  Q   + +      L+ + + +   +      A E I   +  
Sbjct: 92  HSDSYAPSEQLQPDDSCEQIVTKVLQNSINALTEILNFVDANM---VSAAAEAIINARN- 147

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + +   G S  I       L   G  +              +++  D+++V+S SG + +
Sbjct: 148 IELYAAGGSNIICEDFQHKLLRFGIRASVPRDRHLMLMSASVLSEKDVVLVVSHSGQTVD 207

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           L   +  A++    +I+IT+   + ++  +D  L  P  PE          + +++LA+ 
Sbjct: 208 LMDAVRLAKQSGATIISITNNFHAELSQLSDYPLYAPASPEPLLGKN--GIARLVKLAMI 265

Query: 187 DALAIAL 193
           D+L   +
Sbjct: 266 DSLYATI 272


>gi|170695907|ref|ZP_02887047.1| CBS domain containing protein [Burkholderia graminis C4D1M]
 gi|170139205|gb|EDT07393.1| CBS domain containing protein [Burkholderia graminis C4D1M]
          Length = 152

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I     ++   + T ++  VM
Sbjct: 17  VTPDATLHDAVNTMAEHDIGSL-VVMEYGDLVGMLTFREIILTLKENGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVM-ESRTLMGVISFYDVAKA 123



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D  L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDATLHDAVNTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|37198369|dbj|BAC94205.1| transcriptional regulator [Vibrio vulnificus YJ016]
          Length = 287

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 120 QVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFEDVVMQRMSCINCSD 178

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+ +++S +G +  L  I   AR     +IA+T++  S +   A + ++L    ++  +
Sbjct: 179 NDVFVLISHTGRTKSLVEIANLARENGATVIAVTAK-DSPLEKAASLAISLDVPEDTDVY 237

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 238 --MPMASRVVQMTVIDVLATGFTLRRG 262


>gi|229505257|ref|ZP_04394767.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae BX 330286]
 gi|229511073|ref|ZP_04400552.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae B33]
 gi|229515531|ref|ZP_04404990.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae TMA 21]
 gi|229518193|ref|ZP_04407637.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae RC9]
 gi|229525761|ref|ZP_04415166.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae bv. albensis VL426]
 gi|229529763|ref|ZP_04419153.1| glucose repressor HexR forf Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae 12129(1)]
 gi|229608276|ref|YP_002878924.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae
           MJ-1236]
 gi|229333537|gb|EEN99023.1| glucose repressor HexR forf Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae 12129(1)]
 gi|229339342|gb|EEO04359.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae bv. albensis VL426]
 gi|229344908|gb|EEO09882.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae RC9]
 gi|229347300|gb|EEO12260.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae TMA 21]
 gi|229351038|gb|EEO15979.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae B33]
 gi|229357480|gb|EEO22397.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae BX 330286]
 gi|229370931|gb|ACQ61354.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae MJ-1236]
          Length = 301

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 134 QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 192

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 193 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 251

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 252 --MPMASRVVQMTVIDVLATGFTLRRG 276


>gi|229068405|ref|ZP_04201706.1| CBS domain protein [Bacillus cereus F65185]
 gi|228714547|gb|EEL66421.1| CBS domain protein [Bacillus cereus F65185]
          Length = 112

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+  G + VV E +++ G++T+ D+       K   +  + +VM  N   +  +  + 
Sbjct: 1   MKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIE 59

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A +L+ QH I  L VVD   + IG++   DL
Sbjct: 60  KATELMAQHQIRRLPVVD-SGQLIGMLALGDL 90


>gi|170751024|ref|YP_001757284.1| signal-transduction protein [Methylobacterium radiotolerans JCM
           2831]
 gi|170657546|gb|ACB26601.1| putative signal-transduction protein with CBS domains
           [Methylobacterium radiotolerans JCM 2831]
          Length = 143

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 41/111 (36%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L + I IL++KR G + V      + GII+E DI R   +         V   M
Sbjct: 17  VGPDKTLDEVIQILADKRIGALVVAQADGTVAGIISERDIMRALARHGGSAFDAPVSAHM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                       +   M L+       + V  +  + IG+V   D++   I
Sbjct: 77  TAEVTTCGRSATIEEVMTLMTDGRFRHVPVC-EDGRLIGLVSIGDVVARKI 126



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  D  L   +Q+L    I  L+V        GI+   D++R 
Sbjct: 15  VTVGPDKTLDEVIQILADKRIGALVVAQADGTVAGIISERDIMRA 59


>gi|21228473|ref|NP_634395.1| hypothetical protein MM_2371 [Methanosarcina mazei Go1]
 gi|20906955|gb|AAM32067.1| conserved protein [Methanosarcina mazei Go1]
          Length = 291

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 2/123 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                      +      LV +   + +A  +          V D+  K+ GIIT  DI 
Sbjct: 165 MISLPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPVEDK-GKIVGIITYTDIA 223

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +    + V+D+M K    +  D  L   ++L  ++N+  L+V        G +   
Sbjct: 224 HAIAQGKPNVKVKDIMTKELITVDGDMQLYDVVKLFHKYNVGRLIVT-INGVPKGTLSKT 282

Query: 334 DLL 336
           D+L
Sbjct: 283 DVL 285



 Score = 39.9 bits (92), Expect = 0.60,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+  M   P ++  +  +  A +L  ++N+    V +D  K +GI+ + D+   
Sbjct: 168 LPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPV-EDKGKIVGIITYTDIAHA 225


>gi|332800034|ref|YP_004461533.1| RpiR family transcriptional regulator [Tepidanaerobacter sp. Re1]
 gi|332697769|gb|AEE92226.1| transcriptional regulator, RpiR family [Tepidanaerobacter sp. Re1]
          Length = 285

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S+L  +           AV+ +     R+   G+G S     +  +        +    
Sbjct: 109 ISALNETYNLVKEEDVKKAVDFLINA-NRIHFFGVGASLITALEAKNKFMRITNKTECSI 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A        ++  +D  +++S+SGS+ +   I   A+      I IT   KS +  ++D
Sbjct: 168 DAHLQIMSAALMDENDAAVLISYSGSTKDTIEIAKLAKERGAKTICITRFAKSPLTAYSD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++L         P   A  ++ I QL + D L     + 
Sbjct: 228 VILLCGV--NEGPLQSASLSAKISQLFLLDILYAEYFKR 264


>gi|161831210|ref|YP_001597178.1| CBS domain protein [Coxiella burnetii RSA 331]
 gi|215919163|ref|NP_820320.2| CBS domain-containing protein [Coxiella burnetii RSA 493]
 gi|161763077|gb|ABX78719.1| hypothetical protein COXBURSA331_A1483 [Coxiella burnetii RSA 331]
 gi|206584047|gb|AAO90834.2| CBS domain containing protein [Coxiella burnetii RSA 493]
          Length = 125

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 4/102 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKNPKV 295
           + +A   + +   G + V  E  KL G +T+ DI  +     KD    ++ DVM +  + 
Sbjct: 1   MKEAAKKMKQLDCGFIPV-GENDKLIGTVTDRDIVLHAAAQGKDPGNTALRDVMSEGVEY 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             E+  L  A + + +  I  L+V++D ++  GI+   D+ R
Sbjct: 60  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIAR 101



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSVEDV 288
                 L +A   +  K+   + V+++ +++ GI++ GDI  R+   DL   +VE +
Sbjct: 60  CYENDDLDEATKRMERKQIHRLIVLNDKKRMTGILSLGDIARRSQDDDLCAQAVEGI 116


>gi|126651327|ref|ZP_01723534.1| acetoin utilization protein [Bacillus sp. B14905]
 gi|126591856|gb|EAZ85939.1| acetoin utilization protein [Bacillus sp. B14905]
          Length = 217

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
             +    +     +++A+ ++ +K+   + V+DE + + G+ITE DI       L     
Sbjct: 9   MNEEPYTLAPTNTVLEALKLMRDKKVRHLPVIDEERHVLGVITERDIKEVLPSSLQDEPN 68

Query: 283 -----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  VE++M+K+P V      +        +  +  L +V   +K +GIV   DLL
Sbjct: 69  SPVFQAKVEEIMVKDPLVGHPLDFVEEVALTFYESKVGCLPIV-SGEKLVGIVTTTDLL 126



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 28/51 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M + P  +     +  A++L+R   +  L V+D+ +  +G++   D+
Sbjct: 5   VEEIMNEEPYTLAPTNTVLEALKLMRDKKVRHLPVIDEERHVLGVITERDI 55


>gi|15679235|ref|NP_276352.1| inosine-5'-monophosphate dehydrogenase related protein III
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622335|gb|AAB85713.1| inosine-5'-monophosphate dehydrogenase related protein III
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 313

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 8/114 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA++++ E   G + VVD+ +K+ GI++E D         N    E+ M  +
Sbjct: 122 ITTRDSIADAVSMMLENSVGALPVVDDDEKIAGIVSERDFVLLMAGVFNDEVTEEHMTAD 181

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--------KAIGIVHFLDLLRF 338
                  T +  A +++ ++ +  + V+ + +        K +GIV   D+L F
Sbjct: 182 VISTTPGTPIEGASKIMVRNRLRRIPVLGEERKTPHPEEEKLVGIVTSTDILEF 235



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/135 (23%), Positives = 52/135 (38%), Gaps = 22/135 (16%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGIITEGDIFRNF 276
           H    +     G P+  A  I+   R   + V+ E         +KL GI+T  DI    
Sbjct: 177 HMTADVISTTPGTPIEGASKIMVRNRLRRIPVLGEERKTPHPEEEKLVGIVTSTDILEFL 236

Query: 277 HKD-------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            ++             + +  V ++M     ++   T L    +L+ +H I  L VVD  
Sbjct: 237 GRNQAFSAMKTNSAEEVLSTPVNEIMETQVCMVTSTTPLGRVCELMEEHGIGGLPVVD-Y 295

Query: 324 QKAIGIVHFLDLLRF 338
            +  GI+   DLLR 
Sbjct: 296 GELTGIITESDLLRA 310



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               + +V    PL     ++ E   G + VVD   +L GIITE D+ R   
Sbjct: 262 METQVCMVTSTTPLGRVCELMEEHGIGGLPVVDY-GELTGIITESDLLRAIA 312



 Score = 39.9 bits (92), Expect = 0.53,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 286 EDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
            DVM    K    I +   +  A +++ ++    L + +    K  GIV  +D+L
Sbjct: 29  GDVMAIARKEVISIPQTATIKEAAEIMVKNKFRRLPITNPGTGKLQGIVTAMDIL 83


>gi|320451102|ref|YP_004203198.1| putative CBS domain pair [Thermus scotoductus SA-01]
 gi|320151271|gb|ADW22649.1| putative CBS domain pair [Thermus scotoductus SA-01]
          Length = 150

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 50/139 (35%), Gaps = 26/139 (18%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI--------------ITE-- 269
              +   +     L +A   + EKR+G + VVD    L G+               ++  
Sbjct: 7   MTPNPDTIGPEATLEEAARRILEKRYGSLPVVDREGCLLGLLQVEELLPHPENIPFSDVE 66

Query: 270 ----------GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                     G+   + ++      V+ VM  +   +  +  +  A+Q L    +  L V
Sbjct: 67  ALQLFGEWVNGEFLEDIYRRYQKTPVKAVMRTDIPRLHPEDPVGTALQTLLTSEVRHLPV 126

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           VD   + +GI+   D L+ 
Sbjct: 127 VDQGNRVVGILTRSDFLKL 145



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V ++M  NP  I  +  L  A + + +     L VVD     +G++   +LL
Sbjct: 1   MKVAELMTPNPDTIGPEATLEEAARRILEKRYGSLPVVDREGCLLGLLQVEELL 54


>gi|50086461|ref|YP_047971.1| IMP dehydrogenase [Acinetobacter sp. ADP1]
 gi|49532437|emb|CAG70149.1| IMP dehydrogenase [Acinetobacter sp. ADP1]
          Length = 488

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NVPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I        V VV +  ++ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVSPETTVRELIAITQANNISGVPVV-KDGQVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VVDD     G++   D  + 
Sbjct: 152 MTPQDRLVTVKEGASKESIQALLQKHRIEKVLVVDDLHALKGLITVTDFRKA 203


>gi|83943426|ref|ZP_00955885.1| hypothetical protein EE36_00955 [Sulfitobacter sp. EE-36]
 gi|83845658|gb|EAP83536.1| hypothetical protein EE36_00955 [Sulfitobacter sp. EE-36]
          Length = 144

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 36/107 (33%), Gaps = 2/107 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +         + +A  +  +K  G + VV++      ++T+ DI             
Sbjct: 7   MTSNPTCCGPDASVQEAAKLTDDKSVGSIPVVNDAGAPFAVVTDRDICCGAVAQGKGTDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              DVM K+      D  +      + +  +   +V D   K  GIV
Sbjct: 67  RASDVMSKDVLTTAPDDDVEECCTKMEEKQVRRAVVTDAAGKCCGIV 113



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+++M  NP     D  +  A +L    ++  + VV+D      +V   D+
Sbjct: 1   MQVQEIMTSNPTCCGPDASVQEAAKLTDDKSVGSIPVVNDAGAPFAVVTDRDI 53


>gi|314937102|ref|ZP_07844449.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis subsp. hominis
           C80]
 gi|313655721|gb|EFS19466.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis subsp. hominis
           C80]
          Length = 190

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 17/184 (9%)

Query: 29  RSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
             I+ E    LS LE +  G  + +   A         R+   G G+SG++ +  A  L 
Sbjct: 16  HLILEEIDNTLSHLEDNDYGRFANEVVGA--------SRIFTAGKGRSGYVANSFAMRLN 67

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +  +  A         I   DL+I++S SGS+D L+ +   A      +  IT++
Sbjct: 68  QLGKDASAIGEATTP-----SIKEHDLLIIISGSGSTDHLRLLAEKAHSVGAKIALITTK 122

Query: 148 NKSVVACHADIVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLESRNFSENDF 204
            +S +   AD V+ LP   +    G   P  S   Q      D++ I L+++ N +E   
Sbjct: 123 KESKIGDVADTVIALPAGTKHEAEGSEQPLGSLFEQSSLIFLDSVVIGLMDAFNINEEAM 182

Query: 205 YVLH 208
              H
Sbjct: 183 QDNH 186


>gi|260912666|ref|ZP_05919152.1| RpiR family transcriptional regulator [Pasteurella dagmatis ATCC
           43325]
 gi|260633044|gb|EEX51209.1| RpiR family transcriptional regulator [Pasteurella dagmatis ATCC
           43325]
          Length = 288

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 66/169 (39%), Gaps = 3/169 (1%)

Query: 29  RSIIAEKR-GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           RSI A+ +  ++++ +     L F     V KI     R+ + G+G SG       +   
Sbjct: 100 RSIAAKLQSAVTNVIAETVNLLDFNELEKVVKIMMNAKRIFLFGVGSSGITAEDAKNKFM 159

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G            +    ++   D++I +S SG S E+   L  A++     +AIT  
Sbjct: 160 RIGLQVDSTSNNHFMYMQAALMQEGDVVIGISHSGYSKEVIQALNIAKKNEATTVAITYN 219

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +S +   AD VL                 + I QL + D +   ++++
Sbjct: 220 LRSPITHAADHVLINGNRQG--QLQGDSMGTKIAQLFVLDLIYTLIVQA 266


>gi|302556041|ref|ZP_07308383.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
 gi|302473659|gb|EFL36752.1| oxidoreductase [Streptomyces viridochromogenes DSM 40736]
          Length = 139

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNT 282
                  V+    + +   I+ ++  G V V  EG  L+G++T+ D+  R+  +  D   
Sbjct: 9   MTSDPATVEPQTSVAEVARIMRDEDLGVVLVT-EGDNLRGLVTDRDLVVRSISRGGDPER 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V      +   +  D  L   ++L+R+H++  + VVD     +GIV   D+
Sbjct: 68  TTVAGACSDDLVTVSPDENLGHTVELMREHSVRRIPVVDH-GHPVGIVSLGDM 119



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M  +P  +   T +    +++R  ++ V++V +      G+V   DL+
Sbjct: 5   VRDIMTSDPATVEPQTSVAEVARIMRDEDLGVVLVTEGDN-LRGLVTDRDLV 55


>gi|209521231|ref|ZP_03269953.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
 gi|209498344|gb|EDZ98477.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
          Length = 287

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 42/200 (21%), Positives = 72/200 (36%), Gaps = 9/200 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSI-IAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M    S    +     ++ +   VQ  +  +  A   G++    +L   +      A+  
Sbjct: 71  MQLAQSVAGGLPYASAAVARGDDVQTLMDKVGEAAIDGITHARGALDPAV---VESAIAA 127

Query: 60  IKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           + + + RV   G+G  SG +    A         +             G++   D+   +
Sbjct: 128 LSSAR-RVFFFGVGSGSGLVAQDAALRFLRIDIAAAAFTDGHLQRLYAGLMEPGDVAFAI 186

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG S E+   +  A+      IA+T    S +A   DI L L       P+   P  S
Sbjct: 187 SHSGRSVEVNESIQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVASPIDPN--TPGVS 243

Query: 179 AIMQLAIGDALAIALLESRN 198
            ++ L I DALAI +     
Sbjct: 244 RLVHLCIMDALAIGVALKAG 263


>gi|116249467|ref|YP_765305.1| hypothetical protein pRL90009 [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115254115|emb|CAK03717.1| conserved CBS domain hypothetical protein [Rhizobium leguminosarum
           bv. viciae 3841]
          Length = 226

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 25/131 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNF-------------- 276
           +     +  A+ ++ +     + V+D+  ++ G++TEGD+   R                
Sbjct: 14  IGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLLLRREIRFAPRAARAPEIIS 73

Query: 277 HKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             DL      N   V DVM ++  V   D+ ++   + L+ H I  L +V +  + +GIV
Sbjct: 74  EIDLERYISSNGWCVADVMSQDVIVASPDSEVSDIAESLQAHRIKRLPIV-EDGRLVGIV 132

Query: 331 HFLDLLRFGII 341
              D+L  G+I
Sbjct: 133 SRRDIL--GLI 141



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M  N   I     +  A+ ++ Q+N+S L V+DD  +  G++   DLL
Sbjct: 1   MQAKDIMTTNVVSIGPAVGIRHAVAVMMQNNVSGLPVIDDEGRVCGLLTEGDLL 54


>gi|301122411|ref|XP_002908932.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262099694|gb|EEY57746.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 184

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 5/112 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---VEDV 288
           ++     + +A+  ++    GC+AV  +  K  GI+TE D  +       T     V+ +
Sbjct: 47  IIPEKATVFEALKRMAGINLGCLAVSSDDDKFVGILTERDYLKKVELQGLTAKDTLVKQI 106

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M       V  E+   +  M  +   ++  L VV+D    IG++   D++R 
Sbjct: 107 MTNRARLTVAKENETPSQLMTKMLSSDVRHLPVVNDDGNLIGMLSIKDIVRE 158


>gi|260433864|ref|ZP_05787835.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
 gi|260417692|gb|EEX10951.1| CBS domain protein [Silicibacter lacuscaerulensis ITI-1157]
          Length = 145

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLK-GIITEGDIFRNFHK---DLNTLSVEDV 288
           V     + DA  IL+EKR G V V ++G K   GI++E DI R          T  V   
Sbjct: 18  VAPSTTVSDAAKILAEKRIGTVVVSEDGGKTAMGILSERDIVRELAASGSGCLTEPVSAY 77

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +      +   +   +  + +     + VV +  + +GIV   D ++ 
Sbjct: 78  MTEKLVTATKQDKVQDVLARMTEGRFRHMPVV-EDGQLVGIVTLGDAVKA 126



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRF 338
                  +   T ++ A ++L +  I  ++V +D  K A+GI+   D++R 
Sbjct: 11  ATDGVVTVAPSTTVSDAAKILAEKRIGTVVVSEDGGKTAMGILSERDIVRE 61


>gi|317053020|ref|YP_004119374.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
 gi|316953347|gb|ADU72818.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
          Length = 297

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/173 (17%), Positives = 65/173 (37%), Gaps = 6/173 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI+A +  L +++ ++   ++  F       ++   R+VI G G SG I       L   
Sbjct: 115 SILALQDALKAIDIAVVKSVAALFIH-----RSENARIVIAGCGGSGSICEDFNHKLLKI 169

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  S     +        ++   D+++ +S SG + ++  +   A       I +T+   
Sbjct: 170 GIFSSVFSDSHKQLMTASLMRPGDILLTVSHSGQTTDIINMTKMANDKGAETICLTNYPN 229

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           S ++  +   +    +      G   TT  +    +     I   ++  FS+ 
Sbjct: 230 SPLSHISRHAIISSVKNN-PITGENATTRIVHLNILDAIFTIIASKTSEFSQE 281


>gi|224826492|ref|ZP_03699593.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Lutiella nitroferrum 2002]
 gi|224601093|gb|EEG07275.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Lutiella nitroferrum 2002]
          Length = 836

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD---IFRNFHKDLNTLSVEDVM 289
                 + +A  ++ E   G + V+DE     GI TE D   +  +     +   V  VM
Sbjct: 19  CPPTTSVYEAARLMMESHCGSIIVMDEAGTALGIWTETDALNLDFSVATGADGTPVAKVM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               + +   T +  A    R+H I   +V +   + +G++   D++
Sbjct: 79  SSPVRTLQSGTSIHDATGFFRRHGIRHALV-ERDGRYLGLLSLTDIV 124



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 45/110 (40%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                L+     L DA+ ++ +     V V     +L GI+T  D+ R   +     ++ 
Sbjct: 143 CRPACLLGAELGLKDAVKVMRQGAVDAVGVCFADGEL-GILTRRDVVRLLAQGECEHALG 201

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  +    + E+T L  A +L+ QH I  L V         I+ F D+L
Sbjct: 202 AVCSRPMLTMAENTSLLHARRLMLQHKIRHLGVCGADGGLKFILGFGDIL 251


>gi|254481246|ref|ZP_05094491.1| Putative nucleotidyltransferase domain family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214038409|gb|EEB79071.1| Putative nucleotidyltransferase domain family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 635

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 65/187 (34%), Gaps = 19/187 (10%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE--SRNFSEND--FYVLHPGGKLGTLF 217
           L +       GL     A++   I DAL   L +   R   +ND  F     G +   L 
Sbjct: 96  LGEGESFHIIGLNAERGAVIATVIEDALVYFLPDDVYRGLRKNDRSFDRYFSGQRNRRLR 155

Query: 218 VCASDVMHSGDSIPLVK-----------IGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             A         +  V                + +    ++++R     VV +  +L GI
Sbjct: 156 RAARYQPELNTMMQQVNTLMSTNLLMMEPSATVQETAQAMAKRRVSSAFVV-KNTELLGI 214

Query: 267 ITEGDIF-RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T+ D+  R   K L     V  VM  NP+ +     +  A  L+ Q     L V     
Sbjct: 215 VTDRDLRVRAVAKALAPETPVSQVMTTNPEWVEGQETIFAATLLMTQGRFHHLPV-KING 273

Query: 325 KAIGIVH 331
           + +GIV 
Sbjct: 274 ETVGIVT 280


>gi|78048738|ref|YP_364913.1| hypothetical protein XCV3182 [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
 gi|78037168|emb|CAJ24913.1| conserved hypothetical protein [Xanthomonas campestris pv.
           vesicatoria str. 85-10]
          Length = 142

 Score = 73.8 bits (180), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
            +++EK  G V V+ EG +L GI++E D  R      +  +T SV ++M      +    
Sbjct: 29  RLMAEKAIGAVLVM-EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVSPSD 87

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 88  TVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 124



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 178 SAIMQLAIGDALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
             + + AIG  L +         SE D+                S        +  V   
Sbjct: 29  RLMAEKAIGAVLVMEGTRLVGIVSERDYA--RKVVLRDRASSTTSVAEIMSAEVVTVSPS 86

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +   + ++++ RF  + VV E  +++G+I+ GD+ +  
Sbjct: 87  DTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKAV 125


>gi|301631453|ref|XP_002944812.1| PREDICTED: HTH-type transcriptional regulator hexR-like [Xenopus
           (Silurana) tropicalis]
          Length = 300

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 60/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N     A + +      L      L          AV+ +     R+   G G S  +  
Sbjct: 107 NDPETVANKILDYTIGSLDITRRKLDRR---AVAKAVDLLVRSS-RLEFFGFGASAVVAF 162

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                    G P               M+   D ++ +S+SGSS  L   +  AR     
Sbjct: 163 DAQQRFPLFGVPCSATADPHQQMITASMLKPGDTVVAISYSGSSRVLIEAVKVARERGAS 222

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           ++ IT    S +   AD+VL      ++      PTTS +  L + D L+ ++   R 
Sbjct: 223 VLVITGSE-SPITKFADVVLIAETPEDTNFF--TPTTSRLAALVMIDILSTSVSMQRG 277


>gi|209522266|ref|ZP_03270897.1| CBS domain containing protein [Burkholderia sp. H160]
 gi|209497300|gb|EDZ97524.1| CBS domain containing protein [Burkholderia sp. H160]
          Length = 155

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I      +   + T ++  VM
Sbjct: 17  VTPDTTLHDAVDTMAEHDIGSL-VVMEYGDLVGMLTFREIILTLSTNGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVM-ESRTLMGVISFYDVAKA 123



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTTLHDAVDTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|117926756|ref|YP_867373.1| Cl- channel, voltage-gated family protein [Magnetococcus sp. MC-1]
 gi|117610512|gb|ABK45967.1| Cl- channel, voltage-gated family protein [Magnetococcus sp. MC-1]
          Length = 582

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/133 (19%), Positives = 50/133 (37%), Gaps = 4/133 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G+   L            +  ++     + D    +   +     VV+E   LKGI++ 
Sbjct: 434 SGRESGLLRHIPVSAIMKRTFEMIPDSMNIRDLKEKIHRTQEENFLVVNEQGDLKGIVSF 493

Query: 270 GDIFR-NFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-- 325
            DI    F + L  L  V D+  +    +     L  A + +   N+  L VV +  +  
Sbjct: 494 QDIRGVAFEQGLEDLVLVRDIATRELITVTPSDNLYDAFRRMGSGNVEQLPVVSEDNRSQ 553

Query: 326 AIGIVHFLDLLRF 338
            +GI+   D+++ 
Sbjct: 554 VLGIITNHDVIQA 566


>gi|52548695|gb|AAU82544.1| Zn-dependent proteases [uncultured archaeon GZfos18C8]
          Length = 368

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           V+    + + + ++ EK+     VVD+   K+ GI+T  DI      +   + V +VM K
Sbjct: 255 VQDNLTISELLRLMFEKKHLGYPVVDQFTGKIIGIVTFTDIRSVPMSEHGNVLVREVMAK 314

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   I ED     A++++   N+  L+V D      GIV   DL R
Sbjct: 315 NVVFIPEDADAMDALKMMSTENVGQLLVQD-RGAITGIVSRTDLTR 359



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDD-CQKAIGIVHFLDL 335
           L  + V D+M +    + ++  ++  ++L+ +     L   VVD    K IGIV F D+
Sbjct: 239 LEGIRVRDLMTREIAYVQDNLTISELLRLMFEKK--HLGYPVVDQFTGKIIGIVTFTDI 295


>gi|14600551|ref|NP_147068.1| hypothetical protein APE_0234 [Aeropyrum pernix K1]
 gi|5103626|dbj|BAA79147.1| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 278

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--------NTLS 284
           V  G  L     I+ E+R+  V VVD+   ++GI+T+ D+ R  +  L        + + 
Sbjct: 153 VLEGDSLTRVWEIMVERRYAGVPVVDQRMVVRGIVTQYDLIRKGYTRLGLESEAPPHRVR 212

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
           VE VM ++   + E   L    +++    +  + VV   D +   GI+   DL+R 
Sbjct: 213 VESVMTRSVIYVAESDNLEDVARIMLDRGVGRVPVVKSRDSRVLTGIIDREDLVRL 268



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 2/127 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII-TEGDIF 273
           +    A  +    +   ++K    L +A+  + +       VV++  +L G++  E  I 
Sbjct: 70  SRKSEAKALDIMEEPAVVLKPSYSLEEAVFSMLKFDEWYAPVVNDANRLVGVLGLETPIR 129

Query: 274 RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      +  D M ++ + +LE   LT   +++ +   + + VVD      GIV  
Sbjct: 130 LLLEAGFYRGYTASDAMTRDVEYVLEGDSLTRVWEIMVERRYAGVPVVDQRMVVRGIVTQ 189

Query: 333 LDLLRFG 339
            DL+R G
Sbjct: 190 YDLIRKG 196



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 19/102 (18%), Positives = 41/102 (40%), Gaps = 1/102 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+   P+ +   IL +     V VV+   +L+G+I    +        +     D+
Sbjct: 22  KPVTVEKEAPIGEIRRILRDTGSRIVLVVNGEGRLEGVIYRSSVI-LVTSRKSEAKALDI 80

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           M +   V+     L  A+  + + +     VV+D  + +G++
Sbjct: 81  MEEPAVVLKPSYSLEEAVFSMLKFDEWYAPVVNDANRLVGVL 122


>gi|326796646|ref|YP_004314466.1| RpiR family transcriptional regulator [Marinomonas mediterranea
           MMB-1]
 gi|326547410|gb|ADZ92630.1| transcriptional regulator, RpiR family [Marinomonas mediterranea
           MMB-1]
          Length = 287

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 54/145 (37%), Gaps = 4/145 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
             AV+ +   + R+   G+G SG +             P                    D
Sbjct: 123 SRAVDVLAGAR-RIEFYGLGASGPVAKDAHHKFFRLNVPVVAYTDILVQRMAAAGTHPGD 181

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
            ++++S++G +  L      AR     +I IT   +S +  H  IVL  P E        
Sbjct: 182 AVVLISYTGRTLPLIETARVAREAGASVIGIT-NPESPLTEHCSIVL--PIEETEDTDIY 238

Query: 174 APTTSAIMQLAIGDALAIALLESRN 198
            P +S I+ L + DALA  +L  R 
Sbjct: 239 TPMSSRIVYLTLIDALATGVLLKRG 263


>gi|317494019|ref|ZP_07952435.1| rpiR family Helix-turn-helix domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316917792|gb|EFV39135.1| rpiR family Helix-turn-helix domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 293

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++  +  V I G+G SG     +   L   G     V    
Sbjct: 121 LSETLNLLDMQQVSLVVDALRNSQS-VYIFGVGSSGITAEDMKHKLMRIGLRVDAVTNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ I +S SG S+E    L  A++     +A+T    S ++  AD  L
Sbjct: 180 FMYMQATLLKAGDVAIAISHSGDSNETVHALKLAKQAGATTVALTHNLGSPLSETADFSL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                  +         +   QL + D L   L+++
Sbjct: 240 INGNRQGTLQGD--SMGTKTAQLFVIDLLYTLLVQA 273


>gi|294617354|ref|ZP_06696991.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1679]
 gi|291596382|gb|EFF27638.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1679]
          Length = 272

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/152 (24%), Positives = 64/152 (42%), Gaps = 4/152 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L S+++     + + A++ I   K  + I G+G SG+    L +     G  +  V  
Sbjct: 97  EALYSTIRLLDEEKLNEAIKMITQSKN-IYIFGVGSSGNTSLDLENMFLRVGVQAKAVLD 155

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                    ++T +DL+I+ S SG + +    L  A++    +IAIT+   S +   AD+
Sbjct: 156 PHFQAQVASLLTVNDLVIIFSLSGKTKDTYDSLKIAKKNGAKIIAITNYIHSPIGKSADL 215

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           VL    +              I QL I D L 
Sbjct: 216 VLQTAIDEF---LNGGSLAGKISQLYICDLLV 244


>gi|258423689|ref|ZP_05686576.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9635]
 gi|257846081|gb|EEV70108.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9635]
          Length = 293

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 43/208 (20%), Positives = 81/208 (38%), Gaps = 12/208 (5%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           ++      K+ +     LM N + +     +     R L+   + L           +++
Sbjct: 72  INISKYVPKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELND-------KTIDQ 124

Query: 60  IKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           I     R   + I G G S  + + L   L+  G     V         L     +D +I
Sbjct: 125 ICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVI 184

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +++ +G+  E+++++     + IP+I ITS   + VA  ++IVLT  K  +     +  T
Sbjct: 185 LITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGK-TDENEMHMGAT 243

Query: 177 TSAIMQLAIGDALAIALLESRNFSENDF 204
           TS   Q+   D L    +     +  DF
Sbjct: 244 TSLFAQMFTIDILYYRYVSLNYHASLDF 271


>gi|154148845|ref|YP_001407266.1| KpsF/GutQ [Campylobacter hominis ATCC BAA-381]
 gi|153804854|gb|ABS51861.1| KpsF/GutQ [Campylobacter hominis ATCC BAA-381]
          Length = 84

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKV 295
           +  AI  ++  + G V +VD+  +L  I+++GD+ R       D+N  +V +   KNPKV
Sbjct: 1   MKIAINSITHGKLGNVLLVDKNGELVAILSDGDLRRALMDKNFDINNKAV-NFASKNPKV 59

Query: 296 I-LEDTLLTVAMQLLRQHNISVLMV 319
           I   + L + A++++  + I +L+V
Sbjct: 60  IDNPEMLASRALEIIENYKIQMLIV 84


>gi|114798767|ref|YP_761153.1| RpiR family transcriptional regulator [Hyphomonas neptunium ATCC
           15444]
 gi|114738941|gb|ABI77066.1| transcriptional regulator, RpiR family [Hyphomonas neptunium ATCC
           15444]
          Length = 277

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 3/161 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            G+ +L  +L    +     AVE I+A   R+ I GIG S  +       +   G  +  
Sbjct: 99  AGVQALRDTLSVVDADAIDLAVETIRAAD-RIEIYGIGSSAPVAEDAQYRMLRIGIDARV 157

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V  +            +  ++ +S SG++ E  +    A       I IT+   S +  +
Sbjct: 158 VVDSHIQAISASRTGPNVAVLTISHSGATHETLSATRLAHEAGAKTIVITNFANSPIQAY 217

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ADI L                TS I QL + D L  AL  +
Sbjct: 218 ADIKLYT--MSRETRFRTEAMTSRIAQLCVIDTLIAALAMA 256


>gi|170725056|ref|YP_001759082.1| CBS domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169810403|gb|ACA84987.1| CBS domain containing protein [Shewanella woodyi ATCC 51908]
          Length = 636

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 52/125 (41%), Gaps = 8/125 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   +     VM +      V+    +  A  I+       + V  +  +L G+++   
Sbjct: 499 ALKETYKSVEQVMSTNIFS--VRGDDLIDLAAKIMHWNNVRHLPVESDSGELIGVLSYRQ 556

Query: 272 I-----FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           I           D++ + V++VM   P  I     +  A++L+R++ IS L VVD+    
Sbjct: 557 ILDIYGRYASSGDVHLVPVKEVMNAKPITITPRGSIGEAIKLMRENLISALPVVDN-GHL 615

Query: 327 IGIVH 331
           +G++ 
Sbjct: 616 MGMMT 620



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            SVE VM  N   +  D L+ +A +++  +N+  L V  D  + IG++ +  +L
Sbjct: 505 KSVEQVMSTNIFSVRGDDLIDLAAKIMHWNNVRHLPVESDSGELIGVLSYRQIL 558



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 1/67 (1%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                           +     + +AI ++ E     + VVD    L G++TE ++F+ +
Sbjct: 570 VHLVPVKEVMNAKPITITPRGSIGEAIKLMRENLISALPVVD-NGHLMGMMTEAELFKEY 628

Query: 277 HKDLNTL 283
              L+ L
Sbjct: 629 SSLLDGL 635


>gi|325264166|ref|ZP_08130898.1| putative transcriptional regulator, RpiR family [Clostridium sp.
           D5]
 gi|324030650|gb|EGB91933.1| putative transcriptional regulator, RpiR family [Clostridium sp.
           D5]
          Length = 291

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 63/173 (36%), Gaps = 6/173 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +ST+    + +  E   +      +   +      A+E I     ++   G+G S  + S
Sbjct: 99  DSTIDVVKKVMQIEYEDIKFTLDMINEHI---VSEALELITNC-NKLAFFGVGSSALVAS 154

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                    G  ++      +       +  +D+   +S SG S      +  A R    
Sbjct: 155 MAKEHFLHYGKSAYAEFEGLSQIVLANTLGPEDVAFAISISGRSKVPLNAMEVAVRSGAH 214

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            I +T +  S +A  +D VL      +        T + I+ ++I DALA+A 
Sbjct: 215 TICLTQDPSSPLAKMSDCVLQ--VYRKDHSIDDLGTATRIVHISIIDALAVAY 265


>gi|322833120|ref|YP_004213147.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321168321|gb|ADW74020.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 284

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 39/178 (21%), Positives = 66/178 (37%), Gaps = 6/178 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
             +S  Q   + +  E +G +     L    +     AV  +   + R+ I G G S  +
Sbjct: 93  DNDSPKQILQKLLEFEVKGATETTQLLS---AATLEQAVSILSQAR-RIDIYGTGASALV 148

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                  L   G  +    + + S      +T  D  + +S SG + ++   L  A+   
Sbjct: 149 AQDFCQKLRRIGVVAQTFGSTDESLVSACQLTNADAALAISHSGQTADVIEALTQAKAAG 208

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              +AIT+  ++ +A  ADIVL             A   S   QL I D L I + + 
Sbjct: 209 ATTLAITANGRAALARKADIVLRTS--SREMGFRAAAMASRTSQLLIIDCLFIGVAQR 264


>gi|312795956|ref|YP_004028878.1| hypothetical protein [Burkholderia rhizoxinica HKI 454]
 gi|312167731|emb|CBW74734.1| CBS domain containing protein [Burkholderia rhizoxinica HKI 454]
          Length = 196

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 64/135 (47%), Gaps = 6/135 (4%)

Query: 208 HPGGKLGTLFVCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           H   +     +  SD++   G+++  V    PL +A+  ++E   G + V+ E   L G+
Sbjct: 35  HEAAQCKEEAMRVSDILKVKGNALYTVTPDTPLSEAVQTMAEHDIGSLVVI-EFGDLVGM 93

Query: 267 ITEGDI---FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T  +I    R+    ++ +++  VM  +P     +T +    +++ + +   L V++  
Sbjct: 94  LTFREIILTLRDRGGSVDAVTIRKVMDDHPLTCTPETDINEVRRMMLERHARYLPVMEK- 152

Query: 324 QKAIGIVHFLDLLRF 338
           +  +G++ F D+ R 
Sbjct: 153 RTLMGVISFYDVARA 167


>gi|312866291|ref|ZP_07726509.1| CBS domain protein [Streptococcus downei F0415]
 gi|311097985|gb|EFQ56211.1| CBS domain protein [Streptococcus downei F0415]
          Length = 219

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 14/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  I+ E+    + V+ E  KL GI+T G +  N             +  L
Sbjct: 14  VSPDTTVAHAADIMREQGLRRLPVI-EDDKLVGIVTAGTMAENSPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   + D+MIK+   +     +  A+ L+  H + VL V ++     GI+   D+ R
Sbjct: 73  NKTKIRDIMIKDVITVSPFASVEDAIYLMMTHKVGVLPV-EENGMVSGIITDKDIFR 128



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    +  DT +  A  ++R+  +  L V++D  K +GIV 
Sbjct: 1   MAVKDFMTRKVVYVSPDTTVAHAADIMREQGLRRLPVIEDD-KLVGIVT 48



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     + DAI ++   + G + V +E   + GIIT+ DIFR F
Sbjct: 81  MIKDVITVSPFASVEDAIYLMMTHKVGVLPV-EENGMVSGIITDKDIFRTF 130


>gi|258545833|ref|ZP_05706067.1| inosine-5'-monophosphate dehydrogenase [Cardiobacterium hominis
           ATCC 15826]
 gi|258518849|gb|EEV87708.1| inosine-5'-monophosphate dehydrogenase [Cardiobacterium hominis
           ATCC 15826]
          Length = 483

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 38/182 (20%), Positives = 61/182 (33%), Gaps = 16/182 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  +         P  +A M       LAIAL +          ++H           
Sbjct: 27  VDLSVQLARDIRLNIPLFAAAMDTVSEARLAIALAQLGGI-----AIIHKNMTPEQQAAE 81

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              V      +            + +   I  E +F  + V+ E  K+ GI+T  D+ R 
Sbjct: 82  VRKVKRFESGVIRDPLTTTPNTTVGEVRAITQEHKFSGLPVL-ENGKVVGIVTRRDL-RY 139

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              D+    V +VM          E+        LL +H I  +++VDD     G+V   
Sbjct: 140 MEDDVL---VREVMTPQARLVTAQENASTEEIKGLLHKHRIEKVLLVDDGFTLKGLVTVK 196

Query: 334 DL 335
           DL
Sbjct: 197 DL 198


>gi|297620162|ref|YP_003708267.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297379139|gb|ADI37294.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 136

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 7/100 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIK 291
           K    ++DA   + + R  C+ +V+    L GIIT  D+  N  KD+ TL  ++E+VM K
Sbjct: 20  KTNESVVDAFENMLKNRVSCLPIVNIDNVLMGIITTTDVGYNLIKDVYTLETTLEEVMTK 79

Query: 292 NPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKA 326
           +   +     +  A+Q +  +      I+ L VVDD  K 
Sbjct: 80  DVISVKPSETIKQALQKMDINGTASEIINQLPVVDDDGKL 119



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 27/51 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           ++E++MIKN      +  +  A + + ++ +S L +V+     +GI+   D
Sbjct: 7   TIEEIMIKNVISAKTNESVVDAFENMLKNRVSCLPIVNIDNVLMGIITTTD 57


>gi|116749632|ref|YP_846319.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698696|gb|ABK17884.1| CBS domain containing membrane protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 152

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 54/132 (40%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V     ++ A  +L +K    + V+D+   L GI+ + D+                    
Sbjct: 15  VSPQTEIVQAAKLLLDKHINGLPVIDDRGNLVGILCQSDLIAQQKRFPLPSVFNLLDSFI 74

Query: 274 -----RNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                  F K+   ++ ++V + M + P  +  DT +    +L+   N+  L VVD   K
Sbjct: 75  PLTSPSRFEKEVQKISAVTVGEAMTREPVTVSPDTTIEEVARLMVNKNLHTLPVVD-GNK 133

Query: 326 AIGIVHFLDLLR 337
            IGI+   D+LR
Sbjct: 134 LIGIIGKEDVLR 145



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L V D+M ++   +   T +  A +LL   +I+ L V+DD    +GI+   DL+
Sbjct: 2   LRVADIMTRDVISVSPQTEIVQAAKLLLDKHINGLPVIDDRGNLVGILCQSDLI 55



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V     + +   ++  K    + VVD G KL GII + D+ R  
Sbjct: 98  MTREPVTVSPDTTIEEVARLMVNKNLHTLPVVD-GNKLIGIIGKEDVLRTL 147


>gi|48477960|ref|YP_023666.1| CBS domain-containing protein [Picrophilus torridus DSM 9790]
 gi|48430608|gb|AAT43473.1| CBS domain containing protein [Picrophilus torridus DSM 9790]
          Length = 143

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 3/109 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     +  A +I+S +  G + V    +KL GI+TE DI R   K +    +V  +  K
Sbjct: 18  INDNESIEKAASIMSGENKGSILV-GTPEKLTGIVTERDIIRAIAKSIPVNDNVSKIATK 76

Query: 292 N-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           N    I ED  +T A  L+ +HNI  L+V     K  GI+   DL R  
Sbjct: 77  NNLIFIDEDEPITKAAALMGKHNIRHLIVKSKSGKVTGIISTRDLFREK 125



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLR-QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV D M K P  I ++  +  A  ++  ++  S+L  V   +K  GIV   D++R 
Sbjct: 6   SVRDAMNKRPLYINDNESIEKAASIMSGENKGSIL--VGTPEKLTGIVTERDIIRA 59


>gi|327310241|ref|YP_004337138.1| glutamine amidotransferase class-II [Thermoproteus uzoniensis
           768-20]
 gi|326946720|gb|AEA11826.1| glutamine amidotransferase class-II [Thermoproteus uzoniensis
           768-20]
          Length = 588

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 57/131 (43%), Gaps = 1/131 (0%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  ++      I      V + G G S H G   +   A  GTP   + AAE  H  L  
Sbjct: 266 LMEKYLRLASMIVQGAKNVYVIGNGTSLHAGMVSSYYFADVGTPVDVISAAEFPHYALEN 325

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE- 167
           +    +I+ +S SG + ++   +  ARR    +I +T+   S +A  +++ L +   PE 
Sbjct: 326 VGTGTVILAISQSGETSDVIRSIRAARRQGAVIIGVTNSVSSRLAIESNVYLPITAGPEM 385

Query: 168 SCPHGLAPTTS 178
           + P     T++
Sbjct: 386 AVPATKTFTST 396


>gi|157145371|ref|YP_001452690.1| DNA-binding transcriptional regulator HexR [Citrobacter koseri ATCC
           BAA-895]
 gi|157082576|gb|ABV12254.1| hypothetical protein CKO_01111 [Citrobacter koseri ATCC BAA-895]
          Length = 289

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVESYTGKIFESAMASLDHVRQSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMISR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|16263041|ref|NP_435834.1| hypothetical protein SMa1086 [Sinorhizobium meliloti 1021]
 gi|14523696|gb|AAK65246.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
          Length = 224

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           +     +  A   + E +   + V D+  +L G+++EGD+ R     L            
Sbjct: 14  ISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLRRAELGLVSRRDIAGVRAK 73

Query: 281 -------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  ++  V DVM +    + ED  +    +L+    I  + V+   +  +GI+   
Sbjct: 74  PEAFIKGHSWRVGDVMTQPVVTVDEDMPVGRVAELMAAKGIKRIPVMRAEEM-VGIISRS 132

Query: 334 DLLRF 338
           D+LR 
Sbjct: 133 DILRA 137



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D+M K    I  D  ++ A + + ++ IS L V DD  + +G++   DLLR
Sbjct: 3   ARDIMKKRVLSISPDHSVSHAARAMLENQISGLPVCDDRGRLVGMLSEGDLLR 55


>gi|229520422|ref|ZP_04409847.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae TM 11079-80]
 gi|229342520|gb|EEO07513.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae TM 11079-80]
          Length = 301

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 134 QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 192

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 193 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 251

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 252 --MPMASRVVQMTVIDVLATGFTLRRG 276


>gi|205352407|ref|YP_002226208.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 287/91]
 gi|205272188|emb|CAR37046.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|326627459|gb|EGE33802.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Gallinarum str. 9]
          Length = 289

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +    L  +  SL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 97  KIFESAMASLDHVRQSLDKS---AVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              + DD+++++S +G +  L  +   AR     +IA+TS  
Sbjct: 153 FNVPVIYSDDIVLQRMSCMSCSDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTS-A 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +A  A + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 212 GTPLAREATLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|20090252|ref|NP_616327.1| hypothetical protein MA1391 [Methanosarcina acetivorans C2A]
 gi|19915246|gb|AAM04807.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 291

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 2/123 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                      +      LV +   + +A  +          V D+  K+ GIIT  DI 
Sbjct: 165 MISLPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPVEDK-GKIVGIITYTDIA 223

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
               +    + V+D+M K    +  D  L   ++L  ++N+  L+V        G +   
Sbjct: 224 HAIAQGKPNVKVKDIMTKELITVDGDMQLYDVVKLFHKYNVGRLIVT-INGVPKGTLSKT 282

Query: 334 DLL 336
           D+L
Sbjct: 283 DVL 285



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+  M   P ++  +  +  A +L  ++N+    V +D  K +GI+ + D+   
Sbjct: 168 LPKKHVKHYMKYPPLLVNLNASIQEATRLFIRNNVHGAPV-EDKGKIVGIITYTDIAHA 225


>gi|313672827|ref|YP_004050938.1| cbs domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
 gi|312939583|gb|ADR18775.1| CBS domain containing membrane protein [Calditerrivibrio
           nitroreducens DSM 19672]
          Length = 136

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 46/119 (38%), Gaps = 15/119 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------KD 279
                + +    L EK+   V V+++  ++ G+ +E D+                   K+
Sbjct: 15  HEDESIREVTLRLREKKITGVPVLNDNGEVVGVFSETDLLNRLPDILNDADKIPLVDVKE 74

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+ VM      +  DT +    ++     I  + V+ +  K +GIV   DLL+ 
Sbjct: 75  LTDPPVKTVMSSPAITVTPDTDIKDVAKIFLYKYIHRVPVL-EGDKLVGIVSLGDLLKA 132



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+++M  N     ED  +      LR+  I+ + V++D  + +G+    DLL
Sbjct: 1   MKVKEIMKTNVITAHEDESIREVTLRLREKKITGVPVLNDNGEVVGVFSETDLL 54


>gi|297154760|gb|ADI04472.1| hypothetical protein SBI_01351 [Streptomyces bingchenggensis BCW-1]
          Length = 237

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 45/128 (35%), Gaps = 17/128 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
               +  V+   P  +  ++LS      V V D      G+++E D+ R   +       
Sbjct: 12  MTHDVVTVRPDTPFKEITSVLSSHGISAVPVADARGAPMGLVSEADLLRKQAEQRAGGQE 71

Query: 281 ------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                          +   +M         D  +  A + + +H +  L+VVD+    IG
Sbjct: 72  APPGWPREKAKARAENAAGLMTAPVVTAHADWTVAQAAREMDRHRVKRLLVVDETDSIIG 131

Query: 329 IVHFLDLL 336
           IV   DL+
Sbjct: 132 IVSRSDLI 139



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V +VM  +   +  DT       +L  H IS + V D     +G+V   DLLR 
Sbjct: 7   TVSEVMTHDVVTVRPDTPFKEITSVLSSHGISAVPVADARGAPMGLVSEADLLRK 61


>gi|170078108|ref|YP_001734746.1| GGDEF domain-containing protein [Synechococcus sp. PCC 7002]
 gi|169885777|gb|ACA99490.1| GGDEF domain protein [Synechococcus sp. PCC 7002]
          Length = 519

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 8/116 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVED 287
               ++     DA+ + S +      +V  GQ+L+GI+TE D+ +     ++   ++++ 
Sbjct: 38  KRTCELQDKTSDALEVNSSR--ASCILVMAGQQLQGIVTERDLLKWVILDQNWQQITLKQ 95

Query: 288 VMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +M  +   +  D  LT     QLL++H I  L V+D   K  G++    LLR G+I
Sbjct: 96  IMTTSVISLTWDQSLTPLHISQLLQKHRIRHLPVLDTEGKLFGLIT-HRLLR-GVI 149



 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/112 (27%), Positives = 48/112 (42%), Gaps = 9/112 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKL------KGIITEGDIF--RNFHKDLNTLSVE 286
               +     ++ E R G + +V     L       GI+TE DI   R+   DL  ++ E
Sbjct: 173 PQQSMWHLAKVMMECRVGSIVIVKPHPTLEQAWFPLGIVTEQDILHLRSLDVDLKKITAE 232

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             M + P  I     L  A QL+ QH    L+VV +  + +G+V   +LL  
Sbjct: 233 QTMTR-PIKIAVHRSLIEAKQLMEQHQTHRLIVVGEHHELLGLVTQSNLLEA 283


>gi|147921757|ref|YP_684421.1| hypothetical protein LRC65 [uncultured methanogenic archaeon RC-I]
 gi|110619817|emb|CAJ35095.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 157

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 54/146 (36%), Gaps = 37/146 (25%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              ++        + D I ++SEK    + V+D+  +L GI+TEGDI +           
Sbjct: 7   MTTTVITCTPSDAIQDVIKLMSEKNVSGIPVMDKD-RLAGIVTEGDILKLLAVPPRSDTL 65

Query: 278 ---------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                       DL    V+D+M K       +T +  A   + 
Sbjct: 66  WLPSPLEVILEIPFRGLMQIRDLQNAYTDLGHKPVKDIMHKEVWTTTPETDIEDAAAEMV 125

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
           + N++ L V+    + +GIV   D++
Sbjct: 126 RRNVNRLPVM-KGDQLVGIVTRDDII 150



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M            +   ++L+ + N+S + V+D   +  GIV   D+L+ 
Sbjct: 1   MKVGEIMTTTVITCTPSDAIQDVIKLMSEKNVSGIPVMDKD-RLAGIVTEGDILKL 55


>gi|217970688|ref|YP_002355922.1| hypothetical protein Tmz1t_2287 [Thauera sp. MZ1T]
 gi|217508015|gb|ACK55026.1| CBS domain containing membrane protein [Thauera sp. MZ1T]
          Length = 135

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 48/108 (44%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVM 289
                L+ A+ +L ++      VVDE ++L G ++E D  +          +   VED M
Sbjct: 19  SPDTDLLKAVRLLLQRGLSGAPVVDENRRLIGFLSEKDCLKAALDASYFRRDEGKVEDFM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++   I     L  A++L    N  +L VV+   + IG +   D+L+
Sbjct: 79  NRDVVSIRASASLIDAIELFLARNHHILPVVEGA-RLIGQISRHDILK 125



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 20/61 (32%), Positives = 33/61 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L +L V+D M+ +      DT L  A++LL Q  +S   VVD+ ++ IG +   D L+  
Sbjct: 2   LGSLLVKDYMVGDHLAFSPDTDLLKAVRLLLQRGLSGAPVVDENRRLIGFLSEKDCLKAA 61

Query: 340 I 340
           +
Sbjct: 62  L 62


>gi|21227406|ref|NP_633328.1| hypothetical protein MM_1304 [Methanosarcina mazei Go1]
 gi|20905770|gb|AAM31000.1| conserved protein [Methanosarcina mazei Go1]
          Length = 281

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 58/121 (47%), Gaps = 11/121 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + ++ I  P+  A  ++   R   + V++E  K+ GI+T+ DI             
Sbjct: 7   MSSPVYVINIDEPVSHARNLMLRHRISTLLVLNE-GKMVGIVTKTDITNRLAQAEPLWRR 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + ++ +M ++   I  +  ++ A+ L+ ++ +  + VV +    +GI+   D++R
Sbjct: 66  RPIDQIPIKLLMTESVITIYPEASISQAVTLMLENGVHNIPVVKND--VVGIITRTDIVR 123

Query: 338 F 338
           +
Sbjct: 124 Y 124



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 47/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
             +S+  +     +  A+T++ E     + VV     + GIIT  DI R    H D    
Sbjct: 77  MTESVITIYPEASISQAVTLMLENGVHNIPVV--KNDVVGIITRTDIVRYVAEHADEIET 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +M ++   +     +   +  L ++ I  ++V DD  K +G+V    L
Sbjct: 135 KIPRLMTEDIVSVHRHHTINHVIDELNKNEIERVIVKDDAGKPVGLVSRRSL 186



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M     VI  D  ++ A  L+ +H IS L+V+++  K +GIV   D+ 
Sbjct: 3   VADIMSSPVYVINIDEPVSHARNLMLRHRISTLLVLNE-GKMVGIVTKTDIT 53



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 29/134 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     +   I  L++     V V D+  K  G+++   +  N   D             
Sbjct: 147 VHRHHTINHVIDELNKNEIERVIVKDDAGKPVGLVSRRSLALNLLTDNEGKLSTKSIKMT 206

Query: 283 ------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                             L  ED+MI     I  +  ++ A + L +  I+ L V D   
Sbjct: 207 RKSSPAGQKTYRYVKEVPLIAEDIMISPIMSIDVNEKISNAAKKLIEEGINALPVSDGED 266

Query: 325 KAIGIVHFLDLLRF 338
             IG++   D+++ 
Sbjct: 267 -IIGMLSRTDIMKA 279


>gi|260426180|ref|ZP_05780159.1| CBS domain protein [Citreicella sp. SE45]
 gi|260420672|gb|EEX13923.1| CBS domain protein [Citreicella sp. SE45]
          Length = 144

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +  A  +L+E+R G V V ++GQ   GI++E DI R       D+    V+ +M
Sbjct: 18  VTPDATVAAAAKVLAERRIGGVVVSEDGQTPLGILSERDIVRVLGTDGPDVLAWRVDALM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++ K    D    V +  + +     L V+ +    +G++   D++  
Sbjct: 78  TRDLKTCSRDDDSNVVLARMTKGRFRHLPVI-EDGVMVGMISIGDVVAA 125



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D  +  A ++L +  I  ++V +D Q  +GI+   D++R
Sbjct: 16  VTVTPDATVAAAAKVLAERRIGGVVVSEDGQTPLGILSERDIVR 59


>gi|259501834|ref|ZP_05744736.1| transcription regulator [Lactobacillus antri DSM 16041]
 gi|259170159|gb|EEW54654.1| transcription regulator [Lactobacillus antri DSM 16041]
          Length = 277

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 41/187 (21%), Positives = 76/187 (40%), Gaps = 11/187 (5%)

Query: 17  SLMKNSTVQCALR----SIIAEKRGLSSLESSLQGE---LSFQFHCAVEKIKAIKGRVVI 69
           S +  S +  A R    SI+ E   +S  + SL      +S      + ++     +V I
Sbjct: 70  SYLTTSNLIQAKRLSESSILDE--VISYYKQSLAETKSLISLNQLKKITRLIRKANKVYI 127

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G  G+   +L   L   G  S  +  +        +I+  D I+  S SG++ E+  
Sbjct: 128 LGVGSFGYNAQELNQRLMRMGINSCAICDSSMMSIIDTIISPKDTILAFSVSGNTIEVCD 187

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +   R   + + +IT+ + SV+A  ++ +L +    +S  +      S      + D L
Sbjct: 188 AVQKCREKGVVITSITAFSNSVLAKRSNNILLIKNTEKSPNYN--FMNSQFTINYVIDLL 245

Query: 190 AIALLES 196
              LLE 
Sbjct: 246 TEILLEH 252


>gi|218531896|ref|YP_002422712.1| nucleotidyl transferase [Methylobacterium chloromethanicum CM4]
 gi|218524199|gb|ACK84784.1| Nucleotidyl transferase [Methylobacterium chloromethanicum CM4]
          Length = 360

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 9/101 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIK 291
           +    L + IT++         VVD    L G I++GDI R   +   L  L+V  VM  
Sbjct: 11  RADWTLREVITLIDRGNQKLAIVVDGSGHLLGTISDGDIRRALLRGETLEALAVT-VMNH 69

Query: 292 NPK---VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            P     +   + L    QL+R   IS + +VD+  + IG+
Sbjct: 70  RPAIGSTVAARSDLV---QLMRAKRISAVPIVDEDMRLIGL 107


>gi|149181080|ref|ZP_01859580.1| acetoin utilization protein [Bacillus sp. SG-1]
 gi|148851167|gb|EDL65317.1| acetoin utilization protein [Bacillus sp. SG-1]
          Length = 215

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED------ 287
           +    +  AI  L +K+   + +VD+   + GI+++ D+              +      
Sbjct: 15  RADDTIEQAIKTLRDKKIRHIPIVDDHMAVIGIVSDRDVKDGTPSIFQKDKAAEELQNPL 74

Query: 288 --VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M  N         +  A  L  +H+I  L +V    K +GI+   DLL
Sbjct: 75  KLIMKTNVITGHPLDFVEEAAALFYEHHIGCLPIV-KENKLVGIITETDLL 124



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M    + +  D  +  A++ LR   I  + +VDD    IGIV   D
Sbjct: 3   VEEIMKTEVETLRADDTIEQAIKTLRDKKIRHIPIVDDHMAVIGIVSDRD 52



 Score = 36.0 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + +A  +  E   GC+ +V +  KL GIITE D+    
Sbjct: 91  VEEAAALFYEHHIGCLPIV-KENKLVGIITETDLLYTL 127


>gi|121998929|ref|YP_001003716.1| multi-sensor hybrid histidine kinase [Halorhodospira halophila SL1]
 gi|121590334|gb|ABM62914.1| multi-sensor hybrid histidine kinase [Halorhodospira halophila SL1]
          Length = 1643

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LSVED 287
             PL+     L  A+  + E+      VVD+  +  GI+T+ DI +      +   ++E 
Sbjct: 140 QAPLLNPDATLRGAMAAMREQDQEAAVVVDDE-RPVGILTQKDIIKLLAAGTDLGCTLEA 198

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            M    + + E   +  A+   RQ  I  ++VVDD  +  G++
Sbjct: 199 CMSSPVETLHEQASIAEALSFCRQRRIKRVVVVDDAGRLTGVI 241



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 51/109 (46%), Gaps = 7/109 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVM-- 289
                ++D +  +   R   + +VD+  +L GI++  D+      ++   T S+ ++   
Sbjct: 80  SPDASVVDGLRAI-RNRGEHICLVDDRGELSGILSYTDLASGLDPNMLAQTQSIGELFRW 138

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + P  +  D  L  AM  +R+ +    +VVDD  + +GI+   D+++ 
Sbjct: 139 TQAPL-LNPDATLRGAMAAMREQDQEAAVVVDDE-RPVGILTQKDIIKL 185


>gi|118576993|ref|YP_876736.1| CBS domain [Cenarchaeum symbiosum A]
 gi|118195514|gb|ABK78432.1| CBS domain [Cenarchaeum symbiosum A]
          Length = 272

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 3/140 (2%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLI--DAITILSEKRFGCVAVV 257
           +  D       G+                S+  V  G           +     G V +V
Sbjct: 45  TARDAARFLGDGRTAGALDEVPVKHVMQKSVITVPEGSGDRHSQCAARMEAFGIGAVVLV 104

Query: 258 DEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           D+   + GI+T+ DI R F         V + M +          +  A  ++ ++ +S 
Sbjct: 105 DDRGMITGIVTKTDITREFAAAHGGRFKVGEFMSRGALTCRGSDTVRFAADVMNRNRVSR 164

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           L+V D+    +G++    LL
Sbjct: 165 LVVTDESGVPVGVITTGTLL 184



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLSVED 287
           V     L +A+ ++ E     V VV    +  G++T  D  R          L+ + V+ 
Sbjct: 11  VGPESSLSEALGVMRENGVKHV-VVALDGRPVGVVTARDAARFLGDGRTAGALDEVPVKH 69

Query: 288 VMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM K+   + E +    +     +    I  +++VDD     GIV   D+ R 
Sbjct: 70  VMQKSVITVPEGSGDRHSQCAARMEAFGIGAVVLVDDRGMITGIVTKTDITRE 122



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 38/111 (34%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-----VED 287
            +    +  A  +++  R   + V DE     G+IT G +  +       L      V  
Sbjct: 144 CRGSDTVRFAADVMNRNRVSRLVVTDESGVPVGVITTGTLLHHTEYFSGGLPESGADVSR 203

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +          +  L  A  L+  + IS L V D      G+    D++R 
Sbjct: 204 LTDGGAVTAPREGDLAAAAGLMISNKISGLPVTDPDGSLAGVTSTFDVVRA 254


>gi|17544902|ref|NP_518304.1| hypothetical protein RSc0183 [Ralstonia solanacearum GMI1000]
 gi|17427191|emb|CAD13711.1| putative signal-transduction protein containing a cbs domain
           [Ralstonia solanacearum GMI1000]
          Length = 165

 Score = 73.4 bits (179), Expect = 4e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 53/119 (44%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF---HKD 279
               I  +     L  A  ++ ++    + V + G    ++ GI+T+ D+  +      D
Sbjct: 7   CSRRIVHIPASAALQMAARLMRDQCLRALFVTEHGVTGMRVVGIVTDRDMVVHGLANRAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               ++ +VM +    I    +++ A++ +  H +  L V+DD Q+ IG++   D +R 
Sbjct: 67  CAQTTISEVMTRGVLTIQGHAVISEALRTMLGHGLHRLAVIDDQQQLIGMLTLDDTIRA 125


>gi|315639774|ref|ZP_07894912.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus italicus DSM 15952]
 gi|315484465|gb|EFU74923.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus italicus DSM 15952]
          Length = 287

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 64/202 (31%), Gaps = 6/202 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKR-GLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
           K V      +  N + Q     I    +  L+   S L  +    F  A+  +K     +
Sbjct: 83  KEVPSSYADVQPNESFQSIKEKITTNAQISLTETASILNED---AFEKAIALLKQAPA-I 138

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
           +  G+G S      +    +  G   F           +       L+ ++S SG + EL
Sbjct: 139 LTFGVGASALTAQDIVHKWSRIGQFVFHERDIHLFLPQVINAPAHSLLWLISNSGKTPEL 198

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +   A++  +P++ +T    + +   A + L     P    +  A T S + Q    D
Sbjct: 199 LYLAEIAQKRQLPILTLTQLGNNPLHELATVGLQTA-RPMEAENRSAATNSILSQFLTVD 257

Query: 188 ALAIALLESRNFSENDFYVLHP 209
            L    +               
Sbjct: 258 TLFYLYISQNQQYTKQISESKQ 279


>gi|297626277|ref|YP_003688040.1| transcriptional regulator [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
 gi|296922042|emb|CBL56606.1| transcriptional regulator [Propionibacterium freudenreichii subsp.
           shermanii CIRM-BIA1]
          Length = 216

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 49/124 (39%), Gaps = 14/124 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           H   +   V     +  A+ ++       + V+    K+ G+I   DI +          
Sbjct: 6   HMTANPFTVTPDDTVPKAVEVMKLNHVRHLPVL-RDGKVVGVIANSDIAKASPSQATSFS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   + L V  VM ++   I  D LL  A  L+R H I ++ V+ +  K +G++  
Sbjct: 65  IGEITYLFSKLKVGKVMSRDVYTIAADALLEQAAVLMRDHKIEMVPVM-EGDKLVGVITE 123

Query: 333 LDLL 336
            D+L
Sbjct: 124 SDIL 127



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D M  NP  +  D  +  A+++++ +++  L V+    K +G++   D+ + 
Sbjct: 3   IRDHMTANPFTVTPDDTVPKAVEVMKLNHVRHLPVL-RDGKVVGVIANSDIAKA 55


>gi|167746311|ref|ZP_02418438.1| hypothetical protein ANACAC_01020 [Anaerostipes caccae DSM 14662]
 gi|167654304|gb|EDR98433.1| hypothetical protein ANACAC_01020 [Anaerostipes caccae DSM 14662]
          Length = 179

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/175 (23%), Positives = 69/175 (39%), Gaps = 10/175 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  LE S       Q    ++KIK+ K R+ + G G+SG +   LA  L   G  ++ V 
Sbjct: 7   IKELEQSADRIPEHQISNLIQKIKSHK-RIFVYGTGRSGLMLKALAMRLMQIGLDAYVVG 65

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC--H 155
                      + + DL+IV S SG +  +      A++    LI I+S   S +     
Sbjct: 66  ETTTP-----SVEKGDLLIVASASGETGSVCMTAQSAKKQGADLIVISSAEGSTLGKIQT 120

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            DI +    +  +    + P  S   Q+   + DA  + +      S +D    H
Sbjct: 121 PDITIESATKFSTSKTSIQPLGSLFEQMLLIVFDAAVLEMSREEPGSNDDMAKRH 175


>gi|74316108|ref|YP_313848.1| CBS signal-transduction protein [Thiobacillus denitrificans ATCC
           25259]
 gi|74055603|gb|AAZ96043.1| CBS signal-transduction protein [Thiobacillus denitrificans ATCC
           25259]
          Length = 629

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 4/126 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                 + +                  +  A+  +  +  G +  V E    +GI+T  D
Sbjct: 159 SAEQQSMSSRLAAIVRREPVTCSPQSSVRQALQSMKTQGVGAMVAV-ENGVPRGILTLHD 217

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +              V D+M      +    L   A   + +  I  ++V D+  +  G+
Sbjct: 218 VLDRVALAGADLERPVIDIMSTQLTTLPPHALAHDAALTMAKEGIRHVLVTDN-GRLTGV 276

Query: 330 VHFLDL 335
           V   DL
Sbjct: 277 VSEKDL 282



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 27/73 (36%), Gaps = 10/73 (13%)

Query: 273 FRNFHKDLNTLSVED---------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            R  H   +  S E          ++ + P      + +  A+Q ++   +  ++ V + 
Sbjct: 148 LRRIHAGYSRASAEQQSMSSRLAAIVRREPVTCSPQSSVRQALQSMKTQGVGAMVAV-EN 206

Query: 324 QKAIGIVHFLDLL 336
               GI+   D+L
Sbjct: 207 GVPRGILTLHDVL 219


>gi|297565407|ref|YP_003684379.1| putative signal transduction protein with CBS domains [Meiothermus
           silvanus DSM 9946]
 gi|296849856|gb|ADH62871.1| putative signal transduction protein with CBS domains [Meiothermus
           silvanus DSM 9946]
          Length = 208

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 46/112 (41%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------HKDLNTLSVE 286
           V     L  A  ++ + +   + V  +  KL GI+T+ DI                 +V 
Sbjct: 14  VDERATLRSAYQVMQDHQIRHLPVT-KAGKLVGIVTDRDIRLAVSPLAEGGPRHLEAAVG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +M +          +  A +L+R+  I  L V+ + ++ +GIV  +DLL  
Sbjct: 73  SIMSQPVLSADPLDPVEEAARLMRRRKIGALPVL-EGEELVGIVTGIDLLDA 123



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+DVM      + E   L  A Q+++ H I  L V     K +GIV   D+
Sbjct: 3   VKDVMRYPVLTVDERATLRSAYQVMQDHQIRHLPVT-KAGKLVGIVTDRDI 52


>gi|225858564|ref|YP_002740074.1| AcuB family protein [Streptococcus pneumoniae 70585]
 gi|225721555|gb|ACO17409.1| AcuB family protein [Streptococcus pneumoniae 70585]
          Length = 218

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +     ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHTADLMREQGLHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ + 
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQA 129



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++    L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHTADLMREQGLHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQAF 130


>gi|87161144|ref|YP_494899.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|257423798|ref|ZP_05600227.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257426478|ref|ZP_05602880.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257429117|ref|ZP_05605504.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257431763|ref|ZP_05608126.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257434723|ref|ZP_05610774.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M876]
 gi|257794658|ref|ZP_05643637.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9781]
 gi|258408738|ref|ZP_05681022.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9763]
 gi|258422336|ref|ZP_05685248.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9719]
 gi|258439726|ref|ZP_05690472.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9299]
 gi|258442718|ref|ZP_05691278.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A8115]
 gi|258446583|ref|ZP_05694738.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6300]
 gi|258450299|ref|ZP_05698391.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6224]
 gi|258452797|ref|ZP_05700793.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5948]
 gi|258455328|ref|ZP_05703288.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5937]
 gi|282893756|ref|ZP_06301988.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A8117]
 gi|282902222|ref|ZP_06310115.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282906656|ref|ZP_06314504.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909631|ref|ZP_06317440.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282911876|ref|ZP_06319672.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282915169|ref|ZP_06322946.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282917665|ref|ZP_06325416.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus D139]
 gi|282920895|ref|ZP_06328613.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C427]
 gi|282925199|ref|ZP_06332858.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A9765]
 gi|282925801|ref|ZP_06333449.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C101]
 gi|282926864|ref|ZP_06334491.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A10102]
 gi|283767406|ref|ZP_06340321.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus H19]
 gi|283959096|ref|ZP_06376537.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|293497569|ref|ZP_06665423.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|293511146|ref|ZP_06669843.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M809]
 gi|293549753|ref|ZP_06672425.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|295428897|ref|ZP_06821521.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|87127118|gb|ABD21632.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus USA300_FPR3757]
 gi|257272816|gb|EEV04918.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 55/2053]
 gi|257276109|gb|EEV07560.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 65-1322]
 gi|257279598|gb|EEV10185.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus 68-397]
 gi|257282642|gb|EEV12774.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus E1410]
 gi|257285319|gb|EEV15435.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M876]
 gi|257788630|gb|EEV26970.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9781]
 gi|257840421|gb|EEV64881.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9763]
 gi|257841767|gb|EEV66204.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9719]
 gi|257847502|gb|EEV71504.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A9299]
 gi|257851839|gb|EEV75773.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A8115]
 gi|257854651|gb|EEV77599.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6300]
 gi|257856391|gb|EEV79300.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A6224]
 gi|257859560|gb|EEV82412.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5948]
 gi|257862539|gb|EEV85307.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus A5937]
 gi|282312630|gb|EFB43034.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C101]
 gi|282315310|gb|EFB45694.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus C427]
 gi|282318420|gb|EFB48779.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus D139]
 gi|282320890|gb|EFB51224.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M899]
 gi|282323572|gb|EFB53888.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WBG10049]
 gi|282326205|gb|EFB56509.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus WW2703/97]
 gi|282329555|gb|EFB59076.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282591315|gb|EFB96388.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A10102]
 gi|282592600|gb|EFB97609.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A9765]
 gi|282596681|gb|EFC01640.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus C160]
 gi|282763814|gb|EFC03942.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus A8117]
 gi|283461285|gb|EFC08369.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus H19]
 gi|283788688|gb|EFC27515.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus A017934/97]
 gi|290918800|gb|EFD95876.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus aureus subsp. aureus M1015]
 gi|291096500|gb|EFE26758.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466133|gb|EFF08662.1| phosphosugar-binding transcriptional regulator [Staphylococcus
           aureus subsp. aureus M809]
 gi|295127246|gb|EFG56888.1| RpiR family phosphosugar-binding transcriptional regulator
           [Staphylococcus aureus subsp. aureus EMRSA16]
          Length = 293

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 41/193 (21%), Positives = 77/193 (39%), Gaps = 12/193 (6%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           ++      K+ +     LM N + +     +     R L+   + L           +++
Sbjct: 72  INISKYVPKASSIYNVELMNNESTESLRTKLHTRTTRALNHANNELND-------KTIDQ 124

Query: 60  IKAIKGR---VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           I     R   + I G G S  + + L   L+  G     V         L     +D +I
Sbjct: 125 ICHCLKRSETIFIYGFGASFVVATDLYQKLSRIGLNIQLVQETHIFATLLATHNSNDSVI 184

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           +++ +G+  E+++++     + IP+I ITS   + VA  ++IVLT  K  +     +  T
Sbjct: 185 LITNNGTQSEMQSMVKVIDDYHIPIITITSTRDNPVAQASNIVLTYGK-TDENEMHMGAT 243

Query: 177 TSAIMQLAIGDAL 189
           TS   Q+   D L
Sbjct: 244 TSLFAQMFTIDIL 256


>gi|319943750|ref|ZP_08018031.1| CBS domain protein [Lautropia mirabilis ATCC 51599]
 gi|319742983|gb|EFV95389.1| CBS domain protein [Lautropia mirabilis ATCC 51599]
          Length = 168

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 54/116 (46%), Gaps = 13/116 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----------LN 281
           V     L DA+  + E   G VAV+ E  KL G++T  ++ R   +            + 
Sbjct: 23  VNPDMMLSDAVLTMDEHDIGSVAVM-ENGKLVGMLTFREVVRMLARRQLERRSGPTRPVA 81

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V DVM+ +P V+   T +    +++ + +   + V+DD    +GI+ F D+ R
Sbjct: 82  EIRVSDVMVSDPVVVTPSTEVNELRRVMVESHARYVPVMDD-GVLLGILSFHDVAR 136



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 26/43 (60%), Gaps = 1/43 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  D +L+ A+  + +H+I  + V+ +  K +G++ F +++R
Sbjct: 22  TVNPDMMLSDAVLTMDEHDIGSVAVM-ENGKLVGMLTFREVVR 63


>gi|332670799|ref|YP_004453807.1| putative signal transduction protein with CBS domains [Cellulomonas
           fimi ATCC 484]
 gi|332339837|gb|AEE46420.1| putative signal transduction protein with CBS domains [Cellulomonas
           fimi ATCC 484]
          Length = 138

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
                 +V++   L      ++ +  G + VV EG  + GI+T+ D+  R   + +    
Sbjct: 9   MTPHPTVVEVTDTLHAVAQTMATQDVGSL-VVAEGGAVVGIVTDRDLVVRGLAEGIGLDA 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V  +  +    +  D  L   ++L+R+  +  + VV +  +A+GI+   DL + 
Sbjct: 68  PVGQLASEELVTVGPDDDLAEVVRLMREKAVRRVPVV-EGDQAVGILSLGDLAQA 121



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +V ++M  +P V+     L    Q +   ++  L VV +    +GIV   DL+  G+
Sbjct: 4   TVSELMTPHPTVVEVTDTLHAVAQTMATQDVGSL-VVAEGGAVVGIVTDRDLVVRGL 59


>gi|315647751|ref|ZP_07900852.1| hypothetical protein PVOR_20609 [Paenibacillus vortex V453]
 gi|315276397|gb|EFU39740.1| hypothetical protein PVOR_20609 [Paenibacillus vortex V453]
          Length = 140

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
              ++ +      +  A  I+ +   G V V  EG+ + G+IT+ DI        KD+NT
Sbjct: 8   MSSNVKVCTPQDSVSTAAQIMRDINCGSVPVC-EGKNVVGMITDRDIVIKSVADSKDINT 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++ +  M  N      DT +    + + +H I  + +VD   + +G+V   DL +  I
Sbjct: 67  VTCQHCMTTNVVSASPDTDVHELSRTMAEHQIRRIPIVD-QGELVGMVAIGDLAKVNI 123



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M  N KV      ++ A Q++R  N   + V  + +  +G++   D++
Sbjct: 2   TTARDIMSSNVKVCTPQDSVSTAAQIMRDINCGSVPVC-EGKNVVGMITDRDIV 54


>gi|297583639|ref|YP_003699419.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus selenitireducens MLS10]
 gi|297142096|gb|ADH98853.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus selenitireducens MLS10]
          Length = 435

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E       VVD   KL GI+T  D+      +     VE +M + P  +   T +  A  
Sbjct: 218 ETGHSRYPVVDPELKLLGIVTAKDVI----GEEPDTQVEKIMTRQPIAVTSLTSVASAAH 273

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I +L V+D  +K IG++   D+L+ 
Sbjct: 274 MMVWEGIELLPVIDQGKKLIGVISRQDVLKA 304


>gi|294501520|ref|YP_003565220.1| hypothetical protein BMQ_4784 [Bacillus megaterium QM B1551]
 gi|295706868|ref|YP_003599943.1| hypothetical protein BMD_4770 [Bacillus megaterium DSM 319]
 gi|294351457|gb|ADE71786.1| conserved hypothetical protein [Bacillus megaterium QM B1551]
 gi|294804527|gb|ADF41593.1| conserved hypothetical protein [Bacillus megaterium DSM 319]
          Length = 438

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    V   D++        +++   +        +       VVD+  K+ G++T  
Sbjct: 182 QLIKKEIVLVEDILTPISEAVSLQLTDTIEKWHECNDKTHHSRFPVVDQHMKVHGMVTSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+      DL+T S+E VM KNP  +   T +  +  ++    I VL VVDD  +  GI+
Sbjct: 242 DV---IGYDLST-SIEKVMTKNPMTVHGKTSVASSAHMMVWEGIEVLPVVDDYHRLEGII 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|188996704|ref|YP_001930955.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
 gi|188931771|gb|ACD66401.1| putative signal-transduction protein with CBS domains
           [Sulfurihydrogenibium sp. YO3AOP1]
          Length = 156

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/108 (27%), Positives = 53/108 (49%), Gaps = 2/108 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVM 289
           P+V     L D I+ ++E   G V +V+     KGI+TE D+ + F  +++      +  
Sbjct: 14  PVVSFDLTLKDVISKMAEYNRGFVILVN-NGSPKGILTERDVNKLFSLNVSLNEPAINFA 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            KN      +  +   + L+ ++NI  L++V D  K +G V   D+LR
Sbjct: 73  NKNIVTAKPNISIYYGIDLMLENNIRRLVLVSDDGKYVGTVTVDDILR 120



 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 18/76 (23%), Positives = 30/76 (39%), Gaps = 2/76 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIK 291
           K    +   I ++ E     + +V +  K  G +T  DI R+   +     + V D+  K
Sbjct: 80  KPNISIYYGIDLMLENNIRRLVLVSDDGKYVGTVTVDDILRHLDDEALTRKIKVRDLKFK 139

Query: 292 NPKVILEDTLLTVAMQ 307
           N   I  D  L  A +
Sbjct: 140 NVITINSDATLYEASR 155


>gi|330835097|ref|YP_004409825.1| signal transduction protein [Metallosphaera cuprina Ar-4]
 gi|329567236|gb|AEB95341.1| signal transduction protein [Metallosphaera cuprina Ar-4]
          Length = 269

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
               +  ++    L  A+  L       + VV    ++ G++T  D+           + 
Sbjct: 135 MSSPVVTIEPSDKLGVAVERLVSSNLSRL-VVQTNGRVVGVVTTTDLLYVAPALKFKDSK 193

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V DVM  N  V+  +  +  A +L+    I  + +V+   K  GIV   D++R 
Sbjct: 194 IEVRDVMSPNVIVVDSNEDMANAARLMASRKIKGIPIVEKDGKLAGIVTTTDVVRA 249



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 53/139 (38%), Gaps = 2/139 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D                          +  V       DA  I+ +K+   +AV +
Sbjct: 44  ITQKDIVKFVHSMGEERSLEEVMLSEVMRKDVICVNPSIDPFDAAQIMIDKKQPLLAVCN 103

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           E +K  G+I + D+   +   +  L  V ++M      I     L VA++ L   N+S L
Sbjct: 104 EEEKAVGMIIKSDLSNFYASQVKGLQKVRELMSSPVVTIEPSDKLGVAVERLVSSNLSRL 163

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VV    + +G+V   DLL
Sbjct: 164 -VVQTNGRVVGVVTTTDLL 181



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 5/94 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----KDLNTLSVEDVMIKNPKVI 296
           A  +++ +      V+DE     GIIT+ DI +  H     + L  + + +VM K+   +
Sbjct: 19  ASKLMAVESIPKSIVIDENGSPIGIITQKDIVKFVHSMGEERSLEEVMLSEVMRKDVICV 78

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                   A Q++      +L V ++ +KA+G++
Sbjct: 79  NPSIDPFDAAQIMIDKKQPLLAVCNEEEKAVGMI 112



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 26/52 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              ++ +V     + +A  +++ ++   + +V++  KL GI+T  D+ R   
Sbjct: 200 MSPNVIVVDSNEDMANAARLMASRKIKGIPIVEKDGKLAGIVTTTDVVRALM 251


>gi|302526647|ref|ZP_07278989.1| signal-transduction protein [Streptomyces sp. AA4]
 gi|302435542|gb|EFL07358.1| signal-transduction protein [Streptomyces sp. AA4]
          Length = 139

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
              +   V+    + DA   ++ ++ G + V  E  +LKG++T+ DI        KD   
Sbjct: 8   MTPNAVCVRESDTVNDAARTMAREQLGALPVCGEDNRLKGMLTDRDIVVKVIAEGKDPRA 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   ++       I  D  +   +Q + QH +  L V+D     +G+V   D+ R 
Sbjct: 68  VHAGELAQGEAVTIGADDDVAEILQTMSQHRVRRLPVIDGHD-LVGVVAQADVARA 122



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 23/54 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M  N   + E   +  A + + +  +  L V  +  +  G++   D++
Sbjct: 2   TTARDLMTPNAVCVRESDTVNDAARTMAREQLGALPVCGEDNRLKGMLTDRDIV 55


>gi|169832345|ref|YP_001718327.1| CBS domain-containing protein [Candidatus Desulforudis audaxviator
           MP104C]
 gi|169639189|gb|ACA60695.1| CBS domain containing protein [Candidatus Desulforudis audaxviator
           MP104C]
          Length = 221

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 58/126 (46%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------ 272
               +   + +  P+  A+ I++ ++   + V  +G +L G++TE  +            
Sbjct: 17  CMTSNPITITLDTPIFQALDIMTRRKVRHLPVF-QGSRLVGLVTERGLLQVSPSPATTLS 75

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L  ++V++ ++K+P  +     +  A Q++RQ  I  L+V+ +  K +GIV  
Sbjct: 76  MHELNYVLAKVTVKEALVKDPVWVPPQMPIEEAAQVMRQKKIGSLLVM-EDGKLVGIVSQ 134

Query: 333 LDLLRF 338
            D++  
Sbjct: 135 TDIVEA 140



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+D M  NP  I  DT +  A+ ++ +  +  L V     + +G+V    LL+
Sbjct: 14  VQDCMTSNPITITLDTPIFQALDIMTRRKVRHLPVF-QGSRLVGLVTERGLLQ 65



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 40/105 (38%), Gaps = 9/105 (8%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             +           V    P+ +A  ++ +K+ G + V+ E  KL GI+++ DI     +
Sbjct: 85  KVTVKEALVKDPVWVPPQMPIEEAAQVMRQKKIGSLLVM-EDGKLVGIVSQTDIVEALVR 143

Query: 279 DLNTLSVEDVMIKNPKVILEDTL---LTVAMQLLRQHNISVLMVV 320
                       +   VI  +     L    Q  ++  I+++ VV
Sbjct: 144 LFGLHRAG---TR--LVIDTEDRVGVLADITQFFKERGINIISVV 183


>gi|171185094|ref|YP_001794013.1| signal-transduction protein [Thermoproteus neutrophilus V24Sta]
 gi|170934306|gb|ACB39567.1| putative signal-transduction protein with CBS domains
           [Thermoproteus neutrophilus V24Sta]
          Length = 141

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
               P+ +   +++E+R G V +V+ G   ++ G+++E DI R   + ++     E +  
Sbjct: 14  YPSTPIREVARLMAERRVGLVVLVEPGNPHRVVGVVSERDIVRAVAQGVSLEEPCEVIAT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   +     +  A +  R++ I   +VV    +  G++   D+LR 
Sbjct: 74  KNVVALDYRESVAKAAEAFRRYGIRH-VVVTREGRLYGVLSIRDILRE 120


>gi|326474212|gb|EGD98221.1| IMP dehydrogenase [Trichophyton tonsurans CBS 112818]
 gi|326477634|gb|EGE01644.1| inosine-5'-monophosphate dehydrogenase [Trichophyton equinum CBS
           127.97]
          Length = 551

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 56/267 (20%), Positives = 96/267 (35%), Gaps = 37/267 (13%)

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           AST+ S G  + FV  ++A           DL+     SG   ++K +L   +R      
Sbjct: 11  ASTVTSLGGRTEFVDCSKAL----------DLLKTEYTSGDGLDIKELLDSNKRG----- 55

Query: 143 AITSENKSVVA-----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           A+T  +  V+        +D+ L  P       +   P  S+ M      ++AI +    
Sbjct: 56  ALTYNDFLVLPGYIGFPASDVTLQSPVTKRISLN--VPLLSSPMDTVTEHSMAIHMALLG 113

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGC 253
                   V+H              V            ++     + +   +  +  FG 
Sbjct: 114 GLG-----VIHHNCSAEEQAEMVRKVKRYENGFILDPVVISPKTTVAEVKELKQKWGFGG 168

Query: 254 VAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             V + G    KL GI+T  DI   FH +L+   V  VM  +       T L  A ++LR
Sbjct: 169 FPVTENGDLRSKLVGIVTSRDI--QFHPELSD-PVTAVMTTDLVTAPSGTTLAEANEVLR 225

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 L +VD+    + ++   DL++
Sbjct: 226 ASKKGKLPIVDEAGNIVSLLSRSDLMK 252


>gi|297204318|ref|ZP_06921715.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
 gi|297148641|gb|EFH29057.1| oxidoreductase [Streptomyces sviceus ATCC 29083]
          Length = 143

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 54/124 (43%), Gaps = 5/124 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +          +   V+    +     I+ ++  G V V D G +L+G++T+ D+ 
Sbjct: 1   MRYVMTQHVSDIMTSAPVTVEPQTSVTAVARIMRDQDLGAVLVTD-GDELRGLVTDRDLV 59

Query: 274 -RNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R+  +  D   ++V      +   +  +  L  A++L+R+H +  + VVD    A+GIV
Sbjct: 60  VRSLAEGGDPEQITVAGACSDDLLTVTPEDDLDHAIELMREHAVRRIPVVDH-GHAVGIV 118

Query: 331 HFLD 334
              D
Sbjct: 119 SLGD 122



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + + T  V D+M   P  +   T +T   +++R  ++  ++V D  +   G+V   DL+
Sbjct: 1   MRYVMTQHVSDIMTSAPVTVEPQTSVTAVARIMRDQDLGAVLVTDGDE-LRGLVTDRDLV 59


>gi|284033114|ref|YP_003383045.1| putative signal transduction protein with CBS domains [Kribbella
           flavida DSM 17836]
 gi|283812407|gb|ADB34246.1| putative signal transduction protein with CBS domains [Kribbella
           flavida DSM 17836]
          Length = 141

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 51/117 (43%), Gaps = 3/117 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
            G+ +  +     + + + +L+E   G + V  +G  + GI++E D+ R  +   D   +
Sbjct: 10  KGNQVVTISPEATVTELLALLAEHNVGALVVSPDGTSVAGIVSERDVVRLLNSTPDAGEV 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            V  +M         D L+   M+L+ +  I  + VV       GIV   D+++  I
Sbjct: 70  RVSAIMTSQVHTCGPDDLIDNLMRLMTEQRIRHVPVV-VDGALTGIVSIGDVVKSRI 125


>gi|160943603|ref|ZP_02090835.1| hypothetical protein FAEPRAM212_01095 [Faecalibacterium prausnitzii
           M21/2]
 gi|158445058|gb|EDP22061.1| hypothetical protein FAEPRAM212_01095 [Faecalibacterium prausnitzii
           M21/2]
          Length = 321

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    VE I   +  ++  GIG S  +             P      + +        T
Sbjct: 153 DELEQCVELIANARTVLLF-GIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNAT 211

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ IV S+SG + E+   +   +    P+IA+T    S VA  AD VL +        
Sbjct: 212 AQDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFR 271

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
           +G    +S + QL + D L  A     +
Sbjct: 272 NGA--MSSRLSQLNVVDILYTAYASRNH 297


>gi|16081707|ref|NP_394084.1| inosine-5'-monophosphate dehydrogenase related protein
           [Thermoplasma acidophilum DSM 1728]
 gi|10639778|emb|CAC11750.1| inosine-5'-monophosphate dehydrogenase related protein
           [Thermoplasma acidophilum]
          Length = 145

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
                  +A  I+++   G  A++ E  ++KG++TE D         +D   + ++++M 
Sbjct: 22  PGDTSAYEAAKIMAQDHVG-FAIIAENGEIKGMVTEWDYINKIIAQDRDPKKVRIDEIMN 80

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                I  DT      +++ ++ I  L V+    K +G++   D+LR 
Sbjct: 81  SPIISIDPDTPTFKVTEIMAKNGIRRLPVM-KNGKLLGVITSRDILRI 127



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 15/73 (20%), Positives = 29/73 (39%), Gaps = 3/73 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      I  +    P      I+++     + V+ +  KL G+IT  DI R F  
Sbjct: 72  KVRIDEIMNSPIISIDPDTPTFKVTEIMAKNGIRRLPVM-KNGKLLGVITSRDILRIFKD 130

Query: 279 DLNTLSVEDVMIK 291
            ++  S+ D++ +
Sbjct: 131 YMD--SISDIISR 141


>gi|145351771|ref|XP_001420237.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144580471|gb|ABO98530.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 133

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 19/123 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED----- 287
           V+    + +A+ +L + R   V VV+   ++ G+++E D+     K   T SV D     
Sbjct: 12  VRPDESVFEAMKLLVDNRISAVPVVNASGEVLGVVSEYDLMARVGKKETTKSVADDGMFP 71

Query: 288 -------------VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                         M +       D  L  A +L+   N++ + VVDD    +GI+   D
Sbjct: 72  RRMYKASGSKVSTAMHEA-TTCTPDMPLVEATELMLNGNLARMPVVDDRGALVGILSRGD 130

Query: 335 LLR 337
           ++R
Sbjct: 131 IMR 133



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 26/52 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  VM      +  D  +  AM+LL  + IS + VV+   + +G+V   DL+
Sbjct: 1   VRSVMTSRVLTVRPDESVFEAMKLLVDNRISAVPVVNASGEVLGVVSEYDLM 52



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           S V  +           PL++A  ++       + VVD+   L GI++ GDI R
Sbjct: 80  SKVSTAMHEATTCTPDMPLVEATELMLNGNLARMPVVDDRGALVGILSRGDIMR 133


>gi|308274761|emb|CBX31360.1| hypothetical protein N47_E48720 [uncultured Desulfobacterium sp.]
          Length = 170

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/139 (28%), Positives = 55/139 (39%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
               +  V     +I A  IL E     V VVD+  KL GI+ + DI             
Sbjct: 25  MKTDVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILCQSDIISQQKKFPVPSLF 84

Query: 273 -----------FRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       ++  K++  +   +VE  M  NP  +  DT +     L+  +N   L 
Sbjct: 85  AFLDGFISIPSMKHIEKEVQKIAAVTVEHAMSVNPVTVKSDTSIEAVAALMVDNNFHTLP 144

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVDD  K IGIV   D+LR
Sbjct: 145 VVDD-GKLIGIVGKEDILR 162



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 34/65 (52%), Gaps = 5/65 (7%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R        L V+D+M  +   ++ +T +  A ++L +++I+ + VVD   K  GI+ 
Sbjct: 13  LRRKIM-----LIVKDIMKTDVITVMPETEVIQAAKILLENHINGVPVVDKNGKLAGILC 67

Query: 332 FLDLL 336
             D++
Sbjct: 68  QSDII 72


>gi|291444191|ref|ZP_06583581.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
 gi|291347138|gb|EFE74042.1| CBS domain-containing protein [Streptomyces roseosporus NRRL 15998]
          Length = 151

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 51/129 (39%), Gaps = 6/129 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGD 271
                  +           +     L  A  ++ E   G + V  +G   ++ GIIT+ D
Sbjct: 6   RRKSPMTTAKDIMHSGARWIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDRD 65

Query: 272 IFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           I         D + ++  D+    P+ I  +  +   ++ ++ H I  L VV + +K +G
Sbjct: 66  IVVGCVAKGHDPSKVTAGDLAQGTPRWIEAEADVDAVLEEMQTHRIRRLPVV-ENKKLVG 124

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 125 MISEADLAQ 133


>gi|119873087|ref|YP_931094.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119674495|gb|ABL88751.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 141

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 20/107 (18%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
               + +   ++++++ G V +VD     ++ G+++E DI R    +++  +  E +  K
Sbjct: 15  PSTSIREVAKLMAQRKVGLVVLVDPSDPYRVVGVVSERDIVRAVAHEIDLDMPCETIASK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   +  +  +  A +   ++ I  L VV    +  G+    DL++ 
Sbjct: 75  NVISLEANENVAKAAEAFVKYGIRHL-VVTKDGRLYGVFSIRDLIKE 120


>gi|54298493|ref|YP_124862.1| hypothetical protein lpp2557 [Legionella pneumophila str. Paris]
 gi|53752278|emb|CAH13710.1| hypothetical protein lpp2557 [Legionella pneumophila str. Paris]
          Length = 149

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 51/109 (46%), Gaps = 6/109 (5%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
              +  A  ++     G + +V+E    +   GI+T+ D+         +   L+V+D++
Sbjct: 17  DESVKQAAELMRTHHVGDIVLVEEFKGHRVPIGIVTDRDLVVEVMALDVNPEGLAVQDIV 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++  V  E+  L  +++ +++  +  L VVD+  + +GI+   D+   
Sbjct: 77  TRSVLVAREEDSLIDSLEFMKEKGVRRLPVVDNDHELVGIITIDDITEL 125



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 25/51 (49%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           + +    LID++  + EK    + VVD   +L GIIT  DI     + L+ 
Sbjct: 82  VAREEDSLIDSLEFMKEKGVRRLPVVDNDHELVGIITIDDITELLAEMLHK 132


>gi|325830428|ref|ZP_08163885.1| inosine 5-monophosphate dehydrogenase [Eggerthella sp. HGA1]
 gi|325487895|gb|EGC90333.1| inosine 5-monophosphate dehydrogenase [Eggerthella sp. HGA1]
          Length = 510

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +AIAL       F      +      +  +    +  + S  ++
Sbjct: 55  NIPMVSAIMQAVSDDGMAIALATEGGLSFVYGSQTIEDQAAMVARVKDYKAGFVTSDANL 114

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
                   L D + +  E     + V  +G    KL G++T+ D      +      V D
Sbjct: 115 ---SPEMTLADVVALKEEHGHSTMPVTADGSAHGKLVGVVTDRDYR--LSRMSMDAKVAD 169

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M    K+I    DT L VA  ++  + ++ L VVDD    
Sbjct: 170 FMTPREKMIVAPADTSLKVANDIIWDNKLNSLPVVDDDDCL 210


>gi|239835159|ref|ZP_04683486.1| RpiR family transcriptional regulator [Ochrobactrum intermedium LMG
           3301]
 gi|239821298|gb|EEQ92868.1| RpiR family transcriptional regulator [Ochrobactrum intermedium LMG
           3301]
          Length = 282

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 67/159 (42%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S++ ++          A++ + + + R+ + G+G S  +    +  L   G       
Sbjct: 107 LQSMQRTVSANSEQDIDDALQALISAR-RIHLAGVGASSLVARDFSYKLMKLGRNVMHDS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     ++  +   D++  LS+SG+S E   I   AR+    +IA+T  N++ +   AD
Sbjct: 166 DSHIQMANVSTLHEGDVLFALSYSGTSIETLRISEEARKCGATVIAVTGLNRNPLNEIAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           I L      +      +  T+   QL + D L I L + 
Sbjct: 226 IPLYT--VADEERVRSSSITARDAQLILTDLLFILLFQR 262


>gi|228919571|ref|ZP_04082933.1| CBS domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
 gi|228839925|gb|EEM85204.1| CBS domain protein [Bacillus thuringiensis serovar huazhongensis
           BGSC 4BD1]
          Length = 112

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+  G + VV E +++ G++T+ D+       K   +  + +VM  N   +  +  + 
Sbjct: 1   MKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIE 59

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A +L+ QH I  L VVD   + IG++   DL
Sbjct: 60  KATELMAQHQIRRLPVVD-SGQLIGMLALGDL 90


>gi|257790179|ref|YP_003180785.1| inosine 5-monophosphate dehydrogenase [Eggerthella lenta DSM 2243]
 gi|317489644|ref|ZP_07948148.1| IMP dehydrogenase/GMP reductase domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
 gi|257474076|gb|ACV54396.1| IMP dehydrogenase [Eggerthella lenta DSM 2243]
 gi|316911238|gb|EFV32843.1| IMP dehydrogenase/GMP reductase domain-containing protein
           [Eggerthella sp. 1_3_56FAA]
          Length = 506

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 60/161 (37%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +AIAL       F      +      +  +    +  + S  ++
Sbjct: 51  NIPMVSAIMQAVSDDGMAIALATEGGLSFVYGSQTIEDQAAMVARVKDYKAGFVTSDANL 110

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
                   L D + +  E     + V  +G    KL G++T+ D      +      V D
Sbjct: 111 ---SPEMTLADVVALKEEHGHSTMPVTADGSAHGKLVGVVTDRDYR--LSRMSMDAKVAD 165

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M    K+I    DT L VA  ++  + ++ L VVDD    
Sbjct: 166 FMTPREKMIVAPADTSLKVANDIIWDNKLNSLPVVDDDDCL 206


>gi|92114860|ref|YP_574788.1| DNA-binding transcriptional regulator HexR [Chromohalobacter
           salexigens DSM 3043]
 gi|91797950|gb|ABE60089.1| transcriptional regulator, RpiR family [Chromohalobacter salexigens
           DSM 3043]
          Length = 286

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 67/167 (40%), Gaps = 7/167 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L+ + +   + +   AV+ +   K ++   G+G SG +             P     
Sbjct: 106 IAALDDARRALDAKRVERAVDYLIQAK-QISFFGLGASGPVAQDAQHKFFRFNLPVTAYE 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D+I+++S++G + EL  I   AR     ++ IT+   S +A    
Sbjct: 165 DVLMQRMVAAATHTGDVIVIVSYTGRTRELVEIARVARDNGAIVLGITA-PDSPLAHECT 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
             L +    ++  +   P TS ++ LA+ D LA  +   R     DF
Sbjct: 224 ETLEVITPEDTDVY--MPMTSRMIHLALIDVLATGVTLRRG---EDF 265


>gi|294628134|ref|ZP_06706694.1| CBS domain-containing protein [Streptomyces sp. e14]
 gi|292831467|gb|EFF89816.1| CBS domain-containing protein [Streptomyces sp. e14]
          Length = 145

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 59/127 (46%), Gaps = 7/127 (5%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K G +     D+M S      V+    +      + ++  G V V  EG +L+G++++ D
Sbjct: 3   KGGVMAQHVRDIMTSRLVT--VEPQTSVTAVAQKMRDEDIGIVLVT-EGDELRGLVSDRD 59

Query: 272 IF-RNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  R+  +  D    +V      +   I  D  +  A++L+R+H++  + VVD    A+G
Sbjct: 60  LVVRSLAEGGDQEQRTVASACSGDIVTITPDEDVDQAVRLMREHSVRRVPVVDH-GHAVG 118

Query: 329 IVHFLDL 335
           I+   DL
Sbjct: 119 ILSIGDL 125


>gi|147919877|ref|YP_686372.1| hypothetical protein RCIX1868 [uncultured methanogenic archaeon
           RC-I]
 gi|110621768|emb|CAJ37046.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 259

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 53/117 (45%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDLN 281
                +     ++ E+    V ++D G  L G+++E D+   F              ++ 
Sbjct: 143 PPDARVSHIRRLMMEQGVSRVPIMD-GATLVGMVSETDVAAAFRGVKRRSAQNHEDNNVE 201

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   D++  N   +  +T +  A +++ +++I  L V+DD ++ +GI+   D++R 
Sbjct: 202 RMIAMDILRVNVITVSPETDIREAARIMLENDIGALPVLDDRRRLVGIITRRDIVRA 258



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 64/202 (31%), Gaps = 29/202 (14%)

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P    HAA+A      +++ DD            EL+  +   +     ++A TS   S+
Sbjct: 70  PPSLFHAADALSNSFALLSPDD------------ELEKAIQALKEVDAVVVADTSIRGSI 117

Query: 152 --------VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI---ALLESRNFS 200
                   VA    +   +     + P         +M       + I   A L      
Sbjct: 118 STSDILRHVAPSGPVASLMKTPITAPPDARVSHIRRLMMEQGVSRVPIMDGATLVGMVSE 177

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL------VKIGCPLIDAITILSEKRFGCV 254
            +         +        ++V        L      V     + +A  I+ E   G +
Sbjct: 178 TDVAAAFRGVKRRSAQNHEDNNVERMIAMDILRVNVITVSPETDIREAARIMLENDIGAL 237

Query: 255 AVVDEGQKLKGIITEGDIFRNF 276
            V+D+ ++L GIIT  DI R  
Sbjct: 238 PVLDDRRRLVGIITRRDIVRAI 259



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           L  + ++DVM K P +I +   +T A+ ++ +H++  L+V     + +GI+   
Sbjct: 4   LTLMKLKDVMSK-PLIIDKSDRITEALDMMDKHHVRRLIV-RHSGQVMGIISIR 55


>gi|322389752|ref|ZP_08063299.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
 gi|321143591|gb|EFX39022.1| CBS domain protein [Streptococcus parasanguinis ATCC 903]
          Length = 212

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/116 (29%), Positives = 50/116 (43%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKD 279
            +V     S  LV     + DAI  L       + V+DEG+ L GI++  D+ R   +  
Sbjct: 75  KEVAEIMTSPVLVTHDSYIQDAIITLFMYDADVLYVIDEGKLLLGIMSRKDLLRASLNSS 134

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           + T  V   M + P      +D  +  A  LL+ H I  L VVD+    K +G V 
Sbjct: 135 IQTTPVAVCMTRMPHIITCTKDMNILEAAALLQDHAIDSLPVVDEENDRKIVGTVT 190



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFQKEVAEIMT-SPVLVTHDSYIQDAIITLFMYDADVLYVIDEGKLLLGIM 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|238926489|ref|ZP_04658249.1| RpiR family transcriptional regulator [Selenomonas flueggei ATCC
           43531]
 gi|238885683|gb|EEQ49321.1| RpiR family transcriptional regulator [Selenomonas flueggei ATCC
           43531]
          Length = 282

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 73/178 (41%), Gaps = 7/178 (3%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
              ++ +    +    E   +++L  +L+           ++I+     + + G G S  
Sbjct: 89  EQHDTALTICQKIFNTE---IATLHETLEMLNVEHLQTMAQRIREAD-YIEVFGSGGSSV 144

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
           +   +       G     +  A+       ++ + D+ I +S +GS+  +   L  AR+ 
Sbjct: 145 VAQDIRHKFLKVGIRCTVLLDADIQAMSASLLKKGDVAIGISHTGSTKSVFHCLKMARKN 204

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA-LAIALL 194
              +I +T++ KS +   AD  L +P   +        T++ I +L + DA LA+A+ 
Sbjct: 205 GAYVILLTTQAKSPIGRIAD--LVIPVGSKETLFKSESTSARIAELVVMDAVLALAVS 260


>gi|254440558|ref|ZP_05054052.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
 gi|198256004|gb|EDY80318.1| hypothetical protein OA307_5428 [Octadecabacter antarcticus 307]
          Length = 145

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 5/109 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKD---LNTLSVEDVMIK 291
              + DA  I+SEKR G V + D+G     GI++E DI R   K       L V D+M K
Sbjct: 21  DANVADAARIMSEKRIGAVVISDDGGATPAGILSERDIVRELGKQGPSCMALVVSDMMTK 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                         +  + Q     + V+D   K +G++   D ++  +
Sbjct: 81  KLVTCSPSDTTDSVLVKMTQGRFRHMPVMD-GGKMVGLISIGDAVKARL 128



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 21/51 (41%), Gaps = 1/51 (1%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLLRF 338
                  +  D  +  A +++ +  I  +++ DD      GI+   D++R 
Sbjct: 11  ATGGVLTLTSDANVADAARIMSEKRIGAVVISDDGGATPAGILSERDIVRE 61


>gi|294494706|ref|YP_003541199.1| hypothetical protein Mmah_0016 [Methanohalophilus mahii DSM 5219]
 gi|292665705|gb|ADE35554.1| CBS domain containing membrane protein [Methanohalophilus mahii DSM
           5219]
          Length = 322

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 64/184 (34%), Gaps = 1/184 (0%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A     ++ + K+         P  +A      G   ++ +++     E   +V      
Sbjct: 58  ANPTTPIIDVIKKMSKMHFKHMPIVNAGTSKLEGIITSVDIMDLLGGGERSLFVEKKFKG 117

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                + A         +  ++    +  A  ++ +K+ GC+ VVD    L+ I TE D 
Sbjct: 118 NLLSAINAQVRYIMEHEVHSLRNDAHIEKAFELMIDKQIGCIPVVDNDGHLEAICTERDF 177

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L    VE    +N K     T +    + + ++    + +V      +G+V  
Sbjct: 178 LTFIRGVLTGKKVEKWQTRNVKTADAATSIWDVARTMIENKFKRVPIV-RDNILVGVVTS 236

Query: 333 LDLL 336
            D+L
Sbjct: 237 SDIL 240



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 27/150 (18%), Positives = 52/150 (34%), Gaps = 20/150 (13%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF     G   G              ++        + D    + E +F  V +V +
Sbjct: 173 TERDFLTFIRGVLTGK---KVEKW--QTRNVKTADAATSIWDVARTMIENKFKRVPIVRD 227

Query: 260 GQKLKGIITEGDIF------RNFHK-------DLNTLSVEDVMIKNPKVILEDTLLTVAM 306
              L G++T  DI         F K       +     +  ++  +    + D  L  A 
Sbjct: 228 N-ILVGVVTSSDILSYLGTGEAFEKLTTGNVHEAFDSPISSLLHNDLIWTIPDADLGEAA 286

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++ + +I  L ++ D     GI+   D+L
Sbjct: 287 EIMLEKSIGCLPIIKDGN-LEGILTERDIL 315



 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 19/78 (24%), Positives = 32/78 (41%), Gaps = 3/78 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +   F  L  G          S ++H+     +      L +A  I+ EK  GC+ ++ +
Sbjct: 245 TGEAFEKLTTGNVHEAFDSPISSLLHNDLIWTI--PDADLGEAAEIMLEKSIGCLPII-K 301

Query: 260 GQKLKGIITEGDIFRNFH 277
              L+GI+TE DI     
Sbjct: 302 DGNLEGILTERDILLALA 319


>gi|251789846|ref|YP_003004567.1| DNA-binding transcriptional regulator HexR [Dickeya zeae Ech1591]
 gi|247538467|gb|ACT07088.1| transcriptional regulator, RpiR family [Dickeya zeae Ech1591]
          Length = 289

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 77/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +   GL  ++SSL  +     + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVEEDDSVESYTSKIFESTMAGLEHVKSSLDIQ---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   + ++   G G S  +     +       P  +                 D+++++S
Sbjct: 125 LTQAR-KISFFGFGASAAVAHDAMNKFFRFNIPVVYFDDLVMQRMSCMNSGDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IAITS+  S ++  A + L +    ++  +   P  S 
Sbjct: 184 HTGRTKSLVDMARLARENDATVIAITSDG-SPLSREASLTLRVEVPEDTDVY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           I QL + D LA      R     D
Sbjct: 241 IAQLTLIDVLATGFTLRRGAKFRD 264


>gi|330938573|gb|EGH42147.1| cyclic nucleotide-binding/CBS:putative nucleotidyltransferase
           [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 644

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
           +     +     P+ DA+ ++ E++ G + +VDE Q   G  T  D+           + 
Sbjct: 183 AMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGGFTLRDLREAVADVNADFSA 242

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   M  +P  +  D     A   +   +I+ + +V    +  G+V   DL
Sbjct: 243 PVRHTMSLSPFHLSPDASAFDAAIAMTGRHIAHVCLV-RDGRLCGVVSERDL 293



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + ++ +++P +   +T +  A++L+ +  +  +++VD+ Q  +G     DL   
Sbjct: 176 NTRLGELAMRHPVMCSPETPMRDAVRLMHEQQVGSIVIVDERQSPLGGFTLRDLREA 232


>gi|271966184|ref|YP_003340380.1| hypothetical protein Sros_4814 [Streptosporangium roseum DSM 43021]
 gi|270509359|gb|ACZ87637.1| CBS domain containing membrane protein [Streptosporangium roseum
           DSM 43021]
          Length = 226

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 42/128 (32%), Gaps = 23/128 (17%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHK-------- 278
           V       D   +L       V V+D    + G+++E D+       + FH         
Sbjct: 16  VGEDACFKDIAELLITHAVSAVPVLDSDGHVTGVVSEADLLHKEEGRKRFHGASCPPPQT 75

Query: 279 ---------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                            ++M      +  D  +  A +L+  H +  L V+D      GI
Sbjct: 76  GPDQGPEAGKARGKVARELMTAPAVTVSMDVPVAAAGRLMEHHGVKRLPVLDGHGHLAGI 135

Query: 330 VHFLDLLR 337
           V   DLL+
Sbjct: 136 VSRHDLLK 143



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM +    + ED       +LL  H +S + V+D      G+V   DLL
Sbjct: 5   VKDVMTRRVISVGEDACFKDIAELLITHAVSAVPVLDSDGHVTGVVSEADLL 56



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 29/70 (41%), Gaps = 1/70 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G + G      +  + +  ++  V +  P+  A  ++       + V+D    L GI++
Sbjct: 79  QGPEAGKARGKVARELMTAPAVT-VSMDVPVAAAGRLMEHHGVKRLPVLDGHGHLAGIVS 137

Query: 269 EGDIFRNFHK 278
             D+ + F +
Sbjct: 138 RHDLLKVFAR 147


>gi|158336590|ref|YP_001517764.1| signal transduction protein [Acaryochloris marina MBIC11017]
 gi|158306831|gb|ABW28448.1| signal transduction protein containing an EAL domain, a PAS domain,
           a CBS domain pair and a GGDEF domain [Acaryochloris
           marina MBIC11017]
          Length = 1405

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 14/119 (11%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFG----------CVAVVDEGQKLKGIITEGDIFR-- 274
                +V     L + + ++S  R G             +V   QKL GI+TE DI +  
Sbjct: 24  ERHPLVVTPQASLKEVVLLMSLGREGKANAARPQRSSYVLVQHQQKLVGILTERDIVKLS 83

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               D + +S  +VM      +LE  L  +   + LL+ H+I  L V++D    IG++ 
Sbjct: 84  TTTTDFSQVSASEVMSTELYTLLETELQDILTPLTLLQTHHIRHLPVLNDTGGLIGVIT 142



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/114 (17%), Positives = 43/114 (37%), Gaps = 10/114 (8%)

Query: 235 IGCPLIDAITILS---EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVM 289
           +   L D +T L+         + V+++   L G+IT   + +       L    V +VM
Sbjct: 106 LETELQDILTPLTLLQTHHIRHLPVLNDTGGLIGVITTESLRKVLEPTMLLKLRHVSEVM 165

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-----KAIGIVHFLDLLRF 338
                       +    Q +  H +S +++          + +GI+   D+++F
Sbjct: 166 TPTVVTAPPSDTIQQLAQRMAMHQMSCVVIAQQQSQTSGVQPLGIITERDIVKF 219



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 41/112 (36%), Gaps = 7/112 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFR--NFHKDLNTLSVE 286
                +      ++  +  CV +  +  +       GIITE DI +      DL T   E
Sbjct: 173 PPSDTIQQLAQRMAMHQMSCVVIAQQQSQTSGVQPLGIITERDIVKFQALSLDLQTTLAE 232

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM +    +  D  L  A Q ++   +  L+V+       GI+    +L  
Sbjct: 233 TVMSQPLVCLNLDDKLWDAHQTMQDMQVRRLVVMGQQGDLAGILTQASILDA 284


>gi|307328540|ref|ZP_07607714.1| putative signal transduction protein with CBS domains [Streptomyces
           violaceusniger Tu 4113]
 gi|306885808|gb|EFN16820.1| putative signal transduction protein with CBS domains [Streptomyces
           violaceusniger Tu 4113]
          Length = 132

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE DI  +    +D +  +  D   
Sbjct: 16  IGPAHTLRQAARLMSARRVGSAIVLDPDTCGLGILTERDILNSVGAGQDPDQETAHDHTT 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + + Q     L+V+D     +G+V   D++R
Sbjct: 76  ADVVFAAPGWTLDEAARTMTQGGFRHLVVLDADG-PVGVVSVRDIIR 121



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D     +GI+   D+L
Sbjct: 5   VRDAMSSVVLTIGPAHTLRQAARLMSARRVGSAIVLDPDTCGLGILTERDIL 56


>gi|297617278|ref|YP_003702437.1| hypothetical protein Slip_1094 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297145115|gb|ADI01872.1| CBS domain containing protein [Syntrophothermus lipocalidus DSM
           12680]
          Length = 451

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/153 (18%), Positives = 55/153 (35%), Gaps = 19/153 (12%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           DF+ L P   +  +     D++        V     L +A  ++       + VVD   +
Sbjct: 52  DFFALEPPELVTDVGTKVEDLLEDEAVFS-VPPETTLREAGRLIRVHNIKTLPVVDSKAR 110

Query: 263 LKGIITEGDIFRNFHKDLNT-----------------LSVEDVM-IKNPKVILEDTLLTV 304
           L G++T GD+ + +   L                     V ++M  +N  +  +   +  
Sbjct: 111 LLGLLTVGDVAQIYLDRLGQEEEDPQKVVSVLSSVLSTKVSEIMKTQNLVLFEKSETVEE 170

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           A + +         VVD+  +  GI+    LL+
Sbjct: 171 AKKQMLATRYRNYPVVDEENRLAGIISRHHLLQ 203


>gi|294338972|emb|CAZ87316.1| putative Glutamine--scyllo-inositol transaminase [Thiomonas sp.
           3As]
          Length = 502

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 40/108 (37%), Gaps = 11/108 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------HKDLNTLSVED 287
             G  L +A+  L     G + V DE  +L   +T+GD+ R           L+ L    
Sbjct: 12  PPGATLHEALARLDATAQGILLVTDEQGRLLRTVTDGDLRRAALAGVSNEAPLSALPA-- 69

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                P  +         + L+    I  + VVD   +A+ +V   +L
Sbjct: 70  ---HPPHTVGLQASQRDVLALMDAQRIDHVPVVDAAGRAVDLVTRREL 114


>gi|22136010|gb|AAM91587.1| putative protein [Arabidopsis thaliana]
 gi|23197824|gb|AAN15439.1| putative protein [Arabidopsis thaliana]
          Length = 469

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 45/95 (47%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTLL 302
           ++ +R     + D    L GI+T+ D+  R   + L  +   V  VM +NP  +  D+L 
Sbjct: 1   MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEGLRPDQTLVSKVMTRNPIFVTSDSLA 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             A+Q + Q     L VV++ +    ++  LD+ +
Sbjct: 61  LEALQKMVQGKFRHLPVVENGE----VIALLDITK 91



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD 279
           S ++     + LV    P+  A   + + R   V ++  G K+ GI+T  D + R   ++
Sbjct: 145 STIITDNSKVALVAPSDPVSVAAKRMRDLRVNSV-IISTGNKISGILTSKDILMRVVAQN 203

Query: 280 LN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           L+     VE VM  NP+    +T +  A+  +       L ++D   
Sbjct: 204 LSPELTLVEKVMTPNPECASLETTILDALHTMHDGKFLHLPIIDKDG 250


>gi|17230612|ref|NP_487160.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
 gi|17132215|dbj|BAB74819.1| two-component hybrid sensor and regulator [Nostoc sp. PCC 7120]
          Length = 1286

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 30/139 (21%)

Query: 232 LVKIGCPLIDAITILS----------------EKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           ++K    ++DAI  +S                E R  CV +V    +L GI TE D+ + 
Sbjct: 35  IIKPETTVMDAIAQMSGVRVMCDTAKLDEVHLEARSSCVLIV-AAGRLLGIFTERDVVKL 93

Query: 276 FH--KDLNTLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               + L  L++ +VMI     + E   T L  A+ LL+Q+ I  + ++D+ ++ +G++ 
Sbjct: 94  CSQRRCLENLAIREVMIHPVVTLRESEFTDLFFAVNLLQQYRIRHIPILDEQERVVGLLT 153

Query: 332 ----FL-----DLLRFGII 341
                      DLLR  ++
Sbjct: 154 NESLRHTSRSVDLLRLRLV 172



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 44/113 (38%), Gaps = 9/113 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD-------EGQKLKGIITEGDIFR--NFHKDLNTLSV 285
               ++     ++E R   V +V          +   GI+TE DI +      +L T  V
Sbjct: 185 PDSSMLAIAQQMTENRVSSVMIVQLGQFQDKPQEIPVGIVTERDIVQFQALGLNLETCQV 244

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VM      +  D  L    Q++ Q  I  L V  D  + +GIV    LL+ 
Sbjct: 245 QTVMSSPIFAVRPDDSLRFVQQIMEQRLIRRLAVTGDQGELLGIVTQSSLLQA 297



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 27/149 (18%), Positives = 61/149 (40%), Gaps = 15/149 (10%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG----CPLIDAITILSEKRFGCVAVVDE 259
           F                +  +      P+V +       L  A+ +L + R   + ++DE
Sbjct: 85  FTERDVVKLCSQRRCLENLAIREVMIHPVVTLRESEFTDLFFAVNLLQQYRIRHIPILDE 144

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
            +++ G++T   + R+  + ++ L    V +VM         D+ +    Q + ++ +S 
Sbjct: 145 QERVVGLLTNESL-RHTSRSVDLLRLRLVSEVMTCEVICATPDSSMLAIAQQMTENRVSS 203

Query: 317 LMVV------DD-CQKAIGIVHFLDLLRF 338
           +M+V      D   +  +GIV   D+++F
Sbjct: 204 VMIVQLGQFQDKPQEIPVGIVTERDIVQF 232


>gi|325577769|ref|ZP_08148044.1| RpiR family transcriptional regulator [Haemophilus parainfluenzae
           ATCC 33392]
 gi|325160514|gb|EGC72640.1| RpiR family transcriptional regulator [Haemophilus parainfluenzae
           ATCC 33392]
          Length = 288

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 40  SLESSLQGELSF-----QFHCAVEKIKAIK--GRVVITGIGKSGHIGSKLASTLASTGTP 92
            L+S++   +        F    E +KAI+   RV + G+G SG       + L   G  
Sbjct: 105 KLKSAINNVMDETINLLDFKQLEETVKAIQQANRVFLFGVGTSGITAEDAKNKLMRIGVQ 164

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                     +    ++T+ D+ I LS SG S E    +  A+      IAIT   +S +
Sbjct: 165 VDATGNNHFMYMQASLLTKKDVAIGLSHSGYSQETTHTMKIAKENGAKTIAITHSLRSPI 224

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +AD+VL    +            + I QL + D +   L+++
Sbjct: 225 TEYADLVLVNGNKQGKLQGDSI--GTKIAQLFVLDLIYALLVQA 266


>gi|313497387|gb|ADR58753.1| DNA-binding transcriptional regulator HexR [Pseudomonas putida
           BIRD-1]
          Length = 290

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDSACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVDVARLARENGASVLGLTA-AGSPLAN 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|300312600|ref|YP_003776692.1| CBS domain-containing protein [Herbaspirillum seropedicae SmR1]
 gi|124483446|emb|CAM32596.1| FOG: CBS domain containing protein [Herbaspirillum seropedicae]
 gi|300075385|gb|ADJ64784.1| CBS domain containing protein [Herbaspirillum seropedicae SmR1]
          Length = 153

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           V    P+ +A+  ++EK  G + VV E   L G++T  ++    HK+   L   +V   M
Sbjct: 17  VTPDTPIQEAVAAMAEKDIGSL-VVMEYGDLVGMLTFREVLLTLHKNGGELGGSTVRKHM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              P  +  DT L    +++ + +   + V+ + +  +G++ F D+ + 
Sbjct: 76  NDAPITVTPDTDLNEVRRIMLEKHARYVPVM-EARTVLGVMSFYDVAKA 123



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT +  A+  + + +I  L+V+ +    +G++ F ++L
Sbjct: 16  TVTPDTPIQEAVAAMAEKDIGSLVVM-EYGDLVGMLTFREVL 56


>gi|86748495|ref|YP_484991.1| CBS domain-containing protein [Rhodopseudomonas palustris HaA2]
 gi|86571523|gb|ABD06080.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           HaA2]
          Length = 171

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 51/124 (41%), Gaps = 11/124 (8%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           H   S+  V     + +         +    V+ EG +  G++T+ D    F        
Sbjct: 40  HMTRSVKPVTREMTMRELEDQFERDDYNAYPVL-EGSRAIGLVTKYDFLNCFAFHPTQML 98

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               DL   +V D+M  +   +  DT LT  +QL+ +H    + V+D  ++  GI+   D
Sbjct: 99  PHYDDLMNRTVGDIMTPDFIYVHADTKLTRVLQLMVEHQTRSIPVLDADRRLEGIISRED 158

Query: 335 LLRF 338
           +++ 
Sbjct: 159 VIKA 162



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 34/84 (40%), Gaps = 7/84 (8%)

Query: 200 SENDF---YVLHPGGKLGTL---FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++ DF   +  HP   L             + + D I  V     L   + ++ E +   
Sbjct: 82  TKYDFLNCFAFHPTQMLPHYDDLMNRTVGDIMTPDFIY-VHADTKLTRVLQLMVEHQTRS 140

Query: 254 VAVVDEGQKLKGIITEGDIFRNFH 277
           + V+D  ++L+GII+  D+ +   
Sbjct: 141 IPVLDADRRLEGIISREDVIKALA 164


>gi|45357615|ref|NP_987172.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|45047175|emb|CAF29608.1| Conserved Hypothetical protein with 2 CBS domains [Methanococcus
           maripaludis S2]
          Length = 303

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 1/104 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA  +LS+     + V+D G+KL G+++  D+     + L   +V  +M + 
Sbjct: 184 ITPEKTIRDAAKLLSDANISGIPVMD-GKKLLGVLSLHDVADAVSRGLENENVTKLMAEK 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I ++  +  A+ L+ +HN+  L+V+D+ + AIGI+   D+L
Sbjct: 243 IYTISKNEKIYDALILMEKHNVGRLIVLDNEEIAIGILTRTDIL 286



 Score = 43.0 bits (100), Expect = 0.077,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 284 SVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V DV IK     I  +  +  A +LL   NIS + V+D  +K +G++   D+   
Sbjct: 171 TVGDVGIKEELIYITPEKTIRDAAKLLSDANISGIPVMD-GKKLLGVLSLHDVADA 225



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 25/72 (34%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +       +      + I  +     + DA+ ++ +   G + V+D  +   GI+T 
Sbjct: 223 ADAVSRGLENENVTKLMAEKIYTISKNEKIYDALILMEKHNVGRLIVLDNEEIAIGILTR 282

Query: 270 GDIFRNFHKDLN 281
            DI       + 
Sbjct: 283 TDILNLIEGTIF 294


>gi|260888355|ref|ZP_05899618.1| CBS domain protein/ACT domain protein [Selenomonas sputigena ATCC
           35185]
 gi|260861891|gb|EEX76391.1| CBS domain protein/ACT domain protein [Selenomonas sputigena ATCC
           35185]
          Length = 242

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   V     +  A  ++ + RF  + VVDE  KL G +++ DI R          
Sbjct: 32  RMAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMRVSPSPATTLS 91

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                  L  + + ++M K    + +D  +  A  ++  H I  L 
Sbjct: 92  RYEITSLLAKMCIGEIMQKEVVSVKDDATIEEAALIMYNHKIGGLP 137



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP  +  DT ++ A  L+++H    L VVD+  K +G +   D++R
Sbjct: 33  MAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMR 81


>gi|218883533|ref|YP_002427915.1| putative 6-phospho-3-hexuloisomerase [Desulfurococcus kamchatkensis
           1221n]
 gi|218765149|gb|ACL10548.1| putative 6-phospho-3-hexuloisomerase [Desulfurococcus kamchatkensis
           1221n]
          Length = 201

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 58/127 (45%), Gaps = 6/127 (4%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L +++     E     +  ++ ++  K +V + G G+SG +G   A  L   G  ++ V
Sbjct: 17  ALKAVDLISDDEKEKMIYTLIDALRNNK-KVFVIGAGRSGLVGKAFAMRLLHLGFNTYIV 75

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                    L   +  D+++ +S SG +  + A    A+   + +IAIT+   S +   A
Sbjct: 76  GETI-----LPRASPGDVLVSISGSGRTRLVVAAAEVAKSVGVKVIAITTYPDSPLGKLA 130

Query: 157 DIVLTLP 163
           DIV+ +P
Sbjct: 131 DIVVRIP 137


>gi|307152913|ref|YP_003888297.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
 gi|306983141|gb|ADN15022.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
          Length = 1613

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L   +N+ E DF  + P   +G +    S     G+ +          +     + K+  
Sbjct: 7   LPILKNYIERDFLTVTPETLVGQVLEQMSGGESPGNYLVTPPPNTNPKN-----TPKKKV 61

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVILEDTLLT--VAMQLL 309
             A+V EG+KL G+ TE D  +     L     V DVM +N    LE  +      +  +
Sbjct: 62  SCALVQEGEKLIGLFTERDAVKLTAAQLPLDTCVADVMTRNLITRLESEIGDCCELIHFM 121

Query: 310 RQHNISVLMVVDDCQKAIGIVH 331
           +QH +  L +VD  Q+ +GI+ 
Sbjct: 122 QQHQVRHLPIVDLAQRPVGIIT 143



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK----LKGIITEGDIFRNFHKDLN 281
             +++        ++    ++S+ R  CV + +          G++TE DI     + LN
Sbjct: 166 MSENVIQASPNADVLSLARLMSDHRVSCVVIAESTPTGSIIPVGMVTERDIVTFQAQRLN 225

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L  E++M +   +I  +  L    Q + QH++  L+VV+   +  GI+    LL+ 
Sbjct: 226 SQDLRAEEIMSRPLLLIQPEETLWSGHQKMEQHHVRRLVVVNSKGELRGILTQTTLLQA 284



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/142 (16%), Positives = 50/142 (35%), Gaps = 9/142 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA---ITILSEKRFGCVAVVDEG 260
           F                + V        + ++   + D    I  + + +   + +VD  
Sbjct: 76  FTERDAVKLTAAQLPLDTCVADVMTRNLITRLESEIGDCCELIHFMQQHQVRHLPIVDLA 135

Query: 261 QKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           Q+  GIIT   I  +      L    V +VM +N      +  +    +L+  H +S ++
Sbjct: 136 QRPVGIITPQSIRASLQPTDLLKYRRVAEVMSENVIQASPNADVLSLARLMSDHRVSCVV 195

Query: 319 VVD----DCQKAIGIVHFLDLL 336
           + +         +G+V   D++
Sbjct: 196 IAESTPTGSIIPVGMVTERDIV 217


>gi|87118923|ref|ZP_01074822.1| putative transcriptional regulator [Marinomonas sp. MED121]
 gi|86166557|gb|EAQ67823.1| putative transcriptional regulator [Marinomonas sp. MED121]
          Length = 278

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 53/145 (36%), Gaps = 4/145 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
             AV+ +   + R+   G+G SG +             P                    D
Sbjct: 123 SRAVDILAQAR-RIEFYGLGASGPVAQDAHHKFFRLNMPVVAYIDILVQRMAAAGTHPGD 181

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
            ++V+S++G +  L      AR     +I +T    S +  H  IVL  P E        
Sbjct: 182 AVVVISYTGRTLPLIETARVAREAGATVIGLT-NPNSPLTEHCSIVL--PIEETEDTDIY 238

Query: 174 APTTSAIMQLAIGDALAIALLESRN 198
            P +S I+ L + DALA  +L  R 
Sbjct: 239 TPMSSRIVYLTLIDALATGVLLKRG 263


>gi|300723114|ref|YP_003712412.1| putative transcriptional regulator [Xenorhabdus nematophila ATCC
           19061]
 gi|297629629|emb|CBJ90232.1| putative transcriptional regulator with phosphosugar-binding domain
           [Xenorhabdus nematophila ATCC 19061]
          Length = 282

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++LE+          + AV+ +   + ++   G+G S  +     +       P  +  
Sbjct: 103 MANLETVKNNLDIAAINRAVDLLTQAR-KLSFFGLGASAAVAHDAMNKFFRFNIPVTYFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T  D+++++S +G +  L  +   AR     +IAITS   S +A  A 
Sbjct: 162 DIVMQRMSCINSTEGDVVVLISHTGRTKSLVELAKLARANDTTVIAITS-TNSPLAHEAT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + + L    ++  +   P  S I QL I D LA      R     D
Sbjct: 221 LSILLDVPEDTDIY--MPMVSRIAQLTIIDVLATGFTLRRGSKFRD 264


>gi|150402424|ref|YP_001329718.1| CBS domain-containing protein [Methanococcus maripaludis C7]
 gi|150033454|gb|ABR65567.1| CBS domain containing protein [Methanococcus maripaludis C7]
          Length = 279

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/165 (18%), Positives = 62/165 (37%), Gaps = 6/165 (3%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK 234
           P T  +  +     +   L     ++   F   H         +         D++ L+K
Sbjct: 41  PGTGRVEGILTNMDIVDLLGGGSKYNLVKFKHNH----NMLSAINEPVKEIMTDNVVLIK 96

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               L + I +  E++ G + V+D+   L   I E D+ +     ++  L V+D M +N 
Sbjct: 97  ENAELDEVINLFVEEKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENV 156

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   L    + + ++    L VV +  K +GI+   D ++ 
Sbjct: 157 VFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKL 200



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 54/126 (42%), Gaps = 15/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
              +++     G  L D    +    F  + VV E  KL GIIT  D  + F  D     
Sbjct: 151 CMTENVVFATPGERLKDVARTMLRNGFRRLPVVSEE-KLVGIITSTDFVKLFGSDWAFNH 209

Query: 280 --------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   +  + ++D+M  +   +  D  L  A+  + + NI V+ VVD  +K IG++ 
Sbjct: 210 MKTGNIREITNVRMQDIMKTDIVSVTSDIKLINAVAKMNELNIGVIPVVD-GEKLIGLLT 268

Query: 332 FLDLLR 337
             D+++
Sbjct: 269 EKDIVK 274



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 52/123 (42%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+ ++ +K    ++VVD G  +++GI+T  DI                   
Sbjct: 15  VYPTTKIIEALDMMDKKNIRRISVVDPGTGRVEGILTNMDIVDLLGGGSKYNLVKFKHNH 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V+++M  N  +I E+  L   + L  +  I  + V+D     I  ++  D+
Sbjct: 75  NMLSAINEPVKEIMTDNVVLIKENAELDEVINLFVEEKIGGMPVIDKSGVLITTINERDV 134

Query: 336 LRF 338
           +++
Sbjct: 135 IKY 137



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     I  V     LI+A+  ++E   G + VVD G+K
Sbjct: 204 DWAFNHMKTGNIREITNVRMQDIMKTDIVSVTSDIKLINAVAKMNELNIGVIPVVD-GEK 262

Query: 263 LKGIITEGDIFRNFHK 278
           L G++TE DI +  +K
Sbjct: 263 LIGLLTEKDIVKCIYK 278


>gi|213028674|ref|ZP_03343121.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. 404ty]
          Length = 246

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 30  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 86

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 87  LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 145

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 146 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 202

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 203 LAQLTVIDVLATGFTLRRGAKFRD 226


>gi|187778221|ref|ZP_02994694.1| hypothetical protein CLOSPO_01813 [Clostridium sporogenes ATCC
           15579]
 gi|187775149|gb|EDU38951.1| hypothetical protein CLOSPO_01813 [Clostridium sporogenes ATCC
           15579]
          Length = 131

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 53/124 (42%), Gaps = 3/124 (2%)

Query: 217 FVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
               + V    ++  +V      +  A+ ++SE       V +E   L G+I + DI+R 
Sbjct: 1   MEEINMVCDIMNTHVIVLNPKDSIKKALNLMSENNINGAPVANEEGNLIGMIVKADIYRF 60

Query: 276 F--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  +T  VE VM K      E+  +    + +   +I  + +VD  +K +GIV   
Sbjct: 61  LMEEGHYDTCPVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDSSKKLLGIVSIE 120

Query: 334 DLLR 337
           D+L+
Sbjct: 121 DILK 124


>gi|86748353|ref|YP_484849.1| signal-transduction protein [Rhodopseudomonas palustris HaA2]
 gi|86571381|gb|ABD05938.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris HaA2]
          Length = 339

 Score = 73.4 bits (179), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 47/132 (35%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDL------ 280
           V    P+      L +     V VVD      GII+EGD+       R   +D       
Sbjct: 14  VPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLMPRNETAREARRDWWLQILS 73

Query: 281 ---------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                          +  +   +M+     + E+  L     +L ++ I  + V+ +  +
Sbjct: 74  NGGEVHPDYLQFMRSDHRTAAQIMVSPVVTVDENVPLAEIADILFENKIKRVPVLRE-GR 132

Query: 326 AIGIVHFLDLLR 337
            +GIV   DLL+
Sbjct: 133 IVGIVSRADLLK 144



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM      +  D  +    + L ++ IS + VVD     +GI+   DL+
Sbjct: 1   MKARDVMTTGIVTVPPDAPVRAVAETLLKYGISAVPVVDHHGAPLGIISEGDLM 54


>gi|218281043|ref|ZP_03487619.1| hypothetical protein EUBIFOR_00178 [Eubacterium biforme DSM 3989]
 gi|218217692|gb|EEC91230.1| hypothetical protein EUBIFOR_00178 [Eubacterium biforme DSM 3989]
          Length = 503

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA+MQ   G+ +A AL       F      +      +  +    +  + S  + 
Sbjct: 51  NIPMVSAVMQAVSGEEMACALAREGGVSFIYGSQTIESQAAMVRKVKSTKAGFVGSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     L D I +  E     +AV D      KL GI+T  D   +  +  +++ V++
Sbjct: 110 --ISPEATLEDVIALRKETGHSTMAVTDNGQADGKLVGIVTSRDYRES--RMDHSIQVKE 165

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M    K+I   ED  L+ A  L+ +H ++ L +VD  Q  
Sbjct: 166 FMTPFDKLIVGNEDITLSDANDLIWEHKLNQLPIVDKEQHL 206


>gi|213649632|ref|ZP_03379685.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. J185]
          Length = 239

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 18  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 74

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 75  LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 133

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 134 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 190

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 191 LAQLTVIDVLATGFTLRRGAKFRD 214


>gi|153006330|ref|YP_001380655.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029903|gb|ABS27671.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 142

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 19/108 (17%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
           +    ++     + E   G V + D      G +T+ DI        +  +      VM 
Sbjct: 15  RETDSVLAVALRMREVNIGFVPICDADGHPLGALTDRDIALRVCGEDRRASETRTGAVMT 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      E   +  A +L+ ++  S +M+VD+  + +G++   D++  
Sbjct: 75  REIITCRESDPIEAAEELMARYRKSRMMIVDEDGRLVGVISLSDVVEE 122



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/63 (17%), Positives = 25/63 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               I   +   P+  A  +++  R   + +VDE  +L G+I+  D+           ++
Sbjct: 73  MTREIITCRESDPIEAAEELMARYRKSRMMIVDEDGRLVGVISLSDVVEEEDDRRAAETM 132

Query: 286 EDV 288
             +
Sbjct: 133 RQI 135


>gi|219847967|ref|YP_002462400.1| isocitrate dehydrogenase, NADP-dependent [Chloroflexus aggregans
           DSM 9485]
 gi|219542226|gb|ACL23964.1| isocitrate dehydrogenase, NADP-dependent [Chloroflexus aggregans
           DSM 9485]
          Length = 600

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 4/125 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G ++   S       ++  V     L +    +  +    V V  +     GI+T  D+ 
Sbjct: 471 GKVYPHDSVGAVMTRAVVAVPAEASLRETAIYMRGRNIHSVIVKPDASGQWGIMTMRDVL 530

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +      + ++ L+V D+  +    +  +T +T    L+ + NI  L VV +  + IGI+
Sbjct: 531 KKVVREGRAVDGLTVGDLTTRPLLSVSPETPITECAALMVERNIRRLAVV-ENGEPIGII 589

Query: 331 HFLDL 335
              D+
Sbjct: 590 SETDI 594



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIV 330
           + R   K     SV  VM +    +  +  L      +R  NI  ++V  D   +  GI+
Sbjct: 466 LRRADGKVYPHDSVGAVMTRAVVAVPAEASLRETAIYMRGRNIHSVIVKPDASGQ-WGIM 524

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 525 TMRDVLKK 532


>gi|42543313|pdb|1PVM|A Chain A, Crystal Structure Of A Conserved Cbs Domain Protein Ta0289
           Of Unknown Function From Thermoplasma Acidophilum
 gi|42543314|pdb|1PVM|B Chain B, Crystal Structure Of A Conserved Cbs Domain Protein Ta0289
           Of Unknown Function From Thermoplasma Acidophilum
          Length = 184

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           + G +F+    +M+S      V     + DA+ I++E     + V D+     G+++E  
Sbjct: 3   RGGHMFMRVEKIMNSNFKT--VNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERS 60

Query: 272 IFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           I + F   +K  + + +  VM K    +  D  +      L ++ +    VVDD  + +G
Sbjct: 61  IIKRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVG 120

Query: 329 IVHFLDLLRF 338
           IV   DL R+
Sbjct: 121 IVTLTDLSRY 130



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +     IP VK    + D    LSE      AVVD+  ++ GI+T  D+ R   +
Sbjct: 75  VPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 133


>gi|187934986|ref|YP_001885745.1| nucleotidyl transferase [Clostridium botulinum B str. Eklund 17B]
 gi|187723139|gb|ACD24360.1| nucleotidyl transferase [Clostridium botulinum B str. Eklund 17B]
          Length = 347

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 31/107 (28%), Positives = 59/107 (55%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LV     +   I +L +     + VV E +KLKG++T+GDI R   K+ N + S+ ++M 
Sbjct: 7   LVNKDISIKKGIDVLDKNGKKIIIVV-EDKKLKGVVTDGDIRRWILKNGNISESIYNIMN 65

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+PK +LE        Q+++Q  I  + +V++  + + +V + D+ +
Sbjct: 66  KSPKYLLETER-DNVKQIMKQFKIEAVPIVNEEIEVVDVVFWNDVYQ 111


>gi|104783376|ref|YP_609874.1| DNA-binding transcriptional regulator HexR [Pseudomonas entomophila
           L48]
 gi|95112363|emb|CAK17090.1| transcriptional regulator HexR [Pseudomonas entomophila L48]
          Length = 290

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 65/162 (40%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                  
Sbjct: 106 AIASLDSACQALDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVSAH 164

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                      +    DL +++S++G + EL  +   AR     ++ +T+   S +A   
Sbjct: 165 ADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAQAC 223

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 224 SLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|15893688|ref|NP_347037.1| sugar phosphate aminotransferase involved in capsule formation
           [Clostridium acetobutylicum ATCC 824]
 gi|15023248|gb|AAK78377.1|AE007554_9 Predicted sugar phosphate aminotransferase involved in capsule
           formation [Clostridium acetobutylicum ATCC 824]
 gi|325507810|gb|ADZ19446.1| Sugar phosphate aminotransferase [Clostridium acetobutylicum EA
           2018]
          Length = 182

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 61/168 (36%), Gaps = 12/168 (7%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  L  +   +      +    V+ I   K RV + G G+SG IG   A  L   G   +
Sbjct: 5   KDILGEITQVINNVNESEMDGVVDFITKNK-RVFVCGEGRSGLIGKCFAMRLMHIGYTVY 63

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            I  DD++  +S SG +  +  ++  ++     +I ITS   S +A 
Sbjct: 64  VVGETITP-----SIKADDVLFAISGSGETSMVLNLVRKSKDMGAHIIGITSREGSSLAS 118

Query: 155 HADIVLTLP------KEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +   + +P      K  +     L  +        + DAL + L   
Sbjct: 119 ASFKKIIVPGAVKGDKGTDKKSIQLLSSLFDQSVHIVMDALCLKLSYK 166


>gi|24982449|gb|AAN66646.1|AE016292_6 transcriptional regulator HexR [Pseudomonas putida KT2440]
          Length = 287

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 101 ASAIASLDSACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 160 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAN 218

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 219 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 260


>gi|148546302|ref|YP_001266404.1| DNA-binding transcriptional regulator HexR [Pseudomonas putida F1]
 gi|148510360|gb|ABQ77220.1| transcriptional regulator, RpiR family [Pseudomonas putida F1]
          Length = 290

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDSACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAN 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|114321821|ref|YP_743504.1| signal transduction protein [Alkalilimnicola ehrlichii MLHE-1]
 gi|114228215|gb|ABI58014.1| putative signal transduction protein with CBS domains
           [Alkalilimnicola ehrlichii MLHE-1]
          Length = 166

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 21/138 (15%), Positives = 57/138 (41%), Gaps = 13/138 (9%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H       + +  + VM         + G  L +A   + + R   + VVD+   L G++
Sbjct: 12  HKPSHKEQMNMKVTKVMTRKLITGQPQEG--LREAFFRMKQNRIRHLPVVDDEMNLLGLV 69

Query: 268 TEGDIFR-----------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           T+ ++ R           + +   + +++ DVM  +   +     +  A +++ ++    
Sbjct: 70  TDRNLRRPDWVDEAPDIAHVYYLDDHMTLGDVMTTDVIAVHTYDHVDKAARIMHENRFGA 129

Query: 317 LMVVDDCQKAIGIVHFLD 334
           + V++  ++  G++  +D
Sbjct: 130 VPVLNKEERLDGMLSAVD 147



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 27/61 (44%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           HK+   + V  VM +          L  A   ++Q+ I  L VVDD    +G+V   +L 
Sbjct: 16  HKEQMNMKVTKVMTRKLITGQPQEGLREAFFRMKQNRIRHLPVVDDEMNLLGLVTDRNLR 75

Query: 337 R 337
           R
Sbjct: 76  R 76


>gi|170695632|ref|ZP_02886775.1| putative signal-transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
 gi|170139431|gb|EDT07616.1| putative signal-transduction protein with CBS domains [Burkholderia
           graminis C4D1M]
          Length = 229

 Score = 73.0 bits (178), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 42/128 (32%), Gaps = 25/128 (19%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL----------- 283
               +     +  +       V+D    + GII+EGD+ R      +             
Sbjct: 16  PDMTIRQVAKMFVDNGISGAPVLDTDGSIVGIISEGDLLRRSEIGTDETRRASWLDFWSA 75

Query: 284 -------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                         V DVM  +   +  DT L     +L   ++  + V  +  + +GIV
Sbjct: 76  RHEARDYVKTHAAKVSDVMTTDVVTVQPDTPLGEVAGILEARHVKRVPVT-ERGQVVGIV 134

Query: 331 HFLDLLRF 338
              +L++ 
Sbjct: 135 SRANLVQA 142



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   DVM         D  +    ++   + IS   V+D     +GI+   DLLR
Sbjct: 1   MRASDVMTHTVVSATPDMTIRQVAKMFVDNGISGAPVLDTDGSIVGIISEGDLLR 55


>gi|323490069|ref|ZP_08095290.1| YqzB [Planococcus donghaensis MPA1U2]
 gi|323396365|gb|EGA89190.1| YqzB [Planococcus donghaensis MPA1U2]
          Length = 212

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY     G+  T  +    V        +V+    + DAI+ +     G + VVD+   L
Sbjct: 61  FYSGKKPGQDVTDTMNNMKVKDFQSIPVVVREDVSVYDAISQMFLDDVGTLFVVDKKSHL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L+++ V  +M + P      ++  L  A   L    I  L V
Sbjct: 121 AGVLSRKDLLRASLGSQNLSSIPVHIIMTRMPNITYCAKNESLIQAAHRLINQQIDALPV 180

Query: 320 VD---DCQKAIGIVHFLDLLRF 338
           V+   D  K +G +   ++ R 
Sbjct: 181 VEEQPDGFKVVGRLTKTNITRA 202


>gi|258626368|ref|ZP_05721215.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262190886|ref|ZP_06049104.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae CT 5369-93]
 gi|262402493|ref|ZP_06079054.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. RC586]
 gi|258581420|gb|EEW06322.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|262033247|gb|EEY51767.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae CT 5369-93]
 gi|262351275|gb|EEZ00408.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. RC586]
          Length = 259

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 92  QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 150

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 151 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 209

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 210 --MPMASRVVQMTVIDVLATGFTLRRG 234


>gi|161378139|ref|NP_743182.2| DNA-binding transcriptional regulator HexR [Pseudomonas putida
           KT2440]
          Length = 290

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDSACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAN 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|160898449|ref|YP_001564031.1| inosine-5'-monophosphate dehydrogenase [Delftia acidovorans SPH-1]
 gi|160364033|gb|ABX35646.1| inosine-5'-monophosphate dehydrogenase [Delftia acidovorans SPH-1]
          Length = 491

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NIPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +          V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLQLSENLGISGFPVCD-GGKVVGIVTSRDLRFETRYDV---KVSQIMT 152

Query: 291 KN--PKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + E   T    A  LL +H +  ++VV+D  +  G++   D+ +
Sbjct: 153 PRERLITVNEKDGTTPVEAKALLNKHKLERILVVNDAFELKGLITVKDITK 203


>gi|82617280|emb|CAI64185.1| conserved hypothetical membrane protein [uncultured archaeon]
          Length = 383

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 55/131 (41%), Gaps = 2/131 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGI 266
               ++       S +      I  V+    + + + ++ EK+     VVD+   K+ GI
Sbjct: 244 EKYAEVSVTLEGISVMDLMTREIAYVQDNLTISELLRLMFEKKHLGYPVVDQFTGKIVGI 303

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T  DI      +   + V DVM+KN   I ED     A++ +   N+  L+V D     
Sbjct: 304 VTFTDIRSVPMSEHGNVLVRDVMVKNVIFIPEDADAMDALKSMSTENVGQLLVQD-RGSI 362

Query: 327 IGIVHFLDLLR 337
            GIV   DL R
Sbjct: 363 TGIVSRTDLTR 373


>gi|312877835|ref|ZP_07737783.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor lactoaceticus 6A]
 gi|311795382|gb|EFR11763.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor lactoaceticus 6A]
          Length = 123

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKFALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHYETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+H+IS + V+D+  K +G+V   D++
Sbjct: 75  VITADKNDDIKDVAKLLREHDISAVPVLDN-GKVVGLVGLEDIV 117


>gi|294101984|ref|YP_003553842.1| putative signal transduction protein with CBS domains
           [Aminobacterium colombiense DSM 12261]
 gi|293616964|gb|ADE57118.1| putative signal transduction protein with CBS domains
           [Aminobacterium colombiense DSM 12261]
          Length = 152

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 46/130 (35%), Gaps = 25/130 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  V     + DA+ IL       + VV E  +L G ++E DI +           
Sbjct: 9   MHRDLTAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAIPTYLEILA 68

Query: 278 ----------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
                           K+L    V + M KNP  +     L     L+ +  I  L VV 
Sbjct: 69  QSSFLNNGEIHLVDRFKNLGKKVVREFMTKNPYSVPPSASLMTVADLMLRKKIKRLPVV- 127

Query: 322 DCQKAIGIVH 331
           +  K IGI++
Sbjct: 128 EGNKLIGIIN 137



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 32/59 (54%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                ++M ++   ++E+ L+  A+ +L  HN+S + VV +  + +G +   D+L+  I
Sbjct: 2   NTCAGELMHRDLTAVMEEDLIQDAVHILYSHNLSGIPVVKEDWELVGYLSETDILQAAI 60


>gi|332528906|ref|ZP_08404876.1| inosine-5'-monophosphate dehydrogenase [Hylemonella gracilis ATCC
           19624]
 gi|332041663|gb|EGI78019.1| inosine-5'-monophosphate dehydrogenase [Hylemonella gracilis ATCC
           19624]
          Length = 489

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGMGIIHKNLTAAEQAAQVAKVKRYESGVLR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     +   + +  +       VVD   K+ GI+T  D+      DL    V ++M 
Sbjct: 97  VVINPNATVRQVMQLSDQLGVSGFPVVD-NGKVVGIVTGRDLRFETRYDL---PVREIMT 152

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + + T    A  LL +H +  L++V+D  +  G++   D+ +
Sbjct: 153 PRERLVTMPDGTTPGEAKALLNKHKLERLLLVNDAFELKGLITVKDITK 201


>gi|300869576|ref|ZP_07114157.1| hypothetical protein OSCI_4120036 [Oscillatoria sp. PCC 6506]
 gi|300332444|emb|CBN59357.1| hypothetical protein OSCI_4120036 [Oscillatoria sp. PCC 6506]
          Length = 947

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 5/123 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFH 277
           S +              P   AI ++++ +  CV VV+   E  KL GI TE D+ R   
Sbjct: 5   SAIQAIDRHPLTASPSTPTQMAIAMMAQTQASCVLVVEPVGEDWKLLGIFTERDVVRIAA 64

Query: 278 KDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             L   ++   + +    I E  L  +   + L+  H I  L ++DD    +G +   +L
Sbjct: 65  AGLVESTLASAIDRTLVTIKESELPDIFAVLNLMASHQIFHLPILDDAGFLVGAIEQSNL 124

Query: 336 LRF 338
           L+ 
Sbjct: 125 LKL 127



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 28/57 (49%), Gaps = 6/57 (10%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLLR---FGII 341
           ++P      T   +A+ ++ Q   S ++VV+   +  K +GI    D++R    G++
Sbjct: 12  RHPLTASPSTPTQMAIAMMAQTQASCVLVVEPVGEDWKLLGIFTERDVVRIAAAGLV 68


>gi|288553711|ref|YP_003425646.1| transcriptional regulator with CBS and DRTGG domains [Bacillus
           pseudofirmus OF4]
 gi|288544871|gb|ADC48754.1| transcriptional regulator with CBS and DRTGG domains [Bacillus
           pseudofirmus OF4]
          Length = 435

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/92 (23%), Positives = 43/92 (46%), Gaps = 4/92 (4%)

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           S+       V+DE  +++G++   D+            +E VM KNP  + E T +    
Sbjct: 218 SKTGHSRYPVIDEHMRIQGMVAAKDVLGA----TKQTPIEKVMTKNPITVNERTSVASVA 273

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++    I +L V+D  ++ IG++   D+L+ 
Sbjct: 274 HVMVWEGIELLPVIDSQRRLIGVISRQDVLKA 305


>gi|254283307|ref|ZP_04958275.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           NOR51-B]
 gi|219679510|gb|EED35859.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           NOR51-B]
          Length = 489

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  V     ++  +    S V+      
Sbjct: 41  NIPLISAAMDTVTEARLAIAMAQEGGIGIIHKNMTVAEQAAEVRRVKKFESGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + + + + +      V V+ +G  L GI+T  D+   F  D  T +V  +M 
Sbjct: 98  ITIQHDASIAELLELTNSNGISGVPVL-KGTDLVGIVTRRDLR--FETD-TTQAVSAIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        QLL QH I  ++VV+D     G++   D  + 
Sbjct: 154 PKEKLVTVGEGAPSEEVQQLLHQHRIEKILVVNDDFDLTGMITVKDFDKA 203


>gi|20092886|ref|NP_618961.1| hypothetical protein MA4093 [Methanosarcina acetivorans C2A]
 gi|19918193|gb|AAM07441.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 284

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + IL  K    V V+ +  K+ GI+T      N  ++     +  +M ++P  I   +
Sbjct: 26  EVLKILKNKHISGVPVL-KDSKVVGIVT----RTNLLQNPEEEQLALLMTRDPITISPGS 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L  A +LL QH I  L VVDD  K +G+V   D++
Sbjct: 81  DLQTAARLLLQHGIRRLPVVDD-GKLVGLVTVADVV 115



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 49/116 (42%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +  G  L  A  +L +     + VVD+  KL G++T  D+          + +
Sbjct: 69  MTRDPITISPGSDLQTAARLLLQHGIRRLPVVDD-GKLVGLVTVADVVGTIADMNIDIPI 127

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +D + K    I  +T L V  +++    +  + V+D   + IGI+   D++   +I
Sbjct: 128 KDYVEKEVVAIYNETPLPVVARIMELAGVKAVPVLDAALELIGIISDRDVIAASVI 183



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 25/164 (15%), Positives = 57/164 (34%), Gaps = 36/164 (21%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G +  + +      +    +  +    PL     I+       V V+D   +L GII++
Sbjct: 115 VGTIADMNIDIPIKDYVEKEVVAIYNETPLPVVARIMELAGVKAVPVLDAALELIGIISD 174

Query: 270 GDIFRN----------------------FHKDLNTLSV--------------EDVMIKNP 293
            D+                         +    +T+S+               DVMI+ P
Sbjct: 175 RDVIAASVIEDSVEMSDMSAGQDDDAWTWESMRDTMSIYYSVSRIKVPNLIGNDVMIREP 234

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                   ++   + ++++ I  + +++  +K  G++   DLL+
Sbjct: 235 ITATYIASVSDCARKMKRNRIDQIPIINSNRKLQGLLRDHDLLK 278



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +ED+M+++             +++L+  +IS + V+ D  K +GIV   +LL+
Sbjct: 7   IEDIMVRDVACATLPGSRDEVLKILKNKHISGVPVLKDS-KVVGIVTRTNLLQ 58


>gi|90579018|ref|ZP_01234828.1| cyclic nucleotide binding protein [Vibrio angustum S14]
 gi|90439851|gb|EAS65032.1| cyclic nucleotide binding protein [Vibrio angustum S14]
          Length = 625

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 21/171 (12%)

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLGT--LFVCASDVMHSGDSIPLVKIGCPLID--- 241
           +AL I L +  + S  DF  +  G +L          + + +     L+     +ID   
Sbjct: 109 NALFIELCDKYD-SFADFVEVEDGARLRHAVSSQHDENDLTTSKLRTLITRDAVIIDQNA 167

Query: 242 ----AITILSEKRFGCVAVVDEGQK--------LKGIITEGDI-FRNFHKDLNTL-SVED 287
               A   ++E+    + + D            + GIIT+ D+  R   + ++T   V  
Sbjct: 168 TIQTAAQTMAEEGVSALLLSDSNATDDDDDNDYVTGIITDRDLCTRVLAEGISTSNPVSS 227

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM   P  +  +  +  AM  + ++NI  L V+   ++ IG++   D++R+
Sbjct: 228 VMTAEPITLDHNAYVFEAMLTMLRYNIHHLPVL-RNKQPIGVISVSDIVRY 277


>gi|329901866|ref|ZP_08272953.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327548958|gb|EGF33575.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 161

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 60/134 (44%), Gaps = 5/134 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                       +  +   G+ +  V    P+++A+  ++EK  G + VV E  +L G++
Sbjct: 5   EQQRAGTRKMKVSEILQVKGNILYTVTPETPMLEAVITMAEKDIGSL-VVMEFGELVGML 63

Query: 268 TEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +  ++ +  H++   +    V   M  +P  +  +T +    +L+ + +   + V+D  +
Sbjct: 64  SFREVMKTLHENGGEIGKTLVRKHMDDHPITVTPETEINEVRRLMLERHARYVPVLD-AK 122

Query: 325 KAIGIVHFLDLLRF 338
             +G++ F D+ R 
Sbjct: 123 MLLGVISFYDVARA 136


>gi|312794445|ref|YP_004027368.1| cbs domain containing protein [Caldicellulosiruptor kristjanssonii
           177R1B]
 gi|312181585|gb|ADQ41755.1| CBS domain containing protein [Caldicellulosiruptor kristjanssonii
           177R1B]
          Length = 123

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 53/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
           +   +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  LTDTVKFALEQMQKRKKSVAVVVDENDFLKGIIVKVDIYRFLSQPGHFETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+H+IS + V+D+  K +G+V   D++
Sbjct: 75  VITADKNDDIKDVAKLLREHDISAVPVLDN-GKVVGLVGLEDIV 117


>gi|55377090|ref|YP_134940.1| hypothetical protein rrnAC0168 [Haloarcula marismortui ATCC 43049]
 gi|55229815|gb|AAV45234.1| unknown [Haloarcula marismortui ATCC 43049]
          Length = 142

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/93 (23%), Positives = 41/93 (44%), Gaps = 2/93 (2%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDTLLT 303
           + ++    V VVD    L GI+T  D      K  D   L V + M  +   +  +  + 
Sbjct: 35  MLDENISSVVVVDADGALLGILTSTDFVEIAAKGGDTAGLDVSEFMTTDLVTVTANDPVE 94

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A  ++  H++  L VVD+ +  +G++   D+ 
Sbjct: 95  AAASVMLDHSVHHLPVVDETEGVVGMLTTTDMT 127


>gi|330445656|ref|ZP_08309308.1| helix-turn-helix domain, rpiR family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
 gi|328489847|dbj|GAA03805.1| helix-turn-helix domain, rpiR family protein [Photobacterium
           leiognathi subsp. mandapamensis svers.1.1.]
          Length = 285

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 63/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     S Q + AV+ +   K ++   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDSMQINRAVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +   +  D+++V+S +G +  L  I   AR     +I IT++  S +     
Sbjct: 162 DIVMQRMSVINCSDGDVVVVISHTGRTKSLVEIAQMARINGATVIGITAK-DSPLERECS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSICLDVPEDTDIY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|289192329|ref|YP_003458270.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
 gi|288938779|gb|ADC69534.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus sp. FS406-22]
          Length = 279

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/134 (16%), Positives = 53/134 (39%), Gaps = 2/134 (1%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +    G+     +         +++  +K    + DAI     K  G   +V++  +L  
Sbjct: 68  IREKHGRNFLAAINEPVREIMEENVVTLKESADIDDAIETFLTKNVGGAPIVNDDNQLIS 127

Query: 266 IITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +ITE D+ R     ++   +++  + +   V      L    + + ++    L VV +  
Sbjct: 128 LITERDVIRALLDKIDESETIDGYITRKVIVATPGERLKDVARTMVRNGFRRLPVVSEE- 186

Query: 325 KAIGIVHFLDLLRF 338
           + +GI+   D ++ 
Sbjct: 187 RLVGIITSTDFIKL 200



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 14/127 (11%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
             +    + +   G  L D    +    F  + VV E  +L GIIT  D  +    D   
Sbjct: 149 DGYITRKVIVATPGERLKDVARTMVRNGFRRLPVVSEE-RLVGIITSTDFIKLLGSDWAF 207

Query: 280 ----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                     +  + +E++M ++     E   L    +++  ++I  L VVDD  +  GI
Sbjct: 208 NHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKDIAEIMVTNDIGALPVVDDDLRIKGI 267

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 268 ITEKDVL 274



 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 53/131 (40%), Gaps = 19/131 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIF----------- 273
               I  V     +  A+  ++E R+  + VV+    K+ GIIT  DI            
Sbjct: 8   QNKEIITVYPTTTIRKALITMNENRYRRLPVVNAGNNKVVGIITSMDIVNFMGGGSKYNL 67

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 RNF   +N   V ++M +N   + E   +  A++     N+    +V+D  + I
Sbjct: 68  IREKHGRNFLAAINE-PVREIMEENVVTLKESADIDDAIETFLTKNVGGAPIVNDDNQLI 126

Query: 328 GIVHFLDLLRF 338
            ++   D++R 
Sbjct: 127 SLITERDVIRA 137



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 28/76 (36%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D+   H                     +   K G  L D   I+     G + VVD+  +
Sbjct: 204 DWAFNHMQTGNVREITNVRMEEIMKRDVITAKEGDKLKDIAEIMVTNDIGALPVVDDDLR 263

Query: 263 LKGIITEGDIFRNFHK 278
           +KGIITE D+   F K
Sbjct: 264 IKGIITEKDVLSYFAK 279


>gi|213585603|ref|ZP_03367429.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-0664]
          Length = 228

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 7   LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 63

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 64  LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 122

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 123 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 179

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 180 LAQLTVIDVLATGFTLRRGAKFRD 203


>gi|146312068|ref|YP_001177142.1| DNA-binding transcriptional regulator HexR [Enterobacter sp. 638]
 gi|145318944|gb|ABP61091.1| transcriptional regulator, RpiR family [Enterobacter sp. 638]
          Length = 289

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 7/166 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  +  SL        + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 106 LDHVRQSLDRT---SINRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                         DD+++++S +G +  L  +   AR     +IAIT+   + +A  A 
Sbjct: 162 DIVLQRMSCMNCDEDDVVVLISHTGRTKSLVELAQLARENDAMVIAITT-AGTPLAREAT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 221 LAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|332685857|ref|YP_004455631.1| sialic acid utilization regulator, RpiR family [Melissococcus
           plutonius ATCC 35311]
 gi|332369866|dbj|BAK20822.1| sialic acid utilization regulator, RpiR family [Melissococcus
           plutonius ATCC 35311]
          Length = 286

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/159 (18%), Positives = 54/159 (33%), Gaps = 2/159 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
             F  A   +   K    + G G S      +    A  G               L    
Sbjct: 117 QDFLSAC-VLLEEKEFCYVVGSGASSLAVLDIVQKWARLGKNISTDSDYNFLLPQLVTHQ 175

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           +  ++ ++S SG + EL ++   A+  +IP+I +T   ++ ++  +++ L     P+   
Sbjct: 176 KSTVLWLVSNSGETPELISLAATAKELNIPIITLTQFGQNSLSKVSEVQLQTS-RPKETA 234

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
              A T S   QL   D L    +     +    Y    
Sbjct: 235 LRSAATDSIFAQLVTVDLLFYLYISRNPENAKRIYQTRK 273


>gi|332664634|ref|YP_004447422.1| CBS domain-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332333448|gb|AEE50549.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 146

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 48/124 (38%), Gaps = 14/124 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              ++  V           I  +  F  + VV+  +KL GII++ D              
Sbjct: 11  MTSNLVTVGPQATARTIKDIFDQHEFHHLPVVEGNEKLLGIISKQDFYKVAYVLSLQTTG 70

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                K+   L+  D+M  +P  +  +  + +A  +   +    + VV+D  + IG++  
Sbjct: 71  RTWSEKEYEVLTARDLMTDHPLTLEPEDTIGLAADIFLANQFHAIPVVEDD-RLIGLITT 129

Query: 333 LDLL 336
            DLL
Sbjct: 130 HDLL 133



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              + +VM  N   +           +  QH    L VV+  +K +GI+   D  +   +
Sbjct: 4   NRPISEVMTSNLVTVGPQATARTIKDIFDQHEFHHLPVVEGNEKLLGIISKQDFYKVAYV 63


>gi|315641385|ref|ZP_07896460.1| CBS domain protein [Enterococcus italicus DSM 15952]
 gi|315482878|gb|EFU73399.1| CBS domain protein [Enterococcus italicus DSM 15952]
          Length = 213

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSV 285
                LV     + DAIT L     G + V+DE Q+L G+++  D+ R   + +++   V
Sbjct: 85  MVPPLLVTKDTTIRDAITTLFMYDVGSLYVIDESQELAGVLSRKDLLRASLNTNIDQTPV 144

Query: 286 EDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
              M + P  KV  +D  +  A  +L+   +  L VV +    K IG +    +L
Sbjct: 145 AICMTRVPHIKVATKDMDILEAASILQDFEVDSLPVVSEDNHAKVIGKITKTKIL 199



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D     ++++M+  P ++ +DT +  A+  L  +++  L V+D+ Q+  G++   DLLR 
Sbjct: 75  DSFRTKIDELMVP-PLLVTKDTTIRDAITTLFMYDVGSLYVIDESQELAGVLSRKDLLRA 133


>gi|326792093|ref|YP_004309914.1| hypothetical protein Clole_3019 [Clostridium lentocellum DSM 5427]
 gi|326542857|gb|ADZ84716.1| CBS domain containing membrane protein [Clostridium lentocellum DSM
           5427]
          Length = 150

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 33/141 (23%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V+    L D I IL + +   V VVDE  +L G+++E D+             
Sbjct: 7   MNRPVVFVRNEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLMTKEKGLNISSYI 66

Query: 274 ------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                             R     L T + ++VM      + E+  +   + L+   +I+
Sbjct: 67  AFMTSILGIDGKKQLGESRAI---LQTTTAKEVMSTPAFAVHEEATIEEVVSLMMNRHIN 123

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            + V+++  K +GI+   DLL
Sbjct: 124 RIPVINEDNKLVGIIGRTDLL 144



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 30/54 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M +    +  + LL   + +L +H IS + VVD+  + +G+V   DL+
Sbjct: 1   MRAKDIMNRPVVFVRNEELLEDIINILMKHQISGVPVVDENNQLVGVVSEKDLM 54



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/69 (14%), Positives = 24/69 (34%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
              G+   +    +           V     + + ++++  +    + V++E  KL GII
Sbjct: 79  KQLGESRAILQTTTAKEVMSTPAFAVHEEATIEEVVSLMMNRHINRIPVINEDNKLVGII 138

Query: 268 TEGDIFRNF 276
              D+    
Sbjct: 139 GRTDLLPLL 147


>gi|182439054|ref|YP_001826773.1| hypothetical protein SGR_5261 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178467570|dbj|BAG22090.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 160

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 60/150 (40%), Gaps = 13/150 (8%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           +  +R  +              +    A D+MHSG     +     L  A  ++ E   G
Sbjct: 1   MGCARGRTAVPSARRRK-----SPMTTAKDIMHSG--ARWIPAHETLDRAAQLMREHNVG 53

Query: 253 CVAVVD--EGQKLKGIITEGDIFR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
            + V    +  ++ GIIT+ DI         D   ++  D+    P+ I  +  +   ++
Sbjct: 54  ALPVSANGDSDRMVGIITDRDIVVGCVAKGHDPAKVTAGDLAQGTPRWIEAEADVDAVLE 113

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++ H I  L VV + +K +G++   DL +
Sbjct: 114 EMQTHRIRRLPVV-ENKKLVGMISEADLAQ 142


>gi|158312954|ref|YP_001505462.1| signal-transduction protein [Frankia sp. EAN1pec]
 gi|158108359|gb|ABW10556.1| putative signal-transduction protein with CBS domains [Frankia sp.
           EAN1pec]
          Length = 152

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 49/126 (38%), Gaps = 3/126 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                  S        + +V  G  L  A  +++ +  G   V+D   +  GI+TE D+ 
Sbjct: 19  MRASEGVSVSEGMSALVLVVGPGHTLRQAARLMAARHVGAAVVLDGDGQGFGILTERDVL 78

Query: 274 RNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R     +D +   V D + ++  V   D  L  A   + +     L+V    +   G++ 
Sbjct: 79  RAIAADQDPDVEVVGDHVTRDVVVAAPDWSLDEAAAAMLRGGFRHLVVTTGAE-VEGVLS 137

Query: 332 FLDLLR 337
             D++R
Sbjct: 138 MRDVVR 143



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 25/55 (45%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV + M     V+     L  A +L+   ++   +V+D   +  GI+   D+LR 
Sbjct: 26  SVSEGMSALVLVVGPGHTLRQAARLMAARHVGAAVVLDGDGQGFGILTERDVLRA 80


>gi|325925784|ref|ZP_08187157.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas perforans 91-118]
 gi|325543841|gb|EGD15251.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas perforans 91-118]
          Length = 135

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
            +++EK  G V V+ EG +L GI++E D  R      +  +T SV ++M      +    
Sbjct: 22  RLMAEKAIGAVLVM-EGTRLVGIVSERDYARKVVLRDRASSTTSVAEIMSAEVVTVTPSD 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 81  TVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 117



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 18/100 (18%), Positives = 37/100 (37%), Gaps = 4/100 (4%)

Query: 178 SAIMQLAIGDALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
             + + AIG  L +         SE D+                S        +  V   
Sbjct: 22  RLMAEKAIGAVLVMEGTRLVGIVSERDYA--RKVVLRDRASSTTSVAEIMSAEVVTVTPS 79

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +   + ++++ RF  + VV E  +++G+I+ GD+ +  
Sbjct: 80  DTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKAV 118


>gi|319953379|ref|YP_004164646.1| signal transduction protein with cbs domains [Cellulophaga algicola
           DSM 14237]
 gi|319422039|gb|ADV49148.1| putative signal transduction protein with CBS domains [Cellulophaga
           algicola DSM 14237]
          Length = 153

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
                +++ + + ++       V+D    L GII+E D        R F++ +    V++
Sbjct: 35  SPEQSILEVMELFTKHNISGGPVLDTNGFLVGIISEADCMKTISESRYFNQPILDKRVDN 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M KN + I  D  +  A  +  ++N   L V+      +G +   D++
Sbjct: 95  YMTKNVETIGNDISIFDAAGIFHKNNRRRLPVL-KDGLLVGQISRKDIV 142



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 265 GIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           GI +   I +   K+ +    VED M +       +  +   M+L  +HNIS   V+D  
Sbjct: 2   GIKSFQGIRKVVKKEFDAPILVEDYMTRKLVSFSPEQSILEVMELFTKHNISGGPVLDTN 61

Query: 324 QKAIGIVHFLDLLR 337
              +GI+   D ++
Sbjct: 62  GFLVGIISEADCMK 75


>gi|313884520|ref|ZP_07818281.1| SIS domain protein [Eremococcus coleocola ACS-139-V-Col8]
 gi|312620304|gb|EFR31732.1| SIS domain protein [Eremococcus coleocola ACS-139-V-Col8]
          Length = 271

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 51/139 (36%), Gaps = 4/139 (2%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            ++      L +    +      +   A+  I   K  + + G+G SG+    L +    
Sbjct: 89  ETLNKLTDALKATRQLINE---AELDRAIAAITKAK-HLYVFGVGSSGNTSRNLENMFLR 144

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G     V           ++T +D +I  S SG + +    L  A+ +    IAIT+  
Sbjct: 145 VGVHCNAVIDPHLQAQTASLLTPEDAVIGFSLSGRTKDTFDSLKIAKDYGATTIAITNFL 204

Query: 149 KSVVACHADIVLTLPKEPE 167
            S +A   DIVL    E  
Sbjct: 205 SSPIAKLCDIVLQTAIEEF 223


>gi|229009109|ref|ZP_04166443.1| hypothetical protein bmyco0002_58260 [Bacillus mycoides Rock1-4]
 gi|228752163|gb|EEM01856.1| hypothetical protein bmyco0002_58260 [Bacillus mycoides Rock1-4]
          Length = 263

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/174 (20%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS FK   +      K + ++ + +S+      +   E +L+  L  +   +   +    
Sbjct: 81  FSEFKVKLKMQLKENKKTIIKSSQQSV------IEFFERTLKSNLEEKIKESASLVTKAD 134

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGS 123
             V+  GIG SG +    A   +S G  S ++       H  L     + + I LS SG 
Sbjct: 135 N-VIFIGIGSSGILAEYGARYFSSLGKFSLYIKDPHFPIHSKL---RNNSVTIALSVSGE 190

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +      L   ++    +I+IT+   S +A  +DI +      E        T 
Sbjct: 191 NKFTVTHLNQLKQEGSTIISITNNALSTIAKISDINIPYYVTEEFFEESNITTQ 244


>gi|188584946|ref|YP_001916491.1| CBS domain containing membrane protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179349633|gb|ACB83903.1| CBS domain containing membrane protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 147

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 48/140 (34%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
               I  V     + +A  +++++    + V++    L GIITEGD+     +       
Sbjct: 7   MSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLLGKHKRISPPGYI 66

Query: 279 --------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                     V+D+M      +  +  +      + Q N+  L 
Sbjct: 67  EFLGGIVFTESQDEFFEQLRKYVATQVKDLMSDQVVTVGPEAGIEEIATTMDQKNVKRLP 126

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV    K +GIV   DLL+ 
Sbjct: 127 VV-GEGKLLGIVSRADLLKA 145



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +D+M  +   +  ++ +  A +L+    IS + V++     +GI+   DLL
Sbjct: 1   MRAKDIMSTDIVTVSPESTVEEAAKLMADREISGIPVINSQNDLVGIITEGDLL 54


>gi|302552301|ref|ZP_07304643.1| transcriptional regulator [Streptomyces viridochromogenes DSM
           40736]
 gi|302469919|gb|EFL33012.1| transcriptional regulator [Streptomyces viridochromogenes DSM
           40736]
          Length = 311

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   + L      Q   AV  +   + R  + G+G SG +   L   L   G  +
Sbjct: 132 EQQTLADTAAGLDT---VQLGAAVTALTGAR-RTDVYGVGASGLVAQDLTQKLLRIGLMA 187

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ I ++ SGS+ ++   L  A       +AIT      V 
Sbjct: 188 HAHSDPHLAVTNAVQLRAGDVAIAITHSGSTGDVIEPLRVAFERGATTVAITGRPDGPVT 247

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT     ES     A  +S   QL + D L + + + 
Sbjct: 248 QYADHVLTTSTARESE-LRPAAMSSRTGQLLVVDCLFVGVAQR 289


>gi|302348913|ref|YP_003816551.1| Putative signal transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
 gi|302329325|gb|ADL19520.1| Putative signal transduction protein with CBS domains [Acidilobus
           saccharovorans 345-15]
          Length = 308

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 14/116 (12%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIF------RNFHK-------DL 280
               L  A  ++S   F  + V+      L G+++  D          F K       D+
Sbjct: 187 ETDSLKRAAQLMSLYGFRRIPVLSSDGSYLVGVVSAMDFISYFGSHEAFEKLSSYDIEDV 246

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  V ++M K+   I ED  +  A  L+   N + L+VVD   +  GIV   D+L
Sbjct: 247 LSTRVSEIMSKDVATINEDADIAEAASLMNARNTNSLIVVDQNNEVKGIVTERDVL 302



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
               P             +  +      +     +++A+ ++  KR   + VVD   KL+
Sbjct: 14  ADSEPNWSQRVKEKEGDIISIASKPAISITFTSTILEALELMYSKRVRGLVVVDSSNKLR 73

Query: 265 GIITEGDI-----------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           G I   DI                  R+    L + SVE +M   P      + L+  ++
Sbjct: 74  GTIMATDIVNYLGGGKLYSIVEQRHKRDVFSALRSESVESLMNPTPLYATTSSKLSEVLR 133

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  + I ++ ++       G+V   DL+R+
Sbjct: 134 IMVLNGIGLVPIILSDGTPYGVVTEHDLVRY 164



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 41/101 (40%), Gaps = 1/101 (0%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             L + + I+     G V ++       G++TE D+ R        + V+DVM  +    
Sbjct: 126 SKLSEVLRIMVLNGIGLVPIILSDGTPYGVVTEHDLVRYLVNKDVNVKVKDVMTTSLVAA 185

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLL 336
            E   L  A QL+  +    + V+       +G+V  +D +
Sbjct: 186 FETDSLKRAAQLMSLYGFRRIPVLSSDGSYLVGVVSAMDFI 226



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 25/48 (52%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +  +     + +A ++++ +    + VVD+  ++KGI+TE D+ 
Sbjct: 255 MSKDVATINEDADIAEAASLMNARNTNSLIVVDQNNEVKGIVTERDVL 302


>gi|291485402|dbj|BAI86477.1| acetoin dehydrogenase [Bacillus subtilis subsp. natto BEST195]
          Length = 214

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTL----SVED 287
              L  AI  L E     + VVDE + + G+IT+ D+ +     F ++  +L    SV+ 
Sbjct: 17  TDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDS 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+   +     +     +  +H I  L VV   QK IGI+   DLLR
Sbjct: 77  IMKKDVVCVHPLDFVEEISAVFYEHGIGCLPVV-HHQKLIGILTKTDLLR 125



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE +M ++   + +   L  A+  L++ +I  L VVD+ +  IG++   D+ + 
Sbjct: 3   VEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQA 56



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +LF+  S        +  V     + +   +  E   GC+ VV   QKL GI+T+ D+ 
Sbjct: 66  RSLFLTRSVDSIMKKDVVCVHPLDFVEEISAVFYEHGIGCLPVV-HHQKLIGILTKTDLL 124

Query: 274 RNFHK 278
           R F K
Sbjct: 125 RTFVK 129


>gi|218551498|ref|YP_002385290.1| DNA-binding transcriptional repressor RpiR [Escherichia fergusonii
           ATCC 35469]
 gi|218359040|emb|CAQ91700.1| DNA-binding transcriptional repressor [Escherichia fergusonii ATCC
           35469]
 gi|325499762|gb|EGC97621.1| DNA-binding transcriptional repressor RpiR [Escherichia fergusonii
           ECD227]
          Length = 296

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       K R  + G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQAKQR-DLYGAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DIQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|169349877|ref|ZP_02866815.1| hypothetical protein CLOSPI_00615 [Clostridium spiroforme DSM 1552]
 gi|169293445|gb|EDS75578.1| hypothetical protein CLOSPI_00615 [Clostridium spiroforme DSM 1552]
          Length = 282

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 64/164 (39%), Gaps = 3/164 (1%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
             ++ +L++I+     +  L+ ++       F   +E I   +  VV   +G +  +   
Sbjct: 93  DDIEQSLQNIL--ANKVEELKQTISMLNIENFKKILEIIAKARS-VVFVAVGNTIPVAID 149

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            A      G  +      E   G +  +TRDD++I +S SG S  +   L  A+      
Sbjct: 150 GAFKFNQIGKLALSSTIWETQIGYVCNLTRDDVVIAISNSGESSSVVISLETAKEQGATT 209

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           I+IT+  +S VA  +D  +T     +    G   +      +  
Sbjct: 210 ISITNNEESTVASVSDYHITTATREKLFLDGYCFSRVTATAVIE 253


>gi|144900311|emb|CAM77175.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 205

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 3/107 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
           + G  + +A   +S      + VVDE  +  GIITE D+ +           + +  VM 
Sbjct: 31  RQGITMAEAARRMSRDGISSLVVVDEVGRPVGIITERDMVKALGHHGSGAADIPLGVVMS 90

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    I  D    +AM  + +  +  L+ VD+  K +G+V    L+R
Sbjct: 91  RPVATIRADAFTYLAMGRMDRLKLRHLVAVDETGKGVGVVTARGLMR 137



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 15/72 (20%), Positives = 31/72 (43%)

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T+    R          V +VM        +   +  A + + +  IS L+VVD+  + 
Sbjct: 1   MTDHSSLRRIDGFAYRHRVSEVMGAPLATARQGITMAEAARRMSRDGISSLVVVDEVGRP 60

Query: 327 IGIVHFLDLLRF 338
           +GI+   D+++ 
Sbjct: 61  VGIITERDMVKA 72


>gi|15678766|ref|NP_275883.1| hypothetical protein MTH740 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|2621829|gb|AAB85244.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 134

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 8/120 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------HK 278
               I  V      ++A   + +     + V+++  K  G+++  D+             
Sbjct: 7   MNPEIITVSPETRPLEAFEKMYKHGVRRLFVLEDDGKPVGVVSYTDLIGVLGTIKPDSEH 66

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               L V D+M+     I  D  +  A  L+ + +IS L+V+DD  + +G++   D+ R 
Sbjct: 67  PERDLKVRDIMVDEVITISADDNIEDAANLMLRADISGLLVMDDE-RPVGVITKTDICRL 125



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + V++ M      +  +T    A + + +H +  L V++D  K +G+V + DL+  G++
Sbjct: 1   MKVKEAMNPEIITVSPETRPLEAFEKMYKHGVRRLFVLEDDGKPVGVVSYTDLI--GVL 57


>gi|15603579|ref|NP_246653.1| hypothetical protein PM1714 [Pasteurella multocida subsp. multocida
           str. Pm70]
 gi|12722124|gb|AAK03798.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
          Length = 288

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 4/161 (2%)

Query: 37  GLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            ++++ +     L F      V  +   K R+ + G+G SG       +     G     
Sbjct: 109 AVTNVIAETINLLDFNELEKVVNTMMKAK-RIFLFGVGSSGITAEDAKNKFMRIGLQVDS 167

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                  +    ++   D+++ +S SG S E+   L  A++ S   IAIT   +S +   
Sbjct: 168 TSNNHFMYMQAALMQEGDVVVGISHSGYSKEVIQALNIAKKNSATTIAITHNLRSPITHA 227

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           AD VL                 + I QL + D +   ++++
Sbjct: 228 ADYVLINGNRQG--QLQGDSMGTKIAQLFVLDLIYTLIVQA 266


>gi|292492773|ref|YP_003528212.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
 gi|291581368|gb|ADE15825.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
          Length = 634

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 8/131 (6%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              L    SD+M        V+    +  A  I+  K    + V  E  KL G++T  ++
Sbjct: 498 AARLPHTVSDIMVQNLFT--VRPDDVIDLASRIMDWKHVRHIPVETEKGKLVGLLTIHEL 555

Query: 273 FRN-----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                          + V ++M   P  I  D  +  AMQL+   +   L+VV+  Q  +
Sbjct: 556 LHAHDILSTQDSPRPIPVAEMMNPEPITIPPDMPILEAMQLMLASDTGSLLVVNRTQ-LL 614

Query: 328 GIVHFLDLLRF 338
           GIV   DL+R 
Sbjct: 615 GIVTEQDLVRA 625



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                        +    P+++A+ ++     G + VV+   +L GI+TE D+ R  ++ 
Sbjct: 571 IPVAEMMNPEPITIPPDMPILEAMQLMLASDTGSLLVVNRT-QLLGIVTEQDLVRAAYQL 629

Query: 280 LNTLS 284
           L T+S
Sbjct: 630 LTTIS 634


>gi|53803128|ref|YP_115138.1| hexulose-6-phosphate synthase/SIS domain-containing protein
           [Methylococcus capsulatus str. Bath]
 gi|53756889|gb|AAU91180.1| putative hexulose-6-phosphate synthase/SIS domain protein
           [Methylococcus capsulatus str. Bath]
          Length = 389

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/173 (20%), Positives = 68/173 (39%), Gaps = 15/173 (8%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L++ + S +  L+     A         R+ + G G+SG +G   A  L   G  ++ V 
Sbjct: 226 LAATDKSYEARLTGLLERA--------RRIFVAGAGRSGLVGRFFAMRLMHGGYQAYIVG 277

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I + DL+IV+S SG ++ + A    A+     +  IT+ +KS +   AD
Sbjct: 278 EIVTP-----SIRQGDLLIVISGSGETETMIAYAKKAKEQGASIALITTRDKSTIGDMAD 332

Query: 158 IVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           +V  +    +       P  +      L + +A    ++ ++   E      H
Sbjct: 333 VVFRIGTPEQYGKVVGMPMGTTFELSTLVLLEATISHIIHTKKIPEEQMRTRH 385


>gi|254479877|ref|ZP_05093125.1| inosine-5'-monophosphate dehydrogenase [marine gamma
           proteobacterium HTCC2148]
 gi|214039439|gb|EEB80098.1| inosine-5'-monophosphate dehydrogenase [marine gamma
           proteobacterium HTCC2148]
          Length = 489

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 61/172 (35%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKSMTVAEQAEQVRKVKKYESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++ G  +   I + +      V V+D G+ L GI+T  D+   F  D + L V D+
Sbjct: 96  DPITIEQGATIAALIELTTSHGISGVPVLD-GEDLVGIVTRRDLR--FESDHSKL-VSDI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL QH I  ++VV+D     G++   D  + 
Sbjct: 152 MTPKEKLVTVKEGAGSAEVQGLLHQHRIEKILVVNDAFDLTGMITVKDFDKA 203


>gi|226943687|ref|YP_002798760.1| DNA-binding transcriptional regulator HexR [Azotobacter vinelandii
           DJ]
 gi|226718614|gb|ACO77785.1| transcriptional regulatory protein, RpiR family [Azotobacter
           vinelandii DJ]
          Length = 288

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L+++ QG        AV+ +   + ++   G+G S  +                   
Sbjct: 104 IAALDNTCQGLDPQSVDRAVDLLIQAR-QIHFFGLGASASVALDAQYKFFRFNLAVAAQS 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +++S++G + EL  + Y AR     ++ +T+   S +A    
Sbjct: 163 DVLMQRMLASVAHTGDLFVIISYTGRTRELVEVAYLARENGASVLGLTA-AGSPLARACS 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             L +P +  +  +   P TS I+QL + D LA  +   R 
Sbjct: 222 HNLDVPPQENTDIY--MPMTSRIIQLTVLDVLAAGVTLRRG 260


>gi|304396226|ref|ZP_07378108.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
 gi|304356595|gb|EFM20960.1| transcriptional regulator, RpiR family [Pantoea sp. aB]
          Length = 292

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 57/162 (35%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L+ L+       S     AV  +     ++   G+G S  +     +       P  + 
Sbjct: 102 ALAGLQRVRDQLNSAHLQQAVTLLAQAD-KLAFFGLGASAVVAHDAFTKFLRFNLPVIWS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+ +++S +G +  +  +   AR     +IAITS   S +A  A
Sbjct: 161 DDIVIQRMSCINSRAGDVFVLISHTGRTKNMVELARLARVNGSTVIAITS-PDSPLAHEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            I L L    ++  +   P  S + QL + D LA      R 
Sbjct: 220 AIALVLDVPEDTDVY--LPMVSRLAQLTVIDVLATGFTLERG 259


>gi|257081277|ref|ZP_05575638.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
 gi|256989307|gb|EEU76609.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
          Length = 209

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G+++  D+ R   + ++
Sbjct: 76  KVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNI 135

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 136 DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 195



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V+++M   P ++ +DT +  A+  L  +++  L V+D+ ++ +G++   DLLR 
Sbjct: 71  DVFQTKVQEIMSP-PLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRA 129


>gi|28898499|ref|NP_798104.1| hypothetical protein VP1725 [Vibrio parahaemolyticus RIMD 2210633]
 gi|153836190|ref|ZP_01988857.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
 gi|260365058|ref|ZP_05777629.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
 gi|260879546|ref|ZP_05891901.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
 gi|260894979|ref|ZP_05903475.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|28806717|dbj|BAC59988.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|149750465|gb|EDM61210.1| cyclic nucleotide binding protein/2 CBS domains [Vibrio
           parahaemolyticus AQ3810]
 gi|308086025|gb|EFO35720.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus
           Peru-466]
 gi|308093254|gb|EFO42949.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
 gi|308111715|gb|EFO49255.1| nucleotidyltransferase family [Vibrio parahaemolyticus K5030]
          Length = 626

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/135 (18%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV--------DEGQKLKG 265
           G     A            ++    + +A ++++E+    + +V        ++  +L G
Sbjct: 144 GNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQLLG 203

Query: 266 IITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           I+T+ D+  R   + ++T + V +VM  +   +  +  +  AM  + ++N+  L ++   
Sbjct: 204 ILTDRDLCIRVLAQGIDTNILVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPIL-KD 262

Query: 324 QKAIGIVHFLDLLRF 338
           +K IGI+   D++R+
Sbjct: 263 KKPIGIIGMTDIVRY 277



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/70 (21%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQK 325
           R+   DL T     ++ ++P  +     +  A  L+ + N++ L++V        +D  +
Sbjct: 141 RSDGNDLTTAKARKILTRDPVTLEATASIQEAASLMAEENVTALLIVRPTEELTEEDDDQ 200

Query: 326 AIGIVHFLDL 335
            +GI+   DL
Sbjct: 201 LLGILTDRDL 210


>gi|313637986|gb|EFS03281.1| conserved protein YtoI [Listeria seeligeri FSL S4-171]
          Length = 411

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   D+   +     + D   +  E       VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLDTTAFLSTADKVADWHKMEEETGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LDKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|228963825|ref|ZP_04124961.1| CBS domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
 gi|228795804|gb|EEM43276.1| CBS domain protein [Bacillus thuringiensis serovar sotto str.
           T04001]
          Length = 112

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+  G + VV E +++ G++T+ D+       K   +  + +VM  N   +  +  + 
Sbjct: 1   MKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIE 59

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A +L+ Q+ I  L VVD   + IG++   DL
Sbjct: 60  KATELMAQYQIRRLPVVD-SGQLIGMLALGDL 90


>gi|94266307|ref|ZP_01290010.1| CBS [delta proteobacterium MLMS-1]
 gi|93453098|gb|EAT03574.1| CBS [delta proteobacterium MLMS-1]
          Length = 149

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           VK   P+ +   +L EKR   V VVD+  KL G+ TE D+                    
Sbjct: 15  VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQAKKFHIPTAITILEAVI 74

Query: 274 -----RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                +   K+++ ++   V D+    P  +  +T L     ++ + ++  L V+ +  +
Sbjct: 75  FLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTLPVL-EDGQ 133

Query: 326 AIGIVHFLDLLR 337
            +G++   D++R
Sbjct: 134 LVGVIGKADIIR 145



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            S  ++M +    +  +  +     LL +  IS + VVDD  K +G+    DL+
Sbjct: 2   KSAREIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI 55



 Score = 36.0 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V    PL +  TI++EK    + V+ E  +L G+I + DI R  
Sbjct: 98  CTSEPVTVGPETPLDELATIMAEKHLHTLPVL-EDGQLVGVIGKADIIRTL 147


>gi|90579465|ref|ZP_01235274.1| putative transcriptional regulator [Vibrio angustum S14]
 gi|90439039|gb|EAS64221.1| putative transcriptional regulator [Vibrio angustum S14]
          Length = 285

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 63/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K ++   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDTMQINRAVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +   +  D+++V+S +G +  L  I   AR     +I IT++  S +     
Sbjct: 162 DIVMQRMSVINCSDGDVVVVISHTGRTKSLVEIAQMARANGATVIGITAK-DSPLERECS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSICLDVPEDTDIY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|29375605|ref|NP_814759.1| CBS domain-containing protein [Enterococcus faecalis V583]
 gi|255971478|ref|ZP_05422064.1| CBS domain-containing protein [Enterococcus faecalis T1]
 gi|255974093|ref|ZP_05424679.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256617948|ref|ZP_05474794.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256761782|ref|ZP_05502362.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256957116|ref|ZP_05561287.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256960209|ref|ZP_05564380.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256962549|ref|ZP_05566720.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|257077912|ref|ZP_05572273.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|257083934|ref|ZP_05578295.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|257086382|ref|ZP_05580743.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|257089433|ref|ZP_05583794.1| CBS domain-containing protein [Enterococcus faecalis CH188]
 gi|257418613|ref|ZP_05595607.1| CBS domain-containing protein [Enterococcus faecalis T11]
 gi|257421273|ref|ZP_05598263.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|294779278|ref|ZP_06744682.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|300859747|ref|ZP_07105835.1| putative transcriptional repressor CcpN [Enterococcus faecalis
           TUSoD Ef11]
 gi|29343066|gb|AAO80829.1| CBS domain protein [Enterococcus faecalis V583]
 gi|255962496|gb|EET94972.1| CBS domain-containing protein [Enterococcus faecalis T1]
 gi|255966965|gb|EET97587.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256597475|gb|EEU16651.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256683033|gb|EEU22728.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256947612|gb|EEU64244.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256950705|gb|EEU67337.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256953045|gb|EEU69677.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|256985942|gb|EEU73244.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|256991964|gb|EEU79266.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|256994412|gb|EEU81714.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|256998245|gb|EEU84765.1| CBS domain-containing protein [Enterococcus faecalis CH188]
 gi|257160441|gb|EEU90401.1| CBS domain-containing protein [Enterococcus faecalis T11]
 gi|257163097|gb|EEU93057.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|294453645|gb|EFG22043.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|295114578|emb|CBL33215.1| FOG: CBS domain [Enterococcus sp. 7L76]
 gi|300850565|gb|EFK78314.1| putative transcriptional repressor CcpN [Enterococcus faecalis
           TUSoD Ef11]
 gi|323480263|gb|ADX79702.1| deoR-like helix-turn-helix domain protein [Enterococcus faecalis
           62]
          Length = 209

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G+++  D+ R   + ++
Sbjct: 76  KVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNI 135

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 136 DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 195



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V+++M   P ++ +DT +  A+  L  +++  L V+D+ ++ +G++   DLLR 
Sbjct: 71  DVFQTKVQEIMSP-PLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRA 129


>gi|292653789|ref|YP_003533687.1| conserved protein with 2 CBS domains [Haloferax volcanii DS2]
 gi|291369552|gb|ADE01780.1| conserved protein with 2 CBS domains [Haloferax volcanii DS2]
          Length = 134

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
              ++  V     + DA  ++ +     V VVDE  +L+GI+T  D      K       
Sbjct: 10  MSTTLHTVTPDTLVEDAAQLILDNNISSVIVVDEDNRLEGILTTTDFVDIVAKSQPKAQT 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VE  M  +         +    + + +H    + VVD+ +  IG++   DL
Sbjct: 70  TVERYMTTDVITAGAQDSILSVAESMTEHGFHHMPVVDEEEGVIGMIATSDL 121



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 17/52 (32%), Positives = 28/52 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  +M      +  DTL+  A QL+  +NIS ++VVD+  +  GI+   D +
Sbjct: 6   VARLMSTTLHTVTPDTLVEDAAQLILDNNISSVIVVDEDNRLEGILTTTDFV 57


>gi|296109914|ref|YP_003616863.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
 gi|295434728|gb|ADG13899.1| putative signal transduction protein with CBS domains
           [Methanocaldococcus infernus ME]
          Length = 176

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 48/95 (50%), Gaps = 5/95 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTLSVEDVMIKNPKVIL 297
            + ++ +K      +VD+     GI+T  DI +    N   DL+ +   D+  +    I 
Sbjct: 29  VLELMLKKNKRYCILVDQSNNPVGILTIFDILKYSVLNNTSDLSNVKAMDLATRKIVTIY 88

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVH 331
            +T +  A+++++++NI+ L ++D    K +G++ 
Sbjct: 89  PETSIEDALKIMKKYNITKLPIIDKSTNKIVGVIS 123



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 29/66 (43%), Gaps = 1/66 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L  + V  VM + P  +         ++L+ + N    ++VD     +GI+   D+
Sbjct: 1   MDPSLTNVPVLAVMSE-PLFLRNTLSAEKVLELMLKKNKRYCILVDQSNNPVGILTIFDI 59

Query: 336 LRFGII 341
           L++ ++
Sbjct: 60  LKYSVL 65


>gi|39936479|ref|NP_948755.1| CBS domain-containing protein [Rhodopseudomonas palustris CGA009]
 gi|192292265|ref|YP_001992870.1| CBS domain containing protein [Rhodopseudomonas palustris TIE-1]
 gi|39650335|emb|CAE28857.1| protein with 2 CBS domains [Rhodopseudomonas palustris CGA009]
 gi|192286014|gb|ACF02395.1| CBS domain containing protein [Rhodopseudomonas palustris TIE-1]
          Length = 142

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVE 286
           I  V+    L  A+  L+E+R G V V+  G +L+GI++E D+ R             + 
Sbjct: 14  IHTVEAEARLASAVKTLAERRIGAVLVM-HGTRLEGILSERDVVRVLADRGPAALDEPIG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VM ++     +D  +   M+ +       L V++   + +G++   D+++
Sbjct: 73  AVMTRDVFTCRQDDTVGEIMERMTAGKFRHLPVMEHD-RVVGLISIGDIVK 122


>gi|161502997|ref|YP_001570109.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160864344|gb|ABX20967.1| hypothetical protein SARI_01059 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 289

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|15641161|ref|NP_230793.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121587441|ref|ZP_01677210.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121726279|ref|ZP_01679569.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147674605|ref|YP_001216668.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae O395]
 gi|153214235|ref|ZP_01949270.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153802572|ref|ZP_01957158.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153816941|ref|ZP_01969608.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822022|ref|ZP_01974689.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153826028|ref|ZP_01978695.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|153828682|ref|ZP_01981349.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|227081321|ref|YP_002809872.1| HTH-type transcriptional regulator hexR [Vibrio cholerae M66-2]
 gi|254225536|ref|ZP_04919146.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254291573|ref|ZP_04962363.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|254848276|ref|ZP_05237626.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae MO10]
 gi|255745560|ref|ZP_05419508.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholera CIRS 101]
 gi|261210691|ref|ZP_05924983.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. RC341]
 gi|262158366|ref|ZP_06029482.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae INDRE 91/1]
 gi|262165420|ref|ZP_06033157.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio mimicus VM223]
 gi|262170178|ref|ZP_06037866.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae RC27]
 gi|262171818|ref|ZP_06039496.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio mimicus MB-451]
 gi|298498747|ref|ZP_07008554.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae MAK
           757]
 gi|9655622|gb|AAF94307.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121548361|gb|EAX58425.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121631225|gb|EAX63598.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|124115484|gb|EAY34304.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124121886|gb|EAY40629.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|125622006|gb|EAZ50330.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|126512528|gb|EAZ75122.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126520487|gb|EAZ77710.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146316488|gb|ABQ21027.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|148875835|gb|EDL73970.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|149740248|gb|EDM54395.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|150422525|gb|EDN14482.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227009209|gb|ACP05421.1| HTH-type transcriptional regulator hexR [Vibrio cholerae M66-2]
 gi|227013015|gb|ACP09225.1| HTH-type transcriptional regulator hexR [Vibrio cholerae O395]
 gi|254843981|gb|EET22395.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae MO10]
 gi|255736635|gb|EET92032.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholera CIRS 101]
 gi|260840176|gb|EEX66756.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. RC341]
 gi|261892894|gb|EEY38880.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio mimicus MB-451]
 gi|262021347|gb|EEY40060.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae RC27]
 gi|262025136|gb|EEY43804.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio mimicus VM223]
 gi|262029807|gb|EEY48455.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio cholerae INDRE 91/1]
 gi|297543080|gb|EFH79130.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae MAK
           757]
 gi|327483852|gb|AEA78259.1| Phosphogluconate repressor HexR, RpiR family [Vibrio cholerae
           LMA3894-4]
          Length = 284

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|262274490|ref|ZP_06052301.1| hypothetical protein VHA_001467 [Grimontia hollisae CIP 101886]
 gi|262221053|gb|EEY72367.1| hypothetical protein VHA_001467 [Grimontia hollisae CIP 101886]
          Length = 147

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 53/125 (42%), Gaps = 12/125 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL---- 280
           +    +  +     + +A  ++ +K    + VV E   L GII++  + R    D     
Sbjct: 8   YMTRKLITISPEKGIREAYFLMRDKDIRHLPVV-ENDALVGIISDRQLRRPNWADESPDI 66

Query: 281 -------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  + L+V DVMIK+         L+ A Q L  HNI  + V+D     +G++  +
Sbjct: 67  EHPYLLSDDLTVGDVMIKDIITCHTYETLSKANQKLLDHNIGAMPVLDKTGDLVGMLSAV 126

Query: 334 DLLRF 338
           DLL  
Sbjct: 127 DLLAA 131



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V D M +    I  +  +  A  L+R  +I  L VV++    +GI+ 
Sbjct: 4   KVSDYMTRKLITISPEKGIREAYFLMRDKDIRHLPVVEND-ALVGIIS 50


>gi|209528198|ref|ZP_03276667.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
 gi|209491364|gb|EDZ91750.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
          Length = 1778

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 25/131 (19%)

Query: 232 LVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGD 271
           LV +     +AI ++SE R  C                      +V EG++L GI+T+GD
Sbjct: 22  LVTVETTAREAIALMSESRASCSISSKASVLLEEVYGEARSSCVLVVEGEQLVGILTQGD 81

Query: 272 IFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAI 327
           I R     + L  L V +VM  +     E  L      + LLR++ I  L +VDD  + +
Sbjct: 82  IIRLCTEKRPLEQLLVGEVMTASVLSWRESELSDFFEVIDLLRKNQICHLPLVDDSDRLV 141

Query: 328 GIVHFLDLLRF 338
           G++   + LR+
Sbjct: 142 GLIT-HETLRY 151



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 51/110 (46%), Gaps = 10/110 (9%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMIKNPKVI 296
             + I +L + +   + +VD+  +L G+IT   +    H  DL  L +VE+VM       
Sbjct: 116 FFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTVEEVMTTEVICA 175

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDC--------QKAIGIVHFLDLLRF 338
             ++ L     L+ Q+ ++ +++V+             +GI+   D+++F
Sbjct: 176 SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTAVNVPVGILTEGDIVKF 225



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGII 267
                 +VM +            L++   ++++ R  CV +V+              GI+
Sbjct: 160 RLRTVEEVMTTEVICA--SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTAVNVPVGIL 217

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           TEGDI +   F  DL   S + +M      +  +  L    +L+    I  ++V     +
Sbjct: 218 TEGDIVKFNTFCLDLENYSSKQLMSTPVFSVATNENLWRIHELMSSQYIRRVLVTGSHGE 277

Query: 326 AIGIVHFLDLLR 337
            +GIV    +L+
Sbjct: 278 LLGIVTQTSMLK 289


>gi|186470844|ref|YP_001862162.1| signal transduction protein [Burkholderia phymatum STM815]
 gi|184197153|gb|ACC75116.1| putative signal transduction protein with CBS domains [Burkholderia
           phymatum STM815]
          Length = 193

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 7/121 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
           +   ++MH+      V     LI A   L +KR GC+ V D G +  G++T  DI  R  
Sbjct: 1   MLVKEIMHAAIC---VGPQDSLIAAARKLRDKRIGCLPVCD-GGRALGVLTGRDIAVRAT 56

Query: 277 H--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              ++L  ++  +VM         D  +  A+QL+ Q ++  L+V+    + +G++   D
Sbjct: 57  AQGRNLTDMTAREVMSVGALCCSLDDTVERAVQLMEQFHVRRLVVLSGETRVVGVISASD 116

Query: 335 L 335
           +
Sbjct: 117 I 117


>gi|85711652|ref|ZP_01042709.1| transcriptional regulator, RpiR family protein [Idiomarina baltica
           OS145]
 gi|85694512|gb|EAQ32453.1| transcriptional regulator, RpiR family protein [Idiomarina baltica
           OS145]
          Length = 286

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/194 (18%), Positives = 64/194 (32%), Gaps = 8/194 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           Q   +   +    LS    SL           VE + + + ++   G G S  +     +
Sbjct: 93  QITQKIFDSTLNALSIARQSLDSR---PIAATVEAMVSAR-KIAFFGFGASASVAHDAQN 148

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
             A   TPS F                +D+++ +S +G +  L  I   A      +I I
Sbjct: 149 KFARFDTPSVFSDDPLVQRMWAINSEPNDVLVCISHTGRTKALCEIAAIAHNNKATVIGI 208

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS-END 203
           T+   S ++ +    ++     ++  +   P  S I QL + DA+       R       
Sbjct: 209 TA-PNSPLSENCQFTVSTNVPEDTDQY--MPMASRIAQLVLIDAIIAGYTLQRGPKFREK 265

Query: 204 FYVLHPGGKLGTLF 217
              +  G K     
Sbjct: 266 LARVKEGLKGSRYS 279


>gi|326504078|dbj|BAK02825.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 454

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/139 (23%), Positives = 53/139 (38%), Gaps = 32/139 (23%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + +A  ++ +K+ GCV VVD    L+GI+T GDI R   +       
Sbjct: 289 MSKHFIKVTSAATIKEATLLMHDKQQGCVLVVDNEDFLEGIVTVGDIRRRGFESSEDANS 348

Query: 279 --------DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMVV- 320
                   D+N+  V   + +                DT L+ A  L+    I  L VV 
Sbjct: 349 TGENSSVLDVNSALVTSCLTRGFQYHGSGRGLVTCFPDTDLSTAKVLMEVKGIKQLPVVK 408

Query: 321 -------DDCQKAIGIVHF 332
                  D  +K +G++H+
Sbjct: 409 RGAGRRNDGRRKVLGLLHY 427



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K+   +     +  A  L+       ++VVD+     GIV   D+ R G
Sbjct: 280 LDELKVSRAMSKHFIKVTSAATIKEATLLMHDKQQGCVLVVDNEDFLEGIVTVGDIRRRG 339


>gi|269102314|ref|ZP_06155011.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
 gi|268162212|gb|EEZ40708.1| Signal transduction protein [Photobacterium damselae subsp.
           damselae CIP 102761]
          Length = 626

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 56/122 (45%), Gaps = 11/122 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGIITEGDI-FRNFH 277
                +++  C +  A   ++++    + + D            + GIIT+ D+  R   
Sbjct: 157 TREAVIIENHCTIQYAAQTMADENISSLLISDPEINPEDDELDPIVGIITDRDLCTRVLA 216

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + L+  L V+DVM  N   +  +  +  AM  + + N+  L V+   QKA+G++   D++
Sbjct: 217 QGLDVNLPVKDVMSTNLITLDHNAYVFEAMLTMLRCNVHHLPVM-RNQKALGVLSMSDIV 275

Query: 337 RF 338
           R+
Sbjct: 276 RY 277


>gi|152992739|ref|YP_001358460.1| hypothetical protein SUN_1148 [Sulfurovum sp. NBC37-1]
 gi|151424600|dbj|BAF72103.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
          Length = 608

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 54/136 (39%), Gaps = 4/136 (2%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +              + A           +V    P+++A+  L  ++   + V +E   
Sbjct: 130 EMIKERQESAKMADIMVARIDEAILHDACMVDADMPIVEALAKLESEKAVALLVKNEKG- 188

Query: 263 LKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             GI+T+ D+ +     ++ N  ++  +       + E  LL   + L+  ++I  L V 
Sbjct: 189 -YGIVTDADLRKYILHKEEQNLQTISQIQSYPIIAVHEGELLFNVLLLMTGNSIKHLPVT 247

Query: 321 DDCQKAIGIVHFLDLL 336
           D   + +GI+  +DLL
Sbjct: 248 DGNGEPVGILTLIDLL 263


>gi|239906839|ref|YP_002953580.1| nucleotidyltransferase [Desulfovibrio magneticus RS-1]
 gi|239796705|dbj|BAH75694.1| nucleotidyltransferase [Desulfovibrio magneticus RS-1]
          Length = 934

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIIT 268
           G     +                ++    +  A  I++      + VV +G +   G+I 
Sbjct: 311 GLLYAQINPQIHARQLMSKPAVSIEDNATMRRAEEIMTRYGLKALPVVAKGGRRCVGVI- 369

Query: 269 EGDIF-RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           E DI  +  +  L  +SV + M+++P VI  DT L   M+++      +  V  +  K +
Sbjct: 370 EHDIMDKAINHGLGDVSVSEYMMRDPAVITPDTDLYAVMEVILGRRQRLAPVA-EDGKLV 428

Query: 328 GIVHFLDLL 336
           G+V   DL+
Sbjct: 429 GVVTRTDLV 437


>gi|254476772|ref|ZP_05090158.1| CBS domain protein [Ruegeria sp. R11]
 gi|214031015|gb|EEB71850.1| CBS domain protein [Ruegeria sp. R11]
          Length = 144

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           +     + +A  +L E + G V V  +G+  +GI++E DI R   +      +   ++ M
Sbjct: 18  IAPNATISEAAKLLGEHKIGTVVVSSDGETAEGILSERDIVRELARTGPSCLSDCAKNYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +        + +   +Q + +     + VV++  K IG+V   D+++ 
Sbjct: 78  TRKLVTCTSQSNVEEVLQQMTEGRFRHMPVVEE-GKLIGLVSLGDVVKA 125



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 24/50 (48%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  I  +  ++ A +LL +H I  ++V  D + A GI+   D++R 
Sbjct: 11  ASSGVVTIAPNATISEAAKLLGEHKIGTVVVSSDGETAEGILSERDIVRE 60


>gi|114566624|ref|YP_753778.1| hypothetical protein Swol_1097 [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114337559|gb|ABI68407.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
          Length = 222

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 21/131 (16%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--------IFRN- 275
                         + +   ++ EK    V V+D   KL GIIT  D        + R+ 
Sbjct: 6   RMTPKPYATTPDTCVGELWHLMQEKSLQRVPVLDR-GKLIGIITRRDFNARPELDLKRSS 64

Query: 276 ---------FHKDLNTLSVEDVM--IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                      + L+ L V D++   +    I +D  +  A +LLR + IS L V+DD  
Sbjct: 65  LATRFFPEEMEQKLSKLRVRDIIPLNQQLITIHQDAFIEQAAKLLRDNRISGLPVIDDEG 124

Query: 325 KAIGIVHFLDL 335
           + +GI+   DL
Sbjct: 125 RMVGIITQSDL 135



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + V+D M   P     DT +     L+++ ++  + V+D   K IGI+   D
Sbjct: 1   MKVKDRMTPKPYATTPDTCVGELWHLMQEKSLQRVPVLD-RGKLIGIITRRD 51



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 26/58 (44%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              D++     +  +     +  A  +L + R   + V+D+  ++ GIIT+ D+   F
Sbjct: 82  RVRDIIPLNQQLITIHQDAFIEQAAKLLRDNRISGLPVIDDEGRMVGIITQSDLSDAF 139


>gi|46203958|ref|ZP_00209185.1| COG3448: CBS-domain-containing membrane protein [Magnetospirillum
           magnetotacticum MS-1]
          Length = 396

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 61/199 (30%), Gaps = 23/199 (11%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF-YVLHPGGKLGTLFVCAS 221
           P   ++ P    P     +  A  DA      +  +    D   +L        L     
Sbjct: 177 PHVAQAAPLAPVPAGRLGLTSADIDAALEDFDQVLDIDRGDLEALLRRAQLSSLLRRSGP 236

Query: 222 DVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               S  +  +V      PL +A+T+L       + V DE  ++ G++T+ D+      D
Sbjct: 237 TTCASLLTRDVVAIAPEAPLREALTLLRRHHIKMLPVTDERARVLGVLTQTDLMDKVEWD 296

Query: 280 LNTLS--------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                                      DVM    + +  D  L      + Q     L V
Sbjct: 297 GRGPRLGFARRWQLTLGRGRAPHGCAADVMTTEVESLRPDMSLAQVAARMAQSGHHHLPV 356

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V    + +G+V   +L+  
Sbjct: 357 VGPDGRLVGVVSQSNLVAA 375


>gi|297616686|ref|YP_003701845.1| hypothetical protein Slip_0496 [Syntrophothermus lipocalidus DSM
           12680]
 gi|297144523|gb|ADI01280.1| CBS domain containing membrane protein [Syntrophothermus
           lipocalidus DSM 12680]
          Length = 217

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 50/129 (38%), Gaps = 16/129 (12%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------- 275
            +    +  +     +IDA  +++      + +V E  KL GI+T  D+           
Sbjct: 5   YYMSTDVKTISPDASVIDAFVLMNRNNIRRLPIV-ENGKLVGIVTLSDLENVPINKPTTL 63

Query: 276 ----FHKDLNTLSVEDVM--IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                   L    + D+M   +    +  D  L  A  L+R+H I  L V+++  K +GI
Sbjct: 64  NFFGTSYLLEKTLLRDIMPENREVITVGPDDYLETAAALMREHVIGALPVLEND-KIVGI 122

Query: 330 VHFLDLLRF 338
           +   D+   
Sbjct: 123 ITETDIFDA 131



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+  M  + K I  D  +  A  L+ ++NI  L +V +  K +GIV   DL
Sbjct: 1   MKVKYYMSTDVKTISPDASVIDAFVLMNRNNIRRLPIV-ENGKLVGIVTLSDL 52



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            D+M     +  V     L  A  ++ E   G + V+ E  K+ GIITE DIF  F +
Sbjct: 78  RDIMPENREVITVGPDDYLETAAALMREHVIGALPVL-ENDKIVGIITETDIFDAFTR 134


>gi|239995957|ref|ZP_04716481.1| CBS domain containing membrane protein [Alteromonas macleodii ATCC
           27126]
          Length = 139

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------RNFHKDL 280
           V +   L     + +   F  + VV    KL+GII++ D+             R   +  
Sbjct: 14  VHMDDSLQSLRELFAATGFHHLVVV-HDNKLQGIISDRDLMKSISPFVDTLSERKLDRAT 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +M +    +     +  A++L   H IS + ++D  +  +G+V + D+++F
Sbjct: 73  LDKKAHQIMTREVITLNPSDSVYSAIELFNTHKISCIPIIDTKRHPVGMVSWRDVMKF 130


>gi|110805797|ref|YP_689317.1| DNA-binding transcriptional regulator HexR [Shigella flexneri 5
           str. 8401]
 gi|110615345|gb|ABF04012.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
          Length = 289

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 38/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+   R I       L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTRKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|332290474|ref|YP_004421326.1| inosine 5'-monophosphate dehydrogenase [Gallibacterium anatis
           UMN179]
 gi|330433370|gb|AEC18429.1| inosine 5'-monophosphate dehydrogenase [Gallibacterium anatis
           UMN179]
          Length = 523

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 62/168 (36%), Gaps = 12/168 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       +AIAL +     F   +  +     ++  +    S ++   +  
Sbjct: 75  NIPILSAAMDTVTEAKMAIALAQEGGIGFIHKNMSIERQAERVRKVKKFESGIV---NDP 131

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V+    L +   +  + +F    V  E   L GI+T  D    F  DL +L V  VM 
Sbjct: 132 ITVRPTTTLAEVAELTKKNKFAGYPVTTEEGDLLGIVTGRDTR--FVSDL-SLPVTSVMT 188

Query: 291 K--NPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  + E           L+ +H +  ++VV+D  K  G++   D
Sbjct: 189 PKERLVTVTEGDSFDRDHIFSLMHRHRVEKILVVNDQFKLKGMITLKD 236


>gi|323526749|ref|YP_004228902.1| CBS domain-containing protein [Burkholderia sp. CCGE1001]
 gi|323383751|gb|ADX55842.1| CBS domain containing protein [Burkholderia sp. CCGE1001]
          Length = 152

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 53/109 (48%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L DA+  ++E   G + VV E   L G++T  +I     ++   + T ++  VM
Sbjct: 17  VTPDTALHDAVVTMAEHDIGSL-VVMEYGDLVGMLTFREIILTLKENGGSVGTSTIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P     +T +    +++ +H++  L V+ + +  +G++ F D+ + 
Sbjct: 76  DDHPLTCTPETDVNEVRRMMLEHHVRYLPVL-ESRTLMGVISFYDVAKA 123



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTALHDAVVTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|228475857|ref|ZP_04060569.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
 gi|228270089|gb|EEK11554.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
          Length = 183

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +F     ++     R+ + G G+SG + +  A  L   G  +F + 
Sbjct: 12  LDELKGTLSHVKDEEFDGFASEVTEAS-RIFVAGKGRSGFVANSFAMRLNQLGKQAFVIG 70

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I + DL IV+S SGS++ L+ +   A+     ++ +T++  S +   AD
Sbjct: 71  ESTTP-----SIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIAD 125

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q      D++ I L+   +  E      H
Sbjct: 126 TVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQLDVDETTMQNNH 179


>gi|225677997|gb|EEH16281.1| inosine-5'-monophosphate dehydrogenase IMD2 [Paracoccidioides
           brasiliensis Pb03]
 gi|226287252|gb|EEH42765.1| inosine-5'-monophosphate dehydrogenase IMD2 [Paracoccidioides
           brasiliensis Pb18]
          Length = 548

 Score = 73.0 bits (178), Expect = 6e-11,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 27/230 (11%)

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVA-----CHADIVLTLPKEPESCPHGLA 174
           +SG   ++  ++   +R      A+T  +  ++        +D+ L  P          A
Sbjct: 36  YSGDGLDINELINSDKRG-----ALTYNDFLILPGYIGFPASDVSLETPVTKRITL--KA 88

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSI 230
           P  S+ M      ++AI +            V+H              V           
Sbjct: 89  PLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADDQAEMVRKVKRYENGFILEP 143

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +A T+  +  FG   V ++G    KL G+IT  DI  +   D     V  
Sbjct: 144 VVISPKTTVAEAKTLKEKWGFGGFPVTEDGTLPSKLIGMITSRDIQFHTAGD---DPVTA 200

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  +       T L  A ++LR      L +VD     + ++   DL++
Sbjct: 201 VMSTDLITAPSGTTLAEANEVLRSSKKGKLPIVDSEGNLVSLLSRSDLMK 250


>gi|325970090|ref|YP_004246281.1| RpiR family transcriptional regulator [Spirochaeta sp. Buddy]
 gi|324025328|gb|ADY12087.1| transcriptional regulator, RpiR family [Spirochaeta sp. Buddy]
          Length = 284

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 6/161 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L  +ES +  +       +VE I      ++I+GIG SG +   L   LA  G  + F
Sbjct: 109 ESLRGIESVIDPK---AVEESVEAILHAS-HLLISGIGASGVVAIDLQQKLARLGLKAVF 164

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
              ++    +   + + D++I +S+SG ++ +  +   A++    +IAIT    + ++  
Sbjct: 165 TADSDMQIVEACALHKQDVLIAISYSGETNSVLKVAREAKKNESTVIAITRIGGNSLSKL 224

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ADI L +         G   T S   QL + D +   +L  
Sbjct: 225 ADITLNVVNSESLFREGA--TLSRFGQLLVVDFIYTMILAR 263


>gi|227893098|ref|ZP_04010903.1| transcriptional regulator [Lactobacillus ultunensis DSM 16047]
 gi|227865076|gb|EEJ72497.1| transcriptional regulator [Lactobacillus ultunensis DSM 16047]
          Length = 298

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 6/159 (3%)

Query: 12  TRKGHSL--MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
             K HSL  +    +Q ALR I   K  ++ ++++L+  +       +  +      V +
Sbjct: 96  NEKSHSLQNLAQDNLQTALRQID--KNKIAEVKATLEN-IDNHLLKQILALLTHSRIVQV 152

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           +  G +  +           G  +       E +      +T DD ++V+S SG S  L 
Sbjct: 153 SAEGDTYPVAEDAIYKFNQIGILAIGSGGNVETAIAQSMNLTADDCLLVISNSGESAALL 212

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
             +  A++  + +IAIT+   S +A  AD  L       
Sbjct: 213 KQIQVAKKQGLKIIAITNREDSPIALEADYHLQTAVRQT 251


>gi|289805304|ref|ZP_06535933.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. AG3]
          Length = 259

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 38  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 94

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 95  LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 153

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 154 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 210

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 211 LAQLTVIDVLATGFTLRRGAKFRD 234


>gi|289209027|ref|YP_003461093.1| cyclic nucleotide-binding protein [Thioalkalivibrio sp. K90mix]
 gi|288944658|gb|ADC72357.1| cyclic nucleotide-binding protein [Thioalkalivibrio sp. K90mix]
          Length = 615

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 51/137 (37%), Gaps = 6/137 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV--VDEGQK 262
               P G+   L      +M     +        L +A   ++E     + +    +G  
Sbjct: 132 AATSPAGERSLLTTPVRALMTPRPIMS--PTSLTLREAAQRMTEADISALLLHAPGQGDI 189

Query: 263 LKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
             GI+T+ D+        +   SV + M +    +  DT    A+  + + +I  L V +
Sbjct: 190 PVGILTDTDLRHALAAGTDPGCSVAECMAQPVAAVSRDTPAFDALLRMARRDIHHLPVTN 249

Query: 322 -DCQKAIGIVHFLDLLR 337
            +    +GI+   DL+R
Sbjct: 250 GENGPLVGILSSTDLIR 266



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 12/82 (14%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRN--- 275
            S        +  V    P  DA+  ++ +    + V + E   L GI++  D+ R+   
Sbjct: 211 CSVAECMAQPVAAVSRDTPAFDALLRMARRDIHHLPVTNGENGPLVGILSSTDLIRHQGT 270

Query: 276 ----FHKDLNTL----SVEDVM 289
                 +DL       ++ DVM
Sbjct: 271 SAVYLVRDLRRADGLDALRDVM 292



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 12/83 (14%)

Query: 269 EGDIFRN-------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV- 320
           + D  R          + L T  V  +M   P +      L  A Q + + +IS L++  
Sbjct: 124 DTDRLRAPAATSPAGERSLLTTPVRALMTPRPIMSPTSLTLREAAQRMTEADISALLLHA 183

Query: 321 -DDCQKAIGIVHFLDL---LRFG 339
                  +GI+   DL   L  G
Sbjct: 184 PGQGDIPVGILTDTDLRHALAAG 206


>gi|126737918|ref|ZP_01753648.1| CBS domain protein [Roseobacter sp. SK209-2-6]
 gi|126721311|gb|EBA18015.1| CBS domain protein [Roseobacter sp. SK209-2-6]
          Length = 144

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     + DA  +LS+K+ G V V  +G+   GI++E DI R   ++     T  V   M
Sbjct: 18  VTPDTLVSDAARLLSDKKIGTVMVSSDGEAADGILSERDIVRELGQNGPGCLTDPVSSYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     + +   ++ +       + V+ +  K  G++   D+++ 
Sbjct: 78  TSKLVTCTAQSNVEEVLKQMTTGRFRHMPVL-EDGKLKGLISLGDVVKA 125



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  DTL++ A +LL    I  +MV  D + A GI+   D++R 
Sbjct: 16  ITVTPDTLVSDAARLLSDKKIGTVMVSSDGEAADGILSERDIVRE 60


>gi|58337456|ref|YP_194041.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227904092|ref|ZP_04021897.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
 gi|58254773|gb|AAV43010.1| transcriptional regulator [Lactobacillus acidophilus NCFM]
 gi|227868111|gb|EEJ75532.1| transcriptional regulator [Lactobacillus acidophilus ATCC 4796]
          Length = 279

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 71/166 (42%), Gaps = 14/166 (8%)

Query: 9   KSVTRKGHSL--MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
            S   K  SL  + N  +Q AL+ I   K  ++ + ++L+   S      +  +  +K R
Sbjct: 74  ASSNEKSQSLKDIANDDLQIALKQID--KNKIAEIRATLENIDSKTLEDVLNLL--VKSR 129

Query: 67  VV-ITGIGKSGHIGSKLASTLASTGTPSF----FVHAAEASHGDLGMITRDDLIIVLSWS 121
           VV ++  G +  + +     +   G  +      V  A A   +LG   +DD ++V+S S
Sbjct: 130 VVQVSAEGDTYPVAADAVYKMNQIGILAMASGGNVETAIAQSMNLG---QDDCLLVISNS 186

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           G S  L   +  A+   I ++AIT+   S +A  AD  L       
Sbjct: 187 GESAALLNQIKVAKNQGIKIVAITNRADSPIALEADYHLQTAVRQT 232


>gi|323490324|ref|ZP_08095539.1| putative signal transduction protein with CBS domains [Planococcus
           donghaensis MPA1U2]
 gi|323395994|gb|EGA88825.1| putative signal transduction protein with CBS domains [Planococcus
           donghaensis MPA1U2]
          Length = 140

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTLSVEDVMI 290
                 L +  +++ E   G + +  E  +L GI+T+ DI  R   + L +  ++ +++ 
Sbjct: 14  CMPESTLQEVASMMREINVGAIPIC-EKGRLVGIVTDRDIIVRGMAEQLPSDTAIAEILS 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +       D     A +L+ +H I  L +V++  + IGI+ + DL
Sbjct: 73  EEVITGTIDLSAEQAAELMTEHKIRRLPIVEND-RIIGIISWCDL 116



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 9/54 (16%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +E++M  + +  + ++ L     ++R+ N+  + + +   + +GIV   D++
Sbjct: 1   MRIEEIMTTDVETCMPESTLQEVASMMREINVGAIPICEK-GRLVGIVTDRDII 53


>gi|315185925|gb|EFU19690.1| sodium/hydrogen exchanger [Spirochaeta thermophila DSM 6578]
          Length = 557

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LS 284
                +V     L + + + +E  +   AVVD   + +G++   ++     +      + 
Sbjct: 430 PADRAVVPNTIRLSELLRLYAEHDWNVWAVVDAEDRYRGVVGFENLREALAEPELQEFVI 489

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            ED++   P+ +   T L  A++++R+ N+  L V+DD    +GI+
Sbjct: 490 AEDILTPFPETVHPHTPLHEALRIMRRRNVDFLPVLDDRGHVLGIL 535



 Score = 39.5 bits (91), Expect = 0.82,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL +A+ I+  +    + V+D+   + GI+ E  +     ++L +    
Sbjct: 501 VHPHTPLHEALRIMRRRNVDFLPVLDDRGHVLGILEERMVRHFVRRELLSAQAR 554


>gi|295099727|emb|CBK88816.1| IMP dehydrogenase/GMP reductase [Eubacterium cylindroides T2-87]
          Length = 503

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/161 (24%), Positives = 61/161 (37%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA+MQ   G+ +A AL       F      V      +  +    +  + S  + 
Sbjct: 51  NIPMVSAVMQAVSGEEMACALAREGGISFIFGSQSVESQAAMVRKVKATKAGFVGSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     L D I +  +     +AV D      KL GIIT  D      +      V++
Sbjct: 110 --ISPEATLADVIALKEKTGHSTMAVTDNGEADGKLVGIITSRDYR--ISRMDKATKVKE 165

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M    K+I   ED  L+ A  L+  H ++ L +VDD Q  
Sbjct: 166 FMTPFEKLIVGKEDISLSEANDLIWDHKLNQLPIVDDEQHL 206


>gi|172034995|ref|YP_001801496.1| chloride channel protein [Cyanothece sp. ATCC 51142]
 gi|171696449|gb|ACB49430.1| chloride channel protein [Cyanothece sp. ATCC 51142]
          Length = 882

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 42/93 (45%), Gaps = 3/93 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              L + +  +S        VV E  +L GI+T+ D+ +   K      + + M + P  
Sbjct: 469 DLSLDEVLQAMSNSTHRGFPVV-EQGQLVGIVTQTDLAK-LKKVPGYTPLSEFMTRRPIT 526

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  ++ L+  + LL ++ +S L V  +  K +G
Sbjct: 527 VQAESSLSDVLYLLNRYQLSRLPVT-EGHKLVG 558



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L+   VM  + + +  D  L   +Q +         VV +  + +GIV   DL +  
Sbjct: 450 LSKLTASQVMESHVETLSSDLSLDEVLQAMSNSTHRGFPVV-EQGQLVGIVTQTDLAKLK 508


>gi|83643060|ref|YP_431495.1| CBS domain-containing protein [Hahella chejuensis KCTC 2396]
 gi|83631103|gb|ABC27070.1| FOG: CBS domain [Hahella chejuensis KCTC 2396]
          Length = 138

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 5/117 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLN 281
                  V     +I+A+ IL +K      VV+E + + G I+E D  +      +    
Sbjct: 11  MDTHPAFVAADASIIEAVDILLKKGISGAPVVNEHKHVIGFISEKDCIKKLLLSSYHCDA 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +V +VM K    +  +  +      +  H   V  VVDD  K +G++    +L  
Sbjct: 71  PATVGEVMHKATVTVDPEASIVDLANYMDDHRPKVYPVVDD-GKLVGVISRTHVLMA 126



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 27/57 (47%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + D M  +P  +  D  +  A+ +L +  IS   VV++ +  IG +   D ++ 
Sbjct: 4   DIKISDFMDTHPAFVAADASIIEAVDILLKKGISGAPVVNEHKHVIGFISEKDCIKK 60


>gi|313633081|gb|EFR99985.1| conserved protein YtoI [Listeria seeligeri FSL N1-067]
          Length = 442

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 40/198 (20%), Positives = 74/198 (37%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   D+   +     + D   +  E       VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLDTTAFLSTADKVADWHKMEEETGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LDKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|76801961|ref|YP_326969.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76557826|emb|CAI49410.1| CBS domain protein 5 [Natronomonas pharaonis DSM 2160]
          Length = 167

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/144 (24%), Positives = 50/144 (34%), Gaps = 39/144 (27%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           V     + D +T L+   F    VV E   L GI+T+GD+   F     TL         
Sbjct: 14  VAPDDDVGDVLTRLARANFNGFPVV-EDGLLVGIVTQGDLVDLFQPSDRTLWIPVGFPPF 72

Query: 284 ---------------------------SVEDVMIKNPKVILEDTLLTVAMQLL--RQHNI 314
                                       V +VM ++   +  D  L   + LL  R  +I
Sbjct: 73  LESLTYGVDLSWDEFDLGRDMAKNAGRPVSEVMTEDVVTVGPDADLDAVLALLADRDRDI 132

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L VVD     +GI+   DLL  
Sbjct: 133 NRLPVVDGAGVVLGIIAREDLLAA 156



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M    + +  D  +   +  L + N +   VV +    +GIV   DL+
Sbjct: 1   MQARDIMTDEVETVAPDDDVGDVLTRLARANFNGFPVV-EDGLLVGIVTQGDLV 53


>gi|328944770|gb|EGG38931.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1087]
          Length = 280

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/193 (18%), Positives = 74/193 (38%), Gaps = 7/193 (3%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDPDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEP-ESCPHGLAPTTSAIMQLAIGDALAI 191
            A++     + +TS+N   +    D ++ +  +   +  + ++P    ++ + I  A  +
Sbjct: 192 NAKKVGAKTVLVTSKNSDDLRQQCDELVLVAVKKHLAQGNNISPQFPVLVVMDIFYAYYM 251

Query: 192 ALLESRNFSENDF 204
            L   R++    F
Sbjct: 252 DL--DRDYRSQIF 262


>gi|213964110|ref|ZP_03392350.1| CBS domain containing protein [Capnocytophaga sputigena Capno]
 gi|213953247|gb|EEB64589.1| CBS domain containing protein [Capnocytophaga sputigena Capno]
          Length = 138

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             +  +     L +A  +  +     + VV EG KL GI++  D+ R 
Sbjct: 1   MRQRVPISQIMSKELVTLTPDQSLYEAERLFKKHHIRHIPVV-EGDKLIGIVSYSDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              D+               ++  +M K P  +  DT +    ++L   +   + VVD+ 
Sbjct: 60  SFADMTDGEEEVTSVVYDMYTIPQIMAKTPLTVTADTSIKEVAEILAAQSFHSIPVVDN- 118

Query: 324 QKAIGIVHFLDLLRF 338
            K +G+V   DL+++
Sbjct: 119 GKLVGLVTTTDLIKY 133



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +   IL+ + F  + VVD   KL G++T  D+ +  
Sbjct: 92  VTADTSIKEVAEILAAQSFHSIPVVD-NGKLVGLVTTTDLIKYL 134


>gi|331269184|ref|YP_004395676.1| putative sugar-phosphate nucleotide transferase [Clostridium
           botulinum BKT015925]
 gi|329125734|gb|AEB75679.1| probable sugar-phosphate nucleotide transferase [Clostridium
           botulinum BKT015925]
          Length = 345

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 20/101 (19%), Positives = 47/101 (46%), Gaps = 1/101 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVE 286
             +  V     + DA+  + +   G V + ++ +K+ G++T+G++ R   K      SV+
Sbjct: 1   MDMYCVSDDATIKDAMESIDKNLIGAVFITNKDKKVIGVVTDGNVRRAILKGYTIADSVK 60

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           ++   + K +          + + ++NI  L ++D+  K I
Sbjct: 61  NIYHNDFKYVNNLVSKQKVKEKMLKYNIRQLPLLDEQGKLI 101



 Score = 36.0 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 8/37 (21%), Positives = 20/37 (54%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + +D  +  AM+ + ++ I  + + +  +K IG+V 
Sbjct: 5   CVSDDATIKDAMESIDKNLIGAVFITNKDKKVIGVVT 41


>gi|168177082|pdb|2QH1|A Chain A, Structure Of Ta289, A Cbs-Rubredoxin-Like Protein, In Its
           Fe+2-Bound State
 gi|168177083|pdb|2QH1|B Chain B, Structure Of Ta289, A Cbs-Rubredoxin-Like Protein, In Its
           Fe+2-Bound State
          Length = 198

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           + G +F+    +M+S      V     + DA+ I++E     + V D+     G+++E  
Sbjct: 17  RGGHMFMRVEKIMNSNFKT--VNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERS 74

Query: 272 IFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           I + F   +K  + + +  VM K    +  D  +      L ++ +    VVDD  + +G
Sbjct: 75  IIKRFIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVG 134

Query: 329 IVHFLDLLRF 338
           IV   DL R+
Sbjct: 135 IVTLTDLSRY 144



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +     IP VK    + D    LSE      AVVD+  ++ GI+T  D+ R   +
Sbjct: 89  VPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLSR 147


>gi|295102586|emb|CBL00131.1| transcriptional regulator, RpiR family [Faecalibacterium
           prausnitzii L2-6]
          Length = 288

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 70/187 (37%), Gaps = 5/187 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           + +   +    ++Q  +  +    + + SL  + +  L  +    VE I   +  ++  G
Sbjct: 83  SHREKDITPQDSLQEIVEKVT--HKNIQSLLDTQRLLLLDELEQCVELIANARTVLLF-G 139

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           IG S  +             P      + +        T  D+ IV S+SG + E+   +
Sbjct: 140 IGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNATAQDVGIVFSYSGQTMEMIQCI 199

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
              +    P+IA+T    S VA  AD VL +        +G    +S + QL + D L  
Sbjct: 200 KEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFRNGA--MSSRLSQLNVMDILYT 257

Query: 192 ALLESRN 198
           A     +
Sbjct: 258 AYASRNH 264


>gi|291287158|ref|YP_003503974.1| CBS domain containing membrane protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290884318|gb|ADD68018.1| CBS domain containing membrane protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 137

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------KDL 280
               + D I  + +K    + VVD+  K+    +E D+ +                 ++L
Sbjct: 16  PEETIKDVILKMRKKNVSGLPVVDKNNKVLATFSETDVAKALPDILNEAQYIPLVDVREL 75

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  ++ VM      I  DT +T A +++ +     L VVDD    IG+V   D+L+ 
Sbjct: 76  TSEPIKRVMEIPAYSIKADTNVTEAARIVLEKFRHRLPVVDDAGHLIGLVTLGDILKA 133



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M  N      +  +   +  +R+ N+S L VVD   K +      D+ + 
Sbjct: 1   MKVSEIMTTNLITADPEETIKDVILKMRKKNVSGLPVVDKNNKVLATFSETDVAKA 56



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 23/51 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  +K    + +A  I+ EK    + VVD+   L G++T GDI +  
Sbjct: 84  MEIPAYSIKADTNVTEAARIVLEKFRHRLPVVDDAGHLIGLVTLGDILKAL 134


>gi|206563572|ref|YP_002234335.1| hypothetical protein BCAM1723 [Burkholderia cenocepacia J2315]
 gi|198039612|emb|CAR55580.1| putative membrane protein [Burkholderia cenocepacia J2315]
          Length = 391

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVAAALTLLDRHRVKALPVVDGEGRLTGIVTRADLTRQLRRPAPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + E   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPASVASVMTRDVASVPETMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/65 (29%), Positives = 30/65 (46%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L   D+M K+   +   T +  A+ LL +H +  L VVD   +  GIV  
Sbjct: 236 MQAYTRTFGQLKCADLMTKHAIEVAPSTSVAAALTLLDRHRVKALPVVDGEGRLTGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 338 VPETMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTQMLEAA 391


>gi|254381637|ref|ZP_04997001.1| CBS [Streptomyces sp. Mg1]
 gi|194340546|gb|EDX21512.1| CBS [Streptomyces sp. Mg1]
          Length = 216

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 44/117 (37%), Gaps = 18/117 (15%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI----------------FRNFHKDLNT 282
             +  T +   +   V V++   ++ G+++E D+                 R        
Sbjct: 25  FKEIATAMERWKVTAVPVIEGEGRVVGVVSEADLLTKEEFHAQGPSLIEQMRRLGDTAKA 84

Query: 283 LSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            SV  E +M      I  D  L  A +L+   +I  L VVD     +GIV   DLL+
Sbjct: 85  GSVRAEQLMTSPAVTIRPDATLPRAARLMADRHIKRLPVVDANGTLLGIVSRADLLK 141



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/67 (17%), Positives = 26/67 (38%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                        ++    L  A  +++++    + VVD    L GI++  D+ + F + 
Sbjct: 87  VRAEQLMTSPAVTIRPDATLPRAARLMADRHIKRLPVVDANGTLLGIVSRADLLKVFLRS 146

Query: 280 LNTLSVE 286
              L+ E
Sbjct: 147 DEDLAAE 153



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM K    +            + +  ++ + V++   + +G+V   DLL
Sbjct: 7   TVNDVMTKTVVTVTAAAEFKEIATAMERWKVTAVPVIEGEGRVVGVVSEADLL 59


>gi|161528076|ref|YP_001581902.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160339377|gb|ABX12464.1| putative signal-transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 133

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 41/106 (38%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V      +    ++ +   G V V D G  L GI+T+ D       +      +VE +M 
Sbjct: 25  VNPNTTALQVAKMMEQGGIGAVIVKD-GDDLVGIVTDRDYATKIAANNLPFDTTVEKIMS 83

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                I +   ++ A + +    I  L V D+     GI+   DL+
Sbjct: 84  SPLITINQGEPISAAAETMASKKIRKLAVSDNGN-ITGIITSTDLV 128



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + +++ V+D+M +    +  +T      +++ Q  I  ++V D     +GIV   D
Sbjct: 8   NSSSIKVQDIMTRALITVNPNTTALQVAKMMEQGGIGAVIVKDGDD-LVGIVTDRD 62


>gi|313632953|gb|EFR99883.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria seeligeri FSL N1-067]
 gi|313637567|gb|EFS02977.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria seeligeri FSL S4-171]
          Length = 283

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 6/162 (3%)

Query: 32  IAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
              ++ +S++  +L    S     +   A E +      +   G+G S  +   ++    
Sbjct: 96  AITEKLVSNMTQTLNDTASQLNETKVLEACELLGQADT-IYTYGVGASWLVAEDISQKWL 154

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G        A           +  + I +S SG + E+  ++  A+  ++ +I++T  
Sbjct: 155 RAGKHVLATQDAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVTVISLTRF 214

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             + +   AD+ L   + PE+     A T+S   QL + D L
Sbjct: 215 GNNKLKEKADLSLETSRAPEAEIRSTA-TSSRQAQLLVVDIL 255


>gi|118486285|gb|ABK94984.1| unknown [Populus trichocarpa]
          Length = 447

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 29/129 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------------DL 280
           V +   L +AI  + + +  C+ VVD+   L+GI+T GDI R                D+
Sbjct: 286 VSLSLTLKEAIKYMHDCKQNCLLVVDDEDLLEGILTYGDIRRLSKTSSDASTGDSTIIDV 345

Query: 281 NTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ------- 324
           NT  V  V           +       DT L +A  L+    I  L VV           
Sbjct: 346 NTCLVSTVCTREIRYRGQVRGLLTCYPDTDLAIAKDLMEAKGIKQLPVVKRSGGSQKDWK 405

Query: 325 -KAIGIVHF 332
            + + I+H+
Sbjct: 406 RRVVAILHY 414



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 274 RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              ++DL    L V   M KN   +     L  A++ +     + L+VVDD     GI+ 
Sbjct: 262 EAINEDLLAENLKVSKAMSKNYAKVSLSLTLKEAIKYMHDCKQNCLLVVDDEDLLEGILT 321

Query: 332 FLDLLRF 338
           + D+ R 
Sbjct: 322 YGDIRRL 328


>gi|151944216|gb|EDN62498.1| hypothetical protein SCY_2325 [Saccharomyces cerevisiae YJM789]
          Length = 277

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 67/166 (40%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G++T  DI   F +D ++L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGVVTSRDI--QFVED-SSLLVQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|148979110|ref|ZP_01815318.1| hypothetical protein VSWAT3_05546 [Vibrionales bacterium SWAT-3]
 gi|145961976|gb|EDK27265.1| hypothetical protein VSWAT3_05546 [Vibrionales bacterium SWAT-3]
          Length = 629

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 57/119 (47%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDL 280
           P+++    +  A T+++E+    + ++D         +   + GIIT+ D+  R   + L
Sbjct: 161 PMIEKTRTIQQAATMMAEENVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  V  VM      +  +  +  AM  + ++N+  L V+   +K IGI+   D++R+
Sbjct: 221 DPSDEVSSVMTPEVISLDHNAYVYEAMMTMLRYNVHHLPVL-KDKKPIGIIEATDIVRY 278


>gi|328957277|ref|YP_004374663.1| glycine betaine/carnitine/choline transport ATP-binding protein
           OpuCA [Carnobacterium sp. 17-4]
 gi|328673601|gb|AEB29647.1| glycine betaine/carnitine/choline transport ATP-binding protein
           OpuCA [Carnobacterium sp. 17-4]
          Length = 397

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 52/130 (40%), Gaps = 5/130 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF       +          VM        V  G  + +AI ++ +KR   + V D+  
Sbjct: 236 EDFIGEDRLIQARPNIQTVDQVMIKNPIS--VTPGKSISEAIRLMRDKRVDSLFVTDDSG 293

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            LKG +   DI +         SV D+MI     + E TLL   +Q + +     + VVD
Sbjct: 294 VLKGYV---DIEKIDRNRKRATSVGDIMIDKVYFVREGTLLRDTVQRILKRGFKNIPVVD 350

Query: 322 DCQKAIGIVH 331
           +  + IG+V 
Sbjct: 351 NKGRLIGLVT 360



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 27/59 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      N  +V+ VMIKNP  +     ++ A++L+R   +  L V DD     G V  
Sbjct: 243 RLIQARPNIQTVDQVMIKNPISVTPGKSISEAIRLMRDKRVDSLFVTDDSGVLKGYVDI 301


>gi|289434946|ref|YP_003464818.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289171190|emb|CBH27732.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 283

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 6/162 (3%)

Query: 32  IAEKRGLSSLESSLQGELSF----QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
              ++ +S++  +L    S     +   A E +      +   G+G S  +   ++    
Sbjct: 96  AITEKLVSNMTQTLNDTASQLNETKVLEACELLGQADT-IYTYGVGASWLVAEDISQKWL 154

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G        A           +  + I +S SG + E+  ++  A+  ++ +I++T  
Sbjct: 155 RAGKHVLATQDAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVTVISLTRF 214

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             + +   AD+ L   + PE+     A T+S   QL + D L
Sbjct: 215 GNNKLKEKADLSLETSRAPEAEIRSTA-TSSRQAQLLVVDIL 255


>gi|262373745|ref|ZP_06067023.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter junii SH205]
 gi|262311498|gb|EEY92584.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter junii SH205]
          Length = 488

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I        V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITQANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGENNELKGLITVTDFRKA 203


>gi|226953399|ref|ZP_03823863.1| IMP dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|294651894|ref|ZP_06729184.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter haemolyticus
           ATCC 19194]
 gi|226835855|gb|EEH68238.1| IMP dehydrogenase [Acinetobacter sp. ATCC 27244]
 gi|292822217|gb|EFF81130.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter haemolyticus
           ATCC 19194]
          Length = 488

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I        V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELIAITQANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGENNELKGLITVTDFRKA 203


>gi|305665510|ref|YP_003861797.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
 gi|88710266|gb|EAR02498.1| CBS domain protein [Maribacter sp. HTCC2170]
          Length = 154

 Score = 73.0 bits (178), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 8/139 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F       K             S   +        +++ +   ++       V+D+   L
Sbjct: 6   FQGFRKAAKKEFDAPILVSDYMSTKLVTFAPEQ-SILEVMEQFAKHHISGGPVLDDNGFL 64

Query: 264 KGIITEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            GII+E D        R F++ +   SVE  M K  + I  D  +  A  +  +HN   L
Sbjct: 65  VGIISEADCMKQISESRYFNQPILDKSVEKYMTKGVETIPHDISIFDAAGIFDKHNRRRL 124

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            V+      +G +   D++
Sbjct: 125 PVM-KDGLLVGQISRKDVV 142



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 265 GIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           GI +     +   K+ +    V D M         +  +   M+   +H+IS   V+DD 
Sbjct: 2   GIKSFQGFRKAAKKEFDAPILVSDYMSTKLVTFAPEQSILEVMEQFAKHHISGGPVLDDN 61

Query: 324 QKAIGIVHFLDLLR 337
              +GI+   D ++
Sbjct: 62  GFLVGIISEADCMK 75


>gi|239636811|ref|ZP_04677813.1| 6-phospho 3-hexuloisomerase [Staphylococcus warneri L37603]
 gi|239598166|gb|EEQ80661.1| 6-phospho 3-hexuloisomerase [Staphylococcus warneri L37603]
          Length = 183

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 69/162 (42%), Gaps = 9/162 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +F     ++     R+ + G G+SG + +  A  L   G  +F + 
Sbjct: 12  LDELKGTLSHVKDEEFDGFASEVTEAS-RIFVAGKGRSGFVANSFAMRLNQLGKQAFVIG 70

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I + DL IV+S SGS++ L+ +   A+     ++ +T++  S +   AD
Sbjct: 71  ESTTP-----SIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIAD 125

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLES 196
            V+ LP   +    G   P  S   Q      D++ I L+  
Sbjct: 126 TVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMTQ 167


>gi|238799192|ref|ZP_04642642.1| RpiR-family transcriptional regulator [Yersinia mollaretii ATCC
           43969]
 gi|238716950|gb|EEQ08816.1| RpiR-family transcriptional regulator [Yersinia mollaretii ATCC
           43969]
          Length = 292

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG       
Sbjct: 112 LQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAEDAK 161

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G            +    ++   D+ I +S SG+S E    L  A++     +A
Sbjct: 162 GKLMRIGLRVDAATNNHFMYMQASLMRPGDVAIGISHSGTSAETVQALKLAKQAGATTVA 221

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 222 LTHNMGSTITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|254487602|ref|ZP_05100807.1| CBS domain protein [Roseobacter sp. GAI101]
 gi|214044471|gb|EEB85109.1| CBS domain protein [Roseobacter sp. GAI101]
          Length = 144

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 55/121 (45%), Gaps = 4/121 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-- 281
             + DS+  VK G  + +A  +LSEKR G + +  +G+   GI++E DI R      +  
Sbjct: 9   TKADDSVTTVKPGVLISEAAKMLSEKRIGTLVICSDGKTPDGILSERDIVRALGVQGDAC 68

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             ++VE +M K       D      +  + +     + V+      +G++   D+++  +
Sbjct: 69  LNMTVESLMTKELVTCGTDARSDEILTKMTEGRFRHMPVL-ADGALVGLISLGDVVKAQL 127

Query: 341 I 341
           +
Sbjct: 128 M 128


>gi|168486753|ref|ZP_02711261.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
 gi|183570232|gb|EDT90760.1| AcuB family protein [Streptococcus pneumoniae CDC1087-00]
          Length = 218

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 14/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +     +  A  ++ E+    + V+ E  +L G++TEG I +              +  L
Sbjct: 14  ISPDTTVSHAADLMREQELHRLPVI-ENDQLVGLVTEGTIAQASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           N   V+DVMI++   +     L  A  L+ ++ I +L VVD+ Q   G++   D+ +
Sbjct: 73  NKTKVKDVMIRDVVTVSGYASLEDATYLMLKNKIGILPVVDNHQ-VYGVITDRDVFQ 128



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V+D M +    I  DT ++ A  L+R+  +  L V+++ Q  +G+V    + + 
Sbjct: 1   MAVKDFMTRKVVYISPDTTVSHAADLMREQELHRLPVIENDQ-LVGLVTEGTIAQA 55



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DA  ++ + + G + VVD   ++ G+IT+ D+F++F
Sbjct: 81  MIRDVVTVSGYASLEDATYLMLKNKIGILPVVD-NHQVYGVITDRDVFQSF 130


>gi|78062154|ref|YP_372062.1| CBS domain-containing protein [Burkholderia sp. 383]
 gi|77970039|gb|ABB11418.1| CBS domain containing membrane protein [Burkholderia sp. 383]
          Length = 391

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVTAALTLLDRHRVKALPVVDGEGRLTGIVTRADLTRQLRRPTPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + E   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPASVATVMTRDVACVPETMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    LS  D+M KN   +   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 236 MQAYTRTFGQLSCADLMTKNAIEVAPSTSVTAALTLLDRHRVKALPVVDGEGRLTGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 24/61 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L  
Sbjct: 331 MTRDVACVPETMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYRQTQMLEA 390

Query: 286 E 286
            
Sbjct: 391 A 391


>gi|319653848|ref|ZP_08007942.1| hypothetical protein HMPREF1013_04561 [Bacillus sp. 2_A_57_CT2]
 gi|317394384|gb|EFV75128.1| hypothetical protein HMPREF1013_04561 [Bacillus sp. 2_A_57_CT2]
          Length = 279

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 66/162 (40%), Gaps = 5/162 (3%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSII----AEKRGLSSLESSLQGELSFQFHCAVEKI 60
           F+ FK   ++   L         ++ I       +  L  +E++ +    F    A+  +
Sbjct: 68  FNEFKHELKRYIDLRNKPAASSDIKEIDYFSNLYQNHLEIIETTFRNMTYFDIQQAITLL 127

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              + RV + GIG SG    +        G     +     +  D  + +   L+I +S 
Sbjct: 128 TKAE-RVHVYGIGNSGIAAQEFKWKFFRIGIQVESITDPHQAVMDAALSSDRSLVIGISV 186

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           SG + E+   +  ++R    ++AI+S+  S ++  AD+ L +
Sbjct: 187 SGKTKEIIDAVKISKRQGASVLAISSDKTSELSRLADLSLLV 228


>gi|195970029|ref|NP_437810.2| putative inosine-5'-monophosphate dehydrogenase protein
           [Sinorhizobium meliloti 1021]
 gi|307309412|ref|ZP_07589071.1| CBS domain containing protein [Sinorhizobium meliloti BL225C]
 gi|307321343|ref|ZP_07600742.1| CBS domain containing protein [Sinorhizobium meliloti AK83]
 gi|186929520|emb|CAC49670.2| conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306892988|gb|EFN23775.1| CBS domain containing protein [Sinorhizobium meliloti AK83]
 gi|306900142|gb|EFN30761.1| CBS domain containing protein [Sinorhizobium meliloti BL225C]
          Length = 146

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + L      +      ++E   G + V D+  +L G+IT+ DI  R     ++   
Sbjct: 7   MTRDVHLASPNDTITAVARQMAENDIGFMPVGDDD-RLIGMITDRDIVVRGVADGMDPQA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V D+M  + K   +D  +    + +    +  L VV+  ++ +GIV   D
Sbjct: 66  RVADIMTTDVKYCFDDDEVDDVARNMGDIQVRRLPVVNHDKQLVGIVSLAD 116



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V ++M ++  +   +  +T   + + +++I  + V DD  + IG++   D++  G+
Sbjct: 1   MRVSEIMTRDVHLASPNDTITAVARQMAENDIGFMPVGDDD-RLIGMITDRDIVVRGV 57


>gi|400057|sp|P31002|IMDH_ACICA RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|38720|emb|CAA47328.1| IMP dehydrogenase [Acinetobacter calcoaceticus]
          Length = 488

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I I S      V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVSPETTVRELIAITSANNISGVPVV-KDSKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 203


>gi|226359682|ref|YP_002777460.1| hypothetical protein ROP_02680 [Rhodococcus opacus B4]
 gi|226238167|dbj|BAH48515.1| hypothetical protein [Rhodococcus opacus B4]
          Length = 142

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---D 279
           + + G ++  V     +   I  L+    G + VV E   + GI+TE D+ R  H+   D
Sbjct: 7   LRNKGPAVVTVDPEMSVSTLIGELARHNVGAL-VVTENDAVVGIVTERDVVRRIHERGPD 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    V D+M  +    L    +    + + +  I  L V+    + +GIV   D+++  
Sbjct: 66  ILNARVVDIMTTSVFACLPTDTVDSLAETMTERRIRHLPVI-VDGQLVGIVSIGDVVKSR 124

Query: 340 I 340
           I
Sbjct: 125 I 125


>gi|117923950|ref|YP_864567.1| CBS domain-containing protein [Magnetococcus sp. MC-1]
 gi|117607706|gb|ABK43161.1| CBS domain containing membrane protein [Magnetococcus sp. MC-1]
          Length = 150

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 31/144 (21%), Positives = 53/144 (36%), Gaps = 25/144 (17%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF- 276
           +   DVM +            L    + +   +   + VV+EG +L GI++E DI     
Sbjct: 1   MRVKDVMTTHVRTARRHDD--LKSVASQICALKVSGLPVVEEGGRLVGIVSEKDILNALL 58

Query: 277 ----------------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                                 + ++   SVE+VMI +      +  +  A   +   + 
Sbjct: 59  PSYSDYLADPVKGNDFEAMEATYPEVMGRSVEEVMIASVMTCNPEDPVLDAASRMTSRHF 118

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
             L VVDD Q  +GIV   D+ + 
Sbjct: 119 RRLPVVDDKQLLVGIVSLSDIHQA 142



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                P++DA + ++ + F  + VVD+ Q L GI++  DI +   K    L
Sbjct: 100 CNPEDPVLDAASRMTSRHFRRLPVVDDKQLLVGIVSLSDIHQAIFKKTFAL 150


>gi|224061667|ref|XP_002300594.1| Cl-channel clc-3 [Populus trichocarpa]
 gi|222847852|gb|EEE85399.1| Cl-channel clc-3 [Populus trichocarpa]
          Length = 568

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 29/129 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------------DL 280
           V +   L +AI  + + +  C+ VVD+   L+GI+T GDI R                D+
Sbjct: 407 VSLSLTLKEAIKYMHDCKQNCLLVVDDEDLLEGILTYGDIRRLSKTSSDASTGDSTIIDV 466

Query: 281 NTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ------- 324
           NT  V  V           +       DT L +A  L+    I  L VV           
Sbjct: 467 NTCLVSTVCTREIRYRGQVRGLLTCYPDTDLAIAKDLMEAKGIKQLPVVKRSGGSQKDWK 526

Query: 325 -KAIGIVHF 332
            + + I+H+
Sbjct: 527 RRVVAILHY 535



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 274 RNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              ++DL    L V   M KN   +     L  A++ +     + L+VVDD     GI+ 
Sbjct: 383 EAINEDLLAENLKVSKAMSKNYAKVSLSLTLKEAIKYMHDCKQNCLLVVDDEDLLEGILT 442

Query: 332 FLDLLRF 338
           + D+ R 
Sbjct: 443 YGDIRRL 449


>gi|200390890|ref|ZP_03217501.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|199603335|gb|EDZ01881.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
          Length = 289

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +    L  +  SL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 97  KIFESAMASLDHVRQSLDKS---AVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              + DD+++++S +G +  L  +   AR     +IA+TS  
Sbjct: 153 FNVPVIYSDDIVLQRMSCMNCSDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTS-A 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +A  A + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 212 GTPLAREATLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|16765229|ref|NP_460844.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhimurium str. LT2]
 gi|56413194|ref|YP_150269.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. ATCC 9150]
 gi|161613559|ref|YP_001587524.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Paratyphi B str. SPB7]
 gi|167552479|ref|ZP_02346232.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|167993865|ref|ZP_02574958.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168259840|ref|ZP_02681813.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|197264433|ref|ZP_03164507.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197362120|ref|YP_002141757.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Paratyphi A str. AKU_12601]
 gi|198244289|ref|YP_002215199.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Dublin str. CT_02021853]
 gi|207856592|ref|YP_002243243.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Enteritidis str. P125109]
 gi|224583610|ref|YP_002637408.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Paratyphi C strain RKS4594]
 gi|16420423|gb|AAL20803.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|56127451|gb|AAV76957.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|161362923|gb|ABX66691.1| hypothetical protein SPAB_01279 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197093597|emb|CAR59060.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|197242688|gb|EDY25308.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197938805|gb|ACH76138.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|205322917|gb|EDZ10756.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205328202|gb|EDZ14966.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205350540|gb|EDZ37171.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708395|emb|CAR32699.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|224468137|gb|ACN45967.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|261247058|emb|CBG24877.1| putative transcriptional repressor [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267993868|gb|ACY88753.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 14028S]
 gi|301158408|emb|CBW17915.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Typhimurium str. SL1344]
 gi|312912881|dbj|BAJ36855.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhimurium str. T000240]
 gi|321224530|gb|EFX49593.1| Phosphogluconate repressor HexR, RpiR family [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|323130171|gb|ADX17601.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhimurium str. 4/74]
 gi|326622948|gb|EGE29293.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Dublin str. 3246]
 gi|332988781|gb|AEF07764.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhimurium str. UK-1]
          Length = 289

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +    L  +  SL        + AV+ +   K ++   G+G S  +     +    
Sbjct: 97  KIFESAMASLDHVRQSLDKS---AVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              + DD+++++S +G +  L  +   AR     +IA+TS  
Sbjct: 153 FNVPVIYSDDIVLQRMSCMNCSDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTS-A 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +A  A + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 212 GTPLAREATLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|84393002|ref|ZP_00991769.1| hypothetical protein V12B01_03818 [Vibrio splendidus 12B01]
 gi|84376356|gb|EAP93237.1| hypothetical protein V12B01_03818 [Vibrio splendidus 12B01]
          Length = 629

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDL 280
           P+++    +  A T+++E     + ++D         +   + GIIT+ D+  R   + L
Sbjct: 161 PMIEKTRTIQQAATMMAEDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  V  VM      +  +  +  AM  + ++N+  L V+   +K IGI+   D++R+
Sbjct: 221 DPSDEVSSVMTPEVISLDHNAYVYEAMMTMLRYNVHHLPVL-KDKKPIGIIEATDIVRY 278


>gi|75762120|ref|ZP_00742023.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228899408|ref|ZP_04063665.1| CBS domain protein [Bacillus thuringiensis IBL 4222]
 gi|228906478|ref|ZP_04070354.1| CBS domain protein [Bacillus thuringiensis IBL 200]
 gi|74490401|gb|EAO53714.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|228853027|gb|EEM97805.1| CBS domain protein [Bacillus thuringiensis IBL 200]
 gi|228860165|gb|EEN04568.1| CBS domain protein [Bacillus thuringiensis IBL 4222]
          Length = 112

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
           + E+  G + VV E +++ G++T+ D+       K   +  + +VM  N   +  +  + 
Sbjct: 1   MKEESVGLIPVV-ENEQVVGLVTDRDLVVRGIAEKHPGSNKITNVMTTNIISVSPNDSIE 59

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            A +L+ Q+ I  L VVD   + IG++   DL
Sbjct: 60  KATELMAQYQIRRLPVVD-SGQLIGMLALGDL 90


>gi|315051710|ref|XP_003175229.1| inosine-5'-monophosphate dehydrogenase [Arthroderma gypseum CBS
           118893]
 gi|311340544|gb|EFQ99746.1| inosine-5'-monophosphate dehydrogenase [Arthroderma gypseum CBS
           118893]
          Length = 551

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 46/229 (20%), Positives = 81/229 (35%), Gaps = 27/229 (11%)

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVA-----CHADIVLTLPKEPESCPHGLAP 175
           SG   ++K +L   +R      A+T  +  V+        +D+ L  P       +   P
Sbjct: 39  SGDGLDIKELLDSNKRG-----ALTYNDFLVLPGYIGFPASDVTLQSPVTKRISLN--VP 91

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIP 231
             S+ M      ++AI +            V+H              V            
Sbjct: 92  LLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSAEEQAEMVRKVKRYENGFILDPV 146

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++     + +   +  +  FG   V + G    KL GI+T  DI   FH +L+   V  V
Sbjct: 147 VISPKTTVAEVKELKQKWGFGGFPVTENGDLRSKLVGIVTSRDI--QFHPELSD-PVTAV 203

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +       T L  A ++LR      L +VD+    + ++   DL++
Sbjct: 204 MTTDLVTAPAGTTLAEANEVLRASKKGKLPIVDEAGNIVSLLSRSDLMK 252


>gi|256819607|ref|YP_003140886.1| CBS domain containing membrane protein [Capnocytophaga ochracea DSM
           7271]
 gi|256581190|gb|ACU92325.1| CBS domain containing membrane protein [Capnocytophaga ochracea DSM
           7271]
          Length = 138

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 27/135 (20%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             +  +     L +A  +  +     + VV EG KL GI++  D+ R 
Sbjct: 1   MKQRVPVSQIMSKELVTLTPTQSLYEAERLFKKHNIRHIPVV-EGDKLIGIVSYSDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              D+               ++  +M K P  +  DT +    ++L   +   + VVD+ 
Sbjct: 60  SFADMTDGEEEVTSVVYDMYTIPQIMAKTPLTVSADTSIKEVAEILADQSFHSIPVVDN- 118

Query: 324 QKAIGIVHFLDLLRF 338
            K +G+V   DL+++
Sbjct: 119 GKLVGLVTTTDLIKY 133



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +   IL+++ F  + VVD   KL G++T  D+ +  
Sbjct: 92  VSADTSIKEVAEILADQSFHSIPVVD-NGKLVGLVTTTDLIKYL 134


>gi|123441531|ref|YP_001005517.1| rpiR family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|332162538|ref|YP_004299115.1| rpiR family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|122088492|emb|CAL11285.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. enterocolitica 8081]
 gi|318606625|emb|CBY28123.1| sialic acid utilization regulator, RpiR family [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325666768|gb|ADZ43412.1| rpiR family transcriptional regulatory protein [Yersinia
           enterocolitica subsp. palearctica 105.5R(r)]
 gi|330860783|emb|CBX71071.1| uncharacterized HTH-type transcriptional regulator HI0143 [Yersinia
           enterocolitica W22703]
          Length = 292

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG     
Sbjct: 110 NKLQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A++     
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMRPGDVAIGISHSGTSAETVHALKLAKQAGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 220 VALTHNMGSTITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|145596077|ref|YP_001160374.1| CBS domain-containing protein [Salinispora tropica CNB-440]
 gi|145305414|gb|ABP55996.1| CBS domain containing protein [Salinispora tropica CNB-440]
          Length = 138

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMIKN 292
              LI A   + +   G V V D    + GI+T+ DI  R   +++N  +  + ++  ++
Sbjct: 18  NDTLIAAAQEMRDCAIGDVVVTDGEN-VVGIVTDRDIAVRAVAENMNPASTRLNEITTRD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +      A  L+R + +  L VV +  + IG+V   DL
Sbjct: 77  VITVSQYDDAVAAADLMRTYAVRRLPVV-EDGQLIGLVSMGDL 118



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 22/53 (41%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +V + M      +  +  L  A Q +R   I  ++V D     +GIV   D+
Sbjct: 2   TTVGEFMTTRLVTMDGNDTLIAAAQEMRDCAIGDVVVTDGEN-VVGIVTDRDI 53


>gi|85059247|ref|YP_454949.1| DNA-binding transcriptional regulator HexR [Sodalis glossinidius
           str. 'morsitans']
 gi|84779767|dbj|BAE74544.1| hex regulon repressor [Sodalis glossinidius str. 'morsitans']
          Length = 285

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 74/203 (36%), Gaps = 6/203 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +H   S          ++ ++ +V      I   +  ++SLE           + AV+ +
Sbjct: 68  LHLAQSLANWTLYVNRNVDEDDSVDSYTHKIF--ESAMASLEQVKNSLDIAAVNRAVDLL 125

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K ++   G+G S  +     +       P  +              +  D+++++S 
Sbjct: 126 TQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVVYSEDIVLQRMSCMNSSEGDVVVLISH 184

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G +  L  +    R     +IAITS  +S +A  A + L L    ++      P TS +
Sbjct: 185 TGRTKILVELSALVRENDATVIAITS-PRSPLALEASLTLELDVPKDTNMF--MPMTSRL 241

Query: 181 MQLAIGDALAIALLESRNFSEND 203
            QL + D LA      R     D
Sbjct: 242 AQLTVIDVLATGFTLRRGAKFRD 264


>gi|315195609|gb|EFU25996.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
           CGS00]
          Length = 432

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 20/216 (9%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           ELK IL Y        + I    +      +     I++T   +P +     A      +
Sbjct: 104 ELKDILKYI---GPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVIDFANEHDLPV 160

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             +  D   +A + ++        + +   K+    +   D+M   D + ++     + D
Sbjct: 161 LSSSYDTFLVANIINK-------ALFNQ--KIRKDILIVQDIMTPLDDLSVLFDTMKIAD 211

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
              + ++       VV+E  KL GI+T     R      +   ++ VM +NP  +   + 
Sbjct: 212 YKRMANQTGHTRFPVVNESYKLVGIVT----SREMINTKDDDEIDKVMTRNPIYVNAMST 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     ++    I ++ VV   +K +G+++  D+L+
Sbjct: 268 VASCAHMMIWEGIELIPVVSSNKKTVGVINRQDVLK 303


>gi|332296659|ref|YP_004438582.1| Cl- channel voltage-gated family protein [Thermodesulfobium
           narugense DSM 14796]
 gi|332179762|gb|AEE15451.1| Cl- channel voltage-gated family protein [Thermodesulfobium
           narugense DSM 14796]
          Length = 612

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 51/119 (42%), Gaps = 3/119 (2%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            +  +            + +   I+++  +  + + D    L G+IT+ D+++  + D N
Sbjct: 480 KIKEAMQKPLTASPDLKISEIEEIMTKNIYTGIPITD-NGFLVGMITKTDLWKARNLDKN 538

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLRF 338
            +   D+M KN   +  D  L   M+++    I  + +V D    + +GI+   D+ R 
Sbjct: 539 KVLARDIMTKNLITLTPDDSLYDFMKIIVSKGIGRVPIVKDKTSNELVGIITRSDIGRI 597



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 2/47 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKD 279
               L D + I+  K  G V +V +    +L GIIT  DI R   ++
Sbjct: 555 PDDSLYDFMKIIVSKGIGRVPIVKDKTSNELVGIITRSDIGRIMREE 601


>gi|327439232|dbj|BAK15597.1| predicted transcriptional regulator containing CBS domains
           [Solibacillus silvestris StLB046]
          Length = 435

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    +   DV    +   ++K    + D          G   VV    +L G+IT  
Sbjct: 182 QLIKKDILLIEDVYVPMEDTAVLKNNDTIADFHRQNRRTTHGAFPVVTGQNRLVGMITSK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+         +  ++ VM KNP      T +  A   +    I +L V+D+     G++
Sbjct: 242 DVI----GKEESEPIDKVMTKNPIAASMKTSVASAGHRMIWEGIDLLPVIDEEGLLKGVI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|305663917|ref|YP_003860205.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
 gi|304378486|gb|ADM28325.1| putative signal transduction protein with CBS domains [Ignisphaera
           aggregans DSM 17230]
          Length = 134

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 32/116 (27%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNT 282
              +   ++    + DAI ++       + V DE   + G+IT  DI  R   K  D+ T
Sbjct: 8   MVPNPIQIRALATVYDAIKLMERHNIASLIVTDENDVVLGVITAKDIVIRVLAKGLDIKT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + +++ K   V+  DTLL   + ++       + VV+   KAIGIV   D+L+F
Sbjct: 68  TKIIEIVSKPVTVVEPDTLLKDVVNMMIGTGHGHIPVVNKAGKAIGIVTIDDILKF 123



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L   DVM+ NP  I     +  A++L+ +HNI+ L+V D+    +G++   D++
Sbjct: 2   LKASDVMVPNPIQIRALATVYDAIKLMERHNIASLIVTDENDVVLGVITAKDIV 55



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 29/73 (39%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G        +      + +V+    L D + ++     G + VV++  K  GI+T  DI 
Sbjct: 62  GLDIKTTKIIEIVSKPVTVVEPDTLLKDVVNMMIGTGHGHIPVVNKAGKAIGIVTIDDIL 121

Query: 274 RNFHKDLNTLSVE 286
           +   + L    ++
Sbjct: 122 KFVPELLELAEIK 134


>gi|269103015|ref|ZP_06155712.1| sialic acid utilization regulator RpiR family [Photobacterium
           damselae subsp. damselae CIP 102761]
 gi|268162913|gb|EEZ41409.1| sialic acid utilization regulator RpiR family [Photobacterium
           damselae subsp. damselae CIP 102761]
          Length = 291

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 57/156 (36%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L            + +++  G V   G+G SG       + L   G     +    
Sbjct: 121 LGETLNLLNFDTLAKVAKLLRSSHG-VYFFGVGSSGITAEDAKNKLMRIGFNVDALTNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   DL I +S SG+S E    L  A+      +A+T   +S +A +AD VL
Sbjct: 180 FMYMKASLLHPGDLAIGISHSGNSLETTKALKLAKEAGATTVALTHNPRSSIAEYADYVL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            + I QL + D +   L++ 
Sbjct: 240 VNGNRQGKLQGDSI--GTKISQLFVLDLIYALLVQE 273


>gi|209693723|ref|YP_002261651.1| putative cyclic nucleotide binding protein [Aliivibrio salmonicida
           LFI1238]
 gi|208007674|emb|CAQ77785.1| putative cyclic nucleotide binding protein [Aliivibrio salmonicida
           LFI1238]
          Length = 626

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 238 PLIDAITILSEKRFGCVAVVD-------EGQKLKGIITEGDI-FRNFHKDLN-TLSVEDV 288
            +  A   ++E+    V + D       E     GIIT+ D+  +     L+    V +V
Sbjct: 169 TIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGIITDRDLCTKVLACGLDFDTPVSEV 228

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M      +  +  +  AM ++ ++N+  L V+   ++ IG++   D++R+
Sbjct: 229 MSTELISLDHNAYVFEAMLMMLRYNVHHLPVL-RNKQPIGVLEVSDIVRY 277



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 30/66 (45%), Gaps = 7/66 (10%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-------DCQKAIGI 329
             DL T  V+ ++ +   +I +   +  A + + + N+S +++ D       +    +GI
Sbjct: 145 ANDLTTSKVKTLLTREAVMITKYETIQSAAKTMAEENVSAVLITDPEINTDEEDNDFVGI 204

Query: 330 VHFLDL 335
           +   DL
Sbjct: 205 ITDRDL 210


>gi|220908950|ref|YP_002484261.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
 gi|219865561|gb|ACL45900.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7425]
          Length = 1432

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 6/116 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLS 284
             S  +V      ++ I  +        A++  G +L GI T  D+ +      DL   S
Sbjct: 18  NYSPLVVSPETSALEVIGSM--HPSHSCALIMAGGQLSGIFTSQDVVKATATCIDLAATS 75

Query: 285 VEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +VM +    +   E+  +  A+  + +  +  L ++D   + +GI+    LL+ 
Sbjct: 76  IAEVMTQPVVTVTWSEELTIQRALSRMAEQQVHHLPILDAEHQLLGIITQEQLLQA 131



 Score = 39.1 bits (90), Expect = 0.93,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 47/117 (40%), Gaps = 5/117 (4%)

Query: 167 ESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
              P  ++P TSA+  +     + + AL+ +       F          T    A+  + 
Sbjct: 18  NYSPLVVSPETSALEVIGSMHPSHSCALIMAGGQLSGIFTSQDVVKATATCIDLAATSIA 77

Query: 226 SGDSIPLV----KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              + P+V         +  A++ ++E++   + ++D   +L GIIT+  + +   +
Sbjct: 78  EVMTQPVVTVTWSEELTIQRALSRMAEQQVHHLPILDAEHQLLGIITQEQLLQAIGR 134


>gi|49483946|ref|YP_041170.1| DNA-binding protein [Staphylococcus aureus subsp. aureus MRSA252]
 gi|257425819|ref|ZP_05602243.1| DRTGG domain-containing protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257428485|ref|ZP_05604883.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257431119|ref|ZP_05607496.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257433801|ref|ZP_05610159.1| DNA-binding protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257436718|ref|ZP_05612762.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282904275|ref|ZP_06312163.1| CBS domain protein [Staphylococcus aureus subsp. aureus C160]
 gi|282906100|ref|ZP_06313955.1| thioesterase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282909015|ref|ZP_06316833.1| thioesterase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282911331|ref|ZP_06319133.1| thioesterase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282914500|ref|ZP_06322286.1| CBS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282919468|ref|ZP_06327203.1| DNA-binding protein [Staphylococcus aureus subsp. aureus C427]
 gi|282924846|ref|ZP_06332512.1| DNA-binding protein [Staphylococcus aureus subsp. aureus C101]
 gi|283958455|ref|ZP_06375906.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293503578|ref|ZP_06667425.1| DNA-binding protein [Staphylococcus aureus subsp. aureus 58-424]
 gi|293510594|ref|ZP_06669299.1| thioesterase [Staphylococcus aureus subsp. aureus M809]
 gi|293537135|ref|ZP_06671815.1| CBS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|295428275|ref|ZP_06820904.1| DNA-binding protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297590762|ref|ZP_06949400.1| CBS domain protein [Staphylococcus aureus subsp. aureus MN8]
 gi|49242075|emb|CAG40774.1| putative DNA-binding protein [Staphylococcus aureus subsp. aureus
           MRSA252]
 gi|257271513|gb|EEV03659.1| DRTGG domain-containing protein [Staphylococcus aureus subsp.
           aureus 55/2053]
 gi|257275326|gb|EEV06813.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           65-1322]
 gi|257278067|gb|EEV08715.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           68-397]
 gi|257281894|gb|EEV12031.1| DNA-binding protein [Staphylococcus aureus subsp. aureus E1410]
 gi|257284069|gb|EEV14192.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           M876]
 gi|282313212|gb|EFB43608.1| DNA-binding protein [Staphylococcus aureus subsp. aureus C101]
 gi|282317278|gb|EFB47652.1| DNA-binding protein [Staphylococcus aureus subsp. aureus C427]
 gi|282321681|gb|EFB52006.1| CBS domain protein [Staphylococcus aureus subsp. aureus M899]
 gi|282325026|gb|EFB55336.1| thioesterase [Staphylococcus aureus subsp. aureus WBG10049]
 gi|282327279|gb|EFB57574.1| thioesterase [Staphylococcus aureus subsp. aureus WW2703/97]
 gi|282331392|gb|EFB60906.1| thioesterase [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595893|gb|EFC00857.1| CBS domain protein [Staphylococcus aureus subsp. aureus C160]
 gi|283470971|emb|CAQ50182.1| CBS domain protein [Staphylococcus aureus subsp. aureus ST398]
 gi|283790604|gb|EFC29421.1| CBS domain-containing protein [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290919980|gb|EFD97048.1| CBS domain protein [Staphylococcus aureus subsp. aureus M1015]
 gi|291095244|gb|EFE25509.1| DNA-binding protein [Staphylococcus aureus subsp. aureus 58-424]
 gi|291466485|gb|EFF09006.1| thioesterase [Staphylococcus aureus subsp. aureus M809]
 gi|295127675|gb|EFG57312.1| DNA-binding protein [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297575648|gb|EFH94364.1| CBS domain protein [Staphylococcus aureus subsp. aureus MN8]
 gi|312437838|gb|ADQ76909.1| CBS domain protein [Staphylococcus aureus subsp. aureus TCH60]
          Length = 432

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 38/216 (17%), Positives = 83/216 (38%), Gaps = 20/216 (9%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           ELK IL Y        + I    +      +     I++T   +P +     A      +
Sbjct: 104 ELKDILKYI---GPKTLLIVGNREDVQIEALKRGTAILITGGFKPSNKVIDFANEHDLPV 160

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             +  D   +A + ++        + +   K+    +   D+M   D + ++     + D
Sbjct: 161 LSSSYDTFLVANIINK-------ALFNQ--KIRKDILIVQDIMTPLDDLSVLFDTMKIAD 211

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
              + ++       VV+E  KL GI+T     R      +   ++ VM +NP  +   + 
Sbjct: 212 YKRMANQTGHTRFPVVNESYKLVGIVT----SREMINTKDDDEIDKVMTRNPIYVNAMST 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     ++    I ++ VV   +K +G+++  D+L+
Sbjct: 268 VASCAHMMIWEGIELIPVVSSNKKTVGVINRQDVLK 303


>gi|115523751|ref|YP_780662.1| CBS domain-containing protein [Rhodopseudomonas palustris BisA53]
 gi|115517698|gb|ABJ05682.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           BisA53]
          Length = 129

 Score = 72.6 bits (177), Expect = 7e-11,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------KDLNT 282
           V+    + +   + +   +    V +E  ++ G++T+ D  + F            +L  
Sbjct: 8   VRRDMTMRELQELFNRDDYNAYPV-EEDGQVIGLVTKYDYLKCFAFAPVHMVPHYDELMN 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V DVM  +   +  +  LT  +QL+  H    + VVD+ +K +GI+   D++  
Sbjct: 67  RTVGDVMSPDFIYVHPEIKLTRVLQLMVDHQTRSIPVVDNDRKLMGIISREDVMHA 122



 Score = 39.1 bits (90), Expect = 1.00,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  +H       L       + S D I  V     L   + ++ + +   + VVD  +KL
Sbjct: 52  FAPVHMVPHYDELMNRTVGDVMSPDFIY-VHPEIKLTRVLQLMVDHQTRSIPVVDNDRKL 110

Query: 264 KGIITEGDIFRNF 276
            GII+  D+    
Sbjct: 111 MGIISREDVMHAL 123


>gi|330685889|gb|EGG97518.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU121]
          Length = 183

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/174 (22%), Positives = 72/174 (41%), Gaps = 9/174 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+ +L      +F     ++     R+ + G G+SG + +  A  L   G  +F + 
Sbjct: 12  LDELKGTLSHVKDEEFDGFASEVTEAS-RIFVAGKGRSGFVANSFAMRLNQLGKQAFVIG 70

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         I + DL IV+S SGS++ L+ +   A+     ++ +T++  S +   AD
Sbjct: 71  ESTTP-----SIQKGDLFIVISGSGSTEHLRLLADKAKSVEAEVVLLTTKLDSAIGEIAD 125

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            V+ LP   +    G   P  S   Q      D++ I L+   +  E      H
Sbjct: 126 TVVELPAGTKHDATGSDQPLGSLFEQSSQIFLDSVVIGLMAQLDVDETTMQNNH 179


>gi|262274440|ref|ZP_06052251.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Grimontia hollisae CIP 101886]
 gi|262221003|gb|EEY72317.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Grimontia hollisae CIP 101886]
          Length = 284

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K ++   G+G S  +     +       P    +            T 
Sbjct: 117 QINRAVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFNDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++V+S +G +  L  +   A+     +I IT E  S +     + +TL    ++  +
Sbjct: 176 GDVVVVISHTGRTKSLVDVATLAKENGATVIGIT-EKGSPLDKVCSLTITLDVPEDTDIY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|114330996|ref|YP_747218.1| signal transduction protein [Nitrosomonas eutropha C91]
 gi|114308010|gb|ABI59253.1| putative signal transduction protein with CBS domains [Nitrosomonas
           eutropha C91]
          Length = 127

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
                  +     +  A+ I+ E     + V+D G KL G++++ D+   R+   D+   
Sbjct: 8   MTPMPQTIGFDISVEKALEIMKECACHHLPVLD-GGKLVGVLSDRDLSMARHDSNDVKAE 66

Query: 284 S-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V+D+M   P VI     +  A++ +  + I+ L+V  +  +  GI+   DLLR
Sbjct: 67  HLVKDLMSDAPIVIEPSAEINTAIRTMLDNKINSLIVRVEGNQPWGILTSTDLLR 121



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V D+M   P+ I  D  +  A++++++     L V+D   K +G++   DL
Sbjct: 2   TQVRDLMTPMPQTIGFDISVEKALEIMKECACHHLPVLD-GGKLVGVLSDRDL 53


>gi|315180527|gb|ADT87441.1| DNA-binding transcriptional regulator HexR [Vibrio furnissii NCTC
           11218]
          Length = 284

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPIACFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   A + + L    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKAASLSICLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|238764761|ref|ZP_04625704.1| RpiR-family transcriptional regulator [Yersinia kristensenii ATCC
           33638]
 gi|238697052|gb|EEP89826.1| RpiR-family transcriptional regulator [Yersinia kristensenii ATCC
           33638]
          Length = 292

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG     
Sbjct: 110 NKLQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A++     
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMRPGDVAIGISHSGTSAETVHALKLAKQAGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 220 VALTHNMGSTITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|168178495|ref|ZP_02613159.1| CBS domain protein [Clostridium botulinum NCTC 2916]
 gi|182671110|gb|EDT83084.1| CBS domain protein [Clostridium botulinum NCTC 2916]
          Length = 126

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               + ++     +  A+ +++E       V DE   L G+I + DI+R        +T 
Sbjct: 6   MNTHVIVLNPKDSIKKALDLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM K      E+  +    + +   +I  + +VD  +K +GIV   D+L+
Sbjct: 66  PVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDSSKKLLGIVSVEDILK 119



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M  +  V+     +  A+ L+ ++NI+   V D+    IG++   D+ RF
Sbjct: 4   DIMNTHVIVLNPKDSIKKALDLMNENNINGAPVADEEGNLIGMIVKADIYRF 55


>gi|37521628|ref|NP_925005.1| two-component sensor histidine kinase [Gloeobacter violaceus PCC
           7421]
 gi|35212626|dbj|BAC90000.1| two-component sensor histidine kinase [Gloeobacter violaceus PCC
           7421]
          Length = 682

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 4/82 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILED--TLLTVAMQLL 309
             +V EG  L GIITEGDI R     KDL  +   +VM+     +++D    +  A+ L+
Sbjct: 66  CVLVAEGAHLVGIITEGDIVRLTALGKDLAAVRAGEVMLGGVVTLVQDGRQDILGALDLM 125

Query: 310 RQHNISVLMVVDDCQKAIGIVH 331
           R+HN+  L V+DD  +  G++ 
Sbjct: 126 RRHNVRHLPVLDDGGRVTGLLS 147



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 47/104 (45%), Gaps = 7/104 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILED 299
           A+ ++       + V+D+G ++ G+++ G I R       L   SV +VM          
Sbjct: 121 ALDLMRRHNVRHLPVLDDGGRVTGLLSAGGIRRTLQPIHLLTLRSVAEVMTTPVVHAPAG 180

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQ-----KAIGIVHFLDLLRF 338
           +LL    +L+    +S +++ +        + +G++   D+++F
Sbjct: 181 SLLVNLARLMAGRRVSCVVIAEPHTDGVHVRPVGLITESDIVQF 224


>gi|324112174|gb|EGC06152.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia fergusonii B253]
          Length = 296

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       K R +  G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQAKQRDLY-GAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DIQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  +D ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLSDYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|303242637|ref|ZP_07329112.1| CBS domain containing membrane protein [Acetivibrio cellulolyticus
           CD2]
 gi|302589845|gb|EFL59618.1| CBS domain containing membrane protein [Acetivibrio cellulolyticus
           CD2]
          Length = 149

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 62/133 (46%), Gaps = 28/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           +K    + +   +LSEK    V V+D+  K+ G+++E D+                    
Sbjct: 14  IKKDTTVEEIAHLLSEKNISGVPVLDDSSKVIGMVSEKDLLYKDIEPHFPPVVEILGGLI 73

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                + ++++L  L     E++M K    I  DT +    +L+ + +I+ + VVD+ QK
Sbjct: 74  FLKSVKQYNEELRKLVATRAEEIMTKKVVTIGPDTEVERIAELMIEKDINRIPVVDN-QK 132

Query: 326 AIGIVHFLDLLRF 338
            +GI+   D++++
Sbjct: 133 LVGIISRADVIKY 145



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M  +   I +DT +     LL + NIS + V+DD  K IG+V   DLL
Sbjct: 1   MKARDIMSTDVIAIKKDTTVEEIAHLLSEKNISGVPVLDDSSKVIGMVSEKDLL 54


>gi|209522604|ref|ZP_03271170.1| putative signal-transduction protein with CBS domains [Burkholderia
           sp. H160]
 gi|209496960|gb|EDZ97249.1| putative signal-transduction protein with CBS domains [Burkholderia
           sp. H160]
          Length = 165

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 53/135 (39%), Gaps = 6/135 (4%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGI 266
            G++       +        + + +    +++A  ++  +  G + VV+         G+
Sbjct: 7   AGRVERGASIVNTGSICTRDVAVCERQATVLEAAELMRAQHVGDLVVVETSGGRRVPVGM 66

Query: 267 ITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +T+ DI         +   + V DVM   P ++ E   L +A   +R H +  L VVD  
Sbjct: 67  LTDRDIVLAIVAKQANPEKIFVNDVMSSPPALVDEGDDLWLAASRMRLHGVRRLPVVDAA 126

Query: 324 QKAIGIVHFLDLLRF 338
               GIV   DL + 
Sbjct: 127 GVLAGIVSLDDLFQA 141


>gi|167565691|ref|ZP_02358607.1| HPP family protein [Burkholderia oklahomensis EO147]
          Length = 391

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 33/66 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  D+M +    I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 235 LRAYARTFDELSCADIMTRPAISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTR 294

Query: 333 LDLLRF 338
            DL R 
Sbjct: 295 ADLSRA 300



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ R          + L+    
Sbjct: 258 IAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTRADLSRAAPYATPGLLRSLSARLP 317

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD  Q+  GIV   DL
Sbjct: 318 RSLVGPAFVARAVMSARVHTVRTTTPIAELVPLFADHGHHHIPVVDADQRLAGIVTQADL 377

Query: 336 LRFGI 340
           +  G+
Sbjct: 378 I-AGL 381



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 26/53 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V+   P+ + + + ++     + VVD  Q+L GI+T+ D+    ++
Sbjct: 331 MSARVHTVRTTTPIAELVPLFADHGHHHIPVVDADQRLAGIVTQADLIAGLYR 383


>gi|297620160|ref|YP_003708265.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297379137|gb|ADI37292.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 320

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     +    +++ + +     VV+  ++L GI+T  D+       L    +
Sbjct: 58  MSSRVVTVNENDSVDFLNSVIRKHKHLGYPVVNSNKELVGIVTFNDLENKGI--LGKNKI 115

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D+M K  +  +I  D     A +L+ +H +  L+V+DD    +GIV   D+L+
Sbjct: 116 KDIMTKAKDLIIIKCDESALAAQKLMIKHKVGRLIVLDDENNILGIVSKTDILK 169



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 5/77 (6%)

Query: 268 TEGDIFRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQ 324
           +E D+ + +  K L  LSV  +M      + E+  +     ++R+H    L   VV+  +
Sbjct: 36  SESDLIKLYDLKILTKLSVSQIMSSRVVTVNENDSVDFLNSVIRKHK--HLGYPVVNSNK 93

Query: 325 KAIGIVHFLDLLRFGII 341
           + +GIV F DL   GI+
Sbjct: 94  ELVGIVTFNDLENKGIL 110


>gi|108803646|ref|YP_643583.1| signal transduction protein [Rubrobacter xylanophilus DSM 9941]
 gi|108764889|gb|ABG03771.1| putative signal transduction protein with CBS domains [Rubrobacter
           xylanophilus DSM 9941]
          Length = 160

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 28/134 (20%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--------------------- 273
               +  AI + +E       V+ E  +L GI+TEGD+                      
Sbjct: 24  PEDTVERAIRLFAESHISGAPVL-EDGRLVGIVTEGDLIFRDAEIKAPGFLDILGGIIPL 82

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 R        ++V +VM ++   +   T L  A   + +  I +L VV+  +   
Sbjct: 83  GSWEEYREETLKSAGVTVGEVMTRDVVTVSPQTPLPEAATAMARRRIKLLPVVEGERLLR 142

Query: 328 GIVHFLDLLRFGII 341
           G++  +D+L   +I
Sbjct: 143 GVISRMDILALHVI 156



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+  L+V DVM  +   +  +  +  A++L  + +IS   V+ +  + +GIV   DL+
Sbjct: 3   QQDIRRLTVGDVMHADWPTLGPEDTVERAIRLFAESHISGAPVL-EDGRLVGIVTEGDLI 61



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
               +  V    PL +A T ++ +R   + VV+  + L+G+I+  DI 
Sbjct: 104 MTRDVVTVSPQTPLPEAATAMARRRIKLLPVVEGERLLRGVISRMDIL 151


>gi|238785231|ref|ZP_04629222.1| RpiR-family transcriptional regulator [Yersinia bercovieri ATCC
           43970]
 gi|238713826|gb|EEQ05847.1| RpiR-family transcriptional regulator [Yersinia bercovieri ATCC
           43970]
          Length = 292

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/175 (21%), Positives = 67/175 (38%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           + +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG     
Sbjct: 110 NKLQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A++     
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMRPGDVAIGISHSGTSAETVHALKLAKQAGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 220 VALTHNMGSTITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|226501000|ref|NP_001145716.1| hypothetical protein LOC100279220 [Zea mays]
 gi|219884141|gb|ACL52445.1| unknown [Zea mays]
          Length = 551

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVM 289
           V     +++    ++ +R     + D    L GI+T+ DI  R   ++L  +   V  VM
Sbjct: 61  VPESTTVLEVCRRMAARRADAALLTDSNALLCGILTDKDIATRVIARELKIDETPVWKVM 120

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++P  +L DTL   A+Q + Q     L V D+ +    +V  LD+ +
Sbjct: 121 TRHPIFVLSDTLAVEALQKMVQGKFRHLPVADNGE----VVAMLDIAK 164



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 4/111 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRN 275
             C S ++    ++ +V  G  ++ A   + E       VV  G K +GI+T  D + R 
Sbjct: 206 RPCLSAIIGEDSTVVMVSPGDSVLAATKRMVEAHATSA-VVAVGSKPQGILTSRDILMRL 264

Query: 276 FHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
             K+L  +   VE VM  +P+    D  +  A++ +++     L V+D   
Sbjct: 265 VAKNLSADATPVEKVMTPDPEFATVDMPILDALRTMQERKFLHLPVMDRDG 315


>gi|333026238|ref|ZP_08454302.1| putative RpiR-family transcriptional regulator [Streptomyces sp.
           Tu6071]
 gi|332746090|gb|EGJ76531.1| putative RpiR-family transcriptional regulator [Streptomyces sp.
           Tu6071]
          Length = 358

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   ++L          AV  +   + R+ I G+G S  +   L   L   G  +
Sbjct: 171 ERQTLADTAANLDT---AALGAAVTALAQAR-RIDIYGVGASHLVAQDLGQKLLRIGLFA 226

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ + ++ SGS+ ++   L  A       IAIT       A
Sbjct: 227 QAHADPHLAITNAVQLRGKDVAVAITHSGSTSDVVEPLRAAFERGATTIAITGRPDGSAA 286

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT            A  +S   Q  + D L + + + 
Sbjct: 287 QYADHVLTT-VAARESELRPAAMSSRASQHLVVDCLFVGVAQR 328


>gi|332982374|ref|YP_004463815.1| RpiR family transcriptional regulator [Mahella australiensis 50-1
           BON]
 gi|332700052|gb|AEE96993.1| transcriptional regulator, RpiR family [Mahella australiensis 50-1
           BON]
          Length = 293

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 1/126 (0%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            + +L  +L      Q+  AVE +   + ++++ G G +  +           G      
Sbjct: 116 SIQALTDTLNVLDKKQYGLAVEALCNAQ-KIMLCGTGDAAAVAQSGYQKFYRAGLNVHVS 174

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
              +        + R D+ I +S SG +  +     YA+     +I IT+   S +A +A
Sbjct: 175 ADPDVQLIAASQLARGDVFIAISHSGRTKTVVDAAKYAKISQATIICITNYPISPLAKNA 234

Query: 157 DIVLTL 162
           DIVL  
Sbjct: 235 DIVLQT 240


>gi|332300041|ref|YP_004441962.1| IMP dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
 gi|332177104|gb|AEE12794.1| IMP dehydrogenase [Porphyromonas asaccharolytica DSM 20707]
          Length = 500

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 66/185 (35%), Gaps = 16/185 (8%)

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           ++ +A ++      P + ES  +   P  SAIMQ    D +AIAL  +RN   +  +   
Sbjct: 34  RTPLAKYS------PAKEESRINLNIPFVSAIMQSVSNDTMAIAL--ARNGGLSFIFGSQ 85

Query: 209 PGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
           P  +   +                 V     L D + I        + V D+      L 
Sbjct: 86  PIEEEAEMVARVKKFKAGFVRSDANVSPKDTLADVLAITQRMGHSTIGVTDDGTPDGVLC 145

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D       D     V D M          +   L+ A  ++  H ++ L ++D+
Sbjct: 146 GIVTSRDYR--LSTDSLDRKVADFMTPFERLTTGCKGISLSEANDIIWAHKLNALPIIDE 203

Query: 323 CQKAI 327
            Q+  
Sbjct: 204 EQRLC 208


>gi|315225001|ref|ZP_07866820.1| CBS domain containing membrane protein [Capnocytophaga ochracea
           F0287]
 gi|314945114|gb|EFS97144.1| CBS domain containing membrane protein [Capnocytophaga ochracea
           F0287]
          Length = 138

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             +  +     L +A  +  +     + VV EG KL GI++  D+ R 
Sbjct: 1   MKQRVPVSQIMSKELVTLTPTQSLYEAERLFKKHNIRHIPVV-EGDKLIGIVSYSDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              D+               ++  +M K P  +  DT +    ++L   +   + VVD+ 
Sbjct: 60  SFADMTDGEEEVTSVVYDMYTIPQIMAKTPLTVSADTSIKEVAEILADQSFHSIPVVDN- 118

Query: 324 QKAIGIVHFLDLLRF 338
            + +G+V   DL+++
Sbjct: 119 GRLVGLVTTTDLIKY 133



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +   IL+++ F  + VVD   +L G++T  D+ +  
Sbjct: 92  VSADTSIKEVAEILADQSFHSIPVVD-NGRLVGLVTTTDLIKYL 134


>gi|239940752|ref|ZP_04692689.1| hypothetical protein SrosN15_07133 [Streptomyces roseosporus NRRL
           15998]
 gi|239987230|ref|ZP_04707894.1| hypothetical protein SrosN1_07992 [Streptomyces roseosporus NRRL
           11379]
          Length = 141

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 8/126 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFR 274
              A D+MHSG     +     L  A  ++ E   G + V  +G   ++ GIIT+ DI  
Sbjct: 1   MTTAKDIMHSG--ARWIPAHETLDRAAQLMREHNVGALPVSADGDSDRMVGIITDRDIVV 58

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                  D + ++  D+    P+ I  +  +   ++ ++ H I  L VV + +K +G++ 
Sbjct: 59  GCVAKGHDPSKVTAGDLAQGTPRWIEAEADVDAVLEEMQTHRIRRLPVV-ENKKLVGMIS 117

Query: 332 FLDLLR 337
             DL +
Sbjct: 118 EADLAQ 123


>gi|254173395|ref|ZP_04880068.1| putative CBS domain protein [Thermococcus sp. AM4]
 gi|214032804|gb|EEB73633.1| putative CBS domain protein [Thermococcus sp. AM4]
          Length = 181

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 49/152 (32%), Gaps = 17/152 (11%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
                                +        VK    L++ I +L         VVD+  +
Sbjct: 25  QLKRKEELSHNIRYIGKVPVEIVMDRDFVRVKPADSLVNLIALL-RDEESSAVVVDDSGR 83

Query: 263 LKGIITEGDIFRNFHKDLNT----------------LSVEDVMIKNPKVILEDTLLTVAM 306
           L G +T  DI   F    +                   VED+M+  P  I     L  A+
Sbjct: 84  LIGFVTMKDILHFFAPPRHHSVVGLSLLKRYSVSRATRVEDIMVTRPITINLKDDLGSAI 143

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            ++ +     L VVDD  K  GI+   D++R 
Sbjct: 144 SVMLESGKHHLPVVDDDGKVHGILEVKDIIRL 175


>gi|149190107|ref|ZP_01868383.1| DNA-binding transcriptional repressor RpiR [Vibrio shilonii AK1]
 gi|148835996|gb|EDL52957.1| DNA-binding transcriptional repressor RpiR [Vibrio shilonii AK1]
          Length = 289

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 76/191 (39%), Gaps = 6/191 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
           +  S  +S       L  +S  +   + +      L+ + + +   +      A E +  
Sbjct: 81  YAQSETQSYAPSERLLPDDSAEKIVSKVLQNSINALTEILNFVDVSM---VDAAAEALLK 137

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            +  + +  +G S  I       L   G  S              ++T  D+++V+S SG
Sbjct: 138 ARN-IELFAVGGSSIICEDFQHKLLRIGIKSSVPKDRHLMLMSASIMTDQDVVLVVSHSG 196

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +L   +  A++    +I+IT+   + ++  +DI L  P  PE         T+ +++
Sbjct: 197 QTVDLMDAVRQAKQSGATVISITNNYHAELSSLSDIPLYAPASPEPVLGKN--GTARLVK 254

Query: 183 LAIGDALAIAL 193
           LA+ D+L   +
Sbjct: 255 LAMIDSLYATM 265


>gi|146283338|ref|YP_001173491.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas stutzeri A1501]
 gi|145571543|gb|ABP80649.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas stutzeri A1501]
          Length = 489

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +     ++  +    + ++H     
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMSIEQQAAEVRKVKRHETAIVH---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + +    E  F    VV  G++L GI+T  D+   F  +    SV  +M 
Sbjct: 98  VTVTPETKISELLRKAHELGFSGFPVV-SGKELVGIVTGRDLR--FTPNAGD-SVAAIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  +LE T L      L +H I  ++VVD      G+V F D+ +  
Sbjct: 154 PKEKLVTVLEGTGLEEIKTELYKHRIEKMLVVDANFHLRGLVTFRDIEKAK 204


>gi|75910897|ref|YP_325193.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
 gi|75704622|gb|ABA24298.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
          Length = 1274

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 30/139 (21%)

Query: 232 LVKIGCPLIDAITILS----------------EKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           ++K    ++DAI  +S                E R  CV +V E  +L GI TE D+ R 
Sbjct: 23  IIKPETTVMDAIAQMSAVRAICDTDKLDEVHLEARSSCVLIV-EAGRLLGIFTERDVVRL 81

Query: 276 FH--KDLNTLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               + L  L++ +VMI     + E   T L  A+ LL+Q+ I  + ++D+ ++ +G++ 
Sbjct: 82  CSQRRCLENLAIREVMIHPVVSLHESEFTDLFFAVNLLQQYRIRHIPILDEEERVVGLLT 141

Query: 332 ---FL------DLLRFGII 341
                      DLLR  ++
Sbjct: 142 NESLRQTSRSVDLLRLRLV 160



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFR--NFHKDLNTLSV 285
               ++    +L+E R   V +V       +  +   GI+TE DI +      +L T  V
Sbjct: 173 PDSSMLAIAQLLTENRVSSVMIVQLCECPANPQKIPVGIVTERDIVQFQALGLNLETCQV 232

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + VM      +  D  L    Q++ Q  I  L V  +  + +GIV    LL+ 
Sbjct: 233 QTVMSTPIFAVRPDYSLRFVQQIMEQRLIRRLAVTGEQGELLGIVTQSSLLQA 285



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 60/148 (40%), Gaps = 13/148 (8%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG----CPLIDAITILSEKRFGCVAVVDE 259
           F                +  +      P+V +       L  A+ +L + R   + ++DE
Sbjct: 73  FTERDVVRLCSQRRCLENLAIREVMIHPVVSLHESEFTDLFFAVNLLQQYRIRHIPILDE 132

Query: 260 GQKLKGIITEGDIFRNFHK-DLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            +++ G++T   + +     DL  L  V +VM         D+ +    QLL ++ +S +
Sbjct: 133 EERVVGLLTNESLRQTSRSVDLLRLRLVSEVMTCEVICAAPDSSMLAIAQLLTENRVSSV 192

Query: 318 MVV-------DDCQKAIGIVHFLDLLRF 338
           M+V       +  +  +GIV   D+++F
Sbjct: 193 MIVQLCECPANPQKIPVGIVTERDIVQF 220


>gi|302337680|ref|YP_003802886.1| RpiR family transcriptional regulator [Spirochaeta smaragdinae DSM
           11293]
 gi|301634865|gb|ADK80292.1| transcriptional regulator, RpiR family [Spirochaeta smaragdinae DSM
           11293]
          Length = 284

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 53/143 (37%), Gaps = 3/143 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A+  + + K R+   G+G SG I              S               ++
Sbjct: 119 EELKKAIAVLHSSK-RIDFYGVGASGLIAQDAQQKFMRINRYSMAYTDTHLQATAAANLS 177

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
            +D  + +S+SG + ++   +  A++     I+IT    + +   ADI L       S  
Sbjct: 178 AEDAAVFISYSGETRDIVETMEIAKKTRAKTISITKFGNNTLNSKADIKLFTASPETSMR 237

Query: 171 HGLAPTTSAIMQLAIGDALAIAL 193
            G +   S I QL + D L   L
Sbjct: 238 SGAS--GSRIAQLNVIDILFSGL 258


>gi|52549562|gb|AAU83411.1| conserved hypothetical protein [uncultured archaeon GZfos28B8]
          Length = 139

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 50/113 (44%), Gaps = 1/113 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     L    +++SE       VV++  K  G+I+  D+FR   +D N++ V
Sbjct: 24  MEPEVITITEDASLEQLFSLISEYHHLGYPVVNKENKTTGVISYKDLFRVKREDWNSVRV 83

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ M      +     +  A++ + +  I  L+V+DD    +GIV    ++  
Sbjct: 84  KERMSTRLVSVSPGDGVIKAVEKMTEEGIGRLLVMDDD-TLVGIVTRSSIMDA 135



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIV 330
            +  +  L   ++  +M      I ED  L     L+ +++   L   VV+   K  G++
Sbjct: 8   RKLLNAHLRDTTIGAIMEPEVITITEDASLEQLFSLISEYH--HLGYPVVNKENKTTGVI 65

Query: 331 HFLDLLRFG 339
            + DL R  
Sbjct: 66  SYKDLFRVK 74



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 23/60 (38%), Gaps = 1/60 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  V  G  +I A+  ++E+  G + V+D+   L GI+T   I     
Sbjct: 79  NSVRVKERMSTRLVSVSPGDGVIKAVEKMTEEGIGRLLVMDDD-TLVGIVTRSSIMDAMG 137


>gi|18978263|ref|NP_579620.1| hypothetical protein PF1891 [Pyrococcus furiosus DSM 3638]
 gi|18894084|gb|AAL82015.1| hypothetical protein PF1891 [Pyrococcus furiosus DSM 3638]
          Length = 174

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 53/150 (35%), Gaps = 17/150 (11%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                              +        VK   PL + +  +         VVD+  +L 
Sbjct: 19  ARKEELSHNLRYISKVPVSLVMDRDFLKVKPETPLFE-LIAMFNVEETSAVVVDDENRLV 77

Query: 265 GIITEGDI-------FRNFHKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQL 308
           G IT  DI        R     +  L          VED+M+K P  I  D  L  A++L
Sbjct: 78  GFITMKDILHYFMPPRRYSIVGIGLLKKYGLTRASRVEDIMVKKPITIKIDDNLGNAIKL 137

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +     L V+D+ +K  GI+   D++R 
Sbjct: 138 MVETGKHHLPVIDEERKVHGILEVKDIIRL 167


>gi|304313907|ref|YP_003849054.1| 3-hexulose-6-phosphate isomerase [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587366|gb|ADL57741.1| predicted 3-hexulose-6-phosphate isomerase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 194

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 65/196 (33%), Gaps = 24/196 (12%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
             +I      L  +E  +  E   +F           G V + G+G+SG +    A  L 
Sbjct: 4   REAIRDIVDNLEKMEREIDAETVDRFIDT----LTSAGNVFVLGLGRSGLVAKAFAMRLM 59

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
                 F V            I   D +I +S SG +  + +    AR     ++A+TS 
Sbjct: 60  HLEINVFVVGETITP-----AINEGDALIAISGSGRTSYIVSAARIARERGAQVVAVTSH 114

Query: 148 NKSVVACHADIVLTL-------------PKEPESCPHGLAPTTSAIM--QLAIGDALAIA 192
            +S +   AD+ +T+              ++     H   P  +      L   D L   
Sbjct: 115 PESELGGIADLTVTVRGRTKIDGEKNYMKRQIRGNHHSRTPLGTLFEISALVFLDGLIAE 174

Query: 193 LLESRNFSENDFYVLH 208
           L+   +  E D    H
Sbjct: 175 LMHRLDKREEDLNERH 190


>gi|297527120|ref|YP_003669144.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
 gi|297256036|gb|ADI32245.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
          Length = 136

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               I  +     + +A   +  +  G + VVD+     GI+T+ DI        +D   
Sbjct: 8   MTPEIRFIDKNSSIKEAALRMINEGIGALIVVDQEG-PIGIVTKRDIIWGVLFEKRDPEK 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE +M     +I  ++ +   + L+ ++NIS L V  +  K IG++   DLL
Sbjct: 67  EPVEKIMSTPLIMIDSNSDIVQILDLMIRNNISHLPV-REGDKLIGMISDTDLL 119



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L   D+M    + I +++ +  A   +    I  L+VVD     IGIV   D++
Sbjct: 2   LKAYDIMTPEIRFIDKNSSIKEAALRMINEGIGALIVVDQEG-PIGIVTKRDII 54


>gi|260772597|ref|ZP_05881513.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio metschnikovii CIP 69.14]
 gi|260611736|gb|EEX36939.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio metschnikovii CIP 69.14]
          Length = 284

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QINRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|260598328|ref|YP_003210899.1| DNA-binding transcriptional regulator HexR [Cronobacter turicensis
           z3032]
 gi|260217505|emb|CBA31675.1| HTH-type transcriptional regulator hexR [Cronobacter turicensis
           z3032]
          Length = 288

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+   Q       + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLDHVRQSLDMATVNRAVDMLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     ++AITS   S +A  A
Sbjct: 161 DDIVVQRMSCMNGGPDDVVVLISHTGRTKSLVELARLARDNDALVLAITSRG-SPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + L L    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 SLALLLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|256852677|ref|ZP_05558048.1| CBS domain-containing protein [Enterococcus faecalis T8]
 gi|256712022|gb|EEU27059.1| CBS domain-containing protein [Enterococcus faecalis T8]
          Length = 155

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G+++  D+ R   + ++
Sbjct: 22  KVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNI 81

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 82  DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 141



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/75 (29%), Positives = 44/75 (58%), Gaps = 2/75 (2%)

Query: 265 GIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           GI+T+  I+R F   D+    V+++M   P ++ +DT +  A+  L  +++  L V+D+ 
Sbjct: 2   GILTKVIIWRLFSFFDVFQTKVQEIMSP-PLMVAQDTSIRDAITNLFMYDVGSLYVMDEA 60

Query: 324 QKAIGIVHFLDLLRF 338
           ++ +G++   DLLR 
Sbjct: 61  KELLGVLSRKDLLRA 75


>gi|94270649|ref|ZP_01291791.1| CBS [delta proteobacterium MLMS-1]
 gi|93450722|gb|EAT01796.1| CBS [delta proteobacterium MLMS-1]
          Length = 149

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 56/132 (42%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           VK   P+ +   +L EKR   V VVD+  KL G+ TE D+                    
Sbjct: 15  VKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLIDQAKKFHIPTAITILEAVI 74

Query: 274 -----RNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                +   K+++ ++   V D+    P  +  +T L     ++ + ++  L V+ +  +
Sbjct: 75  FLDRGKKVEKEVSKMAGSRVRDICTSEPVTVGPETPLDELATIMAEKHLHTLPVL-EDGQ 133

Query: 326 AIGIVHFLDLLR 337
            +G++   D++R
Sbjct: 134 LVGVIGKADIIR 145



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            S  ++M +    +  +  +     LL +  IS + VVDD  K +G+    DL+
Sbjct: 2   KSAREIMTREVVSVKPEMPVEELAALLWEKRISGVPVVDDDGKLVGVATESDLI 55


>gi|91200717|emb|CAJ73769.1| conserved hypothetical protein [Candidatus Kuenenia
           stuttgartiensis]
          Length = 243

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 53/159 (33%), Gaps = 36/159 (22%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  +     L +A  I+ E RF  + ++   +K+ GII++ D+ R
Sbjct: 73  HQRNSLHANQIMSSPVVTILPDTRLDEAWEIIREHRFRHLPILTPNKKVAGIISDRDLLR 132

Query: 275 --------------------NFHKDLN----------------TLSVEDVMIKNPKVILE 298
                                +  D +                  +V D+          
Sbjct: 133 EAAQSEASGDKQPVNTPAQKWYEADAHYTDAGFYHDNIYTFPKKKTVLDICKTRILTATP 192

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           DT L    ++L + +I  + +VD+    +GI+   D+LR
Sbjct: 193 DTELREIAKILIEEHIGSMPIVDENNHLLGIITRSDILR 231



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N+L    +M      IL DT L  A +++R+H    L ++   +K  GI+   DLLR 
Sbjct: 76  NSLHANQIMSSPVVTILPDTRLDEAWEIIREHRFRHLPILTPNKKVAGIISDRDLLRE 133



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 16/45 (35%), Positives = 21/45 (46%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               L +   IL E+  G + +VDE   L GIIT  DI R    +
Sbjct: 192 PDTELREIAKILIEEHIGSMPIVDENNHLLGIITRSDILRTIVAN 236


>gi|32472263|ref|NP_865257.1| chloride channel [Rhodopirellula baltica SH 1]
 gi|32443499|emb|CAD72941.1| putative chloride channel [Rhodopirellula baltica SH 1]
          Length = 614

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              DV      + L+     L + +  L++ +     VVD+ +++ GI ++ D+    + 
Sbjct: 476 KVGDVFDPNRKVLLIPEATTLDEIVHCLADNQQHYFPVVDKQKRIVGIFSDDDVRTYLYN 535

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIV 330
           D         DVM  +   +  +  L  A++     N+  L V  +D+  K +G++
Sbjct: 536 DSIWRLAVANDVMTTDLVSVTPEDDLNTALKRFTSLNLEELPVIDIDEPGKLLGML 591


>gi|327542061|gb|EGF28558.1| Cl- channel voltage-gated family protein [Rhodopirellula baltica
           WH47]
          Length = 614

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              DV      + L+     L + +  L++ +     VVD+ +++ GI ++ D+    + 
Sbjct: 476 KVGDVFDPNRKVLLIPEATTLDEIVHCLADNQQHYFPVVDKQKRIVGIFSDDDVRTYLYN 535

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIV 330
           D         DVM  +   +  +  L  A++     N+  L V  +D+  K +G++
Sbjct: 536 DSIWRLAVANDVMTTDLVSVTPEDDLNTALKRFTSLNLEELPVIDIDEPGKLLGML 591


>gi|239628778|ref|ZP_04671809.1| predicted protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518924|gb|EEQ58790.1| predicted protein [Clostridiales bacterium 1_7_47FAA]
          Length = 338

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 35/158 (22%), Positives = 63/158 (39%), Gaps = 7/158 (4%)

Query: 41  LESSLQGELSFQFHCAVEKIKAI-----KGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           L+  L+          VE+I          RV++TG+G S +    + S L   G P+  
Sbjct: 15  LKRYLKEYWPVD-REIVERIAVCFKEKAMNRVILTGMGSSLYAARCVQSYLTGHGIPALA 73

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
             + E S      I    L+I +S SG S E+  +   AR+ ++ ++ I +  +S +   
Sbjct: 74  FSSFELSRFQFNQIDSRCLVIAISQSGKSPEVVELADKARKVTV-VVGIHNYEESPLGAV 132

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            D +L +  + E          + ++   I   L   L
Sbjct: 133 CDFMLQIHGDKEYSVTNKTYELTMLILNLIAHRLTGGL 170


>gi|159905805|ref|YP_001549467.1| signal-transduction protein [Methanococcus maripaludis C6]
 gi|159887298|gb|ABX02235.1| putative signal-transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 186

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 49/118 (41%), Gaps = 8/118 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
               +  V +     D   IL +K  GC+ V+++  K   IITE D+      RN     
Sbjct: 11  MSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVSIITERDLALGVVSRNLKS-- 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + VE++       I   + L  A + +   N+  L V+D  +  +GIV   D+ + 
Sbjct: 69  KEVIVEEIASPKLIAIAPKSTLMDAARKMDLENVKRLPVIDGDE-LLGIVTVSDITKL 125



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            LSV + M      +  DT       +L+   I  L+V++D  K + I+   DL   G++
Sbjct: 4   ELSVTEAMSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVSIITERDLA-LGVV 62


>gi|20092877|ref|NP_618952.1| hypothetical protein MA4084 [Methanosarcina acetivorans C2A]
 gi|19918184|gb|AAM07432.1| hypothetical protein (multi-domain) [Methanosarcina acetivorans
           C2A]
          Length = 219

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 60/153 (39%), Gaps = 19/153 (12%)

Query: 202 NDFYVLHPGG-KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            DF      G +  +      + + + + +  +K   PL +  ++  +  +    VV+  
Sbjct: 59  EDFMPSEKEGERFESCLWMTIEDLMTRNVVT-IKENAPLEEVFSLFGKFPYHTFPVVNAN 117

Query: 261 QKLKGIITEGDIF----------RNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVA 305
            +L GII + D+           R+ H  L  +        D+MI +P  I  D  L  A
Sbjct: 118 NELVGII-DLDVVLEILLLCLVPRSKHTPLTAIRSLGGKARDIMITHPVTISLDATLKDA 176

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L+ +H     + V +  K  GI+   DL++ 
Sbjct: 177 SDLMMKHRFDR-VCVSNNGKLAGIISKKDLVKE 208



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                  + +   L DA  ++ + RF  V V +   KL GII++ D+ +   +    +S
Sbjct: 160 MITHPVTISLDATLKDASDLMMKHRFDRVCVSN-NGKLAGIISKKDLVKEICRRRKKVS 217


>gi|325273789|ref|ZP_08139978.1| DNA-binding transcriptional regulator HexR [Pseudomonas sp. TJI-51]
 gi|324101070|gb|EGB98727.1| DNA-binding transcriptional regulator HexR [Pseudomonas sp. TJI-51]
          Length = 290

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 65/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+S+ Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDSACQQLDPMQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVDVARLARENGASVLGLTA-AGSPLAN 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|313680041|ref|YP_004057780.1| polynucleotide adenylyltransferase region [Oceanithermus profundus
           DSM 14977]
 gi|313152756|gb|ADR36607.1| Polynucleotide adenylyltransferase region [Oceanithermus profundus
           DSM 14977]
          Length = 820

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V       +A+  + ++ +G + V DE  ++ G++   D+ R     + + +V       
Sbjct: 318 VPAELSAEEALVRMRQRGYGGLPVTDEAGRVIGVVRRRDLERAVRYGMGSGAVRGFATV- 376

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           P+ + ED  L+ A + L++     ++V+D   +A GI    DL R
Sbjct: 377 PRTLPEDAPLSEARRALKEGA-GRVLVLDGEGRAKGIFTRTDLYR 420



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 1/66 (1%)

Query: 274 RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R     L     + +VM +  + +  +     A+  +RQ     L V D+  + IG+V  
Sbjct: 295 RALEPYLAPEPRLGEVMTRFVETVPAELSAEEALVRMRQRGYGGLPVTDEAGRVIGVVRR 354

Query: 333 LDLLRF 338
            DL R 
Sbjct: 355 RDLERA 360


>gi|56477198|ref|YP_158787.1| protein stimulating phenylphosphate synthetase activity
           [Aromatoleum aromaticum EbN1]
 gi|56313241|emb|CAI07886.1| protein stimulating phenylphosphate synthetase activity
           [Aromatoleum aromaticum EbN1]
          Length = 222

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
              +  ++     L +A  ILSE     + VVD+  +L+G+IT     R  H  L T   
Sbjct: 7   MQPNPTVLTGDTLLSEAKRILSEANVHALPVVDD-GRLRGLITRAGCLRAAHAALRTQDT 65

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                      V+D+M++NP  I  D  +   +Q+ ++H +  L V+D     +G++ 
Sbjct: 66  DELSYFSNHVKVKDIMVRNPATIDADDTMEHCLQIGQEHGVGQLPVMDGD-HVVGMIS 122



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  NP V+  DTLL+ A ++L + N+  L VVDD  +  G++     LR 
Sbjct: 3   VRNWMQPNPTVLTGDTLLSEAKRILSEANVHALPVVDD-GRLRGLITRAGCLRA 55


>gi|332703843|ref|ZP_08423931.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
 gi|332553992|gb|EGJ51036.1| CBS domain containing membrane protein [Desulfovibrio africanus
           str. Walvis Bay]
          Length = 152

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 29/130 (22%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------------------F 273
               ++ A  +L EKR     VV EG +L GI+++ D+                      
Sbjct: 17  PDTEIVAAARVLLEKRINGAPVV-EGDRLVGILSQTDLVAQQKTLTMPTLFTLLDGFIPL 75

Query: 274 RNFHK------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           R++ K       ++ ++V + M   P  +  DT +T   Q++ +  I  L VV +  + +
Sbjct: 76  RSYEKLDEDMRKISAMTVGEAMTVKPVTVRPDTTITDIAQIMVEKKIHTLPVV-EGDRLV 134

Query: 328 GIVHFLDLLR 337
           G++   D+LR
Sbjct: 135 GVIGKEDVLR 144



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            S +D+M         DT +  A ++L +  I+   VV +  + +GI+   DL+
Sbjct: 2   FSAKDIMSTQVITFTPDTEIVAAARVLLEKRINGAPVV-EGDRLVGILSQTDLV 54



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 19/115 (16%), Positives = 33/115 (28%), Gaps = 4/115 (3%)

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
            P        G+   T  + Q      +         F            +        +
Sbjct: 36  APVVEGDRLVGILSQTDLVAQQKTL-TMPTLFTLLDGFIP--LRSYEKLDEDMRKISAMT 92

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                      V+    + D   I+ EK+   + VV EG +L G+I + D+ R  
Sbjct: 93  VGEAMTVKPVTVRPDTTITDIAQIMVEKKIHTLPVV-EGDRLVGVIGKEDVLRTL 146


>gi|323483884|ref|ZP_08089260.1| hypothetical protein HMPREF9474_01009 [Clostridium symbiosum
           WAL-14163]
 gi|323692887|ref|ZP_08107112.1| IMP dehydrogenase [Clostridium symbiosum WAL-14673]
 gi|323402783|gb|EGA95105.1| hypothetical protein HMPREF9474_01009 [Clostridium symbiosum
           WAL-14163]
 gi|323503062|gb|EGB18899.1| IMP dehydrogenase [Clostridium symbiosum WAL-14673]
          Length = 500

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 64/169 (37%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P TSAIMQ    D +AIAL       F      +      +  +    +  + S  + 
Sbjct: 51  NIPMTSAIMQSVSDDNMAIALAREGGLSFIFGSQSIESQAQMVSRVKNYRAGFVISDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     L D + +        VAV  +G    KL GI+T  D      +      V D
Sbjct: 110 --ITPENTLADILELKERTGHSTVAVTSDGTSMGKLLGIVTSRDYR--VSRMTLDTKVAD 165

Query: 288 VMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            M   ++     E T L  A  ++ +H ++ L ++D  Q+ + +V   D
Sbjct: 166 FMTSFEHLICADESTTLKEANDIIWEHKLNSLPIIDKEQRLVSMVFRKD 214


>gi|228475113|ref|ZP_04059840.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
 gi|228270877|gb|EEK12274.1| 6-phospho 3-hexuloisomerase [Staphylococcus hominis SK119]
          Length = 182

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 17/184 (9%)

Query: 29  RSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
             I+ E    LS LE +  G  + +   A         R+   G G+SG++ +  A  L 
Sbjct: 8   HLILEEIDNTLSHLEDNDYGRFANEVVGA--------SRIFTAGKGRSGYVANSFAMRLN 59

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +  +  A         I   DL+I++S SGS++ L+ +   A      +  IT++
Sbjct: 60  QLGKDASAIGEATTP-----SIKEHDLLIIISGSGSTEHLRLLAEKAHSVGAQIALITTK 114

Query: 148 NKSVVACHADIVLTLPKEPESCPHGL-APTTSAIMQL--AIGDALAIALLESRNFSENDF 204
            +S +   AD V+ LP   +    G   P  S   Q      D++ I L+++ N +E   
Sbjct: 115 TESKIGDVADTVIALPAGTKHEAEGSEQPLGSLFEQSSLIFLDSVVIGLMDAFNINEEAM 174

Query: 205 YVLH 208
              H
Sbjct: 175 QDNH 178


>gi|327481730|gb|AEA85040.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas stutzeri DSM
           4166]
          Length = 489

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 64/171 (37%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +     ++  +    + ++H     
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMSIEQQAAEVRKVKRHETAIVH---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     + + +    E  F    VV  G++L GI+T  D+   F  +    SV  +M 
Sbjct: 98  VTVTPETKISELLRKAHELGFSGFPVV-SGKELVGIVTGRDLR--FTPNAGD-SVAAIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  +LE T L      L +H I  ++VVD      G+V F D+ +  
Sbjct: 154 PKEKLVTVLEGTGLEEIKTELYKHRIEKMLVVDANFHLRGLVTFRDIEKAK 204


>gi|284161506|ref|YP_003400129.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284011503|gb|ADB57456.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 128

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
           V    P+ + + I+ +++ G V V     ++ GI TE D+  +   +      V      
Sbjct: 15  VDYRTPVKEVVRIMGQRKIGSVLVS-RNGEIYGIFTERDLVSKVLLEGSLDDDVGKYTST 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  D  L  A +++    I  L+VV +  K +GI+   D++R 
Sbjct: 74  PLITVSLDYDLKEATRIMSDMKIKRLVVV-EDGKIVGILTASDVVRA 119



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ++   +  V +   L +A  I+S+ +   + VV E  K+ GI+T  D+ R   K
Sbjct: 69  KYTSTPLITVSLDYDLKEATRIMSDMKIKRLVVV-EDGKIVGILTASDVVRAIAK 122


>gi|148379064|ref|YP_001253605.1| CBS domain protein [Clostridium botulinum A str. ATCC 3502]
 gi|153933178|ref|YP_001383447.1| CBS domain-containing protein [Clostridium botulinum A str. ATCC
           19397]
 gi|153935635|ref|YP_001386994.1| CBS domain-containing protein [Clostridium botulinum A str. Hall]
 gi|153938115|ref|YP_001390432.1| CBS domain-containing protein [Clostridium botulinum F str.
           Langeland]
 gi|148288548|emb|CAL82628.1| conserved hypothetical protein [Clostridium botulinum A str. ATCC
           3502]
 gi|152929222|gb|ABS34722.1| CBS domain protein [Clostridium botulinum A str. ATCC 19397]
 gi|152931549|gb|ABS37048.1| CBS domain protein [Clostridium botulinum A str. Hall]
 gi|152934011|gb|ABS39509.1| CBS domain protein [Clostridium botulinum F str. Langeland]
 gi|295318519|gb|ADF98896.1| CBS domain protein [Clostridium botulinum F str. 230613]
 gi|322805403|emb|CBZ02967.1| hypothetical protein H04402_01152 [Clostridium botulinum H04402
           065]
          Length = 126

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               + ++     +  A+ +++E       V DE   L G+I + DI+R        +T 
Sbjct: 6   MNTHVIVLNPKDSIKKALNLMNENNINGAPVADEEGNLIGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM K      E+  +    + +   +I  + +VD  +K +GIV   D+L+
Sbjct: 66  PVEWVMTKEVFTASEEEDVISIAKKILDKDIIAMPIVDSSKKLLGIVSVEDILK 119



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M  +  V+     +  A+ L+ ++NI+   V D+    IG++   D+ RF
Sbjct: 4   DIMNTHVIVLNPKDSIKKALNLMNENNINGAPVADEEGNLIGMIVKADIYRF 55


>gi|328948980|ref|YP_004366317.1| IMP dehydrogenase [Treponema succinifaciens DSM 2489]
 gi|328449304|gb|AEB15020.1| IMP dehydrogenase [Treponema succinifaciens DSM 2489]
          Length = 502

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 40/192 (20%), Positives = 73/192 (38%), Gaps = 19/192 (9%)

Query: 157 DIVLTLPKEPESCPHG-------LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
           ++ L  P    +   G         P  SA+MQ    D +AIAL +     F      + 
Sbjct: 30  NVSLKTPVVRFNKKSGEKPSLSMNIPLVSAVMQSVSDDKMAIALAKEGGISFIFGSQTIE 89

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
           +    +  +    +  + S  +   ++    L + ++++ +     +AV D+G    KL+
Sbjct: 90  NQAAMVARVKSYKAGFVTSDSN---IRPDQTLEEVVSLIEQTGHSTIAVTDDGTAHGKLE 146

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIITE D             V + M          +   L+ A  L+  H ++ L ++DD
Sbjct: 147 GIITERDFR--IDHVPANSKVNEYMTPFAKLVTGKDGITLSAANDLIWAHKVNQLPIIDD 204

Query: 323 CQKAIGIVHFLD 334
               + IV   D
Sbjct: 205 KNHLVSIVFRKD 216


>gi|320450463|ref|YP_004202559.1| magnesium transporter [Thermus scotoductus SA-01]
 gi|320150632|gb|ADW22010.1| magnesium transporter [Thermus scotoductus SA-01]
          Length = 449

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 47/109 (43%), Gaps = 9/109 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V+ G  + + I  L            + VVDE  +LKG+++  D+     K      V +
Sbjct: 144 VREGMTVEEVIRFLRRAAPDAETIYYIYVVDEAGRLKGVLSLRDLIVADPK----TKVAE 199

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M         DT      +L+  ++ +VL VVD+    +GIV   D+L
Sbjct: 200 IMNPKVVFARTDTDQEEVARLMADYDFTVLPVVDEDGVLVGIVTVDDVL 248



 Score = 39.9 bits (92), Expect = 0.56,   Method: Composition-based stats.
 Identities = 13/67 (19%), Positives = 28/67 (41%), Gaps = 4/67 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLN 281
               +   +      +   ++++  F  + VVDE   L GI+T  D+         +D++
Sbjct: 201 MNPKVVFARTDTDQEEVARLMADYDFTVLPVVDEDGVLVGIVTVDDVLDVLEEEATEDIH 260

Query: 282 TLSVEDV 288
            ++  DV
Sbjct: 261 RMAAVDV 267


>gi|227517947|ref|ZP_03947996.1| transcriptional regulator [Enterococcus faecalis TX0104]
 gi|229546872|ref|ZP_04435597.1| transcriptional regulator [Enterococcus faecalis TX1322]
 gi|229548966|ref|ZP_04437691.1| transcriptional regulator [Enterococcus faecalis ATCC 29200]
 gi|293382569|ref|ZP_06628503.1| CBS domain protein [Enterococcus faecalis R712]
 gi|293387799|ref|ZP_06632341.1| CBS domain protein [Enterococcus faecalis S613]
 gi|307269650|ref|ZP_07550984.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|307272044|ref|ZP_07553309.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|307275508|ref|ZP_07556650.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|307278929|ref|ZP_07559989.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|307286884|ref|ZP_07566964.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|307290013|ref|ZP_07569937.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|312901016|ref|ZP_07760307.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|312904587|ref|ZP_07763745.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|312906823|ref|ZP_07765820.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|312952703|ref|ZP_07771565.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|312978922|ref|ZP_07790648.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|227074601|gb|EEI12564.1| transcriptional regulator [Enterococcus faecalis TX0104]
 gi|229305987|gb|EEN71983.1| transcriptional regulator [Enterococcus faecalis ATCC 29200]
 gi|229308037|gb|EEN74024.1| transcriptional regulator [Enterococcus faecalis TX1322]
 gi|291080117|gb|EFE17481.1| CBS domain protein [Enterococcus faecalis R712]
 gi|291082774|gb|EFE19737.1| CBS domain protein [Enterococcus faecalis S613]
 gi|306498855|gb|EFM68349.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|306502009|gb|EFM71296.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|306504411|gb|EFM73621.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|306507896|gb|EFM77024.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|306511264|gb|EFM80269.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|306514012|gb|EFM82601.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|310627077|gb|EFQ10360.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|310629219|gb|EFQ12502.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|310632100|gb|EFQ15383.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|311288359|gb|EFQ66915.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|311291842|gb|EFQ70398.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|315027002|gb|EFT38934.1| CBS domain pair protein [Enterococcus faecalis TX2137]
 gi|315029715|gb|EFT41647.1| CBS domain pair protein [Enterococcus faecalis TX4000]
 gi|315031690|gb|EFT43622.1| CBS domain pair protein [Enterococcus faecalis TX0017]
 gi|315034253|gb|EFT46185.1| CBS domain pair protein [Enterococcus faecalis TX0027]
 gi|315144316|gb|EFT88332.1| CBS domain pair protein [Enterococcus faecalis TX2141]
 gi|315147975|gb|EFT91991.1| CBS domain pair protein [Enterococcus faecalis TX4244]
 gi|315149546|gb|EFT93562.1| CBS domain pair protein [Enterococcus faecalis TX0012]
 gi|315153101|gb|EFT97117.1| CBS domain pair protein [Enterococcus faecalis TX0031]
 gi|315156874|gb|EFU00891.1| CBS domain pair protein [Enterococcus faecalis TX0043]
 gi|315157661|gb|EFU01678.1| CBS domain pair protein [Enterococcus faecalis TX0312]
 gi|315162910|gb|EFU06927.1| CBS domain pair protein [Enterococcus faecalis TX0645]
 gi|315165110|gb|EFU09127.1| CBS domain pair protein [Enterococcus faecalis TX1302]
 gi|315168009|gb|EFU12026.1| CBS domain pair protein [Enterococcus faecalis TX1341]
 gi|315171962|gb|EFU15979.1| CBS domain pair protein [Enterococcus faecalis TX1342]
 gi|315173260|gb|EFU17277.1| CBS domain pair protein [Enterococcus faecalis TX1346]
 gi|315574231|gb|EFU86422.1| CBS domain pair protein [Enterococcus faecalis TX0309B]
 gi|315577360|gb|EFU89551.1| CBS domain pair protein [Enterococcus faecalis TX0630]
 gi|315581613|gb|EFU93804.1| CBS domain pair protein [Enterococcus faecalis TX0309A]
 gi|327534611|gb|AEA93445.1| CBS domain protein [Enterococcus faecalis OG1RF]
 gi|329577496|gb|EGG58937.1| putative transcriptional repressor CcpN [Enterococcus faecalis
           TX1467]
          Length = 228

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G+++  D+ R   + ++
Sbjct: 95  KVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNI 154

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 155 DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 214



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V+++M   P ++ +DT +  A+  L  +++  L V+D+ ++ +G++   DLLR 
Sbjct: 90  DVFQTKVQEIMSP-PLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRA 148


>gi|332799672|ref|YP_004461171.1| RpiR family transcriptional regulator [Tepidanaerobacter sp. Re1]
 gi|332697407|gb|AEE91864.1| transcriptional regulator, RpiR family [Tepidanaerobacter sp. Re1]
          Length = 280

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 57/165 (34%), Gaps = 3/165 (1%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
             K  + ++ES++      + + AVE I   K R+ I GIG S  +              
Sbjct: 99  ITKNNMQAIESTMDVLSRDEINKAVEAIMQAK-RLDIYGIGASAIVAQDAMHKFMRINKA 157

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                           +T  D+ I +S+SG + +    L  A+      I IT    S +
Sbjct: 158 CTAYLDNHMQLASAANLTSKDVAIGISYSGQTIDTVEALRLAKEARATTICITKFGNSPI 217

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +DI L                 S + QL + D +  A+   +
Sbjct: 218 TEVSDIKLF--VTSSEALFRSGAMASRMAQLNVIDIIFSAVACKK 260


>gi|295104446|emb|CBL01990.1| transcriptional regulator, RpiR family [Faecalibacterium
           prausnitzii SL3/3]
          Length = 288

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 55/148 (37%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    VE I   +  ++  GIG S  +             P      + +        T
Sbjct: 120 DELEQCVELIANARTVLLF-GIGSSLCVAKDTYLKFLRLDKPCVVNEDSHSQLLQARNAT 178

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ IV S+SG + E+   +   +    P+IA+T    S VA  AD VL +        
Sbjct: 179 AQDVGIVFSYSGQTMEMIQCIKEMKAGGAPVIAVTRYYPSEVAQLADHVLYVAANESLFR 238

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
           +G    +S + QL + D L  A     +
Sbjct: 239 NGA--MSSRLSQLNVVDILYTAYASRNH 264


>gi|229542982|ref|ZP_04432042.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
 gi|229327402|gb|EEN93077.1| transcriptional regulator, RpiR family [Bacillus coagulans 36D1]
          Length = 283

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 67/170 (39%), Gaps = 6/170 (3%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A++   +    + +L+ ++        H AVE I   K  +V  G G +  I        
Sbjct: 102 AIKVFES---NIETLQDTIHTLNQKHLHEAVEWICRAK-HIVFYGCGSASVIALDALEKF 157

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
             T                    T++D+ + +S +G+  E+  +L   ++     IAIT 
Sbjct: 158 LQTDLAVTAYTDPHLQLLSAARCTKEDVAVFISHAGADKEMLKLLQAVQKTGAKTIAITQ 217

Query: 147 ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             KS ++  AD+ L      +      +  ++ I+QL++ D L + ++  
Sbjct: 218 FAKSPLSQKADVPLFT--VSQEADFRFSSFSARIVQLSLIDTLYVNVMLR 265


>gi|11497731|ref|NP_068952.1| hypothetical protein AF0111 [Archaeoglobus fulgidus DSM 4304]
 gi|2650538|gb|AAB91120.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 299

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 49/107 (45%), Gaps = 2/107 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H    I  V     +++A  +L+E    C  V  +  K  GI T   + +   +      
Sbjct: 180 HMSSPIISVDAEESVVNAAKVLAENGIYCTPV-QKNGKFVGIFTLDHVAKAVAEGKLNAK 238

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           VE+VM     ++ +DT +  A++L+R   + +L+V D   + +G++ 
Sbjct: 239 VEEVMRPKLVMVEKDTKIGEALRLMRDEKVRILLVTDK-GEPVGVIT 284



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/74 (14%), Positives = 30/74 (40%), Gaps = 1/74 (1%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F + H    +    + A         + +V+    + +A+ ++ +++   + V D+  + 
Sbjct: 221 FTLDHVAKAVAEGKLNAKVEEVMRPKLVMVEKDTKIGEALRLMRDEKVRILLVTDK-GEP 279

Query: 264 KGIITEGDIFRNFH 277
            G+IT+  I     
Sbjct: 280 VGVITDQKILTRLA 293


>gi|16760837|ref|NP_456454.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. CT18]
 gi|29141471|ref|NP_804813.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. Ty2]
 gi|168233705|ref|ZP_02658763.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|168238517|ref|ZP_02663575.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|168241515|ref|ZP_02666447.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168462584|ref|ZP_02696515.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168820707|ref|ZP_02832707.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194442494|ref|YP_002041152.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Newport str. SL254]
 gi|194449540|ref|YP_002045940.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Heidelberg str. SL476]
 gi|194469117|ref|ZP_03075101.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194736565|ref|YP_002114922.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197250084|ref|YP_002146136.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Agona str. SL483]
 gi|204930967|ref|ZP_03221793.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|213426412|ref|ZP_03359162.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. E02-1180]
 gi|213854140|ref|ZP_03382672.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. M223]
 gi|238912053|ref|ZP_04655890.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|289829028|ref|ZP_06546724.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Typhi str. E98-3139]
 gi|25303537|pir||AC0742 probable hex-regulon repressor STY2095 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16503134|emb|CAD05638.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Typhi]
 gi|29137098|gb|AAO68662.1| putative hex-regulon repressor [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|194401157|gb|ACF61379.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194407844|gb|ACF68063.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194455481|gb|EDX44320.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Kentucky str. CVM29188]
 gi|194712067|gb|ACF91288.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|195634465|gb|EDX52817.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197213787|gb|ACH51184.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197288657|gb|EDY28032.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Salmonella enterica subsp. enterica serovar
           Schwarzengrund str. SL480]
 gi|204320011|gb|EDZ05216.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205332250|gb|EDZ19014.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Kentucky str. CDC 191]
 gi|205339514|gb|EDZ26278.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205342680|gb|EDZ29444.1| HTH-type transcriptional regulator HexR [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|320085605|emb|CBY95383.1| Bifunctional protein glk Includes: Glucokinase; Glucose kinase;
           Includes: RecName: Full=putative HTH-type
           transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|322618125|gb|EFY15017.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322625796|gb|EFY22615.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322626248|gb|EFY23058.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322632662|gb|EFY29407.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322639006|gb|EFY35699.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322640446|gb|EFY37099.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 531954]
 gi|322644211|gb|EFY40756.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322649534|gb|EFY45966.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322655441|gb|EFY51749.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322660220|gb|EFY56458.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322662901|gb|EFY59108.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322668086|gb|EFY64245.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322675492|gb|EFY71566.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322683094|gb|EFY79110.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322686788|gb|EFY82766.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323195321|gb|EFZ80501.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323199213|gb|EFZ84308.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323204062|gb|EFZ89077.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323207470|gb|EFZ92418.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323211032|gb|EFZ95890.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323217453|gb|EGA02172.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323219954|gb|EGA04427.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323224446|gb|EGA08734.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323231476|gb|EGA15589.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323240487|gb|EGA24530.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323246743|gb|EGA30715.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323253599|gb|EGA37427.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323255367|gb|EGA39137.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323260260|gb|EGA43881.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323266851|gb|EGA50337.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323269057|gb|EGA52513.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
          Length = 289

 Score = 72.6 bits (177), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|300123488|emb|CBK24760.2| unnamed protein product [Blastocystis hominis]
          Length = 514

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 74/171 (43%), Gaps = 12/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M      ++AI++ +        ++  +L    ++G +    + ++      
Sbjct: 66  KIPMVSSCMDTVTEHSMAISMAQHGGLGVVHHNCSILEQAHEVGLVKKYRNGII---LEP 122

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++K    + D   I +E  F    + + G   +KL GI+T  D+  +   DLNT  + D
Sbjct: 123 TILKPDDTVADMKAIKAEYGFSGFPITEHGRLGEKLLGIVTNRDV--DLVTDLNT-PIRD 179

Query: 288 VMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM   N + +   T    A ++LR+  +  L VVD     + ++   DLL+
Sbjct: 180 VMTTENLQTVSVQTADEEAKEILRKAKVGKLPVVDAEGNIVALMSRTDLLK 230


>gi|242279465|ref|YP_002991594.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242122359|gb|ACS80055.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 149

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 28/131 (21%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------------- 273
           +    +  A  ++ EK    + VVD   KL G++ + D+                     
Sbjct: 16  EPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLVAQQKTISMPSLFTILDGFIS 75

Query: 274 ----RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                +  K++N      VE  M  +P  I  DT +     L+ +     L VV +  K 
Sbjct: 76  FSSNEDLEKEVNKIAATKVEHAMTPDPITIEPDTSIEKIADLMVERKFYTLPVV-ENGKL 134

Query: 327 IGIVHFLDLLR 337
           +G+V   D+L+
Sbjct: 135 VGVVGKEDVLK 145



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +D+M      +  DT +  A +L+ + +++ L VVD   K IG++   DL+
Sbjct: 2   LKAKDIMTSGALTLEPDTDVATAAKLMLEKHLNGLPVVDRSGKLIGVLCQSDLV 55


>gi|167746893|ref|ZP_02419020.1| hypothetical protein ANACAC_01605 [Anaerostipes caccae DSM 14662]
 gi|167653853|gb|EDR97982.1| hypothetical protein ANACAC_01605 [Anaerostipes caccae DSM 14662]
          Length = 196

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 13/176 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + +   +       + I   K R+ + G G+SG      ++ L   G   +FV 
Sbjct: 22  LNELMENAKEIQNEDVLKVEDLIMNAK-RIFVGGAGRSGFAARGFSNRLMHLGFQVYFVG 80

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL+IV S SG++  L +    A+     +  +T   ++ +   AD
Sbjct: 81  EPTTP-----SIQEGDLLIVGSGSGNTASLVSNAKTAKAQGAKVATVTMFPENKIGSMAD 135

Query: 158 IVLTLP-KEPESCPHGL---APTTSAIMQLAIGDALAIALLESRNFSEND---FYV 206
             + +P    +    G      + S+  +L      AI +   R   + D   F  
Sbjct: 136 AAIRIPGVTEKCAGQGKGSVQSSGSSFEELTWITYDAIVMDLMRITKQGDKELFAR 191


>gi|52549220|gb|AAU83069.1| FOG CBS domain [uncultured archaeon GZfos26E7]
          Length = 263

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVED 287
            P +     +  A   + + RF  V V+   + Q L GI++  D+ +  H   + L V D
Sbjct: 78  CPAITPDTGVEGACAAMVDARFSRVPVIRSIDDQTLVGILSTTDLLKKLHPRAH-LVVRD 136

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +M +     L D  +      + + + + L V+      IG+V   D+++ G+
Sbjct: 137 IMTEKVVTCLPDDRIAKIWSTMLESDYTGLPVLSPKGALIGMVTRYDIIKAGV 189



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/134 (17%), Positives = 54/134 (40%), Gaps = 14/134 (10%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             A  V+    +  +V       +    + + E  +  + V+     L G++T  DI + 
Sbjct: 128 PRAHLVVRDIMTEKVVTCLPDDRIAKIWSTMLESDYTGLPVLSPKGALIGMVTRYDIIKA 187

Query: 276 F-----------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                        +   ++ VE +M      +   T ++ A+ ++ + ++  L VVD+  
Sbjct: 188 GVARIGLEDEGGTRAKQSVLVERIMNTPAYTVSPATPVSEAIGMMLKLDVGRLSVVDN-N 246

Query: 325 KAIGIVHFLDLLRF 338
           + +GI+  LD ++ 
Sbjct: 247 RPVGIIDRLDAVQA 260



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 35/58 (60%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLRF 338
           ++V +VM+K    +  D  +T A Q++R H++  L VV+D +  + +G++   D+++ 
Sbjct: 5   MTVGNVMLKEVVCVTADDFVTHARQIMRDHHLRSLPVVEDERSMRVLGMLTDQDVMQI 62



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 47/117 (40%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRNFHKDLNTL 283
               +  V     +  A  I+ +     + VV++    ++ G++T+ D+ +      + +
Sbjct: 11  MLKEVVCVTADDFVTHARQIMRDHHLRSLPVVEDERSMRVLGMLTDQDVMQ-ISSAHSGV 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
           +V       P  I  DT +  A   +     S + V+   D Q  +GI+   DLL+ 
Sbjct: 70  TVRGFATVCPA-ITPDTGVEGACAAMVDARFSRVPVIRSIDDQTLVGILSTTDLLKK 125


>gi|89076393|ref|ZP_01162722.1| putative transcriptional regulator [Photobacterium sp. SKA34]
 gi|89047909|gb|EAR53501.1| putative transcriptional regulator [Photobacterium sp. SKA34]
          Length = 285

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/161 (17%), Positives = 63/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K ++   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDTMQINRAVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +   +  D+++V+S +G +  L  I   AR     +I +T++  S +     
Sbjct: 162 DIVMQRMSVINCSDGDVVVVISHTGRTKSLVEIAQMARANGATVIGVTAK-DSPLERECS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + + L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSICLDVPEDTDIY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|158431295|pdb|2YVZ|A Chain A, Crystal Structure Of Magnesium Transporter Mgte Cytosolic
           Domain, Mg2+-Free Form
 gi|158431296|pdb|2YVZ|B Chain B, Crystal Structure Of Magnesium Transporter Mgte Cytosolic
           Domain, Mg2+-Free Form
          Length = 278

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/199 (19%), Positives = 70/199 (35%), Gaps = 19/199 (9%)

Query: 153 ACHADIVLTLPKEPESCPHGLAP--TTSAIMQLAIGDALAIALLESRNFSENDFYVL--- 207
           A  A+++  L  E ++      P      I++    D LA AL   R      F  L   
Sbjct: 58  AKAAEVLSHLSPEEQAEYLKTLPPWRLREILEELSLDDLADALQAVRKEDPAYFQRLKDL 117

Query: 208 -----HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVV 257
                    +    +               V+ G  + + +  L            + VV
Sbjct: 118 LDPRTRAEVEALARYEEDEAGGLXTPEYVAVREGXTVEEVLRFLRRAAPDAETIYYIYVV 177

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           DE  +LKG+++  D+     +      V ++       +  DT      +L   ++ +VL
Sbjct: 178 DEKGRLKGVLSLRDLIVADPR----TRVAEIXNPKVVYVRTDTDQEEVARLXADYDFTVL 233

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            VVD+  + +GIV   D+L
Sbjct: 234 PVVDEEGRLVGIVTVDDVL 252



 Score = 39.5 bits (91), Expect = 0.85,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLNTLSVEDV 288
           V+      +   + ++  F  + VVDE  +L GI+T  D+         +D++ L   DV
Sbjct: 212 VRTDTDQEEVARLXADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEAEATEDIHKLGAVDV 271


>gi|71726102|gb|AAZ39225.1| hypothetical protein [Janthinobacterium lividum]
          Length = 148

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   G+ +  V    PL+DA   ++EK  G + VV E   L G++T  ++    H++   
Sbjct: 7   LQVKGNILYTVTPDQPLLDAANTMAEKDIGSL-VVMEFGDLVGMLTFREVLNALHENAGQ 65

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +V   M  +P  +  DT +    +++ + +   L V+ + +  +G++ F D+ R 
Sbjct: 66  IGGGTVRKHMDDHPITVTPDTEVNEVRRIMLEKHARYLPVM-NAKTLLGVISFYDVARA 123


>gi|315426100|dbj|BAJ47746.1| inosine monophosphate dehydrogenase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 492

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/168 (16%), Positives = 58/168 (34%), Gaps = 9/168 (5%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            P  SA M       +A+A+         + F  +    ++  + +       + +    
Sbjct: 53  VPIVSAAMDTVTEAEMAVAMAREGGIGVIHRFNTVEQ--QVEQVKLVKRAENIAVEEPYT 110

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           ++    + +A  ++  K    + V    +KL GI++  DI            V + M   
Sbjct: 111 IEPEATVAEAEALMRRKNVSGLLVTKSSRKLVGILSRRDILFA----PREAKVSEYMTPR 166

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                      L  A Q+  +H +  L +VD      G++   D+++ 
Sbjct: 167 EKLITAPPSISLEEAKQIFMKHKVEKLPLVDSEWNIKGLITSADIVKK 214


>gi|284051004|ref|ZP_06381214.1| multi-sensor hybrid histidine kinase [Arthrospira platensis str.
           Paraca]
          Length = 703

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 25/131 (19%)

Query: 232 LVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGD 271
           LV +     +AI ++SE R  C                      +V EG++L GI+T+GD
Sbjct: 22  LVTVETTAREAIALMSESRASCSISSKASVLLEEVYGEARSSCVLVVEGEQLVGILTQGD 81

Query: 272 IFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDDCQKAI 327
           I R     + L  L V +VM  +     E  L      + LLR++ I  L +VDD  + +
Sbjct: 82  IIRLCTEKRPLEQLLVGEVMTASVLSWRESELSDFFEVIDLLRKNQICHLPLVDDSDRLV 141

Query: 328 GIVHFLDLLRF 338
           G++   + LR+
Sbjct: 142 GLIT-HETLRY 151



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 10/110 (9%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI 296
             + I +L + +   + +VD+  +L G+IT   +    H    L   +VE+VM       
Sbjct: 116 FFEVIDLLRKNQICHLPLVDDSDRLVGLITHETLRYISHPIDLLRLRTVEEVMTTEVICA 175

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDC--------QKAIGIVHFLDLLRF 338
             ++ L     L+ Q+ ++ +++V+             +GI+   D+++F
Sbjct: 176 SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTAVNVPVGILTEGDIVKF 225



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 51/132 (38%), Gaps = 12/132 (9%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--------QKLKGII 267
                 +VM +            L++   ++++ R  CV +V+              GI+
Sbjct: 160 RLRTVEEVMTTEVICA--SPESNLLEIACLMTQYRVNCVVLVETDFVNNSTAVNVPVGIL 217

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           TEGDI +   F  DL   S + +M      +  +  L    +L+    I  ++V     +
Sbjct: 218 TEGDIVKFNTFCLDLENYSSKQLMSTPVFSVATNENLWRIHELMSSQYIRRVLVTGSHGE 277

Query: 326 AIGIVHFLDLLR 337
            +GIV    +L+
Sbjct: 278 LLGIVTQTSMLK 289


>gi|302383850|ref|YP_003819673.1| signal transduction protein with CBS domains [Brevundimonas
           subvibrioides ATCC 15264]
 gi|302194478|gb|ADL02050.1| putative signal transduction protein with CBS domains
           [Brevundimonas subvibrioides ATCC 15264]
          Length = 142

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 41/108 (37%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---TLSVEDVM 289
           +     L  A   L   R G + V D G+++ G+ +E D+ +    D        V   M
Sbjct: 17  IAPDMTLARACGELDRCRVGALIVCD-GERVVGVFSERDLVKAVAADGAPGLERPVSHYM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K+         + + M  +    I  L V+    +  G++   D+++
Sbjct: 76  TKDVIFAEPGETVAILMGRMTDRRIRHLPVL-KDNRLSGVISIGDVVK 122


>gi|1708475|sp|P50097|IMDH_TRIFO RecName: Full=Inosine-5'-monophosphate dehydrogenase; Short=IMP
           dehydrogenase; Short=IMPD; Short=IMPDH
 gi|28373643|pdb|1ME7|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Rvp And Moa Bound
 gi|34810634|pdb|1MEI|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Xmp And Mycophenolic Acid
           Bound
 gi|34810635|pdb|1MEW|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Xmp And Nad Bound
 gi|157829917|pdb|1AK5|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus
 gi|1352865|gb|AAB01581.1| inosine monophosphate dehydrogenase [Tritrichomonas foetus]
          Length = 503

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 21/186 (11%)

Query: 155 HADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
            +++ L+ P     K  +S  +   P  SAIMQ   G+ +AIAL      S    ++   
Sbjct: 28  PSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGIS----FIFG- 82

Query: 210 GGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QK 262
              + +       V +      +    VK      D + I        VAV D+G     
Sbjct: 83  SQSIESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGV 142

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T+ D             V D+M          +DT L+ A +++ +  ++ L ++
Sbjct: 143 LLGLVTQRDY--PIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPII 200

Query: 321 DDCQKA 326
           DD Q  
Sbjct: 201 DDDQHL 206


>gi|332284551|ref|YP_004416462.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
 gi|330428504|gb|AEC19838.1| hypothetical protein PT7_1298 [Pusillimonas sp. T7-7]
          Length = 153

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 56/119 (47%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   G ++       P++ A+  +SE+  G + ++D   +L G++T  +I R+ H++   
Sbjct: 8   LRVKGHTLYTATPDTPILQALETMSEQDIGSLVIMD-HGELAGMLTFREIIRHLHRNQGN 66

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +V  VM   P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 67  TGNYTVRSVMDDAPVSVSPNTSFEEVQRLMLEKHARYMPVMDGP-TLMGVISFYDMAQA 124


>gi|330838326|ref|YP_004412906.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
 gi|329746090|gb|AEB99446.1| CBS domain containing protein [Selenomonas sputigena ATCC 35185]
          Length = 216

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 40/106 (37%), Gaps = 12/106 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   V     +  A  ++ + RF  + VVDE  KL G +++ DI R          
Sbjct: 6   RMAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMRVSPSPATTLS 65

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                  L  + + ++M K    + +D  +  A  ++  H I  L 
Sbjct: 66  RYEITSLLAKMCIGEIMQKEVVSVKDDATIEEAALIMYNHKIGGLP 111



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/49 (34%), Positives = 28/49 (57%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KNP  +  DT ++ A  L+++H    L VVD+  K +G +   D++R
Sbjct: 7   MAKNPFTVTPDTKVSAAKDLMKKHRFRRLPVVDEDGKLVGFLSDRDIMR 55


>gi|225403159|ref|ZP_03760456.1| hypothetical protein CLOSTASPAR_04487 [Clostridium asparagiforme
           DSM 15981]
 gi|225043207|gb|EEG53453.1| hypothetical protein CLOSTASPAR_04487 [Clostridium asparagiforme
           DSM 15981]
          Length = 288

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 58/161 (36%), Gaps = 3/161 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + SLE++    L+ +      ++      ++  G+G S  I               +F
Sbjct: 105 RNILSLENT-NKLLNMEVLSTCLELIDAADNLIFFGMGASLLIARDACLKFVRVNKSCYF 163

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                         T  D++I +S+SG + E       A++   P+IAIT    S +   
Sbjct: 164 GDDWHMQLLHAKNSTERDVVIAISYSGVTMETIKCAEIAKKNGTPVIAITRFEPSKLVKL 223

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           AD  L +         G    +S I Q  I D L  A +  
Sbjct: 224 ADYSLYVATIELFSRMGA--MSSRIAQSNIIDILYSAYVNK 262


>gi|40890017|pdb|1VIV|A Chain A, Crystal Structure Of A Hypothetical Protein
 gi|40890018|pdb|1VIV|B Chain B, Crystal Structure Of A Hypothetical Protein
          Length = 197

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 71/187 (37%), Gaps = 12/187 (6%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L++       L+ L +S     + +     + I +   ++   G G+SG +    A  L 
Sbjct: 3   LKTTEYVAEILNELHNSAAYISNEEADQLADHILSSH-QIFTAGAGRSGLMAKSFAMRLM 61

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +  V            +   DL+I+ S SG +  L      A+     + A+T  
Sbjct: 62  HMGFNAHIVGEILTPP-----LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTIN 116

Query: 148 NKSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSE 201
            +S +   AD+++ +P  P+   +G    + P  S   Q      DA+ + L+E +    
Sbjct: 117 PESSIGKQADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDS 176

Query: 202 NDFYVLH 208
              +  H
Sbjct: 177 ETMFTHH 183


>gi|307130898|ref|YP_003882914.1| putative DNA-binding transcriptional regulator [Dickeya dadantii
           3937]
 gi|306528427|gb|ADM98357.1| predicted DNA-binding transcriptional regulator [Dickeya dadantii
           3937]
          Length = 289

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +   GL  ++S L  +     + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVEEDDSVESYTSKIFESTMAGLEHVKSCLDIQ---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   + ++   G G S  +     +       P  +                 D+++++S
Sbjct: 125 LTQAR-KISFFGFGASAAVAHDAMNKFFRFNIPVVYFDDLVMQRMSCMNSGEGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IAITS+  S ++  A + L +    ++  +   P  S 
Sbjct: 184 HTGRTKSLVDMARLARENDATVIAITSDG-SPLSREASLTLRVEVPEDTDVY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           I QL + D LA      R     D
Sbjct: 241 IAQLTLIDVLATGFTLRRGAKFRD 264


>gi|297162506|gb|ADI12218.1| hypothetical protein SBI_09100 [Streptomyces bingchenggensis BCW-1]
          Length = 222

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 20/141 (14%)

Query: 217 FVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               S ++    +  +V +G   P  + +  L + +   + V++   ++ G+++E D+  
Sbjct: 1   MHRTSHIVSDVMTHTVVAVGREAPFKEIVKTLEQWKVSALPVLEGEGRVIGVVSEADLLP 60

Query: 275 NFH------------KDLNTL------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                          +DL  +      + +++M      +  +  L    +++    +  
Sbjct: 61  KEEFRDSDPIRLGQLRDLPDIVKAGAVTADELMTSPAITVHANATLAETARIMTHRRVKR 120

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VVDD  +  GIV   DLL+
Sbjct: 121 LPVVDDEGRLEGIVSRADLLK 141



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 14/85 (16%), Positives = 30/85 (35%), Gaps = 7/85 (8%)

Query: 201 ENDFYVLHPGGKLGTL-------FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           + +F    P                  +           V     L +   I++ +R   
Sbjct: 61  KEEFRDSDPIRLGQLRDLPDIVKAGAVTADELMTSPAITVHANATLAETARIMTHRRVKR 120

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHK 278
           + VVD+  +L+GI++  D+ + F +
Sbjct: 121 LPVVDDEGRLEGIVSRADLLKVFLR 145


>gi|88797052|ref|ZP_01112642.1| cyclic nucleotide binding protein/2 CBS domains [Reinekea sp.
           MED297]
 gi|88779921|gb|EAR11106.1| cyclic nucleotide binding protein/2 CBS domains [Reinekea sp.
           MED297]
          Length = 651

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 55/145 (37%), Gaps = 16/145 (11%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK--- 262
           VLH         V   D++        +     + +    ++E+R   V V D+      
Sbjct: 159 VLHQADDNDMTTVRVRDIV--QREPVYLDADATVHECAQKMTEQRVSSVVVFDQVGDHED 216

Query: 263 --------LKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                     GI+T+ D+  R   + L     + D+M  +   +  D  +  AM L+ +H
Sbjct: 217 RDGDAVHLPAGIVTDRDLRMRVIAEALPYDTPLRDIMSTDLITVGHDAYVYEAMLLMLRH 276

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR 337
           N+  L +V    +   +V   D++R
Sbjct: 277 NVHHLPLV-RRHQVTAVVALSDIVR 300


>gi|311279246|ref|YP_003941477.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308748441|gb|ADO48193.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 289

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+   Q       + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLDHVRQSLDMAAVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     +IA+TS   + +A  A
Sbjct: 161 DDIVLQRMSCMNCNDDDVVVLISHTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + + L    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLAINLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|302872663|ref|YP_003841299.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor obsidiansis OB47]
 gi|302575522|gb|ADL43313.1| putative signal transduction protein with CBS domains
           [Caldicellulosiruptor obsidiansis OB47]
          Length = 123

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     +VDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PTDTVKFALEQMQKRKKSVAVIVDENDFLKGIIVKADIYRFLSQPGHYETYPVELAMTKA 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+++IS + V+DD  K IG++   D++
Sbjct: 75  VITADKNDDIKDVAKLLRENDISAVPVLDD-GKVIGLIGLEDIV 117


>gi|257871084|ref|ZP_05650737.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus gallinarum EG2]
 gi|257805248|gb|EEV34070.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus gallinarum EG2]
          Length = 443

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 37/200 (18%), Positives = 74/200 (37%), Gaps = 15/200 (7%)

Query: 141 LIAITSENKSVVACH--ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +I         +A    A +++T   E       LA      +     D   +A + +R 
Sbjct: 119 VIVGNRNEVHQLALEDGAAVLITGGFETSEENCRLADKLELPILQTTYDTFTVATMINRA 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S+           +    +  SD+    +    +     + D   +  E       VV+
Sbjct: 179 LSD---------QLIKKDIMLVSDIYMPLEKTKYLHTFDTVKDYKRLSEETNHSRYPVVN 229

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +  ++ GIIT  D+        +T  +E +M + P+V+ ++  +  A   +    + V+ 
Sbjct: 230 KNMRVVGIITAKDVLEK----PDTQIIERIMTREPRVVKKEMSVASASHQMIWDGLEVMP 285

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV D    IGIV   D+++ 
Sbjct: 286 VVADDLSLIGIVTRQDIMKA 305



 Score = 36.0 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +VK    +  A   +       + VV +   L GI+T  DI +          +
Sbjct: 256 MTREPRVVKKEMSVASASHQMIWDGLEVMPVVADDLSLIGIVTRQDIMKAMQLVQRQTQI 315

Query: 286 ED 287
            D
Sbjct: 316 SD 317


>gi|300869423|ref|ZP_07114008.1| hypothetical protein OSCI_4080002 [Oscillatoria sp. PCC 6506]
 gi|300332553|emb|CBN59206.1| hypothetical protein OSCI_4080002 [Oscillatoria sp. PCC 6506]
          Length = 1748

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 31/115 (26%), Positives = 52/115 (45%), Gaps = 12/115 (10%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVD------EGQKLKGIITEGDIFRNFHKD--LNTL 283
           +V     ++ AI  + E     V VV+      E   L GI+TE DI R   +   L+ L
Sbjct: 23  MVSPDLTVMAAIASMREAGCSYVLVVESSGTHPENSGLVGIVTERDIVRIITQSTPLDQL 82

Query: 284 SVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ VM      + +  L  +   + L +QH I  L V+ +  + IG++   D+L
Sbjct: 83  PIQSVMSHPVITVQDFALSDIKAVLTLFQQHQICHLPVL-NGDRIIGLLT-KDIL 135



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK------AIGIVHFLDLLRF 338
            NP ++  D  +  A+  +R+   S ++VV+           +GIV   D++R 
Sbjct: 19  PNPLMVSPDLTVMAAIASMREAGCSYVLVVESSGTHPENSGLVGIVTERDIVRI 72


>gi|282163366|ref|YP_003355751.1| hypothetical protein MCP_0696 [Methanocella paludicola SANAE]
 gi|282155680|dbj|BAI60768.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 138

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               I  V       DA   + ++  G V VVDE  ++KG++T+  I        ++   
Sbjct: 7   MTTGIACVDSRSSAADAAKKMKDQNVGTVLVVDEN-QVKGLVTDRAIVTKVVAEQQNPKD 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V +VM K      E   +  A++ +    +  L VV+D  + +G+V   D+ + 
Sbjct: 66  VPVGNVMTKQVVGCRESDDILEAVKTMGDMKVRRLPVVNDRDQLVGVVSLADIAQE 121



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+DVM      +   +    A + ++  N+  ++VVD+  +  G+V 
Sbjct: 1   MQVKDVMTTGIACVDSRSSAADAAKKMKDQNVGTVLVVDE-NQVKGLVT 48


>gi|126668434|ref|ZP_01739391.1| inosine-5'-monophosphate dehydrogenase [Marinobacter sp. ELB17]
 gi|126627143|gb|EAZ97783.1| inosine-5'-monophosphate dehydrogenase [Marinobacter sp. ELB17]
          Length = 487

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/173 (23%), Positives = 64/173 (36%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H              V         
Sbjct: 41  NIPLVSAAMDTVTDAELAIAMAQEGGIG-----IMHKNMSAEQQAAAVRKVKKFESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               VK    + + + I        + VVD G +L GI+T  DI   F   ++TL V D+
Sbjct: 96  DPITVKPENTVRELVEITMANNISGLPVVD-GSELVGIVTGRDIR--FESSMDTL-VRDI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E   L    +LL +H I  ++VV+D  +  G+V   D+ +  
Sbjct: 152 MTPKEKLVTVKEGADLESVKELLHRHRIEKVLVVNDNFQLRGLVTAKDIQKSK 204


>gi|10697120|emb|CAC12687.1| hypothetical protein [Thauera aromatica]
          Length = 223

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 52/118 (44%), Gaps = 14/118 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
              +  ++     L +A  I SE     + VVD+  +L+G+IT     R  H  L T   
Sbjct: 7   MQTNPIVLTGDTLLSEAKRIFSEANIHALPVVDD-GRLRGLITRAGCLRAAHAALRTQDT 65

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                      V+D+M++NP  I  D  +   +Q+ ++H +  L V+D     +GI+ 
Sbjct: 66  DELNYFSNRVKVKDIMVRNPATIDADDTMEHCLQVGQEHGVGQLPVMDKGN-VVGIIS 122



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  NP V+  DTLL+ A ++  + NI  L VVDD  +  G++     LR 
Sbjct: 3   VRNWMQTNPIVLTGDTLLSEAKRIFSEANIHALPVVDD-GRLRGLITRAGCLRA 55


>gi|18313077|ref|NP_559744.1| hypothetical protein PAE2072 [Pyrobaculum aerophilum str. IM2]
 gi|18160583|gb|AAL63926.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 138

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
                + +  T L++ R G   +   D  ++   +++E DI R   + L+       +  
Sbjct: 16  PETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIAN 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +P  +L+   + VA + +R+HNI  ++VV+   + +G++   DL
Sbjct: 76  SPITVLDTDPVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 119


>gi|311279908|ref|YP_003942139.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308749103|gb|ADO48855.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 283

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 73/193 (37%), Gaps = 5/193 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K      +S+ K+ +++     +I EK   +++E +            ++ I +    + 
Sbjct: 81  KHKKHLHNSIEKSDSLEVIAGKLIREKH--TAIEETTNNINFHNLREIIKVIHSA-NHIQ 137

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           ITGIG S      LA  L   G        +         +   D+ I +S+SG   E+ 
Sbjct: 138 ITGIGGSALTAKDLAFKLMKIGYRVTCEIDSHVQITVAQALRHQDVQIAISYSGRKKEIL 197

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
                A+     +IAIT+  ++ +   AD  L      +      +  +S   Q  I D 
Sbjct: 198 VAAAAAKERGAKIIAITTLAQNQLQKLADYTLETISNEDEWR--SSSISSRTAQNCITDL 255

Query: 189 LAIALLESRNFSE 201
           L ++LL+  +   
Sbjct: 256 LFVSLLQINDLRS 268


>gi|147919881|ref|YP_686368.1| hypothetical protein RCIX1863 [uncultured methanogenic archaeon
           RC-I]
 gi|110621764|emb|CAJ37042.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 193

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 5/95 (5%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIKNPKVILEDTL 301
            ++  R GCV VV +  +  GI+TE D+  +   K+L  +T+  E++M      +  D  
Sbjct: 30  KMAAARTGCVIVVRDT-QPVGIVTERDLVVKVVSKNLQPSTVKAEELMSTPLITVTPDKS 88

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +A + + +H I  L VV   +K +GIV   DLL
Sbjct: 89  TELASREMVRHRIRRLPVV-QGRKLVGIVTDSDLL 122



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 21/55 (38%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +SV DVM +                 +       ++VV D Q  +GIV   DL+
Sbjct: 4   DISVSDVMSRKLITADVSETAETIGGKMAAARTGCVIVVRDTQ-PVGIVTERDLV 57



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 20/55 (36%), Gaps = 1/55 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                      +  V        A   +   R   + VV +G+KL GI+T+ D+ 
Sbjct: 69  TVKAEELMSTPLITVTPDKSTELASREMVRHRIRRLPVV-QGRKLVGIVTDSDLL 122


>gi|326381571|ref|ZP_08203265.1| putative CBS domain-containing signal transduction protein
           [Gordonia neofelifaecis NRRL B-59395]
 gi|326199818|gb|EGD56998.1| putative CBS domain-containing signal transduction protein
           [Gordonia neofelifaecis NRRL B-59395]
          Length = 142

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 4/121 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KD 279
           +   G  +  V+ G  +   +  L E   G V V+ +G  L GI++E DI R  H     
Sbjct: 7   LGKKGSGVITVRAGSTVRSLLATLDEWNIGAVVVIGDGGTLAGIVSERDIVRRLHSGGAG 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    V  +M     V   D  +      + +H +  L V+D   + +GI+   D+++  
Sbjct: 67  VLDGPVSAIMTPVVHVCAPDDPIEGLRDTMTEHRVRHLPVLD-AGELVGIISIGDVVKSA 125

Query: 340 I 340
           I
Sbjct: 126 I 126


>gi|323350012|gb|EGA84190.1| Imd2p [Saccharomyces cerevisiae VL3]
          Length = 523

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 16/166 (9%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-K 234
           T +          L        N +  D            +     +  +   + P+V  
Sbjct: 79  TVTESEMATFMALLGGIGFIHHNCTPEDQA---------DMVRRVKNYENGFINNPIVIS 129

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
               + +A ++  +  F    V  +G+   KL G+ T  DI   F +D + L V+DVM K
Sbjct: 130 PTTTVGEAKSMKEKYGFAGFPVTXDGKRNAKLVGVXTSRDI--QFVEDXSLL-VQDVMTK 186

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           NP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 187 NPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 232


>gi|291295002|ref|YP_003506400.1| peptidase M50 [Meiothermus ruber DSM 1279]
 gi|290469961|gb|ADD27380.1| peptidase M50 [Meiothermus ruber DSM 1279]
          Length = 380

 Score = 72.6 bits (177), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + + +  +  +R     VV E  +L G+I+  D+    H       V
Sbjct: 252 MTREVSTVPPSLTVAELLEKMMLERHVGYPVV-EEGRLLGLISLEDL----HGASPQTRV 306

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + M + P  + +DT    A+Q + +   S L+V D+    IGI+   DLLR 
Sbjct: 307 LERM-RPPLQVNQDTEALAALQRMAEQGFSRLLVTDEQGHLIGILSKTDLLRA 358



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 28/66 (42%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            V+        V      + A+  ++E+ F  + V DE   L GI+++ D+ R       
Sbjct: 305 RVLERMRPPLQVNQDTEALAALQRMAEQGFSRLLVTDEQGHLIGILSKTDLLRALQLRAA 364

Query: 282 TLSVED 287
            +S+ D
Sbjct: 365 QMSLSD 370



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 10/64 (15%), Positives = 28/64 (43%), Gaps = 3/64 (4%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ-LLRQHNISVLMVVDDCQKAIGIVHFLD 334
             + L  L V D+M +    +     +   ++ ++ + ++    VV++  + +G++   D
Sbjct: 239 LSRTLEGLWVRDLMTREVSTVPPSLTVAELLEKMMLERHVGY-PVVEE-GRLLGLISLED 296

Query: 335 LLRF 338
           L   
Sbjct: 297 LHGA 300


>gi|283788367|ref|YP_003368232.1| transcriptional regulator [Citrobacter rodentium ICC168]
 gi|282951821|emb|CBG91531.1| putative transcriptional regulator [Citrobacter rodentium ICC168]
          Length = 287

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 64/166 (38%), Gaps = 3/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S L+++ +   +     AV  +   +  + I   G S     ++   L   G P     
Sbjct: 102 ISVLDTNRRALQTKSISQAVSWLNQARQILAIGTGGGSTICAQEIQYRLFRLGLPVVSQS 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A         +   D++I LS  G + E+      AR++   +IAIT   ++ +   AD
Sbjct: 162 DALMMRMMCSAVAPQDVVIALSLGGYTPEILESAAIARQYGAKVIAITP-PETPLTEQAD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L  E        +P  S    LA+ D LA  L  +      D
Sbjct: 221 LVLPLIVEENDYIFKPSP--SRYAMLAMVDVLATELAMTNKAQAKD 264


>gi|148643114|ref|YP_001273627.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
 gi|148552131|gb|ABQ87259.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
          Length = 312

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + D I  +   + G + +VD   KL GI+TE DI  +    L     +D M       
Sbjct: 125 SSIKDTIETMLSNQIGAIPLVDANDKLAGIVTERDIVLSLAGVLTEEVAQDYMSTKVFTT 184

Query: 297 LEDTLLTVAMQLLRQHNISVLMVV-------DDCQKAIGIVHFLDLLRF 338
              T +  A +++ ++ +  + +V          +K +GIV   D++R+
Sbjct: 185 TPGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRY 233



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           +     + D   ++ E  F  + + D G  K+ GI+T  DI   F               
Sbjct: 41  IPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDILDFFGGGKKFNIIEKKYED 100

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    + ++M ++   + + + +   ++ +  + I  + +VD   K  GIV   D+
Sbjct: 101 NFLAAINEPIREIMTRDVICLSDKSSIKDTIETMLSNQIGAIPLVDANDKLAGIVTERDI 160

Query: 336 L 336
           +
Sbjct: 161 V 161



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 21/124 (16%)

Query: 235 IGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHK-----DLNT 282
            G P+  A  I+       + +V          +KL GI+T  DI R F+      +LN+
Sbjct: 186 PGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRYFNAKELFDNLNS 245

Query: 283 LSVEDV--------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  +V        M ++P  + +   +     L  + NI  + V  D +  IGI+   D
Sbjct: 246 NAASEVLKNIVSNIMAEDPITVSQTERIGDICALFAEKNIGGVPVTKDSE-IIGIITEKD 304

Query: 335 LLRF 338
           +L  
Sbjct: 305 ILNA 308



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           +  +  K+   I     +    +++ +H    L + D    K +GIV  +D+L
Sbjct: 30  IMAIASKDVISIPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDIL 82


>gi|40217437|emb|CAE46370.1| conserved hypothetical protein [uncultured archaeon]
 gi|268323820|emb|CBH37408.1| conserved hypothetical protein, CBS domain pair containing
           [uncultured archaeon]
          Length = 272

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +      + E   G V +   G K  G++T+ DI        K  + +  +D+M
Sbjct: 154 VDEDTVVSKISKDMEESEIGSVVIT-RGGKPVGMVTDRDIASKVIMEDKKASEIKAKDIM 212

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 I  D  +  A  ++   +I  + V+D+  K +GI+   ++L
Sbjct: 213 SSPLITIGPDASVEKACGIMAAKDIRRMPVMDED-KLVGIISVRNIL 258



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIK 291
               +      +     G V +  E  K  GI+T+ DI       + T   ++ + +M  
Sbjct: 17  EDTSVTIIARDMELSEIGSVVITRED-KPVGIVTDRDISIKICAKMGTPGEVTAKGIMTS 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +  A +LL + +I  L V+++  K +GI+   ++L
Sbjct: 76  PLITIGPEAPVETACELLAETDIRRLPVMEND-KLVGIISVRNIL 119



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +        +  +    P+  A  +L+E     + V+ E  KL GII+  +I     + 
Sbjct: 67  VTAKGIMTSPLITIGPEAPVETACELLAETDIRRLPVM-ENDKLVGIISVRNILTGAPEY 125

Query: 280 LN------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +              L V DVM      + EDT+++   + + +  I   +V+    K +
Sbjct: 126 VQRFYPAEGELVPEQLEVGDVMTLEVITVDEDTVVSKISKDMEESEIGS-VVITRGGKPV 184

Query: 328 GIVHFLDLLRFGII 341
           G+V   D+    I+
Sbjct: 185 GMVTDRDIASKVIM 198



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+DVM        EDT +T+  + +    I  +++  +  K +GIV   D+
Sbjct: 2   MKVKDVMSSPVITEDEDTSVTIIARDMELSEIGSVVITRED-KPVGIVTDRDI 53


>gi|326315657|ref|YP_004233329.1| CBS domain-containing membrane protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323372493|gb|ADX44762.1| CBS domain containing membrane protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 383

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 21/124 (16%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------------- 282
           G  L +A  ++  +R   + VVD  +++ GI+T  D  R    D++              
Sbjct: 254 GTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHQGIGEQLRALVRRV 313

Query: 283 --------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     V  +M +  +V+ E       + L  +     + V+D  ++ +GI+   D
Sbjct: 314 GAVHSTKPEVVGQIMTRQVRVVSEQRPALELVPLFTEDGHHHIPVIDAERRLVGIITQSD 373

Query: 335 LLRF 338
           L+R 
Sbjct: 374 LVRA 377



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             + ++   L   D+M + P      T L  A  L+R+  I  L VVD  ++ +GIV   
Sbjct: 229 EAYRRNFGQLRCGDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTA 288

Query: 334 DLLR 337
           D +R
Sbjct: 289 DFMR 292



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           I L   +   E    ++   G + +        + +   + +V    P ++ + + +E  
Sbjct: 294 IDLDVHQGIGEQLRALVRRVGAVHSTKPEVVGQIMTRQ-VRVVSEQRPALELVPLFTEDG 352

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
              + V+D  ++L GIIT+ D+ R  H+ + 
Sbjct: 353 HHHIPVIDAERRLVGIITQSDLVRALHRAVR 383


>gi|28373644|pdb|1ME8|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Rvp Bound
 gi|34810632|pdb|1ME9|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Imp Bound
 gi|34810633|pdb|1MEH|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh) From
           Tritrichomonas Foetus With Imp And Moa Bound
          Length = 503

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 71/186 (38%), Gaps = 21/186 (11%)

Query: 155 HADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
            +++ L+ P     K  +S  +   P  SAIMQ   G+ +AIAL      S    ++   
Sbjct: 28  PSNVNLSTPLVKFQKGQQSEINLKIPLVSAIMQSVSGEKMAIALAREGGIS----FIFG- 82

Query: 210 GGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QK 262
              + +       V +      +    VK      D + I        VAV D+G     
Sbjct: 83  SQSIESQAAMVHAVKNFKAGFVVSDSNVKPDQTFADVLAISQRTTHNTVAVTDDGTPHGV 142

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L G++T+ D             V D+M          +DT L+ A +++ +  ++ L ++
Sbjct: 143 LLGLVTQRDY--PIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPII 200

Query: 321 DDCQKA 326
           DD Q  
Sbjct: 201 DDDQHL 206


>gi|134298880|ref|YP_001112376.1| diguanylate cyclase [Desulfotomaculum reducens MI-1]
 gi|134051580|gb|ABO49551.1| diguanylate cyclase [Desulfotomaculum reducens MI-1]
          Length = 283

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 11/109 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +   + ++ + + G + V+ E ++L GIIT  D+ +     L    V D M + 
Sbjct: 15  ISPFDSVGRVVNVMEKHKIGGLPVL-ENKRLVGIITSRDVRKAHPNRL----VADAMSRE 69

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++    L  A +L+  H I  L+V+ +    +G++      + G+I
Sbjct: 70  VVTVMPQFSLWQAKELMENHCIERLVVLKED-YPVGLIT-----KSGLI 112



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE +MI+    I     +   + ++ +H I  L V+ + ++ +GI+   D+ + 
Sbjct: 4   VEQIMIRELITISPFDSVGRVVNVMEKHKIGGLPVL-ENKRLVGIITSRDVRKA 56


>gi|134299617|ref|YP_001113113.1| putative PAS/PAC sensor protein [Desulfotomaculum reducens MI-1]
 gi|134052317|gb|ABO50288.1| putative PAS/PAC sensor protein [Desulfotomaculum reducens MI-1]
          Length = 698

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 6/107 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
                + + +TI    +     VVD+  KL G+ T+  I+R  +   D+N   V+D+M K
Sbjct: 9   NPSQKVSEVVTIFMGNKIDGAPVVDKSGKLVGLFTKSHIYRVINNGLDMNKTKVKDLMTK 68

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  D   +  +      ++  L V+D+  + +GIV   D+ + 
Sbjct: 69  QLLTGHPDDEFSDVINA----SVPRLPVIDEKGRVVGIVTRGDIAKA 111



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 7/43 (16%), Positives = 15/43 (34%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M      +     ++  + +   + I    VVD   K +G+  
Sbjct: 1   MTSPVLTLNPSQKVSEVVTIFMGNKIDGAPVVDKSGKLVGLFT 43


>gi|227509035|ref|ZP_03939084.1| 3-hexulose-6-phosphate isomerase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
 gi|227191512|gb|EEI71579.1| 3-hexulose-6-phosphate isomerase [Lactobacillus brevis subsp.
           gravesensis ATCC 27305]
          Length = 180

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + + G +  Q     E +     R+ + G G+SG +    A  L   G   + +      
Sbjct: 12  NQVMGMIDEQQLKDAEGVIQKDKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYAIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG +  +  +   A+   + ++A+TS + S +    D+ + +
Sbjct: 72  -----SIQAGDVLVAVSGSGKTSSILELTEKAKNDGVKVVAVTSHSDSPLGKLGDVTIVV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           P   ++        L  T          D L + L    + S +     H
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQSVHITLDVLCLMLSRRDHVSNDTAKATH 176


>gi|325969608|ref|YP_004245800.1| CBS domain containing protein [Vulcanisaeta moutnovskia 768-28]
 gi|323708811|gb|ADY02298.1| CBS domain containing protein [Vulcanisaeta moutnovskia 768-28]
          Length = 385

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 33/126 (26%), Positives = 52/126 (41%), Gaps = 3/126 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L       S V  +      +     LI A+  +   +   + VVD G  L GI+T   I
Sbjct: 57  LERRISLKSKVSSAMSPPYSINQDSDLIKAMAKILTLKVRALPVVDSGMNLVGILTREKI 116

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     K L  ++V  +M K    I  +  +  A  L+ +H I+ L V++   K  GIV
Sbjct: 117 LRYLVNGKLLPRITVSSIMSKPAITIDANEAVARAKWLMIRHGITRLPVLESS-KLYGIV 175

Query: 331 HFLDLL 336
              D++
Sbjct: 176 SMRDIV 181



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
              +I + K    +   I+ + + +   V V++E  KL G ++  D+     + ++    
Sbjct: 10  MDHAIVIAKPKDIVSKIISDMKDYKVWVVPVINENGKLVGTLSYRDL---LERRISLKSK 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V   M   P  I +D+ L  AM  +    +  L VVD     +GI+    +LR+
Sbjct: 67  VSSAMSP-PYSINQDSDLIKAMAKILTLKVRALPVVDSGMNLVGILTREKILRY 119



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 21/143 (14%), Positives = 45/143 (31%), Gaps = 19/143 (13%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G L    +           +     +  A  ++       + V+ E  KL GI++  DI
Sbjct: 122 NGKLLPRITVSSIMSKPAITIDANEAVARAKWLMIRHGITRLPVL-ESSKLYGIVSMRDI 180

Query: 273 FRNF-----------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                                  D+     + +       + E   +  A+ L+    IS
Sbjct: 181 VERLYYASIPRRSRRGDVVGTEDDILAAPAKAIATTPVITVSESDDVYTAVNLMLDKGIS 240

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            + V+   +  +G++   D++R 
Sbjct: 241 GMPVI-SGESVVGVISSYDVIRA 262



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 28/56 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V ++M     +     +++  +  ++ + + V+ V+++  K +G + + DLL   I
Sbjct: 6   VSELMDHAIVIAKPKDIVSKIISDMKDYKVWVVPVINENGKLVGTLSYRDLLERRI 61


>gi|302388098|ref|YP_003823920.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
 gi|302198726|gb|ADL06297.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
          Length = 285

 Score = 72.2 bits (176), Expect = 9e-11,   Method: Composition-based stats.
 Identities = 44/183 (24%), Positives = 69/183 (37%), Gaps = 4/183 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K+ + SLE++ Q  +  +      K+      V + G+G S      L   L        
Sbjct: 104 KKNIESLETT-QKLIEPKVVTECVKLLESSRSVTLFGLGTSLLAARDLYLKLLRADVICN 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                         + RDDL I +S+SG ++E+   +  A+     +IAIT   +S +A 
Sbjct: 163 VCDDWHTQLLAARNLRRDDLAIAISYSGLTEEILQCVKEAKGNGAKVIAITRAVESELAL 222

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKL 213
            AD VL  P       H     +S I QL + D    A +     +  N F   +   K 
Sbjct: 223 EADFVL--PVAATELIHRSGAMSSRISQLNVIDIFFTAYVNRNYETCINKFSKNYIQKKG 280

Query: 214 GTL 216
            T 
Sbjct: 281 STE 283


>gi|332291592|ref|YP_004430201.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Krokinobacter diaphorus 4H-3-7-5]
 gi|332169678|gb|AEE18933.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Krokinobacter diaphorus
           4H-3-7-5]
          Length = 636

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 46/109 (42%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMI 290
                 + +A  ++ + R GC+ +        G++T  ++      ++  +   V D MI
Sbjct: 177 CSPETSIQEAARLMQQHRIGCLVITV-NAVPVGVLTNRELRNAIANNIISSDHVVGDAMI 235

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIVHFLDLL 336
                 +    +  A  +L ++ IS L++ +D     K +G++   D++
Sbjct: 236 TQVVCAVTKVTVAQAQLILLKNGISHLIITEDGTASTKVVGLLSKHDIV 284



 Score = 41.8 bits (97), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +T +  A +L++QH I  L V+      +G++ 
Sbjct: 175 ITCSPETSIQEAARLMQQHRIGCL-VITVNAVPVGVLT 211


>gi|295663935|ref|XP_002792520.1| inosine-5'-monophosphate dehydrogenase IMD2 [Paracoccidioides
           brasiliensis Pb01]
 gi|226279190|gb|EEH34756.1| inosine-5'-monophosphate dehydrogenase IMD2 [Paracoccidioides
           brasiliensis Pb01]
          Length = 548

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 44/230 (19%), Positives = 80/230 (34%), Gaps = 27/230 (11%)

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVA-----CHADIVLTLPKEPESCPHGLA 174
           +SG   ++  ++   +R      A+T  +  ++        +D+ L  P          A
Sbjct: 36  YSGDGLDINELINSDKRG-----ALTYNDFLILPGYIGFPASDVSLETPVTKRITL--KA 88

Query: 175 PTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSI 230
           P  S+ M      ++AI +            V+H              V           
Sbjct: 89  PLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADDQAEMVRKVKRYENGFILEP 143

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +A T+  +  FG   V ++G    KL G+IT  DI  +   D     V  
Sbjct: 144 VVISPKTTVAEAKTLKEKWGFGGFPVTEDGTLPSKLIGMITSRDIQFHTAGD---DPVTT 200

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  +       T L  A ++LR      L +VD     + ++   DL++
Sbjct: 201 VMSTDLITAPSGTTLAEANEVLRSSKKGKLPIVDSEGNLVSLLSRSDLMK 250


>gi|225424725|ref|XP_002265656.1| PREDICTED: hypothetical protein [Vitis vinifera]
          Length = 385

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 4/108 (3%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
           ++  G  + DA  ++S ++   V + D    L GI+ + DI  R   ++L     +V  +
Sbjct: 112 MIPEGITVSDACRMMSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKI 171

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M ++P ++  D+L   A++ + Q     L +  +  + I ++ F   L
Sbjct: 172 MTRHPILVNSDSLAIEALEKMVQGKFRHLPIA-ENGEVIALLDFTKCL 218


>gi|163801118|ref|ZP_02195018.1| DNA-binding transcriptional regulator HexR [Vibrio sp. AND4]
 gi|159175467|gb|EDP60264.1| DNA-binding transcriptional regulator HexR [Vibrio sp. AND4]
          Length = 284

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + +D+++++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCSDNDVVVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +TL    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LAITLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|172058378|ref|YP_001814838.1| 6-phospho 3-hexuloisomerase [Exiguobacterium sibiricum 255-15]
 gi|171990899|gb|ACB61821.1| 6-phospho 3-hexuloisomerase [Exiguobacterium sibiricum 255-15]
          Length = 182

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 70/177 (39%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L S+++     +     E +     R+ + G G+SG +G      L      ++ V 
Sbjct: 8   LQELTSTVEAIDQAETTQLAEAVLKAD-RIFLAGAGRSGLMGKAFVMRLMHMNFDAYVVG 66

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
               ++     +   DL+I+ S SG +  L  I+  A++    +  +T E  S +A  AD
Sbjct: 67  ETVTAN-----LREGDLLIIGSGSGETKTLVPIVEKAKQIGGTVAVVTIEPTSTLAKLAD 121

Query: 158 IVLTLPKEPESCP----HGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
           + + LP  P+         + P  S   Q      DAL + ++ ++       Y  H
Sbjct: 122 LTVKLPGVPKERTATADETVQPMGSLFEQTMLLFYDALILHIMAAKQLDSQTMYGKH 178


>gi|269963413|ref|ZP_06177740.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
 gi|269831813|gb|EEZ85945.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
          Length = 284

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     S Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDSMQVNRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCSDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +TL    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LAITLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|205374486|ref|ZP_03227282.1| acetoin dehydrogenase [Bacillus coahuilensis m4-4]
          Length = 216

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 48/108 (44%), Gaps = 9/108 (8%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------HKDLNTLSVEDV 288
             +  AI +++EK+   + V+++  ++ GI+++ D+              +     V+ +
Sbjct: 18  DTIQHAIRLMNEKKIRHLPVINDQNEVIGIVSDRDLKDAAPSILSATSSDEELQKPVKLI 77

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           MI++        L+  A  L   + I  L +V   QK IG++   D L
Sbjct: 78  MIEDVIYGHPLDLIEEAAALFYDYQIGCLPIV-KDQKLIGMITAKDAL 124



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M K+  V+ E   +  A++L+ +  I  L V++D  + IGIV   DL
Sbjct: 3   VEEIMNKDVAVLYEWDTIQHAIRLMNEKKIRHLPVINDQNEVIGIVSDRDL 53


>gi|167572796|ref|ZP_02365670.1| HPP family protein [Burkholderia oklahomensis C6786]
          Length = 370

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/66 (37%), Positives = 33/66 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + +  + LS  D+M +    I  DT L  AM LL +H I  L VVD   + +GIV  
Sbjct: 214 LRAYARTFDELSCADIMTRPAISIAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTR 273

Query: 333 LDLLRF 338
            DL R 
Sbjct: 274 ADLSRA 279



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/125 (24%), Positives = 47/125 (37%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT--- 282
           +    PL  A+T+L   R   + VVD   ++ GI+T  D+ R          + L+    
Sbjct: 237 IAPDTPLPAAMTLLDRHRIKALPVVDANARVVGIVTRADLSRAAPYATPGLLRSLSARLP 296

Query: 283 -------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                       VM      +   T +   + L   H    + VVD  Q+  GIV   DL
Sbjct: 297 RSLVGPAFVARAVMSARVHTVRTTTPIAELVPLFADHGHHHIPVVDADQRLAGIVTQADL 356

Query: 336 LRFGI 340
           +  G+
Sbjct: 357 I-AGL 360



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 26/53 (49%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V+   P+ + + + ++     + VVD  Q+L GI+T+ D+    ++
Sbjct: 310 MSARVHTVRTTTPIAELVPLFADHGHHHIPVVDADQRLAGIVTQADLIAGLYR 362


>gi|227524929|ref|ZP_03954978.1| 3-hexulose-6-phosphate isomerase [Lactobacillus hilgardii ATCC
           8290]
 gi|227087917|gb|EEI23229.1| 3-hexulose-6-phosphate isomerase [Lactobacillus hilgardii ATCC
           8290]
          Length = 180

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + + G +  +     E +     R+ + G G+SG +    A  L   G   + +      
Sbjct: 12  NQVMGMIDEKQLKDAESVIQKDKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYAIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG +  +  +   A+   + ++A+TS + S +    D+ + +
Sbjct: 72  -----SIQAGDVLVAVSGSGKTSSILELTEKAKNDGVKVVAVTSHSDSPLGKMGDVTIVV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           P   ++        L  T          D L + L    + S +     H
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQSVHITLDVLCLMLSRRDHVSNDTAKATH 176


>gi|298528247|ref|ZP_07015651.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans
           ASO3-1]
 gi|298511899|gb|EFI35801.1| NADH dehydrogenase (quinone) [Desulfonatronospira thiodismutans
           ASO3-1]
          Length = 774

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 3/116 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           +      +  +     + DAI  L ++    V VVD+  KL GI TE D+   ++K  + 
Sbjct: 650 LKSKPHVVITIYHDSTVADAIRTLHDRNVSSVFVVDDNAKLIGIFTERDVVHCYNKGFSC 709

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V  V  K+         ++ A+ +  ++    + +VD   + +G+V F DL+
Sbjct: 710 QDTPVGHVARKDLIKFEPSMGISSAILIASRNKKRHMPIVDGD-RILGMVTFRDLV 764


>gi|18978199|ref|NP_579556.1| hypothetical protein PF1827 [Pyrococcus furiosus DSM 3638]
 gi|18894010|gb|AAL81951.1| hypothetical protein PF1827 [Pyrococcus furiosus DSM 3638]
          Length = 279

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 32/140 (22%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------------- 274
           + +V  G PL+ A+  L       + V+D+  KL GI+ E D+ R               
Sbjct: 136 VSVVWRGTPLMAALKALLLSNAMALPVIDDDGKLIGIVDETDLLRDSEIVRIMKSTELAA 195

Query: 275 -----------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                             F   L    VED+M ++  V      +    + + ++ I  L
Sbjct: 196 SSEEEWILESHPTLLFEKFELKLPNKPVEDIMTRDVIVATPHMTVHEVARKMVKYKIEQL 255

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V+      +G++   DLL+
Sbjct: 256 PVIRGDGDLVGLIRDFDLLK 275



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/96 (21%), Positives = 49/96 (51%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ +  + +     VV++  KL GII+   +  N  ++   + V+    ++   +  D  
Sbjct: 23  ALELFRKHKVRSFPVVNKEGKLVGIISIKRVLTNVDEEQLAMLVK----RDVPTVKPDDT 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  A +L+ +++   ++V+D+  K +GI+   D++R
Sbjct: 79  LKKAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIR 114



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
              +P VK    L  A  ++ E  +  V V+DE  K  GI+T GDI R +    +    +
Sbjct: 67  KRDVPTVKPDDTLKKAAKLMLEYDYRRVVVIDEEGKPVGILTVGDIIRRYLAKSEKYKDV 126

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +E    +   V+   T L  A++ L   N   L V+DD  K IGIV   DLLR
Sbjct: 127 EIEPYYQRYVSVVWRGTPLMAALKALLLSNAMALPVIDDDGKLIGIVDETDLLR 180



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           + V+ +M  NP  I        A++L R+H +    VV+   K +GI+   
Sbjct: 1   MKVKTIMTPNPVTITLPATRNYALELFRKHKVRSFPVVNKEGKLVGIISIK 51


>gi|328943954|ref|ZP_08241419.1| inosine-5'-monophosphate dehydrogenase [Atopobium vaginae DSM
           15829]
 gi|327491923|gb|EGF23697.1| inosine-5'-monophosphate dehydrogenase [Atopobium vaginae DSM
           15829]
          Length = 539

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/201 (20%), Positives = 69/201 (34%), Gaps = 9/201 (4%)

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P  + +    S V+    +V     E  S      P  SAIMQ   G  LAIAL +   
Sbjct: 53  VPGYSSSKNIPSNVSLETPLVRYAKGEKPSITMH-IPMVSAIMQAVSGPRLAIALAQEGG 111

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S   +    P  +   +    S       S   +     L D + +        + V +
Sbjct: 112 ISF-IYGSQSPENEAQMVREVKSYKAGFVISDSTLTPDMTLADVLELKERTGHTTMPVTE 170

Query: 259 EG---QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHN 313
           +G    K  GI+T  D      +D     V + M    +       T L     ++ +  
Sbjct: 171 DGTPTGKFCGIVTSRDYR--VSRDEPQKPVREFMTAASDCITANARTSLKECNDIIWEQK 228

Query: 314 ISVLMVVDDCQKAIGIVHFLD 334
           ++ L +VDD    + +V   D
Sbjct: 229 VNQLPIVDDNGNLVSLVFRKD 249


>gi|190613393|pdb|2RIF|A Chain A, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613394|pdb|2RIF|B Chain B, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613395|pdb|2RIF|C Chain C, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613396|pdb|2RIF|D Chain D, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
           Complexed With Amp
 gi|190613397|pdb|2RIH|A Chain A, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
 gi|190613398|pdb|2RIH|B Chain B, Cbs Domain Protein Pae2072 From Pyrobaculum Aerophilum
          Length = 141

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 2/104 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
                + +  T L++ R G   +   D  ++   +++E DI R   + L+       +  
Sbjct: 19  PETATIREVATELAKNRVGLAVLTARDNPKRPVAVVSERDILRAVAQRLDLDGPAMPIAN 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +P  +L+   + VA + +R+HNI  ++VV+   + +G++   DL
Sbjct: 79  SPITVLDTDPVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDL 122


>gi|146280579|ref|YP_001170732.1| RpiR family transcriptional regulator [Pseudomonas stutzeri A1501]
 gi|145568784|gb|ABP77890.1| transcriptional regulator, RpiR family [Pseudomonas stutzeri A1501]
          Length = 256

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S    AL+        L  +   L  +       A+  +   + RV   G G SG + 
Sbjct: 56  NDSVADFALKIFDTTLHTLMEVRERLDPD---ALQRAITAMAKAE-RVEFYGFGASGAVA 111

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +            +               +   D+ I +S SG S +L       R    
Sbjct: 112 TDAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANVVRESGA 171

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LI +       +A  A I L +  + ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 172 TLITLCPSQT-PLAELATINLAIDVQEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 227


>gi|119871771|ref|YP_929778.1| signal-transduction protein [Pyrobaculum islandicum DSM 4184]
 gi|119673179|gb|ABL87435.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           islandicum DSM 4184]
          Length = 142

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTL-SVEDVMIKNP 293
             + DA  +++EK  G V +VD  +   + G+++E DI +    ++N L  VE +M    
Sbjct: 18  ASIRDAARVMAEKNVGLVVIVDPLDYSHIIGVVSERDIVKAVALNINPLEPVEKIMSTPV 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  +    + +R  N+   +VV    +  G++   DL+R 
Sbjct: 78  ITADVEEPIQNVARKMRVFNVRH-IVVTKEGRLYGVISIRDLIRE 121



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 11/58 (18%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLRF 338
           +   D+  + P +++    +  A +++ + N+ ++++VD  D    IG+V   D+++ 
Sbjct: 1   MKAGDLAKRPPVILINKASIRDAARVMAEKNVGLVVIVDPLDYSHIIGVVSERDIVKA 58


>gi|91975830|ref|YP_568489.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           BisB5]
 gi|91682286|gb|ABE38588.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 168

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 49/124 (39%), Gaps = 11/124 (8%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           H    +  V     + +         +    V+ E  +  G++T+ D    F        
Sbjct: 38  HMTRPVKSVSREMTMRELEDQFERDDYNAYPVL-EDSRAIGLVTKYDFLNCFAFHPTQML 96

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               DL   +V D+M  +   +  DT LT  +QL+ +H    + V+D  +K  GI+   D
Sbjct: 97  PHYDDLMNRTVGDIMTPDFIYVHADTKLTRVLQLMVEHQTRSIPVLDADRKLEGIISRED 156

Query: 335 LLRF 338
           +++ 
Sbjct: 157 VIKA 160



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 6/97 (6%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTL---FVCASDVMHSGDSIPLVKIGCPLI 240
            + D+ AI L+   +F  N F   HP   L             + + D I  V     L 
Sbjct: 69  VLEDSRAIGLVTKYDF-LNCFA-FHPTQMLPHYDDLMNRTVGDIMTPDFIY-VHADTKLT 125

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             + ++ E +   + V+D  +KL+GII+  D+ +   
Sbjct: 126 RVLQLMVEHQTRSIPVLDADRKLEGIISREDVIKALA 162


>gi|218885421|ref|YP_002434742.1| signal transduction protein with CBS domains [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218756375|gb|ACL07274.1| putative signal transduction protein with CBS domains
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 730

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 49/128 (38%), Gaps = 3/128 (2%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G+ G  +   +             +   L +A  +++ ++   + ++D   +  GI+T+ 
Sbjct: 163 GQGGRPWQTVTAGEAMPAGFAAAPVHVSLHEAARLMTARQRSAIVLLDGDGRAAGILTDR 222

Query: 271 DIFRNFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D           + L    +M      +   T     M L+   NI  ++VV+  +  +G
Sbjct: 223 DFRSRVVGGGADHALPASVLMSAPVAGVQAGTPCLDVMLLMAGRNIHHVVVVEGDE-PVG 281

Query: 329 IVHFLDLL 336
           ++   DL+
Sbjct: 282 VLSSHDLM 289


>gi|302520019|ref|ZP_07272361.1| RpiR-family transcriptional regulator [Streptomyces sp. SPB78]
 gi|302428914|gb|EFL00730.1| RpiR-family transcriptional regulator [Streptomyces sp. SPB78]
          Length = 276

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   ++L          AV  +   + R+ I G+G S  +   L   L   G  +
Sbjct: 89  ERQTLADTAANLDT---AALGAAVTALAQAR-RIDIYGVGASHLVAQDLGQKLLRIGLFA 144

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ + ++ SGS+ ++   L  A       IAIT       A
Sbjct: 145 QAHADPHLAITNAVQLRGKDVAVAITHSGSTSDVVEPLRAAFERGATTIAITGRPDGSAA 204

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT            A  +S   Q  + D L + + + 
Sbjct: 205 QYADHVLTT-VAARESELRPAAMSSRASQHLVVDCLFVGVAQR 246


>gi|288931082|ref|YP_003435142.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288893330|gb|ADC64867.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 127

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 44/112 (39%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLS 284
               + +V     + +   I+ EKR G V V     ++ GI TE D+  + F  D     
Sbjct: 7   MKRDLVVVDEKTKVSEVCRIMGEKRVGSVLVS-RNGEIYGIFTERDLLSKVFPDDGLERE 65

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V          +  D  +  A +++ +  I  L V+ +  +  GI    DL+
Sbjct: 66  VGRYATTPLITVSPDYSVKEAAKIMAEMKIRRL-VIAEEGEVAGIFTASDLV 116



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            ++   +  V     + +A  I++E +   + V+ E  ++ GI T  D+     K
Sbjct: 68  RYATTPLITVSPDYSVKEAAKIMAEMKIRRL-VIAEEGEVAGIFTASDLVEVLAK 121



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + +VM ++  V+ E T ++   +++ +  +  ++V     +  GI    DLL
Sbjct: 1   MKLREVMKRDLVVVDEKTKVSEVCRIMGEKRVGSVLV-SRNGEIYGIFTERDLL 53


>gi|11498576|ref|NP_069804.1| hypothetical protein AF0971 [Archaeoglobus fulgidus DSM 4304]
 gi|2649628|gb|AAB90272.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 600

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 4/111 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVE 286
               +      + DA   +     G + VVD+  K  GI+T  D      +   +   V 
Sbjct: 151 KKPVVCSPYTSIRDAAIKMELNGVGSIVVVDDNLKPLGILTSKDFRTFIIYGKSHQEKVS 210

Query: 287 DVMIKNPKVILEDTLLTVA-MQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             M      +   T +  A ++LL +  I+ L VV +  K  G++   D+L
Sbjct: 211 AYMTSPVVAVDYSTPVFEAHLELL-KRGINHL-VVTENGKVRGVITANDIL 259



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 271 DIFRN--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D+FR       L    V +++ K P V    T +  A   +  + +  ++VVDD  K +G
Sbjct: 129 DLFREEEITDRLFLTRVGELISKKPVVCSPYTSIRDAAIKMELNGVGSIVVVDDNLKPLG 188

Query: 329 IVHFLD 334
           I+   D
Sbjct: 189 ILTSKD 194



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 29/79 (36%), Gaps = 5/79 (6%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  DF      GK            +    +  V    P+ +A   L ++    + VV 
Sbjct: 190 LTSKDFRTFIIYGK----SHQEKVSAYMTSPVVAVDYSTPVFEAHLELLKRGINHL-VVT 244

Query: 259 EGQKLKGIITEGDIFRNFH 277
           E  K++G+IT  DI   F 
Sbjct: 245 ENGKVRGVITANDILTLFE 263


>gi|332361370|gb|EGJ39174.1| CBS domain protein [Streptococcus sanguinis SK1056]
          Length = 209

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDKDNERKLLGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|329766152|ref|ZP_08257711.1| signal transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137423|gb|EGG41700.1| signal transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 276

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 70/195 (35%), Gaps = 31/195 (15%)

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
           +     ++ IM      +LAI   +  +  F++ D    +              V     
Sbjct: 83  NSTPEKSAEIMLEKGVSSLAIGTKDEIDGIFTKTDLVKYY----FENYSSNNKVVDFMTH 138

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTL 283
                    PL   +  + E R   + V D+ +K  GII+  D+FR        +D +  
Sbjct: 139 EYVFTHTAAPLFKVVRKMIENRISRIIVKDQNEKPVGIISFRDLFRISIELGSEEDDSGF 198

Query: 284 SVE--------------------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           ++                     DVM K    I  D  L  A +L+ ++NIS L V+D  
Sbjct: 199 TISEQIRKGFLSEEGFGGISLARDVMSKGIISIKFDKDLKDACKLILENNISGLAVLDGN 258

Query: 324 QKAIGIVHFLDLLRF 338
              +GI+   D+L+ 
Sbjct: 259 NSIVGIISKTDILKA 273



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 2/98 (2%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIKNPKVILEDTLL 302
            I+ EK    +A+  + + + GI T+ D+ +  F    +   V D M            L
Sbjct: 91  EIMLEKGVSSLAIGTKDE-IDGIFTKTDLVKYYFENYSSNNKVVDFMTHEYVFTHTAAPL 149

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              ++ + ++ IS ++V D  +K +GI+ F DL R  I
Sbjct: 150 FKVVRKMIENRISRIIVKDQNEKPVGIISFRDLFRISI 187



 Score = 43.3 bits (101), Expect = 0.058,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            V+        +     + D I  L E     + VV E  K  GIITE D+      +  
Sbjct: 3   SVIDICKKPISILKNSTISDIIKKLLENNLSRLIVV-ENGKPIGIITEKDVGLFLFSETT 61

Query: 282 TLSVEDVMIK---NPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++D+MI     P   I +++    + +++ +  +S L +    +   GI    DL++
Sbjct: 62  KQGLDDIMINKIMKPILFIQDNSTPEKSAEIMLEKGVSSLAIGTKDE-IDGIFTKTDLVK 120

Query: 338 F 338
           +
Sbjct: 121 Y 121



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 2/52 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +SV D+  K P  IL+++ ++  ++ L ++N+S L+VV +  K IGI+   D
Sbjct: 2   MSVIDIC-KKPISILKNSTISDIIKKLLENNLSRLIVV-ENGKPIGIITEKD 51


>gi|323487905|ref|ZP_08093163.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
 gi|323398639|gb|EGA91427.1| transcriptional regulator, RpiR family protein [Planococcus
           donghaensis MPA1U2]
          Length = 280

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 65/162 (40%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +  +  +           A+ KI   +  VVI GIG SG     + + L   G  + 
Sbjct: 101 NNVIQVISDTSDVVSEELLDQAIMKIAEAED-VVIFGIGSSGIAALDMQNRLMRIGKNAS 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +  +         +T++ ++I +S +GS+ ++   +  ++     +IA+TS  KS +  
Sbjct: 160 VITDSHFQMMRAASMTKNTVVIAVSLTGSTKDIVDAVSASKASGATVIALTSYTKSPLTK 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD+VL      +  P       S I QL + D +   L   
Sbjct: 220 FADLVLLSS--SKESPLDSGSLVSKISQLFLIDLICTGLAMK 259


>gi|313608590|gb|EFR84463.1| conserved protein YtoI [Listeria monocytogenes FSL F2-208]
          Length = 360

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 43  IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 102

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 103 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 153

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 154 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 209

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 210 VKDDLTLIGIVSRQDILK 227


>gi|308233942|ref|ZP_07664679.1| inosine 5-monophosphate dehydrogenase [Atopobium vaginae DSM 15829]
          Length = 504

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 43/203 (21%), Positives = 69/203 (33%), Gaps = 13/203 (6%)

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P  + +    S V+    +V     E  S      P  SAIMQ   G  LAIAL +   
Sbjct: 18  VPGYSSSKNIPSNVSLETPLVRYAKGEKPSITMH-IPMVSAIMQAVSGPRLAIALAQEGG 76

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP--LVKIGCPLIDAITILSEKRFGCVAV 256
            S   F       +     V       +G  I    +     L D + +        + V
Sbjct: 77  IS---FIYGSQSPENEAQMVREVKSYKAGFVISDSTLTPDMTLADVLELKERTGHTTMPV 133

Query: 257 VDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQ 311
            ++G    K  GI+T  D      +D     V + M    +       T L     ++ +
Sbjct: 134 TEDGTPTGKFCGIVTSRDYR--VSRDEPQKPVREFMTAASDCITANARTSLKECNDIIWE 191

Query: 312 HNISVLMVVDDCQKAIGIVHFLD 334
             ++ L +VDD    + +V   D
Sbjct: 192 QKVNQLPIVDDNGNLVSLVFRKD 214


>gi|255936331|ref|XP_002559192.1| Pc13g07630 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211583812|emb|CAP91832.1| Pc13g07630 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 525

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 72/194 (37%), Gaps = 11/194 (5%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S+    +D+ L             AP  S+ M      ++AI +           +  
Sbjct: 45  PGSITFPASDVSLETKVTRRFTI--KAPLLSSPMDTVTEHSMAIHMALLGGLG--VIHNN 100

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKL 263
            P  +   +        +     P+V      + +A  + ++  FG   V ++G    KL
Sbjct: 101 CPPDEQAEMVRKVKRYENGFIQDPIVLSPETTVGEAKELKTKWGFGGFPVTEKGTLLSKL 160

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T  DI   FHK+ +   V  VM+ +       T L  A ++LR      L +VD  
Sbjct: 161 LGIVTSRDI--QFHKN-HEDPVTAVMMTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDKD 217

Query: 324 QKAIGIVHFLDLLR 337
              I ++   DL++
Sbjct: 218 GSLISLLSRSDLMK 231


>gi|163746629|ref|ZP_02153986.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
 gi|161379743|gb|EDQ04155.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
          Length = 144

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 57/129 (44%), Gaps = 6/129 (4%)

Query: 218 VCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +  S ++ +     +V  K G  + +A  +L+EKR G + +  +G+   GI++E DI R 
Sbjct: 1   MLVSQILKTKPDDKVVTTKPGLAISEAAAMLAEKRIGTLVISADGKTPDGILSERDIVRE 60

Query: 276 FHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +        +VE +M         D      +Q +       + V+ +  + +G++  
Sbjct: 61  LGRQGAGCLQQTVESIMTTKLVTCSRDDRSDAILQKMTDGRFRHMPVL-ENGELVGLISL 119

Query: 333 LDLLRFGII 341
            D+++  ++
Sbjct: 120 GDVVKAQLM 128


>gi|115524340|ref|YP_781251.1| signal-transduction protein [Rhodopseudomonas palustris BisA53]
 gi|115518287|gb|ABJ06271.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisA53]
          Length = 142

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    L  A+ +L++++ G + V+    K+ GI++E D+ R        +    V  VM
Sbjct: 17  VEPETLLAAAVKVLADRKIGALLVM-SRNKIHGILSERDVVRVLGAKGAVVLDQPVSAVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +          ++  M+++       L V+DD  + +G++   D+++
Sbjct: 76  TRKVVHCRPSDTVSSIMEVMTSGKFRHLPVIDD-GELVGLISIGDIVK 122


>gi|167462619|ref|ZP_02327708.1| hypothetical protein Plarl_08670 [Paenibacillus larvae subsp.
           larvae BRL-230010]
 gi|322382917|ref|ZP_08056751.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321153110|gb|EFX45566.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 267

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 1/111 (0%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
           +      +  IK  K R+ I G+G SG    +    L+  G  S  V           ++
Sbjct: 108 NEPLKEVLSLIKKAK-RLFIYGLGSSGLAAQEFNYRLSRMGFYSEAVTDPHLMIIRSVLL 166

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
            +DD++I  S SG + +L   L  A+     LIA T+   + +   A  V+
Sbjct: 167 EKDDVVIAFSRSGQTKDLLKSLEAAKGKKAKLIAFTAFGDTPLTKMAHKVI 217


>gi|156530468|ref|YP_001429561.1| CBS domain-containing protein [Paracoccus methylutens]
 gi|154818286|gb|ABS87612.1| CBS domain protein [Paracoccus methylutens]
          Length = 151

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--- 281
                 +V    P+ D   +L   R   V VVDE ++L G++T  D+  R   + L    
Sbjct: 1   MTSDPVVVHPETPVEDIAGLLLAHRINGVPVVDENRRLLGVVTAADLIHRAADERLEPRE 60

Query: 282 -----------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                    +  +VM      +  D    VA +L+  + ++ L 
Sbjct: 61  SLWKENFWISFLGPEGAQPGKAEGRTAAEVMTHEVHSVTPDDHPLVAARLMADYGLTSLP 120

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+ +    IG+V  +DLLR
Sbjct: 121 VI-EAGMVIGVVSRIDLLR 138


>gi|119476443|ref|ZP_01616794.1| inositol-5-monophosphate dehydrogenase [marine gamma
           proteobacterium HTCC2143]
 gi|119450307|gb|EAW31542.1| inositol-5-monophosphate dehydrogenase [marine gamma
           proteobacterium HTCC2143]
          Length = 489

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LA+A+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEWRLAVAIAQEGGIG-----IIHKSMSIDQQAYQVRAVKKHESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +    P+     I  E     V V+D   +L GI+T  D+    H D     V  +
Sbjct: 96  DPVTIDASEPIHRLFEIREEHNISGVPVLD-NGELVGIVTSRDVRFETHMD---QPVSTI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E   L V  +LL +H I  ++VV+D     G++   D+ + 
Sbjct: 152 MTTKERLVTVKEGEDLDVVKELLHKHRIEKVLVVNDAFDLCGMITVKDINKA 203


>gi|295133690|ref|YP_003584366.1| nucleotidyltransferase [Zunongwangia profunda SM-A87]
 gi|294981705|gb|ADF52170.1| putative nucleotidyltransferase [Zunongwangia profunda SM-A87]
          Length = 640

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 45/108 (41%), Gaps = 6/108 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIK 291
                +  A  ++S+++ G + V  +     GI+T+ D   +           VE +M  
Sbjct: 182 SPETSIKSAAQLMSKRKVGSILVT-KNDVPVGILTDEDFRNSIATGAYSIDTPVEKIMSY 240

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
                 ++  +  A   + +HNI+ + + +D     + IGI+   D++
Sbjct: 241 PVICYPKNVTIAQAQITMMKHNINHICITEDGTPNTRVIGILSEHDIM 288



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 1/38 (2%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +T +  A QL+ +  +  ++V       +GI+ 
Sbjct: 179 VTTSPETSIKSAAQLMSKRKVGSILVT-KNDVPVGILT 215


>gi|168052297|ref|XP_001778587.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162670041|gb|EDQ56617.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 197

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 3/105 (2%)

Query: 236 GCPLIDAITILSEK--RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                 A+  +         V VVD   +  G++++ D  +     L    V++VM    
Sbjct: 86  TASPEQALEEIDHYFADITGVPVVDSDHRCVGVLSKKDRTKASSVSL-KAKVKEVMSSPA 144

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  D +++ A  L+ ++ I  + +V+D  + +GIV   D+   
Sbjct: 145 ITLPADKIVSDAAVLMLKNKIHRIPIVNDSNQVVGIVTRTDIFSA 189



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 19/53 (35%), Gaps = 2/53 (3%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM K       +  L           I+ + VVD   + +G++   D  + 
Sbjct: 77  ADVMSKTIFTASPEQALEEIDHYFAD--ITGVPVVDSDHRCVGVLSKKDRTKA 127



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 11/72 (15%), Positives = 28/72 (38%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K  ++ + A            +     + DA  ++ + +   + +V++  ++ GI+T  D
Sbjct: 126 KASSVSLKAKVKEVMSSPAITLPADKIVSDAAVLMLKNKIHRIPIVNDSNQVVGIVTRTD 185

Query: 272 IFRNFHKDLNTL 283
           IF       +  
Sbjct: 186 IFSALEGGSDKK 197


>gi|89098838|ref|ZP_01171719.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus sp. NRRL B-14911]
 gi|89086514|gb|EAR65634.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus sp. NRRL B-14911]
          Length = 186

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/186 (22%), Positives = 72/186 (38%), Gaps = 12/186 (6%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            +I   K+ L+ LE + +     Q      +I    G+V   G G+SG +    A  L  
Sbjct: 3   DTIEYLKKILNELEHAAEAIDPGQAEALASQILES-GKVFTAGAGRSGFMAKSFAMRLMH 61

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  ++ +               +DL+I+ S SG +  L ++   AR     + A T   
Sbjct: 62  MGVDAYVIGETVTP-----GFEENDLLIIGSGSGETKSLVSMAEKARSIGGKIAAATIVP 116

Query: 149 KSVVACHADIVLTLPKEPESCPHG----LAPTTSAIMQLAIG--DALAIALLESRNFSEN 202
            S +A  ADI + +P   +    G    + P  S   Q  +   DA+ + ++E +     
Sbjct: 117 DSSIASLADITVKMPGATKDQNEGGLSTIQPMGSLFEQSLLLLYDAIILRVMEKKGLDSA 176

Query: 203 DFYVLH 208
             +  H
Sbjct: 177 KMFGRH 182


>gi|319783238|ref|YP_004142714.1| CBS domain containing protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
 gi|317169126|gb|ADV12664.1| CBS domain containing protein [Mesorhizobium ciceri biovar
           biserrulae WSM1271]
          Length = 143

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIK 291
               L +AI IL+E + G + + +  +K+ GI++E DI R   ++      + V   M  
Sbjct: 19  PNEKLSEAIRILAEHKIGALVITNGDRKIVGILSERDIVRVVAREGGAALDIPVRSAMTP 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             K+  E+  +   M+++ +     L V +      GIV   D+++  I
Sbjct: 79  KVKICNENHTVNEVMEIMTRGRFRHLPV-EKDGMLDGIVSIGDVVKRRI 126



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 26/43 (60%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +  L+ A+++L +H I  L++ +  +K +GI+   D++R
Sbjct: 16  TLGPNEKLSEAIRILAEHKIGALVITNGDRKIVGILSERDIVR 58


>gi|261403749|ref|YP_003247973.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
 gi|261370742|gb|ACX73491.1| CBS domain containing protein [Methanocaldococcus vulcanius M7]
          Length = 264

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/122 (26%), Positives = 53/122 (43%), Gaps = 7/122 (5%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +   ++  V     + D I +L E       VV E  KL GI++  DI     
Sbjct: 1   MSVKVAEYMTKNVITVSKDNTVRDVIKLLKETGHNSFPVV-ENGKLIGIVSVHDI---VG 56

Query: 278 KDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +D N   VE+VM K     V   D  +    +++ +   S L VVD+    +GI+  +D+
Sbjct: 57  RDDNE-KVENVMTKREDMVVTTPDANIMDVGRVMFRTGFSKLPVVDEENNLVGIISNMDV 115

Query: 336 LR 337
           +R
Sbjct: 116 IR 117



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                +VM   + + +      ++D   ++    F  + VVDE   L GII+  D+ R
Sbjct: 60  NEKVENVMTKREDMVVTTPDANIMDVGRVMFRTGFSKLPVVDEENNLVGIISNMDVIR 117


>gi|311278262|ref|YP_003940493.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
 gi|308747457|gb|ADO47209.1| transcriptional regulator, RpiR family [Enterobacter cloacae SCF1]
          Length = 274

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 63/143 (44%), Gaps = 4/143 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +    + L    + L   L      A+ + ++    V I G+  S  +G  L   L   
Sbjct: 94  VVSESVQALQDTATLLDRALLETAAGALHQARS----VQIYGVAASAILGEYLHYKLLRL 149

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+        +  +   +T+DDL++ +S SGS+ +L  ++  AR+    ++A+++  +
Sbjct: 150 GKPAQLFSDMHRAAMNATTLTKDDLVVAISSSGSTRDLLHVVKLARKRGARVLALSNTPR 209

Query: 150 SVVACHADIVLTLPKEPESCPHG 172
           S +A  +D++L   K       G
Sbjct: 210 SPLATLSDMLLVAAKPEGPLSAG 232


>gi|47093437|ref|ZP_00231201.1| CBS domain protein [Listeria monocytogenes str. 4b H7858]
 gi|47018165|gb|EAL08934.1| CBS domain protein [Listeria monocytogenes str. 4b H7858]
          Length = 376

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 91  IVGNRVSAHELALKRGAAVLITGGFDTDDEVKRLADEKELPILSTSYDTFTVATMINRAI 150

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 151 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 201

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 202 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 257

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 258 VKDDLTLIGIVSRQDILK 275


>gi|330834671|ref|YP_004409399.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329566810|gb|AEB94915.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 129

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVE 286
                ++    L+DA  ++  +  G + V+ E  + KGI++E DI      DL     + 
Sbjct: 9   REPVTIEPKANLVDAAKLMKREGVGSLLVM-ESGQPKGIVSERDIVYAIASDLPLNTELS 67

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FGII 341
            VM  N       T +  A  L+    I  L++ D   + +G++   D+ +  G+I
Sbjct: 68  RVMSTNLVTADPKTDVGEAAILMVGKGIRHLVITDK-GRVLGVISLRDIAKSLGLI 122



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++++ + P  I     L  A +L+++  +  L+V+ +  +  GIV   D++
Sbjct: 3   VKELIAREPVTIEPKANLVDAAKLMKREGVGSLLVM-ESGQPKGIVSERDIV 53


>gi|312898430|ref|ZP_07757820.1| SIS domain protein [Megasphaera micronuciformis F0359]
 gi|310620349|gb|EFQ03919.1| SIS domain protein [Megasphaera micronuciformis F0359]
          Length = 285

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 63/183 (34%), Gaps = 9/183 (4%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +LQ         A   ++  + R+ + G G S  +   L +     G        + 
Sbjct: 111 LLDTLQLLDYEAIDRAAAVLRQAR-RIAVYGFGNSATVCRDLTTRYLRLGLSIQDYADSH 169

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  ++  +D ++ +S SG S +L   +  A+     +I ITS   S +A  AD  +
Sbjct: 170 MQVTSAALLDENDAVLAVSHSGLSKDLIHSVETAKERGATIIVITSHIHSPLAKLAD--I 227

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
            L        +      S ++ +AIGD L   +  +      D  +           +  
Sbjct: 228 CLHGMGREVNYSTEAGASRLIHMAIGDVLYTRIAMA------DPALFESNMTRMRHEISK 281

Query: 221 SDV 223
             +
Sbjct: 282 KRL 284


>gi|282165542|ref|YP_003357927.1| hypothetical protein MCP_2872 [Methanocella paludicola SANAE]
 gi|282157856|dbj|BAI62944.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 284

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 46/98 (46%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + ++ ++R   V VV +   L GI+T  D+ ++         +  +M ++P  I  D 
Sbjct: 26  EVLDLMQKERISAVPVV-KEGTLLGIVTRIDLLKH----PTEEQIALLMTRDPVTITPDA 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+ A ++L    +  L VV    K +GIV   D++  
Sbjct: 81  PLSEAARILLMTGLRRLPVV-VKNKLVGIVTVADIVGA 117



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +    PL +A  IL       + VV +  KL GI+T  DI     +   T  +
Sbjct: 69  MTRDPVTITPDAPLSEAARILLMTGLRRLPVVVKN-KLVGIVTVADIVGAIGQMDITAPI 127

Query: 286 EDVMIKNPKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  + KN  V + EDT ++V  +++R      L V++   +  GI+   DL+
Sbjct: 128 KAYV-KNGIVAVWEDTPVSVVSEIIRLSKHDALPVLNSKGELTGIITITDLI 178



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+V+D+MIKN K I         + L+++  IS + VV      +GIV  +DLL+
Sbjct: 5   LTVDDIMIKNVKSIEIPGSRDEVLDLMQKERISAVPVV-KEGTLLGIVTRIDLLK 58



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 25/152 (16%), Positives = 51/152 (33%), Gaps = 36/152 (23%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G +G + + A    +  + I  V    P+     I+   +   + V++   +L GIIT 
Sbjct: 115 VGAIGQMDITAPIKAYVKNGIVAVWEDTPVSVVSEIIRLSKHDALPVLNSKGELTGIITI 174

Query: 270 GDIFR---------------NFHKD---------------------LNTLSVEDVMIKNP 293
            D+                    +D                     L  + V+ VM+K+ 
Sbjct: 175 TDLINMSRIEDSVERSDMSSASDEDKWTWESMRDTMQLYYGVSRIKLPDVPVKSVMVKDV 234

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                 T ++   + +R++ I  + V+    K
Sbjct: 235 ITAFHKTPVSDCAKKMRRNRIEQVPVITADNK 266


>gi|117926615|ref|YP_867232.1| signal-transduction protein [Magnetococcus sp. MC-1]
 gi|117610371|gb|ABK45826.1| putative signal-transduction protein with CBS domains
           [Magnetococcus sp. MC-1]
          Length = 385

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLN-TLS 284
              IP++  G    +    +     GC  VVDE   L GI+TE DI R    +D +    
Sbjct: 148 RKPIPMLSPGIQYREVAQKMFAWHRGCAMVVDE-GILIGIVTERDIMRLRLREDWSPEWM 206

Query: 285 VEDVMIKNPKVILEDTLLTVAMQL-LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++D M + P  I     L   M++ +   +   L + D      G++   D+++ 
Sbjct: 207 LDDFMRRQPVAIDPGRTLDEVMEIFMETDH-RRLPIADMDGTFRGMISMTDVIKA 260



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 67/173 (38%), Gaps = 19/173 (10%)

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL-HPGGKLGTLFVCASDVMHSGDSI 230
             AP  + ++Q  +   LA         +E DF      G    T  +    +       
Sbjct: 40  HAAPGFAVVLQDMVPTGLA---------TEFDFLKWIVQGRDPDTTKIGDMRLSRP---- 86

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDV 288
            +V  G P+ + + + S +RF    V+++ + L G I E  I  +  +   L    V DV
Sbjct: 87  HVVHEGTPVQELLELYSRRRFRRFPVLNDEEILIGTINEKQILASLPRTDLLKQFRVMDV 146

Query: 289 MIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            I+ P  ++          Q +   +    MVVD+    IGIV   D++R  +
Sbjct: 147 -IRKPIPMLSPGIQYREVAQKMFAWHRGCAMVVDE-GILIGIVTERDIMRLRL 197



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 4/116 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGC--VAVVDEGQKLKGIITEGDIFRNF--HKDL 280
               ++  +     L D + +++ +       AVV +     G+ TE D  +     +D 
Sbjct: 14  RMIGNVITLTPTTTLRDGMRLMTSQSHAAPGFAVVLQDMVPTGLATEFDFLKWIVQGRDP 73

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +T  + D+ +  P V+ E T +   ++L  +       V++D +  IG ++   +L
Sbjct: 74  DTTKIGDMRLSRPHVVHEGTPVQELLELYSRRRFRRFPVLNDEEILIGTINEKQIL 129


>gi|301058122|ref|ZP_07199174.1| cyclic nucleotide-binding domain protein [delta proteobacterium
           NaphS2]
 gi|300447754|gb|EFK11467.1| cyclic nucleotide-binding domain protein [delta proteobacterium
           NaphS2]
          Length = 785

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 20/121 (16%), Positives = 50/121 (41%), Gaps = 4/121 (3%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK 278
             D+ H             + DA +++S+++   + + +   +  G++T+ D+  +   +
Sbjct: 318 VKDIFHEDVLSC--DEKTAIQDAASLMSDRKCSSIFIKNAKDEYTGVVTDTDLRSKVIAR 375

Query: 279 DLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + T  +  +M      I  D +++ A+  +   N+  L V +      GI+   D+L 
Sbjct: 376 GRDITAPIASIMSSPLHSIQMDAMVSEALLEMMDTNMKHLAVRNRQGSVAGILTNRDILT 435

Query: 338 F 338
            
Sbjct: 436 A 436


>gi|302342606|ref|YP_003807135.1| signal transduction protein with CBS domains [Desulfarculus baarsii
           DSM 2075]
 gi|301639219|gb|ADK84541.1| putative signal transduction protein with CBS domains
           [Desulfarculus baarsii DSM 2075]
          Length = 213

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------F 273
              +   V     +  A  I++E R   + VVD   +LKG+IT  +I             
Sbjct: 7   MSPNPITVSEDTQVTAAHKIMAENRVRRLPVVDGEGRLKGLITLRNIIAASPSAAEALSR 66

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  +  L V  +M+KNP+ +  +  +   ++      I    VV +  K +GIV   
Sbjct: 67  HEMNALMAKLKVGHIMVKNPETVSPEDSVMDVVRDGHVRGIGAFPVV-EDGKLVGIVTET 125

Query: 334 DLLRF 338
           ++ R 
Sbjct: 126 EIFRA 130



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 30/56 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++  M  NP  + EDT +T A +++ ++ +  L VVD   +  G++   +++  
Sbjct: 1   MKIKHWMSPNPITVSEDTQVTAAHKIMAENRVRRLPVVDGEGRLKGLITLRNIIAA 56



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/72 (22%), Positives = 25/72 (34%), Gaps = 3/72 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            +           +    +M        V     ++D +     +  G   VV E  KL 
Sbjct: 63  ALSRHEMNALMAKLKVGHIMVKNPET--VSPEDSVMDVVRDGHVRGIGAFPVV-EDGKLV 119

Query: 265 GIITEGDIFRNF 276
           GI+TE +IFR  
Sbjct: 120 GIVTETEIFRAM 131


>gi|257451908|ref|ZP_05617207.1| RpiR-family transcriptional regulator [Fusobacterium sp. 3_1_5R]
 gi|317058459|ref|ZP_07922944.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
 gi|313684135|gb|EFS20970.1| conserved hypothetical protein [Fusobacterium sp. 3_1_5R]
          Length = 283

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 5/195 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K V+     +  N ++Q   + +  E   + ++E +       +   AV+ +   K +++
Sbjct: 81  KEVSIIDSEIDSNDSLQEVCQKVAREN--MRAIEDTYSLLDFKELEKAVKALGKAK-KIM 137

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G SG +   L+  L   G    F          L  +T  D++ V+S+SG + E+ 
Sbjct: 138 ILGAGFSGVVARDLSYKLLELGKDVVFESDFHMQFSLLTTMTSRDILFVISYSGKTKEVY 197

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            I   A+   I +I +T+   + +    DI L       +        +  I Q+ + D 
Sbjct: 198 EITKKAKERGIQIITLTTIAGNPIRDLGDITLNT--VELNKNFRATALSPRISQMTVIDM 255

Query: 189 LAIALLESRNFSEND 203
           L + L+      E +
Sbjct: 256 LYVKLILENKEMEEN 270


>gi|126466195|ref|YP_001041304.1| signal-transduction protein [Staphylothermus marinus F1]
 gi|126015018|gb|ABN70396.1| putative signal-transduction protein with CBS domains
           [Staphylothermus marinus F1]
          Length = 141

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            +              I  +    P+ +A   +  +  G + VVD+     GI+T+ DI 
Sbjct: 1   MSEEYLLKAYDIMTPEIRFIDKNSPIKEAALRMINEGIGALIVVDQEG-PIGIVTKRDII 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  +D     VE +M     +I   + +   + L+ ++NIS L V  +  K IG++
Sbjct: 60  WGVLFEKRDPEKEPVEKIMSTPLIMIDSSSDIVQILDLMIRNNISHLPV-REGDKVIGMI 118

Query: 331 HFLDLL 336
             +DLL
Sbjct: 119 SDMDLL 124


>gi|1749420|dbj|BAA13769.1| unnamed protein product [Schizosaccharomyces pombe]
          Length = 232

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 63/178 (35%), Gaps = 25/178 (14%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVM 224
             P  S+ M     D +AI +               E    ++    K    F+    V 
Sbjct: 8   KTPFMSSPMDTVTEDQMAIYMALLGGIGVIHHNCTPEEQAAMVRKVKKYENGFILDPVVF 67

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
                         + D + I   K F  + + + G    KL GI+T  D+   FHKD N
Sbjct: 68  ---------SPQHTVGDVLKIKETKGFSGIPITENGKLRGKLVGIVTSRDV--QFHKDTN 116

Query: 282 TLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           T  V +VM          E   L  A ++LR+     L VVD     + ++   DL++
Sbjct: 117 T-PVTEVMTPREELITTAEGISLERANEMLRKSKKGKLPVVDKDDNLVALLSLTDLMK 173


>gi|312884147|ref|ZP_07743859.1| hypothetical protein VIBC2010_17330 [Vibrio caribbenthicus ATCC
           BAA-2122]
 gi|309368195|gb|EFP95735.1| hypothetical protein VIBC2010_17330 [Vibrio caribbenthicus ATCC
           BAA-2122]
          Length = 629

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 12/123 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
            +  P +     +  A   ++E+    + ++D         +   L GIIT+ D+  R  
Sbjct: 157 TNEAPTIDKTESIQTAAIKMAEENVSSLLIIDPEIAEDEEDDNNPLVGIITDRDLCTRVL 216

Query: 277 HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + L+    V  VM      +  +  +  AM  + ++N   L V+   +K IGI+   D+
Sbjct: 217 AQGLDPQDEVSTVMTSEVISLDHNAYVYEAMLTMLRYNAHHLPVL-KDKKPIGIIEATDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278



 Score = 37.2 bits (85), Expect = 3.7,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---------DDCQKAI 327
             DL T  V  ++      I +   +  A   + + N+S L+++         DD    +
Sbjct: 144 QNDLTTSKVRTLLTNEAPTIDKTESIQTAAIKMAEENVSSLLIIDPEIAEDEEDDNNPLV 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|260776166|ref|ZP_05885061.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio coralliilyticus ATCC BAA-450]
 gi|260607389|gb|EEX33654.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio coralliilyticus ATCC BAA-450]
          Length = 259

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     S Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 78  MACLDVAKNSLDSMQINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPITCFE 136

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 137 DIVMQRMSCINCTDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASS 195

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 196 LSISLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 234


>gi|238752028|ref|ZP_04613512.1| RpiR-family transcriptional regulator [Yersinia rohdei ATCC 43380]
 gi|238709728|gb|EEQ01962.1| RpiR-family transcriptional regulator [Yersinia rohdei ATCC 43380]
          Length = 292

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG       
Sbjct: 112 LQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAEDAK 161

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G            +    ++   D+ I +S SG+S E    L  A++     +A
Sbjct: 162 GKLMRIGLRVDAATNNHFMYMQATLMRPGDVAIGISHSGTSAETVQALKLAKQAGATTVA 221

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 222 LTHNMGSSITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|226329893|ref|ZP_03805411.1| hypothetical protein PROPEN_03806 [Proteus penneri ATCC 35198]
 gi|225200688|gb|EEG83042.1| hypothetical protein PROPEN_03806 [Proteus penneri ATCC 35198]
          Length = 280

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ LE           + AV+ +   K ++   G+G S  +     +  +    P  + 
Sbjct: 102 AMAGLEDVKNNIDIAAINRAVDILTQAK-KISFFGLGASAAVAHDAMNKFSRFNIPVTYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        T  D+++V+S +G +  L  I   AR     +IAIT+   S++A  A
Sbjct: 161 DDVVMQRMSCINSTDGDVVVVISHTGRTKNLIEIAKIARENDAAVIAITT-PGSLLASEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + + L    ++  +   P  S + QL I D LA   +  R     D
Sbjct: 220 TLPILLDVPEDTDIY--MPMISRLAQLTIIDVLATGFILRRGPKFRD 264


>gi|188590170|ref|YP_001920853.1| nucleotidyl transferase [Clostridium botulinum E3 str. Alaska E43]
 gi|188500451|gb|ACD53587.1| nucleotidyl transferase [Clostridium botulinum E3 str. Alaska E43]
          Length = 347

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 61/107 (57%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           LV     +  +I IL +     + VV +G+KL G++T+GDI R   K+ + + S++++M 
Sbjct: 7   LVNKDISIRKSIDILDKSGKKFIVVV-KGKKLIGVVTDGDIRRWILKNGDISKSIDNIMN 65

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+PK +LE        ++++Q  I  + +V++  + I ++ + D+ +
Sbjct: 66  KSPKYLLEAER-DNVKEIMKQFKIEAVPIVNEEIEVIDVIFWNDVYQ 111


>gi|89094124|ref|ZP_01167067.1| IMP dehydrogenase [Oceanospirillum sp. MED92]
 gi|89081599|gb|EAR60828.1| IMP dehydrogenase [Oceanospirillum sp. MED92]
          Length = 489

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +     ++  +    + V+      
Sbjct: 41  NIPLVSAAMDTVTESGLAIAMAQEGGIGIIHKNLTIEQQAAEVLKVKKYEAGVV---SDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +    + +   + +E  F    VVD+   L GI+T+ D    F + L   +V  +M 
Sbjct: 98  VTCRSDMTVGELRQLAAEVGFSGFPVVDD-GDLVGIVTDRDFR--FERKL-DATVASIMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E         LLR+H I  ++VVD   K  G++   D+ + 
Sbjct: 154 PKDRLVTVEEGVDPDEVRNLLRKHRIEKILVVDSAFKLQGMMTVKDMNKA 203


>gi|254381628|ref|ZP_04996992.1| CBS [Streptomyces sp. Mg1]
 gi|194340537|gb|EDX21503.1| CBS [Streptomyces sp. Mg1]
          Length = 214

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/127 (16%), Positives = 50/127 (39%), Gaps = 15/127 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
              +   +       + + ++ + +   V V++   ++ G+++E D+     F +D   L
Sbjct: 12  MTHTAVAIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADLLPKEEFRQDDPQL 71

Query: 284 S-------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                          E++M      +  D  L  A +++ + ++  L VV+      G+V
Sbjct: 72  PGQLDEASKAGGVLAEELMSSPAVTVHPDATLAEAARIMARKHVKRLPVVNGVGMLEGVV 131

Query: 331 HFLDLLR 337
              DLL+
Sbjct: 132 SRSDLLK 138



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM      I  +      ++L+ Q  +S + V++   + +G+V   DLL
Sbjct: 7   TVSDVMTHTAVAIGREASYKEIVELMDQWKVSAVPVLEGEGRVVGVVSEADLL 59



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                  V     L +A  I++ K    + VV+    L+G+++  D+ + F +
Sbjct: 90  MSSPAVTVHPDATLAEAARIMARKHVKRLPVVNGVGMLEGVVSRSDLLKVFLR 142


>gi|183221687|ref|YP_001839683.1| CBS domain-containing protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
 gi|189911762|ref|YP_001963317.1| signal transduction protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Ames)']
 gi|167776438|gb|ABZ94739.1| Signal transduction protein containing cAMP- binding and CBS
           domains [Leptospira biflexa serovar Patoc strain 'Patoc
           1 (Ames)']
 gi|167780109|gb|ABZ98407.1| Putative CBS domain protein [Leptospira biflexa serovar Patoc
           strain 'Patoc 1 (Paris)']
          Length = 143

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           ++    +++A  ++   + G + V     KL GI TE D+ R   KD N L    ++DVM
Sbjct: 17  IEEDRNVLEATQMMVGAKVGSLIVT-FQGKLVGIFTERDLMRVVAKDHNKLDQIKLKDVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                V   +  +   +  +       + V+D   K IG++   D ++  +
Sbjct: 76  TTQLTVAGPEEDVDDILNNMITKRFRHMPVLDGD-KIIGLISIGDAVKTKL 125


>gi|163733219|ref|ZP_02140663.1| nucleoside-diphosphate-sugar pyrophosphorylase [Roseobacter
           litoralis Och 149]
 gi|161393754|gb|EDQ18079.1| nucleoside-diphosphate-sugar pyrophosphorylase [Roseobacter
           litoralis Och 149]
          Length = 347

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 42/111 (37%), Gaps = 2/111 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTL 283
                  L      L   + I+     G V VV +G +L G IT+GD+ R   +    + 
Sbjct: 1   MKDFLSILAAPEDELQRILKIIDSSALGFVLVVGDGNRLLGTITDGDMRRALLRGEAMST 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI-VHFL 333
              D+M  +P+ +            L +H I+   +VDD     G+ V   
Sbjct: 61  HAIDLMNPSPRRLQAGATRIEQQNFLVRHRINFAPIVDDAGSVTGVAVSAH 111


>gi|163800688|ref|ZP_02194588.1| hypothetical protein 1103602000593_AND4_00458 [Vibrio sp. AND4]
 gi|159175037|gb|EDP59834.1| hypothetical protein AND4_00458 [Vibrio sp. AND4]
          Length = 629

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV---------DEGQKLKGIITEGDI-FRNFHKDLNT 282
           +     + +A  ++++     + +V         D    + GIIT+ D+  R   + L+ 
Sbjct: 163 IGRDQSIQEAAQLMAQDNVSSLLIVEPDFVLDEDDPQSPVVGIITDRDLCTRVLAEGLSP 222

Query: 283 LS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V  VM      +  +  +  AM  + + N+  L VV   Q  IG++   D++R+
Sbjct: 223 QDEVSTVMTTEVISLDHNAYVYEAMLTMLRSNVHHLPVV-KDQMPIGVIEATDIVRY 278



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 13/88 (14%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V+   +L+ ++++     N   DL T  V+ ++ ++   I  D  +  A QL+ Q N+S 
Sbjct: 128 VENSARLRQVVSDN----NDANDLTTSKVKTLLTRDAATIGRDQSIQEAAQLMAQDNVSS 183

Query: 317 LMVV------DDCQ---KAIGIVHFLDL 335
           L++V      D+       +GI+   DL
Sbjct: 184 LLIVEPDFVLDEDDPQSPVVGIITDRDL 211


>gi|115457002|ref|NP_001052101.1| Os04g0136700 [Oryza sativa Japonica Group]
 gi|38347506|emb|CAE02417.2| OSJNBa0095E20.4 [Oryza sativa Japonica Group]
 gi|113563672|dbj|BAF14015.1| Os04g0136700 [Oryza sativa Japonica Group]
 gi|215694958|dbj|BAG90149.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222628308|gb|EEE60440.1| hypothetical protein OsJ_13658 [Oryza sativa Japonica Group]
          Length = 220

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V+DE  +  G+I++ D  +    +    +V +VM      +  +  +  A  L+ + 
Sbjct: 131 GLPVLDEEGRCIGVISKKD--KAKASNGLDSTVGEVMSSPAITLTPEKTVLEAAALMLKE 188

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  + VV++ Q+ IGIV   D+ + 
Sbjct: 189 KVHRIPVVNEQQQVIGIVTRTDVFKA 214



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 25/44 (56%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +++A  ++ +++   + VV+E Q++ GI+T  D+F+    
Sbjct: 174 PEKTVLEAAALMLKEKVHRIPVVNEQQQVIGIVTRTDVFKALEA 217



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/80 (17%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 266 IITEGDIFRNFHKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +++  D+       +        T  + +VM +  +V + D  L            S L 
Sbjct: 76  LLSYADLRAYLESQIVTTDQMSPTAKLGEVMSRLVQVAMADQRLADIDAFFAAQ--SGLP 133

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D+  + IG++   D  + 
Sbjct: 134 VLDEEGRCIGVISKKDKAKA 153


>gi|189346783|ref|YP_001943312.1| CBS domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Chlorobium limicola DSM 245]
 gi|189340930|gb|ACD90333.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Chlorobium limicola DSM 245]
          Length = 649

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/202 (14%), Positives = 67/202 (33%), Gaps = 8/202 (3%)

Query: 143 AITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSE- 201
           AI   +  V++ H      + + P      L    +++     G+      +  R  +  
Sbjct: 91  AIFGGSTYVLSAHVAEESLIYEMPVEKIRSLIAANTSLSMFFAGEFAKSMQVMERTLTNA 150

Query: 202 -NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +   V +      +     +  +    ++        +  A  I+S+   G + VV   
Sbjct: 151 FDQHRVRYNEQSCRSFLEHETLEVKPVTNVITCSPDISVRAAAKIMSDCNIGSILVVSPE 210

Query: 261 QKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
               GIIT+ D+ +        +N   V ++M      I     +   + L+ +  +   
Sbjct: 211 NHPLGIITDTDLRKKVVAQPGSVNERPVHEIMSSPVYTITGGKTVADMVMLMVKTKLRHF 270

Query: 318 MVVDD---CQKAIGIVHFLDLL 336
            + +D        GI+   D++
Sbjct: 271 CITEDGTVDSPLQGIISEHDII 292



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            N      D  +  A +++   NI  ++VV      +GI+   DL R  ++
Sbjct: 178 TNVITCSPDISVRAAAKIMSDCNIGSILVVSPENHPLGIITDTDL-RKKVV 227


>gi|325001090|ref|ZP_08122202.1| RpiR family transcriptional regulator [Pseudonocardia sp. P1]
          Length = 295

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 68/173 (39%), Gaps = 10/173 (5%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +T++  LRS +    GL  L ++L+     Q    + +      RV++ G+G S  I   
Sbjct: 110 NTIETVLRSAVT---GLEQLPATLEHHTLLQVAQELRR----ATRVLVAGVGSSAPIAMD 162

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L + G  +  +      H    M+  D   + +S +G + E    L  A       
Sbjct: 163 AGHRLRTLGVHAEVLTDPHQQHLAARMLGTDGCCLAISHTGQTQETLTALRAAGDAGAST 222

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           I +TS ++S      +  +       +  HGL  T S ++ LA+ D L   + 
Sbjct: 223 IGLTSYHRSPFTELCNHAI---VAGATELHGLEATASRLVHLAVIDVLVALVT 272


>gi|281412386|ref|YP_003346465.1| RpiR family transcriptional regulator [Thermotoga naphthophila
           RKU-10]
 gi|281373489|gb|ADA67051.1| transcriptional regulator, RpiR family [Thermotoga naphthophila
           RKU-10]
          Length = 280

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + ++  +L    +     AVE  +  K R+V  G   S  +           G    
Sbjct: 102 KATVRAILDTLNSLDTASVEKAVEYFRNAK-RIVFIGFAASAAVAFDAFHKFTRIGKNCL 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F +        L   T DDL++ +S +G +  +      A+   IP++ IT   KS V  
Sbjct: 161 FSNDEHMIATILATATPDDLLVAISHTGETIAIVNFAKKAKEKGIPVVTITGNRKSTVTR 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++D+VL      +         TS I+QL I D +   L   
Sbjct: 221 YSDVVLVT--NTKETKIRTDAMTSRIVQLVILDTIYTLLAAR 260


>gi|315229849|ref|YP_004070285.1| hypothetical protein TERMP_00084 [Thermococcus barophilus MP]
 gi|315182877|gb|ADT83062.1| hypothetical protein TERMP_00084 [Thermococcus barophilus MP]
          Length = 282

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/143 (18%), Positives = 50/143 (34%), Gaps = 32/143 (22%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------ 274
             ++ +V  G PL  A+  L       + V+D+   L GI+ E D+ +            
Sbjct: 134 QRNVSVVWKGTPLKAALKALLLCNAMAIPVIDDDGNLVGIVDETDLLKDSEVVRVMKSSA 193

Query: 275 --------------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                                    L    VED+M KNP +      +      + ++ I
Sbjct: 194 LAVSSEEEWILESNPILLFEKAELQLPKKPVEDIMTKNPIIATPHMSVYDVANKMAKYKI 253

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L V+      +G++  +DL++
Sbjct: 254 EQLPVIKGEGDLVGLIRDMDLIK 276



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/114 (29%), Positives = 57/114 (50%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKD--LNTL 283
              +P+VK    L  A+ ++ +  +  V VV++  K+ GI+T GD I R   K+     +
Sbjct: 68  KRDVPVVKPTDDLKKAVRLMLDYDYRRVIVVNDDGKVVGILTVGDIIRRYLAKNEKYRNV 127

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +E    +N  V+ + T L  A++ L   N   + V+DD    +GIV   DLL+
Sbjct: 128 EIEPYYQRNVSVVWKGTPLKAALKALLLCNAMAIPVIDDDGNLVGIVDETDLLK 181



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 52/113 (46%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIFRNFHKDLNTLS 284
                 ++++      A+ +  + +     VV  G K L GI++   +  N  +D   + 
Sbjct: 7   MTPDPVVIELPATRGYALELFKKHKVRSFPVVRRGNKELVGIVSIKRVLVNPDEDQLAML 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+    ++  V+     L  A++L+  ++   ++VV+D  K +GI+   D++R
Sbjct: 67  VK----RDVPVVKPTDDLKKAVRLMLDYDYRRVIVVNDDGKVVGILTVGDIIR 115



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFL 333
           + V+ +M  +P VI        A++L ++H +    VV    K  +GIV   
Sbjct: 1   MKVKSIMTPDPVVIELPATRGYALELFKKHKVRSFPVVRRGNKELVGIVSIK 52


>gi|16081428|ref|NP_393769.1| hypothetical protein Ta0289 [Thermoplasma acidophilum DSM 1728]
 gi|10639432|emb|CAC11434.1| conserved hypothetical protein [Thermoplasma acidophilum]
          Length = 178

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 56/126 (44%), Gaps = 5/126 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +F+    +M+S      V     + DA+ I++E     + V D+     G+++E  I + 
Sbjct: 1   MFMRVEKIMNSNFKT--VNWNTTVFDAVKIMNENHLYGLVVKDDNGNDVGLLSERSIIKR 58

Query: 276 F---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           F   +K  + + +  VM K    +  D  +      L ++ +    VVDD  + +GIV  
Sbjct: 59  FIPRNKKPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDSGRVVGIVTL 118

Query: 333 LDLLRF 338
            DL R+
Sbjct: 119 TDLSRY 124



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 25/59 (42%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +     IP VK    + D    LSE      AVVD+  ++ GI+T  D+ R   +
Sbjct: 69  VPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDDSGRVVGIVTLTDLSRYLSR 127


>gi|255026225|ref|ZP_05298211.1| hypothetical protein LmonocytFSL_07490 [Listeria monocytogenes FSL
           J2-003]
          Length = 361

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 44  IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 103

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 104 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 154

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 155 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 210

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 211 VKDDLTLIGIVSRQDILK 228


>gi|226944571|ref|YP_002799644.1| CBS domain pair-containing protein [Azotobacter vinelandii DJ]
 gi|226719498|gb|ACO78669.1| CBS domain pair-containing protein [Azotobacter vinelandii DJ]
          Length = 137

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  ++I   L +A  ++ +   G + V +EG +L G++T+ DI  R   +D     
Sbjct: 7   MTRDVQTIRIDQTLREAAEMMEKIDCGALLV-NEGDRLVGMLTDRDIAIRAVARDRGCDT 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  N     +D  +    + +   ++  L V++  ++ +G+V   ++
Sbjct: 66  PVREVMTPNVCYCFDDEDVQHVAENMADIHVRRLPVMNREKRLVGVVSLGNI 117



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 30/53 (56%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ++D+M ++ + I  D  L  A +++ + +   L+V ++  + +G++   D+
Sbjct: 1   MKIQDIMTRDVQTIRIDQTLREAAEMMEKIDCGALLV-NEGDRLVGMLTDRDI 52


>gi|329905076|ref|ZP_08274004.1| Phosphogluconate repressor HexR, RpiR family [Oxalobacteraceae
           bacterium IMCC9480]
 gi|327547748|gb|EGF32524.1| Phosphogluconate repressor HexR, RpiR family [Oxalobacteraceae
           bacterium IMCC9480]
          Length = 293

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 66/164 (40%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +++L              A++ +   + ++   G G SG I +        +G P+ 
Sbjct: 99  SRSINALLDLRNTLDPAAIERALDLLAKAR-KIEFYGQGSSGIIATDAQHKFFRSGVPTV 157

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        ++ + D+++ +S  G+S  L   +  AR+    +IA++      +A 
Sbjct: 158 AYSDPHIHSIAASLLKKGDVVLAISQRGNSVALLRSVQLARKVGADVIALSPSGT-PLAD 216

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            A +++ +     + P+   P ++ +  L + D LA+ L   R 
Sbjct: 217 LATVLVPIDLHFHTDPY--TPISARLAHLVVIDILAVGLALRRG 258


>gi|311071004|ref|YP_003975927.1| 6-phospho-3-hexuloisomerase [Bacillus atrophaeus 1942]
 gi|310871521|gb|ADP34996.1| 6-phospho-3-hexuloisomerase [Bacillus atrophaeus 1942]
          Length = 185

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  S       +     + I +   ++   G G+SG +    A  +   G  ++ V 
Sbjct: 11  LNELNRSASFIADDEADKLADHILSS-NQIFTAGAGRSGLMAKSFAMRMMHLGLNAYIVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DL+I+ S SG +  L      AR     + A+T   +S +   +D
Sbjct: 70  ETLTPP-----LHDGDLVIIGSGSGETKNLIHTAEKARSLKAVIAALTINPESSIGSQSD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           +++ +P  P+    G    + P  S   Q      DA+ + ++E +  +    +  H
Sbjct: 125 LIIKMPGSPKDKSEGDYKTIQPMGSLFEQTLLLFYDAVILKIMEKKGLNSQTMFTKH 181


>gi|283778771|ref|YP_003369526.1| CBS domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283437224|gb|ADB15666.1| CBS domain containing protein [Pirellula staleyi DSM 6068]
          Length = 177

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 52/117 (44%), Gaps = 9/117 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
                  V      +  + +   KRF  + V  +G  L G+I++ DI R F  +      
Sbjct: 33  MTPGPTCVDPDATAMQLVELFDSKRFRHLLVT-QGTTLVGVISDRDIGRLFGMEESPERN 91

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            L  ++  ++M ++  V+   T L+ A++L+    IS L VV    + +G+V   DL
Sbjct: 92  YLAGITAGELMSEDLVVVDPTTPLSEAVRLIVDEGISCLPVV-VAGQPVGVVTSTDL 147



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 274 RNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   ++ L  L+  D+M   P  +  D      ++L        L+V       +G++  
Sbjct: 17  RTLSENRLQKLTAADIMTPGPTCVDPDATAMQLVELFDSKRFRHLLVT-QGTTLVGVISD 75

Query: 333 LDLLRF 338
            D+ R 
Sbjct: 76  RDIGRL 81



 Score = 36.0 bits (82), Expect = 8.4,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
             + + +V    PL +A+ ++ ++   C+ VV    +  G++T  D++    + L+ + 
Sbjct: 102 MSEDLVVVDPTTPLSEAVRLIVDEGISCLPVVVA-GQPVGVVTSTDLYLALEQLLSCIP 159


>gi|257415643|ref|ZP_05592637.1| CBS domain-containing protein [Enterococcus faecalis AR01/DG]
 gi|257157471|gb|EEU87431.1| CBS domain-containing protein [Enterococcus faecalis ARO1/DG]
          Length = 209

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 52/120 (43%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G+++  D+ R   + ++
Sbjct: 76  KVQEIMSPPLMVAQETSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRASLNTNI 135

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 136 DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 195



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 35/60 (58%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V+++M   P ++ ++T +  A+  L  +++  L V+D+ ++ +G++   DLLR 
Sbjct: 71  DVFQTKVQEIMSP-PLMVAQETSIRDAITNLFMYDVGSLYVMDEAKELLGVLSRKDLLRA 129


>gi|224477621|ref|YP_002635227.1| putative RpiR family transcriptional regulator [Staphylococcus
           carnosus subsp. carnosus TM300]
 gi|222422228|emb|CAL29042.1| putative RpiR family transcriptional regulator [Staphylococcus
           carnosus subsp. carnosus TM300]
          Length = 288

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/161 (24%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R   +LE++            V+K+  ++ ++V+ G+G S  +   +       G    
Sbjct: 103 SRAAYTLETTEVLLEDQALEALVDKLYDVQ-KIVVFGVGASHIVAEDIYQKFTRAGMEVI 161

Query: 95  FVHAAEASHGDLGMITRDDLIIVL--SWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
               A      L    + D ++ +  S SG + E   + + A  +   + AITS + S +
Sbjct: 162 QSADAHVLATVLAGYHKKDNVLFIGVSNSGHNQETLRLAHVAHYYGATVAAITSRSDSKL 221

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A  ADIVL L          LA T+S I QL   D L    
Sbjct: 222 AGEADIVL-LHDASSEKSLRLAATSSLIAQLMTVDILFYTY 261


>gi|150402423|ref|YP_001329717.1| signal-transduction protein [Methanococcus maripaludis C7]
 gi|150033453|gb|ABR65566.1| putative signal-transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 186

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
               +  V +     D   IL +K  GC+ V+++  K   IITE D+             
Sbjct: 11  MSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVSIITERDLALGVASRNLKSKE 70

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             VE++       I   + +  A + +   N+  L V+D  +  +GIV   D+ + 
Sbjct: 71  VIVEEIASPKLIAIAPKSTIMDAARKMDLENVKRLPVIDGDE-LLGIVTVSDITKL 125



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 24/54 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            LSV + M      +  DT       +L+   I  L+V++D  K + I+   DL
Sbjct: 4   ELSVTEAMSTPVATVTLDTTAYDVANILKDKGIGCLVVLNDAGKPVSIITERDL 57


>gi|119385743|ref|YP_916798.1| signal-transduction protein [Paracoccus denitrificans PD1222]
 gi|119376338|gb|ABL71102.1| putative signal-transduction protein with CBS domains [Paracoccus
           denitrificans PD1222]
          Length = 146

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---T 282
           +   +  + +   L+ A   L E     + V D   +L G++T+ D+ R   +      T
Sbjct: 10  ARRHLQSIDVNAALLQAARRLGEGC-DMLLVCDAAGRLAGVLTKTDVVRQTGRCTGASCT 68

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V + M ++   +  D  L     +++      + +VD  +  +G+++  D+L+
Sbjct: 69  APVIEAMTRDVTTVTPDGWLQDVWDIMKARGFKNIPIVDANRHPLGVLNARDVLQ 123


>gi|332795991|ref|YP_004457491.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
 gi|332693726|gb|AEE93193.1| putative signal transduction protein with CBS domains [Acidianus
           hospitalis W1]
          Length = 245

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K+      A     +   +  V     + +A+ I++ K+ G + +   G+ L+GI TE D
Sbjct: 58  KMEDNVFEARADEIATKGVITVDENEEVGNAVRIMASKKIGSLVIT-SGKVLRGIFTERD 116

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R   K   +  VE +M  +   I  D  L  A +L+    +  L VV   ++  GI+ 
Sbjct: 117 VIRLLSKMTFSGLVESIMSTDVITIPSDVDLLFASKLMEYEGVRRLPVV-RGKEVEGIIT 175

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 176 AADIVKA 182



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 7/111 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     L+ A  ++  +    + VV  G++++GIIT  DI +   K L+   V
Sbjct: 134 MSTDVITIPSDVDLLFASKLMEYEGVRRLPVV-RGKEVEGIITAADIVKALAKGLH--MV 190

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++  +NP  +  D  +  A++++ +  I  L+V        GIV   D+L
Sbjct: 191 NEIETRNPIGVRSDDPIMKAVRIMNEKRIGSLLV----DGIKGIVTERDVL 237


>gi|320352509|ref|YP_004193848.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
 gi|320121011|gb|ADW16557.1| CBS domain containing membrane protein [Desulfobulbus propionicus
           DSM 2032]
          Length = 227

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 56/131 (42%), Gaps = 15/131 (11%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-- 275
           +    +MH+      V     L++A  +++  +   + VV    +L G++++ D+ +N  
Sbjct: 1   MYIGQIMHTKLIT--VSPETTLVEARELIAMHQIEHLLVVSNRGRLVGVVSDRDLKQNWA 58

Query: 276 ----------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                      H  L  + V  +M++  K +  +T +  A  +++   I  L V+     
Sbjct: 59  SPATALSAHELHYLLEKVEVGMIMVRTVKTVTPETTIERAASIMQAEKIGSLPVM-VGDT 117

Query: 326 AIGIVHFLDLL 336
            +GIV   D++
Sbjct: 118 LVGIVTSTDVM 128


>gi|251779034|ref|ZP_04821954.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
 gi|243083349|gb|EES49239.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum E1 str. 'BoNT E Beluga']
          Length = 375

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D+         L+  +  +   +   + V+D+   L GI+T   I  N  +   ++ V
Sbjct: 254 MIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVTAKQIQNNTDR---SVPV 310

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E++M  +      D  +   ++L++++ IS L VVDD     GI+ 
Sbjct: 311 ENIMNSDFIKASPDDTIIDILELVKENKISRLPVVDDGGSLRGIIT 356



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V+D+MI NP    ++  L   ++ +R   +  LMV+D     +GIV 
Sbjct: 249 KVKDIMIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVT 296



 Score = 36.0 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/64 (18%), Positives = 23/64 (35%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                              +ID + ++ E +   + VVD+G  L+GIIT+  +     + 
Sbjct: 308 VPVENIMNSDFIKASPDDTIIDILELVKENKISRLPVVDDGGSLRGIITKSSLVTTLSQQ 367

Query: 280 LNTL 283
               
Sbjct: 368 FLDT 371


>gi|86358048|ref|YP_469940.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
           etli CFN 42]
 gi|86282150|gb|ABC91213.1| putative inosine-5`-monophosphate dehydrogenase protein [Rhizobium
           etli CFN 42]
          Length = 145

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 45/117 (38%), Gaps = 3/117 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT 282
                + +      L D  +++     G + V  E  +L G+IT+ DI            
Sbjct: 6   CMTTDVQITDPEHTLRDVASMMGRLDAGVLPV-GENDRLVGMITDRDIAIRGVAEGKGPD 64

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V DVM  + K   +D  +   +  +    +  L V++  ++ +GI+   DL   G
Sbjct: 65  AKVRDVMSTDVKYCFDDEDVEDVLHNMGDLQVRRLPVLNRSKRLVGIISLGDLAMKG 121



 Score = 36.0 bits (82), Expect = 8.0,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V + M  + ++   +  L     ++ + +  VL V  +  + +G++   D+   G+
Sbjct: 1   MKVSNCMTTDVQITDPEHTLRDVASMMGRLDAGVLPV-GENDRLVGMITDRDIAIRGV 57


>gi|59712578|ref|YP_205354.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
 gi|197335338|ref|YP_002156799.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
 gi|59480679|gb|AAW86466.1| acetoin utilization AcuB protein [Vibrio fischeri ES114]
 gi|197316828|gb|ACH66275.1| acetoin utilization AcuB protein [Vibrio fischeri MJ11]
          Length = 147

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 13/134 (9%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                D+M +     L      L DA  ++ E     + +VD    L G++T+ D+    
Sbjct: 1   MFTVKDMMTTHPHTLLRSH--SLEDAKALMDEHCIRHIPIVDTDGALIGLVTQRDLLSAQ 58

Query: 277 HKDLNTLSVEDV----------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
              L   + E+V          M +N   I     L  A   +++H +  L VV +  K 
Sbjct: 59  SSCLEKPTFEEVSTLDIPLNSIMHENVMSIAPYGGLKEAALFMQKHKVGCLPVV-ERGKL 117

Query: 327 IGIVHFLDLLRFGI 340
           +GI+   D +   I
Sbjct: 118 VGIITDSDFVSIAI 131


>gi|308094796|ref|ZP_07663052.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
 gi|308093340|gb|EFO43035.1| cyclic nucleotide-binding protein [Vibrio parahaemolyticus AN-5034]
          Length = 357

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 51/119 (42%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---------KGIITEGDI-FRNFHKDL 280
           P +  G  +  A  ++++     + +VD    L          GIIT+ D+  R   + L
Sbjct: 161 PTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVLGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 221 SPQDDVSTVMTTEVISLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 278



 Score = 39.1 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---------QKAI 327
             DL T  V+ ++  +   I     +  A QL+ Q NIS L++VD              +
Sbjct: 144 ANDLTTSKVKTLLTGDAPTINRGQTIQQAAQLMAQDNISSLLIVDPDFVLDEDDPQSPVL 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|119897323|ref|YP_932536.1| hypothetical protein azo1032 [Azoarcus sp. BH72]
 gi|119669736|emb|CAL93649.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 149

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +  +     L +A+TI++E+  G + VV    ++ G++T  ++ +  HK    
Sbjct: 7   LAIKGKVLYTIAPNRSLAEAVTIMTEQDVGSL-VVFAQGQMAGLLTFREVLQAVHKGGGG 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +L VE  M+K P        +    +L+   +   L V+D     +G+V F D+ + 
Sbjct: 66  WESLPVETAMLKGPLTAAPTMEMDELRRLMVDRHQRYLPVMD-GNTLLGVVSFHDVAKA 123


>gi|86609597|ref|YP_478359.1| chloride channel (ClC) family protein [Synechococcus sp.
           JA-2-3B'a(2-13)]
 gi|86558139|gb|ABD03096.1| chloride transporter, chloride channel family [Synechococcus sp.
           JA-2-3B'a(2-13)]
          Length = 623

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 62/127 (48%), Gaps = 8/127 (6%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G LG      +          L++   PL +A+  L +++     VVD  ++L+GI+T  
Sbjct: 452 GVLGQEPRELTVQEVMVPPSLLLRQDTPLREALESLLQQKCHSALVVDGQERLRGILTLE 511

Query: 271 DIFRNF----HKDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVV--DDC 323
           D+ R        +L  L+V++V  ++P      D  + VA + + ++++  L VV  +D 
Sbjct: 512 DLERALAHKEAAELAELTVQEV-SQSPVLTTFPDEAVAVAAEPMYEYDLRQLPVVSREDP 570

Query: 324 QKAIGIV 330
           ++ +G++
Sbjct: 571 EQIVGLL 577



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 33/63 (52%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++   L+V++VM+    ++ +DT L  A++ L Q      +VVD  ++  GI+   DL
Sbjct: 454 LGQEPRELTVQEVMVPPSLLLRQDTPLREALESLLQQKCHSALVVDGQERLRGILTLEDL 513

Query: 336 LRF 338
            R 
Sbjct: 514 ERA 516


>gi|325697239|gb|EGD39125.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK160]
          Length = 280

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/163 (17%), Positives = 57/163 (34%), Gaps = 4/163 (2%)

Query: 13  RKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI 72
           ++  S  KN +       +      L+   S +  E   QF    + +    GRV I G 
Sbjct: 76  QESSSESKNVSRDLTRNVLSDYGELLNKTFSLIDEE---QFLRVGDMLNNA-GRVYIYGQ 131

Query: 73  GKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILY 132
           G SG +  ++       G     +        +  M+  D L+I +S SG +  +   + 
Sbjct: 132 GSSGLVAREMEFRFMRLGMVCKAITDDHMIRVNRVMLDSDCLVIGISISGETKIITQAIQ 191

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
            A++     + +TS N   +    D ++ +  +          
Sbjct: 192 NAKKVGAKTVLVTSNNSDDLRQQCDELVLVAVKKHLAQGNNIS 234


>gi|295838129|ref|ZP_06825062.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
 gi|295826874|gb|EFG65117.1| RpiR family transcriptional regulator [Streptomyces sp. SPB74]
          Length = 257

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   ++L          AV  +   + R+ I G+G S  +   L   L   G  +
Sbjct: 70  ERQTLADTAANLDT---AALGAAVTALAQAR-RIDIYGVGASHLVAQDLGQKLLRIGLFA 125

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ + ++ SGS+ ++   L  A       IAIT       A
Sbjct: 126 QAHADPHLAITNAVQLRGKDVAVAITHSGSTSDVVEPLRAAFERGATTIAITGRPDGSAA 185

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT            A  +S   Q  + D L + + + 
Sbjct: 186 QYADHVLTT-VAARESELRPAAMSSRASQHLVVDCLFVGVAQR 227


>gi|270156631|ref|ZP_06185288.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|289164917|ref|YP_003455055.1| CBS domain protein [Legionella longbeachae NSW150]
 gi|269988656|gb|EEZ94910.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|288858090|emb|CBJ11952.1| CBS domain protein [Legionella longbeachae NSW150]
          Length = 149

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/120 (15%), Positives = 54/120 (45%), Gaps = 6/120 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIF-RNFHKDL 280
           +    + ++     + +A  ++     G + +++E +      GI+T+ D+        +
Sbjct: 6   YCNRDVVVINCNESVKNAAELMRHYHVGDLVLIEEQKNQKTPIGIVTDRDLVIEVMAAGI 65

Query: 281 --NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +L ++D++ +    + E+  L  A++L+    I  L V+++ +  +GI+   D +  
Sbjct: 66  APESLLIKDIVTEPFSSVFENDNLLDALELMHSKKIRRLPVINNDKALVGIITLDDFIEI 125



 Score = 39.1 bits (90), Expect = 0.91,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     L+DA+ ++  K+   + V++  + L GIIT  D      +++  
Sbjct: 83  VFENDNLLDALELMHSKKIRRLPVINNDKALVGIITLDDFIEILAENMAK 132



 Score = 36.0 bits (82), Expect = 8.6,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK---AIGIVHFLDLL 336
           V +   ++  VI  +  +  A +L+R +++  L+++++ +     IGIV   DL+
Sbjct: 3   VGEYCNRDVVVINCNESVKNAAELMRHYHVGDLVLIEEQKNQKTPIGIVTDRDLV 57


>gi|113953851|ref|YP_730930.1| CBS domain-containing protein [Synechococcus sp. CC9311]
 gi|113881202|gb|ABI46160.1| CBS domain protein [Synechococcus sp. CC9311]
          Length = 156

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/133 (24%), Positives = 55/133 (41%), Gaps = 27/133 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKD------------ 279
           V     L DA+++LS+     + VVD+   L G +TE D+  R    D            
Sbjct: 18  VTPETALKDAVSLLSDHHISGLPVVDKSGLLIGELTEQDLMVRESGVDAGPYVMLLDSVI 77

Query: 280 --------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                         +   +V D+M ++    LE   L  A  LL + +   L+VVDD + 
Sbjct: 78  YLKNPLNWDKQVHQVLGTTVGDLMGRDLHSCLESLPLPKAASLLHERSTQRLIVVDDDKH 137

Query: 326 AIGIVHFLDLLRF 338
            +G++   D++R 
Sbjct: 138 PVGVLTRGDIVRA 150



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 29/57 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +V++VM      +  +T L  A+ LL  H+IS L VVD     IG +   DL+
Sbjct: 2   VLQQTVKEVMSSPVLTVTPETALKDAVSLLSDHHISGLPVVDKSGLLIGELTEQDLM 58



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            G  +       PL  A ++L E+    + VVD+ +   G++T GDI R   
Sbjct: 101 MGRDLHSCLESLPLPKAASLLHERSTQRLIVVDDDKHPVGVLTRGDIVRALA 152


>gi|303233288|ref|ZP_07319959.1| inosine 5-monophosphate dehydrogenase [Atopobium vaginae
           PB189-T1-4]
 gi|302480588|gb|EFL43677.1| inosine 5-monophosphate dehydrogenase [Atopobium vaginae
           PB189-T1-4]
          Length = 504

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 55/166 (33%), Gaps = 8/166 (4%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
            P  S+IMQ   G  LAIAL +    S   +    P  +   +    S       S   +
Sbjct: 52  IPLVSSIMQAVSGTRLAIALAQQGGISF-IYGSQAPESEAQMVREVKSYKAGFVVSDSTL 110

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
                L D + +        + V + G    +  GI+T  D      +D     V + M 
Sbjct: 111 TPDMCLADVLELKERTGHTTMPVTENGLPQGRFCGIVTSRDYR--VSRDDPNKPVREFMT 168

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     DT L     ++ +  I+ L +VD       +V   D
Sbjct: 169 PANECVTATPDTSLKECNDIIWEKKINALPIVDAKGNLSSLVFRKD 214


>gi|254434216|ref|ZP_05047724.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
 gi|207090549|gb|EDZ67820.1| CBS domain pair protein [Nitrosococcus oceani AFC27]
          Length = 267

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMIKNPKV 295
           +++A   +     G + VV +  ++ GI+T+ D+  R      D    ++ +VM  +P +
Sbjct: 1   MLEAARAMENNSIGAI-VVQDHGRIVGIVTDRDLAVRALGHKLDPENTAITEVMTPSPLM 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +        A+ L++Q N+  +  + +  + +G+V   DLL
Sbjct: 60  LTLADSREEAIALMQQGNVRRIP-LSENNRVVGMVTLDDLL 99


>gi|126465296|ref|YP_001040405.1| hexulose-6-phosphate isomerase [Staphylothermus marinus F1]
 gi|126014119|gb|ABN69497.1| hexulose-6-phosphate isomerase [Staphylothermus marinus F1]
          Length = 202

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 73/196 (37%), Gaps = 27/196 (13%)

Query: 35  KRGLSSLESSLQGELS----FQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLA 87
           +  ++ + S +   +      + +  VE++        R+++ G G+SG +G   A  L 
Sbjct: 7   REAMAEIASFIFKAIDVISEDEKNKMVEELVDAYRRGARILVMGAGRSGLVGKAFAMRLL 66

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G   + +            I   DL++ +S SG +  +      A+     +IAIT+ 
Sbjct: 67  HMGFQVYVLGETIVP-----RIREGDLVVAISGSGRTRLIVTAAEAAKTVGAKVIAITTY 121

Query: 148 NKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIA 192
             S +   ADI++ +P   +                  LAP  +      +   D + + 
Sbjct: 122 PDSPLGKIADIIVRIPGRTKIAKEEDYFTRQILGIHEPLAPLGTLFEDTTMVFLDGIVVE 181

Query: 193 LLESRNFSENDFYVLH 208
           L++    +E D    H
Sbjct: 182 LMKKLGKTEEDLKNEH 197


>gi|83945661|ref|ZP_00958007.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
 gi|83851027|gb|EAP88886.1| CBS domain protein [Oceanicaulis alexandrii HTCC2633]
          Length = 143

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIK 291
               L +A   L++ R G V V D G +  G+ +E D+ R       +     VE VM  
Sbjct: 19  PSQTLQEAAVALTQHRVGAVIVTDAGDQPVGVFSERDLARAIAGSGPSALSERVESVMST 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                     +   + L+ +  +  ++++D+  +  G+V   D+++  I
Sbjct: 79  GLITASPSDDIDTLLALMTEKRVRHIIIMDE-GRMTGVVSIGDVVKRKI 126



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 18/44 (40%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +     L  A   L QH +  ++V D   + +G+    DL R 
Sbjct: 16  TLAPSQTLQEAAVALTQHRVGAVIVTDAGDQPVGVFSERDLARA 59


>gi|255523407|ref|ZP_05390376.1| putative signal transduction protein with CBS and DRTGG domains
           [Clostridium carboxidivorans P7]
 gi|296184690|ref|ZP_06853101.1| DRTGG domain protein [Clostridium carboxidivorans P7]
 gi|255512865|gb|EET89136.1| putative signal transduction protein with CBS and DRTGG domains
           [Clostridium carboxidivorans P7]
 gi|296050472|gb|EFG89895.1| DRTGG domain protein [Clostridium carboxidivorans P7]
          Length = 433

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              S   +K    + +   I+ E +     VVDE  KL G++T     +    + +   V
Sbjct: 194 METSPYFLKCSNTVGEWKKIMMETKHQRYPVVDEEGKLTGVVT----LKELSNNDDCELV 249

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +M + P  +   T +  A  ++    I +  VV   +  IG++   D+++ 
Sbjct: 250 GKIMHREPITVTPKTTVAYAAHIMAWEGIEMFPVV-KGKTLIGVITRRDVIKA 301



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 23/51 (45%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VED+M  +P  +     +    +++ +       VVD+  K  G+V   +L
Sbjct: 190 VEDIMETSPYFLKCSNTVGEWKKIMMETKHQRYPVVDEEGKLTGVVTLKEL 240


>gi|168045635|ref|XP_001775282.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673363|gb|EDQ59887.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 151

 Score = 72.2 bits (176), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 3/90 (3%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
                + VVD   K  G++++ D  +  +       V+DVM      +  D +++ A  L
Sbjct: 60  YDISGLPVVDHEHKCVGVLSKKDRSKTSN---LKTKVKDVMTTPAITLPADKVVSDAAVL 116

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++ I  + +V++  + +GIV   D+   
Sbjct: 117 MLKNKIHRIPIVNEKNQVVGIVTRTDIFSA 146



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            D+M +       +  L    +    ++IS L VVD   K +G++   D
Sbjct: 36  ADIMSRTIITASPEQSLEEVDRYF--YDISGLPVVDHEHKCVGVLSKKD 82



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 21/46 (45%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                + DA  ++ + +   + +V+E  ++ GI+T  DIF      
Sbjct: 105 PADKVVSDAAVLMLKNKIHRIPIVNEKNQVVGIVTRTDIFSALEGG 150


>gi|327478857|gb|AEA82167.1| transcriptional regulator, RpiR family [Pseudomonas stutzeri DSM
           4166]
          Length = 288

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 60/179 (33%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S    AL+        L  +   L  +       A+  +   + RV   G G SG + 
Sbjct: 88  NDSVADFALKIFDTTLHTLMEVRERLDPD---ALQRAITAMAKAE-RVEFYGFGASGAVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +            +               +   D+ I +S SG S +L       R    
Sbjct: 144 TDAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANVVRESGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LI +       +A  A I L +  + ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 204 TLITLCPSQT-PLAELATINLAIDVQEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|320547323|ref|ZP_08041614.1| CBS domain protein [Streptococcus equinus ATCC 9812]
 gi|320448021|gb|EFW88773.1| CBS domain protein [Streptococcus equinus ATCC 9812]
          Length = 221

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 48/118 (40%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  ++ E+    + V+ E  +L GI+TE  +                +  L
Sbjct: 16  VSPDTTVAYAADMMREQGLRRLPVI-ENDRLVGIVTERTMAEASPSKATSLSIYEMNYLL 74

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+M ++   +     L  A+  + +H + +L VV +  +  G++   D+ + 
Sbjct: 75  NKTKIRDIMSRDVITVSPYASLEDAVYAMMKHRVGILPVV-EHGRVHGVITEKDVFKA 131



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    +  DT +  A  ++R+  +  L V+++  + +GIV 
Sbjct: 3   MAVKDFMTRKVVYVSPDTTVAYAADMMREQGLRRLPVIEND-RLVGIVT 50


>gi|300087970|ref|YP_003758492.1| peptidase M50 [Dehalogenimonas lykanthroporepellens BL-DC-9]
 gi|299527703|gb|ADJ26171.1| peptidase M50 [Dehalogenimonas lykanthroporepellens BL-DC-9]
          Length = 372

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 66/166 (39%), Gaps = 6/166 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +     A+  +     L +AL+    F  +     +    +  +         +  ++  
Sbjct: 200 MIFGGVALAFVVGISGLWLALIGW--FLASAATASYQQTIVSEVISGVRVRDVANQAVIN 257

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK- 291
           V        A+  +S      + VV  G +L G+IT  D+      D ++++VE +M   
Sbjct: 258 VGPEISGEQALAAMSRHSQRALPVVI-GGRLVGLITLADLKHISLHDGSSVTVEQIMTPL 316

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                +  D  ++ A+Q+L +   + L V+++  +  G++   D++
Sbjct: 317 EKLSTLNPDDDMSKALQILTESGYNQLPVIEE-GRVSGLLTRSDII 361


>gi|227511946|ref|ZP_03941995.1| 3-hexulose-6-phosphate isomerase [Lactobacillus buchneri ATCC
           11577]
 gi|227084849|gb|EEI20161.1| 3-hexulose-6-phosphate isomerase [Lactobacillus buchneri ATCC
           11577]
          Length = 180

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/170 (17%), Positives = 62/170 (36%), Gaps = 9/170 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + + G +  +     E +     R+ + G G+SG +    A  L   G   + +      
Sbjct: 12  NQVMGMIDEKQLKDAESVIQKDKRIFVLGAGRSGLMAKGFAMRLMHIGYTVYAIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG +  +  +   A+   + ++A+TS + S +    D+ + +
Sbjct: 72  -----SIQAGDVLVAVSGSGKTSSILELTEKAKNDGVKVVAVTSHSDSPLGKLGDVTIVV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           P   ++        L  T          D L + L    + S +     H
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQSVHITLDVLCLMLSRRDHVSNDTAKATH 176


>gi|217964276|ref|YP_002349954.1| CBS domain protein [Listeria monocytogenes HCC23]
 gi|217333546|gb|ACK39340.1| CBS domain protein [Listeria monocytogenes HCC23]
 gi|307571157|emb|CAR84336.1| CBS domain protein [Listeria monocytogenes L99]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|318062379|ref|ZP_07981100.1| RpiR family transcriptional regulator [Streptomyces sp. SA3_actG]
          Length = 291

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   ++L          AV  +   + R+ I G+G S  +   L   L   G  +
Sbjct: 104 ERQTLADTAANLDT---AALGAAVTALAQAR-RIDIYGVGASHLVAQDLGQKLLRIGLFA 159

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ + ++ SGS+ ++   L  A       IAIT       A
Sbjct: 160 QAHADPHLAITNAVQLRGKDVAVAITHSGSTSDVVEPLRAAFERGATTIAITGRPDGSAA 219

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT            A  +S   Q  + D L + + + 
Sbjct: 220 QYADHVLTT-VAARESELRPAAMSSRASQHLVVDCLFVGVAQR 261


>gi|291279467|ref|YP_003496302.1| polyA polymerase family protein [Deferribacter desulfuricans SSM1]
 gi|290754169|dbj|BAI80546.1| polyA polymerase family protein [Deferribacter desulfuricans SSM1]
          Length = 879

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  + +     +A+ I  +     + VV +  K  G+I+  DI +     L    V
Sbjct: 313 MTSPVKYIDVDSKFEEALDIFMKYNLNGMPVV-KDGKTVGLISRKDILQGMKHGLKNEKV 371

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +M      +  DT  +V   ++ +     L+ V++  + +G++   D LR 
Sbjct: 372 SSIMQTEFFTVKPDTPFSVVEDIILEKR-QKLVPVEEDGRLVGVITRTDFLRA 423



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D M    K I  D+    A+ +  ++N++ + VV    K +G++   D+L+
Sbjct: 309 AMDFMTSPVKYIDVDSKFEEALDIFMKYNLNGMPVV-KDGKTVGLISRKDILQ 360



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/88 (28%), Positives = 32/88 (36%), Gaps = 13/88 (14%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G K G      S +M +      VK   P      I+ EKR   V V +E  +L G+IT
Sbjct: 360 QGMKHGLKNEKVSSIMQTEFFT--VKPDTPFSVVEDIILEKRQKLVPV-EEDGRLVGVIT 416

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             D  R   +            K PK I
Sbjct: 417 RTDFLRAMAEL----------NKTPKYI 434


>gi|255657199|ref|ZP_05402608.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-23m63]
 gi|296451961|ref|ZP_06893676.1| sigma-54 dependent transcriptional regulator [Clostridium difficile
           NAP08]
 gi|296879645|ref|ZP_06903622.1| sigma-54 dependent transcriptional regulator [Clostridium difficile
           NAP07]
 gi|296259152|gb|EFH06032.1| sigma-54 dependent transcriptional regulator [Clostridium difficile
           NAP08]
 gi|296429358|gb|EFH15228.1| sigma-54 dependent transcriptional regulator [Clostridium difficile
           NAP07]
          Length = 586

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
                  +     + DAI  + +     + V+D   +LKGII+  DI      HK     
Sbjct: 14  MDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSGQLKGIISMTDIHNLYEMHKKYEGQ 73

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLL 336
            V+ +M K+   + E   L     ++   NI +L V+    K IG++   H  D L
Sbjct: 74  PVKLIMKKDVIYVNEGLTLDECRDIMILKNIGILPVL-RDNKIIGVLKQEHIRDYL 128



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE+VM      I EDT +  A++ + + N   LMV+D   +  GI+   D+ 
Sbjct: 8   KKVEEVMDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSGQLKGIISMTDIH 61


>gi|310820605|ref|YP_003952963.1| cystathionine beta-synthase [Stigmatella aurantiaca DW4/3-1]
 gi|309393677|gb|ADO71136.1| Cystathionine beta-synthase [Stigmatella aurantiaca DW4/3-1]
          Length = 138

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVM 289
           ++    L DA   + ++ FG + V    QK+ G++T+ DI  +   +  D     V D++
Sbjct: 10  IRPDQTLTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIVFQAIAERLDPQQTPVSDIL 68

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + P +   ED  L  A +L+ +H +  L V+D  Q  +G+V   D+ R 
Sbjct: 69  SEGPPRYAFEDDELATAARLMTEHGLPRLPVLDRHQNLVGMVSLKDVSRE 118



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           VM ++   I  D  LT A + +RQ    +L V    QK IG++   D++
Sbjct: 2   VMNRDVTSIRPDQTLTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIV 49


>gi|186472881|ref|YP_001860223.1| RpiR family transcriptional regulator [Burkholderia phymatum
           STM815]
 gi|184195213|gb|ACC73177.1| transcriptional regulator, RpiR family [Burkholderia phymatum
           STM815]
          Length = 287

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/132 (25%), Positives = 51/132 (38%), Gaps = 4/132 (3%)

Query: 66  RVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           RV   G+G  SG +    A         +     A       G++   D+   +S SG S
Sbjct: 133 RVYFFGVGSGSGLVAQDAALRFLRLDIAAAAFTDAHLQRLYAGLLEPGDVAFAISHSGRS 192

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+   +  A+      IA+T    S +A   DI L L       P+   P  S ++ L 
Sbjct: 193 VEVNESMQIAKERGATTIALT-NVGSRLAWLVDIPLLLRVPSPIDPN--TPGVSRLVHLC 249

Query: 185 IGDALAIALLES 196
           + DALAI +   
Sbjct: 250 VMDALAIGVALR 261


>gi|218509777|ref|ZP_03507655.1| hypothetical protein RetlB5_21050 [Rhizobium etli Brasil 5]
          Length = 259

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 63/183 (34%), Gaps = 13/183 (7%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
            +  T      M    V+ A  ++   +R L                     +   +  +
Sbjct: 64  LQQPTASAPGDMVQELVETARTALEETERLLDR----------DAIQRVSSLLLDAR-HI 112

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
            I G+  S      L   LA  G  +     +  +       + DDL I++S SGS+ + 
Sbjct: 113 EIFGVAASAITAQYLEYKLARLGIQAHIPRDSHLATMASATASADDLYILISSSGSTIDT 172

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
             +   A      +IAIT+  KS +A   D  L           G  P  S I QL I D
Sbjct: 173 LRVAESAHARGAKVIAITNRTKSPLAAICDFKLLASSPETPLTGGAFP--SKISQLLIVD 230

Query: 188 ALA 190
           ALA
Sbjct: 231 ALA 233


>gi|15922439|ref|NP_378108.1| hypothetical protein ST2113 [Sulfolobus tokodaii str. 7]
 gi|15623228|dbj|BAB67217.1| 268aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 268

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 4/117 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLN 281
           +   +   V     L +   I+ EK  G + +V++  K+ G IT  D+            
Sbjct: 133 YMSKNPITVNKDSTLDEVTKIILEKNIGRL-IVEDNGKILGTITTTDLLYLAPVLKFKDL 191

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V++VM     V+ E+  L  A +L+    +  + +V    +  GIV   D++R 
Sbjct: 192 KIKVKEVMTPTIVVMDENEDLNYAAKLMANRKVKGIPIVSANGELKGIVTTTDIVRA 248



 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 56/112 (50%), Gaps = 4/112 (3%)

Query: 228 DSIPLVKIGCPLI--DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-S 284
               ++ +   +   +A  I+ EK+   + V+ +  K+ G+I + D+ + +   +  +  
Sbjct: 70  MKKDIITVNSSIEPLEASQIMIEKKAPLLIVISDTGKILGMIIKSDLAQYYATLIRGIHK 129

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V + M KNP  + +D+ L    +++ + NI  L+V +D  K +G +   DLL
Sbjct: 130 VSEYMSKNPITVNKDSTLDEVTKIILEKNIGRLIV-EDNGKILGTITTTDLL 180



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 54/115 (46%), Gaps = 4/115 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----RNFHKDLNTL 283
               +V+    L+  + I++ +    + V DE +   G I++ D+     R   ++L+++
Sbjct: 5   REPVIVRPHDSLLHTVKIMTMEYVPKLIVADENEIPLGSISQKDVLNFIYRMGDRELDSV 64

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V + M K+   +        A Q++ +    +L+V+ D  K +G++   DL ++
Sbjct: 65  YVSEAMKKDIITVNSSIEPLEASQIMIEKKAPLLIVISDTGKILGMIIKSDLAQY 119


>gi|291087227|ref|ZP_06345764.2| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium sp. M62/1]
 gi|291076032|gb|EFE13396.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium sp. M62/1]
          Length = 304

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 6/178 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +   +  LS   + +      +F      +   K R+ I G G SG  G ++  
Sbjct: 89  DTTKHVLETYQELLSRTYAVVDESQVGRFLD----LLLAKKRIYIYGKGSSGLAGEEMQF 144

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
                G     +  +        +++ + L+I +S SG ++E+   L  A+     ++ +
Sbjct: 145 RFMRIGVNVQAITDSHLMKMHSVLVSDECLVIGISVSGQTEEVIHSLKAAKAQGARVVLM 204

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           TS          D VL    +           +     L + D L    ++S  F + 
Sbjct: 205 TSRRDRSFDAFCDEVLLFAVKEHMENGRAI--SPQFPILILVDILYSHYMQSDRFRKE 260


>gi|261350088|ref|ZP_05975505.1| inosine-5-monophosphate dehydrogenase related protein III
           [Methanobrevibacter smithii DSM 2374]
 gi|288860874|gb|EFC93172.1| inosine-5-monophosphate dehydrogenase related protein III
           [Methanobrevibacter smithii DSM 2374]
          Length = 312

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + D I  +   + G + +VD   KL GI+TE DI  +    L     +D M       
Sbjct: 125 SSIKDTIETMLSNQIGAIPLVDADDKLAGIVTERDIVLSLAGVLTEEVAQDYMSTKVFTT 184

Query: 297 LEDTLLTVAMQLLRQHNISVLMVV-------DDCQKAIGIVHFLDLLRF 338
              T +  A +++ ++ +  + +V          +K +GIV   D++R+
Sbjct: 185 TPGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRY 233



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           +     + D   ++ E  F  + + D G  K+ GI+T  DI   F               
Sbjct: 41  IPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDILDFFGGGKKFNIIEKKYED 100

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    + ++M ++   + + + +   ++ +  + I  + +VD   K  GIV   D+
Sbjct: 101 NFLAAINEPIREIMTRDVICLSDKSSIKDTIETMLSNQIGAIPLVDADDKLAGIVTERDI 160

Query: 336 L 336
           +
Sbjct: 161 V 161



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 21/124 (16%)

Query: 235 IGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHK-----DLNT 282
            G P+  A  I+       + +V          +KL GI+T  DI R F+      +LN+
Sbjct: 186 PGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRYFNAKELFDNLNS 245

Query: 283 LSVEDV--------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  +V        M ++P  + +   +     L  + NI  + V  D +  IGI+   D
Sbjct: 246 NAASEVLKNIVSNIMAEDPITVSQTERIGDICALFAEKNIGGVPVTKDSE-IIGIITEKD 304

Query: 335 LLRF 338
           +L  
Sbjct: 305 ILNA 308



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           +  +  K+   I     +    +++ +H    L + D    K +GIV  +D+L
Sbjct: 30  IMAIASKDVISIPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDIL 82


>gi|94483090|gb|ABF22611.1| CBS domain protein [Ochrobactrum tritici]
          Length = 151

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/139 (22%), Positives = 52/139 (37%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--- 281
                 +V    P+ D   +L   R   V VVDE ++L G++T  D+  R   + L    
Sbjct: 1   MTSDPVVVHPETPVEDIAGLLLAHRINGVPVVDENRRLLGVVTAADLIHRAADERLEPRE 60

Query: 282 -----------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                    +  +VM      +  D    VA +L+  + ++ L 
Sbjct: 61  SLWKENFWISFLGPEGAQPGKAEGRTAAEVMTHEVHSVAPDDHPLVAARLMADYGLTSLP 120

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+ +    IG+V  +DLLR
Sbjct: 121 VI-EAGMVIGVVSRIDLLR 138


>gi|315282510|ref|ZP_07870905.1| conserved protein YtoI [Listeria marthii FSL S4-120]
 gi|313613841|gb|EFR87590.1| conserved protein YtoI [Listeria marthii FSL S4-120]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|288929271|ref|ZP_06423116.1| glucosamine--fructose-6-phosphate aminotransferase [Prevotella sp.
           oral taxon 317 str. F0108]
 gi|288329373|gb|EFC67959.1| glucosamine--fructose-6-phosphate aminotransferase [Prevotella sp.
           oral taxon 317 str. F0108]
          Length = 354

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 5/132 (3%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           VV TG+G S  I    AS     G  + +++ +E  H +L ++ R  L++  S SG S E
Sbjct: 48  VVFTGMGSSFFISFAAASLFNQQGIHAHYINTSELLHYNLSLLNRPTLLVCASQSGESYE 107

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +K +L      S+  + I +E  S +A  AD+ L      E     +  T + ++     
Sbjct: 108 IKEVLERL-PQSVYCVGIVNEEDSALARKADVALLCKGGREE----MTSTKTYVLTSLAA 162

Query: 187 DALAIALLESRN 198
             L + L +  N
Sbjct: 163 CILGLYLSDRWN 174


>gi|262370870|ref|ZP_06064194.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter johnsonii
           SH046]
 gi|262314232|gb|EEY95275.1| inosine-5'-monophosphate dehydrogenase [Acinetobacter johnsonii
           SH046]
          Length = 488

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AIA+ ++         +LH    +         V         
Sbjct: 41  NIPLVSAAMDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V     + + I+I        V VV +  K+ GI+T  D    F  +L    V ++
Sbjct: 96  DPITVTPETTVRELISITQANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 152 MTGQDRLVTVREGESKENIQALLQKHRIEKVLVVGEHNELKGLITVTDFRKA 203


>gi|222445351|ref|ZP_03607866.1| hypothetical protein METSMIALI_00979 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434916|gb|EEE42081.1| hypothetical protein METSMIALI_00979 [Methanobrevibacter smithii
           DSM 2375]
          Length = 312

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + D I  +   + G + +VD   KL GI+TE DI  +    L     +D M       
Sbjct: 125 SSIKDTIETMLSNQIGAIPLVDADDKLAGIVTERDIVLSLAGVLTEEVAQDYMSTKVFTT 184

Query: 297 LEDTLLTVAMQLLRQHNISVLMVV-------DDCQKAIGIVHFLDLLRF 338
              T +  A +++ ++ +  + +V          +K +GIV   D++R+
Sbjct: 185 TPGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRY 233



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 21/121 (17%), Positives = 46/121 (38%), Gaps = 17/121 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           +     + D   ++ E  F  + + D G  K+ GI+T  DI   F               
Sbjct: 41  IPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDILDFFGGGKKFNIIEKKYED 100

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    + ++M ++   + + + +   ++ +  + I  + +VD   K  GIV   D+
Sbjct: 101 NFLAAINEPIREIMTRDVICLSDKSSIKDTIETMLSNQIGAIPLVDADDKLAGIVTERDI 160

Query: 336 L 336
           +
Sbjct: 161 V 161



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 21/124 (16%)

Query: 235 IGCPLIDAITILSEKRFGCVAVV-------DEGQKLKGIITEGDIFRNFHK-----DLNT 282
            G P+  A  I+       + +V          +KL GI+T  DI R F+      +LN+
Sbjct: 186 PGTPIESACKIMVRNGLRRIPIVGGEADISKASKKLLGIVTSTDIIRYFNAKELFDNLNS 245

Query: 283 LSVEDV--------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +  +V        M +NP  + +   +     L  + NI  + V       IGI+   D
Sbjct: 246 NAASEVLKNIVSNIMAENPITVSQTERIGDICALFAEKNIGGVPVT-KDGAIIGIITEKD 304

Query: 335 LLRF 338
           +L  
Sbjct: 305 ILNA 308



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 23/53 (43%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           +  +  K+   I     +    +++ +H    L + D    K +GIV  +D+L
Sbjct: 30  IMAIASKDVISIPPTKSIKDTAKVMMEHEFRRLPIADPGSGKVLGIVTVMDIL 82



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 45/234 (19%), Positives = 82/234 (35%), Gaps = 20/234 (8%)

Query: 45  LQGELSFQFHCAV-EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++ +    F  A+ E I+ I  R VI    KS         T+ S    +  +  A+   
Sbjct: 94  IEKKYEDNFLAAINEPIREIMTRDVICLSDKSSI--KDTIETMLSNQIGAIPLVDADDKL 151

Query: 104 GDLGMITRDDLIIVLSWSGS-SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
              G++T  D  IVLS +G  ++E+       +         T+   + +     I++  
Sbjct: 152 --AGIVTERD--IVLSLAGVLTEEVAQDYMSTK-------VFTTTPGTPIESACKIMVRN 200

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
                    G A  + A  +L     +  +    R F+  + +          +      
Sbjct: 201 GLRRIPIVGGEADISKASKKLL---GIVTSTDIIRYFNAKELFDNLNSNAASEVLKNIVS 257

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            + + + I  V     + D   + +EK  G V V  +   + GIITE DI    
Sbjct: 258 NIMAENPIT-VSQTERIGDICALFAEKNIGGVPVT-KDGAIIGIITEKDILNAI 309


>gi|121606944|ref|YP_984273.1| signal-transduction protein [Polaromonas naphthalenivorans CJ2]
 gi|120595913|gb|ABM39352.1| putative signal-transduction protein with CBS domains [Polaromonas
           naphthalenivorans CJ2]
          Length = 145

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 52/105 (49%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVMI 290
           +    ++ A   + E   G + V   G KL G++T+ DI  R   + L+  T ++ DVM 
Sbjct: 16  RPTDTVVQAAQAMEELNVGVIPVC-AGDKLIGMVTDRDIVVRGVAQGLDAKTTTLADVMS 74

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + + + ED  +   + ++ ++ I  + VVD   + IGI+   D+
Sbjct: 75  SHVRTVREDDDVEDVLDIMGENQIRRMPVVDAQDRLIGILSIGDI 119



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V +VM +  + +     +  A Q + + N+ V+ V     K IG+V   D++  G+
Sbjct: 2   TTVSEVMTRGARSLRPTDTVVQAAQAMEELNVGVIPVC-AGDKLIGMVTDRDIVVRGV 58


>gi|226314909|ref|YP_002774805.1| sugar-phosphate nucleotide transferase [Brevibacillus brevis NBRC
           100599]
 gi|226097859|dbj|BAH46301.1| putative sugar-phosphate nucleotide transferase [Brevibacillus
           brevis NBRC 100599]
          Length = 349

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              LV     ++ A+ I+         VVD+ ++L G IT+GDI R   K       +E 
Sbjct: 5   EKILVSPSTEILRALEIIDSGAKQIGIVVDDNRRLLGTITDGDIRRGLLKGKTLNDPIES 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM   P V          +QL++   +  + V+D+    I +    +L++
Sbjct: 65  VMNPFPIVASIYDSKDNILQLMKFKALRAIPVLDEDGSVIQVETLEELMQ 114


>gi|325286429|ref|YP_004262219.1| putative signal transduction protein with CBS domains [Cellulophaga
           lytica DSM 7489]
 gi|324321883|gb|ADY29348.1| putative signal transduction protein with CBS domains [Cellulophaga
           lytica DSM 7489]
          Length = 154

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
           K    +++ + + ++       V+D    L GII+E D        R F++ +   SVE+
Sbjct: 35  KPDQSILEVMELFTKHNISGGPVLDNNGFLVGIISEADCMKQISESRYFNQPILNKSVEN 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            M ++ + I  D  +  A  +  +HN   L V+      +G +   D++
Sbjct: 95  FMTRDVEFISPDISIFDAAGIFVRHNRRRLPVL-KNDILVGQISRKDVV 142



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 265 GIITEGDIFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           GI +   + +   K+      VED M K       D  +   M+L  +HNIS   V+D+ 
Sbjct: 2   GIKSFQGVRKTVKKEFEAPILVEDYMTKKLITFKPDQSILEVMELFTKHNISGGPVLDNN 61

Query: 324 QKAIGIVHFLDLLR 337
              +GI+   D ++
Sbjct: 62  GFLVGIISEADCMK 75


>gi|325967556|ref|YP_004243748.1| signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
 gi|323706759|gb|ADY00246.1| putative signal-transduction protein with CBS domains [Vulcanisaeta
           moutnovskia 768-28]
          Length = 147

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 50/108 (46%), Gaps = 2/108 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVM 289
            ++    PL  AI +++++    + V  +  K+ GI+T  DI R   K     ++V    
Sbjct: 14  IIIDEDKPLKIAIELMTKENTDYLVVTGKNGKILGIVTANDILRTIVKTGRLDVNVGQCC 73

Query: 290 IKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             N    I  +  +  A  ++ ++ +  L+VVDD  K  G++   D++
Sbjct: 74  SYNKLVTIRLNDSIYKAALIMSEYGVRHLLVVDDSGKPYGVLTSNDVI 121



 Score = 45.3 bits (106), Expect = 0.016,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +V+ V+ +   +I ED  L +A++L+ + N   L+V     K +GIV   D+LR
Sbjct: 2   STTVDKVLRRKGIIIDEDKPLKIAIELMTKENTDYLVVTGKNGKILGIVTANDILR 57



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 31/73 (42%), Gaps = 3/73 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
               S + +  +++   +  A  I+SE     + VVD+  K  G++T  D+     +D  
Sbjct: 70  GQCCSYNKLVTIRLNDSIYKAALIMSEYGVRHLLVVDDSGKPYGVLTSNDV---ICEDRL 126

Query: 282 TLSVEDVMIKNPK 294
              + ++ +  P 
Sbjct: 127 ISRMAELAVPKPV 139


>gi|253577280|ref|ZP_04854598.1| DRTGG domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
 gi|251843284|gb|EES71314.1| DRTGG domain-containing protein [Paenibacillus sp. oral taxon 786
           str. D14]
          Length = 444

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D++     + ++K    + D   +  E       VVDE  ++ GI++    
Sbjct: 190 IKKKIMLVEDIVSRKPRVSMLKATSNISDFDQLSLETGQQHFPVVDEWNRVIGIVS---- 245

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +N  +      +E  M ++P  +   T L  A Q++    I  L VVD  +K +  V  
Sbjct: 246 RKNVEELSGDQPIEKCMTRHPITVGLQTSLASAAQIMVWEGIDFLPVVDRNRKLVSSVTR 305

Query: 333 LDLLRF 338
            ++L+ 
Sbjct: 306 REVLQA 311


>gi|171185076|ref|YP_001793995.1| 6-phospho 3-hexuloisomerase [Thermoproteus neutrophilus V24Sta]
 gi|170934288|gb|ACB39549.1| 6-phospho 3-hexuloisomerase [Thermoproteus neutrophilus V24Sta]
          Length = 202

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/189 (20%), Positives = 75/189 (39%), Gaps = 20/189 (10%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              +      L+ E    F   +E I     ++++ G+G+SG +G   A  L   G  S+
Sbjct: 13  ANFIIHALDKLKIEEVEAFVKTIEDIYRQNKKILVVGVGRSGLVGRAFAMRLRHLGARSY 72

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +            +   DL++ +S SG++  + A    A++    + A+TS   S +A 
Sbjct: 73  VLGETITP-----SVEEGDLLVAISGSGTTQVVVAAAEAAKKMRAKVAAVTSYYDSPLAK 127

Query: 155 HADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNF 199
            AD+VL +P   +                  L+P  +      + + DA+   L++    
Sbjct: 128 TADLVLYVPGRTKLASMDDYFARQILGIHEPLSPLGTLFEDTSMVVLDAVIAELMKRLGK 187

Query: 200 SENDFYVLH 208
           +E+D    H
Sbjct: 188 NESDLAKRH 196


>gi|254828189|ref|ZP_05232876.1| CBS domain-containing protein [Listeria monocytogenes FSL N3-165]
 gi|258600576|gb|EEW13901.1| CBS domain-containing protein [Listeria monocytogenes FSL N3-165]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|167032034|ref|YP_001667265.1| DNA-binding transcriptional regulator HexR [Pseudomonas putida
           GB-1]
 gi|166858522|gb|ABY96929.1| transcriptional regulator, RpiR family [Pseudomonas putida GB-1]
          Length = 290

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 64/164 (39%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++SL+ + Q     Q   AV+ +   + ++   G+G S  +                
Sbjct: 104 ASAIASLDGACQQLDPQQVSRAVDMMIQAR-QIHFFGLGASAPVALDAQHKFFRFNLAVS 162

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        +    DL +++S++G + EL  +   AR     ++ +T+   S +A 
Sbjct: 163 AHADVLMQRMLASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAN 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 ACSLSLHIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|302384536|ref|YP_003820358.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
 gi|302195164|gb|ADL02735.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
          Length = 270

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 2/129 (1%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           G + + G+G SG    +    L+  G     V  +        ++   DLII +S SG +
Sbjct: 120 GNIYVFGVGSSGLTADEFMLRLSRMGFHVQSVTDSHLMLIYSSILGAGDLIIAISISGET 179

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+   +  A++     I +TS   S +A  +D     P              S +  L 
Sbjct: 180 AEVANSVRVAKQNGAKAICLTSFTNSTIAQCSD--FCFPVVNPLFVDQERFVNSQLSALY 237

Query: 185 IGDALAIAL 193
           + D L + L
Sbjct: 238 VIDLLCLVL 246


>gi|284801967|ref|YP_003413832.1| hypothetical protein LM5578_1722 [Listeria monocytogenes 08-5578]
 gi|284995109|ref|YP_003416877.1| hypothetical protein LM5923_1674 [Listeria monocytogenes 08-5923]
 gi|284057529|gb|ADB68470.1| hypothetical protein LM5578_1722 [Listeria monocytogenes 08-5578]
 gi|284060576|gb|ADB71515.1| hypothetical protein LM5923_1674 [Listeria monocytogenes 08-5923]
          Length = 442

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|268316167|ref|YP_003289886.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Rhodothermus marinus DSM 4252]
 gi|262333701|gb|ACY47498.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Rhodothermus marinus DSM 4252]
          Length = 611

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 18/178 (10%)

Query: 39  SSLESSLQGELSFQ--------FHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLA 87
            +LE+ L+G L  Q            +++I A   R++I   G S H   +G  L    A
Sbjct: 264 EALENCLRGRLDLQHNTVKLGGLIDVMDRIWAAD-RIIICACGTSWHAGLVGEYLIEEFA 322

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
               P    +A+E       ++  +D++I +S SG + +  A +  A+R  +  + I + 
Sbjct: 323 R--IPVEVEYASE-FRYRNPVLRPNDVVIAISQSGETADTLAAVREAKRQGVLTLGICNV 379

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
             S +A   D  + L   PE    G+A T +   Q+A+   LA+ L E R  SE +  
Sbjct: 380 VGSTIARETDAGVYLHVGPE---IGVASTKAFTAQVAVLTMLALKLAEGRTLSEAEMA 434


>gi|210620758|ref|ZP_03292228.1| hypothetical protein CLOHIR_00171 [Clostridium hiranonis DSM 13275]
 gi|210155186|gb|EEA86192.1| hypothetical protein CLOHIR_00171 [Clostridium hiranonis DSM 13275]
          Length = 499

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 66/177 (37%), Gaps = 12/177 (6%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASD 222
           E ES      P TSAIMQ    D +AIAL +     F      +      +  +    + 
Sbjct: 44  EEESPISMNIPMTSAIMQAVSDDNMAIALAKEGGISFIYGSQSIEDQAAMVARVKSYKAG 103

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKD 279
            + S  ++        L D + +  +     VA+ D+G    KL GI+   D      + 
Sbjct: 104 FVESDSNLT---PDSTLADILALKEKTGHSTVAITDDGTAHGKLLGIVASRDYR--VSRM 158

Query: 280 LNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                V + M          +D  L  A  ++  + ++ L VVDD  K + IV   D
Sbjct: 159 ELDTKVSEFMTPLDQIVSAPKDVTLKEANNIIWDNKLNSLPVVDDEGKLVYIVFRKD 215


>gi|16803616|ref|NP_465101.1| hypothetical protein lmo1576 [Listeria monocytogenes EGD-e]
 gi|224501484|ref|ZP_03669791.1| hypothetical protein LmonFR_03037 [Listeria monocytogenes FSL
           R2-561]
 gi|16411005|emb|CAC99654.1| lmo1576 [Listeria monocytogenes EGD-e]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|17229587|ref|NP_486135.1| two-component sensor histidine kinase [Nostoc sp. PCC 7120]
 gi|17131186|dbj|BAB73794.1| two-component sensor histidine kinase [Nostoc sp. PCC 7120]
          Length = 1654

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIK 291
               P+ +AI  + + +  CV V+ + + L+GI+T+ D+ R          L+V ++M +
Sbjct: 21  PPNTPVAEAIAQMYQAQTSCVLVIAKDE-LRGILTQTDVLRGIANRMTFADLTVGELMSQ 79

Query: 292 NPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               + E  L  L   +Q   QH I  L V+DD    + +V  
Sbjct: 80  PVVTVHEAELEDLPNILQRFHQHQIRHLPVLDDQGGVLCVVTL 122


>gi|47096789|ref|ZP_00234371.1| CBS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|254831977|ref|ZP_05236632.1| hypothetical protein Lmon1_11510 [Listeria monocytogenes 10403S]
 gi|254898257|ref|ZP_05258181.1| hypothetical protein LmonJ_00540 [Listeria monocytogenes J0161]
 gi|254912250|ref|ZP_05262262.1| CBS domain-containing protein domain-containing protein [Listeria
           monocytogenes J2818]
 gi|254936577|ref|ZP_05268274.1| CBS domain-containing protein [Listeria monocytogenes F6900]
 gi|47014822|gb|EAL05773.1| CBS domain protein [Listeria monocytogenes str. 1/2a F6854]
 gi|258609173|gb|EEW21781.1| CBS domain-containing protein [Listeria monocytogenes F6900]
 gi|293590227|gb|EFF98561.1| CBS domain-containing protein domain-containing protein [Listeria
           monocytogenes J2818]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|290894455|ref|ZP_06557414.1| CBS domain-containing protein [Listeria monocytogenes FSL J2-071]
 gi|290555993|gb|EFD89548.1| CBS domain-containing protein [Listeria monocytogenes FSL J2-071]
          Length = 437

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|224543509|ref|ZP_03684048.1| hypothetical protein CATMIT_02718 [Catenibacterium mitsuokai DSM
           15897]
 gi|224523636|gb|EEF92741.1| hypothetical protein CATMIT_02718 [Catenibacterium mitsuokai DSM
           15897]
          Length = 277

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 61/144 (42%), Gaps = 3/144 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
               V+ ++  K  V + G+G S  +       L   G  + F          +  +T +
Sbjct: 116 LEDVVKALEQAK-HVYLFGVGGSAIVCDDFIHKLMRIGKYACFYPDVHLQMTSVPNMTEE 174

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL I +S+SG +  +     +A+  +IP +AIT    + +    D VLT+P + +S   G
Sbjct: 175 DLAIFVSYSGETKGIVTAAKWAKEMNIPSVAITQSAYNKLGKLVDHVLTIPSQEQSLRIG 234

Query: 173 LAPTTSAIMQLAIGDALAIALLES 196
               +S    L + D L   L++ 
Sbjct: 235 A--MSSRYSSLIVVDLLYYGLVKR 256


>gi|157362970|ref|YP_001469737.1| RpiR family transcriptional regulator [Thermotoga lettingae TMO]
 gi|157313574|gb|ABV32673.1| transcriptional regulator, RpiR family [Thermotoga lettingae TMO]
          Length = 276

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/142 (21%), Positives = 52/142 (36%), Gaps = 2/142 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + +      L+      + CA EKI   + R+ + G+G SG             G    
Sbjct: 98  IKAIEETSKLLKLNEKVVYQCA-EKISNCR-RLYLLGVGASGVTALDAYYKFMRIGVDVK 155

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           ++         L      D ++  S SGS+  +  +   A++    +IA+T  NKS +  
Sbjct: 156 YMLDPHFQAMSLSGCNEKDCVVAFSQSGSTAVVVDMAQIAKQNKACVIAVTGYNKSPLTF 215

Query: 155 HADIVLTLPKEPESCPHGLAPT 176
           +AD VL           G   +
Sbjct: 216 YADFVLLTAVRENPFQSGAIRS 237


>gi|27379749|ref|NP_771278.1| hypothetical protein blr4638 [Bradyrhizobium japonicum USDA 110]
 gi|27352902|dbj|BAC49903.1| blr4638 [Bradyrhizobium japonicum USDA 110]
          Length = 240

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           V     + +A  I+       + V+D+   L GI++E D                     
Sbjct: 14  VTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLRRSEIGTGRKHAAWLKFFM 73

Query: 273 --FRNFHKDLNT--LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
              R   + ++     VEDVM +      E+T L   + L+ +H+I  + V+   +  IG
Sbjct: 74  GPRRAAAEFVHESGRKVEDVMTRQVVSAREETSLVDVVDLMEKHDIKRVPVM-RGEATIG 132

Query: 329 IVHFLDLLRF 338
           IV   +LL+ 
Sbjct: 133 IVTRSNLLQA 142



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              VM ++   +   T +  A +++ + +IS L V+DD    +GIV   D LR
Sbjct: 3   ALHVMTRDVVAVTPHTTIEEAAKIMLRMHISGLPVIDDAGNLVGIVSESDFLR 55


>gi|322832712|ref|YP_004212739.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321167913|gb|ADW73612.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 289

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 63/167 (37%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+           + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLDQVKNTLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVVYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        +  D+++++S +G +  L  +   AR     +IAITS   + +A  A
Sbjct: 161 DDIVMQRMSCMNSSEGDVVVLISHTGRTKNLVELAQLARENDATVIAITSF-NTPLAHEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 220 TLALLLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|212720944|ref|NP_001131636.1| hypothetical protein LOC100192993 [Zea mays]
 gi|194692108|gb|ACF80138.1| unknown [Zea mays]
          Length = 187

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 22/100 (22%), Positives = 44/100 (44%), Gaps = 3/100 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + DA    + +  G + VVD+  +  G+I+  D  +    +    +V +VM      +  
Sbjct: 82  VDDAFFA-ARQYSGLLPVVDDDGRCVGVISNKD--KAKAPNGMESTVAEVMTSPAITLTL 138

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +  A  L+ +  +  + VV++ Q  IGIV   D+ + 
Sbjct: 139 YKTVLEAAALMLKEKVHRIPVVNEQQHVIGIVTRSDVFQA 178


>gi|167755308|ref|ZP_02427435.1| hypothetical protein CLORAM_00821 [Clostridium ramosum DSM 1402]
 gi|167704247|gb|EDS18826.1| hypothetical protein CLORAM_00821 [Clostridium ramosum DSM 1402]
          Length = 288

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/201 (19%), Positives = 73/201 (36%), Gaps = 9/201 (4%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKA 62
           Y     S T       K  T+     SI    K  ++   +++  ++  +       I  
Sbjct: 75  YTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDNDILAKI-----IIML 129

Query: 63  IKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
            + +V+ I G+     I S     +   G                    +D   I++S+S
Sbjct: 130 DQTKVIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNKDHCAILISYS 189

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G ++E+ A     +R  +P+IAITS  +S ++   D VL L              +  I 
Sbjct: 190 GETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSKVSTFGS-TIS 248

Query: 182 QLAIGDALAIALLESRNFSEN 202
              + D +   L  +R++ EN
Sbjct: 249 IHIMLDIIYSCLF-ARHYDEN 268


>gi|15806013|ref|NP_294714.1| acetoin utilization protein [Deinococcus radiodurans R1]
 gi|6458717|gb|AAF10565.1|AE001951_5 acetoin utilization protein, putative [Deinococcus radiodurans R1]
          Length = 209

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              +   V    P++DA+ ++SE+R      V    KL GI T  D+             
Sbjct: 7   MTRTPVTVTPDTPVMDALKLISERRV-RRLPVLRDGKLVGITTRKDLKDAMPSKATTLSV 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L+ L+VE++M +      ED  +  A   +++H    L V++   +   I+   
Sbjct: 66  WELNYLLSKLTVEEIMGRPVITAQEDEYMEDAALRMQEHKFGGLPVLNAQGQMSDIITTS 125

Query: 334 DLLRF 338
           D++R 
Sbjct: 126 DVIRA 130



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D M + P  +  DT +  A++L+ +  +  L  V    K +GI    DL
Sbjct: 3   VSDWMTRTPVTVTPDTPVMDALKLISERRVRRLP-VLRDGKLVGITTRKDL 52



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/38 (31%), Positives = 21/38 (55%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + DA   + E +FG + V++   ++  IIT  D+ R F
Sbjct: 94  MEDAALRMQEHKFGGLPVLNAQGQMSDIITTSDVIRAF 131


>gi|321312509|ref|YP_004204796.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis BSn5]
 gi|320018783|gb|ADV93769.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis BSn5]
          Length = 214

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTL----SVED 287
              L  AI  L E     + VVDE + + G+IT+ D+ +     F ++  +L    SV+ 
Sbjct: 17  TDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDS 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+         +     +  +H I  L VV   QK IGI+   DLLR
Sbjct: 77  IMKKDVICAHPLDFVEEISAVFYEHGIGCLPVV-HHQKLIGILTKTDLLR 125



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE +M ++   + +   L  A+  L++ +I  L VVD+ +  IG++   D+ + 
Sbjct: 3   VEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQA 56


>gi|262039230|ref|ZP_06012548.1| transcription regulator [Leptotrichia goodfellowii F0264]
 gi|261746724|gb|EEY34245.1| transcription regulator [Leptotrichia goodfellowii F0264]
          Length = 275

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 6/154 (3%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            +++ +S +  +       ++  I   + R+ + G+G SG +  +L +     G      
Sbjct: 101 AITNTKSLIDRK---HLDKSIAAIGKAE-RLFLYGVGASGIVARELQNKFLRFGKAGIAY 156

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +     +  + T  D+II +S SGS++++   L  A++    +IAIT+   S VA  A
Sbjct: 157 TDSHFQIMNAAITTNKDVIIAVSLSGSTNDIVESLEIAKKNKAKIIAITNHILSPVAQLA 216

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           D VL           G     + I QL + D L 
Sbjct: 217 DYVLLTAGRETLLDGGSL--IAKISQLYVADILC 248


>gi|260575234|ref|ZP_05843234.1| putative signal transduction protein with CBS domains [Rhodobacter
           sp. SW2]
 gi|259022494|gb|EEW25790.1| putative signal transduction protein with CBS domains [Rhodobacter
           sp. SW2]
          Length = 144

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
              D +  V  G  +   + +L++KR G + V  +G  + GI++E D+ R   +    + 
Sbjct: 10  KHDDQVATVPPGTTMAQVVGLLADKRIGALVVSSDGVAVAGIVSERDVVRELARRGPGVL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + VE +M                ++ + +     + V+ +  + +G++   DL++  +
Sbjct: 70  RMPVESLMTTRVVGCGLQDRANDVLEQMTRGRFRHMPVL-EGGRMVGLISIGDLVKARL 127


>gi|169832143|ref|YP_001718125.1| cyclic nucleotide-binding protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638987|gb|ACA60493.1| cyclic nucleotide-binding protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 641

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/195 (18%), Positives = 60/195 (30%), Gaps = 11/195 (5%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             SV A      L +P+E         P  S      +   +     E       DF   
Sbjct: 94  PGSVRARKDLTCLVMPREVFERLMYHHPEVSRFFSRVLLSRMRSLYQEIVADQAPDFVR- 152

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                  +              +   +   P+     I+ EK  G V VVD+     G++
Sbjct: 153 -----AESALFRRRAAEIMSTPVVTCRRSEPVHHVAQIMVEKNIGSVVVVDQTGHPVGLV 207

Query: 268 TEGDIFRNFH----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           TE D+              L+ E VM +    +     L   +  + +H    L V ++ 
Sbjct: 208 TERDLVARLADPAQGWPAHLTAEAVMQRKLVQVPAGAYLYEVLVQVIKHGCKHLTVTENE 267

Query: 324 QKAIGIVHFLDLLRF 338
              +GI+   DL R 
Sbjct: 268 -FLVGIISVADLARA 281


>gi|156974914|ref|YP_001445821.1| DNA-binding transcriptional regulator HexR [Vibrio harveyi ATCC
           BAA-1116]
 gi|156526508|gb|ABU71594.1| hypothetical protein VIBHAR_02633 [Vibrio harveyi ATCC BAA-1116]
          Length = 284

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCSDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +TL    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LAITLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|116317809|emb|CAH65846.1| OSIGBa0147B06.5 [Oryza sativa Indica Group]
          Length = 224

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 18/86 (20%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V+DE  +  G++++ D  +    +    +V +VM      +  +  +  A  L+ + 
Sbjct: 135 GLPVLDEEGRCIGVVSKKD--KAKASNGLDSTVGEVMSSPAITLTPEKTVLEAAALMLKE 192

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  + VV++ Q+ IGIV   D+ + 
Sbjct: 193 KVHRIPVVNEQQQVIGIVTRTDVFKA 218



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 25/44 (56%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +++A  ++ +++   + VV+E Q++ GI+T  D+F+    
Sbjct: 178 PEKTVLEAAALMLKEKVHRIPVVNEQQQVIGIVTRTDVFKALEA 221



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 9/80 (11%)

Query: 266 IITEGDIFRNFHKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +++  D+       +        T  + +VM +  +V + D  L            S L 
Sbjct: 80  LLSYADLRAYLESQIVTTDQMSPTAKLGEVMSRPVQVAMADQRLADIDAFFGAQ--SGLP 137

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D+  + IG+V   D  + 
Sbjct: 138 VLDEEGRCIGVVSKKDKAKA 157


>gi|251792322|ref|YP_003007047.1| N-acetylmannosamine kinase [Aggregatibacter aphrophilus NJ8700]
 gi|247533714|gb|ACS96960.1| N-acetylmannosamine kinase [Aggregatibacter aphrophilus NJ8700]
          Length = 289

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 61/156 (39%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           +E ++      Q    VE I+    +V + G+G SG       +     G          
Sbjct: 115 MEETINLLDFSQLEKVVEAIQHA-NKVFLFGVGSSGVTAEDAKNKFMRIGMQVDASGNNH 173

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++ ++D+ I +S SG S E    L  A++     +A+T   +S +  HAD VL
Sbjct: 174 FMYMQAALLKKNDVAIGISHSGYSQETAHTLKIAKQNGAVTVALTHSLRSPITEHADFVL 233

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +            + I QL + D +   L+++
Sbjct: 234 VNGNKQGKLQGDSI--GTKIAQLFVLDLIYALLVQA 267


>gi|160931902|ref|ZP_02079295.1| hypothetical protein CLOLEP_00734 [Clostridium leptum DSM 753]
 gi|156869239|gb|EDO62611.1| hypothetical protein CLOLEP_00734 [Clostridium leptum DSM 753]
          Length = 290

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 62/176 (35%), Gaps = 6/176 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +    E++ L      L  +    F  AV  I A   +V     G +  I       L  
Sbjct: 108 KVFAGEQQALQETLQMLNRQ---DFISAVNHI-AFSNKVEFFSCGNARPIAQDAHYRLLR 163

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           TG  S              M+   D+ I +S SGS+     +L  A++     I IT   
Sbjct: 164 TGIDSRIGIDDYDCLIHASMLRTGDVAIGISHSGSTKNTIKMLEEAKKNGATTICITGME 223

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           K+ +   +DI +      +          S I Q+AI DAL +A+   R      +
Sbjct: 224 KAPITRVSDICMVSH--SKETMFRSMAMASRIAQMAIIDALVVAVSFKRFERSKQY 277


>gi|15678838|ref|NP_275955.1| sporulation protein IVFB related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2621907|gb|AAB85316.1| sporulation protein IVFB related protein [Methanothermobacter
           thermautotrophicus str. Delta H]
          Length = 341

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 6/129 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               + +L           ++   +     + +A+ ++  ++     V  E  +L+GI+T
Sbjct: 209 QATLISSLLEGVRVADVMTENPVTLHPHMTVKEALDVMFREKHMGYPVT-EAGELRGIVT 267

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI          L VEDVM  +   + +D  +T A++ + +  +  L V+    K  G
Sbjct: 268 FHDISDA----SRDLRVEDVMTGDVVTVRDDEEVTGALEKMNRLQLGRLPVM-RDGKLTG 322

Query: 329 IVHFLDLLR 337
           I+   D++R
Sbjct: 323 IISRTDIVR 331


>gi|33152451|ref|NP_873804.1| putative transcriptional regulator [Haemophilus ducreyi 35000HP]
 gi|33148674|gb|AAP96193.1| putative transcriptional regulator [Haemophilus ducreyi 35000HP]
          Length = 292

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 2/172 (1%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A    +  +  L+++ +     L F+    V        R+ + G+G SG        
Sbjct: 97  DSAKEIAVKLQSSLNNVIAETINLLDFKELENVVAELQKAQRIFLFGVGSSGLTAEDAKH 156

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G  +  V      +    ++ + D++I +S SG S E+ + L  AR      IAI
Sbjct: 157 KLMRIGLQTDAVTNNHFMYMQASLLCQGDVVIGISHSGHSQEVISALGIARNNHAKTIAI 216

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           T   +S +   AD VL                 + + QL + D + + L+++
Sbjct: 217 THYIRSPITNVADYVLINGNRQG--HMQGDSIGTKMSQLFVLDLIYVLLVKA 266


>gi|37526037|ref|NP_929381.1| DNA-binding transcriptional regulator HexR [Photorhabdus
           luminescens subsp. laumondii TTO1]
 gi|36785467|emb|CAE14414.1| Hex regulon repressor [Photorhabdus luminescens subsp. laumondii
           TTO1]
          Length = 286

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 62/169 (36%), Gaps = 5/169 (2%)

Query: 36  RGLSSLESSLQGELSF-QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
             + +   +++  L     + AV+ +   + ++   G+G S  +     +       P  
Sbjct: 100 ESVMATLDTVKNNLDITAINRAVDLLTQAR-KISFFGLGASAAVAHDAMNKFFRFNIPVI 158

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +                 D+++++S +G +  L      AR     +IAITS   S +A 
Sbjct: 159 YFDDIVMQRMSCINSAEGDVVVLISHTGRTKSLVEAAQLARENDATVIAITS-QDSPLAH 217

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            A + + L    ++  +   P  S I QL + D LA      R     D
Sbjct: 218 EATLAILLDVPEDTDIY--MPMVSRIAQLTVIDVLATGFTLRRGSKFRD 264


>gi|257898950|ref|ZP_05678603.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com15]
 gi|293571022|ref|ZP_06682065.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E980]
 gi|257836862|gb|EEV61936.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com15]
 gi|291608948|gb|EFF38227.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E980]
          Length = 282

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE +++ +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLESAES-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKNMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSLLAQFATIDII 252


>gi|157147977|ref|YP_001455296.1| DNA-binding transcriptional repressor RpiR [Citrobacter koseri ATCC
           BAA-895]
 gi|157085182|gb|ABV14860.1| hypothetical protein CKO_03784 [Citrobacter koseri ATCC BAA-895]
          Length = 296

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       K R  + G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQAKQR-DLYGAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQTYPDAHIMMMSASLLKEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|21243772|ref|NP_643354.1| hypothetical protein XAC3045 [Xanthomonas axonopodis pv. citri str.
           306]
 gi|21109361|gb|AAM37890.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
           str. 306]
          Length = 142

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
            +++EK  G V V+ EG +L GI++E D  R      +  +T SV  +M      +    
Sbjct: 29  RLMAEKAIGAVLVM-EGPRLVGIVSERDYARKVVLRDRSSSTTSVAQIMSGEVVTVSPSE 87

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 88  TVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 124



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D+                S        +  V     +   + ++++ RF  + VV E
Sbjct: 52  SERDYA--RKVVLRDRSSSTTSVAQIMSGEVVTVSPSETVERCMQLMTDGRFRHLPVV-E 108

Query: 260 GQKLKGIITEGDIFRNF 276
             +++G+I+ GD+ +  
Sbjct: 109 NGRVQGVISIGDLVKAV 125


>gi|329906757|ref|ZP_08274507.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
 gi|327547159|gb|EGF32022.1| Inosine-5'-monophosphate dehydrogenase [Oxalobacteraceae bacterium
           IMCC9480]
          Length = 486

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 68/169 (40%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+      
Sbjct: 40  NIPLLSAAMDTVTESRLAIAMAQEGGIGIIHKNLTPREQAREVSRVKRFESGVVR---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D I++ ++       VV EG+ + GIIT  D+   F ++L    V   M 
Sbjct: 97  ITIPPNMKIRDVISLSAQHGISGFPVV-EGKMVIGIITNRDLR--FEEEL-DAEVRAKMT 152

Query: 291 --KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +    + +   L+ A +L+ +H +  ++VV+D  +  G++   D+ +
Sbjct: 153 VREKLVFVKDGAELSEAKRLMNKHRLERVLVVNDDFELRGLITVKDIQK 201



 Score = 40.7 bits (94), Expect = 0.38,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               M   + +  VK G  L +A  ++++ R   V VV++  +L+G+IT  DI ++    
Sbjct: 147 VRAKMTVREKLVFVKDGAELSEAKRLMNKHRLERVLVVNDDFELRGLITVKDIQKSTEHP 206

Query: 280 LNTLSV 285
                V
Sbjct: 207 FACKDV 212


>gi|315424919|dbj|BAJ46595.1| inosine-5'-monophosphate dehydrogenase [Candidatus Caldiarchaeum
           subterraneum]
          Length = 440

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/167 (16%), Positives = 58/167 (34%), Gaps = 9/167 (5%)

Query: 175 PTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV 233
           P  SA M       +A+A+         + F  +    ++  + +       + +    +
Sbjct: 2   PIVSAAMDTVTEAEMAVAMAREGGIGVIHRFNTVEQ--QVEQVKLVKRAENIAVEEPYTI 59

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN- 292
           +    + +A  ++  K    + V    +KL GI++  DI            V + M    
Sbjct: 60  EPEATVAEAEALMRRKNVSGLLVTKSSRKLVGILSRRDILFA----PREAKVSEYMTPRE 115

Query: 293 -PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     L  A Q+  +H +  L +VD      G++   D+++ 
Sbjct: 116 KLITAPPSISLEEAKQIFMKHKVEKLPLVDSEWNIKGLITSADIVKK 162


>gi|302037751|ref|YP_003798073.1| hypothetical protein NIDE2438 [Candidatus Nitrospira defluvii]
 gi|300605815|emb|CBK42148.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 127

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 5/122 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-- 276
             +        +  V  G    DA  +++E+  G V + ++  ++ GI+TE DI R    
Sbjct: 1   MVTVSELMTKKLVTVPAGTSAADAARVMNERHVGSVFI-EQNDRVVGIVTESDIVRKVVG 59

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++ ++ + VE +M      + E   +T A  L++ H+   L V+      +G++   DL
Sbjct: 60  ENRPVHFVPVESIMSSPVISLDERRSITEAADLMQHHHTRHLGVL-KSGAIVGVLSVRDL 118

Query: 336 LR 337
           L+
Sbjct: 119 LQ 120


>gi|257095774|ref|YP_003169415.1| CBS domain containing membrane protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
 gi|257048298|gb|ACV37486.1| CBS domain containing membrane protein [Candidatus Accumulibacter
           phosphatis clade IIA str. UW-1]
          Length = 203

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 48/124 (38%), Gaps = 6/124 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
                    I  V     +  A  IL E+R     V+D   +L GI++E D+    +   
Sbjct: 69  HAYQIMQRQIVSVTSTDAVERAWRILLERRIHQAPVLDPTYRLVGIVSERDLLTVLNVEE 128

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +D     V DVM          T +     ++ +H +  + +V+D Q  +G V   D
Sbjct: 129 GRVRDALARQVSDVMTTPVVSADPITDIRRIAWVMLEHQVDGVPIVNDTQALVGFVSRSD 188

Query: 335 LLRF 338
           +LR 
Sbjct: 189 ILRA 192



 Score = 36.0 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 13/68 (19%), Positives = 27/68 (39%), Gaps = 2/68 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIG--CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           G +    +  +    + P+V       +     ++ E +   V +V++ Q L G ++  D
Sbjct: 129 GRVRDALARQVSDVMTTPVVSADPITDIRRIAWVMLEHQVDGVPIVNDTQALVGFVSRSD 188

Query: 272 IFRNFHKD 279
           I R    D
Sbjct: 189 ILRAIITD 196


>gi|318081838|ref|ZP_07989147.1| transcriptional regulator [Streptomyces sp. SA3_actF]
          Length = 267

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/163 (20%), Positives = 61/163 (37%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   ++L          AV  +   + R+ I G+G S  +   L   L   G  +
Sbjct: 89  ERQTLADTAANLDT---AALGAAVTALAQAR-RIDIYGVGASHLVAQDLGQKLLRIGLFA 144

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +   +   D+ + ++ SGS+ ++   L  A       IAIT       A
Sbjct: 145 QAHADPHLAITNAVQLRGKDVAVAITHSGSTSDVVEPLRAAFERGATTIAITGRPDGSAA 204

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD VLT            A  +S   Q  + D L + + + 
Sbjct: 205 QYADHVLTT-VAARESELRPAAMSSRASQHLVVDCLFVGVAQR 246


>gi|302340433|ref|YP_003805639.1| CBS domain containing protein [Spirochaeta smaragdinae DSM 11293]
 gi|301637618|gb|ADK83045.1| CBS domain containing protein [Spirochaeta smaragdinae DSM 11293]
          Length = 451

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    L++A  +L +     + V+ E   L G IT  DI +    +     V
Sbjct: 320 MSSPVHTIRDTASLLEASILLEKLGHTGIPVICETGALAGFITLRDIMKGRRAEQMHSPV 379

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  M +N      +T +    + L  +NI  L ++ +     GIV   D L
Sbjct: 380 KGYMTRNLITAAPETTVREIEEKLFDNNIGHLPIIREGN-LAGIVTRTDFL 429



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 14/87 (16%), Positives = 32/87 (36%), Gaps = 5/87 (5%)

Query: 252 GCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           G   V  E  +         +  +  + L   ++ E++M      I +   L  A  LL 
Sbjct: 286 GSALVKHEDGR----FVHKKLLEHLEEMLAPAITAEELMSSPVHTIRDTASLLEASILLE 341

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   + + V+ +     G +   D+++
Sbjct: 342 KLGHTGIPVICETGALAGFITLRDIMK 368


>gi|300784312|ref|YP_003764603.1| signal transduction protein [Amycolatopsis mediterranei U32]
 gi|299793826|gb|ADJ44201.1| signal transduction protein [Amycolatopsis mediterranei U32]
          Length = 143

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G ++  V     +   +  L++   G + VV     + GI++E D+ R  ++    
Sbjct: 7   LRKKGSAVATVTPETTVTALLAGLADHNVGAMVVVAPDGSIAGIVSERDVVRRLNEHGPA 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V ++M K       D  +     L+ +  I  + V+    +  GIV   D+++
Sbjct: 67  LLDGPVSEIMTKLVASCSPDDSVDQLSVLMTERRIRHVPVL-ADGRLAGIVSIGDVVK 123


>gi|330683989|gb|EGG95749.1| 6-phospho 3-hexuloisomerase [Staphylococcus epidermidis VCU121]
          Length = 182

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 41/176 (23%), Positives = 71/176 (40%), Gaps = 12/176 (6%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L S  S L+  +  +F   V +       V + G G+SG I +  A  L   G  S+ 
Sbjct: 12  EELESTFSQLENNVYQEFGQIVTQAPQ----VFVAGKGRSGFIANSFAMRLNQLGKVSYV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V            I+ +DL I++S SGS++ L+ +   A      +  IT+++ + +   
Sbjct: 68  VGETTTP-----SISSNDLFIIISGSGSTEHLRILAEKADSIGTTIALITTKSNTKIGQL 122

Query: 156 ADIVLTLPKEPESCPHG-LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           AD+ + LP   +    G   P  S   Q      D++ + L+   +  E      H
Sbjct: 123 ADLTVVLPAGTKHDAEGSKQPLGSLFEQSSLIFLDSVVLGLMSKDDIDETTMQQNH 178


>gi|297526422|ref|YP_003668446.1| 6-phospho 3-hexuloisomerase [Staphylothermus hellenicus DSM 12710]
 gi|297255338|gb|ADI31547.1| 6-phospho 3-hexuloisomerase [Staphylothermus hellenicus DSM 12710]
          Length = 206

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/188 (18%), Positives = 70/188 (37%), Gaps = 24/188 (12%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + ++ +    + +++ +   A         R+++ G G+SG +G   A  L   G   + 
Sbjct: 23  KAINVISEEEKNKMTEELVDA----YRRGARILVMGAGRSGLVGKAFAMRLLHIGFQVYV 78

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           +            I   DL++ +S SG +  +      A+     +IAIT+   S +   
Sbjct: 79  LGETIVP-----RIREGDLVVAISGSGRTRLIVTAAEAAKMVGAKVIAITTYPDSPLGKI 133

Query: 156 ADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFS 200
           ADI++ +P   +                  LAP  +      +   D + + L++    +
Sbjct: 134 ADIIVRVPGRTKIAKEEDYFTRQILGIHEPLAPLGTLFEDTTMVFLDGIVVELMKKLGKT 193

Query: 201 ENDFYVLH 208
           E D    H
Sbjct: 194 EEDLKNEH 201


>gi|126179930|ref|YP_001047895.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125862724|gb|ABN57913.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 262

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     + D I  + +       VV+  +++ G I+  D+         +  
Sbjct: 9   YMTYDVVTVNAHGTVRDVIETIKKTHHDGFPVVENSKEVVGYISARDLLFA----HPSTP 64

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E +M ++  V   D  +  A +++ +  I  L VV+D  + IGI+   D++R
Sbjct: 65  IEQMMSRHLIVADPDMSVNDAARVIFRSGIQKLPVVNDKNELIGIMSNADVIR 117



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 27/57 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++   V+D M  +   +     +   ++ +++ +     VV++ ++ +G +   DLL
Sbjct: 1   MDKKKVKDYMTYDVVTVNAHGTVRDVIETIKKTHHDGFPVVENSKEVVGYISARDLL 57



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 9/51 (17%), Positives = 21/51 (41%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                 + +      + DA  ++       + VV++  +L GI++  D+ R
Sbjct: 67  QMMSRHLIVADPDMSVNDAARVIFRSGIQKLPVVNDKNELIGIMSNADVIR 117


>gi|70732264|ref|YP_262020.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           Pf-5]
 gi|68346563|gb|AAY94169.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           Pf-5]
          Length = 489

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKRFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D + + S      V V+     L GI+T  D+     +    +SV +V
Sbjct: 96  DPITIEADATVRDLLELTSMHNISGVPVL-HNGDLVGIVTSRDVRF---ESRLEVSVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E    T   +LL +H I  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVKEGADKTAVRELLHKHRIERVLIVDDAFALKGMMTVNDIEKAK 204


>gi|125973199|ref|YP_001037109.1| inosine 5-monophosphate dehydrogenase [Clostridium thermocellum
           ATCC 27405]
 gi|281417398|ref|ZP_06248418.1| IMP dehydrogenase [Clostridium thermocellum JW20]
 gi|125713424|gb|ABN51916.1| IMP dehydrogenase/GMP reductase [Clostridium thermocellum ATCC
           27405]
 gi|281408800|gb|EFB39058.1| IMP dehydrogenase [Clostridium thermocellum JW20]
 gi|316940570|gb|ADU74604.1| IMP dehydrogenase [Clostridium thermocellum DSM 1313]
          Length = 497

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ    D LAIAL      S    Y   P      +                
Sbjct: 51  NIPIVSAIMQSVSNDTLAIALARCGGLSF--IYASQPIESQAEMVKRVKKYKSGFVVSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            + I   L D I + +      +A+ D+G    KL G++T  D      +D     V+D 
Sbjct: 109 NLTIDSTLKDVIELKNRTGHSTIAITDDGTASGKLLGLVTTRDYR--ISRDPLDKKVKDF 166

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           M       V      L+ A  ++ ++ ++ L +VDD Q+ 
Sbjct: 167 MTPFSKLVVGKLGISLSEANDIIWENKLNCLPIVDDEQRL 206


>gi|293377580|ref|ZP_06623770.1| SIS domain protein [Enterococcus faecium PC4.1]
 gi|292643795|gb|EFF61915.1| SIS domain protein [Enterococcus faecium PC4.1]
          Length = 244

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 33/165 (20%), Positives = 67/165 (40%), Gaps = 5/165 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            +I  E+  ++ +       +  Q   A E +K     +   G+G SG + S  A    +
Sbjct: 81  DTISLEQIFVNQV---FAENVFEQVANASELLKKS-NFIYCVGMGSSGIMASYAARKFNT 136

Query: 89  TGTPSFFVHAAEASHGDLGMI-TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
            G  +   +   A      M  T +++II+ S SG + E+  I+   R  +  +I+IT+ 
Sbjct: 137 IGLKAMHSNEPYAPFLSTQMKETNNNVIIIFSSSGETAEIIEIVQILRSSNNKIISITNT 196

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIA 192
           + + +A  + I +    E +  P+    ++       I    A+ 
Sbjct: 197 HDNTLARLSTINIPYFIENQRLPYNFDLSSQIPTVALIEYLAAVC 241


>gi|73662371|ref|YP_301152.1| hypothetical protein SSP1062 [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
 gi|72494886|dbj|BAE18207.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
           saprophyticus ATCC 15305]
          Length = 430

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 52/129 (40%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++ +     +V     L D  T   E       V+DE  +L GI+T 
Sbjct: 180 NQMIRKEILVVEDIVKTVTEDMVVFDNMSLSDYKTKARETGHSRFPVIDENWRLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I +  ++D    ++   M K+P  +   T +     ++    I +L V    +K IG+
Sbjct: 240 KEIIKMENQD----TLAQFMTKSPINVQLSTTVANCAHMMIWEGIELLPVTTPSKKLIGV 295

Query: 330 VHFLDLLRF 338
           +   D+L  
Sbjct: 296 ITRKDVLTA 304


>gi|289676088|ref|ZP_06496978.1| KpsF/GutQ [Pseudomonas syringae pv. syringae FF5]
          Length = 51

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 27/48 (56%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           K    + L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 4   KTAHAEMLAAEALKVMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 51


>gi|237734199|ref|ZP_04564680.1| sugar isomerase [Mollicutes bacterium D7]
 gi|229382759|gb|EEO32850.1| sugar isomerase [Coprobacillus sp. D7]
          Length = 312

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 71/200 (35%), Gaps = 7/200 (3%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKA 62
           Y     S T       K  T+     SI    K  ++   +++  ++       +  +  
Sbjct: 75  YTFDRNSETNPNFPFKKRDTIHTIKHSIATLAKDSINLTVNNIDNDI---LAKIIIMLDQ 131

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            K  + I G+     I S     +   G                    +D   I++S+SG
Sbjct: 132 AK-VIDIYGVSGPLRIASDFQYKMFRIGKNVQIAPMVNEQLFQAAQSNKDHCAILISYSG 190

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            ++E+ A     +R  +P+IAITS  +S ++   D VL L              +  I  
Sbjct: 191 ETNEVIAAAELLKRRKVPMIAITSFGESRLSKLCDYVLFLDSRERIYSKVSTFGS-TISI 249

Query: 183 LAIGDALAIALLESRNFSEN 202
             + D +   L  +R++ EN
Sbjct: 250 HIMLDIIYSCLF-ARHYDEN 268


>gi|220904801|ref|YP_002480113.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
 gi|219869100|gb|ACL49435.1| CBS domain containing membrane protein [Desulfovibrio desulfuricans
           subsp. desulfuricans str. ATCC 27774]
          Length = 223

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 14/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               +  V     L+    +L + R   + VVD    + G+I   D+ + F         
Sbjct: 7   MKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADL-KAFAPQHTTGFE 65

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L    V+DVM+  P  I  +  +  A + +   +++ L V+DD  K +GI+  
Sbjct: 66  ILEALDILAETKVKDVMVVAPVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITG 125

Query: 333 LDLLRF 338
            D+   
Sbjct: 126 WDIFHA 131



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + D M  +   ++ DT L    +LL+ + I+ L VVD     +G++   DL
Sbjct: 3   ILDWMKPHVITVVPDTSLLQCRKLLKDNRINYLPVVDRDNIVVGLIASADL 53



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 21/47 (44%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +     +  A   + ++   C+ V+D+  KL GIIT  DIF   
Sbjct: 86  PVTIHYNNTVEQAAKTMFDRHVACLPVIDDEDKLVGIITGWDIFHAL 132


>gi|84515564|ref|ZP_01002926.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
 gi|84510847|gb|EAQ07302.1| Protein containing a CBS domain [Loktanella vestfoldensis SKA53]
          Length = 144

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           VK    + DA+T+LS+ R G V V  +G  L GI++E DI R   K      +  V ++M
Sbjct: 18  VKPTDMVTDAVTLLSQNRIGTVVVSGDGVTLDGILSERDIVRELGKRGVSCLSAPVSEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                         + +Q++ +     L V+D+    IG++   D+++  +
Sbjct: 78  TAKLTTCTTADSADLVLQMMTEGRFRHLPVMDN-GTMIGLISIGDVVKARL 127


>gi|260460727|ref|ZP_05808977.1| putative signal transduction protein with CBS domains
           [Mesorhizobium opportunistum WSM2075]
 gi|259033304|gb|EEW34565.1| putative signal transduction protein with CBS domains
           [Mesorhizobium opportunistum WSM2075]
          Length = 143

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIK 291
               L +AI IL+E + G + + +   K+ GI++E DI R   ++      + V   M  
Sbjct: 19  PNEKLSEAIRILAEHKIGALVITNGDHKIVGILSERDIVRVVAREGGAALDIPVRSAMTP 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             K+  E+  +   M+++ +     L V +      GIV   D+++  I
Sbjct: 79  KVKICNENHTVNEVMEIMTRGRFRHLPV-EKDGLLDGIVSIGDVVKRRI 126



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 25/43 (58%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +  L+ A+++L +H I  L++ +   K +GI+   D++R
Sbjct: 16  TLGPNEKLSEAIRILAEHKIGALVITNGDHKIVGILSERDIVR 58


>gi|90413235|ref|ZP_01221230.1| hypothetical protein P3TCK_16714 [Photobacterium profundum 3TCK]
 gi|90325787|gb|EAS42245.1| hypothetical protein P3TCK_16714 [Photobacterium profundum 3TCK]
          Length = 152

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/132 (20%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--- 274
           +      +    +  ++    L +A  ++ +     + V +   +L G I++ ++ R   
Sbjct: 1   MPTKVSEYMTRKVVTIQPETGLREAFFLMRDNAIRHLPVTNIDGELIGFISDRELRRPGW 60

Query: 275 --------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                   + +   + L V DVM+K+   +     LT A+  +  HNIS   V+D   + 
Sbjct: 61  VDESPDIGHEYDLTDDLHVGDVMVKDIIHVRTYDTLTKAIGTILNHNISAAPVLDKTGQL 120

Query: 327 IGIVHFLDLLRF 338
           +GI+  +DLL  
Sbjct: 121 VGILSAVDLLSA 132



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             V + M +    I  +T L  A  L+R + I  L V +   + IG +   +L R G
Sbjct: 3   TKVSEYMTRKVVTIQPETGLREAFFLMRDNAIRHLPVTNIDGELIGFISDRELRRPG 59


>gi|83643248|ref|YP_431683.1| DNA-binding transcriptional regulator HexR [Hahella chejuensis KCTC
           2396]
 gi|83631291|gb|ABC27258.1| Transcriptional regulator [Hahella chejuensis KCTC 2396]
          Length = 310

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 61/161 (37%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ + Q   +     AV+ +   K ++   G+G S  +             P     
Sbjct: 129 IADLDKARQSLNTTAISKAVDYLIQAK-QISFFGMGASAAVAIDAQHKFFRFNIPVTAYD 187

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D I+ +S++G + E+  +   AR     +I IT+   S +A    
Sbjct: 188 DFLMQRMVAAAAHTGDAIVAISYTGRTREMVEVAKIAREQGAVVIGITA-PDSPLARECT 246

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +    ++  +   P TS I+ LA+ D LA  +   R 
Sbjct: 247 VALDVIAPEDTDVY--MPMTSRIVHLAVIDILATGVTLKRG 285


>gi|28373593|pdb|1M3S|A Chain A, Crystal Structure Of Yckf From Bacillus Subtilis
 gi|28373594|pdb|1M3S|B Chain B, Crystal Structure Of Yckf From Bacillus Subtilis
          Length = 186

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 12/180 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L +S     + +     + I +   ++   G G+SG +    A  L   G  + 
Sbjct: 9   AEILNELHNSAAYISNEEADQLADHILSSH-QIFTAGAGRSGLMAKSFAMRLMHMGFNAH 67

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   DL+I+ S SG +  L      A+     + A+T   +S +  
Sbjct: 68  IVGEILTPP-----LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGK 122

Query: 155 HADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            AD+++ +P  P+   +G    + P  S   Q      DA+ + L+E +       +  H
Sbjct: 123 QADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHH 182


>gi|114566148|ref|YP_753302.1| manganese-dependent inorganic pyrophosphatase [Syntrophomonas
           wolfei subsp. wolfei str. Goettingen]
 gi|114337083|gb|ABI67931.1| Inorganic diphosphatase [Syntrophomonas wolfei subsp. wolfei str.
           Goettingen]
          Length = 450

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 19/175 (10%)

Query: 179 AIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP 238
           A  Q     A+A  + +  +F    F    P   +  +     D++   +    V     
Sbjct: 29  ATDQGLYLAAMAGEMSDEIDFVLEAF-DFAPPLHIKNVKTTVEDLLDEKEPFC-VCRDMN 86

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------------- 282
           L++   +L ++    V VVDE ++L G+IT GD+   F   L                  
Sbjct: 87  LMELSNLLRQQELKTVPVVDEKERLLGLITIGDMAMLFMNSLLDVGDLAETPGILGKLLN 146

Query: 283 LSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V D+M I++  +  +D     A +L+         VVD+  + +GI+    LL
Sbjct: 147 KKVTDIMKIRDLILFEKDEAAEEARKLMLSTRFRNYPVVDEENRFLGIISRYHLL 201


>gi|317471702|ref|ZP_07931043.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
 gi|316900806|gb|EFV22779.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
          Length = 185

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 35/176 (19%), Positives = 64/176 (36%), Gaps = 13/176 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + +   +       + I   K R+ + G G+SG      ++ L   G   +FV 
Sbjct: 11  LNELMENAKEIQNEDVLKVEDLIMNAK-RIFVGGAGRSGFAARGFSNRLMHLGFQVYFVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL+IV S SG++  L +    A+     +  +T   ++ +   AD
Sbjct: 70  EPTTP-----SIQEGDLLIVGSGSGNTASLVSNAKTAKAQGAKVATVTMFPENKIGSMAD 124

Query: 158 IVLTLP-KEPESCPHGL---APTTSAIMQLAIGDALAIALLESRNFSEND---FYV 206
             + +P    +    G      + S+  +L      AI +   R   + D   F  
Sbjct: 125 AAIRIPGVTEKCAGQGKGSVQSSGSSFEELTWITYDAIVMDLMRITKQGDKELFAR 180


>gi|291482743|dbj|BAI83818.1| 6-phospho-3-hexuloisomerase [Bacillus subtilis subsp. natto
           BEST195]
          Length = 185

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 37/180 (20%), Positives = 68/180 (37%), Gaps = 12/180 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L +S     + +     + I +   ++   G G+SG +    A  L   G  + 
Sbjct: 8   AEILNELHNSAAYISNEEADQLADHILSSH-QIFTAGAGRSGLMAKSFAMRLMHMGFNAH 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   DL+I+ S SG +  L      A+     + A+T   +S V  
Sbjct: 67  IVGEILTPP-----LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSVGK 121

Query: 155 HADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            AD+++ +P  P+   +G    + P  S   Q      DA+ + L+E +       +  H
Sbjct: 122 QADLIIRMPGSPKDPSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHH 181


>gi|269120462|ref|YP_003308639.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
 gi|268614340|gb|ACZ08708.1| 6-phospho 3-hexuloisomerase [Sebaldella termitidis ATCC 33386]
          Length = 186

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 72/185 (38%), Gaps = 17/185 (9%)

Query: 35  KRGLSSLESSLQGE----LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
              L ++   L  +             E I     R+ I G G+SG      A+ L   G
Sbjct: 4   AEELLAICRELSEDAEFVSGEDIEKLAELIIKS-NRIFIAGAGRSGFAARAFANRLMHLG 62

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
              FFV            I  +DL+I+ S SG +  L  +   A   +  +  IT   ++
Sbjct: 63  LTVFFVGETTTP-----SIQANDLLIIGSGSGETGSLVTMANKASGQNASVATITIYPQA 117

Query: 151 VVACHADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSEND 203
            +   + + + LP      + +S    + P  S+  QL++   D+L + L++  N + ++
Sbjct: 118 TIGALSKVTVKLPGSTNKSDIDSGKVSIQPMGSSFEQLSLLVYDSLIMILMKKLNKTGDE 177

Query: 204 FYVLH 208
            +  H
Sbjct: 178 MFKNH 182


>gi|171321450|ref|ZP_02910397.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
 gi|171093270|gb|EDT38471.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
          Length = 143

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVHIAPTDSIRHAAQLMERYDIGALPVCD-NNRLIGMVTDRDLTVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++V    P     ED  L      +    +  L VVD  Q+ +G++   D+
Sbjct: 67  RIQEVAS-GPIEWCFEDDPLDEIQHYMADAQLRRLPVVDHDQRLVGMLSLADI 118



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M ++   I     +  A QL+ +++I  L V D+  + IG+V   DL 
Sbjct: 4   VNEIMSQDVVHIAPTDSIRHAAQLMERYDIGALPVCDN-NRLIGMVTDRDLT 54


>gi|120609584|ref|YP_969262.1| CBS domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120588048|gb|ABM31488.1| CBS domain containing membrane protein [Acidovorax citrulli
           AAC00-1]
          Length = 383

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 50/124 (40%), Gaps = 21/124 (16%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------------- 282
           G  L +A  ++  +R   + VVD  +++ GI+T  D  R    D++              
Sbjct: 254 GTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTADFMRQIDLDVHHGIGEQLRALVRRV 313

Query: 283 --------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     V  +M +  +V+ E       + L  +     + V+D+ ++ +GI+   D
Sbjct: 314 GAVHSTKPEVVGQIMTRQVRVVSERRPALELVPLFTEDGHHHIPVIDEERRLVGIITQSD 373

Query: 335 LLRF 338
           L+R 
Sbjct: 374 LVRA 377



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 30/64 (46%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             + ++   L   D+M + P      T L  A  L+R+  I  L VVD  ++ +GIV   
Sbjct: 229 EAYRRNFGQLRCGDIMSREPVTAAFGTGLQEAWALMRRRRIKALPVVDRARRIVGIVTTA 288

Query: 334 DLLR 337
           D +R
Sbjct: 289 DFMR 292



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/91 (19%), Positives = 39/91 (42%), Gaps = 1/91 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           I L       E    ++   G + +        + +   + +V    P ++ + + +E  
Sbjct: 294 IDLDVHHGIGEQLRALVRRVGAVHSTKPEVVGQIMTRQ-VRVVSERRPALELVPLFTEDG 352

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
              + V+DE ++L GIIT+ D+ R  H+ + 
Sbjct: 353 HHHIPVIDEERRLVGIITQSDLVRALHRAVR 383


>gi|73541181|ref|YP_295701.1| CBS [Ralstonia eutropha JMP134]
 gi|72118594|gb|AAZ60857.1| CBS [Ralstonia eutropha JMP134]
          Length = 239

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 32/200 (16%), Positives = 65/200 (32%), Gaps = 15/200 (7%)

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
             VA      + +       P+G       I        + +              +  P
Sbjct: 6   HPVAGRMPGHVNVLLAEAEVPYGQVFEMEDINGEFGRAGVVLGADYVVGCRRA--GIRSP 63

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +  +      +      IP V     L + + ++++   G +AVV E   L G++T 
Sbjct: 64  INDIEAIMRVCDILQIKAGPIPFVSPNTLLSECLFVMADNDLGSLAVV-ERGTLVGLVTF 122

Query: 270 GDIFRNFHKD-----------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            +IF    +            +  +    +M   P VI  +  +     L+ QH++  + 
Sbjct: 123 REIFSAMAQHHRGRNMEHGPQVLGIRARHIMNPTPIVIDPEMGIAELRGLMVQHSLRYVP 182

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           +V       GI+ F D+ + 
Sbjct: 183 MVSKGDFL-GIISFHDVAKA 201


>gi|145592588|ref|YP_001156885.1| signal-transduction protein [Salinispora tropica CNB-440]
 gi|145301925|gb|ABP52507.1| putative signal-transduction protein with CBS domains [Salinispora
           tropica CNB-440]
          Length = 141

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFH--KDLNTLSVEDVMI 290
            +   L +   ++ E   G V   D G  L G++T+ DI  R     +D    +++ ++ 
Sbjct: 18  PVETTLDEVARVMKEADIGDVVATD-GATLAGVLTDRDIVVRAVAQRRDPARTTIDSIIT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +I ++     A  L+R+  +  ++V D  ++ +GIV   DL
Sbjct: 77  REVVMIEQNCTTGEAAALMRERGVRRVLVCDSERRLVGIVSLGDL 121



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 10/57 (17%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +  + DVM K    +  +T L    +++++ +I  ++  D      G++   D++
Sbjct: 1   MTSFRISDVMTKQVIYLPVETTLDEVARVMKEADIGDVVATDGA-TLAGVLTDRDIV 56



 Score = 36.0 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 24/51 (47%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
              + +++  C   +A  ++ E+    V V D  ++L GI++ GD+     
Sbjct: 76  TREVVMIEQNCTTGEAAALMRERGVRRVLVCDSERRLVGIVSLGDLALRLD 126


>gi|295115324|emb|CBL36171.1| Transcriptional regulators [butyrate-producing bacterium SM4/1]
          Length = 304

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 60/178 (33%), Gaps = 6/178 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +   +  LS   + +      +F      +   K R+ I G G SG  G ++  
Sbjct: 89  DTTKHVLETYQELLSRTYAVVDESQVGRFLD----LLLAKKRIYIYGKGSSGLAGEEMQF 144

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
                G     +  +        +++ + L+I +S SG ++E+   L  A+     ++ +
Sbjct: 145 RFMRIGVNVQAITDSHLMKMHSVLVSDECLVIGISVSGQTEEVIHSLKAAKAQGARVVLM 204

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           TS          D VL    +           +     L + D L    ++S  F + 
Sbjct: 205 TSRRDRSFDAFCDEVLLFAVKEHMENGRAI--SPQFPILILVDILYSHYMKSDRFRKE 260


>gi|260881451|ref|ZP_05404438.2| CBS domain protein/ACT domain protein [Mitsuokella multacida DSM
           20544]
 gi|260848814|gb|EEX68821.1| CBS domain protein/ACT domain protein [Mitsuokella multacida DSM
           20544]
          Length = 208

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 40/105 (38%), Gaps = 13/105 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
              +   V    P+ +A + + +  F  + VV E  KL G +++ DI R           
Sbjct: 1   MAKNPVTVSPDTPVDEAASAMKKGHFRRLPVV-EDGKLVGFLSDKDIMRVAPSPATTLSR 59

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                 L  L + D+M K    + ED  +  A  ++  H I  L 
Sbjct: 60  YEARSLLAKLKIGDIMNKEVISVNEDATIEEAALIMYNHKIGGLP 104


>gi|121282001|gb|ABM53574.1| putative CBS domain protein [uncultured bacterium CBNPD1 BAC clone
           1664]
          Length = 162

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     +     +L  +R G   VV +G ++ GI++E DI R        + +  V   M
Sbjct: 37  VAPTDTVGRVAELLHSRRVGA-FVVTQGDRVVGIVSERDIVRAVAGGDVGVTSRPVSAYM 95

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                       +   +  +    I  L V+ +  + +GIV   DL+++ I
Sbjct: 96  TAEDLFAAPGESVDALLTRMTDRRIRHLPVL-EAGRLVGIVSIGDLVKWKI 145


>gi|150399317|ref|YP_001323084.1| signal-transduction protein [Methanococcus vannielii SB]
 gi|150012020|gb|ABR54472.1| putative signal-transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 188

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS 284
               +  V +     D   IL +K  GC+ VV++ +K  GI+TE D+      ++L +  
Sbjct: 11  MSTPVATVTLDTTAYDVANILKDKGIGCLIVVNDAKKPVGIVTERDLALGVVSRNLKSKE 70

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V++++      I   + L  A + +   N+  L ++D  +  +GIV   D+ +
Sbjct: 71  VLVKELVSPKLISIPPKSTLMDAARKMDAENVKRLPIIDGEE-LLGIVTVSDITK 124



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 1/60 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            LSV + M      +  DT       +L+   I  L+VV+D +K +GIV   DL   G++
Sbjct: 4   ELSVTEAMSTPVATVTLDTTAYDVANILKDKGIGCLIVVNDAKKPVGIVTERDLA-LGVV 62


>gi|296268399|ref|YP_003651031.1| putative CBS domain-containing signal transduction protein
           [Thermobispora bispora DSM 43833]
 gi|296091186|gb|ADG87138.1| putative signal transduction protein with CBS domains
           [Thermobispora bispora DSM 43833]
          Length = 124

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   +V         V     L D    ++EK  G +AV+D G ++ G+ITE D+ R   
Sbjct: 1   MRIGNVYRPDVFGCWV--DERLPDVARRMAEKDVGALAVLD-GNEVVGVITERDLVRALA 57

Query: 278 K--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D+ +  V +    + +    +       + + +     + V     + +G+V   DL
Sbjct: 58  ESPDVYSARVSEFATTDVETADVEDDSREVAERMLEAGFRHMPVT-QNGEMVGMVSMRDL 116

Query: 336 L 336
           L
Sbjct: 117 L 117



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 9/40 (22%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D  L    + + + ++  L V+D   + +G++   DL+R 
Sbjct: 17  DERLPDVARRMAEKDVGALAVLD-GNEVVGVITERDLVRA 55


>gi|293569264|ref|ZP_06680562.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
 gi|291587970|gb|EFF19820.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1071]
          Length = 282

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE +++ +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLESAET-VFLYGVGASSLVVKDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKSMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSLLAQFATIDII 252


>gi|71892300|ref|YP_278034.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
 gi|71796406|gb|AAZ41157.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           pennsylvanicus str. BPEN]
          Length = 489

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 63/170 (37%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M      +LAIAL +     F   +  + H   ++  +    S ++    + 
Sbjct: 41  NIPVVSSAMDTVTESSLAIALAQEGGVGFIHKNMSLDHQINEVRRVKRYESGIV---TNP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L+    + S   F    VV    +L GI+T  D+   F  DL+   V  VM 
Sbjct: 98  QCVTPDTTLLQVKGLTSRNGFAGYPVVMNTNELVGIVTSRDVR--FVSDLSNF-VFSVMT 154

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +LE     V +  +    +  ++++D   +  G++   D  + 
Sbjct: 155 PKERLITVLEKENREVVLSKMHDKRVEKILLIDAAFRLKGMITAKDFEKA 204


>gi|16077414|ref|NP_388227.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221308158|ref|ZP_03590005.1| 6-phospho-3-hexuloisomerase (phi) [Bacillus subtilis subsp.
           subtilis str. 168]
 gi|221312483|ref|ZP_03594288.1| 6-phospho-3-hexuloisomerase (phi) [Bacillus subtilis subsp.
           subtilis str. NCIB 3610]
 gi|221317416|ref|ZP_03598710.1| 6-phospho-3-hexuloisomerase (phi) [Bacillus subtilis subsp.
           subtilis str. JH642]
 gi|221321679|ref|ZP_03602973.1| 6-phospho-3-hexuloisomerase (phi) [Bacillus subtilis subsp.
           subtilis str. SMY]
 gi|1175696|sp|P42404|PHI_BACSU RecName: Full=3-hexulose-6-phosphate isomerase; AltName:
           Full=6-phospho-3-hexuloisomerase; Short=PHI
 gi|1438846|dbj|BAA06433.1| unknown [Bacillus subtilis]
 gi|1805417|dbj|BAA08979.1| yckF [Bacillus subtilis]
 gi|2632631|emb|CAB12139.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis subsp.
           subtilis str. 168]
          Length = 185

 Score = 71.9 bits (175), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 68/180 (37%), Gaps = 12/180 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L +S     + +     + I +   ++   G G+SG +    A  L   G  + 
Sbjct: 8   AEILNELHNSAAYISNEEADQLADHILSSH-QIFTAGAGRSGLMAKSFAMRLMHMGFNAH 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   DL+I+ S SG +  L      A+     + A+T   +S +  
Sbjct: 67  IVGEILTPP-----LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGK 121

Query: 155 HADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            AD+++ +P  P+   +G    + P  S   Q      DA+ + L+E +       +  H
Sbjct: 122 QADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHH 181


>gi|332312018|gb|EGJ25113.1| CBS domain protein [Listeria monocytogenes str. Scott A]
          Length = 442

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKRLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|329117170|ref|ZP_08245887.1| CBS domain protein [Streptococcus parauberis NCFD 2020]
 gi|326907575|gb|EGE54489.1| CBS domain protein [Streptococcus parauberis NCFD 2020]
          Length = 220

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +   ++  +     +  A  +L E+    + VV E   L G++T G +            
Sbjct: 6   YMTKNVVTITPDTRVAKAADLLREEDLRRLPVV-ENGHLVGLVTAGTMADATPSKATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN   ++D+MIK    +  +  L  A+ L+  H + VL V+D  +  +GI+  
Sbjct: 65  IYEMNYLLNKTKIKDIMIKKVITVEPNASLEDAIYLMLTHKVGVLPVLDGEE-LVGIITD 123

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 124 RDVYKA 129



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +SV+D M KN   I  DT +  A  LLR+ ++  L VV +    +G+V 
Sbjct: 1   MSVKDYMTKNVVTITPDTRVAKAADLLREEDLRRLPVV-ENGHLVGLVT 48



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V+    L DAI ++   + G + V+D G++L GIIT+ D+++ F
Sbjct: 81  MIKKVITVEPNASLEDAIYLMLTHKVGVLPVLD-GEELVGIITDRDVYKAF 130


>gi|323700982|gb|ADY00133.1| putative inosine monophosphate dehydrogenase [Penicillium
           brevicompactum]
          Length = 527

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/194 (21%), Positives = 67/194 (34%), Gaps = 11/194 (5%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S+    AD+ L             AP  S+ M       +AI +           +  
Sbjct: 46  PGSITFSAADVSLDTKVTRRFTI--KAPLLSSPMDTVTEHNMAIHMALLGGLG--VIHNN 101

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKL 263
            P      +        +     P+V      + +A  + ++  FG   V ++G    KL
Sbjct: 102 CPPDDQAEMVRKVKRYENGFILDPVVLSPSTTVAEAKELKTKWNFGGFPVTEKGTLHSKL 161

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
            GI+T  DI   FHK      V  VM  +       T L  A ++LR      L +VD  
Sbjct: 162 LGIVTSRDI--QFHKTPED-PVTAVMSTDLVTAPAGTTLAEANEVLRSSKKGKLPIVDKD 218

Query: 324 QKAIGIVHFLDLLR 337
              + ++   DL++
Sbjct: 219 GLLVSLLSRSDLMK 232


>gi|313634727|gb|EFS01174.1| RpiR family transcriptional regulator [Listeria seeligeri FSL
           N1-067]
          Length = 275

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 2/141 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  +    + KI     R+   G G S  +    +     +G  +     +         
Sbjct: 104 LDSELVTDLAKILYEAERIDFYGCGISNLVAQDFSYRFFRSGKNTSAFADSHMQISQAQQ 163

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
                + + +S+ G + E+   L  A++     I+ TSE  + +A  A   +T       
Sbjct: 164 SGAGCVAVGISYGGETQEVITALEIAQQLGAYTISFTSEADNSLAQVASCNIT--VAQIE 221

Query: 169 CPHGLAPTTSAIMQLAIGDAL 189
            P G     S I  L + D +
Sbjct: 222 HPEGYVAGASRIEMLHVMDII 242


>gi|153835289|ref|ZP_01987956.1| transcriptional regulator HexR [Vibrio harveyi HY01]
 gi|148868201|gb|EDL67349.1| transcriptional regulator HexR [Vibrio harveyi HY01]
          Length = 287

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 106 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFE 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 165 DIVMQRMSCINCSDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASS 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + +TL    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 224 LAITLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 262


>gi|115379651|ref|ZP_01466733.1| CBS [Stigmatella aurantiaca DW4/3-1]
 gi|115363335|gb|EAU62488.1| CBS [Stigmatella aurantiaca DW4/3-1]
          Length = 142

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 54/110 (49%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVM 289
           ++    L DA   + ++ FG + V    QK+ G++T+ DI  +   +  D     V D++
Sbjct: 14  IRPDQTLTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIVFQAIAERLDPQQTPVSDIL 72

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + P +   ED  L  A +L+ +H +  L V+D  Q  +G+V   D+ R 
Sbjct: 73  SEGPPRYAFEDDELATAARLMTEHGLPRLPVLDRHQNLVGMVSLKDVSRE 122



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +  VM ++   I  D  LT A + +RQ    +L V    QK IG++   D++
Sbjct: 1   MKLSMVMNRDVTSIRPDQTLTDAAKHMRQQGFGLLPVC-HVQKMIGLLTDRDIV 53


>gi|91773707|ref|YP_566399.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712722|gb|ABE52649.1| Cystathionine beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 258

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 51/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
                  V  G  +     I+ +K  G   V+ E  KL GI+TE DI ++          
Sbjct: 132 MNKDPITVHPGDRVSHIRHIILDKDIGRFPVI-EDGKLIGIVTEQDIAKSMRAFRDIVSG 190

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  L VED+M +  K +  +TL++    ++ +  I  L VV+     +G +   
Sbjct: 191 NQQDTRIKNLIVEDIMKRGVKTVQSNTLMSDVTAMMLKEKIGGLPVVNLEGDMVGFITRR 250

Query: 334 DLLRF 338
           +++  
Sbjct: 251 NIISA 255



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 10/147 (6%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           I +L  R  ++        G K  +    A+ V    D    V     + DA+T++++ R
Sbjct: 43  IGILTMRGLTKE-LGTRKKGAKPASSLHVATAVS---DDFVKVLPDMDVDDALTLMAKNR 98

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + +V E +K+ G +T  ++  N   D       ++M K+P  +     ++    ++ 
Sbjct: 99  --GIIIVSENEKILGWVTPNEVLANSQIDGY---AAEIMNKDPITVHPGDRVSHIRHIIL 153

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +I    V+ +  K IGIV   D+ +
Sbjct: 154 DKDIGRFPVI-EDGKLIGIVTEQDIAK 179



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+D+M   P  I +   ++ A+ ++ +     L+V     K IGI+    L + 
Sbjct: 1   MQVKDIM-VQPISIDKADTISHALDVMEKKATRRLLV-KHDDKLIGILTMRGLTKE 54


>gi|46907807|ref|YP_014196.1| CBS domain-containing protein [Listeria monocytogenes serotype 4b
           str. F2365]
 gi|226224177|ref|YP_002758284.1| hypothetical protein Lm4b_01587 [Listeria monocytogenes Clip81459]
 gi|254824365|ref|ZP_05229366.1| CBS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|254852199|ref|ZP_05241547.1| CBS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|254931516|ref|ZP_05264875.1| CBS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|255521291|ref|ZP_05388528.1| hypothetical protein LmonocFSL_08715 [Listeria monocytogenes FSL
           J1-175]
 gi|300765998|ref|ZP_07075969.1| hypothetical protein LMHG_11684 [Listeria monocytogenes FSL N1-017]
 gi|46881076|gb|AAT04373.1| CBS domain protein [Listeria monocytogenes serotype 4b str. F2365]
 gi|225876639|emb|CAS05348.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605505|gb|EEW18113.1| CBS domain-containing protein [Listeria monocytogenes FSL R2-503]
 gi|293583069|gb|EFF95101.1| CBS domain-containing protein [Listeria monocytogenes HPB2262]
 gi|293593599|gb|EFG01360.1| CBS domain-containing protein [Listeria monocytogenes FSL J1-194]
 gi|300513316|gb|EFK40392.1| hypothetical protein LMHG_11684 [Listeria monocytogenes FSL N1-017]
 gi|328465074|gb|EGF36348.1| hypothetical protein LM1816_12707 [Listeria monocytogenes 1816]
          Length = 437

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKRLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|239927250|ref|ZP_04684203.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 141

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    +  A  ++ E+  G V V      L G++T+ DI  R   +  D   ++V  + 
Sbjct: 16  VEPMTSVARAARLMRERDIGDVLV-AYDCDLFGLLTDRDIVLRAVAEGHDPEAMTVGSLC 74

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + P   +  +     A++L+RQ+ +  L VV+     +G+V   DL
Sbjct: 75  TRPPLVTLTPEDTTEHAVELMRQYAVRRLPVVERGGCPVGVVSLGDL 121



 Score = 36.0 bits (82), Expect = 9.3,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           T  + DVM  +   +   T +  A +L+R+ +I  ++V  DC    G++   D+ LR 
Sbjct: 2   TRRIRDVMSSDTASVEPMTSVARAARLMRERDIGDVLVAYDCD-LFGLLTDRDIVLRA 58


>gi|212223482|ref|YP_002306718.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus onnurineus
           NA1]
 gi|212008439|gb|ACJ15821.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus onnurineus
           NA1]
          Length = 406

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/214 (20%), Positives = 78/214 (36%), Gaps = 24/214 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VTRK   L     +    +++      ++ +  S++ E    F  A   I A   ++ I
Sbjct: 198 DVTRKIIDLFWGEYMMTIRKAMTDILEHINQVAESIKLEQVRGFVDA--MIGA--NKIFI 253

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G+SG +G   A  L       + V                DL+I +S SG +  +  
Sbjct: 254 YGAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEPGDLLIAISGSGETKSIVD 308

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPT 176
               A+R    ++AITS   S +   +D+V+ +P   ++                 +AP 
Sbjct: 309 AAEIAKRQGGKVVAITSYANSTLGKLSDVVVEIPGRTKADIPTDYIARQMLTKYKWIAPM 368

Query: 177 TSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +      +   D +   L+ +   +E D    H
Sbjct: 369 GTLFEDSTMIFLDGIIALLMATFQKTEKDMKKKH 402


>gi|150015649|ref|YP_001307903.1| RpiR family transcriptional regulator [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902114|gb|ABR32947.1| transcriptional regulator, RpiR family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 291

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 67/171 (39%), Gaps = 4/171 (2%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
            + L  N+ +Q  L++I+     +  L+ ++           +E IK  +  V    +G 
Sbjct: 96  SNELDSNNIMQS-LQNIL--ANKIEELKQTISMMNEGNIKRILEAIKGAR-IVQFAAVGN 151

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           +  +    A      G  S      E        +T++D++IV+S SG+S EL A+L  A
Sbjct: 152 TIPVAMDGAYKFNQLGISSVTNTIWETQLAFSYTLTKEDVVIVISNSGASKELVALLEIA 211

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
                  I+IT+   S VA  +   +      +      + +  + M +  
Sbjct: 212 NERQATTISITNHENSPVANKSKYHINTSTREKLFLDEFSFSRVSAMVVIE 262


>gi|322514471|ref|ZP_08067510.1| RpiR family transcriptional regulator [Actinobacillus ureae ATCC
           25976]
 gi|322119610|gb|EFX91681.1| RpiR family transcriptional regulator [Actinobacillus ureae ATCC
           25976]
          Length = 290

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 2/160 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L+++ +     L FQ    V K      R+ + G+G SG         L   G  +  V
Sbjct: 109 SLNNVIAETINLLDFQELENVVKELQKAQRIFLFGVGSSGLTAEDAKHKLMRIGLQTDAV 168

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                 +    ++   D++I +S SG SDE+ + L  AR+ +   +AIT   +S +   A
Sbjct: 169 TNNHFMYMQASLLREGDVVIGISHSGYSDEVISSLRIARKNNAKTVAITHYIRSPITNVA 228

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           D VL                 + + QL + D +   L+++
Sbjct: 229 DYVLINGNRQG--HMQGDSIGTKMSQLFVLDLIYALLVKA 266


>gi|291435592|ref|ZP_06574982.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
 gi|291338487|gb|EFE65443.1| oxidoreductase [Streptomyces ghanaensis ATCC 14672]
          Length = 143

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVM 289
           V+    +  A  ++ E+  G V V      L G++T+ DI  R   +  D   ++V  + 
Sbjct: 18  VEPMTSVARAARLMRERDIGDVLV-AYDCDLFGLLTDRDIVLRAVAEGHDPEAMTVGSLC 76

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + P   +  +     A++L+RQ+ +  L VV+     +G+V   DL
Sbjct: 77  TRPPLVTLTPEDTTEHAVELMRQYAVRRLPVVERGGCPVGVVSLGDL 123



 Score = 36.0 bits (82), Expect = 9.4,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRF 338
           T  + DVM  +   +   T +  A +L+R+ +I  ++V  DC    G++   D+ LR 
Sbjct: 4   TRRIRDVMSSDTASVEPMTSVARAARLMRERDIGDVLVAYDCD-LFGLLTDRDIVLRA 60


>gi|229823470|ref|ZP_04449539.1| hypothetical protein GCWU000282_00768 [Catonella morbi ATCC 51271]
 gi|229787245|gb|EEP23359.1| hypothetical protein GCWU000282_00768 [Catonella morbi ATCC 51271]
          Length = 214

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
           +    +  +     +I A+ ++ +     + VV +  +L G++TE  I +N         
Sbjct: 6   YMSTDLVTITPDTTVIKALDLMRQHDIHRLPVVVK-GQLVGLLTESVIAKNSPSTATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  LN  +  D+MI+       D LL  A   +R  ++ VL+V+D  Q  +GI+  
Sbjct: 65  VHELNYLLNKTTAADIMIRRVITTSPDALLEQAASEMRNMDVGVLVVMDHAQ-LVGIITD 123

Query: 333 LDLLRF 338
            D+   
Sbjct: 124 KDIFEA 129



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V++ M  +   I  DT +  A+ L+RQH+I  L VV    + +G++ 
Sbjct: 3   VKNYMSTDLVTITPDTTVIKALDLMRQHDIHRLPVV-VKGQLVGLLT 48



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                L  A + +     G V VV +  +L GIIT+ DIF  F
Sbjct: 89  SPDALLEQAASEMRNMDVG-VLVVMDHAQLVGIITDKDIFEAF 130


>gi|163787050|ref|ZP_02181497.1| CBS domain protein, putative [Flavobacteriales bacterium ALC-1]
 gi|159876938|gb|EDP70995.1| CBS domain protein, putative [Flavobacteriales bacterium ALC-1]
          Length = 161

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 53/143 (37%), Gaps = 8/143 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        + +          +   I   K    + + +  L + +     VV+E  +L
Sbjct: 6   FQGARKQQNVTSSTSLKVKDYMTTQLITF-KPNQSVQEVVESLIKNKISGGPVVNEKNEL 64

Query: 264 KGIITEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            GII+EGD        R ++  L+  +VE  M  N + I  +  +  A     Q      
Sbjct: 65  VGIISEGDCLKQLSESRYYNMPLDHDNVEKRMATNVETIDGNMDVFDAANKFLQSKRRRF 124

Query: 318 MVVDDCQKAIGIVHFLDLLRFGI 340
            +V +  K +G +   D+L+  +
Sbjct: 125 PIV-ENGKLVGQISQKDILKAAL 146


>gi|110667392|ref|YP_657203.1| CBS domain-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109625139|emb|CAJ51558.1| CBS domain protein [Haloquadratum walsbyi DSM 16790]
          Length = 139

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/104 (20%), Positives = 41/104 (39%), Gaps = 2/104 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMIK 291
           +    + +A   + +     V VV +G +  GI T  D        +  +  +V++ M  
Sbjct: 18  EAETLVSEAADAMRKATIKSVVVVSDGCQPAGIFTSTDALSVIADGVPTDETTVKEYMTT 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +  D  L  A + + +   S L V D     +GI+   D+
Sbjct: 78  GVETVSPDVALAAAAEQMHEGGYSHLPVADADGDGVGILTKTDI 121



 Score = 44.1 bits (103), Expect = 0.027,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 28/57 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  L V+DVM      +  +TL++ A   +R+  I  ++VV D  +  GI    D L
Sbjct: 1   MTELRVKDVMTTPMLTLEAETLVSEAADAMRKATIKSVVVVSDGCQPAGIFTSTDAL 57


>gi|307547017|ref|YP_003899496.1| RpiR family transcriptional regulator [Halomonas elongata DSM 2581]
 gi|307219041|emb|CBV44311.1| transcriptional regulator, RpiR family [Halomonas elongata DSM
           2581]
          Length = 286

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 70/183 (38%), Gaps = 8/183 (4%)

Query: 17  SLMKNSTVQCALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           S+  + +V    +SI     G L S+   L  E       A+  + A+  RV   G G S
Sbjct: 86  SMNDSDSVAEFSQSIFDSTVGTLLSVRDRLDNE---SLSQAINAL-AMANRVEFYGFGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +              +   +     +     +   D+++ +S +G +  L A +  AR
Sbjct: 142 GAVAFDAQHKFFRLQISTAAYNDPHMQNMSAATLKEGDVVVAISQTGRTRALVASVRLAR 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                +I +     S +A    + L +    ++  +   P +S I  L + D LA+ + +
Sbjct: 202 DAGATVIGLCPS-DSPLAGEVTLPLYIDVHEDTEIY--TPMSSRIAHLVLIDVLAVGVAK 258

Query: 196 SRN 198
           +R 
Sbjct: 259 TRG 261


>gi|302348246|ref|YP_003815884.1| 6-Phospho-3-hexuloisomerase (PHI) [Acidilobus saccharovorans
           345-15]
 gi|302328658|gb|ADL18853.1| 6-Phospho-3-hexuloisomerase (PHI) [Acidilobus saccharovorans
           345-15]
          Length = 203

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 20/164 (12%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   KG+ ++ G G+SG +G   A  L   G  S+ +            I++ D+ I +S
Sbjct: 40  VYRRKGKALVMGAGRSGLVGKAFAMRLLHLGFNSYVLGETIVP-----SISKGDVAIAIS 94

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG------- 172
            SG +  +      A++    +IAIT+  +S +   AD+V+ +P   +            
Sbjct: 95  GSGRTGLIVDAADAAKKVGAYVIAITTFPESPLGSIADLVVRIPGRSKISKMDDYFARQI 154

Query: 173 ------LAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
                 LAP  +     A+   D +   L+   N SE++    H
Sbjct: 155 LGLHEPLAPLGTLFEDTAMLFLDGVVYYLMIKLNVSEDEMRSRH 198


>gi|254381613|ref|ZP_04996977.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194340522|gb|EDX21488.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 202

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMI 290
           V       D +  + + R   + V+ E   + G+++E D+            ++   +M 
Sbjct: 19  VDRRTAFKDIVEAMRQWRISALPVLSEEGLVAGVVSEADLLLKAQGGDESRAVTAGQLMT 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + +D  +  A +L+ + ++  L VVD   + IG+V   DLL+ 
Sbjct: 79  VPAVTVTKDATIPGAARLMARGHLKRLPVVDGDGRLIGVVSRGDLLKI 126



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 13/93 (13%), Positives = 33/93 (35%), Gaps = 7/93 (7%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           + G      +           V     +  A  +++      + VVD   +L G+++ GD
Sbjct: 63  QGGDESRAVTAGQLMTVPAVTVTKDATIPGAARLMARGHLKRLPVVDGDGRLIGVVSRGD 122

Query: 272 IFRN-------FHKDLNTLSVEDVMIKNPKVIL 297
           + +          ++L  L + +++   P  + 
Sbjct: 123 LLKIYLRPDADIAEELRELIMAELIPAGPGTVR 155


>gi|149200208|ref|ZP_01877231.1| inosine-5'-monophosphate dehydrogenase [Lentisphaera araneosa
           HTCC2155]
 gi|149136745|gb|EDM25175.1| inosine-5'-monophosphate dehydrogenase [Lentisphaera araneosa
           HTCC2155]
          Length = 500

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 61/168 (36%), Gaps = 14/168 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M    G ++AIA+            V+H    +         V    + +  
Sbjct: 51  NIPFVSAAMDTVTGPSMAIAIARLGGIG-----VIHKNMDIALHAEAVKKVKLHSNGLIQ 105

Query: 233 VK----IGCPLIDAITILSEKR--FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
                     + + +    EKR  F    +VD   ++ GI+T  D+      + + L ++
Sbjct: 106 DPVSFQESQTVEELLNYKDEKRLPFSGFPIVDANGRVAGILTAKDLKFC---NDSRLKLK 162

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           DVM  +     E T L  A +++    I  L ++ +     G+  F D
Sbjct: 163 DVMTSSILTANEGTTLEDAYKIMIDKKIGKLPLLCENGSLAGLYSFHD 210


>gi|146312873|ref|YP_001177947.1| transcriptional regulator [Enterobacter sp. 638]
 gi|145319749|gb|ABP61896.1| transcriptional regulator [Enterobacter sp. 638]
          Length = 274

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 4/136 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L      L  E+  +   A+ + ++    V I G+  S  IG  L   L   G P+   
Sbjct: 101 ALQDTSRLLDREILLKAAQALHQSRS----VYIYGVAASAIIGDYLHYKLLRLGKPAQLF 156

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                +  +   +T DDL++ +S SGS+ +L  ++  AR+    ++A+++  +S +   +
Sbjct: 157 SDMHRASMNATTLTSDDLVVAISSSGSTRDLLHVVKLARKRGAHVLALSNTPRSPLTSLS 216

Query: 157 DIVLTLPKEPESCPHG 172
           D++L   K       G
Sbjct: 217 DMLLVAAKPEGPLSAG 232


>gi|88604169|ref|YP_504347.1| signal transduction protein [Methanospirillum hungatei JF-1]
 gi|88189631|gb|ABD42628.1| putative signal transduction protein with CBS domains
           [Methanospirillum hungatei JF-1]
          Length = 292

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 3/101 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVI 296
            L +AI + +        V+D G  L+GI+T  DI     +DL     V +VM ++    
Sbjct: 189 TLKEAIRLFNTHHIHGAPVMD-GGFLRGIVTMSDILHAIEQDLPLDTRVCEVMTEDVVYA 247

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                L   ++  ++ +I  L+V ++  + +GI+   D+ R
Sbjct: 248 DASVQLYEVIRKFKERSIGRLVVFEE-NRPVGILTQSDIFR 287



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    + D M    K++     L  A++L   H+I    V+D      GIV   D+L  
Sbjct: 168 LPKKPIRDYMTTPIKMLSTKNTLKEAIRLFNTHHIHGAPVMD-GGFLRGIVTMSDILHA 225


>gi|331681025|ref|ZP_08381662.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli H299]
 gi|331081246|gb|EGI52407.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli H299]
          Length = 296

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R  + G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQR-DLYGAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|270616372|ref|ZP_06221736.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           HK1212]
 gi|270317976|gb|EFA29271.1| inosine-5'-monophosphate dehydrogenase [Haemophilus influenzae
           HK1212]
          Length = 102

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 5/95 (5%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLT 303
           + +  F    VVD    L GIIT  D    F KDL+  +V  VM K      + E     
Sbjct: 1   MKKNGFAGYPVVDSENNLIGIITGRDTR--FVKDLSK-TVSQVMTKKDRLVTVKEGATRE 57

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + L+ QH +  +++V+D  K  G++   D  + 
Sbjct: 58  EILALMHQHRVEKVLMVNDSFKLKGMITVKDFQKA 92



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 29/60 (48%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             S VM   D +  VK G    + + ++ + R   V +V++  KLKG+IT  D  +   K
Sbjct: 36  TVSQVMTKKDRLVTVKEGATREEILALMHQHRVEKVLMVNDSFKLKGMITVKDFQKAEQK 95


>gi|170727855|ref|YP_001761881.1| CBS domain-containing protein [Shewanella woodyi ATCC 51908]
 gi|169813202|gb|ACA87786.1| CBS domain containing protein [Shewanella woodyi ATCC 51908]
          Length = 134

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 52/133 (39%), Gaps = 14/133 (10%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +           +  + +   L  A  I     F  + VV E  +L+G+++E D  R   
Sbjct: 1   MDIQVSEIMTSRVVTIDMDDRLSVAKEIFDNAPFHHLLVV-EHNQLQGVLSERDFLRALS 59

Query: 278 KDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            ++                   VM +NP  I     +  A +LL +H I  L V+ +  +
Sbjct: 60  PNIGNINETERDSDTLLKRAHQVMARNPITIEAKENINCASKLLLEHGIGSLPVL-EQGE 118

Query: 326 AIGIVHFLDLLRF 338
            +GI+ + DLLR 
Sbjct: 119 LVGIITWKDLLRA 131


>gi|21219963|ref|NP_625742.1| inosine 5-monophosphate dehydrogenase [Streptomyces coelicolor
           A3(2)]
 gi|7209221|emb|CAB76883.1| putative inosine monophosphate dehydrogenase [Streptomyces
           coelicolor A3(2)]
          Length = 483

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 4/120 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 H  D+  ++     + DA+ +L ++      VVDE  K  G++T+ D+    + 
Sbjct: 91  WVKSRHHVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDEDGKPVGVVTDTDL----NG 146

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +E+VM K+  +I  D     A   L   N      VD   +  GI+     LR 
Sbjct: 147 VDRFTQLEEVMSKDLILIDADLDPREAFNTLDAANRRYAPAVDKDGRLAGILTRKGALRA 206


>gi|16080022|ref|NP_390848.1| acetoin degradation regulation pathway protein [Bacillus subtilis
           subsp. subtilis str. 168]
 gi|221310914|ref|ZP_03592761.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]
 gi|221315241|ref|ZP_03597046.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. NCIB
           3610]
 gi|221320158|ref|ZP_03601452.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str.
           JH642]
 gi|221324439|ref|ZP_03605733.1| acetoin dehydrogenase [Bacillus subtilis subsp. subtilis str. SMY]
 gi|728800|sp|P39066|ACUB_BACSU RecName: Full=Acetoin utilization protein AcuB
 gi|348051|gb|AAA68285.1| acetoin utilization protein [Bacillus subtilis]
 gi|2293317|gb|AAC00395.1| acetoin catabolism protein AcuB [Bacillus subtilis]
 gi|2635454|emb|CAB14948.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis subsp. subtilis str. 168]
          Length = 214

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/110 (30%), Positives = 50/110 (45%), Gaps = 9/110 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTL----SVED 287
              L  AI  L E     + VVDE + + G+IT+ D+ +     F ++  +L    SV+ 
Sbjct: 17  TDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQASPSIFEENKRSLFLTRSVDS 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+         +     +  +H I  L VV   QK IGI+   DLLR
Sbjct: 77  IMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVV-HHQKLIGILTKTDLLR 125



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE +M ++   + +   L  A+  L++ +I  L VVD+ +  IG++   D+ + 
Sbjct: 3   VEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEERHVIGMITDRDMKQA 56


>gi|238788081|ref|ZP_04631876.1| RpiR-family transcriptional regulator [Yersinia frederiksenii ATCC
           33641]
 gi|238723668|gb|EEQ15313.1| RpiR-family transcriptional regulator [Yersinia frederiksenii ATCC
           33641]
          Length = 292

 Score = 71.9 bits (175), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/190 (19%), Positives = 70/190 (36%), Gaps = 5/190 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE---KIKAIKGR 66
           +      + + ++ VQ    ++    +  S++ + L   L+     +VE   K+     R
Sbjct: 85  ATRHNSENSLLDADVQEGDDTLAIGAKLQSAINNVLSETLNLLSIESVEQVVKLLRPADR 144

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G+G SG         L   G            +    ++   D+ I +S SG+S E
Sbjct: 145 ICIFGVGSSGITAEDAKGKLMRIGLRVDAATNNHFMYMQASLMHPGDVAIGISHSGTSAE 204

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
               L  A++     +A+T    S +   AD VL                 + I QL + 
Sbjct: 205 TVHALKLAKQAGATTVALTHNMGSTITELADYVLINGNRQGQLQGDSI--GTKIAQLFVL 262

Query: 187 DALAIALLES 196
           D +   L+++
Sbjct: 263 DLIYALLVKA 272


>gi|325568630|ref|ZP_08144923.1| thioesterase [Enterococcus casseliflavus ATCC 12755]
 gi|325157668|gb|EGC69824.1| thioesterase [Enterococcus casseliflavus ATCC 12755]
          Length = 443

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 141 LIAITSENKSVVACH--ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +I         +A    A +++T   E       LA      +     D   +A + +R 
Sbjct: 119 VIVGNRNEVHKLALEDGAAVLITGGFETTEEICRLADELELPILQTTYDTFTVATMINRA 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S+           +    +  SD+    +    +     + D   +          VV+
Sbjct: 179 LSD---------QLIKKDIMLVSDIYMPLEKTKYLHTFDTVKDYKLLSESTNHSRYPVVN 229

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +  ++ GIIT  D+        +T  +E +M + P+V+ ++  +  A   +    + V+ 
Sbjct: 230 KNMRVVGIITAKDVLEK----PDTQIIERIMTREPRVVKKEMSVASASHQMIWDGLEVMP 285

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV D    IGIV   D+++ 
Sbjct: 286 VVADDLSLIGIVTRQDIMKA 305



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +VK    +  A   +       + VV +   L GI+T  DI +          +
Sbjct: 256 MTREPRVVKKEMSVASASHQMIWDGLEVMPVVADDLSLIGIVTRQDIMKAMQMVQRQTQI 315

Query: 286 ED 287
            D
Sbjct: 316 SD 317


>gi|293375744|ref|ZP_06622015.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325841748|ref|ZP_08167442.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|292645613|gb|EFF63652.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325489867|gb|EGC92218.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 241

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 62/136 (45%), Gaps = 10/136 (7%)

Query: 32  IAEKRGLSSLESSL-------QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           I EK+ L+ +   +         E         + +   K +++  GIG SG +G   A 
Sbjct: 73  IKEKQPLNDISEIIHYFQSVNNEEFEQNISQVAQLVSQAK-QIIFVGIGTSGILGKYGAR 131

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
             ++ G  S+F+      + ++G I+ D ++I+LS SG +++   +  +  +    L++I
Sbjct: 132 YFSNIGKFSYFIDDP--FYPNIGGISDDAVVIMLSVSGETEQTLNLARFFLQQRCTLVSI 189

Query: 145 TSENKSVVACHADIVL 160
           T+   S +A  +   L
Sbjct: 190 TNSTNSTLAKMSQYNL 205


>gi|290955600|ref|YP_003486782.1| hypothetical protein SCAB_10371 [Streptomyces scabiei 87.22]
 gi|260645126|emb|CBG68212.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 209

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/126 (15%), Positives = 49/126 (38%), Gaps = 14/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKD 279
              ++  V    P  + + +  + +   + V++   ++ G+++E D+           + 
Sbjct: 13  MTHTVVAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADLLHKEEFRDADERQ 72

Query: 280 LN--------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +         ++  ++M      +  D  L  A +++ +  +  L VVD      G+V 
Sbjct: 73  GDFADRLKAGAVTAGELMNAPAVSVHPDASLAEAARIMARRKVKRLPVVDRVGMLQGVVS 132

Query: 332 FLDLLR 337
             DLL+
Sbjct: 133 RGDLLK 138



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 25/53 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM      +  D      +QL  Q  +S L V++   + +G+V   DLL
Sbjct: 8   TVSDVMTHTVVAVGRDAPFKEIVQLFDQWKVSALPVLEGEGRVVGVVSEADLL 60



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 17/89 (19%), Positives = 35/89 (39%), Gaps = 8/89 (8%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            + DF      G +    +              V     L +A  I++ ++   + VVD 
Sbjct: 71  RQGDFADRLKAGAVTAGEL-------MNAPAVSVHPDASLAEAARIMARRKVKRLPVVDR 123

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
              L+G+++ GD+ + F +    L  E++
Sbjct: 124 VGMLQGVVSRGDLLKVFLRPDEEL-AEEI 151


>gi|296134987|ref|YP_003642229.1| DegT/DnrJ/EryC1/StrS aminotransferase [Thiomonas intermedia K12]
 gi|295795109|gb|ADG29899.1| DegT/DnrJ/EryC1/StrS aminotransferase [Thiomonas intermedia K12]
          Length = 502

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 38/108 (35%), Gaps = 11/108 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------HKDLNTLSVED 287
             G  L +A+  L     G + V D  ++L   +T+GD+ R           L+ L    
Sbjct: 12  PPGATLHEALARLDATAQGILLVTDAQERLLRTVTDGDLRRAALAGVSNEAPLSALPA-- 69

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                P  +         + L+    I  + VVD     + +V   +L
Sbjct: 70  ---HPPHTVGLQASQRDVLALMDAQRIDHVPVVDAAGHVVDLVTRREL 114



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 8/47 (17%), Positives = 18/47 (38%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                  V +     D + ++  +R   V VVD    +  ++T  ++
Sbjct: 68  PAHPPHTVGLQASQRDVLALMDAQRIDHVPVVDAAGHVVDLVTRREL 114


>gi|146283857|ref|YP_001174010.1| CBS domain-containing protein [Pseudomonas stutzeri A1501]
 gi|145572062|gb|ABP81168.1| CBS-domain-containing membrane protein [Pseudomonas stutzeri A1501]
          Length = 345

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKD-----------LNT 282
               +  A   L   R   + VV  +  +L GI+T+ D+ ++FH             L  
Sbjct: 219 PDTFIEQAWQTLQAHRLRSLPVVQGDDHRLVGIVTQVDLLKHFHPRPGRLSFGQLNFLRG 278

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  +M      +  DT +   + LL    +  L VVD  Q+ +G++   DL+  
Sbjct: 279 TKLRAIMSSPVVSVTPDTHMVELVYLLSDRGLHCLPVVDAQQRLVGMITQTDLIAA 334



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 267 ITEGDIFR--------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +T  D+ R           + +  ++   VM ++      DT +  A Q L+ H +  L 
Sbjct: 180 VTRDDLERLIKQTEKHALRRSMGEVTAAHVMSRDLYWHTPDTFIEQAWQTLQAHRLRSLP 239

Query: 319 VV-DDCQKAIGIVHFLDLLR 337
           VV  D  + +GIV  +DLL+
Sbjct: 240 VVQGDDHRLVGIVTQVDLLK 259



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 28/51 (54%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           V     +++ + +LS++   C+ VVD  Q+L G+IT+ D+    +++    
Sbjct: 292 VTPDTHMVELVYLLSDRGLHCLPVVDAQQRLVGMITQTDLIAALYRNWLKQ 342


>gi|114563439|ref|YP_750952.1| signal transduction protein [Shewanella frigidimarina NCIMB 400]
 gi|114334732|gb|ABI72114.1| putative signal transduction protein with CBS domains [Shewanella
           frigidimarina NCIMB 400]
          Length = 152

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/125 (25%), Positives = 52/125 (41%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  +++   LI A  I     F  + VVD  ++L GI++  D  R    ++ T   
Sbjct: 26  MTTRVVTIEMDDRLILAKEIFDNVSFHHLLVVD-NEQLSGILSHRDFLRALSPNIGTAAE 84

Query: 283 ---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      V  VM  NP  I     +  A +L+  H+I  L V+D+    +GI+ + 
Sbjct: 85  LMRDTETLQKRVHQVMTHNPFTIAPHCDINQATKLILDHDIGCLPVLDN-NVIVGIITWK 143

Query: 334 DLLRF 338
           DLL  
Sbjct: 144 DLLNA 148



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             L V D+M      I  D  L +A ++    +   L+VVD+ Q   GI+   D LR 
Sbjct: 18  KHLCVADIMTTRVVTIEMDDRLILAKEIFDNVSFHHLLVVDNEQ-LSGILSHRDFLRA 74


>gi|161528779|ref|YP_001582605.1| signal transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160340080|gb|ABX13167.1| putative signal transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 285

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/138 (18%), Positives = 52/138 (37%), Gaps = 2/138 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D  +                     +    V     +   + ++ E+  G + V  
Sbjct: 47  ITEKDIGLFLLTDDTERNLADIPASQIMNNFTS-VNESMSVEKCVELMLEQNIGSLGVSS 105

Query: 259 EGQKLKGIITEGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
              +L GIIT+ DI + + ++ +   +V D+M  +      D  L   +Q + +  IS +
Sbjct: 106 SQNELVGIITKTDIAKYYSQNYVGKHTVGDIMTISYIAANSDDYLKDVVQKMVEEKISRI 165

Query: 318 MVVDDCQKAIGIVHFLDL 335
            + +      GI+ F DL
Sbjct: 166 FLKNKENDPEGILTFRDL 183



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 45/108 (41%), Gaps = 7/108 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVMI 290
              L   IT + +     + V+ +G    GIITE DI          ++L  +    +M 
Sbjct: 17  NESLDKIITKMLKDNISRI-VLTQGNSPVGIITEKDIGLFLLTDDTERNLADIPASQIMN 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N   + E   +   ++L+ + NI  L V     + +GI+   D+ ++
Sbjct: 76  -NFTSVNESMSVEKCVELMLEQNIGSLGVSSSQNELVGIITKTDIAKY 122



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 34/169 (20%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ D    +    +G       D+M              L D +  + E++   + + +
Sbjct: 114 ITKTDIAKYYSQNYVGK--HTVGDIMTISYIAA--NSDDYLKDVVQKMVEEKISRIFLKN 169

Query: 259 EGQKLKGIITEGDI--------------------------FRNFHKD---LNTLSVEDVM 289
           +    +GI+T  D+                           + F  D     T   +DVM
Sbjct: 170 KENDPEGILTFRDLFHVALEKGNTDAVLDNADDAISVVFTRKGFLSDSGFGATTMAKDVM 229

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K+ + I  +  LTVA +++ Q+ I+ L V     K  G++   D L+ 
Sbjct: 230 TKSFETIDFEEELTVACKVMAQNKINGLGV-KINGKLGGVLSKTDTLKA 277


>gi|218281284|ref|ZP_03487781.1| hypothetical protein EUBIFOR_00345 [Eubacterium biforme DSM 3989]
 gi|218217531|gb|EEC91069.1| hypothetical protein EUBIFOR_00345 [Eubacterium biforme DSM 3989]
          Length = 276

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 66/167 (39%), Gaps = 5/167 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
             S +  +L +I+     +S L ++++     QF   +  I+  K  V++  +G +  + 
Sbjct: 85  STSDISGSLETIL--SNKISELTATIRNIDVDQFSVILSLIQNAK-HVLVCAVGNTVPVA 141

Query: 80  SKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                     G  +F     E      LG +  +D++I +S SG S ++ A+    ++  
Sbjct: 142 LDCMFKFNEIGILTFTSTIWENQVSYALG-LDSNDVVIAISNSGESSQVLAVCKEMKKRG 200

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +P I IT+   SVVA      +      +   +    +  +   +  
Sbjct: 201 VPTIGITNNEDSVVAKECVYHIQTSTREKLFLNEFCFSRISAATIIE 247


>gi|307945500|ref|ZP_07660836.1| signal-transduction protein [Roseibium sp. TrichSKD4]
 gi|307771373|gb|EFO30598.1| signal-transduction protein [Roseibium sp. TrichSKD4]
          Length = 143

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 4/110 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMI 290
           K    L D  T L+E + G + + D+   ++GII+E DI +       T     V +VM 
Sbjct: 18  KSTTLLSDICTTLAEHKIGAIVIADDAGHIEGIISERDIVKAIGTSGPTALEKPVSEVMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           K+     +   +   M  +       + V DD  K  G++   D+++F I
Sbjct: 78  KSVVTCTDADSVNAVMAKMSAGRFRHVPVTDD-GKVTGVISIGDVVKFKI 126


>gi|212711922|ref|ZP_03320050.1| hypothetical protein PROVALCAL_02997 [Providencia alcalifaciens DSM
           30120]
 gi|212685444|gb|EEB44972.1| hypothetical protein PROVALCAL_02997 [Providencia alcalifaciens DSM
           30120]
          Length = 281

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL +++ +L        + AV+ +   + ++   G G S  +     +    
Sbjct: 97  KIFESAMAGLDNVKHTLDTN---AINRAVDLLTQAR-KISFFGFGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              +  D+I+++S +G +  L  +   AR     +IAITSE 
Sbjct: 153 FNIPVIYFDDIVMQRMSCINSSEGDVIVLISHTGRTKALVDMAQLARHNDATVIAITSEG 212

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            S +A  A + + +    ++  +   P  S + QLA+ D L       R     D
Sbjct: 213 -SPLAKEASLSIIIDVPEDTDMY--MPMVSRMAQLAVIDVLTTGFTLRRGEKFRD 264


>gi|94269324|ref|ZP_01291432.1| CBS:Phosphoesterase, RecJ-like:Polynucleotide adenylyltransferase
           region:Phosphoesterase, DHHA1 [delta proteobacterium
           MLMS-1]
 gi|93451263|gb|EAT02156.1| CBS:Phosphoesterase, RecJ-like:Polynucleotide adenylyltransferase
           region:Phosphoesterase, DHHA1 [delta proteobacterium
           MLMS-1]
          Length = 881

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    + +A  +L+      + VVD   ++KG+I+     +     L    V D M    
Sbjct: 323 RPEISIGEAEELLNRYNITVLPVVDPEGRVKGLISRRVAGKAIQLGLKEQKVADYMSTEF 382

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLL 336
             +     L    +L+ +H   ++ VVD+   + +G++   DLL
Sbjct: 383 ATLPLTATLGDIQELIIEHRQRIIPVVDNRDGRLLGVITRTDLL 426



 Score = 56.4 bits (135), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 272 IFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +  HK +       D+M         +  +  A +LL ++NI+VL VVD   +  G++
Sbjct: 297 LLQVLHKQIRPQRGAADLMSAPVISARPEISIGEAEELLNRYNITVLPVVDPEGRVKGLI 356

Query: 331 HFL 333
              
Sbjct: 357 SRR 359



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIIT 268
           G  +           +       + +   L D   ++ E R   + VVD    +L G+IT
Sbjct: 362 GKAIQLGLKEQKVADYMSTEFATLPLTATLGDIQELIIEHRQRIIPVVDNRDGRLLGVIT 421

Query: 269 EGDIFRNFHKDLNTLS 284
             D+      D + L 
Sbjct: 422 RTDLLSLLVSDPSRLP 437


>gi|94266573|ref|ZP_01290257.1| CBS:Phosphoesterase, RecJ-like:Polynucleotide adenylyltransferase
           region:Phosphoesterase, DHHA1 [delta proteobacterium
           MLMS-1]
 gi|93452791|gb|EAT03323.1| CBS:Phosphoesterase, RecJ-like:Polynucleotide adenylyltransferase
           region:Phosphoesterase, DHHA1 [delta proteobacterium
           MLMS-1]
          Length = 881

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    + +A  +L+      + VVD   ++KG+I+     +     L    V D M    
Sbjct: 323 RPEISIGEAEELLNRYNITVLPVVDPEGRVKGLISRRVAGKAIQLGLKEQKVADYMSTEF 382

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLL 336
             +     L    +L+ +H   ++ VVD+   + +G++   DLL
Sbjct: 383 ATLPLTATLGDIQELIIEHRQRIIPVVDNRDGRLLGVITRTDLL 426



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 272 IFRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + +  HK +       D+M         +  +  A +LL ++NI+VL VVD   +  G++
Sbjct: 297 LLQVLHKQIRPQRGAADLMSAPVISARPEISIGEAEELLNRYNITVLPVVDPEGRVKGLI 356

Query: 331 HFL 333
              
Sbjct: 357 SRR 359



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 26/76 (34%), Gaps = 1/76 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIIT 268
           G  +           +       + +   L D   ++ E R   + VVD    +L G+IT
Sbjct: 362 GKAIQLGLKEQKVADYMSTEFATLPLTATLGDIQELIIEHRQRIIPVVDNRDGRLLGVIT 421

Query: 269 EGDIFRNFHKDLNTLS 284
             D+      D + L 
Sbjct: 422 RTDLLSLLVSDPSRLP 437


>gi|91788305|ref|YP_549257.1| inosine-5'-monophosphate dehydrogenase [Polaromonas sp. JS666]
 gi|91697530|gb|ABE44359.1| inosine-5'-monophosphate dehydrogenase [Polaromonas sp. JS666]
          Length = 489

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 59/167 (35%), Gaps = 7/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +               +
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGIVH-KNLTPQQQAAEVAKVKRYESGVLRDPVV 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     +   + +  +       V+D G ++ GI+T  D+      D+    V  +M   
Sbjct: 99  ITPTHTVRQVMALSEQLGISGFPVID-GGRVVGIVTGRDMRFESRMDV---PVSTIMTPR 154

Query: 293 --PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                I E   L  A  LL +H +  +++V+D  +  G++   D+ +
Sbjct: 155 DRLITISETASLADAKALLNKHRLERVLLVNDNFELKGLITVKDITK 201


>gi|116491502|ref|YP_811046.1| transcriptional regulator [Oenococcus oeni PSU-1]
 gi|116092227|gb|ABJ57381.1| Transcriptional regulator [Oenococcus oeni PSU-1]
          Length = 282

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 67/179 (37%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            + + Q   +   A    L++  +++  +        V+ + +   ++   GIG S  + 
Sbjct: 89  SDQSEQIVKKLFSAGIAALTATAANINMK---DLDRVVDWLVSS-NKIGFFGIGGSSIVA 144

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T          +        +T +DL IV+S SG + +   +    R    
Sbjct: 145 FNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTSEDLGIVISHSGRNQDTLLVENKLRENGS 204

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            ++AIT+  +S +A +ADIVL    E           +S + Q+ I D L   +    N
Sbjct: 205 KIVAITAFPESPIAKNADIVLNSYSEE--VNFRQESMSSLVAQITIIDTLFTLVGHRLN 261


>gi|296241946|ref|YP_003649433.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
 gi|296094530|gb|ADG90481.1| putative signal transduction protein with CBS domains
           [Thermosphaera aggregans DSM 11486]
          Length = 316

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 14/124 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
               + ++     L  A+  +  + F  + VVD G+ + G++T  D+ R F         
Sbjct: 184 MSTPVAVINRKSSLKKAMEEMITQGFRRLPVVD-GEVVVGMLTAVDVVRYFGSHEAFKRA 242

Query: 279 ------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +  ++  E++M +N   + ED  L  A+  +   N+S ++V D+     GIV  
Sbjct: 243 ITGNILEALSIPAEEIMSENLVTVREDEDLAKAVYEMLSRNVSSVLVTDEEGILKGIVTE 302

Query: 333 LDLL 336
            D+L
Sbjct: 303 RDVL 306



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-LS 284
               I  V     +ID +  ++    G V VV++   L+GI+TE D+       ++T L 
Sbjct: 120 MTRRIVQVPDTSKIIDVLQAMAVTGSGVVLVVNKEGGLEGIVTEHDMVVYLSGVVSTGLI 179

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+DVM     VI   + L  AM+ +       L VVD  +  +G++  +D++R+
Sbjct: 180 VKDVMSTPVAVINRKSSLKKAMEEMITQGFRRLPVVD-GEVVVGMLTAVDVVRY 232



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 188 ALAIALLESRNF-SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL 246
            +  A+   R F S   F     G  L  L + A ++M   +++  V+    L  A+  +
Sbjct: 222 GMLTAVDVVRYFGSHEAFKRAITGNILEALSIPAEEIM--SENLVTVREDEDLAKAVYEM 279

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +    V V DE   LKGI+TE D+    
Sbjct: 280 LSRNVSSVLVTDEEGILKGIVTERDVLYAL 309


>gi|294931343|ref|XP_002779843.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239889529|gb|EER11638.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 648

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/164 (24%), Positives = 67/164 (40%), Gaps = 10/164 (6%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEA 101
           L  ++      A+E I     R++I   G S H   IG  L   LA       +      
Sbjct: 310 LNTKVQGTEKTALETIANAD-RIIICACGTSWHSGLIGEYLIEQLARINVEVEYASE--- 365

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
                 ++T  D+I+ +S SG + +    +  A+  S   I I +   S +A   D  + 
Sbjct: 366 FRYRNPLLTPKDVIVAISQSGETADTLEAIRIAKSNSALSIGIVNCVGSTIARDTDAGIY 425

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           L   PE    G+A T +   Q+ +   LA++L   R   E+D++
Sbjct: 426 LHAGPE---IGVASTKAFTSQVMVLTLLALSLARKRGTIEDDYF 466


>gi|213403552|ref|XP_002172548.1| IMP dehydrogenase Gua1 [Schizosaccharomyces japonicus yFS275]
 gi|212000595|gb|EEB06255.1| IMP dehydrogenase Gua1 [Schizosaccharomyces japonicus yFS275]
          Length = 523

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 10/170 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            AP  S+ M     D +AI +           +          +        +   + P+
Sbjct: 69  KAPFMSSPMDTVTEDQMAIYMALLGGIGI--IHHNCTPEAQAEMVRRVKRYENGFITDPV 126

Query: 233 VK-IGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V  +   + + + I  ++ F  + V D      KL GI++  D+   F KD  +  V +V
Sbjct: 127 VFGVNNTIGEVLKIKKDRGFSGIPVTDNGKLNGKLLGIVSSRDV--QFRKD-PSTPVSEV 183

Query: 289 MIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M + N     +   L  A ++L++     L V+D   + + ++   DL++
Sbjct: 184 MTRENLVTAPKGIDLEGANEILKKSKKGKLPVIDGEGRLVALLSLTDLMK 233


>gi|144898777|emb|CAM75641.1| CBS domain protein [Magnetospirillum gryphiswaldense MSR-1]
          Length = 128

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/119 (19%), Positives = 50/119 (42%), Gaps = 4/119 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
           +   G  +  +  G  L +A  ++ ++  G +  VD    + GI++E D+ R+     + 
Sbjct: 7   LRDKGHEVHTIGSGASLHEAAGVMLDRNIGALLCVDGSGGIIGILSERDLTRSMAMHGHE 66

Query: 282 --TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +V   M ++      D  +   + ++ +     L VV    + IG+V   DL++ 
Sbjct: 67  AIDRTVSQCMNRDVIACRADDEVGNLLSIMTETRCRHLPVV-HEGRVIGLVSIGDLIKA 124


>gi|88706902|ref|ZP_01104601.1| Inosine-5'-monophosphate dehydrogenase [Congregibacter litoralis
           KT71]
 gi|88698824|gb|EAQ95944.1| Inosine-5'-monophosphate dehydrogenase [Congregibacter litoralis
           KT71]
          Length = 490

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 58/170 (34%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +            +     ++  +    S V+      
Sbjct: 41  NLPLVSAAMDTVTEARLAIAMAQEGGIGIIHKSMGIAEQAAEVLRVKKYESGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    L   I + S      V V+  G+ L GI+T  D+      D     V  +M 
Sbjct: 98  ITIQQDATLAQLIELTSANGISGVPVL-AGEDLVGIVTRRDMRFETEMD---KPVASLMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E        +LL QH I  ++VVDD     G++   D  + 
Sbjct: 154 PRDKLVTVNEGADSAEVQRLLHQHRIEKILVVDDNFDLRGMITVKDFDKA 203


>gi|317491795|ref|ZP_07950230.1| rpiR family Helix-turn-helix domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
 gi|316920229|gb|EFV41553.1| rpiR family Helix-turn-helix domain-containing protein
           [Enterobacteriaceae bacterium 9_2_54FAA]
          Length = 289

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SLE +         + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLEMAKNNLDMSAVNRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVVYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  + + AR     +IAITS   + +A  A
Sbjct: 161 DDIVMQRMSCMNSNEGDVVVLISHTGRTKSLVEMAHLARENDATVIAITSR-DTPLALEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + L L    ++  +   P  S I QL + DALA      R     D
Sbjct: 220 TLPLLLDVPEDTDVY--MPMVSRIAQLTLIDALATGFTLRRGAKFRD 264


>gi|171060004|ref|YP_001792353.1| bifunctional glucokinase/RpiR family transcriptional regulator
           [Leptothrix cholodnii SP-6]
 gi|170777449|gb|ACB35588.1| glucokinase [Leptothrix cholodnii SP-6]
          Length = 616

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 67/172 (38%), Gaps = 4/172 (2%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A R        +S+L           F  AV+ +   + R+ + G+G +     +    
Sbjct: 425 TAERMATILNNSISALIELRDRLHPQAFEQAVKLLANAR-RIEVYGVGAAALAAEEAQHK 483

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G        ++  +     +  DD+++VLS SG+ D +   +  ARR    +I + 
Sbjct: 484 FGRLGLQVVARTDSQLQNVTAAFLGPDDVLLVLSNSGAVDPVNEAVMRARRSGTRVIGMC 543

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
              +S +A  +D++L  P +       L P  S +MQ  I D L   L   R
Sbjct: 544 P-QRSDLARLSDVIL--PVDHPEDLQALVPMVSRLMQTVIVDVLVTDLALQR 592


>gi|13542143|ref|NP_111831.1| CBS domain-containing protein [Thermoplasma volcanium GSS1]
          Length = 176

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 55/124 (44%), Gaps = 5/124 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF- 276
           +    +M++      V     + DA+ I++E R   + V D   K  G+I+E  I + F 
Sbjct: 1   MRVEKIMNTNYRS--VNENSSVFDAVKIMNENRLYGLIVKDNEGKDVGLISERSIIKRFI 58

Query: 277 --HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             +K  + + ++ VM K    +     +  A   L ++ +    VVD   K +GI+   D
Sbjct: 59  PRNKKPDEVQIKYVMRKPIPKVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTD 118

Query: 335 LLRF 338
           L R+
Sbjct: 119 LSRY 122



 Score = 42.6 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 23/59 (38%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                     IP V     + DA   LSE      AVVD   K+ GIIT  D+ R   +
Sbjct: 67  VQIKYVMRKPIPKVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTDLSRYLSR 125


>gi|332366591|gb|EGJ44335.1| CBS domain protein [Streptococcus sanguinis SK1059]
          Length = 212

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDEDNVRKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|254501649|ref|ZP_05113800.1| transcriptional regulator, RpiR family protein [Labrenzia
           alexandrii DFL-11]
 gi|222437720|gb|EEE44399.1| transcriptional regulator, RpiR family protein [Labrenzia
           alexandrii DFL-11]
          Length = 320

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFF 95
            L +   +L+ ++      A + +     +++  GIG  S  I  + A+     G PSF 
Sbjct: 133 ALYASVDTLRRQVDANMLDAAKDVILNTRQILFAGIGGGSSMITQEAANRFFRLGIPSFH 192

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V  +         +   D + ++S SG +D +      A  +    I IT +  + +A  
Sbjct: 193 VSDSYLLQMRAATLGPGDTLFLVSASGEADAIVGAAEIANGYGATTICIT-KPNTRLAAA 251

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           A I + +    +       PT S  + L + DALA A+ + 
Sbjct: 252 AKIQILIDVPEDRAIFK--PTASRYVHLVVIDALATAVAQE 290


>gi|11498858|ref|NP_070087.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
           fulgidus DSM 4304]
 gi|2649320|gb|AAB89984.1| inosine monophosphate dehydrogenase, putative [Archaeoglobus
           fulgidus DSM 4304]
          Length = 259

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +      +   ++  +K    + DAI ++ +       VVD+  ++ G I+  D+     
Sbjct: 1   MSIKVKDYMTKNVYTLKPDNTVKDAIELVRKTGHDSFPVVDDNMRVVGYISAVDLL---- 56

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  + D+M +   V  +   L  A +++ +   S L VVD+  + +GI+   D++R
Sbjct: 57  DKSPETKIRDIMSRELYVARDFMDLRDAARVMFRTGHSKLPVVDEDNRLVGIISNADVIR 116



 Score = 39.5 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           L DA  ++       + VVDE  +L GII+  D+ R+  + ++   VE
Sbjct: 81  LRDAARVMFRTGHSKLPVVDEDNRLVGIISNADVIRSQIEKVDPDKVE 128


>gi|325914102|ref|ZP_08176455.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas vesicatoria ATCC 35937]
 gi|325539605|gb|EGD11248.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Xanthomonas vesicatoria ATCC 35937]
          Length = 135

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/98 (24%), Positives = 45/98 (45%), Gaps = 5/98 (5%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDT 300
            +++E+  G V V+D G++L GI++E D  R      +   T SV ++M      +    
Sbjct: 22  RLMAERGIGAVLVMD-GERLVGIVSERDYARKVVLRDRSSATTSVAEIMSSQVVTVSPSE 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   MQL+       L VV +  +   ++   DL++ 
Sbjct: 81  TVERCMQLMTDGRFRHLPVV-ENGRVQSVISIGDLVKA 117


>gi|46199411|ref|YP_005078.1| hypothetical protein TTC1109 [Thermus thermophilus HB27]
 gi|55981442|ref|YP_144739.1| hypothetical protein TTHA1473 [Thermus thermophilus HB8]
 gi|46197036|gb|AAS81451.1| conserved hypothetical protein [Thermus thermophilus HB27]
 gi|55772855|dbj|BAD71296.1| conserved hypothetical protein [Thermus thermophilus HB8]
          Length = 150

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII------------------ 267
                 ++     L +A   + E R+G   VVD   +L G++                  
Sbjct: 7   MTQDPVVLGPEATLEEAARRILETRYGGFPVVDGEGRLLGVVQVEELLPHPENVPFSDVE 66

Query: 268 --------TEGDIFRNFHKDLNTLSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                    + D     ++      V+ VM  + PK +  +  L  A++++   ++  L 
Sbjct: 67  ALQLFGEWVDEDALAEIYRRYQRTPVKAVMRTEIPK-VHPEDPLGKALKVVLTTDLRHLP 125

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD+  K +GI+   D L+ 
Sbjct: 126 VVDEEGKVVGILTRSDFLKL 145



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M ++P V+  +  L  A + + +       VVD   + +G+V   +LL
Sbjct: 1   MKVKDLMTQDPVVLGPEATLEEAARRILETRYGGFPVVDGEGRLLGVVQVEELL 54



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 23/62 (37%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
             +            IP V    PL  A+ ++       + VVDE  K+ GI+T  D  +
Sbjct: 85  RRYQRTPVKAVMRTEIPKVHPEDPLGKALKVVLTTDLRHLPVVDEEGKVVGILTRSDFLK 144

Query: 275 NF 276
             
Sbjct: 145 LI 146


>gi|321314016|ref|YP_004206303.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis BSn5]
 gi|320020290|gb|ADV95276.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis BSn5]
          Length = 185

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 67/180 (37%), Gaps = 12/180 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L+ L  S     + +     + I +   ++   G G+SG +    A  L   G  + 
Sbjct: 8   AEILNELHRSAAYISNEEADQLADHILSSH-QIFTAGAGRSGLMAKSFAMRLMHMGFNAH 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   DL+I+ S SG +  L      A+     + A+T   +S +  
Sbjct: 67  IVGEILTPP-----LAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGK 121

Query: 155 HADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            AD+++ +P  P+   +G    + P  S   Q      DA+ + L+E +       +  H
Sbjct: 122 QADLIIRMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKKGLDSETMFTHH 181


>gi|300811875|ref|ZP_07092338.1| SIS domain protein [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
 gi|300497143|gb|EFK32202.1| SIS domain protein [Lactobacillus delbrueckii subsp. bulgaricus
           PB2003/044-T3-4]
          Length = 279

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/196 (17%), Positives = 74/196 (37%), Gaps = 6/196 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +    +  KS      SL ++  V  AL  I A K     ++ +++   +      ++ +
Sbjct: 70  LKVSLARVKSPISSLASLNQDD-VSQALDQIAASKE--DEIDRTIRRLPAAILKEVLDLL 126

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +  +  + +   G +  +       L   G  +      EA  G    ++  D + ++S 
Sbjct: 127 ENSR-LIQVAAEGDTYPVAEDAVYKLNQLGLLAISSPTMEAVIGQTMNMSSSDCLWLISN 185

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG S  L  +   A+   I ++A+T+   S +A  +D  LT                S +
Sbjct: 186 SGESFGLLKLADLAKEKGIKVVAMTNRPDSPLAAKSDYHLTTAIGQTVLQEEYLF--SRL 243

Query: 181 MQLAIGDALAIALLES 196
              ++ +A+ + LL  
Sbjct: 244 ASSSLVEAIFLLLLNR 259


>gi|260909815|ref|ZP_05916507.1| glucosamine-fructose-6-phosphate aminotransferase [Prevotella sp.
           oral taxon 472 str. F0295]
 gi|260636046|gb|EEX54044.1| glucosamine-fructose-6-phosphate aminotransferase [Prevotella sp.
           oral taxon 472 str. F0295]
          Length = 356

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/170 (25%), Positives = 70/170 (41%), Gaps = 7/170 (4%)

Query: 31  IIAEKRGLSS-LESSLQGELSFQFHCAVEKIKAIKGR-VVITGIGKSGHIGSKLASTLAS 88
           I+ +   + + L      E         E I     R VV TG+G S  I S  AS    
Sbjct: 12  ILEQPAAIGNILHFYTAPEGLELLRKIKEAIAQRNVRDVVFTGMGSSFFISSAAASLFNQ 71

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  + +++ +E  H +L ++ R  L++  S SG S E+K IL      S+  + I +E 
Sbjct: 72  QGIHAHYINTSELLHYNLSLLNRPTLLVCASQSGESYEIKEILERL-PQSVFCVGIVNEE 130

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            S +A  AD+ L      E     +  T + ++       L + L +  N
Sbjct: 131 DSALAHKADVALLCKGGREE----MTSTKTYVLTSLAACILGLYLSDRWN 176


>gi|257888613|ref|ZP_05668266.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,141,733]
 gi|293378701|ref|ZP_06624859.1| transcriptional regulator, RpiR family [Enterococcus faecium PC4.1]
 gi|257824667|gb|EEV51599.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,141,733]
 gi|292642629|gb|EFF60781.1| transcriptional regulator, RpiR family [Enterococcus faecium PC4.1]
          Length = 282

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE ++  +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLETAES-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKNMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSLLAQFATIDII 252


>gi|311746125|ref|ZP_07719910.1| polyA polymerase family protein [Algoriphagus sp. PR1]
 gi|126576346|gb|EAZ80624.1| polyA polymerase family protein [Algoriphagus sp. PR1]
          Length = 153

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 9/132 (6%)

Query: 215 TLFVCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                A  ++    S  LV       +   + +L++++     VVDE   L GII+E D 
Sbjct: 14  KKSPAAPILVKDHMSTKLVTFLPDDTIDMVLEVLTKRKISGAPVVDESGSLVGIISEVDC 73

Query: 273 FRNFHKDLNTLS------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            +   K   T +      V+D M  +   +  +  +  A Q   +  I    V+      
Sbjct: 74  LKEIIKGKYTNTPKFPGKVKDHMSVDVITLGPELSIFDAAQKFLELKIRRFPVI-RDGSL 132

Query: 327 IGIVHFLDLLRF 338
           IG +   D++R 
Sbjct: 133 IGQISLSDIIRA 144


>gi|62182100|ref|YP_218517.1| protein rpiR [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|62129733|gb|AAX67436.1| Protein rpiR [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. SC-B67]
 gi|322716588|gb|EFZ08159.1| protein rpiR [Salmonella enterica subsp. enterica serovar
           Choleraesuis str. A50]
          Length = 293

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 7/184 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            V       ++       L SI+A +  L+ ++ S+   +++ F       K  + ++ I
Sbjct: 91  PVIPDSEGFIEKIFESTLLNSILALQEALNVIDCSIIKSVAWLFIH-----KNAEAKIFI 145

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G S  I       L   G  S     +        ++ + D+++ +S SG + ++  
Sbjct: 146 AGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILLAVSHSGQTSDIIQ 205

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  A       I +T+   S ++      +    +        A  T+ I+ L I DA+
Sbjct: 206 MVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENA--TTRIVHLNILDAI 263

Query: 190 AIAL 193
              +
Sbjct: 264 FTII 267


>gi|303242318|ref|ZP_07328804.1| CBS domain containing protein [Acetivibrio cellulolyticus CD2]
 gi|302590157|gb|EFL59919.1| CBS domain containing protein [Acetivibrio cellulolyticus CD2]
          Length = 879

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V     + +A  I+ +     + VV  G K+ GII+  DI +          V
Sbjct: 314 MSSPVKTVPEDTTIDEAYDIMIKFGHSGMPVV-SGNKIAGIISRRDIDKARVHGYGQSPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  M K    I     +    +L  +H+I  L V+    + IGIV   D++R
Sbjct: 373 KGYMSKKVVTIDFKEPIKEVRELFAEHDIGRLPVL-KDNEMIGIVTRTDVIR 423



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +D+M    K + EDT +  A  ++ +   S + VV    K  GI+   D+ +  +
Sbjct: 309 MAKDIMSSPVKTVPEDTTIDEAYDIMIKFGHSGMPVV-SGNKIAGIISRRDIDKARV 364


>gi|294627296|ref|ZP_06705882.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
 gi|292598378|gb|EFF42529.1| conserved hypothetical protein [Xanthomonas fuscans subsp.
           aurantifolii str. ICPB 11122]
          Length = 119

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKV 295
           +I+AI +++EK  G V V+D G +L GI++E D         +  +T SV ++       
Sbjct: 1   MIEAIRLMAEKAVGAVLVMD-GPRLVGIVSERDYAHKVVLRDRSSSTTSVAEITSAEVVT 59

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +     +   MQL+       L VV +  +  G++   DL++ 
Sbjct: 60  VSPSDTVERCMQLMTDGRFRHLPVV-ENGRVQGVISIGDLVKA 101



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 15/77 (19%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE D+   H            S    +   +  V     +   + ++++ RF  + VV E
Sbjct: 29  SERDYA--HKVVLRDRSSSTTSVAEITSAEVVTVSPSDTVERCMQLMTDGRFRHLPVV-E 85

Query: 260 GQKLKGIITEGDIFRNF 276
             +++G+I+ GD+ +  
Sbjct: 86  NGRVQGVISIGDLVKAV 102


>gi|116333105|ref|YP_794632.1| sugar phosphate isomerase [Lactobacillus brevis ATCC 367]
 gi|116098452|gb|ABJ63601.1| hexulose-6-phosphate isomerase [Lactobacillus brevis ATCC 367]
          Length = 180

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 60/178 (33%), Gaps = 9/178 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++   + + G +        EK+     R+ + G G+SG +    A  L   G   F
Sbjct: 4   IDQVTQEVNEVMGMIDESQLDQAEKLIQKDRRIFVLGAGRSGLMAKGFAMRLMHIGYTVF 63

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +            I   D+++ +S SG +  +  +   A    + +IA+TS   S +  
Sbjct: 64  VIGETITP-----SIQAGDVLLAVSGSGKTASILELAEKAAASGVTVIAVTSHVDSPLGK 118

Query: 155 HADIVLTLPKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
               V+ +P   ++        L  T          D L + L      S +     H
Sbjct: 119 VGPAVIVVPGATKTGDGVKSIQLLSTLFDQSVHLTLDVLCLKLSRRDKVSNDAAAATH 176


>gi|269102396|ref|ZP_06155093.1| transcriptional regulator [Photobacterium damselae subsp. damselae
           CIP 102761]
 gi|268162294|gb|EEZ40790.1| transcriptional regulator [Photobacterium damselae subsp. damselae
           CIP 102761]
          Length = 284

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 55/148 (37%), Gaps = 4/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            Q + AV+ +   K ++   G+G S  +     +       P             +   +
Sbjct: 116 QQVNRAVDLLTQAK-KISFFGLGASAAVAHDAQNKFFRFNIPIVCFDDIVMQRMSVINCS 174

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+++V+S +G +  L  I   AR     +I IT E  S +     + +      ++  
Sbjct: 175 DGDVVVVISHTGRTKNLVEIARMARENGATVIGIT-EKDSPLERECSLSICPDVPEDTDI 233

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
           +   P  S ++Q+ I D LA      R 
Sbjct: 234 Y--MPMASRVVQMTIIDVLATGFTLRRG 259


>gi|15612744|ref|NP_241047.1| hypothetical protein BH0181 [Bacillus halodurans C-125]
 gi|10172793|dbj|BAB03900.1| BH0181 [Bacillus halodurans C-125]
          Length = 241

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 80/195 (41%), Gaps = 13/195 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS FK   +      K + ++ +  +I          E + +G+L  +   A   +   +
Sbjct: 59  FSEFKVKLKMHLEKEKKAPIKSSQHAIA------EFFERAFRGDLEERISEAAALVADAE 112

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA-AEASHGDLGMITRDDLIIVLSWSGS 123
             V+  GIG SG +    A   ++ G  S ++   +   H  L    ++ + I LS SG 
Sbjct: 113 N-VIFIGIGSSGILAEYGARYFSALGKLSMYIKDFSYPIHSKL---RQNSVTIALSVSGE 168

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +      +   ++    +I+IT+   S +A  AD+ L+     E      A  T+ +  +
Sbjct: 169 THFTITQVNQLKQEGSKIISITNNKFSTIAKVADVNLSYYVSEEF--FEKANITTQVPVV 226

Query: 184 AIGDALAIALLESRN 198
            I +A+A  L + + 
Sbjct: 227 YILEAMARELYKLQG 241


>gi|89110811|ref|AP_004591.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
           substr. W3110]
 gi|90111685|ref|NP_418513.4| DNA-binding transcriptional repressor [Escherichia coli str. K-12
           substr. MG1655]
 gi|110644447|ref|YP_672177.1| DNA-binding transcriptional repressor RpiR [Escherichia coli 536]
 gi|161486022|ref|NP_756946.2| DNA-binding transcriptional repressor RpiR [Escherichia coli
           CFT073]
 gi|162138310|ref|YP_543623.2| DNA-binding transcriptional repressor RpiR [Escherichia coli UTI89]
 gi|170021911|ref|YP_001726865.1| DNA-binding transcriptional repressor RpiR [Escherichia coli ATCC
           8739]
 gi|170083543|ref|YP_001732863.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
           substr. DH10B]
 gi|170681425|ref|YP_001746483.1| DNA-binding transcriptional repressor RpiR [Escherichia coli
           SMS-3-5]
 gi|188493126|ref|ZP_03000396.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli 53638]
 gi|191168759|ref|ZP_03030536.1| HTH-type transcriptional regulator RpiR [Escherichia coli B7A]
 gi|191172026|ref|ZP_03033571.1| HTH-type transcriptional regulator RpiR [Escherichia coli F11]
 gi|209921578|ref|YP_002295662.1| DNA-binding transcriptional repressor RpiR [Escherichia coli SE11]
 gi|215489440|ref|YP_002331871.1| DNA-binding transcriptional repressor RpiR [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218561179|ref|YP_002394092.1| DNA-binding transcriptional repressor RpiR [Escherichia coli S88]
 gi|218692386|ref|YP_002400598.1| DNA-binding transcriptional repressor RpiR [Escherichia coli ED1a]
 gi|218702755|ref|YP_002410384.1| DNA-binding transcriptional repressor RpiR [Escherichia coli IAI39]
 gi|227886872|ref|ZP_04004677.1| RpiR family transcriptional regulator [Escherichia coli 83972]
 gi|238903199|ref|YP_002928995.1| DNA-binding transcriptional repressor [Escherichia coli BW2952]
 gi|254164024|ref|YP_003047132.1| DNA-binding transcriptional repressor RpiR [Escherichia coli B str.
           REL606]
 gi|256024965|ref|ZP_05438830.1| DNA-binding transcriptional repressor RpiR [Escherichia sp.
           4_1_40B]
 gi|300906415|ref|ZP_07124113.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300938238|ref|ZP_07153005.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300946680|ref|ZP_07160937.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300957482|ref|ZP_07169694.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300988452|ref|ZP_07178690.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|300994975|ref|ZP_07180999.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|301047692|ref|ZP_07194754.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|301302785|ref|ZP_07208914.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|301644104|ref|ZP_07244115.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|306815777|ref|ZP_07449926.1| DNA-binding transcriptional repressor RpiR [Escherichia coli NC101]
 gi|307140782|ref|ZP_07500138.1| DNA-binding transcriptional repressor RpiR [Escherichia coli H736]
 gi|309795902|ref|ZP_07690316.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|312965707|ref|ZP_07779936.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|312974109|ref|ZP_07788280.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1827-70]
 gi|331660679|ref|ZP_08361611.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli TA206]
 gi|82583679|sp|P0ACS8|RPIR_ECOL6 RecName: Full=HTH-type transcriptional regulator rpiR; AltName:
           Full=Als operon repressor
 gi|82583680|sp|P0ACS7|RPIR_ECOLI RecName: Full=HTH-type transcriptional regulator rpiR; AltName:
           Full=Als operon repressor
 gi|1197466|emb|CAA57687.1| rpiR [Escherichia coli]
 gi|85676842|dbj|BAE78092.1| DNA-binding transcriptional repressor [Escherichia coli str. K12
           substr. W3110]
 gi|87082369|gb|AAC77050.2| DNA-binding transcriptional repressor [Escherichia coli str. K-12
           substr. MG1655]
 gi|110346039|gb|ABG72276.1| protein RpiR [Escherichia coli 536]
 gi|169756839|gb|ACA79538.1| transcriptional regulator, RpiR family [Escherichia coli ATCC 8739]
 gi|169891378|gb|ACB05085.1| DNA-binding transcriptional repressor [Escherichia coli str. K-12
           substr. DH10B]
 gi|170519143|gb|ACB17321.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli SMS-3-5]
 gi|188488325|gb|EDU63428.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli 53638]
 gi|190901186|gb|EDV60958.1| HTH-type transcriptional regulator RpiR [Escherichia coli B7A]
 gi|190907791|gb|EDV67385.1| HTH-type transcriptional regulator RpiR [Escherichia coli F11]
 gi|209914837|dbj|BAG79911.1| transcriptional regulator [Escherichia coli SE11]
 gi|215267512|emb|CAS11966.1| DNA-binding transcriptional repressor [Escherichia coli O127:H6
           str. E2348/69]
 gi|218367948|emb|CAR05748.1| DNA-binding transcriptional repressor [Escherichia coli S88]
 gi|218372741|emb|CAR20618.1| DNA-binding transcriptional repressor [Escherichia coli IAI39]
 gi|218429950|emb|CAR10928.2| DNA-binding transcriptional repressor [Escherichia coli ED1a]
 gi|222035818|emb|CAP78563.1| HTH-type transcriptional regulator rpiR [Escherichia coli LF82]
 gi|227836214|gb|EEJ46680.1| RpiR family transcriptional regulator [Escherichia coli 83972]
 gi|238860970|gb|ACR62968.1| DNA-binding transcriptional repressor [Escherichia coli BW2952]
 gi|253975925|gb|ACT41596.1| DNA-binding transcriptional repressor [Escherichia coli B str.
           REL606]
 gi|260451080|gb|ACX41502.1| transcriptional regulator, RpiR family [Escherichia coli DH1]
 gi|281181180|dbj|BAI57510.1| transcriptional regulator [Escherichia coli SE15]
 gi|300300438|gb|EFJ56823.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|300304872|gb|EFJ59392.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|300315792|gb|EFJ65576.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300401863|gb|EFJ85401.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300407450|gb|EFJ90988.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|300453659|gb|EFK17279.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300456782|gb|EFK20275.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300842005|gb|EFK69765.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|301077543|gb|EFK92349.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|305851439|gb|EFM51894.1| DNA-binding transcriptional repressor RpiR [Escherichia coli NC101]
 gi|307556260|gb|ADN49035.1| transcriptional repressor of ribose catabolism RpiR/YebK family
           [Escherichia coli ABU 83972]
 gi|307629160|gb|ADN73464.1| DNA-binding transcriptional repressor RpiR [Escherichia coli UM146]
 gi|308120563|gb|EFO57825.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|309704558|emb|CBJ03907.1| DNA-binding transcriptional repressor [Escherichia coli ETEC
           H10407]
 gi|310331643|gb|EFP98899.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1827-70]
 gi|312289681|gb|EFR17572.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|312948684|gb|ADR29511.1| DNA-binding transcriptional repressor RpiR [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315138645|dbj|BAJ45804.1| rpiR protein [Escherichia coli DH1]
 gi|315253771|gb|EFU33739.1| transcriptional regulator, RpiR family [Escherichia coli MS 85-1]
 gi|315287883|gb|EFU47285.1| transcriptional regulator, RpiR family [Escherichia coli MS 110-3]
 gi|315293995|gb|EFU53347.1| transcriptional regulator, RpiR family [Escherichia coli MS 153-1]
 gi|315296104|gb|EFU55413.1| transcriptional regulator, RpiR family [Escherichia coli MS 16-3]
 gi|323190028|gb|EFZ75306.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           RN587/1]
 gi|323380522|gb|ADX52790.1| transcriptional regulator, RpiR family [Escherichia coli KO11]
 gi|323935499|gb|EGB31832.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1520]
 gi|323940275|gb|EGB36468.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E482]
 gi|323950344|gb|EGB46225.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H252]
 gi|323954424|gb|EGB50208.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H263]
 gi|324008667|gb|EGB77886.1| transcriptional regulator, RpiR family [Escherichia coli MS 57-2]
 gi|324015798|gb|EGB85017.1| transcriptional regulator, RpiR family [Escherichia coli MS 60-1]
 gi|324017179|gb|EGB86398.1| transcriptional regulator, RpiR family [Escherichia coli MS 117-3]
 gi|330908427|gb|EGH36946.1| transcriptional regulator of D-allose utilization, RpiR family
           [Escherichia coli AA86]
 gi|331051721|gb|EGI23760.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli TA206]
 gi|332346097|gb|AEE59431.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 296

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R  + G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQR-DLYGAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|329941417|ref|ZP_08290696.1| RpiR family transcriptional regulator [Streptomyces
           griseoaurantiacus M045]
 gi|329299948|gb|EGG43847.1| RpiR family transcriptional regulator [Streptomyces
           griseoaurantiacus M045]
          Length = 317

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/163 (23%), Positives = 64/163 (39%), Gaps = 5/163 (3%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E++ L+   + L          A     A   R+ + G+G SG +   L   L   G  +
Sbjct: 132 ERQTLADTAAGLDTAQLGAAVAA----LAAARRIDVYGVGASGLVAQDLTQKLLRIGLMA 187

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                   +  +  ++   D+ + ++ SGS+ ++   L  A       IAIT      VA
Sbjct: 188 QAHSDPHLAVTNAVLLRAKDVAVAITHSGSTGDVIEPLRVAFERGATTIAITGRPGGPVA 247

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +AD +LT     ES     A  +S   QL + D L I + + 
Sbjct: 248 QYADHILTTSTARESE-LRPAAMSSRTSQLLVVDCLFIGVAQR 289


>gi|320193468|gb|EFW68105.1| Transcriptional regulator of D-allose utilization, RpiR family
           [Escherichia coli WV_060327]
          Length = 296

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R +  G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQRDLY-GAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|320012127|gb|ADW06977.1| transport-associated protein [Streptomyces flavogriseus ATCC 33331]
          Length = 224

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 18/123 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------------FR 274
           V +     + +  +++ +   V V++   ++ G+I+E D+                    
Sbjct: 20  VGLDARFKEIVAAMNQWQVTAVPVLEGEGRVVGVISEADLLLKEELRGEDATMIGQGERL 79

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             H     ++  D+M      +  D  L  A +L+ +H +  L VVD+     GIV  +D
Sbjct: 80  TDHAKAGAVTARDLMSSPAVTVATDAPLPEAARLMARHRVKRLPVVDERGVLKGIVSRID 139

Query: 335 LLR 337
           +L+
Sbjct: 140 VLK 142



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM +    +  D      +  + Q  ++ + V++   + +G++   DLL
Sbjct: 9   VKDVMTQTVVAVGLDARFKEIVAAMNQWQVTAVPVLEGEGRVVGVISEADLL 60



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 17/63 (26%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V    PL +A  +++  R   + VVDE   LKGI++  D+ + F +  + L  
Sbjct: 94  MSSPAVTVATDAPLPEAARLMARHRVKRLPVVDERGVLKGIVSRIDVLKVFLRTDDDL-A 152

Query: 286 EDV 288
           ++V
Sbjct: 153 DEV 155


>gi|193062971|ref|ZP_03044063.1| HTH-type transcriptional regulator RpiR [Escherichia coli E22]
 gi|194426789|ref|ZP_03059342.1| HTH-type transcriptional regulator RpiR [Escherichia coli B171]
 gi|260846885|ref|YP_003224663.1| transcriptional repressor [Escherichia coli O103:H2 str. 12009]
 gi|192931230|gb|EDV83832.1| HTH-type transcriptional regulator RpiR [Escherichia coli E22]
 gi|194415125|gb|EDX31394.1| HTH-type transcriptional regulator RpiR [Escherichia coli B171]
 gi|257762032|dbj|BAI33529.1| transcriptional repressor [Escherichia coli O103:H2 str. 12009]
 gi|323162149|gb|EFZ48015.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           E128010]
          Length = 296

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R +  G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQRDLY-GAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|319790005|ref|YP_004151638.1| Cl- channel voltage-gated family protein [Thermovibrio ammonificans
           HB-1]
 gi|317114507|gb|ADU96997.1| Cl- channel voltage-gated family protein [Thermovibrio ammonificans
           HB-1]
          Length = 580

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 78/195 (40%), Gaps = 10/195 (5%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           A  + IVL             A  +  + Q   G+   I   + RN  E+    +H    
Sbjct: 390 APLSTIVLVAEMTQGYNVLPYALISMTLAQNLAGNERTIFYYQKRNRLESP---VHKDEL 446

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
              +   A        ++  +    P+I A  I++++    + +V  G+K+ GI+T  D+
Sbjct: 447 KAYILKTAKVKDVMTTNVITLTPEDPVIKAKEIMAKRFIAGIPIVI-GKKVVGIVTTSDV 505

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIV 330
            +   + +    V+++M   P+ +L D  L   M++          VV D    + +GI+
Sbjct: 506 LKVEPEKMKETKVKEIMTPKPRCVLPDWDLLEVMRIFTSEGYGRAPVVKDFESMELVGII 565

Query: 331 HFLD----LLRFGII 341
              D    L++ G++
Sbjct: 566 SRSDIARYLVKRGVV 580


>gi|284051959|ref|ZP_06382169.1| two-component hybrid sensor and regulator [Arthrospira platensis
           str. Paraca]
          Length = 741

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/176 (17%), Positives = 70/176 (39%), Gaps = 23/176 (13%)

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI 235
              +   + + D + + +L  R+            G           ++    +  ++ +
Sbjct: 15  EARSTCVIVLQDLMVVGILTQRDI----------VGLAAQQQNLGQLLIEEVMTPSVITL 64

Query: 236 GCP-LIDAITILS---EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLS-VEDVM 289
               L D++TI++   + R   + +VD+  +L G++T   + +     DL  L  V +VM
Sbjct: 65  RESELTDSLTIINLLQKHRIRHLPIVDDSDRLVGLVTHESLRKLMRPIDLLRLRLVSEVM 124

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-------KAIGIVHFLDLLRF 338
            +N      D  +    +L+ +  +S +++ +            +GI+   DLL+F
Sbjct: 125 TRNVVSANCDQTMLEIARLMSERRVSCVVIAETQGDADHAMQIPLGILTERDLLQF 180



 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 15/102 (14%)

Query: 254 VAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLL 309
             +V +   + GI+T+ DI       ++L  L +E+VM  +   + E  L      + LL
Sbjct: 20  CVIVLQDLMVVGILTQRDIVGLAAQQQNLGQLLIEEVMTPSVITLRESELTDSLTIINLL 79

Query: 310 RQHNISVLMVVDDCQKAIGIVHFL----------DLLRFGII 341
           ++H I  L +VDD  + +G+V             DLLR  ++
Sbjct: 80  QKHRIRHLPIVDDSDRLVGLVT-HESLRKLMRPIDLLRLRLV 120



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 9/113 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQK-------LKGIITEGDIFR--NFHKDLNTLS 284
                +++   ++SE+R  CV + +             GI+TE D+ +  +   +   + 
Sbjct: 132 NCDQTMLEIARLMSERRVSCVVIAETQGDADHAMQIPLGILTERDLLQFQSLGLNWENIR 191

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++M      I  +  L    QL+ Q  I   +V  +  + +GIV    LL+
Sbjct: 192 ASNMMSSPLFTIRLEENLWQVQQLMEQRRIGRGIVTGERGELLGIVTQTSLLQ 244


>gi|254429618|ref|ZP_05043325.1| hypothetical protein ADG881_2848 [Alcanivorax sp. DG881]
 gi|196195787|gb|EDX90746.1| hypothetical protein ADG881_2848 [Alcanivorax sp. DG881]
          Length = 150

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 7/141 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQ 261
              + P        +  S  +    S  LV       + +AI +L E +     VVD+  
Sbjct: 1   MAGMMPATTAQGRIMLKSMHVAEYMSRRLVTFSPDMSVSEAIRVLLENQISGGPVVDDTG 60

Query: 262 KLKGIITEGDIFR-NFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           ++ G+ +E D  +       +     SV++ M  + + +     +    ++    +   L
Sbjct: 61  RVVGVFSESDCLKGALEASYHGTEIGSVKEYMSVDLQTVEGSDSILDVAEIFLADHRRRL 120

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+D+  K IG +   DLLR 
Sbjct: 121 PVLDN-GKLIGQISRRDLLRA 140


>gi|91978480|ref|YP_571139.1| hypothetical protein RPD_4019 [Rhodopseudomonas palustris BisB5]
 gi|91684936|gb|ABE41238.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 339

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 49/139 (35%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKD 279
               I  V+   P+      L +     V VVDE     G+I+EGD+       R   +D
Sbjct: 7   MTTDIVTVRPDAPVRAVAEKLLKHGVSAVPVVDEHGAPLGVISEGDLMPRNETAREARRD 66

Query: 280 L---------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                 +  +   +M+     + E   L     +L ++ I  + 
Sbjct: 67  WWLQLLSQGSEVHPDYLQFLKSDHRTAAQIMVSPVVTVDEGVSLGEIADILFENKIKRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+ +  + +GIV   DLL+
Sbjct: 127 VLRE-GRVVGIVSRADLLK 144



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM  +   +  D  +    + L +H +S + VVD+    +G++   DL+
Sbjct: 1   MKAADVMTTDIVTVRPDAPVRAVAEKLLKHGVSAVPVVDEHGAPLGVISEGDLM 54


>gi|327401863|ref|YP_004342702.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327317371|gb|AEA47987.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 295

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 54/112 (48%), Gaps = 2/112 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H    I  V     + +A  +L+E    C  V  EG+   G++    + +    ++    
Sbjct: 177 HMSSPIITVDADQTVREAAKVLAEHTIHCAPVK-EGEAFVGLLGLIQVAKALANNILDRP 235

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++VM+    ++ ++T +  A++++R  ++ +L+V D   + +G++    +L
Sbjct: 236 VKEVMVPKVVLVEKNTKIREALRIMRDESVRILIVTD-SGEPVGVITAHKIL 286



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 26/60 (43%), Gaps = 3/60 (5%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI + F   L   +V + M      +  D  +  A ++L +H I    V  + +  +G++
Sbjct: 162 DIEKIFA--LPKDTVGEHMSSPIITVDADQTVREAAKVLAEHTIHCAPV-KEGEAFVGLL 218


>gi|323492510|ref|ZP_08097658.1| DNA-binding transcriptional regulator HexR [Vibrio brasiliensis LMG
           20546]
 gi|323313297|gb|EGA66413.1| DNA-binding transcriptional regulator HexR [Vibrio brasiliensis LMG
           20546]
          Length = 284

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + ++L    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSISLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|323351685|ref|ZP_08087339.1| CBS domain protein [Streptococcus sanguinis VMC66]
 gi|322122171|gb|EFX93897.1| CBS domain protein [Streptococcus sanguinis VMC66]
 gi|325687989|gb|EGD30009.1| CBS domain protein [Streptococcus sanguinis SK72]
 gi|328946184|gb|EGG40329.1| CBS domain protein [Streptococcus sanguinis SK1087]
          Length = 209

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+  +I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFSIDSLPVVDKDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|313618729|gb|EFR90646.1| conserved protein YtoI [Listeria innocua FSL S4-378]
          Length = 442

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLETTAYLSTSDKVEDWHKMEEATGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|237729743|ref|ZP_04560224.1| transcriptional regulator [Citrobacter sp. 30_2]
 gi|226908349|gb|EEH94267.1| transcriptional regulator [Citrobacter sp. 30_2]
          Length = 274

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 60/143 (41%), Gaps = 4/143 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +    + L      L   L      A+ + ++    V I G+  S  +G  L   L   
Sbjct: 94  VVNESVQALQDTAKLLDRTLLESAALALHQAQS----VQIYGVAASAILGEYLHYKLLRL 149

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+        +  +   + +D L++ +S SGS+ +L  ++  AR+  + ++A+++  +
Sbjct: 150 GKPAQLFSDMHRAAMNAATLNKDTLVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPR 209

Query: 150 SVVACHADIVLTLPKEPESCPHG 172
           S +A  +DI L   K       G
Sbjct: 210 SPLASLSDIQLVAAKPEGPLSAG 232


>gi|125717885|ref|YP_001035018.1| hypothetical protein [Streptococcus sanguinis SK36]
 gi|125497802|gb|ABN44468.1| CBS domain protein, putative [Streptococcus sanguinis SK36]
 gi|327469453|gb|EGF14922.1| CBS domain protein [Streptococcus sanguinis SK330]
          Length = 209

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDEDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|94500894|ref|ZP_01307420.1| CBS domain containing membrane protein [Oceanobacter sp. RED65]
 gi|94427013|gb|EAT11995.1| CBS domain containing membrane protein [Oceanobacter sp. RED65]
          Length = 136

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 51/124 (41%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
             D +  V     L +   +    RF  + V  E   L G++++ D  +    +L + + 
Sbjct: 7   MQDRVVTVDHEASLWEVKMVFDNTRFHHLLVT-ENNILVGVLSDRDYLKAVSPNLGSATQ 65

Query: 285 -----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      V+ +M      +  D  +  A++L  Q +IS + +V++     GI+ + 
Sbjct: 66  SKADTDSLNTRVKTIMSTKLHTLSPDNTVLDAVKLFNQRSISCIPIVNEDMTIAGIISWR 125

Query: 334 DLLR 337
           D+++
Sbjct: 126 DIMK 129



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 25/53 (47%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  +     ++DA+ + +++   C+ +V+E   + GII+  DI +    
Sbjct: 81  MSTKLHTLSPDNTVLDAVKLFNQRSISCIPIVNEDMTIAGIISWRDIMKTIEA 133


>gi|16800679|ref|NP_470947.1| hypothetical protein lin1611 [Listeria innocua Clip11262]
 gi|16414098|emb|CAC96842.1| lin1611 [Listeria innocua Clip11262]
          Length = 437

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAYLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|271964180|ref|YP_003338376.1| hypothetical protein Sros_2667 [Streptosporangium roseum DSM 43021]
 gi|270507355|gb|ACZ85633.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 140

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 47/115 (40%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  ++    L  A  ++ E   G + +     +LKGIIT+ DI        KD + 
Sbjct: 10  MSSGARCIEAHETLDRAAQLMRELGVGALPICGSDDRLKGIITDRDIVVKCVAAGKDPSK 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++  ++       +  +      +  + +H I  L V+++  + +G++   DL +
Sbjct: 70  VTAGEMAT-GLVWVPANATARDVLAKMEEHQIKRLPVIENS-RIVGMISEADLAK 122



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +D+M    + I     L  A QL+R+  +  L +     +  GI+   D++
Sbjct: 5   TAKDLMSSGARCIEAHETLDRAAQLMRELGVGALPICGSDDRLKGIITDRDIV 57



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 10/48 (20%), Positives = 22/48 (45%), Gaps = 1/48 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            V       D +  + E +   + V+ E  ++ G+I+E D+ ++   D
Sbjct: 81  WVPANATARDVLAKMEEHQIKRLPVI-ENSRIVGMISEADLAKHLPDD 127


>gi|224000868|ref|XP_002290106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220973528|gb|EED91858.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 194

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 42/107 (39%), Gaps = 5/107 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVMIK- 291
              + +A+  L+    GC+   D    L G+I+E D  +      K      V  +  K 
Sbjct: 62  ESTVFEAVNKLAAYDVGCLVTKDANGNLSGVISERDYVQKIALLGKSSKDTLVRQISTKA 121

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         +   MQ +   +I  L +VD+    +GI+   DL++
Sbjct: 122 ADLVTASPSDTVDACMQKMLTRDIRHLPLVDESGAVVGIISIKDLIK 168


>gi|330807660|ref|YP_004352122.1| inosine-5-monophosphate dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327375768|gb|AEA67118.1| inosine-5-monophosphate dehydrogenase [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 489

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 57/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKRFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++    SV  V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHDGDLVGIVTSRDVRF---ENRLDASVRQV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E T      +LL +H I  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVKEGTNKEEVRELLHKHRIERVLIVDDKFALKGMMTVNDIEKAK 204


>gi|212223889|ref|YP_002307125.1| hypothetical protein TON_0740 [Thermococcus onnurineus NA1]
 gi|212008846|gb|ACJ16228.1| hypothetical protein, conserved [Thermococcus onnurineus NA1]
          Length = 135

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 49/108 (45%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL-NTLSVEDVMI 290
           V+    +  A  ++ E   G + VVD+  K+ G  T+ D I R     L NT  V ++M 
Sbjct: 18  VEPDDTVKRACEVMVEFDIGSLVVVDK-GKVIGFFTKSDVIRRVVIPGLPNTTPVREIMS 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  +T +   + L+ +  +  +++ ++  + IGI    DLL  
Sbjct: 77  SELITVNANTPVREVLDLMAKKGVKHMLI-EENGEIIGIFSLSDLLTA 123



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              ++  M +    +  D  +  A +++ + +I  L+VVD   K IG     D++R  +I
Sbjct: 4   NAPIKVYMTRKLIGVEPDDTVKRACEVMVEFDIGSLVVVDK-GKVIGFFTKSDVIRRVVI 62



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V    P+ + + ++++K    + + +E  ++ GI +  D+     + L T    +
Sbjct: 82  VNANTPVREVLDLMAKKGVKHMLI-EENGEIIGIFSLSDLLTASRRRLETAIAAE 135


>gi|167757645|ref|ZP_02429772.1| hypothetical protein CLORAM_03195 [Clostridium ramosum DSM 1402]
 gi|237735193|ref|ZP_04565674.1| ABC glycine betaine/L-proline transporter [Mollicutes bacterium D7]
 gi|167702642|gb|EDS17221.1| hypothetical protein CLORAM_03195 [Clostridium ramosum DSM 1402]
 gi|229381969|gb|EEO32060.1| ABC glycine betaine/L-proline transporter [Coprobacillus sp. D7]
          Length = 374

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 8/134 (5%)

Query: 201 ENDFYVLHPGGK---LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
            NDF     G K        +  +D+M        V + C  I A+ I+   +   + +V
Sbjct: 228 ANDFVHNFVGKKRIWDSPELIKVADIMIDKPITCNVNLKC--IKAVNIMYNYKVDSLMIV 285

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           D  Q   GI+      R  ++D     V++VM      +  D  +   + L    NI  L
Sbjct: 286 DNHQNFLGILDANQAAREKNRD---KKVDEVMHTECLSVKPDESIVDVINLANSSNIYTL 342

Query: 318 MVVDDCQKAIGIVH 331
            VVDD  K +G++ 
Sbjct: 343 PVVDDKNKLVGLIT 356



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 13/73 (17%), Positives = 23/73 (31%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
                                  VK    ++D I + +      + VVD+  KL G+IT+
Sbjct: 298 NQAAREKNRDKKVDEVMHTECLSVKPDESIVDVINLANSSNIYTLPVVDDKNKLVGLITK 357

Query: 270 GDIFRNFHKDLNT 282
             +     K  + 
Sbjct: 358 STLVTTLSKKYDE 370


>gi|116873005|ref|YP_849786.1| CBS domain-containing protein [Listeria welshimeri serovar 6b str.
           SLCC5334]
 gi|116741883|emb|CAK21007.1| CBS domain protein [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 442

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 125 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 184

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 185 YD---------QLIKKEVVFVEDILTPLETTAYLSTSDKVEDWHKMEEATGHSRFPVVNR 235

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 236 AMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 291

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 292 VKDDLTLIGIVSRQDILK 309


>gi|262039533|ref|ZP_06012832.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
 gi|261746411|gb|EEY33951.1| transcriptional regulator, RpiR family [Leptotrichia goodfellowii
           F0264]
          Length = 285

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/175 (22%), Positives = 66/175 (37%), Gaps = 5/175 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           KN ++   +  +      + SLE + +      F  A+ KI      V   G+G S  I 
Sbjct: 90  KNDSITSIIEKVFN--SNIKSLEDTKKIAEKKSFSTAL-KILTQVDIVHFFGVGGSSVIA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    +     F            ++T++D   ++S SG + E   I   A+    
Sbjct: 147 HDAYHKFLRSPLKCRFDSDFHLQLMQASLLTKNDCAFIISHSGMTKESIEIADIAKERKA 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            +I +TS   S++A  ADI      E           +S I QL+I D + I ++
Sbjct: 207 KIIVLTSYPLSILAKKADITFISTAEEIEYRSEAL--SSRIAQLSILDTIFILVM 259


>gi|194437306|ref|ZP_03069404.1| HTH-type transcriptional regulator RpiR [Escherichia coli 101-1]
 gi|253775281|ref|YP_003038112.1| DNA-binding transcriptional repressor RpiR [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|297516095|ref|ZP_06934481.1| DNA-binding transcriptional repressor RpiR [Escherichia coli OP50]
 gi|300932074|ref|ZP_07147368.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|194423862|gb|EDX39851.1| HTH-type transcriptional regulator RpiR [Escherichia coli 101-1]
 gi|242379616|emb|CAQ34438.1| AlsR transcriptional repressor [Escherichia coli BL21(DE3)]
 gi|253326325|gb|ACT30927.1| transcriptional regulator, RpiR family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253980081|gb|ACT45751.1| DNA-binding transcriptional repressor [Escherichia coli BL21(DE3)]
 gi|300460165|gb|EFK23658.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|323960403|gb|EGB56039.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H489]
 gi|323969852|gb|EGB65132.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TA007]
          Length = 296

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R  + G G S  I +
Sbjct: 109 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQR-DLYGAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|315301637|ref|ZP_07872727.1| RpiR family transcriptional regulator [Listeria ivanovii FSL
           F6-596]
 gi|313629993|gb|EFR98036.1| RpiR family transcriptional regulator [Listeria ivanovii FSL
           F6-596]
          Length = 301

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/162 (16%), Positives = 54/162 (33%), Gaps = 3/162 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  +    + KI     ++   G G S  +    +     +G  +     +         
Sbjct: 130 LDSELVTDLAKILYEAEQIDFYGCGISNLVAQDFSYRFLRSGKSTSAFADSHIQISQAQQ 189

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
                + + +S+SG + E+   L  A++     I+ TSE  + +A  A   +T       
Sbjct: 190 SGAGCVAVGISYSGETQEVITALEIAKQLGAYTISFTSEEDNSLAQVAACNIT--VAQIE 247

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHP 209
            P G     S I  L + D +    + + + +         P
Sbjct: 248 HPEGYVAAASRIEMLHVMDIIYSVYISTYDETIAAKIARTRP 289


>gi|326779705|ref|ZP_08238970.1| putative signal transduction protein with CBS domains [Streptomyces
           cf. griseus XylebKG-1]
 gi|326660038|gb|EGE44884.1| putative signal transduction protein with CBS domains [Streptomyces
           cf. griseus XylebKG-1]
          Length = 141

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 55/126 (43%), Gaps = 8/126 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFR 274
              A D+MHSG     +     L  A  ++ E   G + V    +  ++ GIIT+ DI  
Sbjct: 1   MTTAKDIMHSG--ARWIPAHETLDRAAQLMREHNVGALPVSANGDSDRMVGIITDRDIVV 58

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                  D   ++  D+    P+ I  +  +   ++ ++ H I  L VV + +K +G++ 
Sbjct: 59  GCVAKGHDPAKVTAGDLAQGTPRWIEAEADVDAVLEEMQTHRIRRLPVV-ENKKLVGMIS 117

Query: 332 FLDLLR 337
             DL +
Sbjct: 118 EADLAQ 123


>gi|268325810|emb|CBH39398.1| conserved hypothetical protein, containing CBS domain pair
           [uncultured archaeon]
 gi|268326297|emb|CBH39885.1| conserved hypothetical protein, containing CBS domain pair
           [uncultured archaeon]
          Length = 130

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKN 292
              +      + E   G V + DE  K  GIITE DI  +   KD     +  +++M   
Sbjct: 17  ETFVTKIAEDMEELGIGSVVITDE-GKPAGIITERDIALKVLLKDKRASEVKAKEIMTSP 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I  +     A +L  +  I  L VV +    +GI+   DLL
Sbjct: 76  LVTIESEASEDEACKLASRKRIKRLPVV-EDGVLVGILSIRDLL 118



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 283 LSVEDVMIKNPKVILE-DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VED+M + P +  + +T +T   + + +  I  +++ D+  K  GI+   D+
Sbjct: 1   MKVEDIMSR-PIIAEDVETFVTKIAEDMEELGIGSVVITDE-GKPAGIITERDI 52


>gi|254478238|ref|ZP_05091619.1| transcriptional regulator, RpiR family protein [Carboxydibrachium
           pacificum DSM 12653]
 gi|214035834|gb|EEB76527.1| transcriptional regulator, RpiR family protein [Carboxydibrachium
           pacificum DSM 12653]
          Length = 283

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/176 (22%), Positives = 71/176 (40%), Gaps = 5/176 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N T+   ++ I  E     ++ ++++     +   AV+ I   + ++   G+G SG+   
Sbjct: 92  NDTLDVLVQKITTENT--MAISNTVKLLSLNELEKAVDAIINAR-KIQFYGVGASGYTAL 148

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                    G        +         +T +D+ + +S+SGS+ +       A+     
Sbjct: 149 DAKYKFMRLGLNVDANLDSHIQAISAVSLTNEDVAVGISFSGSTKDTVETCRLAKEAGAK 208

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +IAIT+  +S +   ADIVL    +      G    TS I QL I D L  A+   
Sbjct: 209 VIAITNYARSPITSVADIVLLTSAKETPLRSGAL--TSKIAQLHILDILYTAVAVR 262


>gi|18313671|ref|NP_560338.1| hypothetical protein PAE2898 [Pyrobaculum aerophilum str. IM2]
 gi|18161221|gb|AAL64520.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 139

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 52/115 (45%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDL-NT 282
           +      +     + +A  I++E R G + +V+     K  G+I+E DI R   K    T
Sbjct: 7   AKKPPITITPDKTVEEAAAIMAENRVGLLVIVERENPKKPIGVISERDIIRTIAKKAPLT 66

Query: 283 LSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V+      N   +  D  + VA + ++Q  +  ++V+D   +  G++   DL+
Sbjct: 67  TTVDKAGTMHNFVYVYADEPIIVAAKKMKQFQVRHIVVLDRNGEVYGVISIRDLI 121



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLR 337
           ++  ++  K P  I  D  +  A  ++ ++ + +L++V+     K IG++   D++R
Sbjct: 1   MTCGEIAKKPPITITPDKTVEEAAAIMAENRVGLLVIVERENPKKPIGVISERDIIR 57


>gi|54308368|ref|YP_129388.1| hypothetical protein PBPRA1175 [Photobacterium profundum SS9]
 gi|46912796|emb|CAG19586.1| hypothetical protein PBPRA1175 [Photobacterium profundum SS9]
          Length = 152

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/132 (18%), Positives = 56/132 (42%), Gaps = 11/132 (8%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--- 274
           +      +    +  ++    L +A  ++ +     + V +   +L G I++ ++ R   
Sbjct: 1   MPTKVSEYMTRKVVTIQPDTGLREAFFLMRDNAIRHLPVTNIDGELIGFISDRELRRPRW 60

Query: 275 --------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                   + +   + L V DVM+K+   +     LT A+  +  H+IS   V+D   + 
Sbjct: 61  VDESPDIGHEYDLTDDLHVADVMVKDIIHVRTYDTLTKAVGTILNHSISAAPVLDKTGQL 120

Query: 327 IGIVHFLDLLRF 338
           +G++  +DLL  
Sbjct: 121 VGMLSAVDLLSA 132


>gi|86146290|ref|ZP_01064615.1| hypothetical protein MED222_16301 [Vibrio sp. MED222]
 gi|218709809|ref|YP_002417430.1| hypothetical protein VS_1821 [Vibrio splendidus LGP32]
 gi|85836001|gb|EAQ54134.1| hypothetical protein MED222_16301 [Vibrio sp. MED222]
 gi|218322828|emb|CAV19005.1| hypothetical protein VS_1821 [Vibrio splendidus LGP32]
          Length = 629

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNFHKDL 280
           P+++    +  A T++++     + ++D         +   + GIIT+ D+  R   + L
Sbjct: 161 PMIEKTRTIQQAATMMAQDNVSSLLIIDPDIVEDDEDDSTPVIGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +  V  VM      +  +  +  AM  + ++N+  L V+   +K IGI+   D++R+
Sbjct: 221 DPSDEVSSVMTAEVISLDHNAYVYEAMMTMLRYNVHHLPVL-KDKKPIGIIEATDIVRY 278


>gi|330719408|ref|ZP_08314008.1| transcriptional regulator [Leuconostoc fallax KCTC 3537]
          Length = 283

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/195 (20%), Positives = 74/195 (37%), Gaps = 8/195 (4%)

Query: 1   MHFYFSHFKSVTRK--GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVE 58
           +    S  +++T    G     ++T+  A +        L++ E++L G+   +   A +
Sbjct: 70  LALASSSVRNITNDFFGEISDDDNTIAIAHKVFHGATNALATTEANLDGQ---KLDHATQ 126

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            +     RV   GIG S  +          T    F     +    +   + + D+ +V+
Sbjct: 127 ALINS-NRVGFFGIGGSSILAFNAYHKFLRTPLNVFAHPDYDIQLMEAVRMKKGDVGVVI 185

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + +   I    +   + +IAIT+   + +A  ADI        E         +S
Sbjct: 186 SHSGRNKDTLLIAQKLKENGVLMIAITAFEDAPLAKIADINFL--SLAEEVNFRSESMSS 243

Query: 179 AIMQLAIGDALAIAL 193
            I Q+ I D L   +
Sbjct: 244 LIAQVTIIDTLFTLV 258


>gi|330469753|ref|YP_004407496.1| CBS domain-containing protein [Verrucosispora maris AB-18-032]
 gi|328812724|gb|AEB46896.1| CBS domain-containing protein [Verrucosispora maris AB-18-032]
          Length = 138

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK--DLNTLSVEDVMIKN 292
              L+ A   + +   G V V D    + GIIT+ DI  R   +  D NT  +  +  K+
Sbjct: 18  NDTLVAAAQEMRDSAIGDVVVTDGDN-VVGIITDRDITVRGVAESLDPNTTRLNQLTTKD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +      A  L+R + +  L VV +  + IG+V   DL
Sbjct: 77  VITVSQYDDAVSAADLMRTYAVRRLPVV-EDGRLIGLVSMGDL 118



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M      +  +  L  A Q +R   I  ++V D     +GI+   D+   G+
Sbjct: 2   TTVGEFMTTRLVTMDGNDTLVAAAQEMRDSAIGDVVVTDGDN-VVGIITDRDITVRGV 58


>gi|325959651|ref|YP_004291117.1| peptidase M50 [Methanobacterium sp. AL-21]
 gi|325331083|gb|ADZ10145.1| peptidase M50 [Methanobacterium sp. AL-21]
          Length = 355

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
              ++  VK    + + + I+  EK  G   V D+   L GI+T  D+ +    + +TL 
Sbjct: 233 MTTTVHTVKPSNTVKETLKIMFKEKHMG-YPVTDD-GHLIGIVTFHDLSKIPEAEKDTL- 289

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + D+M K+  V   +  L   ++ L ++ I  + +V +  + +GIV   D+ 
Sbjct: 290 INDIMTKDLVVSDPEESLMETLEKLNRNRIGRVPIVWE-NRLVGIVSKTDIT 340



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    V+DVM      +     +   ++++ +       V DD    IGIV F DL + 
Sbjct: 224 LENEKVKDVMTTTVHTVKPSNTVKETLKIMFKEKHMGYPVTDD-GHLIGIVTFHDLSKI 281


>gi|121535407|ref|ZP_01667218.1| transcriptional regulator, RpiR family [Thermosinus carboxydivorans
           Nor1]
 gi|121306006|gb|EAX46937.1| transcriptional regulator, RpiR family [Thermosinus carboxydivorans
           Nor1]
          Length = 287

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 63/172 (36%), Gaps = 6/172 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A +       GL      +          AV  I   + R+   G   S  I + +   
Sbjct: 102 IARKVFHDINEGLQDTLKIIDE---AALDKAVAAITKAR-RIDAYGSAGSAVIAADIEYR 157

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G P               ++   DL I +S +G++ +L   +  A++    +IAIT
Sbjct: 158 FMRFGIPVRAYADPHMQIISAALMQPGDLAIAVSHTGANRDLLDSVAMAKQNGATVIAIT 217

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           S  KS ++  ADI L    +            + ++ LAI DAL + ++  R
Sbjct: 218 SYMKSPLSKLADITLCGSAKETEYR--SEAMAARLVHLAIVDALYVGVMLDR 267


>gi|161522498|ref|YP_001585427.1| CBS domain-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189348627|ref|YP_001941823.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|221198654|ref|ZP_03571699.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
 gi|221207885|ref|ZP_03580892.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221211855|ref|ZP_03584833.1| CBS domain containing protein [Burkholderia multivorans CGD1]
 gi|160346051|gb|ABX19135.1| CBS domain containing protein [Burkholderia multivorans ATCC 17616]
 gi|189338765|dbj|BAG47833.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|221167940|gb|EEE00409.1| CBS domain containing protein [Burkholderia multivorans CGD1]
 gi|221172382|gb|EEE04822.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221181105|gb|EEE13507.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
          Length = 143

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     +  A  +++    G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAELMARYDIGALPVCD-NNRLVGMVTDRDLAVRAVSAGKPPDT 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +V    P     +D  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RVHEVAS-GPIEWCFDDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   I     +  A +L+ +++I  L V D+  + +G+V   DL
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAELMARYDIGALPVCDN-NRLVGMVTDRDL 53


>gi|52549934|gb|AAU83783.1| conserved hypothetical protein [uncultured archaeon GZfos33H6]
          Length = 271

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +      + E   G V +   G K  G++T+ DI        K  + +  +D+M
Sbjct: 153 VDEDTFVSKISKDMEESGIGGVVIT-RGGKPVGMVTDRDIASKVILEDKKASEIKAKDIM 211

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 I  D  +  A  ++   +I  + V+D+  K +GI+   ++L
Sbjct: 212 CSPLITIGPDASVEKACGIMAAKDIRRMPVMDED-KLVGIISVRNIL 257



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIK 291
               +      +     G V +  E  K  GI+T+ DI       + T   ++V+ +M  
Sbjct: 16  EDTSVTIITRDMELSEIGSVVITRED-KPVGIVTDRDISIKICAKMGTPGEVTVKGIMSS 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +  A +LL + +I  L V+++  K +GI+   ++L
Sbjct: 75  PLITIGPEAPVETACELLAETDIRRLPVMEND-KLVGIISVRNIL 118



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VEDVM        EDT +T+  + +    I  +++  +  K +GIV   D+
Sbjct: 1   MKVEDVMSSPVITEDEDTSVTIITRDMELSEIGSVVITRED-KPVGIVTDRDI 52


>gi|261253288|ref|ZP_05945861.1| hypothetical protein VIA_003313 [Vibrio orientalis CIP 102891]
 gi|260936679|gb|EEX92668.1| hypothetical protein VIA_003313 [Vibrio orientalis CIP 102891]
          Length = 284

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCTDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSISLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|83717973|ref|YP_439117.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|167577542|ref|ZP_02370416.1| CBS domain protein [Burkholderia thailandensis TXDOH]
 gi|167615695|ref|ZP_02384330.1| CBS domain protein [Burkholderia thailandensis Bt4]
 gi|257142228|ref|ZP_05590490.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|83651798|gb|ABC35862.1| CBS domain protein [Burkholderia thailandensis E264]
          Length = 149

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIF-RNFHKD-- 279
           S   +      C  ++    +     G + V+   D      G++T+ D+      +   
Sbjct: 7   STQPVEFCTADCNALELAERMRHAHVGDIVVIEYRDGDAVPIGLVTDRDLVVEVMARGEA 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++   VM +   V+ E   + +A++ +R+  I  L VVDD  +  GIV   D++ +
Sbjct: 67  PDQVTAGQVMSRGLIVVSETDEIAMALEEMRRSGIRRLPVVDDMGRLTGIVTLDDIVEY 125



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 18/93 (19%), Positives = 31/93 (33%), Gaps = 7/93 (7%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           GDA+ I L+  R+               G      +        + +V     +  A+  
Sbjct: 43  GDAVPIGLVTDRDLVVEVMAR-------GEAPDQVTAGQVMSRGLIVVSETDEIAMALEE 95

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           +       + VVD+  +L GI+T  DI      
Sbjct: 96  MRRSGIRRLPVVDDMGRLTGIVTLDDIVEYLAA 128


>gi|257867186|ref|ZP_05646839.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC30]
 gi|257873521|ref|ZP_05653174.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC10]
 gi|257877296|ref|ZP_05656949.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC20]
 gi|257801242|gb|EEV30172.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC30]
 gi|257807685|gb|EEV36507.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC10]
 gi|257811462|gb|EEV40282.1| CBS:Thioesterase superfamily:DRTGG [Enterococcus casseliflavus
           EC20]
          Length = 443

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 73/200 (36%), Gaps = 15/200 (7%)

Query: 141 LIAITSENKSVVACH--ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +I         +A    A +++T   E       LA      +     D   +A + +R 
Sbjct: 119 VIVGNRNEVHKLALEDGAAVLITGGFETSEEICRLADELELPILQTTYDTFTVATMINRA 178

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S+           +    +  SD+    +    +     + D   +          VV+
Sbjct: 179 LSD---------QLIKKDIMLVSDIYMPLEKTKYLHTFDTVKDYKLLSESTNHSRYPVVN 229

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +  ++ GIIT  D+        +T  +E +M + P+V+ ++  +  A   +    + V+ 
Sbjct: 230 KNMRVVGIITAKDVLEK----PDTQIIERIMTREPRVVKKEMSVASASHQMIWDGLEVMP 285

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VV D    IGIV   D+++ 
Sbjct: 286 VVADDLSLIGIVTRQDIMKA 305



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 12/62 (19%), Positives = 20/62 (32%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +VK    +  A   +       + VV +   L GI+T  DI +          +
Sbjct: 256 MTREPRVVKKEMSVASASHQMIWDGLEVMPVVADDLSLIGIVTRQDIMKAMQMVQRQTQI 315

Query: 286 ED 287
            D
Sbjct: 316 SD 317


>gi|256788937|ref|ZP_05527368.1| inosine 5-monophosphate dehydrogenase [Streptomyces lividans TK24]
          Length = 480

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 H  D+  ++     + DA+ +L ++      VVDE  K  G++T+ D+    + 
Sbjct: 88  WVKSRHHVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDEDGKPVGVVTDTDL----NG 143

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +E+VM K+  +I  D     A   L   N      VD+  +  GI+     LR 
Sbjct: 144 VDRFTQLEEVMSKDLILIDADLDPREAFNTLDAANRRYAPAVDEGGRLAGILTRKGALRA 203


>gi|220936288|ref|YP_002515187.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Thioalkalivibrio sp. HL-EbGR7]
 gi|219997598|gb|ACL74200.1| cyclic nucleotide-binding domain (cNMP-BD) protein
           [Thioalkalivibrio sp. HL-EbGR7]
          Length = 633

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 52/127 (40%), Gaps = 19/127 (14%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVV-------------DEGQK---LKGIITEGDIF 273
             ++     + +A  +++E+    V ++             D   +   L G++T+ D+ 
Sbjct: 159 PVMIHESATVQEAARLMTEQDVSSVLLIAPAISDDSERVFADAEGRHWQLAGMVTDKDLR 218

Query: 274 -RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   +       +  +       I  D  +  AM  + ++NI  L V+   ++ +G+VH
Sbjct: 219 ERIVARGAPPDTPLSAISHGQLITIQSDESVYEAMLAMLRNNIQRLPVL-HRRRPVGVVH 277

Query: 332 FLDLLRF 338
             D++R+
Sbjct: 278 LADIVRY 284


>gi|145598352|ref|YP_001162428.1| DNA-binding transcriptional regulator HexR [Yersinia pestis
           Pestoides F]
 gi|21959091|gb|AAM85805.1|AE013827_6 hypothetical protein y2245 [Yersinia pestis KIM 10]
 gi|45436572|gb|AAS62126.1| Transcriptional regulators [Yersinia pestis biovar Microtus str.
           91001]
 gi|108775353|gb|ABG17872.1| hex regulon repressor [Yersinia pestis Nepal516]
 gi|108779357|gb|ABG13415.1| hex regulon repressor [Yersinia pestis Antiqua]
 gi|145210048|gb|ABP39455.1| hex regulon repressor [Yersinia pestis Pestoides F]
          Length = 341

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+           + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 155 MASLDRVKNNLDIAAINRAVDLLTQAK-KISFFGLGSSAAVAHDAMNKFFRFNIPVIYFD 213

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 214 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARENDAAVIAITS-CDTPLANEAT 272

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 273 LSLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 316


>gi|289772825|ref|ZP_06532203.1| IMP dehydrogenase [Streptomyces lividans TK24]
 gi|289703024|gb|EFD70453.1| IMP dehydrogenase [Streptomyces lividans TK24]
          Length = 483

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 4/120 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 H  D+  ++     + DA+ +L ++      VVDE  K  G++T+ D+    + 
Sbjct: 91  WVKSRHHVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDEDGKPVGVVTDTDL----NG 146

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +E+VM K+  +I  D     A   L   N      VD+  +  GI+     LR 
Sbjct: 147 VDRFTQLEEVMSKDLILIDADLDPREAFNTLDAANRRYAPAVDEGGRLAGILTRKGALRA 206


>gi|228993039|ref|ZP_04152962.1| transcriptional regulator [Bacillus pseudomycoides DSM 12442]
 gi|228999089|ref|ZP_04158671.1| transcriptional regulator [Bacillus mycoides Rock3-17]
 gi|229006637|ref|ZP_04164271.1| transcriptional regulator [Bacillus mycoides Rock1-4]
 gi|228754498|gb|EEM03909.1| transcriptional regulator [Bacillus mycoides Rock1-4]
 gi|228760706|gb|EEM09670.1| transcriptional regulator [Bacillus mycoides Rock3-17]
 gi|228766687|gb|EEM15327.1| transcriptional regulator [Bacillus pseudomycoides DSM 12442]
          Length = 211

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKVKVQDYQSRPVVIDKNISVYDAICTMFLEDVGTLFVVDQATLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  VAM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDVAMELIE-RQIDAVP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 181 VVKDTKQGLEVVGRITKTNITRA 203


>gi|225620669|ref|YP_002721927.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
 gi|225215489|gb|ACN84223.1| transcriptional regulator [Brachyspira hyodysenteriae WA1]
          Length = 285

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/158 (20%), Positives = 64/158 (40%), Gaps = 6/158 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGEL-----SFQFHCAVEKIKAIKGRVVITGIGKSG 76
           +T+  A  ++      +  L  S   +            A + I+  +  + + GIG S 
Sbjct: 84  NTIISADDNVEELCNKIMLLIKSSNEDFFYQLDKEALEKAFKLIRNARN-IYMLGIGASS 142

Query: 77  HIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR 136
                L   L      +FF   A  +      +T +D++I  S+SG ++E+   +  A  
Sbjct: 143 LSAYDLFHKLKRANFNAFFYEDAHLNAEFFNYLTEEDVVIAFSYSGRTNEVIYPVKIASS 202

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
               +IA+T +  + ++  AD+++T+P   E    G  
Sbjct: 203 KKASIIAVTRKKTNNLSKMADVLITVPNNEELTRMGAI 240


>gi|205374526|ref|ZP_03227322.1| YtoI [Bacillus coahuilensis m4-4]
          Length = 351

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/194 (18%), Positives = 73/194 (37%), Gaps = 13/194 (6%)

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
           T  ++  +   A +++T   + +     LA      +     D   +A + +R   +   
Sbjct: 41  TGAHEQALLAGAAVLITGGFDTDPHVKQLADELELPIISTSYDTFTVATMINRAIYD--- 97

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
                   +    V   D++   +    +     +     + S        VVD   K+ 
Sbjct: 98  ------QLIKKEIVLVEDILTPIEKTAFLTTDDTVGKWYELKSSTSHSRYPVVDPNMKVV 151

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           GIIT  D+  +  +D+    +E VM KNP  +   + +     ++   +I +L VV +  
Sbjct: 152 GIITSKDVL-DVEQDVL---IEKVMTKNPITVPLKSSVASTAHMMIWESIELLPVVSEQS 207

Query: 325 KAIGIVHFLDLLRF 338
           K  G+V   D+L+ 
Sbjct: 208 KLQGLVSRQDVLKA 221


>gi|146304191|ref|YP_001191507.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145702441|gb|ABP95583.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 144

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 4/116 (3%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVE 286
                +     L+ A  ++ ++  G + VV EG + KGII+E DI      DL  T  V 
Sbjct: 24  REPVTIDPESDLVRAAKLMKKEIVGSLLVV-EGGEPKGIISERDIVYAIASDLPLTTKVR 82

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR-FGII 341
           +VM  N       T +  A  L+    I  L VV +  + IG+V   D+ R  G+I
Sbjct: 83  EVMSTNLVTADAGTDVGEAAILMVGKGIRHL-VVKEGSRVIGVVSLRDVARSLGLI 137


>gi|257897009|ref|ZP_05676662.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com12]
 gi|257833574|gb|EEV59995.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium Com12]
          Length = 282

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE ++  +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLETAES-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSLLAQFATIDII 252


>gi|262196346|ref|YP_003267555.1| CBS domain containing protein [Haliangium ochraceum DSM 14365]
 gi|262079693|gb|ACY15662.1| CBS domain containing protein [Haliangium ochraceum DSM 14365]
          Length = 155

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----KDLN 281
           +      V     LID +  L EKR G   ++++G  + GI TE D+         +  +
Sbjct: 14  TIREPVRVSPEAKLIDVVNSLREKRRGAA-IIEDGGSVVGIFTERDLMLRVDHSAGESWH 72

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              V D M  +  ++     ++VA+Q +RQ     L V     K + +V   D+L
Sbjct: 73  DKPVRDFMTGDVVMVKAQDSISVAVQKMRQGLFRHLPVDLGPGKPVRLVSIRDVL 127



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/61 (21%), Positives = 26/61 (42%), Gaps = 1/61 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K++    V +V I+ P  +  +  L   +  LR+       +++D    +GI    DL
Sbjct: 1   MLKEIAATPVSEVTIREPVRVSPEAKLIDVVNSLREKR-RGAAIIEDGGSVVGIFTERDL 59

Query: 336 L 336
           +
Sbjct: 60  M 60


>gi|148252731|ref|YP_001237316.1| RpiR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gi|146404904|gb|ABQ33410.1| transcriptional regulator, RpiR family [Bradyrhizobium sp. BTAi1]
          Length = 270

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/143 (23%), Positives = 53/143 (37%), Gaps = 3/143 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
                A   ++  + R+ I GIG S  I   L+  L   G  +  +  +       GM  
Sbjct: 107 EALAEATRLLREAQ-RIEIYGIGSSAPIAQDLSYRLLQLGLAANAIVDSHVQAVSAGMTG 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
                + +S SGS+ E       A+      I IT   KS +A H +++L          
Sbjct: 166 PGVATVTVSHSGSTVETVLATRLAQAAGARTIGITRLGKSPLAAHCEVLLYT--VANETR 223

Query: 171 HGLAPTTSAIMQLAIGDALAIAL 193
           +     +S + QLAI D L    
Sbjct: 224 YRPEAMSSRVAQLAIIDTLVSCC 246


>gi|325958073|ref|YP_004289539.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325329505|gb|ADZ08567.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 264

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V    P  + I ++         V     ++ G++T  D+     K+   L 
Sbjct: 10  YMTKEVITVNPETPNEEVIMLMKGTGHDGFPVK-TNGEVIGMVTAFDL---LLKEWLPL- 64

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+D+M  +  V  ED  +  A +++ +  IS L V++   K +GI+   D++R
Sbjct: 65  VKDIMSTDIVVAEEDMSINDAARVMFRMGISRLPVINKNSKLVGILTNTDIVR 117



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M K    +  +T     + L++        V     + IG+V   DLL
Sbjct: 7   VKDYMTKEVITVNPETPNEEVIMLMKGTGHDGFPV-KTNGEVIGMVTAFDLL 57


>gi|302039062|ref|YP_003799384.1| hypothetical protein NIDE3783 [Candidatus Nitrospira defluvii]
 gi|300607126|emb|CBK43459.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 157

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/90 (23%), Positives = 49/90 (54%), Gaps = 2/90 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            V VVD+ ++L G+++E D+     +    +  + +D+M +NP  +  +T L+  + +L 
Sbjct: 57  HVPVVDQAKQLAGVVSEHDLLSALDEGQAWSAQTAKDLMTENPYSVPPETSLSTLIHVLT 116

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++  + VV    + +G+V   D++R  +
Sbjct: 117 ESDLMSVPVVTAQNRLVGVVTRRDVVRAAL 146



 Score = 39.1 bits (90), Expect = 0.88,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             ++   V     L   I +L+E     V VV    +L G++T  D+ R 
Sbjct: 95  MTENPYSVPPETSLSTLIHVLTESDLMSVPVVTAQNRLVGVVTRRDVVRA 144



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L+V D++ K  +    D       +LL +   S + VVD  ++  G+V   DLL  
Sbjct: 22  FEELTVGDIVNKRVQAARLDMKGDRVAKLLLKEG-SHVPVVDQAKQLAGVVSEHDLLSA 79


>gi|296332052|ref|ZP_06874516.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305675553|ref|YP_003867225.1| acetoin degradation regulation pathway protein [Bacillus subtilis
           subsp. spizizenii str. W23]
 gi|296150823|gb|EFG91708.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis subsp. spizizenii ATCC 6633]
 gi|305413797|gb|ADM38916.1| component of the acetoin degradation regulation pathway [Bacillus
           subtilis subsp. spizizenii str. W23]
          Length = 214

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/110 (28%), Positives = 46/110 (41%), Gaps = 9/110 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------HKDLNTLSVED 287
              L  AI  L E     + VVDE + + G+IT+ D+ +               T SV+ 
Sbjct: 17  TDTLETAICKLKEFHIRHLPVVDEDRHVIGMITDRDMKQASPSIFEESKRSRFLTRSVDS 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+         +     +  +H I  L VV   QK +GI+   DLLR
Sbjct: 77  IMKKDVVCAHPLDFVEEISAVFYEHGIGCLPVV-QHQKVVGILTKTDLLR 125



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VE +M ++   + +   L  A+  L++ +I  L VVD+ +  IG++   D+ + 
Sbjct: 3   VEQIMKRDVITLTKTDTLETAICKLKEFHIRHLPVVDEDRHVIGMITDRDMKQA 56


>gi|294489571|gb|ADE88327.1| transcriptional regulator, RpiR family [Escherichia coli IHE3034]
          Length = 297

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R  + G G S  I +
Sbjct: 110 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQR-DLYGAGGSNAICA 158

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 159 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 218

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 219 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 271


>gi|197334997|ref|YP_002155425.1| transcriptional regulator, RpiR family [Vibrio fischeri MJ11]
 gi|197316487|gb|ACH65934.1| transcriptional regulator, RpiR family [Vibrio fischeri MJ11]
          Length = 292

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VT + ++ +    +Q  + S++AE   L + +S              E +K  K  +  
Sbjct: 98  DVTAEDNAEVIGHKLQSTIESVLAETMNLLNFQS---------LESVAEALKDAKA-IYF 147

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG             G            +    ++   D  + LS SG+S E   
Sbjct: 148 FGVGSSGLTAESAKHKFMRIGLNVDAFTNNHFMYIKSSLMQPGDFAVGLSHSGNSVETTK 207

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            L  A+      IAIT   +S +  ++D VL                 + I QL + D +
Sbjct: 208 ALRLAKENGATTIAITHNPRSDITKYSDYVLVNGNRQGQLQGDSI--GTKISQLFVLDLI 265

Query: 190 AIALLES 196
              L++ 
Sbjct: 266 YTLLVKR 272


>gi|117621246|ref|YP_856489.1| HPP family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
 gi|117562653|gb|ABK39601.1| HPP family protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 375

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 51/134 (38%), Gaps = 8/134 (5%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L                + L++   P + A  +LS  +   + VVDE  +L GIIT  D
Sbjct: 224 ALRARVGTVRVQEVMSRDLILIEAQQPAMAAWQLLSHHQVKALPVVDEAGRLIGIITLHD 283

Query: 272 IF--RNFHK-----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +   R   +     DL  L V D+M +N         L   +       +  + VVD  Q
Sbjct: 284 LMIDRALQQPRGAADLAELRVADLMTRNVSTARRYQPLYDLVGAFSDGGLHHMPVVDGEQ 343

Query: 325 KAIGIVHFLDLLRF 338
             +GI+   D++  
Sbjct: 344 -LVGILTQSDMVAA 356


>gi|51244818|ref|YP_064702.1| hypothetical protein DP0966 [Desulfotalea psychrophila LSv54]
 gi|50875855|emb|CAG35695.1| conserved hypothetical protein [Desulfotalea psychrophila LSv54]
          Length = 625

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/148 (16%), Positives = 56/148 (37%), Gaps = 12/148 (8%)

Query: 202 NDFYVLHPG---GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV- 257
            D   L          +    +  V        ++     +  A   ++ +    + +  
Sbjct: 129 EDVTRLRQAVSTSNAASDLTTSKVVTLLTREAVMIAHDQTIQQAARTMAAENVSAILISP 188

Query: 258 -----DEGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                ++ +   GIIT+ D+  R   + ++   +V  VM  +   +  +  +  AM  + 
Sbjct: 189 PENTSEDDEPFAGIITDRDLCSRVLAEGVSSDTAVSKVMSTDLIFLDSNAYVFEAMLTML 248

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++NI  L V+   +  IGI+   D++R+
Sbjct: 249 RNNIHHLPVL-RNKTPIGIIEITDIVRY 275


>gi|332523353|ref|ZP_08399605.1| putative 6-phospho 3-hexuloisomerase [Streptococcus porcinus str.
           Jelinkova 176]
 gi|332314617|gb|EGJ27602.1| putative 6-phospho 3-hexuloisomerase [Streptococcus porcinus str.
           Jelinkova 176]
          Length = 184

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 71/179 (39%), Gaps = 11/179 (6%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           ++ L  LE + +     Q    ++ I   K  + + G G+SG      A+ L   G    
Sbjct: 8   QQILKELEENSKKLSDNQASLVLKNILKAK-HIFLAGAGRSGLAVKGFANRLLHLGFDVS 66

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V    + H         D++I+ S SG +  LK +   A++  + +  IT    S +  
Sbjct: 67  IVGEISSPHSH-----EGDMVIICSGSGETPSLKGLAEKAKKGGLSISLITMAENSSIGN 121

Query: 155 HADIVLTLPKEPESCPHG---LAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
            AD  + LP   ++   G   + P  SA  Q+A    DAL + L+     +    +  H
Sbjct: 122 LADSKIILPGRIKTDSEGEQSIQPMGSAFEQMAFILFDALVLDLMTELQETSETMFARH 180


>gi|302038051|ref|YP_003798373.1| hypothetical protein NIDE2742 [Candidatus Nitrospira defluvii]
 gi|300606115|emb|CBK42448.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 130

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--- 276
               M   D    V+    +  A  ++ ++  G + V + G+ + GI+T+ D+ R     
Sbjct: 4   VKSFMVPKDKFITVERDMDVRSAGRVMRDRNIGSLFVTN-GKDVIGILTDTDMVRRVVAT 62

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+   +VE +M      I E   L  A  L+ Q ++  L V     + +G++   DL+
Sbjct: 63  GADMTKTTVEQIMSAPLVTIEEHKTLLDANDLMAQTHLRHLGVT-KDGQLVGMISVRDLV 121



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 284 SVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V+  M+       +  D  +  A +++R  NI  L V +     IGI+   D++R
Sbjct: 3   PVKSFMVPKDKFITVERDMDVRSAGRVMRDRNIGSLFVTNGKD-VIGILTDTDMVR 57


>gi|224585393|ref|YP_002639192.1| Protein rpiR [Salmonella enterica subsp. enterica serovar Paratyphi
           C strain RKS4594]
 gi|224469921|gb|ACN47751.1| Protein rpiR [Salmonella enterica subsp. enterica serovar Paratyphi
           C strain RKS4594]
          Length = 293

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/184 (17%), Positives = 69/184 (37%), Gaps = 7/184 (3%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            V       ++       L SI+A +  L+ ++ S+   +++ F       K  + ++ I
Sbjct: 91  PVIPDSEGFIEKIFESTLLNSILALQEALNVIDCSIIKSVAWLFIH-----KNAEAKIFI 145

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G S  I       L   G  S     +        ++ + D+++ +S SG + ++  
Sbjct: 146 AGCGGSASICDDFNHKLLKIGIFSTVFSDSHKQLMSASLMRQGDILLAVSHSGQTSDIIQ 205

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  A       I +T+   S ++      +    +        A  T+ I+ L I DA+
Sbjct: 206 MVNIANERGAETICLTNYPNSPLSLICRHSIISAVKNNPITGENA--TTRIVHLNILDAI 263

Query: 190 AIAL 193
              +
Sbjct: 264 FTII 267


>gi|239625997|ref|ZP_04669028.1| transcriptional regulator [Clostridiales bacterium 1_7_47_FAA]
 gi|239520227|gb|EEQ60093.1| transcriptional regulator [Clostridiales bacterium 1_7_47FAA]
          Length = 295

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 72/170 (42%), Gaps = 6/170 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + +S L+ +L+         A + I   + ++ +  +  S  +   L + L   G    
Sbjct: 117 AQSVSYLDDALKHISPSSIGRAAKLICGAR-QIAVYYVENSASVAGDLVTKLMYLGFNCI 175

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
             +     H   G +   D+ I +S+SGSS     ++  A++     IAIT+   S++A 
Sbjct: 176 MYNDIYLQHISAGNLDSRDVAIGISYSGSSKNTVDVMKLAKKKGAATIAITNFEHSLIAG 235

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA--LAIALLESRNFSEN 202
           HADI+L    +     +      S + Q A+ D   + I L +  +F+E 
Sbjct: 236 HADILLCTSSQQLLYGN---AIFSRMSQTAVVDMIYMGIILRDYGHFTEK 282


>gi|114777295|ref|ZP_01452306.1| CBS [Mariprofundus ferrooxydans PV-1]
 gi|114552440|gb|EAU54923.1| CBS [Mariprofundus ferrooxydans PV-1]
          Length = 139

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDVM 289
           +     +++A  +++E   G V +     ++ GI TE ++  R   KD N  T+ ++DVM
Sbjct: 14  IDEHHTVLEAAKLMTENYIGSVVIT-SHSRIVGIFTERELMMRVVGKDRNPDTVKIKDVM 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   I  D     A+ ++       L+V D  +  IG++   D++
Sbjct: 73  HTDHLKISSDASCEEALHIMETKRCRHLLVFDGDE-FIGLISLRDII 118


>gi|69245749|ref|ZP_00603615.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257880252|ref|ZP_05659905.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257883052|ref|ZP_05662705.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257885298|ref|ZP_05664951.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,501]
 gi|257891364|ref|ZP_05671017.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257893639|ref|ZP_05673292.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|258614442|ref|ZP_05712212.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecium DO]
 gi|260560450|ref|ZP_05832624.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|261208967|ref|ZP_05923372.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|289565221|ref|ZP_06445673.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           D344SRF]
 gi|293556706|ref|ZP_06675270.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1039]
 gi|293563268|ref|ZP_06677718.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1162]
 gi|294615019|ref|ZP_06694908.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1636]
 gi|294621404|ref|ZP_06700576.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|68195642|gb|EAN10082.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257814480|gb|EEV43238.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257818710|gb|EEV46038.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,502]
 gi|257821150|gb|EEV48284.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,501]
 gi|257827724|gb|EEV54350.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257830018|gb|EEV56625.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|260073452|gb|EEW61780.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|260077006|gb|EEW64728.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           TC 6]
 gi|289163042|gb|EFD10890.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           D344SRF]
 gi|291592150|gb|EFF23770.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1636]
 gi|291599051|gb|EFF30096.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium U0317]
 gi|291601168|gb|EFF31456.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1039]
 gi|291604720|gb|EFF34204.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1162]
          Length = 282

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE +++ +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLESAET-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKSMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSLLAQFATIDII 252


>gi|117626377|ref|YP_859700.1| DNA-binding transcriptional repressor RpiR [Escherichia coli APEC
           O1]
 gi|237703678|ref|ZP_04534159.1| rpiR protein [Escherichia sp. 3_2_53FAA]
 gi|254037100|ref|ZP_04871177.1| rpiR protein [Escherichia sp. 1_1_43]
 gi|301019255|ref|ZP_07183449.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331644837|ref|ZP_08345954.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli H736]
 gi|331650118|ref|ZP_08351191.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli M605]
 gi|26111338|gb|AAN83520.1|AE016771_31 Protein rpiR [Escherichia coli CFT073]
 gi|536933|gb|AAA96988.1| ORF_f307 [Escherichia coli str. K-12 substr. MG1655]
 gi|91075211|gb|ABE10092.1| protein RpiR [Escherichia coli UTI89]
 gi|115515501|gb|ABJ03576.1| putative transcriptional regulator RpiR [Escherichia coli APEC O1]
 gi|226840206|gb|EEH72208.1| rpiR protein [Escherichia sp. 1_1_43]
 gi|226901590|gb|EEH87849.1| rpiR protein [Escherichia sp. 3_2_53FAA]
 gi|299882304|gb|EFI90515.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|331035812|gb|EGI08050.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli H736]
 gi|331041063|gb|EGI13220.1| HTH-type transcriptional regulator RpiR (Als operon repressor)
           [Escherichia coli M605]
          Length = 307

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R  + G G S  I +
Sbjct: 120 NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQR-DLYGAGGSNAICA 168

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 169 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 228

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 229 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 281


>gi|302037171|ref|YP_003797493.1| hypothetical protein NIDE1839 [Candidatus Nitrospira defluvii]
 gi|300605235|emb|CBK41568.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 140

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 5/112 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLS 284
             +  +     ++DA T+++E+  G   +     K+ G+ TE D+        +D   + 
Sbjct: 11  HRVVTIDENHSVLDAATLMAEEFVGSALIT-SSSKITGVFTERDLMMRVVGRKRDPEKVK 69

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++DVM KN   +         + L+++H    L+V D+ +  IGIV   D++
Sbjct: 70  IKDVMTKNMVTVNPKDTAHYCLNLMKEHRCRHLLVFDNEE-FIGIVSLRDMV 120


>gi|218288797|ref|ZP_03493060.1| putative signal-transduction protein with CBS and DRTGG domains
           [Alicyclobacillus acidocaldarius LAA1]
 gi|218241155|gb|EED08331.1| putative signal-transduction protein with CBS and DRTGG domains
           [Alicyclobacillus acidocaldarius LAA1]
          Length = 435

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    +     ++ E     + VVD   +L GII+  D+            V   M +NP
Sbjct: 204 RPDDTVRKYYHLVEESGHSRMPVVDANGRLVGIISPRDVAEA----ELDAPVSRYMTRNP 259

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   T +  A   +      ++ VV D    IG++   D++R 
Sbjct: 260 VSVTPKTTIASAAHRMAFEGFEIMPVVKDKD-VIGVITRQDVIRA 303



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 274 RNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KD+  L VEDV+   P   +  D  +     L+ +   S + VVD   + +GI+  
Sbjct: 182 RLIKKDI--LYVEDVLQNQPLVSLRPDDTVRKYYHLVEESGHSRMPVVDANGRLVGIISP 239

Query: 333 LDLLRF 338
            D+   
Sbjct: 240 RDVAEA 245


>gi|149922478|ref|ZP_01910910.1| acetoin utilization protein AcuB [Plesiocystis pacifica SIR-1]
 gi|149816673|gb|EDM76165.1| acetoin utilization protein AcuB [Plesiocystis pacifica SIR-1]
          Length = 141

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 53/123 (43%), Gaps = 19/123 (15%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----------------RNF 276
                + +A+ +L +     + VV++   L GI+++ D+                  R+ 
Sbjct: 15  PPTATVREALRLLEDSDIRHLPVVND-GHLIGIVSDRDLREYRVPLLLEIDHFDEAGRDR 73

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDL 335
             DL    V DVM  +   +     +   +  + ++ +  + V+D + +  +GIV ++D+
Sbjct: 74  ANDLLDTRVADVMAADVVSVDNTESIASVLDAMIEYKVGAVPVIDPESEDLVGIVSYIDV 133

Query: 336 LRF 338
           LR+
Sbjct: 134 LRY 136



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +S++ VM  +         +  A++LL   +I  L VV+D    IGIV   DL
Sbjct: 1   MSLDAVMTTDLITAPPTATVREALRLLEDSDIRHLPVVND-GHLIGIVSDRDL 52


>gi|296131069|ref|YP_003638319.1| putative signal transduction protein with CBS domains [Cellulomonas
           flavigena DSM 20109]
 gi|296022884|gb|ADG76120.1| putative signal transduction protein with CBS domains [Cellulomonas
           flavigena DSM 20109]
          Length = 138

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 50/120 (41%), Gaps = 4/120 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF 276
           +  +          +V++   L      ++ +  G + VV E   + GI+T+ D+  R  
Sbjct: 1   MTRTVSELMTPHPTVVEVTDTLRAVAQTMATQDIGSL-VVAEEGTVVGIVTDRDLVVRGL 59

Query: 277 HKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +     V  +   +   +  D  +   ++++R+  +  + VV +   A+G++   DL
Sbjct: 60  AEGIGLDAPVGQLATDDLLTVGPDDDVADVVRIMREQAVRRVPVV-EGGAAVGVLSIGDL 118



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T +V ++M  +P V+     L    Q +   +I  L VV +    +GIV   DL+  G+
Sbjct: 2   TRTVSELMTPHPTVVEVTDTLRAVAQTMATQDIGSL-VVAEEGTVVGIVTDRDLVVRGL 59


>gi|289434856|ref|YP_003464728.1| DRTGG/CBS domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
 gi|289171100|emb|CBH27642.1| DRTGG/CBS domain protein [Listeria seeligeri serovar 1/2b str.
           SLCC3954]
          Length = 437

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/90 (30%), Positives = 43/90 (47%), Gaps = 4/90 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           E       VV+   +L G++T  DI     K+  ++S+E VM KNP  +     +     
Sbjct: 219 ETGHSRFPVVNRAMRLTGMVTSKDI---LDKN-PSISIERVMTKNPLTVGPKMSVASVAH 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++   +I V+ VV D    IGIV   D+L+
Sbjct: 275 MMIWESIEVIPVVKDDLTLIGIVSRQDILK 304


>gi|239814766|ref|YP_002943676.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
 gi|239801343|gb|ACS18410.1| CBS domain containing membrane protein [Variovorax paradoxus S110]
          Length = 376

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 86/241 (35%), Gaps = 24/241 (9%)

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G +  L A+L +   FS  L    + +  +V           +          P T A  
Sbjct: 127 GGAAALLAVLTHTTHFSSALFPFFTNSLLLVLAGVAYNSLTGRRYPHVQVAQPPRTDARF 186

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH---SGDSIPLVKIGCP 238
             A  DA+     +  + S +D   L    +L +       +            V+ G P
Sbjct: 187 SQADIDAVLARYNQVLDISRDDLESLIQQTELESYKRRLGTLHCGDIMSRDPVSVEFGTP 246

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----------KDLNTLS--- 284
           L +A  +++++R   + V D  +++ GI+T+ D FR              +DL   +   
Sbjct: 247 LQEAWMLMNQRRIKALPVTDRTRRVVGIVTQADFFRQLDLEHHEGIAGRLRDLIRATRTV 306

Query: 285 -------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V  +M +  +V   D  +   + L  +     + ++D  ++  G++   D +R
Sbjct: 307 VSNKPEVVGQIMTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDHEKRLTGMITQSDFVR 366

Query: 338 F 338
            
Sbjct: 367 A 367



 Score = 39.5 bits (91), Expect = 0.75,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 27/56 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
               + +     P++D + + SE     + ++D  ++L G+IT+ D  R  ++ + 
Sbjct: 318 MTRQVRVASADRPVVDLVPLFSEGGHHHIPIIDHEKRLTGMITQSDFVRALYRAVR 373


>gi|295705085|ref|YP_003598160.1| 6-phospho 3-hexuloisomerase domain-containing protein [Bacillus
           megaterium DSM 319]
 gi|294802744|gb|ADF39810.1| 6-phospho 3-hexuloisomerase domain protein [Bacillus megaterium DSM
           319]
          Length = 182

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/149 (19%), Positives = 57/149 (38%), Gaps = 11/149 (7%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G G+SG +G   A  L   G   + V            I   D+++ +S SG + 
Sbjct: 35  RIFVIGEGRSGLMGKSFAMRLMHLGATVYVVGETITP-----SIAAGDVLVAVSGSGKTQ 89

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA----PTTSAIM 181
           ++ ++   A+     +I I++  +S +  H D +L +P   +      A    P  S   
Sbjct: 90  QVVSVAKKAKEVGCSVIGISASTESPLTAHTDELLHIPAATKYRSENEAASIQPLGSLFD 149

Query: 182 Q--LAIGDALAIALLESRNFSENDFYVLH 208
           Q    + D + +      +      +  H
Sbjct: 150 QCAHVVFDTICLEYGNLNHTDHEQAFKQH 178


>gi|150399318|ref|YP_001323085.1| CBS domain-containing protein [Methanococcus vannielii SB]
 gi|150012021|gb|ABR54473.1| CBS domain containing protein [Methanococcus vannielii SB]
          Length = 279

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 47/125 (37%), Gaps = 2/125 (1%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                +  S      D++  V+    L + I +   K+ G V VVD+   L   I E D+
Sbjct: 75  NMISAINESVKEIMTDNVVFVRENAELEEVIDLFVSKKIGGVPVVDKSGILISTINERDV 134

Query: 273 FRNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +     +   + V D M +          L    + + ++    L VV +  K +GI+ 
Sbjct: 135 IKYLEDSIYKNILVRDCMTEKVVCATPGERLKDVARTMLRNGFRRLPVVFEE-KLVGIIT 193

Query: 332 FLDLL 336
             D +
Sbjct: 194 STDFI 198



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 55/129 (42%), Gaps = 17/129 (13%)

Query: 223 VMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD- 279
           ++    +  +V    G  L D    +    F  + VV E  KL GIIT  D       D 
Sbjct: 147 LVRDCMTEKVVCATPGERLKDVARTMLRNGFRRLPVVFEE-KLVGIITSTDFISLLGSDW 205

Query: 280 ------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                       +  L ++++M K+   I  D  L  A++++ + +I VL VV + +  I
Sbjct: 206 AFNNMKTGNIREITNLRIQEIMKKDVLSISPDMKLFDAVKVMSEKDIGVLPVV-EGEMLI 264

Query: 328 GIVHFLDLL 336
           GI+   D++
Sbjct: 265 GILTEKDVV 273



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 49/123 (39%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLN---------- 281
           V     +I+A+ ++++     + VV  G  +++GI+T  DI                   
Sbjct: 15  VYPTTKIIEALEMMNKNHVRRIPVVAPGTGRVEGILTNMDIVNLMGGGSKYNLVKFKHEY 74

Query: 282 ------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                   SV+++M  N   + E+  L   + L     I  + VVD     I  ++  D+
Sbjct: 75  NMISAINESVKEIMTDNVVFVRENAELEEVIDLFVSKKIGGVPVVDKSGILISTINERDV 134

Query: 336 LRF 338
           +++
Sbjct: 135 IKY 137


>gi|46200275|ref|YP_005942.1| CBS domain-containing protein [Thermus thermophilus HB27]
 gi|46197903|gb|AAS82315.1| cbs domain proteins [Thermus thermophilus HB27]
          Length = 315

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +A  +++++R G + VV E  ++ G++T  D+       L    V
Sbjct: 1   MVPDPFRVGPWTSVREAARLMAQRRVGSLVVV-EDGQVLGVVTSRDLRGAHPNRL----V 55

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            DV+   P  I  +  L  A +L+    +  L+V+   +K +GI+ 
Sbjct: 56  VDVLKGPPVAISPEASLLEAKRLMEAKGLERLLVM-RDRKLLGILT 100



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 1/47 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M+ +P  +   T +  A +L+ Q  +  L+VV +  + +G+V   DL
Sbjct: 1   MVPDPFRVGPWTSVREAARLMAQRRVGSLVVV-EDGQVLGVVTSRDL 46


>gi|317470721|ref|ZP_07930106.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
 gi|316901856|gb|EFV23785.1| 6-phospho 3-hexuloisomerase [Anaerostipes sp. 3_2_56FAA]
          Length = 177

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 70/175 (40%), Gaps = 10/175 (5%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  LE S      +Q    + KIK+ K R+ + G G+SG +   LA  L   G  ++ V 
Sbjct: 5   IKELEQSADRVPEYQISDLIRKIKSHK-RIFVYGTGRSGLMLKALAMRLMQIGLDAYVVG 63

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC--H 155
                      + + DL+IV S SG +  +      A++    LI I+S  +S +     
Sbjct: 64  ETTTP-----SVEKGDLLIVASASGETGSVCMTAQSAKKQGADLIVISSAAESTLGKIQT 118

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
            DI++    +  +    + P  S   Q+   + D   + +      S +D    H
Sbjct: 119 PDIMIESATKFTTSKTSIQPLGSLFEQMLLIVFDDAVLEMSREEPGSNDDMAKRH 173


>gi|302562258|ref|ZP_07314600.1| oxidoreductase [Streptomyces griseoflavus Tu4000]
 gi|302479876|gb|EFL42969.1| oxidoreductase [Streptomyces griseoflavus Tu4000]
          Length = 143

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 48/107 (44%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFH--KDLNTLSVEDVM 289
           V+    +  A  ++ E+  G V V      L G++T+ DI  R     +D    +V  + 
Sbjct: 18  VEPMTTVARAARLMRERDIGDVLV-AYDCDLFGVLTDRDIVLRGVAEGRDPEATTVGSLC 76

Query: 290 IKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + P   +  +     A++L+R++ +  L VV+     +G+V   DL
Sbjct: 77  TRPPLVTLDPEDTTDHAVELMREYAVRRLPVVEHGGCPVGMVSLGDL 123



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 1/59 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           T  + DVM  +   +   T +  A +L+R+ +I  ++V  DC    G++   D++  G+
Sbjct: 4   TTRIRDVMSADTASVEPMTTVARAARLMRERDIGDVLVAYDCD-LFGVLTDRDIVLRGV 61


>gi|294619109|ref|ZP_06698604.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1679]
 gi|291594770|gb|EFF26152.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecium E1679]
          Length = 282

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE +++ +  V + G+G S  +   +    +  G P  F    
Sbjct: 105 AIKETVDILEEETIQKVVECLESAET-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 163

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 164 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKSMNIEIIALTQFGNNPLSKIADVL 223

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 224 VQTS-RPKEITNRSAATNSFLAQFATIDII 252


>gi|76802799|ref|YP_330894.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558664|emb|CAI50256.1| CBS domain protein 6 [Natronomonas pharaonis DSM 2160]
          Length = 144

 Score = 71.5 bits (174), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 4/104 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     L DA T L+E+  G + V     +L+GIITE DI     ++L+    V ++M  
Sbjct: 19  IAPDASLADAATRLTEQSIGSLVV--GEGQLRGIITESDIVTAVSEELDPETPVTELMSD 76

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               I     L  A + +  + +  L VV +   AIGI+   DL
Sbjct: 77  PVVTIRRTETLQAAAERMGHNGVKKLPVV-EGGSAIGIITTTDL 119



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 2/58 (3%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +VE +M    + I  D  L  A   L + +I  L+V     +  GI+   D++  
Sbjct: 4   HDTNVESLMTSPVETIAPDASLADAATRLTEQSIGSLVV--GEGQLRGIITESDIVTA 59


>gi|296110304|ref|YP_003620685.1| KpsF/GutQ [Leuconostoc kimchii IMSNU 11154]
 gi|295831835|gb|ADG39716.1| KpsF/GutQ [Leuconostoc kimchii IMSNU 11154]
          Length = 81

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/76 (38%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A ++   E   L     S++  L   F   VE I A KGR +  GIGKSG I  K+A+
Sbjct: 6   DDAKKTFELEIDAL----KSVRETLDEHFDAVVETILANKGRTIFIGIGKSGIIAEKIAA 61

Query: 85  TLASTGTPSFFVHAAE 100
           +L+S G  SFF+ A  
Sbjct: 62  SLSSVGVSSFFIDAGT 77


>gi|163736598|ref|ZP_02144017.1| CBS domain protein [Phaeobacter gallaeciensis BS107]
 gi|163742756|ref|ZP_02150141.1| CBS domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161384011|gb|EDQ08395.1| CBS domain protein [Phaeobacter gallaeciensis 2.10]
 gi|161390468|gb|EDQ14818.1| CBS domain protein [Phaeobacter gallaeciensis BS107]
          Length = 144

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 20/109 (18%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           +     + +A  +L + + G V V  +G+  +GI++E DI R   +      + +  + M
Sbjct: 18  IAPEATISEAAKLLGDHKIGTVVVSSDGETAEGILSERDIVRELARSGSGCLSKATSEYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +        + +   ++ + +     + VV +  K IG+V   D+++ 
Sbjct: 78  TRKLVTCTSQSNVEDVLKQMTEGRFRHMPVV-EDGKLIGLVSLGDVVKA 125



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  I  +  ++ A +LL  H I  ++V  D + A GI+   D++R 
Sbjct: 11  ASSGVVTIAPEATISEAAKLLGDHKIGTVVVSSDGETAEGILSERDIVRE 60


>gi|67926212|ref|ZP_00519431.1| CBS [Crocosphaera watsonii WH 8501]
 gi|67851945|gb|EAM47485.1| CBS [Crocosphaera watsonii WH 8501]
          Length = 123

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 32/55 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +V  VM ++P  +   T L+ A++++ +  IS L VVD+  K +G++   DL+
Sbjct: 2   AKTVAQVMTQDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLM 56



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 38/105 (36%), Gaps = 29/105 (27%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                  V    PL +A+ I++EKR   + VVDE  KL G+I+E D+             
Sbjct: 9   MTQDPITVTPQTPLSEAVKIIAEKRISGLPVVDEKGKLLGVISETDLMWQETGVEPPPYI 68

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
                           +  HK L   +V +VM   P  I     L
Sbjct: 69  MILDSVIYLQNPARHDKEIHKALGQ-TVGEVMSDKPISIKATQSL 112


>gi|325521868|gb|EGD00587.1| CBS domain-containing protein [Burkholderia sp. TJI49]
          Length = 143

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAQLMERYDIGALPVCD-NNRLVGMVTDRDLTVRALSAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++V    P     +D  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RIQEVAS-GPIEWCFDDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M ++   I     +  A QL+ +++I  L V D+  + +G+V   DL 
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAQLMERYDIGALPVCDN-NRLVGMVTDRDLT 54


>gi|53805171|ref|YP_113099.1| CBS domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53758932|gb|AAU93223.1| CBS domain protein [Methylococcus capsulatus str. Bath]
          Length = 150

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 52/121 (42%), Gaps = 6/121 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIF-RNFHKD 279
                   +V     +++A  ++     G V VV+E +   K  GI+T+ D+      ++
Sbjct: 5   QFCIRDTVIVDKDDTIVEAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLVVEILAEE 64

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  + ++V DVM        E   L   +Q +R H +  + VVD+    +GI+   D L 
Sbjct: 65  VAPDAVTVGDVMSFELVTAQEQDGLWETLQRMRAHGVRRIPVVDERGLLVGIISADDYLE 124

Query: 338 F 338
            
Sbjct: 125 I 125



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLL 336
           +S+    I++  ++ +D  +  A +++R H++  ++VV++ +   K +GI+   DL+
Sbjct: 1   MSIGQFCIRDTVIVDKDDTIVEAAKVMRAHHVGSVVVVEEAEGGCKPLGILTDRDLV 57


>gi|258512319|ref|YP_003185753.1| putative signal transduction protein with CBS and DRTGG domains
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
 gi|257479045|gb|ACV59364.1| putative signal transduction protein with CBS and DRTGG domains
           [Alicyclobacillus acidocaldarius subsp. acidocaldarius
           DSM 446]
          Length = 435

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 40/105 (38%), Gaps = 5/105 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    +     ++ E     + VVD   +L GII+  D+            V   M +NP
Sbjct: 204 RPDDTVRKYYHLVEESGHSRMPVVDANGRLVGIISPRDVAEA----ELDAPVSRYMTRNP 259

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   T +  A   +      ++ VV D    IG++   D++R 
Sbjct: 260 VSVTPKTTIASAAHRMAFEGFEIMPVVKDKD-VIGVITRQDVIRA 303



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 3/66 (4%)

Query: 274 RNFHKDLNTLSVEDVMIKNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R   KD+  L VEDV+   P   +  D  +     L+ +   S + VVD   + +GI+  
Sbjct: 182 RLIKKDI--LYVEDVLQNQPLVSLRPDDTVRKYYHLVEESGHSRMPVVDANGRLVGIISP 239

Query: 333 LDLLRF 338
            D+   
Sbjct: 240 RDVAEA 245


>gi|227550588|ref|ZP_03980637.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecium TX1330]
 gi|227180296|gb|EEI61268.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Enterococcus faecium TX1330]
          Length = 286

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 64/150 (42%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE ++  +  V + G+G S  +   +    +  G P  F    
Sbjct: 109 AIKETVDILEEETIQKVVECLETAES-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 167

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 168 HVLLPQLVSNEKKKVLWLVSNSGRSTDVVALAELAKNMNIEIIALTQFGNNPLSKIADVL 227

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 228 VQTS-RPKEITNRSAATNSLLAQFATIDII 256


>gi|226948352|ref|YP_002803443.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
 gi|226843963|gb|ACO86629.1| CBS domain protein [Clostridium botulinum A2 str. Kyoto]
          Length = 126

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               + ++     +  A+ +++E       V DE   L G+I + DI+R        +T 
Sbjct: 6   MNTHVIVLNPKDSIKKALNLMNENNINGAPVADEESNLIGMIVKADIYRFLMEEGHYDTC 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            VE VM K      E+  +    + +   +I  + +VD  +K +GIV   D+L+
Sbjct: 66  PVEWVMTKEVFTASEEEDIISIAEKILDKDIIAMPIVDSSKKLLGIVSVEDILK 119



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+M  +  V+     +  A+ L+ ++NI+   V D+    IG++   D+ RF
Sbjct: 4   DIMNTHVIVLNPKDSIKKALNLMNENNINGAPVADEESNLIGMIVKADIYRF 55


>gi|314939206|ref|ZP_07846460.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a04]
 gi|314942549|ref|ZP_07849385.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133C]
 gi|314948403|ref|ZP_07851792.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0082]
 gi|314951257|ref|ZP_07854312.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133A]
 gi|314991680|ref|ZP_07857150.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133B]
 gi|314996806|ref|ZP_07861819.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a01]
 gi|313589101|gb|EFR67946.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a01]
 gi|313593771|gb|EFR72616.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133B]
 gi|313596609|gb|EFR75454.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133A]
 gi|313598685|gb|EFR77530.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133C]
 gi|313641457|gb|EFS06037.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0133a04]
 gi|313645195|gb|EFS09775.1| transcriptional regulator, RpiR family [Enterococcus faecium
           TX0082]
          Length = 286

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 65/150 (43%), Gaps = 2/150 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +++ ++           VE +++ +  V + G+G S  +   +    +  G P  F    
Sbjct: 109 AIKETVDILEEETIQKVVECLESAET-VFLYGVGASSLVVEDILQKWSRVGKPIIFEKDI 167

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L    +  ++ ++S SG S ++ A+   A+  +I +IA+T    + ++  AD++
Sbjct: 168 HVLLPQLVSNEKKKVLWLVSNSGRSADVVALAELAKSMNIEIIALTQFGNNPLSKIADVL 227

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     P+   +  A T S + Q A  D +
Sbjct: 228 VQTS-RPKEITNRSAATNSLLAQFATIDII 256


>gi|188588412|ref|YP_001922049.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum E3 str. Alaska E43]
 gi|188498693|gb|ACD51829.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum E3 str. Alaska E43]
          Length = 375

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 47/106 (44%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D+         L+  +  +   +   + V+D+   L GI+T   I  N  +   ++ V
Sbjct: 254 MIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVTAKQIQNNTDR---SVPV 310

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E++M  +      D  +   ++L++++ IS L VVD+     GI+ 
Sbjct: 311 ENIMNSDFIKASPDDTIIDILELVKENKISRLPVVDEGGCLRGIIT 356



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V+D+MI NP    ++  L   ++ +R   +  LMV+D     +GIV 
Sbjct: 249 KVKDIMIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVT 296



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 23/64 (35%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                              +ID + ++ E +   + VVDEG  L+GIIT+  +     + 
Sbjct: 308 VPVENIMNSDFIKASPDDTIIDILELVKENKISRLPVVDEGGCLRGIITKSSLVTTLSQQ 367

Query: 280 LNTL 283
               
Sbjct: 368 FLDT 371


>gi|51597055|ref|YP_071246.1| rpiR family transcriptional regulatory protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|153948582|ref|YP_001400276.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           IP 31758]
 gi|170023648|ref|YP_001720153.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           YPIII]
 gi|186896139|ref|YP_001873251.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           PB1/+]
 gi|51590337|emb|CAH21975.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|152960077|gb|ABS47538.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           IP 31758]
 gi|169750182|gb|ACA67700.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           YPIII]
 gi|186699165|gb|ACC89794.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           PB1/+]
          Length = 292

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 66/175 (37%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +Q A+ ++++E   L S+ES             V+ ++    R+ I G+G SG     
Sbjct: 110 SKLQSAINNVLSETLNLLSIES---------VEQVVKLLRPAD-RICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A+      
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSGTSAETVQALKLAKEAGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 220 VALTHNMGSRITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|325694403|gb|EGD36314.1| CBS domain protein [Streptococcus sanguinis SK150]
          Length = 209

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDENNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|319786359|ref|YP_004145834.1| signal transduction protein with CBS domains [Pseudoxanthomonas
           suwonensis 11-1]
 gi|317464871|gb|ADV26603.1| putative signal transduction protein with CBS domains
           [Pseudoxanthomonas suwonensis 11-1]
          Length = 142

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 4/93 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V    P+IDA+ ++++K  G V V+  G +L GI++E D  R      +      V  +M
Sbjct: 18  VPPDAPVIDAVRLMADKSIGAVLVM-RGGELAGILSERDYARKIVLQGRSSADTPVRAIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                 +  DT +   MQL+ +  I  L V+ D
Sbjct: 77  TAEVVTVAPDTTVPACMQLVTERRIRHLPVLAD 109


>gi|313639359|gb|EFS04243.1| RpiR family transcriptional regulator [Listeria seeligeri FSL
           S4-171]
          Length = 290

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 48/141 (34%), Gaps = 2/141 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L  +    + KI     R+   G G S  +    +     +G  +     +         
Sbjct: 119 LDSELVTDLAKILYEAERIDFYGCGISNLVAQDFSYRFFRSGKNTSAFADSHMQISQAQQ 178

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
                + + +S+ G + E+   L  A++     I+ TSE  + +A  A   +T       
Sbjct: 179 SGAGCVAVGISYGGETQEVITALEIAQQLGAYTISFTSEADNSLAQVAACNIT--VAQIE 236

Query: 169 CPHGLAPTTSAIMQLAIGDAL 189
            P G     S I  L + D +
Sbjct: 237 HPEGYVAGASRIEMLHVMDII 257


>gi|254248274|ref|ZP_04941594.1| hypothetical protein BCPG_03101 [Burkholderia cenocepacia PC184]
 gi|124874775|gb|EAY64765.1| hypothetical protein BCPG_03101 [Burkholderia cenocepacia PC184]
          Length = 425

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------NFHKDLNT 282
           V     +  A+T+L   R   + VVD+  +L GI+T  D+ R               L  
Sbjct: 293 VAPSTSVAAALTLLDRHRVKALPVVDDEGRLIGIVTRADLTRPPRRPAPLWQRLSARLPQ 352

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + E   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 353 SFGGRPASVASVMTRDVASVPETLPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 412



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L   D+M K+   +   T +  A+ LL +H +  L VVDD  + IGIV  
Sbjct: 270 MQAYTRTFGQLKCADLMTKHAIEVAPSTSVAAALTLLDRHRVKALPVVDDEGRLIGIVTR 329

Query: 333 LDLLR 337
            DL R
Sbjct: 330 ADLTR 334



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 372 VPETLPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTQMLEAA 425


>gi|325960241|ref|YP_004291707.1| 6-phospho 3-hexuloisomerase [Methanobacterium sp. AL-21]
 gi|325331673|gb|ADZ10735.1| 6-phospho 3-hexuloisomerase [Methanobacterium sp. AL-21]
          Length = 204

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 62/164 (37%), Gaps = 20/164 (12%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I      V + G G+SG +    A  L   G   + V            I  +D ++ +S
Sbjct: 42  ILTSSKNVFLLGQGRSGLVARAFAMRLMHLGISVYVVGETITP-----AIGEEDCLLAIS 96

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT-------------LPKEP 166
            SG +  + +    A++    ++A+TS  KS +   +D+++              + ++ 
Sbjct: 97  GSGETSYIISTAMIAKKRGAKIVAVTSYEKSTLGTISDLIMHIKGRTKVDSEKNYIKRQM 156

Query: 167 ESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
                 L+P  +      L   DAL   L++    +E+D    H
Sbjct: 157 NGKHLSLSPLGTLFEVSTLIFLDALIAQLMDKMGKTEDDLKKRH 200


>gi|302038083|ref|YP_003798405.1| hypothetical protein NIDE2775 [Candidatus Nitrospira defluvii]
 gi|300606147|emb|CBK42480.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 144

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 47/114 (41%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
                  +     +  A   + + R G + +  +G+ + GI+T+ D+ R      +D++ 
Sbjct: 8   MNKKPQSIGPTTSIRGAAKKMRDLRVGSLLIK-KGKNIVGIVTDTDLVRKGLATSQDVSK 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+VE +M      I  +  +  A  ++    +  L V       +G+V   DLL
Sbjct: 67  LTVEKIMTTPLCTIESNQAVDDAQDMMGDLGVRHLAVT-KGGSIVGVVSVRDLL 119



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            S+  +M K P+ I   T +  A + +R   +  L++    +  +GIV   DL+R G+
Sbjct: 2   ASIAQIMNKKPQSIGPTTSIRGAAKKMRDLRVGSLLI-KKGKNIVGIVTDTDLVRKGL 58


>gi|291532455|emb|CBL05568.1| Transcriptional regulators [Megamonas hypermegale ART12/1]
          Length = 283

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 6/163 (3%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +L+     Q   AV+ IK    ++ + G G S  +   + +     G P    +   
Sbjct: 110 LQDTLKLIDFEQLEKAVQLIKNAH-QICVYGFGNSFTVCQDIETRFMRFGIPIKAYNDLH 168

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  ++T  DLII +S +G++ +L   +  A   ++P+IAITS   S +   AD+VL
Sbjct: 169 MQVTASSLLTEKDLIICVSHTGANIDLLQAIELAHNNNVPIIAITSYMNSPLCKLADVVL 228

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES---RNFS 200
                     +      S ++ +AI D L + + +    +NF+
Sbjct: 229 --HGMGREIAYKSEAVASRLIHMAIVDILYMGVYQKNVTKNFT 269


>gi|320012121|gb|ADW06971.1| CBS domain containing membrane protein [Streptomyces flavogriseus
           ATCC 33331]
          Length = 209

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 16/128 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
              +   V       + + +L+  +   + V+    ++ G+++E D+     +  +    
Sbjct: 12  MTHTPVAVGSQASYKEIVQLLNRWKVSALPVLAGEGRVIGVVSEADLLPKEARRPDEGAA 71

Query: 283 -------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                        +  ED+M      +  D  L  A +++ +  +  L VVD      GI
Sbjct: 72  PANAPTDAAKAGAVRAEDLMSSPAITVHADAPLAEAARIMARRRVKRLPVVDGGGLLEGI 131

Query: 330 VHFLDLLR 337
           +   DLL+
Sbjct: 132 ISRGDLLK 139



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 18/67 (26%), Positives = 29/67 (43%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                        V    PL +A  I++ +R   + VVD G  L+GII+ GD+ + F + 
Sbjct: 85  VRAEDLMSSPAITVHADAPLAEAARIMARRRVKRLPVVDGGGLLEGIISRGDLLKVFLRS 144

Query: 280 LNTLSVE 286
              +  E
Sbjct: 145 DEDIGAE 151



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M   P  +         +QLL +  +S L V+    + IG+V   DLL
Sbjct: 8   VSDLMTHTPVAVGSQASYKEIVQLLNRWKVSALPVLAGEGRVIGVVSEADLL 59


>gi|170702038|ref|ZP_02892955.1| CBS domain containing membrane protein [Burkholderia ambifaria
           IOP40-10]
 gi|170133048|gb|EDT01459.1| CBS domain containing membrane protein [Burkholderia ambifaria
           IOP40-10]
          Length = 391

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDNRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVAAALTLLERHRVKALPVVDGDNRLIGIVTRADLTRQARRPTPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPPSVATVMTRDVASVPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 338 VPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYRQTQMLEAA 391


>gi|157151358|ref|YP_001450110.1| CBS domain-containing protein [Streptococcus gordonii str. Challis
           substr. CH1]
 gi|157076152|gb|ABV10835.1| CBS domain protein [Streptococcus gordonii str. Challis substr.
           CH1]
          Length = 212

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSYIQDAIITLFMYDADVLYVIDEEKLLLGIMSRKDLLRASLNS 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++N+  V   M + P  K   ++  +  A  LL+ + I  L +VD+    K +G V 
Sbjct: 134 NINSTPVAVCMTRMPHIKTCHKNMNILEAAALLQDYAIDSLPIVDEENERKILGSVT 190



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSYIQDAIITLFMYDADVLYVIDEEKLLLGIM 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|330828793|ref|YP_004391745.1| HTH-type transcriptional regulator HexR [Aeromonas veronii B565]
 gi|328803929|gb|AEB49128.1| HTH-type transcriptional regulator HexR [Aeromonas veronii B565]
          Length = 287

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I     ++   G+G S  +     +       P                 +  D+++++S
Sbjct: 127 ILTQSKKISFFGLGASSAVARDAQNKFFRFNIPVVSFDDIVMMRMSCINSSEGDVVVLIS 186

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  I   AR     +I +T++  S +A   ++VL++    ++  +   P  S 
Sbjct: 187 HTGRTKALVEIAALARENDATVIGMTAK-DSPLARECNLVLSMDVPEDTDVY--MPMASR 243

Query: 180 IMQLAIGDALAIALLESRNFS 200
           I QLA+ D LA      R   
Sbjct: 244 IAQLALVDVLATGFTLRRGMK 264


>gi|299482788|gb|ADJ19199.1| Lea6 [Escherichia coli]
          Length = 349

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVED 287
              L+     +  A+ I++        V  E   L G +T+GDI R   ++L+   +VE 
Sbjct: 6   KKVLLTPAATIRQALEIINRGSLQIALVSSEN-TLLGSVTDGDIRRGLLRNLSLDDAVEK 64

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VM  +P            + LL+ + I+ + +  +  + IG+    +LL+  
Sbjct: 65  VMNTSPLTADVSLPKDELLLLLKANKITAIPIT-ENGQLIGLKTLHELLKSK 115


>gi|224371081|ref|YP_002605245.1| AcuB3 [Desulfobacterium autotrophicum HRM2]
 gi|223693798|gb|ACN17081.1| AcuB3 [Desulfobacterium autotrophicum HRM2]
          Length = 225

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 52/124 (41%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  V+    L+D   +   K    V V+D+  ++ GI+T+GDI +       +L +
Sbjct: 7   MSKPVVTVEKDASLMDVSDLFKTKIISMVPVMDD-GRIIGIVTDGDIKKASPSKATSLDI 65

Query: 286 EDVMI-----------KNP-KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            ++M             +P   I  +  +  A   +  +NIS + V+ D  K  GI+   
Sbjct: 66  YELMTLVRKIKITSLMSSPVITIPGNFTVDEAAAKMLANNISGMPVMGDNGKMEGIITKS 125

Query: 334 DLLR 337
           D+ R
Sbjct: 126 DIFR 129



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  M K    + +D  L     L +   IS++ V+DD  + IGIV   D+ + 
Sbjct: 3   IKRWMSKPVVTVEKDASLMDVSDLFKTKIISMVPVMDD-GRIIGIVTDGDIKKA 55



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 25/64 (39%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L TL             +  +     + +A   +       + V+ +  K++GIIT+ DI
Sbjct: 68  LMTLVRKIKITSLMSSPVITIPGNFTVDEAAAKMLANNISGMPVMGDNGKMEGIITKSDI 127

Query: 273 FRNF 276
           FR  
Sbjct: 128 FRCL 131


>gi|117621239|ref|YP_855889.1| DNA-binding transcriptional regulator HexR [Aeromonas hydrophila
           subsp. hydrophila ATCC 7966]
 gi|117562646|gb|ABK39594.1| transcriptional regulator HexR [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
          Length = 287

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I     ++   G+G S  +     +       P                 +  D+++++S
Sbjct: 127 ILTQSKKISFFGLGASSAVARDAQNKFFRFNIPVVSFDDIVMMRMSCINSSEGDVVVLIS 186

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  I   AR     +I +T++  S +A   ++VL++    ++  +   P  S 
Sbjct: 187 HTGRTKALVEIAALARENDATVIGMTAK-DSPLARECNLVLSMDVPEDTDVY--MPMASR 243

Query: 180 IMQLAIGDALAIALLESRNFS 200
           I QLA+ D LA      R   
Sbjct: 244 IAQLALVDVLATGFTLRRGMK 264


>gi|26987767|ref|NP_743192.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas putida KT2440]
 gi|148546314|ref|YP_001266416.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas putida F1]
 gi|325273800|ref|ZP_08139988.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas sp. TJI-51]
 gi|24982460|gb|AAN66656.1|AE016293_6 inosine-5-monophosphate dehydrogenase [Pseudomonas putida KT2440]
 gi|148510372|gb|ABQ77232.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas putida F1]
 gi|313497397|gb|ADR58763.1| GuaB [Pseudomonas putida BIRD-1]
 gi|324101059|gb|EGB98717.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas sp. TJI-51]
          Length = 489

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 61/172 (35%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    + V+      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQAGEVRKVKKFEAGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSE-KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             +     + D +  L+       V V+     L GI+T  D+     ++     V DVM
Sbjct: 98  ITIDADATVRD-LFELTRLNNISGVPVL-ANGDLVGIVTSRDVRF---ENRLDAKVRDVM 152

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                   + E        +LL +H +  +++VDD     G++   D+ +  
Sbjct: 153 TPKERLVTVREGADKNEVRELLHKHRLEKVLIVDDKFNLKGMMTVKDIEKAK 204


>gi|328952455|ref|YP_004369789.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452779|gb|AEB08608.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 151

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/141 (17%), Positives = 50/141 (35%), Gaps = 30/141 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              ++  V     ++D   +L++ +     VVD+  +L G+IT+ D+             
Sbjct: 8   MTKTVITVTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLIDRAKKFQLPHVV 67

Query: 273 ---------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           +N  K L    V DVM      I  +  +     ++   N   L
Sbjct: 68  TILDAHFYLERPSTFRKNLEKMLGN-QVADVMTAPAITITPELSVDEVATIMAHRNAHTL 126

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            V+      +G++  +D++R 
Sbjct: 127 PVL-QDGNLVGVIGKIDIIRA 146



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L   D+M K    +   T +    +LL QH I+   VVDD  + +G++   DL+
Sbjct: 2   LQARDIMTKTVITVTPQTSVLDLARLLAQHKINGTPVVDDDGRLVGVITQTDLI 55


>gi|221209916|ref|ZP_03582897.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD1]
 gi|221170604|gb|EEE03070.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD1]
          Length = 399

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 31/65 (47%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +  A+ LL +H +  L VVD   +  GIV  
Sbjct: 244 MQAYARTFGQLTCADLMTKNAISIAPSTSIAAALTLLDRHRVKALPVVDADGRLTGIVTR 303

Query: 333 LDLLR 337
            DL R
Sbjct: 304 ADLTR 308



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------NFHKDLNT---- 282
           +     +  A+T+L   R   + VVD   +L GI+T  D+ R         + L+     
Sbjct: 267 IAPSTSIAAALTLLDRHRVKALPVVDADGRLTGIVTRADLTRPQRRPAALWQRLSARLPE 326

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 327 SFGGQPPSVSTVMTRDVASVPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 386



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 346 VPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTQLLEAA 399


>gi|84392987|ref|ZP_00991754.1| hypothetical protein V12B01_03743 [Vibrio splendidus 12B01]
 gi|86146305|ref|ZP_01064630.1| hypothetical protein MED222_16376 [Vibrio sp. MED222]
 gi|148981731|ref|ZP_01816507.1| DNA-binding transcriptional regulator HexR [Vibrionales bacterium
           SWAT-3]
 gi|218709822|ref|YP_002417443.1| DNA-binding transcriptional regulator HexR [Vibrio splendidus
           LGP32]
 gi|84376341|gb|EAP93222.1| hypothetical protein V12B01_03743 [Vibrio splendidus 12B01]
 gi|85836016|gb|EAQ54149.1| hypothetical protein MED222_16376 [Vibrio sp. MED222]
 gi|145960754|gb|EDK26092.1| DNA-binding transcriptional regulator HexR [Vibrionales bacterium
           SWAT-3]
 gi|218322841|emb|CAV19018.1| Transcriptional regulator [Vibrio splendidus LGP32]
          Length = 284

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+ +     + Q + AV+ +   K R+   G+G S  +     +       P     
Sbjct: 103 MACLDVAKNSLDAMQVNRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + +D+I+++S +G +     I   AR     +IAIT++  S +   + 
Sbjct: 162 DIVMQRMSCINCSDNDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + ++L    ++  +   P  S ++Q+ + D LA      R 
Sbjct: 221 LSISLDVPEDTDVY--MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|47847750|dbj|BAD21528.1| putative brown planthopper-induced resistance protein 1 [Oryza
           sativa Japonica Group]
 gi|48716345|dbj|BAD22956.1| putative brown planthopper-induced resistance protein 1 [Oryza
           sativa Japonica Group]
 gi|125541636|gb|EAY88031.1| hypothetical protein OsI_09454 [Oryza sativa Indica Group]
 gi|125584159|gb|EAZ25090.1| hypothetical protein OsJ_08882 [Oryza sativa Japonica Group]
 gi|164375547|gb|ABY52941.1| putative brown planthopper-induced resistance protein 1 [Oryza
           sativa Japonica Group]
 gi|215678986|dbj|BAG96416.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694386|dbj|BAG89379.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215701142|dbj|BAG92566.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737624|dbj|BAG96754.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 212

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V+D   +  G+I + D  R  H   +   + +VM      +  D  +  A  L+ + 
Sbjct: 122 GLPVIDASLRCVGVIVKSDRARASHG--SKTKIAEVMTSPAITLPSDKTVMDAAALMLKK 179

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  L +V+  ++ IGIV   D+LR 
Sbjct: 180 KIHRLPIVNQDRQVIGIVTRADVLRE 205



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                ++DA  ++ +K+   + +V++ +++ GI+T  D+ R    
Sbjct: 164 PSDKTVMDAAALMLKKKIHRLPIVNQDRQVIGIVTRADVLRELEA 208


>gi|320101143|ref|YP_004176735.1| 3-hexulose-6-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
 gi|319753495|gb|ADV65253.1| 3-hexulose-6-phosphate isomerase [Desulfurococcus mucosus DSM 2162]
          Length = 201

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/186 (22%), Positives = 72/186 (38%), Gaps = 21/186 (11%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +++     E        ++ +K  + +V I G G+SG +G   A  L   G   + V 
Sbjct: 18  LKAVDLISDEEKEKMISTLIDALKNGR-KVFIIGAGRSGLVGKAFAMRLLHLGFNVYVVG 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   L   ++ D+++ +S SG +  + A    AR   + +IAIT+   S +   AD
Sbjct: 77  ETI-----LPRASQGDVLVSISGSGRTRLVVAAAEAARSVGVKVIAITTYPDSPLGRIAD 131

Query: 158 IVLTLPKEPESCPHG-------------LAPTTSAIMQL--AIGDALAIALLESRNFSEN 202
           IV+ +P   +                  LAP  +          D + + L+E    SE 
Sbjct: 132 IVVKIPGRTKMSSEEDYISRQILGLHEPLAPLGTLFEDTLLLFLDGVVVELMERLGVSEE 191

Query: 203 DFYVLH 208
           D    H
Sbjct: 192 DLRNRH 197


>gi|220910106|ref|YP_002485417.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
 gi|219866717|gb|ACL47056.1| CBS domain containing membrane protein [Cyanothece sp. PCC 7425]
          Length = 154

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 58/140 (41%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +   VK    +   + ++ + R   + VVDE  K+ G+I+EGD+             
Sbjct: 10  MTPNPITVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLLVREAPLQAPLYL 69

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                        +FH+ L     + V+DVM  +P     +T +     L+ + +I  L 
Sbjct: 70  TFLGSVIYFESPESFHQHLKKSLSMLVQDVMTPHPTTTTPETPIADVAHLMVEKHIDRLP 129

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+D   K +GI+   DL+R 
Sbjct: 130 VID-AGKLVGIISRRDLIRA 148



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+D M  NP  +     +   ++L+  H +  L VVD+  K +G++   DLL
Sbjct: 6   VQDFMTPNPITVKPTDSIATVVKLIEDHRVRGLPVVDEDGKVVGMISEGDLL 57



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           + D   ++ EK    + V+D   KL GII+  D+ R     L+
Sbjct: 113 IADVAHLMVEKHIDRLPVIDA-GKLVGIISRRDLIRALKPQLS 154


>gi|315617468|gb|EFU98074.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           3431]
          Length = 275

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 35/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+I+ E + + ++          + H A       + R +  G G S  I +
Sbjct: 88  NKVFNITLRTIM-EGQSIVNV---------DEIHRAARFFYQARQRDLY-GAGGSNAICA 136

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 137 DVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 196

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 197 IICITHSYHSPIAKLADYIICSPAPETPLLGRNA--SARILQLTLLDAFFVSVAQ 249


>gi|313125650|ref|YP_004035920.1| cbs-domain-containing membrane protein [Halogeometricum borinquense
           DSM 11551]
 gi|312292015|gb|ADQ66475.1| CBS-domain-containing membrane protein [Halogeometricum borinquense
           DSM 11551]
          Length = 167

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/144 (19%), Positives = 50/144 (34%), Gaps = 39/144 (27%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           V     + D +  L+   F    VVDE   + GI+T+ D+   F     TL         
Sbjct: 16  VSPDDDVSDVLGRLARADFNGFPVVDEDDHVVGIVTQHDLVGLFETKDRTLWIPIGLPPF 75

Query: 284 ---------------------------SVEDVMIKNPKVILEDTLLTVAMQLL--RQHNI 314
                                       ++ VM  +   +  D  L   + LL   + +I
Sbjct: 76  METVTYAVDISWDDFDLGVDLVKNMDKPIKKVMTPDVVTVEPDADLDAILDLLADDERDI 135

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L V+ +  + +G+V   D++R 
Sbjct: 136 NRLPVI-EDGRLVGVVARQDVIRA 158



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 28/55 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            LS  D+M ++ + +  D  ++  +  L + + +   VVD+    +GIV   DL+
Sbjct: 2   QLSARDLMTEDVETVSPDDDVSDVLGRLARADFNGFPVVDEDDHVVGIVTQHDLV 56


>gi|291288630|ref|YP_003505446.1| Cl- channel voltage-gated family protein [Denitrovibrio acetiphilus
           DSM 12809]
 gi|290885790|gb|ADD69490.1| Cl- channel voltage-gated family protein [Denitrovibrio acetiphilus
           DSM 12809]
          Length = 595

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 13/218 (5%)

Query: 127 LKAILYYA-RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT---TSAIMQ 182
           L + + +        +I   +   S +A      + +  E     H L P+   ++    
Sbjct: 363 LNSFVPFIAPEPGAYVIVGMAGFFSGIANTPLSTIIMVSEMTGNYHLLVPSMWVSTLAFL 422

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           L     + +  +  R+ S      +H G     +               ++K      D 
Sbjct: 423 LLRKTTMYVNQVPMRSESP-----IHKGEFFVQVLQDIKVADVMRPDPIILKEDMHFYDI 477

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSV-EDVMIKNPKVILEDT 300
           +  + + +     VV E   L G++   +I    F + L  L V E+V   +   I    
Sbjct: 478 LHFIPQTKHNNFPVVKEDGTLVGVLLFEEIREFVFEEGLEDLVVAEEVCETDVPTIRPSN 537

Query: 301 LLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLL 336
            L  A++ +   NI +L VVD+    K +GI+   D++
Sbjct: 538 SLADAIENIGFKNIELLPVVDEETQTKLVGIITRRDII 575



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFH 277
                     +P ++    L DAI  +  K    + VVDE    KL GIIT  DI   ++
Sbjct: 520 VVAEEVCETDVPTIRPSNSLADAIENIGFKNIELLPVVDEETQTKLVGIITRRDIISTYN 579

Query: 278 KDLNTLSVEDV 288
           K L     E V
Sbjct: 580 KVLRKRRSEKV 590


>gi|120402412|ref|YP_952241.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
 gi|119955230|gb|ABM12235.1| putative signal-transduction protein with CBS domains
           [Mycobacterium vanbaalenii PYR-1]
          Length = 142

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 55/124 (44%), Gaps = 6/124 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
              A ++MH+G +   V     L +A   ++E   G + V  +  +L G++T+ DI    
Sbjct: 1   MTTAREIMHTGVTC--VGEHETLAEAARRMAELGIGALPVCGDDDRLHGMVTDRDIVIKC 58

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D   ++V ++       +  D      + L+ +H +  L V+DD  + +GIV   
Sbjct: 59  IAAGHDPAAVTVGELAQGGVYHVDADADAQQMLTLMEEHQVRRLPVIDD-HRLVGIVSEA 117

Query: 334 DLLR 337
           D+ R
Sbjct: 118 DVAR 121


>gi|260584393|ref|ZP_05852140.1| transcriptional regulator, RpiR family [Granulicatella elegans ATCC
           700633]
 gi|260157911|gb|EEW92980.1| transcriptional regulator, RpiR family [Granulicatella elegans ATCC
           700633]
          Length = 268

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 70/159 (44%), Gaps = 8/159 (5%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
            V++I + + R+ + G+G SG + + L   L+  G    +   +      L   T  D I
Sbjct: 109 IVQQIHSAR-RIYMFGVGASGMVCNDLYFKLSRIGKNIIYHTDSHIQLASLSGATNQDFI 167

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S+S ++ E+      A+  SIP ++IT      +   +   L +P+   +     + 
Sbjct: 168 IGISYSSNTKEVITAFKIAKELSIPTLSITGIGNQQLDSLSTYQLKIPRHENTIR--SSA 225

Query: 176 TTSAIMQLAIGDALAIALLE---SRNFS--ENDFYVLHP 209
            TS      + D L +ALL+    R+F   E  + + HP
Sbjct: 226 ITSRNDSFFLIDILYLALLQKEEHRHFQNLEKSYRMTHP 264


>gi|258515971|ref|YP_003192193.1| CBS domain-containing membrane protein [Desulfotomaculum
           acetoxidans DSM 771]
 gi|257779676|gb|ACV63570.1| CBS domain-containing membrane protein [Desulfotomaculum
           acetoxidans DSM 771]
          Length = 155

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 27/147 (18%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
               +        +  V     +     +L +     + V+DE  K+ GII+EGD+    
Sbjct: 1   MEKVTVKDIMTKEVIAVGPDDNVEKVARLLLDHNISGLPVIDEKGKVVGIISEGDLIIQE 60

Query: 274 ----------------------RNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                                 R     K +  + V+D+M +    +  +  +     ++
Sbjct: 61  KEIKAPAMTTLLGGVIFLENPNRFLKELKKIIAVEVKDLMTRKVYSVGPEATIAKVTGIM 120

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  I+ + V++D  K +GI+   D++
Sbjct: 121 SEKRINRIPVLNDEGKLLGIITRKDII 147



 Score = 43.0 bits (100), Expect = 0.062,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 24/61 (39%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +           +  V     +     I+SEKR   + V+++  KL GIIT  DI  
Sbjct: 89  KKIIAVEVKDLMTRKVYSVGPEATIAKVTGIMSEKRINRIPVLNDEGKLLGIITRKDIIE 148

Query: 275 N 275
           N
Sbjct: 149 N 149


>gi|160937559|ref|ZP_02084920.1| hypothetical protein CLOBOL_02450 [Clostridium bolteae ATCC
           BAA-613]
 gi|158439628|gb|EDP17378.1| hypothetical protein CLOBOL_02450 [Clostridium bolteae ATCC
           BAA-613]
          Length = 284

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 70/171 (40%), Gaps = 6/171 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           +++S  Q A + + +  + L    S L+ ++   F   VE      GR+   G+G S   
Sbjct: 92  LEDSFSQVAEKVLNSNVKALKETHSLLKEDV---FRRVVECFHKA-GRICFYGVGTSMTT 147

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K A          +    +         ++R ++ ++ S+SG++ +   +   AR+  
Sbjct: 148 AMKAADKFLKIEPKVYCSPDSHMQAMMASTMSRGEVAVIFSYSGATKDTIHVAQLARQAG 207

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             ++ +T   KS +  +AD+ L         P     +++ I QL + D L
Sbjct: 208 AAIVCVTRFIKSPLTAYADLTLLCG--ANESPLQAGSSSAEISQLFLIDML 256


>gi|323486861|ref|ZP_08092179.1| hypothetical protein HMPREF9474_03930 [Clostridium symbiosum
           WAL-14163]
 gi|323690876|ref|ZP_08105170.1| hypothetical protein HMPREF9475_00031 [Clostridium symbiosum
           WAL-14673]
 gi|323399874|gb|EGA92254.1| hypothetical protein HMPREF9474_03930 [Clostridium symbiosum
           WAL-14163]
 gi|323505095|gb|EGB20863.1| hypothetical protein HMPREF9475_00031 [Clostridium symbiosum
           WAL-14673]
          Length = 282

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 70/178 (39%), Gaps = 7/178 (3%)

Query: 17  SLMKNSTVQCALRSIIA-EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           SL +N  V    + I   E   L+   S +          A E I     +V+  G G S
Sbjct: 87  SLEQNDDVMTICKKIFNLEMAALNRTFSLIN---FIDMEAACEAISKAD-KVLAMGSGGS 142

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             +   +   L   G  SF     +       ++T  D+ I +S SGS+  + + L  A 
Sbjct: 143 LIVAKDMQHKLMKIGIQSFVHDDIDLQMMAASLLTEKDVAICISHSGSNRNILSGLKLAH 202

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
                 IA+T + K+ +A  ADI L +  E        A T   I QL++ D++   +
Sbjct: 203 DKGATTIALTGQGKTPIANTADIALYVASEKTMFRSESAST--RIAQLSMIDSMVSII 258


>gi|225575781|ref|ZP_03784391.1| hypothetical protein RUMHYD_03874 [Blautia hydrogenotrophica DSM
           10507]
 gi|225036988|gb|EEG47234.1| hypothetical protein RUMHYD_03874 [Blautia hydrogenotrophica DSM
           10507]
          Length = 282

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/153 (24%), Positives = 61/153 (39%), Gaps = 3/153 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE +L      +   A + I   K RV+  G G S  +G          G   +   
Sbjct: 106 ISVLERTLASLNMREVEKAAQFIFHGK-RVLFFGSGGSLLVGQDALHKFMKIGVQVYVHE 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             +       +    D++I +S SGS+  +   L  A+      IA+ S  K+ ++  AD
Sbjct: 165 DRDLQLMASSLAGEGDVVIGISHSGSNYSVLRCLKNAKENGAQTIALVSRGKTPLSKIAD 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +V+    E           ++ I QLAI D+L 
Sbjct: 225 VVIDTASEET--IFQSESVSTRIAQLAIIDSLV 255


>gi|315230522|ref|YP_004070958.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase /
           6-phospho-3-hexuloisomerase [Thermococcus barophilus MP]
 gi|315183550|gb|ADT83735.1| D-arabino-3-hexulose 6-phosphate formaldehyde lyase /
           6-phospho-3-hexuloisomerase [Thermococcus barophilus MP]
          Length = 435

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 78/214 (36%), Gaps = 24/214 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VTR+   L  +  +Q   +++      +  +  +L+     +    V+ +     ++ I
Sbjct: 227 EVTRRIIDLFWDEYMQTIRKAMHDITEHIDHVADALR---LEEVRGMVDAMIGA-NKIFI 282

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G+SG +G   A  L       + V                DL+I +S SG +  +  
Sbjct: 283 YGAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEEGDLLIAISGSGETRTIVD 337

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPT 176
               A++    ++AITS   S +   AD+V+ +P   ++                 +AP 
Sbjct: 338 AAEIAKKQGGKVVAITSYKNSTLGKLADVVVEIPGRAKTDVPTDYIARQMLTQYKWIAPM 397

Query: 177 TSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +      +   D +   L+ +   +E D    H
Sbjct: 398 GTLFEDSTMVFLDGIIALLMATFQKTEKDMKRKH 431


>gi|256789541|ref|ZP_05527972.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289773430|ref|ZP_06532808.1| oxidoreductase [Streptomyces lividans TK24]
 gi|289703629|gb|EFD71058.1| oxidoreductase [Streptomyces lividans TK24]
          Length = 141

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V+    +  A  ++ E+  G V V      L G++T+ DI        +D    +V  V 
Sbjct: 16  VEPMTTVARAARLMREEDVGDVLVT-YDCDLFGVLTDRDIVLRGVADGRDPEATTVGAVC 74

Query: 290 IKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              P   +  D     A +L+ +H +  L VV+     +G+V   DL
Sbjct: 75  TPPPVVTLEPDDTTDRAAELMARHAVRRLPVVEHGGVPVGVVTLGDL 121


>gi|159905282|ref|YP_001548944.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159886775|gb|ABX01712.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 303

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + +A  +L +     + V+D G+KL G+++  D+     + L   +V  +M + 
Sbjct: 184 ISPEKTIRNAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEAVSRGLENENVTKLMAER 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I ++  +  A+ L+ +HN+  L+V+D+ + A+GI+   D+L
Sbjct: 243 IYTISKNEKIYDALILMEKHNVGRLIVLDNEEYAVGILTRTDIL 286



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 284 SVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV DV IK     I  +  +  A +LL   NIS + V+D  +K +G++   D+   
Sbjct: 171 SVGDVGIKKELIYISPEKTIRNAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEA 225



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/70 (15%), Positives = 25/70 (35%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +       +      + I  +     + DA+ ++ +   G + V+D  +   GI+T  D
Sbjct: 225 AVSRGLENENVTKLMAERIYTISKNEKIYDALILMEKHNVGRLIVLDNEEYAVGILTRTD 284

Query: 272 IFRNFHKDLN 281
           I       + 
Sbjct: 285 ILNLIEGTIF 294


>gi|327459730|gb|EGF06070.1| CBS domain protein [Streptococcus sanguinis SK1057]
          Length = 209

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMASPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDENNERKILGTVT 190



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIM-ASPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|323345875|gb|EGA80216.1| Imd2p [Saccharomyces cerevisiae Lalvin QA23]
          Length = 414

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 6/113 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLS 284
           ++  ++     + +A ++  +  F    V  +G+   KL G++T  DI   F +D ++L 
Sbjct: 14  NNPIVISPTTTVGEAKSMKEKYGFAGFPVTADGKRNAKLVGVVTSRDI--QFVED-SSLL 70

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+DVM KNP    +   L+   ++L++     L+VVD+    + ++   DL++
Sbjct: 71  VQDVMTKNPVTGAQGITLSEGNEILKKIKKGRLLVVDEKGNLVSMLSRTDLMK 123


>gi|309777946|ref|ZP_07672888.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308914235|gb|EFP60033.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 178

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 11/173 (6%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L   L      + +  +E I +   R+   G G+SG +    A  L   G  S+ V  
Sbjct: 10  DNLALILNAISEEEINKLIEAICSA-NRIYCAGCGRSGLMMKAFAMRLMHLGLTSYVVQE 68

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARR-FSIPLIAITSENKSVVACHAD 157
                     I   DL+I+ S SG +  +  I   A++ +   +  +T+  +S ++  AD
Sbjct: 69  TVTP-----SIREGDLLIIGSGSGMTSSMVRIAERAKKEYHANVAVLTANTESRISEAAD 123

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
           I L +P +       + P  +   Q  +   D + I +++  N  E      H
Sbjct: 124 ITLCIPVDKVEKS--VQPGGNLFEQSLLICTDGIIIRIMDKLNIKEAVMDYNH 174


>gi|223983350|ref|ZP_03633537.1| hypothetical protein HOLDEFILI_00817 [Holdemania filiformis DSM
           12042]
 gi|223964684|gb|EEF69009.1| hypothetical protein HOLDEFILI_00817 [Holdemania filiformis DSM
           12042]
          Length = 277

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/181 (17%), Positives = 66/181 (36%), Gaps = 11/181 (6%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + II + + ++ L  +L+          V  +K  + ++++ G G S      +++    
Sbjct: 93  QKIIQQYQKMAQL--TLEFNPPQVIDQTVSALKKAR-KIIVFGFGNSNLFAEYISNQWLK 149

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  SF    +      L      D++ ++S SG + E+      A   ++ +IA+T   
Sbjct: 150 MGLDSFCSANSHIIFSMLSQFGPQDVLFLISESGETPEILKAARIAGHQNVTVIAMTRIQ 209

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           K+ +  ++DIVL       +                    L +  +   N  + DF    
Sbjct: 210 KNRLHGYSDIVLKTVNYETNTRLN--------AMTLRCSQLCLLDMIYLNLYKTDFEHYE 261

Query: 209 P 209
            
Sbjct: 262 K 262


>gi|169831720|ref|YP_001717702.1| cyclic nucleotide-binding protein [Candidatus Desulforudis
           audaxviator MP104C]
 gi|169638564|gb|ACA60070.1| cyclic nucleotide-binding protein [Candidatus Desulforudis
           audaxviator MP104C]
          Length = 634

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 19/131 (14%), Positives = 48/131 (36%), Gaps = 6/131 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                            +        + +   + +E+    V ++D     +GI+T  D+
Sbjct: 149 WEPRHYRRRLYEIMSSPVVTCLEEHRITEVAQLFAEQEISAVVILDRNGTSRGILTAKDL 208

Query: 273 FRNF--HKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            R+     D       S   +M +   ++  +  +  A+  + ++ +  ++V ++    +
Sbjct: 209 VRHVLAASDFERQARRSAAALMNEKLVLLPPEAHIYEALLAMMRNQVRHVLV-ENQGLLL 267

Query: 328 GIVHFLDLLRF 338
           GIV   DL+R 
Sbjct: 268 GIVTMGDLVRA 278



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 45/132 (34%), Gaps = 15/132 (11%)

Query: 176 TTSAIMQLAIGDALAIALLESRN------FSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
             + + QL     ++  ++  RN       +  D                 S      + 
Sbjct: 174 RITEVAQLFAEQEISAVVILDRNGTSRGILTAKDLVRHVLAASDFERQARRSAAALMNEK 233

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL------ 283
           + L+     + +A+  +   +   V V +    L GI+T GD+ R  H D+         
Sbjct: 234 LVLLPPEAHIYEALLAMMRNQVRHVLV-ENQGLLLGIVTMGDLVRAQHLDVLRTVDAVER 292

Query: 284 --SVEDVMIKNP 293
             S+EDV  + P
Sbjct: 293 APSIEDVAARMP 304


>gi|119509031|ref|ZP_01628182.1| two-component hybrid sensor and regulator [Nodularia spumigena
           CCY9414]
 gi|119466197|gb|EAW47083.1| two-component hybrid sensor and regulator [Nodularia spumigena
           CCY9414]
          Length = 1045

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/142 (26%), Positives = 59/142 (41%), Gaps = 25/142 (17%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLI-DAITILSEKRFGC-------------------- 253
           T+     D+  +  S PL+     L  +AI ++S+ R  C                    
Sbjct: 3   TVNSSIIDIEEAIISSPLILTATTLAVEAIRLMSQVRDSCQLANSGLIPSINKLNLEKAS 62

Query: 254 VAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLL 309
             +V + QKL G  TE DI R       L  +++ +VM  NP  + +     + V + L 
Sbjct: 63  CVLVVDNQKLIGTFTERDIVRCTAMEMSLEQVTLAEVMSSNPVTLKKSEFHNIFVVLNLF 122

Query: 310 RQHNISVLMVVDDCQKAIGIVH 331
           RQ+ I  L +VDD    IG+V 
Sbjct: 123 RQYKIRHLSIVDDQGDLIGLVT 144



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 41/103 (39%), Gaps = 6/103 (5%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIF--RNFHKDLNTLSVEDV 288
               ++D   +++E    CV +         +  GI+TE DI   R    D   +    V
Sbjct: 176 PTASILDLAQLMTEHCVSCVVITQSDTEFDSQPIGIVTERDIVQFRALELDPVQIKAHVV 235

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M      +     L  A Q +++  +  L+VV D  + +GIV 
Sbjct: 236 MSSPLFYLRPQQSLWEAHQKMQKLRVRSLVVVGDRNQLLGIVT 278



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 45/103 (43%), Gaps = 6/103 (5%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILED 299
            + +  + +   +++VD+   L G++T   + +       L    VE+VM  +       
Sbjct: 118 VLNLFRQYKIRHLSIVDDQGDLIGLVTPTTLRQLIQVADFLKIRCVEEVMAPDVIQAAPT 177

Query: 300 TLLTVAMQLLRQHNISVLMVVDD----CQKAIGIVHFLDLLRF 338
             +    QL+ +H +S +++         + IGIV   D+++F
Sbjct: 178 ASILDLAQLMTEHCVSCVVITQSDTEFDSQPIGIVTERDIVQF 220


>gi|152995113|ref|YP_001339948.1| DNA-binding transcriptional regulator HexR [Marinomonas sp. MWYL1]
 gi|150836037|gb|ABR70013.1| transcriptional regulator, RpiR family [Marinomonas sp. MWYL1]
          Length = 288

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 40/170 (23%), Positives = 61/170 (35%), Gaps = 7/170 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   A K  L+  +  L   L      AV+ +   + R+   G+G SG +          
Sbjct: 101 KIFEAAKNNLTRAQDILPESL---ISRAVDVLAQAR-RIEFYGLGASGPVAKDAHHKFFR 156

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P                    D I+++S++G +  L      AR     +I IT   
Sbjct: 157 LNMPVVAYTDILVQRMAAAGAHSGDAIVIISYTGRTLPLIETARVAREAGATVIGIT-NP 215

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            S +  H  IVL  P E         P +S I+ L + DALA  +L  R 
Sbjct: 216 DSPLTEHCSIVL--PIEETEDTDIYTPMSSRIVYLTLIDALATGVLLKRG 263


>gi|73668504|ref|YP_304519.1| hypothetical protein Mbar_A0967 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395666|gb|AAZ69939.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 281

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + +V    P+  A  ++   +   + V++E  K+ GI+T+ DI             
Sbjct: 7   MSSPVYVVNTEEPVSRARKLMLRHKISTLLVLNED-KIVGIVTKSDITNRLAQAEPLWRR 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + ++ +M ++   I  +  ++ A  L+ ++ +  + VV +    +GI+   DL+R
Sbjct: 66  RPIDQIPIKLLMTESVISIYPEASISQAAALMLENGVHTIPVVKND--IVGIITRTDLVR 123

Query: 338 F 338
           +
Sbjct: 124 Y 124



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 4/101 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--LSVEDVMI 290
           +     +  A  ++ E     + VV     + GIIT  D+ R   ++       +  +M 
Sbjct: 84  IYPEASISQAAALMLENGVHTIPVV--KNDIVGIITRTDLVRYVAENKEDMKTKISKLMT 141

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++   +     +   +  + ++NI  ++V DD  K +GI+ 
Sbjct: 142 EDIISVHRHHTINHVIDEMNRNNIERVIVKDDAGKPVGIIS 182



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 29/134 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     +   I  ++      V V D+  K  GII+   +  N   D             
Sbjct: 147 VHRHHTINHVIDEMNRNNIERVIVKDDAGKPVGIISSRSLALNLLTDFQGELSMKNIKMT 206

Query: 283 ------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                             L+ ED+MI     I  +  ++ A + + +  ++ L V D   
Sbjct: 207 RKSSPGGQKTYRYVKELPLTAEDIMISPINSIDVNEDVSAAAKKMMEDGVTALPVSDGED 266

Query: 325 KAIGIVHFLDLLRF 338
             +GI+   D+++ 
Sbjct: 267 -IVGILSRTDIMKA 279



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M     V+  +  ++ A +L+ +H IS L+V+++  K +GIV   D+ 
Sbjct: 3   VADIMSSPVYVVNTEEPVSRARKLMLRHKISTLLVLNED-KIVGIVTKSDIT 53


>gi|327310642|ref|YP_004337539.1| 6-phospho-3-hexuloisomerase [Thermoproteus uzoniensis 768-20]
 gi|326947121|gb|AEA12227.1| 6-phospho-3-hexuloisomerase [Thermoproteus uzoniensis 768-20]
          Length = 202

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 36/181 (19%), Positives = 72/181 (39%), Gaps = 20/181 (11%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           + L      +F   +      +  V++ G+G+SG +    A  L   G  S+ +      
Sbjct: 21  NKLDLNSIGKFTDLLVSAYKEERAVLVVGMGRSGLVARGFAMRLRHLGIHSYVLGETITP 80

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 + +DD+++ +S SG++  + A    A++    ++AIT+   S +   ADIV+ +
Sbjct: 81  P-----VDKDDIVVAISGSGTTQIVVAAAEAAKKMGAVVVAITTYPDSPLGKLADIVVFV 135

Query: 163 PKEPESCPHG-------------LAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVL 207
           P   +                  L+P  +     A+   DA+   L+     +E+D    
Sbjct: 136 PGRTKVAVMDDYFARQILGLHEPLSPLGTLFEDTAMVVLDAVVADLMRRLGKNEHDLAKR 195

Query: 208 H 208
           H
Sbjct: 196 H 196


>gi|297616826|ref|YP_003701985.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Syntrophothermus lipocalidus DSM 12680]
 gi|297144663|gb|ADI01420.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 373

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 49/138 (35%), Gaps = 3/138 (2%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +DF     G      +   +       +   V     L + + ++  KR   V VVDE 
Sbjct: 228 ADDFVASFVGKNRRGNYALLTVEQVMHLNPVTVLPSMGLAECLALMKRKRVDTVLVVDEE 287

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
             L G ++  D+ R   +      + ++   N   +L  T    A  L+    +  L VV
Sbjct: 288 GVLVGGVSIEDLDR---EHQRVYRIGEIADHNLVTVLNSTSAKDAFDLMVGGKLKYLPVV 344

Query: 321 DDCQKAIGIVHFLDLLRF 338
           D  +   G+V    ++  
Sbjct: 345 DAQRHLRGLVTRTSMVNA 362



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 42/189 (22%)

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
           A A  LLE      + +   +P    G        +       PL+ +  P   A+  +S
Sbjct: 112 ARAHELLEMAGMDPDVYANRYPNELSGGQQQRIGVLRALAADPPLILMDEPFG-ALDPIS 170

Query: 248 E-----------KRFGCVA-----------------VVDEGQKLKGIITEGDIFRNFHKD 279
                       KR                      VV +  ++  + T  D+ R    D
Sbjct: 171 REALQDELKNLQKRLRKTIIFVTHDIDEALKLADRVVVMKEGQVIQVATPEDLLRKPADD 230

Query: 280 L-------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                           L+VE VM  NP  +L    L   + L+++  +  ++VVD+    
Sbjct: 231 FVASFVGKNRRGNYALLTVEQVMHLNPVTVLPSMGLAECLALMKRKRVDTVLVVDEEGVL 290

Query: 327 IGIVHFLDL 335
           +G V   DL
Sbjct: 291 VGGVSIEDL 299


>gi|299820869|ref|ZP_07052758.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria grayi DSM 20601]
 gi|299817890|gb|EFI85125.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria grayi DSM 20601]
          Length = 266

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 12/161 (7%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLE-------SSLQGELSFQFHCAVEKIKAIKGR 66
           +G S  K    Q ALR  I EK+ L S+E        +L  +   Q   AV+ I A    
Sbjct: 74  EGFSEFKVKLKQEALR--IGEKKALDSVEVLEAFFERTLNRDYDKQLEEAVDMIHAAS-L 130

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           VV  GIG SG +    +   ++    +F++      + + G    + ++I+LS SG +D+
Sbjct: 131 VVFLGIGTSGILAEYGSRFFSNLRKRTFYIKDP--FYPNPGEQFDNAVMIILSESGETDQ 188

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +       + +   +I+IT+ N++ ++  +DI +      E
Sbjct: 189 VIEQAQNMQLYGSKIISITNNNRNTLSKLSDINIPYFVTQE 229


>gi|56752006|ref|YP_172707.1| hypothetical protein syc1997_c [Synechococcus elongatus PCC 6301]
 gi|56686965|dbj|BAD80187.1| hypothetical protein [Synechococcus elongatus PCC 6301]
          Length = 664

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           V    P+   + ++  +    V +++  Q L GI TE D+ R       + +  +E+V  
Sbjct: 20  VAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIGITITSTPIEEVAT 79

Query: 291 KNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                I E     +   + L RQ+N+  L VV+   + IGI+ +
Sbjct: 80  STVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTY 123



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 244 TILSEKRFGCVAVVDEGQ----KLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVIL 297
            ++S++   CV + ++      K  G++TE DI   +    DL+     D M   P  I 
Sbjct: 163 ELMSDRLISCVVITEKDPSGFPKPIGLVTERDILHLQVQGADLSQTIAADFMGSPPVFIQ 222

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               L  A Q +R   I  L+VVD+    +G++ 
Sbjct: 223 ASDTLWQANQYMRARKIRRLLVVDERNIMVGLLT 256



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 235 IGCPLIDAITILS---EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
               + D I  L+   +     + VV+   +L GI+T   I R       L    V +VM
Sbjct: 86  QESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGIRRLLKPIDLLRLWRVSEVM 145

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC----QKAIGIVHFLDLL 336
           +K+              +L+    IS +++ +       K IG+V   D+L
Sbjct: 146 VKSIICADRYQSALSLAELMSDRLISCVVITEKDPSGFPKPIGLVTERDIL 196



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 23/48 (47%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P  +     +   + ++ + + S +++++  Q  +GI    DL+R 
Sbjct: 15  RQPLTVAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRL 62


>gi|284053111|ref|ZP_06383321.1| multi-sensor hybrid histidine kinase [Arthrospira platensis str.
           Paraca]
          Length = 480

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 7/88 (7%)

Query: 259 EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKV--ILEDTLLTVAMQLLRQHNI 314
           +  KL G+ITE D+ R     +  + L++  VM ++     I     +  A+ L+RQH I
Sbjct: 4   KKGKLVGVITERDLVRLATQYRSFDHLTLAAVMTRDLVTLSIEPHQDIFTAITLMRQHQI 63

Query: 315 SVLMVVDDCQKAIGIV---HFLDLLRFG 339
             L V+    + +G++      + L+ G
Sbjct: 64  RHLPVLSKTGELVGLISTQTLRECLQPG 91



 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDIFR--NFHKDLNTLSVE 286
               ++    +++E R  CV + +            GI+TE DI +      + + +   
Sbjct: 112 PNASILHLAQLMAEYRVSCVVIAEPKIGDSFLCHPVGIVTERDIVKCSALDLNFDQVMAA 171

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           D+M      +     L VA + ++Q  +  L+V D  Q+ +GI+    LL+
Sbjct: 172 DIMSSPLWCLHPTENLWVAHEQMQQRGVRRLVVCDQQQQLVGILTQTSLLQ 222



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 50/113 (44%), Gaps = 8/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTL-SVEDVMI 290
           ++    +  AIT++ + +   + V+ +  +L G+I+   +       DL  L  V + M 
Sbjct: 45  IEPHQDIFTAITLMRQHQIRHLPVLSKTGELVGLISTQTLRECLQPGDLFKLRQVAEAMT 104

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC------QKAIGIVHFLDLLR 337
           ++      +  +    QL+ ++ +S +++ +           +GIV   D+++
Sbjct: 105 RDVLHATPNASILHLAQLMAEYRVSCVVIAEPKIGDSFLCHPVGIVTERDIVK 157


>gi|284162418|ref|YP_003401041.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012415|gb|ADB58368.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 287

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 21/101 (20%), Positives = 45/101 (44%), Gaps = 5/101 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
              D +  + +K     A V +  KL GI+T  D+ R   +D   L    +M +NP  + 
Sbjct: 26  STRDKVLEILKKHNVSAAPVLKSGKLVGIVTIKDLLRKIEEDQLAL----LMTENPVTVK 81

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +   +++  ++    L VV +  K +G +   ++++ 
Sbjct: 82  PNDSIKKVVEIFLKNPFRRLPVV-ERGKLVGFLTVRNIIKK 121



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+DVM KN       +     +++L++HN+S   V+    K +GIV   DLLR 
Sbjct: 9   MKVKDVMTKNVIYAELPSTRDKVLEILKKHNVSAAPVL-KSGKLVGIVTIKDLLRK 63



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 1/105 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             ++   VK    +   + I  +  F  + VV E  KL G +T  +I +   +      V
Sbjct: 73  MTENPVTVKPNDSIKKVVEIFLKNPFRRLPVV-ERGKLVGFLTVRNIIKKIAEMNIEKPV 131

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +D M      + +   L V  +++R     +  V+DD  K +G+V
Sbjct: 132 KDYMCNEVVCVWDGMPLNVCGEVMRLSGSELCPVLDDNAKLVGLV 176



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 25/157 (15%), Positives = 51/157 (32%), Gaps = 38/157 (24%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII--- 267
            K+  + +      +  + +  V  G PL     ++         V+D+  KL G++   
Sbjct: 120 KKIAEMNIEKPVKDYMCNEVVCVWDGMPLNVCGEVMRLSGSELCPVLDDNAKLVGLVDEK 179

Query: 268 ---TEGDIFRNFHK-------------------------------DLNTLSVEDVMIKNP 293
              TE  I     K                                L    V++ M K P
Sbjct: 180 IMLTESLIEEFIEKTQYSSSSDVDDEWSWEGTRDYVTKFFEVSVLKLPKDPVKNFM-KKP 238

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +   T ++   + + ++++  + V+D   +  GIV
Sbjct: 239 AYVYPQTTVSKCAKEMIRNDVDHIPVLDHMDRICGIV 275


>gi|294635844|ref|ZP_06714299.1| transcriptional regulator HexR [Edwardsiella tarda ATCC 23685]
 gi|291090816|gb|EFE23377.1| transcriptional regulator HexR [Edwardsiella tarda ATCC 23685]
          Length = 289

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ LE +         + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMAGLEMAKNHLDMATINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVVYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  + + AR     +IAITS   + +A  A
Sbjct: 161 DDIVMQRMSCMNSNEGDVVVLISHTGRTKSLVEMAHLARENDATVIAITS-LGTPLAQEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           ++ L L    ++  +   P  S + QL + DALA      R     D
Sbjct: 220 NLALLLDVPEDTDVY--MPMVSRLAQLTLVDALATGFTLRRGAKFRD 264


>gi|317050949|ref|YP_004112065.1| Cl- channel voltage-gated family protein [Desulfurispirillum
           indicum S5]
 gi|316946033|gb|ADU65509.1| Cl- channel voltage-gated family protein [Desulfurispirillum
           indicum S5]
          Length = 608

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/131 (21%), Positives = 53/131 (40%), Gaps = 2/131 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GGK  T+    S       +   +    P      ++++       V++   +L GII+ 
Sbjct: 465 GGKDVTIMQRLSVRDVETRNCDAIPESLPFRQIQMLIAKSAQMDFPVLNHQGQLVGIISF 524

Query: 270 GDIFR-NFHKDLNTLSVE-DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            DI +  F + L+ L V  D+   +   +  +  L  A++     +   L VVDD  K  
Sbjct: 525 QDIRKVIFEEGLDDLIVARDIASTDLITVHVNDNLQDALEKFTIRDFDHLPVVDDEGKLH 584

Query: 328 GIVHFLDLLRF 338
           G++    +L+ 
Sbjct: 585 GMISRQKILQA 595



 Score = 35.6 bits (81), Expect = 9.6,   Method: Composition-based stats.
 Identities = 30/201 (14%), Positives = 72/201 (35%), Gaps = 34/201 (16%)

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA-CHADIVLTL 162
           GD  ++       ++S S        ++   ++ SI ++ +T +           I+  L
Sbjct: 424 GDFNIVLPTMFACMISVS--------LMKILKQDSIDMVPLTRKGYRFSGGKDVTIMQRL 475

Query: 163 PKEPESCPH-GLAPTTSAIMQLAIGDALAIALLESRNFSENDF-YVLHPGGKLGTLFVC- 219
                   +    P +    Q+ +  A +  +         DF  + H G  +G +    
Sbjct: 476 SVRDVETRNCDAIPESLPFRQIQMLIAKSAQM---------DFPVLNHQGQLVGIISFQD 526

Query: 220 -------------ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
                              +   +  V +   L DA+   + + F  + VVD+  KL G+
Sbjct: 527 IRKVIFEEGLDDLIVARDIASTDLITVHVNDNLQDALEKFTIRDFDHLPVVDDEGKLHGM 586

Query: 267 ITEGDIFRNFHKDLNTLSVED 287
           I+   I + ++ ++  +++++
Sbjct: 587 ISRQKILQAYNNEVQRIALQE 607


>gi|221070131|ref|ZP_03546236.1| transcriptional regulator, RpiR family [Comamonas testosteroni
           KF-1]
 gi|220715154|gb|EED70522.1| transcriptional regulator, RpiR family [Comamonas testosteroni
           KF-1]
          Length = 282

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 67/181 (37%), Gaps = 3/181 (1%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +++   AL+ + +    L+   + +      +    +    + +  +   G G SG +  
Sbjct: 87  DTSFNVALKVVDSSIATLALFRTYVPKISIERASNTLAAAYSEQRSLSFYGSGHSGVVAQ 146

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                 +  G  S  ++   +   +       D+++ LS SG + EL   +  A+R    
Sbjct: 147 DAQLRFSRLGFNSTALNDGYSQVLNAASRKEGDVVVALSCSGRTKELLESVDVAKRQGAT 206

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T      +A    I L      +   +   P +S ++ L + D +A A+       
Sbjct: 207 VIAVTGSGT-PLATMGSIHLATDHLEDIDRY--LPMSSRLLHLVVIDIVATAVALQIGCG 263

Query: 201 E 201
            
Sbjct: 264 R 264


>gi|295092506|emb|CBK78613.1| Transcriptional regulators [Clostridium cf. saccharolyticum K10]
          Length = 302

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 30/177 (16%), Positives = 62/177 (35%), Gaps = 6/177 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
                +   +  LS   + +      +F   ++ +   K R+ I G G SG  G ++   
Sbjct: 88  TTRHVLETYQELLSKTYALVDESQVGRF---LDLLLEKK-RIYIYGKGSSGLAGEEMQFR 143

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G     +  +        +++ + L+I +S SG ++E+   L  A+     ++ +T
Sbjct: 144 FMRIGVNVQAITDSHLMKMHSVLVSEECLVIGISVSGQTEEVIHSLKAAKAQGARVVLMT 203

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           S          D VL      +         +     L + D L    ++S  F + 
Sbjct: 204 SRRDRSFDAFCDEVLLFAV--KGHMENGRAISPQFPILIMVDILYSHYMQSDRFRKE 258


>gi|254284121|ref|ZP_04959089.1| bifunctional protein glk [gamma proteobacterium NOR51-B]
 gi|219680324|gb|EED36673.1| bifunctional protein glk [gamma proteobacterium NOR51-B]
          Length = 337

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 31/163 (19%), Positives = 66/163 (40%), Gaps = 4/163 (2%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             +S+L ++ +   +     AV+ +   + R+   G+G S  +             P   
Sbjct: 151 NAISALVAAKEQLPTGDIARAVDFLAQAR-RIHFFGLGTSAAVTKDAEHKFFRFNVPVTN 209

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                         +  D+  ++S +G +  L  +   AR+    ++++T+  +S +A  
Sbjct: 210 HQDPLMQRMLAAAGSVGDVFFIISHTGRTRALVEVAELARQTEATVVSLTA-PQSPLAQE 268

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +D  +TL     +  +   P TS ++QLA+ D LA  +   R 
Sbjct: 269 SDCAITLTIGENTEEY--LPMTSRLVQLAVIDVLATGVTLRRG 309


>gi|15922213|ref|NP_377882.1| hypothetical protein ST1897 [Sulfolobus tokodaii str. 7]
 gi|15623002|dbj|BAB66991.1| 239aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 239

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 5/127 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +     ++M     I  +     + +A  I++ +  G + VV +G ++ GI+TE D
Sbjct: 51  NWRKIDGTVEEIM--NKDIVFITPTSDIKEACRIMTSEGIGSL-VVGDGVRIVGIVTERD 107

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R+  K    + V DVM  +P V  ++T L+     ++ +     ++VD+ ++ IG++ 
Sbjct: 108 LIRH-CKVKGDVKVGDVMNVDPLVATKETKLSDIADFMKSYWQRHAVIVDE-KRPIGVIS 165

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 166 AKDIGRA 172



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 8/105 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V  G  +  A+ I+       + V  +     GIIT  DI  N+ K     +VE++M K+
Sbjct: 14  VTKGTSIFKALEIMINNNIRRLLVEKD-----GIITIRDIIYNWRK--IDGTVEEIMNKD 66

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              I   + +  A +++    I  L VV D  + +GIV   DL+R
Sbjct: 67  IVFITPTSDIKEACRIMTSEGIGSL-VVGDGVRIVGIVTERDLIR 110



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 38/98 (38%), Gaps = 3/98 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
                 +      L D    +         +VDE  +  G+I+  DI R     +DL ++
Sbjct: 124 MNVDPLVATKETKLSDIADFMKSYWQRHAVIVDEK-RPIGVISAKDIGRALLAKRDLTSV 182

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
             E  M  N   +  D+ L  A  L+ + NI  L VVD
Sbjct: 183 KAEGYMTLNVYKVTPDSSLETARLLMAEKNIGFLPVVD 220



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 28/52 (53%), Gaps = 5/52 (9%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + D+M K+   + + T +  A++++  +NI  L+V  D     GI+   D++
Sbjct: 3   IRDIMTKDVIYVTKGTSIFKALEIMINNNIRRLLVEKD-----GIITIRDII 49


>gi|313623599|gb|EFR93769.1| conserved protein YtoI [Listeria innocua FSL J1-023]
          Length = 437

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 73/198 (36%), Gaps = 17/198 (8%)

Query: 144 ITSENKSV----VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           I     S     +   A +++T   + +     LA      +     D   +A + +R  
Sbjct: 120 IVGNRVSAHELALKRGAAVLITGGFDTDDEVKQLADEKELPILSTSYDTFTVATMINRAI 179

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +           +    V   D++   ++   +     + D   +          VV+ 
Sbjct: 180 YD---------QLIKKEVVFVEDILTPLETTAYLSTSDKVEDWHKMEEATGHSRFPVVNR 230

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
             +L G++T  DI     K+  ++S+E VM KNP  +     +     ++   +I V+ V
Sbjct: 231 AMRLSGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMMIWESIEVIPV 286

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V D    IGIV   D+L+
Sbjct: 287 VKDDLTLIGIVSRQDILK 304


>gi|313126873|ref|YP_004037143.1| transcriptional regulator, contains c-terminal cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293238|gb|ADQ67698.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
          Length = 262

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +   A+   +    +  V     + D    + E        V EG+K++G +T  D+   
Sbjct: 1   MNGKAAVKEYMTREVQTVSPADSVADVAKRIVESDGHNGFPVCEGRKVEGFVTARDLL-- 58

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D     +  VM ++  V   D  +  A +++ +  I  L VVDD    +GI+   D+
Sbjct: 59  LEND--EAPIFTVMTEDIIVAHPDMAVNDAARVILRSGIQKLPVVDDAGNLVGIISNTDV 116

Query: 336 LR 337
           +R
Sbjct: 117 IR 118



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 15/83 (18%), Positives = 30/83 (36%), Gaps = 4/83 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + I +      + DA  ++       + VVD+   L GII+  D+ R+  +      V
Sbjct: 70  MTEDIIVAHPDMAVNDAARVILRSGIQKLPVVDDAGNLVGIISNTDVIRSQIERATPEKV 129

Query: 286 EDVMIK----NPKVILEDTLLTV 304
             +M      +   I ++     
Sbjct: 130 GKLMRTLEQIHGITIHQEHDSVE 152


>gi|92117198|ref|YP_576927.1| signal-transduction protein [Nitrobacter hamburgensis X14]
 gi|91800092|gb|ABE62467.1| putative signal-transduction protein with CBS domains [Nitrobacter
           hamburgensis X14]
          Length = 142

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +  V+    L  A+ +LSE+R G V V+  G ++ GI++E D+ R   +    
Sbjct: 7   LTAKGHQVVSVEPDVKLAAAVKLLSERRIGSVLVM-SGTRIDGILSERDVVRALDERGAA 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                V   M +          +T  M+++       L VV+D  + +G+V   D+++  
Sbjct: 66  ALDEPVSAAMTRKVVSCRLSDTVTHLMEIMTSERFRHLPVVEDD-RLVGLVSIGDVVKLR 124

Query: 340 I 340
           +
Sbjct: 125 V 125


>gi|32491354|ref|NP_871608.1| hypothetical protein WGLp605 [Wigglesworthia glossinidia
           endosymbiont of Glossina brevipalpis]
 gi|25166561|dbj|BAC24751.1| guaB [Wigglesworthia glossinidia endosymbiont of Glossina
           brevipalpis]
          Length = 487

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 59/180 (32%), Gaps = 10/180 (5%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTL 216
            + +  +         P  SA M      ++AIAL +     F   +  + +   ++  +
Sbjct: 27  NVDVSTKLTKKIKLKIPILSAAMDTVTESSMAIALAQEGGMGFIHKNMSIKNQIKEIKKV 86

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + ++ +      V     +     I     FG   VV E  KL GI+T  D     
Sbjct: 87  KRYENGMIMNPKC---VTPNTSISTIKNITIINGFGSYPVVTENGKLIGIVTRRD---AL 140

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  SV  VM        + +     + +  +    +   +VVD     IG++   D
Sbjct: 141 CAKDINQSVCTVMTPKDKLVTVYQGEKQEIVLSKMYDKRVEKALVVDRFFNLIGMITVKD 200


>gi|332298455|ref|YP_004440377.1| IMP dehydrogenase [Treponema brennaborense DSM 12168]
 gi|332181558|gb|AEE17246.1| IMP dehydrogenase [Treponema brennaborense DSM 12168]
          Length = 501

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 71/192 (36%), Gaps = 17/192 (8%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P        ES      P  SA+MQ    D +AIAL +     F      + 
Sbjct: 28  PANVNLKTPVVKFRRGEESPLSMNIPMVSAVMQSVSNDTMAIALAKEGGISFIYGSQTIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
                +  +    +  + S  +   +K    L D + + +      VAV  +     KL 
Sbjct: 88  RQADMIRRVKSYKAGFVTSDSN---IKPDQSLQDVVDLKARTGHSTVAVTADGSPNGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIIT  D     +K      V D M +  +  V  +   L+ A +L+  H ++ L ++  
Sbjct: 145 GIITSRDFR--INKVDPAAKVRDYMTRFDDLIVGQDGITLSEANELIWAHKLNSLPIIGK 202

Query: 323 CQKAIGIVHFLD 334
               + +V   D
Sbjct: 203 SGNLVSMVFRKD 214


>gi|304311841|ref|YP_003811439.1| Inosine-5\'-monophophate dehydrogenase [gamma proteobacterium HdN1]
 gi|301797574|emb|CBL45794.1| Inosine-5\'-monophophate dehydrogenase [gamma proteobacterium HdN1]
          Length = 489

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  V     ++  +    S V+      
Sbjct: 41  NIPLVSAAMDTVTESRLAIAMAQEGGIGILHKNLTVDEQARQVRQVKKHESGVVR---DP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + + + +      V VV +G +L GI+T  D+     +      V  +M 
Sbjct: 98  ITIGPDASVRELVELTATHHISGVPVV-QGDQLIGIVTARDLRF---ETRFDSPVSSIMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                    E        QLL +H I  +++VDD  +  G+V   D+ + 
Sbjct: 154 PKEKLVTAREGAKPNEIRQLLHKHRIEKVLLVDDQFRLRGMVTNTDIRKA 203


>gi|119946016|ref|YP_943696.1| DNA-binding transcriptional regulator HexR [Psychromonas ingrahamii
           37]
 gi|119864620|gb|ABM04097.1| DNA-binding helix-turn-helix domain-containing transcriptional
           regulator protein RpiR [Psychromonas ingrahamii 37]
          Length = 286

 Score = 71.1 bits (173), Expect = 2e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 64/161 (39%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L+S+     +     AVE +     ++   G+G S  +     +       P     
Sbjct: 103 IACLDSAKNMIDTAVIKRAVEVLTRAD-KIAFFGLGASSAVAHDALNKFIRFNIPVSCFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                        + D+I+++S +G +  L  +   AR  +  +IA+T    S +A  ++
Sbjct: 162 DIVMQKMSCINSRKGDVIVLISHTGRTKALVEVAQLARENNAFVIALTPN-HSPLAEKSN 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +VL+     ++  +   P  S I+Q+ I D LA      R 
Sbjct: 221 LVLSASVPEDTDIY--MPMASRIVQMVIIDVLATGFTLRRG 259


>gi|322371926|ref|ZP_08046468.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
 gi|320548348|gb|EFW90020.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
          Length = 131

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
              ++  V     + +A   +     G V V+D+   L+GI+T  D  +   +    +  
Sbjct: 1   MSTTLQTVTPETLVEEAAQKMLSNDVGSVIVIDDENHLEGILTTTDFVKIVAERQPKDET 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V   M  +         +      + +     + VVD+ +  IG++   DL 
Sbjct: 61  PVSAYMTADVSTASIQDSIREVSDRMVEGGFHHMPVVDETEGVIGMISTTDLT 113



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M    + +  +TL+  A Q +  +++  ++V+DD     GI+   D ++ 
Sbjct: 1   MSTTLQTVTPETLVEEAAQKMLSNDVGSVIVIDDENHLEGILTTTDFVKI 50


>gi|257439868|ref|ZP_05615623.1| putative transcriptional regulator HexR [Faecalibacterium
           prausnitzii A2-165]
 gi|257197681|gb|EEU95965.1| putative transcriptional regulator HexR [Faecalibacterium
           prausnitzii A2-165]
          Length = 283

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 57/138 (41%), Gaps = 1/138 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+++  +           AV+ ++A + +V   G G S  + + + +  +S         
Sbjct: 107 LTAINGTQNSLSPEAVEQAVDLMRAAR-QVFCLGQGGSMLLANDICARFSSLSNKFRTAG 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        ++  +D+++ +S+SG++ ++   L  A+     +I +T    S  A  AD
Sbjct: 166 DSHLQILAASLMGPEDVVLFISYSGATRDMLETLRTAKASGAKIILLTHYEDSPGAAMAD 225

Query: 158 IVLTLPKEPESCPHGLAP 175
           +VL    +      G  P
Sbjct: 226 VVLRCGAQESPLDSGSIP 243


>gi|115449677|ref|NP_001048525.1| Os02g0818000 [Oryza sativa Japonica Group]
 gi|113538056|dbj|BAF10439.1| Os02g0818000 [Oryza sativa Japonica Group]
          Length = 187

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V+D   +  G+I + D  R  H   +   + +VM      +  D  +  A  L+ + 
Sbjct: 97  GLPVIDASLRCVGVIVKSDRARASHG--SKTKIAEVMTSPAITLPSDKTVMDAAALMLKK 154

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  L +V+  ++ IGIV   D+LR 
Sbjct: 155 KIHRLPIVNQDRQVIGIVTRADVLRE 180



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                ++DA  ++ +K+   + +V++ +++ GI+T  D+ R    
Sbjct: 139 PSDKTVMDAAALMLKKKIHRLPIVNQDRQVIGIVTRADVLRELEA 183


>gi|301061599|ref|ZP_07202357.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300444292|gb|EFK08299.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 139

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +   +L +K      V  EG+K+ GII+  D  +          V+  M   
Sbjct: 29  VSPHTTMEEVALLLRKKGCTGFPVT-EGRKVVGIISRRDFRKVRKDSQMKAPVKAYMSTK 87

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + I  D+ +  A++L+ + +I  L VV++    IGI+   D +R+
Sbjct: 88  VRQIDLDSGVISAVRLMVREDIGRLPVVNEGN-LIGIITRSDTMRY 132


>gi|229592428|ref|YP_002874547.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           SBW25]
 gi|229364294|emb|CAY52029.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           SBW25]
          Length = 489

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 60/174 (34%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKRYEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSE-KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               ++    + D +  L+       V V+     L GI+T  D+     ++   ++V +
Sbjct: 96  DPITIEADATVRD-LFELTRLHNISGVPVL-HDGDLVGIVTSRDVRF---ENRLEVTVRE 150

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           VM        + E        +LL +H I  +++VDD     G++   D+ +  
Sbjct: 151 VMTPKERLVTVKEGADKNDVRELLHKHRIERVLIVDDKFALKGMMTVNDIEKAK 204


>gi|170701835|ref|ZP_02892766.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
 gi|170133252|gb|EDT01649.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
          Length = 143

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVHIAPTDSIRHAAQLMERYDIGALPVCD-NNRLVGMVTDRDLTVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +V    P     ED  L      +    +  L VVD  Q+ +G++   D+
Sbjct: 67  RIHEVAS-GPIEWCFEDDPLDEIQHYMADAQLRRLPVVDHDQRLVGMLSLADI 118



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M ++   I     +  A QL+ +++I  L V D+  + +G+V   DL 
Sbjct: 4   VNEIMSQDVVHIAPTDSIRHAAQLMERYDIGALPVCDN-NRLVGMVTDRDLT 54


>gi|157374858|ref|YP_001473458.1| CBS domain-containing protein [Shewanella sediminis HAW-EB3]
 gi|157317232|gb|ABV36330.1| CBS domain containing membrane protein [Shewanella sediminis
           HAW-EB3]
          Length = 143

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHK---DLNTLSVEDVMI 290
              P+  A+ +  +       VVDE + + G I+E D + +       + N  +V DVM 
Sbjct: 19  ANMPIAQAVELFLQAGQIGGPVVDENKHVIGFISEQDCLIKMLEATYLNENHYTVGDVMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P     +  +    Q++      +  V+D+  + IGI+   D+LR 
Sbjct: 79  SEPLTARPEGSVFDLAQIMTSAKPKIFPVIDENDQLIGIITRSDVLRA 126



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQL-LRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++ + D M K P +   +  +  A++L L+   I    VVD+ +  IG +   D L
Sbjct: 1   MESIKIADYMSKRPVIFTANMPIAQAVELFLQAGQIGG-PVVDENKHVIGFISEQDCL 57



 Score = 43.3 bits (101), Expect = 0.046,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               DVMHS       +    + D   I++  +     V+DE  +L GIIT  D+ R   
Sbjct: 71  YTVGDVMHSEPLTA--RPEGSVFDLAQIMTSAKPKIFPVIDENDQLIGIITRSDVLRAID 128

Query: 278 KDLNTL 283
             L  +
Sbjct: 129 DQLRAM 134


>gi|124028011|ref|YP_001013331.1| hypothetical protein Hbut_1149 [Hyperthermus butylicus DSM 5456]
 gi|123978705|gb|ABM80986.1| conserved archaeal protein [Hyperthermus butylicus DSM 5456]
          Length = 270

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/124 (27%), Positives = 51/124 (41%), Gaps = 10/124 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+     D+M +      V+    L+ A+ I+       V VV    +L GI+T+ DI 
Sbjct: 1   MTVTAKVRDIMLTDYPA--VEKNETLVQAVRIMERYDSDRV-VVFSEGRLAGIMTKKDIM 57

Query: 274 ------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
                 R        L V   M  +PK I  D     A Q++   NI  L VV+D +  +
Sbjct: 58  VKLATLRTRSVTPGRLHVSSFMTPDPKTIGPDASAVEAAQVMVGDNIGSLPVVEDDET-V 116

Query: 328 GIVH 331
           G+V 
Sbjct: 117 GLVT 120



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 55/146 (37%), Gaps = 25/146 (17%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC-----------VAVVDEGQKLK 264
                + ++ S   + +V +   + + +  ++ K               V V+DE  +L 
Sbjct: 120 TRWEIAKIVASLPDVKVVDVMITVPEVLR-ITNKVLHARQVLLRYNLLFVPVLDEEGRLV 178

Query: 265 GIITEGDIFRNF------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           G +T  ++   F             + +  L V+D+M   P V+  D  +  A + + + 
Sbjct: 179 GYVTVDEVADAFLAFHDIVPEKYRKERIEHLLVDDIMRLRPPVVSPDASVVEAFERMSEK 238

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
                 VV    + +GIV   +L++ 
Sbjct: 239 RSKGAAVV-HEGRLVGIVTLNELVKL 263



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 4/77 (5%)

Query: 204 FYVLH---PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
           F   H   P                     P+V     +++A   +SEKR    AVV E 
Sbjct: 190 FLAFHDIVPEKYRKERIEHLLVDDIMRLRPPVVSPDASVVEAFERMSEKRSKGAAVVHE- 248

Query: 261 QKLKGIITEGDIFRNFH 277
            +L GI+T  ++ +   
Sbjct: 249 GRLVGIVTLNELVKLVA 265


>gi|110740370|dbj|BAF02080.1| hypothetical protein [Arabidopsis thaliana]
          Length = 295

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 4/100 (4%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDL--NTLSVEDVMIKNPKVILEDT 300
             + E +     V+ E  KL GI+T  D + R   ++L   T +VE VM  NP+    D 
Sbjct: 1   MKMVEYQSSAAMVMVEN-KLVGILTSKDILMRVISQNLPQETTTVEKVMTPNPESATVDM 59

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  A+ ++       L V+D     + ++  + +    +
Sbjct: 60  AIVEALHIMHNGKFLHLPVLDKDGDVVAVIDVIHITHAAV 99


>gi|148508122|gb|ABQ75916.1| CBS domain protein [uncultured haloarchaeon]
          Length = 382

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 12/148 (8%)

Query: 200 SENDFYVLHPGGKLGT--LFVCASDVMHSGDSIPLVKIGCP-------LIDAITILSEKR 250
             N   V   GG  G           M     + +V    P       + +A  +L E  
Sbjct: 31  RPNGIIVTKEGGYNGVVGEKQLVRSRMGDDTKVDVVTKSAPKLDRHEDIREAARMLVEGD 90

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                V  EG +L GI+T  DI     ++L+ +SVED+   +   + E + L  A+  LR
Sbjct: 91  VNVAPVF-EGNQLYGIVTGEDILEAVLENLDAISVEDIFTDDVVDVAEQSPLGEAINKLR 149

Query: 311 QHNISVLMVV--DDCQKAIGIVHFLDLL 336
           +H+IS + VV  D+     GI+   D++
Sbjct: 150 EHSISRVPVVEQDESSSLTGILTTHDII 177



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKD----------- 279
           V    PL +AI  L E     V VV  DE   L GI+T  DI     +D           
Sbjct: 135 VAEQSPLGEAINKLREHSISRVPVVEQDESSSLTGILTTHDIIDFVVRDDDRQGRGDRSG 194

Query: 280 ----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFL 333
               +  L V D+M         +  ++ A++ +  ++IS ++V          G++   
Sbjct: 195 DLDRMLDLPVYDLMSAPVITAQPNEPVSDAVKRMFDNDISGVVVTPAAGDTTIEGVLTKT 254

Query: 334 DLLRF 338
           D+LR 
Sbjct: 255 DVLRA 259



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 37/84 (44%), Gaps = 4/84 (4%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +V +     G++ E  + R+   D   +   DV+ K+   +     +  A ++L + ++
Sbjct: 35  IIVTKEGGYNGVVGEKQLVRSRMGDDTKV---DVVTKSAPKLDRHEDIREAARMLVEGDV 91

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           +V  V  +  +  GIV   D+L  
Sbjct: 92  NVAPVF-EGNQLYGIVTGEDILEA 114


>gi|126643328|ref|YP_001086312.1| IMP dehydrogenase [Acinetobacter baumannii ATCC 17978]
          Length = 440

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/164 (19%), Positives = 56/164 (34%), Gaps = 15/164 (9%)

Query: 181 MQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIPLVKIG 236
           M       +AIA+ ++         +LH    +         V             V   
Sbjct: 1   MDTVTESRMAIAMAQNGGIG-----ILHKNMDIAAQAAEVRRVKKFEAGMVKDPITVSPE 55

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI--KNPK 294
             + + I I S      V VV +  K+ GI+T  D    F  +L    V ++M       
Sbjct: 56  TTVRELIAITSANNISGVPVV-KDGKVVGIVTGRDTR--FETNL-EQPVSNIMTGQDRLV 111

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + E         LL++H I  ++VV +  +  G++   D  + 
Sbjct: 112 TVREGESKENIQALLQKHRIEKVLVVGESNELKGLITVTDFRKA 155


>gi|54309454|ref|YP_130474.1| rpiR family transcriptional regulatory protein [Photobacterium
           profundum SS9]
 gi|46913890|emb|CAG20672.1| putative rpiR-family transcriptional regulatory protein
           [Photobacterium profundum SS9]
          Length = 290

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L            ++IK+ K  V   G+G SG       +     G     +    
Sbjct: 120 LAETLNLLNFDTLEKVAKQIKSAKA-VYFFGVGSSGITAEDAKNKFMRIGFNVDALTNNH 178

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++ + DL + +S SGSS E    L  A+      +AIT   +S +   +D VL
Sbjct: 179 FMYMKASLLQKGDLAVGISHSGSSKETTKALQLAKEAGADTVAITHNPRSAITEFSDFVL 238

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            + I QL + D +   L+  
Sbjct: 239 VNGNRQGKLQGDSI--GTKISQLFVLDLVYALLVNE 272


>gi|297193640|ref|ZP_06911038.1| RpiR-family transcriptional regulator [Streptomyces
           pristinaespiralis ATCC 25486]
 gi|197721809|gb|EDY65717.1| RpiR-family transcriptional regulator [Streptomyces
           pristinaespiralis ATCC 25486]
          Length = 316

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 162 RIDIYGVGASSLVGMDLAQKLLRIGLIAHAHADPHLAVTNAVQLRSGDVAIAITHSGSTG 221

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V+ +AD VLT     ES     A  +S   QL +
Sbjct: 222 DVIEPLRVAFDRGATTIAITGRPDGPVSQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 280

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 281 VDCLFIGVAQR 291


>gi|160871948|ref|ZP_02062080.1| inosine-5'-monophosphate dehydrogenase [Rickettsiella grylli]
 gi|159120747|gb|EDP46085.1| inosine-5'-monophosphate dehydrogenase [Rickettsiella grylli]
          Length = 486

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 15/177 (8%)

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHS 226
            S  +   P  SA M       LAIAL +          ++H    +         V + 
Sbjct: 34  TSKINLKIPLISAAMDTVTEAKLAIALAQEGGLG-----IIHKNMSIEAQTQQIRKVKNF 88

Query: 227 GD----SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
            +    +   +     L + + ++       + V+ +   L GI+T  DI   + ++L+ 
Sbjct: 89  ENGIVRNPITIAPETTLRELLQLMVTYSISGIPVI-QNNCLVGIVTHRDIR--YEENLDK 145

Query: 283 LSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            S  +VM          E T     + LL  H +  +++VD+     G++   DL +
Sbjct: 146 -SASEVMTPQEKLVTAKEHTSPKEIIALLNHHRLEKILIVDEKFHCRGLITAKDLQK 201


>gi|154497154|ref|ZP_02035850.1| hypothetical protein BACCAP_01447 [Bacteroides capillosus ATCC
           29799]
 gi|150273553|gb|EDN00681.1| hypothetical protein BACCAP_01447 [Bacteroides capillosus ATCC
           29799]
          Length = 298

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/177 (23%), Positives = 68/177 (38%), Gaps = 5/177 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           ++ +++  +  I    + + SLE +     +      VE ++  +  ++  G+G S    
Sbjct: 91  RSDSIEDIIEKIT--YKNIMSLEDTKNLLDADTLRRCVELLRKCRTVLLF-GMGASLCAA 147

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                       P        +        TRDDL IV+S+SG + E+   +   R    
Sbjct: 148 RDAYLKFLRLNKPCMVNDDWHSQFLQARNATRDDLGIVISYSGETVEMVECMKAMRENHT 207

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           P+IAIT    S VA  AD  L       +   G    +S I QL + D L  A   S
Sbjct: 208 PIIAITRCVSSPVADLADYKLYTTANESTFRSGA--MSSRISQLNLIDILYTAFANS 262


>gi|81300905|ref|YP_401113.1| diguanylate cyclase with GAF sensor [Synechococcus elongatus PCC
           7942]
 gi|81169786|gb|ABB58126.1| diguanylate cyclase with GAF sensor [Synechococcus elongatus PCC
           7942]
          Length = 664

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/104 (24%), Positives = 46/104 (44%), Gaps = 4/104 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           V    P+   + ++  +    V +++  Q L GI TE D+ R       + +  +E+V  
Sbjct: 20  VAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRLTAIGITITSTPIEEVAT 79

Query: 291 KNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                I E     +   + L RQ+N+  L VV+   + IGI+ +
Sbjct: 80  STVTTIQESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTY 123



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 6/94 (6%)

Query: 244 TILSEKRFGCVAVVDEGQ----KLKGIITEGDIF--RNFHKDLNTLSVEDVMIKNPKVIL 297
            ++S++   CV + ++      K  G++TE DI   +    DL+     D M   P  I 
Sbjct: 163 KLMSDRLISCVVITEKDPSGFPKPIGLVTERDILHLQVQGADLSQTIAADFMGSPPVFIQ 222

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               L  A Q +R   I  L+VVD+    +G++ 
Sbjct: 223 ASDTLWQANQYMRARKIRRLLVVDERNIMVGLLT 256



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 9/111 (8%)

Query: 235 IGCPLIDAITILS---EKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
               + D I  L+   +     + VV+   +L GI+T   I R       L    V +VM
Sbjct: 86  QESDIYDVIRTLNLFRQYNVRHLPVVNATHQLIGIMTYEGIRRLLKPIDLLRLRRVSEVM 145

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC----QKAIGIVHFLDLL 336
           +K+              +L+    IS +++ +       K IG+V   D+L
Sbjct: 146 VKSIICADRYQSALSLAKLMSDRLISCVVITEKDPSGFPKPIGLVTERDIL 196



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 8/48 (16%), Positives = 23/48 (47%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + P  +     +   + ++ + + S +++++  Q  +GI    DL+R 
Sbjct: 15  RQPLTVAPTLPVAQVLAVMERQHSSYVLLMESNQTLVGIFTERDLVRL 62


>gi|322386373|ref|ZP_08060003.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus cristatus ATCC 51100]
 gi|321269597|gb|EFX52527.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus cristatus ATCC 51100]
          Length = 281

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/199 (17%), Positives = 71/199 (35%), Gaps = 11/199 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +++  H+ +KN     + + +    +     E  +  +   +    +EK      RV  
Sbjct: 79  KISKTEHTNLKN---DSSRQVLRNYIQIRQQTEDLIDEKRLERVAQLIEK----ADRVYF 131

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G SG +   +       G     +  A+       ++ ++ L+I  S SG +  +  
Sbjct: 132 FGTGSSGLVARDMKLRFMRLGVICEALTDADGFAWTTSILDKNCLVIGFSLSGQTPSIID 191

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            L  A+      + IT +   +    ++I   +P   +S P  +   ++    L + D L
Sbjct: 192 SLIDAKGMGAKTVLITGQPDLIKEDFSEI---IPVAMQSKPQFIQRISAQFPMLLMIDIL 248

Query: 190 -AIALLESRNFSENDFYVL 207
            A  L   R   E  F   
Sbjct: 249 YAFFLEIDRERKEKIFNSY 267


>gi|256961104|ref|ZP_05565275.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|293384050|ref|ZP_06629944.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|293386864|ref|ZP_06631434.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|312907999|ref|ZP_07766982.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|312978473|ref|ZP_07790211.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
 gi|256951600|gb|EEU68232.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|291078530|gb|EFE15894.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis R712]
 gi|291083698|gb|EFE20661.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis S613]
 gi|310626090|gb|EFQ09373.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           512]
 gi|311288622|gb|EFQ67178.1| putative 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO
           516]
          Length = 184

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + +     Q    +E+IK  K  + ++G G+SG      A+ L   G     V 
Sbjct: 9   LNELTQNAEKIEMEQILIFLEEIKKAK-HIFLSGAGRSGIAIQAFANRLMHLGFKVSLVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG ++ LK++   A    + +  IT +  S +   A 
Sbjct: 68  EISSPHS-----QPGDLLIICSGSGETESLKSLAKKAVESDVKIGLITMKGDSTIGKLAS 122

Query: 158 IVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            ++ LP   ++           P  SA  QLA    D++ + L++    +    +  H
Sbjct: 123 SIIVLPGTTKNENEHHSKEFKQPMGSAFEQLAFLTFDSIILNLMDEMEETSEKMFNRH 180


>gi|297618874|ref|YP_003706979.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297377851|gb|ADI36006.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 218

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 54/122 (44%), Gaps = 5/122 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
            S        +  VK+   L +    L E   GC+  +++ +K  GIITE D+  N   +
Sbjct: 5   VSVTEAMSAPVKTVKLDTTLYEVANTLKEHGIGCLIALNDLEKPVGIITEKDLVLNVVAR 64

Query: 279 DLNTL--SVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +L +   +V D++  K    I   + +  A + + +  +  L V+D   K  GI+   D+
Sbjct: 65  NLKSKEITVRDIISSKKLISISPRSTVMDAAKKMDELTVKRLPVIDGD-KLFGIITVSDI 123

Query: 336 LR 337
            +
Sbjct: 124 TK 125



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +SV + M    K +  DT L      L++H I  L+ ++D +K +GI+   DL+
Sbjct: 4   EVSVTEAMSAPVKTVKLDTTLYEVANTLKEHGIGCLIALNDLEKPVGIITEKDLV 58


>gi|146304244|ref|YP_001191560.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145702494|gb|ABP95636.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 238

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 7/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  V     + +A+T++ E+    + V D      GI+T  D+   +  D     V
Sbjct: 7   MTRNLVRVDPRSSVKEALTLMLERNIRRLIVGDAQ----GIVTMRDLV--YGWDNGNKQV 60

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           E+VM ++  +I  +     A +++ +  +  L+V  D +  +GIV   DLLR  I+
Sbjct: 61  EEVMNRDLLMISPEADAKQASKIMTKKGVGSLLVARDEE-VVGIVTERDLLRVLIV 115



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           ++        A  I+++K  G + V  + + + GI+TE D+ R        ++V DVM  
Sbjct: 70  MISPEADAKQASKIMTKKGVGSLLVARDEE-VVGIVTERDLLRVLIVS-EGVNVGDVMKV 127

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +P +   +T +   ++ ++ +     +VV +     GIV   D+ R 
Sbjct: 128 DPLISAPETTVLEIIKAMKDNWERHAIVV-EDNLPSGIVSIRDVGRA 173



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + DVM +N   +   + +  A+ L+ + NI  L+V D      GIV   DL+
Sbjct: 1   MKISDVMTRNLVRVDPRSSVKEALTLMLERNIRRLIVGDAQ----GIVTMRDLV 50



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 22/102 (21%), Positives = 43/102 (42%), Gaps = 2/102 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               +++ I  + +       VV E     GI++  D+ R   +      V  +M +   
Sbjct: 134 PETTVLEIIKAMKDNWERHAIVV-EDNLPSGIVSIRDVGRAILEGKVNSPVSGIMKRPVF 192

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               D+ L +A +++ Q N+  L VVD  +  +G V   ++L
Sbjct: 193 RTTPDSSLEIARKIMVQENVGFLPVVD-SRTLLGSVEEREIL 233


>gi|121594886|ref|YP_986782.1| inosine-5'-monophosphate dehydrogenase [Acidovorax sp. JS42]
 gi|222110463|ref|YP_002552727.1| inosine-5'-monophosphate dehydrogenase [Acidovorax ebreus TPSY]
 gi|120606966|gb|ABM42706.1| inosine-5'-monophosphate dehydrogenase [Acidovorax sp. JS42]
 gi|221729907|gb|ACM32727.1| inosine-5'-monophosphate dehydrogenase [Acidovorax ebreus TPSY]
          Length = 491

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 64/169 (37%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAAEVSKVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +          V D G K+ GI+T  D+      D+    V ++M 
Sbjct: 97  VVITPEHTVLQVLELSENLGISGFPVCD-GGKVVGIVTSRDVRFETRYDV---KVREIMT 152

Query: 291 KNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              K+I     + T    A  LL +H +  L+VV+D  +  G++   D+
Sbjct: 153 PREKLITVNEKDGTTPAQAKALLNRHKLERLLVVNDAFELKGLITVKDI 201


>gi|303247323|ref|ZP_07333596.1| CBS domain containing protein [Desulfovibrio fructosovorans JJ]
 gi|302491237|gb|EFL51126.1| CBS domain containing protein [Desulfovibrio fructosovorans JJ]
          Length = 153

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 54/144 (37%), Gaps = 25/144 (17%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--- 274
           +   ++MH    + ++         +    +     V VVD+  KL G+I+  DI R   
Sbjct: 1   MRIRNMMHKS--LAVIGPDVDFAALLAAYRQMESRLVYVVDKDGKLLGVISSYDILRVMF 58

Query: 275 ----------NFHKDLNTL----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                         D + L             D+M  +   +  D L   A  L+ +  +
Sbjct: 59  PFYLDSNLVKALPDDESVLRQAFSACKGQPAADIMTTDFAAVTPDALFLEAEALIAERGV 118

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           +VL V+DD  + +G V    +L++
Sbjct: 119 NVLPVIDDEGRLVGEVSRRAILKY 142


>gi|298529782|ref|ZP_07017185.1| CBS domain containing membrane protein [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511218|gb|EFI35121.1| CBS domain containing membrane protein [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 157

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 49/140 (35%), Gaps = 30/140 (21%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                  V     + +AI +L EK    V VVD+   L GII + D+             
Sbjct: 8   MTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLVAMQKKIPLPSMF 67

Query: 274 ----------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                           R   K +    VED M   P  + +DT L    +++       L
Sbjct: 68  TVLDSILPLGSTAKMDREIKK-IAATRVEDAMTPEPVAVKKDTPLEELAEIMVDKKYHTL 126

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            V  +  K +G+V   D+L+
Sbjct: 127 PVT-EGGKLVGVVGKSDVLK 145



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + ED+M  +P  +  +T ++ A+ LL + NI+ + VVD     +GI+   DL+
Sbjct: 2   TTAEDLMTSDPIRVHPETDISEAIHLLLEKNINGVPVVDQEDNLVGIICQSDLV 55


>gi|91773317|ref|YP_566009.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91712332|gb|ABE52259.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
          Length = 154

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 60/150 (40%), Gaps = 37/150 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
              ++ +      +     +L +K    V VVDE  K+ GI++E D+ +  +        
Sbjct: 7   MSSNVIVCSPQDTISSTAQLLKKKNISGVPVVDE-GKVVGIVSEVDLLKLLNIPEHGGLW 65

Query: 278 -------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                                     D+ +  V D+M K+   I  ++ +  A + + +H
Sbjct: 66  LPSPFEIIEIPIRELIGWEDTKKMLSDVGSKPVSDIMEKDVFTIGLESSVEDASRSMSRH 125

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLR--FGI 340
            I+ L VVD+  + +G++   D++R   GI
Sbjct: 126 KINRLPVVDN-GEIVGLITRGDIIRGLAGI 154



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D+M  N  V      ++   QLL++ NIS + VVD+  K +GIV  +DLL+ 
Sbjct: 3   VKDIMSSNVIVCSPQDTISSTAQLLKKKNISGVPVVDE-GKVVGIVSEVDLLKL 55


>gi|78485797|ref|YP_391722.1| nucleotidyl transferase [Thiomicrospira crunogena XCL-2]
 gi|78364083|gb|ABB42048.1| Nucleotidyl transferase [Thiomicrospira crunogena XCL-2]
          Length = 361

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 1/98 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V     + +A+T+L ++    V V D+   LKG +T+GD+ R+  K       V + M  
Sbjct: 11  VDEAVTVKEALTVLDKEALQIVLVTDQTGCLKGTLTDGDVRRSLLKGGGIDGPVVEAMNS 70

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           NP   +E    T   + + + +I  L +V+     +G+
Sbjct: 71  NPIAGIESQDKTAWKRKMLEKSIRHLPIVNAEGVMVGL 108


>gi|324993023|gb|EGC24943.1| CBS domain protein [Streptococcus sanguinis SK405]
 gi|324995668|gb|EGC27580.1| CBS domain protein [Streptococcus sanguinis SK678]
 gi|327461291|gb|EGF07622.1| CBS domain protein [Streptococcus sanguinis SK1]
 gi|327489150|gb|EGF20943.1| CBS domain protein [Streptococcus sanguinis SK1058]
          Length = 209

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDKDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|86143545|ref|ZP_01061930.1| hypothetical protein MED217_13139 [Leeuwenhoekiella blandensis
           MED217]
 gi|85829992|gb|EAQ48453.1| hypothetical protein MED217_13139 [Leeuwenhoekiella blandensis
           MED217]
          Length = 194

 Score = 71.1 bits (173), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/168 (23%), Positives = 62/168 (36%), Gaps = 12/168 (7%)

Query: 48  ELSFQFHCAVEKI--KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
                F      I       R+ + G+G+SG +   L   L   G     V    A    
Sbjct: 28  RQGVAFEQLAGLIAPLERAQRIFLMGMGRSGFMMQALGMRLMHLGFNVHIVGETTAP--- 84

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP-- 163
              IT+ D+++  S SGS+  +      A+R    ++  T+  +S++A  AD V+ LP  
Sbjct: 85  --AITKGDVLLAGSGSGSTTSIVNAAKTAKREGAAVLCFTTNMESLLADLADAVVVLPAA 142

Query: 164 -KEPESCPHGLAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            K  +          S   Q  L  GDAL   L      + +  +  H
Sbjct: 143 QKNKQEADVSQQYAGSLFEQALLIYGDALVQLLWNKGGKTADQLWQRH 190


>gi|302869460|ref|YP_003838097.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|302572319|gb|ADL48521.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
          Length = 138

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKN 292
              L+ A   + +   G V V D    + GI+T+ DI  R   ++++     +  V  K+
Sbjct: 18  NDTLMAAAQEMRDSAIGDVVVTDGDN-VVGIVTDRDITVRGVAENMDPTATRLNQVTSKD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +      A  L+R + +  L V+DD  + +G++   DL
Sbjct: 77  VVTVSQYDDAVAAADLMRTYAVRRLPVIDD-GRLVGLISMGDL 118



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M      +  +  L  A Q +R   I  ++V D     +GIV   D+   G+
Sbjct: 2   TTVGEFMTTRLVTMDGNDTLMAAAQEMRDSAIGDVVVTDGDN-VVGIVTDRDITVRGV 58


>gi|300866823|ref|ZP_07111501.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
 gi|300335173|emb|CBN56661.1| putative Diguanylate kinase [Oscillatoria sp. PCC 6506]
          Length = 1117

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 13/132 (9%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLID--AITILSEKRFGCVAVVDEGQK-------L 263
           L      +  V      +PL      +    A  I+ E R GCV V+++ ++       L
Sbjct: 36  LMGQIHSSCPVEQDIPCVPLNPPTTEVSQSLAAPIIGESRAGCVFVIEDSRQEISKPSIL 95

Query: 264 KGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMV 319
           KGI TE D+ +       L   +V +VM      + E  D  +  A+ LLRQH I  L +
Sbjct: 96  KGIFTERDLVQLIASGQKLRGTTVAEVMSMPVVTLTECKDQDVFTALILLRQHQIRHLPI 155

Query: 320 VDDCQKAIGIVH 331
           ++   + +G+V 
Sbjct: 156 LNTKGQLVGVVT 167



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            G++TE DI +      DL+ +  + VM      +  +  L VA Q ++Q  +  L+V  
Sbjct: 257 IGMVTERDIVQFQALELDLSQVEAQTVMSTPLFSLKPEDSLWVAHQEMQQRYVRRLVVAG 316

Query: 322 DCQKAIGIVHFLDLLR 337
           D  + +GI+   +LLR
Sbjct: 317 DRGELLGILTQTNLLR 332



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 52/124 (41%), Gaps = 4/124 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   L   G+       A  +     ++   K    +  A+ +L + +   + +++
Sbjct: 99  FTERDLVQLIASGQKLRGTTVAEVMSMPVVTLTECK-DQDVFTALILLRQHQIRHLPILN 157

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
              +L G++T   I +   +  N L   SV++VM  +         +    QL+ +H +S
Sbjct: 158 TKGQLVGVVTPESIRKAMLQPANILKMRSVDEVMALDVIQAPPTASVLSLAQLMAEHRVS 217

Query: 316 VLMV 319
            +++
Sbjct: 218 CIVI 221


>gi|121535360|ref|ZP_01667172.1| putative signal transduction protein with CBS domains [Thermosinus
           carboxydivorans Nor1]
 gi|121306052|gb|EAX46982.1| putative signal transduction protein with CBS domains [Thermosinus
           carboxydivorans Nor1]
          Length = 214

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 13/106 (12%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------- 274
                +   +     + DA  ++   +F  + VVD+  +L GI+T+ D+           
Sbjct: 5   KRMTPNPVTISPTATVADASELMRTHKFRRLPVVDK-GRLVGIVTDRDLREVSPSPATTL 63

Query: 275 ---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
                +  L  + V++VM  N   I +D  +  A  L+  + I  L
Sbjct: 64  SIFELNYLLAKMQVKEVMRTNVITIRDDATIEEAALLMYNNKIGGL 109


>gi|88604451|ref|YP_504629.1| XRE family transcriptional regulator [Methanospirillum hungatei
           JF-1]
 gi|88189913|gb|ABD42910.1| putative transcriptional regulator, XRE family [Methanospirillum
           hungatei JF-1]
          Length = 158

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 49/145 (33%), Gaps = 36/145 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
              +      G  + D   ++  ++ G + ++ EG  L GI+TE DI +           
Sbjct: 7   MTKNPVTCNAGDSIADVAGVMRSRKIGGIPIL-EGDVLVGIVTETDIIQLLMTKGPSDDL 65

Query: 279 ---------------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                      D+    + D+M K    I  D  +  A Q + +
Sbjct: 66  WLPSPLEIIELPVREFINWEHTKKALTDIRQKKITDIMSKPVITISPDDDIETAAQRMLE 125

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLL 336
             I  L V  +  K IGI+   D++
Sbjct: 126 KKIDRLCVT-EQNKLIGIITREDIV 149



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M KNP        +     ++R   I  + ++ +    +GIV   D+++ 
Sbjct: 3   VRDAMTKNPVTCNAGDSIADVAGVMRSRKIGGIPIL-EGDVLVGIVTETDIIQL 55



 Score = 36.8 bits (84), Expect = 5.5,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 23/70 (32%), Gaps = 1/70 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F       K  T              +  +     +  A   + EK+   + V  E  K
Sbjct: 80  EFINWEHTKKALTDIRQKKITDIMSKPVITISPDDDIETAAQRMLEKKIDRLCVT-EQNK 138

Query: 263 LKGIITEGDI 272
           L GIIT  DI
Sbjct: 139 LIGIITREDI 148


>gi|257054876|ref|YP_003132708.1| CBS domain-containing protein [Saccharomonospora viridis DSM 43017]
 gi|256584748|gb|ACU95881.1| CBS domain-containing protein [Saccharomonospora viridis DSM 43017]
          Length = 139

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 51/112 (45%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNT 282
                  +     + +A   + +   G V V D+  +L+GI+T+ D+  R   +  DL+ 
Sbjct: 9   MTPQPITLPSDTSVQEAARTMRDTDIGDVLVADD-GRLRGIVTDRDLVIRGLAERDDLSD 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + + +V  ++      D  +   +  +R+H I  + VVD+  +A+G+    D
Sbjct: 68  MRLHEVCSEHVITARPDEEVDNVIAKMREHAIRRIPVVDN-GEAVGMFSLGD 118



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + ++M   P  +  DT +  A + +R  +I  ++V DD  +  GIV   DL+  G+
Sbjct: 5   IRELMTPQPITLPSDTSVQEAARTMRDTDIGDVLVADD-GRLRGIVTDRDLVIRGL 59


>gi|153006867|ref|YP_001381192.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030440|gb|ABS28208.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
          Length = 641

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL- 283
               +        + D    ++ +R   + V D G  L G+++E D+  R     L+   
Sbjct: 177 CDREVAWCTREESVRDVAHRMTVRRCHTLLVRDAGGALVGVVSERDLVERALANGLDAAR 236

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V +VM    + +     L  AM+++ +  +  L V  D  + +G++   DLL
Sbjct: 237 PVSEVMTPAGEPMPAGLALAEAMEVMVRSGVRSLAVAGDRGEIVGLLADDDLL 289


>gi|326804264|ref|YP_004322082.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
 gi|326651490|gb|AEA01673.1| transcriptional repressor CcpN [Aerococcus urinae ACS-120-V-Col10a]
          Length = 209

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 6/105 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVMI 290
           +     + +AIT +     G + V DE Q+L+G+++  D+ R+      T S  V  +M 
Sbjct: 87  ITAKTTVYEAITTMFLYDNGSLYVTDEDQRLQGLVSRKDLLRSLATKGQTESPAVALIMT 146

Query: 291 KNP--KVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVH 331
           + P   V+ +DTL+  A +LL  H +  L VV++    + +G + 
Sbjct: 147 RMPNIVVVEKDTLVLEAGKLLVDHKVDSLPVVNNRQDYQVLGKIT 191



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L+ + V ++M  +P  I   T +  A+  +  ++   L V D+ Q+  G+V   DL
Sbjct: 68  LGQQLSEMKVAELM-ASPVNITAKTTVYEAITTMFLYDNGSLYVTDEDQRLQGLVSRKDL 126

Query: 336 LR 337
           LR
Sbjct: 127 LR 128


>gi|302855326|ref|XP_002959159.1| hypothetical protein VOLCADRAFT_47310 [Volvox carteri f.
           nagariensis]
 gi|300255478|gb|EFJ39782.1| hypothetical protein VOLCADRAFT_47310 [Volvox carteri f.
           nagariensis]
          Length = 109

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 43/104 (41%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNP 293
               L   I +L++     + V+D    + G+I+  DI R      L T  V+  M    
Sbjct: 6   PDATLQAIIPLLNK--VTGLPVLDSNGSVVGVISRKDIIRVRKSGGLMTEKVQKHMTSPA 63

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +     +  A  L+ ++ I  L VVDD    +G++   D+ +
Sbjct: 64  LTVPLRATVQEAADLMLKYAIRRLPVVDDDGHPLGLISRSDIFK 107



 Score = 42.6 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 16/78 (20%), Positives = 28/78 (35%), Gaps = 4/78 (5%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            S  D   +   G L T         H       V +   + +A  ++ +     + VVD
Sbjct: 36  ISRKDIIRVRKSGGLMTE----KVQKHMTSPALTVPLRATVQEAADLMLKYAIRRLPVVD 91

Query: 259 EGQKLKGIITEGDIFRNF 276
           +     G+I+  DIF+  
Sbjct: 92  DDGHPLGLISRSDIFKPL 109


>gi|262394531|ref|YP_003286385.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. Ex25]
 gi|262338125|gb|ACY51920.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio sp. Ex25]
          Length = 259

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 92  QVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSD 150

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++++S +G +     I   AR     +IAIT++  S +   + + +TL    ++  +
Sbjct: 151 NDVVVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASSLAITLDIPEDTDVY 209

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 210 --MPMASRVVQMTVIDVLATGFTLRRG 234


>gi|229592232|ref|YP_002874351.1| DNA-binding transcriptional regulator HexR [Pseudomonas fluorescens
           SBW25]
 gi|312962685|ref|ZP_07777174.1| transcriptional regulator HexR [Pseudomonas fluorescens WH6]
 gi|229364098|emb|CAY51708.1| hex regulon repressor [Pseudomonas fluorescens SBW25]
 gi|311283060|gb|EFQ61652.1| transcriptional regulator HexR [Pseudomonas fluorescens WH6]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQALDPALISKAVDLLIQAR-QIHFFGLGASAPVAMDALHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+E  
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARENGASVLGVTAE-N 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAKASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|295097344|emb|CBK86434.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 274

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 59/148 (39%), Gaps = 4/148 (2%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
                 +    + L      L      Q   A   +   +  V I G+  S  +G  L  
Sbjct: 89  DAIDNVVDESVQALQDTAKLLDR---AQLEQATLALHQAQS-VQIYGVAASAILGEYLHY 144

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G P+        +  +   ++++ L++ +S SGS+ +L  ++  AR+  + ++A+
Sbjct: 145 KLLRLGKPAQLFSDMHRAAMNATTLSKETLVVAISSSGSTRDLLHVVKLARKRGVKVLAL 204

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHG 172
           ++  +S +A  +D+ L   K       G
Sbjct: 205 SNTPRSPLASLSDLQLVAAKPEGPLSAG 232


>gi|315497568|ref|YP_004086372.1| signal transduction protein with cbs domains [Asticcacaulis
           excentricus CB 48]
 gi|315415580|gb|ADU12221.1| putative signal transduction protein with CBS domains
           [Asticcacaulis excentricus CB 48]
          Length = 143

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     +     +L  ++ G   V D   ++ GI++E DI     +       L V+D+M
Sbjct: 17  VSPEDTVAAVSALLHTRKVGAFVVADRLGRVAGIVSERDIIGALAQKGALALDLRVQDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +  V      +   ++ +    I  L V+ +  K  GIV   DL++  I
Sbjct: 77  TTDVIVARLGETVDSLLERMTDRRIRHLPVM-EGPKLTGIVSIGDLVKAKI 126



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 16/44 (36%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +  +     LL    +   +V D   +  GIV   D++  
Sbjct: 16  TVSPEDTVAAVSALLHTRKVGAFVVADRLGRVAGIVSERDIIGA 59


>gi|90415400|ref|ZP_01223334.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2207]
 gi|90332723|gb|EAS47893.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2207]
          Length = 282

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 59/170 (34%), Gaps = 7/170 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +    L  +  SL          AV  I A + RV   G G S  +          
Sbjct: 100 KVFDSTVDTLLKVRDSLA---LENLEAAVTAICAAQ-RVEFYGFGASAAVAFDAQHKFFR 155

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
               S         +     +   D++I +S SG +  L   +   R+    +I +    
Sbjct: 156 LQITSAAYSDPHLQNMSATSLQPGDVVIAISQSGRTQALLDSMELVRQAGGIVIGLAPSG 215

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              +A  A I + +  + +   +   P +S I  LA+ D LAI + + + 
Sbjct: 216 T-PIARRASIAIEIDAKEDIQIY--TPLSSRIAHLAVIDVLAIGVAQKKG 262


>gi|52550404|gb|AAU84253.1| conserved hypothetical protein [uncultured archaeon GZfos9C4]
          Length = 271

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+      +     G V +  E  K  GI+T+ DI        K  + +  +++M    
Sbjct: 156 TPVTKITKDMEVSGIGSVVITSED-KPVGIVTDRDIASKVIMKDKKASEIKAKEIMSSPL 214

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             I  +  +  A +L+ ++NI  + V+ +  + +GI+   ++L
Sbjct: 215 ITIKPEAPVEKACELMAENNIRRMPVM-ENNELVGIISVRNIL 256



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
               +      +     G V +  E  K  GI+T+ DI       +    + V+++M   
Sbjct: 16  EDVSVTIISRDMDLSGIGSVVITKED-KPVGIVTDRDISIKICATRRTGKVKVKEIMSSP 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I  + LL  A +LL  ++I  L V+++ +  +GIV   ++L
Sbjct: 75  LITIAPEALLEEACELLAANDIRRLPVMENDE-LVGIVSVRNIL 117



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 48/139 (34%), Gaps = 14/139 (10%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  +     L +A  +L+      + V+ E  +L GI++  +I  
Sbjct: 60  RRTGKVKVKEIMSSPLITIAPEALLEEACELLAANDIRRLPVM-ENDELVGIVSVRNILT 118

Query: 275 NFHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
              + ++             L V DVM        E T +T   + +    I  +++  +
Sbjct: 119 RAPEHVHRFYPAEGEVVPERLEVGDVMTLEVITEDEVTPVTKITKDMEVSGIGSVVITSE 178

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +GIV   D+    I+
Sbjct: 179 D-KPVGIVTDRDIASKVIM 196



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VEDVM        ED  +T+  + +    I   +V+    K +GIV   D+
Sbjct: 3   VEDVMTPKVITEDEDVSVTIISRDMDLSGIGS-VVITKEDKPVGIVTDRDI 52


>gi|238762961|ref|ZP_04623928.1| Hex regulon repressor [Yersinia kristensenii ATCC 33638]
 gi|238698719|gb|EEP91469.1| Hex regulon repressor [Yersinia kristensenii ATCC 33638]
          Length = 301

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ +         + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 115 MASLDMAKNNLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFD 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 174 DIVMQRMSCMNSNEGDVVVLISHTGRTKSLVELAQLARENDATVIAITSR-DTPLANEAT 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 233 LPLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 276


>gi|116180466|ref|XP_001220082.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
 gi|88185158|gb|EAQ92626.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
          Length = 540

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 67/189 (35%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + + L  P   +       P  S+ M       +AI +            V+H       
Sbjct: 63  SAVALDSPITKKITL--KTPLVSSPMDTVTEHDMAIHMALQGGLG-----VIHHNCAPEA 115

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            +++    + +AI +  +  FG   V + G+   KL GI+T
Sbjct: 116 QADMVRKVKRYENGFILDPVVIQRETTVGEAIALKEKWGFGGFPVTESGKLGSKLLGIVT 175

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F  DL+   V +VM+ +         L  A ++L +     L +VD+    + 
Sbjct: 176 NRDI--QFEDDLSK-PVSNVMVTDLITAPAGVTLAQANKILAESKKGKLPIVDEEGNLVS 232

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 233 MISRSDLTK 241



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 15/110 (13%)

Query: 190 AIALLESRNFSENDFYVLHPGGKLGTLFVCA-------SDVMHSGDSIPLV------KIG 236
           AIAL E   F    F V   G     L            D +    S  +V        G
Sbjct: 146 AIALKEKWGFGG--FPVTESGKLGSKLLGIVTNRDIQFEDDLSKPVSNVMVTDLITAPAG 203

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             L  A  IL+E + G + +VDE   L  +I+  D+ +N    L++ + +
Sbjct: 204 VTLAQANKILAESKKGKLPIVDEEGNLVSMISRSDLTKNLDFPLSSKTAD 253


>gi|330504337|ref|YP_004381206.1| DNA-binding transcriptional regulator HexR [Pseudomonas mendocina
           NK-01]
 gi|328918623|gb|AEB59454.1| DNA-binding transcriptional regulator HexR [Pseudomonas mendocina
           NK-01]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ Q         AV+ +   + ++   G+G S  +                   
Sbjct: 107 IASLDSACQSLDPQHVSRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAHS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +++S++G + EL  +   AR     ++ +T+   S +A  + 
Sbjct: 166 DVLMQRMIASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAKAST 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 225 LSLDIPLPEDTDIY--MPMTSRIIQLTVLDVLATGVTLRRG 263


>gi|308070516|ref|YP_003872121.1| transcriptional regulator [Paenibacillus polymyxa E681]
 gi|305859795|gb|ADM71583.1| Putative HTH-type transcriptional regulator [Paenibacillus polymyxa
           E681]
          Length = 288

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/178 (20%), Positives = 63/178 (35%), Gaps = 9/178 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             +    +S+  + +     +   A+  + A   R+ + G+  S  +       L   G 
Sbjct: 101 AIQANHTASIADTTRLLDYDKLEQAIAWLSATS-RIDLYGMATSSIVAQDFYQKLIRIGK 159

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            S     +         +   D+   +S+SG + E  A L  A+      +++TS   + 
Sbjct: 160 NSTAFADSHMQITSASSLGAGDVAFAVSYSGETQETIAALSCAKEQGAKTLSLTSFGNNT 219

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
           +A  ADI L      E    G     S I QL I D L   ++ +      DF    P
Sbjct: 220 LAGLADIALFSSSLEEGMRRGD--MASRIAQLHIIDILFTGMVSA------DFDKYIP 269


>gi|262277834|ref|ZP_06055627.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium HIMB114]
 gi|262224937|gb|EEY75396.1| putative signal-transduction protein with CBS domains [alpha
           proteobacterium HIMB114]
          Length = 486

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKN 292
                ++DA+    EK    +   ++ +++ GI+T  DIF+ F  K    + ++D+M   
Sbjct: 26  NENDLVVDAVKRAVEKNKETILAQNKNEEIIGIVTLKDIFKKFVTKFGQEIKIKDIMTSP 85

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLL 336
              +    LL  A+ ++R++N + + V++D  K  IGI++  D L
Sbjct: 86  VIYVNMSDLLFHAVGIMRKNNFTHIPVLNDRNKEVIGILNLSDAL 130



 Score = 36.4 bits (83), Expect = 6.5,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 27/60 (45%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +L T    D    N   + E+ L+  A++   + N   ++  +  ++ IGIV   D+ + 
Sbjct: 8   ELFTKKSGDYASSNYICLNENDLVVDAVKRAVEKNKETILAQNKNEEIIGIVTLKDIFKK 67


>gi|302544470|ref|ZP_07296812.1| putative RpiR-family transcriptional regulator [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302462088|gb|EFL25181.1| putative RpiR-family transcriptional regulator [Streptomyces
           himastatinicus ATCC 53653]
          Length = 310

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + GIG S  +   L   L   G  +        +  +   +   D+ + ++ SG + 
Sbjct: 154 RIDVYGIGASNLVAQDLVQKLLRIGLIAHAHADPHQAITNAVQLHSRDVALAITHSGRTT 213

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      +A +AD+VLT     ES     A  +S   QL +
Sbjct: 214 DVIEPLRVAFERGATTIAITGRPDGEIAQYADLVLTTSTARESE-LRPAAMSSRTSQLLV 272

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 273 VDCLFIGVAQR 283


>gi|107022910|ref|YP_621237.1| CBS domain-containing protein [Burkholderia cenocepacia AU 1054]
 gi|116686847|ref|YP_840094.1| CBS domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|105893099|gb|ABF76264.1| CBS domain containing membrane protein [Burkholderia cenocepacia AU
           1054]
 gi|116652562|gb|ABK13201.1| CBS domain containing membrane protein [Burkholderia cenocepacia
           HI2424]
          Length = 143

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAQLMERYDIGALPVCD-NNRLVGMVTDRDLAVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++V    P     +D  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RIQEVAS-GPIEWCFDDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   I     +  A QL+ +++I  L V D+  + +G+V   DL
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAQLMERYDIGALPVCDN-NRLVGMVTDRDL 53


>gi|284162397|ref|YP_003401020.1| hypothetical protein Arcpr_1296 [Archaeoglobus profundus DSM 5631]
 gi|284012394|gb|ADB58347.1| CBS domain containing membrane protein [Archaeoglobus profundus DSM
           5631]
          Length = 259

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 48/104 (46%), Gaps = 4/104 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + DAI ++ E       VVDE   L G ++  D+     K   T+ ++D+M K  
Sbjct: 18  SPENTVEDAIRLIEETGHDGFPVVDEDGMLVGYVSSIDLL----KKDPTMKIKDIMKKEV 73

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V  E   L    +++ +   S L VVDD  + +GI+   D++R
Sbjct: 74  HVAKEYMPLKDVARVMFRTGHSKLPVVDDRGRLVGIISNTDVIR 117



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L V+D M KN   +  +  +  A++L+ +       VVD+    +G V  +DLL+ 
Sbjct: 1   MAKLRVKDYMTKNVVTLSPENTVEDAIRLIEETGHDGFPVVDEDGMLVGYVSSIDLLKK 59



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 22/49 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               + + K   PL D   ++       + VVD+  +L GII+  D+ R
Sbjct: 69  MKKEVHVAKEYMPLKDVARVMFRTGHSKLPVVDDRGRLVGIISNTDVIR 117


>gi|322418648|ref|YP_004197871.1| CBS domain containing membrane protein [Geobacter sp. M18]
 gi|320125035|gb|ADW12595.1| CBS domain containing membrane protein [Geobacter sp. M18]
          Length = 149

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 58/139 (41%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V+    + D   + +E+R   V VVD+   L GI++E D+             
Sbjct: 8   MTTDVITVRRDTTVRDLAKLFAERRISSVPVVDDEGLLVGIVSESDLIEQDKPLHIPTVI 67

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F K+L  +   +V D+  ++   +  D  ++   +++    +  + 
Sbjct: 68  SIFDWVIYLESDKRFEKELQKMTGQTVGDIYSQDVACVGPDAPVSEVAEIMTSKKVQAVP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV + ++ +GI+  +D++R
Sbjct: 128 VV-EGRRVVGIIGRIDMVR 145



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +++M  +   +  DT +    +L  +  IS + VVDD    +GIV   DL+
Sbjct: 2   MKAKEIMTTDVITVRRDTTVRDLAKLFAERRISSVPVVDDEGLLVGIVSESDLI 55



 Score = 36.4 bits (83), Expect = 6.6,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             +  V    P+ +   I++ K+   V VV EG+++ GII   D+ R  
Sbjct: 100 QDVACVGPDAPVSEVAEIMTSKKVQAVPVV-EGRRVVGIIGRIDMVRTM 147


>gi|75675513|ref|YP_317934.1| hypothetical protein Nwi_1321 [Nitrobacter winogradskyi Nb-255]
 gi|74420383|gb|ABA04582.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 142

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    L  A+ ILSE++ G V VV  G +++GI++E D+ R   +         V   M
Sbjct: 17  VEPDVKLSAALRILSERQIGSVIVV-SGARIEGILSERDVVRALDEHGAAALDQPVSAAM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +          +   M+++       L VV++  K +G+V   D+++  +
Sbjct: 76  TRKVVSCRLSDTVAHLMEVMTAERFRHLPVVEE-GKLVGLVSIGDVVKLRL 125


>gi|189347818|ref|YP_001944347.1| signal-transduction protein with CBS domains [Chlorobium limicola
           DSM 245]
 gi|189341965|gb|ACD91368.1| putative signal-transduction protein with CBS domains [Chlorobium
           limicola DSM 245]
          Length = 148

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                 ++K  C + +A+ I+   +   + V         GI+TE DI           H
Sbjct: 16  MQKDFQMIKGSCTVAEALQIMKRTKQSGLIVEPRNEDDCYGIVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    I  +  +  A++L+++ N+  L V+ +  K IG+++  D+L+
Sbjct: 76  RDPWNTPVFQIMSKPIISINPELRVKYALRLMKRTNVRRLTVM-EGNKVIGVLNMTDVLQ 134

Query: 338 F 338
            
Sbjct: 135 A 135


>gi|326777606|ref|ZP_08236871.1| transcriptional regulator, RpiR family [Streptomyces cf. griseus
           XylebKG-1]
 gi|326657939|gb|EGE42785.1| transcriptional regulator, RpiR family [Streptomyces cf. griseus
           XylebKG-1]
          Length = 301

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 147 RIDVYGVGASSLVGQDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRSGDVAIAITHSGSTG 206

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V  +AD VLT     ES     A  +S   QL +
Sbjct: 207 DVIEPLRVAFDHGATTIAITGRPDGPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 265

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 266 VDCLFIGVAQR 276


>gi|191639278|ref|YP_001988444.1| YqzB [Lactobacillus casei BL23]
 gi|190713580|emb|CAQ67586.1| YqzB [Lactobacillus casei BL23]
 gi|327383359|gb|AEA54835.1| CBS domain containing protein [Lactobacillus casei LC2W]
 gi|327386542|gb|AEA58016.1| CBS domain containing protein [Lactobacillus casei BD-II]
          Length = 207

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R  F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L VV +      IG + 
Sbjct: 150 MPNVITVSADTSIIAASKLLLKHNVDSLPVVQNAGDTHVIGKIT 193



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 87  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 132


>gi|114568055|ref|YP_755209.1| signal transduction protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338990|gb|ABI69838.1| putative signal transduction protein with CBS domains
           [Syntrophomonas wolfei subsp. wolfei str. Goettingen]
          Length = 220

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 58/128 (45%), Gaps = 16/128 (12%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
              + +  V++   L +A  ++ E     + V+D+  +L GIIT  D+ +          
Sbjct: 6   RMSEDVITVEMNTSLTEAFRLMKENNIRRLPVMDK-GRLTGIITLTDLNQAAPSSATSLS 64

Query: 276 ---FHKDLNTLSVEDVMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +  L    ++D++ K  K   I  +  +  A +++R++ +S L V+ + +K +GIV
Sbjct: 65  IHELNYLLAKTKIKDIVPKKQKVLTIGPENYIETAAKIMRENKVSGLPVL-EQEKLVGIV 123

Query: 331 HFLDLLRF 338
              D+   
Sbjct: 124 TETDIFDA 131



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+D M ++   +  +T LT A +L++++NI  L V+D   +  GI+   DL + 
Sbjct: 1   MKVKDRMSEDVITVEMNTSLTEAFRLMKENNIRRLPVMDK-GRLTGIITLTDLNQA 55


>gi|242398419|ref|YP_002993843.1| Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus sibiricus MM
           739]
 gi|242264812|gb|ACS89494.1| Bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus sibiricus MM
           739]
          Length = 406

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/153 (20%), Positives = 61/153 (39%), Gaps = 9/153 (5%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +TR+   L     +Q  ++ I      + ++ +SL+     Q    V+ +     ++ I 
Sbjct: 199 ITRRILDLFWAEYMQTIVKVIQDITDHIKTVATSLK---LEQVRGMVDAMIGA-NKIFIY 254

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G+SG +G   A  L       + V                DL+I +S SG +  +   
Sbjct: 255 GAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEEGDLLIAISGSGETRTIVDA 309

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
              A+     ++ ITS   S +   +D+V+ +P
Sbjct: 310 AEIAKNQGGKVVGITSYKNSTLGKLSDVVVEIP 342


>gi|116753620|ref|YP_842738.1| signal transduction protein [Methanosaeta thermophila PT]
 gi|116665071|gb|ABK14098.1| putative signal transduction protein with CBS domains [Methanosaeta
           thermophila PT]
          Length = 320

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                + +A+ I+ E+  G + +VDE  ++K I+TE D            +V D M  N 
Sbjct: 133 PDTASVDEALRIMYERNVGGLPIVDERSRIKAIVTEEDFVEVVRNTDIDTTVSDYMSPNV 192

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   +    +++ Q     L ++       GI+   D++++
Sbjct: 193 VTAPASMSIEKTSRMIVQKGFRRLPII-QDGILTGIITASDIMKY 236



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/120 (17%), Positives = 47/120 (39%), Gaps = 17/120 (14%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDI-------------FRNFHKD 279
                +I AI I++   F  + + D G  +L G +T  DI              + +  +
Sbjct: 53  PPTTTIIGAIKIMNSYGFRRLPIADAGTNRLLGFVTCVDIVDFLGGGIRHNLVRKKYEGN 112

Query: 280 LN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +       + ++M        +   +  A++++ + N+  L +VD+  +   IV   D +
Sbjct: 113 ILAAINAEIREIMSTKLISAPDTASVDEALRIMYERNVGGLPIVDERSRIKAIVTEEDFV 172



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 20/152 (13%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +E DF  +     +    +  +   +   ++        +     ++ +K F  + ++ +
Sbjct: 167 TEEDFVEV-----VRNTDIDTTVSDYMSPNVVTAPASMSIEKTSRMIVQKGFRRLPII-Q 220

Query: 260 GQKLKGIITEGDIFRNFHKD-----LNTLSVEDVM--------IKNPKVILEDTLLTVAM 306
              L GIIT  DI +          + T  + +VM         ++  +    T L  A 
Sbjct: 221 DGILTGIITASDIMKYMASGEAFSKIITGDIREVMEQPIKSLIKRSLIMTDPRTRLKDAA 280

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+ + ++  L V+ +    +GI+   D LR 
Sbjct: 281 NLMVEKDVGSLPVM-EGGSMVGIITERDFLRA 311



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               L DA  ++ EK  G + V+ EG  + GIITE D  R   +
Sbjct: 272 PRTRLKDAANLMVEKDVGSLPVM-EGGSMVGIITERDFLRALAE 314



 Score = 35.6 bits (81), Expect = 10.0,   Method: Composition-based stats.
 Identities = 7/53 (13%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDLL 336
           +  +           T +  A++++  +    L + D    + +G V  +D++
Sbjct: 41  ILSIASTEVVTAPPTTTIIGAIKIMNSYGFRRLPIADAGTNRLLGFVTCVDIV 93


>gi|145219711|ref|YP_001130420.1| cyclic nucleotide-binding protein [Prosthecochloris vibrioformis
           DSM 265]
 gi|145205875|gb|ABP36918.1| cyclic nucleotide-binding protein [Chlorobium phaeovibrioides DSM
           265]
          Length = 649

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 18/110 (16%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
                 + +A  I+++   G + V        GIIT+ D+ +        +N   V ++M
Sbjct: 183 CPPDITIREAAKIMADCNIGSILVASPANHPLGIITDTDLRKKVVAMAGAVNERPVNEIM 242

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAI-GIVHFLDLL 336
                 I     +   + L+ +  +    + +D      I G++   D++
Sbjct: 243 SSPVYTITGGKTVADMVMLMVKTKLRHFCITEDGTPGSPIAGMISEHDII 292



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 26/65 (40%), Gaps = 6/65 (9%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           H+ L    V  VM         D  +  A +++   NI  ++V       +GI+   DL 
Sbjct: 169 HETLEVQPVTSVMT-----CPPDITIREAAKIMADCNIGSILVASPANHPLGIITDTDL- 222

Query: 337 RFGII 341
           R  ++
Sbjct: 223 RKKVV 227


>gi|299066573|emb|CBJ37763.1| conserved protein of unknown function, CBS
           (cystathionine-beta-synthase) domain [Ralstonia
           solanacearum CMR15]
          Length = 151

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 218 VCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD----I 272
           +  SD++H  G+++  V     L  A+  +SE   G + VV E  +L G++T  +    +
Sbjct: 1   MKVSDILHVKGNTLYTVAPETKLQVAVQTMSEYDIGSL-VVMEYGELVGMLTFREIILVL 59

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            RN  K  +  ++  VM  +P     +T +    +++ + +   L V+D+ +  +G++ F
Sbjct: 60  ARNNGKVDDGTTIRKVMDDHPLTCTPETEVNEVRRMMLERHARYLPVLDN-RTLMGVISF 118

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 119 YDVAKA 124


>gi|290963203|ref|YP_003494385.1| cyclic-nucleotide signal transduction protein [Streptomyces scabiei
           87.22]
 gi|260652729|emb|CBG75862.1| putative cyclic-nucleotide signal transduction protein
           [Streptomyces scabiei 87.22]
          Length = 609

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 46/127 (36%), Gaps = 7/127 (5%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G LG      S  M     +       P+ D    +S+    C  V        GIIT+ 
Sbjct: 134 GLLGQSRAPVSQFMRP---VVWCSHSTPVRDVAVAISDADQSCALVRLHEG--LGIITDQ 188

Query: 271 DIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           D  R     L T      ++  +   ++   T L  A   + +  +  L+V DD  +  G
Sbjct: 189 DFRRKVATGLLTTGAPARELATRPVVMVDARTPLATAFVQMVESGVHHLVVTDDNGRPAG 248

Query: 329 IVHFLDL 335
           +V  +DL
Sbjct: 249 VVRAIDL 255



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 3/74 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            ++ DF      G L T              + +V    PL  A   + E     + V D
Sbjct: 185 ITDQDFRRKVATGLLTTGAPARELATRP---VVMVDARTPLATAFVQMVESGVHHLVVTD 241

Query: 259 EGQKLKGIITEGDI 272
           +  +  G++   D+
Sbjct: 242 DNGRPAGVVRAIDL 255


>gi|21219416|ref|NP_625195.1| oxidoreductase [Streptomyces coelicolor A3(2)]
 gi|6562878|emb|CAB62687.1| putative oxidoreductase [Streptomyces coelicolor A3(2)]
          Length = 141

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
           V+    +  A  ++ E+  G V V      L G++T+ DI        +D    +V  V 
Sbjct: 16  VEPMTTVARAARLMREEDVGDVLVT-YDCDLFGVLTDRDIVLRGVADGRDSEATTVGAVC 74

Query: 290 IKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              P   +  D     A +L+ +H +  L VV+     +G+V   DL
Sbjct: 75  TPPPVVTLEPDDTTDRAAELMARHAVRRLPVVEHGGVPVGVVTLGDL 121


>gi|91226521|ref|ZP_01261270.1| hypothetical protein V12G01_19771 [Vibrio alginolyticus 12G01]
 gi|254229600|ref|ZP_04923012.1| transcriptional regulator, RpiR family protein [Vibrio sp. Ex25]
 gi|269968120|ref|ZP_06182155.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|91189153|gb|EAS75434.1| hypothetical protein V12G01_19771 [Vibrio alginolyticus 12G01]
 gi|151937883|gb|EDN56729.1| transcriptional regulator, RpiR family protein [Vibrio sp. Ex25]
 gi|269827251|gb|EEZ81550.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 284

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+++++S +G +     I   AR     +IAIT++  S +   + + +TL    ++  +
Sbjct: 176 NDVVVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASSLAITLDIPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|283787069|ref|YP_003366934.1| Allose utilisation regulator, AlsR [Citrobacter rodentium ICC168]
 gi|282950523|emb|CBG90188.1| Allose utilisation regulator, AlsR [Citrobacter rodentium ICC168]
          Length = 296

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 71/175 (40%), Gaps = 13/175 (7%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N      LR+II E + + ++          + H A       + R +  G G S  I +
Sbjct: 109 NKVFNITLRTII-EGQSIVNV---------DEIHRAARFFAQARQRDLY-GAGGSNAICA 157

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +       G        A        ++   D+++V++ SG + ++KA +  A++    
Sbjct: 158 DMQHKFLRIGVRCQTYPDAHIMMMSASLLKEGDVVLVVTHSGRTSDVKAAVELAKKNGAK 217

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           +I IT    S +A  AD ++  P          A  ++ I+QL + DA  +++ +
Sbjct: 218 IICITHSYHSPIAKLADFIICSPAPDTPLLGRNA--SARILQLTLLDAFFVSVAQ 270


>gi|262274602|ref|ZP_06052413.1| Signal transduction protein [Grimontia hollisae CIP 101886]
 gi|262221165|gb|EEY72479.1| Signal transduction protein [Grimontia hollisae CIP 101886]
          Length = 627

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 11/121 (9%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQ----KLKGIITEGDIF-RNFHK 278
            S   V     +  A  I++++    + V+    DE      ++ GIIT+ D+  R   K
Sbjct: 158 RSPVTVDCESSVRYAAQIMTDEEVSSLLVMTMESDEDGVEQERIAGIITDNDLRSRVVAK 217

Query: 279 DL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L     + +++      +  +  +  AM  + ++N+  L ++   QK IG+V   D++R
Sbjct: 218 GLPYETPISEILTPQIITLDHNAYVFEAMLTMLRNNLHHLPIL-KNQKPIGVVALSDIVR 276

Query: 338 F 338
           +
Sbjct: 277 Y 277



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 36/71 (50%), Gaps = 9/71 (12%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQ----KAIGIV 330
           DL T  V ++++++P  +  ++ +  A Q++    +S L+V+    D+      +  GI+
Sbjct: 146 DLATSKVTNLILRSPVTVDCESSVRYAAQIMTDEEVSSLLVMTMESDEDGVEQERIAGII 205

Query: 331 HFLDLLRFGII 341
              DL R  ++
Sbjct: 206 TDNDL-RSRVV 215


>gi|70725281|ref|YP_252195.1| hypothetical protein SH0280 [Staphylococcus haemolyticus JCSC1435]
 gi|68446005|dbj|BAE03589.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 268

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 55/145 (37%), Gaps = 3/145 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +       +K  + +V   G+G SG   S+        G        A        +++
Sbjct: 106 EKIKRLAHNLKTCR-QVNFAGLGSSGLTASEFYYRTMRMGIKGSVSTDAHQMKISASLLS 164

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ + +S SG + EL      AR     ++ IT+   S +  +AD+VL      +S  
Sbjct: 165 SRDMFVAISNSGETLELIEAAKIARNQGAYVVVITNFEGSALTKNADLVLIT--TAQSSN 222

Query: 171 HGLAPTTSAIMQLAIGDALAIALLE 195
           +      S I  L + D ++  LL 
Sbjct: 223 NDSKFINSQIATLFLLDIVSYLLLN 247


>gi|260768824|ref|ZP_05877758.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio furnissii CIP 102972]
 gi|260616854|gb|EEX42039.1| glucose repressor HexR for Entner-Doudoroff pathway RpiR family
           [Vibrio furnissii CIP 102972]
          Length = 284

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/147 (21%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPIACFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   A + + L    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKAASLSICLDAPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|146308164|ref|YP_001188629.1| DNA-binding transcriptional regulator HexR [Pseudomonas mendocina
           ymp]
 gi|145576365|gb|ABP85897.1| transcriptional regulator, RpiR family [Pseudomonas mendocina ymp]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+++ Q         AV+ +   + ++   G+G S  +                   
Sbjct: 107 IASLDAACQSLDPQHVSRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAHS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +++S++G + EL  +   AR     ++ +T+   S +A  + 
Sbjct: 166 DVLMQRMIASVAHTGDLFVIISYTGRTRELVEVARLARENGASVLGLTA-AGSPLAKAST 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 225 LSLDIPLPEDTDIY--MPMTSRIIQLTVLDVLATGVTLRRG 263


>gi|90413663|ref|ZP_01221652.1| putative rpiR-family transcriptional regulatory protein
           [Photobacterium profundum 3TCK]
 gi|90325284|gb|EAS41778.1| putative rpiR-family transcriptional regulatory protein
           [Photobacterium profundum 3TCK]
          Length = 290

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/156 (21%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L            ++IK+ K  V   G+G SG       +     G     +    
Sbjct: 120 LAETLNLLNFDTLEKVAKQIKSAKA-VYFFGVGSSGITAEDAKNKFMRIGFNVDALTNNH 178

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++ + DL + +S SGSS E    L  A+      +AIT   +S +   +D VL
Sbjct: 179 FMYMKASLLQKGDLAVGISHSGSSKETTKALQLAKDAGADTVAITHNPRSAITEFSDFVL 238

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            + I QL + D +   L+  
Sbjct: 239 VNGNRQGKLQGDSI--GTKISQLFVLDLVYALLVNE 272


>gi|54307935|ref|YP_128955.1| putative acetoin utilization protein AcuB [Photobacterium profundum
           SS9]
 gi|46912361|emb|CAG19153.1| Putative acetoin utilization protein AcuB [Photobacterium profundum
           SS9]
          Length = 151

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 12/127 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
               +   ++    L DA  I+ +     + V D  ++L GI+T+ D+       L    
Sbjct: 7   MMTPNPHTLQPHNTLADAKAIMEDVGIRHIPVTDMDEQLIGIVTQRDVLSAQESSLEHIT 66

Query: 282 --------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                    + +E  M +    +     L  A   +++H I  L VV+  ++ +GI+   
Sbjct: 67  KNNFLSTLDIPLEKCMHRTLMSVDPHASLKEAAVYMQKHKIGCLPVVEK-KRLVGIITDA 125

Query: 334 DLLRFGI 340
           D +   I
Sbjct: 126 DFVSIAI 132



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V D+M  NP  +     L  A  ++    I  + V D  ++ IGIV   D+L  
Sbjct: 2   FTVSDMMTPNPHTLQPHNTLADAKAIMEDVGIRHIPVTDMDEQLIGIVTQRDVLSA 57


>gi|332295214|ref|YP_004437137.1| putative signal transduction protein with CBS domains
           [Thermodesulfobium narugense DSM 14796]
 gi|332178317|gb|AEE14006.1| putative signal transduction protein with CBS domains
           [Thermodesulfobium narugense DSM 14796]
          Length = 123

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF---HKDLNTLSVED 287
           +V     + DAI  + EKR   + V     +   GI+T  DI        ++L ++ + +
Sbjct: 13  MVGESATVADAIEFMKEKRVRSLIVDRHNDKDSYGIVTTSDIIFKTVGKKENLKSVKIGE 72

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M K    I  ++ +  A+ ++    I+ L V+D   + +GI+  +D+L
Sbjct: 73  IMTKPAISINSNSSIEDAVGMMADLKITHLPVIDK-NQLVGIISNIDIL 120



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLL 336
           + V+D+M  +  ++ E   +  A++ +++  +  L+V     K + GIV   D++
Sbjct: 1   MKVKDIMTTDVLMVGESATVADAIEFMKEKRVRSLIVDRHNDKDSYGIVTTSDII 55


>gi|325958056|ref|YP_004289522.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
 gi|325329488|gb|ADZ08550.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
          Length = 273

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------- 276
              D I  V     L+ A   L +   G + VV E   L GI+T  D+            
Sbjct: 142 RMQDEIITVSPTDRLVHARRCLIDNGVGRLPVV-EDDVLVGILTAKDVANAMISFRKIVP 200

Query: 277 ----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  +  L VEDVM +N + I  ++ L     ++ ++  S + V +D    +GI+  
Sbjct: 201 DKYKNSRIRNLLVEDVMTQNVRTIDPESTLEQVSTMMLENRYSGIPV-EDEGSLVGIITK 259

Query: 333 LDLLRF 338
            DL+++
Sbjct: 260 TDLIKY 265



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 11/116 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDI-FRNFHKDL 280
             + I LV     + DA+ ++ + +   + VV+      ++L G++TE DI  R      
Sbjct: 7   MKEEIVLVDKDQNIPDALKLMKKHKISRLPVVNTNSDHVRELVGMVTEKDIAMRLGSSKY 66

Query: 281 NTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             L      V  VM ++P V+  D  L    Q++ Q  +  + VV   +  IG++ 
Sbjct: 67  GKLPPSHFHVSTVMEQDPLVVEADQSLGTVAQIMIQEKLDGMPVVSKDE-VIGVLT 121



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/143 (20%), Positives = 53/143 (37%), Gaps = 8/143 (5%)

Query: 200 SENDFYV---LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           +E D  +       GKL       S VM       +V+    L     I+ +++   + V
Sbjct: 53  TEKDIAMRLGSSKYGKLPPSHFHVSTVMEQDPL--VVEADQSLGTVAQIMIQEKLDGMPV 110

Query: 257 VDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V + + + G++T+         K  N   + D M      +     L  A + L  + + 
Sbjct: 111 VSKDE-VIGVLTKTSFLEICKGKPYNVTKISDRMQDEIITVSPTDRLVHARRCLIDNGVG 169

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            L VV+D    +GI+   D+   
Sbjct: 170 RLPVVEDD-VLVGILTAKDVANA 191



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 5/60 (8%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLDL-LRFG 339
           V+D+M +   ++ +D  +  A++L+++H IS L VV    D  ++ +G+V   D+ +R G
Sbjct: 3   VKDIMKEEIVLVDKDQNIPDALKLMKKHKISRLPVVNTNSDHVRELVGMVTEKDIAMRLG 62


>gi|315303473|ref|ZP_07874060.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria ivanovii FSL F6-596]
 gi|313628155|gb|EFR96701.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria ivanovii FSL F6-596]
          Length = 298

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/152 (17%), Positives = 57/152 (37%), Gaps = 2/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++  +       +   A + +      +   G+G S  +   ++      G       
Sbjct: 121 IQTMNDTASQLNETKILEACDLLGDADT-IYTYGVGASWLVAEDISQKWLRAGKHVLATQ 179

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A           +  + I +S SG + E+  ++  A+   + +I++T    + +   AD
Sbjct: 180 DAHVLAMAFATGKKRAVFIAISNSGETSEVLQLVEQAKLNHVLVISLTRFGHNKLKEQAD 239

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           + L   + PE+     A T+S   QL + D L
Sbjct: 240 LSLETSRAPEAEIRSTA-TSSRQAQLLVVDIL 270


>gi|148656960|ref|YP_001277165.1| polynucleotide adenylyltransferase region [Roseiflexus sp. RS-1]
 gi|148569070|gb|ABQ91215.1| Polynucleotide adenylyltransferase region [Roseiflexus sp. RS-1]
          Length = 874

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 45/116 (38%), Gaps = 3/116 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +    +   +  A  +L     G + VV+    ++G+I+  D+ R     L    +
Sbjct: 311 MTRPVHTAPLDATVAQAEELLLRYGHGALPVVNHDGVVQGLISRRDLDRALRHGLRDAPL 370

Query: 286 EDVMIKNPKVILEDTLLTV---AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +   P ++  D  L     A+          L+VVD  ++ +GI+   DLLR 
Sbjct: 371 ARYLWHGPTLLSPDASLATVRSALAADNGDRTGRLLVVDSQKRLLGIITRSDLLRA 426



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 24/57 (42%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+  D+M +       D  +  A +LL ++    L VV+      G++   DL R 
Sbjct: 304 ALTAADIMTRPVHTAPLDATVAQAEELLLRYGHGALPVVNHDGVVQGLISRRDLDRA 360



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 12/76 (15%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             +  A+   +  R G + VVD  ++L GIIT  D+ R         +   V        
Sbjct: 388 ATVRSALAADNGDRTGRLLVVDSQKRLLGIITRSDLLRA-------WAAGQVAGT----- 435

Query: 297 LEDTLLTVAMQLLRQH 312
            +  L+  A++     
Sbjct: 436 SDHDLVGEALERFLDR 451


>gi|312136728|ref|YP_004004065.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224447|gb|ADP77303.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 134

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                +  A   +     G + VV +  KL G+IT  DI     K+   L V+D+M KN 
Sbjct: 26  NPDDTVAAAKLKMVRANVGGLPVV-KNGKLVGLITHRDILLA-GKEALNLRVKDLMSKNL 83

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+  DT +    +++ +     + VV +  K +G++    ++R 
Sbjct: 84  VVVGVDTSIKEISKIMSETGYQRIPVVINDNKLVGLITQSCIIRA 128



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +D+MIK+      D  +  A   + + N+  L VV    K +G++   D+L  G
Sbjct: 14  AQDIMIKDVLTANPDDTVAAAKLKMVRANVGGLPVV-KNGKLVGLITHRDILLAG 67



 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
              ++ +V +   + +   I+SE  +  + VV    KL G+IT+  I R   K L+
Sbjct: 79  MSKNLVVVGVDTSIKEISKIMSETGYQRIPVVINDNKLVGLITQSCIIRAVAKYLD 134


>gi|238895430|ref|YP_002920165.1| DNA-binding transcriptional regulator HexR [Klebsiella pneumoniae
           NTUH-K2044]
 gi|238547747|dbj|BAH64098.1| predicted DNA-binding transcriptional regulator [Klebsiella
           pneumoniae subsp. pneumoniae NTUH-K2044]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+           + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLDQVHHSLDMSAVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     +IA+TS   + +A  A
Sbjct: 161 DDIVLQRMSCMNCDDDDVVVIISHTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|261350089|ref|ZP_05975506.1| inosine-5-monophosphate dehydrogenase related protein I
           [Methanobrevibacter smithii DSM 2374]
 gi|288860875|gb|EFC93173.1| inosine-5-monophosphate dehydrogenase related protein I
           [Methanobrevibacter smithii DSM 2374]
          Length = 272

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 57/139 (41%), Gaps = 14/139 (10%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G  F   +      D I  V     L+ A  I+ +   G + V+D G +L G++T  D
Sbjct: 130 AVGRAFDKITVKEVMSDDIKAVSSQERLVHARRIMIDSHVGRLPVID-GDELVGMMTSKD 188

Query: 272 IFRNFHKDLNTLS------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + + F      +             VE+VM  NP  I +D  ++     +     + L V
Sbjct: 189 VMKAFINFRKNVPEKYQKTQIKEILVEEVMSDNPLSISKDASISEVANTMMDTGYNGLPV 248

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V+D    IGI+   D+LR 
Sbjct: 249 VEDNN-VIGIITQTDILRL 266



 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           V     L D   ++ E   G V +V +   + GI+++ D       +  + ++V++VM  
Sbjct: 87  VVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADFVTLAVGRAFDKITVKEVMSD 146

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + K +     L  A +++   ++  L V+D  +  +G++   D+++ 
Sbjct: 147 DIKAVSSQERLVHARRIMIDSHVGRLPVIDGDE-LVGMMTSKDVMKA 192



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFRNF----- 276
             + +  V     L D + +L++     + V+    D  ++L GII+E D+         
Sbjct: 7   MSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERDVADKLGSSKY 66

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + L +  VM+K+   ++E   L     L+ ++ I  + +V D    +GIV   D 
Sbjct: 67  ENMPASRLHISSVMVKDVISVVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADF 126

Query: 336 LRFGI 340
           +   +
Sbjct: 127 VTLAV 131



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLD 334
           + ++++M ++   + +D  L+  ++LL ++++S L V+    D  ++ +GI+   D
Sbjct: 1   MQIKNLMSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERD 56



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F    P     T            D+   +     + +    + +  +  + VV++   
Sbjct: 195 NFRKNVPEKYQKTQIKEILVEEVMSDNPLSISKDASISEVANTMMDTGYNGLPVVEDNN- 253

Query: 263 LKGIITEGDIFRNFHK 278
           + GIIT+ DI R   K
Sbjct: 254 VIGIITQTDILRLIAK 269


>gi|229917012|ref|YP_002885658.1| RpiR family transcriptional regulator [Exiguobacterium sp. AT1b]
 gi|229468441|gb|ACQ70213.1| transcriptional regulator, RpiR family [Exiguobacterium sp. AT1b]
          Length = 267

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 65/162 (40%), Gaps = 10/162 (6%)

Query: 4   YFSHFKSVTRKG---HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
            +S  K + +K     +L + ++++   RS I   +  + L          +     ++I
Sbjct: 60  SYSSLKLMMQKTLTETNLPQTTSLEPMQRSYIELIQTTAHLID------QDELLAICKEI 113

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            + +  V + G+G +G +  ++   L   G  +     + +   D  ++T +D++I  S 
Sbjct: 114 TSSRS-VHLYGLGNAGLVAQEMEYRLRRMGLLATTAFDSHSMVMDASIVTSEDVVIAFSN 172

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
           SG S E+   +  A+      +A      S +A   D  L  
Sbjct: 173 SGESREVVQAMQLAKESGCTTVAFVGYQHSPLAELVDYRLLT 214


>gi|182436992|ref|YP_001824711.1| RpiR family transcriptional regulator [Streptomyces griseus subsp.
           griseus NBRC 13350]
 gi|178465508|dbj|BAG20028.1| putative RpiR-family transcriptional regulator [Streptomyces
           griseus subsp. griseus NBRC 13350]
          Length = 305

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 151 RIDVYGVGASSLVGQDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRSGDVAIAITHSGSTG 210

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V  +AD VLT     ES     A  +S   QL +
Sbjct: 211 DVIEPLRVAFDHGATTIAITGRPDGPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 269

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 270 VDCLFIGVAQR 280


>gi|90413064|ref|ZP_01221061.1| putative transcriptional regulator [Photobacterium profundum 3TCK]
 gi|90325907|gb|EAS42353.1| putative transcriptional regulator [Photobacterium profundum 3TCK]
          Length = 284

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + +V+ +   K ++   G+G S  +     +       P             +   + 
Sbjct: 117 QINRSVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFDDIVMQRMSVINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++++S +G +  L  I   AR     +I IT++  S +     + + L    ++  +
Sbjct: 176 GDVVVMISHTGRTKSLVDIARIARENGATVIGITAK-DSPLDRECSLSICLDVPEDTDIY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|13476042|ref|NP_107612.1| hypothetical protein mlr7253 [Mesorhizobium loti MAFF303099]
 gi|14026802|dbj|BAB53398.1| mlr7253 [Mesorhizobium loti MAFF303099]
          Length = 286

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 51/125 (40%), Gaps = 1/125 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L S++ ++           +E +   + R+ + G+G S  +    +  L   G       
Sbjct: 107 LLSMQQTVAANSERIISRTLELLDGAR-RIHLVGVGASSLVARDFSYKLMKLGRNVLHDS 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     +   +   D++  LS+SG+S E   I   A +    +IA+T  + + ++  AD
Sbjct: 166 DSHIQMANAATLGPGDVLFALSYSGASIETLRIAELAAKRGTTVIAVTGLHDNPLSRVAD 225

Query: 158 IVLTL 162
           I L  
Sbjct: 226 IRLYT 230


>gi|319762647|ref|YP_004126584.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus
           denitrificans BC]
 gi|317117208|gb|ADU99696.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus
           denitrificans BC]
          Length = 491

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAQQQAAEVSRVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +          V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLELSENLGISGFPVCD-GGKVVGIVTSRDVRFETRYDV---KVSQIMT 152

Query: 291 KNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              K+I     + T    A  LL +H +  L+VV+D  +  G++   D+
Sbjct: 153 PREKLITVNEKDHTSPAQAKALLNKHKLERLLVVNDGFELKGLITVKDI 201


>gi|227511437|ref|ZP_03941486.1| acetoin utilization protein, CBS domain protein [Lactobacillus
           buchneri ATCC 11577]
 gi|227085388|gb|EEI20700.1| acetoin utilization protein, CBS domain protein [Lactobacillus
           buchneri ATCC 11577]
          Length = 216

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V     +  A+ ++       + V+D    L G+IT G I             
Sbjct: 7   MSTNVITVPPETKISVAVNLMKSNNIHRLPVID-NGHLVGLITAGIIQAASPSQATSLSI 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             ++  LN ++V+++M    + I  D  L  A+  + ++ + VL V+ + +  IGI+   
Sbjct: 66  YEYNYLLNKMTVKEIMETTVRTIGADDFLEDAIYKMLKYQVGVLPVISNNET-IGIITNN 124

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 125 DILKA 129



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +SV D M  N   +  +T ++VA+ L++ +NI  L V+D+    +G++        GII
Sbjct: 1   MSVRDFMSTNVITVPPETKISVAVNLMKSNNIHRLPVIDN-GHLVGLIT------AGII 52



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 43/112 (38%), Gaps = 10/112 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  +     L DAI  + + + G + V+   + + GIIT  DI + F   L+    
Sbjct: 81  METTVRTIGADDFLEDAIYKMLKYQVGVLPVISNNETI-GIITNNDILKAF---LDVTDY 136

Query: 286 EDVMIKNPKVILEDTL--LTVAMQLLRQH--NISVLMVVDDCQKAIGIVHFL 333
           ++        I +D    +    +++  +  NI  LMV         +V   
Sbjct: 137 KESATVVQVFIHQDRTGVIYEIGKIMADNNLNIQTLMVT-HQGTVK-VVEIH 186


>gi|15922085|ref|NP_377754.1| hypothetical protein ST1774 [Sulfolobus tokodaii str. 7]
 gi|15622873|dbj|BAB66863.1| 129aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 129

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
                + +   ++ ++  G V V+ +G+K+ GI+TE DI    H+ L+      ++   N
Sbjct: 15  PSNSTIKEVADMMIKENVGSV-VLKDGEKISGIVTERDIVNAVHRGLSLNSPAIEIASTN 73

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              I  +  +  A  L+ ++NI  L++ +   K +G++   D+ + 
Sbjct: 74  LIRIDYNKSIYDAFYLMTRNNIRHLII-EKDGKCVGVISIRDVAKA 118


>gi|255024730|ref|ZP_05296716.1| CBS domain protein [Listeria monocytogenes FSL J1-208]
          Length = 176

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 4/88 (4%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                 VV+   +L G++T  DI     K+  ++S+E VM KNP  +     +     ++
Sbjct: 34  GHSRFPVVNRAMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAHMM 89

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +I V+ VV D    IGIV   D+L+
Sbjct: 90  IWESIEVIPVVKDDLTLIGIVSRQDILK 117


>gi|300361086|ref|ZP_07057263.1| transcriptional regulator [Lactobacillus gasseri JV-V03]
 gi|300353705|gb|EFJ69576.1| transcriptional regulator [Lactobacillus gasseri JV-V03]
          Length = 279

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/182 (19%), Positives = 70/182 (38%), Gaps = 10/182 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             EK  +  + ++L    + +    +  I+A +  + I+  G +  + +         G 
Sbjct: 97  EIEKNKVGEIHATLNQIPTDELEKILSIIEASR-IIQISAEGDTYPVAADAVYKFNQIGL 155

Query: 92  PSF----FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
            SF     V  A+A   +LG   + D +IV+S SG S  L   +  A +  + +I+IT+ 
Sbjct: 156 LSFASGGNVETADAQTMNLG---KKDCLIVISNSGESAALLKEIKLAHKNKLKVISITNN 212

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  +D  L          +      S +    I +AL + L++       +    
Sbjct: 213 PASPIALASDYHLKTGVRQTILQNQYYF--SRVAAFTITEALFLLLIKRNEKRIENIKQH 270

Query: 208 HP 209
             
Sbjct: 271 EQ 272


>gi|220918486|ref|YP_002493790.1| protein of unknown function DUF190 [Anaeromyxobacter dehalogenans
           2CP-1]
 gi|219956340|gb|ACL66724.1| protein of unknown function DUF190 [Anaeromyxobacter dehalogenans
           2CP-1]
          Length = 433

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 56/160 (35%), Gaps = 27/160 (16%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P  +   L             +P +    PL +    ++  R     V+D+ ++ 
Sbjct: 263 FGKKEPIARELGLAGDVPLSRVMRRDVPAIHPESPLPEVFQAVTSTRLNRALVLDDERRP 322

Query: 264 KGIITEGDIF------------RNFHKDL---------------NTLSVEDVMIKNPKVI 296
            G++T+ ++             R   + L                  +  DVM ++    
Sbjct: 323 VGLVTDAELLERVTPALRPGAIRAIMQRLPFRHARGEESVAAHTRGGTAADVMSRHVATA 382

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            E  LL+ A+  + Q +  VL V D   + +GIV   DLL
Sbjct: 383 REHALLSEAIASMLQGDDKVLAVTDADGRVVGIVDRADLL 422



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 51/134 (38%), Gaps = 23/134 (17%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
               +  V    P+ + + +   K +  V VV EG +  GI+T  D+             
Sbjct: 125 MSRDVVTVARSTPVREVVELTLGKTYRAVPVV-EGGRPVGIVTSSDLVHRGGLGVRLDLL 183

Query: 273 ----FRNFHKDLNTLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                    + L  L+       +VM  +P  +     L  A + + +  +  L VVD+ 
Sbjct: 184 ATLDRPALQELLERLTQQRRTAAEVMTPDPVTVRSSASLPAAAERMARRRLKRLPVVDEA 243

Query: 324 QKAIGIVHFLDLLR 337
              +GIV  +DLLR
Sbjct: 244 GSLVGIVSRVDLLR 257



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 23/131 (17%), Positives = 47/131 (35%), Gaps = 13/131 (9%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                  +           V+    L  A   ++ +R   + VVDE   L GI++  D+ 
Sbjct: 197 RLTQQRRTAAEVMTPDPVTVRSSASLPAAAERMARRRLKRLPVVDEAGSLVGIVSRVDLL 256

Query: 274 RNFHKDL-------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           R                     + +  VM ++   I  ++ L    Q +    ++  +V+
Sbjct: 257 RTVGVGFGKKEPIARELGLAGDVPLSRVMRRDVPAIHPESPLPEVFQAVTSTRLNRALVL 316

Query: 321 DDCQKAIGIVH 331
           DD ++ +G+V 
Sbjct: 317 DDERRPVGLVT 327



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)

Query: 265 GIIT--EGDIF---RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           G+IT  + D+     +  +DL T + V DVM ++   +   T +   ++L        + 
Sbjct: 95  GLITVDDTDVLLFEPHPVRDLTTTAIVADVMSRDVVTVARSTPVREVVELTLGKTYRAVP 154

Query: 319 VVDDCQKAIGIVHFLDLLRFG 339
           VV +  + +GIV   DL+  G
Sbjct: 155 VV-EGGRPVGIVTSSDLVHRG 174


>gi|134098964|ref|YP_001104625.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
 gi|291006796|ref|ZP_06564769.1| signal-transduction protein [Saccharopolyspora erythraea NRRL 2338]
 gi|133911587|emb|CAM01700.1| putative signal-transduction protein with CBS domains
           [Saccharopolyspora erythraea NRRL 2338]
          Length = 203

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 21/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFR-NFHKDLNTL 283
               +  V+    +  A  IL+E  F  + VVD   +L  GI+TE D+ R     D  + 
Sbjct: 1   MSRPVVTVRDFDSIKKAAGILAEHGFTSLPVVDADSRLLVGIVTEADLIRDAIPPDPRSD 60

Query: 284 S------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           +                  V  +M ++       T        + +HN+  + V  + + 
Sbjct: 61  TRHETGHRSPVPSAPPPTLVSQIMTRSVHTAGPRTDCAEIAATMLEHNLRSVPVT-EDRV 119

Query: 326 AIGIVHFLDLLR 337
            +GIV   DL+R
Sbjct: 120 VVGIVTRRDLMR 131


>gi|254255551|ref|ZP_04948867.1| hypothetical protein BDAG_04896 [Burkholderia dolosa AUO158]
 gi|124901288|gb|EAY72038.1| hypothetical protein BDAG_04896 [Burkholderia dolosa AUO158]
          Length = 157

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/125 (18%), Positives = 46/125 (36%), Gaps = 7/125 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      +++M     +  +     +  A  ++     G + V D   +L G++T+ DI 
Sbjct: 12  GEPMHRVNEIM--SQDVVRIAPTDSIRHAAQLMERYDVGALPVCD-NNRLVGMVTDRDIA 68

Query: 274 -RNFHKDLN-TLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R           V +V    P     +D  L      +    +  L VVD  ++ +G++
Sbjct: 69  VRAISAGKPPETRVHEVAS-GPIEWCFDDDSLEEIQHYMADAQLRRLPVVDHDKRLVGML 127

Query: 331 HFLDL 335
              D+
Sbjct: 128 SLADI 132



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R   +      V ++M ++   I     +  A QL+ ++++  L V D+  + +G+V  
Sbjct: 6   RRIQPQGEPMHRVNEIMSQDVVRIAPTDSIRHAAQLMERYDVGALPVCDN-NRLVGMVTD 64

Query: 333 LDL 335
            D+
Sbjct: 65  RDI 67


>gi|148256526|ref|YP_001241111.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
 gi|146408699|gb|ABQ37205.1| hypothetical protein BBta_5213 [Bradyrhizobium sp. BTAi1]
          Length = 142

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    L DA  +L++++ G V V+  G +++GI++E DI R+  +    + T  V  VM
Sbjct: 17  VEPQTTLADAAKLLADRKIGAVLVM-SGSRMEGILSERDIVRSLGERGAAVLTEPVSGVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +          +   M+ +       L V+D     +G++   D++++ +
Sbjct: 76  TRRVVSCRPADTVASIMETMTTGKFRHLPVID-GGLVVGLISIGDVVKWRV 125


>gi|22125361|ref|NP_668784.1| transcriptional regulator [Yersinia pestis KIM 10]
 gi|45442417|ref|NP_993956.1| rpiR family transcriptional regulator [Yersinia pestis biovar
           Microtus str. 91001]
 gi|108808200|ref|YP_652116.1| rpiR family transcriptional regulator [Yersinia pestis Antiqua]
 gi|108811529|ref|YP_647296.1| transcriptional regulator [Yersinia pestis Nepal516]
 gi|145599400|ref|YP_001163476.1| transcriptional regulator [Yersinia pestis Pestoides F]
 gi|149365120|ref|ZP_01887155.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis CA88-4125]
 gi|162420441|ref|YP_001607161.1| RpiR family transcriptional regulator [Yersinia pestis Angola]
 gi|165926844|ref|ZP_02222676.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165935948|ref|ZP_02224518.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166011163|ref|ZP_02232061.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166212529|ref|ZP_02238564.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167398764|ref|ZP_02304288.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167422691|ref|ZP_02314444.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424657|ref|ZP_02316410.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|167467541|ref|ZP_02332245.1| transcriptional regulator, RpiR family protein [Yersinia pestis
           FV-1]
 gi|218930064|ref|YP_002347939.1| putative rpiR family transcriptional regulator [Yersinia pestis
           CO92]
 gi|229838610|ref|ZP_04458769.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229895678|ref|ZP_04510849.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Pestoides A]
 gi|229899176|ref|ZP_04514319.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229901796|ref|ZP_04516918.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Nepal516]
 gi|270489985|ref|ZP_06207059.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
 gi|294504768|ref|YP_003568830.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Z176003]
 gi|21958243|gb|AAM85035.1|AE013749_8 putative transcriptional regulator [Yersinia pestis KIM 10]
 gi|45437282|gb|AAS62833.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Microtus str. 91001]
 gi|108775177|gb|ABG17696.1| rpiR-family transcriptional regulatory protein [Yersinia pestis
           Nepal516]
 gi|108780113|gb|ABG14171.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Antiqua]
 gi|115348675|emb|CAL21620.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis CO92]
 gi|145211096|gb|ABP40503.1| rpiR-family transcriptional regulatory protein [Yersinia pestis
           Pestoides F]
 gi|149291533|gb|EDM41607.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis CA88-4125]
 gi|162353256|gb|ABX87204.1| transcriptional regulator, RpiR family [Yersinia pestis Angola]
 gi|165916093|gb|EDR34700.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165921195|gb|EDR38419.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165989841|gb|EDR42142.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166206460|gb|EDR50940.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166958398|gb|EDR55419.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167051268|gb|EDR62676.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167056539|gb|EDR66308.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|229681725|gb|EEO77819.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Nepal516]
 gi|229687578|gb|EEO79651.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. India 195]
 gi|229694976|gb|EEO85023.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Orientalis str. PEXU2]
 gi|229701484|gb|EEO89512.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Pestoides A]
 gi|262366754|gb|ACY63311.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis D182038]
 gi|270338489|gb|EFA49266.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
 gi|294355227|gb|ADE65568.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis Z176003]
 gi|320014425|gb|ADV97996.1| putative rpiR-family transcriptional regulatory protein [Yersinia
           pestis biovar Medievalis str. Harbin 35]
          Length = 292

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/175 (22%), Positives = 66/175 (37%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +Q A+ ++++E   L S+ES  Q          V K+     R+ I G+G SG     
Sbjct: 110 SKLQSAINNVLSETLNLLSIESVEQ----------VVKVLRPADRICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A+      
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSGTSAETVQALKLAKEAGATT 219

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 220 VALTHNMGSRITELADYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYALLVKA 272


>gi|78060130|ref|YP_366705.1| CBS domain-containing protein [Burkholderia sp. 383]
 gi|77964680|gb|ABB06061.1| CBS domain containing membrane protein [Burkholderia sp. 383]
          Length = 143

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 42/113 (37%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAQLMERYDVGALPVCD-NNRLVGMVTDRDLAVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +++V    P     ED  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RIQEVAS-GPIEWCFEDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   I     +  A QL+ ++++  L V D+  + +G+V   DL
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAQLMERYDVGALPVCDN-NRLVGMVTDRDL 53


>gi|172058229|ref|YP_001814689.1| signal-transduction protein [Exiguobacterium sibiricum 255-15]
 gi|171990750|gb|ACB61672.1| putative signal-transduction protein with CBS and DRTGG domains
           [Exiguobacterium sibiricum 255-15]
          Length = 436

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 54/126 (42%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +  SD++        ++   P+     +  + +     V+DE  K+ G++T  DI
Sbjct: 184 IKKEILLVSDILIPLHDTFYLQTNDPISRWHELNEQTKHNRYPVIDEQMKVVGVVTAKDI 243

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   +   VE VM ++P  +   T +T +   +    I +L V+D   + +GI+  
Sbjct: 244 I----DRPHDWPVEKVMTRHPITVGIRTSVTNSAHQMVWEGIEMLPVIDQYGRLLGIISR 299

Query: 333 LDLLRF 338
            D+L+ 
Sbjct: 300 QDVLKA 305


>gi|145592301|ref|YP_001154303.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145284069|gb|ABP51651.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 138

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
                + +  T L++ R G   +       K   +++E DI +   + L+       +  
Sbjct: 16  PETATIREVATELAKNRVGLAVLTARNNPKKPVAVVSERDILKAVAQRLDLDGPATSIAN 75

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +P  +++   + VA + +RQHNI  ++VV+   + +G++   D+
Sbjct: 76  -SPITVMDTDPVRVAAEKMRQHNIRHVVVVNKNGELVGVLSIRDI 119



 Score = 36.4 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 41/117 (35%), Gaps = 5/117 (4%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG---GKLGTLFVCASDVMHSGDSI 230
             T   +      + + +A+L +RN  +    V+        +              +S 
Sbjct: 18  TATIREVATELAKNRVGLAVLTARNNPKKPVAVVSERDILKAVAQRLDLDGPATSIANSP 77

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSV 285
             V    P+  A   + +     V VV++  +L G+++  DI   R    +L +  V
Sbjct: 78  ITVMDTDPVRVAAEKMRQHNIRHVVVVNKNGELVGVLSIRDICFERAILMELASTEV 134


>gi|18977976|ref|NP_579333.1| hypothetical protein PF1604 [Pyrococcus furiosus DSM 3638]
 gi|18893752|gb|AAL81728.1| hypothetical protein PF1604 [Pyrococcus furiosus DSM 3638]
          Length = 159

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 54/139 (38%), Gaps = 20/139 (14%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEG 270
                +  + +      +P+V+   P+ID + +L  +    V VV+     KL GII   
Sbjct: 8   NAFHSMKVNQLTPPCSQMPIVEEDSPIIDVLKLLRTRHH--VWVVNNRKDMKLVGIIRYL 65

Query: 271 DIFRNFHKDLNTL----------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           DI   F                          D+M +N   I ED  +  A++ ++++ I
Sbjct: 66  DIIDIFLPPKGARLGAVSSVFKSILSGAEKAGDIMERNFLTINEDATVLEALEKMKRYKI 125

Query: 315 SVLMVVDDCQKAIGIVHFL 333
            +L ++D+  K  G +   
Sbjct: 126 QILALIDEEGKLKGEISLR 144


>gi|20093429|ref|NP_619504.1| hypothetical protein MA4650 [Methanosarcina acetivorans C2A]
 gi|19918803|gb|AAM07984.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 281

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 56/121 (46%), Gaps = 11/121 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +  + I  P+  A  ++   R   + V++E  K+ GI+T+ DI             
Sbjct: 7   MSSPVYAINIDEPVSRARKLMLRHRISTLLVLNE-GKMVGIVTKSDISNRLAQAEPLWRR 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + ++ +M ++   I  +  ++ A  L+ ++ +  + VV +    +GIV   D++R
Sbjct: 66  RPIDQIPIKLLMTESVITIYPEASISQAAALMLENGVHDIPVVKND--IVGIVTRTDIVR 123

Query: 338 F 338
           +
Sbjct: 124 Y 124



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 46/112 (41%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
             +S+  +     +  A  ++ E     + VV     + GI+T  DI R    H D    
Sbjct: 77  MTESVITIYPEASISQAAALMLENGVHDIPVV--KNDIVGIVTRTDIVRYVAEHADEIDT 134

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +  +M  +   +     +   ++ + ++ I  ++V DD  K +G++   +L
Sbjct: 135 KISTLMTDDIVSVHRHHTINHVIEEMNKNEIERVIVKDDAGKPVGVISKRNL 186



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/133 (18%), Positives = 50/133 (37%), Gaps = 29/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           V     +   I  +++     V V D+  K  G+I++ ++  N   D             
Sbjct: 147 VHRHHTINHVIEEMNKNEIERVIVKDDAGKPVGVISKRNLALNLLTDNEGKLSTKSIKMA 206

Query: 283 ------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                             L+ ED+MI     I  +  +++A + L +  I+ L V D  +
Sbjct: 207 RKSSPGGQKTYRYVKEVPLTAEDIMITPIISIDVNEKISIAAKKLIEEEITALPVSDGEE 266

Query: 325 KAIGIVHFLDLLR 337
             +GI+   D+++
Sbjct: 267 -IVGILSRTDIMK 278



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M      I  D  ++ A +L+ +H IS L+V+++  K +GIV   D+
Sbjct: 3   VADIMSSPVYAINIDEPVSRARKLMLRHRISTLLVLNE-GKMVGIVTKSDI 52


>gi|47093771|ref|ZP_00231520.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 4b H7858]
 gi|254931602|ref|ZP_05264961.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes HPB2262]
 gi|47017858|gb|EAL08642.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes str. 4b H7858]
 gi|293583155|gb|EFF95187.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes HPB2262]
 gi|328465025|gb|EGF36304.1| hypothetical protein LM1816_09692 [Listeria monocytogenes 1816]
 gi|328474000|gb|EGF44813.1| hypothetical protein LM220_15795 [Listeria monocytogenes 220]
 gi|332312101|gb|EGJ25196.1| Phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes str. Scott A]
          Length = 283

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 2/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++  +       +   A E +      +   G+G S  +   ++      G       
Sbjct: 106 IQTMNDTASQLDEAKVLEACELLGEADT-IYTYGVGASWLVAEDISQKWLRAGKHVLATQ 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A           +  + I +S SG + E+  ++  A+  ++ +I++T    + +   AD
Sbjct: 165 DAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVIVISLTRFGSNKLKEKAD 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           + L   + PE+     A T+S   QL + D L
Sbjct: 225 LSLETSRAPEAEIRSTA-TSSRQAQLLVIDIL 255


>gi|254419222|ref|ZP_05032946.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
 gi|196185399|gb|EDX80375.1| hypothetical protein BBAL3_1532 [Brevundimonas sp. BAL3]
          Length = 142

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---SVEDVM 289
           +     +  A   L  KR G + VV +G+ + G+ +E D+ +    D        V D M
Sbjct: 17  IASDLTVAQACGELERKRVGAL-VVRDGESVAGVFSERDVVKALAVDGPNALGRPVSDYM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                       L+  M  +    I  L V+ +  + +G++   D+++
Sbjct: 76  SARVIFAEPGETLSAVMGRMTDRRIRHLPVLSE-GRLVGVISIGDVVK 122


>gi|149194548|ref|ZP_01871644.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Caminibacter
           mediatlanticus TB-2]
 gi|149135292|gb|EDM23772.1| cyclic nucleotide-binding domain (cNMP-BD) protein [Caminibacter
           mediatlanticus TB-2]
          Length = 582

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/149 (23%), Positives = 59/149 (39%), Gaps = 17/149 (11%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           +A  +   R  ++N F           +                V+    + DA+    E
Sbjct: 111 IATKIQNLRKRNQNQFSSFLSAKVNDLIIHEV----------TFVEKNNSIKDAVIK-KE 159

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQ 307
                  +VD       I+T+ ++ +    D++   S+E +  KN   I E+  L  A+ 
Sbjct: 160 NENTSAIIVDSN----SIVTDSNLKKIILNDISIDDSIEKIATKNLITIDEEDFLFNALL 215

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+ +HNI  L VV    K IGI+  +DLL
Sbjct: 216 LMTKHNIKRL-VVKSKNKIIGIIEQIDLL 243


>gi|15890679|ref|NP_356351.1| hypothetical protein Atu4303 [Agrobacterium tumefaciens str. C58]
 gi|15158945|gb|AAK89136.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 143

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 49/113 (43%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            +   + ++ +   L  A   LS    G   V  +G K  G++++ D+ R+        S
Sbjct: 9   MTSARLMMIDVAATLQVAALTLSNPGIGLAVVRGQGGKAAGVLSKSDLIRHMTDGEQEAS 68

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VE +M +N         L  A Q++  + +  + V+D   + +G++   D L+
Sbjct: 69  VESLMSRNIVSCSPADELQTAWQVMVDNRVQNMPVLDADARPLGVLDIRDALK 121


>gi|94310080|ref|YP_583290.1| signal-transduction protein [Cupriavidus metallidurans CH34]
 gi|93353932|gb|ABF08021.1| conserved hypothetical protein [Cupriavidus metallidurans CH34]
          Length = 151

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL+ A+  ++E   G + VV E   L G++T  +I      +   L T S+  VM
Sbjct: 17  VTPDTPLMQAVQAMAEHDIGSL-VVMEYGDLVGMLTFREIIETMAANNGTLGTHSIRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   L V+D+ +  +G++ F D+ +
Sbjct: 76  DDAPLTCTPETDVNEVRRMMLERHTRYLPVLDN-RTLMGVISFYDVAK 122



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 25/42 (59%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+Q + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTPLMQAVQAMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|330824737|ref|YP_004388040.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus
           denitrificans K601]
 gi|329310109|gb|AEB84524.1| inosine-5'-monophosphate dehydrogenase [Alicycliphilus
           denitrificans K601]
          Length = 491

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 63/169 (37%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAQQQAAEVSRVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +          V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLELSENLGISGFPVCD-GGKVVGIVTSRDVRFETRYDV---KVSQIMT 152

Query: 291 KNPKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              K+I     + T    A  LL +H +  L+VV+D  +  G++   D+
Sbjct: 153 PREKLITVNEKDHTSPAQAKALLNKHKLERLLVVNDGFELKGLITVKDI 201


>gi|256004003|ref|ZP_05428989.1| IMP dehydrogenase [Clostridium thermocellum DSM 2360]
 gi|255992131|gb|EEU02227.1| IMP dehydrogenase [Clostridium thermocellum DSM 2360]
          Length = 497

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/160 (23%), Positives = 59/160 (36%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ    D LAIAL      S    Y   P      +                
Sbjct: 51  NIPIVSAIMQSVSNDTLAIALARCGGLSF--IYASQPIESQAEMVKRVKKYKSGFVVSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            + I   L D I + +      +A+ D+G    KL G++T  D      ++     V+D 
Sbjct: 109 NLTIDSTLKDVIELKNRTGHSTIAITDDGTASGKLLGLVTTRDYR--ISRNPLDKKVKDF 166

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           M       V      L+ A  ++ ++ ++ L +VDD Q+ 
Sbjct: 167 MTPFSKLVVGKLGISLSEANDIIWENKLNCLPIVDDEQRL 206


>gi|148643113|ref|YP_001273626.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
 gi|148552130|gb|ABQ87258.1| IMP dehydrogenase related protein [Methanobrevibacter smithii ATCC
           35061]
          Length = 272

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           V     L D   ++ E   G V +V +   + GI+++ D       +  + ++V++VM  
Sbjct: 87  VVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADFVTLAVGRAFDKITVKEVMSD 146

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + K +     L  A +++   ++  L V+D  +  +G++   D+++ 
Sbjct: 147 DIKAVSSQERLVHARRIMIDSHVGRLPVIDGDE-LVGMMTSKDVMKA 192



 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 14/139 (10%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G  F   +      D I  V     L+ A  I+ +   G + V+D G +L G++T  D
Sbjct: 130 AVGRAFDKITVKEVMSDDIKAVSSQERLVHARRIMIDSHVGRLPVID-GDELVGMMTSKD 188

Query: 272 IFRNFHKDLNTLS------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + + F      +             VE+VM  NP  I ++  ++     +     + L V
Sbjct: 189 VMKAFINFRKNVPEKYQKTQIKEILVEEVMSDNPLSISKNASISEVANTMMDTGYNGLPV 248

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V+D    IGI+   D+LR 
Sbjct: 249 VEDNN-VIGIITQTDILRL 266



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFRNF----- 276
             + +  V     L D + +L++     + V+    D  ++L GII+E D+         
Sbjct: 7   MSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERDVADKLGSSKY 66

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + L +  VM+K+   ++E   L     L+ ++ I  + +V D    +GIV   D 
Sbjct: 67  ENMPASRLHISSVMVKDVISVVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADF 126

Query: 336 LRFGI 340
           +   +
Sbjct: 127 VTLAV 131



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLD 334
           + ++++M ++   + +D  L+  ++LL ++++S L V+    D  ++ +GI+   D
Sbjct: 1   MQIKNLMSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERD 56



 Score = 39.9 bits (92), Expect = 0.62,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F    P     T            D+   +     + +    + +  +  + VV++   
Sbjct: 195 NFRKNVPEKYQKTQIKEILVEEVMSDNPLSISKNASISEVANTMMDTGYNGLPVVEDNN- 253

Query: 263 LKGIITEGDIFRNFHK 278
           + GIIT+ DI R   K
Sbjct: 254 VIGIITQTDILRLIAK 269


>gi|39996900|ref|NP_952851.1| CBS domain-containing protein [Geobacter sulfurreducens PCA]
 gi|39983788|gb|AAR35178.1| CBS domain protein [Geobacter sulfurreducens PCA]
 gi|298505913|gb|ADI84636.1| CBS domain pair-containing protein [Geobacter sulfurreducens KN400]
          Length = 149

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/131 (19%), Positives = 53/131 (40%), Gaps = 28/131 (21%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------------- 272
           +    + +   + S+ R G + VVDE   L GI+TE D+                     
Sbjct: 16  RRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLIEQDKSLHIPTVISLFDWVIY 75

Query: 273 ---FRNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
               + F +++      +  D+     + +  +T ++    ++    +  L VV + +K 
Sbjct: 76  LESAKKFEREIQKVTGQTAGDIYTTEVESVTPETPVSTVADIMANKKLHTLPVV-EGKKL 134

Query: 327 IGIVHFLDLLR 337
           +GIV  +DL+R
Sbjct: 135 VGIVSRIDLIR 145



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V D+M  N      +T +    +L  ++ I  + VVD+     GIV   DL+
Sbjct: 2   KTVRDIMTTNVVTARRETTIRELAELFSKYRIGSIPVVDEAGNLAGIVTESDLI 55



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    P+     I++ K+   + VV EG+KL GI++  D+ R  
Sbjct: 105 VTPETPVSTVADIMANKKLHTLPVV-EGKKLVGIVSRIDLIRTM 147


>gi|325689812|gb|EGD31816.1| CBS domain protein [Streptococcus sanguinis SK115]
          Length = 209

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDKNNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|227509729|ref|ZP_03939778.1| transcriptional regulator [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
 gi|227190653|gb|EEI70720.1| transcriptional regulator [Lactobacillus brevis subsp. gravesensis
           ATCC 27305]
          Length = 228

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 6/129 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   L    +  + +         +     L +A+  L  +  G + VVDE   L G+I+
Sbjct: 84  PDKVLNYQQLFETSISEILQKPTKIMEAATLTEAVNTLFIEDVGSLYVVDEHLHLVGLIS 143

Query: 269 EGDIFRNFHKDLNT--LSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVD--D 322
             D+ R    + N        VM + P    +  D  +  A QLL    +  L VVD  D
Sbjct: 144 RKDLLRATLNNTNASLTLASTVMTRMPNIFTVTPDMPIIKAGQLLLDRKVDSLPVVDQND 203

Query: 323 CQKAIGIVH 331
            QK IG + 
Sbjct: 204 HQKVIGKIT 212



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L   S+ +++ K P  I+E   LT A+  L   ++  L VVD+    +G++   DLLR
Sbjct: 91  QQLFETSISEILQK-PTKIMEAATLTEAVNTLFIEDVGSLYVVDEHLHLVGLISRKDLLR 149

Query: 338 F 338
            
Sbjct: 150 A 150


>gi|227523639|ref|ZP_03953688.1| acetoin utilization probable/CBS domain protein [Lactobacillus
           hilgardii ATCC 8290]
 gi|227089211|gb|EEI24523.1| acetoin utilization probable/CBS domain protein [Lactobacillus
           hilgardii ATCC 8290]
          Length = 216

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 54/125 (43%), Gaps = 14/125 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---------- 275
              ++  V     +  A+ ++       + V+D    L G+IT G I             
Sbjct: 7   MSTNVITVPPETKISVAVNLMKSNNIHRLPVID-NGHLVGLITAGIIQAASPSQATSLSI 65

Query: 276 --FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             ++  LN ++V+++M    + I  D  L  A+  + ++ + VL V+ + +  IGI+   
Sbjct: 66  YEYNYLLNKMTVKEIMETTVRTIGADDFLEDAIYKMLKYQVGVLPVISNNET-IGIITNN 124

Query: 334 DLLRF 338
           D+L+ 
Sbjct: 125 DILKA 129



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 7/59 (11%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +SV D M  N   +  +T ++VA+ L++ +NI  L V+D+    +G++        GII
Sbjct: 1   MSVRDFMSTNVITVPPETKISVAVNLMKSNNIHRLPVIDN-GHLVGLIT------AGII 52



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 21/99 (21%), Positives = 41/99 (41%), Gaps = 8/99 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  +     L DAI  + + + G + V+   + + GIIT  DI + F   L+    
Sbjct: 81  METTVRTIGADDFLEDAIYKMLKYQVGVLPVISNNETI-GIITNNDILKAF---LDVTDY 136

Query: 286 EDVMIKNPKVILEDTL--LTVAMQLLRQH--NISVLMVV 320
           ++        I +D    +    +++  +  NI  LMV 
Sbjct: 137 KESATVVQVFIHQDRTGVIYEIGKIMADNNLNIQTLMVT 175


>gi|91227219|ref|ZP_01261678.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
 gi|91188747|gb|EAS75035.1| hypothetical protein V12G01_16532 [Vibrio alginolyticus 12G01]
          Length = 629

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---------LKGIITEGDI-FRNFHKDL 280
             +  G  +  A   ++      + +VD             + GIIT+ D+  R   + L
Sbjct: 161 HTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 221 SPQDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 278


>gi|46907890|ref|YP_014279.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|226224262|ref|YP_002758369.1| hypothetical protein Lm4b_01672 [Listeria monocytogenes Clip81459]
 gi|254824277|ref|ZP_05229278.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J1-194]
 gi|254852286|ref|ZP_05241634.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL R2-503]
 gi|254992977|ref|ZP_05275167.1| hypothetical protein LmonocytoFSL_07951 [Listeria monocytogenes FSL
           J2-064]
 gi|255522166|ref|ZP_05389403.1| hypothetical protein LmonocFSL_13270 [Listeria monocytogenes FSL
           J1-175]
 gi|300766056|ref|ZP_07076025.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes FSL N1-017]
 gi|46881159|gb|AAT04456.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|225876724|emb|CAS05433.1| Hypothetical protein of unknown function [Listeria monocytogenes
           serotype 4b str. CLIP 80459]
 gi|258605592|gb|EEW18200.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL R2-503]
 gi|293593512|gb|EFG01273.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL J1-194]
 gi|300513258|gb|EFK40336.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes FSL N1-017]
          Length = 283

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/152 (17%), Positives = 58/152 (38%), Gaps = 2/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++  +       +   A E +      +   G+G S  +   ++      G       
Sbjct: 106 IQTMNDTASQLDEAKVLEACELLGEADT-IYTYGVGASWLVAEDISQKWLRAGKHVLATQ 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A           +  + I +S SG + E+  ++  A+  ++ +I++T    + +   AD
Sbjct: 165 DAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVIVISLTRFGSNKLKEKAD 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           + L   + PE+     A T+S   QL + D L
Sbjct: 225 LSLETSRAPEAEIRSTA-TSSRQAQLLVIDIL 255


>gi|254228135|ref|ZP_04921564.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|262393912|ref|YP_003285766.1| Signal transduction protein [Vibrio sp. Ex25]
 gi|151939208|gb|EDN58037.1| putative nucleotidyltransferase family [Vibrio sp. Ex25]
 gi|262337506|gb|ACY51301.1| Signal transduction protein [Vibrio sp. Ex25]
          Length = 629

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---------LKGIITEGDI-FRNFHKDL 280
             +  G  +  A   ++      + +VD             + GIIT+ D+  R   + L
Sbjct: 161 HTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 221 SPQDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 278


>gi|153217377|ref|ZP_01951128.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 1587]
 gi|124113608|gb|EAY32428.1| inosine-5`-monophosphate dehydrogenase [Vibrio cholerae 1587]
          Length = 413

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 5/112 (4%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               V+    + D + +     F    VV E  +L GIIT  D+   F  DL T SV  V
Sbjct: 22  HPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRDVR--FVTDL-TKSVAAV 78

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E        + + +  +  ++VV+D  +  G++   D  + 
Sbjct: 79  MTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGMITAKDFHKA 130



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 19/44 (43%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +P  +  +  +   M+L   H  +   VV +  + +GI+   D
Sbjct: 21  THPVTVRPEQTIADVMELTHYHGFAGFPVVTENNELVGIITGRD 64


>gi|110669057|ref|YP_658868.1| CBS domain-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109626804|emb|CAJ53272.1| CBS domain protein [Haloquadratum walsbyi DSM 16790]
          Length = 382

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 39/148 (26%), Positives = 63/148 (42%), Gaps = 12/148 (8%)

Query: 200 SENDFYVLHPGGKLGT--LFVCASDVMHSGDSIPLVKIGCP-------LIDAITILSEKR 250
             N   V   GG  G           M     + +V    P       + +A  +L E  
Sbjct: 31  RPNGIIVTKEGGYNGVVGEKQLVRSRMGDDTKVDVVTKSAPKLDRHEDIREAARMLVEGD 90

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                V  EG +L GI+T  DI +   ++L+ +SVED+   +   + E + L  A+  LR
Sbjct: 91  VNVAPVF-EGNQLYGIVTGEDILQAVLENLDAISVEDIFTDDVVDVAEQSPLGEAINKLR 149

Query: 311 QHNISVLMVV--DDCQKAIGIVHFLDLL 336
           +H+IS + VV  D+     GI+   D++
Sbjct: 150 EHSISRVPVVEQDESSSLTGILTTHDII 177



 Score = 61.8 bits (149), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 49/125 (39%), Gaps = 19/125 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV--DEGQKLKGIITEGDIFRNFHKD----------- 279
           V    PL +AI  L E     V VV  DE   L GI+T  DI     +D           
Sbjct: 135 VAEQSPLGEAINKLREHSISRVPVVEQDESSSLTGILTTHDIIDFVVRDDDRQGRGDRSG 194

Query: 280 ----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFL 333
               +  L V D+M         +  ++ A++ +  ++IS ++V          G++   
Sbjct: 195 DLDRMLDLPVYDLMSAPVITAQPNEPVSDAVKRMFDNDISGVVVTPAAGDTTIEGVLTKT 254

Query: 334 DLLRF 338
           D+LR 
Sbjct: 255 DVLRA 259



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 38/84 (45%), Gaps = 4/84 (4%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
            +V +     G++ E  + R+   D   +   DV+ K+   +     +  A ++L + ++
Sbjct: 35  IIVTKEGGYNGVVGEKQLVRSRMGDDTKV---DVVTKSAPKLDRHEDIREAARMLVEGDV 91

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           +V  V  +  +  GIV   D+L+ 
Sbjct: 92  NVAPVF-EGNQLYGIVTGEDILQA 114


>gi|22297689|ref|NP_680936.1| putative chloride channel protein [Thermosynechococcus elongatus
           BP-1]
 gi|22293866|dbj|BAC07698.1| tll0145 [Thermosynechococcus elongatus BP-1]
          Length = 628

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 48/112 (42%), Gaps = 10/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--------LNTLSV 285
               P+++A   L EK+  C  V D  Q L G+IT GDI R   +           T +V
Sbjct: 477 SEATPVVEAGLQLIEKKVYCAFVTDSQQDLMGLITLGDISRVLTRWEADQETTAYPTQTV 536

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDL 335
             V  +N  +   D  L  A+  +   ++  L VVD     + +G++   ++
Sbjct: 537 GSVCTRNLLLAYSDEPLKDAIDRMAARDLRQLPVVDRNNPQRVLGLLTRENI 588



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 26/61 (42%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++L  LSV + M      + E T +  A   L +  +    V D  Q  +G++   D+ 
Sbjct: 457 EENLPNLSVAEAMQSPVLFLSEATPVVEAGLQLIEKKVYCAFVTDSQQDLMGLITLGDIS 516

Query: 337 R 337
           R
Sbjct: 517 R 517


>gi|59711271|ref|YP_204047.1| DNA-binding transcriptional repressor [Vibrio fischeri ES114]
 gi|59479372|gb|AAW85159.1| DNA-binding transcriptional repressor [Vibrio fischeri ES114]
          Length = 292

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 66/187 (35%), Gaps = 12/187 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VT + ++ +    +Q  + S++AE   L + +S              E +K  K  +  
Sbjct: 98  DVTAEDNAEVIGHKLQSTIESVLAETMNLLNFQS---------LESVAEALKDAKA-IYF 147

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG             G            +    ++   D  + LS SG+S E   
Sbjct: 148 FGVGSSGLTAESAKHKFMRIGLNVDAFTNNHFMYIKSSLMQPGDFAVGLSHSGNSVETTK 207

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            L  A+      IAIT   +S +  ++D VL                 + I QL + D +
Sbjct: 208 ALRLAKESGATTIAITHNPRSDITKYSDYVLVNGNRQGQLQGDSI--GTKISQLFVLDLI 265

Query: 190 AIALLES 196
              L++ 
Sbjct: 266 YTLLVKR 272


>gi|320159747|ref|YP_004172971.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
 gi|319993600|dbj|BAJ62371.1| hypothetical protein ANT_03370 [Anaerolinea thermophila UNI-1]
          Length = 427

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/142 (19%), Positives = 56/142 (39%), Gaps = 24/142 (16%)

Query: 220 ASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---- 273
           A  ++    +  +V       +  A   + E     + VVD  +++ GI+T  D+     
Sbjct: 119 AERLVREVMTRDVVHLMPEMNVRQAWQKMLESGVKAMPVVDSERRVVGILTSEDLLERGV 178

Query: 274 ---------RNFHKDLNT---------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
                    R    ++           L+V+DVM +      ED  L  A++ +    + 
Sbjct: 179 IRQRLSVAVRLDEAEIQEELRLLSASPLTVKDVMTQPVITAREDEHLGNAVRRMIDKGLK 238

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            + VV+   + +G++  LD+LR
Sbjct: 239 RMPVVNAGNQLVGMLSRLDILR 260



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 6/83 (7%)

Query: 265 GIITEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           G+IT  ++       R+ +       V +VM ++   ++ +  +  A Q + +  +  + 
Sbjct: 97  GMITLEEVRILKYTQRHLNPLPAERLVREVMTRDVVHLMPEMNVRQAWQKMLESGVKAMP 156

Query: 319 VVDDCQKAIGIVHFLDLLRFGII 341
           VVD  ++ +GI+   DLL  G+I
Sbjct: 157 VVDSERRVVGILTSEDLLERGVI 179



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 18/145 (12%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +        +VM +   +P++++   L   +   +      + VVDE  K  G+I++
Sbjct: 272 AAAVRGAVRTVGEVMRTD--LPVIRLTERLDTLLEKFAACDSNRLLVVDEQNKPVGVISD 329

Query: 270 GD----------------IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            D                + R        ++ ED+       +  D  +  A+Q +    
Sbjct: 330 SDVVVRVEAAQRKGILQALRRLTSPPPLKVTAEDLYSPGVLTVPTDAPIASAVQTMLAEG 389

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
             VL VVD     +GIV    LL  
Sbjct: 390 RKVLAVVDKQGTLLGIVDRQSLLEA 414


>gi|315303350|ref|ZP_07873971.1| conserved protein YtoI [Listeria ivanovii FSL F6-596]
 gi|313628281|gb|EFR96793.1| conserved protein YtoI [Listeria ivanovii FSL F6-596]
          Length = 242

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/90 (28%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
                   VV+   +L G++T  DI     K+  ++S+E VM KNP  +     +     
Sbjct: 24  STGHSRFPVVNRAMRLTGMVTSKDI---LEKN-PSISIERVMTKNPLTVGPKMSVASVAH 79

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++   +I V+ VV D    IGIV   D+L+
Sbjct: 80  MMIWESIEVIPVVKDDLSLIGIVSRQDILK 109


>gi|292655151|ref|YP_003535048.1| CBS/parB domain-containing protein [Haloferax volcanii DS2]
 gi|291372567|gb|ADE04794.1| CBS/parB domain protein [Haloferax volcanii DS2]
          Length = 260

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 4/122 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +   A+   +    +  V     + D    ++E        V +G+K +G +T  DI  +
Sbjct: 1   MTTKATVKEYMTREVQTVSPTDTVADVAQRIAESDGHNGFPVCDGRKAEGFVTARDILLS 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                +   +E VM  +  V   +  +  A +++ +  I  L VVDD    +GI+   D+
Sbjct: 61  ----ADDAPIETVMATDLVVAHPEMDVNDAARVILRSGIQKLPVVDDAGNLVGIISNTDV 116

Query: 336 LR 337
           +R
Sbjct: 117 IR 118



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/80 (16%), Positives = 29/80 (36%), Gaps = 4/80 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +      + DA  ++       + VVD+   L GII+  D+ R+  +      V
Sbjct: 70  MATDLVVAHPEMDVNDAARVILRSGIQKLPVVDDAGNLVGIISNTDVIRSQIERATPEKV 129

Query: 286 EDVMIK----NPKVILEDTL 301
             +M      +   + ++  
Sbjct: 130 GKLMRTLEQIHGITVHQERR 149


>gi|282860572|ref|ZP_06269638.1| transcriptional regulator, RpiR family [Streptomyces sp. ACTE]
 gi|282564308|gb|EFB69844.1| transcriptional regulator, RpiR family [Streptomyces sp. ACTE]
          Length = 305

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 151 RIDVYGVGASSLVGQDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRSGDVAIAITHSGSTG 210

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V  +AD +LT     ES     A  +S   QL +
Sbjct: 211 DVIEPLRVAFDRGATTIAITGRPDGPVTQYADHILTTSTARESE-LRPAAMSSRTSQLLV 269

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 270 VDCLFIGVAQR 280


>gi|266619839|ref|ZP_06112774.1| transcriptional regulator, RpiR family [Clostridium hathewayi DSM
           13479]
 gi|288868632|gb|EFD00931.1| transcriptional regulator, RpiR family [Clostridium hathewayi DSM
           13479]
          Length = 285

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 63/177 (35%), Gaps = 8/177 (4%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV-ITGIGKSGHIGS 80
           ST     +        L +    ++ E+       +E     + R++ + G+G S  +  
Sbjct: 96  STEDIIQKVTRKNIESLETSRKLVEPEIIDTCVKMIE-----ESRIIQLFGLGSSLLVAR 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L   L              A       + + DL IV+S+SG ++E+      A+     
Sbjct: 151 DLYLKLIRVEKLCNICDDWHAQLLAARTMRKGDLGIVISYSGLTEEMITCARAAKANGAR 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +I +T    S +A  AD VL                +S I QL + D L +A +   
Sbjct: 211 IIVLTRAADSKLAAEADCVL--AVAATELILRSGAMSSRISQLNMVDILYVAYVNKH 265


>gi|116495787|ref|YP_807521.1| CBS domain-containing protein [Lactobacillus casei ATCC 334]
 gi|227533651|ref|ZP_03963700.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|301067345|ref|YP_003789368.1| CBS domain-containing protein [Lactobacillus casei str. Zhang]
 gi|116105937|gb|ABJ71079.1| CBS domain containing protein [Lactobacillus casei ATCC 334]
 gi|227188635|gb|EEI68702.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|300439752|gb|ADK19518.1| CBS domain containing protein [Lactobacillus casei str. Zhang]
          Length = 207

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R  F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L VV +      IG + 
Sbjct: 150 MPNVITVTADTSIIAASKLLLKHNVDSLPVVQNAGDTHVIGKIT 193



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 87  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 132


>gi|303232927|ref|ZP_07319609.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
 gi|302480985|gb|EFL44063.1| SIS domain protein [Atopobium vaginae PB189-T1-4]
          Length = 284

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/202 (20%), Positives = 74/202 (36%), Gaps = 7/202 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAE--KRGLSSLESSLQGELSFQFHCAVEKI 60
           F      S      S +++   Q + + I+ +  +R + S+  + +   +  F   VE +
Sbjct: 72  FLLYELASTKLSTQSSIEDINPQDSTKQIMFKLMRRTIESITVTEKLNSAHTFDACVELM 131

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  +   GIG S      L   L                      +   D+ +  S+
Sbjct: 132 HNAR-VINAFGIGSSLLSAQDLQQKLLRVNIACSAYADWHMQLIAANNMQPGDVAVAFSY 190

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSV-VACHADIVLTLPKEPESCPHGLAPTTSA 179
           SG + E+   +  AR     +I IT    +  +A  AD+VL             +  TS 
Sbjct: 191 SGVTREVLRCVKTARERGGKVIGITRSASNRGLAREADVVL--YVAAIEPLLRSSAGTSR 248

Query: 180 IMQLAIGDALAIALLESRNFSE 201
           I QL + D L  AL+  ++F E
Sbjct: 249 ISQLMVVDMLFTALVN-KHFDE 269


>gi|291336740|gb|ADD96279.1| hypothetical protein [uncultured organism MedDCM-OCT-S08-C1481]
          Length = 83

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/61 (34%), Positives = 35/61 (57%)

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            F+HA EA HGD+G+I  +D+II  S SG ++E+  ++   +     +I+IT   K   +
Sbjct: 6   NFIHATEALHGDMGVINSNDIIIFYSNSGDTEEIVKLVPLLKVLKCKIISITGNKKYTAS 65

Query: 154 C 154
            
Sbjct: 66  K 66


>gi|206578526|ref|YP_002237759.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|288934617|ref|YP_003438676.1| RpiR family transcriptional regulator [Klebsiella variicola At-22]
 gi|290508818|ref|ZP_06548189.1| HTH-type transcriptional regulator hexR [Klebsiella sp. 1_1_55]
 gi|206567584|gb|ACI09360.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|288889326|gb|ADC57644.1| transcriptional regulator, RpiR family [Klebsiella variicola At-22]
 gi|289778212|gb|EFD86209.1| HTH-type transcriptional regulator hexR [Klebsiella sp. 1_1_55]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+           + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMASLDQVHHSLDMSAVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     +IA+TS   + +A  A
Sbjct: 161 DDIVLQRMSCMNCDDDDVVVIISHTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|168063807|ref|XP_001783860.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664638|gb|EDQ51350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 176

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 47/113 (41%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +      L +     +E     + VVD   +  G++++ D  R+   DL    V
Sbjct: 64  MSKLMYIAFPDQSLEEVDCHFAE--ISGLPVVDTDHRCVGVLSKTD--RSKASDL-KTKV 118

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++VM      +  D  ++ A  L+ +H I  + V++   + +GIV   D+   
Sbjct: 119 KEVMSSPAITLSADRTVSDAAVLMLKHKIHRIPVINSQAQVVGIVTRTDIFTA 171



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 9/47 (19%), Positives = 21/47 (44%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
                + DA  ++ + +   + V++   ++ GI+T  DIF      +
Sbjct: 130 SADRTVSDAAVLMLKHKIHRIPVINSQAQVVGIVTRTDIFTALEGGV 176


>gi|89071163|ref|ZP_01158356.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
 gi|89043289|gb|EAR49514.1| Protein containing a CBS domain [Oceanicola granulosus HTCC2516]
          Length = 144

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
            G  + +A+  LS+K+ G V + ++G+   GI++E DI R   +   +     V D+M  
Sbjct: 20  PGKSVAEAVAFLSDKKVGAVVISEDGRVPLGILSERDIVRELGRRGAECLQDGVHDMMTD 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                         ++++       L V+++ +  +G++   D+++  +
Sbjct: 80  KLTTCTPHDSADQVLEMMTTGRFRHLPVMENDEM-VGLISIGDVVKARL 127


>gi|54309595|ref|YP_130615.1| DNA-binding transcriptional regulator HexR [Photobacterium
           profundum SS9]
 gi|46914033|emb|CAG20813.1| putative transcriptional regulator [Photobacterium profundum SS9]
          Length = 284

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/147 (17%), Positives = 57/147 (38%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + +V+ +   K ++   G+G S  +     +       P             +   + 
Sbjct: 117 QINRSVDLLTQAK-KISFFGLGASASVAHDAQNKFFRFNIPIVCFDDIIMQRMSVINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D+++++S +G +  L  I   AR     +I IT++  S +     + + L    ++  +
Sbjct: 176 GDVVVMISHTGRTKSLVDIARIARENGATVIGITAK-DSPLDRECSLSICLDVPEDTDIY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|71065915|ref|YP_264642.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter arcticus
           273-4]
 gi|93005833|ref|YP_580270.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter
           cryohalolentis K5]
 gi|71038900|gb|AAZ19208.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter arcticus
           273-4]
 gi|92393511|gb|ABE74786.1| inosine-5'-monophosphate dehydrogenase [Psychrobacter
           cryohalolentis K5]
          Length = 490

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/173 (19%), Positives = 63/173 (36%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       +AI + +          +LH    +    +    V      +  
Sbjct: 41  NLPLISAAMDTVTESEMAITMAQLGGLG-----ILHKSMDIDKQAMQVRRVKKFEAGTVV 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVED 287
               V     + + + +  +     V VV++G  K+ GI+T  D    F  +L +L V  
Sbjct: 96  DPITVHPEMTIGELLRLTQDNNISGVPVVEKGTDKVVGIVTHRDWR--FETNL-SLPVSH 152

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M        + E        +LL +H I  ++V++D  +  G++   D  + 
Sbjct: 153 IMTPKEQLVTVKEGESNENIKRLLHEHRIEKVIVINDDFRLRGLITVNDFAKA 205


>gi|296133812|ref|YP_003641059.1| putative signal transduction protein with CBS domains [Thermincola
           sp. JR]
 gi|296032390|gb|ADG83158.1| putative signal transduction protein with CBS domains [Thermincola
           potens JR]
          Length = 147

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 52/128 (40%), Gaps = 24/128 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------------F 273
           K    + + I ++       + +VD+  K+ G++TEGDI                     
Sbjct: 15  KPENSIQELIRMMLNFNVSMLPIVDDNLKVLGVVTEGDIIYRAYSDGEPVDVGVAFLGKL 74

Query: 274 RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R   K +N     +  +VM +      EDT ++   +++ +  I  + ++    K +G+V
Sbjct: 75  REMIKSINKRSGTTAREVMTEELFTASEDTPISEIARMMVREKIKNVPIL-ADGKLVGLV 133

Query: 331 HFLDLLRF 338
              D++R 
Sbjct: 134 SRRDIMRL 141



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 28/52 (53%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++VM  N      +  +   ++++   N+S+L +VDD  K +G+V   D++
Sbjct: 3   AKEVMHTNVLTGKPENSIQELIRMMLNFNVSMLPIVDDNLKVLGVVTEGDII 54


>gi|262173711|ref|ZP_06041388.1| sialic acid utilization regulator RpiR family [Vibrio mimicus
           MB-451]
 gi|261891069|gb|EEY37056.1| sialic acid utilization regulator RpiR family [Vibrio mimicus
           MB-451]
          Length = 278

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 72  MALAVDLSQSANQSQPKMDGDICEISAQSAV----DSLMDTAKLIDR---ASLNRICELV 124

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  +   G+G S  +G  LA  L   G  +        +    G     D+   +S 
Sbjct: 125 HNAQ-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGRSVSGDVWFAISS 183

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  + +I++T+ + S ++  +D +L   +       G
Sbjct: 184 SGSTKEVVHAATQAHQRGVRVISLTNISHSPLSSISDEMLVAARPEGPLTGG 235


>gi|239943208|ref|ZP_04695145.1| RpiR family transcriptional regulator [Streptomyces roseosporus
           NRRL 15998]
 gi|239989665|ref|ZP_04710329.1| RpiR family transcriptional regulator [Streptomyces roseosporus
           NRRL 11379]
          Length = 301

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 147 RIDIYGVGASSLVGQDLAQKLLRIGLIAHAHMDPHLAVTNAVQLRSGDVAIAITHSGSTG 206

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V+ +AD VLT     ES     A  +S   QL +
Sbjct: 207 DVIEPLRVAFDHGATTIAITGRPDGPVSQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 265

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 266 VDCLFIGVAQR 276


>gi|84684721|ref|ZP_01012621.1| CBS domain-containing protein [Maritimibacter alkaliphilus
           HTCC2654]
 gi|84667056|gb|EAQ13526.1| CBS domain-containing protein [Rhodobacterales bacterium HTCC2654]
          Length = 144

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 48/111 (43%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           V     + DA  ILS ++ G V V ++G   +GI++E DI R          T  V  +M
Sbjct: 18  VTKDTSVADASAILSREKVGAVIVSEDGVHPQGIVSERDIVRELGARGTGCLTDPVSAIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +     +        +Q + +     + V+D  +  +G+V   D+++  +
Sbjct: 78  TEKLIGCVPGDRAIAVLQKMTEGRFRHMPVMDGDEM-VGLVSIGDVVKARL 127



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +DT +  A  +L +  +  ++V +D     GIV   D++R 
Sbjct: 17  TVTKDTSVADASAILSREKVGAVIVSEDGVHPQGIVSERDIVRE 60


>gi|269967100|ref|ZP_06181168.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
 gi|269828359|gb|EEZ82625.1| conserved hypothetical protein [Vibrio alginolyticus 40B]
          Length = 629

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 48/119 (40%), Gaps = 12/119 (10%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---------LKGIITEGDI-FRNFHKDL 280
             +  G  +  A   ++      + +VD             + GIIT+ D+  R   + L
Sbjct: 161 HTIDRGQTIQQAAQQMANDNVSALLIVDPDFVRDEDDPQSPVLGIITDRDLCTRVLAEGL 220

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + ++N+  L VV   Q  IGI+   D++R+
Sbjct: 221 SPQDDVSSVMTTEVMSLDHNAYIYEAMLTMLRYNVHHLPVV-KNQLPIGIIETTDIVRY 278


>gi|145591169|ref|YP_001153171.1| signal-transduction protein [Pyrobaculum arsenaticum DSM 13514]
 gi|145282937|gb|ABP50519.1| putative signal-transduction protein with CBS domains [Pyrobaculum
           arsenaticum DSM 13514]
          Length = 135

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 20/117 (17%), Positives = 52/117 (44%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIFRNFH-KDLNT 282
                  V     L +A  +L++   G + VV+     +  G+++E D+ R    K   T
Sbjct: 14  MSHPPITVTPDKTLEEATELLAKHDIGLLVVVERDNPRRPIGVLSERDVVRAIAWKAPLT 73

Query: 283 LSVEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V +         +  D  +  A++ + ++ +  ++V++     +G++   DL+++
Sbjct: 74  VTVREAGTFSGLLYVYADDPVEKALETMLKYGVRHVLVLEQNGDLLGVISMRDLVKY 130



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLRF 338
           +   DVM   P  +  D  L  A +LL +H+I +L+VV  D+ ++ IG++   D++R 
Sbjct: 8   MKCRDVMSHPPITVTPDKTLEEATELLAKHDIGLLVVVERDNPRRPIGVLSERDVVRA 65


>gi|126700864|ref|YP_001089761.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           630]
 gi|254976842|ref|ZP_05273314.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-66c26]
 gi|255094229|ref|ZP_05323707.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           CIP 107932]
 gi|255102392|ref|ZP_05331369.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-63q42]
 gi|255308292|ref|ZP_05352463.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           ATCC 43255]
 gi|255315982|ref|ZP_05357565.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-76w55]
 gi|255518639|ref|ZP_05386315.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-97b34]
 gi|255651761|ref|ZP_05398663.1| sigma-54-dependent transcriptional activator [Clostridium difficile
           QCD-37x79]
 gi|115252301|emb|CAJ70142.1| Transcriptional regulator, sigma-54-dependent [Clostridium
           difficile]
          Length = 586

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
                  +     + DAI  + +     + V+D   +LKGII+  DI      HK     
Sbjct: 14  MDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSDQLKGIISMTDIHNLYEMHKKYEGQ 73

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLL 336
            V+ +M K+   + E   L     ++   NI +L V+    K IG++   H  D L
Sbjct: 74  PVKLIMKKDVIYVNEGLTLDECRDIMILKNIGILPVL-RDNKIIGVLKQEHIRDYL 128



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VE+VM      I EDT +  A++ + + N   LMV+D   +  GI+   D+ 
Sbjct: 8   KKVEEVMDTKFTTIDEDTRIEDAIKEMIKSNTKTLMVIDSSDQLKGIISMTDIH 61


>gi|238792592|ref|ZP_04636225.1| Hex regulon repressor [Yersinia intermedia ATCC 29909]
 gi|238728227|gb|EEQ19748.1| Hex regulon repressor [Yersinia intermedia ATCC 29909]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 64/166 (38%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ +         + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 103 MASLDMAKNNLDIPAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 162 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARENDATVIAITSR-DTPLASEAT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 221 LSLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|291446682|ref|ZP_06586072.1| RpiR-family transcriptional regulator [Streptomyces roseosporus
           NRRL 15998]
 gi|291349629|gb|EFE76533.1| RpiR-family transcriptional regulator [Streptomyces roseosporus
           NRRL 15998]
          Length = 305

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 151 RIDIYGVGASSLVGQDLAQKLLRIGLIAHAHMDPHLAVTNAVQLRSGDVAIAITHSGSTG 210

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V+ +AD VLT     ES     A  +S   QL +
Sbjct: 211 DVIEPLRVAFDHGATTIAITGRPDGPVSQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 269

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 270 VDCLFIGVAQR 280


>gi|1074280|pir||G64143 hypothetical protein HI0143 - Haemophilus influenzae (strain Rd
           KW20)
          Length = 299

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 16/196 (8%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 103 EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 152

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 153 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 212

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 213 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 270

Query: 190 AIALLESRNFSENDFY 205
              L++     E D  
Sbjct: 271 YALLVQ----GEEDIA 282


>gi|26248119|ref|NP_754159.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           CFT073]
 gi|91211078|ref|YP_541064.1| DNA-binding transcriptional regulator HexR [Escherichia coli UTI89]
 gi|110641971|ref|YP_669701.1| DNA-binding transcriptional regulator HexR [Escherichia coli 536]
 gi|117624005|ref|YP_852918.1| DNA-binding transcriptional regulator HexR [Escherichia coli APEC
           O1]
 gi|191172993|ref|ZP_03034527.1| transcriptional regulator, rpiR family [Escherichia coli F11]
 gi|215487066|ref|YP_002329497.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218558718|ref|YP_002391631.1| HexR family transcriptional regulator [Escherichia coli S88]
 gi|218689791|ref|YP_002398003.1| DNA-binding transcriptional regulator HexR [Escherichia coli ED1a]
 gi|227885719|ref|ZP_04003524.1| DNA-binding transcriptional regulator HexR [Escherichia coli 83972]
 gi|237705807|ref|ZP_04536288.1| hex regulon repressor [Escherichia sp. 3_2_53FAA]
 gi|300935827|ref|ZP_07150786.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|300982127|ref|ZP_07175892.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|300994118|ref|ZP_07180701.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|301050794|ref|ZP_07197650.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|306814317|ref|ZP_07448483.1| DNA-binding transcriptional regulator HexR [Escherichia coli NC101]
 gi|312967055|ref|ZP_07781273.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|331647450|ref|ZP_08348542.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli M605]
 gi|26108522|gb|AAN80724.1|AE016761_299 Hex regulon repressor [Escherichia coli CFT073]
 gi|91072652|gb|ABE07533.1| Hex regulon repressor [Escherichia coli UTI89]
 gi|110343563|gb|ABG69800.1| hex regulon repressor [Escherichia coli 536]
 gi|115513129|gb|ABJ01204.1| hex regulon repressor [Escherichia coli APEC O1]
 gi|190906704|gb|EDV66309.1| transcriptional regulator, rpiR family [Escherichia coli F11]
 gi|215265138|emb|CAS09526.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O127:H6 str. E2348/69]
 gi|218365487|emb|CAR03214.1| putative DNA-binding transcriptional regulator [Escherichia coli
           S88]
 gi|218427355|emb|CAR08250.2| putative DNA-binding transcriptional regulator [Escherichia coli
           ED1a]
 gi|222033602|emb|CAP76343.1| HTH-type transcriptional regulator hexR [Escherichia coli LF82]
 gi|226900564|gb|EEH86823.1| hex regulon repressor [Escherichia sp. 3_2_53FAA]
 gi|227837292|gb|EEJ47758.1| DNA-binding transcriptional regulator HexR [Escherichia coli 83972]
 gi|281178921|dbj|BAI55251.1| putative transcriptional regulator [Escherichia coli SE15]
 gi|294492180|gb|ADE90936.1| transcriptional regulator, rpiR family [Escherichia coli IHE3034]
 gi|300297527|gb|EFJ53912.1| transcriptional regulator, RpiR family [Escherichia coli MS 185-1]
 gi|300307334|gb|EFJ61854.1| transcriptional regulator, RpiR family [Escherichia coli MS 200-1]
 gi|300406380|gb|EFJ89918.1| transcriptional regulator, RpiR family [Escherichia coli MS 45-1]
 gi|300459000|gb|EFK22493.1| transcriptional regulator, RpiR family [Escherichia coli MS 21-1]
 gi|305852476|gb|EFM52927.1| DNA-binding transcriptional regulator HexR [Escherichia coli NC101]
 gi|307553872|gb|ADN46647.1| HTH-type transcriptional regulator HexR [Escherichia coli ABU
           83972]
 gi|307626664|gb|ADN70968.1| DNA-binding transcriptional regulator HexR [Escherichia coli UM146]
 gi|312288519|gb|EFR16421.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           2362-75]
 gi|312946453|gb|ADR27280.1| DNA-binding transcriptional regulator HexR [Escherichia coli O83:H1
           str. NRG 857C]
 gi|315286554|gb|EFU45989.1| transcriptional regulator, RpiR family [Escherichia coli MS 110-3]
 gi|315290353|gb|EFU49729.1| transcriptional regulator, RpiR family [Escherichia coli MS 153-1]
 gi|320194431|gb|EFW69062.1| Phosphogluconate repressor HexR, RpiR family [Escherichia coli
           WV_060327]
 gi|323952355|gb|EGB48228.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H252]
 gi|323956484|gb|EGB52226.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H263]
 gi|324007219|gb|EGB76438.1| transcriptional regulator, RpiR family [Escherichia coli MS 57-2]
 gi|324012857|gb|EGB82076.1| transcriptional regulator, RpiR family [Escherichia coli MS 60-1]
 gi|330911663|gb|EGH40173.1| phosphogluconate repressor HexR, RpiR family [Escherichia coli
           AA86]
 gi|331043174|gb|EGI15312.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli M605]
          Length = 289

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGTKFRD 264


>gi|262041970|ref|ZP_06015152.1| transcriptional regulator HexR [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|330001195|ref|ZP_08303917.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
 gi|259040668|gb|EEW41757.1| transcriptional regulator HexR [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|328537765|gb|EGF63966.1| transcriptional regulator, RpiR family [Klebsiella sp. MS 92-3]
          Length = 301

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+           + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 114 AMASLDQVHHSLDMSAVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS 172

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     +IA+TS   + +A  A
Sbjct: 173 DDIVLQRMSCMNCDDDDVVVIISHTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREA 231

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 232 TLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 276


>gi|257467290|ref|ZP_05631601.1| RpiR-family transcriptional regulator [Fusobacterium gonidiaformans
           ATCC 25563]
 gi|315918419|ref|ZP_07914659.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313692294|gb|EFS29129.1| conserved hypothetical protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 283

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 5/195 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K V+     +  N ++Q   + +  E   + ++E +       +   AV+ +   K +++
Sbjct: 81  KEVSIIDSEIDSNDSLQEVCQKVAREN--MRAIEDTYSLLDFKELEKAVKALGKAK-KIM 137

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G SG +   L+  L   G    F          L  +T  D++ V+S+SG + E+ 
Sbjct: 138 ILGAGFSGVVARDLSYKLLELGKDVVFESDFHMQFSLLTTMTSMDILFVISYSGKTKEVY 197

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            I   A+   I +I +T+   + +    DI L       +        +  I Q+ + D 
Sbjct: 198 EITKKAKERGIQIITLTTIAGNPIRDLGDITLNT--VELNKNFRATALSPRISQMTVIDM 255

Query: 189 LAIALLESRNFSEND 203
           L + L+      E +
Sbjct: 256 LYVKLILENKEMEEN 270


>gi|222445350|ref|ZP_03607865.1| hypothetical protein METSMIALI_00978 [Methanobrevibacter smithii
           DSM 2375]
 gi|222434915|gb|EEE42080.1| hypothetical protein METSMIALI_00978 [Methanobrevibacter smithii
           DSM 2375]
          Length = 272

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 50/107 (46%), Gaps = 2/107 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           V     L D   ++ E   G V +V +   + GI+++ D       +  + ++V++VM  
Sbjct: 87  VVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADFVTLAVGRAFDKITVKEVMSD 146

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + K +     L  A +++   ++  L V+D  +  +G++   D+++ 
Sbjct: 147 DIKAVSSQERLVHARRIMIDSHVGRLPVIDGDE-LVGMMTSKDVMKA 192



 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 14/139 (10%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +G  F   +      D I  V     L+ A  I+ +   G + V+D G +L G++T  D
Sbjct: 130 AVGRAFDKITVKEVMSDDIKAVSSQERLVHARRIMIDSHVGRLPVID-GDELVGMMTSKD 188

Query: 272 IFRNFHKDLNTLS------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           + + F      +             VE++M  NP  I +D  ++     +     + L V
Sbjct: 189 VMKAFINFRKNVPEKYQKTQIKEILVEEIMSDNPLSISKDASISEVANTMMDTGYNGLPV 248

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V+D    IGI+   D+LR 
Sbjct: 249 VEDNN-VIGIITQTDILRL 266



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 53/125 (42%), Gaps = 10/125 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIFRNF----- 276
             + +  V     L D + +L++     + V+    D  ++L GII+E D+         
Sbjct: 7   MSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERDVADKLGSSKY 66

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   + L +  VM+K+   ++E   L     L+ ++ I  + +V D    +GIV   D 
Sbjct: 67  ENMPASRLHISSVMVKDVISVVETMDLADVANLMLENGIGSVPIVSDDDMMVGIVSKADF 126

Query: 336 LRFGI 340
           +   +
Sbjct: 127 VTLAV 131



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 33/56 (58%), Gaps = 4/56 (7%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLD 334
           + ++++M ++   + +D  L+  ++LL ++++S L V+    D  ++ +GI+   D
Sbjct: 1   MQIKNLMSEDLITVDKDQKLSDGLKLLAKNDVSRLPVINTNKDHQRELVGIISERD 56



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 14/76 (18%), Positives = 27/76 (35%), Gaps = 1/76 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F    P     T            D+   +     + +    + +  +  + VV++   
Sbjct: 195 NFRKNVPEKYQKTQIKEILVEEIMSDNPLSISKDASISEVANTMMDTGYNGLPVVEDNN- 253

Query: 263 LKGIITEGDIFRNFHK 278
           + GIIT+ DI R   K
Sbjct: 254 VIGIITQTDILRLIAK 269


>gi|254459398|ref|ZP_05072819.1| ggef/eal/pas/pac-domain containing protein [Campylobacterales
           bacterium GD 1]
 gi|207084011|gb|EDZ61302.1| ggef/eal/pas/pac-domain containing protein [Campylobacterales
           bacterium GD 1]
          Length = 835

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 73/140 (52%), Gaps = 6/140 (4%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           SE DF  L   G +    + A + + +   + ++     ++D   ++SE R    A+V +
Sbjct: 117 SEGDF--LRHIGYIDVGALKAVEDIMNEAPL-MIDSNALIVDVAKMMSE-RHADTAIVMK 172

Query: 260 GQKLKGIITEGDIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
             K  G++ E D+ R + HKD +   +V+ ++ K+   +++   L  A Q++ +H I  L
Sbjct: 173 NLKAHGVVRERDVTRYYAHKDFSLDSTVKKIIQKDLHFVVKSIPLQKAAQMMEEHGIHQL 232

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
           +V D  +K IGI++  ++L+
Sbjct: 233 VVADSQEKIIGIINRHEVLK 252



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 1/123 (0%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +       +    SI  +     + DA+  +       + +VD   +  GI TE D  + 
Sbjct: 1   MKHTKIGSIIVSQSIASISPDKTIEDALNHMQSNAVSSIVIVDANNQPIGIFTEHDALKA 60

Query: 276 FHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               L   + + +V+  N  +I ED  +  A  +++      ++V ++  + +G+V   D
Sbjct: 61  IANSLQKSTLLSEVIAGNLFMIKEDIYMHDAYIMMQNKGYRHIIVTNENDEFVGVVSEGD 120

Query: 335 LLR 337
            LR
Sbjct: 121 FLR 123



 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 56/109 (51%), Gaps = 3/109 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLS-VEDVM 289
           ++K    + DA  ++  K +  + V +E  +  G+++EGD  R+    D+  L  VED+M
Sbjct: 81  MIKEDIYMHDAYIMMQNKGYRHIIVTNENDEFVGVVSEGDFLRHIGYIDVGALKAVEDIM 140

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + P +I  + L+    +++ + +    +V+    KA G+V   D+ R+
Sbjct: 141 NEAPLMIDSNALIVDVAKMMSERHADTAIVM-KNLKAHGVVRERDVTRY 188



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  D  +  A+  ++ + +S +++VD   + IGI    D L+ 
Sbjct: 17  SISPDKTIEDALNHMQSNAVSSIVIVDANNQPIGIFTEHDALKA 60


>gi|188585293|ref|YP_001916838.1| CBS domain containing protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
 gi|179349980|gb|ACB84250.1| CBS domain containing protein [Natranaerobius thermophilus
           JW/NM-WN-LF]
          Length = 142

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMI 290
           V  G  +  A  I+ E   G ++V D    + G++T+ DI       ++   +  E+ M 
Sbjct: 14  VDKGENVSRAAQIMRETNIGVLSVHDGEN-VVGMLTDRDIAIRNVALENSVNVPCEEAMT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +      +  +  A  ++ ++ +  L V+ +  K +G+V   DL
Sbjct: 73  ADVISCSPENSVEEAADIMAKYQVRRLPVI-ENGKLVGMVALGDL 116



 Score = 43.3 bits (101), Expect = 0.059,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V DVM      + +   ++ A Q++R+ NI VL V D     +G++   D+
Sbjct: 1   MKVRDVMTSEIFSVDKGENVSRAAQIMRETNIGVLSVHDGEN-VVGMLTDRDI 52


>gi|162420061|ref|YP_001606836.1| DNA-binding transcriptional regulator HexR [Yersinia pestis Angola]
 gi|165928337|ref|ZP_02224169.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|166009124|ref|ZP_02230022.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211186|ref|ZP_02237221.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167401414|ref|ZP_02306911.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167420116|ref|ZP_02311869.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424707|ref|ZP_02316460.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170024369|ref|YP_001720874.1| DNA-binding transcriptional regulator HexR [Yersinia
           pseudotuberculosis YPIII]
 gi|186895416|ref|YP_001872528.1| DNA-binding transcriptional regulator HexR [Yersinia
           pseudotuberculosis PB1/+]
 gi|294503869|ref|YP_003567931.1| putative transcriptional regulator HexR [Yersinia pestis Z176003]
 gi|162352876|gb|ABX86824.1| putative transcriptional regulator HexR [Yersinia pestis Angola]
 gi|165919620|gb|EDR36953.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991679|gb|EDR43980.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166208366|gb|EDR52846.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166961811|gb|EDR57832.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167049110|gb|EDR60518.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167056589|gb|EDR66358.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169750903|gb|ACA68421.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           YPIII]
 gi|186698442|gb|ACC89071.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           PB1/+]
 gi|262362012|gb|ACY58733.1| putative transcriptional regulator HexR [Yersinia pestis D106004]
 gi|294354328|gb|ADE64669.1| putative transcriptional regulator HexR [Yersinia pestis Z176003]
          Length = 301

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+           + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 115 MASLDRVKNNLDIAAINRAVDLLTQAK-KISFFGLGSSAAVAHDAMNKFFRFNIPVIYFD 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 174 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARENDAAVIAITS-CDTPLANEAT 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 233 LSLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 276


>gi|270490829|ref|ZP_06207903.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
 gi|262365851|gb|ACY62408.1| hex regulon repressor [Yersinia pestis D182038]
 gi|270339333|gb|EFA50110.1| transcriptional regulator, RpiR family [Yersinia pestis KIM D27]
          Length = 295

 Score = 70.7 bits (172), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+           + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 109 MASLDRVKNNLDIAAINRAVDLLTQAK-KISFFGLGSSAAVAHDAMNKFFRFNIPVIYFD 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 168 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARENDAAVIAITS-CDTPLANEAT 226

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 227 LSLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 270


>gi|328884908|emb|CCA58147.1| CBS domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 129

 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           +     L  A  +++ +R G   V+D      GI+TE DI       +D +  +      
Sbjct: 14  IGPAHTLRQAARLMAARRVGAAVVLDTDAGALGILTERDILNSLALDQDPDRETAGSHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++         L  A + +       L+V+DD    +G+V   D++R
Sbjct: 74  RDVVFAAPAWTLAEAAEAMTHGGFRHLVVLDDHG-PVGMVSVRDIIR 119



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D    A+GI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAARLMAARRVGAAVVLDTDAGALGILTERDIL 54


>gi|291556684|emb|CBL33801.1| IMP dehydrogenase/GMP reductase [Eubacterium siraeum V10Sc8a]
          Length = 502

 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 17/184 (9%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P        ES  +   P  SAIMQ    D +A+AL +     F      + 
Sbjct: 28  PANVSLRTPVVKFKKGEESSIYMNIPLVSAIMQSVSDDKMAVALAKEGGISFIYGSQSIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                +  +    +  + S  ++        L D + + ++     + V  +G    KL 
Sbjct: 88  DEAAMVARVKSYKAGYVKSDSNLA---PDMTLADVLELKAKTGHSTMPVTSDGTEHGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D      +      V   M            T L  A  ++ +H ++ L +VDD
Sbjct: 145 GIVTSRDYR--VSRMATDTKVSTFMTPFEKLITAPASTTLKEANDIIWEHKLNSLPIVDD 202

Query: 323 CQKA 326
               
Sbjct: 203 NGVL 206


>gi|89056293|ref|YP_511744.1| RpiR family transcriptional regulator [Jannaschia sp. CCS1]
 gi|88865842|gb|ABD56719.1| transcriptional regulator, RpiR family [Jannaschia sp. CCS1]
          Length = 306

 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 50/125 (40%), Gaps = 1/125 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L+ +L    +     A + +     RV ++G+G S  +       L   G    F  
Sbjct: 131 IHALQETLSINPAKNLDAARDALNGAA-RVQLSGVGASSLVARDFVYKLQKLGISVLFDA 189

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T DD+++ LS SG S E   I   A +    +I +T  + + +A  AD
Sbjct: 190 DSHIQMAHSATLTPDDVLVSLSQSGFSLETLRIAEAAAKRGATIITVTGLHPNPLADVAD 249

Query: 158 IVLTL 162
             L  
Sbjct: 250 KALCT 254


>gi|42783423|ref|NP_980670.1| CBS domain-containing protein [Bacillus cereus ATCC 10987]
 gi|52141204|ref|YP_085624.1| CBS domain-containing protein [Bacillus cereus E33L]
 gi|196039238|ref|ZP_03106544.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|196046413|ref|ZP_03113639.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|217961787|ref|YP_002340357.1| CBS domain protein [Bacillus cereus AH187]
 gi|222097742|ref|YP_002531799.1| cbs domain protein [Bacillus cereus Q1]
 gi|225866278|ref|YP_002751656.1| CBS domain protein [Bacillus cereus 03BB102]
 gi|228916929|ref|ZP_04080491.1| transcriptional regulator [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228929340|ref|ZP_04092365.1| transcriptional regulator [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228935617|ref|ZP_04098432.1| transcriptional regulator [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228948010|ref|ZP_04110296.1| transcriptional regulator [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228987547|ref|ZP_04147666.1| transcriptional regulator [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|229093366|ref|ZP_04224473.1| transcriptional regulator [Bacillus cereus Rock3-42]
 gi|229123835|ref|ZP_04253029.1| transcriptional regulator [Bacillus cereus 95/8201]
 gi|229141034|ref|ZP_04269577.1| transcriptional regulator [Bacillus cereus BDRD-ST26]
 gi|229157911|ref|ZP_04285985.1| transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|229186536|ref|ZP_04313698.1| transcriptional regulator [Bacillus cereus BGSC 6E1]
 gi|229198423|ref|ZP_04325129.1| transcriptional regulator [Bacillus cereus m1293]
 gi|42739352|gb|AAS43278.1| CBS domain protein [Bacillus cereus ATCC 10987]
 gi|51974673|gb|AAU16223.1| CBS domain protein [Bacillus cereus E33L]
 gi|196022883|gb|EDX61564.1| CBS domain protein [Bacillus cereus 03BB108]
 gi|196029865|gb|EDX68466.1| CBS domain protein [Bacillus cereus NVH0597-99]
 gi|217063647|gb|ACJ77897.1| CBS domain protein [Bacillus cereus AH187]
 gi|221241800|gb|ACM14510.1| CBS domain protein [Bacillus cereus Q1]
 gi|225785682|gb|ACO25899.1| CBS domain protein [Bacillus cereus 03BB102]
 gi|228585123|gb|EEK43235.1| transcriptional regulator [Bacillus cereus m1293]
 gi|228596967|gb|EEK54625.1| transcriptional regulator [Bacillus cereus BGSC 6E1]
 gi|228625570|gb|EEK82323.1| transcriptional regulator [Bacillus cereus ATCC 4342]
 gi|228642467|gb|EEK98755.1| transcriptional regulator [Bacillus cereus BDRD-ST26]
 gi|228659656|gb|EEL15302.1| transcriptional regulator [Bacillus cereus 95/8201]
 gi|228690022|gb|EEL43823.1| transcriptional regulator [Bacillus cereus Rock3-42]
 gi|228772279|gb|EEM20726.1| transcriptional regulator [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|228811700|gb|EEM58035.1| transcriptional regulator [Bacillus thuringiensis serovar monterrey
           BGSC 4AJ1]
 gi|228824057|gb|EEM69874.1| transcriptional regulator [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228830354|gb|EEM75966.1| transcriptional regulator [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|228842753|gb|EEM87839.1| transcriptional regulator [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|324328201|gb|ADY23461.1| putative signal-transduction protein with CBS domains [Bacillus
           thuringiensis serovar finitimus YBT-020]
          Length = 210

 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 180 VVKDTKQGLEVVGRITKTNITRA 202


>gi|89072944|ref|ZP_01159491.1| cyclic nucleotide binding protein/2 CBS domains [Photobacterium sp.
           SKA34]
 gi|89051162|gb|EAR56618.1| cyclic nucleotide binding protein/2 CBS domains [Photobacterium sp.
           SKA34]
          Length = 625

 Score = 70.3 bits (171), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 52/122 (42%), Gaps = 11/122 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK--------LKGIITEGDI-FRNFH 277
                ++     +  A   ++E+    + + D            + GIIT+ D+  R   
Sbjct: 157 TRDAVIIDQNETIQTAAQTMAEEGVSALLLSDSNATDDDDDNDYVTGIITDRDLCTRVLA 216

Query: 278 KDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++T   V  VM   P  +  +  +  AM  + ++NI  L V+   ++ IG++   D++
Sbjct: 217 EGISTSNPVSSVMTAEPITLDHNAYVFEAMLTMLRYNIHHLPVL-RNKQPIGVISVSDIV 275

Query: 337 RF 338
           R+
Sbjct: 276 RY 277


>gi|295681507|ref|YP_003610081.1| signal transduction protein [Burkholderia sp. CCGE1002]
 gi|295441402|gb|ADG20570.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1002]
          Length = 149

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 50/119 (42%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNF---HKD 279
               + + +    +++A  ++ E+  G + VV+         G++T+ DI         +
Sbjct: 7   CTRDVTVCRRQATILEAAQLMREQHVGDIVVVETIGGRSVPVGMLTDRDIVLAIVAKQAN 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + V DVM   P ++     L +A   +R + +  L VVD      GIV   DLLR 
Sbjct: 67  PEKIFVNDVMSSPPALVDAGDDLWLAASRMRLNGVRRLPVVDAAGALTGIVSLDDLLRA 125



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 9/52 (17%), Positives = 25/52 (48%), Gaps = 3/52 (5%)

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLL 336
           +  ++  V      +  A QL+R+ ++  ++VV+        +G++   D++
Sbjct: 6   ICTRDVTVCRRQATILEAAQLMREQHVGDIVVVETIGGRSVPVGMLTDRDIV 57


>gi|113460841|ref|YP_718908.1| RpiR family transcriptional regulator [Haemophilus somnus 129PT]
 gi|170717326|ref|YP_001784437.1| RpiR family transcriptional regulator [Haemophilus somnus 2336]
 gi|112822884|gb|ABI24973.1| transcriptional regulator, RpiR family [Haemophilus somnus 129PT]
 gi|168825455|gb|ACA30826.1| transcriptional regulator, RpiR family [Haemophilus somnus 2336]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 66/173 (38%), Gaps = 12/173 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           +Q  + ++I+E   L             Q    VE ++  K R+ + G+G SG    +  
Sbjct: 107 LQNVIHNVISETVNLLDFA---------QLEKVVELMRVSK-RIFLFGVGSSGLTAEEAK 156

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
           + L   G            +    ++   D++I +S SG S E    L  A++     +A
Sbjct: 157 NKLMRIGLHVDATSNNHFMYMQAALMNSSDIVIGISHSGYSKETVQALNIAKKNGAVTVA 216

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +T   +S +   +D VL                 + I QL + D +   ++++
Sbjct: 217 LTHNLRSPITMVSDYVLINGNRQGQLQGDSI--GTKIAQLFVLDLIYTLIVQA 267


>gi|291531914|emb|CBK97499.1| IMP dehydrogenase/GMP reductase [Eubacterium siraeum 70/3]
          Length = 502

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 17/184 (9%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P        ES  +   P  SAIMQ    D +A+AL +     F      + 
Sbjct: 28  PANVSLRTPVVKFRKGEESSIYMNIPLVSAIMQSVSDDKMAVALAKEGGISFIYGSQSIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                +  +    +  + S  ++        L D + + ++     + V  +G    KL 
Sbjct: 88  DEAAMVARVKSYKAGYVKSDSNLA---PDMTLADVLELKAKTGHSTMPVTSDGTEHGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D      +      V   M            T L  A  ++ +H ++ L +VDD
Sbjct: 145 GIVTSRDYR--VSRMATDTKVSTFMTPFEKLITAPASTTLKEANDIIWEHKLNSLPIVDD 202

Query: 323 CQKA 326
               
Sbjct: 203 NGVL 206


>gi|323152591|gb|EFZ38868.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           EPECa14]
          Length = 287

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 66  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 122

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 123 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 181

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 182 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 238

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 239 LAQLTVIDVLATGFTLRRGAKFRD 262


>gi|160879271|ref|YP_001558239.1| RpiR family transcriptional regulator [Clostridium phytofermentans
           ISDg]
 gi|160427937|gb|ABX41500.1| transcriptional regulator, RpiR family [Clostridium phytofermentans
           ISDg]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 5/185 (2%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           K+ST++    +I      L ++E ++   + +     V  I +    + + G+G S  + 
Sbjct: 93  KHSTLEQMCNTIRNTT--LQAVEDTI-KLIDYDTLKKVVSILSKASCIKLFGVGASALVA 149

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                 L        F +              +D+ ++ S+SG++ E+  I+  A++ + 
Sbjct: 150 DDFCKKLLRINKNVNFSYDMHTQLVYGANARPEDVAVIFSYSGTTKEMLEIMDLAKKSNC 209

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           P I IT   KS +   AD  + +     +   G    +S I QL I D L  +L      
Sbjct: 210 PTIVITKYTKSPLVASADYSIYISAPEINYRSGA--MSSRIAQLTIVDLLFTSLANKNYT 267

Query: 200 SENDF 204
           S   +
Sbjct: 268 SVEKY 272


>gi|307352325|ref|YP_003893376.1| 6-phospho-3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
 gi|307155558|gb|ADN34938.1| 6-phospho-3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
          Length = 204

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/186 (18%), Positives = 59/186 (31%), Gaps = 27/186 (14%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
             +   ++     +       I   + R+ + G G+SG I    A  L   G  S+ V  
Sbjct: 16  DEISRRIEEISDDEISSFTSSILTAR-RIYVAGAGRSGLIARAFAMRLMHIGLESYVVGE 74

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                     +   D ++V S +G ++ +  I    +     L  ITS   S +   AD 
Sbjct: 75  TVTP-----AMEPGDAVVVFSGTGETNSMVDIAESTKALGGTLCLITSHRGSSIGKLADY 129

Query: 159 VLTLPKEPES---------------------CPHGLAPTTSAIMQLAIGDALAIALLESR 197
           ++ +P EP                        P     T      +   DAL   L++ R
Sbjct: 130 IVEIPSEPPEDREWPNTFEVRQLTGGYKSLFQPLAAIGTFFETAAMIFSDALIADLMDIR 189

Query: 198 NFSEND 203
                +
Sbjct: 190 KCGIEE 195


>gi|189353150|ref|YP_001948777.1| CBS domain-containing membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337172|dbj|BAG46241.1| CBS domain-containing membrane protein [Burkholderia multivorans
           ATCC 17616]
          Length = 389

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 234 MQAYARTFGQLTCADLMTKNAISIAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTR 293

Query: 333 LDLLR 337
            DL R
Sbjct: 294 ADLTR 298



 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           +     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 257 IAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTRADLTRPLRRPAALWQRLSARLPE 316

Query: 284 -------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 317 SFGGQPPSVSTVMTRDVASVPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 376



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 336 VPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTQILEAA 389


>gi|14325574|dbj|BAB60477.1| hypothetical protein [Thermoplasma volcanium GSS1]
          Length = 174

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 3/109 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     + DA+ I++E R   + V D   K  G+I+E  I + F   +K  + + ++ VM
Sbjct: 12  VNENSSVFDAVKIMNENRLYGLIVKDNEGKDVGLISERSIIKRFIPRNKKPDEVQIKYVM 71

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K    +     +  A   L ++ +    VVD   K +GI+   DL R+
Sbjct: 72  RKPIPKVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTDLSRY 120



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 32/53 (60%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +E +M  N + + E++ +  A++++ ++ +  L+V D+  K +G++    +++
Sbjct: 1   MEKIMNTNYRSVNENSSVFDAVKIMNENRLYGLIVKDNEGKDVGLISERSIIK 53



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 19/59 (32%), Positives = 23/59 (38%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                     IP V     + DA   LSE      AVVD   K+ GIIT  D+ R   +
Sbjct: 65  VQIKYVMRKPIPKVPSSYDVRDAAAYLSENGLERCAVVDSTGKVVGIITLTDLSRYLSR 123


>gi|293446225|ref|ZP_06662647.1| HTH-type transcriptional regulator hexR [Escherichia coli B088]
 gi|300816255|ref|ZP_07096477.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
 gi|291323055|gb|EFE62483.1| HTH-type transcriptional regulator hexR [Escherichia coli B088]
 gi|300530945|gb|EFK52007.1| transcriptional regulator, RpiR family [Escherichia coli MS 107-1]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSMANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|258627169|ref|ZP_05721958.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258580546|gb|EEW05506.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 271

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/172 (15%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 65  MALAVDLSQSANQSQPKMDGDICEISAQSAV----DSLMDTAKLIDR---ASLNRICELV 117

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  +   G+G S  +G  LA  L   G  +        +    G     D+   +S 
Sbjct: 118 HNAQ-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGRSVSGDVWFAISS 176

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  + +I++T+ + S ++  +D +L   +       G
Sbjct: 177 SGSTKEVVHAATQAHQRGVRVISLTNISHSPLSSISDEMLVAARPEGPLTGG 228


>gi|157371009|ref|YP_001478998.1| DNA-binding transcriptional regulator HexR [Serratia proteamaculans
           568]
 gi|157322773|gb|ABV41870.1| transcriptional regulator, RpiR family [Serratia proteamaculans
           568]
          Length = 290

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 5/169 (2%)

Query: 36  RGLSSLESSLQGELS-FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
             + +   +++  L     + AV+ +   K ++   G+G S  +     +       P  
Sbjct: 100 ESVMASLDTVKANLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVV 158

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +              +  D+++++S +G +  L  +   AR     +IAITS   + +A 
Sbjct: 159 YFDDIVMQRMGCMNSSEGDVVVLISHTGRTKNLVEMAQLARENDATVIAITSR-DTPLAH 217

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            A + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 218 EATLALLLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|70731953|ref|YP_261695.1| DNA-binding transcriptional regulator HexR [Pseudomonas fluorescens
           Pf-5]
 gi|68346252|gb|AAY93858.1| transcriptional regulator HexR [Pseudomonas fluorescens Pf-5]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQALDPNLISKAVDLLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+E  
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARENGASVLGLTAE-N 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAKASTLSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|77460585|ref|YP_350092.1| DNA-binding transcriptional regulator HexR [Pseudomonas fluorescens
           Pf0-1]
 gi|77384588|gb|ABA76101.1| putative hex-regulon repressor [Pseudomonas fluorescens Pf0-1]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQALDPNLISRAVDLLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+E  
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARENGASVLGLTAE-N 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAKASTLSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|53725027|ref|YP_102645.1| SIS domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|52428450|gb|AAU49043.1| SIS domain protein [Burkholderia mallei ATCC 23344]
          Length = 375

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 199 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 254

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 255 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 308

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 309 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 361

Query: 199 FSEND 203
            +  +
Sbjct: 362 LNVEE 366


>gi|326517302|dbj|BAK00018.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 224

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 19/86 (22%), Positives = 41/86 (47%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + VVD   +  G++++ D  R    +    ++ +VM      +  +  +  A  L+ +H
Sbjct: 135 GLPVVDGEGRCIGVVSKKDKARA--SNGLDSTIGEVMSSPAVTLTLEKTVLEAAALMLKH 192

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  + VV++ Q+ IGIV   D+ + 
Sbjct: 193 KVHRIPVVNEQQQVIGIVTRTDVFQA 218



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 18/75 (24%), Positives = 27/75 (36%), Gaps = 9/75 (12%)

Query: 271 DIFRNFHKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           D+ +     +        T  + +VM +  +V   D  L     L      S L VVD  
Sbjct: 85  DLRQYLESQIVSTDKMSPTAKLGEVMSRPVEVATPDQKLAEIDALFATQ--SGLPVVDGE 142

Query: 324 QKAIGIVHFLDLLRF 338
            + IG+V   D  R 
Sbjct: 143 GRCIGVVSKKDKARA 157



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 24/41 (58%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
            +++A  ++ + +   + VV+E Q++ GI+T  D+F+    
Sbjct: 181 TVLEAAALMLKHKVHRIPVVNEQQQVIGIVTRTDVFQALEA 221


>gi|290959465|ref|YP_003490647.1| transcriptional regulator [Streptomyces scabiei 87.22]
 gi|260648991|emb|CBG72105.1| putative transcriptional regulator [Streptomyces scabiei 87.22]
          Length = 327

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G SG +   L   L   G  +        +  +   +   D+ + ++ SGS+ 
Sbjct: 171 RIDIYGVGASGLVAQDLTQKLLRIGLIAHAHSDPHLAVTNAVQLRAKDVAVAITHSGSTG 230

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V+ +AD VLT     ES     A  +S   QL +
Sbjct: 231 DVIEPLRVAFDHGATTIAITGRPDGPVSQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 289

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 290 VDCLFVGVAQR 300


>gi|170769456|ref|ZP_02903909.1| transcriptional regulator, rpiR family [Escherichia albertii
           TW07627]
 gi|170121780|gb|EDS90711.1| transcriptional regulator, rpiR family [Escherichia albertii
           TW07627]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-TGTPLAQEATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|145223257|ref|YP_001133935.1| signal-transduction protein [Mycobacterium gilvum PYR-GCK]
 gi|315443717|ref|YP_004076596.1| signal-transduction protein containing cAMP-binding and CBS domains
           [Mycobacterium sp. Spyr1]
 gi|145215743|gb|ABP45147.1| putative signal-transduction protein with CBS domains
           [Mycobacterium gilvum PYR-GCK]
 gi|315262020|gb|ADT98761.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Mycobacterium sp. Spyr1]
          Length = 142

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVM 289
           +     +   +T LS +  G + VV     L+GI++E DI R  H    DL    V ++M
Sbjct: 17  ITPETSVAGLLTELSVRNIGAMVVVSPDG-LQGIVSERDIVRKLHDMGADLLRRPVSEIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                    D  +     L+  + +  + VV    +  GIV   D+++
Sbjct: 76  TTLVATCTPDDSVDSLSALMTNNRVRHVPVV-VDGRLAGIVSIGDVVK 122


>gi|332879713|ref|ZP_08447404.1| CBS domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
 gi|332682340|gb|EGJ55246.1| CBS domain protein [Capnocytophaga sp. oral taxon 329 str. F0087]
          Length = 138

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             +  +     L DA  +  +     + VV EG K+ GI++  D+ R 
Sbjct: 1   MKQRVPVSQIMSKELITLTPTQSLYDAERLFKKHNIRHIPVV-EGDKIIGIVSYSDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              D+               ++  +M K P  +  DT +    ++L + +   + VV + 
Sbjct: 60  SFADMTDGEDEVTSVVYDMYTIPQIMAKTPLTVAADTSIKEVAEILAKQSFHSIPVV-EN 118

Query: 324 QKAIGIVHFLDLLRF 338
            K +G+V   DL+++
Sbjct: 119 GKLVGLVTTTDLIKY 133



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     + +   IL+++ F  + VV E  KL G++T  D+ +  
Sbjct: 92  VAADTSIKEVAEILAKQSFHSIPVV-ENGKLVGLVTTTDLIKYL 134


>gi|288554372|ref|YP_003426307.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Bacillus pseudofirmus OF4]
 gi|288545532|gb|ADC49415.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Bacillus pseudofirmus OF4]
          Length = 642

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/96 (28%), Positives = 45/96 (46%), Gaps = 3/96 (3%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMIKNPKVILEDTLLT 303
           + E+    V V+++G +L GIITE D+      +     +  ++VM  NP +I +D    
Sbjct: 198 MVERGTSSVVVLNDGDQLIGIITEKDLVARVVANGGGPGIVAKEVMTANPFIIADDAFYY 257

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            AM     + I  L V+    + +G+    DLLR  
Sbjct: 258 EAMSSFLMNGIKHLPVM-RRGRVVGMCTLSDLLRKK 292


>gi|167816132|ref|ZP_02447812.1| SIS domain protein [Burkholderia pseudomallei 91]
          Length = 345

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 169 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 224

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 225 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 278

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 279 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 331

Query: 199 FSEND 203
            +  +
Sbjct: 332 LNVEE 336


>gi|83595876|gb|ABC25238.1| CBS domain protein [uncultured marine bacterium Ant4D3]
          Length = 137

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 46/110 (41%), Gaps = 6/110 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-----NFHKDLNTLSVEDV 288
               PL  AI + SE       VVDE   L G+++E D  R      +HK+    +V + 
Sbjct: 19  YADTPLFKAIKVFSEHPVSGAPVVDEAGYLVGVMSEVDCLRGILNKTYHKEEVGGTVGEF 78

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M      +  +T +    +   Q     + VV++  K IG V   D+LR 
Sbjct: 79  MTTKVDTVDGNTDIIAVAEQFIQRGRRRIPVVEE-GKLIGQVSRKDILRA 127



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L ++ V D M +       DT L  A+++  +H +S   VVD+    +G++  +D LR G
Sbjct: 2   LQSVKVTDYMTRQLITFYADTPLFKAIKVFSEHPVSGAPVVDEAGYLVGVMSEVDCLR-G 60

Query: 340 II 341
           I+
Sbjct: 61  IL 62


>gi|47567861|ref|ZP_00238569.1| CBS domain protein [Bacillus cereus G9241]
 gi|118479467|ref|YP_896618.1| CBS domain-containing protein [Bacillus thuringiensis str. Al
           Hakam]
 gi|301055790|ref|YP_003794001.1| putative signal-transduction protein with CBS domains [Bacillus
           anthracis CI]
 gi|47555538|gb|EAL13881.1| CBS domain protein [Bacillus cereus G9241]
 gi|118418692|gb|ABK87111.1| CBS domain protein [Bacillus thuringiensis str. Al Hakam]
 gi|300377959|gb|ADK06863.1| putative signal-transduction protein with CBS domains [Bacillus
           cereus biovar anthracis str. CI]
          Length = 211

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 181 VVKDTKQGLEVVGRITKTNITRA 203


>gi|182416157|ref|YP_001821223.1| sugar isomerase (SIS) [Opitutus terrae PB90-1]
 gi|177843371|gb|ACB77623.1| sugar isomerase (SIS) [Opitutus terrae PB90-1]
          Length = 348

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 39/145 (26%), Positives = 68/145 (46%), Gaps = 3/145 (2%)

Query: 19  MKNSTVQCA-LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           MK + ++ A LR ++A+   +++  ++L          A      ++ RVV+TG+G S  
Sbjct: 1   MKPAVIEGAYLRDLLAQPAAVTATLTALNHGPDLARFRAAFTSGQLQ-RVVLTGMGSSYT 59

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
               L       G     V  +E  H   G +T + L++ +S SG+S E+  +L    R 
Sbjct: 60  ALHPLQLQWVRAGRTVVRVETSELVHHQPGWLTPETLVVAVSQSGASAEIIRLLE-LNRG 118

Query: 138 SIPLIAITSENKSVVACHADIVLTL 162
             P+I +T+   SV+A  AD  + L
Sbjct: 119 RAPVIGVTNTPDSVLARAADACVPL 143


>gi|150376163|ref|YP_001312759.1| RpiR family transcriptional regulator [Sinorhizobium medicae
           WSM419]
 gi|150030710|gb|ABR62826.1| transcriptional regulator, RpiR family [Sinorhizobium medicae
           WSM419]
          Length = 284

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/188 (21%), Positives = 72/188 (38%), Gaps = 8/188 (4%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +          + S +Q A R   A  + L+     L       F  A++ +   K  ++
Sbjct: 84  REAIEHSSGEPEASALQAAGRLFRAITQALNDTFGVLDE---ATFAKALDLVANAK-HIM 139

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G SG +           G        ++       +    DL++ +S+SG + +  
Sbjct: 140 VGGVGGSGIVAQAFYQRCIRLGLRCDAPIDSQLQIMHAALTGPGDLVVAISYSGITSDPV 199

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            +L  A+      + IT  + S +A  AD+VL       S   G  P  + I Q+ + DA
Sbjct: 200 LVLQEAKARGASTLCITGNSSSALARLADVVLV----SVSHEQGSEPMAAQIAQMTLVDA 255

Query: 189 LAIALLES 196
           L  AL+  
Sbjct: 256 LYAALVAR 263


>gi|69244286|ref|ZP_00602754.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257878376|ref|ZP_05658029.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257889425|ref|ZP_05669078.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257892632|ref|ZP_05672285.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|258616103|ref|ZP_05713873.1| RpiR family transcriptional regulator [Enterococcus faecium DO]
 gi|260559959|ref|ZP_05832138.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|293560515|ref|ZP_06677005.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|293568869|ref|ZP_06680182.1| transcriptional regulator [Enterococcus faecium E1071]
 gi|294617223|ref|ZP_06696871.1| transcriptional regulator [Enterococcus faecium E1679]
 gi|294621878|ref|ZP_06701033.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|314940501|ref|ZP_07847643.1| SIS domain protein [Enterococcus faecium TX0133a04]
 gi|314943266|ref|ZP_07850048.1| SIS domain protein [Enterococcus faecium TX0133C]
 gi|314948458|ref|ZP_07851843.1| SIS domain protein [Enterococcus faecium TX0082]
 gi|314952977|ref|ZP_07855939.1| SIS domain protein [Enterococcus faecium TX0133A]
 gi|314994212|ref|ZP_07859517.1| SIS domain protein [Enterococcus faecium TX0133B]
 gi|314997132|ref|ZP_07862120.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|68196472|gb|EAN10899.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Enterococcus
           faecium DO]
 gi|257812604|gb|EEV41362.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,230,933]
 gi|257825785|gb|EEV52411.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,410]
 gi|257829011|gb|EEV55618.1| phosphosugar isomerase transcriptional regulator [Enterococcus
           faecium 1,231,408]
 gi|260074183|gb|EEW62506.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus faecium
           C68]
 gi|291588302|gb|EFF20137.1| transcriptional regulator [Enterococcus faecium E1071]
 gi|291596512|gb|EFF27757.1| transcriptional regulator [Enterococcus faecium E1679]
 gi|291598537|gb|EFF29599.1| transcriptional regulator [Enterococcus faecium U0317]
 gi|291605482|gb|EFF34926.1| transcriptional regulator [Enterococcus faecium E1162]
 gi|313588802|gb|EFR67647.1| SIS domain protein [Enterococcus faecium TX0133a01]
 gi|313591393|gb|EFR70238.1| SIS domain protein [Enterococcus faecium TX0133B]
 gi|313594913|gb|EFR73758.1| SIS domain protein [Enterococcus faecium TX0133A]
 gi|313597994|gb|EFR76839.1| SIS domain protein [Enterococcus faecium TX0133C]
 gi|313640272|gb|EFS04853.1| SIS domain protein [Enterococcus faecium TX0133a04]
 gi|313645116|gb|EFS09696.1| SIS domain protein [Enterococcus faecium TX0082]
          Length = 282

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 78/195 (40%), Gaps = 8/195 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +   +++   +    ++ +  A +   +    L+  +  LQ +       A   I
Sbjct: 72  MLIQENDLSAISIHENIQKTDTELTMAQKVFESSISTLNDTKKLLQQK---DLKKAATII 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K RV   G+G S  + +        +   +           +  ++T  D  +++S 
Sbjct: 129 NESK-RVYFFGVGGSEIVATDAYHKFLRSPIATSHSTDYHIQLMEASLLTEKDCAVLISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSA 179
           +G S E   I    R+     I ITS+  S +A   D+V +++ +E E     LA   S 
Sbjct: 188 TGQSKETIHIAETVRKTGAKTIVITSQANSSLAKLGDVVFISISEETEFRSEALA---SR 244

Query: 180 IMQLAIGDALAIALL 194
           I QL+I D+L + L+
Sbjct: 245 ISQLSILDSLYVILM 259


>gi|328955281|ref|YP_004372614.1| RpiR family transcriptional regulator [Coriobacterium glomerans
           PW2]
 gi|328455605|gb|AEB06799.1| transcriptional regulator, RpiR family [Coriobacterium glomerans
           PW2]
          Length = 282

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/175 (17%), Positives = 59/175 (33%), Gaps = 3/175 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            G+SSL  +           AVE +K       + G+G S  I +        T     F
Sbjct: 104 NGISSLSLTYAALNEKGLDAAVEILKNAD-ICGLYGLGGSFPIAASAYHRFMRTSLTFIF 162

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                        +T+DD  +++S +G + ++  +         P++ IT    S +A  
Sbjct: 163 QQDYHLQLQTAARLTKDDCALIISHTGRNKDMLRVAKIIHERDAPIVTITGNVFSPLAKM 222

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
           + +V  +P              S++ Q+ + D L        +     F  +   
Sbjct: 223 SQVV--IPSISRETKLRPEALASSVSQILLVDTLFALYAIKVDNEPEYFSNIRKV 275


>gi|331683359|ref|ZP_08383960.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H299]
 gi|331079574|gb|EGI50771.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H299]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|261420193|ref|YP_003253875.1| RpiR family transcriptional regulator [Geobacillus sp. Y412MC61]
 gi|319767005|ref|YP_004132506.1| RpiR family transcriptional regulator [Geobacillus sp. Y412MC52]
 gi|261376650|gb|ACX79393.1| transcriptional regulator, RpiR family [Geobacillus sp. Y412MC61]
 gi|317111871|gb|ADU94363.1| transcriptional regulator, RpiR family [Geobacillus sp. Y412MC52]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 3/134 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +++  G+G S       +      G  +               +   D+ + +S SG + 
Sbjct: 135 KLLFYGVGGSAAAAMDASYKFTKLGYMAVMSLDFHIMLPLTAHLNEGDVFVAVSTSGRTK 194

Query: 126 ELKAILYYARRFSIPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           ++  I  +A++    +IAIT  +  S +   ADI L LP   +    G     S ++QL 
Sbjct: 195 DVLEIARFAKKQKATVIAITKLDPTSPLYKEADIKLALPDVEQDHRIG--SMASRMVQLN 252

Query: 185 IGDALAIALLESRN 198
           + DAL +       
Sbjct: 253 VIDALYLITFHRVG 266


>gi|170723355|ref|YP_001751043.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas putida W619]
 gi|169761358|gb|ACA74674.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas putida W619]
          Length = 489

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 61/171 (35%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    + V+      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQAGEVRKVKKFEAGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + D   +        V V+ E   L GI+T  D+   F   L    V DVM 
Sbjct: 98  ITIEADATVRDLFDLTRLNNISGVPVL-ENGDLVGIVTSRDVR--FETRL-DAKVRDVMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E        +LL +H +  +++VDD     G++   D+ +  
Sbjct: 154 PKERLVTVREGADKNEVRELLHKHRLEKVLIVDDKFSLKGMMTVKDIEKAK 204


>gi|147920212|ref|YP_686021.1| hypothetical protein RCIX1428 [uncultured methanogenic archaeon
           RC-I]
 gi|110621417|emb|CAJ36695.1| conserved hypothetical protein [uncultured methanogenic archaeon
           RC-I]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + ++ ++R   V VV +   L GI+T  D+ ++  ++     +  +M + P  I  D 
Sbjct: 26  EILDLMQKERISAVPVV-KEGTLLGIVTRIDLLKHPEEE----QIAMLMTREPVTITPDA 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L+ A  +L Q  +  L VV    K +GIV   D++  
Sbjct: 81  PLSRAAAILLQTGLRRLPVV-VRGKLVGIVTVSDIIGA 117



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +    PL  A  IL +     + VV    KL GI+T  DI     +      +
Sbjct: 69  MTREPVTITPDAPLSRAAAILLQTGLRRLPVVVR-GKLVGIVTVSDIIGAIGQMDIQDQI 127

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +      I ++T + VA +++R      L V++  ++  GI+   D++
Sbjct: 128 KNFIRDGVVAIWDETPVPVAAEIIRLSKRDALPVLNTKRELAGIISITDII 178



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 3/55 (5%)

Query: 284 SVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V+D+MIKN K I    T     + L+++  IS + VV      +GIV  +DLL+
Sbjct: 6   TVDDIMIKNVKSIEIPGTR-DEILDLMQKERISAVPVV-KEGTLLGIVTRIDLLK 58



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 46/271 (16%), Positives = 93/271 (34%), Gaps = 53/271 (19%)

Query: 109 ITRDDLIIVLSWS----GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           +T DD++I    S    G+ DE+  ++   R  ++P++    +  +++     I L    
Sbjct: 5   VTVDDIMIKNVKSIEIPGTRDEILDLMQKERISAVPVV----KEGTLLGIVTRIDLLKHP 60

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLE---------SRNFSENDFYVLHPGGKLGT 215
           E E     +      I   A     A  LL+          R        V    G +G 
Sbjct: 61  EEEQIAMLMTREPVTITPDAPLSRAAAILLQTGLRRLPVVVRGKLVGIVTVSDIIGAIGQ 120

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII--TE---- 269
           + +         D +  +    P+  A  I+   +   + V++  ++L GII  T+    
Sbjct: 121 MDIQDQIKNFIRDGVVAIWDETPVPVAAEIIRLSKRDALPVLNTKRELAGIISITDIINL 180

Query: 270 ---------GDIFRNFHKD---------------------LNTLSVEDVMIKNPKVILED 299
                     D+     +D                     L  + V+ VM+K+       
Sbjct: 181 SRIEDSVERSDMSAASDEDKWTWESMRDTMSLYYGVSRISLPDVPVKSVMVKSVITAFHK 240

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           T ++   + +R++ I  + V+    K  G++
Sbjct: 241 TPVSEVAKKMRRNRIEQVPVITADNKLDGLL 271


>gi|28898010|ref|NP_797615.1| DNA-binding transcriptional regulator HexR [Vibrio parahaemolyticus
           RIMD 2210633]
 gi|260364206|ref|ZP_05776909.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           K5030]
 gi|260877166|ref|ZP_05889521.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           AN-5034]
 gi|260899014|ref|ZP_05907455.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           Peru-466]
 gi|260900908|ref|ZP_05909303.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           AQ4037]
 gi|28806224|dbj|BAC59499.1| conserved hypothetical protein [Vibrio parahaemolyticus RIMD
           2210633]
 gi|308088690|gb|EFO38385.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           Peru-466]
 gi|308093759|gb|EFO43454.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           AN-5034]
 gi|308107152|gb|EFO44692.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           AQ4037]
 gi|308111857|gb|EFO49397.1| HTH-type transcriptional regulator HexR [Vibrio parahaemolyticus
           K5030]
 gi|328473034|gb|EGF43882.1| DNA-binding transcriptional regulator HexR [Vibrio parahaemolyticus
           10329]
          Length = 284

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 117 QVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + +TL    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASSLAITLDIPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|269986159|gb|EEZ92472.1| CBS domain containing membrane protein [Candidatus Parvarchaeum
           acidiphilum ARMAN-4]
          Length = 361

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V     +   I+I+ +   G + VVDE +K+ GII++ D+ +    D   ++  VEDV+I
Sbjct: 73  VLAKDSISKTISIMQDSGVGALPVVDEDKKVIGIISDFDVLKLLINDRIFDSFKVEDVVI 132

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++  D  +  A +L   + I  L +VD+  K +G +   D+L
Sbjct: 133 RRFPILRTDDTIGRAQKLAAINRIDNLPIVDNFGKLLGQISTSDIL 178



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 6/114 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
               +  V+    +  A+ I+  K+   + VV + +K  G+I   D+     +D+N  L 
Sbjct: 7   MTKKVVTVESNTNIEKALEIMDSKKIKELPVV-QNKKYAGLILYYDL---LSRDINKNLK 62

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D M K P V+ +D+ ++  + +++   +  L VVD+ +K IGI+   D+L+ 
Sbjct: 63  AADFMKKAPAVLAKDS-ISKTISIMQDSGVGALPVVDEDKKVIGIISDFDVLKL 115



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +M K    +  +T +  A++++    I  L VV   +K  G++ + DLL
Sbjct: 4   AKIMTKKVVTVESNTNIEKALEIMDSKKIKELPVV-QNKKYAGLILYYDLL 53



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 52/130 (40%), Gaps = 22/130 (16%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------- 273
              P+++    +  A  + +  R   + +VD   KL G I+  DI               
Sbjct: 133 RRFPILRTDDTIGRAQKLAAINRIDNLPIVDNFGKLLGQISTSDILSYIFEKKLTKSKGK 192

Query: 274 RNFHKDLNTLSVEDVM----IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           ++  K+    +  ++M     + PK +     L  A++L+    I   +V+D   K +GI
Sbjct: 193 KDMLKEEKLPTERNIMEIAKSEIPK-LNLTLNLRRALELMLTSKIKSGIVIDSNGKPVGI 251

Query: 330 VH---FLDLL 336
           +     LDLL
Sbjct: 252 LSRLKILDLL 261


>gi|300717072|ref|YP_003741875.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
 gi|299062908|emb|CAX60028.1| Transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
          Length = 290

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ L+    G  +   + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 102 AMAGLDRVRNGLDATAINRAVDLLTQSK-KIAFFGLGASAAVAHDAMNKFFRFNVPVIYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        T  D+++++S +G +  +  +   AR     ++AITS   S +A  A
Sbjct: 161 DDIVMQRMCCINSTEGDVVVLISHTGRTKNVVELAQLARENDATVLAITS-ADSPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + LTL    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLALTLDVPEDTDIY--MPMVSRLAQLTLIDVLATGFTLRRGAKFRD 264


>gi|70606976|ref|YP_255846.1| hypothetical protein Saci_1207 [Sulfolobus acidocaldarius DSM 639]
 gi|68567624|gb|AAY80553.1| conserved Archaeal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 126

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 48/116 (41%), Gaps = 3/116 (2%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
            +    I  V++   + +   ++ EK  G V +  E    KGI T+ D  + F   LN  
Sbjct: 6   TYMSTPIFQVELNTSIQETCKLMLEKGVGSVIIT-ENGAPKGIFTDRDAVKAFSSGLNPN 64

Query: 283 LSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V       N  +I EDT    A+ L+ ++ I  L V D     IG+    D+ +
Sbjct: 65  DEVRLAATMGNLIIIEEDTDPFTAIDLMTKNKIRHLPVKDKKGNIIGMFAITDISK 120


>gi|51596374|ref|YP_070565.1| DNA-binding transcriptional regulator HexR [Yersinia
           pseudotuberculosis IP 32953]
 gi|149366006|ref|ZP_01888041.1| hex regulon repressor [Yersinia pestis CA88-4125]
 gi|153950876|ref|YP_001400996.1| HexR family transcriptional regulator [Yersinia pseudotuberculosis
           IP 31758]
 gi|161484797|ref|NP_669554.2| DNA-binding transcriptional regulator HexR [Yersinia pestis KIM 10]
 gi|161511389|ref|NP_993249.2| DNA-binding transcriptional regulator HexR [Yersinia pestis biovar
           Microtus str. 91001]
 gi|162100174|ref|YP_651360.2| DNA-binding transcriptional regulator HexR [Yersinia pestis
           Antiqua]
 gi|162139441|ref|YP_647472.2| DNA-binding transcriptional regulator HexR [Yersinia pestis
           Nepal516]
 gi|165938908|ref|ZP_02227462.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|167469974|ref|ZP_02334678.1| DNA-binding transcriptional regulator HexR [Yersinia pestis FV-1]
 gi|218929172|ref|YP_002347047.1| DNA-binding transcriptional regulator HexR [Yersinia pestis CO92]
 gi|229894779|ref|ZP_04509959.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           Pestoides A]
 gi|229897483|ref|ZP_04512639.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229898129|ref|ZP_04513278.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229901989|ref|ZP_04517110.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           Nepal516]
 gi|51589656|emb|CAH21286.1| hex regulon repressor [Yersinia pseudotuberculosis IP 32953]
 gi|115347783|emb|CAL20700.1| hex regulon repressor [Yersinia pestis CO92]
 gi|149292419|gb|EDM42493.1| hex regulon repressor [Yersinia pestis CA88-4125]
 gi|152962371|gb|ABS49832.1| putative transcriptional regulator HexR [Yersinia
           pseudotuberculosis IP 31758]
 gi|165913271|gb|EDR31894.1| putative transcriptional regulator HexR [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|229680885|gb|EEO76980.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           Nepal516]
 gi|229688845|gb|EEO80912.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           biovar Orientalis str. India 195]
 gi|229693820|gb|EEO83869.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           biovar Orientalis str. PEXU2]
 gi|229702252|gb|EEO90271.1| predicted DNA-binding transcriptional regulator [Yersinia pestis
           Pestoides A]
 gi|320015256|gb|ADV98827.1| putative DNA-binding transcriptional regulator [Yersinia pestis
           biovar Medievalis str. Harbin 35]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+           + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 103 MASLDRVKNNLDIAAINRAVDLLTQAK-KISFFGLGSSAAVAHDAMNKFFRFNIPVIYFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IAITS   + +A  A 
Sbjct: 162 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAQLARENDAAVIAITS-CDTPLANEAT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 221 LSLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|13470471|ref|NP_102040.1| hypothetical protein mlr0188 [Mesorhizobium loti MAFF303099]
 gi|14021213|dbj|BAB47826.1| mlr0188 [Mesorhizobium loti MAFF303099]
          Length = 143

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 4/109 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIK 291
               L +AI IL+E + G + + +   K+ GI++E DI R   K+      ++V   M  
Sbjct: 19  PNEKLSEAIRILAEHKIGALVITNGDHKIVGILSERDIVRVVAKEGAAALDIAVRSAMTP 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             K+  E+  +   M+++ +     L V +      GIV   D+++  I
Sbjct: 79  KVKICNENHTVNEVMEIMTRGRFRHLPV-EKDGLLDGIVSIGDVVKRRI 126



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 25/43 (58%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +  L+ A+++L +H I  L++ +   K +GI+   D++R
Sbjct: 16  TLGPNEKLSEAIRILAEHKIGALVITNGDHKIVGILSERDIVR 58


>gi|152964738|ref|YP_001360522.1| RpiR family transcriptional regulator [Kineococcus radiotolerans
           SRS30216]
 gi|151359255|gb|ABS02258.1| transcriptional regulator, RpiR family [Kineococcus radiotolerans
           SRS30216]
          Length = 296

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 53/134 (39%), Gaps = 3/134 (2%)

Query: 66  RVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
           RVV   GIG SG + +      A  G  +       A+     ++   D  + +S SG +
Sbjct: 137 RVVDCYGIGASGLLAADFDHKAARVGLVTRLRTEGHAALVSSALLGPGDAALAVSHSGRT 196

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            +L      AR     +IA+TS   S +A  AD VL       +   G     S    L 
Sbjct: 197 PDLVGSARQARERGAAVIAVTSSPGSPLAAAADHVLVATGRETAYRAGA--MASRASSLL 254

Query: 185 IGDALAIALLESRN 198
           + D L +A+++   
Sbjct: 255 VLDCLYVAVVQRLG 268


>gi|291457020|ref|ZP_06596410.1| SIS domain protein [Bifidobacterium breve DSM 20213]
 gi|291381431|gb|EFE88949.1| SIS domain protein [Bifidobacterium breve DSM 20213]
          Length = 192

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/177 (21%), Positives = 60/177 (33%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  +    L ++   AV  +     R+V  G+G+ G         L   G  S +V 
Sbjct: 18  LTELRQTFD-HLDYRAVNAVLPVLQSARRIVCAGVGREGLTCRAFCMRLMHLGYDSHWVW 76

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A       ++  D+      SG    L  I   A+     ++ +T    S  A  AD
Sbjct: 77  DDTAP-----ALSEGDVFFFTCGSGQIAHLLTIAQLAKDTGATVVCVTGVPNSDAARLAD 131

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQL------AIGDALAIALLESRNFSENDFYVLH 208
            V+ +P         L PT   +  L       + DA+   L E  N    +    H
Sbjct: 132 HVVFIPASVYKGSGDLVPTVQPMGTLWETASWILLDAIVYGLHERDNIGYAEMAARH 188


>gi|152970915|ref|YP_001336024.1| DNA-binding transcriptional regulator HexR [Klebsiella pneumoniae
           subsp. pneumoniae MGH 78578]
 gi|150955764|gb|ABR77794.1| putative transcriptional regulator (N-terminal); putative
           sugar-binding domain of regulator protein (C-terminal)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
          Length = 295

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 33/167 (19%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+           + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 108 AMASLDQVHHSLDMSAVNRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS 166

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     +IA+TS   + +A  A
Sbjct: 167 DDIVLQRMSCMNCDDDDVVVIISHTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREA 225

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 226 TLAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 270


>gi|15802266|ref|NP_288290.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 EDL933]
 gi|15831817|ref|NP_310590.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 str. Sakai]
 gi|24113203|ref|NP_707713.1| DNA-binding transcriptional regulator HexR [Shigella flexneri 2a
           str. 301]
 gi|168752106|ref|ZP_02777128.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|168762353|ref|ZP_02787360.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|168770836|ref|ZP_02795843.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|168777754|ref|ZP_02802761.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|168783154|ref|ZP_02808161.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|168788274|ref|ZP_02813281.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|168802367|ref|ZP_02827374.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|170683767|ref|YP_001743391.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           SMS-3-5]
 gi|191168506|ref|ZP_03030293.1| transcriptional regulator, rpiR family [Escherichia coli B7A]
 gi|193069856|ref|ZP_03050805.1| transcriptional regulator, rpiR family [Escherichia coli E110019]
 gi|195939755|ref|ZP_03085137.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 str. EC4024]
 gi|208810603|ref|ZP_03252479.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208816758|ref|ZP_03257878.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|209400498|ref|YP_002270936.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209919220|ref|YP_002293304.1| DNA-binding transcriptional regulator HexR [Escherichia coli SE11]
 gi|217328614|ref|ZP_03444695.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218554427|ref|YP_002387340.1| DNA-binding transcriptional regulator HexR [Escherichia coli IAI1]
 gi|218699575|ref|YP_002407204.1| DNA-binding transcriptional regulator HexR [Escherichia coli IAI39]
 gi|218705354|ref|YP_002412873.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           UMN026]
 gi|254793477|ref|YP_003078314.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 str. TW14359]
 gi|256017957|ref|ZP_05431822.1| DNA-binding transcriptional regulator HexR [Shigella sp. D9]
 gi|260855779|ref|YP_003229670.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|260868374|ref|YP_003234776.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|261227646|ref|ZP_05941927.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK2000]
 gi|261258188|ref|ZP_05950721.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. FRIK966]
 gi|291283035|ref|YP_003499853.1| DNA-binding transcriptional regulator HexR [Escherichia coli O55:H7
           str. CB9615]
 gi|293410165|ref|ZP_06653741.1| DNA-binding transcriptional regulator HexR [Escherichia coli B354]
 gi|293415168|ref|ZP_06657811.1| HTH-type transcriptional regulator hexR [Escherichia coli B185]
 gi|300899103|ref|ZP_07117386.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300917571|ref|ZP_07134225.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300924926|ref|ZP_07140855.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|301026616|ref|ZP_07190037.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|301304425|ref|ZP_07210537.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|301327622|ref|ZP_07220835.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|309794234|ref|ZP_07688658.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|331653261|ref|ZP_08354266.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli M718]
 gi|331657901|ref|ZP_08358863.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA206]
 gi|331663349|ref|ZP_08364259.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA143]
 gi|332278991|ref|ZP_08391404.1| DNA-binding transcriptional regulator HexR [Shigella sp. D9]
 gi|12515909|gb|AAG56843.1|AE005408_1 orf, hypothetical protein [Escherichia coli O157:H7 str. EDL933]
 gi|13362031|dbj|BAB35986.1| hypothetical protein [Escherichia coli O157:H7 str. Sakai]
 gi|24052198|gb|AAN43420.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301]
 gi|170521485|gb|ACB19663.1| transcriptional regulator, rpiR family [Escherichia coli SMS-3-5]
 gi|187767075|gb|EDU30919.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4196]
 gi|188013985|gb|EDU52107.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4113]
 gi|188999484|gb|EDU68470.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4076]
 gi|189360281|gb|EDU78700.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4486]
 gi|189367333|gb|EDU85749.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4501]
 gi|189372014|gb|EDU90430.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC869]
 gi|189375634|gb|EDU94050.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC508]
 gi|190901459|gb|EDV61221.1| transcriptional regulator, rpiR family [Escherichia coli B7A]
 gi|192956756|gb|EDV87210.1| transcriptional regulator, rpiR family [Escherichia coli E110019]
 gi|208725119|gb|EDZ74826.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4206]
 gi|208731101|gb|EDZ79790.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4045]
 gi|209161898|gb|ACI39331.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. EC4115]
 gi|209767548|gb|ACI82086.1| hypothetical protein ECs2563 [Escherichia coli]
 gi|209767550|gb|ACI82087.1| hypothetical protein ECs2563 [Escherichia coli]
 gi|209767552|gb|ACI82088.1| hypothetical protein ECs2563 [Escherichia coli]
 gi|209767554|gb|ACI82089.1| hypothetical protein ECs2563 [Escherichia coli]
 gi|209767556|gb|ACI82090.1| hypothetical protein ECs2563 [Escherichia coli]
 gi|209912479|dbj|BAG77553.1| putative transcriptional regulator [Escherichia coli SE11]
 gi|217317961|gb|EEC26388.1| transcriptional regulator, rpiR family [Escherichia coli O157:H7
           str. TW14588]
 gi|218361195|emb|CAQ98779.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI1]
 gi|218369561|emb|CAR17330.1| putative DNA-binding transcriptional regulator [Escherichia coli
           IAI39]
 gi|218432451|emb|CAR13344.1| putative DNA-binding transcriptional regulator [Escherichia coli
           UMN026]
 gi|254592877|gb|ACT72238.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O157:H7 str. TW14359]
 gi|257754428|dbj|BAI25930.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O26:H11 str. 11368]
 gi|257764730|dbj|BAI36225.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O111:H- str. 11128]
 gi|281601268|gb|ADA74252.1| HTH-type transcriptional regulator hexR [Shigella flexneri 2002017]
 gi|284921773|emb|CBG34846.1| putative hex-regulon repressor (RpiR-family transcriptional
           regulator) [Escherichia coli 042]
 gi|290762908|gb|ADD56869.1| DNA-binding transcriptional regulator HexR [Escherichia coli O55:H7
           str. CB9615]
 gi|291432816|gb|EFF05795.1| HTH-type transcriptional regulator hexR [Escherichia coli B185]
 gi|291470633|gb|EFF13117.1| DNA-binding transcriptional regulator HexR [Escherichia coli B354]
 gi|300357260|gb|EFJ73130.1| transcriptional regulator, RpiR family [Escherichia coli MS 198-1]
 gi|300395412|gb|EFJ78950.1| transcriptional regulator, RpiR family [Escherichia coli MS 69-1]
 gi|300415200|gb|EFJ98510.1| transcriptional regulator, RpiR family [Escherichia coli MS 115-1]
 gi|300418912|gb|EFK02223.1| transcriptional regulator, RpiR family [Escherichia coli MS 182-1]
 gi|300840276|gb|EFK68036.1| transcriptional regulator, RpiR family [Escherichia coli MS 124-1]
 gi|300845825|gb|EFK73585.1| transcriptional regulator, RpiR family [Escherichia coli MS 78-1]
 gi|308122139|gb|EFO59401.1| transcriptional regulator, RpiR family [Escherichia coli MS 145-7]
 gi|315257334|gb|EFU37302.1| transcriptional regulator, RpiR family [Escherichia coli MS 85-1]
 gi|315299964|gb|EFU59202.1| transcriptional regulator, RpiR family [Escherichia coli MS 16-3]
 gi|320188554|gb|EFW63216.1| Phosphogluconate repressor HexR, RpiR family [Escherichia coli
           O157:H7 str. EC1212]
 gi|320198033|gb|EFW72641.1| Phosphogluconate repressor HexR, RpiR family [Escherichia coli
           EC4100B]
 gi|320641707|gb|EFX11095.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 str. G5101]
 gi|320647067|gb|EFX15900.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H- str. 493-89]
 gi|320652350|gb|EFX20648.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H- str. H 2687]
 gi|320657951|gb|EFX25713.1| DNA-binding transcriptional regulator HexR [Escherichia coli O55:H7
           str. 3256-97 TW 07815]
 gi|320658524|gb|EFX26218.1| DNA-binding transcriptional regulator HexR [Escherichia coli O55:H7
           str. USDA 5905]
 gi|320668422|gb|EFX35249.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           O157:H7 str. LSU-61]
 gi|323180633|gb|EFZ66178.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1180]
 gi|323186398|gb|EFZ71746.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           1357]
 gi|323186860|gb|EFZ72179.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           RN587/1]
 gi|323948261|gb|EGB44249.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H120]
 gi|324017996|gb|EGB87215.1| transcriptional regulator, RpiR family [Escherichia coli MS 117-3]
 gi|324118913|gb|EGC12802.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1167]
 gi|326342233|gb|EGD66014.1| Phosphogluconate repressor HexR, RpiR family [Escherichia coli
           O157:H7 str. 1044]
 gi|326343783|gb|EGD67545.1| Phosphogluconate repressor HexR, RpiR family [Escherichia coli
           O157:H7 str. 1125]
 gi|331049359|gb|EGI21431.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli M718]
 gi|331056149|gb|EGI28158.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA206]
 gi|331059148|gb|EGI31125.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA143]
 gi|332090027|gb|EGI95127.1| helix-turn-helix domain, rpiR family protein [Shigella boydii
           5216-82]
 gi|332101343|gb|EGJ04689.1| DNA-binding transcriptional regulator HexR [Shigella sp. D9]
 gi|332758041|gb|EGJ88367.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-671]
 gi|332766828|gb|EGJ97029.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           2930-71]
 gi|333003557|gb|EGK23097.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           VA-6]
 gi|333004788|gb|EGK24310.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-218]
 gi|333018618|gb|EGK37912.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-304]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|323968621|gb|EGB64027.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli M863]
 gi|323977963|gb|EGB73049.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli TW10509]
 gi|327252977|gb|EGE64631.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           STEC_7v]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|307298828|ref|ZP_07578630.1| 6-phospho 3-hexuloisomerase [Thermotogales bacterium mesG1.Ag.4.2]
 gi|306915253|gb|EFN45638.1| 6-phospho 3-hexuloisomerase [Thermotogales bacterium mesG1.Ag.4.2]
          Length = 186

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  + S L G          E I   + RV +  +G+SG      A  L   G     V 
Sbjct: 11  IDEIRSVLSGVTDESIEELSESILNAR-RVFLFAMGRSGLAIKAFAMRLMHLGLKVHVV- 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             E +   LG     DL+I+ S SG +  +      AR+F   + +IT+  +S VA  +D
Sbjct: 69  -GEVTSPSLG---EGDLLIIGSASGETPSVVLNSKKARKFGAGIASITASKESTVAGISD 124

Query: 158 IVLTLP-----KEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           IV+T+P         +    + P  +   Q    + D + + L+E  +      +  H
Sbjct: 125 IVITIPTKTPKVPDRAGVSSVQPMGNLFEQSLLILTDIVVMNLMERLSIDSETMFKNH 182


>gi|227517448|ref|ZP_03947497.1| transcriptional regulator RpiR [Enterococcus faecalis TX0104]
 gi|227554697|ref|ZP_03984744.1| transcriptional regulator RpiR [Enterococcus faecalis HH22]
 gi|307271351|ref|ZP_07552629.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|307286524|ref|ZP_07566620.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|227075053|gb|EEI13016.1| transcriptional regulator RpiR [Enterococcus faecalis TX0104]
 gi|227176197|gb|EEI57169.1| transcriptional regulator RpiR [Enterococcus faecalis HH22]
 gi|306502346|gb|EFM71625.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0109]
 gi|306511986|gb|EFM80978.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0855]
 gi|315027705|gb|EFT39637.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2137]
 gi|315165971|gb|EFU09988.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1302]
 gi|315574868|gb|EFU87059.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309B]
 gi|315582315|gb|EFU94506.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0309A]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|282600896|ref|ZP_05980053.2| inosine-5'-monophosphate dehydrogenase [Subdoligranulum variabile
           DSM 15176]
 gi|282570764|gb|EFB76299.1| inosine-5'-monophosphate dehydrogenase [Subdoligranulum variabile
           DSM 15176]
          Length = 473

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 12/169 (7%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASD 222
           E E       P  SAIMQ   G+ LAIAL +     F      +      +  +      
Sbjct: 16  EEECPLEMNIPMVSAIMQSVSGEKLAIALAKQGGVSFIYGSQTIEQEADMVRRVKAYKKG 75

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKD 279
            + S  ++        L D + + +      VA+ D+G    KL GI+   D      + 
Sbjct: 76  FVTSDSNL---PPEATLGDVLDLKTRTGHSTVAITDDGTAHGKLLGIVASRDYR--LSRM 130

Query: 280 LNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + L V + M            T L     ++  + I+ L +VD+    
Sbjct: 131 THDLKVTEFMTPLDKLVTAPATTSLHDCNDIIWDNKINSLPLVDEEGHL 179


>gi|223042414|ref|ZP_03612463.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus capitis SK14]
 gi|222444077|gb|EEE50173.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus capitis SK14]
          Length = 293

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K  +     L+ N       +      R   +L ++ +           + +      + 
Sbjct: 80  KEASVYNVELVDNENTDSLKK--KMHSRAKGALNNANEKIDDKTIDRICD-LFKCAETIF 136

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     V         L      D ++ ++ +G   E++
Sbjct: 137 IYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSEMR 196

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP++ ITS   + VA  +DIVL+   + +     +  TTS   Q+   D 
Sbjct: 197 SIAKVVSDYHIPVVTITSTKDNPVANRSDIVLSYG-QTDENEMRMGATTSLFAQMFTIDV 255

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 256 LYYRYIALNYQSSLDF 271


>gi|124485813|ref|YP_001030429.1| hexulose-6-phosphate isomerase [Methanocorpusculum labreanum Z]
 gi|124363354|gb|ABN07162.1| hexulose-6-phosphate isomerase [Methanocorpusculum labreanum Z]
          Length = 200

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 67/188 (35%), Gaps = 26/188 (13%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + ++   +  +    F  A+        R+ + G G+SG +    A  L  TG  ++ V 
Sbjct: 18  IDAIAQKIPTDQVDAFLDAI----LAADRIYVMGAGRSGLVAKSFAMRLMHTGFTAYVVG 73

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DLII  S SG++  +  I   A+     +  ++S  KS +   AD
Sbjct: 74  ETITP-----AIGDTDLIIAFSGSGNTKTIGDIAETAKGLGAKVALVSSNPKSRIGNIAD 128

Query: 158 IVLTL-----PKEPES----------CPHGLAPTTSAIMQL--AIGDALAIALLESRNFS 200
            ++ +     P   ++               AP  +         GDA+   L++ +   
Sbjct: 129 FIIEIETQRDPVTCDAHEYEIRQMLGEHRSFAPLGTIFETSSLMFGDAVISTLMDMKKIE 188

Query: 201 ENDFYVLH 208
           E D    H
Sbjct: 189 EADLKRRH 196


>gi|124008458|ref|ZP_01693151.1| CBS domain protein [Microscilla marina ATCC 23134]
 gi|123985966|gb|EAY25816.1| CBS domain protein [Microscilla marina ATCC 23134]
          Length = 140

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 59/126 (46%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
             D+   + +   LIDA  ++ +K+   + VVD  Q++ G+++  D+ R    D      
Sbjct: 11  MTDNPVTITLQDSLIDAQKMMEDKKIRHLPVVD-NQEIIGMLSYTDLMRVNFVDSYGKGN 69

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                   + L++E VMI     +  +T +  A ++L +     L V+D+    +GI+  
Sbjct: 70  EQVTTTLYSVLTIEQVMIDQLVTVNTETTIREAAEILSKKEFHALPVIDNNG-LVGIITT 128

Query: 333 LDLLRF 338
            DL+++
Sbjct: 129 TDLIKY 134



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V  +M  NP  I     L  A +++    I  L VVD+ +  IG++ + DL+R
Sbjct: 7   VTKIMTDNPVTITLQDSLIDAQKMMEDKKIRHLPVVDNQE-IIGMLSYTDLMR 58



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
             D +  V     + +A  ILS+K F  + V+D    L GIIT  D+ +  
Sbjct: 86  MIDQLVTVNTETTIREAAEILSKKEFHALPVIDNNG-LVGIITTTDLIKYL 135


>gi|121999068|ref|YP_001003855.1| isocitrate dehydrogenase, NADP-dependent [Halorhodospira halophila
           SL1]
 gi|121590473|gb|ABM63053.1| isocitrate dehydrogenase, NADP-dependent [Halorhodospira halophila
           SL1]
          Length = 589

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 9/130 (6%)

Query: 214 GTLFVCASDVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVV---DEGQKLKGIIT 268
                     +    +  LV +     + DA+ ++ E+R   V V    DE + + GI+T
Sbjct: 450 MVASGRVPHTVADLMNPNLVTMSGDTSVEDAMHLMRERRISSVVVQPAPDEAEGM-GIMT 508

Query: 269 EGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           + D+        K  + + + +   +    + EDT L    + +   NI  ++V+D   +
Sbjct: 509 QRDVISRVVSATKQPSQVRISEAATRPLITVPEDTSLLDCAERMGAENIRRMVVIDTQGR 568

Query: 326 AIGIVHFLDL 335
            IGI+   D+
Sbjct: 569 PIGIISDTDI 578


>gi|146295312|ref|YP_001179083.1| signal-transduction protein [Caldicellulosiruptor saccharolyticus
           DSM 8903]
 gi|145408888|gb|ABP65892.1| putative signal-transduction protein with CBS domains
           [Caldicellulosiruptor saccharolyticus DSM 8903]
          Length = 123

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               +  A+  + +++     VVDE   LKGII + DI+R   +     T  VE  M K 
Sbjct: 15  PADTVKHALEQMQKRKKSVAVVVDENDFLKGIIVKADIYRFLSQPGHFETYPVELAMTKV 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                ++  +    +LLR+++IS + V+D+  K IG+V   D++
Sbjct: 75  VITADKNDDIKHVAKLLRENDISAVPVLDN-GKVIGLVGLEDIV 117


>gi|116750106|ref|YP_846793.1| signal-transduction protein [Syntrophobacter fumaroxidans MPOB]
 gi|116699170|gb|ABK18358.1| putative signal-transduction protein with CBS domains
           [Syntrophobacter fumaroxidans MPOB]
          Length = 128

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 3/122 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           + A  +               + +   I+   R     VV+E  ++ G+I+   I R F 
Sbjct: 1   MEARVMSLMRRGAVTCTENMSVREVAQIMVVNRIYYCVVVNEDHEVLGVISARSILRGFG 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLD 334
            DL+     D+++     I   + L  A+ L+ +  I  L+VV D    +  +G++H  D
Sbjct: 61  MDLDRTKAGDILLHYTVTITPRSPLKEAINLMCRRKIEHLIVVSDHPGSKTILGLLHAED 120

Query: 335 LL 336
           ++
Sbjct: 121 IV 122



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              V  +M +      E+  +    Q++  + I   +VV++  + +G++    +LR
Sbjct: 2   EARVMSLMRRGAVTCTENMSVREVAQIMVVNRIYYCVVVNEDHEVLGVISARSILR 57


>gi|218885382|ref|YP_002434703.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218756336|gb|ACL07235.1| CBS domain containing membrane protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 150

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/139 (17%), Positives = 50/139 (35%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              +   V     + +A  I+ +++F  + VVD    L G+I + D+             
Sbjct: 8   MTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLIAQHKKLNLPTLF 67

Query: 273 --------FRNF------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                    R+        + ++  +V   M  +P  +  +T +     L+       L 
Sbjct: 68  TVLDGFIPLRSMSDLDEEMRKISATNVGQAMTPDPVTVGPETPIDEVASLMVDSKYHTLP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVD     +G++   D+LR
Sbjct: 128 VVD-AGSLVGVIGKEDVLR 145



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 26/52 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+M   P  +  +T +  A +++ Q   + L VVD     +G++   DL+
Sbjct: 4   AKDIMTAAPVTVTPETGIAEAARIMIQRKFNGLPVVDGKGTLVGVICQSDLI 55


>gi|161520665|ref|YP_001584092.1| CBS domain-containing protein [Burkholderia multivorans ATCC 17616]
 gi|221196289|ref|ZP_03569336.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2M]
 gi|221202962|ref|ZP_03575981.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2]
 gi|160344715|gb|ABX17800.1| CBS domain containing membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|221176896|gb|EEE09324.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2]
 gi|221182843|gb|EEE15243.1| membrane protein, HPP family/CBS domain [Burkholderia multivorans
           CGD2M]
          Length = 399

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/65 (33%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   I   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 244 MQAYARTFGQLTCADLMTKNAISIAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTR 303

Query: 333 LDLLR 337
            DL R
Sbjct: 304 ADLTR 308



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           +     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 267 IAPSTSITAALTLLDRHRVKALPVVDADGRLTGIVTRADLTRPLRRPAALWQRLSARLPE 326

Query: 284 -------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 327 SFGGQPPSVSTVMTRDVASVPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 386



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 346 VPQTLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTQILEAA 399


>gi|62180463|ref|YP_216880.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. SC-B67]
 gi|62128096|gb|AAX65799.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|322714938|gb|EFZ06509.1| DNA-binding transcriptional regulator HexR [Salmonella enterica
           subsp. enterica serovar Choleraesuis str. A50]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/204 (18%), Positives = 76/204 (37%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKS---AVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              + DD+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVTHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSDDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|307278869|ref|ZP_07559931.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
 gi|306504456|gb|EFM73664.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0860]
          Length = 284

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|292490801|ref|YP_003526240.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
 gi|291579396|gb|ADE13853.1| CBS domain containing protein [Nitrosococcus halophilus Nc4]
          Length = 150

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFHKD- 279
            +    + +  +   +++   ++     G V VV+   E     GI+T+ D+      + 
Sbjct: 5   QYCNREVIVTSLDTSILEVAQLMRRHHVGDVLVVEQQGEQNIPVGIVTDRDLVIEILAEE 64

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             L+ ++V+DVM      I E   L   +Q +R   I  + VV++     GI+   D+L
Sbjct: 65  IALDAVTVKDVMSSA-ITISEKADLWDTLQQMRYQGIRRMPVVNEKGSLEGILTVDDVL 122



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD---DCQKAIGIVHFLDLL 336
           +SV     +   V   DT +    QL+R+H++  ++VV+   +    +GIV   DL+
Sbjct: 1   MSVGQYCNREVIVTSLDTSILEVAQLMRRHHVGDVLVVEQQGEQNIPVGIVTDRDLV 57


>gi|229548486|ref|ZP_04437211.1| transcriptional regulator RpiR [Enterococcus faecalis ATCC 29200]
 gi|307270343|ref|ZP_07551650.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|307276115|ref|ZP_07557247.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|312904812|ref|ZP_07763954.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
 gi|312951308|ref|ZP_07770208.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|229306371|gb|EEN72367.1| transcriptional regulator RpiR [Enterococcus faecalis ATCC 29200]
 gi|306507193|gb|EFM76331.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2134]
 gi|306513320|gb|EFM81945.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4248]
 gi|310630694|gb|EFQ13977.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0102]
 gi|310631865|gb|EFQ15148.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0635]
 gi|315033198|gb|EFT45130.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0017]
 gi|315036076|gb|EFT48008.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0027]
 gi|315144300|gb|EFT88316.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX2141]
 gi|315155290|gb|EFT99306.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0043]
 gi|315162259|gb|EFU06276.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0645]
 gi|315578484|gb|EFU90675.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0630]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|258406596|ref|YP_003199338.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Desulfohalobium retbaense DSM
           5692]
 gi|257798823|gb|ACV69760.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Desulfohalobium retbaense DSM
           5692]
          Length = 642

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
               PL  A   +S +  G + V  E     GI+T+ D        K      +  +M  
Sbjct: 186 PSHMPLWQAAEKMSREGVGALLVYSEEGIPAGIVTDKDFRDKVVAQKRDGNEPLSAIMSA 245

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + +   T    A+  + + +   L+V D      G++   D +
Sbjct: 246 PVETVSGQTTSINALLQMMEKHFHHLVVEDSAHTPCGMISSHDFM 290


>gi|167750165|ref|ZP_02422292.1| hypothetical protein EUBSIR_01134 [Eubacterium siraeum DSM 15702]
 gi|167656908|gb|EDS01038.1| hypothetical protein EUBSIR_01134 [Eubacterium siraeum DSM 15702]
          Length = 502

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 37/184 (20%), Positives = 64/184 (34%), Gaps = 17/184 (9%)

Query: 155 HADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P        ES  +   P  SAIMQ    D +A+AL +     F      + 
Sbjct: 28  PANVSLRTPVVKFRKGEESSIYMNIPLVSAIMQSVSDDKMAVALAKEGGISFIYGSQSIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                +  +    +  + S  ++        L D + + ++     + V  +G    KL 
Sbjct: 88  DEAAMVARVKSYKAGYVKSDSNLA---PDMTLADVLELKAKTGHSTMPVTSDGTEHGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D      +      V   M            T L  A  ++ +H ++ L +VDD
Sbjct: 145 GIVTSRDYR--VSRMTTDTKVSTFMTPLEKLITAPASTTLKEANDIIWEHKLNSLPIVDD 202

Query: 323 CQKA 326
               
Sbjct: 203 NGVL 206


>gi|299067301|emb|CBJ38498.1| putative transcription regulator protein, RpiR family, SIS domain
           [Ralstonia solanacearum CMR15]
          Length = 246

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/220 (18%), Positives = 79/220 (35%), Gaps = 27/220 (12%)

Query: 14  KGHSLMKNSTVQCALRSIIAEK----------RGLSSLESSLQGELSFQFHCAVEKIKAI 63
           + ++L     ++    S+  E+           G+  L  +L  +    F  AV+ +   
Sbjct: 43  RDYNLRLREVIESGSASLQPEQIVDAFIKGSIAGMQQLRQALDQQ---AFAQAVDMLADT 99

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH-GDLGMITRDDLIIVLSWSG 122
           +  + I G  +S  +   L   L  T        A  + H G +  +   D++I +S++ 
Sbjct: 100 QA-IWIAGSRRSFPVAVYLDYALQHTDKRVGLFSALGSMHLGQIRSVREGDVLIAISFTP 158

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           +++E   +   A+R    +IA+T    S +A  A++ L      +S   G     +    
Sbjct: 159 NAEETIEVAQQAKRRGARMIALTDSRMSPLAREAEVTL---VVQDSTTFGF---RALTAT 212

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           + +  +L IAL      S        P    G        
Sbjct: 213 MGLAQSLFIALAYRLELS------YRPTSAGGEPEKDVMA 246


>gi|290475245|ref|YP_003468131.1| putative transcriptional regulator [Xenorhabdus bovienii SS-2004]
 gi|289174564|emb|CBJ81358.1| putative transcriptional regulator with phosphosugar-binding domain
           [Xenorhabdus bovienii SS-2004]
          Length = 282

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 63/166 (37%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++LE+          + AV+ +   + ++   G+G S  +     +       P  +  
Sbjct: 103 MANLETVKSNLDITAINRAVDLLTQAR-KISFFGLGASAAVAHDAMNKFFRFNIPITYFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D+++++S +G +  L  I   AR     +IAITS   S +A  A 
Sbjct: 162 DIVMQRMSCINSAEGDVVVLISHTGRTKNLVEIARLARENDATVIAITS-TGSPLAHEAT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + + L    ++  +   P  S I QL I D LA      R     D
Sbjct: 221 LSILLDVPEDTDIY--MPMVSRIAQLTIIDVLATGFTLRRGSKFRD 264


>gi|116748126|ref|YP_844813.1| polynucleotide adenylyltransferase region [Syntrophobacter
           fumaroxidans MPOB]
 gi|116697190|gb|ABK16378.1| Polynucleotide adenylyltransferase region [Syntrophobacter
           fumaroxidans MPOB]
          Length = 888

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 17/114 (14%), Positives = 44/114 (38%), Gaps = 2/114 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                +   +    + +A   +       + V+ E  ++ G+ T   + +     L   +
Sbjct: 314 MMTSPVIFTEPEVTVAEAGQSMIRYNINSMPVM-EDGRIVGLTTRQVLEKAIFHGLEKRA 372

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M  +   +  +  L      L + +  ++ V+ +  + IG++   DLL+F
Sbjct: 373 VREFMTTDFSTVGPNATLLEIESYLVERHQRIVPVM-EDNRVIGVITRRDLLKF 425



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + E +M         +  +  A Q + ++NI+ + V+ +  + +G+     L + 
Sbjct: 310 TAESMMTSPVIFTEPEVTVAEAGQSMIRYNINSMPVM-EDGRIVGLTTRQVLEKA 363


>gi|296332707|ref|ZP_06875167.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305673051|ref|YP_003864723.1| 6-phospho-3-hexuloisomerase [Bacillus subtilis subsp. spizizenii
           str. W23]
 gi|296149987|gb|EFG90876.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis subsp.
           spizizenii ATCC 6633]
 gi|305411295|gb|ADM36414.1| 6-phospho-3-hexuloisomerase (PHI) [Bacillus subtilis subsp.
           spizizenii str. W23]
          Length = 185

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/177 (20%), Positives = 67/177 (37%), Gaps = 12/177 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  S       +     + I +   ++   G G+SG +    A  L   G  +  V 
Sbjct: 11  LNELHRSAAYISDEEADQLADHILSS-NQIFTAGAGRSGLMAKSFAMRLMHMGFNAHIVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + + DL+I+ S SG +  L      A      + A+T   +S +   AD
Sbjct: 70  EILTPP-----LRKGDLVIIGSGSGETKSLIHTAAKANSLDGVVAALTINPESSIGKQAD 124

Query: 158 IVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           +++ +P  P+   +G    + P  S   Q      DA+ + L+E +    +  +  H
Sbjct: 125 LIVNMPGSPKDQSNGSYKTIQPMGSLFEQTLLLFYDAVILKLMEKQGLDSDTMFTHH 181


>gi|228471625|ref|ZP_04056399.1| CBS domain containing protein [Capnocytophaga gingivalis ATCC
           33624]
 gi|228277044|gb|EEK15730.1| CBS domain containing protein [Capnocytophaga gingivalis ATCC
           33624]
          Length = 138

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 53/135 (39%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             I  +     L +A  +  +     + VV EG KL G+++  D+ R 
Sbjct: 1   MKQRVPVSQIMSKDIVTLSPTQTLYEAEALFKKHHIRHIPVV-EGHKLIGVLSLTDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              DL+              ++  VM K P  I  DT +  A ++L +     L V D+ 
Sbjct: 60  SFADLSDDEKHVDSVVYDMFTIPQVMAKVPLAISPDTTIKEAAEILAEQTFHALPVTDNG 119

Query: 324 QKAIGIVHFLDLLRF 338
              +G++   DL+++
Sbjct: 120 N-LVGMLTTTDLIKY 133



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +     + +A  IL+E+ F  + V D    L G++T  D+ +  
Sbjct: 92  ISPDTTIKEAAEILAEQTFHALPVTD-NGNLVGMLTTTDLIKYL 134


>gi|116873094|ref|YP_849875.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741972|emb|CAK21096.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 283

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 2/134 (1%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           A + +      +   G+G S  +   ++      G        A           R  + 
Sbjct: 124 ACDLLGDADT-IYTYGVGASWLVAEDISQKWLRAGKHVLATQDAHVLAMAFATGKRKSVF 182

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S SG + E+  ++  A+   + +I++T    + +   AD+ L   + PE+     A 
Sbjct: 183 IAISNSGETSEVLQLVDQAKLNDVTVISLTRFGNNKLKEKADLALETSRAPEAEIRSTA- 241

Query: 176 TTSAIMQLAIGDAL 189
           T+S   QL + D L
Sbjct: 242 TSSRQAQLLVVDIL 255


>gi|90414609|ref|ZP_01222582.1| Putative acetoin utilization protein AcuB [Photobacterium profundum
           3TCK]
 gi|90324325|gb|EAS40894.1| Putative acetoin utilization protein AcuB [Photobacterium profundum
           3TCK]
          Length = 151

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 12/127 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
               +   ++    L DA  I+ +     + V D  ++L GI+T+ D+       L    
Sbjct: 7   MMTPNPHTLQPHNTLADAKAIMEDIGIRHIPVTDIDEQLIGIVTQRDVLSAQESSLESIT 66

Query: 282 --------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      +E  M +    +     L  A   +++H I  L VV+  ++ +GI+   
Sbjct: 67  KTDFHSNLDTPLEKCMHRTLMSVDPHAGLKEAAVYMQKHKIGCLPVVEK-KRLVGIITDT 125

Query: 334 DLLRFGI 340
           D +   I
Sbjct: 126 DFVSIAI 132



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V D+M  NP  +     L  A  ++    I  + V D  ++ IGIV   D+L  
Sbjct: 2   FTVSDMMTPNPHTLQPHNTLADAKAIMEDIGIRHIPVTDIDEQLIGIVTQRDVLSA 57


>gi|330795950|ref|XP_003286033.1| hypothetical protein DICPUDRAFT_53982 [Dictyostelium purpureum]
 gi|325084031|gb|EGC37469.1| hypothetical protein DICPUDRAFT_53982 [Dictyostelium purpureum]
          Length = 164

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 15/118 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----NFHKDLNTL----- 283
           VK    L   + IL  + +  + VVDE   L G++T+ D+       F  DL  +     
Sbjct: 28  VKPTDTLKHVLEILIREGYKRLPVVDENYNLLGVVTDKDLRSYSKSIFEHDLKDILDSLE 87

Query: 284 --SVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              V+D+ + +P   K       +    + +  H I+ + VVD+  K  GIV   DLL
Sbjct: 88  SYQVKDI-LVDPMLYKKAHHGERVIQCAKEMLVHQINGMPVVDEDGKLEGIVTRSDLL 144



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              VED+M +    +     L   +++L +     L VVD+    +G+V   DL
Sbjct: 14  NARVEDIMSRKIIGVKPTDTLKHVLEILIREGYKRLPVVDENYNLLGVVTDKDL 67



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/90 (20%), Positives = 35/90 (38%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R++S++ F                 D++           G  +I     +   +   + V
Sbjct: 68  RSYSKSIFEHDLKDILDSLESYQVKDILVDPMLYKKAHHGERVIQCAKEMLVHQINGMPV 127

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           VDE  KL+GI+T  D+     + L  L+++
Sbjct: 128 VDEDGKLEGIVTRSDLLDQLIRILEPLNIK 157


>gi|322368386|ref|ZP_08042955.1| chloride channel [Haladaptatus paucihalophilus DX253]
 gi|320552402|gb|EFW94047.1| chloride channel [Haladaptatus paucihalophilus DX253]
          Length = 622

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---------------DL 280
           G    DA+ +  + +   + +VDE   L GI+T  D+                     D 
Sbjct: 473 GSSCEDALMMFQQTKHHGLPIVDESGSLVGIMTLTDLESELTNSIIHTIEGREEINLPDE 532

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               VE +       +     L   + ++ + ++  + +VD+    +GIV   D+L  
Sbjct: 533 ELAPVEKIGTTEVLTVPPSANLLSVVDIMEKLDVGRIPIVDEENHPVGIVTRSDILDA 590



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 26/56 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  L+ +DVM  N   +   +    A+ + +Q     L +VD+    +GI+   DL
Sbjct: 454 LEDLTAKDVMTTNVDTLTTGSSCEDALMMFQQTKHHGLPIVDESGSLVGIMTLTDL 509



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V     L+  + I+ +   G + +VDE     GI+T  DI   + 
Sbjct: 548 VPPSANLLSVVDIMEKLDVGRIPIVDEENHPVGIVTRSDILDAYD 592


>gi|297560079|ref|YP_003679053.1| hypothetical protein Ndas_1105 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844527|gb|ADH66547.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 228

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/145 (17%), Positives = 48/145 (33%), Gaps = 27/145 (18%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---- 272
               SDVM +      V       +   +L       + V +    + G++++ D+    
Sbjct: 1   MHTVSDVMTTEVFS--VTGDTGYREIAEMLVTHGVSALPVTNGEGCVVGVVSDEDLLHKE 58

Query: 273 -----------FRNFHKDLNT----------LSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                             L +           +  ++M      +  D  + +A +L+ +
Sbjct: 59  EFTGGDYAPPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDASVVLAARLMER 118

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLL 336
           H +  L VVD     +GIV   DLL
Sbjct: 119 HGVKQLPVVDGDGHLLGIVSRRDLL 143



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 31/96 (32%), Gaps = 9/96 (9%)

Query: 193 LLESRNFSENDFY---------VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           LL    F+  D+           L  GG  G      +           V     ++ A 
Sbjct: 54  LLHKEEFTGGDYAPPLRARLRARLGSGGSAGDKATARNAAELMTGPAVTVSSDASVVLAA 113

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            ++       + VVD    L GI++  D+   F ++
Sbjct: 114 RLMERHGVKQLPVVDGDGHLLGIVSRRDLLSVFVRE 149


>gi|116254732|ref|YP_770568.1| CBS domain-containing protein [Rhizobium leguminosarum bv. viciae
           3841]
 gi|115259380|emb|CAK10515.1| putative CBS domain protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 160

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 48/148 (32%), Gaps = 28/148 (18%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +           +  V     + +A   +       V VVD   +  G+++EGD+ R+F 
Sbjct: 1   MTIPAKSMMTTDLVTVSPEATVAEAARCMLIHHVTAVPVVDADNRPLGLVSEGDVMRHFG 60

Query: 278 KD---------------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                        LN   V ++M        E+  L     L+ 
Sbjct: 61  SQFQSERAQWLRMLAEGETLAPEFLAEIRLNQQHVREIMHTAIISAGEEASLAELADLML 120

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +H I  + ++      +GIV   D++R 
Sbjct: 121 KHGIKRVPIL-RDGVLVGIVSRADVVRA 147


>gi|333018426|gb|EGK37724.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri
           K-227]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +                 D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCCDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|315145166|gb|EFT89182.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX2141]
 gi|315163074|gb|EFU07091.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0645]
 gi|315171770|gb|EFU15787.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX1342]
          Length = 397

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 265 ITPEKSLQEAIKLMREKRVDTLLVVDNSNVLKGFI---DVETLDQQRGKASSVGDILNKD 321

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 322 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 360



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 243 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSNVLKGFI 299


>gi|302348417|ref|YP_003816055.1| Voltage-gated chloride channel [Acidilobus saccharovorans 345-15]
 gi|302328829|gb|ADL19024.1| Voltage-gated chloride channel [Acidilobus saccharovorans 345-15]
          Length = 574

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 62/157 (39%), Gaps = 11/157 (7%)

Query: 188 ALAIALLESRNFS------ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
           ALA+A++  R  +      E+        G+     +    V         V+    + +
Sbjct: 410 ALAVAMIVFRGPTLLREQVESRARSPVHAGEYAIPVLRKVRVAEVPPRQLYVRQDARVSE 469

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ +++      + VVD   ++ GI+   D+     +          M   P  +  D+ 
Sbjct: 470 ALQVIASAGLLSLPVVDPLGRVLGIVNSVDLR----QGRPEEPAMKYMRPEPGHVRPDSS 525

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  A+ ++ + N S   +V+D  K +GIV   D++R 
Sbjct: 526 LEEAINMMSRTN-SRYAIVEDNGKFMGIVTLDDVVRA 561



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 28/68 (41%), Gaps = 1/68 (1%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L         + +       V+    L +AI ++S       A+V++  K  GI+T  D
Sbjct: 499 DLRQGRPEEPAMKYMRPEPGHVRPDSSLEEAINMMSRTN-SRYAIVEDNGKFMGIVTLDD 557

Query: 272 IFRNFHKD 279
           + R + ++
Sbjct: 558 VVRAYERE 565


>gi|300859964|ref|ZP_07106052.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TUSoD Ef11]
 gi|300850782|gb|EFK78531.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TUSoD Ef11]
          Length = 394

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVVDNSNVLKGFI---DVETLDQQRGKASSVGDILNKD 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 319 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 240 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSNVLKGFI 296


>gi|332360944|gb|EGJ38749.1| CBS domain protein [Streptococcus sanguinis SK355]
          Length = 209

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   ++  +  A  +L+   I  L VVD+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKNMNILEAAAVLQDFAIDSLPVVDEDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|293395409|ref|ZP_06639693.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291422093|gb|EFE95338.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 288

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 64/166 (38%), Gaps = 3/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE++ +   +     AV  +   +  + I   G S     +L   L   G P    +
Sbjct: 102 ISVLETNRRALDTEALQLAVNWLSQARQILAIGMGGGSTICAQELQHRLFRLGLPVVHQN 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D++I LS  G + EL      AR++   +IAIT    + +A  AD
Sbjct: 162 DGLLVRMMCAAVAPKDVVIALSLGGHASELTNSAAIARQYGAKVIAITP-PDTPLAEQAD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L            P+TS    LA+ D LA  L  +      D
Sbjct: 221 LVLPLVVRENDYIFK--PSTSRYAMLAMVDVLATELAMANKAQAKD 264


>gi|238927655|ref|ZP_04659415.1| possible acetoin dehydrogenase AcuB [Selenomonas flueggei ATCC
           43531]
 gi|238884580|gb|EEQ48218.1| possible acetoin dehydrogenase AcuB [Selenomonas flueggei ATCC
           43531]
          Length = 214

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +     + +A  I+ +  F  + VV E  KL G  T  D+ R          
Sbjct: 6   CMTKNPITIAPDVGIDEAAKIMDKGHFRRLPVV-EHGKLVGFFTNRDLLRASPSAATTLD 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V DVM KN   + + T +  A  ++ +  I  + V+ +  K +GI+  
Sbjct: 65  RFELRTLLSKIKVADVMQKNVITVTDTTTIEEAALIMAREKIGGMPVLSEIGKVVGIISS 124

Query: 333 LDLLRF 338
            D+ R 
Sbjct: 125 TDIFRA 130



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M KNP  I  D  +  A +++ + +   L VV +  K +G     DLLR 
Sbjct: 3   VANCMTKNPITIAPDVGIDEAAKIMDKGHFRRLPVV-EHGKLVGFFTNRDLLRA 55


>gi|327399218|ref|YP_004340087.1| Cl- channel voltage-gated family protein [Hippea maritima DSM
           10411]
 gi|327181847|gb|AEA34028.1| Cl- channel voltage-gated family protein [Hippea maritima DSM
           10411]
          Length = 594

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 51/133 (38%), Gaps = 2/133 (1%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H    +  +                V     L     ILSE +   + V+D   KL+GI+
Sbjct: 451 HKYEFVRDVLEGIKVKELMKKDFVSVSGSTSLAKIFEILSEAKQTDIPVIDNSNKLQGIV 510

Query: 268 TEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T   +     +    + L  EDV  KN     ++  L   M  +    I+ + VV+D  +
Sbjct: 511 TLHVLKSILGEGELADFLVAEDVANKNVITTTQEENLNTLMHKIGFREINTIPVVNDQGQ 570

Query: 326 AIGIVHFLDLLRF 338
            IGI+   D+++ 
Sbjct: 571 IIGIITRKDIIKA 583


>gi|329896814|ref|ZP_08271730.1| Inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           IMCC3088]
 gi|328921569|gb|EGG28949.1| Inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           IMCC3088]
          Length = 489

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +            +     ++  +    S V+ S  + 
Sbjct: 41  NVPLVSAAMDTVTEAQLAIAIAQEGGIGVIHKSMTIEEQAAQVRKVKKYESGVVKSPIT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    L +   +        V V+D G+ L GI+T  D+   F  D +  SV  +M 
Sbjct: 100 --IQKSATLEELTDLTKANGISGVPVLD-GKDLVGIVTRRDLR--FETDFSK-SVSQIMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E     +  QLL QH I  ++VV+D  +  G++   D  + 
Sbjct: 154 PKEQLVTVKEGASSELVQQLLHQHRIEKILVVNDDFELCGMITVKDFDKA 203


>gi|229543498|ref|ZP_04432558.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
 gi|229327918|gb|EEN93593.1| CBS domain containing membrane protein [Bacillus coagulans 36D1]
          Length = 215

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 9/120 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +  +     + DA+ ++ +++   + ++D+  KL G++TE DI             
Sbjct: 7   MQKDVKTLSPRHTVQDALKLMQKEQIRHIPLLDQNGKLCGVVTERDIKEVAPNPFFPGEQ 66

Query: 282 ----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +L +E +M  +         +     L+  + I  L ++ +  +  GIV   DLL+
Sbjct: 67  LEKLSLPLEKIMKTDLLTGHPLDFIEDIAALMNDNRIGCLPIL-ENGQLAGIVTGTDLLQ 125



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 28/51 (54%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M K+ K +     +  A++L+++  I  + ++D   K  G+V   D+
Sbjct: 3   VEEIMQKDVKTLSPRHTVQDALKLMQKEQIRHIPLLDQNGKLCGVVTERDI 53


>gi|325525284|gb|EGD03138.1| CBS domain-containing protein [Burkholderia sp. TJI49]
          Length = 235

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 46/120 (38%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 103 VAPSTSVTAALTLLDRHRVKALPVVDGDGRLTGIVTRADLTRQLRRPTPLWQRLSARLPE 162

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM +    + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 163 AFGGQPASVATVMTREVASVPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 222



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +T A+ LL +H +  L VVD   +  GIV  
Sbjct: 80  MQAYARTFGQLTCADLMTKNAVSVAPSTSVTAALTLLDRHRVKALPVVDGDGRLTGIVTR 139

Query: 333 LDLLR 337
            DL R
Sbjct: 140 ADLTR 144



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    H+    L+  
Sbjct: 182 VPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLHRQTQMLAAA 235


>gi|156933568|ref|YP_001437484.1| DNA-binding transcriptional regulator HexR [Cronobacter sakazakii
           ATCC BAA-894]
 gi|156531822|gb|ABU76648.1| hypothetical protein ESA_01388 [Cronobacter sakazakii ATCC BAA-894]
          Length = 298

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 64/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+   Q       + AV+ +   K ++   G+G S  +     +       P  + 
Sbjct: 112 AMASLDHVRQSLDMATVNRAVDMLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYS 170

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DD+++++S +G +  L  +   AR     ++AITS   S +A  A
Sbjct: 171 DDIVVQRMSCMNGGADDVVVLISHTGRTKSLVELARLARDNDALVLAITSRG-SPLAREA 229

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + L L    ++  +   P  S + QL + D LA      R     D
Sbjct: 230 SLALLLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 274


>gi|15600631|ref|NP_254125.1| transcriptional regulator [Pseudomonas aeruginosa PAO1]
 gi|107104541|ref|ZP_01368459.1| hypothetical protein PaerPA_01005619 [Pseudomonas aeruginosa PACS2]
 gi|116053587|ref|YP_793914.1| RpiR family transcriptional regulator [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254237877|ref|ZP_04931200.1| hypothetical protein PACG_03979 [Pseudomonas aeruginosa C3719]
 gi|254242990|ref|ZP_04936312.1| hypothetical protein PA2G_03777 [Pseudomonas aeruginosa 2192]
 gi|296392300|ref|ZP_06881775.1| RpiR family transcriptional regulator [Pseudomonas aeruginosa PAb1]
 gi|313111625|ref|ZP_07797423.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
 gi|9951767|gb|AAG08823.1|AE004956_7 probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
 gi|115588808|gb|ABJ14823.1| putative transcriptional regulator, RpiR family [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126169808|gb|EAZ55319.1| hypothetical protein PACG_03979 [Pseudomonas aeruginosa C3719]
 gi|126196368|gb|EAZ60431.1| hypothetical protein PA2G_03777 [Pseudomonas aeruginosa 2192]
 gi|310883925|gb|EFQ42519.1| putative transcriptional regulator [Pseudomonas aeruginosa 39016]
          Length = 293

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S    +L+        L  +   L          A+  I   + RV   G G SG + 
Sbjct: 88  SDSVADFSLKIFDTTLHSLMEVREHLDT---HALERAIAAIAHAQ-RVEFYGFGASGAVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           S            +               +   D+ I +S SG S +L       R    
Sbjct: 144 SDAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPSDVAICISQSGRSKDLLITANLVREAGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LI +       +A  A + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 204 TLITLCPSQT-PLADLATVNLAIDVHEDTDIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|302875236|ref|YP_003843869.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
 gi|307687911|ref|ZP_07630357.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
 gi|302578093|gb|ADL52105.1| Nucleotidyl transferase [Clostridium cellulovorans 743B]
          Length = 351

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 2/104 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           ++     +I A+  +       + VVDE   L   +T+GDI R   K+ +    V+ +M 
Sbjct: 7   MIDKEMTIIAALKKIDTSARKILFVVDESMALIATLTDGDIRRWILKNGDLNAPVKTIMN 66

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + PK ++ +     A  +++Q+ I+ L +VD+ +  I +V + D
Sbjct: 67  REPKYLMSNEE-YRAKDVMQQYLITALPIVDEKKVVIRVVFWND 109


>gi|238788511|ref|ZP_04632304.1| Hex regulon repressor [Yersinia frederiksenii ATCC 33641]
 gi|238723424|gb|EEQ15071.1| Hex regulon repressor [Yersinia frederiksenii ATCC 33641]
          Length = 301

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ +         + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 115 MASLDMAKNNLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFD 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  + + AR     +IAITS   + +A  A 
Sbjct: 174 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLANEAT 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 233 LPLLLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 276


>gi|222033745|emb|CAP76486.1| sugar phosphate aminotransferase [Escherichia coli LF82]
 gi|312946599|gb|ADR27426.1| sugar isomerase (SIS) [Escherichia coli O83:H1 str. NRG 857C]
 gi|324008911|gb|EGB78130.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 57-2]
          Length = 186

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 69/178 (38%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE++       Q    + +I+  +  + + G G+SG      A+ L   G     V 
Sbjct: 11  LHELENNALKIDDSQAAQFISQIRNAR-HIFLQGAGRSGIAIRAFANRLLHLGFSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A    + +  +T +  S +   A 
Sbjct: 70  EISSPHT-----QPGDLLIIGSGSGETTSLKSLAQKAVDSGVNVALVTMKADSTIGKLAQ 124

Query: 158 IVLTLPKEPESCPHGLA-----PTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            VL LP   +   + +A     P  SA  Q      DA+ +AL+     S    +  H
Sbjct: 125 SVLVLPGSVKDDNNRVAGTFAQPMGSAFEQLCFITYDAIVLALMSELGESSATMFTRH 182


>gi|145298331|ref|YP_001141172.1| DNA-binding transcriptional regulator HexR [Aeromonas salmonicida
           subsp. salmonicida A449]
 gi|142851103|gb|ABO89424.1| transcriptional regulator HexR [Aeromonas salmonicida subsp.
           salmonicida A449]
          Length = 285

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           I     ++   G+G S  +     +       P                 +  D+++++S
Sbjct: 125 ILTQANKISFFGLGASSAVARDAQNKFFRFNIPVVGFDDIVMMRMSCINSSEGDVVVLIS 184

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  I   AR     +I IT++  S +A   ++VL++    ++  +   P  S 
Sbjct: 185 HTGRTKALVEIAALARENDGTVIGITAK-DSPLARECNLVLSMDVPEDTDVY--MPMASR 241

Query: 180 IMQLAIGDALAIALLESRNFS 200
           I QLA+ D LA      R   
Sbjct: 242 IAQLALVDVLATGFTLRRGMK 262


>gi|118593740|ref|ZP_01551109.1| transcriptional regulatory protein [Stappia aggregata IAM 12614]
 gi|118433650|gb|EAV40313.1| transcriptional regulatory protein [Stappia aggregata IAM 12614]
          Length = 307

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 6/163 (3%)

Query: 37  GLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSF 94
            L +  + ++ ++       AVEKI A + +++  GIG  S  +  + AS     G P+ 
Sbjct: 120 ALYATANVMRQQVDPAVIERAVEKIAACR-QLLTAGIGGGSTMVAGEAASRFFRLGIPTV 178

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +H +         +  DD+++ +S SG +DEL +    A  +    IAI  +  S +A 
Sbjct: 179 ALHDSYLLQMRAATLGPDDVLLCVSASGEADELVSAAEIAGGYGATTIAIAPKG-SRLAL 237

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            + I + +    +   +   PT S    L I DA+A+ + + R
Sbjct: 238 ISKIPILVDLPEDPDIYK--PTASRYAHLVIVDAIAMTVAQVR 278


>gi|327484346|gb|AEA78753.1| Sialic acid utilization regulator, RpiR family [Vibrio cholerae
           LMA3894-4]
          Length = 278

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 59/172 (34%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 72  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 124

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 125 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 183

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+   +  A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 184 SGSTKEVVHAVTQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 235


>gi|171321618|ref|ZP_02910546.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
 gi|171093102|gb|EDT38322.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
          Length = 391

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDDRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVAAALTLLERHRVKALPVVDGDDRLIGIVTRADLTRQVRRPTPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPPSVATVMTRDVAAVPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 338 VPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYRQTQMLEAA 391


>gi|88604138|ref|YP_504316.1| XRE family transcriptional regulator [Methanospirillum hungatei
           JF-1]
 gi|88189600|gb|ABD42597.1| transcriptional regulator, XRE family [Methanospirillum hungatei
           JF-1]
          Length = 252

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 31/116 (26%), Positives = 54/116 (46%), Gaps = 10/116 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--------LNTLSV 285
           K G  +  A  ++   +   V VVDE  + +GIIT+ DI     K+        +++  +
Sbjct: 15  KPGDTVSHARNLMLRHKISRVLVVDE-GRARGIITKKDIGFRLRKNDPDWRYRKMDSAPL 73

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             VM  +   +  D+ +  A+ LL  H IS   V+D     +GI+   D+LR  ++
Sbjct: 74  SQVMSTDLVSLSPDSSIRDALLLLVSHEISGAPVID-QGMVLGILTRTDILRSHLV 128



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 36/180 (20%), Positives = 71/180 (39%), Gaps = 8/180 (4%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF-SENDF-YVLHPGGKLGTLF 217
           ++ P         ++   + +++  I   L +    +R   ++ D  + L          
Sbjct: 7   MSTPVHAAKPGDTVSHARNLMLRHKISRVLVVDEGRARGIITKKDIGFRLRKNDPDWRYR 66

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
              S  +    S  LV       + DA+ +L         V+D+G  L GI+T  DI R+
Sbjct: 67  KMDSAPLSQVMSTDLVSLSPDSSIRDALLLLVSHEISGAPVIDQGMVL-GILTRTDILRS 125

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  + V ++M + P ++  +      + L+ +     ++VVDD   A+GI+   DL
Sbjct: 126 HLVAQLDIPVHEIMHE-PAMVTPEHSPVHVVDLM-KKGAGAVIVVDDGG-AVGIITESDL 182



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V D+M            ++ A  L+ +H IS ++VVD+  +A GI+   D+
Sbjct: 3   VSDLMSTPVHAAKPGDTVSHARNLMLRHKISRVLVVDE-GRARGIITKKDI 52


>gi|304438252|ref|ZP_07398193.1| CBS domain protein/ACT domain-containing protein [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
 gi|304368618|gb|EFM22302.1| CBS domain protein/ACT domain-containing protein [Selenomonas sp.
           oral taxon 149 str. 67H29BP]
          Length = 214

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 13/126 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +   +     + +A  I+ +  F  + VV E  KL G  T  D+ R          
Sbjct: 6   CMTKNPITIAPDVGIDEAAKIMDKGHFRRLPVV-EHGKLVGFFTNRDLLRASPSAATTLD 64

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L+ + V DVM KN   + + T +  A  ++ +  I  + V+ +  K +GI+  
Sbjct: 65  RFELRTLLSKIKVADVMQKNVITVTDTTTIEEAALIMAREKIGGMPVLSEIGKVVGIISS 124

Query: 333 LDLLRF 338
            D+ R 
Sbjct: 125 TDIFRA 130



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M KNP  I  D  +  A +++ + +   L VV +  K +G     DLLR 
Sbjct: 3   VANCMTKNPITIAPDVGIDEAAKIMDKGHFRRLPVV-EHGKLVGFFTNRDLLRA 55


>gi|229819321|ref|YP_002880847.1| CBS domain containing membrane protein [Beutenbergia cavernae DSM
           12333]
 gi|229565234|gb|ACQ79085.1| CBS domain containing membrane protein [Beutenbergia cavernae DSM
           12333]
          Length = 143

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 53/122 (43%), Gaps = 5/122 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHK 278
           A  +   G  +  V     + + +  L  +R G + V VD G+ + GI++E D+ R+ H 
Sbjct: 4   ADVIRRKGADVFTVSPETTVAELVAELDSRRIGALVVSVDGGETVSGIVSERDVVRHLHV 63

Query: 279 D---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           D   +    V D+M +  +  + +  +    + +    +  L VV    +   IV   D+
Sbjct: 64  DGAAVLQRPVADIMTEKVETCVPEDEIESLARRMTDLRVRHLPVV-VDGRLKAIVSIGDV 122

Query: 336 LR 337
           ++
Sbjct: 123 VK 124


>gi|289582889|ref|YP_003481355.1| CBS domain containing protein [Natrialba magadii ATCC 43099]
 gi|289532442|gb|ADD06793.1| CBS domain containing protein [Natrialba magadii ATCC 43099]
          Length = 268

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 45/113 (39%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     +      ++E        V + ++++G I+  D+      D     
Sbjct: 15  YMTRDVVTVSPDSTVGAVAERIAESEEHSGFPVCDRRRVEGFISARDLLLAGDDD----P 70

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  VM  +  V   +  +  A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 71  IFKVMTTDLLVAHPEMKVNDAARVILRSGIQKLPVVDDAGNLVGIISNADVIR 123



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 26/65 (40%), Gaps = 2/65 (3%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +     V++ M ++   +  D+ +  VA ++      S   V D  ++  G +   D
Sbjct: 3   LASERTKPQVKEYMTRDVVTVSPDSTVGAVAERIAESEEHSGFPVCD-RRRVEGFISARD 61

Query: 335 LLRFG 339
           LL  G
Sbjct: 62  LLLAG 66


>gi|187733824|ref|YP_001880656.1| DNA-binding transcriptional regulator HexR [Shigella boydii CDC
           3083-94]
 gi|187430816|gb|ACD10090.1| transcriptional regulator, rpiR family [Shigella boydii CDC
           3083-94]
          Length = 289

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVKLAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|15668736|ref|NP_247535.1| hypothetical protein MJ_0556 [Methanocaldococcus jannaschii DSM
           2661]
 gi|1591261|gb|AAB98550.1| hypothetical protein MJ_0556 [Methanocaldococcus jannaschii DSM
           2661]
          Length = 185

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +     + +      + +    + +     + VVD+   + G IT  +I +     
Sbjct: 34  RVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIGFITLREIRKYMTSH 93

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDC------QKAIGIVH 331
              L+V +VM+KNP     D  +  A + + +    +  L V++         K  GI+ 
Sbjct: 94  PY-LNVGEVMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIF 152

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 153 MEDIIKL 159



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + R  +K  +L  + V+DVMI    +I   +  +      + +HNIS + VVDD    IG
Sbjct: 20  LVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIG 79

Query: 329 IVHFLDLLRF 338
            +   ++ ++
Sbjct: 80  FITLREIRKY 89


>gi|330936962|gb|EGH41068.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           pisi str. 1704B]
          Length = 489

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|283852449|ref|ZP_06369718.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
 gi|283572187|gb|EFC20178.1| CBS domain containing protein [Desulfovibrio sp. FW1012B]
          Length = 255

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 2/119 (1%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             V        LV     +  A  +++ +   C+A V  G K+ G +TE D+ R+   DL
Sbjct: 4   RKVGELAKRPHLVAADASVTQAAAVMAREGVSCLAAV-TGAKVVGFLTERDLVRHLDVDL 62

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + + + +    I  D  ++ A++L+ +  +  L VVD     +G+V   +L+  
Sbjct: 63  EPHTPIREFLSRPTGAIARDLPVSEAVKLMLERRVRHLAVVDFGGSLLGLVTDKELVDA 121



 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 3/104 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMI 290
           +    P+ +A+ ++ E+R   +AVVD G  L G++T+ ++      D    SV    +M 
Sbjct: 79  IARDLPVSEAVKLMLERRVRHLAVVDFGGSLLGLVTDKELVDALAVDFMVESVTCRQLMR 138

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +   +  D  +  A+ L+R  N+  ++VV    +  GI    D
Sbjct: 139 PDTAALPPDRPVREALALMRLRNVGCILVV-ADGRPAGIFSERD 181



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 43/105 (40%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHK-DLNTLSVEDVMIK 291
               P+ +A+ ++  +  GC+ VV    +  GI +E D   R   + +     +   M  
Sbjct: 145 PPDRPVREALALMRLRNVGCILVV-ADGRPAGIFSERDATARIMGRPERLAEPLSGHMSA 203

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +  D L+   +  +RQ  +  + V++      GI+   D+L
Sbjct: 204 PVVAVPADALVYKVILFMRQKGVRRVAVIEADGTLSGILTQQDIL 248



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 21/49 (42%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           H    +  V     +   I  + +K    VAV++    L GI+T+ DI 
Sbjct: 200 HMSAPVVAVPADALVYKVILFMRQKGVRRVAVIEADGTLSGILTQQDIL 248


>gi|104783363|ref|YP_609861.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas entomophila
           L48]
 gi|95112350|emb|CAK17077.1| inosine-5-monophosphate dehydrogenase [Pseudomonas entomophila L48]
          Length = 489

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 34/171 (19%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    + V+      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQAGEVRKVKKFEAGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D   +        V V+ E   L GI+T  D+   F   L    V DVM 
Sbjct: 98  ITIDADATVRDLFDLTRLNNISGVPVL-ENGDLVGIVTSRDVR--FETRL-DAKVRDVMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E        +LL +H +  +++VDD     G++   D+ +  
Sbjct: 154 PKERLVTVREGADKNEVRELLHKHRLEKVLIVDDKFALKGMMTVKDIEKAK 204


>gi|145220442|ref|YP_001131151.1| signal-transduction protein [Prosthecochloris vibrioformis DSM 265]
 gi|145206606|gb|ABP37649.1| putative signal-transduction protein with CBS domains [Chlorobium
           phaeovibrioides DSM 265]
          Length = 174

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIF-------RNFH 277
                 ++K  C + +A+  + +     + V         G+ITE DI         + H
Sbjct: 42  MQKDFAMIKGSCTVAEALQTMKKSGESGLIVEPRNEDDCYGVITERDILGKVIDPGEDIH 101

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    I     +  A++++++ N+  L V+D   K +G+++  D+L 
Sbjct: 102 RDPWNTPVFQIMSKPVISINPSLRVKYALRMMKRTNVRRLTVMD-GNKVVGVLNMTDVLH 160

Query: 338 F 338
            
Sbjct: 161 A 161


>gi|268325653|emb|CBH39241.1| hypothetical protein containing CBS domain pair [uncultured
           archaeon]
          Length = 260

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKN 292
              +I   +I+ E   G V +  E  K  GIITE DI       +K  + +  ++VM   
Sbjct: 17  DTGIIKIASIMEELGVGSVVITAES-KPAGIITERDIALKVLLKNKLASEVKAKEVMTSP 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  DT +  A +L  +  I  L VVD+    IG+V   ++L
Sbjct: 76  LITVESDTSVEEASKLAAKSGIKRLPVVDN-GVLIGVVSVRNIL 118


>gi|222149685|ref|YP_002550642.1| hypothetical protein Avi_3655 [Agrobacterium vitis S4]
 gi|221736667|gb|ACM37630.1| conserved hypothetical protein [Agrobacterium vitis S4]
          Length = 389

 Score = 70.3 bits (171), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 26/157 (16%), Positives = 51/157 (32%), Gaps = 20/157 (12%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            D                 +        +  +     L +A+  L + R   + V  E  
Sbjct: 223 EDILRRTELRAYRRRSSHTTCGAVMIAGVAALSPDTTLSEALHRLRQSRVKALPVTAEDA 282

Query: 262 KLKGIITEGDIF---------------RNFHKDLNTL-----SVEDVMIKNPKVILEDTL 301
            + GI+T+ D+                R     L        +V+D+M    + +  D  
Sbjct: 283 TILGIVTQTDLMDKASWSRGRPMIGLGRRLALALQGASAPNGTVKDIMTTPVRTVTPDAP 342

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ A+    +  +  L V++   K IG++   D+L  
Sbjct: 343 LSEAIVTFAEAALHHLPVINAQAKLIGMIAQTDVLMA 379



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    PL +AI   +E     + V++   KL G+I + D+    
Sbjct: 330 MTTPVRTVTPDAPLSEAIVTFAEAALHHLPVINAQAKLIGMIAQTDVLMAM 380


>gi|317048510|ref|YP_004116158.1| RpiR family transcriptional regulator [Pantoea sp. At-9b]
 gi|316950127|gb|ADU69602.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
          Length = 304

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/232 (17%), Positives = 83/232 (35%), Gaps = 9/232 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +    S  K        + +N +V+  + +   +   GLS +   L   +    H AV  
Sbjct: 80  LQLAQSLAKGPNWVSRGVEENDSVESYSQKIFDSALAGLSRVSQQLDRAV---IHQAVHA 136

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+G S  +     +       P  +                +D+ +++S
Sbjct: 137 LTRA-NKIAFFGLGASAVVAHDATNKFLRFNLPVIWSEDIVIQRMSCINSGPNDVFVLIS 195

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  +  +   AR  +  ++AITS   S +A  A + LTL    ++  +   P  S 
Sbjct: 196 HTGRTKNMIELARLARVNASTVLAITS-PGSPLAAEATLALTLDVPEDTDIY--LPMVSR 252

Query: 180 IMQLAIGDALAIALLESRNFS-ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           + QL + D LA      R  S   +   +    +   L       +++  + 
Sbjct: 253 LAQLTLVDVLATGFTLERGTSFRENLKRVKEALRDSRLEKHVQQEINAQQNN 304


>gi|153840158|ref|ZP_01992825.1| transcriptional regulator HexR [Vibrio parahaemolyticus AQ3810]
 gi|149746198|gb|EDM57308.1| transcriptional regulator HexR [Vibrio parahaemolyticus AQ3810]
          Length = 287

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 59/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 120 QVNRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPITCFEDIVMQRMSCINCSD 178

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + +TL    ++  +
Sbjct: 179 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLEKASSLAITLDIPEDTDVY 237

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 238 --MPMASRVVQMTVIDVLATGFTLRRG 262


>gi|76801802|ref|YP_326810.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76557667|emb|CAI49250.1| CBS domain protein / probable chromosome partitioning protein
           [Natronomonas pharaonis DSM 2160]
          Length = 271

 Score = 70.3 bits (171), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     + D    +++        V +G+ + G ++  D+     +D     
Sbjct: 19  YMTRDVATVSPDDTVEDVAQRIADSDSHSGYPVCDGRTVDGFVSARDLL--LAED--HEP 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  VM ++  V   D  LT A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 75  IFKVMTEDIIVAHPDMKLTDAARVILRSGIQQLPVVDDAGNLVGIISNADVIR 127


>gi|332798702|ref|YP_004460201.1| putative signal transduction protein with CBS and DRTGG domains
           [Tepidanaerobacter sp. Re1]
 gi|332696437|gb|AEE90894.1| putative signal transduction protein with CBS and DRTGG domains
           [Tepidanaerobacter sp. Re1]
          Length = 432

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/85 (30%), Positives = 48/85 (56%), Gaps = 5/85 (5%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             VVD+  K+ GI+T  DI  +   D+    ++DVM K+P V+ +DT +  A +L+    
Sbjct: 222 FPVVDKNMKVCGIVTTNDIS-SLKDDVL---IKDVMSKDPIVLTKDTPVAHAARLMGWEG 277

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I ++ VV + ++ +GI+   D ++ 
Sbjct: 278 IKLIPVV-EDKRLVGILTRKDAIKA 301


>gi|319954746|ref|YP_004166013.1| cbs domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Cellulophaga algicola DSM 14237]
 gi|319423406|gb|ADV50515.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Cellulophaga algicola DSM 14237]
          Length = 638

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 45/109 (41%), Gaps = 6/109 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMI 290
                 +  A  I++ K+ G + +V +     GIIT+ D+           T +V  +M 
Sbjct: 180 CGPRTTVKRAAEIMTAKQVGAIIIV-KDALPIGIITDKDLRNKIVTGDYPITTAVSKIMT 238

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC---QKAIGIVHFLDLL 336
                  ++  +T A   + + NIS L +  D     K +GI+   D++
Sbjct: 239 SPVITYPKNLTITQAQMAMMKSNISHLCLTKDGTVATKLVGILSKHDVM 287


>gi|309777353|ref|ZP_07672314.1| 3-hexulose-6-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
 gi|308914894|gb|EFP60673.1| 3-hexulose-6-phosphate isomerase [Erysipelotrichaceae bacterium
           3_1_53]
          Length = 190

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 41/167 (24%), Positives = 66/167 (39%), Gaps = 12/167 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIK---GRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           L+ + + L      +     E+I   +    +V   G G+S  +    +  L   G  S+
Sbjct: 12  LADIRNVLSNVSVEETELLCERILKCREENRKVFCAGAGRSRLMMQAFSMRLMHMGMASY 71

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            I   DL+I+ S SG +  L  +L  A++     I ITS   S +A 
Sbjct: 72  MVQEISTP-----AIREHDLLIIGSGSGETKTLSIMLQTAKKEHADSILITSNADSSMAH 126

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNF 199
            A+ V+ +P    +   GL P  S   Q    + D+    L+E  NF
Sbjct: 127 EANTVIHIP--TAAATDGLQPGGSIFEQSMLILLDSTFKRLMEKGNF 171


>gi|298492660|ref|YP_003722837.1| CBS domain-containing protein ['Nostoc azollae' 0708]
 gi|298234578|gb|ADI65714.1| CBS domain containing protein ['Nostoc azollae' 0708]
          Length = 204

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 46/115 (40%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFR---NFHKDLN 281
               +  ++    + +A+ ++ EK    + V         GI+TE DI      + KD  
Sbjct: 8   MTKDVVTIRGSATVAEAVGLMKEKGLRALVVNRRYDNDAYGIVTETDIVYKVAAYGKDPK 67

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L V ++M K   ++  D  +    +L     I    V+    K +GI+   D+L
Sbjct: 68  QLRVYEIMSKPCIIVDPDLSVEYVARLFANAGIRRAPVI--QGKLLGIISITDIL 120



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLL 336
           +  ED+M K+   I     +  A+ L+++  +  L VV+      A GIV   D++
Sbjct: 2   MKAEDIMTKDVVTIRGSATVAEAVGLMKEKGLRAL-VVNRRYDNDAYGIVTETDIV 56


>gi|294496296|ref|YP_003542789.1| XRE family transcriptional regulator [Methanohalophilus mahii DSM
           5219]
 gi|292667295|gb|ADE37144.1| putative transcriptional regulator, XRE family [Methanohalophilus
           mahii DSM 5219]
          Length = 154

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/138 (18%), Positives = 48/138 (34%), Gaps = 35/138 (25%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
                 + DA   L +     + VVD    + GI++E D+                    
Sbjct: 14  CSPEDKVSDAARSLKDNDISGMPVVD-NGNIVGILSEVDLLALLEIPEHGDFWLPSPFEV 72

Query: 274 --------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                         +    D+ ++ V  +M      +  +  +  A  L+ +H I+ L V
Sbjct: 73  IEIPIREFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPV 132

Query: 320 VDDCQKAIGIVHFLDLLR 337
           V++  K  GI+   D++R
Sbjct: 133 VEND-KLTGIITRGDIIR 149



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+++M  +      +  ++ A + L+ ++IS + VVD+    +GI+  +DLL
Sbjct: 3   VKEIMNSDVIYCSPEDKVSDAARSLKDNDISGMPVVDNGN-IVGILSEVDLL 53



 Score = 45.7 bits (107), Expect = 0.011,   Method: Composition-based stats.
 Identities = 19/75 (25%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F       K+ +              +  V     + DA  ++S  +   + VV E  K
Sbjct: 79  EFISWEDTKKMLSDVGSMPVSKIMRYGVFTVSPEDSIEDASHLMSRHKINRLPVV-ENDK 137

Query: 263 LKGIITEGDIFRNFH 277
           L GIIT GDI R   
Sbjct: 138 LTGIITRGDIIRGIG 152


>gi|218894541|ref|YP_002443411.1| putative transcriptional regulator [Pseudomonas aeruginosa LESB58]
 gi|218774770|emb|CAW30587.1| probable transcriptional regulator [Pseudomonas aeruginosa LESB58]
          Length = 290

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 58/179 (32%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S    +L+        L  +   L          A+  I   + RV   G G SG + 
Sbjct: 88  SDSVADFSLKIFDTTLHSLMEVREHLDT---HALERAIAAIAHAQ-RVEFYGFGASGAVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           S            +               +   D+ I +S SG S +L       R    
Sbjct: 144 SDAQHKFFRLLLSAAAYSDPHMQAMSALTLKPSDVAICISQSGRSKDLLITANLVREAGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LI +       +A  A + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 204 TLITLCPSQT-PLADLATVNLAIDVHEDTDIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|33771376|gb|AAQ54304.1| putative brown planthopper susceptibility protein Hd002A [Oryza
           sativa Indica Group]
          Length = 173

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 2/86 (2%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            + V+D   +  G+I + D  R  H   +   + +VM      +  D  +  A  L+ + 
Sbjct: 83  GLPVIDASLRCVGVIVKSDRARASHG--SKTKIAEVMTSPAITLPSDKTVMDAAALMLKK 140

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  L +V+  ++ IGIV   D+LR 
Sbjct: 141 KIHRLPIVNQDRQVIGIVTRADVLRE 166



 Score = 39.5 bits (91), Expect = 0.69,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 24/45 (53%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                ++DA  ++ +K+   + +V++ +++ GI+T  D+ R    
Sbjct: 125 PSDKTVMDAAALMLKKKIHRLPIVNQDRQVIGIVTRADVLRELEA 169


>gi|157155435|ref|YP_001463156.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           E24377A]
 gi|157077465|gb|ABV17173.1| transcriptional regulator, rpiR family [Escherichia coli E24377A]
          Length = 289

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|16129806|ref|NP_416367.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|82543677|ref|YP_407624.1| DNA-binding transcriptional regulator HexR [Shigella boydii Sb227]
 gi|89108693|ref|AP_002473.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. W3110]
 gi|157161322|ref|YP_001458640.1| DNA-binding transcriptional regulator HexR [Escherichia coli HS]
 gi|170019802|ref|YP_001724756.1| DNA-binding transcriptional regulator HexR [Escherichia coli ATCC
           8739]
 gi|170081509|ref|YP_001730829.1| DNA-binding transcriptional regulator [Escherichia coli str. K-12
           substr. DH10B]
 gi|188494258|ref|ZP_03001528.1| transcriptional regulator, rpiR family [Escherichia coli 53638]
 gi|193066055|ref|ZP_03047112.1| transcriptional regulator, rpiR family [Escherichia coli E22]
 gi|194429654|ref|ZP_03062172.1| transcriptional regulator, rpiR family [Escherichia coli B171]
 gi|194439085|ref|ZP_03071168.1| transcriptional regulator, rpiR family [Escherichia coli 101-1]
 gi|218695419|ref|YP_002403086.1| DNA-binding transcriptional regulator HexR [Escherichia coli 55989]
 gi|238901068|ref|YP_002926864.1| putative DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|253773190|ref|YP_003036021.1| DNA-binding transcriptional regulator HexR [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|254161913|ref|YP_003045021.1| DNA-binding transcriptional regulator HexR [Escherichia coli B str.
           REL606]
 gi|256022481|ref|ZP_05436346.1| DNA-binding transcriptional regulator HexR [Escherichia sp.
           4_1_40B]
 gi|260844197|ref|YP_003221975.1| putative DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|300824205|ref|ZP_07104323.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|300928884|ref|ZP_07144389.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300951474|ref|ZP_07165309.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300956636|ref|ZP_07168914.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|301025451|ref|ZP_07188999.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|301645631|ref|ZP_07245560.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|307138515|ref|ZP_07497871.1| DNA-binding transcriptional regulator HexR [Escherichia coli H736]
 gi|307314067|ref|ZP_07593679.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|331642466|ref|ZP_08343601.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H736]
 gi|331668547|ref|ZP_08369395.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA271]
 gi|331677734|ref|ZP_08378409.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H591]
 gi|2507341|sp|P46118|HEXR_ECOLI RecName: Full=HTH-type transcriptional regulator hexR; AltName:
           Full=Hex regulon repressor
 gi|1736496|dbj|BAA15661.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K12 substr. W3110]
 gi|1788159|gb|AAC74923.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. MG1655]
 gi|81245088|gb|ABB65796.1| conserved hypothetical protein [Shigella boydii Sb227]
 gi|157067002|gb|ABV06257.1| transcriptional regulator, rpiR family [Escherichia coli HS]
 gi|169754730|gb|ACA77429.1| transcriptional regulator, RpiR family [Escherichia coli ATCC 8739]
 gi|169889344|gb|ACB03051.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           str. K-12 substr. DH10B]
 gi|188489457|gb|EDU64560.1| transcriptional regulator, rpiR family [Escherichia coli 53638]
 gi|192926292|gb|EDV80929.1| transcriptional regulator, rpiR family [Escherichia coli E22]
 gi|194412296|gb|EDX28600.1| transcriptional regulator, rpiR family [Escherichia coli B171]
 gi|194422044|gb|EDX38048.1| transcriptional regulator, rpiR family [Escherichia coli 101-1]
 gi|195182915|dbj|BAG66483.1| predicted protein [Escherichia coli O111:H-]
 gi|218352151|emb|CAU97890.1| putative DNA-binding transcriptional regulator [Escherichia coli
           55989]
 gi|238862313|gb|ACR64311.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BW2952]
 gi|242377574|emb|CAQ32329.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|253324234|gb|ACT28836.1| transcriptional regulator, RpiR family [Escherichia coli
           'BL21-Gold(DE3)pLysS AG']
 gi|253973814|gb|ACT39485.1| predicted DNA-binding transcriptional regulator [Escherichia coli B
           str. REL606]
 gi|253978008|gb|ACT43678.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           BL21(DE3)]
 gi|257759344|dbj|BAI30841.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           O103:H2 str. 12009]
 gi|260449024|gb|ACX39446.1| transcriptional regulator, RpiR family [Escherichia coli DH1]
 gi|299880071|gb|EFI88282.1| transcriptional regulator, RpiR family [Escherichia coli MS 196-1]
 gi|300316558|gb|EFJ66342.1| transcriptional regulator, RpiR family [Escherichia coli MS 175-1]
 gi|300449224|gb|EFK12844.1| transcriptional regulator, RpiR family [Escherichia coli MS 116-1]
 gi|300463112|gb|EFK26605.1| transcriptional regulator, RpiR family [Escherichia coli MS 187-1]
 gi|300523276|gb|EFK44345.1| transcriptional regulator, RpiR family [Escherichia coli MS 119-7]
 gi|301076163|gb|EFK90969.1| transcriptional regulator, RpiR family [Escherichia coli MS 146-1]
 gi|306906205|gb|EFN36722.1| transcriptional regulator, RpiR family [Escherichia coli W]
 gi|309702077|emb|CBJ01391.1| putative hex-regulon repressor (RpiR-family transcriptional
           regulator) [Escherichia coli ETEC H10407]
 gi|315061158|gb|ADT75485.1| predicted DNA-binding transcriptional regulator [Escherichia coli
           W]
 gi|315136497|dbj|BAJ43656.1| DNA-binding transcriptional regulator HexR [Escherichia coli DH1]
 gi|320177525|gb|EFW52519.1| Phosphogluconate repressor HexR, RpiR family [Shigella dysenteriae
           CDC 74-1112]
 gi|323158662|gb|EFZ44676.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           E128010]
 gi|323166591|gb|EFZ52351.1| helix-turn-helix domain, rpiR family protein [Shigella sonnei 53G]
 gi|323378265|gb|ADX50533.1| transcriptional regulator, RpiR family [Escherichia coli KO11]
 gi|323937111|gb|EGB33391.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli E1520]
 gi|323961908|gb|EGB57507.1| rpiR family protein Helix-turn-helix domain-containing protein
           [Escherichia coli H489]
 gi|331039264|gb|EGI11484.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H736]
 gi|331063741|gb|EGI35652.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli TA271]
 gi|331074194|gb|EGI45514.1| HTH-type transcriptional regulator HexR (Hex regulon repressor)
           [Escherichia coli H591]
 gi|332343579|gb|AEE56913.1| conserved hypothetical protein [Escherichia coli UMNK88]
          Length = 289

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|310826752|ref|YP_003959109.1| IMP dehydrogenase [Eubacterium limosum KIST612]
 gi|308738486|gb|ADO36146.1| IMP dehydrogenase [Eubacterium limosum KIST612]
          Length = 502

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 64/186 (34%), Gaps = 17/186 (9%)

Query: 154 CHADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             A++ L  P        ES  +   P TSAIMQ   G+ +AIAL      S   F    
Sbjct: 27  MPANVNLKTPVVKFKKGEESSIYMNIPMTSAIMQSVSGEKMAIALATEGGIS---FIYGS 83

Query: 209 PGGKLGTLFVCASDVMHSGDSIP--LVKIGCPLIDAITILSEKRFGCVAVVDE---GQKL 263
              +     +       +G       V     + D + +  +     VAV  +     K 
Sbjct: 84  QSVENEAAMIARVKAYKAGFVPSDSNVTPDATMQDILDLKEKTGHSTVAVTSDGTANGKF 143

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            GI+T  D      +   +  V++ M          E T L  A  ++  H ++ L +V 
Sbjct: 144 VGIVTSRDYR--VSRMDPSTKVKEFMTPLEKIIYAPEGTSLKEANNIIWDHKLNTLPIVA 201

Query: 322 DCQKAI 327
              + +
Sbjct: 202 ADGRLL 207


>gi|218886680|ref|YP_002436001.1| CBS domain containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
 gi|218757634|gb|ACL08533.1| CBS domain containing protein [Desulfovibrio vulgaris str.
           'Miyazaki F']
          Length = 217

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 16/127 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------ 279
               +  V     +  A  ++ E+    + VV E + L G++++ DI             
Sbjct: 7   MTTHVYTVTPDDSISYAAGMMRERNVKHLPVV-ENELLVGMLSDRDIKAYLPSKGTSLDI 65

Query: 280 ------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIV 330
                 L    V   M +    I  +T +  A  ++   +   L V +     Q+ +GI+
Sbjct: 66  YEINYLLAKTKVSQAMTRPVVSIPAETPIEDAAMIMHDRDFGCLPVTEAAHGGQRLVGII 125

Query: 331 HFLDLLR 337
              DL R
Sbjct: 126 SDNDLFR 132



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+D M  +   +  D  ++ A  ++R+ N+  L VV++    +G++   D+
Sbjct: 3   VKDWMTTHVYTVTPDDSISYAAGMMRERNVKHLPVVENE-LLVGMLSDRDI 52



 Score = 43.3 bits (101), Expect = 0.050,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 3/47 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNF 276
           +    P+ DA  I+ ++ FGC+ V +    GQ+L GII++ D+FR  
Sbjct: 88  IPAETPIEDAAMIMHDRDFGCLPVTEAAHGGQRLVGIISDNDLFRVM 134


>gi|242786825|ref|XP_002480882.1| IMP dehydrogenase, putative [Talaromyces stipitatus ATCC 10500]
 gi|218721029|gb|EED20448.1| IMP dehydrogenase, putative [Talaromyces stipitatus ATCC 10500]
          Length = 547

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 61/189 (32%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P          AP  S+ M       +AI +            V+H       
Sbjct: 69  SDVTLDTPVTKRISL--KAPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCSAED 121

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V            ++     + +A  + +   FG   V + G    KL GI+T
Sbjct: 122 QAEMVRKVKRYENGFILDPVVISPKTTVAEAKELKATWGFGGFPVTENGTLRSKLVGIVT 181

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +     +   V  VM  +       T L  A ++LR      L +VD     + 
Sbjct: 182 SRDIQFHTS---DADPVTKVMSTDLVTAPAGTTLAEANEVLRNSKKGKLPIVDKDGNLVS 238

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 239 LLSRSDLRK 247



 Score = 37.6 bits (86), Expect = 3.3,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VD+   L  +++  D+ +N H
Sbjct: 207 PAGTTLAEANEVLRNSKKGKLPIVDKDGNLVSLLSRSDLRKNLH 250


>gi|85541033|sp|Q57976|M556_METJA RecName: Full=Methylated protein MJ0556
          Length = 174

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 48/127 (37%), Gaps = 9/127 (7%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +     + +      + +    + +     + VVD+   + G IT  +I +     
Sbjct: 23  RVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIGFITLREIRKYMTSH 82

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNISVLMVVDDC------QKAIGIVH 331
              L+V +VM+KNP     D  +  A + + +    +  L V++         K  GI+ 
Sbjct: 83  PY-LNVGEVMLKNPPYTTADEDIITAFEKMIESNKKLDQLPVINTKYPEKILGKLEGIIF 141

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 142 MEDIIKL 148



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 3/70 (4%)

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + R  +K  +L  + V+DVMI    +I   +  +      + +HNIS + VVDD    IG
Sbjct: 9   LVRTLNKYKELQKIRVKDVMISGDVIITTPEKTIKEIFDEMIKHNISGMPVVDDRGVMIG 68

Query: 329 IVHFLDLLRF 338
            +   ++ ++
Sbjct: 69  FITLREIRKY 78


>gi|242371967|ref|ZP_04817541.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
 gi|242350330|gb|EES41931.1| RpiR family transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
          Length = 293

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/196 (19%), Positives = 72/196 (36%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K  +     L+ N       +      R   +L ++ +           +  K  +  + 
Sbjct: 80  KEASVYNVELVDNENTDSLKK--KMHSRAKGALNNANEKIDDKIIDQICDLFKQAET-IF 136

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     V         L      D ++ ++ +G   E++
Sbjct: 137 IYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSEMR 196

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP++ ITS + + VA  +DI+L+   + +     +  TTS   Q+   D 
Sbjct: 197 SIAKVVSDYHIPVVTITSTSDNPVAKRSDIILSYG-QTDENEMRMGATTSLFAQMFTIDV 255

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 256 LYYRYIALNYQSSLDF 271


>gi|229529181|ref|ZP_04418571.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           12129(1)]
 gi|229332955|gb|EEN98441.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           12129(1)]
          Length = 276

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 59/172 (34%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 70  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 122

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 123 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 181

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+   +  A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 182 SGSTKEVVHAVTQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 233


>gi|152988125|ref|YP_001351538.1| putative transcriptional regulator [Pseudomonas aeruginosa PA7]
 gi|150963283|gb|ABR85308.1| probable transcriptional regulator [Pseudomonas aeruginosa PA7]
          Length = 293

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/179 (18%), Positives = 58/179 (32%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S    +L+        L  +   L          A+  I   + RV   G G SG + 
Sbjct: 88  SDSVADFSLKIFDTTLHSLMEVREHLDT---HALERAIAAIAHAQ-RVEFYGFGASGAVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           +            +               +   D+ I +S SG S +L       R    
Sbjct: 144 ADAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPSDVAICISQSGRSKDLLITANLVREAGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LI +       +A  A + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 204 TLITLCPSQT-PLADLATVNLAIDVHEDTDIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|319939306|ref|ZP_08013667.1| transcriptional regulator [Streptococcus anginosus 1_2_62CV]
 gi|319811560|gb|EFW07844.1| transcriptional regulator [Streptococcus anginosus 1_2_62CV]
          Length = 209

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKD 279
             V     S  LV     + DAI  L       + V+DE ++L GI++  D+ R   + +
Sbjct: 75  KKVEDVMTSPVLVTHDSFIQDAIITLFMYDSDVLYVIDEKKQLLGILSRKDLLRAALNAN 134

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVH 331
           ++   V   M + P  K   +D  +  A  LL+   I  L VV++      IG + 
Sbjct: 135 IDVTPVAVCMTRMPHIKTCHKDLNILEAAALLQDFAIDSLPVVEEQNEGHIIGTIT 190



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     VEDVM  +P ++  D+ +  A+  L  ++  VL V+D+ ++ +GI+
Sbjct: 63  DLETLFFFDTFQKKVEDVMT-SPVLVTHDSFIQDAIITLFMYDSDVLYVIDEKKQLLGIL 121

Query: 331 HFLDLLRFGI 340
              DLLR  +
Sbjct: 122 SRKDLLRAAL 131


>gi|296504791|ref|YP_003666491.1| CBS domain-containing protein [Bacillus thuringiensis BMB171]
 gi|296325843|gb|ADH08771.1| CBS domain-containing protein [Bacillus thuringiensis BMB171]
          Length = 163

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 14  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 73

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 74  VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 132

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 133 VVKDTKQGLEVIGRITKTNITRA 155


>gi|29375158|ref|NP_814311.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis V583]
 gi|255973622|ref|ZP_05424208.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis T2]
 gi|256964662|ref|ZP_05568833.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis HIP11704]
 gi|257085900|ref|ZP_05580261.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis D6]
 gi|21693323|gb|AAM75270.1|AF454824_65 EF0065 [Enterococcus faecalis]
 gi|29342617|gb|AAO80382.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis V583]
 gi|255966494|gb|EET97116.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis T2]
 gi|256955158|gb|EEU71790.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis HIP11704]
 gi|256993930|gb|EEU81232.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis D6]
          Length = 272

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 109 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 167

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 168 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 224

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 225 LNGGSLAGKISQLYICDLLV 244


>gi|83745976|ref|ZP_00943032.1| Transporter [Ralstonia solanacearum UW551]
 gi|83727370|gb|EAP74492.1| Transporter [Ralstonia solanacearum UW551]
          Length = 440

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP---LVKIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P    V     +  A+ +L      
Sbjct: 270 WLDIDPEDLTALLQEMQQQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVK 329

Query: 253 CVAVVDEGQKLKGIITEGD------------IFRNFHKDLNTLS-VEDVMIKNPKVILED 299
            + V+D+G++L GI+T  D            +   F     T   V  VM      I  D
Sbjct: 330 SLPVLDDGRRLIGIVTRADLTGTAARAPRQRLRDWFAIGAMTPPRVSGVMTPRVLTIRAD 389

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + L        + VVD   +  GI+   D++  
Sbjct: 390 APMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHA 428



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ DI    ++
Sbjct: 386 IRADAPMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHALYR 431


>gi|170758633|ref|YP_001787804.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A3 str. Loch Maree]
 gi|169405622|gb|ACA54033.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A3 str. Loch Maree]
          Length = 584

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++  ++    + +
Sbjct: 15  MKTDFIKVFKNEAISSAFNKMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENQGKEFSDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +ED + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LEDYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNKKIIGIVHLDDL 124


>gi|150401158|ref|YP_001324924.1| signal transduction protein [Methanococcus aeolicus Nankai-3]
 gi|150013861|gb|ABR56312.1| putative signal transduction protein with CBS domains
           [Methanococcus aeolicus Nankai-3]
          Length = 132

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 56/119 (47%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
              ++  +   C L +A  ++  K    + V D   K+ G+++ GDI     K+ N L  
Sbjct: 7   MNPTVYKLSETCTLAEAFNMMQNKGIKRIFVEDFNNKIVGVLSYGDIAEAIVKNSNELLD 66

Query: 284 ----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +++++ +K    I E+  +    +++    +S L+V+DD    +G +   D+LR+
Sbjct: 67  IMANNIKNISLKEVLTINENHDIKEGAKIMVHAGVSALLVIDDNNNFVGTISQTDILRY 125



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 25/56 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++++M      + E   L  A  +++   I  + V D   K +G++ + D+   
Sbjct: 1   MKIKEIMNPTVYKLSETCTLAEAFNMMQNKGIKRIFVEDFNNKIVGVLSYGDIAEA 56


>gi|328951034|ref|YP_004368369.1| magnesium transporter [Marinithermus hydrothermalis DSM 14884]
 gi|328451358|gb|AEB12259.1| magnesium transporter [Marinithermus hydrothermalis DSM 14884]
          Length = 452

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V+    + + +  L            + V+D+ ++L G+++  D+     +      V++
Sbjct: 149 VRASMTVEEVLRFLRRTAPDAETVYYLYVIDDERRLVGVLSLRDLIVADPR----TRVQE 204

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M  +   I  DT      +L+  ++ SVL VVDD  + +GIV   D+L
Sbjct: 205 IMRPDVVHITTDTDQEEVARLMADYDFSVLPVVDDAGRLVGIVTVDDVL 253



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 23/62 (37%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       +  +       +   ++++  F  + VVD+  +L GI+T  D+     
Sbjct: 198 PRTRVQEIMRPDVVHITTDTDQEEVARLMADYDFSVLPVVDDAGRLVGIVTVDDVLDVLE 257

Query: 278 KD 279
           ++
Sbjct: 258 EE 259


>gi|315221358|ref|ZP_07863279.1| CBS domain pair protein [Streptococcus anginosus F0211]
 gi|315189477|gb|EFU23171.1| CBS domain pair protein [Streptococcus anginosus F0211]
          Length = 209

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 49/116 (42%), Gaps = 5/116 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKD 279
             V     S  LV     + DAI  L       + V+DE ++L GI++  D+ R   + +
Sbjct: 75  KKVEDVMTSPVLVTHDSFIQDAIITLFMYDADVLYVIDEKKQLLGILSRKDLLRAALNAN 134

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVH 331
           ++   V   M + P  K   +D  +  A  LL+   I  L VV++      IG + 
Sbjct: 135 IDVTPVAVCMTRMPHIKTCHKDLNILEAAALLQDFAIDSLPVVEEQNEGHIIGTIT 190



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     VEDVM  +P ++  D+ +  A+  L  ++  VL V+D+ ++ +GI+
Sbjct: 63  DLETLFFFDTFQKKVEDVMT-SPVLVTHDSFIQDAIITLFMYDADVLYVIDEKKQLLGIL 121

Query: 331 HFLDLLRFGI 340
              DLLR  +
Sbjct: 122 SRKDLLRAAL 131


>gi|187932328|ref|YP_001887113.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Clostridium botulinum B str. Eklund 17B]
 gi|187720481|gb|ACD21702.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum B str. Eklund 17B]
          Length = 375

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D+         L+  +  +   +   + V+D+   L GI+T   I  N  +   +++V
Sbjct: 254 MIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVTAKQIQNNTDR---SVAV 310

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E++M  +      D  +   ++L++++ IS L VVD+     GI+ 
Sbjct: 311 ENIMNSDFIKASPDDTIIDILELVKENKISRLPVVDEGGCLRGIIT 356



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 25/48 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V+D+MI NP    ++  L   ++ +R   +  LMV+D     +GIV 
Sbjct: 249 KVKDIMIDNPITCYKNISLLKCVEKMRSSKVDSLMVIDKLNHLLGIVT 296



 Score = 36.0 bits (82), Expect = 9.5,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 23/50 (46%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                +ID + ++ E +   + VVDEG  L+GIIT+  +     +     
Sbjct: 322 SPDDTIIDILELVKENKISRLPVVDEGGCLRGIITKSSLVTTLSQQFLDT 371


>gi|161528812|ref|YP_001582638.1| signal-transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160340113|gb|ABX13200.1| putative signal-transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 148

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 6/122 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLI--DAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNF 276
             ++    S  ++ +   +   DA  ++ +   G +AV+ E     GI+T+ D  I    
Sbjct: 25  KTLVKEIMSNSVISVDSSITATDAAKMMEDTGVGAIAVL-ENGSPVGIVTDRDFAIKITA 83

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           H       +  +M      I  ++ L  A  L+   N+  L V+DD  + IGI+   DL+
Sbjct: 84  HSYPIDTPIRRIMSAPLISIDPNSDLWTASDLMTTRNVRKLPVIDDD-RIIGILTSSDLV 142

Query: 337 RF 338
           ++
Sbjct: 143 KY 144


>gi|149191518|ref|ZP_01869766.1| DNA-binding transcriptional regulator HexR [Vibrio shilonii AK1]
 gi|148834643|gb|EDL51632.1| DNA-binding transcriptional regulator HexR [Vibrio shilonii AK1]
          Length = 284

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/147 (19%), Positives = 60/147 (40%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 + 
Sbjct: 117 QINRAVDLLTQAK-RISFFGLGASSSVARDAQNKFIRFNIPISCYEDVVMQRMSCINCSD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I + AR     +IA+T++  S +   + + +T+    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIAHLARENGATVIAVTAK-DSPLDKASSLSITVDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ I D LA      R 
Sbjct: 235 --MPMASRVVQMTIIDVLATGFTLRRG 259


>gi|21222701|ref|NP_628480.1| transcriptional regulator [Streptomyces coelicolor A3(2)]
 gi|256786225|ref|ZP_05524656.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|289770116|ref|ZP_06529494.1| transcriptional regulator [Streptomyces lividans TK24]
 gi|8248807|emb|CAB93068.1| putative transcriptional regulator [Streptomyces coelicolor A3(2)]
 gi|289700315|gb|EFD67744.1| transcriptional regulator [Streptomyces lividans TK24]
          Length = 320

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R  + GIG S  +   L   +   G  +        +  +   +   D+ + ++ SGS+ 
Sbjct: 159 RTDVYGIGASNLVAQDLTQKMLRIGLIAHAPGDPHLAVTNAVQLRAGDVALAITHSGSTG 218

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT    S V  +AD VLT     ES     A  +S   QL +
Sbjct: 219 DVIEPLRVAFERGATTIAITGRPDSPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 277

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 278 VDCLFVGVAQR 288


>gi|295101064|emb|CBK98609.1| Transcriptional regulators [Faecalibacterium prausnitzii L2-6]
          Length = 281

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/147 (19%), Positives = 60/147 (40%), Gaps = 1/147 (0%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R L+++  +     +     AV  ++  + +V   G G S  + + + +  AS  T   
Sbjct: 102 ARFLTAINGTQNALSTEAVDEAVHLMQEAR-QVFCLGQGGSMLLANDICARFASLSTKFR 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
               +        ++   D+++ +S+SG++ ++   L  A+     +I +T    S  A 
Sbjct: 161 TAGDSHLQLLTASLMNEADVVLFVSYSGATRDMMETLRTAKAAGAKIILLTHYEDSPGAL 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIM 181
            AD+VL    +      G  P  +A +
Sbjct: 221 LADVVLLCGAQESPLDSGSIPIKAAFL 247


>gi|260588074|ref|ZP_05853987.1| transcriptional regulator, RpiR family [Blautia hansenii DSM 20583]
 gi|260541601|gb|EEX22170.1| transcriptional regulator, RpiR family [Blautia hansenii DSM 20583]
          Length = 297

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 69/171 (40%), Gaps = 7/171 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +    E   L   +  L   +    +   + +   + R+ + G G S          L  
Sbjct: 115 KIFAIESSALEQTKQELDISV---MNKVADVLLKAR-RINLVGTGGSAISARDFQHKLLK 170

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +      +       ++T +D++  +S SGS+  +   +  A++ +  +I +T ++
Sbjct: 171 IGVRAELQEDKDLQLMSASLLTEEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKS 230

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           K+++   AD    L    E         ++ + QLA+ D L +AL+  +NF
Sbjct: 231 KNILVEKADY--PLYVVSEKTIFESESFSARLAQLAMLDCL-VALMAFKNF 278


>gi|224476200|ref|YP_002633806.1| putative hexose phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222420807|emb|CAL27621.1| putative hexose phosphate isomerase [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 181

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/167 (23%), Positives = 71/167 (42%), Gaps = 7/167 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+++L    S +      +++  K  +     G+SG++ +  A  L   G  S  + 
Sbjct: 10  LDELKNTLGHVKSEEVEQFENEVRDAKN-IFTASKGRSGYVSNSFAMRLNQLGKASHVIG 68

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A         I + DL IV+S SGS++ L+ +   A+     ++ IT++  S +   AD
Sbjct: 69  GASTP-----SIHKGDLFIVISGSGSTEHLRLLADKAKGEDAKVVLITTKPDSKIGEIAD 123

Query: 158 IVLTLPKEPESCPHGL-APTTSAIMQLAIGDALAIALLESRNFSEND 203
            V+ LP   +    G   P  S   Q A     A+ L     F+ ++
Sbjct: 124 TVIELPAGTKFDAEGSEQPLGSLFEQSAQIFLDAVVLDLMEIFNIDE 170


>gi|242279278|ref|YP_002991407.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
 gi|242122172|gb|ACS79868.1| CBS domain containing membrane protein [Desulfovibrio salexigens
           DSM 2638]
          Length = 145

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 49/117 (41%), Gaps = 12/117 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---------- 283
                L  A +++  +R   + +V++ ++  G++T  DI R     L  +          
Sbjct: 16  SESDNLKMARSLMDLQRIRHIPIVNDEREFIGLVTHRDILRATISQLADIDPATQGEIDS 75

Query: 284 --SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V ++M  + K I EDT L  A  LL  H      VV++    IGI+   D L+ 
Sbjct: 76  GIPVGEIMRTDIKTISEDTSLKEAAVLLLDHKYGCFPVVNEKNGLIGILTEADFLKL 132



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 17/56 (30%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L V D+M      + E   L +A  L+    I  + +V+D ++ IG+V   D+LR 
Sbjct: 2   LKVNDLMTTELFTLSESDNLKMARSLMDLQRIRHIPIVNDEREFIGLVTHRDILRA 57



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 15/49 (30%), Positives = 24/49 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               I  +     L +A  +L + ++GC  VV+E   L GI+TE D  +
Sbjct: 83  MRTDIKTISEDTSLKEAAVLLLDHKYGCFPVVNEKNGLIGILTEADFLK 131


>gi|210621820|ref|ZP_03292849.1| hypothetical protein CLOHIR_00794 [Clostridium hiranonis DSM 13275]
 gi|210154584|gb|EEA85590.1| hypothetical protein CLOHIR_00794 [Clostridium hiranonis DSM 13275]
          Length = 590

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +     +  A++ + +     +  +D+   + GII+  DI      ++ +  + ++D+M 
Sbjct: 28  INENESVKIAVSEIIKANKKTLVALDDNGDMSGIISITDIHNLGLNNEGIEDVKIKDIMK 87

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV---HFLDLL 336
           K    + +   +     L+ + NI +L VVDD  K  GI+   H  D L
Sbjct: 88  KKVVSVEKGMPIDECRDLMIKENIGILPVVDDNGKITGILRQEHIRDYL 136



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 2/59 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             VEDVM  N   I E+  + +A+ ++++ +    L+ +DD     GI+   D+   G+
Sbjct: 15  KKVEDVMDLNFNTINENESVKIAVSEIIKANK-KTLVALDDNGDMSGIISITDIHNLGL 72



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 25/63 (39%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G                  +  V+ G P+ +   ++ ++  G + VVD+  K+ GI+ + 
Sbjct: 71  GLNNEGIEDVKIKDIMKKKVVSVEKGMPIDECRDLMIKENIGILPVVDDNGKITGILRQE 130

Query: 271 DIF 273
            I 
Sbjct: 131 HIR 133


>gi|157372893|ref|YP_001480882.1| RpiR family transcriptional regulator [Serratia proteamaculans 568]
 gi|157324657|gb|ABV43754.1| transcriptional regulator, RpiR family [Serratia proteamaculans
           568]
          Length = 278

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L        S Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLA---MQTSSEQLDRAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+  +D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFTEQLSMVKPNDVVIAISYSPYAQEALELVELGAKNGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|322381963|ref|ZP_08055913.1| hypothetical protein PL1_0734 [Paenibacillus larvae subsp. larvae
           B-3650]
 gi|321154103|gb|EFX46431.1| hypothetical protein PL1_0734 [Paenibacillus larvae subsp. larvae
           B-3650]
          Length = 417

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   ++ +       V+D  QK  G+IT  DI       L    +  +M  NP 
Sbjct: 188 EDQTVKDMQKLVRKTTHTRYPVLDADQKPVGVITTKDIIGAKPGQL----ISSLMTANPL 243

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VI     +  A   +    I +L V+D  +K IG++   D+L+ 
Sbjct: 244 VISSKASVASAGHTMIWEGIELLPVIDGERKMIGVISRKDVLKA 287



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 15/71 (21%), Positives = 32/71 (45%), Gaps = 3/71 (4%)

Query: 272 IFRNFHKDLNTLSV---EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           I R     L    +   ED++ ++   + ED  +    +L+R+   +   V+D  QK +G
Sbjct: 159 INRAIEDRLIKKKIMLAEDILCRDVYSLTEDQTVKDMQKLVRKTTHTRYPVLDADQKPVG 218

Query: 329 IVHFLDLLRFG 339
           ++   D++   
Sbjct: 219 VITTKDIIGAK 229


>gi|315146280|gb|EFT90296.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX4244]
          Length = 285

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGRSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|270262213|ref|ZP_06190485.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
 gi|270044089|gb|EFA17181.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
          Length = 296

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 64/169 (37%), Gaps = 5/169 (2%)

Query: 36  RGLSSLESSLQGELS-FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
             + +   +++  L     + AV+ +   K ++   G+G S  +     +       P  
Sbjct: 106 ESVMACLDTVKANLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVV 164

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +              +  D+++++S +G +  L  +   AR     +IAITS   + +A 
Sbjct: 165 YFDDIVMQRMGCMNSSEGDVVVLISHTGRTKNLVEMAQLARENDATVIAITSR-DTPLAH 223

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            A + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 224 AATLSLLLDVPEDTDVY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 270


>gi|169334239|ref|ZP_02861432.1| hypothetical protein ANASTE_00637 [Anaerofustis stercorihominis DSM
           17244]
 gi|169258956|gb|EDS72922.1| hypothetical protein ANASTE_00637 [Anaerofustis stercorihominis DSM
           17244]
          Length = 181

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 64/162 (39%), Gaps = 12/162 (7%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              L  L   +  E   +F   +E       R+  +G+G+SG +    A  L   G  ++
Sbjct: 8   ANELVELMDKVSDEQIEKFEEVLE----GANRIFTSGMGRSGFMMRGFAMRLMHMGYKTY 63

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            I   DL+++ S SG +  L A+   A+     +  I+S +K  +A 
Sbjct: 64  VVGETTTP-----AILEGDLLVLGSGSGKTSGLVAMAKKAKEMGAKIALISSNDKDGIAE 118

Query: 155 HADIVLTLPKEPESCPH---GLAPTTSAIMQLAIGDALAIAL 193
            AD+V+T+  + +        + P  +   Q  +    ++ L
Sbjct: 119 LADVVITVGAQTKDKSDSGSSIQPMGTLFEQGLLLVCDSVIL 160


>gi|54309682|ref|YP_130702.1| hypothetical protein PBPRA2518 [Photobacterium profundum SS9]
 gi|46914120|emb|CAG20900.1| conserved hypothetical protein [Photobacterium profundum SS9]
          Length = 629

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 51/123 (41%), Gaps = 12/123 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
               P V     +  A   ++++    + ++D         +   + GIIT+ D+  R  
Sbjct: 157 TRDAPFVYKNESIQQAAIKMADESVSSLLIIDPDILDDNENDTSSVIGIITDRDLCTRVL 216

Query: 277 HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              ++   +VE VM      +  +  +  AM  + + N+  L +    +K IGI+   D+
Sbjct: 217 ASGIDPNDTVESVMTNEVISLDHNAYVYEAMLTMLRFNVHHLPIF-KDKKPIGIIETTDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278


>gi|255076405|ref|XP_002501877.1| predicted protein [Micromonas sp. RCC299]
 gi|226517141|gb|ACO63135.1| predicted protein [Micromonas sp. RCC299]
          Length = 168

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 46/131 (35%), Gaps = 19/131 (14%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRN 275
               +  M              L   +  L  ++ GCV VVD   +K  GIIT+ D+ R 
Sbjct: 1   MPSVASFMMPACKCVTACPEDKLRSVVDSLVNEKIGCVVVVDTLSRKAVGIITKQDVNRY 60

Query: 276 FHKDLN------------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           F  + +                     V +VM  N      D     A +LL++  I   
Sbjct: 61  FLSEFSEEFFQFVSSRATPPQIPLDTPVSEVMSTNLHPARPDMHRDDAAELLQREKIHHA 120

Query: 318 MVVDDCQKAIG 328
           +VV +  K +G
Sbjct: 121 IVVGEDGKFVG 131


>gi|89899925|ref|YP_522396.1| RpiR family transcriptional regulator [Rhodoferax ferrireducens
           T118]
 gi|89344662|gb|ABD68865.1| transcriptional regulator, RpiR family [Rhodoferax ferrireducens
           T118]
          Length = 282

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/169 (17%), Positives = 57/169 (33%), Gaps = 20/169 (11%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           ++  EK  ++ +++  QG+                 R+   G+G SG +           
Sbjct: 113 TVAIEKAAITLVQAYEQGK-----------------RIEFFGVGNSGIVAQDAQHKFFRL 155

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  +              ++   D ++++S SG + +L      AR+     I IT+   
Sbjct: 156 GINTVAYSDGHMQVMGATLLGPGDCVVIISNSGRTRDLMDACDIARKNGATTIVITASGS 215

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + A     +     E        +P  S ++ L I D LA  +     
Sbjct: 216 PLAAAGHLHLAADHPEGFDRY---SPMVSRLLHLMIIDILATCVALRIG 261


>gi|330807940|ref|YP_004352402.1| transcription factor, HexR [Pseudomonas brassicacearum subsp.
           brassicacearum NFM421]
 gi|327376048|gb|AEA67398.1| Putative Transcription factor, HexR [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
          Length = 289

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 37/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQALDPNLISRAVDLLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+E  
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARENGASVLGLTAEG- 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAKASTLSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|218783041|ref|YP_002434359.1| polynucleotide adenylyltransferase region [Desulfatibacillum
           alkenivorans AK-01]
 gi|218764425|gb|ACL06891.1| Polynucleotide adenylyltransferase region [Desulfatibacillum
           alkenivorans AK-01]
          Length = 896

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 50/106 (47%), Gaps = 6/106 (5%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDE-----GQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
              +  A  +L++     + + D       ++L+G I+   + +  H +L+ + V + M 
Sbjct: 337 DVSIKKAAALLTQYNINALLITDPPDEEGNKQLRGFISRQVVEKAMHHNLSEVPVLEYMT 396

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +P  + +D  L    +L+ ++   +L V+DD    +G++   DLL
Sbjct: 397 SDPMTVPKDADLQAIQKLVIENKQRILPVMDD-GHIVGVITRTDLL 441


>gi|91223851|ref|ZP_01259115.1| hypothetical protein V12G01_18942 [Vibrio alginolyticus 12G01]
 gi|91191343|gb|EAS77608.1| hypothetical protein V12G01_18942 [Vibrio alginolyticus 12G01]
          Length = 626

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 57/115 (49%), Gaps = 11/115 (9%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQ--------KLKGIITEGDI-FRNFHKDLNT-L 283
           +    + +A  +++E+    + ++   +        +L GI+T+ D+  R   + ++T +
Sbjct: 164 EATASIQEAAILMAEENVTSLLIIRPTEELTEEDDEQLLGILTDRDLCIRVLAQGIDTNI 223

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V +VM  +   +  +  +  AM  + ++N+  L ++   +K IGI+   D++R+
Sbjct: 224 PVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPIL-KDKKPIGIIGMTDIVRY 277



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 32/70 (45%), Gaps = 8/70 (11%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--------DDCQK 325
           R+   D  T     ++ ++P  +     +  A  L+ + N++ L+++        +D ++
Sbjct: 141 RSESNDFTTAKARKILARDPVTLEATASIQEAAILMAEENVTSLLIIRPTEELTEEDDEQ 200

Query: 326 AIGIVHFLDL 335
            +GI+   DL
Sbjct: 201 LLGILTDRDL 210


>gi|256617467|ref|ZP_05474313.1| helix-turn-helix protein RpiR [Enterococcus faecalis ATCC 4200]
 gi|256957579|ref|ZP_05561750.1| helix-turn-helix protein RpiR [Enterococcus faecalis DS5]
 gi|257077494|ref|ZP_05571855.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis JH1]
 gi|257089018|ref|ZP_05583379.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis CH188]
 gi|257420824|ref|ZP_05597814.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|256596994|gb|EEU16170.1| helix-turn-helix protein RpiR [Enterococcus faecalis ATCC 4200]
 gi|256948075|gb|EEU64707.1| helix-turn-helix protein RpiR [Enterococcus faecalis DS5]
 gi|256985524|gb|EEU72826.1| helix-turn-helix protein RpiR:Sugar isomerase [Enterococcus
           faecalis JH1]
 gi|256997830|gb|EEU84350.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis CH188]
 gi|257162648|gb|EEU92608.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|323479718|gb|ADX79157.1| helix-turn-helix domain, rpiR family protein [Enterococcus faecalis
           62]
          Length = 272

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 109 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 167

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 168 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 224

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 225 LNGGSLAGKISQLYICDLLV 244


>gi|226357245|ref|YP_002786985.1| hypothetical protein [Deinococcus deserti VCD115]
 gi|226319235|gb|ACO47231.1| putative CBS domain protein [Deinococcus deserti VCD115]
          Length = 139

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 45/105 (42%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V     L +  T++ ++  G V ++ EG  L+GIIT+ DI  R      +      D   
Sbjct: 15  VDSQATLKEVATLMRDQDIGNVLIM-EGDTLRGIITDRDIVVRAVAYGHDFGTPASDYAT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   +   T +  A Q + +  +  L V  +  K +GIV   DL
Sbjct: 74  GSVFTMEASTDVREAAQAMAERQLRRLPVT-EGGKVVGIVSLGDL 117


>gi|222479327|ref|YP_002565564.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222452229|gb|ACM56494.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 124

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 48/124 (38%), Gaps = 7/124 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             L             +  +    PL +A   +S+     + V   G     I+T+ DI 
Sbjct: 1   MDLNDRTRVSEVMSTPLETIGANEPLREAARRMSDSDISALVVTTGGGC---IVTQSDIV 57

Query: 274 RNFHK--DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
               +  D    +V DVM +N + +  D ++     ++  + +  L VVDD    +G+V 
Sbjct: 58  GAVAEGEDTTETTVRDVMTRNVETVTPDLMMEEVAAMMTMYGVKHLPVVDDD--YVGMVS 115

Query: 332 FLDL 335
             D+
Sbjct: 116 STDI 119


>gi|315167707|gb|EFU11724.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX1341]
          Length = 285

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLTKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DSDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|312883555|ref|ZP_07743280.1| DNA-binding transcriptional regulator HexR [Vibrio caribbenthicus
           ATCC BAA-2122]
 gi|309368778|gb|EFP96305.1| DNA-binding transcriptional regulator HexR [Vibrio caribbenthicus
           ATCC BAA-2122]
          Length = 284

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/147 (20%), Positives = 58/147 (39%), Gaps = 4/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 117 QINRAVDLLTQAK-RISFFGLGASSAVAKDAQNKFIRFNIPITCFEDIVMQRMSCINCTD 175

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  + +     + +TL    ++  +
Sbjct: 176 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DTPLDKACSLSITLDVPEDTDVY 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
              P  S ++Q+ + D LA      R 
Sbjct: 235 --MPMASRVVQMTVIDVLATGFTLRRG 259


>gi|294498622|ref|YP_003562322.1| CBS domain-containing protein [Bacillus megaterium QM B1551]
 gi|294348559|gb|ADE68888.1| CBS domain protein [Bacillus megaterium QM B1551]
          Length = 140

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
                P+  A  ++ +   G V V  E  ++ G+IT+ DI        KD NT+   D M
Sbjct: 15  CAPHDPVTAAAKLMRDINCGSVPVCQEN-RVMGMITDRDIVLNCVADGKDCNTVHCHDCM 73

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K+      DT +    +++  H I  ++VV++    +GI    DL
Sbjct: 74  TKDVITCSPDTDIHECARMMADHQIRRIIVVENNNM-VGICAIGDL 118



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V +VM K+ K       +T A +L+R  N   + V     + +G++   D++
Sbjct: 2   TTVREVMTKDVKACAPHDPVTAAAKLMRDINCGSVPVC-QENRVMGMITDRDIV 54


>gi|268326123|emb|CBH39711.1| conserved hypothetical protein, containing CBS domain [uncultured
           archaeon]
 gi|268326283|emb|CBH39871.1| hypothetical protein, containing CBS domain pair [uncultured
           archaeon]
          Length = 260

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKN 292
              +I   +I+ E   G V +  E  K  GIITE DI       +K  + +  ++VM   
Sbjct: 17  DTGIIKIASIMEELGVGSVVITAES-KPAGIITERDIALKVLLKNKLASEVKAKEVMTSP 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  DT +  A +L  +  I  L VVD+    IG+V   ++L
Sbjct: 76  LITVESDTSVEEASKLAAKSGIKRLPVVDN-GVLIGVVSVRNIL 118


>gi|254470144|ref|ZP_05083548.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
 gi|211960455|gb|EEA95651.1| inosine-5-monophosphate dehydrogenase [Pseudovibrio sp. JE062]
          Length = 143

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPK 294
            L +    L  +R G + + DE   + GI++E D+ +       D+    V + M K   
Sbjct: 22  SLSEICASLGGRRIGAIVLCDEPGVIVGIVSERDVVQAIAMEGPDVLAQPVSEYMTKEVA 81

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V  E   +   M  + +     + VV +  K IG+V   D+++F I
Sbjct: 82  VCTEADSVNGVMARMTEGRFRHMPVV-EDGKLIGLVSIGDIVKFRI 126



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +    + +      +   +  ++E RF  + VV E  KL G+++ GDI +
Sbjct: 75  YMTKEVAVCTEADSVNGVMARMTEGRFRHMPVV-EDGKLIGLVSIGDIVK 123


>gi|119489664|ref|ZP_01622423.1| hypothetical protein L8106_13105 [Lyngbya sp. PCC 8106]
 gi|119454401|gb|EAW35550.1| hypothetical protein L8106_13105 [Lyngbya sp. PCC 8106]
          Length = 205

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/118 (23%), Positives = 52/118 (44%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDI---FRNFHKDLN 281
               +  ++    + +A+  ++EK    + V     Q   GI+TE DI      F KD  
Sbjct: 9   MTTDVVTIRGSATVAEAVKKMNEKGRRALIVERRHEQDAYGIVTETDIIYKVAAFGKDPK 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            + V ++M K   V+  D  +    +L  Q +I +  V+   +  +GI+   D+L+ G
Sbjct: 69  QMRVYEIMTKPCIVVNPDLGVEYVARLFAQTHIHLAPVI--QETLMGIISIGDILKKG 124



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L  +D+M  +   I     +  A++ + +     L+V     Q A GIV   D++
Sbjct: 3   LKAKDIMTTDVVTIRGSATVAEAVKKMNEKGRRALIVERRHEQDAYGIVTETDII 57


>gi|24212997|ref|NP_710478.1| CBS-domain-containing membrane protein [Leptospira interrogans
           serovar Lai str. 56601]
 gi|24193678|gb|AAN47496.1| CBS-domain-containing membrane protein [Leptospira interrogans
           serovar Lai str. 56601]
          Length = 206

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
              P+  A  I  +KRF  V V+++   L GI+++ D  R    H    T ++ ++M   
Sbjct: 90  EDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMRWRLEHNPDTTQTIGEIMKTK 149

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     +    ++L +  I  L +++D  + IGI+   D+LR 
Sbjct: 150 ILSVQIHARILEISKILFEERIGCLPIINDKIEVIGIITRSDILRA 195



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+TL  +D+M       LED  +  A ++  Q     + V++      GI+   D +R
Sbjct: 72  LSTLMAKDLMTSPVVSFLEDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMR 129



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 16/46 (34%), Positives = 28/46 (60%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V+I   +++   IL E+R GC+ ++++  ++ GIIT  DI R   K
Sbjct: 153 VQIHARILEISKILFEERIGCLPIINDKIEVIGIITRSDILRAILK 198


>gi|256391398|ref|YP_003112962.1| inosine 5-monophosphate dehydrogenase [Catenulispora acidiphila DSM
           44928]
 gi|256357624|gb|ACU71121.1| IMP dehydrogenase family protein [Catenulispora acidiphila DSM
           44928]
          Length = 487

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 11/172 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P   A M    G  +A  +      +    D     P   +  + 
Sbjct: 40  LAVDLSSADGTGTTIPLVVANMTAVAGRRMAETIARRGGLAIIPQDI----PLDVVSDVI 95

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
               D     D+   +     + DA+ +L ++  G + V D   +  GIITE D      
Sbjct: 96  GWVKDRSPVYDTPVTLAPTSTVGDALALLPKRSHGALVVQDGDGRPVGIITEADC----S 151

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 +V D+M ++   I + T    A   L   +  +  VVDD  +  G+
Sbjct: 152 GVDRFTNVGDIMSRDVLTIPDGTSAEAAFDALDGKH-RLAPVVDDTGRLKGL 202



 Score = 39.9 bits (92), Expect = 0.61,   Method: Composition-based stats.
 Identities = 10/43 (23%), Positives = 20/43 (46%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +   + +  A+ LL + +   L+V D   + +GI+   D 
Sbjct: 108 PVTLAPTSTVGDALALLPKRSHGALVVQDGDGRPVGIITEADC 150


>gi|119498329|ref|XP_001265922.1| IMP dehydrogenase, putative [Neosartorya fischeri NRRL 181]
 gi|119414086|gb|EAW24025.1| IMP dehydrogenase, putative [Neosartorya fischeri NRRL 181]
          Length = 546

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D+ L  P           P  S+ M       +AI +       +   N S  D     
Sbjct: 68  SDVTLDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLGVIHHNCSPEDQA--- 122

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                  +        +     P+V      + +A  + ++  FG   V + G    KL 
Sbjct: 123 ------EMVRKVKRYENGFILDPVVLSPKATVGEAKELKAKWGFGGFPVTENGTLRSKLV 176

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G++T  DI   FH +LN   V  +M  +       T L  A  +LR      L +VD   
Sbjct: 177 GMVTSRDI--QFHTNLND-PVTAIMSTDLVTAPAGTTLAEANNVLRSSKKGKLPIVDANG 233

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 234 NLVSLLSRSDLMK 246


>gi|118576102|ref|YP_875845.1| Trk-type K transport system, membrane component [Cenarchaeum
           symbiosum A]
 gi|118194623|gb|ABK77541.1| Trk-type K transport system, membrane component [Cenarchaeum
           symbiosum A]
          Length = 609

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 3/103 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDV 288
           LV     L      + +       VV EG    GI+T+ DI              ++ D+
Sbjct: 26  LVLPRGMLTRRAASMMQSSEHDDVVVTEGGVPVGIVTDEDILGKVGDYKVTAEETTLGDI 85

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M +    I E   L  A+  + +H I  L V+      IGI+ 
Sbjct: 86  MSEPLHTIDEHASLREAINKMNKHGIRKLPVLSKKNTVIGIIT 128



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 9/45 (20%), Positives = 20/45 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             + +  +     L +AI  +++     + V+ +   + GIIT G
Sbjct: 86  MSEPLHTIDEHASLREAINKMNKHGIRKLPVLSKKNTVIGIITHG 130


>gi|114777077|ref|ZP_01452097.1| CBS domain containing membrane protein [Mariprofundus ferrooxydans
           PV-1]
 gi|114552598|gb|EAU55058.1| CBS domain containing membrane protein [Mariprofundus ferrooxydans
           PV-1]
          Length = 154

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/149 (16%), Positives = 54/149 (36%), Gaps = 27/149 (18%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-- 273
            +             P  K    + +     SE+    + VVDE ++L G++TE D+   
Sbjct: 2   SYTKVFARDIMNAEPPFCKPDATIREVARRFSEEDITGLLVVDEDKRLLGVVTETDLIDQ 61

Query: 274 -RNFH-----------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
            +N H                         L  ++  ++     + +  DT L+    ++
Sbjct: 62  QKNLHVPTAVALFDMVIPMGEAKFESELARLQAVTAGELASDGVRTVGPDTELSEIASIM 121

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +++  L V+D     IG++   D+++ 
Sbjct: 122 GDNSVHHLPVLDGD-VVIGLIGKHDVIKA 149


>gi|257095711|ref|YP_003169352.1| CBS domain-containing protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
 gi|257048235|gb|ACV37423.1| CBS domain containing protein [Candidatus Accumulibacter phosphatis
           clade IIA str. UW-1]
          Length = 153

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE------ 286
           V    PL +A+ ++SE   G V +V EG KL G++T  ++     K      V       
Sbjct: 17  VHPDSPLSEAVIMMSENDIGSV-IVMEGGKLAGMLTFREVLSILAKRQTERRVGPTPPIA 75

Query: 287 -----DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                + M ++P     D  +    +++   +   + V+ +    +GIV F D+ + 
Sbjct: 76  EILVLEAMDRDPPTTDPDMDVDELRRIMVDTHTRYVPVM-EGDTIVGIVSFHDVAKA 131


>gi|170739033|ref|YP_001767688.1| peptidase M50 [Methylobacterium sp. 4-46]
 gi|168193307|gb|ACA15254.1| peptidase M50 [Methylobacterium sp. 4-46]
          Length = 366

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/97 (20%), Positives = 42/97 (43%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + DA+  L         VVD   +L+G++T  D+ R          V +VM  +  
Sbjct: 245 PSSRVEDAVQELIATTQHEFPVVDGAGRLRGVLTRDDMIRALRDRGPDAPVLEVMRSDIP 304

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + +   L  A++L+++  +  + V D   + +G++ 
Sbjct: 305 SVRDRQPLEDALRLMQESGVPAVGVTDALGRLVGLIT 341



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D MI   + +   + +  A+Q L         VVD   +  G++   D++R 
Sbjct: 232 AGDAMITRYESLGPSSRVEDAVQELIATTQHEFPVVDGAGRLRGVLTRDDMIRA 285


>gi|153871838|ref|ZP_02000906.1| Cl- channel, voltage gated [Beggiatoa sp. PS]
 gi|152071697|gb|EDN69095.1| Cl- channel, voltage gated [Beggiatoa sp. PS]
          Length = 475

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               S      + +  + +  PL+  +    +       VV+E  +L GI+T  D+    
Sbjct: 340 MDSISVNEAMTEKVDTIPLTMPLLRLMERFDQNHHHGFPVVNEVGELAGIVTTKDLDNAI 399

Query: 277 HKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFL 333
               L   +V D+ +++  V      ++ A++ L   ++S L VV+D    K IGIV   
Sbjct: 400 AAGRLGGRTVADIAVRDVLVTYPFEPMSAALERLGMRDVSQLPVVEDEGSRKLIGIVLRT 459

Query: 334 DLLRF 338
           D+++ 
Sbjct: 460 DIIKA 464


>gi|49481309|ref|YP_038353.1| CBS domain-containing protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|49332865|gb|AAT63511.1| CBS domain protein [Bacillus thuringiensis serovar konkukian str.
           97-27]
          Length = 210

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRKEDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 180 VVKDTKQGLEVVGRITKTNITRA 202


>gi|282164974|ref|YP_003357359.1| hypothetical protein MCP_2304 [Methanocella paludicola SANAE]
 gi|282157288|dbj|BAI62376.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 382

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 53/127 (41%), Gaps = 4/127 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + ++    + +       P +     + +A  ++ E +   + V D+  K+ G++T  ++
Sbjct: 53  VRSIHDLKTGISGLVRKTPKITPHTTICEAARLMVENQLKQLPVFDK--KVIGVVTNENL 110

Query: 273 FRNFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R   K +     V  +M ++   +     +   + + R+  IS L V+    + +GIV 
Sbjct: 111 LRESSKIEFGLKPVSGIMSEDVVSVEASDHVGKLVNIFREEGISRLPVLSK-GRLVGIVT 169

Query: 332 FLDLLRF 338
             DLL  
Sbjct: 170 MHDLLEL 176



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 17/119 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           V+    +   + I  E+    + V+    +L GI+T  D+                    
Sbjct: 135 VEASDHVGKLVNIFREEGISRLPVL-SKGRLVGIVTMHDLLELIMPKKIGAGKDSVGADN 193

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  + V+D+M ++   +  D+ +  +++L+   +I  L+VV + +   G++   D+L
Sbjct: 194 SPMRNIKVKDIMTESVVTVRPDSTIKESIELMLDRDIQGLVVV-EGKAVKGVLTRTDVL 251



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           + D+   V I   L + + +        V V D G++  G++TE  I R+ H       +
Sbjct: 7   TTDNFERVDIKAKLQEVLPLFKNTNNPAVLVFD-GKEYAGMVTEKSIVRSIHD--LKTGI 63

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ++ K PK I   T +  A +L+ ++ +  L V D   K IG+V   +LLR 
Sbjct: 64  SGLVRKTPK-ITPHTTICEAARLMVENQLKQLPVFDK--KVIGVVTNENLLRE 113


>gi|187729850|ref|YP_001789024.1| sugar phosphatase isomerase [Tetragenococcus halophilus]
 gi|170676042|dbj|BAG14312.1| sugar phosphatase isomerase [Tetragenococcus halophilus]
          Length = 180

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 59/164 (35%), Gaps = 9/164 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
             + G    +   A EK+     R+ I G G+SG +    A  L   G   F +      
Sbjct: 12  DQVMGMGDERQLEAAEKLIDKNKRIFILGAGRSGLMAKGFAMRLMHIGYTVFVIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I + D+++ +S SG +  +      A+   + L+++TS   S +    D  + +
Sbjct: 72  -----SIQKGDVLVSVSGSGKTGSVLDPSKKAKDDGVKLVSVTSAADSPLGQIGDATIVV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           P   +S        L  T          D L + L    N S +
Sbjct: 127 PGATKSGSGVKSIQLLSTLFDQSVHITLDVLCLMLSRRDNISND 170


>gi|153214300|ref|ZP_01949317.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153828562|ref|ZP_01981229.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|254224946|ref|ZP_04918561.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|254285256|ref|ZP_04960221.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|124115448|gb|EAY34268.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|125622634|gb|EAZ50953.1| conserved hypothetical protein [Vibrio cholerae V51]
 gi|148875957|gb|EDL74092.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|150424528|gb|EDN16464.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
          Length = 278

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 72  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 124

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 125 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 183

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 184 SGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 235


>gi|91774375|ref|YP_544131.1| CBS domain-containing protein [Methylobacillus flagellatus KT]
 gi|91708362|gb|ABE48290.1| CBS domain containing membrane protein [Methylobacillus flagellatus
           KT]
          Length = 410

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 21/127 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--------------------I 272
           V+ G  L +A  +L       + V+D   ++ GIIT  D                    I
Sbjct: 261 VEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIITRFDFMKHANLEAYPGFEEKLRKFI 320

Query: 273 FRNFHKDLNTLSV-EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R F  + +   V   +M      + EDT +   + LL +  I  + V+D  ++ +GIV 
Sbjct: 321 RRTFLVETDKPEVVGQIMTSKVLTVSEDTHIVQLVPLLSERGIHHVPVLDHERRLVGIVT 380

Query: 332 FLDLLRF 338
             DL+  
Sbjct: 381 QTDLIAA 387



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    ++  D+M ++   +   TLL  A  LL  H+I  L V+D   + IGI+  
Sbjct: 238 MQAYKRRFGEITCGDIMSRDVVSVEYGTLLEEAWPLLLNHHIKALPVIDRAHRVIGIITR 297

Query: 333 LDLLR 337
            D ++
Sbjct: 298 FDFMK 302



 Score = 40.7 bits (94), Expect = 0.36,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 26/52 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V     ++  + +LSE+    V V+D  ++L GI+T+ D+    ++     +
Sbjct: 345 VSEDTHIVQLVPLLSERGIHHVPVLDHERRLVGIVTQTDLIAALYRGRLEET 396


>gi|56697064|ref|YP_167427.1| CBS domain-containing protein [Ruegeria pomeroyi DSS-3]
 gi|56678801|gb|AAV95467.1| CBS domain protein [Ruegeria pomeroyi DSS-3]
          Length = 144

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 4/97 (4%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTL 301
           IL+EKR G V V D+G+  +GI++E DI R          +  V   M K+      D  
Sbjct: 30  ILAEKRIGTVVVSDDGETAQGILSERDIVRELAASGSGCLSEPVSTYMTKDLITCGRDAK 89

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +  + +     + V+++  K +G+V   D+++ 
Sbjct: 90  VQDVLSQMTEGRFRHMPVIEE-GKLVGLVTLGDVVKA 125


>gi|328952794|ref|YP_004370128.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328453118|gb|AEB08947.1| CBS domain containing membrane protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 134

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 55/109 (50%), Gaps = 14/109 (12%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------LNTLSVEDVM 289
           A  I+   R   + V+D GQKL GI++E D+FR+                + ++ +E +M
Sbjct: 23  ANDIMKLGRIRHLPVLD-GQKLAGIVSERDLFRSSLAQALGHEPDKARNVMKSIRIEQIM 81

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +   I  +  +  A++L+ +H I  L VV +  + IG++   D++R 
Sbjct: 82  VTDVISISPEADIKEAVRLMLKHKIGCLPVVQED-RLIGLLTETDIMRL 129



 Score = 44.1 bits (103), Expect = 0.031,   Method: Composition-based stats.
 Identities = 17/75 (22%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            + H   K   +             +  +     + +A+ ++ + + GC+ VV E  +L 
Sbjct: 60  ALGHEPDKARNVMKSIRIEQIMVTDVISISPEADIKEAVRLMLKHKIGCLPVVQED-RLI 118

Query: 265 GIITEGDIFRNFHKD 279
           G++TE DI R F K+
Sbjct: 119 GLLTETDIMRLFLKE 133



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+++M+++   +     L++A  +++   I  L V+D  QK  GIV   DL R
Sbjct: 1   MKVKEIMVRDVATLDAGDELSLANDIMKLGRIRHLPVLD-GQKLAGIVSERDLFR 54


>gi|156742435|ref|YP_001432564.1| polynucleotide adenylyltransferase region [Roseiflexus castenholzii
           DSM 13941]
 gi|156233763|gb|ABU58546.1| Polynucleotide adenylyltransferase region [Roseiflexus castenholzii
           DSM 13941]
          Length = 872

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 3/151 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
            A    R                  +    +        +    I   +  A  +L    
Sbjct: 276 AAAAYVRGVDAETLLARTETAVREVMQPALTAADIMTRPVHTAPIDATVAQAEELLLRYG 335

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV---AMQ 307
            G + VV+    ++G+I+  D+ R     L    +   +   P ++  D  L     A+ 
Sbjct: 336 HGALPVVNHDGVVQGLISRRDLDRALRHGLRDAPLARYLWHGPTLLPPDASLATVRSALA 395

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                    L+VVD  ++ +GI+   DLLR 
Sbjct: 396 ADNGDRTGRLLVVDAHKRLLGIITRSDLLRA 426



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 26/62 (41%), Gaps = 3/62 (4%)

Query: 228 DSIPLVKIGCPL---IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               L+     L     A+   +  R G + VVD  ++L GIIT  D+ R +    +   
Sbjct: 376 HGPTLLPPDASLATVRSALAADNGDRTGRLLVVDAHKRLLGIITRSDLLRAWAAGQDAGK 435

Query: 285 VE 286
           ++
Sbjct: 436 ID 437


>gi|84490210|ref|YP_448442.1| hypothetical protein Msp_1428 [Methanosphaera stadtmanae DSM 3091]
 gi|84373529|gb|ABC57799.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 274

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 20/104 (19%), Positives = 50/104 (48%), Gaps = 3/104 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLSVEDVMIKNP 293
                +  + ++ +   G + ++D+   + G++T+ D  RN   K  +   ++D+M    
Sbjct: 86  PSDSKVKILKLMVDNHIGGIPIIDDND-IVGMVTKTDFLRNVDTKPYDETPIKDIMTNRV 144

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +  D  L  A +L+  ++++ L+VV +    +GI+   D+ +
Sbjct: 145 ITVSPDDRLVHARRLMIDNDVARLVVV-NSGLIMGIITAKDMAK 187



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 49/119 (41%), Gaps = 8/119 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVA-VVDEGQKLKGIITEGDIFRNFHKD----- 279
               I  V+    + DA+ ++ + +   +  +  +  +L GI+TE DI            
Sbjct: 7   MAKDIVTVRKDQTVSDALKLMRKHKISRLPAISSKTNELVGIVTEKDIATKIASAKYEEV 66

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+ + +  +M  +             ++L+  ++I  + ++DD    +G+V   D LR
Sbjct: 67  PLSHMRISTIMTGDVITGAPSDSKVKILKLMVDNHIGGIPIIDDND-IVGMVTKTDFLR 124



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
             + +  V     L+ A  ++ +     + VV+    + GIIT  D+ +           
Sbjct: 140 MTNRVITVSPDDRLVHARRLMIDNDVARLVVVN-SGLIMGIITAKDMAKTIVEFKERVPE 198

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  +  L V++VM +  +   +D  +     ++     S + V DD  K  GIV   
Sbjct: 199 KYQHTQIRNLFVQEVMSQTIETTTKDATIAQVANIMVSKEFSGMPVSDDKNKVQGIVSKS 258

Query: 334 DLLRF 338
           D+LR+
Sbjct: 259 DILRY 263



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDL 335
           ++++ VM K+   + +D  ++ A++L+R+H IS L  +     + +GIV   D+
Sbjct: 1   MTIDKVMAKDIVTVRKDQTVSDALKLMRKHKISRLPAISSKTNELVGIVTEKDI 54



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/75 (20%), Positives = 27/75 (36%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +  +F    P     T             +I        +     I+  K F  + V D+
Sbjct: 188 TIVEFKERVPEKYQHTQIRNLFVQEVMSQTIETTTKDATIAQVANIMVSKEFSGMPVSDD 247

Query: 260 GQKLKGIITEGDIFR 274
             K++GI+++ DI R
Sbjct: 248 KNKVQGIVSKSDILR 262


>gi|254505861|ref|ZP_05118006.1| transcriptional regulator [Vibrio parahaemolyticus 16]
 gi|219551084|gb|EED28064.1| transcriptional regulator [Vibrio parahaemolyticus 16]
          Length = 267

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 66/162 (40%), Gaps = 3/162 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           I+ +  + SL+ + +           E +   +  +   G+G S  +G  LA  L   G 
Sbjct: 86  ISAQSAVDSLQDTAKLIDRKSLARICELVHNAR-FIGCVGVGASSIVGRYLAYRLVRIGK 144

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +        +    G     D+   +S SGS+ E+      A R  +P++++T+ + S 
Sbjct: 145 KAIMYEDTHLAAMSAGRSDSGDMWFSVSSSGSTKEVIHAATQAHRRGVPVVSLTNISHSP 204

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           ++  +D  L +   PE    G A  +  +  L + DAL   L
Sbjct: 205 LSAISDE-LLVAARPEGPLTGGAFASK-VGALLLVDALINTL 244


>gi|295703980|ref|YP_003597055.1| CBS domain-containing protein [Bacillus megaterium DSM 319]
 gi|294801639|gb|ADF38705.1| CBS domain protein [Bacillus megaterium DSM 319]
          Length = 140

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDVM 289
                P+  A  ++ +   G V V  E  ++ G+IT+ DI        KD NT+   D M
Sbjct: 15  CTPHDPITAAAKLMRDINCGSVPVCQEN-RVMGMITDRDIVLNCVADGKDCNTVHCHDCM 73

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            K+      DT +    +++  H I  ++VV++    +GI    DL
Sbjct: 74  TKDVITCSPDTDIHECARMMADHQIRRIIVVENNNM-VGICAIGDL 118



 Score = 44.5 bits (104), Expect = 0.027,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V +VM K+ K       +T A +L+R  N   + V     + +G++   D++
Sbjct: 2   TTVREVMTKDVKACTPHDPITAAAKLMRDINCGSVPVC-QENRVMGMITDRDIV 54


>gi|294496521|ref|YP_003543014.1| signal transduction protein with CBS domains [Methanohalophilus
           mahii DSM 5219]
 gi|292667520|gb|ADE37369.1| putative signal transduction protein with CBS domains
           [Methanohalophilus mahii DSM 5219]
          Length = 134

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 53/112 (47%), Gaps = 6/112 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
           V +     +    ++ +    V  VDE  +  G ++E DI  R   K+    S+ED+M  
Sbjct: 19  VPMDATAAEVAETMANRDVSAVVAVDENGETFGFVSEMDILSRLGDKNWEIASIEDLMAS 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-----KAIGIVHFLDLLRF 338
           + + +     L  A + + + +I  L+V+ + +     + IGI+  +D++++
Sbjct: 79  SVETVNPGMKLKDAAKQMAEKHIHRLIVMSEDKVGASYRPIGILSPIDVIKY 130



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 25/55 (45%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V+D M +    +  D       + +   ++S ++ VD+  +  G V  +D+L
Sbjct: 5   NMQVKDAMSRGVVTVPMDATAAEVAETMANRDVSAVVAVDENGETFGFVSEMDIL 59


>gi|293374883|ref|ZP_06621184.1| transcriptional regulator, RpiR family [Turicibacter sanguinis
           PC909]
 gi|325843204|ref|ZP_08167890.1| transcriptional regulator, RpiR family [Turicibacter sp. HGF1]
 gi|292646486|gb|EFF64495.1| transcriptional regulator, RpiR family [Turicibacter sanguinis
           PC909]
 gi|325489448|gb|EGC91818.1| transcriptional regulator, RpiR family [Turicibacter sp. HGF1]
          Length = 279

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 64/163 (39%), Gaps = 6/163 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M+       S +   + L  ++  Q     +  +   L+   S +  +        +E  
Sbjct: 70  MNIAKQMMNSGSVNSNDLNVSNLKQSLKNILDNKVDELTQTISLMDEKTVESVLDLLE-- 127

Query: 61  KAIKGRVV-ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
              K RVV    +G +  +    A      G  +      E        +T  D+IIV+S
Sbjct: 128 ---KARVVQFAAVGNTIPVALDAAYKFNQIGISAVATPIHETQLALTYTLTEQDIIIVIS 184

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            SG+S +L  ++  A++ +I ++ IT+ + S +A   D  +T 
Sbjct: 185 NSGASKDLVTLIDAAKKHNIKVVGITNHDNSPIAVLCDYHITT 227


>gi|222086057|ref|YP_002544589.1| inosine-5prime-monophosphate dehydrogenase protein [Agrobacterium
           radiobacter K84]
 gi|221723505|gb|ACM26661.1| inosine-5prime-monophosphate dehydrogenase protein [Agrobacterium
           radiobacter K84]
          Length = 144

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKN 292
              + +A  +L+E R G + VV    K+ GI TE D+     K   +     +  +M   
Sbjct: 22  NTTVAEAARMLNENRIGAIVVVGMAGKISGIFTERDVVNAVAKHGGECLDQPIASLMTAK 81

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                E+T     M+++       + V +D  K  GI+   D+++
Sbjct: 82  VHRCKEETTTDELMEVMTLRRFRHVPV-EDKGKLSGIISIGDVVK 125



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/48 (22%), Positives = 22/48 (45%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +N      +T +  A ++L ++ I  ++VV    K  GI    D++  
Sbjct: 14  RNVVTTGGNTTVAEAARMLNENRIGAIVVVGMAGKISGIFTERDVVNA 61


>gi|254180049|ref|ZP_04886648.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1655]
 gi|184210589|gb|EDU07632.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1655]
          Length = 346

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 170 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 225

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 226 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 279

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 280 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 332

Query: 199 FSEND 203
            +  +
Sbjct: 333 LNVEE 337


>gi|163754304|ref|ZP_02161426.1| CBS domain protein, putative [Kordia algicida OT-1]
 gi|161325245|gb|EDP96572.1| CBS domain protein, putative [Kordia algicida OT-1]
          Length = 156

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 8/142 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           F          T    A  V        +  K    + + I  L + +     VV++  +
Sbjct: 6   FQGARKVQANSTNKAEAFKVSDYMTRNLITFKPEQTVEEVIQKLIQHKISGGPVVNDQNE 65

Query: 263 LKGIITEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           L GII+EGD        R ++       +E  M KN + I  D  +  A     +     
Sbjct: 66  LIGIISEGDCIKQISDSRYYNMPFEHNKIEAHMAKNVETIDGDLNIFDAANKFIETKRRR 125

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
             +V +  K +G +   D+L+ 
Sbjct: 126 FPIV-ENGKLVGQISQKDILKA 146


>gi|229515185|ref|ZP_04404645.1| sialic acid utilization regulator RpiR family [Vibrio cholerae TMA
           21]
 gi|229347890|gb|EEO12849.1| sialic acid utilization regulator RpiR family [Vibrio cholerae TMA
           21]
          Length = 276

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 70  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 122

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 123 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 181

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 182 SGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 233


>gi|222150286|ref|YP_002559439.1| hypothetical protein MCCL_0036 [Macrococcus caseolyticus JCSC5402]
 gi|222119408|dbj|BAH16743.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 149

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 33/145 (22%), Positives = 63/145 (43%), Gaps = 8/145 (5%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + + G G+SG +    A  L   G  ++ V            I ++D+ ++ S SGS+  
Sbjct: 6   IFVAGKGRSGLVIQSFAMRLNQLGKKAYVVGETTTP-----SIQKNDVFVIASGSGSTAH 60

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-LAPTTSAIMQL-- 183
           LK +   A+     ++ +++++KS +A  AD+ + LP   +    G   P  S   Q   
Sbjct: 61  LKLLAQTAKDNEAYVLLLSTKDKSPIADIADLTIVLPAGTKYDAEGSKQPLGSLFEQSSQ 120

Query: 184 AIGDALAIALLESRNFSENDFYVLH 208
              D++ + + E+ N  E      H
Sbjct: 121 IYLDSVVLTIQEALNVDEETMQNNH 145


>gi|159044294|ref|YP_001533088.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
 gi|157912054|gb|ABV93487.1| hypothetical protein Dshi_1745 [Dinoroseobacter shibae DFL 12]
          Length = 144

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 52/128 (40%), Gaps = 6/128 (4%)

Query: 218 VCASDVMHSGDSIPLVK--IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    ++ S  S  +V       + DA  +LS ++ G V V   G+   GI++E DI R 
Sbjct: 1   MLVHQILKSKASAEVVTIGPDASVADAAKVLSLRKIGSVVVSSNGKTADGILSERDIVRE 60

Query: 276 FH---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    T +V ++M ++      D      +  + +     + VV    + IG++  
Sbjct: 61  VGVRGAGCLTETVGNMMTRDLVTCGPDESADKVLMQMTEGRFRHMPVV-QDGEMIGLITL 119

Query: 333 LDLLRFGI 340
            D ++  +
Sbjct: 120 GDAVKARL 127


>gi|325527333|gb|EGD04695.1| hypothetical protein B1M_10156 [Burkholderia sp. TJI49]
          Length = 141

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L +A  ++SE   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQSLREAAKLMSELNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            VE V+        ED  ++   + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  PVEGVVSGPTNWCYEDDDISAVQKKMEDAQIRRVPVVDRQKRLVGIVALGDL 118



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   I     L  A +L+ + N+  L V D   + IG++   D++
Sbjct: 4   VSEVMTRDAATIGPTQSLREAAKLMSELNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|291438885|ref|ZP_06578275.1| RpiR-family transcriptional regulator [Streptomyces ghanaensis ATCC
           14672]
 gi|291341780|gb|EFE68736.1| RpiR-family transcriptional regulator [Streptomyces ghanaensis ATCC
           14672]
          Length = 313

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R  + G+G SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 159 RTDVYGVGASGLVAQDLTQKLLRIGLMAHAHSDPHLAVTNAVQLRAGDVAIAITHSGSTG 218

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +A+T    S V  +AD VLT     ES     A  +S   QL +
Sbjct: 219 DVIEPLRVAFDHGATTVAVTGRPDSPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 277

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 278 VDCLFVGVAQR 288


>gi|288560080|ref|YP_003423566.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288542790|gb|ADC46674.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 122

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 8/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           V++    + A   L + +   + VVDE  K+ GI+T  D+  N    K      V+DVM+
Sbjct: 8   VELDEATVFAFEKLMKHKISAMPVVDEDGKMVGIVTATDLGHNLILDKYQYGTKVKDVMV 67

Query: 291 KNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  D  +  A+ ++ +       I+ L V+D+  + +GI+   D+++ 
Sbjct: 68  TDVAYVSSDCTIKEAISVMFEKAPGDSIINQLPVLDN-GELVGIISDGDIIKI 119



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 17/47 (36%), Positives = 24/47 (51%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           M K+   +  D     A + L +H IS + VVD+  K +GIV   DL
Sbjct: 1   MSKDVLTVELDEATVFAFEKLMKHKISAMPVVDEDGKMVGIVTATDL 47



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 4/50 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAV----VDEGQKLKGIITEGDIFRNFHK 278
           V   C + +AI+++ EK  G   +    V +  +L GII++GDI +   +
Sbjct: 73  VSSDCTIKEAISVMFEKAPGDSIINQLPVLDNGELVGIISDGDIIKILKE 122


>gi|239944145|ref|ZP_04696082.1| hypothetical protein SrosN15_24303 [Streptomyces roseosporus NRRL
           15998]
 gi|239990600|ref|ZP_04711264.1| hypothetical protein SrosN1_25060 [Streptomyces roseosporus NRRL
           11379]
 gi|291447615|ref|ZP_06587005.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
 gi|291350562|gb|EFE77466.1| conserved hypothetical protein [Streptomyces roseosporus NRRL
           15998]
          Length = 134

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V D      GIITE DI        D +  +      
Sbjct: 14  IGPTHTLRQAARLMSARRIGAAVVHDPDTCGLGIITERDILDAVGSGMDPDRETASAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + +       L+V+D     +GIV   D++R
Sbjct: 74  TDVVFAAPAWTLEEAAEAMTHGGFRHLIVLDGDG-PVGIVSVRDIIR 119



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 20/54 (37%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M      I     L  A +L+    I   +V D     +GI+   D+L  
Sbjct: 3   VRDAMSTVVLTIGPTHTLRQAARLMSARRIGAAVVHDPDTCGLGIITERDILDA 56


>gi|229546378|ref|ZP_04435103.1| transcriptional regulator RpiR [Enterococcus faecalis TX1322]
 gi|307290586|ref|ZP_07570496.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
 gi|229308502|gb|EEN74489.1| transcriptional regulator RpiR [Enterococcus faecalis TX1322]
 gi|306498372|gb|EFM67879.1| transcriptional regulator, RpiR family [Enterococcus faecalis
           TX0411]
          Length = 285

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 122 EKLIKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 180

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 181 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 237

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 238 LNGGSLAGKISQLYICDLLV 257


>gi|220921491|ref|YP_002496792.1| peptidase M50 [Methylobacterium nodulans ORS 2060]
 gi|219946097|gb|ACL56489.1| peptidase M50 [Methylobacterium nodulans ORS 2060]
          Length = 372

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 42/97 (43%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + DA+  L         VVD   +L+G++T  D+ R          V +VM  +  
Sbjct: 245 PNSRVEDAVQGLIATTQHEFPVVDGAGRLRGVLTRDDMIRALRDRGPDAPVLEVMRADIP 304

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + +   L  A++L+++  +  + V D   + +G+V 
Sbjct: 305 TVRDRQPLEDALRLMQEGRLPAVGVTDGFGRLVGLVT 341



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             D MI   + +  ++ +  A+Q L         VVD   +  G++   D++R 
Sbjct: 232 AGDAMITRFESLGPNSRVEDAVQGLIATTQHEFPVVDGAGRLRGVLTRDDMIRA 285



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 24/49 (48%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           A  +      IP V+   PL DA+ ++ E R   V V D   +L G++T
Sbjct: 293 APVLEVMRADIPTVRDRQPLEDALRLMQEGRLPAVGVTDGFGRLVGLVT 341


>gi|170734562|ref|YP_001773676.1| CBS domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169820600|gb|ACA95181.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
          Length = 143

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAQLMERYDIGALPVCD-NNRLVGMVTDRDLAVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +V    P     +D  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RIHEVAS-GPIEWCFDDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   I     +  A QL+ +++I  L V D+  + +G+V   DL
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAQLMERYDIGALPVCDN-NRLVGMVTDRDL 53


>gi|134293753|ref|YP_001117489.1| HPP family protein+B94 [Burkholderia vietnamiensis G4]
 gi|134136910|gb|ABO58024.1| HPP family protein+B94 [Burkholderia vietnamiensis G4]
          Length = 391

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 48/120 (40%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R + +              
Sbjct: 259 VSPSTSVTAALTLLDRHRVKALPVVDGEARLIGIVTRADLTRPWRRPPPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPASVASVMTRDVACVPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L   D+M  +   +   T +T A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGELRCADLMTTHAIEVSPSTSVTAALTLLDRHRVKALPVVDGEARLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 21/47 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               +  V    P+   + + +      + VVD  ++L GIIT+ D+
Sbjct: 331 MTRDVACVPQTMPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDL 377


>gi|331082357|ref|ZP_08331483.1| hypothetical protein HMPREF0992_00407 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|330400843|gb|EGG80444.1| hypothetical protein HMPREF0992_00407 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 286

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 32/171 (18%), Positives = 69/171 (40%), Gaps = 7/171 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +    E   L   +  L   +    +   + +   + R+ + G G S          L  
Sbjct: 104 KIFAIESSALEQTKQELDISV---MNKVADVLLKAR-RINLVGTGGSAISARDFQHKLLK 159

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  +      +       ++T +D++  +S SGS+  +   +  A++ +  +I +T ++
Sbjct: 160 IGVRAELQEDKDLQLMSASLLTEEDVLFAISHSGSNLHVAETIELAQKRNAKIITLTMKS 219

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
           K+++   AD    L    E         ++ + QLA+ D L +AL+  +NF
Sbjct: 220 KNILVEKADY--PLYVVSEKTIFESESFSARLAQLAMLDCL-VALMAFKNF 267


>gi|289617901|emb|CBI55478.1| unnamed protein product [Sordaria macrospora]
          Length = 536

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 62/189 (32%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + + L  P           P  S+ M       +AI +            V+H       
Sbjct: 59  SAVTLDSPITKRITL--KVPLVSSPMDTVTEHEMAIHMALQGGVG-----VIHHNCSPDE 111

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIIT 268
                  V            ++     + +A  +  +  FG   V    D G KL GI+T
Sbjct: 112 QAEMVRKVKRYENGFILDPVVITRDTTVGEAKALKEKWGFGGFPVTESGDIGSKLIGIVT 171

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F  DL+   V +VM+ +         L  A ++L Q     L +VD     + 
Sbjct: 172 NRDI--QFETDLDK-PVSEVMVTDLITATAGVNLLEANKILAQSKKGKLPIVDKDGNLVS 228

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 229 MISRSDLTK 237


>gi|229508122|ref|ZP_04397627.1| sialic acid utilization regulator RpiR family [Vibrio cholerae BX
           330286]
 gi|229511639|ref|ZP_04401118.1| sialic acid utilization regulator RpiR family [Vibrio cholerae B33]
 gi|229518778|ref|ZP_04408221.1| sialic acid utilization regulator RpiR family [Vibrio cholerae RC9]
 gi|229607683|ref|YP_002878331.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           MJ-1236]
 gi|229343467|gb|EEO08442.1| sialic acid utilization regulator RpiR family [Vibrio cholerae RC9]
 gi|229351604|gb|EEO16545.1| sialic acid utilization regulator RpiR family [Vibrio cholerae B33]
 gi|229355627|gb|EEO20548.1| sialic acid utilization regulator RpiR family [Vibrio cholerae BX
           330286]
 gi|229370338|gb|ACQ60761.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           MJ-1236]
          Length = 276

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 70  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 122

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 123 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 181

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 182 SGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 233


>gi|218891855|ref|YP_002440722.1| hypothetical protein PLES_31331 [Pseudomonas aeruginosa LESB58]
 gi|218772081|emb|CAW27860.1| conserved hypothetical protein [Pseudomonas aeruginosa LESB58]
          Length = 137

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 7   MSREVRTVPPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLAVRGLADGLGADR 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 66  PVREVMSGELRYCFEDEEVDHVAKNMAQLEKRRLPVMDRNKRLVGIVSLANI 117



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V ++M +  + +   T L  A  L+RQ +I  L+V ++ ++  G+V   DL
Sbjct: 1   MKVREIMSREVRTVPPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDL 52


>gi|148656138|ref|YP_001276343.1| CBS domain-containing protein [Roseiflexus sp. RS-1]
 gi|148568248|gb|ABQ90393.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Roseiflexus sp. RS-1]
          Length = 623

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 53/121 (43%), Gaps = 13/121 (10%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAV-------VDEGQKLKGIITEGDIF-RNFHK 278
            + + +V     +++A   + + +   + V       +D G    GI+T+ D+  R   +
Sbjct: 159 TEPLVVVPPNTTILEAARRMRDAQASALIVDLPPYGMLDAGS---GIVTDSDLRNRVVAE 215

Query: 279 DLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L+ T  +  VM      +  D+L+   +  + +H +  L  +    + IGIV++ D LR
Sbjct: 216 GLDYTTPIAHVMSAPAITVPADSLVFEGLLKMIEHGVRHL-ALSRDGQIIGIVNYRDFLR 274

Query: 338 F 338
            
Sbjct: 275 L 275


>gi|18312666|ref|NP_559333.1| hypothetical protein PAE1489 [Pyrobaculum aerophilum str. IM2]
 gi|18160141|gb|AAL63515.1| conserved protein with sugar isomerase (SIS) domain [Pyrobaculum
           aerophilum str. IM2]
          Length = 202

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 38/192 (19%), Positives = 74/192 (38%), Gaps = 26/192 (13%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              + +    L+ E    F   +E+I  +  ++++ G+G+SG +G   A  L   G  S+
Sbjct: 13  ANFILNSLDKLKMEEIEAFVKTIEEIYHLNKKILVVGVGRSGLVGRAFAMRLRHLGARSY 72

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +            +   DL++ +S SG++  + A    A++    + AITS   S +  
Sbjct: 73  VLGETITP-----SVEEGDLVVAISGSGTTQIVVAAAEAAKKMKARVAAITSYYDSPLGR 127

Query: 155 HADIVLTLP------------------KEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            AD+V+ +P                        P G     +A+      DA+   L++ 
Sbjct: 128 VADLVVYIPGRTKVAAMDDYFARQILGVHEPLSPLGTLFEDTAM---VALDAVIAELMKR 184

Query: 197 RNFSENDFYVLH 208
              +E +    H
Sbjct: 185 LGKNEAELAKRH 196


>gi|115360365|ref|YP_777502.1| CBS domain-containing protein [Burkholderia ambifaria AMMD]
 gi|172065625|ref|YP_001816337.1| CBS domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|115285693|gb|ABI91168.1| CBS domain containing membrane protein [Burkholderia ambifaria
           AMMD]
 gi|171997867|gb|ACB68784.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
          Length = 143

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 41/113 (36%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVHIAPTDSIRHAAQLMERYDIGALPVCD-NNRLVGMVTDRDLTVRAISVGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + +V    P     ED  L      +    +  L VVD  Q+ +G++   D+
Sbjct: 67  RIHEVAS-GPIEWCFEDDPLDEIQHYMADAQLRRLPVVDHDQRLVGMLSLADI 118



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M ++   I     +  A QL+ +++I  L V D+  + +G+V   DL 
Sbjct: 4   VNEIMSQDVVHIAPTDSIRHAAQLMERYDIGALPVCDN-NRLVGMVTDRDLT 54


>gi|107026181|ref|YP_623692.1| CBS domain-containing protein [Burkholderia cenocepacia AU 1054]
 gi|116692635|ref|YP_838168.1| CBS domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|105895555|gb|ABF78719.1| CBS domain containing membrane protein [Burkholderia cenocepacia AU
           1054]
 gi|116650635|gb|ABK11275.1| CBS domain containing membrane protein [Burkholderia cenocepacia
           HI2424]
          Length = 391

 Score = 69.9 bits (170), Expect = 5e-10,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 46/120 (38%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------NFHKDLNT 282
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R               L  
Sbjct: 259 VAPSTSVAAALTLLDRHRVKALPVVDGEGRLIGIVTRADLTRPPRRPAPLWQRLSARLPQ 318

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + E   +T  + L        + VVD   + +GI+   DL+
Sbjct: 319 SFGGRPASVASVMTRDVASVPETLPITALVPLFTHSGHHHIPVVDASDRLVGIITQTDLV 378



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L   D+M K+   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLKCADLMTKHAIEVAPSTSVAAALTLLDRHRVKALPVVDGEGRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD   +L GIIT+ D+    ++    L   
Sbjct: 338 VPETLPITALVPLFTHSGHHHIPVVDASDRLVGIITQTDLVTGLYQQTQMLEAA 391


>gi|317497721|ref|ZP_07956036.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316895055|gb|EFV17222.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 186

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 35/191 (18%), Positives = 71/191 (37%), Gaps = 17/191 (8%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +++      L      ++ +   +     +K      R+ I G G+SG      A+ +  
Sbjct: 4   KTLQIITNELYKYGKLIKEDEVKEVVELCQK----ANRIFIAGAGRSGFCARGFANRMMH 59

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G   +FV            I   DL+IV S SG++  L +    A+     +  +T   
Sbjct: 60  LGFTVYFVGETTTP-----SIQEGDLLIVGSGSGTTASLVSDCKKAKAQKAIIATLTICP 114

Query: 149 KSVVACHADIVLTLP------KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFS 200
           ++ +   AD ++T+P       E  +      P  +   QL+    D++ + L+     +
Sbjct: 115 EAPIGEMADAIITIPGATQKNAEHTNDVVTEQPGGNLFEQLSWLIYDSIVMDLMPILGET 174

Query: 201 ENDFYVLHPGG 211
           E+  +  H   
Sbjct: 175 EDTMFKRHANM 185


>gi|239930522|ref|ZP_04687475.1| transcriptional regulator [Streptomyces ghanaensis ATCC 14672]
          Length = 275

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R  + G+G SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 121 RTDVYGVGASGLVAQDLTQKLLRIGLMAHAHSDPHLAVTNAVQLRAGDVAIAITHSGSTG 180

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +A+T    S V  +AD VLT     ES     A  +S   QL +
Sbjct: 181 DVIEPLRVAFDHGATTVAVTGRPDSPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 239

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 240 VDCLFVGVAQR 250


>gi|15641778|ref|NP_231410.1| hypothetical protein VC1775 [Vibrio cholerae O1 biovar El Tor str.
           N16961]
 gi|121585848|ref|ZP_01675642.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121727679|ref|ZP_01680774.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147675662|ref|YP_001217316.1| hypothetical protein VC0395_A1373 [Vibrio cholerae O395]
 gi|153817812|ref|ZP_01970479.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153821122|ref|ZP_01973789.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|227081920|ref|YP_002810471.1| Putative HTH-type transcriptional regulator ybbH [Vibrio cholerae
           M66-2]
 gi|255744810|ref|ZP_05418760.1| sialic acid utilization regulator RpiR family [Vibrio cholera CIRS
           101]
 gi|262161907|ref|ZP_06030925.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           INDRE 91/1]
 gi|262169775|ref|ZP_06037466.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           RC27]
 gi|298498155|ref|ZP_07007962.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9656298|gb|AAF94924.1| conserved hypothetical protein [Vibrio cholerae O1 biovar El Tor
           str. N16961]
 gi|121549986|gb|EAX60004.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|121629976|gb|EAX62384.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|126511632|gb|EAZ74226.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126521318|gb|EAZ78541.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|146317545|gb|ABQ22084.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|167832530|gb|ACA01840.1| RpiR family transcriptional regulator [Vibrio cholerae]
 gi|227009808|gb|ACP06020.1| Putative HTH-type transcriptional regulator ybbH [Vibrio cholerae
           M66-2]
 gi|227013675|gb|ACP09885.1| Putative HTH-type transcriptional regulator ybbH [Vibrio cholerae
           O395]
 gi|255737281|gb|EET92676.1| sialic acid utilization regulator RpiR family [Vibrio cholera CIRS
           101]
 gi|262022009|gb|EEY40719.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           RC27]
 gi|262028639|gb|EEY47294.1| sialic acid utilization regulator RpiR family [Vibrio cholerae
           INDRE 91/1]
 gi|297542488|gb|EFH78538.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 278

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/172 (16%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 72  MALAVDLSQSANQSQPKMDGDICEVSAQSAV----DSLMDTAKLIDR---AALNRICELV 124

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K  +   G+G S  +G  LA  L   G  +        +    G     D    +S 
Sbjct: 125 HGAK-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGQSVVGDAWFAISS 183

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  +P++++T+ + S ++  +D +L   +       G
Sbjct: 184 SGSTKEVVHAATQAHQRGVPVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 235


>gi|327473928|gb|EGF19341.1| CBS domain protein [Streptococcus sanguinis SK408]
          Length = 209

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L V+D+    K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVIDEDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.049,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|229031945|ref|ZP_04187932.1| transcriptional regulator [Bacillus cereus AH1271]
 gi|229098768|ref|ZP_04229706.1| transcriptional regulator [Bacillus cereus Rock3-29]
 gi|229104928|ref|ZP_04235585.1| transcriptional regulator [Bacillus cereus Rock3-28]
 gi|229117793|ref|ZP_04247158.1| transcriptional regulator [Bacillus cereus Rock1-3]
 gi|229163242|ref|ZP_04291197.1| transcriptional regulator [Bacillus cereus R309803]
 gi|228620305|gb|EEK77176.1| transcriptional regulator [Bacillus cereus R309803]
 gi|228665656|gb|EEL21133.1| transcriptional regulator [Bacillus cereus Rock1-3]
 gi|228678502|gb|EEL32722.1| transcriptional regulator [Bacillus cereus Rock3-28]
 gi|228684612|gb|EEL38552.1| transcriptional regulator [Bacillus cereus Rock3-29]
 gi|228729409|gb|EEL80399.1| transcriptional regulator [Bacillus cereus AH1271]
          Length = 210

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|226941473|ref|YP_002796547.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
           [Laribacter hongkongensis HLHK9]
 gi|226716400|gb|ACO75538.1| Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor
           [Laribacter hongkongensis HLHK9]
          Length = 839

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 43/106 (40%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
                P+ +A   + E   G + V+D   +  GI TE D+ +    D + L   +  VM 
Sbjct: 20  CAPDTPVHEAARQMREALCGSIIVLDGQGQPAGIWTEADVLKLDLHDPDGLRVPISSVMS 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              K +  DT    A    R   I   +V+D   +  GI+   D++
Sbjct: 80  SPVKTLPVDTPFHEAAIRFRHEGIRHYLVIDQQNQPRGILSQTDIV 125



 Score = 60.7 bits (146), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/111 (16%), Positives = 41/111 (36%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  ++      +A+  + +     V +        GI+T+ D+ R+   +     V
Sbjct: 143 PSAPPRFLRADASFAEAVAAMRQVTQEAVIIEYPDGG-YGILTQRDVVRHLDSNDPDQPV 201

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +  +          L  A +LL + +I  L +  +  +  G+V F D++
Sbjct: 202 GRLASRPLVTAKASASLYYARKLLAEKHIRHLGITSENNQLTGLVGFADIM 252



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 48/124 (38%), Gaps = 9/124 (7%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  + +  P  +A      +      V+D+  + +GI+++ DI  N   
Sbjct: 71  RVPISSVMSSPVKTLPVDTPFHEAAIRFRHEGIRHYLVIDQQNQPRGILSQTDIVLNQGA 130

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV-LMVVD--DCQKAIGIVHFL 333
           +  +    V  +    P+ +  D     A+  +RQ  ++   ++++  D     GI+   
Sbjct: 131 EFFIRLKEVGSIPSAPPRFLRADASFAEAVAAMRQ--VTQEAVIIEYPDGGY--GILTQR 186

Query: 334 DLLR 337
           D++R
Sbjct: 187 DVVR 190



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 25/57 (43%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             ++E ++         DT +  A + +R+     ++V+D   +  GI    D+L+ 
Sbjct: 6   QKTIESLVSPRLVTCAPDTPVHEAARQMREALCGSIIVLDGQGQPAGIWTEADVLKL 62


>gi|75910522|ref|YP_324818.1| signal transduction histidine kinase [Anabaena variabilis ATCC
           29413]
 gi|75704247|gb|ABA23923.1| signal transduction histidine kinase [Anabaena variabilis ATCC
           29413]
          Length = 1654

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 53/117 (45%), Gaps = 7/117 (5%)

Query: 222 DVMHSGDSIPLVKI--GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +       PLV +    P+ +AI  + + +  CV V+ + + L GI+T+ D+ R     
Sbjct: 7   HLFDHNLQKPLVMMASNIPVAEAIAQMYQAQTSCVLVIAKHE-LSGILTQTDVLRGIANQ 65

Query: 280 LN--TLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           +    L+V ++M +    + E  L  L   +Q   QH I  L V+DD  +   +V  
Sbjct: 66  MMFADLTVGELMSQPVITVHETELENLPNILQRFHQHQIRHLPVLDDQGQVQCVVTL 122


>gi|260581304|ref|ZP_05849121.1| N-acetylmannosamine kinase [Haemophilus influenzae RdAW]
 gi|260582359|ref|ZP_05850151.1| transcriptional regulator [Haemophilus influenzae NT127]
 gi|260092053|gb|EEW75999.1| N-acetylmannosamine kinase [Haemophilus influenzae RdAW]
 gi|260094510|gb|EEW78406.1| transcriptional regulator [Haemophilus influenzae NT127]
          Length = 293

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 16/196 (8%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 97  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 146

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 147 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 206

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 207 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 264

Query: 190 AIALLESRNFSENDFY 205
              L++     E D  
Sbjct: 265 YALLVQ----GEEDIA 276


>gi|296109148|ref|YP_003616097.1| CBS domain containing protein [Methanocaldococcus infernus ME]
 gi|295433962|gb|ADG13133.1| CBS domain containing protein [Methanocaldococcus infernus ME]
          Length = 260

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 48/121 (39%), Gaps = 7/121 (5%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 +   ++  +     + D I ++ +       VV    KL GII+  DI      
Sbjct: 1   MVKVSEYMTRNVITINEEATVKDVIELIKKTGHNSFPVV-RDGKLVGIISVRDIV----G 55

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     V+++M K     V   D  +    +++ +   S L VVD     +GI+  +D++
Sbjct: 56  EDENKKVKELMTKREDMVVTYPDANIMDVGRIMFRTGFSKLPVVDSENNLVGIISNMDVI 115

Query: 337 R 337
           R
Sbjct: 116 R 116



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 13/62 (20%), Positives = 24/62 (38%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                    ++M   + + +      ++D   I+    F  + VVD    L GII+  D+
Sbjct: 55  GEDENKKVKELMTKREDMVVTYPDANIMDVGRIMFRTGFSKLPVVDSENNLVGIISNMDV 114

Query: 273 FR 274
            R
Sbjct: 115 IR 116


>gi|881368|gb|AAA68942.1| YebK [Escherichia coli]
          Length = 208

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 33/166 (19%), Positives = 63/166 (37%), Gaps = 7/166 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  +  SL        + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 25  LDHVRHSLDKS---AINRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSD 80

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  +   AR     +IA+TS   + +A  A 
Sbjct: 81  DIVLQRMSCMNCSDGDVVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREAT 139

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 140 LAITLDVPEDTDIY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 183


>gi|48477612|ref|YP_023318.1| inosine-5'-monophosphate dehydrogenase [Picrophilus torridus DSM
           9790]
 gi|48430260|gb|AAT43125.1| inosine-5'-monophosphate dehydrogenase [Picrophilus torridus DSM
           9790]
          Length = 140

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/126 (23%), Positives = 64/126 (50%), Gaps = 7/126 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-R 274
           + + A D+MH  + +         + A  I+S++R G   ++ +  K +GIITE D+  +
Sbjct: 1   MVLYAEDIMHRDNRVY--DPDTDCLTASKIMSDERHG-YIIIGKNGKPEGIITEWDLINK 57

Query: 275 NFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +++N   + ++D+M  N   +   T +     ++  + I  L+V+ +  K +G++  
Sbjct: 58  VLARNINPEGIKLKDIMSTNLISVSSKTPMDRIADIMAINGIRRLLVI-ENGKFLGVITS 116

Query: 333 LDLLRF 338
            D+LRF
Sbjct: 117 RDILRF 122


>gi|332712116|ref|ZP_08432044.1| putative signal-transduction protein [Lyngbya majuscula 3L]
 gi|332348922|gb|EGJ28534.1| putative signal-transduction protein [Lyngbya majuscula 3L]
          Length = 464

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 27/126 (21%)

Query: 232 LVKIGCPLIDAITILS---------------------EKRFGCVAVVDEGQKLKGIITEG 270
           +V     LID I ++S                      +      +V E  KL GI TE 
Sbjct: 23  IVAPETLLIDIIALMSQEGGKSCSLPNFHSPSDQLTIREPRSSCVLVMESDKLLGIFTER 82

Query: 271 DIFRNFHKDLN--TLSVEDVMIKNPKVILEDT---LLTVAMQLLRQHNISVLMVVDDCQK 325
           DI R     +N   ++V +VM   P +    T    +  A+ + R+  I  L +VDD  +
Sbjct: 83  DIVRLTANGINFEEVTVAEVM-AQPVITFPQTACRDIFAALFIFRRFRIRHLPIVDDHGQ 141

Query: 326 AIGIVH 331
            +G+V 
Sbjct: 142 LVGVVS 147



 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 55/146 (37%), Gaps = 7/146 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
           F+E D   L   G        A  +     + P          A+ I    R   + +VD
Sbjct: 79  FTERDIVRLTANGINFEEVTVAEVMAQPVITFPQTACRDIFA-ALFIFRRFRIRHLPIVD 137

Query: 259 EGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +  +L G+++   I +       L    V +VM       L    +    +L+ +H +S 
Sbjct: 138 DHGQLVGVVSPERIRQVLRPANLLKLRRVSEVMTPQVVNALPTVSVLSLARLMNKHRVSC 197

Query: 317 LMVVDDCQK----AIGIVHFLDLLRF 338
           +++  D  +     +GIV   D+++F
Sbjct: 198 VVITSDHGQDNCLPVGIVTERDIVQF 223



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 56/128 (43%), Gaps = 8/128 (6%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK----LKGIITEGD 271
                S+VM       L      ++    ++++ R  CV +  +  +      GI+TE D
Sbjct: 162 KLRRVSEVMTPQVVNAL--PTVSVLSLARLMNKHRVSCVVITSDHGQDNCLPVGIVTERD 219

Query: 272 IFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           I +  +   +L+ +  +DVM     ++  +  L  A Q +++  +  L+V  +  K IGI
Sbjct: 220 IVQFQSLKLNLSKVQAQDVMSTPLFLLSPEDSLWTAHQEMQKRRVRRLVVSWNWGKEIGI 279

Query: 330 VHFLDLLR 337
           V    LLR
Sbjct: 280 VTQTTLLR 287


>gi|319792614|ref|YP_004154254.1| cbs domain containing membrane protein [Variovorax paradoxus EPS]
 gi|315595077|gb|ADU36143.1| CBS domain containing membrane protein [Variovorax paradoxus EPS]
          Length = 376

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 43/241 (17%), Positives = 85/241 (35%), Gaps = 24/241 (9%)

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G +  L A+L +   FS  L    + +  +V           +          P   A  
Sbjct: 127 GGAAALLAVLTHTTHFSSALFPFFTNSLLLVLAGVAYNSLTGRRYPHVQVAQPPRADARF 186

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH---SGDSIPLVKIGCP 238
             A  DA+     +  + S +D   L    +L +       +        +   V+ G P
Sbjct: 187 SQADIDAVLARYNQVLDISRDDLESLIQQTELESYKRRLGTLDCGDIMSPNPISVEFGTP 246

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-----------KDLNTLS--- 284
           L +A  ++ EKR   + V D  +++ GI+T+ D FR              +DL   +   
Sbjct: 247 LQEAWALMHEKRIKALPVTDRTRRVVGIVTQADFFRQLDLQHHEGIAGRLRDLIRATRTV 306

Query: 285 -------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  V  +M +  +V   +  +   + L  +     + ++D  ++  G++   D +R
Sbjct: 307 VSNKPEVVGQIMTRQVRVASAERPVVDLVPLFSEGGHHHIPIIDGEKRLTGMITQSDFVR 366

Query: 338 F 338
            
Sbjct: 367 A 367



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 27/56 (48%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
               + +     P++D + + SE     + ++D  ++L G+IT+ D  R  ++ + 
Sbjct: 318 MTRQVRVASAERPVVDLVPLFSEGGHHHIPIIDGEKRLTGMITQSDFVRALYRAVR 373


>gi|300023302|ref|YP_003755913.1| signal transduction protein [Hyphomicrobium denitrificans ATCC
           51888]
 gi|299525123|gb|ADJ23592.1| putative signal transduction protein with CBS domains
           [Hyphomicrobium denitrificans ATCC 51888]
          Length = 143

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
           +    + +    LS ++ G + +V E  K+ GII+E DI R   +   +   +     M 
Sbjct: 18  RQEDTIQEIALRLSSRKIGAIVIVGETGKVVGIISERDIIRLIAEHGAEALKMPASRGMT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +N     E   +   M  + +     L V++D    IGIV   D+++
Sbjct: 78  RNVVSCSETCTIDEIMDTMTRGRFRHLPVINDD-ALIGIVSIGDIVK 123



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +       VM        EDT+  +A++L     I  +++V +  K +GI+   D++R 
Sbjct: 6   ILKSKARGVMTAR----QEDTIQEIALRL-SSRKIGAIVIVGETGKVVGIISERDIIRL 59


>gi|209517837|ref|ZP_03266671.1| CBS domain containing membrane protein [Burkholderia sp. H160]
 gi|209501670|gb|EEA01692.1| CBS domain containing membrane protein [Burkholderia sp. H160]
          Length = 230

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 27/130 (20%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNT 282
               + DA  +  +   G + V+D   ++ GI+++GD+             R + + L++
Sbjct: 16  PDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLLHRVETGTGRGKRRWWLELLSS 75

Query: 283 LS--------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            +              V DVM  N   I ED  L     L+ + ++  + V+    + +G
Sbjct: 76  SAREQAARYVKEHGHIVGDVMCDNVISIPEDMPLNQIADLMGRRHLKRVPVL-KDGRLVG 134

Query: 329 IVHFLDLLRF 338
           IV   +L+R 
Sbjct: 135 IVSRSNLIRA 144



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M  +      D  +  A +L   H+I  + V+D   + IGIV   DLL
Sbjct: 1   MRALDIMTSSVITATPDMTIHDAAKLFVDHHIGGMPVLDANGRVIGIVSQGDLL 54


>gi|284033677|ref|YP_003383608.1| putative signal transduction protein with CBS domains [Kribbella
           flavida DSM 17836]
 gi|283812970|gb|ADB34809.1| putative signal transduction protein with CBS domains [Kribbella
           flavida DSM 17836]
          Length = 139

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 47/109 (43%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           V     L+DA   + +   G + +  E  +LKG++T+ DI         D   ++   + 
Sbjct: 15  VGENETLVDAARKMRDLDVGSLPICGEDNRLKGMLTDRDIVVKCLADGGDPTQVTAGSLG 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              P  I  D  +  A++ + +H +  L V+D     +G++   D+ R 
Sbjct: 75  EGKPVTIGADDSIEEALRTMAEHQVRRLPVIDGHD-LVGMLAQADIARE 122



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 8/54 (14%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  ++M    + + E+  L  A + +R  ++  L +  +  +  G++   D++
Sbjct: 2   TTARELMTPGAECVGENETLVDAARKMRDLDVGSLPICGEDNRLKGMLTDRDIV 55


>gi|332664913|ref|YP_004447701.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332333727|gb|AEE50828.1| putative signal transduction protein with CBS domains
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 133

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 8/124 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFR 274
                 +M S   +  V     +     ++S+   G V + DE    ++ GI+T+ D+  
Sbjct: 1   MKTIKQLMSSPVVMATV--ETTVGKLRELMSKYDVGAVPITDEGADAEIMGIVTDTDLRN 58

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                 +TL V  VM      +  D     A  L+ ++ I  L+V  D +K +GI+  +D
Sbjct: 59  VKD---STLPVMSVMSTKLCYVNNDDSTATAANLMLKNGIHHLLV-KDQEKIVGILSSVD 114

Query: 335 LLRF 338
           LL  
Sbjct: 115 LLEL 118


>gi|145615920|ref|XP_361156.2| conserved hypothetical protein [Magnaporthe oryzae 70-15]
 gi|145009706|gb|EDJ94362.1| conserved hypothetical protein [Magnaporthe oryzae 70-15]
          Length = 543

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/187 (20%), Positives = 64/187 (34%), Gaps = 17/187 (9%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++ L  P           P  S+ M       +AI +            V+H       
Sbjct: 66  SEVALDSPVTKRISL--KTPFVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSAEE 118

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G+   KL GI+T
Sbjct: 119 QADMVRKVKRYENGFILDPVVISRDTTVGEAKALKEKWGFGGFPVTETGKIGSKLLGIVT 178

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F  D+NT  V DVM+ +         L  A ++L +     L +VD     + 
Sbjct: 179 NRDI--QFEDDVNT-KVADVMVTDLITAPSGVTLAEANKILAKSKKGKLPIVDQDFNLVS 235

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 236 MISRSDL 242


>gi|153005808|ref|YP_001380133.1| signal transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029381|gb|ABS27149.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 141

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 42/116 (36%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNT 282
              +   + +   L+ A   + E   G + V+ E   L GI+T+ D+         D   
Sbjct: 7   MTRNAVTIGVDETLVAAARKMKELGVGALPVLAE-GTLTGILTDRDLTVRATAAGADPRR 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V D M        ED  L  A   +    +  L+V+D   +  G++   DL   
Sbjct: 66  TRVRDAMTPQVVACTEDDELAEAAHAMEACAVRRLIVLDREGRLCGMLSVEDLAGA 121



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V +VM +N   I  D  L  A + +++  +  L V+       GI+   DL 
Sbjct: 1   MRVREVMTRNAVTIGVDETLVAAARKMKELGVGALPVL-AEGTLTGILTDRDLT 53


>gi|73537854|ref|YP_298221.1| RpiR family transcriptional regulator [Ralstonia eutropha JMP134]
 gi|72121191|gb|AAZ63377.1| transcriptional regulator, RpiR family [Ralstonia eutropha JMP134]
          Length = 306

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
                 L++LE + +   + +   A   +   +        G S  +  +    LA  G 
Sbjct: 103 RIHADVLTALEVNRKLIDTDRMEQAARLLLGARMVYAFGMGGGSSIMADEARHRLARLGQ 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P                ++RDD+++  S SGS  E+ A    AR +   L+A+T+   S 
Sbjct: 163 PVASYQDGLLQKMVAATLSRDDVVLAFSASGSVPEMLASCDIAREYGAKLVAVTA-LGSP 221

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +A  AD++L  P           P+ S    L + D LA
Sbjct: 222 LAARADVLL--PVRTLETDFIFKPSASRYAMLLVLDVLA 258


>gi|87309361|ref|ZP_01091497.1| hypothetical protein DSM3645_22199 [Blastopirellula marina DSM
           3645]
 gi|87288000|gb|EAQ79898.1| hypothetical protein DSM3645_22199 [Blastopirellula marina DSM
           3645]
          Length = 272

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 55/129 (42%), Gaps = 7/129 (5%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             L     DVM        V  G  +     +++      + +VD+ +++ G++++ D+ 
Sbjct: 9   EKLSGSVRDVMTVKVHTATV--GTHVKIVAELMARHNLRRIIIVDDKKRVMGVVSQRDVV 66

Query: 274 RNFHK----DLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           R+  K    D     ++ ++ +  P  I  +  L  A  +L  + I  L VV   Q+  G
Sbjct: 67  RSMMKPEEPDELAREIQHLITRERPVTISPEVPLAKAALVLATNKIGCLPVVGLRQELRG 126

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 127 VLSTSDLIQ 135


>gi|218698106|ref|YP_002405773.1| putative Transcriptional regulator [Escherichia coli 55989]
 gi|237703963|ref|ZP_04534444.1| transcriptional regulator [Escherichia sp. 3_2_53FAA]
 gi|218354838|emb|CAV01973.1| putative Transcriptional regulator [Escherichia coli 55989]
 gi|226901875|gb|EEH88134.1| transcriptional regulator [Escherichia sp. 3_2_53FAA]
 gi|281181384|dbj|BAI57714.1| transcriptional regulator [Escherichia coli SE15]
 gi|315289190|gb|EFU48588.1| SIS domain protein [Escherichia coli MS 110-3]
 gi|323955430|gb|EGB51196.1| SIS domain-containing protein [Escherichia coli H263]
          Length = 274

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 4/143 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +    + L      L   L      A+ + ++    V I G+  S  +G  L   L   
Sbjct: 94  VVNESVQALQDTAKLLDRTLLEAATLALHQAQS----VQIYGVAASAILGEYLHYKLLRL 149

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+        +  +   ++++  ++ +S SGS+ +L  ++  AR+  + ++A+++  +
Sbjct: 150 GKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPR 209

Query: 150 SVVACHADIVLTLPKEPESCPHG 172
           S +A  +DI L   K       G
Sbjct: 210 SPLASLSDIQLVAAKPEGPLSAG 232


>gi|30264367|ref|NP_846744.1| CBS domain-containing protein [Bacillus anthracis str. Ames]
 gi|47529818|ref|YP_021167.1| CBS domain-containing protein [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187193|ref|YP_030445.1| CBS domain-containing protein [Bacillus anthracis str. Sterne]
 gi|165872079|ref|ZP_02216719.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167634583|ref|ZP_02392903.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|167638574|ref|ZP_02396850.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|170687433|ref|ZP_02878650.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|170707453|ref|ZP_02897907.1| CBS domain protein [Bacillus anthracis str. A0389]
 gi|177653263|ref|ZP_02935515.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190566870|ref|ZP_03019786.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|229604427|ref|YP_002868586.1| CBS domain protein [Bacillus anthracis str. A0248]
 gi|254684054|ref|ZP_05147914.1| CBS domain-containing protein [Bacillus anthracis str. CNEVA-9066]
 gi|254721888|ref|ZP_05183677.1| CBS domain-containing protein [Bacillus anthracis str. A1055]
 gi|254736402|ref|ZP_05194108.1| CBS domain-containing protein [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741440|ref|ZP_05199127.1| CBS domain-containing protein [Bacillus anthracis str. Kruger B]
 gi|254750878|ref|ZP_05202917.1| CBS domain-containing protein [Bacillus anthracis str. Vollum]
 gi|30259025|gb|AAP28230.1| CBS domain protein [Bacillus anthracis str. Ames]
 gi|47504966|gb|AAT33642.1| CBS domain protein [Bacillus anthracis str. 'Ames Ancestor']
 gi|49181120|gb|AAT56496.1| CBS domain protein [Bacillus anthracis str. Sterne]
 gi|164712210|gb|EDR17747.1| CBS domain protein [Bacillus anthracis str. A0488]
 gi|167513422|gb|EDR88792.1| CBS domain protein [Bacillus anthracis str. A0193]
 gi|167530035|gb|EDR92770.1| CBS domain protein [Bacillus anthracis str. A0442]
 gi|170127697|gb|EDS96570.1| CBS domain protein [Bacillus anthracis str. A0389]
 gi|170668628|gb|EDT19374.1| CBS domain protein [Bacillus anthracis str. A0465]
 gi|172081545|gb|EDT66617.1| CBS domain protein [Bacillus anthracis str. A0174]
 gi|190561861|gb|EDV15830.1| CBS domain protein [Bacillus anthracis Tsiankovskii-I]
 gi|229268835|gb|ACQ50472.1| CBS domain protein [Bacillus anthracis str. A0248]
          Length = 210

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|88799037|ref|ZP_01114618.1| nucleoside-diphosphate-sugar pyrophosphorylase [Reinekea sp.
           MED297]
 gi|88778264|gb|EAR09458.1| nucleoside-diphosphate-sugar pyrophosphorylase [Reinekea sp.
           MED297]
          Length = 359

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 7/116 (6%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTL 283
           + G     +        A+ +L+  +   + V D   +L G +T+GDI R   + L    
Sbjct: 3   YQGIQQHFLPPTASAEVAVELLNRLKIKLILVTDHKDRLLGTLTDGDIRRGLLRHLPLNA 62

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V + M   PKV+  D  +  A  L+ Q+ ++ +  +D+ Q+ +      DLL   
Sbjct: 63  PVNEFMETQPKVLGLDGSIRQARALMLQYGLNGVPQLDNEQRVV------DLLGLK 112



 Score = 38.0 bits (87), Expect = 2.0,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 1/44 (2%)

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
                 VA++LL +  I +++V D   + +G +   D+ R G++
Sbjct: 13  PTASAEVAVELLNRLKIKLILVTDHKDRLLGTLTDGDI-RRGLL 55


>gi|326928031|ref|XP_003210188.1| PREDICTED: inosine-5'-monophosphate dehydrogenase 2-like [Meleagris
           gallopavo]
          Length = 489

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/200 (18%), Positives = 69/200 (34%), Gaps = 23/200 (11%)

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSEND 203
            +   + I+L L            P  S+ M       +AIA+           N +   
Sbjct: 15  FLILQSLILLDLTSALTKRITLKTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPE- 73

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG-- 260
           F                        + P+V      + D     +   F  + + D G  
Sbjct: 74  FQANE--------VRKVKKYEQGFITDPVVLSPNDRVRDVFEAKARHGFCGIPITDNGKM 125

Query: 261 -QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVL 317
             KL GII+  DI     +  + L + ++M K  +  V  +  +L  A ++L++     L
Sbjct: 126 GGKLVGIISSRDI-DFLKESEHDLPLGEIMTKREDLVVAPDGVMLKEANEILQRSKKGKL 184

Query: 318 MVVDDCQKAIGIVHFLDLLR 337
            +V++  + + I+   DL +
Sbjct: 185 PIVNEDDELVAIIARTDLKK 204


>gi|254384623|ref|ZP_04999962.1| conserved hypothetical protein [Streptomyces sp. Mg1]
 gi|194343507|gb|EDX24473.1| conserved hypothetical protein [Streptomyces sp. Mg1]
          Length = 131

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 3/105 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               L  A  ++S +R G   V+D      GI+TE DI  +     D +  SV      N
Sbjct: 16  PAHSLRQAACLMSGRRVGAAVVLDPEHSGIGILTERDILNSIGAGHDPDRESVGAHTTNN 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +  L  A + +       L+V++D    +GIV   D++R
Sbjct: 76  VVFCTPEATLQEAAEAMAHGGFRHLIVLEDGG-PVGIVSVRDIIR 119


>gi|89900320|ref|YP_522791.1| signal-transduction protein [Rhodoferax ferrireducens T118]
 gi|89345057|gb|ABD69260.1| putative signal-transduction protein with CBS domains [Rhodoferax
           ferrireducens T118]
          Length = 153

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 6/106 (5%)

Query: 237 CPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
             L  A  ++ E   GC+ VVDE    + + G++T+ DI         D  TL VEDVM 
Sbjct: 22  TTLPGAARLMRENHVGCLVVVDEVEGKRIVVGLLTDRDIVTAVVASDLDPATLRVEDVMA 81

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +     ED  L   M  +R+  +  + VV    + +G+V   D+L
Sbjct: 82  TDLVTAREDDSLIDLMHTMRRKGVRRIPVVGTQDELLGVVTLDDVL 127



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLLR 337
             L+  ++  +N  V  + T L  A +L+R++++  L+VVD+    +  +G++   D++ 
Sbjct: 3   QRLTTGEICTRNVSVAFKATTLPGAARLMRENHVGCLVVVDEVEGKRIVVGLLTDRDIVT 62

Query: 338 F 338
            
Sbjct: 63  A 63


>gi|300711688|ref|YP_003737502.1| putative signal transduction protein with CBS domains
           [Halalkalicoccus jeotgali B3]
 gi|299125371|gb|ADJ15710.1| putative signal transduction protein with CBS domains
           [Halalkalicoccus jeotgali B3]
          Length = 265

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 4/114 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +    +  V     + D    ++E        V +G++++G I+  D+           
Sbjct: 14  QYMTRDVVTVSPDATVGDVAVRIAESEEHSGFPVCDGRRVEGFISARDLLLADE----DE 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  VM  +  V      +T A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 70  PIFKVMSTDLVVAHPRMKVTDAARVILRSGIQKLPVVDDAGNLVGIISNADVIR 123



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              V   M ++   +  D  +   A+++      S   V D  ++  G +   DLL
Sbjct: 9   KPRVNQYMTRDVVTVSPDATVGDVAVRIAESEEHSGFPVCD-GRRVEGFISARDLL 63


>gi|57238375|ref|YP_179503.1| nucleotidyltransferase family protein [Campylobacter jejuni RM1221]
 gi|57167179|gb|AAW35958.1| nucleotidyltransferase family protein [Campylobacter jejuni RM1221]
 gi|315058805|gb|ADT73134.1| D-glycero-D-manno-heptose 1-phosphate guanosyltransferase
           [Campylobacter jejuni subsp. jejuni S3]
          Length = 341

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     +++  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKISAKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|146277434|ref|YP_001167593.1| CBS domain-containing protein [Rhodobacter sphaeroides ATCC 17025]
 gi|145555675|gb|ABP70288.1| CBS domain containing protein [Rhodobacter sphaeroides ATCC 17025]
          Length = 144

 Score = 69.9 bits (170), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/120 (21%), Positives = 52/120 (43%), Gaps = 4/120 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DL 280
             S D +  V  G  +  A  +LS +R G V V  +G++  G+++E DI R   +     
Sbjct: 9   TKSDDGVVTVPPGSSVAQAAEVLSSRRIGAVVVSRDGKRPDGMLSERDIVRELGRRGPGC 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + +VE +M                MQ++ +     L V+    + +G++   D+++  +
Sbjct: 69  LSDTVESIMTSKIVTCACSDEADGIMQIMTEGRFRHLPVM-AEGEMVGLISIGDVVKARL 127


>gi|254467032|ref|ZP_05080443.1| CBS domain protein [Rhodobacterales bacterium Y4I]
 gi|206687940|gb|EDZ48422.1| CBS domain protein [Rhodobacterales bacterium Y4I]
          Length = 144

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 5/110 (4%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVED 287
             +     ++DA+ +++E+  G V V+  G KL GI TE    R      K   T  + D
Sbjct: 16  HTLPPEAMVVDALKLMAEEDVGSVLVM-SGGKLAGIFTERHYTRKVFLAGKTSPTTPLAD 74

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  +   +         M ++ + ++  L V+    +  GIV   DL++
Sbjct: 75  VMATDFYGVEPGQSAEACMAVMVEKHVRHLPVL-KDGELAGIVSIGDLMK 123


>gi|119873069|ref|YP_931076.1| sugar isomerase (SIS) [Pyrobaculum islandicum DSM 4184]
 gi|119674477|gb|ABL88733.1| hexulose-6-phosphate isomerase [Pyrobaculum islandicum DSM 4184]
          Length = 202

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 20/189 (10%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              + +    ++ +    F   +E++     ++++ G+G+SG +G   A  L   G  S+
Sbjct: 13  ANFILNALDKIKLDEVETFVKTIEEMYRQNKKILVLGVGRSGLVGRAFAMRLRHLGARSY 72

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   DL++ +S SG++  + A    A++    + AITS   S +A 
Sbjct: 73  VVGETITP-----SVEEGDLLVAISGSGTTQVVVAAAEAAKKMKARVAAITSYYDSPLAR 127

Query: 155 HADIVLTLPKEPESCPHG-------------LAPTTSAIMQLAI--GDALAIALLESRNF 199
            AD+VL +P   +                  L+P  +     A+   DA+   L++    
Sbjct: 128 VADLVLFVPGRTKLAAMDDYFARQILGIHEPLSPLGTLFEDTAMVVLDAVIAELMKRIGK 187

Query: 200 SENDFYVLH 208
           +E+D   LH
Sbjct: 188 NESDMAKLH 196


>gi|127512977|ref|YP_001094174.1| DNA-binding transcriptional regulator HexR [Shewanella loihica
           PV-4]
 gi|126638272|gb|ABO23915.1| transcriptional regulator, RpiR family [Shewanella loihica PV-4]
          Length = 284

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 65/162 (40%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            +++L+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMAALDTARQSMDTAAINKAVDILTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        +  D+++++S +G +  L  I   AR     +IAITS   S ++   
Sbjct: 161 DDVLMQRMSCINSSEGDVVVLISHTGRTKSLIDIARLARENGAAVIAITSR-NSPLSAEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL I D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVIVDVLATGFTLRRG 259


>gi|194337699|ref|YP_002019493.1| putative signal-transduction protein with CBS domains [Pelodictyon
           phaeoclathratiforme BU-1]
 gi|194310176|gb|ACF44876.1| putative signal-transduction protein with CBS domains [Pelodictyon
           phaeoclathratiforme BU-1]
          Length = 150

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                 ++K  C + +A+ I+   R   + V         GI+TE DI           +
Sbjct: 18  MQKDFQIIKGSCTVAEALQIMKRSRESGLIVEPRNEDDCYGIVTEKDILEKVIDPGEDVY 77

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    +     +  A++L+++ N+  L V+ +  K IGI++  D+L 
Sbjct: 78  RDPWNTPVFQIMSKPVISVNPGLRVKYALRLMKRSNVRRLTVM-ENNKIIGILNMTDVLH 136

Query: 338 F 338
            
Sbjct: 137 A 137


>gi|301630205|ref|XP_002944214.1| PREDICTED: inosine-5'-monophosphate dehydrogenase-like [Xenopus
           (Silurana) tropicalis]
          Length = 491

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 61/169 (36%), Gaps = 13/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +        ++  +    S V+H     
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGIGVIHKNMTAEQQAAEVAKVKRHESGVVH---DP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
            ++     ++  + +          V D G K+ GI+T  D+      D+    V  +M 
Sbjct: 97  VVITPEHTVLQVLELSENLGISGFPVCD-GGKVVGIVTSRDVRFETRYDV---KVSQIMT 152

Query: 291 KN--PKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                  + E   T    A  LL +H +  L+VV+D  +  G++   D+
Sbjct: 153 PREKLITVNEKGGTTPAQAKALLNRHKLERLLVVNDAFELKGLITVKDI 201


>gi|242373994|ref|ZP_04819568.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
 gi|242348348|gb|EES39950.1| CBS domain transcriptional regulator [Staphylococcus epidermidis
           M23864:W1]
          Length = 432

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
             K+    +   D++   + + ++     + D   + +E       +V++  KL GI+T 
Sbjct: 180 NQKIRKEILVVEDIVKPINELSVLFDYMKINDYKKLANETGHTRFPIVNKDFKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I      D     +  +M +NP  +     +     ++    I +L V ++ +KA+G+
Sbjct: 240 REIINMNEDD----ELGKIMTRNPLSVKLTNTVASCAHMMIWEGIELLPVTNNNKKAVGV 295

Query: 330 VHFLDLLR 337
           ++  D+L+
Sbjct: 296 INRQDVLK 303


>gi|224009930|ref|XP_002293923.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
           CCMP1335]
 gi|220970595|gb|EED88932.1| hypothetical protein THAPSDRAFT_264157 [Thalassiosira pseudonana
           CCMP1335]
          Length = 132

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 17/119 (14%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL---------- 283
                + +AI  L         VV E  +L G ++  D        L TL          
Sbjct: 15  SPQTSVDEAIATLLAAGVSGAPVV-EQLRLVGFVSSFDFLPREESGLVTLGEMEDSETAR 73

Query: 284 -----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
                SV+D+M +NP  +  + L+  A +++ +H + VL VVD      +G++   D++
Sbjct: 74  RILGQSVKDIMTRNPVSVNTNDLMKTAAEIMAKHRLHVLPVVDVHRGNLVGVISAKDVM 132



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D+M +NP  +   T +  A+  L    +S   VV +  + +G V   D L
Sbjct: 3   VSDLMTQNPFTLSPQTSVDEAIATLLAAGVSGAPVV-EQLRLVGFVSSFDFL 53


>gi|254516764|ref|ZP_05128822.1| FOG: CBS domain protein [gamma proteobacterium NOR5-3]
 gi|219674269|gb|EED30637.1| FOG: CBS domain protein [gamma proteobacterium NOR5-3]
          Length = 122

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
                  V     L DA+ I+ E R   + VVD+   L GI++E D  R+    +   S 
Sbjct: 1   MLPHPATVHRDASLSDAMAIIIENRVSGLCVVDDRGSLVGILSELDCLRSILGAVYNKSS 60

Query: 285 ---VEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V D M   N  V   D  +    Q +  +N     VV +  + IG +    LL+ 
Sbjct: 61  TGMVRDYMASDNLIVAHPDEDIVDVAQDMLMNNKRRRPVV-ENGRLIGQITCRQLLKA 117


>gi|159128905|gb|EDP54019.1| IMP dehydrogenase, putative [Aspergillus fumigatus A1163]
          Length = 546

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 68/193 (35%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D++L  P           P  S+ M       +AI +       +   N S  D     
Sbjct: 68  SDVILDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLGVIHHNCSPEDQA--- 122

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                  +        +     P+V      + +A  + ++  FG   V + G    KL 
Sbjct: 123 ------EMVRKVKRYENGFILDPVVLSPKATVGEAKALKAKWGFGGFPVTENGTLRSKLV 176

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G++T  DI   FH +L+   V  +M  +       T L  A  +LR      L +VD   
Sbjct: 177 GMVTSRDI--QFHTNLDD-PVTAIMSTDLVTAPAGTTLAEANDVLRSSKKGKLPIVDADG 233

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 234 NLVSLLSRSDLMK 246


>gi|150402972|ref|YP_001330266.1| signal transduction protein [Methanococcus maripaludis C7]
 gi|150034002|gb|ABR66115.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C7]
          Length = 303

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/104 (25%), Positives = 55/104 (52%), Gaps = 1/104 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + DA  +L +     + V+D G+KL G+++  D+     K L   +V  +M + 
Sbjct: 184 ITPEKTIRDAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEAVAKGLENENVTKLMAEK 242

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + ++  +  A+ L+ +HN+  L+++D+ + AIGI+   D+L
Sbjct: 243 IYTVSKNEKIYDALILMEKHNVGRLIILDNEEYAIGILTRTDIL 286



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 284 SVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV DV IK     I  +  +  A +LL   NIS + V+D  +K +G++   D+   
Sbjct: 171 SVGDVGIKKELIYITPEKTIRDAAKLLFDANISGIPVMD-GKKLLGVLSLHDVAEA 225



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 23/56 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
             + I  V     + DA+ ++ +   G + ++D  +   GI+T  DI       + 
Sbjct: 239 MAEKIYTVSKNEKIYDALILMEKHNVGRLIILDNEEYAIGILTRTDILNLIEGTIF 294


>gi|15789845|ref|NP_279669.1| inosine-5'-monophosphate dehydrogenase [Halobacterium sp. NRC-1]
 gi|169235566|ref|YP_001688766.1| CBS/parB domain-containing protein [Halobacterium salinarum R1]
 gi|10580239|gb|AAG19149.1| inosine-5'-monophosphate dehydrogenase [Halobacterium sp. NRC-1]
 gi|167726632|emb|CAP13417.1| CBS/parB domain protein [Halobacterium salinarum R1]
          Length = 272

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     + D    +SE       V D G+ ++G ++  D+      +L    
Sbjct: 18  YMTRDVATVSADDTVSDVAARISESDHNGFPVTD-GRHVEGFVSARDLLLADPDELLFK- 75

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              VM ++  V   +  +T A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 76  ---VMTEDLVVAHPEMDVTDAARVILRSGIQKLPVVDDAGNLVGIITNADVIR 125



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 16/80 (20%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + + +      + DA  ++       + VVD+   L GIIT  D+ R+  +      V
Sbjct: 77  MTEDLVVAHPEMDVTDAARVILRSGIQKLPVVDDAGNLVGIITNADVIRSQIERATPEKV 136

Query: 286 EDVM----IKNPKVILEDTL 301
             +M      +   I E+  
Sbjct: 137 GKLMRTLETIHGVSITEERR 156



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           H +  T +V D M ++   +  D  ++     + + + +   V D  +   G V   DLL
Sbjct: 7   HANGETPAVGDYMTRDVATVSADDTVSDVAARISESDHNGFPVTD-GRHVEGFVSARDLL 65


>gi|70989289|ref|XP_749494.1| IMP dehydrogenase [Aspergillus fumigatus Af293]
 gi|66847125|gb|EAL87456.1| IMP dehydrogenase, putative [Aspergillus fumigatus Af293]
          Length = 546

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 67/193 (34%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D+ L  P           P  S+ M       +AI +       +   N S  D     
Sbjct: 68  SDVTLDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLGVIHHNCSPEDQA--- 122

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                  +        +     P+V      + +A  + ++  FG   V + G    KL 
Sbjct: 123 ------EMVRKVKRYENGFILDPVVLSPKATVGEAKALKAKWGFGGFPVTENGTLRSKLV 176

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G++T  DI   FH +L+   V  +M  +       T L  A  +LR      L +VD   
Sbjct: 177 GMVTSRDI--QFHTNLDD-PVTAIMSTDLVTAPAGTTLAEANDVLRSSKKGKLPIVDADG 233

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 234 NLVSLLSRSDLMK 246


>gi|328955146|ref|YP_004372479.1| RpiR family transcriptional regulator [Coriobacterium glomerans
           PW2]
 gi|328455470|gb|AEB06664.1| transcriptional regulator, RpiR family [Coriobacterium glomerans
           PW2]
          Length = 289

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/154 (24%), Positives = 73/154 (47%), Gaps = 3/154 (1%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           +   R+G   +    V  ++R I+ EK  +  ++ ++   L  +   A  ++    G V+
Sbjct: 81  RQAPREGAGRISLEDVATSMRCILEEK--VLEIQDTVAN-LDPKEVEAAARLIQASGTVL 137

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G S  +    A  L   G  +    +++A+     +++  D I+ +S SG S  L 
Sbjct: 138 LVGVGTSLSVAQMAAVKLTHVGVRAVSPPSSDAATVLTQLLSDADCIVFVSNSGESRRLN 197

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            I+  A   +IP + IT ++K+ +A  AD VL +
Sbjct: 198 TIMDEAIDSAIPTVVITGDDKASLAQRADHVLAV 231


>gi|29827546|ref|NP_822180.1| oxidoreductase [Streptomyces avermitilis MA-4680]
 gi|29604646|dbj|BAC68715.1| putative oxidoreductase [Streptomyces avermitilis MA-4680]
          Length = 139

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD--LNT 282
               I +V+    +++   ++ E+  G V VV E  +L+G++T+ D+  R       ++ 
Sbjct: 9   MTSDITMVEPQTSVVEVARLMREQDIGAV-VVAENGRLRGLVTDRDLVVRALADGGSVDD 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +V          +  D  +  A+ L+    +  ++VV +  + +GIV   D
Sbjct: 68  RTVYSACSAELVSVAPDDDVDRAVYLMGARAVRRMLVV-EDGRLVGIVSLGD 118



 Score = 43.7 bits (102), Expect = 0.037,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V ++M  +  ++   T +    +L+R+ +I   +VV +  +  G+V   DL+
Sbjct: 5   VREIMTSDITMVEPQTSVVEVARLMREQDIGA-VVVAENGRLRGLVTDRDLV 55


>gi|253681839|ref|ZP_04862636.1| CBS domain protein [Clostridium botulinum D str. 1873]
 gi|253561551|gb|EES91003.1| CBS domain protein [Clostridium botulinum D str. 1873]
          Length = 432

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   VK    +     I+   +     VVD    + GIIT  D+ +   K+   + +
Sbjct: 194 MISNPIYVKYDDSVQKLKEIIRNTKHQRYPVVDNNMNVVGIITIKDLQK---KNDEKIFI 250

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M K    + E T +  A  ++    I +  VVD  +K IG+V   D+++ 
Sbjct: 251 KDIMSKELITVTEKTTVAYAAHVMGWEGIELCPVVD-GRKLIGVVSTEDIIKA 302



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +ED+MI NP  +  D  +    +++R        VVD+    +GI+   DL + 
Sbjct: 190 IEDIMISNPIYVKYDDSVQKLKEIIRNTKHQRYPVVDNNMNVVGIITIKDLQKK 243


>gi|70725188|ref|YP_252102.1| hypothetical protein SH0187 [Staphylococcus haemolyticus JCSC1435]
 gi|68445912|dbj|BAE03496.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 283

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/198 (17%), Positives = 77/198 (38%), Gaps = 12/198 (6%)

Query: 13  RKGHSL-MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           ++G++   K+ +++   +++        +L  + +   +     A E I   + +  I G
Sbjct: 82  QRGYAEIDKDYSIEEVTQTVF--HNNTKTLRDTERILSTENIKHAFELIVNSR-KTCIYG 138

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           IG S  I       L           + +        ++ +D++I +S SG + ++    
Sbjct: 139 IGASALIAQDFKQKLTRIDYWCDVGSSFDEQVTLSANLSSEDVVIAISSSGQTKDIVNST 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
             A+     +I+IT    + ++  +D+ L +    ++   G    +S I  L+I D L I
Sbjct: 199 QLAKEKGAKVISITKYGDNPISNLSDVQLFVSSSEKAKRSGA--MSSRIAMLSIIDILYI 256

Query: 192 ALLESRNFSENDFYVLHP 209
            +        ND+     
Sbjct: 257 CIA------SNDYLSNRQ 268


>gi|17229406|ref|NP_485954.1| hypothetical protein all1914 [Nostoc sp. PCC 7120]
 gi|17131004|dbj|BAB73613.1| all1914 [Nostoc sp. PCC 7120]
          Length = 1123

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 25/142 (17%)

Query: 221 SDVMHSGDSIPL-VKIGCPLIDAITILSEKR--------------------FGCVAVVDE 259
            ++ H  D  PL +     +IDAI +++++                          +V +
Sbjct: 18  HNLYHLIDRHPLTIDPDSYVIDAIRLMNQQGNSSQSTSINSPGTYSNKNSTQTSYVLVVK 77

Query: 260 GQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNIS 315
              L GI TE D+ R      DL+ L + +VM +    +     L    A+ LL QH I 
Sbjct: 78  AGNLLGIFTERDLVRLTASKFDLSDLKISEVMTQPVITMKMSNFLDIFTALSLLHQHQIR 137

Query: 316 VLMVVDDCQKAIGIVHFLDLLR 337
            L +++D ++ IGIV    LL+
Sbjct: 138 HLPILNDREQLIGIVSAASLLQ 159


>gi|298675657|ref|YP_003727407.1| 6-phospho 3-hexuloisomerase [Methanohalobium evestigatum Z-7303]
 gi|298288645|gb|ADI74611.1| 6-phospho 3-hexuloisomerase [Methanohalobium evestigatum Z-7303]
          Length = 202

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 61/168 (36%), Gaps = 20/168 (11%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
             +E I      + + G G+SG +G   A  L   G   + V  +         +  +D+
Sbjct: 37  KMIEDIMGADN-IFLMGAGRSGLVGKAFAMRLMHLGYSVYVVGESTTP-----AVKENDV 90

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP---- 170
           +I +S SG +  +  +   A+     L+ +TS   S +   +D V+ +P   ++      
Sbjct: 91  VIAISGSGETRSVADLGKIAKDIGSTLVTVTSNEDSTLGNLSDTVVEVPGRTKTQSGEYL 150

Query: 171 ----------HGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
                          T+  I  +   DA+   L+     SE +    H
Sbjct: 151 ERHMRGEYDYLTPLGTSFEISTMVFMDAVIAELIHITGTSEAELKSRH 198


>gi|16272110|ref|NP_438312.1| hypothetical protein HI0143 [Haemophilus influenzae Rd KW20]
 gi|2507342|sp|P44540|Y143_HAEIN RecName: Full=Uncharacterized HTH-type transcriptional regulator
           HI_0143
 gi|1573099|gb|AAC21815.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
          Length = 288

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 73/196 (37%), Gaps = 16/196 (8%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLESRNFSENDFY 205
              L++     E D  
Sbjct: 260 YALLVQ----GEEDIA 271


>gi|124028097|ref|YP_001013417.1| sugar phosphate isomerase [Hyperthermus butylicus DSM 5456]
 gi|123978791|gb|ABM81072.1| predicted sugar phosphate isomerase [Hyperthermus butylicus DSM
           5456]
          Length = 201

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/200 (19%), Positives = 72/200 (36%), Gaps = 20/200 (10%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           ++   +++      +  +   L  E        +E       ++++ G G+SG +G   A
Sbjct: 2   IEYVRKTMKEIVMFIDKVIEKLNEEQVSLMLDVLENAYRQGSKILVMGAGRSGLVGRAFA 61

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G   + +            I   D+++ +S SG +  +      A++    +IA
Sbjct: 62  MRLMHLGFNVYVLGETITP-----SIGERDVVVAISGSGRTQLIVTAAEAAKKVKATIIA 116

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIMQLA--IGDA 188
           ITS   S +   ADIV+ +P   +  P               LAP  +     A    D 
Sbjct: 117 ITSYPDSPLGRLADIVVEIPGRTKLAPDIDYFARQILGIHEPLAPLGTLFEDTALVFLDG 176

Query: 189 LAIALLESRNFSENDFYVLH 208
           + + L+     SE D    H
Sbjct: 177 VVVELMHRLGKSEVDLRARH 196


>gi|65321670|ref|ZP_00394629.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
 gi|254757794|ref|ZP_05209821.1| CBS domain-containing protein [Bacillus anthracis str. Australia
           94]
          Length = 211

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 181 VVKDTKQGLEVIGRITKTNITRA 203


>gi|332360321|gb|EGJ38133.1| CBS domain protein [Streptococcus sanguinis SK49]
          Length = 209

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M + P  K   ++  +  A  +L+   I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKNMNILEAAAVLQDFAIDSLPVVDKDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.047,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|297564761|ref|YP_003683733.1| RpiR family transcriptional regulator [Meiothermus silvanus DSM
           9946]
 gi|296849210|gb|ADH62225.1| transcriptional regulator, RpiR family [Meiothermus silvanus DSM
           9946]
          Length = 279

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 41/205 (20%), Positives = 67/205 (32%), Gaps = 23/205 (11%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRV 67
                +   +      V    R ++ E R L ++               VE+I   + R+
Sbjct: 83  LPKQEKPTSAQSTADYVYNTARQVLDETRRLMNV---------DLLEEVVERILKAR-RI 132

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
              G+G +G      A  L   G  +       ++      +   DL   +S SGSS + 
Sbjct: 133 DFYGVGNAGTTAQDFAQKLQRLGCAAIAYPDPHSAAVSAATLGPKDLAFGISVSGSSIDT 192

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
              L  A+      +A+T   +S +   AD VL         P       + I QL + D
Sbjct: 193 VKALEQAKLAGAYTVAVTRGARSPITRFADAVLLTSAPES--PLTRGSMGAKISQLMLLD 250

Query: 188 ALAIALLESRNFSENDFYVLHPGGK 212
            L         F+     + HP G 
Sbjct: 251 FL---------FTRT--ALRHPKGA 264


>gi|283851809|ref|ZP_06369086.1| putative signal transduction protein with CBS domains
           [Desulfovibrio sp. FW1012B]
 gi|283572725|gb|EFC20708.1| putative signal transduction protein with CBS domains
           [Desulfovibrio sp. FW1012B]
          Length = 668

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           V  G  L     ++ + + G V V +    + GI+T+ D+ R   + L  +  VE +M  
Sbjct: 185 VTRGMDLRQTARVMEDGQVGSVVVREASGLVIGIVTDRDLRRAVARGLALSAPVETLMSA 244

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  DT     +  +    I  L+V     +  G+V   DLL
Sbjct: 245 PVADIDADTPCFEGLIRMTGAGIRHLLVT-RDGEPSGMVTVSDLL 288



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 25/70 (35%), Gaps = 7/70 (10%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +GD        L T    +V  +    +     L    +++    +  ++V +     IG
Sbjct: 165 DGD-------YLFTRLAGEVASRTLAGVTRGMDLRQTARVMEDGQVGSVVVREASGLVIG 217

Query: 329 IVHFLDLLRF 338
           IV   DL R 
Sbjct: 218 IVTDRDLRRA 227


>gi|242239565|ref|YP_002987746.1| DNA-binding transcriptional regulator HexR [Dickeya dadantii
           Ech703]
 gi|242131622|gb|ACS85924.1| transcriptional regulator, RpiR family [Dickeya dadantii Ech703]
          Length = 289

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 62/167 (37%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ LE +         + AV+ +   + ++   G G S  +     +       P  + 
Sbjct: 102 AMAGLEYAKSNIDVQAVNRAVDLLTQAR-KISFFGFGASAAVAHDAMNKFFRFNIPVVYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        +  D+++++S +G +  +  +   AR     +IAITS   S +A  A
Sbjct: 161 DDLVMQRMGCMNSSEGDVVVLISHTGRTKNMVEMARLARENDATVIAITS-GGSPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + L +    ++  +   P  S I QL + D LA      R     D
Sbjct: 220 SLTLQVEVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|153825965|ref|ZP_01978632.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|149740373|gb|EDM54509.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
          Length = 282

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTDAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAQAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|163848439|ref|YP_001636483.1| isocitrate dehydrogenase [Chloroflexus aurantiacus J-10-fl]
 gi|222526367|ref|YP_002570838.1| isocitrate dehydrogenase, NADP-dependent [Chloroflexus sp.
           Y-400-fl]
 gi|163669728|gb|ABY36094.1| isocitrate dehydrogenase, NADP-dependent [Chloroflexus aurantiacus
           J-10-fl]
 gi|222450246|gb|ACM54512.1| isocitrate dehydrogenase, NADP-dependent [Chloroflexus sp.
           Y-400-fl]
          Length = 600

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 44/106 (41%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     L +    +  +    V V  +     GI+T  D+ +      + ++ L+V D+ 
Sbjct: 490 VPAEASLRETSIYMRGRGIHSVIVKPDASGEWGIMTMRDVLKKVVREGRAIDGLTVGDLT 549

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +    +  DT +T    L+ + NI  L V  +  + +GI+   D+
Sbjct: 550 SRPLLSVSPDTPITECAALMVERNIRRLAVF-ENGEPVGIISETDI 594



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 14/67 (20%), Positives = 25/67 (37%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R   +     SV  VM +    +  +  L      +R   I  ++V  D     GI+ 
Sbjct: 466 LRRADGRVYPHGSVGAVMTRAVVAVPAEASLRETSIYMRGRGIHSVIVKPDASGEWGIMT 525

Query: 332 FLDLLRF 338
             D+L+ 
Sbjct: 526 MRDVLKK 532



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V    P+ +   ++ E+    +AV  E  +  GII+E DIF +  +
Sbjct: 556 VSPDTPITECAALMVERNIRRLAVF-ENGEPVGIISETDIFSHVAE 600


>gi|225016554|ref|ZP_03705746.1| hypothetical protein CLOSTMETH_00461 [Clostridium methylpentosum
           DSM 5476]
 gi|224950663|gb|EEG31872.1| hypothetical protein CLOSTMETH_00461 [Clostridium methylpentosum
           DSM 5476]
          Length = 502

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 64/185 (34%), Gaps = 17/185 (9%)

Query: 155 HADIVLTLPKEPESCPHGLA-----PTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P          A     P  SAIMQ    D +AIAL       F      + 
Sbjct: 28  PANVNLQTPVVKFQKGEEPALKMNIPLVSAIMQSVSDDNMAIALAIEGGISFIYGSQSIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
                +  +    +  + S  +   +K    L D + +  +     +AV ++     KL 
Sbjct: 88  SEAAMVARVKNYKAGFVRSDSN---IKPDQTLQDILELKEKNGHSTIAVTEDGSPNGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           G++T  D      +      V + M          +   L  A  ++  H ++ L VVDD
Sbjct: 145 GVVTGRDYR--VSRMELDTKVCEFMTPFSKLIYATQGVTLKEANDIIWDHKLNSLPVVDD 202

Query: 323 CQKAI 327
            Q  +
Sbjct: 203 KQNLL 207


>gi|20808780|ref|NP_623951.1| transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
 gi|20517427|gb|AAM25555.1| Transcriptional regulator [Thermoanaerobacter tengcongensis MB4]
          Length = 285

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 5/173 (2%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           N  +   ++ I  E     ++ ++++     +   AV+ I   + ++   G+G SG+   
Sbjct: 94  NDPLDVLVQKITTENT--LAISNTVKLLSMSELEKAVDAIINAR-KIQFYGVGASGYTAL 150

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                    G        A         +T  D+ + +S+SGS+ +       A+     
Sbjct: 151 DAKYKFMRLGLNVDANLDAHIQAISAVSLTDKDVAVGISFSGSTKDTVETCRLAKEAGAR 210

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           +IAIT+  +S +   ADIVL    +      G    TS I QL I D L  A+
Sbjct: 211 VIAITNYARSPITSVADIVLLTSAKETPLRSGAL--TSKIAQLHILDILYTAV 261


>gi|319760647|ref|YP_004124585.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           vafer str. BVAF]
 gi|318039361|gb|ADV33911.1| inosine-5'-monophosphate dehydrogenase [Candidatus Blochmannia
           vafer str. BVAF]
          Length = 489

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 62/166 (37%), Gaps = 10/166 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLES--RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +     F   +  ++    ++  +    S V+    + 
Sbjct: 42  NIPIVSAAMDTVTESNLAIAIAQEGGVGFIHKNMSLIEQINEVSRVKRHESGVV---TNP 98

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V     L++         F    VV    +L GI+T  D+   F  +LNTL V +VM 
Sbjct: 99  QCVSPNTTLLEVKERTRRNGFAGYPVVVNKNELVGIVTSRDVR--FIDNLNTL-VSNVMT 155

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  + E     + +  + +  +  +++VD      G++   D
Sbjct: 156 PKAQLVTVCEKKDREIVLAKMHEKRVEKILLVDSSFHLKGMITAKD 201


>gi|296810912|ref|XP_002845794.1| inosine-5'-monophosphate dehydrogenase [Arthroderma otae CBS
           113480]
 gi|238843182|gb|EEQ32844.1| inosine-5'-monophosphate dehydrogenase [Arthroderma otae CBS
           113480]
          Length = 551

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 53/267 (19%), Positives = 95/267 (35%), Gaps = 37/267 (13%)

Query: 83  ASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           A T+ S G  + FV  ++A           D++     SG   ++K +L   +R      
Sbjct: 11  ARTVTSLGGRTEFVDCSKAL----------DVLKTEYTSGDGLDIKELLDSNKRG----- 55

Query: 143 AITSENKSVVA-----CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           A+T  +  V+        +D+ L  P       +   P  S+ M      ++AI +    
Sbjct: 56  ALTYNDFLVLPGYIGFPASDVTLQSPVTKRISLN--VPLLSSPMDTVTEHSMAIHMALLG 113

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGC 253
                   V+H              V            ++     + +   +  +  FG 
Sbjct: 114 GLG-----VIHHNCSADEQAEMVRKVKRYENGFILDPVVISPKTTVAEVKELKQKWGFGG 168

Query: 254 VAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
             V + G    KL GI+T  DI   FH +++   V  VM  +       T L  A ++LR
Sbjct: 169 FPVTENGDLRSKLVGIVTSRDI--QFHPEMSD-PVTAVMSTDLVTAPAGTTLAEANEVLR 225

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 L +VD+    + ++   DL++
Sbjct: 226 ASKKGKLPIVDEAGNIVSLLSRSDLMK 252


>gi|108805946|ref|YP_645883.1| peptidase M50 [Rubrobacter xylanophilus DSM 9941]
 gi|108767189|gb|ABG06071.1| peptidase M50 [Rubrobacter xylanophilus DSM 9941]
          Length = 376

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/124 (18%), Positives = 46/124 (37%), Gaps = 2/124 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              DVM +      V         +  +         VVDE  +L G++T  +I    H 
Sbjct: 239 TVRDVMGTRRRTETVTPWHTFGQVLDSVIHGYQTDFPVVDEDGRLVGMLTRNEIMSAAHS 298

Query: 279 DLNTLSVEDVMIKNPKVILEDTLL-TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 V  +M      I  +  L     +LL++  +  + VV +  + +G++   D+ +
Sbjct: 299 PDRFSEVRQIMRTEFPTISPEADLFAEGQKLLQESGLRAIPVV-EDGELVGMLTVEDMSQ 357

Query: 338 FGII 341
             ++
Sbjct: 358 AALL 361


>gi|304314460|ref|YP_003849607.1| 3-hexulose-6-phosphate isomerase [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587919|gb|ADL58294.1| predicted 3-hexulose-6-phosphate isomerase [Methanothermobacter
           marburgensis str. Marburg]
          Length = 194

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 32/180 (17%), Positives = 64/180 (35%), Gaps = 20/180 (11%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
           ++++     +    + +I   +  V I G G+S  +G   A  L   G   + V      
Sbjct: 17  NAIEKVEESELEQMITRIMDARA-VFIVGTGRSELVGKAFAMRLMHLGFTVYVVGDVTTP 75

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I+ +D +I +S SG +  +      ++     +IA+T+  +S +  H+D+V+ +
Sbjct: 76  -----AISDEDCLIAISGSGETKTVTLAATTSKSVGATVIAVTATPQSTLTEHSDVVICI 130

Query: 163 PKEPES------------CPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           P + +                 L P  +          D L    +      E D    H
Sbjct: 131 PSKTKEAWKYYTSGVLRGDYDDLTPMGTLFEDSTHLFLDGLIAEFMAILGKKERDLKERH 190


>gi|293393430|ref|ZP_06637741.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291424031|gb|EFE97249.1| RpiR family transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 278

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAMQISAE---QLDKAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFTEQLSMVKPKDVVIAISYSPYAKEALELVELGAKQGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|153952158|ref|YP_001397586.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
 gi|152939604|gb|ABS44345.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           doylei 269.97]
          Length = 341

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PHSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALIGGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     ++L  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEELLKLSAKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|288905948|ref|YP_003431170.1| hypothetical protein GALLO_1755 [Streptococcus gallolyticus UCN34]
 gi|325978914|ref|YP_004288630.1| acetoin utilization protein AcuB [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
 gi|288732674|emb|CBI14246.1| conserved hypothetical protein [Streptococcus gallolyticus UCN34]
 gi|325178842|emb|CBZ48886.1| acetoin utilization protein AcuB [Streptococcus gallolyticus subsp.
           gallolyticus ATCC BAA-2069]
          Length = 219

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  ++ E+    + V+ E  KL GI+TE  +                +  L
Sbjct: 14  VSPDTTVAHAADMMREQGLRRLPVI-ENDKLVGIVTERTMAEASPSKATTLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + DVMI++   +     L  A+  + ++ + ++ VV +  +  G++   D+ + 
Sbjct: 73  NKTKIRDVMIRDVVTVSPYASLEDAIYTMMKNRVGIVPVV-ESGQVYGVITDKDVFKA 129



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  DT +  A  ++R+  +  L V+++  K +GIV 
Sbjct: 1   MAVKDFMTKKVVYVSPDTTVAHAADMMREQGLRRLPVIEND-KLVGIVT 48



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI  + + R G V VV E  ++ G+IT+ D+F+ F
Sbjct: 81  MIRDVVTVSPYASLEDAIYTMMKNRVGIVPVV-ESGQVYGVITDKDVFKAF 130


>gi|238756309|ref|ZP_04617623.1| RpiR-family transcriptional regulator [Yersinia ruckeri ATCC 29473]
 gi|238705462|gb|EEP97865.1| RpiR-family transcriptional regulator [Yersinia ruckeri ATCC 29473]
          Length = 297

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 38/175 (21%), Positives = 67/175 (38%), Gaps = 12/175 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +Q A+ ++++E   L SLE              V+ ++  + R+ I G+G SG     
Sbjct: 115 SKLQSAINNVLSETLNLLSLE---------CVEQVVKLLRPAE-RICIFGVGSSGITAED 164

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
             + L   G            +    ++   D+ I +S SG+S E    L  A+      
Sbjct: 165 AKAKLMRIGLRVDAATNNHFMYMQASLMKAGDVAIGISHSGTSAETVEALRLAKLAGATT 224

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +A+T    S +   AD VL                 + I QL + D +   L+++
Sbjct: 225 VALTHNMGSRITELADYVLINGNRQGKLQGDSI--GTKIAQLFVLDLIYALLVKA 277


>gi|218779500|ref|YP_002430818.1| hypothetical protein Dalk_1652 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218760884|gb|ACL03350.1| CBS domain containing protein [Desulfatibacillum alkenivorans
           AK-01]
          Length = 432

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 2/109 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +     + D   IL +K    + V  E  KL G+I+  D+ +   +      V
Sbjct: 315 MSFPVETIDAKTSMKDTAEILKKKAISGMPVT-EEGKLVGVISRRDVNKIKKQSQWRAPV 373

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +  M  +         +  A +++ +H++  L VVDD  + IGI    D
Sbjct: 374 KAFMSTDMITAPPHMSVPKAARIMVKHDVGRLPVVDD-GELIGIFTRSD 421



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + D+M    + I   T +    ++L++  IS + V ++  K +G++   D+ +  
Sbjct: 311 IGDLMSFPVETIDAKTSMKDTAEILKKKAISGMPVTEE-GKLVGVISRRDVNKIK 364



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 19/57 (33%), Gaps = 1/57 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                A         +        +  A  I+ +   G + VVD+  +L GI T  D
Sbjct: 366 QSQWRAPVKAFMSTDMITAPPHMSVPKAARIMVKHDVGRLPVVDD-GELIGIFTRSD 421


>gi|56964526|ref|YP_176257.1| acetoin utilization protein AcuB [Bacillus clausii KSM-K16]
 gi|56910769|dbj|BAD65296.1| acetoin utilization protein AcuB [Bacillus clausii KSM-K16]
          Length = 217

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 40/109 (36%), Gaps = 9/109 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--------NFHKDLNTLSVED 287
              + DAI ++       + + +    + GI+++ DI                    V  
Sbjct: 17  TDTIEDAIALMESASIRHIPITNGHTAVVGIVSDRDIRDIRPSTLSVTKEATDFLQPVTK 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M         D  +    +L  Q+ +  L VVD+  + +G++   D+L
Sbjct: 77  IMSTPVLTAHPDDDVQEVARLFFQNRVGCLPVVDND-RLVGLITESDML 124



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 23/53 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ++ +M  N   +     +  A+ L+   +I  + + +     +GIV   D+
Sbjct: 1   MKIKTIMRTNVPTLTNTDTIEDAIALMESASIRHIPITNGHTAVVGIVSDRDI 53



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 9/85 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMI 290
                + +   +  + R GC+ VVD   +L G+ITE D+  +  K L      S+ +V +
Sbjct: 86  HPDDDVQEVARLFFQNRVGCLPVVDND-RLVGLITESDMLYSLTKLLGADQPSSIIEVCV 144

Query: 291 KNPKVILEDTLLTVAMQLLRQHNIS 315
            N        L  VA  + ++  I+
Sbjct: 145 HN----RPGQLADVAA-VFKKERIN 164


>gi|17546282|ref|NP_519684.1| hypothetical protein RSc1563 [Ralstonia solanacearum GMI1000]
 gi|83748285|ref|ZP_00945310.1| CBS domain containing protein [Ralstonia solanacearum UW551]
 gi|207724039|ref|YP_002254437.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
           solanacearum MolK2]
 gi|207742932|ref|YP_002259324.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
           solanacearum IPO1609]
 gi|300703865|ref|YP_003745467.1| hypothetical protein RCFBP_11559 [Ralstonia solanacearum CFBP2957]
 gi|17428579|emb|CAD15265.1| probable cystathionine-beta-synthase domain harboring protein
           [Ralstonia solanacearum GMI1000]
 gi|83725017|gb|EAP72170.1| CBS domain containing protein [Ralstonia solanacearum UW551]
 gi|206589247|emb|CAQ36209.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
           solanacearum MolK2]
 gi|206594327|emb|CAQ61254.1| cystathionine-beta-synthase domain harboring protein [Ralstonia
           solanacearum IPO1609]
 gi|299071528|emb|CBJ42852.1| conserved protein of unknown function, CBS
           (cystathionine-beta-synthase) domain [Ralstonia
           solanacearum CFBP2957]
          Length = 151

 Score = 69.5 bits (169), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 62/126 (49%), Gaps = 7/126 (5%)

Query: 218 VCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD----I 272
           +  SD++H  G+++  V     L  A+  ++E   G + VV E  +L G++T  +    +
Sbjct: 1   MKVSDILHVKGNTLYTVAPETKLQVAVQTMAEYDIGSL-VVMEYGELVGMLTFREIILVL 59

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            RN  K  +  ++  VM  +P     +T +    +++ + +   L V+D+ +  +G++ F
Sbjct: 60  ARNNGKVDDGTTIRKVMDDHPLTCTPETEVNEVRRMMLERHARYLPVLDN-RTLMGVISF 118

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 119 YDVAKA 124


>gi|325104882|ref|YP_004274536.1| 6-phospho 3-hexuloisomerase [Pedobacter saltans DSM 12145]
 gi|324973730|gb|ADY52714.1| 6-phospho 3-hexuloisomerase [Pedobacter saltans DSM 12145]
          Length = 193

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 10/170 (5%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
            L   L+++    + +      R+ + G+G+SG   S  A  L   G  +  V    A  
Sbjct: 25  RLANNLNYEDITLLSEYLKTSNRIFVKGVGRSGLALSGFAMRLIHLGFHASIVGEISAP- 83

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
                I+  DL++V S SG++  +      A+     ++  T++  S +A  +D  + LP
Sbjct: 84  ----AISEGDLLLVASGSGTTHSVIKAAQKAKAEGANVVCYTTDENSELAKISDQTILLP 139

Query: 164 KEPESCPHGLAPT---TSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
              +             +   Q    + DA+   L +         +  H
Sbjct: 140 ASSKYDYGEKVSKQYAGTLFEQALSLLCDAIFHTLWQQSGQKPQIMFKRH 189


>gi|167648960|ref|YP_001686623.1| signal-transduction protein [Caulobacter sp. K31]
 gi|167351390|gb|ABZ74125.1| putative signal-transduction protein with CBS domains [Caulobacter
           sp. K31]
          Length = 144

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTLSVEDVMIKN 292
               +     +++    G V +V E  K+ G++T+ DI  R   +       + + M + 
Sbjct: 16  PTDTVRKVAQVMAHVETGAVPIV-EDGKVIGLVTDRDIVLRVVAEGRSFDSPISEAMSEG 74

Query: 293 PKV-ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +LED +L  A   +  H I  L+V+D   K  GI+   D+ +
Sbjct: 75  EVYSVLEDDVLADATAKMASHQIRRLVVLDGSGKLTGILSLGDVAK 120



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/75 (21%), Positives = 32/75 (42%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G  F        S   +  V     L DA   ++  +   + V+D   KL GI++ GD+ 
Sbjct: 60  GRSFDSPISEAMSEGEVYSVLEDDVLADATAKMASHQIRRLVVLDGSGKLTGILSLGDVA 119

Query: 274 RNFHKDLNTLSVEDV 288
           +++       ++E++
Sbjct: 120 KDYGAKQVGKTLEEI 134


>gi|71279189|ref|YP_269000.1| DNA-binding transcriptional regulator HexR [Colwellia
           psychrerythraea 34H]
 gi|71144929|gb|AAZ25402.1| transcriptional regulator, RpiR family [Colwellia psychrerythraea
           34H]
          Length = 282

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 67/166 (40%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SLE + +   +   + +V+ +     ++   G+G S  +     +       P  +  
Sbjct: 103 MASLELARKSLDANDINRSVDVLTQA-NKISFFGLGASAIVAHDAQNKFFRFNVPVVYFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                        + D+++V+S +G +  L  +   A+     +I IT+   + +A    
Sbjct: 162 DILMQRMSAINSRQGDVVVVISHTGRTKSLVEVASLAKENDATVIGITT-TDTPLAKECS 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           IVL++    ++  +   P +S I QLA+ D LA      R     D
Sbjct: 221 IVLSVDVSEDTDLY--MPMSSRIAQLALIDVLATGFTLRRGSKFRD 264


>gi|298673998|ref|YP_003725748.1| CBS domain-containing membrane protein [Methanohalobium evestigatum
           Z-7303]
 gi|298286986|gb|ADI72952.1| CBS domain containing membrane protein [Methanohalobium evestigatum
           Z-7303]
          Length = 258

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 13/104 (12%)

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDLNTLSVEDVMIKN 292
            + E   G V VV E +K+ GI+TE DI ++                +  L +ED+M + 
Sbjct: 151 QMLENNIGRVPVV-EDEKIVGIVTEKDIAKSMRAFRDLVAGNKQDTRIRNLIIEDIMTRG 209

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K +  +T  +  + ++ + NI  + V++   + +GI+   +++
Sbjct: 210 AKTVYTNTPTSDVVNMMIEDNIGGVPVLNLEDELVGIITRRNII 253



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 10/173 (5%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
           +  S    +    +    L   D   + +L  R+ +E        G K  +    A+ V 
Sbjct: 17  DTTSHALDVMEKKNTRRLLVTHDDKIMGVLTMRSLNEE-LGTRKKGNKPASSLHVATAVS 75

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
              D    V     + DAIT++  K  G V VV +   + G +T  ++ +N H D     
Sbjct: 76  ---DDYSKVLPDTDIKDAITLMKNK--GKVIVVTDNDDIYGWVTPEELLKNNHFDGY--- 127

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++M K+P        +      + ++NI  + VV+D  K +GIV   D+ +
Sbjct: 128 AGEIMQKDPLKANPSDRVIHIRHQMLENNIGRVPVVEDE-KIVGIVTEKDIAK 179



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 45/127 (35%), Gaps = 10/127 (7%)

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND--FYVLHPG 210
           A  +D V+ +  +      G  P         + D   + ++  ++ +++   F  L  G
Sbjct: 139 ANPSDRVIHIRHQMLENNIGRVP--------VVEDEKIVGIVTEKDIAKSMRAFRDLVAG 190

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K  T                 V    P  D + ++ E   G V V++   +L GIIT  
Sbjct: 191 NKQDTRIRNLIIEDIMTRGAKTVYTNTPTSDVVNMMIEDNIGGVPVLNLEDELVGIITRR 250

Query: 271 DIFRNFH 277
           +I  +  
Sbjct: 251 NIIESMA 257



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+++M   P  I +    + A+ ++ + N   L+V  D  K +G++    L
Sbjct: 1   MQVKEIM-VEPPTIDKSDTTSHALDVMEKKNTRRLLVTHDD-KIMGVLTMRSL 51


>gi|219852758|ref|YP_002467190.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219547017|gb|ACL17467.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 261

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 44/113 (38%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     + +    + +       VVD   ++ G I   D+         +  
Sbjct: 9   YMTYDVVTVDAQGIVREVFEKIRKTNHDGFPVVD-NGEVVGYIAARDLLFA----HPSTQ 63

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V +VM  +  V   D  +  A +++ +  I  L VVD+    +GIV   D++R
Sbjct: 64  VREVMSSHLIVADPDMSINDAARVIFRSGIQKLPVVDEKNHLVGIVSNSDVIR 116



 Score = 39.5 bits (91), Expect = 0.72,   Method: Composition-based stats.
 Identities = 12/66 (18%), Positives = 27/66 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +      + DA  ++       + VVDE   L GI++  D+ R+  + ++   V
Sbjct: 68  MSSHLIVADPDMSINDAARVIFRSGIQKLPVVDEKNHLVGIVSNSDVIRSQIEHVSPEKV 127

Query: 286 EDVMIK 291
            + +  
Sbjct: 128 FNFITT 133



 Score = 36.4 bits (83), Expect = 7.3,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++   V+D M  +   +    ++    + +R+ N     VVD+  + +G +   DLL
Sbjct: 1   MDKKRVKDYMTYDVVTVDAQGIVREVFEKIRKTNHDGFPVVDN-GEVVGYIAARDLL 56


>gi|205356814|ref|ZP_03223571.1| putative sugar phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni CG8421]
 gi|205345306|gb|EDZ31952.1| putative sugar phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni CG8421]
          Length = 341

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     +++  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKISAKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|148927031|ref|ZP_01810706.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni CG8486]
 gi|145844999|gb|EDK22097.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni CG8486]
          Length = 341

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     +++  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKISAKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|303249417|ref|ZP_07335639.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
 gi|302489177|gb|EFL49147.1| putative signal transduction protein with CBS domains
           [Desulfovibrio fructosovorans JJ]
          Length = 256

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMI 290
           V    P+ +A+ +L E+    + VVD    L G++TE ++      D         D+M 
Sbjct: 79  VAKDLPVSEAVKLLLERAARHLPVVDFSGSLLGLVTEKELVDALAVDFMVEDALCSDLMH 138

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +P  +  D  +  A+ L+R+ N   +M VD   K  GI+   D+L
Sbjct: 139 HDPVTLPADRTVREALTLMREKNADCVMAVD-AGKPAGILSERDVL 183



 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 56/122 (45%), Gaps = 2/122 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    V        +V     +  A  +++ +   C+A V  G K+ G +TE +I R+F 
Sbjct: 1   MFKHRVGELAKRPHIVAAEASITQAADLMAREGISCLAAV-SGAKVVGFLTENNIVRHFD 59

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D++   S+ + + K    + +D  ++ A++LL +     L VVD     +G+V   +L+
Sbjct: 60  VDMDLDASIREFLTKPEGAVAKDLPVSEAVKLLLERAARHLPVVDFSGSLLGLVTEKELV 119

Query: 337 RF 338
             
Sbjct: 120 DA 121



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFH-KDLNTL 283
                  +     + +A+T++ EK   CV  VD   K  GI++E D + R     +    
Sbjct: 137 MHHDPVTLPADRTVREALTLMREKNADCVMAVDA-GKPAGILSERDVLSRVLGYPERLAA 195

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V   M      +    ++   +  +RQ  +  + V+ +  +  G++   DLLR+
Sbjct: 196 PVTRYMTTPVISVPTTAVIYKVILFMRQKGVRRVAVIHEDGRLAGLLSQRDLLRY 250


>gi|238751599|ref|ZP_04613089.1| Hex regulon repressor [Yersinia rohdei ATCC 43380]
 gi|238710161|gb|EEQ02389.1| Hex regulon repressor [Yersinia rohdei ATCC 43380]
          Length = 289

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/166 (21%), Positives = 65/166 (39%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ +         + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 109 MASLDMAKNNLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFD 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T  D+++++S +G +  L  + + AR     +IAITS   + +A  A 
Sbjct: 168 DIVMQRMSCMNSTEGDVVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLANEAT 226

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 227 LPLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 270


>gi|167590112|ref|ZP_02382500.1| CBS domain containing membrane protein [Burkholderia ubonensis Bu]
          Length = 192

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           KR G    VD    L+ ++ E ++ + + +    L+  D+M K+   I   T +T A+ L
Sbjct: 15  KRRGEWLDVDPND-LEALLRETEL-QAYARTFGQLTCADLMTKDAISIAPSTSVTAALTL 72

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L +H +  L VVD  ++ +GIV   DL R+
Sbjct: 73  LDRHRVKALPVVDADRRLVGIVTRADLTRY 102



 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 49/120 (40%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           +     +  A+T+L   R   + VVD  ++L GI+T  D+ R   +              
Sbjct: 60  IAPSTSVTAALTLLDRHRVKALPVVDADRRLVGIVTRADLTRYLRRPTALWQRLSARLPE 119

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV+ VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 120 SFGGQPASVDTVMSRDVASVPQSLPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 179



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 29/146 (19%), Positives = 46/146 (31%), Gaps = 19/146 (13%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGD-----ALAIALLESR---NFSENDFYVL--HP 209
           LT           +AP+TS    L + D     AL +   + R     +  D       P
Sbjct: 47  LTCADLMTKDAISIAPSTSVTAALTLLDRHRVKALPVVDADRRLVGIVTRADLTRYLRRP 106

Query: 210 GGKLGTLFVC---------ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                 L            AS        +  V    PL   + + +      + VVD  
Sbjct: 107 TALWQRLSARLPESFGGQPASVDTVMSRDVASVPQSLPLTALVPLFTHSGHHHIPVVDAS 166

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVE 286
           ++L GIIT+ D+    ++    L   
Sbjct: 167 RRLVGIITQTDLVTGLYRQTQMLEAA 192


>gi|167032044|ref|YP_001667275.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas putida GB-1]
 gi|166858532|gb|ABY96939.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas putida GB-1]
          Length = 489

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 60/171 (35%), Gaps = 11/171 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+ +         +  +    G++  +    + V+      
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIHKNMTIEQQAGEVRKVKKFEAGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    + D   +        V V+     L GI+T  D+   F   L    V DVM 
Sbjct: 98  ITIEADATVRDLFDLTRLNNISGVPVL-ANGDLVGIVTSRDVR--FETRL-DAKVRDVMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
                  + E        +LL +H +  +++VDD     G++   D+ +  
Sbjct: 154 PKERLVTVREGADKNEVRELLHKHRLEKVLIVDDKFNLKGMMTVKDIEKAK 204


>gi|86150123|ref|ZP_01068351.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|218562939|ref|YP_002344718.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|85839569|gb|EAQ56830.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           jejuni CF93-6]
 gi|112360645|emb|CAL35442.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni NCTC 11168]
 gi|315927990|gb|EFV07311.1| CBS domain pair family protein [Campylobacter jejuni subsp. jejuni
           DFVF1099]
 gi|315929316|gb|EFV08525.1| CBS domain pair family protein [Campylobacter jejuni subsp. jejuni
           305]
          Length = 341

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     +++  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKISAKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|314934367|ref|ZP_07841726.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus caprae C87]
 gi|313652297|gb|EFS16060.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Staphylococcus caprae C87]
          Length = 293

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/196 (19%), Positives = 71/196 (36%), Gaps = 4/196 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K  +     L+ N       +      R   +L ++ +           + +      + 
Sbjct: 80  KEASVYNVELVDNENTDSLKK--KMHSRAKGALNNANEKIDDKTIDRICD-LFKCAETIF 136

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G S  + + L   L+  G     V         L      D ++ ++ +G   E++
Sbjct: 137 IYGYGASFVVATDLYQKLSRIGLNIQLVQETHIFTTMLATHNAKDCVVFITNNGMQSEMR 196

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
           +I      + IP++ ITS N + VA  +DIVL+   + +     +  TTS   Q+   D 
Sbjct: 197 SIAKVVSDYHIPVVTITSTNDNPVANRSDIVLSYG-QTDENEMRMGATTSLFAQMFTIDV 255

Query: 189 LAIALLESRNFSENDF 204
           L    +     S  DF
Sbjct: 256 LYYRYIALNYQSSLDF 271


>gi|256854577|ref|ZP_05559941.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|256710137|gb|EEU25181.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
          Length = 272

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/140 (25%), Positives = 54/140 (38%), Gaps = 4/140 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A++ I      + I G+G SG+    L S     G  +  V           ++T
Sbjct: 109 EKLIKAIQLINQASS-LYIFGVGSSGNTSLDLESMFLRVGIQAKAVLDPHYQAQVASLLT 167

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             DL+I+ S SG + +    L  A+     ++AIT+   S +   AD+VL    E     
Sbjct: 168 DRDLVIIFSLSGKTKDTYDSLKIAKNNGAKILAITNYIHSPIGKSADLVLQTAIEEF--- 224

Query: 171 HGLAPTTSAIMQLAIGDALA 190
                    I QL I D L 
Sbjct: 225 LNGGSLAGKISQLYICDLLV 244


>gi|229013517|ref|ZP_04170651.1| transcriptional regulator [Bacillus mycoides DSM 2048]
 gi|229061990|ref|ZP_04199316.1| transcriptional regulator [Bacillus cereus AH603]
 gi|229135122|ref|ZP_04263924.1| transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|229169045|ref|ZP_04296761.1| transcriptional regulator [Bacillus cereus AH621]
 gi|228614454|gb|EEK71563.1| transcriptional regulator [Bacillus cereus AH621]
 gi|228648351|gb|EEL04384.1| transcriptional regulator [Bacillus cereus BDRD-ST196]
 gi|228717299|gb|EEL68972.1| transcriptional regulator [Bacillus cereus AH603]
 gi|228747754|gb|EEL97623.1| transcriptional regulator [Bacillus mycoides DSM 2048]
          Length = 210

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQATLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|210631795|ref|ZP_03297037.1| hypothetical protein COLSTE_00924 [Collinsella stercoris DSM 13279]
 gi|210159915|gb|EEA90886.1| hypothetical protein COLSTE_00924 [Collinsella stercoris DSM 13279]
          Length = 281

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/209 (18%), Positives = 72/209 (34%), Gaps = 12/209 (5%)

Query: 2   HFYFSHFKSVTRKGHSLMKN-STVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEK 59
           H        +     S +++ +    + ++I    +  + SL    +      +   V+ 
Sbjct: 69  HLLIYDLALLRESSSSKIEDLAPTDTSRQTIEKVTRDNIDSLRLVEKLNDPETYEACVDL 128

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   +  + + G+G S      +   L   G     +               +DL I +S
Sbjct: 129 MSDART-INLFGMGASLLSARDMHYKLLRIGVSCNLIDDWHGQLLCASNSGPEDLSIAIS 187

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSEN-KSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           +SG ++E+   +  AR     +IAIT     S +A  AD VL             A   S
Sbjct: 188 YSGLTEEVNVCVGRARERGGKVIAITGSAFDSKLARQADEVLL--VGSTEPLMRSAAMAS 245

Query: 179 AIMQLAIGDALAIALLESRNFSENDFYVL 207
            I QL + D L       ++F   ++   
Sbjct: 246 RIGQLGVIDILF------KSFVNRNYARF 268


>gi|57641493|ref|YP_183971.1| hypothetical protein TK1558 [Thermococcus kodakarensis KOD1]
 gi|57159817|dbj|BAD85747.1| hypothetical protein, conserved, containing CBS domains
           [Thermococcus kodakarensis KOD1]
          Length = 185

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/140 (22%), Positives = 49/140 (35%), Gaps = 17/140 (12%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    +        +     L   +  L         V+D   KL G +T  D+  
Sbjct: 41  RYISKVPVSLVMDTEFLTLHPSDSLSKLVQEL-RGEESSAVVIDGEGKLLGFVTMKDLLN 99

Query: 275 NFHK-------DLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            F          L+ L          VED+M+K P  I  D  L  A+Q++ +     L 
Sbjct: 100 FFAPPKRYSIVGLDLLKRYSINRASRVEDIMVKKPITIHVDENLGRAIQIMLETGKHHLP 159

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVDD  +  G++   D++R 
Sbjct: 160 VVDDENRVHGVLEVKDIIRL 179


>gi|325279371|ref|YP_004251913.1| IMP dehydrogenase [Odoribacter splanchnicus DSM 20712]
 gi|324311180|gb|ADY31733.1| IMP dehydrogenase [Odoribacter splanchnicus DSM 20712]
          Length = 501

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/181 (23%), Positives = 65/181 (35%), Gaps = 15/181 (8%)

Query: 157 DIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           ++ L  P         S      P  SA+MQ    D LAIAL  +RN   +  +   P  
Sbjct: 30  NVSLKTPVVKFRQGETSKIQLNIPFVSAVMQAVSDDGLAIAL--ARNGGLSFIFGSQPIE 87

Query: 212 KLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGII 267
               +                 ++  C L D + +  +     VA+ D+     KL G+I
Sbjct: 88  SQAEMVRRVKKFKAGFVVSDSNLRPDCTLQDVVRLKEQTGHASVAITDDGTPNGKLLGMI 147

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T  D       D     V D M    N  V      L+ A  ++  H ++ L ++DD Q+
Sbjct: 148 TSRDYR--LKTDPLDKPVVDFMTPFENLIVGKLGLTLSEANTIIWDHKLNCLPIIDDNQR 205

Query: 326 A 326
            
Sbjct: 206 L 206


>gi|315226962|ref|ZP_07868750.1| EmrB/QacA family drug resistance transporter [Parascardovia
           denticolens DSM 10105]
 gi|315121094|gb|EFT84226.1| EmrB/QacA family drug resistance transporter [Parascardovia
           denticolens DSM 10105]
          Length = 413

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 23/144 (15%), Positives = 59/144 (40%), Gaps = 26/144 (18%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--- 278
             +     +  +      +DA+ + +EK+     VV+E  +L G +++GD+     +   
Sbjct: 268 RQLMMKAEVYTLPATATALDAMRLFTEKKISGAPVVNEQGELVGFVSDGDVLSTLAEQHP 327

Query: 279 ----------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                 +L +L V+ +  K+      +  +    Q++ Q ++  
Sbjct: 328 QFTSFYAAVIESNGESFDKKLDELLSLPVDRISTKHVITADANDSMPHICQVMVQRHLKK 387

Query: 317 LMVVDDCQKAIGIVHFLDLLRFGI 340
           + V+D   + +GI++  ++LR+ +
Sbjct: 388 VPVMD-QGRMVGILNRSNILRYAV 410


>gi|309776050|ref|ZP_07671041.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium 3_1_53]
 gi|308916001|gb|EFP61750.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium 3_1_53]
          Length = 186

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/183 (20%), Positives = 65/183 (35%), Gaps = 16/183 (8%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
             L+   +S+    + +F   VE I   +  V   G G+SG      A  L   G  S+ 
Sbjct: 12  DELTHTLTSIDETKAEKF---VELIDEAE-EVFCAGAGRSGFQVKGFAMRLMHMGVASYV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V      +     I +  +++V S SG +  L      A+     +  IT   +S +A  
Sbjct: 68  VGETCTPN-----IKKGGVLVVCSGSGETKSLVNHAAKAKEVGARVALITINPQSTIAGM 122

Query: 156 ADIVLTLPKE-----PESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           AD+V+ +         +     + P  S   Q      D   + L+E R    +  +  H
Sbjct: 123 ADVVIEISAPSPKSAKQGDIKSIQPMGSLFEQSEGIFMDIAVMMLMERRGKDSDTMFGRH 182

Query: 209 PGG 211
              
Sbjct: 183 ANM 185


>gi|293606794|ref|ZP_06689145.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
 gi|292814798|gb|EFF73928.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
          Length = 151

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 47/133 (35%), Gaps = 28/133 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V    P+   +  + ++    V V  +   L G++TEGD+ R                  
Sbjct: 14  VTARTPVSQIMHDMLDRDISAVMVTGDDGSLIGVVTEGDLIRRQDSAHQKKLDHWLTLLA 73

Query: 279 -------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                         L+  +   VM   P  + E T L     +L +  I  + V+ D  K
Sbjct: 74  EGEPLNLEFLHSLQLSEQTASAVMSSPPITVDETTELATIADVLLKRGIKRVPVIRDE-K 132

Query: 326 AIGIVHFLDLLRF 338
            +G+V   D+LR 
Sbjct: 133 LVGVVSRRDILRA 145



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 25/53 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++M   P  +   T ++  M  +   +IS +MV  D    IG+V   DL+R
Sbjct: 3   ARELMTAEPFCVTARTPVSQIMHDMLDRDISAVMVTGDDGSLIGVVTEGDLIR 55


>gi|254428410|ref|ZP_05042117.1| hypothetical protein ADG881_1640 [Alcanivorax sp. DG881]
 gi|196194579|gb|EDX89538.1| hypothetical protein ADG881_1640 [Alcanivorax sp. DG881]
          Length = 135

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 48/127 (37%), Gaps = 6/127 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +    +M        +K G  L + +  L + +F  + VVD   K+ G ++E D  R 
Sbjct: 2   QEMTVRALMAKHPMA--IKTGTELTEVVDALLQHKFTGLPVVDSQNKVVGFVSEQDCLRK 59

Query: 276 F----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +     L VED M   P  + ED       +L+      +  VVD      G++ 
Sbjct: 60  LLISSYHCEGALVVEDFMHDQPLTVKEDDSAVNVAELMVTEKPKIYPVVDAQGILTGLLT 119

Query: 332 FLDLLRF 338
              +LR 
Sbjct: 120 REQVLRA 126



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/59 (35%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  ++V  +M K+P  I   T LT  +  L QH  + L VVD   K +G V   D LR 
Sbjct: 1   MQEMTVRALMAKHPMAIKTGTELTEVVDALLQHKFTGLPVVDSQNKVVGFVSEQDCLRK 59


>gi|153005828|ref|YP_001380153.1| signal-transduction protein [Anaeromyxobacter sp. Fw109-5]
 gi|152029401|gb|ABS27169.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. Fw109-5]
          Length = 187

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 49/127 (38%), Gaps = 6/127 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                   +    +  +V +    PL  A  +++E+R G VAV      L G++TE D+ 
Sbjct: 43  QQERRMASIRKHVTRDIVALDAGVPLRQAAQLMAERRIGSVAVKGPEGIL-GLVTERDLV 101

Query: 274 RNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                     +L + + M      +           L+R H    L+V ++  +  G+V 
Sbjct: 102 TTVLARGGDGSLPIREAMRTGVPRVQASASEADCATLMRDHYTRHLLV-EEDGRVTGVVS 160

Query: 332 FLDLLRF 338
             D+++ 
Sbjct: 161 MRDIIQL 167


>gi|152986576|ref|YP_001348467.1| hypothetical protein PSPA7_3107 [Pseudomonas aeruginosa PA7]
 gi|150961734|gb|ABR83759.1| conserved hypothetical protein [Pseudomonas aeruginosa PA7]
          Length = 137

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 7   MSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLVVRGLADGLAADR 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 66  PVREVMSAELRYCFEDEEVDHVAKNMAQLEKRRLPVMDRNKRLVGIVSLANI 117



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V ++M +  + +   T L  A  L+RQ +I  L+V ++ ++  G+V   DL+  G+
Sbjct: 1   MKVREIMSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLVVRGL 57


>gi|116630159|ref|YP_815331.1| transcriptional regulator [Lactobacillus gasseri ATCC 33323]
 gi|238854197|ref|ZP_04644544.1| transcriptional regulator [Lactobacillus gasseri 202-4]
 gi|282851189|ref|ZP_06260554.1| SIS domain protein [Lactobacillus gasseri 224-1]
 gi|311110249|ref|ZP_07711646.1| transcriptional regulator [Lactobacillus gasseri MV-22]
 gi|116095741|gb|ABJ60893.1| Transcriptional regulator [Lactobacillus gasseri ATCC 33323]
 gi|238833273|gb|EEQ25563.1| transcriptional regulator [Lactobacillus gasseri 202-4]
 gi|282557157|gb|EFB62754.1| SIS domain protein [Lactobacillus gasseri 224-1]
 gi|311065403|gb|EFQ45743.1| transcriptional regulator [Lactobacillus gasseri MV-22]
          Length = 279

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 70/182 (38%), Gaps = 10/182 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             EK  +  + ++L    + +    +  I+A +  + I+  G +  + +         G 
Sbjct: 97  EIEKNKVGEIHATLSQIPTEKLEKILSIIEASR-VIQISAEGDTYPVAADAVYKFNQIGL 155

Query: 92  PSF----FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
            SF     V  A+A   +LG   R D +IV+S SG S  L   +  A +  + +I+IT+ 
Sbjct: 156 LSFASGGNVETADAQTMNLG---RKDCLIVISNSGESAALLKEIKLAHKNKLKVISITNN 212

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
             S +A  +D  L          +      S +    I +AL + L++       +    
Sbjct: 213 PASPIALASDYHLKTGVRQTILQNQYYF--SRVAAFTIIEALFLLLIKRNEKRIENIKQH 270

Query: 208 HP 209
             
Sbjct: 271 EK 272


>gi|257869236|ref|ZP_05648889.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           gallinarum EG2]
 gi|257803400|gb|EEV32222.1| glucosamine-fructose-6-phosphate aminotransferase [Enterococcus
           gallinarum EG2]
          Length = 600

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 58/270 (21%), Positives = 103/270 (38%), Gaps = 31/270 (11%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L+ I  +   +  L    QG        A++       R+ I   G S H G    + L 
Sbjct: 252 LKEIDEQPAVMRRLIQEYQGTGEVTIDDALKDQMIASDRIYIVACGTSNHAGWAAKAILE 311

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           S       VH +     ++ +++     I LS SG + + + +L    + ++P + IT+ 
Sbjct: 312 SLTQIPVEVHLSSEFGYNMPLLSAKPFFIFLSQSGETADSRQVLVKINQMNLPSLTITNV 371

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS-ENDFYV 206
             S ++  AD  L L   PE     +A T +   Q+A+   LA A+ +++      DF V
Sbjct: 372 AGSTLSREADHTLLLHAGPEIA---VASTKAYTAQIAVLTLLAKAIGDAKGIGAAQDFDV 428

Query: 207 LHP----GGKLGTLFVCASDVMHSGDSIPLVKIGC-----------PLIDA--ITILS-- 247
            H        + TL    + +    +    V                +  A  +  +S  
Sbjct: 429 FHELSIVASAMETLVDEKAVISQLAEDYLSVSRNAFYIGRSNDYYVSMEAALKLKEISYI 488

Query: 248 --------EKRFGCVAVVDEGQKLKGIITE 269
                   E + G +A+++EG  + GIITE
Sbjct: 489 QAEGFAAGELKHGTIALIEEGTPVIGIITE 518


>gi|168242809|ref|ZP_02667741.1| 3-hexulose-6-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|194449019|ref|YP_002047007.1| 3-hexulose-6-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|194407323|gb|ACF67542.1| 3-hexulose-6-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|205338137|gb|EDZ24901.1| 3-hexulose-6-phosphate isomerase [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
          Length = 186

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 67/178 (37%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LS L+ +       Q    V +IK  K  + + G G+SG      A+ L   G     V 
Sbjct: 11  LSELQQNAMKIDDAQAAQFVAQIKNAK-HIFLQGAGRSGIAIRGFANRLLHLGFSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  L ++   A    + +  +T + +S +   A 
Sbjct: 70  EISSPHT-----KPGDLVIIGSGSGETGSLVSLAQKAVACGVDVALVTMKAESTIGKLAK 124

Query: 158 IVLTLP---KEPESCPHG--LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
             L LP   KE      G    P  SA  Q      DA+ + L+     + +  +  H
Sbjct: 125 STLVLPGTVKEDNDREEGAFSQPMGSAFEQLCFITYDAIVLELMAQLGETSDTMFKRH 182


>gi|254255397|ref|ZP_04948713.1| hypothetical protein BDAG_04736 [Burkholderia dolosa AUO158]
 gi|124901134|gb|EAY71884.1| hypothetical protein BDAG_04736 [Burkholderia dolosa AUO158]
          Length = 141

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  V     L +A  ++S+   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAVTVAPTQSLREAARLMSDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E V+        ED  ++   + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  RIEGVVSGPANWCYEDDDISAVQKKMEDAQIRRVPVVDRDKRLVGIVALGDL 118



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V +VM ++   +     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 2   TTVSEVMTRDAVTVAPTQSLREAARLMSDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|153800829|ref|ZP_01955415.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227080425|ref|YP_002808976.1| Putative HTH-type transcriptional regulator yfeT [Vibrio cholerae
           M66-2]
 gi|229512481|ref|ZP_04401953.1| transcriptional regulator RpiR family [Vibrio cholerae TMA 21]
 gi|262190376|ref|ZP_06048637.1| transcriptional regulator RpiR family [Vibrio cholerae CT 5369-93]
 gi|298500846|ref|ZP_07010648.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|124123660|gb|EAY42403.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|227008313|gb|ACP04525.1| Putative HTH-type transcriptional regulator yfeT [Vibrio cholerae
           M66-2]
 gi|229350480|gb|EEO15428.1| transcriptional regulator RpiR family [Vibrio cholerae TMA 21]
 gi|262033737|gb|EEY52216.1| transcriptional regulator RpiR family [Vibrio cholerae CT 5369-93]
 gi|297540350|gb|EFH76409.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 282

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 38/178 (21%), Positives = 71/178 (39%), Gaps = 6/178 (3%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
            A + +  +   +    ++L+     +F  A+  I+    RV I GIG S  +   LA  
Sbjct: 98  IAQKLVQTKTEAMFHTTNALR---LDEFSEAISWIQQAV-RVQIIGIGGSALVAKDLAFK 153

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  +     +         +   D++I +S+SG   E+      A++    +IA+T
Sbjct: 154 LLKLGITALTEQDSHVQIATARTLHSQDVLIAISFSGEKREILIAAQAAKQQGAKVIALT 213

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + NK+ +   AD+ L      +   H  +   S   Q  + D + + L + R  S   
Sbjct: 214 TPNKNRLRELADLALDT--IADETQHRSSAIASRTAQNVLTDLIFLTLTQQRETSARQ 269


>gi|89092461|ref|ZP_01165415.1| sensory box/GGDEF/EAL/CBS domain protein [Oceanospirillum sp.
           MED92]
 gi|89083549|gb|EAR62767.1| sensory box/GGDEF/EAL/CBS domain protein [Oceanospirillum sp.
           MED92]
          Length = 837

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +   +   +    +  A+ +++  + GCV +  E  +  GI+T  D+ R   +  +   V
Sbjct: 17  AHQDLVTCRPDESMEQAVRLMATYKIGCVVIC-ESDRPLGIVTRRDVMRLTVEGASFAEV 75

Query: 286 E--DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +VM +  K +     +  A        +  L+VVD+     GI+   D++
Sbjct: 76  QLNEVMTQPVKTVSITETIDDAGLRFIAEGVRHLVVVDENGALFGILSETDVV 128



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           ++     +  A   L         + D G+++KGI+TE D+      +     + +    
Sbjct: 152 ILPETETVRVAAERLKTTGQTAALISD-GEQIKGILTENDLMVCLASNDLDKPIAEFSAG 210

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +     L  A +  RQH    L V +  ++ IG+V + D+LR
Sbjct: 211 ELITVESSISLYNARRTFRQHGFHHLGVKNHDEQVIGLVSYGDILR 256



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 3/125 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G  F            +  V I   + DA      +    + VVDE   L GI++E D+ 
Sbjct: 69  GASFAEVQLNEVMTQPVKTVSITETIDDAGLRFIAEGVRHLVVVDENGALFGILSETDVV 128

Query: 274 RN--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +     DL   SV +V+ K+  ++ E   + VA + L+    +  ++ D  Q   GI+ 
Sbjct: 129 NSQGVEHDLFLRSVSEVINKDTLILPETETVRVAAERLKTTGQTAALISDGEQ-IKGILT 187

Query: 332 FLDLL 336
             DL+
Sbjct: 188 ENDLM 192



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V     ++      D  +  A++L+  + I  +++  +  + +GIV   D++R 
Sbjct: 13  VRQAAHQDLVTCRPDESMEQAVRLMATYKIGCVVIC-ESDRPLGIVTRRDVMRL 65


>gi|240279496|gb|EER43001.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces capsulatus
           H143]
 gi|325092625|gb|EGC45935.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces capsulatus H88]
          Length = 549

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D+ L  P          AP  S+ M      ++AI +       +   N S  D     
Sbjct: 72  SDVSLETPVTRRITL--KAPLLSSPMDTVTEHSMAIHMALLGGLGVIHHNCSAEDQA--- 126

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                  +        +     P+V      + +A  +  +  FG   V + G    KL 
Sbjct: 127 ------NMVRKVKRYENGFILEPVVLSPTTTVAEAKALKEKWGFGGFPVTENGTLPSKLI 180

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT  DI  +         V  VM  +       T L  A ++LR      L +VD   
Sbjct: 181 GMITSRDIQFH---PTGEDPVTAVMTTDLVTAPSGTTLAEANEVLRSSKKGKLPIVDSEG 237

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 238 NLVSLLSRSDLMK 250


>gi|261346285|ref|ZP_05973929.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
 gi|282565596|gb|EFB71131.1| transcriptional regulator, RpiR family [Providencia rustigianii DSM
           4541]
          Length = 280

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 64/152 (42%), Gaps = 3/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S++E SL+           +K+   K R+V+ GIG S  + + +   L     P  F  
Sbjct: 105 ISAIEKSLELLEPVAVDTIAQKLVEAK-RIVVFGIGSSAIVANDIFHKLIRVNKPVLFST 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DL I ++  G++ E+  +L  A+      +A+T   +   A  AD
Sbjct: 164 DLHVQLSYSANLNDGDLAIAVTARGNTPEINRMLKSAQESGCTTVALTRFGQDESARIAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++L    + +    G+   T  ++Q+ I D L
Sbjct: 224 LILPYYYDEQHTQLGVI--TPQVLQMVIFDTL 253


>gi|212224870|ref|YP_002308106.1| hypothetical protein TON_1719 [Thermococcus onnurineus NA1]
 gi|212009827|gb|ACJ17209.1| conserved hypothetical protein [Thermococcus onnurineus NA1]
          Length = 181

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 16/101 (15%)

Query: 254 VAVVDEGQKLKGIITEGDI-------FRNFHKDL---------NTLSVEDVMIKNPKVIL 297
             VVD+  +L G +T  DI        R+                  VED+M+  P  I 
Sbjct: 75  AVVVDDEGRLIGFVTMKDILHFFDPPRRHSIVGFGLLKRYSMTRATKVEDIMVTKPITIN 134

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  L  A++L+ +     L VVD+  K  GI+   D++R 
Sbjct: 135 VNDDLGHAIRLMIETGKHHLPVVDEEGKVHGILEVKDIIRL 175



 Score = 36.0 bits (82), Expect = 8.7,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 2/63 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T      D+M +      V     L  AI ++ E     + VVDE  K+ GI+   DI 
Sbjct: 116 MTRATKVEDIMVTKPITINVNDD--LGHAIRLMIETGKHHLPVVDEEGKVHGILEVKDII 173

Query: 274 RNF 276
           R  
Sbjct: 174 RLI 176


>gi|154253102|ref|YP_001413926.1| signal-transduction protein [Parvibaculum lavamentivorans DS-1]
 gi|154157052|gb|ABS64269.1| putative signal-transduction protein with CBS domains [Parvibaculum
           lavamentivorans DS-1]
          Length = 177

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 54/130 (41%), Gaps = 6/130 (4%)

Query: 212 KLGTLFVCASDVMHSG-DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
               + +  + ++ +    +  V     L +  T L+E+R G V VV + +K+ GI++E 
Sbjct: 30  NWEEMPMNVAAILKAKGSDVATVSPQTTLSEVATFLTERRIGAV-VVMQDRKVLGIVSER 88

Query: 271 DIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           DI +   +         V DVM         +  +   M  +       L V+ +  + +
Sbjct: 89  DIVKAVARTGAQALGAPVRDVMTSRVVTCGLNDSVDELMDSMTMGRFRHLPVI-EDGELV 147

Query: 328 GIVHFLDLLR 337
           GIV   D+++
Sbjct: 148 GIVSIGDVVK 157



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   T L+     L +  I  ++V+   +K +GIV   D+++ 
Sbjct: 51  TVSPQTTLSEVATFLTERRIGAVVVM-QDRKVLGIVSERDIVKA 93


>gi|319775985|ref|YP_004138473.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           F3047]
 gi|329123850|ref|ZP_08252408.1| RpiR family transcriptional regulator [Haemophilus aegyptius ATCC
           11116]
 gi|317450576|emb|CBY86793.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           F3047]
 gi|327469337|gb|EGF14808.1| RpiR family transcriptional regulator [Haemophilus aegyptius ATCC
           11116]
          Length = 288

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|313117289|ref|YP_004044272.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
 gi|312294180|gb|ADQ68611.1| predicted transcriptional regulator, contains C-terminal CBS
           domains [Halogeometricum borinquense DSM 11551]
          Length = 405

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/128 (21%), Positives = 52/128 (40%), Gaps = 12/128 (9%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  K+G+L      +               +     ++ +     + V  EG  + G+++
Sbjct: 58  PDQKVGSLVWHVPRLA----------PDEDVRKVARLMIDSDSQLLPVF-EGDDVVGVVS 106

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI       L+  +V DV       +  +T    A+   R+H+I+ L VV+D   A+G
Sbjct: 107 ADDILEAVQPFLDVATVGDVYTDELVSVESETTAGEAVTRFREHHITHLPVVEDD-AAVG 165

Query: 329 IVHFLDLL 336
           I+   D++
Sbjct: 166 ILSLYDMV 173



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 49/142 (34%), Gaps = 40/142 (28%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           V+      +A+T   E     + VV++     GI++  D+                    
Sbjct: 134 VESETTAGEAVTRFREHHITHLPVVEDDAA-VGILSLYDMVDLTVHSGTQSQGGDATGAD 192

Query: 273 ------------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                                    L  L V DVM+   + I  D  L  A++ + + + 
Sbjct: 193 AFGGGGTAGRTHRGGYGAREGELARLFDLPVRDVMVSPVRTIRPDETLETAVEAMFETDG 252

Query: 315 SVLMVVDDCQKAIGIVHFLDLL 336
           S L+VV+D    +GIV   D+L
Sbjct: 253 SSLVVVEDDC-PVGIVTKTDIL 273


>gi|52549112|gb|AAU82961.1| conserved hypothetical protein [uncultured archaeon GZfos24D9]
          Length = 271

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +      + E   G V +   G K  G++T+ DI        K  + +  + +M
Sbjct: 153 VDEDTVVSKISKDMEESEIGGVVIT-RGGKPIGMVTDRDIASKVIMEDKKASEIKAKAIM 211

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 I  D  +  A  ++   +I  + V+D+  K +GI+   ++L
Sbjct: 212 SSPLITIGPDASVEKACGIMAAKDIRRMPVMDED-KLVGIISVRNIL 257



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIK 291
               +      +     G V +  E  K  GI+T+ DI      ++ T   ++ + +M  
Sbjct: 16  EDTSITIIARDMELSEIGSVVITRED-KAVGIVTDRDISIKICANMGTPGEVTAKGIMSS 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +  A  LL + +I  L V+++  K +GI+   ++L
Sbjct: 75  PLITIGPEAPVETACGLLAETDIRRLPVMEND-KLVGIISVRNIL 118


>gi|330507442|ref|YP_004383870.1| peptidase M50 [Methanosaeta concilii GP-6]
 gi|328928250|gb|AEB68052.1| peptidase M50, putative [Methanosaeta concilii GP-6]
          Length = 366

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 58/150 (38%), Gaps = 7/150 (4%)

Query: 189 LAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
           L +A       SE          ++         +    D +  V     L D    + E
Sbjct: 216 LFVAFFVYVGASEE-----EKATQISVSLEGTRVMDIMSDDVHTVDPDMTLQDLKEHMFE 270

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
           ++     V+  G ++ G++T  D+ R    D     V +VM +   VI      + AM +
Sbjct: 271 EKHRGYPVM-SGDEVIGVVTLSDLQRVPQVDHADTRVAEVMTRKLYVIGPSEEASAAMMM 329

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + NI  L V+ D  + +GIV   DL+R 
Sbjct: 330 MNKMNIRRLPVMSD-GRLVGIVSREDLVRA 358


>gi|302335820|ref|YP_003801027.1| IMP dehydrogenase [Olsenella uli DSM 7084]
 gi|301319660|gb|ADK68147.1| IMP dehydrogenase [Olsenella uli DSM 7084]
          Length = 505

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/167 (21%), Positives = 57/167 (34%), Gaps = 8/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  LAIAL +    S   +    P  +   +    +       S   
Sbjct: 51  NVPMVSAIMQAVSGPRLAIALAQQGGISF-IYGSQTPESEAAMVREVKTYKAGFVVSDST 109

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +     L D + +        + V  +G      +GI+T  D      +D     V + M
Sbjct: 110 LTPDMTLADVLEMRDRTGHTTMPVTADGSPTGPFRGIVTSRDYR--VSRDDRGKRVFEFM 167

Query: 290 I--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              K+       T L     ++  H I+ L +VD     + +V   D
Sbjct: 168 TGAKDCVTADPSTSLKACNDIIWDHKINTLPIVDAQGNLVSLVFRKD 214


>gi|227512673|ref|ZP_03942722.1| transcriptional regulator [Lactobacillus buchneri ATCC 11577]
 gi|227084138|gb|EEI19450.1| transcriptional regulator [Lactobacillus buchneri ATCC 11577]
          Length = 228

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 6/129 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   L    +  + +         +     L +A+  L  +  G + VVDE   L G+I+
Sbjct: 84  PDKVLNYQQLFETSISEILQKPTKIMEAATLTEAVNTLFIEDVGSLYVVDEHLHLVGLIS 143

Query: 269 EGDIFRNFHKDLNT--LSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVD--D 322
             D+ R    + N        VM + P    +  D  +  A QLL    +  L VVD  D
Sbjct: 144 RKDLLRATLNNTNASLTLASTVMTRMPNIFTVTPDIPIIKAGQLLLDRKVDSLPVVDQND 203

Query: 323 CQKAIGIVH 331
            QK IG + 
Sbjct: 204 HQKVIGKIT 212



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 1/61 (1%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + L   S+ +++ K P  I+E   LT A+  L   ++  L VVD+    +G++   DLLR
Sbjct: 91  QQLFETSISEILQK-PTKIMEAATLTEAVNTLFIEDVGSLYVVDEHLHLVGLISRKDLLR 149

Query: 338 F 338
            
Sbjct: 150 A 150


>gi|148269730|ref|YP_001244190.1| RpiR family transcriptional regulator [Thermotoga petrophila RKU-1]
 gi|170288405|ref|YP_001738643.1| RpiR family transcriptional regulator [Thermotoga sp. RQ2]
 gi|147735274|gb|ABQ46614.1| transcriptional regulator, RpiR family [Thermotoga petrophila
           RKU-1]
 gi|170175908|gb|ACB08960.1| transcriptional regulator, RpiR family [Thermotoga sp. RQ2]
          Length = 280

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + ++  +L          AV+  K  + R++  G   S  +           G    
Sbjct: 102 KATVRAILDTLNWMDVDSIEKAVDLFKNAQ-RIIFIGFAASAAVAFDAFHKFTRIGKNCL 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F +        L   + +DL++ +S +G +  +      A+   +P++AIT   KS +A 
Sbjct: 161 FSNDEHIIATILATASPNDLLVAISHTGETISVVNFAKKAKEMKMPVVAITGNRKSTLAK 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++++VL      +         TS I+QL I D +   L   
Sbjct: 221 YSNVVLAT--NTKETKIRTDAMTSRIVQLVILDTIYTLLAAR 260


>gi|227874335|ref|ZP_03992520.1| RpiR family transcriptional regulator [Oribacterium sinus F0268]
 gi|227839823|gb|EEJ50268.1| RpiR family transcriptional regulator [Oribacterium sinus F0268]
          Length = 285

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 34/175 (19%), Positives = 67/175 (38%), Gaps = 10/175 (5%)

Query: 17  SLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI--KAIKGRVVITGIGK 74
           SL  N+  + A + +      +    S L       F+   E +   +   R++  G+G 
Sbjct: 92  SLQDNNIAELAGKVLEETIDSIKETHSLLD------FNKVTEAMNALSKAKRILFFGVGA 145

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S     K  +         +              + R D+ ++ S+SG++ ++  I   A
Sbjct: 146 SMLTAMKAMNKFHRIEPKVYCSEMVSQQLMSAATMERGDVAVIFSYSGATRDIVEIAKLA 205

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           +     +++IT   KS +  + DI+L       S   G   T++ I QL + D +
Sbjct: 206 KESGATVVSITRFQKSELTDYTDILLLCGANVGSLQKG--STSAEISQLFLVDIM 258


>gi|170741730|ref|YP_001770385.1| CBS domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196004|gb|ACA17951.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
          Length = 246

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 49/129 (37%), Gaps = 25/129 (19%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLS------- 284
           +    L  A  ++ EKR   + ++D   +L GI+TEGD+   R         +       
Sbjct: 15  RADLSLELAAALMLEKRISGLPILDAAGRLVGIVTEGDLVARREIGTARPHPAWIRYLLS 74

Query: 285 ---------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                          V D M +       +T L   + L+ +  I  + +V +  + +GI
Sbjct: 75  PGRLAAAYARECGHRVGDAMTREVVTASPETPLDDIVGLMARRRIRRVPIV-EDGRLVGI 133

Query: 330 VHFLDLLRF 338
           V   DLLR 
Sbjct: 134 VTRADLLRA 142



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   ++M         D  L +A  L+ +  IS L ++D   + +GIV   DL+
Sbjct: 1   MRAREIMTTQVTCGRADLSLELAAALMLEKRISGLPILDAAGRLVGIVTEGDLV 54



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 30/77 (38%), Gaps = 3/77 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
           PG             +    +  +V      PL D + +++ +R   V +V E  +L GI
Sbjct: 75  PGRLAAAYARECGHRVGDAMTREVVTASPETPLDDIVGLMARRRIRRVPIV-EDGRLVGI 133

Query: 267 ITEGDIFRNFHKDLNTL 283
           +T  D+ R  H  L   
Sbjct: 134 VTRADLLRALHDALRAA 150


>gi|86605549|ref|YP_474312.1| chloride channel (ClC) family protein [Synechococcus sp. JA-3-3Ab]
 gi|86554091|gb|ABC99049.1| chloride transporter, chloride channel (ClC) family [Synechococcus
           sp. JA-3-3Ab]
          Length = 614

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 58/129 (44%), Gaps = 8/129 (6%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  +        +          L+    PL +A+  L +++     VVD  ++L+GI+T
Sbjct: 442 PSARRRQEPKGLTVQEVMVPPSLLLPQDTPLREALERLLQQKCHSALVVDRQERLRGILT 501

Query: 269 EGDIFRNFHK----DLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVV--D 321
             D+ R        ++  L+VE V  ++P      D  + VA + L ++++  L VV  +
Sbjct: 502 LEDLERALAHRGAGEVAELTVEQV-SQSPVLTTFPDEAVAVAAEPLYEYDLRQLPVVSRE 560

Query: 322 DCQKAIGIV 330
           D +  +G++
Sbjct: 561 DPEHVVGLL 569



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 31/56 (55%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+V++VM+    ++ +DT L  A++ L Q      +VVD  ++  GI+   DL R 
Sbjct: 453 LTVQEVMVPPSLLLPQDTPLREALERLLQQKCHSALVVDRQERLRGILTLEDLERA 508


>gi|302340076|ref|YP_003805282.1| RpiR family transcriptional regulator [Spirochaeta smaragdinae DSM
           11293]
 gi|301637261|gb|ADK82688.1| transcriptional regulator, RpiR family [Spirochaeta smaragdinae DSM
           11293]
          Length = 280

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/160 (17%), Positives = 57/160 (35%), Gaps = 3/160 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            +S+LE S           A + I + + R+ + G G S  +          TG      
Sbjct: 103 AISTLELSRNTLDRKAMTEAADLITSSE-RLYLFGTGGSNIVARDAFHKFIRTGLDCAMA 161

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                              +++S +G + +  AI+   +      I +TS  +S +A   
Sbjct: 162 EDYHMQLMLASQSCEHCAALIISHTGENMDTLAIVEELKHSGCRTIMLTSNPRSPLARAG 221

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
              ++L  +  S        ++ I  L + DAL + +++ 
Sbjct: 222 Q--ISLSVQIASTSFVSEAFSARIAHLVVIDALYVEIMKR 259


>gi|52081470|ref|YP_080261.1| acetoin dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52786846|ref|YP_092675.1| AcuB [Bacillus licheniformis ATCC 14580]
 gi|319647375|ref|ZP_08001597.1| AcuB protein [Bacillus sp. BT1B_CT2]
 gi|52004681|gb|AAU24623.1| acetoin dehydrogenase [Bacillus licheniformis ATCC 14580]
 gi|52349348|gb|AAU41982.1| AcuB [Bacillus licheniformis ATCC 14580]
 gi|317390722|gb|EFV71527.1| AcuB protein [Bacillus sp. BT1B_CT2]
          Length = 214

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 42/111 (37%), Gaps = 9/111 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNT----LSV 285
                + +AI  +       + V++E   + GI+T+ D+       F ++ +       V
Sbjct: 15  SRTDTIEEAIKRMRTFHIKHLPVINERGTVIGIVTDRDVKTASPSIFAQNRSNEDLKKPV 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           E +M K                +  +H I  L +V    K +GIV   DLL
Sbjct: 75  ELIMSKEVITGHPLDFAEEISAVFFEHEIGCLPIV-KNGKLVGIVTKSDLL 124



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE +M ++   +     +  A++ +R  +I  L V+++    IGIV   D
Sbjct: 3   VEKIMKRDVVTLSRTDTIEEAIKRMRTFHIKHLPVINERGTVIGIVTDRD 52


>gi|320528401|ref|ZP_08029563.1| inosine 5-monophosphate dehydrogenase [Solobacterium moorei F0204]
 gi|320131315|gb|EFW23883.1| inosine 5-monophosphate dehydrogenase [Solobacterium moorei F0204]
          Length = 502

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 60/163 (36%), Gaps = 16/163 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA+MQ   GD L IAL +           +     + +     + V +      +
Sbjct: 51  NIPMISAVMQSVSGDRLGIALAKEGGI-----AFIFGSQPIESQAAMVARVKNHKAGFVV 105

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSV 285
               VK      +   ++ E     +AV ++     KL G++T  D      +      V
Sbjct: 106 SDSNVKPNAKFTEVYALIEETGHSTIAVTEDGTPNGKLMGLLTSRDYR--ISRMTGNELV 163

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +D M    N  V   +T L+ A  L+  + ++ L VVD+    
Sbjct: 164 KDYMTPRENLIVGGPNTTLSSANDLIWDNKLNTLPVVDENDHL 206


>gi|88596513|ref|ZP_01099750.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
 gi|88191354|gb|EAQ95326.1| nucleotidyltransferase family protein [Campylobacter jejuni subsp.
           jejuni 84-25]
          Length = 341

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     ++L  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKLSSKTDIYDFPVLDEKGQILSIKSISSLLKA 114


>gi|116749825|ref|YP_846512.1| CBS domain-containing protein [Syntrophobacter fumaroxidans MPOB]
 gi|116698889|gb|ABK18077.1| CBS domain containing protein [Syntrophobacter fumaroxidans MPOB]
          Length = 425

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 9/107 (8%)

Query: 235 IGCPLIDAITI-----LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
               +  AI       + +     + +V+E   L G++   DI       ++   +ED+M
Sbjct: 316 PTTTVGQAIRQYRHSSMDKDVIMYLYIVNEQNTLLGVM---DIQELLQASMDD-KLEDIM 371

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 +     L  A +L  ++N   L VVD+ ++  G++ + D++
Sbjct: 372 TTEVITLSPGDTLHEAAELFSRYNFRALPVVDENERIQGVIPYRDIM 418



 Score = 42.6 bits (99), Expect = 0.093,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 62/164 (37%), Gaps = 18/164 (10%)

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++ +  S  +DE+  ++   +   I         +S+++ H + +L L     S      
Sbjct: 268 VLAILPSADADEILKLMDTEKAAKI---------ESLLSKHYETILNLA---TSRFLKFL 315

Query: 175 PTTSAIMQ-----LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDS 229
           PTT+          +  D   I  L   N       V+     L        + + + + 
Sbjct: 316 PTTTVGQAIRQYRHSSMDKDVIMYLYIVNEQNTLLGVMDIQELLQASMDDKLEDIMTTEV 375

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           I L   G  L +A  + S   F  + VVDE ++++G+I   DI 
Sbjct: 376 ITL-SPGDTLHEAAELFSRYNFRALPVVDENERIQGVIPYRDIM 418


>gi|253999206|ref|YP_003051269.1| sugar isomerase (SIS) [Methylovorus sp. SIP3-4]
 gi|313201293|ref|YP_004039951.1| sugar isomerase (sis) [Methylovorus sp. MP688]
 gi|253985885|gb|ACT50742.1| sugar isomerase (SIS) [Methylovorus sp. SIP3-4]
 gi|312440609|gb|ADQ84715.1| sugar isomerase (SIS) [Methylovorus sp. MP688]
          Length = 178

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 59/152 (38%), Gaps = 7/152 (4%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           K+    GR  I G G+S  +    A  L   G     V            I   DL+I++
Sbjct: 28  KLVEAAGRTFIGGAGRSLLVSRFFAMRLVHAGYNVSMVGEVVTP-----AIKSGDLLILV 82

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG ++ L   +  A+     L+ I+ +  S +A  AD+V+ + ++         P  S
Sbjct: 83  SGSGGTETLLPFVKKAKSLGAKLVVISMKKTSPMADAADLVIQIGQDDSFPLTKGMPMGS 142

Query: 179 AIM--QLAIGDALAIALLESRNFSENDFYVLH 208
                 L   + +   L+ ++  +E     +H
Sbjct: 143 QFELSTLIFLEGVISELIHAKGLTEEGMRAIH 174


>gi|153956188|ref|YP_001396953.1| hypothetical protein CKL_3591 [Clostridium kluyveri DSM 555]
 gi|219856513|ref|YP_002473635.1| hypothetical protein CKR_3170 [Clostridium kluyveri NBRC 12016]
 gi|146349046|gb|EDK35582.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570237|dbj|BAH08221.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 141

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 36/85 (42%), Gaps = 3/85 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLSVEDVMIK 291
                +  A  ++ E   G + V  +  K+ GI+T+ DI      +K  N+ +V D+M  
Sbjct: 15  NPDDTIDKAAQVMMENNIGSLPVC-QQGKIIGILTDRDISIRAMGNKASNSKTVRDIMSS 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISV 316
           NP     D  +    +++ +  I  
Sbjct: 74  NPVTASPDMDVKDVSRIMSERQIRR 98



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VE+VM K+   +  D  +  A Q++ ++NI  L V     K IGI+   D+
Sbjct: 1   MKVENVMTKSVASLNPDDTIDKAAQVMMENNIGSLPVC-QQGKIIGILTDRDI 52


>gi|163942053|ref|YP_001646937.1| signal-transduction protein [Bacillus weihenstephanensis KBAB4]
 gi|163864250|gb|ABY45309.1| putative signal-transduction protein with CBS domains [Bacillus
           weihenstephanensis KBAB4]
          Length = 211

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQATLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 181 VVKDTKQGLEVIGRITKTNITRA 203


>gi|323357570|ref|YP_004223966.1| transcriptional regulator [Microbacterium testaceum StLB037]
 gi|323273941|dbj|BAJ74086.1| transcriptional regulator [Microbacterium testaceum StLB037]
          Length = 301

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 58/161 (36%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL+ + +         A+E I      ++  G G SG I           G P     
Sbjct: 116 ISSLDRARRTLAPAAVERAIEAILDASD-ILFIGFGASGIIAQDAQQKFPLFGVPCQAPE 174

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     M     + + +S +G +++   +   A +    +I++T    S ++  AD
Sbjct: 175 DFHQQFIAATMSGPRSVTVAISNTGHTEQTLTVARAAHKAGGTVISLTGR-VSPLSELAD 233

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I L              P+TS +  L + D LA  +   R+
Sbjct: 234 IPLV--VRTFEDTDVYTPSTSRLAGLVVIDILATGVALRRS 272


>gi|320009351|gb|ADW04201.1| transcriptional regulator, RpiR family [Streptomyces flavogriseus
           ATCC 33331]
          Length = 305

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/128 (27%), Positives = 53/128 (41%), Gaps = 1/128 (0%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+G S  +G  LA  L   G  +        +  +   +   D+ I ++ SGS+ ++ 
Sbjct: 154 IYGVGASSLVGQDLAQKLLRIGLIAHAHMDPHLAVTNAVQLRSGDVAIAITHSGSTGDVI 213

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
             L  A       IAIT      V+ +AD VLT     ES     A  +S   QL + D 
Sbjct: 214 EPLRVAFDRGATTIAITGRPDGPVSQYADHVLTTSTARESE-LRPAAMSSRTSQLLVVDC 272

Query: 189 LAIALLES 196
           L I + + 
Sbjct: 273 LFIGVAQR 280


>gi|161522942|ref|YP_001585871.1| signal-transduction protein [Burkholderia multivorans ATCC 17616]
 gi|160346495|gb|ABX19579.1| putative signal-transduction protein with CBS domains [Burkholderia
           multivorans ATCC 17616]
          Length = 162

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 10/141 (7%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKG 265
                G++ +    +             C   +    +     G + V+   +      G
Sbjct: 5   HAKDNGSVIMHIGRISTQPVESC--TAECSAFELADRMRHAHVGDIVVIEYRNGEAIPIG 62

Query: 266 IITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           ++T+ D+      +  N   ++   +M +   V+ +   + VA++ +R+  I  L VVDD
Sbjct: 63  LVTDRDLVIEVMARGDNPGDVTAGQIMSRGLVVVSDTDEIGVALEEMRRSGIRRLPVVDD 122

Query: 323 CQKAIGIVHFLDLLR--FGII 341
             +  GIV   D++    G++
Sbjct: 123 AGRLAGIVTLDDIVEHLAGLL 143


>gi|14520783|ref|NP_126258.1| hypothetical protein PAB0389 [Pyrococcus abyssi GE5]
 gi|5457999|emb|CAB49489.1| Hypothetical protein [Pyrococcus abyssi GE5]
          Length = 174

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 27/139 (19%), Positives = 58/139 (41%), Gaps = 20/139 (14%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEG 270
                +    +      +P+V+   P++DA+ IL  +    V VV+  E  +L G+I   
Sbjct: 8   NAFHSMKLKQITPPLSQMPIVEEDSPIVDALKILRTRHH--VWVVNNKEDMRLVGVIRYQ 65

Query: 271 DI-------FRNFHKDLNTL---------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           D+        R     +++L            ++M +N   I E+  +  A++ + ++ +
Sbjct: 66  DVMEILLPPRRARLGTISSLFKSILGGAQKAGEIMERNVLTIDENVTVLEALEKMNRYRV 125

Query: 315 SVLMVVDDCQKAIGIVHFL 333
            +L +VD+  +  G V   
Sbjct: 126 PILALVDEDGRLKGEVSLR 144



 Score = 36.0 bits (82), Expect = 8.3,   Method: Composition-based stats.
 Identities = 12/73 (16%), Positives = 38/73 (52%), Gaps = 9/73 (12%)

Query: 271 DIFRNFHKDLNTLSVEDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQK 325
           D+ R  +   +++ ++ +     + P  + ED+ +  A+++LR  +   + VV+  +  +
Sbjct: 2   DLERALNA-FHSMKLKQITPPLSQMPI-VEEDSPIVDALKILRTRH--HVWVVNNKEDMR 57

Query: 326 AIGIVHFLDLLRF 338
            +G++ + D++  
Sbjct: 58  LVGVIRYQDVMEI 70


>gi|114562986|ref|YP_750499.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
 gi|114334279|gb|ABI71661.1| cyclic nucleotide-binding protein [Shewanella frigidimarina NCIMB
           400]
          Length = 625

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 56/139 (40%), Gaps = 10/139 (7%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVD------EGQ 261
            G       +  S V       P+V      +     I++E+    V + D      +  
Sbjct: 139 KGKTDDANALTTSKVKTLVTREPVVLSCHSSIQVVAKIMAEQNISAVLINDPDIDDQQDS 198

Query: 262 KLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              GIITE D+  +     +N    +  VM  +   +  +  +  AM L+ ++NI  L +
Sbjct: 199 SFVGIITEHDLCAKVIAAGVNVDNPISQVMSTSLISLDHNAYIFEAMLLMLRNNIDHLPI 258

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +   +K IG++   D++R+
Sbjct: 259 L-KNKKPIGLIEVADIIRY 276


>gi|330504662|ref|YP_004381531.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas mendocina
           NK-01]
 gi|328918948|gb|AEB59779.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas mendocina
           NK-01]
          Length = 489

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 59/173 (34%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLLSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D   +  +     V V+     L GI+T  D+   F   L+ L V DV
Sbjct: 96  DPITIEADATVRDLFELTRQNNISGVPVL-SNGDLVGIVTSRDVR--FENRLDAL-VRDV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H I  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVKEGATKETVRELLHKHRIEKVLIVDDAFTLKGMMTVKDIEKAK 204


>gi|126696743|ref|YP_001091629.1| nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9301]
 gi|126543786|gb|ABO18028.1| Nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9301]
          Length = 356

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS-VEDVMIK 291
           V I   + +AI  +++  F    V +E   L+GIIT+ D+ R     ++  S + DV+  
Sbjct: 15  VNIKDNVGEAIQKINKGGFQICLVFNEQNYLEGIITDSDLRRGILNGVSKSSKLSDVINY 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            P  + E        +L+ +++I  + +VD+  K  GI
Sbjct: 75  QPIKVHEFLSEEKIYRLMIKNHIFHIPLVDENNKFKGI 112


>gi|313899114|ref|ZP_07832640.1| putative inosine-5'-monophosphate dehydrogenase [Clostridium sp.
           HGF2]
 gi|312956107|gb|EFR37749.1| putative inosine-5'-monophosphate dehydrogenase [Clostridium sp.
           HGF2]
          Length = 504

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 68/171 (39%), Gaps = 13/171 (7%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCA 220
            KE         P  SAIMQ   G+ +A AL       F      + +    +  +    
Sbjct: 43  GKEEPELSLN-IPMVSAIMQSVSGEKMACALAREGGISFIYGSQTIENEAAMVRRVKATK 101

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFH 277
           +  ++S  +   ++    L D + +  E     +AV ++G    KL GIIT  D      
Sbjct: 102 AGFVYSDSN---IRPDATLQDVLDLKDETGHATMAVTEDGTPEGKLLGIITSRDYR--TS 156

Query: 278 KDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +   +  V D M    K+I   E   L+ A  ++ +H ++ L ++D+ Q  
Sbjct: 157 RMDPSTKVADFMTPFEKLIYGNEGCTLSEANDMIWEHKLNQLPIIDENQHL 207


>gi|256811136|ref|YP_003128505.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
 gi|256794336|gb|ACV25005.1| CBS domain containing membrane protein [Methanocaldococcus fervens
           AG86]
          Length = 176

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF-RNFHKDL--N 281
                +V     + D   ++ +     V V+     ++  G+ T+ D+  +   K L  +
Sbjct: 11  MREPIIVSGDISVYDVAKLMVKDDMPSVLVIRGKPNKERIGVATDEDLINKVLIKKLPPD 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + +ED+      +I  DT +  A++++R   +  L +VD+  + IG++   D+++
Sbjct: 71  KVKIEDIASDKLVIIPPDTPIDEALRIMRDRGVKELFIVDEKGEIIGVITENDIMK 126


>gi|226363111|ref|YP_002780893.1| RpiR family transcriptional regulator [Rhodococcus opacus B4]
 gi|226241600|dbj|BAH51948.1| putative RpiR family transcriptional regulator [Rhodococcus opacus
           B4]
          Length = 289

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 3/160 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           + L  +L       F  AV  +   + RV++ G G SG   + LA      G  +     
Sbjct: 114 TDLAGALAPLDEDAFERAVTALAEAE-RVLVVGNGGSGPSAATLAVRFILNGRHAEAPTD 172

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A       G +T  D+ + +S SG +      +  AR     +I +TS  +S +   +DI
Sbjct: 173 AVIQQLTAGRLTSRDVCLAVSDSGLNSVTLRPVEAARAAGATVIGVTSYARSTLVEKSDI 232

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            L +           A  ++ ++Q+A   +L IA+  +R 
Sbjct: 233 GLVIGGGTGPWGGLGA--SATVVQIAFLISLQIAVSRARG 270


>gi|324990026|gb|EGC21967.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK353]
          Length = 283

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKEKIFNSFWENQKLNGYYR 277

Query: 219 CASD 222
             + 
Sbjct: 278 RNTH 281


>gi|303245446|ref|ZP_07331730.1| Polynucleotide adenylyltransferase region [Desulfovibrio
           fructosovorans JJ]
 gi|302493295|gb|EFL53157.1| Polynucleotide adenylyltransferase region [Desulfovibrio
           fructosovorans JJ]
          Length = 931

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 4/102 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIF-RNFHKDLNTLSVEDVMIKNPK 294
             +  A  I++      + VV +  K   G+I E DI  +  +  L  + V + MI+ P 
Sbjct: 338 ATMRRAEEIMTRYGLKALPVVSKKGKRCVGVI-EHDIMDKAINHGLGDVPVSEYMIREPA 396

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+  DT L   M+++      +  VV +  K +G+V   D++
Sbjct: 397 VVTPDTDLYPVMEIILGRRQRLAPVV-EAGKLVGVVTRTDIV 437



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLRFGI 340
           V  +M K    I E   +  A +++ ++ +  L VV    K  +G++   D++   I
Sbjct: 323 VRQLMSKPAVSIEEWATMRRAEEIMTRYGLKALPVVSKKGKRCVGVIE-HDIMDKAI 378



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/74 (18%), Positives = 25/74 (33%), Gaps = 1/74 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +           +      +V     L   + I+  +R     VV E  KL G++T  
Sbjct: 376 KAINHGLGDVPVSEYMIREPAVVTPDTDLYPVMEIILGRRQRLAPVV-EAGKLVGVVTRT 434

Query: 271 DIFRNFHKDLNTLS 284
           DI     K+ + + 
Sbjct: 435 DIVNTLVKEPSRIP 448


>gi|294501550|ref|YP_003565250.1| acetoin utilization protein AcuB [Bacillus megaterium QM B1551]
 gi|294351487|gb|ADE71816.1| acetoin utilization protein AcuB [Bacillus megaterium QM B1551]
          Length = 213

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 19/110 (17%), Positives = 43/110 (39%), Gaps = 9/110 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSVE 286
               + +A+ +L   +   + +V++   + GII++ D+           +   L +  V 
Sbjct: 16  PDHTIAEAMKLLDTHKIRHIPIVNDLHHVVGIISDRDVRDASPSILDNTYTSALLSEPVR 75

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +M K          +     +  +H I  + V    ++ +G+V   DLL
Sbjct: 76  MIMQKEVITAHPLDFVEEIASIFYEHQIGCIPVT-KNKRLVGVVTERDLL 124



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M  +   +  D  +  AM+LL  H I  + +V+D    +GI+   D
Sbjct: 3   VEEMMKTDLVTLTPDHTIAEAMKLLDTHKIRHIPIVNDLHHVVGIISDRD 52


>gi|293376617|ref|ZP_06622845.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325839348|ref|ZP_08166787.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|292644843|gb|EFF62925.1| SIS domain protein [Turicibacter sanguinis PC909]
 gi|325490468|gb|EGC92784.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 273

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 33/157 (21%), Positives = 69/157 (43%), Gaps = 3/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + SLE++       +       I+     V + G+G SG    + +S     G     + 
Sbjct: 97  IKSLENTKHLLDDLEIKHGCALIEQT-NNVYVYGVGSSGLSAREASSKFLRVGKHIEAIT 155

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +     +   ++++D++I ++ +GS+ +L   +  A+     +IAITS  KS +  +AD
Sbjct: 156 DSHFQAINSATLSQEDVVIAITITGSTIDLLDSVKIAKERGCKIIAITSYIKSPITKYAD 215

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +VL    +      G    ++ + QL + + L I  +
Sbjct: 216 VVLLTSGKENPLEGGSL--SAKMSQLFMIELLCIGYM 250


>gi|194433960|ref|ZP_03066232.1| transcriptional regulator, rpiR family [Shigella dysenteriae 1012]
 gi|194417832|gb|EDX33929.1| transcriptional regulator, rpiR family [Shigella dysenteriae 1012]
 gi|332095242|gb|EGJ00269.1| helix-turn-helix domain, rpiR family protein [Shigella dysenteriae
           155-74]
          Length = 285

 Score = 69.5 bits (169), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 75/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINHAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|320011947|gb|ADW06797.1| IMP dehydrogenase family protein [Streptomyces flavogriseus ATCC
           33331]
          Length = 524

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 60/173 (34%), Gaps = 10/173 (5%)

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMH 225
                  P   A M    G  +A  +           D     P   +  +         
Sbjct: 83  DGSGTTIPLVVANMTAIAGRRMAETIARRGGLVVIPQDI----PIEVVTEVIGWVKKRHL 138

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             D+  ++  G  + DA+++L ++  G   VVD G +  G++T+ D+            +
Sbjct: 139 VLDTPIVLAPGQTVADALSLLHKRAHGAGVVVDAGNRPVGVVTDHDL----TGVDRFTQL 194

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +VM K+  V+  D     A   L   N  +   VD   + +GI+     LR 
Sbjct: 195 SEVMSKDLVVLDADIDPREAFNKLDGANRKLAPAVDADGRLVGILTRKAALRA 247


>gi|207742004|ref|YP_002258396.1| cbs-domain-containing membrane protein [Ralstonia solanacearum
           IPO1609]
 gi|206593390|emb|CAQ60317.1| cbs-domain-containing membrane protein [Ralstonia solanacearum
           IPO1609]
          Length = 378

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP---LVKIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P    V     +  A+ +L      
Sbjct: 208 WLDIDPEDLTALLQEMQQQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVK 267

Query: 253 CVAVVDEGQKLKGIITEGD------------IFRNFHKDLNTLS-VEDVMIKNPKVILED 299
            + V+D+G++L GI+T  D            +   F     T   V  VM      I  D
Sbjct: 268 SLPVLDDGRRLIGIVTRADLTGTAARAPRQRLRDWFAIGAMTPPRVSGVMTPRVLTIRAD 327

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + L        + VVD   +  GI+   D++  
Sbjct: 328 APMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHA 366



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ DI    ++
Sbjct: 324 IRADAPMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHALYR 369


>gi|171780209|ref|ZP_02921113.1| hypothetical protein STRINF_01997 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
 gi|171281557|gb|EDT46992.1| hypothetical protein STRINF_01997 [Streptococcus infantarius subsp.
           infantarius ATCC BAA-102]
          Length = 219

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +     ++ E+    + V+ E  +L GI+TE  +                +  L
Sbjct: 14  VSPDTTVAHTADMMREQGLRRLPVI-ENDRLVGIVTERTMAEASPSKATSLSIYEMNYLL 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + D+MI++   +     L  A+  + ++++ +L VV +  +  G++   D+ + 
Sbjct: 73  NKTKIRDIMIRDVITVSPYASLEDAVYAMMKNHVGILPVV-ESGQVYGVITEKDVFKA 129



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M +    +  DT +     ++R+  +  L V+++  + +GIV 
Sbjct: 1   MAVKDFMTRKVVYVSPDTTVAHTADMMREQGLRRLPVIEND-RLVGIVT 48


>gi|167746137|ref|ZP_02418264.1| hypothetical protein ANACAC_00833 [Anaerostipes caccae DSM 14662]
 gi|167654652|gb|EDR98781.1| hypothetical protein ANACAC_00833 [Anaerostipes caccae DSM 14662]
          Length = 286

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 5/167 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           +     + L +L S+L  ++  Q       I      V I   G +  I   L+  L+  
Sbjct: 97  TFERNIQNLRNLSSNLSKDVLLQ----CALILLKAPAVHIIATGNTTPIALDLSFRLSRF 152

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  SF    +E    ++ + +++D++I +S SG+S ++      A+   + +I+ITS++ 
Sbjct: 153 GVQSFSSSISEYYLNNVSLGSKEDVVIAISGSGTSKQVLQAADIAKDIGMTIISITSDSD 212

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           S +A  +D +L+  +E         P +  +  +AI D L  A+   
Sbjct: 213 SPLARVSDHILSSSEEHPLFNETKEPLSH-LCSMAICDTLLYAVKIC 258


>gi|314933857|ref|ZP_07841222.1| CBS domain protein [Staphylococcus caprae C87]
 gi|313654007|gb|EFS17764.1| CBS domain protein [Staphylococcus caprae C87]
          Length = 432

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/216 (17%), Positives = 81/216 (37%), Gaps = 20/216 (9%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS----VVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           EL+ IL Y        + I           +     I++T   +P       A      +
Sbjct: 104 ELQDILKYI---GSHTLLIVGNRADVQMEALKRDTAILITGGFQPSKEVVEYANEHELPI 160

Query: 182 QLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
             +  D   +A + +R              K+    +   D++   + + ++     + D
Sbjct: 161 ISSSYDTFLVANIINRAMY---------NQKIRKEILVVEDIVKPINELSVLFDYMKIND 211

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
              + ++       +V+E  KL GI+T  +I     +D     +  +M +NP  +     
Sbjct: 212 YKKLANDTGHTRFPIVNEDFKLVGIVTSREIINMNEED----ELGKIMTRNPLSVKLTNT 267

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +     ++    I +L V ++ +KAIG+++  D+L+
Sbjct: 268 VASCAHMMIWEGIELLPVTNNNKKAIGVINRQDVLK 303


>gi|301111822|ref|XP_002904990.1| inosine-5'-monophosphate dehydrogenase 2 [Phytophthora infestans
           T30-4]
 gi|262095320|gb|EEY53372.1| inosine-5'-monophosphate dehydrogenase 2 [Phytophthora infestans
           T30-4]
          Length = 528

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 13/185 (7%)

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGT 215
           + L          H   P  S+ M      A+AI  AL         +  V     ++  
Sbjct: 49  VHLDTKVSRNISLH--LPLVSSPMDTVTEHAMAIGMALHGGIGIIHYNMTVEEQVKEVRL 106

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDI 272
           +    +  +     +        L D   I +E  F  + + + G+    L GI++  DI
Sbjct: 107 VKKFKNGFITDPKCL---SPEDTLADVDRIKAEFGFAGIPITESGKVGSVLAGIVSNRDI 163

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
             +F +D     +++VM  N     E   LT A ++LR+     L +V+   + + ++  
Sbjct: 164 --DFIED-RQTKLKEVMSTNLVTAPEGVSLTEANRILRESKKGKLPIVNAKGEFVSLISR 220

Query: 333 LDLLR 337
            DL++
Sbjct: 221 RDLVK 225


>gi|209517406|ref|ZP_03266248.1| CBS domain containing protein [Burkholderia sp. H160]
 gi|209502173|gb|EEA02187.1| CBS domain containing protein [Burkholderia sp. H160]
          Length = 141

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     +  A  ++++   G + V D G++L G +T+ DI  R     ++   
Sbjct: 8   MTHDAVSIGATDTIRQAAMMMADHEVGSLPVCD-GEELVGTVTDRDIAVRAVASGVDPAA 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V ++  ++ +   ED  +    + +    I  + V+D  +  +GIV   D+
Sbjct: 67  PVIEIATQHVQWCYEDDDINDVKRKMAGRRIRRVPVLDHEKHLVGIVSLGDI 118



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 21/53 (39%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             V +VM  +   I     +  A  ++  H +  L V D  +  +G V   D+
Sbjct: 2   TKVAEVMTHDAVSIGATDTIRQAAMMMADHEVGSLPVCDGEE-LVGTVTDRDI 53



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 23/55 (41%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
             A  +  +   +        + D    ++ +R   V V+D  + L GI++ GDI
Sbjct: 64  PAAPVIEIATQHVQWCYEDDDINDVKRKMAGRRIRRVPVLDHEKHLVGIVSLGDI 118


>gi|149174232|ref|ZP_01852859.1| CBS domain protein [Planctomyces maris DSM 8797]
 gi|148846777|gb|EDL61113.1| CBS domain protein [Planctomyces maris DSM 8797]
          Length = 168

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 10/122 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHKDLN- 281
               + +V     L + I  L + +     VV   D+ Q L G ++E D       ++  
Sbjct: 14  MNRHVQVVTQDMSLTEVIRFLLKHKISNAPVVELQDQKQILVGFVSERDCLSALSNEVFF 73

Query: 282 -----TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  +V  +M  +P  I  +T L   + +   H++  L VV       GIV   ++L
Sbjct: 74  GNPSPAQTVRTIMSSHPICITPETELFSIVSIFVSHHLRHLPVV-QNGVLKGIVSRREIL 132

Query: 337 RF 338
             
Sbjct: 133 EA 134



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQKAIGIVHF 332
                 T    D M ++ +V+ +D  LT  ++ L +H IS   VV   D  Q  +G V  
Sbjct: 1   MTDQQKTPCAADFMNRHVQVVTQDMSLTEVIRFLLKHKISNAPVVELQDQKQILVGFVSE 60

Query: 333 LDLLRF 338
            D L  
Sbjct: 61  RDCLSA 66


>gi|68248751|ref|YP_247863.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           86-028NP]
 gi|145628440|ref|ZP_01784240.1| hypothetical protein CGSHi22121_05480 [Haemophilus influenzae
           22.1-21]
 gi|145635310|ref|ZP_01791013.1| N-acetylmannosamine kinase [Haemophilus influenzae PittAA]
 gi|68056950|gb|AAX87203.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           86-028NP]
 gi|144978910|gb|EDJ88596.1| hypothetical protein CGSHi22121_05480 [Haemophilus influenzae
           22.1-21]
 gi|145267454|gb|EDK07455.1| N-acetylmannosamine kinase [Haemophilus influenzae PittAA]
          Length = 288

 Score = 69.5 bits (169), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|270264480|ref|ZP_06192746.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
 gi|270041616|gb|EFA14714.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
          Length = 278

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 34/165 (20%), Positives = 66/165 (40%), Gaps = 9/165 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L        S Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLA---MQTSSEQLDRAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFTEQLSMVKPKDVVIAISYSPYAQEALELVELGAKRGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +D+        E+   G     +++  LA   A+++AL  +++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAKD 277


>gi|222099316|ref|YP_002533884.1| transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
 gi|221571706|gb|ACM22518.1| transcriptional regulator, RpiR family [Thermotoga neapolitana DSM
           4359]
          Length = 280

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 62/162 (38%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + ++  +L          AVE  +  + R++  G   S  +           G    
Sbjct: 102 KATVRAILDTLNSIDVESIKKAVEMFREAR-RIIFIGFAASAAVAFDAFHKFTRIGKNCL 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F +        L   +  DL++ +S +G +  +      AR   IP++AIT   KS +A 
Sbjct: 161 FSNDEHIIATILATASPGDLLVAVSHTGETISVVNFARKAREMRIPVVAITGNKKSTLAK 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++D+VL      +         TS I+QL I D +   L   
Sbjct: 221 YSDVVLVT--NTKETKIRTDAMTSRIVQLVILDTIYTLLAAR 260


>gi|189348228|ref|YP_001941424.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|189338366|dbj|BAG47434.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
          Length = 170

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/141 (17%), Positives = 54/141 (38%), Gaps = 10/141 (7%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKG 265
                G++ +    +             C   +    +     G + V+   +      G
Sbjct: 13  HAKDNGSVIMHIGRISTQPVESC--TAECSAFELADRMRHAHVGDIVVIEYRNGEAIPIG 70

Query: 266 IITEGDIF-RNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           ++T+ D+      +  N   ++   +M +   V+ +   + VA++ +R+  I  L VVDD
Sbjct: 71  LVTDRDLVIEVMARGDNPGDVTAGQIMSRGLVVVSDTDEIGVALEEMRRSGIRRLPVVDD 130

Query: 323 CQKAIGIVHFLDLLR--FGII 341
             +  GIV   D++    G++
Sbjct: 131 AGRLAGIVTLDDIVEHLAGLL 151


>gi|145633570|ref|ZP_01789298.1| N-acetylneuraminate lyase [Haemophilus influenzae 3655]
 gi|229845445|ref|ZP_04465575.1| N-acetylmannosamine kinase [Haemophilus influenzae 6P18H1]
 gi|144985776|gb|EDJ92390.1| N-acetylneuraminate lyase [Haemophilus influenzae 3655]
 gi|229811641|gb|EEP47340.1| N-acetylmannosamine kinase [Haemophilus influenzae 6P18H1]
          Length = 288

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|145631626|ref|ZP_01787391.1| N-acetylmannosamine kinase [Haemophilus influenzae R3021]
 gi|145639801|ref|ZP_01795403.1| N-acetylmannosamine kinase [Haemophilus influenzae PittII]
 gi|148825589|ref|YP_001290342.1| N-acetylmannosamine kinase [Haemophilus influenzae PittEE]
 gi|229847261|ref|ZP_04467364.1| N-acetylmannosamine kinase [Haemophilus influenzae 7P49H1]
 gi|319898111|ref|YP_004136308.1| hth-type transcriptional regulator [Haemophilus influenzae F3031]
 gi|144982760|gb|EDJ90289.1| N-acetylmannosamine kinase [Haemophilus influenzae R3021]
 gi|145271169|gb|EDK11084.1| N-acetylmannosamine kinase [Haemophilus influenzae PittII]
 gi|148715749|gb|ABQ97959.1| N-acetylmannosamine kinase [Haemophilus influenzae PittEE]
 gi|229809804|gb|EEP45527.1| N-acetylmannosamine kinase [Haemophilus influenzae 7P49H1]
 gi|301168796|emb|CBW28387.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           10810]
 gi|309750439|gb|ADO80423.1| Putative transcriptional regulator [Haemophilus influenzae R2866]
 gi|317433617|emb|CBY82001.1| putative HTH-type transcriptional regulator [Haemophilus influenzae
           F3031]
          Length = 288

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQTAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|325696667|gb|EGD38556.1| CBS domain protein [Streptococcus sanguinis SK160]
          Length = 209

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/117 (26%), Positives = 52/117 (44%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIVH 331
           ++++  V   M + P  K   +D  +  A  +L+   I  L V  VD+ +K +G V 
Sbjct: 134 NIDSTPVAVCMTRMPHIKTCYKDMNILEAAAVLQDFAIDSLPVVDVDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|254509884|ref|ZP_05121951.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
 gi|221533595|gb|EEE36583.1| CBS domain protein [Rhodobacteraceae bacterium KLH11]
          Length = 145

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 5/110 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFRNFHK---DLNTLSVEDV 288
           V+    +  A  IL+ +R G V + ++G +   GI++E DI R             V   
Sbjct: 18  VEPSATVSQAAEILATRRIGTVIISEDGGQTALGILSERDIVRELAASGSGCLGKPVSAY 77

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M ++     +   +   +  + +     + VV +  K IGIV   D ++ 
Sbjct: 78  MTRDLVTATQQDSVEAILSRMTEGRFRHMPVV-EDGKLIGIVTLGDAVKA 126


>gi|218692545|ref|YP_002400757.1| putative Transcriptional regulator [Escherichia coli ED1a]
 gi|218430109|emb|CAR11105.2| putative Transcriptional regulator [Escherichia coli ED1a]
          Length = 274

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 60/143 (41%), Gaps = 4/143 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +    + L      L   L      A+ + ++    V I G+  S  +G  L   L   
Sbjct: 94  VVNESVQALQDTAKLLDRTLLEAATLALHQAQS----VQIYGVAASAILGEYLHYKLLRL 149

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+        +  +   ++++  ++ +S SGS+ +L  ++  AR+  + ++A+++  +
Sbjct: 150 GKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPR 209

Query: 150 SVVACHADIVLTLPKEPESCPHG 172
           S +A  +DI L   K       G
Sbjct: 210 SPLASLSDIQLVAAKPEGPLSAG 232


>gi|52549696|gb|AAU83545.1| conserved hypothetical protein [uncultured archaeon GZfos30H9]
          Length = 271

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +      + E   G V +   G K  G++T+ DI        K  + +  +D+M
Sbjct: 153 VDEDTVVSKISKDMEESEIGGVVIT-RGGKPIGMVTDRDIASKVIMADKKASEIKAKDIM 211

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 I  +  +  A  ++   +I  + V+D+  K +GI+   ++L
Sbjct: 212 CSPLTTIGPEASVEKACGIMAAKDIRRMPVMDED-KLVGIISVRNIL 257



 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIK 291
               +      +     G V +  E  K  GI+T+ DI         T   ++V+ +M  
Sbjct: 16  EDTSVTIIARDMELSEIGSVVITRED-KPVGIVTDRDISIKICAKRGTPGEVTVKGIMTS 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +  A  LL +++I  L V+++  K +GI+   ++L
Sbjct: 75  PLITIGPEAPVETACGLLAENDIRRLPVMEND-KLVGIISVRNIL 118



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            +        +  +    P+  A  +L+E     + V+ E  KL GII+  +I     + 
Sbjct: 66  VTVKGIMTSPLITIGPEAPVETACGLLAENDIRRLPVM-ENDKLVGIISVRNILSGAPEY 124

Query: 280 LN------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           +              L V DVM      + EDT+++   + + +  I   +V+    K I
Sbjct: 125 VQRFYPAEGELVPEQLEVGDVMTLEVITVDEDTVVSKISKDMEESEIGG-VVITRGGKPI 183

Query: 328 GIVHFLDLLRFGII 341
           G+V   D+    I+
Sbjct: 184 GMVTDRDIASKVIM 197



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V+DVM        EDT +T+  + +    I  +++  +  K +GIV   D+
Sbjct: 1   MKVKDVMSGPVITEDEDTSVTIIARDMELSEIGSVVITRED-KPVGIVTDRDI 52


>gi|182436108|ref|YP_001823827.1| hypothetical protein SGR_2315 [Streptomyces griseus subsp. griseus
           NBRC 13350]
 gi|178464624|dbj|BAG19144.1| conserved hypothetical protein [Streptomyces griseus subsp. griseus
           NBRC 13350]
          Length = 132

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           +     L  A  ++S +R G   V D      GIITE DI        D +  +      
Sbjct: 14  IGPTHTLRQAARLMSARRIGAAVVHDPDTCGLGIITERDILDAVGSGLDPDRETASAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + +       L+V+D     +GIV   D++R
Sbjct: 74  TDVVFAAPAWTLQEAAEAMTHGGFRHLIVLDSDG-PVGIVSVRDIIR 119



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 20/54 (37%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M      I     L  A +L+    I   +V D     +GI+   D+L  
Sbjct: 3   VRDAMSTVVLTIGPTHTLRQAARLMSARRIGAAVVHDPDTCGLGIITERDILDA 56


>gi|317403319|gb|EFV83833.1| hypothetical protein HMPREF0005_02053 [Achromobacter xylosoxidans
           C54]
          Length = 152

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
               P+  A+  +SE+  G + V+ E   L G++T  +I R+ H        ++  +M  
Sbjct: 19  SPDMPVSQAVQTMSEQDIGSL-VIMEFGTLVGMLTFREIIRHMHAHGGAGETTIRSIMDD 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  APVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLMGVISFYDMAQA 123



 Score = 36.4 bits (83), Expect = 6.8,   Method: Composition-based stats.
 Identities = 8/43 (18%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               D  ++ A+Q + + +I  L+++ +    +G++ F +++R
Sbjct: 17  TASPDMPVSQAVQTMSEQDIGSLVIM-EFGTLVGMLTFREIIR 58


>gi|242399180|ref|YP_002994604.1| Inosine-5'-monophosphate dehydrogenase related protein II
           [Thermococcus sibiricus MM 739]
 gi|242265573|gb|ACS90255.1| Inosine-5'-monophosphate dehydrogenase related protein II
           [Thermococcus sibiricus MM 739]
          Length = 180

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 50/128 (39%), Gaps = 5/128 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+    +          ++K    +     IL++ +    AVV E  ++ GI+T+ DI 
Sbjct: 1   MTMMPKITVEQIVKRKAIVIKPTETVERVAKILAKNKV-SSAVVMEKDEIIGIVTDRDIL 59

Query: 274 RNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                   D   + V  +M K P  I  D  +  A++L+    +  L+V       +G V
Sbjct: 60  NKVVAKGNDPKEVKVSSIMTKTPITIEYDYDIQDAIELMMGKGVRRLLVT-RLGMPMGFV 118

Query: 331 HFLDLLRF 338
              DLL  
Sbjct: 119 TAADLLAA 126


>gi|212709338|ref|ZP_03317466.1| hypothetical protein PROVALCAL_00373 [Providencia alcalifaciens DSM
           30120]
 gi|212688250|gb|EEB47778.1| hypothetical protein PROVALCAL_00373 [Providencia alcalifaciens DSM
           30120]
          Length = 280

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 33/152 (21%), Positives = 62/152 (40%), Gaps = 3/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S++E SL+           +K+   K R+V+ GIG S  + + +          + F  
Sbjct: 105 ISAIEKSLELLEPAAVDAVAQKLVEAK-RIVLFGIGSSAIVANDIFHKFIRVNKSALFSP 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DL I ++  G++ E+  +L  A       IA+T   +   A  AD
Sbjct: 164 DLHVQLSYSANLGDGDLAIAVTARGNTPEVNRMLKSAHDNGCTTIALTRFGQDDAARLAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++L    + +    G+   T  ++Q+ I D L
Sbjct: 224 LILPYYYDEQHSQLGVI--TPQVLQMVIFDTL 253


>gi|94309528|ref|YP_582738.1| CBS domain-containing protein [Cupriavidus metallidurans CH34]
 gi|93353380|gb|ABF07469.1| CBS-domain-containing membrane protein [Cupriavidus metallidurans
           CH34]
          Length = 376

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 69/183 (37%), Gaps = 7/183 (3%)

Query: 163 PKEPESCPH--GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCA 220
           P EP S      + P+       A  DA+  A  E  +  E+D   +    +L       
Sbjct: 185 PPEPPSQHLTKDVPPSRRVGFTRADLDAVLAARGEFLDIEEDDLEAILVAAELRAYSRRF 244

Query: 221 SDVMHSGDSIP---LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            DV  S         V+ G    DA  +L+      + VVD  ++L GI+T+ D FR   
Sbjct: 245 GDVRCSDIMSRDVVAVRPGQRAADAAALLARHHIKALPVVDGNRRLLGIVTQSDFFRAHR 304

Query: 278 KDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   +  +V D+M +       D  +           +  + VVD  +  +G+V   DL
Sbjct: 305 SNSRRVNGTVRDLMTRVVVTAHVDQPMVELAHAFSDGGLHHVPVVDGDRHVVGMVTQSDL 364

Query: 336 LRF 338
           +  
Sbjct: 365 VAA 367



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 13/81 (16%), Positives = 34/81 (41%), Gaps = 7/81 (8%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDAITILSEKRFGCVAVV 257
           +++DF+  H      +     +  +    +  +V   +  P+++     S+     V VV
Sbjct: 295 TQSDFFRAH-----RSNSRRVNGTVRDLMTRVVVTAHVDQPMVELAHAFSDGGLHHVPVV 349

Query: 258 DEGQKLKGIITEGDIFRNFHK 278
           D  + + G++T+ D+     +
Sbjct: 350 DGDRHVVGMVTQSDLVAALLR 370


>gi|254501194|ref|ZP_05113345.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
 gi|222437265|gb|EEE43944.1| hypothetical protein SADFL11_1230 [Labrenzia alexandrii DFL-11]
          Length = 143

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 4/107 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNP 293
            P+ +   IL++ + G V + D  + ++GI++E D+ R          +  V  +M K+ 
Sbjct: 21  APVSEIAEILAKNKIGAVVLCDGDRHIEGIVSERDVVRLVGLQGASALSQPVSSIMTKDV 80

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               E       M  + +     + VV +  K IG++   D+++  I
Sbjct: 81  MTCTEMDAANEVMGRMNRGRFRHMPVV-EDGKLIGVISIGDVVKHKI 126



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%)

Query: 283 LSVEDVM-IKNPKVILEDTLL--TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++V  +M  K    I  D     +   ++L ++ I  +++ D  +   GIV   D++R 
Sbjct: 1   MTVAAIMKTKGHDTITADKSAPVSEIAEILAKNKIGAVVLCDGDRHIEGIVSERDVVRL 59


>gi|194332972|ref|YP_002014832.1| glucosamine--fructose-6-phosphate aminotransferase
           [Prosthecochloris aestuarii DSM 271]
 gi|194310790|gb|ACF45185.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Prosthecochloris aestuarii DSM 271]
          Length = 614

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/144 (25%), Positives = 62/144 (43%), Gaps = 10/144 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           +E+IK  + R+VI   G S H   IG  L    A       +            ++ ++D
Sbjct: 293 LEQIKGAR-RIVICACGTSWHAGLIGEYLIEEFARISVEVDYASE---FRYRNPILDKND 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     +I I +   S +A      +     PE    G+
Sbjct: 349 VVIVISQSGETADTLAALRLAKEKGATVIGICNVVGSTIARETHCGMYTHAGPE---IGV 405

Query: 174 APTTSAIMQLAIGDALAIALLESR 197
           A T +   Q+ +   LA+AL + R
Sbjct: 406 ASTKAFTAQVIVLYLLALALSKGR 429


>gi|193084191|gb|ACF09856.1| putative signal transduction protein [uncultured marine
           crenarchaeote AD1000-207-H3]
          Length = 131

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 53/114 (46%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
              ++  ++     +DA  ++SEK      V+ +     G+++E D  +    +    S 
Sbjct: 1   MEKNVITIEHDKTALDAARLISEKDV-SFLVIMKNNAPVGVLSESDFVKRLAANDKKASA 59

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + ++M    + +  +T L  A+Q +  +NI  L+++DD  + +G++   DL 
Sbjct: 60  VIISEIMSSKFRWVEPETELEDAIQKMLNNNIRRLVILDD-NRLVGVITQTDLT 112



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 33/91 (36%), Gaps = 4/91 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE+DF                            V+    L DAI  +       + ++D
Sbjct: 41  LSESDFVKR--LAANDKKASAVIISEIMSSKFRWVEPETELEDAIQKMLNNNIRRLVILD 98

Query: 259 EGQKLKGIITEGDIFRNF-HKDLNTLSVEDV 288
           +  +L G+IT+ D+      K L   +++++
Sbjct: 99  DN-RLVGVITQTDLTGFLRDKLLVDKTIKNI 128



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KN   I  D     A +L+ + ++S L+++      +G++   D ++
Sbjct: 1   MEKNVITIEHDKTALDAARLISEKDVSFLVIM-KNNAPVGVLSESDFVK 48


>gi|149926364|ref|ZP_01914625.1| hypothetical protein LMED105_13233 [Limnobacter sp. MED105]
 gi|149824727|gb|EDM83941.1| hypothetical protein LMED105_13233 [Limnobacter sp. MED105]
          Length = 157

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----------LN 281
           V     L D +  +++   G + V+D+   L GI+T  ++ R   K            + 
Sbjct: 17  VTPETNLSDCVVTMADHDVGSLVVMDK-GVLAGIVTFREVIRVLAKRQKEHRTGPTPPVA 75

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V +VM   P V   D  +    +L+ +++   L V+D      G++ F D+ + 
Sbjct: 76  EIVVREVMNTEPTVATLDMEVDSLRKLMLENHQRYLPVMD-GNTLCGVISFHDVAKA 131


>gi|218281468|ref|ZP_03487911.1| hypothetical protein EUBIFOR_00476 [Eubacterium biforme DSM 3989]
 gi|218217390|gb|EEC90928.1| hypothetical protein EUBIFOR_00476 [Eubacterium biforme DSM 3989]
          Length = 186

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 13/181 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L  +L    S Q    VE +   K  V   G G+SG      A  L   G  S+ V 
Sbjct: 11  LRELTHTLTRIDSEQAEKFVELVDGAK-EVFCAGAGRSGFEIKGFAMRLMHMGIASYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                +     I  + ++++ S SGS+  L      A+     +  IT  ++S +A  AD
Sbjct: 70  ETCTPN-----IDENGVLVICSGSGSTKSLVNHAQKAKEVGAKIALITINSESPIAKLAD 124

Query: 158 IVLTLPKE-----PESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLHPG 210
           +V+ +         +     + P  S   Q      D   + L+E R+   +  +  H  
Sbjct: 125 VVVEISAPSPKSAKQGDIKSIQPMGSLFEQSEGTFMDIAIMMLMERRHMDSDTMFGRHAN 184

Query: 211 G 211
            
Sbjct: 185 M 185


>gi|325525205|gb|EGD03074.1| signal-transduction protein [Burkholderia sp. TJI49]
          Length = 149

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 48/117 (41%), Gaps = 8/117 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHK---DLNTLSVE 286
               C   +    +     G + V+   +      G++T+ D+         D   ++  
Sbjct: 14  CTAECSAFELADRMRHAHVGDIVVIEYRNGEAIPIGLVTDRDLVIEVMARGDDPGDVTAG 73

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR--FGII 341
            +M +   V+ +   + VA++ +R+  I  L VVDD  +  GIV   D++    G++
Sbjct: 74  QIMSRGLVVVSDTDEIGVALEEMRRSGIRRLPVVDDAGRLAGIVTLDDIVEHLAGLL 130



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 17/92 (18%), Positives = 35/92 (38%), Gaps = 7/92 (7%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           G+A+ I L+  R+            G +    + +  ++       +V     +  A+  
Sbjct: 43  GEAIPIGLVTDRDLVIEVMARGDDPGDVTAGQIMSRGLV-------VVSDTDEIGVALEE 95

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +       + VVD+  +L GI+T  DI  +  
Sbjct: 96  MRRSGIRRLPVVDDAGRLAGIVTLDDIVEHLA 127


>gi|162448358|ref|YP_001610725.1| inosine 5-monophosphate dehydrogenase [Sorangium cellulosum 'So ce
           56']
 gi|161158940|emb|CAN90245.1| IMP dehydrogenase [Sorangium cellulosum 'So ce 56']
          Length = 514

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 64/172 (37%), Gaps = 14/172 (8%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCA 220
           P    +      P TSA+MQ   G  LAIAL       F      +      +  +    
Sbjct: 49  PDPRLAPLTISVPVTSAMMQSVSGAELAIALARCGGLSFVYGSQGIEEEAAMVRRVKNYK 108

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFH 277
           +  + S  ++   +    L D + +        +A+ ++G    +  GIIT  D      
Sbjct: 109 AGFVVSDSNL---RPDATLGDVLALTDRTGHSTIAITEDGTPTGRFVGIITSRDYR--LG 163

Query: 278 KDLNTLSVEDVMIKNPKVILEDT---LLTVAMQLLRQHNISVLMVVDDCQKA 326
           K   +  V ++M    K I        L  A +L+ +H ++ L V+D+ Q  
Sbjct: 164 KTPLSTPVREIMTP-FKSIHCGKVGLDLQEANELIWRHKLNTLPVIDERQHL 214


>gi|2661858|emb|CAB06303.1| inosine monophosphate dehydrogenase [Prosthecochloris vibrioformis]
          Length = 521

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 62/174 (35%), Gaps = 17/174 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIAL  +         ++H    +       + V      I  
Sbjct: 69  NLPLVSAAMDTVTEAELAIALARAGGIG-----IIHKNLSIDVQARHVAKVKRFESGIIR 123

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQ-----KLKGIITEGDIFRNFHKDLNTL 283
                     + +AI ++       + VV+         LKGI+T  D+      +    
Sbjct: 124 NPITLFEDATIQEAIDLMLRHSISGIPVVERPTPEGCLLLKGIVTNRDLRMTTSSNEKIT 183

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++      +     ED  L  A ++L Q+ I  L+V+D+     G++ F D+ +
Sbjct: 184 TIIT---TDLITAQEDIDLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDIQK 234


>gi|315640923|ref|ZP_07896019.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Enterococcus italicus DSM
           15952]
 gi|315483341|gb|EFU73841.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Enterococcus italicus DSM
           15952]
          Length = 387

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   +     L +AI ++ +KR   + VVDE   L+G I   D+     +  +  SV +V
Sbjct: 258 NPITITREHSLQEAIRLMRQKRVDTLLVVDESNHLEGYI---DVEVIDRERGSGKSVGEV 314

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           M      + +  LL   ++ +    I  + VVD+ ++ +GI+ 
Sbjct: 315 MNPQVFFVKQSALLRDTLRRILTRGIKYVPVVDEEKRLVGILT 357



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V +V + NP  I  +  L  A++L+RQ  +  L+VVD+     G +
Sbjct: 240 RLLQAKPDATIVGEVALANPITITREHSLQEAIRLMRQKRVDTLLVVDESNHLEGYI 296


>gi|239630199|ref|ZP_04673230.1| CBS domain containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
 gi|239527811|gb|EEQ66812.1| CBS domain containing protein [Lactobacillus paracasei subsp.
           paracasei 8700:2]
          Length = 207

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R  F     TL    VM +
Sbjct: 90  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTNRDTTLPASIVMTR 149

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L VV +      IG + 
Sbjct: 150 MPNVITVTADTSIIAASKLLLKHNVDSLPVVQNVGDTHVIGKIT 193



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 87  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 132


>gi|121710412|ref|XP_001272822.1| IMP dehydrogenase, putative [Aspergillus clavatus NRRL 1]
 gi|119400972|gb|EAW11396.1| IMP dehydrogenase, putative [Aspergillus clavatus NRRL 1]
          Length = 546

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +D+ L  P           P  S+ M       +AI +            V+H       
Sbjct: 68  SDVSLDTPVTKRVSL--KVPLLSSPMDTVTEHNMAIHMALLGGLG-----VIHHNCAPED 120

Query: 216 LFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L          + +A  + ++  FG   V + G    KL G++T
Sbjct: 121 QAEMVRKVKRYENGFILDPVVLSPKATVGEAKELKAQWGFGGFPVTENGTLRSKLVGMVT 180

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F+ +L+   V  +M  +       T L  A  +LR      L +VD+    + 
Sbjct: 181 SRDI--QFYPNLDD-PVTAIMSTDLVTAPAGTTLAEANNVLRSSKKGKLPIVDENGHLVS 237

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 238 LLSRSDLMK 246



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
             G  L +A  +L   + G + +VDE   L  +++  D+ +N H
Sbjct: 206 PAGTTLAEANNVLRSSKKGKLPIVDENGHLVSLLSRSDLMKNLH 249


>gi|18976592|ref|NP_577949.1| hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Pyrococcus furiosus DSM 3638]
 gi|18892157|gb|AAL80344.1| hexulose-6-phosphate synthase (d-arabino 3-hexulose 6-phosphate
           formaldehyde lyase) [Pyrococcus furiosus DSM 3638]
          Length = 434

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 28/135 (20%), Positives = 54/135 (40%), Gaps = 5/135 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           R+I    + ++   + +  +L  +    +        ++ I G G+SG +G   A  L  
Sbjct: 261 RTIKKAMKDITEHINEVADKLKLEEVRGLVDAMIGANKIFIYGAGRSGLVGKAFAMRLMH 320

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
                + V                DL+I +S SG +  +      A++    ++AITS  
Sbjct: 321 LDFNVYVVGETITP-----AFEEGDLLIAISGSGETKTIVDAAEIAKQQGGKVVAITSYR 375

Query: 149 KSVVACHADIVLTLP 163
            S +   AD+V+ +P
Sbjct: 376 DSTLGKLADVVVEIP 390


>gi|46107956|ref|XP_381037.1| hypothetical protein FG00861.1 [Gibberella zeae PH-1]
          Length = 532

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 69/189 (36%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++ L  P           P  S+ M       +AI +            V+H       
Sbjct: 55  SEVTLDSPITKRITL--RTPFVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSPEA 107

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V        +   ++     + +A  +  +  FG   V ++G+   KL GI+T
Sbjct: 108 QADMVRKVKRYENGFINDPIVIDQNTTVGEAKALKEKWGFGGFPVTEDGKLGSKLVGIVT 167

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             D+   F +DL+   V +VM+K+     E   L  A ++L +     L +VD     + 
Sbjct: 168 NRDL--QFEEDLDQA-VSNVMVKDLVTAPETVTLLEANKILSKSKKGKLPIVDKDSNLVS 224

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 225 MISRSDLTK 233


>gi|258623451|ref|ZP_05718454.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258584266|gb|EEW09012.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 271

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/172 (15%), Positives = 58/172 (33%), Gaps = 8/172 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M       +S  +    +  +     A  ++      L      +        +   E +
Sbjct: 65  MALAVDLSQSANQSQPKMDGDICEISAQSAV----DSLMDTAKLIDR---ASLNRICELV 117

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              +  +   G+G S  +G  LA  L   G  +        +    G     D+   +S 
Sbjct: 118 HNAQ-FIGCVGVGASSIVGRYLAYRLVRIGKKAIMYEDTHLAAMSAGRSVSGDVWFAISS 176

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           SGS+ E+      A +  + ++++T+ + S ++  +D +L   +       G
Sbjct: 177 SGSTKEVVHAATQAHQRGVRVVSLTNISHSPLSSISDEMLVAARPEGPLTGG 228


>gi|297200532|ref|ZP_06917929.1| RpiR-family transcriptional regulator [Streptomyces sviceus ATCC
           29083]
 gi|197709656|gb|EDY53690.1| RpiR-family transcriptional regulator [Streptomyces sviceus ATCC
           29083]
          Length = 317

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ + G+G SG +   L   L   G  +        +  +   +   D+ I ++ SG++ 
Sbjct: 166 RIDVYGVGASGLVAQDLTQKLLRIGLIAQAHSDPHLAVTNAVQLRSGDVAIAITHSGATG 225

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +AIT      V  +AD VLT     ES     A  +S   QL +
Sbjct: 226 DVIEPLRVAFEHGATTVAITGRPDGAVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 284

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 285 VDCLFVGVAQR 295


>gi|91069843|gb|ABE10774.1| degT/DnrJ/EryC1/StrS aminotransferase [uncultured Prochlorococcus
           marinus clone ASNC1363]
          Length = 478

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 24/102 (23%), Positives = 51/102 (50%), Gaps = 3/102 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMI 290
           +V+    L +A+ ++++  FG   VV + +KL G++T+GD+ R F +++     +  VM 
Sbjct: 8   IVEHNKSLKEALVVINKNGFGLCFVV-KDKKLLGVVTDGDLRRYFLNENELDCKISKVMN 66

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           K+       T  ++     R++ I  + +V+D    + I   
Sbjct: 67  KSFIYFHVQTDASIIRDAFREN-IKYIPLVNDDFNLVDIASI 107


>gi|327482187|gb|AEA85497.1| CBS domain-containing protein [Pseudomonas stutzeri DSM 4166]
          Length = 379

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKD-----------LNT 282
               +  A   L   R   + VV  +  +L GI+T+ D+ ++FH             L  
Sbjct: 253 PDTFIEQAWQTLQVHRLRSLPVVQGDDHRLVGIVTQVDLLKHFHPRPGRLSFGQLNFLRG 312

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +  +M      +  DT +   + LL    +  L VVD  Q+ +G++   DL+  
Sbjct: 313 TKLRAIMSSPVVSVTADTHMVELVYLLSDRGLHCLPVVDAQQRLVGMITQTDLIAA 368



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 267 ITEGDIFR--------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +T  D+ R           + +  ++   VM ++      DT +  A Q L+ H +  L 
Sbjct: 214 VTRDDLERLIKQTEKHALRRSMGEITAAHVMSRDLYWHTPDTFIEQAWQTLQVHRLRSLP 273

Query: 319 VV-DDCQKAIGIVHFLDLLR 337
           VV  D  + +GIV  +DLL+
Sbjct: 274 VVQGDDHRLVGIVTQVDLLK 293



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 28/51 (54%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           V     +++ + +LS++   C+ VVD  Q+L G+IT+ D+    +++    
Sbjct: 326 VTADTHMVELVYLLSDRGLHCLPVVDAQQRLVGMITQTDLIAALYRNWLKQ 376


>gi|313126729|ref|YP_004036999.1| signal-transduction protein containing camp-binding and cbs domains
           [Halogeometricum borinquense DSM 11551]
 gi|312293094|gb|ADQ67554.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Halogeometricum borinquense DSM 11551]
          Length = 139

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNT 282
               +  V +   L +A+  + E+R G V V+D G     I+T  D     ++D   L  
Sbjct: 7   MSSPVVTVTLDATLREAVRSMLERRVGSVVVLDTG--PISIVTRSDALWGTYQDGGSLAD 64

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++V DVM ++  +  E T +T A+  ++QH +  L V D   + +GI+   D+
Sbjct: 65  IAVTDVMSRDLVMTTEQTSITTALDTMKQHEVKKLPVRD-GMELVGIITMTDI 116


>gi|312962892|ref|ZP_07777379.1| inositol-5-monophosphate dehydrogenase [Pseudomonas fluorescens
           WH6]
 gi|311282919|gb|EFQ61513.1| inositol-5-monophosphate dehydrogenase [Pseudomonas fluorescens
           WH6]
          Length = 356

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 31/173 (17%), Positives = 58/173 (33%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKRYEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D   +        V V+     L GI+T  D+     ++   ++V +V
Sbjct: 96  DPITIEADATVRDLFDLTRLHNISGVPVL-HDGDLVGIVTSRDVRF---ENRLEVTVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H I  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVKEGADKNDVRELLHKHRIERVLIVDDKFALKGMMTVNDIEKAK 204


>gi|146283815|ref|YP_001173968.1| DNA-binding transcriptional regulator HexR [Pseudomonas stutzeri
           A1501]
 gi|145572020|gb|ABP81126.1| transcriptional regulator HexR [Pseudomonas stutzeri A1501]
          Length = 265

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 82  AIASLDSACQSLDPQLVSRAVDLMIQAR-QIHFFGLGASASVALDAQHKF-------FRF 133

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR+    ++ +T+   
Sbjct: 134 NLAVTAHSDVLMQRMLASVAHTGELFVIISYTGRTRELVEVARIARQNGASVLGLTA-AG 192

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 193 SPLAQASTLSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 239


>gi|146308501|ref|YP_001188966.1| inositol-5-monophosphate dehydrogenase [Pseudomonas mendocina ymp]
 gi|145576702|gb|ABP86234.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas mendocina ymp]
          Length = 489

 Score = 69.2 bits (168), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 58/173 (33%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLLSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D   +  +     V V+     L GI+T  D+   F   L+ L V DV
Sbjct: 96  DPITIEADATVRDLFELTRQNNISGVPVL-SNGDLVGIVTSRDVR--FENRLDAL-VRDV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E         LL +H I  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVKEGADKETVRALLHKHRIEKVLIVDDAFNLKGMMTVKDIEKAK 204


>gi|295397624|ref|ZP_06807699.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Aerococcus viridans ATCC
           11563]
 gi|294974087|gb|EFG49839.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Aerococcus viridans ATCC
           11563]
          Length = 406

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 4/128 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F       +  T F+   ++M +        +G  L  AITI+ +     + V+D+   L
Sbjct: 235 FLGEERLMQAQTDFITVKEIMITTPLTA--TLGMSLGKAITIMRDNHVDSLFVIDDDHHL 292

Query: 264 KGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           KG++T  D+         +LSV DVM  N + + ED L+      + +  I  + VVD  
Sbjct: 293 KGLLTLNDVVSRGAN--TSLSVADVMHTNLRPVYEDALVQDTTTQILKGRIPNMPVVDRA 350

Query: 324 QKAIGIVH 331
            +  G+V 
Sbjct: 351 GRLTGLVT 358



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 32/66 (48%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      + ++V+++MI  P        L  A+ ++R +++  L V+DD     G++   
Sbjct: 240 RLMQAQTDFITVKEIMITTPLTATLGMSLGKAITIMRDNHVDSLFVIDDDHHLKGLLTLN 299

Query: 334 DLLRFG 339
           D++  G
Sbjct: 300 DVVSRG 305


>gi|238027743|ref|YP_002911974.1| putative transcriptional regulator, XRE family protein
           [Burkholderia glumae BGR1]
 gi|237876937|gb|ACR29270.1| Putative transcriptional regulator, XRE family protein
           [Burkholderia glumae BGR1]
          Length = 156

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L GI+T  +I      +   +  + V  VM
Sbjct: 17  VTPDTPLREAVDAMAEHDIGSL-VVMEYGDLVGILTFREIILRLKANGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-RVLMGVISFYDVAK 121



 Score = 42.6 bits (99), Expect = 0.081,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +GI+ F +++
Sbjct: 16  TVTPDTPLREAVDAMAEHDIGSLVVM-EYGDLVGILTFREII 56


>gi|170738115|ref|YP_001779375.1| CBS domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169820303|gb|ACA94885.1| CBS domain containing membrane protein [Burkholderia cenocepacia
           MC0-3]
          Length = 391

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 45/120 (37%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------NFHKDLNT 282
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R               L  
Sbjct: 259 VAPSTSVAAALTLLDRHRVKALPVVDGEGRLIGIVTRADLTRPPRRPAPLWQRLSARLPQ 318

Query: 283 ------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM +    + E   +T  + L        + VVD   + +GI+   DL+
Sbjct: 319 SFGGQPASVASVMTREVASVPETLPITALVPLFTHSGHHHIPVVDASDRLVGIITQTDLV 378



 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 31/65 (47%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L   D+M K+   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLKCADLMTKHAIEVAPSTSVAAALTLLDRHRVKALPVVDGEGRLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    P+   + + +      + VVD   +L GIIT+ D+    ++    L   
Sbjct: 338 VPETLPITALVPLFTHSGHHHIPVVDASDRLVGIITQTDLVTGLYQQTQMLEAA 391


>gi|75909252|ref|YP_323548.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
 gi|75702977|gb|ABA22653.1| multi-sensor hybrid histidine kinase [Anabaena variabilis ATCC
           29413]
          Length = 1122

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 29/144 (20%)

Query: 221 SDVMHSGDSIPL-VKIGCPLIDAITILSEK--------------------RFGCVAVVDE 259
            ++ H  D  PL +     +IDAI +++++                    +     +V E
Sbjct: 18  HNLYHLIDRHPLTIAPDSYVIDAIRLMNQQGNSPPFISLNSSGTYSNKNSKQTSYVLVVE 77

Query: 260 GQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVI----LEDTLLTVAMQLLRQHN 313
              + GI TE D+ R      DL+ L + +VM +    +      D  +  A+ LL  H 
Sbjct: 78  AGNILGIFTERDLVRLAASKFDLSDLKISEVMTQPVITMKMSNSPD--IFTALSLLNHHQ 135

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
           I  L V++  ++ IG+V    LL+
Sbjct: 136 IRHLPVLNSREQLIGVVSATSLLQ 159


>gi|15897103|ref|NP_341708.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus P2]
 gi|284174344|ref|ZP_06388313.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus 98/2]
 gi|13813282|gb|AAK40498.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase (hpS-1)
           [Sulfolobus solfataricus P2]
 gi|261601765|gb|ACX91368.1| 6-phospho 3-hexuloisomerase [Sulfolobus solfataricus 98/2]
          Length = 209

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 22/198 (11%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK--AIKGRVVITGIGKSGHIGSKLAST 85
           L+++      +     +++ E + +    +E        G+V++ G G+SG +G   A  
Sbjct: 12  LKTMYDIAEFILRAAKAIKPEQTIKMVNELENFYKNNRNGKVLVMGAGRSGLVGRAFAMR 71

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  S+ +            I ++D+++ +S SG +  +      A+     LI+IT
Sbjct: 72  LLHLGFNSYVLGETIVP-----AIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLISIT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALA 190
           S   S +A  +D+V+ +P   +   +              LAP  +          D + 
Sbjct: 127 SYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQILGITEPLAPLGTLFEDTTQIFLDGIV 186

Query: 191 IALLESRNFSENDFYVLH 208
             L+     +E D  ++H
Sbjct: 187 AELMIRLKKTEEDLRLIH 204


>gi|228918684|ref|ZP_04082109.1| hypothetical protein bthur0012_58130 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
 gi|228840985|gb|EEM86202.1| hypothetical protein bthur0012_58130 [Bacillus thuringiensis
           serovar pulsiensis BGSC 4CC1]
          Length = 283

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 2/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L  ++    +     AV  +K  +  + I G+G S  I   +A      G  ++ + 
Sbjct: 106 VQTLHDTVGQLETKSIEKAVGFLKDAE-VIYIYGVGASFLIAEDVAQKWIRLGKQAYAIS 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +   +++ L   +S+SG + ++  ++  A+   +  I+++    S ++  AD
Sbjct: 165 DRHLLAVAMATQSKNALFWGISYSGETSDVIELMKVAKGLELKTISLSRLGTSPISDLAD 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + L   + PE+     A T+S   QL + D +  A  
Sbjct: 225 VSLFTARAPEAK-IRSAATSSRFAQLLVIDVIFFAYS 260


>gi|319651589|ref|ZP_08005716.1| YqzB protein [Bacillus sp. 2_A_57_CT2]
 gi|317396656|gb|EFV77367.1| YqzB protein [Bacillus sp. 2_A_57_CT2]
          Length = 211

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L T  +    V        +V     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGAQLLTENLQKLYVRDYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVVDQSSLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++LN++ V  +M + P   +  +D LL    + L +  I  L V
Sbjct: 122 VGVLSRKDLLRASIGKQELNSIPVNIIMTRMPNITMCEKDDLLIEVAKKLIEKQIDALPV 181

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V   +K     G +   +L + 
Sbjct: 182 VKKTEKGFEVNGRITKTNLTKA 203



 Score = 43.0 bits (100), Expect = 0.072,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++L  L V D     P V+ E+  +  A+  +   ++  L VVD     +G++   DL
Sbjct: 72  LTENLQKLYVRDYQSI-PVVVNENVSVYDAIVTMFLEDVGTLFVVDQSSLLVGVLSRKDL 130

Query: 336 LRFGI 340
           LR  I
Sbjct: 131 LRASI 135


>gi|257075658|ref|ZP_05570019.1| CBS domain-containing protein [Ferroplasma acidarmanus fer1]
          Length = 133

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
                  +     + D    ++E+  G + ++   + +KGI+TE DI +      + T  
Sbjct: 1   MQKHPAYIDGASTIYDGAKKMTEENKGSL-LLGSAESMKGIVTERDIIKAIAGGKSLTAP 59

Query: 285 VEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DV  K N   + ED  +T A  L+ +HNI  L+V  +     G++   DL+R 
Sbjct: 60  VGDVATKENLIFVHEDDSITKAAVLMSKHNIRHLIVKSENGAVTGVLSTRDLMRE 114



 Score = 39.1 bits (90), Expect = 0.90,   Method: Composition-based stats.
 Identities = 9/66 (13%), Positives = 24/66 (36%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                G         + + +++  V     +  A  ++S+     + V  E   + G+++
Sbjct: 48  KAIAGGKSLTAPVGDVATKENLIFVHEDDSITKAAVLMSKHNIRHLIVKSENGAVTGVLS 107

Query: 269 EGDIFR 274
             D+ R
Sbjct: 108 TRDLMR 113


>gi|254283013|ref|ZP_04957981.1| FOG: CBS domain protein [gamma proteobacterium NOR51-B]
 gi|219679216|gb|EED35565.1| FOG: CBS domain protein [gamma proteobacterium NOR51-B]
          Length = 138

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 47/128 (36%), Gaps = 6/128 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    +   +   +   VK    + +A+  +SE +   + V++    L G+++E D  R 
Sbjct: 1   MLKSVNLRDYMLKNPVTVKPTDNVFEAMKKISENKISGLCVIEGDGSLVGVLSEMDCLRA 60

Query: 276 FHKDLNTL----SVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +        V D M   N  +      +    + + + N     VV +  K IG +
Sbjct: 61  VLAAIYNEHNFGPVSDYMTAENLVIAHPGEDIVDVAEDMLRQNKRRRPVV-ENGKLIGQI 119

Query: 331 HFLDLLRF 338
               LL+ 
Sbjct: 120 TIRQLLKA 127


>gi|157375458|ref|YP_001474058.1| nucleotidyltransferase [Shewanella sediminis HAW-EB3]
 gi|157317832|gb|ABV36930.1| nucleotidyltransferase [Shewanella sediminis HAW-EB3]
          Length = 627

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 53/118 (44%), Gaps = 9/118 (7%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE------GQKLKGIITEGDI-FRNFHKDLN 281
              ++ I   + +   I+SE+      + D       G    GIITE D+  +   + L+
Sbjct: 160 EPVMLPITTTIQNVAKIMSEENVSAAIINDPTLADEGGNSFVGIITERDLCAKVIAQGLD 219

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V +VM      +  +  +  AM L+ ++N+  L ++   ++ IG++   D++R+
Sbjct: 220 VDTQVVEVMSTELISLDHNAYIFEAMLLMLRYNVHHLPIL-KNKQPIGLIEVSDIIRY 276


>gi|119505205|ref|ZP_01627280.1| IMP dehydrogenase [marine gamma proteobacterium HTCC2080]
 gi|119458896|gb|EAW39996.1| IMP dehydrogenase [marine gamma proteobacterium HTCC2080]
          Length = 489

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/171 (22%), Positives = 62/171 (36%), Gaps = 13/171 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIAL +         +  V     ++  +    S V+      
Sbjct: 41  NIPLLSAAMDTVTEARLAIALAQDGGVGIIHKNMTVAEQADEVRRVKKYESGVV---KDP 97

Query: 231 PLVKIGCPLIDAITILSE-KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
             ++    + + +  L+       V V+  G  L GI+T  D+   F  DL T  +  +M
Sbjct: 98  ITIQESATINE-LYELTRAYGISGVPVL-RGSDLVGIVTRRDVR--FEIDL-TKPISAIM 152

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   + E        QLL QH I  ++VV+D     G++   D  + 
Sbjct: 153 TPRERLVTVREGAPSDEVQQLLHQHRIEKILVVNDDFDLCGMITVKDFDKA 203


>gi|226942366|ref|YP_002797439.1| transcriptional regulatory protein HexR [Azotobacter vinelandii DJ]
 gi|226717293|gb|ACO76464.1| transcriptional regulatory protein HexR [Azotobacter vinelandii DJ]
          Length = 288

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/179 (19%), Positives = 62/179 (34%), Gaps = 7/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S V  +L+        L  +   L  E       A++ I     R+   G G SG + 
Sbjct: 88  NDSVVDFSLKIFDTTLHTLMEVRERLDPE---ALQHAIDAIAKAP-RIEFYGFGASGAVA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                        +               +   D+ I +S SG S +L       R    
Sbjct: 144 IDAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPGDVAICISQSGRSKDLLITANLVRETGA 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            L+ +    ++ +A  ADI + +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 204 TLVTLCP-GQTPLAELADINVAIDVHEDTEVY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|163855889|ref|YP_001630187.1| RpiR family transcriptional regulator [Bordetella petrii DSM 12804]
 gi|163259617|emb|CAP41918.1| transcriptional regulator, RpiR family [Bordetella petrii]
          Length = 307

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 3/159 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           ++L + L       F  A   ++  +   V    G S  +  +L S L   G        
Sbjct: 123 ATLRAHLPRFSEALFEQAAGIVREARMTYVFGMGGASAVLSQELQSRLVRLGYAVAAYSD 182

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A         +   D+++VLS SG + E+ A     +++   ++ +T +  S +A  AD+
Sbjct: 183 AVLLRMVAATLDERDVVVVLSTSGLTPEILAGTRIVKQYGARIVTLT-DPASPLAGLADV 241

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           VL +        +   P++S    L   D LA  L  +R
Sbjct: 242 VLPIHTAETDFIYK--PSSSRYAMLLAIDILATELALAR 278


>gi|15888834|ref|NP_354515.1| hypothetical protein Atu1509 [Agrobacterium tumefaciens str. C58]
 gi|15156595|gb|AAK87300.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
          Length = 382

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 50/124 (40%), Gaps = 20/124 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTL---- 283
           V     L  A  ++    F  + V ++  ++ GI+T+ D       RN    +  L    
Sbjct: 249 VAPDDSLRHAHALMHNHHFKALPVTNDKAEIVGIVTQTDFLEKASWRNGRPSIGFLQRLR 308

Query: 284 -----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      +V+D+M    K +L +T +  A+    +  +  L V+D   K +GIV  
Sbjct: 309 LILSGASAPNDTVKDIMTSPVKTVLPETSIEEAIIRFAEEGLHYLPVIDAKGKMVGIVSQ 368

Query: 333 LDLL 336
            D++
Sbjct: 369 SDVM 372



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 28/64 (43%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R++ +    L    VM ++   +  D  L  A  L+  H+   L V +D  + +GIV  
Sbjct: 226 LRSYRRRALHLDCASVMSRDVIGVAPDDSLRHAHALMHNHHFKALPVTNDKAEIVGIVTQ 285

Query: 333 LDLL 336
            D L
Sbjct: 286 TDFL 289



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 23/54 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V     + +AI   +E+    + V+D   K+ GI+++ D+      D
Sbjct: 325 MTSPVKTVLPETSIEEAIIRFAEEGLHYLPVIDAKGKMVGIVSQSDVMVAMLAD 378


>gi|332982740|ref|YP_004464181.1| glycine betaine/L-proline ABC transporter ATPase [Mahella
           australiensis 50-1 BON]
 gi|332700418|gb|AEE97359.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Mahella
           australiensis 50-1 BON]
          Length = 372

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/97 (21%), Positives = 46/97 (47%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               L  A+ I+S      + +VD+  KL GI+T   +  N +K      +E++  ++  
Sbjct: 263 PNRTLTQALEIMSSSSVDSLIIVDDKNKLLGIVTAKQVRNNANK---ARRLEEIYERDIL 319

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  D  +   ++L+ Q++I  + V D+  +  G++ 
Sbjct: 320 SVKLDDSMADILKLMAQNDIGYVPVTDEQGRLRGLIT 356



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/48 (35%), Positives = 28/48 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             ED+MI NP     +  LT A++++   ++  L++VDD  K +GIV 
Sbjct: 249 KAEDIMITNPVKATPNRTLTQALEIMSSSSVDSLIIVDDKNKLLGIVT 296



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 12/36 (33%), Positives = 22/36 (61%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           VK+   + D + ++++   G V V DE  +L+G+IT
Sbjct: 321 VKLDDSMADILKLMAQNDIGYVPVTDEQGRLRGLIT 356


>gi|306831967|ref|ZP_07465122.1| CBS domain protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
 gi|304425893|gb|EFM29010.1| CBS domain protein [Streptococcus gallolyticus subsp. gallolyticus
           TX20005]
          Length = 224

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  ++ E+    + V+ E  KL GI+TE  +                +  L
Sbjct: 19  VSPDTTVAHAADMMREQGLRRLPVI-ENDKLVGIVTERTMAEASPSKATTLSIYEMNYLL 77

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + DVMI++   +     L  A+  + ++ + ++ VV +  +  G++   D+ + 
Sbjct: 78  NKTKIRDVMIRDVVTVSPYASLEDAIYTMMKNRVGIVPVV-ESGQVYGVITDKDVFKA 134



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  DT +  A  ++R+  +  L V+++  K +GIV 
Sbjct: 6   MAVKDFMTKKVVYVSPDTTVAHAADMMREQGLRRLPVIEND-KLVGIVT 53



 Score = 43.0 bits (100), Expect = 0.067,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI  + + R G V VV E  ++ G+IT+ D+F+ F
Sbjct: 86  MIRDVVTVSPYASLEDAIYTMMKNRVGIVPVV-ESGQVYGVITDKDVFKAF 135


>gi|194291874|ref|YP_002007781.1| transcriptional regulator RpiR family, phosphosugar-binding domain
           [Cupriavidus taiwanensis LMG 19424]
 gi|193225778|emb|CAQ71724.1| putative transcriptional regulator, RpiR family,
           phosphosugar-binding domain [Cupriavidus taiwanensis LMG
           19424]
          Length = 301

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 60/159 (37%), Gaps = 3/159 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
                 L++LE++     + +   A   +   +        G S  +  +    LA  G 
Sbjct: 103 SIHADILTALEANRGLLDTERIERAARLLLGARMVYAFGMGGGSSFLADETRHRLARLGL 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P      A         + RDD+++  S SG   E+ A    AR +   L+A+T+   S 
Sbjct: 163 PVASYQDALLQKMVAATLGRDDVVLAFSASGRVPEMLASCDIAREYGARLVAVTA-LGSP 221

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +A  AD++L  P           P+ S    L + D LA
Sbjct: 222 LAARADVLL--PVRTLETDFIFKPSASRYAMLMVLDVLA 258


>gi|227828247|ref|YP_002830027.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.14.25]
 gi|227831005|ref|YP_002832785.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus L.S.2.15]
 gi|229579885|ref|YP_002838284.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.G.57.14]
 gi|229581456|ref|YP_002839855.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.N.15.51]
 gi|229585475|ref|YP_002843977.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.27]
 gi|238620439|ref|YP_002915265.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.4]
 gi|227457453|gb|ACP36140.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus L.S.2.15]
 gi|227460043|gb|ACP38729.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.14.25]
 gi|228010600|gb|ACP46362.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.G.57.14]
 gi|228012172|gb|ACP47933.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus Y.N.15.51]
 gi|228020525|gb|ACP55932.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.27]
 gi|238381509|gb|ACR42597.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus M.16.4]
 gi|323475314|gb|ADX85920.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus REY15A]
 gi|323478040|gb|ADX83278.1| 6-phospho 3-hexuloisomerase [Sulfolobus islandicus HVE10/4]
          Length = 209

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 38/198 (19%), Positives = 78/198 (39%), Gaps = 22/198 (11%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK--AIKGRVVITGIGKSGHIGSKLAST 85
           L+++      +     +++ E + +    +E        G+V++ G G+SG +G   A  
Sbjct: 12  LKTMYDIAEFILRAAKAIKPEQTSKMISELENFYKNNRNGKVLVMGAGRSGLVGRAFAMR 71

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L   G  S+ +            I ++D+++ +S SG +  +      A+     LI+IT
Sbjct: 72  LLHLGFNSYVLGETIVP-----AIGKNDIVVAISGSGRTKLILTAAEAAKEAGAKLISIT 126

Query: 146 SENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALA 190
           S   S +A  +D+V+ +P   +   +              LAP  +          D + 
Sbjct: 127 SYFDSPLAKISDVVIEIPGRTKYSKNEDYFARQILGITEPLAPLGTLFEDTTQIFLDGIV 186

Query: 191 IALLESRNFSENDFYVLH 208
             L+     +E D  ++H
Sbjct: 187 AELMIRLKKTEEDLRLVH 204


>gi|330950771|gb|EGH51031.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae Cit 7]
          Length = 489

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDGNFALKGMMTVKDIEKAK 204


>gi|327482144|gb|AEA85454.1| DNA-binding transcriptional regulator HexR [Pseudomonas stutzeri
           DSM 4166]
          Length = 289

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 73/169 (43%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         AV+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQSLDPQLVSRAVDLMIQAR-QIHFFGLGASASVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR+    ++ +T+   
Sbjct: 158 NLAVTAHSDVLMQRMLASVAHTGELFVIISYTGRTRELVEVARIARQNGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTLSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|224476794|ref|YP_002634400.1| hypothetical protein Sca_1310 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421401|emb|CAL28215.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 431

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++       + K    + D      +       VVD+  KL GI+T 
Sbjct: 180 NQIIRKEILIVEDIVKPVSEETVAKEDMLVSDLKKRSQQTGHSRFPVVDDDWKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI     KD +  S++ VM K    +   T +     ++    I +L V    +K +G+
Sbjct: 240 KDI---IAKD-SDESIQKVMTKPVLNVQNSTTVASCAHMMIWEGIELLPVTTINKKLLGV 295

Query: 330 VHFLDLLRF 338
           V   D+LR 
Sbjct: 296 VSREDVLRA 304


>gi|182414884|ref|YP_001819950.1| chloride channel core [Opitutus terrae PB90-1]
 gi|177842098|gb|ACB76350.1| Chloride channel core [Opitutus terrae PB90-1]
          Length = 590

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 9/123 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSE-----KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
              + PLV     + +    L++      R     +     KL GIIT GD+ R   +D 
Sbjct: 443 MDRTPPLVAADTTVAELAEQLAQPDSPLARRQATLIT-RDGKLAGIITRGDLIRAQQRDD 501

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLLR 337
           + T++V+      P  +  D  L  A+  + Q  I  L VV  +D Q  +G +   ++L 
Sbjct: 502 DGTMTVDQAGTTEPVTVFPDDTLDHALVRMLQRGIGRLPVVSREDGQTIVGYLGRAEILA 561

Query: 338 FGI 340
             +
Sbjct: 562 ARL 564


>gi|328952887|ref|YP_004370221.1| 6-phospho-3-hexuloisomerase [Desulfobacca acetoxidans DSM 11109]
 gi|328453211|gb|AEB09040.1| 6-phospho-3-hexuloisomerase [Desulfobacca acetoxidans DSM 11109]
          Length = 204

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 64/197 (32%), Gaps = 19/197 (9%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           ++   +  A+  I+ E R    +   +    +  F   +E       R+   G G+SG +
Sbjct: 16  LEERNIAWAVDQIVEETR---RVLERISPSEAEAFIQELE----TANRIFFFGAGRSGFV 68

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                  L   G   F+V            I   DL+ V+S SG +     ++  A +  
Sbjct: 69  LRTFCMRLMQLGFNVFYVGETITP-----RIQPGDLLTVISGSGETGHTCGLVKQAHQRQ 123

Query: 139 IPLIAITSENKSVVACHADIVLTLP------KEPESCPHGLAPTTSAIMQLAIGDALAIA 192
              +AIT+   S     AD+ + +P         E   H    +          +A+ + 
Sbjct: 124 ARTVAITAHRNSTAGQVADVAVVIPGATKLVLAQEEDSHQCPGSLFEQAAFLFLEAVVML 183

Query: 193 LLESR-NFSENDFYVLH 208
           L   +           H
Sbjct: 184 LFHLKLGRDREKMLARH 200


>gi|315443999|ref|YP_004076878.1| signal-transduction protein containing cAMP-binding and CBS domains
           [Mycobacterium sp. Spyr1]
 gi|315262302|gb|ADT99043.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Mycobacterium sp. Spyr1]
          Length = 615

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/109 (19%), Positives = 44/109 (40%), Gaps = 3/109 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVM 289
           LV    P+ D +  +++       +     +L GI T+ D+  R     L   ++V+ VM
Sbjct: 165 LVAPDDPVRDVVVQMTDHHVSYALIRLPDGRL-GIFTDRDLRIRVVAAGLPVDVAVDRVM 223

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + +  D      +  + +  +  + V+    + IG++   DLL  
Sbjct: 224 SAPARTVTADMTADSVLMEMLECGLRHMPVLTPRGEVIGVLEDADLLAA 272


>gi|223043584|ref|ZP_03613629.1| thioesterase family protein [Staphylococcus capitis SK14]
 gi|222443072|gb|EEE49172.1| thioesterase family protein [Staphylococcus capitis SK14]
          Length = 433

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
             K+    +   D++   + + ++     + D   + ++       +V+E  KL GI+T 
Sbjct: 181 NQKIRKEILVVEDIVKPINELSVLFDYMKINDYKKLANDTGHTRFPIVNEDFKLVGIVTS 240

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            +I     +D     +  +M +NP  +     +     ++    I +L V ++ +KAIG+
Sbjct: 241 REIINMNEED----ELGKIMTRNPLSVKLTNTVASCAHMMIWEGIELLPVTNNNKKAIGV 296

Query: 330 VHFLDLLR 337
           ++  D+L+
Sbjct: 297 INRQDVLK 304


>gi|222151619|ref|YP_002560775.1| hypothetical protein MCCL_1372 [Macrococcus caseolyticus JCSC5402]
 gi|222120744|dbj|BAH18079.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 433

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/128 (20%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    + A D++   +    ++    + +   +    +     V+D+  KL GI+T  
Sbjct: 181 QLIKKEVLTAQDILIKIEDTIYLRENDTVSEWNHLSESSKHTRFPVLDDNNKLSGIVTSK 240

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     K+ N   ++ VM KNP  +  ++ +     ++   +I +L VV      +GIV
Sbjct: 241 DV---LGKNPNE-KIKKVMTKNPVSVNLNSTVASCAHIMIWESIELLPVVSRYNNLLGIV 296

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 297 SREDVLKA 304


>gi|296101808|ref|YP_003611954.1| DNA-binding transcriptional regulator HexR [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
 gi|295056267|gb|ADF61005.1| DNA-binding transcriptional regulator HexR [Enterobacter cloacae
           subsp. cloacae ATCC 13047]
          Length = 302

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V     +   +    L  +  SL        + AV+ 
Sbjct: 81  LHLAQSLANGTPYVNRNVDEDDSVDAYTAKIFESAMATLDHVRQSLDMS---SVNRAVDL 137

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K R+   G+G S  +     +       P  +              + DD+++++S
Sbjct: 138 LTQAK-RIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSEDDVVVLIS 196

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +     +   AR     +IA+T+   + +A  A + +TL    ++  +   P  S 
Sbjct: 197 HTGRTKSQVELAQLARENDAMVIALTT-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 253

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 254 LAQLTVIDVLATGFTLRRGAKFRD 277


>gi|242075040|ref|XP_002447456.1| hypothetical protein SORBIDRAFT_06g001350 [Sorghum bicolor]
 gi|241938639|gb|EES11784.1| hypothetical protein SORBIDRAFT_06g001350 [Sorghum bicolor]
          Length = 180

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 47/112 (41%), Gaps = 2/112 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               + +   G  L +     + +++  + VVD+  +  G+I+  D  +    +    +V
Sbjct: 63  MSRPVQVATPGQRLAEVDAFFAARQYSGLPVVDDDGRCIGVISNKD--KAKAPNGMESTV 120

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM      +     +  A  L+ +  +  + VV++ Q  IGIV   D+ +
Sbjct: 121 GEVMSSPAITLTLYKTVLEAAALMLKEKVHRIPVVNEQQHVIGIVTRSDVFQ 172



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 33/104 (31%), Gaps = 15/104 (14%)

Query: 250 RFGCVAVV--------DEGQKLKGIITEGDIFRNFHKDLNT-------LSVEDVMIKNPK 294
           R G   VV        D       II + D+       + T         + DVM +  +
Sbjct: 9   RRGAALVVVVPSAALDDVDVPPAAIIDDADLRAYLESQIVTSDQMSPAAKLTDVMSRPVQ 68

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V      L            S L VVDD  + IG++   D  + 
Sbjct: 69  VATPGQRLAEVDAFFAARQYSGLPVVDDDGRCIGVISNKDKAKA 112


>gi|148827284|ref|YP_001292037.1| hypothetical protein CGSHiGG_03305 [Haemophilus influenzae PittGG]
 gi|148718526|gb|ABQ99653.1| hypothetical protein CGSHiGG_03305 [Haemophilus influenzae PittGG]
          Length = 288

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQAAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|39934295|ref|NP_946571.1| CBS domain-containing protein [Rhodopseudomonas palustris CGA009]
 gi|192289823|ref|YP_001990428.1| signal-transduction protein with CBS domains [Rhodopseudomonas
           palustris TIE-1]
 gi|39648143|emb|CAE26663.1| CBS domain [Rhodopseudomonas palustris CGA009]
 gi|192283572|gb|ACE99952.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris TIE-1]
          Length = 338

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 48/139 (34%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
              +I  V+   P+      L +     V VVD      GI++EGD+      D      
Sbjct: 7   MTTAIVTVQPETPVHAIAETLLKHGISAVPVVDGAGVPLGIVSEGDLMPRADSDREARHD 66

Query: 281 ----------------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                                 +T + +DVM+     + E T L     LL +  I  + 
Sbjct: 67  WWLQMLSEGEAVHPDYVRFLKSDTRTAKDVMVGPVVTVEETTALADIADLLVEKRIKRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV      +GIV   DLL+
Sbjct: 127 VV-RAGHIVGIVSRADLLK 144



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM      +  +T +    + L +H IS + VVD     +GIV   DL+
Sbjct: 1   MKAADVMTTAIVTVQPETPVHAIAETLLKHGISAVPVVDGAGVPLGIVSEGDLM 54


>gi|289623007|gb|ADD13488.1| transcriptional regulator [Lactobacillus casei]
          Length = 230

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 48/130 (36%), Gaps = 1/130 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 54  IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAS 112

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D +I+ S SG   +  A+   A++  +PLI IT    S +A  AD
Sbjct: 113 DYHMQLMAATHLGPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLAKMAD 172

Query: 158 IVLTLPKEPE 167
                  E  
Sbjct: 173 AAFVAVAEES 182


>gi|284161812|ref|YP_003400435.1| sugar isomerase (SIS) [Archaeoglobus profundus DSM 5631]
 gi|284011809|gb|ADB57762.1| sugar isomerase (SIS) [Archaeoglobus profundus DSM 5631]
          Length = 206

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 61/143 (42%), Gaps = 11/143 (7%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
              +++ I     L  L   L+ +   + +  V+ +K  K  + + G+G+SG +    A 
Sbjct: 5   DIVVKNAIKIVDFLKVLPKVLEDQ-KERLNEFVKILKDSKA-IHVYGVGRSGAVALCFAI 62

Query: 85  TLAS----TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            L       G   ++V            I   D +I  S SG + E+  +   A+  +  
Sbjct: 63  RLKHFEKVLGCKVWWVGDEVREK-----IEEGDTLIAFSGSGETAEVLIVAERAKNANAK 117

Query: 141 LIAITSENKSVVACHADIVLTLP 163
           ++A+TS   S +A  AD+V+ +P
Sbjct: 118 VVAVTSFEDSSLARMADLVIIIP 140


>gi|315303155|ref|ZP_07873826.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria ivanovii FSL F6-596]
 gi|313628486|gb|EFR96948.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria ivanovii FSL F6-596]
          Length = 397

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD   + +GIV 
Sbjct: 312 VDILEKNVFYVHEDTLLRDTVQRILKRGYKYIPVVDKENRLVGIVT 357



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|298292658|ref|YP_003694597.1| hypothetical protein Snov_2689 [Starkeya novella DSM 506]
 gi|296929169|gb|ADH89978.1| CBS domain containing membrane protein [Starkeya novella DSM 506]
          Length = 152

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 8/118 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDIFRNFHKD-- 279
               +P +++   +  A T+L+ +R G V V D    EG  + GI +E D+ R   +   
Sbjct: 10  KNARVPTIRMSETVEMAATLLNRERIGAVVVKDACGSEGDTVVGIFSERDVVRAVAERGA 69

Query: 280 -LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               L+V D+M +N      D  +     L+ QH++  L V+ +  + +G++   D+L
Sbjct: 70  LALRLTVGDLMSRNMISCTMDDSVDHVRALMDQHHVRHLPVL-EDHQLVGVLSIRDVL 126


>gi|297566684|ref|YP_003685656.1| magnesium transporter [Meiothermus silvanus DSM 9946]
 gi|296851133|gb|ADH64148.1| magnesium transporter [Meiothermus silvanus DSM 9946]
          Length = 453

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 4/81 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           VVD   +L+G+++  D+     K      V ++M  +   +  DT      +L+  +N +
Sbjct: 177 VVDAANRLEGVVSLRDLIVADPK----TKVREIMNPDVVRVRTDTDQEEVARLMADYNFT 232

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
           VL VVD+     GI+   D++
Sbjct: 233 VLPVVDEEGVLSGIITIDDVV 253



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 21/47 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               +  V+      +   ++++  F  + VVDE   L GIIT  D+
Sbjct: 206 MNPDVVRVRTDTDQEEVARLMADYNFTVLPVVDEEGVLSGIITIDDV 252


>gi|163815820|ref|ZP_02207191.1| hypothetical protein COPEUT_02000 [Coprococcus eutactus ATCC 27759]
 gi|158448961|gb|EDP25956.1| hypothetical protein COPEUT_02000 [Coprococcus eutactus ATCC 27759]
          Length = 281

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 30/175 (17%), Positives = 60/175 (34%), Gaps = 3/175 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  L  ++    S +    ++ I      V++  +G +  +    A  L   G  +    
Sbjct: 106 MEELRQTVAMMDSEELKKILDVINNADT-VLMAAVGNTIPVAMDGAYKLNQIGIRAMSTP 164

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             E   G    +T  D+++ +S SG S  +  IL  A+      I+IT+  +S VA  + 
Sbjct: 165 IWETELGYSYNLTDKDVVVAISNSGESTGVIQILEAAKSRGAVAISITNNARSSVAELST 224

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
             +T     +    G   +  +   +     + + L   R  S            
Sbjct: 225 YHITTATREKLFLDGYCFSRVSATMVIE--IIYLLLASMRKESYESIVRHEQAMA 277


>gi|159039472|ref|YP_001538725.1| signal-transduction protein [Salinispora arenicola CNS-205]
 gi|157918307|gb|ABV99734.1| putative signal-transduction protein with CBS domains [Salinispora
           arenicola CNS-205]
          Length = 138

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKN 292
              LI A   + +   G V V D G  + GI+T+ DI  R   +++N  +  +  +  ++
Sbjct: 18  NDTLIAAAQEMRDCAIGDVVVTD-GDSVVGIVTDRDITVRAVAENMNPASTRLNQITSRD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +      A  L+R + +  L VV +  + IG+V   DL
Sbjct: 77  VVTVSQYDDAVAAADLMRTYAVRRLPVV-EDGQLIGLVSMGDL 118



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V + M      +  +  L  A Q +R   I  ++V D     +GIV   D+ 
Sbjct: 2   TTVGEFMTTRLVTMDGNDTLIAAAQEMRDCAIGDVVVTDGD-SVVGIVTDRDIT 54


>gi|90408665|ref|ZP_01216817.1| DNA polymerase I [Psychromonas sp. CNPT3]
 gi|90310241|gb|EAS38374.1| DNA polymerase I [Psychromonas sp. CNPT3]
          Length = 573

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/268 (14%), Positives = 89/268 (33%), Gaps = 26/268 (9%)

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
            +I   +  +    G     ++  E    +L MI    + I         EL   L   +
Sbjct: 27  SYIAKNIEISYYRMG---SMINTVEDPSKELYMIRSGVVEIHRRKG----ELYNRLDQGK 79

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
            F   +  +T+     +A      L                 S    + + D++   L +
Sbjct: 80  LFG-QVGLLTNNKVRFLAKSVKDTLLYCIPEAIFHDLYDRYESFADFVEVEDSM--RLKQ 136

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVA 255
           +     +D            +      ++       ++     +      +S++    V 
Sbjct: 137 AVESKSDD--------ANALMSSKVKTLL--TREALMLPNTSSMQSVAQFMSQENVSAVL 186

Query: 256 VVD---EGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
           + D   +     GIITE D+  +     L+    V+ +M      +  +  +  AM L+ 
Sbjct: 187 INDPSVDDNNFVGIITEHDLCVKVIAGGLDVNDPVDTIMSTKLISLDHNAYIFEAMLLML 246

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +HN+  L ++   +  IG++   D++R+
Sbjct: 247 RHNVHHLPIL-KNKYPIGLIEVADIIRY 273


>gi|323452978|gb|EGB08851.1| hypothetical protein AURANDRAFT_63764 [Aureococcus anophagefferens]
          Length = 1727

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 1/113 (0%)

Query: 226  SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                +  +     + DA   +       + VVD    L+G +   D+ R   K      V
Sbjct: 941  MTKDVVTISANATVADAHGTMKASGLKSLPVVDGNDDLRGTLKLNDVIRAEKKGNAAQKV 1000

Query: 286  EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +M      +  +T +     +L    +  + V+ D  + +GIV   DLLR 
Sbjct: 1001 RGIMRTQVASVGPETTVGELETILVTT-VGRVPVITDSGRLLGIVTRTDLLRL 1052



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 13/66 (19%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 275 NFHKDL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +D+    L+ + +M K+   I  +  +  A   ++   +  L VVD      G +  
Sbjct: 925 ALARDMVPPELTAQVIMTKDVVTISANATVADAHGTMKASGLKSLPVVDGNDDLRGTLKL 984

Query: 333 LDLLRF 338
            D++R 
Sbjct: 985 NDVIRA 990


>gi|332360189|gb|EGJ38003.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1056]
          Length = 279

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 31/182 (17%), Positives = 61/182 (33%), Gaps = 4/182 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLKRVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSFWENQKLNGYYR 277

Query: 219 CA 220
             
Sbjct: 278 RR 279


>gi|332158509|ref|YP_004423788.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus sp.
           NA2]
 gi|331033972|gb|AEC51784.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus sp.
           NA2]
          Length = 406

 Score = 69.2 bits (168), Expect = 9e-10,   Method: Composition-based stats.
 Identities = 40/214 (18%), Positives = 76/214 (35%), Gaps = 24/214 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VTRK   L  +  ++   +++      +  +   L+     +    V+ +     ++ I
Sbjct: 198 EVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLK---LEEVRGLVDAMIGA-NKIFI 253

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G+SG +G   A  L       + V                DL+I +S SG +  +  
Sbjct: 254 YGAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEEGDLLIAISGSGETKTIVD 308

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPT 176
               A++    ++AITS   S +   ADIV+ +P   ++                  AP 
Sbjct: 309 AAEIAKQQGGKVVAITSYRNSTLGKLADIVVEIPGRTKTDVPTDYIARQMLTKYKWTAPM 368

Query: 177 TSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +      +   D +   L+ +   +E D    H
Sbjct: 369 GTLFEDSTMVFLDGVIALLMATFQKTEKDMRRKH 402


>gi|255100012|ref|ZP_05328989.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-63q42]
 gi|255305899|ref|ZP_05350071.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile ATCC 43255]
          Length = 378

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMI 290
           V     +   I I+   +   + ++D  + LKGI+T  D+     KD++  S+   D+M 
Sbjct: 262 VNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM-----KDIDDKSILLADIMS 316

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             P  + E   L   + ++ ++++  + V+ D  K +G++    LL
Sbjct: 317 SEPLHVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLL 362



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+MIKNP  +     +T  ++++R   +  L+++D  +   GIV   D+
Sbjct: 250 KARDIMIKNPIAVNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM 301



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            V  G  L++ + +++    G + V+ +  KL G+IT   +     +    + V 
Sbjct: 321 HVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLLSVLSEQFLEMEVS 375


>gi|120404861|ref|YP_954690.1| signal-transduction protein [Mycobacterium vanbaalenii PYR-1]
 gi|119957679|gb|ABM14684.1| putative signal-transduction protein with CBS domains
           [Mycobacterium vanbaalenii PYR-1]
          Length = 142

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KD 279
           + + G ++  +     +   +T LS    G + VV     L GI++E D+ R  H    D
Sbjct: 7   LRNKGATVATITPETSVAGLLTELSVHNIGAMVVVSPDG-LLGIVSERDVVRKLHDMGAD 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V ++M         D  +     L+  + +  + VV    +  GIV   D+++
Sbjct: 66  LLRRPVSEIMSTLVATCTPDDTVDSLSALMTNNRVRHVPVV-VDGRLAGIVSIGDVVK 122


>gi|238796304|ref|ZP_04639813.1| Hex regulon repressor [Yersinia mollaretii ATCC 43969]
 gi|238719749|gb|EEQ11556.1| Hex regulon repressor [Yersinia mollaretii ATCC 43969]
          Length = 301

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/166 (20%), Positives = 65/166 (39%), Gaps = 4/166 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+ +         + AV+ +   K ++   G+G S  +     +       P  +  
Sbjct: 115 MASLDMAKNNLDIAAINRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFD 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  + + AR     +IAITS   + +A  A 
Sbjct: 174 DIVMQRMSCMNSSEGDVVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLANEAT 232

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + L L    ++  +   P  S I QL + D LA      R     D
Sbjct: 233 LPLLLDVPEDTDMY--MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 276


>gi|126698477|ref|YP_001087374.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Clostridium difficile 630]
 gi|254974525|ref|ZP_05270997.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-66c26]
 gi|255091913|ref|ZP_05321391.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile CIP 107932]
 gi|255313648|ref|ZP_05355231.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-76w55]
 gi|255516332|ref|ZP_05384008.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-97b34]
 gi|255649432|ref|ZP_05396334.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-37x79]
 gi|260682598|ref|YP_003213883.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Clostridium difficile CD196]
 gi|260686198|ref|YP_003217331.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Clostridium difficile R20291]
 gi|306519511|ref|ZP_07405858.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-32g58]
 gi|115249914|emb|CAJ67733.1| ABC-type transport system, glycine betaine/carnitine/choline
           ATP-binding protein [Clostridium difficile]
 gi|260208761|emb|CBA61622.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile CD196]
 gi|260212214|emb|CBE02911.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile R20291]
          Length = 378

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMI 290
           V     +   I I+   +   + ++D  + LKGI+T  D+     KD++  S+   D+M 
Sbjct: 262 VNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM-----KDIDDKSILLADIMS 316

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             P  + E   L   + ++ ++++  + V+ D  K +G++    LL
Sbjct: 317 SEPLHVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLL 362



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+MIKNP  +     +T  ++++R   +  L+++D  +   GIV   D+
Sbjct: 250 KARDIMIKNPIAVNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM 301



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            V  G  L++ + +++    G + V+ +  KL G+IT   +     +    + V 
Sbjct: 321 HVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLLSVLSEQFLEMEVS 375


>gi|90424619|ref|YP_532989.1| signal-transduction protein [Rhodopseudomonas palustris BisB18]
 gi|90106633|gb|ABD88670.1| putative signal-transduction protein with CBS domains
           [Rhodopseudomonas palustris BisB18]
          Length = 142

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 53/108 (49%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+   PL  AI +L+++R G V V+   ++++GI++E D+ R   +    +    V  VM
Sbjct: 17  VEPETPLFAAIKVLADRRIGAVLVL-TRKRIEGILSERDVVRVLGERGAAVLEEPVSAVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +          +   M+L+       + V++D +  +G++   D+++
Sbjct: 76  TRKVIHCRPSDTVASMMELMTSGKFRHIPVIEDAE-IVGLISIGDIVK 122


>gi|109897294|ref|YP_660549.1| DNA-binding transcriptional regulator HexR [Pseudoalteromonas
           atlantica T6c]
 gi|332307790|ref|YP_004435641.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
 gi|109699575|gb|ABG39495.1| transcriptional regulator, RpiR family [Pseudoalteromonas atlantica
           T6c]
 gi|332175119|gb|AEE24373.1| transcriptional regulator, RpiR family [Glaciecola agarilytica
           4H-3-7+YE-5]
          Length = 284

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SLE + Q       +  V+ +   + ++   G+G S  +     +       P  +  
Sbjct: 103 MASLEVARQSVDINTINRVVDLLTQAQ-KISFFGLGASASVAHDALNKFFRFNVPVVYFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       + DD+++++S +G +  L  +   AR     ++ ITS   S +A   +
Sbjct: 162 DILMQRMSCMNSSEDDVVVLISHTGRTKSLVEVAQIARSNDATVVGITS-QNSPLAKECN 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +VL+L    ++  +   P  S I QL + D LA      R 
Sbjct: 221 LVLSLEVPEDTDMY--MPMASRIAQLTLIDILATGFTLRRG 259


>gi|325294588|ref|YP_004281102.1| polynucleotide adenylyltransferase region [Desulfurobacterium
           thermolithotrophum DSM 11699]
 gi|325065036|gb|ADY73043.1| Polynucleotide adenylyltransferase region [Desulfurobacterium
           thermolithotrophum DSM 11699]
          Length = 881

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 48/111 (43%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +V     + +A T L +       VVD+ + + GI+    I +  +  L    +
Sbjct: 315 MTYPPIVVSFDSSIEEARTTLMKNSINAAPVVDKKRNIVGIVNRTLIDKAIYMGLKEEPI 374

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++M ++   +L +T +    +++   + S + VV    K IG++   D+L
Sbjct: 375 FEIMERDFLQVLPETPIGDVEKVIIDRHQSFVPVV-QDGKPIGVITRTDIL 424



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 26/49 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +D+M   P V+  D+ +  A   L +++I+   VVD  +  +GIV+
Sbjct: 309 KKAKDIMTYPPIVVSFDSSIEEARTTLMKNSINAAPVVDKKRNIVGIVN 357



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            V    P+ D   ++ ++    V VV +  K  G+IT  DI  N +KD
Sbjct: 384 QVLPETPIGDVEKVIIDRHQSFVPVV-QDGKPIGVITRTDILMNLYKD 430


>gi|270290668|ref|ZP_06196892.1| glutamine-fructose-6-phosphate transaminase [Pediococcus
           acidilactici 7_4]
 gi|270280728|gb|EFA26562.1| glutamine-fructose-6-phosphate transaminase [Pediococcus
           acidilactici 7_4]
          Length = 605

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 116/290 (40%), Gaps = 47/290 (16%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHA 98
           E  L  + + +F  A+       G++ I G G S   G +G KL    A    P+  V A
Sbjct: 270 EKYLDSKGAVRFDKAMLDKLNQAGKIYIVGAGTSYHAGLVGKKLLERFAK--VPTEVVLA 327

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKA-ILYYARRFSIPLIAITSENKSVVACHAD 157
           +E ++ D  +I +D   I LS SG + + +  ++     +  P + IT+   S +A  A+
Sbjct: 328 SEFAYDD-PIIEKDAFFIFLSQSGETADSRQVLVRVNDEWQKPSLTITNVANSTLAREAE 386

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN-DFYVLHPGGKLGTL 216
              TL   PE     +A T +   Q+A+   LA+A+   +  +   DF +      +   
Sbjct: 387 FSATLEAGPEIA---VASTKAYTAQIAVEALLAVAMGRMKQINAATDFDIAGQLSMVANA 443

Query: 217 FVCASDVMHSGDSIPL-------------------VKIGCPLIDAITILS---------- 247
                D   + + +                     V +   L   +  +S          
Sbjct: 444 IQTVVDEKAAIEQLAKDTLLKARNTFYIGRGLDYAVALEASLK--LKEISYIQAEGFAAG 501

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           E + G +A+++EG  + GIIT+G        D    ++E+V+ +  +VI 
Sbjct: 502 ELKHGTIALIEEGTPVIGIITQGK-----TADHTRSNLEEVISRGAQVIT 546


>gi|237800058|ref|ZP_04588519.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806387|ref|ZP_04593091.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331022913|gb|EGI02970.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027500|gb|EGI07555.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 489

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|305666499|ref|YP_003862786.1| CBS domain-containing protein [Maribacter sp. HTCC2170]
 gi|88708766|gb|EAR01001.1| CBS domain protein [Maribacter sp. HTCC2170]
          Length = 155

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/141 (18%), Positives = 52/141 (36%), Gaps = 8/141 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F       + G           +   I   K    + + I  L   +     VV++  +L
Sbjct: 6   FQGARKHQQAGEEIPLKVSDYMTTKLITF-KPDQSVEEVIDSLINNKISGGPVVNDKNEL 64

Query: 264 KGIITEGDIFRNF------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            GII+EGD  ++       +  ++   +E+ M+KN + I  +  +  A            
Sbjct: 65  VGIISEGDCIKHISDSRYYNMPMDDDRIENRMVKNVETIDGNMNIFDAANKFLNEKRRRF 124

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            +V +  K +G +   D+L+ 
Sbjct: 125 PIV-EAGKLVGQISQKDILKA 144


>gi|261196978|ref|XP_002624892.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces dermatitidis
           SLH14081]
 gi|239596137|gb|EEQ78718.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces dermatitidis
           SLH14081]
 gi|239609723|gb|EEQ86710.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces dermatitidis
           ER-3]
 gi|327355385|gb|EGE84242.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces dermatitidis
           ATCC 18188]
          Length = 549

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
            AP  S+ M      ++AI +            V+H              V         
Sbjct: 87  KAPLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSADDQANMVRKVKRYENGFIL 141

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
              ++     + +A  +  +  FG   V + G    KL G+IT  DI  +    +    V
Sbjct: 142 EPVVISPTTTVAEAKALKEKWGFGGFPVTENGTLLSKLVGMITSRDIQFH---PVGDDPV 198

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VM  +       T L  A ++LR      L +VD     + ++   DL++
Sbjct: 199 TAVMTTDLVTAPSGTTLAEANEVLRSSKKGKLPIVDSEGNLVSLLSRSDLMK 250


>gi|227555133|ref|ZP_03985180.1| transcriptional regulator [Enterococcus faecalis HH22]
 gi|227175717|gb|EEI56689.1| transcriptional regulator [Enterococcus faecalis HH22]
          Length = 228

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 51/120 (42%), Gaps = 5/120 (4%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDL 280
            V        +V     + DAIT L     G + V+DE ++L G ++  D+ R   + ++
Sbjct: 95  KVQEIMSPPLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGGLSRKDLLRASLNTNI 154

Query: 281 NTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLL 336
           +   V   M + P  K    +  +  A   L+++ +  L VV+     K IG +    +L
Sbjct: 155 DGTPVAVCMTRVPHVKTCTPEFTILEAADTLQKYEVDSLPVVEKENPKKVIGKITKTKIL 214



 Score = 43.7 bits (102), Expect = 0.045,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D+    V+++M   P ++ +DT +  A+  L  +++  L V+D+ ++ +G +   DLLR 
Sbjct: 90  DVFQTKVQEIMSP-PLMVAQDTSIRDAITNLFMYDVGSLYVMDEAKELLGGLSRKDLLRA 148


>gi|28868656|ref|NP_791275.1| inosine-5-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213971503|ref|ZP_03399614.1| inosine-5-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato T1]
 gi|301386108|ref|ZP_07234526.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato Max13]
 gi|302060192|ref|ZP_07251733.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato K40]
 gi|302135135|ref|ZP_07261125.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato NCPPB 1108]
 gi|28851895|gb|AAO54970.1| inosine-5-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|213923695|gb|EEB57279.1| inosine-5-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tomato T1]
 gi|330872845|gb|EGH06994.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330965929|gb|EGH66189.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           actinidiae str. M302091]
 gi|331019366|gb|EGH99422.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           lachrymans str. M302278PT]
          Length = 489

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|71736928|ref|YP_273591.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|289626140|ref|ZP_06459094.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649046|ref|ZP_06480389.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|71557481|gb|AAZ36692.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|320322908|gb|EFW78998.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320329969|gb|EFW85957.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330869564|gb|EGH04273.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330894506|gb|EGH27167.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           mori str. 301020]
 gi|330985027|gb|EGH83130.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           lachrymans str. M301315]
          Length = 489

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|66044509|ref|YP_234350.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           syringae B728a]
 gi|63255216|gb|AAY36312.1| IMP dehydrogenase [Pseudomonas syringae pv. syringae B728a]
 gi|330895901|gb|EGH28186.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           japonica str. M301072PT]
 gi|330975918|gb|EGH75984.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           aptata str. DSM 50252]
          Length = 489

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|296109442|ref|YP_003616391.1| sugar isomerase (SIS) [Methanocaldococcus infernus ME]
 gi|295434256|gb|ADG13427.1| sugar isomerase (SIS) [Methanocaldococcus infernus ME]
          Length = 165

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 16/163 (9%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  +      KI   K RV I G+G+SG+IG      L      S+F+  A A     
Sbjct: 14  ENLDEEITFLSNKILNAK-RVFIFGVGRSGYIGRCFHIRLLHLNIDSYFLTDAPAF---- 68

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
               R DL+IV+S SG ++ +  +   A+     +  +              ++ LP E 
Sbjct: 69  ---KRGDLLIVISGSGETESVVNVAKKAKEIGEVIGVVCKCGNLKDIK----LIKLPVEK 121

Query: 167 ESC-PHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
            S  P G A      + L   D +   L+   N  E D    H
Sbjct: 122 NSFLPMGTAFEE---LALIFFDLVIAKLMRKLNLREEDIIKNH 161


>gi|118591263|ref|ZP_01548662.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
 gi|118436339|gb|EAV42981.1| hypothetical protein SIAM614_16592 [Stappia aggregata IAM 12614]
          Length = 122

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPKV 295
           L +    L++ + G V V D+   + GI++E DI R             V  VM K    
Sbjct: 2   LSEICETLAKHKIGAVVVSDDEGAVNGIVSERDIVRVIGTQGVSALKTPVSSVMTKTVVT 61

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             E+  +   M  + Q     + V+    K  G++   D+++F I
Sbjct: 62  CTEENNINEVMAQMTQGRFRHMPVL-KDGKLTGVISIGDVVKFKI 105


>gi|328884108|emb|CCA57347.1| Sialic acid utilization regulator, RpiR family [Streptomyces
           venezuelae ATCC 10712]
          Length = 305

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I GIG SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 151 RIDIYGIGASGLVAQDLGQKLLRIGLIAHAHSDPHLAVTNAVQLRSGDVAIAITHSGSTG 210

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +AIT      V  +AD +LT     ES     A  +S   QL +
Sbjct: 211 DVIEPLRVAFDHGATTVAITGRPDGPVTQYADHILTTSTARESE-LRPAAMSSRTSQLLV 269

Query: 186 GDALAIALLES 196
            D L   + + 
Sbjct: 270 VDCLFTCVTQR 280


>gi|309776699|ref|ZP_07671673.1| inosine-5'-monophosphate dehydrogenase [Erysipelotrichaceae
           bacterium 3_1_53]
 gi|308915447|gb|EFP61213.1| inosine-5'-monophosphate dehydrogenase [Erysipelotrichaceae
           bacterium 3_1_53]
          Length = 504

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/171 (22%), Positives = 67/171 (39%), Gaps = 13/171 (7%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCA 220
            KE         P  SAIMQ   G+ +A AL       F      + +    +  +    
Sbjct: 43  GKEEPELSLN-IPMVSAIMQSVSGEKMACALAREGGISFIYGSQTIENEAAMVRRVKATK 101

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFH 277
           +  ++S  +   ++    L D + +  E     +AV ++G    KL GIIT  D      
Sbjct: 102 AGFVYSDSN---IRPDATLQDVLDLKEETGHATMAVTEDGTPEGKLLGIITSRDYR--TS 156

Query: 278 KDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +      V D M    K+I   E   L+ A  L+ +H ++ L ++D+ +  
Sbjct: 157 RMDPATKVADFMTPFEKLIYGNEGCTLSEANDLIWEHKLNQLPIIDENKHL 207


>gi|71394071|gb|AAZ32110.1| hypothetical protein [uncultured euryarchaeote Alv-FOS5]
          Length = 202

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/138 (22%), Positives = 54/138 (39%), Gaps = 26/138 (18%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITIL--SEKRFGCVAVVDEGQKLKGIITEGDIFRN----- 275
           +    + + +V     L D I  +  S K      VVDE   L G+I+  DI +      
Sbjct: 41  ITKGKEDLAIVHPEDSLRDVIRAMLESPKTLSAY-VVDEDGVLIGVISVWDILQATVAHD 99

Query: 276 -----------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              +   +   ED+M + P  +     L  A +L+ +H ++ + 
Sbjct: 100 PDTINSGSPSILFDRDFIERYAFSEKAEDLM-REPVCVDLTHTLRRAYRLMVEHGLTEIP 158

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD+  + IG +  L+LL
Sbjct: 159 VVDNQGRIIGDLSMLELL 176



 Score = 36.0 bits (82), Expect = 7.3,   Method: Composition-based stats.
 Identities = 8/44 (18%), Positives = 20/44 (45%), Gaps = 1/44 (2%)

Query: 296 ILEDTLLTVAMQLLRQHNIS-VLMVVDDCQKAIGIVHFLDLLRF 338
           +  +  L   ++ + +   +    VVD+    IG++   D+L+ 
Sbjct: 51  VHPEDSLRDVIRAMLESPKTLSAYVVDEDGVLIGVISVWDILQA 94


>gi|323496713|ref|ZP_08101758.1| hypothetical protein VISI1226_06268 [Vibrio sinaloensis DSM 21326]
 gi|323318138|gb|EGA71104.1| hypothetical protein VISI1226_06268 [Vibrio sinaloensis DSM 21326]
          Length = 278

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/165 (22%), Positives = 66/165 (40%), Gaps = 3/165 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           I+ +  + SL+ + +       H   E +      +   G+G S  +G  LA  L   G 
Sbjct: 96  ISAQSAVDSLQDTAKLIDRKSLHRICELVHEAS-FIGCVGVGASSIVGRYLAYRLVRIGK 154

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +        +    G     DL    S SGS+ E+      A +   P++++T+ + S 
Sbjct: 155 KAIMYEDTHLAAMSAGRSCAGDLWFAASSSGSTKEVIHAASLAHQRGTPVVSLTNISHSP 214

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++  +D  L +   PE    G A  +  +  L + DAL   LL+ 
Sbjct: 215 LSAISDE-LLVAARPEGPLTGGAFASK-VGALLLVDALVNTLLDR 257


>gi|123969372|ref|YP_001010230.1| Mg2+ transporter [Prochlorococcus marinus str. AS9601]
 gi|123199482|gb|ABM71123.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus str. AS9601]
          Length = 468

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+   P  + I  L         V D+ + L GI++ 
Sbjct: 149 GRLMTTEFIDLKEMQTAEEALSLVRKRAPFTETIYSLY--------VTDKERHLTGILSL 200

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM ++   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 201 RDLVTA----DPSRPIGDVMTRDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 256

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 257 VTVDDLI 263



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 147 TAGRLMTTEFIDLKEMQTAEEALSLVRKRAPFTETIYSLYVTDKERHLTGILSLRDLVTA 206


>gi|332993851|gb|AEF03906.1| CBS domain-containing membrane protein [Alteromonas sp. SN2]
          Length = 134

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDL 280
           V +   L    T+ +E  F  + VV    +L+GII++ D+ +               K  
Sbjct: 8   VHMDDSLELIQTLFAETGFHHLVVV-HQNQLQGIISDRDVLKATSPFANTVNERFRDKAT 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  +M +N   +     +  A+ L   + IS + ++D+ +  +GIV + D++RF
Sbjct: 67  LEKKAHQIMTRNVLTLSASDSIVSAISLFNDNKISCIPIIDEKRCPVGIVSWRDVMRF 124


>gi|255714236|ref|XP_002553400.1| KLTH0D15906p [Lachancea thermotolerans]
 gi|238934780|emb|CAR22962.1| KLTH0D15906p [Lachancea thermotolerans]
          Length = 522

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/176 (18%), Positives = 66/176 (37%), Gaps = 23/176 (13%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--------ENDFYVLHPGGKLGTLFVCASDVM 224
             P  S+ M       +AI +               E    ++    K    F+      
Sbjct: 68  NTPFVSSPMDTVTESEMAIQMALLGGIGIIHHNCSPEQQAAMVRKVKKFENGFI------ 121

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLN 281
              +S  +V     + +A  + ++  F    V + G    KL GI+T  DI   F +D +
Sbjct: 122 ---NSPIVVSPTTTVAEAKAMRAKFGFCGFPVTESGSLPSKLIGIVTSRDI--QFIED-D 175

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           TL++ ++M K+         L+   ++L+      L ++D     + ++   DL++
Sbjct: 176 TLTIAEIMTKDLVTANVGVTLSEGNEILKNTKKGKLPIIDKDGNLVSMLSRTDLMK 231


>gi|167563019|ref|ZP_02355935.1| SIS domain protein [Burkholderia oklahomensis EO147]
          Length = 293

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLEKAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVITDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|34557352|ref|NP_907167.1| hypothetical protein WS0964 [Wolinella succinogenes DSM 1740]
 gi|34483068|emb|CAE10067.1| conserved hypothetical protein [Wolinella succinogenes]
          Length = 804

 Score = 69.2 bits (168), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/130 (20%), Positives = 70/130 (53%), Gaps = 2/130 (1%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G ++    + A  ++++ + I  +     L +A++++ E + G + ++ EG+++ G++TE
Sbjct: 123 GEEIYKTKLRARHLINAKNLIHKITPSHSLKEALSLMVENKIGTLPMLGEGERILGMLTE 182

Query: 270 GDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS-VLMVVDDCQKAI 327
             I R     ++      + + KNP ++ ED+ +   + +  +++ S  ++V+D  ++  
Sbjct: 183 RKIVRMVELGVSLESPAVEFIDKNPYLVHEDSFINEIIDIFEKNSDSLCVLVIDSSRELK 242

Query: 328 GIVHFLDLLR 337
           GI+   DLL+
Sbjct: 243 GIITKRDLLK 252



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 26/98 (26%), Positives = 43/98 (43%), Gaps = 1/98 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNP 293
           +G  L +    + E   G VA +DE  +  GI+TE DI R  F           + IK  
Sbjct: 17  LGATLKEVHERIKESGCGAVAFIDEESRPVGILTERDISRLLFEGCGFDDLAFPLAIKEL 76

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V  E+  L   + L+  +NI  +++ +   +  GI+ 
Sbjct: 77  VVSQENRDLEYVLSLMTGNNIRRIVICNKAGRYSGIIT 114



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 15/104 (14%), Positives = 47/104 (45%), Gaps = 12/104 (11%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--------VEDVMIKNP 293
            +++++      + + ++  +  GIIT+  IF    +++             ++++ K  
Sbjct: 88  VLSLMTGNNIRRIVICNKAGRYSGIITQDTIFHELGEEIYKTKLRARHLINAKNLIHK-- 145

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I     L  A+ L+ ++ I  L ++ + ++ +G++    ++R
Sbjct: 146 --ITPSHSLKEALSLMVENKIGTLPMLGEGERILGMLTERKIVR 187


>gi|311105399|ref|YP_003978252.1| hypothetical protein AXYL_02214 [Achromobacter xylosoxidans A8]
 gi|310760088|gb|ADP15537.1| CBS domain pair family protein 1 [Achromobacter xylosoxidans A8]
          Length = 152

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
               P+  A+  +SE+  G + V+ E   L G++T  +I R+ H        ++  +M  
Sbjct: 19  SPDMPVSQAVQTMSEQDIGSL-VIMEFGTLTGMLTFREIIRHMHAHGGAGDTTIRSIMDD 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  APVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLMGVISFYDMAQA 123


>gi|302185732|ref|ZP_07262405.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           syringae 642]
 gi|330969056|gb|EGH69122.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           aceris str. M302273PT]
          Length = 489

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|219853206|ref|YP_002467638.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219547465|gb|ACL17915.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 161

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/146 (17%), Positives = 58/146 (39%), Gaps = 36/146 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +  +++    + +A   + EK  G + V+D G +L G++T+ D+             
Sbjct: 7   MTTNPLVIQADAMVSEAARTMREKHVGGLPVLD-GTRLVGMVTDSDLLSLLKTGDLSDDL 65

Query: 274 ----------------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                                 R   +D++ + V +VM      I ++  ++ A  ++ +
Sbjct: 66  WLPSPLEIIEVPIREFINWEKTRGALRDISGMKVREVMSVPAITIDQEAEISEAAAVMLR 125

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLLR 337
             I  L V+D  +  +GIV   D+++
Sbjct: 126 EKIVRLPVMDK-RTLVGIVTRSDIVQ 150



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V ++M  NP VI  D +++ A + +R+ ++  L V+D   + +G+V   DLL
Sbjct: 1   MKVSEIMTTNPLVIQADAMVSEAARTMREKHVGGLPVLDGT-RLVGMVTDSDLL 53


>gi|251795216|ref|YP_003009947.1| 6-phospho 3-hexuloisomerase [Paenibacillus sp. JDR-2]
 gi|247542842|gb|ACS99860.1| 6-phospho 3-hexuloisomerase [Paenibacillus sp. JDR-2]
          Length = 183

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 62/166 (37%), Gaps = 8/166 (4%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           ++ A    L  LE +L+     +     ++I     ++ + G G+SG +    A  L   
Sbjct: 3   TLSAASSILQELERTLEAVKPSEIEALTKRITEAD-KIFVAGAGRSGLMMRAFAMRLMHM 61

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  ++ V            I   DL+++ S SG +  L ++   A+     +  +T   +
Sbjct: 62  GFRAYVVGETVTP-----GIAEGDLLLIGSGSGETKTLTSMAAKAQSIGAAVGVVTIMPE 116

Query: 150 SVVACHADIVLTLPKEPESCPHG--LAPTTSAIMQLAIGDALAIAL 193
           S +   A   +T+P   +    G    P  +   Q  +     I L
Sbjct: 117 STLGAAASSRVTIPAVTKDSTSGGSSQPMGTLFEQSLLLLLDTIVL 162


>gi|84489095|ref|YP_447327.1| hypothetical protein Msp_0268 [Methanosphaera stadtmanae DSM 3091]
 gi|84372414|gb|ABC56684.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 273

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 47/81 (58%), Gaps = 4/81 (4%)

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           V++  ++ GIIT  D+     KD+ + +VE +M K+  +  E+  +  A +++ +  IS 
Sbjct: 46  VEDNDEIVGIITASDL---LIKDI-SPTVEGMMSKDIVIANEELSINDAARVMFRLGISR 101

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L V D+ +K +GI+   D+LR
Sbjct: 102 LPVTDENKKVLGIITNTDILR 122


>gi|119358440|ref|YP_913084.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           phaeobacteroides DSM 266]
 gi|119355789|gb|ABL66660.1| glutamine--fructose-6-phosphate transaminase [Chlorobium
           phaeobacteroides DSM 266]
          Length = 622

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           +EK++  K R++I   G S H   IG  L    A    P    +A+E       +I+ DD
Sbjct: 301 LEKLRKAK-RIIICACGTSWHAGLIGEYLIEEFAR--IPVEVDYASE-FRYRTPIISPDD 356

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++V+S SG + +  A L  A+     ++ I +   S +A      +     PE    G+
Sbjct: 357 VVMVISQSGETADTLAALRMAKEKGALVMGICNVVGSTIARETTCGMYTHAGPE---IGV 413

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           A T +   Q+ +   LA+AL   R   + +  + 
Sbjct: 414 ASTKAFTAQVIVLYMLALALSIGRTIKDEEIALY 447


>gi|309972734|gb|ADO95935.1| Putative transcriptional regulator [Haemophilus influenzae R2846]
          Length = 288

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/186 (21%), Positives = 71/186 (38%), Gaps = 12/186 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            +     SL     +Q A+ +++ E   L  L+         Q    V+ +K  + R+ +
Sbjct: 92  EIMPSDDSLTIAQKLQAAVANVMEETINLLDLK---------QLEEVVKVLKKAR-RIFL 141

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG       + L   G            +    ++T  D+ I LS SG S E   
Sbjct: 142 FGVGSSGVTAEDAKNKLMRIGFQVDASGNNHFMYMQAALLTSSDVAIGLSHSGYSAETAH 201

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            +  A++     +A+T   +S V  +AD VL    +            + I QL + D +
Sbjct: 202 TIKIAKQNGATTVALTHSLRSPVTEYADYVLVNGNKQGKLQGDSI--GTKIAQLFVLDLI 259

Query: 190 AIALLE 195
              L++
Sbjct: 260 YALLVQ 265


>gi|330446341|ref|ZP_08309993.1| cyclic nucleotide-binding domain protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
 gi|328490532|dbj|GAA04490.1| cyclic nucleotide-binding domain protein [Photobacterium leiognathi
           subsp. mandapamensis svers.1.1.]
          Length = 625

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)

Query: 263 LKGIITEGDI-FRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + GIIT+ D+  R   + ++T  +V  VM   P  +  +  +  AM  + ++NI  L V+
Sbjct: 201 VAGIITDRDLCTRVLAEGISTSEAVSSVMTAEPITLDHNAYVFEAMLTMLRYNIHHLPVL 260

Query: 321 DDCQKAIGIVHFLDLLRF 338
              ++ IG++   D++R+
Sbjct: 261 -RNKQPIGVISVSDIVRY 277


>gi|270291059|ref|ZP_06197282.1| transcriptional regulator [Pediococcus acidilactici 7_4]
 gi|270280455|gb|EFA26290.1| transcriptional regulator [Pediococcus acidilactici 7_4]
          Length = 280

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/179 (22%), Positives = 72/179 (40%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S V  A +   A    L +   SL           V+ +   + +V I G+G S  + 
Sbjct: 87  SDSPVTVAEKVFAANADALKATVKSLSE---ADLATCVQLLLDAQ-QVGIFGLGASNIVA 142

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T     + H           +T  D+++++S SG   +  A+   A +  +
Sbjct: 143 LDGYHKFLRTPLDVVYAHDFHMQIMAATRLTAKDVMLLISHSGEDRDAIALANLALQHQV 202

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           PLI ITS   + +A  AD+ L +    E+     A   + I Q++I DAL +++    N
Sbjct: 203 PLILITSSANATLAKMADVTL-ISVAEEALYRSEA-LHALIAQMSIMDALFMSVAIKTN 259


>gi|297570022|ref|YP_003691366.1| polynucleotide adenylyltransferase region [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296925937|gb|ADH86747.1| Polynucleotide adenylyltransferase region [Desulfurivibrio
           alkaliphilus AHT2]
          Length = 885

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 1/104 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           +    +  A  +L+      + VVD+ +++ G+I+     +     L   SV D M  + 
Sbjct: 323 RPNISIRQADELLNRYNITVLPVVDDKRRVVGLISRRVAGKAIQLGLEEQSVSDYMSTDF 382

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLL 336
             +     L    +L+ +H   ++ VVD    +  G++   DLL
Sbjct: 383 ATLTPAATLGDIQELIIEHRQRIIPVVDGRNCELQGVITRTDLL 426



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 1/74 (1%)

Query: 261 QKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           ++L  I  E  + +  HK +       D+M         +  +  A +LL ++NI+VL V
Sbjct: 286 KELTNIEVEEKLIQVLHKQVRPRRRAADLMSSPVISARPNISIRQADELLNRYNITVLPV 345

Query: 320 VDDCQKAIGIVHFL 333
           VDD ++ +G++   
Sbjct: 346 VDDKRRVVGLISRR 359


>gi|228924893|ref|ZP_04088048.1| hypothetical protein bthur0011_57900 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
 gi|228834811|gb|EEM80295.1| hypothetical protein bthur0011_57900 [Bacillus thuringiensis
           serovar huazhongensis BGSC 4BD1]
          Length = 286

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 67/157 (42%), Gaps = 2/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L  ++    +     AV  +K  +  + I G+G S  I   +A      G  ++ + 
Sbjct: 109 VQTLHDTVGQLETKSIEKAVGFLKDAE-VIYIYGVGASFLIAEDVAQKWIRLGKQAYAIS 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                   +   +++ L   +S+SG + ++  ++  A+   +  I+++    S ++  AD
Sbjct: 168 DRHLLAVAMATQSKNALFWGISYSGETSDVIELMKVAKGLELKTISLSRLGTSPISDLAD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           + L   + PE+     A T+S   QL + D +  A  
Sbjct: 228 VSLFTARAPEAK-IRSAATSSRFAQLLVIDVIFFAYS 263


>gi|229086866|ref|ZP_04219026.1| transcriptional regulator [Bacillus cereus Rock3-44]
 gi|228696441|gb|EEL49266.1| transcriptional regulator [Bacillus cereus Rock3-44]
          Length = 210

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        +V     + DAI  +  +  G + VV++   L
Sbjct: 61  FYTGKTGGQLLSEAVKKVKVQDYQSRPVVVDKNISVYDAICTMFLEDVGTLFVVEQATLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  VAM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDVAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 180 VVKDMKQGLEVVGRITKTNITRA 202


>gi|254409964|ref|ZP_05023744.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196183000|gb|EDX77984.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1946

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 21/134 (15%)

Query: 219 CASDVMHSGDSIPL-VKIGCPLIDAITILSEK----------------RFGCVAVVDEGQ 261
               + H  D  PL ++    L++AI +L++                 R     +V E  
Sbjct: 21  TLPALEHFIDYHPLTIEAQATLVEAIALLNQGQSLSAYQSGQIAKEPERSHRCVLVTENS 80

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVL 317
            L GI+T   +       +N     V DVM+++P  +   E   L  A+ L   ++I  L
Sbjct: 81  ALIGIVTTRKLIELMLAGVNFQDTQVADVMMRSPVTLTLSESCHLFTALSLFESYSIDHL 140

Query: 318 MVVDDCQKAIGIVH 331
            V+D   K IG++ 
Sbjct: 141 PVLDKTGKLIGLIT 154


>gi|107101618|ref|ZP_01365536.1| hypothetical protein PaerPA_01002662 [Pseudomonas aeruginosa PACS2]
          Length = 131

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 1   MSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLAVRGLADGLGADR 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 60  PVREVMSGELRYCFEDEEVDHVAKNMAQLEKRRLPVMDRNKRLVGIVSLANI 111


>gi|290984992|ref|XP_002675210.1| predicted protein [Naegleria gruberi]
 gi|284088805|gb|EFC42466.1| predicted protein [Naegleria gruberi]
          Length = 146

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 50/124 (40%), Gaps = 2/124 (1%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   + M     +        L +  +++     GCV +V E  K  GIIT+ D+ + + 
Sbjct: 1   MHVKNFMIPAKQVITASPSSSLTEVGSLMVTNHIGCVLIV-ENSKPIGIITKSDMVKYYL 59

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ +    V++ M  N K + +      A   +    +  L+V D      GIV   D+L
Sbjct: 60  ENADIKKPVQEFMSTNLKTVKDTLETDQAATEMNSSKLHYLIVNDSKNNWEGIVSTKDVL 119

Query: 337 RFGI 340
              +
Sbjct: 120 EEEV 123


>gi|224541186|ref|ZP_03681725.1| hypothetical protein CATMIT_00339 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525831|gb|EEF94936.1| hypothetical protein CATMIT_00339 [Catenibacterium mitsuokai DSM
           15897]
          Length = 289

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 59/157 (37%), Gaps = 2/157 (1%)

Query: 12  TRKGHSLMKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           T K   +  + +V    +S+       ++ L+ ++    + +F   +E I+    RV + 
Sbjct: 87  THKSGEVSNDISVDNIPQSLQNILANKITELKQTVNLINTDEFREILEGIRDAS-RVQVI 145

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
            +G +  +    A      G P+      E        + + D++I +S SG SD++   
Sbjct: 146 AVGNTIPVAIDAAFKFNELGIPTTAGTIWETQLSYSFTLGKGDVLIAISNSGESDKVLEA 205

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           +  A       I IT+   S +       +T     +
Sbjct: 206 VKIANNNKAMTIGITNSPHSAIGEEVQYHITTATREK 242


>gi|229550833|ref|ZP_04439558.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus
           LMS2-1]
 gi|258538455|ref|YP_003172954.1| transcriptional regulator RpiR family [Lactobacillus rhamnosus Lc
           705]
 gi|229315783|gb|EEN81756.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus
           LMS2-1]
 gi|257150131|emb|CAR89103.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus Lc
           705]
          Length = 280

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 2/171 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    S     AV+ I     ++ + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLTNLDSAALTKAVDWITHA-NQLGLFGLGASNLVALDGYHKFLRTAIPVVYAA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T  D +I+ S SG   +  A+   A++ ++PLI IT    S +A  AD
Sbjct: 163 DYHMQLMAATHLTAADAMILTSHSGKDKDAIALAELAKKQNVPLIVITGAPGSHLAKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
               +    ES     A          +     I+ +++ + +   F  + 
Sbjct: 223 AAF-VAVAEESRYRTEALHALIAELSLMDTLFMISAIQTNSQTAPLFRRVR 272


>gi|186681602|ref|YP_001864798.1| hypothetical protein Npun_F1129 [Nostoc punctiforme PCC 73102]
 gi|186464054|gb|ACC79855.1| CBS domain containing protein [Nostoc punctiforme PCC 73102]
          Length = 206

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 48/115 (41%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFR---NFHKDLN 281
               +  ++    + +A+ ++ EK+   + V +       GI+TE DI      + KD  
Sbjct: 8   MTKDVVTIRGSATVAEAVVLMKEKKLRALVVDIRHENDAYGIVTETDIVYKVTAYGKDPK 67

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V ++M K   V+  D  +    +L     I    V+    K +GI+   D+L
Sbjct: 68  QVWVYEIMSKPCIVVNPDLGVEYVARLFANTGIHRAPVI--QGKLLGIISITDIL 120



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
           +  ED+M K+   I     +  A+ L+++  +  L VVD      A GIV   D++
Sbjct: 2   MKAEDIMTKDVVTIRGSATVAEAVVLMKEKKLRAL-VVDIRHENDAYGIVTETDIV 56


>gi|15668626|ref|NP_247424.1| inosine monophosphate dehydrogenase [Methanocaldococcus jannaschii
           DSM 2661]
 gi|2495992|sp|Q57892|Y450_METJA RecName: Full=Uncharacterized protein MJ0450
 gi|1591154|gb|AAB98439.1| inosine monophosphate dehydrogenase isolog [Methanocaldococcus
           jannaschii DSM 2661]
          Length = 186

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 52/117 (44%), Gaps = 6/117 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDL---N 281
                +V     + D   ++ E+   CV VV E    +   + T+ DI +         +
Sbjct: 11  MKKPIVVSGDVSVYDVAKLMVEQDVPCVLVVCERPNHESIEVATDKDIIKKVLIRKLPPD 70

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + VED+       I  +T +  A++++ ++  + L +VDD  K +G++   DL++ 
Sbjct: 71  KVKVEDISSGKLVTIPPNTTIDEALEIMNKYKTNELFIVDD-GKIVGVITEEDLIKI 126



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  S   +  +     + +A+ I+++ +   + +VD+  K+ G+ITE D+ +
Sbjct: 71  KVKVEDISSGKLVTIPPNTTIDEALEIMNKYKTNELFIVDD-GKIVGVITEEDLIK 125


>gi|88706830|ref|ZP_01104530.1| protein containing HTH rpiR-type DNA-binding domain [Congregibacter
           litoralis KT71]
 gi|88698880|gb|EAQ95999.1| protein containing HTH rpiR-type DNA-binding domain [Congregibacter
           litoralis KT71]
          Length = 294

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 61/162 (37%), Gaps = 7/162 (4%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L +L   L  +L       V+++   +  +   G+G S  +             P    
Sbjct: 111 SLRALGEQLAPDL---VDAVVDQLLGAR-HIFFFGLGISSAVAQDAEHHFFRFSLPVTAH 166

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                          DDL  ++S +G + +L  +   A+     +IA+T+E  S +A  +
Sbjct: 167 ADVLMQRMHAAAAHEDDLFFIISHTGRTRDLVDVANLAKARGATVIALTAE-ASPLAKAS 225

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + + L    ++  +   P TS +  LA+ D LA  +   R 
Sbjct: 226 SLAIELEVSEDTDAY--MPMTSRLAHLAVLDVLAAGVSLRRG 265


>gi|330957541|gb|EGH57801.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 489

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|302542661|ref|ZP_07295003.1| putative signal-transduction protein [Streptomyces hygroscopicus
           ATCC 53653]
 gi|302460279|gb|EFL23372.1| putative signal-transduction protein [Streptomyces himastatinicus
           ATCC 53653]
          Length = 134

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE DI  +    +D +  +      
Sbjct: 20  IGPAHTLRQAARLMSARRVGSAIVLDPDTSGLGILTERDILNSLGADQDPDHETAHAHTT 79

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + + Q     L+V+ +  + +G+V   D++R
Sbjct: 80  ADAVFAAPGWTLEEAARTMSQGGFRHLIVL-EAGEPVGVVSVRDIIR 125



 Score = 39.1 bits (90), Expect = 0.94,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 21/52 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D     +GI+   D+L
Sbjct: 9   VRDAMSSVVLTIGPAHTLRQAARLMSARRVGSAIVLDPDTSGLGILTERDIL 60


>gi|224477873|ref|YP_002635479.1| hypothetical protein Sca_2391 [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222422480|emb|CAL29294.1| conserved hypothetical protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 270

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/135 (21%), Positives = 47/135 (34%), Gaps = 2/135 (1%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
                +V   G+G SG   S+        G        A        +++  D+ + +S 
Sbjct: 115 LKTSRQVSYAGLGSSGLTASEFYHRTLRMGVKGMVSTDAHQMKISASLLSSKDMFVAISN 174

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + EL      A      +  IT+   S +  HAD+VL      +S  H      + I
Sbjct: 175 SGETTELAEAAQIAHNQGAYVAVITNYEGSTITKHADLVLITS--DQSRIHDTRFINTQI 232

Query: 181 MQLAIGDALAIALLE 195
               + D +   LL 
Sbjct: 233 ATTFLMDIVCYLLLN 247


>gi|315231709|ref|YP_004072145.1| hypothetical protein TERMP_01947 [Thermococcus barophilus MP]
 gi|315184737|gb|ADT84922.1| hypothetical protein TERMP_01947 [Thermococcus barophilus MP]
          Length = 179

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 48/140 (34%), Gaps = 17/140 (12%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-- 272
                    +        V    PL   +    +       VVDE  +L G IT  D+  
Sbjct: 35  RYISKVPVKLVMDTDFLKVHPEDPLT-TLIENLKGEETSAVVVDEKNRLLGFITMKDLLH 93

Query: 273 -----FRNFHKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                 R     L  L          VED+M+  P  I  D  L  A++L+ +     L 
Sbjct: 94  FFSPPRRYSIVGLGLLKRYTLNRASRVEDIMVTKPITIHIDDNLGHAIKLMIETGKHHLP 153

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           VVD  +   GI+   D++R 
Sbjct: 154 VVDGEKHVHGILEVKDIIRL 173


>gi|169829570|ref|YP_001699728.1| hypothetical protein Bsph_4137 [Lysinibacillus sphaericus C3-41]
 gi|168994058|gb|ACA41598.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
          Length = 419

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    +   D+         +K    +     +      G   VV    KL G+IT  
Sbjct: 166 QLIKKDILFIEDIYVPMTDTAALKNDETIRHFQKLNERTTHGAFPVVTHQNKLVGMITVK 225

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     ++ N L VE VM KNP        +  A   +    I +L +VDD     G++
Sbjct: 226 DV---IGREENEL-VEKVMTKNPIAGSMKMSVASAGHRMIWEGIDLLPIVDDDNILQGVI 281

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 282 SRQDVLKA 289


>gi|330465740|ref|YP_004403483.1| inosine 5-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
 gi|328808711|gb|AEB42883.1| inosine 5-monophosphate dehydrogenase [Verrucosispora maris
           AB-18-032]
          Length = 479

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 61/181 (33%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P   A M    G  +A  +           D     P G +  + 
Sbjct: 31  LDVDLATGDGTGTTIPLVVANMTAVAGRRMAETVARRGGIVVIPQDI----PIGVVAEVV 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     ++   +     + DAI +L ++ +G V VVDE  +  G++TE D      
Sbjct: 87  AWVKQRHLVHETAVALGPTDTVGDAIHLLPKRAYGAVIVVDEAGRPMGVVTEAD---TVG 143

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D     ++DVM  +   +            L +    +  VVDD  + +G++     LR
Sbjct: 144 VDRF-AQLQDVMSADLHTVPASADPRTGFDRLSEGRRRLAPVVDDDGRLVGVLTRQGALR 202

Query: 338 F 338
            
Sbjct: 203 A 203


>gi|316935762|ref|YP_004110744.1| CBS domain-containing membrane protein [Rhodopseudomonas palustris
           DX-1]
 gi|315603476|gb|ADU46011.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           DX-1]
          Length = 142

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 52/124 (41%), Gaps = 11/124 (8%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           H   ++  V     + +         F    VV E Q++ G++T+ D    F        
Sbjct: 12  HMTRAVKAVSRELTMRELEDKFEHDDFNAYPVV-EDQRVIGMVTKYDFLNCFAFHPTQML 70

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               DL   +V D+M  +   +  DT LT  +QL+ +H    + V+D  +K  GI+   D
Sbjct: 71  PHYDDLMNRTVGDIMSADFLYVHSDTKLTRVLQLMVEHQTRSIPVLDADRKLDGIISRED 130

Query: 335 LLRF 338
           +++ 
Sbjct: 131 VIKA 134



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/84 (21%), Positives = 33/84 (39%), Gaps = 7/84 (8%)

Query: 200 SENDF---YVLHPGGKLGTL---FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC 253
           ++ DF   +  HP   L             + S D +  V     L   + ++ E +   
Sbjct: 54  TKYDFLNCFAFHPTQMLPHYDDLMNRTVGDIMSADFLY-VHSDTKLTRVLQLMVEHQTRS 112

Query: 254 VAVVDEGQKLKGIITEGDIFRNFH 277
           + V+D  +KL GII+  D+ +   
Sbjct: 113 IPVLDADRKLDGIISREDVIKALA 136



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 22/57 (38%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +V D M +  K +  +  +          + +   VV + Q+ IG+V   D L
Sbjct: 4   FLEATVADHMTRAVKAVSRELTMRELEDKFEHDDFNAYPVV-EDQRVIGMVTKYDFL 59


>gi|310643700|ref|YP_003948458.1| rpir family transcriptional regulator [Paenibacillus polymyxa SC2]
 gi|309248650|gb|ADO58217.1| RpiR family transcriptional regulator [Paenibacillus polymyxa SC2]
          Length = 288

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 50/134 (37%), Gaps = 2/134 (1%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            +   R+ + G+  S  +       L   G  S     +         +  +D+   +S+
Sbjct: 129 LSATSRIDLYGMATSSIVAQDFYQKLIRIGKNSTAFADSHMQITSASSLGAEDVAFAVSY 188

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + E  A L  A+      +++TS   + +A  ADI L      E    G     S I
Sbjct: 189 SGETQETIAALRCAKEQGAKTLSLTSFGNNTLASLADIALFSSSLEEGMRRGD--MASRI 246

Query: 181 MQLAIGDALAIALL 194
            QL I D L   ++
Sbjct: 247 AQLHIIDILFTGMV 260


>gi|293402010|ref|ZP_06646150.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium
           5_2_54FAA]
 gi|291304668|gb|EFE45917.1| 6-phospho 3-hexuloisomerase [Erysipelotrichaceae bacterium
           5_2_54FAA]
          Length = 186

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/183 (19%), Positives = 69/183 (37%), Gaps = 16/183 (8%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + L+   +++  E + QF   +++       +   G G+SG      A  L   G  S+ 
Sbjct: 12  KELTHTLTAIDQEAAKQFVSLIDQ----GDEIFCDGAGRSGFQVKGFAMRLMHMGIHSYV 67

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
           V      +     I+ + ++++ S SG +  L      A+     +  IT   +S +A  
Sbjct: 68  VGETCTPN-----ISENGVLVICSGSGETKSLVNHAAKAKEMGARVALITINTESTIAKM 122

Query: 156 ADIVLTLPKE-----PESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           AD+V+ +         +     + P  S   Q      D   + L+E RN + +  +  H
Sbjct: 123 ADVVVEISAPSPKSAKQGDIKSIQPMGSLFEQSEGIFMDIAVMMLMEKRNMTSDTMFGRH 182

Query: 209 PGG 211
              
Sbjct: 183 ANM 185


>gi|46580320|ref|YP_011128.1| CBS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602299|ref|YP_966699.1| CBS domain-containing protein [Desulfovibrio vulgaris DP4]
 gi|46449737|gb|AAS96387.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562528|gb|ABM28272.1| CBS domain containing protein [Desulfovibrio vulgaris DP4]
 gi|311233698|gb|ADP86552.1| CBS domain containing membrane protein [Desulfovibrio vulgaris
           RCH1]
          Length = 150

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
              S   V     +  A  IL E++F  + VVD+  +L G+I + D+             
Sbjct: 8   MTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLITQHKKLNIPSFF 67

Query: 273 --------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              + ++   V+  M  +P  +  +T +     L+    +  L 
Sbjct: 68  TVLDGFIPLTSMSELDEQMRRISATIVKHAMTADPVTVTPETAIDEIASLMVDSKLHTLP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV +  K +G++   DLLR
Sbjct: 128 VV-ENGKLVGVIGKEDLLR 145



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L   D+M  +P  +  DT +  A ++L +   + L VVDD  + +G++   DL+
Sbjct: 2   LKARDIMTASPVTVAPDTEIAKAARILVERKFNGLPVVDDSGRLVGVICQSDLI 55


>gi|307292454|ref|ZP_07572308.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0411]
 gi|306496485|gb|EFM66048.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0411]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 265 ITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI---DVETLDQQRGKASSVGDILNKD 321

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 322 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 360



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 243 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI 299


>gi|295397066|ref|ZP_06807178.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
 gi|294974658|gb|EFG50373.1| conserved hypothetical protein [Aerococcus viridans ATCC 11563]
          Length = 211

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/127 (17%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +    +  +     + +A+  +   +   + V  +  +  G+IT+  I      D  +L
Sbjct: 5   QYMSKDVITISPETSVTEAVAKMESHQIHNLPVT-KNGQFVGLITQDIIDAKSASDATSL 63

Query: 284 SVEDV------------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           SV ++            M K       + ++  A + +R +N+ VL +VD+ +   GI+ 
Sbjct: 64  SVYELNYILSQADVEKFMDKKAATATTEWMVEEAAEYMRTNNLRVLPIVDENKTVQGIIT 123

Query: 332 FLDLLRF 338
           + D+ + 
Sbjct: 124 YKDIFKA 130



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + ++  M K+   I  +T +T A+  +  H I  L V     + +G++   D++   
Sbjct: 1   MKIKQYMSKDVITISPETSVTEAVAKMESHQIHNLPVT-KNGQFVGLIT-QDIIDAK 55


>gi|209520969|ref|ZP_03269706.1| CBS domain containing membrane protein [Burkholderia sp. H160]
 gi|209498606|gb|EDZ98724.1| CBS domain containing membrane protein [Burkholderia sp. H160]
          Length = 369

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   L  ++ E  + + F +  N L  EDVM ++   +  DT    A +L ++H++  L 
Sbjct: 198 DTDDLYSLLRETQL-QAFSRSFNELRCEDVMSRHVVSVSPDTRAAAAWELFKRHHVKALP 256

Query: 319 VVDDCQKAIGIVHFLDLL-RFG 339
           VVD  QK +GIV   D + R G
Sbjct: 257 VVDAGQKLLGIVTRADFVERKG 278



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 42/128 (32%), Gaps = 17/128 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
               +  V        A  +        + VVD GQKL GI+T  D              
Sbjct: 227 MSRHVVSVSPDTRAAAAWELFKRHHVKALPVVDAGQKLLGIVTRADFVERKGFGVLAPML 286

Query: 275 -----NFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                    D L T +V  VM  +   +     +   + +        + V+D   + +G
Sbjct: 287 NYFDGWLRGDALRTSTVGRVMTADVCTVAATAPIIELVPMFANFGHHHIPVLDRAGRVVG 346

Query: 329 IVHFLDLL 336
           ++  +DL+
Sbjct: 347 MITQVDLI 354


>gi|327440916|dbj|BAK17281.1| FOG: CBS domain [Solibacillus silvestris StLB046]
          Length = 215

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 62/143 (43%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY         T  +    V        +V     + DAI  +  +  G + V+D+ + L
Sbjct: 64  FYAGKKTTAAFTESMLNLKVKDFQSIPVVVPDDMTVYDAIIHMFSEDVGTLFVIDKDEIL 123

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
           +G+++  D+ R+    +DLN + V  +M + P     +  D+L+  A +L+    I  + 
Sbjct: 124 QGVLSRKDLLRSSIGTQDLNKMPVHIIMTRMPNIAYCVNSDSLIVAAKKLIE-REIDSMP 182

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV++ ++     G +   ++ R 
Sbjct: 183 VVEETERGLVITGRLTKTNITRA 205



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F + +  L V+D     P V+ +D  +  A+  +   ++  L V+D  +   G++   D
Sbjct: 73  AFTESMLNLKVKDFQSI-PVVVPDDMTVYDAIIHMFSEDVGTLFVIDKDEILQGVLSRKD 131

Query: 335 LLRFGI 340
           LLR  I
Sbjct: 132 LLRSSI 137


>gi|325959929|ref|YP_004291395.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325331361|gb|ADZ10423.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 133

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 55/118 (46%), Gaps = 7/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKD 279
               +  V      +DA   + ++    + V+D     KG+++  D+       R  + +
Sbjct: 7   MNQGVITVNPESKPLDAFKKMYKEGVRRLFVLDADGDPKGVVSYSDLIGVLGSLRPTNSE 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +LS+ D+M ++   I  D  +  A  L+ + ++S L+V++   K +G++   D+ R
Sbjct: 67  MASLSISDIMSEDVMTIDSDNGIEDAANLMVRADVSGLLVLEKD-KPVGVITRTDICR 123



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 2/57 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           V++ M +    +  ++    A + + +  +  L V+D      G+V + DL+  G++
Sbjct: 3   VKEAMNQGVITVNPESKPLDAFKKMYKEGVRRLFVLDADGDPKGVVSYSDLI--GVL 57


>gi|320193257|gb|EFW67895.1| 6-phospho-3-hexuloisomerase [Escherichia coli WV_060327]
          Length = 186

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE++       Q    + +I+  +  + + G G+SG      A+ L   G     V 
Sbjct: 11  LHELENNALKIDDSQAAQFISQIRNAR-HIFLQGAGRSGIAIRAFANRLLHLGFSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H   G     DL+I+ S SG +  LK++   A    + +  +T +  S +   A 
Sbjct: 70  EISSPHTQTG-----DLLIIGSGSGETTSLKSLAQKAVDSGVNVALVTMKADSTIGKLAQ 124

Query: 158 IVLTLPKEPESCPHGLA-----PTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            VL LP   +   + +A     P  SA  Q      DA+ +AL+     S    +  H
Sbjct: 125 SVLVLPGSVKDDNNRVAGTFAQPMGSAFEQLCFITYDAIVLALMSELGESSATMFTRH 182


>gi|313900469|ref|ZP_07833962.1| 6-phospho 3-hexuloisomerase [Clostridium sp. HGF2]
 gi|312954531|gb|EFR36206.1| 6-phospho 3-hexuloisomerase [Clostridium sp. HGF2]
          Length = 186

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 59/181 (32%), Gaps = 13/181 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L  +L      Q    V+ I      V   G G+SG      A  L   G  S+ V 
Sbjct: 11  LQELTHTLSSIDEVQAEKFVQLIDEAD-EVFCAGAGRSGFQVKGFAMRLMHMGVASYVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                +     I    +++V S SG +  L      A+     +  IT    S +A  AD
Sbjct: 70  ETCTPN-----IKEGGVLVVCSGSGETKSLVNHAAKAKEMGARVALITINPNSSIANMAD 124

Query: 158 IVLTLPKE-----PESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLHPG 210
           +V+ +         +     + P  S   Q      D   + L+E R    +  +  H  
Sbjct: 125 VVIEISAPSPKSAKQGDIKSIQPMGSLFEQSEGIFMDIAVMMLMERRGKDSDTMFGRHAN 184

Query: 211 G 211
            
Sbjct: 185 M 185


>gi|304386192|ref|ZP_07368525.1| glutamine-fructose-6-phosphate transaminase [Pediococcus
           acidilactici DSM 20284]
 gi|304327549|gb|EFL94776.1| glutamine-fructose-6-phosphate transaminase [Pediococcus
           acidilactici DSM 20284]
          Length = 605

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 64/290 (22%), Positives = 115/290 (39%), Gaps = 47/290 (16%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHA 98
           E  L  + +  F  A+       G++ I G G S   G +G KL    A    P+  V A
Sbjct: 270 EKYLDSKGAVHFDKAMLDKLNQAGKIYIVGAGTSYHAGLVGKKLLERFAK--VPTEVVLA 327

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKA-ILYYARRFSIPLIAITSENKSVVACHAD 157
           +E ++ D  +I +D   I LS SG + + +  ++     +  P + IT+   S +A  A+
Sbjct: 328 SEFAYDD-PIIEKDAFFIFLSQSGETADSRQVLVRVNDEWQKPSLTITNVANSTLAREAE 386

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN-DFYVLHPGGKLGTL 216
              TL   PE     +A T +   Q+A+   LA+A+   +  +   DF +      +   
Sbjct: 387 FSATLEAGPEIA---VASTKAYTAQIAVEALLAVAMGRMKQINAATDFDIAGQLSMVANA 443

Query: 217 FVCASDVMHSGDSIPL-------------------VKIGCPLIDAITILS---------- 247
                D   + + +                     V +   L   +  +S          
Sbjct: 444 IQTVVDEKAAIEQLAKDTLLKARNTFYIGRGLDYAVALEASLK--LKEISYIQAEGFAAG 501

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
           E + G +A+++EG  + GIIT+G        D    ++E+V+ +  +VI 
Sbjct: 502 ELKHGTIALIEEGTPVIGIITQGK-----TADHTRSNLEEVISRGAQVIT 546


>gi|295136416|ref|YP_003587092.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
           profunda SM-A87]
 gi|294984431|gb|ADF54896.1| Inosine monophosphate dehydrogenase-related protein [Zunongwangia
           profunda SM-A87]
          Length = 155

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 48/104 (46%), Gaps = 7/104 (6%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVEDVMIKN 292
           + + +  L + +     VV++  +L GII++ D        R F+  +  + +E+ M  +
Sbjct: 40  VAEVMEALLKNKISGAPVVNDRYELVGIISDADCMKQISESRYFNMPIGDMKIENYMSTD 99

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VI ++  +    QL   ++     VV +  K IG++   D+L
Sbjct: 100 VAVIHKNLSIFDCAQLFYNNSYRRFPVV-ENGKLIGMISRKDIL 142



 Score = 53.4 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 273 FRNFHKDLNTLS--VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            R     + +    VED M  +      D  +   M+ L ++ IS   VV+D  + +GI+
Sbjct: 9   RRAAPVKIESAPIMVEDYMTSSLITFKRDQYVAEVMEALLKNKISGAPVVNDRYELVGII 68

Query: 331 HFLDLLR 337
              D ++
Sbjct: 69  SDADCMK 75


>gi|289548551|ref|YP_003473539.1| CBS domain and cyclic nucleotide- regulated nucleotidyltransferase
           [Thermocrinis albus DSM 14484]
 gi|289182168|gb|ADC89412.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Thermocrinis albus DSM 14484]
          Length = 609

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 56/144 (38%), Gaps = 11/144 (7%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVK---IGCPLIDAITIL--SEKRFGC 253
           F+           +  + +    +V      I  V        L +A+  +  S +R   
Sbjct: 122 FTRKILKRFDTKYRQESSWDKLLEVKVKDLGIRPVPILEPNTSLKEAVREMLLSGQRCAL 181

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
             + DE     GI+TE D+ +   ++ +    VE +       + EDT L  A+ ++ +H
Sbjct: 182 TKIQDE----WGILTERDVMKAVEEETDIRTPVEKLATVPIIGVEEDTPLLEALTVMTKH 237

Query: 313 NISVLMVVDDCQKAIGIVHFLDLL 336
            +S L+V        G++   D+L
Sbjct: 238 GLSKLVVF-KEGIPTGVIEERDIL 260


>gi|254525375|ref|ZP_05137427.1| magnesium transporter [Prochlorococcus marinus str. MIT 9202]
 gi|221536799|gb|EEE39252.1| magnesium transporter [Prochlorococcus marinus str. MIT 9202]
          Length = 468

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+   P  + I  L         V D+ + L GI++ 
Sbjct: 149 GRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLY--------VTDKERHLTGILSL 200

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM ++   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 201 RDLVTA----DPSKPIGDVMTRDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 256

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 257 VTVDDLI 263



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 147 TAGRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLYVTDKERHLTGILSLRDLVTA 206


>gi|296270401|ref|YP_003653033.1| IMP dehydrogenase family protein [Thermobispora bispora DSM 43833]
 gi|296093188|gb|ADG89140.1| IMP dehydrogenase family protein [Thermobispora bispora DSM 43833]
          Length = 479

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/174 (17%), Positives = 59/174 (33%), Gaps = 10/174 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P   A M    G  +A  +           D     P   +  + 
Sbjct: 31  LDVDLTTSDGSGTTIPIVVANMTAVAGRRMAETVARRGGLVVIPQDI----PIDVVAEVI 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+   +     + +A+++L ++  G V VVD   +  G++TE D      
Sbjct: 87  RWVKSRHLVYDTPITLTPHDTVGEALSLLPKRAHGAVIVVDWENRPIGVVTEADC----Q 142

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                  +  VM  +P+ + +      A + L + N  +  VVD   + +G++ 
Sbjct: 143 GVDMFTQLGQVMTASPQTLPDGIDPQSAFEALHEGNHRLAPVVDREGRLVGVLT 196



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           P  +     +  A+ LL +     ++VVD   + IG+V   D 
Sbjct: 99  PITLTPHDTVGEALSLLPKRAHGAVIVVDWENRPIGVVTEADC 141


>gi|218905434|ref|YP_002453268.1| CBS domain protein [Bacillus cereus AH820]
 gi|218539524|gb|ACK91922.1| CBS domain protein [Bacillus cereus AH820]
          Length = 210

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/143 (24%), Positives = 63/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+ +    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMEXIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    +G +   ++ R 
Sbjct: 180 VVKDTKQGLEVVGRITKTNITRA 202


>gi|157414237|ref|YP_001485103.1| Mg2+ transporter [Prochlorococcus marinus str. MIT 9215]
 gi|157388812|gb|ABV51517.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus str. MIT 9215]
          Length = 468

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+   P  + I  L         V D+ + L GI++ 
Sbjct: 149 GRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLY--------VTDKERHLTGILSL 200

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM ++   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 201 RDLVTA----DPSKPIGDVMTRDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 256

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 257 VTVDDLI 263



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 147 TAGRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLYVTDKERHLTGILSLRDLVTA 206


>gi|156932738|ref|YP_001436654.1| hypothetical protein ESA_00527 [Cronobacter sakazakii ATCC BAA-894]
 gi|156530992|gb|ABU75818.1| hypothetical protein ESA_00527 [Cronobacter sakazakii ATCC BAA-894]
          Length = 275

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 62/146 (42%), Gaps = 3/146 (2%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           AL +++ E   + +L  + Q         A + +   +  V I G+  S  IG  L   L
Sbjct: 91  ALDALVEE--SVQALRDTAQLLDRAVLEQAAQALHQARS-VQIYGVAASAIIGEYLHYKL 147

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G  +        +  +   +   DL++ +S SGS+ +L   +  AR+   P++ +++
Sbjct: 148 LRLGKAAHLFSDMHRASMNATTLGETDLVVAISSSGSTRDLLHAVTLARKAGAPVLTLSN 207

Query: 147 ENKSVVACHADIVLTLPKEPESCPHG 172
             +S +A  ++++L   K       G
Sbjct: 208 TPRSPLASLSNMLLVAAKPEGPLNAG 233


>gi|126466196|ref|YP_001041305.1| signal transduction protein [Staphylothermus marinus F1]
 gi|126015019|gb|ABN70397.1| putative signal transduction protein with CBS domains
           [Staphylothermus marinus F1]
          Length = 316

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 58/130 (44%), Gaps = 14/130 (10%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-- 277
                     +  ++ G P+ +A+  + +  F  + VV E   + GIIT  DI + F   
Sbjct: 181 VKVADVMSSPVVTIESGRPIKEAMEKIIKYGFRRIPVVGEN-VVLGIITAMDIIKYFGTH 239

Query: 278 -----------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                      ++   + V+D+M++   +I  D  L +A   + + N+   +VV+D  + 
Sbjct: 240 EAFKNTVSGDIREALKIPVDDIMVRELVIIKPDDDLGLAAHKMAEKNVGSALVVNDKMEL 299

Query: 327 IGIVHFLDLL 336
           +GIV   D+L
Sbjct: 300 LGIVTERDIL 309



 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
              +  +  I   L + +  +     G V +V    ++ GIITE D+ +     ++  + 
Sbjct: 123 MEKNPIVAYIDEKLSNILEKMVMNEIGIVPIVLRDGRVYGIITEHDLIKYLSYSISIGVK 182

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM      I     +  AM+ + ++    + VV      +GI+  +D++++
Sbjct: 183 VADVMSSPVVTIESGRPIKEAMEKIIKYGFRRIPVV-GENVVLGIITAMDIIKY 235



 Score = 53.4 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/146 (15%), Positives = 52/146 (35%), Gaps = 18/146 (12%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  +           + +   +       PL++A+  +++     V  V    K+ G++ 
Sbjct: 29  PNFEDRIYKSTEELEIIAKKPVKQASPSTPLLEAVEEMAKGYRSLVITV--SNKIAGLLL 86

Query: 269 EGDIFRNFHKDLNTLSVED----------------VMIKNPKVILEDTLLTVAMQLLRQH 312
              +            VE+                +M KNP V   D  L+  ++ +  +
Sbjct: 87  STHVINYLGGGEYFKIVEERHGYNIYSALQEPVQSIMEKNPIVAYIDEKLSNILEKMVMN 146

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I ++ +V    +  GI+   DL+++
Sbjct: 147 EIGIVPIVLRDGRVYGIITEHDLIKY 172



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 37/173 (21%), Positives = 61/173 (35%), Gaps = 25/173 (14%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI---VLTLP 163
           G+IT  DLI  LS+S     +   +  A   S P++ I S      A    I      +P
Sbjct: 162 GIITEHDLIKYLSYS-----ISIGVKVADVMSSPVVTIESGRPIKEAMEKIIKYGFRRIP 216

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
              E+   G                +  A+   + F  ++ +     G +          
Sbjct: 217 VVGENVVLG----------------IITAMDIIKYFGTHEAFKNTVSGDIREAL-KIPVD 259

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 + ++K    L  A   ++EK  G   VV++  +L GI+TE DI    
Sbjct: 260 DIMVRELVIIKPDDDLGLAAHKMAEKNVGSALVVNDKMELLGIVTERDILYAL 312


>gi|52548378|gb|AAU82227.1| conserved hypothetical protein [uncultured archaeon GZfos11H11]
 gi|52548643|gb|AAU82492.1| conserved hypothetical protein [uncultured archaeon GZfos18B6]
          Length = 290

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/211 (18%), Positives = 74/211 (35%), Gaps = 12/211 (5%)

Query: 135 RRFSIPLIAITSENKSVVAC---HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           R  SI + A       V A     + ++   P+ P     GL   T       +G+   +
Sbjct: 69  RDISIKICAKMGTPGEVTAKGIMTSPLITIGPEAPVETACGLLAETDIRRLPVMGNDKLV 128

Query: 192 ALLESRNF---SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSE 248
            ++  RN    +       +P              + + + I  V     +      + E
Sbjct: 129 GIISVRNILTGAPEYVQRFYPAEGELVSEQLEVGDVMTLEVIT-VDEDTVVSKISKDMEE 187

Query: 249 KRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKNPKVILEDTLLTVA 305
              G V +   G K  G++T+ DI        K  + +  + +M      I  D  +  A
Sbjct: 188 SEIGGVVIT-RGGKPIGMVTDRDIASKVIMADKKASEIKAKAIMRSPLITIGPDASVEKA 246

Query: 306 MQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ++   +I  + V+D+  K +GI+   ++L
Sbjct: 247 CGIMAAKDIRRMPVMDED-KLVGIISVRNIL 276



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 41/105 (39%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVMIK 291
               +      +     G V +  E  K  GI+T+ DI       + T   ++ + +M  
Sbjct: 35  EDTSVTIIARDMELSEIGSVVITRED-KPVGIVTDRDISIKICAKMGTPGEVTAKGIMTS 93

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +  A  LL + +I  L V+    K +GI+   ++L
Sbjct: 94  PLITIGPEAPVETACGLLAETDIRRLPVM-GNDKLVGIISVRNIL 137


>gi|300691302|ref|YP_003752297.1| hypothetical protein RPSI07_1652 [Ralstonia solanacearum PSI07]
 gi|299078362|emb|CBJ51012.1| conserved protein of unknown function, CBS
           (cystathionine-beta-synthase) domain [Ralstonia
           solanacearum PSI07]
          Length = 151

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 60/126 (47%), Gaps = 7/126 (5%)

Query: 218 VCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +  SD++H  G+++  V     L  A+  ++E   G + VV E  +L G++T  +I    
Sbjct: 1   MKVSDILHVKGNTLYTVAPETKLQVAVQTMAEYDIGSL-VVMEYGELVGMLTFREIILVL 59

Query: 277 HKD----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +      +  ++  VM  +P     +T +    +++ + +   L V+D+ +  +G++ F
Sbjct: 60  ARGNGKVDDGTTIRKVMDDHPLTCTPETEVNEVRRMMLERHARYLPVLDN-RTLMGVISF 118

Query: 333 LDLLRF 338
            D+ + 
Sbjct: 119 YDVAKA 124


>gi|209695861|ref|YP_002263791.1| hypothetical protein VSAL_I2437 [Aliivibrio salmonicida LFI1238]
 gi|208009814|emb|CAQ80121.1| conserved hypothetical protein [Aliivibrio salmonicida LFI1238]
          Length = 147

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 51/124 (41%), Gaps = 12/124 (9%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +   + M +     L++    L DA T++ E     + +++    L G++T+ D+     
Sbjct: 1   MFTVNDMMTTHPHTLLRSN-SLEDAKTLMDEHCIRHIPIIETDDTLIGLVTQRDLLAAQE 59

Query: 278 KDLNTLSVEDV----------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
             L   + E++          M KN   I     L  A   +++H +  L VV +  K +
Sbjct: 60  SCLEKPTFEEISTLDIPLNSIMHKNVMSISPHGGLKAAAVFMQKHKVGCLPVV-EHGKLV 118

Query: 328 GIVH 331
           GI+ 
Sbjct: 119 GIIT 122



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V D+M  +P  +L    L  A  L+ +H I  + +++     IG+V   DLL  
Sbjct: 2   FTVNDMMTTHPHTLLRSNSLEDAKTLMDEHCIRHIPIIETDDTLIGLVTQRDLLAA 57



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 19/89 (21%), Positives = 31/89 (34%), Gaps = 1/89 (1%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           +   D   I L+  R+        L          +          ++  +     L  A
Sbjct: 38  IIETDDTLIGLVTQRDLLAAQESCLEKPTFEEISTLDIPLNSIMHKNVMSISPHGGLKAA 97

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGD 271
              + + + GC+ VV E  KL GIIT+ D
Sbjct: 98  AVFMQKHKVGCLPVV-EHGKLVGIITDSD 125


>gi|126697160|ref|YP_001092046.1| Mg2+ transporter [Prochlorococcus marinus str. MIT 9301]
 gi|126544203|gb|ABO18445.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus str. MIT 9301]
          Length = 468

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+   P  + I  L         V D+ + L GI++ 
Sbjct: 149 GRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLY--------VTDKERHLTGILSL 200

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM ++   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 201 RDLVTA----DPSRPIGDVMTRDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 256

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 257 VTVDDLI 263



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 147 TAGRLMTTEFIDLKEMQTAAEALSLVRKRAPFTETIYSLYVTDKERHLTGILSLRDLVTA 206


>gi|76802907|ref|YP_331002.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76558772|emb|CAI50365.1| CBS domain protein 7 [Natronomonas pharaonis DSM 2160]
          Length = 145

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 43/105 (40%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIK 291
           +   P+ +A   + ++    + +V E    +GI+T  D+         ++   VE+ M +
Sbjct: 29  QPETPIQEAAQTMLDQSINSLIIVGEDGHPEGILTSTDLVHVVADQTPIDDSRVEEYMNQ 88

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              V   +T +  A   +       L VV+D    IGI+   DL 
Sbjct: 89  VDTVTTANTSIQEAADTMMARGTHHLPVVEDEAGLIGILTTTDLT 133



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V  +M         +T +  A Q +   +I+ L++V +     GI+   DL+
Sbjct: 17  VGRIMSSPVATTQPETPIQEAAQTMLDQSINSLIIVGEDGHPEGILTSTDLV 68


>gi|28377934|ref|NP_784826.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254556118|ref|YP_003062535.1| transcription regulator [Lactobacillus plantarum JDM1]
 gi|28270768|emb|CAD63673.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|254045045|gb|ACT61838.1| transcription regulator [Lactobacillus plantarum JDM1]
          Length = 292

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 5/162 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           SSL+ + Q         AVE +   +  +   G+G S             TG P      
Sbjct: 115 SSLDQTSQVMTEADLKRAVELLLNARS-IGFYGLGGSAVAALDGYHKFVRTGIPCAHNSD 173

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +        +   D+ +V+S +G + +   +L      S+P+IA+TS   S +A  + +
Sbjct: 174 YDMQLMQAAQMNASDVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTV 233

Query: 159 V-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             +++ +E      GL   TS I Q++I D+L +      N 
Sbjct: 234 AFISVAEEINYRSEGL---TSLIAQMSIIDSLFLMTAVHGNI 272


>gi|320586531|gb|EFW99201.1| inosine-5 -monophosphate dehydrogenase imd2 [Grosmannia clavigera
           kw1407]
          Length = 544

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 65/189 (34%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++VL  P           P  S+ M       +AI +            V+H       
Sbjct: 67  SEVVLDSPVTKRISL--KTPFVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSPDA 119

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G+   KL GI+T
Sbjct: 120 QADMVRKVKRYENGFIVDPVVISRDTTVEEAKALKEKWGFGGFPVTETGRLGSKLLGIVT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     +D ++ SV  VM+ +         L  A ++L Q     L +VD     + 
Sbjct: 180 NRDIQF---EDDSSRSVSHVMVTDLVTAPLGVTLVEANKILSQSKKGKLPIVDKDGNLVS 236

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 237 MISRSDLTK 245



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 26/44 (59%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            +G  L++A  ILS+ + G + +VD+   L  +I+  D+ +N H
Sbjct: 205 PLGVTLVEANKILSQSKKGKLPIVDKDGNLVSMISRSDLTKNIH 248


>gi|315282317|ref|ZP_07870751.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria marthii FSL S4-120]
 gi|313614038|gb|EFR87748.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria marthii FSL S4-120]
          Length = 394

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AITI+ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITIMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVNEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITIMKEKRVDTLLVVDEGNVLKGFI 296


>gi|307544108|ref|YP_003896587.1| RpiR family transcriptional regulator [Halomonas elongata DSM 2581]
 gi|307216132|emb|CBV41402.1| transcriptional regulator, RpiR family [Halomonas elongata DSM
           2581]
          Length = 287

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 63/161 (39%), Gaps = 3/161 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
              +LE + +         A+E +   +  +V    G S  +  +L   L   G      
Sbjct: 101 ATQTLEVNRELMEQADVAGAIELLDGARQILVFGAGGGSTMLAQELQFRLVRLGYAISAY 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +         +  DD+++ LS SG + E+      AR++   ++AIT+   S +A  A
Sbjct: 161 PQSLLPRMVASTLEPDDVVVTLSVSGYTPEIVESAQIARQYGARVVAITANG-SPLAETA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           D+VL +        +   P+ S    LA  D LA+ L    
Sbjct: 220 DVVLPVAARETDFIYH--PSASRYAVLAAIDVLALELALRH 258


>gi|256854286|ref|ZP_05559650.1| glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis T8]
 gi|257421114|ref|ZP_05598104.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294781278|ref|ZP_06746624.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis PC1.1]
 gi|256709846|gb|EEU24890.1| glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis T8]
 gi|257162938|gb|EEU92898.1| ABC glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis X98]
 gi|294451614|gb|EFG20070.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis PC1.1]
 gi|323480048|gb|ADX79487.1| glycine betaine/carnitine/choline transport ATP-binding protein
           OpuA [Enterococcus faecalis 62]
          Length = 394

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI---DVETLDQQRGKASSVGDILNKD 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 319 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 357



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 240 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI 296


>gi|295697008|ref|YP_003590246.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus tusciae DSM 2912]
 gi|295412610|gb|ADG07102.1| putative signal transduction protein with CBS and DRTGG domains
           [Bacillus tusciae DSM 2912]
          Length = 435

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/89 (22%), Positives = 42/89 (47%), Gaps = 5/89 (5%)

Query: 250 RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
                 VVD   ++ G++T  D+      + +   VE +M KNP  +   T +  A  ++
Sbjct: 220 GHSRFPVVDPQLRVVGMLTSKDV----TGEPDEAPVERLMSKNPITVTPKTSVASAAHIM 275

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               I +L VV + ++ +G++   D+++ 
Sbjct: 276 VWEGIELLPVV-ENRRLMGVISRQDVIKA 303


>gi|284162241|ref|YP_003400864.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012238|gb|ADB58191.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 689

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 3/127 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
            G        +         +K    L +AI +++E   G + +V+   KL  + +E D 
Sbjct: 564 AGKKIAERYRLKDIAKKPITIKSNATLAEAIRVMAENNIGILPIVN-NGKLVAVFSERDA 622

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R      +   +V +   KNPKV+     + VA++L+   N+  ++ V++  +   +  
Sbjct: 623 VRAIANGASLEDNVMNYATKNPKVVRSSDPVKVAIELMLNLNVRHVIGVEND-RPRCVAS 681

Query: 332 FLDLLRF 338
             D+L+ 
Sbjct: 682 VRDILQI 688



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/135 (17%), Positives = 48/135 (35%), Gaps = 11/135 (8%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L       + V   G  +    +  PL   +  +       V V     ++ G I   +
Sbjct: 494 ALAKGIDLDAKVCDVGIDVRCCDVREPLPIVLETMEAYNVRDVPVC-SNGRIVGYIDARE 552

Query: 272 IF------RNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           +       R            ++D+  K P  I  +  L  A++++ ++NI +L +V + 
Sbjct: 553 LLAETVGLRALAGKKIAERYRLKDIA-KKPITIKSNATLAEAIRVMAENNIGILPIV-NN 610

Query: 324 QKAIGIVHFLDLLRF 338
            K + +    D +R 
Sbjct: 611 GKLVAVFSERDAVRA 625


>gi|226306883|ref|YP_002766843.1| hypothetical protein RER_33960 [Rhodococcus erythropolis PR4]
 gi|226186000|dbj|BAH34104.1| hypothetical protein RER_33960 [Rhodococcus erythropolis PR4]
          Length = 192

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 52/107 (48%), Gaps = 9/107 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--------LSVEDVM 289
            + D +  ++   F  + VVDE ++L GI++EGD+ R+  + L+          SV DVM
Sbjct: 19  SVGDCLREIARSGFSALPVVDEQKRLVGIVSEGDLLRSGFERLSQEHATESTEQSVADVM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +    + ED ++      + +  +  + +V +    IG+V   DL+
Sbjct: 79  TQPVVAMTEDVVVNDIASEMLRSGLRAVPIVRERD-VIGVVTRQDLI 124



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +   D+M      I +   +   ++ + +   S L VVD+ ++ +GIV   DLLR G
Sbjct: 1   MRARDIMSSPVTTIDQARSVGDCLREIARSGFSALPVVDEQKRLVGIVSEGDLLRSG 57


>gi|237807793|ref|YP_002892233.1| DNA-binding transcriptional regulator HexR [Tolumonas auensis DSM
           9187]
 gi|237500054|gb|ACQ92647.1| transcriptional regulator, RpiR family [Tolumonas auensis DSM 9187]
          Length = 283

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/163 (20%), Positives = 63/163 (38%), Gaps = 4/163 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ LE +     +   +  V+ +   K ++   G+G S  +     +       P     
Sbjct: 103 IACLEVAKNSLDTTAVNRCVDLLTQAK-KISFFGLGASSAVAHDALNKFFRFNIPVVCFD 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++V+S +G +  L  I   AR     +I IT+   S +A   +
Sbjct: 162 DIVMMRMSCINSSDGDVVVVISHTGRTKALVEIAALARHNDATVIGITA-QDSPLAAQCN 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +VL++    ++  +   P  S I QLA+ D LA      R   
Sbjct: 221 LVLSMDVPEDTDVY--LPMASRIAQLALIDVLATGFTLRRGVK 261


>gi|104784394|ref|YP_610892.1| RpiR family transcriptional regulator [Pseudomonas entomophila L48]
 gi|95113381|emb|CAK18109.1| putative transcriptional regulator, RpiR family [Pseudomonas
           entomophila L48]
          Length = 288

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L  +       AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREHLDPQ---ALQQAVTAMAQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAVCISQSGRSKDLLITANLVRESGAN 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|29375453|ref|NP_814607.1| glycine betaine/carnitine/choline transporter, ATP-binding protein
           [Enterococcus faecalis V583]
 gi|227520112|ref|ZP_03950161.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis TX0104]
 gi|227554977|ref|ZP_03985024.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis HH22]
 gi|229546710|ref|ZP_04435435.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis TX1322]
 gi|229548803|ref|ZP_04437528.1| ABC superfamily ATP binding cassette transporter, ATPase
           [Enterococcus faecalis ATCC 29200]
 gi|255971320|ref|ZP_05421906.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255973939|ref|ZP_05424525.1| glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis T2]
 gi|256617738|ref|ZP_05474584.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis ATCC 4200]
 gi|256761624|ref|ZP_05502204.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis T3]
 gi|256957273|ref|ZP_05561444.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis DS5]
 gi|256959993|ref|ZP_05564164.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis Merz96]
 gi|256964311|ref|ZP_05568482.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis HIP11704]
 gi|257077753|ref|ZP_05572114.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis JH1]
 gi|257081113|ref|ZP_05575474.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis E1Sol]
 gi|257083782|ref|ZP_05578143.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis Fly1]
 gi|257089279|ref|ZP_05583640.1| ABC glycine betaine/L-proline transporter ATP-binding protein
           [Enterococcus faecalis CH188]
 gi|257415432|ref|ZP_05592426.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis AR01/DG]
 gi|257418463|ref|ZP_05595457.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis T11]
 gi|293383744|ref|ZP_06629651.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Enterococcus faecalis R712]
 gi|293388780|ref|ZP_06633273.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Enterococcus faecalis S613]
 gi|307267944|ref|ZP_07549332.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX4248]
 gi|307271865|ref|ZP_07553133.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0855]
 gi|307277299|ref|ZP_07558401.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX2134]
 gi|307278438|ref|ZP_07559513.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0860]
 gi|312901592|ref|ZP_07760864.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0470]
 gi|312904425|ref|ZP_07763585.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0635]
 gi|312907041|ref|ZP_07766037.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis DAPTO 512]
 gi|312952865|ref|ZP_07771726.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0102]
 gi|312978703|ref|ZP_07790430.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis DAPTO 516]
 gi|29342913|gb|AAO80677.1| glycine betaine/carnitine/choline transporter, ATP-binding protein
           [Enterococcus faecalis V583]
 gi|227072456|gb|EEI10419.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis TX0104]
 gi|227175886|gb|EEI56858.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis HH22]
 gi|229306032|gb|EEN72028.1| ABC superfamily ATP binding cassette transporter, ATPase
           [Enterococcus faecalis ATCC 29200]
 gi|229308170|gb|EEN74157.1| possible quaternary-amine-transporting ATPase [Enterococcus
           faecalis TX1322]
 gi|255962338|gb|EET94814.1| glycine betaine/L-proline ABC transporter [Enterococcus faecalis
           T1]
 gi|255966811|gb|EET97433.1| glycine betaine/carnitine/choline transporter [Enterococcus
           faecalis T2]
 gi|256597265|gb|EEU16441.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis ATCC 4200]
 gi|256682875|gb|EEU22570.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis T3]
 gi|256947769|gb|EEU64401.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis DS5]
 gi|256950489|gb|EEU67121.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis Merz96]
 gi|256954807|gb|EEU71439.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis HIP11704]
 gi|256985783|gb|EEU73085.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecalis JH1]
 gi|256989143|gb|EEU76445.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis E1Sol]
 gi|256991812|gb|EEU79114.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis Fly1]
 gi|256998091|gb|EEU84611.1| ABC glycine betaine/L-proline transporter ATP-binding protein
           [Enterococcus faecalis CH188]
 gi|257157260|gb|EEU87220.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis ARO1/DG]
 gi|257160291|gb|EEU90251.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis T11]
 gi|291078820|gb|EFE16184.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Enterococcus faecalis R712]
 gi|291081937|gb|EFE18900.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Enterococcus faecalis S613]
 gi|306504944|gb|EFM74139.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0860]
 gi|306506006|gb|EFM75174.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX2134]
 gi|306511371|gb|EFM80373.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0855]
 gi|306515585|gb|EFM84112.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX4248]
 gi|310627026|gb|EFQ10309.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis DAPTO 512]
 gi|310629168|gb|EFQ12451.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0102]
 gi|310632252|gb|EFQ15535.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0635]
 gi|311288410|gb|EFQ66966.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis DAPTO 516]
 gi|311291313|gb|EFQ69869.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0470]
 gi|315027053|gb|EFT38985.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX2137]
 gi|315029033|gb|EFT40965.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX4000]
 gi|315032351|gb|EFT44283.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0017]
 gi|315034390|gb|EFT46322.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0027]
 gi|315148025|gb|EFT92041.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX4244]
 gi|315149626|gb|EFT93642.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0012]
 gi|315153152|gb|EFT97168.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0031]
 gi|315155171|gb|EFT99187.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0043]
 gi|315157705|gb|EFU01722.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0312]
 gi|315167871|gb|EFU11888.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX1341]
 gi|315174890|gb|EFU18907.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX1346]
 gi|315574096|gb|EFU86287.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0309B]
 gi|315577224|gb|EFU89415.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0630]
 gi|315581755|gb|EFU93946.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0309A]
 gi|327534448|gb|AEA93282.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Enterococcus faecalis OG1RF]
 gi|329577857|gb|EGG59278.1| choline ABC transporter, ATP-binding protein OpuBA [Enterococcus
           faecalis TX1467]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 265 ITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI---DVETLDQQRGKASSVGDILNKD 321

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 322 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 360



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 243 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI 299


>gi|14521911|ref|NP_127388.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
           abyssi GE5]
 gi|5459131|emb|CAB50617.1| hps D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
           abyssi GE5]
          Length = 406

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 77/214 (35%), Gaps = 24/214 (11%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           +VTRK   L  +  ++   +++      +  +   L+     +    V+ +     ++ I
Sbjct: 198 AVTRKIIDLFWDEYMRTIRKAMKDITEHIEEVADKLK---LEEVRGLVDAMIGA-NKIFI 253

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G G+SG +G   A  L       + V                DL+I +S SG +  +  
Sbjct: 254 YGAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEEGDLLIAISGSGETRTIVD 308

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPT 176
               A++    ++AITS   S +   AD+V+ +P   ++                  AP 
Sbjct: 309 AAEIAKQQGGKVVAITSYRDSTLGKLADVVVEIPGRTKADLPTDYIARQMLTKYKWTAPM 368

Query: 177 TSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +      +   D +   L+ +   +E D    H
Sbjct: 369 GTLFEDSTMIFLDGIIALLMATFQKTEKDMRKKH 402


>gi|332365336|gb|EGJ43099.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK1059]
          Length = 282

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSFWENQKLNGYYR 277

Query: 219 CASD 222
             + 
Sbjct: 278 RNTH 281


>gi|330720725|gb|EGG98953.1| putative transmembrane protein [gamma proteobacterium IMCC2047]
          Length = 286

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 34/64 (53%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R + +    +  + +M ++   +   T L  A  LLR H I VL V+DD ++ +GIV  +
Sbjct: 130 RAYTRKFGEVRCKHIMSRDVITVAPSTPLEEAWSLLRAHKIKVLPVLDDDRQVVGIVSLV 189

Query: 334 DLLR 337
           D ++
Sbjct: 190 DFVK 193



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/142 (17%), Positives = 53/142 (37%), Gaps = 18/142 (12%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IF 273
             F            +  V    PL +A ++L   +   + V+D+ +++ GI++  D + 
Sbjct: 134 RKFGEVRCKHIMSRDVITVAPSTPLEEAWSLLRAHKIKVLPVLDDDRQVVGIVSLVDFVK 193

Query: 274 RNFHKDLNTL-----------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           R   K  + +                  V ++M+     + E   +   + LL    +  
Sbjct: 194 RAHLKGFDDMYEQLEGFVKGQEGKPPPHVSEIMVSPVFSVNERDFIAQIVPLLSDQGMHH 253

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + V+D  Q+  GI+   DL+  
Sbjct: 254 VPVLDADQQLAGIITQSDLIAA 275


>gi|238756979|ref|ZP_04618167.1| Hex regulon repressor [Yersinia aldovae ATCC 35236]
 gi|238704809|gb|EEP97338.1| Hex regulon repressor [Yersinia aldovae ATCC 35236]
          Length = 295

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +              +  D
Sbjct: 125 NRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGD 183

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  + + AR     +IAITS   + +A  A + L L    ++  +  
Sbjct: 184 VVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLANEATLSLLLDVPEDTDVY-- 240

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
            P  S I QL + D LA      R     D
Sbjct: 241 MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 270


>gi|221210065|ref|ZP_03583046.1| CBS domain containing protein [Burkholderia multivorans CGD1]
 gi|221170753|gb|EEE03219.1| CBS domain containing protein [Burkholderia multivorans CGD1]
          Length = 164

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 48/129 (37%), Gaps = 6/129 (4%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T     +++M        V     +  A  ++     G + V D   +L  I+T+ DI 
Sbjct: 19  ETFMYRVNEIMSRDVVC--VAPTDTIRHAAELMQRFDIGVLPVCD-HGELVAIVTDRDIA 75

Query: 274 -RNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            R      +    V  V  +  +   ED  +    Q +    +  + V+D  ++ +GIV 
Sbjct: 76  VRALAHGRSPDTPVRAVASEPVQWCTEDEGVGDVQQRMADVQLHRMPVLDRHRRVVGIVS 135

Query: 332 FLDL-LRFG 339
             D+  R G
Sbjct: 136 LGDIATRAG 144


>gi|193084430|gb|ACF10083.1| putative signal transduction protein [uncultured marine
           crenarchaeote SAT1000-21-C11]
          Length = 138

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 53/114 (46%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
              ++  ++     +DA  ++SEK      V+ +     G+++E D  +    +    S 
Sbjct: 8   MEKNVITIEHNKTALDAARLISEKDV-SFLVIMKDNSPVGVLSESDFVKRLAANDKKASA 66

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + ++M  N + +  +T L  A+Q +   NI  L+++DD  K +G++   DL 
Sbjct: 67  VIISEIMSSNFRWVEPETELEDAIQKMLNSNIRRLVILDD-NKLVGVITQTDLT 119



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             + D+M KN   I  +     A +L+ + ++S L+++      +G++   D ++
Sbjct: 2   AQIRDIMEKNVITIEHNKTALDAARLISEKDVSFLVIM-KDNSPVGVLSESDFVK 55



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/74 (21%), Positives = 27/74 (36%), Gaps = 3/74 (4%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            SE+DF                        +   V+    L DAI  +       + ++D
Sbjct: 48  LSESDFVKR--LAANDKKASAVIISEIMSSNFRWVEPETELEDAIQKMLNSNIRRLVILD 105

Query: 259 EGQKLKGIITEGDI 272
           +  KL G+IT+ D+
Sbjct: 106 DN-KLVGVITQTDL 118


>gi|323350916|ref|ZP_08086574.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis VMC66]
 gi|322122898|gb|EFX94604.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis VMC66]
          Length = 283

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSFWENQKLNGYYR 277

Query: 219 CASD 222
             + 
Sbjct: 278 RNTH 281


>gi|228935975|ref|ZP_04098785.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
 gi|228823743|gb|EEM69565.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           andalousiensis BGSC 4AW1]
          Length = 214

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 44/118 (37%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
           +    +  AI  +S K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  RPNDTIETAIRTISTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/50 (20%), Positives = 24/50 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +    I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLRPNDTIETAIRTISTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|182417891|ref|ZP_02949202.1| transcriptional regulator, RpiR family [Clostridium butyricum 5521]
 gi|237669359|ref|ZP_04529341.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378200|gb|EDT75734.1| transcriptional regulator, RpiR family [Clostridium butyricum 5521]
 gi|237655246|gb|EEP52804.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 275

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/139 (18%), Positives = 53/139 (38%), Gaps = 4/139 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + +   +  L+   + L  E   +    + K+   K RV + G G S     ++     
Sbjct: 91  KQVLDTYQELLNKSYALLDEEQMVR----ITKLFNQKKRVYVYGRGSSALAAQEIKLRFM 146

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G     +  +     +  ++  D L+I +S SG +DE+   L  A+  +   + ITS 
Sbjct: 147 RIGVNIESIVDSHIMKMNFVLLNSDCLVIGISVSGKTDEVLDSLRAAKSRNATTVLITSR 206

Query: 148 NKSVVACHADIVLTLPKEP 166
            +       D ++ L  + 
Sbjct: 207 KEKEFEEFCDEIILLAVKE 225


>gi|138896855|ref|YP_001127308.1| putative regulator [Geobacillus thermodenitrificans NG80-2]
 gi|134268368|gb|ABO68563.1| Putative regulator [Geobacillus thermodenitrificans NG80-2]
          Length = 248

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/153 (20%), Positives = 60/153 (39%), Gaps = 8/153 (5%)

Query: 22  STVQCALRSIIAEK-----RGLSSLESSLQGELSFQFHCAVEKIKA---IKGRVVITGIG 73
           S ++  L++I  +        +   ++ +   L       VE+I        RV+I  +G
Sbjct: 65  SELKYILKTIDDQAIPVGENTIERYKADMNQTLDSLERKHVEEISQLIFEANRVLIVAVG 124

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  IG   +  L     PS +V+ +        M+   D++I +S SG +  +      
Sbjct: 125 LSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKDMVIFISSSGETKTIVQAAEK 184

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            R  +I  +AIT+   S +A      ++   + 
Sbjct: 185 LRFKNIETVAITNSADSTLAKLVRKHISAYVQR 217


>gi|300705476|ref|YP_003747079.1| hypothetical protein RCFBP_21323 [Ralstonia solanacearum CFBP2957]
 gi|299073140|emb|CBJ44498.1| conserved protein of unknown function
           (cystathionine-beta-synthase-CBS domain) [Ralstonia
           solanacearum CFBP2957]
          Length = 378

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 48/159 (30%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP---LVKIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P    V     +  A+ +L      
Sbjct: 208 WLDIDPEDLTALLQEMQQQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVK 267

Query: 253 CVAVVDEGQKLKGIITEGD------------IFRNFHKDLNTLS-VEDVMIKNPKVILED 299
            + V+D G++L GI+T  D            +   F     T   V  VM      I  D
Sbjct: 268 SLPVLDNGRRLIGIVTRADLTGTAARVPRQRLRDWFAIGAMTPPRVSGVMTPRVLTIRAD 327

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + L        + VVD   +  GI+   D++  
Sbjct: 328 APMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHA 366



 Score = 39.9 bits (92), Expect = 0.57,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ DI    ++
Sbjct: 324 IRADAPMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHALYR 369


>gi|262362830|gb|ACY59551.1| rpiR-family transcriptional regulatory protein [Yersinia pestis
           D106004]
          Length = 272

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 10/139 (7%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S +Q A+ ++++E   L S+ES  Q          V K+     R+ I G+G SG     
Sbjct: 110 SKLQSAINNVLSETLNLLSIESVEQ----------VVKVLRPADRICIFGVGSSGITAED 159

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
               L   G            +    ++   D+ I +S SG+S E    L  A+      
Sbjct: 160 AKGKLMRIGLRVDAATNNHFMYMQASLMNPGDVAIGISHSGTSAETVQALKLAKEAGATT 219

Query: 142 IAITSENKSVVACHADIVL 160
           +A+T    S +   AD VL
Sbjct: 220 VALTHNMGSRITELADYVL 238


>gi|260887942|ref|ZP_05899205.1| inosine-5'-monophosphate dehydrogenase [Selenomonas sputigena ATCC
           35185]
 gi|330838572|ref|YP_004413152.1| IMP dehydrogenase [Selenomonas sputigena ATCC 35185]
 gi|260862342|gb|EEX76842.1| inosine-5'-monophosphate dehydrogenase [Selenomonas sputigena ATCC
           35185]
 gi|329746336|gb|AEB99692.1| IMP dehydrogenase [Selenomonas sputigena ATCC 35185]
          Length = 500

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 60/159 (37%), Gaps = 8/159 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P TSAIMQ    D +AIAL      S   +    P  +   +    +       S   
Sbjct: 51  NIPMTSAIMQAVSNDTMAIALAREGGVSF-IYGSQTPEQEAAMISRVKNYKSGFVSSDSN 109

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
           +K    L + + +        +AV ++     KL GI+T  D      +      V+D M
Sbjct: 110 IKPTTTLGEVLALKDATGHSTMAVTEDGTPNGKLVGIVTSRDYR--VTRMSFDTPVKDFM 167

Query: 290 IK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                      +  L  A  L+ +H +++L ++D+ Q+ 
Sbjct: 168 TPFERLIYADANLTLPQANDLIWEHKLNMLPLIDENQRL 206


>gi|257463277|ref|ZP_05627675.1| RpiR-family transcriptional regulator [Fusobacterium sp. D12]
 gi|317060857|ref|ZP_07925342.1| conserved hypothetical protein [Fusobacterium sp. D12]
 gi|313686533|gb|EFS23368.1| conserved hypothetical protein [Fusobacterium sp. D12]
          Length = 283

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/194 (20%), Positives = 76/194 (39%), Gaps = 5/194 (2%)

Query: 9   KSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           K V      +  + ++Q   + +  E   + ++E +       +   AV+ ++  K R++
Sbjct: 81  KQVNIIDSEINSDDSLQEVCQKVAHEN--VRAIEDTYSLLDFKELEKAVKALEKAK-RIM 137

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G G SG +   L+  L   G    F          L  +   D++ V+S+SG + E+ 
Sbjct: 138 ILGAGFSGVVAKDLSYKLLELGKDVVFEMDFHIQLSLLSTMGAKDILFVISYSGKTKEVY 197

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            I   A+   I +I +T+   + +    DI L       +        +  I Q+ + D 
Sbjct: 198 EITKKAKERGILIITLTTIAGNPIRDLGDISLNT--VELNKNFRATALSPRISQMTVIDM 255

Query: 189 LAIALLESRNFSEN 202
           L + L+      E 
Sbjct: 256 LYVRLILENKEMEE 269


>gi|120603534|ref|YP_967934.1| signal-transduction protein [Desulfovibrio vulgaris DP4]
 gi|120563763|gb|ABM29507.1| putative signal-transduction protein with CBS domains
           [Desulfovibrio vulgaris DP4]
          Length = 574

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
               PGG   +   C + +       PL       L +A   + E +   V V  E  + 
Sbjct: 15  GRRDPGGADTSPPSCLTPLSSLVLHPPLTLDRETSLGEAAARMVEAQVSAVLV-GEATRP 73

Query: 264 KGIITEGDIFRNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +GIITE DI R   +     +   +  VM      I E +    A+  + +H I  L+VV
Sbjct: 74  EGIITERDITRLVAEHRGMAHARPLGRVMRGGVVTIGEGSTTGEAVLRMAEHGIRHLLVV 133

Query: 321 DDCQKAIGIVHFLDLL 336
                  GI+   DLL
Sbjct: 134 SGEGTPRGILEERDLL 149


>gi|45656159|ref|YP_000245.1| hypothetical protein LIC10254 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45599392|gb|AAS68882.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 206

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 49/106 (46%), Gaps = 2/106 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
              P+  A  I  +KRF  V V+++   L GI+++ D  R    H    T ++ ++M   
Sbjct: 90  EDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMRWRLEHNPDTTQTIGEIMKTK 149

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     +    ++L +  I  L +++D  + IGI+   D+LR 
Sbjct: 150 ILSVQIHARILEISKVLFEERIGCLPIINDKIEVIGIITRSDILRA 195



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 26/58 (44%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+TL  +D+M       LED  +  A ++  Q     + V++      GI+   D +R
Sbjct: 72  LSTLMAKDLMTSPVVSFLEDNPIKRAEEIFVQKRFRHVPVLNQKNTLCGILSDRDWMR 129



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 28/46 (60%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V+I   +++   +L E+R GC+ ++++  ++ GIIT  DI R   K
Sbjct: 153 VQIHARILEISKVLFEERIGCLPIINDKIEVIGIITRSDILRAILK 198


>gi|329766155|ref|ZP_08257714.1| CBS domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137426|gb|EGG41703.1| CBS domain-containing protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 283

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 10/113 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLSVED 287
           +K    + DA+  + + +F    VV       GI+TE DI R   +D     +N + ++ 
Sbjct: 12  IKPESSIFDALLEM-QTKFVKHIVVAVKDIPVGIVTERDINRFLGEDKTAHAINEIPIKH 70

Query: 288 VMIKNPKVIL---EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM KN   I    ED  +  A + +    I  +++V+D  + IGIV   DL +
Sbjct: 71  VMQKNVISITDGMEDHFVQCAAR-METFKIGSVVLVNDNGEIIGIVSRTDLTK 122



 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 1/118 (0%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              VM          +    +     +   + G V +V++  ++ GI++  D+ +++   
Sbjct: 68  IKHVMQKNVISITDGMEDHFVQCAARMETFKIGSVVLVNDNGEIIGIVSRTDLTKSYASV 127

Query: 280 LNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                SV+  M K      ++  L     L+ ++ +S ++V D+    IG++    LL
Sbjct: 128 FGGRYSVKQFMNKKIVTCRKNDSLKFVSSLMNKNQVSRVIVTDENGNPIGLISTNTLL 185



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 46/130 (35%), Gaps = 15/130 (11%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII------------TEGD 271
                 I   +    L    +++++ +   V V DE     G+I            T G 
Sbjct: 136 QFMNKKIVTCRKNDSLKFVSSLMNKNQVSRVIVTDENGNPIGLISTNTLLIHSDYFTNGK 195

Query: 272 IFRN---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                     +   + V D++      + E+  L +A   + ++ I  + V++     +G
Sbjct: 196 TRSRDYLLPVNKEKMIVGDLLTDELVTVNEEDDLAMAASKMIKNQIGGIPVINSNHNLVG 255

Query: 329 IVHFLDLLRF 338
           IV   D++R 
Sbjct: 256 IVSKTDVVRA 265



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 22/44 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V     L  A + + + + G + V++    L GI+++ D+ R F
Sbjct: 223 VNEEDDLAMAASKMIKNQIGGIPVINSNHNLVGIVSKTDVVRAF 266


>gi|167589432|ref|ZP_02381820.1| CBS domain containing protein [Burkholderia ubonensis Bu]
          Length = 143

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  +++    G + V D   +L G++T+ D+  R          
Sbjct: 8   MSKDVVRVAPTDTIRHAAQLMARYDIGALPVCD-HNRLVGMLTDRDLAVRAVSAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +V    P     +D  L    + +    +  + VVD  ++ +G++   D+
Sbjct: 67  RVREVAS-GPIEWCFDDDSLDEIQRYMADAQLHRIPVVDHDRRLVGMLSLGDI 118



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M K+   +     +  A QL+ +++I  L V D   + +G++   DL
Sbjct: 4   VNEIMSKDVVRVAPTDTIRHAAQLMARYDIGALPVCDH-NRLVGMLTDRDL 53


>gi|326796824|ref|YP_004314644.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
 gi|326547588|gb|ADZ92808.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
          Length = 139

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 13/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           +K    L  A  +++EK    + VVD   +  G++T+ +  ++              K  
Sbjct: 15  IKETDSLATAKELMAEKNIRNLPVVDNDGQCLGMLTQREYLKHAFYLVSQFGTQLLSKKE 74

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V++ M  +   +  DT L +A Q    +    L VVD+  K +GI+  +D ++ 
Sbjct: 75  AQTPVKNAMNTDILTLTPDTDLDIAAQFFISNKYGSLPVVDND-KLVGILTPVDFVKL 131



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V D+MI +   I E   L  A +L+ + NI  L VVD+  + +G++   + L+
Sbjct: 2   KKVVDLMITDLVTIKETDSLATAKELMAEKNIRNLPVVDNDGQCLGMLTQREYLK 56


>gi|301063184|ref|ZP_07203736.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300442726|gb|EFK06939.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 216

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/165 (16%), Positives = 63/165 (38%), Gaps = 26/165 (15%)

Query: 198 NFSENDFYVLH---PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           + +  DF  L+       +  L             +  V+ G PL +    ++ +    V
Sbjct: 33  DITPGDFRALYAIAHRHAITRLATSVKAGDVMTRDVVFVEKGTPLAEVADRMAREGVSGV 92

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKD----------------------LNTLSVEDVMIKN 292
            V+ + QK+ G+I+E D       +                      +   + E +M + 
Sbjct: 93  PVI-QDQKVVGVISEKDFVFAMGGEALRSFMAVVAHCLGNKGCAALPMRHQAAEHIMTQP 151

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              +  +T L+    ++ ++N++ + VVD   K +GI+   D+++
Sbjct: 152 ALTVSMETPLSKVANIMAENNLNRVPVVDSEGKLLGIIARADIVQ 196


>gi|239909215|ref|YP_002955957.1| hypothetical protein DMR_45800 [Desulfovibrio magneticus RS-1]
 gi|239799082|dbj|BAH78071.1| hypothetical protein [Desulfovibrio magneticus RS-1]
          Length = 256

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 41/123 (33%), Gaps = 3/123 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +                +    P+  A+  + E   G V  V    K  GI TE D  R 
Sbjct: 128 MVENVDCRAVMRPEPICLPPEAPVQAALDRMREAGVGSVLAV-TDGKAAGIFTERDALRA 186

Query: 276 FHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  L   V   M +    +  + ++   +  +RQ  +  L V +   +  G++   
Sbjct: 187 IMGQPERLADPVSAYMSRPVVSVPAEAMVYKVILYMRQKGVRRLAVTEADGRLAGVLTQP 246

Query: 334 DLL 336
           D+L
Sbjct: 247 DIL 249



 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE--DVMI 290
           +       +AI  + E++   + V+D G  L G++T+ ++      D    +V+   VM 
Sbjct: 80  ILKDLSANEAIKTMLERKERHLPVIDVGGSLIGVVTDKELVDALAVDFMVENVDCRAVMR 139

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P  +  +  +  A+  +R+  +  ++ V D  KA GI    D LR 
Sbjct: 140 PEPICLPPEAPVQAALDRMREAGVGSVLAVTD-GKAAGIFTERDALRA 186



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 49/123 (39%), Gaps = 3/123 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +    V        +V     +  A  ++      C+A V  G K+ G +TE ++ R   
Sbjct: 1   MFKRRVGELAKRPLIVPADATVTQAADLMVRADVSCLAAV-TGAKVVGFVTERELVRRLD 59

Query: 278 KDLN-TLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            DL+    V + + +     IL+D     A++ + +     L V+D     IG+V   +L
Sbjct: 60  VDLDPASPVRETLSRTVGGGILKDLSANEAIKTMLERKERHLPVIDVGGSLIGVVTDKEL 119

Query: 336 LRF 338
           +  
Sbjct: 120 VDA 122


>gi|218781633|ref|YP_002432951.1| hypothetical protein Dalk_3797 [Desulfatibacillum alkenivorans
           AK-01]
 gi|218763017|gb|ACL05483.1| CBS domain containing membrane protein [Desulfatibacillum
           alkenivorans AK-01]
          Length = 213

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 14/121 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              ++  +     L DA  I+   +F  + VVD+  KLKG++TE  + +    +  +L+V
Sbjct: 7   MTANVVTITSDTSLADAKRIMEAHKFQRLPVVDK-GKLKGVVTEKRLEKVSPSEATSLTV 65

Query: 286 EDV------------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +V            M KN   +  +  +   + L + + +  L+V+ +  K IGIV   
Sbjct: 66  WEVGYLLEKTPVSKIMAKNVVTVTPEMTVEEGLALAQTNKVGALVVI-EAGKVIGIVTTN 124

Query: 334 D 334
           D
Sbjct: 125 D 125



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+DVM  N   I  DT L  A +++  H    L VVD   K  G+V 
Sbjct: 3   VKDVMTANVVTITSDTSLADAKRIMEAHKFQRLPVVDK-GKLKGVVT 48


>gi|78224657|ref|YP_386404.1| Cl- channel, voltage gated [Geobacter metallireducens GS-15]
 gi|78195912|gb|ABB33679.1| Cl- channel, voltage gated [Geobacter metallireducens GS-15]
          Length = 613

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/131 (19%), Positives = 50/131 (38%), Gaps = 3/131 (2%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G+  T+               ++     + + +      R     +VD G  L G++T  
Sbjct: 471 GREETILEKIQVRGVMMHDAEVLPESMTIREFLERAHTPRQHTFPLVDAGGGLAGVVTIH 530

Query: 271 D-IFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAI 327
           D +   F  D L+ + + ++   +   +  D  L  A++ +    I  L VVD    K I
Sbjct: 531 DFLGVAFEPDILDKVPLGEMATDDVITVQGDESLAAALRKMDLTPIEELPVVDSGNGKVI 590

Query: 328 GIVHFLDLLRF 338
           GI+   +++  
Sbjct: 591 GILSRREVIAA 601


>gi|127510986|ref|YP_001092183.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
 gi|126636281|gb|ABO21924.1| cyclic nucleotide-binding protein [Shewanella loihica PV-4]
          Length = 629

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 55/123 (44%), Gaps = 12/123 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
               P++  G  +  A  +++++    + V+D         +   L GIIT+ D+  R  
Sbjct: 157 TRDAPVIHKGESIQQAAIMMAQENVSALLVIDPDVLEDEDGDTSPLLGIITDRDLCTRVV 216

Query: 277 HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + ++  + +  V+      +  +  +  AM  + ++N+  L V    +K IGI+   D+
Sbjct: 217 AEGIDPATELAGVVSTEVITLDHNAYVYEAMLTMLRYNVHHLPVC-KGRKPIGIIEATDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD---------DCQKAI 327
             DL T  V+ ++ ++  VI +   +  A  ++ Q N+S L+V+D         D    +
Sbjct: 144 QNDLTTSKVKTLLTRDAPVIHKGESIQQAAIMMAQENVSALLVIDPDVLEDEDGDTSPLL 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|325686381|gb|EGD28411.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK72]
          Length = 282

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSFWENQKLNGYYR 277

Query: 219 CASD 222
             + 
Sbjct: 278 RNTH 281


>gi|325570437|ref|ZP_08146214.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus ATCC 12755]
 gi|325156647|gb|EGC68824.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus ATCC 12755]
          Length = 260

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/192 (18%), Positives = 72/192 (37%), Gaps = 3/192 (1%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F  FK   +   +L + S+ Q +L      K+ +  L +SL       F  AVE ++  +
Sbjct: 64  FQEFKFSLKNYQTLERKSSTQASLGLSPLIKQMIDQLTTSLSMIEEADFQRAVEMLQQAQ 123

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R+    +G+S  +    +  L   G         +        +++ D+ I +S SG +
Sbjct: 124 -RIEFFALGQSAPVALSASRKLRFLGKTVGASTDWDELTTIANQLSKKDMAIFISHSGET 182

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
             +       ++  +P++A   ++ S +   A    +   E  +  H     +  I   A
Sbjct: 183 IGMLNYANRLKQRGVPILACIGQSTSTLEKLA--TFSFSVEMTTIYHHEVDLSPRISLAA 240

Query: 185 IGDALAIALLES 196
           + D L I     
Sbjct: 241 LLDILIIQYANQ 252


>gi|313637859|gb|EFS03190.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria seeligeri FSL S4-171]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD   + +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKENRLVGIVT 357



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|308180115|ref|YP_003924243.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308045606|gb|ADN98149.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 292

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 5/162 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           SSL+ + Q         AVE +   +  +   G+G S             TG P      
Sbjct: 115 SSLDQTSQVMTEADLKRAVELLLNARS-IGFYGLGGSAVAALDGYHKFVRTGIPCAHNSD 173

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +        +   D+ +V+S +G + +   +L      S+P+IA+TS   S +A  + +
Sbjct: 174 YDMQLMQAAQMNASDVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTV 233

Query: 159 V-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             +++ +E      GL   TS I Q++I D+L +      N 
Sbjct: 234 AFISVAEEINYRSEGL---TSLIAQMSIIDSLFLMTAVHGNI 272


>gi|289434712|ref|YP_003464584.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
 gi|289170956|emb|CBH27498.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria seeligeri serovar 1/2b str. SLCC3954]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 49/109 (44%), Gaps = 9/109 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I    I      DLN  + 
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTA 308

Query: 286 EDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             VM    KN   + EDTLL   +Q + +     + VVD   + +GIV 
Sbjct: 309 TSVMDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKENRLVGIVT 357



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|123442626|ref|YP_001006603.1| DNA-binding transcriptional regulator HexR [Yersinia enterocolitica
           subsp. enterocolitica 8081]
 gi|122089587|emb|CAL12436.1| hex regulon repressor [Yersinia enterocolitica subsp.
           enterocolitica 8081]
          Length = 289

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +              +  D
Sbjct: 119 NRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGD 177

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  + + AR     +IAITS   + +A  A + L L    ++  +  
Sbjct: 178 VVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLAHEATLPLLLDVPEDTDMY-- 234

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
            P  S I QL + D LA      R     D
Sbjct: 235 MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|254786600|ref|YP_003074029.1| inosine-5'-monophosphate dehydrogenase [Teredinibacter turnerae
           T7901]
 gi|237683882|gb|ACR11146.1| inosine-5'-monophosphate dehydrogenase [Teredinibacter turnerae
           T7901]
          Length = 491

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M      +LAIAL E          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEASLAIALAEEGGIG-----IIHKSMSIKQQAKAVRAVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + + I +  + +   V V+ E   L GI+T  D+   F  +L   +V  +
Sbjct: 96  DPITIEASATINELIALTGKHKISGVPVL-ESGNLVGIVTGRDVR--FESNL-DATVASI 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E    T    LL ++ I  ++VV+D     G++   D+ + 
Sbjct: 152 MTPKEKLVTVKEGADPTEVKALLHKNRIEKVLVVNDNFDLRGLITVKDMNKA 203


>gi|261340239|ref|ZP_05968097.1| transcriptional regulator HexR [Enterobacter cancerogenus ATCC
           35316]
 gi|288317324|gb|EFC56262.1| transcriptional regulator HexR [Enterobacter cancerogenus ATCC
           35316]
          Length = 289

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            +++L+   Q       + AV+ +   K R+   G+G S  +     +       P  + 
Sbjct: 102 AMATLDHVRQSLEMASVNRAVDLLTQAK-RIAFFGLGSSAAVAHDAMNKFFRFNVPVIYS 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                        + DD+++++S +G +     +   AR     +IA+T+   + +A  A
Sbjct: 161 DDIVLQRMSCMNCSEDDVVVLISHTGRTKSQVELAQLARENDAMVIALTT-AGTPLAREA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +TL    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLAITLDVPEDTDMY--MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 264


>gi|157693374|ref|YP_001487836.1| acetoin dehydrogenase AcuB [Bacillus pumilus SAFR-032]
 gi|157682132|gb|ABV63276.1| acetoin dehydrogenase AcuB [Bacillus pumilus SAFR-032]
          Length = 213

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLNTL----SV 285
           +    + +AI  +S      + +V +   + G++T+ DI       F  +   L     V
Sbjct: 15  RKTDTIEEAIKKMSTHHIRHIPIVSDQGSVIGMVTDRDIKNASPSIFETEKRQLFIQRPV 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E++M+           +     +  +H I  L VV    K +GI+   DLLR
Sbjct: 75  EEIMVLETITAHPLDFVEEISSVFFEHGIGCLPVV-RRGKLVGIITKTDLLR 125



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 27/53 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +E +M ++   + +   +  A++ +  H+I  + +V D    IG+V   D+
Sbjct: 1   MMIEQIMERDVITLRKTDTIEEAIKKMSTHHIRHIPIVSDQGSVIGMVTDRDI 53


>gi|152987538|ref|YP_001347327.1| DNA-binding transcriptional regulator HexR [Pseudomonas aeruginosa
           PA7]
 gi|150962696|gb|ABR84721.1| probable transcriptional regulator [Pseudomonas aeruginosa PA7]
          Length = 285

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ +         AV+ +   + ++   G+G S  +                   
Sbjct: 104 IASLDSAHKLLDPRAIDRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAQA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +V+S++G + EL  + + AR     ++ +T+   S +A  + 
Sbjct: 163 DVLMQRMIASVAHTGDLFVVISYTGRTRELVEVAHLARENGASVLGLTA-AGSPLARAST 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 LCLDIPLPEDTDIY--MPMTSRIIQLTVLDVLATGVTLRRG 260


>gi|289596412|ref|YP_003483108.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
 gi|289534199|gb|ADD08546.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
          Length = 290

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 5/118 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                + S + I +   G    D +  L +     V V++E  K  GI++     R+  +
Sbjct: 7   TKVSDIMSRNPICVKAPGTK-KDVLKTLVKYNITGVPVINEEGKFLGIVS----RRDIFE 61

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +     +  +M ++   + ED  +  A  ++ ++    ++VVDD +  IG++   D L
Sbjct: 62  NPGEEQIAILMRRDVPTVKEDDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFL 119



 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 41/174 (23%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  DF  +     +    +      +       + +  PL      +S        VVD
Sbjct: 113 ITPQDFLEV-----IEERKISEPVEKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVD 167

Query: 259 EGQKLKGIITEGDIFRNFHKD------------------------------------LNT 282
           +  KLKGI+T+ D+F     D                                    L  
Sbjct: 168 DDGKLKGIVTDRDLFEKAEVDKSVAISELGLGDDEDSWTWEGLRNVIKLFYMEEKVTLPK 227

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + VE  MIK+P  I   + +  A +++R++N S L V +     I +++  DL+
Sbjct: 228 IPVEKAMIKDPVTIFSKSPIWEAAKIMRKNNFSQLPVRNTHDDLIAMIYDSDLV 281



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              V D+M +NP  +         ++ L ++NI+ + V+++  K +GIV   D+
Sbjct: 6   KTKVSDIMSRNPICVKAPGTKKDVLKTLVKYNITGVPVINEEGKFLGIVSRRDI 59



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +P VK    +  A +++       + VVD+ + + G+IT  D      +   +  V
Sbjct: 72  MRRDVPTVKEDDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFLEVIEERKISEPV 131

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E  + K    +   T L V    +   ++    VVDD  K  GIV   DL
Sbjct: 132 EKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVDDDGKLKGIVTDRDL 181


>gi|255654950|ref|ZP_05400359.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Clostridium difficile QCD-23m63]
 gi|296449697|ref|ZP_06891467.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Clostridium difficile NAP08]
 gi|296877986|ref|ZP_06902005.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Clostridium difficile NAP07]
 gi|296261421|gb|EFH08246.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Clostridium difficile NAP08]
 gi|296431054|gb|EFH16882.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Clostridium difficile NAP07]
          Length = 378

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--EDVMI 290
           V     +   I I+   +   + ++D  + LKGI+T  D+     KD++  S+   D+M 
Sbjct: 262 VNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM-----KDVDDKSILLADIMS 316

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             P  + E   L   + ++ ++++  + V+ D  K +G++    LL
Sbjct: 317 SEPLHVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLL 362



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+MIKNP  +     +T  ++++R   +  L+++D  +   GIV   D+
Sbjct: 250 KARDIMIKNPIAVNSTRTVTQGIEIMRTSKVDSLLIIDRAKTLKGIVTVKDM 301



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            V  G  L++ + +++    G + V+ +  KL G+IT   +     +    + V 
Sbjct: 321 HVNEGDNLVEILNVMNRNSVGYIPVISDENKLVGLITRSSLLSVLSEQFLEMEVS 375


>gi|110834107|ref|YP_692966.1| CBS domain-containing protein [Alcanivorax borkumensis SK2]
 gi|110647218|emb|CAL16694.1| CBS domain protein, putative [Alcanivorax borkumensis SK2]
          Length = 136

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 44/109 (40%), Gaps = 5/109 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTL---SVEDVM 289
                + +AI  L E +     VV+E   + G+ +E D  +       +     SV++ M
Sbjct: 19  SPDMSVSEAIRTLLENQISGGPVVNEAGSVVGVFSESDCLKGALEASYHDTEIGSVKEYM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + + +     +    ++    +   L V+D+  K +G +   DLLR 
Sbjct: 79  SVDLQTVEGSDSILDVAEIFLADHRRRLPVMDN-GKLVGQISRRDLLRA 126



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 28/58 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L ++ V + M +       D  ++ A++ L ++ IS   VV++    +G+    D L+
Sbjct: 2   LKSMRVAEYMSRRLITFSPDMSVSEAIRTLLENQISGGPVVNEAGSVVGVFSESDCLK 59


>gi|307286674|ref|ZP_07566760.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0109]
 gi|306502152|gb|EFM71436.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX0109]
 gi|315165060|gb|EFU09077.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecalis TX1302]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 265 ITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI---DVETLDQQRGKASSVGDILNKD 321

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD+ ++ +GI+ 
Sbjct: 322 VFFVQKTALLRDALQRILKRGLKYVPVVDEQKRVVGILT 360



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 243 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI 299


>gi|258653823|ref|YP_003202979.1| CBS domain containing membrane protein [Nakamurella multipartita
           DSM 44233]
 gi|258557048|gb|ACV79990.1| CBS domain containing membrane protein [Nakamurella multipartita
           DSM 44233]
          Length = 377

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 2/122 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  V+    +     I+S      V VVDE + + GI T  D+FR
Sbjct: 237 RRLGRLRVESVMTREVKTVQPTENMYRVRMIMSNDLVKAVPVVDEDRHVVGITTIYDLFR 296

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               +L+   V   M    + I     +   + L+    +  + VVD+  +  GIV   +
Sbjct: 297 LDLVNLD--PVSKYMTSPVRTIRGSAPVAELVALMSGEGLRHIPVVDEVGRLQGIVSRTE 354

Query: 335 LL 336
           L+
Sbjct: 355 LI 356



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/67 (22%), Positives = 28/67 (41%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              + L  L VE VM +  K +     +     ++    +  + VVD+ +  +GI    D
Sbjct: 234 AMDRRLGRLRVESVMTREVKTVQPTENMYRVRMIMSNDLVKAVPVVDEDRHVVGITTIYD 293

Query: 335 LLRFGII 341
           L R  ++
Sbjct: 294 LFRLDLV 300



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/61 (18%), Positives = 30/61 (49%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
            +    +  ++   P+ + + ++S +    + VVDE  +L+GI++  ++    H+ L   
Sbjct: 307 KYMTSPVRTIRGSAPVAELVALMSGEGLRHIPVVDEVGRLQGIVSRTELIAVLHRALVDA 366

Query: 284 S 284
           +
Sbjct: 367 T 367


>gi|90408437|ref|ZP_01216598.1| hypothetical protein PCNPT3_09399 [Psychromonas sp. CNPT3]
 gi|90310471|gb|EAS38595.1| hypothetical protein PCNPT3_09399 [Psychromonas sp. CNPT3]
          Length = 614

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 46/127 (36%), Gaps = 6/127 (4%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +       +    S D   LV     +      +  K   C  V+ E   L GI+T  D
Sbjct: 145 DINNSSFFNTVDQVSKDPFTLVNSEDCIQQVAKEMRIKDSNCAMVM-ENNNLVGIVTNSD 203

Query: 272 I--FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIG 328
           I            L+V ++M  +P  I     +   A+ +++ + I  L +++     +G
Sbjct: 204 IIERVIVQGKSTNLAVREIMSPSPISINGQQTVFDGAISMMQSN-IKNLPIIEK-GCPVG 261

Query: 329 IVHFLDL 335
           ++    L
Sbjct: 262 LLSLHQL 268


>gi|83721529|ref|YP_443158.1| SIS domain-containing protein [Burkholderia thailandensis E264]
 gi|167620326|ref|ZP_02388957.1| SIS domain protein [Burkholderia thailandensis Bt4]
 gi|257139388|ref|ZP_05587650.1| SIS domain-containing protein [Burkholderia thailandensis E264]
 gi|83655354|gb|ABC39417.1| SIS domain protein [Burkholderia thailandensis E264]
          Length = 293

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQVRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVITDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|83591230|ref|YP_431239.1| putative manganese-dependent inorganic pyrophosphatase [Moorella
           thermoacetica ATCC 39073]
 gi|83574144|gb|ABC20696.1| Inorganic diphosphatase [Moorella thermoacetica ATCC 39073]
          Length = 436

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 47/112 (41%), Gaps = 7/112 (6%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN------TLSV 285
            ++ G  +  A   + +     +AVVDE + L G+ T GD+ R   +  +         V
Sbjct: 80  FIQPGATVRQAGIFMRQHGVKTLAVVDENRHLLGLFTVGDLARLLLEAWDTGNVPMDEPV 139

Query: 286 EDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VM   N  +  +D L+T   + + +       VVDD    +G++    LL
Sbjct: 140 YKVMQSDNLVIFNQDDLITEVRRTMLETRYRNYPVVDDNHCLVGLIARYHLL 191



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 25/57 (43%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V+DV+      I     +  A   +RQH +  L VVD+ +  +G+    DL R 
Sbjct: 67  RARVKDVLDGGLLFIQPGATVRQAGIFMRQHGVKTLAVVDENRHLLGLFTVGDLARL 123


>gi|315127811|ref|YP_004069814.1| hypothetical protein PSM_A2750 [Pseudoalteromonas sp. SM9913]
 gi|315016325|gb|ADT69663.1| conserved hypothetical protein [Pseudoalteromonas sp. SM9913]
          Length = 847

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +I +V     + DA++++ E     + V +E +   GIIT+ D+ +   +  N L   
Sbjct: 149 NKNIRIVPSSLAINDAVSMMREYAEKVILVFNEDENAHGIITQRDLLKLITEQHNHLVCW 208

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D+  +    I     L  A +L+ + NI  L VV +  +  G++   +L+
Sbjct: 209 DLASRPLYQISPQDSLFDAYRLMSESNIRHL-VVSENNQINGVLSLENLI 257



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 45/106 (42%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
                PLI+A+ ++       + V  + Q++ G+ TE D       ++ L  L++E VM 
Sbjct: 26  CAKDTPLIEAVKLMRAHNVSAIFVK-QQQQIIGVWTETDCLTLNFSNRSLRQLAIESVMS 84

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                +    LLT    +  +  +  L+V D      G++   D++
Sbjct: 85  SPVLSVPSQQLLTETAMVFNKQGVRHLLVTDTNDIPSGVISITDIV 130



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           V     L +   + +++    + V D      G+I+  DI  N      L    + D   
Sbjct: 90  VPSQQLLTETAMVFNKQGVRHLLVTDTNDIPSGVISITDIVNNQGLEHYLQFRPINDQYN 149

Query: 291 KNPKVILEDTLLT-VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           KN   I+  +L    A+ ++R++   V++V ++ + A GI+   DLL+ 
Sbjct: 150 KN-IRIVPSSLAINDAVSMMREYAEKVILVFNEDENAHGIITQRDLLKL 197



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV         +DT L  A++L+R HN+S + V    Q+ IG+    D L
Sbjct: 13  QKVCDVFTNKVIACAKDTPLIEAVKLMRAHNVSAIFV-KQQQQIIGVWTETDCL 65


>gi|313633271|gb|EFS00135.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria seeligeri FSL N1-067]
          Length = 397

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD   + +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKENRLVGIVT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|78776385|ref|YP_392700.1| sugar isomerase (SIS) [Sulfurimonas denitrificans DSM 1251]
 gi|78496925|gb|ABB43465.1| Sugar isomerase (SIS) [Sulfurimonas denitrificans DSM 1251]
          Length = 184

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/175 (20%), Positives = 70/175 (40%), Gaps = 24/175 (13%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSG----HIGSKLASTLASTG 90
           K+ +S L  +L+          V+ +   KG++ I G G S     H+ + L + L   G
Sbjct: 6   KQYISKLVDTLKKSDLKSISKIVDALDNAKGKIYIIGNGGSAATASHMVNDLGAGLRRRG 65

Query: 91  TPSFFVHA-------AEASHGDLG-----------MITRDDLIIVLSWSGSSDELKAILY 132
             SF V +         A   D+G            +  +D++I +S SG+S  +   + 
Sbjct: 66  IKSFDVESLSDNTPVCSALANDIGYKNIFYMQLKDRLKPEDILIAISCSGNSKNITKAVK 125

Query: 133 YARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           YA++    +I IT  +   +   +D  +    E ++  +G+      ++   I  
Sbjct: 126 YAKKIGSKIIGITGFDGGKLKKRSD--INFHVETDAGEYGIVEDMHMVLNHIIYS 178


>gi|258652022|ref|YP_003201178.1| signal transduction protein with CBS domains [Nakamurella
           multipartita DSM 44233]
 gi|258555247|gb|ACV78189.1| putative signal transduction protein with CBS domains [Nakamurella
           multipartita DSM 44233]
          Length = 202

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 15/109 (13%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIF------------RNFHKDLNTLSVEDVMIK 291
            +L    F  + VV+    L GI+TE D+             R+     + L V DVM  
Sbjct: 26  RLLCAHGFTALPVVEGDG-LVGIVTEADLIDDPGGSLHPRPGRH-EAASSELLVRDVMSA 83

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             + + +   +     ++ +  I  L VVD   + IGIV   DLLR G+
Sbjct: 84  PVRSLTKTADVADTAAMMVRDRIRSLPVVD-GGRVIGIVTRRDLLRAGL 131



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 16/81 (19%), Positives = 30/81 (37%), Gaps = 2/81 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            PG             + S     L K    + D   ++   R   + VVD G ++ GI+
Sbjct: 64  RPGRHEAASSELLVRDVMSAPVRSLTK-TADVADTAAMMVRDRIRSLPVVD-GGRVIGIV 121

Query: 268 TEGDIFRNFHKDLNTLSVEDV 288
           T  D+ R     ++    +++
Sbjct: 122 TRRDLLRAGLAHIDQDLADEI 142


>gi|291295680|ref|YP_003507078.1| hypothetical protein Mrub_1296 [Meiothermus ruber DSM 1279]
 gi|290470639|gb|ADD28058.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Meiothermus ruber DSM 1279]
          Length = 601

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 19/107 (17%), Positives = 40/107 (37%), Gaps = 6/107 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLS 284
                 +     + +A   + E +   + V        GI+T+ D+  R   +       
Sbjct: 153 TRPPVFIARNATVQEAAKAMREHQISSILV---EGSPLGILTDRDLRNRVLAEGKGPETP 209

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + DVM    K++   T L  A+  + +  I  L  ++   + +G+V 
Sbjct: 210 LADVMSAPAKILPASTPLFEALTFMVRQGIHHLP-LEQDGRIVGVVT 255



 Score = 49.9 bits (118), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +L V +++ + P  I  +  +  A + +R+H IS ++V       +GI+   DL
Sbjct: 145 SLPVGELITRPPVFIARNATVQEAAKAMREHQISSILV---EGSPLGILTDRDL 195


>gi|163731383|ref|ZP_02138830.1| CBS domain protein [Roseobacter litoralis Och 149]
 gi|161394837|gb|EDQ19159.1| CBS domain protein [Roseobacter litoralis Och 149]
          Length = 144

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/120 (19%), Positives = 49/120 (40%), Gaps = 4/120 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLN 281
                +  V     + +A  ILS+K  G V V   G+ + GI++E DI R          
Sbjct: 10  KQQHDVVTVPPTMNISEAARILSDKGIGTVVVSSNGKVVDGILSERDIVREIGARGAGCL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + +V  +M        +D      ++ + +     + VV++     G++   D+++  ++
Sbjct: 70  SHTVASLMTSKIVTCKKDDEADAILKQMTEGRFRHMPVVEE-GALQGLISLGDVVKARLM 128


>gi|327296325|ref|XP_003232857.1| IMP dehydrogenase [Trichophyton rubrum CBS 118892]
 gi|326465168|gb|EGD90621.1| IMP dehydrogenase [Trichophyton rubrum CBS 118892]
          Length = 551

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 44/229 (19%), Positives = 79/229 (34%), Gaps = 27/229 (11%)

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVA-----CHADIVLTLPKEPESCPHGLAP 175
           SG   ++  +L   +R      A+T  +  V+        +D+ L  P       +   P
Sbjct: 39  SGDGLDINELLDSNKRG-----ALTYNDFLVLPGYIGFPASDVTLQSPVTKRISLN--VP 91

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDSIP 231
             S+ M      ++AI +            V+H              V            
Sbjct: 92  LLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSAEEQAEMVRKVKRYENGFILDPV 146

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++     + +   +  +  FG   V + G    KL GI+T  DI   FH +L+   V  V
Sbjct: 147 VISPKTTVAEVKDLKQKWGFGGFPVTENGDLRSKLVGIVTSRDI--QFHPELSD-PVTAV 203

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +       T L    ++LR      L +VD+    + ++   DL++
Sbjct: 204 MTTDLVTAPSGTTLAETNEVLRASKKGKLPIVDEAGNIVSLLSRSDLMK 252


>gi|282861533|ref|ZP_06270597.1| CBS domain containing protein [Streptomyces sp. ACTE]
 gi|282563349|gb|EFB68887.1| CBS domain containing protein [Streptomyces sp. ACTE]
          Length = 141

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 48/117 (41%), Gaps = 6/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIF---RNFHKDL 280
                  +     L  A  ++ + + G + V    E  ++ GI+T+ DI         D 
Sbjct: 8   MSTGAQWIPAHETLDRAAQMMRDHKVGALPVSANGEQDRMVGIVTDRDIVIKCVAAGHDP 67

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++  D+    P+ I     +   +  ++ H I  L VV + +K IG++   DL R
Sbjct: 68  SKVTAGDLCDGTPRWIDATAEVEAVLDEMQSHRIRRLPVV-EDKKLIGMISEADLAR 123



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
            + +D+M    + I     L  A Q++R H +  L V    +  + +GIV   D++
Sbjct: 2   TTAKDIMSTGAQWIPAHETLDRAAQMMRDHKVGALPVSANGEQDRMVGIVTDRDIV 57



 Score = 36.4 bits (83), Expect = 5.9,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
              +   +     +   +  +   R   + VV E +KL G+I+E D+ R+ 
Sbjct: 76  CDGTPRWIDATAEVEAVLDEMQSHRIRRLPVV-EDKKLIGMISEADLARHL 125


>gi|307244348|ref|ZP_07526461.1| inosine 5-monophosphate dehydrogenase [Peptostreptococcus stomatis
           DSM 17678]
 gi|306492249|gb|EFM64289.1| inosine 5-monophosphate dehydrogenase [Peptostreptococcus stomatis
           DSM 17678]
          Length = 499

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 65/185 (35%), Gaps = 17/185 (9%)

Query: 155 HADIVLTLPKEPESCPHGLA-----PTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P          A     P  SAIMQ    D +AIAL +     F      + 
Sbjct: 28  PANVSLETPVVKFKKGEEPAIKMNIPLVSAIMQSVSDDKMAIALAKEGGISFIYGSQSIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
                +  + +  +  + S  ++        L D + +  +     VA+ D+     KL 
Sbjct: 88  SQAAMVARVKMHKAGFVVSDSNLT---PDNTLADILALKEKTGHSTVAITDDGTANGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+   D      +      V D M          +D  L  A  ++  + ++ L +VD+
Sbjct: 145 GIVASRDYR--VSRMSPDTKVADFMTPLEQIVSAPKDVTLKEANNIIWDNKLNSLPIVDE 202

Query: 323 CQKAI 327
             K +
Sbjct: 203 EGKLV 207


>gi|295695444|ref|YP_003588682.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
 gi|295411046|gb|ADG05538.1| putative signal transduction protein with CBS domains [Bacillus
           tusciae DSM 2912]
          Length = 210

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 54/135 (40%), Gaps = 10/135 (7%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FYV  P G++    +    V        +V  G  + DAI  +  +  G + VV +   L
Sbjct: 56  FYVGKPMGEVIADQLRKMKVKDYKSVPVVVSEGTSVYDAIVTMFLEDVGTLFVVRDQAVL 115

Query: 264 KGIITEGDIFRNF--HKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ +     +D+  + V   M + P   V+  +  +  A   L  + I  L V
Sbjct: 116 AGVVSRKDLLKVAIGAQDVREVPVGLAMTRMPNIIVVTPEENVYEAATKLIDYQIDALPV 175

Query: 320 V---DDCQK---AIG 328
           V   D   K    +G
Sbjct: 176 VRVMDAHNKQLEVVG 190



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L  + V+D     P V+ E T +  A+  +   ++  L VV D     G+V   DL
Sbjct: 66  IADQLRKMKVKDYKSV-PVVVSEGTSVYDAIVTMFLEDVGTLFVVRDQAVLAGVVSRKDL 124

Query: 336 LRFGI 340
           L+  I
Sbjct: 125 LKVAI 129


>gi|221198734|ref|ZP_03571779.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
 gi|221204996|ref|ZP_03578012.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221211935|ref|ZP_03584913.1| CBS domain containing protein [Burkholderia multivorans CGD1]
 gi|221168020|gb|EEE00489.1| CBS domain containing protein [Burkholderia multivorans CGD1]
 gi|221174787|gb|EEE07218.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221181185|gb|EEE13587.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
          Length = 141

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L DA  ++ +   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQTLRDAAKLMDDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S+E V+        ED  +    + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  SIEGVVSGPANWCYEDDDIAEVQKKMEDAQIRRVPVVDREKRLVGIVALGDL 118



 Score = 53.4 bits (127), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DVM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 2   TKVADVMTRDAATIGPTQTLRDAAKLMDDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|118594838|ref|ZP_01552185.1| SIS domain protein [Methylophilales bacterium HTCC2181]
 gi|118440616|gb|EAV47243.1| SIS domain protein [Methylophilales bacterium HTCC2181]
          Length = 178

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 60/154 (38%), Gaps = 7/154 (4%)

Query: 57  VEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLII 116
           ++++    GR+ + G G+S  +    A  L   G                  I   DL+I
Sbjct: 26  LKQLIEESGRIFVGGAGRSLLVARFFAMRLVHCGYQVNMPGEIVTP-----AIVPGDLLI 80

Query: 117 VLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT 176
           V+S SG +  L  +L  A+     +I I+ +  S ++  AD  + +  +         P 
Sbjct: 81  VISGSGGTKTLLPMLETAKAKGAKIIVISMKASSAMSDLADYTVQVGNDNSFPLTKGLPM 140

Query: 177 TSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +A     L   +A+   ++  ++ +E     +H
Sbjct: 141 GTAFELSTLVYLEAVIGEIVFDKDLTEEGMRAIH 174


>gi|289191815|ref|YP_003457756.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
 gi|288938265|gb|ADC69020.1| CBS domain containing protein [Methanocaldococcus sp. FS406-22]
          Length = 167

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 45/112 (40%), Gaps = 9/112 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + +    + +     + VVD+   + G IT  +I +        L+V +VM+KNP 
Sbjct: 38  PEKTIGEIFDEMIKYNISGMPVVDDRGVMIGFITLREIRKYMMSHPY-LNVGEVMLKNPP 96

Query: 295 VILEDTLLTVAMQLLRQ--HNISVLMVVDDC------QKAIGIVHFLDLLRF 338
               D  +  A + + +    +  L V++         K  GI+   D+++ 
Sbjct: 97  YTTADEDIITAFEKMIEFDKKLDQLPVINTKYPEKILGKLEGIIFMEDIIKL 148



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 16/70 (22%), Positives = 33/70 (47%), Gaps = 3/70 (4%)

Query: 272 IFRNFHK--DLNTLSVEDVM-IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + R  +K  +L  + V+DVM   +      +  +      + ++NIS + VVDD    IG
Sbjct: 9   LVRTLNKYKELQKVRVKDVMVSGDVITTTPEKTIGEIFDEMIKYNISGMPVVDDRGVMIG 68

Query: 329 IVHFLDLLRF 338
            +   ++ ++
Sbjct: 69  FITLREIRKY 78


>gi|260769040|ref|ZP_05877974.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           furnissii CIP 102972]
 gi|260617070|gb|EEX42255.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           furnissii CIP 102972]
 gi|315180780|gb|ADT87694.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           furnissii NCTC 11218]
          Length = 138

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 7/110 (6%)

Query: 234 KIGCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDV 288
           K    +  A+  +++    G   V+D+ +++ G ++E D+     K      +T  V D 
Sbjct: 18  KPDMSMSAALERVMNSNHLGG-PVIDDQERVIGFLSEQDLLEKLIKVSYHCQDTHIVSDC 76

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M +    +  +  +    ++++     V  VVD+  K +GI+   D+L+ 
Sbjct: 77  MHQEVLSVSPEMSIIELAEMMKVGKPKVYPVVDE-GKLVGIITRRDVLQA 125



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQ-LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V D M         D  ++ A++ ++  +++    V+DD ++ IG +   DLL
Sbjct: 1   MDSLKVRDYMTVKAVTFKPDMSMSAALERVMNSNHLGG-PVIDDQERVIGFLSEQDLL 57



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            SD MH       V     +I+   ++   +     VVDE  KL GIIT  D+ +   K 
Sbjct: 73  VSDCMHQEVLS--VSPEMSIIELAEMMKVGKPKVYPVVDE-GKLVGIITRRDVLQAIGKY 129

Query: 280 LNT 282
           L+ 
Sbjct: 130 LSA 132


>gi|225562689|gb|EEH10968.1| inosine-5'-monophosphate dehydrogenase [Ajellomyces capsulatus
           G186AR]
          Length = 549

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/193 (20%), Positives = 65/193 (33%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLH 208
           +D+ L  P          AP  S+ M      ++AI +       +   N S  D     
Sbjct: 72  SDVSLETPVTRRITL--KAPLLSSPMDTVTEHSMAIHMALLGGLGVIHHNCSAEDQA--- 126

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
                  +        +     P+V      + +A  +  +  FG   V + G    KL 
Sbjct: 127 ------NMVRKVKRYENGFILEPVVLSPKTTVAEAKALKEKWGFGGFPVTENGTLPSKLI 180

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+IT  DI  +         V  VM  +       T L  A ++LR      L +VD   
Sbjct: 181 GMITSRDIQFH---PTGEDPVTAVMTTDLVTAPSGTTLAEANEVLRSSKKGKLPIVDSEG 237

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 238 NLVSLLSRSDLMK 250


>gi|222111327|ref|YP_002553591.1| signal transduction protein with cbs domains [Acidovorax ebreus
           TPSY]
 gi|221730771|gb|ACM33591.1| putative signal transduction protein with CBS domains [Acidovorax
           ebreus TPSY]
          Length = 151

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/138 (20%), Positives = 52/138 (37%), Gaps = 28/138 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
                  V+   P+ D   +L   R   V V++   +L G++T  D+             
Sbjct: 1   MTPDPVTVQPETPVDDIARLLLAHRINGVPVIEGAGRLIGVVTAEDLIHRGADERLEPRE 60

Query: 274 --------------RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         +  H+D     +  +VM  +   +      +VA +L+  H+++ L 
Sbjct: 61  SVWMENFWVSFLGPKGTHRDKAEGRTAAEVMTTDVHSVAPAMHPSVAARLMVVHHLTSLP 120

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VV +  K IG +  +DLL
Sbjct: 121 VV-EDGKVIGAISRIDLL 137



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 26/51 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M  +P  +  +T +    +LL  H I+ + V++   + IG+V   DL+  G
Sbjct: 1   MTPDPVTVQPETPVDDIARLLLAHRINGVPVIEGAGRLIGVVTAEDLIHRG 51


>gi|297197552|ref|ZP_06914949.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
 gi|197715576|gb|EDY59610.1| CBS domain-containing protein [Streptomyces sviceus ATCC 29083]
          Length = 223

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 49/130 (37%), Gaps = 18/130 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              ++  V       + + ++ + +   + V++   ++ G+++E D+      R+   D 
Sbjct: 1   MTHTVAAVGRKATFKEIVRLMQDWKVSALPVLEGEGRVVGLVSEADLLPKEEFRDSDPDR 60

Query: 281 NTL-------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            T              + E++M         D  L  A + +    +  L VV++     
Sbjct: 61  YTQLRRLSDLAKAGAVTAEELMTSPALTTRPDATLAQAARTMAHSRVKRLPVVNELGMLE 120

Query: 328 GIVHFLDLLR 337
           GIV   DLL+
Sbjct: 121 GIVSRADLLK 130



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 22/46 (47%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +    L  A   ++  R   + VV+E   L+GI++  D+ + F + 
Sbjct: 90  RPDATLAQAARTMAHSRVKRLPVVNELGMLEGIVSRADLLKVFLRG 135


>gi|26992026|ref|NP_747451.1| RpiR family transcriptional regulator [Pseudomonas putida KT2440]
 gi|148550458|ref|YP_001270560.1| RpiR family transcriptional regulator [Pseudomonas putida F1]
 gi|24987161|gb|AAN70915.1|AE016735_8 transcriptional regulator, RpiR family [Pseudomonas putida KT2440]
 gi|148514516|gb|ABQ81376.1| transcriptional regulator, RpiR family [Pseudomonas putida F1]
 gi|313496363|gb|ADR57729.1| RpiR family transcriptional regulator [Pseudomonas putida BIRD-1]
          Length = 288

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L  +       AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREHLDPQ---ALQQAVSAMAQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAVCISQSGRSKDLLITANLVRESGAN 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|317124396|ref|YP_004098508.1| nucleotidyl transferase [Intrasporangium calvum DSM 43043]
 gi|315588484|gb|ADU47781.1| Nucleotidyl transferase [Intrasporangium calvum DSM 43043]
          Length = 355

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 44/106 (41%), Gaps = 1/106 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE-DVMIKN 292
                L DA+ ++         +VD   +L G++T+GD+ R   +  +   +  +    +
Sbjct: 16  PTTATLRDALLVIDRSGTRVCLLVDVRGRLAGLLTDGDLRRAILRGRSLEELAIEHATTS 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  +   +   + + LL   ++S +  V +    +G+    D++  
Sbjct: 76  PHTVTAGSPRALVVDLLTALHVSAVPEVAEDGTLLGLHTLSDVVGA 121


>gi|254254030|ref|ZP_04947347.1| hypothetical protein BDAG_03318 [Burkholderia dolosa AUO158]
 gi|124898675|gb|EAY70518.1| hypothetical protein BDAG_03318 [Burkholderia dolosa AUO158]
          Length = 227

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 45/117 (38%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D G KL  I+T+ D+  R   H      
Sbjct: 92  MSRDVVCVAPTDTIRHAAQLMQRFDIGVLPVCD-GGKLVAIVTDRDLAVRALSHGHSPDT 150

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V     +  +ED  +    Q +    +  + V+D  +  +GIV   D+  R G
Sbjct: 151 PVQAVASAPVQWCIEDDGVGDVQQRMADVQLHRMPVLDRNRHVVGIVSLGDIATRAG 207



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 9/73 (12%)

Query: 271 DIFRN--------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           D  R+          K+     V ++M ++   +     +  A QL+++ +I VL V D 
Sbjct: 66  DCMRHGVCRRVAPLTKEAFMYRVNEIMSRDVVCVAPTDTIRHAAQLMQRFDIGVLPVCD- 124

Query: 323 CQKAIGIVHFLDL 335
             K + IV   DL
Sbjct: 125 GGKLVAIVTDRDL 137


>gi|119960792|ref|YP_949741.1| RpiR family transcriptional regulator [Arthrobacter aurescens TC1]
 gi|119947651|gb|ABM06562.1| putative transcriptional regulator, rpiR family [Arthrobacter
           aurescens TC1]
          Length = 301

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/176 (22%), Positives = 67/176 (38%), Gaps = 6/176 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S      +    E   ++     L  E   Q   AV  + + + +  I G+G  G +G 
Sbjct: 106 DSLQDIVSKIAFNETMSIADTAQVLDVE---QLARAVSAVSSSR-KTDIFGVGAGGLVGQ 161

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +   L   G  SF      A+     ++  D + I +S SG++ +    L   +     
Sbjct: 162 DMQQKLHRIGLTSFSWGDPHAALASAALLDADGVAIAISHSGATMDTIDFLKAGKAAGAV 221

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            IAIT+   S +   ADIVL+        P       S I Q+ I D L + + + 
Sbjct: 222 TIAITNHADSPLGRGADIVLST--AARETPFRPGAMGSRIAQMMIVDCLFVGVAQH 275


>gi|238793294|ref|ZP_04636921.1| Transcriptional regulator, RpiR family [Yersinia intermedia ATCC
           29909]
 gi|238727462|gb|EEQ18989.1| Transcriptional regulator, RpiR family [Yersinia intermedia ATCC
           29909]
          Length = 277

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/164 (21%), Positives = 66/164 (40%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +K  +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAVQTSAE---QLDRAVELLKNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|115358715|ref|YP_775853.1| CBS domain-containing protein [Burkholderia ambifaria AMMD]
 gi|115284003|gb|ABI89519.1| CBS domain containing membrane protein [Burkholderia ambifaria
           AMMD]
          Length = 391

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/65 (32%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ LL +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTLLERHRVKALPVVDGDARLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVAAALTLLERHRVKALPVVDGDARLIGIVTRADLTRQARRPTPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPPSVATVMTRDVASVPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 39.1 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 338 VPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYRQTQMLEAA 391


>gi|258624963|ref|ZP_05719889.1| conserved hypothetical protein [Vibrio mimicus VM603]
 gi|258582742|gb|EEW07565.1| conserved hypothetical protein [Vibrio mimicus VM603]
          Length = 293

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 22  STVQCALRS-IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             ++ A    +   ++ +  +++ L  + + Q   A         ++ + GIG S  + +
Sbjct: 110 QIIEKAKHLFVSTIEQSIGLIDAELVEQCAQQLLKA--------NKIALAGIGASAIVAA 161

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +   L   G    F            ++  +D+++V+S  G++ E+   +  A++    
Sbjct: 162 DINHKLIRAGFNVQFNQDYHIQIVQASLLKAEDVLLVVSARGNTQEVLTAIERAKQNGAQ 221

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +IA+T   +  VA  AD V+      E    G+   T  ++Q+A  D +   L+
Sbjct: 222 VIALTRYGRDKVAQLADYVIPYSYTEEHSQLGMV--TPQLLQMAAFDIVFFKLI 273


>gi|254169303|ref|ZP_04876134.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289595892|ref|YP_003482588.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
 gi|197621724|gb|EDY34308.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|289533679|gb|ADD08026.1| putative signal transduction protein with CBS domains
           [Aciduliprofundum boonei T469]
          Length = 207

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/127 (18%), Positives = 50/127 (39%), Gaps = 4/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
                  +       +  +V     + +   IL +       +++E  K  GI+T+ D +
Sbjct: 24  ARAMKSITVEEVMSRNPRIVSGELTVEEGAKILKDLGI-STLIIEEEGKPVGIVTDRDFV 82

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +   + L  +  + D+M     +I     L  A +++ +  I  L V+ D  K +GI+ 
Sbjct: 83  TKIIAEGLPPSTKLRDIMSTPIIMIPHKENLEDAAKIMTRRKIRKLPVIKDD-KIVGILS 141

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 142 ENDIARI 148



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/61 (24%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +++VE+VM +NP+++  +  +    ++L+   IS L++ ++  K +GIV   D 
Sbjct: 23  MARAMKSITVEEVMSRNPRIVSGELTVEEGAKILKDLGISTLII-EEEGKPVGIVTDRDF 81

Query: 336 L 336
           +
Sbjct: 82  V 82


>gi|167836901|ref|ZP_02463784.1| SIS domain protein [Burkholderia thailandensis MSMB43]
          Length = 293

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVITDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|297520518|ref|ZP_06938904.1| DNA-binding transcriptional regulator HexR [Escherichia coli OP50]
          Length = 172

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/150 (20%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +              +  D
Sbjct: 2   NRAVDLLTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGD 60

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +  
Sbjct: 61  VVVLISHTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY-- 117

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
            P  S + QL + D LA      R     D
Sbjct: 118 MPMVSRLAQLTVIDVLATGFTLRRGAKFRD 147


>gi|326776734|ref|ZP_08235999.1| CBS domain containing protein [Streptomyces cf. griseus XylebKG-1]
 gi|326657067|gb|EGE41913.1| CBS domain containing protein [Streptomyces cf. griseus XylebKG-1]
          Length = 132

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 39/107 (36%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           +     L  A  ++S +R G   V D      GIITE DI        D +  +      
Sbjct: 14  IGPTHTLRQAARLMSARRVGAAVVHDPDTCGLGIITERDILDAVGSGLDPDRETASAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + +       L+V+D     +GIV   D++R
Sbjct: 74  TDVVFAAPAWTLQEAAEAMTHGGFRHLIVLDGDG-PVGIVSVRDIIR 119



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M      I     L  A +L+    +   +V D     +GI+   D+L  
Sbjct: 3   VRDAMSTVVLTIGPTHTLRQAARLMSARRVGAAVVHDPDTCGLGIITERDILDA 56


>gi|167582170|ref|ZP_02375044.1| SIS domain protein [Burkholderia thailandensis TXDOH]
          Length = 293

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQVRSVNKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVITDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|293596538|ref|ZP_05262115.2| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
 gi|293590071|gb|EFF98405.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           J2818]
          Length = 407

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I    I      DLN  + 
Sbjct: 265 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTA 318

Query: 286 EDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             VM    KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 319 TSVMDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 367



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 250 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 306


>gi|125624270|ref|YP_001032753.1| putative HTH-type transcriptional regulator [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|124493078|emb|CAL98042.1| Putative HTH-type transcriptional regulator [Lactococcus lactis
           subsp. cremoris MG1363]
 gi|300071051|gb|ADJ60451.1| putative HTH-type transcriptional regulator [Lactococcus lactis
           subsp. cremoris NZ9000]
          Length = 241

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/127 (23%), Positives = 56/127 (44%), Gaps = 2/127 (1%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEA 101
            S    EL  +     E++      ++  G+G SG+I        A+ G  +  +     
Sbjct: 87  ASHYPSELIEKCRQLTEQVLKADS-IIFFGLGTSGNICEYAMRRFATLGLNALSLTDMTY 145

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR-RFSIPLIAITSENKSVVACHADIVL 160
                 + ++D LI+V S SG + EL  IL + R R  + +I+IT + +S +A  +++ +
Sbjct: 146 PLESHLLESQDSLIVVFSISGETGELIEILQHIRNREKVMIISITPKKESSLAQLSNLSI 205

Query: 161 TLPKEPE 167
               E  
Sbjct: 206 NYKVEER 212


>gi|29829593|ref|NP_824227.1| hypothetical protein SAV_3051 [Streptomyces avermitilis MA-4680]
 gi|29606701|dbj|BAC70762.1| hypothetical protein [Streptomyces avermitilis MA-4680]
          Length = 130

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+DE     GI+TE DI       ++ +  +      
Sbjct: 14  IGPAHTLRQAARLMSARRVGAAVVLDEDSCGVGILTERDILNSLALGQNPDAETAGSHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V+D     +GIV   D++R
Sbjct: 74  TDVVFAAPAWTLEDAATAMSHGGFRHLIVLDGSG-PVGIVSVRDIIR 119



 Score = 42.6 bits (99), Expect = 0.080,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 22/52 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D+    +GI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAARLMSARRVGAAVVLDEDSCGVGILTERDIL 54


>gi|145223673|ref|YP_001134351.1| cyclic nucleotide-binding protein [Mycobacterium gilvum PYR-GCK]
 gi|145216159|gb|ABP45563.1| cyclic nucleotide-binding protein [Mycobacterium gilvum PYR-GCK]
          Length = 615

 Score = 68.8 bits (167), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 45/109 (41%), Gaps = 3/109 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVM 289
           LV  G P+ D +  +++       +     +L GI T+ D+  R     L   ++V+ VM
Sbjct: 165 LVAPGDPVRDVVVQMTDHHVSYALIRLPDGRL-GIFTDRDLRIRVVAAGLPVDVAVDRVM 223

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + +  D      +  + +  +  + V+    + IG++   DLL  
Sbjct: 224 SAPARTVTADMTADSVLMEMLECGLRHMPVLTPRGEVIGVLEDADLLAA 272


>gi|300766637|ref|ZP_07076554.1| RpiR family gluconate operon transcriptional regulator
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300495737|gb|EFK30888.1| RpiR family gluconate operon transcriptional regulator
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 297

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/162 (22%), Positives = 66/162 (40%), Gaps = 5/162 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           SSL+ + Q         AVE +   +  +   G+G S             TG P      
Sbjct: 120 SSLDQTSQVMTEADLKRAVELLLNARS-IGFYGLGGSAVAALDGYHKFVRTGIPCAHNSD 178

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +        +   D+ +V+S +G + +   +L      S+P+IA+TS   S +A  + +
Sbjct: 179 YDMQLMQAAQMNASDVAVVISHTGRNQQTLQVLATLTSQSVPVIALTSFGNSPLAKDSTV 238

Query: 159 V-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
             +++ +E      GL   TS I Q++I D+L +      N 
Sbjct: 239 AFISVAEEINYRSEGL---TSLIAQMSIIDSLFLMTAVHGNI 277


>gi|119486862|ref|ZP_01620837.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
 gi|119456155|gb|EAW37288.1| two-component hybrid sensor and regulator [Lyngbya sp. PCC 8106]
          Length = 1781

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 227 GDSIPLVKIGCPLIDAITIL-----------------SEKRFGCVA--VVDEGQKLKGII 267
                +V    P+++A+  +                 S +R G ++  +V E  +L GI+
Sbjct: 23  ERHPLMVAPETPVLEALASMNYSQDPDSTQPSSSQNISVQREGSLSYALVMENNRLVGIL 82

Query: 268 TEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDC 323
           TE DI R   F + L+  SV DV+    +V+ E     +   +   R H I  L VV+D 
Sbjct: 83  TERDIVRLTAFRRTLSQASVGDVISPQVQVLHEAEYEGIFTVLSQFRIHQIRHLPVVNDQ 142

Query: 324 QKAIGIVH 331
            + +G++ 
Sbjct: 143 DQLLGVIT 150



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 50/116 (43%), Gaps = 11/116 (9%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVD-----EGQKL----KGIITEGDIFR--NFHKDLNT 282
                +++ + ++ + +  C+ + +     E  K+     G+ITE DI +      + + 
Sbjct: 181 PPTASVLEIVQLMVQHQVSCIVITETQTCAEDHKVIKIPVGMITERDIVQFQILGLNCDR 240

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  ++VM      +     L  A   ++Q NI  L+V  +  + +G+V   +LL  
Sbjct: 241 LRAKEVMSTPLFSVKTSDSLWSANHQIQQQNIRQLVVTGEQGELLGLVTQSNLLHA 296



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 42/231 (18%), Positives = 85/231 (36%), Gaps = 24/231 (10%)

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC-PHGLAPTTSAIMQLAIGDAL 189
           +    R    L  I   +  +VA    ++  L     S  P    P++S  + +    +L
Sbjct: 8   VPLCSRNWDNLAEILERHPLMVAPETPVLEALASMNYSQDPDSTQPSSSQNISVQREGSL 67

Query: 190 AIALLESRN-----FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           + AL+   N      +E D   L          +  + V         V          T
Sbjct: 68  SYALVMENNRLVGILTERDIVRL----TAFRRTLSQASVGDVISPQVQVLHEAEYEGIFT 123

Query: 245 ILSEKRFG---CVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLS-VEDVMIKNPKVILED 299
           +LS+ R      + VV++  +L G+IT   + +     +   L  V +V+          
Sbjct: 124 VLSQFRIHQIRHLPVVNDQDQLLGVITPASLNQALQPANFLKLRFVGEVITSQVIDAPPT 183

Query: 300 TLLTVAMQLLRQHNISVLMVVD-----DCQK----AIGIVHFLDLLRFGII 341
             +   +QL+ QH +S +++ +     +  K     +G++   D+++F I+
Sbjct: 184 ASVLEIVQLMVQHQVSCIVITETQTCAEDHKVIKIPVGMITERDIVQFQIL 234


>gi|46578861|ref|YP_009669.1| CBS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|46448273|gb|AAS94928.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|311232724|gb|ADP85578.1| putative signal transduction protein with CBS domains
           [Desulfovibrio vulgaris RCH1]
          Length = 574

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/136 (25%), Positives = 52/136 (38%), Gaps = 5/136 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
               PGG   +   C + +       PL       L +A   + E +   V V  E  + 
Sbjct: 15  GRRDPGGADTSPPSCLTPLSSLVLHPPLTLDRETSLGEAAARMVEAQVSAVLV-GEATRP 73

Query: 264 KGIITEGDIFRNFHKDL---NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           +GIITE DI R   +     +   +  VM      I E +    A+  + +H I  L+VV
Sbjct: 74  EGIITERDITRLVAEHRGMAHARPLGRVMRGGVVTIGEGSTTGEAVLRMAEHGIRHLLVV 133

Query: 321 DDCQKAIGIVHFLDLL 336
                  GI+   DLL
Sbjct: 134 SGEGTPRGILEERDLL 149


>gi|307719062|ref|YP_003874594.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
           6192]
 gi|306532787|gb|ADN02321.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
           6192]
          Length = 319

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 46/128 (35%), Gaps = 1/128 (0%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P  +L  L             +       PL      +   R   V V+ +  +L GI++
Sbjct: 10  PSPRLLELIYTLKVRDVMTRDLITATPDEPLRSIQHKMKANRITGVPVIQKH-RLVGIVS 68

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     K          M +N  V+ ED  L  A+  L +++     V+D     +G
Sbjct: 69  LDDIITALDKGYIDEPAGRHMTRNVVVLEEDMPLRFAISYLDKYHYGRFPVLDKKGSLVG 128

Query: 329 IVHFLDLL 336
           IV   D++
Sbjct: 129 IVTSRDII 136



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 1/64 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              + + TL V DVM ++      D  L      ++ + I+ + V+    + +GIV   D
Sbjct: 13  RLLELIYTLKVRDVMTRDLITATPDEPLRSIQHKMKANRITGVPVI-QKHRLVGIVSLDD 71

Query: 335 LLRF 338
           ++  
Sbjct: 72  IITA 75


>gi|255994275|ref|ZP_05427410.1| inosine-5'-monophosphate dehydrogenase [Eubacterium saphenum ATCC
           49989]
 gi|255993943|gb|EEU04032.1| inosine-5'-monophosphate dehydrogenase [Eubacterium saphenum ATCC
           49989]
          Length = 502

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/182 (20%), Positives = 64/182 (35%), Gaps = 15/182 (8%)

Query: 156 ADIVLTLPKEPESCPHG-----LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
           +++VL  P                P TSAIMQ   G+ LAIAL +    S    Y   P 
Sbjct: 29  SNVVLKTPVVKYEKGREASLSMNIPMTSAIMQAVSGEDLAIALAKEGGISF--IYGSQPI 86

Query: 211 GKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGI 266
                +            +    V+    L D + +  +     +AV ++G    K+ G+
Sbjct: 87  ESQANMVKNVKSHKAGFVTSDSNVRPDQTLRDIVELKKKNGHSTIAVTEDGTAAGKMLGL 146

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +T  D      +      V + M              L+ A  +L  H ++ L ++D+  
Sbjct: 147 VTSRDYR--VSRMKMDTKVSEFMTPFEKLICAKSGISLSEANDMLWDHKLNALPIIDEAG 204

Query: 325 KA 326
           + 
Sbjct: 205 RL 206


>gi|328955637|ref|YP_004372970.1| IMP dehydrogenase [Coriobacterium glomerans PW2]
 gi|328455961|gb|AEB07155.1| IMP dehydrogenase [Coriobacterium glomerans PW2]
          Length = 503

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 41/171 (23%), Positives = 64/171 (37%), Gaps = 16/171 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P TSAIMQ   G+++ IAL      +E     ++              V        +
Sbjct: 51  NIPMTSAIMQSVSGESMGIALA-----TEGGMSFIYGSQSSEDEAAMVKSVKDHKAGFVI 105

Query: 233 ----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
               +  G  L + + +        + V D+G    KL GI+T  D   +  +D     V
Sbjct: 106 SDSTLTPGMTLAEVMQLKMRTGHSTMPVTDDGLAHGKLLGIVTSRDYRPS--RDDPAKRV 163

Query: 286 EDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           E+ M    K+I   E   L  A  ++    ++ L VVD     +GIV   D
Sbjct: 164 EEFMTPREKLIVGDEHITLKRANDVIWDSKLNALPVVDASDYLLGIVFRKD 214


>gi|284164391|ref|YP_003402670.1| signal transduction protein with CBS domains [Haloterrigena
           turkmenica DSM 5511]
 gi|284014046|gb|ADB59997.1| putative signal transduction protein with CBS domains
           [Haloterrigena turkmenica DSM 5511]
          Length = 268

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  V     + D  T ++E        V E ++++G I+  D+      D     
Sbjct: 15  YMTRDVATVAPDETVGDVATRIAESDEHSGFPVCERRRVEGFISARDLLLADDGD----P 70

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  VM  +  V   D  +T A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 71  IFKVMATDLLVAHPDMKVTDAARVILRSGIQKLPVVDDAGNLVGIISNADVIR 123



 Score = 36.4 bits (83), Expect = 7.1,   Method: Composition-based stats.
 Identities = 11/59 (18%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D +   V++ M ++   +  D  +   A ++      S   V  + ++  G +   DLL
Sbjct: 6   DRSKPKVKEYMTRDVATVAPDETVGDVATRIAESDEHSGFPVC-ERRRVEGFISARDLL 63


>gi|239929033|ref|ZP_04685986.1| hypothetical protein SghaA1_12482 [Streptomyces ghanaensis ATCC
           14672]
 gi|291437371|ref|ZP_06576761.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291340266|gb|EFE67222.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 137

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 43/107 (40%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           +     L  A T++S +R G   V+D      GI+TE D+  +    +D ++        
Sbjct: 14  IGPAHTLRQAATLMSARRVGAAVVLDPDGTGIGILTERDVLDSVGLGQDPDSERAHAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V+D  +  +G+V   D++R
Sbjct: 74  TDVVFAAPSWTLEEAAAAMAHGGFRHLIVLDRDE-PVGVVSVRDIIR 119



 Score = 40.3 bits (93), Expect = 0.39,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A  L+    +   +V+D     IGI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAATLMSARRVGAAVVLDPDGTGIGILTERDVL 54


>gi|239834817|ref|ZP_04683145.1| Hypothetical protein OINT_2001679 [Ochrobactrum intermedium LMG
           3301]
 gi|239822880|gb|EEQ94449.1| Hypothetical protein OINT_2001679 [Ochrobactrum intermedium LMG
           3301]
          Length = 143

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
           +   + +V I   L  A   LS    G + V +      G++T+ D+ R+        +V
Sbjct: 10  TLARLSVVDIDATLESAAIALSHPGIGLLIVSNNAGTATGVLTKTDLIRHISDRNRPATV 69

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +M +N         L  A Q++  + +  + V+    K +G++   D L+
Sbjct: 70  GTLMSRNIIACDPADDLQAAWQVMVNNRLQNMPVIGAEAKPLGVLDIRDALK 121


>gi|238782519|ref|ZP_04626550.1| Hex regulon repressor [Yersinia bercovieri ATCC 43970]
 gi|238716446|gb|EEQ08427.1| Hex regulon repressor [Yersinia bercovieri ATCC 43970]
          Length = 301

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/150 (21%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +              +  D
Sbjct: 131 NRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGD 189

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  + + AR     +IAITS   + +A  A + L L    ++  +  
Sbjct: 190 VVVLISHTGRTKSLVELAHLARENDATVIAITSR-DTPLANEATLPLLLDVPEDTDMY-- 246

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
            P  S I QL + D LA      R     D
Sbjct: 247 MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 276


>gi|188580409|ref|YP_001923854.1| CBS domain containing hypothetical protein [Methylobacterium populi
           BJ001]
 gi|179343907|gb|ACB79319.1| CBS domain containing membrane protein [Methylobacterium populi
           BJ001]
          Length = 404

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 20/126 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF----------RNFHKDLNT 282
           +    PL +A+ +L       + V DE  ++ G++T+ D+           R        
Sbjct: 247 IAPEAPLREALALLRRHHIKMLPVTDESARVIGVLTQTDLMDKAEWDKRGPRLGLARRWQ 306

Query: 283 LS----------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           L+            DVM    + +  +  L      + Q     L VV    + +G+V  
Sbjct: 307 LTLGRGRAPHGCAADVMTTEVESLRPEMSLAQVAARMAQSGHHHLPVVGPEGRLMGVVSQ 366

Query: 333 LDLLRF 338
            DL+  
Sbjct: 367 SDLVAA 372



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 33/69 (47%), Gaps = 4/69 (5%)

Query: 272 IFRN----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           + R       +     +   ++ ++   I  +  L  A+ LLR+H+I +L V D+  + I
Sbjct: 219 LRRAQLSAVMRRSGPATCASILTRDVVGIAPEAPLREALALLRRHHIKMLPVTDESARVI 278

Query: 328 GIVHFLDLL 336
           G++   DL+
Sbjct: 279 GVLTQTDLM 287


>gi|86157749|ref|YP_464534.1| XRE family transcriptional regulator [Anaeromyxobacter dehalogenans
           2CP-C]
 gi|85774260|gb|ABC81097.1| putative transcriptional regulator, XRE family [Anaeromyxobacter
           dehalogenans 2CP-C]
          Length = 153

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 46/118 (38%), Gaps = 9/118 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-----FRNFHKDL 280
                 ++     L DA  ++ E+    + VVD    L G++++ D+      R    D 
Sbjct: 10  MTIGPVVIAPERTLADAHRLMRERGIRHLPVVDA-GALVGVVSQRDLYLLETLRGV--DP 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V + M   P  +  D  L    + + +H +   MVVD     IG+   +D LR 
Sbjct: 67  EQERVREAMTPEPFAVPPDASLDEVAEHMAEHRLGSAMVVD-RGVVIGLFTTVDALRA 123



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +V+  M   P VI  +  L  A +L+R+  I  L VVD     +G+V   DL
Sbjct: 1   MRKPTVQAFMTIGPVVIAPERTLADAHRLMRERGIRHLPVVD-AGALVGVVSQRDL 55



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 17/46 (36%), Gaps = 1/46 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V     L +    ++E R G   VVD    + G+ T  D  R    
Sbjct: 82  VPPDASLDEVAEHMAEHRLGSAMVVDR-GVVIGLFTTVDALRALAA 126


>gi|77461862|ref|YP_351369.1| RpiR family transcriptional regulator [Pseudomonas fluorescens
           Pf0-1]
 gi|77385865|gb|ABA77378.1| putative regulatory protein [Pseudomonas fluorescens Pf0-1]
          Length = 288

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L      +   AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREKLDP---LELQRAVTLMSQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ I +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|83311131|ref|YP_421395.1| CBS domain-containing protein [Magnetospirillum magneticum AMB-1]
 gi|82945972|dbj|BAE50836.1| CBS domain [Magnetospirillum magneticum AMB-1]
          Length = 143

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           +     +I+A+  ++  + G V VVD+     GI TE D+ R        +    V D M
Sbjct: 17  ILPSKAMIEAVQGMAAFKVGAVLVVDDKDNTLGIFTERDVTRCLAAHGARILETPVGDHM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +P        +   M  +  H+   + V+D   K  GIV   DL+
Sbjct: 77  TPDPMTCRASDSVASVMSSMSTHHFRHMPVMD-GGKMTGIVSIRDLV 122


>gi|67923321|ref|ZP_00516804.1| CBS:Cl- channel, voltage gated:UspA [Crocosphaera watsonii WH 8501]
 gi|67854844|gb|EAM50120.1| CBS:Cl- channel, voltage gated:UspA [Crocosphaera watsonii WH 8501]
          Length = 882

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 21/93 (22%), Positives = 41/93 (44%), Gaps = 3/93 (3%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
              L D +  +S        V+ E  +L GI+T+ D+ +   K      + + M + P  
Sbjct: 469 DFTLDDVLQAMSASSHRGFPVLAE-GQLVGIVTQTDLAK-LKKVPGYTPLWEFMTRKPIT 526

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  +  L+  + LL ++ +S L V  +  K +G
Sbjct: 527 VQAEASLSDVLYLLNRYQLSRLPVT-EGHKLVG 558



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 25/60 (41%), Gaps = 1/60 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L+  +VM    + +  D  L   +Q +   +     V+    + +GIV   DL +  
Sbjct: 450 LSKLTASEVMQSQVETLSSDFTLDDVLQAMSASSHRGFPVL-AEGQLVGIVTQTDLAKLK 508


>gi|30022375|ref|NP_834006.1| CBS domain-containing protein [Bacillus cereus ATCC 14579]
 gi|206971363|ref|ZP_03232314.1| CBS domain protein [Bacillus cereus AH1134]
 gi|218233320|ref|YP_002369104.1| CBS domain protein [Bacillus cereus B4264]
 gi|218899463|ref|YP_002447874.1| CBS domain protein [Bacillus cereus G9842]
 gi|228902820|ref|ZP_04066965.1| transcriptional regulator [Bacillus thuringiensis IBL 4222]
 gi|228910131|ref|ZP_04073951.1| transcriptional regulator [Bacillus thuringiensis IBL 200]
 gi|228923049|ref|ZP_04086342.1| transcriptional regulator [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228941462|ref|ZP_04104013.1| transcriptional regulator [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228954581|ref|ZP_04116606.1| transcriptional regulator [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228960562|ref|ZP_04122211.1| transcriptional regulator [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228967362|ref|ZP_04128397.1| transcriptional regulator [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228974393|ref|ZP_04134962.1| transcriptional regulator [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228980986|ref|ZP_04141289.1| transcriptional regulator [Bacillus thuringiensis Bt407]
 gi|229048016|ref|ZP_04193592.1| transcriptional regulator [Bacillus cereus AH676]
 gi|229071800|ref|ZP_04205015.1| transcriptional regulator [Bacillus cereus F65185]
 gi|229081557|ref|ZP_04214055.1| transcriptional regulator [Bacillus cereus Rock4-2]
 gi|229111770|ref|ZP_04241318.1| transcriptional regulator [Bacillus cereus Rock1-15]
 gi|229129574|ref|ZP_04258544.1| transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|229146882|ref|ZP_04275247.1| transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|229152497|ref|ZP_04280689.1| transcriptional regulator [Bacillus cereus m1550]
 gi|229180574|ref|ZP_04307916.1| transcriptional regulator [Bacillus cereus 172560W]
 gi|229192506|ref|ZP_04319469.1| transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|29897933|gb|AAP11207.1| CBS domain containing protein [Bacillus cereus ATCC 14579]
 gi|206734135|gb|EDZ51306.1| CBS domain protein [Bacillus cereus AH1134]
 gi|218161277|gb|ACK61269.1| CBS domain protein [Bacillus cereus B4264]
 gi|218542065|gb|ACK94459.1| CBS domain protein [Bacillus cereus G9842]
 gi|228591083|gb|EEK48939.1| transcriptional regulator [Bacillus cereus ATCC 10876]
 gi|228602998|gb|EEK60477.1| transcriptional regulator [Bacillus cereus 172560W]
 gi|228631105|gb|EEK87742.1| transcriptional regulator [Bacillus cereus m1550]
 gi|228636710|gb|EEK93175.1| transcriptional regulator [Bacillus cereus BDRD-ST24]
 gi|228653891|gb|EEL09759.1| transcriptional regulator [Bacillus cereus BDRD-Cer4]
 gi|228671764|gb|EEL27060.1| transcriptional regulator [Bacillus cereus Rock1-15]
 gi|228701762|gb|EEL54250.1| transcriptional regulator [Bacillus cereus Rock4-2]
 gi|228711395|gb|EEL63355.1| transcriptional regulator [Bacillus cereus F65185]
 gi|228723473|gb|EEL74842.1| transcriptional regulator [Bacillus cereus AH676]
 gi|228778777|gb|EEM27041.1| transcriptional regulator [Bacillus thuringiensis Bt407]
 gi|228785443|gb|EEM33453.1| transcriptional regulator [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228792397|gb|EEM39964.1| transcriptional regulator [Bacillus thuringiensis serovar sotto
           str. T04001]
 gi|228799162|gb|EEM46130.1| transcriptional regulator [Bacillus thuringiensis serovar pakistani
           str. T13001]
 gi|228805238|gb|EEM51832.1| transcriptional regulator [Bacillus thuringiensis serovar kurstaki
           str. T03a001]
 gi|228818243|gb|EEM64317.1| transcriptional regulator [Bacillus thuringiensis serovar berliner
           ATCC 10792]
 gi|228836682|gb|EEM82030.1| transcriptional regulator [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228849648|gb|EEM94482.1| transcriptional regulator [Bacillus thuringiensis IBL 200]
 gi|228856829|gb|EEN01344.1| transcriptional regulator [Bacillus thuringiensis IBL 4222]
 gi|326942079|gb|AEA17975.1| CBS domain-containing protein [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 210

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|149189201|ref|ZP_01867488.1| sialic acid synthase [Vibrio shilonii AK1]
 gi|148836955|gb|EDL53905.1| sialic acid synthase [Vibrio shilonii AK1]
          Length = 751

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 3/100 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMI 290
           +     L+ A+  LSEK+   + VVD  + + G + +GDI R   +    L   V     
Sbjct: 12  ISHSATLVKALKELSEKKTKILFVVDHNETVVGALADGDIRRYLVEKSQDLNAPVIQAAN 71

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           K+ + I  D  ++    LL    I  + +VD     +G++
Sbjct: 72  KDFQYIYSDQPISNGYNLL-SSKIKNVPIVDKSGLLVGVI 110


>gi|127513722|ref|YP_001094919.1| CBS domain-containing protein [Shewanella loihica PV-4]
 gi|126639017|gb|ABO24660.1| CBS domain containing protein [Shewanella loihica PV-4]
          Length = 142

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 50/133 (37%), Gaps = 14/133 (10%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF- 276
           +           +  +++   L     I     F  + V+ E   L+G+++E D  R   
Sbjct: 1   MATRVSEIMSTRVVTIEMDDRLTIVKEIFDSAPFHHLLVI-ENDSLQGVLSERDYLRTLS 59

Query: 277 -----------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                        D        VM ++P  I  +  +  A QL+  H+I  L V+    K
Sbjct: 60  PHIGSIGETERDSDTLQRRAHQVMSRDPITIAPEADIKTAGQLMLAHDIGCLPVM-AFSK 118

Query: 326 AIGIVHFLDLLRF 338
            +GI+ + DLLR 
Sbjct: 119 IVGIITWKDLLRA 131


>gi|186470680|ref|YP_001861998.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184196989|gb|ACC74952.1| CBS domain containing membrane protein [Burkholderia phymatum
           STM815]
          Length = 242

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/130 (21%), Positives = 49/130 (37%), Gaps = 27/130 (20%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNT 282
               + DA  +  + R   + VVD   ++ GI+++GD+             R +   L +
Sbjct: 28  PDMSIHDAARLFVDNRISGMPVVDGEGQVVGIVSQGDLLHRVENGTGHGKRRWWLDFLLS 87

Query: 283 LS--------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                           V DVM      I ED  L     L+ + ++  + V+    K +G
Sbjct: 88  SPREQAARYVKEHAHVVGDVMCDRVISITEDMPLDRIADLMERRHLKRVPVL-KDGKLVG 146

Query: 329 IVHFLDLLRF 338
           IV   +L+R 
Sbjct: 147 IVSRSNLIRA 156



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R   K    +   D+M  +      D  +  A +L   + IS + VVD   + +GIV  
Sbjct: 4   RRAQAKG-AIMRALDIMTTSVVTATPDMSIHDAARLFVDNRISGMPVVDGEGQVVGIVSQ 62

Query: 333 LDLL 336
            DLL
Sbjct: 63  GDLL 66


>gi|116334165|ref|YP_795692.1| transcriptional regulator [Lactobacillus brevis ATCC 367]
 gi|116099512|gb|ABJ64661.1| Transcriptional regulator [Lactobacillus brevis ATCC 367]
          Length = 286

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/160 (25%), Positives = 67/160 (41%), Gaps = 5/160 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSLE++ +         AV K+   + +V   G+G S             T     +  
Sbjct: 108 ISSLEATNEALSEKDLARAVLKLINAE-KVTFFGLGGSSIAALDGYHKFLRTALSVTYYP 166

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             +        ++  D  +V+S SG + E   ++   +R  + +IAITS + S +A  AD
Sbjct: 167 DFDIQLMQAARLSDQDCAVVISHSGRNSETLQVVEELQRNDVSIIAITSYSGSPLAQAAD 226

Query: 158 IV-LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +  L+L  E      G+    S I QLAI D L +  +  
Sbjct: 227 VTFLSLTDEVNYRSEGM---YSLISQLAILDTLFMMTVLR 263


>gi|326335495|ref|ZP_08201682.1| CBS domain protein [Capnocytophaga sp. oral taxon 338 str. F0234]
 gi|325692261|gb|EGD34213.1| CBS domain protein [Capnocytophaga sp. oral taxon 338 str. F0234]
          Length = 138

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 14/135 (10%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +             I  +     L +A  +  +     + VV EG KL G+++  D+ R 
Sbjct: 1   MKQRVPVSQIMSKDIVTLTPTQTLYEAEALFKKHNIRHIPVV-EGHKLIGVLSLTDLLRI 59

Query: 276 FHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              DL+              ++  VM K P  I  DT +  A ++L       L V D+ 
Sbjct: 60  SFADLSDDEKHVDSIVYDMFTIPQVMAKVPLSISPDTTIKEAAEILAGQTFHSLPVTDNG 119

Query: 324 QKAIGIVHFLDLLRF 338
              IG++   DLL++
Sbjct: 120 N-LIGMLTTTDLLKY 133


>gi|294501284|ref|YP_003564984.1| transcriptional repressor CcpN [Bacillus megaterium QM B1551]
 gi|295706631|ref|YP_003599706.1| transcriptional repressor CcpN [Bacillus megaterium DSM 319]
 gi|294351221|gb|ADE71550.1| transcriptional repressor CcpN [Bacillus megaterium QM B1551]
 gi|294804290|gb|ADF41356.1| transcriptional repressor CcpN [Bacillus megaterium DSM 319]
          Length = 213

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 60/142 (42%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L T  +    V        +V     + DAI  +  +  G + VVDE  +L
Sbjct: 62  FYTGKTGAQLLTDKIKKIQVQEYQSIPVVVNENVSVYDAICTMFLEDVGTLFVVDEKSQL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P       + LL    ++L +  I  + V
Sbjct: 122 VGVLSRKDLLRASIGKQELTSIPVHIIMTRMPNITYCYREDLLIDIAKILIEKQIDAMPV 181

Query: 320 VDDCQ---KAIGIVHFLDLLRF 338
           + +     + +G +   ++ + 
Sbjct: 182 IKEGDGNFEVVGRITKTNITKL 203



 Score = 43.7 bits (102), Expect = 0.041,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 26/48 (54%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P V+ E+  +  A+  +   ++  L VVD+  + +G++   DLLR  I
Sbjct: 88  PVVVNENVSVYDAICTMFLEDVGTLFVVDEKSQLVGVLSRKDLLRASI 135


>gi|312197593|ref|YP_004017654.1| signal transduction protein with CBS domains [Frankia sp. EuI1c]
 gi|311228929|gb|ADP81784.1| putative signal transduction protein with CBS domains [Frankia sp.
           EuI1c]
          Length = 146

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 51/122 (41%), Gaps = 6/122 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RN 275
              A D+MH   +   +     L+DA   + +   G + +  E  +L+GIIT+ DI  R 
Sbjct: 1   MTTARDIMHRDATC--IGSTQTLLDAARKMRDLGVGALPICGEDDRLQGIITDRDIVIRC 58

Query: 276 FH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D  T     +    P  +  D  L   +  + +  +  + V+D+  + +G++   
Sbjct: 59  LASGGDPGTTPASALAQGTPLYVDADANLDQVLARMSEKRVKRVPVIDN-HRLVGMISEA 117

Query: 334 DL 335
           DL
Sbjct: 118 DL 119



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 23/54 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M ++   I     L  A + +R   +  L +  +  +  GI+   D++
Sbjct: 2   TTARDIMHRDATCIGSTQTLLDAARKMRDLGVGALPICGEDDRLQGIITDRDIV 55


>gi|229544973|ref|ZP_04433698.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
 gi|229309865|gb|EEN75852.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
          Length = 184

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + +     Q    +E+IK  K  + + G G+SG      A+ L   G     V 
Sbjct: 9   LNELTQNAEKIEMEQILIFLEEIKKAK-HIFLLGAGRSGIAIQAFANRLMHLGFKVSLVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG ++ LK++   A    + +  IT +  S +   A 
Sbjct: 68  EISSPHS-----QPGDLLIICSGSGETESLKSLAKKAVESDVTIGLITMKGDSTIGKLAS 122

Query: 158 IVLTLPKEPESCPHG-----LAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            ++ LP   ++           P  SA  QLA    D++ + L++    +    +  H
Sbjct: 123 SIIVLPGTTKNENVHHSKEFKQPMGSAFEQLAFLTFDSIILNLMDEMEETSEKMFNRH 180


>gi|197295275|ref|YP_002153816.1| hypothetical protein BCAS0431 [Burkholderia cenocepacia J2315]
 gi|195944754|emb|CAR57359.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 141

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L DA  ++S+   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQSLRDAAKLMSDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPNE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S+E V+        ED  ++   + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  SIEGVVSGPANWCYEDDDISAVQKKMEDAQIRRVPVVDRQKRLVGIVALGDL 118



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 4   VSEVMTRDAATIGPTQSLRDAAKLMSDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|311280765|ref|YP_003942996.1| 6-phospho-3-hexuloisomerase [Enterobacter cloacae SCF1]
 gi|308749960|gb|ADO49712.1| 6-phospho-3-hexuloisomerase [Enterobacter cloacae SCF1]
          Length = 186

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 42/178 (23%), Positives = 68/178 (38%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           LS L+ +       Q    +E IK  +  + + G G+SG      A+ L   G     V 
Sbjct: 11  LSELQRNALNIDDVQAGHFIESIKNAR-HIFLQGAGRSGIAIRGFANRLLHLGFSVSIVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  L ++   A    + +  +T + +S +   A 
Sbjct: 70  DVSSPHT-----KPGDLVIIGSGSGETGSLVSLAQKAAACGVDVALVTLKAESTIGKLAK 124

Query: 158 IVLTLP---KEPESCPHG--LAPTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            VL LP   KE      G    P  SA  Q      DA+ + L+     + +  +  H
Sbjct: 125 SVLVLPGTVKEDNDRQEGAFSQPMGSAFEQLCFITYDAIVLELMAQIGETSDSMFKRH 182


>gi|119486071|ref|ZP_01620133.1| Multi-sensor Hybrid Histidine Kinase [Lyngbya sp. PCC 8106]
 gi|119456846|gb|EAW37974.1| Multi-sensor Hybrid Histidine Kinase [Lyngbya sp. PCC 8106]
          Length = 1008

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 47/103 (45%), Gaps = 3/103 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMI 290
           +V     + D +T+L++ +     +V E Q+L GI T  D + +     L  + ++ VM 
Sbjct: 23  IVTPETCITDVLTLLNQSQEADCVLVVEAQQLVGIFTTSDGVRQIVEGSLQKIPIKKVMT 82

Query: 291 KNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +    + E     +   + LL+QH I  L ++    K  G++ 
Sbjct: 83  QPVITLDESEYRDIFQVLSLLKQHQIYHLPIISREGKLQGLIT 125


>gi|306834091|ref|ZP_07467211.1| CBS domain protein [Streptococcus bovis ATCC 700338]
 gi|304423664|gb|EFM26810.1| CBS domain protein [Streptococcus bovis ATCC 700338]
          Length = 224

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 49/118 (41%), Gaps = 14/118 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDL 280
           V     +  A  ++ E+    + V+ E  KL GI+TE  +                +  L
Sbjct: 19  VSPDTTVAHAADMMREQGLRRLPVI-ENDKLVGIVTERTMAEASPSKATTLSIYEMNYLL 77

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   + DVMI++   +     L  A+  + ++ + ++ VV+  Q   G++   D+ + 
Sbjct: 78  NKTKIRDVMIRDVVTVSPYASLEDAIYTMMKNRVGIVPVVESDQ-VYGVITDKDVFKA 134



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++V+D M K    +  DT +  A  ++R+  +  L V+++  K +GIV 
Sbjct: 6   MAVKDFMTKKVVYVSPDTTVAHAADMMREQGLRRLPVIEND-KLVGIVT 53



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI  + + R G V VV E  ++ G+IT+ D+F+ F
Sbjct: 86  MIRDVVTVSPYASLEDAIYTMMKNRVGIVPVV-ESDQVYGVITDKDVFKAF 135


>gi|85116008|ref|XP_964976.1| inosine-5'-monophosphate dehydrogenase IMD2 [Neurospora crassa
           OR74A]
 gi|28926775|gb|EAA35740.1| inosine-5'-monophosphate dehydrogenase IMD2 [Neurospora crassa
           OR74A]
          Length = 536

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 62/189 (32%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + + L  P           P  S+ M       +AI +            V+H       
Sbjct: 59  SAVTLDSPITKRITL--KTPLVSSPMDTVTEHEMAIHMALQGGVG-----VIHHNCSPDE 111

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G    KL GI+T
Sbjct: 112 QADMVRKVKRYENGFILDPVVITRDTTVGEAKALKEKWGFGGFPVTESGNLGSKLVGIVT 171

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F  DL+   V +VM+ +         L  A ++L +     L ++D     + 
Sbjct: 172 NRDI--QFETDLDK-PVSEVMVTDLITATAGVNLLEANKILAESKKGKLPIIDKEGNLVS 228

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 229 MISRSDLTK 237


>gi|308071960|dbj|BAJ21969.1| 6-phospho-3-hexuloisomerase [Methylothermus subterraneus]
          Length = 179

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/173 (20%), Positives = 60/173 (34%), Gaps = 8/173 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  +   L            + I A   +V + G G+SG +       L   G  +F + 
Sbjct: 9   LDKITEILAATPDDYEDRLTKMIDAAD-QVFVGGQGRSGLVTKFFVMRLMHAGYKAFALG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL IV+S SG +  L      A+     ++ IT+++ S +   AD
Sbjct: 68  ETVTP-----AIRAGDLFIVISGSGETGSLITNAKKAKEIGAKVVLITAKSSSTIGDIAD 122

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
            VL +  +         P  +     A    +A    ++  +N  E +    H
Sbjct: 123 EVLQIGTDSSYQKVFGLPMGTMFELSALIFLEAQISHVIHEKNIPEEEMRSRH 175


>gi|260460892|ref|ZP_05809142.1| sugar isomerase (SIS) [Mesorhizobium opportunistum WSM2075]
 gi|259033469|gb|EEW34730.1| sugar isomerase (SIS) [Mesorhizobium opportunistum WSM2075]
          Length = 208

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/184 (18%), Positives = 59/184 (32%), Gaps = 13/184 (7%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           +  L+ L   L+     +   A + +    GRVV+ G G+        A  L   G P  
Sbjct: 30  RTALAELGGVLERVDESRIDTACKMLADA-GRVVVYGCGREALQVKGFAMRLYHLGLPVS 88

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            +   D+ +  S  G +  +  ++  A       + +T++ +S  A 
Sbjct: 89  VVGDMNTPP-----LGPGDVFLASSGPGETTTVLTLMQVAHAAGATNLLLTAQAESSAAK 143

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL-------AIALLESRNFSENDFYVL 207
            AD  L +P +  +   G   T+   M      AL        + L      S       
Sbjct: 144 RADFTLLIPAQTMANDQGAQKTSVLPMGSVFEGALFLLFEVMVLKLKSLTGASPEAMRAR 203

Query: 208 HPGG 211
           H   
Sbjct: 204 HTNM 207


>gi|315497835|ref|YP_004086639.1| signal transduction protein with cbs domains [Asticcacaulis
           excentricus CB 48]
 gi|315415847|gb|ADU12488.1| putative signal transduction protein with CBS domains
           [Asticcacaulis excentricus CB 48]
          Length = 141

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               I +++   PL  A  ++ +   G + V  E  +L+G +T+ DI  R   + L+   
Sbjct: 7   MSRDIKIIRPDTPLAVAARLMRDCDCGYLPV-GEDDRLQGAVTDRDIVVRGLAEGLSPDA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V +VM       LE   + VA + ++   I  L V+D  ++ +G++   D+ R
Sbjct: 66  QVSEVMTDRIVCCLESDHVDVAARHMKAEQIRRLCVLDVNRRIVGVLSIGDIAR 119



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           ++DVM ++ K+I  DT L VA +L+R  +   L V +D  +  G V   D++  G+
Sbjct: 3   IKDVMSRDIKIIRPDTPLAVAARLMRDCDCGYLPVGEDD-RLQGAVTDRDIVVRGL 57


>gi|254172810|ref|ZP_04879484.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus sp. AM4]
 gi|214032966|gb|EEB73794.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus sp. AM4]
          Length = 406

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 24/198 (12%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              ++++     +  +  SL+ E    F  A   I A   ++ I G G+SG +G   A  
Sbjct: 214 TIRKAMLDILDHIKGVAESLKLEQVRGFVDA--MIGA--NKIFIYGAGRSGLVGKAFAMR 269

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L       + V                DL+I +S SG +  +      A+     + AIT
Sbjct: 270 LMHLDFNVYVVGETITP-----AFEPGDLLIAISGSGETQSIVDAARIAKEQGGKIAAIT 324

Query: 146 SENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALA 190
           S   S +   AD+V+ +P   ++                 +AP  +      +   D + 
Sbjct: 325 SYANSTLGKLADVVVEIPGRAKTDVPTDYIARQMLTQYKWIAPMGTLFEDSTMIFLDGII 384

Query: 191 IALLESRNFSENDFYVLH 208
             L+ +   +E D    H
Sbjct: 385 ALLMATFQKTEKDMKRKH 402


>gi|297619862|ref|YP_003707967.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297378839|gb|ADI36994.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 153

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/151 (17%), Positives = 49/151 (32%), Gaps = 35/151 (23%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HK 278
            +         +K    + D I +L   +   V V+D    L G+++E D+ R       
Sbjct: 2   AIKEIMKKPITIKQDDEIYDLIKLLRTHKISGVPVLDADNYLVGMVSESDVIRALVVQDS 61

Query: 279 DLN-------------------------------TLSVEDVMIKNPKVILEDTLLTVAMQ 307
           D+N                                  V ++M      I  D+ ++ A  
Sbjct: 62  DINLIAPSPLDLVELPLKTIFKMDEYRKEINEALKTKVSEIMTTEVIYITLDSSISDAAT 121

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++    I+ L VV +     GI+   DL+  
Sbjct: 122 IMADKKINRLPVV-NNGVLEGIITRGDLMEE 151



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 35/59 (59%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++++++M K P  I +D  +   ++LLR H IS + V+D     +G+V   D++R  ++
Sbjct: 1   MAIKEIM-KKPITIKQDDEIYDLIKLLRTHKISGVPVLDADNYLVGMVSESDVIRALVV 58



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 14/44 (31%), Positives = 25/44 (56%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           + +   + DA TI+++K+   + VV+    L+GIIT GD+    
Sbjct: 110 ITLDSSISDAATIMADKKINRLPVVN-NGVLEGIITRGDLMEEL 152


>gi|293604639|ref|ZP_06687041.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
 gi|292816970|gb|EFF76049.1| CBS domain protein [Achromobacter piechaudii ATCC 43553]
          Length = 152

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
               P+  A+  +SE+  G + V+ E   L G++T  +I R+ H        ++  +M  
Sbjct: 19  SPDMPVSQAVQTMSEQDIGSL-VIMEFGTLTGMLTFREIIRHMHAHGGAGETTIRSIMDD 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  APVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLMGVISFYDMAQA 123


>gi|261884394|ref|ZP_06008433.1| opuBA [Campylobacter fetus subsp. venerealis str. Azul-94]
          Length = 188

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/130 (22%), Positives = 53/130 (40%), Gaps = 5/130 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF       +    F     +M+       ++    L++AI+++  +R   + V D   
Sbjct: 38  EDFIGKDRLIQAQQHFQTVDQIMNPNPVT--IRPEGTLLEAISLMRSRRVDSLLVTDNDN 95

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L+G I+   I R  + D     V  +M  N   + E+TLL  A + +    +  + V D
Sbjct: 96  VLEGFISIEMIDRTKNYD---TPVSFIMQTNLSTVKENTLLRDATRNILVRGLKYVPVTD 152

Query: 322 DCQKAIGIVH 331
              + IG+V 
Sbjct: 153 QDNRLIGLVT 162



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 25/59 (42%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      +  +V+ +M  NP  I  +  L  A+ L+R   +  L+V D+     G +  
Sbjct: 45  RLIQAQQHFQTVDQIMNPNPVTIRPEGTLLEAISLMRSRRVDSLLVTDNDNVLEGFISI 103


>gi|167919276|ref|ZP_02506367.1| SIS domain protein [Burkholderia pseudomallei BCC215]
          Length = 293

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|110597229|ref|ZP_01385517.1| CBS [Chlorobium ferrooxidans DSM 13031]
 gi|110341065|gb|EAT59533.1| CBS [Chlorobium ferrooxidans DSM 13031]
          Length = 148

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                  +K  C + +A+ I+ +     + V         GI+TE DI           H
Sbjct: 16  MQKEFHKIKGSCTVAEALQIMKKSAESGLLVEPRNEDDCYGIVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    +     +  A++L+++ NI  L V+ +  K +G+++  D+L 
Sbjct: 76  RDPWNTPVFQIMSKPLISVNPGLRIKYALRLMKRTNIRRLTVM-EGNKVVGVLNMADVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135


>gi|332291925|ref|YP_004430534.1| signal transduction protein with CBS domains [Krokinobacter
           diaphorus 4H-3-7-5]
 gi|332170011|gb|AEE19266.1| putative signal transduction protein with CBS domains
           [Krokinobacter diaphorus 4H-3-7-5]
          Length = 154

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
                +++ +  L + +     VV+E  +L GII+EGD        R ++  ++ + V +
Sbjct: 35  SPDQSVLEVMNNLIKHKISGGPVVNENNELLGIISEGDCMKQISESRYYNMPMDNMKVSN 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            M+ N   I  +  +  A     +       +V +  K +G +   D+L+  +
Sbjct: 95  HMVTNVDTIDGNMNVFDAANKFLESKHRRFPIV-ENGKLVGQISQKDVLKAAL 146



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + V D M +       D  +   M  L +H IS   VV++  + +GI+   D ++
Sbjct: 20  DIKVSDYMSRKLITFSPDQSVLEVMNNLIKHKISGGPVVNENNELLGIISEGDCMK 75


>gi|293553913|ref|ZP_06674518.1| transcriptional regulator, RpiR family [Enterococcus faecium E1039]
 gi|294615479|ref|ZP_06695347.1| transcriptional regulator [Enterococcus faecium E1636]
 gi|291591682|gb|EFF23323.1| transcriptional regulator [Enterococcus faecium E1636]
 gi|291601901|gb|EFF32148.1| transcriptional regulator, RpiR family [Enterococcus faecium E1039]
          Length = 282

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 78/195 (40%), Gaps = 8/195 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           M    +   +++   +    ++ +  A +   +    L+  +  LQ +       A   I
Sbjct: 72  MLIQENDLSAISIHENIQKTDTELTMAQKVFESSISTLNDTKKLLQQK---DLKKAATII 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
              K RV   G+G S  + +        +   +           +  ++T  +  +++S 
Sbjct: 129 NESK-RVYFFGVGGSEIVATDAYHKFLRSPIATSHSTDYHIQLMEASLLTEKNCAVLISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV-LTLPKEPESCPHGLAPTTSA 179
           +G S E   I    R+     I ITS+  S +A   D+V +++ +E E     LA   S 
Sbjct: 188 TGQSKETIHIAETVRKTGAKTIVITSQANSSLAKLGDVVFISISEETEFRSEALA---SR 244

Query: 180 IMQLAIGDALAIALL 194
           I QL+I D+L + L+
Sbjct: 245 ISQLSILDSLYVILM 259


>gi|293396861|ref|ZP_06641135.1| transcriptional regulator [Serratia odorifera DSM 4582]
 gi|291420332|gb|EFE93587.1| transcriptional regulator [Serratia odorifera DSM 4582]
          Length = 274

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 47/109 (43%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           + I G+  S  IG  L   L   G P+        +  +   +  +D+ I +S SGS+ +
Sbjct: 127 IQIYGVAASAIIGDFLQYKLLRLGKPALLFSDMHRAAMNAASLAENDVAIAISSSGSTKD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +   +  A++    +I I++  +S +A  A+ +L   K       G  P
Sbjct: 187 VLHAVTLAKQRHAQVIVISNNQRSPLAKLANTLLVAAKPEGPLNAGALP 235


>gi|293400293|ref|ZP_06644439.1| inosine-5'-monophosphate dehydrogenase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
 gi|291306693|gb|EFE47936.1| inosine-5'-monophosphate dehydrogenase [Erysipelotrichaceae
           bacterium 5_2_54FAA]
          Length = 506

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/161 (22%), Positives = 65/161 (40%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ   G+ +A AL       F      V      +  + +  +  ++S  + 
Sbjct: 54  NIPMVSAIMQSVSGERMACALAREGGISFIYGSQSVEDEAAMVKRVKMTKAGFVYSDSN- 112

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
             ++    L D + +        +AV ++G    KL GIIT  D      +    + V +
Sbjct: 113 --IRPDATLQDVLDLKERTGHATMAVTEDGTAEGKLVGIITSRDYR--ISRMDTAMKVSE 168

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M    K+I   +   L+ A  L+ +H ++ L ++D+ Q  
Sbjct: 169 FMTPFEKLIYGKDGCTLSEANDLIWEHKLNQLPIIDEEQHL 209


>gi|262164833|ref|ZP_06032571.1| helix-turn-helix protein RpiR [Vibrio mimicus VM223]
 gi|262172920|ref|ZP_06040597.1| sialic acid utilization regulator RpiR family [Vibrio mimicus
           MB-451]
 gi|261890278|gb|EEY36265.1| sialic acid utilization regulator RpiR family [Vibrio mimicus
           MB-451]
 gi|262027213|gb|EEY45880.1| helix-turn-helix protein RpiR [Vibrio mimicus VM223]
          Length = 281

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/174 (18%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 22  STVQCALRS-IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             ++ A    +   ++ +  +++ L  + + Q   A         ++ + GIG S  + +
Sbjct: 98  QIIEKAKHLFVSTIEQSIGLIDAELVEQCAQQLLKA--------NKIALAGIGASAIVAA 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +   L   G    F            ++  +D+++V+S  G++ E+   +  A++    
Sbjct: 150 DINHKLIRAGFNVQFNQDYHIQIVQASLLKANDVLLVVSARGNTQEVLTAIERAKQNGAQ 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +IA+T   +  VA  AD V+      E    G+   T  ++Q+A  D +   L+
Sbjct: 210 VIALTRYGRDKVAQLADYVIPYSYTEEHSQLGMV--TPQLLQMAAFDIVFFKLI 261


>gi|259047716|ref|ZP_05738117.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
 gi|259035907|gb|EEW37162.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
          Length = 267

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 6/170 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +H    + K++  +        T+Q  L S +       S E +L+       +  +  +
Sbjct: 59  VHLAQKNTKTIDEQIEKDDSIKTIQSKLFSTVT-----RSYEMTLELLDDSALNNIISLM 113

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +  K ++   G+G SG + +     L+  G    +   +      L   T++DLII +S+
Sbjct: 114 RNAK-KIYAFGVGASGMVCNDFYFKLSRIGKNIIYHTDSHTQLASLSSATKEDLIIGVSY 172

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           S  + E+      A+   IP ++IT    + +   +   L +P+   +  
Sbjct: 173 SAQTKEVATAFVIAKERGIPTVSITGLGNTQLDSLSTYCLKIPRHENTIR 222


>gi|150401325|ref|YP_001325091.1| CBS domain-containing protein [Methanococcus aeolicus Nankai-3]
 gi|150014028|gb|ABR56479.1| CBS domain containing protein [Methanococcus aeolicus Nankai-3]
          Length = 266

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 7/121 (5%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                 +   ++ +V       + I ++ +       V+ E  KL GII+  DIF     
Sbjct: 1   MVKVKEYMTKTVDVVTPNNTAGEVIDLIKKTTHDTFPVI-EDNKLIGIISVHDIFDV--- 56

Query: 279 DLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  +E++M K  K+I    D  +    +++ +   S L VV+D  + +GI+   D++
Sbjct: 57  -EKSEKIENLMTKREKMIITRPDAPVRDVGRIMFRTGFSKLPVVNDNNELVGIITNTDVI 115

Query: 337 R 337
           R
Sbjct: 116 R 116


>gi|254235218|ref|ZP_04928541.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|313110975|ref|ZP_07796815.1| hypothetical protein PA39016_002870050 [Pseudomonas aeruginosa
           39016]
 gi|126167149|gb|EAZ52660.1| conserved hypothetical protein [Pseudomonas aeruginosa C3719]
 gi|310883317|gb|EFQ41911.1| hypothetical protein PA39016_002870050 [Pseudomonas aeruginosa
           39016]
          Length = 137

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 7   MSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLAVRGLADGLGADR 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 66  PVREVMSGELRYCFEDEEVDHVAKNMAQLEKRRLPVMDRNKRLVGIVSLANI 117



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V ++M +  + +   T L  A  L+RQ +I  L+V ++ ++  G+V   DL
Sbjct: 1   MKVREIMSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDL 52


>gi|92115387|ref|YP_575315.1| RpiR family transcriptional regulator [Chromohalobacter salexigens
           DSM 3043]
 gi|91798477|gb|ABE60616.1| transcriptional regulator, RpiR family [Chromohalobacter salexigens
           DSM 3043]
          Length = 289

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 36/183 (19%), Positives = 68/183 (37%), Gaps = 8/183 (4%)

Query: 17  SLMKNSTVQCALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
           S+  + +V     +I     G L S+   L          AV  + A+  RV   G G S
Sbjct: 86  SMNDSDSVAEFAHNIFDSTVGTLLSVRDRLDH---AALGKAVTAL-AMANRVEFYGFGAS 141

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
           G +              +         +     +T  D+++ +S +G +  L A +  AR
Sbjct: 142 GAVAFDAQHKFFRLQISTAAYTDPHMQNMSAVTLTPRDVVVAISQTGRTRALVASVRLAR 201

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
                +I +     S +A    + L +    ++  +   P +S +  L I D LA+ + +
Sbjct: 202 ETGATVIGLCPS-DSPLASEVTLPLYIDVHEDTEIY--TPMSSRVAHLVIIDVLAVGVAK 258

Query: 196 SRN 198
           +R 
Sbjct: 259 TRG 261


>gi|295111795|emb|CBL28545.1| IMP dehydrogenase/GMP reductase [Synergistetes bacterium SGP1]
          Length = 503

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/168 (22%), Positives = 61/168 (36%), Gaps = 10/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P TSA+MQ    D +A+AL      S    +   P      +            +   
Sbjct: 51  NVPLTSAVMQSVSDDRMAVALAREGGLSF--IFCSQPIESEAEMVRRVKRYKAGFVANDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +     L D + +        VAV  +G    +L GI+T  D      +   +  V D 
Sbjct: 109 SIGPDETLADILALKDRTGHTTVAVTHDGSLTGRLLGIVTSRDYR--VSRMDASAPVRDF 166

Query: 289 MIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M    K++   +   L+ A  +L +H ++ L VVD+    +  V   D
Sbjct: 167 MTPIDKIVFARDGLTLSEANDILWEHKLNALPVVDNEGNMVAFVFRKD 214


>gi|157962157|ref|YP_001502191.1| DNA-binding transcriptional regulator HexR [Shewanella pealeana
           ATCC 700345]
 gi|157847157|gb|ABV87656.1| transcriptional regulator, RpiR family [Shewanella pealeana ATCC
           700345]
          Length = 284

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSIDTAAINKAVDILTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVISF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIDIAKLARENGAAVIGITAR-HSPLSTVC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL I D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVIIDVLATGFTLRRG 259


>gi|78357089|ref|YP_388538.1| hypothetical protein Dde_2046 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219494|gb|ABB38843.1| CBS protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 150

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 48/139 (34%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------- 272
                  V     +I+A  ++ E +F  + VVD+  KL G++ + D+             
Sbjct: 8   MSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLVAQQKKVNLPSLF 67

Query: 273 --------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                           +  + +    V D M  NP  +  DT L     L+       L 
Sbjct: 68  TILDGFIPLKSLSDMDSEMRKVAATRVSDAMTDNPATVTPDTPLDEVATLMVDSKYYTLP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV      +G+V   D+LR
Sbjct: 128 VV-KDGILVGVVGKEDVLR 145



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           LS +D+M  +P  +  D  +  A +L+ ++  + L VVDD  K +G++   DL+
Sbjct: 2   LSAKDIMSADPVTVAPDMDIIEATKLMLEYKFNGLPVVDDAGKLVGVLCQSDLV 55


>gi|89094412|ref|ZP_01167352.1| CBS domain containing membrane protein [Oceanospirillum sp. MED92]
 gi|89081304|gb|EAR60536.1| CBS domain containing membrane protein [Oceanospirillum sp. MED92]
          Length = 214

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  +    P+  A   +       + V +E Q+  G+I++ D+       +    V
Sbjct: 93  MVSPVHTIPPYTPISTAWKRMDSLNISHLIVCEEDQRPLGLISKTDLLEAGPSSV--TQV 150

Query: 286 EDVMIKNPKVILEDTLLTV-AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++  +       +T +   A+  +  ++I+ + VVD   K +GIV   DLLR 
Sbjct: 151 KEIYSQKLIAAAPETRVQDVAINFIE-NDINSIPVVDKDDKVVGIVCRTDLLRL 203



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 17/58 (29%), Positives = 32/58 (55%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +L+V  +M+     I   T ++ A + +   NIS L+V ++ Q+ +G++   DLL  G
Sbjct: 86  SLTVSHLMVSPVHTIPPYTPISTAWKRMDSLNISHLIVCEEDQRPLGLISKTDLLEAG 143


>gi|196250431|ref|ZP_03149123.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
 gi|196210090|gb|EDY04857.1| transcriptional regulator, RpiR family [Geobacillus sp. G11MC16]
          Length = 248

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/153 (19%), Positives = 60/153 (39%), Gaps = 8/153 (5%)

Query: 22  STVQCALRSIIAEK-----RGLSSLESSLQGELSFQFHCAVEKIKA---IKGRVVITGIG 73
           S ++  L++I  +        +   ++ +   L       VE+I        RV++  +G
Sbjct: 65  SELRYILKTIDDQAIPVGENTIERYKADMNQTLDSLERKHVEEISQLIFEANRVLVVAVG 124

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  IG   +  L     PS +V+ +        M+   D++I +S SG +  +      
Sbjct: 125 LSKMIGEYFSKLLIQVNKPSSYVYESHIIDLLPNMVQPKDMVIFISSSGETKTIVQAAEK 184

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
            R  +I  +AIT+   S +A      ++   + 
Sbjct: 185 LRFKNIETVAITNSADSTLAKLVRKHISAYVQR 217


>gi|83310313|ref|YP_420577.1| signal transduction protein [Magnetospirillum magneticum AMB-1]
 gi|82945154|dbj|BAE50018.1| Predicted signal transduction protein [Magnetospirillum magneticum
           AMB-1]
          Length = 880

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 1/110 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVE 286
             +  +     L  A+T L   R     V+ EG    GIITE D+ R          +V 
Sbjct: 178 RPMVTIPNDASLAQAVTQLRNARADAAIVLGEGDLPPGIITERDVLRLIAGTGPIPATVG 237

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V  +    I E+  L  A  +L Q +I  + +     + +G++ F D+L
Sbjct: 238 EVASRPLLTITEEDSLLAARAMLEQKHIRHIGITRMDGELVGLLSFSDIL 287



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 3/91 (3%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              VV E  K  GI TE D       D       + DVM    K I   + +       +
Sbjct: 73  SSIVVVEDGKPVGIWTERDALAINIADPQAFQRPISDVMSTPVKTIRTGSTIGDTGMRFK 132

Query: 311 QHNISVLMVVDDCQKAIGIVHFLD-LLRFGI 340
              +   +VVD+  +A+GIV   D +L  G+
Sbjct: 133 LEGVRHFVVVDEAGEAMGIVSQSDVILGHGV 163



 Score = 43.0 bits (100), Expect = 0.060,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 41/115 (35%), Gaps = 2/115 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTL 283
               +  ++ G  + D       +      VVDE  +  GI+++ D  +       L   
Sbjct: 111 MSTPVKTIRTGSTIGDTGMRFKLEGVRHFVVVDEAGEAMGIVSQSDVILGHGVEHFLVLR 170

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V   + +    I  D  L  A+  LR       +V+ +     GI+   D+LR 
Sbjct: 171 PVRSAISRPMVTIPNDASLAQAVTQLRNARADAAIVLGEGDLPPGIITERDVLRL 225


>gi|47096433|ref|ZP_00234027.1| phosphosugar-binding transcriptional regulator, RpiR family,
           putative [Listeria monocytogenes str. 1/2a F6854]
 gi|254828804|ref|ZP_05233491.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL N3-165]
 gi|254900470|ref|ZP_05260394.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes J0161]
 gi|254913580|ref|ZP_05263592.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937840|ref|ZP_05269537.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes F6900]
 gi|255017149|ref|ZP_05289275.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria monocytogenes FSL F2-515]
 gi|47015228|gb|EAL06167.1| phosphosugar-binding transcriptional regulator, RpiR family,
           putative [Listeria monocytogenes str. 1/2a F6854]
 gi|258601215|gb|EEW14540.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes FSL N3-165]
 gi|258610444|gb|EEW23052.1| phosphosugar-binding transcriptional regulator [Listeria
           monocytogenes F6900]
 gi|293591593|gb|EFF99927.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 273

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 68/160 (42%), Gaps = 3/160 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           ++ +  L+ +       +   A + I   +  V I  +G S  I  +L++ L   G    
Sbjct: 94  RQFVDGLQDTKSFIEQEKLEQAAKMIHRAE-HVYILSVGTSAFIAMQLSNRLKRLGKFVE 152

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           FV         + M+ + D++I +S SG++ E+   +  A +   P++ +++   S ++ 
Sbjct: 153 FVPDGHLQSIYVTMVKKTDIVIGISKSGNTKEVIQNIELASQSGAPVVTLSNFINSKISQ 212

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
             D+ L    +      G    ++ + QL + D L   L+
Sbjct: 213 MGDVSLVASSKEFLSDAG--SFSAEVSQLYLLDTLIKVLV 250


>gi|312211324|emb|CBX91409.1| similar to inosine-5'-monophosphate dehydrogenase [Leptosphaeria
           maculans]
          Length = 545

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 35/189 (18%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++ L  P           P  S+ M       +AI +            ++H       
Sbjct: 67  SEVTLDTPITKRITL--KTPFVSSPMDTVTEHNMAIHIALLGGLG-----IIHHNCSQED 119

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G    KL GIIT
Sbjct: 120 QAEMVRKVKRYENGFILDPVVISPTTTVAEAKALKEKWGFGGFPVTENGTLRSKLVGIIT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +   D     V  VM  +         L  A  +L +     L +VD+    I 
Sbjct: 180 PRDIQFH---DKLDDPVTAVMSTDLVTARHGVELKEANDILNKSKKGKLPIVDESGNLIA 236

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 237 LLSRSDLMK 245


>gi|223999293|ref|XP_002289319.1| predicted protein [Thalassiosira pseudonana CCMP1335]
 gi|220974527|gb|EED92856.1| predicted protein [Thalassiosira pseudonana CCMP1335]
          Length = 528

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 68/172 (39%), Gaps = 13/172 (7%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI  AL        ++F +     ++  +    +  +     +
Sbjct: 76  KVPFVSSPMDTVTEHKMAISMALQGGIGIIHSNFTMEDQAEEVRKVKRFKNGFITDPICL 135

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
                   + D I +  +  +  + + D G    KL GI++  DI      D  T+ +E+
Sbjct: 136 ---SPSSTVGDVIELKEKHGYSGIPITDNGRMGGKLVGIVSNRDITFV---DDRTMKLEE 189

Query: 288 VMIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M    K  V  +   L  A ++L++     L VV+D  + + ++   DLL+
Sbjct: 190 IMTPRDKLSVAKQGVELIEANEILKETKKGKLPVVNDADELVALIARTDLLK 241


>gi|170718706|ref|YP_001783897.1| DNA-binding transcriptional repressor RpiR [Haemophilus somnus
           2336]
 gi|168826835|gb|ACA32206.1| transcriptional regulator, RpiR family [Haemophilus somnus 2336]
          Length = 283

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 59/143 (41%), Gaps = 3/143 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
             A +     + R +    G S  I   +       G                 ++T +D
Sbjct: 122 SEAAKCFFNAQNRDLYAAGG-SNTICDDIEHKFLRIGIRCNTYRDIHLMMMSASLLTEND 180

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +I+V+S SG + +L  ++Y A++    +I IT  + S +A  +D V+  P          
Sbjct: 181 VILVVSHSGKTTDLLKVVYEAKQNGAKIICITHSDISPIAVISDFVICTPAPDTPLLGKN 240

Query: 174 APTTSAIMQLAIGDALAIALLES 196
           A  ++ I+QL + DA  +++ + 
Sbjct: 241 A--SARILQLILVDAFFVSVAQQ 261


>gi|150396267|ref|YP_001326734.1| signal-transduction protein [Sinorhizobium medicae WSM419]
 gi|150027782|gb|ABR59899.1| putative signal-transduction protein with CBS domains
           [Sinorhizobium medicae WSM419]
          Length = 142

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 50/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
            G  +  V     +  A T+L E   G V VVD   ++ GI+TE DI  +  +       
Sbjct: 10  KGHDVITVTEQVTVQQAATLLHENHIGAVVVVDPEDQIVGIMTERDIVASIARYGASCLD 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V  VM +N     E+  +   M+++ +     L V +   +  GI+   D++++
Sbjct: 70  KPVSSVMWQNVYCCREEMSVDTLMEMMSKLRARHLPV-EREGRLAGIISIGDVVKY 124


>gi|53802823|ref|YP_115437.1| SIS domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53802836|ref|YP_115431.1| SIS domain-containing protein [Methylococcus capsulatus str. Bath]
 gi|53756584|gb|AAU90875.1| SIS domain protein [Methylococcus capsulatus str. Bath]
 gi|53756597|gb|AAU90888.1| SIS domain protein [Methylococcus capsulatus str. Bath]
          Length = 177

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 56/161 (34%), Gaps = 7/161 (4%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
              +   +  +     R+ + G G+SG +    A  L   G   F V            I
Sbjct: 18  DAGYDAKLTAMLDQASRIFVAGAGRSGLVAKFFAMRLMHGGYDVFVVGEIVTP-----SI 72

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
            + DL+IV+S SG ++ + A    A+     +  I++ + S +   AD V  +       
Sbjct: 73  RKGDLLIVISGSGETETMLAFTKKAKEQGASIALISTRDSSSLGDLADSVFRIGSPELFG 132

Query: 170 PHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
                P  +      L   +A    ++  +   E +    H
Sbjct: 133 KVVGMPMGTVFELSTLLFLEATISHIIHEKGIPEEEMRTRH 173


>gi|75761900|ref|ZP_00741825.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|74490608|gb|EAO53899.1| CBS domain containing protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
          Length = 211

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQMTLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 181 VVKDTKQGLEVIGRITKTNITRA 203


>gi|330946397|gb|EGH47478.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 187

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G  + +F  A++ +   +  +   G+G  S     +L + L   G P     
Sbjct: 3   ATLRQHLAGFEATRFAAAIDCVADAR-MIHTFGMGGCSSLCSEELQTRLVRLGYPVAACR 61

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 62  DPVMMRMVAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 120

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L            PT +    L   D LA  L  +   S  D
Sbjct: 121 VVLPLQIAET--NFISKPTAARYGMLLTIDVLATELALA---SPED 161


>gi|327400285|ref|YP_004341124.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327315793|gb|AEA46409.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 126

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIK 291
           V    P+ D   I+ EK+ G V V     K  GI TE D+  +   +      V      
Sbjct: 14  VDYKTPVKDVCKIMGEKKIGSVIVT-RDGKAFGIFTERDLLSKVLLEGSLDEEVGKYAST 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              VI  D  +  A +++    I  L+V++D +   GI    DL R
Sbjct: 73  PLIVITPDYDVREAARIMADMKIKRLVVMEDEE-VKGIFTSADLAR 117



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + + DVM+++   +   T +    +++ +  I  ++V     KA GI    DLL
Sbjct: 1   MRIGDVMVRDVVSVDYKTPVKDVCKIMGEKKIGSVIVT-RDGKAFGIFTERDLL 53


>gi|325262710|ref|ZP_08129446.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium sp. D5]
 gi|324031804|gb|EGB93083.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Clostridium sp. D5]
          Length = 241

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 6/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV-HAAEASHG 104
             E   +   AV+ I+   G+++  GIG SG +G   A   ++ G  S ++         
Sbjct: 98  STEYEERISRAVQVIQDA-GQLIFIGIGTSGILGKYGARYFSNLGKYSQYIEDPYYPVRA 156

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           DL     D ++I LS SG + E+  +    +     L++IT+ +   +A  AD  L    
Sbjct: 157 DL----EDTVVIALSESGETQEIVKLAGRFKEHHCRLVSITNGSGCTLAKMADCPLAYYV 212

Query: 165 EPE 167
              
Sbjct: 213 SER 215


>gi|302526804|ref|ZP_07279146.1| predicted protein [Streptomyces sp. AA4]
 gi|302435699|gb|EFL07515.1| predicted protein [Streptomyces sp. AA4]
          Length = 200

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 10/115 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI----------FRNFHKDLNT 282
           V+      +A  IL+E+ F  + VVD+  +L GI+TE D+           R +H     
Sbjct: 14  VRPWTSADEAAGILAERGFPALPVVDDDGRLVGIVTEADLGRGRTPAPDGRRPYHPGALE 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V  VM      +     L    + L       + +V +  + +GIV   D++R
Sbjct: 74  TTVGAVMTSPAAAMPPGADLADVCRELVDAKSQAMPIVVEGSRVVGIVTRGDVVR 128



 Score = 54.5 bits (130), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   D+M    + +   T    A  +L +     L VVDD  + +GIV   DL R
Sbjct: 1   MRARDLMTSPAETVRPWTSADEAAGILAERGFPALPVVDDDGRLVGIVTEADLGR 55



 Score = 37.6 bits (86), Expect = 2.5,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             G  L D    L + +   + +V EG ++ GI+T GD+ R   +  +T    DV
Sbjct: 88  PPGADLADVCRELVDAKSQAMPIVVEGSRVVGIVTRGDVVRVLAR-ADTAIAADV 141


>gi|226355453|ref|YP_002785193.1| hypothetical protein [Deinococcus deserti VCD115]
 gi|226317443|gb|ACO45439.1| putative CBS domain protein [Deinococcus deserti VCD115]
          Length = 585

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/136 (22%), Positives = 49/136 (36%), Gaps = 7/136 (5%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
             L        L       +       LV     +  A   + ++R   V V  EG    
Sbjct: 120 ARLRAADAGLDLESFVVHDLM--VPPQLVAPDATVQQAAARMRDERVSSVMVPLEG--FF 175

Query: 265 GIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T+ D+      D    T  V +VM        ++     A+ L+ +HNI  L ++  
Sbjct: 176 GILTDKDLRNRVLADGLPPTTPVREVMSAPALTAPDNVTALSALNLMFRHNIRHLPLM-R 234

Query: 323 CQKAIGIVHFLDLLRF 338
             + +G+V    LLR 
Sbjct: 235 GPQLVGMVGTAQLLRL 250


>gi|148254445|ref|YP_001239030.1| signal-transduction protein [Bradyrhizobium sp. BTAi1]
 gi|146406618|gb|ABQ35124.1| Putative signal-transduction protein with CBS domains
           [Bradyrhizobium sp. BTAi1]
          Length = 333

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 47/131 (35%), Gaps = 28/131 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    P+ +   +L  +    V VVD      G+++EGD+                    
Sbjct: 8   VFADTPVREIARLLLGQGISAVPVVDAEGLPLGMVSEGDLMGRNDLERVAGTEWWLQLLA 67

Query: 274 --RNFHKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                H+D          +  DVM      + EDT +    +LL  H I  + VV    +
Sbjct: 68  GQEEVHRDWPASAHVLARTARDVMSAPVVAVGEDTSVPEIARLLTAHRIKRVPVV-RDGR 126

Query: 326 AIGIVHFLDLL 336
            +GIV   +LL
Sbjct: 127 IVGIVSRANLL 137



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 21/48 (43%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M      +  DT +    +LL    IS + VVD     +G+V   DL+
Sbjct: 1   MTTAVVSVFADTPVREIARLLLGQGISAVPVVDAEGLPLGMVSEGDLM 48


>gi|146309499|ref|YP_001189964.1| RpiR family transcriptional regulator [Pseudomonas mendocina ymp]
 gi|145577700|gb|ABP87232.1| transcriptional regulator, RpiR family [Pseudomonas mendocina ymp]
          Length = 288

 Score = 68.4 bits (166), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 34/178 (19%), Positives = 60/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L  E   +   A  + +    RV   G G SG + +
Sbjct: 89  DSVADFSLKIFDTTLHTLMEVREKLDPEALQRAIAACSQAQ----RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ I +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLNAAAYSDPHMQAMSAVTLKPSDVAICISQSGRSKDLLITANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  A + L +  + ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELATVNLAIDVQEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|330947703|gb|EGH48192.1| KpsF/GutQ [Pseudomonas syringae pv. pisi str. 1704B]
          Length = 46

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 26/45 (57%)

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
             + L   A++++  + IS L+VVD   + +G  +  DLLR G++
Sbjct: 2   HAEMLAAEALKIMEDNKISALVVVDQNDRPVGAFNLQDLLRAGVM 46


>gi|330505743|ref|YP_004382612.1| RpiR family transcriptional regulator [Pseudomonas mendocina NK-01]
 gi|328920029|gb|AEB60860.1| RpiR family transcriptional regulator [Pseudomonas mendocina NK-01]
          Length = 288

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L  E       A+      + RV   G G SG + +
Sbjct: 89  DSVADFSLKIFDTTLHTLMEVREKLDPE---ALQRAIAACSNAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLNAAAYSDPHMQAMSAVTLQPGDVAVCISQSGRSKDLLISANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +  + ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVQEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|327400243|ref|YP_004341082.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Archaeoglobus veneficus SNP6]
 gi|327315751|gb|AEA46367.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Archaeoglobus veneficus SNP6]
          Length = 516

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 3/126 (2%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G                           +++A  I+   + G V VV+ G+K  GI T+
Sbjct: 141 AGHGLDRLYSVRVADVVSRDAVTCTPETSVLEAAQIMDRNKVGSVVVVN-GKKPVGIFTQ 199

Query: 270 GDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            D+ +   + +N   SV   M      + E   L  A   +  + I+ ++V+ +     G
Sbjct: 200 RDLMKLVARGVNLEESVGSYMTSPIISVSESDSLIDAYLAIVTNAINHIVVMSNGD-VKG 258

Query: 329 IVHFLD 334
           +V   D
Sbjct: 259 VVSTKD 264



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L ++ V DV+ ++      +T +  A Q++ ++ +  ++VV + +K +GI    DL++ 
Sbjct: 148 LYSVRVADVVSRDAVTCTPETSVLEAAQIMDRNKVGSVVVV-NGKKPVGIFTQRDLMKL 205


>gi|305662915|ref|YP_003859203.1| glutamine--fructose-6-phosphate transaminase [Ignisphaera aggregans
           DSM 17230]
 gi|304377484|gb|ADM27323.1| glutamine--fructose-6-phosphate transaminase [Ignisphaera aggregans
           DSM 17230]
          Length = 622

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/173 (28%), Positives = 81/173 (46%), Gaps = 9/173 (5%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           L+ I  +   +S   SSL   +  ++  +V K+ A   RV+ITG G S H G  +A+ L 
Sbjct: 271 LKEIHEQPYAVSMTLSSLSENI--EYIDSVVKLIAKADRVIITGAGTSFHAG-YIAALLL 327

Query: 88  STGTPSFFVH--AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           +     F +   ++EA    +  +   D++I +S SG + +    +  ARR     IAI+
Sbjct: 328 NRYADIFVLPIISSEAM-WWMNSVGEKDIVIAISQSGETIDTLKAVREARRRGALTIAIS 386

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +   S +   +DI L     PE    G+A T +   Q+ +   LAI +   RN
Sbjct: 387 NVLDSTIPRESDIALYTNAGPE---IGVAATKTFTAQVVLLSYLAINVARYRN 436


>gi|207727611|ref|YP_002256005.1| putative cbs-domain-containing transmembrane protein [Ralstonia
           solanacearum MolK2]
 gi|206590850|emb|CAQ56462.1| putative cbs-domain-containing transmembrane protein [Ralstonia
           solanacearum MolK2]
          Length = 288

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/159 (17%), Positives = 49/159 (30%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP---LVKIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P    V     +  A+ +L      
Sbjct: 118 WLDIDPEDLTALLQEMQQQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVK 177

Query: 253 CVAVVDEGQKLKGIITEGD------------IFRNFHKDLNTLS-VEDVMIKNPKVILED 299
            + V+D+G++L GI+T  D            +   F     T   V  VM      I  D
Sbjct: 178 SLPVLDDGRRLIGIVTRADLTGTAARAPRQRLRDWFAIGAMTPPRVSGVMTPRVLTIRAD 237

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + L        + VVD   +  GI+   D++  
Sbjct: 238 APMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHA 276



 Score = 39.5 bits (91), Expect = 0.81,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ DI    ++
Sbjct: 234 IRADAPMADLVPLFASAGHHHIPVVDAHGRLAGILTQADIIHALYR 279


>gi|158338543|ref|YP_001519720.1| CBS domain-containing protein [Acaryochloris marina MBIC11017]
 gi|158308784|gb|ABW30401.1| CBS domain containing membrane protein, putative [Acaryochloris
           marina MBIC11017]
          Length = 151

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 44/110 (40%), Gaps = 6/110 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFR---NFHKDLNTLSVEDV 288
           +     + DA++ + EK    + V         G++T+ DI      F  D   + V +V
Sbjct: 15  ISGSATVADAVSKMKEKGLRALIVEPRYAGDPYGMVTQTDIVYKVAAFGYDPKKMKVYEV 74

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M K   V+  D  +    +L     I    VV D    +G++   D+L+ 
Sbjct: 75  MTKPCIVVNPDLGVEYVARLFANTGIRRAPVVKD--HLLGVISISDILKK 122



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 9/55 (16%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVHFLDLL 336
           +  E++M ++   I     +  A+  +++  +  L+V         G+V   D++
Sbjct: 2   MRAEEIMTRDVVAISGSATVADAVSKMKEKGLRALIVEPRYAGDPYGMVTQTDIV 56


>gi|77919219|ref|YP_357034.1| chloride channel protein EriC [Pelobacter carbinolicus DSM 2380]
 gi|77545302|gb|ABA88864.1| chloride channel protein EriC [Pelobacter carbinolicus DSM 2380]
          Length = 606

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 45/107 (42%), Gaps = 2/107 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             ++   G    L+    PL D I  +S        V+D   ++ GI +  D+ R  H++
Sbjct: 469 VGELAEFGREPTLIPEDMPLNDIIEQMSGSDTNYFPVIDRQGEMTGIFSINDLRRILHEE 528

Query: 280 L--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           +  + +   DV I      + +  LT+A++   +  I  + VVD   
Sbjct: 529 IPPSLILARDVAISQVVTTIPEESLTLALRKFTRRGIEEIPVVDSEH 575


>gi|152976728|ref|YP_001376245.1| CBS domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025480|gb|ABS23250.1| CBS domain containing protein [Bacillus cytotoxicus NVH 391-98]
          Length = 211

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 62  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQTTLL 121

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVI---LEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P +     ED+L  VAM+L+    I  + 
Sbjct: 122 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCHKEDSLYDVAMELIE-RQIDAIP 180

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV + ++    +G +   ++ R 
Sbjct: 181 VVKETKQGLEVVGRITKTNITRA 203


>gi|294630006|ref|ZP_06708566.1| RpiR-family transcriptional regulator [Streptomyces sp. e14]
 gi|292833339|gb|EFF91688.1| RpiR-family transcriptional regulator [Streptomyces sp. e14]
          Length = 313

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/131 (25%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R  + GIG SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 155 RTDVYGIGASGLVAQDLTQKLLRIGLIAHAHSDPHLAVTNAVQLRAGDVAIAITHSGSTG 214

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +AIT    + V  +AD VLT     ES     A  +S   QL +
Sbjct: 215 DVIEPLRVAFDRGATTVAITGRPDAPVTQYADHVLTTSTARESE-LRPAAMSSRTSQLLV 273

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 274 VDCLFVGVAQR 284


>gi|258507123|ref|YP_003169874.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus GG]
 gi|257147050|emb|CAR86023.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus GG]
 gi|259648493|dbj|BAI40655.1| transcriptional regulator [Lactobacillus rhamnosus GG]
          Length = 289

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 5/182 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             + KN ++      +        SL  ++           ++ I   + ++++ G+G S
Sbjct: 84  QEIQKNESLTTIKAKLKT--NASRSLAETVDQINENTVQTIIDLIHRSR-QILLFGVGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR-DDLIIVLSWSGSSDELKAILYYA 134
                 +A   +  G    F                   L   +S SG S E       A
Sbjct: 141 YLSVQNIAQKWSRLGYACHFSDDLNLFLPVAATADPKHTLTWFISNSGESPEAVLGAKLA 200

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           ++  +P+IA T    + +  +ADIV+    +P   P+  A T S   Q  + D L  A +
Sbjct: 201 KKAGLPVIATTKLGSNALTHYADIVIQTS-QPMEAPNRFAATQSLHAQFMLIDILYYAYV 259

Query: 195 ES 196
             
Sbjct: 260 SR 261


>gi|221196437|ref|ZP_03569484.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
 gi|221203109|ref|ZP_03576128.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221177043|gb|EEE09471.1| CBS domain containing protein [Burkholderia multivorans CGD2]
 gi|221182991|gb|EEE15391.1| CBS domain containing protein [Burkholderia multivorans CGD2M]
          Length = 164

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 44/117 (37%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  ++     G + V D   +L  I+T+ DI  R      +   
Sbjct: 29  MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-HGELVAIVTDRDIAVRALAHGRSPDT 87

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V  V  +  +   ED  +    Q +    +  + V+D  ++ +GIV   D+  R G
Sbjct: 88  PVRAVASEPVQWCTEDEGVGDVQQRMADVQLHRMPVLDRHRRVVGIVSLGDIATRAG 144



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A +L+++ +I VL V D   + + IV   D+
Sbjct: 25  VNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDH-GELVAIVTDRDI 74


>gi|297618860|ref|YP_003706965.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297377837|gb|ADI35992.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 130

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 54/116 (46%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLN 281
               I  V     L  A   L EK    V + +E  K+ G+++  D+   F      +L 
Sbjct: 7   MNPEIYKVSPEESLYSAFKKLHEKGVRRVFI-EEDTKIVGVVSYRDLVNVFVNKGIFELF 65

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++D  IK+   I ++  +  A Q++   +I+ L+V+D+ +  +G+V   D+LR
Sbjct: 66  DTKIKDFAIKDILKINKNESVAHAAQIMLHADITGLLVIDEYENPVGVVSQTDVLR 121



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V +VM      +  +  L  A + L +  +  + + ++  K +G+V + DL+
Sbjct: 1   MKVNEVMNPEIYKVSPEESLYSAFKKLHEKGVRRVFI-EEDTKIVGVVSYRDLV 53


>gi|254827716|ref|ZP_05232403.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
 gi|258600095|gb|EEW13420.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL N3-165]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 7/108 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG--DIFRNFHKDLNTL 283
              +   +     L  AIT++ EKR   + VVDEG  LKG I     D+ R         
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFIDVEQIDLNRRIA-----T 309

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           SV D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 310 SVMDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|304385338|ref|ZP_07367683.1| RpiR family gluconate operon transcriptional regulator [Pediococcus
           acidilactici DSM 20284]
 gi|304328545|gb|EFL95766.1| RpiR family gluconate operon transcriptional regulator [Pediococcus
           acidilactici DSM 20284]
          Length = 280

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/179 (22%), Positives = 72/179 (40%), Gaps = 6/179 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S V  A +   A    L +   SL           V+ +   + +V I G+G S  + 
Sbjct: 87  SDSPVTVAEKVFAANADALKATVKSLSET---DLAICVQLLLDAQ-QVGIFGLGASNIVA 142

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T     + +           +T  D+++++S SG   +  A+   A +  +
Sbjct: 143 LDGYHKFLRTPLDVVYANDFHMQIMAATRLTAKDVMLLISHSGEDRDAIALANLALQHQV 202

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           PLI ITS   + +A  AD+ L +    E+     A   + I Q++I DAL +++    N
Sbjct: 203 PLILITSSANATLAKMADVTL-ISVAEEALYRSEA-LHALIAQMSIMDALFMSVAIKTN 259


>gi|229019521|ref|ZP_04176338.1| transcriptional regulator [Bacillus cereus AH1273]
 gi|229025763|ref|ZP_04182162.1| transcriptional regulator [Bacillus cereus AH1272]
 gi|228735471|gb|EEL86067.1| transcriptional regulator [Bacillus cereus AH1272]
 gi|228741777|gb|EEL91960.1| transcriptional regulator [Bacillus cereus AH1273]
          Length = 210

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQAILL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|161522569|ref|YP_001585498.1| CBS domain-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189348559|ref|YP_001941755.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|160346122|gb|ABX19206.1| CBS domain containing protein [Burkholderia multivorans ATCC 17616]
 gi|189338697|dbj|BAG47765.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
          Length = 141

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L DA  ++ +   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQTLRDAAKLMDDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           S+E V+        ED  +    + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  SIEGVVSGPANWCYEDDDIAEVQKKMEDAQIRRVPVVDREKRLVGIVALGDL 118



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V DVM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 4   VADVMTRDAATIGPTQTLRDAAKLMDDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|147919880|ref|YP_686369.1| hypothetical protein RCIX1864 [uncultured methanogenic archaeon
           RC-I]
 gi|110621765|emb|CAJ37043.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 260

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 51/128 (39%), Gaps = 1/128 (0%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +     +   +    +P V     L  A   +     G + VV +G ++ G+++  D+F 
Sbjct: 57  STKSNVTIDGYVRLDVPTVTPDTDLATAARKIISTDEGRLPVVLDGGRIVGMLSIVDMFE 116

Query: 275 NFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 L  + V +VM +   V      ++   + + +  +    VV    + IG++   
Sbjct: 117 GVDDLGLPDMPVSEVMTRKVVVCEPGDPISKVWRNMTEFGLYGFPVVRSGMEVIGMITRE 176

Query: 334 DLLRFGII 341
           D+L+ G +
Sbjct: 177 DILKRGYV 184



 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 48/121 (39%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLN 281
               + + + G P+      ++E       VV  G ++ G+IT  DI +     F ++  
Sbjct: 132 MTRKVVVCEPGDPISKVWRNMTEFGLYGFPVVRSGMEVIGMITREDILKRGYVRFQREDE 191

Query: 282 TLS-----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +      V+ +M      + ED  +  A  +  +  I  L VV    K  GIV   D+L
Sbjct: 192 AMRKPSSIVQMIMSTPAITVSEDDRVKKAAGIFAERGIGRLPVV-KNGKLTGIVDRYDIL 250

Query: 337 R 337
           +
Sbjct: 251 K 251



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + VEDVM  NP  +     +T A +L+R +NI  L VV    K  G++   D++
Sbjct: 1   MKVEDVMSVNPVWVSPGEFVTKARELMRDNNIQSLPVV-KNGKYAGMITVQDII 53


>gi|29830466|ref|NP_825100.1| transcriptional regulator [Streptomyces avermitilis MA-4680]
 gi|29607578|dbj|BAC71635.1| putative RpiR-family transcriptional regulator [Streptomyces
           avermitilis MA-4680]
          Length = 308

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV + G+G SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 154 RVDVYGVGASGLVAQDLTQKLLRIGLIAHAHSDPHLAVTNAVQLRAKDVAIAITHSGSTG 213

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +A+T      V  +AD +LT     ES     A  +S   QL +
Sbjct: 214 DVIEPLRVAFERGATTVAVTGRPDGPVTQYADHILTTSTARESE-LRPAAMSSRTSQLLV 272

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 273 VDCLFVGVAQR 283


>gi|16803468|ref|NP_464953.1| hypothetical protein lmo1428 [Listeria monocytogenes EGD-e]
 gi|47095379|ref|ZP_00232989.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|224501631|ref|ZP_03669938.1| hypothetical protein LmonFR_03782 [Listeria monocytogenes FSL
           R2-561]
 gi|254829813|ref|ZP_05234468.1| hypothetical protein Lmon1_00590 [Listeria monocytogenes 10403S]
 gi|254898406|ref|ZP_05258330.1| hypothetical protein LmonJ_01285 [Listeria monocytogenes J0161]
 gi|254936430|ref|ZP_05268127.1| opuCA [Listeria monocytogenes F6900]
 gi|9651975|gb|AAF91339.1|AF249729_1 ATPase OpuCA [Listeria monocytogenes]
 gi|16410857|emb|CAC99506.1| opuCA [Listeria monocytogenes EGD-e]
 gi|47016200|gb|EAL07123.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 1/2a F6854]
 gi|258609022|gb|EEW21630.1| opuCA [Listeria monocytogenes F6900]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|229174971|ref|ZP_04302491.1| transcriptional regulator [Bacillus cereus MM3]
 gi|228608639|gb|EEK65941.1| transcriptional regulator [Bacillus cereus MM3]
          Length = 210

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPAVIDKNVSVYDAICTMFLEDVGTLFVVDQAILL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  +AM+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNITMCRREDSLYDIAMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|57640410|ref|YP_182888.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus kodakarensis
           KOD1]
 gi|57158734|dbj|BAD84664.1| bifunctional D-arabino 3-hexulose-6-phosphate formaldehyde
           lyase/phosphohexuloisomerase [Thermococcus kodakarensis
           KOD1]
          Length = 406

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 20/159 (12%)

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            ++ I G G+SG +G   A  L       + V        + G     DL+I +S SG +
Sbjct: 249 NKIFIYGAGRSGLVGKAFAMRLMHLDFNVYVVGETITPAFEAG-----DLLIAISGSGET 303

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG------------ 172
             +      A+     ++ ITS   S +   AD+V+ +P   ++                
Sbjct: 304 KSIVDAAQIAKEQGGKVVGITSYADSTLGKLADVVVEIPGRTKADVPTDYIARQMLTQYK 363

Query: 173 -LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            +AP  +      +   D +   L+ +   +E D    H
Sbjct: 364 WIAPMGTLFEDSTMVFLDGIIALLMATFQKTEKDMKRKH 402


>gi|328725353|ref|XP_003248439.1| PREDICTED: inosine-5'-monophosphate dehydrogenase-like
           [Acyrthosiphon pisum]
          Length = 358

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 4/76 (5%)

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISVLMV 319
            +L GIIT  D+   F ++  ++ + DVM K +       T L  A ++L+++ I  L +
Sbjct: 1   MELIGIITNRDLR--FIENF-SIKISDVMTKEDLVTAPVGTTLEQAEEILQKYKIEKLPL 57

Query: 320 VDDCQKAIGIVHFLDL 335
           + +  K  G++   D+
Sbjct: 58  ISEEGKLKGLITIKDI 73


>gi|284043366|ref|YP_003393706.1| signal transduction protein with CBS domains [Conexibacter woesei
           DSM 14684]
 gi|283947587|gb|ADB50331.1| putative signal transduction protein with CBS domains [Conexibacter
           woesei DSM 14684]
          Length = 139

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           +V  G  L +A  ++  +  G   V+D+ Q   G++TE D+     +  D +   V D +
Sbjct: 13  VVGPGHTLREAAELMHTRSIGSAIVLDQDQPGPGLLTERDVLAAIGRGLDPDREMVADHL 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +      D  L  A   + +     L+VV +  + +G++   D++R
Sbjct: 73  TSDLVFAAPDWSLEQAACEMVRGGFRHLIVV-EGGELVGVLSMRDVVR 119



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 24/56 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V + M     V+     L  A +L+   +I   +V+D  Q   G++   D+L  
Sbjct: 1   MQVREGMSATSLVVGPGHTLREAAELMHTRSIGSAIVLDQDQPGPGLLTERDVLAA 56


>gi|315497579|ref|YP_004086383.1| transcriptional regulator, rpir family [Asticcacaulis excentricus
           CB 48]
 gi|315415591|gb|ADU12232.1| transcriptional regulator, RpiR family [Asticcacaulis excentricus
           CB 48]
          Length = 292

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 56/160 (35%), Gaps = 3/160 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           G  +L  +L          AV  +   K R+ + GIG S  +       L   G  S  V
Sbjct: 115 GAQALSDTLSVLDPVAMTEAVRLMTQAK-RIEVYGIGSSAPVAEDANYRLLRIGLESKVV 173

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +            D  ++ +S SG++ E       A       I IT+  +S +  HA
Sbjct: 174 IDSHVQAISASRTGPDVAVLTISHSGATHETLTSTRLAHEAGARTIVITNFTRSPIFAHA 233

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           D+ L                TS I QL + DAL  AL   
Sbjct: 234 DVRLLT--MARETLFRTEAMTSRIAQLCVVDALIAALALH 271


>gi|162149398|ref|YP_001603859.1| hypothetical protein GDI_3636 [Gluconacetobacter diazotrophicus PAl
           5]
 gi|161787975|emb|CAP57579.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
           PAl 5]
          Length = 271

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/154 (22%), Positives = 57/154 (37%), Gaps = 26/154 (16%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P        V     + +   +  V    PL  A+ ++ E     V V+  G  + G++T
Sbjct: 27  PAPSWKRARVMRVRDIMTASVVG-VAPTDPLEKAVGLMLEHGISGVPVLGVGGHVVGVLT 85

Query: 269 EGDIFRNFHKDL------------------------NTLSVEDVMIKNPKVILEDTLLTV 304
           EGD+ R    D                         ++  V D+M  +P  I  D  L  
Sbjct: 86  EGDLLRRSELDTEPGRSWLGDWLRSPGRAASDYVRTHSHRVIDLMSDSPVTIAPDATLRE 145

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A+ ++  H +  L V+    + +GI+   DLLR 
Sbjct: 146 AVDMMLAHRVKRLPVI-QDGRMVGILSRADLLRA 178



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + T      D+M   DS   +     L +A+ ++   R   + V+ +  ++ GI++  D+
Sbjct: 119 VRTHSHRVIDLM--SDSPVTIAPDATLREAVDMMLAHRVKRLPVI-QDGRMVGILSRADL 175

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKV 295
            R   +  +  T +V DV I+N   
Sbjct: 176 LRALMRAASGPTETVSDVQIQNEIT 200


>gi|56962485|ref|YP_174211.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
 gi|56908723|dbj|BAD63250.1| RpiR family transcriptional regulator [Bacillus clausii KSM-K16]
          Length = 268

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/183 (18%), Positives = 72/183 (39%), Gaps = 12/183 (6%)

Query: 26  CALRSIIAEKRG---LSSLESSLQGEL--------SFQFHCAVEKIKAIKGRVVITGIGK 74
               SI  E+ G   ++ +ES  +  +              A   ++    R+ I GIG 
Sbjct: 70  SVRDSIRTEEEGGELIAEMESIYKAIIGGSRELINQDDIVQAATLLENA-NRIEIYGIGS 128

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG  G ++   L   G        +     +  ++T  D+++ +S SG + +++  +  A
Sbjct: 129 SGLSGQEMKFRLMRMGMRVDCHIDSHTMVMNASLLTAADVVLAISNSGHTVDIQEAVALA 188

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +     +I +T+   + ++  AD++L           G      +I+ +    +L +A  
Sbjct: 189 KENGATVILLTNHEHTPLSEMADLLLLSFSPKPFYARGFLNAQLSIVHVLDLISLVLAQN 248

Query: 195 ESR 197
           E R
Sbjct: 249 EER 251


>gi|253996706|ref|YP_003048770.1| 6-phospho 3-hexuloisomerase [Methylotenera mobilis JLW8]
 gi|253983385|gb|ACT48243.1| 6-phospho 3-hexuloisomerase [Methylotenera mobilis JLW8]
          Length = 179

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 65/173 (37%), Gaps = 8/173 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L S L    + +    ++ ++   GR  I G G+S  +    A  L   G     + 
Sbjct: 9   LDKLTSILAETDNSKSAELLKLVEGA-GRTFIGGAGRSLLVSRFFAMRLVHAGYNVSMIG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL++++S SG ++ L   +  A+     L+ I+ +  S +A  AD
Sbjct: 68  EVVTP-----AIKAGDLLVLVSGSGGTETLLPFVKKAKSVGAKLVVISMKKTSPMADAAD 122

Query: 158 IVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           + + +  +         P  S      L   +A    L+ ++  +E     +H
Sbjct: 123 LTIQIGNDSSFPLTNGMPMGSQFELSTLLFLEATIADLIFAKGLTEEGMRAIH 175


>gi|242398443|ref|YP_002993867.1| hypothetical protein TSIB_0452 [Thermococcus sibiricus MM 739]
 gi|242264836|gb|ACS89518.1| hypothetical protein TSIB_0452 [Thermococcus sibiricus MM 739]
          Length = 185

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 51/140 (36%), Gaps = 17/140 (12%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    +        V    PL   I   + +    + VVD+  +L G IT  D+ +
Sbjct: 41  RYISKVPVKIVMDKDFLTVHPQDPLTHLIRKFTSEETSAI-VVDDEGRLLGFITMKDLLQ 99

Query: 275 NFHKDLN----------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            F                        VED+M+  P  I  +  L  A++L+ +     L 
Sbjct: 100 FFTTPKRYSVVGLGLLKKYTITRASMVEDIMVTKPITIHIEDNLGHAIKLMIETGKHHLP 159

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V+DD +K  G++   D++R 
Sbjct: 160 VIDDEKKVHGLLEVNDIIRL 179


>gi|153003687|ref|YP_001378012.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027260|gb|ABS25028.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
          Length = 603

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 41/113 (36%), Gaps = 6/113 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSV 285
            +   V     + +A   ++E+      V        GI+T+ D  R            V
Sbjct: 157 RTPVRVPPSATVGEAARTMAERCVSSAIV---DSTPPGIVTDRDFARRVLAAGRGPETPV 213

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +V     + +  +T +  A ++L    +  L V       +G+V   DLLRF
Sbjct: 214 LEVASAPARAVPAETPVYEAWRILLDAGVHHLPVTRGDD-IVGVVSSTDLLRF 265


>gi|125716962|ref|YP_001034095.1| RpiR family transcriptional regulator [Streptococcus sanguinis
           SK36]
 gi|125496879|gb|ABN43545.1| Transcriptional regulator, RpiR family (phosphosugar-binding),
           putative [Streptococcus sanguinis SK36]
          Length = 283

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 61/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSFWENQKLNGYYR 277

Query: 219 CASD 222
               
Sbjct: 278 RNIH 281


>gi|119944726|ref|YP_942406.1| nucleotidyltransferase [Psychromonas ingrahamii 37]
 gi|119863330|gb|ABM02807.1| nucleotidyltransferase [Psychromonas ingrahamii 37]
          Length = 641

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 10/139 (7%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI-TILSEKRFGCVAVVD------EGQ 261
            G       +  S V       PLV      I A+  I++ +      + D      EG 
Sbjct: 155 KGKSDSDKALTTSKVKTLLTRAPLVLPRSSTIQAVAQIMASENISAALINDPDAEDEEGS 214

Query: 262 KLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
              GIITE D+  N      ++   +  VM  +   +  +  +  AM L+ ++NI  L +
Sbjct: 215 SFVGIITEHDLCANVIALGLSVDNPISQVMSTDLISLDHNAYIFEAMLLMLRYNIHHLPI 274

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +   +K IG++   D++R+
Sbjct: 275 L-KNKKPIGLIEVADIIRY 292


>gi|328465475|gb|EGF36704.1| hypothetical protein LM1816_06000 [Listeria monocytogenes 1816]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|254459705|ref|ZP_05073121.1| CBS domain protein [Rhodobacterales bacterium HTCC2083]
 gi|206676294|gb|EDZ40781.1| CBS domain protein [Rhodobacteraceae bacterium HTCC2083]
          Length = 144

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---LSVEDVM 289
           VK G  + DA  IL++K+ G V V   G    GI++E DI R       +     V+D M
Sbjct: 18  VKPGSLVRDAAQILAKKQIGTVVVSSSGDTADGILSERDIVRELAAHGASCLAEKVDDYM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                           +  + +     + VV +  + IG++   D+++  +
Sbjct: 78  TSKLVTCKLSDTADSVLHQMTKGRFRHMPVV-EDGQLIGLITLGDVVKARL 127


>gi|121611758|ref|YP_999565.1| nucleotidyl transferase [Verminephrobacter eiseniae EF01-2]
 gi|121556398|gb|ABM60547.1| Nucleotidyl transferase [Verminephrobacter eiseniae EF01-2]
          Length = 351

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMI 290
           ++    P++ AI ++ + +     VVD   +L G + +GD+ R   H       V D+M 
Sbjct: 9   MLPEQAPVLQAIRVIDQAQAKIALVVDAKGRLTGSVVDGDVRRGLLHGHSLQTPVSDIMH 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + P  +   +     +Q ++   I  + ++       G +   DLL
Sbjct: 69  RQPYTLPVGSTRQKILQAMQVLEIKQVPLLSPEGMVTG-IAVHDLL 113


>gi|313608800|gb|EFR84604.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes FSL F2-208]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|240103948|ref|YP_002960257.1| 3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused
           bifuntional enzyme (hps) [Thermococcus gammatolerans
           EJ3]
 gi|239911502|gb|ACS34393.1| 3-hexulose-6-phosphate synthase-6-phospho 3-hexuloisomerase fused
           bifuntional enzyme (hps) [Thermococcus gammatolerans
           EJ3]
          Length = 406

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/198 (19%), Positives = 70/198 (35%), Gaps = 24/198 (12%)

Query: 26  CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAST 85
              ++++     +  +  SL+ E    F  A   I A   ++ I G G+SG +G   A  
Sbjct: 214 TIKKAMLDILDHIKGVAESLKLEQVRGFVDA--MIGA--NKIFIYGAGRSGLVGKAFAMR 269

Query: 86  LASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           L       + V                DL+I +S SG +  +      A+     + AIT
Sbjct: 270 LMHLDFNVYVVGETITP-----AFEPGDLLIAISGSGETQSIVDAARIAKEQGGKIAAIT 324

Query: 146 SENKSVVACHADIVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALA 190
           S   S +   AD+V+ +P   ++                 +AP  +      +   D + 
Sbjct: 325 SYANSTLGKLADVVVEIPGRAKTDVPTDYIARQMLTQYKWIAPMGTLFEDSTMIFLDGII 384

Query: 191 IALLESRNFSENDFYVLH 208
             L+ +   +E D    H
Sbjct: 385 ALLMATFQKTEKDMKRKH 402


>gi|219117105|ref|XP_002179347.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|217409238|gb|EEC49170.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 148

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/118 (22%), Positives = 48/118 (40%), Gaps = 1/118 (0%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +     M     +       P+++ I  + +     V V D+  K  GIIT+ D+ R + 
Sbjct: 1   MLVGHFMTKASDVVTCSEWDPVLNVIDAVLDHNISAVVVNDKTHKPVGIITKTDLVRAYK 60

Query: 278 KDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             +N    V  +M  N + IL+      A + L ++ +   ++VD      GIV   D
Sbjct: 61  NGVNLHQKVGVIMATNLRTILDTCSRDDAAKFLEKNRLHHAIIVDKEGNFAGIVSVWD 118



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 285 VEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V   M K  +     E   +   +  +  HNIS ++V D   K +GI+   DL+R 
Sbjct: 3   VGHFMTKASDVVTCSEWDPVLNVIDAVLDHNISAVVVNDKTHKPVGIITKTDLVRA 58


>gi|194017856|ref|ZP_03056465.1| acetoin utilization protein AcuB [Bacillus pumilus ATCC 7061]
 gi|194010508|gb|EDW20081.1| acetoin utilization protein AcuB [Bacillus pumilus ATCC 7061]
          Length = 213

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 43/112 (38%), Gaps = 9/112 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------HKDLNTLSV 285
           +    + +AI  +S      + +V +   + G++T+ DI             K      V
Sbjct: 15  RKTDTIEEAIKKMSAHHIRHIPIVSDQDSVIGMVTDRDIKNASPSIFETEKRKLFIQRPV 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E++M+           +     +  +H I  L VV    K +GI+   DLLR
Sbjct: 75  EEIMVLETITAHPLDFVEEISSVFFEHGIGCLPVV-RRGKLVGIITKTDLLR 125



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 11/53 (20%), Positives = 27/53 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +E +M ++   + +   +  A++ +  H+I  + +V D    IG+V   D+
Sbjct: 1   MMIEQIMERDVITLRKTDTIEEAIKKMSAHHIRHIPIVSDQDSVIGMVTDRDI 53


>gi|76809618|ref|YP_333236.1| SIS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|76579071|gb|ABA48546.1| SIS domain protein [Burkholderia pseudomallei 1710b]
          Length = 303

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 127 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 182

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 183 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 236

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 237 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 289

Query: 199 FSEND 203
            +  +
Sbjct: 290 LNVEE 294


>gi|37678498|ref|NP_933107.1| putative sugar-phosphate nucleotide transferase [Vibrio vulnificus
           YJ016]
 gi|37197238|dbj|BAC93078.1| putative sugar-phosphate nucleotide transferase [Vibrio vulnificus
           YJ016]
          Length = 353

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 41/106 (38%), Gaps = 2/106 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVED 287
              ++     + +A+ ++  +      VVDE   L+G++T+GDI R           + +
Sbjct: 6   KKAVLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDIRRGLLAGKALETMLSE 65

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           VM + P            +  + + ++  + +VD      G+    
Sbjct: 66  VMNRKPITASVSADRDDLIARMNKSDLLFIPLVDGP-YLAGLATLH 110



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 26/47 (55%), Gaps = 1/47 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           V+  D  +  A++++   ++ V +VVD+     G+V   D+ R G++
Sbjct: 9   VLSPDATIKEALRVIDAESLRVALVVDEKGILQGVVTDGDI-RRGLL 54


>gi|320164547|gb|EFW41446.1| inosine monophosphate dehydrogenase 2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 524

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 59/174 (33%), Gaps = 14/174 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AI +            +LH              V        L
Sbjct: 72  QTPFVSSPMDTVTESEMAINMALMGGIG-----ILHHNCTAEEQAAFVQKVKRYEQGFIL 126

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
                     +   + +   + F  V V D G    +L GIIT  D+        +   +
Sbjct: 127 DPVVMLPTATVAQVLAVKERQGFAGVPVTDTGKMGGRLVGIITSRDVDFIPKDRWSQTLL 186

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +DVM K  +  V      L  A ++L+++    L +V+D  + + ++   DL +
Sbjct: 187 QDVMTKRSDLVVGKAGCSLAEANKILQENKKGKLPIVNDKDELVALISRTDLKK 240


>gi|302677326|ref|XP_003028346.1| hypothetical protein SCHCODRAFT_70336 [Schizophyllum commune H4-8]
 gi|300102034|gb|EFI93443.1| hypothetical protein SCHCODRAFT_70336 [Schizophyllum commune H4-8]
          Length = 551

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 16/172 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  S+ M       +AIA+            V+H      +       V    +    
Sbjct: 69  KTPFISSPMDTVTEGEMAIAMALLGGLG-----VIHHNQSPESQAAMVRAVKRHENGFIS 123

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
              ++     + D + I S   F  + + D G    KL GI+T  D+            +
Sbjct: 124 EPVVLSPTQTVADVLDIKSRLGFCGIPITDTGAVGGKLVGIVTSRDV----QFREENTPL 179

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VM        +   LT A  +LR      L +V++  + + ++   DLL+
Sbjct: 180 SQVMTTELVTAPQGVTLTEANTILRDSKKGKLPIVNNKGELVSLLSRSDLLK 231


>gi|153955415|ref|YP_001396180.1| ABC transporter ATPase [Clostridium kluyveri DSM 555]
 gi|146348273|gb|EDK34809.1| Predicted ABC transporter, ATPase component [Clostridium kluyveri
           DSM 555]
          Length = 375

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ A+ I+       + VV+E   L G++T   I  N  K+     ++D+M      + 
Sbjct: 266 TVVQALEIMKSNHVDSLLVVNENNNLIGLVTLKKIRLNMDKN---KRLKDIMETEVITVS 322

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +  A++ +  + +  + V+DD    +G++    LL
Sbjct: 323 FEDSIVSALEKMEYNKMGYIPVIDDKLTLVGLITRSSLL 361



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 29/50 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +D+MIKNP     +  +  A+++++ +++  L+VV++    IG+V   
Sbjct: 249 KAKDIMIKNPIKSSGERTVVQALEIMKSNHVDSLLVVNENNNLIGLVTLK 298


>gi|77164524|ref|YP_343049.1| peptidase M50 [Nitrosococcus oceani ATCC 19707]
 gi|254433142|ref|ZP_05046650.1| peptidase, M50 family protein [Nitrosococcus oceani AFC27]
 gi|76882838|gb|ABA57519.1| Peptidase M50 [Nitrosococcus oceani ATCC 19707]
 gi|207089475|gb|EDZ66746.1| peptidase, M50 family protein [Nitrosococcus oceani AFC27]
          Length = 404

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 45/115 (39%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                  V     +   +   L         V +E  +L GII+  DI +   +  +  +
Sbjct: 271 MQTDFVKVNPDMRVRTLVEEHLMRSDQRAFPV-EENNRLAGIISIPDIRKISREKWSQTT 329

Query: 285 VEDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++M   +   +         A+ +L + NI+ L VV +  +  G++   DLL+
Sbjct: 330 IGELMTPVRKVALTSPKGGAAEALFILARRNINQLPVV-ENGQIRGLIRREDLLK 383


>gi|46907656|ref|YP_014045.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47092718|ref|ZP_00230504.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217964424|ref|YP_002350102.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes HCC23]
 gi|226224029|ref|YP_002758136.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes Clip81459]
 gi|254824512|ref|ZP_05229513.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|254852529|ref|ZP_05241877.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|254932613|ref|ZP_05265972.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|254992610|ref|ZP_05274800.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes FSL J2-064]
 gi|255522456|ref|ZP_05389693.1| glycine betaine/carnitine/choline ABC transporter (ATP-binding
           protein) [Listeria monocytogenes FSL J1-175]
 gi|284801814|ref|YP_003413679.1| hypothetical protein LM5578_1569 [Listeria monocytogenes 08-5578]
 gi|284994956|ref|YP_003416724.1| hypothetical protein LM5923_1521 [Listeria monocytogenes 08-5923]
 gi|290894097|ref|ZP_06557070.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|300765570|ref|ZP_07075549.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|46880924|gb|AAT04222.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes serotype 4b str. F2365]
 gi|47018906|gb|EAL09653.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes str. 4b H7858]
 gi|217333694|gb|ACK39488.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes HCC23]
 gi|225876491|emb|CAS05200.1| Putative glycine betaine/carnitine/choline ABC transporter
           (ATP-binding protein) [Listeria monocytogenes serotype
           4b str. CLIP 80459]
 gi|258605837|gb|EEW18445.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL R2-503]
 gi|284057376|gb|ADB68317.1| hypothetical protein LM5578_1569 [Listeria monocytogenes 08-5578]
 gi|284060423|gb|ADB71362.1| hypothetical protein LM5923_1521 [Listeria monocytogenes 08-5923]
 gi|290556352|gb|EFD89893.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J2-071]
 gi|293584172|gb|EFF96204.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           HPB2262]
 gi|293593751|gb|EFG01512.1| glycine betaine/L-proline ABC transporter [Listeria monocytogenes
           FSL J1-194]
 gi|300513671|gb|EFK40739.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes FSL N1-017]
 gi|307571011|emb|CAR84190.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria monocytogenes L99]
 gi|328474949|gb|EGF45743.1| hypothetical protein LM220_03087 [Listeria monocytogenes 220]
 gi|332311869|gb|EGJ24964.1| Choline transport ATP-binding protein [Listeria monocytogenes str.
           Scott A]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|303238894|ref|ZP_07325425.1| IMP dehydrogenase [Acetivibrio cellulolyticus CD2]
 gi|302593527|gb|EFL63244.1| IMP dehydrogenase [Acetivibrio cellulolyticus CD2]
          Length = 497

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 68/178 (38%), Gaps = 12/178 (6%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKL 213
           +  V+   K  E       P  SAIMQ    D LAIAL  S    F      +      +
Sbjct: 34  STPVVKFKKGEECELKLNVPIASAIMQSVSNDTLAIALARSGGISFIYGSQSIESQVEMV 93

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEG 270
             +    S  + S  ++ +      L D + + +      VAV ++G    KL GIIT  
Sbjct: 94  KKVKKYKSGFVISDSNLRV---DNSLKDVLELKNRMGHSTVAVTEDGTSTGKLLGIITSR 150

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           D      +      V D M    K+I       L+ A  ++ ++ ++ L +VD  QK 
Sbjct: 151 DYR--VSRTSLEKKVGDFMTPFSKLIVGNLGISLSEANDIIWENKLNCLPIVDKDQKL 206


>gi|295703784|ref|YP_003596859.1| transcriptional regulator [Bacillus megaterium DSM 319]
 gi|294801443|gb|ADF38509.1| transcriptional regulator [Bacillus megaterium DSM 319]
          Length = 604

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/136 (22%), Positives = 54/136 (39%), Gaps = 6/136 (4%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            DF    P                   S  L   G  L +AI +L       + VV   Q
Sbjct: 3   QDFNKYTPFDYNQIKNNELVHRWMRPLSANL-TEGQTLKEAIHLLDMHGIEGLPVVSAQQ 61

Query: 262 KLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           K+ G++T  ++ R+     +    VE+VM  +   +     +  A ++  Q  I  L V+
Sbjct: 62  KVIGVLTTSELLRSLTGCHSLNTKVEEVMKPSINSVSPHDSIDTAWKI--QGGI--LPVI 117

Query: 321 DDCQKAIGIVHFLDLL 336
           D+ +K +G++   D+L
Sbjct: 118 DEKEKLVGLLTKTDIL 133



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/41 (41%), Positives = 21/41 (51%)

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            E   L  A+ LL  H I  L VV   QK IG++   +LLR
Sbjct: 34  TEGQTLKEAIHLLDMHGIEGLPVVSAQQKVIGVLTTSELLR 74


>gi|170291094|ref|YP_001737910.1| CBS domain-containing protein [Candidatus Korarchaeum cryptofilum
           OPF8]
 gi|170175174|gb|ACB08227.1| CBS domain containing protein [Candidatus Korarchaeum cryptofilum
           OPF8]
          Length = 258

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 48/111 (43%), Gaps = 8/111 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS------VE 286
           +  G  +  A+ ++   +   + V   G KL G+++  D+                  + 
Sbjct: 16  IDKGDTVERALDLMERNKISHLIVT-SGDKLVGVLSVRDLMDGLGSSRFERIPARRIYIS 74

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M + P  I +D  +  A +++    IS+L V+ +  K +G++   D++R
Sbjct: 75  ALMSEPPITIEQDADILDAAKVMLDKRISLLPVL-NNGKLVGLITESDIIR 124



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 53/108 (49%), Gaps = 9/108 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
             +    ++    ++DA  ++ +KR   + V++   KL G+ITE DI R      DL++L
Sbjct: 77  MSEPPITIEQDADILDAAKVMLDKRISLLPVLN-NGKLVGLITESDIIRQMELRGDLSSL 135

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +    +PK I+ +  +  A  ++ +    +L VVD   K IG+V 
Sbjct: 136 IKRE----HPK-IMPNERIVHARAIMLERGARILPVVD-SGKLIGLVT 177



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V ++++++   I +   +  A+ L+ ++ IS L+V     K +G++   DL+
Sbjct: 4   KVSEIIVRDIISIDKGDTVERALDLMERNKISHLIVT-SGDKLVGVLSVRDLM 55



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 15/124 (12%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----------- 275
               P +     ++ A  I+ E+    + VVD   KL G++TE  + +            
Sbjct: 137 KREHPKIMPNERIVHARAIMLERGARILPVVD-SGKLIGLVTEMILAKAFFEVRDRIEGT 195

Query: 276 -FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                   + VED+M+++P  +  D       +      +  L VVD  +K IG++    
Sbjct: 196 YMDDVARRVIVEDIMLESPPKLSNDLKNVK--ETFLSTGLPALPVVDSSEKVIGVIERKS 253

Query: 335 LLRF 338
           LLR 
Sbjct: 254 LLRL 257


>gi|15673158|ref|NP_267332.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|12724142|gb|AAK05274.1|AE006350_1 transcriptional regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|326406726|gb|ADZ63797.1| transcription regulator [Lactococcus lactis subsp. lactis CV56]
          Length = 273

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/164 (22%), Positives = 73/164 (44%), Gaps = 2/164 (1%)

Query: 5   FSHFK-SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           FS  K  + ++ +S  ++      L     E++ ++SLE++ + +LS +       + + 
Sbjct: 63  FSDLKIEIAKEDYSQKESQAKDSELFFDEKERKIVNSLETT-KRKLSIELLERSSALLSN 121

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
              + I G+G SG+    L +     G  +  +           ++   DL+I +S SG 
Sbjct: 122 ASAIYIFGVGLSGNTAKDLEAMFLRIGIQAKAISDTHFQAQTAAILKNTDLVIGISLSGR 181

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           + +L   L  A+  +  +++ITS   S +A  +DIVL    E  
Sbjct: 182 TLDLYESLKIAKGHTAKILSITSNLVSPIAQLSDIVLQTTAEEF 225


>gi|219855831|ref|YP_002472953.1| hypothetical protein CKR_2488 [Clostridium kluyveri NBRC 12016]
 gi|219569555|dbj|BAH07539.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 376

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/99 (20%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ A+ I+       + VV+E   L G++T   I  N  K+     ++D+M      + 
Sbjct: 267 TVVQALEIMKSNHVDSLLVVNENNNLIGLVTLKKIRLNMDKN---KRLKDIMETEVITVS 323

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  +  A++ +  + +  + V+DD    +G++    LL
Sbjct: 324 FEDSIVSALEKMEYNKMGYIPVIDDKLTLVGLITRSSLL 362



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 29/50 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +D+MIKNP     +  +  A+++++ +++  L+VV++    IG+V   
Sbjct: 250 KAKDIMIKNPIKSSGERTVVQALEIMKSNHVDSLLVVNENNNLIGLVTLK 299


>gi|116695154|ref|YP_840730.1| transcriptional regulator [Ralstonia eutropha H16]
 gi|113529653|emb|CAJ96000.1| transcriptional regulator [Ralstonia eutropha H16]
          Length = 301

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/159 (22%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
                 L++LE +     + +   A   +   +        G S  +  +    LA  G 
Sbjct: 103 SIHADILTALEVNRGMMDAQRIEQAARLLLGARMVYAFGMGGGSSFMADEARHRLARLGQ 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P      A         + RDD+++  S SG   E+ A    AR +   L+A+T+   S 
Sbjct: 163 PVASYQDALLQKMVAATLGRDDVVLAFSASGRVPEMLASCDIAREYGARLVAVTA-LGSP 221

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +A  AD++L  P           P+ S    L + D LA
Sbjct: 222 LAARADVLL--PVRTLETDFIFKPSASRYAMLMVLDVLA 258


>gi|110835418|ref|YP_694277.1| CBS domain-containing protein [Alcanivorax borkumensis SK2]
 gi|110648529|emb|CAL18005.1| CBS domain protein, putative [Alcanivorax borkumensis SK2]
          Length = 135

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/127 (19%), Positives = 51/127 (40%), Gaps = 6/127 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +    +M        +++G  L + + +L + +F  + VVD   K+ G ++E D  R 
Sbjct: 2   QEMTVRALMAKHPMA--IEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLRR 59

Query: 276 F----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                +    +L VE+ M   P  + E+       +L+      +  VV+      G++ 
Sbjct: 60  LLISSYHCEGSLVVEEFMHDQPLTVSEEDSAVNVAELMVTQKPKIYPVVNAQGVLTGLLT 119

Query: 332 FLDLLRF 338
              +LR 
Sbjct: 120 REQVLRA 126



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/58 (36%), Positives = 30/58 (51%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  ++V  +M K+P  I   T LT  + +L QH  + L VVD   K +G V   D LR
Sbjct: 1   MQEMTVRALMAKHPMAIEMGTELTEVVDVLLQHKFTGLPVVDSQNKVVGFVSEQDCLR 58


>gi|239993586|ref|ZP_04714110.1| DNA-binding transcriptional regulator HexR [Alteromonas macleodii
           ATCC 27126]
          Length = 283

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 51/139 (36%), Gaps = 3/139 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 124 LLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  I   AR     ++ ITS   S +A     VL+L    ++  +   P  S 
Sbjct: 184 HTGRTKSLVEIAQIARMNDATVVGITS-ADSPLAQECSYVLSLEVPEDTDMY--MPMASR 240

Query: 180 IMQLAIGDALAIALLESRN 198
           I QL + D LA      R 
Sbjct: 241 IAQLTLIDVLATGFTLRRG 259


>gi|255658757|ref|ZP_05404166.1| 3-hexulose-6-phosphate isomerase [Mitsuokella multacida DSM 20544]
 gi|260849152|gb|EEX69159.1| 3-hexulose-6-phosphate isomerase [Mitsuokella multacida DSM 20544]
          Length = 179

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           ++     R+ + G G+SG +    A  L   G  SF V            + + DL++V 
Sbjct: 28  QLLQTHPRIFVCGTGRSGLMLKTFAMRLMQLGFTSFVVGETTTP-----SVQKGDLLLVA 82

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP--HGLAPT 176
           S SG +  +      AR   + +I++T+  KS ++      L L    +       + P 
Sbjct: 83  SASGETGSVVQAAEKARATGVTVISLTASEKSSLSAIVPPFLLLDAGTKFAHSEASVQPL 142

Query: 177 TSAIMQLAIGDALAIALLESRN 198
            S   Q+ +    A+ L  SR+
Sbjct: 143 GSLFEQMLLVYFDAVVLRMSRD 164


>gi|224499719|ref|ZP_03668068.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria monocytogenes Finland 1988]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|239631063|ref|ZP_04674094.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239527346|gb|EEQ66347.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 280

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 3/154 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      ++  D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 163 DYHMQLMAATHLSPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
                  E            + I +++I D L +
Sbjct: 223 AAFVAVAEESRYRTEAL--HALIAEISIMDTLFM 254


>gi|160944711|ref|ZP_02091938.1| hypothetical protein FAEPRAM212_02225 [Faecalibacterium prausnitzii
           M21/2]
 gi|158443895|gb|EDP20899.1| hypothetical protein FAEPRAM212_02225 [Faecalibacterium prausnitzii
           M21/2]
 gi|295104334|emb|CBL01878.1| Transcriptional regulators [Faecalibacterium prausnitzii SL3/3]
          Length = 281

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 66/176 (37%), Gaps = 3/176 (1%)

Query: 30  SIIAEKRGL--SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++      L  +++  +           AV  + + + +V   G G S     ++ +  A
Sbjct: 95  TLCEHASALFMTAINGTQNALSPQAVDQAVALLHSAR-QVFCMGQGGSMAAAKEICARFA 153

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
                   V  +        ++T  D+++ +S+SG++ +L   L  A+     +I IT  
Sbjct: 154 CITNKFRAVADSHMQVMAASLMTEQDVVLFVSYSGATRDLMETLRTAKANGAKIILITHY 213

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
             S  A  ADIVL    +      G  P   A++ +A    L   L +    +E  
Sbjct: 214 EDSPGAKLADIVLLCGAQESPLDSGSIPIKVAVLYVAEVLVLRYILDDKPGSTEAQ 269


>gi|11497827|ref|NP_069049.1| hypothetical protein AF0211 [Archaeoglobus fulgidus DSM 4304]
 gi|2650431|gb|AAB91022.1| conserved hypothetical protein [Archaeoglobus fulgidus DSM 4304]
          Length = 393

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             +V    K  G+I   D       +   + V +VM      +        A+ ++R H 
Sbjct: 106 FVIVQIDDKRVGVIYINDFLSALKDEFKDVKVREVMNPEVITVRRFDSAAKALSVMRTHG 165

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           I  ++VVD+  K IGI+   D++
Sbjct: 166 IDRVVVVDENNKVIGILTGKDVV 188



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 52/142 (36%), Gaps = 16/142 (11%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            L   F            +  V+       A++++       V VVDE  K+ GI+T  D
Sbjct: 127 ALKDEFKDVKVREVMNPEVITVRRFDSAAKALSVMRTHGIDRVVVVDENNKVIGILTGKD 186

Query: 272 I--------FRNFHKDLN-------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           +         R    D +       ++ VE +M      +  +  +   + L+ ++ IS 
Sbjct: 187 VVDRVISPRKRARMGDSSGEKEKTLSIMVESIMSSPVVSVSRNDSVAEVIDLMVENRISS 246

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
            +VV       GIV   D+L +
Sbjct: 247 -VVVTRDGLPDGIVIKKDILEY 267


>gi|21226935|ref|NP_632857.1| hypothetical protein MM_0833 [Methanosarcina mazei Go1]
 gi|20905245|gb|AAM30529.1| conserved protein [Methanosarcina mazei Go1]
          Length = 198

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 64/158 (40%), Gaps = 29/158 (18%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
              F+     G  G L++   ++M     +  V    P+ +  ++ ++  +  + VV++ 
Sbjct: 41  AEAFFESIVRGSEGCLWMTIEELM--TRDLVTVNEDAPVEEVFSLFAKNPYHTLPVVNKK 98

Query: 261 QKLKGIITEGDI--------------------FRNFHKDLNTLSVEDVMIKNPKVILEDT 300
            +L G+I + DI                     R+  ++      +++MI +P  I  ++
Sbjct: 99  GELAGVI-DLDIVLEILLLCLMPRAKYTPLAARRSLGEN-----AKEIMITHPVTISLNS 152

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L     L+ ++    + V  +  K +GI+   DL++ 
Sbjct: 153 TLKDVSDLMMKNRFDRVYV-SENGKLVGIISKRDLVKE 189



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 3/74 (4%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
               P     +L   A ++M +      + +   L D   ++ + RF  V V  E  KL 
Sbjct: 122 AKYTPLAARRSLGENAKEIMITHPVT--ISLNSTLKDVSDLMMKNRFDRVYVS-ENGKLV 178

Query: 265 GIITEGDIFRNFHK 278
           GII++ D+ +   +
Sbjct: 179 GIISKRDLVKEICR 192


>gi|16800535|ref|NP_470803.1| hypothetical protein lin1467 [Listeria innocua Clip11262]
 gi|16413940|emb|CAC96698.1| opuCA [Listeria innocua Clip11262]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|303244819|ref|ZP_07331148.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
 gi|302484860|gb|EFL47795.1| putative signal transduction protein with CBS domains
           [Methanothermococcus okinawensis IH1]
          Length = 133

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/120 (20%), Positives = 54/120 (45%), Gaps = 8/120 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG--QKLKGIITEGDIFRN-FHKDLNT 282
               +  +     L  A  ++ +K    + V D G   K+ G+I+  D+     +K ++ 
Sbjct: 7   MNPMVYKISKNESLYKAFKLMKDKGIKRIFVEDNGKSGKIIGVISYRDLVNIIMNKSISE 66

Query: 283 L-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L      + ++  K    I E+  +  A +++   +I+ L+VVD+    +G++   D+LR
Sbjct: 67  LLNINGKIGNIATKEILKINENDDIKDAAKIMVHADITALLVVDNNGACVGVISQTDILR 126



 Score = 42.6 bits (99), Expect = 0.082,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLL 336
           + V++ M      I ++  L  A +L++   I  + V D+    K IG++ + DL+
Sbjct: 1   MKVKEAMNPMVYKISKNESLYKAFKLMKDKGIKRIFVEDNGKSGKIIGVISYRDLV 56



 Score = 37.2 bits (85), Expect = 4.0,   Method: Composition-based stats.
 Identities = 12/47 (25%), Positives = 20/47 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +     + DA  I+       + VVD      G+I++ DI R   K+
Sbjct: 85  INENDDIKDAAKIMVHADITALLVVDNNGACVGVISQTDILRVIVKN 131


>gi|254391516|ref|ZP_05006717.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
 gi|197705204|gb|EDY51016.1| CBS domain-containing protein [Streptomyces clavuligerus ATCC
           27064]
          Length = 160

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 51/117 (43%), Gaps = 5/117 (4%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +      A D+MH+G     +     L  A  ++ E   G + + D  ++L GI+T+ DI
Sbjct: 46  VRPTMTTAKDIMHAG--AQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDI 103

Query: 273 FR---NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                    D + ++  D+    P+ I   + +   +Q +  H I  L V+++ ++ 
Sbjct: 104 VVGCVAVGHDPSKVTAGDLARGTPRWIDAGSGVEDVLQEMEGHQIRRLPVIENKRRI 160



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M    + I     L  A QL+R+  +  L + D  ++  GI+   D++
Sbjct: 51  TTAKDIMHAGAQWIPAHETLDRAAQLMRELGVGALPIADSNERLCGILTDRDIV 104


>gi|167584761|ref|ZP_02377149.1| hypothetical protein BuboB_05471 [Burkholderia ubonensis Bu]
          Length = 230

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 45/130 (34%), Gaps = 27/130 (20%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS---------- 284
               + DA  +  +     + VVD   ++ GI+++GD+                      
Sbjct: 16  PDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLLHRAENGTGHGKRPWWLEFLLS 75

Query: 285 ----------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                           V DVM      I ED  L     L+ + ++  + V+ +  K +G
Sbjct: 76  SPREQAARYVKEHGRLVGDVMSNQVISISEDMPLDQIADLMERRHLKRVPVLTE-GKLVG 134

Query: 329 IVHFLDLLRF 338
           IV   +L+R 
Sbjct: 135 IVSRSNLIRA 144



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M  +      D  +  A +L   H+IS + VVD   + +GIV   DLL
Sbjct: 1   MRALDIMTPSVVTATPDMTIHDAARLFVDHHISGMPVVDATGQVVGIVSQGDLL 54


>gi|167623878|ref|YP_001674172.1| DNA-binding transcriptional regulator HexR [Shewanella halifaxensis
           HAW-EB4]
 gi|167353900|gb|ABZ76513.1| transcriptional regulator, RpiR family [Shewanella halifaxensis
           HAW-EB4]
          Length = 284

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSIDTAAINKAVDVLTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVISF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIDIAKLARENGAAVIGITAR-NSPLSTVC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL I D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVIIDVLATGFTLRRG 259


>gi|78062487|ref|YP_372395.1| CBS domain-containing protein [Burkholderia sp. 383]
 gi|77970372|gb|ABB11751.1| CBS domain containing membrane protein [Burkholderia sp. 383]
          Length = 143

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 47/117 (40%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTL 283
               +  V     +  A  ++     G + V D G +L  I+T+ D+      H   +  
Sbjct: 8   MSRDVVCVAPTDTIRHAAELMRRFDIGVLPVCD-GPELVAIVTDRDLAMRGLSHGHSSDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V  +  +  +ED  +    Q +    +  L V+D  ++ +GIV   D+  R G
Sbjct: 67  PVQAVASRPVQWCVEDDGVGDVQQRMADVQLHRLPVLDRNRRLVGIVSLGDIATRAG 123



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           V ++M ++   +     +  A +L+R+ +I VL V D  +  + IV   DL   G+
Sbjct: 4   VTEIMSRDVVCVAPTDTIRHAAELMRRFDIGVLPVCDGPE-LVAIVTDRDLAMRGL 58


>gi|53719602|ref|YP_108588.1| putative transcriptional regulatory protein [Burkholderia
           pseudomallei K96243]
 gi|67642667|ref|ZP_00441420.1| transcriptional regulator, RpiR family [Burkholderia mallei GB8
           horse 4]
 gi|121599063|ref|YP_992779.1| RpiR family transcriptional regulator [Burkholderia mallei SAVP1]
 gi|124385575|ref|YP_001026431.1| RpiR family transcriptional regulator [Burkholderia mallei NCTC
           10229]
 gi|126440568|ref|YP_001058700.1| RpiR family transcriptional regulator [Burkholderia pseudomallei
           668]
 gi|126448615|ref|YP_001080296.1| RpiR family transcriptional regulator [Burkholderia mallei NCTC
           10247]
 gi|126451672|ref|YP_001065952.1| RpiR family transcriptional regulator [Burkholderia pseudomallei
           1106a]
 gi|134282809|ref|ZP_01769512.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           305]
 gi|167001562|ref|ZP_02267357.1| transcriptional regulator, RpiR family [Burkholderia mallei PRL-20]
 gi|167719912|ref|ZP_02403148.1| SIS domain protein [Burkholderia pseudomallei DM98]
 gi|167738911|ref|ZP_02411685.1| SIS domain protein [Burkholderia pseudomallei 14]
 gi|167824504|ref|ZP_02455975.1| SIS domain protein [Burkholderia pseudomallei 9]
 gi|167846040|ref|ZP_02471548.1| SIS domain protein [Burkholderia pseudomallei B7210]
 gi|167894612|ref|ZP_02482014.1| SIS domain protein [Burkholderia pseudomallei 7894]
 gi|167911254|ref|ZP_02498345.1| SIS domain protein [Burkholderia pseudomallei 112]
 gi|217423818|ref|ZP_03455319.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           576]
 gi|226192957|ref|ZP_03788569.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237811964|ref|YP_002896415.1| SIS domain protein [Burkholderia pseudomallei MSHR346]
 gi|242316849|ref|ZP_04815865.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106b]
 gi|254177577|ref|ZP_04884232.1| transcriptional regulator, RpiR family [Burkholderia mallei ATCC
           10399]
 gi|254188541|ref|ZP_04895052.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|254197947|ref|ZP_04904369.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           S13]
 gi|254199582|ref|ZP_04905948.1| transcriptional regulator, RpiR family [Burkholderia mallei FMH]
 gi|254205901|ref|ZP_04912253.1| transcriptional regulator, RpiR family [Burkholderia mallei JHU]
 gi|254260238|ref|ZP_04951292.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1710a]
 gi|254297884|ref|ZP_04965337.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           406e]
 gi|254358701|ref|ZP_04974974.1| transcriptional regulator, RpiR family [Burkholderia mallei
           2002721280]
 gi|52210016|emb|CAH35989.1| putative transcriptional regulatory protein [Burkholderia
           pseudomallei K96243]
 gi|121227873|gb|ABM50391.1| transcriptional regulator, RpiR family [Burkholderia mallei SAVP1]
 gi|124293595|gb|ABN02864.1| transcriptional regulator, RpiR family [Burkholderia mallei NCTC
           10229]
 gi|126220061|gb|ABN83567.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           668]
 gi|126225314|gb|ABN88854.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106a]
 gi|126241485|gb|ABO04578.1| transcriptional regulator, RpiR family [Burkholderia mallei NCTC
           10247]
 gi|134245895|gb|EBA45986.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           305]
 gi|147749178|gb|EDK56252.1| transcriptional regulator, RpiR family [Burkholderia mallei FMH]
 gi|147753344|gb|EDK60409.1| transcriptional regulator, RpiR family [Burkholderia mallei JHU]
 gi|148027828|gb|EDK85849.1| transcriptional regulator, RpiR family [Burkholderia mallei
           2002721280]
 gi|157807096|gb|EDO84266.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           406e]
 gi|157936220|gb|EDO91890.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pasteur 52237]
 gi|160698616|gb|EDP88586.1| transcriptional regulator, RpiR family [Burkholderia mallei ATCC
           10399]
 gi|169654688|gb|EDS87381.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           S13]
 gi|217393676|gb|EEC33697.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           576]
 gi|225935047|gb|EEH31022.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           Pakistan 9]
 gi|237503841|gb|ACQ96159.1| SIS domain protein [Burkholderia pseudomallei MSHR346]
 gi|238523854|gb|EEP87290.1| transcriptional regulator, RpiR family [Burkholderia mallei GB8
           horse 4]
 gi|242140088|gb|EES26490.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1106b]
 gi|243062668|gb|EES44854.1| transcriptional regulator, RpiR family [Burkholderia mallei PRL-20]
 gi|254218927|gb|EET08311.1| transcriptional regulator, RpiR family [Burkholderia pseudomallei
           1710a]
          Length = 293

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|328880438|emb|CCA53677.1| CBS domain protein [Streptomyces venezuelae ATCC 10712]
          Length = 147

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 45/110 (40%), Gaps = 4/110 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLS 284
                  V     L DA  ++ + R G + +  +  KLKG++T+ DI         +   
Sbjct: 13  MTAGTQCVGEHESLQDAARMMRDMRVGAMPICGDDDKLKGMVTDRDIVVECVAAGDDPAQ 72

Query: 285 VEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVH 331
           VE   +      I  +   T A+ ++ +H +  L V+D  D  +  G++ 
Sbjct: 73  VECGSLGGELHWIDAEASATDALHVMEEHQVKRLPVIDVQDGHRLCGMIS 122



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L   D+M    + + E   L  A +++R   +  + +  D  K  G+V   D++
Sbjct: 7   LKARDIMTAGTQCVGEHESLQDAARMMRDMRVGAMPICGDDDKLKGMVTDRDIV 60


>gi|313618938|gb|EFR90789.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria innocua FSL S4-378]
 gi|313623785|gb|EFR93917.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Listeria innocua FSL J1-023]
          Length = 397

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|218890624|ref|YP_002439488.1| DNA-binding transcriptional regulator HexR [Pseudomonas aeruginosa
           LESB58]
 gi|218770847|emb|CAW26612.1| probable transcriptional regulator [Pseudomonas aeruginosa LESB58]
          Length = 285

 Score = 68.4 bits (166), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 67/161 (41%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ +         AV+ +   + ++   G+G S  +                   
Sbjct: 104 IASLDSAHKLLDPRVIDRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAQA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +V+S++G + EL  + + AR+    ++ +T+   S +A  + 
Sbjct: 163 DVLMQRMIASVAHTGDLFVVISYTGRTRELVEVAHLARQNGASVLGLTA-AGSPLARAST 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 LCLDIPLPEDTDIY--MPMTSRIVQLTVLDVLATGVTLRRG 260


>gi|328951320|ref|YP_004368655.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Marinithermus hydrothermalis DSM
           14884]
 gi|328451644|gb|AEB12545.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Marinithermus hydrothermalis DSM
           14884]
          Length = 602

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/92 (19%), Positives = 33/92 (35%), Gaps = 5/92 (5%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVE 286
               V     + +A   + E R   V V     +  GI+T+ D+  R   + L     V 
Sbjct: 156 PPVFVPAEATVGEAARRMREHRISSVLV---AGEALGILTDRDLRNRVLARGLGAATPVR 212

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            VM    K +   + +  A++ +    +  L 
Sbjct: 213 AVMTAPAKTLPAGSSVFEALEFMLAEGVHHLP 244


>gi|307595707|ref|YP_003902024.1| putative CBS domain-containing signal transduction protein
           [Vulcanisaeta distributa DSM 14429]
 gi|307550908|gb|ADN50973.1| putative signal transduction protein with CBS domains [Vulcanisaeta
           distributa DSM 14429]
          Length = 146

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 2/112 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSV 285
                ++     + DAI ++  +    + VVD+G K  GI+T  DI R   K     +SV
Sbjct: 10  RRKEVIINAKASVRDAIELMIRENTDYLLVVDDGGKAVGIVTASDILRTIGKVGNLNVSV 69

Query: 286 EDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 N    +     +  A  L+ ++ +  L+VVDD     G++   D++
Sbjct: 70  GQCCSFNRLVSVRLSDSIYRAAMLMSEYGVKHLLVVDDRGNPCGVLTSDDVI 121



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + +V+ V+ +   +I     +  A++L+ + N   L+VVDD  KA+GIV   D+LR
Sbjct: 2   STTVDKVLRRKEVIINAKASVRDAIELMIRENTDYLLVVDDGGKAVGIVTASDILR 57



 Score = 36.8 bits (84), Expect = 4.6,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 31/67 (46%), Gaps = 1/67 (1%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
           +L   GK+G L V       S + +  V++   +  A  ++SE     + VVD+     G
Sbjct: 55  ILRTIGKVGNLNVSVGQCC-SFNRLVSVRLSDSIYRAAMLMSEYGVKHLLVVDDRGNPCG 113

Query: 266 IITEGDI 272
           ++T  D+
Sbjct: 114 VLTSDDV 120


>gi|297578751|ref|ZP_06940679.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae RC385]
 gi|297536345|gb|EFH75178.1| DNA-binding transcriptional regulator HexR [Vibrio cholerae RC385]
          Length = 274

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 4/140 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           Q + AV+ +   K R+   G+G S  +     +       P                 T 
Sbjct: 139 QINRAVDLLTQAK-RISFFGLGASSAVARDAQNKFIRFNIPISCFEDIVMQRMSCINCTD 197

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+I+++S +G +     I   AR     +IAIT++  S +   + + + L    ++  +
Sbjct: 198 NDVIVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDKASSLSICLDVPEDTDVY 256

Query: 172 GLAPTTSAIMQLAIGDALAI 191
              P  S ++Q+ + D + I
Sbjct: 257 --MPMASRVVQMTVIDVIVI 274


>gi|220916635|ref|YP_002491939.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
 gi|219954489|gb|ACL64873.1| CBS domain containing protein [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 147

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              +   ++    +I+AI +L EK    + V+    +L G++TE  +F            
Sbjct: 12  MTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVTEKMLFGYMPAKATTLDQ 70

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+   V   M   P  +  DT L  A +LL    ++ ++VV+      G++   
Sbjct: 71  WELHYLLSKTPVRAAMNPAPHTVHPDTPLAEAARLLHDRKLNGVLVVNAQGDLQGLLTTT 130

Query: 334 DLLRF 338
           + L  
Sbjct: 131 NALEA 135



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            L+V D M KNP  I +++ +  A+ LL++ NI  L V+    + +G+V 
Sbjct: 5   KLTVGDWMTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVT 53


>gi|332141738|ref|YP_004427476.1| DNA-binding transcriptional regulator HexR [Alteromonas macleodii
           str. 'Deep ecotype']
 gi|327551760|gb|AEA98478.1| DNA-binding transcriptional regulator HexR [Alteromonas macleodii
           str. 'Deep ecotype']
          Length = 283

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 52/139 (37%), Gaps = 3/139 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 124 LLTQAQKISFFGLGASASVAHDALNKFFRFNVPVVYFEDILMQRMSCMNCSAGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  I   AR     ++ ITS  +S +A     VL+L    ++  +   P  S 
Sbjct: 184 HTGRTKSLVEIAQIARMNDATVVGITS-AESPLAQECSYVLSLEVPEDTDMY--MPMASR 240

Query: 180 IMQLAIGDALAIALLESRN 198
           I QL + D LA      R 
Sbjct: 241 IAQLTLIDVLATGFTLRRG 259


>gi|329896320|ref|ZP_08271443.1| Phosphogluconate repressor HexR, RpiR family [gamma proteobacterium
           IMCC3088]
 gi|328921844|gb|EGG29214.1| Phosphogluconate repressor HexR, RpiR family [gamma proteobacterium
           IMCC3088]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 57/162 (35%), Gaps = 7/162 (4%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            LS +  S+   L       V+++   + R+   G+G S  + +          TP    
Sbjct: 106 ALSLVRDSINPAL---VARVVDQLVQAR-RIYFFGLGTSAAVATDAEYKFFRFNTPVSSH 161

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H               DL   +S +G +  L      AR     ++ +T+   S ++   
Sbjct: 162 HDPLMQRMLASAGGVGDLFFCISHTGRTKTLIETAQLARENGATVVGLTA-PNSALSQAC 220

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              L L    ++  +   P TS I+ L + D LA  +   + 
Sbjct: 221 QWALELDVPEDTDEY--LPMTSRIVHLVVLDVLATGVTLRKG 260


>gi|261251758|ref|ZP_05944332.1| sialic acid utilization regulator RpiR family [Vibrio orientalis
           CIP 102891]
 gi|260938631|gb|EEX94619.1| sialic acid utilization regulator RpiR family [Vibrio orientalis
           CIP 102891]
          Length = 277

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 67/162 (41%), Gaps = 3/162 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           I+ +  + SL+ + +           E + + +  +   G+G S  +G  LA  L   G 
Sbjct: 96  ISAQSAVDSLQDTAKLIDRKSLMRICELVHSAR-FIGCVGVGASSIVGRYLAYRLVRIGK 154

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +        +    G     D+   +S SGS+ E+      A R  +P++++T+ + S 
Sbjct: 155 KAIMYEDTHLAAMSAGRSDSGDMWFSVSSSGSTKEVIHAATQAHRRGVPVVSLTNISHSP 214

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           ++  +D  L +   PE    G A  +  +  L + DAL   L
Sbjct: 215 LSAISDE-LLVAARPEGPLTGGAFASK-VGALLLVDALINTL 254


>gi|116872861|ref|YP_849642.1| glycine betaine/L-proline ABC transporter, ATP- binding protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
 gi|116741739|emb|CAK20863.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Listeria welshimeri serovar 6b str. SLCC5334]
          Length = 397

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I   D+ +         SV
Sbjct: 255 MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI---DVEQIDLNRRTATSV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D++ KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 312 MDIIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 240 RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 296


>gi|49487231|ref|YP_044452.1| putative glycine betaine/carnitine/choline transport ATP-binding
           protein [Staphylococcus aureus subsp. aureus MSSA476]
 gi|49245674|emb|CAG44153.1| putative glycine betaine/carnitine/choline transport ATP-binding
           protein [Staphylococcus aureus subsp. aureus MSSA476]
          Length = 408

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 245 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGI 304

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  ++ D+M ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++      
Sbjct: 305 RG---HKTLRDMMQQHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLIT----- 356

Query: 337 RFGII 341
           R  ++
Sbjct: 357 RANVV 361



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 240 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIE 298

Query: 334 DL 335
           D+
Sbjct: 299 DI 300


>gi|186685040|ref|YP_001868236.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
 gi|186467492|gb|ACC83293.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
          Length = 1298

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/131 (24%), Positives = 58/131 (44%), Gaps = 25/131 (19%)

Query: 233 VKIGCPLIDAITILSE---------------------KRFGCVAVVDEGQKLKGIITEGD 271
           + I   +++AI ++S+                     +       V E  +L GI TE D
Sbjct: 24  ISIDSFVVEAIALMSQEPASNYAPISLNSSLDLGFRTQPLTSCIFVLEAGRLLGIFTEKD 83

Query: 272 IFRNFHK--DLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAI 327
           + R      DL+TL++ +VM +    + +     + +A+ LLRQH    L V++D  + +
Sbjct: 84  VIRLIASGVDLSTLTMAEVMTQPVVTLRQSDSNDIFIALSLLRQHQTDYLPVLNDRGQLL 143

Query: 328 GIVHFLDLLRF 338
           GI+    LL+ 
Sbjct: 144 GIITQTSLLQA 154


>gi|257077218|ref|ZP_05571579.1| inosine-5'-monophosphate dehydrogenase [Ferroplasma acidarmanus
           fer1]
          Length = 140

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 53/116 (45%), Gaps = 5/116 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDLNT 282
              +  ++      ++    ++  R G   +V +G+  +GI+TE D      +   D + 
Sbjct: 9   MRKNCQIINGNTSALEGSKHMAANREG-YIIVGDGKIPEGIVTEWDYINKVLSLEADPSR 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++D+M      +  DT +     L+ +  I  L+V+D+  K  GI+   D+++F
Sbjct: 68  VLLKDIMTAPLTSVTSDTPMEKVASLMAKKAIRRLLVIDN-NKLSGIITSRDIIKF 122



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
           V    P+    +++++K    + V+D   KL GIIT  DI + F++ +  +
Sbjct: 81  VTSDTPMEKVASLMAKKAIRRLLVID-NNKLSGIITSRDIIKFFNEYVEDM 130


>gi|325292863|ref|YP_004278727.1| CBS domain-containing membrane protein [Agrobacterium sp. H13-3]
 gi|325060716|gb|ADY64407.1| CBS domain-containing membrane protein [Agrobacterium sp. H13-3]
          Length = 382

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/145 (15%), Positives = 53/145 (36%), Gaps = 20/145 (13%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                 +           +  V     L  A +++    F  + V ++  ++ GI+T+ D
Sbjct: 228 SWRRRALHIDCASVMSRDVVGVAPDDSLRHAHSLMHNHHFKALPVTNDRAEIVGIVTQTD 287

Query: 272 IF-----RNFHKDLNTL---------------SVEDVMIKNPKVILEDTLLTVAMQLLRQ 311
                  R+    + +L               +V+D+M    + +  +T +  A+    +
Sbjct: 288 FLEKASWRHGRPSIGSLQRLRLILSGASAPNDTVKDIMTSPVRTVQPETAIEEAIIRFAE 347

Query: 312 HNISVLMVVDDCQKAIGIVHFLDLL 336
             +  L V+D   K +GI+   D++
Sbjct: 348 EGLHYLPVIDANGKMVGILSQSDVM 372



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V+    + +AI   +E+    + V+D   K+ GI+++ D+      D
Sbjct: 325 MTSPVRTVQPETAIEEAIIRFAEEGLHYLPVIDANGKMVGILSQSDVMVAMLAD 378


>gi|320160311|ref|YP_004173535.1| putative sugar isomerase [Anaerolinea thermophila UNI-1]
 gi|319994164|dbj|BAJ62935.1| putative sugar isomerase [Anaerolinea thermophila UNI-1]
          Length = 338

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 77/194 (39%), Gaps = 6/194 (3%)

Query: 52  QFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
                V ++++ +  RVV+TG+G S +    L   L   G  + +V   E  H     + 
Sbjct: 26  SLEQVVHRLRSGEYRRVVLTGMGSSLYALIPLWYRLLDAGIQTLWVETGELLHYGAEWVK 85

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
            +DL++V+S SG S E+  ++   +R   P++ +T+  +S +A  A+ ++      E+  
Sbjct: 86  PEDLLVVVSQSGRSAEVVELI---KRNPSPILGVTNTPESPLAQTAETLVLTDAGEEATV 142

Query: 171 HGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
                  +      +G+A      L   R      F +     ++       + ++   +
Sbjct: 143 SCKTYVATLTSLALLGEAFLGNDLLQLQRGLEATAFQMEAYLSRVDDHVNHLAGILQGIE 202

Query: 229 SIPLVKIGCPLIDA 242
            +     G  L  A
Sbjct: 203 HVIYAGRGVSLASA 216


>gi|313650651|gb|EFS15053.1| helix-turn-helix domain, rpiR family protein [Shigella flexneri 2a
           str. 2457T]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        +  V+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRTVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|295095550|emb|CBK84640.1| Transcriptional regulators [Enterobacter cloacae subsp. cloacae
           NCTC 9394]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V     +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVDEDDSVDAYTAKIFESAMATLDHVRQSLDMS---SVNRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K R+   G+G S  +     +       P  +              + DD+++++S
Sbjct: 125 LTQAK-RIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCSEDDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +     +   AR     +IA+T+   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKSQVELAQLARDNDAMVIALTT-AGTPLAREATLAITLDVPEDTDMY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|254168446|ref|ZP_04875290.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197622501|gb|EDY35072.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 184

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNT 282
               +  +     +  A  ++ E     + VVD+  K+ G+ITE DI   + K    +  
Sbjct: 72  MNKDVIFLSPKDRVKKARELMKEHGISQIPVVDK-GKVVGMITEDDILEGYEKHGAGIVD 130

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L VEDVM   P  +  DT +   ++LLRQ     L+VV++  K +GI+   D++  G
Sbjct: 131 LLVEDVMSSPPIAVRGDTRMDAIVELLRQEQ--ALLVVEND-KLVGIITKADIVYKG 184



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 7/65 (10%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR----- 337
              +D+M K+   +     +  A +L+++H IS + VVD   K +G++   D+L      
Sbjct: 66  KKAKDLMNKDVIFLSPKDRVKKARELMKEHGISQIPVVDK-GKVVGMITEDDILEGYEKH 124

Query: 338 -FGII 341
             GI+
Sbjct: 125 GAGIV 129


>gi|191637050|ref|YP_001986216.1| Gluconate operon transcriptional regulator, RpiR family
           [Lactobacillus casei BL23]
 gi|301065384|ref|YP_003787407.1| transcriptional regulator [Lactobacillus casei str. Zhang]
 gi|190711352|emb|CAQ65358.1| Gluconate operon transcriptional regulator, RpiR family
           [Lactobacillus casei BL23]
 gi|300437791|gb|ADK17557.1| Transcriptional regulator [Lactobacillus casei str. Zhang]
 gi|327381077|gb|AEA52553.1| Hex regulon repressor [Lactobacillus casei LC2W]
 gi|327384252|gb|AEA55726.1| Hex regulon repressor [Lactobacillus casei BD-II]
          Length = 280

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 57/154 (37%), Gaps = 3/154 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      ++  D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 163 DYHMQLMAATHLSPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
                  E            + I +++I D L +
Sbjct: 223 AAFVAVAEESRYRTEAL--HALIAEISIMDTLFM 254


>gi|302867905|ref|YP_003836542.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315505690|ref|YP_004084577.1| cbs domain containing membrane protein [Micromonospora sp. L5]
 gi|302570764|gb|ADL46966.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315412309|gb|ADU10426.1| CBS domain containing membrane protein [Micromonospora sp. L5]
          Length = 232

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/132 (21%), Positives = 48/132 (36%), Gaps = 20/132 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN---- 281
               +  V    P  + + +L  +R   V VVD  +++ G+I+E D+     +  +    
Sbjct: 10  MTRDVATVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADLLHKVERSGHPDER 69

Query: 282 ----------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                            L   D+M        E   L    +L+    +  L V+DD  +
Sbjct: 70  RVFEGRRRRTAREKAGALVARDLMTAPAVTTHERASLAATARLMDHEAVKRLPVLDDLGR 129

Query: 326 AIGIVHFLDLLR 337
             GIV   DLLR
Sbjct: 130 LAGIVTRGDLLR 141



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 31/57 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + T  V DVM ++   + E+T     + +L +  IS + VVD  ++ +G++   DLL
Sbjct: 1   MRTWQVTDVMTRDVATVTEETPYREVVDVLVRQRISGVPVVDSFRRVLGVISEADLL 57


>gi|163789515|ref|ZP_02183954.1| hypothetical protein CAT7_02067 [Carnobacterium sp. AT7]
 gi|159875369|gb|EDP69434.1| hypothetical protein CAT7_02067 [Carnobacterium sp. AT7]
          Length = 268

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 65/168 (38%), Gaps = 6/168 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + + S    ++ +    F  A+        +++I G+G SG    +L   L   G    
Sbjct: 96  TQLIHSASQLIETKQINDFVEAIHL----SNKILICGVGNSGLSAMELKYRLVRMGLIVD 151

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V        D  ++ + DL+I +S  G +  +      A++    +  IT++N + +  
Sbjct: 152 VVTDPHMMLMDAVLLKKYDLMIAISNYGQTQAVIDACTIAKKEDATVFVITNQNHTPLTK 211

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            AD VL                 S +    I D L   LLE++++ EN
Sbjct: 212 IADQVLFASGRTSIPDE--QFINSQLPIHFILDVLCYVLLENKSYKEN 257


>gi|56421020|ref|YP_148338.1| hypothetical protein GK2485 [Geobacillus kaustophilus HTA426]
 gi|261418497|ref|YP_003252179.1| hypothetical protein GYMC61_1032 [Geobacillus sp. Y412MC61]
 gi|297529349|ref|YP_003670624.1| hypothetical protein GC56T3_1005 [Geobacillus sp. C56-T3]
 gi|319767542|ref|YP_004133043.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
 gi|56380862|dbj|BAD76770.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
 gi|261374954|gb|ACX77697.1| CBS domain containing protein [Geobacillus sp. Y412MC61]
 gi|297252601|gb|ADI26047.1| CBS domain containing protein [Geobacillus sp. C56-T3]
 gi|317112408|gb|ADU94900.1| CBS domain containing protein [Geobacillus sp. Y412MC52]
          Length = 197

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 57/142 (40%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        +V     + DAI  +  +  G + VVD+   L
Sbjct: 48  FYTGKTGKQLFADKMKKMKVEDYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVVDDESLL 107

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L  + V  +M + P   V  +D  L    + L +  I  + V
Sbjct: 108 AGVLSRKDLLRASLGKQELTAIPVNIIMTRMPNIAVCYKDDPLIDVAEQLIEKQIDAMPV 167

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V   +K    IG +   ++ + 
Sbjct: 168 VRKTEKGYEVIGRITKTNITKA 189


>gi|297798378|ref|XP_002867073.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297312909|gb|EFH43332.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 715

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 49/122 (40%), Gaps = 17/122 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKD 279
                  V +   L +A+T +  ++  C  +VD      GI+T  DI       +  +K 
Sbjct: 570 MRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPDNIFLGILTLSDIQEFSKARKEGNKR 629

Query: 280 LNTLSVEDVMIKN------PKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQ-KAIG 328
              + V D+  ++      P  +  D  L  A  ++ +H IS + VV    D  +   +G
Sbjct: 630 PKDIFVNDICSRSGGKCKVPWTVTPDMDLLAAQTIMNKHEISHVAVVSGSIDAHRIHPVG 689

Query: 329 IV 330
           ++
Sbjct: 690 VL 691



 Score = 39.5 bits (91), Expect = 0.71,   Method: Composition-based stats.
 Identities = 11/51 (21%), Positives = 21/51 (41%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V + M      ++  T L  A+  +     S  ++VD     +GI+   D+
Sbjct: 566 VSEAMRTRFATVMMSTSLEEALTRMLIEKQSCALIVDPDNIFLGILTLSDI 616


>gi|170019680|ref|YP_001724634.1| sugar isomerase (SIS) [Escherichia coli ATCC 8739]
 gi|169754608|gb|ACA77307.1| sugar isomerase (SIS) [Escherichia coli ATCC 8739]
          Length = 186

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 67/178 (37%), Gaps = 13/178 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LES+       Q    + +I+  +  + + G G+SG      A+ L   G     V 
Sbjct: 11  LHELESNALKIDDAQAAQFISQIRNAR-HIFLQGAGRSGIAIRAFANRLLHLGFSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A    + +  +T +  S +   A 
Sbjct: 70  EISSPHT-----QPGDLLIIGSGSGETTSLKSLAQKAVDSGVNVALVTMKADSTIGKLAQ 124

Query: 158 IVLTLPKEPESCPHGLA-----PTTSAIMQ--LAIGDALAIALLESRNFSENDFYVLH 208
            VL LP   +     +A     P  SA  Q      DA+ + L+     S    +  H
Sbjct: 125 SVLVLPGSVKDDNSRVAGAFAQPMGSAFEQLCFITYDAIVLELMSELGESSATMFTRH 182


>gi|302536790|ref|ZP_07289132.1| signal-transduction protein [Streptomyces sp. C]
 gi|302445685|gb|EFL17501.1| signal-transduction protein [Streptomyces sp. C]
          Length = 130

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 3/105 (2%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
               L  A  ++S +R G   V+D      GI+TE DI  +     D +  SV      N
Sbjct: 16  PAHSLRQAACLMSGRRVGAAVVLDPDHSGIGILTERDILNSIGAGHDPDRESVGAHTTNN 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +  +  A + +       L+V++D    +GIV   D++R
Sbjct: 76  VVFCTPEATVQEAAEAMVHGGFRHLIVLEDGG-PVGIVSVRDVIR 119


>gi|253997459|ref|YP_003049523.1| putative signal transduction protein [Methylotenera mobilis JLW8]
 gi|253984138|gb|ACT48996.1| putative signal transduction protein with CBS domains
           [Methylotenera mobilis JLW8]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 41/89 (46%), Gaps = 4/89 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +    P+ DA+ +L+E + G + V+ EGQ L GI +E D  R      +   T S+ +VM
Sbjct: 19  IAPHRPVFDALVVLAEYKIGALIVL-EGQSLVGIFSERDYAREVILKGRSSKTTSIHEVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       +  A+ L+ +H I  L 
Sbjct: 78  TSKVLTATPSDSVEYALSLMTEHRIRHLP 106


>gi|187922843|ref|YP_001894485.1| hypothetical protein Bphyt_0839 [Burkholderia phytofirmans PsJN]
 gi|187714037|gb|ACD15261.1| CBS domain containing membrane protein [Burkholderia phytofirmans
           PsJN]
          Length = 388

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 9/89 (10%)

Query: 256 VVDEGQKLKGIITEGDI--------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
           V++   +L  I T+ D+         + + +  N L+  D+M ++   +   T  + A  
Sbjct: 206 VLNRRGELLDIDTD-DLESLLRDVQLQAYARTFNELTCADIMSRSLVAVSATTRASAAWS 264

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           LL+Q +I  L V D+ Q  IGIV   DL+
Sbjct: 265 LLKQRHIKALPVTDEKQHVIGIVTRADLV 293



 Score = 51.1 bits (121), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 18/125 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNTLS------ 284
           V        A ++L ++    + V DE Q + GI+T  D+   R F K     S      
Sbjct: 253 VSATTRASAAWSLLKQRHIKALPVTDEKQHVIGIVTRADLVDKRAFGKAPGQTSPMKRWF 312

Query: 285 ---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                    V  +M  + + +   T +   + +   +    + V+D  Q+  G++   DL
Sbjct: 313 RRSVTPAPLVGALMNVDVQTVEGTTPIVELVPVFANYGHHHIPVLDSQQRLAGMITQADL 372

Query: 336 LRFGI 340
           +  G+
Sbjct: 373 I-AGL 376


>gi|73539725|ref|YP_294245.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Ralstonia eutropha JMP134]
 gi|72117138|gb|AAZ59401.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Ralstonia eutropha JMP134]
          Length = 835

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 1/109 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               ++     L DA+  +       + V+       GI+TE DI R    +    +V  
Sbjct: 144 PQPVMIAPTTRLFDAMQTMRAGSLSAI-VIRYVGDEYGILTERDIVRLAAANALGDTVAS 202

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  + +     L  A Q+L ++ I  + V+DD  + +G++   D+L
Sbjct: 203 HATRPLRSLTRSQSLYAARQVLVENRIRHVGVLDDGGELVGLLSLADIL 251



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 2/105 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMIK 291
                P+ + +  ++E+R   + V+D   +  GI TE D +      D  T  +  +M  
Sbjct: 21  CAPLTPVGEVVARMAERRCSSIVVMD-QGRAVGIWTERDALALGEASDALTRPISALMSH 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               +   T L  A+   +   I   +VVDD ++ +G++   DL+
Sbjct: 80  PVLSLPGSTRLGDAVVHFKNQGIRHCLVVDDAERPLGMLTQTDLV 124



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 7/109 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIK 291
                L DA+     +      VVD+ ++  G++T+ D+  +   +  L T +++ V + 
Sbjct: 85  PGSTRLGDAVVHFKNQGIRHCLVVDDAERPLGMLTQTDLVMSHGAEFFLRTKAIDSVKLP 144

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIVHFLDLLRF 338
            P +I   T L  AMQ +R  ++S +++  V D     GI+   D++R 
Sbjct: 145 QPVMIAPTTRLFDAMQTMRAGSLSAIVIRYVGDEY---GILTERDIVRL 190


>gi|282162968|ref|YP_003355353.1| hypothetical protein MCP_0298 [Methanocella paludicola SANAE]
 gi|282155282|dbj|BAI60370.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 261

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/136 (17%), Positives = 46/136 (33%), Gaps = 9/136 (6%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G             +    + + +    L      +         VV +  ++ G++T  
Sbjct: 117 GLPELELEDRPVSEYMTRKVVVCQPEDSLSRVWLNMIHYGLTGFPVVGDRMEVIGMVTRE 176

Query: 271 DIF--------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           DI         R      N  +V+ +M      + E+  +  A ++  + NI  + VV  
Sbjct: 177 DITKRGYARIERESEGKKNPTTVQKIMSTPAITVEENDSIRKAAKIFMERNIGRVPVV-M 235

Query: 323 CQKAIGIVHFLDLLRF 338
             K  GIV   D++R 
Sbjct: 236 NGKLTGIVDRYDVIRA 251



 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 1/126 (0%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +     +   +    +P +     L  A  I+     G V VVD   +L G+++  DIF+
Sbjct: 57  STRSDVTVSGYVRADVPRLTPDTGLPRAAFIVIRTDEGRVPVVDPDSRLVGLLSVKDIFK 116

Query: 275 NFHK-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              + +L    V + M +   V   +  L+     +  + ++   VV D  + IG+V   
Sbjct: 117 GLPELELEDRPVSEYMTRKVVVCQPEDSLSRVWLNMIHYGLTGFPVVGDRMEVIGMVTRE 176

Query: 334 DLLRFG 339
           D+ + G
Sbjct: 177 DITKRG 182



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 31/54 (57%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D+M  NP+ +     +T A +++R++N   L VVD+  +  G++   D++
Sbjct: 1   MRVSDIMATNPQSVAPGEFVTHAREIMREYNYDSLPVVDN-GRVAGMITLQDII 53



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 4/120 (3%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  SD+M +      V  G  +  A  I+ E  +  + VVD   ++ G+IT  DI  N  
Sbjct: 1   MRVSDIMATNPQS--VAPGEFVTHAREIMREYNYDSLPVVD-NGRVAGMITLQDII-NVT 56

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + ++V   +  +   +  DT L  A  ++ + +   + VVD   + +G++   D+ +
Sbjct: 57  STRSDVTVSGYVRADVPRLTPDTGLPRAAFIVIRTDEGRVPVVDPDSRLVGLLSVKDIFK 116


>gi|270159831|ref|ZP_06188487.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|289165411|ref|YP_003455549.1| hypothetical protein LLO_2078 [Legionella longbeachae NSW150]
 gi|269988170|gb|EEZ94425.1| CBS domain-containing protein [Legionella longbeachae D-4968]
 gi|288858584|emb|CBJ12465.1| putative conserved hypothetical protein [Legionella longbeachae
           NSW150]
          Length = 146

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK--DLNT 282
               I  +     +I  I ++SE   G + VVD   +L GI++E DI R+  HK  +L T
Sbjct: 12  PRRKIIYIHPEDSVIKCINLMSEMDIGALVVVDNDNQLIGIVSERDIVRSCLHKCVNLET 71

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV+ K   ++  +  +  AMQ++       +++ D+  + I I+   DLL
Sbjct: 72  AKVSDVVYKEVMILSPNDHIEKAMQVITATKRRHVLIRDENNEFIAILSIGDLL 125



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I  +  +   + L+ + +I  L+VVD+  + IGIV   D++R
Sbjct: 17  IYIHPEDSVIKCINLMSEMDIGALVVVDNDNQLIGIVSERDIVR 60


>gi|260902158|ref|ZP_05910553.1| CBS domain protein [Vibrio parahaemolyticus AQ4037]
 gi|308108294|gb|EFO45834.1| CBS domain protein [Vibrio parahaemolyticus AQ4037]
          Length = 139

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 20  DMSLTAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLLDKLVKASYHCQDTHTVQECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++   +  +  +     +++     +  VVDD  K +GI+   D+LR 
Sbjct: 79  EDVLSVSPEMSVIELADMMKVGKPKMYPVVDDRGKLVGIITRRDVLRA 126



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD+  KL GIIT  D+ R  
Sbjct: 70  THTVQECMHEDVLS--VSPEMSVIELADMMKVGKPKMYPVVDDRGKLVGIITRRDVLRAI 127

Query: 277 HKDLNT 282
              LN 
Sbjct: 128 GMTLNE 133



 Score = 43.3 bits (101), Expect = 0.048,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M         D  LT A+ ++++   +    V+D+ +K +G +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTRDMSLTAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLL 57


>gi|225849322|ref|YP_002729486.1| magnesium transporter [Sulfurihydrogenibium azorense Az-Fu1]
 gi|225643176|gb|ACN98226.1| magnesium transporter [Sulfurihydrogenibium azorense Az-Fu1]
          Length = 456

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/181 (18%), Positives = 71/181 (39%), Gaps = 15/181 (8%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           L +    +       P  ++I++    D     +   +   + +         L      
Sbjct: 82  LHIKDSVDFILKLPTPEIASIIENIPEDVKKAVIENLKGEEKEELKH-----LLSEGEDK 136

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC----VAVVDEGQKLKGIITEGDIFRN 275
            + ++        V     + DAI  + E         + VVDE  KL G+I+  D+   
Sbjct: 137 VASIISDSYLA--VLDTSTVEDAIQKVKEYNQDIELVYIYVVDEKNKLVGVISLKDLL-- 192

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                + L ++D+M ++   +  +     A++  R++++ VL VVDD    +G+V+  D+
Sbjct: 193 --TYPSNLMIKDIMKRDLITLNIEDTKEEAIENFRRYDLYVLPVVDDEGTLLGVVYIEDI 250

Query: 336 L 336
           L
Sbjct: 251 L 251


>gi|298486036|ref|ZP_07004110.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298159513|gb|EFI00560.1| Inosine-5'-monophosphate dehydrogenase [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 489

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDAHFALKGMMTVKDIEKAK 204


>gi|77460809|ref|YP_350316.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           Pf0-1]
 gi|77384812|gb|ABA76325.1| inosine-5'-monophosphate dehydrogenase [Pseudomonas fluorescens
           Pf0-1]
          Length = 489

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 57/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+   F   L   +V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHDGDLVGIVTSRDVR--FETRL-DATVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VDD     G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDDKFALKGMMTVKDIEKAK 204


>gi|33592225|ref|NP_879869.1| hypothetical protein BP1087 [Bordetella pertussis Tohama I]
 gi|33601087|ref|NP_888647.1| hypothetical protein BB2104 [Bordetella bronchiseptica RB50]
 gi|33571870|emb|CAE41385.1| conserved hypothetical protein [Bordetella pertussis Tohama I]
 gi|33575522|emb|CAE32600.1| conserved hypothetical protein [Bordetella bronchiseptica RB50]
 gi|332381642|gb|AEE66489.1| hypothetical protein BPTD_1079 [Bordetella pertussis CS]
          Length = 152

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
                +  A+  +SE+  G + V+ E   L G++T  +I R+  +   ++   ++  +M 
Sbjct: 19  SPDTHVSVAVQTMSEQDIGSL-VIMESGMLAGMLTFREIIRHIDQHGGNVGDTTIRAIMD 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  DAPVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLLGVISFYDMAQA 124


>gi|307595931|ref|YP_003902248.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Vulcanisaeta distributa DSM 14429]
 gi|307551132|gb|ADN51197.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Vulcanisaeta distributa DSM 14429]
          Length = 611

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/167 (20%), Positives = 71/167 (42%), Gaps = 10/167 (5%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFV 96
           ++ S+L G    +F   V  +   + +++I G G S   G +G  L +T+   G  +  +
Sbjct: 270 AINSTLAGINEKEFDNVVNLLLNSR-KILIIGAGTSYHAGLVGDYLFTTM--LGLDTHAL 326

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
            ++E     +  +   D +I +S SG + +    +   +     ++AI++   S +   +
Sbjct: 327 ISSEYKKY-VNAVNEGDTVIAISQSGETIDTLVAVRAFKERGAKVVAISNVIDSAIPRES 385

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           + VL     PE    G+A T +   QL +   LA+    +      D
Sbjct: 386 NYVLYTRAGPE---IGVAATKTFTTQLVVLTVLALRAGIAMGRLSQD 429


>gi|239908969|ref|YP_002955711.1| glucosamine--fructose-6-phosphate aminotransferase [Desulfovibrio
           magneticus RS-1]
 gi|239798836|dbj|BAH77825.1| glucosamine--fructose-6-phosphate aminotransferase [Desulfovibrio
           magneticus RS-1]
          Length = 607

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 28  LRSIIAEKRGLSS-LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           L+ I  + R ++  L   +  E    +   +E + A + R+ I   G S H G      +
Sbjct: 257 LKEIFEQPRVVADCLTGRIDRETGSAWLPELEPLPAPE-RLFIVACGTSYHAGLWGMYLM 315

Query: 87  AS-TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
               G P+    A+E  + D  ++   D ++ +S SG + +  A +  A+     +I + 
Sbjct: 316 EQWAGIPTRVEIASELRYRD-PILGPGDTVVAISQSGETADTLAGIQLAKARGAKVIGLC 374

Query: 146 SENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFY 205
           +   S VA  AD+VL     PE     +A T +   QL +   +A+     R     +  
Sbjct: 375 NVVGSSVAREADVVLYTQAGPE---ISVASTKAMCSQLTLLTLMALVWGRKRGVLPAEVA 431


>gi|229816285|ref|ZP_04446594.1| hypothetical protein COLINT_03337 [Collinsella intestinalis DSM
           13280]
 gi|229808136|gb|EEP43929.1| hypothetical protein COLINT_03337 [Collinsella intestinalis DSM
           13280]
          Length = 268

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 58/169 (34%), Gaps = 6/169 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + + +  R + +    +           V+ I   +  V + G+G S  +   L   L 
Sbjct: 82  RKVMQSSIRSMEATSRLIDP---VALERCVQAIMRCR-VVNLYGVGASLLVARDLEQKLT 137

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
                             +  I  DDL IV S+SG + E+  +   AR     ++A+T  
Sbjct: 138 RVDKECHMREDWHGQLLSVRNIHPDDLAIVFSYSGLTHEMVTLARKARERGAKVVAVTRA 197

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
               +A  AD+VL                 S + QL + DAL    +  
Sbjct: 198 MGGQLADEADLVL--GVASSEPLVRSGAMGSRLSQLLVVDALFALYVTR 244


>gi|199599004|ref|ZP_03212412.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
 gi|199590112|gb|EDY98210.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 64/182 (35%), Gaps = 5/182 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             + KN ++      +        SL  ++           ++ I   + ++++ G+G S
Sbjct: 84  QEIQKNESLTTIKAKLKT--NASRSLAETVDQINENTVQTIIDLIHRSR-QILLFGVGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR-DDLIIVLSWSGSSDELKAILYYA 134
                 +A   +  G    F                   L   +S SG S E       A
Sbjct: 141 YLSVQNIAQKWSRLGYACHFSDDLNLFLPVAATADPKHTLTWFISNSGESPEAVLGAKLA 200

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           ++  +P+IA T    + +  +ADIV+    +P   P+  A T S   Q  + D L  A +
Sbjct: 201 KKAGLPVIATTKLGGNALTHYADIVIQTS-QPMEAPNRFAATQSLHAQFMLIDILYYAYV 259

Query: 195 ES 196
             
Sbjct: 260 SR 261


>gi|254166705|ref|ZP_04873559.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197624315|gb|EDY36876.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 278

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            S + I +   G    D +  L +     V V++E  K  GI++     R+  ++     
Sbjct: 1   MSRNPICVKAPGTK-KDVLKTLVKYNITGVPVINEEGKFLGIVS----RRDIFENPGEEQ 55

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +M ++   + ED  +  A  ++ ++    ++VVDD +  IG++   D L
Sbjct: 56  IAILMRRDVPTVKEDDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFL 107



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 41/174 (23%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  DF  +     +    +      +       + +  PL      +S        VVD
Sbjct: 101 ITPQDFLEV-----IEERKISEPVEKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVD 155

Query: 259 EGQKLKGIITEGDIFRNFHKD------------------------------------LNT 282
           +  KLKGI+T+ D+F     D                                    L  
Sbjct: 156 DDGKLKGIVTDRDLFEKAEVDKSVAISELGLGDDEDSWTWEGLRNVIKLFYMEEKVTLPK 215

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + VE  MIK+P  I   + +  A +++R++N S L V +     I +++  DL+
Sbjct: 216 IPVEKAMIKDPVTIFSKSPIWEAAKIMRKNNFSQLPVRNTHDDLIAMIYDSDLV 269



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +P VK    +  A +++       + VVD+ + + G+IT  D      +   +  V
Sbjct: 60  MRRDVPTVKEDDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFLEVIEERKISEPV 119

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E  + K    +   T L V    +   ++    VVDD  K  GIV   DL
Sbjct: 120 EKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVDDDGKLKGIVTDRDL 169


>gi|197121843|ref|YP_002133794.1| hypothetical protein AnaeK_1434 [Anaeromyxobacter sp. K]
 gi|196171692|gb|ACG72665.1| CBS domain containing protein [Anaeromyxobacter sp. K]
          Length = 147

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 50/125 (40%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              +   ++    +I+AI +L EK    + V+    +L G++TE  +F            
Sbjct: 12  MTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVTEKMLFGYMPAKATTLDQ 70

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+   V   M   P  +  DT L  A +LL    ++ ++VV+      G++   
Sbjct: 71  WELHYLLSKTPVRAAMNPAPHTVHPDTPLAEAARLLHDRKLNGVLVVNAQGDLQGLLTTT 130

Query: 334 DLLRF 338
           + L  
Sbjct: 131 NALEA 135



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            L+V D M KNP  I +++ +  A+ LL++ NI  L V+    + +G+V 
Sbjct: 5   KLTVGDWMTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVT 53


>gi|167570208|ref|ZP_02363082.1| SIS domain protein [Burkholderia oklahomensis C6786]
          Length = 293

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + + A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 117 ARQFVDASRAGLDELAAGLD---DDQFDAAVTMLEKAEN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 173 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 227 QTLVITDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|28897732|ref|NP_797337.1| inosine monophosphate dehydrogenase-like protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|153838654|ref|ZP_01991321.1| CBS domain containing protein [Vibrio parahaemolyticus AQ3810]
 gi|260363838|ref|ZP_05776593.1| CBS domain protein [Vibrio parahaemolyticus K5030]
 gi|260876902|ref|ZP_05889257.1| CBS domain protein [Vibrio parahaemolyticus AN-5034]
 gi|260897956|ref|ZP_05906452.1| CBS domain protein [Vibrio parahaemolyticus Peru-466]
 gi|28805945|dbj|BAC59221.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           parahaemolyticus RIMD 2210633]
 gi|149747932|gb|EDM58798.1| CBS domain containing protein [Vibrio parahaemolyticus AQ3810]
 gi|308085511|gb|EFO35206.1| CBS domain protein [Vibrio parahaemolyticus Peru-466]
 gi|308093660|gb|EFO43355.1| CBS domain protein [Vibrio parahaemolyticus AN-5034]
 gi|308113890|gb|EFO51430.1| CBS domain protein [Vibrio parahaemolyticus K5030]
 gi|328473287|gb|EGF44135.1| inosine monophosphate dehydrogenase-like protein [Vibrio
           parahaemolyticus 10329]
          Length = 139

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 20  DMSLTAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLLDKLVKASYHCQDTHTVQECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++   +  +  +     +++     +  VVDD  K +GI+   D+LR 
Sbjct: 79  EDVLSVSPEMSVIELADMMKVGKPKMYPVVDDRGKLVGIITRRDVLRA 126



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD+  KL GIIT  D+ R  
Sbjct: 70  THTVQECMHEDVLS--VSPEMSVIELADMMKVGKPKMYPVVDDRGKLVGIITRRDVLRAI 127

Query: 277 HKDLNT 282
              LN 
Sbjct: 128 GMTLNE 133



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M        +D  LT A+ ++++   +    V+D+ +K +G +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTKDMSLTAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLL 57


>gi|255279680|ref|ZP_05344235.1| putative phosphosugar-binding transcriptional regulator [Bryantella
           formatexigens DSM 14469]
 gi|255269453|gb|EET62658.1| putative phosphosugar-binding transcriptional regulator [Bryantella
           formatexigens DSM 14469]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/160 (18%), Positives = 61/160 (38%), Gaps = 11/160 (6%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRG---LSSLESSLQGELSFQFHCAVE-------KIKAI 63
           +G+  M     +  LR +  +K     +  +    Q  L+  ++   E       +    
Sbjct: 70  RGYREMIYQYEKS-LRDVRRKKHADNNIQMVLDLYQEVLNKTYNLVDETQILHIVRCMNT 128

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
             RV + G+G SG    ++ S  A  G     +  A+        +    L+I LS SG 
Sbjct: 129 ANRVYVCGMGSSGQAACEMESRFARIGVDIDSIQDADRMRMQTVFMNPGKLVIGLSLSGE 188

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
           ++E+  +L  + +     +  T+  +  +  +   V+ LP
Sbjct: 189 TEEVLYLLRESGKRKAQTVLFTANEREQLRQYCTEVVRLP 228


>gi|14591680|ref|NP_143767.1| D-arabino 3-hexulose 6-phosphate formaldehyde lyase [Pyrococcus
           horikoshii OT3]
 gi|3258382|dbj|BAA31065.1| 406aa long hypothetical D-arabino 3-hexulose 6-phosphate
           formaldehyde lyase [Pyrococcus horikoshii OT3]
          Length = 406

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/213 (18%), Positives = 77/213 (36%), Gaps = 24/213 (11%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           VTRK   L  +  ++   +++      ++ +   L+     +    V+ +     ++ I 
Sbjct: 199 VTRKIIDLFWDEYMKTIRKAMKDITDHINEVADKLR---LDEVRGLVDAMIGA-NKIFIY 254

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G+SG +G   A  L       + V                DL+I +S SG +  +   
Sbjct: 255 GAGRSGLVGKAFAMRLMHLDFNVYVVGETITP-----AFEEGDLLIAISGSGETKTIVDA 309

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------------LAPTT 177
              A++    ++AITS   S +   AD+V+ +P   ++                  AP  
Sbjct: 310 AEIAKQQGGKVVAITSYKDSTLGRLADVVVEIPGRTKTDVPTDYIARQMLTKYKWTAPMG 369

Query: 178 SAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           +      +   D +   L+ +   +E D    H
Sbjct: 370 TLFEDSTMIFLDGIIALLMATFQKTEKDMRKKH 402


>gi|50303677|ref|XP_451781.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
 gi|49640913|emb|CAH02174.1| KLLA0B05511p [Kluyveromyces lactis]
          Length = 523

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            AP  S+ M       +AI  ALL       ++         +  +    +  ++     
Sbjct: 69  NAPFVSSPMDTVTEAEMAIHIALLGGIGIIHHNCSAEEQAEMVRKVKKYENGFINQ---P 125

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +A  +  +  F    V + G    KL GI+T  DI   F +D N+L V +
Sbjct: 126 IVISPETTVAEAKKMKQQFGFAGFPVTENGKMPGKLLGIVTSRDI--QFVED-NSLLVSE 182

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M K+     +   L  A  +L+      L +VD     + ++   DL++
Sbjct: 183 IMTKDVVTGKKGITLEEANDILKSTKKGKLPIVDANSTLVSMLSRTDLMK 232


>gi|15679236|ref|NP_276353.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622336|gb|AAB85714.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 272

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/135 (22%), Positives = 52/135 (38%), Gaps = 20/135 (14%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---- 278
           +          +   P+      + E  F  + V+ +  KL GIIT  D+ R  H     
Sbjct: 136 MEIMTPEPVTCQHSDPVSAVWDKMDESGFSGLPVM-KNGKLIGIITRKDLIRYGHARIHR 194

Query: 279 ---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD------------DC 323
              D+ +++VE +M   P  I  DT    A  L+ + +I  + VV+              
Sbjct: 195 ESGDVRSVAVEKIMKTPPIAITPDTPSEKAAFLMLERDIGRIPVVEKPVFIKSDPSMVKE 254

Query: 324 QKAIGIVHFLDLLRF 338
              +GIV   D+L+ 
Sbjct: 255 ADLLGIVSREDVLKA 269



 Score = 59.5 bits (143), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 4/84 (4%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           E  KL GI++  D    F +         V ++M   P        ++     + +   S
Sbjct: 106 ESMKLVGIVSTIDFISGFLEKGYEPVKSPVMEIMTPEPVTCQHSDPVSAVWDKMDESGFS 165

Query: 316 VLMVVDDCQKAIGIVHFLDLLRFG 339
            L V+    K IGI+   DL+R+G
Sbjct: 166 GLPVM-KNGKLIGIITRKDLIRYG 188



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +N L V DVM  NP  +  +T  T    +LR  +   + VV   +K  GI+   D+L
Sbjct: 1   MNDLFVRDVMTLNPVSVSLETAATRVRSILRDEDFRCVPVV-AGEKLRGIITRGDVL 56



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 34/108 (31%), Positives = 52/108 (48%), Gaps = 8/108 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V +        +IL ++ F CV VV  G+KL+GIIT GD+  N     + L    +M + 
Sbjct: 17  VSLETAATRVRSILRDEDFRCVPVV-AGEKLRGIITRGDVL-NITATKSNLEARGIM-ER 73

Query: 293 PKVI-LEDTLL-TVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
           PK+I   +      A  L+R   I    VV+  +  K +GIV  +D +
Sbjct: 74  PKLILTPEMEAMKAAADLVRAGEIQA-PVVESTESMKLVGIVSTIDFI 120


>gi|317126018|ref|YP_004100130.1| signal transduction protein with CBS domains [Intrasporangium
           calvum DSM 43043]
 gi|315590106|gb|ADU49403.1| putative signal transduction protein with CBS domains
           [Intrasporangium calvum DSM 43043]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 48/118 (40%), Gaps = 3/118 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           + H GD + ++     +   +  L+E   G   V  +G  + GI++E D+ R+ H     
Sbjct: 7   LRHKGDEVIVIAPDETVSTLLARLAEHGIGACVVSADGTHVDGIVSERDVVRHLHTSGPT 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   SV  +M  +         +      + +  +  + ++D   +   IV   D+++
Sbjct: 67  ILENSVSTIMTSDVTTGTAHDDVADLAATMTELRVRHVPILDADGRLSAIVSIGDIVK 124


>gi|238751185|ref|ZP_04612680.1| Transcriptional regulator, RpiR family [Yersinia rohdei ATCC 43380]
 gi|238710663|gb|EEQ02886.1| Transcriptional regulator, RpiR family [Yersinia rohdei ATCC 43380]
          Length = 277

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAVQTSAE---QLDKAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|228475183|ref|ZP_04059909.1| CBS domain protein [Staphylococcus hominis SK119]
 gi|228270794|gb|EEK12196.1| CBS domain protein [Staphylococcus hominis SK119]
          Length = 432

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++   + + +V     L D I+           VV++  KL GI+T 
Sbjct: 180 NQMIRKEILIVEDIVKPINDMTVVFDEMGLDDYISRAKVTGHSRFPVVNKDWKLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            ++      D        VM + P  +   T +     ++    I +L V    +KAIG+
Sbjct: 240 KEVIHMNEDDRMNK----VMTRRPINVELTTTVASCAHIMIWEGIEILPVTTRNKKAIGV 295

Query: 330 VHFLDLLRF 338
           +   D+L+ 
Sbjct: 296 ITRNDVLKA 304


>gi|227534588|ref|ZP_03964637.1| RpiR family transcriptional regulator [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
 gi|227187837|gb|EEI67904.1| RpiR family transcriptional regulator [Lactobacillus paracasei
           subsp. paracasei ATCC 25302]
          Length = 280

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 3/154 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAS 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 163 DYHMQLMAATHLGPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
                  E            + I +++I D L +
Sbjct: 223 AAFVAVAEESRYRTEAL--HALIAEISIMDTLFM 254


>gi|58377269|ref|XP_309514.2| AGAP011133-PA [Anopheles gambiae str. PEST]
 gi|55244858|gb|EAA05291.2| AGAP011133-PA [Anopheles gambiae str. PEST]
          Length = 538

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/184 (16%), Positives = 61/184 (33%), Gaps = 10/184 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L           AP  S+ M       +AI++           +              
Sbjct: 70  VDLSSPLTKKIMLKAPLVSSPMDTVTEAEMAISMALCGGIGI--IHHNCTPEYQANEVHK 127

Query: 220 ASDVMHSGDSIPLVK-IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRN 275
                H     PLV      + D +    +  F    + + G+   +L GI+T  DI  +
Sbjct: 128 VKKYKHGFIRDPLVMGPENTVADVLEAKRKNGFTGYPITENGKIGTRLVGIVTSRDI--D 185

Query: 276 FHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           F +    + ++D+M K  +         L  A  ++ +     L +V+   + + ++   
Sbjct: 186 FREHDVDIKLKDIMTKLEDLITAPNGVTLQEANNIMEKSKKGKLPIVNKTGELVALIART 245

Query: 334 DLLR 337
           DL +
Sbjct: 246 DLKK 249


>gi|289677929|ref|ZP_06498819.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           syringae FF5]
          Length = 268

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|283835452|ref|ZP_06355193.1| transcriptional regulator [Citrobacter youngae ATCC 29220]
 gi|291068633|gb|EFE06742.1| transcriptional regulator [Citrobacter youngae ATCC 29220]
          Length = 274

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 4/143 (2%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +    + L      L   L      A+ + ++    V I G+  S  +G  L   L   
Sbjct: 94  VVSESVQALQDTAKLLDRTLLEAAALALHQAQS----VQIYGVAASAILGEYLHYKLLRL 149

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G P+        +  +   +++D L++ +S SGS+ +L  ++  AR+  + ++A+++  +
Sbjct: 150 GKPAQLFSDMHRAAMNATTLSKDTLVVAISSSGSTRDLLHVVKLARKQGVRVLALSNTPR 209

Query: 150 SVVACHADIVLTLPKEPESCPHG 172
           S +A  +DI L   K       G
Sbjct: 210 SPLASLSDIQLVAAKPEGPLSAG 232


>gi|15679872|ref|NP_276990.1| hypothetical protein MTH1884 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2623022|gb|AAB86350.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 122

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  V+    ++ A   L + R   + V+ E  KL GI+T  D+  N   D   L  
Sbjct: 1   MTRDVITVEPSEDVVFAFEKLMKHRISALPVL-EEGKLAGIVTASDLGHNLILDNYELGT 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V +VM+K+   +     L  A++ +  ++     I+ L+VVDD    +GI+   D++R 
Sbjct: 60  TVGEVMVKDVATVAPGETLADAIEKMNDYSSDEGIINQLVVVDDGDM-VGIIADGDIIRA 118



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKR--FGCVA--VVDEGQKLKGIITEGDIFRNF 276
               +  V  G  L DAI  +++     G +   VV +   + GII +GDI R  
Sbjct: 65  MVKDVATVAPGETLADAIEKMNDYSSDEGIINQLVVVDDGDMVGIIADGDIIRAL 119


>gi|238797032|ref|ZP_04640535.1| Transcriptional regulator, RpiR family [Yersinia mollaretii ATCC
           43969]
 gi|238719077|gb|EEQ10890.1| Transcriptional regulator, RpiR family [Yersinia mollaretii ATCC
           43969]
          Length = 278

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 122 AQALQQLAVQTSAE---QLDRAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 177

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 178 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 237

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 238 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 277


>gi|325960187|ref|YP_004291653.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
 gi|325331619|gb|ADZ10681.1| CBS domain containing membrane protein [Methanobacterium sp. AL-21]
          Length = 126

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 2/113 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + + +      L  A   +     G + VVDE  KL G+IT  DI     + L TL V
Sbjct: 11  MIEDVHVTSRTDVLAAAKLKMMRCNVGGLPVVDE-GKLVGMITHRDILLAGGEAL-TLKV 68

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M K+  V  + T +    +++       + V+DD    +G++    L+R 
Sbjct: 69  DDLMSKDLMVADKKTPIVEITKIMADKGYQRIPVIDDHGDLVGLITQSSLIRA 121



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           + L  E++MI++  V     +L  A   + + N+  L VVD+  K +G++   D+L  G
Sbjct: 3   DNLVAEEIMIEDVHVTSRTDVLAAAKLKMMRCNVGGLPVVDE-GKLVGMITHRDILLAG 60



 Score = 36.4 bits (83), Expect = 6.2,   Method: Composition-based stats.
 Identities = 10/41 (24%), Positives = 23/41 (56%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
            P+++   I+++K +  + V+D+   L G+IT+  + R   
Sbjct: 83  TPIVEITKIMADKGYQRIPVIDDHGDLVGLITQSSLIRALA 123


>gi|297209731|ref|ZP_06926127.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300910743|ref|ZP_07128193.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus TCH70]
 gi|296885404|gb|EFH24341.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus ATCC 51811]
 gi|300887723|gb|EFK82918.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Staphylococcus aureus subsp. aureus TCH70]
          Length = 423

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 260 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGI 319

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  ++ D+M ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++      
Sbjct: 320 RG---HKTLRDMMQQHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLIT----- 371

Query: 337 RFGII 341
           R  ++
Sbjct: 372 RANVV 376



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 255 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIE 313

Query: 334 DL 335
           D+
Sbjct: 314 DI 315


>gi|299823061|ref|ZP_07054947.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria grayi DSM 20601]
 gi|299816590|gb|EFI83828.1| RpiR family phosphosugar-binding transcriptional regulator
           [Listeria grayi DSM 20601]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/166 (16%), Positives = 58/166 (34%), Gaps = 5/166 (3%)

Query: 35  KRGLSSLESSLQ---GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           ++ L++   +L    G++S      V +       +   G+G S  +   +A      G 
Sbjct: 99  QKLLANYFQTLNDTAGQISEAKIRTVSEQLEKADTIYTYGVGASWLVAQDIAQKWLRAGK 158

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
                              +  +   +S SG +  +  +   A++ ++ +I +T    S 
Sbjct: 159 QVVISQDEHVLAMAFAA-RKSGVFFAVSNSGETTSVIELAEQAKQNNLTVIGLTRFGPSK 217

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +   AD +L   + PE+       T+S   Q  I D L    +   
Sbjct: 218 LKAKADFLLETSRAPEAK-FRSTATSSKQAQFFIIDVLYYHYVSRH 262


>gi|281492842|ref|YP_003354822.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           lactis KF147]
 gi|281376494|gb|ADA65980.1| Transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis KF147]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL S+L    + Q    +E +          G+G S  +                +  
Sbjct: 105 ISSLNSTLNLITNRQLDQTMEILLNAST-CGFFGLGGSNAVALIAFHKFLRMPLHCVYHQ 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T DD   V+S +G + +   ++   +   +P+IA+TS   S +A  AD
Sbjct: 164 DFHFQQMQAAKLTSDDCAFVISHTGKNRDTMHLVEILKSRGVPIIALTSFASSPLAKAAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L      E          S + Q+++ DAL +     
Sbjct: 224 VALI--SISEEISFRPEAVASTVSQISLLDALFMMYGMK 260


>gi|21284101|ref|NP_647189.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus MW2]
 gi|21205544|dbj|BAB96237.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus subsp. aureus MW2]
          Length = 410

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 247 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIEDINQGI 306

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  ++ D+M ++   +  D+ L  +++ + + NI  + VVDD Q+ +G++      
Sbjct: 307 RG---HKTLRDMMQQHIYTVQIDSKLQDSVRTILKRNIRNVPVVDDQQRLVGLIT----- 358

Query: 337 RFGII 341
           R  ++
Sbjct: 359 RANVV 363



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 242 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDTIFVVDSDNHLLGFLDIE 300

Query: 334 DL 335
           D+
Sbjct: 301 DI 302


>gi|159903780|ref|YP_001551124.1| nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9211]
 gi|159888956|gb|ABX09170.1| Nucleoside-diphosphate-sugar pyrophosphorylase [Prochlorococcus
           marinus str. MIT 9211]
          Length = 353

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 2/108 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFG-CVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
                   +      ++A+ +++         VVD+   L G IT+GDI R   K     
Sbjct: 1   MVDFKKACINYSSSALEALEVINSSNHAYIALVVDDSNLLIGTITDGDIRRGLLKGKTLE 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               D M +N   I +  +    +    ++ I+ L V+D+  K +G++
Sbjct: 61  AKATDFMNRNFDSIDQREVSKSLINQKFKNGINQLPVIDNEGKIVGLI 108


>gi|219667093|ref|YP_002457528.1| signal transduction protein with CBS domains [Desulfitobacterium
           hafniense DCB-2]
 gi|219537353|gb|ACL19092.1| putative signal transduction protein with CBS domains
           [Desulfitobacterium hafniense DCB-2]
          Length = 149

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 52/139 (37%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              ++  +     + +   +L +     V V+D    L GI++EGD+             
Sbjct: 7   MQTNVITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLLHKETHPRVPEAV 66

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + +  DL     L   ++M      + +D  +  A  L+  HN+  L 
Sbjct: 67  GFLGALIYYRGVKQYESDLKKLVALKASEIMTHEVITLEKDAAIEEAASLMINHNVKRLP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           ++ +  K +GI+   D+++
Sbjct: 127 IM-ENGKMVGIITRKDVIK 144



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M  N   I  +T +    +LL  H+IS + V+D     IGIV   DLL
Sbjct: 1   MKVQDIMQTNVITISPNTEIREIAKLLCDHHISGVPVIDLFGNLIGIVSEGDLL 54


>gi|182678555|ref|YP_001832701.1| signal-transduction protein [Beijerinckia indica subsp. indica ATCC
           9039]
 gi|182634438|gb|ACB95212.1| putative signal-transduction protein with CBS domains [Beijerinckia
           indica subsp. indica ATCC 9039]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 46/111 (41%), Gaps = 4/111 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    L++   IL + + G V V D    L GII+E DI     +        +V   M
Sbjct: 17  VQPHRTLLEVTEILMKNKIGAVVVTDAHGHLLGIISERDIVMALGQRGPIALEDAVSTHM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +   + ED  +   +  + +     L V+    +  G+V   D++++ +
Sbjct: 77  TSHVVTVSEDETVHETVSKMNRGRFRHLPVL-LNGRLCGLVSIGDVVKYRL 126


>gi|229550972|ref|ZP_04439697.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Lactobacillus rhamnosus LMS2-1]
 gi|258538316|ref|YP_003172815.1| transcriptional regulator RpiR family [Lactobacillus rhamnosus Lc
           705]
 gi|229315664|gb|EEN81637.1| bifunctional RpiR family transcriptional regulator/sugar isomerase
           [Lactobacillus rhamnosus LMS2-1]
 gi|257149992|emb|CAR88964.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus Lc
           705]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 64/182 (35%), Gaps = 5/182 (2%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             + KN ++      +        SL  ++           ++ I   + ++++ G+G S
Sbjct: 84  QEIQKNESLTTIKTKLKT--NATRSLAETVDQINENTVQTIIDLIHRSR-QILLFGVGAS 140

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR-DDLIIVLSWSGSSDELKAILYYA 134
                 +A   +  G    F                   L   +S SG S E       A
Sbjct: 141 YLSVQNIAQKWSRLGYACHFSDDLNLFLPVAATADPKHTLTWFISNSGESPEAVLGAKLA 200

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           ++  +P++A T    + +  +A+IV+    +P   P+  A T S   Q  + D L  A +
Sbjct: 201 KKAGLPVVATTKLGSNALTHYANIVIQTS-QPMEAPNRFAATQSLHAQFMLIDILYYAYV 259

Query: 195 ES 196
             
Sbjct: 260 SR 261


>gi|152998144|ref|YP_001342979.1| inosine-5'-monophosphate dehydrogenase [Marinomonas sp. MWYL1]
 gi|150839068|gb|ABR73044.1| inosine-5'-monophosphate dehydrogenase [Marinomonas sp. MWYL1]
          Length = 488

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/170 (19%), Positives = 66/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P TS+ M       +AIAL +         +  +     ++  +    S ++     +
Sbjct: 41  NIPLTSSAMDTVTEHRMAIALAQEGGIGIVHKNLTIEEQAREVRRVKKFESGIVR---DL 97

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + + + + +      V VV +G  L GI+T  D+   F KD +   V D+M 
Sbjct: 98  VTINPEASVQELMDLTAANSISSVPVV-QGTDLVGIVTSRDVR--FVKDYDK-KVSDIMT 153

Query: 291 K--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   LE        +LL ++ I  +++V++  +  G+V   D  + 
Sbjct: 154 PKDRLVTALEGASSGSIRKLLHENRIEKVLIVNEQFELRGMVTVTDFNKA 203


>gi|74311824|ref|YP_310243.1| DNA-binding transcriptional regulator HexR [Shigella sonnei Ss046]
 gi|73855301|gb|AAZ88008.1| conserved hypothetical protein [Shigella sonnei Ss046]
          Length = 289

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        +  V+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRTVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|15674168|ref|NP_268343.1| transcription regulator [Lactococcus lactis subsp. lactis Il1403]
 gi|12725250|gb|AAK06284.1|AE006448_2 transcription regulator [Lactococcus lactis subsp. lactis Il1403]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/159 (20%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL S+L    + Q    +E +          G+G S  +                +  
Sbjct: 105 ISSLNSTLNLITNRQLDQTMEILLNAST-CGFFGLGGSNAVALIAFHKFLRMPLHCVYHQ 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T DD   V+S +G + +   ++   +   +P+IA+TS   S +A  AD
Sbjct: 164 DFHFQQMQAAKLTSDDCAFVISHTGKNRDTMHLVEILKSRGVPIIALTSFASSPLAKSAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L      E          S + Q+++ DAL +     
Sbjct: 224 VALI--SISEEISFRPEAVASTVSQISLLDALFMMYGMK 260


>gi|256823577|ref|YP_003147540.1| putative signal transduction protein with CBS domains [Kangiella
           koreensis DSM 16069]
 gi|256797116|gb|ACV27772.1| putative signal transduction protein with CBS domains [Kangiella
           koreensis DSM 16069]
          Length = 134

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 53/128 (41%), Gaps = 7/128 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD---- 271
           +        +   ++  +K    +++A   + E R     V+D+  +L G I+E D    
Sbjct: 1   MIKSVHVRDYMTSAMITLKPQTDVVEAAQTMLEYRLTGAPVLDDHNRLVGFISEKDCLHT 60

Query: 272 -IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +   +H DL    V D+M K  K +  D  +    +   + N  +  V++  Q  +G++
Sbjct: 61  VLSAIYHGDLGH-RVMDLMTKEVKTVHPDDSIADVAERFLKDNCRMYPVMEKSQ-LVGMI 118

Query: 331 HFLDLLRF 338
               +L+ 
Sbjct: 119 SRQSILKA 126


>gi|270208642|ref|YP_003329413.1| hypothetical protein pSmeSM11ap115 [Sinorhizobium meliloti]
 gi|76880916|gb|ABA56086.1| conserved hypothetical protein [Sinorhizobium meliloti]
          Length = 224

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 20/125 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------KDL------ 280
           +     +  A   + E +   + V D+  +L GI++EGD+ R         +D+      
Sbjct: 14  ISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLRRAELGSVSWRDIAAVRTK 73

Query: 281 -------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                  ++  V D+M +    + E   +    +L+    I    V+   +  +GIV   
Sbjct: 74  PEAFIKGHSWRVGDLMTQPVVTVDEGMPVGRVAELMAAKGIKRTPVMRAEEM-VGIVSRS 132

Query: 334 DLLRF 338
           D+LR 
Sbjct: 133 DILRA 137



 Score = 57.6 bits (138), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/53 (33%), Positives = 27/53 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D+M K    I  D  +  A + + ++ IS L V DD  + +GI+   DLLR
Sbjct: 3   ARDIMKKKVLSISPDHGVRHAARTMLENQISGLPVCDDRGRLVGILSEGDLLR 55


>gi|296388332|ref|ZP_06877807.1| DNA-binding transcriptional regulator HexR [Pseudomonas aeruginosa
           PAb1]
          Length = 285

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ +         AV+ +   + ++   G+G S  +                   
Sbjct: 104 IASLDSAHKLLDPRVIDRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAQA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +V+S++G + EL  + + AR     ++ +T+   S +A  + 
Sbjct: 163 DVLMQRMIASVAHTGDLFVVISYTGRTRELVEVAHLARENGASVLGLTA-AGSPLARAST 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 LCLDIPLPEDTDIY--MPMTSRIVQLTVLDVLATGVTLRRG 260


>gi|261820826|ref|YP_003258932.1| RpiR family transcriptional regulator [Pectobacterium wasabiae
           WPP163]
 gi|261604839|gb|ACX87325.1| transcriptional regulator, RpiR family [Pectobacterium wasabiae
           WPP163]
          Length = 320

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/185 (17%), Positives = 62/185 (33%), Gaps = 4/185 (2%)

Query: 18  LMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH 77
           LM ++    A +  +   R +      +  +     +  V    + + RV+  G G SG 
Sbjct: 122 LMNDTRHDVAQKIALTVDRAVKETIDLIDMQ---TINQIVSLFISAR-RVMFIGFGASGL 177

Query: 78  IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRF 137
              +    +   G  S       +    L  +  DDL++  S SG + E+      A + 
Sbjct: 178 AALEARDKMNRIGIDSDAFTDRFSMTLKLANLKPDDLVVAFSHSGETPEVVNAFKLAEKA 237

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
               +AIT    S +    + VL    E E        T  + + +       +     +
Sbjct: 238 GATRLAITHSTHSPLTSLGNYVLLTCGESERYQGDSIGTRVSQLFMIEFLCTELTKQNFK 297

Query: 198 NFSEN 202
           +FS  
Sbjct: 298 DFSSQ 302


>gi|295680850|ref|YP_003609424.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
 gi|295440745|gb|ADG19913.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
          Length = 155

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 45/109 (41%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN---FHKDLNTLSVEDVM 289
           V     ++ A+ ++++K    V V+     L G++++ D  R      ++  +  V D+M
Sbjct: 22  VGPDDTVLSALQLMADKDVTTVLVLQSSN-LVGVLSQRDYARKVDVLGRNAASTRVGDIM 80

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  +      +  +    I  L V+ +  + IG++   D+L  
Sbjct: 81  TTQVFYVTPEHTCDQCLASMHTKRIRHLPVI-ESGRVIGVLSNSDVLEE 128


>gi|167566976|ref|ZP_02359892.1| CBS domain protein [Burkholderia oklahomensis EO147]
 gi|167574047|ref|ZP_02366921.1| CBS domain protein [Burkholderia oklahomensis C6786]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 19/112 (16%), Positives = 43/112 (38%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  +++    G + V  E  +L G++T+ D+  R          
Sbjct: 8   MSLDVVHVAPSDSIRHAAELMARFDIGALPVC-EDNRLIGMVTDRDLVVRAVSAGKTPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +V     +   +D  +    + +    +  + VVD  ++ +G++   DL
Sbjct: 67  KVREVASGTIEWCFDDDQIDDVQKFMADAQLRRMPVVDHDKRLVGMLSIGDL 118



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++M  +   +     +  A +L+ + +I  L V  +  + IG+V   DL+
Sbjct: 4   INEIMSLDVVHVAPSDSIRHAAELMARFDIGALPVC-EDNRLIGMVTDRDLV 54


>gi|83643124|ref|YP_431559.1| CBS domain-containing protein [Hahella chejuensis KCTC 2396]
 gi|83631167|gb|ABC27134.1| CBS-domain-containing membrane protein [Hahella chejuensis KCTC
           2396]
          Length = 148

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 48/127 (37%), Gaps = 13/127 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  +     L DA  ++ E+    + VV+   KL+G++T+ D+F      +  +  
Sbjct: 8   MSHPVHTLSTENSLADARKMMQEQGIRHIPVVNAKNKLEGLVTQRDVFAAMDSSVYDMPP 67

Query: 284 ----------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                      V  VM         DT +  A + L+      L VV +    +GI+   
Sbjct: 68  ELMEAHESEIPVTQVMRTKVATASLDTPIRKAAEFLQTKKYGCLPVV-ENGHVVGILTGG 126

Query: 334 DLLRFGI 340
           D ++  I
Sbjct: 127 DFIKIAI 133



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 25/54 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++DVM      +  +  L  A +++++  I  + VV+   K  G+V   D+   
Sbjct: 4   MKDVMSHPVHTLSTENSLADARKMMQEQGIRHIPVVNAKNKLEGLVTQRDVFAA 57



 Score = 36.0 bits (82), Expect = 7.4,   Method: Composition-based stats.
 Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 1/66 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   +                +    +  P+  A   L  K++GC+ VV E   + GI+T
Sbjct: 66  PPELMEAHESEIPVTQVMRTKVATASLDTPIRKAAEFLQTKKYGCLPVV-ENGHVVGILT 124

Query: 269 EGDIFR 274
            GD  +
Sbjct: 125 GGDFIK 130


>gi|15598380|ref|NP_251874.1| DNA-binding transcriptional regulator HexR [Pseudomonas aeruginosa
           PAO1]
 gi|107102714|ref|ZP_01366632.1| hypothetical protein PaerPA_01003780 [Pseudomonas aeruginosa PACS2]
 gi|116051173|ref|YP_789996.1| DNA-binding transcriptional regulator HexR [Pseudomonas aeruginosa
           UCBPP-PA14]
 gi|254236145|ref|ZP_04929468.1| hypothetical protein PACG_02110 [Pseudomonas aeruginosa C3719]
 gi|254241871|ref|ZP_04935193.1| hypothetical protein PA2G_02592 [Pseudomonas aeruginosa 2192]
 gi|313108497|ref|ZP_07794499.1| putative transcriptional regulator, RpiR family [Pseudomonas
           aeruginosa 39016]
 gi|12231002|sp|O68281|HEXR_PSEAE RecName: Full=HTH-type transcriptional regulator hexR; AltName:
           Full=Hex regulon repressor
 gi|9949302|gb|AAG06572.1|AE004742_8 probable transcriptional regulator [Pseudomonas aeruginosa PAO1]
 gi|115586394|gb|ABJ12409.1| putative transcriptional regulator, RpiR family [Pseudomonas
           aeruginosa UCBPP-PA14]
 gi|126168076|gb|EAZ53587.1| hypothetical protein PACG_02110 [Pseudomonas aeruginosa C3719]
 gi|126195249|gb|EAZ59312.1| hypothetical protein PA2G_02592 [Pseudomonas aeruginosa 2192]
 gi|310881001|gb|EFQ39595.1| putative transcriptional regulator, RpiR family [Pseudomonas
           aeruginosa 39016]
          Length = 285

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 66/161 (40%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SL+S+ +         AV+ +   + ++   G+G S  +                   
Sbjct: 104 IASLDSAHKLLDPRVIDRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAQA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     +    DL +V+S++G + EL  + + AR     ++ +T+   S +A  + 
Sbjct: 163 DVLMQRMIASVAHTGDLFVVISYTGRTRELVEVAHLARENGASVLGLTA-AGSPLARAST 221

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 222 LCLDIPLPEDTDIY--MPMTSRIVQLTVLDVLATGVTLRRG 260


>gi|314936195|ref|ZP_07843542.1| CBS domain protein [Staphylococcus hominis subsp. hominis C80]
 gi|313654814|gb|EFS18559.1| CBS domain protein [Staphylococcus hominis subsp. hominis C80]
          Length = 434

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++   + + +V     L D I+           VV++  KL GI+T 
Sbjct: 182 NQMIRKEILIVEDIVKPINDMTVVFDEMGLDDYISRAKVTGHSRFPVVNKDWKLVGIVTS 241

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            ++      D        VM + P  +   T +     ++    I +L V    +KAIG+
Sbjct: 242 KEVIHMNEDDRMNK----VMTRRPINVELTTTVASCAHIMIWEGIEILPVTTRNKKAIGV 297

Query: 330 VHFLDLLRF 338
           +   D+L+ 
Sbjct: 298 ITRNDVLKA 306


>gi|295703828|ref|YP_003596903.1| CBS domain pair family protein [Bacillus megaterium DSM 319]
 gi|294801487|gb|ADF38553.1| CBS domain pair family protein [Bacillus megaterium DSM 319]
          Length = 141

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 4/104 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNT-LSVEDVMIK 291
            +     +   ++     G + +  E  KL G+IT+ D+  +    + NT   + +++  
Sbjct: 15  NLKSSCGEVANMMKNVDVGVIPIC-ENDKLIGLITDRDLVVKGLANNFNTNTQISEMITT 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +     +   +  A  L+ QH I  L +V +  K IG+V   DL
Sbjct: 74  DVITGTKYMSVEQASDLMSQHQIRRLPIV-ENGKLIGMVSLGDL 116


>gi|148244576|ref|YP_001219270.1| IMP dehydrogenase [Candidatus Vesicomyosocius okutanii HA]
 gi|146326403|dbj|BAF61546.1| IMP dehydrogenase [Candidatus Vesicomyosocius okutanii HA]
          Length = 486

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/171 (21%), Positives = 67/171 (39%), Gaps = 15/171 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 40  NIPILSAAMDTVTESKLAIAIAQEGGIG-----IIHKNISVEEQANEVHRVKRFESGIIK 94

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               + +   + D + +  +     + VV EG  +KG++T  D+   F   LN L V++V
Sbjct: 95  EPITISLKATIADVLKMQQQYNISALPVV-EGNTIKGLVTGRDVR--FKTRLNEL-VKNV 150

Query: 289 MIKNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M    K   + E T +     LL++H I  +++ DD     G+++  D+ +
Sbjct: 151 MTPQNKLITVKEGTNINKVRSLLQKHRIERIIITDDTFNLKGMINVSDIQK 201


>gi|75675224|ref|YP_317645.1| hypothetical protein Nwi_1031 [Nitrobacter winogradskyi Nb-255]
 gi|74420094|gb|ABA04293.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 10/126 (7%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----- 277
             +    +  V     +     + +   F    VVD+ ++  G++T+ D  + F      
Sbjct: 10  DRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLKCFAITLSS 69

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +L   +V DVMI     +   T L   +QL+ +H +  + V+   +  +GI+  
Sbjct: 70  VVPHYDELMRRAVSDVMIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGGRNLVGIISR 129

Query: 333 LDLLRF 338
            D++R 
Sbjct: 130 EDVMRA 135



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 20/51 (39%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V     L   + ++ E R   + V+  G+ L GII+  D+ R  
Sbjct: 86  MIHEFIYVGPTTKLARVLQLMVEHRLRSIPVMGGGRNLVGIISREDVMRAL 136



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 27/58 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               +V+  M ++ + +  D  +     L    + +   VVDD ++AIG+V   D L+
Sbjct: 4   FLEQTVDRYMTRDVRTVSCDLTMDKLNDLFASDDFNAYPVVDDQREAIGLVTKFDFLK 61


>gi|289623917|ref|ZP_06456871.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289648187|ref|ZP_06479530.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|330865731|gb|EGH00440.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. 0893_23]
          Length = 286

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    +F  AV  +   +  +   G+G  S     +L + L   G P     
Sbjct: 102 ATLHQHLAGFDESRFAAAVACLSDAR-MIHAFGMGGCSSLCSEELQTRLVRLGYPVAACR 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +I  S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 161 DPVMMRMIAATLGPQHSLIACSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 260


>gi|160939674|ref|ZP_02087022.1| hypothetical protein CLOBOL_04566 [Clostridium bolteae ATCC
           BAA-613]
 gi|158437465|gb|EDP15229.1| hypothetical protein CLOBOL_04566 [Clostridium bolteae ATCC
           BAA-613]
          Length = 301

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/199 (16%), Positives = 72/199 (36%), Gaps = 5/199 (2%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSLQGELSFQFHCAVEK 59
                  + +T     + +N         II +     + +L  + +         +++ 
Sbjct: 87  ALKVGVARELTTPQEKIHENLEADSPAEVIIEKIFSSAIETLSMTQKSINVKAVAASIDA 146

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   + R++I G G S  I +            +            +  +T  D+++ +S
Sbjct: 147 LCRAR-RIIIIGNGNSASIAADAQHKFLRLDLNAHAYTDDHMQMIAVSSMTDQDVLLAIS 205

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SGSS  +    + A+     +I++T+E  S V+  ADI L      +   +     +S 
Sbjct: 206 YSGSSRNVVEAAHQAKEQGATVISLTNEGSSPVSKLADICLNTY--SQETRYRTYAISSR 263

Query: 180 IMQLAIGDALAIALLESRN 198
           + +L I D +   +     
Sbjct: 264 MAELTIIDTIYTGVALRLG 282


>gi|325273934|ref|ZP_08140098.1| RpiR family transcriptional regulator [Pseudomonas sp. TJI-51]
 gi|324100931|gb|EGB98613.1| RpiR family transcriptional regulator [Pseudomonas sp. TJI-51]
          Length = 288

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L          AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREHLDP---LALQQAVSAMAQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAVCISQSGRSKDLLITANLVRESGAN 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|298485071|ref|ZP_07003168.1| Transcriptional regulator, RpiR family [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|298160481|gb|EFI01505.1| Transcriptional regulator, RpiR family [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    +F  AV  +   +  +   G+G  S     +L + L   G P     
Sbjct: 98  ATLHQHLAGFDESRFAAAVACLSDAR-MIHAFGMGGCSSLCSEELQTRLVRLGYPVAACR 156

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +I  S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 157 DPVMMRMIAATLGPQHSLIACSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 215

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 216 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 256


>gi|257888754|ref|ZP_05668407.1| transcriptional regulator [Enterococcus faecium 1,141,733]
 gi|257824808|gb|EEV51740.1| transcriptional regulator [Enterococcus faecium 1,141,733]
          Length = 283

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 1/130 (0%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
               A++ +K  +  + + GIG S  +   L       G  + +V         L   T 
Sbjct: 119 ALQVAIDHVKRAQN-IYLFGIGASSLVSYDLFHKFNRAGRRASYVFDVHIGLEMLSYATT 177

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           DD++I +++SG + E+     YA+   +PLI IT  +   +   AD VL +P        
Sbjct: 178 DDVVIAVTYSGHTKEVLLACEYAKENKVPLIVITRNDGPKIKNLADEVLLVPGNEHLLRV 237

Query: 172 GLAPTTSAIM 181
           G   +  + M
Sbjct: 238 GAISSMYSSM 247


>gi|261403104|ref|YP_003247328.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
 gi|261370097|gb|ACX72846.1| CBS domain containing membrane protein [Methanocaldococcus
           vulcanius M7]
          Length = 189

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/133 (17%), Positives = 52/133 (39%), Gaps = 9/133 (6%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   L       +     + + +    + D    + E     + V+DE  K+ G++T  +
Sbjct: 31  KYRELQRMRVRDIMISGDVVVARPENTVKDVFESMVEYNINGIPVIDERGKIVGLVTIKE 90

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR--QHNISVLMVVDDC------ 323
           I      +   + +E VM+K+P     +  +  A + +      +  L V++        
Sbjct: 91  IRPYLA-NGTDVKIEMVMLKDPPYTTVNEDIITAFEKMINFDRRLDQLPVINTNSEEMPY 149

Query: 324 QKAIGIVHFLDLL 336
            K +G+V+  D++
Sbjct: 150 GKLVGVVYIEDII 162


>gi|257053089|ref|YP_003130922.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
 gi|256691852|gb|ACV12189.1| CBS domain containing membrane protein [Halorhabdus utahensis DSM
           12940]
          Length = 164

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/144 (22%), Positives = 51/144 (35%), Gaps = 40/144 (27%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V     + + +T L+   F    VV E   + G++TE D+                    
Sbjct: 15  VAPDDEISEVLTRLARADFNGFPVV-EDGAVVGVVTEEDLVDMFQPSNRVLWIPIGFPPF 73

Query: 274 ---RNFHKDLN--------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQ--HNI 314
              R +  DL+                 +  VM ++   +  D  L   + LL     NI
Sbjct: 74  LESRTYGFDLSWDDLDVGIDMVKSARKPISTVMTEDVVTVDPDADLDELLGLLADTSRNI 133

Query: 315 SVLMVVDDCQKAIGIVHFLDLLRF 338
           + L V+DD  + +GIV   DLL  
Sbjct: 134 NRLPVLDD-GQLVGIVTRQDLLTA 156



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 11/52 (21%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             DVM ++ + +  D  ++  +  L + + +   VV +    +G+V   DL+
Sbjct: 4   ARDVMTEDVETVAPDDEISEVLTRLARADFNGFPVV-EDGAVVGVVTEEDLV 54


>gi|268589723|ref|ZP_06123944.1| transcriptional regulator HexR [Providencia rettgeri DSM 1131]
 gi|291314953|gb|EFE55406.1| transcriptional regulator HexR [Providencia rettgeri DSM 1131]
          Length = 281

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL +++ +L        + AV+ +   + ++   G G S  +     +    
Sbjct: 97  KIFESAMAGLDNVKHTLD---ISAINRAVDLLTQAR-KISFFGFGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +                 D+I+++S +G +  L  +   AR     +IAITSE 
Sbjct: 153 FNIPVIYFDDIVMQRMSCINSNEGDVIVLISHTGRTKALVDMARLARENDATIIAITSE- 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            S ++  A + + +    ++  +   P  S + QLA+ D L       R     D
Sbjct: 212 NSPLSQAASLSIIIDVPEDTDIY--MPMVSRMAQLAVIDVLTTGFTLRRGEKFRD 264


>gi|22126810|ref|NP_670233.1| regulator [Yersinia pestis KIM 10]
 gi|45440727|ref|NP_992266.1| LacI family regulatory protein [Yersinia pestis biovar Microtus
           str. 91001]
 gi|51595632|ref|YP_069823.1| LacI family regulatory protein [Yersinia pseudotuberculosis IP
           32953]
 gi|108806965|ref|YP_650881.1| LacI family regulatory protein [Yersinia pestis Antiqua]
 gi|108812883|ref|YP_648650.1| LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|145599711|ref|YP_001163787.1| LacI-family regulatory protein [Yersinia pestis Pestoides F]
 gi|149366761|ref|ZP_01888795.1| putative LacI-family regulatory protein [Yersinia pestis CA88-4125]
 gi|162418357|ref|YP_001605991.1| RpiR family transcriptional regulator [Yersinia pestis Angola]
 gi|165924419|ref|ZP_02220251.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165936210|ref|ZP_02224779.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|166009723|ref|ZP_02230621.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166211304|ref|ZP_02237339.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|167400191|ref|ZP_02305704.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167419433|ref|ZP_02311186.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167424227|ref|ZP_02315980.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|170025031|ref|YP_001721536.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           YPIII]
 gi|186894698|ref|YP_001871810.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           PB1/+]
 gi|218928408|ref|YP_002346283.1| putative LacI family regulatory protein [Yersinia pestis CO92]
 gi|229841202|ref|ZP_04461361.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229843307|ref|ZP_04463453.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229894079|ref|ZP_04509265.1| putative LacI-family regulatory protein [Yersinia pestis Pestoides
           A]
 gi|229903312|ref|ZP_04518425.1| putative LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|270487116|ref|ZP_06204190.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294503260|ref|YP_003567322.1| putative LacI-family regulatory protein [Yersinia pestis Z176003]
 gi|21959838|gb|AAM86484.1|AE013895_6 putative regulator [Yersinia pestis KIM 10]
 gi|45435585|gb|AAS61143.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Microtus str. 91001]
 gi|51588914|emb|CAH20529.1| putative LacI-family regulatory protein [Yersinia
           pseudotuberculosis IP 32953]
 gi|108776531|gb|ABG19050.1| LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|108778878|gb|ABG12936.1| putative LacI-family regulatory protein [Yersinia pestis Antiqua]
 gi|115347019|emb|CAL19911.1| putative LacI-family regulatory protein [Yersinia pestis CO92]
 gi|145211407|gb|ABP40814.1| LacI-family regulatory protein [Yersinia pestis Pestoides F]
 gi|149291135|gb|EDM41210.1| putative LacI-family regulatory protein [Yersinia pestis CA88-4125]
 gi|162351172|gb|ABX85120.1| transcriptional regulator, RpiR family [Yersinia pestis Angola]
 gi|165915824|gb|EDR34432.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. IP275]
 gi|165923479|gb|EDR40611.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. F1991016]
 gi|165991119|gb|EDR43420.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. E1979001]
 gi|166207075|gb|EDR51555.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. B42003004]
 gi|166962174|gb|EDR58195.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Orientalis str. MG05-1020]
 gi|167050140|gb|EDR61548.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Antiqua str. UG05-0454]
 gi|167057076|gb|EDR66839.1| transcriptional regulator, RpiR family [Yersinia pestis biovar
           Mediaevalis str. K1973002]
 gi|169751565|gb|ACA69083.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           YPIII]
 gi|186697724|gb|ACC88353.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           PB1/+]
 gi|229679082|gb|EEO75185.1| putative LacI-family regulatory protein [Yersinia pestis Nepal516]
 gi|229689654|gb|EEO81715.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. India 195]
 gi|229697568|gb|EEO87615.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Orientalis str. PEXU2]
 gi|229703964|gb|EEO90977.1| putative LacI-family regulatory protein [Yersinia pestis Pestoides
           A]
 gi|262361299|gb|ACY58020.1| putative LacI-family regulatory protein [Yersinia pestis D106004]
 gi|262365163|gb|ACY61720.1| putative LacI-family regulatory protein [Yersinia pestis D182038]
 gi|270335620|gb|EFA46397.1| SIS domain protein [Yersinia pestis KIM D27]
 gi|294353719|gb|ADE64060.1| putative LacI-family regulatory protein [Yersinia pestis Z176003]
 gi|320015902|gb|ADV99473.1| putative LacI-family regulatory protein [Yersinia pestis biovar
           Medievalis str. Harbin 35]
          Length = 246

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E         ++I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDNVAKQIAATR-RVIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I       +  +I++T+   S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAVAIILSVSGETEEIIRIANQFSLQNCKIISLTNSESSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|328957791|ref|YP_004375177.1| uncharacterized HTH-type transcriptional regulator YbbH
           [Carnobacterium sp. 17-4]
 gi|328674115|gb|AEB30161.1| uncharacterized HTH-type transcriptional regulator YbbH
           [Carnobacterium sp. 17-4]
          Length = 283

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 68/180 (37%), Gaps = 4/180 (2%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
           SV   G++ ++       ++S +       S++ ++     F     VE I+A    + +
Sbjct: 79  SVDESGYAEIEAEEKSSTIKSKLL-ANAFKSMDETISLMNEFDIERVVELIEAAP-IIYV 136

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G S  I   +    +  G               LG   ++ L   +S SG + E+  
Sbjct: 137 YGVGNSRVIAENMVQKWSKVGKVFICPTDNHQLVSMLGAAPKNALFFGISNSGETREIIE 196

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  A++ SI  + +T   ++ +A  AD  +               +++   Q+   D +
Sbjct: 197 LIKLAKKNSIKTVGLTQFGQNSIANKADYTIQT--VKTIETDNQFISSALHAQMIAIDVI 254


>gi|298674088|ref|YP_003725838.1| CBS domain-containing protein [Methanohalobium evestigatum Z-7303]
 gi|298287076|gb|ADI73042.1| CBS domain containing protein [Methanohalobium evestigatum Z-7303]
          Length = 284

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/99 (28%), Positives = 49/99 (49%), Gaps = 6/99 (6%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
              + + IL +K+   V V+ +  K+ GI++      N  K      +  +M ++P  I 
Sbjct: 23  SREEVLEILKDKQVSGVPVI-KENKVVGIVS----RNNLLKYPEEEQLALLMTRDPVTIS 77

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            D  +TVA +LL  H++  L VVD  Q  +G+V   D++
Sbjct: 78  PDVDITVAARLLLDHDVRRLPVVDGDQ-LVGLVTIADVV 115



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 22/116 (18%), Positives = 49/116 (42%), Gaps = 1/116 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     +  A  +L +     + VVD G +L G++T  D+  +      T  +
Sbjct: 69  MTRDPVTISPDVDITVAARLLLDHDVRRLPVVD-GDQLVGLVTIADVVGSMADLNITDQI 127

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           +  +      + ++T L V  +++   N++V  V+D     +G++   D++   II
Sbjct: 128 DMYLNGGLVPVWDETPLPVVAKIMEFSNVNVSPVLDKSLGFVGLISDRDIISASII 183



 Score = 42.6 bits (99), Expect = 0.100,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + D+MIK+             +++L+   +S + V+    K +GIV   +LL++
Sbjct: 3   KNTKIRDIMIKDVAYATIPGSREEVLEILKDKQVSGVPVI-KENKVVGIVSRNNLLKY 59


>gi|257487184|ref|ZP_05641225.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 273

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|254169264|ref|ZP_04876097.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197621801|gb|EDY34383.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 185

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 50/127 (39%), Gaps = 4/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-I 272
                  +       +  +V     + +   IL +       ++++  K  GI+T+ D +
Sbjct: 2   ARAMKSITVEEVMSKNPRIVSGELTVEEGAKILKDLGI-STLIIEDDGKPVGIVTDRDFV 60

Query: 273 FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +   + L  +  + D+M     +I     L  A +++ +  I  L V+ D  K +GI+ 
Sbjct: 61  TKIIAEGLPPSTKLRDIMSTPIIMIPHKENLEDAAKIMTRRKIRKLPVIKDD-KIVGILS 119

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 120 ENDIARI 126



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 36/61 (59%), Gaps = 1/61 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + + +++VE+VM KNP+++  +  +    ++L+   IS L++ +D  K +GIV   D 
Sbjct: 1   MARAMKSITVEEVMSKNPRIVSGELTVEEGAKILKDLGISTLII-EDDGKPVGIVTDRDF 59

Query: 336 L 336
           +
Sbjct: 60  V 60


>gi|74317862|ref|YP_315602.1| hypothetical protein Tbd_1844 [Thiobacillus denitrificans ATCC
           25259]
 gi|74057357|gb|AAZ97797.1| conserved hypothetical protein containing CBS domain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 144

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +     +  A+  + E   G + VV +  ++ G++TE D+         DL    V  +M
Sbjct: 17  IAPTDRVESAVARMVELGVGSL-VVLKAGEMVGLLTERDVVHGMVEHGCDLKDTEVSAIM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +P V   D  +  A  ++ + +I  L ++D   K + I+ F D+ R 
Sbjct: 76  VTDPVVANADDSVDYARDVMTKSHIGHLPILD-GNKLLAIISFHDVARA 123


>gi|92117457|ref|YP_577186.1| CBS domain-containing protein [Nitrobacter hamburgensis X14]
 gi|91800351|gb|ABE62726.1| CBS domain containing membrane protein [Nitrobacter hamburgensis
           X14]
          Length = 146

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 11/126 (8%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----- 277
             +    +  V     + +   + +   F    VVD   ++ G++T+ D  + F      
Sbjct: 10  DRYMTRKVKTVSREVTMDELNGLFASDDFNAYPVVD-QSEVVGLVTKFDFLKCFALTVSS 68

Query: 278 -----KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 +L   +V DVMI +   +   T L   +QL+ +H +  + V+D  Q  +GI+  
Sbjct: 69  MVPRYDELMKRTVSDVMIHDFIYVNATTKLVRVLQLMVEHRLRSIPVMDTGQHLVGIIAR 128

Query: 333 LDLLRF 338
            D++R 
Sbjct: 129 EDVMRA 134



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 21/51 (41%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  V     L+  + ++ E R   + V+D GQ L GII   D+ R  
Sbjct: 85  MIHDFIYVNATTKLVRVLQLMVEHRLRSIPVMDTGQHLVGIIAREDVMRAL 135


>gi|30063264|ref|NP_837435.1| DNA-binding transcriptional regulator HexR [Shigella flexneri 2a
           str. 2457T]
 gi|30041516|gb|AAP17244.1| hypothetical protein S1929 [Shigella flexneri 2a str. 2457T]
          Length = 273

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        +  V+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRTVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+TS   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALTS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|331009198|gb|EGH89254.1| inosine 5'-monophosphate dehydrogenase [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 282

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 56/173 (32%), Gaps = 15/173 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKNMTIEQQAAEVRKVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    + D +  L+         V     L GI+T  D+     ++   + V +V
Sbjct: 96  DPITIEADATVRD-LFELTRMHNISGVPVLHNGDLVGIVTSRDVRF---ENRLDVPVREV 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M        + E        +LL +H +  +++VD      G++   D+ +  
Sbjct: 152 MTPKERLVTVREGADKNEVRELLHKHRLEKVLIVDANFALKGMMTVKDIEKAK 204


>gi|332364940|gb|EGJ42708.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK355]
          Length = 283

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/184 (16%), Positives = 62/184 (33%), Gaps = 4/184 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +    +  +  +    V +I     RV   G G SG +   +       G     +   
Sbjct: 101 QIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTDQ 160

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D  
Sbjct: 161 DGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDFT 217

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFV 218
             +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   + 
Sbjct: 218 EVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSYWENQKLNGYYR 277

Query: 219 CASD 222
             + 
Sbjct: 278 RNTH 281


>gi|153949960|ref|YP_001401695.1| RpiR family transcriptional regulator [Yersinia pseudotuberculosis
           IP 31758]
 gi|152961455|gb|ABS48916.1| transcriptional regulator, RpiR family [Yersinia pseudotuberculosis
           IP 31758]
          Length = 246

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E         ++I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDNVAKQIAATR-RVIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I       +  +I++T+   S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAVAIILSVSGETEEIIRIANQFSLQNCKIISLTNSESSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|70608066|ref|YP_256936.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           acidocaldarius DSM 639]
 gi|78099265|sp|Q4J6D9|GLMS_SULAC RecName: Full=Glucosamine--fructose-6-phosphate aminotransferase
           [isomerizing]; AltName: Full=D-fructose-6-phosphate
           amidotransferase; AltName: Full=GFAT; AltName:
           Full=Glucosamine-6-phosphate synthase; AltName:
           Full=Hexosephosphate aminotransferase; AltName:
           Full=L-glutamine-D-fructose-6-phosphate amidotransferase
 gi|68568714|gb|AAY81643.1| glucosamine-fructose-6-phosphate aminotransferase [Sulfolobus
           acidocaldarius DSM 639]
          Length = 590

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 61/140 (43%), Gaps = 5/140 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++ I    + +     SL  +L        E      GR+V+ G G S H G   +  L+
Sbjct: 259 IKEIHESPKSIRDTVDSLISDLDLIDKIIAEM--KSSGRIVVVGAGTSYHAGLYFSLLLS 316

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  SF + A+E  +       +DDLI  +S SG + +L   +   +     ++++T+ 
Sbjct: 317 REGMNSFPLIASEYYNFKA---KKDDLIFAISQSGETLDLLQAVRKFKEEGARIVSLTNV 373

Query: 148 NKSVVACHADIVLTLPKEPE 167
            +S +A  ++  + +   PE
Sbjct: 374 IESALARESNYKIYMRAGPE 393


>gi|116493797|ref|YP_805531.1| transcriptional regulator [Lactobacillus casei ATCC 334]
 gi|116103947|gb|ABJ69089.1| Transcriptional regulator [Lactobacillus casei ATCC 334]
          Length = 280

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 3/154 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 163 DYHMQLMAATHLGPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
                  E            + I +++I D L +
Sbjct: 223 AAFVAVAEESRYRTEAL--HALIAEISIMDTLFM 254


>gi|217970427|ref|YP_002355661.1| hypothetical protein Tmz1t_2015 [Thauera sp. MZ1T]
 gi|217507754|gb|ACK54765.1| CBS domain containing membrane protein [Thauera sp. MZ1T]
          Length = 368

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRN------FHKDLNTLS 284
           V    P+ +A  +L+  R   + VV+EG +L GI++  D  I R+        +      
Sbjct: 247 VGPQAPVGEAWALLAHHRIKALPVVEEGGRLVGIVSVPDFFIDRHNPEPQPVPRMRTARV 306

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M            L   +       +  L V D+  + +G++   D++  
Sbjct: 307 VAEIMSGRVHSARPGQSLADLVGAFSDGGLHHLPVADEDGRLVGMITQSDVVAA 360



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 25/57 (43%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +    L   D+M ++   +     +  A  LL  H I  L VV++  + +GIV   D
Sbjct: 229 RTWGALRCADIMSRDVVSVGPQAPVGEAWALLAHHRIKALPVVEEGGRLVGIVSVPD 285



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/77 (18%), Positives = 27/77 (35%), Gaps = 3/77 (3%)

Query: 203 DFYVLHPG---GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           DF++         +  +             +   + G  L D +   S+     + V DE
Sbjct: 285 DFFIDRHNPEPQPVPRMRTARVVAEIMSGRVHSARPGQSLADLVGAFSDGGLHHLPVADE 344

Query: 260 GQKLKGIITEGDIFRNF 276
             +L G+IT+ D+    
Sbjct: 345 DGRLVGMITQSDVVAAL 361


>gi|139436995|ref|ZP_01771155.1| Hypothetical protein COLAER_00129 [Collinsella aerofaciens ATCC
           25986]
 gi|133776642|gb|EBA40462.1| Hypothetical protein COLAER_00129 [Collinsella aerofaciens ATCC
           25986]
          Length = 503

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 8/167 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  + +AL      S                 V             L
Sbjct: 51  NIPMVSAIMQSVSGVDMGVALATEGGLSFIYGSQSAESEAAMVKAVKDHKAGFVQSDSTL 110

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
                 +   I +  +     + V D+G    KL GI+T  D   +  +D +   V + M
Sbjct: 111 -TPDMTMEQVIELKEKTGHSTMPVTDDGTPKGKLLGIVTSRDYRPS--RDDHQTKVSEFM 167

Query: 290 IKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                  V  ++  L VA  ++  + ++ L +VDD    +GIV   D
Sbjct: 168 TPREQLIVGDKNISLKVANDVIWDNKLNALPIVDDNDHLMGIVFRKD 214


>gi|172063448|ref|YP_001811099.1| CBS domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|171995965|gb|ACB66883.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MC40-6]
          Length = 391

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------------- 278
           V     +  A+T+L   R   + VVD   +L GI+T  D+ R   +              
Sbjct: 259 VAPSTSVAAALTVLERHRVKALPVVDGDARLIGIVTRADLTRQARRPTPLWQRLSARLPQ 318

Query: 279 --DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  VM ++   + +   LT  + L        + VVD  ++ +GI+   DL+
Sbjct: 319 SFGGQPPSVATVMTRDVASVPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 378



 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + + +    L+  D+M KN   +   T +  A+ +L +H +  L VVD   + IGIV  
Sbjct: 236 MQAYTRTFGQLTCADLMTKNAIEVAPSTSVAAALTVLERHRVKALPVVDGDARLIGIVTR 295

Query: 333 LDLLR 337
            DL R
Sbjct: 296 ADLTR 300



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
           V    PL   + + +      + VVD  ++L GIIT+ D+    ++    L   
Sbjct: 338 VPQTMPLTALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYRQTQMLEAA 391


>gi|238787684|ref|ZP_04631481.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
 gi|238724027|gb|EEQ15670.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
          Length = 277

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAVQTSAE---QLDRAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|134291147|ref|YP_001114916.1| CBS domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134134336|gb|ABO58661.1| CBS domain containing protein [Burkholderia vietnamiensis G4]
          Length = 143

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 40/113 (35%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     +  A  ++     G + V D   +L G++T+ D+  R          
Sbjct: 8   MSQDVVRIAPTDSIRHAAQLMERYDIGALPVCD-NNRLIGMVTDRDLAVRAISAGKPPET 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +V    P      D  L      +    +  L VVD  ++ +G++   D+
Sbjct: 67  RVHEVAS-GPIEWCFVDDSLDEIQHYMADAQLRRLPVVDHDKRLVGMLSLADI 118



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   I     +  A QL+ +++I  L V D+  + IG+V   DL
Sbjct: 4   VNEIMSQDVVRIAPTDSIRHAAQLMERYDIGALPVCDN-NRLIGMVTDRDL 53


>gi|315659456|ref|ZP_07912318.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus lugdunensis
           M23590]
 gi|315495439|gb|EFU83772.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus lugdunensis
           M23590]
          Length = 416

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             V  +  +   V     L DA+ I+ E+R   + VV+   +L G +   DI +   +  
Sbjct: 249 KTVEGAMITPVTVHADDSLNDAVNIMRERRVDTIFVVNNQNRLLGFLDIEDINQGLRRGE 308

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   D+M ++   +  DT L  +++ + + N+  + VVDD    IG++   +L+
Sbjct: 309 ELI---DMMQRDVYKVHIDTKLQDSVRTILKRNVRNVPVVDDDNTLIGLITRANLV 361



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE  MI  P  +  D  L  A+ ++R+  +  + VV++  + +G +   
Sbjct: 240 RLIQDRPNMKTVEGAMIT-PVTVHADDSLNDAVNIMRERRVDTIFVVNNQNRLLGFLDIE 298

Query: 334 DL---LRFG 339
           D+   LR G
Sbjct: 299 DINQGLRRG 307


>gi|289623036|gb|ADD13515.1| transcriptional regulator [Lactobacillus casei]
          Length = 247

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 1/130 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 71  IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 129

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      ++  D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 130 DYHMQLMAATHLSPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 189

Query: 158 IVLTLPKEPE 167
                  E  
Sbjct: 190 AAFVAVAEES 199


>gi|289549915|ref|YP_003470819.1| Osmotically activated L-carnitine/choline ABC transporter,
           ATP-binding protein OpuCA [Staphylococcus lugdunensis
           HKU09-01]
 gi|289179447|gb|ADC86692.1| Osmotically activated L-carnitine/choline ABC transporter,
           ATP-binding protein OpuCA [Staphylococcus lugdunensis
           HKU09-01]
          Length = 416

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 54/116 (46%), Gaps = 3/116 (2%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             V  +  +   V     L DA+ I+ E+R   + VV+   +L G +   DI +   +  
Sbjct: 249 KTVEGAMITPVTVHADDSLNDAVNIMRERRVDTIFVVNNQNRLLGFLDIEDINQGLRRGE 308

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             +   D+M ++   +  DT L  +++ + + N+  + VVDD    IG++   +L+
Sbjct: 309 ELI---DMMQRDVYKVHIDTKLQDSVRTILKRNVRNVPVVDDDNTLIGLITRANLV 361



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 18/69 (26%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE  MI  P  +  D  L  A+ ++R+  +  + VV++  + +G +   
Sbjct: 240 RLIQDRPNMKTVEGAMIT-PVTVHADDSLNDAVNIMRERRVDTIFVVNNQNRLLGFLDIE 298

Query: 334 DL---LRFG 339
           D+   LR G
Sbjct: 299 DINQGLRRG 307


>gi|212635194|ref|YP_002311719.1| DNA-binding transcriptional regulator HexR [Shewanella
           piezotolerans WP3]
 gi|212556678|gb|ACJ29132.1| Transcriptional regulator, RpiR family [Shewanella piezotolerans
           WP3]
          Length = 284

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 63/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSIDTTAINKAVDVLTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVISF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIDIAKLARENGAAVIGITAR-NSPLSTVC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL I D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVIIDVLATGFTLRRG 259


>gi|320160472|ref|YP_004173696.1| hypothetical protein ANT_10620 [Anaerolinea thermophila UNI-1]
 gi|319994325|dbj|BAJ63096.1| hypothetical protein ANT_10620 [Anaerolinea thermophila UNI-1]
          Length = 892

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 2/125 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +    +       +   V       +A+  +    F    VV E  K+ G++    + 
Sbjct: 310 RFIRPAVTVSQIMSANPLTVPPKMTAGEALKWMERYGFEGYPVV-EDGKVVGLLNRRAVE 368

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHF 332
           R     L+TL+V  +M      +  D  +     ++ Q     + VVD      +GIV  
Sbjct: 369 RAVAHKLSTLTVTSLMEVGSVFVYPDDPIERVRDVMAQSGWGQVPVVDRQIGNVVGIVTR 428

Query: 333 LDLLR 337
            DLLR
Sbjct: 429 TDLLR 433



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 32/163 (19%), Positives = 58/163 (35%), Gaps = 23/163 (14%)

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L Y      PL AI  E  +V+       +T+ +   + P  + P  +A           
Sbjct: 287 LPYQESGESPLEAIKREILNVLPRFIRPAVTVSQIMSANPLTVPPKMTAGE--------- 337

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL------------VKIGCP 238
            AL     +    + V+  G  +G L   A +   +     L            V    P
Sbjct: 338 -ALKWMERYGFEGYPVVEDGKVVGLLNRRAVERAVAHKLSTLTVTSLMEVGSVFVYPDDP 396

Query: 239 LIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDL 280
           +     ++++  +G V VVD     + GI+T  D+ R+   ++
Sbjct: 397 IERVRDVMAQSGWGQVPVVDRQIGNVVGIVTRTDLLRHISGEV 439


>gi|254294845|ref|YP_003060868.1| RpiR family transcriptional regulator [Hirschia baltica ATCC 49814]
 gi|254043376|gb|ACT60171.1| transcriptional regulator, RpiR family [Hirschia baltica ATCC
           49814]
          Length = 297

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 40/155 (25%), Positives = 57/155 (36%), Gaps = 3/155 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            +L  +L          AV+ I++   RV I GIG S  I       +   G  +  V  
Sbjct: 122 EALRETLSILDPDAISMAVDVIRSAD-RVEIYGIGSSAPIAEDAQYRMLRIGLDAKVVVD 180

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +            +  ++ +S SGS+ E  A    AR      I IT+   S +  +AD+
Sbjct: 181 SHIQAISASRTGPNVAVLTISHSGSTHETLAATRLARDAGAKTIIITNFASSPLQAYADV 240

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            L                TS I QL I D L  AL
Sbjct: 241 KLYT--MARETKFRSEAMTSRIAQLCILDVLIAAL 273


>gi|238761267|ref|ZP_04622244.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
 gi|238761520|ref|ZP_04622496.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
 gi|238700494|gb|EEP93235.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
 gi|238700747|gb|EEP93487.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
          Length = 277

 Score = 68.0 bits (165), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAVQTSAE---QLDKAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|229169395|ref|ZP_04297105.1| Acetoin utilization protein AcuB [Bacillus cereus AH621]
 gi|228614158|gb|EEK71273.1| Acetoin utilization protein AcuB [Bacillus cereus AH621]
          Length = 214

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPDDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  D  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPDDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|299535451|ref|ZP_07048773.1| hypothetical protein BFZC1_05503 [Lysinibacillus fusiformis ZC1]
 gi|298729212|gb|EFI69765.1| hypothetical protein BFZC1_05503 [Lysinibacillus fusiformis ZC1]
          Length = 435

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 4/91 (4%)

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
               G   VV    KL G+IT  D+     ++ N L +E VM KNP        +  A  
Sbjct: 219 RTTHGAFPVVTHQNKLVGMITVKDV---IGREENEL-IEKVMTKNPIAGSMKMSVASAGH 274

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    I +L +VDD     G++   D+L+ 
Sbjct: 275 RMIWEGIDLLPIVDDDNILQGVISRQDVLKA 305


>gi|220909791|ref|YP_002485102.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425]
 gi|219866402|gb|ACL46741.1| signal transduction histidine kinase [Cyanothece sp. PCC 7425]
          Length = 767

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 47/106 (44%), Gaps = 6/106 (5%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKN 292
              P+  AI  L++    C+ VV E  K+ GI T  +  +      DL+   ++  M   
Sbjct: 21  PETPVRVAIAQLNQCSASCLLVV-EAAKVVGIFTRSNALKLMAAGADLSQTDLKTGMTCP 79

Query: 293 PK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                +     +  A  L++QH I  L ++DD  + +G+V   D+L
Sbjct: 80  VISLTLSPRQTVITAFSLMQQHQIRHLPILDDRGQLLGLVT-QDVL 124


>gi|191639716|ref|YP_001988882.1| Transcriptional regulator [Lactobacillus casei BL23]
 gi|190714018|emb|CAQ68024.1| Transcriptional regulator [Lactobacillus casei BL23]
 gi|327383830|gb|AEA55306.1| Transcriptional regulator, RpiR family [Lactobacillus casei LC2W]
 gi|327387009|gb|AEA58483.1| Transcriptional regulator, RpiR family [Lactobacillus casei BD-II]
          Length = 310

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++++              A+  ++  +  + + G+  S  +   L   L   G  + F 
Sbjct: 105 AIAAVRDLPDELDQSAVQSAITTLRQAR-HIYLVGVSASALVAQDLYLKLIRAGYVAIFD 163

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H    +       T  D ++V S+SG + E+      ARR   P+IA+T    S +   A
Sbjct: 164 HDTHTAVERAYYTTPADAMVVFSYSGLTKEVVLAAQQARRNRTPVIAVTRHEPSPLREAA 223

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             V+ LP  P      +   TS   +  + + L + +++
Sbjct: 224 SCVIALP--PTEPLLRIGAVTSMFTETYVANILFLGVVQ 260


>gi|15965170|ref|NP_385523.1| hypothetical protein SMc01002 [Sinorhizobium meliloti 1021]
 gi|307309184|ref|ZP_07588855.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti BL225C]
 gi|307321514|ref|ZP_07600909.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti AK83]
 gi|15074350|emb|CAC45996.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
 gi|306892821|gb|EFN23612.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti AK83]
 gi|306900330|gb|EFN30946.1| putative signal transduction protein with CBS domains
           [Sinorhizobium meliloti BL225C]
          Length = 142

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 26/109 (23%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     +  A ++L E   G V VVD  + + GI+TE DI  +  +         V  VM
Sbjct: 17  VTAQVTVQQAASLLHENHIGAVVVVDPEEHIVGIMTERDIVASIARYGAACLDKPVSSVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +N     E+  +   M+++ +     L V +   +  GI+   D++++
Sbjct: 77  WQNVYCCREEMSVDSLMEMMSKFRARHLPV-EREGRLAGIISIGDVVKY 124



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 23/45 (51%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           N   +     +  A  LL +++I  ++VVD  +  +GI+   D++
Sbjct: 13  NVITVTAQVTVQQAASLLHENHIGAVVVVDPEEHIVGIMTERDIV 57


>gi|324990781|gb|EGC22716.1| CBS domain protein [Streptococcus sanguinis SK353]
          Length = 209

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 5/117 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHK 278
             +V     S  LV     + DAI  L       + V+DE + L GI++  D+ R   + 
Sbjct: 74  RKEVAEIMTSPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGILSRKDLLRASLNT 133

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
           ++++  V   M +  + K   +D  +  A  +L+   I  L VVD     K +G V 
Sbjct: 134 NIDSTPVAVCMTRMLHIKTCYKDMNILEAAAVLQDFAIDSLPVVDKDNERKILGTVT 190



 Score = 43.3 bits (101), Expect = 0.051,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D     V ++M  +P ++  D+ +  A+  L  ++  VL V+D+ +  +GI+
Sbjct: 63  DLETLFFFDTFRKEVAEIMT-SPVLVSHDSFIQDAIITLFMYDADVLYVIDEHKLLLGIL 121

Query: 331 HFLDLLRF 338
              DLLR 
Sbjct: 122 SRKDLLRA 129


>gi|149910648|ref|ZP_01899285.1| cyclic nucleotide binding protein [Moritella sp. PE36]
 gi|149806275|gb|EDM66251.1| cyclic nucleotide binding protein [Moritella sp. PE36]
          Length = 625

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 52/111 (46%), Gaps = 9/111 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVD------EGQKLKGIITEGDI-FRNFHKDLN-TLSVED 287
              + D   +++E+      + D      +G  L GIIT+ D+  +     ++    V D
Sbjct: 167 TTSIQDVAKVMAEESVSAALINDPTIIHEDGSNLVGIITQHDLCAKVIATGMSVDNPVSD 226

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM      +  +  ++ AM ++ ++N+  L ++   ++ IG++   D++R+
Sbjct: 227 VMSTELMSLDHNAYVSEAMLMMLRYNVHHLPIL-KNKQPIGLIEVADIIRY 276


>gi|304310400|ref|YP_003809998.1| hypothetical protein HDN1F_07560 [gamma proteobacterium HdN1]
 gi|301796133|emb|CBL44339.1| hypothetical protein HDN1F_07560 [gamma proteobacterium HdN1]
          Length = 169

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 46/112 (41%), Gaps = 6/112 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDV 288
           V    PL DA+  L   +   + VV+   ++ G ++E D   +             V +V
Sbjct: 37  VMPETPLDDAVNQLLASKLDGIPVVNAQGQMVGFLSEQDCITSMLNASYYCDTRTQVSEV 96

Query: 289 MIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M++ P   V+     +    + + ++   V  V+    K +G++   D+LR 
Sbjct: 97  MVQQPTVVVVNARDTVVEVAEKMIRNRHHVYPVMGGDGKLVGVISRTDILRA 148



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 14/66 (21%), Positives = 26/66 (39%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                S+VM    ++ +V     +++    +   R     V+    KL G+I+  DI R 
Sbjct: 89  TRTQVSEVMVQQPTVVVVNARDTVVEVAEKMIRNRHHVYPVMGGDGKLVGVISRTDILRA 148

Query: 276 FHKDLN 281
               L+
Sbjct: 149 LQAHLS 154


>gi|257415084|ref|ZP_05592078.1| transcriptional regulator [Enterococcus faecalis AR01/DG]
 gi|257156912|gb|EEU86872.1| transcriptional regulator [Enterococcus faecalis ARO1/DG]
          Length = 253

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAI 63
            +   G S +K +  + A ++   E        +++ L    Q         A++ I   
Sbjct: 53  KMGYAGFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQA 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 113 R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 169

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 170 TNEMIKQMTDLKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 229

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 230 VIALIELLA 238


>gi|229822475|ref|YP_002884001.1| RpiR family transcriptional regulator [Beutenbergia cavernae DSM
           12333]
 gi|229568388|gb|ACQ82239.1| transcriptional regulator, RpiR family [Beutenbergia cavernae DSM
           12333]
          Length = 312

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/154 (20%), Positives = 57/154 (37%), Gaps = 5/154 (3%)

Query: 15  GHSLMKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           G +L  + T    LR+++ A  R L +  + L          A+ + + +     I G G
Sbjct: 102 GRTLDPDDTPSDVLRTLLNAHVRSLRATATQLDLVQCAYVAAAISRCRHLD----IYGTG 157

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  +  ++   L   G  + +            +  +D + I +S SG + E   ++  
Sbjct: 158 GSATMAEEMTGRLYRIGIETHWWSDVHNGLSSASIQDKDCVAIGISNSGRTKETIEMVAE 217

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           A+      +AITS   S +   AD  L       
Sbjct: 218 AKAAGAFTVAITSRVASPLGQLADACLVASVPAR 251


>gi|199597941|ref|ZP_03211366.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
 gi|258507268|ref|YP_003170019.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus GG]
 gi|199591198|gb|EDY99279.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
 gi|257147195|emb|CAR86168.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus GG]
 gi|259648634|dbj|BAI40796.1| transcriptional regulator [Lactobacillus rhamnosus GG]
          Length = 280

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 33/171 (19%), Positives = 63/171 (36%), Gaps = 2/171 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    S     AV+ I     ++ + G+G S  +          T  P  +  
Sbjct: 104 IDALRTTLTNLDSAALTKAVDWITHA-NQLGLFGLGASNLVALDGYHKFLRTAIPVVYAA 162

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T  D +I+ S SG   +  A+   A++ ++PLI IT    S +A  AD
Sbjct: 163 DYHMQLMAATHLTVADAMILTSHSGKDKDAIALAELAKKQNVPLIVITGAPGSHLAKMAD 222

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
               +    ES     A          +     I+ +++ + +   F  + 
Sbjct: 223 AAF-VAVAEESRYRTEALHALIAELSLMDTLFMISAIQTNSQTAPLFRRVR 272


>gi|254425959|ref|ZP_05039676.1| PAS fold family [Synechococcus sp. PCC 7335]
 gi|196188382|gb|EDX83347.1| PAS fold family [Synechococcus sp. PCC 7335]
          Length = 1186

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 12/182 (6%)

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESR--NFSENDFYVLHPGGKLGTLFVCASDVMH 225
                    TS    +       I L +     F+E D   L       +    ++ +  
Sbjct: 50  DSSLQPDAGTSEFEAIGRFSCALIVLADRLLGIFTERDLVRLVAEDADLSAMPISAAMTQ 109

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTL 283
               +   +IG  +   ++ L +     V +V++   L GI+T+  + R       L   
Sbjct: 110 PVKVLRRSQIGT-VFTVLSYLKQNHIRQVPIVEDSGSLVGIVTQTTVRRAMQPFNFLKVR 168

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-------QKAIGIVHFLDLL 336
            V DVM       L    LT   Q + Q  +S +++ +         +K IGI+   D++
Sbjct: 169 QVGDVMSTAVVTALPGQNLTAIAQQMHQRRVSCVVITEAKCQSGQSLKKPIGIITERDIV 228

Query: 337 RF 338
           +F
Sbjct: 229 QF 230



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 22/148 (14%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITIL-----------------S 247
            +     +        +           V     +   I  +                 +
Sbjct: 5   KLTEKQKEKQRNLQLLNLEQILDRQPLRVSPDTAIASVIECMGIVDSSLQPDAGTSEFEA 64

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDT--LLT 303
             RF C  +V    +L GI TE D+ R   +D  L+ + +   M +  KV+       + 
Sbjct: 65  IGRFSCALIVLAD-RLLGIFTERDLVRLVAEDADLSAMPISAAMTQPVKVLRRSQIGTVF 123

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             +  L+Q++I  + +V+D    +GIV 
Sbjct: 124 TVLSYLKQNHIRQVPIVEDSGSLVGIVT 151



 Score = 56.8 bits (136), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 27/158 (17%), Positives = 51/158 (32%), Gaps = 21/158 (13%)

Query: 188 ALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILS 247
            +       R     +F  +   G + +              +     G  L      + 
Sbjct: 148 GIVTQTTVRRAMQPFNFLKVRQVGDVMSTA------------VVTALPGQNLTAIAQQMH 195

Query: 248 EKRFGCVAVVDEG-------QKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILE 298
           ++R  CV + +         +K  GIITE DI +       L+    + VM     ++  
Sbjct: 196 QRRVSCVVITEAKCQSGQSLKKPIGIITERDIVQFQAMGLPLSETLAQAVMSTPLFLVTP 255

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              L    +++   +   L+V D   +  GI+    LL
Sbjct: 256 QDTLWSVNRMMEARHTRRLVVGDHAGRLAGIITQTSLL 293


>gi|156039836|ref|XP_001587025.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
 gi|154696111|gb|EDN95849.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
           UF-70]
          Length = 550

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 63/187 (33%), Gaps = 17/187 (9%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++VL  P           P  S+ M       +AI +            V+H       
Sbjct: 73  SEVVLDSPVTKRITL--KTPFVSSPMDTVTEHDMAIHMALQGGLG-----VIHHNCSADE 125

Query: 216 LFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V    +   L          + +   +  +  FG   V + G+   KL GI+T
Sbjct: 126 QAEMVQKVKRYENGFILDPVVLSPQATVAEVKALKEKWGFGGYPVTETGKLGSKLVGIVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     +D ++ +V  VM+ +       T L  A  +L +     L +VD     + 
Sbjct: 186 NRDIQF---EDDDSATVASVMVTDLVTASYGTELVEANAILAKSKKGKLPIVDKNGNLVS 242

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 243 MISRSDL 249


>gi|27365570|ref|NP_761098.1| putative signal transduction protein [Vibrio vulnificus CMCP6]
 gi|27361718|gb|AAO10625.1| Predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus CMCP6]
          Length = 625

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 53/119 (44%), Gaps = 8/119 (6%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQK--LKGIITEGDI-FRNFHKDL 280
             + P +     +  A   +++++   + V+   DE  +  + GI+T+ D+  R   +  
Sbjct: 157 TRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGK 216

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    V  VM      +  +  +  AM  + +HN+  L ++    + +GI+   D++R+
Sbjct: 217 SPNEPVASVMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPIL-QGNRLLGIIEATDIVRY 274



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQK--AIGIVH 331
             DL T  V  ++ +    I     +  A Q +    +S L+V+   D+  +    GIV 
Sbjct: 144 ANDLTTSKVRTLLTRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVT 203

Query: 332 FLDL 335
             DL
Sbjct: 204 DRDL 207


>gi|295132927|ref|YP_003583603.1| 6-phospho 3-hexuloisomerase [Zunongwangia profunda SM-A87]
 gi|294980942|gb|ADF51407.1| 6-phospho 3-hexuloisomerase [Zunongwangia profunda SM-A87]
          Length = 194

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/198 (18%), Positives = 72/198 (36%), Gaps = 10/198 (5%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           MKN     +  SI      + +   +L   L+F+    +E+      R+ + G G++G +
Sbjct: 1   MKNRNNANSRISIQKAYDIIINEHVNLYHSLNFENIETIEEALKNADRIFLIGAGRTGFM 60

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
                  L   G     V            I +DDL+I +S SG++  +      A +  
Sbjct: 61  VKAATMRLMHLGYQVHVVGETTTP-----AIGKDDLLIAVSGSGTTKSIINAAETASKNE 115

Query: 139 IPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP---TTSAIMQLAIG--DALAIAL 193
             ++  T+ + S +A  ++  + +P   +             S   Q  +   DAL   L
Sbjct: 116 AQIVCFTTNDSSPLAQLSNYTVLIPAAGKQEHKNAISQQYAGSLFEQGFLLLFDALIQYL 175

Query: 194 LESRNFSENDFYVLHPGG 211
            +  + S    + +H   
Sbjct: 176 WKQSDNSAEQLWKMHANM 193


>gi|261212571|ref|ZP_05926856.1| helix-turn-helix protein RpiR [Vibrio sp. RC341]
 gi|260838502|gb|EEX65158.1| helix-turn-helix protein RpiR [Vibrio sp. RC341]
          Length = 281

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 3/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S++E S+    +       +++     ++ + GIG S  + + +   L   G    F  
Sbjct: 108 VSTIEQSIGLMDAESVEQCAQQLLKA-NKIALAGIGASAIVAADINHKLIRAGFNVQFNQ 166

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++  DD+++V+S  G++ E+   +  A++    +IA+T   +  VA  AD
Sbjct: 167 DYHIQIVQASLLKADDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLAD 226

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            V+      E    G+   T  ++Q+A  D +   L+
Sbjct: 227 YVIPYSYTEEHSQLGMV--TPQLLQMAAFDIVFFKLI 261


>gi|298206971|ref|YP_003715150.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
           atlanticus HTCC2559]
 gi|83849605|gb|EAP87473.1| Inosine monophosphate dehydrogenase-related protein [Croceibacter
           atlanticus HTCC2559]
          Length = 154

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 49/112 (43%), Gaps = 7/112 (6%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------LNTLSVEDV 288
               +++ I  L + +     VV++  +L GII+EGD  +           ++  +VE  
Sbjct: 36  PSQNVMEVIQTLVKHKISGGPVVNDQNELVGIISEGDCIKQISDSRYHNLPMDDATVEKH 95

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           M+++ + I  +  +  A             +V++  K +G++   D+L+  +
Sbjct: 96  MVRDVETIDGNMNIFDAANQFLSAKRRRFPIVEE-GKLVGLISQKDILKAAL 146



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++V D M +          +   +Q L +H IS   VV+D  + +GI+   D ++
Sbjct: 20  QITVSDYMSRKLVTFTPSQNVMEVIQTLVKHKISGGPVVNDQNELVGIISEGDCIK 75


>gi|12003348|gb|AAG43530.1|AF211851_1 OpuCA [Listeria monocytogenes]
          Length = 169

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 36/109 (33%), Positives = 50/109 (45%), Gaps = 9/109 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L  AIT++ EKR   + VVDEG  LKG I    I      DLN  + 
Sbjct: 27  MNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFIDVEQI------DLNRRTA 80

Query: 286 EDVM---IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             VM    KN   + EDTLL   +Q + +     + VVD  ++ +GIV 
Sbjct: 81  TSVMDMIEKNVFYVYEDTLLRDTVQRILKRGYKYIPVVDKDKRLVGIVT 129



 Score = 56.1 bits (134), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  NP  I  D  L  A+ ++++  +  L+VVD+     G +
Sbjct: 12  RLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMKEKRVDTLLVVDEGNVLKGFI 68


>gi|302039415|ref|YP_003799737.1| hypothetical protein NIDE4144 [Candidatus Nitrospira defluvii]
 gi|300607479|emb|CBK43812.1| conserved protein of unknown function, contains CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 136

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 42/118 (35%), Gaps = 5/118 (4%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDL 280
           M        V     L+     L + R G + V D      GI++E D+ R         
Sbjct: 14  MMMRPITRTVHPDDTLLAVARQLRDARVGAMLVAD-HGDYVGIVSEADLVRKAMASGAAA 72

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +    VM      I        A  ++ +  I  L V+ +  + +G++   DLLR+
Sbjct: 73  EQVMARSVMSAPVMTIDIARSAHEASDVMAERGIRHL-VITEEGRVVGMISVRDLLRY 129


>gi|221488565|gb|EEE26779.1| inosine-5'-monophosphate dehydrogenase, putative [Toxoplasma gondii
           GT1]
          Length = 921

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLF 217
           + L        H   P  S+ M       +AI  AL+       N+        ++  + 
Sbjct: 407 VDLSTRITRNLHVRTPIVSSPMDTVTEHRMAIGCALMGGMGVIHNNMETARQVAEVQKVK 466

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFR 274
              +  +       +++    + D   I  +  +  V + D G    KL GI+T  DI  
Sbjct: 467 RYENGFI---LDPFVLRPSDSVADVYRIKEKYGYSSVPITDTGMLGGKLLGIVTSRDI-- 521

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +F  D++T  + +VM  +  V  E   L  A +LLR+     L +V+D  + + ++   D
Sbjct: 522 DFLTDVHT-PLSEVMTSDLVVGHEPVQLAEANELLRESKKGKLPIVNDNFELVALISRND 580

Query: 335 LLR 337
           L +
Sbjct: 581 LKK 583


>gi|254254157|ref|ZP_04947474.1| hypothetical protein BDAG_03447 [Burkholderia dolosa AUO158]
 gi|124898802|gb|EAY70645.1| hypothetical protein BDAG_03447 [Burkholderia dolosa AUO158]
          Length = 515

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 47/120 (39%), Gaps = 16/120 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           V     +  AI +L   R   + VVD   +L GI+T  D+ R   + +            
Sbjct: 383 VAPSTSIAAAIALLDRHRVKALPVVDADARLIGIVTRADLTRQTRRPIPLWQRLSARLPQ 442

Query: 284 -------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  SV  +M ++   + E   +T  + L        + VVD  ++ +GI+   DL+
Sbjct: 443 SLGGQPASVATMMTRDVASVPETLPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLV 502



 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/63 (31%), Positives = 30/63 (47%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +    L   D+M K+   +   T +  A+ LL +H +  L VVD   + IGIV   D
Sbjct: 362 AYTRTFGQLKCADLMTKDAVSVAPSTSIAAAIALLDRHRVKALPVVDADARLIGIVTRAD 421

Query: 335 LLR 337
           L R
Sbjct: 422 LTR 424



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 12/63 (19%), Positives = 24/63 (38%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
                 +  V    P+   + + +      + VVD  ++L GIIT+ D+    ++    L
Sbjct: 453 TMMTRDVASVPETLPITALVPLFTHSGHHHIPVVDASRRLVGIITQTDLVTGLYQQTRML 512

Query: 284 SVE 286
              
Sbjct: 513 EAA 515


>gi|123444203|ref|YP_001008172.1| hypothetical protein YE4029 [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|332163368|ref|YP_004299945.1| hypothetical protein YE105_C3748 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|122091164|emb|CAL14047.1| conserved hypothetical protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|318607864|emb|CBY29362.1| putative transcriptional regulator of the myo-inositol catabolic
           operon [Yersinia enterocolitica subsp. palearctica Y11]
 gi|325667598|gb|ADZ44242.1| hypothetical protein YE105_C3748 [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330862217|emb|CBX72379.1| hypothetical protein YEW_DQ15800 [Yersinia enterocolitica W22703]
          Length = 277

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 121 AQALQQLAVQTSAE---QLDRAVELLNNAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 176

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 177 LIDGLGGMFAEQLSMVKPKDVVIAISYSPYAQEALELVELGAKSGAQQIAITDSQVSPLA 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  ++
Sbjct: 237 AFSDVCF---VVREAQVDGFRSQVASMC-LAQTLAVSLALNNAK 276


>gi|150019456|ref|YP_001311710.1| sugar isomerase (SIS) [Clostridium beijerinckii NCIMB 8052]
 gi|149905921|gb|ABR36754.1| sugar isomerase (SIS) [Clostridium beijerinckii NCIMB 8052]
          Length = 180

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/180 (17%), Positives = 70/180 (38%), Gaps = 12/180 (6%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTP 92
           R +  +   ++  +S      ++KI  +   + ++ + G G+SG      A  L   G  
Sbjct: 2   RIIDKILEEIKDVISKVDEEEIKKIMGVFQKERKIFVDGEGRSGFQAKGFAMRLMHIGYN 61

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           S+ +            + + D+ + +S SG +    +    A+   + ++ +TS+  S +
Sbjct: 62  SYVMGETITP-----ALKKGDIYVAISGSGKTKNTLSNAKAAKDLGLTIVGVTSKKDSPL 116

Query: 153 ACHADIVLTLP----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           A  +D VL +P     +       L  +        + D L + +    N S+++    H
Sbjct: 117 AEVSDFVLEVPGKTKNDTGVSSIQLLSSLFDQSVHIVLDDLCLLMSRRDNLSDSEAAKNH 176


>gi|57168240|ref|ZP_00367379.1| Mannose-1-phosphate guanyltransferase [Campylobacter coli RM2228]
 gi|57020614|gb|EAL57283.1| Mannose-1-phosphate guanyltransferase [Campylobacter coli RM2228]
          Length = 341

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E+T     ++L  + +I    V+D+  + + I     LL+
Sbjct: 70  ITIKENTSKEELLKLSAKTDIYDFPVLDEKGQILSIKSVSSLLK 113


>gi|254413672|ref|ZP_05027442.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196179779|gb|EDX74773.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1341

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGI 266
                 V     LI  I +L+     C                      +V E  +L G+
Sbjct: 5   DYHPLTVTPDTCLIHVIALLNPGTHACPFPDGTGSFASTYSEGIDESCVLVIENGQLVGV 64

Query: 267 ITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLLT--VAMQLLRQHNISVLMVVDD 322
           IT  D+ +   +   L  L V +VM +    + +  L      + L   H I  L +V+D
Sbjct: 65  ITLRDLVQIVAERSPLENLPVAEVMTQPVITLKQSELRDGFKMLNLFECHGIRHLPIVND 124

Query: 323 CQKAIGIVH 331
             + +G+V 
Sbjct: 125 DNQVVGVVT 133



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 47/151 (31%), Gaps = 22/151 (14%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ------ 261
           H       L             I  +     ++     ++E     V + ++ +      
Sbjct: 138 HHAMPSMELLKRRRVADVMTPEIINITPTNSVLTVAQRIAEHGVNYVVICEQQENSHTEP 197

Query: 262 -------------KLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
                           GIITE DI +      DLN L    +M      +  +  L  A 
Sbjct: 198 SPLSKSVDSRPFFVPLGIITERDIIQFQALELDLN-LPAYTLMSFPLLCVNPEESLWTAH 256

Query: 307 QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           Q ++Q  +  L V     + +G+V    +L+
Sbjct: 257 QKMQQWRVQQLGVCSHQGELLGMVTQTSILQ 287


>gi|254415827|ref|ZP_05029584.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196177254|gb|EDX72261.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1218

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 8/101 (7%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILED-- 299
            ++ + R  CV V+ +G +L G++TE D  R      +L+ L+  DVM +   ++     
Sbjct: 64  RLMKQARTSCVLVM-QGMQLLGLLTEQDFVRLAALDINLDALTAADVMTRKLVILNASDC 122

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH---FLDLLR 337
             +T+ + L +QH I  L + ++    +GIV       LL+
Sbjct: 123 QDVTIILNLFQQHGIHHLPIFNESGYLLGIVTPQRMRHLLQ 163



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 27/178 (15%), Positives = 56/178 (31%), Gaps = 13/178 (7%)

Query: 151 VVACHADIVLTLP-KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF-SENDFYVLH 208
           ++A  A    TL   +  +      P    + Q      L +  ++     +E DF    
Sbjct: 36  LIAQEAGCDCTLGLSDTSTKSCHPLPDWRLMKQARTSCVLVMQGMQLLGLLTEQDFVR-- 93

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCP----LIDAITILSEKRFGCVAVVDEGQKLK 264
                       +       +  LV +       +   + +  +     + + +E   L 
Sbjct: 94  ---LAALDINLDALTAADVMTRKLVILNASDCQDVTIILNLFQQHGIHHLPIFNESGYLL 150

Query: 265 GIITEGDIFRNFHK-DLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           GI+T   +       D+  L SV +VM            +    QL+  H +  +++V
Sbjct: 151 GIVTPQRMRHLLQMTDVMGLHSVAEVMTTQVICAPPTAPVQKLAQLMATHGVGYVVIV 208



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 45/129 (34%), Gaps = 24/129 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQK----------------------LKGIITEGD 271
               P+     +++    G V +V + ++                        GI+T  D
Sbjct: 185 PPTAPVQKLAQLMATHGVGYVVIVRQREQGTGETVTDLDFSSVLSFRQFPIPMGIVTADD 244

Query: 272 IFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           I +      D   L  + VM      I  D  L  A Q ++Q +   L+V+ +  +  G+
Sbjct: 245 IVQFQTLPLDFQQLDAQTVMSSAWFSIRADDFLGTAYQRMQQWHTQQLIVLGNQGEWQGM 304

Query: 330 VHFLDLLRF 338
           +    LLR 
Sbjct: 305 IDQDSLLRA 313


>gi|83590524|ref|YP_430533.1| glycine betaine/L-proline transport ATP binding subunit [Moorella
           thermoacetica ATCC 39073]
 gi|83573438|gb|ABC19990.1| glycine betaine/L-proline transport ATP binding subunit [Moorella
           thermoacetica ATCC 39073]
          Length = 376

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 49/113 (43%), Gaps = 3/113 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    + + +  +  K+   + V DE  +L G ++  ++ RN+ +      V
Sbjct: 255 MIGEPVTVRPHTGVAEGVATMRRKKVDTLLVTDESGRLLGAVSIEELNRNYQR---AHQV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M ++  V+ E T    A  L+ +  +  L V+D   +  G+V    ++  
Sbjct: 312 QDLMARDVPVVFEGTPAREAFDLITRERLEYLPVIDKEGRLKGLVTRTSMVNA 364



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 41/181 (22%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCP-----------LID 241
           LLE      +D+   +P    G        +       PL+ +  P           L +
Sbjct: 118 LLELVGMDPDDYADRYPSELSGGQQQRIGVLRALAAEPPLILMDEPFGALDPITRENLQE 177

Query: 242 AITILSEKRFGCV----------------AVVDEGQKLKGIITEGDIFRN---------- 275
            +  L  K    +                 VV +   +  +    ++ R+          
Sbjct: 178 ELKALQAKLHKTILFVTHDMDEALKIADRIVVMKDGYIVQVAAPEELLRHPANEFVASFI 237

Query: 276 ----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                   L   +VE VMI  P  +   T +   +  +R+  +  L+V D+  + +G V 
Sbjct: 238 GKERLAPGLELRTVEQVMIGEPVTVRPHTGVAEGVATMRRKKVDTLLVTDESGRLLGAVS 297

Query: 332 F 332
            
Sbjct: 298 I 298


>gi|28210130|ref|NP_781074.1| glycine/betaine transport ATP-binding protein [Clostridium tetani
           E88]
 gi|28202566|gb|AAO35011.1| glycine/betaine transport ATP-binding protein [Clostridium tetani
           E88]
          Length = 368

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 51/94 (54%), Gaps = 3/94 (3%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVIL 297
            ++ ++ I+ +     + VVD+   LKGI+T   +      ++N   ++DVM  + K + 
Sbjct: 266 TIVQSVNIMKQNHVDSILVVDKDNILKGIVT---LKHLDLDNVNGKKLKDVMASDLKYVE 322

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  +   ++++++++IS + VVD  +K  G++ 
Sbjct: 323 LEDSIMDVIKVMKENSISYIPVVDKDKKLKGLIT 356



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ED+MIKNP     +  +  ++ +++Q+++  ++VVD      GIV    L
Sbjct: 249 TAEDIMIKNPIKTFGERTIVQSVNIMKQNHVDSILVVDKDNILKGIVTLKHL 300



 Score = 39.1 bits (90), Expect = 0.98,   Method: Composition-based stats.
 Identities = 15/46 (32%), Positives = 27/46 (58%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V++   ++D I ++ E     + VVD+ +KLKG+IT+  +   F K
Sbjct: 321 VELEDSIMDVIKVMKENSISYIPVVDKDKKLKGLITQSSLITTFSK 366


>gi|310792316|gb|EFQ27843.1| inosine-5'-monophosphate dehydrogenase [Glomerella graminicola
           M1.001]
          Length = 539

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 37/187 (19%), Positives = 63/187 (33%), Gaps = 17/187 (9%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + +VL  P           P  S+ M       +AIA+            V+H       
Sbjct: 62  SAVVLDSPVTKRITL--KTPFVSSPMDTVTEHEMAIAIALQGGLG-----VIHHNCSPQE 114

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G+   KL GI+T
Sbjct: 115 QADMVRKVKRYENGFILDPVVISRDTTVGEAKALKEKWGFGGFPVTESGKLGSKLLGIVT 174

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F +D N   +  VM+ +         L  A ++L +     L +VD     + 
Sbjct: 175 NRDI--QFEEDPNQ-PISKVMVTDLITAPSGIDLPEANKILAKSKKGKLPIVDKDSNLVS 231

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 232 MISRSDL 238


>gi|309789845|ref|ZP_07684424.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
 gi|308228149|gb|EFO81798.1| CBS domain-containing protein [Oscillochloris trichoides DG6]
          Length = 623

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 22/144 (15%), Positives = 52/144 (36%), Gaps = 13/144 (9%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV-------A 255
           +F V                       +  +     + +A  ++S++   C+        
Sbjct: 135 EFAVRSRRDSAAPTLFQTHLRDLVERDLVAISPDATVQEAAQLMSQEHVSCLLIDLPPYG 194

Query: 256 VVDEGQKLKGIITEGDIF-RNFHKDL-NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           V+D+     GI T+ D+  R     +     V  VM    + +  D+L+   +  + ++ 
Sbjct: 195 VLDQD---TGIFTDRDLRTRVVAAGIPYNTPVSKVMTTPIRTLPADSLVFEGLMAMLENR 251

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLR 337
              + +  +  + +GIV  + +LR
Sbjct: 252 QHHMPIT-EHGRIVGIVTHMAILR 274


>gi|330834627|ref|YP_004409355.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
 gi|329566766|gb|AEB94871.1| signal-transduction protein [Metallosphaera cuprina Ar-4]
          Length = 238

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 3/107 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK 291
           +V     L  A  I++ K  G + V  EG+++ GI+TE D+ RN   D  ++ V DVM  
Sbjct: 70  MVSKDIDLRQASKIMTGKGVGSLLVT-EGERVIGIVTERDLIRNIKVD-ESVKVGDVMKV 127

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +P V   +T +    + +R++     +VV +     G++   D+   
Sbjct: 128 DPVVASLETSILEIAKAMRENWERHAIVV-ENNLPAGVISIRDVANA 173



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 7/105 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     +   + I+ E     + V      + GI+T  D+   + +      VE+VM  +
Sbjct: 14  VDGQVSITYGMKIMLEHGIRRLIV----GDIDGIVTIRDLVYGWLQGAKL--VEEVMTSD 67

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             ++ +D  L  A +++    +  L+V  + ++ IGIV   DL+R
Sbjct: 68  LLMVSKDIDLRQASKIMTGKGVGSLLVT-EGERVIGIVTERDLIR 111



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 43/111 (38%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +  +   +++    + E       VV E     G+I+  D+      +      
Sbjct: 125 MKVDPVVASLETSILEIAKAMRENWERHAIVV-ENNLPAGVISIRDVANAILTERYNHKS 183

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++M      +  D+ L  A  ++ + N+ ++ VVD  +  +G V   D+L
Sbjct: 184 QEIMKSPVFRVTPDSTLETARTIMAKENLGLIPVVD-ARALLGSVEERDIL 233



 Score = 43.0 bits (100), Expect = 0.071,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 27/54 (50%), Gaps = 4/54 (7%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V +VM ++   +     +T  M+++ +H I  L+V D      GIV   DL+
Sbjct: 1   MKVSEVMTRDLVAVDGQVSITYGMKIMLEHGIRRLIVGDID----GIVTIRDLV 50


>gi|229828703|ref|ZP_04454772.1| hypothetical protein GCWU000342_00769 [Shuttleworthia satelles DSM
           14600]
 gi|229793297|gb|EEP29411.1| hypothetical protein GCWU000342_00769 [Shuttleworthia satelles DSM
           14600]
          Length = 280

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 63/171 (36%), Gaps = 6/171 (3%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            + + +    ++     L  E   +   AV  +   + +++  G+G S     +  +   
Sbjct: 97  QQVLKSHLEAINETNQLLDKE---KVDQAVRMLTEAR-QIMFFGVGDSKTAAIEANNKFL 152

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
                               M+T +DL+ V+S+SGS+ +   +   A+     +I+IT  
Sbjct: 153 HVTPKVMCAGDTHLQAMAASMMTEEDLLFVVSYSGSTKDTVEVAQIAKEAGAKVISITRF 212

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            KS +   +D VL    +      G     + + QL I D L     ++  
Sbjct: 213 LKSPLTEFSDCVLICGSKEGPLEGG--SMGAKLSQLHIIDILYQCYFKANG 261


>gi|291295220|ref|YP_003506618.1| CBS domain-containing protein [Meiothermus ruber DSM 1279]
 gi|290470179|gb|ADD27598.1| CBS domain containing protein [Meiothermus ruber DSM 1279]
          Length = 211

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 8/112 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------FHKDLNTLSVE 286
           V +   L  A  ++ ++    + V  E  +L G+IT+ DI                  V 
Sbjct: 14  VDVAVTLEAAYHLMLQRNIRHIPVTQE-GRLVGMITDRDIRLATSPFATGGAQPTDTPVG 72

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VM +          +  A +++RQ  I  L ++ + +  +GIV  +DLL  
Sbjct: 73  QVMAQPVITGDPLDPVEEAARVMRQRKIGALPIL-EGEALVGIVTGIDLLDA 123



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V+DVM      +     L  A  L+ Q NI  + V     + +G++   D+
Sbjct: 3   VKDVMNSPVLTVDVAVTLEAAYHLMLQRNIRHIPVT-QEGRLVGMITDRDI 52


>gi|298528222|ref|ZP_07015626.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511874|gb|EFI35776.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 636

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 48/106 (45%), Gaps = 2/106 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
                 + +A  ++ +++   V  ++   +  G++T+ D+              V+++  
Sbjct: 176 CSEYASIKEAAALMRDQKKSAVVTMNALDQSIGLLTDNDLRSKVVSQNYPVHNPVKEIAS 235

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +    + ED+ +  A+ ++ +H++  L++ DD    +GI    DLL
Sbjct: 236 RPLITLPEDSQVFEAIIMMMKHSVKHLVITDDRDNVLGIATEQDLL 281


>gi|167903015|ref|ZP_02490220.1| SIS domain protein [Burkholderia pseudomallei NCTC 13177]
          Length = 264

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A + I A + GL  L + L      QF  AV  ++  +  + + G+ +S  + S +   L
Sbjct: 88  ARQFIDASRAGLDELAAGLD---DDQFDAAVTMLERAEN-IYVVGVRRSFPVASYIVYAL 143

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  AR    
Sbjct: 144 QHTAKR------VHLVSGLGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRAARHNHA 197

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + +T    S +A  A   L +         G A    +    + +  AL IAL     
Sbjct: 198 QTLVVTDSRLSPLARDASAHLLV-------KEGSAFAFRSLTSTICLCQALFIALAYRLE 250

Query: 199 FSEND 203
            +  +
Sbjct: 251 LNVEE 255


>gi|21674854|ref|NP_662919.1| CBS domain-containing protein [Chlorobium tepidum TLS]
 gi|21648076|gb|AAM73261.1| CBS domain protein [Chlorobium tepidum TLS]
          Length = 148

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRN-------FH 277
                  +K    + +A+ ++ +     + V         GI+TE DI           H
Sbjct: 16  MQKDYHTIKGSSTVAEALQLMKKTGESGLVVEPRNEDDCYGIVTEKDILEKVIDPGEDLH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    I     +  A++L+++ N+  L V+ +  K IG+++  D+L 
Sbjct: 76  RDPWNTPVFQIMSKPIISINPSMRIKYALRLMKRTNVRRLTVM-EGNKVIGVLNMTDVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135


>gi|257877469|ref|ZP_05657122.1| sugar isomerase [Enterococcus casseliflavus EC20]
 gi|257811635|gb|EEV40455.1| sugar isomerase [Enterococcus casseliflavus EC20]
          Length = 189

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 12/183 (6%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
             E++ L  + +++      +    +E I   K RV   G+G+   I   +A   A  G 
Sbjct: 9   ENEEKILEEISATMNKISEEEIVLLLEAIFQSK-RVFFIGVGRVLLILEAIAKRWAHLGI 67

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            +  V            IT+DDL+IV S SG S    AI   A+ F   +  I +   S 
Sbjct: 68  DTVIVGEITEP-----AITKDDLLIVGSGSGESLIPLAITKKAKSFEAKIAHIGANGNSS 122

Query: 152 VACHADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFY 205
           ++ +AD  + +P + +         + P TS   Q+   +GD L++ ++       +  +
Sbjct: 123 ISQYADFFIQIPVQTKFTKENETASVQPMTSLFEQVLLILGDTLSLLIINRNKIDLHTLW 182

Query: 206 VLH 208
             H
Sbjct: 183 EYH 185


>gi|87121679|ref|ZP_01077566.1| CBS domain protein [Marinomonas sp. MED121]
 gi|86162930|gb|EAQ64208.1| CBS domain protein [Marinomonas sp. MED121]
          Length = 148

 Score = 67.6 bits (164), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 13/116 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNT 282
               L DA  I+ +K    + ++D+  K  G++T+ +  ++              K    
Sbjct: 23  ETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLKHAFYLVSQFGTGMLSKKEMQ 82

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             V   M  +   I +DT L  A +   ++    L VVD   + +GI+  +D ++ 
Sbjct: 83  TPVSKAMNTDMLTIEQDTHLDTAAEFFVENKYGCLPVVD-QGRLVGILTPIDFVKL 137



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 30/55 (54%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V D+M+ N   + E   L  A ++++  NI  L ++DD  K IG++   + L+
Sbjct: 8   QTVSDLMVTNLVTLAETASLADAKKIMQDKNIRNLPIIDDDGKCIGMLTQREYLK 62



 Score = 37.2 bits (85), Expect = 3.9,   Method: Composition-based stats.
 Identities = 20/90 (22%), Positives = 36/90 (40%), Gaps = 3/90 (3%)

Query: 187 DALAIALLESRNFSENDFYVLHPGGKLG--TLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
           D   I +L  R + ++ FY++   G        +           +  ++    L  A  
Sbjct: 48  DGKCIGMLTQREYLKHAFYLVSQFGTGMLSKKEMQTPVSKAMNTDMLTIEQDTHLDTAAE 107

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              E ++GC+ VVD   +L GI+T  D  +
Sbjct: 108 FFVENKYGCLPVVD-QGRLVGILTPIDFVK 136


>gi|291287031|ref|YP_003503847.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Denitrovibrio acetiphilus DSM
           12809]
 gi|290884191|gb|ADD67891.1| putative CBS domain and cyclic nucleotide- regulated
           nucleotidyltransferase [Denitrovibrio acetiphilus DSM
           12809]
          Length = 628

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/132 (16%), Positives = 52/132 (39%), Gaps = 7/132 (5%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P       +      M +      +     + DA  +++E + G + V D+  +L G++T
Sbjct: 146 PANLTENTYKSVGGCMVTPIFT--INTDESIFDASAMMAEHKIGSLVVTDDDGRLAGLLT 203

Query: 269 EGDIFRNFHKDLNT----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
              +   +  + +     + V   M  +P  +  +  +  A+  L++      +VV    
Sbjct: 204 SKQLVHKYMANPDRENMAVDVLKYMNVDPVAMPPEFPIVEAIAELQEQGEDYAVVV-KSD 262

Query: 325 KAIGIVHFLDLL 336
           K +G++   DL+
Sbjct: 263 KPVGLISNKDLM 274


>gi|153939881|ref|YP_001391785.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum F str. Langeland]
 gi|170755303|ref|YP_001782032.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum B1 str. Okra]
 gi|152935777|gb|ABS41275.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum F str. Langeland]
 gi|169120515|gb|ACA44351.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum B1 str. Okra]
 gi|295319811|gb|ADG00189.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum F str. 230613]
          Length = 584

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++  ++      +
Sbjct: 15  MKTDFIKVFKNEAISSAFNKMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENQGKKFNDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E+ + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LENYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNRKIIGIVHLDDL 124


>gi|262190544|ref|ZP_06048787.1| helix-turn-helix protein RpiR [Vibrio cholerae CT 5369-93]
 gi|262033584|gb|EEY52079.1| helix-turn-helix protein RpiR [Vibrio cholerae CT 5369-93]
          Length = 281

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/157 (20%), Positives = 68/157 (43%), Gaps = 3/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S++E S+    +       +++     ++ + GIG S  + + +   L   G    F  
Sbjct: 108 VSTIEQSIGLMDAESVEQCAQQLLKA-NKIALAGIGASAIVAADINHKLIRAGFNVQFNQ 166

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++  DD+++V+S  G++ E+   +  A++    +IA+T   +  VA  AD
Sbjct: 167 DYHIQIVQASLLKADDVLLVVSARGNTQEVLTAIERAQQNGAQVIALTRYGRDKVAQLAD 226

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            V+      E    G+   T  ++Q+A  D +   L+
Sbjct: 227 YVIPYSYTEEHSQLGMV--TPQLLQMAAFDIVFFKLI 261


>gi|126726337|ref|ZP_01742178.1| Protein containing a CBS domain [Rhodobacterales bacterium
           HTCC2150]
 gi|126704200|gb|EBA03292.1| Protein containing a CBS domain [Rhodobacterales bacterium
           HTCC2150]
          Length = 144

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL- 283
                I  VK    +  A++ LS ++ G + V D+G+ L GI++E DI R   K      
Sbjct: 10  KPHQEIYSVKKSSSIDAAVSELSNRKVGALIVSDDGKTLDGILSERDIIREMGKRGTACL 69

Query: 284 --SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +V D+M        +       ++ + +     + ++D   K IG++   D+++  +
Sbjct: 70  GDNVGDLMTGTVSCCAKSDTADKVLETMTEGRFRHMPILD-GGKIIGLISIGDVVKARL 127


>gi|110680185|ref|YP_683192.1| CBS domain-containing protein [Roseobacter denitrificans OCh 114]
 gi|109456301|gb|ABG32506.1| CBS domain protein [Roseobacter denitrificans OCh 114]
          Length = 144

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/121 (18%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDL 280
                 +  V     + +A  ILS+K  G V V  +G+ + GI++E DI R         
Sbjct: 9   TKQQHDVVTVPPTMNISEAARILSDKGIGTVVVSSDGKAVDGILSERDIVREIGARGAGC 68

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + +V  +M         +      ++ + +     + VV++     G++   D+++  +
Sbjct: 69  LSHTVASLMTSKIVTCKSNDEADAILKQMTEGRFRHMPVVEE-GALQGLISLGDVVKARL 127

Query: 341 I 341
           +
Sbjct: 128 M 128


>gi|88808652|ref|ZP_01124162.1| CBS domain protein [Synechococcus sp. WH 7805]
 gi|88787640|gb|EAR18797.1| CBS domain protein [Synechococcus sp. WH 7805]
          Length = 156

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 57/133 (42%), Gaps = 27/133 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    PL DA+T+LS+     V VV +   L G +TE ++                    
Sbjct: 18  VTPATPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRESGVDAGPYVMLLDSVI 77

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                 N+ K ++ +   +V D+M ++     +   L  A  +L +     L+VVD+ ++
Sbjct: 78  YLRNPLNWDKQVHQVLGNTVADLMSRDSHCCAQSLPLPKAASMLHEKGTQRLIVVDEERR 137

Query: 326 AIGIVHFLDLLRF 338
            +G++   D++R 
Sbjct: 138 PVGMLTRGDVVRA 150



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 27/57 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +V +VM      +   T L  A+ LL  H+IS + VV D    +G +   +L+
Sbjct: 2   VLQQTVGEVMSAPVLTVTPATPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLM 58



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 23/52 (44%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                       PL  A ++L EK    + VVDE ++  G++T GD+ R   
Sbjct: 101 MSRDSHCCAQSLPLPKAASMLHEKGTQRLIVVDEERRPVGMLTRGDVVRALA 152


>gi|229062351|ref|ZP_04199668.1| Acetoin utilization protein AcuB [Bacillus cereus AH603]
 gi|228716920|gb|EEL68606.1| Acetoin utilization protein AcuB [Bacillus cereus AH603]
          Length = 214

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPDDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  D  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPDDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|78357121|ref|YP_388570.1| hypothetical protein Dde_2078 [Desulfovibrio desulfuricans subsp.
           desulfuricans str. G20]
 gi|78219526|gb|ABB38875.1| CBS protein [Desulfovibrio desulfuricans subsp. desulfuricans str.
           G20]
          Length = 142

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/116 (21%), Positives = 45/116 (38%), Gaps = 13/116 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT------------ 282
               L  A +++   R   + +VDE  +  G++T  DI                      
Sbjct: 17  ETDTLKTARSLMQLARIRHIPIVDEHGRFIGLLTHRDILEATISRFAEVENSVQDEIDSG 76

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M  + + +  D  L  A ++L +H    L VV +    +GIV   D L+ 
Sbjct: 77  IPVSEIMRTDVRRVPPDMRLRDAAEMLFRHKYGCLPVV-ESGILVGIVTEADFLKL 131



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+V D+M      +LE   L  A  L++   I  + +VD+  + IG++   D+L  
Sbjct: 2   LNVGDLMTTELFTLLETDTLKTARSLMQLARIRHIPIVDEHGRFIGLLTHRDILEA 57



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               +  V     L DA  +L   ++GC+ VV E   L GI+TE D  +
Sbjct: 83  MRTDVRRVPPDMRLRDAAEMLFRHKYGCLPVV-ESGILVGIVTEADFLK 130


>gi|329766201|ref|ZP_08257759.1| signal-transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
 gi|329137260|gb|EGG41538.1| signal-transduction protein [Candidatus Nitrosoarchaeum limnia
           SFB1]
          Length = 153

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           V     + +A  ++ + R G V V+ E     GI+T+ D       H    T  V+ +M 
Sbjct: 20  VDSSLTVNEAAKLMEDARVGAVIVM-ENNSAIGIVTDRDFAVKIVAHAYHITTPVKQIMS 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                I  D  + +   L+    I  L V++D Q  IGI+   DL+
Sbjct: 79  SPLLAIGPDESVWMVADLMYTRGIRKLPVIEDDQ-VIGIITATDLV 123



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           D + ++V DVM K+   +     +  A +L+    +  ++V+ +   AIGIV   D
Sbjct: 3   DADKITVRDVMTKSVIAVDSSLTVNEAAKLMEDARVGAVIVM-ENNSAIGIVTDRD 57


>gi|300710145|ref|YP_003735959.1| CBS domain containing membrane protein [Halalkalicoccus jeotgali
           B3]
 gi|299123828|gb|ADJ14167.1| CBS domain containing membrane protein [Halalkalicoccus jeotgali
           B3]
          Length = 380

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 1/97 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           + +    L E       V D    L GI+T   I  +  ++L+ ++VE +       +  
Sbjct: 79  IREVARKLVEGGTMVAPVFDGEG-LWGIVTADAILESVLENLDAITVEQIYTDEVVSVNR 137

Query: 299 DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DT +  A+ LLR+H IS L V+ D  +  G+V   DL
Sbjct: 138 DTTVGRAINLLREHGISRLPVLADDGQLEGVVTTHDL 174



 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 50/123 (40%), Gaps = 17/123 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE------ 286
           V     +  AI +L E     + V+ +  +L+G++T  D+     +D++  +V       
Sbjct: 135 VNRDTTVGRAINLLREHGISRLPVLADDGQLEGVVTTHDLRDVIIRDMDKATVGDRAGDL 194

Query: 287 ---------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDL 335
                    DVM    +    +     A++ +   + + LMV   ++ +   G+V   D+
Sbjct: 195 ERILDIPVYDVMNSPVETADREETAKAAVERMLDSDYNGLMVTADENDRHVSGVVTKTDV 254

Query: 336 LRF 338
           LR 
Sbjct: 255 LRA 257


>gi|288919132|ref|ZP_06413471.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
 gi|288349476|gb|EFC83714.1| putative signal transduction protein with CBS domains [Frankia sp.
           EUN1f]
          Length = 128

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVM 289
           ++     L  A  +++ ++ G   V+D   +  GI+TE D+ R     +D +   V D +
Sbjct: 13  VIGPNHTLRQAARLMAARQVGAAVVLDSESQGFGILTERDVLRSVALGQDPDVELVGDHV 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++  V   D  L  A   + +     L+V    +   G++   D++R
Sbjct: 73  TRDVVVAGPDWSLDEAAAAMLRGGFRHLIVTSGAE-VEGVLSMRDVVR 119



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V D M     VI  +  L  A +L+    +   +V+D   +  GI+   D+LR
Sbjct: 1   MRVSDGMSVLVLVIGPNHTLRQAARLMAARQVGAAVVLDSESQGFGILTERDVLR 55


>gi|94969977|ref|YP_592025.1| Cl- channel, voltage gated [Candidatus Koribacter versatilis
           Ellin345]
 gi|94552027|gb|ABF41951.1| Cl- channel, voltage gated [Candidatus Koribacter versatilis
           Ellin345]
          Length = 613

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNFH-KD 279
                P V     + +    L++      R   V +VD+  KLKG+IT GD+ R    +D
Sbjct: 461 MVTEPPRVPETMLVREMAERLAQHDPILSRHQGVLIVDDAGKLKGLITRGDLLRAMESED 520

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDLLR 337
             T +V      +     ED LL  A   + +  +  L VVD     K +G      L R
Sbjct: 521 AGTQTVLQAGTTSLLTAYEDELLFHAASRMLRAGVGRLPVVDRKDPTKILGY-----LGR 575

Query: 338 FGII 341
            G++
Sbjct: 576 AGVL 579


>gi|91793434|ref|YP_563085.1| DNA-binding transcriptional regulator HexR [Shewanella
           denitrificans OS217]
 gi|91715436|gb|ABE55362.1| transcriptional regulator, RpiR family [Shewanella denitrificans
           OS217]
          Length = 286

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 62/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   H AV+ +   K  +   G+G S  +     +       P    
Sbjct: 104 SMASLDTARQSLDTAAIHKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 162

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +IAIT+   S ++   
Sbjct: 163 DDVLMQRMSCINCNEGDVVVLISHTGRTKSLIEIARIARENGAAVIAITAR-NSPLSLEC 221

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL   D LA      R 
Sbjct: 222 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRG 261


>gi|2935660|gb|AAC38310.1| HexR [Pseudomonas aeruginosa PAO1]
          Length = 285

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 58/145 (40%), Gaps = 4/145 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
             AV+ +   + ++   G+G S  +                             +    D
Sbjct: 120 DRAVDLLIQAR-QIHFFGLGASASVALDAQHKFFRFNLAVSAQADVLMQRMIASVAHTGD 178

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           L +V+S++G + EL  + + AR     ++ +T+   S +A  + + L +P   ++  +  
Sbjct: 179 LFVVISYTGRTRELVEVAHLARENGASVLGLTA-AGSPLARASTLCLDIPLPEDTDIY-- 235

Query: 174 APTTSAIMQLAIGDALAIALLESRN 198
            P TS I+QL + D LA  +   R 
Sbjct: 236 MPMTSRIVQLTVLDVLATGVTLRRG 260


>gi|289423520|ref|ZP_06425321.1| inosine-5'-monophosphate dehydrogenase [Peptostreptococcus
           anaerobius 653-L]
 gi|289156022|gb|EFD04686.1| inosine-5'-monophosphate dehydrogenase [Peptostreptococcus
           anaerobius 653-L]
          Length = 499

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 68/185 (36%), Gaps = 17/185 (9%)

Query: 155 HADIVLTLPKEPESCPHGLA-----PTTSAIMQLAIGDALAIALLESRN--FSENDFYVL 207
            A++ L  P          A     P  SA+MQ    D +A+AL +     F      + 
Sbjct: 28  PANVSLVTPVVKFKKGEEPALKMNIPLVSAVMQSVSDDNMAVALAKEGGISFIYGSQTIE 87

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
           +    +  +    +  + S  ++        L D + +  +     VA+ D+G    KL 
Sbjct: 88  NQAAMVAKVKSHKAGFVISDSNLT---PDHTLADILDLKEKTGHSTVAITDDGTAKGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDD 322
           GI+   D      +      V D M    K++  D    L  A  ++  + ++ L V+D+
Sbjct: 145 GIVASRDYR--VSRMSRDTKVRDFMTPIEKIVYADKNVTLKEANNIIWDNKLNSLPVLDE 202

Query: 323 CQKAI 327
             K +
Sbjct: 203 DGKLV 207


>gi|258620128|ref|ZP_05715167.1| conserved hypothetical protein [Vibrio mimicus VM573]
 gi|258587486|gb|EEW12196.1| conserved hypothetical protein [Vibrio mimicus VM573]
          Length = 281

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 72/174 (41%), Gaps = 11/174 (6%)

Query: 22  STVQCALRS-IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
             ++ A    +   ++ +  +++ L  + + Q   A         ++ + GIG S  + +
Sbjct: 98  QIIEKAKHLFVSTIEQSIGLIDAELVEQCAQQLLKA--------NKIALAGIGASAIVAA 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
            +   L   G    F            ++  DD+++V+S  G++ E+   +  A++    
Sbjct: 150 DINHKLIRAGFNVQFNQDYHIQIVQASLLKSDDVLLVVSARGNTQEVLTAIERAKQNDAQ 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           +IA+T   +  VA  AD V+      E    G+   T  ++Q+A  D +   L+
Sbjct: 210 VIALTRYGRDKVAQLADYVIPYSYTEEHSQLGMV--TPQLLQMAAFDIVFFKLI 261


>gi|229026122|ref|ZP_04182497.1| Acetoin utilization protein AcuB [Bacillus cereus AH1272]
 gi|228735173|gb|EEL85793.1| Acetoin utilization protein AcuB [Bacillus cereus AH1272]
          Length = 208

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 9   HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 68

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 69  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 124



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 9/46 (19%), Positives = 21/46 (45%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 1   MNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 46


>gi|117619018|ref|YP_858041.1| CBS domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560425|gb|ABK37373.1| CBS domains protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 136

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 40/88 (45%), Gaps = 13/88 (14%)

Query: 265 GIITEGDIFRNFHKDLN------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           G+I++ D+FR     L+                  +M ++P  I     +   ++++ + 
Sbjct: 45  GVISDRDLFRAISPYLDSEAEMSRDTETLNRRAHQIMSRHPITIAPQLTVRDGVKMMLEK 104

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           N+S L V+ +    +GI+ + DLLR  +
Sbjct: 105 NVSCLPVL-ENGALVGIISWKDLLRAAL 131


>gi|238060692|ref|ZP_04605401.1| signal transduction protein [Micromonospora sp. ATCC 39149]
 gi|237882503|gb|EEP71331.1| signal transduction protein [Micromonospora sp. ATCC 39149]
          Length = 138

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/103 (21%), Positives = 43/103 (41%), Gaps = 5/103 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN--TLSVEDVMIKN 292
              L  A   + +   G   VV  G  + GI+T+ DI  R   + L+     +  +  ++
Sbjct: 18  DETLTAAAREMRDSAIG-DVVVTAGDDVVGIVTDRDITVRGVAEGLDPSKTPLNRITSRD 76

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + +      A  L+R + +  L V+D   + +G++   DL
Sbjct: 77  VITVSQYDDAVAAADLMRTYAVRRLPVID-GGRLVGLISIGDL 118



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +V + M      +  D  LT A + +R   I  ++V       +GIV   D+   G+
Sbjct: 2   TTVGEFMTTRLVTMDGDETLTAAAREMRDSAIGDVVVTAGDD-VVGIVTDRDITVRGV 58


>gi|71733975|ref|YP_272709.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|71554528|gb|AAZ33739.1| transcriptional regulator, RpiR family [Pseudomonas syringae pv.
           phaseolicola 1448A]
          Length = 286

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 41/166 (24%), Positives = 63/166 (37%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    +F  AV  +   +  +   G+G  S     +L + L   G P    H
Sbjct: 102 ATLHQHLAGFDESRFAAAVACLSDAR-MIHAFGMGGCSSLCSEELQTRLVRLGYPVAACH 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 161 DPVMMRMIAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 260


>gi|330971723|gb|EGH71789.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 221

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G  + +F  A+  +   +  +   G+G  S     +L + L   G P     
Sbjct: 37  ATLRQHLAGFDAKRFAAAIACVTDAR-MIHTFGMGGCSSLCSEELQTRLVRLGYPVAACR 95

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 96  DPVMMRMVAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 154

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L  S   S  D
Sbjct: 155 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELALS---SPED 195


>gi|313113533|ref|ZP_07799122.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium cf.
           prausnitzii KLE1255]
 gi|310624260|gb|EFQ07626.1| glutamine-fructose-6-phosphate transaminase [Faecalibacterium cf.
           prausnitzii KLE1255]
          Length = 611

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 9/137 (6%)

Query: 65  GRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           GRV + G G +   G +G     TLA    P+    A+E  + D  ++ ++DL+I++S S
Sbjct: 296 GRVHLVGCGTAMHAGMVGKSAIETLAR--VPAEVDIASEFRYRD-PILEKNDLVIIISQS 352

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + +  A L  A+   +P++AI +   S +A  AD V+     PE     +A T + ++
Sbjct: 353 GETSDTLAALKLAKSRGVPVLAIVNVVGSSIARAADYVMYTYAGPEIA---VASTKAYMV 409

Query: 182 QLAIGDALAIALLESRN 198
           Q+ +    A+ L  +R 
Sbjct: 410 QMCVLYLFALRLAYARG 426


>gi|294496136|ref|YP_003542629.1| hypothetical protein Mmah_1488 [Methanohalophilus mahii DSM 5219]
 gi|292667135|gb|ADE36984.1| CBS domain containing protein [Methanohalophilus mahii DSM 5219]
          Length = 285

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/96 (22%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + + IL +K+   V V+ +  ++ GI++      N   +     +  +M ++P  I  + 
Sbjct: 26  EVLNILKDKKVSGVPVL-KDNRVVGIVS----RSNLLSNPEEEQIALLMTRDPLKIKPED 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  A Q L ++    L VVDD  K  G++   D++
Sbjct: 81  NIKKAAQYLMEYGFRRLPVVDDDDKLEGMITVADIV 116



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 47/112 (41%), Gaps = 5/112 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +K    +  A   L E  F  + VVD+  KL+G+IT  DI  +         +   + + 
Sbjct: 76  IKPEDNIKKAAQYLMEYGFRRLPVVDDDDKLEGMITVADIVASMASLQLDDPISKYLGRK 135

Query: 293 PKVILE---DTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              I     +T L +  + +   +I  + +++     +GI+   D++   +I
Sbjct: 136 G--IGPVWCETPLPLVARNMELAHIKAVPILNSELDLVGIISDRDIISASVI 185



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 20/142 (14%), Positives = 46/142 (32%), Gaps = 36/142 (25%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---------------- 276
           V    PL      +       V +++    L GII++ DI                    
Sbjct: 140 VWCETPLPLVARNMELAHIKAVPILNSELDLVGIISDRDIISASVIEDSLEMSDMSAGSG 199

Query: 277 --------HKD------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                    +D            +  + V++VM+ +      +  ++     ++++ +  
Sbjct: 200 DDEWTWESMRDTLSIYYSVSRIKVPDVPVKEVMVTDLIKASSNMSVSECALKMKRNRVDQ 259

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + VVD     IG++    L++ 
Sbjct: 260 VPVVDANGTFIGLLRDRYLMKA 281


>gi|294892740|ref|XP_002774210.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
 gi|239879427|gb|EER06026.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
          Length = 652

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 10/156 (6%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEA 101
           L   +  +   A+E I +   R++I   G S H   IG  L   LA       +      
Sbjct: 314 LDVTIDGKDRTALETIASAS-RIIICACGTSWHSGLIGEYLIEQLARINVEVEYASE--- 369

Query: 102 SHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
                 ++T  D++IV+S SG + +    +  AR +    I I +   S +A   D  + 
Sbjct: 370 FRYRNPLLTPKDVVIVISQSGETADTLEAVRIAREYGATPIGIVNTVGSTIARDTDAGIY 429

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           L   PE    G+A T +   Q+ +   LA+ L   R
Sbjct: 430 LHAGPE---IGVASTKAFTSQVMVLTLLALRLAMCR 462


>gi|116753618|ref|YP_842736.1| CBS domain-containing protein [Methanosaeta thermophila PT]
 gi|116665069|gb|ABK14096.1| CBS domain containing membrane protein [Methanosaeta thermophila
           PT]
          Length = 262

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 48/113 (42%), Gaps = 13/113 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------HKDL 280
           V     LI A  ++ ++  G + V+D G KL GI+TE DI R                 +
Sbjct: 137 VSPRDRLIHARRMMMDRDIGRLPVLD-GGKLVGILTERDIARALRAFRDLVSWRQQETRI 195

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             L V DVM  + K +  DT L    +++ + N   L V++      G++   
Sbjct: 196 KNLLVSDVMTHDVKYVYVDTPLEEVRRIILEENRGGLPVLNSDGTLAGMITRR 248



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 43/106 (40%), Gaps = 8/106 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     + +AI +L +     V VV +  ++ G +      R    ++    V    +++
Sbjct: 81  VHPEMGVEEAILLLQKT---SVLVVTQNDEILGWVR----PREILANVKLTGVSKDAMRS 133

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              +     L  A +++   +I  L V+D   K +GI+   D+ R 
Sbjct: 134 ALTVSPRDRLIHARRMMMDRDIGRLPVLD-GGKLVGILTERDIARA 178



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+D+M   P  I +   L  A+ L+ +H    L+V  +  K  GI+    + R
Sbjct: 1   MQVKDIMTP-PITIDKSERLGHALDLMEKHGTRRLLVT-NNGKLGGIITMRQIAR 53



 Score = 39.1 bits (90), Expect = 1.0,   Method: Composition-based stats.
 Identities = 20/113 (17%), Positives = 41/113 (36%), Gaps = 10/113 (8%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRN 275
            V         +     L  A+ ++ +     + V +   KL GIIT   I       R 
Sbjct: 2   QVKDIMTPPITIDKSERLGHALDLMEKHGTRRLLVTN-NGKLGGIITMRQIARVLGTRRR 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                ++L V    +     +  +  +  A+ LL++   + ++VV    + +G
Sbjct: 61  LGMPASSLHVAAATLDAVIPVHPEMGVEEAILLLQK---TSVLVVTQNDEILG 110


>gi|302559994|ref|ZP_07312336.1| transcriptional regulator [Streptomyces griseoflavus Tu4000]
 gi|302477612|gb|EFL40705.1| transcriptional regulator [Streptomyces griseoflavus Tu4000]
          Length = 314

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/131 (23%), Positives = 53/131 (40%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R  + G+G SG +   L   L   G  +        +  +   +   D+ I ++ SGS+ 
Sbjct: 158 RTDVYGVGASGLVAQDLTQKLLRIGLLAQAHSDPHLAVTNAVQLRAGDVAIAVTHSGSTG 217

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       +A+T    S V  +AD +LT     ES     A  +S   QL +
Sbjct: 218 DVIEPLRVAFERGATTVAVTGRPDSPVTQYADHILTTSTARESE-LRPAAMSSRTGQLLV 276

Query: 186 GDALAIALLES 196
            D L + + + 
Sbjct: 277 VDCLFVGVAQR 287


>gi|88604259|ref|YP_504437.1| sugar isomerase (SIS) [Methanospirillum hungatei JF-1]
 gi|88189721|gb|ABD42718.1| 3-hexulose-6-phosphate isomerase [Methanospirillum hungatei JF-1]
          Length = 194

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/136 (23%), Positives = 51/136 (37%), Gaps = 9/136 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  +  +L+ +    F  A         R+ + G G+SG +    A  L   G  S+ V 
Sbjct: 8   IGEIAETLRQDQVDCFISA----LMSADRIFVIGAGRSGFVAKSFAMRLMHLGLTSYVVG 63

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                        ++D +I  S SG +  +       R+    +  IT    S +A  AD
Sbjct: 64  ETVTP-----SFHKNDTLIAFSGSGKTKSVMEACETTRQIGGQICLITGTRVSPMAELAD 118

Query: 158 IVLTLPKEPESCPHGL 173
            V+ L  E ESC  G 
Sbjct: 119 CVVLLDTEEESCHVGP 134


>gi|332363679|gb|EGJ41459.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis SK49]
          Length = 283

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/185 (16%), Positives = 61/185 (32%), Gaps = 4/185 (2%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
             +    +  +  +    V +I     RV   G G SG +   +       G     +  
Sbjct: 100 DQIHQQTKELIDEEKLERVAQIIEEADRVYFFGTGSSGLVARDMKLRFMRLGVVCEALTD 159

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
            +       ++ ++ L+I  S SG +  +   L  A+      I +T + + +     D 
Sbjct: 160 QDGFAWTTSILDKNCLVIGFSLSGQTQSIIDSLIDAKNMGAKTILVTGQPEKI---QEDF 216

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLF 217
              +P   +S P  +   ++    L + D + A  L  +R   E  F       KL   +
Sbjct: 217 TEVVPVALQSKPEFILRISAQFPMLLMIDLIYAFFLEINREKKERIFNSYWENQKLNGYY 276

Query: 218 VCASD 222
                
Sbjct: 277 RRNIH 281


>gi|225405759|ref|ZP_03760948.1| hypothetical protein CLOSTASPAR_04980 [Clostridium asparagiforme
           DSM 15981]
 gi|225042714|gb|EEG52960.1| hypothetical protein CLOSTASPAR_04980 [Clostridium asparagiforme
           DSM 15981]
          Length = 285

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/157 (19%), Positives = 63/157 (40%), Gaps = 3/157 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++++  +L+         AV+ +   + RV   G G S  +  +  +  ++  +    + 
Sbjct: 109 VTAMSETLELMNPESTAKAVDLLSGAR-RVFCFGQGGSNVMAMEAWARFSTASSQFLHIE 167

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +        +    D+I+  S+SGS+ ++  +L  A+     +I IT  + S  A  +D
Sbjct: 168 DSHMQAMAAALCDEQDVILFFSYSGSTRDMLDVLRPAKNGGAKIILITHFSNSPAAALSD 227

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           ++L         P       + I Q+ I D L  A  
Sbjct: 228 VILLCG--SNESPLQSGSIAAKIGQMFIIDYLFYAYC 262


>gi|183599015|ref|ZP_02960508.1| hypothetical protein PROSTU_02459 [Providencia stuartii ATCC 25827]
 gi|188021230|gb|EDU59270.1| hypothetical protein PROSTU_02459 [Providencia stuartii ATCC 25827]
          Length = 281

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL +++ +L        + AV+ +   + ++   G G S  +     +    
Sbjct: 97  KIFESAMAGLDNVKHTLD---IAAVNRAVDLLTQAR-KISFFGFGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +              T  D+I+++S +G +  L  +   AR     +IAITSE 
Sbjct: 153 FNIPVIYFDDIVMQRMSCINSTEGDVIVLISHTGRTKALVDMARLARDNDATVIAITSE- 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            S ++  A + + +    ++  +   P  S + QL + D L       R     D
Sbjct: 212 NSPLSQVATLSIIIDVPEDTDVY--MPMVSRLAQLTVIDVLTTGFTLRRGEKFRD 264


>gi|167036385|ref|YP_001671616.1| RpiR family transcriptional regulator [Pseudomonas putida GB-1]
 gi|166862873|gb|ABZ01281.1| transcriptional regulator, RpiR family [Pseudomonas putida GB-1]
          Length = 288

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L          AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREHLDP---HALQQAVSAMAQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAVCISQSGRSKDLLITANLVRESGAN 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|169855094|ref|XP_001834217.1| IMP dehydrogenase [Coprinopsis cinerea okayama7#130]
 gi|116504725|gb|EAU87620.1| IMP dehydrogenase [Coprinopsis cinerea okayama7#130]
          Length = 549

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/169 (18%), Positives = 60/169 (35%), Gaps = 10/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +A+A+           +   P      +        +   + P+
Sbjct: 76  KTPFMSSPMDTVTEGNMAVAMALLGGIG--VIHHNQPPEAQAAMVRAVKRHENGFITDPV 133

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V      + D + I +   F  + + D G    KL GI+T  D+           S+ +V
Sbjct: 134 VLSPTHKVEDVLDIKARLGFCGIPITDTGVLGGKLVGIVTARDV----QFRDPATSLSEV 189

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M  +     +   L+ A  +LR      L ++D   + + ++   DLL+
Sbjct: 190 MTTDLVTAPQGVTLSEANDILRDSKKGKLPIIDTQGRLVSLLARSDLLK 238


>gi|124265510|ref|YP_001019514.1| CBS domain-containing protein [Methylibium petroleiphilum PM1]
 gi|124258285|gb|ABM93279.1| CBS domain protein [Methylibium petroleiphilum PM1]
          Length = 374

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 29/64 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             + +        D+M +    +   T L  A  LLR+H I  L VVD  ++ +GIV   
Sbjct: 221 EAYRRRFGATLCADIMTREVVTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLA 280

Query: 334 DLLR 337
           D LR
Sbjct: 281 DFLR 284



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 50/134 (37%), Gaps = 21/134 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  V  G  L DA  +L E R   + VVD  +++ GI+T  D  R+   D++    
Sbjct: 236 MTREVVTVSFGTELQDAWALLREHRIKALPVVDRARRVVGIVTLADFLRHADLDVHEGWS 295

Query: 283 ------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                               V  +M +  +V  ED  +   + L  Q     + +V    
Sbjct: 296 ARLRSFIRRTPATHSDKPEVVGQIMTRQVRVASEDRPVAELVPLFAQGGHHHIPIVGPEA 355

Query: 325 KAIGIVHFLDLLRF 338
           + +G++   D++  
Sbjct: 356 RLVGMLTQSDVVSA 369


>gi|328478413|gb|EGF48163.1| CBS domain-containing protein [Lactobacillus rhamnosus MTCC 5462]
          Length = 145

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R    D + TL    VM +
Sbjct: 28  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 87

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L V+        IG + 
Sbjct: 88  MPNVVTVTADTTIMAASKLLLKHNVDSLPVIQKHGDTHVIGKIT 131



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 25  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 70


>gi|312867813|ref|ZP_07728019.1| SIS domain protein [Streptococcus parasanguinis F0405]
 gi|311096876|gb|EFQ55114.1| SIS domain protein [Streptococcus parasanguinis F0405]
          Length = 252

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)

Query: 37  GLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +  L++S+Q E L  Q     + I   K +V+  G+G S  +    +   +  G  SF 
Sbjct: 90  AIQFLQTSVQDEALKKQLSEIADLIVQAK-QVIFLGVGTSLSLAEYGSYLFSGIGILSFA 148

Query: 96  VH----AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           +     + +  H +L     D L+I LS SG ++E+  ++   +  +  ++++T+ + S 
Sbjct: 149 ITNPFYSLKLHHSNL----EDVLVIALSVSGETEEVLTLVQGFKERNAKIVSLTNTDIST 204

Query: 152 VACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  +DI L+  +P             T+ I  +   ++L
Sbjct: 205 LSQLSDINLSYFMPVAYADSSLRSTNLTTQIPVVYFLESL 244


>gi|327399960|ref|YP_004340799.1| CBS domain-containing membrane protein [Archaeoglobus veneficus
           SNP6]
 gi|327315468|gb|AEA46084.1| CBS domain containing membrane protein [Archaeoglobus veneficus
           SNP6]
          Length = 274

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
            + +  +     V V+ +  +L GI+T  DI R   +D   L    +M  +P  +     
Sbjct: 18  VLELFKKYEISAVPVM-KNDELVGIVTRKDILRKIEEDQLAL----LMTPDPVTVQASDS 72

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +++L       L V+D  +K +GI+   D++
Sbjct: 73  INKVVEILSTTPFRRLPVLD-GKKLVGIITVRDII 106



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 1/105 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V+    +   + ILS   F  + V+D G+KL GIIT  DI     +    + V
Sbjct: 60  MTPDPVTVQASDSINKVVEILSTTPFRRLPVLD-GKKLVGIITVRDIIAKIAEMNIEMPV 118

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           +D +      + ++T L++  +++R  N  +  V+D     +G+V
Sbjct: 119 KDFVTPRVVCVWDETPLSIVGEVMRLSNSELCPVLDSSASVVGVV 163



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V++ M K    +   T ++   + + +++I  + V+D   + +G+VH  D+++
Sbjct: 213 LPKEPVKNFM-KKAVFVYPQTPVSKCAREMVRNDIDHMPVLDAENRLMGLVHDKDIIK 269



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 288 VMIKNPKVIL-EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M KN        T     ++L +++ IS + V+ + +  +GIV   D+LR 
Sbjct: 1   MMNKNVIYATLPGTR-ENVLELFKKYEISAVPVMKNDE-LVGIVTRKDILRK 50



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 10/56 (17%), Positives = 20/56 (35%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           V +       V    P+      +       + V+D   +L G++ + DI +   K
Sbjct: 218 VKNFMKKAVFVYPQTPVSKCAREMVRNDIDHMPVLDAENRLMGLVHDKDIIKVLLK 273


>gi|296876676|ref|ZP_06900724.1| transcription regulator [Streptococcus parasanguinis ATCC 15912]
 gi|296432178|gb|EFH17977.1| transcription regulator [Streptococcus parasanguinis ATCC 15912]
          Length = 250

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)

Query: 37  GLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +  L++S+Q E L  Q     + I   K +V+  G+G S  +    +   +  G  SF 
Sbjct: 88  AIQFLQTSVQDEALKKQLSEIADLIVQAK-QVIFLGVGTSLSLAEYGSYLFSGIGILSFA 146

Query: 96  VH----AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           +     + +  H +L     D L+I LS SG ++E+  ++   +  +  ++++T+ + S 
Sbjct: 147 ITNPFYSLKLHHSNL----EDVLVIALSVSGETEEVLTLVQGFKERNAKIVSLTNTDIST 202

Query: 152 VACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  +DI L+  +P             T+ I  +   ++L
Sbjct: 203 LSQLSDINLSYFMPVAYADSSLRSTNLTTQIPVVYFLESL 242


>gi|302533033|ref|ZP_07285375.1| signal-transduction protein [Streptomyces sp. C]
 gi|302441928|gb|EFL13744.1| signal-transduction protein [Streptomyces sp. C]
          Length = 137

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 43/108 (39%), Gaps = 4/108 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
                  V     ++DA   +++   G + +    Q+LKG++T+ DI        KD  T
Sbjct: 8   MTPDATCVGADDSILDAAKKMADLGVGALPICGSDQRLKGMLTDRDIVVKVLGAGKDPAT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +  +        I  D      ++ + +H +  L V+D     +GIV
Sbjct: 68  CTAGEFAQGEAVTIGADDDTAEILRTMTEHKVRRLPVID-GHTLVGIV 114



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 7/54 (12%), Positives = 22/54 (40%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  ++M  +   +  D  +  A + +    +  L +    Q+  G++   D++
Sbjct: 2   TTAREIMTPDATCVGADDSILDAAKKMADLGVGALPICGSDQRLKGMLTDRDIV 55


>gi|224369797|ref|YP_002603961.1| CBS domain family protein [Desulfobacterium autotrophicum HRM2]
 gi|223692514|gb|ACN15797.1| CBS domain family protein [Desulfobacterium autotrophicum HRM2]
          Length = 153

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               + +V+    +  A+ IL       V VVDE   LKGI+ + D+             
Sbjct: 8   MTRELIVVQADWEIAKAVEILLSNHINGVPVVDENGDLKGILCQSDLIFQQKQVSLPPIL 67

Query: 274 ------------RNFHKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F K+       +VE  M+ NP  +   T +T    L+ + +   + 
Sbjct: 68  TFLDGIIPLSSSKRFEKEFQKIAATTVEQAMVHNPITVGPKTSITQVAALMVEKHFHTIP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VVD   K +GI+   D+L+
Sbjct: 128 VVD-QNKLVGIIGKEDVLK 145



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             ED+M +   V+  D  +  A+++L  ++I+ + VVD+     GI+   DL+
Sbjct: 3   KAEDIMTRELIVVQADWEIAKAVEILLSNHINGVPVVDENGDLKGILCQSDLI 55



 Score = 36.8 bits (84), Expect = 4.4,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
              +   V     +     ++ EK F  + VVD   KL GII + D+ +    +
Sbjct: 98  MVHNPITVGPKTSITQVAALMVEKHFHTIPVVD-QNKLVGIIGKEDVLKTLANE 150


>gi|78042899|ref|YP_359982.1| CBS domain-containing protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995014|gb|ABB13913.1| CBS domain protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 435

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/202 (18%), Positives = 72/202 (35%), Gaps = 15/202 (7%)

Query: 138 SIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
               I    E+  + A  +   L +         G  P  + +++LA  + LAI      
Sbjct: 117 GCLFIVGNREDAQLKALQSGAHLLI--------TGGFPVKTELLELARENNLAILSSPYD 168

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAV 256
            F+     +LH                           +G  + D   +          V
Sbjct: 169 TFTVT--SLLHQALYERLKEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPV 226

Query: 257 VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
           VD+  ++ GIIT  D+      +L    VE++M K+      +T +    +++    I +
Sbjct: 227 VDKENRVCGIITATDVAGAGEDEL----VENLMSKDVISASPETPIGHIARVMTWDRIDL 282

Query: 317 LMVVDDCQKAIGIVHFLDLLRF 338
           + VVD+  K +GI+   +++  
Sbjct: 283 VPVVDESFKLLGIISRQNIIDA 304



 Score = 40.3 bits (93), Expect = 0.48,   Method: Composition-based stats.
 Identities = 14/62 (22%), Positives = 24/62 (38%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K+   ++  D+M+K    +     +    QL      S   VVD   +  GI+   D+  
Sbjct: 185 KEKEVITARDIMVKKVFTLSLGQRVRDWRQLFLNTGHSRFPVVDKENRVCGIITATDVAG 244

Query: 338 FG 339
            G
Sbjct: 245 AG 246



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               P+     +++  R   V VVDE  KL GII+  +I     +
Sbjct: 263 SPETPIGHIARVMTWDRIDLVPVVDESFKLLGIISRQNIIDALQR 307


>gi|87309970|ref|ZP_01092103.1| putative acetoin utilization protein AcuB [Blastopirellula marina
           DSM 3645]
 gi|87287216|gb|EAQ79117.1| putative acetoin utilization protein AcuB [Blastopirellula marina
           DSM 3645]
          Length = 230

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 48/114 (42%), Gaps = 6/114 (5%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                        +  V  G  +++   ++S +    + VVDE ++  G+I++ D+    
Sbjct: 85  ENQVEVRNLMSTQVVRVLPGRSVMEMRRLMSTQHLRHLVVVDETERAVGVISDRDLL--- 141

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              +      DVM      I   ++L   +  + ++NIS L VV+D    +GI+
Sbjct: 142 --AVKDGVAADVMRTPVMAISPQSMLLPTVSHMIENNISCLPVVEDD-HVVGII 192



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 5/70 (7%)

Query: 272 IFRNFHKDLNTL-----SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           I R   KDL+ L      V ++M      +L    +    +L+   ++  L+VVD+ ++A
Sbjct: 72  ILRRLQKDLDLLLENQVEVRNLMSTQVVRVLPGRSVMEMRRLMSTQHLRHLVVVDETERA 131

Query: 327 IGIVHFLDLL 336
           +G++   DLL
Sbjct: 132 VGVISDRDLL 141


>gi|330835694|ref|YP_004410422.1| hexulose-6-phosphate isomerase [Metallosphaera cuprina Ar-4]
 gi|329567833|gb|AEB95938.1| hexulose-6-phosphate isomerase [Metallosphaera cuprina Ar-4]
          Length = 194

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 21/180 (11%)

Query: 45  LQGELSFQFHCAVEKIKAIK-GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           +  E + +    +E+    K G+V++ G G+SG +G   A  L   G  ++ +       
Sbjct: 15  ISPEQTEKMIDTLEQFYERKDGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVLGETIVP- 73

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
                I  +DL I +S SG +  +      AR     LIA+TS   S +   AD+V+ +P
Sbjct: 74  ----AIRENDLAIAISGSGRTKLIVTAAEAARDAKARLIALTSYQDSPLGKLADVVVEIP 129

Query: 164 KEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
              +   +              LAP  +          D +   L+     +E D  ++H
Sbjct: 130 GRTKYSQNEDYFARQILGITEPLAPLGTLFEDTTQVFLDGVVAELMVRLKKTEEDLRLVH 189


>gi|186473573|ref|YP_001860915.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184195905|gb|ACC73869.1| CBS domain containing protein [Burkholderia phymatum STM815]
          Length = 141

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 46/112 (41%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  +     L +A  ++ +   G + V D    L G++T+ DI  R     +    
Sbjct: 8   MTRDLATIGPSQSLREAAKMMDDLNVGSLPVCDGVN-LIGMLTDRDIVVRAVSAGVAPNE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E V+   P    ED  +    + + +  I  + VVD  ++ +GI+   DL
Sbjct: 67  RIEGVVSGPPDWCYEDDDVDTVRKKMEEAQIRRVPVVDREKRLVGILSLGDL 118



 Score = 53.4 bits (127), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V +VM ++   I     L  A +++   N+  L V D     IG++   D++
Sbjct: 2   TTVAEVMTRDLATIGPSQSLREAAKMMDDLNVGSLPVCDGVN-LIGMLTDRDIV 54


>gi|51894341|ref|YP_077032.1| hypothetical protein STH3206 [Symbiobacterium thermophilum IAM
           14863]
 gi|51858030|dbj|BAD42188.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
           14863]
          Length = 141

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 48/114 (42%), Gaps = 20/114 (17%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-------------- 279
               P+  A+  + ++R   V VV     L G++TEGD+ R  ++               
Sbjct: 15  SPNDPIFVALQAMRKQRLPFVPVVRSDGTLYGLVTEGDLVRLIYRATRESGESVPHWIRG 74

Query: 280 -----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                L   SV++V+ +    I  D  L  A +L+ +++  VL VV    + +G
Sbjct: 75  AGRQVLLVQSVKEVVTRELDTIGPDIPLEDAAELMVRNHRKVLPVV-ADGRPMG 127


>gi|330878140|gb|EGH12289.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           morsprunorum str. M302280PT]
 gi|330964449|gb|EGH64709.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           actinidiae str. M302091]
          Length = 288

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HSLQQAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|225011281|ref|ZP_03701738.1| putative signal transduction protein with CBS domains
           [Flavobacteria bacterium MS024-3C]
 gi|225004591|gb|EEG42556.1| putative signal transduction protein with CBS domains
           [Flavobacteria bacterium MS024-3C]
          Length = 156

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 50/139 (35%), Gaps = 8/139 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F  +    K G           +   I        +++ +   ++       V+++ ++L
Sbjct: 6   FQGVRQVQKEGVKEAILVSDYMTTSLITF-SPTQSILEVMECFAKYPISGGPVLNDKKEL 64

Query: 264 KGIITEGDIF------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
            GI++E D        R F+  +   SV   M K  + I     +  A  +   ++   L
Sbjct: 65  VGIVSEADCMKQISESRYFNLPILDKSVASFMSKEVETIDASASIFDAATIFHSNSRRRL 124

Query: 318 MVVDDCQKAIGIVHFLDLL 336
            V+    K +G +   D++
Sbjct: 125 PVL-KDGKLVGQISRKDIV 142



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 12/53 (22%), Positives = 24/53 (45%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V D M  +         +   M+   ++ IS   V++D ++ +GIV   D ++
Sbjct: 23  VSDYMTTSLITFSPTQSILEVMECFAKYPISGGPVLNDKKELVGIVSEADCMK 75


>gi|222640808|gb|EEE68940.1| hypothetical protein OsJ_27819 [Oryza sativa Japonica Group]
          Length = 714

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 34/141 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + +A  ++ +K+  CV VVD    L+GI+T GDI R   +       
Sbjct: 543 MSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKGFESELSEDT 602

Query: 279 ----------DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMV 319
                     D N+  V   + +                DT L+ A  L+    I  L V
Sbjct: 603 PRNGANSSTLDANSSLVSSCLTRGFQYHGNERGLVTCFPDTDLSTAKVLMEVKGIKQLPV 662

Query: 320 V--------DDCQKAIGIVHF 332
           V        D  +K +G++H+
Sbjct: 663 VKRRAGRRNDGRRKVLGLLHY 683



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K    +     +  A +L+     + ++VVD      GIV   D+ R G
Sbjct: 534 LDDLKVSQAMSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKG 593


>gi|254481732|ref|ZP_05094975.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2148]
 gi|214037861|gb|EEB78525.1| transcriptional regulator, RpiR family protein [marine gamma
           proteobacterium HTCC2148]
          Length = 278

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/178 (20%), Positives = 62/178 (34%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S  + A +   + +  LS+ +  L           V  +   +  + + G+G S  +  
Sbjct: 89  DSAAKVAAKIFESTQASLSNTQDHLD---LAALQDVVAAMSNARS-IALCGLGASASVAL 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                L     P                +  DDL+I +S++G +  +  +   A      
Sbjct: 145 DAQHKLLRFPIPIMAHTDIINQRVVAAGLGADDLLICISYTGRTTAMIELAELAVSRGCQ 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +  ITS   S +A    +VL    E         P TS I QL I D LA  L   + 
Sbjct: 205 VAGITS-PHSPLANTCPLVL--GVESGEDTDRYTPMTSRIAQLVIIDILATCLALEQG 259


>gi|49089150|gb|AAT51648.1| PA2192 [synthetic construct]
          Length = 138

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 7   MSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLAVRGLADGLGADR 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 66  PVREVMSGELRYCFEDEEVDHVTKNMAQLEKRRLPVMDRNKRLVGIVSLANI 117



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V ++M +  + +   T L  A  L+RQ +I  L+V ++ ++  G+V   DL
Sbjct: 1   MKVREIMSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDL 52


>gi|78485730|ref|YP_391655.1| CBS domain-containing protein [Thiomicrospira crunogena XCL-2]
 gi|78364016|gb|ABB41981.1| CBS domain containing membrane protein [Thiomicrospira crunogena
           XCL-2]
          Length = 211

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 48/125 (38%), Gaps = 7/125 (5%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +  V     L+DA  ++       + VV+E   L G+I+  DI      D
Sbjct: 75  VKVSDIMVQPVITVAADRSLVDAWEMMRHSNIQHLPVVNESSDLIGLISAHDILMRGIMD 134

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  +   +V DVM K       DT +     ++ ++ +  L ++ +    IGIV  
Sbjct: 135 TEGNIEEIRDGTVADVMSKEVITTKVDTDIRRVAYVMSEYALGCLPIMSEVDTVIGIVTL 194

Query: 333 LDLLR 337
            D++R
Sbjct: 195 SDIVR 199



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 31/58 (53%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
            V D+M++    +  D  L  A +++R  NI  L VV++    IG++   D+L  GI+
Sbjct: 76  KVSDIMVQPVITVAADRSLVDAWEMMRHSNIQHLPVVNESSDLIGLISAHDILMRGIM 133



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 23/46 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           K+   +     ++SE   GC+ ++ E   + GI+T  DI R   ++
Sbjct: 159 KVDTDIRRVAYVMSEYALGCLPIMSEVDTVIGIVTLSDIVRRLAEE 204


>gi|307609537|emb|CBW99035.1| hypothetical protein LPW_08201 [Legionella pneumophila 130b]
          Length = 144

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 54/114 (47%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLN--T 282
               I  +     + + I  + EK  G + V D   +L GI++E DI R  FHK+L+  T
Sbjct: 12  PPRKIAYIHPDDSVKECIKQMVEKDIGALVVFDNDARLIGIVSERDILRCYFHKNLSLET 71

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV+  N  ++     +  AMQ++ +     +++  +  + + I+   DLL
Sbjct: 72  AKVSDVVYTNVTILSPHDSVEKAMQVITETKRRHVLI-QEEGELLAILSIGDLL 124



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 23/43 (53%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  D  +   ++ + + +I  L+V D+  + IGIV   D+LR
Sbjct: 18  YIHPDDSVKECIKQMVEKDIGALVVFDNDARLIGIVSERDILR 60


>gi|256961110|ref|ZP_05565281.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|293384056|ref|ZP_06629950.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis R712]
 gi|293386870|ref|ZP_06631440.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis S613]
 gi|312907993|ref|ZP_07766976.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO 512]
 gi|312978479|ref|ZP_07790217.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO 516]
 gi|256951606|gb|EEU68238.1| sugar isomerase [Enterococcus faecalis Merz96]
 gi|291078536|gb|EFE15900.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis R712]
 gi|291083704|gb|EFE20667.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis S613]
 gi|310626084|gb|EFQ09367.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO 512]
 gi|311288628|gb|EFQ67184.1| 6-phospho 3-hexuloisomerase [Enterococcus faecalis DAPTO 516]
          Length = 192

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 64/160 (40%), Gaps = 10/160 (6%)

Query: 54  HCAVEKIKAIKG--RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
                 IKAI+G   + + G G+SG +    A+ L   G     V    + H   G    
Sbjct: 34  QQVDRMIKAIQGANHIFLAGAGRSGLMIRAFANRLLHLGYSVSLVGEISSPHTKSG---- 89

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP-KEPESCP 170
            DL ++ S SG +  L      A+   + +   T+ + S +   AD V+ +P +  +S  
Sbjct: 90  -DLFLIGSGSGETTSLVNQAKVAKDNGVVIGLFTTNSSSTLGEIADQVVIIPTQSKQSKD 148

Query: 171 HGLAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
             L P  S   Q ++   D++ + L+E    +       H
Sbjct: 149 EALQPMGSLFEQTSLFLYDSIILNLMEKTGETNQTMKTRH 188


>gi|229593435|ref|YP_002875554.1| putative regulatory protein [Pseudomonas fluorescens SBW25]
 gi|312963946|ref|ZP_07778417.1| transcriptional regulator, RpiR family [Pseudomonas fluorescens
           WH6]
 gi|229365301|emb|CAY53649.1| putative regulatory protein [Pseudomonas fluorescens SBW25]
 gi|311281981|gb|EFQ60591.1| transcriptional regulator, RpiR family [Pseudomonas fluorescens
           WH6]
          Length = 288

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L      +   AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREKLDP---VELQKAVTAMSQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ I +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|168182566|ref|ZP_02617230.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum Bf]
 gi|237795928|ref|YP_002863480.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum Ba4 str. 657]
 gi|182674211|gb|EDT86172.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum Bf]
 gi|229261805|gb|ACQ52838.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum Ba4 str. 657]
          Length = 584

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++  ++    + +
Sbjct: 15  MKTDFIKVLKNEAISSAFNRMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENEGKRFSDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E+ + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LENYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNKKIIGIVHLDDL 124


>gi|222479469|ref|YP_002565706.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222452371|gb|ACM56636.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 260

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 4/105 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V     +      ++E        V +G+ ++G ++  D+        +   V  VM  +
Sbjct: 18  VSPDETVKAVAQRMAESNGHNGFPVTQGRTVEGFVSAADLLLA----DDEAPVFTVMSND 73

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V   D  +T A +++ +  I  L VVDD    +GI+   D++R
Sbjct: 74  LIVAHPDMKVTDAARVILRSGIQRLPVVDDADNLVGIISNTDVVR 118



 Score = 41.0 bits (95), Expect = 0.24,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + + +      + DA  ++       + VVD+   L GII+  D+ R+  +      V
Sbjct: 70  MSNDLIVAHPDMKVTDAARVILRSGIQRLPVVDDADNLVGIISNTDVVRSQIERATPSKV 129

Query: 286 EDVM 289
             +M
Sbjct: 130 GKLM 133


>gi|160938097|ref|ZP_02085453.1| hypothetical protein CLOBOL_02991 [Clostridium bolteae ATCC
           BAA-613]
 gi|158438901|gb|EDP16657.1| hypothetical protein CLOBOL_02991 [Clostridium bolteae ATCC
           BAA-613]
          Length = 289

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/163 (22%), Positives = 59/163 (36%), Gaps = 4/163 (2%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
            +  VE +   +  V + GIG S  +   +   L              A       I   
Sbjct: 122 LNQCVELLDRSQT-VYLFGIGSSLLVARDMYLKLLRVNKACVICDDWHAQLLQARNIRSC 180

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           DL +++S+SG ++E+      AR    P+I I+   +S +   AD  L +         G
Sbjct: 181 DLALIVSYSGLTEEMITCAREARLREAPVITISRFEQSPLVRLADYNLAVAATELIFRSG 240

Query: 173 LAPTTSAIMQLAIGDALAIALLESR-NFSENDFYVLHPGGKLG 214
               +S I QL + D L  A +  R +     F   H     G
Sbjct: 241 A--MSSRISQLNMIDILYTAYVHKRYDECMEQFRKTHIAKSEG 281


>gi|148380443|ref|YP_001254984.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A str. ATCC 3502]
 gi|153931019|ref|YP_001384666.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A str. ATCC 19397]
 gi|153935046|ref|YP_001388187.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A str. Hall]
 gi|168180628|ref|ZP_02615292.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum NCTC 2916]
 gi|148289927|emb|CAL84040.1| sigma-54-dependent transcriptional activator [Clostridium botulinum
           A str. ATCC 3502]
 gi|152927063|gb|ABS32563.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A str. ATCC 19397]
 gi|152930960|gb|ABS36459.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A str. Hall]
 gi|182668481|gb|EDT80460.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum NCTC 2916]
 gi|322806756|emb|CBZ04325.1| sigma-54 dependent DNA-binding response regulator [Clostridium
           botulinum H04402 065]
          Length = 584

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++  ++    + +
Sbjct: 15  MKTDFIKVFKNEAISSAFNKMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENQGKKFSDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E+ + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LENYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNRKIIGIVHLDDL 124


>gi|315647813|ref|ZP_07900914.1| 6-phospho 3-hexuloisomerase [Paenibacillus vortex V453]
 gi|315276459|gb|EFU39802.1| 6-phospho 3-hexuloisomerase [Paenibacillus vortex V453]
          Length = 187

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 73/185 (39%), Gaps = 13/185 (7%)

Query: 31  IIAEKRGLS-SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           I      ++  +  S+Q     Q    +++I   +  + + G G+SG +    A  L   
Sbjct: 5   IFQHADVIAREISESVQKVDGTQIKELIKRIMRSES-IFVAGGGRSGLMIRSFAMRLMQM 63

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G     V            I   DLI++ S SG +  L A+   A+     L  +T + +
Sbjct: 64  GYKVHVVGDTVTP-----AIGERDLILIGSGSGETQSLVAMAQKAKSIGSALAVVTIKPE 118

Query: 150 SVVACHADIVLTLP----KEPESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSEND 203
           S +   +D V+ LP     + +     + P  S   Q    + DA+ + L+E +    ++
Sbjct: 119 SRLGKLSDTVVVLPGATKDQNQDNLVTVQPMASLFEQTLLIVLDAVILRLMEQKKLQSDN 178

Query: 204 FYVLH 208
            + LH
Sbjct: 179 MFGLH 183


>gi|297527119|ref|YP_003669143.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
 gi|297256035|gb|ADI32244.1| putative signal transduction protein with CBS domains
           [Staphylothermus hellenicus DSM 12710]
          Length = 316

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 14/117 (11%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------------KD 279
           ++ G  + +A+  + +  F  + VV E   + GIIT  DI R F              ++
Sbjct: 194 IETGKSIKEAMEKIIKYGFRRIPVVGEN-VVLGIITAMDIVRYFGTHEAFKNTVSGDIRE 252

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              + V+D+M++   V+  D  L +    + + N+   +VV+D  + +GIV   D+L
Sbjct: 253 ALRIPVDDIMVRELVVVKPDDDLGLVAHKMAEKNVGSALVVNDKMELLGIVTERDIL 309



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 49/114 (42%), Gaps = 2/114 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
              +  +  I   L + +  +     G V VV    ++ G+ITE D+ +     ++  + 
Sbjct: 123 MEKNPIVAYIDEKLSNILEKMVMNEIGIVPVVLRDGRVYGVITEHDLIKYLSYSVSIGVK 182

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V DVM      I     +  AM+ + ++    + VV      +GI+  +D++R+
Sbjct: 183 VADVMSSPVVAIETGKSIKEAMEKIIKYGFRRIPVV-GENVVLGIITAMDIVRY 235



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 25/146 (17%), Positives = 56/146 (38%), Gaps = 18/146 (12%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII- 267
           P  +           + +   +       PL++A+  +++     +  V    K+ G++ 
Sbjct: 29  PNFEDRIYKSTEELEIIAKRPVKQASPSTPLLEAVEEMAKGYRSLIITV--SNKIAGLLL 86

Query: 268 -TE-------GDIFRNFHKDL-------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            T        G+ F+   +             VE +M KNP V   D  L+  ++ +  +
Sbjct: 87  LTHVINYLGGGEYFKIVAERYGYNIYSALQEPVETIMEKNPIVAYIDEKLSNILEKMVMN 146

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I ++ VV    +  G++   DL+++
Sbjct: 147 EIGIVPVVLRDGRVYGVITEHDLIKY 172



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 36/171 (21%), Positives = 61/171 (35%), Gaps = 21/171 (12%)

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI-TSENKSVVACHADIVLTLPKE 165
           G+IT  DLI  LS+S     +   +  A   S P++AI T ++               KE
Sbjct: 162 GVITEHDLIKYLSYS-----VSIGVKVADVMSSPVVAIETGKSI--------------KE 202

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
                         ++   +   +  A+   R F  ++ +     G +            
Sbjct: 203 AMEKIIKYGFRRIPVVGENVVLGIITAMDIVRYFGTHEAFKNTVSGDIREAL-RIPVDDI 261

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               + +VK    L      ++EK  G   VV++  +L GI+TE DI    
Sbjct: 262 MVRELVVVKPDDDLGLVAHKMAEKNVGSALVVNDKMELLGIVTERDILYAL 312


>gi|290957527|ref|YP_003488709.1| hypothetical protein SCAB_30471 [Streptomyces scabiei 87.22]
 gi|260647053|emb|CBG70152.1| conserved hypothetical protein [Streptomyces scabiei 87.22]
          Length = 144

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE D+  +    +  +         
Sbjct: 14  IGPDHTLRQAAALMSARRIGAAVVLDPDAGGLGILTERDVLNSVGLGQSPDAERAHAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + +       L+V+D+    IGIV   D++R
Sbjct: 74  TDVVFATPSWTLEEAARAMTHGGFRHLIVLDE-GAPIGIVSVRDIIR 119



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I  D  L  A  L+    I   +V+D     +GI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPDHTLRQAAALMSARRIGAAVVLDPDAGGLGILTERDVL 54


>gi|257086207|ref|ZP_05580568.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis D6]
 gi|256994237|gb|EEU81539.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecalis D6]
          Length = 397

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + VVD    LKG I   D+     +     SV D++ K+
Sbjct: 265 ITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI---DVETLDQQRGKASSVGDILNKD 321

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +  LL  A+Q + +  +  + VVD  ++ +GI+ 
Sbjct: 322 VFFVQKTALLRDALQRILKRGLKYVPVVDGQKRVVGILT 360



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 29/57 (50%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +  +V++VM+ +   I  +  L  A++L+R+  +  L+VVD+     G +
Sbjct: 243 RLLQAKPDFTTVDEVMLNSAITITPEKSLQEAIKLMREKRVDTLLVVDNSHVLKGFI 299


>gi|145590857|ref|YP_001152859.1| sugar isomerase (SIS) [Pyrobaculum arsenaticum DSM 13514]
 gi|145282625|gb|ABP50207.1| hexulose-6-phosphate isomerase [Pyrobaculum arsenaticum DSM 13514]
          Length = 201

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 21/186 (11%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L +L   ++ +    F   +E+      ++++ G+G+SG +G   A  L   G  S+ + 
Sbjct: 16  LKAL-DKIKLDEIEAFVKILEESYKSNKKILVVGVGRSGLVGRGFAMRLRHLGLRSYVLG 74

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D+++ +S SGS+  + A    A++    ++A+TS   S +   AD
Sbjct: 75  ETITPP-----VEEGDVVVAISGSGSTQIVVAAAEAAKKMKARVVAVTSYYDSPLGRVAD 129

Query: 158 IVLTLPKEPESCPHG-------------LAPTTSAIMQLAI--GDALAIALLESRNFSEN 202
           +V+ +P   +                  L+P  +     A+   D++   L++    +E+
Sbjct: 130 LVVFVPGRTKVAAMDDYFARQILGIHEPLSPLGTLFEDTAMVVLDSIIAELMKRMGKNES 189

Query: 203 DFYVLH 208
           D    H
Sbjct: 190 DLAKRH 195


>gi|299820772|ref|ZP_07052661.1| IMP dehydrogenase [Listeria grayi DSM 20601]
 gi|299817793|gb|EFI85028.1| IMP dehydrogenase [Listeria grayi DSM 20601]
          Length = 500

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 43/194 (22%), Positives = 68/194 (35%), Gaps = 21/194 (10%)

Query: 155 HADIVLTLPKEPESCPHGL-----APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
             ++ L  P                P  SAIMQ    D +AIAL +    S    ++   
Sbjct: 28  PTNVALKTPVTKFKKGQQPEISMNIPLVSAIMQAVSDDEMAIALAKEGGIS----FIFG- 82

Query: 210 GGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QK 262
              + +     + V +      L    ++    L D + +  +     VAV  +G    K
Sbjct: 83  SQSIESEAAMVARVKNHKAGFVLSDSNIRPDQTLQDVLDLKEKTGHSTVAVTKDGTSTGK 142

Query: 263 LKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           L GI+T  D      +   T  V D M          + T L  A  ++  H ++ L ++
Sbjct: 143 LLGIVTSRDYR--ITRMQLTEKVADFMTPFEKLTTAHKTTTLKEANNIIWDHKLNALPLI 200

Query: 321 DDCQKAIGIVHFLD 334
           DD Q    IV   D
Sbjct: 201 DDDQHLAYIVFRKD 214


>gi|218885517|ref|YP_002434838.1| signal transduction protein with CBS domains [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218756471|gb|ACL07370.1| putative signal transduction protein with CBS domains
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 142

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----------- 282
           K    L  A +++   R   + +VD     +G++T  DI                     
Sbjct: 16  KKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILSATISRFADVDEAVQNEIDA 75

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V ++M  +   +  DTLL  A +LL  H    L V  +  + +GIV   D L+ 
Sbjct: 76  GIPVGEIMRTDVVRVHPDTLLRDAAELLLHHKYGCLPVT-EGDRLVGIVTEADFLKL 131



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M      + +   L  A  L++   I  + +VD      G++   D+L  
Sbjct: 4   VGDLMSTGLFTLKKTDSLRAARSLMQLARIRHIPIVDAKGDFQGLLTHRDILSA 57



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
               +  V     L DA  +L   ++GC+ V  EG +L GI+TE D  +
Sbjct: 83  MRTDVVRVHPDTLLRDAAELLLHHKYGCLPVT-EGDRLVGIVTEADFLK 130


>gi|21227407|ref|NP_633329.1| hypothetical protein MM_1305 [Methanosarcina mazei Go1]
 gi|20905771|gb|AAM31001.1| conserved protein [Methanosarcina mazei Go1]
          Length = 261

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 60/148 (40%), Gaps = 10/148 (6%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           L + D   I +L  R+ +E             +L           D+   V       DA
Sbjct: 38  LVVHDNQIIGVLTMRSLTEQLGTRRKQSKPASSL----HVATAVSDNFVKVLPDTDTRDA 93

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +T++ +K  G V +V E     G +T  ++     ++  T  V +VM K P  +     +
Sbjct: 94  LTLMKKK--GGVIIVSENGNALGWVTPQEL---IKENRFTGFVGEVMEKYPITVSPSDRV 148

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + A +L+   NI  L V+ +  K +GI+
Sbjct: 149 SHARRLILDKNIGRLPVI-ENGKLVGII 175



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 49/113 (43%), Gaps = 13/113 (11%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------H 277
              V     +  A  ++ +K  G + V+ E  KL GII E DI                 
Sbjct: 139 PITVSPSDRVSHARRLILDKNIGRLPVI-ENGKLVGIIAEDDIAFAMRSFRDLVADNQQD 197

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +  L V D+M ++   +  +T L+ A+  + +H++  + V++  ++ +G +
Sbjct: 198 SRIKNLLVGDIMTRSVVSVHTNTPLSDAVNTMLEHDVGGVPVLNLEEELVGFL 250



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M   P  I +   ++ A+ L+ + +   L+VV    + IG++    L 
Sbjct: 4   MQVKDIM-VQPHKIDKSDTISHALDLMEKKDTKRLLVV-HDNQIIGVLTMRSLT 55


>gi|332161529|ref|YP_004298106.1| DNA-binding transcriptional regulator HexR [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|318605510|emb|CBY27008.1| phosphogluconate repressor HexR, RpiR family [Yersinia
           enterocolitica subsp. palearctica Y11]
 gi|325665759|gb|ADZ42403.1| DNA-binding transcriptional regulator HexR [Yersinia enterocolitica
           subsp. palearctica 105.5R(r)]
 gi|330863485|emb|CBX73603.1| HTH-type transcriptional regulator hexR [Yersinia enterocolitica
           W22703]
          Length = 289

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/150 (20%), Positives = 59/150 (39%), Gaps = 4/150 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +              +  D
Sbjct: 119 NRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDIVMQRMSCMNSSEGD 177

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  + + AR     +IAIT+   + +A  A + L L    ++  +  
Sbjct: 178 VVVLISHTGRTKSLVELAHLARENDATVIAITTR-DTPLANEATLPLLLDVPEDTDMY-- 234

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
            P  S I QL + D LA      R     D
Sbjct: 235 MPMVSRIAQLTLIDVLATGFTLRRGAKFRD 264


>gi|306825257|ref|ZP_07458599.1| transcription regulator [Streptococcus sp. oral taxon 071 str.
           73H25AP]
 gi|304432693|gb|EFM35667.1| transcription regulator [Streptococcus sp. oral taxon 071 str.
           73H25AP]
          Length = 250

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/160 (21%), Positives = 72/160 (45%), Gaps = 12/160 (7%)

Query: 37  GLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +  L++S+Q E L  Q     + I   K +V+  G+G S  +    +   +  G  SF 
Sbjct: 88  AIQFLQTSVQDEALKKQLSEIADLIVQAK-QVIFLGVGTSLSLAEYGSYLFSGIGIFSFA 146

Query: 96  VH----AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           +     + +  H +L     D L+I LS SG ++E+  ++   +  +  ++++T+ + S 
Sbjct: 147 ITNPFYSLKLHHSNL----EDVLVIALSVSGETEEVLTLVQGFKERNAKIVSLTNTDIST 202

Query: 152 VACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           ++  +DI L+  +P             T+ I  +   ++L
Sbjct: 203 LSQLSDINLSYFMPVAYADSSLRSTNLTTQIPVVYFLESL 242


>gi|15679233|ref|NP_276350.1| inosine-5'-monophosphate dehydrogenase related protein I
           [Methanothermobacter thermautotrophicus str. Delta H]
 gi|2622333|gb|AAB85711.1| inosine-5'-monophosphate dehydrogenase related protein I
           [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 275

 Score = 67.6 bits (164), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIF------RN 275
             +    +     + DA+ ++ ++    + V+    D  ++L GI+TE DI       R 
Sbjct: 10  MSEDPVCIDKDQNICDALRLMDKRNVSRLLVINTNSDHERELVGIVTEKDIALKLGSSRY 69

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   +   V  VM         D     A  ++ ++NI  L V+    + +GIV   DL
Sbjct: 70  GNMAPSHFHVSTVMTPELITAEPDMDAGNAASVMLENNIGSLPVL-HDGEIMGIVTKSDL 128

Query: 336 L 336
           L
Sbjct: 129 L 129



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 47/110 (42%), Gaps = 11/110 (10%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDV 288
           +      +A +++ E   G + V+    ++ GI+T+ D+      R + K     +  DV
Sbjct: 91  EPDMDAGNAASVMLENNIGSLPVL-HDGEIMGIVTKSDLLDICRGRAYEKY----TAADV 145

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M      +     +  A +++    I  L+V+++ +   GI+   D+ R 
Sbjct: 146 MSTEMITVSPAERVVHARRIMIDAGIGRLLVMEEDE-LAGILTARDMTRA 194



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 30/123 (24%), Positives = 52/123 (42%), Gaps = 15/123 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
               +  V     ++ A  I+ +   G + V++E + L GI+T  D+ R           
Sbjct: 146 MSTEMITVSPAERVVHARRIMIDAGIGRLLVMEEDE-LAGILTARDMTRAVINFRKLVPD 204

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  L VED+M +N + I E+T +T    L+ +       V+   Q+  GIV   
Sbjct: 205 RHKPSRIRNLLVEDIMKQNVRTIEEETPVTEVASLMLETGYGGFPVI--KQEVEGIVTKT 262

Query: 334 DLL 336
           D+L
Sbjct: 263 DIL 265



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 40/65 (61%), Gaps = 5/65 (7%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVHFLDL 335
           + ++ ++++M ++P  I +D  +  A++L+ + N+S L+V+    D  ++ +GIV   D+
Sbjct: 1   MESMIIKNIMSEDPVCIDKDQNICDALRLMDKRNVSRLLVINTNSDHERELVGIVTEKDI 60

Query: 336 -LRFG 339
            L+ G
Sbjct: 61  ALKLG 65


>gi|284009022|emb|CBA75961.1| RpiR-family transcriptional regulator [Arsenophonus nasoniae]
          Length = 294

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 5/164 (3%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQ---FHCAVEKIKAIKGRV 67
           +T + H+++ N         +IA+K     ++S ++         F+     +   + RV
Sbjct: 87  LTERSHNVIHNQIASNDSLMVIAQKLAQEKIDSVMETTRQINYPIFNKVATLVNNAQ-RV 145

Query: 68  VITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDEL 127
            I GIG SG +   L   L   G  +               +T  D+ I +S+SG    +
Sbjct: 146 QIVGIGGSGLVAKDLYYKLQKIGITTLVDLDHHVQITTALTLTAKDIQIAISFSGKRKNI 205

Query: 128 KAILYYARRFSIPLIAITSENKS-VVACHADIVLTLPKEPESCP 170
                 A++    +IAI    +   +   AD VL          
Sbjct: 206 CEAAAIAKQHGAKVIAIVGNKQQKPLVKLADYVLESVAGENEWR 249


>gi|170724284|ref|YP_001751972.1| RpiR family transcriptional regulator [Pseudomonas putida W619]
 gi|169762287|gb|ACA75603.1| transcriptional regulator, RpiR family [Pseudomonas putida W619]
          Length = 288

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L          AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREHLDP---HALQQAVSAMAQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLSAAAYSDPHMQAMSAVTLKPGDVAVCISQSGRSKDLLITANLVRESGAN 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|146304019|ref|YP_001191335.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145702269|gb|ABP95411.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 131

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 2/103 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
            I   + +   ++ E     V + +E  ++  I+TE DI R     L+  +    + K P
Sbjct: 17  PITSSIREVAQVMRENDVSSVVLTNERGEIVAIVTERDITRAVADGLDYSTPAGKIGKGP 76

Query: 294 -KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  D  L  A++L+ +  I  L+V D  Q  +GIV   ++
Sbjct: 77  VISVDRDLPLFEALELMGEKKIRHLLVKDKDQ-PLGIVSLREI 118


>gi|281491150|ref|YP_003353130.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           lactis KF147]
 gi|281374900|gb|ADA64419.1| Transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           lactis KF147]
          Length = 273

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/148 (19%), Positives = 61/148 (41%), Gaps = 3/148 (2%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           +   + KN+++   +++I   K   + L ++            ++ I  +K        G
Sbjct: 77  ENIKVNKNTSLNELIKNISKIKT--TELIAATDNLDIDNLQSIIKIITNVK-LTHFVASG 133

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            +  +    +      G  S      +        + ++DL+IV+S SG S  L  ++  
Sbjct: 134 NTIPVAEDASYRFNQLGITSVVFDDWQVQTAFTLNMRKEDLLIVISNSGESKSLIKLINI 193

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLT 161
           A+   IP+I+IT+   S +A  ++  LT
Sbjct: 194 AKEKKIPIISITNHPDSPIARLSNFHLT 221


>gi|15597388|ref|NP_250882.1| hypothetical protein PA2192 [Pseudomonas aeruginosa PAO1]
 gi|254240613|ref|ZP_04933935.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
 gi|9948214|gb|AAG05580.1|AE004646_1 conserved hypothetical protein [Pseudomonas aeruginosa PAO1]
 gi|126193991|gb|EAZ58054.1| conserved hypothetical protein [Pseudomonas aeruginosa 2192]
          Length = 137

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL-NTL 283
               +  V     L +A  ++ +   G + V +EG++L G++T+ D+  R     L    
Sbjct: 7   MSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDLAVRGLADGLGADR 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM    +   ED  +    + + Q     L V+D  ++ +GIV   ++
Sbjct: 66  PVREVMSGELRYCFEDEEVDHVTKNMAQLEKRRLPVMDRNKRLVGIVSLANI 117



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V ++M +  + +   T L  A  L+RQ +I  L+V ++ ++  G+V   DL
Sbjct: 1   MKVREIMSREVRTVTPQTTLGEAALLMRQADIGALLV-NEGERLTGVVTDRDL 52


>gi|194334544|ref|YP_002016404.1| glucosamine--fructose-6-phosphate aminotransferase
           [Prosthecochloris aestuarii DSM 271]
 gi|194312362|gb|ACF46757.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Prosthecochloris aestuarii DSM 271]
          Length = 628

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 10/150 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           +E+++  K R+VI   G S H   IG  L    A    P    +A+E       ++   D
Sbjct: 307 LEQLREAK-RIVICACGTSWHAGLIGEYLIEEFAR--IPVEVDYASE-FRYRSPIVGPGD 362

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     ++ I +   S +A   D  +     PE    G+
Sbjct: 363 VMIVISQSGETADTLAALRLAKEKGAMVVGICNVVGSTIARETDCGMYTHAGPE---IGV 419

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSEND 203
           A T +   Q+ +   LA+AL + R  ++ +
Sbjct: 420 ASTKAFTAQVIVLTMLALALSKDRTMTDGE 449


>gi|296445116|ref|ZP_06887076.1| putative signal transduction protein with CBS domains [Methylosinus
           trichosporium OB3b]
 gi|296257290|gb|EFH04357.1| putative signal transduction protein with CBS domains [Methylosinus
           trichosporium OB3b]
          Length = 143

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           + H G  +        L++A   L+ +  G + VVD    + G+ITE DI     +    
Sbjct: 7   LAHKGTEVATTAPSRKLLEAAADLTRRGIGALVVVDADDMVIGLITERDIVAAIARHGVE 66

Query: 283 L---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                V   M ++P  I ED  L   M+ +       L V+    +  GIV   D+++
Sbjct: 67  ALYDEVARFMTRDPMSIDEDHSLDATMEAMTIERRRHLPVM-RDGRLAGIVSIGDVVK 123



 Score = 39.1 bits (90), Expect = 0.92,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 17/44 (38%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  L  A   L +  I  L+VVD     IG++   D++  
Sbjct: 16  TTAPSRKLLEAAADLTRRGIGALVVVDADDMVIGLITERDIVAA 59


>gi|226493257|ref|NP_001145714.1| hypothetical protein LOC100279218 [Zea mays]
 gi|219884135|gb|ACL52442.1| unknown [Zea mays]
          Length = 430

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 55/159 (34%), Gaps = 33/159 (20%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            H G     + +    V  +     + V     + +   ++ EK+  CV VVD    L+G
Sbjct: 241 YHYGSNNEEMLLDDLKVSQAMTKHYVKVTPTFTIEETTRLMQEKQQSCVVVVDNEDFLEG 300

Query: 266 IITEGDIFRNF---------------HKDLNTLSVEDVMIKNP---------KVILEDTL 301
           I+T GD+ R                   D N+  V   + +                DT 
Sbjct: 301 IVTLGDLRRKGFVPSENSDSTQANSSTVDANSSLVSSCLTRGFQFHGNERGLVTCFPDTD 360

Query: 302 LTVAMQLLRQHNISVLMVV--------DDCQKAIGIVHF 332
           L  A  L+    I  L VV        D  +K +G++H+
Sbjct: 361 LGTAKVLMEVKGIKQLPVVKRGAGRRNDGRRKVLGLLHY 399



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K+   +     +    +L+++   S ++VVD+     GIV   DL R G
Sbjct: 252 LDDLKVSQAMTKHYVKVTPTFTIEETTRLMQEKQQSCVVVVDNEDFLEGIVTLGDLRRKG 311

Query: 340 II 341
            +
Sbjct: 312 FV 313


>gi|163857355|ref|YP_001631653.1| hypothetical protein Bpet3043 [Bordetella petrii DSM 12804]
 gi|163261083|emb|CAP43385.1| conserved hypothetical protein [Bordetella petrii]
          Length = 152

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMI 290
               P+  A+  +SE+  G + V+ E   L G++T  +I R+ H     L   ++  +M 
Sbjct: 19  SPDMPVAMAVQTMSEQDIGSL-VIMESGMLAGMLTFREIIRHLHDHDGQLGQTTIRAIMD 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  DAPVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLMGVISFYDMAQA 124


>gi|33596534|ref|NP_884177.1| hypothetical protein BPP1916 [Bordetella parapertussis 12822]
 gi|33566303|emb|CAE37216.1| conserved hypothetical protein [Bordetella parapertussis]
          Length = 157

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/108 (18%), Positives = 49/108 (45%), Gaps = 5/108 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMI 290
                +  A+  +SE+  G + V+ E   L G++T  +I R+  +   ++   ++  +M 
Sbjct: 19  SPDTHVSMAVQTMSEQDIGSL-VIMESGMLAGMLTFREIIRHIDQHGGNVGDTTIRAIMD 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             P  +  +T      +L+ + +   + V+D     +G++ F D+ + 
Sbjct: 78  DAPVSVSPNTSADEVQRLMLEKHARYIPVMDGP-TLLGVISFYDMAQA 124


>gi|331005669|ref|ZP_08329036.1| Inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           IMCC1989]
 gi|330420527|gb|EGG94826.1| Inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           IMCC1989]
          Length = 488

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  +A M       LAIAL +          ++H    +         V         
Sbjct: 41  NIPLVAAAMDTVTESHLAIALAQEGGIG-----IIHKSMSIEQQAQQVRAVKKFEAGVVR 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           +   ++    + + + +        V V+D    L GI+T  D+   F  +L   SV  +
Sbjct: 96  NPITIESSATIRELVNLTKVNNISGVPVLD-SGDLVGIVTGRDVR--FETNL-DASVASI 151

Query: 289 MI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E T      +LL +H I  ++VV+D  +  G+V   D+ + 
Sbjct: 152 MTGKDQLVTVKEGTSPETVRELLHKHRIEKVLVVNDNFELSGLVTVKDINKA 203


>gi|27363916|ref|NP_759444.1| putative acetoin utilization protein AcuB [Vibrio vulnificus CMCP6]
 gi|27360033|gb|AAO08971.1| Putative acetoin utilization protein AcuB [Vibrio vulnificus CMCP6]
          Length = 151

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 11/122 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   +     L DA  ++       + VVD  ++L GI+T+ D+       L+  S
Sbjct: 7   MMTRHPHTLLRSHTLGDAKNMMEALDIRHIPVVDANKQLLGIVTQRDLLSAQESSLHKSS 66

Query: 285 VE----------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            E          +VM  +   +     L  +   +++H +  L VV+     +GI+   D
Sbjct: 67  AENSYTTATPLYEVMHTSIMTVEPKAGLKESAIYMQKHKVGCLPVVEK-GHLVGIITDTD 125

Query: 335 LL 336
            +
Sbjct: 126 FV 127



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M ++P  +L    L  A  ++   +I  + VVD  ++ +GIV   DLL  
Sbjct: 3   KVEDMMTRHPHTLLRSHTLGDAKNMMEALDIRHIPVVDANKQLLGIVTQRDLLSA 57



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + ++  R+        LH      +             SI  V+    L ++   + + +
Sbjct: 46  LGIVTQRDLLSAQESSLHKSSAENSYTTATPLYEVMHTSIMTVEPKAGLKESAIYMQKHK 105

Query: 251 FGCVAVVDEGQKLKGIITEGD 271
            GC+ VV E   L GIIT+ D
Sbjct: 106 VGCLPVV-EKGHLVGIITDTD 125


>gi|325479586|gb|EGC82682.1| transcriptional regulator, RpiR family [Anaerococcus prevotii
           ACS-065-V-Col13]
          Length = 276

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/164 (18%), Positives = 60/164 (36%), Gaps = 3/164 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +       +     + I   K R+ I G+G SG++  + A  L   G  +  V    
Sbjct: 98  LKKTYNLYDEEKCKTLTQYILDSK-RIYIYGVGSSGYLAEEFAHRLIRLGLDAEAVINTH 156

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
               +   I  DD I+ +S+SG S E+   L            + +    ++  + DI++
Sbjct: 157 EILLNQVRIKADDFIMGISYSGKSIEVIEALKSGAEKKAKTALLVANYSEILDEYFDIII 216

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF 204
            L  +       +   +     + + D L   L + R  S   +
Sbjct: 217 LLAHKQNLEYSNII--SPQFPAMILLDTLFKDLYDKRQESGEVY 258


>gi|302337828|ref|YP_003803034.1| signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
 gi|301635013|gb|ADK80440.1| putative signal transduction protein with CBS domains [Spirochaeta
           smaragdinae DSM 11293]
          Length = 319

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 19/101 (18%), Positives = 42/101 (41%), Gaps = 1/101 (0%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV 295
             PL +    +  +    + +  E  +L GI++  DI R         + E  M +    
Sbjct: 38  NTPLREIQQTMRRRGITGMPI-AESGRLFGIVSMDDIIRALEGGYIDEAAEMHMSRKLIF 96

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ED  ++ A+    +++     ++D   K +GI+   D++
Sbjct: 97  LEEDMPVSFAISYFEKYSYHRFPILDKTNKLVGIITSRDII 137



 Score = 50.3 bits (119), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L V+DVM K       +T L    Q +R+  I+ + +  +  +  GIV   D++R 
Sbjct: 19  IYRLKVKDVMCKEVTTAGRNTPLREIQQTMRRRGITGMPIA-ESGRLFGIVSMDDIIRA 76



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 27/59 (45%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           MH    +  ++   P+  AI+   +  +    ++D+  KL GIIT  DI      ++N 
Sbjct: 88  MHMSRKLIFLEEDMPVSFAISYFEKYSYHRFPILDKTNKLVGIITSRDIITRLLVEINK 146


>gi|134094918|ref|YP_001099993.1| hypothetical protein HEAR1711 [Herminiimonas arsenicoxydans]
 gi|133738821|emb|CAL61868.1| Putative HPP family protein with CBS domain [Herminiimonas
           arsenicoxydans]
          Length = 390

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/190 (14%), Positives = 62/190 (32%), Gaps = 24/190 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSEND---FYVLHPGGKLGTLFVCASDVMHSGDS 229
           +APT    +     D +     +  + S +D     +                       
Sbjct: 191 VAPTERTGITPEDLDVVLARYNQVLDISRDDLESIMLQTEMQAYRRRLDGTKCADIMSKD 250

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLN 281
           +  V+ G  L +A           + V+D G+++ GI+T+ D  ++          + L 
Sbjct: 251 VIYVEFGTELAEAWRQFKSHDLTALPVIDRGRRVIGIVTKADFLKHAEVEAHEGLGRKLA 310

Query: 282 TLS-------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            L              V  +M K       +  +   + L+    +  + V+DD  + +G
Sbjct: 311 NLIRPSLLSHTEKHEVVGQIMTKEVYTANANQSIVELVPLMSDSEVHQMPVIDDDNRLVG 370

Query: 329 IVHFLDLLRF 338
           ++   D++  
Sbjct: 371 MITQTDMIAA 380


>gi|90412152|ref|ZP_01220158.1| hypothetical protein P3TCK_27684 [Photobacterium profundum 3TCK]
 gi|90326876|gb|EAS43261.1| hypothetical protein P3TCK_27684 [Photobacterium profundum 3TCK]
          Length = 629

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/151 (17%), Positives = 54/151 (35%), Gaps = 15/151 (9%)

Query: 202 NDFYVLHPG---GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            D   L            F  +          P V     +  A   ++++    + ++D
Sbjct: 129 EDNARLRQAISNQDDQNDFTTSKVRSLLTRDAPFVYKNESIQLAAIKMADESVSSLLIID 188

Query: 259 ---------EGQKLKGIITEGDI-FRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQ 307
                    +   + GIIT+ D+  R     ++   +V  VM      +  +  +  AM 
Sbjct: 189 PDILDDNDNDTSSVIGIITDRDLCTRVLASGIDPNDTVASVMTCEVVSLDHNAYVYEAML 248

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + N+  L +    +K IGI+   D++R+
Sbjct: 249 TMLRSNVHHLPIF-KDKKPIGIIETTDIVRY 278


>gi|212636082|ref|YP_002312607.1| cyclic nucleotide-binding protein [Shewanella piezotolerans WP3]
 gi|212557566|gb|ACJ30020.1| Cyclic nucleotide-binding:CBS:Putative nucleotidyltransferase
           DUF294 [Shewanella piezotolerans WP3]
          Length = 628

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 51/117 (43%), Gaps = 9/117 (7%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEG------QKLKGIITEGDI-FRNFHKDLN- 281
             ++ I   +    +I+SE+      + D            GIIT  D+  +   + L+ 
Sbjct: 161 PVMLPINTTVQGVASIMSEENVSAAIIHDPNLADEGGNSFVGIITVRDLCAKVIAEGLDV 220

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              V +VM      +  +  +  AM L+ ++N+  L ++   ++ IG++   D++R+
Sbjct: 221 NTPVVEVMSTELISLDHNAYIFEAMLLMLRYNVHHLPIL-KNKQPIGLIEVTDIIRY 276


>gi|37678927|ref|NP_933536.1| putative acetoin utilization protein AcuB [Vibrio vulnificus YJ016]
 gi|320157297|ref|YP_004189676.1| putative acetoin utilization protein AcuB [Vibrio vulnificus
           MO6-24/O]
 gi|37197668|dbj|BAC93507.1| putative acetoin utilization protein AcuB [Vibrio vulnificus YJ016]
 gi|319932609|gb|ADV87473.1| putative acetoin utilization protein AcuB [Vibrio vulnificus
           MO6-24/O]
          Length = 151

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 46/122 (37%), Gaps = 11/122 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                   +     L DA  ++       + VVD  ++L GI+T+ D+       L+  S
Sbjct: 7   MMTRHPHTLLRSHTLGDAKNMMEALDIRHIPVVDANKQLLGIVTQRDLLSAQESSLHKSS 66

Query: 285 VE----------DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            E          +VM  +   +     L  +   +++H +  L VV+     +GI+   D
Sbjct: 67  AENSYTAATPLYEVMHTSIMTVEPKAGLKESAIYMQKHKVGCLPVVEK-GHLVGIITDTD 125

Query: 335 LL 336
            +
Sbjct: 126 FV 127



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M ++P  +L    L  A  ++   +I  + VVD  ++ +GIV   DLL  
Sbjct: 3   KVEDMMTRHPHTLLRSHTLGDAKNMMEALDIRHIPVVDANKQLLGIVTQRDLLSA 57



 Score = 37.6 bits (86), Expect = 2.7,   Method: Composition-based stats.
 Identities = 18/81 (22%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR 250
           + ++  R+        LH      +             SI  V+    L ++   + + +
Sbjct: 46  LGIVTQRDLLSAQESSLHKSSAENSYTAATPLYEVMHTSIMTVEPKAGLKESAIYMQKHK 105

Query: 251 FGCVAVVDEGQKLKGIITEGD 271
            GC+ VV E   L GIIT+ D
Sbjct: 106 VGCLPVV-EKGHLVGIITDTD 125


>gi|8778501|gb|AAF79509.1|AC002328_17 F20N2.5 [Arabidopsis thaliana]
          Length = 784

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/168 (20%), Positives = 52/168 (30%), Gaps = 49/168 (29%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T+      +     +   V  G  L +A  IL E    C+ VVD+   L GI+T GDI 
Sbjct: 609 ETILEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIR 668

Query: 274 RNFHKDL--------------------------------NTLSVEDVMIK---------N 292
           R    +                                 NT  V  V  K          
Sbjct: 669 RYLSNNASTILDVSSETKQTPSVSSHLVEPSLSLRLLQENTCPVSSVCTKKISYRGQERG 728

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVD--------DCQKAIGIVHF 332
                 D  + VA +L+    +  L VV           +K +G++H+
Sbjct: 729 LLTCYPDATVGVAKELMEARGVKQLPVVKRGEVIHKGKRRKLLGLLHY 776



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L V  VM KN   +   T L  A  +L++ + + +MVVDD     GI+   D+ R+
Sbjct: 612 LEDLKVMRVMSKNYVKVSSGTTLREARNILKESHQNCIMVVDDDDFLAGILTHGDIRRY 670


>gi|107022802|ref|YP_621129.1| CBS domain-containing protein [Burkholderia cenocepacia AU 1054]
 gi|116686959|ref|YP_840206.1| CBS domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|105892991|gb|ABF76156.1| CBS domain protein [Burkholderia cenocepacia AU 1054]
 gi|116652674|gb|ABK13313.1| CBS domain containing protein [Burkholderia cenocepacia HI2424]
          Length = 141

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/112 (24%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L +A  ++S+   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQSLREAARLMSDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VE V+        ED  ++   + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  AVEGVVSGPANWCYEDDDISAVQKKMENAQIRRVPVVDRQKRLVGIVALGDL 118



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 4   VSEVMTRDAATIGPTQSLREAARLMSDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|269836755|ref|YP_003318983.1| CBS domain-containing protein [Sphaerobacter thermophilus DSM
           20745]
 gi|269786018|gb|ACZ38161.1| CBS domain containing protein [Sphaerobacter thermophilus DSM
           20745]
          Length = 393

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/124 (20%), Positives = 49/124 (39%), Gaps = 5/124 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITE 269
            +L   F           +  +V+    L D +   +  +    + VVD    L GIIT 
Sbjct: 234 MRLERAFSGVRVGTIMDPNPVVVRPEVTLDDLVDRYVLARNVRGLPVVD-NGYLVGIITL 292

Query: 270 GDIFRNFHKDLNTLSVEDVMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            D+     +D   ++V + M        +  D+ LT A++ L   +I  + V+ +    +
Sbjct: 293 TDLREIPREDWGHITVRERMTPRQELITLGPDSELTDALKALSAKDIHQIPVI-EGNTLV 351

Query: 328 GIVH 331
           G++ 
Sbjct: 352 GLLT 355



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFL 333
              +  + + V  +M  NP V+  +  L   + + +   N+  L VVD+    +GI+   
Sbjct: 235 RLERAFSGVRVGTIMDPNPVVVRPEVTLDDLVDRYVLARNVRGLPVVDN-GYLVGIITLT 293

Query: 334 DL 335
           DL
Sbjct: 294 DL 295


>gi|226949842|ref|YP_002804933.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A2 str. Kyoto]
 gi|226841598|gb|ACO84264.1| sensory box sigma-54 dependent transcriptional regulator
           [Clostridium botulinum A2 str. Kyoto]
          Length = 584

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 51/111 (45%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++   +    + +
Sbjct: 15  MKTDFIKVFKNEAISSAFNKMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLESQGKKFSDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E+ + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LENYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNRKIIGIVHLDDL 124


>gi|139436929|ref|ZP_01771089.1| Hypothetical protein COLAER_00062 [Collinsella aerofaciens ATCC
           25986]
 gi|133776576|gb|EBA40396.1| Hypothetical protein COLAER_00062 [Collinsella aerofaciens ATCC
           25986]
          Length = 301

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 72/190 (37%), Gaps = 5/190 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRG-LSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           +++   L    ++    +S+       +S L +++ G         V  +K   G +   
Sbjct: 96  SQRNEGLTDEVSLDNMEQSLKNILAAKVSELNATIDGIDHDTLAAVVHALKHA-GVIEFA 154

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
            +G +  +        +  G        +E S G    +   D+I+++S SG S  L  +
Sbjct: 155 AVGNTNAVALDATFKFSQLGLRCMASTISETSIGFALTLRPGDVIVLISNSGKSRRLNRM 214

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP---ESCPHGLAPTTSAIMQLAIGD 187
              AR     ++ I+S++KS +A  AD             +     +  ++ ++   I +
Sbjct: 215 AKAARNCGATVVVISSDSKSPLARLADYTFNTVNHEALLTTGDFAFSKISATMIIEVIYN 274

Query: 188 ALAIALLESR 197
            L   + ++R
Sbjct: 275 FLLPEIKDAR 284


>gi|289623050|gb|ADD13528.1| transcriptional regulator [Lactobacillus casei]
          Length = 231

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 1/130 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 55  IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 113

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      ++  D +I+ S SG   +  A+   A++  +PLI IT    S +   AD
Sbjct: 114 DYHMQLMAATHLSPRDAMILTSHSGEDKDAIALAELAKKQQVPLIVITGSPTSRLVKMAD 173

Query: 158 IVLTLPKEPE 167
                  E  
Sbjct: 174 AAFVAVAEES 183


>gi|269120129|ref|YP_003308306.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Sebaldella termitidis ATCC 33386]
 gi|268614007|gb|ACZ08375.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Sebaldella termitidis ATCC 33386]
          Length = 383

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 54/123 (43%), Gaps = 7/123 (5%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGC----PLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                    D++ + D +    +      PL + I  + + +   + +VD   KL+G+IT
Sbjct: 237 GKNRIWTVPDLIRAKDIMIKNPVTAGSDEPLCNCIEKMRKSKVDSIFIVDSNDKLEGLIT 296

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
              I        + +   +VM K+   I ED  +   +QL+  +N+S + VVD  Q+  G
Sbjct: 297 ---IRTLNDVHSHNVKASEVMNKSLFTIYEDYSIINLLQLIIDNNLSAIPVVDRRQRLKG 353

Query: 329 IVH 331
           ++ 
Sbjct: 354 LIT 356



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 27/55 (49%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  +D+MIKNP     D  L   ++ +R+  +  + +VD   K  G++    L
Sbjct: 246 DLIRAKDIMIKNPVTAGSDEPLCNCIEKMRKSKVDSIFIVDSNDKLEGLITIRTL 300


>gi|254453578|ref|ZP_05067015.1| CBS domain protein [Octadecabacter antarcticus 238]
 gi|198267984|gb|EDY92254.1| CBS domain protein [Octadecabacter antarcticus 238]
          Length = 145

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 45/108 (41%), Gaps = 5/108 (4%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITEGDIFRNFHKDLNTLS---VEDVMIKN 292
             + DA  I+S+ R G + + D+G     GI++E DI R   K   +     V D+M   
Sbjct: 22  ANVADAAAIMSDMRIGTIVISDDGGATPAGILSERDIVRELGKQGPSCMSRLVSDMMTSK 81

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
                        +  + +     + V+D+  K +G++   D ++  +
Sbjct: 82  LVTCGPSDTTDSVLAKMTEGRFRHMPVIDN-GKMVGLISIGDAVKARL 128


>gi|161505785|ref|YP_001572897.1| hypothetical protein SARI_03961 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160867132|gb|ABX23755.1| hypothetical protein SARI_03961 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 49/144 (34%), Gaps = 1/144 (0%)

Query: 55  CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
             VE+  + + RV+  G G SG    +    +   G  S            L  + RDDL
Sbjct: 128 PVVERFLSAR-RVMFVGFGASGLAALEARDKMNRLGIDSDAFTDRFTMTLKLANLKRDDL 186

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           ++  S SG + E+      A++     +AIT    S +   A+       E         
Sbjct: 187 VVAFSHSGETPEVVNAFRLAQKKGAYTLAITHSPHSPLNELANTFWLTSGEAGPMQGDSI 246

Query: 175 PTTSAIMQLAIGDALAIALLESRN 198
            T  + + +       I     R+
Sbjct: 247 STRISQLFIIEFLCTEITRHNLRD 270


>gi|56478121|ref|YP_159710.1| hypothetical protein ebA4747 [Aromatoleum aromaticum EbN1]
 gi|56314164|emb|CAI08809.1| conserved hypothetical protein [Aromatoleum aromaticum EbN1]
          Length = 152

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G  +  +     + +A+ I++E+  G + VV    ++ G++T  ++ +  HK    
Sbjct: 7   LAIKGKVLYTIAPSRSMAEAVAIMTEQDVGSL-VVFSQGQMTGMLTFREVLQAVHKGGAG 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + VE  M+  P +   D  +    +L+  H+   L V+D     +G+V F D+ + 
Sbjct: 66  WAEMPVEAAMLPGPMIASPDMEMDALRRLMVDHHQRYLPVMD-GNTLMGVVSFHDVAKA 123


>gi|256854813|ref|ZP_05560177.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
 gi|256710373|gb|EEU25417.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T8]
          Length = 295

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F +  SV         + ++  A + + A    LS+    L  EL       +  + + K
Sbjct: 83  FQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDN---VLALMYSAK 139

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G S  +          T     ++         +  +T +D + + S SG +
Sbjct: 140 T-LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKT 198

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            E   +    ++ +  +I +T  + S +A  +D  + +
Sbjct: 199 KESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIV 236


>gi|254513981|ref|ZP_05126042.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           NOR5-3]
 gi|219676224|gb|EED32589.1| inosine-5'-monophosphate dehydrogenase [gamma proteobacterium
           NOR5-3]
          Length = 490

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 55/172 (31%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NLPLVSAAMDTVTEARLAIAMAQEGGIG-----IIHKSMSIADQAAEVLRVKKYESGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               ++    L   I + +      V V+  G+ L GI+T  D+      D     V  +
Sbjct: 96  DPITIQQDATLAQLIELTTANGISGVPVL-AGEDLVGIVTRRDMRFETEMD---KPVASL 151

Query: 289 MIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E        +LL QH I  ++VV D     G++   D  + 
Sbjct: 152 MTPRDKLVTVNEGADSAEVQRLLHQHRIEKILVVGDDFDLRGMITVKDFDKA 203


>gi|154151641|ref|YP_001405259.1| signal transduction protein [Candidatus Methanoregula boonei 6A8]
 gi|154000193|gb|ABS56616.1| putative signal transduction protein with CBS domains
           [Methanoregula boonei 6A8]
          Length = 292

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 3/101 (2%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPKVI 296
            + DA+++  +       V+D    L GI+T  D+ +   + L     +  VM ++    
Sbjct: 189 TIRDAVSLFHKHHIHGAPVLDGEN-LAGIVTMSDVVKVIDQGLPLDTPLPSVMTRDVVQA 247

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             D  L   ++  ++  I  L VV +  K +GI+   D+LR
Sbjct: 248 PSDIKLFDVIRRFKEREIGRL-VVTEDGKPVGILTQSDILR 287



 Score = 44.1 bits (103), Expect = 0.035,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    ++  M    K +     +  A+ L  +H+I    V+D      GIV   D+++
Sbjct: 168 LPKQPIKSYMSTPLKALTVSQTIRDAVSLFHKHHIHGAPVLDGEN-LAGIVTMSDVVK 224


>gi|29377597|ref|NP_816751.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis V583]
 gi|227517250|ref|ZP_03947299.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|227554562|ref|ZP_03984609.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229547433|ref|ZP_04436158.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX1322]
 gi|229548002|ref|ZP_04436727.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
 gi|293385147|ref|ZP_06630973.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|293389120|ref|ZP_06633592.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|294779961|ref|ZP_06745341.1| SIS domain protein [Enterococcus faecalis PC1.1]
 gi|300861590|ref|ZP_07107674.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|307270542|ref|ZP_07551840.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|307273643|ref|ZP_07554871.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|307276636|ref|ZP_07557754.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|307284832|ref|ZP_07564988.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|307288909|ref|ZP_07568882.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|307292160|ref|ZP_07572026.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|312902107|ref|ZP_07761367.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|312905448|ref|ZP_07764562.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|312906669|ref|ZP_07765669.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|312910869|ref|ZP_07769705.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|312953238|ref|ZP_07772084.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|29345064|gb|AAO82821.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis V583]
 gi|227075257|gb|EEI13220.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|227176306|gb|EEI57278.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229306878|gb|EEN72874.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
 gi|229307465|gb|EEN73452.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX1322]
 gi|291077624|gb|EFE14988.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis R712]
 gi|291081588|gb|EFE18551.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Enterococcus faecalis S613]
 gi|294452942|gb|EFG21364.1| SIS domain protein [Enterococcus faecalis PC1.1]
 gi|295114448|emb|CBL33085.1| Transcriptional regulators [Enterococcus sp. 7L76]
 gi|300849051|gb|EFK76804.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|306496813|gb|EFM66364.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|306500181|gb|EFM69525.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|306503091|gb|EFM72348.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|306506746|gb|EFM75898.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|306509656|gb|EFM78698.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|306513123|gb|EFM81757.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|310627317|gb|EFQ10600.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|310628855|gb|EFQ12138.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|310631177|gb|EFQ14460.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|311288892|gb|EFQ67448.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|311290771|gb|EFQ69327.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|315026410|gb|EFT38342.1| SIS domain protein [Enterococcus faecalis TX2137]
 gi|315028334|gb|EFT40266.1| SIS domain protein [Enterococcus faecalis TX4000]
 gi|315031827|gb|EFT43759.1| SIS domain protein [Enterococcus faecalis TX0017]
 gi|315034845|gb|EFT46777.1| SIS domain protein [Enterococcus faecalis TX0027]
 gi|315146562|gb|EFT90578.1| SIS domain protein [Enterococcus faecalis TX4244]
 gi|315150919|gb|EFT94935.1| SIS domain protein [Enterococcus faecalis TX0012]
 gi|315152808|gb|EFT96824.1| SIS domain protein [Enterococcus faecalis TX0031]
 gi|315154728|gb|EFT98744.1| SIS domain protein [Enterococcus faecalis TX0043]
 gi|315159357|gb|EFU03374.1| SIS domain protein [Enterococcus faecalis TX0312]
 gi|315161182|gb|EFU05199.1| SIS domain protein [Enterococcus faecalis TX0645]
 gi|315164435|gb|EFU08452.1| SIS domain protein [Enterococcus faecalis TX1302]
 gi|315167243|gb|EFU11260.1| SIS domain protein [Enterococcus faecalis TX1341]
 gi|315171178|gb|EFU15195.1| SIS domain protein [Enterococcus faecalis TX1342]
 gi|315172982|gb|EFU16999.1| SIS domain protein [Enterococcus faecalis TX1346]
 gi|315573291|gb|EFU85482.1| SIS domain protein [Enterococcus faecalis TX0309B]
 gi|315577098|gb|EFU89289.1| SIS domain protein [Enterococcus faecalis TX0630]
 gi|315581135|gb|EFU93326.1| SIS domain protein [Enterococcus faecalis TX0309A]
 gi|323479071|gb|ADX78510.1| helix-turn-helix domain, rpiR family protein [Enterococcus faecalis
           62]
 gi|327536259|gb|AEA95093.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis OG1RF]
          Length = 295

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F +  SV         + ++  A + + A    LS+    L  EL       +  + + K
Sbjct: 83  FQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDN---VLALMYSAK 139

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G S  +          T     ++         +  +T +D + + S SG +
Sbjct: 140 T-LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKT 198

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            E   +    ++ +  +I +T  + S +A  +D  + +
Sbjct: 199 KESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIV 236


>gi|99082587|ref|YP_614741.1| RpiR family transcriptional regulator [Ruegeria sp. TM1040]
 gi|99038867|gb|ABF65479.1| transcriptional regulator, RpiR family [Ruegeria sp. TM1040]
          Length = 300

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/134 (22%), Positives = 65/134 (48%), Gaps = 4/134 (2%)

Query: 65  GRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           G++V+ G+G  S  +  + A+ +   G P+  +  +         + + D+++++S SG+
Sbjct: 141 GQIVVAGVGGGSTMVAQEAANRMFRLGIPAVSISDSYLLQMRAATLVKGDVLLLVSASGA 200

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +DE+ +    A  +   ++AI +   S +A  A + +      +       PT S    L
Sbjct: 201 ADEIVSAAAIAGGYGATVVAI-ARPGSRLAQEATVAIEADLPEDPDILK--PTASRYAHL 257

Query: 184 AIGDALAIALLESR 197
            I DALA+++ ++R
Sbjct: 258 VIVDALAMSVAQAR 271


>gi|226357623|ref|YP_002787363.1| transcriptional regulator, RpiR family; HTH-type transcriptional
           regulator hexR [Deinococcus deserti VCD115]
 gi|226319614|gb|ACO47609.1| putative transcriptional regulator, RpiR family; putative HTH-type
           transcriptional regulator hexR [Deinococcus deserti
           VCD115]
          Length = 289

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/155 (20%), Positives = 59/155 (38%), Gaps = 3/155 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L  +L+      F  AV  +   +  V + G+G SG +        A  G         
Sbjct: 112 ALRDTLEHLDLEAFSAAVHSVSLSR-HVALIGLGWSGLVAQDGEQRGARLGISCKAYTDP 170

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                   ++   D++I +S+SG+S ++      AR+    ++A+T   +S +A  A   
Sbjct: 171 SMFLQASSLLEPTDVLIAVSFSGASADIVRAARLARQTGATVVALTGLGRSALARTAHHT 230

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           LT     +     +        QL + DAL  +  
Sbjct: 231 LTSSAPGDMYRPEVL--NVRFAQLCLLDALFTSFH 263


>gi|224066373|ref|XP_002188184.1| PREDICTED: inosine monophosphate dehydrogenase 2 [Taeniopygia
           guttata]
          Length = 514

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 63/178 (35%), Gaps = 23/178 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M      ++AIA+           N +   F                     
Sbjct: 62  KTPLVSSPMDTVTEASMAIAMALTGGIGFIHHNCTPE-FQANE--------VRKVKKYEQ 112

Query: 226 SGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
              + P+V      + D     +   F  + + D G    KL GII+  DI     +  +
Sbjct: 113 GFITDPVVLSPNDRVRDVFEAKARHGFCGIPITDNGKMGGKLVGIISSRDI-DFLKESEH 171

Query: 282 TLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + ++M K  +  V     +L  A ++L++     L +V++  + + I+   DL +
Sbjct: 172 DLPLGEIMTKREDLVVAPAGVMLKEANEILQRSKKGKLPIVNEDDELVAIIARTDLKK 229


>gi|159904298|ref|YP_001551642.1| Mg2+ transporter [Prochlorococcus marinus str. MIT 9211]
 gi|159889474|gb|ABX09688.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus str. MIT 9211]
          Length = 471

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/130 (23%), Positives = 53/130 (40%), Gaps = 13/130 (10%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSI-PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
              G+L T         HS      +V+   P  + I  L         V D  + L GI
Sbjct: 148 ETAGRLMTNECIDLKEFHSAAQALTIVRRQAPFTETIYSLY--------VTDRERHLTGI 199

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           ++  D+     + L    + DVM K+   +  DT      + +++++   L VVD  ++ 
Sbjct: 200 LSLRDLVTADPEAL----IGDVMTKDVVNVRTDTDQEEVARAIQRYDFLALPVVDSEKRL 255

Query: 327 IGIVHFLDLL 336
           +GIV   D++
Sbjct: 256 VGIVTVDDVI 265


>gi|319940390|ref|ZP_08014740.1| RpiR family Phosphosugar-binding transcriptional regulator
           [Streptococcus anginosus 1_2_62CV]
 gi|319810446|gb|EFW06788.1| RpiR family Phosphosugar-binding transcriptional regulator
           [Streptococcus anginosus 1_2_62CV]
          Length = 281

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/196 (18%), Positives = 67/196 (34%), Gaps = 8/196 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             + R +    +     E  +  E   +    V+ I+    RV   GIG SG +   +  
Sbjct: 91  DVSRRVLRNYTQIRQQTEELIDEE---KLLRVVQFIEEAD-RVYFFGIGSSGLVARDMKL 146

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
                G     +   +       ++ ++ L+I  S SG +  +   L  A+      + +
Sbjct: 147 RFMRLGVICEALTDQDGFAWTTSILDKNCLVIGFSLSGQTQSIINSLMDAKAMGAKTVLV 206

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL-AIALLESRNFSEND 203
           T ++  V     +I   +P   +S P  +   ++    L + D L A  L   R   E  
Sbjct: 207 TGQSDKVDQQFTEI---IPVAIQSKPEYILRISAQFSMLLVIDLLYAFFLEIDREKKEKI 263

Query: 204 FYVLHPGGKLGTLFVC 219
           F       KL   +  
Sbjct: 264 FNSYWENKKLNGYYQR 279


>gi|288559922|ref|YP_003423408.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288542632|gb|ADC46516.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 291

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 7/122 (5%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHK 278
             DV  +      V       +A+ I+ ++    V V+  E  KL GI+T  D       
Sbjct: 3   VKDVASTDVIHVTVPG--SRDEALRIMKKEDVSVVPVIKKETGKLVGILTRSD----MIT 56

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + +   +  +M +N      D  L+   + +  ++I  + V++D  + +GIV   D++  
Sbjct: 57  NPDEEQIAMLMTRNLITAKMDDELSTVAEKMVTNDIRRVPVINDDDELVGIVTSFDIVSL 116

Query: 339 GI 340
            I
Sbjct: 117 AI 118



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 33/139 (23%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----------------- 278
             PL  A  ++       V  ++   K+ GI+TE D                        
Sbjct: 141 ETPLNVAFEVMKFFGLKSVIGLNSNNKMTGILTETDFIAESEIISERTEHSSSVGTEGDK 200

Query: 279 -DLNTLSV---------------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
              ++ SV               +DV   +       T ++V  + ++  ++  L V+  
Sbjct: 201 WSWDSTSVLYIEKNHLKFTDKVFKDVASGDVVTANTKTKVSVCTEKMKSLDVEQLPVLGI 260

Query: 323 CQKAIGIVHFLDLLRFGII 341
             + +G+V   DL++  II
Sbjct: 261 EGELVGLVRASDLIKSFII 279


>gi|259047727|ref|ZP_05738128.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
 gi|259035918|gb|EEW37173.1| phosphosugar-binding transcriptional regulator [Granulicatella
           adiacens ATCC 49175]
          Length = 267

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 1/118 (0%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
                  ++ +K  + ++   G+G SG + S L   L+  G    +   +      LG  
Sbjct: 103 DIVLDKVIDLMKNAR-KIYTFGVGASGMVCSDLYFKLSRIGKNILYHTDSHIQLASLGSA 161

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
           T DDL+I +S+S  + E+ +    A    IP ++IT+   + +   +   L +P+   
Sbjct: 162 TPDDLVIGVSYSAQTKEVTSAFEIAHSREIPTVSITALGNNQLDSLSTYSLKVPRHEN 219


>gi|254560089|ref|YP_003067184.1| metallopeptidase [Methylobacterium extorquens DM4]
 gi|254267367|emb|CAX23202.1| putative metallopeptidase, CBS (cystathionine-beta-synthase)domain
           [Methylobacterium extorquens DM4]
          Length = 372

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 45/98 (45%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           + G  + DA+  L         VVD    L+G++T  D+ R         SV +VM  + 
Sbjct: 246 RPGSQVEDAVQCLITTTQHEFPVVDGMGHLRGVLTRDDMIRALRDRGPETSVMEVMRSDI 305

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V+ +   L  A++L+++  +  + V D   + +G++ 
Sbjct: 306 PVVRDRQPLEGALRLMQEKRLPAIGVTDASGRLVGLIT 343



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 22/54 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             DVMI   + +   + +  A+Q L         VVD      G++   D++R 
Sbjct: 234 AADVMITRFESLRPGSQVEDAVQCLITTTQHEFPVVDGMGHLRGVLTRDDMIRA 287



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           S +      IP+V+   PL  A+ ++ EKR   + V D   +L G+IT
Sbjct: 296 SVMEVMRSDIPVVRDRQPLEGALRLMQEKRLPAIGVTDASGRLVGLIT 343


>gi|188582979|ref|YP_001926424.1| peptidase M50 [Methylobacterium populi BJ001]
 gi|179346477|gb|ACB81889.1| peptidase M50 [Methylobacterium populi BJ001]
          Length = 372

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 23/98 (23%), Positives = 45/98 (45%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           + G  + DA+  L         VVD    L+G++T  D+ R         SV +VM  + 
Sbjct: 246 RPGSQVEDAVQCLITTTQHEFPVVDGMGHLRGVLTRDDMIRALRDRGPETSVMEVMRSDI 305

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            V+ +   L  A++L+++  +  + V D   + +G++ 
Sbjct: 306 PVVRDRQPLEGALRLMQEKRLPAIGVTDASGRLVGLIT 343



 Score = 39.5 bits (91), Expect = 0.74,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 25/63 (39%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + L  L   DVMI   + +   + +  A+Q L         VVD      G++   D+
Sbjct: 225 MRQVLRGLLAADVMITRFESLRPGSQVEDAVQCLITTTQHEFPVVDGMGHLRGVLTRDDM 284

Query: 336 LRF 338
           +R 
Sbjct: 285 IRA 287



 Score = 38.3 bits (88), Expect = 1.8,   Method: Composition-based stats.
 Identities = 16/48 (33%), Positives = 25/48 (52%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           S +      IP+V+   PL  A+ ++ EKR   + V D   +L G+IT
Sbjct: 296 SVMEVMRSDIPVVRDRQPLEGALRLMQEKRLPAIGVTDASGRLVGLIT 343


>gi|221134213|ref|ZP_03560518.1| DNA-binding transcriptional regulator HexR [Glaciecola sp.
           HTCC2999]
          Length = 281

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/161 (18%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++L+ + Q       +  V+ +   + ++   G+G S  +     +       P  +  
Sbjct: 103 MAALDIAKQSVDINTINRVVDLLTQAR-KISFFGLGSSASVAHDALNKFFRFNVPVVYFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                          D+I+++S +G +  L  I   AR     ++ IT++  S +    +
Sbjct: 162 DIVMQRMSTMNSGDGDVIVLISHTGRTKSLVEIAQIARANDATVVGITAK-DSPLGRECN 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            VL+L    ++  +   P  S I QL + D LA      R 
Sbjct: 221 YVLSLDVPEDTDMY--MPMASRIAQLTLIDILATGFTLRRG 259


>gi|126435086|ref|YP_001070777.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
 gi|126234886|gb|ABN98286.1| cyclic nucleotide-binding protein [Mycobacterium sp. JLS]
          Length = 607

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V     + +A+T ++  R     +        GI T+ D+  R     L   + +  VM 
Sbjct: 160 VDPHTTVREAVTQMTRHRVSYALIRLPDGGF-GIFTDRDLRTRVVAAGLPVDVEINRVMS 218

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +  D      +  + +  +  + V+      +G++   DLL  
Sbjct: 219 APARTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDADLLAA 266


>gi|108799432|ref|YP_639629.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
 gi|119868545|ref|YP_938497.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
 gi|108769851|gb|ABG08573.1| cyclic nucleotide-binding protein [Mycobacterium sp. MCS]
 gi|119694634|gb|ABL91707.1| cyclic nucleotide-binding protein [Mycobacterium sp. KMS]
          Length = 607

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 18/108 (16%), Positives = 39/108 (36%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLSVEDVMI 290
           V     + +A+T ++  R     +        GI T+ D+  R     L   + +  VM 
Sbjct: 160 VDPHTTVREAVTQMTRHRVSYALIRLPDGGF-GIFTDRDLRTRVVAAGLPVDVEINRVMS 218

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + +  D      +  + +  +  + V+      +G++   DLL  
Sbjct: 219 APARTVTADLTAETVLMEMLESGVRHMPVLTGRGDVVGVLEDADLLAA 266


>gi|2911050|emb|CAA17560.1| putative protein [Arabidopsis thaliana]
 gi|7270361|emb|CAB80129.1| putative protein [Arabidopsis thaliana]
          Length = 249

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/174 (20%), Positives = 56/174 (32%), Gaps = 56/174 (32%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI-- 266
           P    G       D M    ++ +VK    + DA+ +L EK+   + V+D+   L G+  
Sbjct: 71  PAKNGG---YTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVS 127

Query: 267 -----------------------------------------ITEGDIFRNFHKDLNTLS- 284
                                                     T   +  +F +  N L  
Sbjct: 128 DYDLLALDSISVKMIQTCSLMSTVPGKTIVCFICMNFLGMRFTYIMLEFSFGQTFNELQK 187

Query: 285 ---------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                    V D+M  +P V+ + T L  A +LL +     L VVD   K + I
Sbjct: 188 LISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLVSI 241



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 284 SVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V D M    N  V+   T +  A++LL +  ++ L V+DD    +G+V   DLL
Sbjct: 78  TVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDNWTLVGVVSDYDLL 132


>gi|83309191|ref|YP_419455.1| sialic acid synthase [Magnetospirillum magneticum AMB-1]
 gi|82944032|dbj|BAE48896.1| Sialic acid synthase [Magnetospirillum magneticum AMB-1]
          Length = 748

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/115 (21%), Positives = 49/115 (42%), Gaps = 12/115 (10%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDL 280
            ++    +  LV     L +A+  +++ +   V  VDE  +L+G++T+GD+ R     D 
Sbjct: 1   MIIDKNIAKYLVFSEDTLKNALVKINDNKERVVFAVDETGRLEGVLTDGDVRRWLVAADP 60

Query: 281 NTLSVEDVMIKNPKVILEDTLLT------VAMQLLRQHNISVLMVVDDCQKAIGI 329
             L +        KV   D           A++ +    I+ + +VDD    +G+
Sbjct: 61  VDLGIAA-----GKVANGDFRSARLGGDRHAIEAMLDSRINFVPLVDDYGHLVGV 110


>gi|322370853|ref|ZP_08045408.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Haladaptatus paucihalophilus DX253]
 gi|320549530|gb|EFW91189.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Haladaptatus paucihalophilus DX253]
          Length = 604

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 3/127 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V     G S H        L  TG  +    A+E      G IT + L+I ++ SG + +
Sbjct: 293 VQFVACGTSYHAALYGQQLLNQTGIRAQAFRASEYVDSATGSITENTLVIAVTQSGETAD 352

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
               L  A+      + +T+   S  A  AD  L +   PE    G+A T +   Q  + 
Sbjct: 353 TLGALRGAKERGARTVTVTNVMGSTAAREADDALFIRAGPE---IGVAATKTFSSQAVML 409

Query: 187 DALAIAL 193
             L++ L
Sbjct: 410 SLLSLRL 416



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 21/136 (15%), Positives = 40/136 (29%), Gaps = 2/136 (1%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS-TGTPSF 94
           R L  L   +Q  L       +             G G +  +  + A      T   + 
Sbjct: 434 RELQKLPEYVQTVLDSTAAKRIASRYTGSEAFFFIGRGLNNAVAKEGALKFKEITYEHAE 493

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
              + E  HG L ++T D  +  L       +       A+    P++++ +        
Sbjct: 494 GFASGELKHGPLALVTPDTPVFALFNGDKDRKTLQNAEEAQARGAPIVSV-AHADHPAEK 552

Query: 155 HADIVLTLPKEPESCP 170
            +D  L +P       
Sbjct: 553 ISDDFLEIPNTHSMWS 568


>gi|28872620|ref|NP_795239.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|28855876|gb|AAO58934.1| transcriptional regulator, RpiR family [Pseudomonas syringae pv.
           tomato str. DC3000]
 gi|331017796|gb|EGH97852.1| transcriptional regulator, RpiR family protein [Pseudomonas
           syringae pv. lachrymans str. M302278PT]
          Length = 288

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQQAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|77463519|ref|YP_353023.1| CBS domain-containing proteins [Rhodobacter sphaeroides 2.4.1]
 gi|332558399|ref|ZP_08412721.1| CBS domain-containing protein [Rhodobacter sphaeroides WS8N]
 gi|77387937|gb|ABA79122.1| Protein containing a CBS domain [Rhodobacter sphaeroides 2.4.1]
 gi|332276111|gb|EGJ21426.1| CBS domain-containing protein [Rhodobacter sphaeroides WS8N]
          Length = 144

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
            S D +  V  G  +  A  +LS +R G V V  +G++ +G+++E DI R   +      
Sbjct: 10  KSDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSRDGKRPEGMLSERDIVRELGRRGAGCL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  VE +M                MQ++ +     L V+    + +G++   D+++  +
Sbjct: 70  SDKVEAIMTSKIVTCACTDEADRIMQVMTEGRFRHLPVM-AEGEMVGLISIGDVVKARL 127


>gi|116496197|ref|YP_807931.1| transcriptional regulator [Lactobacillus casei ATCC 334]
 gi|227532814|ref|ZP_03962863.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|301067798|ref|YP_003789821.1| transcriptional regulator [Lactobacillus casei str. Zhang]
 gi|116106347|gb|ABJ71489.1| transcriptional regulator, RpiR family [Lactobacillus casei ATCC
           334]
 gi|227189555|gb|EEI69622.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           ATCC 25302]
 gi|300440205|gb|ADK19971.1| Transcriptional regulator [Lactobacillus casei str. Zhang]
          Length = 310

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++++              A+  ++  +  + + G+  S  +   L   L   G  + F 
Sbjct: 105 AIAAVRDLPDELDQSAVQSAITTLRQAR-HIYLVGVSASALVAQDLYLKLIRAGYVAIFD 163

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H    +       T  D ++V S+SG + E+      ARR   P+IA+T    S +   A
Sbjct: 164 HDTHTAVERAYYTTPADAMVVFSYSGLTKEVVLAAQQARRNQTPVIAVTRHEPSPLREAA 223

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             V+ LP  P      +   TS   +  + + L + +++
Sbjct: 224 SCVIALP--PTEPLLRIGAVTSMFTETYVANILFLGVVQ 260


>gi|282164424|ref|YP_003356809.1| hypothetical protein MCP_1754 [Methanocella paludicola SANAE]
 gi|282156738|dbj|BAI61826.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 159

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 30/146 (20%), Positives = 55/146 (37%), Gaps = 37/146 (25%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +   +   P+   + ++SEK    + VVD G+K+ G++TE DI R           
Sbjct: 7   MTKDVITCRPSDPVDGVVKLMSEKDISGLPVVD-GEKVVGMVTEADIMRLLVVPEPSRTL 65

Query: 278 ---------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                                      KD    +V  +M K+   I  D  +  A   + 
Sbjct: 66  WMPSPLEVLIEIPLKEIIQLRRLQQSVKDAGGQNVGSIMQKDVLSISPDDDIEDAASAMV 125

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
           +H ++ L+V+    K +GI+   D++
Sbjct: 126 KHKVNRLVVL-KDGKLVGIITRDDII 150



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 1/59 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + V +VM K+         +   ++L+ + +IS L VVD  +K +G+V   D++R  ++
Sbjct: 1   MKVSEVMTKDVITCRPSDPVDGVVKLMSEKDISGLPVVD-GEKVVGMVTEADIMRLLVV 58


>gi|257483519|ref|ZP_05637560.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|330984719|gb|EGH82822.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331009601|gb|EGH89657.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 286

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 62/166 (37%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    +F  AV  +   +  +   G+G  S     +L + L   G P     
Sbjct: 102 ATLHQHLAGFDESRFAAAVACLSDAR-MIHAFGMGGCSSLCSEELQTRLVRLGYPVAACR 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 161 DPVMMRMIAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 260


>gi|254515179|ref|ZP_05127240.1| CBS domains protein [gamma proteobacterium NOR5-3]
 gi|219677422|gb|EED33787.1| CBS domains protein [gamma proteobacterium NOR5-3]
          Length = 147

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LSV +VM   P  +  D  L  A  L+R+H+I  + +V +    IGIV   DLL  
Sbjct: 2   LSVAEVMTAQPYTLGPDDSLVKAAALMREHHIRHIPIVSNDGNVIGIVSHRDLLAA 57



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 12/118 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL------NTL 283
               L+ A  ++ E     + +V     + GI++  D+      R  H+DL      N +
Sbjct: 17  PDDSLVKAAALMREHHIRHIPIVSNDGNVIGIVSHRDLLAASDSRLVHEDLLASGKENYV 76

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           ++  VM    + + E   L     +LR   +  + V  + Q  +GI+   D L   I+
Sbjct: 77  ALSSVMSSPVQCVNEAAELRSVAGMLRNQRLGCMPVTRNDQ-LVGIITDSDFLEVAIV 133


>gi|251798463|ref|YP_003013194.1| signal transduction protein with CBS and DRTGG domains
           [Paenibacillus sp. JDR-2]
 gi|247546089|gb|ACT03108.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus sp. JDR-2]
          Length = 445

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 39/214 (18%), Positives = 81/214 (37%), Gaps = 14/214 (6%)

Query: 126 ELKAILYYARRFSIPLIAITSENKS-VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           EL A+L Y    S+ ++          +   A +++T   EP      LA      +  +
Sbjct: 113 ELDAMLRYIDEGSLLIVGNRGGAHRCALEQGAGVLITGGFEPSEEVKALANENGLPIISS 172

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D   +A + +R   +           +    +   D+M       +++ G  L+D   
Sbjct: 173 RHDTFTVASMINRAMYD---------RLIKRKIMLIEDLMTFSRPADVLRSGNTLLDFHK 223

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
           +  E       V+D+  ++ G++T  D         +   ++ +M ++P     +  +T 
Sbjct: 224 LSRETGNYRFPVIDDRGRVVGMMTSKD----ATGSSDDSPIDKLMTRHPITAAPNIAVTS 279

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A   +    I +L +VD  +K +G+V    LL  
Sbjct: 280 AAHTMAAEGIDLLPIVDRHRKLLGVVTRQQLLDA 313


>gi|116071650|ref|ZP_01468918.1| nucleoside-diphosphate-sugar pyrophosphorylase [Synechococcus sp.
           BL107]
 gi|116065273|gb|EAU71031.1| nucleoside-diphosphate-sugar pyrophosphorylase [Synechococcus sp.
           BL107]
          Length = 350

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 20/98 (20%), Positives = 44/98 (44%), Gaps = 3/98 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +     +I+A+ ++         V+   Q+L G +T+GDI R   H       V+D+M +
Sbjct: 10  IDQDTKVIEAMRVIEHGGAQIALVIGRKQQLLGTLTDGDIRRGILHGKKLESPVKDLMNR 69

Query: 292 NPKVILEDTLL--TVAMQLLRQHNISVLMVVDDCQKAI 327
           N +     T       +++++++ +  L V+D     +
Sbjct: 70  NFQSAKYSTTANRQEMIKMMKKNFLRHLPVIDKNGNVV 107


>gi|302035544|ref|YP_003795866.1| hypothetical protein NIDE0155 [Candidatus Nitrospira defluvii]
 gi|300603608|emb|CBK39939.1| conserved protein of unknown function, containing CBS domain pair
           [Candidatus Nitrospira defluvii]
          Length = 162

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 49/127 (38%), Gaps = 24/127 (18%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------------- 272
           +    +   +T +  +  G + VV++G+ L G++T  D+                     
Sbjct: 15  RRNESVRSVVTKMLSRHCGAIPVVEDGELLIGMVTLRDVLIPLYPNYGEYIHDNVHSRDF 74

Query: 273 --FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 + D+ T  VE+VM  NP  +   T +  A   +   N   + VV+     +G+V
Sbjct: 75  VEMEEGYADVLTQRVEEVMSLNPLTVTPRTPVLEAASYMGLKNFRRIPVVEK-GTLVGMV 133

Query: 331 HFLDLLR 337
              D+ R
Sbjct: 134 SVGDINR 140



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 23/52 (44%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V+DVM         +  +   +  +   +   + VV+D +  IG+V   D+L
Sbjct: 3   VQDVMSTGVVTARRNESVRSVVTKMLSRHCGAIPVVEDGELLIGMVTLRDVL 54



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 21/79 (26%), Positives = 33/79 (41%), Gaps = 4/79 (5%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N    DF  +   G    L     +VM    +   V    P+++A + +  K F  + VV
Sbjct: 68  NVHSRDFVEMEE-GYADVLTQRVEEVM--SLNPLTVTPRTPVLEAASYMGLKNFRRIPVV 124

Query: 258 DEGQKLKGIITEGDIFRNF 276
            E   L G+++ GDI R  
Sbjct: 125 -EKGTLVGMVSVGDINRGL 142


>gi|296110675|ref|YP_003621056.1| transcription regulator [Leuconostoc kimchii IMSNU 11154]
 gi|295832206|gb|ADG40087.1| transcription regulator [Leuconostoc kimchii IMSNU 11154]
          Length = 283

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/150 (23%), Positives = 55/150 (36%), Gaps = 3/150 (2%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L +++    +     A   + A K RV   GIG S  +          T          
Sbjct: 108 ALNATVNNLTADSLDKASHYLIAAK-RVGFFGIGGSSLVAFNAYHKFLRTPLDVIAHPDY 166

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           +        +   D  +V+S SG + +   I    +   + +IAITS   S +A  AD+V
Sbjct: 167 DIQLMQAVKLNNHDTAVVISHSGRNKDTLLIAQKLKENGVKIIAITSFADSPLAKIADLV 226

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           L      E         +S I Q+ I D L
Sbjct: 227 LL--SLAEEINFRSESMSSLIAQITIIDTL 254


>gi|227817073|ref|YP_002817082.1| CBS domain protein [Bacillus anthracis str. CDC 684]
 gi|227005321|gb|ACP15064.1| CBS domain protein [Bacillus anthracis str. CDC 684]
          Length = 210

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    GG+L +  V    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 61  FYTGKTGGQLLSEAVKKIKVQDYQSRPVVIDKNVSVYDAICTMFLEDVGTLFVVDQSTLL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     +DL +L V  +M + P       ED+L  + M+L+    I  + 
Sbjct: 121 VGVVSRKDLLRASLGKQDLTSLPVNIIMTRMPNIAMCRREDSLYDIVMELIE-RQIDAMP 179

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV D ++    IG +   ++ R 
Sbjct: 180 VVKDTKQGLEVIGRITKTNITRA 202


>gi|146303021|ref|YP_001190337.1| hexulose-6-phosphate isomerase [Metallosphaera sedula DSM 5348]
 gi|145701271|gb|ABP94413.1| 3-hexulose-6-phosphate isomerase [Metallosphaera sedula DSM 5348]
          Length = 209

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 65/177 (36%), Gaps = 24/177 (13%)

Query: 51  FQFHCAVEKIK----AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
            Q    V+ +        G+V++ G G+SG +G   A  L   G  ++ +          
Sbjct: 33  DQTEKMVDTLARFYENKGGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVLGETIVP---- 88

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             I  +DL I +S SG +  +      A+     L+A+TS   S +   AD+V+ +P   
Sbjct: 89  -AIRENDLAIAISGSGRTKLIVTAAEAAKDAKATLVALTSYYDSPLGRIADVVVEIPGRT 147

Query: 167 ESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           +   +              LAP  +          D +   L+     +E D   +H
Sbjct: 148 KYSQNEDYFARQILGITEPLAPLGTLFEDTTQVFLDGIVAELMMRLKKTEEDLRRVH 204


>gi|315144126|gb|EFT88142.1| SIS domain protein [Enterococcus faecalis TX2141]
          Length = 295

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/198 (17%), Positives = 68/198 (34%), Gaps = 7/198 (3%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F +  SV         + ++  A + + A    LS+    L  EL       +  + + K
Sbjct: 83  FQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDN---VLALMYSAK 139

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G S  +          T     ++         +  +T +D + + S SG +
Sbjct: 140 T-LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKT 198

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E   +    ++ +  +I +T  + S +A  +D  +      E          S I  L 
Sbjct: 199 KESINLARQVKKTNAKMITLTGNSGSELAGLSDEAII--VVTEEGLFRAESLASRISYLT 256

Query: 185 IGDALAIALLESRNFSEN 202
           + D L    +   NF +N
Sbjct: 257 VMDILYTNTMHH-NFDQN 273


>gi|312136465|ref|YP_004003802.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|311224184|gb|ADP77040.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 273

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/133 (21%), Positives = 53/133 (39%), Gaps = 22/133 (16%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---------FRNFH 277
            ++  +     P+      ++E  +  + V+ +  KL GIIT  DI           +  
Sbjct: 140 TENPVVCDYEDPIYKVWDKMNESGYSGLPVL-KNGKLIGIITRKDIIDSGYVRINRESKK 198

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK------------ 325
                + V  VM   P  + ++  +  AM+L+ + +I  L VV++ +             
Sbjct: 199 HVRKNIEVYRVMKTPPVAVTKEDDVYDAMKLMIEKDIGRLPVVENPEYINNESYVVRRAD 258

Query: 326 AIGIVHFLDLLRF 338
            IGIV   D+L+ 
Sbjct: 259 LIGIVTRKDILKA 271



 Score = 63.0 bits (152), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 52/121 (42%), Gaps = 6/121 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITIL-SEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDL--- 280
                 L+     ++DA+  L S K+   + + D    +L GI++  DIF++F       
Sbjct: 71  MEKPTVLLTPDADVMDAVKRLVSAKKTHALIIKDSTSMELIGIVSVFDIFQSFLDAKIRP 130

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               ++D+  +NP V   +  +      + +   S L V+    K IGI+   D++  G 
Sbjct: 131 KKEKIKDIFTENPVVCDYEDPIYKVWDKMNESGYSGLPVL-KNGKLIGIITRKDIIDSGY 189

Query: 341 I 341
           +
Sbjct: 190 V 190



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +N + ++++M  NP V+  D   T    L R+  +    VV +  K  G++   D+LR 
Sbjct: 1   MNKVKIKEIMTTNPIVVSPDMAATKVRSLFREERVRCFPVV-NNGKLEGVITRGDVLRI 58



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 52/123 (42%), Gaps = 4/123 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                       +  +V          ++  E+R  C  VV+   KL+G+IT GD+ R  
Sbjct: 1   MNKVKIKEIMTTNPIVVSPDMAATKVRSLFREERVRCFPVVN-NGKLEGVITRGDVLR-I 58

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLD 334
               + ++V+ +M K   ++  D  +  A++ L     +  +++ D    + IGIV   D
Sbjct: 59  TSTRSNITVKGLMEKPTVLLTPDADVMDAVKRLVSAKKTHALIIKDSTSMELIGIVSVFD 118

Query: 335 LLR 337
           + +
Sbjct: 119 IFQ 121


>gi|229552854|ref|ZP_04441579.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|258540535|ref|YP_003175034.1| CBS domain-containing protein [Lactobacillus rhamnosus Lc 705]
 gi|229313836|gb|EEN79809.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|257152211|emb|CAR91183.1| CBS domain protein [Lactobacillus rhamnosus Lc 705]
          Length = 185

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R    D + TL    VM +
Sbjct: 68  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 127

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L V+        IG + 
Sbjct: 128 MPNVVTVTADTTIMAASKLLLKHNVDSLPVIQKHGDTHVIGKIT 171



 Score = 36.8 bits (84), Expect = 4.7,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 65  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 110


>gi|213968511|ref|ZP_03396654.1| transcriptional regulator, RpiR family [Pseudomonas syringae pv.
           tomato T1]
 gi|301384753|ref|ZP_07233171.1| transcriptional regulator, RpiR family protein [Pseudomonas
           syringae pv. tomato Max13]
 gi|302062458|ref|ZP_07253999.1| transcriptional regulator, RpiR family protein [Pseudomonas
           syringae pv. tomato K40]
 gi|302133169|ref|ZP_07259159.1| transcriptional regulator, RpiR family protein [Pseudomonas
           syringae pv. tomato NCPPB 1108]
 gi|213926799|gb|EEB60351.1| transcriptional regulator, RpiR family [Pseudomonas syringae pv.
           tomato T1]
          Length = 288

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQQAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|297202261|ref|ZP_06919658.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
 gi|197710222|gb|EDY54256.1| signal-transduction protein [Streptomyces sviceus ATCC 29083]
          Length = 136

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE DI  +    ++ +T        
Sbjct: 14  IGPAHTLRQAAALMSARRVGAAVVLDPDGTGIGILTERDILNSVGLGQNPDTEHAHAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A Q +       L+V+D   +  GIV   D++R
Sbjct: 74  TDVVFATPTWTLEEAAQAMAHGGFRHLIVLDH-GEPTGIVSVRDIIR 119



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A  L+    +   +V+D     IGI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAAALMSARRVGAAVVLDPDGTGIGILTERDIL 54


>gi|86131214|ref|ZP_01049813.1| CBS domain protein [Dokdonia donghaensis MED134]
 gi|85818625|gb|EAQ39785.1| CBS domain protein [Dokdonia donghaensis MED134]
          Length = 154

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 7/113 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
                +++ +  L + +     VV+E  +L GII+EGD        R ++  ++ + V +
Sbjct: 35  SPDQSVLEVMNSLIKHKISGGPVVNEQNELLGIISEGDCMKQISESRYYNMPMDNMKVSN 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            M+ N   I  +  +  A     +       +V +  K +G +   D+L+  +
Sbjct: 95  HMVSNVDTIDGNMNVFDAANKFLESKHRRFPIV-ENGKLVGQISQKDVLKAAL 146



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 27/68 (39%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G   +        + V D M +       D  +   M  L +H IS   VV++  + +GI
Sbjct: 8   GKRAKEVKSTATDIKVSDYMSRKLITFSPDQSVLEVMNSLIKHKISGGPVVNEQNELLGI 67

Query: 330 VHFLDLLR 337
           +   D ++
Sbjct: 68  ISEGDCMK 75


>gi|300718842|ref|YP_003743645.1| transcriptional regulator [Erwinia billingiae Eb661]
 gi|299064678|emb|CAX61798.1| Putative transcriptional regulator [Erwinia billingiae Eb661]
          Length = 280

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AVE +   +  + + G+ +S  + S L   L      +F
Sbjct: 123 SQALQQLAMQTNPE---QLDKAVEMLHQAEN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +    LIAIT    S +A
Sbjct: 179 LIDGLGGMFTEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAHLIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|218201391|gb|EEC83818.1| hypothetical protein OsI_29755 [Oryza sativa Indica Group]
          Length = 749

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 34/141 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + +A  ++ +K+  CV VVD    L+GI+T GDI R   +       
Sbjct: 578 MSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKGFESELSEDT 637

Query: 279 ----------DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMV 319
                     D N+  V   + +                DT L+ A  L+    I  L V
Sbjct: 638 PRNGANSSTLDANSSLVSSCLTRGFQYHGNERGLVTCFPDTDLSTAKVLMEVKGIKQLPV 697

Query: 320 V--------DDCQKAIGIVHF 332
           V        D  +K +G++H+
Sbjct: 698 VKRRAGRRNDGRRKVLGLLHY 718



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K    +     +  A +L+     + ++VVD      GIV   D+ R G
Sbjct: 569 LDDLKVSQAMSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKG 628


>gi|197123502|ref|YP_002135453.1| signal-transduction protein with CBS domains [Anaeromyxobacter sp.
           K]
 gi|196173351|gb|ACG74324.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter sp. K]
          Length = 139

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
             H    +  ++   P+ +A  ++SE++ G VAV D G ++ G++TE D+          
Sbjct: 5   HKHVTREMVSLEATAPIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGGD 63

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + + M +    +           L+R H    L+V ++  + +G+V   D+++ 
Sbjct: 64  ANHPMREAMRQGLPRVSSSATEVEVAGLMRDHTTRHLLV-EEGGQVVGVVSMRDIIQL 120


>gi|301062296|ref|ZP_07202962.1| CBS domain protein [delta proteobacterium NaphS2]
 gi|300443596|gb|EFK07695.1| CBS domain protein [delta proteobacterium NaphS2]
          Length = 149

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 6/102 (5%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----LNTLSVEDVMIKNP 293
            L DA+  ++E+    + V+D G+K  GIITE DI R++ K     L+ + V+DVM +  
Sbjct: 22  TLKDAVLTMTEQNQSALIVMD-GRKTVGIITERDILRSYVKHGDLPLSKIQVKDVMTEKL 80

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V   D  + V + L+RQ  I  L V+ +  + I +++  DL
Sbjct: 81  IVAKSDDEIDVTISLMRQAGIRHLPVL-EAGEIISLLNICDL 121


>gi|300904720|ref|ZP_07122552.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
 gi|300403348|gb|EFJ86886.1| transcriptional regulator, RpiR family [Escherichia coli MS 84-1]
          Length = 289

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 35/204 (17%), Positives = 74/204 (36%), Gaps = 8/204 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQC-ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           +H   S          ++ ++ +V+    +   +    L  +  SL        + AV+ 
Sbjct: 68  LHLAQSLANGTPYVNRNVNEDDSVESYTGKIFESAMATLDHVRHSLDKS---AINRAVDL 124

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +   K ++   G+G S  +     +       P  +              +  D+++++S
Sbjct: 125 LTQAK-KIAFFGLGSSAAVAHDAMNKFFRFNVPVVYSDDIVLQRMSCMNCSDGDVVVLIS 183

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  L  +   AR     +IA+ S   + +A  A + +TL    ++  +   P  S 
Sbjct: 184 HTGRTKNLVELAQLARENDAMVIALPS-AGTPLAREATLAITLDVPEDTDIY--MPMVSR 240

Query: 180 IMQLAIGDALAIALLESRNFSEND 203
           + QL + D LA      R     D
Sbjct: 241 LAQLTVIDVLATGFTLRRGAKFRD 264


>gi|268316463|ref|YP_003290182.1| CBS domain containing protein [Rhodothermus marinus DSM 4252]
 gi|262333997|gb|ACY47794.1| CBS domain containing protein [Rhodothermus marinus DSM 4252]
          Length = 619

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 49/117 (41%), Gaps = 3/117 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   VM +      V+   PL     ++  K+   V V D   +  G++    + +
Sbjct: 499 QGNRRVEHVMTTDLFT--VQEDEPLQFVAALMDWKQLDAVPVEDVHHRPVGLVHREAVQQ 556

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              +   T +V  VM   P V+  +T LT AM+LL     + L+VV   ++ +G++ 
Sbjct: 557 ALQEKDPTTAVRLVMNPRPIVVTPETPLTEAMRLLEARKAAALLVV-HREQLVGMLT 612


>gi|138896059|ref|YP_001126512.1| hypothetical protein GTNG_2422 [Geobacillus thermodenitrificans
           NG80-2]
 gi|196248952|ref|ZP_03147652.1| CBS domain containing protein [Geobacillus sp. G11MC16]
 gi|134267572|gb|ABO67767.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
           NG80-2]
 gi|196211828|gb|EDY06587.1| CBS domain containing protein [Geobacillus sp. G11MC16]
          Length = 198

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 9/143 (6%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        +V     + DAI  +  +  G + VVD+   L
Sbjct: 48  FYTGKTGTQLLADKIKKMKVADYQSIPVVVNENMSVYDAIVTMFLEDVGTLFVVDDESLL 107

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLM 318
            G+++  D+ R     ++L  + V  +M + P       +D+L+ VA QL+    I  + 
Sbjct: 108 VGVLSRKDLLRASIGKQELTAIPVNIIMTRMPNIAVCYKDDSLIDVAEQLIE-KQIDAMP 166

Query: 319 VVDDCQK---AIGIVHFLDLLRF 338
           VV   +K    +G +   ++ + 
Sbjct: 167 VVRKTEKGYEVVGRITKTNMTKA 189



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  + V D     P V+ E+  +  A+  +   ++  L VVDD    +G++   DL
Sbjct: 58  LADKIKKMKVADYQSI-PVVVNENMSVYDAIVTMFLEDVGTLFVVDDESLLVGVLSRKDL 116

Query: 336 LRFGI 340
           LR  I
Sbjct: 117 LRASI 121


>gi|301320655|gb|ADK69298.1| SIS domain protein [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 277

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 9/192 (4%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            +  +SL  NS +  A  +II+     S L    Q  +        + +     ++ +  
Sbjct: 83  DQITYSLTSNSLILNAYNNIISSLDETSKLTIEQQDTIKNLISKIKKAL-----KIAVFA 137

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G + +I       L   G     V+     +     +  +DL I +S+SG + +L  + 
Sbjct: 138 VGGTFNIAKDFQQKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKLA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               + ++ +  +     + ++  ++ ++ +    +        TTS    L   D + I
Sbjct: 198 QVCTKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRL--VSTTSRFSLLFALDLIYI 255

Query: 192 AL--LESRNFSE 201
            L   + +N++E
Sbjct: 256 FLLSTDLKNYTE 267


>gi|227513627|ref|ZP_03943676.1| D-fructose-6-phosphate amidotransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227524772|ref|ZP_03954821.1| D-fructose-6-phosphate amidotransferase [Lactobacillus hilgardii
           ATCC 8290]
 gi|227083143|gb|EEI18455.1| D-fructose-6-phosphate amidotransferase [Lactobacillus buchneri
           ATCC 11577]
 gi|227088079|gb|EEI23391.1| D-fructose-6-phosphate amidotransferase [Lactobacillus hilgardii
           ATCC 8290]
          Length = 605

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 39/264 (14%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTP 92
           R L++L +   G+ +      ++ +     R+ I G G S   G +G KL   LA    P
Sbjct: 267 RKLAALYTQESGKPNID-DNLIDALNDAD-RIYIVGAGTSYHAGLVGKKLFEKLAH--VP 322

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +    A+E ++ D  ++++    I LS SG + + + +L          + IT+   S +
Sbjct: 323 TEVHIASEFAYDD-PLLSKKPFFIFLSQSGETADSREVLVNVNAHDYKSLTITNVENSTL 381

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGG 211
              A   + L   PE     +A T +   Q+A+   LA AL E++  +   DF +    G
Sbjct: 382 FREATYTMLLHAGPE---ISVASTKAYTAQIAVEAILAKALGEAKEQTIAEDFDIRQQLG 438

Query: 212 KLGTLFVCA---SDVMHSGDSIPLVKI------------GCPLIDA--ITILS------- 247
            + T         D++        V                 L  A  +  +S       
Sbjct: 439 LVATGMQAIIDEKDIIEDLAKKYFVPAPRAFYIGRGIDQTVSLEAALKLKEISYVQAEGF 498

Query: 248 ---EKRFGCVAVVDEGQKLKGIIT 268
              E + G +A+++EG  + GIIT
Sbjct: 499 ASGELKHGTIALIEEGTPVVGIIT 522


>gi|150400031|ref|YP_001323798.1| signal transduction protein [Methanococcus vannielii SB]
 gi|150012734|gb|ABR55186.1| putative signal transduction protein with CBS domains
           [Methanococcus vannielii SB]
          Length = 153

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 36/150 (24%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------- 275
           V +   +   +     +   I +  EK      +V EG+++ GII+E DI ++       
Sbjct: 4   VKNVMKTPITLNKDDSIEKVIKLFREKSISGAPIV-EGERIVGIISESDIIKSITSHDER 62

Query: 276 ------------------------FHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQL 308
                                   F +D++      V + M +    I  +T +  A + 
Sbjct: 63  VSLVLPSPFDLIELPLKTALKVEQFMEDIDNALKIEVWEAMTEKVITISPETTINKAAET 122

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + ++ I  L VV +  K +GI+   DL+  
Sbjct: 123 MVKNKIKRLPVV-ENGKLVGIITRGDLIEA 151



 Score = 40.3 bits (93), Expect = 0.40,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                    + +  +     +  A   + + +   + VV E  KL GIIT GD+    
Sbjct: 96  KIEVWEAMTEKVITISPETTINKAAETMVKNKIKRLPVV-ENGKLVGIITRGDLIEAM 152


>gi|84489206|ref|YP_447438.1| transcriptional regulator [Methanosphaera stadtmanae DSM 3091]
 gi|84372525|gb|ABC56795.1| predicted transcriptional regulator [Methanosphaera stadtmanae DSM
           3091]
          Length = 295

 Score = 67.2 bits (163), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 29/126 (23%), Positives = 53/126 (42%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K             +   I  +     L D   ILSE       +VD+   + G+I   D
Sbjct: 163 KNIISIPNVKLRDIATQQIKSITPQMQLTDICKILSENNQIGAPIVDDDNNILGVIRYSD 222

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I      +    + E+ M ++     ++  L+  M LL Q++++ L+++D   +  GIV 
Sbjct: 223 IIDAVAANKMDSTAEEFMRESVVTARDNISLSNGMTLLLQNDVTALILLDKNNEIYGIVS 282

Query: 332 FLDLLR 337
           F D+L+
Sbjct: 283 FNDMLK 288



 Score = 41.0 bits (95), Expect = 0.29,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  + + D+  +  K I     LT   ++L ++N     +VDD    +G++ + D++  
Sbjct: 168 IPNVKLRDIATQQIKSITPQMQLTDICKILSENNQIGAPIVDDDNNILGVIRYSDIIDA 226


>gi|260460253|ref|ZP_05808505.1| CBS domain containing protein [Mesorhizobium opportunistum WSM2075]
 gi|259033898|gb|EEW35157.1| CBS domain containing protein [Mesorhizobium opportunistum WSM2075]
          Length = 145

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 41/107 (38%), Gaps = 1/107 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIK 291
           V +   L  A   LS+   G V V     +  G++++ D+ R+          V  +M +
Sbjct: 17  VDLDTSLRAAALWLSKPAIGLVVVCHGSGEAAGVLSKSDLVRHLANSGPAEAPVSTLMSR 76

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +      D  L    Q +    +  L V+    K IG++   D ++ 
Sbjct: 77  SFVSCGPDDDLHSVWQTMTTQRLQNLPVLGAGAKPIGVLDIRDAMKA 123


>gi|116617666|ref|YP_818037.1| transcriptional regulator [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227432467|ref|ZP_03914454.1| RpiR family transcriptional regulator [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
 gi|116096513|gb|ABJ61664.1| Transcriptional regulator [Leuconostoc mesenteroides subsp.
           mesenteroides ATCC 8293]
 gi|227351788|gb|EEJ42027.1| RpiR family transcriptional regulator [Leuconostoc mesenteroides
           subsp. cremoris ATCC 19254]
          Length = 284

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/182 (21%), Positives = 64/182 (35%), Gaps = 6/182 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G     + T+  A +     +  L++  S+L      Q   A   + + + RV   GIG 
Sbjct: 87  GEIADTDDTIAVAQKVFGGAENALAATVSNLTAT---QLDEATLALISAR-RVGFFGIGG 142

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  +          T          +        +  +D  +V+S SG + +   I    
Sbjct: 143 SSIVAFNAYHKFLRTPIDVIAHPDYDVQLMQAVKLNSNDTAVVISHSGRNKDTLLIAKKL 202

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
               + +IA+TS   S +A  AD+VL      E         +S I QL I D L   + 
Sbjct: 203 HEQHVKIIAVTSFKDSPLAKLADLVLL--SLAEEVNFRSESMSSLIAQLTIIDTLFTLVG 260

Query: 195 ES 196
             
Sbjct: 261 SH 262


>gi|326407760|gb|ADZ64831.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           lactis CV56]
          Length = 282

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL S+L    + +    +E +          G+G S  +                +  
Sbjct: 105 ISSLNSTLNLITNRELDQTMEILLNAST-CGFFGLGGSNAVALIAFHKFLRMPLHCVYHQ 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T DD   V+S +G + +   ++   +   +P+IA+TS   S +A  AD
Sbjct: 164 DFHFQQMQAAKLTSDDCAFVISHTGKNRDTMHLVEILKSRGVPIIALTSFASSPLAKAAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L      E          S + Q+++ DAL +     
Sbjct: 224 VALI--SISEEISFRPEAVASTVSQISLLDALFMMYGMK 260


>gi|239630644|ref|ZP_04673675.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
 gi|239526927|gb|EEQ65928.1| transcriptional regulator [Lactobacillus paracasei subsp. paracasei
           8700:2]
          Length = 293

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++++              A+  ++  +  + + G+  S  +   L   L   G  + F 
Sbjct: 88  AIAAVRDLPDELDQSAVQSAITTLRQAR-HIYLVGVSASALVAQDLYLKLIRAGYVAIFD 146

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H    +       T  D ++V S+SG + E+      ARR   P+IA+T    S +   A
Sbjct: 147 HDTHTAVERAYYTTPADAMVVFSYSGLTKEVVLAAQQARRNQTPVIAVTRHEPSPLREAA 206

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             V+ LP  P      +   TS   +  + + L + +++
Sbjct: 207 SCVIALP--PTEPLLRIGAVTSMFTETYVANILFLGVVQ 243


>gi|149190814|ref|ZP_01869079.1| hypothetical protein VSAK1_07264 [Vibrio shilonii AK1]
 gi|148835376|gb|EDL52348.1| hypothetical protein VSAK1_07264 [Vibrio shilonii AK1]
          Length = 629

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/123 (18%), Positives = 57/123 (46%), Gaps = 12/123 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVD---------EGQKLKGIITEGDI-FRNF 276
               P ++    + +A  ++++++   + ++D         +   + GIIT+ D+  R  
Sbjct: 157 TRDAPTIERSSTIQNAARLMADEQVSSLLIIDPEIVDNDEEDTSPVLGIITDRDLCTRVL 216

Query: 277 HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            + L+    V  VM  +   +  +  +  AM  + ++N+  L V+   ++ IGI+   D+
Sbjct: 217 AESLDPQDEVGSVMSTDVISLDHNAYVYEAMLTMLRYNVHHLPVL-KNKQPIGIIETTDI 275

Query: 336 LRF 338
           +R+
Sbjct: 276 VRY 278



 Score = 36.0 bits (82), Expect = 8.9,   Method: Composition-based stats.
 Identities = 15/68 (22%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM-----VVDDCQK----AI 327
             DL T  V  ++ ++   I   + +  A +L+    +S L+     +VD+ ++     +
Sbjct: 144 ENDLTTSKVRTLLTRDAPTIERSSTIQNAARLMADEQVSSLLIIDPEIVDNDEEDTSPVL 203

Query: 328 GIVHFLDL 335
           GI+   DL
Sbjct: 204 GIITDRDL 211


>gi|253575791|ref|ZP_04853126.1| transcription regulator [Paenibacillus sp. oral taxon 786 str. D14]
 gi|251844834|gb|EES72847.1| transcription regulator [Paenibacillus sp. oral taxon 786 str. D14]
          Length = 284

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 37/194 (19%), Positives = 79/194 (40%), Gaps = 6/194 (3%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALR-SIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           M     + K      + + +  T+Q  ++ ++    + +  +   LQ EL       V+ 
Sbjct: 71  MRLSVDNAKPQRPGYYDIERGETIQNVIQKTVSNSLQAIQDMMLHLQPEL---IEQVVDS 127

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
            +     + + G+G S  + +  A      G  +F +         L       L + +S
Sbjct: 128 FREAS-VIHMYGVGASAIVAADAAQKWLRLGKQAFALQDEHLIAAALASAPPGALFMGIS 186

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +SG++ E+  +   A+++ +  I ++      VA  AD++L  P+ PE+     A ++  
Sbjct: 187 YSGNTKEVLQLFRVAQKYGVRTIGLSRFGNHKVAELADLMLYTPQAPEATLRSGASSSR- 245

Query: 180 IMQLAIGDALAIAL 193
           + QL + D L  A 
Sbjct: 246 LAQLVMIDILFFAY 259


>gi|14591373|ref|NP_143451.1| hypothetical protein PH1595 [Pyrococcus horikoshii OT3]
 gi|3258024|dbj|BAA30707.1| 172aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 172

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 20/139 (14%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEG 270
                +  + +      +P+++    +I+A+ IL  +    V VV++    KL G+I   
Sbjct: 11  NAFHSMKLTQITPPLTQMPILEENSSIINALKILRTRHH--VWVVNDRKEMKLVGVIRYF 68

Query: 271 DIFRNFHKDLNTL----------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
           D+F                           V ++M +N   I ED  +  A++ +R++ +
Sbjct: 69  DVFYILMPPKRARLGSISPLFKSIFGGAEKVGEIMERNVLTIEEDATILDALEKMRRYKV 128

Query: 315 SVLMVVDDCQKAIGIVHFL 333
            +L VVD+  +  G V   
Sbjct: 129 GILAVVDEEGRLKGEVSLR 147


>gi|322834569|ref|YP_004214596.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
 gi|321169770|gb|ADW75469.1| transcriptional regulator, RpiR family [Rahnella sp. Y9602]
          Length = 246

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/129 (20%), Positives = 56/129 (43%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    +       A  +I   + R++  G+G SG +G   A   ++ G  S F+ 
Sbjct: 86  ISYFKSINNSDFDELLEKAARQIANAQ-RIIFVGVGTSGSLGKYSARFFSNVGKFSTFID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+        + +  +I++T+   S +A  AD
Sbjct: 145 DPYFPINS--DMYKDAIAIILSVSGETEEVLRFATQFSQHNCKIISLTNSENSTLARLAD 202

Query: 158 IVLTLPKEP 166
           + ++     
Sbjct: 203 LNISYHMPQ 211


>gi|302342642|ref|YP_003807171.1| polynucleotide adenylyltransferase region [Desulfarculus baarsii
           DSM 2075]
 gi|301639255|gb|ADK84577.1| Polynucleotide adenylyltransferase region [Desulfarculus baarsii
           DSM 2075]
          Length = 893

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 44/103 (42%), Gaps = 2/103 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L +     +      + VVD GQ + G+IT  D+ +  +  L  L+V + M    
Sbjct: 335 PPQLLLRELPERFTRYDINVMPVVD-GQDILGVITRQDVEKAVYHGLGDLAVREYMTPGV 393

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K +  D  L    + L +    ++ V+ +  + IG++   DLL
Sbjct: 394 KPVAPDAPLLEVEKALLEQRFRLVPVM-ENGEMIGVITRTDLL 435



 Score = 41.4 bits (96), Expect = 0.20,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 275 NFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             H  +N ++S  ++M           LL    +   +++I+V+ VVD      G++   
Sbjct: 312 ALHTHINPSISARELMTSPVISAPPQLLLRELPERFTRYDINVMPVVDGQDIL-GVITRQ 370

Query: 334 DLLRF 338
           D+ + 
Sbjct: 371 DVEKA 375


>gi|329576796|gb|EGG58289.1| SIS domain protein [Enterococcus faecalis TX1467]
          Length = 295

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F +  SV         + ++  A + + A    LS+    L  EL       +  + + K
Sbjct: 83  FQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDN---VLALMYSAK 139

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G S  +          T     ++         +  +T +D + + S SG +
Sbjct: 140 T-LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKT 198

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            E   +    ++ +  +I +T  + S +A  +D  + +
Sbjct: 199 KESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIV 236


>gi|330812673|ref|YP_004357135.1| RpiR family transcriptional regulator [Pseudomonas brassicacearum
           subsp. brassicacearum NFM421]
 gi|327380781|gb|AEA72131.1| putative transcriptional regulator, RpiR family [Pseudomonas
           brassicacearum subsp. brassicacearum NFM421]
          Length = 288

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L          AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREKLDP---VALQKAVTAMSQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ I +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|284926551|gb|ADC28903.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni IA3902]
          Length = 341

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 50/105 (47%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIEEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+T     +++  + +I    V+D+  + + I     LL+ 
Sbjct: 70  ITIKENTSKEQLLKISAKTDIYDFPVLDEKGQILSIKSVSSLLKA 114


>gi|283954947|ref|ZP_06372460.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni 414]
 gi|283793557|gb|EFC32313.1| putative sugar-phosphate nucleotide transferase [Campylobacter
           jejuni subsp. jejuni 414]
          Length = 341

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKNP 293
           +   + +A+ I+ ++R     VVD+  K  G+I++ +I +   H      S++D+  KNP
Sbjct: 10  LNSSIEEALKIVGQERVRLGIVVDKKDKFLGVISDSNIRKALIHGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+      ++L  + +I    V+D+  K + I     LL+ 
Sbjct: 70  ITIKENMGKEELLKLSAKTDIYDFPVLDNKGKILFIKSISSLLKA 114


>gi|255970666|ref|ZP_05421252.1| predicted protein [Enterococcus faecalis T1]
 gi|255974245|ref|ZP_05424831.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T2]
 gi|256618102|ref|ZP_05474948.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis ATCC 4200]
 gi|256761032|ref|ZP_05501612.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T3]
 gi|256958419|ref|ZP_05562590.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis DS5]
 gi|256960488|ref|ZP_05564659.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Merz96]
 gi|256962981|ref|ZP_05567152.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis HIP11704]
 gi|257078269|ref|ZP_05572630.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis JH1]
 gi|257080459|ref|ZP_05574820.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis E1Sol]
 gi|257083183|ref|ZP_05577544.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|257088253|ref|ZP_05582614.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis D6]
 gi|257091384|ref|ZP_05585745.1| predicted protein [Enterococcus faecalis CH188]
 gi|257417270|ref|ZP_05594264.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis AR01/DG]
 gi|257417986|ref|ZP_05594980.1| predicted protein [Enterococcus faecalis T11]
 gi|257420411|ref|ZP_05597401.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|255961684|gb|EET94160.1| predicted protein [Enterococcus faecalis T1]
 gi|255967117|gb|EET97739.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T2]
 gi|256597629|gb|EEU16805.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis ATCC 4200]
 gi|256682283|gb|EEU21978.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T3]
 gi|256948915|gb|EEU65547.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis DS5]
 gi|256950984|gb|EEU67616.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Merz96]
 gi|256953477|gb|EEU70109.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis HIP11704]
 gi|256986299|gb|EEU73601.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis JH1]
 gi|256988489|gb|EEU75791.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis E1Sol]
 gi|256991213|gb|EEU78515.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|256996283|gb|EEU83585.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis D6]
 gi|257000196|gb|EEU86716.1| predicted protein [Enterococcus faecalis CH188]
 gi|257159098|gb|EEU89058.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis ARO1/DG]
 gi|257159814|gb|EEU89774.1| predicted protein [Enterococcus faecalis T11]
 gi|257162235|gb|EEU92195.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
          Length = 290

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/158 (16%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           F +  SV         + ++  A + + A    LS+    L  EL       +  + + K
Sbjct: 78  FQNVNSVNGADDISPDDDSITIAKKVLQANIYSLSNATQFLTKELLDN---VLALMYSAK 134

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G S  +          T     ++         +  +T +D + + S SG +
Sbjct: 135 T-LHFFGQGGSSIVAFDSFHKFIRTNYRCNYIFDYHMQLSFVTKLTSEDCVFIFSHSGKT 193

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
            E   +    ++ +  +I +T  + S +A  +D  + +
Sbjct: 194 KESINLARQVKKTNAKMITLTGNSGSELAGLSDEAIIV 231


>gi|229541633|ref|ZP_04430693.1| sugar isomerase (SIS) [Bacillus coagulans 36D1]
 gi|229326053|gb|EEN91728.1| sugar isomerase (SIS) [Bacillus coagulans 36D1]
          Length = 180

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 45/179 (25%), Positives = 72/179 (40%), Gaps = 19/179 (10%)

Query: 31  IIAEKRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           +   K  +  L +SL  ++  Q     VE I     R+ + G G S  I    A+ L   
Sbjct: 4   LEDAKAMVLELYASLCSKVDDQPLEQVVEVI-GRSNRLFLAGTGCSEMILRVFANRLVHL 62

Query: 90  GTPSFFVHAAEASHGDL--GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           G     +       GDL   +  + D I+  S SG +  L      A+   I ++AIT+ 
Sbjct: 63  GFRVGMI-------GDLISPVPKKGDTILFSSKSGENPVLLNAARKAKLHGINIVAITAS 115

Query: 148 NKSVVACHADIVLTLPKEPESC----PHGLAP----TTSAIMQLAIGDALAIALLESRN 198
             S +A  AD+ + LP E          GL P    T   ++   I D +  +L++ R+
Sbjct: 116 PASTLAKMADVTVLLPDESSEFESIKQAGLTPDRIGTLFELLSFLIYDVITASLMKKRH 174


>gi|251800172|ref|YP_003014903.1| RpiR family transcriptional regulator [Paenibacillus sp. JDR-2]
 gi|247547798|gb|ACT04817.1| transcriptional regulator, RpiR family [Paenibacillus sp. JDR-2]
          Length = 284

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/183 (15%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
            G   ++++      +++ +    L+     +Q       + A++ +     R +  G+G
Sbjct: 87  SGQVKIQDTLEDAVSKTLQSNINALNETFKLIQ---LDSINRAIDLLIRSD-RFIFYGVG 142

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S     +  +        +     +        ++   D+ I++S+SGS+ +   +   
Sbjct: 143 SSLMTAMEANNKFMRITNKTGCSVDSHQQAMSAALMGERDVAIIISYSGSTKDSIEVAKK 202

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           A+     +I IT   KS +  ++DI L           G    ++ I QL + D L +  
Sbjct: 203 AKERGAAIIVITRFVKSPLTSYSDITLLCGANEGPLQGGSL--SAKIAQLYLLDVLYVEY 260

Query: 194 LES 196
            + 
Sbjct: 261 FKR 263


>gi|126651367|ref|ZP_01723574.1| hypothetical protein BB14905_12395 [Bacillus sp. B14905]
 gi|126591896|gb|EAZ85979.1| hypothetical protein BB14905_12395 [Bacillus sp. B14905]
          Length = 435

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 47/128 (36%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    +   D+         +K    +     +      G   VV    KL G+IT  
Sbjct: 182 QLIKKDILFIEDIYVPMTDTAALKNDETIRHFQKLNERTTHGAFPVVTHQNKLVGMITVK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+     ++ N L VE VM KNP        +  A   +    I +L +V+D     G++
Sbjct: 242 DV---IGREENEL-VEKVMTKNPIAGSMKMSVASAGHRMIWEGIDLLPIVNDDNILQGVI 297

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 298 SRQDVLKA 305


>gi|55377180|ref|YP_135030.1| inosine monophosphate dehydrogenase [Haloarcula marismortui ATCC
           43049]
 gi|55229905|gb|AAV45324.1| inosine monophosphate dehydrogenase [Haloarcula marismortui ATCC
           43049]
          Length = 126

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 47/127 (37%), Gaps = 5/127 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                           +  +     +  A T +  +    + V        GIIT  DI 
Sbjct: 1   MATETTVRIEDIMSTPLETISADETVKAAATQMQAQNINGIFVPGAE---AGIITTTDIV 57

Query: 274 RNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 KDL++ +V DVM    + +     L  A  ++  ++I  L V+D+ Q  +G+V 
Sbjct: 58  DAVASGKDLSSATVGDVMTSPVERVTTSLELGEAAAMMTTYDIKHLPVIDEHQDYVGMVS 117

Query: 332 FLDLLRF 338
             D+ + 
Sbjct: 118 STDITQA 124


>gi|310639862|ref|YP_003944620.1| phosphosugar isomerase transcriptional regulator [Paenibacillus
           polymyxa SC2]
 gi|309244812|gb|ADO54379.1| Phosphosugar isomerase transcriptional regulator [Paenibacillus
           polymyxa SC2]
          Length = 279

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 53/137 (38%), Gaps = 2/137 (1%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
               G V   G+G SG       +     G  +  V            ++  D+ I +S 
Sbjct: 125 LDQAGYVQFFGVGASGISAQDAKNRFLRIGRRAEAVADGHIQSMMAVSMSPGDVAIGISV 184

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGS+ +   +L+ A++    +IAIT+  KS +   ADIVL    +      G     + I
Sbjct: 185 SGSTLDTNDMLHKAKQNGATVIAITNYAKSPITSIADIVLLTAGKEAPIEGGSI--GAKI 242

Query: 181 MQLAIGDALAIALLESR 197
            QL + D +   L    
Sbjct: 243 SQLFVIDLICEGLARKH 259


>gi|163803679|ref|ZP_02197541.1| inosine monophosphate dehydrogenase-related protein [Vibrio sp.
           AND4]
 gi|159172518|gb|EDP57381.1| inosine monophosphate dehydrogenase-related protein [Vibrio sp.
           AND4]
          Length = 139

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 20  NMSLTAALDKVMQSVTLGG-PVIDENEKVIGFLSEQDLLDKLVKATYHCQDTHTVQECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  D  +     +++     +  VVDD ++ +G++   D+LR 
Sbjct: 79  DDVLFVSPDMSIIELADMMQIGKPKMYPVVDDKERLVGVITRRDVLRA 126



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD+ ++L G+IT  D+ R  
Sbjct: 70  THTVQECMHDDVLF--VSPDMSIIELADMMQIGKPKMYPVVDDKERLVGVITRRDVLRAI 127

Query: 277 HKDLNT 282
            K LN 
Sbjct: 128 GKTLNE 133



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V D M        ++  LT A+ ++++   +    V+D+ +K IG +   DLL
Sbjct: 1   MHSLKVRDYMTLQAVTFTKNMSLTAALDKVMQSVTLGG-PVIDENEKVIGFLSEQDLL 57


>gi|70733443|ref|YP_263218.1| RpiR family transcriptional regulator [Pseudomonas fluorescens
           Pf-5]
 gi|68347742|gb|AAY95348.1| transcriptional regulator, RpiR family [Pseudomonas fluorescens
           Pf-5]
          Length = 288

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +   L          AV  +   + RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVREKLDP---VALQQAVTAMSQAQ-RVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ I +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAICISQSGRSKDLLITANLVRESGAS 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSTVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|330957390|gb|EGH57650.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. maculicola str. ES4326]
          Length = 308

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         +V+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQQLDPALISKSVDMLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+   
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARANGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|331702240|ref|YP_004399199.1| CBS domain-containing protein [Lactobacillus buchneri NRRL B-30929]
 gi|329129583|gb|AEB74136.1| CBS domain containing protein [Lactobacillus buchneri NRRL B-30929]
          Length = 204

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 50/129 (38%), Gaps = 6/129 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
               L    + A  + +       ++    L +A+  L  +  G + V+ + Q+L G+I+
Sbjct: 63  QAKPLSYHKLYAEPIANILQKPTEIREDATLTEAVNTLFIEDVGSLYVIGDRQELVGLIS 122

Query: 269 EGDIFRNFHKDLNT--LSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
             D+ R    + N        VM + P    +  D  +    QLL    +  L VVD  Q
Sbjct: 123 RKDLLRATLNNTNASLTLASTVMTRMPNIFTVTPDMSVLQTGQLLLDRKVDSLPVVDKDQ 182

Query: 325 --KAIGIVH 331
             K +G + 
Sbjct: 183 PTKVVGKIT 191



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 17/46 (36%), Positives = 25/46 (54%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I ED  LT A+  L   ++  L V+ D Q+ +G++   DLLR 
Sbjct: 84  PTEIREDATLTEAVNTLFIEDVGSLYVIGDRQELVGLISRKDLLRA 129


>gi|330816991|ref|YP_004360696.1| CBS domain-containing protein [Burkholderia gladioli BSR3]
 gi|327369384|gb|AEA60740.1| CBS domain-containing protein [Burkholderia gladioli BSR3]
          Length = 149

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 48/119 (40%), Gaps = 6/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNF---HKD 279
               +        L +A   +  +  G + VV   D  +   GI+T+ DI         +
Sbjct: 7   CTREVVTCSARITLAEAAATMRAEHAGDLVVVREQDGQRWPVGILTDRDIVVAVVGQDAE 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              L V ++M +   V      L +  + +RQH +  L VV D  + +GI+   DLLR 
Sbjct: 67  PEALLVGELMSEPVAVAHGGDDLWLVARRMRQHGVRRLPVVGDAGELLGIITLDDLLRA 125


>gi|320333935|ref|YP_004170646.1| putative signal transduction protein with CBS domains [Deinococcus
           maricopensis DSM 21211]
 gi|319755224|gb|ADV66981.1| putative signal transduction protein with CBS domains [Deinococcus
           maricopensis DSM 21211]
          Length = 140

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 4/103 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVE-DVMIKN 292
               L +A T++ E+  G V V+D G +L GI+T+ DI  R      +  +V  D +  +
Sbjct: 17  PDATLKEAATLMLERDIGNVLVMD-GDQLLGILTDRDIVIRAVAYGRDPGAVARDFVSPD 75

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              +  D  +  A + +    +  L V     K +GIV   DL
Sbjct: 76  VLTLDVDMNIEDAAREMAHRQVRRLPVT-RDGKIVGIVSLGDL 117



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++D+M  +   +  D  L  A  L+ + +I  ++V+D  Q  +GI+   D++
Sbjct: 2   TTLKDIMTMDIATLDPDATLKEAATLMLERDIGNVLVMDGDQ-LLGILTDRDIV 54


>gi|223986316|ref|ZP_03636327.1| hypothetical protein HOLDEFILI_03637 [Holdemania filiformis DSM
           12042]
 gi|223961724|gb|EEF66225.1| hypothetical protein HOLDEFILI_03637 [Holdemania filiformis DSM
           12042]
          Length = 500

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 61/162 (37%), Gaps = 12/162 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +A+AL +     F      +      +  +    +  + S  + 
Sbjct: 51  NIPMVSAIMQAVSDDRMAVALAKEGGVSFIFGSQSIESQAAMVARVKNHKAGFVVSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     L   + ++ E     + V ++     +L G++T  D      +      V D
Sbjct: 110 --ITPDMTLAQVLELVEETGHSTMPVTEDGTANGRLVGMVTSRDYR--VSRMAPETKVAD 165

Query: 288 VMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            M    K+I   E   L+    L+ +H ++ L ++D+ Q  +
Sbjct: 166 FMTPYDKLIVGHESDTLSDCNDLIWEHKLNQLPIIDENQHLL 207



 Score = 36.8 bits (84), Expect = 4.5,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 3/42 (7%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLD 334
           I  D  L   ++L+ +   S + V +D     + +G+V   D
Sbjct: 110 ITPDMTLAQVLELVEETGHSTMPVTEDGTANGRLVGMVTSRD 151


>gi|209963839|ref|YP_002296754.1| hypothetical protein RC1_0504 [Rhodospirillum centenum SW]
 gi|209957305|gb|ACI97941.1| conserved domain protein [Rhodospirillum centenum SW]
          Length = 144

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 21/124 (16%), Positives = 49/124 (39%), Gaps = 5/124 (4%)

Query: 218 VCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           +  S ++ +  S  +  +    +   + +L+  R G    +D+   + GII+E DI R  
Sbjct: 1   MHVSAILRTKGSAIITTRPSETVGSVVRLLTVNRIGAALAIDDDGGIAGIISERDIVRGL 60

Query: 277 HKD---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +    +    V D+M +          +   M  +       L V+ +  + +G +   
Sbjct: 61  GEHGAAVMERKVSDLMTRKVVGCAPSDTVASVMTKMTSGRFRHLPVM-EGGRLVGFISIG 119

Query: 334 DLLR 337
           D+++
Sbjct: 120 DVVK 123


>gi|220918301|ref|YP_002493605.1| signal transduction protein with CBS domains [Anaeromyxobacter
           dehalogenans 2CP-1]
 gi|219956155|gb|ACL66539.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-1]
          Length = 139

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
             H    +  ++   P+ +A  ++SE++ G VAV D G ++ G++TE D+          
Sbjct: 5   HKHVTREMVSLEATAPIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGAD 63

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + + M +    +           L+R H    L+V ++  + +G+V   D+++ 
Sbjct: 64  ANHPMREAMRQGLPRVSSSATEVEVAGLMRDHTTRHLLV-EEGGQVVGVVSMRDIIQL 120


>gi|209694472|ref|YP_002262400.1| HTH-type transcriptional regulator, rpiR family [Aliivibrio
           salmonicida LFI1238]
 gi|208008423|emb|CAQ78583.1| HTH-type transcriptional regulator, rpiR family [Aliivibrio
           salmonicida LFI1238]
          Length = 292

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 65/187 (34%), Gaps = 12/187 (6%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
            VT + ++ +    +Q  + S+++E   L + +S              E +K  K  +  
Sbjct: 98  DVTAEDNAEVIGHKLQATIESVLSETMNLLNFQS---------LELVAEALKDAKA-IYF 147

Query: 70  TGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKA 129
            G+G SG             G            +    ++   D  + +S SG S E   
Sbjct: 148 FGVGSSGLTAESAKHKFMRIGLNVDAFTNNHFMYVKSSLMQPGDFAVGISHSGCSVETTK 207

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            L  A+      IAIT   +S +  ++D VL                 + I QL + D +
Sbjct: 208 ALRLAKDNGATTIAITHNPRSDITKYSDYVLVNGNRQGQLQGDSI--GTKISQLFVLDLI 265

Query: 190 AIALLES 196
              L++ 
Sbjct: 266 YTLLVKR 272


>gi|195425853|ref|XP_002061178.1| GK10285 [Drosophila willistoni]
 gi|194157263|gb|EDW72164.1| GK10285 [Drosophila willistoni]
          Length = 541

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/190 (17%), Positives = 61/190 (32%), Gaps = 22/190 (11%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGK 212
           + L           AP  S+ M       +AIA+       +   N +     +      
Sbjct: 75  VDLSSPLTKAITLRAPLVSSPMDTVTESEMAIAMALCGGIGIIHHNCTPEYQAL------ 128

Query: 213 LGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                       H     P V      + D +    +  F    V + G    KL G++T
Sbjct: 129 ---EVHKVKKYKHGFMRDPSVMSPNNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +F ++   L + D+M        +   L  A  +L +     L +V+   + + 
Sbjct: 186 SRDI--DFRENQPNLLLADIMTTELVTAPDGITLPTANNILEKSKKGKLPIVNQAGELVA 243

Query: 329 IVHFLDLLRF 338
           ++   DL + 
Sbjct: 244 MIARTDLKKA 253


>gi|121729725|ref|ZP_01682166.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|147673820|ref|YP_001216224.1| hypothetical protein VC0395_A0268 [Vibrio cholerae O395]
 gi|254285457|ref|ZP_04960421.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|121628542|gb|EAX61025.1| conserved hypothetical protein [Vibrio cholerae V52]
 gi|146315703|gb|ABQ20242.1| conserved hypothetical protein [Vibrio cholerae O395]
 gi|150424319|gb|EDN16256.1| conserved hypothetical protein [Vibrio cholerae AM-19226]
 gi|227012561|gb|ACP08771.1| acetoin utilization protein [Vibrio cholerae O395]
          Length = 169

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           ++G + R   K+L  + VED+M ++P  +L    L  A  L+   +I  + +VD  +K +
Sbjct: 10  SDGSLRR---KELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLL 66

Query: 328 GIVHFLDLLRF 338
           GIV   DLL  
Sbjct: 67  GIVSQRDLLAA 77



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 11/132 (8%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G                      +     L DA  ++       V +VD  +KL GI+++
Sbjct: 12  GSLRRKELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQ 71

Query: 270 GDIFRNFHKDL----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            D+       L              + +VM  +   +     L  +   +++H I  L V
Sbjct: 72  RDLLAAQESSLQRSAQGDSLTFETPLFEVMHTDVASVAPQAGLKESAIYMQKHKIGCLPV 131

Query: 320 VDDCQKAIGIVH 331
           V      +GI+ 
Sbjct: 132 VAKD-VLVGIIT 142



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +  V     L ++   + + + GC+ VV +   L GIIT+ D
Sbjct: 101 MHTDVASVAPQAGLKESAIYMQKHKIGCLPVVAKD-VLVGIITDSD 145


>gi|15640756|ref|NP_230386.1| acetoin utilization protein AcuB, putative [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121591362|ref|ZP_01678647.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|153217320|ref|ZP_01951071.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|153802822|ref|ZP_01957408.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|153818835|ref|ZP_01971502.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|153822736|ref|ZP_01975403.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|153824628|ref|ZP_01977295.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227080916|ref|YP_002809467.1| acetoin utilization protein [Vibrio cholerae M66-2]
 gi|254847875|ref|ZP_05237225.1| acetoin utilization protein AcuB [Vibrio cholerae MO10]
 gi|297581138|ref|ZP_06943062.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|298499128|ref|ZP_07008935.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
 gi|9655182|gb|AAF93902.1| acetoin utilization protein AcuB, putative [Vibrio cholerae O1
           biovar El Tor str. N16961]
 gi|121546778|gb|EAX56948.1| conserved hypothetical protein [Vibrio cholerae 2740-80]
 gi|124113661|gb|EAY32481.1| conserved hypothetical protein [Vibrio cholerae 1587]
 gi|124121647|gb|EAY40390.1| conserved hypothetical protein [Vibrio cholerae MZO-3]
 gi|126510617|gb|EAZ73211.1| conserved hypothetical protein [Vibrio cholerae NCTC 8457]
 gi|126519767|gb|EAZ76990.1| conserved hypothetical protein [Vibrio cholerae B33]
 gi|149741846|gb|EDM55875.1| conserved hypothetical protein [Vibrio cholerae MZO-2]
 gi|227008804|gb|ACP05016.1| acetoin utilization protein [Vibrio cholerae M66-2]
 gi|254843580|gb|EET21994.1| acetoin utilization protein AcuB [Vibrio cholerae MO10]
 gi|297534454|gb|EFH73291.1| conserved hypothetical protein [Vibrio cholerae RC385]
 gi|297543461|gb|EFH79511.1| conserved hypothetical protein [Vibrio cholerae MAK 757]
          Length = 169

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 3/71 (4%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           ++G + R   K+L  + VED+M ++P  +L    L  A  L+   +I  + +VD  +K +
Sbjct: 10  SDGSLRR---KELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLL 66

Query: 328 GIVHFLDLLRF 338
           GIV   DLL  
Sbjct: 67  GIVSQRDLLAA 77



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 11/132 (8%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G                      +     L DA  ++       V +VD  +KL GI+++
Sbjct: 12  GSLRRKELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQ 71

Query: 270 GDIFRNFHKDL----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            D+       L              + +VM  +   +     L  +   +++H I  L V
Sbjct: 72  RDLLAAQESSLQRSAQGDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPV 131

Query: 320 VDDCQKAIGIVH 331
           V      +GI+ 
Sbjct: 132 VAKD-VLVGIIT 142



 Score = 36.4 bits (83), Expect = 7.0,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +  V     L ++   + + + GC+ VV +   L GIIT+ D
Sbjct: 101 MHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAKD-VLVGIITDSD 145


>gi|115477102|ref|NP_001062147.1| Os08g0499200 [Oryza sativa Japonica Group]
 gi|42407340|dbj|BAD08801.1| putative CLC-f chloride channel protein [Oryza sativa Japonica
           Group]
 gi|113624116|dbj|BAF24061.1| Os08g0499200 [Oryza sativa Japonica Group]
          Length = 750

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 51/141 (36%), Gaps = 34/141 (24%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + +A  ++ +K+  CV VVD    L+GI+T GDI R   +       
Sbjct: 579 MSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKGFESELSEDT 638

Query: 279 ----------DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMV 319
                     D N+  V   + +                DT L+ A  L+    I  L V
Sbjct: 639 PRNGANSSTLDANSSLVSSCLTRGFQYHGNERGLVTCFPDTDLSTAKVLMEVKGIKQLPV 698

Query: 320 V--------DDCQKAIGIVHF 332
           V        D  +K +G++H+
Sbjct: 699 VKRRAGRRNDGRRKVLGLLHY 719



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/60 (26%), Positives = 25/60 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K    +     +  A +L+     + ++VVD      GIV   D+ R G
Sbjct: 570 LDDLKVSQAMSKQFIKVTPTVTIKEATRLMHDKQQNCVLVVDSEDFLEGIVTIGDIRRKG 629


>gi|310641194|ref|YP_003945952.1| signal transduction protein with cbs and drtgg domains
           [Paenibacillus polymyxa SC2]
 gi|309246144|gb|ADO55711.1| Putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus polymyxa SC2]
          Length = 444

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 54/126 (42%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D+  S      +KI   L +   + +   +   A+VDE  +L GI++    
Sbjct: 190 IKKKIMLIEDIAASKPKTLTLKINSTLTEFEELSATTGYHHFAIVDEWNRLIGIVS---- 245

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            ++        +++  MI+NP  +   T L  A Q++    +  L VVD  +K +G V  
Sbjct: 246 RKDVEGLQPEHTMDKCMIRNPITVTYQTSLASAAQMMAWEGVDYLPVVDRNRKLLGSVTR 305

Query: 333 LDLLRF 338
            ++L  
Sbjct: 306 REVLEA 311


>gi|187778916|ref|ZP_02995389.1| hypothetical protein CLOSPO_02511 [Clostridium sporogenes ATCC
           15579]
 gi|187772541|gb|EDU36343.1| hypothetical protein CLOSPO_02511 [Clostridium sporogenes ATCC
           15579]
          Length = 584

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLS 284
                  V     +  A   +++     V +VDE   + GI T+ D+++  ++    + +
Sbjct: 15  MKTDFIKVLKNEAISSAFNRMAKLYKDEVLIVDEDDNIIGIFTKNDLYKLENEGKRFSDN 74

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +E+ + ++   I E+  +  A  ++ ++ I  L +V   +K IGIVH  DL
Sbjct: 75  LENYIKRDVITISEEKSIISARNIMVKNKIERLPIV-HNRKIIGIVHLDDL 124


>gi|254250609|ref|ZP_04943928.1| hypothetical protein BCPG_05506 [Burkholderia cenocepacia PC184]
 gi|124879743|gb|EAY67099.1| hypothetical protein BCPG_05506 [Burkholderia cenocepacia PC184]
          Length = 141

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 49/112 (43%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L +A  ++S+   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQSLREAARLMSDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +VE V+        ED  ++V  + +    I  + VVD  ++ +GIV   DL
Sbjct: 67  AVEGVVSGPANWCYEDDDISVVQKKMEDAQIRRVPVVDRQKRLVGIVALGDL 118



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 4   VSEVMTRDAATIGPTQSLREAARLMSDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|103487058|ref|YP_616619.1| DegT/DnrJ/EryC1/StrS aminotransferase [Sphingopyxis alaskensis
           RB2256]
 gi|98977135|gb|ABF53286.1| DegT/DnrJ/EryC1/StrS aminotransferase [Sphingopyxis alaskensis
           RB2256]
          Length = 500

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 5/107 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
           L++ G  L DA+  L+E   G +  VD   +    +T+GDI R     L     ++ V  
Sbjct: 12  LLQSGTLLRDALGRLNETGLGILLHVDASGRFLQTVTDGDIRRLLIAGLTLDSPIDHV-- 69

Query: 291 KNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           ++   I     +    A+ L+ +H+I  L ++D   + +G+    DL
Sbjct: 70  RDSTSITAPDGIGDEAALALMDRHSIDQLPLLDGAGRVVGLYLRRDL 116


>gi|229099145|ref|ZP_04230079.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-29]
 gi|228684373|gb|EEL38317.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-29]
          Length = 214

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLKQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|163791490|ref|ZP_02185897.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Carnobacterium sp. AT7]
 gi|159873255|gb|EDP67352.1| phosphosugar-binding transcriptional regulator, RpiR family protein
           [Carnobacterium sp. AT7]
          Length = 283

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/181 (19%), Positives = 71/181 (39%), Gaps = 6/181 (3%)

Query: 10  SVTRKGHSLMK-NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVV 68
           SV   G++ ++   T+      ++       S+E ++     F     +E I++    V 
Sbjct: 79  SVDESGYAEIEAEETIGTIKNKLLT--NAFKSMEETISLMNEFDIERVIELIESAS-MVY 135

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           + G+G S  I   +    +  G               LG   ++ L   +S SG + E+ 
Sbjct: 136 VYGVGNSRIIAENMVQKWSRVGKIVICPTDNHQLVSMLGAAPKNALFFGISNSGETREII 195

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDA 188
            ++  A++ S+  + +T   ++ +   AD  +   K  ES    ++  +S   QL   D 
Sbjct: 196 ELIKLAKKCSLKTVGLTQFGQNSLTNKADYTIQTVKTIESDSQFIS--SSLHAQLIAIDV 253

Query: 189 L 189
           L
Sbjct: 254 L 254


>gi|20093430|ref|NP_619505.1| hypothetical protein MA4651 [Methanosarcina acetivorans C2A]
 gi|19918804|gb|AAM07985.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
          Length = 274

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 61/148 (41%), Gaps = 10/148 (6%)

Query: 183 LAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDA 242
           L + D   + +L  R  +E             +L           D+   V     + DA
Sbjct: 51  LVVHDNQVLGVLTMRGLTEQLGTRRKQSKPASSL----HVATAVSDNFVKVLPDTDVKDA 106

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
           +T++ +K  G V +V +     G +T  ++ +    +  T    +VM KNP ++     +
Sbjct: 107 LTLMKKK--GGVIIVTDNGNAMGWVTPQELMKV---NHFTGFAGEVMEKNPIIVSPSDRV 161

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           + A +L+   N+  L V+ +  K +GI+
Sbjct: 162 SHARRLILDKNVGRLPVI-ENGKLVGII 188



 Score = 56.8 bits (136), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 53/123 (43%), Gaps = 13/123 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
              +  +V     +  A  ++ +K  G + V+ E  KL GII E DI             
Sbjct: 148 MEKNPIIVSPSDRVSHARRLILDKNVGRLPVI-ENGKLVGIIAEDDIAFAMRSFRDLVAD 206

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  L V D+M ++   +  +T L+  +  + ++++  + V++  ++ +G +   
Sbjct: 207 NQQDSRIKNLLVGDIMTRSVVNVYTNTPLSDTVDTMLEYDVGGVPVLNLEEELVGFLARR 266

Query: 334 DLL 336
           +++
Sbjct: 267 NII 269



 Score = 41.0 bits (95), Expect = 0.26,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%), Gaps = 2/54 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+D+M   P  I +   ++ A+ L+ + +   L+VV    + +G++    L 
Sbjct: 17  MQVKDIM-VQPHKIDKSDTISHALDLMEKKDTKRLLVV-HDNQVLGVLTMRGLT 68


>gi|157693795|ref|YP_001488257.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Bacillus pumilus SAFR-032]
 gi|157682553|gb|ABV63697.1| glycine betaine/carnitine/choline ABC superfamily ATP binding
           cassette transporter, ABC protein [Bacillus pumilus
           SAFR-032]
          Length = 382

 Score = 67.2 bits (163), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 5/130 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F       +          +M++      V+    L DAI I+ EKR   + VVDE  
Sbjct: 233 EEFIGKERLLQSNPNMERVEQMMNTSPVTITVEQ--TLTDAIYIMREKRVDSLLVVDENG 290

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            LKG I   DI            V +++      + E  LL   ++ +    I  + VVD
Sbjct: 291 VLKGYI---DIETIDANRRKAAFVGEILNTEFYTVQEGALLRDTVRKILIRGIKYVPVVD 347

Query: 322 DCQKAIGIVH 331
                 GIV 
Sbjct: 348 AKGHLKGIVT 357



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 21/123 (17%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +  +V +   + +AI +          V+ +  ++  + T  DI RN         
Sbjct: 182 QKTLNKTIVFVTHDMDEAIKLADR------IVILKDGEIVQVGTPEDILRNPANEFVEEF 235

Query: 276 ------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                    + N   VE +M  +P  I  +  LT A+ ++R+  +  L+VVD+     G 
Sbjct: 236 IGKERLLQSNPNMERVEQMMNTSPVTITVEQTLTDAIYIMREKRVDSLLVVDENGVLKGY 295

Query: 330 VHF 332
           +  
Sbjct: 296 IDI 298


>gi|257094695|ref|YP_003168336.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
 gi|257047219|gb|ACV36407.1| putative signal transduction protein with CBS domains [Candidatus
           Accumulibacter phosphatis clade IIA str. UW-1]
          Length = 487

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 3/106 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFR--NFHKDLNTLSVEDVM 289
           V     + + + +L   R   V VVDEG ++  GIIT  D+ R            +  VM
Sbjct: 32  VGPAATVRETLLLLDRMRADAVVVVDEGSRMPLGIITLQDVVRRIAIETCDLQAPIAAVM 91

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                 I  D+    A  ++ + ++  L++ +       +V   DL
Sbjct: 92  TGGLITIPADSTAHQASVVMVRRSVRHLVLTEADGSYFDLVSQTDL 137



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 10/47 (21%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLDLLR 337
            P  +     +   + LL +     ++VVD+  +  +GI+   D++R
Sbjct: 28  RPLTVGPAATVRETLLLLDRMRADAVVVVDEGSRMPLGIITLQDVVR 74


>gi|66043683|ref|YP_233524.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae B728a]
 gi|63254390|gb|AAY35486.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae B728a]
          Length = 286

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G  + +F  A+  +   +  +   G+G  S     +L + L   G P     
Sbjct: 102 ATLRQHLAGFDATRFAAAIACVTDAR-MIHTFGMGGCSSLCSEELQTRLVRLGYPVAACR 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 161 DPVMMRMVAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L  S   S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELALS---SPED 260


>gi|283767932|ref|ZP_06340847.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
 gi|283461811|gb|EFC08895.1| transcriptional regulator [Staphylococcus aureus subsp. aureus H19]
          Length = 292

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 44/178 (24%), Positives = 71/178 (39%), Gaps = 4/178 (2%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
           T     L++N +V+     +I   R  +++       +  Q     + +K   G + + G
Sbjct: 82  TNPHLELIENESVETLKNKMI--ARATNTMRFVATNIMDAQIDAICDVLKNA-GTIFLFG 138

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
            G S      L   L+  G     +H         G     D +I ++  GS  EL++I 
Sbjct: 139 FGASSLTIGDLFQKLSRIGLNVRLLHETHLLVSTFGTHDDRDCMIFVTNQGSHSELQSIA 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             A  +SIP+I I+S   + VA  AD  L +    +     +A TTS   QL   D L
Sbjct: 199 QVATHYSIPIITISSTANNPVAQIADYAL-IYGRTDENEMRMAATTSLFAQLFTVDIL 255


>gi|295691481|ref|YP_003595174.1| putative signal transduction protein [Caulobacter segnis ATCC
           21756]
 gi|295433384|gb|ADG12556.1| putative signal transduction protein with CBS domains [Caulobacter
           segnis ATCC 21756]
          Length = 142

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/115 (20%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTL 283
               + + +    +      +++   G V VV E  K+ G++T+ DI  R   +      
Sbjct: 7   MTTQVSIARPTDSIRQVAQTMAQVESGVVPVV-EDGKVVGVVTDRDIVLRVVAEGRSFDS 65

Query: 284 SVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + + M       + ED +L  A   +  H +  L+V++D     GI+   D+ +
Sbjct: 66  PISEAMSDGEVLSVKEDDVLADATAKMANHQVRRLVVLNDAGALTGILSLGDVAK 120



 Score = 37.2 bits (85), Expect = 4.2,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D M     +      +    Q + Q    V+ VV+D  K +G+V   D++
Sbjct: 1   MKVSDAMTTQVSIARPTDSIRQVAQTMAQVESGVVPVVED-GKVVGVVTDRDIV 53



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 29/56 (51%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           VK    L DA   ++  +   + V+++   L GI++ GD+ +++       ++E++
Sbjct: 79  VKEDDVLADATAKMANHQVRRLVVLNDAGALTGILSLGDVAKDYGAKQVGKTLEEI 134


>gi|307822036|ref|ZP_07652268.1| putative signal transduction protein with CBS domains
           [Methylobacter tundripaludum SV96]
 gi|307736602|gb|EFO07447.1| putative signal transduction protein with CBS domains
           [Methylobacter tundripaludum SV96]
          Length = 152

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 6/107 (5%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGD-IFRNFHK--DLNTLSVEDVM 289
              L +A  ++ E   G + VVDE    +   GI+T+ D +     K  D++  SV D+M
Sbjct: 17  EMSLPEAAQLMREYHVGDLVVVDEIDGKRMPVGIVTDRDMVIEVIAKSLDIDEFSVGDIM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                 + E   +   ++L+R   +  + VV+     +G++   D+L
Sbjct: 77  GPQLVSVQEKDGVFETIRLMRTKGVRRIPVVNQEGGLVGMMSADDIL 123



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQK--AIGIVHFLDLL 336
           +S+ +   +       +  L  A QL+R++++  L+VVD+   K   +GIV   D++
Sbjct: 1   MSIGEFCNREVVFATREMSLPEAAQLMREYHVGDLVVVDEIDGKRMPVGIVTDRDMV 57


>gi|229180985|ref|ZP_04308320.1| Acetoin utilization protein AcuB [Bacillus cereus 172560W]
 gi|228602542|gb|EEK60028.1| Acetoin utilization protein AcuB [Bacillus cereus 172560W]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSIDMLQQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNLVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|119898039|ref|YP_933252.1| hypothetical protein azo1748 [Azoarcus sp. BH72]
 gi|119670452|emb|CAL94365.1| conserved hypothetical protein [Azoarcus sp. BH72]
          Length = 146

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               + +V     + DA  +++E   G + V  E  +L G++T+ DI  R      +   
Sbjct: 7   MTPDVRMVTPSQSIHDAARLMAEWDVGSLPVS-EDDRLVGMLTDRDITIRAVAAGRSPET 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V +VM ++ K   +D  +      + +  +  L+V+D  ++ +GIV   D+ +
Sbjct: 66  PVREVMSRDVKYCFDDDEVESVAHNMGEVQLHRLVVLDHDKRMVGIVALADIAQ 119



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 10/52 (19%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M  + +++     +  A +L+ + ++  L V +D  + +G++   D+ 
Sbjct: 3   VRDAMTPDVRMVTPSQSIHDAARLMAEWDVGSLPVSEDD-RLVGMLTDRDIT 53


>gi|82913757|ref|XP_728744.1| hypothetical protein [Plasmodium yoelii yoelii str. 17XNL]
 gi|23485248|gb|EAA20309.1| transmembrane protein, putative [Plasmodium yoelii yoelii]
          Length = 376

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/148 (18%), Positives = 45/148 (30%), Gaps = 21/148 (14%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           D Y           F   +            + G  L      +       + VVD G+ 
Sbjct: 216 DIYHFAASRAFRRTFGKTTCAGIMTPEPLTAEFGDDLESVWRRMQRHGIRALPVVDRGRH 275

Query: 263 LKGIITEGDIFRNFHKDLNTLS---------------------VEDVMIKNPKVILEDTL 301
           + GI+T  D FR+   D                          V  +M         D  
Sbjct: 276 VIGIVTFKDFFRHAPADGFGSLKARLKALLLPSPRVTSTKPEVVGQIMTAPAITARHDAP 335

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +    +LL +H I  + +VD+ +K +G+
Sbjct: 336 IVELARLLSEHGIHQVPIVDERRKLVGV 363



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/64 (28%), Positives = 26/64 (40%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R F +     +   +M   P        L    + +++H I  L VVD  +  IGIV F 
Sbjct: 224 RAFRRTFGKTTCAGIMTPEPLTAEFGDDLESVWRRMQRHGIRALPVVDRGRHVIGIVTFK 283

Query: 334 DLLR 337
           D  R
Sbjct: 284 DFFR 287


>gi|315640517|ref|ZP_07895625.1| RpiR family transcriptional regulator [Enterococcus italicus DSM
           15952]
 gi|315483721|gb|EFU74209.1| RpiR family transcriptional regulator [Enterococcus italicus DSM
           15952]
          Length = 274

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/140 (20%), Positives = 57/140 (40%), Gaps = 1/140 (0%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
            R    +   L+ ++ + Q          +EK +    R++    G +  +    A    
Sbjct: 89  QRLAHIQANKLAEVDQTFQQLDEATVSLILEKFRTAP-RIIFLAYGNTIPVAMDAAYRFN 147

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
             G  +      + +   L  +T DDL++++S SG +  L    +Y +   + LIA+T+ 
Sbjct: 148 QIGIAASAFDIWDTAAAYLLTMTEDDLVVIISNSGETRPLIQAAHYCKEQHLYLIALTNN 207

Query: 148 NKSVVACHADIVLTLPKEPE 167
            +S +A  AD+ +T      
Sbjct: 208 RQSPIATLADLHVTTATRER 227


>gi|303245076|ref|ZP_07331395.1| sugar isomerase (SIS) [Methanothermococcus okinawensis IH1]
 gi|302484556|gb|EFL47501.1| sugar isomerase (SIS) [Methanothermococcus okinawensis IH1]
          Length = 209

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 46/204 (22%), Positives = 74/204 (36%), Gaps = 41/204 (20%)

Query: 38  LSSLE--SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           + +LE       EL   F  A+   K    ++ I G+G+SG++G   A  L   G  S F
Sbjct: 10  IKNLEVLKKFDEELITIFINAIISTKYNNSKIFIYGVGRSGYVGMAFAMRLMHLGFNSHF 69

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS----------------- 138
           +            I  +DL+IV+S SG +  +  +L  A                     
Sbjct: 70  IGEPTCP-----AIEDNDLLIVISGSGETCSVVNVLKRANELKMDENKDNNKNNKDNSNN 124

Query: 139 -------------IPLIAITSENKSVVACHADIVLTLP-KEPESCPHGLAPTTSAIMQLA 184
                        + +I+IT + ++ V   +DI + L     +  P G        M   
Sbjct: 125 KYNKNNKNNKYNNLKIISITCKKENTVKELSDIHIHLGTHNNKCFPMGTLFEE---MAFI 181

Query: 185 IGDALAIALLESRNFSENDFYVLH 208
             D +   L+E  N SEN+    H
Sbjct: 182 FLDGIIYLLMERLNISENEMKKRH 205


>gi|228954938|ref|ZP_04116956.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
 gi|228804759|gb|EEM51360.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           kurstaki str. T03a001]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  IDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|225571348|ref|ZP_03780344.1| hypothetical protein CLOHYLEM_07446 [Clostridium hylemonae DSM
           15053]
 gi|225159824|gb|EEG72443.1| hypothetical protein CLOHYLEM_07446 [Clostridium hylemonae DSM
           15053]
          Length = 287

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 32/139 (23%), Positives = 55/139 (39%), Gaps = 2/139 (1%)

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           +K+ +   R++I G G S  I       L   G        A  +   L      D+I+ 
Sbjct: 130 QKLLSSAKRIIILGHGASASICQYAFFRLTELGLNCVCNQDAHMNAAILTHPRPGDVILC 189

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG + +L   +  A +  IP I IT    S +A  + ++L+   E  +         
Sbjct: 190 VSQSGETADLYKQIEMAYQRRIPAILITGAPGSSIARLSQVILSTVSEERNILTDAL--N 247

Query: 178 SAIMQLAIGDALAIALLES 196
           S + Q  + DAL   +  +
Sbjct: 248 SRVSQFCLIDALFSMISIA 266


>gi|153834713|ref|ZP_01987380.1| CBS domain containing protein [Vibrio harveyi HY01]
 gi|156973803|ref|YP_001444710.1| hypothetical protein VIBHAR_01513 [Vibrio harveyi ATCC BAA-1116]
 gi|148868852|gb|EDL67916.1| CBS domain containing protein [Vibrio harveyi HY01]
 gi|156525397|gb|ABU70483.1| hypothetical protein VIBHAR_01513 [Vibrio harveyi ATCC BAA-1116]
          Length = 139

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 49/108 (45%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V++E +K+ G ++E D+     K      +T +VE+ M 
Sbjct: 20  DMSLTAALDKVMQSVTLGG-PVINENEKVIGFLSEQDLLDKLVKASYHCQDTHTVEECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  +  +     +++     +  VVDD +K +G++   D+LR 
Sbjct: 79  DDVLSVSPEMSIIELADMMQIGKPKMYPVVDDKEKLVGVITRRDVLRA 126



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD+ +KL G+IT  D+ R  
Sbjct: 70  THTVEECMHDDVLS--VSPEMSIIELADMMQIGKPKMYPVVDDKEKLVGVITRRDVLRAI 127

Query: 277 HKDLNT 282
            K LN 
Sbjct: 128 GKTLNE 133



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M        +D  LT A+ ++++   +    V+++ +K IG +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTKDMSLTAALDKVMQSVTLGG-PVINENEKVIGFLSEQDLL 57


>gi|328952111|ref|YP_004369445.1| CBS domain containing protein [Desulfobacca acetoxidans DSM 11109]
 gi|328452435|gb|AEB08264.1| CBS domain containing protein [Desulfobacca acetoxidans DSM 11109]
          Length = 883

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 44/104 (42%), Gaps = 2/104 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V    PL +A   ++      + V+ +   LKG+I    + +     L  L V++ M   
Sbjct: 327 VDPATPLAEAHRFMTLHNINALPVMVD-GDLKGLINRQIVEKAIFHGLENLPVQEYMTTE 385

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V+  +  L+     L  +   +L VV +  + +G++   DLL
Sbjct: 386 IAVVDPEATLSEIQDRLVINKQRLLPVV-EDGRVLGVISRTDLL 428



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 4/64 (6%)

Query: 272 IFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGI 329
           + +     ++   +  D+M      +   T L  A + +  HNI+ L V VD      G+
Sbjct: 302 LRKILQIKIHPRRNARDLMSYPVMSVDPATPLAEAHRFMTLHNINALPVMVDGD--LKGL 359

Query: 330 VHFL 333
           ++  
Sbjct: 360 INRQ 363


>gi|254167439|ref|ZP_04874291.1| CBS domain pair protein [Aciduliprofundum boonei T469]
 gi|197623702|gb|EDY36265.1| CBS domain pair protein [Aciduliprofundum boonei T469]
          Length = 278

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 60/174 (34%), Gaps = 41/174 (23%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  DF  +     +    +      +       + +  PL      +S        VVD
Sbjct: 101 ITPQDFLEV-----IEERKISEPVEKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVD 155

Query: 259 EGQKLKGIITEGDIFRNFHKD------------------------------------LNT 282
           +  KLKGI+T+ D+F     D                                    L  
Sbjct: 156 DDGKLKGIVTDRDLFEKAEVDKSVAISELGLGDDEDSWTWEGLRNVIKLFYMEEKVTLPK 215

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + VE  MIK+P  I   + +  A +++R++N S L V +     I +++  DL+
Sbjct: 216 IPVEKAMIKDPVTIFSKSPIWEAAKIMRKNNFSQLPVRNTHDDLIAMIYDSDLV 269



 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 50/112 (44%), Gaps = 5/112 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
            S + I +   G    D +  L +     V V++E  K  GI++     R+  ++     
Sbjct: 1   MSRNPICVKAPGTK-KDVLKTLVKYNITGVPVINEEGKFLGIVS----RRDIFENPGEEQ 55

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  +M ++   + E+  +  A  ++ ++    ++VVDD +  IG++   D L
Sbjct: 56  IAILMRRDVPTVKEEDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFL 107



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 27/110 (24%), Positives = 44/110 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +P VK    +  A +++       + VVD+ + + G+IT  D      +   +  V
Sbjct: 60  MRRDVPTVKEEDSIEYAASVMLRYGRRHIVVVDDEKNVIGVITPQDFLEVIEERKISEPV 119

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           E  + K    +   T L V    +   ++    VVDD  K  GIV   DL
Sbjct: 120 EKYVTKPCFPLHLCTPLPVVFCAMSLSSLPAFPVVDDDGKLKGIVTDRDL 169


>gi|330464913|ref|YP_004402656.1| CBS domain-containing protein [Verrucosispora maris AB-18-032]
 gi|328807884|gb|AEB42056.1| CBS domain-containing protein [Verrucosispora maris AB-18-032]
          Length = 141

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 4/105 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLSVEDVMI 290
                L +A  ++ E   G   VV EG  L G++T+ DI  R      D  + ++  +  
Sbjct: 18  PAETTLDEAARVMKEADIG-DVVVTEGATLAGLLTDRDIVVRAVAANSDPTSTTIGSITT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +I ++     A  L+R+  +  ++V D  +K +GIV   DL
Sbjct: 77  REVVMIEQNCSAGDAAALMRERGVRRVLVCDAERKLVGIVSLGDL 121



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 29/57 (50%), Gaps = 1/57 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++   V DVM +    +  +T L  A +++++ +I   +VV +     G++   D++
Sbjct: 1   MSDYRVADVMTRQVIYLPAETTLDEAARVMKEADIGD-VVVTEGATLAGLLTDRDIV 56



 Score = 37.6 bits (86), Expect = 2.9,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 27/60 (45%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
             + +++  C   DA  ++ E+    V V D  +KL GI++ GD+   F        + +
Sbjct: 77  REVVMIEQNCSAGDAAALMRERGVRRVLVCDAERKLVGIVSLGDLAVQFDPQSALGQISE 136


>gi|328354224|emb|CCA40621.1| IMP dehydrogenase [Pichia pastoris CBS 7435]
          Length = 522

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/187 (17%), Positives = 68/187 (36%), Gaps = 10/187 (5%)

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKL 213
            + +V    +  +         +S +  +   D A+ +ALL       ++         +
Sbjct: 51  PSSVVSLQSRLTKKITLNTPFVSSPMDTVTEADMAIYMALLGGIGILHHNCTPEEQAAMV 110

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEG 270
             +    +  +   +    +     + D         F    V ++G+   KL GI+T  
Sbjct: 111 KKVKKFENGFI---NDPITIAPTVTVGDIKEKSKRMGFTSFPVTEDGKLYSKLVGIVTSR 167

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI   FH+D +   V +VM  +     +   LT   ++LR+     L +VD     + ++
Sbjct: 168 DI--QFHED-DDSRVSEVMTTDLITANKGVSLTEGNEILRKSKKGKLPIVDKEGNLVSLL 224

Query: 331 HFLDLLR 337
              DL +
Sbjct: 225 SRTDLRK 231


>gi|313885519|ref|ZP_07819269.1| CBS domain protein [Eremococcus coleocola ACS-139-V-Col8]
 gi|312619249|gb|EFR30688.1| CBS domain protein [Eremococcus coleocola ACS-139-V-Col8]
          Length = 212

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 57/125 (45%), Gaps = 14/125 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------ 272
           +    +  V     ++ A+ +L       + V+ +  KL G++T+ +I            
Sbjct: 6   YMSQDLVTVTPETSVLKAVDVLKAHDINRLPVMVK-GKLVGLVTKEEIDLNSPTNASSLS 64

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +  L+ ++V D+M K+   +  DTLL  A + +   +I  L+V+ + +K +GI+  
Sbjct: 65  KYEMNYLLDKMTVGDIMAKHMFTVSPDTLLDEAAETMLNKSIGSLLVM-EGEKLVGIITD 123

Query: 333 LDLLR 337
            D+ R
Sbjct: 124 KDIFR 128



 Score = 44.9 bits (105), Expect = 0.019,   Method: Composition-based stats.
 Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L +A   +  K  G + V+ EG+KL GIIT+ DIFR F
Sbjct: 81  MAKHMFTVSPDTLLDEAAETMLNKSIGSLLVM-EGEKLVGIITDKDIFRTF 130



 Score = 44.1 bits (103), Expect = 0.034,   Method: Composition-based stats.
 Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           V+D M ++   +  +T +  A+ +L+ H+I+ L V+    K +G+V 
Sbjct: 3   VKDYMSQDLVTVTPETSVLKAVDVLKAHDINRLPVM-VKGKLVGLVT 48


>gi|307352870|ref|YP_003893921.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
 gi|307156103|gb|ADN35483.1| putative signal transduction protein with CBS domains
           [Methanoplanus petrolearius DSM 11571]
          Length = 292

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 48/103 (46%), Gaps = 3/103 (2%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL-NTLSVEDVMIKNPK 294
              + DAI++ S        ++D+   L GI+T  DI     K      +++ +M ++  
Sbjct: 187 NDTIKDAISLFSRHHIHGAPIMDKDM-LVGIVTLSDIAHKLDKGKGMDTTMDKIMTEDVV 245

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +   +  L   +   ++  I  +++VD  +K IGI+   D+L+
Sbjct: 246 IAPPNINLFEVIGRFKEQEIGRIVIVD-GKKPIGILTQSDILK 287


>gi|302408497|ref|XP_003002083.1| nuclear protein SNF4 [Verticillium albo-atrum VaMs.102]
 gi|261359004|gb|EEY21432.1| nuclear protein SNF4 [Verticillium albo-atrum VaMs.102]
          Length = 423

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 50/114 (43%), Gaps = 9/114 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMI 290
            +   ++D ++++ +    CV +VD+  +L  +    DI         D  + SV + + 
Sbjct: 299 HMSTSVLDVVSLMVKHDISCVPLVDKHNRLLNVFEAVDIIPCIKGGAYDDLSSSVGEALC 358

Query: 291 KNP------KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K P           +  L      +R+  +  L+VVDD  + +GI+   D+L++
Sbjct: 359 KRPDDFPGIYTCGPEDRLDSIFDTVRKSRVHRLIVVDDENRLVGIISLSDILKY 412



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/133 (15%), Positives = 50/133 (37%), Gaps = 20/133 (15%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRN 275
             +  S      V    PL +A   + + +   + +VD   +     +  +IT+  I + 
Sbjct: 209 KAIGVSPLETVSVNPMRPLYEACRRMLKTKARRIPLVDLDDETRRETVVSVITQYRILKF 268

Query: 276 FHKDLNTLSVEDVMIK------------NPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
              +    +   VM+K            +       T +   + L+ +H+IS + +VD  
Sbjct: 269 IAVNNEHNT---VMLKKAVRDVGLGTWGHLATAHMSTSVLDVVSLMVKHDISCVPLVDKH 325

Query: 324 QKAIGIVHFLDLL 336
            + + +   +D++
Sbjct: 326 NRLLNVFEAVDII 338


>gi|254388476|ref|ZP_05003710.1| RpiR-family transcriptional regulator [Streptomyces clavuligerus
           ATCC 27064]
 gi|197702197|gb|EDY48009.1| RpiR-family transcriptional regulator [Streptomyces clavuligerus
           ATCC 27064]
          Length = 354

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G S  +G  LA  L   G  +        +  +   +   D+ + ++ SGS+ 
Sbjct: 199 RIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAVAITHSGSTG 258

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V  +AD VLT     ES     A  +S   QL +
Sbjct: 259 DVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESE-LRPAAMSSRTGQLLV 317

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 318 VDCLFIGVAQR 328


>gi|167630521|ref|YP_001681020.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
 gi|167593261|gb|ABZ85009.1| cbs domain protein, putative [Heliobacterium modesticaldum Ice1]
          Length = 200

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 57/143 (39%), Gaps = 12/143 (8%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
             G  L    +    V        + +    + DA+  +  +  G ++VVD    L G++
Sbjct: 49  RSGNTLVARAISKLRVKDIKSLPVVARETVSVYDAVVTMFTEDVGTLSVVDGDGYLSGVV 108

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVV--- 320
           +  D+ +      D++ + V  VM + P    +  D  + +A + L  H I  L VV   
Sbjct: 109 SRKDLLKIAISGGDVHKMPVGMVMTRMPNIITVTPDDTVYLAAKRLITHQIDALPVVRTF 168

Query: 321 ---DDCQKA--IGIVHFLDLLRF 338
              +  ++   +G +   ++ RF
Sbjct: 169 VQPNGQERLEVVGRLTKTNITRF 191



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 3/66 (4%)

Query: 276 FHKDLNTLSVEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
             + ++ L V+D+  K+ P V  E   +  A+  +   ++  L VVD      G+V   D
Sbjct: 55  VARAISKLRVKDI--KSLPVVARETVSVYDAVVTMFTEDVGTLSVVDGDGYLSGVVSRKD 112

Query: 335 LLRFGI 340
           LL+  I
Sbjct: 113 LLKIAI 118


>gi|153004316|ref|YP_001378641.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152027889|gb|ABS25657.1| CBS domain containing protein [Anaeromyxobacter sp. Fw109-5]
          Length = 144

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              +   +     +++AI +L EK    + V+ +G KL G++TE  +             
Sbjct: 12  MTRNPITIGDDASIVEAIHLLREKNIRRLPVM-KGGKLVGLVTEKMLLGYMPAKATSLDQ 70

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+   V   M  +P  +   T L+ A +LL    ++ ++VVDD    +GI+   
Sbjct: 71  WELHYLLSKTPVTAAMNPSPHAVKVGTPLSEAAKLLHDRKLNGVIVVDDRGDLVGILTTT 130

Query: 334 DLLRF 338
           + L  
Sbjct: 131 NALEA 135



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L+V D M +NP  I +D  +  A+ LLR+ NI  L V+    K +G+V    LL
Sbjct: 5   KLTVGDWMTRNPITIGDDASIVEAIHLLREKNIRRLPVM-KGGKLVGLVTEKMLL 58


>gi|163942396|ref|YP_001647280.1| CBS domain-containing protein [Bacillus weihenstephanensis KBAB4]
 gi|229019894|ref|ZP_04176692.1| Acetoin utilization protein AcuB [Bacillus cereus AH1273]
 gi|229135503|ref|ZP_04264289.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST196]
 gi|163864593|gb|ABY45652.1| CBS domain containing membrane protein [Bacillus weihenstephanensis
           KBAB4]
 gi|228647968|gb|EEL04017.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST196]
 gi|228741414|gb|EEL91616.1| Acetoin utilization protein AcuB [Bacillus cereus AH1273]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|300863897|ref|ZP_07108815.1| magnesium transporter [Oscillatoria sp. PCC 6506]
 gi|300338083|emb|CBN53961.1| magnesium transporter [Oscillatoria sp. PCC 6506]
          Length = 465

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 19/81 (23%), Positives = 42/81 (51%), Gaps = 4/81 (4%)

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
           V D  ++L GI+T GD+           ++ ++M ++   +  DT      +L+++++  
Sbjct: 188 VTDAARRLTGILTLGDLV----TSPLDKTIGEIMTRDLVSVQTDTDQEEVARLIQRYDFL 243

Query: 316 VLMVVDDCQKAIGIVHFLDLL 336
            + VVD  Q+ +GI+   D++
Sbjct: 244 AVPVVDSEQRLVGIITVDDVI 264


>gi|269469032|gb|EEZ80596.1| signal-transduction protein [uncultured SUP05 cluster bacterium]
 gi|269469202|gb|EEZ80738.1| hypothetical protein Sup05_0144 [uncultured SUP05 cluster
           bacterium]
          Length = 148

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 45/134 (33%), Gaps = 22/134 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
              ++  V     + D   ++         VVD+G  L GII+E DI ++          
Sbjct: 7   MSTNVKTVGPDDLVKDIAILMIMDHISGAPVVDDGNNLVGIISEKDILQHMFPKLDEVMS 66

Query: 277 ------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                       +KD   + + ++M K    I  D     A   +       + V     
Sbjct: 67  DTYFDFENMEHNYKDTMNVKIGELMTKEVASIDLDMPCLKAASTMWLKRFRRIPVT-HKG 125

Query: 325 KAIGIVHFLDLLRF 338
           K +GIV   D+ R 
Sbjct: 126 KLVGIVSIGDVHRA 139



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+D+M  N K +  D L+     L+   +IS   VVDD    +GI+   D+L+
Sbjct: 1   MQVQDIMSTNVKTVGPDDLVKDIAILMIMDHISGAPVVDDGNNLVGIISEKDILQ 55


>gi|229013870|ref|ZP_04170998.1| Acetoin utilization protein AcuB [Bacillus mycoides DSM 2048]
 gi|228747539|gb|EEL97414.1| Acetoin utilization protein AcuB [Bacillus mycoides DSM 2048]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLKQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|206978113|ref|ZP_03238996.1| acetoin utilization protein AcuB [Bacillus cereus H3081.97]
 gi|217962152|ref|YP_002340722.1| acetoin utilization protein AcuB [Bacillus cereus AH187]
 gi|222098138|ref|YP_002532195.1| acetoin utilization protein [Bacillus cereus Q1]
 gi|229141400|ref|ZP_04269938.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST26]
 gi|206743649|gb|EDZ55073.1| acetoin utilization protein AcuB [Bacillus cereus H3081.97]
 gi|217064568|gb|ACJ78818.1| acetoin utilization protein AcuB [Bacillus cereus AH187]
 gi|221242196|gb|ACM14906.1| acetoin utilization protein [Bacillus cereus Q1]
 gi|228642181|gb|EEK98474.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST26]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|78780108|ref|YP_398220.1| Mg2+ transporter [Prochlorococcus marinus str. MIT 9312]
 gi|78713607|gb|ABB50784.1| magnesium transporter [Prochlorococcus marinus str. MIT 9312]
          Length = 468

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 58/127 (45%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+   P  + I  L         V D+ + L GI++ 
Sbjct: 149 GRLMTTEFIDLKEMQTAAEALALVRKRAPYTETIYSLY--------VTDKERHLTGILSL 200

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM K+   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 201 RDLVTA----DPSKPIGDVMTKDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 256

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 257 VTVDDLI 263



 Score = 41.4 bits (96), Expect = 0.23,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 147 TAGRLMTTEFIDLKEMQTAAEALALVRKRAPYTETIYSLYVTDKERHLTGILSLRDLVTA 206


>gi|323129396|gb|ADX16826.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
          Length = 304

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 132 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 190

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 191 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 250

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 251 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 284


>gi|254381369|ref|ZP_04996734.1| hypothetical protein SSAG_01036 [Streptomyces sp. Mg1]
 gi|194340279|gb|EDX21245.1| hypothetical protein SSAG_01036 [Streptomyces sp. Mg1]
          Length = 147

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 20/103 (19%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVM 289
            +     +  A+ +L       V + D+  +  GI+T   +  +  K        V D+ 
Sbjct: 27  QISDHTSIDRALDVLRGSHSQYVLIRDDTGRCAGIVTRDQLTAHGAKPWYAENTRVRDIA 86

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            ++          + A   +R+ +++VL VVD+   A+GI+  
Sbjct: 87  HEHSPFARPGMPASEAAAAMRERSLTVLPVVDEDGFAVGILTI 129



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H             D+ H        + G P  +A   + E+    + VVDE     GI+
Sbjct: 70  HGAKPWYAENTRVRDIAHEHSPFA--RPGMPASEAAAAMRERSLTVLPVVDEDGFAVGIL 127

Query: 268 T 268
           T
Sbjct: 128 T 128


>gi|94986179|ref|YP_605543.1| signal-transduction protein [Deinococcus geothermalis DSM 11300]
 gi|94556460|gb|ABF46374.1| putative signal-transduction protein containing CBS domains
           [Deinococcus geothermalis DSM 11300]
          Length = 141

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  V     L +  T++ E+  G V V+ E  +  GIIT+ DI  R      +   
Sbjct: 8   MTPDPVTVDPLATLKEVATLMLEQDIGAVLVM-EHDRPTGIITDRDIVIRAVAYGHDPGT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V D    +   +  +T +  A + +    +  + V  +  + +G+V   DL
Sbjct: 67  AVTDYTTGDVFTLDAETDVEDAAREMAARQLRRIPVT-EHGRVVGMVSLGDL 117



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++ D+M  +P  +     L     L+ + +I  ++V++   +  GI+   D++
Sbjct: 3   TLRDIMTPDPVTVDPLATLKEVATLMLEQDIGAVLVMEHD-RPTGIITDRDIV 54


>gi|299068305|emb|CBJ39527.1| conserved protein of unknown function
           (cystathionine-beta-synthase-CBS domain) [Ralstonia
           solanacearum CMR15]
          Length = 378

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV---KIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P V        +  A+ +L      
Sbjct: 208 WLDIDPEDLTALLQEMQQQAYARTFHTLTCADIMTPSVVTASAATSVPHALRLLQRHGVK 267

Query: 253 CVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTL------SVEDVMIKNPKVILED 299
            + V+D+ ++L GI+T  D+        R   +D  T+       V  VM      I  D
Sbjct: 268 ALPVIDDDRRLIGIVTRADLAGTTPRVPRQRLRDWFTIGAMTPPRVRGVMNPRVLTIRAD 327

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + +        + VVD   +  GI+   D++  
Sbjct: 328 APMADLVPMFASAGHHHIPVVDAHGRLAGILTQADVIHA 366



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ D+    ++
Sbjct: 324 IRADAPMADLVPMFASAGHHHIPVVDAHGRLAGILTQADVIHALYR 369


>gi|268324231|emb|CBH37819.1| conserved hypothetical protein, CBS domain pair family [uncultured
           archaeon]
          Length = 159

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/129 (21%), Positives = 51/129 (39%), Gaps = 23/129 (17%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDI-------------- 272
            +PL++    L   ++IL+   +  V VV+     KL GIITE DI              
Sbjct: 26  DMPLIEKDASLECVLSILTGSDY--VWVVESKGSKKLVGIITEHDILVIFSPRKEVSFFG 83

Query: 273 ---FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
               ++ H +        +M +NP     +  +   +  +  H +  + VV +  + IG 
Sbjct: 84  FPSKKSLHYETFE-KAGHLMSRNPIRCRPEEKVEDVLNKMIDHRVRRIPVV-ENGEIIGE 141

Query: 330 VHFLDLLRF 338
           +    L+R 
Sbjct: 142 ITLHHLIRK 150


>gi|186685341|ref|YP_001868537.1| peptidase M50 [Nostoc punctiforme PCC 73102]
 gi|186467793|gb|ACC83594.1| peptidase M50 [Nostoc punctiforme PCC 73102]
          Length = 374

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI--LSEKRFGCVAVV 257
           +   F  +       T     +         P+V     L +      +S + +    V 
Sbjct: 228 NAAQFARVQEKLTGLTAEDAVTHD------SPIVSGNLSLREFADERVISGQNWHRFLVT 281

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKV----ILEDTLLTVAMQLLRQHN 313
           D+  +L G I   ++        +   V++VM   P      +  D  L   +QLL +  
Sbjct: 282 DDDGQLVGAIAVDNLRTVPTALWSETQVKEVM--RPITESTTVQSDQPLLEVIQLLEEQK 339

Query: 314 ISVLMVVDDCQKAIGIV 330
           +SVL V+ +    +GI+
Sbjct: 340 LSVLPVIRENGVLVGIL 356


>gi|126462375|ref|YP_001043489.1| signal-transduction protein [Rhodobacter sphaeroides ATCC 17029]
 gi|126104039|gb|ABN76717.1| putative signal-transduction protein with CBS domains [Rhodobacter
           sphaeroides ATCC 17029]
          Length = 144

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 52/119 (43%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
            S D +  V  G  +  A  +LS +R G V V  +G++ +G+++E DI R   +      
Sbjct: 10  KSDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSHDGKRPEGMLSERDIVRELGRRGAGCL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  VE +M                MQ++ +     L V+    + +G++   D+++  +
Sbjct: 70  SDKVEAIMTSKIVTCACTDEADRIMQVMTEGRFRHLPVM-AEGEMVGLISIGDVVKARL 127


>gi|30022736|ref|NP_834367.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 14579]
 gi|75760727|ref|ZP_00740750.1| Acetoin utilization acuB protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|206969647|ref|ZP_03230601.1| acetoin utilization protein AcuB [Bacillus cereus AH1134]
 gi|218232240|ref|YP_002369463.1| acetoin utilization protein AcuB [Bacillus cereus B4264]
 gi|218899819|ref|YP_002448230.1| acetoin utilization protein AcuB [Bacillus cereus G9842]
 gi|228903181|ref|ZP_04067315.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 4222]
 gi|228910518|ref|ZP_04074332.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 200]
 gi|228923421|ref|ZP_04086708.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228941845|ref|ZP_04104392.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228960935|ref|ZP_04122568.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228974770|ref|ZP_04135336.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228981365|ref|ZP_04141665.1| Acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
 gi|229048372|ref|ZP_04193940.1| Acetoin utilization protein AcuB [Bacillus cereus AH676]
 gi|229072171|ref|ZP_04205379.1| Acetoin utilization protein AcuB [Bacillus cereus F65185]
 gi|229081923|ref|ZP_04214415.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-2]
 gi|229112131|ref|ZP_04241674.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-15]
 gi|229129946|ref|ZP_04258912.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-Cer4]
 gi|229147232|ref|ZP_04275589.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST24]
 gi|229152865|ref|ZP_04281048.1| Acetoin utilization protein AcuB [Bacillus cereus m1550]
 gi|296505133|ref|YP_003666833.1| acetoin utilization protein AcuB [Bacillus thuringiensis BMB171]
 gi|29898295|gb|AAP11568.1| Acetoin utilization acuB protein [Bacillus cereus ATCC 14579]
 gi|74491782|gb|EAO54975.1| Acetoin utilization acuB protein [Bacillus thuringiensis serovar
           israelensis ATCC 35646]
 gi|206735335|gb|EDZ52503.1| acetoin utilization protein AcuB [Bacillus cereus AH1134]
 gi|218160197|gb|ACK60189.1| acetoin utilization protein AcuB [Bacillus cereus B4264]
 gi|218542514|gb|ACK94908.1| acetoin utilization protein AcuB [Bacillus cereus G9842]
 gi|228630685|gb|EEK87331.1| Acetoin utilization protein AcuB [Bacillus cereus m1550]
 gi|228636241|gb|EEK92714.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-ST24]
 gi|228653637|gb|EEL09509.1| Acetoin utilization protein AcuB [Bacillus cereus BDRD-Cer4]
 gi|228671454|gb|EEL26755.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-15]
 gi|228701511|gb|EEL54005.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-2]
 gi|228710909|gb|EEL62876.1| Acetoin utilization protein AcuB [Bacillus cereus F65185]
 gi|228723097|gb|EEL74474.1| Acetoin utilization protein AcuB [Bacillus cereus AH676]
 gi|228778565|gb|EEM26832.1| Acetoin utilization protein AcuB [Bacillus thuringiensis Bt407]
 gi|228785173|gb|EEM33186.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           thuringiensis str. T01001]
 gi|228798831|gb|EEM45811.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pakistani str. T13001]
 gi|228818057|gb|EEM64135.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           berliner ATCC 10792]
 gi|228836242|gb|EEM81596.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           huazhongensis BGSC 4BD1]
 gi|228849082|gb|EEM93922.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 200]
 gi|228856463|gb|EEN00989.1| Acetoin utilization protein AcuB [Bacillus thuringiensis IBL 4222]
 gi|296326185|gb|ADH09113.1| acetoin utilization protein AcuB [Bacillus thuringiensis BMB171]
 gi|326942451|gb|AEA18347.1| acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           chinensis CT-43]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|226311658|ref|YP_002771552.1| control catabolite protein of gluconeogenic genes [Brevibacillus
           brevis NBRC 100599]
 gi|226094606|dbj|BAH43048.1| probable control catabolite protein of gluconeogenic genes
           [Brevibacillus brevis NBRC 100599]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 46/121 (38%), Gaps = 4/121 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY   P   + +  +    V        +V       DAI  L  +  G + VV++   L
Sbjct: 60  FYAGRPASSVISERLHKLLVNDYKAVPIVVSESASAYDAIVTLFLEDVGTLFVVNQKGYL 119

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+I+  D+ R    +K L  + V  +M + P       D  L  A + L    I  L V
Sbjct: 120 AGVISRKDLLRASLGNKTLEDVPVSIIMSRMPNIITCAPDETLYAAAKKLIDFQIDSLPV 179

Query: 320 V 320
           V
Sbjct: 180 V 180


>gi|45359029|ref|NP_988586.1| putative CBS domain-containing signal transduction protein
           [Methanococcus maripaludis S2]
 gi|45047904|emb|CAF31022.1| conserved hypothetical protein [Methanococcus maripaludis S2]
          Length = 213

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 18/114 (15%), Positives = 48/114 (42%), Gaps = 5/114 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     +   I ++ + +     +VD   K+ G  T  D+     K++    +
Sbjct: 7   MDKKFIKIYPDFTVQTVIDLMYKNKKFSTPIVDNDGKMVGWTTAIDLMIVSDKNI---PI 63

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D+M    +  V+ ++     A+  + ++ +  + V++D  + +GIV   D+ +
Sbjct: 64  KDIMSPIEDVIVVNKNEPAREAVTKIVEYKVISIPVLNDEGRVVGIVRNCDITK 117



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 15/69 (21%), Positives = 33/69 (47%), Gaps = 1/69 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
             D+M   + + +V    P  +A+T + E +   + V+++  ++ GI+   DI +   K 
Sbjct: 63  IKDIMSPIEDVIVVNKNEPAREAVTKIVEYKVISIPVLNDEGRVVGIVRNCDITKTLSK- 121

Query: 280 LNTLSVEDV 288
           L  + V  +
Sbjct: 122 LYDIPVHSI 130


>gi|332637565|ref|ZP_08416428.1| sugar phosphatase isomerase [Weissella cibaria KACC 11862]
          Length = 180

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 58/170 (34%), Gaps = 9/170 (5%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
             +  ++      A E I     R+ + G G+SG +    A  L   G   F +      
Sbjct: 12  QEVMTQVDDAQLDAAENIITKDKRIFVLGAGRSGLMVKGFAMRLMHIGYTVFVIGETITP 71

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 I   D+++ +S SG++  +      A    + +I +TS   S +A   +  + +
Sbjct: 72  -----SIAEGDVLVAVSGSGTTGSVVGPAQKAADNGVHVIGVTSNPTSPLATLGEATIVV 126

Query: 163 PKEPES----CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
           P   ++        L  T          D L + +    + S +     H
Sbjct: 127 PGATKAGDGVKSIQLLSTLFDQSVHITLDILTLMISRRDHVSNDTAKATH 176


>gi|331703306|ref|YP_004399993.1| transcription regulator gntR [Mycoplasma mycoides subsp. capri LC
           str. 95010]
 gi|328801861|emb|CBW54014.1| Transcription regulator gntR [Mycoplasma mycoides subsp. capri LC
           str. 95010]
          Length = 277

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 68/182 (37%), Gaps = 7/182 (3%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            +  +SL  NS +  A  +II+       L    Q  +    +     +     ++ +  
Sbjct: 83  DQITYSLTSNSLILNAYNNIISSLNETFKLTIEQQDTIKNLINRIKNAL-----KIAVFA 137

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G + ++       L   G     V+    ++     + ++DL I +S+SG + +L  + 
Sbjct: 138 VGGTFNVAKDFEQKLLRIGFNITAVNDFHNAYLLACQLNKNDLAIFISYSGETLDLIKLA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               + ++ +  +     + ++  ++ ++ +    +        +TS    L   D + I
Sbjct: 198 QVCTKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRL--VSSTSRFSLLFALDLIYI 255

Query: 192 AL 193
            L
Sbjct: 256 FL 257


>gi|326622809|gb|EGE29154.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Dublin str. 3246]
          Length = 304

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 132 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 190

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 191 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 250

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 251 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 284


>gi|310641459|ref|YP_003946217.1| signal transduction protein with cbs domains [Paenibacillus
           polymyxa SC2]
 gi|309246409|gb|ADO55976.1| Putative signal transduction protein with CBS domains
           [Paenibacillus polymyxa SC2]
          Length = 225

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 53/121 (43%), Gaps = 11/121 (9%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVE 286
              L+       DA+ +L ++  G + V  E Q+L GI+T  D+ +    H DL+T+ V 
Sbjct: 96  DPILISGDATAYDAVLMLFQQNTGTLMVTGEEQELIGIVTRKDLLKVMLGHTDLHTVPVT 155

Query: 287 DVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDC-------QKAIGIVHFLDLLR 337
             M +      +     L  A+  L +H I+ L V+D+        Q  +G V   D++ 
Sbjct: 156 MAMTRRAQMTTLAPGDSLLEAISRLIRHQINCLPVLDEPCTSSAPIQGLVGRVTKTDIMN 215

Query: 338 F 338
            
Sbjct: 216 A 216



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +    L  L+V D++  +P +I  D     A+ +L Q N   LMV  + Q+ IGIV   D
Sbjct: 80  HIGSMLKKLTVADILS-DPILISGDATAYDAVLMLFQQNTGTLMVTGEEQELIGIVTRKD 138

Query: 335 LLR 337
           LL+
Sbjct: 139 LLK 141


>gi|227548070|ref|ZP_03978119.1| cyclic nucleotide-binding protein [Corynebacterium lipophiloflavum
           DSM 44291]
 gi|227079868|gb|EEI17831.1| cyclic nucleotide-binding protein [Corynebacterium lipophiloflavum
           DSM 44291]
          Length = 620

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 44/107 (41%), Gaps = 5/107 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTL-SVEDVMI 290
           V     + +   ++ E     + V    +   GI+T+ D   R   K ++T   + +VM 
Sbjct: 166 VDGAATIAEGARLMDEHAISSLIVTGATEP--GIVTDRDFRSRVVAKGVDTQAPLREVMT 223

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              + I  D L+  AM ++       L V D   + IG+    D++R
Sbjct: 224 SPVRTIASDALVFEAMLVMGDLGTHHLPVTD-GGEIIGVATSSDIMR 269



 Score = 37.6 bits (86), Expect = 3.2,   Method: Composition-based stats.
 Identities = 17/107 (15%), Positives = 37/107 (34%), Gaps = 4/107 (3%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           +A     + + AI   +     E    ++ DF        + T       +      +  
Sbjct: 172 IAEGARLMDEHAISSLIVTGATEPGIVTDRDFRSRVVAKGVDTQAPLREVMT---SPVRT 228

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           +     + +A+ ++ +     + V D G ++ G+ T  DI R    D
Sbjct: 229 IASDALVFEAMLVMGDLGTHHLPVTD-GGEIIGVATSSDIMRQLKAD 274


>gi|239815003|ref|YP_002943913.1| signal transduction protein with CBS domains [Variovorax paradoxus
           S110]
 gi|239801580|gb|ACS18647.1| putative signal transduction protein with CBS domains [Variovorax
           paradoxus S110]
          Length = 157

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 3/103 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTLSV-EDVMIK 291
                +  A   + E   G + V D GQ+L G++T+ DI  R   +     +   +VM K
Sbjct: 16  SPSDTVALAAQAMDELDIGAIPVCD-GQRLLGMVTDRDIVLRVVAQTRPLDTALSEVMSK 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + K   E+  +   M  +  + +  + VVD  ++ +G++   D
Sbjct: 75  DVKWCSENDNVETVMDEMAGYQVRRMPVVDRGRRLVGMLSLGD 117



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V ++M +  + +     + +A Q + + +I  + V D  Q+ +G+V   D++
Sbjct: 2   TRVSELMTRGVRTLSPSDTVALAAQAMDELDIGAIPVCD-GQRLLGMVTDRDIV 54


>gi|213968355|ref|ZP_03396499.1| Hex regulon repressor [Pseudomonas syringae pv. tomato T1]
 gi|301383486|ref|ZP_07231904.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. tomato Max13]
 gi|302060484|ref|ZP_07252025.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. tomato K40]
 gi|302129893|ref|ZP_07255883.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. tomato NCPPB 1108]
 gi|213926993|gb|EEB60544.1| Hex regulon repressor [Pseudomonas syringae pv. tomato T1]
          Length = 288

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         +V+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQQLDPALVSKSVDMLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+   
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARANGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|297568601|ref|YP_003689945.1| signal transduction protein with CBS domains [Desulfurivibrio
           alkaliphilus AHT2]
 gi|296924516|gb|ADH85326.1| putative signal transduction protein with CBS domains
           [Desulfurivibrio alkaliphilus AHT2]
          Length = 202

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           +     L +A T++ +     + V+ E  ++ G ITE DI    F      + V +VM++
Sbjct: 17  IGRDALLQEAGTLMKKHGIRHLPVM-EDGQMVGFITESDIRHYAFPSMERDIFVHEVMVR 75

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           N   I  +  +  A +L+  + I  L V+D  +K +GI+   DLL  
Sbjct: 76  NIITININATIEKAARLIHDYKIGGLPVLDK-KKLVGIITATDLLSA 121



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           K    I  D LL  A  L+++H I  L V+ +  + +G +   D+
Sbjct: 12  KELVTIGRDALLQEAGTLMKKHGIRHLPVM-EDGQMVGFITESDI 55


>gi|228967764|ref|ZP_04128780.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           sotto str. T04001]
 gi|228791918|gb|EEM39504.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           sotto str. T04001]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|30264738|ref|NP_847115.1| acetoin utilization protein AcuB [Bacillus anthracis str. Ames]
 gi|47530211|ref|YP_021560.1| acetoin utilization protein AcuB [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49187556|ref|YP_030809.1| acetoin utilization protein AcuB [Bacillus anthracis str. Sterne]
 gi|65322035|ref|ZP_00394994.1| COG0517: FOG: CBS domain [Bacillus anthracis str. A2012]
 gi|165869698|ref|ZP_02214356.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0488]
 gi|167633831|ref|ZP_02392154.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0442]
 gi|167638017|ref|ZP_02396295.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0193]
 gi|170685795|ref|ZP_02877018.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0465]
 gi|170705592|ref|ZP_02896056.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0389]
 gi|177651314|ref|ZP_02934145.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0174]
 gi|190568364|ref|ZP_03021272.1| acetoin utilization protein AcuB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227817457|ref|YP_002817466.1| acetoin utilization protein AcuB [Bacillus anthracis str. CDC 684]
 gi|228929717|ref|ZP_04092734.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229600423|ref|YP_002868946.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0248]
 gi|254687476|ref|ZP_05151332.1| acetoin utilization protein AcuB [Bacillus anthracis str.
           CNEVA-9066]
 gi|254725039|ref|ZP_05186822.1| acetoin utilization protein AcuB [Bacillus anthracis str. A1055]
 gi|254736777|ref|ZP_05194483.1| acetoin utilization protein AcuB [Bacillus anthracis str. Western
           North America USA6153]
 gi|254741814|ref|ZP_05199501.1| acetoin utilization protein AcuB [Bacillus anthracis str. Kruger B]
 gi|254754588|ref|ZP_05206623.1| acetoin utilization protein AcuB [Bacillus anthracis str. Vollum]
 gi|254757420|ref|ZP_05209447.1| acetoin utilization protein AcuB [Bacillus anthracis str. Australia
           94]
 gi|30259413|gb|AAP28601.1| acetoin utilization protein AcuB [Bacillus anthracis str. Ames]
 gi|47505359|gb|AAT34035.1| acetoin utilization protein AcuB [Bacillus anthracis str. 'Ames
           Ancestor']
 gi|49181483|gb|AAT56859.1| acetoin utilization protein AcuB [Bacillus anthracis str. Sterne]
 gi|164714527|gb|EDR20046.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0488]
 gi|167513834|gb|EDR89202.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0193]
 gi|167530632|gb|EDR93334.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0442]
 gi|170129717|gb|EDS98580.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0389]
 gi|170670259|gb|EDT20999.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0465]
 gi|172083140|gb|EDT68202.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0174]
 gi|190560620|gb|EDV14597.1| acetoin utilization protein AcuB [Bacillus anthracis
           Tsiankovskii-I]
 gi|227005514|gb|ACP15257.1| acetoin utilization protein AcuB [Bacillus anthracis str. CDC 684]
 gi|228829896|gb|EEM75516.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pondicheriensis BGSC 4BA1]
 gi|229264831|gb|ACQ46468.1| acetoin utilization protein AcuB [Bacillus anthracis str. A0248]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 43/118 (36%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
           +    +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  RPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLRPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|258509347|ref|YP_003172098.1| CBS domain-containing protein [Lactobacillus rhamnosus GG]
 gi|257149274|emb|CAR88247.1| CBS domain protein [Lactobacillus rhamnosus GG]
 gi|259650627|dbj|BAI42789.1| conserved hypothetical protein [Lactobacillus rhamnosus GG]
          Length = 185

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R    D + TL    VM +
Sbjct: 68  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 127

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L V+        IG + 
Sbjct: 128 MPNVVTVTADTTIMAASKLLLKHNVDSLPVIQKHGDTHVIGKIT 171



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 65  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 110


>gi|84490064|ref|YP_448296.1| hypothetical protein Msp_1276 [Methanosphaera stadtmanae DSM 3091]
 gi|84373383|gb|ABC57653.1| conserved hypothetical protein [Methanosphaera stadtmanae DSM 3091]
          Length = 281

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/100 (23%), Positives = 41/100 (41%), Gaps = 7/100 (7%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             + + +    EK  G   V     +L G+IT  D+ +N  +D     V  +M +NP   
Sbjct: 24  SSIYEILRE--EKLSGVPIVKKHTGELAGVITRSDLIKNPDED----QVAMIMSRNPITA 77

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D  +    + +  +NI  + +     K +GIV   D+ 
Sbjct: 78  APDEDVNSVARKMINNNIRRVPIT-VDNKLVGIVTSADIT 116



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 55/162 (33%), Gaps = 33/162 (20%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L  +        +   ++P V    PL  A +I +   F  V  +++  K  GI+TE
Sbjct: 117 NKALWKINNTEPVEKYMVRNVPTVWDKTPLPIAYSITNFFNFKSVISLNDDGKASGILTE 176

Query: 270 GDIF---RNFHKD------------------------------LNTLSVEDVMIKNPKVI 296
            D     R   +                                +   V+DV       +
Sbjct: 177 TDFINESRVVEEQTIHNSSVSTEGDKWTWNSQSVMYILKNRLQFSDKIVKDVAGDKLVSV 236

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              T +     +LRQ+NI  + V++   + IG+V   DL+R 
Sbjct: 237 TRKTSVKECANILRQYNIEQVPVLNMADEPIGLVRSSDLMRA 278



 Score = 43.3 bits (101), Expect = 0.052,   Method: Composition-based stats.
 Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIKNP 293
               +      +       V +  +  KL GI+T  DI  +   K  NT  VE  M++N 
Sbjct: 79  PDEDVNSVARKMINNNIRRVPITVDN-KLVGIVTSADITNKALWKINNTEPVEKYMVRNV 137

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + + T L +A  +    N   ++ ++D  KA GI+   D +
Sbjct: 138 PTVWDKTPLPIAYSITNFFNFKSVISLNDDGKASGILTETDFI 180


>gi|45358471|ref|NP_988028.1| CBS domain-containing protein [Methanococcus maripaludis S2]
 gi|44921229|emb|CAF30464.1| CBS domain [Methanococcus maripaludis S2]
          Length = 126

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 56/105 (53%), Gaps = 5/105 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNP 293
            L +A  +++ K    V V  +   + G+IT  D+   F +    +L  ++++DV  K  
Sbjct: 19  SLFEAFKVMNHKGVKRVFVRIDEN-IDGVITYRDLAHLFFEKGVFELMDVTLKDVSTKEI 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+  +T A Q++   ++S L+V+D+ + A+G++   D+LR 
Sbjct: 78  LTIDENADVTHAAQMMLHADVSGLLVIDEQKNAVGVISQTDILRA 122


>gi|114567398|ref|YP_754552.1| CBS domain-containing protein [Syntrophomonas wolfei subsp. wolfei
           str. Goettingen]
 gi|114338333|gb|ABI69181.1| CBS domain containing membrane protein [Syntrophomonas wolfei
           subsp. wolfei str. Goettingen]
          Length = 154

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
               +  V     L +   IL E++   V V+D    + GI+TE D+             
Sbjct: 10  MTREVITVGKNDSLEEVARILLEEKISGVPVIDADSYVIGIVTEKDLIVKASELKMPFYV 69

Query: 275 -------------NFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                         F+ ++   +   VED M     ++ EDT ++  +++++   ++ + 
Sbjct: 70  TLFDSIIFLENPIRFNNNIKKFTASQVEDAMTTKVIMVEEDTEVSRIVEIMQDKRVNRVP 129

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV    K +GI+   D+L+
Sbjct: 130 VV-RHGKLVGIISRNDILK 147



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 26/52 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +D+M +    + ++  L    ++L +  IS + V+D     IGIV   DL+
Sbjct: 6   AKDIMTREVITVGKNDSLEEVARILLEEKISGVPVIDADSYVIGIVTEKDLI 57


>gi|297617792|ref|YP_003702951.1| signal transduction protein with CBS domains [Syntrophothermus
           lipocalidus DSM 12680]
 gi|297145629|gb|ADI02386.1| putative signal transduction protein with CBS domains
           [Syntrophothermus lipocalidus DSM 12680]
          Length = 216

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 54/145 (37%), Gaps = 12/145 (8%)

Query: 206 VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
                       +C   V        +VK    + DAI  L  +  G + V D    L G
Sbjct: 61  KSEGAQGAIRKILCQYRVKDVKSMPVVVKDTSSIYDAIVTLFTEDAGTIYVTDRDGYLAG 120

Query: 266 IITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVV- 320
           +++  D  +    H D+  + V  +M + P   V   D  +  A++ + +H I  L VV 
Sbjct: 121 VVSRKDFLKTTLGHIDIYKVPVSVIMTRMPNIIVTTPDETVIEAVKKIVEHEIDSLPVVK 180

Query: 321 ---DDCQ----KAIGIVHFLDLLRF 338
              D+      + +G +   ++ R 
Sbjct: 181 KYIDENGDEKLEVVGRITKTNIARL 205


>gi|256390595|ref|YP_003112159.1| signal transduction protein with CBS domains [Catenulispora
           acidiphila DSM 44928]
 gi|256356821|gb|ACU70318.1| putative signal transduction protein with CBS domains
           [Catenulispora acidiphila DSM 44928]
          Length = 138

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 44/109 (40%), Gaps = 3/109 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS--VEDVM 289
           ++     L  A   ++++  G   V +      GIITE DI       L+  +  VE  +
Sbjct: 23  MIGPRHTLRQAAHRMTQRGVGSAVVHNPETSGIGIITERDILHALGTGLDADTEAVESHL 82

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +         L  A + + +     L+VVD  +  +G++   D++R 
Sbjct: 83  TSDVVFATPRWTLEQAAEAMTRGGFRHLIVVDGDE-VVGMISVRDIVRA 130


>gi|49481425|ref|YP_038711.1| acetoin utilization protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|52140839|ref|YP_085991.1| acetoin utilization protein [Bacillus cereus E33L]
 gi|118479807|ref|YP_896958.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
 gi|196032890|ref|ZP_03100303.1| acetoin utilization protein AcuB [Bacillus cereus W]
 gi|196043905|ref|ZP_03111142.1| acetoin utilization protein AcuB [Bacillus cereus 03BB108]
 gi|218905894|ref|YP_002453728.1| acetoin utilization protein AcuB [Bacillus cereus AH820]
 gi|228917314|ref|ZP_04080869.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|228948412|ref|ZP_04110695.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|229124233|ref|ZP_04253425.1| Acetoin utilization protein AcuB [Bacillus cereus 95/8201]
 gi|229186925|ref|ZP_04314080.1| Acetoin utilization protein AcuB [Bacillus cereus BGSC 6E1]
 gi|229198825|ref|ZP_04325519.1| Acetoin utilization protein AcuB [Bacillus cereus m1293]
 gi|301056174|ref|YP_003794385.1| acetoin utilization protein [Bacillus anthracis CI]
 gi|49332981|gb|AAT63627.1| acetoin utilization protein [Bacillus thuringiensis serovar
           konkukian str. 97-27]
 gi|51974308|gb|AAU15858.1| acetoin utilization protein [Bacillus cereus E33L]
 gi|118419032|gb|ABK87451.1| acetoin utilization protein [Bacillus thuringiensis str. Al Hakam]
 gi|195994319|gb|EDX58274.1| acetoin utilization protein AcuB [Bacillus cereus W]
 gi|196025241|gb|EDX63911.1| acetoin utilization protein AcuB [Bacillus cereus 03BB108]
 gi|218539906|gb|ACK92304.1| acetoin utilization protein AcuB [Bacillus cereus AH820]
 gi|228584661|gb|EEK42785.1| Acetoin utilization protein AcuB [Bacillus cereus m1293]
 gi|228596662|gb|EEK54327.1| Acetoin utilization protein AcuB [Bacillus cereus BGSC 6E1]
 gi|228659535|gb|EEL15183.1| Acetoin utilization protein AcuB [Bacillus cereus 95/8201]
 gi|228811399|gb|EEM57737.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           monterrey BGSC 4AJ1]
 gi|228842355|gb|EEM87448.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           pulsiensis BGSC 4CC1]
 gi|300378343|gb|ADK07247.1| acetoin utilization protein [Bacillus cereus biovar anthracis str.
           CI]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|330886193|gb|EGH20094.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 286

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 62/166 (37%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    +F  AV  +   +  +   G+G  S     +L + +   G P     
Sbjct: 102 ATLHQHLAGFDESRFAAAVACLSDAR-MIHAFGMGGCSSLCSEELQTRMVRLGYPVAACR 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +A  A+
Sbjct: 161 DPVMMRMIAATLGPQHSLIVCSLSGRTPELLDAVTLARSYGARVLAIT-LPDSPLAQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 260


>gi|126652879|ref|ZP_01725022.1| hypothetical protein BB14905_20665 [Bacillus sp. B14905]
 gi|126590299|gb|EAZ84420.1| hypothetical protein BB14905_20665 [Bacillus sp. B14905]
          Length = 291

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/188 (17%), Positives = 70/188 (37%), Gaps = 4/188 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
             +        +  N  +Q  +  +  +   + +  ++L  +   +   AV  +   + R
Sbjct: 77  DLQRNNTDDRDIEANEPLQSIVEKVTLQSSEILTQTANLIDK--AELERAVSALAKAR-R 133

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           ++  G+G SG                S            +      D+++ +S+SG + E
Sbjct: 134 IIFFGVGASGITAMDADQKFLRINKHSKVFMDLHLGATAVVNAQEGDVVVGISFSGETHE 193

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  IL  A +     I++T    S+V+  ADI L +             T+S + QL + 
Sbjct: 194 VAKILEIAGQTPATTISLTRYGNSLVSSLADICLYVS-PNVEANFRSGATSSRLAQLLVI 252

Query: 187 DALAIALL 194
           D L + ++
Sbjct: 253 DILFMGVV 260


>gi|330684497|gb|EGG96213.1| N-acetylmuramic acid 6-phosphate etherase [Staphylococcus
           epidermidis VCU121]
          Length = 295

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 48/217 (22%), Positives = 87/217 (40%), Gaps = 25/217 (11%)

Query: 5   FSHFKSVTRKGHSL-MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
            +H  + +R   ++ +   ++Q AL+++  E + ++     +  EL+     A+ K K  
Sbjct: 1   MNHLTTESRNTETMHLDEMSIQEALQTMNDEDQFVAKAIEPIIPELTKVIKEAISKFKK- 59

Query: 64  KGRVVITGIGKSGHIGSKLASTLAST---------GTPSFFVHA-AEASHG--------- 104
            GR++  G G SG +G   A+    T         G  +    A  EA  G         
Sbjct: 60  HGRLIYIGAGTSGRLGVLDAAECVPTFNTSPDEVIGIIAGGSKAMTEAVEGAEDNEEQGK 119

Query: 105 -DLGMIT--RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT 161
            DL  I   +DD++I +S SG +  +KA L YA       ++++    S ++     VL 
Sbjct: 120 ADLKAIQLSKDDIVIGISASGRTPYVKAALAYANEVGAVSVSLSCNTNSEMSKLTQYVLE 179

Query: 162 LPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +P  P     G     S   Q  I + ++   +    
Sbjct: 180 VPVGP-EVLTGSTRLKSGTAQKLILNMISTMTMIGVG 215


>gi|326627324|gb|EGE33667.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 9]
          Length = 304

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 132 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 190

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 191 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 250

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 251 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 284


>gi|304314222|ref|YP_003849369.1| hypothetical protein MTBMA_c04550 [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587681|gb|ADL58056.1| conserved hypothetical protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 135

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 58/131 (44%), Gaps = 9/131 (6%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  V+    ++ A   L + R   + V+DE  KL GI+T  D+  
Sbjct: 3   KKLNEVKVKDVMTADVITVEPSEDVVFAFEKLMKHRISALPVLDE-GKLVGIVTASDLGH 61

Query: 275 NFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAI 327
           N   D   L  +V +VM+++   +  D  L  A++ +  ++     I+ L+V+ D  + +
Sbjct: 62  NLILDNYELGTTVGEVMVRDVATVAPDETLADAIEKMNDYSSDEGIINQLVVMSD-GEMV 120

Query: 328 GIVHFLDLLRF 338
           GI+   D++R 
Sbjct: 121 GIIADGDIIRA 131



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K LN + V+DVM  +   +     +  A + L +H IS L V+D+  K +GIV   DL
Sbjct: 1   MLKKLNEVKVKDVMTADVITVEPSEDVVFAFEKLMKHRISALPVLDE-GKLVGIVTASDL 59



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 4/55 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKR--FGCVA--VVDEGQKLKGIITEGDIFRNF 276
               +  V     L DAI  +++     G +   VV    ++ GII +GDI R  
Sbjct: 78  MVRDVATVAPDETLADAIEKMNDYSSDEGIINQLVVMSDGEMVGIIADGDIIRAL 132


>gi|199598507|ref|ZP_03211924.1| CBS domain containing protein [Lactobacillus rhamnosus HN001]
 gi|199590549|gb|EDY98638.1| CBS domain containing protein [Lactobacillus rhamnosus HN001]
          Length = 185

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 5/104 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +K+   + +A+T L     G + V+D+   L G+I+  D+ R    D + TL    VM +
Sbjct: 68  IKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRASFTDRDTTLPASIVMTR 127

Query: 292 NP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVH 331
            P    +  DT +  A +LL +HN+  L V+        IG + 
Sbjct: 128 MPNVVTVTADTTIMAASKLLLKHNVDSLPVIQKHGDTHVIGKIT 171



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 14/46 (30%), Positives = 22/46 (47%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           P  I   T +  A+  L   ++  L V+DD    +G++   DLLR 
Sbjct: 65  PTEIKLTTSMEEAVTKLFLADVGSLYVLDDDGALVGLISRKDLLRA 110


>gi|229541805|ref|ZP_04430865.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Bacillus
           coagulans 36D1]
 gi|229326225|gb|EEN91900.1| glycine betaine/L-proline ABC transporter, ATPase subunit [Bacillus
           coagulans 36D1]
          Length = 381

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 33/130 (25%), Positives = 54/130 (41%), Gaps = 5/130 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
             F       +          +M        V +   L +AI I+ E+R   + VVD  +
Sbjct: 233 ETFIGKERLLQARPNIQTVEQIMSPKAVT--VTVDKTLTEAIQIMKEQRVDSLLVVDSRK 290

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            L G I    I RN  K +    V+DV+  N   + +DTL+   ++ + +  I  + VVD
Sbjct: 291 VLLGYIDVEIIDRNRRKPVL---VKDVVETNLIAVEKDTLVRDTVRKILKRGIKYVPVVD 347

Query: 322 DCQKAIGIVH 331
              + +GIV 
Sbjct: 348 HEHRLVGIVT 357


>gi|304317166|ref|YP_003852311.1| 6-phospho-3-hexuloisomerase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
 gi|302778668|gb|ADL69227.1| 6-phospho-3-hexuloisomerase [Thermoanaerobacterium
           thermosaccharolyticum DSM 571]
          Length = 186

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 38/172 (22%), Positives = 66/172 (38%), Gaps = 12/172 (6%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
            SL+           E I     +V + G+G+   +       L   G  +++V      
Sbjct: 17  RSLETIEDKDVEKMAELILDS-NKVFVVGVGRVLLMLQAFVKRLNHIGIEAYYVGEINEP 75

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                 IT  DL+IV S SG S    AI   A+++   ++ I S   S +   +D  + +
Sbjct: 76  -----AITDKDLLIVGSGSGESAIPLAIANIAKKYKAKILYIGSNINSSIGKISDFSIRI 130

Query: 163 PKEP----ESCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVLH 208
           P       +   H + P +S   Q      DA++  +L+ +N   N  +  H
Sbjct: 131 PCPTKLKLKDELHSMQPMSSLFEQSLLLFCDAVSYIILKKKNIDLNSLWKYH 182


>gi|42783849|ref|NP_981096.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 10987]
 gi|229076174|ref|ZP_04209142.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-18]
 gi|229093766|ref|ZP_04224865.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-42]
 gi|229118155|ref|ZP_04247514.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-3]
 gi|229175379|ref|ZP_04302894.1| Acetoin utilization protein AcuB [Bacillus cereus MM3]
 gi|42739779|gb|AAS43704.1| acetoin utilization protein AcuB [Bacillus cereus ATCC 10987]
 gi|228608211|gb|EEK65518.1| Acetoin utilization protein AcuB [Bacillus cereus MM3]
 gi|228665378|gb|EEL20861.1| Acetoin utilization protein AcuB [Bacillus cereus Rock1-3]
 gi|228689651|gb|EEL43459.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-42]
 gi|228707037|gb|EEL59242.1| Acetoin utilization protein AcuB [Bacillus cereus Rock4-18]
 gi|324328560|gb|ADY23820.1| acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           finitimus YBT-020]
          Length = 214

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|76802089|ref|YP_327097.1| CBS domain-containing protein [Natronomonas pharaonis DSM 2160]
 gi|76557954|emb|CAI49538.1| CBS domain protein 3 [Natronomonas pharaonis DSM 2160]
          Length = 406

 Score = 66.8 bits (162), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 2/112 (1%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
             P V     + +   ++ +     + VV EG  + G++T  ++       L   +V D 
Sbjct: 69  HAPTVAPDENVREVARLMIDSGTQLLPVV-EGDSMVGVVTADELLEAVQSFLEAATVGDA 127

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
             +    I   T    A+   R + I+ L VVD+   A+G+V   D+    +
Sbjct: 128 YSEELISIEPQTSFGKALHSFRDNRIAHLPVVDE-GSAVGVVSLYDVTDIAV 178



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 42/146 (28%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-------------------- 272
           ++       A+    + R   + VVDE     G+++  D+                    
Sbjct: 135 IEPQTSFGKALHSFRDNRIAHLPVVDE-GSAVGVVSLYDVTDIAVRATTQSQGGDAGGTD 193

Query: 273 -------------------FRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
                               R   +D L  L V DVM+   + +  D  L  A+  +   
Sbjct: 194 PFGGEISSSSGRARRGGFGAREGERDRLLDLPVRDVMVTPVRTVTPDETLEDAVAAMFDA 253

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            +S L VV    +  GI+   D+L  
Sbjct: 254 GVSSL-VVTRDGEPDGILTKTDILDA 278



 Score = 39.1 bits (90), Expect = 0.99,   Method: Composition-based stats.
 Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 8/86 (9%)

Query: 255 AVVDEGQKLKGIITEGDIFRNFHKDLNTL--SVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            VV +   L G++T     R      ++    +  ++   P  +  D  +    +L+   
Sbjct: 35  VVVSDDGDLVGVVT----RRQLTTSHHSPEEKLASLVWHAP-TVAPDENVREVARLMIDS 89

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
              +L VV +    +G+V   +LL  
Sbjct: 90  GTQLLPVV-EGDSMVGVVTADELLEA 114


>gi|283780126|ref|YP_003370881.1| CBS domain-containing protein [Pirellula staleyi DSM 6068]
 gi|283438579|gb|ADB17021.1| CBS domain containing protein [Pirellula staleyi DSM 6068]
          Length = 286

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/124 (19%), Positives = 45/124 (36%), Gaps = 19/124 (15%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
            +    L +    L +     + VV   +KL G+I++ D+ R     +            
Sbjct: 14  CREETTLAEVHEKLQQLGVRHLPVVSSERKLVGVISKIDVLRALESQVLVASSPLFSAAD 73

Query: 281 ------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                   ++   VM            + +A+  L ++ I  L VVD+  K +G++   D
Sbjct: 74  NADSERRAIAACQVMTARVLTCSTSEEVAIALARLVENQIHSLPVVDE-GKLVGMITSSD 132

Query: 335 LLRF 338
            LR 
Sbjct: 133 FLRE 136



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            D++  NP    E+T L    + L+Q  +  L VV   +K +G++  +D+LR 
Sbjct: 4   SDLITYNPISCREETTLAEVHEKLQQLGVRHLPVVSSERKLVGVISKIDVLRA 56



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 24/157 (15%), Positives = 47/157 (29%), Gaps = 25/157 (15%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            + +DF      G   T       ++ +      V+    L + +  +         V+ 
Sbjct: 128 ITSSDFLRELACGGFPTSHDTCGQLLENAGES--VETDASLEETLLAM-HTSSSPYVVIV 184

Query: 259 EGQKLKGIITEGDIFRNF-----------------HKDLNTLSVEDVMIKNPKVILEDTL 301
            G    G+++     R                    +     ++  +  K+P        
Sbjct: 185 RGDFPVGVVS----RRALVELHVSEQLAASTLELSPEREAITTLAQLARKSP-TARPSQT 239

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                QLL  H +  L VV+   + +GIV    LL+ 
Sbjct: 240 QAEVAQLLIDHQLEALAVVNQAHRVLGIVTVDGLLQA 276


>gi|312194907|ref|YP_004014968.1| signal transduction protein with CBS domains [Frankia sp. EuI1c]
 gi|311226243|gb|ADP79098.1| putative signal transduction protein with CBS domains [Frankia sp.
           EuI1c]
          Length = 128

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 43/108 (39%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVM 289
           ++  G  L  A  +++ +  G   V+D      GI+TE D+       KD +     D +
Sbjct: 13  IIGPGHTLRQAARLMAGRGCGAAVVLDTDGAGYGILTERDVLLALAAGKDPDVEIAADHL 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++      +  L  A   + +     L VV +     G++   D++R
Sbjct: 73  TRDLVFADPEWSLDTAADAMLRGGFRHL-VVTEGGIVAGVLSMRDVVR 119


>gi|239934237|ref|ZP_04691190.1| hypothetical protein SghaA1_38917 [Streptomyces ghanaensis ATCC
           14672]
 gi|291442683|ref|ZP_06582073.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
 gi|291345578|gb|EFE72534.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
          Length = 214

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 41/121 (33%), Gaps = 16/121 (13%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-------FHKDLNT---- 282
           +   PL +   +L         VVDE     GI++  D+ R+         +D +     
Sbjct: 19  RPDTPLHEVAALLDANDIVAAPVVDEDGAPVGIVSASDVLRHETGMPDPQGQDGDDERSW 78

Query: 283 -----LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 +   +M         D  +  A + LR   +  L VV D     GIV   DLL 
Sbjct: 79  GKARARTAGALMSSPVFTARADWTIPRAARELRSRRVKQLPVVGDDGLLTGIVTRSDLLG 138

Query: 338 F 338
            
Sbjct: 139 A 139



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 20/58 (34%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +V DVM +    +  DT L     LL  ++I    VVD+    +GIV   D+LR
Sbjct: 2   LHRRTVGDVMTEEVVTLRPDTPLHEVAALLDANDIVAAPVVDEDGAPVGIVSASDVLR 59


>gi|228987915|ref|ZP_04148023.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|300118895|ref|ZP_07056608.1| acetoin utilization protein AcuB [Bacillus cereus SJ1]
 gi|228771838|gb|EEM20296.1| Acetoin utilization protein AcuB [Bacillus thuringiensis serovar
           tochigiensis BGSC 4Y1]
 gi|298723740|gb|EFI64469.1| acetoin utilization protein AcuB [Bacillus cereus SJ1]
          Length = 214

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLQQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|111027157|ref|YP_709135.1| 6-phospho-3-hexuloisomerase [Rhodococcus jostii RHA1]
 gi|110825696|gb|ABH00977.1| possible 6-phospho-3-hexuloisomerase [Rhodococcus jostii RHA1]
          Length = 193

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 43/176 (24%), Positives = 66/176 (37%), Gaps = 11/176 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L   E  L    + Q+  A   I + +  V + G G+SG      A  L   G       
Sbjct: 20  LDENERLLNSVAAEQWDRAGSLITSARA-VFVIGNGRSGLAVQMAAMRLMHLGLRVHVAG 78

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              A       I   DL+I +S SG++  +      A +    ++A+T+   S +A  AD
Sbjct: 79  EVTAP-----AIGDGDLLIAVSGSGTTASVVGAADTANKVGASVLAVTTAPDSPLARRAD 133

Query: 158 IVLTLP---KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            VL LP   K+  S         S   Q  +   DAL  AL  + + +    +  H
Sbjct: 134 EVLILPAADKQDHSAAITAQYAGSLFEQSVLLAFDALFQALWHNVDQTAERLWERH 189


>gi|315426952|dbj|BAJ48571.1| glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Candidatus Caldiarchaeum subterraneum]
          Length = 605

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/148 (22%), Positives = 64/148 (43%), Gaps = 9/148 (6%)

Query: 64  KGRVVIT-GIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
           KGRVV   G G S +     +   ++    PS+ V A+E      G +  D +I+ +S S
Sbjct: 286 KGRVVFLLGAGTSYNACLAGSYLFSAVARMPSYPVIASEFVANYGGAVGADTVILAVSQS 345

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + ++   L +AR  +  ++ +T+   S +   +   +    +      G+A T +   
Sbjct: 346 GETADVLNALDFARMRACTILGLTNTVGSTLTRVSRAYVL---QNSGPEIGVAATKTFTS 402

Query: 182 QLAIGDALAIALLESRN----FSENDFY 205
           Q+ +   +A+ L   R     F  +DF 
Sbjct: 403 QVLVLAQIALRLSRLRGKISQFEMDDFG 430


>gi|77918901|ref|YP_356716.1| tRNA nucleotidyltransferase/poly(A) polymerase [Pelobacter
           carbinolicus DSM 2380]
 gi|77544984|gb|ABA88546.1| tRNA nucleotidyltransferase/poly(A) polymerase [Pelobacter
           carbinolicus DSM 2380]
          Length = 888

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 9/108 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    +     IL+      + V+D G ++ GIIT   + +  H  L  + V + M  +
Sbjct: 322 VQKADTIAQVREILTRYNINAMPVLD-GDRVVGIITRQVVEKAAHHLLEDIPVSEYMSSD 380

Query: 293 PKVILEDTLLTVAMQLLRQ----HNISVLMVVDDCQKAIGIVHFLDLL 336
              +  DT    A+Q L++     +   + VV+D  + +G +   DLL
Sbjct: 381 FSSVTPDT----ALQTLQELIVGRHQRFVPVVEDDGQLVGALTRTDLL 424



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 4/62 (6%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R+ +          +M    K + +   +    ++L ++NI+ + V+D   + +GI+ 
Sbjct: 301 LRRHVNPHWE---ARHIMFSPVKSVQKADTIAQVREILTRYNINAMPVLDGD-RVVGIIT 356

Query: 332 FL 333
             
Sbjct: 357 RQ 358


>gi|15678277|ref|NP_275392.1| hypothetical protein MTH249 [Methanothermobacter thermautotrophicus
           str. Delta H]
 gi|7388382|sp|O26351|Y249_METTH RecName: Full=Uncharacterized protein MTH_249
 gi|2621299|gb|AAB84755.1| conserved protein [Methanothermobacter thermautotrophicus str.
           Delta H]
          Length = 197

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 37/207 (17%), Positives = 68/207 (32%), Gaps = 31/207 (14%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS 75
             +++N+  + A  +I A           +      +    + KI      V I G G+S
Sbjct: 4   MEILRNTVQKIAKHAIEA-----------IDKVDEAELEMMISKIMDASS-VFIVGTGRS 51

Query: 76  GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYAR 135
             IG   A  L   G     V            I  +D +I +S SG +  +      +R
Sbjct: 52  ELIGKAFAMRLMHLGFKVHVVGDVTTP-----AIRDEDCLIAISGSGETKTVTLAAETSR 106

Query: 136 RFSIPLIAITSENKSVVACHADIVLTLPKEPESC------------PHGLAPTTSAIM-- 181
                ++A+T+  +S +  ++D+V+ +P + +                 L P  +     
Sbjct: 107 SVGATVVAVTATPESTLTGYSDVVICIPSKTKEPWKYYTSGVLRGEYDDLTPMGTLFEDS 166

Query: 182 QLAIGDALAIALLESRNFSENDFYVLH 208
                D L    +      E D    H
Sbjct: 167 THLFLDGLIAEFMSILGKREKDLKERH 193


>gi|320011140|gb|ADW05990.1| putative signal transduction protein with CBS domains [Streptomyces
           flavogriseus ATCC 33331]
          Length = 141

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFR---NFHKDL 280
                  +     L  A  ++ +   G + V    E  ++ GIIT+ DI         D 
Sbjct: 8   MHPGAHWIPAHETLDRAAQMMRDHTVGALPVSAGGEKDRMVGIITDRDIVTKCVASGHDP 67

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +T++  ++    P+ I     +   ++ ++   I  L V+ + +K +G++   DL
Sbjct: 68  STVTAGELCDGTPRWIESSADVDAVLETMQSRRIRRLPVI-EDKKLVGMISEADL 121



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
            + +D+M      I     L  A Q++R H +  L V    +  + +GI+   D++
Sbjct: 2   TTAKDIMHPGAHWIPAHETLDRAAQMMRDHTVGALPVSAGGEKDRMVGIITDRDIV 57


>gi|268590265|ref|ZP_06124486.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291314549|gb|EFE55002.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 281

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/152 (21%), Positives = 63/152 (41%), Gaps = 3/152 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S++E SL            +K+   K R+V+ G+G S  + S +   L      + F +
Sbjct: 105 ISAIEKSLDLLEPSVVDTIAQKMFQAK-RIVLFGVGSSAIVASDIFHKLIRINKHALFSY 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +  +DL I ++  G++ E+ ++L  A+    P +A+T   +      AD
Sbjct: 164 DLHVQLSYSANLGPEDLAIAVTARGNTQEINSMLRAAKETGCPTVALTRFGQDEAIKLAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
             L    + +    G+   T  ++Q+   D L
Sbjct: 224 FALPYFYDEQHSQLGII--TPQVLQMITFDTL 253


>gi|222095862|ref|YP_002529919.1| transcriptional regulator, rpir family, putative [Bacillus cereus
           Q1]
 gi|221239920|gb|ACM12630.1| transcriptional regulator, RpiR family, putative [Bacillus cereus
           Q1]
          Length = 134

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/137 (22%), Positives = 55/137 (40%), Gaps = 4/137 (2%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  A +   +    ++ L+ +L          AV+ ++    R+     G SG I     
Sbjct: 2   VTVAKKVFHSH---ITGLQDTLHLLNDTALEQAVKALQEA-NRIEFYRNGGSGIIAMDAY 57

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
                TG        +       G+++++ ++I +S SGS+  L   L  A+     +IA
Sbjct: 58  HKFMRTGISCIAHTDSHFQIMGEGLLSKNSVVIGISHSGSNKGLLEALEVAKARGAKIIA 117

Query: 144 ITSENKSVVACHADIVL 160
           I S  KS +   A+I L
Sbjct: 118 IRSYQKSALIQLAEITL 134


>gi|220922102|ref|YP_002497403.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
 gi|219946708|gb|ACL57100.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
          Length = 148

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/106 (26%), Positives = 47/106 (44%), Gaps = 5/106 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           V     +      L E   G + VV E ++L GII+E D+       H+D     V +VM
Sbjct: 18  VTGNFTVARVCLRLREYGVGAL-VVLEERRLVGIISERDVATRVIAGHRDPMLTLVREVM 76

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            ++P+ I  +  L  A + +       L V+   Q+ IG++   D+
Sbjct: 77  TRDPETIAAEASLAEAYRRMLTGGFRHLPVM-RGQEVIGMISLCDI 121


>gi|91774263|ref|YP_566955.1| CBS domain-containing protein [Methanococcoides burtonii DSM 6242]
 gi|91713278|gb|ABE53205.1| Cystathionine-beta-synthase domain-containing protein
           [Methanococcoides burtonii DSM 6242]
          Length = 283

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 51/96 (53%), Gaps = 6/96 (6%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
           + ++IL +K+   + V+ +  KL GI++      N  K      +  +M+++P  I  D 
Sbjct: 26  EVLSILKDKKVSGLPVI-KDNKLVGIVS----RSNLLKKPTEEQLALLMVRDPISISPDE 80

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            L+VA  +L +H I  L VV++  K +G++   D++
Sbjct: 81  DLSVAAHILLKHGIRRLPVVENE-KLVGLITVADVV 115



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 44/266 (16%), Positives = 84/266 (31%), Gaps = 43/266 (16%)

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLI------AITSENKSVVACHADIVLTLPKEPES 168
           +  +S  GS DE+ +IL   +   +P+I       I S   +++    +  L L    + 
Sbjct: 15  VACISLPGSRDEVLSILKDKKVSGLPVIKDNKLVGIVSR-SNLLKKPTEEQLALLMVRDP 73

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD 228
                    S    + +   +    +           V    G L  L +      +   
Sbjct: 74  ISISPDEDLSVAAHILLKHGIRRLPVVENEKLVGLITVADVVGSLVDLNITTPISEYLNS 133

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------------FR 274
            +  V    PL      +       V V+D    + G+IT+ DI                
Sbjct: 134 GVGPVWYETPLHVVARNMELAHVKAVPVIDTNLDIVGLITDRDIISASVIEDSVEVSNMS 193

Query: 275 NFHKD----------------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
               D                      + ++ V+DVM+K       +  ++     ++++
Sbjct: 194 AGADDDEWTWESMRDTMSIYYSVSRIKVPSVPVKDVMVKELISASSNMGVSECALKMKRN 253

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            I  + VV   QK IG++    LL+ 
Sbjct: 254 RIDQVPVVSANQKFIGLLRDRYLLKA 279



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 46/109 (42%), Gaps = 1/109 (0%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L  A  IL +     + VV E +KL G+IT  D+  +      T  + + +   
Sbjct: 76  ISPDEDLSVAAHILLKHGIRRLPVV-ENEKLVGLITVADVVGSLVDLNITTPISEYLNSG 134

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
              +  +T L V  + +   ++  + V+D     +G++   D++   +I
Sbjct: 135 VGPVWYETPLHVVARNMELAHVKAVPVIDTNLDIVGLITDRDIISASVI 183



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M+K+   I         + +L+   +S L V+    K +GIV   +LL+ 
Sbjct: 7   VRDIMVKDVACISLPGSRDEVLSILKDKKVSGLPVI-KDNKLVGIVSRSNLLKK 59


>gi|308067159|ref|YP_003868764.1| transcriptional regulator [Paenibacillus polymyxa E681]
 gi|305856438|gb|ADM68226.1| Putative HTH-type transcriptional regulator [Paenibacillus polymyxa
           E681]
          Length = 279

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/137 (24%), Positives = 52/137 (37%), Gaps = 2/137 (1%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
               G V   G+G SG       +     G  +  V            +   D+ I +S 
Sbjct: 125 LDQAGYVQFFGVGASGISAQDAKNRFLRIGRRAEAVADGHIQSMMAVSMNPGDVAIGISV 184

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SGS+ +   +L+ A++    +IAIT+  KS +   ADIVL    +      G     + I
Sbjct: 185 SGSTLDTNDMLHKAKQNGATVIAITNYAKSPITSIADIVLLTAGKEAPIEGGSI--GAKI 242

Query: 181 MQLAIGDALAIALLESR 197
            QL + D +   L    
Sbjct: 243 SQLFVIDLICEGLARKH 259


>gi|237799898|ref|ZP_04588359.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. oryzae str. 1_6]
 gi|331022753|gb|EGI02810.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. oryzae str. 1_6]
          Length = 288

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         +V+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQQLDPALISKSVDMLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+   
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARANGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|297192194|ref|ZP_06909592.1| signal-transduction protein [Streptomyces pristinaespiralis ATCC
           25486]
 gi|197720159|gb|EDY64067.1| signal-transduction protein [Streptomyces pristinaespiralis ATCC
           25486]
          Length = 133

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           +     L  A  +++ +R G   V+D    L GI+TE DI  +    +D +  +      
Sbjct: 18  IGPAHTLRQAARLMAARRVGAAVVLDSDSSL-GILTERDILNSVGLGQDPDLETAGTHTT 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V D     +G+V   D++R
Sbjct: 77  TDVVFAAPSWTLEEAADAMTHGGFRHLIVTDGDG-PVGVVSVRDIIR 122



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D      GI+   D+L
Sbjct: 7   VRDAMSTVVLTIGPAHTLRQAARLMAARRVGAAVVLDSDSSL-GILTERDIL 57


>gi|160940530|ref|ZP_02087874.1| hypothetical protein CLOBOL_05425 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436490|gb|EDP14257.1| hypothetical protein CLOBOL_05425 [Clostridium bolteae ATCC
           BAA-613]
          Length = 294

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/166 (16%), Positives = 61/166 (36%), Gaps = 2/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L+ +L          A + I   + R+ I   G+S    + +   L   G       
Sbjct: 117 IQALQDTLTVIDYDALERAADLIARAR-RLCIFAQGRSKVTANSIRLRLHRLGIEGTLYT 175

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                     ++  +D+ + +S  G S  +   +  A      +I +TS   + +   AD
Sbjct: 176 DPHEQAIASSLMGPEDVAVGISTFGRSRSILVSIRRAAARGSSIIGVTSYQNTPLEKEAD 235

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           I+L      +    G  P+ +++ Q+ + D L + + +       +
Sbjct: 236 ILLRT-VNNDEADFGSEPSCASVTQMVMLDCLYMLVAKRMEGKAEE 280


>gi|71906496|ref|YP_284083.1| CBS [Dechloromonas aromatica RCB]
 gi|71846117|gb|AAZ45613.1| CBS protein [Dechloromonas aromatica RCB]
          Length = 149

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/125 (22%), Positives = 55/125 (44%), Gaps = 5/125 (4%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 +   G ++  V    PL  AI  +++   G + VV E  K+ G++T  ++    
Sbjct: 1   MQVREILRVKGGTLYTVTPQQPLAVAIDSMADLDVGSL-VVMEAGKMVGMLTFREVLLAL 59

Query: 277 HKDLNT---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
            +  ++   ++V DVM+ NP     D       +L+ +     L V+D     +G++ FL
Sbjct: 60  RQHASSPDGITVGDVMVANPVTAFPDMEANDLRRLMIEKRSRYLPVIDGD-TLMGVISFL 118

Query: 334 DLLRF 338
           D+ + 
Sbjct: 119 DVAKA 123


>gi|308049677|ref|YP_003913243.1| RpiR family transcriptional regulator [Ferrimonas balearica DSM
           9799]
 gi|307631867|gb|ADN76169.1| transcriptional regulator, RpiR family [Ferrimonas balearica DSM
           9799]
          Length = 284

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 62/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            +++L+S+ Q     Q + AV+ +     ++   G+G S  +     +       P    
Sbjct: 102 SMAALDSARQSINPDQINRAVDMLTQAD-QISFFGLGASSAVAHDALNKFFRFNVPVVSF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                            ++++ S +G +  L  I   A+     +IA+TS+  S +A  A
Sbjct: 161 DDVLMMRMSCINAREGAVLVLFSHTGRTKTLVEIARLAKENHAQVIAVTSK-DSPLAKEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + Q+   D LA      R 
Sbjct: 220 TLAVTMDVPEDTDLY--MPMASRLAQMVAVDVLATGFTLRRG 259


>gi|229163661|ref|ZP_04291609.1| Acetoin utilization protein AcuB [Bacillus cereus R309803]
 gi|228619798|gb|EEK76676.1| Acetoin utilization protein AcuB [Bacillus cereus R309803]
          Length = 214

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 24/50 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +    +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQAVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|123441739|ref|YP_001005723.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           enterocolitica 8081]
 gi|122088700|emb|CAL11505.1| putative LacI-family regulatory protein [Yersinia enterocolitica
           subsp. enterocolitica 8081]
          Length = 246

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RVIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I          +I++T+ + S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIILSVSGETEEIIRIANQFSLQHCKIISLTNSDNSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|294783302|ref|ZP_06748626.1| CBS domain protein [Fusobacterium sp. 1_1_41FAA]
 gi|294480180|gb|EFG27957.1| CBS domain protein [Fusobacterium sp. 1_1_41FAA]
          Length = 199

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + +   + DAI  L     G + VV E +KL GII+  
Sbjct: 56  GYSYNNKCTIIRVKDCMSPQNSIDVKTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 114

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P ++   ED  +  A++ L +H I  L V+  +  K
Sbjct: 115 DLLKATLNKKNIEKTPVSMIMTRMPNIVHCFEDDNIMEAIEKLIKHEIDSLPVLRKENGK 174

Query: 326 A 326
            
Sbjct: 175 L 175



 Score = 36.4 bits (83), Expect = 6.3,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      I   T +  A+  L  +++  L+VV++  K +GI+   DLL+ 
Sbjct: 68  VKDCMSPQN-SIDVKTSVYDAIIHLFNYDLGTLVVVENE-KLVGIISRKDLLKA 119


>gi|284176230|ref|YP_003406507.1| CBS domain containing protein [Haloterrigena turkmenica DSM 5511]
 gi|284017887|gb|ADB63834.1| CBS domain containing protein [Haloterrigena turkmenica DSM 5511]
          Length = 141

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD--IFRNFHKDLNTLSVEDVMIK 291
                L +A   L  +  G + VV E  +  G++T+ D  +  + H D+ +LSVE++M +
Sbjct: 15  SPDSNLEEATQTLENENVGAL-VVTEDDEPVGMLTDRDAALAIHDHDDVGSLSVEEIMAE 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +P  + ED       + +++ N+    +VDD  +  GI    DL+
Sbjct: 74  DPATVHEDDDPLAISEAIKERNVRRFPIVDDDGELAGIATLDDLI 118



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 20/50 (40%), Gaps = 8/50 (16%)

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH-------FLD 334
           N      D+ L  A Q L   N+  L+V +D +  +G++          D
Sbjct: 10  NVVTTSPDSNLEEATQTLENENVGALVVTEDDE-PVGMLTDRDAALAIHD 58


>gi|209525936|ref|ZP_03274470.1| signal transduction histidine kinase [Arthrospira maxima CS-328]
 gi|209493613|gb|EDZ93934.1| signal transduction histidine kinase [Arthrospira maxima CS-328]
          Length = 1049

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 55/136 (40%), Gaps = 18/136 (13%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR-----------FGCVAVVDE 259
                     +D++H       V     L++ + ++S++              CV VV E
Sbjct: 7   KPWFMSTPTLNDIIHRDPLT--VVPNTSLMEVMALMSQEPSDQWGTENFPPNSCVLVV-E 63

Query: 260 GQKLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKV-ILEDTL-LTVAMQLLRQHNIS 315
             KL G+ TE D+ +      N   L V +VM + P V    D L +   +Q L+ H I 
Sbjct: 64  DGKLVGMWTERDVVQLIGAGENPGDLVVSEVMRQPPVVWREADELDIYAIIQQLQIHKIH 123

Query: 316 VLMVVDDCQKAIGIVH 331
            + V+DD     GI+ 
Sbjct: 124 HIPVIDDQDYLTGIIT 139



 Score = 36.0 bits (82), Expect = 8.2,   Method: Composition-based stats.
 Identities = 14/70 (20%), Positives = 34/70 (48%), Gaps = 12/70 (17%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI-----------SVLMVVDDCQKAIG 328
           ++T ++ D++ ++P  ++ +T L   M L+ Q              S ++VV +  K +G
Sbjct: 11  MSTPTLNDIIHRDPLTVVPNTSLMEVMALMSQEPSDQWGTENFPPNSCVLVV-EDGKLVG 69

Query: 329 IVHFLDLLRF 338
           +    D+++ 
Sbjct: 70  MWTERDVVQL 79


>gi|188535401|ref|YP_001909198.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
 gi|188030443|emb|CAO98337.1| Putative transcriptional regulator [Erwinia tasmaniensis Et1/99]
          Length = 283

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/164 (20%), Positives = 65/164 (39%), Gaps = 9/164 (5%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQVNPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFAEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             +D+        E+   G     +++  LA   A+++AL  +R
Sbjct: 239 AFSDVCF---VVREAQVDGFRSQVASLC-LAQTLAVSLALNNAR 278


>gi|73540849|ref|YP_295369.1| CBS [Ralstonia eutropha JMP134]
 gi|72118262|gb|AAZ60525.1| CBS [Ralstonia eutropha JMP134]
          Length = 154

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/119 (22%), Positives = 51/119 (42%), Gaps = 7/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIF---RNFHKD 279
                  + + C L +A   + ++  G + V +    G ++ G++T+ DI         D
Sbjct: 7   CTREPVHIPLSCTLQEAAVQMRDQHVGSLIVTEATASGTRVAGVLTDRDIVLGSTAAGTD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             T  V D+M +    +     +  AMQLL  H +  L V+D  +  IG++   D++  
Sbjct: 67  PCTNQVGDIMTRGLVTVGRHNGVADAMQLLLSHGVRRLGVLD-GEALIGVISMDDIVGA 124



 Score = 35.6 bits (81), Expect = 9.8,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLL 336
           + ++++  + P  I     L  A   +R  ++  L+V +      +  G++   D++
Sbjct: 1   MRIDELCTREPVHIPLSCTLQEAAVQMRDQHVGSLIVTEATASGTRVAGVLTDRDIV 57


>gi|66044370|ref|YP_234211.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. syringae B728a]
 gi|71736151|ref|YP_273454.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. phaseolicola 1448A]
 gi|257487342|ref|ZP_05641383.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. tabaci ATCC 11528]
 gi|289627899|ref|ZP_06460853.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. aesculi str. NCPPB3681]
 gi|289647330|ref|ZP_06478673.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. aesculi str. 2250]
 gi|289678156|ref|ZP_06499046.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. syringae FF5]
 gi|298485859|ref|ZP_07003935.1| HTH-type transcriptional regulator hexR [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|302186079|ref|ZP_07262752.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. syringae 642]
 gi|63255077|gb|AAY36173.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae B728a]
 gi|71556704|gb|AAZ35915.1| transcriptional regulator HexR [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298159548|gb|EFI00593.1| HTH-type transcriptional regulator hexR [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320322860|gb|EFW78951.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. glycinea str. B076]
 gi|320329831|gb|EFW85819.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330867875|gb|EGH02584.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. aesculi str. 0893_23]
 gi|330873043|gb|EGH07192.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. morsprunorum str. M302280PT]
 gi|330874371|gb|EGH08520.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. glycinea str. race 4]
 gi|330890485|gb|EGH23146.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. mori str. 301020]
 gi|330895761|gb|EGH28050.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. japonica str. M301072PT]
 gi|330938984|gb|EGH42461.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. pisi str. 1704B]
 gi|330950920|gb|EGH51180.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           Cit 7]
 gi|330969204|gb|EGH69270.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. aceris str. M302273PT]
 gi|330975755|gb|EGH75821.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. aptata str. DSM 50252]
 gi|330988072|gb|EGH86175.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. lachrymans str. M301315]
 gi|331009055|gb|EGH89111.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. tabaci ATCC 11528]
          Length = 288

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         +V+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQQLDPALISKSVDMLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+   
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARANGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|304315352|ref|YP_003850499.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302588811|gb|ADL59186.1| CBS domain-containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 272

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 49/121 (40%), Gaps = 11/121 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG----QKLKGIITEGDIF------RN 275
             +    +     + DA+ ++ +K    + V++      ++L GI+TE DI       R 
Sbjct: 7   MSEDPVCIDKDQNVCDALRLMGKKNVSRLLVINTNSEHERELVGIVTEKDIAIKLGSSRY 66

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +   +   V  VM         D     A  L+ ++NI  L V+    + +GIV   D+
Sbjct: 67  GNMAPSHFHVSTVMTGELITADPDMDAGNAASLMLENNIGSLPVI-LDGEILGIVTKSDI 125

Query: 336 L 336
           L
Sbjct: 126 L 126



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 11/109 (10%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDLNTLSVEDVM 289
                 +A +++ E   G + V+    ++ GI+T+ DI      R + K     +  DVM
Sbjct: 89  PDMDAGNAASLMLENNIGSLPVI-LDGEILGIVTKSDILDICRGRAYEKY----TAGDVM 143

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +     +  A +++    I  L+V+D   +  GI+   D+ R 
Sbjct: 144 STEMITVSPQERVVHARRMMIDAGIGRLLVMD-GGELAGILTAKDMTRA 191



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 15/123 (12%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
               +  V     ++ A  ++ +   G + V+D G +L GI+T  D+ R           
Sbjct: 143 MSTEMITVSPQERVVHARRMMIDAGIGRLLVMD-GGELAGILTAKDMTRAVINFRKVVPD 201

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                 +  L VED+M +N + +  DT +T    ++ +       VVD   +  GIV   
Sbjct: 202 KHKPSRIRNLLVEDIMKQNVRTVEADTPVTDLASMMMETGYGGFPVVD--GELEGIVTKT 259

Query: 334 DLL 336
           D+L
Sbjct: 260 DIL 262



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 5/60 (8%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD----DCQKAIGIVHFLDL-LRFG 339
           ++++M ++P  I +D  +  A++L+ + N+S L+V++      ++ +GIV   D+ ++ G
Sbjct: 3   IKNIMSEDPVCIDKDQNVCDALRLMGKKNVSRLLVINTNSEHERELVGIVTEKDIAIKLG 62



 Score = 39.5 bits (91), Expect = 0.86,   Method: Composition-based stats.
 Identities = 16/71 (22%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 203 DFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK 262
           +F  + P     +             ++  V+   P+ D  +++ E  +G   VVD   +
Sbjct: 194 NFRKVVPDKHKPSRIRNLLVEDIMKQNVRTVEADTPVTDLASMMMETGYGGFPVVD--GE 251

Query: 263 LKGIITEGDIF 273
           L+GI+T+ DI 
Sbjct: 252 LEGIVTKTDIL 262


>gi|300717178|ref|YP_003741981.1| hypothetical protein [Erwinia billingiae Eb661]
 gi|299063014|emb|CAX60134.1| Conserved uncharacterized protein [Erwinia billingiae Eb661]
          Length = 371

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 1/78 (1%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           +   L+ I+++ +  R   +    L   D M +    I  D     A  LLRQH I VL 
Sbjct: 215 DEGDLQAILSQAE-QRAHRRHFGGLRCADFMTRELWTIEPDASCHEAGSLLRQHRIDVLP 273

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VV    + +GIV   DLL
Sbjct: 274 VVSKAGELLGIVTSRDLL 291



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 11/113 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVM 289
           ++      +A ++L + R   + VV +  +L GI+T  D+  +  +   DL T  +  VM
Sbjct: 251 IEPDASCHEAGSLLRQHRIDVLPVVSKAGELLGIVTSRDLLADAERRPDDLATHPISQVM 310

Query: 290 -IKNPKVILEDTLLTVAMQL---LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               P+   +D      + L   L+    S  +V+D   K +G+V   D+L  
Sbjct: 311 CTAFPRCAPDD--AVEQLVLPFTLQSMQCS--LVIDPAGKLVGLVTASDVLAA 359


>gi|78188109|ref|YP_378447.1| CBS [Chlorobium chlorochromatii CaD3]
 gi|78170308|gb|ABB27404.1| CBS [Chlorobium chlorochromatii CaD3]
          Length = 148

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                 ++K  C + +A+ ++ + R   + V         G++TE DI           H
Sbjct: 16  MQKDFHVIKGSCTVAEALQLMKQTRESGLIVEPRNEDDCYGMVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  VM K    +     +  A++++++ N+  L V+ +  K IG+++  D+L 
Sbjct: 76  RDPWNTPVFQVMSKPVISVNPSLRIKYALRMMKRTNVRRLTVM-EGNKVIGVLNMADVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135



 Score = 36.8 bits (84), Expect = 5.0,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L TL V  +M K+  VI     +  A+QL++Q   S L+V   +     G+V   D+L
Sbjct: 7   LRTLPVSALMQKDFHVIKGSCTVAEALQLMKQTRESGLIVEPRNEDDCYGMVTEKDIL 64


>gi|89092537|ref|ZP_01165490.1| hypothetical protein MED92_14563 [Oceanospirillum sp. MED92]
 gi|89083049|gb|EAR62268.1| hypothetical protein MED92_14563 [Oceanospirillum sp. MED92]
          Length = 135

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 40/109 (36%), Gaps = 6/109 (5%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLNTLSVEDVM 289
               L +AI  L E R     VVD+   L G+++E D  +       H++     V   M
Sbjct: 20  PETDLFEAINKLLEYRITGAPVVDKDGNLIGLMSEVDCLKAILTLTYHEEEMGGRVGTYM 79

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 I  D  +    +    +    L VV    K IG +   D+LR 
Sbjct: 80  SDEVYTINHDADIIKVAEEFINNKRRRLPVV-KDGKLIGQISRRDVLRA 127



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 29/59 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L ++  +D M ++      +T L  A+  L ++ I+   VVD     IG++  +D L+ 
Sbjct: 2   LRSVKAQDYMCEDLITFTPETDLFEAINKLLEYRITGAPVVDKDGNLIGLMSEVDCLKA 60


>gi|238754869|ref|ZP_04616219.1| Hex regulon repressor [Yersinia ruckeri ATCC 29473]
 gi|238706880|gb|EEP99247.1| Hex regulon repressor [Yersinia ruckeri ATCC 29473]
          Length = 301

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 56/145 (38%), Gaps = 4/145 (2%)

Query: 54  HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           + AV+ +   K ++   G+G S  +     +       P  +                 D
Sbjct: 131 NRAVDLLTQAK-KISFFGLGASAAVAHDAMNKFFRFNIPVIYFDDVVMQRMSCMNSGEGD 189

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           +++++S +G +  L  +   AR     +IAITS   + +A  A + L L    ++  +  
Sbjct: 190 VVVLISHTGRTKNLVEMARLARDNDATVIAITSR-DTPLAAKATLPLILDVPEDTDVY-- 246

Query: 174 APTTSAIMQLAIGDALAIALLESRN 198
            P  S I QL + D LA      R 
Sbjct: 247 MPMVSRIAQLTLIDVLATGFTLRRG 271


>gi|28868509|ref|NP_791128.1| Hex regulon repressor [Pseudomonas syringae pv. tomato str. DC3000]
 gi|28851747|gb|AAO54823.1| Hex regulon repressor [Pseudomonas syringae pv. tomato str. DC3000]
 gi|330963146|gb|EGH63406.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. actinidiae str. M302091]
 gi|331015201|gb|EGH95257.1| DNA-binding transcriptional regulator HexR [Pseudomonas syringae
           pv. lachrymans str. M302278PT]
          Length = 288

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 72/169 (42%), Gaps = 18/169 (10%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+S+ Q         +V+ +   + ++   G+G S  +               F  
Sbjct: 106 AIASLDSACQQLDPALVSKSVDMLIQAR-QIHFFGLGASAPVALDAQHKF-------FRF 157

Query: 97  HAAEASHGDLGMIT-------RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           + A  +H D+ M           +L +++S++G + EL  +   AR     ++ +T+   
Sbjct: 158 NLAVTAHADVLMQRMIASVAHTGELFVIISYTGRTRELVEVARIARANGASVLGLTA-AG 216

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  + + L +P   ++  +   P TS I+QL + D LA  +   R 
Sbjct: 217 SPLAQASTVSLNIPLPEDTDIY--MPMTSRIIQLTVLDVLATGMTLRRG 263


>gi|329296203|ref|ZP_08253539.1| sugar isomerase (SIS) [Plautia stali symbiont]
          Length = 186

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 40/181 (22%), Positives = 66/181 (36%), Gaps = 19/181 (10%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  + Q     Q    + +I++ K  + + G G+SG      A+ L   G     V 
Sbjct: 11  LTELAHNAQQIDESQAQALIAQIRSAK-HIFLQGAGRSGIAIRAFANRLLHLGFSVSLVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LKA+   A    + +  IT +  S +   A 
Sbjct: 70  EISSHHS-----RPGDLLIIGSGSGETASLKALALNAVERGVDVALITMKADSGIGRLAK 124

Query: 158 IVLTLP----------KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            VL LP              S P G A      +     DA+ + ++     +    +  
Sbjct: 125 CVLVLPGTVKTDNARSVGRFSQPMGSAFEQ---LCFITCDAIVLEIMHQCGETSESMFSR 181

Query: 208 H 208
           H
Sbjct: 182 H 182


>gi|322385592|ref|ZP_08059236.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
 gi|321270330|gb|EFX53246.1| CBS domain protein [Streptococcus cristatus ATCC 51100]
          Length = 211

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 5/115 (4%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSV 285
             S  LV     + DA+  L       + V+DE + L GI++  D+ R      + T  +
Sbjct: 81  MVSPVLVPQDTFIQDAVIRLFMYDADVLYVIDEKKLLLGIVSRKDLLRAALSSSIGTTPI 140

Query: 286 EDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIVHFLDLL 336
              M + P  +   +D  +     LL+   I  L VV  D+ +K +G V    LL
Sbjct: 141 AVCMTRMPHLRTCHKDMNILEVAALLQDFAIDSLPVVEKDNERKILGTVTKTALL 195



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+   F  D      ED+M  +P ++ +DT +  A+  L  ++  VL V+D+ +  +GIV
Sbjct: 63  DLETLFFFDTFRKKAEDIM-VSPVLVPQDTFIQDAVIRLFMYDADVLYVIDEKKLLLGIV 121

Query: 331 HFLDLLRFGI 340
              DLLR  +
Sbjct: 122 SRKDLLRAAL 131


>gi|311031645|ref|ZP_07709735.1| N-terminal HTH domain arsR family and two C-terminal CBS domains
           [Bacillus sp. m3-13]
          Length = 165

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/141 (20%), Positives = 59/141 (41%), Gaps = 7/141 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L +  +    V        +V     + DAI  +  +  G + VVD    +
Sbjct: 14  FYTGKTGSQLLSDKINKIQVNDHQSIPVVVHESVSVYDAICTMFLEDVGTLFVVDNFSII 73

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P V    ++ L+    + L +  I  L V
Sbjct: 74  VGVLSRKDLLRASIGKQELTSIPVNIIMTRMPNVTYCFKEDLIIDVAKKLIEKQIDALPV 133

Query: 320 V---DDCQKAIGIVHFLDLLR 337
           V   D   + +G +   ++ +
Sbjct: 134 VKQTDKGYEVVGRITKTNITK 154



 Score = 39.5 bits (91), Expect = 0.84,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 24/48 (50%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P V+ E   +  A+  +   ++  L VVD+    +G++   DLLR  I
Sbjct: 40  PVVVHESVSVYDAICTMFLEDVGTLFVVDNFSIIVGVLSRKDLLRASI 87


>gi|269218581|ref|ZP_06162435.1| integral membrane transporter with CBS domain [Actinomyces sp. oral
           taxon 848 str. F0332]
 gi|269211692|gb|EEZ78032.1| integral membrane transporter with CBS domain [Actinomyces sp. oral
           taxon 848 str. F0332]
          Length = 415

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGD-IFRNFH 277
             +VM     +  + I  PL  A+++ +   F  V VV E    L G++   D + R   
Sbjct: 193 VREVMVPRTDMVSIGIDAPLDKAMSLFTRSGFSRVPVVGESADDLHGVVYLKDVLRRWLR 252

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  +L+V D+M + P  + E  ++   M+ ++ + + + +VVD+     G+V   DL+ 
Sbjct: 253 GNTESLTVADLM-REPVFVPETKVVDDLMREMQANQVHIALVVDEYGGIAGLVTIEDLVE 311

Query: 338 F 338
            
Sbjct: 312 E 312


>gi|326693846|ref|ZP_08230851.1| transcriptional regulator [Leuconostoc argentinum KCTC 3773]
          Length = 283

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 34/159 (21%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
               ++L ++L    +     A   + A + RV   GIG S  +          T     
Sbjct: 103 AGATNALHATLNHLTADDLETASGYLIAAR-RVGFFGIGGSSIVAFNAYHKFLRTPLDVI 161

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                +        +  DD  +V+S SG + +   +    ++  + +IAITS   S +A 
Sbjct: 162 AHPDYDIQLMQAVKLDHDDAAVVISHSGRNKDTLLVAQKLKQNGVKVIAITSFADSPLAK 221

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
            AD+VL      E         +S I Q+ + D L   +
Sbjct: 222 IADLVLL--SLAEEINFRSESMSSLIAQITLIDTLFTLV 258


>gi|242082347|ref|XP_002445942.1| hypothetical protein SORBIDRAFT_07g028460 [Sorghum bicolor]
 gi|241942292|gb|EES15437.1| hypothetical protein SORBIDRAFT_07g028460 [Sorghum bicolor]
          Length = 751

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 33/159 (20%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKG 265
            H G     + +    V  +     L V     + +   ++ EK+  CV VVD    L+G
Sbjct: 562 YHYGSNNEEMLLDDLKVSQAMTKHYLKVTATFTIEETTRLMQEKQQSCVVVVDNEDFLEG 621

Query: 266 IITEGDIFRNF---------------HKDLNTLSVEDVMIKNP---------KVILEDTL 301
           I+T GD+ R                   D N+  V   + +                DT 
Sbjct: 622 IVTLGDLRRKGFVPSENSDSTQANSSTLDANSSLVSSCLTRGFQFHGNERGLVTCFPDTD 681

Query: 302 LTVAMQLLRQHNISVLMVV--------DDCQKAIGIVHF 332
           L+ A  L+    I  L VV        D  +K +G++H+
Sbjct: 682 LSTAKVLMEVKGIKQLPVVKRGAGRRNDGRRKVLGLLHY 720



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 29/62 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K+   +     +    +L+++   S ++VVD+     GIV   DL R G
Sbjct: 573 LDDLKVSQAMTKHYLKVTATFTIEETTRLMQEKQQSCVVVVDNEDFLEGIVTLGDLRRKG 632

Query: 340 II 341
            +
Sbjct: 633 FV 634


>gi|284032350|ref|YP_003382281.1| IMP dehydrogenase family protein [Kribbella flavida DSM 17836]
 gi|283811643|gb|ADB33482.1| IMP dehydrogenase family protein [Kribbella flavida DSM 17836]
          Length = 478

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 13/182 (7%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P  +A M    G  +A  +      +    D     P   +  + 
Sbjct: 31  LDVDLSTGDGSGTSIPVVAANMTAVSGRRMAETMARCGGLAAIPQDI----PVEVVTEVV 86

Query: 218 VCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                  H+    PLV      + +A+ +L ++  G V VV E  +  G++T+ D     
Sbjct: 87  GWIKQ-RHTIYDTPLVMTPHGTVGEALNLLPKRGHGAVIVV-EQGRAVGVVTDADC---- 140

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                   ++ VM +    +        A   L      +  VVD   + +GI+     L
Sbjct: 141 EGVDRYTQLDAVMSRELLTLPAGIAAEQAFDQLHGGRHRLAPVVDGEGRIVGILTRQRAL 200

Query: 337 RF 338
           R 
Sbjct: 201 RA 202


>gi|71895387|ref|NP_001025772.1| inosine-5'-monophosphate dehydrogenase 2 [Gallus gallus]
 gi|60098399|emb|CAH65030.1| hypothetical protein RCJMB04_1j11 [Gallus gallus]
          Length = 514

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 62/178 (34%), Gaps = 23/178 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIA+           N +   F                     
Sbjct: 62  KTPLVSSPMDTVTEAGMAIAMALTGGIGFIHHNCTPE-FQANE--------VRKVKKYEQ 112

Query: 226 SGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
              + P+V      + D     +   F  + + D G    KL GII+  DI     +  +
Sbjct: 113 GFITDPVVLSPNDRVRDVFEAKARHGFCGIPITDNGKMGGKLVGIISSRDI-DFLKESEH 171

Query: 282 TLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + ++M K  +  V     +L  A ++L++     L +V++  + + I+   DL +
Sbjct: 172 DLPLGEIMTKREDLVVAPSGVMLKEANEILQRSKKGKLPIVNEDDELVAIIARTDLKK 229


>gi|332973111|gb|EGK11046.1| RpiR family transcriptional regulator [Desmospora sp. 8437]
          Length = 283

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/148 (23%), Positives = 60/148 (40%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A E +   + ++ + G+G S  I S L   L+             A       +T
Sbjct: 119 EEVTQAAEMMSTAR-KIDVYGVGASAVIASDLKQKLSRINWWCEAHSDFHAQLTSAVTLT 177

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+   +S+SG ++ +   L  A+R    LI++T   KS V+  ADI L      +   
Sbjct: 178 ERDVAFGISYSGETEVIIQSLTEAKRQGATLISLTKFGKSPVSDAADIRLFTSSVEQDIR 237

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
            G     S I QL + D L + ++   +
Sbjct: 238 SGA--MASRIAQLNVIDVLFVTIVSQLH 263


>gi|332797966|ref|YP_004459466.1| paired CBS domain-containing protein [Acidianus hospitalis W1]
 gi|332695701|gb|AEE95168.1| paired CBS domain protein [Acidianus hospitalis W1]
          Length = 268

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 48/121 (39%), Gaps = 5/121 (4%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFH 277
               +       +     LI+A+  L EK    + VV+E  K++G +T  D+        
Sbjct: 130 KTEEYMTSPAITISKSDSLINAVKTLVEKDVSRLIVVNED-KIEGQLTTTDLLYMTPAIK 188

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                ++V +VM  N  V+     L  A +L+    I  + VV    K  G++   D+ R
Sbjct: 189 YKECKINVSEVMSPNIIVVDAGEDLASAAKLMASRKIKGIPVV-KGDKLSGVITTTDVTR 247

Query: 338 F 338
            
Sbjct: 248 A 248



 Score = 56.4 bits (135), Expect = 6e-06,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 59/133 (44%), Gaps = 4/133 (3%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
           +V   G ++    V  S+VM        V      ++A  I+ +K+   + V  +  K  
Sbjct: 52  FVYEKGEEISFDKVYVSEVMRKDIVC--VNESIDPLEAAEIMIDKKQPLLVVCSDDGKAL 109

Query: 265 GIITEGDIFRNFHKDLNTL-SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
           G+I + D+ + +   +  L   E+ M      I +   L  A++ L + ++S L+VV++ 
Sbjct: 110 GMIIKSDLTQYYASQIRGLQKTEEYMTSPAITISKSDSLINAVKTLVEKDVSRLIVVNED 169

Query: 324 QKAIGIVHFLDLL 336
            K  G +   DLL
Sbjct: 170 -KIEGQLTTTDLL 181



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 47/117 (40%), Gaps = 6/117 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-----HKDLN 281
             SI L      L     ++ E     + V DE     G +T+ DI +           +
Sbjct: 5   RSSIILRPYDTLLYATKIMIMEYVPKAI-VTDEKGFPLGALTQKDIIKFVYEKGEEISFD 63

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V +VM K+   + E      A +++      +L+V  D  KA+G++   DL ++
Sbjct: 64  KVYVSEVMRKDIVCVNESIDPLEAAEIMIDKKQPLLVVCSDDGKALGMIIKSDLTQY 120



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 3/81 (3%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +  D   + P  K     +  S+VM    +I +V  G  L  A  +++ ++   + VV 
Sbjct: 175 LTTTDLLYMTPAIKYKECKINVSEVM--SPNIIVVDAGEDLASAAKLMASRKIKGIPVV- 231

Query: 259 EGQKLKGIITEGDIFRNFHKD 279
           +G KL G+IT  D+ R    D
Sbjct: 232 KGDKLSGVITTTDVTRALLDD 252


>gi|223985492|ref|ZP_03635551.1| hypothetical protein HOLDEFILI_02857 [Holdemania filiformis DSM
           12042]
 gi|223962581|gb|EEF67034.1| hypothetical protein HOLDEFILI_02857 [Holdemania filiformis DSM
           12042]
          Length = 364

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/156 (16%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 43  SSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS 102
            +++           +KI   +  VV  G+  SG I        +  G P  + +     
Sbjct: 192 ETVRTNPVEHIEKLADKILNCR-HVVFLGVQFSGIIAYDAHLRFSRLGIPCKYFNTECDI 250

Query: 103 HGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTL 162
                     D++I+ S+SG +  +     + R     L ++T    + +   +D+ L +
Sbjct: 251 LTYSYFADPQDVVIIFSYSGKTAVILEAADHIRGKGTFLASVTKNYNNELLEISDLHLYI 310

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
                  P      +S I  L + D +   L+  ++
Sbjct: 311 --NSIDDPENNLSLSSRIAALCLVDMIYAVLVNKKS 344


>gi|94313693|ref|YP_586902.1| putative RpiR family transcriptional regulator [Cupriavidus
           metallidurans CH34]
 gi|93357545|gb|ABF11633.1| putative transcriptional regulator of the RpiR family [Cupriavidus
           metallidurans CH34]
          Length = 301

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/159 (24%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
                 L++LE + +     +   A   +   +        G S  +  +    LA  G 
Sbjct: 103 RIHADVLATLEVNRKLIDPERIDIAARLLLNARMVYAFGMGGGSTFMADEARYRLARLGH 162

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           P    H A         +TRDD+++  S SGS  E+ A    AR +   LIA+T+   S 
Sbjct: 163 PVATYHDALLQKMVAATLTRDDVVLAFSASGSVPEILASCDIAREYGARLIAVTA-LGSP 221

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +A  AD++L  P           P+ S    L + D L+
Sbjct: 222 LAARADVLL--PVRTLETDFIFKPSASRYAMLMVLDVLS 258


>gi|16764484|ref|NP_460099.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|167995128|ref|ZP_02576218.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168237195|ref|ZP_02662253.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|194737668|ref|YP_002114124.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. CVM19633]
 gi|197264458|ref|ZP_03164532.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|204930893|ref|ZP_03221766.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|16419643|gb|AAL20058.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|194713170|gb|ACF92391.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Schwarzengrund str. CVM19633]
 gi|197242713|gb|EDY25333.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|197289844|gb|EDY29205.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Schwarzengrund str. SL480]
 gi|204320352|gb|EDZ05556.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Javiana str. GA_MM04042433]
 gi|205327130|gb|EDZ13894.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|261246340|emb|CBG24149.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267992889|gb|ACY87774.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301157669|emb|CBW17161.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312912115|dbj|BAJ36089.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|321223742|gb|EFX48805.1| Sialic acid utilization regulator, RpiR family [Salmonella enterica
           subsp. enterica serovar Typhimurium str. TN061786]
 gi|322616498|gb|EFY13407.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315996572]
 gi|322619750|gb|EFY16625.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-1]
 gi|322622555|gb|EFY19400.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-3]
 gi|322629706|gb|EFY26481.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 495297-4]
 gi|322632574|gb|EFY29320.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-1]
 gi|322636931|gb|EFY33634.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 515920-2]
 gi|322641531|gb|EFY38169.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 531954]
 gi|322644832|gb|EFY41366.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. NC_MB110209-0054]
 gi|322649696|gb|EFY46127.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. OH_2009072675]
 gi|322654004|gb|EFY50327.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. CASC_09SCPH15965]
 gi|322658537|gb|EFY54799.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 19N]
 gi|322663394|gb|EFY59596.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 81038-01]
 gi|322670128|gb|EFY66268.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. MD_MDA09249507]
 gi|322674807|gb|EFY70898.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 414877]
 gi|322676722|gb|EFY72789.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 366867]
 gi|322682645|gb|EFY78664.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 413180]
 gi|322686325|gb|EFY82307.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 446600]
 gi|323195717|gb|EFZ80893.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609458-1]
 gi|323199865|gb|EFZ84954.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556150-1]
 gi|323202858|gb|EFZ87894.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 609460]
 gi|323209128|gb|EFZ94065.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 507440-20]
 gi|323212410|gb|EFZ97228.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 556152]
 gi|323217912|gb|EGA02627.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB101509-0077]
 gi|323222199|gb|EGA06583.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB102109-0047]
 gi|323226768|gb|EGA10960.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB110209-0055]
 gi|323229714|gb|EGA13837.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. MB111609-0052]
 gi|323232939|gb|EGA17035.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009083312]
 gi|323240674|gb|EGA24716.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 2009085258]
 gi|323242988|gb|EGA27009.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. 315731156]
 gi|323247679|gb|EGA31624.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2009159199]
 gi|323252680|gb|EGA36518.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008282]
 gi|323255721|gb|EGA39473.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008283]
 gi|323263542|gb|EGA47068.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008284]
 gi|323266890|gb|EGA50375.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008285]
 gi|323269932|gb|EGA53381.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Montevideo str. IA_2010008287]
 gi|332988019|gb|AEF07002.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 293

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 121 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 180 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 240 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 273


>gi|134293597|ref|YP_001117333.1| CBS domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134136754|gb|ABO57868.1| CBS domain containing protein [Burkholderia vietnamiensis G4]
          Length = 143

 Score = 66.8 bits (162), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V  EG +L  I+T+ D+  R   H      
Sbjct: 8   MSRDVVCVAPNDTIRHAAELMQRFDIGVLPVC-EGGELVAIVTDRDLAIRALSHGHSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V     +  +ED  +    Q +    +  + V+D  ++ +GIV   D+  R G
Sbjct: 67  PVKAVASAPVQWCIEDDGVGDVQQRMADVQLHRMPVLDGQRRVVGIVSLGDIATRAG 123



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 27/51 (52%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +  +  +  A +L+++ +I VL V  +  + + IV   DL
Sbjct: 4   VNEIMSRDVVCVAPNDTIRHAAELMQRFDIGVLPVC-EGGELVAIVTDRDL 53


>gi|283852932|ref|ZP_06370192.1| Polynucleotide adenylyltransferase region [Desulfovibrio sp.
           FW1012B]
 gi|283571690|gb|EFC19690.1| Polynucleotide adenylyltransferase region [Desulfovibrio sp.
           FW1012B]
          Length = 947

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-LKGIITEGDIF-RNFHKDLNTLSVEDVMI 290
           ++    +  A  I++      + V  +G +   G+I E DI  +  +  L  + V + MI
Sbjct: 334 IEETATMRRAEEIMTRYGLKALPVTAKGNRRCVGVI-EHDIMDKAINHGLGDVPVAEYMI 392

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++P V+  +T L   M+++      ++ VV +  +  G+V   DL+
Sbjct: 393 RDPAVVTAETDLYPVMEIILGRRQRLVPVV-EDGRLSGVVTRTDLV 437



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ-KAIGIVHFLDLLRFGI 340
           V  +M K    I E   +  A +++ ++ +  L V      + +G++   D++   I
Sbjct: 323 VRQLMSKPAVSIEETATMRRAEEIMTRYGLKALPVTAKGNRRCVGVIE-HDIMDKAI 378


>gi|221639382|ref|YP_002525644.1| CBS domain-containing protein [Rhodobacter sphaeroides KD131]
 gi|221160163|gb|ACM01143.1| CBS domain containing protein [Rhodobacter sphaeroides KD131]
          Length = 144

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 51/119 (42%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLN 281
            S D +  V  G  +  A  +LS +R G V V  +G++  G+++E DI R   +      
Sbjct: 10  KSDDGVVTVPPGSSIAAAAEVLSSRRIGAVVVSRDGKRPDGMLSERDIVRELGRRGAGCL 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +  VE +M                MQ++ +     L V+    + +G++   D+++  +
Sbjct: 70  SDKVEAIMTSKIVTCACTDEADRIMQVMTEGRFRHLPVM-AEGEMVGLISIGDVVKARL 127


>gi|167587382|ref|ZP_02379770.1| putative transcriptional regulator, XRE family protein
           [Burkholderia ubonensis Bu]
          Length = 154

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L G++T  +I     ++   +  + V  VM
Sbjct: 17  VTPDTPLREAVDTMAEHDIGSL-VVMEYGDLVGMLTFREIILRLRENGGAIGEVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDTPLREAVDTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|331268622|ref|YP_004395114.1| CBS domain-containing protein [Clostridium botulinum BKT015925]
 gi|329125172|gb|AEB75117.1| CBS domain containing protein [Clostridium botulinum BKT015925]
          Length = 432

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 47/113 (41%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     +     I+   +     VVD    + GI+T  D+ +   K+   + +
Sbjct: 194 MISDPIYVNYDDSIQRLKEIIRNTKHQRYPVVDNSMNVVGIVTIKDLQK---KNDEKIFI 250

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M K    + E T +  A  ++    I +  VVD  +K IG+V   D+++ 
Sbjct: 251 KDIMSKELITVTEKTTVAYAAHVMGWEGIELCPVVD-GRKLIGVVSTEDIIKA 302



 Score = 44.1 bits (103), Expect = 0.032,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +ED+MI +P  +  D  +    +++R        VVD+    +GIV   DL + 
Sbjct: 190 IEDIMISDPIYVNYDDSIQRLKEIIRNTKHQRYPVVDNSMNVVGIVTIKDLQKK 243


>gi|218439028|ref|YP_002377357.1| hypothetical protein PCC7424_2061 [Cyanothece sp. PCC 7424]
 gi|218171756|gb|ACK70489.1| protein of unknown function CP12 [Cyanothece sp. PCC 7424]
          Length = 203

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 8/116 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFR---NFHKDL 280
               +  ++    +  A+ ++ EK      VVD    Q   GI+TE DI      + +D 
Sbjct: 7   MTTEVITIRGSATVAQAVKLMREKGI-RTLVVDRRHDQDAYGIVTETDIVYRVTAYGEDP 65

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             + V ++M K   V+  D  +    +L     I    V+ D  + +G++   D+L
Sbjct: 66  KKIRVYEIMSKPCIVVNPDLSVEYVARLFANTGIRFAPVIKD--RLLGVISISDIL 119



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
           +   ++M      I     +  A++L+R+  I  L VVD    Q A GIV   D++
Sbjct: 1   MKASEIMTTEVITIRGSATVAQAVKLMREKGIRTL-VVDRRHDQDAYGIVTETDIV 55


>gi|149369518|ref|ZP_01889370.1| CBS domain protein, putative [unidentified eubacterium SCB49]
 gi|149356945|gb|EDM45500.1| CBS domain protein, putative [unidentified eubacterium SCB49]
          Length = 154

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------LNTLSVED 287
                +++ +++L +K+     VV++  +L GII+EGD  +           +  + V+D
Sbjct: 35  SPDQSVMEVMSVLIKKKISGGPVVNDKNELLGIISEGDCMKEISNSRYHNHPIQDVKVQD 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            M+   + +  +  +  A             ++ +  K +GI+   D+L+  I
Sbjct: 95  HMVTAVETLDGNMNVFDAADKFLSSRRRRFPIL-ENGKLVGIISQKDVLKAAI 146



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 16/69 (23%), Positives = 31/69 (44%)

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           G   +   ++ + + V D M +N      D  +   M +L +  IS   VV+D  + +GI
Sbjct: 8   GKRAKQTKEEKSNIKVSDYMSRNLTTFSPDQSVMEVMSVLIKKKISGGPVVNDKNELLGI 67

Query: 330 VHFLDLLRF 338
           +   D ++ 
Sbjct: 68  ISEGDCMKE 76


>gi|16760004|ref|NP_455621.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Typhi str. CT18]
 gi|29142225|ref|NP_805567.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Typhi str. Ty2]
 gi|62179648|ref|YP_216065.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161614665|ref|YP_001588630.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167552600|ref|ZP_02346352.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|168243931|ref|ZP_02668863.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|168264098|ref|ZP_02686071.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168467582|ref|ZP_02701419.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|168821750|ref|ZP_02833750.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|194445265|ref|YP_002040380.1| RpiR family transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194450499|ref|YP_002045125.1| RpiR family transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|198242183|ref|YP_002215056.1| RpiR family transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|200390857|ref|ZP_03217468.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205352278|ref|YP_002226079.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Gallinarum str. 287/91]
 gi|207856468|ref|YP_002243119.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Enteritidis str. P125109]
 gi|213021619|ref|ZP_03336066.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. 404ty]
 gi|213052731|ref|ZP_03345609.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. E00-7866]
 gi|213428499|ref|ZP_03361249.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. E02-1180]
 gi|213580528|ref|ZP_03362354.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-0664]
 gi|213649136|ref|ZP_03379189.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. J185]
 gi|213852032|ref|ZP_03381564.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. M223]
 gi|224584366|ref|YP_002638164.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Paratyphi C strain RKS4594]
 gi|289830145|ref|ZP_06547576.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. E98-3139]
 gi|25303541|pir||AH0633 probable transcription regulator STY1163 [imported] - Salmonella
           enterica subsp. enterica serovar Typhi (strain CT18)
 gi|16502298|emb|CAD08251.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi]
 gi|29137855|gb|AAO69416.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhi str. Ty2]
 gi|62127281|gb|AAX64984.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. SC-B67]
 gi|161364029|gb|ABX67797.1| hypothetical protein SPAB_02416 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|194403928|gb|ACF64150.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Newport str. SL254]
 gi|194408803|gb|ACF69022.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL476]
 gi|195630065|gb|EDX48717.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Newport str. SL317]
 gi|197936699|gb|ACH74032.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Dublin str. CT_02021853]
 gi|199603302|gb|EDZ01848.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205272059|emb|CAR36904.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Gallinarum str. 287/91]
 gi|205322755|gb|EDZ10594.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205337133|gb|EDZ23897.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Heidelberg str. SL486]
 gi|205341756|gb|EDZ28520.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205347320|gb|EDZ33951.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|206708271|emb|CAR32572.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Enteritidis str. P125109]
 gi|224468893|gb|ACN46723.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi C strain RKS4594]
 gi|320085344|emb|CBY95127.1| Uncharacterized HTH-type transcriptional regulator TTE0211
           [Salmonella enterica subsp. enterica serovar Weltevreden
           str. 2007-60-3289-1]
 gi|322714116|gb|EFZ05687.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Choleraesuis str. A50]
          Length = 293

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 121 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 180 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 240 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 273


>gi|328952646|ref|YP_004369980.1| Cl- channel voltage-gated family protein [Desulfobacca acetoxidans
           DSM 11109]
 gi|328452970|gb|AEB08799.1| Cl- channel voltage-gated family protein [Desulfobacca acetoxidans
           DSM 11109]
          Length = 604

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/114 (23%), Positives = 50/114 (43%), Gaps = 4/114 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSV 285
              + ++    P  + + I++  +     VVD+  K+KGII+  DI       +++ L V
Sbjct: 480 KRPLTIIPENMPFPELVKIVTTSQDYHFPVVDKKGKMKGIISINDIREYILEDNIHGLIV 539

Query: 286 -EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVHFLDLL 336
            +DV   N   +     L  AM  +   N+  L VV +      IG++   D++
Sbjct: 540 AKDVATPNVVRVFLHESLQEAMDKMALINVDELPVVSEDRPDTIIGLITKRDII 593


>gi|288931195|ref|YP_003435255.1| signal transduction protein with CBS domains [Ferroglobus placidus
           DSM 10642]
 gi|288893443|gb|ADC64980.1| putative signal transduction protein with CBS domains [Ferroglobus
           placidus DSM 10642]
          Length = 295

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           H    I        + +A   L+E    C  V  +  KL GI T     + F +      
Sbjct: 177 HMSAPIITSDAEETVKEAAKRLAEHGIYCTPVK-KNDKLVGIFTLDHAVKAFVEGKENEK 235

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           VE VM      + +   L+ A++++R  ++ +L+V D+  K +G++ 
Sbjct: 236 VEKVMRPKIVTVDKRIKLSEALRIMRDEDVRILVVTDN-GKPVGVIT 281


>gi|56413882|ref|YP_150957.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. ATCC 9150]
 gi|197362805|ref|YP_002142442.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Paratyphi A str. AKU_12601]
 gi|56128139|gb|AAV77645.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. ATCC 9150]
 gi|197094282|emb|CAR59790.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Paratyphi A str. AKU_12601]
          Length = 293

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 35/156 (22%), Positives = 55/156 (35%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 121 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ + +S SG+S E    L  AR+     +AIT    S +   AD  L
Sbjct: 180 FMYMQATLLKAGDVAMGVSHSGTSPETVHSLRLARQAGATTVAITHNLGSPLCEEADFCL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 240 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 273


>gi|193213885|ref|YP_001995084.1| putative signal-transduction protein with CBS domains
           [Chloroherpeton thalassium ATCC 35110]
 gi|193087362|gb|ACF12637.1| putative signal-transduction protein with CBS domains
           [Chloroherpeton thalassium ATCC 35110]
          Length = 148

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 13/111 (11%)

Query: 238 PLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNF-------HKDLNTLSVED 287
            + +AI ++  KRF   ++V          GI+TE DI           H+D     V +
Sbjct: 28  TVAEAIQLM--KRFNTSSIVVKPRNEDDTYGIVTEKDILEKVIDPGDDVHRDPWNTPVFE 85

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM K    +  +  L  A++L+++  I  + V+D   K +GI+   D+L  
Sbjct: 86  VMSKPIVSVYPEMRLKYALRLMKRVQIRRVAVLDGD-KLVGILSETDVLHA 135



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV--VDDCQKAIGIVHFLDL 335
           K L  L V  +M K+   I     +  A+QL+++ N S ++V   ++     GIV   D+
Sbjct: 5   KKLRVLPVSALMTKDVVTIDGSKTVAEAIQLMKRFNTSSIVVKPRNEDDTY-GIVTEKDI 63

Query: 336 L 336
           L
Sbjct: 64  L 64



 Score = 36.4 bits (83), Expect = 5.6,   Method: Composition-based stats.
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 205 YVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK 264
            V+ PG  +                I  V     L  A+ ++   +   VAV+D G KL 
Sbjct: 66  KVIDPGDDVHRDPWNTPVFEVMSKPIVSVYPEMRLKYALRLMKRVQIRRVAVLD-GDKLV 124

Query: 265 GIITEGDIFRNFHK 278
           GI++E D+     +
Sbjct: 125 GILSETDVLHAVEE 138


>gi|305431617|ref|ZP_07400787.1| nucleotidyltransferase [Campylobacter coli JV20]
 gi|304445316|gb|EFM37959.1| nucleotidyltransferase [Campylobacter coli JV20]
          Length = 341

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 1/104 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNP 293
               + +A+ I+ ++R     +VD+  K  G+I++ +I +          S++D+  KNP
Sbjct: 10  PDSSIKEALKIVGQERVRLGIIVDKKDKFLGVISDSNIRKALISGKTLKDSIKDIYTKNP 69

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I E+T     +++  + +I    V+D+  + + I     LL+
Sbjct: 70  ITIKENTSKEQLLRISAKTDIYDFPVLDEKGQILSIKSVSSLLK 113


>gi|192359304|ref|YP_001982569.1| inosine-5'-monophosphate dehydrogenase [Cellvibrio japonicus
           Ueda107]
 gi|190685469|gb|ACE83147.1| inosine-5'-monophosphate dehydrogenase [Cellvibrio japonicus
           Ueda107]
          Length = 491

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSG----D 228
             P  SA M       LAIA+ +          ++H    +         V         
Sbjct: 41  NIPLISAAMDTVTEARLAIAIAQEGGIG-----IIHKSMPIEQQAAEVRAVKKFEAGVVK 95

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
               +     + + I +  +     V V+     L GI+T  D+   F  +L   SV  +
Sbjct: 96  DPITIDSEATIRELIALTRKNNISGVPVL-HKGDLVGIVTGRDVR--FETNL-DASVSSI 151

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M        + E         LL +H I  ++VV+D  +  G++   D+ + 
Sbjct: 152 MTPKNQLVTVKEGFTPEEVRNLLHKHRIEKVLVVNDKFELRGLITVKDINKA 203


>gi|86158851|ref|YP_465636.1| signal transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775362|gb|ABC82199.1| putative signal transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 149

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 49/125 (39%), Gaps = 13/125 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
              +   ++    +I+AI +L EK    + V+    +L G++TE  +F            
Sbjct: 12  MTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVTEKMLFGYMPAKATTLDQ 70

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
              H  L+   V   M   P  +  DT L  A +LL    ++ ++VV       G++   
Sbjct: 71  WELHYLLSKTPVRAAMNPAPHTVHPDTPLAEAARLLHDRKLNGVIVVSAQGDLEGLLTTT 130

Query: 334 DLLRF 338
           + L  
Sbjct: 131 NALEA 135



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            L+V D M KNP  I +++ +  A+ LL++ NI  L V+    + +G+V 
Sbjct: 5   KLTVGDWMTKNPITIEDESSVIEAIHLLKEKNIRRLPVM-RQGRLVGLVT 53


>gi|89093015|ref|ZP_01165966.1| CBS domain containing membrane protein [Oceanospirillum sp. MED92]
 gi|89082665|gb|EAR61886.1| CBS domain containing membrane protein [Oceanospirillum sp. MED92]
          Length = 205

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 52/123 (42%), Gaps = 8/123 (6%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                  +VMH+     L+    P  +A+  ++ ++     V+++  +  G++    I  
Sbjct: 67  EQICHVHEVMHTEYL--LINDDLPFHEALVKMTAEQVHAAPVINQQGRFIGVLDALSIIE 124

Query: 275 NFHK---DLNTLSVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
              +   DL  L +  V   M  +    +  T +    Q+++ +N+ ++ VVD  +  +G
Sbjct: 125 RLAQPEADLAELRISQVRNCMTADAITTVPVTSIRRVAQVMQAYNLEIVPVVDQFEIVVG 184

Query: 329 IVH 331
           +V 
Sbjct: 185 VVT 187


>gi|167463610|ref|ZP_02328699.1| hypothetical protein Plarl_13824 [Paenibacillus larvae subsp.
           larvae BRL-230010]
          Length = 248

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 66/168 (39%), Gaps = 4/168 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   A+E +   + ++ + GIG S  I       L          +  ++       +  
Sbjct: 84  ELDRAIEVLGGAR-KITLFGIGASAVIAQDFKQKLTRINRWCEAAYDFDSQATLAANLQE 142

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D ++ +S+SG++ ++   +  A+     LI++T    + VA  A I L      +S   
Sbjct: 143 KDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNPVAEQAHIRLFTSSLEKSIRS 202

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           G     S I QL + D L + +   +N+ EN   + +    +  +   
Sbjct: 203 GA--MASRIAQLNVIDILYVGIA-RQNYEENILALENTRKAVKMMNRH 247


>gi|171687639|ref|XP_001908760.1| hypothetical protein [Podospora anserina S mat+]
 gi|170943781|emb|CAP69433.1| unnamed protein product [Podospora anserina S mat+]
          Length = 533

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 31/172 (18%), Positives = 57/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       +AI +            V+H              V         
Sbjct: 71  KTPLVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSPQAQADFVRKVKRYENGFIL 125

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
              ++     + +A  +  +  FG   V + G+   KL GI+T  DI     +D     +
Sbjct: 126 DPVVISRETTVGEAKALKEKWGFGGFPVTESGKLGSKLLGIVTNRDIQF---EDDFEKPI 182

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM+ +     +   L  A ++L       L +VD     + ++   DL +
Sbjct: 183 SEVMVTDLITAHDGVDLLEANKILAASKKGKLPIVDSDGNLVSMISRSDLTK 234


>gi|71159397|sp|Q9S0X3|PHI_METAM RecName: Full=3-hexulose-6-phosphate isomerase; AltName:
           Full=6-phospho-3-hexuloisomerase; Short=PHI
 gi|5706383|dbj|BAA83098.1| 6-phospho-3-hexuloisomerase [Methylomonas aminofaciens]
          Length = 181

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 38/176 (21%), Positives = 67/176 (38%), Gaps = 12/176 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S L + +           +  + A  GR  I G G+S  +    A  L   G     V 
Sbjct: 9   VSKLTNVINNTAEGYDDKILSLVDAA-GRTFIGGAGRSLLVSRFFAMRLVHAGYQVSMVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL IV+S SGS++ L  ++  A+     +I I+ + +S +A  AD
Sbjct: 68  EVVTP-----SIQAGDLFIVISGSGSTETLMPLVKKAKSQGAKIIVISMKAQSPMAELAD 122

Query: 158 IVLTLP---KEPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
           +V+ +           HG+ P  +          +A    L++ +  +E     +H
Sbjct: 123 LVVPVGGNDANAFDKTHGM-PMGTIFELSTLWFLEATIAKLVDQKGLTEEGMRAIH 177


>gi|325959952|ref|YP_004291418.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
 gi|325331384|gb|ADZ10446.1| putative signal transduction protein with CBS domains
           [Methanobacterium sp. AL-21]
          Length = 278

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 20/120 (16%), Positives = 53/120 (44%), Gaps = 8/120 (6%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNF 276
           +   ++M        V       +A+ I+ +K+   + VV +   +L G++T  D+    
Sbjct: 1   MLVKEIMAKDIISVHVPGNR--ANALEIMRKKKVSGLPVVKNGTDQLVGVLTRTDLV--- 55

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++ +   +  +M ++      D  +    + +  +NI  + +V++  + +G+V   DL+
Sbjct: 56  -ENPDEEQIALIMTRDIITASPDDSVKTVAEKMINNNIRRIPIVEE-GRLVGLVTASDLV 113



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 55/162 (33%), Gaps = 33/162 (20%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              L  + +      +   +IP    G PL  A  I+   R   +  ++   KL GI+TE
Sbjct: 114 NKALWKMEIQEPAEDYMIQNIPTSWEGTPLNVAFEIMRYYRLKVLLGLNNDGKLTGILTE 173

Query: 270 GDIF--------RNFHK-------------------------DLNTLSVEDVMIKNPKVI 296
            D          R  H                            +   ++DV   +  ++
Sbjct: 174 TDFIEESEVVSERTVHNTSVGTEGDKWSWDSKSVLYVIKNHLKFSDKKIKDVANTDLVIV 233

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              T +      +RQ NI  + V+D     +G+V  +DL++ 
Sbjct: 234 TTKTSVQECANKMRQRNIEQIPVIDVEGDLVGLVRAVDLIKA 275



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 2/106 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIKN 292
                +      +       + +V E  +L G++T  D+  +   K       ED MI+N
Sbjct: 75  SPDDSVKTVAEKMINNNIRRIPIV-EEGRLVGLVTASDLVNKALWKMEIQEPAEDYMIQN 133

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                E T L VA +++R + + VL+ +++  K  GI+   D +  
Sbjct: 134 IPTSWEGTPLNVAFEIMRYYRLKVLLGLNNDGKLTGILTETDFIEE 179


>gi|260465443|ref|ZP_05812633.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
 gi|259029747|gb|EEW31033.1| transcriptional regulator, RpiR family [Mesorhizobium opportunistum
           WSM2075]
          Length = 275

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 62/160 (38%), Gaps = 3/160 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            + SL  + Q  +      A  ++ A    +   GI  S      LA  +   G  S  +
Sbjct: 99  AIISLRETEQLIVREDIAKAARQLLAATA-IDCFGIAASAITAQYLAYKMTRIGKLSRAL 157

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             A  +    G   +  + +V+S SGS+ +   I   AR     +I I++ +KS +    
Sbjct: 158 GDAHLAVMAAGTTQKGTVQVVISSSGSTIDAVRIAELARSQGAFVIGISNRSKSPLVAAC 217

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           D+ L           G  P  S I QL I DALA  ++  
Sbjct: 218 DLALIASWPETPLTGGAFP--SKISQLLIVDALAAEMMRQ 255


>gi|229544979|ref|ZP_04433704.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
 gi|229309871|gb|EEN75858.1| 3-hexulose-6-phosphate isomerase [Enterococcus faecalis TX1322]
          Length = 192

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 8/168 (4%)

Query: 44  SLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASH 103
           ++  E+S Q    + K       + + G G+SG +    A+ L   G     V    + H
Sbjct: 26  TIGNEISDQQVDRMTKAIQGANHIFLAGAGRSGLMIRAFANRLLHLGYSVSLVGEISSPH 85

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
              G     DL ++ S SG +  L      A+   + +   T+ + S +   AD V+ +P
Sbjct: 86  TKSG-----DLFLIGSGSGETTSLVNQAKIAKDNGVVIGLFTTNSSSTLGEIADQVVIIP 140

Query: 164 -KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSENDFYVLH 208
            +  +S    L P  S   Q ++   D++ + L+E    +       H
Sbjct: 141 TQSKQSKDEALQPMGSLFEQTSLFLYDSIILNLMEKTGETNQTMKTRH 188


>gi|210162090|gb|ACJ09643.1| putative CBS domain-containing protein [Cupressus sempervirens]
          Length = 138

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 26/108 (24%), Positives = 50/108 (46%), Gaps = 7/108 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK-- 291
              + DA+  +++   G + VV   E + + GIIT   +     +   + +V D+M +  
Sbjct: 30  DRSVYDAVKSMTQHDVGALVVVTQLEQKSIAGIITADYLRIIVQRSSKSTTVGDIMTEEN 89

Query: 292 NPKVILEDT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  DT  +  AMQL+  + I  + VV+D    IG++   D++  
Sbjct: 90  RLITVTADTNQVLNAMQLMTDNRIRHIPVVNDGM--IGMLSIGDVVSA 135


>gi|330816657|ref|YP_004360362.1| Putative transcriptional regulator, XRE family protein
           [Burkholderia gladioli BSR3]
 gi|327369050|gb|AEA60406.1| Putative transcriptional regulator, XRE family protein
           [Burkholderia gladioli BSR3]
          Length = 156

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 57/118 (48%), Gaps = 6/118 (5%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G+++  V    PL +A+  ++E+  G + VV E   L GI+T  +I     ++   
Sbjct: 7   LKVKGNTLYTVTPDMPLREAVDTMAERDIGSL-VVMEYGDLVGILTFREIILRLKENGGA 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  + V  VM  +P     +T +    +++ + +   + V++  +  +G++ F D+ +
Sbjct: 66  IGDVQVRKVM-DDPLTCTPETDVNEVRRMMLERHARYMPVLEK-RVLMGVISFYDVAK 121


>gi|302038942|ref|YP_003799264.1| hypothetical protein NIDE3661 [Candidatus Nitrospira defluvii]
 gi|300607006|emb|CBK43339.1| protein of unknown function, contains CBS domain pair [Candidatus
           Nitrospira defluvii]
          Length = 256

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 51/138 (36%), Gaps = 6/138 (4%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                     +      H    I  +     L DA   +   + G + + D+     G I
Sbjct: 121 KQSQASRQTLIGPQVAEHMSSEIRSLSQDASLKDAGQAMEHWKLGSLLLTDKQ-AYVGFI 179

Query: 268 TEGDIFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T+ D+ R    K +N    V+  M +    I  D  +  A+++++      L V      
Sbjct: 180 TDSDLARAVVAKGVNPATPVKTCMRRPVVSIAGDRPIIEAVRMMKDQATRHLAVT-QDGS 238

Query: 326 AIGIVHFLDLLRF--GII 341
            IG+V   ++LR+  G++
Sbjct: 239 IIGVVSVSNILRYYSGVV 256


>gi|118602320|ref|YP_903535.1| signal-transduction protein [Candidatus Ruthia magnifica str. Cm
           (Calyptogena magnifica)]
 gi|118567259|gb|ABL02064.1| putative signal-transduction protein with CBS domains [Candidatus
           Ruthia magnifica str. Cm (Calyptogena magnifica)]
          Length = 146

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 28/134 (20%), Positives = 45/134 (33%), Gaps = 22/134 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
              ++  V       D   I+         VVD+   L GII+E DI ++          
Sbjct: 7   MSTNVKTVTPDQLAKDIAIIMVMDHISGAPVVDDDNNLVGIISEKDILQHMFPKLDEVMS 66

Query: 277 ------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                       +K+   + V ++M K+   I        A   +   NI  + V     
Sbjct: 67  DTYFDFENMEHNYKNTMNVKVGELMTKDVASIDLSMPCLKAASTMWLRNIRRIPVT-HNN 125

Query: 325 KAIGIVHFLDLLRF 338
           K +GIV   D+ R 
Sbjct: 126 KLVGIVSIGDVHRA 139



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+D+M  N K +  D L      ++   +IS   VVDD    +GI+   D+L+
Sbjct: 1   MQVQDIMSTNVKTVTPDQLAKDIAIIMVMDHISGAPVVDDDNNLVGIISEKDILQ 55


>gi|219852982|ref|YP_002467414.1| 6-phospho 3-hexuloisomerase [Methanosphaerula palustris E1-9c]
 gi|219547241|gb|ACL17691.1| 6-phospho 3-hexuloisomerase [Methanosphaerula palustris E1-9c]
          Length = 199

 Score = 66.5 bits (161), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 33/138 (23%), Positives = 55/138 (39%), Gaps = 9/138 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++S+  ++  E   QF   ++ +     R+ + G G+SG +    A  L   G  SF V 
Sbjct: 17  VASIADTISDEEIDQF---IDMLLKAD-RIYVMGAGRSGLVAKAFAMRLMHLGLSSFVVG 72

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       T  D ++VLS SG +  +  I   AR     +  ITS   S +   AD
Sbjct: 73  ETITP-----SFTPQDAMVVLSGSGKTKTVADIAETAREIGGNIGLITSNPDSRIGRIAD 127

Query: 158 IVLTLPKEPESCPHGLAP 175
            ++ L    +  P   + 
Sbjct: 128 CIVVLESVRDEIPDDSSE 145


>gi|123967052|ref|YP_001012133.1| Mg2+ transporter [Prochlorococcus marinus str. MIT 9515]
 gi|123201418|gb|ABM73026.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus str. MIT 9515]
          Length = 469

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ LV+      + I  L         V D+ + L GI++ 
Sbjct: 150 GRLMTTEFIDLKEMQTAEEALSLVRKRAAFTETIYSLY--------VTDKERHLTGILSL 201

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         +  + DVM K+   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 202 RDLVTA----EPSRPIGDVMTKDVVNISTNTNQEEVARAIQRYDFLALPVVDKEKRLVGI 257

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 258 VTVDDLI 264



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ L+R+       I  L V D  +   GI+   DL+  
Sbjct: 148 TAGRLMTTEFIDLKEMQTAEEALSLVRKRAAFTETIYSLYVTDKERHLTGILSLRDLVTA 207


>gi|161524964|ref|YP_001579976.1| XRE family transcriptional regulator [Burkholderia multivorans ATCC
           17616]
 gi|189350289|ref|YP_001945917.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|221197721|ref|ZP_03570767.1| CBS domain protein [Burkholderia multivorans CGD2M]
 gi|221204721|ref|ZP_03577738.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221214916|ref|ZP_03587884.1| CBS domain protein [Burkholderia multivorans CGD1]
 gi|160342393|gb|ABX15479.1| putative transcriptional regulator, XRE family [Burkholderia
           multivorans ATCC 17616]
 gi|189334311|dbj|BAG43381.1| putative signal-transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|221165143|gb|EED97621.1| CBS domain protein [Burkholderia multivorans CGD1]
 gi|221175578|gb|EEE08008.1| CBS domain protein [Burkholderia multivorans CGD2]
 gi|221181653|gb|EEE14054.1| CBS domain protein [Burkholderia multivorans CGD2M]
          Length = 151

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L GI+T  +I     ++   +  + V  VM
Sbjct: 17  VTPDKPLREAVDTMAEHDIGSL-VVMEYGDLVGILTFREIILRLRENGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 41.4 bits (96), Expect = 0.22,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D  L  A+  + +H+I  L+V+ +    +GI+ F +++
Sbjct: 16  TVTPDKPLREAVDTMAEHDIGSLVVM-EYGDLVGILTFREII 56


>gi|32473238|ref|NP_866232.1| inosine monophosphate dehydrogenase-like protein [Rhodopirellula
           baltica SH 1]
 gi|32397917|emb|CAD73918.1| conserved hypothetical protein-putative inosine monophosphate
           dehydrogenase-related protein [Rhodopirellula baltica SH
           1]
 gi|327540439|gb|EGF27024.1| protein containing Cystathionine beta-synthase, core domain
           [Rhodopirellula baltica WH47]
          Length = 193

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 55/150 (36%), Gaps = 10/150 (6%)

Query: 199 FSENDFYVLHPGGKLGT------LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           FS+ D  +    G               +       ++  +      ++A+ +L  +R  
Sbjct: 14  FSDEDLVMTKTIGTATLPTPSPGTMPHVTAREMMVRNLITLSPTMDALEALDVLLRQRIS 73

Query: 253 CVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQL 308
              VVD      G+ +E    +      +++L ++ V D+  KNP  I E+T L    Q 
Sbjct: 74  GAPVVDGDGHFVGVFSEKSCMKFVVGMAYENLPSIPVGDLTDKNPPTISEETDLLTIAQT 133

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                   L V+D   +  G +   D++R 
Sbjct: 134 FLDAACRRLPVLDSEGRLRGQISRRDVMRA 163


>gi|298489788|ref|YP_003719965.1| multi-sensor hybrid histidine kinase ['Nostoc azollae' 0708]
 gi|298231706|gb|ADI62842.1| multi-sensor hybrid histidine kinase ['Nostoc azollae' 0708]
          Length = 1418

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/132 (17%), Positives = 55/132 (41%), Gaps = 29/132 (21%)

Query: 233 VKIGCPLIDAITILSE---------------------KRFGCVAVVDEGQKLKGIITEGD 271
           +     +I+AI ++++                     K+     ++ +  +L GI T  D
Sbjct: 24  ISPDSHVIEAINLMNQEENHSCNLYNVARSLLRSKQQKKVNSYILIVQQGQLLGIFTLAD 83

Query: 272 IFR--NFHKDLNTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAI 327
           + +    + DL   ++ +VM +    +    L  ++  +  L+Q+++  L +VDD    +
Sbjct: 84  VLKLIALNMDLAKTTMVEVMTQPVITLKLSDLDHISTVLYFLQQYSVQDLPIVDDEGNLV 143

Query: 328 GIVH----FLDL 335
           GI++      +L
Sbjct: 144 GIINESSLLHEL 155


>gi|192362396|ref|YP_001980871.1| RpiR family transcriptional regulator [Cellvibrio japonicus
           Ueda107]
 gi|190688561|gb|ACE86239.1| transcriptional regulator, RpiR family [Cellvibrio japonicus
           Ueda107]
          Length = 294

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 68/161 (42%), Gaps = 7/161 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGI--GKSGHIGSKLASTLASTGTPSFFV 96
           S+L ++L   +   F      + +   R++  G   G S  +  ++   +A  G P    
Sbjct: 110 STLRANLARFVEADFRAGANALNSA--RLIYVGGMGGGSTMLADEVQYRIARLGLPVTAY 167

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
           H           +T  D++++LS +G + EL  +   AR +   +IA+T+  +S +A  A
Sbjct: 168 HDPVLLRMLAATLTEKDVLVLLSVTGVTPELLEVADIAREYGAQIIAMTA-PQSPLAEKA 226

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           +++L  P   E       P+ S    L   D LA  L   R
Sbjct: 227 NVLL--PVMTEETDFIFKPSASRYGVLLAVDILATELALLR 265


>gi|113867994|ref|YP_726483.1| putative signal-transduction protein [Ralstonia eutropha H16]
 gi|113526770|emb|CAJ93115.1| putative signal-transduction protein [Ralstonia eutropha H16]
          Length = 154

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 7/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDI---FRNFHKD 279
                  V + C L +A   + ++  G + V +    G +  G++T+ DI         D
Sbjct: 7   CSAKAVHVPLSCTLQEAAVQMRDRHVGALIVTENSPAGTRAVGMVTDRDIVIGATATGAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                V +VM +    I  D ++  AMQL+  H +  L V+D  +   G+V   DL   
Sbjct: 67  PCRTDVVEVMTRGLVAIQRDAVVAEAMQLMLTHGVRRLAVLD-GEAVTGVVALDDLFAA 124


>gi|71908619|ref|YP_286206.1| PAS [Dechloromonas aromatica RCB]
 gi|71848240|gb|AAZ47736.1| PAS protein [Dechloromonas aromatica RCB]
          Length = 1560

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 3/108 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-KDLNTLSVEDVMIKN 292
                L DA  +++ +    + V+ +G+ L GI+TE +I R  H +      ++ +M + 
Sbjct: 21  PPQATLEDAAKLMAAEHISSLLVIADGEAL-GIVTESNILRALHARQPRETRLDVIMSQP 79

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
                 D  L  A +L+ + NI  L+V +      GIV   D  +R G
Sbjct: 80  LITAPSDLNLISARRLVEERNIRHLVVKNPNGTVAGIVSDTDFRIRLG 127



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTL 283
               IP +     L  AI  +       + V ++   L GI+TE DI R   K L  + +
Sbjct: 141 MDRQIPKLPPDALLDQAIACMVNNAADYLIVSNDDTPL-GILTERDIPRLLDKFLTPHDV 199

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            + + M    + +  +  +T A++ + + ++  ++V+D+  K +G+V 
Sbjct: 200 RLGETMSSPLRSVNVEMSVTGALEAMNRFHLRHMVVLDNNGKILGVVS 247



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ D+M  + + +     L  A +L+   +IS L+V+    +A+GIV   ++LR 
Sbjct: 8   TLGDIMTSDVRSLPPQATLEDAAKLMAAEHISSLLVI-ADGEALGIVTESNILRA 61



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 44/107 (41%), Gaps = 3/107 (2%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
                LI A  ++ E+    + V +    + GI+++ D           +  ++E +M +
Sbjct: 84  PSDLNLISARRLVEERNIRHLVVKNPNGTVAGIVSDTDFRIRLGTAAFQHLRTLEGIMDR 143

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               +  D LL  A+  +  +    L+V +D    +GI+   D+ R 
Sbjct: 144 QIPKLPPDALLDQAIACMVNNAADYLIVSNDD-TPLGILTERDIPRL 189



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 7/45 (15%), Positives = 20/45 (44%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           V +   +  A+  ++      + V+D   K+ G++++  +F    
Sbjct: 212 VNVEMSVTGALEAMNRFHLRHMVVLDNNGKILGVVSQRRLFEQLA 256


>gi|307823404|ref|ZP_07653633.1| 6-phospho 3-hexuloisomerase [Methylobacter tundripaludum SV96]
 gi|307735389|gb|EFO06237.1| 6-phospho 3-hexuloisomerase [Methylobacter tundripaludum SV96]
          Length = 177

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/173 (18%), Positives = 64/173 (36%), Gaps = 8/173 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  +   L+           + +   K R+ I G G+S  +G+  A  L   G     V 
Sbjct: 7   IEKISGVLEATDDTYDVKLTQLLDNAK-RIFIAGAGRSKLVGNFFAMRLVHGGYDVSVVG 65

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL+I++S SG +++L A    A++    ++ I++++ S +   AD
Sbjct: 66  EIVTP-----SIKNGDLLIIISGSGETEQLIAFTKSAKKIGANIVLISAKSSSTIGDLAD 120

Query: 158 IVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
            V  +    +       P  +      L   +A    ++  +  +E      H
Sbjct: 121 AVFQIGNPEQYGKVLGMPMGTVFELSTLLFLEATISHIIHDKGIAEEVMRERH 173


>gi|302923997|ref|XP_003053792.1| predicted protein [Nectria haematococca mpVI 77-13-4]
 gi|256734733|gb|EEU48079.1| predicted protein [Nectria haematococca mpVI 77-13-4]
          Length = 532

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/189 (17%), Positives = 63/189 (33%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + + L  P           P  S+ M       +AI +            V+H       
Sbjct: 55  SAVTLDAPITKRITL--KTPFVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSPEA 107

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V ++G+   KL GI+T
Sbjct: 108 QADMVRKVKRYENGFILDPIVIARNTTVGEAKALKEKWGFGGFPVTEDGKLGSKLLGIVT 167

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI     +D +   +  VM+ +     +   L  A ++L +     L +VD     + 
Sbjct: 168 NRDIQF---EDDHDHDISSVMVTDLITAPDGVTLAEANKILAKSKKGKLPIVDKDFNLVS 224

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 225 MISRSDLTK 233


>gi|303275211|ref|XP_003056904.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226461256|gb|EEH58549.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 217

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 20/77 (25%), Positives = 39/77 (50%)

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           E  +  G+++  D+ +  + +   ++VED+M   P  +     +     ++  H +  L 
Sbjct: 120 ESGECVGVLSRRDVEKLKNGEKVGITVEDIMSHPPFCVRPHAHIAETAGMMLMHRVHRLP 179

Query: 319 VVDDCQKAIGIVHFLDL 335
           VVDD +K+IGIV   D+
Sbjct: 180 VVDDKKKSIGIVTRTDI 196



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 15/76 (19%), Positives = 28/76 (36%), Gaps = 2/76 (2%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
                   + +   D+M        V+    + +   ++   R   + VVD+ +K  GI+
Sbjct: 134 EKLKNGEKVGITVEDIMSHPPFC--VRPHAHIAETAGMMLMHRVHRLPVVDDKKKSIGIV 191

Query: 268 TEGDIFRNFHKDLNTL 283
           T  DIF       + L
Sbjct: 192 TRTDIFEPLIAKRDDL 207


>gi|196040830|ref|ZP_03108128.1| acetoin utilization protein AcuB [Bacillus cereus NVH0597-99]
 gi|196028284|gb|EDX66893.1| acetoin utilization protein AcuB [Bacillus cereus NVH0597-99]
          Length = 214

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KTGKLVGIISESTVLHTLVKL 130



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQNNHVVGIISDRD 52


>gi|84500795|ref|ZP_00999030.1| hypothetical protein OB2597_01632 [Oceanicola batsensis HTCC2597]
 gi|84390862|gb|EAQ03280.1| hypothetical protein OB2597_01632 [Oceanicola batsensis HTCC2597]
          Length = 129

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
                  +     L +A  ++     G V V  E  +L G IT+ DI  N      +   
Sbjct: 1   MNQHAVTLTPQQTLGEAAEVMRRIDTGFVPV-GENDRLVGTITDRDIVVNGMARGKSADD 59

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +V +VM +      +D  +    + + +  +  + VVD  ++ +GIV   DL
Sbjct: 60  AVREVMGQEVLYCFDDQEVAEVARNMGERQVRRMPVVDRDKRLVGIVSLGDL 111


>gi|332162328|ref|YP_004298905.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|325666558|gb|ADZ43202.1| LacI family regulatory protein [Yersinia enterocolitica subsp.
           palearctica 105.5R(r)]
 gi|330859114|emb|CBX69468.1| hypothetical protein YEW_JC39820 [Yersinia enterocolitica W22703]
          Length = 246

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RIIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I          +I++T+ + S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIILSVSGETEEIIRIANQFSLQHCKIISLTNSDNSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|150016401|ref|YP_001308655.1| hypothetical protein [Clostridium beijerinckii NCIMB 8052]
 gi|149902866|gb|ABR33699.1| CBS domain containing protein [Clostridium beijerinckii NCIMB 8052]
          Length = 154

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 55/132 (41%), Gaps = 26/132 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------- 283
           V     + D + +L   + G V +VD    L GI+++GDI R+ +     +         
Sbjct: 14  VSKENTIKDVMRVLVTNKIGGVPIVDNKGILSGIVSDGDIIRSINPKEGKMYDLISYVFY 73

Query: 284 -----------SVED--VMI----KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
                       ++D  +M     K+   +  +  +   + +  +HN   + V+D  ++ 
Sbjct: 74  LKKEELEEEIGIIKDTNIMTIAKCKDIFCVFPEDTMEKVLSIFSKHNFKKIPVIDKERRV 133

Query: 327 IGIVHFLDLLRF 338
           +G++   D++R+
Sbjct: 134 VGVISRGDVIRY 145



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+D MI +   + ++  +   M++L  + I  + +VD+     GIV   D++R
Sbjct: 1   MKVKDFMITDVISVSKENTIKDVMRVLVTNKIGGVPIVDNKGILSGIVSDGDIIR 55



 Score = 39.5 bits (91), Expect = 0.73,   Method: Composition-based stats.
 Identities = 14/68 (20%), Positives = 31/68 (45%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +G +       +     I  V     +   ++I S+  F  + V+D+ +++ G+I+ GD+
Sbjct: 83  IGIIKDTNIMTIAKCKDIFCVFPEDTMEKVLSIFSKHNFKKIPVIDKERRVVGVISRGDV 142

Query: 273 FRNFHKDL 280
            R   K +
Sbjct: 143 IRYIQKKI 150


>gi|282866636|ref|ZP_06275678.1| putative signal transduction protein with CBS domains [Streptomyces
           sp. ACTE]
 gi|282558538|gb|EFB64098.1| putative signal transduction protein with CBS domains [Streptomyces
           sp. ACTE]
          Length = 132

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V D      GI+TE DI       +D +  +      
Sbjct: 14  IGPAHTLRQAARLMSARRIGAAVVHDPDTCGLGILTERDILVAVGCGQDPDIETAGAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V+DD    +GIV   D++R
Sbjct: 74  TDVVFASPVWTLDEAAGAMTHGGFRHLIVLDDDG-PVGIVSVRDIIR 119



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A +L+    I   +V D     +GI+   D+L
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAARLMSARRIGAAVVHDPDTCGLGILTERDIL 54


>gi|256383864|gb|ACU78434.1| transcription regulator GntR [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|256384695|gb|ACU79264.1| transcription regulator GntR [Mycoplasma mycoides subsp. capri str.
           GM12]
 gi|296455765|gb|ADH22000.1| transcription regulator GntR [synthetic Mycoplasma mycoides
           JCVI-syn1.0]
          Length = 277

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/182 (14%), Positives = 67/182 (36%), Gaps = 7/182 (3%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            +  +SL  NS +  A  +II+       L    Q  +          +     ++ +  
Sbjct: 83  DQITYSLTSNSLILNAYNNIISSLNETFKLTIEQQDTIKNLISKIKNAL-----KIAVFA 137

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G + ++       L   G     V+    ++     + ++DL I +S+SG + +L  + 
Sbjct: 138 VGGTFNVAKDFEQKLLRIGFNITAVNDFHNAYLLACQLNKNDLAIFISYSGETLDLIKLA 197

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               + ++ +  +     + ++  ++ ++ +    +        +TS    L   D + I
Sbjct: 198 QVCTKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRL--VSSTSRFSLLFALDLIYI 255

Query: 192 AL 193
            L
Sbjct: 256 FL 257


>gi|224541991|ref|ZP_03682530.1| hypothetical protein CATMIT_01164 [Catenibacterium mitsuokai DSM
           15897]
 gi|224525048|gb|EEF94153.1| hypothetical protein CATMIT_01164 [Catenibacterium mitsuokai DSM
           15897]
          Length = 242

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 7/140 (5%)

Query: 35  KRGLSSLESSLQG----ELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
           KR L+ +          E     H   E I      V+ +GIG S  I    AS     G
Sbjct: 78  KRALNYILDYFNRVDNKEFDDLIHQTAEIIVNSH-EVICSGIGLSDAIAKFAASLFNRKG 136

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             + +  + + S    GM  ++D  +  + SG + E+   +   +++ I +I IT+   S
Sbjct: 137 KRTMY--SGDFSSRFRGMYDQNDCALFFTVSGETREIIDRIKDLKKYDIKIIVITNSASS 194

Query: 151 VVACHADIVLTLPKEPESCP 170
             A  +D+ LT         
Sbjct: 195 TAAKMSDLALTYYMPSTKNS 214


>gi|121608225|ref|YP_996032.1| inosine-5'-monophosphate dehydrogenase [Verminephrobacter eiseniae
           EF01-2]
 gi|121552865|gb|ABM57014.1| inosine-5'-monophosphate dehydrogenase [Verminephrobacter eiseniae
           EF01-2]
          Length = 491

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 62/169 (36%), Gaps = 9/169 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +               +
Sbjct: 40  NLPLVSAAMDTVTEARLAIAIAQEGGVGIVH-KNLTPQAQAAQVAKVKRYESGVLRDPVV 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  ++  + +  +       V D G K+ GI+T  D+      D+    V  +M   
Sbjct: 99  ITPGHTVLQVLQLSEQLGISGFPVCD-GGKVVGIVTGRDLRFETRYDV---KVHQIMTPR 154

Query: 293 PKVIL----EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            K+I     + T    A  LL +H +  ++V++D  +  G++   D+ +
Sbjct: 155 EKLITVNEKDGTTPAEAKALLNKHKLERILVINDAFELKGLITVKDITK 203


>gi|42560799|ref|NP_975250.1| transcription regulator gntR [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
 gi|42492295|emb|CAE76892.1| Transcription regulator gntR [Mycoplasma mycoides subsp. mycoides
           SC str. PG1]
          Length = 278

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/192 (16%), Positives = 73/192 (38%), Gaps = 9/192 (4%)

Query: 12  TRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITG 71
            +  +SL  NS +  A  +II+     S L    Q  +        + +     ++ +  
Sbjct: 84  DQITYSLTSNSLILNAYNNIISSLDETSKLTIEQQDTIKNLISKIKKAL-----KIAVFA 138

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAIL 131
           +G + +I       L   G     V+     +     +  +DL I +S+SG + +L  + 
Sbjct: 139 VGGTFNIAKDFQQKLLRIGFNITAVNDFHNGYLLANQLNNNDLAIFVSYSGETLDLIKLA 198

Query: 132 YYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
               + ++ +  +     + ++  ++ ++ +    +        TTS    L   D + I
Sbjct: 199 QVCIKNNVQIAVVCKATNNTLSNLSNYLINISSNEKIDRL--VSTTSRFSLLFALDLIYI 256

Query: 192 AL--LESRNFSE 201
            L   + +N++E
Sbjct: 257 FLLSTDLKNYTE 268


>gi|169826357|ref|YP_001696515.1| putative HTH-type transcriptional regulator [Lysinibacillus
           sphaericus C3-41]
 gi|168990845|gb|ACA38385.1| Putative HTH-type transcriptional regulator [Lysinibacillus
           sphaericus C3-41]
          Length = 291

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/185 (18%), Positives = 67/185 (36%), Gaps = 4/185 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
             +        +  N  +Q  +  +  +   + +  ++L  E   +   AV  +   + R
Sbjct: 77  DLQRKNTVDRDIEANEPLQSIVEKVTLQSSDILTQTANLIDE--AELERAVSALAKAR-R 133

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           ++  G+G SG                S            +      D+++ +S+SG + E
Sbjct: 134 IIFFGVGASGITAMDADQKFLRINRHSKAFMDLHLGATSVVNAQEGDVVVGISFSGETHE 193

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  IL  A       I++T    S+V+  ADI L +             T+S + QL + 
Sbjct: 194 VAKILEIAGETPATTISLTRYGNSLVSSLADICLYVS-PNVEATFRSGATSSRLAQLLVI 252

Query: 187 DALAI 191
           D L +
Sbjct: 253 DILFM 257


>gi|42560719|ref|NP_975170.1| Mg2+ transporter [Mycoplasma mycoides subsp. mycoides SC str. PG1]
 gi|42492215|emb|CAE76812.1| MG2+ TRANSPORT PROTEIN [Mycoplasma mycoides subsp. mycoides SC str.
           PG1]
 gi|301321144|gb|ADK69787.1| magnesium transporter [Mycoplasma mycoides subsp. mycoides SC str.
           Gladysdale]
          Length = 467

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/109 (26%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 233 VKIGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           VK    +   I  + +          V VV++  +L G I   D+      D+NT  +ED
Sbjct: 144 VKQTTTVSKTIKEIQKNHDDYDEIDNVFVVNKLNQLVGSIEVKDL---ILNDMNT-KIED 199

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M      I  +     A   L++++IS L VVDD    +GI+   D++
Sbjct: 200 IMNTKVISINSNQSQEDASNALKKYDISTLAVVDDNNVLVGIITSDDII 248


>gi|328554326|gb|AEB24818.1| hypothetical protein BAMTA208_13285 [Bacillus amyloliquefaciens
           TA208]
          Length = 241

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 38/195 (19%), Positives = 77/195 (39%), Gaps = 13/195 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS FK   +      K +T++ +  S+          E ++ G++  +   A   +   +
Sbjct: 59  FSEFKVKLKMYAEADKKTTLKSSHHSVT------EFFERTVSGDMEEKLKEAAALVADAE 112

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGS 123
             V+  G+G SG +    A   +  G  S ++       H        + + I LS SG 
Sbjct: 113 N-VIFIGVGSSGILAEYGARYFSCLGKLSMYIKDPYFPVHSHF---RHNSITIALSVSGE 168

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
                  L   ++    +I+IT+   S +A  +D+ L+     E   +     T+ I  +
Sbjct: 169 GHSTVTHLNQLKQEGSRVISITNHKHSTIAKMSDVNLSYYVTEEWVENANI--TTQIPVM 226

Query: 184 AIGDALAIALLESRN 198
            I +++A  + + R+
Sbjct: 227 YILESMAREIYKLRD 241


>gi|254467756|ref|ZP_05081163.1| CBS domain protein [Rhodobacterales bacterium Y4I]
 gi|206684193|gb|EDZ44679.1| CBS domain protein [Rhodobacterales bacterium Y4I]
          Length = 138

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 43/113 (38%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNT 282
                   + G  +  A   +     G + VV E  ++ G++T+ D+          LN 
Sbjct: 7   MSVPARFARRGDSVASAAEQMRSLGIGVLPVV-ENDEIVGVVTDRDLALVLAGRDSALNG 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L++  VM            +  A  L+  H +  L V+DD  +  G++   D+
Sbjct: 66  LTIAAVMNDGVICCRAADSIEAAAALMGDHQVRRLPVLDDSGRLAGLLSVTDI 118



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           VE++M    +       +  A + +R   I VL VV++ +  +G+V   DL
Sbjct: 3   VEEIMSVPARFARRGDSVASAAEQMRSLGIGVLPVVENDE-IVGVVTDRDL 52


>gi|149174386|ref|ZP_01853013.1| nucleoside-diphosphate-sugar pyrophosphorylase [Planctomyces maris
           DSM 8797]
 gi|148846931|gb|EDL61267.1| nucleoside-diphosphate-sugar pyrophosphorylase [Planctomyces maris
           DSM 8797]
          Length = 377

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 1/106 (0%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTL 283
               +  L+     + D I  +   + G   VVD    L+G++T+GD+ R          
Sbjct: 1   MDSINECLINETADIRDTIRAIESGKKGIAVVVDHCGTLQGVVTDGDVRRGLLAGQKLKD 60

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           SV  +M + P      +     ++LL Q  +  L +V++    + I
Sbjct: 61  SVTAIMNRRPTKADVCSSQASIIELLEQSGLEALPLVNEQNCVVDI 106


>gi|114563062|ref|YP_750575.1| DNA-binding transcriptional regulator HexR [Shewanella
           frigidimarina NCIMB 400]
 gi|114334355|gb|ABI71737.1| transcriptional regulator, RpiR family [Shewanella frigidimarina
           NCIMB 400]
          Length = 284

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDTSAINKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINCNEGDVVVLISHTGRTKSLIEIARIARENGAAVIGITAR-NSPLSYEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL   D LA      R     D
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRGPRFRD 264


>gi|322381598|ref|ZP_08055571.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
 gi|321154434|gb|EFX46737.1| transcriptional regulator-like protein [Paenibacillus larvae subsp.
           larvae B-3650]
          Length = 287

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/168 (19%), Positives = 66/168 (39%), Gaps = 4/168 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           +   A+E +   + ++ + GIG S  I       L          +  ++       +  
Sbjct: 123 ELDRAIEVLGGAR-KITLFGIGASAVIAQDFKQKLTRINRWCEAAYDFDSQATLAANLQE 181

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D ++ +S+SG++ ++   +  A+     LI++T    + VA  A I L      +S   
Sbjct: 182 KDAVLGISYSGNTQDILLAMQAAKERGATLISLTKFGHNPVAEQAHIRLFTSSLEKSIRS 241

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           G     S I QL + D L + +   +N+ EN   + +    +  +   
Sbjct: 242 GA--MASRIAQLNVIDILYVGIA-RQNYEENILALENTRKAVKMMNRH 286


>gi|331661312|ref|ZP_08362239.1| 3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase)
           (PHI) [Escherichia coli TA206]
 gi|331051571|gb|EGI23615.1| 3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase)
           (PHI) [Escherichia coli TA206]
          Length = 155

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 59/150 (39%), Gaps = 6/150 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  LE++       Q    + +I+  +  + + G G+SG      A+ L   G     V 
Sbjct: 11  LHELENNALKIDDSQAAQFISQIRNAR-HIFLQGAGRSGIAIRAFANRLLHLGFSVSVVG 69

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
              + H         DL+I+ S SG +  LK++   A    + +  +T +  S +   A 
Sbjct: 70  EISSPHT-----QPGDLLIIGSGSGETTSLKSLAQKAVDSGVNVALVTMKANSTIGKLAQ 124

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
            VL LP   +   + +A T +  M  A   
Sbjct: 125 SVLVLPGSVKDDNNRVAGTFAQPMGSAFEQ 154


>gi|87124369|ref|ZP_01080218.1| IMP dehydrogenase-like protein [Synechococcus sp. RS9917]
 gi|86167941|gb|EAQ69199.1| IMP dehydrogenase-like protein [Synechococcus sp. RS9917]
          Length = 174

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/134 (25%), Positives = 54/134 (40%), Gaps = 29/134 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    PL +A+ ++S+     + VVD    L G ITE D+                    
Sbjct: 35  VTPETPLQEAVAMMSDHHISGLPVVDASGVLVGEITEQDLMVRESGVDVGPYVMLLDSVI 94

Query: 274 ---------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                    R  H+ +   +V D+M ++         L  A  LL + +   L+VVDD Q
Sbjct: 95  YLRNPLHWDRQVHQ-VLGTAVNDLMRRDSHTCAAALPLPRAASLLHERSTQRLIVVDDQQ 153

Query: 325 KAIGIVHFLDLLRF 338
           K IG++   D++R 
Sbjct: 154 KPIGVITRGDVVRA 167



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/62 (27%), Positives = 28/62 (45%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                +   SV +VM      +  +T L  A+ ++  H+IS L VVD     +G +   D
Sbjct: 14  RMCSMVLQQSVREVMTTPVLTVTPETPLQEAVAMMSDHHISGLPVVDASGVLVGEITEQD 73

Query: 335 LL 336
           L+
Sbjct: 74  LM 75


>gi|330721089|gb|EGG99226.1| putative signal transduction protein [gamma proteobacterium
           IMCC2047]
          Length = 107

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 46/104 (44%), Gaps = 14/104 (13%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLNTLSVEDVMIKNP 293
           +++ +   + +V E  KL GI++  D+                +  +  L ++D+M  N 
Sbjct: 1   MADNKVRRLPIV-ENGKLVGIVSLNDVLEAKPSAASSLSVWELNYLVANLKIKDIMCANV 59

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             I  D  +  A +++ +   S + V ++  K IGI+   D+ R
Sbjct: 60  FSISPDATVGEAAKMMLEKKFSGIPVTEND-KLIGIITESDIFR 102



 Score = 44.1 bits (103), Expect = 0.028,   Method: Composition-based stats.
 Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 1/45 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +     + +A  ++ EK+F  + V  E  KL GIITE DIFR   
Sbjct: 62  ISPDATVGEAAKMMLEKKFSGIPVT-ENDKLIGIITESDIFRMLA 105



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  + +  L +V +  K +GIV   D+L   
Sbjct: 1   MADNKVRRLPIV-ENGKLVGIVSLNDVLEAK 30


>gi|295706898|ref|YP_003599973.1| acetoin utilization protein AcuB [Bacillus megaterium DSM 319]
 gi|294804557|gb|ADF41623.1| acetoin utilization protein AcuB [Bacillus megaterium DSM 319]
          Length = 213

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 17/110 (15%), Positives = 42/110 (38%), Gaps = 9/110 (8%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSVE 286
               + +A+ +L   +   + +V++   + GII++ D+           +   L +  + 
Sbjct: 16  PDHTIAEAMKLLDTHKIRHIPIVNDLHHVVGIISDRDVRDASPSILDNTYTSALLSEPLR 75

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +M            +     +  +H I  + V    ++ +G+V   DLL
Sbjct: 76  MIMQTEVITAHPLDFVEEIASIFYEHQIGCIPVT-KNKRLVGVVTERDLL 124



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 26/50 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M  +   +  D  +  AM+LL  H I  + +V+D    +GI+   D
Sbjct: 3   VEEMMKTDLVTLTPDHTIAEAMKLLDTHKIRHIPIVNDLHHVVGIISDRD 52


>gi|194289349|ref|YP_002005256.1| hypothetical protein RALTA_A1226 [Cupriavidus taiwanensis LMG
           19424]
 gi|193223184|emb|CAQ69189.1| conserved hypothetical protein, CBS (cystathionine-beta-synthase)
           domains [Cupriavidus taiwanensis LMG 19424]
          Length = 148

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 56/119 (47%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G+++  V     L+ A+  ++E   G + VV E   L G++T  +I     ++   
Sbjct: 7   LQIKGNTLYTVTPDTSLLVAVHTMAEHDIGSL-VVMEYGDLVGMLTFREIIETLARNNGN 65

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + T S+  VM   P     +T +    +++ + +   L V+D+ +  +G++ F D+ + 
Sbjct: 66  VGTSSIRKVMDDAPLTCTMETDVNEVRRMMLERHTRYLPVLDN-RTLMGVISFYDVAKA 123


>gi|89054406|ref|YP_509857.1| signal-transduction protein [Jannaschia sp. CCS1]
 gi|88863955|gb|ABD54832.1| putative signal-transduction protein with CBS domains [Jannaschia
           sp. CCS1]
          Length = 144

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 4/109 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVM 289
           +  G  + +A   LS KR G + V  +G  + GI++E DI R             VE +M
Sbjct: 18  IAPGSSVGEAAKTLSAKRIGALVVSSDGTDIAGILSERDIVRAIGSGGPGCLADPVESLM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                    D  +   +  + Q     + V+D     +G++   D+++ 
Sbjct: 78  TSKIISATRDESVEQVLGKMTQGRFRHMPVMDGA-AMVGLISIGDVVKA 125



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I   + +  A + L    I  L+V  D     GI+   D++R 
Sbjct: 16  VTIAPGSSVGEAAKTLSAKRIGALVVSSDGTDIAGILSERDIVRA 60


>gi|55379803|ref|YP_137653.1| inosine-5'-monophosphate dehydrogenase-like protein IV [Haloarcula
           marismortui ATCC 43049]
 gi|55232528|gb|AAV47947.1| inosine-5'-monophosphate dehydrogenase related protein IV
           [Haloarcula marismortui ATCC 43049]
          Length = 149

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/115 (26%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTL 283
               +  V     + D   +L+ +  G V V  E  +  GI+T+ DI        D +T 
Sbjct: 23  MTKPVKTVDRELAVRDVSKLLASEAVGSVVVETEYGR--GILTKTDIIAGLRDGMDPDTT 80

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V D+M    K I     L  A+  + +H+I  L VVD     +GI+   D+++ 
Sbjct: 81  PVGDLMTTPVKTIDPGAPLEEAIDTMVEHSIKRL-VVDGQADGVGILTTTDVMQE 134


>gi|262276023|ref|ZP_06053832.1| inosine monophosphate dehydrogenase-related protein [Grimontia
           hollisae CIP 101886]
 gi|262219831|gb|EEY71147.1| inosine monophosphate dehydrogenase-related protein [Grimontia
           hollisae CIP 101886]
          Length = 139

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 46/106 (43%), Gaps = 4/106 (3%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKN 292
            PL  A+  +         VVD+  K+ G ++E D+     K      ++ +V D M   
Sbjct: 21  MPLSSALEKMLSANQTGGPVVDDRNKVVGFLSEQDLIHKLLKVGYHCQDSDNVADCMRSE 80

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            K +L D  +    + +      V  V+D+ ++ +G++   D+LR 
Sbjct: 81  VKAVLPDDSIIGLAEEMMPTKPKVYPVIDEDERLVGVISRRDILRA 126



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 4/64 (6%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDL 335
           + ++ V+D M K P        L+ A++ +   N +   VVDD  K +G +        L
Sbjct: 1   MESIKVKDYMNKRPVTFTVSMPLSSALEKMLSANQTGGPVVDDRNKVVGFLSEQDLIHKL 60

Query: 336 LRFG 339
           L+ G
Sbjct: 61  LKVG 64



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 21/50 (42%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     +I     +   +     V+DE ++L G+I+  DI R     ++ 
Sbjct: 84  VLPDDSIIGLAEEMMPTKPKVYPVIDEDERLVGVISRRDILRAIAAQIDD 133


>gi|221200057|ref|ZP_03573100.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
 gi|221206790|ref|ZP_03579802.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2]
 gi|221173445|gb|EEE05880.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2]
 gi|221180296|gb|EEE12700.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
          Length = 313

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L  + Q   +  F  A +++   K   V    G S  +  +L   L   G P      +
Sbjct: 130 ALAHNHQLLRNASFDAAADRLVGAKMIYVYGQGGGSTALADELRFRLVRFGRPVATYQDS 189

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    ++RD +++ LS SG   EL      A+R+   LIAIT+   S +A  AD  
Sbjct: 190 LLQRMVSATLSRDAVVVALSVSGRVPELLENCRLAKRYGATLIAITA-PASPLAKLADH- 247

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +P           P+TS    +   D L   +     
Sbjct: 248 -LIPVVAFETDFIYKPSTSRYAMMMAIDVLVTGVALRLG 285


>gi|78185970|ref|YP_374013.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           luteolum DSM 273]
 gi|78165872|gb|ABB22970.1| glutamine--fructose-6-phosphate transaminase [Chlorobium luteolum
           DSM 273]
          Length = 614

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 69/154 (44%), Gaps = 10/154 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           ++++K  + R+VI   G S H   IG  L    A    P    +A+E       +I  DD
Sbjct: 293 LDRLKQAR-RIVICACGTSWHAGLIGEYLIEDFAR--IPVEVDYASE-FRYRNPIIGPDD 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     ++ I +   S +A      +     PE    G+
Sbjct: 349 VVIVISQSGETADTLAALRAAKEKGAMVMGICNVVGSTIARETMCGIYTHAGPEV---GV 405

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           A T +   Q+ +   LA+AL + R  S ++  + 
Sbjct: 406 ASTKAFTAQVIVLYMLALALSKGRTISHDEMRLS 439


>gi|95930771|ref|ZP_01313504.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
 gi|95133251|gb|EAT14917.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
          Length = 606

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
              ++   G    L+ +G  L D +  +S  +     VVD+  ++ GI +  DI R  ++
Sbjct: 469 RVGELESKGREATLIPVGMTLPDVLQAISTAKSAYFPVVDDDDRMLGIFSLNDIRRILNE 528

Query: 279 DL--NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           ++    +   D+  +       +  LT  M+ +   N+  + VV+  Q
Sbjct: 529 EIPPGLVVAGDMATRQVIYATPNEALTEVMKKITSRNLEEIPVVNSAQ 576


>gi|327394164|dbj|BAK11586.1| HTH-type transcriptional regulator HexR [Pantoea ananatis AJ13355]
          Length = 287

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 67/199 (33%), Gaps = 8/199 (4%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEK-RGLSSLESSLQGELSFQFHCAVEK 59
           +    +  KS       + ++ +V+     I      GL  +   L          AV  
Sbjct: 66  LQLAQALVKSPNWLSRDVQEDDSVERYSEKIFDSALAGLQRVREHLD---LAALQQAVSH 122

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +     ++   G+G S  +     +       P  +                 ++ +++S
Sbjct: 123 LTHTD-KITFFGLGASAVVAHDAFNKFLRFNLPVIWSDDVVMQRMSCINSRDKEVFVLIS 181

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            +G +  +  +   A+     +IAITS   S +A  A + L +    ++  +   P  S 
Sbjct: 182 HTGRTRNMVELAQMAKANGSTVIAITS-AGSPLAHEASLALLVDVPEDTDIY--LPMVSR 238

Query: 180 IMQLAIGDALAIALLESRN 198
           + QL + D LA      R 
Sbjct: 239 LAQLTVIDLLATGFTLERG 257


>gi|318606396|emb|CBY27894.1| phosphosugar-binding transcriptional regulator,RpiR family
           [Yersinia enterocolitica subsp. palearctica Y11]
          Length = 246

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 58/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDSAAAQIAATR-RIIFVGIGTSGALGKYSARFFSNVGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I          +I++T+ + S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIILSVSGETEEIIRIANQFSLQHCKIISLTNSDNSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|317133284|ref|YP_004092598.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Ethanoligenens harbinense YUAN-3]
 gi|315471263|gb|ADU27867.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Ethanoligenens harbinense YUAN-3]
          Length = 373

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 52/137 (37%), Gaps = 3/137 (2%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            NDF     G    +     S V         V      ++ +++++ K    + V DE 
Sbjct: 228 ANDFVRNFIGMHTSSANRDLSVVEVMRKKPVTVTENKHTLECVSLMNSKGIDSLIVTDED 287

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
            +LKGI+T  +I R+         ++ ++  +   +        A  LL       L+VV
Sbjct: 288 GRLKGIVTAENIRRSGKPG---QPIKGLIDNSVGTVSVTGSAKEAFDLLLGTKAEYLIVV 344

Query: 321 DDCQKAIGIVHFLDLLR 337
           D   +  G++    ++R
Sbjct: 345 DAESRVAGMITRTGMVR 361



 Score = 57.2 bits (137), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 28/59 (47%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             LSV +VM K P  + E+      + L+    I  L+V D+  +  GIV   ++ R G
Sbjct: 245 RDLSVVEVMRKKPVTVTENKHTLECVSLMNSKGIDSLIVTDEDGRLKGIVTAENIRRSG 303


>gi|172034825|ref|YP_001798602.1| hypothetical protein cce_5222 [Cyanothece sp. ATCC 51142]
 gi|171701589|gb|ACB54568.1| unknown [Cyanothece sp. ATCC 51142]
          Length = 210

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFR---NFHKDLN 281
               +  ++    +  A+ ++ +K+   + V     Q   GIIT+ DI        K+  
Sbjct: 10  MTKDVITIRSSATVSMAVKLMRDKKIHTLIVQRRHPQDAYGIITDSDIVNEVIASGKNPK 69

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V ++M K   V+  D  +  A +L + H I    V+ D    +GIV  +D+L
Sbjct: 70  QVRVYEIMTKPCLVLNPDLGVEYAAKLFKNHGIRCAPVIKDE--LLGIVSIVDIL 122



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 5/57 (8%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI---GIVHFLDLL 336
           + V D+M K+   I     +++A++L+R   I  L+V    +      GI+   D++
Sbjct: 4   MKVADIMTKDVITIRSSATVSMAVKLMRDKKIHTLIV--QRRHPQDAYGIITDSDIV 58


>gi|262394779|ref|YP_003286633.1| inosine monophosphate dehydrogenase-like protein [Vibrio sp. Ex25]
 gi|262338373|gb|ACY52168.1| inosine monophosphate dehydrogenase-related protein [Vibrio sp.
           Ex25]
          Length = 139

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 20  DMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLLDKLVKASYHCQDTHTVQECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  D  +     +++     +  VVD   K +G++   D+LR 
Sbjct: 79  DDVLSVSPDMSVIELADMMKIGKPKMYPVVDGKGKLVGVITRRDVLRA 126



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD   KL G+IT  D+ R  
Sbjct: 70  THTVQECMHDDVLS--VSPDMSVIELADMMKIGKPKMYPVVDGKGKLVGVITRRDVLRAI 127

Query: 277 HKDLNT 282
              LN 
Sbjct: 128 GMTLNE 133



 Score = 44.1 bits (103), Expect = 0.033,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M        +D  L+ A+ ++++   +    V+D+ +K +G +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTKDMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLL 57


>gi|221211239|ref|ZP_03584218.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD1]
 gi|221168600|gb|EEE01068.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD1]
          Length = 313

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L  + Q   +  F  A +++   K   V    G S  +  +L   L   G P      +
Sbjct: 130 ALAHNHQLLRNASFDAAADRLVGAKMIYVYGQGGGSTALADELRFRLVRFGRPVATYQDS 189

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    ++RD +++ LS SG   EL      A+R+   LIAIT+   S +A  AD  
Sbjct: 190 LLQRMVSATLSRDAVVVALSVSGRVPELLENCRLAKRYGATLIAITA-PASPLAKLADH- 247

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +P           P+TS    +   D L   +     
Sbjct: 248 -LIPVVAFETDFIYKPSTSRYAMMMAIDVLVTGVALRLG 285


>gi|23099402|ref|NP_692868.1| hypothetical protein OB1947 [Oceanobacillus iheyensis HTE831]
 gi|22777631|dbj|BAC13903.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 209

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY      +L +  +    V         VK    + DAI+ +  +  G + VVD+   L
Sbjct: 58  FYTGKTASELLSEKIKKYKVHEFQQVPVAVKESVSVYDAISTMFLEDVGTLFVVDDHACL 117

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R    H+DL ++ V  +M + P   V   D LL  A   L    I  L V
Sbjct: 118 TGVLSRKDLLRTSMGHQDLTSIPVHIIMTRMPNITVCRRDDLLIDAAHNLISKQIDGLPV 177

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V D ++    +G +    + + 
Sbjct: 178 VKDTERGLEVVGRITKTTMTKL 199


>gi|317498860|ref|ZP_07957145.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
 gi|316893856|gb|EFV16053.1| 6-phospho 3-hexuloisomerase [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 126

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 10/127 (7%)

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G  ++ +      H   G     DL+I+ S SG +D L +I   A+   + L  +T 
Sbjct: 1   MHLGFQAYVIGEISTPHTKAG-----DLLIITSGSGETDALVSIAKKAKESGLYLGLVTM 55

Query: 147 ENKSVVACHADIVLTLP---KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSE 201
             +S +   AD ++ LP   K      H + P  S   Q++    DA+ + L+E+ N + 
Sbjct: 56  NPQSTLGKMADGMIILPGDSKGNNEEKHSIQPMGSQFEQMSFLIFDAIVLKLMENWNQTS 115

Query: 202 NDFYVLH 208
              ++ H
Sbjct: 116 EQMFMRH 122


>gi|255011932|ref|ZP_05284058.1| inosine 5-monophosphate dehydrogenase [Bacteroides fragilis 3_1_12]
 gi|313149768|ref|ZP_07811961.1| inositol-5-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
 gi|313138535|gb|EFR55895.1| inositol-5-monophosphate dehydrogenase [Bacteroides fragilis
           3_1_12]
          Length = 497

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  LAI L  +RN   +  +   P      +            +   
Sbjct: 51  NIPFVSAIMQSVSGPELAIEL--ARNGGLSFIFGSQPIASQAEMVRKVKKFKAGFVTSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +     L D + +L +     + + D+      L G++T  D      +D     ++D 
Sbjct: 109 NLTPEHTLDDVLRLLRQTGHSTIGITDDGTPNGHLLGLVTSRDYR--LSRDPLDKKIKDF 166

Query: 289 MIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKA 326
           M    K+I+ +    L+ A Q++  H ++ L ++D   + 
Sbjct: 167 MTPFDKLIVGEVGLTLSEANQIIWDHKLNTLPIIDKDGRL 206


>gi|282910586|ref|ZP_06318389.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|282325191|gb|EFB55500.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           WBG10049]
 gi|312438619|gb|ADQ77690.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus TCH60]
          Length = 461

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D     +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQDHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|227820101|ref|YP_002824072.1| inosine-5'-monophosphate dehydrogenase [Sinorhizobium fredii
           NGR234]
 gi|227339100|gb|ACP23319.1| Inosine-5'-monophosphate dehydrogenase related protein
           [Sinorhizobium fredii NGR234]
          Length = 166

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 46/115 (40%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNFHKDLNTLS 284
               +  V           ++ E   G + V V     + GI+T+ DI  +      + S
Sbjct: 20  MSRQVYTVSPTDTAQSVARLMKETGVGALPVEVPGVGTILGIVTDRDILTSVVAQALSTS 79

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V + M    +   E   + +A Q +    I  L+VVD+ + A GI+   D++R
Sbjct: 80  TAVFEFMTVAAESCEEGDSILLAAQKMHDLRIRQLVVVDEKRHAAGIIALADIIR 134



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 1/57 (1%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDLL 336
             + V DVM +    +          +L+++  +  L V V      +GIV   D+L
Sbjct: 12  KAMRVRDVMSRQVYTVSPTDTAQSVARLMKETGVGALPVEVPGVGTILGIVTDRDIL 68


>gi|13471096|ref|NP_102665.1| hypothetical protein mlr0980 [Mesorhizobium loti MAFF303099]
 gi|14021840|dbj|BAB48451.1| mlr0980 [Mesorhizobium loti MAFF303099]
          Length = 145

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 48/114 (42%), Gaps = 1/114 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
           +   + +V +   +  A   LS    G VAV +     +G++++ D+ R+     + T  
Sbjct: 10  TSSRLAVVDVNATVQAAALSLSRPGIGLVAVCNGNGAAEGVLSKSDLVRHLANPTDPTPP 69

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V  +M            L    Q +   N+  ++VVD+  + +G++   D ++ 
Sbjct: 70  VSVLMSSPIVSCGPQDDLHSVWQTMAGLNLQNILVVDNGARPVGMLDIRDAMKA 123


>gi|307706547|ref|ZP_07643354.1| SIS domain protein [Streptococcus mitis SK321]
 gi|307618002|gb|EFN97162.1| SIS domain protein [Streptococcus mitis SK321]
          Length = 228

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 34/162 (20%), Positives = 71/162 (43%), Gaps = 12/162 (7%)

Query: 37  GLSSLESSLQGE-LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            +  L++S+Q E L  Q     + I   K +V+  G+G S  +    +   +  G  SF 
Sbjct: 56  AIQFLQTSVQDEALKKQLSEIADLIVQAK-QVIFLGVGTSLSLAEYGSYLFSEIGILSFA 114

Query: 96  VH----AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           +     + +  H +L     D L+I LS SG ++E+  ++   +  +  ++++T+ + S 
Sbjct: 115 ITNPFYSLKLHHSNL----EDVLVIALSVSGETEEVLTLVQGFKERNAKIVSLTNTDIST 170

Query: 152 VACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           ++  +DI L+  +P             T+ I  +     L +
Sbjct: 171 LSQLSDINLSYFMPVAYADSSLRSTNLTTQIPVVLFFRILTL 212


>gi|258423514|ref|ZP_05686404.1| magnesium transporter [Staphylococcus aureus A9635]
 gi|257846215|gb|EEV70239.1| magnesium transporter [Staphylococcus aureus A9635]
          Length = 461

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D     +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQDHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|284162375|ref|YP_003400998.1| signal transduction protein [Archaeoglobus profundus DSM 5631]
 gi|284012372|gb|ADB58325.1| putative signal transduction protein with CBS domains
           [Archaeoglobus profundus DSM 5631]
          Length = 126

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 55/117 (47%), Gaps = 5/117 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIFRNF---HKDLN 281
               +  ++    + +AI ++ E+R   + V   +     G++T  DI         D N
Sbjct: 9   MNRRLEFIEADASVKEAIDLMLERRIRSLLVKPRDENDCYGVVTARDIVFGVFANDLDPN 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V D+  K    + + T L   ++ +++ NI+ + V+DD  + +G+V  +D+++ 
Sbjct: 69  NVKVGDIASKPIVTVPKGTELKDVIRFMKRFNIARVFVLDD-GRIVGVVALMDIMKA 124



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L VEDVM +  + I  D  +  A+ L+ +  I  L+V   D     G+V   D++
Sbjct: 3   LRVEDVMNRRLEFIEADASVKEAIDLMLERRIRSLLVKPRDENDCYGVVTARDIV 57


>gi|261343849|ref|ZP_05971494.1| transcriptional regulator HexR [Providencia rustigianii DSM 4541]
 gi|282568236|gb|EFB73771.1| transcriptional regulator HexR [Providencia rustigianii DSM 4541]
          Length = 281

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 33/175 (18%), Positives = 66/175 (37%), Gaps = 7/175 (4%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           +   +   GL +++ +L        + AV+ +   + ++   G G S  +     +    
Sbjct: 97  KIFESAMAGLDNVKHTLD---ISAINRAVDLLTQAR-KISFFGFGASAAVAHDAMNKFFR 152

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
              P  +                 D+I+++S +G +  L  +   AR     +IAITSE 
Sbjct: 153 FNIPVIYFDDIVMQRMSCMNSGDGDVIVLISHTGRTKALVDMAQLARSNDATVIAITSE- 211

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            S ++  A + + +    ++  +   P  S + QLA+ D L       R     D
Sbjct: 212 DSPLSLEATLSIIIDVPEDTDMY--MPMVSRMAQLAVIDVLTTGFTLRRGEKFRD 264


>gi|158340839|ref|YP_001522007.1| two-component hybrid sensor and regulator [Acaryochloris marina
           MBIC11017]
 gi|158311080|gb|ABW32693.1| two-component hybrid sensor and regulator [Acaryochloris marina
           MBIC11017]
          Length = 1549

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 54/134 (40%), Gaps = 28/134 (20%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDE---------------------GQKLKGIITEG 270
           +     PL + I + S     C  + DE                       ++ GI+TE 
Sbjct: 19  IAAPDTPLTEVIGLTSRSALHCHLMADEVNQPTLPQLGIEQTGCVLFEEDTQMVGILTER 78

Query: 271 DIFRNFHKD--LNTLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKA 326
           DI R   ++  L  L+   VM +    +++D  + +  A++ + + +I  L V+D   + 
Sbjct: 79  DIVRLIAENRSLGELTAAAVMSQPVVTLVDDGHSTVFTALERMNRQHIRHLPVLDQQGQV 138

Query: 327 IGIVH---FLDLLR 337
            G++      +LL+
Sbjct: 139 KGLLTPRRIRNLLQ 152



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 43/110 (39%), Gaps = 8/110 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVD------EGQKLKGIITEGDIFR--NFHKDLNTLSVE 286
               L+     ++ +   C+ +V+      E     GIITE DI +      D      +
Sbjct: 175 PTNSLLQITQCMNLQGVSCIVMVEPADDLTENHCPIGIITERDIVQFQRLELDFAQTQAQ 234

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +VM     ++  D  L    Q ++Q  +  L+V D      GIV   +LL
Sbjct: 235 EVMSTPLSLVTPDDSLWTVHQKMQQQKVRRLVVADGHGTLRGIVTQRNLL 284



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 39/222 (17%), Positives = 74/222 (33%), Gaps = 24/222 (10%)

Query: 128 KAILYYARRFSIPL---IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
             +         PL   I +TS   S + CH      +  E                 L 
Sbjct: 13  LDLQPLIAAPDTPLTEVIGLTSR--SALHCH-----LMADEVNQPTLPQLGIEQTGCVLF 65

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D   + +L  R+            G+L      A+ VM       +      +  A+ 
Sbjct: 66  EEDTQMVGILTERDIVRL-IAENRSLGEL-----TAAAVMSQPVVTLVDDGHSTVFTALE 119

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDTLL 302
            ++ +    + V+D+  ++KG++T   I         L    V +VM  +    L    L
Sbjct: 120 RMNRQHIRHLPVLDQQGQVKGLLTPRRIRNLLQPSDLLKIRRVREVMTPDVVQALPTNSL 179

Query: 303 TVAMQLLRQHNISVLMVVD------DCQKAIGIVHFLDLLRF 338
               Q +    +S +++V+      +    IGI+   D+++F
Sbjct: 180 LQITQCMNLQGVSCIVMVEPADDLTENHCPIGIITERDIVQF 221


>gi|170742193|ref|YP_001770848.1| CBS domain-containing protein [Methylobacterium sp. 4-46]
 gi|168196467|gb|ACA18414.1| CBS domain containing membrane protein [Methylobacterium sp. 4-46]
          Length = 400

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 42/189 (22%), Positives = 65/189 (34%), Gaps = 23/189 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDF-YVLHPGGKLGTLFVCASDVMHSGDSIP 231
            AP TS     A  DA      E  +    D   +LH      +     S    S  S  
Sbjct: 186 PAPFTSLGFTGADLDAALEDFGEFVDIGRADLDAILHHALLRASRRALGSATCASVLSRA 245

Query: 232 LV--KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS----- 284
           +V       L +A+ +   +R   +AV DEG ++ G++T  D+      + N        
Sbjct: 246 VVGIAPDASLDEALALFRRRRIRALAVTDEGARVVGLLTHHDLIDKAAWNRNGPRLDLPR 305

Query: 285 ---------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                          V DVM      +  +T L  A   + Q  +  L VV    + IG+
Sbjct: 306 RLRLTLARGRAPHHCVADVMTTPVIPVRPETPLADAALWMSQAGLVHLPVVGPDDRLIGL 365

Query: 330 VHFLDLLRF 338
           V   D++  
Sbjct: 366 VSQGDVVNA 374



 Score = 39.5 bits (91), Expect = 0.70,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 22/44 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V+   PL DA   +S+     + VV    +L G++++GD+    
Sbjct: 332 VRPETPLADAALWMSQAGLVHLPVVGPDDRLIGLVSQGDVVNAL 375


>gi|238789724|ref|ZP_04633507.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
 gi|238722277|gb|EEQ13934.1| Transcriptional regulator, RpiR family [Yersinia frederiksenii ATCC
           33641]
          Length = 245

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/129 (24%), Positives = 59/129 (45%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A + RV+  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDMAAAQIAATR-RVIFVGIGTSGALGKYSARFFSNIGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I       +  +I++T+ + S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIILSVSGETEEIIRIANQFSLHNCKIISLTNSDNSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|253999919|ref|YP_003051982.1| CBS domain-containing membrane protein [Methylovorus sp. SIP3-4]
 gi|253986598|gb|ACT51455.1| CBS domain containing membrane protein [Methylovorus sp. SIP3-4]
          Length = 391

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 22/150 (14%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                F           S+  V+ G  L +A  +L       + V+D+ +++ GIIT+GD
Sbjct: 232 AYRRRFGEIRCQDIMSRSLITVEFGTTLEEAWQLLLRHHLKALPVLDKARRVSGIITQGD 291

Query: 272 IFR------------NFHKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLR 310
             R               + +  +          V  +M         D  +   + L+ 
Sbjct: 292 FMRQADLAGYQGIASKLKQVVQRIPFTHTDKPEVVGQIMTNRVITASTDMHIVELIPLVS 351

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +HN+  + VVD  ++  G++   DL+  G+
Sbjct: 352 EHNLHHIPVVDQERRLAGMISQSDLI-AGL 380



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              + +    +  +D+M ++   +   T L  A QLL +H++  L V+D  ++  GI+  
Sbjct: 230 MHAYRRRFGEIRCQDIMSRSLITVEFGTTLEEAWQLLLRHHLKALPVLDKARRVSGIITQ 289

Query: 333 LDLLR 337
            D +R
Sbjct: 290 GDFMR 294


>gi|219850739|ref|YP_002465171.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219544998|gb|ACL15448.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 292

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 3/102 (2%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKV 295
             + +AI +   +      V+D+   +KGI+T  DI R   + L  +  V  VM  +   
Sbjct: 188 ATISEAIHLFHTRNIHGAPVMDDE-AMKGIVTISDIVRAIDEGLPVSAPVSTVMTPDVIE 246

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                 L   ++  ++  I  L+VV +    +GI+   D+LR
Sbjct: 247 ADGGVRLFEVVKRFKEREIGRLIVV-ENGSPVGILTQSDVLR 287



 Score = 46.0 bits (108), Expect = 0.007,   Method: Composition-based stats.
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  L +   M      +     ++ A+ L    NI    V+DD     GIV   D++R 
Sbjct: 168 LPKLPIRCYMSTPLLTLATSATISEAIHLFHTRNIHGAPVMDDE-AMKGIVTISDIVRA 225


>gi|86159426|ref|YP_466211.1| signal-transduction protein [Anaeromyxobacter dehalogenans 2CP-C]
 gi|85775937|gb|ABC82774.1| putative signal-transduction protein with CBS domains
           [Anaeromyxobacter dehalogenans 2CP-C]
          Length = 139

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 52/118 (44%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
             H    +  ++   P+ +A  ++SE++ G VAV D G ++ G++TE D+          
Sbjct: 5   HKHVTREMVSLEATAPIREAARLMSERKIGSVAVRD-GGRIVGLVTERDLVATVLARGAD 63

Query: 283 L--SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               + + M +    +           L+R H    L+V ++  + +G+V   D+++ 
Sbjct: 64  ANHPMREAMRQGLPRVSTSASEVEVAGLMRDHTTRHLLV-EEGGQVVGVVSMRDIIQL 120


>gi|254248413|ref|ZP_04941733.1| hypothetical protein BCPG_03244 [Burkholderia cenocepacia PC184]
 gi|124874914|gb|EAY64904.1| hypothetical protein BCPG_03244 [Burkholderia cenocepacia PC184]
          Length = 184

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D G +L  I+T+ D+  R   H      
Sbjct: 49  MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-GTELVAIVTDRDLAVRALSHGHSPDT 107

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V  +  +  +ED  +    Q +    +  L V+D   K +G+V   D+  R G
Sbjct: 108 PVQAVASRPVQWCVEDDGVGDVQQRMADVQLHRLPVLDRSLKLVGMVSLGDIATRAG 164



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 28/60 (46%), Gaps = 1/60 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             K+     V ++M ++   +     +  A +L+++ +I VL V D  +  + IV   DL
Sbjct: 36  ITKEAFMYRVNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDGTE-LVAIVTDRDL 94


>gi|86360659|ref|YP_472547.1| transcriptional regulator protein [Rhizobium etli CFN 42]
 gi|86284761|gb|ABC93820.1| probable transcriptional regulator protein [Rhizobium etli CFN 42]
          Length = 255

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 67/195 (34%), Gaps = 12/195 (6%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H    + K  ++             A   I   +  L  L  SL          AV  I 
Sbjct: 43  HIGVRYLKPESKSTEPA------DVAQDIITKAQNALFLLHRSLD---LAAIEAAVAHIA 93

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +        G S  I  +L + L   G                      D++I  S+S
Sbjct: 94  KAEMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFS 153

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + EL      AR+  +  IA+T +  S VA  A+IV+ +     +  +   PT++ I 
Sbjct: 154 GRNMELVRAFELARQNKVKTIALT-QTDSPVAKAAEIVVPIDLPEGNNIYR--PTSTRIA 210

Query: 182 QLAIGDALAIALLES 196
            +A  D L+  +  +
Sbjct: 211 YIATVDILSSLVAYA 225


>gi|323440838|gb|EGA98546.1| magnesium transporter [Staphylococcus aureus O11]
 gi|323443873|gb|EGB01485.1| magnesium transporter [Staphylococcus aureus O46]
          Length = 461

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D     +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQDHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|18312360|ref|NP_559027.1| hypothetical protein PAE1028 [Pyrobaculum aerophilum str. IM2]
 gi|18159810|gb|AAL63209.1| conserved protein with 2 CBS domains [Pyrobaculum aerophilum str.
           IM2]
          Length = 127

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 51/113 (45%), Gaps = 2/113 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSV 285
            D++       P+  A+  +     G V V+D   +  GI+TE DI R   ++++    +
Sbjct: 8   KDNVIFCYADEPVECAVAKMYAANVGSVVVMDRANRPVGIVTERDIVRFLAQEIDLKTPL 67

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           E V  K+   +  +  +  A   + ++NI  + VV+  +    ++   D+LR 
Sbjct: 68  EQVAKKSLITVSPEESIVSAAAKMIENNIRHMPVVEGGRVVG-VISIRDVLRA 119



 Score = 40.7 bits (94), Expect = 0.32,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V D++  N      D  +  A+  +   N+  ++V+D   + +GIV   D++RF
Sbjct: 1   MKVRDLLKDNVIFCYADEPVECAVAKMYAANVGSVVVMDRANRPVGIVTERDIVRF 56


>gi|49483171|ref|YP_040395.1| divalent cation transport protein [Staphylococcus aureus subsp.
           aureus MRSA252]
 gi|257425059|ref|ZP_05601485.1| magnesium transporter [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257427723|ref|ZP_05604121.1| magnesium transporter [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257430358|ref|ZP_05606740.1| magnesium transporter [Staphylococcus aureus subsp. aureus 68-397]
 gi|257433062|ref|ZP_05609420.1| magnesium transporter [Staphylococcus aureus subsp. aureus E1410]
 gi|257435959|ref|ZP_05612006.1| magnesium transporter [Staphylococcus aureus subsp. aureus M876]
 gi|282903555|ref|ZP_06311443.1| magnesium transporter [Staphylococcus aureus subsp. aureus C160]
 gi|282905329|ref|ZP_06313184.1| magnesium transporter [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282908302|ref|ZP_06316133.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282913782|ref|ZP_06321569.1| magnesium transporter [Staphylococcus aureus subsp. aureus M899]
 gi|282923815|ref|ZP_06331491.1| magnesium transporter [Staphylococcus aureus subsp. aureus C101]
 gi|283957752|ref|ZP_06375203.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|293500820|ref|ZP_06666671.1| magnesium transporter [Staphylococcus aureus subsp. aureus 58-424]
 gi|293509775|ref|ZP_06668484.1| magnesium transporter [Staphylococcus aureus subsp. aureus M809]
 gi|293526361|ref|ZP_06671046.1| magnesium transporter [Staphylococcus aureus subsp. aureus M1015]
 gi|295427496|ref|ZP_06820128.1| magnesium transporter [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297591554|ref|ZP_06950192.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus MN8]
 gi|49241300|emb|CAG39981.1| putative divalent cation transport protein [Staphylococcus aureus
           subsp. aureus MRSA252]
 gi|257272035|gb|EEV04167.1| magnesium transporter [Staphylococcus aureus subsp. aureus 55/2053]
 gi|257274564|gb|EEV06051.1| magnesium transporter [Staphylococcus aureus subsp. aureus 65-1322]
 gi|257278486|gb|EEV09105.1| magnesium transporter [Staphylococcus aureus subsp. aureus 68-397]
 gi|257281155|gb|EEV11292.1| magnesium transporter [Staphylococcus aureus subsp. aureus E1410]
 gi|257284241|gb|EEV14361.1| magnesium transporter [Staphylococcus aureus subsp. aureus M876]
 gi|282313787|gb|EFB44179.1| magnesium transporter [Staphylococcus aureus subsp. aureus C101]
 gi|282321850|gb|EFB52174.1| magnesium transporter [Staphylococcus aureus subsp. aureus M899]
 gi|282327967|gb|EFB58249.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           WW2703/97]
 gi|282330621|gb|EFB60135.1| magnesium transporter [Staphylococcus aureus subsp. aureus Btn1260]
 gi|282595173|gb|EFC00137.1| magnesium transporter [Staphylococcus aureus subsp. aureus C160]
 gi|283789901|gb|EFC28718.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           A017934/97]
 gi|290920433|gb|EFD97496.1| magnesium transporter [Staphylococcus aureus subsp. aureus M1015]
 gi|291095825|gb|EFE26086.1| magnesium transporter [Staphylococcus aureus subsp. aureus 58-424]
 gi|291467225|gb|EFF09742.1| magnesium transporter [Staphylococcus aureus subsp. aureus M809]
 gi|295127854|gb|EFG57488.1| magnesium transporter [Staphylococcus aureus subsp. aureus EMRSA16]
 gi|297576440|gb|EFH95156.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus MN8]
 gi|315193668|gb|EFU24063.1| hypothetical protein CGSSa00_09689 [Staphylococcus aureus subsp.
           aureus CGS00]
          Length = 461

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D     +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQDHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|13477000|ref|NP_108570.1| 6-phospho-3-hexuloisomerase [Mesorhizobium loti MAFF303099]
 gi|14027763|dbj|BAB54356.1| 6-phospho-3-hexuloisomerase [Mesorhizobium loti MAFF303099]
          Length = 188

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/155 (19%), Positives = 53/155 (34%), Gaps = 6/155 (3%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L  L   L      Q   A + +   + ++V+ G G+        A  L   G P   V
Sbjct: 12  ALDELSGVLARVDDSQIDAACKLLAEAR-QIVVYGCGREALQVKGFAMRLYHLGLPVSVV 70

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
               A       +   D+ +  S  G +  +  ++  AR      + +T++     A  A
Sbjct: 71  GDMTAPP-----LGPGDVFLASSGPGETSTVLTLMRVAREAGATNLLLTAQAGGSAAKRA 125

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           D  L +P +  +   G   T+   M      AL +
Sbjct: 126 DTTLLIPAQTMANDQGPQKTSVLPMGSVFEGALFL 160


>gi|289677451|ref|ZP_06498341.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae FF5]
 gi|330898719|gb|EGH30138.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. japonica str. M301072PT]
          Length = 288

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|316932763|ref|YP_004107745.1| putative signal transduction protein [Rhodopseudomonas palustris
           DX-1]
 gi|315600477|gb|ADU43012.1| putative signal transduction protein with CBS domains
           [Rhodopseudomonas palustris DX-1]
          Length = 338

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 30/139 (21%), Positives = 47/139 (33%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
              +I  V+   P+      L       V VVD      GI++EGD+             
Sbjct: 7   MTTAIVTVQPDTPVHAIAETLLRHGISAVPVVDGHGAPLGIVSEGDLMPRDDTAREARHD 66

Query: 274 ---------RNFHKDL------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       H D       +T +  DVM+     + E   L     +L +  I  + 
Sbjct: 67  WWLQILSEGEAVHPDYLRFLKSDTRTARDVMVGPVVTVEETAALADVADVLVEKRIKRVP 126

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+    + +GIV   DLL+
Sbjct: 127 VL-RAGRIVGIVSRADLLK 144



 Score = 55.7 bits (133), Expect = 9e-06,   Method: Composition-based stats.
 Identities = 17/54 (31%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   DVM      +  DT +    + L +H IS + VVD     +GIV   DL+
Sbjct: 1   MKAADVMTTAIVTVQPDTPVHAIAETLLRHGISAVPVVDGHGAPLGIVSEGDLM 54


>gi|258406571|ref|YP_003199313.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
 gi|257798798|gb|ACV69735.1| Cl- channel voltage-gated family protein [Desulfohalobium retbaense
           DSM 5692]
          Length = 605

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 25/119 (21%), Positives = 42/119 (35%), Gaps = 4/119 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
                 D++        V  G          S+       VV+   +L GI T  DI   
Sbjct: 463 QSFRVRDLLGQIRKFVTVPEGMSFAKFKEFFSDTTQDYFPVVNTRNELSGIFTNRDIRTI 522

Query: 276 -FHKDLNTLSV-EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIV 330
            F  +++ L V +D+   +      D  L   M    + N+  L VVD  +    +G++
Sbjct: 523 LFAPEVDDLVVVKDIATTDLITTNPDEDLGTVMTKFTKKNLDCLPVVDVQNPNHLLGML 581


>gi|195940999|ref|ZP_03086381.1| transcriptional regulator [Escherichia coli O157:H7 str. EC4024]
          Length = 285

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 3/154 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++  +L  +       A + +    G+V   GIG S                    +   
Sbjct: 112 AINETLALQEEQALVRAADYLSNA-GQVYFYGIGMSAISVLYAKYRFMRIMANVDALIDN 170

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                +   + + D+++ +S SG + ++   L   +      I I+    S ++ +AD+V
Sbjct: 171 HTMTLNSNNVGKKDVVVAISHSGETRDVVDALKRVKEKGAVTIVISKLQHSSLSQYADVV 230

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           L       S P+    +T    Q  + D L  AL
Sbjct: 231 LLTG--GTSNPYQSDSSTITAAQSFMVDVLFNAL 262


>gi|52786451|ref|YP_092280.1| YqzB [Bacillus licheniformis ATCC 14580]
 gi|52348953|gb|AAU41587.1| YqzB [Bacillus licheniformis ATCC 14580]
          Length = 234

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 83  FYTGKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDDNAIL 142

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P +     D  +    ++L +  I  L V
Sbjct: 143 VGVLSRKDLLRASIGKQELPSIPVHIIMTRMPNITLCRRDDFILDIAKMLIEKQIDALPV 202

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V D +K    +G +   ++ + 
Sbjct: 203 VKDTEKGYEVVGRITKTNMTKI 224



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L  L V+D     P VI E+  +  A+  +   ++  L VVDD    +G++   DL
Sbjct: 93  LADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDDNAILVGVLSRKDL 151

Query: 336 LRFGI 340
           LR  I
Sbjct: 152 LRASI 156


>gi|27379754|ref|NP_771283.1| hypothetical protein bll4643 [Bradyrhizobium japonicum USDA 110]
 gi|27352907|dbj|BAC49908.1| bll4643 [Bradyrhizobium japonicum USDA 110]
          Length = 130

 Score = 66.5 bits (161), Expect = 6e-09,   Method: Composition-based stats.
 Identities = 29/111 (26%), Positives = 44/111 (39%), Gaps = 24/111 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHKDLNT-------- 282
           VK    L+DAI +L E     + VVD    L GII+EGD    R    D           
Sbjct: 14  VKPSASLLDAIHLLLETNQRGLPVVDGEGVLVGIISEGDFLHRRKLGVDYPEGIWLEWPL 73

Query: 283 --------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                         L V+ VM ++P  + E   +   ++ +  + IS ++V
Sbjct: 74  GKDEGQLARERTSGLRVDAVMSRHPVCVDESATIEEVVKQMDIYQISQVLV 124



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 3/61 (4%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL---RFG 339
           +   DVM      +     L  A+ LL + N   L VVD     +GI+   D L   + G
Sbjct: 1   MKAADVMRTWFATVKPSASLLDAIHLLLETNQRGLPVVDGEGVLVGIISEGDFLHRRKLG 60

Query: 340 I 340
           +
Sbjct: 61  V 61


>gi|261212161|ref|ZP_05926447.1| putative acetoin utilization protein AcuB [Vibrio sp. RC341]
 gi|260838769|gb|EEX65420.1| putative acetoin utilization protein AcuB [Vibrio sp. RC341]
          Length = 149

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 11/117 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
               +   +     L DA  ++       + VVD  +KL GI+T+ D+      +L    
Sbjct: 7   MMTRNPHTLLRTHTLNDAKHLMEALDIRHIPVVDANKKLLGIVTQRDLLAAQESNLQRIA 66

Query: 282 -------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                     + +VM  +   ++    L  +   +++H I  L VV   +  +GI+ 
Sbjct: 67  QDPSYTLDTPLYEVMHTDVMSVVPQAGLKESALYMQKHKIGCLPVVAKSE-LVGIIT 122



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M +NP  +L    L  A  L+   +I  + VVD  +K +GIV   DLL  
Sbjct: 3   KVEDMMTRNPHTLLRTHTLNDAKHLMEALDIRHIPVVDANKKLLGIVTQRDLLAA 57


>gi|289578819|ref|YP_003477446.1| signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter italicus Ab9]
 gi|297545039|ref|YP_003677341.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
 gi|289528532|gb|ADD02884.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter italicus Ab9]
 gi|296842814|gb|ADH61330.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter mathranii subsp. mathranii str. A3]
          Length = 435

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   + +E +     VVD    L G++T  D+      D     +  +M  NP 
Sbjct: 202 PQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVATASEDD----KIGSIMTPNPV 257

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + T L+ A  L+   N+ +L V    ++ IG++   D+++ 
Sbjct: 258 FVTDTTTLSYAAHLMIWWNVEILPVT-RGRQLIGLISREDVIKA 300



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V DVM  NP  ++    +    +L  +   +   VVD     +G+V   D
Sbjct: 189 VSDVMTYNPIYMMPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRD 238


>gi|225574559|ref|ZP_03783169.1| hypothetical protein RUMHYD_02636 [Blautia hydrogenotrophica DSM
           10507]
 gi|225038226|gb|EEG48472.1| hypothetical protein RUMHYD_02636 [Blautia hydrogenotrophica DSM
           10507]
          Length = 277

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/99 (22%), Positives = 44/99 (44%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
                PL+ A+  +   +   + VVD+ +   G++   DI +   K      ++DVM   
Sbjct: 160 CPPSFPLVRAVEKMRSNKVDSLMVVDKTKNFLGVVRTKDIRQLDEKKGL---IKDVMHPP 216

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                 DT +   ++ L+ H+ S + V+D+  K  G++ 
Sbjct: 217 ILSTNPDTDIVTILKELKTHSTSNVPVIDEDGKLCGLIT 255



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           N + V D+MI  P        L  A++ +R + +  LMVVD  +  +G+V   D+
Sbjct: 145 NFIKVRDIMITEPISCPPSFPLVRAVEKMRSNKVDSLMVVDKTKNFLGVVRTKDI 199


>gi|161528286|ref|YP_001582112.1| signal transduction protein [Nitrosopumilus maritimus SCM1]
 gi|160339587|gb|ABX12674.1| putative signal transduction protein with CBS domains
           [Nitrosopumilus maritimus SCM1]
          Length = 140

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/122 (25%), Positives = 61/122 (50%), Gaps = 8/122 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
              ++  ++      DA +IL EK      V+ + +K  G+I+E DI +    +    S 
Sbjct: 8   MQKNVITIEYDKTAHDAASILKEKEI-SFLVIIKDEKPIGVISERDIVQKVTAEDQKASS 66

Query: 285 --VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL---LRFG 339
             +ED+M K  + +  DT +  A+Q +  +NI  L++++D  K +G++   +L   LR  
Sbjct: 67  VLIEDIMSKKFRWVSPDTPIEDAVQKMLNNNIRRLIILEDE-KLVGVITQTNLAEFLRSK 125

Query: 340 II 341
           ++
Sbjct: 126 LL 127



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D+M KN   I  D     A  +L++  IS L+++   +K IG++   D+++ 
Sbjct: 4   VRDIMQKNVITIEYDKTAHDAASILKEKEISFLVII-KDEKPIGVISERDIVQK 56


>gi|126699953|ref|YP_001088850.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile 630]
 gi|254975918|ref|ZP_05272390.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-66c26]
 gi|255093305|ref|ZP_05322783.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile CIP
           107932]
 gi|255101484|ref|ZP_05330461.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-63q42]
 gi|255307358|ref|ZP_05351529.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile ATCC
           43255]
 gi|255315051|ref|ZP_05356634.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-76w55]
 gi|255517721|ref|ZP_05385397.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-97b34]
 gi|255650834|ref|ZP_05397736.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-37x79]
 gi|255656308|ref|ZP_05401717.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-23m63]
 gi|260683914|ref|YP_003215199.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile CD196]
 gi|260687574|ref|YP_003218708.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           R20291]
 gi|296450249|ref|ZP_06892010.1| IMP dehydrogenase [Clostridium difficile NAP08]
 gi|296878664|ref|ZP_06902669.1| IMP dehydrogenase [Clostridium difficile NAP07]
 gi|306520728|ref|ZP_07407075.1| inosine 5-monophosphate dehydrogenase [Clostridium difficile
           QCD-32g58]
 gi|115251390|emb|CAJ69222.1| Inositol-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
           (IMPD) [Clostridium difficile]
 gi|260210077|emb|CBA64179.1| inosine-5'-monophosphate dehydrogenase [Clostridium difficile
           CD196]
 gi|260213591|emb|CBE05377.1| inosine-5'-monophosphate dehydrogenase [Clostridium difficile
           R20291]
 gi|296261012|gb|EFH07846.1| IMP dehydrogenase [Clostridium difficile NAP08]
 gi|296430471|gb|EFH16313.1| IMP dehydrogenase [Clostridium difficile NAP07]
          Length = 499

 Score = 66.5 bits (161), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/192 (21%), Positives = 68/192 (35%), Gaps = 21/192 (10%)

Query: 149 KSVVACHADIVLTLPK-----EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            S     A++ L  P        E+  +   P TSAIMQ    D +AIAL +    S   
Sbjct: 22  SSTDCIPANVSLKTPVTKFKKGEEADIYMNIPLTSAIMQSVSDDKMAIALAKEGGIS--- 78

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDE 259
              ++    +       + V        +    +K    L D + +  +     VAV ++
Sbjct: 79  --FIYGSQTIENEAAMVARVKSHKAGFVVSDSNIKPDNTLKDILDLKEKTGHSTVAVTED 136

Query: 260 G---QKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNI 314
           G    KL GI+   D      +      V + M    +     +D  L  A  ++  H +
Sbjct: 137 GTSTGKLLGIVASRDYR--ISRMDLDTKVSEFMTPMSSIVYANKDVTLKEANNIIWDHKL 194

Query: 315 SVLMVVDDCQKA 326
           + L V+DD    
Sbjct: 195 NSLPVLDDNGNL 206


>gi|332519267|ref|ZP_08395734.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Lacinutrix algicola 5H-3-7-4]
 gi|332045115|gb|EGI81308.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Lacinutrix algicola 5H-3-7-4]
          Length = 615

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/198 (20%), Positives = 76/198 (38%), Gaps = 15/198 (7%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           +E+I     R+++   G S H   +   +   LA    P    +A+E       +IT  D
Sbjct: 293 LERILNA-NRIIVIACGTSWHAGLVAEYIFEDLAR--IPVEVEYASE-FRYRNPVITEKD 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++I +S SG + +  A +  A+     +  + +   S +A            PE    G+
Sbjct: 349 VVIAISQSGETADTLAAIKLAKSKGAFVFGVCNVVGSSIARETHAGAYTHAGPE---IGV 405

Query: 174 APTTSAIMQLAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
           A T +   Q+ +   +A+ L + +   S++DF   H   +L  +       +   + I  
Sbjct: 406 ASTKAFTTQITVLTLIALKLAKEKGTISKSDFQ--HHLQELELIPSKVEKALKQDEHIKT 463

Query: 233 VKIGCPLIDAITILSEKR 250
           V       DA   L   R
Sbjct: 464 VA--ATYKDAKNCLYLGR 479


>gi|313680229|ref|YP_004057968.1| magnesium transporter [Oceanithermus profundus DSM 14977]
 gi|313152944|gb|ADR36795.1| magnesium transporter [Oceanithermus profundus DSM 14977]
          Length = 454

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/109 (17%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           V+ G  + + +  L            + V+D+   L G+++  D+         ++ V +
Sbjct: 149 VRAGMTVDEVLQFLRRAAPDAETVYYLYVLDDEGHLVGVLSLRDLIVA----DPSMRVAE 204

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M  +   +   T      +++  ++++V+ V DD  + +GIV   D++
Sbjct: 205 IMNPDVIHVTTGTDQEEVARVMADYDLTVVPVTDDAGRLVGIVTIDDVI 253



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 10/54 (18%), Positives = 22/54 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
               +  V  G    +   ++++     V V D+  +L GI+T  D+     ++
Sbjct: 206 MNPDVIHVTTGTDQEEVARVMADYDLTVVPVTDDAGRLVGIVTIDDVIDVLEEE 259


>gi|289622994|gb|ADD13476.1| transcriptional regulator [Lactobacillus casei]
          Length = 249

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 1/130 (0%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L ++L    +     AV+ I   +  + + G+G S  +          T  P  +  
Sbjct: 73  IDALRTTLANLDTDALTKAVKWITHAE-HLGLFGLGASNLVALDGYHKFLRTAIPVAYAA 131

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   D +I+ S SG   +  A+    ++  +PLI IT    S +   AD
Sbjct: 132 DYHMQLMAATHLGPRDAMILTSHSGEDKDAIALAELTKKQQVPLIVITGSPTSRLVKMAD 191

Query: 158 IVLTLPKEPE 167
                  E  
Sbjct: 192 AAFVAVAEES 201


>gi|282918707|ref|ZP_06326442.1| magnesium transporter [Staphylococcus aureus subsp. aureus C427]
 gi|282316517|gb|EFB46891.1| magnesium transporter [Staphylococcus aureus subsp. aureus C427]
          Length = 461

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 54/127 (42%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D     +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQDHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|257870711|ref|ZP_05650364.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus gallinarum EG2]
 gi|257804875|gb|EEV33697.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus gallinarum EG2]
          Length = 398

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 42/212 (19%), Positives = 74/212 (34%), Gaps = 31/212 (14%)

Query: 125 DELKAILYYAR-RFSIPLIAITSENKSVVACHADIVLTL--PKEPESCPHGLA--PTTSA 179
           D L+ ++   + R    ++ +T +    +   + IV+           P  +   P T+ 
Sbjct: 182 DSLQDLIKDLQERLGKTVVFVTHDMDEALKLASRIVIMSEGRVIQFDTPQNILRNPATTF 241

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL 239
           + +L   D L                       L               +   +     L
Sbjct: 242 VEELIGEDRL-----------------------LQAKPDTTPVKEVMLKTPIAITPEKSL 278

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILED 299
            +AI ++ EKR   + V D    LKG I    I RN  K     SV D++ K+   + E 
Sbjct: 279 QEAIRLMREKRVDTLLVTDNSNVLKGYIDVESIDRNRGK---VTSVGDILNKDVFYVKET 335

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            LL   +Q + +  +  + VVD     +GI+ 
Sbjct: 336 ALLRDTLQRILKRGLKYVPVVDAENHLVGILT 367


>gi|190895622|ref|YP_001985914.1| transcriptional regulator [Rhizobium etli CIAT 652]
 gi|190699567|gb|ACE93651.1| putative transcriptional regulator protein [Rhizobium etli CIAT
           652]
          Length = 287

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 67/195 (34%), Gaps = 12/195 (6%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H    + K  ++             A   I   +  L  L  SL          AV  I 
Sbjct: 75  HIGVRYLKPESKSTEPA------DVAQDIITKAQNALFLLHRSLD---LAAIEAAVAHIA 125

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
             +        G S  I  +L + L   G                      D++I  S+S
Sbjct: 126 KAEMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFS 185

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + EL      AR+  +  IA+T +  S VA  A+IV+ +     +  +   PT++ I 
Sbjct: 186 GRNLELVRAFELARQNKVKTIALT-QTDSPVAKAAEIVVPIDLPEGNNIYR--PTSTRIA 242

Query: 182 QLAIGDALAIALLES 196
            +A  D L+  +  +
Sbjct: 243 YIATVDILSSLVAYA 257


>gi|153956158|ref|YP_001396923.1| hypothetical protein CKL_3561 [Clostridium kluyveri DSM 555]
 gi|219856483|ref|YP_002473605.1| hypothetical protein CKR_3140 [Clostridium kluyveri NBRC 12016]
 gi|146349016|gb|EDK35552.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219570207|dbj|BAH08191.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 434

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 19/95 (20%), Positives = 47/95 (49%), Gaps = 4/95 (4%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            ++ +  +    V+D  +++ GI++  D+    + + +   +  +M K+P V+   T + 
Sbjct: 212 KVMEKVNYKIYPVIDNKKRVVGIVSSEDLS---NCNSDNEPLSKIMNKDPIVVKPKTTVA 268

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            A  ++    + V  VV + +K IGI+   D+++ 
Sbjct: 269 YAAHMMDLKGLEVFPVV-NHKKLIGIITKRDIIKA 302



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 +VK    +  A  ++  K      VV+  +KL GIIT+ DI +  H       V
Sbjct: 254 MNKDPIVVKPKTTVAYAAHMMDLKGLEVFPVVN-HKKLIGIITKRDIIKALHYMARQPQV 312

Query: 286 ED 287
            +
Sbjct: 313 GE 314



 Score = 39.1 bits (90), Expect = 0.87,   Method: Composition-based stats.
 Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 272 IFRNFHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           I R   ++L       VED+M  +P  + +   + V  +++ + N  +  V+D+ ++ +G
Sbjct: 174 INRALSENLIKKEIVLVEDIMQNDPCYLKDTDTVHVWKKVMEKVNYKIYPVIDNKKRVVG 233

Query: 329 IVHFLDL 335
           IV   DL
Sbjct: 234 IVSSEDL 240


>gi|126179740|ref|YP_001047705.1| CBS domain-containing protein [Methanoculleus marisnigri JR1]
 gi|125862534|gb|ABN57723.1| CBS domain containing protein [Methanoculleus marisnigri JR1]
          Length = 279

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 55/120 (45%), Gaps = 10/120 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               + +V     +  A  ++ + R   + V+ EG +L+GI+T+ DI             
Sbjct: 7   MASPVYVVAPEDNVAYARNLMLKHRVSRLPVM-EGDELRGILTKKDIAYRLRQTEPMWRR 65

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + ++ + V  +M   P  I  +T +     ++   +IS L VV++  K  GIV  LDL+R
Sbjct: 66  RPIDRIPVSILMALEPITIAPETGIRDIAAIMLDRDISGLPVVNE-GKVSGIVTKLDLMR 124



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 31/145 (21%), Positives = 51/145 (35%), Gaps = 30/145 (20%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--------F 273
            V    +    V     L   I  +  K    + VV++   L GIITE ++         
Sbjct: 134 QVSEIMEDAATVNRYHSLDHVIDTIKGKNDKLI-VVNDNGSLAGIITESNLAFYEYLDER 192

Query: 274 RNF-HKDLNTLS-------------------VEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            N   KD+  L                     ED+M +    +  D  L  A+ L+  H 
Sbjct: 193 MNLPKKDVTHLRKEGPAGQKRFRYVVEVSAVAEDIMSRPVITVSPDASLQDAVGLMLDHQ 252

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           I+ L+VV       G++   D+++ 
Sbjct: 253 INSLVVV-KDGDIRGMLKRDDIIKE 276



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 3/118 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                     +        +     + D   I+ ++    + VV+E  K+ GI+T+ D+ 
Sbjct: 65  RRPIDRIPVSILMALEPITIAPETGIRDIAAIMLDRDISGLPVVNE-GKVSGIVTKLDLM 123

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           R+ H    T  V ++M ++   +     L   +  ++  N   L+VV+D     GI+ 
Sbjct: 124 RSAHIRGLTAQVSEIM-EDAATVNRYHSLDHVIDTIKGKN-DKLIVVNDNGSLAGIIT 179



 Score = 38.3 bits (88), Expect = 1.5,   Method: Composition-based stats.
 Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 1/49 (2%)

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           DVM     V+  +  +  A  L+ +H +S L V++  +   GI+   D+
Sbjct: 5   DVMASPVYVVAPEDNVAYARNLMLKHRVSRLPVMEGDE-LRGILTKKDI 52


>gi|66048288|ref|YP_238129.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae B728a]
 gi|302187829|ref|ZP_07264502.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae 642]
 gi|63258995|gb|AAY40091.1| Helix-turn-helix protein RpiR:Sugar isomerase (SIS) [Pseudomonas
           syringae pv. syringae B728a]
 gi|330970254|gb|EGH70320.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. aceris str. M302273PT]
          Length = 288

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|117927740|ref|YP_872291.1| signal-transduction protein [Acidothermus cellulolyticus 11B]
 gi|117648203|gb|ABK52305.1| putative signal-transduction protein with CBS domains [Acidothermus
           cellulolyticus 11B]
          Length = 126

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 45/107 (42%), Gaps = 4/107 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
           V     L +    ++E++ G   V+D    + GIITE D+  +    ++ +   V   + 
Sbjct: 14  VGPNHTLREVARRMAERKVGAAVVIDPENGI-GIITERDLLESIAAGENPDAEPVSAHLT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +       D  L  A   + +     L+V+    + +G++   D++R
Sbjct: 73  RELVYAAPDWDLDQAATAMIRGGFRHLVVL-SGNEVVGVLAMRDIVR 118



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V D M      +  +  L    + + +  +   +V+D     IGI+   DLL
Sbjct: 1   MRVADAMNPLVLTVGPNHTLREVARRMAERKVGAAVVIDPENG-IGIITERDLL 53


>gi|222082530|ref|YP_002541895.1| inosine-5-monophosphate dehydrogenase protein [Agrobacterium
           radiobacter K84]
 gi|221727209|gb|ACM30298.1| inosine-5-monophosphate dehydrogenase protein [Agrobacterium
           radiobacter K84]
          Length = 161

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + +  +   ++ A   +++   G + V D   +L G+IT+ DI  R     +    
Sbjct: 24  MTHDVRITNLDETILSAAQTMADLDAGVLPVADHD-RLVGMITDRDIAIRGIAMGMGPDA 82

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V DVM  + K   +D  +    + +    +  L V+D  ++ +GI+   D+
Sbjct: 83  KVRDVMTSDVKYCFDDQEIDDVCRNMGDIQVRRLPVLDHNKRLVGILSLGDI 134



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V D M  + ++   D  +  A Q +   +  VL V D   + +G++   D+   GI
Sbjct: 18  MKVRDAMTHDVRITNLDETILSAAQTMADLDAGVLPVADHD-RLVGMITDRDIAIRGI 74


>gi|330952410|gb|EGH52670.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae Cit 7]
          Length = 288

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|323697882|ref|ZP_08109794.1| Polynucleotide adenylyltransferase region [Desulfovibrio sp. ND132]
 gi|323457814|gb|EGB13679.1| Polynucleotide adenylyltransferase region [Desulfovibrio
           desulfuricans ND132]
          Length = 895

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 60/154 (38%), Gaps = 10/154 (6%)

Query: 187 DALAIALLESRNFSE---NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAI 243
           DA A A ++ R  +E   + F + +       +               +++    + DA+
Sbjct: 288 DAAASATIKDRTLAEVRDDLFALFY-----SQINPQIVVDSLMSRPPVVIEGDKTMADAV 342

Query: 244 TILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLL 302
            +++      V VV +   +  GII      +     L  + + + M +  + +   T L
Sbjct: 343 ELMTRYGLKDVPVVAKDSMQCIGIIGHKIADKALSHHLGDVGLSEYMTRAFETVESSTDL 402

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              M+++  +   +L VV +  + +G++   DL 
Sbjct: 403 YRVMEIILSNRQRMLPVV-ENGELVGVITRTDLT 435



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 30/172 (17%), Positives = 59/172 (34%), Gaps = 9/172 (5%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             +    G     +    +   D +   +   + F   DF +L               + 
Sbjct: 199 AEQVTYLGELFKNAKTYDIHGVDVVVTEMSTDK-FVP-DFALLVHKLMDMEKIKVVFAMG 256

Query: 225 HSGDSIPLV----KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
              D I LV         +      L        A      +    + + D+F  F+  +
Sbjct: 257 RMADRIHLVARSKSPDVNVGRICASLGGGGHDAAASATIKDRTLAEVRD-DLFALFYSQI 315

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIV 330
           N  + V+ +M + P VI  D  +  A++L+ ++ +  + VV  D  + IGI+
Sbjct: 316 NPQIVVDSLMSRPPVVIEGDKTMADAVELMTRYGLKDVPVVAKDSMQCIGII 367


>gi|307272161|ref|ZP_07553421.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|307282354|ref|ZP_07562562.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|312900571|ref|ZP_07759870.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|312904954|ref|ZP_07764092.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|312951984|ref|ZP_07770869.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|306503802|gb|EFM73028.1| SIS domain protein [Enterococcus faecalis TX0860]
 gi|306511050|gb|EFM80060.1| SIS domain protein [Enterococcus faecalis TX0855]
 gi|310630062|gb|EFQ13345.1| SIS domain protein [Enterococcus faecalis TX0102]
 gi|310631710|gb|EFQ14993.1| SIS domain protein [Enterococcus faecalis TX0635]
 gi|311292295|gb|EFQ70851.1| SIS domain protein [Enterococcus faecalis TX0470]
 gi|315026138|gb|EFT38070.1| SIS domain protein [Enterococcus faecalis TX2137]
 gi|315144017|gb|EFT88033.1| SIS domain protein [Enterococcus faecalis TX2141]
 gi|315146753|gb|EFT90769.1| SIS domain protein [Enterococcus faecalis TX4244]
 gi|315150282|gb|EFT94298.1| SIS domain protein [Enterococcus faecalis TX0012]
 gi|315153763|gb|EFT97779.1| SIS domain protein [Enterococcus faecalis TX0031]
 gi|315156911|gb|EFU00928.1| SIS domain protein [Enterococcus faecalis TX0043]
 gi|315158925|gb|EFU02942.1| SIS domain protein [Enterococcus faecalis TX0312]
 gi|315160627|gb|EFU04644.1| SIS domain protein [Enterococcus faecalis TX0645]
 gi|315170548|gb|EFU14565.1| SIS domain protein [Enterococcus faecalis TX1342]
 gi|315579473|gb|EFU91664.1| SIS domain protein [Enterococcus faecalis TX0630]
          Length = 200

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  GHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAIKGRVV 68
           G S +K +  + A ++   E        +++ L    Q         A++ I   +  V 
Sbjct: 5   GFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQAR-HVA 63

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
            TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG ++E+ 
Sbjct: 64  FTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGETNEMI 121

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIG 186
             +   +     +++IT+   S +A  AD  ++  +P E          TT+ I  +A+ 
Sbjct: 122 KQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALI 181

Query: 187 DALA 190
           + LA
Sbjct: 182 ELLA 185


>gi|85715171|ref|ZP_01046155.1| hypothetical protein NB311A_01265 [Nitrobacter sp. Nb-311A]
 gi|85698086|gb|EAQ35959.1| hypothetical protein NB311A_01265 [Nitrobacter sp. Nb-311A]
          Length = 142

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V+    L  A+ ILSE++ G V V+ +  ++ GI++E DI     K         V   M
Sbjct: 17  VEPDVKLSAAVKILSERQIGSVLVLSDT-RIDGILSERDIVHALDKRGAAALDEPVSAAM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +          +   M+++       L VV++  K +G+V   D+++  +
Sbjct: 76  SRKVVSCRLSDTVAHLMEVMTAEKFRHLPVVEE-GKLVGLVSIGDVVKLRV 125


>gi|110636213|ref|YP_676421.1| signal-transduction protein [Mesorhizobium sp. BNC1]
 gi|110287197|gb|ABG65256.1| putative signal-transduction protein with CBS domains
           [Chelativorans sp. BNC1]
          Length = 217

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 18/129 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----- 280
               +  +     +  A  I+  K    + V+D+GQ + G++TEGD+ R           
Sbjct: 7   MSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLRRSELGTPLGDE 66

Query: 281 ------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                        +  V  +M      I ED  L+    LL  H I  L V+ D Q  +G
Sbjct: 67  GAQERARAYVQSRSWKVGALMSSPVLTIGEDAPLSRVAMLLGVHRIKRLPVLRDTQ-LVG 125

Query: 329 IVHFLDLLR 337
           IV   DLL+
Sbjct: 126 IVSRADLLK 134



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 18/55 (32%), Positives = 29/55 (52%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V DVM      I  +  +  A Q++   ++S L V+DD Q  +G++   DLLR
Sbjct: 1   MRVRDVMSTQLVTISPEHSVWHAAQIMLTKHVSGLPVLDDGQVMVGLLTEGDLLR 55


>gi|331681106|ref|ZP_08381743.1| transcriptional regulator [Escherichia coli H299]
 gi|331081327|gb|EGI52488.1| transcriptional regulator [Escherichia coli H299]
          Length = 274

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           L  ++  AR+  + ++A+++  +S +A  +DI L   K       G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAG 232


>gi|255943181|ref|XP_002562359.1| Pc18g05320 [Penicillium chrysogenum Wisconsin 54-1255]
 gi|211587092|emb|CAP94756.1| Pc18g05320 [Penicillium chrysogenum Wisconsin 54-1255]
          Length = 546

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 43/193 (22%), Positives = 71/193 (36%), Gaps = 25/193 (12%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFY-VL 207
           +D+ L  P           P  S+ M       +AI +       +   N S  D   ++
Sbjct: 68  SDVSLDTPVTKRISL--KTPLLSSPMDTVTEHNMAIHMALLGGLGVIHHNCSPEDQAEMV 125

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLK 264
               +    F+             ++     + +   + ++  FG   V + G    KL 
Sbjct: 126 RKVKRYENGFI---------LDPVVISPKATVGEVKELKAKWGFGGFPVTENGTLKSKLV 176

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G++T  DI   FH DLN   V  VM  +       T LT A Q+LRQ     L +VD   
Sbjct: 177 GMVTSRDI--QFHTDLNE-PVTAVMATDLVTAPAGTTLTEANQVLRQSKKGKLPIVDANG 233

Query: 325 KAIGIVHFLDLLR 337
             + ++   DL++
Sbjct: 234 NIVSLLSRSDLMK 246


>gi|312137405|ref|YP_004004742.1| 3-hexulose-6-phosphate isomerase [Methanothermus fervidus DSM 2088]
 gi|311225124|gb|ADP77980.1| 3-hexulose-6-phosphate isomerase [Methanothermus fervidus DSM 2088]
          Length = 194

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 37/188 (19%), Positives = 66/188 (35%), Gaps = 24/188 (12%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  ++++E   + E+       +E+I+    R+ + G G+S  +G   A  L   G    
Sbjct: 13  KNAINAIEKINEKEI----KKMIEEIRNSD-RIFVVGTGRSELVGKAFAMRLMHLGFNVH 67

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V            I   D +I +S SG +  +      +++    +I ITS   S +  
Sbjct: 68  VVGEVTTP-----AIRDKDCLIAISGSGETKTVTIAAETSKKIGACVIGITSTQNSTLWR 122

Query: 155 HADIVLTLPKEP------------ESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFS 200
            ADI + +P +             +     L P  +     A    D +   L+      
Sbjct: 123 IADIKVVIPTKSKKAWKDYTSESLKGEYGDLMPLGTLFEDTAQLFLDGVIAELMTILGKK 182

Query: 201 ENDFYVLH 208
           E D    H
Sbjct: 183 EEDLRKRH 190


>gi|253700551|ref|YP_003021740.1| hypothetical protein GM21_1929 [Geobacter sp. M21]
 gi|251775401|gb|ACT17982.1| CBS domain containing protein [Geobacter sp. M21]
          Length = 875

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +             +  +   C + +A   L       + V+ E   L GII+   + 
Sbjct: 303 RRVDPRRVARDIMSSPVKTISPDCSIEEARERLVRYNVSAMPVISEEGVL-GIISRKTVE 361

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +  + +LN + V D M     V   DT +T     +   +  ++ V+ +    IG++   
Sbjct: 362 KALYHNLNQVPVSDYMHSEFHVASPDTPITEIQSYMVGGDARLVPVISEQG-LIGVITRT 420

Query: 334 DLLRF 338
           DLLR+
Sbjct: 421 DLLRY 425



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  + R            D+M    K I  D  +  A + L ++N+S + V+ +    +G
Sbjct: 298 DAVLRRRVDP---RRVARDIMSSPVKTISPDCSIEEARERLVRYNVSAMPVISEEG-VLG 353

Query: 329 IVHFLDLLRF 338
           I+    + + 
Sbjct: 354 IISRKTVEKA 363


>gi|87199564|ref|YP_496821.1| RpiR family transcriptional regulator [Novosphingobium
           aromaticivorans DSM 12444]
 gi|87135245|gb|ABD25987.1| transcriptional regulator, RpiR family [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 296

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 1/124 (0%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
           G+ +L  SL          AV+ I+A + RV I GIG S  I       L   G  +  V
Sbjct: 119 GIQALRDSLSVLDPKAMAAAVDIIRAAR-RVEIYGIGSSAPIAEDAHYRLLRIGLDARVV 177

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +           +D  ++ +S SGS++E  A    A       I IT+  +S +  +A
Sbjct: 178 IDSHVQAISASRCDKDVAVLTISHSGSTNETVAATRLAHEAGARTIVITNFGRSPIQAYA 237

Query: 157 DIVL 160
           D+VL
Sbjct: 238 DVVL 241


>gi|95929464|ref|ZP_01312207.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
 gi|95134580|gb|EAT16236.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
          Length = 587

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 22/129 (17%), Positives = 48/129 (37%), Gaps = 13/129 (10%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLN 281
           +       +    PL   + +  E  +    VV++  ++ G+++  D+        +   
Sbjct: 457 YMEQDFEQIDERMPLGQLVALAQESSYPHFVVVNDEGRMVGMVSMRDLKACLSEMGELCE 516

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVH----FL-- 333
            +   ++M      I     L  A +L  +  IS L VV   D Q  +G++         
Sbjct: 517 LVVASEIMTHKVITITAQQNLEAAFELFEKKPISTLPVVSTRDGQHVVGVLKKTTLIHAY 576

Query: 334 --DLLRFGI 340
             ++L+ G+
Sbjct: 577 NQNILKIGV 585



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 29/56 (51%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L +L V D M ++ + I E   L   + L ++ +    +VV+D  + +G+V   DL
Sbjct: 449 LRSLLVADYMEQDFEQIDERMPLGQLVALAQESSYPHFVVVNDEGRMVGMVSMRDL 504


>gi|237801767|ref|ZP_04590228.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|237806705|ref|ZP_04593409.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331024626|gb|EGI04682.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           oryzae str. 1_6]
 gi|331027819|gb|EGI07874.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           oryzae str. 1_6]
          Length = 288

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|113867333|ref|YP_725822.1| hypothetical protein H16_A1314 [Ralstonia eutropha H16]
 gi|113526109|emb|CAJ92454.1| conserved hypothetical protein with CBS domain [Ralstonia eutropha
           H16]
          Length = 148

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/119 (20%), Positives = 54/119 (45%), Gaps = 5/119 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           +   G+++  V     L+ A+  ++E   G + VV E   L G++T  +I     ++   
Sbjct: 7   LQIKGNTLYTVTPDTSLLVAVHTMAEHDIGSL-VVMEYGDLVGMLTFREIIETLARNHGN 65

Query: 283 ---LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               S+  VM   P     +T +    +++ + +   L V+D+ +  +G++ F D+ + 
Sbjct: 66  VGGTSIRKVMDDAPLTCTMETDVNEVRRMMLERHTRYLPVLDN-RTLMGVISFYDVAKA 123


>gi|14591537|ref|NP_143619.1| hypothetical protein PH1780 [Pyrococcus horikoshii OT3]
 gi|3258215|dbj|BAA30898.1| 285aa long hypothetical protein [Pyrococcus horikoshii OT3]
          Length = 285

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 49/166 (29%), Gaps = 39/166 (23%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        +                + +V  G PL  A+  L       + VVD    L
Sbjct: 120 FAKSEKYKGVEIEPYY-------QRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNL 172

Query: 264 KGIITEGDIFR--------------------------------NFHKDLNTLSVEDVMIK 291
            GI+ E D+ R                                 F   L    V ++M +
Sbjct: 173 VGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTR 232

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  V      +      + +++I  L V+      IG++   DLL+
Sbjct: 233 DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLK 278



 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 54/121 (44%), Gaps = 4/121 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            +          +   + +      A+ +  + +     VV++  KL GII+   I  N 
Sbjct: 1   MIWVRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNP 60

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            ++   + V+    ++  V+ E+  L  A +L+ +++   ++VVD   K +GI+   D++
Sbjct: 61  DEEQLAMLVK----RDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDII 116

Query: 337 R 337
           R
Sbjct: 117 R 117



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
              +P+VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    +
Sbjct: 70  KRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGV 129

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +E    +   ++ E T L  A++ L   N   L VVD     +GIV   DLLR
Sbjct: 130 EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 183


>gi|330469045|ref|YP_004406788.1| RpiR family transcriptional regulator [Verrucosispora maris
           AB-18-032]
 gi|328812016|gb|AEB46188.1| transcriptional regulator, rpir family protein [Verrucosispora
           maris AB-18-032]
          Length = 319

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 73/185 (39%), Gaps = 7/185 (3%)

Query: 15  GHSLMKNSTVQCALRSII-AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIG 73
           G  +  +  ++  L  II A+ R +    + L      +   A   I     RV I G  
Sbjct: 116 GREIQPSDPLERVLEQIIVADTRAMHDTAALLD---LGEVERAAVAIAGAS-RVNIFGAS 171

Query: 74  KSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYY 133
            S  +G ++  +L   G  ++  +   +      ++   D+ + +S SG + E   +L  
Sbjct: 172 GSALVGEEMQFSLHRIGVAAWAWNDVHSGLAAAALLRPGDVALGISHSGQTREAIEMLAE 231

Query: 134 ARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
                   +A+T   +S +A  ADIVL      ++        ++   QL + D L IA+
Sbjct: 232 GGSRGATTVALTGFRRSPLAELADIVLLT--ASQATTFRPDALSARHPQLVVLDLLYIAV 289

Query: 194 LESRN 198
            +  +
Sbjct: 290 AQRTH 294


>gi|290559654|gb|EFD92981.1| CBS domain containing protein [Candidatus Parvarchaeum acidophilus
           ARMAN-5]
          Length = 361

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V     +   I I+ +   G + V+DE QK+ GI+++ DI +    D   ++  V+D+ I
Sbjct: 73  VMPRDDISKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILKVLINDRVFDSFKVDDIAI 132

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           K   ++  D  L  A +L   + I  L +VD+  K I
Sbjct: 133 KKFPILRTDDTLGRAQKLASINKIDNLPIVDNFGKLI 169



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
               +  V +  P+  A+ I+  K+   + VV + +K  G++    I     K++N+ S 
Sbjct: 7   MTKKVVTVDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMVPYYYI---LTKEINSKSK 62

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M K P V+  D  ++  + +++   I  L V+D+ QK +GIV   D+L+
Sbjct: 63  VNEFMQKTPGVMPRDD-ISKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILK 114



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +M K    +  D  +  A++++    I  L VV   +K +G+V
Sbjct: 4   AKIMTKKVVTVDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMV 47



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVH---FLDLL 336
           A++ +  + I   +VVD   K +GI+     LDLL
Sbjct: 227 AIEFMLSYKIKSGIVVDSNNKPVGILSRLKILDLL 261


>gi|290558906|gb|EFD92295.1| inosine-5 -monophosphate dehydrogenase [Candidatus Parvarchaeum
           acidophilus ARMAN-5]
          Length = 361

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/97 (28%), Positives = 48/97 (49%), Gaps = 2/97 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMI 290
           V     +   I I+ +   G + V+DE QK+ GI+++ DI +    D   ++  V+D+ I
Sbjct: 73  VMPRDDISKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILKVLINDRVFDSFKVDDIAI 132

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           K   ++  D  L  A +L   + I  L +VD+  K I
Sbjct: 133 KKFPILRTDDTLGRAQKLASINKIDNLPIVDNFGKLI 169



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 6/113 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS- 284
               +  V +  P+  A+ I+  K+   + VV + +K  G++    I     K++N+ S 
Sbjct: 7   MTKKVVTVDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMVPYYYI---LTKEINSKSK 62

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V + M K P V+  D  ++  + +++   I  L V+D+ QK +GIV   D+L+
Sbjct: 63  VNEFMQKTPGVMPRDD-ISKTIDIMQDSGIGALPVLDEDQKVVGIVSDFDILK 114



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
             +M K    +  D  +  A++++    I  L VV   +K +G+V
Sbjct: 4   AKIMTKKVVTVDVDMPIEKALEIMESKKIKELPVV-KNKKYVGMV 47



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 3/35 (8%)

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVH---FLDLL 336
           A++ +  + I   +VVD   K +GI+     LDLL
Sbjct: 227 AIEFMLSYKIKSGIVVDSNNKPVGILSRLKILDLL 261


>gi|118587290|ref|ZP_01544717.1| transctiptional regulator, GntR family [Oenococcus oeni ATCC
           BAA-1163]
 gi|290891098|ref|ZP_06554160.1| hypothetical protein AWRIB429_1550 [Oenococcus oeni AWRIB429]
 gi|118432279|gb|EAV39018.1| transctiptional regulator, GntR family [Oenococcus oeni ATCC
           BAA-1163]
 gi|290479062|gb|EFD87724.1| hypothetical protein AWRIB429_1550 [Oenococcus oeni AWRIB429]
          Length = 282

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/147 (21%), Positives = 55/147 (37%), Gaps = 3/147 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
                V+ + +   ++   GIG S  +          T          +        +T 
Sbjct: 118 DLDRVVDWLVSS-NKIGFFGIGGSSIVAFNAYHKFLRTNLNIVSHPDYDIQIMQAAHLTS 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL IV+S SG + +   +    R     ++AIT+  +S +A +ADIVL    E      
Sbjct: 177 EDLGIVISHSGRNQDTLLVENKLRENGSKIVAITAFPESPIAKNADIVLNSYSEE--VNF 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLESRN 198
                +S + Q+ I D L   +    N
Sbjct: 235 RQESMSSLVAQITIIDTLFTLVGHRLN 261


>gi|300311520|ref|YP_003775612.1| inosine-5'-monophosphate dehydrogenase [Herbaspirillum seropedicae
           SmR1]
 gi|300074305|gb|ADJ63704.1| inosine-5'-monophosphate dehydrogenase protein [Herbaspirillum
           seropedicae SmR1]
          Length = 489

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 36/168 (21%), Positives = 60/168 (35%), Gaps = 10/168 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SA M       LAIA+ +           L P  +   +                
Sbjct: 40  NIPLVSAAMDTVTEARLAIAMAQEGGIGIIH-KNLTPKEQAREVSKVKRFESGVVRDPIT 98

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     + D I +  +       VV EG+ L GIIT  D+   F ++L    V   M   
Sbjct: 99  IPPTMKIRDVIALSKQHGISGFPVV-EGKALVGIITNRDLR--FEEEL-DAEVRAKMTPR 154

Query: 293 --PKVILEDTLLT---VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                + E+        A +L+ +H +  +MVV+D  +  G++   D+
Sbjct: 155 EKLVYVKENGSSADPEEAKRLMNKHRLERVMVVNDAFELRGLITVKDI 202


>gi|238761988|ref|ZP_04622961.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
 gi|238699716|gb|EEP92460.1| Transcriptional regulator, RpiR family [Yersinia kristensenii ATCC
           33638]
          Length = 246

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/129 (22%), Positives = 57/129 (44%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E          +I A + R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDTVATQIAATR-RIIFVGIGTSGALGKYSARFFSNIGKYSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+ S SG ++E+  I       +  +I++T+ + S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIIFSVSGETEEIIRIANQFSLQNCKIISLTNSDNSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|331654503|ref|ZP_08355503.1| transcriptional regulator [Escherichia coli M718]
 gi|323969124|gb|EGB64428.1| SIS domain-containing protein [Escherichia coli TA007]
 gi|331047885|gb|EGI19962.1| transcriptional regulator [Escherichia coli M718]
          Length = 274

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 50/106 (47%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  +G  L   L   G P+        +  +   ++++  ++ +S SGS+ +
Sbjct: 127 VQIYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNATTLSKNTFVVAISSSGSTRD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           L  ++  AR+  + ++A+++  +S +A  +DI L   K       G
Sbjct: 187 LLHVVKLARKQGVRVLALSNTPRSPLASLSDIQLVAAKPEGPLSAG 232


>gi|255077916|ref|XP_002502538.1| predicted protein [Micromonas sp. RCC299]
 gi|226517803|gb|ACO63796.1| predicted protein [Micromonas sp. RCC299]
          Length = 206

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/102 (27%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 236 GCPLIDAIT--ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
           G PL DAI    +   + G            G+++  D+ R   K L   +VEDVM   P
Sbjct: 97  GLPLEDAIVATTMERYQTGACC---------GVLSRTDLDRV--KSLGGYTVEDVMSSPP 145

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +   +   +     ++ +H I  + VV+D    IGIV   D+
Sbjct: 146 RTCKQRATVASVAGMMLKHKIHRIPVVNDRDVPIGIVTRTDI 187


>gi|328912725|gb|AEB64321.1| hypothetical protein LL3_02789 [Bacillus amyloliquefaciens LL3]
          Length = 238

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 11/174 (6%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS FK   +      K +T++ +  S+          E ++ G++  +   A   +   +
Sbjct: 59  FSEFKVKLKMYAEADKKTTLKSSHHSVT------EFFERTVSGDMEEKLKEAAALVADAE 112

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HGDLGMITRDDLIIVLSWSGS 123
             V+  G+G SG +    A   +  G  S ++       H        + + I LS SG 
Sbjct: 113 N-VIFIGVGSSGILAEYGARYFSCLGKLSMYIKDPYFPVHSHF---RHNSITIALSVSGE 168

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
                  L   ++    +I+IT+   S +A  +D+ L+     E   +    T 
Sbjct: 169 GHSTVTHLNQLKQEGSRVISITNHKHSTIAKMSDVNLSYYVTEEWVENAKITTQ 222


>gi|313899074|ref|ZP_07832601.1| SIS domain protein [Clostridium sp. HGF2]
 gi|312956273|gb|EFR37914.1| SIS domain protein [Clostridium sp. HGF2]
          Length = 271

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 33/140 (23%), Positives = 57/140 (40%), Gaps = 3/140 (2%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI 109
             + + A++ I+  +  +   GIG SG   S   S L   G  +  V  +        + 
Sbjct: 104 QEEINHAIQLIEEAE-YIYFFGIGTSGFAASMGESRLFRFGKQTKAVTDSHRQLMQASLC 162

Query: 110 TRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESC 169
              +LII++S SG + +L      A +    +I IT+   S +A  +D V+      +  
Sbjct: 163 NEKNLIIIVSVSGETKDLIEAAEVAIKTGCKIITITNHITSTLAKLSDCVII--SYGKVN 220

Query: 170 PHGLAPTTSAIMQLAIGDAL 189
                  +S + QL I D L
Sbjct: 221 LMNAGTFSSMVSQLFILDIL 240


>gi|291244483|ref|XP_002742128.1| PREDICTED: hCG2002013-like [Saccoglossus kowalevskii]
          Length = 527

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 31/171 (18%), Positives = 56/171 (32%), Gaps = 9/171 (5%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M       +AIAL           +                          L
Sbjct: 76  RTPCVSSPMDTVTEADMAIALALQGGIGI--IHHNCTPEFQANEVRKVKKYEQGFIMDAL 133

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V      + +     S+  F  + + D G    +L GI+T  DI      + N   +E  
Sbjct: 134 VMSANTTIKEVFAAKSQHGFSGIPITDNGKLGGRLLGIVTARDI-DFVEPEFNDKPLEQF 192

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M K  +  V   +  L  A  +L++     L +V++  + + ++   DL +
Sbjct: 193 MTKREDLVVAPANVTLKEANDILQKSKKGKLPIVNENDELVSLISRTDLKK 243


>gi|239905548|ref|YP_002952287.1| putative acetoin utilization protein [Desulfovibrio magneticus
           RS-1]
 gi|239795412|dbj|BAH74401.1| putative acetoin utilization protein [Desulfovibrio magneticus
           RS-1]
          Length = 219

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 15/127 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------ 278
                   V    P++DA  +L+   F  + VVD+ +KL G + + DI            
Sbjct: 6   KMLKDFKKVTPQTPVLDADKLLTGSDFWMLLVVDDDRKLLGYVRKEDIALALPSIMTTLE 65

Query: 279 ------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH- 331
                  L+ L+V+ +M K+   +  +  +  A +++ Q N++ L VV D QK +G +  
Sbjct: 66  KHEALYLLSKLTVQKIMRKDIIAVHPEMEIEQAAEIMHQKNLAGLAVVGDQQKLVGYITR 125

Query: 332 --FLDLL 336
              LD+L
Sbjct: 126 SVMLDVL 132


>gi|227510612|ref|ZP_03940661.1| D-fructose-6-phosphate amidotransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
 gi|227190264|gb|EEI70331.1| D-fructose-6-phosphate amidotransferase [Lactobacillus brevis
           subsp. gravesensis ATCC 27305]
          Length = 605

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 59/264 (22%), Positives = 104/264 (39%), Gaps = 39/264 (14%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTP 92
           R L++L +   G+ +      ++ +     R+ I G G S   G +G KL   LA    P
Sbjct: 267 RKLAALYTQESGKPNID-DNLIDALNDAD-RIYIVGAGTSYHAGLVGKKLFEKLAH--VP 322

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           +    A+E ++ D  ++++    I LS SG + + + +L          + IT+   S +
Sbjct: 323 TEVHIASEFAYDD-PLLSKKPFFIFLSQSGETADSREVLVNVNAHDYKSLTITNVENSTL 381

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS-ENDFYVLHPGG 211
              A   + L   PE     +A T +   Q+A+   LA AL E++  +   DF +    G
Sbjct: 382 FREATYTMLLHAGPE---ISVASTKAYTAQIAVEAILAKALGETKEQTIAEDFDIRQQLG 438

Query: 212 KLGTLFVCA---SDVMHSGDSIPLVKI------------GCPLIDA--ITILS------- 247
            + T         D++        V                 L  A  +  +S       
Sbjct: 439 LVATGMQAIIDEKDIIEDLAKKYFVPAPRAFYIGRGIDQTVSLEAALKLKEISYVQAEGF 498

Query: 248 ---EKRFGCVAVVDEGQKLKGIIT 268
              E + G +A+++EG  + GIIT
Sbjct: 499 ASGELKHGTIALIEEGTPVVGIIT 522


>gi|330444513|ref|YP_004377499.1| magnesium transporter [Chlamydophila pecorum E58]
 gi|328807623|gb|AEB41796.1| magnesium transporter [Chlamydophila pecorum E58]
          Length = 470

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 156 METTVRDVSACIRNNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEVSLKQIMN 211

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L DT     + L+ ++ IS L VVD+    IG++ + D++  
Sbjct: 212 QVEHKVLPDTTRDEVVDLVERYKISALPVVDEENFLIGVITYEDVVEA 259



 Score = 44.1 bits (103), Expect = 0.029,   Method: Composition-based stats.
 Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 1/70 (1%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S           V       + + ++   +   + VVDE   L G+IT  D+      D
Sbjct: 204 VSLKQIMNQVEHKVLPDTTRDEVVDLVERYKISALPVVDEENFLIGVITYEDVVEAIE-D 262

Query: 280 LNTLSVEDVM 289
           +   ++  + 
Sbjct: 263 IADETIARMA 272


>gi|209544652|ref|YP_002276881.1| CBS domain-containing membrane protein [Gluconacetobacter
           diazotrophicus PAl 5]
 gi|209532329|gb|ACI52266.1| CBS domain containing membrane protein [Gluconacetobacter
           diazotrophicus PAl 5]
          Length = 235

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 25/130 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------ 280
           V    PL  A+ ++ E     V V+  G  + G++TEGD+ R    D             
Sbjct: 14  VAPTDPLEKAVGLMLEHGISGVPVLGVGGHVVGVLTEGDLLRRSELDTEPGRSWLGDWLR 73

Query: 281 ------------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                       ++  V D+M  +P  I  D  L  A+ ++  H +  L V+    + +G
Sbjct: 74  SPGRAASDYVRTHSHRVIDLMSDSPVTIAPDATLREAVDMMLAHRVKRLPVI-QDGRMVG 132

Query: 329 IVHFLDLLRF 338
           I+   DLLR 
Sbjct: 133 ILSRADLLRA 142



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 19/85 (22%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           + T      D+M   DS   +     L +A+ ++   R   + V+ +  ++ GI++  D+
Sbjct: 83  VRTHSHRVIDLM--SDSPVTIAPDATLREAVDMMLAHRVKRLPVI-QDGRMVGILSRADL 139

Query: 273 FRNFHKDLN--TLSVEDVMIKNPKV 295
            R   +  +  T +V DV I+N   
Sbjct: 140 LRALMRAASGPTETVSDVQIQNEIT 164


>gi|269216059|ref|ZP_06159913.1| lincomycin resistance protein LmrB [Slackia exigua ATCC 700122]
 gi|269130318|gb|EEZ61396.1| lincomycin resistance protein LmrB [Slackia exigua ATCC 700122]
          Length = 656

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/195 (14%), Positives = 71/195 (36%), Gaps = 32/195 (16%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSEND-FYVLHPGGKLGTL---FVCASDVMHSGD 228
           +A    + + + +   + + + +++  + +  F    P   L +        SDVM    
Sbjct: 451 MAFIGVSALMVVVFLIILLLVKDAKGEAPSAAFSDEAPVADLRSKPALEWVVSDVM--DR 508

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--------- 279
           +   V     + DA+ I ++     + V D    + G I++GD+ +    +         
Sbjct: 509 ACANVPEDGTVGDALAIFAQSGTSGLPVTDGAGAVVGFISDGDVMKYLGSEDFTFSDGST 568

Query: 280 ----------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                           + +L+V ++  K    +     L  A ++L +  I  L V+   
Sbjct: 569 VFRVGEDRTFQDRLDAMRSLNVMEIATKRVIAVDAGMALEDACKILAERRIKKLPVI-SA 627

Query: 324 QKAIGIVHFLDLLRF 338
            + +G +   +++R 
Sbjct: 628 GRFVGSISRRNVVRA 642


>gi|299822922|ref|ZP_07054808.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
 gi|299816451|gb|EFI83689.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Listeria grayi DSM 20601]
          Length = 389

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L  AI I+ +KR   + VVD+   LKG I   D+    +      SV D+M ++
Sbjct: 262 ITADKSLQAAIQIMKDKRVDTLLVVDDRHNLKGFI---DVEAINNNRRTATSVIDIMERD 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + EDTL+   +Q + +     + VVD+ +K +GIV 
Sbjct: 319 VFSVTEDTLVRDTIQRILKRGYKYVPVVDNEKKLVGIVT 357



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 24/57 (42%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   V  +M  N   I  D  L  A+Q+++   +  L+VVDD     G +
Sbjct: 240 RLIEARPDVTQVGQIMNPNAISITADKSLQAAIQIMKDKRVDTLLVVDDRHNLKGFI 296


>gi|157151330|ref|YP_001449449.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus gordonii str. Challis substr. CH1]
 gi|157076124|gb|ABV10807.1| phosphosugar-binding transcriptional regulator, RpiR family
           [Streptococcus gordonii str. Challis substr. CH1]
          Length = 284

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/220 (15%), Positives = 69/220 (31%), Gaps = 8/220 (3%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           +   ++  T        +     + R +    +     E  +  +   +       I+  
Sbjct: 70  FKFQYQQQTTSSEPEAPSLGHDLSRRVLRNYTQLRMQTEEVIDED---KLQRIATLIEDA 126

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
             RV   GIG SG +   +       G     +   +       ++ ++ L+I  S SG 
Sbjct: 127 D-RVYFFGIGSSGLVARDMKLRFMRLGVVCEALTDQDGFAWTTSILDKNCLVIGFSLSGQ 185

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           +  +   L  A+      + +T + + V     D    L    +S P  +   ++    L
Sbjct: 186 TQSIIDSLIDAKNMGAKTVLVTGQPQKV---QKDFTEILAVALQSKPEFILRISAQFPML 242

Query: 184 AIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
            + D + A  L  +R   E  F       KL       + 
Sbjct: 243 LMIDLIYAFFLEINREKKEKIFNSFWENQKLNGYHRRNTH 282


>gi|332992644|gb|AEF02699.1| DNA-binding transcriptional regulator HexR [Alteromonas sp. SN2]
          Length = 283

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 32/161 (19%), Positives = 62/161 (38%), Gaps = 4/161 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++SLE + Q       +  V+ +   + ++   G+G S  +     +       P  +  
Sbjct: 103 MASLEVARQSVDVQVVNRVVDLLTQAQ-KISFFGLGASASVAHDALNKFFRFNVPVVYFE 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                       +  D+++++S +G +  L  I   AR     ++ ITS   S ++    
Sbjct: 162 DILMQRMSCMNCSTGDVVVLISHTGRTKSLVEIAQIARMNDATVVGITS-ADSPLSHECT 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            VL+L    ++  +   P  S I QL + D LA      R 
Sbjct: 221 YVLSLEVPEDTDMY--MPMASRIAQLTLIDVLATGFTLRRG 259


>gi|229496379|ref|ZP_04390096.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Porphyromonas endodontalis ATCC 35406]
 gi|229316698|gb|EEN82614.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Porphyromonas endodontalis ATCC 35406]
          Length = 616

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 34/136 (25%), Positives = 59/136 (43%), Gaps = 9/136 (6%)

Query: 66  RVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R++I G G S H   IG +L  +LA    P    +++E       +I   D++I +S SG
Sbjct: 302 RIIIVGCGTSWHAGLIGKQLIESLAR--IPVEVEYSSE-FRYRNPIIRPSDVVIAMSQSG 358

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +  A +  A+     +  I +   S +A   D    +   PE    G+A T +   Q
Sbjct: 359 ETADTLAAIQLAKEKGAFIYGICNSVGSSIARATDSGTYIHVGPE---IGVASTKAFTGQ 415

Query: 183 LAIGDALAIALLESRN 198
           + +   LA+ L   + 
Sbjct: 416 VTVLALLALCLGREKG 431


>gi|294814106|ref|ZP_06772749.1| RpiR-family transcriptional regulator [Streptomyces clavuligerus
           ATCC 27064]
 gi|326442508|ref|ZP_08217242.1| RpiR family transcriptional regulator [Streptomyces clavuligerus
           ATCC 27064]
 gi|294326705|gb|EFG08348.1| RpiR-family transcriptional regulator [Streptomyces clavuligerus
           ATCC 27064]
          Length = 276

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 35/131 (26%), Positives = 54/131 (41%), Gaps = 1/131 (0%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+ I G+G S  +G  LA  L   G  +        +  +   +   D+ + ++ SGS+ 
Sbjct: 121 RIDIYGVGASSLVGLDLAQKLLRIGLIAHAHTDPHLAVTNAVQLRTGDVAVAITHSGSTG 180

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           ++   L  A       IAIT      V  +AD VLT     ES     A  +S   QL +
Sbjct: 181 DVIEPLRAAFERGATTIAITGRADGPVTQYADHVLTTSTSRESE-LRPAAMSSRTGQLLV 239

Query: 186 GDALAIALLES 196
            D L I + + 
Sbjct: 240 VDCLFIGVAQR 250


>gi|118443077|ref|YP_877370.1| hypothetical protein NT01CX_1287 [Clostridium novyi NT]
 gi|118133533|gb|ABK60577.1| CBS domain containing protein [Clostridium novyi NT]
          Length = 431

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  VK    + +   I+ + +     VVD  + + GIIT  D+     K  +   V
Sbjct: 194 MITDPIYVKFDDTIENFKNIIEKNKHQRYPVVDNNKNVVGIITIKDL----QKQNDNKLV 249

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++M K    + E T +  A  ++    I +  VV   ++ IG+V   D+L+ 
Sbjct: 250 KEIMSKELITVTEKTTVAYAAHIMGWEGIELCPVV-QGRQLIGVVSTEDILKA 301



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 13/53 (24%), Positives = 27/53 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +ED+MI +P  +  D  +     ++ ++      VVD+ +  +GI+   DL +
Sbjct: 190 IEDIMITDPIYVKFDDTIENFKNIIEKNKHQRYPVVDNNKNVVGIITIKDLQK 242


>gi|268325811|emb|CBH39399.1| conserved hypothetical protein, containing CBS domain pair
           [uncultured archaeon]
 gi|268326298|emb|CBH39886.1| conserved hypothetical protein, containing CBS domain pair
           [uncultured archaeon]
          Length = 137

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 20/105 (19%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDL--NTLSVEDVMIK 291
               +      +     G + +  +  K  GI+T+ DI  +   +D   + +  +++M  
Sbjct: 21  EETSVTSLSKEMEISGLGSIVIT-KSGKPVGIVTDRDIAIKVIMRDRKGSEIKAKEIMSS 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I    LL  A  +L +++I  L V+ +  +  GI+   ++L
Sbjct: 80  PLVTIEPGVLLEKACAILAENDIRRLPVI-EDGELRGIISVRNVL 123



 Score = 39.1 bits (90), Expect = 0.95,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 5/55 (9%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL--MVVDDCQKAIGIVHFLDL 335
           L V DVM        E+T +T   + +    IS L  +V+    K +GIV   D+
Sbjct: 6   LEVGDVMTPKVLTADEETSVTSLSKEME---ISGLGSIVITKSGKPVGIVTDRDI 57


>gi|52081071|ref|YP_079862.1| putative transcriptional repressor CcpN [Bacillus licheniformis
           ATCC 14580]
 gi|319644970|ref|ZP_07999203.1| YqzB protein [Bacillus sp. BT1B_CT2]
 gi|52004282|gb|AAU24224.1| putative transcriptional repressor CcpN [Bacillus licheniformis
           ATCC 14580]
 gi|317392779|gb|EFV73573.1| YqzB protein [Bacillus sp. BT1B_CT2]
          Length = 230

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 29/142 (20%), Positives = 59/142 (41%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        ++     + DAI  +  +  G + VVD+   L
Sbjct: 79  FYTGKTGTQLLADKLKKLQVKDFQSIPVVIHENVSVYDAICTMFLEDVGTLFVVDDNAIL 138

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P +     D  +    ++L +  I  L V
Sbjct: 139 VGVLSRKDLLRASIGKQELPSIPVHIIMTRMPNITLCRRDDFILDIAKMLIEKQIDALPV 198

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V D +K    +G +   ++ + 
Sbjct: 199 VKDTEKGYEVVGRITKTNMTKI 220



 Score = 46.4 bits (109), Expect = 0.007,   Method: Composition-based stats.
 Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L  L V+D     P VI E+  +  A+  +   ++  L VVDD    +G++   DL
Sbjct: 89  LADKLKKLQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDDNAILVGVLSRKDL 147

Query: 336 LRFGI 340
           LR  I
Sbjct: 148 LRASI 152


>gi|15605911|ref|NP_213288.1| poly A polymerase [Aquifex aeolicus VF5]
 gi|2983086|gb|AAC06692.1| poly A polymerase [Aquifex aeolicus VF5]
          Length = 824

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 54/141 (38%), Gaps = 3/141 (2%)

Query: 198 NFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV 257
           N S      L                + +     L +    + DA+T LSE+      V+
Sbjct: 278 NVSAERIKELIKAFLKRKYVKLKVRDIMNTPPFVL-EEHVSVKDALTELSERGIANAPVI 336

Query: 258 DEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           +   KL GII++        K      +E  + ++   +  D  +  A ++L +    ++
Sbjct: 337 NREGKLVGIISKK-ALLKLVKLYPDEPIELFVNRDFYTLSPDAPVWEAEEILTKFGQKLI 395

Query: 318 MVVDDCQKAIGIVHFLDLLRF 338
            VV +    +G+V  LD+L+ 
Sbjct: 396 PVV-EDGTVVGVVTRLDILQA 415



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 25/58 (43%), Gaps = 1/58 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
                 +    P+ +A  IL++     + VV E   + G++T  DI +   +DL  L 
Sbjct: 368 NRDFYTLSPDAPVWEAEEILTKFGQKLIPVV-EDGTVVGVVTRLDILQAVKEDLEKLK 424


>gi|226314142|ref|YP_002774038.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
 gi|226097092|dbj|BAH45534.1| transcriptional regulator [Brevibacillus brevis NBRC 100599]
          Length = 297

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 28/146 (19%), Positives = 50/146 (34%), Gaps = 3/146 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            Q    V+ ++     +   G+G S         T    G      + +         + 
Sbjct: 134 EQLERCVDLLQKANT-IHFYGVGTSAVTAQDAKYTFLRIGLRVDAFNESHLQAMAAATLG 192

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ I LS SGS+ +    L  A++     I +T   +S +   ADI L    +     
Sbjct: 193 PGDVAIGLSVSGSTKDTIDSLKVAKQAGAACICLTHYRRSPITNVADITLLTAAQEGPLQ 252

Query: 171 HGLAPTTSAIMQLAIGDALAIALLES 196
            G     + I QL + D ++  +   
Sbjct: 253 GGSL--AAKIAQLHVLDVISTTITMR 276


>gi|254513226|ref|ZP_05125291.1| bifunctional protein glk [Rhodobacteraceae bacterium KLH11]
 gi|221532230|gb|EEE35226.1| bifunctional protein glk [Rhodobacteraceae bacterium KLH11]
          Length = 320

 Score = 66.1 bits (160), Expect = 7e-09,   Method: Composition-based stats.
 Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 7/165 (4%)

Query: 36  RGLSSLESSLQ-GELSFQFHCAVEKIKAIKGR--VVITGIGK-SGHIGSKLASTLASTGT 91
           + L +L ++L             E   A   R  ++  GIG  S  +  + ++     G 
Sbjct: 129 QVLGALFATLDVMRGQIDTERLEEARDACLDRRQILFAGIGGGSSLVAQEASNRFFRLGI 188

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
           PSFFV+ +         +  +D++ ++S SG +D + +    A  +    I+IT +  + 
Sbjct: 189 PSFFVNDSYVLQMRAAALGLEDVLFLVSASGEADAIVSAAEVANGYGATTISIT-KPNTR 247

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++  + I L      +S  +   PT S    LAI DALA+ + + 
Sbjct: 248 LSDISKIALLTELPEDSDIYK--PTASRYAHLAIVDALAMTVAQE 290


>gi|237739641|ref|ZP_04570122.1| CBS domain-containing protein [Fusobacterium sp. 2_1_31]
 gi|229423249|gb|EEO38296.1| CBS domain-containing protein [Fusobacterium sp. 2_1_31]
          Length = 199

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + +   + DAI  L     G + VV E +KL GII+  
Sbjct: 56  GYSYNNKCTIIRVKDCMSPQNSIDVKTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 114

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P ++   ED  +  A++ L +H I  L V+  +  K
Sbjct: 115 DLLKATLNKKNIEKTPVSMIMTRMPNIVHCFEDDNIMDAIEKLIKHEIDSLPVLRKENGK 174

Query: 326 A 326
            
Sbjct: 175 L 175



 Score = 36.4 bits (83), Expect = 6.4,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      I   T +  A+  L  +++  L+VV++  K +GI+   DLL+ 
Sbjct: 68  VKDCMSPQN-SIDVKTSVYDAIIHLFNYDLGTLVVVENE-KLVGIISRKDLLKA 119


>gi|193213558|ref|YP_001999511.1| putative signal-transduction protein with CBS domains
           [Chlorobaculum parvum NCIB 8327]
 gi|193087035|gb|ACF12311.1| putative signal-transduction protein with CBS domains
           [Chlorobaculum parvum NCIB 8327]
          Length = 148

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 52/121 (42%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDIFRNF-------H 277
                  +K    + +A+ ++ +     + V+   +    GI+TE DI           H
Sbjct: 16  MQKDFHTIKGSSTVAEALQLMKKTGESGLIVLPRNEDDCYGIVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    +     +  A++L+++ N+  L ++D+  K IG+++  D+L 
Sbjct: 76  RDPWNTPVFQIMSKPIISVNPSMRIKYALRLMKRTNVRRLTIMDN-NKVIGVLNMADVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135



 Score = 38.0 bits (87), Expect = 1.9,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L TL V  +M K+   I   + +  A+QL+++   S L+V+  +     GIV   D+L
Sbjct: 7   LRTLPVSALMQKDFHTIKGSSTVAEALQLMKKTGESGLIVLPRNEDDCYGIVTEKDIL 64


>gi|320143232|gb|EFW35022.1| magnesium transporter [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 459

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 144 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 195

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 196 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 251

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 252 ITIDDIL 258



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 139 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 198

Query: 336 L 336
           +
Sbjct: 199 I 199


>gi|262066679|ref|ZP_06026291.1| CBS domain protein [Fusobacterium periodonticum ATCC 33693]
 gi|291379638|gb|EFE87156.1| CBS domain protein [Fusobacterium periodonticum ATCC 33693]
          Length = 199

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + +   + DAI  L     G + VV E +KL GII+  
Sbjct: 56  GYSYNEKCTIIRVKDCMSPQNSIDVKTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 114

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P ++   ED  +  A++ L +H I  L V+  +  K
Sbjct: 115 DLLKATLNKKNIEKTPVSMIMTRMPNIVHCFEDDNIMDAIEKLIKHEIDSLPVLRKENGK 174

Query: 326 A 326
            
Sbjct: 175 L 175



 Score = 36.4 bits (83), Expect = 6.1,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+D M      I   T +  A+  L  +++  L+VV++  K +GI+   DLL+ 
Sbjct: 68  VKDCMSPQN-SIDVKTSVYDAIIHLFNYDLGTLVVVENE-KLVGIISRKDLLKA 119


>gi|227519359|ref|ZP_03949408.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|293384225|ref|ZP_06630114.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis R712]
 gi|293387108|ref|ZP_06631672.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis S613]
 gi|307275264|ref|ZP_07556409.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|307288722|ref|ZP_07568701.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|312906342|ref|ZP_07765352.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|312909688|ref|ZP_07768541.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|227073185|gb|EEI11148.1| RpiR family transcriptional regulator [Enterococcus faecalis
           TX0104]
 gi|291078434|gb|EFE15798.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis R712]
 gi|291083463|gb|EFE20426.1| putative phosphosugar-binding transcriptional regulator
           [Enterococcus faecalis S613]
 gi|306500335|gb|EFM69673.1| SIS domain protein [Enterococcus faecalis TX0109]
 gi|306508044|gb|EFM77169.1| SIS domain protein [Enterococcus faecalis TX2134]
 gi|310627618|gb|EFQ10901.1| SIS domain protein [Enterococcus faecalis DAPTO 512]
 gi|311289989|gb|EFQ68545.1| SIS domain protein [Enterococcus faecalis DAPTO 516]
 gi|315166067|gb|EFU10084.1| SIS domain protein [Enterococcus faecalis TX1302]
 gi|315167857|gb|EFU11874.1| SIS domain protein [Enterococcus faecalis TX1341]
 gi|315172585|gb|EFU16602.1| SIS domain protein [Enterococcus faecalis TX1346]
 gi|315574769|gb|EFU86960.1| SIS domain protein [Enterococcus faecalis TX0309B]
 gi|315582159|gb|EFU94350.1| SIS domain protein [Enterococcus faecalis TX0309A]
          Length = 200

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  GHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAIKGRVV 68
           G S +K +  + A ++   E        +++ L    Q         A++ I   +  V 
Sbjct: 5   GFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQAR-HVA 63

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
            TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG ++E+ 
Sbjct: 64  FTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGETNEMI 121

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIG 186
             +   +     +++IT+   S +A  AD  ++  +P E          TT+ I  +A+ 
Sbjct: 122 KQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALI 181

Query: 187 DALA 190
           + LA
Sbjct: 182 ELLA 185


>gi|225390222|ref|ZP_03759946.1| hypothetical protein CLOSTASPAR_03972 [Clostridium asparagiforme
           DSM 15981]
 gi|225043733|gb|EEG53979.1| hypothetical protein CLOSTASPAR_03972 [Clostridium asparagiforme
           DSM 15981]
          Length = 169

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 46/130 (35%), Gaps = 2/130 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
            + + GIG S  +                      +       +  +D+ + +S+SG ++
Sbjct: 9   NICLFGIGSSLCVARDAYLKFLRLDKACVLNDDWHSQLLQARNMRPEDVGLFISYSGQTE 68

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           EL       ++    +I IT    S ++  AD  L +        +G    +S I QL +
Sbjct: 69  ELIKCAEAVKKSGAKMILITRFAASALSDLADYNLYVAANESLFRNGA--MSSRISQLNM 126

Query: 186 GDALAIALLE 195
            D L  A   
Sbjct: 127 IDILYTAYAN 136


>gi|124485464|ref|YP_001030080.1| hypothetical protein Mlab_0640 [Methanocorpusculum labreanum Z]
 gi|124363005|gb|ABN06813.1| putative signal transduction protein with CBS domains
           [Methanocorpusculum labreanum Z]
          Length = 292

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 54/125 (43%), Gaps = 3/125 (2%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T         +    +  ++    L  A+    +++     VV E   L GI+T  DI 
Sbjct: 165 MTSLPKKQIREYMNSPLISLEPDMTLAYAMKTFLQRKIHGAPVV-ENGTLLGILTMTDIV 223

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               +++ T S V DVM+     +  D  L   ++  ++ ++  ++V +D  K IGI+  
Sbjct: 224 SALDREMPTTSLVADVMVTRVITMPGDMRLYEVIKQFKEQHVGRVIVTEDE-KPIGILTH 282

Query: 333 LDLLR 337
            D+++
Sbjct: 283 SDIIQ 287



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L    + + M      +  D  L  AM+   Q  I    VV +    +GI+   D++  
Sbjct: 168 LPKKQIREYMNSPLISLEPDMTLAYAMKTFLQRKIHGAPVV-ENGTLLGILTMTDIVSA 225


>gi|313201892|ref|YP_004040550.1| cbs domain-containing membrane protein [Methylovorus sp. MP688]
 gi|312441208|gb|ADQ85314.1| CBS domain containing membrane protein [Methylovorus sp. MP688]
          Length = 397

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 22/150 (14%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
                F           S+  V+ G  L +A  +L       + V+D+ +++ GIIT+GD
Sbjct: 238 AYRRRFGEIRCQDIMSRSLITVEFGTTLEEAWQLLLRHHLKALPVLDKARRVSGIITQGD 297

Query: 272 IFR------------NFHKDLNTLS---------VEDVMIKNPKVILEDTLLTVAMQLLR 310
             R               + +  +          V  +M         D  +   + L+ 
Sbjct: 298 FMRQADLAGYQGIASKLKQVVQRIPFTHTDKPEVVGQIMTNRVITASTDMHIVELIPLVS 357

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +HN+  + VVD  ++  G++   DL+  G+
Sbjct: 358 EHNLHHIPVVDQERRLAGMISQSDLI-AGL 386



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 32/65 (49%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              + +    +  +D+M ++   +   T L  A QLL +H++  L V+D  ++  GI+  
Sbjct: 236 MHAYRRRFGEIRCQDIMSRSLITVEFGTTLEEAWQLLLRHHLKALPVLDKARRVSGIITQ 295

Query: 333 LDLLR 337
            D +R
Sbjct: 296 GDFMR 300


>gi|320008665|gb|ADW03515.1| CBS domain containing protein [Streptomyces flavogriseus ATCC
           33331]
          Length = 133

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 38/107 (35%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
           +     L  A  ++S +R G   V D      GI+TE DI        D +  +      
Sbjct: 14  IGPAHTLRQAARLMSARRIGAAVVHDPDTCGLGILTERDILDAVGAGLDPDAENASGHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V+D     +G+V   D++R
Sbjct: 74  TDVVFASPAWTLEEAAAAMTHGGFRHLIVLDGDG-PVGVVSVRDIIR 119



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 20/54 (37%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M      I     L  A +L+    I   +V D     +GI+   D+L  
Sbjct: 3   VRDAMSTLVLTIGPAHTLRQAARLMSARRIGAAVVHDPDTCGLGILTERDILDA 56


>gi|257065404|ref|YP_003145076.1| drug resistance transporter, EmrB/QacA subfamily [Slackia
           heliotrinireducens DSM 20476]
 gi|256793057|gb|ACV23727.1| drug resistance transporter, EmrB/QacA subfamily [Slackia
           heliotrinireducens DSM 20476]
          Length = 628

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 27/139 (19%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + D   IL   +   V VV +   + G I++GDI R   K       
Sbjct: 484 MKRDAYTVPASATVADVARILVANKTSGVPVVGKAGAVLGFISDGDIMRALSKSETQAVD 543

Query: 279 -------------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
                              DL   +V D   +N      D  +      L    I  + V
Sbjct: 544 LGYYLAAMAEDEAFGDRVHDLLGRNVMDYATENVVCASADEPIDSVCAKLNGRRIKKMPV 603

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           V +  + +G V   D++R+
Sbjct: 604 V-ENGRLVGTVSRSDIVRY 621



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 11/55 (20%), Positives = 24/55 (43%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           S+ DVM ++   +     +    ++L  +  S + VV      +G +   D++R 
Sbjct: 479 SLADVMKRDAYTVPASATVADVARILVANKTSGVPVVGKAGAVLGFISDGDIMRA 533


>gi|254417147|ref|ZP_05030893.1| CP12 domain protein [Microcoleus chthonoplastes PCC 7420]
 gi|196176125|gb|EDX71143.1| CP12 domain protein [Microcoleus chthonoplastes PCC 7420]
          Length = 205

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFR---NFHKDLN 281
               +  ++    + DA+ ++++     + V     Q   GI+TE DI      + KD  
Sbjct: 9   MTTDVVTIRGSATVADAVDLMNDMGLRALIVDRRHDQDAYGIVTETDIVYKVIAYGKDPK 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            + V ++M K   V+  +  +    +L     I    V+ D  K +GI+   D+L  G
Sbjct: 69  KVRVYEIMNKPCIVVNPNLGVEYVARLFANTGIRRAPVIKD--KLLGIISITDILAKG 124



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLL 336
           +  +D+M  +   I     +  A+ L+    +  L+V D    Q A GIV   D++
Sbjct: 3   MKAQDIMTTDVVTIRGSATVADAVDLMNDMGLRALIV-DRRHDQDAYGIVTETDIV 57


>gi|160286268|pdb|2YZQ|A Chain A, Crystal Structure Of Uncharacterized Conserved Protein
           From Pyrococcus Horikoshii
          Length = 282

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 29/166 (17%), Positives = 49/166 (29%), Gaps = 39/166 (23%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F        +                + +V  G PL  A+  L       + VVD    L
Sbjct: 117 FAKSEKYKGVEIEPYY-------QRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNL 169

Query: 264 KGIITEGDIFR--------------------------------NFHKDLNTLSVEDVMIK 291
            GI+ E D+ R                                 F   L    V ++M +
Sbjct: 170 VGIVDETDLLRDSEIVRIMKSTELAASSEEEWILESHPTLLFEKFELQLPNKPVAEIMTR 229

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  V      +      + +++I  L V+      IG++   DLL+
Sbjct: 230 DVIVATPHMTVHEVALKMAKYSIEQLPVIRGEGDLIGLIRDFDLLK 275



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/96 (25%), Positives = 50/96 (52%), Gaps = 4/96 (4%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           A+ +  + +     VV++  KL GII+   I  N  ++   + V+    ++  V+ E+  
Sbjct: 23  ALELFKKYKVRSFPVVNKEGKLVGIISVKRILVNPDEEQLAMLVK----RDVPVVKENDT 78

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  A +L+ +++   ++VVD   K +GI+   D++R
Sbjct: 79  LKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIR 114



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTL 283
              +P+VK    L  A  ++ E  +  V VVD   K  GI+T GDI R +    +    +
Sbjct: 67  KRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIRRYFAKSEKYKGV 126

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +E    +   ++ E T L  A++ L   N   L VVD     +GIV   DLLR
Sbjct: 127 EIEPYYQRYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLLR 180



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + V+ +M +NP  I        A++L +++ +    VV+   K +GI+    +L
Sbjct: 1   MRVKTIMTQNPVTITLPATRNYALELFKKYKVRSFPVVNKEGKLVGIISVKRIL 54


>gi|52549422|gb|AAU83271.1| inosine-5'-monophosphate dehydrogenase related protein V
           [uncultured archaeon GZfos27B6]
          Length = 190

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 5/101 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVE--DVMIKNPKV 295
           + DA  ++       + VV +  +  G++T+GDI      KD    +V+  DVM      
Sbjct: 24  VRDAAKLMKRYGVDSI-VVLKNDEPVGMVTQGDIIGEVVSKDTKPSTVKLKDVMTTPLIT 82

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  L+   +++    I  + V++D  K +GIV  +D+L
Sbjct: 83  ASSNDRLSDIARMMAAKRIRKVPVIEDD-KLVGIVADVDIL 122


>gi|302533315|ref|ZP_07285657.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
 gi|302442210|gb|EFL14026.1| inosine-5'-monophosphate dehydrogenase [Streptomyces sp. C]
          Length = 432

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + DA+++L ++  G   VVD   +  G++T+ D+            + +VM K   
Sbjct: 56  PTQTVADALSLLPKRAHGAGVVVDADNRPVGVVTDHDL----TGVDRFTQLSEVMSKELL 111

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +I  D     A   L   +  +   VD   + +GI+     LR 
Sbjct: 112 LIDADIDPRDAFNQLDAGHRKLAPAVDRDGRLVGILTRKGALRA 155



 Score = 43.7 bits (102), Expect = 0.040,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 19/44 (43%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           P  +     +  A+ LL +      +VVD   + +G+V   DL 
Sbjct: 51  PITLAPTQTVADALSLLPKRAHGAGVVVDADNRPVGVVTDHDLT 94


>gi|239628300|ref|ZP_04671331.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
 gi|239518446|gb|EEQ58312.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
          Length = 281

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/169 (20%), Positives = 65/169 (38%), Gaps = 6/169 (3%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
           R + +LE + +     +    V+ ++  +  + + GIG S      +         P   
Sbjct: 105 RSIQALEDTRKLVDLDELQSCVDILERART-IGLFGIGSSLLAARDMYLKFLRLNKPCIC 163

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                +       +T++D+ ++ S+SG + E+       +   +P+I +T   ++ +   
Sbjct: 164 NDDWHSQLVCARNLTKEDVAVIFSYSGLTKEMLTCAKVLKEQDVPIITVTRFAENELTRL 223

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL---ESRNFSE 201
           AD  L      +      A T S I QL I D L  A +     RN S 
Sbjct: 224 ADCKL--YVSAKELLVRTAATASRISQLNIIDILFTAYVKNNYERNISR 270


>gi|319936490|ref|ZP_08010906.1| IMP dehydrogenase/GMP reductase [Coprobacillus sp. 29_1]
 gi|319808605|gb|EFW05157.1| IMP dehydrogenase/GMP reductase [Coprobacillus sp. 29_1]
          Length = 502

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 54/162 (33%), Gaps = 14/162 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +A+AL       F      V      +  +    +  + S  + 
Sbjct: 51  NIPLVSAIMQSVSNDTMAVALAREGGVSFIYGSQSVESQAEMVRKVKAYKAGFVPSDSN- 109

Query: 231 PLVKIGCPLIDAI--TILSEKRFGCVAVVD--EGQKLKGIITEGDIFRNFHKDLNTLSVE 286
             +     L D I    ++      V + D     KL GI+T  D      +      V 
Sbjct: 110 --IAPDQTLKDVIELKEMTGHSTMAVTI-DGTANGKLVGIVTGRDYR--VSRMDMDTKVS 164

Query: 287 DVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           + M              L  A  ++  + ++ L ++D+ QK 
Sbjct: 165 EFMTPFDKLVTAHSGVSLKEANDIIWDNKLNALPIIDENQKL 206


>gi|323528540|ref|YP_004230692.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1001]
 gi|323385542|gb|ADX57632.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1001]
          Length = 388

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 19/66 (28%), Positives = 33/66 (50%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F +  N L+ ED+M +    +   T    A  LL+++ +  L V+D+ +  +GIV   D
Sbjct: 232 AFSRSFNELTCEDIMSRQVVSVSASTRAVAAWALLKRNKVKALPVIDEERTLVGIVTRAD 291

Query: 335 LLRFGI 340
           L+   I
Sbjct: 292 LVDKRI 297



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 48/121 (39%), Gaps = 17/121 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHK------------ 278
           V      + A  +L   +   + V+DE + L GI+T  D+   R F +            
Sbjct: 253 VSASTRAVAAWALLKRNKVKALPVIDEERTLVGIVTRADLVDKRIFGQFAPFIAYFDGWL 312

Query: 279 ---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               L   +V +VM  +   +  +  +T  + +   +    + V+D     +G++  +DL
Sbjct: 313 RGDALRAPNVGNVMTTDVCTVKANAPITDLVPMFANYGHHHIPVLDFTGHVVGMITQVDL 372

Query: 336 L 336
           +
Sbjct: 373 I 373


>gi|255038304|ref|YP_003088925.1| glucosamine--fructose-6-phosphate aminotransferase [Dyadobacter
           fermentans DSM 18053]
 gi|254951060|gb|ACT95760.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Dyadobacter fermentans DSM 18053]
          Length = 613

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/143 (21%), Positives = 54/143 (37%), Gaps = 3/143 (2%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A   RVVI G G S H G             +  V  A        +I  +D++I +S 
Sbjct: 294 LAQADRVVIVGCGTSWHAGLVAEYMFEELARINVEVEYASEFRYRNPVIKENDIVIAISQ 353

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + +  A +  A+     +  + +   S +A            PE    G+A T +  
Sbjct: 354 SGETADTLAAIELAKSKGATIFGVCNVVGSSIARATHAGAYTHAGPE---IGVASTKAFT 410

Query: 181 MQLAIGDALAIALLESRNFSEND 203
            Q+ +   +AIA+ + +     +
Sbjct: 411 AQVTVLTLMAIAVAKRKGTIAEE 433


>gi|125625226|ref|YP_001033709.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|124494034|emb|CAL99034.1| transcriptional regulator, RpiR family [Lactococcus lactis subsp.
           cremoris MG1363]
 gi|300072036|gb|ADJ61436.1| RpiR family transcriptional regulator [Lactococcus lactis subsp.
           cremoris NZ9000]
          Length = 282

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL S+L    + Q    +E +          G+G S  +                +  
Sbjct: 105 ISSLNSTLNLISNRQLDQTMEILLKANT-CGFFGLGGSNAVALIAFHKFLRMPLHCVYHQ 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T +D   V+S +G + +   ++   +   +P+IA+TS   S +A  AD
Sbjct: 164 DFHFQQMQAAKLTSEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L      E          S + Q+++ DAL +     
Sbjct: 224 VALI--SISEEISFRPEAVASTVSQISLLDALFMMYGMK 260


>gi|188025772|ref|ZP_02959750.2| hypothetical protein PROSTU_01642 [Providencia stuartii ATCC 25827]
 gi|1175523|sp|P46117|YARA_PROST RecName: Full=Uncharacterized HTH-type transcriptional regulator in
           aarA 3'region
 gi|188020427|gb|EDU58467.1| hypothetical protein PROSTU_01642 [Providencia stuartii ATCC 25827]
          Length = 282

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 65/161 (40%), Gaps = 3/161 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++++E SL+           +KI   K R+V+ G+G S  +   +   L      + F  
Sbjct: 107 ITAIEKSLELLDPNTMDEIAQKIVEAK-RIVLFGVGTSAIVAYDIFYKLIRVNKYALFSP 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +  DDL+I ++  G++ ++  +L  A +     I +T   +      AD
Sbjct: 166 DLHVQLSYSSNVDADDLVIAITAKGNTPDINHMLKLANKKGCSTIVLTRFGQDEAVRLAD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +VL    + +    G+   T  ++Q+ + D L    L   N
Sbjct: 226 LVLPYFYDEQLFQTGVI--TPQVLQMVVFDTLFFKYLTLTN 264


>gi|260061319|ref|YP_003194399.1| CBS domain pair protein [Robiginitalea biformata HTCC2501]
 gi|88785451|gb|EAR16620.1| CBS domain pair protein [Robiginitalea biformata HTCC2501]
          Length = 621

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/154 (16%), Positives = 55/154 (35%), Gaps = 6/154 (3%)

Query: 187 DALAIALLESRNFSENDF--YVLHPGGKLGTLFVCASDVMHSGDSIPLV--KIGCPLIDA 242
           DAL +      N S   +                  S  +    S  ++           
Sbjct: 465 DALRVLTASLYNRSLKGYPVATWKKYTCNEVFSGRRSASVRDLMSTRIITAHENDSAALV 524

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + ++    F  + V+D  Q+L G+++  D+       ++  + + D+M         D  
Sbjct: 525 VHLMKWNGFHHLPVLDGNQELIGLLSWKDVGELADSPEIYDMRIADLMKTELITTGPDKS 584

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  A +L+  + I  L VV   ++ IG++   D+
Sbjct: 585 IRSARELMASYGIHCLPVV-SGRELIGLLTSTDI 617


>gi|150391857|ref|YP_001321906.1| CBS domain-containing protein [Alkaliphilus metalliredigens QYMF]
 gi|149951719|gb|ABR50247.1| CBS domain containing protein [Alkaliphilus metalliredigens QYMF]
          Length = 149

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/132 (21%), Positives = 50/132 (37%), Gaps = 28/132 (21%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V     +   + +L +     + VVDE   + GIITEGD+                    
Sbjct: 14  VTKEDTVEKVVKLLLDNGISGLPVVDEENHVVGIITEGDLIYRSKKLKIPSYFTLLDSYI 73

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                +N    +  +    VEDVM K       +  +     L+   N++ + VV++   
Sbjct: 74  FLENPQNLGDQIKKMVGYKVEDVMTKKVVKADINDSVEDVATLMTSKNVNRIPVVENE-I 132

Query: 326 AIGIVHFLDLLR 337
            +GIV   D+++
Sbjct: 133 LVGIVSRRDIIK 144



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 14/54 (25%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M ++   + ++  +   ++LL  + IS L VVD+    +GI+   DL+
Sbjct: 1   MKARDIMTRDVISVTKEDTVEKVVKLLLDNGISGLPVVDEENHVVGIITEGDLI 54


>gi|95930576|ref|ZP_01313311.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
 gi|95133411|gb|EAT15075.1| Cl- channel, voltage gated [Desulfuromonas acetoxidans DSM 684]
          Length = 606

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 52/133 (39%), Gaps = 4/133 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            GK   +             +  V  G  L      +S  +     +++   ++ GII+ 
Sbjct: 452 AGKERNIMKSIRVDDVMTQKLETVPEGMTLRQFTEFISNTKHTNFPLLNPAGEMTGIISI 511

Query: 270 GD-IFRNFHKDLNTLSV-EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--K 325
            D +   F KDL  L V +++       +  D  L  AM+ +   NI  L VVD  Q  +
Sbjct: 512 QDFLGVVFEKDLMDLVVVKELATTEVTTVFGDENLDQAMRKIGYRNIEQLPVVDRQQQSR 571

Query: 326 AIGIVHFLDLLRF 338
            IGIV   D++  
Sbjct: 572 LIGIVSRRDMVSA 584


>gi|330937395|gb|EGH41380.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. pisi str. 1704B]
          Length = 288

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/177 (18%), Positives = 57/177 (32%), Gaps = 7/177 (3%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           S    +L+        L  +  +L          AV  +     RV   G G SG + + 
Sbjct: 90  SVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAAD 145

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
                      +               +   D+ + +S SG S +L       R     L
Sbjct: 146 AQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGATL 205

Query: 142 IAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 206 ITLCPSQT-PLAELSSVNLVIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|253731615|ref|ZP_04865780.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
 gi|253724614|gb|EES93343.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus USA300_TCH959]
          Length = 459

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 144 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 195

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 196 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 251

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 252 ITIDDIL 258



 Score = 45.7 bits (107), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 139 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 198

Query: 336 L 336
           +
Sbjct: 199 I 199


>gi|241895976|ref|ZP_04783272.1| transcriptional regulator [Weissella paramesenteroides ATCC 33313]
 gi|241871019|gb|EER74770.1| transcriptional regulator [Weissella paramesenteroides ATCC 33313]
          Length = 280

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 35/162 (21%), Positives = 61/162 (37%), Gaps = 3/162 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
             ++LE+++    +  +  A + +   +  V + GIG S  +          T       
Sbjct: 103 AENALEATVNLIKADDWSLATDWLINAQ-HVGLFGIGGSSIVALNGYHKFLRTPLHIEQH 161

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
              +        +T  D+ IV+S SG +     +    +  ++ +IAIT   KS +A  A
Sbjct: 162 PDYDVQLMQAVHMTEQDVAIVISHSGRNHGTLNLARQLKANNVKIIAITGHPKSELAKLA 221

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
              LTL    E         +S I QL I D+L   +     
Sbjct: 222 S--LTLASAAEEVNIRSESMSSLIAQLTIMDSLFTLVGVQLG 261


>gi|319789869|ref|YP_004151502.1| Polynucleotide adenylyltransferase region protein [Thermovibrio
           ammonificans HB-1]
 gi|317114371|gb|ADU96861.1| Polynucleotide adenylyltransferase region protein [Thermovibrio
           ammonificans HB-1]
          Length = 881

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 42/111 (37%), Gaps = 1/111 (0%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + +A  +L +       VVD      G++T   + +  +  L    V
Sbjct: 313 MTSPPITVSADVTVEEARKLLMKNSINAAPVVDSAGAFLGVVTRALLDKAIYMGLGGEPV 372

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             VM +  + +  +  L+   +LL     S + VV    + +G+V   DLL
Sbjct: 373 SSVMDREYETVEPEAPLSAVEELLVLKGQSFVPVV-KEGRPVGVVTRTDLL 422



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 3/60 (5%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + R+         V+D+M   P  +  D  +  A +LL +++I+   VVD     +G+V 
Sbjct: 299 LRRSVEP---LKVVKDIMTSPPITVSADVTVEEARKLLMKNSINAAPVVDSAGAFLGVVT 355


>gi|315917184|ref|ZP_07913424.1| CBS domain-containing protein [Fusobacterium gonidiaformans ATCC
           25563]
 gi|313691059|gb|EFS27894.1| CBS domain-containing protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 208

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 13/157 (8%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC---------ASDVMHSGDSIPLVK 234
             GD +A  L  +R+    DF +L     +                + +         + 
Sbjct: 33  ISGDEIAQNLGVTRSALRTDFSILRKMSFISAKQNHGYCFVGEGPKNKIGQIMSEPKQMD 92

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
               + + I  + E   G V + +    L G+++  D+ +    +KDL  L +  VM + 
Sbjct: 93  SKSSVYETIVYMFENDIGSVFITENKNVLVGVVSRKDLLKAALGNKDLEKLPIHMVMTRM 152

Query: 293 P--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           P    + E   +  A++ + +H I  + VV   ++  
Sbjct: 153 PNLIYVTEQDSIKTAVEKIMKHQIDSVAVVKKEKEVC 189



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +M + PK +   + +   +  + +++I  + + ++    +G+V   DLL+  +
Sbjct: 80  KIGQIMSE-PKQMDSKSSVYETIVYMFENDIGSVFITENKNVLVGVVSRKDLLKAAL 135


>gi|222480045|ref|YP_002566282.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222452947|gb|ACM57212.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 379

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/128 (24%), Positives = 54/128 (42%), Gaps = 1/128 (0%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             + +     + V     S P V     L +   +L E       V  EG+KL GI+T  
Sbjct: 51  QLMRSRMEDDTKVSAVMKSAPSVDRHEDLRETARLLVEGDVKIAPVY-EGEKLYGIVTVD 109

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            I       L+ ++V  +  ++   I E   +  A+  LR++ IS L  +D+    +G+V
Sbjct: 110 QILEAVLDSLDAITVGQIATEDVIGINEKDTVGSAINRLRENGISRLPALDEDGHLVGVV 169

Query: 331 HFLDLLRF 338
              D++ F
Sbjct: 170 TTNDIVEF 177



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 43/122 (35%), Gaps = 16/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD------------- 279
           +     +  AI  L E     +  +DE   L G++T  DI     +D             
Sbjct: 135 INEKDTVGSAINRLRENGISRLPALDEDGHLVGVVTTNDIVEFVVRDQERQGSGDRAGDI 194

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
             +  + V D+M         D      ++ +  +N+S L+V         G+V   D+L
Sbjct: 195 DRMLDIPVYDIMSSPVVTATADETAEAVVERMFDNNVSGLVVTPKGADTIAGMVTKTDVL 254

Query: 337 RF 338
           R 
Sbjct: 255 RA 256


>gi|82702298|ref|YP_411864.1| signal-transduction protein [Nitrosospira multiformis ATCC 25196]
 gi|82410363|gb|ABB74472.1| putative signal-transduction protein with CBS domains [Nitrosospira
           multiformis ATCC 25196]
          Length = 149

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 48/112 (42%), Gaps = 6/112 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL---KGIITEGDIFRNFHK---D 279
                 +VK    + +A  ++ +   G V V++E   L    GI+T+ D+         D
Sbjct: 7   CNRDTVIVKRDETIGEAAKLMRQHHVGDVVVIEERDGLNIPVGIVTDRDLVVEIMATGLD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              ++V D+M +    + E   +  A+Q +R   +  L VV +    +GI+ 
Sbjct: 67  AVVITVGDIMEQELVTVKESVGVFEAIQYMRSKTVRRLPVVGENGTLVGILT 118



 Score = 43.7 bits (102), Expect = 0.042,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 31/57 (54%), Gaps = 3/57 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQKAIGIVHFLDLL 336
           + V ++  ++  ++  D  +  A +L+RQH++  ++V+   D     +GIV   DL+
Sbjct: 1   MPVGEICNRDTVIVKRDETIGEAAKLMRQHHVGDVVVIEERDGLNIPVGIVTDRDLV 57


>gi|90423513|ref|YP_531883.1| CBS [Rhodopseudomonas palustris BisB18]
 gi|90105527|gb|ABD87564.1| CBS [Rhodopseudomonas palustris BisB18]
          Length = 330

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 28/126 (22%)

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLN------------ 281
            D   +L   R   V VVD      G+++E D+       R   +D              
Sbjct: 21  ADVARVLLASRVSAVPVVDGDGAPIGVVSEWDLVGQRTSDRIAKRDQWLSRLAEGQPLAA 80

Query: 282 ---------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                      S  ++M +    + E T +    +L+ +H I  + V     + +G+V  
Sbjct: 81  EYLQSVDPANRSAAEIMHRPLIAVPEATPIAEVARLITEHRIKRVFVT-RDGRLVGVVSR 139

Query: 333 LDLLRF 338
            DL+R 
Sbjct: 140 SDLVRA 145



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/51 (19%), Positives = 22/51 (43%), Gaps = 1/51 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
               +  V    P+ +   +++E R   V V     +L G+++  D+ R +
Sbjct: 97  MHRPLIAVPEATPIAEVARLITEHRIKRVFVT-RDGRLVGVVSRSDLVRAY 146



 Score = 41.0 bits (95), Expect = 0.27,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 22/52 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             DVM     V+   +      ++L    +S + VVD     IG+V   DL+
Sbjct: 3   ARDVMTAGVSVVGLSSSSADVARVLLASRVSAVPVVDGDGAPIGVVSEWDLV 54


>gi|116513134|ref|YP_812041.1| transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
 gi|116108788|gb|ABJ73928.1| Transcriptional regulator [Lactococcus lactis subsp. cremoris SK11]
          Length = 282

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +SSL S+L    + Q    +E +          G+G S  +                +  
Sbjct: 105 ISSLNSTLNLISNRQLDQTMEILLKANT-CGFFGLGGSNAVALIAFHKFLRMPLHCVYHQ 163

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T +D   V+S +G + +   ++   +   +P+IA+TS   S +A  AD
Sbjct: 164 DFHFQQMQAAKLTSEDCAFVISHTGKNKDTMHLVEILKSRGVPIIALTSFASSPLAKAAD 223

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L      E          S + Q+++ DAL +     
Sbjct: 224 VALI--SISEEISFRPEAVASTVSQISLLDALFMMYGMK 260


>gi|320141175|gb|EFW33022.1| magnesium transporter [Staphylococcus aureus subsp. aureus MRSA131]
          Length = 459

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 144 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 195

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 196 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 251

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 252 ITIDDIL 258



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 139 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 198

Query: 336 L 336
           +
Sbjct: 199 I 199


>gi|254514837|ref|ZP_05126898.1| glucokinase/transcriptional regulator, RpiR family, fusion [gamma
           proteobacterium NOR5-3]
 gi|219677080|gb|EED33445.1| glucokinase/transcriptional regulator, RpiR family, fusion [gamma
           proteobacterium NOR5-3]
          Length = 294

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 7/162 (4%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            L +L   L   L       ++++ A K  +   G+G S  +             P    
Sbjct: 111 SLRALGDQLPPTL---VDAVIDRLLAAK-HIFFFGLGISSAVAQDAEHHFFRFALPVTAH 166

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                         +DDL  ++S +G + +L  I   A      ++A+T+   S +A  +
Sbjct: 167 ADVLMQRMHAAAARQDDLFFMISHTGRTRDLVDIANLAAARGAQVVALTA-AGSPLAKAS 225

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + + L    ++  +   P TS +  LA+ D LA  +   R 
Sbjct: 226 SLAIELEVSEDTDAY--MPMTSRLAHLAVLDVLAAGVSLRRG 265


>gi|197118675|ref|YP_002139102.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
           bemidjiensis Bem]
 gi|197088035|gb|ACH39306.1| adenosine-specific tRNA nucleotidyltransferase [Geobacter
           bemidjiensis Bem]
          Length = 875

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 2/125 (1%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
             +             +  +   C + +A   L       + V+ E   L GII+   + 
Sbjct: 303 RRVDPRRVARDIMSSPVKTISPDCSIEEARERLVRYNVSAMPVISEEGVL-GIISRKTVE 361

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +  + +LN + V D M     V   DT +T     +   +  ++ VV +    IG++   
Sbjct: 362 KALYHNLNQVPVSDYMHSEFHVASPDTPITEIQSYMVGGDARLVPVVSELG-LIGVITRT 420

Query: 334 DLLRF 338
           DLLR+
Sbjct: 421 DLLRY 425



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/70 (18%), Positives = 28/70 (40%), Gaps = 4/70 (5%)

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           +  + R            D+M    K I  D  +  A + L ++N+S + V+ +    +G
Sbjct: 298 DAVLRRRVDP---RRVARDIMSSPVKTISPDCSIEEARERLVRYNVSAMPVISEEG-VLG 353

Query: 329 IVHFLDLLRF 338
           I+    + + 
Sbjct: 354 IISRKTVEKA 363


>gi|209542640|ref|YP_002274869.1| peptidase M50 [Gluconacetobacter diazotrophicus PAl 5]
 gi|209530317|gb|ACI50254.1| peptidase M50 [Gluconacetobacter diazotrophicus PAl 5]
          Length = 377

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 42/95 (44%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             L +A+            V+D   +L+G++T+  +  +   D     V D M      I
Sbjct: 249 TTLDEAVRAAIRCAQTLFPVMDGQGRLQGVLTQAALINHLQIDGPGAVVADAMTPAIPAI 308

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                L+ A++LL++ N+  + VVD   + +G++ 
Sbjct: 309 HPYQPLSEALRLLQEGNLPAVAVVDAGDRLVGLIT 343



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +IP +    PL +A+ +L E     VAVVD G +L G+IT             + ++
Sbjct: 301 MTPAIPAIHPYQPLSEALRLLQEGNLPAVAVVDAGDRLVGLIT-------------SETI 347

Query: 286 EDVMIKNPKVILEDTLLTV 304
            ++M+ +   + +      
Sbjct: 348 GELMLTHGIRVTQGRRAAD 366


>gi|329729029|gb|EGG65441.1| magnesium transporter [Staphylococcus aureus subsp. aureus 21193]
          Length = 461

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|304393083|ref|ZP_07375012.1| signal-transduction protein [Ahrensia sp. R2A130]
 gi|303294848|gb|EFL89219.1| signal-transduction protein [Ahrensia sp. R2A130]
          Length = 145

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 50/115 (43%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNT 282
            G +   +     L DA TIL+++R G +  VDE  K+ GI++E DI +   KD      
Sbjct: 10  KGHNTVTISQSETLADAATILADRRIGAILAVDENGKMTGILSERDIIKFLAKDGAAALE 69

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +   M +N         +     ++ +     + V+ +  +  GI+   D+++
Sbjct: 70  KQISACMTRNVVTCQRRDTIDAVRTMMGEGRFRHVPVM-EDGELAGIISVSDVVK 123


>gi|298694247|gb|ADI97469.1| probable magnesium transporter [Staphylococcus aureus subsp. aureus
           ED133]
          Length = 461

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|257885766|ref|ZP_05665419.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,501]
 gi|257821622|gb|EEV48752.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,501]
          Length = 391

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|57650201|ref|YP_185881.1| magnesium transporter [Staphylococcus aureus subsp. aureus COL]
 gi|87160433|ref|YP_493610.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|88194702|ref|YP_499498.1| magnesium transporter [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|151221091|ref|YP_001331913.1| magnesium transporter [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|161509206|ref|YP_001574865.1| Mg2+/Co2+ transporter [Staphylococcus aureus subsp. aureus
           USA300_TCH1516]
 gi|221142153|ref|ZP_03566646.1| Mg2+/Co2+ transporter [Staphylococcus aureus subsp. aureus str.
           JKD6009]
 gi|253732633|ref|ZP_04866798.1| magnesium transporter [Staphylococcus aureus subsp. aureus TCH130]
 gi|258452041|ref|ZP_05700057.1| magnesium transporter [Staphylococcus aureus A5948]
 gi|262049354|ref|ZP_06022228.1| hypothetical protein SAD30_1652 [Staphylococcus aureus D30]
 gi|262052364|ref|ZP_06024566.1| hypothetical protein SA930_0106 [Staphylococcus aureus 930918-3]
 gi|282923687|ref|ZP_06331366.1| magnesium transporter [Staphylococcus aureus A9765]
 gi|284023935|ref|ZP_06378333.1| magnesium transporter [Staphylococcus aureus subsp. aureus 132]
 gi|294847993|ref|ZP_06788740.1| magnesium transporter [Staphylococcus aureus A9754]
 gi|304381437|ref|ZP_07364088.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|57284387|gb|AAW36481.1| magnesium transporter [Staphylococcus aureus subsp. aureus COL]
 gi|87126407|gb|ABD20921.1| magnesium transporter [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|87202260|gb|ABD30070.1| magnesium transporter [Staphylococcus aureus subsp. aureus NCTC
           8325]
 gi|150373891|dbj|BAF67151.1| magnesium transporter [Staphylococcus aureus subsp. aureus str.
           Newman]
 gi|160368015|gb|ABX28986.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|253729411|gb|EES98140.1| magnesium transporter [Staphylococcus aureus subsp. aureus TCH130]
 gi|257860256|gb|EEV83088.1| magnesium transporter [Staphylococcus aureus A5948]
 gi|259159736|gb|EEW44778.1| hypothetical protein SA930_0106 [Staphylococcus aureus 930918-3]
 gi|259162586|gb|EEW47154.1| hypothetical protein SAD30_1652 [Staphylococcus aureus D30]
 gi|269940507|emb|CBI48885.1| putative divalent cation transport protein [Staphylococcus aureus
           subsp. aureus TW20]
 gi|282593073|gb|EFB98073.1| magnesium transporter [Staphylococcus aureus A9765]
 gi|294824793|gb|EFG41215.1| magnesium transporter [Staphylococcus aureus A9754]
 gi|302750833|gb|ADL65010.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus str. JKD6008]
 gi|304340010|gb|EFM05953.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus ATCC BAA-39]
 gi|315197537|gb|EFU27873.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus CGS01]
 gi|329313678|gb|AEB88091.1| Magnesium transporter [Staphylococcus aureus subsp. aureus T0131]
 gi|329731159|gb|EGG67530.1| magnesium transporter [Staphylococcus aureus subsp. aureus 21189]
          Length = 461

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|17545968|ref|NP_519370.1| hypothetical protein RSc1249 [Ralstonia solanacearum GMI1000]
 gi|17428263|emb|CAD14951.1| probable transcription regulator protein [Ralstonia solanacearum
           GMI1000]
          Length = 302

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/181 (20%), Positives = 68/181 (37%), Gaps = 11/181 (6%)

Query: 22  STVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
              Q     I     G+  L  +L  +    F  AV+ +   +  + I G  +S  +   
Sbjct: 121 QPEQIVDEFIKGSIAGMQQLRQALDQK---AFAQAVDMLADTQA-IWIAGSRRSFPVAVY 176

Query: 82  LASTLASTGTPSFFVHAAEASH-GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
           L   L  T        A  + H G +  +   D++I +S+  +++E   +   AR+    
Sbjct: 177 LDYALQHTDKRVGLFSALGSMHLGQIRSVREGDVLIAISFMPNAEETIEVAQQARQRGAR 236

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           +IA+T    S +A  A++ L      +S   G     +    + +  +L IAL      S
Sbjct: 237 MIAVTDSRMSPLAREAEVTL---VVQDSTTFGF---RALTATMGLAQSLFIALAYRLELS 290

Query: 201 E 201
            
Sbjct: 291 S 291


>gi|150016983|ref|YP_001309237.1| inosine 5-monophosphate dehydrogenase [Clostridium beijerinckii
           NCIMB 8052]
 gi|149903448|gb|ABR34281.1| IMP dehydrogenase [Clostridium beijerinckii NCIMB 8052]
          Length = 502

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/170 (21%), Positives = 63/170 (37%), Gaps = 12/170 (7%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCAS 221
           K  ES      P  SAIMQ    D +A+AL +     F      + +    +  +    S
Sbjct: 42  KGEESSLSINIPLVSAIMQSVSDDKMAVALAKEGGVSFVYGSQSIENEAAMVARVKNYKS 101

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHK 278
             + S  +   +K    L + + I        +AV ++     KL GI+T  D      +
Sbjct: 102 GFVTSDSN---IKPDTTLEEVVEIKERTGHSTMAVTEDGTPNGKLLGIVTSRDYR--ITR 156

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
              +  V + M           +  L  A  ++  + +++L +VD  QK 
Sbjct: 157 MDLSTKVSEFMTPFSELIYADSNISLKEANNIIWDNKLNMLPLVDKDQKL 206


>gi|332975856|gb|EGK12734.1| CBS domain protein [Desmospora sp. 8437]
          Length = 203

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/145 (23%), Positives = 64/145 (44%), Gaps = 11/145 (7%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        + +    + DAI  +  +  G + VV EG  L
Sbjct: 50  FYSGKTGNQLLGEHIRKLTVKDYKSVPVVCQEETSVYDAICTMFLEDVGTLYVVKEGGLL 109

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVIL---EDTLLTVAMQLLRQHNISVLM 318
            G+I+  D+ +    ++DL T+ V  +M + P +I    ED+LL  A +L+  + +  L 
Sbjct: 110 VGVISRKDLLKSSMGNQDLQTIPVGVIMTRMPNIISCRVEDSLLDAAGKLIH-NQVDSLP 168

Query: 319 VVDDCQ-----KAIGIVHFLDLLRF 338
           VV + +     + +G +    + + 
Sbjct: 169 VVKEEKGGDRLEIVGRITKTTITKA 193


>gi|222151658|ref|YP_002560814.1| hypothetical protein MCCL_1411 [Macrococcus caseolyticus JCSC5402]
 gi|222120783|dbj|BAH18118.1| conserved hypothetical protein [Macrococcus caseolyticus JCSC5402]
          Length = 212

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/106 (23%), Positives = 47/106 (44%), Gaps = 8/106 (7%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-------TLSVEDVMI 290
            +  AI +++EK    + +VD+ Q+L+GII++ +I       L         + +  +M 
Sbjct: 19  SIAQAIVLMNEKNIRHLPIVDDQQQLQGIISDREIKEVLPSLLKHDEAIDYNVPISQIMQ 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           KN         +          +I+ + VV   +K +GIV   D+L
Sbjct: 79  KNVITCHPLDFVADIAVDFYDASIASIPVV-QNEKVVGIVTSKDML 123



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 24/47 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           VE +M        ++  +  A+ L+ + NI  L +VDD Q+  GI+ 
Sbjct: 3   VERIMTSPCITFNKEGSIAQAIVLMNEKNIRHLPIVDDQQQLQGIIS 49


>gi|119356025|ref|YP_910669.1| signal-transduction protein [Chlorobium phaeobacteroides DSM 266]
 gi|119353374|gb|ABL64245.1| putative signal-transduction protein with CBS domains [Chlorobium
           phaeobacteroides DSM 266]
          Length = 148

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                  +K  C + +A+ ++   +   + V         GI+TE DI           H
Sbjct: 16  MQKDYHTIKGSCTVAEALQLMKRTKESGLIVEPRNEDDCYGIVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     +  +M K    +     +  A++L+++ N+  L V+ +  K IG+++  D+L 
Sbjct: 76  RDPWNTPIFQIMSKPIISVNPSLRIKYALRLMKRTNVRRLTVM-ENNKVIGVLNMTDVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L TL V D+M K+   I     +  A+QL+++   S L+V   +     GIV   D+L
Sbjct: 7   LRTLPVSDLMQKDYHTIKGSCTVAEALQLMKRTKESGLIVEPRNEDDCYGIVTEKDIL 64


>gi|170734687|ref|YP_001773801.1| CBS domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169820725|gb|ACA95306.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
          Length = 141

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 48/115 (41%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L +A  ++S+   G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIGPTQSLREAARLMSDLNVGALPVCD-GTRLIGMLTDRDIVVRAVSIGVPPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +VE V+        ED  ++   + +    I  + VVD  ++ +GIV   DL   
Sbjct: 67  AVEGVVSGPANWCYEDDDISAVQKKMEGAQIRRVPVVDRQKRLVGIVALGDLASA 121



 Score = 52.6 bits (125), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 25/52 (48%), Gaps = 1/52 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V +VM ++   I     L  A +L+   N+  L V D   + IG++   D++
Sbjct: 4   VSEVMTRDAATIGPTQSLREAARLMSDLNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|92112227|ref|YP_572155.1| RpiR family transcriptional regulator [Chromohalobacter salexigens
           DSM 3043]
 gi|91795317|gb|ABE57456.1| transcriptional regulator, RpiR family [Chromohalobacter salexigens
           DSM 3043]
          Length = 287

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 40/195 (20%), Positives = 74/195 (37%), Gaps = 6/195 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G   ++ +  +  L  I        SL   L  +       AV  +   +  +V    G 
Sbjct: 81  GRRFIQEANEEDGLGVIYDTAAQTLSLNRELMEQAD--VEGAVAMLDDARQILVFGAGGG 138

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           S  +  ++   L   G        A         +  +D+++ LS +G + E+      A
Sbjct: 139 STVMAQEMQFRLVRLGYAISAYPQALLPRMVASTLEPEDVVVTLSVTGYTPEIVEAAELA 198

Query: 135 RRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
           R++   ++AIT+   S +A  A+IVL L        +   P++S    +A  D LA+ L 
Sbjct: 199 RQYGARVLAITA-VGSPLADTANIVLPLAARETDYIY--FPSSSRYAMMAAIDMLALGLA 255

Query: 195 -ESRNFSENDFYVLH 208
              R+ + +    L 
Sbjct: 256 LRHRDRTRDKLRRLK 270


>gi|88859967|ref|ZP_01134606.1| CBS domain protein [Pseudoalteromonas tunicata D2]
 gi|88817961|gb|EAR27777.1| CBS domain protein [Pseudoalteromonas tunicata D2]
          Length = 143

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 4/109 (3%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----LSVEDVM 289
           K    + +A   L         V+++ +++ G ++E D  +    D        +V+++M
Sbjct: 18  KATMSVAEASERLLLSHQSGGPVLNDNKQVIGFLSEQDCIKRMLHDTYLSEAFFTVQEIM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  +  +  +    Q + ++   +  VVD     IG +   ++L+ 
Sbjct: 78  TSSPLTVTAEHSIFELAQQMTENKPKIYPVVDSDNHLIGTIGRTEVLKA 126


>gi|15923999|ref|NP_371533.1| Mg2 transporter [Staphylococcus aureus subsp. aureus Mu50]
 gi|15926597|ref|NP_374130.1| hypothetical protein SA0867 [Staphylococcus aureus subsp. aureus
           N315]
 gi|21282619|ref|NP_645707.1| hypothetical protein MW0890 [Staphylococcus aureus subsp. aureus
           MW2]
 gi|49485784|ref|YP_043005.1| putative divalent cation transport protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|82750621|ref|YP_416362.1| magnesium transporter [Staphylococcus aureus RF122]
 gi|148267441|ref|YP_001246384.1| magnesium transporter [Staphylococcus aureus subsp. aureus JH9]
 gi|150393494|ref|YP_001316169.1| magnesium transporter [Staphylococcus aureus subsp. aureus JH1]
 gi|156979334|ref|YP_001441593.1| hypothetical protein SAHV_1003 [Staphylococcus aureus subsp. aureus
           Mu3]
 gi|253316170|ref|ZP_04839383.1| hypothetical protein SauraC_08507 [Staphylococcus aureus subsp.
           aureus str. CF-Marseille]
 gi|255005797|ref|ZP_05144398.2| hypothetical protein SauraM_04990 [Staphylococcus aureus subsp.
           aureus Mu50-omega]
 gi|257795258|ref|ZP_05644237.1| magnesium transporter [Staphylococcus aureus A9781]
 gi|258406907|ref|ZP_05680060.1| magnesium transporter [Staphylococcus aureus A9763]
 gi|258421875|ref|ZP_05684796.1| magnesium transporter [Staphylococcus aureus A9719]
 gi|258441485|ref|ZP_05690845.1| magnesium transporter [Staphylococcus aureus A8115]
 gi|258446965|ref|ZP_05695118.1| magnesium transporter [Staphylococcus aureus A6300]
 gi|258449943|ref|ZP_05698041.1| magnesium transporter [Staphylococcus aureus A6224]
 gi|258455039|ref|ZP_05703002.1| magnesium transporter [Staphylococcus aureus A5937]
 gi|269202623|ref|YP_003281892.1| magnesium transporter [Staphylococcus aureus subsp. aureus ED98]
 gi|282894034|ref|ZP_06302265.1| magnesium transporter [Staphylococcus aureus A8117]
 gi|282916260|ref|ZP_06324022.1| magnesium transporter [Staphylococcus aureus subsp. aureus D139]
 gi|282927230|ref|ZP_06334852.1| magnesium transporter [Staphylococcus aureus A10102]
 gi|283770075|ref|ZP_06342967.1| magnesium transporter [Staphylococcus aureus subsp. aureus H19]
 gi|295405812|ref|ZP_06815621.1| magnesium transporter [Staphylococcus aureus A8819]
 gi|296275573|ref|ZP_06858080.1| magnesium transporter [Staphylococcus aureus subsp. aureus MR1]
 gi|297208358|ref|ZP_06924788.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297245403|ref|ZP_06929274.1| magnesium transporter [Staphylococcus aureus A8796]
 gi|300912434|ref|ZP_07129877.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|13700812|dbj|BAB42108.1| SA0867 [Staphylococcus aureus subsp. aureus N315]
 gi|14246779|dbj|BAB57171.1| Mg2 transporter [Staphylococcus aureus subsp. aureus Mu50]
 gi|21204057|dbj|BAB94755.1| MW0890 [Staphylococcus aureus subsp. aureus MW2]
 gi|49244227|emb|CAG42653.1| putative divalent cation transport protein [Staphylococcus aureus
           subsp. aureus MSSA476]
 gi|82656152|emb|CAI80563.1| probable magnesium transporter [Staphylococcus aureus RF122]
 gi|147740510|gb|ABQ48808.1| magnesium transporter [Staphylococcus aureus subsp. aureus JH9]
 gi|149945946|gb|ABR51882.1| magnesium transporter [Staphylococcus aureus subsp. aureus JH1]
 gi|156721469|dbj|BAF77886.1| hypothetical protein [Staphylococcus aureus subsp. aureus Mu3]
 gi|257789230|gb|EEV27570.1| magnesium transporter [Staphylococcus aureus A9781]
 gi|257841446|gb|EEV65887.1| magnesium transporter [Staphylococcus aureus A9763]
 gi|257842208|gb|EEV66636.1| magnesium transporter [Staphylococcus aureus A9719]
 gi|257852275|gb|EEV76201.1| magnesium transporter [Staphylococcus aureus A8115]
 gi|257854297|gb|EEV77247.1| magnesium transporter [Staphylococcus aureus A6300]
 gi|257856863|gb|EEV79766.1| magnesium transporter [Staphylococcus aureus A6224]
 gi|257862919|gb|EEV85684.1| magnesium transporter [Staphylococcus aureus A5937]
 gi|262074913|gb|ACY10886.1| magnesium transporter [Staphylococcus aureus subsp. aureus ED98]
 gi|282319700|gb|EFB50048.1| magnesium transporter [Staphylococcus aureus subsp. aureus D139]
 gi|282590919|gb|EFB95994.1| magnesium transporter [Staphylococcus aureus A10102]
 gi|282763520|gb|EFC03649.1| magnesium transporter [Staphylococcus aureus A8117]
 gi|283460222|gb|EFC07312.1| magnesium transporter [Staphylococcus aureus subsp. aureus H19]
 gi|283470220|emb|CAQ49431.1| magnesium transporter [Staphylococcus aureus subsp. aureus ST398]
 gi|285816687|gb|ADC37174.1| Magnesium transporter [Staphylococcus aureus 04-02981]
 gi|294969247|gb|EFG45267.1| magnesium transporter [Staphylococcus aureus A8819]
 gi|296887097|gb|EFH26000.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus ATCC 51811]
 gi|297177706|gb|EFH36956.1| magnesium transporter [Staphylococcus aureus A8796]
 gi|300886680|gb|EFK81882.1| MgtE family magnesium transporter [Staphylococcus aureus subsp.
           aureus TCH70]
 gi|302332619|gb|ADL22812.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus aureus subsp. aureus JKD6159]
 gi|312829404|emb|CBX34246.1| magnesium transporter [Staphylococcus aureus subsp. aureus ECT-R 2]
 gi|315130413|gb|EFT86400.1| hypothetical protein CGSSa03_03293 [Staphylococcus aureus subsp.
           aureus CGS03]
 gi|329728213|gb|EGG64652.1| magnesium transporter [Staphylococcus aureus subsp. aureus 21172]
          Length = 461

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|332638576|ref|ZP_08417439.1| 6-phospho 3-hexuloisomerase domain protein [Weissella cibaria KACC
           11862]
          Length = 177

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 59/176 (33%), Gaps = 14/176 (7%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L+ L  ++           V +      R+ + G G+SG      A  L   G  +F V 
Sbjct: 7   LTELAQNVDDVNDEALLGLVNQ----SERIFLAGAGRSGLALKSFAMRLTQLGKQAFVVG 62

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      IT  DL+++ S SG + +L      A      +   ++   S +A  + 
Sbjct: 63  ETTTP-----AITASDLLVIASSSGETTQLVQFAATASDVGATIWLWSTGTDSTIARQSQ 117

Query: 158 IVLTL---PKEPESCPHGLAPTTSAIMQLAI--GDALAIALLESRNFSENDFYVLH 208
            V  L    K  ++      P  S   Q     GD   +  ++    +E+     H
Sbjct: 118 FVTLLAGKSKFADADTATKQPMGSLFEQSVWLFGDIFTMDYMQRYQITESFMKARH 173


>gi|325117953|emb|CBZ53504.1| hypothetical protein NCLIV_032920 [Neospora caninum Liverpool]
          Length = 560

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 37/170 (21%), Positives = 69/170 (40%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI  AL+       N+   L    ++  +    +  +      
Sbjct: 50  RTPIVSSPMDTVTEHRMAIGCALMGGMGVIHNNMETLRQVSEVQKVKRYENGFI---LDP 106

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            +++    + D   I     +  V + D G    KL+GI+T  DI  +F  D +T  + +
Sbjct: 107 FVLRPTDTVADVYRIKERYGYSSVPITDTGTLGGKLQGIVTSRDI--DFLTDRHT-PLSE 163

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM  +  V  E   L  A ++LR+     L +V+D  + + ++   DL +
Sbjct: 164 VMTSDLIVGHEPIQLAEANEILRESKKGKLPIVNDRHELVALISRNDLKK 213


>gi|284053596|ref|ZP_06383806.1| hypothetical protein AplaP_19246 [Arthrospira platensis str.
           Paraca]
          Length = 204

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDI---FRNFHKDLN 281
               +  ++    + +A+  +++     + V     Q   GI+TE D+      + KD  
Sbjct: 8   MTTDVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVIYKVTAYGKDPK 67

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            + V ++M K    I  D  +    +L  Q  I    V+ +    +GIV   D+L  G
Sbjct: 68  KMRVYEIMTKPCISINPDLGVEYVARLFAQTGIRRAPVIQEE--LLGIVSITDILSKG 123



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDLL 336
           L  +D+M  +   I     +  A++ +    +  L+V     Q A GIV   D++
Sbjct: 2   LKAKDIMTTDVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVI 56


>gi|225387915|ref|ZP_03757679.1| hypothetical protein CLOSTASPAR_01685 [Clostridium asparagiforme
           DSM 15981]
 gi|225045984|gb|EEG56230.1| hypothetical protein CLOSTASPAR_01685 [Clostridium asparagiforme
           DSM 15981]
          Length = 289

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 30/163 (18%), Positives = 65/163 (39%), Gaps = 3/163 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
              ++ L  ++    +      + +++  +  V +  +G +  +    A  L   G P+ 
Sbjct: 111 ANKVAELTETVNMMDADNLEQILRRLENAR-MVQLAAVGNTIPVAMDGAFKLNQLGIPAV 169

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                EA       +  +D+++++S SGSS  L+++   AR     +I IT+   S +A 
Sbjct: 170 AGEIWEAQAAYTFNLGPEDVVLIISNSGSSRRLQSLAQGARENRSTVIVITNNPDSPLAR 229

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            +D  +                 S +   A+ + L + LL S+
Sbjct: 230 ISDYRIVT--ATREKLLTEEFWFSRVTATAVMEILYLLLLNSK 270


>gi|331006879|ref|ZP_08330129.1| N-acetylneuraminate synthase [gamma proteobacterium IMCC1989]
 gi|330419310|gb|EGG93726.1| N-acetylneuraminate synthase [gamma proteobacterium IMCC1989]
          Length = 748

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 4/109 (3%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            ++       +V     L++A+  +S+ +   V  V E  KL+G++T+GDI R   ++ +
Sbjct: 1   MIIERNIIKFIVFAEDSLLNALRKISDNKSRLVFSVSESGKLEGVLTDGDIRRWLLENKD 60

Query: 282 ---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
               + V  V  K+   + E+      +     + IS + ++D     +
Sbjct: 61  ADLNIPVNKVSNKHYVSLHEEATTEEIIAQFN-NRISTIPIIDKQGHLV 108


>gi|292656583|ref|YP_003536480.1| inosine-5-monophosphate dehydrogenase-like protein [Haloferax
           volcanii DS2]
 gi|291371878|gb|ADE04105.1| inosine-5-monophosphate dehydrogenase-like protein [Haloferax
           volcanii DS2]
          Length = 145

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 31/113 (27%), Positives = 51/113 (45%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
             + +  V++G  + D    +  +  G V VV       GI+TE D  R      K L+ 
Sbjct: 7   MTEEVATVELGSSVADCAQTMLREGAGSV-VVMADGGPAGIVTESDALRAGVASGKPLSA 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +    VM    K I  D+   VA + +R++ +  L+VVD  +  +GIV   D+
Sbjct: 66  VPTRAVMSSPIKWIRPDSTTRVAAEKMRENRVKKLVVVDGSEM-VGIVTATDI 117



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V+D+M +    +   + +    Q + +     ++V+ D     GIV   D LR G+
Sbjct: 1   MRVDDIMTEEVATVELGSSVADCAQTMLREGAGSVVVMADGG-PAGIVTESDALRAGV 57


>gi|258435273|ref|ZP_05689012.1| magnesium transporter [Staphylococcus aureus A9299]
 gi|257848934|gb|EEV72917.1| magnesium transporter [Staphylococcus aureus A9299]
          Length = 461

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 55/127 (43%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           GG + T ++         +++ LVK   P  + I ++         VVD+  KL G+++ 
Sbjct: 146 GGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVI--------FVVDDDGKLVGVLSL 197

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+        N   +ED+M +    +          Q++R ++   + V+D  +  +GI
Sbjct: 198 RDLIVA----ENDAYIEDIMNERVISVNVADDQEDVAQVMRDYDFMAVPVIDYQEHLLGI 253

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 254 ITIDDIL 260



 Score = 45.3 bits (106), Expect = 0.013,   Method: Composition-based stats.
 Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 5/61 (8%)

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDL 335
           +  +   +M      +   T +  A+ L++        I V+ VVDD  K +G++   DL
Sbjct: 141 DEDTAGGIMTTEYLSLKAHTPVKEALLLVKAQAPDAETIYVIFVVDDDGKLVGVLSLRDL 200

Query: 336 L 336
           +
Sbjct: 201 I 201


>gi|227819640|ref|YP_002823611.1| hypothetical protein NGR_b14070 [Sinorhizobium fredii NGR234]
 gi|227338639|gb|ACP22858.1| CBS domain containing membrane protein-like conserved hypothetical
           protein [Sinorhizobium fredii NGR234]
          Length = 390

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 32/219 (14%), Positives = 67/219 (30%), Gaps = 33/219 (15%)

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +T      +A   +   T+            P+    +      A+     E  + S  +
Sbjct: 168 LTGRRYPHLAPAPNPHRTV---------DPLPSQRLGVVPDDLQAVLAQYGEVVDISPEE 218

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIP---LVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                   ++      + ++            V     L  A  +L E R   + VV E 
Sbjct: 219 LDSFIHQAQIRAFTRRSGEITCGEIMSRDVLTVAPETTLRKAWRMLVEHRIQALPVVTEK 278

Query: 261 QKLKGIITEGDIFRN--FHKDLNTLS-------------------VEDVMIKNPKVILED 299
             + GI+T+ D  ++     D                        V ++M    +  L +
Sbjct: 279 DGMVGILTQTDFMKHTTLTPDGRLQIGLRERIGNIIGLPAKSPRFVSEIMTTRVQSALPE 338

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T++   +  +    +  + +VD   + +GIV   DL+  
Sbjct: 339 TMVAKLVPPMADMGLHHMPIVDADNRVVGIVTQSDLIAA 377



 Score = 36.0 bits (82), Expect = 7.9,   Method: Composition-based stats.
 Identities = 10/66 (15%), Positives = 25/66 (37%), Gaps = 2/66 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G         S++M +     L      +   +  +++     + +VD   ++ GI+T+ 
Sbjct: 315 GLPAKSPRFVSEIMTTRVQSAL--PETMVAKLVPPMADMGLHHMPIVDADNRVVGIVTQS 372

Query: 271 DIFRNF 276
           D+    
Sbjct: 373 DLIAAL 378


>gi|149245068|ref|XP_001527068.1| inosine-5'-monophosphate dehydrogenase IMD2 [Lodderomyces
           elongisporus NRRL YB-4239]
 gi|146449462|gb|EDK43718.1| inosine-5'-monophosphate dehydrogenase IMD2 [Lodderomyces
           elongisporus NRRL YB-4239]
          Length = 521

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 59/172 (34%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
            AP  S+ M     + +AI +            ++H              V        +
Sbjct: 67  NAPFVSSPMDTVTEEVMAIHMALLGGIG-----IIHHNCTAEEQAEMVKKVKKYENGFIN 121

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
              ++     + +   +  +  F    V D G    KL GIIT  D+  + H   +  +V
Sbjct: 122 DPVVITEDITVGEVKKMKKQLGFTTFPVTDNGKVGGKLLGIITSRDVQFHEH---DNDTV 178

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VM K      +   LT   ++LR+     L +VD     + ++   DL +
Sbjct: 179 GKVMTKELITGKKGITLTEGNEILRKSKKGKLPIVDSEGNLVSLISLTDLQK 230


>gi|126459422|ref|YP_001055700.1| hexulose-6-phosphate isomerase [Pyrobaculum calidifontis JCM 11548]
 gi|126249143|gb|ABO08234.1| hexulose-6-phosphate isomerase [Pyrobaculum calidifontis JCM 11548]
          Length = 202

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 77/186 (41%), Gaps = 20/186 (10%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++     L  E   +F  ++E       ++++ G+G+SG +G   A  L   G  S+ + 
Sbjct: 16  IAKALEKLNLEEVEKFVKSLEDAYKTNKKILVVGVGRSGLVGRAFAMRLRHLGARSYVIG 75

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DL++ +S SG++  + A+   A++    ++A+TS   S +A  AD
Sbjct: 76  ETITP-----SVEEGDLVVAISGSGATQIIVAVAEAAKKMKAKVVAVTSYYDSPLARLAD 130

Query: 158 IVLTLPKEPESCPHG-------------LAPTTSAIM--QLAIGDALAIALLESRNFSEN 202
           +V+ +P   +                  L+P  +      +   DA+   L++    +E+
Sbjct: 131 LVVYVPGRTKLASMDDYFARQILGIHEPLSPLGTLFEDTAMVFLDAVIAELMKRLGKNES 190

Query: 203 DFYVLH 208
           +    H
Sbjct: 191 EMAKRH 196


>gi|257466028|ref|ZP_05630339.1| CBS domain-containing protein [Fusobacterium gonidiaformans ATCC
           25563]
          Length = 195

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 28/157 (17%), Positives = 58/157 (36%), Gaps = 13/157 (8%)

Query: 184 AIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC---------ASDVMHSGDSIPLVK 234
             GD +A  L  +R+    DF +L     +                + +         + 
Sbjct: 20  ISGDEIAQNLGVTRSALRTDFSILRKMSFISAKQNHGYCFVGEGPKNKIGQIMSEPKQMD 79

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
               + + I  + E   G V + +    L G+++  D+ +    +KDL  L +  VM + 
Sbjct: 80  SKSSVYETIVYMFENDIGSVFITENKNVLVGVVSRKDLLKAALGNKDLEKLPIHMVMTRM 139

Query: 293 P--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           P    + E   +  A++ + +H I  + VV   ++  
Sbjct: 140 PNLIYVTEQDSIKTAVEKIMKHQIDSVAVVKKEKEVC 176



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 28/57 (49%), Gaps = 1/57 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  +M + PK +   + +   +  + +++I  + + ++    +G+V   DLL+  +
Sbjct: 67  KIGQIMSE-PKQMDSKSSVYETIVYMFENDIGSVFITENKNVLVGVVSRKDLLKAAL 122


>gi|16799256|ref|NP_469524.1| inosine 5-monophosphate dehydrogenase [Listeria innocua Clip11262]
 gi|16412598|emb|CAC95412.1| lin0179 [Listeria innocua Clip11262]
          Length = 502

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 42/180 (23%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL +    S   F        + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALAKEGGVSF-VFG----SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  H ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTAKKSTTLKEANNIIWDHKLNALPLVDDNEHLVHMVFRKD 214


>gi|69249042|ref|ZP_00604857.1| Glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium DO]
 gi|257878858|ref|ZP_05658511.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,230,933]
 gi|257881494|ref|ZP_05661147.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,502]
 gi|257890716|ref|ZP_05670369.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,410]
 gi|257899487|ref|ZP_05679140.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium Com15]
 gi|258615071|ref|ZP_05712841.1| glycine betaine/carnitine/choline transporter, ATP-binding protein
           [Enterococcus faecium DO]
 gi|293556908|ref|ZP_06675469.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Enterococcus faecium E1039]
 gi|293560278|ref|ZP_06676775.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1162]
 gi|293567789|ref|ZP_06679130.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1071]
 gi|294615102|ref|ZP_06694988.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1636]
 gi|294620891|ref|ZP_06700092.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium U0317]
 gi|314938949|ref|ZP_07846214.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133a04]
 gi|314943500|ref|ZP_07850267.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133C]
 gi|314948206|ref|ZP_07851600.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0082]
 gi|314951566|ref|ZP_07854612.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133A]
 gi|314991572|ref|ZP_07857048.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133B]
 gi|314994905|ref|ZP_07860032.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133a01]
 gi|68194301|gb|EAN08817.1| Glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium DO]
 gi|257813086|gb|EEV41844.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,230,933]
 gi|257817152|gb|EEV44480.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,502]
 gi|257827076|gb|EEV53702.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,410]
 gi|257837399|gb|EEV62473.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium Com15]
 gi|291589374|gb|EFF21181.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1071]
 gi|291592044|gb|EFF23667.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1636]
 gi|291599502|gb|EFF30518.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium U0317]
 gi|291600992|gb|EFF31283.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Enterococcus faecium E1039]
 gi|291605728|gb|EFF35165.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1162]
 gi|313590887|gb|EFR69732.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133a01]
 gi|313593856|gb|EFR72701.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133B]
 gi|313596260|gb|EFR75105.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133A]
 gi|313597872|gb|EFR76717.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133C]
 gi|313641658|gb|EFS06238.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0133a04]
 gi|313645339|gb|EFS09919.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium TX0082]
          Length = 391

 Score = 66.1 bits (160), Expect = 8e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|255970908|ref|ZP_05421494.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T1]
 gi|255973422|ref|ZP_05424008.1| transcriptional regulator [Enterococcus faecalis T2]
 gi|256761277|ref|ZP_05501857.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256963122|ref|ZP_05567293.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|257083436|ref|ZP_05577797.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|257085711|ref|ZP_05580072.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|257088803|ref|ZP_05583164.1| predicted protein [Enterococcus faecalis CH188]
 gi|257418130|ref|ZP_05595124.1| predicted protein [Enterococcus faecalis T11]
 gi|300861831|ref|ZP_07107911.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|255961926|gb|EET94402.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis T1]
 gi|255966294|gb|EET96916.1| transcriptional regulator [Enterococcus faecalis T2]
 gi|256682528|gb|EEU22223.1| transcriptional regulator [Enterococcus faecalis T3]
 gi|256953618|gb|EEU70250.1| transcriptional regulator [Enterococcus faecalis HIP11704]
 gi|256991466|gb|EEU78768.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis Fly1]
 gi|256993741|gb|EEU81043.1| transcriptional regulator [Enterococcus faecalis D6]
 gi|256997615|gb|EEU84135.1| predicted protein [Enterococcus faecalis CH188]
 gi|257159958|gb|EEU89918.1| predicted protein [Enterococcus faecalis T11]
 gi|300848356|gb|EFK76113.1| SIS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|323479506|gb|ADX78945.1| helix-turn-helix domain, rpiR family protein [Enterococcus faecalis
           62]
 gi|327534089|gb|AEA92923.1| RpiR family transcriptional regulator [Enterococcus faecalis OG1RF]
          Length = 253

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAI 63
            +   G S +K +  + A ++   E        +++ L    Q         A++ I   
Sbjct: 53  KMGYAGFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQA 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 113 R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 169

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 170 TNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 229

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 230 VIALIELLA 238


>gi|220932108|ref|YP_002509016.1| putative signal-transduction protein with CBS domains
           [Halothermothrix orenii H 168]
 gi|219993418|gb|ACL70021.1| putative signal-transduction protein with CBS domains
           [Halothermothrix orenii H 168]
          Length = 210

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 50/129 (38%), Gaps = 4/129 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY+           +    +        +V     +  +I  +  +  G + V++E +KL
Sbjct: 58  FYIEKKLQIDEVDELVKIPIKDIMSPPVVVAEDVSIYKSIVTMFLEDVGTLFVINENEKL 117

Query: 264 KGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMV 319
            G+I+  D+ +      DL    V   M + P +I    D     A + +  + I  L V
Sbjct: 118 CGVISRKDLLKMSMGQNDLKRTPVSLAMTRMPNIIIATSDDSYLEATRKIVDNQIDSLPV 177

Query: 320 VDDCQKAIG 328
           V++  + +G
Sbjct: 178 VNEDMEVVG 186



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +L  + ++D+M   P V+ ED  +  ++  +   ++  L V+++ +K  G++   DLL+
Sbjct: 71  ELVKIPIKDIMSP-PVVVAEDVSIYKSIVTMFLEDVGTLFVINENEKLCGVISRKDLLK 128


>gi|194333091|ref|YP_002014951.1| putative signal-transduction protein with CBS domains
           [Prosthecochloris aestuarii DSM 271]
 gi|194310909|gb|ACF45304.1| putative signal-transduction protein with CBS domains
           [Prosthecochloris aestuarii DSM 271]
          Length = 148

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                  +K  C + +A+ ++ +     + V         GI+TE DI           H
Sbjct: 16  MQKDFHTIKGSCTVAEALQLMKKNNESGLIVEPRNEDDCYGIVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    I     +  A++L+++ N+  L V+ +  K IG+++  D+L 
Sbjct: 76  RDPWNTPVFHIMSKPIISINPGLRVKYALRLMKRTNVRRLTVM-ETNKVIGVLNMTDVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L TL V  +M K+   I     +  A+QL++++N S L+V   +     GIV   D+L
Sbjct: 7   LRTLPVSALMQKDFHTIKGSCTVAEALQLMKKNNESGLIVEPRNEDDCYGIVTEKDIL 64


>gi|189500827|ref|YP_001960297.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           phaeobacteroides BS1]
 gi|189496268|gb|ACE04816.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Chlorobium phaeobacteroides BS1]
          Length = 616

 Score = 66.1 bits (160), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 9/140 (6%)

Query: 61  KAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
                R+VI   G S H   IG  L    A+   P    +A+E       +I   D+++V
Sbjct: 296 LRAAKRIVICACGTSWHAGLIGEYLIEEFAN--IPVEVDYASE-FRYRNPIIGPGDVMLV 352

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG + +  A L  AR     +I I +   S +A   D  +     PE    G+A T 
Sbjct: 353 ISQSGETADTLAALQLAREKGATVIGICNVVGSTIARQTDYGIYTHAGPE---IGVASTK 409

Query: 178 SAIMQLAIGDALAIALLESR 197
           +   Q+ +   LA+AL ++R
Sbjct: 410 AFSAQVIVLTMLALALSKAR 429


>gi|302755456|ref|XP_002961152.1| hypothetical protein SELMODRAFT_139940 [Selaginella moellendorffii]
 gi|302766874|ref|XP_002966857.1| hypothetical protein SELMODRAFT_144320 [Selaginella moellendorffii]
 gi|300164848|gb|EFJ31456.1| hypothetical protein SELMODRAFT_144320 [Selaginella moellendorffii]
 gi|300172091|gb|EFJ38691.1| hypothetical protein SELMODRAFT_139940 [Selaginella moellendorffii]
          Length = 444

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 20/133 (15%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIF-----RNFH 277
             + D +  +     ++DA  ++ EK  G + VV  E ++L G I+  DI          
Sbjct: 285 RMTPDQVVSIDADKLVLDAFVLMREKNVGGLPVVKGEQKELVGNISMRDIRFLLLQPELC 344

Query: 278 KDLNTLSVEDVMIKN--------------PKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                L+V D M                 P    E T L   + +L    I  + +VDD 
Sbjct: 345 SRRRELTVYDFMHSAKSSTHDPHPALMMPPITCEESTSLGEVIDVLSTKGIHRIHIVDDK 404

Query: 324 QKAIGIVHFLDLL 336
           Q+ +G+V   D++
Sbjct: 405 QRIVGVVTLRDII 417


>gi|289548683|ref|YP_003473671.1| polynucleotide adenylyltransferase region [Thermocrinis albus DSM
           14484]
 gi|289182300|gb|ADC89544.1| Polynucleotide adenylyltransferase region [Thermocrinis albus DSM
           14484]
          Length = 822

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 2/111 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                 ++    P+  A+  LSE+ F    VVD+  KL G+I +  + +   K      V
Sbjct: 303 MSTPPFVLHKDTPIQLALAELSERNFAGAPVVDDMGKLVGVIYKKTLLKAV-KLFPDKPV 361

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + MI +   +  D  +    ++L      ++ VV+     +G+V  LDL+
Sbjct: 362 SEFMILDFHTLSPDDFVWKTEKILSTFGEKLIPVVEGDN-LVGVVTRLDLI 411



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 19/67 (28%), Positives = 34/67 (50%)

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +      +   L V D+M   P V+ +DT + +A+  L + N +   VVDD  K +G+++
Sbjct: 286 LVSILKGEWVPLRVRDIMSTPPFVLHKDTPIQLALAELSERNFAGAPVVDDMGKLVGVIY 345

Query: 332 FLDLLRF 338
              LL+ 
Sbjct: 346 KKTLLKA 352


>gi|119492298|ref|ZP_01623645.1| Multi-sensor Hybrid Histidine Kinase [Lyngbya sp. PCC 8106]
 gi|119453183|gb|EAW34350.1| Multi-sensor Hybrid Histidine Kinase [Lyngbya sp. PCC 8106]
          Length = 409

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 5/121 (4%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            L    + + H   S  L+K        I  +   +  C+ +V E  KL GIITE DI +
Sbjct: 29  RLIDAITQMNHILGSSCLIKNQDDTSSNIPKIPRFQSSCILIVVEE-KLLGIITERDIVK 87

Query: 275 NFHK--DLNTLSVEDVMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              +  D N  +V +VM      + +     +   + L R++ I  L +VD+ ++ IG++
Sbjct: 88  LTAQGIDFNNTTVGEVMTHPVISLSQTAFKDIFAPLFLFRRYQIRHLPIVDEQERLIGVI 147

Query: 331 H 331
            
Sbjct: 148 S 148



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 52/111 (46%), Gaps = 6/111 (5%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVV----DEGQKLKGIITEGDIF--RNFHKDLNTLSVED 287
            +   L +   ++S  R  C+ +     D+     GIITE DI   +  +       V+D
Sbjct: 179 PLTATLENIAQLMSGFRVSCIVITEPETDDRYLPVGIITERDILQYKLLNISFYQTIVQD 238

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM +   ++  +  L  A Q +++H+I  L+V  +  + +G++   ++L+ 
Sbjct: 239 VMSQPLILLSPEDSLWKAHQEMKKHHIRRLVVSWNWGRGLGLITQTNILKI 289



 Score = 60.3 bits (145), Expect = 4e-07,   Method: Composition-based stats.
 Identities = 22/105 (20%), Positives = 46/105 (43%), Gaps = 6/105 (5%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIKNPKVILEDT 300
           + +    +   + +VDE ++L G+I+   I +       L    VE++M  N        
Sbjct: 123 LFLFRRYQIRHLPIVDEQERLIGVISPERIRKVLQPIHLLKLRRVEEIMTSNVIQAPLTA 182

Query: 301 LLTVAMQLLRQHNISVLMV----VDDCQKAIGIVHFLDLLRFGII 341
            L    QL+    +S +++     DD    +GI+   D+L++ ++
Sbjct: 183 TLENIAQLMSGFRVSCIVITEPETDDRYLPVGIITERDILQYKLL 227


>gi|37680284|ref|NP_934893.1| signal-transduction protein [Vibrio vulnificus YJ016]
 gi|37199031|dbj|BAC94864.1| predicted signal-transduction protein [Vibrio vulnificus YJ016]
          Length = 625

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQK--LKGIITEGDI-FRNFHKDL 280
             + P +     +  A   +++++   + V+   DE  +  + GI+T+ D+  R   +  
Sbjct: 157 NRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGK 216

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +V  VM      +  +  +  AM  + +HN+  L ++    + +GI+   D++R+
Sbjct: 217 SPNEAVASVMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPIL-QGDRLLGIIEATDIVRY 274


>gi|145218958|ref|YP_001129667.1| glutamine--fructose-6-phosphate transaminase [Prosthecochloris
           vibrioformis DSM 265]
 gi|145205122|gb|ABP36165.1| glutamine--fructose-6-phosphate transaminase [Chlorobium
           phaeovibrioides DSM 265]
          Length = 614

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 40/154 (25%), Positives = 68/154 (44%), Gaps = 10/154 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           ++++K  K R+VI   G S H   IG  L    A    P    +A+E       +I  DD
Sbjct: 293 LDRLKQAK-RIVICACGTSWHAGLIGEYLIEDFAR--IPVEVDYASE-FRYRNPIIGPDD 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     ++ I +   S +       +     PE    G+
Sbjct: 349 VVIVISQSGETADTLAALRAAKERGAMVMGICNVVGSTIPRETMCGIYTHAGPEV---GV 405

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           A T +   Q+ +   LA+AL + R  S ++  + 
Sbjct: 406 ASTKAFTAQVIVLYMLALALSKGRTISHDEMRLN 439


>gi|329939676|ref|ZP_08288977.1| hypothetical protein SGM_4469 [Streptomyces griseoaurantiacus M045]
 gi|329301246|gb|EGG45141.1| hypothetical protein SGM_4469 [Streptomyces griseoaurantiacus M045]
          Length = 132

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 40/107 (37%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL--NTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE D+     + L  +         
Sbjct: 14  IGPAHTLRQAAALMSARRVGAAVVLDPDAGGLGILTERDVLNAVGRGLSPDAEPAHAHTT 73

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A + +       L+V+D  +   GIV   D+LR
Sbjct: 74  TDVVFAAPSWTLEEAARAMTHGGFRHLIVMDRDE-PAGIVSVRDILR 119



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 20/54 (37%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V D M      I     L  A  L+    +   +V+D     +GI+   D+L  
Sbjct: 3   VRDAMSTVVLTIGPAHTLRQAAALMSARRVGAAVVLDPDAGGLGILTERDVLNA 56


>gi|260779297|ref|ZP_05888189.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           coralliilyticus ATCC BAA-450]
 gi|260605461|gb|EEX31756.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           coralliilyticus ATCC BAA-450]
          Length = 138

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/110 (21%), Positives = 47/110 (42%), Gaps = 7/110 (6%)

Query: 234 KIGCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDV 288
           K    L  A+  ++     G   V++E +++ G ++  D+     K      +T  V D 
Sbjct: 18  KPEMSLSAALEKVMKSSYLGG-PVINEKEEVIGFLSGHDLLDKLVKVSYYCQDTHIVSDC 76

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  +   +  DT +     +++     V  V+D+  K +GI+   D+LR 
Sbjct: 77  MHPDVISVGPDTSIIELADMMQVGKPKVYPVIDN-GKLVGIITRRDVLRA 125



 Score = 44.5 bits (104), Expect = 0.026,   Method: Composition-based stats.
 Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            SD MH       V     +I+   ++   +     V+D   KL GIIT  D+ R   K+
Sbjct: 73  VSDCMHPDVIS--VGPDTSIIELADMMQVGKPKVYPVID-NGKLVGIITRRDVLRAVAKN 129

Query: 280 LNT 282
           L+ 
Sbjct: 130 LDD 132



 Score = 41.8 bits (97), Expect = 0.16,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 27/57 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + +L V D M         +  L+ A++ + + +     V+++ ++ IG +   DLL
Sbjct: 1   MESLKVRDYMTLQAVTFKPEMSLSAALEKVMKSSYLGGPVINEKEEVIGFLSGHDLL 57


>gi|218885420|ref|YP_002434741.1| signal transduction protein with CBS domains [Desulfovibrio
           vulgaris str. 'Miyazaki F']
 gi|218756374|gb|ACL07273.1| putative signal transduction protein with CBS domains
           [Desulfovibrio vulgaris str. 'Miyazaki F']
          Length = 576

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 261 QKLKGIITEGDIFRNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVL 317
           Q   GI+TE D+ R   +      +L VE  M      + ED LL   +  + +H I  L
Sbjct: 124 QHPAGILTERDVVRALARHGAGAASLPVEAAMTAALVTVREDELLFEGLSRMVRHAIRRL 183

Query: 318 MVVDDCQKAIGIVHFLDLLRFG 339
           +VV       G++   +LL  G
Sbjct: 184 VVVAADGAVRGLLEERNLLAAG 205


>gi|330007018|ref|ZP_08305850.1| SIS domain protein [Klebsiella sp. MS 92-3]
 gi|328535557|gb|EGF62012.1| SIS domain protein [Klebsiella sp. MS 92-3]
          Length = 287

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE++ +         AV  +   +  + +   G S     ++   L   G P     
Sbjct: 102 ISVLETNRRALDIEALKRAVSWLSDARQILALGMGGGSTICAQEIQYRLFRLGLPVVSQS 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T  D++IVLS  G + E+      A ++   +IAIT    + +A  AD
Sbjct: 162 DGLLVRMMSSAVTPQDVVIVLSLGGYTREIIESAAIASQYGAKVIAITP-AGTPLAEQAD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +VL L            P+TS    LA+ D LA  L  +
Sbjct: 221 LVLPLLVRENDYIFK--PSTSRYAMLAMVDVLATELAMA 257


>gi|307941856|ref|ZP_07657210.1| RpiR family transcriptional regulator [Roseibium sp. TrichSKD4]
 gi|307774953|gb|EFO34160.1| RpiR family transcriptional regulator [Roseibium sp. TrichSKD4]
          Length = 308

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/177 (19%), Positives = 71/177 (40%), Gaps = 11/177 (6%)

Query: 23  TVQCALRSIIAEKRGLSSLESSLQGELSF-QFHCAVEKIKAIKGRVVITGIGKSGHIGSK 81
           +V  AL  ++    G+     +++ ++        V  I   +  +V    G S  +  +
Sbjct: 110 SVDQALDRVLT---GIYGTTKAMRQQIDAGTLEGVVNTIVNCRQMLVAGIGGGSSMLADE 166

Query: 82  LASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPL 141
            A+     G P+   + +         +  +D++++ S SG ++ +      A+ +    
Sbjct: 167 AANRFFRLGIPTSSTNDSYVLQMRAATLGPNDVLLLFSSSGETEAIVGAAQVAQSYEANT 226

Query: 142 IAITSENKSVVAC--HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           IA+T    S +A      I + LP++P+       PT S    LA+ D LA+ +   
Sbjct: 227 IALTC-PGSKLANIVTHPIAIELPEDPDIFK----PTASRYAFLALLDTLAMMVATE 278


>gi|293573019|ref|ZP_06683961.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E980]
 gi|291606921|gb|EFF36301.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E980]
          Length = 400

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 271 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 327

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 328 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 366



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 249 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 305


>gi|312115382|ref|YP_004012978.1| XRE family transcriptional regulator [Rhodomicrobium vannielii ATCC
           17100]
 gi|311220511|gb|ADP71879.1| putative transcriptional regulator, XRE family [Rhodomicrobium
           vannielii ATCC 17100]
          Length = 332

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/128 (19%), Positives = 44/128 (34%), Gaps = 27/128 (21%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-------------------- 274
               +     I+ EK+ G + V+D    + GI+TEGD+ R                    
Sbjct: 16  PDTDIRTIAAIMMEKQIGGLPVLDSSGVVIGIVTEGDLLRLKAPDEQKIHDWRLTLLLDP 75

Query: 275 ------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                    K    L+  DVM      + +   +    ++     I  + V  +  + IG
Sbjct: 76  KTHAKPLLEKLEANLTARDVMSAPVMTVPDGAEVLEICKMFVDTGIKRVPVTRE-GRLIG 134

Query: 329 IVHFLDLL 336
           IV   D++
Sbjct: 135 IVSRSDII 142



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 24/57 (42%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +   DVM K       DT +     ++ +  I  L V+D     IGIV   DLLR  
Sbjct: 1   MQARDVMTKPVITATPDTDIRTIAAIMMEKQIGGLPVLDSSGVVIGIVTEGDLLRLK 57


>gi|256027175|ref|ZP_05441009.1| CBS domain-containing protein [Fusobacterium sp. D11]
 gi|289765153|ref|ZP_06524531.1| CBS domain-containing protein [Fusobacterium sp. D11]
 gi|289716708|gb|EFD80720.1| CBS domain-containing protein [Fusobacterium sp. D11]
          Length = 187

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + I   + DAI  L     G + VV E +KL GII+  
Sbjct: 44  GYSYNNKCTTIKVRDCMSPQNSIDIRTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 102

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P ++   ED  +  A++ L +H I  L V+  +  K
Sbjct: 103 DLLKATLNKKNIEKTPVSMIMTRMPNIVHCFEDDNIIEAIEKLIKHEIDSLPVLRKEKGK 162

Query: 326 A 326
            
Sbjct: 163 L 163



 Score = 36.0 bits (82), Expect = 9.2,   Method: Composition-based stats.
 Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 2/57 (3%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           T+ V D M      I   T +  A+  L  +++  L+VV++  K +GI+   DLL+ 
Sbjct: 53  TIKVRDCMSPQN-SIDIRTSVYDAIIHLFNYDLGTLVVVENE-KLVGIISRKDLLKA 107


>gi|330976323|gb|EGH76381.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. aptata str. DSM 50252]
          Length = 259

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLIPANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|294618444|ref|ZP_06698014.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1679]
 gi|291595285|gb|EFF26608.1| glycine betaine transport ATP-binding protein opuAA [Enterococcus
           faecium E1679]
          Length = 391

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|260558423|ref|ZP_05830619.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium C68]
 gi|260075597|gb|EEW63903.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium C68]
          Length = 391

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|58258711|ref|XP_566768.1| IMP dehydrogenase [Cryptococcus neoformans var. neoformans JEC21]
 gi|134106793|ref|XP_777938.1| hypothetical protein CNBA4070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|50260638|gb|EAL23291.1| hypothetical protein CNBA4070 [Cryptococcus neoformans var.
           neoformans B-3501A]
 gi|57222905|gb|AAW40949.1| IMP dehydrogenase, putative [Cryptococcus neoformans var.
           neoformans JEC21]
          Length = 544

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 16/172 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIAL            ++H              V    +    
Sbjct: 80  NTPFLSSPMDTVTEDRMAIALALHGGLG-----IIHHNCSAEEQAAMVRRVKKYENGFIT 134

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFHKDLNTLSV 285
                     + D + I ++  F  V + +      KL GI+T  D+            +
Sbjct: 135 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGAPNSKLLGIVTGRDV----QFQDAETPI 190

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + VM            L  A  LLR+     L +VD     + +V   DLL+
Sbjct: 191 KSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLK 242


>gi|221195810|ref|ZP_03568863.1| inosine-5'-monophosphate dehydrogenase [Atopobium rimae ATCC 49626]
 gi|221184284|gb|EEE16678.1| inosine-5'-monophosphate dehydrogenase [Atopobium rimae ATCC 49626]
          Length = 507

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 61/169 (36%), Gaps = 12/169 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIP- 231
             P  SA+MQ   G  LAIAL +    S   F       +     +       +G  +  
Sbjct: 51  NIPMVSAVMQAVSGPRLAIALAQQGGLS---FIYGSQSAEDEAQMIREVKSYKAGFVVSD 107

Query: 232 -LVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     L + + +  +     + V  +G    KL GI+T  D   +  +D  T  V +
Sbjct: 108 STLTPDMTLAEVLELKEKTGHSTMPVTADGTSYGKLVGIVTSRDYRPS--RDDITKKVAE 165

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            M          E T L  A  ++  + ++ L +VD     + +V   D
Sbjct: 166 FMTPVDEIISAPETTTLKEANDIIWNNKLNALPIVDTSGYLVSLVFRKD 214


>gi|212638696|ref|YP_002315216.1| N-terminal HTH domain arsR family and two C-terminal CBS domains
           [Anoxybacillus flavithermus WK1]
 gi|212560176|gb|ACJ33231.1| N-terminal HTH domain arsR family and two C-terminal CBS domains
           [Anoxybacillus flavithermus WK1]
          Length = 199

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 7/141 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        ++     + DAI  +  +  G + VVDE   L
Sbjct: 48  FYTGKTGTQLLADKIKKMKVSDYQSIPVVIHENMSVYDAIVTMFLEDVGTLFVVDEESLL 107

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P      +D LL    Q L +  I  + V
Sbjct: 108 VGVLSRKDLLRASIGKQELTSIPVNIIMTRMPNITFCEKDDLLIDVAQKLIEKQIDAMPV 167

Query: 320 ---VDDCQKAIGIVHFLDLLR 337
              VD   + IG +   ++ +
Sbjct: 168 VKKVDKGYEVIGRITKTNMTK 188



 Score = 45.7 bits (107), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  + V D     P VI E+  +  A+  +   ++  L VVD+    +G++   DL
Sbjct: 58  LADKIKKMKVSDYQSI-PVVIHENMSVYDAIVTMFLEDVGTLFVVDEESLLVGVLSRKDL 116

Query: 336 LRFGI 340
           LR  I
Sbjct: 117 LRASI 121


>gi|161527831|ref|YP_001581657.1| glucosamine--fructose-6-phosphate aminotransferase [Nitrosopumilus
           maritimus SCM1]
 gi|160339132|gb|ABX12219.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Nitrosopumilus maritimus SCM1]
          Length = 586

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 11/165 (6%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHAAEASH 103
            + S +   A + I+  K  + ITG G S     I  ++ S      T S          
Sbjct: 268 EKTSSEIEAATDYIRQAKN-IYITGSGTSYNSALIAKQILSKYVKIKTESIMSSE---LQ 323

Query: 104 GDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
            D  +I  + ++I +S SG S ++   +  A+  +  +IAI +   S +A  AD+V+ L 
Sbjct: 324 FDPNIIEENSILIAISQSGESADVLEAVKIAKNANCKIIAIVNLVTSSLAREADVVIGLN 383

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLES-RNFSENDFYVL 207
             PE    G+A T S   QL I   +   L  +    +  DF   
Sbjct: 384 CGPE---IGVAATKSFTSQLVILYKIVQKLSNNDITINFEDFSKS 425


>gi|71736096|ref|YP_277222.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|257485681|ref|ZP_05639722.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           tabaci ATCC 11528]
 gi|289625506|ref|ZP_06458460.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. NCPPB3681]
 gi|289649761|ref|ZP_06481104.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. 2250]
 gi|298489451|ref|ZP_07007462.1| HTH-type transcriptional regulator hexR [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|71556649|gb|AAZ35860.1| transcriptional regulator, RpiR family [Pseudomonas syringae pv.
           phaseolicola 1448A]
 gi|298156025|gb|EFH97134.1| HTH-type transcriptional regulator hexR [Pseudomonas savastanoi pv.
           savastanoi NCPPB 3335]
 gi|320321764|gb|EFW77862.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. B076]
 gi|320331514|gb|EFW87454.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330870934|gb|EGH05643.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           aesculi str. 0893_23]
 gi|330880965|gb|EGH15114.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           glycinea str. race 4]
 gi|330986940|gb|EGH85043.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           lachrymans str. M301315]
 gi|331011969|gb|EGH92025.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           tabaci ATCC 11528]
          Length = 288

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQMAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|300692864|ref|YP_003753859.1| hypothetical protein RPSI07_3251 [Ralstonia solanacearum PSI07]
 gi|299079924|emb|CBJ52601.1| conserved protein of unknown function
           (cystathionine-beta-synthase-CBS domain) [Ralstonia
           solanacearum PSI07]
          Length = 378

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 25/143 (17%), Positives = 44/143 (30%), Gaps = 13/143 (9%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                   F   +       S+  V     +  A+ +L       + V+D+  +L GI+T
Sbjct: 224 QQQAYARTFHALTCADIMTPSVVTVSAATSVPHALRLLQRHGVKALPVLDDEHRLIGIVT 283

Query: 269 EGDI------------FRNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNIS 315
             D+               F     T   V  VM      I  D  +   + +       
Sbjct: 284 RADLTGTAARARRQRLRDWFAIGAMTPPRVGGVMTPRVLTIRADAPMADLVPMFASAGHH 343

Query: 316 VLMVVDDCQKAIGIVHFLDLLRF 338
            + VVD   +  GI+   D++  
Sbjct: 344 HIPVVDAHGRLAGILTQADIIHA 366



 Score = 39.5 bits (91), Expect = 0.79,   Method: Composition-based stats.
 Identities = 11/46 (23%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ DI    ++
Sbjct: 324 IRADAPMADLVPMFASAGHHHIPVVDAHGRLAGILTQADIIHALYR 369


>gi|229547762|ref|ZP_04436487.1| RpiR family transcriptional regulator protein [Enterococcus
           faecalis TX1322]
 gi|307292490|ref|ZP_07572340.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|229307106|gb|EEN73093.1| RpiR family transcriptional regulator protein [Enterococcus
           faecalis TX1322]
 gi|306496463|gb|EFM66030.1| SIS domain protein [Enterococcus faecalis TX0411]
 gi|315028390|gb|EFT40322.1| SIS domain protein [Enterococcus faecalis TX4000]
          Length = 189

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 11/184 (5%)

Query: 15  GHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAIKGRVV 68
           G S +K +  + A ++   E        +++ L    Q         A++ I   +  V 
Sbjct: 5   GFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQAR-HVA 63

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
            TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG ++E+ 
Sbjct: 64  FTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGETNEMI 121

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIG 186
             +   +     +++IT+   S +A  AD  ++  +P E          TT+ I  +A+ 
Sbjct: 122 KQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALI 181

Query: 187 DALA 190
           + LA
Sbjct: 182 ELLA 185


>gi|222151708|ref|YP_002560864.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Macrococcus caseolyticus JCSC5402]
 gi|222120833|dbj|BAH18168.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Macrococcus caseolyticus JCSC5402]
          Length = 376

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 49/122 (40%), Gaps = 3/122 (2%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   V  +      V     + +AI I+ E+R   + + D    L G +   D+  
Sbjct: 243 QTTPNVKTVDEAMVKPISVTAEKSIGEAIQIMRERRVDTLLITDNDNVLVGYVDIEDLSE 302

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              K   +LS+  +M  N   +     L   ++ + + NI ++ V+D   + +G++   +
Sbjct: 303 AAKK---SLSLSRIMNHNVYFVRSGVYLQDTVRTILKRNIRLIPVLDKHDRLLGVITRAN 359

Query: 335 LL 336
           L+
Sbjct: 360 LV 361



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +V++ M+K P  +  +  +  A+Q++R+  +  L++ D+    +G V   
Sbjct: 240 RLIQTTPNVKTVDEAMVK-PISVTAEKSIGEAIQIMRERRVDTLLITDNDNVLVGYVDIE 298

Query: 334 DLLRF 338
           DL   
Sbjct: 299 DLSEA 303


>gi|78187838|ref|YP_375881.1| CBS [Chlorobium luteolum DSM 273]
 gi|78167740|gb|ABB24838.1| CBS protein [Chlorobium luteolum DSM 273]
          Length = 148

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 51/121 (42%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIF-------RNFH 277
                 ++K  C + +A+ I+ +     + V         G+ITE DI         + H
Sbjct: 16  MQKDFAMIKGSCTVAEALQIMKKSGESGLIVEPRNEDDCYGVITEKDILGKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    +     +  A++++++ N+  L V+D     +G+++  D+L 
Sbjct: 76  RDPWNTPVFQIMSKPVISVNPSLRIKYALRMMKRTNVRRLTVMD-GNAVVGVLNMTDVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135


>gi|331005713|ref|ZP_08329075.1| CBS domain protein [gamma proteobacterium IMCC1989]
 gi|330420466|gb|EGG94770.1| CBS domain protein [gamma proteobacterium IMCC1989]
          Length = 141

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 47/118 (39%), Gaps = 5/118 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL- 283
           +   +   +     + +A+T++ ++      VVD+  +L G ++E D  ++   D     
Sbjct: 9   YMDHNPHAIHATTSIKEAVTMMLKEGVIGAPVVDKNNQLIGYLSEQDCVKDMLNDAFYSE 68

Query: 284 ---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               V   M      +  +T +    Q +  +      VV D  K +G++   D+LR 
Sbjct: 69  EPGPVSSAMQTEVVSVTPETSIVEIAQTIMTNRPKNYPVVTD-GKLVGLISRSDVLRA 125



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 28/58 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++++ V D M  NP  I   T +  A+ ++ +  +    VVD   + IG +   D ++
Sbjct: 1   MHSILVTDYMDHNPHAIHATTSIKEAVTMMLKEGVIGAPVVDKNNQLIGYLSEQDCVK 58


>gi|298373787|ref|ZP_06983776.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Bacteroidetes oral taxon 274 str. F0058]
 gi|298274839|gb|EFI16391.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Bacteroidetes oral taxon 274 str. F0058]
          Length = 614

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/173 (21%), Positives = 75/173 (43%), Gaps = 14/173 (8%)

Query: 38  LSSLESSLQGELSFQFHCAV----EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTG 90
           ++ ++  +  +L+     A+    + +     R+VI   G S H   IG  L  T     
Sbjct: 269 INCMKGRVNVDLNDVKLAAIIDNKQTLLNA-NRIVILACGTSWHSGLIGKYLIETFCK-- 325

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
            P    +A+E  + +  +I+ +D++I +S SG + +  A +  AR     +  I +   S
Sbjct: 326 IPVDVEYASEFRYRNS-VISPNDVVIAISQSGETADTLAAIELAREKGAFVYGICNAVGS 384

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            +         +   PE    G+A T +   Q+ +    A+AL +++N  E+D
Sbjct: 385 SIPRVTHTGSYIHVGPE---IGVASTKAFTGQVTVLTMFALALAKAKNIIEHD 434


>gi|261207139|ref|ZP_05921828.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium TC 6]
 gi|289565260|ref|ZP_06445711.1| osmotically activated L-carnitine/choline ABC transporter,
           ATP-binding protein OpuCA [Enterococcus faecium D344SRF]
 gi|260078767|gb|EEW66469.1| glycine betaine/L-proline transport ATP-binding subunit
           [Enterococcus faecium TC 6]
 gi|289162916|gb|EFD10765.1| osmotically activated L-carnitine/choline ABC transporter,
           ATP-binding protein OpuCA [Enterococcus faecium D344SRF]
          Length = 391

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/99 (27%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKESAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|256392266|ref|YP_003113830.1| signal transduction protein with CBS domains [Catenulispora
           acidiphila DSM 44928]
 gi|256358492|gb|ACU71989.1| putative signal transduction protein with CBS domains
           [Catenulispora acidiphila DSM 44928]
          Length = 145

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI---FRNFHKDLNTLSVEDVM 289
           V     L+    ++ ++  GCV VVD+  +L G++T+ D+         D       ++M
Sbjct: 15  VLESDNLVHVARVMRDEDVGCVPVVDDTGRLVGMLTDRDLVVEAMAASDDPTLRQAGELM 74

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +   +  D  +T  ++ + +  +  L VV    K +G+V   DL +
Sbjct: 75  RGDIHSVDADAPVTHVVETMGRQRVRRLPVV-AAGKLVGVVGVADLAK 121



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 31/53 (58%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V DVM + PK +LE   L    +++R  ++  + VVDD  + +G++   DL+
Sbjct: 3   TVRDVMTEAPKSVLESDNLVHVARVMRDEDVGCVPVVDDTGRLVGMLTDRDLV 55


>gi|328469135|gb|EGF40083.1| hypothetical protein LM220_11457 [Listeria monocytogenes 220]
          Length = 206

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/92 (26%), Positives = 43/92 (46%), Gaps = 1/92 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +    V+ I+  K RV I G+G SG    +++  L   G     V+          + T
Sbjct: 107 AKIREVVQYIQEAK-RVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIITSSITT 165

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLI 142
           ++D +I +S SG++ EL   L  A++  + L+
Sbjct: 166 KEDFVIGISNSGNTPELVTALKIAKKTKVKLL 197


>gi|307822007|ref|ZP_07652239.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylobacter tundripaludum SV96]
 gi|307736573|gb|EFO07418.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Methylobacter tundripaludum SV96]
          Length = 845

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 21/110 (19%), Positives = 43/110 (39%), Gaps = 1/110 (0%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P+++    +  A  ++       + V    +   GI+TE D+ +     +    V 
Sbjct: 145 KPIPPMIQSTQNMAQASKLMHSSHSDAIRVEFPDES-VGILTERDVVKALASLMLNPIVA 203

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D    +   + E   L  A +++  +    L V D+    IGI++  D+L
Sbjct: 204 DHASSDLVTVNEHESLYHAKKIMLLNGFRHLGVSDNKDNLIGIINLTDIL 253



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFR 274
             +   D+  +     L      + DA   + E+    + + VD+   + GI TE D+ +
Sbjct: 7   HAISIKDITQTRLLTCL--PNETMHDAAVKMVERNCSAILIAVDDE--IIGIWTERDVLK 62

Query: 275 N--FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                 D  +  V + M      + E+  L       ++  +   +V+DD  K  GI+  
Sbjct: 63  FDFSSPDARSTPVSEGMSSPVICVNENASLEEVSLKFKKDGVRHYVVIDDHGKQRGIISQ 122

Query: 333 LDLLRF 338
            D+++ 
Sbjct: 123 TDVIKK 128



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 22/115 (19%), Positives = 48/115 (41%), Gaps = 3/115 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTL 283
               +  V     L +      +       V+D+  K +GII++ D+ +  NF   L   
Sbjct: 79  MSSPVICVNENASLEEVSLKFKKDGVRHYVVIDDHGKQRGIISQTDVIKKHNFEFFLVLK 138

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   V+   P +I     +  A +L+   + S  + V+   +++GI+   D+++ 
Sbjct: 139 TAGSVLKPIPPMIQSTQNMAQASKLMHSSH-SDAIRVEFPDESVGILTERDVVKA 192



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV-LMVVDDCQKAIGIVHFLDLLR 337
           DL+ +S++D+        L +  +  A   + + N S  L+ VDD    IGI    D+L+
Sbjct: 5   DLHAISIKDITQTRLLTCLPNETMHDAAVKMVERNCSAILIAVDDE--IIGIWTERDVLK 62

Query: 338 F 338
           F
Sbjct: 63  F 63


>gi|296875450|ref|ZP_06899523.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus parasanguinis ATCC 15912]
 gi|296433517|gb|EFH19291.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus parasanguinis ATCC 15912]
          Length = 279

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 43/219 (19%), Positives = 77/219 (35%), Gaps = 10/219 (4%)

Query: 4   YFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI 63
           +  HF   T+    + ++  +     S++     +S++  SL      Q     E I   
Sbjct: 70  FVYHFNEETKNQKQVQEHDELTL---SVLQRYHHISNVTESLVK--DSQLDRVAELIDQA 124

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
             RV   GIG SG +  ++       G     +   +       ++    L+I  S SGS
Sbjct: 125 D-RVYFFGIGSSGLVAREMKLRFMRLGVVCEALTDQDGFTWTTSILDSSCLVIGFSLSGS 183

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQL 183
           ++ +   L  A+      + +T+      A H      LP  P      +   ++ +  L
Sbjct: 184 TNSITDSLLDAKEKGAKTVLVTANPA---AIHQGFTEVLPAAPLPSSTYIDRISAILPLL 240

Query: 184 AIGDAL-AIALLESRNFSENDFYVLHPGGKLGTLFVCAS 221
            + D + A  L +SR   E  F       KL +     S
Sbjct: 241 IVVDLIYAHFLNKSREQKEIVFNSYWENKKLSSQRSRKS 279


>gi|282855766|ref|ZP_06265072.1| inosine-5'-monophosphate dehydrogenase (impdehydrogenase) (impdh)
           (impd) [Pyramidobacter piscolens W5455]
 gi|282586398|gb|EFB91660.1| inosine-5'-monophosphate dehydrogenase (impdehydrogenase) (impdh)
           (impd) [Pyramidobacter piscolens W5455]
          Length = 501

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/161 (19%), Positives = 56/161 (34%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D + IAL ++    F      +      +  +    +  + S  + 
Sbjct: 51  SIPMVSAIMQSVSNDTMGIALAKAGGVSFIYGSQSIESEAAMVAKVKSHKAGFVPSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             V+    L D + +  +     VAV D+     KL GI++  D      +      V  
Sbjct: 110 --VRPDATLADILALKEKTGHSTVAVTDDGTANGKLVGIVSSRDYR--VSRMDPADKVSG 165

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M          + T L+ A  ++    ++ L +V    + 
Sbjct: 166 FMTPLARLITAPDGTSLSEANDIIWDKKLNSLPIVAKDGRL 206


>gi|152973265|ref|YP_001338411.1| transcriptional regulator [Klebsiella pneumoniae subsp. pneumoniae
           MGH 78578]
 gi|238892931|ref|YP_002917665.1| putative transcriptional regulator [Klebsiella pneumoniae
           NTUH-K2044]
 gi|150958114|gb|ABR80144.1| putative transcriptional regulator (N-terminal); putative
           sugar-binding domain of regulator protein (C-terminal)
           [Klebsiella pneumoniae subsp. pneumoniae MGH 78578]
 gi|238545247|dbj|BAH61598.1| putative transcriptional regulator [Klebsiella pneumoniae subsp.
           pneumoniae NTUH-K2044]
          Length = 287

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE++ +         AV  +   +  + +   G S     ++   L   G P     
Sbjct: 102 ISVLETNRRALDIEALKRAVSWLSDARQILALGMGGGSTICAQEIQYRLFRLGLPVVSQS 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T  D++IVLS  G + E+      A ++   +IAIT    + +A  AD
Sbjct: 162 DGLLVRMMSSAVTPQDVVIVLSLGGYTREIIESAAIASQYGAKVIAITP-AGTPLAEQAD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +VL L            P+TS    LA+ D LA  L  +
Sbjct: 221 LVLPLLVRENDYIFK--PSTSRYAMLAMVDVLATELAMA 257


>gi|88602201|ref|YP_502379.1| sugar isomerase (SIS) [Methanospirillum hungatei JF-1]
 gi|88187663|gb|ABD40660.1| 3-hexulose-6-phosphate isomerase [Methanospirillum hungatei JF-1]
          Length = 190

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 9/133 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++++   +  E    F   ++++   K R+ + G G+SG +    A  L   G  S+ V 
Sbjct: 8   INAIADHISDEEVSHF---IKELLDAK-RIYVMGAGRSGLVAKAFAMRLMHLGMMSYVVG 63

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +   DLI+VLS SG +  +  I+  A+     +  ITS   S +   +D
Sbjct: 64  ETITP-----ALQTGDLIVVLSGSGKTRTIVEIVQTAKEIGGRISLITSNPDSPIGKISD 118

Query: 158 IVLTLPKEPESCP 170
             + +    +S P
Sbjct: 119 TKVIIENYRDSIP 131


>gi|29374932|ref|NP_814085.1| phosphosugar-binding transcriptional regulator, putative
           [Enterococcus faecalis V583]
 gi|227553718|ref|ZP_03983767.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229548276|ref|ZP_04437001.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
 gi|256617274|ref|ZP_05474120.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256959560|ref|ZP_05563731.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|257080765|ref|ZP_05575126.1| transcriptional regulator [Enterococcus faecalis E1Sol]
 gi|29342390|gb|AAO80156.1| phosphosugar-binding transcriptional regulator, putative
           [Enterococcus faecalis V583]
 gi|227177100|gb|EEI58072.1| RpiR family transcriptional regulator [Enterococcus faecalis HH22]
 gi|229306492|gb|EEN72488.1| RpiR family transcriptional regulator [Enterococcus faecalis ATCC
           29200]
 gi|256596801|gb|EEU15977.1| transcriptional regulator [Enterococcus faecalis ATCC 4200]
 gi|256950056|gb|EEU66688.1| transcriptional regulator [Enterococcus faecalis Merz96]
 gi|256988795|gb|EEU76097.1| transcriptional regulator [Enterococcus faecalis E1Sol]
          Length = 253

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAI 63
            +   G S +K +  + A ++   E        +++ L    Q         A++ I   
Sbjct: 53  KMGYAGFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQA 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 113 R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 169

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 170 TNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 229

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 230 VIALIELLA 238


>gi|20093896|ref|NP_613743.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19886837|gb|AAM01673.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 212

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 4/103 (3%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           P VK    L  A+  L+        VV+   +L G++T  DI R         +VE+V  
Sbjct: 12  PRVKPEDSLEQAVRELTRYSEYTAVVVNGSDRLVGLVTSNDIARGLTAGAE--TVEEVC- 68

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           ++P+ I     +T A+++L   +++++  +++  + +G+V   
Sbjct: 69  RSPESISPSDPITKAVEILTDSDLTLVP-LEEDMRVVGVVTLR 110


>gi|134295527|ref|YP_001119262.1| XRE family transcriptional regulator [Burkholderia vietnamiensis
           G4]
 gi|134138684|gb|ABO54427.1| putative transcriptional regulator, XRE family [Burkholderia
           vietnamiensis G4]
          Length = 151

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L G++T  +I +  H +   +  + V  VM
Sbjct: 17  VTPDKPLREAVDTMAEHDIGSL-VVMEYGDLVGMLTFREIIQRLHVNGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 9/43 (20%), Positives = 24/43 (55%), Gaps = 1/43 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  D  L  A+  + +H+I  L+V+ +    +G++ F ++++
Sbjct: 16  TVTPDKPLREAVDTMAEHDIGSLVVM-EYGDLVGMLTFREIIQ 57


>gi|229543822|ref|ZP_04432881.1| CBS domain containing protein [Bacillus coagulans 36D1]
 gi|229324961|gb|EEN90637.1| CBS domain containing protein [Bacillus coagulans 36D1]
          Length = 213

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 7/116 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVED 287
             +V     + DAI  +  +  G + VVD    L G+++  D+ R    +KDL+ L V  
Sbjct: 90  PVVVNENMSVYDAIVTVFLEDVGTLYVVDNASHLIGVLSRKDLLRASLGNKDLSALPVHI 149

Query: 288 VMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLRF 338
           +M + P      +D LL    + L +  I  + VV + +   +  G +   ++ + 
Sbjct: 150 IMTRMPNITCCKKDDLLIDVAKKLIEKQIDSVPVVKETESGLEVTGRITKTNITKA 205


>gi|225866648|ref|YP_002752026.1| acetoin utilization protein AcuB [Bacillus cereus 03BB102]
 gi|225790486|gb|ACO30703.1| acetoin utilization protein AcuB [Bacillus cereus 03BB102]
          Length = 214

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRMKGIRHIPIVDQNNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRMKGIRHIPIVDQNNHVVGIISDRD 52


>gi|17544849|ref|NP_518251.1| hypothetical protein RSc0130 [Ralstonia solanacearum GMI1000]
 gi|17427138|emb|CAD13658.1| putative cbs-domain-containing membrane transmembrane protein
           [Ralstonia solanacearum GMI1000]
          Length = 378

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/159 (16%), Positives = 51/159 (32%), Gaps = 16/159 (10%)

Query: 196 SRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLV---KIGCPLIDAITILSEKRFG 252
             +    D   L    +          +  +    P V        +  A+ +L      
Sbjct: 208 WLDIDPEDLTALLQEMQQQAYARTFHTLTCADIMTPSVVTASAATSVPHALRLLQRHGVK 267

Query: 253 CVAVVDEGQKLKGIITEGDIF-------RNFHKDLNTL------SVEDVMIKNPKVILED 299
            + V+D+G++L GI+T  D+        R   +D   +       V  VM      I  D
Sbjct: 268 ALPVIDDGRRLIGIVTRADLAGTAPRAPRQRLRDWFAIGAMTPPRVRGVMNPRVLTIRAD 327

Query: 300 TLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +   + +        + VVD   +  GI+   D++  
Sbjct: 328 APMADLVPMFASAGHHHIPVVDAHGRLAGILTQADVIHA 366



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 10/46 (21%), Positives = 23/46 (50%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
           ++   P+ D + + +      + VVD   +L GI+T+ D+    ++
Sbjct: 324 IRADAPMADLVPMFASAGHHHIPVVDAHGRLAGILTQADVIHALYR 369


>gi|229551290|ref|ZP_04440015.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|258540955|ref|YP_003175454.1| transcriptional regulator RpiR family [Lactobacillus rhamnosus Lc
           705]
 gi|229315249|gb|EEN81222.1| transcriptional regulator [Lactobacillus rhamnosus LMS2-1]
 gi|257152631|emb|CAR91603.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus Lc
           705]
          Length = 315

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 62/159 (38%), Gaps = 3/159 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++++              A+  ++  +  + + G+  S  +   L   L   G  + F 
Sbjct: 104 AIAAVRDLPDELDQAAVQEAITTLRHAR-HIYLVGMSASALVAQDLYLKLIRAGYLAIFD 162

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             A  +   +   T  D ++V S+SG + E+      ARR   P+IA+T    S +   A
Sbjct: 163 ADAHTALERVYYTTAADAVVVFSYSGLTKEVVLAAQQARRNQTPVIAVTRAEPSPLRDAA 222

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             V+ LP  P      +   TS   +  + + L + ++ 
Sbjct: 223 SCVIALP--PTEPLLRIGAVTSMFTETYVANILFLGVVH 259


>gi|309389657|gb|ADO77537.1| transcriptional regulator, RpiR family [Halanaerobium praevalens
           DSM 2228]
          Length = 267

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 32/145 (22%), Positives = 63/145 (43%), Gaps = 3/145 (2%)

Query: 56  AVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
            V+KIK+ + ++ I GIG SG    ++   L   G     +  +     +  +I+ +DL+
Sbjct: 112 LVDKIKSAE-KIYIYGIGSSGLTADEMRLRLLRMGFHVSSITDSHLMKINSAIISENDLV 170

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S SG + E+   L  A++     + ITS   +  A +A+  L       +       
Sbjct: 171 IAISISGQTKEIVESLKIAQKNKAKTLLITSFENTEAAKYAN--LEALIYNIAFVDQQRF 228

Query: 176 TTSAIMQLAIGDALAIALLESRNFS 200
             S    + + D +   LL+ ++ +
Sbjct: 229 INSQFSVVYLLDIICTVLLQDKDIN 253


>gi|297617065|ref|YP_003702224.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family [Syntrophothermus lipocalidus DSM 12680]
 gi|297144902|gb|ADI01659.1| PAS modulated sigma54 specific transcriptional regulator, Fis
           family [Syntrophothermus lipocalidus DSM 12680]
          Length = 697

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 50/115 (43%), Gaps = 8/115 (6%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
               + +++    + +   +LSE     + VVDE  +L G++++ D+ + F K L+    
Sbjct: 7   MTTDLVVIRPEQTIREVAGVLSEPSIDSLPVVDEAGRLLGLVSKSDVLKAFTKSLDPNTP 66

Query: 285 VEDVMIKN-PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M  N  KV   +  +           IS L VV    K +G+    +L R 
Sbjct: 67  VSEIMTGNEVKVAHPEDAVEE-----DSAEISCLPVVYKE-KLVGVCTRSNLTRA 115



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 30/56 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+DVM  +  VI  +  +     +L + +I  L VVD+  + +G+V   D+L+ 
Sbjct: 1   MRVKDVMTTDLVVIRPEQTIREVAGVLSEPSIDSLPVVDEAGRLLGLVSKSDVLKA 56


>gi|284051624|ref|ZP_06381834.1| signal transduction histidine kinase [Arthrospira platensis str.
           Paraca]
 gi|291570875|dbj|BAI93147.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 1049

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 34/152 (22%), Positives = 59/152 (38%), Gaps = 31/152 (20%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKR-----------FGCVAVVDEGQ 261
                   +D++H       V     L++ + ++S++              CV VV E  
Sbjct: 9   WLMSSPTLNDIIHRDPLA--VVPNTSLMEVMALMSQEPSDQWGTENFPPNSCVLVV-EDG 65

Query: 262 KLKGIITEGDIFRNFHKDLN--TLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVL 317
           KL G+ TE D+ +      N   L V +VM + P V+ E  +  +   +Q L+ H I  +
Sbjct: 66  KLVGMWTERDVVQLIGAGENPGDLVVSEVMRQPPVVLREADELDIYAIIQKLKTHKIHYI 125

Query: 318 MVVDDCQKAIGIV-------------HFLDLL 336
            V+D+     GI+                D+L
Sbjct: 126 PVLDEKDYLTGIIPEYRVIEKLFDSHTNHDIL 157


>gi|257420636|ref|ZP_05597626.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
 gi|257162460|gb|EEU92420.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis X98]
          Length = 229

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAI 63
            +   G S +K +  + A ++   E        +++ L    Q         A++ I   
Sbjct: 39  KMGYAGFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQA 98

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 99  R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 155

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 156 TNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 215

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 216 VIALIELLA 224


>gi|229818652|ref|YP_002880178.1| RpiR family transcriptional regulator [Beutenbergia cavernae DSM
           12333]
 gi|229564565|gb|ACQ78416.1| transcriptional regulator, RpiR family [Beutenbergia cavernae DSM
           12333]
          Length = 299

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 38/180 (21%), Positives = 73/180 (40%), Gaps = 7/180 (3%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK 74
           G S    +     +  ++     + +L  +++         +V+ + +  GR+ + GIG 
Sbjct: 100 GSSADPQNPADVVVDELLT--ANVRALTETVRTLDRAALAASVDALASA-GRIDLYGIGG 156

Query: 75  SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYA 134
           SG + + L       G  +     +  +     M+   D+ I LS +G + E+ A L  A
Sbjct: 157 SGTVAADLQRRFHRIGRVAHAWSESHDALTGAAMLGASDVAIALSHTGETSEVAAALALA 216

Query: 135 RRFSIPLIAITSENKS-VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           R      IA+T+   S V A    +++T   E  +   GLA       Q+ + D L + +
Sbjct: 217 RDRGATTIAVTNYPGSAVAAAADLVLVTAAHEERARADGLA---GRHAQMFVVDCLYVLV 273


>gi|24374034|ref|NP_718077.1| DNA-binding transcriptional regulator HexR [Shewanella oneidensis
           MR-1]
 gi|24348504|gb|AAN55521.1|AE015690_9 transcriptional regulator, RpiR family [Shewanella oneidensis MR-1]
          Length = 284

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDVAAINKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIEIARLARENGAAVIGITAR-NSPLSMEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL   D LA      R     D
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRGPRFRD 264


>gi|116749781|ref|YP_846468.1| Cl- channel, voltage-gated family protein [Syntrophobacter
           fumaroxidans MPOB]
 gi|116698845|gb|ABK18033.1| Cl- channel, voltage-gated family protein [Syntrophobacter
           fumaroxidans MPOB]
          Length = 612

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 24/125 (19%), Positives = 45/125 (36%), Gaps = 3/125 (2%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
             +   DV      + ++           +L+  R     VVD+   L GI+   D+   
Sbjct: 478 QTMRVKDVFRRDVPVTVLPEDMTFGQLRRLLTRTRESFFPVVDDKWGLCGILAVRDLREV 537

Query: 276 FHKD--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
             +    + L V ++  + P  +  +  L  AM L  Q     + +VD      G++   
Sbjct: 538 IFEQHVQDLLVVGELASR-PVSVEPEDNLYDAMLLFLQTGYGQIPIVDGQAGLAGLLRLQ 596

Query: 334 DLLRF 338
           DL+  
Sbjct: 597 DLMEA 601


>gi|78043601|ref|YP_359302.1| CBS domain-containing protein [Carboxydothermus hydrogenoformans
           Z-2901]
 gi|77995716|gb|ABB14615.1| CBS domain protein [Carboxydothermus hydrogenoformans Z-2901]
          Length = 213

 Score = 65.7 bits (159), Expect = 9e-09,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 52/128 (40%), Gaps = 11/128 (8%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKD 279
            V        +V+    + DAI  +  +  G + VV E   L+G+ +  D+ +     KD
Sbjct: 79  RVQEVQSRPIVVRETSTVYDAIVTMFIEDVGTIFVVSEEGFLEGLASRKDMLKATMGGKD 138

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVD-------DCQKAIGIV 330
           +N L V  VM + P   V   D  +  A + L  H +  L VV+       +  + +G  
Sbjct: 139 INKLPVGVVMTRMPNIIVTYPDESVLRAAEKLIHHQVDSLPVVETVLHEGREKYRVVGRF 198

Query: 331 HFLDLLRF 338
              ++ R 
Sbjct: 199 TKTNITRL 206


>gi|332662906|ref|YP_004445694.1| CBS domain-containing protein [Haliscomenobacter hydrossis DSM
           1100]
 gi|332331720|gb|AEE48821.1| CBS domain containing protein [Haliscomenobacter hydrossis DSM
           1100]
          Length = 135

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/116 (20%), Positives = 47/116 (40%), Gaps = 6/116 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFHKDLNTL 283
               + +        + + ++++     + +  EG K  + GI+TE D+      +L   
Sbjct: 8   MSSLVVVANAQSTFDNLMQLMTQYNISAIPITHEGAKQAIIGIVTELDLRNWKDTNL--- 64

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLLRF 338
           +   +M      I  D     A  L+ ++ I  L+V D      IGI+  +DLL+ 
Sbjct: 65  TAMSLMSTRLCYINGDDSAANAANLMLKNRIHHLLVKDKKHDTLIGILSSVDLLKL 120


>gi|308174661|ref|YP_003921366.1| acetoin degradation regulation pathway protein [Bacillus
           amyloliquefaciens DSM 7]
 gi|307607525|emb|CBI43896.1| component of the acetoin degradation regulation pathway [Bacillus
           amyloliquefaciens DSM 7]
          Length = 215

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-----FHKD- 279
               +  V     +  A+  +       + V DE   + GI+T+ DI +      F ++ 
Sbjct: 7   MKRDVITVTKNDSIETAVRKMKAYHIRHLPVTDEDLHVAGIVTDRDIKQAGPDSSFEQED 66

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                T  VE +M +N         +        +H I  L +     K  GI+   D+L
Sbjct: 67  RGAFLTNKVETIMKRNVICAHPLDFVEEISASFYEHGIGCLPIT-VNNKLTGILTKTDVL 125

Query: 337 R 337
           R
Sbjct: 126 R 126



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            E +M ++   + ++  +  A++ ++ ++I  L V D+     GIV   D+ + G
Sbjct: 3   AEQIMKRDVITVTKNDSIETAVRKMKAYHIRHLPVTDEDLHVAGIVTDRDIKQAG 57


>gi|295700112|ref|YP_003608005.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
 gi|295439325|gb|ADG18494.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1002]
          Length = 388

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/62 (35%), Positives = 32/62 (51%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F +  + L  EDVM ++   +   T    A +L R+HN+  L VVD  QK +GIV   D
Sbjct: 232 AFSRSFDELRCEDVMSRHVVSVSPGTRAAAAWELFRRHNVKALPVVDVKQKLLGIVTRAD 291

Query: 335 LL 336
            +
Sbjct: 292 FV 293



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 45/128 (35%), Gaps = 17/128 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHK----- 278
               +  V  G     A  +        + VVD  QKL GI+T  D    ++F       
Sbjct: 246 MSRHVVSVSPGTRAAAAWELFRRHNVKALPVVDVKQKLLGIVTRADFVDRKSFGALGPIL 305

Query: 279 ----------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                      L T +V  +M      +     +T  + +   +    + V+D   + +G
Sbjct: 306 NYFDGWLRGDALRTSNVGSLMTTEVCTVAASDPITELVPMFANYGHHHVPVLDRVGRVVG 365

Query: 329 IVHFLDLL 336
           ++  +DL+
Sbjct: 366 MITQVDLI 373


>gi|240170638|ref|ZP_04749297.1| hypothetical protein MkanA1_15090 [Mycobacterium kansasii ATCC
           12478]
          Length = 143

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/115 (18%), Positives = 49/115 (42%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
               +  +     L  A   + E   G + +  +  +L G++T+ DI         D NT
Sbjct: 8   MNAGVTCIGEHETLSAAAQHMREHDIGVLPICGDDDRLHGMLTDRDIVIKGIATGLDPNT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +   ++  +   +  +  ++  + ++ +H +  L VV++  + +GIV   D+ R
Sbjct: 68  TTAGQLVHDHTYYVDVNASISEMLNVMEEHQVRRLPVVEE-HRLVGIVTEADIAR 121



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 18/58 (31%), Positives = 29/58 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  DVM      I E   L+ A Q +R+H+I VL +  D  +  G++   D++  GI
Sbjct: 2   TTARDVMNAGVTCIGEHETLSAAAQHMREHDIGVLPICGDDDRLHGMLTDRDIVIKGI 59



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 30/63 (47%), Gaps = 1/63 (1%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            D    V +   + + + ++ E +   + VV+E  +L GI+TE DI R+  +      V+
Sbjct: 75  HDHTYYVDVNASISEMLNVMEEHQVRRLPVVEEH-RLVGIVTEADIARHLPEHSIAQFVK 133

Query: 287 DVM 289
            + 
Sbjct: 134 AIC 136


>gi|239827756|ref|YP_002950380.1| hypothetical protein GWCH70_2418 [Geobacillus sp. WCH70]
 gi|239808049|gb|ACS25114.1| CBS domain containing protein [Geobacillus sp. WCH70]
          Length = 209

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        +V     + DAI  +  +  G + V+D+   L
Sbjct: 58  FYTGKTGSQLLADKIKKIKVGDYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVIDDESLL 117

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L T+ V  +M + P   V  +D  L    + L +  I  + V
Sbjct: 118 VGVLSRKDLLRASIGKQELTTIPVNIIMTRMPNIAVCYKDDPLIEVAEQLIEKQIDAMPV 177

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V   +K    IG +   ++ + 
Sbjct: 178 VRKTEKGYEVIGRITKTNMTKA 199



 Score = 42.6 bits (99), Expect = 0.078,   Method: Composition-based stats.
 Identities = 16/65 (24%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  + V D     P V+ E+  +  A+  +   ++  L V+DD    +G++   DL
Sbjct: 68  LADKIKKIKVGDYQSI-PVVVNENVSVYDAIVTMFLEDVGTLFVIDDESLLVGVLSRKDL 126

Query: 336 LRFGI 340
           LR  I
Sbjct: 127 LRASI 131


>gi|152979863|ref|YP_001353277.1| signal transduction protein [Janthinobacterium sp. Marseille]
 gi|151279940|gb|ABR88350.1| signal transduction protein [Janthinobacterium sp. Marseille]
          Length = 394

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/233 (16%), Positives = 80/233 (34%), Gaps = 24/233 (10%)

Query: 130 ILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           I+  A   ++ LI     N +    +    L      +      APT    +  A  DA+
Sbjct: 149 IIPVALNSALLLITALFYNNATGRRYPHRPLPPDTANKHNTSDAAPTERIGIAPADLDAV 208

Query: 190 AIALLESRNFSENDF-YVLHPGGKLGTLFVCASDVMHSGDSIPLVKI--GCPLIDAITIL 246
                +  + S +D   ++               V  +  S  +V    G  L DA T+L
Sbjct: 209 LTRYNQVLDISRDDLEAIMLQTEMQAYRRRLGETVCAAVMSKDVVTAEFGTTLADAWTLL 268

Query: 247 SEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLS-------------V 285
            +     + V+D G+ + GI+T+ D  ++          + L  L              V
Sbjct: 269 KQHDLTALPVIDRGRHVIGIVTKADFLKHAEIEPHDGLAERLKHLITPSMLSHTEKHEVV 328

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +M         +  +   + L+    +  + V+D+  + +G++   D++  
Sbjct: 329 GQIMTTEVMTADANQSILDLVPLMSDSELHQVPVIDERGRLVGMISQTDMIAA 381


>gi|116492280|ref|YP_804015.1| glucosamine--fructose-6-phosphate aminotransferase [Pediococcus
           pentosaceus ATCC 25745]
 gi|116102430|gb|ABJ67573.1| glutamine--fructose-6-phosphate transaminase [Pediococcus
           pentosaceus ATCC 25745]
          Length = 605

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 67/317 (21%), Positives = 122/317 (38%), Gaps = 56/317 (17%)

Query: 42  ESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHA 98
              L    +  F  A+        ++ I G G S   G +G KL      T TP+  V A
Sbjct: 270 AKYLDHAGNIHFDQALLDQINQASKLYIVGAGTSYHAGLVGKKLFEKF--TKTPTEVVLA 327

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKA-ILYYARRFSIPLIAITSENKSVVACHAD 157
           +E ++ D  +I      I LS SG + + +  ++     +  P + IT+   S +A  AD
Sbjct: 328 SEFAYDD-PIIEDQAFFIFLSQSGETADSRQVLVRVNDEWQKPSLTITNVANSTLAREAD 386

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR-NFSENDFYVLHPGGKLGTL 216
              TL   PE     +A T +   Q+A+   LA+A+   + N +  +F +     K+   
Sbjct: 387 FSATLEAGPEIA---VASTKAYTAQIAVEALLAVAMGREKTNATAVNFDITGQLSKVANA 443

Query: 217 FVCASDVMHSGDSIPL-------------------VKIGCPLIDAITILS---------- 247
                D     + + L                   V +   L   +  +S          
Sbjct: 444 IQTVVDEKGKIEELALATLRKTRNAFYIGRGLDYNVALESSLK--LKEISYIQAEGFASG 501

Query: 248 EKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVA 305
           E + G +A++++G  + GIIT     ++   D    ++++V+ +  N   ++ + L    
Sbjct: 502 ELKHGTIALIEDGTPVIGIIT-----QSKTADHTRSNLQEVLSRGANVITMVSEDLANST 556

Query: 306 MQLLRQHNISVLMVVDD 322
             +L       L VVD+
Sbjct: 557 DDIL-------LPVVDE 566


>gi|317495670|ref|ZP_07954036.1| CBS domain pair [Gemella moribillum M424]
 gi|316914225|gb|EFV35705.1| CBS domain pair [Gemella moribillum M424]
          Length = 206

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 50/127 (39%), Gaps = 8/127 (6%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             PG       V    V          K      + ++ L     G + +V+E   L G+
Sbjct: 63  FSPGE--QREEVKRKSVKEIMGIAITAKSTASYSEVLSKLFIYDVGTIFIVNEENHLVGV 120

Query: 267 ITEGDIFR-NFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV--- 320
            +  D+ +   + D ++L +   M +  N   I ED L++ A++ +  H I  L VV   
Sbjct: 121 TSRKDMLKLARNADADSLPIALAMTRVPNVIYIHEDELVSDALRKIILHEIDCLPVVRED 180

Query: 321 DDCQKAI 327
           D+  + I
Sbjct: 181 DNGNRII 187


>gi|313220306|emb|CBY31163.1| unnamed protein product [Oikopleura dioica]
          Length = 665

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 3/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VI G G S H        +         V  A       G I RDD++I +S SG + 
Sbjct: 332 RIVILGCGTSYHAAIAARQLIEEMSDLPVTVDVASDFVDRSGAIYRDDVVIFVSQSGETA 391

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +  + L YA++    L+ IT+   S ++   D  +      E    G+A T +   Q  +
Sbjct: 392 DTLSALNYAKKRGCLLVGITNTVGSTISRETDCGIHCNAGQE---IGVASTKTFSAQFTV 448

Query: 186 GDALAIALLESRNFSENDF 204
               A+ L E R      +
Sbjct: 449 LVLFALLLSEGRFSKRKRY 467


>gi|296161641|ref|ZP_06844445.1| CBS domain containing protein [Burkholderia sp. Ch1-1]
 gi|295888118|gb|EFG67932.1| CBS domain containing protein [Burkholderia sp. Ch1-1]
          Length = 150

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKL--KGIITEGDIFRNF---HK 278
               +    +   ++DA  I+ ++  G V  V++    K+  +G++T+ DI         
Sbjct: 7   CTRDVVTCGLNATVLDACKIMRDRHVGDVVAVEKSADGKIHPRGLLTDRDIVLAVLAREV 66

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D   L V DVM     V  E   +   ++ +R H I  + VV +  + +G++ F DLL  
Sbjct: 67  DAFGLFVGDVMSSPLIVAYEGEDVWQVVKRMRLHAIRRMPVVSNAGELVGLLSFDDLLDA 126


>gi|257866848|ref|ZP_05646501.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257872636|ref|ZP_05652289.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC10]
 gi|257876433|ref|ZP_05656086.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC20]
 gi|257800806|gb|EEV29834.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC30]
 gi|257806800|gb|EEV35622.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC10]
 gi|257810599|gb|EEV39419.1| phosphosugar-binding transcriptional regulator [Enterococcus
           casseliflavus EC20]
          Length = 250

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++++  E   L+ L  +       +F  AV  +   K  ++  G+G S  +    +   +
Sbjct: 79  VKTLDFESELLNFLARTQDKFFEDKFDEAVHLLME-KELIIFIGVGSSNVVAEYGSLYFS 137

Query: 88  STGTPSFFV-HAAEASHGDLGM-ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           S    +  +   +      L   + +   I+ LS SG + E+   L +       +I IT
Sbjct: 138 SLFNMAIRIEDPSNYPINYLSTELAKKMCIVALSVSGETTEIIQYLNHLNLSESSVIGIT 197

Query: 146 SENKSVVACHADIVLT 161
           S + S ++  ADI +T
Sbjct: 198 SSSNSTLSKLADIAIT 213


>gi|149910168|ref|ZP_01898814.1| CBS domain containing protein [Moritella sp. PE36]
 gi|149806754|gb|EDM66718.1| CBS domain containing protein [Moritella sp. PE36]
          Length = 137

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 47/109 (43%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----LSVEDV 288
           +  G  L+  + + ++ +   V VV+   ++ G ++E D  +              V DV
Sbjct: 17  IPCGTSLVAVVDLFAKHQINAVPVVNSTNEVIGFVSESDCLQALISGSYHCDKPAIVNDV 76

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M KN   +     +      + + N+SV  VV +  + +G++   D+L+
Sbjct: 77  MSKNVVSVSPQDSIIDIAIRMTKDNLSVYPVV-EGGQLVGLIRRGDILQ 124



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 22/50 (44%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M  N   I   T L   + L  +H I+ + VV+   + IG V   D L+ 
Sbjct: 10  MKINAPSIPCGTSLVAVVDLFAKHQINAVPVVNSTNEVIGFVSESDCLQA 59



 Score = 37.2 bits (85), Expect = 3.8,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           V     +ID    +++       VV EG +L G+I  GDI +   ++ N  S
Sbjct: 84  VSPQDSIIDIAIRMTKDNLSVYPVV-EGGQLVGLIRRGDILQVLAENNNQCS 134


>gi|146307317|ref|YP_001187782.1| CBS domain-containing protein [Pseudomonas mendocina ymp]
 gi|145575518|gb|ABP85050.1| CBS domain containing protein [Pseudomonas mendocina ymp]
          Length = 137

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/112 (17%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              ++  ++    + +A +++++   G + + +EG +L G++T+ DI  R     L+   
Sbjct: 7   MTRNVRTLEPERSIREAASLMADIDSGALLI-NEGDRLIGMVTDRDIAIRAVAAGLDGNT 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  VM  N +   +D  +      +    +  L V++  ++ +G+V   ++
Sbjct: 66  PVRQVMSSNVRYCFDDEDVDHVAANMADLQVRRLPVLNREKRLVGVVSLGNI 117



 Score = 40.7 bits (94), Expect = 0.35,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  +M +N + +  +  +  A  L+   +   L++ ++  + IG+V   D+
Sbjct: 1   MKISKIMTRNVRTLEPERSIREAASLMADIDSGALLI-NEGDRLIGMVTDRDI 52


>gi|91225284|ref|ZP_01260452.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           alginolyticus 12G01]
 gi|91189923|gb|EAS76195.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           alginolyticus 12G01]
          Length = 139

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 20  DMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLLDKLVKASYHCQDTHTVQECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  +  +     +++     +  VVD   K +G++   D+LR 
Sbjct: 79  DDVLSVSPEMSVIELADMMKVGKPKMYPVVDGKGKLVGVITRRDVLRA 126



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD   KL G+IT  D+ R  
Sbjct: 70  THTVQECMHDDVLS--VSPEMSVIELADMMKVGKPKMYPVVDGKGKLVGVITRRDVLRAI 127

Query: 277 HKDLNT 282
              LN 
Sbjct: 128 GMTLNE 133



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M        +D  L+ A+ ++++   +    V+D+ +K +G +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTKDMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLL 57


>gi|289541483|gb|ADD09862.1| chloride channel E [Eutrema halophilum]
          Length = 711

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/121 (19%), Positives = 42/121 (34%), Gaps = 17/121 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKD 279
                  V +   L +AIT +  ++     +VD      G++T  DI       +  +K 
Sbjct: 571 MRTRFATVMMTTSLEEAITRMLIEKQSRALIVDPDNIFLGLLTLSDILEFSKARKEVNKR 630

Query: 280 LNTLSVEDVMIKN------PKVILEDTLLTVAMQLLRQHNISVLMVVDDC-----QKAIG 328
                V ++   +      P  +  D  L  A  ++  H IS L VV           +G
Sbjct: 631 PKEFLVNEICSMSGGGCKVPWTVTPDMDLLAAQTIMNTHEISHLPVVSGNIDFRRIHPVG 690

Query: 329 I 329
           +
Sbjct: 691 V 691



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V + M      ++  T L  A+  +     S  ++VD     +G++   D+L F
Sbjct: 567 VSEAMRTRFATVMMTTSLEEAITRMLIEKQSRALIVDPDNIFLGLLTLSDILEF 620


>gi|269968766|ref|ZP_06182756.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           alginolyticus 40B]
 gi|269826611|gb|EEZ80955.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           alginolyticus 40B]
          Length = 130

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 47/108 (43%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +V++ M 
Sbjct: 11  DMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLLDKLVKASYHCQDTHTVQECMH 69

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  +  +     +++     +  VVD   K +G++   D+LR 
Sbjct: 70  DDVLSVSPEMSVIELADMMKVGKPKMYPVVDGKGKLVGVITRRDVLRA 117



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 16/66 (24%), Positives = 24/66 (36%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD   KL G+IT  D+ R  
Sbjct: 61  THTVQECMHDDVLS--VSPEMSVIELADMMKVGKPKMYPVVDGKGKLVGVITRRDVLRAI 118

Query: 277 HKDLNT 282
              LN 
Sbjct: 119 GMTLNE 124



 Score = 36.4 bits (83), Expect = 5.8,   Method: Composition-based stats.
 Identities = 11/49 (22%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 289 MIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M        +D  L+ A+ ++++   +    V+D+ +K +G +   DLL
Sbjct: 1   MTLQAVTFTKDMSLSAALNKVMQSVTLGG-PVIDENEKVVGFLSEQDLL 48


>gi|150015420|ref|YP_001307674.1| sugar isomerase (SIS) [Clostridium beijerinckii NCIMB 8052]
 gi|149901885|gb|ABR32718.1| sugar isomerase (SIS) [Clostridium beijerinckii NCIMB 8052]
          Length = 186

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/183 (22%), Positives = 70/183 (38%), Gaps = 12/183 (6%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
              K  +  LE +L      +     E+I+    +V   G+G+       +A  LA  G 
Sbjct: 6   DISKEIIKELEETLVKISDAEVEQLFEQIQKAD-KVFFVGVGRVLLSLEAVAKRLAHLGI 64

Query: 92  PSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSV 151
            S  V            IT   L+IV S SG +    AI   A++ +  +I I +   S 
Sbjct: 65  NSVVVGQITEP-----AITEKGLLIVGSGSGETAFPLAIARKAKQHNATVIHIGANPNSS 119

Query: 152 VACHADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFY 205
           +   AD  + +P   +         + P TS   Q    +GD +A+ +++ +N      +
Sbjct: 120 MKEFADYFVRIPVSTKLNLPNEVPSIQPMTSLFEQSLLLLGDTIALMMIKEKNIDMPSLW 179

Query: 206 VLH 208
             H
Sbjct: 180 QYH 182


>gi|260893577|ref|YP_003239674.1| CBS domain containing protein [Ammonifex degensii KC4]
 gi|260865718|gb|ACX52824.1| CBS domain containing protein [Ammonifex degensii KC4]
          Length = 209

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 4/111 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
              +    V        +V +   + DA+  L  +  G + VV EG  L+G+++  D  +
Sbjct: 69  ANKIRRYRVKDLHSRPVVVSVETTVYDALITLFLEDVGTLFVVREGGFLEGVVSRKDFLK 128

Query: 275 NF--HKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVD 321
                +D  ++ V  +M + P       +     A + +  H +  L VV+
Sbjct: 129 LAFGGQDFRSVPVSVIMTRRPHVITTTPEESAWEAARKIVVHEVDALPVVE 179


>gi|295399211|ref|ZP_06809193.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|312110187|ref|YP_003988503.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
 gi|294978677|gb|EFG54273.1| CBS domain containing protein [Geobacillus thermoglucosidasius
           C56-YS93]
 gi|311215288|gb|ADP73892.1| CBS domain containing protein [Geobacillus sp. Y4.1MC1]
          Length = 199

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/142 (22%), Positives = 58/142 (40%), Gaps = 7/142 (4%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    +    V        +V     + DAI  +  +  G + VVD+   L
Sbjct: 48  FYTGKTGSQLLADKIKKIKVEDYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVVDDEALL 107

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L T+ V  +M + P   V  +D  L    + L +  I  + V
Sbjct: 108 AGVLSRKDLLRASIGKQELTTIPVNIIMTRMPNVAVCYKDDPLIEVAERLIEKQIDAMPV 167

Query: 320 VDDCQK---AIGIVHFLDLLRF 338
           V   +K    IG +   ++ + 
Sbjct: 168 VRKTEKGYEVIGRITKTNMTKA 189



 Score = 42.6 bits (99), Expect = 0.094,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  + VED     P V+ E+  +  A+  +   ++  L VVDD     G++   DL
Sbjct: 58  LADKIKKIKVEDYQSI-PVVVNENVSVYDAIVTMFLEDVGTLFVVDDEALLAGVLSRKDL 116

Query: 336 LRFGI 340
           LR  I
Sbjct: 117 LRASI 121


>gi|218550364|ref|YP_002384155.1| transcriptional regulator [Escherichia fergusonii ATCC 35469]
 gi|218357905|emb|CAQ90549.1| Transcriptional regulator [Escherichia fergusonii ATCC 35469]
          Length = 301

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  +  +   +R L                 AV  +   +  + +   G S     ++  
Sbjct: 113 ESIISVLETHRRSLDM----------NAISQAVSWLSQARQILALGTGGGSTICSQEIQY 162

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G P    + A         +   D++IVLS  G + E+      AR++   +IAI
Sbjct: 163 RLFRLGLPVVSQNDALMMRMMCSAVMPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAI 222

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           T   ++ +A   D+VL L  +         P  S    LA+ D LA  L  +      D
Sbjct: 223 TP-AQTPLAEQVDLVLPLLVQESDYIFKPTP--SRYAMLAMVDVLATELAMANKAQAKD 278


>gi|189351501|ref|YP_001947129.1| RpiR family transcriptional regulator [Burkholderia multivorans
           ATCC 17616]
 gi|189335523|dbj|BAG44593.1| RpiR family transcriptional regulator [Burkholderia multivorans
           ATCC 17616]
          Length = 311

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L  + Q   +  F  A +++   K   V    G S  +  +L   L   G P      +
Sbjct: 128 ALAHNHQLLRNASFDAAADRLVGAKMIYVYGQGGGSTALADELRFRLVRFGRPVATYQDS 187

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    ++RD +++ LS SG   EL      A+R+   LIAIT+   S +A  AD  
Sbjct: 188 LLQRMVSATLSRDAVVVALSVSGRVPELLENCRLAKRYGASLIAITA-PASPLAKLADH- 245

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +P           P+TS    +   D L   +     
Sbjct: 246 -LIPVVAFETDFIYKPSTSRYAMMMAIDVLVTGVALRLG 283


>gi|160895306|ref|ZP_02076077.1| hypothetical protein CLOL250_02865 [Clostridium sp. L2-50]
 gi|156862999|gb|EDO56430.1| hypothetical protein CLOL250_02865 [Clostridium sp. L2-50]
          Length = 268

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 53/120 (44%), Gaps = 3/120 (2%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNFHK 278
             DVM     +  +     + + I I+ E  +    V D+    + GI+   D  + + +
Sbjct: 50  VRDVMTPRSDVVGIDKHTTMDETIKIMLENNYSRYPVFDDDLDNIVGILYFKDFVKAYLQ 109

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D N  ++E +M   P  +     ++   + +++  I +++VVD+  +  GI+   D+L  
Sbjct: 110 DKNQ-TIEQIM-VEPTFVHPTKNISELFKRMQKEKIHMVIVVDEYGQTEGIIAMEDILEE 167



 Score = 42.6 bits (99), Expect = 0.086,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 31/63 (49%), Gaps = 3/63 (4%)

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDC-QKAIGIVHFLDL 335
           + +   V DVM    +   I + T +   ++++ ++N S   V DD     +GI++F D 
Sbjct: 44  EFSEKEVRDVMTPRSDVVGIDKHTTMDETIKIMLENNYSRYPVFDDDLDNIVGILYFKDF 103

Query: 336 LRF 338
           ++ 
Sbjct: 104 VKA 106


>gi|20808236|ref|NP_623407.1| CBS domain-containing protein [Thermoanaerobacter tengcongensis
           MB4]
 gi|20516833|gb|AAM25011.1| CBS domains [Thermoanaerobacter tengcongensis MB4]
          Length = 435

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/104 (23%), Positives = 46/104 (44%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   + +E +     VVD    L G++T  D+      D     + D+M  NP 
Sbjct: 202 PQQTVRDWKRLYAETKHTRFPVVDSKGMLVGMVTSRDVATASDDD----RIGDIMTPNPV 257

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + T L+ A  L+   N+ +L V    ++ IG++   D+++ 
Sbjct: 258 FVTDTTTLSYAAHLMIWWNVEILPVT-RGKELIGLISREDVIKA 300



 Score = 43.0 bits (100), Expect = 0.066,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V DVM  NP  +     +    +L  +   +   VVD     +G+V   D
Sbjct: 189 VSDVMTYNPVYMTPQQTVRDWKRLYAETKHTRFPVVDSKGMLVGMVTSRD 238


>gi|293603791|ref|ZP_06686207.1| RpiR family transcriptional regulator [Achromobacter piechaudii
           ATCC 43553]
 gi|292817789|gb|EFF76854.1| RpiR family transcriptional regulator [Achromobacter piechaudii
           ATCC 43553]
          Length = 290

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/157 (21%), Positives = 61/157 (38%), Gaps = 3/157 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           S+L + L       F  A   + + +   V    G S  +  ++ S L   G P      
Sbjct: 106 STLRAHLPTFTEQLFEQATSIVDSARMIYVFGMGGASAVLAQEVQSRLVRLGYPIAVYSD 165

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A         +   D ++VLS SG + E+       +++   ++AIT +  S +A  AD+
Sbjct: 166 AVLLRMVAATLDERDAVLVLSASGLTPEIVGAARIVKQYRARIVAIT-DATSELAKLADV 224

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
           VL +  +     +   P+ S    +   D L+  L  
Sbjct: 225 VLPIRTDETDFIYK--PSASRYAMMLAIDLLSTELAM 259


>gi|302337917|ref|YP_003803123.1| IMP dehydrogenase/GMP reductase [Spirochaeta smaragdinae DSM 11293]
 gi|301635102|gb|ADK80529.1| IMP dehydrogenase/GMP reductase [Spirochaeta smaragdinae DSM 11293]
          Length = 503

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/178 (23%), Positives = 64/178 (35%), Gaps = 10/178 (5%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASD 222
           P++ E   +   P +SA MQ   G  LAIAL      S    +   P  +   +     +
Sbjct: 42  PEKEEPARYLEIPFSSAAMQSVSGSDLAIALARKGGCSF--IFCSQPIEEQAAMVRKVKE 99

Query: 223 VMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNFHK 278
                      +    PL +AI I        +AV ++G +   L GI+T+ D +    K
Sbjct: 100 HKAGFVDSDSNISPDDPLSEAIAISKRTGHSTIAVTEDGGRHSRLLGILTDKDYWEF--K 157

Query: 279 DLNTLSVEDVMI--KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           D     V+D     K      E   L  A  +L +     L ++D       +V   D
Sbjct: 158 DDPDRPVKDYFTPLKRLVWAPEGVSLEEATGILHREKKECLPIIDKNGNLASLVFRKD 215


>gi|297538734|ref|YP_003674503.1| sugar isomerase (SIS) [Methylotenera sp. 301]
 gi|297258081|gb|ADI29926.1| sugar isomerase (SIS) [Methylotenera sp. 301]
          Length = 179

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/173 (19%), Positives = 67/173 (38%), Gaps = 8/173 (4%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L S L    + +    ++ ++   GR  I G G+S  +    A  L   G     + 
Sbjct: 9   LDKLTSILSETDNSKAAELLKLVEGA-GRTFIGGAGRSLLVSRFFAMRLVHAGYNVSMIG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL++++S SG ++ L   +  A+     L+ ++ +  S +A  AD
Sbjct: 68  EVVTP-----AIKAGDLLLLVSGSGGTETLLPFVKKAKSVGAKLVVVSMKKSSAMADVAD 122

Query: 158 IVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
           +V+ +  +         P  S      L   +A    L+ +++ +E     +H
Sbjct: 123 LVIQIGNDSSFPLTKGMPMGSQFELSTLVFLEAAIADLIFAKDLTEEGMRAIH 175


>gi|323526774|ref|YP_004228927.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1001]
 gi|323383776|gb|ADX55867.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1001]
          Length = 293

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 117 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++  + E +  L  A     
Sbjct: 173 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYAKETQYCLRVAHHHQA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 227 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|162148024|ref|YP_001602485.1| peptidase protein [Gluconacetobacter diazotrophicus PAl 5]
 gi|161786601|emb|CAP56183.1| putative peptidase protein [Gluconacetobacter diazotrophicus PAl 5]
          Length = 377

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/95 (22%), Positives = 42/95 (44%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             L +A+            V+D   +L+G++T+  +  +   D     V D M      I
Sbjct: 249 TTLDEAVRAAIRCAQTLFPVMDGQGRLQGVLTQAALINHLQIDGPGAVVADAMTPAIPAI 308

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                L+ A++LL++ N+  + VVD   + +G++ 
Sbjct: 309 HPYQPLSEALRLLQEGNLPAVAVVDAGDRLVGLIT 343



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 18/79 (22%), Positives = 34/79 (43%), Gaps = 13/79 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +IP +    PL +A+ +L E     VAVVD G +L G+IT             + ++
Sbjct: 301 MTPAIPAIHPYQPLSEALRLLQEGNLPAVAVVDAGDRLVGLIT-------------SETI 347

Query: 286 EDVMIKNPKVILEDTLLTV 304
            ++M+ +   + +      
Sbjct: 348 GELMLTHGIRVTQGRRAAD 366


>gi|187478769|ref|YP_786793.1| hypothetical protein BAV2279 [Bordetella avium 197N]
 gi|115423355|emb|CAJ49889.1| conserved hypothetical protein [Bordetella avium 197N]
          Length = 151

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/107 (19%), Positives = 47/107 (43%), Gaps = 5/107 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK---DLNTLSVEDVMIK 291
               +  AI  +SE+  G + V+ E   L G++T  +I R+  +    +   ++  +M  
Sbjct: 20  PDTLVSVAIRTMSEQDIGSL-VIMESGMLAGMLTFREIMRHLEQTGGQVGESTIRAIMDD 78

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P  +  +T      +L+   +   + V+D     +G++ F D+ + 
Sbjct: 79  APVSVSPNTSADEVQRLMLDKHARYIPVMDGP-TLMGVISFYDMAQA 124


>gi|328957740|ref|YP_004375126.1| putative transcriptional regulator [Carnobacterium sp. 17-4]
 gi|328674064|gb|AEB30110.1| putative transcriptional regulator [Carnobacterium sp. 17-4]
          Length = 285

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/150 (19%), Positives = 56/150 (37%), Gaps = 1/150 (0%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            L       L  +    V ++      V + G+G S  + S +    +  G         
Sbjct: 106 HLFEETNNVLDTKLIEQVTELLHESSVVYLYGLGASHIVASDIQQKFSRMGKIMVCSLDQ 165

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 + +  +  +   +S SG   E+ A+L  A+   +  +++TS  ++ ++  ADI 
Sbjct: 166 HLLVTSMAVSDKPAVFFGVSNSGEKKEVLALLTIAKELGLKTVSLTSNTENPLSIEADIA 225

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
           L      E+ P     T S + Q+   D L
Sbjct: 226 LKTAFAHEA-PLRSGATISLLTQMYAVDIL 254


>gi|300697550|ref|YP_003748211.1| hypothetical protein RCFBP_mp20393 [Ralstonia solanacearum
           CFBP2957]
 gi|299074274|emb|CBJ53819.1| conserved protein of unknown function, CBS domain [Ralstonia
           solanacearum CFBP2957]
          Length = 155

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/119 (21%), Positives = 50/119 (42%), Gaps = 7/119 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFR---NFHKD 279
              +   + + C L +A   + +K  G + V +    G +  G++T+ DI         D
Sbjct: 7   CSPAAVHIPLSCTLQEAARQMRDKHVGALIVTEHAPTGPRAVGVVTDRDIVLDAVAAGAD 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   V DVM +    +  D  L+ A+Q +    +  + VV   Q  +G++   D+L  
Sbjct: 67  PSQTCVCDVMSRGIVSVARDASLSDALQEMLSTGVRRVGVV-ADQALVGVLSLDDVLGA 124


>gi|282899811|ref|ZP_06307773.1| Multi-sensor Hybrid Histidine Kinase [Cylindrospermopsis
           raciborskii CS-505]
 gi|281195293|gb|EFA70228.1| Multi-sensor Hybrid Histidine Kinase [Cylindrospermopsis
           raciborskii CS-505]
          Length = 1024

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 56/162 (34%), Gaps = 33/162 (20%)

Query: 201 ENDFY---VLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC---- 253
             DF    ++       T                L+     ++DA+ ++++KR       
Sbjct: 4   PPDFSQDELIEQISLNSTRDTDLDLYQVMDPQPLLISPDTSVLDAVVLMNQKRNHGHPGS 63

Query: 254 --------------------VAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMIK 291
                                 ++   +KL GI T  D+ R      +L    + +VM  
Sbjct: 64  QFPQSGNCYTDSDTKWEVTGYVLIQTDKKLLGIFTLTDLSRVVASGSNLAETKIVEVMT- 122

Query: 292 NPKVILEDTLLTVAMQLLR---QHNISVLMVVDDCQKAIGIV 330
            P   L+ + ++    L+    Q+ I  L V+DD  K +GI+
Sbjct: 123 QPVTTLKLSNISNIGTLISTFSQNEIDHLPVIDDQGKVVGII 164


>gi|222152472|ref|YP_002561647.1| 6-phospho-3-hexuloisomerase [Streptococcus uberis 0140J]
 gi|222113283|emb|CAR40823.1| putative 6-phospho-3-hexuloisomerase [Streptococcus uberis 0140J]
          Length = 188

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 12/181 (6%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           +   +  L S+L+     Q    + ++   K RV   G+G+       +A  LA  G  +
Sbjct: 10  QADIIKELTSTLENIEESQVDILINELLKAK-RVFFVGVGRVLLSLEAIAKRLAHIGVDT 68

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             V            IT +DL+IV S SG S     I   A+ ++  ++ I S   S + 
Sbjct: 69  VIVGEITEP-----AITDEDLLIVGSGSGESLFPLMIAKKAKSYNAKVLHIGSNPNSSMK 123

Query: 154 CHADIVLTLPKEPESCPHG----LAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVL 207
             +D  + +P + +    G    + P TS   Q    +GD++A+ L+          +  
Sbjct: 124 EFSDHFVRIPVQTKLGLEGEVASIQPMTSLFEQSLLLLGDSIALELVRRDGIDMKSLWKF 183

Query: 208 H 208
           H
Sbjct: 184 H 184


>gi|168020527|ref|XP_001762794.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162685903|gb|EDQ72295.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 244

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 45/111 (40%), Gaps = 5/111 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQK--LKGIITEGDIFRNFHK--DLNTLSVED 287
              +   + DA+  ++      + VV  G +  L GIITE  + +               
Sbjct: 115 WCSVEDTVYDAVKSMTANNVEALLVVKSGTEKMLAGIITERGLVKLMEMIVLYYDDPYLL 174

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            M      +  DT +  AM+L+  + I  + VV + +K  G+V   D++R 
Sbjct: 175 FMQNKLITVSPDTKVLRAMELMTDNRIRHIPVV-EDKKMKGMVSIGDVVRA 224



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           ++   + +  V     ++ A+ ++++ R   + VV E +K+KG+++ GD+ R  
Sbjct: 173 LLFMQNKLITVSPDTKVLRAMELMTDNRIRHIPVV-EDKKMKGMVSIGDVVRAV 225


>gi|119483249|ref|ZP_01618663.1| hypothetical protein L8106_04331 [Lyngbya sp. PCC 8106]
 gi|119458016|gb|EAW39138.1| hypothetical protein L8106_04331 [Lyngbya sp. PCC 8106]
          Length = 1614

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/124 (26%), Positives = 50/124 (40%), Gaps = 24/124 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGC--------------------VAVVDEGQKLKGIITEGDI 272
           V    PL   I ++S+ R  C                      +V E  +L GI+T+ DI
Sbjct: 24  VSPQTPLYQVIALMSQVRQSCSLPVPRRISTDHLIQDGRASCVLVMENSRLLGIVTQRDI 83

Query: 273 FRNFHKDL--NTLSVEDVMIKNPKVILEDTL--LTVAMQLLRQHNISVLMVVDDCQKAIG 328
            R     +  +++SV  VM   P  +       L  A+  LRQH I  L ++ D Q+  G
Sbjct: 84  VRLMAAGIVDDSVSVSSVMTTPPITLKRSQFHNLFTAINFLRQHQIRHLPILSDHQQVEG 143

Query: 329 IVHF 332
           +V  
Sbjct: 144 LVTL 147



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 34/195 (17%), Positives = 72/195 (36%), Gaps = 12/195 (6%)

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPG 210
            +        +LP         L     A   L + ++  + ++  R     D   L   
Sbjct: 35  ALMSQVRQSCSLPVPRRISTDHLIQDGRASCVLVMENSRLLGIVTQR-----DIVRLMAA 89

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G +      +S +     ++   +       AI  L + +   + ++ + Q+++G++T  
Sbjct: 90  GIVDDSVSVSSVMTTPPITLKRSQFHNLFT-AINFLRQHQIRHLPILSDHQQVEGLVTLE 148

Query: 271 DIFRNFHK-DLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD----DCQ 324
            +       DL  L  VE+VM            +    Q L Q+ IS +++ D    +  
Sbjct: 149 SLRSCLIPLDLLQLRRVEEVMSPGVIYASPSVTVKQVAQQLAQYRISCIVIADKIANNQL 208

Query: 325 KAIGIVHFLDLLRFG 339
           + +GIV   D+++F 
Sbjct: 209 QPLGIVTEGDMVQFK 223



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDE--GQKL--KGIITEGDIF--RNFHKDLNTLSVED 287
                +      L++ R  C+ + D+    +L   GI+TEGD+   +    D + + V+ 
Sbjct: 177 SPSVTVKQVAQQLAQYRISCIVIADKIANNQLQPLGIVTEGDMVQFKALGLD-DHIRVDQ 235

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +M +  K++  D  L  A Q ++Q  +  L+V  +     GIV    +L  
Sbjct: 236 IMDQPLKLLHPDDNLWEAHQQMQQQQVHHLVVGTETGVISGIVTQTSILHA 286


>gi|15679617|ref|NP_276734.1| hypothetical protein MTH1622 [Methanothermobacter
           thermautotrophicus str. Delta H]
 gi|2622748|gb|AAB86095.1| unknown [Methanothermobacter thermautotrophicus str. Delta H]
          Length = 125

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 51/116 (43%), Gaps = 4/116 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTL 283
               +  + I   L D +    E   G   VV EG +  GI+T  D+     +  DL  +
Sbjct: 7   MVTDVDTIDITASLEDVLRNYVENAKGSSVVVKEGVR-VGIVTTWDVLEAIAEGDDLAEV 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            V +VM ++   I     +  A + + ++ +  L+V ++  + IG++   D+LR  
Sbjct: 66  KVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLV-EEDDEIIGVISATDILRAK 120


>gi|171463570|ref|YP_001797683.1| CBS domain containing protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
 gi|171193108|gb|ACB44069.1| CBS domain containing protein [Polynucleobacter necessarius subsp.
           necessarius STIR1]
          Length = 151

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L  A+ ++SE   G + VV E  KL GI+T  +I     K    L  L++  VM
Sbjct: 17  VAPDTALQTAVLVMSEHDIGSL-VVMEYDKLVGILTFREIISALAKHHGKLEGLTINSVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P     +T +    +++   +   L VVD  +  +G++ F D+ +
Sbjct: 76  NQKPLTCNMETEIDEVRRMMLVDHARYLPVVD-QKMLMGVISFYDVAK 122



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  DT L  A+ ++ +H+I  L+V+ +  K +GI+ F +++  
Sbjct: 16  TVAPDTALQTAVLVMSEHDIGSLVVM-EYDKLVGILTFREIISA 58


>gi|29375708|ref|NP_814862.1| CBS domain-containing protein [Enterococcus faecalis V583]
 gi|229546188|ref|ZP_04434913.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX1322]
 gi|229550374|ref|ZP_04439099.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis ATCC 29200]
 gi|255973145|ref|ZP_05423731.1| predicted protein [Enterococcus faecalis T1]
 gi|255976188|ref|ZP_05426774.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256618716|ref|ZP_05475562.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256762140|ref|ZP_05502720.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256852782|ref|ZP_05558152.1| CBS domain-containing protein [Enterococcus faecalis T8]
 gi|256958629|ref|ZP_05562800.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256962272|ref|ZP_05566443.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256965467|ref|ZP_05569638.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|257078017|ref|ZP_05572378.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|257082905|ref|ZP_05577266.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
 gi|257085607|ref|ZP_05579968.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|257086487|ref|ZP_05580848.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|257089544|ref|ZP_05583905.1| predicted protein [Enterococcus faecalis CH188]
 gi|257415746|ref|ZP_05592740.1| CBS domain-containing protein [Enterococcus faecalis AR01/DG]
 gi|257418961|ref|ZP_05595955.1| predicted protein [Enterococcus faecalis T11]
 gi|257422951|ref|ZP_05599941.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|293383301|ref|ZP_06629216.1| CBS domain protein [Enterococcus faecalis R712]
 gi|293387542|ref|ZP_06632091.1| CBS domain protein [Enterococcus faecalis S613]
 gi|294781003|ref|ZP_06746355.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|300859853|ref|ZP_07105941.1| CBS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|307268754|ref|ZP_07550122.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|307273823|ref|ZP_07555045.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|307274565|ref|ZP_07555745.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|307278832|ref|ZP_07559895.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|307291115|ref|ZP_07571000.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|312899607|ref|ZP_07758933.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|312903665|ref|ZP_07762841.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|312905808|ref|ZP_07764828.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|312909137|ref|ZP_07767996.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|312951384|ref|ZP_07770282.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|29343169|gb|AAO80932.1| CBS domain protein [Enterococcus faecalis V583]
 gi|229304496|gb|EEN70492.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis ATCC 29200]
 gi|229308712|gb|EEN74699.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX1322]
 gi|255964163|gb|EET96639.1| predicted protein [Enterococcus faecalis T1]
 gi|255969060|gb|EET99682.1| CBS domain-containing protein [Enterococcus faecalis T2]
 gi|256598243|gb|EEU17419.1| CBS domain-containing protein [Enterococcus faecalis ATCC 4200]
 gi|256683391|gb|EEU23086.1| CBS domain-containing protein [Enterococcus faecalis T3]
 gi|256711241|gb|EEU26279.1| CBS domain-containing protein [Enterococcus faecalis T8]
 gi|256949125|gb|EEU65757.1| CBS domain-containing protein [Enterococcus faecalis DS5]
 gi|256952768|gb|EEU69400.1| CBS domain-containing protein [Enterococcus faecalis Merz96]
 gi|256955963|gb|EEU72595.1| CBS domain-containing protein [Enterococcus faecalis HIP11704]
 gi|256986047|gb|EEU73349.1| CBS domain-containing protein [Enterococcus faecalis JH1]
 gi|256990935|gb|EEU78237.1| CBS domain-containing protein [Enterococcus faecalis E1Sol]
 gi|256993637|gb|EEU80939.1| CBS domain-containing protein [Enterococcus faecalis Fly1]
 gi|256994517|gb|EEU81819.1| CBS domain-containing protein [Enterococcus faecalis D6]
 gi|256998356|gb|EEU84876.1| predicted protein [Enterococcus faecalis CH188]
 gi|257157574|gb|EEU87534.1| CBS domain-containing protein [Enterococcus faecalis ARO1/DG]
 gi|257160789|gb|EEU90749.1| predicted protein [Enterococcus faecalis T11]
 gi|257164775|gb|EEU94735.1| CBS domain-containing protein [Enterococcus faecalis X98]
 gi|291079324|gb|EFE16688.1| CBS domain protein [Enterococcus faecalis R712]
 gi|291083052|gb|EFE20015.1| CBS domain protein [Enterococcus faecalis S613]
 gi|294451949|gb|EFG20399.1| CBS domain protein [Enterococcus faecalis PC1.1]
 gi|300850671|gb|EFK78420.1| CBS domain protein [Enterococcus faecalis TUSoD Ef11]
 gi|306497769|gb|EFM67301.1| CBS domain pair [Enterococcus faecalis TX0411]
 gi|306504503|gb|EFM73710.1| CBS domain pair protein [Enterococcus faecalis TX0860]
 gi|306508717|gb|EFM77807.1| CBS domain pair protein [Enterococcus faecalis TX2134]
 gi|306509508|gb|EFM78556.1| CBS domain pair protein [Enterococcus faecalis TX0855]
 gi|306514882|gb|EFM83429.1| CBS domain pair protein [Enterococcus faecalis TX4248]
 gi|310628147|gb|EFQ11430.1| CBS domain pair protein [Enterococcus faecalis DAPTO 512]
 gi|310630644|gb|EFQ13927.1| CBS domain pair protein [Enterococcus faecalis TX0102]
 gi|310633018|gb|EFQ16301.1| CBS domain pair protein [Enterococcus faecalis TX0635]
 gi|311290561|gb|EFQ69117.1| CBS domain pair protein [Enterococcus faecalis DAPTO 516]
 gi|311293286|gb|EFQ71842.1| CBS domain pair protein [Enterococcus faecalis TX0470]
 gi|315028089|gb|EFT40021.1| CBS domain pair protein [Enterococcus faecalis TX2137]
 gi|315030702|gb|EFT42634.1| CBS domain pair protein [Enterococcus faecalis TX4000]
 gi|315031610|gb|EFT43542.1| CBS domain pair protein [Enterococcus faecalis TX0017]
 gi|315034947|gb|EFT46879.1| CBS domain pair protein [Enterococcus faecalis TX0027]
 gi|315144645|gb|EFT88661.1| CBS domain pair protein [Enterococcus faecalis TX2141]
 gi|315148469|gb|EFT92485.1| CBS domain pair protein [Enterococcus faecalis TX4244]
 gi|315150388|gb|EFT94404.1| CBS domain pair protein [Enterococcus faecalis TX0012]
 gi|315153655|gb|EFT97671.1| CBS domain pair protein [Enterococcus faecalis TX0031]
 gi|315156527|gb|EFU00544.1| CBS domain pair protein [Enterococcus faecalis TX0043]
 gi|315158353|gb|EFU02370.1| CBS domain pair protein [Enterococcus faecalis TX0312]
 gi|315160924|gb|EFU04941.1| CBS domain pair protein [Enterococcus faecalis TX0645]
 gi|315168400|gb|EFU12417.1| CBS domain pair protein [Enterococcus faecalis TX1341]
 gi|315170983|gb|EFU15000.1| CBS domain pair protein [Enterococcus faecalis TX1342]
 gi|315174651|gb|EFU18668.1| CBS domain pair protein [Enterococcus faecalis TX1346]
 gi|315573724|gb|EFU85915.1| CBS domain pair protein [Enterococcus faecalis TX0309B]
 gi|315577493|gb|EFU89684.1| CBS domain pair protein [Enterococcus faecalis TX0630]
 gi|315582661|gb|EFU94852.1| CBS domain pair protein [Enterococcus faecalis TX0309A]
 gi|323480371|gb|ADX79810.1| CBS domain family protein [Enterococcus faecalis 62]
 gi|327534763|gb|AEA93597.1| CBS domain protein [Enterococcus faecalis OG1RF]
 gi|329576377|gb|EGG57890.1| CBS domain protein [Enterococcus faecalis TX1467]
          Length = 162

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGII--TE-----GDIFRNFHKDLNTLSVEDVMI 290
           PL  A  +LS+ R+  + V+D+G +  G+I  T+      D+     + LN  +V DVM 
Sbjct: 32  PLSHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEKLNEFTVADVME 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N  VI E   L   + LL     S L VVDD Q+  GI+   ++L+ 
Sbjct: 92  VNVPVIGESWDLEEVLHLLVDA--SFLPVVDDNQRFKGIITRKEILKA 137


>gi|289522558|ref|ZP_06439412.1| magnesium transporter [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
 gi|289504394|gb|EFD25558.1| magnesium transporter [Anaerobaculum hydrogeniformans ATCC
           BAA-1850]
          Length = 453

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 42/83 (50%), Gaps = 4/83 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + +VD   KL G+++     +    +     VEDVM  N   +L       A +L+ Q++
Sbjct: 172 IYIVDAVGKLVGVLS----LKELLLNEPKTKVEDVMHTNIITVLATADQEEAAKLMSQYD 227

Query: 314 ISVLMVVDDCQKAIGIVHFLDLL 336
           + +L VV++  + +G++   D++
Sbjct: 228 LMILPVVNEQARLVGVITADDIM 250



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 16/63 (25%), Positives = 27/63 (42%), Gaps = 2/63 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                DVMH+      V       +A  ++S+     + VV+E  +L G+IT  DI    
Sbjct: 196 KTKVEDVMHTNIIT--VLATADQEEAAKLMSQYDLMILPVVNEQARLVGVITADDIMDVI 253

Query: 277 HKD 279
            ++
Sbjct: 254 EEE 256


>gi|170754720|ref|YP_001781269.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum B1 str. Okra]
 gi|169119932|gb|ACA43768.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum B1 str. Okra]
          Length = 381

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     V
Sbjct: 258 MITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDKL---V 314

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E+VM K PK +LEDT L   +          L V D   K +G++ 
Sbjct: 315 EEVMNKEPKYVLEDTSLPELLDKFNNLKRGYLPVRDSEGKLLGLIT 360



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            EDVMI  P  +     L  A +++R   +  L+V+D  +  +G +   D+ +  
Sbjct: 254 AEDVMITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIK 308


>gi|255505206|ref|ZP_05344418.3| transcriptional regulator, RpiR family [Bryantella formatexigens
           DSM 14469]
 gi|255269636|gb|EET62841.1| transcriptional regulator, RpiR family [Bryantella formatexigens
           DSM 14469]
          Length = 336

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/185 (17%), Positives = 71/185 (38%), Gaps = 5/185 (2%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
            +     +    ++    ++    + ++     + SL  +       +   AV+ +    
Sbjct: 129 VTDMGEPSGSPSTITSQDSLPDIFQKLL--SANILSLTETFDLLDEKEISRAVDLLYGAH 186

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             V   G G S  +  +  +  ++  T    +  +      + + T  D+I+  S+SG++
Sbjct: 187 -HVYCLGNGSSSVMAMEAWARFSTASTRFIHIADSHMQMLSIALATPQDVILFFSYSGAT 245

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            +++ I+  A +  IP+I +T   KS  A  AD+ L           G     + + Q+ 
Sbjct: 246 RDMEDIMNIAHKRKIPVILVTHFPKSQAAAFADVTLLCGYNESPLQSGSI--AARMGQML 303

Query: 185 IGDAL 189
           I D L
Sbjct: 304 IIDCL 308


>gi|197285017|ref|YP_002150889.1| DNA-binding transcriptional regulator HexR [Proteus mirabilis
           HI4320]
 gi|194682504|emb|CAR42469.1| hex regulon repressor (RpiR-family transcriptional regulator)
           [Proteus mirabilis HI4320]
          Length = 280

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ LE+          + AV+ +   + ++   G+G S  +     +  +    P  + 
Sbjct: 102 AMAGLENVKNNLDIAVINRAVDILTQAR-KISFFGLGASAAVAHDAMNKFSRFNIPVTYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +IAIT+   S++A  A
Sbjct: 161 DDVIMQRMSCINSIDGDVVVIVSHTGRTKNLVEIAKIARENDASVIAITTSG-SLLAAEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + + L    ++  +   P  S + QL + D LA   +  R     D
Sbjct: 220 TLPILLDVPEDTDIY--MPMISRLAQLTVIDVLATGFILRRGPKFRD 264


>gi|189499263|ref|YP_001958733.1| putative signal-transduction protein with CBS domains [Chlorobium
           phaeobacteroides BS1]
 gi|189494704|gb|ACE03252.1| putative signal-transduction protein with CBS domains [Chlorobium
           phaeobacteroides BS1]
          Length = 148

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 9/121 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFRNF-------H 277
                  +K  C + +AI ++ +     + V         G++TE DI           H
Sbjct: 16  MQKDFHTIKGSCTVAEAIQLMKKDHQSGLIVEPRNDDDCYGVVTEKDILEKVIDPGEDVH 75

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +D     V  +M K    I     +  A++L+++ N+  L V+    K +G+++  D+L 
Sbjct: 76  RDPWNTPVFQIMSKPIISINPSLRIKYALRLMKRTNVRRLTVM-ADDKVVGVLNMSDVLH 134

Query: 338 F 338
            
Sbjct: 135 A 135



 Score = 36.0 bits (82), Expect = 8.5,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           L T  V  +M K+   I     +  A+QL+++ + S L+V   +     G+V   D+L
Sbjct: 7   LRTQPVSALMQKDFHTIKGSCTVAEAIQLMKKDHQSGLIVEPRNDDDCYGVVTEKDIL 64


>gi|116792673|gb|ABK26453.1| unknown [Picea sitchensis]
 gi|116793625|gb|ABK26816.1| unknown [Picea sitchensis]
 gi|224286660|gb|ACN41034.1| unknown [Picea sitchensis]
          Length = 242

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + V D+  K  G+I++ D  +         +V +VM      +  +  +  A  L+ 
Sbjct: 151 ISGLPVTDKDLKCIGVISKKD--KAKAPKGLKSTVGEVMSSPAITLSAEKTVLDAAVLML 208

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  I  + +V+D  + +GIV   D+   
Sbjct: 209 KSKIHRIPIVNDADQVVGIVTRADIFNA 236



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 8/56 (14%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM +  +    + LL         ++   IS L V D   K IG++   D  + 
Sbjct: 125 GDVMSRTIRTATAEQLLEDI-----DYHFASISGLPVTDKDLKCIGVISKKDKAKA 175



 Score = 36.8 bits (84), Expect = 5.2,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                ++DA  ++ + +   + +V++  ++ GI+T  DIF    
Sbjct: 195 SAEKTVLDAAVLMLKSKIHRIPIVNDADQVVGIVTRADIFNALE 238


>gi|54293724|ref|YP_126139.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
 gi|296106328|ref|YP_003618028.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
           Alcoy]
 gi|53753556|emb|CAH15011.1| hypothetical protein lpl0777 [Legionella pneumophila str. Lens]
 gi|295648229|gb|ADG24076.1| hypothetical protein lpa_01144 [Legionella pneumophila 2300/99
           Alcoy]
          Length = 144

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 53/114 (46%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLN--T 282
               I  +     + + I  + EK  G + V D    L GI++E DI R  FHK+L+  T
Sbjct: 12  PPRKIAYIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKNLSLET 71

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV+  N  ++     +  AMQ++ +     +++  +  + + I+   DLL
Sbjct: 72  AKVSDVVYNNVTILSPHDSVEKAMQVITETKRRHVLI-QEEGELLAILSIGDLL 124



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  D  +   ++ + + +I  L+V D+    IGIV   D+LR
Sbjct: 18  YIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILR 60


>gi|152977031|ref|YP_001376548.1| CBS domain-containing protein [Bacillus cereus subsp. cytotoxis NVH
           391-98]
 gi|152025783|gb|ABS23553.1| CBS domain containing protein [Bacillus cytotoxicus NVH 391-98]
          Length = 214

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 40/117 (34%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + ++D+  ++ GII++ D+              D+    +
Sbjct: 15  HPDDTIETAIRTIRTKGIRHIPIIDQNTQIVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
             +M    +       +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  HLIMKHPVRTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 42.2 bits (98), Expect = 0.10,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 26/50 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  D  +  A++ +R   I  + ++D   + +GI+   D
Sbjct: 3   VEEIMNQDVIALHPDDTIETAIRTIRTKGIRHIPIIDQNTQIVGIISDRD 52


>gi|294339252|emb|CAZ87608.1| Putative HPP family protein [Thiomonas sp. 3As]
          Length = 360

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 47/135 (34%), Gaps = 5/135 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                                +   +    + DA+  L E     + V+D  +++ GI+T
Sbjct: 212 QTQAYQQRLDSVRCSDIMQRDVQTARPDDSVADALHRLEEHGIKALPVIDAQRQVIGIVT 271

Query: 269 EGDIFRN-----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
             D+  +          +   V   M +  +V+     L+  + L        + VVDD 
Sbjct: 272 AADLRTDPDAAPSAMRESATPVAARMTRRVQVVSAARHLSELIPLFAGSGHHHIPVVDDA 331

Query: 324 QKAIGIVHFLDLLRF 338
            + +G++   D++R 
Sbjct: 332 ARLVGMITQSDVMRA 346



 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 48/230 (20%), Positives = 84/230 (36%), Gaps = 25/230 (10%)

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G+S  +   L        P   I       +A    I   L   P     G+A   +  +
Sbjct: 55  GASAVIVFALPS-SPLGRPWSVIGGNTLGTLA---GITCALWIGPPWLAAGMAVGGAIAL 110

Query: 182 QLAIG-----DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
            L           A  L    + ++  F    P      L V  + + H+    P     
Sbjct: 111 MLQARCLHPPGGAAALLAVLTHTTDWRFA-FMPVALNSALLVLCALLWHAATRRPHPAPQ 169

Query: 237 CPLIDAIT----ILSEK------RFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSV 285
            P  DA+      LS        R+G   V+D +   L+G++ +    + + + L+++  
Sbjct: 170 -PAADAVLPNADELSSAIDAAVARYG--EVLDIDRATLRGLLEDAQ-TQAYQQRLDSVRC 225

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D+M ++ +    D  +  A+  L +H I  L V+D  ++ IGIV   DL
Sbjct: 226 SDIMQRDVQTARPDDSVADALHRLEEHGIKALPVIDAQRQVIGIVTAADL 275



 Score = 42.6 bits (99), Expect = 0.097,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                + +V     L + I + +      + VVD+  +L G+IT+ D+ R  H+
Sbjct: 296 RMTRRVQVVSAARHLSELIPLFAGSGHHHIPVVDDAARLVGMITQSDVMRALHR 349


>gi|288925009|ref|ZP_06418945.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella buccae D17]
 gi|315608046|ref|ZP_07883039.1| glutamine-fructose-6-phosphate transaminase [Prevotella buccae ATCC
           33574]
 gi|288338199|gb|EFC76549.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella buccae D17]
 gi|315250515|gb|EFU30511.1| glutamine-fructose-6-phosphate transaminase [Prevotella buccae ATCC
           33574]
          Length = 634

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 11/151 (7%)

Query: 58  EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           +++   K R +I   G S H   IG ++  T      P    +A+E       ++T+DD+
Sbjct: 313 QQLLNAK-RFIIVACGTSWHAGLIGKQMIETYCR--IPVEVEYASE-FRYRNPVVTKDDV 368

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S SG + +  A +  A+     +  I +   S +A   D    +   PE    G+A
Sbjct: 369 VIAISQSGETADTLAAIKLAKEKGAFIYGICNAIGSSIARATDTGTYIHVGPE---IGVA 425

Query: 175 PTTSAIMQLAIGDALAIALLESRN-FSENDF 204
            T +   Q+ +   LA+A+ + R   S  D+
Sbjct: 426 STKAFTGQVTVLTLLALAIGKERGTISTEDY 456


>gi|265766625|ref|ZP_06094454.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
 gi|263253002|gb|EEZ24478.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 2_1_16]
          Length = 497

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  LAI L  +RN   +  +   P      +            +   
Sbjct: 51  NIPFVSAIMQSVSGPELAIEL--ARNGGLSFIFGSQPIASQAEMVRKVKKFKAGFVTSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +     L D + +L +     + + D+      L G++T  D      +D     ++D 
Sbjct: 109 NLTPEHTLEDVLRLLRQTGHSTIGITDDGSPNGHLLGLVTSRDYR--ISRDPLDKKIKDF 166

Query: 289 MIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKA 326
           M    K+I+ +    L+ A Q++  H ++ L ++D   + 
Sbjct: 167 MTPFEKLIVGEVGLTLSEANQIIWDHKLNTLPIIDKEGRL 206


>gi|302416001|ref|XP_003005832.1| inosine-5'-monophosphate dehydrogenase IMD2 [Verticillium
           albo-atrum VaMs.102]
 gi|261355248|gb|EEY17676.1| inosine-5'-monophosphate dehydrogenase IMD2 [Verticillium
           albo-atrum VaMs.102]
          Length = 539

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/187 (18%), Positives = 61/187 (32%), Gaps = 17/187 (9%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           + + L  P           P  S+ M       +AI +            V+H       
Sbjct: 62  SAVNLDSPVTKRVTL--KTPFVSSPMDTVTEHEMAIHMALQGGLG-----VVHHNCSPEA 114

Query: 216 LFVCASDVMH----SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V            ++     + +A  +  +  FG   V + G+   KL GI+T
Sbjct: 115 QADMIRKVKRYENGFILDPVVISRDTTVGEAKALKEKWGFGGFPVTENGKLGSKLLGIVT 174

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI   F +D    S+ +VM+           L  A ++L +     L +VD     + 
Sbjct: 175 NRDI--QFEED-PETSISNVMVTELITAPSGVDLPDANKILAKSKKGKLPIVDKEGNLVS 231

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 232 MISRSDL 238


>gi|222824229|ref|YP_002575803.1| flagellin modification protein PtmE, sugar-phosphate nucleotide
           transferase [Campylobacter lari RM2100]
 gi|222539451|gb|ACM64552.1| flagellin modification protein PtmE, putative sugar-phosphate
           nucleotide transferase [Campylobacter lari RM2100]
          Length = 345

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 1/95 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKN 292
           +    + DA+ I+ + R     VVDE   L GII++ +I +      +   S+E +  KN
Sbjct: 11  RANSSIKDALNIIGKLRVRLGIVVDENDDLLGIISDSNIRKALLNGYDLNESIEKIYTKN 70

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           P ++ E T     ++L  +++I    +++   K I
Sbjct: 71  PILVSEKTSEKDLLKLSAKYDIYDFPIINKNGKII 105


>gi|320527365|ref|ZP_08028547.1| transcriptional regulator, RpiR family [Solobacterium moorei F0204]
 gi|320132222|gb|EFW24770.1| transcriptional regulator, RpiR family [Solobacterium moorei F0204]
          Length = 282

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/192 (21%), Positives = 68/192 (35%), Gaps = 8/192 (4%)

Query: 7   HFKSVTRKGHSLMK--NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           H K+  +  +  +K  ++      +      + L   E  +  E   +      KI    
Sbjct: 78  HAKTGEQMYNEEIKRTDNIADIIRKVTAKNAKSLDETEKLMDIETLHE----CVKIMNDA 133

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             V++ G+G S      L   L     P        +        T +D+ IV S+SG++
Sbjct: 134 RNVILIGMGASLVALRDLYLKLLRISKPCTINEDWHSQLLSCKNSTAEDVAIVCSYSGNT 193

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            E+   +   +    P+IAIT    + V+  AD  L             A  +S I QL 
Sbjct: 194 TEVITCMNALKENLTPIIAITRCVDTPVSKLADYKLYT--TENESLLRTAAMSSRISQLN 251

Query: 185 IGDALAIALLES 196
           I D L  AL   
Sbjct: 252 IIDILYTALGTM 263


>gi|309780156|ref|ZP_07674907.1| membrane protein, HPP family/CBS domain protein [Ralstonia sp.
           5_7_47FAA]
 gi|308920859|gb|EFP66505.1| membrane protein, HPP family/CBS domain protein [Ralstonia sp.
           5_7_47FAA]
          Length = 394

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +    L+  D+M      +L  T +  A++LLRQH    L VVD+ ++ +GIV  +D
Sbjct: 243 AYTRTFQALTCADIMTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTRVD 302

Query: 335 LL 336
           LL
Sbjct: 303 LL 304



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD------------IF 273
               +  V  G  +  A+ +L +  F  + VVDEG+++ GI+T  D            + 
Sbjct: 257 MTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTRVDLLGLAPADMRQTLR 316

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R F     T   V D M    + I  +  ++  + +        + V+D   +  GIV  
Sbjct: 317 RWFSIGALTPPRVADHMKTRVQTIAANAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTE 376

Query: 333 LDLL 336
            DL+
Sbjct: 377 SDLV 380



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           H    +  +    P+ D + + +      + V+D   +L GI+TE D+    ++  N
Sbjct: 332 HMKTRVQTIAANAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTESDLVGGLYRQAN 388


>gi|289550539|ref|YP_003471443.1| multiple CBS domains-containing cytosolic protein [Staphylococcus
           lugdunensis HKU09-01]
 gi|289180071|gb|ADC87316.1| multiple CBS domains-containing cytosolic protein [Staphylococcus
           lugdunensis HKU09-01]
          Length = 433

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 78/213 (36%), Gaps = 14/213 (6%)

Query: 126 ELKAILYYARRFSIPLIAITSENK-SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           E++ ++ Y  + ++ ++    + +   +     +++T   +        A      +  +
Sbjct: 104 EIRDLIKYISKQTLLIVGNREDAQFEALKRGCAVLITGGFKTSKRIINYANEHQLPILSS 163

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D   +A + +R        + +    +    +   D++   +   ++     L +   
Sbjct: 164 NYDTFLVANIINR-------AMFNQ--IIRKEILIVEDIVKPVNETTVIFSHMGLKEYKE 214

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                      VVD+  KL GIIT          D + + ++ VM K P  +   T +  
Sbjct: 215 KAKTTGHSRFPVVDQNWKLVGIITS---KETIDMDHDDV-IQSVMTKPPINVELSTTVAS 270

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++    I +L V    +K +G++   D+L+
Sbjct: 271 CAHMMIWEGIEILPVTTTNKKILGVITREDVLK 303


>gi|237507484|ref|ZP_04520199.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|234999689|gb|EEP49113.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
          Length = 183

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  +++    G + V  +  +L G+IT+ D+  R          
Sbjct: 48  MSRDVVHVAPSDSIRHAAELMARFDIGALPVC-QNSRLIGMITDRDLAVRAVSAGKAPDT 106

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V ++    P     +D  +    + +    +  + VVD  ++ +G++   D+
Sbjct: 107 KVHEIAS-GPIEWCFDDDQVDNVQKYMADAQVRRMPVVDHDKRLVGMLSIGDI 158



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + ++M ++   +     +  A +L+ + +I  L V     + IG++   DL
Sbjct: 42  QRINEIMSRDVVHVAPSDSIRHAAELMARFDIGALPVC-QNSRLIGMITDRDL 93


>gi|161503786|ref|YP_001570898.1| putative transcriptional regulator [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:-- str. RSK2980]
 gi|160865133|gb|ABX21756.1| hypothetical protein SARI_01873 [Salmonella enterica subsp.
           arizonae serovar 62:z4,z23:--]
          Length = 293

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/156 (23%), Positives = 54/156 (34%), Gaps = 3/156 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L  +L      Q    V+ ++     V I G+G SG     +   L   G     V    
Sbjct: 121 LSETLNLLDMQQVLGVVDALRHCHS-VYIFGVGSSGITALDMKHKLMRIGLRGDAVSNNH 179

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
             +    ++   D+ I +S SG+S E    L  AR      +AIT    S +   AD  L
Sbjct: 180 FMYMQATLLKAGDVAIGVSHSGTSPETVHSLRLARLAGATTVAITHNLGSPLCEEADFCL 239

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
                            +   QL + D L   L++S
Sbjct: 240 INGNRQGMLQGDSI--GTKAAQLFVFDLLYTLLVQS 273


>gi|161523738|ref|YP_001578750.1| RpiR family transcriptional regulator [Burkholderia multivorans
           ATCC 17616]
 gi|160341167|gb|ABX14253.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           ATCC 17616]
          Length = 313

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 59/159 (37%), Gaps = 3/159 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           +L  + Q   +  F  A +++   K   V    G S  +  +L   L   G P      +
Sbjct: 130 ALAHNHQLLRNASFDAAADRLVGAKMIYVYGQGGGSTALADELRFRLVRFGRPVATYQDS 189

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                    ++RD +++ LS SG   EL      A+R+   LIAIT+   S +A  AD  
Sbjct: 190 LLQRMVSATLSRDAVVVALSVSGRVPELLENCRLAKRYGASLIAITA-PASPLAKLADH- 247

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             +P           P+TS    +   D L   +     
Sbjct: 248 -LIPVVAFETDFIYKPSTSRYAMMMAIDVLVTGVALRLG 285


>gi|73668502|ref|YP_304517.1| hypothetical protein Mbar_A0965 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395664|gb|AAZ69937.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 271

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 53/116 (45%), Gaps = 3/116 (2%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLNT-LSV 285
             P V     +I A  ++ + +   V VV     + + G+++  DI RN     N   ++
Sbjct: 71  QSPTVTPDMDIIKAAKLMVQSKQNRVPVVKSTTDRTVVGVLSNVDILRNVEVPKNIPKTL 130

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGII 341
           + VM K  K   ++  +++    + + + + + VV    + IG++   D+++ G +
Sbjct: 131 QAVMTKKVKTCSQEDKVSIVWAHMLETDYTGIPVVSKKGEPIGMITRRDIIKSGAV 186



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 49/101 (48%), Gaps = 4/101 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILE 298
           +  A  ++ +     + VVDE  +L G++++ DI R      + ++V     ++P  +  
Sbjct: 20  VTRARQLMRDYLLRSLVVVDEENRLVGMLSDQDILR-ITSTRSNVTVGGYASQSP-TVTP 77

Query: 299 DTLLTVAMQLLRQHNISVLMVVDD--CQKAIGIVHFLDLLR 337
           D  +  A +L+ Q   + + VV     +  +G++  +D+LR
Sbjct: 78  DMDIIKAAKLMVQSKQNRVPVVKSTTDRTVVGVLSNVDILR 118



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 31/54 (57%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V ++M   P  I E   +T A QL+R + +  L+VVD+  + +G++   D+LR 
Sbjct: 3   VSEIMTDEPVSIKEREFVTRARQLMRDYLLRSLVVVDEENRLVGMLSDQDILRI 56



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/122 (17%), Positives = 47/122 (38%), Gaps = 11/122 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH-------- 277
               +        +      + E  +  + VV +  +  G+IT  DI ++          
Sbjct: 134 MTKKVKTCSQEDKVSIVWAHMLETDYTGIPVVSKKGEPIGMITRRDIIKSGAVRTEVEDE 193

Query: 278 ---KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
              +   +  VE +M      + E+  +  A++++   +I  + +V++  +  GIV   D
Sbjct: 194 RRTRPNESPKVEKIMSTPTYTLSENDSIQSAIEMIIHQDIGRVTIVNEKDRVSGIVDRQD 253

Query: 335 LL 336
           LL
Sbjct: 254 LL 255


>gi|53714821|ref|YP_100813.1| inosine 5-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
 gi|52217686|dbj|BAD50279.1| inosine-5'-monophosphate dehydrogenase [Bacteroides fragilis YCH46]
          Length = 497

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  LAI L  +RN   +  +   P      +            +   
Sbjct: 51  NIPFVSAIMQSVSGPELAIEL--ARNGGLSFIFGSQPIASQAEMVRKVKKFKAGFVTSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +     L D + +L +     + + D+      L G++T  D      +D     ++D 
Sbjct: 109 NLTPEHTLEDVLRLLRQTGHSTIGITDDGSPNGHLLGLVTSRDYR--ISRDPLDKKIKDF 166

Query: 289 MIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKA 326
           M    K+I+ +    L+ A Q++  H ++ L ++D   + 
Sbjct: 167 MTPFEKLIVGEVGLTLSEANQIIWDHKLNTLPIIDKEGRL 206


>gi|320155965|ref|YP_004188344.1| putative signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
 gi|319931277|gb|ADV86141.1| predicted signal-transduction protein containing cAMP-binding and
           CBS domains [Vibrio vulnificus MO6-24/O]
          Length = 625

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/119 (18%), Positives = 54/119 (45%), Gaps = 8/119 (6%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQK--LKGIITEGDI-FRNFHKDL 280
             + P +     +  A   +++++   + V+   DE  +  + GI+T+ D+  R   +  
Sbjct: 157 TRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVTDRDLCTRVVAQGK 216

Query: 281 N-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +V  VM      +  +  +  AM  + +HN+  L ++    + +GI+   D++R+
Sbjct: 217 SPNEAVASVMTPQVIRLDHNAYVYEAMLTMLRHNVHHLPIL-QGDRLLGIIEATDIVRY 274



 Score = 36.8 bits (84), Expect = 4.8,   Method: Composition-based stats.
 Identities = 16/64 (25%), Positives = 26/64 (40%), Gaps = 5/64 (7%)

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQK--AIGIVH 331
             DL T  V  ++ +    I     +  A Q +    +S L+V+   D+  +    GIV 
Sbjct: 144 ANDLTTSKVRTLLTRTAPTIDASATIQTAAQRMADEQVSSLLVLQTADEENRDPIAGIVT 203

Query: 332 FLDL 335
             DL
Sbjct: 204 DRDL 207


>gi|319892750|ref|YP_004149625.1| Hypothetical cytosolic protein [Staphylococcus pseudintermedius
           HKU10-03]
 gi|317162446|gb|ADV05989.1| Hypothetical cytosolic protein [Staphylococcus pseudintermedius
           HKU10-03]
 gi|323464217|gb|ADX76370.1| CBS domain protein [Staphylococcus pseudintermedius ED99]
          Length = 431

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 4/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++   +    +     + D      E       +VD   KL G+IT 
Sbjct: 180 NQMIKKEILVVEDIVIPIEQTSFLYDEMTVADVGKKSRETSHSRFPIVDRQNKLAGLITS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI     KDL+   +  VM K    +   T +     L+    I +L V  + ++ +G+
Sbjct: 240 KDI---IGKDLDE-KLYRVMTKPAISVQLSTTVASCAHLMIWEGIELLPVTGNQKQLVGV 295

Query: 330 VHFLDLLRF 338
           +   D+L+ 
Sbjct: 296 ISREDVLKA 304


>gi|153006662|ref|YP_001380987.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030235|gb|ABS28003.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
          Length = 605

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 44/113 (38%), Gaps = 6/113 (5%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TLS 284
                 V+    + DA  I+ E     V V        GI+T+ D   R    DL    S
Sbjct: 159 KRPPVWVEETSTVRDAARIMREASISSVLV---RGAPAGIVTDRDFRNRVLADDLGPETS 215

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  ++ +  + +   T +  A + L    +  L VV   +  +G+V   DLL+
Sbjct: 216 LTRIVSRPLRTVTVGTPIYEAWRTLLDAGVHHLPVVRGDE-IVGVVTAGDLLK 267


>gi|60682809|ref|YP_212953.1| inosine 5-monophosphate dehydrogenase [Bacteroides fragilis NCTC
           9343]
 gi|253565926|ref|ZP_04843380.1| inositol-5-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|60494243|emb|CAH09036.1| putative inosine-5'-monophosphate dehydrogenase (GMP biosynthesis)
           [Bacteroides fragilis NCTC 9343]
 gi|251945030|gb|EES85468.1| inositol-5-monophosphate dehydrogenase [Bacteroides sp. 3_2_5]
 gi|301164278|emb|CBW23836.1| putative inosine-5'-monophosphate dehydrogenase (GMP biosynthesis)
           [Bacteroides fragilis 638R]
          Length = 497

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/160 (20%), Positives = 61/160 (38%), Gaps = 10/160 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  SAIMQ   G  LAI L  +RN   +  +   P      +            +   
Sbjct: 51  NIPFVSAIMQSVSGPELAIEL--ARNGGLSFIFGSQPIASQAEMVRKVKKFKAGFVTSDS 108

Query: 233 -VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            +     L D + +L +     + + D+      L G++T  D      +D     ++D 
Sbjct: 109 NLTPEHTLEDVLRLLRQTGHSTIGITDDGSPNGHLLGLVTSRDYR--ISRDPLDKKIKDF 166

Query: 289 MIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKA 326
           M    K+I+ +    L+ A Q++  H ++ L ++D   + 
Sbjct: 167 MTPFEKLIVGEVGLTLSEANQIIWDHKLNTLPIIDKEGRL 206


>gi|150016968|ref|YP_001309222.1| sigma-54 dependent trancsriptional regulator [Clostridium
           beijerinckii NCIMB 8052]
 gi|149903433|gb|ABR34266.1| sigma54 specific transcriptional regulator, Fis family [Clostridium
           beijerinckii NCIMB 8052]
          Length = 590

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 5/106 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVMI 290
           ++K      +A  +  E       VVD   KL  I+T+ D+ +   +K      +E + +
Sbjct: 13  VLKPNNTFEEAAKLFIENGIDGAPVVDRDGKLISIVTKTDLMKAILNKLEMNTKLETLEL 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K    I  +  +   +    ++N+  L V+D   K IGI+   D +
Sbjct: 73  KKVITINSEMNIEDVL----KYNVGRLPVIDKNNKIIGIITHTDFI 114



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 27/56 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V+++M K   V+  +     A +L  ++ I    VVD   K I IV   DL++ 
Sbjct: 1   MKVKELMTKKVLVLKPNNTFEEAAKLFIENGIDGAPVVDRDGKLISIVTKTDLMKA 56


>gi|329888084|ref|ZP_08266682.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
 gi|328846640|gb|EGF96202.1| CBS domain pair family protein [Brevundimonas diminuta ATCC 11568]
          Length = 142

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/106 (19%), Positives = 39/106 (36%), Gaps = 5/106 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIK 291
               L DA   L  ++ G + V  +   + G+++E DI R   +D        V   M  
Sbjct: 19  PDASLNDACAELERRQVGALIVCQDAS-VVGVLSERDIVRAISRDGPEALKRPVSHYMTS 77

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                     +   M  +    I  L V+   ++  G+V   D+++
Sbjct: 78  EVVFADPAETVEALMARMTDRRIRHLPVL-LDKRLAGVVSIGDVVK 122


>gi|325498672|gb|EGC96531.1| Transcriptional regulator [Escherichia fergusonii ECD227]
          Length = 287

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  +  +   +R L                 AV  +   +  + +   G S     ++  
Sbjct: 99  ESIISVLETHRRSLDM----------NAISQAVSWLSQARQILALGTGGGSTICSQEIQY 148

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G P    + A         +   D++IVLS  G + E+      AR++   +IAI
Sbjct: 149 RLFRLGLPVVSQNDALMMRMMCSAVMPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAI 208

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           T   ++ +A   D+VL L  +         P  S    LA+ D LA  L  +      D
Sbjct: 209 TP-AQTPLAEQVDLVLPLLVQESDYIFKPTP--SRYAMLAMVDVLATELAMANKAQAKD 264


>gi|315658033|ref|ZP_07910906.1| CBS domain protein [Staphylococcus lugdunensis M23590]
 gi|315496923|gb|EFU85245.1| CBS domain protein [Staphylococcus lugdunensis M23590]
          Length = 442

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/213 (14%), Positives = 78/213 (36%), Gaps = 14/213 (6%)

Query: 126 ELKAILYYARRFSIPLIAITSENK-SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
           E++ ++ Y  + ++ ++    + +   +     +++T   +        A      +  +
Sbjct: 113 EIRDLIKYISKQTLLIVGNREDAQFEALKRGCAVLITGGFKTSKRIINYANEHQLPILSS 172

Query: 185 IGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAIT 244
             D   +A + +R        + +    +    +   D++   +   ++     L +   
Sbjct: 173 NYDTFLVANIINR-------AMFNQ--IIRKEILIVEDIVKPVNETTVIFSHMGLKEYKE 223

Query: 245 ILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
                      VVD+  KL GIIT          D + + ++ VM K P  +   T +  
Sbjct: 224 KAKTTGHSRFPVVDQNWKLVGIITS---KETIDMDHDDV-IQSVMTKPPINVELSTTVAS 279

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              ++    I +L V    +K +G++   D+L+
Sbjct: 280 CAHMMIWEGIEILPVTTTNKKILGVITREDVLK 312


>gi|256852330|ref|ZP_05557706.1| conserved hypothetical protein [Enterococcus faecalis T8]
 gi|256712184|gb|EEU27216.1| conserved hypothetical protein [Enterococcus faecalis T8]
          Length = 242

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 78/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAEK--RGLSSLESSL----QGELSFQFHCAVEKIKAI 63
            +   G S +K +  + A ++   E        +++ L    Q         A++ I   
Sbjct: 53  KMGYAGFSELKYAVKEEAKQTQTFENFYDATVHVDAFLKKLNQETYYEMLRPAIQMIVQA 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 113 R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 169

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 170 TNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 229

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 230 VIALIELLA 238


>gi|330686167|gb|EGG97785.1| magnesium transporter [Staphylococcus epidermidis VCU121]
          Length = 463

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 47/108 (43%), Gaps = 9/108 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAV-----VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           K   P+ +A+  + E+      +     V+E  +L G+++  D+        N   +EDV
Sbjct: 159 KSTTPVKEALMHVKEQAPNAETIYVIFAVNEDDQLVGVLSLRDLITA----ENDAYIEDV 214

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +    +   T      Q++R ++   + VVD     +GI+   D+L
Sbjct: 215 MSERVISVDVATDQEDVAQIMRDYDFIAVPVVDYQNHLLGIITIDDIL 262



 Score = 36.8 bits (84), Expect = 5.3,   Method: Composition-based stats.
 Identities = 9/62 (14%), Positives = 23/62 (37%), Gaps = 9/62 (14%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-------ISVLMVVDDCQKAIGIVHFLDLL 336
           +   +M      +   T +  A+  +           I V+  V++  + +G++   DL+
Sbjct: 146 TAGGIMTTEYLSLKSTTPVKEAL--MHVKEQAPNAETIYVIFAVNEDDQLVGVLSLRDLI 203

Query: 337 RF 338
             
Sbjct: 204 TA 205


>gi|330507965|ref|YP_004384393.1| CBS domain pair protein [Methanosaeta concilii GP-6]
 gi|328928773|gb|AEB68575.1| CBS domain pair protein [Methanosaeta concilii GP-6]
          Length = 259

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/128 (21%), Positives = 57/128 (44%), Gaps = 4/128 (3%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD--EGQKLKGIITEGDI 272
           T       V      +P V     ++DA  I+ +++   + VV+  E + L+G++T  DI
Sbjct: 57  TSTKSNVTVSGFKVQVPAVTGDTDVLDAARIMLKEKSNLLPVVESQEDKTLRGVVTIIDI 116

Query: 273 FRNFH-KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           F++     +    + ++M         D  +T     + + + + L +V D  K +GI+ 
Sbjct: 117 FKHLDISKVPKKPIGEIMSTKVVTARLDEPVTKVWDRMVERDFTGLPMVRDE-KPMGIIT 175

Query: 332 FLDLLRFG 339
             D+L+ G
Sbjct: 176 RFDILKRG 183



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 15/116 (12%)

Query: 234 KIGCPLIDAITILSEKRF-GCVAVVDEGQKLKGIITEGDIFRNFHKDLNT---------- 282
           ++  P+      + E+ F G   V DE  K  GIIT  DI +     ++           
Sbjct: 142 RLDEPVTKVWDRMVERDFTGLPMVRDE--KPMGIITRFDILKRGWARISKESETRPVERM 199

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L  E +M      +     +  A++L+ +H++  + VVD+  + +GIV   DL++
Sbjct: 200 QLPAEKLMSSPLYSLGPTASVAEAIELMLKHDVGRVSVVDE-GRIMGIVDRSDLIK 254



 Score = 50.3 bits (119), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 33/54 (61%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VED+  ++P  + + T LT A QL+R +++  L VVD   + +G++   D+LR 
Sbjct: 3   VEDIFSRDPLYVEDSTYLTKARQLIRDNHVRGLPVVDSRVQVLGVITSQDVLRI 56



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 51/111 (45%), Gaps = 12/111 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V+    L  A  ++ +     + VVD   ++ G+IT  D+ R       T +  +V +  
Sbjct: 14  VEDSTYLTKARQLIRDNHVRGLPVVDSRVQVLGVITSQDVLRI------TSTKSNVTVSG 67

Query: 293 PKV----ILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDLLR 337
            KV    +  DT +  A +++ +   ++L VV+  + +   G+V  +D+ +
Sbjct: 68  FKVQVPAVTGDTDVLDAARIMLKEKSNLLPVVESQEDKTLRGVVTIIDIFK 118


>gi|256826635|ref|YP_003150594.1| inosine 5-monophosphate dehydrogenase [Cryptobacterium curtum DSM
           15641]
 gi|256582778|gb|ACU93912.1| IMP dehydrogenase/GMP reductase [Cryptobacterium curtum DSM 15641]
          Length = 505

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 57/161 (35%), Gaps = 12/161 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ    D +A+AL       F      +      +  +    +  + S  ++
Sbjct: 51  NIPMISAIMQAVSDDGMAVALATEGGMSFIYGSQTIADEAAMVARVKAYKAGFVVSDSNL 110

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
                   L + + +  +     + V D+G    KL GI+TE D      +      V D
Sbjct: 111 T---PQMTLGEVVALAEKTGHSTMPVTDDGTAHGKLVGIVTERDYR--LSRMSLDEKVAD 165

Query: 288 VMIKN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
            M           DT L  A  ++  + ++ L ++D   K 
Sbjct: 166 FMTPRAELITAPADTTLKQANDIIWDNKLNSLPLIDTDDKL 206


>gi|297618873|ref|YP_003706978.1| putative signal transduction protein [Methanococcus voltae A3]
 gi|297377850|gb|ADI36005.1| putative signal transduction protein with CBS domains
           [Methanococcus voltae A3]
          Length = 281

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 46/114 (40%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLS 284
             +    VK      + +++  E R+G + +  +   L  +ITE D+       L+  L 
Sbjct: 89  MTEDPICVKETALTKELVSLFVE-RYGGLPITSKDDILITVITERDLLDKLADKLDVNLK 147

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D M KNP +      L    +++ ++    L V  +     GI+   D ++ 
Sbjct: 148 INDYMTKNPVLASMGQTLGDVAKVMLRNGFRRLPVASEGN-LKGIITSTDFIKL 200



 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/127 (22%), Positives = 52/127 (40%), Gaps = 16/127 (12%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH------- 277
           +   +  L  +G  L D   ++    F  + V  EG  LKGIIT  D  +          
Sbjct: 151 YMTKNPVLASMGQTLGDVAKVMLRNGFRRLPVASEGN-LKGIITSTDFIKLIGSEWAFEK 209

Query: 278 ------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGI 329
                  ++    + ++M +N K +  +  +  A+ L+  +N   + +VD     K +GI
Sbjct: 210 LKTGNIDEITDTRISELMNENVKTLTPENSILDAVNLILNNNFGAIPIVDSENSTKIVGI 269

Query: 330 VHFLDLL 336
           +   D+L
Sbjct: 270 ITEKDIL 276



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 25/136 (18%), Positives = 52/136 (38%), Gaps = 18/136 (13%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG-QKLKGIITEGDIFRNF 276
           +  + +++    I  +     +IDA+T+L  K      +VD G  ++ G++T  DI   F
Sbjct: 1   MKITSIINPEKQIIKLFPTTSIIDALTMLYNKNMRRAIIVDAGTNRVVGVLTNTDIVNLF 60

Query: 277 HKD----------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
                              +    ++++M ++P  + E  L    + L  +     L + 
Sbjct: 61  GGGSKYNLVKSKHNGNFYAMINEPIKEIMTEDPICVKETALTKELVSLFVER-YGGLPIT 119

Query: 321 DDCQKAIGIVHFLDLL 336
                 I ++   DLL
Sbjct: 120 SKDDILITVITERDLL 135



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 18/72 (25%), Positives = 31/72 (43%), Gaps = 3/72 (4%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGI 266
             G +  +       + + +   L      ++DA+ ++    FG + +VD     K+ GI
Sbjct: 211 KTGNIDEITDTRISELMNENVKTLTPEN-SILDAVNLILNNNFGAIPIVDSENSTKIVGI 269

Query: 267 ITEGDIFRNFHK 278
           ITE DI   F K
Sbjct: 270 ITEKDILSCFCK 281


>gi|227552919|ref|ZP_03982968.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis HH22]
 gi|227177953|gb|EEI58925.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis HH22]
          Length = 161

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGII--TE-----GDIFRNFHKDLNTLSVEDVMI 290
           PL  A  +LS+ R+  + V+D+G +  G+I  T+      D+     + LN  +V DVM 
Sbjct: 32  PLSHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEKLNEFTVADVME 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N  VI E   L   + LL     S L VVDD Q+  GI+   ++L+ 
Sbjct: 92  VNVPVIGESWDLEEVLHLLVDA--SFLPVVDDNQRFKGIITRKEILKA 137


>gi|209522740|ref|ZP_03271298.1| protein of unknown function CP12 [Arthrospira maxima CS-328]
 gi|209496789|gb|EDZ97086.1| protein of unknown function CP12 [Arthrospira maxima CS-328]
          Length = 205

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDI---FRNFHKDLN 281
               +  ++    + +A+  +++     + V     Q   GI+TE D+      + KD  
Sbjct: 9   MTTDVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVIYKVTAYGKDPK 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            + V ++M K    I  D  +    +L  Q  I    V+ +    +GIV   D+L  G
Sbjct: 69  KMRVYEIMTKPCISINPDLGVEYVARLFAQTGIRRAPVIQEE--LLGIVSITDILSKG 124



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDLL 336
           L  +D+M  +   I     +  A++ +    +  L+V     Q A GIV   D++
Sbjct: 3   LKAKDIMTTDVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVI 57


>gi|260892154|ref|YP_003238251.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Ammonifex degensii KC4]
 gi|260864295|gb|ACX51401.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Ammonifex degensii KC4]
          Length = 606

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/168 (26%), Positives = 75/168 (44%), Gaps = 16/168 (9%)

Query: 40  SLESSLQGELSF------QFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTG 90
           +L  +L+G +        +   A   ++  + R+ +T  G +   G +G  L   LA   
Sbjct: 262 ALRDTLRGRIEGGRVVFPELEEAAFHLRECR-RLFLTACGTAFHAGLVGKYLLEKLARLP 320

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             +    A+E  + DL  +   D+++V+S SG + +  A L  A+     ++AIT+   S
Sbjct: 321 VEADI--ASEFRYRDL-TLGPGDVVLVISQSGETADTLAALRLAKEKGAKVLAITNVVGS 377

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            VA  AD VL     PE     +A T +   Q+ +   LA+ L E R 
Sbjct: 378 SVAREADWVLYTWAGPEIA---VASTKAYTAQVLLVTLLALYLAELRG 422


>gi|229105293|ref|ZP_04235942.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-28]
 gi|228678219|gb|EEL32447.1| Acetoin utilization protein AcuB [Bacillus cereus Rock3-28]
          Length = 214

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/126 (17%), Positives = 45/126 (35%), Gaps = 15/126 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FH 277
              ++  +     +  AI  +  K    + +VD+   + GII++ D+             
Sbjct: 7   MNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQHNHVVGIISDRDVRDASPSILDEQVS 66

Query: 278 KDLNTLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----F 332
            D+    +E +M K+P         +     L  ++ I  L V     K +GI+      
Sbjct: 67  LDMLQQPLELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVL 124

Query: 333 LDLLRF 338
             L++ 
Sbjct: 125 HTLVKL 130



 Score = 50.7 bits (120), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 12/50 (24%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M +N   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQNVVTLHPNDTIETAIRTIRTKGIRHIPIVDQHNHVVGIISDRD 52


>gi|224029611|gb|ACN33881.1| unknown [Zea mays]
          Length = 772

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/131 (22%), Positives = 48/131 (36%), Gaps = 31/131 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------------HK 278
           V     + + + +L +++  C  VVD    L+GIIT GDI R                  
Sbjct: 619 VLPSATVTEVLNLLHDRQQNCALVVDPEDFLEGIITLGDIRRMGYGLHVESFINGDHPKA 678

Query: 279 DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMVVD-------- 321
           D N+ S+   + +                DT LT A  L+    I  L VV         
Sbjct: 679 DDNSSSISSCLTRGFQYRGSERGLLTCFPDTDLTTAKSLMEARGIKQLPVVKRGVAHRTA 738

Query: 322 DCQKAIGIVHF 332
             ++ I ++H+
Sbjct: 739 GKRRPIALLHY 749



 Score = 46.0 bits (108), Expect = 0.009,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K    +L    +T  + LL     +  +VVD      GI+   D+ R G
Sbjct: 603 LDDLKVFQAMSKIYLKVLPSATVTEVLNLLHDRQQNCALVVDPEDFLEGIITLGDIRRMG 662


>gi|168184713|ref|ZP_02619377.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Bf]
 gi|237794977|ref|YP_002862529.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Clostridium botulinum Ba4 str. 657]
 gi|182672231|gb|EDT84192.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Bf]
 gi|229262930|gb|ACQ53963.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum Ba4 str. 657]
          Length = 381

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     V
Sbjct: 258 MITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDKL---V 314

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E+VM K PK +LEDT L   +          L V D   K +G++ 
Sbjct: 315 EEVMNKEPKYVLEDTSLPELLDKFNNLKRGYLPVRDSEGKLLGLIT 360



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            EDVMI  P  +     L  A +++R   +  L+V+D  +  +G +   D+ +  
Sbjct: 254 AEDVMITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIK 308


>gi|170051202|ref|XP_001861658.1| inosine-5'-monophosphate dehydrogenase [Culex quinquefasciatus]
 gi|167872535|gb|EDS35918.1| inosine-5'-monophosphate dehydrogenase [Culex quinquefasciatus]
          Length = 512

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/189 (16%), Positives = 63/189 (33%), Gaps = 10/189 (5%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +   + L        +  AP  S+ M       +AIA+           +          
Sbjct: 40  SADAVDLASPLTKKINLKAPLVSSPMDTVTEADMAIAMALCGGIGI--IHHNCTPEFQAN 97

Query: 216 LFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGD 271
                    H     P+V      + D +    +  F    + + G   ++L GI+T  D
Sbjct: 98  EVHKVKKYKHGFIRDPIVMSPENTVADVLEAKRKNGFTGYPITEHGRLGERLIGIVTSRD 157

Query: 272 IFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           I  +F ++   L + D+M K  +         L  A  +L +     L +V+   + + +
Sbjct: 158 I--DFREEDVDLKLRDIMTKIEDMVTAPSGVTLQEANHILEKSKKGKLPIVNKNGELVAL 215

Query: 330 VHFLDLLRF 338
           +   DL + 
Sbjct: 216 IARTDLKKA 224


>gi|307730440|ref|YP_003907664.1| RpiR family transcriptional regulator [Burkholderia sp. CCGE1003]
 gi|307584975|gb|ADN58373.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1003]
          Length = 293

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 117 AREFIAASRSGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++  + E +  L  A     
Sbjct: 173 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYAKETQYCLRIAHHHQA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 227 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|300768671|ref|ZP_07078568.1| CBS domain protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308181633|ref|YP_003925761.1| CBS domain protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|300493763|gb|EFK28934.1| CBS domain protein [Lactobacillus plantarum subsp. plantarum ATCC
           14917]
 gi|308047124|gb|ADN99667.1| CBS domain protein [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 211

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 51/126 (40%), Gaps = 14/126 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD----- 279
           +    + +V     +  A+ ++ +     + V+  G ++ G+IT G I R          
Sbjct: 6   YMTPRLVVVSPKTTISVAVELMKKNAIHRLPVM-AGNRMVGLITHGIIQRAMPSQATSLS 64

Query: 280 -------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L   +V+ +M    + +     L  A+  +R++ I VL V+   Q  +GI+  
Sbjct: 65  VYELNYLLTKTTVDQIMETAVQTVAATAQLETAIATMRKNKIGVLPVMTGDQ-VVGIITN 123

Query: 333 LDLLRF 338
            D+L  
Sbjct: 124 NDILDA 129



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +SV D M     V+   T ++VA++L++++ I  L V+    + +G++    +++
Sbjct: 1   MSVADYMTPRLVVVSPKTTISVAVELMKKNAIHRLPVM-AGNRMVGLIT-HGIIQ 53


>gi|260590051|ref|ZP_05855964.1| CBS domain protein [Blautia hansenii DSM 20583]
 gi|331084367|ref|ZP_08333471.1| hypothetical protein HMPREF0992_02395 [Lachnospiraceae bacterium
           6_1_63FAA]
 gi|260539563|gb|EEX20132.1| CBS domain protein [Blautia hansenii DSM 20583]
 gi|330401631|gb|EGG81212.1| hypothetical protein HMPREF0992_02395 [Lachnospiraceae bacterium
           6_1_63FAA]
          Length = 145

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 20/114 (17%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKV 295
            L   +  +   ++ C+ +++E  K  G ITEGD+        DLN  S E+V    P  
Sbjct: 21  SLRQVLEKMEYHKYSCIPIINERGKYTGTITEGDLLWGLKNRADLNLKSAEEV----PIT 76

Query: 296 ----------ILEDTLLTVAMQL-LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                     I  D+ +   +   +RQ+    + VVDD +  IGIV   D++++
Sbjct: 77  SFERRTDYTPIRVDSDMEDLLDKAMRQN---FVPVVDDQKNFIGIVTRRDIMQY 127


>gi|224286408|gb|ACN40911.1| unknown [Picea sitchensis]
          Length = 242

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/88 (20%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
              + V D+  K  G+I++ D  +         +V +VM      +  +  +  A  L+ 
Sbjct: 151 ISGLPVTDKDLKCIGVISKKD--KAKAPKGLKSTVGEVMSSPAITLSAEKTVLDAAVLML 208

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  I  + +V+D  + +GIV   D+   
Sbjct: 209 KSKIHRIPIVNDADQVVGIVTRADIFNA 236



 Score = 38.7 bits (89), Expect = 1.1,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 8/56 (14%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHN---ISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM +  +    + LL         ++   IS L V D   K IG++   D  + 
Sbjct: 125 GDVMSRTIRTATAEQLLEDI-----DYHFASISGLPVTDKDLKCIGVISKKDKAKA 175



 Score = 36.8 bits (84), Expect = 5.4,   Method: Composition-based stats.
 Identities = 9/44 (20%), Positives = 22/44 (50%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                ++DA  ++ + +   + +V++  ++ GI+T  DIF    
Sbjct: 195 SAEKTVLDAAVLMLKSKIHRIPIVNDADQVVGIVTRADIFNALE 238


>gi|241661650|ref|YP_002980010.1| CBS domain-containing membrane protein [Ralstonia pickettii 12D]
 gi|240863677|gb|ACS61338.1| CBS domain containing membrane protein [Ralstonia pickettii 12D]
          Length = 382

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 33/62 (53%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +    L+  D+M      +   T +  A+QLLRQH    L VVD+ ++ +GIV  +D
Sbjct: 231 AYTRTFQALTCADIMTAPVVTVSAGTSIPRALQLLRQHGFKALPVVDEGRRVVGIVTRVD 290

Query: 335 LL 336
           LL
Sbjct: 291 LL 292



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 48/124 (38%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD------------IF 273
               +  V  G  +  A+ +L +  F  + VVDEG+++ GI+T  D            + 
Sbjct: 245 MTAPVVTVSAGTSIPRALQLLRQHGFKALPVVDEGRRVVGIVTRVDLLGLAPADLRQTLR 304

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R F     T   V D M    + I     ++  + +        + V+D   +  GIV  
Sbjct: 305 RWFSIGALTPPRVADHMKTRVQTIAASAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTE 364

Query: 333 LDLL 336
            DL+
Sbjct: 365 SDLV 368



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           H    +  +    P+ D + + +      + V+D   +L GI+TE D+    ++  N
Sbjct: 320 HMKTRVQTIAASAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTESDLVGGLYRQAN 376


>gi|124023450|ref|YP_001017757.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
           9303]
 gi|123963736|gb|ABM78492.1| IMP dehydrogenase-like protein [Prochlorococcus marinus str. MIT
           9303]
          Length = 156

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/133 (20%), Positives = 51/133 (38%), Gaps = 27/133 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKD------------ 279
           V     L +A+ ++++     + VV++   L G +TE D+  R    D            
Sbjct: 18  VVPATSLQEAVQLMTDHHISGLPVVNDDGTLVGELTEQDLMVRESGVDAGPYVLLLDSVI 77

Query: 280 --------------LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                         +   SV D+M  +     E   L  A  +L   +   L V++D +K
Sbjct: 78  YLRNPLNWDKQVHQVLGTSVNDLMRSDTHTCNEALPLPRAAAMLHDRSTQRLFVINDQRK 137

Query: 326 AIGIVHFLDLLRF 338
            +G++   D++R 
Sbjct: 138 LVGVITRGDVVRA 150



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 31/57 (54%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +V+DVM      ++  T L  A+QL+  H+IS L VV+D    +G +   DL+
Sbjct: 2   VLQQTVKDVMSTPVLSVVPATSLQEAVQLMTDHHISGLPVVNDDGTLVGELTEQDLM 58



 Score = 36.4 bits (83), Expect = 6.0,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                       PL  A  +L ++    + V+++ +KL G+IT GD+ R  
Sbjct: 101 MRSDTHTCNEALPLPRAAAMLHDRSTQRLFVINDQRKLVGVITRGDVVRAL 151


>gi|134291302|ref|YP_001115071.1| CBS domain-containing protein [Burkholderia vietnamiensis G4]
 gi|134134491|gb|ABO58816.1| CBS domain containing protein [Burkholderia vietnamiensis G4]
          Length = 141

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/112 (22%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
                  +     L +A  ++     G + V D G +L G++T+ DI  R     +    
Sbjct: 8   MTRDAATIAPTQTLREAAQMMDALNVGALPVCD-GTRLIGMLTDRDIVVRAVSMGVRPDE 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +E V+        ED  ++     + +  I  + VVD  ++ +GIV   DL
Sbjct: 67  PIEGVVSGPANWCYEDDDISAVQNKMAEAQIRRVPVVDRDKRLVGIVALGDL 118



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            SV +VM ++   I     L  A Q++   N+  L V D   + IG++   D++
Sbjct: 2   TSVSEVMTRDAATIAPTQTLREAAQMMDALNVGALPVCDGT-RLIGMLTDRDIV 54


>gi|269961006|ref|ZP_06175375.1| inosine monophosphate dehydrogenase-related protein [Vibrio harveyi
           1DA3]
 gi|269834225|gb|EEZ88315.1| inosine monophosphate dehydrogenase-related protein [Vibrio harveyi
           1DA3]
          Length = 139

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 236 GCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMI 290
              L  A+  ++     G   V+DE +K+ G ++E D+     K      +T +VE+ M 
Sbjct: 20  NMSLTAALDKVMQSVTLGG-PVIDENEKVIGFLSEQDLLDKLVKASYHCQDTHTVEECMH 78

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +   +  +  +     +++     +  VVDD  K +G++   D+LR 
Sbjct: 79  LDALSVSPEMSIIELADMMKVGKPKMYPVVDDKDKLVGVITRRDVLRA 126



 Score = 45.7 bits (107), Expect = 0.010,   Method: Composition-based stats.
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                + MH       V     +I+   ++   +     VVD+  KL G+IT  D+ R  
Sbjct: 70  THTVEECMHLDALS--VSPEMSIIELADMMKVGKPKMYPVVDDKDKLVGVITRRDVLRAI 127

Query: 277 HKDLNT 282
            K LN 
Sbjct: 128 GKTLNE 133



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++L V+D M        ++  LT A+ ++++   +    V+D+ +K IG +   DLL
Sbjct: 1   MHSLKVKDYMTLQAVTFTKNMSLTAALDKVMQSVTLGG-PVIDENEKVIGFLSEQDLL 57


>gi|223996071|ref|XP_002287709.1| hypothetical protein THAPSDRAFT_261272 [Thalassiosira pseudonana
           CCMP1335]
 gi|220976825|gb|EED95152.1| hypothetical protein THAPSDRAFT_261272 [Thalassiosira pseudonana
           CCMP1335]
          Length = 141

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 3/123 (2%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
           +  ++ M +     +      L      L+E    CV V+ E  K  GIIT+ DI R F 
Sbjct: 1   MKVAEYMTAAKEAQVAAPDTKLASIAKQLTENNVSCVVVI-ENIKPVGIITKTDITRAFA 59

Query: 278 KDLNTLS-VEDVMI-KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + ++  +  E  M  +N   +   T       ++++  I  ++VVD      GI    D+
Sbjct: 60  RGVSADTLAESFMTSENLVCVNTGTQTDDIADMIQKEKIHHIVVVDGDGNFAGIASSWDI 119

Query: 336 LRF 338
            R 
Sbjct: 120 ARE 122


>gi|229815582|ref|ZP_04445909.1| hypothetical protein COLINT_02633 [Collinsella intestinalis DSM
           13280]
 gi|229808812|gb|EEP44587.1| hypothetical protein COLINT_02633 [Collinsella intestinalis DSM
           13280]
          Length = 288

 Score = 65.7 bits (159), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 1/123 (0%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
            +E++L           V+  +   G V+   +G +  +    A      G         
Sbjct: 112 EIEATLDALDPDTLRRVVDLFRRA-GLVMFAAVGNTNAVAIDAAIKFGQLGIRCVANTIT 170

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
           E+S      + +DD+++++S SG S  L+ IL  A+     +I I     + +A  ADIV
Sbjct: 171 ESSTSLALTMGKDDVLVLVSNSGKSQRLERILRAAKHGGATVILICGNENAPLARLADIV 230

Query: 160 LTL 162
           L  
Sbjct: 231 LRT 233


>gi|229032316|ref|ZP_04188289.1| Acetoin utilization protein AcuB [Bacillus cereus AH1271]
 gi|228729096|gb|EEL80099.1| Acetoin utilization protein AcuB [Bacillus cereus AH1271]
          Length = 214

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/118 (18%), Positives = 42/118 (35%), Gaps = 15/118 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +VD+   + GII++ D+              D+    +
Sbjct: 15  HPNDTIETAIRTIRTKGIRHIPIVDQSNHVVGIISDRDVRDASPSILDEQVSLDMLKQPL 74

Query: 286 EDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           E +M K+P         +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  ELIM-KHPVMTCHPLDFVEEIATLFFENKIGCLPVT-KAGKLVGIISESTVLHTLVKL 130



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 25/50 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M ++   +  +  +  A++ +R   I  + +VD     +GI+   D
Sbjct: 3   VEEIMNQDVVTLHPNDTIETAIRTIRTKGIRHIPIVDQSNHVVGIISDRD 52


>gi|153938769|ref|YP_001390973.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|168180292|ref|ZP_02614956.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum NCTC 2916]
 gi|152934665|gb|ABS40163.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. Langeland]
 gi|182668881|gb|EDT80859.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum NCTC 2916]
 gi|295319032|gb|ADF99409.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum F str. 230613]
          Length = 381

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     V
Sbjct: 258 MITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIKEKDKL---V 314

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E+VM K PK +LEDT L   +          L V D   K +G++ 
Sbjct: 315 EEVMNKEPKYVLEDTSLPELLDKFNNLKRGYLPVRDSEGKLLGLIT 360



 Score = 53.7 bits (128), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            EDVMI  P  +     L  A +++R   +  L+V+D  +  +G +   D+ +  
Sbjct: 254 AEDVMITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERNLLGYIKLEDIQKIK 308


>gi|153954175|ref|YP_001394940.1| hypothetical protein CKL_1550 [Clostridium kluyveri DSM 555]
 gi|219854784|ref|YP_002471906.1| hypothetical protein CKR_1441 [Clostridium kluyveri NBRC 12016]
 gi|146347056|gb|EDK33592.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
 gi|219568508|dbj|BAH06492.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 125

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/105 (24%), Positives = 48/105 (45%), Gaps = 2/105 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIK 291
           K    L  A+ ++ +       +VDE  +L G+I + DI+R        +T  V+  M K
Sbjct: 14  KKEDSLCKALDMMDDHNVNGAPIVDEDGQLTGMIVKADIYRFLMEEGHYDTCPVDWAMTK 73

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  V   +  +    + +R++NI  + V+DD     G V   D++
Sbjct: 74  DVVVAKSEEDIMTVAKRIRENNIVAIPVIDDKNVVKGTVSIEDIM 118



 Score = 43.7 bits (102), Expect = 0.036,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 30/55 (54%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+++M  N   + ++  L  A+ ++  HN++   +VD+  +  G++   D+ RF
Sbjct: 1   MVQEIMKSNIVKLKKEDSLCKALDMMDDHNVNGAPIVDEDGQLTGMIVKADIYRF 55


>gi|160901561|ref|YP_001567142.1| RpiR family transcriptional regulator [Petrotoga mobilis SJ95]
 gi|160359205|gb|ABX30819.1| transcriptional regulator, RpiR family [Petrotoga mobilis SJ95]
          Length = 269

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/161 (18%), Positives = 62/161 (38%), Gaps = 2/161 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +++L   L+     +   A E I   K +++   +G+S  I    +   A+ G  S 
Sbjct: 92  NRTVNALTDILRQVDRDKITHASEIIMNSK-KLLFYAVGRSFPIALDASLKFAALGFAST 150

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                         + +DD++I +S SG   +       A+      I +T+   S ++ 
Sbjct: 151 AYSDPHMQVIVASNLEKDDVVIAISHSGVIRDTYKSAQVAKEAGAFTIGMTAGVNSPLSK 210

Query: 155 HADIVLTLPKE-PESCPHGLAPTTSAIMQLAIGDALAIALL 194
             ++VL    E P+     ++      M   + +++A  + 
Sbjct: 211 IVNLVLYTSAEMPQESEFTVSRIGEMFMVELLYNSVASKMS 251


>gi|145589161|ref|YP_001155758.1| CBS domain-containing protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
 gi|145047567|gb|ABP34194.1| CBS domain containing protein [Polynucleobacter necessarius subsp.
           asymbioticus QLW-P1DMWA-1]
          Length = 151

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 5/108 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V     L  A+ ++SE   G + V+D   KL GI+T  ++     K    L+ L V  VM
Sbjct: 17  VAPETALQTAVLVMSEHDIGSLVVMDYE-KLVGILTFREVIAALAKHHGKLDGLQVNSVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            + P     +T +    +++   +   L VVD  +  +G++ F D+ +
Sbjct: 76  NQKPLTCNMETEIDEVRRMMLVDHARYLPVVD-QKMLMGVISFYDVAK 122



 Score = 38.7 bits (89), Expect = 1.5,   Method: Composition-based stats.
 Identities = 12/44 (27%), Positives = 27/44 (61%), Gaps = 1/44 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  +T L  A+ ++ +H+I  L+V+D  +K +GI+ F +++  
Sbjct: 16  TVAPETALQTAVLVMSEHDIGSLVVMD-YEKLVGILTFREVIAA 58


>gi|86742311|ref|YP_482711.1| signal-transduction protein [Frankia sp. CcI3]
 gi|86569173|gb|ABD12982.1| putative signal-transduction protein with CBS domains [Frankia sp.
           CcI3]
          Length = 122

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
           ++  G  L  A  +++ ++ G   V D   +  GI+TE D+ R+    +D +     D +
Sbjct: 7   MIGPGHTLRQAARLMAARKVGAAVVHDADSEGYGILTERDVLRSIAAAQDPDVEIAGDHL 66

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++      +  L  A   + +     L+V        GI+   D++R
Sbjct: 67  TRDVVFADPEWSLDEAAAAMLRGGFRHLIVTSGGG-VAGILSMRDVVR 113


>gi|237741762|ref|ZP_04572243.1| CBS domain-containing protein [Fusobacterium sp. 4_1_13]
 gi|256845090|ref|ZP_05550548.1| CBS domain-containing protein [Fusobacterium sp. 3_1_36A2]
 gi|294785622|ref|ZP_06750910.1| CBS domain protein [Fusobacterium sp. 3_1_27]
 gi|229429410|gb|EEO39622.1| CBS domain-containing protein [Fusobacterium sp. 4_1_13]
 gi|256718649|gb|EEU32204.1| CBS domain-containing protein [Fusobacterium sp. 3_1_36A2]
 gi|294487336|gb|EFG34698.1| CBS domain protein [Fusobacterium sp. 3_1_27]
          Length = 199

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/121 (25%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + I   + DAI  L     G + VV E +KL GII+  
Sbjct: 56  GYSYNNKCTIIKVKDYMSPQNSIDIRTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 114

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P +I   ED  +  A++ L +H I  L V+  +  K
Sbjct: 115 DLLKATLNKKNIEKTPVSMIMTRMPNIIHCFEDDNIIEAIEKLIKHEIDSLPVLRKEKGK 174

Query: 326 A 326
            
Sbjct: 175 L 175



 Score = 36.4 bits (83), Expect = 7.2,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+D M      I   T +  A+  L  +++  L+VV++  K +GI+   DLL+ 
Sbjct: 67  KVKDYMSPQN-SIDIRTSVYDAIIHLFNYDLGTLVVVENE-KLVGIISRKDLLKA 119


>gi|222100658|ref|YP_002535226.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
 gi|221573048|gb|ACM23860.1| CBS domain containing protein [Thermotoga neapolitana DSM 4359]
          Length = 201

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/112 (21%), Positives = 45/112 (40%), Gaps = 4/112 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
               P+V+    + + +  + + +     V D    LKG++   D+  +   D     + 
Sbjct: 8   THDFPVVEETATVGECLRKMRQYQTNECVVKDSEGHLKGVVNREDLI-DLEMD---SPIS 63

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D +      I E+  +T A+ L  +H    L VVD+  + +G V   D L  
Sbjct: 64  DRISLPEFFIHENDSITHALLLFLEHQEPYLPVVDEELRVVGAVSLHDFLEA 115


>gi|168185638|ref|ZP_02620273.1| CBS domain containing protein [Clostridium botulinum C str. Eklund]
 gi|169296544|gb|EDS78677.1| CBS domain containing protein [Clostridium botulinum C str. Eklund]
          Length = 431

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/113 (19%), Positives = 48/113 (42%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  +     + +   I+++ +     VVD  + + GI+T  D+     K  N   +
Sbjct: 194 MITDPIYINFDDTIENFKNIINKNKHQRYPVVDNNKNVVGIVTIKDL----QKQHNNKLI 249

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +++M +    + E T +  A  ++    I +  VV   ++ IG+V   D+L+ 
Sbjct: 250 KEIMSRELITVTEKTTVAYAAHIMGWEGIELCPVV-QGRQLIGVVSTEDILKA 301



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 27/53 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +ED+MI +P  I  D  +     ++ ++      VVD+ +  +GIV   DL +
Sbjct: 190 IEDIMITDPIYINFDDTIENFKNIINKNKHQRYPVVDNNKNVVGIVTIKDLQK 242


>gi|239628067|ref|ZP_04671098.1| sugar isomerase [Clostridiales bacterium 1_7_47_FAA]
 gi|239518213|gb|EEQ58079.1| sugar isomerase [Clostridiales bacterium 1_7_47FAA]
          Length = 180

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/181 (20%), Positives = 66/181 (36%), Gaps = 12/181 (6%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           EK  ++    +L      +    ++ I   + +V   G+G+       +A   A  G  +
Sbjct: 2   EKTVIAECGEALAAIRYDEIQAYLDAILKAE-KVFFVGVGRVLLALQCIAKRYAHLGIRT 60

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
             V            IT  D+++V S SG +     I   A+     ++ I S  +S + 
Sbjct: 61  VVVGEITEP-----AITDKDVLVVGSGSGETLFPAGIARKAKALGATVVHIGSNPRSGLR 115

Query: 154 CHADIVLTLPKEPE----SCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYVL 207
             AD+ + +P E         H   P TS   Q     GD  A+ ++E R       +  
Sbjct: 116 DVADVFVRIPVESRAKAEDEIHSKQPMTSLFEQSLLLFGDTTAMMMVEDRGIDVGKLWQY 175

Query: 208 H 208
           H
Sbjct: 176 H 176


>gi|333029845|ref|ZP_08457906.1| magnesium transporter [Bacteroides coprosuis DSM 18011]
 gi|332740442|gb|EGJ70924.1| magnesium transporter [Bacteroides coprosuis DSM 18011]
          Length = 444

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 48/116 (41%), Gaps = 9/116 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
               +  V     + + +  +  +         V VVD+  +L+G+       +      
Sbjct: 137 MATEMVKVNENLSMPECLKEMRAQAEELDEIHYVYVVDDDDRLQGVFP----LKKVITSP 192

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   V+ VM K+P  +  DT L    Q++ ++++  L VVD   +  GI+   D++
Sbjct: 193 SVSKVKHVMKKDPISVKVDTPLDEVAQIIEKYDLVALPVVDSIGRLAGIITVDDVM 248



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 216 LFVCASDVMHSGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                S V H     P+ VK+  PL +   I+ +     + VVD   +L GIIT  D+ 
Sbjct: 190 TSPSVSKVKHVMKKDPISVKVDTPLDEVAQIIEKYDLVALPVVDSIGRLAGIITVDDVM 248


>gi|85713919|ref|ZP_01044908.1| putative inosine-5'-monophosphate dehydrogenase protein
           [Nitrobacter sp. Nb-311A]
 gi|85699045|gb|EAQ36913.1| putative inosine-5'-monophosphate dehydrogenase protein
           [Nitrobacter sp. Nb-311A]
          Length = 144

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/112 (18%), Positives = 45/112 (40%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLN-TL 283
               + +      +  A  ++ +   G + V  E  +L G+IT+ DI  R   +      
Sbjct: 7   MTRDVRVANANETIEQAARLMFDLDAGALPV-GENNRLVGMITDRDIAMRAVAQGKGPQT 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V +VM  + K   +D  +      +    +  L V++  ++ +GI+   D+
Sbjct: 66  KVREVMTDDVKYCFDDQNIDEVTHNMGDIQVRRLPVLNRDKQLVGILSLGDI 117



 Score = 43.0 bits (100), Expect = 0.076,   Method: Composition-based stats.
 Identities = 9/53 (16%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + V++ M ++ +V   +  +  A +L+   +   L V  +  + +G++   D+
Sbjct: 1   MQVQEAMTRDVRVANANETIEQAARLMFDLDAGALPV-GENNRLVGMITDRDI 52


>gi|237858964|gb|ACR23663.1| inosine 5'-monophosphate dehydrogenase [Cryptococcus neoformans]
 gi|237858966|gb|ACR23664.1| inosine 5'-monophosphate dehydrogenase [Cryptococcus neoformans]
          Length = 544

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 16/172 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIAL            ++H              V    +    
Sbjct: 80  NTPFLSSPMDTVTEDRMAIALALHGGLG-----IIHHNCSAEEQAAMVRRVKKYENGFIT 134

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFHKDLNTLSV 285
                     + D + I ++  F  V + +      KL GI+T  D+            +
Sbjct: 135 DPLCLGPDATVGDVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDV----QFQDAETPI 190

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + VM            L  A  LLR+     L +VD     + +V   DLL+
Sbjct: 191 KSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLK 242


>gi|149177806|ref|ZP_01856405.1| putative chloride channel [Planctomyces maris DSM 8797]
 gi|148843296|gb|EDL57660.1| putative chloride channel [Planctomyces maris DSM 8797]
          Length = 622

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/119 (24%), Positives = 47/119 (39%), Gaps = 4/119 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
             SDV   G  I L+     L + +  L+  +     VVD   ++ GI +E D+    + 
Sbjct: 482 RVSDVFDPGRKIQLIHQSKTLDEIVHSLAGTQQHYFPVVDNEGRIIGIFSEDDVRAYLYD 541

Query: 279 D--LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFL 333
           +         D+M  N   +  D  L   MQ     N+  L VVD  D    +G+++  
Sbjct: 542 ETIWKLALARDIMQSNFVKVRPDDDLNTVMQRFTAINVEALPVVDQEDSGILLGMLNRK 600


>gi|325685679|gb|EGD27759.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Lactobacillus delbrueckii
           subsp. lactis DSM 20072]
          Length = 415

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  L +AI+++ ++R   + V D+   LKG I   D+     +  +  SV D+   +
Sbjct: 268 ITPGKSLAEAISLMRKRRVDTLLVTDDENHLKGFI---DLESLGTRYQSATSVGDITKSS 324

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + ++ LL      + +     + VVD+ QK +GIV 
Sbjct: 325 IFYVNKNALLRDTADRILKRGFKYVPVVDNDQKLVGIVT 363



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      +  +VE +M+KNP  I     L  A+ L+R+  +  L+V DD     G +  
Sbjct: 246 RLVRARADVTTVEQIMLKNPAAITPGKSLAEAISLMRKRRVDTLLVTDDENHLKGFIDL 304


>gi|282898858|ref|ZP_06306845.1| Cl- channel, voltage gated [Cylindrospermopsis raciborskii CS-505]
 gi|281196385|gb|EFA71295.1| Cl- channel, voltage gated [Cylindrospermopsis raciborskii CS-505]
          Length = 626

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 15/119 (12%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------- 278
                 +     +++A   +         V+D  +KL GI++  DI R   +        
Sbjct: 482 HFHPKKIPANLSVLEAALEMIHDHVPSALVIDANEKLVGIVSLDDINRTLSRWENYQTPS 541

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIV 330
                D    ++ D+   +     +D  L+ A+  +    +  L V+D       +G++
Sbjct: 542 DQLKPDFFGQTILDICTTDILYAWQDEPLSEALDRMALRGLQQLPVLDRDNPDCIVGLL 600



 Score = 43.3 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + T SV + +  +PK I  +  +  A   +   ++   +V+D  +K +GIV   D+ R
Sbjct: 472 IQTTSVAEAIHFHPKKIPANLSVLEAALEMIHDHVPSALVIDANEKLVGIVSLDDINR 529


>gi|257884979|ref|ZP_05664632.1| sugar isomerase [Enterococcus faecium 1,231,501]
 gi|257820817|gb|EEV47965.1| sugar isomerase [Enterococcus faecium 1,231,501]
          Length = 185

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 77/190 (40%), Gaps = 18/190 (9%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           + A ++I+ E      +  +L    S      ++KI+  + RV   G+G+       +A 
Sbjct: 4   KAAKQNIVRE------ITETLDRISSKDVEQLIKKIEKAE-RVFFVGVGRVLLALEGMAK 56

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G  +  V            IT  DL+IV S SG S     I   A+ F   +  I
Sbjct: 57  RLGHLGIQTVVVGQITEP-----AITDKDLLIVGSGSGESAFPLTIAKKAKEFGSQVAHI 111

Query: 145 TSENKSVVACHADIVLTLPKEPE----SCPHGLAPTTSAIMQLA--IGDALAIALLESRN 198
            S   S +  ++D+ + +P + +         + P TS   Q    +GD++A+ ++E + 
Sbjct: 112 GSNPDSTMKEYSDLFIRIPVQTKLALPEEISSIQPMTSLFEQSVLLLGDSIALVMIEEKA 171

Query: 199 FSENDFYVLH 208
              +  +  H
Sbjct: 172 IDMSKLWQYH 181


>gi|254388968|ref|ZP_05004199.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294814904|ref|ZP_06773547.1| CBS domain protein [Streptomyces clavuligerus ATCC 27064]
 gi|326443278|ref|ZP_08218012.1| hypothetical protein SclaA2_19533 [Streptomyces clavuligerus ATCC
           27064]
 gi|197702686|gb|EDY48498.1| conserved hypothetical protein [Streptomyces clavuligerus ATCC
           27064]
 gi|294327503|gb|EFG09146.1| CBS domain protein [Streptomyces clavuligerus ATCC 27064]
          Length = 134

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFH--KDLNTLSVEDVM 289
           +     L  A  +++ +R G   V+D + +   GI+TE DI  +    +D +  +     
Sbjct: 14  IGPAHTLRQAARLMAARRVGAAVVLDGDNEGGPGILTERDILTSVGAGQDPDQETAGAHT 73

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +         L  A + +       L+V+D     +G+V   D++R
Sbjct: 74  TTDVVYAAPSWTLDEAAEAMSHGGFRHLIVLDGHG-PVGVVSVRDIIR 120



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 3/54 (5%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIVHFLDLL 336
           V D M      I     L  A +L+    +   +V+D   +    GI+   D+L
Sbjct: 3   VRDAMSTMVLTIGPAHTLRQAARLMAARRVGAAVVLDGDNEGGP-GILTERDIL 55


>gi|253701619|ref|YP_003022808.1| hypothetical protein GM21_3021 [Geobacter sp. M21]
 gi|251776469|gb|ACT19050.1| CBS domain containing membrane protein [Geobacter sp. M21]
          Length = 149

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/139 (16%), Positives = 56/139 (40%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V+    + D   + ++ R   V VVD+   L GI++E D+             
Sbjct: 8   MTKEVITVRRDTTVRDLAQLFAQHRISTVPVVDDQGLLVGIVSESDLIEQDKNLHIPTVV 67

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F K+L  +   +V ++  +    +  ++ ++    ++    I  + 
Sbjct: 68  SIFDWVIYLESDKRFEKELQKMTAQTVGEIYAEEVFSVGPESPVSEVADIMTSKRIQAVP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV + ++ +GI+  +D++R
Sbjct: 128 VV-EGRRVVGIIGRIDMVR 145



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 21/54 (38%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +D+M K    +  DT +    QL  QH IS + VVDD    +GIV   DL+
Sbjct: 2   LKAKDIMTKEVITVRRDTTVRDLAQLFAQHRISTVPVVDDQGLLVGIVSESDLI 55


>gi|227518387|ref|ZP_03948436.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX0104]
 gi|307288563|ref|ZP_07568547.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|227074065|gb|EEI12028.1| cystathionine beta-synthase (CBS) domain protein [Enterococcus
           faecalis TX0104]
 gi|306500470|gb|EFM69803.1| CBS domain pair protein [Enterococcus faecalis TX0109]
 gi|315165543|gb|EFU09560.1| CBS domain pair protein [Enterococcus faecalis TX1302]
          Length = 162

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGII--TE-----GDIFRNFHKDLNTLSVEDVMI 290
           PL  A  +LS+ R+  + V+D+G +  G+I  T+      D+     + LN  +V DVM 
Sbjct: 32  PLSHAALVLSKVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEKLNEFTVADVME 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N  VI E   L   + LL     S L VVDD Q+  GI+   ++L+ 
Sbjct: 92  VNVPVIGESWDLEEVLHLLVDA--SFLPVVDDNQRFKGIITRKEILKA 137


>gi|118576164|ref|YP_875907.1| hemolysin [Cenarchaeum symbiosum A]
 gi|118194685|gb|ABK77603.1| hemolysin [Cenarchaeum symbiosum A]
          Length = 418

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/129 (18%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ-KLKGIITE 269
           G LG        VM     +  +     L +A+ +++++    + ++ EG  ++ G +  
Sbjct: 192 GALGFDDTIIRAVMTPRTRMFTLNAKMLLFEALPLINQRGHSRIPILGEGGNEIVGFVHA 251

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           GDI +    D   +++E +  + P  + ++  ++  ++ ++   + + MV+D+    +G+
Sbjct: 252 GDILKELEHDKRVVTLEQIA-RKPVFVSQEKRVSSLLKEMQGRKVHMAMVIDEHGGIVGL 310

Query: 330 VHFLDLLRF 338
           V   DLL  
Sbjct: 311 VTLEDLLEE 319



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 19/135 (14%), Positives = 44/135 (32%), Gaps = 16/135 (11%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                   +         V     +   +  +  ++     V+DE   + G++T  D+  
Sbjct: 259 EHDKRVVTLEQIARKPVFVSQEKRVSSLLKEMQGRKVHMAMVIDEHGGIVGLVTLEDLLE 318

Query: 275 NFHKDLNTLSVEDVMIKNP---KVILEDTLLTVAMQLLRQHNISVLMVVD-----DCQKA 326
               ++   + +      P     I  DT++T     +  + I+ +   D     D    
Sbjct: 319 EIVGEIEDETDK----TRPQEYHSIDRDTIITS--GDIEINRINEIFKADVPEGEDYASL 372

Query: 327 IGIVH--FLDLLRFG 339
            G++H    D+ + G
Sbjct: 373 SGLLHERLHDIPQEG 387


>gi|52840978|ref|YP_094777.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
 gi|52628089|gb|AAU26830.1| hypothetical protein lpg0741 [Legionella pneumophila subsp.
           pneumophila str. Philadelphia 1]
          Length = 174

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLN--T 282
               I  +     + + I  + EK  G + V D    L GI++E DI R  FHK L+  T
Sbjct: 42  PPRKIAYIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKSLSLET 101

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV+  N  ++     +  AMQ++ +     +++  +  + + I+   DLL
Sbjct: 102 AKVSDVVYTNVTILSPHDSVEKAMQVITETKRRHVLI-QEEGELLAILSIGDLL 154



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  D  +   ++ + + +I  L+V D+    IGIV   D+LR
Sbjct: 48  YIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILR 90


>gi|113970384|ref|YP_734177.1| DNA-binding transcriptional regulator HexR [Shewanella sp. MR-4]
 gi|114047424|ref|YP_737974.1| DNA-binding transcriptional regulator HexR [Shewanella sp. MR-7]
 gi|117920596|ref|YP_869788.1| DNA-binding transcriptional regulator HexR [Shewanella sp. ANA-3]
 gi|113885068|gb|ABI39120.1| transcriptional regulator, RpiR family [Shewanella sp. MR-4]
 gi|113888866|gb|ABI42917.1| transcriptional regulator, RpiR family [Shewanella sp. MR-7]
 gi|117612928|gb|ABK48382.1| transcriptional regulator, RpiR family [Shewanella sp. ANA-3]
          Length = 284

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDVTAINKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIEIARLARENGAAVIGITAR-NSPLSMEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL   D LA      R     D
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRGPRFRD 264


>gi|328554591|gb|AEB25083.1| component of the acetoin degradation regulation pathway [Bacillus
           amyloliquefaciens TA208]
 gi|328912995|gb|AEB64591.1| component of the acetoin degradation regulation pathway [Bacillus
           amyloliquefaciens LL3]
          Length = 215

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 43/121 (35%), Gaps = 10/121 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-----FHKD- 279
               +  V     +  A+  +       + V DE   + GI+T+ DI +      F ++ 
Sbjct: 7   MKRDVITVTKNDSIETAVRKMKAYHIRHLPVTDEDLHVAGIVTDRDIKQAGPDSSFEQED 66

Query: 280 ---LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                T  VE +M +N         +        +H I  L +     K  GI+   D+L
Sbjct: 67  RGAFLTNKVETIMKRNVICAHPLDFVEEISASFYEHGIGCLPIT-VNNKLTGILTKTDVL 125

Query: 337 R 337
           R
Sbjct: 126 R 126



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 28/55 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            E +M ++   + ++  +  A++ ++ ++I  L V D+     GIV   D+ + G
Sbjct: 3   AEQIMKRDVITVTKNDSIETAVRKMKAYHIRHLPVTDEDLHVAGIVTDRDIKQAG 57


>gi|311032146|ref|ZP_07710236.1| transcriptional regulator [Bacillus sp. m3-13]
          Length = 286

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/186 (19%), Positives = 73/186 (39%), Gaps = 8/186 (4%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           + +V   + S+   +  + ++ +++      +   A+E I   +  V + GIG SG I  
Sbjct: 93  DDSVSSMIHSVS--QNNIQAIHNTVGVLDEAELEKAIELISKAR-IVAVYGIGASGLIAM 149

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                L          +  +        ++  D+   +S+SG + ++   L  A+     
Sbjct: 150 DFKQKLTRINRWCEAAYDKDTQVTIAANLSETDVAFGISYSGHTKDIIESLKVAKENGAS 209

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL---AIALLESR 197
           +I +T   ++  +  AD+ L       +   G   T+S I QL + D L    + L + R
Sbjct: 210 VITLTRSGENPTSAIADVKLNTTSLERNVRSGA--TSSRIAQLNVIDILFFGVMKLDQER 267

Query: 198 NFSEND 203
           N    D
Sbjct: 268 NIKALD 273


>gi|257063410|ref|YP_003143082.1| IMP dehydrogenase/GMP reductase [Slackia heliotrinireducens DSM
           20476]
 gi|256791063|gb|ACV21733.1| IMP dehydrogenase/GMP reductase [Slackia heliotrinireducens DSM
           20476]
          Length = 506

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/169 (21%), Positives = 59/169 (34%), Gaps = 12/169 (7%)

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASD 222
           E E       P  SAIM     D +A+AL       F   +  +      +  +    + 
Sbjct: 44  EEECPISLNVPMVSAIMAAVSDDNMAVALATEGGMSFIYGNQTIEQEAAMVARVKAYKAG 103

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKD 279
            + S  ++        L   + +  +     + V  +G    KL GI+TE D      + 
Sbjct: 104 FVESDSNL---SPEMTLGQVVELKEKTGHSTMPVTSDGTGTGKLLGIVTERDYR--LSRM 158

Query: 280 LNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
              L V + M          E T L VA  ++  H ++ L +VDD    
Sbjct: 159 SLDLPVSEFMTPLEKLVTATEGTSLKVANDIIWDHKLNSLPIVDDEGNL 207


>gi|324115302|gb|EGC09266.1| SIS domain-containing protein [Escherichia fergusonii B253]
          Length = 287

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 37/179 (20%), Positives = 63/179 (35%), Gaps = 13/179 (7%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
           +  +  +   +R L                 AV  +   +  + +   G S     ++  
Sbjct: 99  ESIISVLETHRRSLDM----------NAISQAVSWLSQARQILALGTGGGSTICSQEIQY 148

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G P    + A         +   D++IVLS  G + E+      AR++   +IAI
Sbjct: 149 RLFRLGLPVVSQNDALMMRMMCSAVMPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAI 208

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           T   ++ +A   D+VL L  +         P  S    LA+ D LA  L  +      D
Sbjct: 209 TP-AQTPLAEQVDLVLPLLVQESDYIFKPTP--SRYAMLAMVDVLATELAMANKAQAKD 264


>gi|237837745|ref|XP_002368170.1| inosine-5'-monophosphate dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|211965834|gb|EEB01030.1| inosine-5'-monophosphate dehydrogenase, putative [Toxoplasma gondii
           ME49]
 gi|221509065|gb|EEE34634.1| inosine-5'-monophosphate dehydrogenase, putative [Toxoplasma gondii
           VEG]
          Length = 551

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLF 217
           + L        H   P  S+ M       +AI  AL+       N+        ++  + 
Sbjct: 37  VDLSTRITRNLHVRTPIVSSPMDTVTEHRMAIGCALMGGMGVIHNNMETARQVAEVQKVK 96

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFR 274
              +  +       +++    + D   I  +  +  V + D G    KL GI+T  DI  
Sbjct: 97  RYENGFI---LDPFVLRPSDSVADVYRIKEKYGYSSVPITDTGMLGGKLLGIVTSRDI-- 151

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +F  D++T  + +VM  +  V  E   L  A +LLR+     L +V+D  + + ++   D
Sbjct: 152 DFLTDVHT-PLSEVMTSDLVVGHEPVQLAEANELLRESKKGKLPIVNDNFELVALISRND 210

Query: 335 LLR 337
           L +
Sbjct: 211 LKK 213


>gi|169595366|ref|XP_001791107.1| hypothetical protein SNOG_00421 [Phaeosphaeria nodorum SN15]
 gi|160701080|gb|EAT91916.2| hypothetical protein SNOG_00421 [Phaeosphaeria nodorum SN15]
          Length = 554

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/188 (20%), Positives = 59/188 (31%), Gaps = 17/188 (9%)

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTL 216
           D+ L  P           P  S+ M       +AI +            V+H        
Sbjct: 77  DVNLDTPITKRITL--KTPFVSSPMDTVTEHNMAIHIALLGGLG-----VIHHNCSQDDQ 129

Query: 217 FVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITE 269
                 V    +   L    +     + +A  +     FG   V ++G    KL GIIT 
Sbjct: 130 AEMVRKVKRFENGFILDPVVISPTTTVAEAKALKERWGFGGFPVTEDGSLRSKLVGIITP 189

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            DI  +   D     V  VM  +         L  A  +L +     L +VD     I +
Sbjct: 190 RDIQFH---DKLDDPVTAVMSTDLVTAPYGIDLKEANDILNKSKKGKLPIVDGDFNLIAL 246

Query: 330 VHFLDLLR 337
           +   DL++
Sbjct: 247 LSRSDLMK 254


>gi|197117650|ref|YP_002138077.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
 gi|197087010|gb|ACH38281.1| CBS domain pair-containing protein [Geobacter bemidjiensis Bem]
          Length = 149

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 57/139 (41%), Gaps = 28/139 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               +  V+    + D   + ++ R   V VVDEG  L GI++E D+             
Sbjct: 8   MTKEVITVRRDTTVRDLAQLFAQHRISTVPVVDEGGLLVGIVSESDLIEQDKNLHIPTVV 67

Query: 274 ------------RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                       + F K+L  +   +V ++  +    +  ++ ++    ++    I  + 
Sbjct: 68  SIFDWVIYLESDKRFEKELQKMTAQTVGEIYAEEVFSVGPESPVSEVADIMTSKRIQAVP 127

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           VV + ++ +GI+  +D+++
Sbjct: 128 VV-EGRRVVGIIGRIDMVK 145



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 20/54 (37%), Positives = 28/54 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +D+M K    +  DT +    QL  QH IS + VVD+    +GIV   DL+
Sbjct: 2   LKAKDIMTKEVITVRRDTTVRDLAQLFAQHRISTVPVVDEGGLLVGIVSESDLI 55


>gi|304312662|ref|YP_003812260.1| CBS domain protein [gamma proteobacterium HdN1]
 gi|301798395|emb|CBL46619.1| CBS domain protein [gamma proteobacterium HdN1]
          Length = 144

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/128 (16%), Positives = 47/128 (36%), Gaps = 14/128 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRN--------- 275
              ++        +  A  ++++K    + VV  E  +  G+IT+ ++ R+         
Sbjct: 11  MTRNVYTCTEADSVSSAHRLMTQKGIRHLPVVSSETGEFVGVITQKELLRHAFGVVASVG 70

Query: 276 ---FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                +      + DVM ++ + I     L  A +         L VV    + +GI+  
Sbjct: 71  IAELERAGENRKIADVMTRDVETIQPQLPLREAGKFFVACKHGCLPVV-VDGRLLGILTS 129

Query: 333 LDLLRFGI 340
            D ++  +
Sbjct: 130 ADFVKLSV 137



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLLR--FGII 341
           E++M +N     E   ++ A +L+ Q  I  L VV  +  + +G++   +LLR  FG++
Sbjct: 8   EEIMTRNVYTCTEADSVSSAHRLMTQKGIRHLPVVSSETGEFVGVITQKELLRHAFGVV 66


>gi|291300343|ref|YP_003511621.1| RpiR family transcriptional regulator [Stackebrandtia nassauensis
           DSM 44728]
 gi|290569563|gb|ADD42528.1| transcriptional regulator, RpiR family [Stackebrandtia nassauensis
           DSM 44728]
          Length = 316

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 6/169 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
             + AE   L    +SL  +   +   AV   + +     + GIG S  +  +L   L  
Sbjct: 117 HVLTAEITALQDTAASLDLDGVARVAEAVAAARRVD----MYGIGGSALVVGELHMGLHR 172

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G P++  +   ++     ++TR+D+ I  S SG++ E   +L  A       +A+TS  
Sbjct: 173 IGIPAWVWNEVHSALASAALLTREDVAIGFSHSGATVETVEMLAEAGSHGALTVAVTSYP 232

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            S +   +DIVLT      +    +    +   QL + DAL +A+ + R
Sbjct: 233 SSPITEVSDIVLTSATRANNSQSDVL--AARHSQLLVSDALYLAVAQRR 279


>gi|291278792|ref|YP_003495627.1| nucleoside-diphosphate-sugar pyrophosphorylase [Deferribacter
           desulfuricans SSM1]
 gi|290753494|dbj|BAI79871.1| nucleoside-diphosphate-sugar pyrophosphorylase [Deferribacter
           desulfuricans SSM1]
          Length = 363

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 56/119 (47%), Gaps = 4/119 (3%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHK-DLN 281
                  L++     I A+  L+E     + V++    +KL G IT+GDI R+  K    
Sbjct: 1   MKNLEKVLIEKKSSAISALKQLNESSTKVLIVIENLKSKKLVGTITDGDIRRHILKAGFI 60

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQ-LLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             +V DV  KNP  I++D L    ++ L+    + ++ VV++  + I  + + D L+  
Sbjct: 61  EGNVYDVCNKNPIYIIKDKLDKEIIKNLILNKKLELIPVVNEKNEVIDYIEWSDFLKEK 119


>gi|238882400|gb|EEQ46038.1| inosine-5'-monophosphate dehydrogenase IMD2 [Candida albicans WO-1]
          Length = 521

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            +P  S+ M     + +AI  ALL       ++         +  +    +  +   +  
Sbjct: 67  KSPFVSSPMDTVTEENMAIHMALLGGIGIIHHNCTAEEQAEMVRKVKKYENGFI---NDP 123

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +   +     F    V + G    KL GIIT  DI   FH+D N   V +
Sbjct: 124 VVISPEVTVGEVKKMGEVLGFTSFPVTENGKVGGKLVGIITSRDI--QFHED-NKSPVSE 180

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K+  V  +   LT   +LLR      L +VD     + ++   DL +
Sbjct: 181 VMTKDLVVGKKGISLTDGNELLRSSKKGKLPIVDAEGNLVSLISRTDLQK 230


>gi|237744402|ref|ZP_04574883.1| CBS domain-containing protein [Fusobacterium sp. 7_1]
 gi|260494044|ref|ZP_05814175.1| CBS domain-containing protein [Fusobacterium sp. 3_1_33]
 gi|229431631|gb|EEO41843.1| CBS domain-containing protein [Fusobacterium sp. 7_1]
 gi|260198190|gb|EEW95706.1| CBS domain-containing protein [Fusobacterium sp. 3_1_33]
          Length = 199

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/121 (24%), Positives = 49/121 (40%), Gaps = 6/121 (4%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G           V         + I   + DAI  L     G + VV E +KL GII+  
Sbjct: 56  GYSYNNKCTTIKVRDCMSPQNSIDIRTSVYDAIIHLFNYDLGTLVVV-ENEKLVGIISRK 114

Query: 271 DIFRNF--HKDLNTLSVEDVMIKNPKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQK 325
           D+ +     K++    V  +M + P ++   ED  +  A++ L +H I  L V+  +  K
Sbjct: 115 DLLKATLNKKNIEKTPVSMIMTRMPNIVHCFEDDNIIEAIEKLIKHEIDSLPVLRKEKGK 174

Query: 326 A 326
            
Sbjct: 175 L 175


>gi|110667608|ref|YP_657419.1| CBS domain-containing protein [Haloquadratum walsbyi DSM 16790]
 gi|109625355|emb|CAJ51778.1| CBS domain protein / probable chromosome partitioning protein
           [Haloquadratum walsbyi DSM 16790]
          Length = 260

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/122 (19%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +   A+   +    +  V     + D    +          V EG+ ++G++T  D+   
Sbjct: 1   MSEKATVNEYMTQDVQTVSPTDTVADVAHQIKNSAGHTGFPVSEGRTVEGVVTACDLLLV 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
                +  ++  VM ++  V   D  +  A +++ +  I  L VVDD    +GI+   D+
Sbjct: 61  ----DDEAAIFTVMTEDIIVAHPDMAVVDAGRVILRSGIQKLPVVDDAGNLVGIISNTDV 116

Query: 336 LR 337
           +R
Sbjct: 117 VR 118



 Score = 39.1 bits (90), Expect = 0.89,   Method: Composition-based stats.
 Identities = 14/64 (21%), Positives = 27/64 (42%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
             + I +      ++DA  ++       + VVD+   L GII+  D+ R+  +      V
Sbjct: 70  MTEDIIVAHPDMAVVDAGRVILRSGIQKLPVVDDAGNLVGIISNTDVVRSQIERATPEKV 129

Query: 286 EDVM 289
             +M
Sbjct: 130 GKLM 133


>gi|70606546|ref|YP_255416.1| hypothetical protein Saci_0747 [Sulfolobus acidocaldarius DSM 639]
 gi|68567194|gb|AAY80123.1| conserved Prokaryal protein [Sulfolobus acidocaldarius DSM 639]
          Length = 222

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/163 (21%), Positives = 63/163 (38%), Gaps = 20/163 (12%)

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
           +   G++++ G G+SG +G      L   G   + +            I   D+ I +S 
Sbjct: 60  QNKNGKILVMGAGRSGLVGKAFGMRLLHLGYNVYVLGDTIVP-----AIGERDIAIAISG 114

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG-------- 172
           SG +  +      A+     LI+ITS   S +A  +D+V+ +P   +   +         
Sbjct: 115 SGRTRLILTAAEAAKAAKSTLISITSYADSPLAKISDVVVEIPGRTKYSTNEDYFARQIL 174

Query: 173 -----LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
                LAP  +          D L   L++  N +E D  ++H
Sbjct: 175 GITEPLAPLGTLFEDTTQIFLDGLVAELMKKLNKTEEDLRMIH 217


>gi|227355419|ref|ZP_03839815.1| hex regulon repressor (RpiR-family transcriptional regulator)
           [Proteus mirabilis ATCC 29906]
 gi|227164406|gb|EEI49290.1| hex regulon repressor (RpiR-family transcriptional regulator)
           [Proteus mirabilis ATCC 29906]
          Length = 280

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/167 (19%), Positives = 65/167 (38%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++ LE+          + AV+ +   + ++   G+G S  +     +  +    P  + 
Sbjct: 102 AMAGLETVKNNLDIAVINRAVDILTQAR-KISFFGLGASAAVAHDAMNKFSRFNIPVTYF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +IAIT+   S++A  A
Sbjct: 161 DDVIMQRMSCINSIDGDVVVIVSHTGRTKNLVEIAKIARENDASVIAITTSG-SLLAAEA 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + + L    ++  +   P  S + QL + D LA   +  R     D
Sbjct: 220 TLPILLDVPEDTDIY--MPMISRLAQLTVIDVLATGFILRRGPKFRD 264


>gi|119512845|ref|ZP_01631912.1| Phosphoesterase, RecJ-like [Nodularia spumigena CCY9414]
 gi|119462518|gb|EAW43488.1| Phosphoesterase, RecJ-like [Nodularia spumigena CCY9414]
          Length = 414

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/84 (26%), Positives = 34/84 (40%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
               +  ++    +  A +IL       ++VVD   KL GII+  DI    H   +   V
Sbjct: 321 MSSPVRTIRPETTISQAQSILLRYGHSGLSVVDTQGKLVGIISRRDIDIALHHGFSHAPV 380

Query: 286 EDVMIKNPKVILEDTLLTVAMQLL 309
           +  M    K I  DT+L     L+
Sbjct: 381 KGYMTTKVKTITPDTILPQIESLM 404



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +  D+M    + I  +T ++ A  +L ++  S L VVD   K +GI+   D+
Sbjct: 316 TARDLMSSPVRTIRPETTISQAQSILLRYGHSGLSVVDTQGKLVGIISRRDI 367


>gi|7920698|gb|AAF70813.1|AF249293_1 putative inosine 5-monophosphate dehydrogenase [Candida albicans]
 gi|267711962|gb|ACY78684.1| IMH3r [Cloning vector pNZ4]
          Length = 521

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            +P  S+ M     + +AI  ALL       ++         +  +    +  +   +  
Sbjct: 67  KSPFVSSPMDTVTEENMAIHMALLGGIGIIHHNCTAEEQAEMVRKVKKYENGFI---NDP 123

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +   +     F    V + G    KL GIIT  DI   FH+D N   V +
Sbjct: 124 VVISPEVTVGEVKKMGEVLGFTSFPVTENGKVGGKLVGIITSRDI--QFHED-NKSPVSE 180

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K+  V  +   LT   +LLR      L +VD     + ++   DL +
Sbjct: 181 VMTKDLVVGKKGISLTDGNELLRSSKKGKLPIVDAEGNLVSLISRTDLQK 230


>gi|20094526|ref|NP_614373.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887641|gb|AAM02303.1| CBS-domain-containing protein [Methanopyrus kandleri AV19]
          Length = 274

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 48/123 (39%), Gaps = 11/123 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD----EGQKLKGIITEGDIFRNF----- 276
              +   V     L  A+  + +++   + V +    + ++L GI+T  D          
Sbjct: 11  MSRNPVTVDADQSLKFALKTMRKRKVNRLPVTERVSEDRKELVGILTVLDAALAVADAMF 70

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +  + + V +VM      I     +  A Q +  H +S L V+D   + +G++   DL
Sbjct: 71  GDRSPSRIKVSEVMSSPVITISPGATVLDAAQTMLVHGVSGLPVLDGD-RLVGMITKTDL 129

Query: 336 LRF 338
           L  
Sbjct: 130 LEL 132



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 25/113 (22%), Positives = 49/113 (43%), Gaps = 5/113 (4%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                      +  +  G  ++DA   +       + V+D G +L G+IT+ D+      
Sbjct: 77  RIKVSEVMSSPVITISPGATVLDAAQTMLVHGVSGLPVLD-GDRLVGMITKTDLLELVRS 135

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +     V   M+K+P  +   T L  A +L+ + N  VL VV + ++ +G++ 
Sbjct: 136 EDY---VALHMVKDPITVSAGTSLLHARRLMFEENAKVLPVV-ERERLVGLLT 184



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 51/122 (41%), Gaps = 14/122 (11%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------ 278
           H       V  G  L+ A  ++ E+    + VV E ++L G++T+  +     +      
Sbjct: 142 HMVKDPITVSAGTSLLHARRLMFEENAKVLPVV-ERERLVGLLTDRTLALELARLREKSP 200

Query: 279 ------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                  L    V+DVM + P  +  D  L  A +L+ +  +  + VV+   + +G++  
Sbjct: 201 KGKFRSALKRARVDDVM-RTPISVRTDYGLVDAAELIVRKRVPGVPVVNYQDEVVGVITK 259

Query: 333 LD 334
            D
Sbjct: 260 TD 261



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV----DDCQKAIGIVH 331
           SVED+M +NP  +  D  L  A++ +R+  ++ L V     +D ++ +GI+ 
Sbjct: 6   SVEDLMSRNPVTVDADQSLKFALKTMRKRKVNRLPVTERVSEDRKELVGILT 57


>gi|332529546|ref|ZP_08405504.1| hypothetical protein HGR_06516 [Hylemonella gracilis ATCC 19624]
 gi|332041066|gb|EGI77434.1| hypothetical protein HGR_06516 [Hylemonella gracilis ATCC 19624]
          Length = 379

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 8/113 (7%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--------RNFHKDLNTLSV 285
           +    + DA   L   +   + VV + + L GI++  D F        R          V
Sbjct: 249 RPRDGVDDAWAQLITHKVKALPVVRDDKTLAGIVSLHDFFLAQSAPDPRKLPVMNTARHV 308

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +D+M +  +V      L   ++L     +  L VVD+  + +G++   D++  
Sbjct: 309 QDIMTRRVRVARPGQPLVELVELFSDGGLHHLPVVDEALRVVGMITQSDVVAA 361



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 22/57 (38%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +    L  ED+M ++         +  A   L  H +  L VV D +   GIV   D
Sbjct: 230 RQFGDLLCEDIMSRDVVAARPRDGVDDAWAQLITHKVKALPVVRDDKTLAGIVSLHD 286



 Score = 38.0 bits (87), Expect = 2.4,   Method: Composition-based stats.
 Identities = 18/77 (23%), Positives = 32/77 (41%), Gaps = 3/77 (3%)

Query: 203 DF--YVLHPGGKLGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDE 259
           DF      P  +   +   A  V         V + G PL++ + + S+     + VVDE
Sbjct: 286 DFFLAQSAPDPRKLPVMNTARHVQDIMTRRVRVARPGQPLVELVELFSDGGLHHLPVVDE 345

Query: 260 GQKLKGIITEGDIFRNF 276
             ++ G+IT+ D+    
Sbjct: 346 ALRVVGMITQSDVVAAL 362


>gi|325520023|gb|EGC99252.1| putative signal-transduction protein [Burkholderia sp. TJI49]
          Length = 151

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 51/108 (47%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L G++T  ++    H++   +  + V  VM
Sbjct: 17  VTPDKPLREAVDTMAEHDIGSL-VVMEYGDLVGMLTFREVILRLHENGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.1 bits (90), Expect = 1.1,   Method: Composition-based stats.
 Identities = 11/45 (24%), Positives = 24/45 (53%), Gaps = 2/45 (4%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD-LLRF 338
            +  D  L  A+  + +H+I  L+V+ +    +G++ F + +LR 
Sbjct: 16  TVTPDKPLREAVDTMAEHDIGSLVVM-EYGDLVGMLTFREVILRL 59


>gi|282163492|ref|YP_003355877.1| hypothetical protein MCP_0822 [Methanocella paludicola SANAE]
 gi|282155806|dbj|BAI60894.1| conserved hypothetical protein [Methanocella paludicola SANAE]
          Length = 152

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 52/113 (46%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
               +  +     + DA   + E   G V V+D+   +KGI+T+  I  N    +KD   
Sbjct: 7   MSKDVVTIGADASVADAARKMKEADVGSVVVLDKN-AVKGIVTDRKIVTNCIAENKDPGR 65

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + ++  K+     ED+ +  A+  L ++ I    VV+D ++ +G++   D+
Sbjct: 66  EHIGNITSKSMITCSEDSDVHDALMTLGKNKIRRCPVVNDRKELVGVLSVADI 118



 Score = 44.5 bits (104), Expect = 0.023,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 26/49 (53%), Gaps = 1/49 (2%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           + V+D+M K+   I  D  +  A + +++ ++  ++V+D      GIV 
Sbjct: 1   MKVKDIMSKDVVTIGADASVADAARKMKEADVGSVVVLDK-NAVKGIVT 48


>gi|159038754|ref|YP_001538007.1| RpiR family transcriptional regulator [Salinispora arenicola
           CNS-205]
 gi|157917589|gb|ABV99016.1| transcriptional regulator, RpiR family [Salinispora arenicola
           CNS-205]
          Length = 320

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/170 (20%), Positives = 63/170 (37%), Gaps = 6/170 (3%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
           + I A+ R +    + L      +   A   I     RV I G   S  +G ++   L  
Sbjct: 132 QIIAADTRAMHDTAALLD---LAEVERAAVAIAGAS-RVNIFGASGSALVGEEMQFMLHR 187

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  ++             ++   D+ + +S SG + E   +L  A       +A+T   
Sbjct: 188 IGVAAWAWSDVHEGLASAALLRVGDVALGVSHSGQTRETIEMLAEAGSRGATTVAVTGFP 247

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           +S +A  ADI L       +        ++   QL + D L IA+ +  +
Sbjct: 248 RSPLAELADIALLT--ASRATTFRPDALSARHPQLVVLDLLYIAVAQRTH 295


>gi|319936777|ref|ZP_08011189.1| RpiR family transcriptional regulator [Coprobacillus sp. 29_1]
 gi|319808045|gb|EFW04617.1| RpiR family transcriptional regulator [Coprobacillus sp. 29_1]
          Length = 257

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 77/184 (41%), Gaps = 7/184 (3%)

Query: 21  NSTVQCALRSIIA--EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
            S VQ     +    E   ++ L+ + +       + A + +K  K  V+  G G S  I
Sbjct: 67  QSYVQSQQEKLKKVDETIFINFLQRTNEALFQKNINDATQLLKE-KELVLFVGHGSSNII 125

Query: 79  GSKLASTLASTGTPSFFV-HAAEASHGDL-GMITRDDLIIVLSWSGSSDELKAILYYARR 136
               A   +S  + +  V + A      +   I+    +IVLS SG ++E+   L + +R
Sbjct: 126 AEYGALYFSSLCSVALSVENPANYPINFIYQNISSKICVIVLSVSGETEEIIEYLQHFKR 185

Query: 137 FSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            +  +I IT+  KS +A  +D+ +      ES        TS +  L   + LA  +  +
Sbjct: 186 NNSSIICITNSTKSTIAKLSDVCIPYYITEESFEGSNI--TSQVPALYTVEYLARQVHSA 243

Query: 197 RNFS 200
           + ++
Sbjct: 244 KFYT 247


>gi|152980245|ref|YP_001354004.1| RpiR family transcriptional regulator [Janthinobacterium sp.
           Marseille]
 gi|151280322|gb|ABR88732.1| transcriptional regulator, RpiR family [Janthinobacterium sp.
           Marseille]
          Length = 286

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/192 (17%), Positives = 69/192 (35%), Gaps = 13/192 (6%)

Query: 8   FKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR- 66
               T     ++++       +        L  L +SL          A+E+   + GR 
Sbjct: 75  LAPGTGDESPMLEDMAADLVDKVCNRSINTLLDLRNSLDAN-------AIEQALQVLGRA 127

Query: 67  --VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
             +   G G SG I +        +G P+              ++ + D+++ +S  GSS
Sbjct: 128 NTIEFYGQGTSGIIAADAQHKFFRSGVPTVAYSDPHIHSIAASLLKKGDVVVAISQRGSS 187

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
             L   +  AR     ++ +       +A  A +++ +     + P+   P ++ +  L 
Sbjct: 188 LSLLRSVQLARSSGAAIVVLAPSGT-PLAELATVLIPIDLHFHTDPY--TPISARLAHLV 244

Query: 185 IGDALAIALLES 196
           + D LA+ L   
Sbjct: 245 VIDILAVGLALR 256


>gi|254303818|ref|ZP_04971176.1| hypothetical protein FNP_1478 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
 gi|148324010|gb|EDK89260.1| hypothetical protein FNP_1478 [Fusobacterium nucleatum subsp.
           polymorphum ATCC 10953]
          Length = 198

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/157 (22%), Positives = 61/157 (38%), Gaps = 14/157 (8%)

Query: 183 LAIGDALAIALLESRNFSENDFYVL--------HPGGKLGTLFVCASDVMHSGDSIPLVK 234
              GD +A  L  +++    DF +L                       V         + 
Sbjct: 19  SLSGDEIAQNLNVTKSALRTDFSILTGLKLITAKQNKGYTYNKCTIKRVRDCMSPQNSIS 78

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
           +   + DAI  L     G + VV E +KL GII+  D+ +     K++  + V  +M + 
Sbjct: 79  VKTSVYDAIIHLFNFDLGTLIVV-ENEKLVGIISRKDLLKAALNRKNIEKIPVSIIMTRM 137

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQKA 326
           P ++   ED  +  A++ L +H I  L V+  +  K 
Sbjct: 138 PNIVHCFEDDNIMEAIEKLIKHEIDSLPVLRKEKGKL 174


>gi|187927141|ref|YP_001897628.1| CBS domain-containing membrane protein [Ralstonia pickettii 12J]
 gi|187724031|gb|ACD25196.1| CBS domain containing membrane protein [Ralstonia pickettii 12J]
          Length = 382

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 34/62 (54%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + +    L+  D+M      +L  T +  A++LLRQH    L VVD+ ++ +GIV  +D
Sbjct: 231 AYTRTFQALTCADIMTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTRVD 290

Query: 335 LL 336
           LL
Sbjct: 291 LL 292



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 49/124 (39%), Gaps = 13/124 (10%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD------------IF 273
               +  V  G  +  A+ +L +  F  + VVDEG+++ GI+T  D            + 
Sbjct: 245 MTTPVVTVLAGTSIPRALELLRQHGFKALPVVDEGRRVVGIVTRVDLLGLAPADMRQTLR 304

Query: 274 RNFHKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R F     T   V D M    + I  +  ++  + +        + V+D   +  GIV  
Sbjct: 305 RWFSIGALTPPRVADHMKTRVQTIAANAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTE 364

Query: 333 LDLL 336
            DL+
Sbjct: 365 SDLV 368



 Score = 40.7 bits (94), Expect = 0.30,   Method: Composition-based stats.
 Identities = 12/57 (21%), Positives = 25/57 (43%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           H    +  +    P+ D + + +      + V+D   +L GI+TE D+    ++  N
Sbjct: 320 HMKTRVQTIAANAPMSDLVPMFASAGHHHIPVLDADGRLAGIVTESDLVGGLYRQAN 376


>gi|66737365|gb|AAV73841.1| inosine 5'monophosphate dehydrogenase short form [Toxoplasma
           gondii]
          Length = 371

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLF 217
           + L        H   P  S+ M       +AI  AL+       N+        ++  + 
Sbjct: 37  VDLSTRITRNLHVRTPIVSSPMDTVTEHRMAIGCALMGGMGVIHNNMETARQVAEVQKVK 96

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFR 274
              +  +       +++    + D   I  +  +  V + D G    KL GI+T  DI  
Sbjct: 97  RYENGFI---LDPFVLRPSDSVADVYRIKEKYGYSSVPITDTGMLGGKLLGIVTSRDI-- 151

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +F  D++T  + +VM  +  V  E   L  A +LLR+     L +V+D  + + ++   D
Sbjct: 152 DFLTDVHT-PLSEVMTSDLVVGHEPVQLAEANELLRESKKGKLPIVNDNFELVALISRND 210

Query: 335 LLR 337
           L +
Sbjct: 211 LKK 213


>gi|52840992|ref|YP_094791.1| pyridoxal phosphate-dependent enzyme apparently involved in
           regulation of cell wall biosynthesis [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|54296782|ref|YP_123151.1| hypothetical protein lpp0821 [Legionella pneumophila str. Paris]
 gi|148360591|ref|YP_001251798.1| cell wall biosynthesis regulatory pyridoxal phosphate-dependent
           protein [Legionella pneumophila str. Corby]
 gi|296106343|ref|YP_003618043.1| pyridoxal phosphate-dependent enzyme [Legionella pneumophila
           2300/99 Alcoy]
 gi|52628103|gb|AAU26844.1| pyridoxal phosphate-dependent enzyme apparently involved in
           regulation of cell wall biosynthesis [Legionella
           pneumophila subsp. pneumophila str. Philadelphia 1]
 gi|53750567|emb|CAH11969.1| hypothetical protein lpp0821 [Legionella pneumophila str. Paris]
 gi|148282364|gb|ABQ56452.1| pyridoxal phosphate-dependent enzyme apparently involved in
           regulation of cell wall biosynthesis [Legionella
           pneumophila str. Corby]
 gi|295648244|gb|ADG24091.1| pyridoxal phosphate-dependent enzyme [Legionella pneumophila
           2300/99 Alcoy]
 gi|307609551|emb|CBW99051.1| hypothetical protein LPW_08361 [Legionella pneumophila 130b]
          Length = 500

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 48/98 (48%), Gaps = 1/98 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           L  A++ L     G + +VD  + L   +T+GDI R   K      ++E++   + K + 
Sbjct: 15  LKTALSKLDATAQGVLFLVDSDEHLIRTVTDGDIRRLLLKGFTLDSTLEELSEHSSKALP 74

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  A  L++++ +  + V+D+  + I ++H  +L
Sbjct: 75  VSATIQDAYHLMQEYELDHIPVIDESNRPIRLIHRREL 112


>gi|120598951|ref|YP_963525.1| DNA-binding transcriptional regulator HexR [Shewanella sp. W3-18-1]
 gi|146292963|ref|YP_001183387.1| DNA-binding transcriptional regulator HexR [Shewanella putrefaciens
           CN-32]
 gi|120559044|gb|ABM24971.1| transcriptional regulator, RpiR family [Shewanella sp. W3-18-1]
 gi|145564653|gb|ABP75588.1| transcriptional regulator, RpiR family [Shewanella putrefaciens
           CN-32]
 gi|319426507|gb|ADV54581.1| transcriptional regulator, HexR [Shewanella putrefaciens 200]
          Length = 284

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDVSAINKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIEIARLARENGAAVIGITAR-NSPLSMEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL   D LA      R     D
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRGPRFRD 264


>gi|226948963|ref|YP_002804054.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A2 str. Kyoto]
 gi|226841403|gb|ACO84069.1| glycine betaine/L-proline ABC transporter, ATP-binding protein
           [Clostridium botulinum A2 str. Kyoto]
          Length = 381

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/106 (29%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L+ A  I+ +K+   + V+D+ + L G I   DI +   KD     V
Sbjct: 258 MITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERILLGYIKLEDIQKIKEKDKL---V 314

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E+VM K PK +LEDT L   +          L V D   K +G++ 
Sbjct: 315 EEVMNKEPKYVLEDTSLPELLDKFNNLKRGYLPVRDSEGKLLGLIT 360



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 26/55 (47%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            EDVMI  P  +     L  A +++R   +  L+V+D  +  +G +   D+ +  
Sbjct: 254 AEDVMITKPITVTPRRNLLQAREIMRDKKVDSLLVIDKERILLGYIKLEDIQKIK 308


>gi|190347778|gb|EDK40117.2| hypothetical protein PGUG_04215 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 521

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 7/189 (3%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +   A   ++L  +        +P  SA M     + +AI +           +   P  
Sbjct: 46  LIQFASSNVSLEAKLTKKITLKSPFISAPMDTVTEENMAIHMALLGGIGIIH-HNCSPDE 104

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
           +   +               ++     + +   + +   F    V D G    KL GI+T
Sbjct: 105 QAEMVRRVKKYENGFISDPVVISPEVSVREVKQMKATMGFTSFPVTDTGKVGGKLVGIVT 164

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             D+     +D   +SV +VM  +     +   L+   QLLR      L +VD     + 
Sbjct: 165 SRDVQF---QDNLDISVSEVMTSDLITGKKGITLSEGNQLLRSSKKGKLPIVDGKGNLVS 221

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 222 MISLTDLQK 230


>gi|157368795|ref|YP_001476784.1| RpiR family transcriptional regulator [Serratia proteamaculans 568]
 gi|157320559|gb|ABV39656.1| transcriptional regulator, RpiR family [Serratia proteamaculans
           568]
          Length = 287

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 65/155 (41%), Gaps = 5/155 (3%)

Query: 50  SFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
                 AVE +   + ++V  G+G  S    +++   L   G P               +
Sbjct: 114 DAALAKAVELLSGAR-QIVAMGMGGGSTLCAAEIQHRLFRLGLPVTAQSDGLLVRMMAAV 172

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           ++R D+++ LS  G + E+      AR++   ++ I +   + +A  AD++L L  +   
Sbjct: 173 VSRQDVVVALSLGGYTQEVVESAAIARQYGAKVVVI-APAGTPLAAQADVLLALVVQEND 231

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
             +   P++S    LA+ D LA AL  +      D
Sbjct: 232 YIYK--PSSSRYAMLAMVDVLATALAMANKRQSRD 264


>gi|322367843|ref|ZP_08042413.1| CBS domain containing protein [Haladaptatus paucihalophilus DX253]
 gi|320552550|gb|EFW94194.1| CBS domain containing protein [Haladaptatus paucihalophilus DX253]
          Length = 395

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/128 (17%), Positives = 52/128 (40%), Gaps = 2/128 (1%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
               +    ++ V      +P V     + +   ++       + V+DE  ++ G++T  
Sbjct: 51  QLASSSNQPSAKVGSRVQHVPTVDRTEDVREVARLMIGSNAKTLPVLDED-RVYGVVTAD 109

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +       L+ ++V+D            T +  A+  LR+  I+ L V+D+ +   GI+
Sbjct: 110 AVLEAVTPFLDAVTVDDAYTTTLISATPTTTMGKALNTLREGRIAHLPVIDNDE-LEGIL 168

Query: 331 HFLDLLRF 338
              D++ F
Sbjct: 169 SLYDVIEF 176



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 26/132 (19%), Positives = 49/132 (37%), Gaps = 29/132 (21%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN------------- 281
               +  A+  L E R   + V+D  + L+GI++  D+     +  N             
Sbjct: 137 PTTTMGKALNTLREGRIAHLPVIDNDE-LEGILSLYDVIEFTTRGGNKSQGGSSDEFSGR 195

Query: 282 --------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKA 326
                          L V ++M      +  DT L V ++ +    IS L+V  ++  + 
Sbjct: 196 GGFGERDGTSDRMLDLPVRNLMSDAAVTVQRDTPLDVVVETMFDQEISSLVVTANETDEP 255

Query: 327 IGIVHFLDLLRF 338
           IGI+   D++  
Sbjct: 256 IGIITKTDVVEA 267


>gi|91200868|emb|CAJ73923.1| similar to inosine-5'-monophosphate dehydrogenase related protein
           II [Candidatus Kuenenia stuttgartiensis]
          Length = 165

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 5/81 (6%)

Query: 265 GIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
           GIITE D+ +     K L  ++ ED+M K P  + EDT +   + ++ +  I  + VV  
Sbjct: 51  GIITEFDLIKAMDQGKSLEQVTAEDIMTKKPICVEEDTTIEKVIHIMAKEAIIRIPVV-K 109

Query: 323 CQKAIGIVHFLDLLR--FGII 341
               +G++   D+LR  +G++
Sbjct: 110 DMVPVGVISRGDVLRCVYGVL 130


>gi|87303510|ref|ZP_01086293.1| CBS protein [Synechococcus sp. WH 5701]
 gi|87281923|gb|EAQ73886.1| CBS protein [Synechococcus sp. WH 5701]
          Length = 144

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/134 (20%), Positives = 52/134 (38%), Gaps = 30/134 (22%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    PL +A+ ++S+     + V+DE   L   ++E D+                    
Sbjct: 8   VTPTTPLQEAVKLMSDHHISGLPVLDEQGALIAELSEQDLMVRESGFDAGPYVMLLDAVI 67

Query: 274 ---------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                    +  H+ L   +V DVM ++P     +  L  A +LL   +   L V  + +
Sbjct: 68  YLRNPLDWDKQVHQVLGN-TVGDVMSRHPHSCSAEVTLAAAAKLLHDRSTQRLFV-REGE 125

Query: 325 KAIGIVHFLDLLRF 338
             +G++   D++R 
Sbjct: 126 TVVGVLTRGDVVRA 139



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 23/48 (47%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M      +   T L  A++L+  H+IS L V+D+    I  +   DL+
Sbjct: 1   MSTPVLSVTPTTPLQEAVKLMSDHHISGLPVLDEQGALIAELSEQDLM 48


>gi|295112714|emb|CBL31351.1| Predicted transcriptional regulator, contains C-terminal CBS
           domains [Enterococcus sp. 7L76]
          Length = 162

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/108 (33%), Positives = 54/108 (50%), Gaps = 9/108 (8%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGII--TE-----GDIFRNFHKDLNTLSVEDVMI 290
           PL  A  +LS+ R+  + V+D+G +  G+I  T+      D+     + LN  +V DVM 
Sbjct: 32  PLNHAALVLSQVRYSKIPVLDKGDRFVGLIGLTDVVDKMFDLTSVDFEKLNEFTVADVME 91

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            N  VI E   L   + LL     S L VVDD Q+  GI+   ++L+ 
Sbjct: 92  VNVPVIGESWDLEEVLHLLVDA--SFLPVVDDNQRFKGIITRKEILKA 137


>gi|116871534|ref|YP_848315.1| inositol-5-monophosphate dehydrogenase [Listeria welshimeri serovar
           6b str. SLCC5334]
 gi|116740412|emb|CAK19532.1| inosine-5-monophosphate dehydrogenase, putative [Listeria
           welshimeri serovar 6b str. SLCC5334]
          Length = 502

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  H ++ L +VD+ +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDHKLNALPLVDENEHLVHMVFRKD 214


>gi|330503354|ref|YP_004380223.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328917640|gb|AEB58471.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 138

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/112 (19%), Positives = 52/112 (46%), Gaps = 3/112 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
              ++  ++    + +A T++++   G + + +EG +L G+IT+ DI  R     L+   
Sbjct: 8   MTRNVRTLEPERSIREAATLMADIDSGALLI-NEGDRLIGMITDRDIAVRAVAAGLDGDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V  VM  N +   +D  +      +    +  L V++  ++ +G+V   ++
Sbjct: 67  PVRQVMSSNVRYCFDDEDVEHVAANMADIQVRRLPVLNREKRLVGVVSLGNI 118



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 8/53 (15%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + +  +M +N + +  +  +  A  L+   +   L++ ++  + IG++   D+
Sbjct: 2   MKISKLMTRNVRTLEPERSIREAATLMADIDSGALLI-NEGDRLIGMITDRDI 53


>gi|304312160|ref|YP_003811758.1| hypothetical protein HDN1F_25320 [gamma proteobacterium HdN1]
 gi|301797893|emb|CBL46115.1| Hypothetical protein HDN1F_25320 [gamma proteobacterium HdN1]
          Length = 137

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 18/123 (14%), Positives = 47/123 (38%), Gaps = 4/123 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-- 276
                  +            + +  +++++     + V+    ++ GI+++ D+      
Sbjct: 5   NVPVEEFTTPDPVTATEAMSVTELKSLMAQHGIRHLPVL-RAGEVVGIVSDRDVRVASGL 63

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             +    +   D+M K P  +  +T L  A  L+ +  +  ++V D+  + +GI    D 
Sbjct: 64  SAEHSLQIQATDIMAKTPLTVSANTPLDKAAFLMSEQKVGSVLVNDERGQFLGIFTVTDA 123

Query: 336 LRF 338
           L  
Sbjct: 124 LNA 126



 Score = 42.2 bits (98), Expect = 0.13,   Method: Composition-based stats.
 Identities = 26/127 (20%), Positives = 39/127 (30%), Gaps = 13/127 (10%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF----------SENDFYVLHP 209
           L +P E  + P    P T+            +A    R+             +D  V   
Sbjct: 4   LNVPVEEFTTPD---PVTATEAMSVTELKSLMAQHGIRHLPVLRAGEVVGIVSDRDVRVA 60

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
            G      +          +   V    PL  A  ++SE++ G V V DE  +  GI T 
Sbjct: 61  SGLSAEHSLQIQATDIMAKTPLTVSANTPLDKAAFLMSEQKVGSVLVNDERGQFLGIFTV 120

Query: 270 GDIFRNF 276
            D     
Sbjct: 121 TDALNAL 127


>gi|218884769|ref|YP_002429151.1| Glutamine-fructose-6-phosphate transaminase [Desulfurococcus
           kamchatkensis 1221n]
 gi|218766385|gb|ACL11784.1| Glutamine-fructose-6-phosphate transaminase [Desulfurococcus
           kamchatkensis 1221n]
          Length = 604

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/153 (21%), Positives = 61/153 (39%), Gaps = 5/153 (3%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFVHAAEASHGDLG 107
            ++      I      V I   G S   G + S   + LA  G     V AAE  +  L 
Sbjct: 278 DKYLRLASMIIHGARDVYIVANGSSLHAGLVASYYFAELA--GISITPVSAAEFPYSILE 335

Query: 108 MITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPE 167
            IT   ++I +S SG + ++   +  A++    +I +T+   S +A  +++ L +   PE
Sbjct: 336 SITTGSVLIAVSQSGETSDVINSVKLAKQRGAVIIGVTNNVGSRLALESNVYLPIGAGPE 395

Query: 168 SCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
                    +S I  L +  +        ++F+
Sbjct: 396 IAVPATKSFSSTIAALLLLASYTGIFNGRQSFN 428


>gi|210615463|ref|ZP_03290590.1| hypothetical protein CLONEX_02806 [Clostridium nexile DSM 1787]
 gi|210150312|gb|EEA81321.1| hypothetical protein CLONEX_02806 [Clostridium nexile DSM 1787]
          Length = 237

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 67/170 (39%), Gaps = 8/170 (4%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHC----AVEKIKAIKGRVVITGIGKSGHIGS 80
           +  L++       L  L        S  F      AV+ I+     + + G+G SG +  
Sbjct: 69  EIVLQNTYPPMEELQELSDFFARANSSAFEKKLLFAVDAIRNADLTIFV-GMGSSGTLAK 127

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
             A   A+ G  +  +              ++ ++I LS SG +D L   ++  ++    
Sbjct: 128 YGARYFANMGHFAVGLEDTLYPITTFQ--WKNTVVIALSESGETDRLIEAIHQFKQKQCT 185

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           +++IT+ + S +A  +D   +     +    G    T+ I  + I +ALA
Sbjct: 186 ILSITNSSASTLAKMSDWNFSYHLSTKRINGGYN-GTTQIPVIFIVEALA 234


>gi|146303315|ref|YP_001190631.1| signal-transduction protein [Metallosphaera sedula DSM 5348]
 gi|145701565|gb|ABP94707.1| putative signal-transduction protein with CBS domains
           [Metallosphaera sedula DSM 5348]
          Length = 375

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 47/128 (36%), Gaps = 3/128 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +       + +++    +  +         I      +   + V D+ + L GIIT   +
Sbjct: 53  IRRRVNLETRIINVSSPVISLSKNDDFNKVIVKFYTTKARAIPVTDDSRNLLGIITREQV 112

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                    L T    + M   P  +  +  +  A  ++ + NIS + +V   +K +GIV
Sbjct: 113 LSYLLNSGQLETGRAREFMSSPPVTLSPEDSVAKARWIMVRDNISRIPIV-QDKKLVGIV 171

Query: 331 HFLDLLRF 338
              D++  
Sbjct: 172 TTRDIVNA 179



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 17/113 (15%), Positives = 37/113 (32%), Gaps = 16/113 (14%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
                  +     +  A  I+       + +V + +KL GI+T  DI             
Sbjct: 131 MSSPPVTLSPEDSVAKARWIMVRDNISRIPIV-QDKKLVGIVTTRDIVNALYTPLSERKR 189

Query: 277 ------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                  + +    ++++M+     +     L    Q L ++ IS   V++  
Sbjct: 190 ASILSEEERVMASPLKEIMVSPVITVSGVDPLKEVAQKLLKNKISGAPVMEGD 242



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           +S  ++M+    V   +  L   +  +++ N  V+ VV + +K +GI+ F +L+R  +
Sbjct: 1   MSASELMVSPSLVANSNDKLRDVLNKMKEANQWVVPVV-NNKKLVGILSFKELIRRRV 57


>gi|52549549|gb|AAU83398.1| conserved hypothetical protein [uncultured archaeon GZfos27G5]
          Length = 293

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 7/106 (6%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-----IFRNFHKDLNTLSVEDVMI 290
              +I     +++   G V +  E  +  GIITE D     + +   +  + +  +++M 
Sbjct: 37  DTGVIKIAKDMADLGVGSVVITSE-GEPAGIITERDIALKVLLKYRGRRGSEVKAKEIMS 95

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                I  +  +  A +L    NI  L VV +    IGI+   ++L
Sbjct: 96  SPLVTIKSEATVEEACELAYTKNIKRLPVV-ESGVLIGIISVRNIL 140


>gi|23100159|ref|NP_693625.1| hypothetical protein OB2704 [Oceanobacillus iheyensis HTE831]
 gi|22778391|dbj|BAC14660.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
          Length = 185

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/172 (20%), Positives = 66/172 (38%), Gaps = 18/172 (10%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           + +I  E + +      L      +     E I+    RV I G G+SG +G      L 
Sbjct: 5   VNTIAKEIQEV------LGQVNEAELIELAEGIQQAS-RVFIAGTGRSGLVGKMFGMRLM 57

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
            +G   + V            +  +DL+I++S SG +  L      A+     +  +T+ 
Sbjct: 58  HSGYQIYIVGETNTP-----SLESNDLLILISGSGGTSSLLNYAKKAKEIDAKVALVTTN 112

Query: 148 NKSVVACHADIVLTLPKEPESC----PHGLAPTTSAIMQLA--IGDALAIAL 193
            +S +   +  ++ +P   +      P  + P  S   Q A  + DA+ + L
Sbjct: 113 KESAIGSQSTYIVRVPAATKKRLPQEPETIQPLGSQFDQSAHLLLDAIVVYL 164


>gi|15643094|ref|NP_228137.1| RpiR family transcriptional regulator [Thermotoga maritima MSB8]
 gi|7388396|sp|Q9WYG1|Y326_THEMA RecName: Full=Uncharacterized HTH-type transcriptional regulator
           TM_0326
 gi|4980827|gb|AAD35413.1|AE001714_4 transcriptional regulator, RpiR family [Thermotoga maritima MSB8]
          Length = 280

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/162 (19%), Positives = 60/162 (37%), Gaps = 3/162 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           K  + ++  +L           V+  K  + R++  G   S  +           G    
Sbjct: 102 KATVRAILDTLNWLDIDSIERTVDLFKNAQ-RIIFIGFAASAAVAFDAFHKFTRIGKNCL 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           F +        L   +  DL++ +S +G +  +      A+   +P++ IT   KS +A 
Sbjct: 161 FSNDEHIIAAILATASPSDLLVAISHTGETISVVNFAKKAKEMKMPVVTITGNRKSTLAK 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++D+VL      +         TS I+QL I D +   L   
Sbjct: 221 YSDVVLAT--NTKETKIRTDAMTSRIVQLVILDTIYTLLAAR 260


>gi|322695916|gb|EFY87716.1| inosine-5'-monophosphate dehydrogenase IMD2 [Metarhizium acridum
           CQMa 102]
          Length = 539

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 58/172 (33%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M       +AI +            V+H              V         
Sbjct: 77  KTPFVSSPMDTVTEHEMAIHMALQGGLG-----VIHHNCSPDAQADMVRKVKRYENGFIL 131

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
              ++     + +A  +     FG   V ++G+   KL GI+T  D+     +D N  +V
Sbjct: 132 DPVVIDRNTTVGEAKALKERWGFGGFPVTEDGKLGSKLLGIVTNRDLQF---EDENDATV 188

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VM+ +         L  A ++L +     L +VD     + ++   DL +
Sbjct: 189 ASVMVTDLVTAPHGVTLVEANKILAKSKKGKLPIVDKDFNLVSMISRSDLTK 240


>gi|256752385|ref|ZP_05493245.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter ethanolicus CCSD1]
 gi|256748720|gb|EEU61764.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter ethanolicus CCSD1]
          Length = 435

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   + +E +     VVD    L G++T  D+      D     +  +M  NP 
Sbjct: 202 PQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVATASDDD----KIGSIMTPNPV 257

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + T L+ A  L+   N+ +L V    ++ IG++   D+++ 
Sbjct: 258 FVTDTTTLSYAAHLMIWWNVEILPVT-RGRELIGLISREDVIKA 300



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V DVM  NP  +     +    +L  +   +   VVD     +G+V   D
Sbjct: 189 VSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRD 238


>gi|326531054|dbj|BAK04878.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 547

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/186 (17%), Positives = 66/186 (35%), Gaps = 12/186 (6%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD-ALAIALLESRNFSENDFYVLHPGGKLG 214
           +++ L      +         +S +  +     A+AIAL        ++         + 
Sbjct: 57  SEVSLQTKVTKK-ITLNSPFLSSPMDTVTETQMAIAIALHGGLGIIHHNCSAQEQAAMVR 115

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGD 271
            +    +  +     +     G  + DA+ I  +  FG + + + G    KL GI+T  D
Sbjct: 116 KVKKYENGFITDPICL---GAGDLVEDALEIKEKLGFGGIPITETGKVGGKLLGIVTGRD 172

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           +         +  + DVM  +         L  A Q++R      L +VD     + ++ 
Sbjct: 173 V----QFRDASAPLADVMTTDLVTGNSGISLQEANQIIRDSKKGKLPIVDAEGNLVSLLA 228

Query: 332 FLDLLR 337
             DLL+
Sbjct: 229 RSDLLK 234


>gi|313224444|emb|CBY20234.1| unnamed protein product [Oikopleura dioica]
          Length = 651

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 3/139 (2%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           R+VI G G S H        +         V  A       G I RDD++I +S SG + 
Sbjct: 332 RIVILGCGTSYHAAIAARQLIEEMSDLPVTVDVASDFVDRSGAIYRDDVVIFVSQSGETA 391

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           +  + L YA++    L+ IT+   S ++   D  +      E    G+A T +   Q  +
Sbjct: 392 DTLSALNYAKKRGCLLVGITNTVGSTISRETDCGIHCNAGQE---IGVASTKTFSAQFTV 448

Query: 186 GDALAIALLESRNFSENDF 204
               A+ L E R      +
Sbjct: 449 LVLFALLLSEGRFSKRKRY 467


>gi|148239502|ref|YP_001224889.1| CBS domain-containing protein [Synechococcus sp. WH 7803]
 gi|147848041|emb|CAK23592.1| CBS domain containing protein [Synechococcus sp. WH 7803]
          Length = 156

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 27/133 (20%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------- 273
           V    PL DA+T+LS+     V VV +   L G +TE ++                    
Sbjct: 18  VTPETPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLMVRESGVDAGPYVMLLDSVI 77

Query: 274 -----RNFHKDLNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
                 N+ K ++ +   +V D+M ++         L  A  +L +     L+V+DD ++
Sbjct: 78  YLRNPLNWDKQVHQVLGNTVADLMSRDSHSCAHSLPLPKAASMLHEKGTQRLIVIDDERR 137

Query: 326 AIGIVHFLDLLRF 338
            +G++   D++R 
Sbjct: 138 PVGMLTRGDVVRA 150



 Score = 53.0 bits (126), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +V +VM      +  +T L  A+ LL  H+IS + VV D    +G +   +L+
Sbjct: 2   VLQQTVGEVMSAPVLTVTPETPLKDAVTLLSDHHISGVPVVGDDGTLVGELTEQNLM 58


>gi|116255703|ref|YP_771536.1| putative HTH-type transcriptional regulator [Rhizobium
           leguminosarum bv. viciae 3841]
 gi|115260351|emb|CAK03455.1| putative HTH-type transcriptional regulator [Rhizobium
           leguminosarum bv. viciae 3841]
          Length = 287

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
                  A   I   +  L  L  SL          AV  I            G S  I 
Sbjct: 87  STDPADVAQDIITKAQNALFLLHRSLD---LAAIEAAVSHIAKADMIYAFGSGGNSSMIA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            +L + L   G                      D++I  S+SG + EL      AR+  +
Sbjct: 144 DELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFSGRNMELVRAFELARQTKV 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             IA+T +  S VA  A+IV  +P +     +   PT++ I  +A  D L+  +  +
Sbjct: 204 KTIALT-QTDSPVAKAAEIV--VPIDLPEGHNIYRPTSTRIAYIATIDILSSLVAYA 257


>gi|167039836|ref|YP_001662821.1| DRTGG domain-containing protein [Thermoanaerobacter sp. X514]
 gi|300915333|ref|ZP_07132647.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter sp. X561]
 gi|307724840|ref|YP_003904591.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter sp. X513]
 gi|166854076|gb|ABY92485.1| DRTGG domain protein [Thermoanaerobacter sp. X514]
 gi|300888609|gb|EFK83757.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter sp. X561]
 gi|307581901|gb|ADN55300.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter sp. X513]
          Length = 435

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   + +E +     VVD    L G++T  D+      D     +  +M  NP 
Sbjct: 202 PQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVATASDDD----KIGSIMTPNPV 257

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + T L+ A  L+   N+ +L V    ++ IG++   D+++ 
Sbjct: 258 FVTDTTTLSYAAHLMIWWNVEILPVT-RGRELIGLISREDVIKA 300



 Score = 41.4 bits (96), Expect = 0.18,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V DVM  NP  +     +    +L  +   +   VVD     +G+V   D
Sbjct: 189 VSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRD 238


>gi|330961414|gb|EGH61674.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           maculicola str. ES4326]
          Length = 288

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L    S     AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLD---SHALQLAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKSTDVAVCISQSGRSKDLLITANLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|300937950|ref|ZP_07152735.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 21-1]
 gi|300457047|gb|EFK20540.1| putative 6-phospho 3-hexuloisomerase [Escherichia coli MS 21-1]
          Length = 185

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 12/182 (6%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
            +++ L+ L ++L    + +    +E ++A +  V   G+G+       +A  LA  G  
Sbjct: 6   NQEKVLAELRATLGNISADEVERLIEMVEAAEN-VFFVGVGRVLLSLQAMAKRLAHMGIK 64

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           ++ V            IT  DL+IV S SG S     I   A+ F   ++ I +  +S +
Sbjct: 65  TYVVGQITEP-----AITERDLLIVGSGSGESMFPLGIARKAKSFHASVVHIGANPESSM 119

Query: 153 ACHADIVLTLPKEPE----SCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYV 206
             ++D+ + +  + +    S    + P TS   Q    +GD +A+ L+  R  + ++ + 
Sbjct: 120 KAYSDLFVRIGVKTKLNLPSEIPSIQPMTSLFEQSLLLLGDIVALELIGKRKINMHELWQ 179

Query: 207 LH 208
            H
Sbjct: 180 FH 181


>gi|221636119|ref|YP_002523995.1| N-acetylmuramic acid 6-phosphate etherase [Thermomicrobium roseum
           DSM 5159]
 gi|221158101|gb|ACM07219.1| N-acetylmuramic acid 6-phosphate etherase [Thermomicrobium roseum
           DSM 5159]
          Length = 305

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/191 (20%), Positives = 73/191 (38%), Gaps = 37/191 (19%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST- 89
           ++AE+  +++L   +           VE+++   GR+V  G G SG +G   A     T 
Sbjct: 45  VLAERTAIAALADVV-----------VERMRR-GGRLVYVGAGTSGRLGMLDAIECIPTY 92

Query: 90  ------------GTPSFFVHAAEASHGD----------LGMITRDDLIIVLSWSGSSDEL 127
                       G P+      EA+  D          LG I  DD+++ +S SG +  +
Sbjct: 93  GLEPGRIVALVAGGPAALTGPVEAAEDDEEAGARELTALG-IGPDDVVLGISASGRTPYV 151

Query: 128 KAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGD 187
           +  L  AR+    +  +     + +A  AD+V+  P        G     +   Q  +  
Sbjct: 152 RGALREARQRGAYVAVLVCNRPAPLADLADLVI-APVVGPEVIAGSTRMKAGTAQKLVLT 210

Query: 188 ALAIALLESRN 198
           AL+  ++    
Sbjct: 211 ALSTTVMVRLG 221


>gi|186473303|ref|YP_001860645.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184195635|gb|ACC73599.1| CBS domain containing membrane protein [Burkholderia phymatum
           STM815]
          Length = 373

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 44/121 (36%), Gaps = 17/121 (14%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI----------------FRNF 276
           V     L  A  +L       + VVD  Q + GI+T  D+                 R F
Sbjct: 233 VAPNTTLRAAADLLQRHSIKALPVVDNRQHVVGILTRADLTNKPKSADLRLMEALSARLF 292

Query: 277 HKDLNTLS-VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +D N    V  VM  + + +  DT +   +          + V+D   + +GI+   DL
Sbjct: 293 KRDENRGRLVSSVMTTHVRTVATDTPIVELVPFFADDGHHHIPVIDTHDRLVGIITQSDL 352

Query: 336 L 336
           +
Sbjct: 353 I 353



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 20/64 (31%), Positives = 31/64 (48%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              + +    L+  DVM      +  +T L  A  LL++H+I  L VVD+ Q  +GI+  
Sbjct: 210 MHAYARTFGELACRDVMSAPVVSVAPNTTLRAAADLLQRHSIKALPVVDNRQHVVGILTR 269

Query: 333 LDLL 336
            DL 
Sbjct: 270 ADLT 273



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
               +  V    P+++ +   ++     + V+D   +L GIIT+ D+    ++
Sbjct: 306 MTTHVRTVATDTPIVELVPFFADDGHHHIPVIDTHDRLVGIITQSDLIEGLYR 358


>gi|170726886|ref|YP_001760912.1| DNA-binding transcriptional regulator HexR [Shewanella woodyi ATCC
           51908]
 gi|169812233|gb|ACA86817.1| transcriptional regulator, RpiR family [Shewanella woodyi ATCC
           51908]
          Length = 284

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSIDTAAINKAVDILTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+I+++S +G +  +  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSGEGDVIVLISHTGRTKSMIDIARIARENGAAVIGITAR-YSPLSTEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL + D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVVVDVLATGFTLRRG 259


>gi|16767663|ref|NP_463278.1| transcriptional regulator [Salmonella enterica subsp. enterica
           serovar Typhimurium str. LT2]
 gi|161617698|ref|YP_001591663.1| hypothetical protein SPAB_05561 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|167991196|ref|ZP_02572295.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|168262550|ref|ZP_02684523.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|168821166|ref|ZP_02833166.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|197250079|ref|YP_002149333.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197265464|ref|ZP_03165538.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|200386667|ref|ZP_03213279.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|238910575|ref|ZP_04654412.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Tennessee str. CDC07-0191]
 gi|16422980|gb|AAL23237.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. LT2]
 gi|161367062|gb|ABX70830.1| hypothetical protein SPAB_05561 [Salmonella enterica subsp.
           enterica serovar Paratyphi B str. SPB7]
 gi|197213782|gb|ACH51179.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Agona str. SL483]
 gi|197243719|gb|EDY26339.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA23]
 gi|199603765|gb|EDZ02310.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Virchow str. SL491]
 gi|205330289|gb|EDZ17053.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar 4,[5],12:i:- str. CVM23701]
 gi|205342270|gb|EDZ29034.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Weltevreden str. HI_N05-537]
 gi|205348756|gb|EDZ35387.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Hadar str. RI_05P066]
 gi|261249507|emb|CBG27372.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. D23580]
 gi|267996757|gb|ACY91642.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 14028S]
 gi|301160904|emb|CBW20436.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. SL1344]
 gi|312915515|dbj|BAJ39489.1| RpiR-family transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. T000240]
 gi|320088845|emb|CBY98603.1| Bifunctional protein glk Includes: Glucokinase; Glucose kinase;
           Includes: RecName: Full=putative HTH-type
           transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Weltevreden str. 2007-60-3289-1]
 gi|321222616|gb|EFX47688.1| putative transcriptional regulator of the myo-inositol catabolic
           operon [Salmonella enterica subsp. enterica serovar
           Typhimurium str. TN061786]
 gi|322615580|gb|EFY12500.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315996572]
 gi|322618640|gb|EFY15529.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-1]
 gi|322621947|gb|EFY18797.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-3]
 gi|322627671|gb|EFY24462.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 495297-4]
 gi|322630978|gb|EFY27742.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-1]
 gi|322637803|gb|EFY34504.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 515920-2]
 gi|322643964|gb|EFY40512.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           NC_MB110209-0054]
 gi|322650961|gb|EFY47346.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. OH_2009072675]
 gi|322656787|gb|EFY53075.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str.
           CASC_09SCPH15965]
 gi|322659789|gb|EFY56032.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 19N]
 gi|322662000|gb|EFY58216.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 81038-01]
 gi|322666251|gb|EFY62429.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MD_MDA09249507]
 gi|322672671|gb|EFY68782.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 414877]
 gi|322676101|gb|EFY72172.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 366867]
 gi|322680585|gb|EFY76623.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 413180]
 gi|322684521|gb|EFY80525.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 446600]
 gi|323132754|gb|ADX20184.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. 4/74]
 gi|323192836|gb|EFZ78062.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609458-1]
 gi|323197288|gb|EFZ82428.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556150-1]
 gi|323201595|gb|EFZ86659.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 609460]
 gi|323206109|gb|EFZ91071.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 507440-20]
 gi|323213117|gb|EFZ97919.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 556152]
 gi|323215491|gb|EGA00235.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB101509-0077]
 gi|323219476|gb|EGA03961.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB102109-0047]
 gi|323227779|gb|EGA11933.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB110209-0055]
 gi|323228949|gb|EGA13078.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. MB111609-0052]
 gi|323236439|gb|EGA20515.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009083312]
 gi|323240059|gb|EGA24106.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 2009085258]
 gi|323241893|gb|EGA25922.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. 315731156]
 gi|323247958|gb|EGA31895.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2009159199]
 gi|323251404|gb|EGA35275.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008282]
 gi|323258230|gb|EGA41907.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008283]
 gi|323263624|gb|EGA47145.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008284]
 gi|323265780|gb|EGA49276.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008285]
 gi|323270224|gb|EGA53672.1| transcriptional regulator, RpiR family protein [Salmonella enterica
           subsp. enterica serovar Montevideo str. IA_2010008287]
 gi|332991229|gb|AEF10212.1| putative transcriptional regulator [Salmonella enterica subsp.
           enterica serovar Typhimurium str. UK-1]
          Length = 277

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 5/157 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   ++ E   Q   AV  +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQVLQQLPVQIKNE---QLDAAVNLLAKADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M++ DD++I +S+S  + E+  ++    +     IAIT    S +A
Sbjct: 179 LIDGIGGMFSEQLSMVSPDDVVIAISYSPYAQEVVELVELGAKRGAHHIAITDSQVSPLA 238

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
             +++   + +           +      LA+  ALA
Sbjct: 239 AFSEVCFVVREAQVDGFRSQVASMCLAQTLAVSLALA 275


>gi|54296767|ref|YP_123136.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
 gi|53750552|emb|CAH11954.1| hypothetical protein lpp0806 [Legionella pneumophila str. Paris]
          Length = 144

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLN--T 282
               I  +     + + I  + EK  G + V D    L GI++E DI R  FHK L+  T
Sbjct: 12  PPRKIAYIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILRCYFHKSLSLET 71

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             V DV+  N  ++     +  AMQ++ +     +++  +  + + I+   DLL
Sbjct: 72  AKVSDVVYTNVTILSPHDSVEKAMQVITETKRRHVLI-QEEGELLAILSIGDLL 124



 Score = 46.4 bits (109), Expect = 0.005,   Method: Composition-based stats.
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            I  D  +   ++ + + +I  L+V D+    IGIV   D+LR
Sbjct: 18  YIHPDDSVKECIKQMVEKDIGALVVFDNDAHLIGIVSERDILR 60


>gi|33862186|ref|NP_893747.1| Mg2+ transporter [Prochlorococcus marinus subsp. pastoris str.
           CCMP1986]
 gi|33634404|emb|CAE20089.1| MgtE family, putative magnesium transport protein [Prochlorococcus
           marinus subsp. pastoris str. CCMP1986]
          Length = 469

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/127 (21%), Positives = 57/127 (44%), Gaps = 12/127 (9%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
           G  + T F+   ++  + +++ +V+      + I  L         V D+ + L GI++ 
Sbjct: 150 GRLMTTEFIDLKEMQTAEEALSIVRKRAAFTETIYSLY--------VTDKERHLTGILSL 201

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            D+         T  + +VM K+   I  +T      + +++++   L VVD  ++ +GI
Sbjct: 202 RDLVTA----DPTRPIGEVMTKDVVNISTNTNQEDVARAIQRYDFLALPVVDKEKRLVGI 257

Query: 330 VHFLDLL 336
           V   DL+
Sbjct: 258 VTVDDLI 264



 Score = 40.3 bits (93), Expect = 0.41,   Method: Composition-based stats.
 Identities = 12/60 (20%), Positives = 22/60 (36%), Gaps = 5/60 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      + E      A+ ++R+       I  L V D  +   GI+   DL+  
Sbjct: 148 TAGRLMTTEFIDLKEMQTAEEALSIVRKRAAFTETIYSLYVTDKERHLTGILSLRDLVTA 207


>gi|241666541|ref|YP_002984625.1| transcriptional regulator, RpiR family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gi|240861998|gb|ACS59663.1| transcriptional regulator, RpiR family [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 287

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
                  A   I   +  L  L  SL          AV  I            G S  I 
Sbjct: 87  STDPADVAQDIITKAQNALFLLHRSLD---LAAIEAAVSHIAKADMIYAFGSGGNSSMIA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            +L + L   G                      D++I  S+SG + EL      AR+  +
Sbjct: 144 DELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFSGRNMELVRAFELARQTKV 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             IA+T +  S VA  A+IV  +P +     +   PT++ I  +A  D L+  +  +
Sbjct: 204 KTIALT-QTDSPVAKAAEIV--VPIDLPEGHNIYRPTSTRIAYIATIDILSSLVAYA 257


>gi|149175500|ref|ZP_01854121.1| phosphoheptose isomerase [Planctomyces maris DSM 8797]
 gi|148845768|gb|EDL60110.1| phosphoheptose isomerase [Planctomyces maris DSM 8797]
          Length = 214

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 35/159 (22%), Positives = 58/159 (36%), Gaps = 30/159 (18%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLAST 85
           RSI A+K+ L ++E      +  +F  AV+ I       GR+ + G G S      LA+ 
Sbjct: 14  RSIAAKKQLLENVE------IQQEFSKAVDLILQSYQQGGRLYLAGNGGSAADAQHLAAE 67

Query: 86  LASTGTPSFFVHAAEASHGDL---------------------GMITRDDLIIVLSWSGSS 124
                        AEA   D                      G +T +D+ + ++ SG+S
Sbjct: 68  FVCRLGKDRASLPAEALTTDSSIITAIGNDYGYDVVFSRQLEGKLTANDVFLGITTSGNS 127

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
             +   +   R  ++P I  T      V    D+ +  P
Sbjct: 128 PNIVKAVEACREKNVPSIIFTGNEGGTVRRLCDVCVIAP 166


>gi|296158140|ref|ZP_06840972.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
 gi|295891476|gb|EFG71262.1| transcriptional regulator, RpiR family [Burkholderia sp. Ch1-1]
          Length = 293

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 117 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 173 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 227 KTLVITDSQLSPLARYATTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|270261946|ref|ZP_06190218.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
 gi|270043822|gb|EFA16914.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
          Length = 244

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 3/122 (2%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
             E + Q   AV+ I A + R++  G+  SG +G   A   ++ G  S  +         
Sbjct: 94  NDEFNQQIDQAVQHIAAAE-RIIFVGVSTSGALGRYGARFFSNVGKFSTHIDDPYYPINS 152

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
              + +  + I+LS SG ++E+  +          +++IT+   S +A  AD  L+    
Sbjct: 153 --DMYKSAVAIMLSVSGETEEILRLASQFSLHHCKIVSITNNETSSLAKIADFNLSYHVP 210

Query: 166 PE 167
            +
Sbjct: 211 QQ 212


>gi|332796019|ref|YP_004457519.1| glutamine amidotransferase class-II [Acidianus hospitalis W1]
 gi|332693754|gb|AEE93221.1| glutamine amidotransferase class-II [Acidianus hospitalis W1]
          Length = 585

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/133 (23%), Positives = 55/133 (41%), Gaps = 3/133 (2%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
            I      V + G G S H G   +   A  G     V AAE  +  L  I    +II +
Sbjct: 274 MIVYGAKNVYVIGNGTSLHAGLISSYYFAEVGINVNVVSAAEFPYYALENIGTGSVIIAI 333

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG + ++   +  A++    ++ IT+   S +A  +++ L +   PE     +  T +
Sbjct: 334 SQSGETADVIRSVKMAKQRGAVIVGITNSVGSRLALESNVYLPITAGPE---LAVPATKT 390

Query: 179 AIMQLAIGDALAI 191
               L +   L++
Sbjct: 391 FTSTLVVLRTLSL 403


>gi|311069469|ref|YP_003974392.1| acetoin degradation regulation pathway protein [Bacillus atrophaeus
           1942]
 gi|310869986|gb|ADP33461.1| acetoin degradation regulation pathway protein [Bacillus atrophaeus
           1942]
          Length = 214

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 25/110 (22%), Positives = 47/110 (42%), Gaps = 9/110 (8%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN----FHKDLN----TLSVED 287
              +  AI  L + R   + V+++ + + G+IT+ DI +     F +         S+E 
Sbjct: 17  TDTIETAIHKLKQHRIRHIPVINDDRHVIGLITDRDIKQASPSIFEEGERSRYLKKSLES 76

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M ++         +     +  +  I  L +V   QK +GI+   DLLR
Sbjct: 77  LMKRDVVCAHPLDFVEEISAVFYERGIGCLPIV-LNQKLVGILTKTDLLR 125



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 27/54 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            E +M +    + +   +  A+  L+QH I  + V++D +  IG++   D+ + 
Sbjct: 3   AEQIMKREVITMTKTDTIETAIHKLKQHRIRHIPVINDDRHVIGLITDRDIKQA 56


>gi|308234215|ref|ZP_07664952.1| RpiR family transcriptional regulator [Atopobium vaginae DSM 15829]
 gi|328943495|ref|ZP_08240960.1| RpiR family gluconate operon transcriptional regulator [Atopobium
           vaginae DSM 15829]
 gi|327491464|gb|EGF23238.1| RpiR family gluconate operon transcriptional regulator [Atopobium
           vaginae DSM 15829]
          Length = 285

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 57/167 (34%), Gaps = 7/167 (4%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL ++L          A+  I      +   G G S  + +        +       
Sbjct: 105 SVTSLHNTLALLNEDNLKRALSLINNAHT-LTFFGCGGSNIVAADAYHKFLRSPLHCQNA 163

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                      ++   D+ I++S SG S     I    R   +P+I ITS   + +   A
Sbjct: 164 IDEHIQIMQASLLGAQDVAIIISHSGLSRTTLQIAEILRENRVPIIFITSYLNTPITRFA 223

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           D+V     E            S + QL I D L  A++    F  +D
Sbjct: 224 DVVFISASEETGYRSESL--ASRVAQLVILDTLFCAVM----FKSDD 264


>gi|167037101|ref|YP_001664679.1| signal-transduction protein [Thermoanaerobacter pseudethanolicus
           ATCC 33223]
 gi|307265891|ref|ZP_07547440.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|320115516|ref|YP_004185675.1| DRTGG domain-containing protein [Thermoanaerobacter brockii subsp.
           finnii Ako-1]
 gi|326390937|ref|ZP_08212487.1| putative signal transduction protein [Thermoanaerobacter
           ethanolicus JW 200]
 gi|166855935|gb|ABY94343.1| putative signal-transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter pseudethanolicus ATCC 33223]
 gi|306919060|gb|EFN49285.1| putative signal transduction protein with CBS and DRTGG domains
           [Thermoanaerobacter wiegelii Rt8.B1]
 gi|319928607|gb|ADV79292.1| DRTGG domain protein [Thermoanaerobacter brockii subsp. finnii
           Ako-1]
 gi|325992979|gb|EGD51421.1| putative signal transduction protein [Thermoanaerobacter
           ethanolicus JW 200]
          Length = 435

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
               + D   + +E +     VVD    L G++T  D+      D     +  +M  NP 
Sbjct: 202 PQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRDVATASDDD----KIGSIMTPNPV 257

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + T L+ A  L+   N+ +L V    ++ IG++   D+++ 
Sbjct: 258 FVTDTTTLSYAAHLMIWWNVEILPVT-RGRELIGLISREDVIKA 300



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 20/50 (40%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           V DVM  NP  +     +    +L  +   +   VVD     +G+V   D
Sbjct: 189 VSDVMTYNPIYMTPQQTVKDWKKLYTETKHTRYPVVDSKGMLVGMVTSRD 238


>gi|134094437|ref|YP_001099512.1| CBS domain-containing protein [Herminiimonas arsenicoxydans]
 gi|133738340|emb|CAL61385.1| conserved hypothetical protein; putative CBS domain [Herminiimonas
           arsenicoxydans]
          Length = 151

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 52/109 (47%), Gaps = 5/109 (4%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNTLSVEDVM 289
           V    P++DA+ +++EK  G + VV E   L G+++  ++          +   SV   M
Sbjct: 17  VTPDSPMLDAVNVMAEKDIGSL-VVMEKGNLIGMLSFREVMATIHAHGGAIGGGSVRQHM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P  I  DT +    +++ + +   + V+D  +  +G++ F D+ + 
Sbjct: 76  DSSPITISCDTEINEVRRMMLEKHARYVPVMD-GKILVGVISFYDVAKA 123



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 8/42 (19%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+ +  A+ ++ + +I  L+V++     IG++ F +++
Sbjct: 16  TVTPDSPMLDAVNVMAEKDIGSLVVMEKGN-LIGMLSFREVM 56


>gi|322368694|ref|ZP_08043261.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
 gi|320551425|gb|EFW93072.1| putative signal transduction protein with CBS domains [Haladaptatus
           paucihalophilus DX253]
          Length = 192

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 50/108 (46%), Gaps = 3/108 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           V     ++ A+ ++S++  G V VV  G++  GI+TE D+       ++    +V + M 
Sbjct: 18  VSESDTVLGAVRLMSDEGVGSV-VVLRGREPVGIMTEADVLSLVADEEEPKETTVSEAMS 76

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    +  D  L  A  ++ Q  I  +++     + +G++   D++  
Sbjct: 77  KPVISMRPDRSLADAAGMMAQQGIRRIIITGADDELLGVLTERDVISA 124


>gi|284988893|ref|YP_003407447.1| IMP dehydrogenase family protein [Geodermatophilus obscurus DSM
           43160]
 gi|284062138|gb|ADB73076.1| IMP dehydrogenase family protein [Geodermatophilus obscurus DSM
           43160]
          Length = 477

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 36/191 (18%), Positives = 66/191 (34%), Gaps = 16/191 (8%)

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYV 206
            S V    ++ LT P           P   A M    G  +A  +      +    D   
Sbjct: 24  HSTVGSRLEVDLTTP----DRVGTTIPLVVANMTAISGRRMAETVARRGGLAVLPQDI-- 77

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             P   +  +           D+   +     + DA+++L+++  G V VV E     G+
Sbjct: 78  --PVDVVAEVVAWTKARHPVYDTAITLSPTSTVADALSLLTKRAHGIVVVV-EDGFPLGV 134

Query: 267 ITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
           +T+G              +  VM ++P  +   T L     +L    +S   VV +  + 
Sbjct: 135 VTDGQC----QGVDRFTQLSQVMTEDPLTVPAGTDLPKIFDVLSGERVSAAPVV-EGDRL 189

Query: 327 IGIVHFLDLLR 337
           +G++     LR
Sbjct: 190 VGVITRKGALR 200


>gi|70606054|ref|YP_254924.1| CBS domain-containing protein [Sulfolobus acidocaldarius DSM 639]
 gi|68566702|gb|AAY79631.1| CBS domain protein [Sulfolobus acidocaldarius DSM 639]
          Length = 377

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 50/126 (39%), Gaps = 3/126 (2%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           L       S V++       V +   +   I      R   + V+DE ++  GI+T   +
Sbjct: 54  LKKRISPESKVVNLMSPPISVNLNDDIGRVIAKFYTTRSRAIPVIDEKKRFTGIVTRERV 113

Query: 273 FRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
              F   ++     V +VM      I  +  +  A  L+  +NI+ L V+   ++  GI+
Sbjct: 114 LLQFLNEEEFKKAKVREVMNSPAITIDAEDSVARARWLMSNNNITKLPVI-QGKEVAGII 172

Query: 331 HFLDLL 336
              D+L
Sbjct: 173 SARDIL 178



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 22/139 (15%), Positives = 48/139 (34%), Gaps = 16/139 (11%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
               F  A            +     +  A  ++S      + V+ +G+++ GII+  DI
Sbjct: 119 NEEEFKKAKVREVMNSPAITIDAEDSVARARWLMSNNNITKLPVI-QGKEVAGIISARDI 177

Query: 273 FRNF--------------HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                              + L  + ++++M      +     L  A+  L    IS + 
Sbjct: 178 LNRLYSISGKKKSSILTEEERLMAMPIKEIMNYPVITVNGAENLHSAVNTLLTRKISGMP 237

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+ +    +G+   +D L+
Sbjct: 238 VL-EGNMIVGMFSGIDALK 255



 Score = 39.5 bits (91), Expect = 0.68,   Method: Composition-based stats.
 Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 4/105 (3%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVE 286
            +   +   G  + + I+ + E+    V V+ + + L GII+  D+ +   +      V 
Sbjct: 9   EEPKVIATYGDRIREVISKMREQNQWVVPVL-KEKLLVGIISYNDLLK--KRISPESKVV 65

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           ++M   P  +  +  +   +          + V+D+ ++  GIV 
Sbjct: 66  NLMSP-PISVNLNDDIGRVIAKFYTTRSRAIPVIDEKKRFTGIVT 109


>gi|119774948|ref|YP_927688.1| DNA-binding transcriptional regulator HexR [Shewanella amazonensis
           SB2B]
 gi|119767448|gb|ABM00019.1| transcriptional regulator, RpiR family [Shewanella amazonensis
           SB2B]
          Length = 284

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDMQAINKAVDILTQAKT-ISFFGLGASAAVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIDIARLARENGAAVIGITAR-NSPLSVEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL + D LA      R     D
Sbjct: 220 TLSVTMEVPEDTDMY--LPMASRLAQLVVIDVLATGFTLRRGPRFRD 264


>gi|328958066|ref|YP_004375452.1| putative transcriptional regulator with a sugarisomerase domain,
           RpiR family [Carnobacterium sp. 17-4]
 gi|328674390|gb|AEB30436.1| putative transcriptional regulator with a sugarisomerase domain,
           RpiR family [Carnobacterium sp. 17-4]
          Length = 268

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/168 (20%), Positives = 65/168 (38%), Gaps = 6/168 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + ++S    ++ +    F  A+        +++I G+G SG    +L   L   G    
Sbjct: 96  TQLINSASQLIETQQITDFVEAIHL----SNKILICGVGNSGLSAMELKYRLVRMGLIVD 151

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            V        D  ++ + DL+I +S  G +  +      A++    +  IT++N + +  
Sbjct: 152 VVTDPHMMLMDAVLLKKYDLMIAISNYGQTQAVIDACTIAKKEHATVFVITNQNHTPLTN 211

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            AD VL                 S +    I D L   LLE++++  N
Sbjct: 212 IADQVLFASGRTSIPDD--QFINSQLPIHFILDVLCYVLLENKSYKNN 257


>gi|325526622|gb|EGD04165.1| signal-transduction protein [Burkholderia sp. TJI49]
          Length = 149

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 44/111 (39%), Gaps = 6/111 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFHK---DLNTLSVE 286
               C   +   I+     G V V+   + G    G++T+ D+         D   +   
Sbjct: 14  CTAECSAFELAGIMRHTHVGDVVVIEYRNGGAIPIGLVTDRDLVIEVMARGDDPANVKAG 73

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +M +   V+ +   + VA+  + +  +  L VVD+     GIV   D++R
Sbjct: 74  QIMSRGLVVVSDADEIGVALDEMHRSGVRRLPVVDNGGSLAGIVTLDDIVR 124



 Score = 40.7 bits (94), Expect = 0.34,   Method: Composition-based stats.
 Identities = 20/96 (20%), Positives = 33/96 (34%), Gaps = 7/96 (7%)

Query: 186 GDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
           G A+ I L+  R+               G               + +V     +  A+  
Sbjct: 43  GGAIPIGLVTDRDLVIEVMAR-------GDDPANVKAGQIMSRGLVVVSDADEIGVALDE 95

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
           +       + VVD G  L GI+T  DI R+  + L+
Sbjct: 96  MHRSGVRRLPVVDNGGSLAGIVTLDDIVRHLAELLD 131


>gi|299536082|ref|ZP_07049399.1| putative HTH-type transcriptional regulator [Lysinibacillus
           fusiformis ZC1]
 gi|298728506|gb|EFI69064.1| putative HTH-type transcriptional regulator [Lysinibacillus
           fusiformis ZC1]
          Length = 306

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 30/185 (16%), Positives = 64/185 (34%), Gaps = 4/185 (2%)

Query: 7   HFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGR 66
             +    +   +  N  +   +  +  +   +  L  +       +   A+  +     +
Sbjct: 90  DLQHAKTEDRDIEANEALPSIVEKVTMQSSEI--LTQTANLIDIAELERAITALSQAD-K 146

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           ++  G+G SG                S            +    + D+++ +S+SG + E
Sbjct: 147 IIFFGVGASGIAAMDADQKFLRINKNSRAFVDLHLGATAVVNTQKGDVVVGISFSGETHE 206

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
           +  IL  A +     I++T    S V+  ADI L +             T+S + QL + 
Sbjct: 207 VAKILEIASQTPATTISLTRYGSSPVSSLADICLYVS-PNVEATFRSGATSSRLAQLLVI 265

Query: 187 DALAI 191
           D L +
Sbjct: 266 DILFM 270


>gi|56122518|gb|AAV74388.1| inosine 5'monophosphate dehydrogenase [Toxoplasma gondii]
          Length = 551

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/183 (21%), Positives = 72/183 (39%), Gaps = 11/183 (6%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLF 217
           + L        H   P  S+ M       +AI  AL+       N+        ++  + 
Sbjct: 37  VDLSTRITRNLHVRTPIVSSPMDTVTEHRMAIGCALMGGMGVIHNNMETARQVAEVQKVK 96

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFR 274
              +  +       +++    + D   I  +  +  V + D G    KL GI+T  DI  
Sbjct: 97  RYENGFI---LDPFVLRPSDSVADVYRIKEKYGYSSVPITDTGMLGGKLLGIVTSRDI-- 151

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           +F  D++T  + +VM  +  V  E   L  A +LLR+     L +V+D  + + ++   D
Sbjct: 152 DFLTDVHT-PLSEVMTSDLVVGHEPVQLAEANELLRESKKGKLPIVNDNFELVALISRND 210

Query: 335 LLR 337
           L +
Sbjct: 211 LKK 213


>gi|206563358|ref|YP_002234121.1| putative CBS-domain-containing protein [Burkholderia cenocepacia
           J2315]
 gi|198039398|emb|CAR55364.1| putative CBS-domain protein [Burkholderia cenocepacia J2315]
          Length = 143

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D G +L  I+T+ D+  R   H      
Sbjct: 8   MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-GTELVAIVTDRDLAVRALSHGHSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V  +  +  +ED  +    Q +    +  L V+D   K +G+V   D+  R G
Sbjct: 67  PVQAVASRPVQWCVEDDGVGDVQQRMADVQLHRLPVLDRSLKLVGMVSLGDIATRAG 123



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A +L+++ +I VL V D  +  + IV   DL
Sbjct: 4   VNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDGTE-LVAIVTDRDL 53


>gi|145300402|ref|YP_001143243.1| CBS domain-containing protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142853174|gb|ABO91495.1| CBS domain protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 136

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/88 (21%), Positives = 39/88 (44%), Gaps = 13/88 (14%)

Query: 265 GIITEGDIFRNFHKDLN------------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           G+I++ D+FR     L+                  +M + P  I     +   ++++ + 
Sbjct: 45  GVISDRDLFRAISPYLDSEAEMSRDTETLNRRAHQIMSRQPVTIASHLPVRDGVKIMLEK 104

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           N+S L V+ +    +GI+ + DLLR  +
Sbjct: 105 NVSCLPVL-ENGALVGIISWKDLLRAAL 131


>gi|157375206|ref|YP_001473806.1| DNA-binding transcriptional regulator HexR [Shewanella sediminis
           HAW-EB3]
 gi|157317580|gb|ABV36678.1| transcriptional regulator, RpiR family [Shewanella sediminis
           HAW-EB3]
          Length = 284

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/162 (17%), Positives = 63/162 (38%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q   +   + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSMDTAAINKAVDILTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+I+++S +G +  +  I   AR     +I +T+   S ++   
Sbjct: 161 DDVLMQRMSCINSGEGDVIVLISHTGRTKSMIDIARIARENGAAVIGLTAR-NSPLSSEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + +T+    ++  +   P  S + QL + D LA      R 
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVVIDVLATGFTLRRG 259


>gi|39937301|ref|NP_949577.1| CBS domain-containing protein [Rhodopseudomonas palustris CGA009]
 gi|192293081|ref|YP_001993686.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           TIE-1]
 gi|39651159|emb|CAE29682.1| CBS domain [Rhodopseudomonas palustris CGA009]
 gi|192286830|gb|ACF03211.1| CBS domain containing membrane protein [Rhodopseudomonas palustris
           TIE-1]
          Length = 130

 Score = 65.3 bits (158), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 11/116 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH----------KDLNT 282
           V     + +         F    VV E Q++ G++T+ D    F            DL  
Sbjct: 8   VSRELTMRELEDKFEHDDFNAYPVV-EDQRVIGMVTKYDFLSCFAFHPTQMLPHYDDLMN 66

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            SV D+M  +   +  DT LT  +QL+ +H    + V+D  +K  GI+   D+++ 
Sbjct: 67  RSVGDIMSGDFLYVHSDTKLTRVLQLMVEHQTRSIPVLDADRKLDGIISREDVIKA 122



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/83 (20%), Positives = 31/83 (37%), Gaps = 5/83 (6%)

Query: 200 SENDF---YVLHPGGKLGTL--FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV 254
           ++ DF   +  HP   L      +  S           V     L   + ++ E +   +
Sbjct: 42  TKYDFLSCFAFHPTQMLPHYDDLMNRSVGDIMSGDFLYVHSDTKLTRVLQLMVEHQTRSI 101

Query: 255 AVVDEGQKLKGIITEGDIFRNFH 277
            V+D  +KL GII+  D+ +   
Sbjct: 102 PVLDADRKLDGIISREDVIKALA 124


>gi|300173645|ref|YP_003772811.1| transcriptional regulator [Leuconostoc gasicomitatum LMG 18811]
 gi|299888024|emb|CBL91992.1| transcription regulator [Leuconostoc gasicomitatum LMG 18811]
          Length = 282

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 55/155 (35%), Gaps = 3/155 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
               ++L +++          A   +   K RV   GIG S  +          T     
Sbjct: 102 AGATNALNATINNLTPALLDDASHYLIQAK-RVGFFGIGGSSIVAFNAYHKFLRTPLDVI 160

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                +        +  DD  +V+S SG + +   I    +   + +IAITS   S ++ 
Sbjct: 161 AHPDYDIQLMQAVKLDADDAAVVISHSGRNKDTLLIAQKLKENGVKVIAITSFADSPLSK 220

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            AD+VL      E         +S I Q+ I D L
Sbjct: 221 IADLVLL--SLAEEINFRSESMSSLIAQITIIDTL 253


>gi|296104448|ref|YP_003614594.1| putative transcriptional regulator [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
 gi|295058907|gb|ADF63645.1| putative transcriptional regulator [Enterobacter cloacae subsp.
           cloacae ATCC 13047]
          Length = 274

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 48/104 (46%)

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
           I G+  S  +G  L   L   G P+        +  +   ++   L++ +S SGS+ +L 
Sbjct: 129 IYGVAASAILGEYLHYKLLRLGKPAQLFSDMHRAAMNAATLSEGTLVVAISSSGSTRDLL 188

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
            ++  AR+  + ++++++  +S +A  +D+ L   K       G
Sbjct: 189 HVVKLARKRGVKVLSLSNTPRSPLASLSDMQLVAAKPEGPLSAG 232


>gi|237735801|ref|ZP_04566282.1| sugar isomerase [Mollicutes bacterium D7]
 gi|229381546|gb|EEO31637.1| sugar isomerase [Coprobacillus sp. D7]
          Length = 296

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 29/139 (20%), Positives = 55/139 (39%), Gaps = 2/139 (1%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
                A+  +K     + I   G + ++       +   G      +       ++  I 
Sbjct: 120 DDLQKALRLLKNS-NSIHIFSTGTALNLAESFKEKMLKIGKNVVISNNLNYQLYEVSCIP 178

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           + D+ I++S+SG +     I    +   IP+IAITS  ++ +A  A   LT+    ES  
Sbjct: 179 KGDIAIIISYSGETINTIKIAQTCKNNKIPIIAITSFGENTLAKLASCKLTIS-TKESLY 237

Query: 171 HGLAPTTSAIMQLAIGDAL 189
           H L   ++ +    + D L
Sbjct: 238 HNLGDFSTHLATHLMLDIL 256


>gi|169830568|ref|YP_001716550.1| glucosamine--fructose-6-phosphate aminotransferase [Candidatus
           Desulforudis audaxviator MP104C]
 gi|169637412|gb|ACA58918.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Candidatus Desulforudis audaxviator MP104C]
          Length = 609

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 16/169 (9%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIK-------GRVVITGIGKS---GHIGSKLASTLAST 89
           +L  +L+G +      AV     ++        ++ +T  G +   G +G  +   L   
Sbjct: 262 ALRDTLRGRIDDDCRRAVLDELNLEPGFVKNLNKIFVTACGTAFHAGVVGKYIIEKLVRL 321

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
             P     A+E  + D  +I   DL++V+S SG + + +A L  A+     ++AIT+   
Sbjct: 322 --PVEVDIASEFRYRD-PLIGPGDLVVVVSQSGETADTRAALREAKSRGARVVAITNVVG 378

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           S +A  AD VL     PE     +A T + + QLA    LA+ L   R 
Sbjct: 379 SSIAREADSVLYTWAGPEIA---VASTKAYVTQLAAFYLLAVWLAGERG 424


>gi|152997999|ref|YP_001342834.1| CBS domain-containing protein [Marinomonas sp. MWYL1]
 gi|150838923|gb|ABR72899.1| CBS domain containing protein [Marinomonas sp. MWYL1]
          Length = 140

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 47/117 (40%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN------------FHKDLN 281
           +    L  A  ++ EK    + +V++  +  G++T+ +  R+              K   
Sbjct: 16  RENDSLAKAKALMQEKNIRNIPIVNDEGECVGMLTQREYLRHAFHLVSQFGTQQISKKEQ 75

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              + + M K+   +  +T L +A +   ++    L V     K IGI+  +D ++ 
Sbjct: 76  QTPIANAMNKDILTVSPETDLDMAAEFFIENKYGCLPVT-QDNKLIGIITPVDFVKL 131



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 31/54 (57%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +V D+MI N   + E+  L  A  L+++ NI  + +V+D  + +G++   + LR
Sbjct: 3   TVADLMITNLITLRENDSLAKAKALMQEKNIRNIPIVNDEGECVGMLTQREYLR 56


>gi|73668501|ref|YP_304516.1| hypothetical protein Mbar_A0964 [Methanosarcina barkeri str.
           Fusaro]
 gi|72395663|gb|AAZ69936.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
          Length = 217

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 19/104 (18%), Positives = 45/104 (43%), Gaps = 5/104 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIKN 292
              +      +  +  G V +  E  K  GIITE D  +      K  + +   +++   
Sbjct: 44  NSDIPAIAREMVSRDAGSVIIT-ENGKAIGIITERDFVKGIVTEDKKPDEVKASEILSTP 102

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +  +T +  A +++ + N+  L V+++  + +G++   D+L
Sbjct: 103 LITVEPETSIVEASEIMLKANVKRLPVLENS-RIVGVISNTDIL 145


>gi|158314271|ref|YP_001506779.1| signal-transduction protein [Frankia sp. EAN1pec]
 gi|158109676|gb|ABW11873.1| putative signal-transduction protein with CBS domains [Frankia sp.
           EAN1pec]
          Length = 144

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNT 282
                  V     L  A  ++ +   G + +     +L GIIT+ DI  N     +D  +
Sbjct: 8   MHGDAKCVGADESLASAARMMRDLGVGALPICGADDRLGGIITDRDIVINCVAEGRDPAS 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               D+    P  +  D  L   +  + +H +  + V+D+ ++ +G++   DL R
Sbjct: 68  TRAGDLGKGKPLFVRADADLDTVLNEMMEHRVMRMPVIDN-KRLVGMISEADLAR 121



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 24/54 (44%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D+M  + K +  D  L  A +++R   +  L +     +  GI+   D++
Sbjct: 2   TTARDIMHGDAKCVGADESLASAARMMRDLGVGALPICGADDRLGGIITDRDIV 55



 Score = 37.2 bits (85), Expect = 3.5,   Method: Composition-based stats.
 Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 1/57 (1%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
            V+    L   +  + E R   + V+D  ++L G+I+E D+ RN   +     VE +
Sbjct: 80  FVRADADLDTVLNEMMEHRVMRMPVID-NKRLVGMISEADLARNLSGEKLGALVEAI 135


>gi|150006764|ref|YP_001301507.1| inosine 5-monophosphate dehydrogenase [Parabacteroides distasonis
           ATCC 8503]
 gi|255016507|ref|ZP_05288633.1| inosine 5-monophosphate dehydrogenase [Bacteroides sp. 2_1_7]
 gi|256842280|ref|ZP_05547784.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|301309029|ref|ZP_07214974.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
 gi|149935188|gb|ABR41885.1| putative inosine-5'-monophosphate dehydrogenase [Parabacteroides
           distasonis ATCC 8503]
 gi|256736164|gb|EEU49494.1| inosine-5'-monophosphate dehydrogenase [Parabacteroides sp. D13]
 gi|300833055|gb|EFK63680.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 20_3]
          Length = 497

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 10/167 (5%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            +S      P  SAIMQ   G  LAI L  +RN   +  +   P      +         
Sbjct: 44  EKSAIELNIPFVSAIMQSVSGPKLAIEL--ARNGGLSFIFGSQPIESQADMVRKVKKFKA 101

Query: 226 SGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLN 281
                   +     L D + ++       + V D+     KL G++T  D      KD  
Sbjct: 102 GFVISDSNLTPENTLADVLELVRRTEHSTIGVTDDGTPNGKLLGMVTSRDYRE--GKDPI 159

Query: 282 TLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + V+D M    K+I+ +    L  A Q++  H ++ L ++D  QK 
Sbjct: 160 DMKVKDFMTPFAKLIVGELGMTLKEANQIIWDHKLNTLPIIDKDQKL 206


>gi|325566999|ref|ZP_08143777.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
 gi|325159171|gb|EGC71316.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
          Length = 250

 Score = 64.9 bits (157), Expect = 1e-08,   Method: Composition-based stats.
 Identities = 28/136 (20%), Positives = 56/136 (41%), Gaps = 3/136 (2%)

Query: 28  LRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           ++++  E   L+ L  +       +F  AV  +   K  ++  G+G S  +    +   +
Sbjct: 79  VKTLDFESELLNFLARTQDKFFEDKFDEAVHLLME-KELIIFIGVGSSNVVAEYGSLYFS 137

Query: 88  STGTPSFFV-HAAEASHGDLGM-ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAIT 145
           S    +  +   +      L   + +   I+ LS SG + E+   L +       +I IT
Sbjct: 138 SLFNMAIRIEDPSNYPINYLSTELAKKMCIVALSVSGETTEIIQYLNHLNLSESSVIGIT 197

Query: 146 SENKSVVACHADIVLT 161
           S + S ++  ADI +T
Sbjct: 198 SSSNSTLSKLADISIT 213


>gi|90416234|ref|ZP_01224166.1| inosine-5-monophosphate dehydrogenase [marine gamma proteobacterium
           HTCC2207]
 gi|90331959|gb|EAS47173.1| inosine-5-monophosphate dehydrogenase [marine gamma proteobacterium
           HTCC2207]
          Length = 491

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/170 (20%), Positives = 61/170 (35%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAIA+              +     ++  +    S V+    + 
Sbjct: 41  NIPLVSAAMDTVTEARLAIAIAAEGGVGIIHKSMTIEQQAKEVLAVKKYESGVVKDPFT- 99

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             ++    L +   +        + V+ E   L GI+T  D+   F  D++ L V  VM 
Sbjct: 100 --IQADATLAELYALTVANNISGLPVL-EDGNLVGIVTRRDVR--FATDMDAL-VTSVMT 153

Query: 291 KN--PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  + E         LL +H I  ++VV+D  +  G++   D+ + 
Sbjct: 154 PKAELVTVKEGADPDEVRALLHEHRIEKVLVVNDAFELKGLITVTDIDKA 203


>gi|238794190|ref|ZP_04637805.1| Transcriptional regulator [Yersinia intermedia ATCC 29909]
 gi|238726480|gb|EEQ18019.1| Transcriptional regulator [Yersinia intermedia ATCC 29909]
          Length = 274

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/109 (24%), Positives = 48/109 (44%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V I G+  S  IG  L   L   G P+        +  +   +  +D++I +S SGS+ +
Sbjct: 127 VQIYGVAASAIIGDFLQYKLLRVGKPALLFSDMHRAAMNASSLGLNDMLIAISSSGSTKD 186

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           +   +  A++    +I I++  +S +A  AD +L   K       G  P
Sbjct: 187 ILHAVTLAKQRQARVIVISNTQRSPLAKLADTLLVAAKPEGPLNAGTLP 235


>gi|303247185|ref|ZP_07333459.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
 gi|302491344|gb|EFL51232.1| CBS domain containing membrane protein [Desulfovibrio
           fructosovorans JJ]
          Length = 152

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/140 (18%), Positives = 48/140 (34%), Gaps = 29/140 (20%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII----------------- 267
                +  +     +  A  +L EK F  + V++   KL GI+                 
Sbjct: 7   MMTSDVVTITEDTEISAAAKLLLEKGFNGMPVLNAAGKLTGILCQADLVAQQKKLSLPSV 66

Query: 268 -----------TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                      +  D+ R   K ++ L+    M +NP  +  +T +     L+       
Sbjct: 67  FSLLDGFIPLGSMKDLDREVEK-MSALTAVHAMSRNPATVSPETGIDEVASLMTDKGYHT 125

Query: 317 LMVVDDCQKAIGIVHFLDLL 336
           + V D   K +GI+   D+L
Sbjct: 126 IPVTDAQGKVVGIIGMSDVL 145



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 16/54 (29%), Positives = 29/54 (53%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +D+M  +   I EDT ++ A +LL +   + + V++   K  GI+   DL+
Sbjct: 2   LKAKDMMTSDVVTITEDTEISAAAKLLLEKGFNGMPVLNAAGKLTGILCQADLV 55


>gi|298377726|ref|ZP_06987677.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
 gi|298265429|gb|EFI07091.1| inosine-5'-monophosphate dehydrogenase [Bacteroides sp. 3_1_19]
          Length = 497

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 10/167 (5%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            +S      P  SAIMQ   G  LAI L  +RN   +  +   P      +         
Sbjct: 44  EKSAIELNIPFVSAIMQSVSGPKLAIEL--ARNGGLSFIFGSQPIENQADMVRKVKKFKA 101

Query: 226 SGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLN 281
                   +     L D + ++       + V D+     KL G++T  D      KD  
Sbjct: 102 GFVISDSNLTPENTLADVLELVRRTEHSTIGVTDDGTPNGKLLGMVTSRDYRE--GKDPI 159

Query: 282 TLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + V+D M    K+I+ +    L  A Q++  H ++ L ++D  QK 
Sbjct: 160 DMKVKDFMTPFAKLIVGELGMTLKEANQIIWDHKLNTLPIIDKDQKL 206


>gi|237735023|ref|ZP_04565504.1| sugar isomerase [Mollicutes bacterium D7]
 gi|229381799|gb|EEO31890.1| sugar isomerase [Coprobacillus sp. D7]
          Length = 291

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 6/147 (4%)

Query: 29  RSIIAEKRGLSSLE-SSLQGELS----FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
            SI+     ++ L+  SL   LS         AV  ++     V + G+        +  
Sbjct: 86  DSIMNIANKITQLKTESLNDTLSLIHHDTLQKAVRALQKSNT-VKVFGVSNLSFPAEEFV 144

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +         + +  M   +DL I LS+SG S E+  I    ++ ++P+IA
Sbjct: 145 FKLRHIGKNAEVFVLNSNIYQEAMMANSNDLGICLSYSGESGEIIKIANILKKKNVPIIA 204

Query: 144 ITSENKSVVACHADIVLTLPKEPESCP 170
           ITS  ++ +   ADIVL +    +S  
Sbjct: 205 ITSIGENSLTRLADIVLRVTTREKSYS 231


>gi|254490142|ref|ZP_05103333.1| 6-phospho 3-hexuloisomerase [Methylophaga thiooxidans DMS010]
 gi|224464628|gb|EEF80886.1| 6-phospho 3-hexuloisomerase [Methylophaga thiooxydans DMS010]
          Length = 179

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/176 (19%), Positives = 68/176 (38%), Gaps = 11/176 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ +  +    L  +F    +  K    R+ ITG G+S  +G+ L   L  +G   +   
Sbjct: 12  ITDILGATDSSLESEFVAMCDDAK----RIFITGAGRSKLVGNFLGMRLMHSGYTVYVQG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL+IV+S SG + +L +    A+  +  ++ I S++ S +   AD
Sbjct: 68  EISTP-----SIREGDLLIVISGSGETTQLVSFANKAKSENAKVVLICSKSSSTIGDMAD 122

Query: 158 IVLTLPKEPESCPHGLAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLHPGG 211
             + +  +    P    P  +      L   +++   L+  +   E +    H   
Sbjct: 123 KTIQIGTDDSFAPTKGMPMGTMFELSTLIFLESIVSHLIHEKGIPEEEMKYRHANM 178


>gi|120612412|ref|YP_972090.1| CBS domain-containing protein [Acidovorax citrulli AAC00-1]
 gi|120590876|gb|ABM34316.1| CBS domain containing membrane protein [Acidovorax citrulli
           AAC00-1]
          Length = 224

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +     G +     +     + +  S+  V     + DA   L+E       VVD    +
Sbjct: 70  YAQTEQGPQQARQPLTRVRDVMTSGSLS-VPPDVRVNDAWQTLAEYHVAQAPVVDAQGHV 128

Query: 264 KGIITEGDIFR----------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            G++   D+                DL    V +VM+     +  DT L     +L    
Sbjct: 129 VGLLLRADMAPLDLLPEPGSVKAAIDLARRPVSEVMVSPVPTVAPDTELRRVAGVLLDTG 188

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L V D+     G +   D+LR 
Sbjct: 189 LPGLPVTDEYGTLAGFISRTDILRA 213



 Score = 38.0 bits (87), Expect = 2.5,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 22/73 (30%), Gaps = 1/73 (1%)

Query: 208 HPGG-KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            PG  K                 +P V     L     +L +     + V DE   L G 
Sbjct: 145 EPGSVKAAIDLARRPVSEVMVSPVPTVAPDTELRRVAGVLLDTGLPGLPVTDEYGTLAGF 204

Query: 267 ITEGDIFRNFHKD 279
           I+  DI R    D
Sbjct: 205 ISRTDILRAVAAD 217


>gi|15922637|ref|NP_378306.1| hypothetical protein ST2304 [Sulfolobus tokodaii str. 7]
 gi|15623427|dbj|BAB67415.1| 375aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 375

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 44/86 (51%), Gaps = 3/86 (3%)

Query: 253 CVAVVDEGQKLKGIIT-EGDIFRNFHKD-LNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
            + VVD+ ++L GII+ EG +     +  +    V +VM      I  +  +  A  L+ 
Sbjct: 93  ALIVVDDKKRLVGIISREGFLSYYLSRGEIPDAKVREVMNSPVITIDANDSVARARWLMS 152

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++S L V+ + +K +GIV   D++
Sbjct: 153 NNHVSKLPVL-ENKKLVGIVTTRDIV 177



 Score = 54.5 bits (130), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 21/118 (17%), Positives = 43/118 (36%), Gaps = 16/118 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--------- 276
               +  +     +  A  ++S      + V+ E +KL GI+T  DI             
Sbjct: 131 MNSPVITIDANDSVARARWLMSNNHVSKLPVL-ENKKLVGIVTTRDIVNRLYSEGGKKKS 189

Query: 277 -----HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 + L  L V ++M         +  +  A++ L +  IS + V+ +    +G+
Sbjct: 190 SILTEEERLMALPVREIMTYPVITTDGNQNVKQALETLLRRKISGMPVI-EGDLIVGM 246


>gi|126090165|ref|YP_001041646.1| DNA-binding transcriptional regulator HexR [Shewanella baltica
           OS155]
 gi|126174458|ref|YP_001050607.1| DNA-binding transcriptional regulator HexR [Shewanella baltica
           OS155]
 gi|153000653|ref|YP_001366334.1| DNA-binding transcriptional regulator HexR [Shewanella baltica
           OS185]
 gi|160875287|ref|YP_001554603.1| DNA-binding transcriptional regulator HexR [Shewanella baltica
           OS195]
 gi|217973426|ref|YP_002358177.1| DNA-binding transcriptional regulator HexR [Shewanella baltica
           OS223]
 gi|304408681|ref|ZP_07390302.1| transcriptional regulator, RpiR family [Shewanella baltica OS183]
 gi|307305510|ref|ZP_07585258.1| transcriptional regulator, RpiR family [Shewanella baltica BA175]
 gi|125997663|gb|ABN61738.1| transcriptional regulator, RpiR family [Shewanella baltica OS155]
 gi|125999821|gb|ABN63891.1| hypothetical protein Sbal_4528 [Shewanella baltica OS155]
 gi|151365271|gb|ABS08271.1| transcriptional regulator, RpiR family [Shewanella baltica OS185]
 gi|160860809|gb|ABX49343.1| transcriptional regulator, RpiR family [Shewanella baltica OS195]
 gi|217498561|gb|ACK46754.1| transcriptional regulator, RpiR family [Shewanella baltica OS223]
 gi|304352502|gb|EFM16899.1| transcriptional regulator, RpiR family [Shewanella baltica OS183]
 gi|306911813|gb|EFN42238.1| transcriptional regulator, RpiR family [Shewanella baltica BA175]
 gi|315267481|gb|ADT94334.1| transcriptional regulator, RpiR family [Shewanella baltica OS678]
          Length = 284

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/167 (18%), Positives = 61/167 (36%), Gaps = 4/167 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K  +   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSLDISAINKAVDILTQAKT-ISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+++++S +G +  L  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSNEGDVVVLISHTGRTKSLIEIARLARENGAAVIGITAR-NSPLSMEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
            + +T+    ++  +   P  S + QL   D LA      R     D
Sbjct: 220 TLPVTMEVPEDTDMY--LPMASRLAQLVTIDVLATGFTLRRGPRFRD 264


>gi|332704437|ref|ZP_08424525.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfovibrio africanus str.
           Walvis Bay]
 gi|332554586|gb|EGJ51630.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfovibrio africanus str.
           Walvis Bay]
          Length = 613

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 1/105 (0%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
            G  L +A   L+E       ++D G+   GI+TE D+ R   ++  +    D       
Sbjct: 165 PGLSLAEAAGRLAEAG-AASCLLDLGEGSLGILTERDVVRAVAQNAGSRPARDFASSPLV 223

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            +    LL  A   + Q NI  L++  +  +   IV   DLL  G
Sbjct: 224 TMDRSRLLVEAFAAMVQKNIRRLVLTGEDGRPRAIVEERDLLSSG 268


>gi|237714525|ref|ZP_04545006.1| nucleotidyltransferase [Bacteroides sp. D1]
 gi|262406389|ref|ZP_06082938.1| nucleotidyltransferase [Bacteroides sp. 2_1_22]
 gi|294643269|ref|ZP_06721095.1| nucleotidyl transferase [Bacteroides ovatus SD CC 2a]
 gi|294806463|ref|ZP_06765304.1| nucleotidyl transferase [Bacteroides xylanisolvens SD CC 1b]
 gi|229445294|gb|EEO51085.1| nucleotidyltransferase [Bacteroides sp. D1]
 gi|262355092|gb|EEZ04183.1| nucleotidyltransferase [Bacteroides sp. 2_1_22]
 gi|292641392|gb|EFF59584.1| nucleotidyl transferase [Bacteroides ovatus SD CC 2a]
 gi|294446326|gb|EFG14952.1| nucleotidyl transferase [Bacteroides xylanisolvens SD CC 1b]
          Length = 344

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 45/109 (41%), Gaps = 3/109 (2%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGC--VAVVDEGQKLKGIITEGDIFRNFHKDLNTL-S 284
               ++     + DA+  ++        + VV+  Q++ G +T+GDI R          +
Sbjct: 1   MRKYIISETASVRDALVAINNITHDGELLIVVNAAQQMVGSLTDGDIRRGLIAGAELTDT 60

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           +  +M ++ K I ++      ++  R   I  + ++D     + +V+  
Sbjct: 61  INKIMHRDFKFIKQEDYDVAHLKSFRDRRIMFIPILDAENHVVDVVNLQ 109


>gi|241951668|ref|XP_002418556.1| inosine-5'-monophosphate dehydrogenase [Candida dubliniensis CD36]
 gi|58119409|gb|AAW65380.1| inosine-5'-monophosphate dehydrogenase [Candida dubliniensis]
 gi|223641895|emb|CAX43858.1| inosine-5'-monophosphate dehydrogenase [Candida dubliniensis CD36]
          Length = 521

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)

Query: 228 DSIPLVKIGCPLIDAITILSEK-RFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTL 283
           +   ++     + +    + E   F    V + G    KL GIIT  DI   FH+D +  
Sbjct: 121 NDPVVISPEVTVGEV-KKMHETLGFTSFPVTENGKVGGKLVGIITSRDI--QFHED-DKS 176

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            V +VM ++  V  +   LT   +LLR      L +VDD    + ++   DL +
Sbjct: 177 PVSEVMTRDLVVGKKGISLTDGNELLRSSKKGKLPIVDDEGNLVSLISRTDLQK 230


>gi|254410199|ref|ZP_05023979.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
 gi|196183235|gb|EDX78219.1| PAS fold family [Microcoleus chthonoplastes PCC 7420]
          Length = 1855

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 58/157 (36%), Gaps = 42/157 (26%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGC--------------- 253
           P            D++    +   V +  P+++ +  +S+   GC               
Sbjct: 8   PNQPWCFHSPQLDDIL--DRTPVTVTLDTPVVEVLARMSQ-VQGCSCSQEGEKTPESPQN 64

Query: 254 --------VAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
                     +V +G +L GI TE D+ R     ++L  +S+  VM         D  L 
Sbjct: 65  PLLSPSTSCVLVTQGTQLVGIFTERDVVRLTAQGRNLAGVSIRQVMSP------PDYRLK 118

Query: 304 V--------AMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                     + +L+Q+ I  L VVDD ++ +G++  
Sbjct: 119 SSEFRDVFSVLGILKQYQIRHLPVVDDQEQLLGLITL 155



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 2/84 (2%)

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILED 299
            + IL + +   + VVD+ ++L G+IT   +         L   +V++VM +       D
Sbjct: 128 VLGILKQYQIRHLPVVDDQEQLLGLITLSTLRSVIEPSHLLKLRTVDEVMNRTVIQATVD 187

Query: 300 TLLTVAMQLLRQHNISVLMVVDDC 323
           T +    QL+ +H +S +++    
Sbjct: 188 TSVLKLAQLMARHRVSCVVICQAD 211



 Score = 52.6 bits (125), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 2/81 (2%)

Query: 259 EGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
             QK  GIITE DI +      +L+ L  +DVM +    +     L  A Q +++  +  
Sbjct: 268 NQQKPVGIITERDIVQFQVLGVNLSGLQAKDVMSQPLFYLRTQDNLWHAHQEMQRRYVRR 327

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L+V  D  + +GIV    LL+
Sbjct: 328 LVVTGDQGELLGIVTQTRLLQ 348


>gi|126457682|ref|YP_001077120.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
 gi|126231450|gb|ABN94863.1| CBS domain protein [Burkholderia pseudomallei 1106a]
          Length = 291

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 6/123 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNF 276
            +        +   +    ++DA  ++ ++  G + VVD+        G++T+ DI  + 
Sbjct: 143 VNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSL 202

Query: 277 ---HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D   L V ++M     V+ E   L    Q +R   +  + VV+     +G+V   
Sbjct: 203 IAKEVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVD 262

Query: 334 DLL 336
           DLL
Sbjct: 263 DLL 265


>gi|6467900|gb|AAF13230.1|AF196975_1 inosine 5'-monophosphate dehydrogenase [Pneumocystis carinii]
          Length = 529

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 61/172 (35%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  S+ M       +AI L            V+H    +         V    +    
Sbjct: 72  KTPFMSSPMDTVTESDMAINLALLGGIG-----VIHHNCTIEEQTEMVRKVKKFENGFIT 126

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSV 285
           S  ++ +   + D   I  E  F  + + D      KL GI+T  DI   FH +  +  +
Sbjct: 127 SPIVLSLNHRVRDVRRIKEELGFSGIPITDTGQLNGKLLGIVTSRDI--QFHNNDESF-L 183

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +VM K+     E   L  A ++LR      L +VD       ++   DL++
Sbjct: 184 SEVMTKDLVTGSEGIRLEEANEILRSCKKGKLPIVDKEGNLTALLSRSDLMK 235


>gi|313117279|ref|YP_004044262.1| CBS-domain-containing membrane protein [Halogeometricum borinquense
           DSM 11551]
 gi|312294170|gb|ADQ68601.1| CBS-domain-containing membrane protein [Halogeometricum borinquense
           DSM 11551]
          Length = 140

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 48/122 (39%), Gaps = 6/122 (4%)

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---R 274
           +  SD+M                +    + ++  G V VV+   +  GI+T+ D+     
Sbjct: 1   MTVSDLMRKNVVTA--TPDTAASELAQQMRDENVGSV-VVEADNRPAGIVTDRDLAVGPF 57

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
               D  T++ EDVM  +   +  DT +      L + ++  + VVD      GIV   D
Sbjct: 58  AESADPETVTAEDVMTSDLTTVTTDTGVMELCDELCEASVRRMPVVDGDGTLAGIVTLDD 117

Query: 335 LL 336
           L 
Sbjct: 118 LH 119


>gi|292492011|ref|YP_003527450.1| peptidase M50 [Nitrosococcus halophilus Nc4]
 gi|291580606|gb|ADE15063.1| peptidase M50 [Nitrosococcus halophilus Nc4]
          Length = 404

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/132 (18%), Positives = 48/132 (36%), Gaps = 13/132 (9%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLI---DAITILSEKRFGCVAVVDEGQKLKGIITE 269
           +  +                V     +    D   + +E+R      V+E  +L G+I  
Sbjct: 258 VREVLEDVPVSQIMQTDFIKVTPEMEVSAFVDEHLMRTEQR---AFPVEENNRLAGMICL 314

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKV----ILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
            D+ +   +   + ++ D+M   P         +     A+  L   N++ L VV+   K
Sbjct: 315 SDLRKISREAWTSTTIRDIMT--PASEIALTSPEKDAAEALFTLAHRNVNQLPVVEKD-K 371

Query: 326 AIGIVHFLDLLR 337
             G++   DLL+
Sbjct: 372 ICGLIRREDLLK 383


>gi|256072875|ref|XP_002572759.1| inosine-5-monophosphate dehydrogenase [Schistosoma mansoni]
 gi|238657923|emb|CAZ28991.1| inosine-5-monophosphate dehydrogenase, putative [Schistosoma
           mansoni]
          Length = 509

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/172 (21%), Positives = 68/172 (39%), Gaps = 11/172 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIA--LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AIA  L  S  F  N+  V     ++  +       +    S 
Sbjct: 57  KVPFASSPMDTVTEAKMAIAMSLCGSIGFVHNNCSVEAQANEVKKVKKYNQGFI---LSP 113

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            +V    P+ D I I  +  FG + V ++G    +L G++T  D+      +     VE 
Sbjct: 114 VVVSPRQPIYDIIEIKKKYGFGGIPVTEDGYMGSRLVGLVTLRDV-DFLDPNDFNTPVEK 172

Query: 288 VMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM    +         L+ A  LLR+     L ++++ ++ + ++   DL +
Sbjct: 173 VMTPFDDLVTAFSGVTLSEANDLLRKSKKGKLPIINENRELVALIARTDLKK 224


>gi|19704130|ref|NP_603692.1| CBS domain-containing protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
 gi|19714340|gb|AAL94991.1| CBS domain containing protein [Fusobacterium nucleatum subsp.
           nucleatum ATCC 25586]
          Length = 198

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 14/157 (8%)

Query: 183 LAIGDALAIALLESRNFSENDFYVL--------HPGGKLGTLFVCASDVMHSGDSIPLVK 234
           L  GD +A  L  +++    DF +L                       V         + 
Sbjct: 19  LLSGDEIAQNLNVTKSALRTDFSILTRLKLITAKQNKGYIYNKCTIKRVRDCMSPQNSIS 78

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
           +   + DAI  L     G + VV E +KL GII+  D+ +     K++  + V  +M + 
Sbjct: 79  VKTSVYDAIIHLFNFDLGTLIVV-ENEKLVGIISRKDLLKAALNGKNIERIPVSMIMTRM 137

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQKA 326
           P ++   ED  +  A++ L +H I  L V+  +  K 
Sbjct: 138 PNIVHCFEDDNIMEAIEKLIKHEIDSLPVLRKEKGKL 174


>gi|303272725|ref|XP_003055724.1| predicted protein [Micromonas pusilla CCMP1545]
 gi|226463698|gb|EEH60976.1| predicted protein [Micromonas pusilla CCMP1545]
          Length = 559

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/130 (16%), Positives = 44/130 (33%), Gaps = 13/130 (10%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGDIFRNFHKDL 280
            V  +   +  V      ++A +++  +    V VV E   KL  +++  D+        
Sbjct: 405 AVAQNRGDVVCVLPTTRTLEAFSLMYSEGVSAVGVVAEPRGKLVDVLSVSDLRGFVKLPT 464

Query: 281 NTLSVEDVMI------------KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             LSVE+                N   +  D  +   +  +    +  + V D     IG
Sbjct: 465 LDLSVEEFKSLDARHRSYPGGDANVVSVRPDADIGDVLSKMAARKVHHVFVTDLDGAPIG 524

Query: 329 IVHFLDLLRF 338
           ++   D+L  
Sbjct: 525 MITPTDILSA 534



 Score = 41.0 bits (95), Expect = 0.23,   Method: Composition-based stats.
 Identities = 10/44 (22%), Positives = 19/44 (43%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V+    + D ++ ++ ++   V V D      G+IT  DI    
Sbjct: 492 VRPDADIGDVLSKMAARKVHHVFVTDLDGAPIGMITPTDILSAM 535


>gi|145297349|ref|YP_001140190.1| CBS domain-containing protein [Aeromonas salmonicida subsp.
           salmonicida A449]
 gi|142850121|gb|ABO88442.1| CBS domain protein [Aeromonas salmonicida subsp. salmonicida A449]
          Length = 140

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 47/118 (39%), Gaps = 5/118 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT-- 282
           H G     +     L +A+  L +     + V+D+ Q+L G ++E D   +         
Sbjct: 7   HMGRLTHFLTPQLGLAEALDRLHQSGLSGLPVLDDQQQLVGFLSEQDCIPSLITGSYHCD 66

Query: 283 --LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
               VED+M + P  +  D  +    + +      +  V+ +  K IGI+    +++ 
Sbjct: 67  TRTQVEDMMSRTPLSVDPDDSILDLARQMTGAKPKIYPVL-EQGKVIGIISRHQVMQA 123



 Score = 41.0 bits (95), Expect = 0.25,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L + D M +    +     L  A+  L Q  +S L V+DD Q+ +G +   D +
Sbjct: 2   LHIRDHMGRLTHFLTPQLGLAEALDRLHQSGLSGLPVLDDQQQLVGFLSEQDCI 55


>gi|229542024|ref|ZP_04431084.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
 gi|229326444|gb|EEN92119.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
          Length = 611

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/140 (25%), Positives = 59/140 (42%), Gaps = 9/140 (6%)

Query: 66  RVVITGIGKS---GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
           R+ I   G S   G IG K+  T+      +         HG L       L+I +S SG
Sbjct: 296 RITIVASGTSHHAGMIGKKILETMLDIPVEAAIASEFRCEHGRL---DEKTLVIAISQSG 352

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +  + L  A++    +IAI++  KS +A  +D V+     PE     +A T +   Q
Sbjct: 353 ETADTISALKEAKKSGAAVIAISNYRKSTLARKSDCVIYTHAGPE---LAVAATKAYTTQ 409

Query: 183 LAIGDALAIALLESRNFSEN 202
           +     L+I L +  + S  
Sbjct: 410 ITALVLLSIVLAKKLHGSGE 429


>gi|296241770|ref|YP_003649257.1| glutamine--fructose-6-phosphate transaminase [Thermosphaera
           aggregans DSM 11486]
 gi|296094354|gb|ADG90305.1| glutamine--fructose-6-phosphate transaminase [Thermosphaera
           aggregans DSM 11486]
          Length = 613

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/129 (23%), Positives = 55/129 (42%), Gaps = 2/129 (1%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST-GTPSFFVHA 98
           ++  +L G L+ Q      K+    G++ +TG G S H     + T     G P     +
Sbjct: 272 AVMETLYGALNDQLIPEAVKLLIDAGKIYVTGAGTSFHAAEHFSITGTKLAGKPIISFIS 331

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +E     L   +  D++IV+S SG + +    L   +R    +I++++   S +   + I
Sbjct: 332 SEYDTY-LPATSEGDVLIVVSQSGETMDSLKALRAFKRRGARIISVSNVIDSAIPRESHI 390

Query: 159 VLTLPKEPE 167
            L     PE
Sbjct: 391 TLYTRAGPE 399


>gi|238060033|ref|ZP_04604742.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
 gi|237881844|gb|EEP70672.1| RpiR family transcriptional regulator [Micromonospora sp. ATCC
           39149]
          Length = 318

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/148 (20%), Positives = 58/148 (39%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A   I     RV I G   S  +G ++  +L   G  ++             ++ 
Sbjct: 149 AEVERAAVAIAGAS-RVNIFGASGSALVGEEMQFSLHRIGVAAWAWSDVHEGLASAALLG 207

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ + +S +G + E   +L  A       +A+T   +S +A  AD+VL      ++  
Sbjct: 208 PGDVALGISHTGQTRETIEMLAEAGSRGATTVALTGFPRSPLAELADLVLLT--ASQATT 265

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
                 ++   QL + D L IA+ +  +
Sbjct: 266 FRPDALSARHPQLVVLDLLYIAVAQRTH 293


>gi|225575735|ref|ZP_03784345.1| hypothetical protein RUMHYD_03828 [Blautia hydrogenotrophica DSM
           10507]
 gi|225037048|gb|EEG47294.1| hypothetical protein RUMHYD_03828 [Blautia hydrogenotrophica DSM
           10507]
          Length = 280

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/144 (20%), Positives = 51/144 (35%), Gaps = 2/144 (1%)

Query: 59  KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVL 118
           KI   K R+ + G G SG    ++       G     +   E    +  +I+ D  +I +
Sbjct: 118 KILTTKKRIYVYGRGSSGLAADEMRFRFMRIGLNIVSITDHEMMRMNTVVISNDCAVIGI 177

Query: 119 SWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTS 178
           S SG ++ +   L  +++     I +TS  +       D VL    +           + 
Sbjct: 178 SVSGQTEAVINSLRESKKQGAATILMTSCKEREFQKFCDEVLLFAVKEH--LENGKAISP 235

Query: 179 AIMQLAIGDALAIALLESRNFSEN 202
               L + D L    L+S  F   
Sbjct: 236 QFPILVMLDLLYSRFLQSDKFRRE 259


>gi|154295956|ref|XP_001548411.1| inosine 5-monophosphate dehydrogenase [Botryotinia fuckeliana
           B05.10]
 gi|150843783|gb|EDN18976.1| inosine 5-monophosphate dehydrogenase [Botryotinia fuckeliana
           B05.10]
          Length = 549

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/187 (19%), Positives = 62/187 (33%), Gaps = 18/187 (9%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           +++VL  P           P  S+ M       +AI +            V+H       
Sbjct: 73  SEVVLDSPVTKRVTL--KTPFVSSPMDTVTEHDMAIHMALQGGLG-----VIHHNCSADE 125

Query: 216 LFVCASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIIT 268
                  V    +   L          + +   +  +  FG   V + G+   KL GI+T
Sbjct: 126 QAEMVQKVKRYENGFILDPVVLSPQATVGEVKDLKEKWGFGGYPVTETGKLGSKLVGIVT 185

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI      + ++ SV  VM+ +       T L  A  +L +     L +VD     + 
Sbjct: 186 NRDI----QFEDDSASVSSVMVTDLVTASYGTELIEANAILAKSKKGKLPIVDKDGNLVS 241

Query: 329 IVHFLDL 335
           ++   DL
Sbjct: 242 MISRSDL 248


>gi|91788620|ref|YP_549572.1| signal-transduction protein [Polaromonas sp. JS666]
 gi|91697845|gb|ABE44674.1| putative signal-transduction protein with CBS domains [Polaromonas
           sp. JS666]
          Length = 124

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/114 (21%), Positives = 41/114 (35%), Gaps = 3/114 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTL 283
               + LV +          +  K    V V +    + G+I+  D+ R     K    +
Sbjct: 9   MHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRLHAEGKPFQKV 68

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           S   +    P  +  D  L+    L+   NI   +VV +     G+V  LD +R
Sbjct: 69  SAWQLCTYKPITVRPDATLSEVASLMVAMNIHH-VVVAEGTHIKGVVSSLDFVR 121



 Score = 36.8 bits (84), Expect = 5.6,   Method: Composition-based stats.
 Identities = 9/57 (15%), Positives = 22/57 (38%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +  +M +   ++  D         +    +S + V +     +G++   DLLR 
Sbjct: 2   SKKISSLMHREVCLVGLDDTAQSVEAQMVAKGLSWVPVANADGVVLGVISSADLLRL 58


>gi|116491319|ref|YP_810863.1| CBS domain-containing protein [Oenococcus oeni PSU-1]
 gi|290890873|ref|ZP_06553938.1| hypothetical protein AWRIB429_1328 [Oenococcus oeni AWRIB429]
 gi|116092044|gb|ABJ57198.1| CBS domain containing protein [Oenococcus oeni PSU-1]
 gi|290479452|gb|EFD88111.1| hypothetical protein AWRIB429_1328 [Oenococcus oeni AWRIB429]
          Length = 209

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +K    L  A+  L  K  G + VV+E   L G+I+  D+ R    + ++ ++    +M 
Sbjct: 87  IKASDTLQVAVGKLFLKDVGSLYVVNEKGDLVGLISRKDLLRASLNNSNVQSMMASIIMT 146

Query: 291 KNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVH 331
           + P       D  +  A +LL  H +  L VV+    + AIG + 
Sbjct: 147 RMPNIITATPDMSVIEAGKLLLLHKVDSLPVVEKQSSRHAIGKIT 191


>gi|313616557|gb|EFR89409.1| inosine-5'-monophosphate dehydrogenase [Listeria innocua FSL
           S4-378]
          Length = 192

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/164 (23%), Positives = 61/164 (37%), Gaps = 15/164 (9%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L  E         P  SA M       +AIA+            V+H    +      
Sbjct: 30  VDLSVEMAPSLKLNVPIWSAGMDTITEAKMAIAIARQGGIG-----VVHKNMSIEQQAEE 84

Query: 220 ASDVMHSGDSIPLVK----IGCPLIDAITILSEKRFGCVAVVDEGQ--KLKGIITEGDIF 273
              V  S   + +          +  A  ++ + R   V +V+  +  KL GI+T  D+ 
Sbjct: 85  IEKVKRSESGVIIDPFYLTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLR 144

Query: 274 RNFHKDLNTLSVEDVMIK-NPKVILEDTLLTVAMQLLRQHNISV 316
             F  D +T+ ++DVM K N       T L  A Q+L++H I  
Sbjct: 145 --FISDYSTV-IKDVMTKENLVTAPVGTTLKQAEQILQKHRIEK 185



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 18/102 (17%), Positives = 44/102 (43%), Gaps = 13/102 (12%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED-VMIKNPKV 295
             + +A   ++  R G + VV +   +              +++  +   +  +I +P  
Sbjct: 52  DTITEAKMAIAIARQGGIGVVHKNMSI----------EQQAEEIEKVKRSESGVIIDPFY 101

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDCQ--KAIGIVHFLDL 335
           +  D  +  A  L+ ++ IS + +V++ +  K +GI+   DL
Sbjct: 102 LTPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDL 143


>gi|94501190|ref|ZP_01307712.1| hypothetical protein RED65_07939 [Oceanobacter sp. RED65]
 gi|94426617|gb|EAT11603.1| hypothetical protein RED65_07939 [Oceanobacter sp. RED65]
          Length = 193

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 12/117 (10%)

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR---NFHKDL 280
           + S   + L +    L DA   L E++   + +  +  KL GI T   I R    +  + 
Sbjct: 74  IMSQPVVYLNQETLDLDDAEQTLRERKISHLPIC-QNGKLVGITTNIQILRYRLKYETNW 132

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
               V             DT +     ++   +I  L +VD+ Q  +G++   DLLR
Sbjct: 133 YHTKV--------FAAKPDTDIHQCAHVMFDEHIGCLPIVDNQQNLVGLITRSDLLR 181


>gi|23094403|emb|CAD28139.1| putative 6-phospho-3-hexuloisomerase [Rhodococcus opacus]
          Length = 193

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/187 (22%), Positives = 69/187 (36%), Gaps = 17/187 (9%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A R ++ E   L      L       +  A   I + +  V + G G+SG      A  L
Sbjct: 15  ARRIVLEENHRL------LNSLADEHWDRAGSLITSARA-VFVIGNGRSGLAVQMAAMRL 67

Query: 87  ASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITS 146
              G          A       +   D++I +S SG++  +      A +    ++A+T+
Sbjct: 68  MHLGLRVHVAGEVTAP-----ALGAGDVLIAVSGSGTTASVVGAADTATKVGASVLAVTT 122

Query: 147 ENKSVVACHADIVLTLP---KEPESCPHGLAPTTSAIMQLAIG--DALAIALLESRNFSE 201
            + S +A  AD VL LP   K+  S         S   Q  +   DAL  AL  + + + 
Sbjct: 123 ASDSPLAQRADDVLVLPAADKQDHSAAITRQYAGSLFEQSVLLAFDALFQALWSNEDQTA 182

Query: 202 NDFYVLH 208
              +  H
Sbjct: 183 ERLWERH 189


>gi|58119404|gb|AAW65379.1| mycophenolic acid-resistant inosine-5'-monophosphate dehydrogenase
           [Candida albicans]
 gi|156254841|gb|ABU62833.1| mycophenolic acid resistance protein [Expression vector pPZ3TA]
          Length = 521

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            +P  S+ M     + +AI  ALL       ++         +  +    +  +   +  
Sbjct: 67  KSPFVSSPMDTVTEENMAIHMALLGGIGIIHHNCTSEEQAEMVRKVKKYENGFI---NDP 123

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +   +     F    V + G    KL GIIT  DI   FH+D N   V +
Sbjct: 124 VVISPEVTVGEVKKMGEVLGFTSFPVTENGKVGGKLVGIITSRDI--QFHED-NKSPVSE 180

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K+  V  +   LT   +LLR      L +VD     + ++   DL +
Sbjct: 181 VMTKDLVVGKKGISLTDGNELLRSSKKGKLPIVDAEGNLVSLISRTDLQK 230


>gi|296328664|ref|ZP_06871181.1| CBS domain protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
 gi|296154263|gb|EFG95064.1| CBS domain protein [Fusobacterium nucleatum subsp. nucleatum ATCC
           23726]
          Length = 207

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 14/157 (8%)

Query: 183 LAIGDALAIALLESRNFSENDFYVL--------HPGGKLGTLFVCASDVMHSGDSIPLVK 234
           L  GD +A  L  +++    DF +L                       V         + 
Sbjct: 28  LLSGDEIAQNLNVTKSALRTDFSILTRLKLITAKQNKGYIYNKCTIKRVRDCMSPQNSIS 87

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
           +   + DAI  L     G + VV E +KL GII+  D+ +     K++  + V  +M + 
Sbjct: 88  VKTSVYDAIIHLFNFDLGTLIVV-ENEKLVGIISRKDLLKAALNGKNIERIPVSMIMTRM 146

Query: 293 PKVIL--EDTLLTVAMQLLRQHNISVLMVV-DDCQKA 326
           P ++   ED  +  A++ L +H I  L V+  +  K 
Sbjct: 147 PNIVHCFEDDNIMEAIEKLIKHEIDSLPVLRKEKGKL 183


>gi|284039313|ref|YP_003389243.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Spirosoma linguale DSM 74]
 gi|283818606|gb|ADB40444.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Spirosoma linguale DSM 74]
          Length = 612

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 9/141 (6%)

Query: 61  KAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
            A   R+VI G G S H   +   +   LA    P    +A+E       +I   D++I 
Sbjct: 293 LAKSKRIVIIGCGTSWHAGLVAEYIFEELAR--IPVEVEYASE-FRYRNPIIKEGDIVIA 349

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG + +  A +  A+     +  + +   S +A            PE    G+A T 
Sbjct: 350 ISQSGETADTLAAIELAKSKGATIFGVCNVVGSSIARATHAGAFTHAGPE---IGVASTK 406

Query: 178 SAIMQLAIGDALAIALLESRN 198
           +   Q+ +   +A+A    + 
Sbjct: 407 AFTAQVTVLTLMALAAAHRKG 427


>gi|170682954|ref|YP_001746809.1| RpiR family transcriptional regulator [Escherichia coli SMS-3-5]
 gi|331681339|ref|ZP_08381976.1| transcriptional regulator, RpiR family [Escherichia coli H299]
 gi|170520672|gb|ACB18850.1| transcriptional regulator, RpiR family [Escherichia coli SMS-3-5]
 gi|323965478|gb|EGB60933.1| SIS domain-containing protein [Escherichia coli M863]
 gi|327250286|gb|EGE62005.1| helix-turn-helix domain, rpiR family protein [Escherichia coli
           STEC_7v]
 gi|331081560|gb|EGI52721.1| transcriptional regulator, RpiR family [Escherichia coli H299]
          Length = 287

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 3/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE+  +         AV  +   +  + +   G S     ++   L   G P    +
Sbjct: 102 ISVLETHRRSLDMNAISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQN 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A         +   D++IVLS  G + E+      AR++   +IAIT   ++ +A   D
Sbjct: 162 DALMMRMMCSAVMPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAITP-AQTPLAEQVD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L  +         P  S    LA+ D LA  L  +      D
Sbjct: 221 LVLPLLVQESDYIFKPTP--SRYAMLAMVDVLATELAMANKAQAKD 264


>gi|148270710|ref|YP_001245170.1| response regulator receiver protein [Thermotoga petrophila RKU-1]
 gi|147736254|gb|ABQ47594.1| response regulator receiver protein [Thermotoga petrophila RKU-1]
          Length = 446

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/107 (21%), Positives = 52/107 (48%), Gaps = 9/107 (8%)

Query: 235 IGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVM 289
               + +A+  +  +         + V+D  +KLKG +   ++      D     V ++M
Sbjct: 144 EDMTVREALEKVRREGKKKENIYSLMVIDRTRKLKGTV---ELRDMIVAD-PDQKVSEIM 199

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            K+P  +       +A +L++++++ +L VVD  ++ IG++ F DL+
Sbjct: 200 NKDPVFVHATDDQELAAELMKKYDLIILPVVDSEERLIGVITFDDLV 246


>gi|75906870|ref|YP_321166.1| multi-sensor signal transduction histidine kinase [Anabaena
           variabilis ATCC 29413]
 gi|75700595|gb|ABA20271.1| multi-sensor signal transduction histidine kinase [Anabaena
           variabilis ATCC 29413]
          Length = 1741

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 6/103 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLNTLSVEDVMI 290
           V+   PL DA++ ++++  G   VV    ++ G ++E D+ +      DL T ++  VM 
Sbjct: 24  VEPEMPLSDAVSQMAKQ--GAAIVVVANTQILGWLSERDVVKLVALGVDLQTTTISQVMN 81

Query: 291 KNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +     + +   +   + LLRQH  S L+VVD+ ++ +G + 
Sbjct: 82  TSIIFFQVAQFEDIGAIISLLRQHQSSCLLVVDEQEQLMGTIT 124


>gi|289550665|ref|YP_003471569.1| CBS domain protein [Staphylococcus lugdunensis HKU09-01]
 gi|315658160|ref|ZP_07911032.1| CBS domain protein [Staphylococcus lugdunensis M23590]
 gi|289180197|gb|ADC87442.1| CBS domain protein [Staphylococcus lugdunensis HKU09-01]
 gi|315496489|gb|EFU84812.1| CBS domain protein [Staphylococcus lugdunensis M23590]
          Length = 163

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/120 (20%), Positives = 47/120 (39%), Gaps = 8/120 (6%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLS 284
                +VK    + DAI  +  +    + +V+      GI +  D+ R     +D++T+ 
Sbjct: 37  MSHPVVVKGDMTVYDAICTIFLEDASTLFIVNNNNDFIGICSRKDLLRASMIGEDIHTMP 96

Query: 285 VEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVV--DDCQK--AIGIVHFLDLLRF 338
           +   M + P    + E  L+  A   + +  I  L VV   D  K   +G +    + + 
Sbjct: 97  ISINMTRMPNVTYLEESELVVYAANQMIEKEIDALPVVRKKDNNKYEVVGRISKTTITKL 156



 Score = 40.3 bits (93), Expect = 0.50,   Method: Composition-based stats.
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 3/69 (4%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHF 332
           + F   L   +V+D M  +P V+  D  +  A+  +  +   S L +V++    IGI   
Sbjct: 22  KIFKDQLRQYNVKDYMS-HPVVVKGDMTVYDAICTIFLEDA-STLFIVNNNNDFIGICSR 79

Query: 333 LDLLRFGII 341
            DLLR  +I
Sbjct: 80  KDLLRASMI 88


>gi|269121040|ref|YP_003309217.1| RpiR family transcriptional regulator [Sebaldella termitidis ATCC
           33386]
 gi|268614918|gb|ACZ09286.1| transcriptional regulator, RpiR family [Sebaldella termitidis ATCC
           33386]
          Length = 282

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 45/121 (37%), Gaps = 1/121 (0%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+ +L    +      +  I   K  +   GIG S              G          
Sbjct: 113 LKDTLSLINNEILDKCINLINNAK-HIEFIGIGHSNLTAQDAKYKFLRIGKSVASHSDPH 171

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                  +  R+D+II +S +G + E+   L  A+      IAIT+ +K+ +  +AD VL
Sbjct: 172 LFKMAASISDREDVIIGISQTGETREVIDSLQSAKVRGAKTIAITNNDKTEITKYADYVL 231

Query: 161 T 161
            
Sbjct: 232 L 232


>gi|148652366|ref|YP_001279459.1| signal-transduction protein [Psychrobacter sp. PRwf-1]
 gi|148571450|gb|ABQ93509.1| putative signal-transduction protein with CBS domains
           [Psychrobacter sp. PRwf-1]
          Length = 681

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 49/122 (40%), Gaps = 12/122 (9%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAV----------VDEGQKLKGIITEGDIFRNF 276
              +  +     L+DA T +++     V V              Q   GI+T+ DI R  
Sbjct: 216 MLDVHTIAETATLVDAATTMTQAGLKHVLVKRIPTVERHPTRSHQSNLGILTDADICRAV 275

Query: 277 HKDLNTLSV--EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            + ++  +    D        I     ++ A+  + ++ +  L V+D+ Q+ IG++   D
Sbjct: 276 SERVDMSTALCRDYAKFKLHTIDHHQDISEALLAMIRYRVHRLPVLDENQEVIGVLGQSD 335

Query: 335 LL 336
           LL
Sbjct: 336 LL 337


>gi|2497357|sp|O00086|IMDH3_CANAL RecName: Full=Probable inosine-5'-monophosphate dehydrogenase;
           Short=IMP dehydrogenase; Short=IMPD; Short=IMPDH
 gi|1930016|gb|AAB51509.1| putative inosine-5'-monophosphate dehydrogenase [Candida albicans]
          Length = 521

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/170 (22%), Positives = 65/170 (38%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
            +P  S+ M     + +AI  ALL       ++         +  +    +  +   +  
Sbjct: 67  KSPFVSSPMDTVTEENMAIHMALLGGIGIIHHNCTSEEQAEMVRKVKKYENGFI---NDP 123

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
            ++     + +   +     F    V + G    KL GIIT  DI   FH+D N   V +
Sbjct: 124 VVISPEVTVGEVKKMGEVLGFTSFPVTENGKVGGKLVGIITSRDI--QFHED-NKSPVSE 180

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           VM K+  V  +   LT   +LLR      L +VD     + ++   DL +
Sbjct: 181 VMTKDLVVGKKGISLTDGNELLRSSKKGKLPIVDAEGNLVSLISRTDLQK 230


>gi|269124966|ref|YP_003298336.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
 gi|268309924|gb|ACY96298.1| putative signal transduction protein with CBS domains
           [Thermomonospora curvata DSM 43183]
          Length = 124

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/106 (22%), Positives = 45/106 (42%), Gaps = 4/106 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVMI 290
            + G  L DA   ++E++ G + ++D G ++ GIITE D+        D +   V     
Sbjct: 14  CRPGERLADAARRMAEEKVGALPLLD-GDRVIGIITERDLVTAMADAVDPDATDVASYAT 72

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              +    +       + + +  I  L V  +  + +G+V   DLL
Sbjct: 73  DTVQTADVNEDSQQVARRMLEAGIRHLPV-REGGRMVGMVSMRDLL 117



 Score = 40.3 bits (93), Expect = 0.42,   Method: Composition-based stats.
 Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 3/49 (6%)

Query: 292 NPKVI--LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            P VI       L  A + + +  +  L ++D   + IGI+   DL+  
Sbjct: 8   RPTVIGCRPGERLADAARRMAEEKVGALPLLDGD-RVIGIITERDLVTA 55


>gi|306832085|ref|ZP_07465239.1| RpiR family transcriptional regulator [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
 gi|304425524|gb|EFM28642.1| RpiR family transcriptional regulator [Streptococcus gallolyticus
           subsp. gallolyticus TX20005]
          Length = 315

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/188 (15%), Positives = 80/188 (42%), Gaps = 7/188 (3%)

Query: 42  ESSLQGEL----SFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           E ++   L        + AV  ++  K  + +   G S +I       +   G      +
Sbjct: 131 EDTVNDTLFILDQRMLNRAVTILRMSKT-IHVFSYGTSLNIAESFREKMLKIGRNVQITN 189

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                  +   + + D+ I++S+SG ++++  I    ++ ++P+I ++S  ++ ++ ++ 
Sbjct: 190 NLNYQIYEASCLEKGDVAILISYSGETEKMLQIAELCQQVNVPMILLSSLGENSLSSYSS 249

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLF 217
             LT+    ES    +   ++ +  + + DAL  A    ++F ++    +    KL  + 
Sbjct: 250 CKLTIS-SKESLVQNIGDFSTHLSVMFLLDALYSAYF-LKDFDQHYDTKIKKAKKLEHIR 307

Query: 218 VCASDVMH 225
             ++ ++ 
Sbjct: 308 SSSNRMIQ 315


>gi|290511315|ref|ZP_06550684.1| RpiR family Phosphosugar-binding transcriptional regulator
           [Klebsiella sp. 1_1_55]
 gi|289776308|gb|EFD84307.1| RpiR family Phosphosugar-binding transcriptional regulator
           [Klebsiella sp. 1_1_55]
          Length = 251

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 103 NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 161

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 162 DM---ARNALAIVLSVSGETEEILRFASQFSLHRCKVMSITSHEHSRLAKLADFNLSWHV 218

Query: 165 EPE 167
              
Sbjct: 219 PQT 221


>gi|288933619|ref|YP_003437678.1| RpiR family transcriptional regulator [Klebsiella variicola At-22]
 gi|288888348|gb|ADC56666.1| transcriptional regulator, RpiR family [Klebsiella variicola At-22]
          Length = 242

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHRCKVMSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|298528201|ref|ZP_07015605.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
 gi|298511853|gb|EFI35755.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Desulfonatronospira
           thiodismutans ASO3-1]
          Length = 620

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 4/114 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLN--T 282
           S  +   V++   +  A  I+ ++      V  E  K  GI+T+ DI +    +DL+  +
Sbjct: 156 SVKAPVTVQMDTSVSLAARIMLQEGTTACLVRQE-GKFLGIVTQQDILKKVVARDLDPGS 214

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++VE VM      +    LL  A   +    I  L+V D      GI+   DLL
Sbjct: 215 ITVEGVMSSPLITVASHELLFQAFSRMVSRGIHRLVVQDSGTDPRGIIEERDLL 268



 Score = 39.9 bits (92), Expect = 0.65,   Method: Composition-based stats.
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+++DV +K P  +  DT +++A +++ Q   +  +V     K +GIV   D+L+ 
Sbjct: 150 LTLQDVSVKAPVTVQMDTSVSLAARIMLQEGTTACLV-RQEGKFLGIVTQQDILKK 204


>gi|206579585|ref|YP_002236642.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
 gi|206568643|gb|ACI10419.1| transcriptional regulator, RpiR family [Klebsiella pneumoniae 342]
          Length = 244

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 96  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 154

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 155 DM---ARNALAIVLSVSGETEEILRFASQFSLHRCKVMSITSHEHSRLAKLADFNLSWHV 211

Query: 165 EPE 167
              
Sbjct: 212 PQT 214


>gi|163752035|ref|ZP_02159244.1| transcriptional regulator, RpiR family protein [Shewanella benthica
           KT99]
 gi|161328087|gb|EDP99256.1| transcriptional regulator, RpiR family protein [Shewanella benthica
           KT99]
          Length = 284

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 61/162 (37%), Gaps = 4/162 (2%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++SL+++ Q       + AV+ +   K ++   G+G S  +     +       P    
Sbjct: 102 SMASLDTARQSIDICAINKAVDILTQAK-KISFFGLGASASVAHDAQNKFFRFNVPVICF 160

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
                           D+ +++S +G +  +  I   AR     +I IT+   S ++   
Sbjct: 161 DDVLMQRMSCINSGEGDVFVLISHTGRTKSMIDIARLARENGAAVIGITT-QHSPLSNEC 219

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            + LT+    ++  +   P  S + QL + D LA      R 
Sbjct: 220 TLPLTMEVPEDTDMY--LPMASRLAQLVLIDVLATGFTLRRG 259


>gi|148642544|ref|YP_001273057.1| inosine-5'-monophosphate dehydrogenase related protein
           [Methanobrevibacter smithii ATCC 35061]
 gi|261349500|ref|ZP_05974917.1| inosine-5-monophosphate dehydrogenase related protein IX
           [Methanobrevibacter smithii DSM 2374]
 gi|148551561|gb|ABQ86689.1| inosine-5'-monophosphate dehydrogenase related protein
           [Methanobrevibacter smithii ATCC 35061]
 gi|288861864|gb|EFC94162.1| inosine-5-monophosphate dehydrogenase related protein IX
           [Methanobrevibacter smithii DSM 2374]
          Length = 279

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 242 AITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
            + ++ ++    + VV  + ++L G+IT  D+      + +   +  +M  +      D 
Sbjct: 23  VLDLMRKEDKAVLPVVKGDTKQLVGLITRSDLI----VNPDEEQIAILMSTDLVTASPDD 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +    + +  +N+  + VVDD    +GI+   DL+
Sbjct: 79  DVKDVAKKMIDNNVRRVPVVDDNGDLVGIITSFDLV 114



 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 1/106 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIKN 292
                + D    + +     V VVD+   L GIIT  D+      K  +   VE+ MI  
Sbjct: 75  SPDDDVKDVAKKMIDNNVRRVPVVDDNGDLVGIITSFDLVSNALIKLESDDPVENFMITT 134

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  T L VA + ++Q  +  ++ ++D  K +GI+   D +  
Sbjct: 135 VPTTWYKTPLNVAFETMKQFGLKSVLALNDSAKLVGILTETDFIEE 180



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 33/135 (24%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------------- 275
            PL  A   + +     V  +++  KL GI+TE D                         
Sbjct: 142 TPLNVAFETMKQFGLKSVLALNDSAKLVGILTETDFIEESEIISERSEHSSTVGTEGDKW 201

Query: 276 ---------FHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                      K+    +   VEDV     +V+   T  +   + ++  NI  + V+   
Sbjct: 202 SWDSTSVLYIEKNCLKFTDKLVEDVGTHKVEVVNSKTKASDCAKKMKTLNIEQIPVIGVE 261

Query: 324 QKAIGIVHFLDLLRF 338
            + IG+V   DL++ 
Sbjct: 262 GELIGLVRASDLIKA 276


>gi|153006663|ref|YP_001380988.1| CBS domain-containing protein [Anaeromyxobacter sp. Fw109-5]
 gi|152030236|gb|ABS28004.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Anaeromyxobacter sp. Fw109-5]
          Length = 598

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/112 (23%), Positives = 42/112 (37%), Gaps = 6/112 (5%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSV 285
                V+    +  A  ++ E R   V V  +     GI+T+ D       D       V
Sbjct: 157 RPAVWVERDATVAHAARVMREHRISSVLVRTD---PPGIVTDRDFRNRVLADGLPPATPV 213

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +V  +  +++  +  L  A   L    I  L VV D  +  G++   DLLR
Sbjct: 214 TEVFTRPLQLVPSEAPLHAAWTALLDARIHHLPVVTD-GEIAGVITSGDLLR 264


>gi|330878000|gb|EGH12149.1| helix-turn-helix protein RpiR:sugar isomerase (SIS) [Pseudomonas
           syringae pv. morsprunorum str. M302280PT]
          Length = 286

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/166 (23%), Positives = 61/166 (36%), Gaps = 8/166 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G  + +F  AV  +      +   G+G  S     +L + L   G P     
Sbjct: 102 ATLRQHLAGFDASRFTAAVACVADAS-MIHTFGMGGCSSLCSEELQTRLVRLGYPVAACR 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +IV S SG + EL   +  AR +   ++AIT    S +   A+
Sbjct: 161 DPVMMRMIAATLGPQHSLIVCSLSGRTPELLDAVALARSYGARVLAIT-LPDSPLEQLAE 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L     +  +   PT +    L   D LA  L      S  D
Sbjct: 220 VVLPLQIAETNFIYK--PTAARYGMLLTIDVLATELAL---LSPED 260


>gi|170695882|ref|ZP_02887022.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
 gi|170139180|gb|EDT07368.1| transcriptional regulator, RpiR family [Burkholderia graminis
           C4D1M]
          Length = 332

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 68/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 156 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 211

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++  + E +  L  A     
Sbjct: 212 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYAKETQYCLRVAHHHQA 265

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 266 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 318

Query: 199 FSEND 203
            +  +
Sbjct: 319 LNVEE 323


>gi|307353967|ref|YP_003895018.1| CBS domain-containing protein [Methanoplanus petrolearius DSM
           11571]
 gi|307157200|gb|ADN36580.1| CBS domain containing protein [Methanoplanus petrolearius DSM
           11571]
          Length = 261

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/113 (21%), Positives = 47/113 (41%), Gaps = 5/113 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLS 284
           +    +  + +     D I  +         VVD  +K+ G I   D+   +     T  
Sbjct: 9   YMTYDVVTIDVNGTAKDVIETIKVTHHDGFPVVD-NKKVVGYIAARDLLFVY----PTSP 63

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           V+ +M ++  V   D  +  A +++ +  I  L VVD+    +GI+   D++R
Sbjct: 64  VDRIMSRHLIVADPDMSINDAARVIFRSGIQKLPVVDEDGNLMGIISNADVIR 116



 Score = 39.9 bits (92), Expect = 0.63,   Method: Composition-based stats.
 Identities = 12/58 (20%), Positives = 22/58 (37%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
           +  +         + +      + DA  ++       + VVDE   L GII+  D+ R
Sbjct: 59  YPTSPVDRIMSRHLIVADPDMSINDAARVIFRSGIQKLPVVDEDGNLMGIISNADVIR 116


>gi|219853221|ref|YP_002467653.1| signal transduction protein with CBS domains [Methanosphaerula
           palustris E1-9c]
 gi|219547480|gb|ACL17930.1| putative signal transduction protein with CBS domains
           [Methanosphaerula palustris E1-9c]
          Length = 252

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 9/109 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRNFHKDLNTLSVED 287
           +   PL    T++ E  +    V+ +   L G+I+  D+       R+  +  N + VE+
Sbjct: 136 EANDPLQRVHTLIIESGYTAFPVL-KKHLLIGMISRRDLLDAGHFRRSLMQSGNAM-VEE 193

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M      I  +  +  A +LL +H+IS L V ++  K +GI+   D+L
Sbjct: 194 LMTTPVISISPEQEIRTAAELLIKHDISRLPV-EEDGKVVGILDRHDVL 241



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 26/110 (23%), Positives = 38/110 (34%), Gaps = 2/110 (1%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTLSVEDVM 289
            +V     L      + + R    AVVD   KL G I   D+F     +      V D M
Sbjct: 69  AMVTPEDTLEKVAATVIQSRTDSTAVVDSNGKLIGGILVSDLFPIVLSRHEPKGKVADCM 128

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            K       +  L     L+ +   +   V+      IG++   DLL  G
Sbjct: 129 SKKVVTAEANDPLQRVHTLIIESGYTAFPVL-KKHLLIGMISRRDLLDAG 177


>gi|149183344|ref|ZP_01861782.1| YqzB [Bacillus sp. SG-1]
 gi|148848941|gb|EDL63153.1| YqzB [Bacillus sp. SG-1]
          Length = 209

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 4/122 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L T  +    V +      +V     + DAI  +  +  G + V+DE   L
Sbjct: 58  FYSGKTGTQLLTDNLKKILVRNYQSIPVVVNENVSVYDAIVTMFLEDVGTLFVIDENTHL 117

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L ++ V  +M + P      +D LL    + L +  I  + V
Sbjct: 118 VGVLSRKDLLRASIGKQELTSIPVNIIMTRMPNITTCEKDDLLIDVAKSLIEKQIDAVPV 177

Query: 320 VD 321
           V+
Sbjct: 178 VN 179



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 25/48 (52%)

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           P V+ E+  +  A+  +   ++  L V+D+    +G++   DLLR  I
Sbjct: 84  PVVVNENVSVYDAIVTMFLEDVGTLFVIDENTHLVGVLSRKDLLRASI 131


>gi|91777789|ref|YP_552997.1| CBS domain-containing protein [Burkholderia xenovorans LB400]
 gi|91690449|gb|ABE33647.1| CBS domain protein [Burkholderia xenovorans LB400]
          Length = 150

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 7/120 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE--GQKL--KGIITEGDIFRNF---HK 278
               +    +   +++A  I+ ++  G +  V++    KL  +G++T+ DI         
Sbjct: 7   CTRDVVTCGLNATILEACKIMRDRHVGDIVAVEKSADGKLHPRGLLTDRDIVLAVLAREV 66

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           D   L V DVM     V  E   +   ++ +R H I  + VV +  + +G++ F DLL  
Sbjct: 67  DAFGLFVADVMSSPLIVAYEGEDVWQVVKRMRLHAIRRMPVVGNAGELVGLLSFDDLLDA 126


>gi|313665639|ref|YP_004047510.1| magnesium transporter [Mycoplasma leachii PG50]
 gi|312949841|gb|ADR24437.1| magnesium transporter [Mycoplasma leachii PG50]
          Length = 467

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 9/109 (8%)

Query: 233 VKIGCPLIDAITILSEKR-----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
           VK    +   I  + +          V VV++  +L G I   D+      D+NT  +ED
Sbjct: 144 VKQTTTVSKTIKEIQKNHDDYDEIDDVFVVNKLNQLVGSIEVKDL---ILNDMNT-KIED 199

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +M      I  +     A   L++++IS L VVD+    +GI+   D++
Sbjct: 200 IMNTKVISINSNQSQEDASNALKKYDISTLAVVDNNNVLVGIITSDDII 248


>gi|302038526|ref|YP_003798848.1| hypothetical protein NIDE3231 [Candidatus Nitrospira defluvii]
 gi|300606590|emb|CBK42923.1| protein of unknown function, contains CBS domain pair [Candidatus
           Nitrospira defluvii]
          Length = 141

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/104 (26%), Positives = 52/104 (50%), Gaps = 4/104 (3%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVI 296
           +   I +LS    G   V+D   +  G I+E DI +     +DLN+L+  ++M  +P  +
Sbjct: 32  MTITIELLSAHVSGG-PVLDAEGRYVGFISEFDILKALEAGQDLNSLTATELMAGHPIAV 90

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            + T +  A++L+  +++  L V ++  +    V   DLLR  I
Sbjct: 91  GKSTPIPEAIKLMVDNHLLNLPV-EENGEVTYSVTRHDLLRASI 133


>gi|167755275|ref|ZP_02427402.1| hypothetical protein CLORAM_00780 [Clostridium ramosum DSM 1402]
 gi|167705325|gb|EDS19904.1| hypothetical protein CLORAM_00780 [Clostridium ramosum DSM 1402]
          Length = 297

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 6/147 (4%)

Query: 29  RSIIAEKRGLSSLE-SSLQGELS----FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
            SI+     ++ L+  SL   LS         AV  ++     V + G+        +  
Sbjct: 92  DSIMNIANKITQLKTESLNDTLSLIHHDTLQKAVRALQKSNT-VKVFGVSNLSFPAEEFV 150

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             L   G  +         + +  M   +DL I LS+SG S E+  I    ++ ++P+IA
Sbjct: 151 FKLRHIGKNAEVFVLNSNIYQEAMMANSNDLGICLSYSGESGEIIKIANILKKKNVPIIA 210

Query: 144 ITSENKSVVACHADIVLTLPKEPESCP 170
           ITS  ++ +   ADIVL +    +S  
Sbjct: 211 ITSIGENSLTRLADIVLRVTTREKSYS 237


>gi|158338757|ref|YP_001519934.1| two-component hybrid sensor and regulator [Acaryochloris marina
           MBIC11017]
 gi|158308998|gb|ABW30615.1| two-component hybrid sensor and regulator, putative [Acaryochloris
           marina MBIC11017]
          Length = 834

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/232 (18%), Positives = 82/232 (35%), Gaps = 22/232 (9%)

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
           +S + +EL          S+PL  +                     P   P   AP +S 
Sbjct: 9   YSPNVEELIDSEPLMVPPSMPLRNVVDYMSHAEGRSCAQQ----SPPRETPFETAPQSSC 64

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPL 239
            + +     L I       F+E D   L  GG+       A  +     ++P V     +
Sbjct: 65  ALIVQEQQLLGI-------FTERDLVRLTAGGQSIEGVFIADAMSVPLVTLP-VHKFRDV 116

Query: 240 IDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMIKNPKVIL 297
              + ++ +++   + V D+     G+IT   + +       L   SV  VMI     + 
Sbjct: 117 FTTLALMRQEKIRHLPVEDDQGHFVGLITTETLRKAIQPINLLGLWSVGQVMIDGVIWMR 176

Query: 298 EDTLLTVAMQLLRQHNISVLMVV--------DDCQKAIGIVHFLDLLRFGII 341
            +T L    Q + +H IS +++               +GI+   D++++ ++
Sbjct: 177 PNTPLIDIAQKMSEHAISCIVIAQPLASTQNHHAVTPLGIITERDIVQYQVL 228



 Score = 58.4 bits (140), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/117 (25%), Positives = 46/117 (39%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVD--------EGQKLKGIITEGDIFR--NFHKDLNTL 283
           +   PLID    +SE    C+ +                GIITE DI +      +L+ L
Sbjct: 176 RPNTPLIDIAQKMSEHAISCIVIAQPLASTQNHHAVTPLGIITERDIVQYQVLALNLHRL 235

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD---CQKAIGIVHFLDLLR 337
           + E VM         +  L    + +    I  L+V+ +    ++  GIV   DLLR
Sbjct: 236 TAEMVMSTPLFCAHPEDNLWAVHEQMGNRRIRRLVVISETVHGRELQGIVTQSDLLR 292


>gi|70734271|ref|YP_257911.1| transcriptional regulator [Pseudomonas fluorescens Pf-5]
 gi|68348570|gb|AAY96176.1| transcriptional regulator, putative [Pseudomonas fluorescens Pf-5]
          Length = 286

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/159 (25%), Positives = 61/159 (38%), Gaps = 5/159 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGK-SGHIGSKLASTLASTGTPSFFVH 97
           ++L   L G    QF  AV  +   +  +   G+G  S    S+L   L   G P    H
Sbjct: 102 AALHQHLAGFEEAQFADAVRLLGRAR-MIHAFGMGGCSTLCSSELQVRLVRLGYPIAACH 160

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +     +I  S +G + EL   +  AR +   ++AIT    S +A  AD
Sbjct: 161 DPVMMRVTAAALGPQHAVIACSLTGITPELLEAVALARTYGAGILAIT-LPDSPLAQLAD 219

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           ++L L     S  +   PT +    L   D LA  L  +
Sbjct: 220 VLLPLHSAETSFIYK--PTAARYGMLLAIDVLATELALA 256


>gi|308180738|ref|YP_003924866.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
 gi|308046229|gb|ADN98772.1| transcription regulator [Lactobacillus plantarum subsp. plantarum
           ST-III]
          Length = 237

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/94 (23%), Positives = 46/94 (48%), Gaps = 2/94 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V+  GIG SG +    A    + G  +F +  +        +   D ++  LS SG + E
Sbjct: 114 VIFVGIGSSGSLARYAARCFTNAGKVAFGLEDSNYPVNTFEI--HDTVVFALSESGETPE 171

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           L A++ + ++    +++IT++++S +A  +D   
Sbjct: 172 LIALVQHFQQRRCAVLSITNQSQSTLAKLSDWNF 205


>gi|284037543|ref|YP_003387473.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Spirosoma linguale DSM 74]
 gi|283816836|gb|ADB38674.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Spirosoma linguale DSM 74]
          Length = 612

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/141 (21%), Positives = 55/141 (39%), Gaps = 9/141 (6%)

Query: 61  KAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
            A   R+VI G G S H   +   +   LA    P    +A+E       +I   D++I 
Sbjct: 293 LAKSKRIVIIGCGTSWHAGLVAEYIFEELAR--IPVEVEYASE-FRYRNPIIKEGDIVIA 349

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG + +  A +  A+     +  + +   S +A            PE    G+A T 
Sbjct: 350 ISQSGETADTLAAIELAKSKGATIFGVCNVVGSSIARATHAGAFTHAGPE---IGVASTK 406

Query: 178 SAIMQLAIGDALAIALLESRN 198
           +   Q+ +   +A+A    + 
Sbjct: 407 AFTAQVTVLTLMALAAAHRKG 427


>gi|261419646|ref|YP_003253328.1| RpiR family transcriptional regulator [Geobacillus sp. Y412MC61]
 gi|319766463|ref|YP_004131964.1| RpiR family transcriptional regulator [Geobacillus sp. Y412MC52]
 gi|261376103|gb|ACX78846.1| transcriptional regulator, RpiR family [Geobacillus sp. Y412MC61]
 gi|317111329|gb|ADU93821.1| transcriptional regulator, RpiR family [Geobacillus sp. Y412MC52]
          Length = 244

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/139 (20%), Positives = 54/139 (38%), Gaps = 4/139 (2%)

Query: 32  IAEKRGLS--SLESSLQGELSFQF-HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS 88
            AE   L+  ++    +  L  +    AV K+   K  V   G+G S +    +A  L  
Sbjct: 75  RAEAAALAGGTVIEKTKELLDERLIEEAVGKLHEAK-HVFFYGVGDSAYFCEMMAKHLRC 133

Query: 89  TGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
            G  + F         +       D++ V+S SG + ++   +  A++    +I++T   
Sbjct: 134 VGKRADFFVQRHDMLYNADRCGEKDVVFVISASGETKQVLEAVAAAKQNGAFVISLTHFC 193

Query: 149 KSVVACHADIVLTLPKEPE 167
            + +A  AD  L      +
Sbjct: 194 PNSLADLADFRLYCWAPKQ 212


>gi|170738324|ref|YP_001779584.1| CBS domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|169820512|gb|ACA95094.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
          Length = 143

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D G +L  I+T+ D+  R   H      
Sbjct: 8   MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-GAELVAIVTDRDLAVRALSHGHSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V  +  +  +ED  +    Q +    +  L V+D   K +G+V   D+  R G
Sbjct: 67  PVQAVASRPVQWCVEDDGVGDVQQRMADVQLHRLPVLDRSLKLVGMVSLGDIATRAG 123



 Score = 47.2 bits (111), Expect = 0.003,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A +L+++ +I VL V D  +  + IV   DL
Sbjct: 4   VNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDGAE-LVAIVTDRDL 53


>gi|150388498|ref|YP_001318547.1| sigma-54 dependent trancsriptional regulator [Alkaliphilus
           metalliredigens QYMF]
 gi|149948360|gb|ABR46888.1| sigma54 specific transcriptional regulator, Fis family
           [Alkaliphilus metalliredigens QYMF]
          Length = 587

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/110 (25%), Positives = 49/110 (44%), Gaps = 12/110 (10%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR--NFHKDLN----TLSVE 286
           +      ++AI  + E     + + ++ +K+ G++T  DI R   F +DL     +  V+
Sbjct: 22  IHHRSSRMEAIRKMLEHNVEEIIIYNDEEKVVGVLTFKDIMRPVKFERDLEIQLESHEVQ 81

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +V       I E      A  L+R+  I  L V  + +  IGIV   D+L
Sbjct: 82  EV-----LDISEGAKAIEARNLMRREKIGRLPVTKNDE-VIGIVRTKDIL 125



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 34/58 (58%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L+  +V D+M  +   I   +    A++ + +HN+  +++ +D +K +G++ F D++R
Sbjct: 6   LDNYTVRDIMSTDVLKIHHRSSRMEAIRKMLEHNVEEIIIYNDEEKVVGVLTFKDIMR 63


>gi|262045016|ref|ZP_06018058.1| RpiR family transcriptional regulator [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
 gi|259037743|gb|EEW38972.1| RpiR family transcriptional regulator [Klebsiella pneumoniae subsp.
           rhinoscleromatis ATCC 13884]
          Length = 287

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/159 (23%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE++ +         AV  +   +  + +   G S     ++   L   G P     
Sbjct: 102 ISVLETNRRALDIEALKRAVSWLSDARQILALGMGGGSTICAQEIQYRLFRLGLPVVSQS 161

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +T  D++IVLS  G + E+        ++   +IAIT    + +A  AD
Sbjct: 162 DGLLVRMMSSAVTPQDVVIVLSLGGYTREIIESAAITSQYGAKVIAITP-AGTPLAEQAD 220

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +VL L            P+TS    LA+ D LA  L  +
Sbjct: 221 LVLPLLVRENDYIFK--PSTSRYAMLAMVDVLATELAMA 257


>gi|268590954|ref|ZP_06125175.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
 gi|291313755|gb|EFE54208.1| transcriptional regulator, RpiR family [Providencia rettgeri DSM
           1131]
          Length = 283

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/144 (28%), Positives = 59/144 (40%), Gaps = 3/144 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
             F  A E I   K ++VI G G SG +  +    L                   +  + 
Sbjct: 117 NAFKLANELISKSK-KIVIYGAGSSGLVAKEFEYQLIKIKKDVNCHLDYSIQFSIVNTLD 175

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
           ++DL+IV+S SG + E   +L  AR   +P IAIT   +S V+  A+ VL          
Sbjct: 176 QNDLVIVISHSGENHECIKLLTLARELKVPTIAITKMGQSSVSSLAETVLHT--ISTEHV 233

Query: 171 HGLAPTTSAIMQLAIGDALAIALL 194
             L P  S I QL + + L   L 
Sbjct: 234 SRLIPIRSKISQLTVINMLITNLF 257


>gi|261408311|ref|YP_003244552.1| glycine betaine/L-proline ABC transporter ATPase subunit
           [Paenibacillus sp. Y412MC10]
 gi|329922931|ref|ZP_08278447.1| choline ABC transporter, ATP-binding protein OpuBA [Paenibacillus
           sp. HGF5]
 gi|261284774|gb|ACX66745.1| glycine betaine/L-proline ABC transporter, ATPase subunit
           [Paenibacillus sp. Y412MC10]
 gi|328941704|gb|EGG37989.1| choline ABC transporter, ATP-binding protein OpuBA [Paenibacillus
           sp. HGF5]
          Length = 387

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/94 (25%), Positives = 48/94 (51%), Gaps = 4/94 (4%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-DLNTLSVEDVMIKNPKVIL 297
           L +AI ++  KR   + +VD  ++L+G ++   I+R   +      +V DVM      + 
Sbjct: 272 LAEAIKMMEMKRVDSLLIVDRNRQLQGAVS---IYRVLDQYGEEGKTVADVMHPVRFSVA 328

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
             + L  A++++  H +S L VVD   + +G++ 
Sbjct: 329 SGSTLPQAIEIMDSHQLSNLPVVDSNNRFLGLIT 362



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 13/48 (27%), Positives = 24/48 (50%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           V++VMI NP        L  A++++    +  L++VD  ++  G V  
Sbjct: 255 VDEVMITNPVTAFPSRGLAEAIKMMEMKRVDSLLIVDRNRQLQGAVSI 302



 Score = 41.0 bits (95), Expect = 0.28,   Method: Composition-based stats.
 Identities = 18/65 (27%), Positives = 28/65 (43%), Gaps = 2/65 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
           G      +DVMH       V  G  L  AI I+   +   + VVD   +  G+IT G + 
Sbjct: 310 GEEGKTVADVMHPVRFS--VASGSTLPQAIEIMDSHQLSNLPVVDSNNRFLGLITRGSVV 367

Query: 274 RNFHK 278
           ++  +
Sbjct: 368 KHLAE 372


>gi|118602475|ref|YP_903690.1| inosine-5'-monophosphate dehydrogenase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
 gi|118567414|gb|ABL02219.1| inosine-5'-monophosphate dehydrogenase [Candidatus Ruthia magnifica
           str. Cm (Calyptogena magnifica)]
          Length = 486

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/169 (18%), Positives = 66/169 (39%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI + +         +  V     ++  +    S ++      
Sbjct: 40  NIPILSAAMDTVTESKLAITIAQEGGIGIIHKNMSVAEQANEVRRVKRFESGIIR---EP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D + +  +     + V+ EG  + G++T  D+   F   L  L VE+VM 
Sbjct: 97  ITISPKKTISDVLKMQQQHNISALPVL-EGNIIVGLVTSRDVR--FETRLGEL-VENVMT 152

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              K   + E T ++    LL+++ I  +++ D      G+++  D+ +
Sbjct: 153 PQNKLITVQEGTGMSEVRSLLQKYRIERVVITDHAFNLKGMINVSDIQK 201


>gi|88799740|ref|ZP_01115314.1| hex regulon repressor [Reinekea sp. MED297]
 gi|88777474|gb|EAR08675.1| hex regulon repressor [Reinekea sp. MED297]
          Length = 286

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/148 (18%), Positives = 52/148 (35%), Gaps = 4/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
                 V+ +   + R+   G+G SG +            TP      A           
Sbjct: 118 NALSRTVDALSQAR-RIGFYGLGASGSVAMDAHHKFFRLNTPCAAYTDALQQRMAAAAAK 176

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+++++S +G +  L      AR     +IA+T+   S ++ +    + L  + +   
Sbjct: 177 PGDVVVIISITGRTISLVETAKIARESGATVIALTT-PHSPLSENC--HILLGVDSQENT 233

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
                 TS I+ L I D LA  +     
Sbjct: 234 DIYINMTSRIVYLTILDVLATGVTLKLG 261


>gi|41393093|ref|NP_958872.1| inosine-5'-monophosphate dehydrogenase 2 [Danio rerio]
 gi|28422324|gb|AAH46905.1| IMP (inosine monophosphate) dehydrogenase 2 [Danio rerio]
          Length = 514

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 23/178 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIA+           N +   F                     
Sbjct: 62  KTPLISSPMDTVTESGMAIAMALTGGIGFIHHNCTPE-FQANE--------VRKVKRYEQ 112

Query: 226 SGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
              + P+V      + D     +   F  + + D G    +L GII+  DI     +  +
Sbjct: 113 GFITDPVVMSPNERVRDVFQAKARHGFCGIPITDNGQMGGRLVGIISSRDI-DFLKESEH 171

Query: 282 TLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + +VM K  +  V      L  A ++L++     L +V++    + I+   DL +
Sbjct: 172 DLPLSEVMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNEEGCLVAIIARTDLKK 229


>gi|20094681|ref|NP_614528.1| CBS domain-containing protein [Methanopyrus kandleri AV19]
 gi|19887845|gb|AAM02458.1| CBS-domain [Methanopyrus kandleri AV19]
          Length = 122

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/113 (24%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-LNTLS 284
             + + +V    PL   +   + +    V VV EG +L GI+T  D+ R         L+
Sbjct: 8   MTEDVVVVGPDEPLERVLRTFASESIHGVPVV-EGGRLIGIVTSVDVVRALASGEWRELT 66

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             DV  +    +  D  L  A+ L+        +VV +  + +G+V  LD +R
Sbjct: 67  AGDV-TRKAVTVDPDEDLETALDLMAAVGEDRAVVV-EDGEIVGVVTVLDAIR 117



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +V D M ++  V+  D  L   ++     +I  + VV +  + IGIV  +D++R 
Sbjct: 3   TVRDAMTEDVVVVGPDEPLERVLRTFASESIHGVPVV-EGGRLIGIVTSVDVVRA 56


>gi|319955413|ref|YP_004166680.1| 3-hexulose-6-phosphate isomerase [Cellulophaga algicola DSM 14237]
 gi|319424073|gb|ADV51182.1| 3-hexulose-6-phosphate isomerase [Cellulophaga algicola DSM 14237]
          Length = 194

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/197 (20%), Positives = 75/197 (38%), Gaps = 17/197 (8%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +   V+ A+ +II E          L   L ++   A+  +     R+ + G G++G + 
Sbjct: 9   ETQVVENAMNTIINE-------HIKLIHTLKYEEIAALIPVINNADRLFVMGAGRTGLMM 61

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
              A  L   G     V    A       I + DL+I  S SG++  + +    A++   
Sbjct: 62  KAAAMRLMHLGYTVHVVGETTAP-----AIMKGDLLIAGSGSGNTSGIVSAAETAKKVGA 116

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPT---TSAIMQL--AIGDALAIALL 194
            ++  T+  +S +A  A+  +T+P   +             S   Q    + DAL  +L 
Sbjct: 117 AVLCFTTNKESPLAQLANQTVTIPAAQKQERVEAVSKQYAGSLFEQSLLLVFDALIQSLW 176

Query: 195 ESRNFSENDFYVLHPGG 211
           E    S ++ +  H   
Sbjct: 177 EIEGTSTSELWKRHANM 193


>gi|28378307|ref|NP_785199.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum WCFS1]
 gi|254556514|ref|YP_003062931.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum JDM1]
 gi|308180457|ref|YP_003924585.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
 gi|28271142|emb|CAD64047.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum WCFS1]
 gi|254045441|gb|ACT62234.1| glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus plantarum JDM1]
 gi|308045948|gb|ADN98491.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ST-III]
          Length = 398

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
            G  L  A+  + +KR   + V DE   LKG+I   D+  NF+   +  SV D+M  +  
Sbjct: 265 PGKSLTVALRQMHDKRVDSLLVTDEAGILKGVIGIEDVDYNFN---SATSVGDIMKTDLF 321

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  ++L+   ++ + +  +  + VVD+  + +GIV 
Sbjct: 322 YVQSNSLIRDTVERILKRGLKNIPVVDEQHRLVGIVT 358



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 23/202 (11%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +  +   A  ++ L + PE          S   Q  IG   A+A  +     +  F  L
Sbjct: 108 PQDKMNERAKKMIKLVELPEDYLDRYPSELSGGQQQRIGVVRALAADQDLVLMDEPFGAL 167

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P              +        V +   + +A+ + +        V+ +G  +  + 
Sbjct: 168 DP--ITRESLQDLVKDLQERLGKTFVFVTHDMDEALKLATR------IVIMDGGDIMQVD 219

Query: 268 T-EGDIF--------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           T +G +               R      +  +V  VM+K+P        LTVA++ +   
Sbjct: 220 TPDGILRHPANEFVENLIGKDRLIQARPSITTVGQVMLKDPIATTPGKSLTVALRQMHDK 279

Query: 313 NISVLMVVDDCQKAIGIVHFLD 334
            +  L+V D+     G++   D
Sbjct: 280 RVDSLLVTDEAGILKGVIGIED 301


>gi|331006175|ref|ZP_08329499.1| Acetoin utilization protein AcuB [gamma proteobacterium IMCC1989]
 gi|330420006|gb|EGG94348.1| Acetoin utilization protein AcuB [gamma proteobacterium IMCC1989]
          Length = 99

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 17/91 (18%), Positives = 38/91 (41%), Gaps = 12/91 (13%)

Query: 260 GQKLKGIITEGDIFRNFHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQ 307
             KL G++++ D+ +    ++ T              V  VM +    +     +  A+ 
Sbjct: 3   DGKLLGVVSDRDLLKVLSPNIGTAAETLKDLSCLNKKVHQVMTRQLITLEATADVYDAIA 62

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  +H +S + +VD      GI+ + D+L+ 
Sbjct: 63  IFNRHRVSCIPIVDKSLVIQGILSWRDILKA 93



 Score = 39.5 bits (91), Expect = 0.67,   Method: Composition-based stats.
 Identities = 15/62 (24%), Positives = 31/62 (50%), Gaps = 2/62 (3%)

Query: 219 CASDVMHSGDSIPLVKIGCP--LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           C +  +H   +  L+ +     + DAI I +  R  C+ +VD+   ++GI++  DI +  
Sbjct: 35  CLNKKVHQVMTRQLITLEATADVYDAIAIFNRHRVSCIPIVDKSLVIQGILSWRDILKAL 94

Query: 277 HK 278
            +
Sbjct: 95  ER 96


>gi|290889727|ref|ZP_06552815.1| hypothetical protein AWRIB429_0205 [Oenococcus oeni AWRIB429]
 gi|290480551|gb|EFD89187.1| hypothetical protein AWRIB429_0205 [Oenococcus oeni AWRIB429]
          Length = 242

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 42  ESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
                  L  Q+   +  IK +      V   GIG SG +    +   A+ G  SF+   
Sbjct: 86  RDFFNRPLLDQYQNTITDIKNVIENSKMVFFFGIGTSGILAEYGSRQFANFGINSFYNKD 145

Query: 99  AEASHGDLGMITRD---DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
               +    +I +D    ++IVLS SG + E+   +   +     +I+IT+ + S+VA  
Sbjct: 146 ---PYYPFQLIEKDISSTVMIVLSVSGETHEVIKQITSLKNLKCKIISITNTSYSMVAKL 202

Query: 156 ADIVLTLPKEPESCPHGLAPTT 177
           +DI L+     E  P  +  T+
Sbjct: 203 SDINLSYNIGEEVFPDEINATS 224


>gi|317049921|ref|YP_004117569.1| RpiR family transcriptional regulator [Pantoea sp. At-9b]
 gi|316951538|gb|ADU71013.1| transcriptional regulator, RpiR family [Pantoea sp. At-9b]
          Length = 280

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 52/129 (40%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  +   Q + AV+ +   +  + I G+ +S  + S L   L      +F
Sbjct: 123 SQALQQLAMQVNPD---QLNKAVKMLNEAEN-IYIIGLRRSFSVASYLVYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFTEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAHQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|167836867|ref|ZP_02463750.1| CBS domain protein [Burkholderia thailandensis MSMB43]
          Length = 154

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL  A+  ++E   G + VV E   L GI+T  +I      +   +  + V  VM
Sbjct: 17  VTPDTPLRSAVDTMAEHDIGSL-VVMEYGDLVGILTFREIILRLKANGGSIGDVLVRTVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDIDEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.5 bits (91), Expect = 0.78,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +GI+ F +++
Sbjct: 16  TVTPDTPLRSAVDTMAEHDIGSLVVM-EYGDLVGILTFREII 56


>gi|163790499|ref|ZP_02184929.1| transcriptional regulator (RpiR family) protein [Carnobacterium sp.
           AT7]
 gi|159874252|gb|EDP68326.1| transcriptional regulator (RpiR family) protein [Carnobacterium sp.
           AT7]
          Length = 282

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/186 (20%), Positives = 75/186 (40%), Gaps = 10/186 (5%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
           +++ +  A +   +  + L+  +  L  +   +   AV+ +   +  V   G+G S  I 
Sbjct: 91  EDNELLMAQKVFDSNIKSLNDTKKLLDEQ---ELIKAVQFLTGAQT-VGFFGVGGSSIIA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
                    T   S ++  +         +T +D  I++S SG + +   +    +    
Sbjct: 147 MDAYHKFLRTPLNSTYMQDSHIQMMQASRLTENDCAIIISHSGITKDTIQLAEIIKEKKA 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            +I ITS + S +A  AD +L    E           TS I QL++ DAL ++++    F
Sbjct: 207 KIIIITSYSLSPLAKFADALLLSTAEETDYRSEAL--TSRITQLSLIDALFVSVM----F 260

Query: 200 SENDFY 205
              DF 
Sbjct: 261 KTGDFA 266


>gi|325571472|ref|ZP_08146972.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
 gi|325155948|gb|EGC68144.1| RpiR family phosphosugar-binding transcriptional regulator
           [Enterococcus casseliflavus ATCC 12755]
          Length = 254

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/120 (25%), Positives = 56/120 (46%), Gaps = 3/120 (2%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+     +       AVE I + +  V  +GIG SG +G+  +   A+ G  ++ +    
Sbjct: 100 LKKVNNEDYRKFIQPAVELILSAR-HVAFSGIGTSGILGTYGSRYFANLGINAYSIVDPF 158

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                 GM   + L I+LS SG + ++       +R+   +++IT++ KS +A  AD  +
Sbjct: 159 LPVPSRGM--ENTLAIILSVSGETIQMIKQTEDFKRYGAKVLSITNDEKSTIAQMADYNI 216


>gi|182417920|ref|ZP_02949230.1| transcriptional regulator, RpiR family [Clostridium butyricum 5521]
 gi|237669368|ref|ZP_04529350.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
 gi|182378229|gb|EDT75763.1| transcriptional regulator, RpiR family [Clostridium butyricum 5521]
 gi|237655255|gb|EEP52813.1| transcriptional regulator, RpiR family [Clostridium butyricum E4
           str. BoNT E BL5262]
          Length = 249

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/160 (19%), Positives = 68/160 (42%), Gaps = 5/160 (3%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
            EL  +     + I      +V  G G SG +    A   +S G  + ++          
Sbjct: 95  EELDEKIEAVCDLITDSAN-LVFLGSGTSGILCKYAARYFSSLGKFATYIDDPYFPTNY- 152

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
                + +II+LS SG +  +  I+   +R + P+++IT+     ++  +D+ ++     
Sbjct: 153 -KTYENCVIIILSVSGETPTVINIINNFKRENCPIVSITNSENCTISKISDLNISYYINQ 211

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           E    G++  T+ +  L I + +A +L    + + ++F  
Sbjct: 212 E--KIGISDITTQVPVLYIIETIARSLHNKVDENSDEFNK 249


>gi|126459613|ref|YP_001055891.1| glucosamine--fructose-6-phosphate aminotransferase [Pyrobaculum
           calidifontis JCM 11548]
 gi|126249334|gb|ABO08425.1| glutamine--fructose-6-phosphate transaminase [Pyrobaculum
           calidifontis JCM 11548]
          Length = 602

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/160 (24%), Positives = 72/160 (45%), Gaps = 5/160 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
            SL S++ G    Q     + + + +  + + G G S H G   A+ L         + A
Sbjct: 267 ESLASTVAGLEWAQLSAVADMLLSARN-IYVLGAGSSYHAGLTFAARLPRLRLTPVPIIA 325

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           +E    +  +  RDD+ I +S SG + +        R   + ++A+T+   S +A  +D+
Sbjct: 326 SEYYTYER-LFDRDDVAIAISQSGETIDTIRAARAMRERGVKVVAVTNVVGSTLARESDV 384

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           V+     PE    G+A T +   Q+A   AL +A+L++  
Sbjct: 385 VIYTRAGPE---IGVAATKTFTTQVATLSALYLAVLKAVG 421


>gi|73748579|ref|YP_307818.1| M50 family metallopeptidase [Dehalococcoides sp. CBDB1]
 gi|289432605|ref|YP_003462478.1| peptidase M50 [Dehalococcoides sp. GT]
 gi|73660295|emb|CAI82902.1| metallopeptidase, M50 family [Dehalococcoides sp. CBDB1]
 gi|288946325|gb|ADC74022.1| peptidase M50 [Dehalococcoides sp. GT]
          Length = 379

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGD 271
           +  +    +           ++    L  A+   +       + V  E  KL G+I+  D
Sbjct: 237 ISEILREVNISRVMKREFKTIEPDNTLYQALHEYILPLNQRALPVF-ENGKLAGLISLSD 295

Query: 272 IFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           I +     LN  SV   M      + +  +  L   + LL+  +I+ L V+ +  K IG+
Sbjct: 296 IKKIPTNQLNQTSVRQAMTPFEKLRTVGPEEHLGNVLNLLQSEDINQLPVLSE-GKLIGL 354

Query: 330 VHFLDLLRF 338
           +   DL+ +
Sbjct: 355 ISRTDLIEY 363


>gi|293416931|ref|ZP_06659568.1| sugar isomerase [Escherichia coli B185]
 gi|291431507|gb|EFF04492.1| sugar isomerase [Escherichia coli B185]
          Length = 185

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/182 (21%), Positives = 79/182 (43%), Gaps = 12/182 (6%)

Query: 33  AEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTP 92
            ++  L+ L ++L    + +    + +I+A +  V   G+G+       +A  LA  G  
Sbjct: 6   NQENVLAELRATLGNISADEVERLIARIEAAEN-VFFVGVGRVLLSLQAMAKRLAHLGIK 64

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
           ++ V            IT  DL+IV S SG S     I   A+ F   ++ I +  +S +
Sbjct: 65  TYVVGQITEP-----AITERDLLIVGSGSGESMFPLGIARKAKSFHASVVHIGANPESSM 119

Query: 153 ACHADIVLTLPKEPE----SCPHGLAPTTSAIMQL--AIGDALAIALLESRNFSENDFYV 206
             ++D+ + +  + +    S    + P TS   Q    +GD +A+ L+  R  + ++ + 
Sbjct: 120 KAYSDLFVRIGVKTKLNLPSEIPSIQPMTSLFEQSLLLLGDIVALELIGKRKINMHELWQ 179

Query: 207 LH 208
            H
Sbjct: 180 FH 181


>gi|161507801|ref|YP_001577765.1| transcriptional regulator [Lactobacillus helveticus DPC 4571]
 gi|160348790|gb|ABX27464.1| transcriptional regulator [Lactobacillus helveticus DPC 4571]
          Length = 279

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/192 (19%), Positives = 73/192 (38%), Gaps = 12/192 (6%)

Query: 12  TRKGHSLMK--NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI 69
             K HSL       +Q AL+ I      ++ +E++L    S +    ++ I      + +
Sbjct: 77  NEKSHSLQNIAKDDLQTALKQIDD--NKVAEIEATLLNVDSQKLKKVLD-ILTHSRVIQV 133

Query: 70  TGIGKSGHIGSKLASTLASTGTPSF----FVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           +  G +  + +         G  +      V  A A   +LG    +D+++V+S SG S 
Sbjct: 134 SAEGDTYPVAADAVYKFNQIGLFAMASGGNVETAIAQTMNLG---HEDVLLVISNSGESA 190

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
            L   +  A++  + +I IT+ + S +A  +D  L               +  A   +  
Sbjct: 191 ALLKQIKVAQQQGMKIITITNRSDSPIALESDYHLQTAVRQTVLQTQYYFSRVAAFTMIE 250

Query: 186 GDALAIALLESR 197
              L +   + R
Sbjct: 251 AIFLILISQDDR 262


>gi|332686500|ref|YP_004456274.1| CBS domain containing protein [Melissococcus plutonius ATCC 35311]
 gi|332370509|dbj|BAK21465.1| CBS domain containing protein [Melissococcus plutonius ATCC 35311]
          Length = 167

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/113 (30%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-------HKDLNTLSV 285
           V    PL  A+ +LS+ ++  + V+D+  +  G+I+  DI            K+LN  +V
Sbjct: 27  VMSSHPLNHAVLVLSKVKYSKIPVLDKNDQFVGLISLADIMGKMFSITSIDLKNLNKYTV 86

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            DVM +   VI ED  L   +  L     S L VVD  Q   GI+   ++L+ 
Sbjct: 87  SDVMEREVTVIHEDWELEDVLHFLVDT--SFLPVVDKYQCFKGIITRKEILKA 137


>gi|302349138|ref|YP_003816776.1| Glutamine-fructose-6-phosphate transaminase [Acidilobus
           saccharovorans 345-15]
 gi|302329550|gb|ADL19745.1| Glutamine-fructose-6-phosphate transaminase [Acidilobus
           saccharovorans 345-15]
          Length = 588

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/156 (19%), Positives = 63/156 (40%), Gaps = 2/156 (1%)

Query: 32  IAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGT 91
           + E   +          L  ++      I     R  I G G S H G   A   +S G 
Sbjct: 245 LKEIYEIPEALERTTHSLMDKYLRLSGMILYGARRAFIIGNGTSLHAGMVSAYYFSSLGG 304

Query: 92  PSFFV-HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
            S  V  AAE  +  L  +    +++ +S SG + ++   +  A++    ++ +T+   S
Sbjct: 305 MSIDVVSAAEFPYYALDSVGTGTVVLAVSQSGETSDVIRSVKMAKQRGAVIVGVTNVLGS 364

Query: 151 VVACHADIVLTLPKEPE-SCPHGLAPTTSAIMQLAI 185
            +A  +++ L +   PE + P     T++ +  + +
Sbjct: 365 RLALESNVYLPIGAGPELAVPATKTFTSTLVALMLL 400


>gi|227827987|ref|YP_002829767.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.14.25]
 gi|227459783|gb|ACP38469.1| glucosamine--fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus M.14.25]
          Length = 591

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRESS-RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|126179453|ref|YP_001047418.1| sugar isomerase (SIS) [Methanoculleus marisnigri JR1]
 gi|125862247|gb|ABN57436.1| 3-hexulose-6-phosphate isomerase [Methanoculleus marisnigri JR1]
          Length = 211

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/215 (19%), Positives = 73/215 (33%), Gaps = 29/215 (13%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
           V     + M N  V+  +R +  + R ++ + S        +    + +I     R+   
Sbjct: 5   VKPNSGTTMTNHPVKNMMRLMATKIRTIADVMS------DDEIDTLLAEILNA-NRIYTM 57

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G G+SG +    A  L   G  +F V            +   D+IIV S SG++  +  I
Sbjct: 58  GAGRSGLVAKSFAMRLMHLGLSAFVVGETVTP-----AMKPGDVIIVFSGSGATKTVADI 112

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP--------------- 175
              A+     +  ITS+  S +   AD ++ +  + +      A                
Sbjct: 113 SETAKEIGGRICLITSKKDSRIGRIADCIVIIESQRDKVADESAEFEIRQMMGEHKSFAP 172

Query: 176 --TTSAIMQLAIGDALAIALLESRNFSENDFYVLH 208
             T      +   DA+   L+E       D    H
Sbjct: 173 LGTIFETTAMVFADAIISRLMEITQCRPEDLQCRH 207


>gi|323475077|gb|ADX85683.1| glucosamine-fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus REY15A]
 gi|323477809|gb|ADX83047.1| glucosamine-fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus HVE10/4]
          Length = 591

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRKSS-RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|169158048|emb|CAQ13978.1| IMP (inosine monophosphate) dehydrogenase 2 [Danio rerio]
          Length = 514

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/178 (18%), Positives = 60/178 (33%), Gaps = 23/178 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIA+           N +   F                     
Sbjct: 62  KTPLISSPMDTVTESGMAIAMALTGGIGFIHHNCTPE-FQANE--------VRKVKRYEQ 112

Query: 226 SGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
              + P+V      + D     +   F  + + D G    +L GII+  DI     +  +
Sbjct: 113 GFITDPVVMSPNERVRDVFQAKARHGFCGIPITDNGQMGGRLVGIISSRDI-DFLKESEH 171

Query: 282 TLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + +VM K  +  V      L  A ++L++     L +V++    + I+   DL +
Sbjct: 172 DLPLSEVMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNEEGCLVAIIARTDLKK 229


>gi|168177569|ref|ZP_02612233.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium botulinum NCTC 2916]
 gi|182671286|gb|EDT83260.1| putative phosphosugar-binding transcriptional regulator
           [Clostridium botulinum NCTC 2916]
          Length = 291

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/162 (18%), Positives = 63/162 (38%), Gaps = 3/162 (1%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           ++ +L    +     AVE I      + +    +S  I    A  +              
Sbjct: 109 IKDTLSLLSNDDLKNAVE-ILNSASDIKLFANNESILISQDFALKMNRIKKYVSICTVDG 167

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
               +     ++   I++S+SG +  L   +   ++++IP++AITS   + +A +A+ VL
Sbjct: 168 EQVFEAFNCRKNSCAIIISYSGETKRLLETIPILKKYNIPILAITSLGNNTLANNANCVL 227

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
            +             T++  +     D L   +  S+NF +N
Sbjct: 228 RITTREHLYSKISNFTSNNSICFI-LDILYSCIF-SKNFEKN 267


>gi|118586599|ref|ZP_01544040.1| transcriptional regulator, CBS domain [Oenococcus oeni ATCC
           BAA-1163]
 gi|118432978|gb|EAV39703.1| transcriptional regulator, CBS domain [Oenococcus oeni ATCC
           BAA-1163]
          Length = 219

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 6/105 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMI 290
           +K    L  A+  L  K  G + VV+E   L G+I+  D+ R    + ++ ++    +M 
Sbjct: 97  IKASDTLQVAVGKLFLKDVGSLYVVNEKGDLVGLISRKDLLRASLNNSNVQSMMASIIMT 156

Query: 291 KNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIGIVH 331
           + P       D  +  A +LL  H +  L VV+    + AIG + 
Sbjct: 157 RMPNIITATPDMSVIEAGKLLLLHKVDSLPVVEKQSSRHAIGKIT 201


>gi|145593406|ref|YP_001157703.1| inosine 5-monophosphate dehydrogenase [Salinispora tropica CNB-440]
 gi|145302743|gb|ABP53325.1| IMP dehydrogenase family protein [Salinispora tropica CNB-440]
          Length = 479

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/174 (17%), Positives = 57/174 (32%), Gaps = 10/174 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P   + M    G  +A  +      +    D     P   +  + 
Sbjct: 31  LDVDLSTGDGTGTTIPLVVSNMTAVAGRRMAETVARRGGIAVIPQDI----PIEVVANVV 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+  ++     + DAI +L ++  G V VVDE  +  G++TE D      
Sbjct: 87  AWVKQRHLVYDTPIILGPTDTVGDAIHLLPKRSHGAVVVVDESGRPVGVVTEAD---TVG 143

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            D     ++ VM      +  D         L      +  VVD+  + +G++ 
Sbjct: 144 VDRF-AQLQHVMSAELHTVSADADPRTGFDRLSAGRRRLAPVVDEQGRLVGVLT 196


>gi|54293739|ref|YP_126154.1| hypothetical protein lpl0792 [Legionella pneumophila str. Lens]
 gi|53753571|emb|CAH15026.1| hypothetical protein lpl0792 [Legionella pneumophila str. Lens]
          Length = 500

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/98 (22%), Positives = 47/98 (47%), Gaps = 1/98 (1%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVIL 297
           L  A+  L     G + +VD  + L   +T+GDI R   K      ++E++   + K + 
Sbjct: 15  LKTALKKLDATAQGVLFLVDSDECLIRTVTDGDIRRLLLKGFTLDSTLEELSEHSSKALP 74

Query: 298 EDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               +  A  L++++ +  + V+D+  + I ++H  +L
Sbjct: 75  VSATIQDAYHLMQEYELDHIPVIDESNRPIRLIHRREL 112


>gi|331650840|ref|ZP_08351868.1| transcriptional regulator, RpiR family [Escherichia coli M718]
 gi|331051294|gb|EGI23343.1| transcriptional regulator, RpiR family [Escherichia coli M718]
          Length = 301

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/166 (22%), Positives = 63/166 (37%), Gaps = 3/166 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S LE+  +         AV  +   +  + +   G S     ++   L   G P    +
Sbjct: 116 ISVLETHRRSLDMNAISQAVSWLSQARQILALGTGGGSTICSQEIQYRLFRLGLPVVSQN 175

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            A         +   D++IVLS  G + E+      AR++   +IAIT   ++ +A   D
Sbjct: 176 DALMMRMMCSAVMPQDVVIVLSLGGYTPEIIESAAIARQYGARVIAITP-AQTPLAEQVD 234

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
           +VL L  +         P  S    LA+ D LA  L  +      D
Sbjct: 235 LVLPLLVQESDYIFKPTP--SRYAMLAMVDVLATELAMANKAQAKD 278


>gi|227550873|ref|ZP_03980922.1| ABC superfamily ATP binding cassette transporter, ATPase
           [Enterococcus faecium TX1330]
 gi|257887875|ref|ZP_05667528.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,141,733]
 gi|257893326|ref|ZP_05672979.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,408]
 gi|257896507|ref|ZP_05676160.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium Com12]
 gi|293379286|ref|ZP_06625432.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium PC4.1]
 gi|227179971|gb|EEI60943.1| ABC superfamily ATP binding cassette transporter, ATPase
           [Enterococcus faecium TX1330]
 gi|257823929|gb|EEV50861.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,141,733]
 gi|257829705|gb|EEV56312.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium 1,231,408]
 gi|257833072|gb|EEV59493.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus faecium Com12]
 gi|292642082|gb|EFF60246.1| glycine betaine/L-proline transport ATP binding subunit
           [Enterococcus faecium PC4.1]
          Length = 391

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 45/99 (45%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I   D+     K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI---DVETLNKKRGKVSSVGDILNKH 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +   L   +Q + +  +  + VVD+  K +GI+ 
Sbjct: 319 VFYVKKSAYLRDTLQRILKRGLKYVPVVDEQNKVVGILT 357



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 14/57 (24%), Positives = 25/57 (43%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      N   V +VM+     I  +  L  A++L+R+  +  L+V D+     G +
Sbjct: 240 RLLQAKPNATRVGEVMLNTAITITPEKSLQEAIKLMREKRVDTLLVTDNSNVLKGFI 296


>gi|218688144|ref|YP_002396356.1| putative transcriptional regulator [Escherichia coli ED1a]
 gi|218425708|emb|CAR06507.1| putative transcriptional regulator [Escherichia coli ED1a]
          Length = 277

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 5/157 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   ++ E   Q   AV  +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQVLQQLPVQIKNE---QLDAAVNLLAKADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M++ DD++I +S+S  + E+  ++    +     IAIT    S +A
Sbjct: 179 LIDGIGGMFSEQLSMVSSDDVVIAISYSPYAQEVVELVELGAKRGAHYIAITDSQVSPLA 238

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
             +++   + +           +      LA+  ALA
Sbjct: 239 AFSEVCFVVREAQVDGFRSQVASMCLAQTLAVSLALA 275


>gi|217967300|ref|YP_002352806.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Dictyoglomus turgidum DSM 6724]
 gi|217336399|gb|ACK42192.1| putative anti-sigma regulatory factor, serine/threonine protein
           kinase [Dictyoglomus turgidum DSM 6724]
          Length = 290

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/93 (25%), Positives = 45/93 (48%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLT 303
            I+  KR   + +VD+ + L G++T  ++     K    +  E  M+++PK +  D  L 
Sbjct: 35  EIMRIKRIDAIPIVDDLENLIGLVTVENVINALAKGDINVPCEKYMVRDPKCLKPDDNLY 94

Query: 304 VAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            A+   R+       VVD+  K +GI+   D++
Sbjct: 95  EALIKFRRFRFGRFPVVDEKGKVLGILSTKDIV 127



 Score = 42.6 bits (99), Expect = 0.079,   Method: Composition-based stats.
 Identities = 12/59 (20%), Positives = 28/59 (47%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L  + V+D+M  +   +     +    +++R   I  + +VDD +  IG+V   +++  
Sbjct: 8   LEKIKVKDIMNTDIVRLRPYQDMRSIQEIMRIKRIDAIPIVDDLENLIGLVTVENVINA 66


>gi|186472537|ref|YP_001859879.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184194869|gb|ACC72833.1| CBS domain containing membrane protein [Burkholderia phymatum
           STM815]
          Length = 202

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 15/128 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  V +   +  A+  L       + VVD   +LKG++T  D+             
Sbjct: 67  MRTPPVTVSVDETIGGALKTLDAHHIKLLPVVDTHGRLKGVVTHVDLQPLDEVLPFLKLA 126

Query: 275 ----NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                   +     V  VM  + + +   T LT  + L   +    L VV++  + +G++
Sbjct: 127 SDTTAPESERREWPVTTVMSAHVRYVDVLTPLTEIIPLFTTNGHHHLPVVEEGGRVVGML 186

Query: 331 HFLDLLRF 338
              D+L+ 
Sbjct: 187 TQADILKL 194



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 19/63 (30%), Positives = 32/63 (50%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            + +  +L  L+  DVM   P  +  D  +  A++ L  H+I +L VVD   +  G+V  
Sbjct: 51  RQAYLHELLRLTCADVMRTPPVTVSVDETIGGALKTLDAHHIKLLPVVDTHGRLKGVVTH 110

Query: 333 LDL 335
           +DL
Sbjct: 111 VDL 113



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                  + VM     +  V +  PL + I + +      + VV+EG ++ G++T+ DI 
Sbjct: 135 ERREWPVTTVM--SAHVRYVDVLTPLTEIIPLFTTNGHHHLPVVEEGGRVVGMLTQADIL 192

Query: 274 RNF 276
           +  
Sbjct: 193 KLM 195


>gi|150015635|ref|YP_001307889.1| RpiR family transcriptional regulator [Clostridium beijerinckii
           NCIMB 8052]
 gi|149902100|gb|ABR32933.1| transcriptional regulator, RpiR family [Clostridium beijerinckii
           NCIMB 8052]
          Length = 294

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 3/156 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +LE +L+     ++  A+E I++    + + G+G SG + S + +     G       
Sbjct: 115 IKALEDTLKIIDINKYKKAIEMIRSS-NIIDVYGVGNSGSVASDIRNKFLRIGLECRAYS 173

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T +DL I +S SGS+ +    L  A+      IA+T+     ++ +AD
Sbjct: 174 DSNIQQICASHLTSNDLAIGVSHSGSTIDTVNALKIAKESGARTIALTNFKAPAISEYAD 233

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL 193
           I      E  +         S I QLAI D L + +
Sbjct: 234 ITFFTGGEETTFYSET--MVSRISQLAIVDMLYMGI 267


>gi|224535868|ref|ZP_03676407.1| hypothetical protein BACCELL_00732 [Bacteroides cellulosilyticus
           DSM 14838]
 gi|224522591|gb|EEF91696.1| hypothetical protein BACCELL_00732 [Bacteroides cellulosilyticus
           DSM 14838]
          Length = 596

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 4/126 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H   K     +   +V+       +V     L + +  +S  R     V D+   L GI+
Sbjct: 455 HHKDKAVLTLMKVENVV--EKDFVVVHPEMDLGELVKAISASRRNIFPVTDKSGILIGIV 512

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T  DI       +  +  +V  +M   P  + +   +   M+         L VVD+   
Sbjct: 513 TLDDIRNIMFRQELYHRFTVGKLMTAIPARLYDTDSMEQVMRTFDDTKAWNLPVVDEEGH 572

Query: 326 AIGIVH 331
            +G V 
Sbjct: 573 YLGFVS 578



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + VE+V+ K+  V+  +  L   ++ +     ++  V D     IGIV   D+
Sbjct: 462 LTLMKVENVVEKDFVVVHPEMDLGELVKAISASRRNIFPVTDKSGILIGIVTLDDI 517


>gi|199599183|ref|ZP_03212586.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Lactobacillus rhamnosus HN001]
 gi|229551028|ref|ZP_04439753.1| possible quaternary-amine-transporting ATPase [Lactobacillus
           rhamnosus LMS2-1]
 gi|258507073|ref|YP_003169824.1| glycine betaine/L-proline ABC transporter ATP-binding protein
           [Lactobacillus rhamnosus GG]
 gi|258538261|ref|YP_003172760.1| glycine betaine/L-proline ABC transporter ATPase [Lactobacillus
           rhamnosus Lc 705]
 gi|199589936|gb|EDY98039.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Lactobacillus rhamnosus HN001]
 gi|229315623|gb|EEN81596.1| possible quaternary-amine-transporting ATPase [Lactobacillus
           rhamnosus LMS2-1]
 gi|257147000|emb|CAR85973.1| ABC transporter, Glycine betaine/L-proline transporter ATP-binding
           protein [Lactobacillus rhamnosus GG]
 gi|257149937|emb|CAR88909.1| ABC transporter, Glycine betaine/L-proline transporter ATPase
           component [Lactobacillus rhamnosus Lc 705]
 gi|259648443|dbj|BAI40605.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           component [Lactobacillus rhamnosus GG]
          Length = 415

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  L +AI+++ ++R   + V D+   LKG I   D+     +  +  SV D+   +
Sbjct: 268 ITPGKSLAEAISLMRKRRVDTLLVTDDEDHLKGFI---DLESLETRYQSATSVSDITKSS 324

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +D LL      + +     + VVD+ QK +GIV 
Sbjct: 325 IFYVKKDALLRDTADRILKRGFKYVPVVDNDQKLVGIVT 363



 Score = 59.5 bits (143), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      +  +VE +M+KNP  I     L  A+ L+R+  +  L+V DD     G +  
Sbjct: 246 RLVQARADVTTVEQIMLKNPAAITPGKSLAEAISLMRKRRVDTLLVTDDEDHLKGFIDL 304


>gi|300711378|ref|YP_003737192.1| CBS domain-containing protein [Halalkalicoccus jeotgali B3]
 gi|299125061|gb|ADJ15400.1| CBS domain-containing protein [Halalkalicoccus jeotgali B3]
          Length = 143

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/115 (23%), Positives = 49/115 (42%), Gaps = 5/115 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTL 283
               +       P+ +A  +L++   G + V    ++++GI+TE D+     +   L   
Sbjct: 10  MTSPVRTTSPETPVTEAARVLTDHGIGSLVV--GEERIEGIVTESDVVAGVAEGVALAET 67

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            V  +M      I     + VA + + ++N+  L V     +AIGIV   DL R 
Sbjct: 68  PVSALMSDPVVTIDPTASVRVAGERMGRNNVKKLPVA-RNGEAIGIVTTTDLARL 121



 Score = 44.9 bits (105), Expect = 0.018,   Method: Composition-based stats.
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 3/61 (4%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +    V D+M    +    +T +T A ++L  H I  L+V    ++  GIV   D++  G
Sbjct: 1   MMDSPVTDLMTSPVRTTSPETPVTEAARVLTDHGIGSLVV--GEERIEGIVTESDVV-AG 57

Query: 340 I 340
           +
Sbjct: 58  V 58


>gi|88705940|ref|ZP_01103648.1| acetoin utilization protein AcuB [Congregibacter litoralis KT71]
 gi|88699654|gb|EAQ96765.1| acetoin utilization protein AcuB [Congregibacter litoralis KT71]
          Length = 147

 Score = 64.9 bits (157), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/56 (32%), Positives = 29/56 (51%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           LSV ++M   P  +  D  L  A  L+R+H+I  + +V +    IG+V   D+L  
Sbjct: 2   LSVAEIMTPQPYTLGPDDSLLDAASLMREHHIRHVPIVANDGNVIGVVSHRDVLAA 57



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 48/126 (38%), Gaps = 12/126 (9%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
                  +     L+DA +++ E     V +V     + G+++  D+      R  H+DL
Sbjct: 8   MTPQPYTLGPDDSLLDAASLMREHHIRHVPIVANDGNVIGVVSHRDVLAASDSRLVHQDL 67

Query: 281 NT------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      +++  VM    + + ED  L      LR+  +  + V       +GI+   D
Sbjct: 68  QSSAKENYVALSAVMTSPVQTVTEDAELRAVAGYLRKQRLGCMPVT-RDGALVGIISDSD 126

Query: 335 LLRFGI 340
            L   I
Sbjct: 127 FLEVAI 132



 Score = 36.4 bits (83), Expect = 6.9,   Method: Composition-based stats.
 Identities = 18/106 (16%), Positives = 37/106 (34%), Gaps = 2/106 (1%)

Query: 183 LAIGDALAIALLESRN-FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLID 241
           +   D   I ++  R+  + +D  ++H   +        +        +  V     L  
Sbjct: 38  IVANDGNVIGVVSHRDVLAASDSRLVHQDLQSSAKENYVALSAVMTSPVQTVTEDAELRA 97

Query: 242 AITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               L ++R GC+ V      L GII++ D        +  L + +
Sbjct: 98  VAGYLRKQRLGCMPVT-RDGALVGIISDSDFLEVAIALMEQLEMAE 142


>gi|332796564|ref|YP_004458064.1| 6-phospho 3-hexuloisomerase [Acidianus hospitalis W1]
 gi|332694299|gb|AEE93766.1| 6-phospho 3-hexuloisomerase [Acidianus hospitalis W1]
          Length = 173

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/162 (22%), Positives = 61/162 (37%), Gaps = 20/162 (12%)

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
              G+V++ G G+SG +G   A  L   G  ++ +            I ++DL I +S S
Sbjct: 12  NRNGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVLGETIVP-----AIGKNDLAIAISGS 66

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG--------- 172
           G +  +      A+     LIA+TS   S +   AD+V+ +P   +              
Sbjct: 67  GRTRLILTAAEAAKEAKATLIAVTSYADSPIGKIADVVVEVPGRTKYSQFEDYFARQILG 126

Query: 173 ----LAPTTSAIM--QLAIGDALAIALLESRNFSENDFYVLH 208
               LAP  +          D +   L+     +E D   +H
Sbjct: 127 ITEPLAPLGTLFEDTTQMFLDGVVAELMLRLKKTEEDLRQIH 168


>gi|296135202|ref|YP_003642444.1| CBS domain containing membrane protein [Thiomonas intermedia K12]
 gi|295795324|gb|ADG30114.1| CBS domain containing membrane protein [Thiomonas intermedia K12]
          Length = 360

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/135 (16%), Positives = 46/135 (34%), Gaps = 5/135 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
                                +        + DA+  L E     + V+D  +++ GI+T
Sbjct: 212 QTQAYQQRLDSVRCSDIMQRDVQTALPDDSVTDALHRLEEHGIKALPVIDAQRQVIGIVT 271

Query: 269 EGDIFRN-----FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
             D+  +          +   V   M +  +V+     L+  + L        + VVDD 
Sbjct: 272 AADLRTDPDAAPSAMRESATPVAARMTRRVQVVSAARHLSELIPLFAGSGHHHIPVVDDA 331

Query: 324 QKAIGIVHFLDLLRF 338
            + +G++   D++R 
Sbjct: 332 ARLVGMITQSDVMRA 346



 Score = 62.2 bits (150), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 50/230 (21%), Positives = 86/230 (37%), Gaps = 25/230 (10%)

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G+S  +   L        P   I       +A    I   L   P     G+A   +  +
Sbjct: 55  GASAVIVFALPS-SPLGRPWSVIGGNTLGTLA---GITCALWIGPPWLAAGMAVGGAIAL 110

Query: 182 QLAIG-----DALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIG 236
            L           A  L    + ++  F    P      L V  + + H+    P     
Sbjct: 111 MLQARCLHPPGGAAALLAVLTHTTDWRFA-FMPVALNSALLVLCALLWHAATRRPHPAPQ 169

Query: 237 CPLIDAIT----ILSEK------RFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSV 285
            P  DA+      LS        R+G   V+D +   L+G++ +    + + + L+++  
Sbjct: 170 -PAADAVLPNADELSSAIDAAVARYG--EVLDIDRATLRGLLEDAQ-TQAYQQRLDSVRC 225

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            D+M ++ +  L D  +T A+  L +H I  L V+D  ++ IGIV   DL
Sbjct: 226 SDIMQRDVQTALPDDSVTDALHRLEEHGIKALPVIDAQRQVIGIVTAADL 275



 Score = 42.6 bits (99), Expect = 0.098,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 25/54 (46%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK 278
                + +V     L + I + +      + VVD+  +L G+IT+ D+ R  H+
Sbjct: 296 RMTRRVQVVSAARHLSELIPLFAGSGHHHIPVVDDAARLVGMITQSDVMRALHR 349


>gi|255327311|ref|ZP_05368385.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
           25296]
 gi|283458602|ref|YP_003363235.1| sialic acid synthase [Rothia mucilaginosa DY-18]
 gi|255295591|gb|EET74934.1| N-acylneuraminate-9-phosphate synthase [Rothia mucilaginosa ATCC
           25296]
 gi|283134650|dbj|BAI65415.1| sialic acid synthase [Rothia mucilaginosa DY-18]
          Length = 747

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 49/123 (39%), Gaps = 7/123 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN 281
            ++    +  +V    P+++A+  +S      + +V+E   L+G +++GD  R    +  
Sbjct: 1   MIIERNIAPYVVFAEDPILNALQKISANGQRIIFLVNESGILRGSLSDGDFRRWLIANPT 60

Query: 282 ---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF--LDLL 336
                S  D    NP+    D      ++      I+ + + D+    +  +     D+L
Sbjct: 61  ASLETSALDAANTNPQTAPADAD-PETLRAYFAKGINHVPLTDERGHLV-ALAMDEQDVL 118

Query: 337 RFG 339
           R G
Sbjct: 119 RIG 121


>gi|189463822|ref|ZP_03012607.1| hypothetical protein BACINT_00155 [Bacteroides intestinalis DSM
           17393]
 gi|189438772|gb|EDV07757.1| hypothetical protein BACINT_00155 [Bacteroides intestinalis DSM
           17393]
          Length = 596

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 4/126 (3%)

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
           H   K     +   +V+       +V     L + +  +S  R     V D+   L GI+
Sbjct: 455 HHKDKAVLTLMKVENVV--EKDFVVVHPEMDLGELVKAISASRRNIFPVTDKSGILIGIV 512

Query: 268 TEGDIFRNF--HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           T  DI       +  +  +V  +M   P  + +   +   M+         L VVD+   
Sbjct: 513 TLDDIRNIMFRQELYHRFTVGKLMTAIPARLYDTDSMEQVMRTFDDTKAWNLPVVDEEGH 572

Query: 326 AIGIVH 331
            +G V 
Sbjct: 573 YLGFVS 578



 Score = 40.3 bits (93), Expect = 0.47,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 26/56 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           L  + VE+V+ K+  V+  +  L   ++ +     ++  V D     IGIV   D+
Sbjct: 462 LTLMKVENVVEKDFVVVHPEMDLGELVKAISASRRNIFPVTDKSGILIGIVTLDDI 517


>gi|308271595|emb|CBX28203.1| hypothetical protein N47_G35270 [uncultured Desulfobacterium sp.]
          Length = 889

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/126 (19%), Positives = 44/126 (34%), Gaps = 4/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEG 270
             +    +           V       DA  IL+      + V    D  ++L G IT  
Sbjct: 314 ENIRTRRTAKQLMSSPPITVSGEVSCKDASGILTRYNINALLVTEKKDGKEELLGYITRQ 373

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            I +  +  L+ + V++ M      +  D  L      + ++   +L V+D      G+V
Sbjct: 374 VIEKALYHKLDDVMVKEYMTTEVASVEPDAELLEIQNKIIENKQRILPVIDKD-VITGVV 432

Query: 331 HFLDLL 336
              DLL
Sbjct: 433 TRTDLL 438


>gi|302345603|ref|YP_003813956.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella melaninogenica ATCC 25845]
 gi|302149016|gb|ADK95278.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella melaninogenica ATCC 25845]
          Length = 615

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 65/153 (42%), Gaps = 11/153 (7%)

Query: 58  EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           +K+   K R++I   G S H   IG +L         P    +A+E  +G+  ++   D+
Sbjct: 294 DKLLNAK-RIIIVACGTSWHAGLIGKQLIEEYCR--IPVQVEYASEFRYGN-PVVGDGDV 349

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S SG + +  A +  A+     +  I +   S +    D    +   PE    G+A
Sbjct: 350 VIAISQSGETADTLAAVELAKSKGAFIYGICNAIGSSIPRATDTGTYIHVGPE---IGVA 406

Query: 175 PTTSAIMQLAIGDALAIALLESRN-FSENDFYV 206
            T +   Q+ +    A+AL   +   SE D+  
Sbjct: 407 STKAFTGQVTVLTMFALALANVKGTISEEDYKK 439


>gi|223365968|pdb|1XKF|A Chain A, Crystal Structure Of Hypoxic Response Protein I (Hrpi)
           With Two Coordinated Zinc Ions
 gi|223365969|pdb|1XKF|B Chain B, Crystal Structure Of Hypoxic Response Protein I (Hrpi)
           With Two Coordinated Zinc Ions
          Length = 133

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
               +  V     L  A   + E   G + +  +  +L G++T+ DI         D NT
Sbjct: 14  MNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNT 73

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  ++   +   +  +  +   + ++ +H +  + V+ +  + +GIV   D+ R
Sbjct: 74  ATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIAR 127



 Score = 52.2 bits (124), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  D+M      + E   LT A Q +R+H+I  L +  D  +  G++   D++  G+
Sbjct: 8   TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGL 65



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G   G     A+    + DSI  V     + + + ++ E +   V V+ E  +L GI+T
Sbjct: 63  KGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEH-RLVGIVT 121

Query: 269 EGDIFRNF 276
           E DI R+ 
Sbjct: 122 EADIARHL 129


>gi|327401879|ref|YP_004342718.1| putative signal transduction protein [Archaeoglobus veneficus SNP6]
 gi|327317387|gb|AEA48003.1| putative signal transduction protein with CBS domains
           [Archaeoglobus veneficus SNP6]
          Length = 388

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 20/72 (27%), Positives = 32/72 (44%)

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
           G+I   D       +   +   +VM      I E      A+  +R H I  L+VVDD  
Sbjct: 114 GVIYINDFLELVKPEFEGVKAREVMNPEVITINEYETAAKALATMRNHGIDRLVVVDDSH 173

Query: 325 KAIGIVHFLDLL 336
           +A+GI+   D++
Sbjct: 174 RAVGIITGKDII 185



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 21/132 (15%), Positives = 38/132 (28%), Gaps = 16/132 (12%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
                     +  +        A+  +       + VVD+  +  GIIT  DI       
Sbjct: 132 VKAREVMNPEVITINEYETAAKALATMRNHGIDRLVVVDDSHRAVGIITGKDIIDRVISP 191

Query: 280 LNTL---------------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                               V  +M         +  +   + L+ ++ IS  +V+    
Sbjct: 192 KREARLGGGSGETDRSLSVMVGSIMSYPIVTADRNDSIAKVIDLMIENKISS-IVITKDS 250

Query: 325 KAIGIVHFLDLL 336
              GIV   D+L
Sbjct: 251 IPEGIVIKKDIL 262


>gi|238786279|ref|ZP_04630222.1| Transcriptional regulator, RpiR family [Yersinia bercovieri ATCC
           43970]
 gi|238712823|gb|EEQ04892.1| Transcriptional regulator, RpiR family [Yersinia bercovieri ATCC
           43970]
          Length = 246

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 3/129 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +S  +S    E       A  +I A   R++  GIG SG +G   A   ++ G  S ++ 
Sbjct: 86  ISYFKSINNSEFDELLDTAAAQI-AASNRIIFVGIGTSGALGKYSARFFSNIGKFSTYID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + +D + I+LS SG ++E+  I          +I++T+   S +A  AD
Sbjct: 145 DPYYPINS--DMYQDAIAIILSVSGETEEIIRIANQFSLHKCKIISLTNSENSTLAKMAD 202

Query: 158 IVLTLPKEP 166
           + ++    P
Sbjct: 203 LNISYHMPP 211


>gi|222445961|ref|ZP_03608476.1| hypothetical protein METSMIALI_01609 [Methanobrevibacter smithii
           DSM 2375]
 gi|222435526|gb|EEE42691.1| hypothetical protein METSMIALI_01609 [Methanobrevibacter smithii
           DSM 2375]
          Length = 279

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 1/106 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLNTLSVEDVMIKN 292
                + D    + +     V VVD+   L GIIT  D+      K  +   VE+ MI  
Sbjct: 75  SPDDDVKDVAKKMIDNNVRRVPVVDDNGDLVGIITSFDLVSNALIKLESDDPVENFMITT 134

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  T L VA + ++Q  +  ++ ++D  K +GI+   D +  
Sbjct: 135 VPTTWYKTPLNVAFETMKQFGLKSVLALNDSAKLVGILTETDFIEE 180



 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/96 (18%), Positives = 43/96 (44%), Gaps = 5/96 (5%)

Query: 242 AITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDT 300
            + ++ ++    + VV  + ++L G+IT  D+      + +   +  +M  +      D 
Sbjct: 23  VLDLMRKEDKEVLPVVKGDTKQLVGLITRSDLI----VNPDEEQIAILMSTDLVTASPDD 78

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +    + +  +N+  + VVDD    +GI+   DL+
Sbjct: 79  DVKDVAKKMIDNNVRRVPVVDDNGDLVGIITSFDLV 114



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 26/135 (19%), Positives = 46/135 (34%), Gaps = 33/135 (24%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------------- 275
            PL  A   + +     V  +++  KL GI+TE D                         
Sbjct: 142 TPLNVAFETMKQFGLKSVLALNDSAKLVGILTETDFIEESEIISERSEHSSTVGTEGDKW 201

Query: 276 ---------FHKDLNTLS---VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                      K+    +   VEDV     +V+   T  +   + ++  NI  + V+   
Sbjct: 202 SWDSTSVLYIEKNCLKFTDKLVEDVGTHKVEVVNSKTKASDCAKKMKTLNIEQIPVIGVE 261

Query: 324 QKAIGIVHFLDLLRF 338
            + IG+V   DL++ 
Sbjct: 262 GELIGLVRASDLIKA 276



 Score = 37.2 bits (85), Expect = 4.1,   Method: Composition-based stats.
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD-DCQKAIGIVHFLDLL 336
           V+  M KN   +         + L+R+ +  VL VV  D ++ +G++   DL+
Sbjct: 3   VKRAMSKNVVSVSVPGNREKVLDLMRKEDKEVLPVVKGDTKQLVGLITRSDLI 55


>gi|197334914|ref|YP_002156336.1| CBS domain containing protein [Vibrio fischeri MJ11]
 gi|197316404|gb|ACH65851.1| CBS domain containing protein [Vibrio fischeri MJ11]
          Length = 138

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 49/109 (44%), Gaps = 7/109 (6%)

Query: 235 IGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVM 289
               L  A+   ++ +  G   VV+E +++ G I+E D+ ++     +   +T  V DVM
Sbjct: 19  ADMSLAAALDQFITSQHIGG-PVVNEQREVIGFISEQDLIKSLLGVSYHCQDTHVVADVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D  +    Q + ++   +  VV +  K +GI+   ++L+ 
Sbjct: 78  KTEVLTVTPDDAIVDLAQTMTENKPKIYPVV-EGGKLVGIITRRNVLQA 125



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    V+  M   P  +  D  L  A+ Q +   +I    VV++ ++ IG +   DL++
Sbjct: 1   MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGG-PVVNEQREVIGFISEQDLIK 58


>gi|329926227|ref|ZP_08280791.1| 6-phospho 3-hexuloisomerase [Paenibacillus sp. HGF5]
 gi|328939362|gb|EGG35717.1| 6-phospho 3-hexuloisomerase [Paenibacillus sp. HGF5]
          Length = 187

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/196 (21%), Positives = 76/196 (38%), Gaps = 19/196 (9%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M ++  Q A   I  E      L  S+Q   + Q    +E+I      V + G G+SG +
Sbjct: 1   MSHNIFQHA-SVIAKE------LSESVQQVDAGQIEELIERIVQSDA-VFLAGGGRSGLM 52

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
               A  L   G     V            I  +DL+++ S SG +  L ++   A+   
Sbjct: 53  IRAFAMRLMQMGFKVHIVGDTVTP-----AIGANDLLLIGSGSGETQGLVSMARKAKEIG 107

Query: 139 IPLIAITSENKSVVACHADIVLTLP----KEPESCPHGLAPTTSAIMQL--AIGDALAIA 192
             +  +T   +S +   +D ++ LP    ++ +     + P  S   Q    + DA+ + 
Sbjct: 108 SAVAVVTVRPESSIGKLSDAMVQLPGTTKEQNQDILVTVQPMASLFEQSMLIVLDAVILR 167

Query: 193 LLESRNFSENDFYVLH 208
           L+E      +  + LH
Sbjct: 168 LMEKSKLRSDQMFSLH 183


>gi|300864974|ref|ZP_07109806.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
 gi|300337030|emb|CBN54956.1| conserved hypothetical protein [Oscillatoria sp. PCC 6506]
          Length = 205

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/115 (20%), Positives = 47/115 (40%), Gaps = 6/115 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDIFR---NFHKDLN 281
               +  ++    + +A+ ++++     + V     Q   GI+TE DI      F KD  
Sbjct: 9   MTTEVVTIRGSATVAEAVAMMNDLCLRALIVERRHEQDAYGIVTETDIVYKVAAFGKDPA 68

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + V ++M K   V+  +  +    +L     I    V+ D    +GI+   D+L
Sbjct: 69  NVRVYEIMTKPCIVVNPELGVEYVARLFANTRIRRAPVIKDT--LVGIISITDIL 121



 Score = 39.9 bits (92), Expect = 0.58,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           +  ED+M      I     +  A+ ++    +  L+V     Q A GIV   D++
Sbjct: 3   MKAEDIMTTEVVTIRGSATVAEAVAMMNDLCLRALIVERRHEQDAYGIVTETDIV 57


>gi|300310430|ref|YP_003774522.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
 gi|300073215|gb|ADJ62614.1| transcription regulator protein [Herbaspirillum seropedicae SmR1]
          Length = 286

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/164 (16%), Positives = 60/164 (36%), Gaps = 4/164 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +++L              A++ + A   ++   G G SG + +        +G P+ 
Sbjct: 101 SRSINTLLDLRNHLNPDAIQLALD-VLARANKIEFYGQGTSGIVANDAQHKFFRSGVPTV 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
                        ++   D ++ +S  G +  L   +  AR+    +I +   + + +A 
Sbjct: 160 AYSDPHIHSIAASLLKAGDCVVAISQRGGNAALLRSIQLARKGGADIIVL-GPSGTPLAE 218

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            A +   +P +         P ++ +  L + D LA+ L   R 
Sbjct: 219 LATV--LVPIDLSFNIDPYTPISARLAHLVVIDILAVGLALRRG 260


>gi|307727184|ref|YP_003910397.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1003]
 gi|307587709|gb|ADN61106.1| CBS domain containing membrane protein [Burkholderia sp. CCGE1003]
          Length = 388

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 34/66 (51%)

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            F +  N L+ E++M ++   +   T    A  LL+++ +  L V+D  ++ +GIV   D
Sbjct: 232 AFSRSFNELTCENIMSRHVVSVSPTTRAVSAWALLKRNKVKALPVIDADRRLLGIVTRAD 291

Query: 335 LLRFGI 340
           L+   I
Sbjct: 292 LVDKRI 297



 Score = 61.1 bits (147), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 50/128 (39%), Gaps = 17/128 (13%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI--FRNFHK----- 278
               +  V      + A  +L   +   + V+D  ++L GI+T  D+   R F +     
Sbjct: 246 MSRHVVSVSPTTRAVSAWALLKRNKVKALPVIDADRRLLGIVTRADLVDKRIFGQFAPFM 305

Query: 279 ----------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                      L   +V +VM  + + +  +  +T  + +   +    + V+D     +G
Sbjct: 306 TYIDGWLRGDALRAPTVGNVMTTDVRTVKANAPITDLVPMFANYGHHHIPVLDATGHVVG 365

Query: 329 IVHFLDLL 336
           ++  +DL+
Sbjct: 366 MITQVDLI 373


>gi|164686271|ref|ZP_02210301.1| hypothetical protein CLOBAR_02709 [Clostridium bartlettii DSM
           16795]
 gi|164601873|gb|EDQ95338.1| hypothetical protein CLOBAR_02709 [Clostridium bartlettii DSM
           16795]
          Length = 211

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/127 (18%), Positives = 55/127 (43%), Gaps = 9/127 (7%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-- 278
             V        +VK    L D I  +     G + ++D+ + L G+++  D+ +      
Sbjct: 78  KQVGDIMGMPVVVKKDVSLYDVIVEMFLSDVGSIFIIDDEENLCGVVSRKDLLKATIGGL 137

Query: 279 DLNTLSVEDVMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQ-----KAIGIVH 331
           D+N + +  VM + P V+    D  + +A + + +H +  + V++  +     K +G + 
Sbjct: 138 DINKMPIGMVMTRTPNVVTAETDESVILAARKIIEHEVDSIPVIETDKERNITKVVGRIS 197

Query: 332 FLDLLRF 338
             ++ + 
Sbjct: 198 KTNITKL 204



 Score = 42.2 bits (98), Expect = 0.11,   Method: Composition-based stats.
 Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 1/63 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              D+    V D+M   P V+ +D  L   +  +   ++  + ++DD +   G+V   DL
Sbjct: 71  LGNDIKEKQVGDIMGM-PVVVKKDVSLYDVIVEMFLSDVGSIFIIDDEENLCGVVSRKDL 129

Query: 336 LRF 338
           L+ 
Sbjct: 130 LKA 132


>gi|117618836|ref|YP_856269.1| CBS domain-containing protein [Aeromonas hydrophila subsp.
           hydrophila ATCC 7966]
 gi|117560243|gb|ABK37191.1| CBS domains protein [Aeromonas hydrophila subsp. hydrophila ATCC
           7966]
          Length = 148

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/114 (20%), Positives = 48/114 (42%), Gaps = 13/114 (11%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL------------NT 282
               +  A+ ++ ++R   + +VDE   L G++T  DI       L            ++
Sbjct: 17  PENSVKQAMDLMQQERIRHIPIVDEQHHLLGLVTLSDILATRESKLLLINPEREAEFTDS 76

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           + ++++M +    +     +  A   L++H    L V+   +K IGIV   D +
Sbjct: 77  VQLDEIMTRQVASVDPHAGIKEAALYLQRHRYGCLPVL-KGRKLIGIVTESDFI 129



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 13/54 (24%), Positives = 31/54 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +++ ++M ++P  +  +  +  AM L++Q  I  + +VD+    +G+V   D+L
Sbjct: 2   MTLSEIMTEHPFTLGPENSVKQAMDLMQQERIRHIPIVDEQHHLLGLVTLSDIL 55


>gi|52548863|gb|AAU82712.1| conserved hypothetical protein [uncultured archaeon GZfos19C7]
          Length = 271

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/105 (20%), Positives = 44/105 (41%), Gaps = 5/105 (4%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK 291
              P+      +     G V +  E  K  GI+T+ DI        K  + +  +++M  
Sbjct: 154 EATPITKITKDMEVSGIGSVVITSED-KPVGIVTDRDIASKVIMKDKKASEIKAKEIMSS 212

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +  +    +LL ++NI  + V+ +  + +GI+   ++L
Sbjct: 213 PLITIAPEASVEKGCELLAENNIRRMPVM-ENNELVGIISVRNIL 256



 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/104 (21%), Positives = 44/104 (42%), Gaps = 4/104 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVMIKN 292
               +      +     G V +  E  K  GI+T+ DI       +    + V+++M   
Sbjct: 16  EDVSVTLISRDMDLSGIGSVVITKED-KPVGIVTDRDISIKICATRRTGKVKVKEIMSSP 74

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
              I  + L+  A +L+  ++I  L V+ + +  +GIV   ++L
Sbjct: 75  LITIAPEALVEEACELMAANDIRRLSVMRNDE-LVGIVSVRNIL 117



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 14/139 (10%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                          +  +     + +A  +++      ++V+    +L GI++  +I  
Sbjct: 60  RRTGKVKVKEIMSSPLITIAPEALVEEACELMAANDIRRLSVM-RNDELVGIVSVRNILT 118

Query: 275 NFHKDLNT------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
              + +              L V DVM        E T +T   + +    I  +++  +
Sbjct: 119 RAPEHVKKFYPAEGEVVAELLEVGDVMTLKVITEDEATPITKITKDMEVSGIGSVVITSE 178

Query: 323 CQKAIGIVHFLDLLRFGII 341
             K +GIV   D+    I+
Sbjct: 179 D-KPVGIVTDRDIASKVIM 196



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 15/53 (28%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           + VEDVM        ED  +T+  + +    I   +V+    K +GIV   D+
Sbjct: 1   MKVEDVMTPKVITEDEDVSVTLISRDMDLSGIGS-VVITKEDKPVGIVTDRDI 52


>gi|325968985|ref|YP_004245177.1| glutamine amidotransferase class-II [Vulcanisaeta moutnovskia
           768-28]
 gi|323708188|gb|ADY01675.1| glutamine amidotransferase class-II [Vulcanisaeta moutnovskia
           768-28]
          Length = 333

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/145 (20%), Positives = 56/145 (38%), Gaps = 1/145 (0%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG-TPSFFVHAAEASHGD 105
             L  ++      + +    ++ITG G S H        L +     +  + A E  +  
Sbjct: 8   NALQLEYLKDAALMISKARNIIITGSGTSYHAALIGRHYLRALADAKADVIPAGEFLYEG 67

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           L M+    LII +S SG S ++   +  A+R    ++ I +   S +   +++ L +   
Sbjct: 68  LDMVEPGTLIIAISQSGESADIIRAVRMAKRRGAAILGIINRLGSTLMRESNVYLPVSTG 127

Query: 166 PESCPHGLAPTTSAIMQLAIGDALA 190
           PE         T+ +  L    A+ 
Sbjct: 128 PEMAVPATKTFTATLSVLLQLSAVI 152


>gi|258651753|ref|YP_003200909.1| RpiR family transcriptional regulator [Nakamurella multipartita DSM
           44233]
 gi|258554978|gb|ACV77920.1| transcriptional regulator, RpiR family [Nakamurella multipartita
           DSM 44233]
          Length = 301

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/164 (21%), Positives = 57/164 (34%), Gaps = 2/164 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E+    +L  + Q         AV+ I+     +     G S              G   
Sbjct: 118 ERSSAEALRQTAQRLHPEALSAAVDLIENAS-VIAFVAQGLSSVAADAGVMRFIRAGRKC 176

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
              H           +T  D++I +S SG +D +   +  AR      IA+TS+  S + 
Sbjct: 177 LLFHDQSVQIMSATNLTAGDVVIGISDSGRTDAIVDTMRIARSHGAATIAVTSDADSPLV 236

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
             AD+ L     P    +G + T+    QL + DAL       R
Sbjct: 237 GVADVALFTATIPGGGLYGESVTSK-WGQLLVIDALYATFAARR 279


>gi|302546772|ref|ZP_07299114.1| putative CBS domain pair [Streptomyces hygroscopicus ATCC 53653]
 gi|302464390|gb|EFL27483.1| putative CBS domain pair [Streptomyces himastatinicus ATCC 53653]
          Length = 148

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/124 (20%), Positives = 52/124 (41%), Gaps = 2/124 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
             G  G   V  + V     + P V     +  A+ +++  R G + V D   +  G++T
Sbjct: 7   QPGPAGAKPVRRTVVEVMDAAGPQVCDDMSVEVALAVMAAARTGRLVVCDLDGQCTGLVT 66

Query: 269 EGDIF--RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKA 326
             ++   R+     + + + D++  +       T +  A   +R   + VL VVD+   A
Sbjct: 67  RTELAAVRDSSDYTDRVRLRDILGDHGSFTSPVTTMAEAEHAMRARRLGVLPVVDEQGSA 126

Query: 327 IGIV 330
           +GI+
Sbjct: 127 LGIL 130


>gi|300767243|ref|ZP_07077155.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|300495062|gb|EFK30218.1| ABC superfamily ATP binding cassette transporter, ABC protein
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 404

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/97 (26%), Positives = 49/97 (50%), Gaps = 3/97 (3%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK 294
            G  L  A+  + +KR   + V DE   LKG+I   D+  NF+   +  SV D+M  +  
Sbjct: 271 PGKSLTVALRQMHDKRVDSLLVTDEAGILKGVIGIEDVDYNFN---SATSVGDIMKTDLF 327

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            +  ++L+   ++ + +  +  + VVD+  + +GIV 
Sbjct: 328 YVQSNSLIRDTVERILKRGLKNIPVVDEQHRLVGIVT 364



 Score = 58.4 bits (140), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 34/202 (16%), Positives = 67/202 (33%), Gaps = 23/202 (11%)

Query: 148 NKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
            +  +   A  ++ L + PE          S   Q  IG   A+A  +     +  F  L
Sbjct: 114 PQDKMNERAKKMIKLVELPEDYLDRYPSELSGGQQQRIGVVRALAADQDLVLMDEPFGAL 173

Query: 208 HPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGII 267
            P              +        V +   + +A+ + +        V+ +G  +  + 
Sbjct: 174 DP--ITRESLQDLVKDLQERLGKTFVFVTHDMDEALKLATR------IVIMDGGDIMQVD 225

Query: 268 T-EGDIF--------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
           T +G +               R      +  +V  VM+K+P        LTVA++ +   
Sbjct: 226 TPDGILRHPANEFVENLIGKDRLIQARPSITTVGQVMLKDPIATTPGKSLTVALRQMHDK 285

Query: 313 NISVLMVVDDCQKAIGIVHFLD 334
            +  L+V D+     G++   D
Sbjct: 286 RVDSLLVTDEAGILKGVIGIED 307


>gi|187924781|ref|YP_001896423.1| RpiR family transcriptional regulator [Burkholderia phytofirmans
           PsJN]
 gi|187715975|gb|ACD17199.1| transcriptional regulator, RpiR family [Burkholderia phytofirmans
           PsJN]
          Length = 293

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/185 (20%), Positives = 66/185 (35%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A +  L  LE+ L      +F  AV+ ++     + + G+ +S  + S +   L
Sbjct: 117 AREFIAASRGALEELEAGLD---DKEFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 173 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 227 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|186476354|ref|YP_001857824.1| RpiR family transcriptional regulator [Burkholderia phymatum
           STM815]
 gi|184192813|gb|ACC70778.1| transcriptional regulator, RpiR family [Burkholderia phymatum
           STM815]
          Length = 293

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   + A + GL  LE SL      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 117 AREFVAACRDGLDELEGSLD---DAQFETAVKMLQQADN-IYVVGVRRSFPVASYIVYAL 172

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 173 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQA 226

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 227 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 279

Query: 199 FSEND 203
            +  +
Sbjct: 280 LNVEE 284


>gi|66820256|ref|XP_643761.1| CBS  domain-containing protein [Dictyostelium discoideum AX4]
 gi|60471915|gb|EAL69869.1| CBS  domain-containing protein [Dictyostelium discoideum AX4]
          Length = 304

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------S 284
           V+   PL   I ++++     + ++D    L  I+T+  +       +  +         
Sbjct: 111 VESTAPLKIGIDLMTKWGVHRLPIIDSEGTLISILTQSRVVEYIQNHIQNINGLDKAIGQ 170

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++    +   I +D ++  A +L+ ++ IS + VV+     IG +   D+
Sbjct: 171 LKEFGTSSVISIKQDRMVIDAFRLMHENGISAVPVVNQIGILIGNISVSDM 221



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 25/122 (20%), Positives = 45/122 (36%), Gaps = 17/122 (13%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD-----LNTLSVED 287
           +K    +IDA  ++ E     V VV++   L G I+  D  +    D        L +E 
Sbjct: 182 IKQDRMVIDAFRLMHENGISAVPVVNQIGILIGNISVSD-MKMVGYDGTLFSRMFLPIES 240

Query: 288 VMIKNPK-----------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +   PK            +L+ T +   +       +  L  VD   +   ++   DLL
Sbjct: 241 FLEMKPKNQNIDIFGKVLCVLDSTTIEEIITKFYISKVHRLYKVDLEGRPSAVISQGDLL 300

Query: 337 RF 338
           ++
Sbjct: 301 KY 302


>gi|313683572|ref|YP_004061310.1| diguanylate cyclase [Sulfuricurvum kujiense DSM 16994]
 gi|313156432|gb|ADR35110.1| diguanylate cyclase [Sulfuricurvum kujiense DSM 16994]
          Length = 445

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/104 (22%), Positives = 51/104 (49%), Gaps = 2/104 (1%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF-HKDLNTLSVEDVMIKN 292
               P+ D +  + +    CV ++ E +   GI+T  D+ +     +  T++V +VM   
Sbjct: 146 SPDTPMSDILEYMKDSLSDCV-IIQEDKHAIGILTSKDVIKFIGEGNCPTMAVSEVMSSP 204

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +++ E   ++  ++ LR  +   ++V +D  + +GIV   DL+
Sbjct: 205 VEMLSEKASISEGLEYLRNGHFKRIVVTNDDGQVVGIVTQQDLI 248



 Score = 44.1 bits (103), Expect = 0.030,   Method: Composition-based stats.
 Identities = 19/90 (21%), Positives = 45/90 (50%), Gaps = 5/90 (5%)

Query: 253 CVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNP--KVILEDTLLTVAMQL 308
            + V ++   L G++T  DI  +      L +L +  +  K    K    DT ++  ++ 
Sbjct: 98  HICVCNKDGSLYGLVTNSDIVASVDPQIILESLQISTIFEKKFGYKTFSPDTPMSDILEY 157

Query: 309 LRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++  ++S  +++ + + AIGI+   D+++F
Sbjct: 158 MKD-SLSDCVIIQEDKHAIGILTSKDVIKF 186



 Score = 40.3 bits (93), Expect = 0.43,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 44/106 (41%), Gaps = 6/106 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVMIK 291
           V +   + DA+  + +     V V+     L  IIT  D+ R        +  +  + ++
Sbjct: 17  VDMHHTVQDALDKMHQYNHRSVIVI--NNTLHYIITTKDVIRLKLEGVSFSTPLSQIPLR 74

Query: 292 NPKVILEDTLLTVAMQLLRQHNI-SVLMVVDDCQKAIGIVHFLDLL 336
              +I +++ +  A+ L   ++I   + V +      G+V   D++
Sbjct: 75  PLPLIDKESNIVNALNL--TNDIDEHICVCNKDGSLYGLVTNSDIV 118


>gi|306820635|ref|ZP_07454264.1| inosine-5'-monophosphate dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
 gi|304551366|gb|EFM39328.1| inosine-5'-monophosphate dehydrogenase [Eubacterium yurii subsp.
           margaretiae ATCC 43715]
          Length = 501

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 17/181 (9%)

Query: 155 HADIVLTLP-----KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHP 209
            A++ L  P     K          P  SAIMQ   GD LA+AL +    S   F     
Sbjct: 28  PANVNLKTPLIKFKKGEVCPITLNIPLVSAIMQSVSGDELAVALAKQGGIS---FIFCSQ 84

Query: 210 GGKLGTLFVCASDVMHSGDSIPL--VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLK 264
             +     V       +G       V     L D + +  +  F  VAV  +     KL 
Sbjct: 85  SIEDEVEMVRKVKTHKAGFVTSRANVSPDNTLQDILNLKEKTGFSTVAVTADGSPNGKLL 144

Query: 265 GIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI--LEDTLLTVAMQLLRQHNISVLMVVDD 322
           GI+T  D      +    + V + M    K+I   E   L  A  ++  + ++ L +VDD
Sbjct: 145 GIVTGRDYR--ISRMSTDMKVSEFMTPFEKLIYGKEGITLKEANNIIWDNKLNTLPIVDD 202

Query: 323 C 323
            
Sbjct: 203 N 203


>gi|288803621|ref|ZP_06409051.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella melaninogenica D18]
 gi|288333861|gb|EFC72306.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Prevotella melaninogenica D18]
          Length = 615

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 11/153 (7%)

Query: 58  EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDL 114
           +K+   K R++I   G S H   IG +L         P    +A+E  +G+  ++   D+
Sbjct: 294 DKLLNAK-RIIIVACGTSWHAGLIGKQLIEEYCR--IPVQVEYASEFRYGN-PVVGDSDV 349

Query: 115 IIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLA 174
           +I +S SG + +  A +  A+     +  I +   S +    D    +   PE    G+A
Sbjct: 350 VIAISQSGETADTLAAVELAKSKGAFIYGICNAIGSSIPRATDTGTYIHVGPE---IGVA 406

Query: 175 PTTSAIMQLAIGDALAIALLESRN-FSENDFYV 206
            T +   Q+ +    A+AL  ++   SE D+  
Sbjct: 407 STKAFTGQVTVLTMFALALANAKGTISEEDYKK 439


>gi|222479324|ref|YP_002565561.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
 gi|222452226|gb|ACM56491.1| putative signal transduction protein with CBS domains [Halorubrum
           lacusprofundi ATCC 49239]
          Length = 128

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 7/95 (7%)

Query: 246 LSEKRFGCVAVVDEGQKLKGIITEGD----IFRNFHKDLNTLSVEDVMIKNPKVILEDTL 301
           + E     + VVD+   L G+IT  D    + RN  +D     VE  M  +   +  D  
Sbjct: 30  MLETGVSSILVVDDDGHLAGLITATDFVSLVRRNDPED--ETPVEAFMTTDIVTVSPDDS 87

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   +        + L VV    K +GIV   DL 
Sbjct: 88  VEE-LAEPTDRGYTHLPVVTADSKLVGIVSTTDLT 121



 Score = 44.5 bits (104), Expect = 0.024,   Method: Composition-based stats.
 Identities = 11/57 (19%), Positives = 23/57 (40%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +  + +E +M      I        A   + +  +S ++VVDD     G++   D +
Sbjct: 1   MADIPIERLMSTELVTIDPGAAAADAANRMLETGVSSILVVDDDGHLAGLITATDFV 57


>gi|50287711|ref|XP_446285.1| hypothetical protein [Candida glabrata CBS 138]
 gi|49525592|emb|CAG59209.1| unnamed protein product [Candida glabrata]
          Length = 323

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/122 (21%), Positives = 52/122 (42%), Gaps = 9/122 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
           S  ++    +  P+ID I +L++     V + DE   L  +    D+       +     
Sbjct: 196 SEQNMKFCHMSTPVIDVIQLLTQAGVSSVPITDENGVLINVYEAYDVLGLIKGGIYNDLS 255

Query: 283 LSVED-VMIKN-----PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           LSV + +M ++          ++  L+  M  +R+  I    VVD+  +  G++   D+L
Sbjct: 256 LSVGEALMRRSDDFEGVYTCTKNDKLSSIMDNIRKSRIHRFFVVDENGRLTGVLTLSDIL 315

Query: 337 RF 338
           R+
Sbjct: 316 RY 317



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 27/140 (19%), Positives = 51/140 (36%), Gaps = 24/140 (17%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRN 275
             +         V    PL DA   + E R G + ++DE ++     +  ++T+  I + 
Sbjct: 115 KAIGVDQLDTAYVHPSRPLYDACLKMLESRSGRIPLIDEDEETHREIVVSVLTQYRILKF 174

Query: 276 F-----HKDLNTLSVEDV-------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                    L    + ++       M    K     T +   +QLL Q  +S + + D+ 
Sbjct: 175 VSLNCRETHLLQRPIGELGIISEQNM----KFCHMSTPVIDVIQLLTQAGVSSVPITDEN 230

Query: 324 QKAIGIVHFLD---LLRFGI 340
              I +    D   L++ GI
Sbjct: 231 GVLINVYEAYDVLGLIKGGI 250


>gi|16802180|ref|NP_463665.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes
           EGD-e]
 gi|217965775|ref|YP_002351453.1| inosine-5-monophosphate dehydrogenase (impdehydrogenase) (impdh)
           (impd) [Listeria monocytogenes HCC23]
 gi|224502944|ref|ZP_03671251.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-561]
 gi|226222771|ref|YP_002756878.1| inosine monophosphate dehydrogenase [Listeria monocytogenes
           Clip81459]
 gi|254825949|ref|ZP_05230950.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-194]
 gi|255028817|ref|ZP_05300768.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes LO28]
 gi|284803129|ref|YP_003414994.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           08-5578]
 gi|284996270|ref|YP_003418038.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           08-5923]
 gi|290892300|ref|ZP_06555295.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-071]
 gi|16409491|emb|CAC98347.1| lmo0132 [Listeria monocytogenes EGD-e]
 gi|217335045|gb|ACK40839.1| inosine-5-monophosphate dehydrogenase (impdehydrogenase) (impdh)
           (impd) [Listeria monocytogenes HCC23]
 gi|225875233|emb|CAS03927.1| Putative inosine monophosphate dehydrogenase [Listeria
           monocytogenes serotype 4b str. CLIP 80459]
 gi|284058691|gb|ADB69632.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           08-5578]
 gi|284061737|gb|ADB72676.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           08-5923]
 gi|290558126|gb|EFD91645.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-071]
 gi|293595188|gb|EFG02949.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-194]
 gi|307569680|emb|CAR82859.1| inosine-5-monophosphate dehydrogenase, putative [Listeria
           monocytogenes L99]
          Length = 502

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|288561249|ref|YP_003424735.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
 gi|288543959|gb|ADC47843.1| CBS domain-containing protein [Methanobrevibacter ruminantium M1]
          Length = 272

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/151 (23%), Positives = 55/151 (36%), Gaps = 17/151 (11%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
           +++DF  L         +   S        I  +     LI A  ++ +   G + +  E
Sbjct: 120 TKSDFIYLCKAKA----YEKVSVKDIMTPDIISISANDRLIHARKVIMDSGVGRLLLT-E 174

Query: 260 GQKLKGIITEGDIFRN------------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQ 307
             +L GIIT  DI +                 +  L   D M  N + I EDT +     
Sbjct: 175 DNELAGIITSKDIAKALVSFRKHTPEKHMASKIKELVAGDYMSTNVQTISEDTSIPELAD 234

Query: 308 LLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + +   +   VVD   + IGIV   DLL+ 
Sbjct: 235 AMLETGYNGYPVVDSNDQIIGIVTQSDLLKL 265



 Score = 61.5 bits (148), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD-IFRNFHKDLNTLSVEDVMIK 291
           V     L D   IL EK  G + V+    ++ GI+T+ D I+    K    +SV+D+M  
Sbjct: 86  VDADDDLTDVANILIEKNIGAIPVL-SDGEMVGIVTKSDFIYLCKAKAYEKVSVKDIMTP 144

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   I  +  L  A +++    +  L++  +  +  GI+   D+ + 
Sbjct: 145 DIISISANDRLIHARKVIMDSGVGRLLLT-EDNELAGIITSKDIAKA 190



 Score = 53.4 bits (127), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 10/113 (8%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVV--DEGQK-LKGIITEGDIFRNFHK------DLNTL 283
           +     + D + ++ +     + V   +E +K L GII+E DI              +  
Sbjct: 14  IDKNLNICDCLRMMYKDNLSRIPVTSTNENKKSLVGIISEKDIANKLGSVKYGNLAPSHF 73

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V  VM+K+   +  D  LT    +L + NI  + V+ D  + +GIV   D +
Sbjct: 74  HVSTVMVKDLITVDADDDLTDVANILIEKNIGAIPVLSD-GEMVGIVTKSDFI 125



 Score = 41.8 bits (97), Expect = 0.17,   Method: Composition-based stats.
 Identities = 10/73 (13%), Positives = 26/73 (35%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F    P   + +         +   ++  +     + +    + E  +    VVD   ++
Sbjct: 194 FRKHTPEKHMASKIKELVAGDYMSTNVQTISEDTSIPELADAMLETGYNGYPVVDSNDQI 253

Query: 264 KGIITEGDIFRNF 276
            GI+T+ D+ +  
Sbjct: 254 IGIVTQSDLLKLI 266



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 31/56 (55%), Gaps = 3/56 (5%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV---DDCQKAIGIVHFLDL 335
           + ++++M +N   I ++  +   ++++ + N+S + V    ++ +  +GI+   D+
Sbjct: 1   MKIKNIMSENVVSIDKNLNICDCLRMMYKDNLSRIPVTSTNENKKSLVGIISEKDI 56


>gi|152971847|ref|YP_001336956.1| putative regulator [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
 gi|150956696|gb|ABR78726.1| putative regulator [Klebsiella pneumoniae subsp. pneumoniae MGH
           78578]
          Length = 242

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHHCKVMSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|90422168|ref|YP_530538.1| CBS [Rhodopseudomonas palustris BisB18]
 gi|90104182|gb|ABD86219.1| CBS [Rhodopseudomonas palustris BisB18]
          Length = 332

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/140 (17%), Positives = 47/140 (33%), Gaps = 28/140 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------------ 273
               + +V       +   IL   R   + VVD      G+++E D+             
Sbjct: 7   MTTDVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLVGQHATDRVAKRE 66

Query: 274 RNFHK---------------DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           R                   D    +  ++M +    + E T +    +L+ +H I  + 
Sbjct: 67  RWLSHLAEGQPLAADFLQSVDPTNRTTAEIMHQPVIAVPETTPIAEVARLIAEHRIKRVF 126

Query: 319 VVDDCQKAIGIVHFLDLLRF 338
           V     + +G+V  +DL+R 
Sbjct: 127 VT-RGDRLVGVVSRIDLVRA 145



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/52 (28%), Positives = 24/52 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             DVM  +  V+  ++      ++L    +S L VVD     IG+V   DL+
Sbjct: 3   ARDVMTTDVSVVGPNSSSAEVARILLATRVSALPVVDHDGAPIGVVSEWDLV 54


>gi|332715607|ref|YP_004443073.1| iron transport system regulatory protein FitR [Agrobacterium sp.
           H13-3]
 gi|325062292|gb|ADY65982.1| iron transport system regulatory protein FitR [Agrobacterium sp.
           H13-3]
          Length = 298

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/169 (23%), Positives = 70/169 (41%), Gaps = 11/169 (6%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
            +  +K  L  L +    +       AV  +   +G + + GIG SG I +  A     +
Sbjct: 116 VLENQKNALEMLATVENRD---AMAAAVRLLAEARG-IGVLGIGASGIIATYAARLFQRS 171

Query: 90  GTPSFFVHAA-EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSEN 148
           G  S+ ++A        L  +    ++I+L    +  E +  +  A R  IP+I +  + 
Sbjct: 172 GVRSYALNATGITLAEQLLDLENGHVLIMLLHGRAHREAQTAIAEAGRIDIPIIMLLGQE 231

Query: 149 KSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            SV+  HA+  L LP+         AP+  A+        +A+AL  +R
Sbjct: 232 DSVLKKHANAYLLLPRAKNEGVALHAPSFIAMET------MALALSAAR 274


>gi|262402877|ref|ZP_06079438.1| putative acetoin utilization protein AcuB [Vibrio sp. RC586]
 gi|262351659|gb|EEZ00792.1| putative acetoin utilization protein AcuB [Vibrio sp. RC586]
          Length = 147

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 43/117 (36%), Gaps = 11/117 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
               +   +     L DA  ++       + VVD  +KL GI+++ D+       L    
Sbjct: 7   MMTRNPHTLLRTHTLNDAKHLMEALDIRHIPVVDANKKLLGIVSQRDLLAAQESSLQHST 66

Query: 282 -------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
                     + DVM  +   +     L  +   +++H I  L VV    + +GI+ 
Sbjct: 67  QITSYPLEAPLYDVMHTDVVSVAPQAGLKESAIYMQKHKIGCLPVV-AKGELVGIIT 122



 Score = 62.6 bits (151), Expect = 8e-08,   Method: Composition-based stats.
 Identities = 21/55 (38%), Positives = 29/55 (52%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M +NP  +L    L  A  L+   +I  + VVD  +K +GIV   DLL  
Sbjct: 3   KVEDMMTRNPHTLLRTHTLNDAKHLMEALDIRHIPVVDANKKLLGIVSQRDLLAA 57



 Score = 36.8 bits (84), Expect = 4.9,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +  V     L ++   + + + GC+ VV    +L GIIT+ D
Sbjct: 81  MHTDVVSVAPQAGLKESAIYMQKHKIGCLPVV-AKGELVGIITDSD 125


>gi|255022747|ref|ZP_05294733.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J1-208]
          Length = 502

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 66/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL +    S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALAKEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|189499096|ref|YP_001958566.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           phaeobacteroides BS1]
 gi|189494537|gb|ACE03085.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Chlorobium phaeobacteroides BS1]
          Length = 615

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 9/150 (6%)

Query: 61  KAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
             +  RV+I   G S H   IG  L    A    P    +A+E       +ITRDD++IV
Sbjct: 297 LKLSSRVIICACGTSWHAGLIGEYLIEEFAR--IPVEVDYASE-FRYRNPVITRDDVVIV 353

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG + +  A L  AR     ++ I +   S +A      +     PE    G+A T 
Sbjct: 354 ISQSGETADTLAALRLAREKGALVMGICNVVGSTIARETLCGIYTHAGPEV---GVASTK 410

Query: 178 SAIMQLAIGDALAIALLESRNFSENDFYVL 207
           +   Q+ +   LA+ L + R  S N+  + 
Sbjct: 411 AFTAQVTVLYLLALTLGKGRTMSRNELKLY 440


>gi|332520206|ref|ZP_08396670.1| CBS domain-containing protein [Lacinutrix algicola 5H-3-7-4]
 gi|332044765|gb|EGI80959.1| CBS domain-containing protein [Lacinutrix algicola 5H-3-7-4]
          Length = 157

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/111 (21%), Positives = 48/111 (43%), Gaps = 7/111 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
           K    + + ++ L + +     VV+E  +L GII+EGD        R ++  +   S+E 
Sbjct: 38  KATQSVEEVVSALIKHKISGGPVVNERNELIGIISEGDCIKQISDSRYYNMPMENDSIEK 97

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            M+ N + I  +  +  A +           +V +  K +G +   D+L+ 
Sbjct: 98  HMVTNVETIDGNLNVFDAAKQFLDSKRRRFPIV-EDGKLVGQISQKDILKA 147



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             V D M +          +   +  L +H IS   VV++  + IGI+   D ++
Sbjct: 24  FKVSDFMSRELITFKATQSVEEVVSALIKHKISGGPVVNERNELIGIISEGDCIK 78


>gi|315641460|ref|ZP_07896532.1| thioesterase [Enterococcus italicus DSM 15952]
 gi|315482748|gb|EFU73272.1| thioesterase [Enterococcus italicus DSM 15952]
          Length = 443

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/128 (22%), Positives = 55/128 (42%), Gaps = 4/128 (3%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             +    +  SD+    +    + I   +     I  E +     VV++  ++ GIIT  
Sbjct: 182 QLIKKDILLVSDIYMPLEKTHYLTISDTVAAYNRIAEETKHSRFPVVNKNMRVVGIITAK 241

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           DI     K+  T S+E +M K P+++ ++  +      +    + V+ VV D    IGIV
Sbjct: 242 DI---LGKN-ETQSIERLMTKEPRIVKKEMSVASVSHQMIWDGLEVMPVVADDLTLIGIV 297

Query: 331 HFLDLLRF 338
              D+++ 
Sbjct: 298 TRQDIMKA 305


>gi|302558517|ref|ZP_07310859.1| signal-transduction protein with CBS domains [Streptomyces
           griseoflavus Tu4000]
 gi|302476135|gb|EFL39228.1| signal-transduction protein with CBS domains [Streptomyces
           griseoflavus Tu4000]
          Length = 137

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/107 (22%), Positives = 41/107 (38%), Gaps = 3/107 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVEDVMI 290
           +     L  A  ++S +R G   V+D      GI+TE D+  +    +D +T        
Sbjct: 18  IGPAHTLRQAAALMSARRVGAAVVLDPDGTGIGILTERDVLNSVGLGQDPDTERAHAHTT 77

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +         L  A   +       L+V+D   +  GIV   D++R
Sbjct: 78  TDVVFAAPSWTLEEAAVAMTHGGFRHLIVLD-RGEPAGIVSVRDIIR 123



 Score = 41.4 bits (96), Expect = 0.21,   Method: Composition-based stats.
 Identities = 14/52 (26%), Positives = 20/52 (38%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V D M      I     L  A  L+    +   +V+D     IGI+   D+L
Sbjct: 7   VRDAMSTLVLTIGPAHTLRQAAALMSARRVGAAVVLDPDGTGIGILTERDVL 58


>gi|224498167|ref|ZP_03666516.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes
           Finland 1988]
          Length = 502

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|254827564|ref|ZP_05232251.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N3-165]
 gi|258599940|gb|EEW13265.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N3-165]
          Length = 502

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|83719350|ref|YP_443131.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|167582140|ref|ZP_02375014.1| CBS domain protein [Burkholderia thailandensis TXDOH]
 gi|167620299|ref|ZP_02388930.1| CBS domain protein [Burkholderia thailandensis Bt4]
 gi|257139361|ref|ZP_05587623.1| CBS domain-containing protein [Burkholderia thailandensis E264]
 gi|83653175|gb|ABC37238.1| CBS domain protein [Burkholderia thailandensis E264]
          Length = 154

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL  A+  ++E   G + VV E   L GI+T  +I      +   +  + V  VM
Sbjct: 17  VTPDTPLRSAVDTMAEHDIGSL-VVMEYGDLVGILTFREIILRLKANGGSVGDVLVRTVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDIDEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.5 bits (91), Expect = 0.76,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +GI+ F +++
Sbjct: 16  TVTPDTPLRSAVDTMAEHDIGSLVVM-EYGDLVGILTFREII 56


>gi|146312959|ref|YP_001178033.1| RpiR family transcriptional regulator [Enterobacter sp. 638]
 gi|145319835|gb|ABP61982.1| transcriptional regulator, RpiR family [Enterobacter sp. 638]
          Length = 243

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I + + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NEEFDSLLAQAVDIILSSE-RIIFVGAGTSGSLAKYGARFFSNIGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    ++ L IVLS SG ++E+          +  +++ITS   S +A  AD  L+   
Sbjct: 153 DM---AKNALAIVLSVSGETEEILRFASQFSLHNCKVLSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|150376555|ref|YP_001313151.1| CBS domain-containing protein [Sinorhizobium medicae WSM419]
 gi|150031102|gb|ABR63218.1| CBS domain containing protein [Sinorhizobium medicae WSM419]
          Length = 146

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/111 (20%), Positives = 45/111 (40%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               + L      +      ++E   G + V D   +L G+IT+ DI  R     ++   
Sbjct: 7   MTRDVHLASPNDTIAAIAREMAENDIGFMPVGDND-RLIGMITDRDIVVRGVADGVDPQA 65

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            V D+M  + K   +D  +    + +    +  L VV+  ++ +G+V   D
Sbjct: 66  RVADIMTTDVKYCFDDDDVDDVARNMGDIQVRRLPVVNHDKQLVGVVSLAD 116



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 30/58 (51%), Gaps = 1/58 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + V ++M ++  +   +  +    + + +++I  + V D+  + IG++   D++  G+
Sbjct: 1   MRVSEIMTRDVHLASPNDTIAAIAREMAENDIGFMPVGDND-RLIGMITDRDIVVRGV 57


>gi|46580259|ref|YP_011067.1| CBS domain-containing protein [Desulfovibrio vulgaris str.
           Hildenborough]
 gi|120602357|ref|YP_966757.1| signal transduction protein [Desulfovibrio vulgaris DP4]
 gi|46449676|gb|AAS96326.1| CBS domain protein [Desulfovibrio vulgaris str. Hildenborough]
 gi|120562586|gb|ABM28330.1| putative signal transduction protein with CBS domains
           [Desulfovibrio vulgaris DP4]
 gi|311233756|gb|ADP86610.1| CBS domain containing protein [Desulfovibrio vulgaris RCH1]
          Length = 142

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 45/117 (38%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----------- 282
           K    L DA +++   R   + +VD      G++T  DI                     
Sbjct: 16  KRSDSLRDARSLMQLARIRHIPIVDGRGGFVGLLTHRDILSATISRFADVDEHIQGEIDA 75

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + V ++M  +   +    +L  A ++L  +    L V+ + ++ +GIV   D L+ 
Sbjct: 76  GIPVGEIMQTDVVTVPPSMMLRDAAEILLHNKYGCLPVL-EGERLVGIVTEADFLKL 131



 Score = 47.2 bits (111), Expect = 0.004,   Method: Composition-based stats.
 Identities = 12/54 (22%), Positives = 23/54 (42%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + D+M  N   +     L  A  L++   I  + +VD     +G++   D+L  
Sbjct: 4   IADLMTTNLFTLKRSDSLRDARSLMQLARIRHIPIVDGRGGFVGLLTHRDILSA 57


>gi|66815599|ref|XP_641816.1| hypothetical protein DDB_G0279363 [Dictyostelium discoideum AX4]
 gi|60469843|gb|EAL67830.1| hypothetical protein DDB_G0279363 [Dictyostelium discoideum AX4]
          Length = 171

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/138 (21%), Positives = 56/138 (40%), Gaps = 16/138 (11%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGD 271
                  D+M   D +  +K    L   + ++  +    + V+++     KL G++T+ D
Sbjct: 14  QYNPRVEDIMTKCDKVVSIKPTDTLKHCLEVMLLEGHKRLPVIEQKGDKMKLLGVVTDKD 73

Query: 272 IF-----------RNFHKDLNTLSVEDVM--IKNPKVILEDTLLTVAMQLLRQHNISVLM 318
           I            ++    L +  V D++      K       +T A + +   +IS L 
Sbjct: 74  IRVYSKSYFEHNLKDILDSLESYKVSDILPDATFFKKAHVGEKITQASKEMLHLHISGLP 133

Query: 319 VVDDCQKAIGIVHFLDLL 336
           VVD+ ++  GI+   DLL
Sbjct: 134 VVDEDEQLKGIITRSDLL 151



 Score = 40.3 bits (93), Expect = 0.49,   Method: Composition-based stats.
 Identities = 18/82 (21%), Positives = 31/82 (37%)

Query: 197 RNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAV 256
           R +S++ F                SD++          +G  +  A   +       + V
Sbjct: 75  RVYSKSYFEHNLKDILDSLESYKVSDILPDATFFKKAHVGEKITQASKEMLHLHISGLPV 134

Query: 257 VDEGQKLKGIITEGDIFRNFHK 278
           VDE ++LKGIIT  D+     +
Sbjct: 135 VDEDEQLKGIITRSDLLDQLIR 156


>gi|258652607|ref|YP_003201763.1| CBS domain containing protein [Nakamurella multipartita DSM 44233]
 gi|258555832|gb|ACV78774.1| CBS domain containing protein [Nakamurella multipartita DSM 44233]
          Length = 143

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 52/126 (41%), Gaps = 5/126 (3%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T             S+  +  G     A+  L   + G V ++D+ +++ G+++E D+ 
Sbjct: 5   RTAQPTDPVTRIMTTSVATIDAGASWAQALAELVGNQIGAVVLIDDNERI-GLVSERDLI 63

Query: 274 RNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
               +   DL T  VE++   +      DT +  A  ++    I  L V D   + +G++
Sbjct: 64  YALAQGEVDLQTRQVEEIATFDLIWAPADTSIAQAGSMMVDAEIRHLPVGD-GHEVLGMI 122

Query: 331 HFLDLL 336
              D+L
Sbjct: 123 SARDVL 128


>gi|75909331|ref|YP_323627.1| voltage gated Cl- channel protein [Anabaena variabilis ATCC 29413]
 gi|75703056|gb|ABA22732.1| Cl- channel, voltage gated [Anabaena variabilis ATCC 29413]
          Length = 596

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/117 (18%), Positives = 44/117 (37%), Gaps = 15/117 (12%)

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF------------ 276
               +     +++A   +   R     V+D+ ++L GII+  D+ R              
Sbjct: 445 CPKKLPATLGILEAAREMISDRTRSALVIDDAEQLVGIISLEDLNRTLSLWQNYPNSASE 504

Query: 277 -HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGIV 330
              +L   S+ D+  K       D  L+ A+  +    +  L VV  D+    +G++
Sbjct: 505 IQSNLTNQSIIDICTKEILYAWRDEPLSEALDRMEVRGLHQLPVVARDNHDHILGLL 561



 Score = 42.6 bits (99), Expect = 0.096,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L  + VED M+  PK +     +  A + +        +V+DD ++ +GI+   DL R
Sbjct: 433 LQQILVEDAMLACPKKLPATLGILEAAREMISDRTRSALVIDDAEQLVGIISLEDLNR 490


>gi|306815125|ref|ZP_07449278.1| hypothetical protein ECNC101_00928 [Escherichia coli NC101]
 gi|331649661|ref|ZP_08350743.1| putative transcriptional regulator [Escherichia coli M605]
 gi|281180883|dbj|BAI57213.1| conserved hypothetical protein [Escherichia coli SE15]
 gi|305851494|gb|EFM51948.1| hypothetical protein ECNC101_00928 [Escherichia coli NC101]
 gi|330908137|gb|EGH36656.1| sialic acid utilization regulator, RpiR family [Escherichia coli
           AA86]
 gi|331041531|gb|EGI13679.1| putative transcriptional regulator [Escherichia coli M605]
          Length = 281

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 6/209 (2%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQ--CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           H   +  K V    +S  +N+      +L + + +K+    L  S Q   +      ++ 
Sbjct: 68  HLKIALAKEVINPDNSYPENTDFSDITSLATFLLKKQA-EDLIQSTQFFNADVLESILKL 126

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +      +     G S  +    A   +  G  +    + E        + + DL I +S
Sbjct: 127 LANCDT-IFFFAAGNSNPLAVYSAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDLAIGIS 185

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SGS++ +  I    +      + IT+  KS ++  +   L             A  ++ 
Sbjct: 186 NSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAV--SDKIFFEAFDSTR 243

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLH 208
           +  + + D L +  +         +    
Sbjct: 244 VPAMGVIDMLVLLFMYKNKAHYEKYRTRE 272


>gi|295677089|ref|YP_003605613.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1002]
 gi|295436932|gb|ADG16102.1| transcriptional regulator, RpiR family [Burkholderia sp. CCGE1002]
          Length = 294

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 118 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 173

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 174 QHTHKR------VHLVSGFGGMYREQIRSVRKGDVVIAISFAPYGKETQYCLRVAHHHQA 227

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 228 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 280

Query: 199 FSEND 203
            +  +
Sbjct: 281 LNVEE 285


>gi|262042542|ref|ZP_06015699.1| RpiR family phosphosugar-binding transcriptional regulator
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
 gi|259040102|gb|EEW41216.1| RpiR family phosphosugar-binding transcriptional regulator
           [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC
           13884]
          Length = 242

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHHCKVMSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|218680860|ref|ZP_03528757.1| putative HTH-type transcriptional regulator [Rhizobium etli CIAT
           894]
          Length = 287

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/177 (22%), Positives = 61/177 (34%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
                  A   I   +  L  L  SL          AV  I            G S  I 
Sbjct: 87  STDPADVAQDIITKAQNALFLLHRSLD---LAAIEAAVSHIAKADMIYAFGSGGNSSMIA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
            +L + L   G                      D++I  S+SG + EL      AR   +
Sbjct: 144 DELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFSGRNLELVRAFELARDTKV 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             IA+T + +S VA  A+IV+ +     +  +   PT++ I  +A  D L+  +  +
Sbjct: 204 KTIALT-QTESPVAKAAEIVVPIDLPEGNNIYR--PTSTRIAYIATVDILSSLVAYA 257


>gi|126665485|ref|ZP_01736467.1| CBS domain protein [Marinobacter sp. ELB17]
 gi|126630113|gb|EBA00729.1| CBS domain protein [Marinobacter sp. ELB17]
          Length = 166

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 5/110 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLN 281
             + I  ++ G PL   +  L E     + VVD  ++L G ++E D         +    
Sbjct: 33  MSNHIAPIRCGTPLTKVVKALLENHISGLPVVDASRRLLGFVSEQDCIHALLVSNYHCEG 92

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              V+DVM + P  I   T +    Q L      V  VVD   K +GIV 
Sbjct: 93  DPIVDDVMFREPLSISPGTSIVDLAQKLGAGKPKVYPVVD-QGKLVGIVT 141



 Score = 49.1 bits (116), Expect = 9e-04,   Method: Composition-based stats.
 Identities = 19/57 (33%), Positives = 29/57 (50%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            L V DVM  +   I   T LT  ++ L +++IS L VVD  ++ +G V   D +  
Sbjct: 26  ALRVSDVMSNHIAPIRCGTPLTKVVKALLENHISGLPVVDASRRLLGFVSEQDCIHA 82


>gi|41582343|gb|AAS07957.1| CBS domain protein [uncultured marine bacterium 463]
          Length = 133

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/128 (23%), Positives = 48/128 (37%), Gaps = 6/128 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN 275
           +    S   +       VK    +++A+ I+ + +   + VVD+   L GI++E D  R 
Sbjct: 1   MLHSVSLRDYMLPHPVKVKADANMLEAMQIIIDNKISGLCVVDDTNNLVGILSELDCLRA 60

Query: 276 -FHKDLNTLSV----EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 N  SV    E +   N  V   D  +    Q +   N     VV +  K IG +
Sbjct: 61  VLSATYNKTSVGPVREHMASDNLVVAHPDEDIVDIAQDMLTKNKRRRPVV-ENGKLIGQI 119

Query: 331 HFLDLLRF 338
               LL  
Sbjct: 120 TCRQLLTA 127


>gi|319776798|ref|YP_004136449.1| transcriptional regulator, rpir family [Mycoplasma fermentans M64]
 gi|318037873|gb|ADV34072.1| Transcriptional regulator, RpiR family [Mycoplasma fermentans M64]
          Length = 288

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 5/157 (3%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++++    +L    + A E I   K  + I G G S  I   L S L   G P       
Sbjct: 110 AIDNVYDEDLLKDINKAAEIINKSKN-IYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDF 168

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L  +T +D++IV S +  + E   ++  A++   P+I +T    S       I 
Sbjct: 169 HIFFPSLAHVTENDVVIVYSNNLQTMEAHFVIEQAKKQKAPIIVLT----SSQEEDKLIA 224

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L          L P++S I Q+ I D L  A+LE 
Sbjct: 225 VKLRYHKIQSSTMLVPSSSKIAQMLITDLLFEAVLEH 261


>gi|306825258|ref|ZP_07458600.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432694|gb|EFM35668.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 240

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
           Q         AV  +K ++ ++V  GIG SG +G   A   ++ G   F +   +     
Sbjct: 93  QDTFLQLIMEAVAILKNVE-QIVFVGIGSSGTLGRYGARYFSNIGK--FSMCIEDPWQPV 149

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           L        +I LS SG + +   I+   +    P+IAIT+  +S ++  +D  +T    
Sbjct: 150 LQNSMEKTCVIALSESGETSQTLKIVQKLKEKGCPVIAITNTLESTLSRLSDCSITYHVP 209

Query: 166 P 166
            
Sbjct: 210 Q 210


>gi|269467858|gb|EEZ79601.1| IMP dehydrogenase/GMP reductase [uncultured SUP05 cluster
           bacterium]
          Length = 486

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/169 (19%), Positives = 67/169 (39%), Gaps = 11/169 (6%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SA M       LAI + +         +  V     ++  +    S ++      
Sbjct: 40  NTPILSAAMDTVTEAKLAITMAQEGGIGIIHKNMSVKEQANEVRKVKRFESGIIR---EP 96

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             +     + D   +  + +   + VV +G  + G+IT  D+   F   ++ L VE++M 
Sbjct: 97  ITIDPKATIADVFDMQQKFKISALPVV-KGNTIVGMITGRDVR--FETRMDEL-VENLMT 152

Query: 291 KNPK--VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              K   ++E T ++    LL QH I  +++ +D     G++   D+ +
Sbjct: 153 PQNKLITVIEGTDMSEVRSLLHQHRIERVVITNDKFDLQGMITVRDIQK 201


>gi|218191476|gb|EEC73903.1| hypothetical protein OsI_08728 [Oryza sativa Indica Group]
          Length = 783

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 31/131 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------FHK 278
           +     + +A+ +L +K+  C  VVD    L+GI+T GDI R                  
Sbjct: 622 IPTSAMVTEALKLLHDKQQNCGLVVDCEDFLEGIVTLGDIRRMGFELHGDSFTSGDQLKP 681

Query: 279 DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMVV--------D 321
             N+ ++   + +                DT LT A  L+    I  L VV        +
Sbjct: 682 AENSSTISLCLTRGFQYEGNERGLLTCFPDTDLTTAKNLMEARGIKQLPVVKRGVGHRTE 741

Query: 322 DCQKAIGIVHF 332
             +K I ++H+
Sbjct: 742 GKRKLIALLHY 752



 Score = 48.7 bits (115), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K+   I    ++T A++LL     +  +VVD      GIV   D+ R G
Sbjct: 606 LDDLKVSQAMSKSYVKIPTSAMVTEALKLLHDKQQNCGLVVDCEDFLEGIVTLGDIRRMG 665


>gi|115448351|ref|NP_001047955.1| Os02g0720700 [Oryza sativa Japonica Group]
 gi|45735842|dbj|BAD12877.1| putative chloride channel protein [Oryza sativa Japonica Group]
 gi|45735968|dbj|BAD12997.1| putative chloride channel protein [Oryza sativa Japonica Group]
 gi|113537486|dbj|BAF09869.1| Os02g0720700 [Oryza sativa Japonica Group]
 gi|222623567|gb|EEE57699.1| hypothetical protein OsJ_08177 [Oryza sativa Japonica Group]
          Length = 783

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/131 (22%), Positives = 49/131 (37%), Gaps = 31/131 (23%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------------FHK 278
           +     + +A+ +L +K+  C  VVD    L+GI+T GDI R                  
Sbjct: 622 IPTSAMVTEALKLLHDKQQNCGLVVDCEDFLEGIVTLGDIRRMGFELHGDSFTSGDQLKP 681

Query: 279 DLNTLSVEDVMIKNP---------KVILEDTLLTVAMQLLRQHNISVLMVV--------D 321
             N+ ++   + +                DT LT A  L+    I  L VV        +
Sbjct: 682 AENSSTISLCLTRGFQYEGNERGLLTCFPDTDLTTAKNLMEARGIKQLPVVKRGVGHRTE 741

Query: 322 DCQKAIGIVHF 332
             +K I ++H+
Sbjct: 742 GKRKLIALLHY 752



 Score = 48.4 bits (114), Expect = 0.001,   Method: Composition-based stats.
 Identities = 19/60 (31%), Positives = 28/60 (46%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L+ L V   M K+   I    ++T A++LL     +  +VVD      GIV   D+ R G
Sbjct: 606 LDDLKVSQAMSKSYVKIPTSAMVTEALKLLHDKQQNCGLVVDCEDFLEGIVTLGDIRRMG 665


>gi|107026336|ref|YP_623847.1| CBS domain-containing protein [Burkholderia cenocepacia AU 1054]
 gi|116692476|ref|YP_838009.1| CBS domain-containing protein [Burkholderia cenocepacia HI2424]
 gi|105895710|gb|ABF78874.1| CBS domain containing membrane protein [Burkholderia cenocepacia AU
           1054]
 gi|116650476|gb|ABK11116.1| CBS domain containing membrane protein [Burkholderia cenocepacia
           HI2424]
          Length = 143

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 46/117 (39%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D G +L  I+T+ D+  R   H      
Sbjct: 8   MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-GTELVAIVTDRDLAVRALSHGHSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V  +  +  +ED  +    Q +    +  L V+D   K +G+V   D+  R G
Sbjct: 67  PVQAVASRPVQWCIEDDGVGDVQQRMADVQLHRLPVLDRSLKLVGMVSLGDIATRAG 123



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A +L+++ +I VL V D  +  + IV   DL
Sbjct: 4   VNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDGTE-LVAIVTDRDL 53


>gi|239932448|ref|ZP_04689401.1| inositol-5-monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 480

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 4/130 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   +  +           D+  ++     + DA+ +L ++      VVD+G K  G++T
Sbjct: 78  PIEVVTEVVSWVKSRHLVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDDGHKPVGVVT 137

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + D+            + +VM ++  +I  D     A   L   N      VD   +  G
Sbjct: 138 DTDL----SGVDRFTQLTEVMSRDLLLIDADMDPREAFNTLDAANRRYAPAVDSDGRLAG 193

Query: 329 IVHFLDLLRF 338
           I+     LR 
Sbjct: 194 ILTRKGALRA 203


>gi|228993404|ref|ZP_04153320.1| Acetoin utilization protein AcuB [Bacillus pseudomycoides DSM
           12442]
 gi|228999449|ref|ZP_04159028.1| Acetoin utilization protein AcuB [Bacillus mycoides Rock3-17]
 gi|229007005|ref|ZP_04164633.1| Acetoin utilization protein AcuB [Bacillus mycoides Rock1-4]
 gi|228754244|gb|EEM03661.1| Acetoin utilization protein AcuB [Bacillus mycoides Rock1-4]
 gi|228760394|gb|EEM09361.1| Acetoin utilization protein AcuB [Bacillus mycoides Rock3-17]
 gi|228766472|gb|EEM15115.1| Acetoin utilization protein AcuB [Bacillus pseudomycoides DSM
           12442]
          Length = 214

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 18/117 (15%), Positives = 38/117 (32%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------FHKDLNTLSV 285
                +  AI  +  K    + +V     + GII++ D+              D+    +
Sbjct: 15  HPDDTIETAIRTIRTKGIRHIPIVGHNNNVVGIISDRDVRDASPSILDEQVSMDMLKQPI 74

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH----FLDLLRF 338
           + +M +          +     L  ++ I  L V     K +GI+        L++ 
Sbjct: 75  QLIMKQPVMTCHPLDFVEEIATLFFENKIGCLPVT-KGGKLVGIISESTVLHTLVKL 130



 Score = 43.7 bits (102), Expect = 0.039,   Method: Composition-based stats.
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           VE++M  +   +  D  +  A++ +R   I  + +V      +GI+   D
Sbjct: 3   VEEIMNHDVIALHPDDTIETAIRTIRTKGIRHIPIVGHNNNVVGIISDRD 52


>gi|167759611|ref|ZP_02431738.1| hypothetical protein CLOSCI_01969 [Clostridium scindens ATCC 35704]
 gi|167662737|gb|EDS06867.1| hypothetical protein CLOSCI_01969 [Clostridium scindens ATCC 35704]
          Length = 189

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 35/186 (18%), Positives = 66/186 (35%), Gaps = 19/186 (10%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           +++ E R +       + +   +    +E+I+  + R+ + G+G+ G  G   A  L   
Sbjct: 12  TVLNEHREV------FEKQDLDEVTLFMEQIRKAE-RIFVMGVGREGIAGRSFAMRLMHL 64

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G    ++          GM    DL I ++ SG    +  ++  A+     +  +T   K
Sbjct: 65  GKEVHWIWDDTTP----GM-HEGDLFIAINGSGKIGHIHYVVKQAKETGAAITVVTGGPK 119

Query: 150 SVVACHADIVLTLPKEPESCPHGLA-----PTTSAIMQLAIG--DALAIALLESRNFSEN 202
              A  AD VL +P    +     A     P  +   Q      D + + L E    +  
Sbjct: 120 EKTARLADCVLFVPASVFNGTDSRAVPSVQPMGNLFEQHLFLLFDIIIMLLEEEMKVTHE 179

Query: 203 DFYVLH 208
                H
Sbjct: 180 QMEARH 185


>gi|145596995|ref|YP_001161292.1| CBS domain-containing protein [Salinispora tropica CNB-440]
 gi|145306332|gb|ABP56914.1| CBS domain containing protein [Salinispora tropica CNB-440]
          Length = 129

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 45/108 (41%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           +V     L  A  ++SE+  G   V+D   +  GI+TE D+     +  D +       +
Sbjct: 13  VVGPEHTLRQAARMMSERGIGSAVVIDPDSEGVGIMTERDLLNAIGRGLDCDVERTGAHL 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +      +  +  A   + +     L+V+D  ++  G++   D++R
Sbjct: 73  TWDVVYAGPEWTVEEAATAMARGGFRHLVVLD-GREVAGVISLRDVVR 119



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 27/56 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V +VM     V+  +  L  A +++ +  I   +V+D   + +GI+   DLL  
Sbjct: 1   MQVREVMSSQVLVVGPEHTLRQAARMMSERGIGSAVVIDPDSEGVGIMTERDLLNA 56


>gi|189345645|ref|YP_001942174.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobium
           limicola DSM 245]
 gi|189339792|gb|ACD89195.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Chlorobium limicola DSM 245]
          Length = 614

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/154 (25%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           +E ++  K R++I   G S H   IG  L    A    P    +A+E       +IT +D
Sbjct: 293 LEHLRKAK-RIIICACGTSWHAGLIGEYLIEEFAR--IPVEVDYASE-FRYRNPVITPED 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     ++ I +   S +A      +     PE    G+
Sbjct: 349 VVIVISQSGETADTLAALREAKEKGALVMGICNVVGSTIARETHCGMYTHAGPE---IGV 405

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           A T +   Q+ +   +A+AL + R  S+++  + 
Sbjct: 406 ASTKAFTAQVIVLYMVALALSQGRTLSDSEIALY 439


>gi|291440813|ref|ZP_06580203.1| inositol-5-monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
 gi|291343708|gb|EFE70664.1| inositol-5-monophosphate dehydrogenase [Streptomyces ghanaensis
           ATCC 14672]
          Length = 483

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/130 (20%), Positives = 48/130 (36%), Gaps = 4/130 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   +  +           D+  ++     + DA+ +L ++      VVD+G K  G++T
Sbjct: 81  PIEVVTEVVSWVKSRHLVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDDGHKPVGVVT 140

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + D+            + +VM ++  +I  D     A   L   N      VD   +  G
Sbjct: 141 DTDL----SGVDRFTQLTEVMSRDLLLIDADMDPREAFNTLDAANRRYAPAVDSDGRLAG 196

Query: 329 IVHFLDLLRF 338
           I+     LR 
Sbjct: 197 ILTRKGALRA 206


>gi|210615500|ref|ZP_03290627.1| hypothetical protein CLONEX_02843 [Clostridium nexile DSM 1787]
 gi|210150349|gb|EEA81358.1| hypothetical protein CLONEX_02843 [Clostridium nexile DSM 1787]
          Length = 237

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/140 (21%), Positives = 62/140 (44%), Gaps = 7/140 (5%)

Query: 32  IAEKRGLSSLESSLQGELSFQFH----CAVEKIKAIKGRVVITGIGKSGHIGSKLASTLA 87
           I  +  LS L    QG  +  F      AV+ ++  + +V++ G+G SG +    A   +
Sbjct: 76  IQPQNDLSELLHYFQGVHTSAFEEQISRAVDMVRGAQ-QVILIGVGSSGTLARYGARYFS 134

Query: 88  STGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSE 147
           + G  S ++            I  D ++I LS SG + +   +    +R    +++IT++
Sbjct: 135 NVGKFSQYIDDPYYPISRDTYI--DTVVIALSESGETRQTIEMTESFKRHQCKILSITNK 192

Query: 148 NKSVVACHADIVLTLPKEPE 167
           + S ++  +D+ L+      
Sbjct: 193 DSSTLSKISDMNLSYFVTER 212


>gi|332664585|ref|YP_004447373.1| glucosamine--fructose-6-phosphate aminotransferase
           [Haliscomenobacter hydrossis DSM 1100]
 gi|332333399|gb|AEE50500.1| Glucosamine--fructose-6-phosphate aminotransferase (isomerizing)
           [Haliscomenobacter hydrossis DSM 1100]
          Length = 612

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 10/151 (6%)

Query: 59  KIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLI 115
           KI   K R V+ G G S H   IG  L   LA    P    +A+E       +I+  D++
Sbjct: 292 KISKAK-RFVMIGCGTSWHAGLIGEYLFEDLAR--IPVEVEYASE-FRYRNPVISEKDVV 347

Query: 116 IVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAP 175
           I +S SG + +  A L  A+     L  + +   S +A        +   PE    G+A 
Sbjct: 348 IAISQSGETADTLAALEIAKEKGAFLYGVVNSVGSSIARTTHAGSYIHAGPE---IGVAS 404

Query: 176 TTSAIMQLAIGDALAIALLESRNFSENDFYV 206
           T +   Q+ +   +A+ L   R      +Y 
Sbjct: 405 TKAFTGQVTLLTLMALYLAHHRGTISEQYYR 435


>gi|327192612|gb|EGE59556.1| transcriptional regulator [Rhizobium etli CNPAF512]
          Length = 287

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 41/195 (21%), Positives = 66/195 (33%), Gaps = 12/195 (6%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIK 61
           H    + K  ++             A   I   +  L  L  SL          AV  I 
Sbjct: 75  HIGVRYLKPESKSTEPA------DVAQDIITKAQNALFLLHRSLD---LAAIEAAVAHIA 125

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
                      G S  I  +L + L   G                      D++I  S+S
Sbjct: 126 KADMIYAFGSGGNSSMIADELQNRLFRLGLRITASSDHSMQLMMAAAARPGDVLIGSSFS 185

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G + EL      AR+  +  IA+T +  S VA  A+IV+ +     +  +   PT++ I 
Sbjct: 186 GRNMELVRAFDLARQAKVKTIALT-QTDSPVAKAAEIVVPIDLPEGNNIYR--PTSTRIA 242

Query: 182 QLAIGDALAIALLES 196
            +A  D L+  +  +
Sbjct: 243 YIATVDILSSLVAYA 257


>gi|262384813|ref|ZP_06077945.1| inositol-5-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
 gi|262293529|gb|EEY81465.1| inositol-5-monophosphate dehydrogenase [Bacteroides sp. 2_1_33B]
          Length = 497

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 63/167 (37%), Gaps = 10/167 (5%)

Query: 166 PESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
            +S      P  SAIMQ   G  LAI L  +RN   +  +   P      +         
Sbjct: 44  EKSAIELNIPFVSAIMQSVSGPKLAIEL--ARNGGLSFIFGSQPIESQADMVRKVKKFKA 101

Query: 226 SGDSIPL-VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLN 281
                   +     L D + ++       + V D+     KL G++T  D      KD  
Sbjct: 102 GFVISDSNLTPENTLADVLELVRRTEHSTIGVTDDGTPNGKLLGMVTSRDYRE--GKDPI 159

Query: 282 TLSVEDVMIKNPKVILED--TLLTVAMQLLRQHNISVLMVVDDCQKA 326
            + V+D M    K+I+ +    L  A Q++  H ++ L ++D  QK 
Sbjct: 160 DMKVKDFMTPFTKLIVGELGMTLKEANQIIWDHKLNTLPIIDKDQKL 206


>gi|225850392|ref|YP_002730626.1| putative nucleotidyltransferase family [Persephonella marina EX-H1]
 gi|225645372|gb|ACO03558.1| putative nucleotidyltransferase family [Persephonella marina EX-H1]
          Length = 601

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 5/112 (4%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHK--DLNTLS 284
                      +      +S     C  V  E   +KGIIT+ D+  R   K  D + + 
Sbjct: 149 RPAVFCDEEDSVTQVAKKMSSADTSCCLVGREDS-IKGIITDKDLKDRVLAKGHDPSKIK 207

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
             D+     + I  D  L  A+  + + NI  L V+++  K IG+V   D+L
Sbjct: 208 ASDIKTYPVEFIESDRFLFEAVLKMIRKNIKRLPVLEE-GKVIGVVEDRDIL 258


>gi|156743751|ref|YP_001433880.1| CBS domain-containing protein [Roseiflexus castenholzii DSM 13941]
 gi|156235079|gb|ABU59862.1| CBS domain containing membrane protein [Roseiflexus castenholzii
           DSM 13941]
          Length = 139

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 12/105 (11%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR----------- 274
                  +     L +A  ++  +R   + V+D   +L GI+TEGDI R           
Sbjct: 1   MSRPPICISESTTLPEARRLMQRRRVRRLPVLDSDGRLAGIVTEGDINRISDSQVHDMRQ 60

Query: 275 -NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
            N +  +  L V D M +    +  D  +    QLL +H I  + 
Sbjct: 61  YNLYHRVVDLPVRDFMTRTVITVGPDEPVIAVAQLLLRHRIGGVP 105



 Score = 38.7 bits (89), Expect = 1.3,   Method: Composition-based stats.
 Identities = 16/50 (32%), Positives = 25/50 (50%)

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           M + P  I E T L  A +L+++  +  L V+D   +  GIV   D+ R 
Sbjct: 1   MSRPPICISESTTLPEARRLMQRRRVRRLPVLDSDGRLAGIVTEGDINRI 50


>gi|145595503|ref|YP_001159800.1| sugar isomerase (SIS) [Salinispora tropica CNB-440]
 gi|145304840|gb|ABP55422.1| sugar isomerase (SIS) [Salinispora tropica CNB-440]
          Length = 319

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 55/133 (41%), Gaps = 2/133 (1%)

Query: 66  RVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSD 125
           RV I G+  S  +G ++   L   G  ++  +          ++   D+ + +S SG + 
Sbjct: 164 RVNIFGVSGSALVGEEMQIMLHRIGVAAWAWNDVHEGLASAALLRSGDVALGVSHSGRTR 223

Query: 126 ELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAI 185
           E   +L  A       +A+T  ++S +A  ADI L       +        ++   QL +
Sbjct: 224 ETIEMLAEAGSRGATTVAVTGFSRSPLAELADIALFT--ASGATTFRPDALSARHPQLVV 281

Query: 186 GDALAIALLESRN 198
            D L IA+ +  +
Sbjct: 282 LDLLYIAVAQRIH 294


>gi|149200351|ref|ZP_01877369.1| Putative transcriptional regulator, rpiR family protein
           [Lentisphaera araneosa HTCC2155]
 gi|149136532|gb|EDM24967.1| Putative transcriptional regulator, rpiR family protein
           [Lentisphaera araneosa HTCC2155]
          Length = 262

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/160 (20%), Positives = 60/160 (37%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           + +L +        +       +  ++  VV    G S  I     + +   G       
Sbjct: 77  IEALNTVNTQTSQQKIEQTASLVNELERVVVFGSGGGSTVIADDAVNRMFRFGVNITSYG 136

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      +  D L++V+S +G   E+      A+++   ++AIT    S +A  AD
Sbjct: 137 DFLMQRMVAATLNEDSLVLVISTTGQIAEINESAQIAKQYGAKVVAIT-RGDSPLAQLAD 195

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
           I L +  + +   +    T S    LA+ DA+A+ L   R
Sbjct: 196 IHLEVHIQEDEGIYKA--TASRYALLAVIDAIALELAVLR 233


>gi|116493383|ref|YP_805118.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Pediococcus pentosaceus ATCC 25745]
 gi|116103533|gb|ABJ68676.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Pediococcus pentosaceus ATCC 25745]
          Length = 397

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/132 (22%), Positives = 60/132 (45%), Gaps = 4/132 (3%)

Query: 201 ENDFYVLHPGG-KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            NDF     G  +L       + V    +    + I  P++ A+ I+  +R   + V D 
Sbjct: 229 ANDFVANLIGQDRLIQAKPSITTVGQVANKPVSIAIDQPVVRALDIMHSRRVDTLLVTDA 288

Query: 260 GQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
            Q LKG+++   I   +H      +V ++M  N   + E++++   +  + +  +  + V
Sbjct: 289 EQHLKGVVSIEKINEYYHSG---KTVGEIMDPNVFYVNENSIIRDTVDRILKRGLRNVPV 345

Query: 320 VDDCQKAIGIVH 331
           VD+ +K +GIV 
Sbjct: 346 VDNDRKLVGIVT 357



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 46/272 (16%), Positives = 77/272 (28%), Gaps = 59/272 (21%)

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
             I  S SG +  ++ I    ++ S   I I  ++   +A    + L           GL
Sbjct: 33  CFIGTSGSGKTTTMRMINRMLKQSSGT-IKINGQD---IAKMDPVKLRRKIGYVIQNIGL 88

Query: 174 APTTSAIMQLAIGDALAIALLESRNFS----------ENDFYVLHPGGKLGTLFVCASDV 223
            P  +    + +   L     E RN              DF   +P    G        V
Sbjct: 89  MPHMTIRENITLVPKLLKWSEEKRNERAKEMIKLVDLPEDFLDRYPSQLSGGQQQRIGVV 148

Query: 224 MHSGDSIPLVKIGCPLIDAITILSEK----------------------------RFGCVA 255
                   ++ +  P   A+  ++ +                            R     
Sbjct: 149 RALAADQDIILMDEPFG-ALDPITREDLQDLVKDLQERLGKTFIFVTHDMDEALRLSSRI 207

Query: 256 VVDEGQKLKGIITEGDIFRNFHKDL---------------NTLSVEDVMIKNPKVILEDT 300
           VV  G K   + T  +I R    D                +  +V  V  K P  I  D 
Sbjct: 208 VVMTGGKQVQVDTPENILRKPANDFVANLIGQDRLIQAKPSITTVGQVANK-PVSIAIDQ 266

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            +  A+ ++    +  L+V D  Q   G+V  
Sbjct: 267 PVVRALDIMHSRRVDTLLVTDAEQHLKGVVSI 298


>gi|46906372|ref|YP_012761.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes
           serotype 4b str. F2365]
 gi|47092268|ref|ZP_00230060.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|254853736|ref|ZP_05243084.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-503]
 gi|254933069|ref|ZP_05266428.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           HPB2262]
 gi|254993078|ref|ZP_05275268.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           J2-064]
 gi|300764888|ref|ZP_07074877.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N1-017]
 gi|46879636|gb|AAT02938.1| putative inosine-5'-monophosphate dehydrogenase [Listeria
           monocytogenes serotype 4b str. F2365]
 gi|47019470|gb|EAL10211.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           monocytogenes str. 4b H7858]
 gi|258607116|gb|EEW19724.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           R2-503]
 gi|293584627|gb|EFF96659.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           HPB2262]
 gi|300514375|gb|EFK41433.1| inosine-5-monophosphate dehydrogenase [Listeria monocytogenes FSL
           N1-017]
 gi|332310546|gb|EGJ23641.1| IMP dehydrogenase [Listeria monocytogenes str. Scott A]
          Length = 502

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILNLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|312143331|ref|YP_003994777.1| CBS domain containing protein [Halanaerobium sp. 'sapolanicus']
 gi|311903982|gb|ADQ14423.1| CBS domain containing protein [Halanaerobium sp. 'sapolanicus']
          Length = 378

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 39/226 (17%), Positives = 84/226 (37%), Gaps = 12/226 (5%)

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +D+ +++ ++G  + + A+      F       T   + + A  A           +   
Sbjct: 142 EDIRLIILYTGQLNIILALFNLLPAFP------TDGGRILRAFIAKKHSLAEATEIASRI 195

Query: 172 GLAPTTSA-IMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
           G     +  I+ L  G+ L + +     F        H    + +              +
Sbjct: 196 GKIFAVAFGILGLMSGNLLLVLIALFIYFGAMQ---EHKYSVIKSALSNLKVKDLMTRDV 252

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
             V +   +   I  + E +     V +   K+ G++T  D  +   ++ +   V+ +M 
Sbjct: 253 KTVPVNISVHRLIEKMFECKHSGFPV-ERDGKIVGMVTMEDARKIPQEEYSNTPVQAIMT 311

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           K    +  D  L  A +LL Q +I  L+V+D  Q+ +GI+   D++
Sbjct: 312 KEIHSVKADDELYEAFKLLFQKDIGRLLVMD-GQELLGIITRSDVM 356


>gi|288906043|ref|YP_003431265.1| RpiR family transcriptional regulator [Streptococcus gallolyticus
           UCN34]
 gi|288732769|emb|CBI14343.1| Hypothetical transcription regulator, RpiR family [Streptococcus
           gallolyticus UCN34]
          Length = 291

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/173 (15%), Positives = 76/173 (43%), Gaps = 3/173 (1%)

Query: 53  FHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRD 112
            + AV  ++  K  + +   G S +I       +   G      +       +   + + 
Sbjct: 122 LNRAVTILRMSKT-IHVFSYGTSLNIAESFREKMLKIGRNVQITNNLNYQIYEASCLEKG 180

Query: 113 DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHG 172
           D+ I++S+SG ++++  I    ++ ++P+I ++S  ++ ++ ++   LT+    ES    
Sbjct: 181 DVAILISYSGETEKMLQIAELCQQVNVPMILLSSLGENSLSSYSSCKLTIS-SKESLVQN 239

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
           +   ++ +  + + DAL  A    ++F ++    +    KL  +   ++ ++ 
Sbjct: 240 IGDFSTHLSVMFLLDALYSAYF-LKDFDQHYDTKIKKAKKLEHIRSSSNRMIQ 291


>gi|227831584|ref|YP_002833364.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
 gi|227458032|gb|ACP36719.1| CBS domain containing protein [Sulfolobus islandicus L.S.2.15]
          Length = 106

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 246 LSEKRFGCVAVVDE--GQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLL 302
           + ++      V+D   G  + GI+T   I R+  K ++    V  VMIKN   I  +  L
Sbjct: 1   MDKQGIRFALVIDNSKGDDVIGIVTRSIILRSLAKGVSQNEPVSKVMIKNVITINGEEDL 60

Query: 303 TVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 + ++NI+ L+ +++  K IG+V   D+L  
Sbjct: 61  IDTFMFMVRNNITHLLAINETGKIIGVVSLRDVLTA 96


>gi|254490872|ref|ZP_05104055.1| Putative nucleotidyltransferase DUF294 family [Methylophaga
           thiooxidans DMS010]
 gi|224464044|gb|EEF80310.1| Putative nucleotidyltransferase DUF294 family [Methylophaga
           thiooxydans DMS010]
          Length = 629

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/154 (15%), Positives = 56/154 (36%), Gaps = 33/154 (21%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV------------ 257
           G       +             +V+    + +   +++E     V ++            
Sbjct: 138 GSLRENDLMTTRVRKLISRLPLMVETTVSIQETARLMTENAVSSVLLIEPADDQDSDEVF 197

Query: 258 --DEGQ--KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPK---------VILEDTLLTV 304
             DEG   +LKG++T+ D+        + +    V    P           +  D  +  
Sbjct: 198 SGDEGGLWRLKGMVTDEDLR-------SQVIAAGVTTDRPIGQLSDGRLITLQSDESVNE 250

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           AM  + +++I  L V+   ++ +G++H  D++R+
Sbjct: 251 AMLTMLRNHIQRLPVL-HRRRPVGVIHLSDIVRY 283


>gi|220925558|ref|YP_002500860.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
 gi|219950165|gb|ACL60557.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
          Length = 156

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR- 274
           + + +   +    S+        + +    L +   G +AV+ E  KL GII+E D+   
Sbjct: 1   MIIRSVGELAMRHSLHSTTCEATITEVCRRLQDHHVGALAVL-EDGKLVGIISERDVISR 59

Query: 275 --NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                ++    +V  VM  +P+ I  +  L  A+Q +       L V+   +  I ++  
Sbjct: 60  VIAVGREPTATTVRAVMTPDPQTIDCENYLIDALQKMLDGQFRHLPVMRGDE-VIRMISM 118

Query: 333 LDL 335
            D+
Sbjct: 119 RDI 121


>gi|84490011|ref|YP_448243.1| transcriptional regulatory protein [Methanosphaera stadtmanae DSM
           3091]
 gi|84373330|gb|ABC57600.1| predicted transcriptional regulatory protein [Methanosphaera
           stadtmanae DSM 3091]
          Length = 132

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 51/118 (43%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-----RNFHKDL 280
              +I  +     +  A+  L       + V D+     G+I+  DI       +   DL
Sbjct: 7   MNKNIYYIGPDESVRFALKELYSLGVHRLFVFDDNDCPIGVISYEDIILLEGSEDTMIDL 66

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + V D+M ++   I  +  +  A  L+ +  +S L+VV++ +  +G++   D+ R 
Sbjct: 67  DMVKVSDLMTEHITTINANAKIQDAANLILRAEVSGLLVVENDKN-VGVLTKTDICRL 123



 Score = 47.6 bits (112), Expect = 0.002,   Method: Composition-based stats.
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           V++VM KN   I  D  +  A++ L    +  L V DD    IG++ + D++
Sbjct: 3   VKEVMNKNIYYIGPDESVRFALKELYSLGVHRLFVFDDNDCPIGVISYEDII 54


>gi|56478023|ref|YP_159612.1| hypothetical protein ebA4568 [Aromatoleum aromaticum EbN1]
 gi|56314066|emb|CAI08711.1| conserved hypothetical transmembrane protein [Aromatoleum
           aromaticum EbN1]
          Length = 380

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 21/116 (18%), Positives = 50/116 (43%), Gaps = 6/116 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGD--IFRNFHKDLNT 282
             + +  V     + +   +L+  +   + VV   Q+L  GI++  D  I R+    + T
Sbjct: 250 MSEDVVTVGTQASIGETWALLARHKIKAIPVVAGEQRLLVGIVSLHDFFIRRDL---VGT 306

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + + ++M ++      D  +    +L     +  + VVD+ +  +G++   DL+  
Sbjct: 307 MFIGELMSRDVVTARPDQPILELAKLFSDDGLHHVPVVDEHRNVVGMLTQSDLVAA 362



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK-AIGIVHFLD 334
            D+M ++   +     +     LL +H I  + VV   Q+  +GIV   D
Sbjct: 247 GDIMSEDVVTVGTQASIGETWALLARHKIKAIPVVAGEQRLLVGIVSLHD 296


>gi|268320079|ref|YP_003293735.1| transcriptional regulator [Lactobacillus johnsonii FI9785]
 gi|262398454|emb|CAX67468.1| transcriptional regulator [Lactobacillus johnsonii FI9785]
          Length = 272

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 3/186 (1%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS  K    +   +  + + + A  S     + L S     +  ++         + A  
Sbjct: 63  FSDLKIALAQDSMMTTSKSHEEAQTSSELSSKVLISSIEKTEELINPSVLKQAVSLLAKA 122

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R+ I G+G SG        T    G  +              ++++DDL++ LS SG +
Sbjct: 123 RRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKDDLVVGLSLSGHT 182

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            +    L  A+ +   +IAIT++  S +A   D+ L            +      + QL 
Sbjct: 183 KDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSEF---MNIGTVAGQVSQLY 239

Query: 185 IGDALA 190
           + D LA
Sbjct: 240 LCDVLA 245


>gi|146415032|ref|XP_001483486.1| hypothetical protein PGUG_04215 [Meyerozyma guilliermondii ATCC
           6260]
          Length = 521

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/189 (17%), Positives = 64/189 (33%), Gaps = 7/189 (3%)

Query: 152 VACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGG 211
           +   A   ++L  +        +P  SA M     + +AI +           +   P  
Sbjct: 46  LIQFASSNVSLEAKLTKKITLKSPFISAPMDTVTEENMAIHMALLGGIGIIH-HNCSPDE 104

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
           +   +               ++     + +   + +   F    V D G    KL GI+T
Sbjct: 105 QAEMVRRVKKYENGFISDPVVISPEVSVREVKQMKATMGFTSFPVTDTGKVGGKLVGIVT 164

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             D+     +D   +SV +VM  +     +   L+   QLLR      L +VD     + 
Sbjct: 165 LRDVQF---QDNLDISVSEVMTSDLITGKKGITLSEGNQLLRSSKKGKLPIVDGKGNLVS 221

Query: 329 IVHFLDLLR 337
           ++   DL +
Sbjct: 222 MISLTDLQK 230


>gi|91772542|ref|YP_565234.1| ABC glycine betaine/L-proline transporter, ATPase subunit
           [Methanococcoides burtonii DSM 6242]
 gi|91711557|gb|ABE51484.1| Glycine betaine ABC transporter ATP-binding protein
           [Methanococcoides burtonii DSM 6242]
          Length = 332

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 55/130 (42%), Gaps = 9/130 (6%)

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
            +D+      G   T  + A  VM   D  P+V +      A+ ++ E     + VV+  
Sbjct: 198 ADDYVSKFVAGVDRTKILTAETVMKRAD--PVVSMNSSPKVALQLMREHGISSIFVVNRE 255

Query: 261 QKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV 320
           + LKGII+  D  R   K     +++DVM  +      DT L   + ++     S + V 
Sbjct: 256 KHLKGIISVDDAVRKVGK-----TIKDVMTSDVTTTHPDTPLNELIPIIENS--SPIAVT 308

Query: 321 DDCQKAIGIV 330
            D  K +G++
Sbjct: 309 KDDGKLLGVI 318



 Score = 44.5 bits (104), Expect = 0.022,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 32/56 (57%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           L+ E VM +   V+  ++   VA+QL+R+H IS + VV+  +   GI+   D +R 
Sbjct: 215 LTAETVMKRADPVVSMNSSPKVALQLMREHGISSIFVVNREKHLKGIISVDDAVRK 270


>gi|15920377|ref|NP_376046.1| hypothetical protein ST0198 [Sulfolobus tokodaii str. 7]
 gi|15621159|dbj|BAB65155.1| 195aa long conserved hypothetical protein [Sulfolobus tokodaii str.
           7]
          Length = 195

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 10/118 (8%)

Query: 51  FQFHCAVEKI-----KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
            Q +  VE +         G+V++ G G+SG +G   A  L   G  ++ +         
Sbjct: 18  EQVNKMVEVLTNFYYNNRNGKVLVMGAGRSGLVGRAFAMRLLHLGYNAYVLGETIVP--- 74

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLP 163
              I   D+ I +S SG +  +      A+     LIAITS + S +A  AD+V+ +P
Sbjct: 75  --AIGEKDIAIAISGSGRTKLILTAAEAAKEAKATLIAITSYSDSPIAKIADVVVEIP 130


>gi|296876677|ref|ZP_06900725.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus parasanguinis ATCC 15912]
 gi|296432179|gb|EFH17978.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus parasanguinis ATCC 15912]
          Length = 240

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 3/121 (2%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGD 105
           Q         AV  +K ++ ++V  GIG SG +G   A   ++ G   F +   +     
Sbjct: 93  QDTFLQLIMEAVAILKNVE-QIVFVGIGSSGTLGRYGARYFSNIGK--FSMCIEDPWQPV 149

Query: 106 LGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKE 165
           L        +I LS SG + +   I+   +    P+IAIT+  +S ++  +D  +T    
Sbjct: 150 LQNSMEKTCVIALSESGETSQTLKIVQKLKEKGCPVIAITNTLESTLSRLSDCSITYHVP 209

Query: 166 P 166
            
Sbjct: 210 Q 210


>gi|170781839|ref|YP_001710171.1| 6-phospho-3-hexuloisomerase [Clavibacter michiganensis subsp.
           sepedonicus]
 gi|169156407|emb|CAQ01555.1| 6-phospho-3-hexuloisomerase [Clavibacter michiganensis subsp.
           sepedonicus]
          Length = 203

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 42/190 (22%), Positives = 78/190 (41%), Gaps = 13/190 (6%)

Query: 24  VQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLA 83
           V  AL  I  E   ++   +  + +L+ +   A   I+  + RV   G G+SG      A
Sbjct: 18  VATALTLIADENARVAR--ALAEPDLAARLDEAARVIRDGR-RVFALGAGRSGLALRMTA 74

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
                 G  +  V  A +       I   D+++V S SG++  + A    A      ++A
Sbjct: 75  MRFMHLGLDAHVVGEATSP-----AIAEGDVLLVASGSGTTAGIVAAAQTAHDVGARIVA 129

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-----IMQLAIGDALAIALLESRN 198
           +T+ + S +A  AD+ + +P   +    G      A     +    +GDA+  AL ++  
Sbjct: 130 LTTADDSPLADLADVTVLIPAAAKQDHGGTVSAQYAGGLFELSVALVGDAVFHALWQASG 189

Query: 199 FSENDFYVLH 208
            S ++ +  H
Sbjct: 190 LSADELWPRH 199


>gi|326793796|ref|YP_004311616.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
 gi|326544560|gb|ADZ89780.1| CBS domain containing membrane protein [Marinomonas mediterranea
           MMB-1]
          Length = 138

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/111 (19%), Positives = 44/111 (39%), Gaps = 5/111 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDL----NTLSVED 287
            V     + D +  L++++     V D    L G ++E DI     +          VE 
Sbjct: 18  FVHPETSIADCVKGLAQRKLPGAPVADANGHLIGFVSEQDILPALMQSAYYSEEPRKVET 77

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           VM  NP  +  +  +    +++ +    V  VV + ++ IGI+    + + 
Sbjct: 78  VMKTNPLSVKPNDHIMEIAKMMSEPKPKVYPVV-EGEEIIGIITRRHVTQA 127



 Score = 44.9 bits (105), Expect = 0.016,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 25/55 (45%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +L V DVM ++   +  +T +   ++ L Q  +    V D     IG V   D+L
Sbjct: 5   SLLVRDVMSRDTFFVHPETSIADCVKGLAQRKLPGAPVADANGHLIGFVSEQDIL 59


>gi|238896441|ref|YP_002921179.1| putative regulator [Klebsiella pneumoniae NTUH-K2044]
 gi|238548761|dbj|BAH65112.1| putative regulator [Klebsiella pneumoniae subsp. pneumoniae
           NTUH-K2044]
          Length = 242

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHHCKVMSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|238620215|ref|YP_002915041.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.16.4]
 gi|238381285|gb|ACR42373.1| glucosamine--fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus M.16.4]
          Length = 591

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRESS-RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D+II +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIIIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|227826814|ref|YP_002828593.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.14.25]
 gi|227458609|gb|ACP37295.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.14.25]
          Length = 584

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  ++      I      V + G G S H G       +  G     V AAE  +  L
Sbjct: 263 NSLMEKYLSLASMILYGAKNVYVIGNGTSLHAGLISTYYFSEIGLNVNVVSAAEFPYYAL 322

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             +T   +II +S SG + ++   +  A++    ++ IT+   S +A  +++ L +   P
Sbjct: 323 ENVTTGSVIIAISQSGETSDVIRSVKMAKQRGAVILGITNSVGSRLALESNVYLPITARP 382

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI 191
           E     +  T +    + +   L++
Sbjct: 383 E---MAVPATKTFTSTIVVLKVLSL 404


>gi|47218369|emb|CAG01890.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 571

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/174 (18%), Positives = 60/174 (34%), Gaps = 15/174 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M      A+AIA+            ++H              V         
Sbjct: 65  KTPLISSPMDTVTESAMAIAMALMGGIG-----IIHHNCTPEFQANEVRKVKRFEQGFIT 119

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
                     + D +   +   F  + + + G+   KL GI+T  DI     KD +   +
Sbjct: 120 DPVVMSPRHTVGDVVEAKTRHGFSGIPITETGKMGSKLVGIVTSRDIDFLSEKD-HDKPL 178

Query: 286 EDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           E+ M K  +  V      L  A  +L++     L +V++  + + I+   DL +
Sbjct: 179 EEAMTKREDLVVAPAGVTLKEANDILQRSKKGKLPIVNNNDELVAIIARTDLKK 232


>gi|291568270|dbj|BAI90542.1| hypothetical protein [Arthrospira platensis NIES-39]
          Length = 204

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 25/118 (21%), Positives = 48/118 (40%), Gaps = 6/118 (5%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAV-VDEGQKLKGIITEGDI---FRNFHKDLN 281
              ++  ++    + +A+  +++     + V     Q   GI+TE D+      + KD  
Sbjct: 8   MTTNVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVIYKVTAYGKDPK 67

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            + V ++M K    I  D  +    +L  Q  I    V+ +    +GIV   D+L  G
Sbjct: 68  KMRVYEIMTKPCISINPDLGVEYVARLFAQTGIRRAPVIQEE--LLGIVSVTDILSKG 123



 Score = 40.7 bits (94), Expect = 0.31,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV-VDDCQKAIGIVHFLDLL 336
           L  +D+M  N   I     +  A++ +    +  L+V     Q A GIV   D++
Sbjct: 2   LKAKDIMTTNVVTIRGSATVAEAVKQMNDLCLRALIVQRRHEQDAYGIVTETDVI 56


>gi|227819553|ref|YP_002823524.1| RpiR family transcriptional regulator [Sinorhizobium fredii NGR234]
 gi|227338552|gb|ACP22771.1| transcriptional regulator, RpiR family [Sinorhizobium fredii
           NGR234]
          Length = 287

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 40/172 (23%), Positives = 63/172 (36%), Gaps = 6/172 (3%)

Query: 25  QCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLAS 84
             A   I   +  L  L  SL          A +++   +        G S  I  +L +
Sbjct: 92  DVAQDIITKAQNALFLLHRSLD---LAAIEQAADRLAGAEMIYAFGSGGNSSMIAGELQN 148

Query: 85  TLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAI 144
            L   G                    + D II  S+SG + EL      AR   +P IA+
Sbjct: 149 RLFRLGLRITASSDHSMQLMLAAAARQSDAIIGSSFSGRNAELVRAFTLARDAKVPTIAL 208

Query: 145 TSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           T +  S VA  AD  +++P +     +   PT++ I  +A+ D LA  +   
Sbjct: 209 T-QTGSPVARAAD--ISVPVDLPEGNNIYRPTSTRIAYVALVDILASLVAYR 257


>gi|156841186|ref|XP_001643968.1| hypothetical protein Kpol_1001p22 [Vanderwaltozyma polyspora DSM
           70294]
 gi|156114599|gb|EDO16110.1| hypothetical protein Kpol_1001p22 [Vanderwaltozyma polyspora DSM
           70294]
          Length = 522

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 33/172 (19%), Positives = 62/172 (36%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
            AP  S+ M       +AI +            ++H              V    +    
Sbjct: 69  NAPLVSSPMDTVTESEMAIHMALLGGIG-----IIHHNCSPEEQAEMVRKVKKFENGFIN 123

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSV 285
           S  ++     + +A  +     F    V + G    K+ GIIT  DI +   +D  +L V
Sbjct: 124 SPVVISPNATVFEAKQMRERFGFSGFPVTENGEQFGKVMGIITSRDI-QFIEED--SLLV 180

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             VM  +     +   L+   ++L+      L++VDD    + ++   DL++
Sbjct: 181 SQVMTTDLVTGKQGITLSEGNEILKTTKKGKLLIVDDNGNLVSMLSRTDLMK 232


>gi|118431195|ref|NP_147492.2| hypothetical protein APE_0785.1 [Aeropyrum pernix K1]
 gi|116062519|dbj|BAA79763.2| conserved hypothetical protein [Aeropyrum pernix K1]
          Length = 630

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/168 (16%), Positives = 64/168 (38%), Gaps = 32/168 (19%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +++D  ++    +L        ++M +   I +V     L  A+  +       + V D
Sbjct: 437 ITKDD--LVEAYKRLMAGRSKVENIM-TPGRIGIVHPHHSLYHAVNKMHNFYLDALTVYD 493

Query: 259 EGQKLKGIITE---------------------------GDIFRNFHKDLNTLSVEDVMIK 291
            G+++ G+++                            G   R  +  +  L V DV  +
Sbjct: 494 -GREVIGVVSANRLPFVAYEDAMGRKSRRLIWVRKLVKGSARRGRYVKVLPLVVLDVTTE 552

Query: 292 -NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                +  D  +  A++L+ ++N+  + VVD   + +G+V   D++R 
Sbjct: 553 LRGVYVSPDDDVVKAIELMEKYNVDGIPVVDKDGRVLGVVTKTDVVRE 600



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 8/114 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------KDLNTLS 284
           + +   +  A  ++   R   V VVDE   +KG++++  + +           +  +   
Sbjct: 332 ITVNDSIEHARRVMLRYRSNYVLVVDEDGNIKGVVSKWSMLKAIGLRGPLWRRRVYDKFF 391

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++ VM  N + I  D  +      +      V++V  D  K IG +   DL+  
Sbjct: 392 IDFVMDTNIERIKPDASIEEVALKMASSRSEVVIVEGDDGKPIGFITKDDLVEA 445



 Score = 55.3 bits (132), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 21/111 (18%), Positives = 43/111 (38%), Gaps = 3/111 (2%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN- 281
                 +I  +K    + +    ++  R   V V  +  K  G IT+ D+   + + +  
Sbjct: 393 DFVMDTNIERIKPDASIEEVALKMASSRSEVVIVEGDDGKPIGFITKDDLVEAYKRLMAG 452

Query: 282 TLSVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              VE++M      ++     L  A+  +    +  L V D  ++ IG+V 
Sbjct: 453 RSKVENIMTPGRIGIVHPHHSLYHAVNKMHNFYLDALTVYD-GREVIGVVS 502



 Score = 51.4 bits (122), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/67 (23%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 274 RNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD-CQKAIGIVH 331
           R   + L T   V  +M++   V   +T +     ++ +H+ +VL V+D+   + +G+V 
Sbjct: 200 RESERGLKTVAKVRRIMLRGVPVATPETPIEYVADVMAEHDYTVLPVIDEKEGRVVGVVT 259

Query: 332 FLDLLRF 338
             D+ R 
Sbjct: 260 IFDVARA 266



 Score = 45.3 bits (106), Expect = 0.015,   Method: Composition-based stats.
 Identities = 11/68 (16%), Positives = 29/68 (42%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
           G+   +       + +      V     ++ AI ++ +     + VVD+  ++ G++T+ 
Sbjct: 536 GRYVKVLPLVVLDVTTELRGVYVSPDDDVVKAIELMEKYNVDGIPVVDKDGRVLGVVTKT 595

Query: 271 DIFRNFHK 278
           D+ R   +
Sbjct: 596 DVVRELAR 603



 Score = 43.3 bits (101), Expect = 0.057,   Method: Composition-based stats.
 Identities = 22/123 (17%), Positives = 50/123 (40%), Gaps = 7/123 (5%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV---DEGQKLKGIITEGDIFRNFH 277
                +     +V  G PL     ++  +      VV   ++ +K+ G IT  ++ +   
Sbjct: 2   KAWEIARKPRVVVYPGDPLTYVRAMMRREEEPIAVVVVESEKSEKVVGYITWNEVIQ-VT 60

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD--DCQKAIGIVHFLDL 335
              + L  +D M+  P V  +D  +    + + +  +  + V++  D    +G+V   D+
Sbjct: 61  SHYSHLRAKDAMLDYP-VAFKDDDIGDVYKRMVEEKVYAIPVLESRDNPNLVGVVTVADI 119

Query: 336 LRF 338
           +R 
Sbjct: 120 VRA 122



 Score = 43.0 bits (100), Expect = 0.068,   Method: Composition-based stats.
 Identities = 20/172 (11%), Positives = 55/172 (31%), Gaps = 47/172 (27%)

Query: 214 GTLFVCASDVMH-SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE-GQKLKGIITEGD 271
                  + V       +P+     P+     +++E  +  + V+DE   ++ G++T  D
Sbjct: 203 ERGLKTVAKVRRIMLRGVPVATPETPIEYVADVMAEHDYTVLPVIDEKEGRVVGVVTIFD 262

Query: 272 IFRNFHKD---------------------------------------------LNTLSVE 286
           + R + +                                              +  L+  
Sbjct: 263 VARAYIEGAKPGRVRPVARPVVPIEVKPEERVAYVSTERMLQQVMVERPQPVEIAGLTAS 322

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           ++       I  +  +  A +++ ++  + ++VVD+     G+V    +L+ 
Sbjct: 323 EIARSELPAITVNDSIEHARRVMLRYRSNYVLVVDEDGNIKGVVSKWSMLKA 374


>gi|32364482|gb|AAO61674.1| AKIN gamma [Medicago truncatula]
          Length = 420

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 22/133 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDI-----FRNFHKD 279
           +   I  V    P++ A   + +KR G V V+  G     G I+  D+         + D
Sbjct: 261 TPKQIIKVYEDEPVLQAFKEMRKKRVGGVPVIKRGGTTAVGNISLRDVQFLLTAPEIYHD 320

Query: 280 LNTLSVEDV----------------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
             T++V+D                 M         D  +   +QLL +  I  + VVDD 
Sbjct: 321 YRTITVKDFLTSVRSYLEKNKNAFPMSSEFITCKRDCTVKELIQLLDKEQIHRVYVVDDD 380

Query: 324 QKAIGIVHFLDLL 336
               G++   D++
Sbjct: 381 GNLEGLITLRDII 393



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
             + R  +  DF        + +      +           K  C + + I +L +++  
Sbjct: 318 YHDYRTITVKDFLTS-----VRSYLEKNKNAFPMSSEFITCKRDCTVKELIQLLDKEQIH 372

Query: 253 CVAVVDEGQKLKGIITEGDIFRNF 276
            V VVD+   L+G+IT  DI    
Sbjct: 373 RVYVVDDDGNLEGLITLRDIISRL 396



 Score = 39.5 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 13/54 (24%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDC--------QKAIGIVHFLDLLRFGII 341
           I  D  L  A+++L +HNI    VVD           + IGIV F      GI+
Sbjct: 61  IKSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEF-----AGIV 109


>gi|59712130|ref|YP_204906.1| CBS domain-containing protein [Vibrio fischeri ES114]
 gi|59480231|gb|AAW86018.1| CBS domain containing protein [Vibrio fischeri ES114]
          Length = 138

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/109 (21%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 235 IGCPLIDAITI-LSEKRFGCVAVVDEGQKLKGIITEGDIFRNF----HKDLNTLSVEDVM 289
               L  A+   ++ +  G   VV+E +++ G I+E D+ ++     +   +T  V DVM
Sbjct: 19  ADMSLAAALDQFITSQHIGG-PVVNEQREVIGFISEQDLIKSLLGVSYHCQDTHVVADVM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                 +  D  +    Q +  +   +  VV +  K +GI+   ++L+ 
Sbjct: 78  KTEVLTVTPDDAIVDLAQTMTDNKPKIYPVV-EDGKLVGIITRRNVLQA 125



 Score = 44.5 bits (104), Expect = 0.025,   Method: Composition-based stats.
 Identities = 14/59 (23%), Positives = 27/59 (45%), Gaps = 2/59 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    V+  M   P  +  D  L  A+ Q +   +I    VV++ ++ IG +   DL++
Sbjct: 1   MENKKVKQYMSVRPLYLTADMSLAAALDQFITSQHIGG-PVVNEQREVIGFISEQDLIK 58


>gi|53719576|ref|YP_108562.1| hypothetical protein BPSL1964 [Burkholderia pseudomallei K96243]
 gi|53725416|ref|YP_102671.1| CBS domain-containing protein [Burkholderia mallei ATCC 23344]
 gi|67642694|ref|ZP_00441447.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|76808985|ref|YP_333265.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|121599268|ref|YP_992809.1| CBS domain-containing protein [Burkholderia mallei SAVP1]
 gi|124383341|ref|YP_001026403.1| CBS domain-containing protein [Burkholderia mallei NCTC 10229]
 gi|126439295|ref|YP_001058728.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
 gi|126451035|ref|YP_001080325.1| CBS domain-containing protein [Burkholderia mallei NCTC 10247]
 gi|126454211|ref|YP_001065981.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
 gi|134282216|ref|ZP_01768921.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|167002921|ref|ZP_02268711.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|167719875|ref|ZP_02403111.1| CBS domain protein [Burkholderia pseudomallei DM98]
 gi|167738877|ref|ZP_02411651.1| CBS domain protein [Burkholderia pseudomallei 14]
 gi|167816100|ref|ZP_02447780.1| CBS domain protein [Burkholderia pseudomallei 91]
 gi|167824472|ref|ZP_02455943.1| CBS domain protein [Burkholderia pseudomallei 9]
 gi|167846008|ref|ZP_02471516.1| CBS domain protein [Burkholderia pseudomallei B7210]
 gi|167894582|ref|ZP_02481984.1| CBS domain protein [Burkholderia pseudomallei 7894]
 gi|167902984|ref|ZP_02490189.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167911224|ref|ZP_02498315.1| CBS domain protein [Burkholderia pseudomallei 112]
 gi|167919245|ref|ZP_02506336.1| CBS domain protein [Burkholderia pseudomallei BCC215]
 gi|217423669|ref|ZP_03455170.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|226192922|ref|ZP_03788534.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237811993|ref|YP_002896444.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|242315143|ref|ZP_04814159.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|254178427|ref|ZP_04885082.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|254180023|ref|ZP_04886622.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|254188567|ref|ZP_04895078.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254197241|ref|ZP_04903663.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|254199608|ref|ZP_04905974.1| CBS domain protein [Burkholderia mallei FMH]
 gi|254205926|ref|ZP_04912278.1| CBS domain protein [Burkholderia mallei JHU]
 gi|254261201|ref|ZP_04952255.1| CBS domain protein [Burkholderia pseudomallei 1710a]
 gi|254297857|ref|ZP_04965310.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|254358673|ref|ZP_04974946.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|52209990|emb|CAH35963.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|52428839|gb|AAU49432.1| CBS domain protein [Burkholderia mallei ATCC 23344]
 gi|76578438|gb|ABA47913.1| CBS domain protein [Burkholderia pseudomallei 1710b]
 gi|121228078|gb|ABM50596.1| CBS domain protein [Burkholderia mallei SAVP1]
 gi|124291361|gb|ABN00630.1| CBS domain protein [Burkholderia mallei NCTC 10229]
 gi|126218788|gb|ABN82294.1| CBS domain protein [Burkholderia pseudomallei 668]
 gi|126227853|gb|ABN91393.1| CBS domain protein [Burkholderia pseudomallei 1106a]
 gi|126243905|gb|ABO06998.1| CBS domain protein [Burkholderia mallei NCTC 10247]
 gi|134246254|gb|EBA46343.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|147749204|gb|EDK56278.1| CBS domain protein [Burkholderia mallei FMH]
 gi|147753369|gb|EDK60434.1| CBS domain protein [Burkholderia mallei JHU]
 gi|148027800|gb|EDK85821.1| CBS domain protein [Burkholderia mallei 2002721280]
 gi|157807702|gb|EDO84872.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|157936246|gb|EDO91916.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|160699466|gb|EDP89436.1| CBS domain protein [Burkholderia mallei ATCC 10399]
 gi|169653982|gb|EDS86675.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|184210563|gb|EDU07606.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|217393527|gb|EEC33548.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|225935012|gb|EEH30987.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|237503401|gb|ACQ95719.1| CBS domain protein [Burkholderia pseudomallei MSHR346]
 gi|238523883|gb|EEP87319.1| CBS domain protein [Burkholderia mallei GB8 horse 4]
 gi|242138382|gb|EES24784.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|243061467|gb|EES43653.1| CBS domain protein [Burkholderia mallei PRL-20]
 gi|254219890|gb|EET09274.1| CBS domain protein [Burkholderia pseudomallei 1710a]
          Length = 154

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL  A+  ++E   G + VV E   L GI+T  +I      +   +  + V  VM
Sbjct: 17  VTPDTPLRSAVDTMAEHDIGSL-VVMEYGDLVGILTFREIILRLKANGGSIGEVLVRTVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDIDEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.5 bits (91), Expect = 0.77,   Method: Composition-based stats.
 Identities = 11/42 (26%), Positives = 24/42 (57%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  DT L  A+  + +H+I  L+V+ +    +GI+ F +++
Sbjct: 16  TVTPDTPLRSAVDTMAEHDIGSLVVM-EYGDLVGILTFREII 56


>gi|229583996|ref|YP_002842497.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.16.27]
 gi|238618938|ref|YP_002913763.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.16.4]
 gi|228019045|gb|ACP54452.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.16.27]
 gi|238380007|gb|ACR41095.1| glutamine amidotransferase class-II [Sulfolobus islandicus M.16.4]
          Length = 584

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  ++      I      V + G G S H G       +  G     V AAE  +  L
Sbjct: 263 NSLMEKYLSLASMILYGAKNVYVIGNGTSLHAGLISTYYFSEIGLNVNVVSAAEFPYYAL 322

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             +T   +II +S SG + ++   +  A++    ++ IT+   S +A  +++ L +   P
Sbjct: 323 ENVTTGSVIIAISQSGETSDVIRSVKMAKQRGAVILGITNSVGSRLALESNVYLPITARP 382

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI 191
           E     +  T +    + +   L++
Sbjct: 383 E---MAVPATKTFTSTIVVLKVLSL 404


>gi|254172989|ref|ZP_04879663.1| CBS domain pair protein [Thermococcus sp. AM4]
 gi|214033145|gb|EEB73973.1| CBS domain pair protein [Thermococcus sp. AM4]
          Length = 281

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/143 (19%), Positives = 51/143 (35%), Gaps = 32/143 (22%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR------------ 274
             ++ +V  G PL  A+  L       + V+D+   L G++ E DI +            
Sbjct: 134 QRNVSVVWQGTPLKAALKALLLCNAMAIPVIDDEGNLVGMVDETDILKDSEVIRVMKQTS 193

Query: 275 --------------------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNI 314
                                    L    V+D+M  N  V      +    Q + Q++I
Sbjct: 194 LSASSEEDWILESNPTLLFEKAELQLPKKPVKDIMNPNLIVATPHMSVYDVAQKMVQYHI 253

Query: 315 SVLMVVDDCQKAIGIVHFLDLLR 337
             L V+    + +GIV  +D+++
Sbjct: 254 EQLPVIKGEGELVGIVRDMDIIK 276



 Score = 44.5 bits (104), Expect = 0.021,   Method: Composition-based stats.
 Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 21/177 (11%)

Query: 182 QLAIGDALAIALLESRNFSENDFYVL---------HPGGKLGTLFVCASDVMHS------ 226
            +   D + I L  +R ++   F               G+L  +      ++H       
Sbjct: 5   TIMTKDPVVIELPATRGYALELFKKYKVRSFPVVSKKTGQLAGIISIKRVLLHPDEDQLA 64

Query: 227 ---GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKD--L 280
                 +P+VK    L  A+  + E  +  V VVD+  K+ GI+T GDI  R   K+  L
Sbjct: 65  MLIRREVPVVKPNDDLKKAVRKMLEMDYRRVVVVDDDGKVVGILTVGDIVRRYLAKNEKL 124

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +++E    +N  V+ + T L  A++ L   N   + V+DD    +G+V   D+L+
Sbjct: 125 KDITIEPYYQRNVSVVWQGTPLKAALKALLLCNAMAIPVIDDEGNLVGMVDETDILK 181



 Score = 42.6 bits (99), Expect = 0.084,   Method: Composition-based stats.
 Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFL 333
           + V+ +M K+P VI        A++L +++ +    VV     +  GI+   
Sbjct: 1   MRVKTIMTKDPVVIELPATRGYALELFKKYKVRSFPVVSKKTGQLAGIISIK 52


>gi|199597629|ref|ZP_03211057.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
 gi|258509771|ref|YP_003172522.1| RpiR family transcriptional regulator [Lactobacillus rhamnosus GG]
 gi|199591436|gb|EDY99514.1| Transcriptional regulator [Lactobacillus rhamnosus HN001]
 gi|257149698|emb|CAR88671.1| Transcriptional regulator, RpiR family [Lactobacillus rhamnosus GG]
 gi|259651035|dbj|BAI43197.1| transcriptional regulator [Lactobacillus rhamnosus GG]
          Length = 315

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 30/159 (18%), Positives = 61/159 (38%), Gaps = 3/159 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            ++++              A+  ++  +  + + G+  S  +   L   L   G  + F 
Sbjct: 104 AIAAVRDLPDELDQAAVQTAITTLRHAR-HIYLVGMSASALVAQDLYLKLIRAGYLAIFD 162

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             A  +   +   T  D ++V S+SG + E+      ARR   P+I +T    S +   A
Sbjct: 163 ADAHTALERVYYTTAADAVVVFSYSGLTKEVVLAAQQARRNQTPVIVVTRAEPSPLRDAA 222

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLE 195
             V+ LP  P      +   TS   +  + + L + ++ 
Sbjct: 223 SCVIALP--PTEPLLRIGAVTSMFTETYVANILFLGVVH 259


>gi|229579618|ref|YP_002838017.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus Y.G.57.14]
 gi|228010333|gb|ACP46095.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus Y.G.57.14]
          Length = 591

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRKSS-RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|153955085|ref|YP_001395850.1| nucleotidyltransferase [Clostridium kluyveri DSM 555]
 gi|219855524|ref|YP_002472646.1| hypothetical protein CKR_2181 [Clostridium kluyveri NBRC 12016]
 gi|146347943|gb|EDK34479.1| Predicted nucleotidyltransferase [Clostridium kluyveri DSM 555]
 gi|219569248|dbj|BAH07232.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
          Length = 348

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 26/107 (24%), Positives = 53/107 (49%), Gaps = 7/107 (6%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMI 290
            +     +  AI  L++     + VV E  KL G++T+GDI R   +  + + SVE++M 
Sbjct: 7   FINKKISIRQAIEKLNKTAKKILIVV-ENNKLIGVVTDGDIRRWIVRSGDLSSSVENIMN 65

Query: 291 KNPKV--ILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            +P    I          +L++++ I  + ++++  + I I+ + DL
Sbjct: 66  VHPIYLNIKNRNRAN---KLMKKYRIESIPLINEYHEVIDIIFWDDL 109


>gi|161520785|ref|YP_001584212.1| CBS domain-containing protein [Burkholderia multivorans ATCC 17616]
 gi|189353033|ref|YP_001948660.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
 gi|160344835|gb|ABX17920.1| CBS domain containing membrane protein [Burkholderia multivorans
           ATCC 17616]
 gi|189337055|dbj|BAG46124.1| putative signal transduction protein [Burkholderia multivorans ATCC
           17616]
          Length = 143

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 43/117 (36%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  ++     G + V D   +L  I+T+ DI  R      +   
Sbjct: 8   MSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCD-HGELVAIVTDRDIAVRALAHGRSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V  V  +  +   ED  +    Q +    +  + V+D  ++  GIV   D+  R G
Sbjct: 67  PVRAVASEPVQWCTEDEGVGDVQQRMADVQLHRMPVLDRHRRVAGIVSLGDIATRAG 123



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 12/51 (23%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A +L+++ +I VL V D   + + IV   D+
Sbjct: 4   VNEIMSRDVVCVAPTDTIRHAAELMQRFDIGVLPVCDH-GELVAIVTDRDI 53


>gi|205374111|ref|ZP_03226911.1| transcriptional regulator [Bacillus coahuilensis m4-4]
          Length = 212

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/143 (22%), Positives = 57/143 (39%), Gaps = 8/143 (5%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L T  +    V        +V     + DAI  +  +  G + VVD    L
Sbjct: 61  FYTGKTGTQLLTENLKKIYVKDFQSIPVVVSENVSVYDAICTMFLEDVGTLFVVDGKSYL 120

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     ++L +L V  +M + P   V  +D LL    + L    I  + V
Sbjct: 121 VGVLSRKDLLRASIGKQELTSLPVNIIMTRMPNITVCEKDDLLIDVAKDLIDKQIDAVPV 180

Query: 320 VDD----CQKAIGIVHFLDLLRF 338
           V        + +G +   ++ + 
Sbjct: 181 VKQLETGEVEVVGRITKTNITKA 203



 Score = 42.2 bits (98), Expect = 0.12,   Method: Composition-based stats.
 Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             ++L  + V+D     P V+ E+  +  A+  +   ++  L VVD     +G++   DL
Sbjct: 71  LTENLKKIYVKDFQSI-PVVVSENVSVYDAICTMFLEDVGTLFVVDGKSYLVGVLSRKDL 129

Query: 336 LRFGI 340
           LR  I
Sbjct: 130 LRASI 134


>gi|74317406|ref|YP_315146.1| hypothetical protein Tbd_1388 [Thiobacillus denitrificans ATCC
           25259]
 gi|74056901|gb|AAZ97341.1| conserved hypothetical protein containing CBS domain [Thiobacillus
           denitrificans ATCC 25259]
          Length = 149

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 22/106 (20%), Positives = 42/106 (39%), Gaps = 8/106 (7%)

Query: 232 LVKIGCPLI--DAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFR---NFHKDLNTL 283
           +V     L   +A  ++     G + +V++        GI+T+ DI         +   L
Sbjct: 11  VVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEVVAAGVNPEAL 70

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           +  D+M      + E   L  A++ +R   +  + VVD     +GI
Sbjct: 71  TAGDIMAAELATLGESEGLYEALRYMRDKGVRRMPVVDGDGALVGI 116



 Score = 41.4 bits (96), Expect = 0.19,   Method: Composition-based stats.
 Identities = 13/65 (20%), Positives = 30/65 (46%), Gaps = 7/65 (10%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDL---- 335
           + + ++  +   V      +T A  L+R H++  L++V+D       +GI+   D+    
Sbjct: 1   MPIGEICNREVVVADTSLSVTEAAGLMRTHHVGDLVIVEDRGGRRHPVGILTDRDIAVEV 60

Query: 336 LRFGI 340
           +  G+
Sbjct: 61  VAAGV 65


>gi|50954121|ref|YP_061409.1| RpiR family transcriptional regulator [Leifsonia xyli subsp. xyli
           str. CTCB07]
 gi|50950603|gb|AAT88304.1| transcriptional regulator, RpiR family [Leifsonia xyli subsp. xyli
           str. CTCB07]
          Length = 289

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 61/177 (34%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
            +S  +   +    E   +      L  E       A         RV + GIG S    
Sbjct: 95  SDSLQEVVAKIAYQETLAIERTARELDAEALDAVVAA----IIAASRVDLYGIGSSILTA 150

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L   L+  G  +F    +  +     +    ++ I  S SG + E    L  AR    
Sbjct: 151 QDLQQKLSRIGLTAFCSVDSHLALSSAALQKPGNVAIAFSHSGETRETNHALAVARAAGA 210

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             +AIT+  +S +A  +D++L           G     S   QLA+ D L + + + 
Sbjct: 211 TTVAITNVPESSIAAVSDLLLMTQARENFYRSGA--MASRTAQLALVDFLFVRVAQR 265


>gi|149195125|ref|ZP_01872216.1| Nucleotidyl transferase [Caminibacter mediatlanticus TB-2]
 gi|149134677|gb|EDM23162.1| Nucleotidyl transferase [Caminibacter mediatlanticus TB-2]
          Length = 348

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 1/103 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVE 286
                +K    +  A+ I+ +       VVD   KL G +++GDI R           +E
Sbjct: 1   MKNVFLKENDTIKQALEIIDKGAMKIAFVVDNSNKLIGSVSDGDIRRALLNGKTLEDKIE 60

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           ++  KNP            + L     I  + +VDD  + + I
Sbjct: 61  NIYNKNPLKAHISDDRKNIINLCLNKKIYQIPLVDDENRIVDI 103


>gi|78066074|ref|YP_368843.1| XRE family transcriptional regulator [Burkholderia sp. 383]
 gi|107022531|ref|YP_620858.1| XRE family transcriptional regulator [Burkholderia cenocepacia AU
           1054]
 gi|116689480|ref|YP_835103.1| XRE family transcriptional regulator [Burkholderia cenocepacia
           HI2424]
 gi|170732786|ref|YP_001764733.1| CBS domain-containing protein [Burkholderia cenocepacia MC0-3]
 gi|206559832|ref|YP_002230596.1| hypothetical protein BCAL1465 [Burkholderia cenocepacia J2315]
 gi|77966819|gb|ABB08199.1| putative transcriptional regulator, XRE family [Burkholderia sp.
           383]
 gi|105892720|gb|ABF75885.1| putative transcriptional regulator, XRE family [Burkholderia
           cenocepacia AU 1054]
 gi|116647569|gb|ABK08210.1| putative transcriptional regulator, XRE family [Burkholderia
           cenocepacia HI2424]
 gi|169816028|gb|ACA90611.1| CBS domain containing protein [Burkholderia cenocepacia MC0-3]
 gi|198035873|emb|CAR51764.1| conserved hypothetical protein [Burkholderia cenocepacia J2315]
          Length = 151

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L G++T  +I    H +   +  + V  VM
Sbjct: 17  VTPDKPLREAVDTMAEHDIGSL-VVMEYGDLVGMLTFREIILRLHVNGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D  L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDKPLREAVDTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|323142818|ref|ZP_08077530.1| SIS domain protein [Succinatimonas hippei YIT 12066]
 gi|322417360|gb|EFY07982.1| SIS domain protein [Succinatimonas hippei YIT 12066]
          Length = 291

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/167 (20%), Positives = 65/167 (38%), Gaps = 5/167 (2%)

Query: 39  SSLESSLQGELSFQFHCAVE---KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFF 95
            ++   L   L      A++   ++     R++  G G S  +   +A+     G    F
Sbjct: 112 QNISDGLNNTLKLLNFNALDRSAQLICKASRLICFGYGNSATVCKDIATRFVRLGISCEF 171

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
                        +T+  L++ +S++GSS +L   L   +     +I ITS   S  +  
Sbjct: 172 SADPHQQATLSACLTKGTLVMAVSYTGSSVDLLNNLQIVKENGGKIILITSHTLSPASKL 231

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSEN 202
           AD VL +   PE   +  A  +  ++ +AI D L   +   +  +  
Sbjct: 232 ADEVL-IGVGPEVKNNSEASVSR-LIHMAINDVLYTKVSILKKETFE 276


>gi|284998237|ref|YP_003420005.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.D.8.5]
 gi|284446133|gb|ADB87635.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.D.8.5]
          Length = 591

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRKSS-RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|284025469|ref|ZP_06379867.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus 132]
          Length = 408

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 245 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGI 304

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  S+ D M ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++      
Sbjct: 305 RG---HKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLIT----- 356

Query: 337 RFGII 341
           R  ++
Sbjct: 357 RANVV 361



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 240 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE 298

Query: 334 DL 335
           D+
Sbjct: 299 DI 300


>gi|330010965|ref|ZP_08306930.1| SIS domain protein [Klebsiella sp. MS 92-3]
 gi|328534342|gb|EGF60952.1| SIS domain protein [Klebsiella sp. MS 92-3]
          Length = 242

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I A + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDELLEQAVDIILASE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+             +++ITS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHHCKVMSITSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|257898926|ref|ZP_05678579.1| transcriptional regulator [Enterococcus faecium Com15]
 gi|257836838|gb|EEV61912.1| transcriptional regulator [Enterococcus faecium Com15]
          Length = 253

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 34/151 (22%), Positives = 66/151 (43%), Gaps = 6/151 (3%)

Query: 41  LESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAE 100
           L+             A+E I ++   ++ TGIG SG +G+  A   ++    ++ +    
Sbjct: 91  LKKVNNESYHVVLDPAIELI-SLHDHLIFTGIGTSGTLGTYGARYFSNLQFNAYSITDPF 149

Query: 101 ASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
                 G+     L+IVLS SG + E+   +   +R+   +++IT++  S +A  +D  +
Sbjct: 150 IPVPTRGL--EKTLVIVLSVSGETGEVIKQIENFKRYGAKILSITNDQHSTIAQLSDCNI 207

Query: 161 TLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           +      S   G  PT +AI        +A+
Sbjct: 208 SYYMPDVS---GPDPTDNAINLTTQVPVIAL 235


>gi|194015326|ref|ZP_03053942.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Bacillus pumilus ATCC 7061]
 gi|194012730|gb|EDW22296.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Bacillus pumilus ATCC 7061]
          Length = 382

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 48/130 (36%), Gaps = 5/130 (3%)

Query: 202 NDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ 261
            +F       +          +M++      V+    L DAI I+ EKR   + VVDE  
Sbjct: 233 EEFIGKERLLQSNPNMERVEQMMNTSPVTITVEQ--TLTDAIYIMREKRVDSLLVVDEHD 290

Query: 262 KLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
            LKG I   DI            V +++      + E  LL   ++ +    I  + VVD
Sbjct: 291 VLKGYI---DIETIDANRRKAAFVGEILNTEFYTVQEGALLRDTVRKILIRGIKYVPVVD 347

Query: 322 DCQKAIGIVH 331
                 GIV 
Sbjct: 348 AKGHLKGIVT 357



 Score = 58.8 bits (141), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 24/123 (19%), Positives = 47/123 (38%), Gaps = 21/123 (17%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--------- 275
               +  +V +   + +AI +          V+ +  ++  + T  DI RN         
Sbjct: 182 QKTLNKTIVFVTHDMDEAIKLADR------IVILKDGEIVQVGTPEDILRNPANEFVEEF 235

Query: 276 ------FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                    + N   VE +M  +P  I  +  LT A+ ++R+  +  L+VVD+     G 
Sbjct: 236 IGKERLLQSNPNMERVEQMMNTSPVTITVEQTLTDAIYIMREKRVDSLLVVDEHDVLKGY 295

Query: 330 VHF 332
           +  
Sbjct: 296 IDI 298


>gi|304313936|ref|YP_003849083.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
 gi|302587395|gb|ADL57770.1| CBS domain containing protein [Methanothermobacter marburgensis
           str. Marburg]
          Length = 133

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 28/120 (23%), Positives = 48/120 (40%), Gaps = 3/120 (2%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           K   +             + +      +  A   +     G V VV E  +L G+IT  D
Sbjct: 5   KNNFMIRKLRARDIMLRDVIVANPEDLVAAANLKMVRANVGGVPVV-EDGRLVGLITHRD 63

Query: 272 IFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           I     + L  L V+D+M K+  V+ EDT ++   +++       L VV D    +G++ 
Sbjct: 64  ILLAGGEAL-KLRVKDIMSKDLVVVHEDTPISRISRIMADTGYQRLPVVKDDM-LVGLIT 121



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 13/60 (21%), Positives = 30/60 (50%), Gaps = 1/60 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           +  L   D+M+++  V   + L+  A   + + N+  + VV +  + +G++   D+L  G
Sbjct: 10  IRKLRARDIMLRDVIVANPEDLVAAANLKMVRANVGGVPVV-EDGRLVGLITHRDILLAG 68


>gi|293365898|ref|ZP_06612601.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus oralis ATCC 35037]
 gi|307702301|ref|ZP_07639259.1| putative HTH-type transcriptional regulator yfhH [Streptococcus
           oralis ATCC 35037]
 gi|291315576|gb|EFE56026.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus oralis ATCC 35037]
 gi|307624104|gb|EFO03083.1| putative HTH-type transcriptional regulator yfhH [Streptococcus
           oralis ATCC 35037]
          Length = 283

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 11/212 (5%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +    ++     HS   +   +  LRS    +     L          Q     + I  
Sbjct: 70  VFQYQHQASKPDTHSHKHSPLTKRVLRSYSIMREQTQDLIDE------EQLERVAQLIDD 123

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G G SG I  ++       G     +   +       ++  + L++  S SG
Sbjct: 124 AE-RVYFFGTGSSGLIAREMKLRFMRLGVVCEALTDRDGFAWTTSIMDENCLVLGFSLSG 182

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   L  A+      I  TS        + + VL       S    +   ++ +  
Sbjct: 183 TTQSVLDSLLDAKEMGAKTILFTSAPNKNSHAYTETVLVASHSQSSY---IQRISAQLPM 239

Query: 183 LAIGDAL-AIALLESRNFSENDFYVLHPGGKL 213
           L + D + A  L  +R+  E  F       KL
Sbjct: 240 LILIDLIYAYFLEINRDSKEKIFNSYWENKKL 271


>gi|227889350|ref|ZP_04007155.1| transcriptional regulator RpiR [Lactobacillus johnsonii ATCC 33200]
 gi|227850152|gb|EEJ60238.1| transcriptional regulator RpiR [Lactobacillus johnsonii ATCC 33200]
          Length = 272

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 38/186 (20%), Positives = 69/186 (37%), Gaps = 3/186 (1%)

Query: 5   FSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIK 64
           FS  K    +   +  + + + A  S     + L S     +  ++         + A  
Sbjct: 63  FSDLKIALAQDSMMTTSKSHEEAQTSSELSSKVLISSIEKTEELINPSVLKQAVSLLAKA 122

Query: 65  GRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSS 124
            R+ I G+G SG        T    G  +              ++++DDL++ LS SG +
Sbjct: 123 RRIHIFGLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKDDLVVGLSLSGHT 182

Query: 125 DELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            +    L  A+ +   +IAIT++  S +A   D+ L            +      + QL 
Sbjct: 183 KDTYDSLKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSEF---MNIGTVAGQVSQLY 239

Query: 185 IGDALA 190
           + D LA
Sbjct: 240 LCDVLA 245


>gi|87161602|ref|YP_495028.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|161510647|ref|YP_001576306.1| glycine betaine/choline ABC transporter ATP-binding protein
           [Staphylococcus aureus subsp. aureus USA300_TCH1516]
 gi|87127576|gb|ABD22090.1| glycine betaine/carnitine/choline ABC transporter ATP-binding
           protein [Staphylococcus aureus subsp. aureus
           USA300_FPR3757]
 gi|160369456|gb|ABX30427.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus USA300_TCH1516]
 gi|315197342|gb|EFU27679.1| glycine betaine/choline ABC superfamily ATP binding cassette
           transporter, ABC protein [Staphylococcus aureus subsp.
           aureus CGS01]
          Length = 408

 Score = 64.5 bits (156), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 245 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGI 304

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  S+ D M ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++      
Sbjct: 305 RG---HKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLIT----- 356

Query: 337 RFGII 341
           R  ++
Sbjct: 357 RANVV 361



 Score = 59.9 bits (144), Expect = 5e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 240 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE 298

Query: 334 DL 335
           D+
Sbjct: 299 DI 300


>gi|237858970|gb|ACR23666.1| inosine 5'-monophosphate dehydrogenase [Cryptococcus gattii]
          Length = 544

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/172 (19%), Positives = 54/172 (31%), Gaps = 16/172 (9%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
             P  S+ M     D +AIAL            ++H              V    +    
Sbjct: 80  NTPFLSSPMDTVTEDRMAIALALHGGLG-----IIHHNCSAEEQAAMVRRVKKYENGFIT 134

Query: 233 VK----IGCPLIDAITILSEKRFGCVAVVD---EGQKLKGIITEGDIFRNFHKDLNTLSV 285
                     + D + I ++  F  V + +      KL GI+T  D+            +
Sbjct: 135 DPLCLGPNATVGDVLEIKTKFGFCGVPITETGEPDSKLLGIVTGRDV----QFQDPETPI 190

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + VM            L  A  LLR+     L +VD     + +V   DLL+
Sbjct: 191 KSVMTTEVVTGTSPITLEKANSLLRETKKGKLPIVDSKGHLVSLVARSDLLK 242


>gi|306824759|ref|ZP_07458103.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
 gi|304432970|gb|EFM35942.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sp. oral taxon 071 str. 73H25AP]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 68/212 (32%), Gaps = 11/212 (5%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +    ++  +  HS   +   +  LRS    +     L          Q     + I  
Sbjct: 70  IFQYQHQASKQDIHSHKHSPLTKRVLRSYSIMREQTQDLIDE------EQLERVAQLIDD 123

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G G SG I  ++       G     +   +       ++  + L++  S SG
Sbjct: 124 AE-RVYFFGTGSSGLIAREMKLRFMRLGVVCEALTDRDGFAWTTSIMDENCLVLGFSLSG 182

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   L  A+      I  TS        + + VL       S    +   ++ +  
Sbjct: 183 TTQSVLDSLLDAKDMGAKTILFTSSPSKDCQAYTETVLVASHSQSSY---IQRISAQLPM 239

Query: 183 LAIGDAL-AIALLESRNFSENDFYVLHPGGKL 213
           L + D + A  L  +R   E  F       KL
Sbjct: 240 LFLTDLIYAYFLEINRESKEKIFNSYWENKKL 271


>gi|227830724|ref|YP_002832504.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus L.S.2.15]
 gi|227457172|gb|ACP35859.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Sulfolobus islandicus L.S.2.15]
          Length = 591

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRKSS-RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|156937291|ref|YP_001435087.1| signal-transduction protein [Ignicoccus hospitalis KIN4/I]
 gi|156566275|gb|ABU81680.1| putative signal-transduction protein with CBS domains [Ignicoccus
           hospitalis KIN4/I]
          Length = 261

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 4/126 (3%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                   ++  S+  V     L+DA  ++   +   + V D   ++ G+I   D+    
Sbjct: 6   RHYIKVTDYASKSVIKVLPADSLLDAANLMIRFKIRHLPVTDTEGRVIGLIGIRDVADAL 65

Query: 277 HK----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            K     L    V D M   P  + ED  L  A++L+ +  +  +++ DD     GI+  
Sbjct: 66  LKKGRERLEEEKVVDWMNDQPVKVSEDVSLHKAVELMLETGVGSIVITDDMDVIKGILSE 125

Query: 333 LDLLRF 338
            D+++F
Sbjct: 126 KDVVKF 131



 Score = 63.0 bits (152), Expect = 6e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 53/130 (40%), Gaps = 1/130 (0%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
            K          V    D    V     L  A+ ++ E   G + + D+   +KGI++E 
Sbjct: 67  KKGRERLEEEKVVDWMNDQPVKVSEDVSLHKAVELMLETGVGSIVITDDMDVIKGILSEK 126

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           D+ +      +  +V +V       +L  + +   ++L+ +     L V+    K +G++
Sbjct: 127 DVVKFLSVVPSIEAVANVASPISTYVLAGSSVREVLELMMELWSKHL-VMSREGKVVGVI 185

Query: 331 HFLDLLRFGI 340
             LDL++  +
Sbjct: 186 SMLDLVKKAL 195



 Score = 52.6 bits (125), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 17/60 (28%), Positives = 25/60 (41%), Gaps = 4/60 (6%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD----LLRFG 339
            V D   K+   +L    L  A  L+ +  I  L V D   + IG++   D    LL+ G
Sbjct: 10  KVTDYASKSVIKVLPADSLLDAANLMIRFKIRHLPVTDTEGRVIGLIGIRDVADALLKKG 69



 Score = 39.9 bits (92), Expect = 0.51,   Method: Composition-based stats.
 Identities = 17/106 (16%), Positives = 45/106 (42%), Gaps = 10/106 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           V  G  + + + ++ E  +    V+    K+ G+I+  D+ +   +D  +   +D + + 
Sbjct: 152 VLAGSSVREVLELMME-LWSKHLVMSREGKVVGVISMLDLVKKALEDGLSAPADDAVKRT 210

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMV--------VDDCQKAIGIV 330
            +V+  +  +++A  ++   N   L+V        V +     G +
Sbjct: 211 -EVLPPEAPISLAAAIMVSKNKEALLVGRKEPDSIVTEKNMVRGAL 255


>gi|331265933|ref|YP_004325563.1| phosphosugar-binding transcriptional regulator [Streptococcus
           oralis Uo5]
 gi|326682605|emb|CBZ00222.1| phosphosugar-binding transcriptional regulator [Streptococcus
           oralis Uo5]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 67/212 (31%), Gaps = 11/212 (5%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +    ++     HS   +   +  LRS    +     L          Q     + I  
Sbjct: 70  VFQYQHQASKPDTHSHKHSPLTKRVLRSYSIMREQTQDLIDE------EQLERVAQLIDD 123

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G G SG I  ++       G     +   +       ++  + L++  S SG
Sbjct: 124 AE-RVYFFGTGSSGLIAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENCLVLGFSLSG 182

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   L  A+      I  TS        + + VL       S    +   ++ +  
Sbjct: 183 TTQSVLDSLLDAKEMGAKTILFTSAPNKNSQAYNETVLVASHSQSSY---IQRISAQLPM 239

Query: 183 LAIGDAL-AIALLESRNFSENDFYVLHPGGKL 213
           L + D + A  L  +R   E  F       KL
Sbjct: 240 LILIDLIYAYFLEINRESKEKIFNSYWENKKL 271


>gi|301107764|ref|XP_002902964.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262098082|gb|EEY56134.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 438

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/118 (20%), Positives = 46/118 (38%), Gaps = 19/118 (16%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVMIKNPK 294
            + DA+  + E+  G + V    + + GI+TE DI +             V +VM  +  
Sbjct: 126 TVHDAVLTMVERNIGSLIVTKAQEGIVGIVTERDILKKISPRTVMTEEKFVHNVMSSHIM 185

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVV--------------DDCQKAIGIVHFLDLLRF 338
            I   T +  A+  + + NI  L VV              ++  + +  +   D++R 
Sbjct: 186 CIHPSTTVIDALATMTKENIRHLAVVSGDMTSAVKRGSVQEEDMRCV--LSITDIVRA 241



 Score = 62.6 bits (151), Expect = 9e-08,   Method: Composition-based stats.
 Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH---KDLNTLSVEDVMIKN 292
              + +A+  ++++ FG V VVD+ Q++ GI TE D  R      KD   L V DVM   
Sbjct: 325 NITVAEAVEEMAKRDFGAVLVVDKEQRVLGIFTERDYIRKVLFEVKDPTKLLVTDVMSTV 384

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVV-----DDCQKAIGIVHFLDLL 336
             V+  +  L     L    N     V+     D  ++  GI+   D++
Sbjct: 385 DSVLQIEDPLEKCWDLAATSNCRHFPVIGVLRQDREKELAGILSIKDIV 433



 Score = 38.0 bits (87), Expect = 2.2,   Method: Composition-based stats.
 Identities = 14/73 (19%), Positives = 34/73 (46%), Gaps = 8/73 (10%)

Query: 266 IITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           ++T   + +  HK      V+ ++   P    ++  +  A++ + + +   ++VVD  Q+
Sbjct: 300 VVTAATLLKKKHK-----RVKLILNTRP---DDNITVAEAVEEMAKRDFGAVLVVDKEQR 351

Query: 326 AIGIVHFLDLLRF 338
            +GI    D +R 
Sbjct: 352 VLGIFTERDYIRK 364



 Score = 38.0 bits (87), Expect = 2.3,   Method: Composition-based stats.
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            I     +  A+  + + NI  L+V    +  +GIV   D+L+ 
Sbjct: 120 SIAGTETVHDAVLTMVERNIGSLIVTKAQEGIVGIVTERDILKK 163


>gi|225851155|ref|YP_002731389.1| nucleotidyl transferase [Persephonella marina EX-H1]
 gi|225645730|gb|ACO03916.1| nucleotidyl transferase [Persephonella marina EX-H1]
          Length = 354

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/99 (23%), Positives = 41/99 (41%), Gaps = 4/99 (4%)

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR-NFHKDLNTLSVEDVM 289
             +K    + +A+  L       + V +E  +L G +T+GDI R           V+DV 
Sbjct: 5   IFIKPENTITEALKKLDRTSEKVLLVTNEKDELIGALTDGDIRRYILRTGKIEGFVKDVY 64

Query: 290 IKNPKVILEDTLLTV--AMQLLRQHNISVLMVVDDCQKA 326
             NP  I ED  +      +++    I ++ V+D  +  
Sbjct: 65  NPNPIFIYEDE-IDETRIKEIMVGKKIELIPVLDRKKHV 102


>gi|217072712|gb|ACJ84716.1| unknown [Medicago truncatula]
          Length = 432

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 22/133 (16%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL-KGIITEGDI-----FRNFHKD 279
           +   I  V    P++ A   + +KR G V V+  G     G I+  D+         + D
Sbjct: 273 TPKQIIKVYEDEPVLQAFKEMRKKRVGGVPVIKRGGTTAVGNISLRDVQFLLTAPEIYHD 332

Query: 280 LNTLSVEDV----------------MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
             T++V+D                 M         D  +   +QLL +  I  + VVDD 
Sbjct: 333 YRTITVKDFLTSVRSYLEKNKNAFPMSSEFITCKRDCTVKELIQLLDKEQIHRVYVVDDD 392

Query: 324 QKAIGIVHFLDLL 336
               G++   D++
Sbjct: 393 GNLEGLITLRDII 405



 Score = 42.6 bits (99), Expect = 0.089,   Method: Composition-based stats.
 Identities = 17/84 (20%), Positives = 31/84 (36%), Gaps = 5/84 (5%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
             + R  +  DF        + +      +           K  C + + I +L +++  
Sbjct: 330 YHDYRTITVKDFLTS-----VRSYLEKNKNAFPMSSEFITCKRDCTVKELIQLLDKEQIH 384

Query: 253 CVAVVDEGQKLKGIITEGDIFRNF 276
            V VVD+   L+G+IT  DI    
Sbjct: 385 RVYVVDDDGNLEGLITLRDIISRL 408



 Score = 39.5 bits (91), Expect = 0.80,   Method: Composition-based stats.
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 13/54 (24%)

Query: 296 ILEDTLLTVAMQLLRQHNISVLMVVDDC--------QKAIGIVHFLDLLRFGII 341
           I  D  L  A+++L +HNI    VVD           + IGIV F      GI+
Sbjct: 73  IKSDATLAEAVKILARHNILSAPVVDVDAPEDATWIDRYIGIVEF-----AGIV 121


>gi|189208536|ref|XP_001940601.1| inosine-5'-monophosphate dehydrogenase IMD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
 gi|187976694|gb|EDU43320.1| inosine-5'-monophosphate dehydrogenase IMD2 [Pyrenophora
           tritici-repentis Pt-1C-BFP]
          Length = 545

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           A++ L  P           P  S+ M       +AI +            V+H       
Sbjct: 67  AEVALDTPITKRISL--KTPFVSSPMDTVTEHNMAIHIALLGGLG-----VIHHNCSQDD 119

Query: 216 LFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L    +     + +A  +     FG   V + G    KL GIIT
Sbjct: 120 QAEMVRKVKRFENGFILDPVVISPTTTVGEAKALKERWGFGGFPVTENGTLRSKLVGIIT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +   D     V  VM  +         L  A  +L +     L +VD+    I 
Sbjct: 180 PRDIQFH---DKLEDPVTAVMSTDLVTARHGVELKEANDILNKSKKGKLPIVDESFNLIA 236

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 237 LLSRSDLMK 245


>gi|229581716|ref|YP_002840115.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus Y.N.15.51]
 gi|228012432|gb|ACP48193.1| glucosamine/fructose-6-phosphateamino transferase, isomerizing
           [Sulfolobus islandicus Y.N.15.51]
          Length = 591

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I+    R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEIRKSS-RIIVTAAGTSYHAGFYFSLLLARKGYMSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|186471769|ref|YP_001863087.1| CBS domain-containing protein [Burkholderia phymatum STM815]
 gi|184198078|gb|ACC76041.1| CBS domain containing protein [Burkholderia phymatum STM815]
          Length = 150

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/119 (26%), Positives = 51/119 (42%), Gaps = 9/119 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ----KLKGIITEGDIF---RNFHK 278
               +     G  +++A  I+     G +  V+  Q    + +GI+T+ DI         
Sbjct: 7   CTREVITCPSGTTVLEACKIMRANHVGDIVAVEATQEGQVRPRGILTDRDIVIEVLAREV 66

Query: 279 DLNTLSVEDVMIKNPKVILEDT-LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           D   L V DVM  +P V+  D   +    + +R H I  + VVD   + +G+V   DLL
Sbjct: 67  DAAKLFVHDVMS-SPLVVSYDWEDVWQVAKRMRLHAIRRMPVVDKAGELVGVVSLDDLL 124



 Score = 38.0 bits (87), Expect = 2.1,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 4/58 (6%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ----KAIGIVHFLDLL 336
           +   D+  +        T +  A +++R +++  ++ V+  Q    +  GI+   D++
Sbjct: 1   MKAGDICTREVITCPSGTTVLEACKIMRANHVGDIVAVEATQEGQVRPRGILTDRDIV 58


>gi|289433497|ref|YP_003463369.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|289169741|emb|CBH26277.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           seeligeri serovar 1/2b str. SLCC3954]
 gi|313635244|gb|EFS01544.1| inosine-5'-monophosphate dehydrogenase [Listeria seeligeri FSL
           N1-067]
          Length = 502

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 64/180 (35%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++     KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTANGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFDKLVTANKATTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKD 214


>gi|229585256|ref|YP_002843758.1| glucosamine--fructose-6-phosphate aminotransferase [Sulfolobus
           islandicus M.16.27]
 gi|228020306|gb|ACP55713.1| glucosamine--fructose-6-phosphate amino transferase, isomerizing
           [Sulfolobus islandicus M.16.27]
          Length = 591

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 9/149 (6%)

Query: 40  SLESSLQGELS--FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +++ ++ G LS   +     E+I     R+++T  G S H G   +  LA  G  S  + 
Sbjct: 268 AVKDTISGLLSEIDKVSEIAEEISESS-RIIVTAAGTSYHAGFYFSLLLARKGYTSIPLI 326

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
           A+E  H     + + D++I +S SG + ++K  +   +     +IA+T+  +S +A  +D
Sbjct: 327 ASE-YHNF--RVKKGDIVIAISQSGETLDVKMGIRKFKEEGAKIIALTNVIESDIARESD 383

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIG 186
             L +   PE    G+A T +   ++A  
Sbjct: 384 YKLYMRAGPE---IGVAATKTFTSEIASL 409


>gi|219121444|ref|XP_002185946.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
 gi|209582795|gb|ACI65416.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
          Length = 682

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/166 (19%), Positives = 61/166 (36%), Gaps = 18/166 (10%)

Query: 192 ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKI----GCPLIDAITILS 247
           AL    +FS+ D +V     K     V  S+V+ +  S   V         + +AI    
Sbjct: 97  ALKTPIDFSKEDEHVEERKRK-RLSEVRISEVLQAKHSYRWVDPVIPRTATVQEAIVTTI 155

Query: 248 EKRFGCVAVVDEG--QKLKGIITEGDIFRNFH---------KDLNTLSVEDVMIK--NPK 294
           E       V+++    ++ G+IT  D+ R            +++    V D M       
Sbjct: 156 EGGLSGAMVLEDEHHNRVCGLITSRDLLRIMASGVKEGDTPEEIMNRLVGDYMTPISQVV 215

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
               D  + +   ++ +  I  L ++    +  G+V   D+  FG+
Sbjct: 216 YGRPDETVGMCRTIMARLGIKCLPILSREGRVEGLVTARDMSDFGL 261


>gi|331698600|ref|YP_004334839.1| CBS domain-containing protein [Pseudonocardia dioxanivorans CB1190]
 gi|326953289|gb|AEA26986.1| CBS domain containing protein [Pseudonocardia dioxanivorans CB1190]
          Length = 513

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/107 (23%), Positives = 44/107 (41%), Gaps = 18/107 (16%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDLNTL-------- 283
           V       +   +L E+    V V+ EG  L G++TE D+  R   +D + L        
Sbjct: 25  VAPDTSFDEVTRVLVERGIRAVPVL-EGGVLVGVVTEADLVRRAEQRDPDRLGAPGWSVH 83

Query: 284 --------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDD 322
                   +  DVM      +L+D  +  A + +R  ++  L V+D+
Sbjct: 84  DARTDRPTTAADVMSTPAIYVLQDASVAEAARRMRIRSVGWLPVLDE 130



 Score = 49.5 bits (117), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           L    V +VM  +   +  DT      ++L +  I  + V+ +    +G+V   DL+R
Sbjct: 9   LRRTLVREVMTTDVVSVAPDTSFDEVTRVLVERGIRAVPVL-EGGVLVGVVTEADLVR 65


>gi|307269157|ref|ZP_07550514.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|306514535|gb|EFM83093.1| SIS domain protein [Enterococcus faecalis TX4248]
 gi|315032109|gb|EFT44041.1| SIS domain protein [Enterococcus faecalis TX0017]
 gi|315035372|gb|EFT47304.1| SIS domain protein [Enterococcus faecalis TX0027]
          Length = 200

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 11/184 (5%)

Query: 15  GHSLMKNSTVQCALRSIIAE-----KRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVV 68
           G S +K +  + A ++   E        + +    L  E  ++    A++ I   +  V 
Sbjct: 5   GFSELKYAVKEEAKQTQTFENFYDTTVHVDAFLKKLNQETYYEMLRPAIQMIVQAR-HVA 63

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
            TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG ++E+ 
Sbjct: 64  FTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGETNEMI 121

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIG 186
             +   +     +++IT+   S +A  AD  ++  +P E          TT+ I  +A+ 
Sbjct: 122 KQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALI 181

Query: 187 DALA 190
           + LA
Sbjct: 182 ELLA 185


>gi|171320666|ref|ZP_02909683.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
 gi|171094096|gb|EDT39187.1| CBS domain containing membrane protein [Burkholderia ambifaria
           MEX-5]
          Length = 143

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/117 (19%), Positives = 44/117 (37%), Gaps = 4/117 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNF-HKDLNTL 283
               +  V     +  A  ++     G + V D  + L  ++T+ D+  R   H      
Sbjct: 8   MSRDVVCVAPTDTIRHAAQLMQRFDIGVLPVCDRNE-LVAVVTDRDLAVRALSHGHSPDT 66

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL-LRFG 339
            V+ V     +  +ED  +    Q +    +  + V+D   + +GIV   D+  R G
Sbjct: 67  PVKAVASAPVQWCVEDDGVGDVQQRMADLQLHRMPVLDAKHQIVGIVSLGDIATRAG 123



 Score = 46.8 bits (110), Expect = 0.004,   Method: Composition-based stats.
 Identities = 13/51 (25%), Positives = 26/51 (50%), Gaps = 1/51 (1%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           V ++M ++   +     +  A QL+++ +I VL V D  +  + +V   DL
Sbjct: 4   VNEIMSRDVVCVAPTDTIRHAAQLMQRFDIGVLPVCDRNE-LVAVVTDRDL 53


>gi|167551337|ref|ZP_02345092.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
 gi|205323907|gb|EDZ11746.1| transcriptional regulator, RpiR family [Salmonella enterica subsp.
           enterica serovar Saintpaul str. SARA29]
          Length = 277

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/157 (19%), Positives = 61/157 (38%), Gaps = 5/157 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   ++ E   Q   AV  +      + + G+ +S  + S L   L      +F
Sbjct: 123 SQVLQQLPVQIKNE---QLDAAVNLLAKADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M++ DD++I +S+S  + E+  ++    +     IAIT    S +A
Sbjct: 179 LIDGIGGMFSEQLSMVSPDDVVIAISYSPYAQEVVELVELGAKRGAHHIAITDSQVSPLA 238

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
             +++   + +           +      LA+  ALA
Sbjct: 239 AFSEVCFVVREAQVDGFRSQVASMCLAQTLAVSLALA 275


>gi|91776006|ref|YP_545762.1| hexulose-6-phosphate isomerase [Methylobacillus flagellatus KT]
 gi|91709993|gb|ABE49921.1| 3-hexulose-6-phosphate isomerase [Methylobacillus flagellatus KT]
          Length = 181

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 12/176 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           ++ L + +           +  + A  GR  + G G+S  +    A  L   G     V 
Sbjct: 9   VNKLTNVINNTAEGYDDKILSMVDAA-GRTFLGGAGRSLLVSRFFAMRLVHAGYQVSMVG 67

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      I   DL IV+S SGS++ L  ++  A+     +I I+ + +S +A  AD
Sbjct: 68  EVVTP-----SIQAGDLFIVISGSGSTETLMPLVRKAKSQGAKVIVISMKAQSPMAELAD 122

Query: 158 IVLTLP---KEPESCPHGLAPTTSAIMQLA--IGDALAIALLESRNFSENDFYVLH 208
           +V+ +           HG+ P  +          +A    L++ +  +E     +H
Sbjct: 123 LVVPIGGNDAHAFDKTHGM-PMGTIFELSTLWFLEATIAKLIDQKGLTEEGMRAIH 177


>gi|329929685|ref|ZP_08283377.1| DRTGG domain protein [Paenibacillus sp. HGF5]
 gi|328935948|gb|EGG32405.1| DRTGG domain protein [Paenibacillus sp. HGF5]
          Length = 397

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D+ H       +K    + +   I  E       V DE  ++ GI+   D+
Sbjct: 143 IKKKIMLVEDIAHDKPKNHQLKNSVTVQEFKRISQETGENRYPVTDEWNRVIGIVGVRDV 202

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    T  +E  M +NP      T L  A Q++    I  L +VD  +K +  V  
Sbjct: 203 ----EGLAETQPIEKAMTRNPVTASMKTSLASAAQIMMWEGIDFLPIVDRNRKLLATVTR 258

Query: 333 LDLLRF 338
            ++L  
Sbjct: 259 KEVLGA 264


>gi|326388957|ref|ZP_08210539.1| D-fructose-6-phosphate amidotransferase [Novosphingobium
           nitrogenifigens DSM 19370]
 gi|326206557|gb|EGD57392.1| D-fructose-6-phosphate amidotransferase [Novosphingobium
           nitrogenifigens DSM 19370]
          Length = 607

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/210 (20%), Positives = 78/210 (37%), Gaps = 9/210 (4%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFF 95
            +L S L+          ++   A   RV I   G S   G +        A    P   
Sbjct: 265 QTLRSYLRRYEQVVSLPQIDFDLASIRRVTIVACGTSYYAGMVAKYWFERFARL--PVDI 322

Query: 96  VHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
             A+E  + D  ++    L + +S SG + +  A L + +     +  + +   S +A  
Sbjct: 323 DVASEFRYRD-PVLEPGGLALFISQSGETADTLAALRHCKAAGQTIAVVVNVPTSSMARE 381

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           AD++L     PE    G+A T +   QLA+  ALA+ L   R    ++         + T
Sbjct: 382 ADLLLPTHAGPE---IGVASTKAFTCQLAVLAALAVHLAVKRGLITHEEEAQIVDQLVET 438

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITI 245
                + + H  +   +  +  P  D + +
Sbjct: 439 PAALNAALAHDEEIAAMAPLIAPARDVLYL 468


>gi|256830737|ref|YP_003159465.1| CBS domain-containing protein [Desulfomicrobium baculatum DSM 4028]
 gi|256579913|gb|ACU91049.1| CBS domain containing protein [Desulfomicrobium baculatum DSM 4028]
          Length = 417

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/125 (20%), Positives = 46/125 (36%), Gaps = 21/125 (16%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV--------- 285
              PL   +  L       V +VD  + + GII + D+ + F +  +   V         
Sbjct: 284 PDAPLAGVLEQLVASALRRVVIVDADKTILGIIHDWDLLQCFVRQNSPTLVARLLGILTQ 343

Query: 286 ------------EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                       E+VM +    +  D  L+  +Q+L    +  L+V D     +G+V   
Sbjct: 344 RETEPAALEGIAEEVMSREVLTVGPDAPLSEVIQILMDKKVKRLVVADQKGHLLGMVDRD 403

Query: 334 DLLRF 338
            +L+ 
Sbjct: 404 VILKA 408



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 33/149 (22%), Positives = 56/149 (37%), Gaps = 25/149 (16%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGC--PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
           G         +    +  +V +G   PL + + +L  +    V V+ E  +L GIIT GD
Sbjct: 102 GQAIFHLPMRIRDVMTEQVVTVGTQTPLDEVVELLLRREVKAVPVM-EAGRLVGIITGGD 160

Query: 272 IF-------------------RNFHK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLL 309
           +                    R+ H    +   L   D+M      +   T +T A++++
Sbjct: 161 LLARARMPLRLDMHGHVPTDLRHKHSHCIEFEGLRARDIMSAPVTTLNITTTVTDALKMM 220

Query: 310 RQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
              NI  L V  +    +GIV   D+L  
Sbjct: 221 AARNIKRLPVTSEDGTLMGIVSRTDVLAA 249



 Score = 53.0 bits (126), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 46/109 (42%), Gaps = 12/109 (11%)

Query: 241 DAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------DLNTLSVE------DV 288
           DA+ +++ +    + V  E   L GI++  D+     +       L+ L         DV
Sbjct: 215 DALKMMAARNIKRLPVTSEDGTLMGIVSRTDVLAAIGRTSAVAAHLDVLPAGMHACARDV 274

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +  N      D  L   ++ L    +  +++VD  +  +GI+H  DLL+
Sbjct: 275 LYTNVPTAAPDAPLAGVLEQLVASALRRVVIVDADKTILGIIHDWDLLQ 323


>gi|160940047|ref|ZP_02087392.1| hypothetical protein CLOBOL_04936 [Clostridium bolteae ATCC
           BAA-613]
 gi|158436627|gb|EDP14394.1| hypothetical protein CLOBOL_04936 [Clostridium bolteae ATCC
           BAA-613]
          Length = 302

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/162 (19%), Positives = 66/162 (40%), Gaps = 4/162 (2%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            R +S L+ +L+     +   A   I +  G+V +  +  S  + + L + L   G    
Sbjct: 124 TRTISYLDDALKHISPSEIIKAAGMICSA-GQVAVYYVENSATVANDLVTKLLYLGINCV 182

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
             +         G +   D+ I +S+SG+S     ++  A+R     I +T+ +  ++  
Sbjct: 183 TYNDVYLQQISAGNLGEQDVAIGISYSGTSKSTVDVMKLAKRKGASTIVLTNYDDVLIGK 242

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +ADI+L      +   +      S   Q+A+ D +   ++  
Sbjct: 243 YADIMLCTGNRQQLYGN---AIFSRTSQIAVVDMIYTGIILR 281


>gi|254228679|ref|ZP_04922103.1| CBS domain pair protein [Vibrio sp. Ex25]
 gi|151938858|gb|EDN57692.1| CBS domain pair protein [Vibrio sp. Ex25]
          Length = 212

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/138 (17%), Positives = 52/138 (37%), Gaps = 12/138 (8%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F +         + +   + M + +   L++    L DA +++       + VVD    L
Sbjct: 50  FSIFKRRTMPLEVSMIKVEDMMTRNPHTLLRTHT-LRDAKSMMDALDIRHIPVVDANNHL 108

Query: 264 KGIITEGDIFRNFHKDLN----------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           +G++T+ DI       L+             + ++M  N         L  +   +++H 
Sbjct: 109 QGLVTQRDILAAQESSLHPDEAEQSFTLDTPLYEMMHTNIMTAEPIAGLKESAIYMQKHK 168

Query: 314 ISVLMVVDDCQKAIGIVH 331
           +  L VV    + +GI+ 
Sbjct: 169 VGCLPVVTK-GRLVGIIT 185



 Score = 61.8 bits (149), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 18/66 (27%), Positives = 31/66 (46%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R    +++ + VED+M +NP  +L    L  A  ++   +I  + VVD      G+V  
Sbjct: 55  RRTMPLEVSMIKVEDMMTRNPHTLLRTHTLRDAKSMMDALDIRHIPVVDANNHLQGLVTQ 114

Query: 333 LDLLRF 338
            D+L  
Sbjct: 115 RDILAA 120


>gi|148978597|ref|ZP_01815024.1| inosine monophosphate dehydrogenase-related protein [Vibrionales
           bacterium SWAT-3]
 gi|145962263|gb|EDK27545.1| inosine monophosphate dehydrogenase-related protein [Vibrionales
           bacterium SWAT-3]
          Length = 138

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/109 (22%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 235 IGCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVM 289
              PL  A+  ++S    G   V+D+ +++ G ++E D+     K      +T  V D M
Sbjct: 19  PDMPLSLALDKVMSSHHMGG-PVIDDNEQVIGFLSEQDLLEKLVKVSYFCQDTHIVGDCM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    +  D  +     +++        V+D+ QK +GI+   D+LR 
Sbjct: 78  YQEVLSVAPDLSIIELADMMQVGKPKAYPVIDN-QKLVGIITRTDVLRA 125



 Score = 48.4 bits (114), Expect = 0.002,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++++ V+D M +       D  L++A+ +++  H++    V+DD ++ IG +   DLL
Sbjct: 1   MHSIKVKDYMTQQVVTFTPDMPLSLALDKVMSSHHMGG-PVIDDNEQVIGFLSEQDLL 57



 Score = 39.9 bits (92), Expect = 0.52,   Method: Composition-based stats.
 Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     +I+   ++   +     V+D  QKL GIIT  D+ R   K+L+ 
Sbjct: 84  VAPDLSIIELADMMQVGKPKAYPVID-NQKLVGIITRTDVLRAIGKNLDE 132


>gi|91784469|ref|YP_559675.1| RpiR family transcriptional regulator [Burkholderia xenovorans
           LB400]
 gi|91688423|gb|ABE31623.1| transcriptional regulator, RpiR family [Burkholderia xenovorans
           LB400]
          Length = 278

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/185 (21%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + S +   L
Sbjct: 102 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVASYIVYAL 157

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 158 QHT------PKRVHLVSGFGGMYREQIRSVKKGDVVIAISFAPYGKETQYCLRVAHHHQA 211

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 212 RTLVITDSQLSPLARYATTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 264

Query: 199 FSEND 203
            +  +
Sbjct: 265 LNVEE 269


>gi|72161349|ref|YP_289006.1| CBS domain-containing protein [Thermobifida fusca YX]
 gi|71915081|gb|AAZ54983.1| CBS domain protein [Thermobifida fusca YX]
          Length = 144

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/115 (22%), Positives = 53/115 (46%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
             + +  ++    L+ A  ++ +   G + +  E  +LKGIIT+ DI        KD NT
Sbjct: 8   MHEGVQCIETNTNLVTAARMMRDLGVGALPICGEDNRLKGIITDRDIVVKCLAEGKDPNT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  ++    P  +     +   +Q + QH +  + V+ + ++ +GIV   DL +
Sbjct: 68  CNAIELAEGTPFYVDASDDIETLLQEMTQHKVKRMPVI-ENKQLVGIVSEADLAQ 121



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 11/54 (20%), Positives = 27/54 (50%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            + +D+M +  + I  +T L  A +++R   +  L +  +  +  GI+   D++
Sbjct: 2   TTAKDIMHEGVQCIETNTNLVTAARMMRDLGVGALPICGEDNRLKGIITDRDIV 55


>gi|302556791|ref|ZP_07309133.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
 gi|302474409|gb|EFL37502.1| CBS domain-containing protein [Streptomyces griseoflavus Tu4000]
          Length = 231

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/126 (19%), Positives = 44/126 (34%), Gaps = 22/126 (17%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-------------------- 273
               P ++    L+ ++   V VVD G  + G+++E D+                     
Sbjct: 2   PGDMPFVEVARTLAREQLSAVPVVDAGDHVIGVVSESDLLAKAAVMTEPHRHGPVGRLWQ 61

Query: 274 -RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + K     +   +M   P  +     ++ A        +  L V D   + +G+V  
Sbjct: 62  HRLYDKSHGD-TAATLMTFPPVTVHPAERVSDAAWAAAHARLRRLPVTDHRGRLVGVVSR 120

Query: 333 LDLLRF 338
            DLLR 
Sbjct: 121 RDLLRA 126



 Score = 37.2 bits (85), Expect = 3.4,   Method: Composition-based stats.
 Identities = 12/61 (19%), Positives = 22/61 (36%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     + DA    +  R   + V D   +L G+++  D+ R   +D   +  
Sbjct: 77  MTFPPVTVHPAERVSDAAWAAAHARLRRLPVTDHRGRLVGVVSRRDLLRALIRDDAEIRA 136

Query: 286 E 286
           E
Sbjct: 137 E 137


>gi|221212149|ref|ZP_03585127.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD1]
 gi|221168234|gb|EEE00703.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD1]
          Length = 311

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 6/167 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI      LS+L  +++         AV  I+  + +V   G G S  + +     L + 
Sbjct: 132 SIRTGVDALSALSGAIE---IAALDKAVASIQQAR-QVFAFGAGPSATVAADAVFRLRAV 187

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  +  +    ++     ++   D++I +S +G +    A+   A      L+A+T++  
Sbjct: 188 GVTTVGIPDYLSAMIAARLLGPGDVVIAVSSTGRTSSTLAVADAASSAGATLVAVTNQYG 247

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + +A  ADI L +   P   P  +A   S + QL + DAL  AL   
Sbjct: 248 TPLANLADIALVVGGAPL--PAQMAAAGSRLAQLVVIDALVAALALR 292


>gi|205372288|ref|ZP_03225102.1| magnesium (Mg2+) transporter [Bacillus coahuilensis m4-4]
          Length = 452

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 9/116 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNFHKDL 280
             +    +K    + DAI  L            + VVDE +KL G+++  D+      D 
Sbjct: 140 MTNRFVWIKQDYTVRDAIDKLKSFAEFAETINYLYVVDERRKLVGVVSYRDLLIAGIDDH 199

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               + D+M +    +   T    A +L+ +++ + + VVDD    IGI+   D++
Sbjct: 200 ----IHDIMYERVISVTAYTDQEEAAKLIERYDFNAIPVVDDYYTLIGIITVDDII 251



 Score = 49.1 bits (116), Expect = 0.001,   Method: Composition-based stats.
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 5/62 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +   +M      I +D  +  A+  L+        I+ L VVD+ +K +G+V + DLL  
Sbjct: 135 TAGRLMTNRFVWIKQDYTVRDAIDKLKSFAEFAETINYLYVVDERRKLVGVVSYRDLLIA 194

Query: 339 GI 340
           GI
Sbjct: 195 GI 196


>gi|154687110|ref|YP_001422271.1| AcuB [Bacillus amyloliquefaciens FZB42]
 gi|154352961|gb|ABS75040.1| AcuB [Bacillus amyloliquefaciens FZB42]
          Length = 214

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 40/120 (33%), Gaps = 9/120 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
               +  V     +  A+  +       + V+D+   + GI+T+ DI +           
Sbjct: 7   MKRDVITVSKHDSIETAVRKMKIYHIRHLPVIDDELHVIGIVTDRDIKQAGPGSFEQKER 66

Query: 284 ------SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  VE +M +N         +        +H I  L +     K  GI+   D+LR
Sbjct: 67  GAFLTNKVETIMKRNVICAHPLDFVEEISASFYEHGIGCLPIT-VNHKLTGILTKTDVLR 125



 Score = 58.0 bits (139), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 14/55 (25%), Positives = 29/55 (52%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
            E +M ++   + +   +  A++ ++ ++I  L V+DD    IGIV   D+ + G
Sbjct: 3   AEQIMKRDVITVSKHDSIETAVRKMKIYHIRHLPVIDDELHVIGIVTDRDIKQAG 57


>gi|326799230|ref|YP_004317049.1| nucleotidyl transferase [Sphingobacterium sp. 21]
 gi|326549994|gb|ADZ78379.1| Nucleotidyl transferase [Sphingobacterium sp. 21]
          Length = 348

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/113 (23%), Positives = 51/113 (45%), Gaps = 6/113 (5%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSE-KRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-T 282
                  L+  G  +  A+  L        + VV+E  +L G +T+GD+ R   K  +  
Sbjct: 1   MRNYRDHLILSGSSIKSALIQLDILASDAIMFVVNEHDQLIGSLTDGDVRRGLIKGYSID 60

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLL--RQHNISVLMVVDDCQKAIGIVHFL 333
             V+D++  NPK I +        +++  R+ +  +L +VD   K + +++F 
Sbjct: 61  QPVDDIIQPNPKYIKKGN--ADIERIISYREGSFRILPIVDSENKIVNVINFR 111


>gi|257866740|ref|ZP_05646393.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC30]
 gi|257872743|ref|ZP_05652396.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC10]
 gi|257876332|ref|ZP_05655985.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC20]
 gi|257800698|gb|EEV29726.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC30]
 gi|257806907|gb|EEV35729.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC10]
 gi|257810498|gb|EEV39318.1| glycine betaine/L-proline transporter ATP-binding subunit
           [Enterococcus casseliflavus EC20]
          Length = 391

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I    I RN  K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIHLMREKRVDTLLVTDNSNVLKGYIDVESIDRNRGK---VTSVGDILNKD 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E  LL   +Q + +  +  + VVD  +  +GI+ 
Sbjct: 319 VFFVRETALLRDTLQRILKRGLKYVPVVDADKHLVGILT 357



 Score = 56.4 bits (135), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ ++ E ++  A     ++ LP+E                Q  IG   A+A  +    
Sbjct: 102 KLLKVSQEERNKTAERMIDLVELPREMLDRYPNELSGGQ---QQRIGVVRALAADQDVIL 158

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +  F  L P              +       +V +   + +A+ + S        V+  
Sbjct: 159 MDEPFGALDP--ITRDSLQDLVKDLQERLGKTVVFVTHDMDEALKLASR------IVIMS 210

Query: 260 GQKLKGIITEGDIF---------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
             K+    T  +I                R      +T  V+DVM+  P  I  +  L  
Sbjct: 211 EGKVIQFDTPENILQHPATPFVEELIGEDRLLQAKPDTTPVKDVMLNTPIAITPEKSLQE 270

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIV 330
           A+ L+R+  +  L+V D+     G +
Sbjct: 271 AIHLMREKRVDTLLVTDNSNVLKGYI 296


>gi|167766324|ref|ZP_02438377.1| hypothetical protein CLOSS21_00828 [Clostridium sp. SS2/1]
 gi|317499648|ref|ZP_07957908.1| rpiR family Helix-turn-helix domain-containing protein
           [Lachnospiraceae bacterium 5_1_63FAA]
 gi|167712043|gb|EDS22622.1| hypothetical protein CLOSS21_00828 [Clostridium sp. SS2/1]
 gi|291558967|emb|CBL37767.1| Transcriptional regulators [butyrate-producing bacterium SSC/2]
 gi|316893062|gb|EFV15284.1| rpiR family Helix-turn-helix domain-containing protein
           [Lachnospiraceae bacterium 5_1_63FAA]
          Length = 282

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/160 (16%), Positives = 61/160 (38%), Gaps = 3/160 (1%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  ++++       +    V+ I      +    +G +  I    +      G  +    
Sbjct: 107 VEEIKATFHNFNPEELREIVDLIIHA-NLIEFAAMGDTIPIALDGSYKFNQLGLKAVSST 165

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
             E+       + + D+   +S SG+S  L  ++   +   +  IAIT+++KS +A   D
Sbjct: 166 IWESQEAFSRTLRKGDVFFAISASGASKRLVKMVEIVKDNGVTTIAITNQSKSPLAELCD 225

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESR 197
            VL            ++ T   +  +++ D L + L  ++
Sbjct: 226 HVLLTATREHIFHDQVSFT--RMAAMSVIDTLFLLLFSTK 263


>gi|28378581|ref|NP_785473.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|300768104|ref|ZP_07078009.1| RpiR family phosphosugar-binding transcriptional regulator
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
 gi|28271417|emb|CAD64322.1| transcription regulator [Lactobacillus plantarum WCFS1]
 gi|300494168|gb|EFK29331.1| RpiR family phosphosugar-binding transcriptional regulator
           [Lactobacillus plantarum subsp. plantarum ATCC 14917]
          Length = 237

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/94 (22%), Positives = 45/94 (47%), Gaps = 2/94 (2%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDE 126
           V+  GIG SG +    A    + G  +F +  +        +   D ++  LS SG + E
Sbjct: 114 VIFVGIGSSGSLARYAARCFTNAGKVAFGLEDSNYPVNTFEI--HDTVVFALSESGETPE 171

Query: 127 LKAILYYARRFSIPLIAITSENKSVVACHADIVL 160
           L  ++ + ++    +++IT++++S +A  +D   
Sbjct: 172 LIVLVQHFQQRRCAVLSITNQSQSTLAKLSDWNF 205


>gi|332981253|ref|YP_004462694.1| glutamine--fructose-6-phosphate transaminase [Mahella australiensis
           50-1 BON]
 gi|332698931|gb|AEE95872.1| glutamine--fructose-6-phosphate transaminase [Mahella australiensis
           50-1 BON]
          Length = 606

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 10/175 (5%)

Query: 28  LRSIIAEKRGL-SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGH---IGSKLA 83
           L+ I  + + L  ++ S +  +LS   H   +      G++ I   G + H   +G  L 
Sbjct: 253 LKEIHEQPKALRDTMASRIAHDLSINLHDLDDIDIEKAGKLFIVACGTAYHAGVVGKYLI 312

Query: 84  STLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIA 143
             +A    P     A+E       +I++ DL IV+S SG + +  A L   +R    +IA
Sbjct: 313 ERMARL--PVEVDIASE-FRYRQPIISKGDLAIVISQSGETADTLAALRELKRQGATVIA 369

Query: 144 ITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           I +   S +   A+ VL     PE     +A T +   QL +   +A+ + + R 
Sbjct: 370 IANVVGSTITREANKVLYTWAGPEIA---VASTKAYTTQLLVITMIALYMAKRRG 421


>gi|330802860|ref|XP_003289430.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
 gi|325080472|gb|EGC34026.1| hypothetical protein DICPUDRAFT_92298 [Dictyostelium purpureum]
          Length = 196

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 4/88 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVV-DEGQKLKGIITEGDIF---RNFHKDL 280
               +I  +K    +  AI  + +   G + V  ++   L GI TE D         KD 
Sbjct: 109 KHEKNIIFIKENDTIYQAIKEMDKHGIGALLVTSEKDGSLIGIFTERDYLGKVALLDKDS 168

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQL 308
            T  V + M +N   I E T +  AM L
Sbjct: 169 KTTKVSEAMTRNVTTICEKTGVVEAMHL 196



 Score = 38.7 bits (89), Expect = 1.2,   Method: Composition-based stats.
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVV-DDCQKAIGIVHFLDLL 336
           KN   I E+  +  A++ + +H I  L+V  +     IGI    D L
Sbjct: 112 KNIIFIKENDTIYQAIKEMDKHGIGALLVTSEKDGSLIGIFTERDYL 158


>gi|304405049|ref|ZP_07386709.1| putative signal transduction protein with CBS domains
           [Paenibacillus curdlanolyticus YK9]
 gi|304345928|gb|EFM11762.1| putative signal transduction protein with CBS domains
           [Paenibacillus curdlanolyticus YK9]
          Length = 203

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 7/103 (6%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--TLSVEDVMI 290
           V     + DA+  L       + VV+E QK  GI+T  D+ +    + +  T+ V  VM 
Sbjct: 81  VPETYSVHDAVVTLYMANADTLLVVNEQQKFVGIVTPKDLLKVTLGNPSAGTIPVSMVMT 140

Query: 291 KNP--KVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIGI 329
           + P       +  +  A+  +  H ++ L VV  D      GI
Sbjct: 141 RYPNIVTASPEDAVADAISKMLAHQVNCLPVVIPDGNGAP-GI 182


>gi|227888574|ref|ZP_04006379.1| RpiR family transcriptional regulator [Escherichia coli 83972]
 gi|227834413|gb|EEJ44879.1| RpiR family transcriptional regulator [Escherichia coli 83972]
 gi|307555963|gb|ADN48738.1| transcriptional regulator [Escherichia coli ABU 83972]
          Length = 281

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 6/209 (2%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQ--CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           H   +  K V    +S  +N+      +L + + +K+    L  S Q   +      ++ 
Sbjct: 68  HLKIALAKEVINPDNSYPENTDFSDITSLATFLLKKQA-EDLIQSTQFFNAEVLESILKL 126

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +      +     G S  +    A   +  G  +    + E        + + DL I +S
Sbjct: 127 LANCDT-IFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDLAIGIS 185

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SGS++ +  I    +      + IT+  KS ++  +   L             A  ++ 
Sbjct: 186 NSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAV--SDKIFFEAFDSTR 243

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLH 208
           +  + + D L +  +         +    
Sbjct: 244 VPAMGVIDMLVLLFMYKNKAHYEKYRTSE 272


>gi|227518083|ref|ZP_03948132.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis TX0104]
 gi|227074519|gb|EEI12482.1| phosphosugar-binding transcriptional regulator [Enterococcus
           faecalis TX0104]
          Length = 269

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/197 (17%), Positives = 75/197 (38%), Gaps = 10/197 (5%)

Query: 9   KSVTRKGHSLMKNSTVQCAL-RSIIAEKRGLSSLESSLQGELSFQFHCAVE-------KI 60
           K +  +G   +K + VQ     S  ++ R   ++   L   +   F    E       K+
Sbjct: 72  KHLGYRGFQELKYAIVQSVQSESTESDSRSFQAITQQLIANVQDSFQQMDEAKVAEMLKM 131

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
                 + + G+G S  I +  A  L   G  ++     +     +  +   DL I +S+
Sbjct: 132 IECANTIEVFGVGGSFPICTDFARKLTFLGKKAYARSDWDEQAAAVKNLDGQDLAIFVSY 191

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           +G +  + A    A+   +P+I++ S   S +   +   L    +  +  H     +S I
Sbjct: 192 TGETKGILAYARVAQEQQVPMISLISTKGSTLEKLSTTTLFA--KGTTRYHQRVDLSSRI 249

Query: 181 MQLAIGDALAIALLESR 197
             + + D + +   E++
Sbjct: 250 AVICLFDTVLLMYAEAK 266


>gi|37693733|gb|AAQ98876.1| 5'AMP activated gamma subunit [Dictyostelium discoideum]
          Length = 225

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/111 (17%), Positives = 47/111 (42%), Gaps = 8/111 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL--------S 284
           V+   PL   I ++++     + ++D    L  I+T+  +       +  +         
Sbjct: 76  VESTAPLKIGIDLMTKWGVHRLPIIDSEGTLISILTQSRVVEYIQNHIQNINGLDKAIGQ 135

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           +++    +   I +D ++  A +L+ ++ IS + VV+     IG +   D+
Sbjct: 136 LKEFGTSSVISIKQDRMVIDAFRLMHENGISAVPVVNQIGILIGNISVSDM 186


>gi|325567163|ref|ZP_08143830.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Enterococcus casseliflavus
           ATCC 12755]
 gi|325158596|gb|EGC70742.1| glycine betaine/L-proline ABC superfamily ATP binding cassette
           transporter, ABC protein [Enterococcus casseliflavus
           ATCC 12755]
          Length = 391

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +AI ++ EKR   + V D    LKG I    I RN  K     SV D++ K+
Sbjct: 262 ITPEKSLQEAIHLMREKRVDTLLVTDNSNVLKGYIDVESIDRNRGK---VTSVGDILNKD 318

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + E  LL   +Q + +  +  + VVD  +  +GI+ 
Sbjct: 319 VFFVRETALLRDTLQRILKRGLKYVPVVDADKHLVGILT 357



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 37/206 (17%), Positives = 69/206 (33%), Gaps = 26/206 (12%)

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF 199
            L+ ++ E ++  A     ++ LP+E                Q  IG   A+A  +    
Sbjct: 102 KLLKVSQEERNKTAERMIDLVELPREMLDRYPNELSGGQ---QQRIGVVRALAADQDVIL 158

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDE 259
            +  F  L P              +       +V +   + +A+ + S        V+  
Sbjct: 159 MDEPFGALDP--ITRDSLQDLVKDLQERLGKTVVFVTHDMDEALKLASR------IVIMS 210

Query: 260 GQKLKGIITEGDIF---------------RNFHKDLNTLSVEDVMIKNPKVILEDTLLTV 304
             K+    T  +I                R      +T  V+DVM+  P  I  +  L  
Sbjct: 211 EGKVIQFDTPENILQHPATPFVEELIGEDRLLQAKPDTTPVKDVMLNTPIAITPEKSLQE 270

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIV 330
           A+ L+R+  +  L+V D+     G +
Sbjct: 271 AIHLMREKRVDTLLVTDNSNVLKGYI 296


>gi|325970924|ref|YP_004247115.1| hypothetical protein SpiBuddy_1096 [Spirochaeta sp. Buddy]
 gi|324026162|gb|ADY12921.1| putative signal transduction protein with CBS domains [Spirochaeta
           sp. Buddy]
          Length = 308

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/103 (20%), Positives = 47/103 (45%), Gaps = 1/103 (0%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNP 293
                L     I+ EK+   + +V  G++L GI++  DI +   K       +D M +N 
Sbjct: 36  SKDTTLRQIQYIMREKQVTGLPIVV-GKRLIGIVSMDDIIQALDKGYIEEKAQDHMTRNL 94

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            V+ +D  ++ A+    + +     V++  ++ +G++   D+ 
Sbjct: 95  IVLEDDMPISFAISYFDRFSYHRFPVLNKHKELVGMITSRDIT 137



 Score = 56.1 bits (134), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 1/59 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L V+DVM  +     +DT L     ++R+  ++ L +V   ++ IGIV   D+++ 
Sbjct: 19  IYRLKVKDVMTTDLVTASKDTTLRQIQYIMREKQVTGLPIV-VGKRLIGIVSMDDIIQA 76


>gi|330932572|ref|XP_003303830.1| hypothetical protein PTT_16197 [Pyrenophora teres f. teres 0-1]
 gi|311319923|gb|EFQ88079.1| hypothetical protein PTT_16197 [Pyrenophora teres f. teres 0-1]
          Length = 545

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/189 (20%), Positives = 60/189 (31%), Gaps = 17/189 (8%)

Query: 156 ADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGT 215
           A++ L  P           P  S+ M       +AI +            V+H       
Sbjct: 67  AEVALDTPITKRISL--KTPFVSSPMDTVTEHNMAIHIALLGGLG-----VIHHNCSQDD 119

Query: 216 LFVCASDVMHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                  V    +   L    +     + +A  +     FG   V + G    KL GIIT
Sbjct: 120 QAEMVRKVKRFENGFILDPVVISPTTTVGEAKALKERWGFGGFPVTENGTLRSKLVGIIT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +   D     V  VM  +         L  A  +L +     L +VD+    I 
Sbjct: 180 PRDIQFH---DKLEDPVTAVMSTDLVTARHGVELKEANDILNKSKKGKLPIVDESFNLIA 236

Query: 329 IVHFLDLLR 337
           ++   DL++
Sbjct: 237 LLSRSDLMK 245


>gi|26250579|ref|NP_756619.1| hypothetical protein c4760 [Escherichia coli CFT073]
 gi|218692109|ref|YP_002400321.1| hypothetical protein ECED1_4518 [Escherichia coli ED1a]
 gi|300985643|ref|ZP_07177530.1| SIS domain protein [Escherichia coli MS 45-1]
 gi|301047278|ref|ZP_07194364.1| SIS domain protein [Escherichia coli MS 185-1]
 gi|26111009|gb|AAN83193.1|AE016769_308 Hypothetical protein c4760 [Escherichia coli CFT073]
 gi|218429673|emb|CAR10494.1| conserved hypothetical protein [Escherichia coli ED1a]
 gi|300300797|gb|EFJ57182.1| SIS domain protein [Escherichia coli MS 185-1]
 gi|300408027|gb|EFJ91565.1| SIS domain protein [Escherichia coli MS 45-1]
 gi|315293183|gb|EFU52535.1| SIS domain protein [Escherichia coli MS 153-1]
 gi|320197644|gb|EFW72256.1| Sialic acid utilization regulator, RpiR family [Escherichia coli
           WV_060327]
 gi|324007503|gb|EGB76722.1| SIS domain protein [Escherichia coli MS 57-2]
          Length = 281

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/209 (14%), Positives = 69/209 (33%), Gaps = 6/209 (2%)

Query: 2   HFYFSHFKSVTRKGHSLMKNSTVQ--CALRSIIAEKRGLSSLESSLQGELSFQFHCAVEK 59
           H   +  K V    +S  +N+      +L + + +K+    L  S Q   +      ++ 
Sbjct: 68  HLKIALAKEVINPDNSYPENTDFSDITSLATFLLKKQA-EDLIQSTQFFNAEVLESILKL 126

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +      +     G S  +    A   +  G  +    + E        + + DL I +S
Sbjct: 127 LANCDT-IFFFAAGNSNPLAVYGAYKFSQLGLKTVVHVSPEMQINAAYSMGKRDLAIGIS 185

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SGS++ +  I    +      + IT+  KS ++  +   L             A  ++ 
Sbjct: 186 NSGSTNLMVDIFKVVKERGAKSVCITNYIKSPLSKLSTHQLNTAV--SDKIFFEAFDSTR 243

Query: 180 IMQLAIGDALAIALLESRNFSENDFYVLH 208
           +  + + D L +  +         +    
Sbjct: 244 VPAMGVIDMLVLLFMYKNKAHYEKYRTRE 272


>gi|323483977|ref|ZP_08089350.1| hypothetical protein HMPREF9474_01099 [Clostridium symbiosum
           WAL-14163]
 gi|323693425|ref|ZP_08107637.1| transcriptional regulator [Clostridium symbiosum WAL-14673]
 gi|323402693|gb|EGA95018.1| hypothetical protein HMPREF9474_01099 [Clostridium symbiosum
           WAL-14163]
 gi|323502518|gb|EGB18368.1| transcriptional regulator [Clostridium symbiosum WAL-14673]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/199 (16%), Positives = 69/199 (34%), Gaps = 8/199 (4%)

Query: 5   FSHFKSVTRKGHSLMKNSTV--QCALRSIIAEKRGLSS-----LESSLQGELSFQFHCAV 57
           F   K    +  S    ++V    + R I    + + +     +  ++           +
Sbjct: 67  FHQLKMTLARELSEESQASVGNDISRRDIGQSLQNILANKTEEIRQTVAMMDPENLDRIL 126

Query: 58  EKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIV 117
           + I+  +  V +  +G +  +    A      G P+      E        + + D+II 
Sbjct: 127 DIIQKAR-MVQLVAVGNTIPVALDAAFKFNQLGIPAATGTILETQTAYAFNLGKKDVIIA 185

Query: 118 LSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTT 177
           +S SG S  L  IL  A    + +I+IT+  +S VA  +D  +T     +        + 
Sbjct: 186 ISNSGVSRRLIRILEGASGNGVTVISITNNPESPVAKLSDYHITTATREKLLREDFLFSR 245

Query: 178 SAIMQLAIGDALAIALLES 196
                +     L +++   
Sbjct: 246 VPATMVIEILYLLLSVSIR 264


>gi|261408721|ref|YP_003244962.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus sp. Y412MC10]
 gi|261285184|gb|ACX67155.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus sp. Y412MC10]
          Length = 444

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D+ H       +K    + +   I  E       V DE  ++ GI+   D+
Sbjct: 190 IKKKIMLVEDIAHDKPKNHQLKNSVTVQEFKRISQETGENRYPVTDEWNRVIGIVGVRDV 249

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    T  +E  M +NP      T L  A Q++    I  L +VD  +K +  V  
Sbjct: 250 ----EGLAETQPIEKAMTRNPVTASMKTSLASAAQIMMWEGIDFLPIVDRNRKLLATVTR 305

Query: 333 LDLLRF 338
            ++L  
Sbjct: 306 KEVLGA 311


>gi|162451567|ref|YP_001613934.1| hypothetical protein sce3295 [Sorangium cellulosum 'So ce 56']
 gi|161162149|emb|CAN93454.1| hypothetical protein sce3295 [Sorangium cellulosum 'So ce 56']
          Length = 263

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/141 (19%), Positives = 48/141 (34%), Gaps = 29/141 (20%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  ++    L D   +L       + VVD   K  G+++  D+ R   +  +T   
Sbjct: 106 MTKDVICIRTEVSLDDITALLVRHEISGMPVVDAAGKPVGMVSRADVLRAADERGDTEES 165

Query: 283 --------------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISV 316
                                     ++  DVM      + E   +  A  L+    +  
Sbjct: 166 RRVASRSGEVAPLEMSQGFHVYEPVRVTARDVMTPVVVQLHESASIRQAASLMAYEGVHR 225

Query: 317 LMVVDDCQKAIGIVHFLDLLR 337
           L VV D  K +GI+  LD+LR
Sbjct: 226 LPVVSDDGKVVGILSSLDVLR 246



 Score = 59.5 bits (143), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 269 EGDIFRNFHKDLN---TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK 325
           E D  RN   D+       + ++M K+   I  +  L     LL +H IS + VVD   K
Sbjct: 83  ESDPLRNAGVDVAVNPEAPLAEIMTKDVICIRTEVSLDDITALLVRHEISGMPVVDAAGK 142

Query: 326 AIGIVHFLDLLRF 338
            +G+V   D+LR 
Sbjct: 143 PVGMVSRADVLRA 155



 Score = 37.2 bits (85), Expect = 3.3,   Method: Composition-based stats.
 Identities = 12/75 (16%), Positives = 29/75 (38%), Gaps = 8/75 (10%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           F+V  P           +        +  +     +  A ++++ +    + VV +  K+
Sbjct: 184 FHVYEPV--------RVTARDVMTPVVVQLHESASIRQAASLMAYEGVHRLPVVSDDGKV 235

Query: 264 KGIITEGDIFRNFHK 278
            GI++  D+ R F +
Sbjct: 236 VGILSSLDVLRWFGR 250


>gi|111225196|ref|YP_715990.1| hypothetical protein FRAAL5840 [Frankia alni ACN14a]
 gi|111152728|emb|CAJ64472.1| Conserved hypothetical protein [Frankia alni ACN14a]
          Length = 128

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/108 (21%), Positives = 44/108 (40%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNTLSVEDVM 289
           ++  G  L  A  +++ ++ G   V D   +  GI+TE DI R+    +D +     D +
Sbjct: 13  MIGPGHTLRQAARLMAARKVGAAVVHDADSQGYGILTERDILRSIAAEQDPDVEIAGDHL 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            ++         L  A   + +     L+V        GI+   D++R
Sbjct: 73  TRDVVFADPAWSLDDAAAAMLRGGFRHLIVTSGGG-VAGILSMRDVVR 119



 Score = 39.5 bits (91), Expect = 0.83,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 23/55 (41%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V + M     +I     L  A +L+    +   +V D   +  GI+   D+LR
Sbjct: 1   MRVSEGMSSLVLMIGPGHTLRQAARLMAARKVGAAVVHDADSQGYGILTERDILR 55


>gi|86740673|ref|YP_481073.1| RpiR family transcriptional regulator [Frankia sp. CcI3]
 gi|86567535|gb|ABD11344.1| transcriptional regulator, RpiR family [Frankia sp. CcI3]
          Length = 299

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 3/158 (1%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           S+L  + +      F  AV+ ++    RV++ G G S  +    A    + G  +     
Sbjct: 124 SALSETTRTVDRAAFTRAVDALQ-CADRVLLIGAGTSAPLAQDAAYRFRTLGLLAEAPAD 182

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
           A   H    ++      + +S +G + E  A    AR      IA+TS  +S +   AD+
Sbjct: 183 AHVQHVAARLLPPASACLAISHTGQTRETLAGAAAARAAGATTIALTSFFRSPLTRLADV 242

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
            L       +        +S I+   + DAL +A+  +
Sbjct: 243 ALVAGSSETNYRVEA--MSSRIIHATVLDALFVAVHLA 278


>gi|139438917|ref|ZP_01772377.1| Hypothetical protein COLAER_01381 [Collinsella aerofaciens ATCC
           25986]
 gi|133775628|gb|EBA39448.1| Hypothetical protein COLAER_01381 [Collinsella aerofaciens ATCC
           25986]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 66/177 (37%), Gaps = 7/177 (3%)

Query: 19  MKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHI 78
           M +S  +   + + +  R + +   +L   +         ++K  +  V + GIG S  +
Sbjct: 92  MDDSVERIVGKVMKSNVRTIEATARTLDYTV---LERCAARLKRARA-VNLFGIGASRLV 147

Query: 79  GSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
              LA  L                      +   D+ I  S+SG + E+      A+R +
Sbjct: 148 AHDLAQKLMRVDKECRLYDDWHDQLLCAKNMHEGDMAIAFSYSGLTQEVLDCTAEAQRHN 207

Query: 139 IPLIAITS-ENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALL 194
            P++A+T  +  S +A  AD VL                 S + QL + DAL  A +
Sbjct: 208 CPVVAVTKVDGSSKLATMADAVL--GVAASEPLVRSGAMASRMAQLMVVDALYAAYV 262


>gi|282896002|ref|ZP_06304033.1| Cl- channel, voltage gated [Raphidiopsis brookii D9]
 gi|281199112|gb|EFA73982.1| Cl- channel, voltage gated [Raphidiopsis brookii D9]
          Length = 626

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/119 (15%), Positives = 42/119 (35%), Gaps = 15/119 (12%)

Query: 227 GDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK-------- 278
                 +     +++A   +         V+D  +KL GI++  DI R   +        
Sbjct: 482 HFHPKKIPANLSVLEAALEMIHDHVPSALVIDANEKLVGIVSLDDINRTLSRWENYQTPS 541

Query: 279 -----DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQK--AIGIV 330
                D    ++ D+   +     +D  L+ A+  +    +  L V+D       +G++
Sbjct: 542 EQLKPDFFGQTILDICTTDILYAWQDEPLSEALDRMALRGLQQLPVLDRHNPDCIVGLL 600



 Score = 43.3 bits (101), Expect = 0.053,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 29/58 (50%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + T SV + +  +PK I  +  +  A   +   ++   +V+D  +K +GIV   D+ R
Sbjct: 472 IQTTSVAEAIHFHPKKIPANLSVLEAALEMIHDHVPSALVIDANEKLVGIVSLDDINR 529


>gi|302870621|ref|YP_003839258.1| CBS domain-containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315506858|ref|YP_004085745.1| signal transduction protein with cbs domains [Micromonospora sp.
           L5]
 gi|302573480|gb|ADL49682.1| CBS domain containing protein [Micromonospora aurantiaca ATCC
           27029]
 gi|315413477|gb|ADU11594.1| putative signal transduction protein with CBS domains
           [Micromonospora sp. L5]
          Length = 130

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/108 (20%), Positives = 44/108 (40%), Gaps = 3/108 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK--DLNTLSVEDVM 289
           +V     L  A  ++S +  G   V+D   +  GI+TE D+ +      D +       +
Sbjct: 13  VVGPEHTLRQAARMMSARGVGSAVVIDPDSEGVGIMTERDVLKAIGAGLDPDVERTGAHL 72

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             +      D  +  A   + +     L+V+D  ++  G++   DL+R
Sbjct: 73  TWDVVYAGPDWTVEEAAAAMARGGFRHLVVLD-GREVAGVISVRDLMR 119



 Score = 41.8 bits (97), Expect = 0.14,   Method: Composition-based stats.
 Identities = 11/56 (19%), Positives = 26/56 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V + M     V+  +  L  A +++    +   +V+D   + +GI+   D+L+ 
Sbjct: 1   MQVREAMSSEVLVVGPEHTLRQAARMMSARGVGSAVVIDPDSEGVGIMTERDVLKA 56


>gi|172065448|ref|YP_001816160.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Burkholderia ambifaria MC40-6]
 gi|171997690|gb|ACB68607.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
           [Burkholderia ambifaria MC40-6]
          Length = 837

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 1/110 (0%)

Query: 228 DSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVED 287
               +V     L + I  +  +R   + V  +  +  GI+TE DI R         +V  
Sbjct: 143 HPPVVVPEQATLHEVIARMRAQRLDAILVGYDDGE-HGILTERDIVRLLADGGADGAVGA 201

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              K  +++     L  A + + +HN+  + + D+  +  G++ F D+L+
Sbjct: 202 YASKPLQMLTAKQSLYAAQRFMTEHNMRHVGIQDEGGRLTGLLCFADVLQ 251



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 3/105 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
                P+ +    +  +R   + VV + +++ GI TE D         +    V +VM  
Sbjct: 21  CAPATPVREVARRMFAERCSSI-VVMKDEQVVGIWTEHDALSAGDNPRDLDRPVSEVMSH 79

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               I  +T L  A    +Q  +   +VV     AIG++   D++
Sbjct: 80  PVLTIEANTPLGEAALKFKQSGVRHFVVV-RDGTAIGVLTQTDIV 123


>gi|159906128|ref|YP_001549790.1| signal transduction protein [Methanococcus maripaludis C6]
 gi|159887621|gb|ABX02558.1| putative signal transduction protein with CBS domains
           [Methanococcus maripaludis C6]
          Length = 126

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/105 (27%), Positives = 55/105 (52%), Gaps = 5/105 (4%)

Query: 238 PLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVMIKNP 293
            L +A  +++ K    V V      + G+IT  D+   F +    +L  ++++DV  K  
Sbjct: 19  SLFEAFKVMNHKGVKRVFVRITEN-IDGVITYRDLAHLFFEKGVFELMDITLKDVSTKEI 77

Query: 294 KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             I E+  +T A Q++   ++S L+V+D+ + AIG++   D+LR 
Sbjct: 78  LTIDENADVTHAAQMMLHADVSGLLVIDEQKNAIGVISQTDILRA 122


>gi|320139155|gb|EFW31037.1| glycine betaine/L-proline transport ATP binding subunit
           [Staphylococcus aureus subsp. aureus MRSA131]
 gi|320142591|gb|EFW34399.1| glycine betaine/L-proline transport ATP binding subunit
           [Staphylococcus aureus subsp. aureus MRSA177]
          Length = 423

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 260 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGI 319

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  S+ D M ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++      
Sbjct: 320 RG---HKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLIT----- 371

Query: 337 RFGII 341
           R  ++
Sbjct: 372 RANVV 376



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 255 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE 313

Query: 334 DL 335
           D+
Sbjct: 314 DI 315


>gi|262048850|ref|ZP_06021731.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus D30]
 gi|259163108|gb|EEW47669.1| glycine betaine/carnitine/choline ABC transporter opuCA
           [Staphylococcus aureus D30]
          Length = 410

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 247 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGI 306

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  S+ D M ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++      
Sbjct: 307 RG---HKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLIT----- 358

Query: 337 RFGII 341
           R  ++
Sbjct: 359 RANVV 363



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 242 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE 300

Query: 334 DL 335
           D+
Sbjct: 301 DI 302


>gi|163784388|ref|ZP_02179280.1| magnesium (Mg2+) transporter-like protein [Hydrogenivirga sp.
           128-5-R1-1]
 gi|159880343|gb|EDP73955.1| magnesium (Mg2+) transporter-like protein [Hydrogenivirga sp.
           128-5-R1-1]
          Length = 455

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/85 (23%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
           + VVDE ++L G+++     R          V+D+M+++   + ED      + L ++++
Sbjct: 173 IYVVDEKERLVGVVS----LRELLVSPPNTQVKDIMVRDVISVREDATKDEVIDLFKRYD 228

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L VVD+  K +G+++  D++  
Sbjct: 229 LYALPVVDENDKLVGVIYIDDVIDA 253


>gi|312136474|ref|YP_004003811.1| signal transduction protein with cbs domains [Methanothermus
           fervidus DSM 2088]
 gi|1084272|pir||S41583 yhcV homolog - Methanothermus fervidus
 gi|311224193|gb|ADP77049.1| putative signal transduction protein with CBS domains
           [Methanothermus fervidus DSM 2088]
          Length = 135

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/120 (22%), Positives = 54/120 (45%), Gaps = 9/120 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL-- 283
              ++  V     ++ A   L + +   + VV +  KL GI+T  D+  N   D   L  
Sbjct: 11  MTKNVITVDPEEDVVFAFEKLMKNKISALPVV-KKGKLLGIVTATDLGHNLILDKYKLGT 69

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLLRF 338
            V+++M+K+   +  +  L   ++ + +H      I+ L VV +  +  GI+   D++R 
Sbjct: 70  KVKEIMVKDVVCVSPNDTLADVVKKMYEHGDKDEIINQL-VVKENDEIKGIISDGDIIRA 128



 Score = 60.7 bits (146), Expect = 3e-07,   Method: Composition-based stats.
 Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
              + V+DVM KN   +  +  +  A + L ++ IS L VV    K +GIV   DL
Sbjct: 2   WENIKVKDVMTKNVITVDPEEDVVFAFEKLMKNKISALPVV-KKGKLLGIVTATDL 56



 Score = 39.9 bits (92), Expect = 0.55,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 4/55 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFG----CVAVVDEGQKLKGIITEGDIFRNF 276
               +  V     L D +  + E           VV E  ++KGII++GDI R  
Sbjct: 75  MVKDVVCVSPNDTLADVVKKMYEHGDKDEIINQLVVKENDEIKGIISDGDIIRAL 129


>gi|87311445|ref|ZP_01093565.1| CBS-domain-containing protein [Blastopirellula marina DSM 3645]
 gi|87285857|gb|EAQ77771.1| CBS-domain-containing protein [Blastopirellula marina DSM 3645]
          Length = 278

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/117 (17%), Positives = 49/117 (41%), Gaps = 13/117 (11%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT----------- 282
            +   L + +  +    F    V+D+ +++ GI+++ D+ R      +            
Sbjct: 24  SLDTTLEELLEQVYMVGFHHWPVIDDDRRVVGIVSDEDVVRTAAMHESAHMSNRFRDARG 83

Query: 283 -LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + + + M      I  DT ++ A+Q++ +  ++ L V +D  +   +V   D LR 
Sbjct: 84  PIRITEFMSTKVYAISYDTDVSAALQMMLEKGVNSLPVTEDD-RLSAMVTSSDFLRE 139



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 27/154 (17%), Positives = 55/154 (35%), Gaps = 24/154 (15%)

Query: 200 SENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCV-AVVD 258
           + +DF  L            A+   +   +   V     + +    ++ +  G + AVV 
Sbjct: 132 TSSDF--LREFSFSEHDACHAAVTTYLDLTPVQVPFDSSIEEV--KMACEAEGAIYAVVM 187

Query: 259 EGQKLKGIITEGDIFRNFHKDLNTLSVEDVM--IKNPKVILEDTLLTV------------ 304
            G    G+I+  DI R   +DL       VM   ++PK I    ++              
Sbjct: 188 NGDFPLGVISRRDIRRAKSRDLAR-----VMYLSEDPKSIRATDIIRESHSILPTDTMRN 242

Query: 305 AMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           A + ++   +  L+V +     +G++    +L  
Sbjct: 243 AARTMQNMQLQALVVSNRQNDLVGVLTQEQILHA 276



 Score = 37.6 bits (86), Expect = 2.6,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 39/113 (34%), Gaps = 11/113 (9%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI-- 290
           +     +  A+ ++ EK    + V  E  +L  ++T  D  R F    +      V    
Sbjct: 98  ISYDTDVSAALQMMLEKGVNSLPVT-EDDRLSAMVTSSDFLREFSFSEHDACHAAVTTYL 156

Query: 291 -KNPKVILEDTLLTVAMQLLR---QHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
              P  +  D+ +      +    +  I    VV +    +G++   D+ R  
Sbjct: 157 DLTPVQVPFDSSIEEV--KMACEAEGAIYA--VVMNGDFPLGVISRRDIRRAK 205


>gi|95931324|ref|ZP_01314039.1| Polynucleotide adenylyltransferase region [Desulfuromonas
           acetoxidans DSM 684]
 gi|95132625|gb|EAT14309.1| Polynucleotide adenylyltransferase region [Desulfuromonas
           acetoxidans DSM 684]
          Length = 880

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 2/101 (1%)

Query: 237 CPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVI 296
             L  A  +L+      + VV EG +LKG IT   + R  H  L+T +V D M      +
Sbjct: 325 AALSKARDLLTRYNINALLVV-EGAELKGYITRQTVERAIHHGLSTSAVRDYMSTEFGRV 383

Query: 297 LEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
             DT L+   QL+ +     + VVD     +G++   DLLR
Sbjct: 384 APDTELSQVQQLIVEQRQRFVPVVD-GHAVVGVITRADLLR 423



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
            V     L     ++ E+R   V VVD G  + G+IT  D+ R+ 
Sbjct: 382 RVAPDTELSQVQQLIVEQRQRFVPVVD-GHAVVGVITRADLLRHL 425


>gi|330890592|gb|EGH23253.1| RpiR family transcriptional regulator [Pseudomonas syringae pv.
           mori str. 301020]
          Length = 288

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/178 (17%), Positives = 58/178 (32%), Gaps = 7/178 (3%)

Query: 21  NSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGS 80
           +S    +L+        L  +  +L          AV  +     RV   G G SG + +
Sbjct: 89  DSVADYSLKIFDTTLHTLMEVRENLDP---HALQMAVTAMAGA-NRVEFYGFGASGAVAA 144

Query: 81  KLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIP 140
                       +               +   D+ + +S SG S +L       R     
Sbjct: 145 DAQHKFFRLLLTAAAYSDPHMQAMSAVTLKPTDVAVCISQSGRSKDLLITPNLVRESGAT 204

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
           LI +       +A  + + L +    ++  +   P TS I  L + D LA+ +  +R 
Sbjct: 205 LITLCPSQT-PLAELSSVNLAIDVHEDTEIY--TPLTSRIAHLVVIDVLAMGVAMARG 259


>gi|209519282|ref|ZP_03268083.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
 gi|209500294|gb|EEA00349.1| transcriptional regulator, RpiR family [Burkholderia sp. H160]
          Length = 294

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 38/185 (20%), Positives = 67/185 (36%), Gaps = 25/185 (13%)

Query: 27  ALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTL 86
           A   I A + GL  LE+ L      QF  AV+ ++     + + G+ +S  + + +   L
Sbjct: 118 AREFIAASRGGLEELEAGLD---DKQFDAAVKMLQQADN-IYVIGVRRSFPVANYIVYAL 173

Query: 87  ASTGTPSFFVHAAEASHGDLGM-------ITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             T              G  GM       + + D++I +S++    E +  L  A     
Sbjct: 174 QHTHKR------VHLVSGFGGMYREQIRSVRKGDVVIAISFAPYGKETQYCLRVAHHHQA 227

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA-IMQLAIGDALAIALLESRN 198
             + IT    S +A +A   L +         G A    +    + +  AL IAL     
Sbjct: 228 KTLVITDSQLSPLARYASTQLYV-------KEGSAFAFRSLTSTICLCQALFIALAYKLE 280

Query: 199 FSEND 203
            +  +
Sbjct: 281 LNVEE 285


>gi|193211750|ref|YP_001997703.1| glucosamine--fructose-6-phosphate aminotransferase [Chlorobaculum
           parvum NCIB 8327]
 gi|193085227|gb|ACF10503.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Chlorobaculum parvum NCIB 8327]
          Length = 614

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)

Query: 57  VEKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDD 113
           ++++K  K R+VI   G S H   IG  L    A    P    +A+E       ++T DD
Sbjct: 293 LDRLKQAK-RIVICACGTSWHAGLIGEYLIEEYAR--IPVEVDYASE-FRYRNPIVTADD 348

Query: 114 LIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGL 173
           ++IV+S SG + +  A L  A+     ++ I +   S +A      +     PE    G+
Sbjct: 349 VVIVISQSGETADTLAALRLAKEKGALVMGICNVVGSTIARETLCGMYTHAGPEV---GV 405

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
           A T +   Q+ +   LA+AL + R  S+ +  + 
Sbjct: 406 ASTKAFTAQVIVLFMLAMALSKGRTISQEEIKLN 439


>gi|229578264|ref|YP_002836662.1| glutamine amidotransferase class-II [Sulfolobus islandicus
           Y.G.57.14]
 gi|229583029|ref|YP_002841428.1| glutamine amidotransferase class-II [Sulfolobus islandicus
           Y.N.15.51]
 gi|228008978|gb|ACP44740.1| glutamine amidotransferase class-II [Sulfolobus islandicus
           Y.G.57.14]
 gi|228013745|gb|ACP49506.1| glutamine amidotransferase class-II [Sulfolobus islandicus
           Y.N.15.51]
          Length = 584

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  ++      I      V + G G S H G       +  G     V AAE  +  L
Sbjct: 263 NSLMEKYLSLASMILYGAKNVYVIGNGTSLHAGLISTYYFSEIGLNVNVVSAAEFPYYAL 322

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             +T   +II +S SG + ++   +  A++    ++ IT+   S +A  +++ L +   P
Sbjct: 323 ENVTTGSVIIAISQSGETSDVIRSVKMAKQRGAVILGITNSVGSRLALESNVYLPITAGP 382

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI 191
           E     +  T +    + +   L++
Sbjct: 383 E---MAVPATKTFTSTIVVLKVLSL 404


>gi|325967790|ref|YP_004243982.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Vulcanisaeta moutnovskia 768-28]
 gi|323706993|gb|ADY00480.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Vulcanisaeta moutnovskia 768-28]
          Length = 611

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 34/155 (21%), Positives = 66/155 (42%), Gaps = 10/155 (6%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTPSFFV 96
           ++ S+L G    +F   V  +   + +++I G G S   G +G  L +T+    T +   
Sbjct: 270 AIGSTLAGINEKEFDNVVNLLLNSR-KILIVGAGTSYHAGLVGDYLLTTVLGLDTHAVIS 328

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
              +     +  +  +D +I +S SG + +    +   +     +IAI++   S +   +
Sbjct: 329 SEYKRY---VNAVNDNDTVIAISQSGETIDTLVAVRALKERGAKVIAISNVIDSAIPRES 385

Query: 157 DIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
           + VL     PE    G+A T +   QL I   L +
Sbjct: 386 NYVLYTRAGPE---IGVAATKTFTTQLVIMTILTL 417


>gi|295681015|ref|YP_003609589.1| signal transduction protein [Burkholderia sp. CCGE1002]
 gi|295440910|gb|ADG20078.1| putative signal transduction protein with CBS domains [Burkholderia
           sp. CCGE1002]
          Length = 230

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 52/130 (40%), Gaps = 27/130 (20%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------FRNFHKDLNT 282
               + DA  +  +     + V+    ++ GI+++GD+             R + + L++
Sbjct: 16  PEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLLHRVENGTGHGKRRWWLELLSS 75

Query: 283 LS--------------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
            +              V DVM +N   I ED  L     L+ + ++  + V+    + +G
Sbjct: 76  SAREQAARYVKEHGHVVGDVMCENVISIPEDMPLHQIADLMERRHLKRVPVL-KDGQLVG 134

Query: 329 IVHFLDLLRF 338
           IV   +L+R 
Sbjct: 135 IVSRSNLIRA 144



 Score = 53.7 bits (128), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 15/54 (27%), Positives = 25/54 (46%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   D+M  +      +  +  A +L   H+IS + V+    + IGIV   DLL
Sbjct: 1   MRALDIMTSSVITATPEMTIHDAAKLFVDHHISGMPVLGANGQVIGIVSQGDLL 54


>gi|238809625|dbj|BAH69415.1| hypothetical protein [Mycoplasma fermentans PG18]
          Length = 297

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 5/157 (3%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++++    +L    + A E I   K  + I G G S  I   L S L   G P       
Sbjct: 119 AIDNVYDEDLLKDINKAAEIINKSKN-IYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDF 177

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L  +T +D++IV S +  + E   ++  A++   P+I +T    S       I 
Sbjct: 178 HIFFPSLAHVTENDVVIVYSNNLQTMEAHFVIEQAKKQKAPIIVLT----SSQEEDKLIA 233

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L          L P++S I Q+ I D L  A+LE 
Sbjct: 234 VKLRYHKIQSSTMLVPSSSKIAQMLITDLLFEAVLEH 270


>gi|51471864|gb|AAU04402.1| unknown [Citrus limon]
          Length = 117

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 8/97 (8%)

Query: 249 KRFGCVAVVD--EGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK--NPKVILEDTL 301
              G + VV   E +   GIITE D  R      +   +  V D+M +         DT 
Sbjct: 1   HNVGALVVVKPGEQKSAAGIITERDYLRKIIVQGRSSKSTKVGDIMTEENQLITASPDTK 60

Query: 302 LTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  AMQL+    I  + V+DD    IG+V   D++R 
Sbjct: 61  VLRAMQLMIDKRIRHIPVIDDKGM-IGMVSIGDVVRA 96



 Score = 40.7 bits (94), Expect = 0.37,   Method: Composition-based stats.
 Identities = 13/78 (16%), Positives = 33/78 (42%), Gaps = 1/78 (1%)

Query: 199 FSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD 258
            +E D+          +      D+M   + +        ++ A+ ++ +KR   + V+D
Sbjct: 21  ITERDYLRKIIVQGRSSKSTKVGDIMTEENQLITASPDTKVLRAMQLMIDKRIRHIPVID 80

Query: 259 EGQKLKGIITEGDIFRNF 276
           +   + G+++ GD+ R  
Sbjct: 81  DKG-MIGMVSIGDVVRAV 97


>gi|15609763|ref|NP_217142.1| hypothetical protein Rv2626c [Mycobacterium tuberculosis H37Rv]
 gi|15842166|ref|NP_337203.1| CBS domain-containing protein [Mycobacterium tuberculosis CDC1551]
 gi|31793812|ref|NP_856305.1| hypothetical protein Mb2659c [Mycobacterium bovis AF2122/97]
 gi|121638515|ref|YP_978739.1| hypothetical protein BCG_2653c [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|148662466|ref|YP_001283989.1| hypothetical protein MRA_2654 [Mycobacterium tuberculosis H37Ra]
 gi|148823820|ref|YP_001288574.1| hypothetical protein TBFG_12645 [Mycobacterium tuberculosis F11]
 gi|167967280|ref|ZP_02549557.1| hypothetical protein MtubH3_04272 [Mycobacterium tuberculosis
           H37Ra]
 gi|215404584|ref|ZP_03416765.1| hypothetical protein Mtub0_13050 [Mycobacterium tuberculosis
           02_1987]
 gi|215412417|ref|ZP_03421167.1| hypothetical protein Mtub9_13787 [Mycobacterium tuberculosis
           94_M4241A]
 gi|215428030|ref|ZP_03425949.1| hypothetical protein MtubT9_17232 [Mycobacterium tuberculosis T92]
 gi|215431582|ref|ZP_03429501.1| hypothetical protein MtubE_13108 [Mycobacterium tuberculosis
           EAS054]
 gi|215446883|ref|ZP_03433635.1| hypothetical protein MtubT_13439 [Mycobacterium tuberculosis T85]
 gi|218754366|ref|ZP_03533162.1| hypothetical protein MtubG1_13469 [Mycobacterium tuberculosis GM
           1503]
 gi|219558630|ref|ZP_03537706.1| hypothetical protein MtubT1_15537 [Mycobacterium tuberculosis T17]
 gi|224991009|ref|YP_002645696.1| hypothetical protein JTY_2647 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253798291|ref|YP_003031292.1| hypothetical protein TBMG_01345 [Mycobacterium tuberculosis KZN
           1435]
 gi|254232740|ref|ZP_04926067.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|254365294|ref|ZP_04981339.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|254551678|ref|ZP_05142125.1| hypothetical protein Mtube_14679 [Mycobacterium tuberculosis
           '98-R604 INH-RIF-EM']
 gi|260187641|ref|ZP_05765115.1| hypothetical protein MtubCP_16641 [Mycobacterium tuberculosis
           CPHL_A]
 gi|260201754|ref|ZP_05769245.1| hypothetical protein MtubT4_17062 [Mycobacterium tuberculosis T46]
 gi|260205950|ref|ZP_05773441.1| hypothetical protein MtubK8_16800 [Mycobacterium tuberculosis K85]
 gi|289444167|ref|ZP_06433911.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289448278|ref|ZP_06438022.1| CBS domain-containing protein [Mycobacterium tuberculosis CPHL_A]
 gi|289553584|ref|ZP_06442794.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289570797|ref|ZP_06451024.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289575338|ref|ZP_06455565.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289746424|ref|ZP_06505802.1| CBS domain-containing protein [Mycobacterium tuberculosis 02_1987]
 gi|289751252|ref|ZP_06510630.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289754746|ref|ZP_06514124.1| CBS domain-containing protein [Mycobacterium tuberculosis EAS054]
 gi|289758757|ref|ZP_06518135.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|289762800|ref|ZP_06522178.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|294994263|ref|ZP_06799954.1| hypothetical protein Mtub2_07043 [Mycobacterium tuberculosis 210]
 gi|297635238|ref|ZP_06953018.1| hypothetical protein MtubK4_14000 [Mycobacterium tuberculosis KZN
           4207]
 gi|297732231|ref|ZP_06961349.1| hypothetical protein MtubKR_14134 [Mycobacterium tuberculosis KZN
           R506]
 gi|298526102|ref|ZP_07013511.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|306776904|ref|ZP_07415241.1| hypothetical protein TMAG_02435 [Mycobacterium tuberculosis
           SUMu001]
 gi|306780805|ref|ZP_07419142.1| hypothetical protein TMBG_02764 [Mycobacterium tuberculosis
           SUMu002]
 gi|306785431|ref|ZP_07423753.1| hypothetical protein TMCG_01874 [Mycobacterium tuberculosis
           SUMu003]
 gi|306790031|ref|ZP_07428353.1| hypothetical protein TMDG_00344 [Mycobacterium tuberculosis
           SUMu004]
 gi|306794112|ref|ZP_07432414.1| hypothetical protein TMEG_03306 [Mycobacterium tuberculosis
           SUMu005]
 gi|306798527|ref|ZP_07436829.1| hypothetical protein TMFG_03873 [Mycobacterium tuberculosis
           SUMu006]
 gi|306804389|ref|ZP_07441057.1| hypothetical protein TMHG_01823 [Mycobacterium tuberculosis
           SUMu008]
 gi|306807571|ref|ZP_07444239.1| hypothetical protein TMGG_02244 [Mycobacterium tuberculosis
           SUMu007]
 gi|306968678|ref|ZP_07481339.1| hypothetical protein TMIG_03957 [Mycobacterium tuberculosis
           SUMu009]
 gi|306973018|ref|ZP_07485679.1| hypothetical protein TMJG_01609 [Mycobacterium tuberculosis
           SUMu010]
 gi|307080728|ref|ZP_07489898.1| hypothetical protein TMKG_03058 [Mycobacterium tuberculosis
           SUMu011]
 gi|307085317|ref|ZP_07494430.1| hypothetical protein TMLG_02357 [Mycobacterium tuberculosis
           SUMu012]
 gi|313659566|ref|ZP_07816446.1| hypothetical protein MtubKV_14149 [Mycobacterium tuberculosis KZN
           V2475]
 gi|81668658|sp|O06186|HRP1_MYCTU RecName: Full=Hypoxic response protein 1; Short=HRP1
 gi|2104285|emb|CAB08616.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium tuberculosis H37Rv]
 gi|13882452|gb|AAK47017.1| CBS domain protein [Mycobacterium tuberculosis CDC1551]
 gi|31619406|emb|CAD94844.1| CONSERVED HYPOTHETICAL PROTEIN [Mycobacterium bovis AF2122/97]
 gi|121494163|emb|CAL72641.1| Conserved hypothetical protein [Mycobacterium bovis BCG str.
           Pasteur 1173P2]
 gi|124601799|gb|EAY60809.1| conserved hypothetical protein [Mycobacterium tuberculosis C]
 gi|134150807|gb|EBA42852.1| conserved hypothetical protein [Mycobacterium tuberculosis str.
           Haarlem]
 gi|148506618|gb|ABQ74427.1| conserved hypothetical protein [Mycobacterium tuberculosis H37Ra]
 gi|148722347|gb|ABR06972.1| conserved hypothetical protein [Mycobacterium tuberculosis F11]
 gi|224774122|dbj|BAH26928.1| hypothetical protein JTY_2647 [Mycobacterium bovis BCG str. Tokyo
           172]
 gi|253319794|gb|ACT24397.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           1435]
 gi|289417086|gb|EFD14326.1| conserved hypothetical protein [Mycobacterium tuberculosis T46]
 gi|289421236|gb|EFD18437.1| CBS domain-containing protein [Mycobacterium tuberculosis CPHL_A]
 gi|289438216|gb|EFD20709.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN 605]
 gi|289539769|gb|EFD44347.1| conserved hypothetical protein [Mycobacterium tuberculosis K85]
 gi|289544551|gb|EFD48199.1| conserved hypothetical protein [Mycobacterium tuberculosis T17]
 gi|289686952|gb|EFD54440.1| CBS domain-containing protein [Mycobacterium tuberculosis 02_1987]
 gi|289691839|gb|EFD59268.1| conserved hypothetical protein [Mycobacterium tuberculosis T92]
 gi|289695333|gb|EFD62762.1| CBS domain-containing protein [Mycobacterium tuberculosis EAS054]
 gi|289710306|gb|EFD74322.1| conserved hypothetical protein [Mycobacterium tuberculosis GM 1503]
 gi|289714321|gb|EFD78333.1| conserved hypothetical protein [Mycobacterium tuberculosis T85]
 gi|298495896|gb|EFI31190.1| conserved hypothetical protein [Mycobacterium tuberculosis
           94_M4241A]
 gi|308214712|gb|EFO74111.1| hypothetical protein TMAG_02435 [Mycobacterium tuberculosis
           SUMu001]
 gi|308326360|gb|EFP15211.1| hypothetical protein TMBG_02764 [Mycobacterium tuberculosis
           SUMu002]
 gi|308329904|gb|EFP18755.1| hypothetical protein TMCG_01874 [Mycobacterium tuberculosis
           SUMu003]
 gi|308333518|gb|EFP22369.1| hypothetical protein TMDG_00344 [Mycobacterium tuberculosis
           SUMu004]
 gi|308337545|gb|EFP26396.1| hypothetical protein TMEG_03306 [Mycobacterium tuberculosis
           SUMu005]
 gi|308341212|gb|EFP30063.1| hypothetical protein TMFG_03873 [Mycobacterium tuberculosis
           SUMu006]
 gi|308346014|gb|EFP34865.1| hypothetical protein TMGG_02244 [Mycobacterium tuberculosis
           SUMu007]
 gi|308349019|gb|EFP37870.1| hypothetical protein TMHG_01823 [Mycobacterium tuberculosis
           SUMu008]
 gi|308353747|gb|EFP42598.1| hypothetical protein TMIG_03957 [Mycobacterium tuberculosis
           SUMu009]
 gi|308357587|gb|EFP46438.1| hypothetical protein TMJG_01609 [Mycobacterium tuberculosis
           SUMu010]
 gi|308361529|gb|EFP50380.1| hypothetical protein TMKG_03058 [Mycobacterium tuberculosis
           SUMu011]
 gi|308365143|gb|EFP53994.1| hypothetical protein TMLG_02357 [Mycobacterium tuberculosis
           SUMu012]
 gi|323718778|gb|EGB27936.1| hypothetical protein TMMG_02638 [Mycobacterium tuberculosis
           CDC1551A]
 gi|326904238|gb|EGE51171.1| hypothetical protein TBPG_02136 [Mycobacterium tuberculosis W-148]
 gi|328458061|gb|AEB03484.1| conserved hypothetical protein [Mycobacterium tuberculosis KZN
           4207]
          Length = 143

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/115 (17%), Positives = 47/115 (40%), Gaps = 4/115 (3%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF---RNFHKDLNT 282
               +  V     L  A   + E   G + +  +  +L G++T+ DI         D NT
Sbjct: 8   MNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGLAAGLDPNT 67

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            +  ++   +   +  +  +   + ++ +H +  + V+ +  + +GIV   D+ R
Sbjct: 68  ATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIAR 121



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 28/58 (48%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            +  D+M      + E   LT A Q +R+H+I  L +  D  +  G++   D++  G+
Sbjct: 2   TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGDDDRLHGMLTDRDIVIKGL 59



 Score = 38.3 bits (88), Expect = 1.9,   Method: Composition-based stats.
 Identities = 20/83 (24%), Positives = 35/83 (42%), Gaps = 1/83 (1%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
            G   G     A+    + DSI  V     + + + ++ E +   V V+ E  +L GI+T
Sbjct: 57  KGLAAGLDPNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISEH-RLVGIVT 115

Query: 269 EGDIFRNFHKDLNTLSVEDVMIK 291
           E DI R+  +      V+ +   
Sbjct: 116 EADIARHLPEHAIVQFVKAICSP 138


>gi|331004479|ref|ZP_08327950.1| hypothetical protein HMPREF0491_02812 [Lachnospiraceae oral taxon
           107 str. F0167]
 gi|330411046|gb|EGG90467.1| hypothetical protein HMPREF0491_02812 [Lachnospiraceae oral taxon
           107 str. F0167]
          Length = 282

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/202 (19%), Positives = 76/202 (37%), Gaps = 7/202 (3%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAE-KRGLSSLESSLQGELSFQFHCAVEKIK 61
           F  +  + + +  +S +K S     ++    E    + ++   L  E  +     V+ I+
Sbjct: 74  FRITLARDMGKSQYSDIKVSNSTDEIKIFFREYAENMIAIGKRLDTETMWN---CVKLIR 130

Query: 62  AIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWS 121
              G   I  +G +  +   +   L   G  S F  A E     + +   +D++I +S S
Sbjct: 131 NC-GMAHIIAVGNTVPLSQYIGFRLGRLGVRSSFGLATEYYMNHINLAEPNDIVIAISKS 189

Query: 122 GSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIM 181
           G+S  +   +  A+   +  IAIT+  +S VA  AD +L      +          S   
Sbjct: 190 GASKPILMGMELAKEKGLKSIAITAYEESPVAKMADYILL--SRGKDISFNYYKDYSHTN 247

Query: 182 QLAIGDALAIALLESRNFSEND 203
            +A  D L   L    +  +  
Sbjct: 248 MMATIDVLLEFLTNEESIRKKQ 269


>gi|326792643|ref|YP_004310464.1| nucleotidyl transferase [Clostridium lentocellum DSM 5427]
 gi|326543407|gb|ADZ85266.1| Nucleotidyl transferase [Clostridium lentocellum DSM 5427]
          Length = 348

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     +I+ I  L E     V V  E ++L G IT+GDI R   ++ N    V  VM  
Sbjct: 8   IAPNASVIECIKRLDETAKKIVFVT-ENERLLGSITDGDIRRWILQNGNLEQPVMYVMND 66

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            P  +        A    ++ +I  + V+++ +  + I+
Sbjct: 67  KPIFVYMTER-KKARHYFKEKSIQAIPVINEKEHLVDIL 104


>gi|163782940|ref|ZP_02177935.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
 gi|159881620|gb|EDP75129.1| hypothetical protein HG1285_00155 [Hydrogenivirga sp. 128-5-R1-1]
          Length = 624

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/110 (26%), Positives = 54/110 (49%), Gaps = 7/110 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVE 286
           +PL++    +++A  ++ EK F CV V   G    GI+TE DI +      +D ++  + 
Sbjct: 164 VPLLRGEDSVLEAARLMREKNFSCVFV---GNGQTGIVTERDIIKRVVAEGRDPSSTRLS 220

Query: 287 DVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++M      + ED+ L  A+  +   NI  L V     + IG++   D++
Sbjct: 221 EIMSYPVVAVEEDSFLFEAIIEMANKNIRRLGV-SRDGRLIGVIEDKDII 269



 Score = 36.8 bits (84), Expect = 4.3,   Method: Composition-based stats.
 Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V+    L +AI  ++ K    + V     +L G+I + DI  +  K+L  L ++++
Sbjct: 230 VEEDSFLFEAIIEMANKNIRRLGVS-RDGRLIGVIEDKDIIAHESKNLVVL-IKEI 283


>gi|126652266|ref|ZP_01724445.1| YqzB [Bacillus sp. B14905]
 gi|169829161|ref|YP_001699319.1| YqzB [Lysinibacillus sphaericus C3-41]
 gi|126590998|gb|EAZ85110.1| YqzB [Bacillus sp. B14905]
 gi|168993649|gb|ACA41189.1| YqzB [Lysinibacillus sphaericus C3-41]
          Length = 210

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/124 (23%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKD 279
            V        +V     + DAI  +  +  G + VVD+ + L G+++  D+ R     +D
Sbjct: 79  KVKDFHSGPVVVPETMTVYDAICFMFSEDVGTLFVVDKNEFLTGVLSRKDLLRTSIGTQD 138

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLD 334
           LN + V  +M + P          L VA   L +  +  L VV+  +     IG +    
Sbjct: 139 LNKIPVHIIMTRMPNISYCERSDSLVVAANKLIEREVDSLPVVEPQEGGLTIIGRLTKTT 198

Query: 335 LLRF 338
           + R 
Sbjct: 199 ITRA 202



 Score = 46.0 bits (108), Expect = 0.008,   Method: Composition-based stats.
 Identities = 16/62 (25%), Positives = 28/62 (45%), Gaps = 1/62 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
               ++ L V+D     P V+ E   +  A+  +   ++  L VVD  +   G++   DL
Sbjct: 71  LMDSIHNLKVKDF-HSGPVVVPETMTVYDAICFMFSEDVGTLFVVDKNEFLTGVLSRKDL 129

Query: 336 LR 337
           LR
Sbjct: 130 LR 131


>gi|325662516|ref|ZP_08151119.1| hypothetical protein HMPREF0490_01859 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325471212|gb|EGC74437.1| hypothetical protein HMPREF0490_01859 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/138 (19%), Positives = 55/138 (39%), Gaps = 3/138 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
           QF   ++ +   K R+   GIG S     +  +           +           + + 
Sbjct: 121 QFQKILQMMNDAK-RIFFFGIGDSLLTAEEARNKFIRITNKVVCISDPHIQAMAAAVASE 179

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
           +DL +++S+SG++ +   +   A++    + +IT   KS +  H+D  L    E      
Sbjct: 180 EDLFVIISYSGATKDNIHVAKEAKQAGAKVASITHFKKSPLTAHSDAYLLCGSEEAPLDG 239

Query: 172 GLAPTTSAIMQLAIGDAL 189
           G    ++ + QL + D L
Sbjct: 240 G--SMSAKMGQLYLIDLL 255


>gi|329574579|gb|EGG56143.1| SIS domain protein [Enterococcus faecalis TX1467]
          Length = 194

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 11/184 (5%)

Query: 15  GHSLMKNSTVQCALRSIIAE-----KRGLSSLESSLQGELSFQ-FHCAVEKIKAIKGRVV 68
           G S +K +  + A ++   E        + +    L  E  ++    A++ I   +  V 
Sbjct: 5   GFSELKYAVKEEAKQTQTFENFYDTTVHVDAFLKKLNQETYYEMLRPAIQMIVQAR-HVA 63

Query: 69  ITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELK 128
            TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG ++E+ 
Sbjct: 64  FTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGETNEMI 121

Query: 129 AILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIMQLAIG 186
             +   +     +++IT+   S +A  AD  ++  +P E          TT+ I  +A+ 
Sbjct: 122 KQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIPVIALI 181

Query: 187 DALA 190
           + LA
Sbjct: 182 ELLA 185


>gi|315613601|ref|ZP_07888508.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis ATCC 49296]
 gi|315314292|gb|EFU62337.1| RpiR family phosphosugar-binding transcriptional regulator
           [Streptococcus sanguinis ATCC 49296]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 67/212 (31%), Gaps = 11/212 (5%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +    ++     HS   +   +  LRS    +     L          Q     + I  
Sbjct: 70  VFQYQHQASKPDTHSHKHSPLTKRVLRSYSIMREQTQDLIDE------EQLERVAQLIDD 123

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G G SG I  ++       G     +   +       ++  + L++  S SG
Sbjct: 124 AE-RVYFFGTGSSGLIAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENCLVLGFSLSG 182

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   L  A+      I  TS        + + VL       S    +   ++ +  
Sbjct: 183 TTQSVLDSLLDAKEMGAKTILFTSAPNKNSQAYTETVLVTSHSQSSY---IQRISAQLPM 239

Query: 183 LAIGDAL-AIALLESRNFSENDFYVLHPGGKL 213
           L + D + A  L  +R   E  F       KL
Sbjct: 240 LILIDLIYAYFLEINRESKEKIFNSYWENKKL 271


>gi|294848998|ref|ZP_06789743.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9754]
 gi|294824377|gb|EFG40801.1| glycine betaine/carnitine/choline transport ATP-binding protein
           opuCA [Staphylococcus aureus A9754]
          Length = 410

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/125 (21%), Positives = 53/125 (42%), Gaps = 8/125 (6%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
                 V         ++    L DA+ I+ +KR   + VVD    L G +   DI +  
Sbjct: 247 RPNDKTVEGVMIKPITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIEDINQGI 306

Query: 277 HKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
                  S+ D M ++   +  D+ L  +++ + + N+  + VVDD Q+ +G++      
Sbjct: 307 RG---HKSLRDTMQQHIYTVQIDSKLQDSVRTILKRNVRNVPVVDDQQRLVGLIT----- 358

Query: 337 RFGII 341
           R  ++
Sbjct: 359 RANVV 363



 Score = 59.9 bits (144), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
           R      N  +VE VMIK P  I  +  L  A+ ++RQ  +  + VVD     +G +   
Sbjct: 242 RLIQDRPNDKTVEGVMIK-PITIQAEATLNDAVHIMRQKRVDAIFVVDSNNHLLGFLDIE 300

Query: 334 DL 335
           D+
Sbjct: 301 DI 302


>gi|284996868|ref|YP_003418635.1| glutamine amidotransferase, class-II [Sulfolobus islandicus
           L.D.8.5]
 gi|284444763|gb|ADB86265.1| glutamine amidotransferase, class-II [Sulfolobus islandicus
           L.D.8.5]
          Length = 584

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  ++      I      V + G G S H G       +  G     V AAE  +  L
Sbjct: 263 NSLMEKYLSLASMILYGAKNVYVIGNGTSLHAGLISTYYFSEIGLNVNVVSAAEFPYYAL 322

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             +T   +II +S SG + ++   +  A++    ++ IT+   S +A  +++ L +   P
Sbjct: 323 ENVTTGSVIIAISQSGETSDVIRSVKMAKQRGAVILGITNSVGSRLALESNVYLPITAGP 382

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI 191
           E     +  T +    + +   L++
Sbjct: 383 E---MAVPATKTFTSTIVVLKVLSL 404


>gi|171913458|ref|ZP_02928928.1| Chloride channel core [Verrucomicrobium spinosum DSM 4136]
          Length = 598

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/112 (25%), Positives = 43/112 (38%), Gaps = 9/112 (8%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEK-----RFGCVAVVDEGQKLKGIITEGDIFRNF--HK 278
               +P V     L +    ++             V+D  Q+LKGI+T GDI R      
Sbjct: 463 MDTQVPTVPSTMKLQELARRIAAGDPILAGHQATLVLDPEQRLKGIVTRGDIIRALPDAA 522

Query: 279 DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC--QKAIG 328
           +  TL+VE+       V   D  L  A+  +   NI  + VV+       IG
Sbjct: 523 ENETLTVEEAGSSPLTVTYPDEPLADALNRMLAQNIGRMPVVERERPDHLIG 574


>gi|168004844|ref|XP_001755121.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162693714|gb|EDQ80065.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 653

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/137 (19%), Positives = 49/137 (35%), Gaps = 31/137 (22%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK------- 278
                  V     + +++  +      C  VVDE   L+GI++  D+ R   +       
Sbjct: 508 MSKDFVRVNAMSTVKESLGAMLAGGQRCALVVDENDLLEGIMSSSDLQREVLRATEESVF 567

Query: 279 -------DLNTLSVEDVMI---------KNPKVILEDTLLTVAMQLLRQHNISVLMVV-- 320
                  +++T+ V  +            N  V   DT L  A +L++   +  L VV  
Sbjct: 568 SDVPIIVEVDTMLVAAICTSSIENVADGHNIVVCYPDTTLRAAEELMQPRGLRQLPVVTR 627

Query: 321 ------DDCQKAIGIVH 331
                 D   K +G++H
Sbjct: 628 VGRQWQDRGHKVVGLLH 644


>gi|156973356|ref|YP_001444263.1| hypothetical protein VIBHAR_01043 [Vibrio harveyi ATCC BAA-1116]
 gi|156524950|gb|ABU70036.1| hypothetical protein VIBHAR_01043 [Vibrio harveyi ATCC BAA-1116]
          Length = 154

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/122 (18%), Positives = 44/122 (36%), Gaps = 11/122 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
               +   +     L DA +++         VVD  + LKG++T+ DI       L+   
Sbjct: 13  MMNRNPHTLLREHTLRDAKSMMEALDIRHTPVVDANKHLKGLVTQRDILAAQESCLHPDE 72

Query: 282 -------TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                     +  +M  N         L  +   +++H +  L VV+     +GI+   D
Sbjct: 73  AEQSFTLDTPLYQMMHTNIMTAEPRAGLKESAIYMQKHKVGCLPVVNK-GHLVGIITDTD 131

Query: 335 LL 336
            +
Sbjct: 132 FV 133



 Score = 55.7 bits (133), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 17/55 (30%), Positives = 27/55 (49%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            VED+M +NP  +L +  L  A  ++   +I    VVD  +   G+V   D+L  
Sbjct: 9   KVEDMMNRNPHTLLREHTLRDAKSMMEALDIRHTPVVDANKHLKGLVTQRDILAA 63



 Score = 37.6 bits (86), Expect = 3.1,   Method: Composition-based stats.
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 1/79 (1%)

Query: 193 LLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFG 252
           L+  R+        LHP     +  +          +I   +    L ++   + + + G
Sbjct: 54  LVTQRDILAAQESCLHPDEAEQSFTLDTPLYQMMHTNIMTAEPRAGLKESAIYMQKHKVG 113

Query: 253 CVAVVDEGQKLKGIITEGD 271
           C+ VV++   L GIIT+ D
Sbjct: 114 CLPVVNK-GHLVGIITDTD 131


>gi|111223760|ref|YP_714554.1| transcriptional regulator [Frankia alni ACN14a]
 gi|111151292|emb|CAJ63006.1| putative RpiR familytranscriptional regulator with
           phosphosugar-binding domain [Frankia alni ACN14a]
          Length = 303

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/130 (24%), Positives = 53/130 (40%), Gaps = 2/130 (1%)

Query: 34  EKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           E      L  +L          AV+ + +  GR++I G G SG +    A    S G P+
Sbjct: 115 EAAA-KVLADALGPLDRASLTPAVDLLDSA-GRLLIVGNGGSGPVAQDAALRFLSIGRPA 172

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
                +        ++   D+ +V++ SG+++        AR    P+I ITS     +A
Sbjct: 173 EAPGDSIIQEIAARLLAPTDVCLVITSSGANEPTLRAAEAARSAGAPVIGITSYTSGPLA 232

Query: 154 CHADIVLTLP 163
             ADI L + 
Sbjct: 233 EIADITLVIG 242


>gi|228925028|ref|ZP_04088157.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
 gi|228834605|gb|EEM80115.1| Glucosamine--fructose-6-phosphate aminotransferase [Bacillus
           thuringiensis serovar huazhongensis BGSC 4BD1]
          Length = 375

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 21/142 (14%)

Query: 29  RSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG--------- 79
             I  + R L++L +      + Q    V +IK  + RV ITG G S H+          
Sbjct: 23  EEICEQVRYLNNLNNCFID--NEQIIEIVNQIKYCR-RVFITGCGTSYHVALTSEYISRM 79

Query: 80  -SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFS 138
             K  + + S   P+F +     +      I+ +D++I +S SG +  +   L   R   
Sbjct: 80  IFKDVNLIRS--VPAFELIHHPWN------ISSEDVVIAVSHSGETTMVLKALENVRAVK 131

Query: 139 IPLIAITSENKSVVACHADIVL 160
              I IT   +S  A  AD V+
Sbjct: 132 AKTILITGFPESSAAQKADHVI 153



 Score = 36.0 bits (82), Expect = 7.8,   Method: Composition-based stats.
 Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 4/106 (3%)

Query: 16  HSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVI-TGIGK 74
           + L K   V+    +I  E   +S L       +  +      +++     +   TG+G+
Sbjct: 181 YELSKYYGVKNISSNIKQEFEKISQLVEETILSIDKKVSILSRELQPANNWIFAGTGVGE 240

Query: 75  SGHIGSKLASTLAST-GTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           S  +  + A     T  +P+  +   +  HG L M   + ++ ++S
Sbjct: 241 S--LAREAALKFVETSYSPAIGIDIEQVLHGYLPMCNSNTVLTIIS 284


>gi|50423715|ref|XP_460442.1| DEHA2F01804p [Debaryomyces hansenii CBS767]
 gi|49656111|emb|CAG88749.1| DEHA2F01804p [Debaryomyces hansenii]
          Length = 521

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 43/109 (39%), Gaps = 6/109 (5%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           ++     + D   + +E  F    V + G    KL GI+T  D+  +   D N   V ++
Sbjct: 125 VISPNETVGDVRNMKAELGFTSFPVTENGKIGGKLVGIVTSRDVQFH---DNNDSKVSEI 181

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           M        +   L+   +LLR      L +VD     + ++   DL +
Sbjct: 182 MTTELITGEKGIDLSEGNELLRSSKKGKLPIVDASGNLVSLISLTDLQK 230


>gi|52081952|ref|YP_080743.1| ABC transporter [Bacillus licheniformis ATCC 14580]
 gi|52787336|ref|YP_093165.1| opuCA [Bacillus licheniformis ATCC 14580]
 gi|319647815|ref|ZP_08002033.1| OpuCA protein [Bacillus sp. BT1B_CT2]
 gi|52005163|gb|AAU25105.1| ABC transporter [Bacillus licheniformis ATCC 14580]
 gi|52349838|gb|AAU42472.1| OpuCA [Bacillus licheniformis ATCC 14580]
 gi|317390156|gb|EFV70965.1| OpuCA protein [Bacillus sp. BT1B_CT2]
          Length = 379

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/111 (22%), Positives = 53/111 (47%), Gaps = 3/111 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
              +   +     L +AI ++ E+R   + VVDE   LKG I   D+         +++V
Sbjct: 255 MNPNPVTITSEKNLTEAIQVMRERRVDSLLVVDEHNVLKGYI---DVEIIDQNRKKSVTV 311

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +V+ +N   + + TL+   ++ + +     + V+D+  + +GIV   +L+
Sbjct: 312 GEVVNENVYSVQKGTLIRDTVRKILKRGFKYVPVLDEEGRLVGIVTRANLV 362



 Score = 59.1 bits (142), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 18/57 (31%), Positives = 28/57 (49%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
           R      +   VE VM  NP  I  +  LT A+Q++R+  +  L+VVD+     G +
Sbjct: 240 RLLQSRPDIEHVEQVMNPNPVTITSEKNLTEAIQVMRERRVDSLLVVDEHNVLKGYI 296


>gi|323473906|gb|ADX84512.1| glutamine amidotransferase class-II [Sulfolobus islandicus REY15A]
 gi|323477061|gb|ADX82299.1| glutamine amidotransferase class-II [Sulfolobus islandicus HVE10/4]
          Length = 584

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/145 (20%), Positives = 58/145 (40%), Gaps = 3/145 (2%)

Query: 47  GELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDL 106
             L  ++      I      V + G G S H G       +  G     V AAE  +  L
Sbjct: 263 NSLMEKYLSLASMILYGAKNVYVIGNGTSLHAGLISTYYFSEIGLNVNVVSAAEFPYYAL 322

Query: 107 GMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEP 166
             +T   +II +S SG + ++   +  A++    ++ IT+   S +A  +++ L +   P
Sbjct: 323 ENVTTGSVIIAISQSGETSDVIRSVKMAKQRGAVILGITNSVGSRLALESNVYLPITAGP 382

Query: 167 ESCPHGLAPTTSAIMQLAIGDALAI 191
           E     +  T +    + +   L++
Sbjct: 383 E---MAVPATKTFTSTIVVLKVLSL 404


>gi|308189641|ref|YP_003922572.1| transcriptional regulator [Mycoplasma fermentans JER]
 gi|307624383|gb|ADN68688.1| putative transcriptional regulator [Mycoplasma fermentans JER]
          Length = 288

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/157 (25%), Positives = 64/157 (40%), Gaps = 5/157 (3%)

Query: 40  SLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAA 99
           ++++    +L    + A E I   K  + I G G S  I   L S L   G P       
Sbjct: 110 AIDNVYDEDLIKDINKAAEIINKSKN-IYIHGCGSSQRISMNLVSNLLKIGKPVIAHSDF 168

Query: 100 EASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIV 159
                 L  +T +D++IV S +  + E   ++  A++   P+I +T    S       I 
Sbjct: 169 HIFFPSLAHVTENDVVIVYSNNLQTMEAHFVIEQAKKQKAPIIVLT----SSQEEDKLIA 224

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + L          L P++S I Q+ I D L  A+LE 
Sbjct: 225 VKLRYHKIQSSTMLVPSSSKIAQMLITDLLFEAVLEH 261


>gi|283480227|emb|CAY76143.1| putative transcriptional regulator [Erwinia pyrifoliae DSM 12163]
          Length = 297

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 137 AQALQQLAMQANPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 192

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 193 LIDGLGGMFTEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 252

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 253 AFSDVCFVV 261


>gi|259910127|ref|YP_002650483.1| RpiR family transcriptional regulator [Erwinia pyrifoliae Ep1/96]
 gi|224965749|emb|CAX57281.1| RpiR family transcriptional regulator [Erwinia pyrifoliae Ep1/96]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 49/129 (37%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQANPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFTEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|42519713|ref|NP_965643.1| hypothetical protein LJ0612 [Lactobacillus johnsonii NCC 533]
 gi|41584002|gb|AAS09609.1| hypothetical protein LJ_0612 [Lactobacillus johnsonii NCC 533]
 gi|329667963|gb|AEB93911.1| putative transcriptional regulator [Lactobacillus johnsonii DPC
           6026]
          Length = 272

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/180 (21%), Positives = 71/180 (39%), Gaps = 11/180 (6%)

Query: 11  VTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVIT 70
            T KGH   + S+   + + +I+    +   E  +   +      AV  +   + R+ I 
Sbjct: 77  TTSKGHDEAQTSSELSS-KVLIS---SIEKTEELINPSV---LKQAVSLLAKAR-RIHIF 128

Query: 71  GIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
           G+G SG        T    G  +              ++++DDL++ LS SG + +    
Sbjct: 129 GLGHSGESARDYERTWLRIGLIANAESDPHIQVQVATLLSKDDLVVGLSLSGHTKDTYDS 188

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A+ +   +IAIT++  S +A   D+ L            +      + QL + D LA
Sbjct: 189 LKVAKEYGAKIIAITNDLTSPIAQLGDVSLQTSVSEF---MNIGTVAGQVSQLYLCDVLA 245


>gi|70726221|ref|YP_253135.1| hypothetical protein SH1220 [Staphylococcus haemolyticus JCSC1435]
 gi|68446945|dbj|BAE04529.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
          Length = 434

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/129 (17%), Positives = 53/129 (41%), Gaps = 5/129 (3%)

Query: 210 GGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITE 269
              +    +   D++   + + ++     + D  +           VVD+  +L GI+T 
Sbjct: 180 NQMIRKEILIVEDIVKPINDMTVIFDEMGIEDYKSRAKVTGHSRFPVVDKDWRLVGIVTS 239

Query: 270 GDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
            ++ +    D    ++  VM K P  +  +T +     ++    I +L V    ++AIG+
Sbjct: 240 KEVIQMNSDD----TIAKVMTKRPINVELNTTVASCAHIMIWEGIEILPVT-QNKRAIGV 294

Query: 330 VHFLDLLRF 338
           +   D+L+ 
Sbjct: 295 ITRDDVLKA 303


>gi|115351392|ref|YP_773231.1| XRE family transcriptional regulator [Burkholderia ambifaria AMMD]
 gi|170703575|ref|ZP_02894324.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
 gi|171322386|ref|ZP_02911205.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
 gi|172060431|ref|YP_001808083.1| CBS domain-containing protein [Burkholderia ambifaria MC40-6]
 gi|115281380|gb|ABI86897.1| putative transcriptional regulator, XRE family [Burkholderia
           ambifaria AMMD]
 gi|170131518|gb|EDT00097.1| CBS domain containing protein [Burkholderia ambifaria IOP40-10]
 gi|171092288|gb|EDT37662.1| CBS domain containing protein [Burkholderia ambifaria MEX-5]
 gi|171992948|gb|ACB63867.1| CBS domain containing protein [Burkholderia ambifaria MC40-6]
          Length = 151

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 6/108 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---LNTLSVEDVM 289
           V    PL +A+  ++E   G + VV E   L G++T  +I    H +   +  + V  VM
Sbjct: 17  VTPDKPLREAVDTMAEHDIGSL-VVMEYGDLVGMLTFREIILRLHVNGGAIGDVQVRKVM 75

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
              P     +T +    +++ + +   + V+D  +  +G++ F D+ +
Sbjct: 76  -DEPLTCTPETDVNEVRRMMLERHARYMPVLDK-KVLMGVISFYDVAK 121



 Score = 39.9 bits (92), Expect = 0.54,   Method: Composition-based stats.
 Identities = 9/42 (21%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 295 VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
            +  D  L  A+  + +H+I  L+V+ +    +G++ F +++
Sbjct: 16  TVTPDKPLREAVDTMAEHDIGSLVVM-EYGDLVGMLTFREII 56


>gi|325970371|ref|YP_004246562.1| RpiR family transcriptional regulator [Spirochaeta sp. Buddy]
 gi|324025609|gb|ADY12368.1| transcriptional regulator, RpiR family [Spirochaeta sp. Buddy]
          Length = 280

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/164 (17%), Positives = 59/164 (35%), Gaps = 3/164 (1%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
                +LE +           A ++       + + G+G S  +       L  TG    
Sbjct: 101 ANARKNLEETYAKLDRQVLKEAAKRFAGSHA-LYLMGLGGSNILAQDAYHKLIRTGLNCQ 159

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
           +              T  D+ +++S +G+  +  A+    R     LI +TS  +S ++ 
Sbjct: 160 YASEFHMQLMLASQATEGDVALLVSHTGAGHDTLALAEELRNNGCFLIVLTSNTRSPLSK 219

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
             ++VL++     S        ++ I  L + D L + +LE   
Sbjct: 220 LGNLVLSVSNPTSSVV--AESFSARITSLVLIDVLYVEVLEQIG 261


>gi|319401726|gb|EFV89934.1| magnesium transporter [Staphylococcus epidermidis FRI909]
          Length = 461

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAV-----VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           K   P+ +A+  + E+      +     V+E ++L G+++  D+        N   +EDV
Sbjct: 157 KSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLIVA----ENDAYIEDV 212

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +               QL+R ++   + VVD     +GI+   D+L
Sbjct: 213 MSERVISANVGDDQEDIAQLMRDYDFIAVPVVDYQNHLLGIITIDDIL 260



 Score = 36.4 bits (83), Expect = 6.7,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLL 336
           +   +M      +   T +  A+  +++       I V+  V++ ++ +G++   DL+
Sbjct: 144 TAGGIMTTEFISLKSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLI 201


>gi|313672445|ref|YP_004050556.1| cbs domain and cyclic nucleotide-regulated nucleotidyltransferase
           [Calditerrivibrio nitroreducens DSM 19672]
 gi|312939201|gb|ADR18393.1| putative CBS domain and cyclic nucleotide-regulated
           nucleotidyltransferase [Calditerrivibrio nitroreducens
           DSM 19672]
          Length = 637

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/121 (19%), Positives = 49/121 (40%), Gaps = 4/121 (3%)

Query: 212 KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
            +   F  +     +  + P V I   + +A   +S K +    V+    +  GIIT+ D
Sbjct: 162 SIERFFFTSLVSYVTNVNYPYVDINATVAEAGKQMSLKNYSACVVIGY-GRPMGIITDKD 220

Query: 272 IFRNF-HKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
           + +    K L+ +  V D+M      + +D     A+  +    +  L+V ++     G+
Sbjct: 221 LRKKVVAKSLDYSTPVSDIMSAPVYSVEDDVTCFEAIVKMISLGVHHLVVTNND-AVFGV 279

Query: 330 V 330
           +
Sbjct: 280 I 280


>gi|238794248|ref|ZP_04637862.1| Transcriptional regulator, RpiR family [Yersinia intermedia ATCC
           29909]
 gi|238726430|gb|EEQ17970.1| Transcriptional regulator, RpiR family [Yersinia intermedia ATCC
           29909]
          Length = 260

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/133 (21%), Positives = 61/133 (45%), Gaps = 5/133 (3%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKA---IKGRVVITGIGKSGHIGSKLASTLASTGTPS 93
           G+S + S  +   + +F   ++ + A      R++  GIG SG +G   A   ++ G  S
Sbjct: 95  GISEIISYFKSINNSEFDDLLDTVAAQIAATPRIIFVGIGTSGALGKYSARFFSNIGKFS 154

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            ++            + +D + I+ S SG ++E+  I       +  +I++T+ + S +A
Sbjct: 155 TYIDDPYYPINS--DMYQDAIAIMFSVSGETEEIIRIANQFSLHNCKIISLTNSDNSTLA 212

Query: 154 CHADIVLTLPKEP 166
             AD+ ++    P
Sbjct: 213 KMADLNISYHMPP 225


>gi|237735663|ref|ZP_04566144.1| transcriptional regulator [Mollicutes bacterium D7]
 gi|229381408|gb|EEO31499.1| transcriptional regulator [Coprobacillus sp. D7]
          Length = 281

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 40/183 (21%), Positives = 78/183 (42%), Gaps = 12/183 (6%)

Query: 14  KGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI--KAIKGRVVITG 71
           K   + +NST Q  ++ I          +S +Q  L    +  ++ I   +   R+ I G
Sbjct: 86  KDEPVDENSTYQDIVKVIPTIYD-----KSIVQTRLDLDQNKMIQVINRLSQAKRISIYG 140

Query: 72  IGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMI-TRDDLIIVLSWSGSSDELKAI 130
            G S  I S+ A  + + G      H+    H  L    +R  + I++S++G++ E+  I
Sbjct: 141 TGISYTIASQAAFKIMTLGKEC-DAHSGINEHFILSQKNSRQCVAILISFTGNNSEMIKI 199

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
             Y ++  I +IAI  +    +  + DI L +    +     +   TS    + + D + 
Sbjct: 200 AKYLKKAGIYVIAIGGKKGE-LQNYCDIYLNVYSSQDILSLEVI--TSFTATMYVLDVIF 256

Query: 191 IAL 193
           ++L
Sbjct: 257 VSL 259


>gi|221199030|ref|ZP_03572075.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
 gi|221181481|gb|EEE13883.1| transcriptional regulator, RpiR family [Burkholderia multivorans
           CGD2M]
          Length = 311

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/167 (23%), Positives = 71/167 (42%), Gaps = 6/167 (3%)

Query: 30  SIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAST 89
           SI      LS+L  +++         AV  I+  + +V   G G S  + +     L + 
Sbjct: 132 SIRTGVDALSALSGAIE---IAALDKAVASIQQAR-QVFAFGAGPSATVAADTVFRLRAV 187

Query: 90  GTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENK 149
           G  +  +    ++     ++   D++I +S +G +    A+   A      L+A+T++  
Sbjct: 188 GVTTVGIPDYLSAMIAARLLGPGDVVIAVSSTGRTSSTLAVADAASSAGATLVAVTNQYG 247

Query: 150 SVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           + +A  ADI L +   P   P  +A   S + QL + DAL  AL   
Sbjct: 248 TPLANLADIALVVGGAPL--PAQMAAAGSRLAQLVVIDALVAALALR 292


>gi|157148439|ref|YP_001455758.1| hypothetical protein CKO_04264 [Citrobacter koseri ATCC BAA-895]
 gi|157085644|gb|ABV15322.1| hypothetical protein CKO_04264 [Citrobacter koseri ATCC BAA-895]
          Length = 242

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 49/123 (39%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I + + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDKLLDQAVDIILSSE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    ++ L IVLS SG + E+          +  +++ITS   S +A  AD  L+   
Sbjct: 153 DM---AKNALAIVLSVSGETAEILRFASQFSLHNCKVLSITSHEHSALAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|323142085|ref|ZP_08076933.1| inosine 5-monophosphate dehydrogenase [Phascolarctobacterium sp.
           YIT 12067]
 gi|322413472|gb|EFY04343.1| inosine 5-monophosphate dehydrogenase [Phascolarctobacterium sp.
           YIT 12067]
          Length = 503

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/160 (23%), Positives = 63/160 (39%), Gaps = 12/160 (7%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  SAIMQ   G+ LA+AL +     F      V      +  +    +  + S  + 
Sbjct: 51  NIPMVSAIMQAVSGEKLAVALSKEGGVSFIYGSQSVEDEAAMVARVKGYRAGFVSSDSN- 109

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDE---GQKLKGIITEGDIFRNFHKDLNTLSVED 287
             ++    L D + +        VAV  +     KL+GI+T  D   +  +      V D
Sbjct: 110 --IRPDSTLADILALKERTGHSTVAVTSDGTANGKLEGIVTSRDYRPS--RMSMDAKVRD 165

Query: 288 VMIKNPKVILE--DTLLTVAMQLLRQHNISVLMVVDDCQK 325
            M    K++    DT L  A  ++ +  ++ L +VDD  +
Sbjct: 166 FMTPIDKMVYAPKDTTLQQANDIIWEKKLNTLPIVDDDGR 205


>gi|158339071|ref|YP_001520248.1| two-component hybrid sensor and regulator histidine kinase
           [Acaryochloris marina MBIC11017]
 gi|158309312|gb|ABW30929.1| two-component hybrid sensor and regulator histidine kinase
           [Acaryochloris marina MBIC11017]
          Length = 1764

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/126 (22%), Positives = 50/126 (39%), Gaps = 20/126 (15%)

Query: 233 VKIGCPLIDAITILSEKR----------------FGCVAVVDEGQKLKGIITEGDIFRNF 276
           V +  P++  +  +S+                    C  V     +L G+ TE D+ +  
Sbjct: 24  VTVDTPVMSVLKQMSQLYGAACAFPVDPKESLLQASCAIVTHSSGRLAGVFTERDLVQLM 83

Query: 277 --HKDLNTLSVEDVMIKNPKVILEDT--LLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
               DL   ++ DV+   P  I  +    ++V + L+R+  +  L VV   QK +GIV  
Sbjct: 84  VEGHDLAHANIGDVLRDLPVTISPEQCRDISVPLFLMRRAKVQHLPVVTPQQKVLGIVTL 143

Query: 333 LDLLRF 338
             L + 
Sbjct: 144 GTLCQA 149



 Score = 63.4 bits (153), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 48/126 (38%), Gaps = 8/126 (6%)

Query: 216 LFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDI 272
                  VM +            +++    +      C  V  + Q+   L GIITE DI
Sbjct: 157 QLWSVPAVMSTEVVCA--APSMSILEVACQMHAHHTSCAVVTCQKQQMTQLIGIITERDI 214

Query: 273 FR--NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
            +       + T  VE VM      +     L    Q +  H+I  ++VVD   + +GIV
Sbjct: 215 LQLQTLGIPMTTTFVEQVMSSPLFSVNPKDSLWSVYQQMHHHHIRRMVVVD-SNQILGIV 273

Query: 331 HFLDLL 336
           +  DLL
Sbjct: 274 NQDDLL 279



 Score = 56.1 bits (134), Expect = 8e-06,   Method: Composition-based stats.
 Identities = 22/101 (21%), Positives = 39/101 (38%), Gaps = 5/101 (4%)

Query: 243 ITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--LNTLSVEDVMIKNPKVILEDT 300
           + ++   +   + VV   QK+ GI+T G + +       L   SV  VM           
Sbjct: 117 LFLMRRAKVQHLPVVTPQQKVLGIVTLGTLCQAIEATNFLQLWSVPAVMSTEVVCAAPSM 176

Query: 301 LLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLDLLRF 338
            +      +  H+ S  +V    Q   + IGI+   D+L+ 
Sbjct: 177 SILEVACQMHAHHTSCAVVTCQKQQMTQLIGIITERDILQL 217


>gi|47220485|emb|CAG03265.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 539

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/178 (19%), Positives = 61/178 (34%), Gaps = 23/178 (12%)

Query: 173 LAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGKLGTLFVCASDVMH 225
             P  S+ M       +AIA+           N +   F                     
Sbjct: 63  KTPFVSSPMDTVTEANMAIAMALTGGIGFIHHNCTPE-FQANE--------VRKVKRYEQ 113

Query: 226 SGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLN 281
              + P+V      + D     +   F  + + D G    KL GII+  DI     +D +
Sbjct: 114 GFITDPVVMSPNERVRDVFQAKARHGFCGIPITDNGKMGGKLVGIISSRDIDFLKEED-H 172

Query: 282 TLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            L + +VM K  +  V      L  A ++L++     L +V++    + I+   DL +
Sbjct: 173 DLPLNEVMTKREDLVVAPAGVTLKEANEILQRSKKGKLPIVNEQGSLVSIIARTDLKK 230


>gi|148264296|ref|YP_001231002.1| CBS domain-containing protein [Geobacter uraniireducens Rf4]
 gi|146397796|gb|ABQ26429.1| CBS domain containing protein [Geobacter uraniireducens Rf4]
          Length = 875

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/124 (16%), Positives = 50/124 (40%), Gaps = 2/124 (1%)

Query: 215 TLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
            +             + ++     + +A  +L+      + V+D G++L G+I+   + +
Sbjct: 304 RVNPRRVASDIMSSPVKIISADATIEEARELLTRYNVNAMPVMD-GERLVGVISRRIVEK 362

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
           + + +L  + V D M          T ++     +   N  ++ V+      +G+V   D
Sbjct: 363 SLYHNLGHVPVSDYMHSEFMSAEPSTPISDIQDYIVGRNRRLVPVL-ADGNLVGVVTRTD 421

Query: 335 LLRF 338
           +LR+
Sbjct: 422 ILRY 425


>gi|328873304|gb|EGG21671.1| hypothetical protein DFA_01557 [Dictyostelium fasciculatum]
          Length = 2184

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/172 (18%), Positives = 64/172 (37%), Gaps = 15/172 (8%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGD---- 228
             P  S+ M       +AI +            ++H    +         V    +    
Sbjct: 82  NIPLVSSPMDTVTEHTMAINMALLGG-----MGIIHYNNTIEEQVTEVKRVKRFKNGFIT 136

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQ---KLKGIITEGDIFRNFHKDLNTLSV 285
              ++     L D   I ++  F  + + +EG+   KL GI+T  D   +F KD  + ++
Sbjct: 137 DPIVLSPKHKLSDVDNIKAKFGFSGIPITEEGRIGSKLVGIVTSRD--TDFIKD-RSTAL 193

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
            D+M  +      +  L  A  +++      L +V+D  + + +    DLL+
Sbjct: 194 ADIMTTDLVTAPANCTLEEANTIMKTCKKGKLPIVNDRGELVALASRDDLLK 245


>gi|332703226|ref|ZP_08423314.1| CBS domain containing protein [Desulfovibrio africanus str. Walvis
           Bay]
 gi|332553375|gb|EGJ50419.1| CBS domain containing protein [Desulfovibrio africanus str. Walvis
           Bay]
          Length = 217

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 53/122 (43%), Gaps = 16/122 (13%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD---------- 279
              V     + +A T+L ++    + VVD G+KL G + + DI                 
Sbjct: 11  FQTVTTKTSVAEAQTLLEKQHLWMLLVVD-GEKLVGYVRDEDISAALPSMMTTLDKFEAL 69

Query: 280 --LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH---FLD 334
             L  L++  +M K+   +  +  +  A  ++ + N++ L VVD   K +G ++    LD
Sbjct: 70  YLLRKLTIGMIMRKDIVTVPPEMEIEAAANIMHEKNLAGLAVVDRSGKLVGYINRTVMLD 129

Query: 335 LL 336
           +L
Sbjct: 130 VL 131


>gi|307353476|ref|YP_003894527.1| 6-phospho 3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
 gi|307156709|gb|ADN36089.1| 6-phospho 3-hexuloisomerase [Methanoplanus petrolearius DSM 11571]
          Length = 200

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/188 (17%), Positives = 67/188 (35%), Gaps = 26/188 (13%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           +  +  S+  +    F   +++I     R+ + G G+SG +    A  L   G  S+ + 
Sbjct: 18  IEEMADSISDQEVDLF---IDEILKA-NRIYVMGAGRSGLVAKAFAMRLMHLGLKSYVIG 73

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                      + + D+I+  S SG +  +  +   A+     +  +TS++ S +   +D
Sbjct: 74  ETITP-----AMEKGDMIVAFSGSGETKTIAELCETAKTLGGRICLVTSKSDSRIGRISD 128

Query: 158 IVLTLPKEPESCPH---------------GLAPTTSAIMQLAI--GDALAIALLESRNFS 200
             + L    +                     AP  +     A+   D++  A++   N  
Sbjct: 129 CTVVLESHRDYIRDESSEFEIKQMKGELKSFAPLGTLFETGAMIFADSIISAIMIILNCE 188

Query: 201 ENDFYVLH 208
           E D    H
Sbjct: 189 EKDLKGRH 196


>gi|302868661|ref|YP_003837298.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315504867|ref|YP_004083754.1| transcriptional regulator, rpir family [Micromonospora sp. L5]
 gi|302571520|gb|ADL47722.1| sugar isomerase (SIS) [Micromonospora aurantiaca ATCC 27029]
 gi|315411486|gb|ADU09603.1| transcriptional regulator, RpiR family [Micromonospora sp. L5]
          Length = 315

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/148 (20%), Positives = 58/148 (39%), Gaps = 3/148 (2%)

Query: 51  FQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMIT 110
            +   A   I     RV I G   S  +G ++  +L   G  ++             ++ 
Sbjct: 146 AEVERAAVAIAGAS-RVNIFGASGSALVGEEMQFSLHRIGVAAWAWSDVHEGLASAALLG 204

Query: 111 RDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCP 170
             D+ + +S +G + E   +L  A       +A+T   +S +A  ADIVL      ++  
Sbjct: 205 AGDVALGISHTGQTRETIELLAEAGSRGATTVALTGFPRSPLAELADIVLVT--ASQATT 262

Query: 171 HGLAPTTSAIMQLAIGDALAIALLESRN 198
                 ++   QL + D L IA+ +  +
Sbjct: 263 FRPDALSARHPQLVVLDLLYIAVAQRTH 290


>gi|310765713|gb|ADP10663.1| putative transcriptional regulator [Erwinia sp. Ejp617]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/129 (19%), Positives = 49/129 (37%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L      +   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQANPQ---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFTEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|326318497|ref|YP_004236169.1| CBS domain-containing membrane protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
 gi|323375333|gb|ADX47602.1| CBS domain containing membrane protein [Acidovorax avenae subsp.
           avenae ATCC 19860]
          Length = 224

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/145 (18%), Positives = 48/145 (33%), Gaps = 11/145 (7%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +     G +     +     + +  S+  V     + DA   L+E       VVD    +
Sbjct: 70  YAQTEQGPQQARQPLTRVRDVMTSGSLS-VPPDVRVNDAWQTLAEYHVAQAPVVDAQGHV 128

Query: 264 KGIITEGDIFR----------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
            G++   D+                DL    V +VM+     +  +T L     +L    
Sbjct: 129 VGLLLRADMAPLDLLPEPGSVKAAIDLARRPVSEVMVSPVPTVAPNTELRRVAGVLLNTG 188

Query: 314 ISVLMVVDDCQKAIGIVHFLDLLRF 338
           +  L V D+     G +   D+LR 
Sbjct: 189 LPGLPVTDEHGTLAGFISRTDILRA 213



 Score = 38.3 bits (88), Expect = 1.6,   Method: Composition-based stats.
 Identities = 17/73 (23%), Positives = 21/73 (28%), Gaps = 1/73 (1%)

Query: 208 HPGG-KLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
            PG  K                 +P V     L     +L       + V DE   L G 
Sbjct: 145 EPGSVKAAIDLARRPVSEVMVSPVPTVAPNTELRRVAGVLLNTGLPGLPVTDEHGTLAGF 204

Query: 267 ITEGDIFRNFHKD 279
           I+  DI R    D
Sbjct: 205 ISRTDILRAVAAD 217


>gi|254517779|ref|ZP_05129835.1| glycine betaine/L-proline ABC transporter [Clostridium sp.
           7_2_43FAA]
 gi|226911528|gb|EEH96729.1| glycine betaine/L-proline ABC transporter [Clostridium sp.
           7_2_43FAA]
          Length = 375

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/106 (25%), Positives = 46/106 (43%), Gaps = 3/106 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V     L+ A  I+ EK+   + V+++   L G IT  +I +   K+     V
Sbjct: 254 MISKPVTVSPKRNLLQAREIMREKKVDSLLVINKLGTLLGYITLENIQKIEEKNKL---V 310

Query: 286 EDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
           E+VM K P  +  DT L   +++        L V D+  + +G+V 
Sbjct: 311 EEVMNKEPIWVSGDTSLPELLEVFNNLKKGYLPVCDEAYRLLGLVT 356



 Score = 51.8 bits (123), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 12/55 (21%), Positives = 26/55 (47%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             EDVMI  P  +     L  A +++R+  +  L+V++     +G +   ++ + 
Sbjct: 249 KAEDVMISKPVTVSPKRNLLQAREIMREKKVDSLLVINKLGTLLGYITLENIQKI 303


>gi|86130880|ref|ZP_01049479.1| putative nucleotidyltransferase DUF294 [Dokdonia donghaensis
           MED134]
 gi|85818291|gb|EAQ39451.1| putative nucleotidyltransferase DUF294 [Dokdonia donghaensis
           MED134]
          Length = 636

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/110 (20%), Positives = 47/110 (42%), Gaps = 8/110 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLSVEDVMI 290
                 + +A  ++   R G + VV   +   GI+T  ++        D      +D+MI
Sbjct: 177 CDPSATVQEAAQLMQSSRIGSL-VVTSNELPVGILTNRELRNAIASGTDTTNTLTKDIMI 235

Query: 291 KNPKVILEDTL-LTVAMQLLRQHNISVLMVV-DDCQK--AIGIVHFLDLL 336
            +P V     L +  A  +L ++ ++ L++  D   +   IGI+   D++
Sbjct: 236 -HPVVCTPGDLTVGQAQLMLIKYGVNHLVITKDGTDRSAIIGILSKHDIV 284



 Score = 42.6 bits (99), Expect = 0.088,   Method: Composition-based stats.
 Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
            KN         +  A QL++   I  L+V  +    +GI+ 
Sbjct: 171 SKNVVSCDPSATVQEAAQLMQSSRIGSLVVTSNE-LPVGILT 211


>gi|302335274|ref|YP_003800481.1| transcriptional regulator, RpiR family [Olsenella uli DSM 7084]
 gi|301319114|gb|ADK67601.1| transcriptional regulator, RpiR family [Olsenella uli DSM 7084]
          Length = 285

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/154 (18%), Positives = 55/154 (35%), Gaps = 2/154 (1%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
             S++ ++LQG    +    VE++ +    V I  +G S          +   G  +   
Sbjct: 104 AASAMNNALQGFDYRRLEGVVERMASADS-VNIYAVGVSATAALDFKQKMVRLGKQTNIE 162

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
             +        +  +D   +++S SG +  +   +   R      +AIT+  +S VA  A
Sbjct: 163 ENSSLLPSYAFLGGKDSFDLLVSHSGETPAIVECVQILRSLGRRTLAITAHPQSTVARMA 222

Query: 157 DIVLTLPKEPESCPHGLAPTTSAI-MQLAIGDAL 189
           D  +      +S         ++      I D L
Sbjct: 223 DDTILTHVGEDSSFSTKIEGFASFNAVHFILDCL 256


>gi|210631970|ref|ZP_03297135.1| hypothetical protein COLSTE_01025 [Collinsella stercoris DSM 13279]
 gi|210159772|gb|EEA90743.1| hypothetical protein COLSTE_01025 [Collinsella stercoris DSM 13279]
          Length = 270

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/143 (25%), Positives = 58/143 (40%), Gaps = 4/143 (2%)

Query: 60  IKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLS 119
           +      V   GIG SG   S   S L   G  +  +  A A +    +   + LI+ +S
Sbjct: 114 LAGAASEVFFFGIGMSGLSASMGESRLFRFGKRTKAITEAHAQNMQASLCDENSLIVAVS 173

Query: 120 WSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSA 179
            SG + +L   +  A+     ++AITS  +S +A  AD VL    +P     G    ++ 
Sbjct: 174 ISGETIDLIEAVSLAKESGAKVVAITSYLRSTLAELADYVLLSFGKPNYINAGA--FSTV 231

Query: 180 IMQLAIGDALAIALLESRNFSEN 202
           + QL I D +         FS  
Sbjct: 232 VSQLYILDLITSEYALR--FSAE 252


>gi|329668048|gb|AEB93996.1| transcriptional regulator [Lactobacillus johnsonii DPC 6026]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/145 (19%), Positives = 59/145 (40%), Gaps = 3/145 (2%)

Query: 52  QFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR 111
             + A+  +K    R+ + G+G SG     L      +     F      +   +     
Sbjct: 118 ALNQAINFLKTAD-RIYLAGVGASGLPAQDLYYKFIRSDKNVIFNQDIHIALERICYSHS 176

Query: 112 DDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPH 171
            D++++ S+SG + E+  +   AR+   P+IAIT  ++S +   +D+VL      +    
Sbjct: 177 TDVLVIFSYSGLTQEILLLAEQARKNHTPIIAITRSHQSPLVEISDVVL--GVSTDEKLL 234

Query: 172 GLAPTTSAIMQLAIGDALAIALLES 196
            +    S   ++ +   L +A +  
Sbjct: 235 RVGAINSLFSEVFVSSVLFLATINQ 259


>gi|289450696|ref|YP_003474839.1| RpiR family transcriptional regulator [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
 gi|289185243|gb|ADC91668.1| transcriptional regulator, RpiR family [Clostridiales genomosp.
           BVAB3 str. UPII9-5]
          Length = 307

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/159 (19%), Positives = 58/159 (36%), Gaps = 5/159 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPS-FFVH 97
           ++L+ +L   + F    A   I     +++  G G S  +  + A     T  P  F + 
Sbjct: 132 TALQQTLN-LIDFNAVTAAADILCRSEKILCMGQGGSMIMAQEAAHLFT-TALPGYFAIA 189

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
            +         +T  D ++  S+SG++ +L  +     + +   I +T    S     AD
Sbjct: 190 DSHLQAIVATQLTAKDAVLYFSYSGATRDLLEVQPIVHKSAAKFILVTRFPCSPGGKAAD 249

Query: 158 IVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
           +VL           G     + I QL + D L   +   
Sbjct: 250 VVLQCGSNENPLQLGSI--AARIAQLFVLDILFTEVCRR 286


>gi|29840256|ref|NP_829362.1| magnesium transporter [Chlamydophila caviae GPIC]
 gi|29834604|gb|AAP05240.1| magnesium transporter [Chlamydophila caviae GPIC]
          Length = 470

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 156 METTVKDVSACIRNNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEMSLKQIMH 211

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D      + L+ ++ I+ L VVD+    IG + + D++  
Sbjct: 212 QVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEA 259



 Score = 40.7 bits (94), Expect = 0.33,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V       + + ++   +   + VVDE   L G IT  D+      D+   ++
Sbjct: 210 MHQVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEAIE-DIADETI 268

Query: 286 EDVM 289
             + 
Sbjct: 269 ARMA 272


>gi|325838787|ref|ZP_08166656.1| SIS domain protein [Turicibacter sp. HGF1]
 gi|325490730|gb|EGC93038.1| SIS domain protein [Turicibacter sp. HGF1]
          Length = 247

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 5/133 (3%)

Query: 38  LSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVH 97
           L  L+   + E S Q + A   I   + +V+  G G SG +    A    S G  ++ + 
Sbjct: 86  LDYLQKMNKEEKSRQLYEAASLICQAQ-KVIFIGAGSSGIMAKYGARCFNSMGKLTYCID 144

Query: 98  AAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHAD 157
                  D   I    +I+ LS SG   +L   +   +  +  +I IT+   + +A  AD
Sbjct: 145 DPFYPIPD--EIYEGAVIVALSVSGEIPQLINRVNKFKNSNATIITITNSQDNTIAKMAD 202

Query: 158 IVL--TLPKEPES 168
           + L   +P E   
Sbjct: 203 LSLFYHVPVENFD 215


>gi|302561756|ref|ZP_07314098.1| IMP dehydrogenase [Streptomyces griseoflavus Tu4000]
 gi|302479374|gb|EFL42467.1| IMP dehydrogenase [Streptomyces griseoflavus Tu4000]
          Length = 483

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/130 (19%), Positives = 47/130 (36%), Gaps = 4/130 (3%)

Query: 209 PGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIIT 268
           P   +  +        H  D+  ++     + DA+ +L ++      VVD   +  G++T
Sbjct: 81  PIEVVTEVVSWVKGRHHVLDTPIVLAPHQTVADALALLPKRAHNAGVVVDADHRPVGVVT 140

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
           + D+            + +VM ++  +I   T    A   L   N      VD   +  G
Sbjct: 141 DTDL----SGVDRFTQLTEVMSRDLILIDAGTDPREAFNTLDGANRRYAPAVDGEGRLAG 196

Query: 329 IVHFLDLLRF 338
           I+     LR 
Sbjct: 197 ILTRKGALRA 206


>gi|76819482|ref|YP_336586.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|76583955|gb|ABA53429.1| CBS domain protein [Burkholderia pseudomallei 1710b]
          Length = 211

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/123 (21%), Positives = 50/123 (40%), Gaps = 6/123 (4%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQK---LKGIITEGDIFRNF 276
            +        +   +    ++DA  ++ ++  G + VVD+        G++T+ DI  + 
Sbjct: 63  VNAAEICTREVVACRRTDTVLDAAHLMRDRHVGDLIVVDDAGHAHAPVGMLTDRDIVLSL 122

Query: 277 HK---DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                D   L V ++M     V+ E   L    Q +R   +  + VV+     +G+V   
Sbjct: 123 IAKGVDPAALFVGEIMSAPAAVVHEHDSLWTIAQRMRLTGVRRMPVVNADGALVGMVSVD 182

Query: 334 DLL 336
           DLL
Sbjct: 183 DLL 185


>gi|94972285|ref|YP_594325.1| RpiR family transcriptional regulator [Deinococcus geothermalis DSM
           11300]
 gi|94554336|gb|ABF44251.1| transcriptional regulator, RpiR family [Deinococcus geothermalis
           DSM 11300]
          Length = 290

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 33/161 (20%), Positives = 69/161 (42%), Gaps = 5/161 (3%)

Query: 39  SSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
           ++L+ +L+      F  AV+ +   +  + + G+G SG +           G        
Sbjct: 111 TALDDTLEHLNLEAFSAAVQAMTLAR-HIELIGMGASGVVALSGQYRGLRLGLSCRASTD 169

Query: 99  AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADI 158
                    ++   D++I +S+SG+  ++      AR+    ++A+T   ++ ++     
Sbjct: 170 PGTFLSTCSLLEPTDVLIAVSFSGTRPQVVQAARLARQAGAIVVALTGLGRTPLSKVVHH 229

Query: 159 VLTLPKE-PESCPHGLAPTTSAIMQLAIGDALAIALLESRN 198
            LT+        P GLA   + I Q+AI DAL  +L  +++
Sbjct: 230 TLTVSAPGDRYRPEGLA---TQIPQVAILDALFTSLHVAQD 267


>gi|322375683|ref|ZP_08050195.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus sp. C300]
 gi|321279391|gb|EFX56432.1| putative phosphosugar-binding transcriptional regulator
           [Streptococcus sp. C300]
          Length = 283

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 37/212 (17%), Positives = 67/212 (31%), Gaps = 11/212 (5%)

Query: 3   FYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKA 62
            +    ++     HS   +   +  LRS    +     L          Q     + I  
Sbjct: 70  VFQYQHQASKPDTHSHKHSPLTKRVLRSYSIMREQTQDLIDE------EQLERVAQLIDD 123

Query: 63  IKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSG 122
            + RV   G G SG I  ++       G     +   +       ++  + L++  S SG
Sbjct: 124 AE-RVYFFGTGSSGLIAREMKLRFMRLGVVCEALTDQDGFAWTTSIMDENCLVLGFSLSG 182

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
           ++  +   L  A+      I  TS        + + VL       S    +   ++ +  
Sbjct: 183 TTQSVLDSLLDAKDMGAKTILFTSAPNKNSQAYTETVLVASHSQSSY---IQRISAQLPM 239

Query: 183 LAIGDAL-AIALLESRNFSENDFYVLHPGGKL 213
           L + D + A  L  +R   E  F       KL
Sbjct: 240 LILIDLIYAYFLEINRESKEKIFNSYWENKKL 271


>gi|256957760|ref|ZP_05561931.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|257080022|ref|ZP_05574383.1| transcriptional regulator [Enterococcus faecalis JH1]
 gi|294779250|ref|ZP_06744655.1| SIS domain protein [Enterococcus faecalis PC1.1]
 gi|256948256|gb|EEU64888.1| transcriptional regulator [Enterococcus faecalis DS5]
 gi|256988052|gb|EEU75354.1| transcriptional regulator [Enterococcus faecalis JH1]
 gi|294453679|gb|EFG22076.1| SIS domain protein [Enterococcus faecalis PC1.1]
          Length = 253

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 41/189 (21%), Positives = 79/189 (41%), Gaps = 11/189 (5%)

Query: 10  SVTRKGHSLMKNSTVQCALRSIIAE-----KRGLSSLESSLQGELSFQ-FHCAVEKIKAI 63
            +   G S +K +  + A ++   E        + +    L  E  ++    A++ I   
Sbjct: 53  KMGYAGFSELKYAVKEEAKQTQTFENFYDTTVHVDAFLKKLNQETYYEMLRPAIQMIVQA 112

Query: 64  KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGS 123
           +  V  TGIG SG +GS  +   A+    S+ +          G    + L ++LS SG 
Sbjct: 113 R-HVAFTGIGTSGILGSYGSRYFANLNINSYSIADPFTPIPKRGF--ENTLALILSVSGE 169

Query: 124 SDELKAILYYARRFSIPLIAITSENKSVVACHADIVLT--LPKEPESCPHGLAPTTSAIM 181
           ++E+   +   +     +++IT+   S +A  AD  ++  +P E          TT+ I 
Sbjct: 170 TNEMIKQMTDFKTAGAKVLSITNNQHSTIARLADYNISYYMPDERSPFADKSVNTTTQIP 229

Query: 182 QLAIGDALA 190
            +A+ + LA
Sbjct: 230 VIALIELLA 238


>gi|195566091|ref|XP_002106624.1| GD16985 [Drosophila simulans]
 gi|194204006|gb|EDX17582.1| GD16985 [Drosophila simulans]
          Length = 527

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 22/190 (11%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGK 212
           + L           AP  S+ M       +AIA+       +   N +     +      
Sbjct: 69  VDLSSPLTKSLTLRAPLVSSPMDTVTESEMAIAMALCGGIGIIHHNCTPEYQAL------ 122

Query: 213 LGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                       H     P V      + D +    +  F    V + G    KL G++T
Sbjct: 123 ---EVHKVKKYKHGFMRDPSVMSPTNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVT 179

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +F ++   + + D+M            L  A  +L +     L +V+   + + 
Sbjct: 180 SRDI--DFRENQPEVLLADIMTTELVTAPNGINLPTANAILEKSKKGKLPIVNQAGELVA 237

Query: 329 IVHFLDLLRF 338
           ++   DL + 
Sbjct: 238 MIARTDLKKA 247


>gi|154487114|ref|ZP_02028521.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
           L2-32]
 gi|154084977|gb|EDN84022.1| hypothetical protein BIFADO_00954 [Bifidobacterium adolescentis
           L2-32]
          Length = 692

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 19/144 (13%), Positives = 43/144 (29%), Gaps = 29/144 (20%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
            T       +M       L      +   +          + VV+   +L G +++GD+ 
Sbjct: 532 QTQEQSIGGIMDDHPYSCLDSDD--ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVM 589

Query: 274 RNFH---------------------------KDLNTLSVEDVMIKNPKVILEDTLLTVAM 306
           ++                             + L+   V D+  +       D  +    
Sbjct: 590 KSIATYESRTVSTGTGSTMVVFDDETVASKVQALSGKKVMDIATRKVVAATPDQHVGEVA 649

Query: 307 QLLRQHNISVLMVVDDCQKAIGIV 330
           ++L +     L VVD   + +G++
Sbjct: 650 RILAKKQFKKLPVVDGDGRLVGVI 673



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/60 (23%), Positives = 29/60 (48%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K     S+  +M  +P   L+   +T  ++   + N+S L VV+   + +G V   D+++
Sbjct: 531 KQTQEQSIGGIMDDHPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVMK 590


>gi|91093403|ref|XP_966518.1| PREDICTED: similar to inosine-5-monophosphate dehydrogenase isoform
           1 [Tribolium castaneum]
 gi|270015409|gb|EFA11857.1| hypothetical protein TcasGA2_TC005099 [Tribolium castaneum]
          Length = 513

 Score = 64.1 bits (155), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/173 (16%), Positives = 60/173 (34%), Gaps = 8/173 (4%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSIPL 232
            +P  S+ M      ++AIA+           +            +      H     P+
Sbjct: 56  KSPLVSSPMDTVTESSMAIAMALCGGIG--VIHHNCSPSYQANEVLKVKKYKHGFIHNPV 113

Query: 233 V-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           V      + D +    E+ F  + + ++G    KL GI+T  D+     ++ +   +E +
Sbjct: 114 VLCPTNTVADVLKTKKEQGFSGIPITEDGKMGGKLVGIVTSRDLDFLEDQNYSNSKLETI 173

Query: 289 MIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           M K  +         L  A  +L +     L +V+     + ++   DL +  
Sbjct: 174 MTKLEDLVTAQSGVTLPEANSILAKSKKGKLPIVNAEGNLVALMARTDLKKAK 226


>gi|89900422|ref|YP_522893.1| CBS domain-containing protein [Rhodoferax ferrireducens T118]
 gi|89345159|gb|ABD69362.1| CBS domain containing membrane protein [Rhodoferax ferrireducens
           T118]
          Length = 211

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/146 (21%), Positives = 54/146 (36%), Gaps = 12/146 (8%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           +     G       +   D + S   I L+     + DA   L+ +  G   V++    L
Sbjct: 56  YAESQKGVTQPRHPLKLVDALMSRAVITLLD-TATVQDAWQTLARQGVGQAPVLNAAGTL 114

Query: 264 KGIITEGDIFR-----------NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQH 312
            G+++  D+ R              + L   SV D+M      +  DT +    ++L   
Sbjct: 115 VGLLSRADLLRPERLPTPDSHALVWRALLAQSVLDIMWTPVPSVAPDTDIRRVARVLLDA 174

Query: 313 NISVLMVVDDCQKAIGIVHFLDLLRF 338
            +  L VVD+    IG V   D+LR 
Sbjct: 175 GLPGLPVVDEQGLVIGFVSRSDILRA 200



 Score = 35.6 bits (81), Expect = 9.7,   Method: Composition-based stats.
 Identities = 11/47 (23%), Positives = 18/47 (38%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
           V     +     +L +     + VVDE   + G ++  DI R    D
Sbjct: 158 VAPDTDIRRVARVLLDAGLPGLPVVDEQGLVIGFVSRSDILRAVVTD 204


>gi|237511946|gb|ACQ99689.1| putative bile efflux protein [Bifidobacterium breve UCC2003]
          Length = 683

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 15/119 (12%), Positives = 39/119 (32%), Gaps = 27/119 (22%)

Query: 239 LIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------------------- 277
           +   +          + VV+   +L G +++GD+ ++                       
Sbjct: 546 ITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLKSIATYESRTVSTGTGSTMVVFDDE 605

Query: 278 ------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                 + L+   V D+  +       D  +    ++L +     L VV+   + +G++
Sbjct: 606 TVASKVQALSGKKVMDIATRKVVTATPDQHVGEVARILAKKQFKKLPVVNGDGRLVGVI 664



 Score = 37.6 bits (86), Expect = 2.8,   Method: Composition-based stats.
 Identities = 15/60 (25%), Positives = 28/60 (46%)

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           K     S+  +M   P   L+   +T  ++   + N+S L VV+   + +G V   D+L+
Sbjct: 522 KQAQEQSIGGIMDDQPYSCLDSDDITHVVREFIRLNVSSLPVVNGDGRLVGFVSDGDVLK 581


>gi|237729842|ref|ZP_04560323.1| transcriptional regulator [Citrobacter sp. 30_2]
 gi|226908448|gb|EEH94366.1| transcriptional regulator [Citrobacter sp. 30_2]
          Length = 242

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 5/123 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ I + + R++  G G SG +    A   ++ G  S  +         
Sbjct: 94  NDEFDNLLDQAVDIILSSE-RIIFVGAGTSGALAKYGARFFSNVGKFSNHIDDPYFPVTN 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    R+ L IVLS SG ++E+          +  ++++TS   S +A  AD  L+   
Sbjct: 153 DM---ARNALAIVLSVSGETEEILRFASQFSLHNCKVLSVTSHEHSRLAKLADFNLSWHV 209

Query: 165 EPE 167
              
Sbjct: 210 PQT 212


>gi|53723247|ref|YP_112232.1| hypothetical protein BPSS2229 [Burkholderia pseudomallei K96243]
 gi|76817462|ref|YP_336517.1| CBS domain-containing protein [Burkholderia pseudomallei 1710b]
 gi|126445238|ref|YP_001064130.1| CBS domain-containing protein [Burkholderia pseudomallei 668]
 gi|126456333|ref|YP_001077040.1| CBS domain-containing protein [Burkholderia pseudomallei 1106a]
 gi|134281850|ref|ZP_01768557.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|167725303|ref|ZP_02408539.1| CBS domain protein [Burkholderia pseudomallei DM98]
 gi|167744227|ref|ZP_02417001.1| CBS domain protein [Burkholderia pseudomallei 14]
 gi|167821425|ref|ZP_02453105.1| CBS domain protein [Burkholderia pseudomallei 91]
 gi|167829768|ref|ZP_02461239.1| CBS domain protein [Burkholderia pseudomallei 9]
 gi|167899869|ref|ZP_02487270.1| CBS domain protein [Burkholderia pseudomallei 7894]
 gi|167908185|ref|ZP_02495390.1| CBS domain protein [Burkholderia pseudomallei NCTC 13177]
 gi|167916529|ref|ZP_02503620.1| CBS domain protein [Burkholderia pseudomallei 112]
 gi|167924387|ref|ZP_02511478.1| CBS domain protein [Burkholderia pseudomallei BCC215]
 gi|217424186|ref|ZP_03455685.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|226194125|ref|ZP_03789725.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|242310999|ref|ZP_04810016.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|254182541|ref|ZP_04889135.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|254187092|ref|ZP_04893607.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|254192487|ref|ZP_04898926.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|254262960|ref|ZP_04953825.1| CBS domain protein [Burkholderia pseudomallei 1710a]
 gi|254296518|ref|ZP_04963974.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|52213661|emb|CAH39715.1| conserved hypothetical protein [Burkholderia pseudomallei K96243]
 gi|76581935|gb|ABA51409.1| CBS domains [Burkholderia pseudomallei 1710b]
 gi|126224729|gb|ABN88234.1| CBS domain protein [Burkholderia pseudomallei 668]
 gi|126230101|gb|ABN93514.1| CBS domain protein [Burkholderia pseudomallei 1106a]
 gi|134246912|gb|EBA46999.1| CBS domain protein [Burkholderia pseudomallei 305]
 gi|157806529|gb|EDO83699.1| CBS domain protein [Burkholderia pseudomallei 406e]
 gi|157934775|gb|EDO90445.1| CBS domain protein [Burkholderia pseudomallei Pasteur 52237]
 gi|169649245|gb|EDS81938.1| CBS domain protein [Burkholderia pseudomallei S13]
 gi|184213076|gb|EDU10119.1| CBS domain protein [Burkholderia pseudomallei 1655]
 gi|217392651|gb|EEC32674.1| CBS domain protein [Burkholderia pseudomallei 576]
 gi|225933818|gb|EEH29805.1| CBS domain protein [Burkholderia pseudomallei Pakistan 9]
 gi|242134238|gb|EES20641.1| CBS domain protein [Burkholderia pseudomallei 1106b]
 gi|254213962|gb|EET03347.1| CBS domain protein [Burkholderia pseudomallei 1710a]
          Length = 143

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 18/113 (15%), Positives = 43/113 (38%), Gaps = 5/113 (4%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN-TL 283
               +  V     +  A  +++    G + V  +  +L G+IT+ D+  R          
Sbjct: 8   MSRDVVHVAPSDSIRHAAELMARFDIGALPVC-QNSRLIGMITDRDLAVRAVSAGKAPDT 66

Query: 284 SVEDVMIKNPK-VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            V ++    P     +D  +    + +    +  + VVD  ++ +G++   D+
Sbjct: 67  KVHEIAS-GPIEWCFDDDQVDNVQKYMADAQVRRMPVVDHDKRLVGMLSIGDI 118



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + ++M ++   +     +  A +L+ + +I  L V     + IG++   DL
Sbjct: 2   QRINEIMSRDVVHVAPSDSIRHAAELMARFDIGALPVC-QNSRLIGMITDRDL 53


>gi|172056185|ref|YP_001812645.1| glucosamine--fructose-6-phosphate aminotransferase [Exiguobacterium
           sibiricum 255-15]
 gi|171988706|gb|ACB59628.1| glucosamine--fructose-6-phosphate aminotransferase, isomerizing
           [Exiguobacterium sibiricum 255-15]
          Length = 598

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 50/214 (23%), Positives = 91/214 (42%), Gaps = 20/214 (9%)

Query: 15  GHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSF-QFHCAVEKIKAIKGRVVITGIG 73
            H ++K    Q A+         + ++    Q E        +V  +   + RV I G G
Sbjct: 247 AHYMLKEMDEQPAV---------IRNIVQKYQNESGEITLDQSVRDLVLGRDRVYIIGCG 297

Query: 74  KS---GHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAI 130
            S   G IG +L   +A  G P+    ++E    ++ ++T   L + LS SG + + +A+
Sbjct: 298 TSYHAGLIGKQLIEQIA--GIPTEVHISSE-FGYNMPLLTEKPLFLFLSQSGETADSRAV 354

Query: 131 LYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALA 190
           L  A++   P + IT+   S ++  A+  L L   PE     +A T +   Q+A+   LA
Sbjct: 355 LVEAKKLGHPALTITNVAGSTLSREANATLLLHAGPEIA---VASTKAYTAQIAVLAVLA 411

Query: 191 IALLESRNFSENDFYVLHPGGKLGTLFVCASDVM 224
             L +++    N F ++   GK+ +         
Sbjct: 412 FDLAQAKGVDVN-FDLMKELGKISSAMESVMSQK 444


>gi|330504551|ref|YP_004381420.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
 gi|328918837|gb|AEB59668.1| CBS domain-containing protein [Pseudomonas mendocina NK-01]
          Length = 141

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 5/107 (4%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN----TLSVEDVMIK 291
              L  AI  L E R     VVD    L G+++EGD  R             +V   M  
Sbjct: 21  DTDLFTAINRLLEHRISGAPVVDSQGHLVGLLSEGDCLRGILSGAYYEAVGGTVSTYMTT 80

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             + +  +  +    +   +     + V+ +  + +G +   D+LR 
Sbjct: 81  AVETVSPEADIIELSERFLRGRRRRMPVI-ENGRLVGQISRHDVLRA 126



 Score = 61.1 bits (147), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
           L ++ V D M ++      DT L  A+  L +H IS   VVD     +G++   D LR G
Sbjct: 2   LKSIKVRDYMTRHLVTFRSDTDLFTAINRLLEHRISGAPVVDSQGHLVGLLSEGDCLR-G 60

Query: 340 II 341
           I+
Sbjct: 61  IL 62


>gi|302385622|ref|YP_003821444.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
 gi|302196250|gb|ADL03821.1| transcriptional regulator, RpiR family [Clostridium saccharolyticum
           WM1]
          Length = 284

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 32/165 (19%), Positives = 58/165 (35%), Gaps = 11/165 (6%)

Query: 31  IIAEKRGLSSLESSLQGELSFQFHCAVEKIKA-----------IKGRVVITGIGKSGHIG 79
           II+++  L +L   +   +   F     ++                R+ + GIG S    
Sbjct: 87  IISKEDDLDTLCRKMDALVDAAFQDFFYQLNKDALKKAINKIKKARRIYLVGIGSSSLPA 146

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
             L   L      + F             I + D++I  S+SG S E+      A +   
Sbjct: 147 YDLFHKLKRADLNANFYQDINMMVEFFNYIDKRDVVIAFSYSGQSQEVLYACGIAEKQGA 206

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLA 184
            +IA+T    S +   AD+ L +P   +    G   +    + +A
Sbjct: 207 SIIAVTRRRDSPLQDLADLCLHVPDNEKVMRIGAFTSLHTSIMMA 251


>gi|225027598|ref|ZP_03716790.1| hypothetical protein EUBHAL_01855 [Eubacterium hallii DSM 3353]
 gi|224955114|gb|EEG36323.1| hypothetical protein EUBHAL_01855 [Eubacterium hallii DSM 3353]
          Length = 277

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/141 (15%), Positives = 46/141 (32%), Gaps = 3/141 (2%)

Query: 38  LSSLESSLQGELSFQFHCAVEKI---KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           L++ +  L    S      +E+I        +V++ G G SG    ++       G    
Sbjct: 93  LNAYQELLNRSYSLVDEKQIERIGNYLNATKKVIVCGKGSSGLAAREMEIRFMRIGVDVD 152

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
            +   +           + L+   S  G  +E+  +L  A++     +  T+ N+     
Sbjct: 153 SITDTDLMRMQAVFQNENSLVFGFSIGGQKEEVIFLLKEAKKRGAKTVLFTANNRDDYKE 212

Query: 155 HADIVLTLPKEPESCPHGLAP 175
               VL +P         +  
Sbjct: 213 FCTEVLLIPSLRHLNHGNVIS 233


>gi|170016819|ref|YP_001727738.1| transcriptional regulator [Leuconostoc citreum KM20]
 gi|169803676|gb|ACA82294.1| Transcriptional regulator [Leuconostoc citreum KM20]
          Length = 283

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 39/203 (19%), Positives = 65/203 (32%), Gaps = 6/203 (2%)

Query: 1   MHFYFSHFKSVTRKGHSLMKNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKI 60
           +    +    V   G     + T   A +        L +  + L   +      A   +
Sbjct: 72  LASATTTLSPVDFFGEITDNDDTDAIAQKVFAGASNALKATVNHLTASM---LDTATHYL 128

Query: 61  KAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSW 120
            A   RV   GIG S  +          T          +        +   D  +V+S 
Sbjct: 129 VAA-NRVGFFGIGGSSLVAFNAYHKFLRTPLNVIAHPDYDIQLMQAVKLNNHDAAVVISH 187

Query: 121 SGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAI 180
           SG + +   I    +   + +IAIT+  +S +A  AD+VL      E         +S I
Sbjct: 188 SGRNKDTLLIAQKLKENHVKVIAITAFAESPLAKSADLVLL--SLAEEINFRSESMSSLI 245

Query: 181 MQLAIGDALAIALLESRNFSEND 203
            Q+ I D L   +    +    D
Sbjct: 246 AQITIIDTLFTLVGSQLSTRTQD 268


>gi|163744207|ref|ZP_02151567.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
 gi|161381025|gb|EDQ05434.1| CBS domain protein [Oceanibulbus indolifex HEL-45]
          Length = 133

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/109 (20%), Positives = 41/109 (37%), Gaps = 5/109 (4%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL----SVEDVM 289
           +    ++ A+  + EKR     VVD   +L G++++ D  R              V   M
Sbjct: 19  RPEFEILHAMNAMLEKRLSGAPVVDNEGRLVGVLSKKDCLRAALNGAYYQEWGGQVAAYM 78

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
             +P+ +  D  L  A +     +     V+      +G +   D+LR 
Sbjct: 79  SAHPETLDADLDLVTAAEWFLHSDYRRFPVL-RGGNLVGQISRADILRA 126



 Score = 54.1 bits (129), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 12/56 (21%), Positives = 26/56 (46%)

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
           + D M  +  +   +  +  AM  + +  +S   VVD+  + +G++   D LR  +
Sbjct: 7   IADYMAVDLVLFRPEFEILHAMNAMLEKRLSGAPVVDNEGRLVGVLSKKDCLRAAL 62


>gi|153833730|ref|ZP_01986397.1| transcriptional regulator [Vibrio harveyi HY01]
 gi|269959885|ref|ZP_06174262.1| HTH-type transcriptional regulator hexR [Vibrio harveyi 1DA3]
 gi|148869902|gb|EDL68865.1| transcriptional regulator [Vibrio harveyi HY01]
 gi|269835184|gb|EEZ89266.1| HTH-type transcriptional regulator hexR [Vibrio harveyi 1DA3]
          Length = 287

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 29/155 (18%), Positives = 62/155 (40%), Gaps = 3/155 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           +      AV  +   +  + I   G S     ++   L   G P    +    S      
Sbjct: 113 VEEDIDTAVNWLHNARQVICIGMGGGSTIAAQEMQHRLFRLGYPVVAYNDGLLSRMIAAT 172

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
              +D+++++S +G +  +      A+++ + +I IT +  + +   AD+VL +  +   
Sbjct: 173 ADANDVLVMISATGYTPAIIETAQLAKQYGVKVIVITPK-DTPLTEQADLVLPIEHQETD 231

Query: 169 CPHGLAPTTSAIMQLAIGDALAIALLESRNFSEND 203
             +   P+ S    LA+ D L++AL  +      D
Sbjct: 232 FIYK--PSASRYAMLALVDVLSMALAVNHKRRSRD 264


>gi|92116457|ref|YP_576186.1| XRE family transcriptional regulator [Nitrobacter hamburgensis X14]
 gi|91799351|gb|ABE61726.1| putative transcriptional regulator, XRE family [Nitrobacter
           hamburgensis X14]
          Length = 170

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 27/121 (22%), Positives = 53/121 (43%), Gaps = 5/121 (4%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKD 279
           +   G  +  +     +  A   L  K  G + VV  G  + G+I+E +I   F    + 
Sbjct: 34  LRRKGTDVTTIGPEANIKSAAGWLRAKNIGAL-VVTSGDAILGLISEREIVDAFFRYGET 92

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFG 339
             ++ V+++M +    +  D  +T  M L+  H +  L V+    K  GIV   D++++ 
Sbjct: 93  AGSMRVKEIMQRGVTTVSPDESVTRVMNLMTHHRVRHLPVL-LGGKLAGIVSIGDVVKYR 151

Query: 340 I 340
           +
Sbjct: 152 L 152


>gi|91786122|ref|YP_547074.1| CBS domain-containing protein [Polaromonas sp. JS666]
 gi|91695347|gb|ABE42176.1| CBS domain containing membrane protein [Polaromonas sp. JS666]
          Length = 401

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/66 (31%), Positives = 28/66 (42%)

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
            R + + L  L   DVM +    +   T L  A  LLR   I  L VVD   +  GI+  
Sbjct: 243 LRAYDRKLAELRCADVMSRELVTVQFGTPLQEAWALLRSRRIKALPVVDRAFRIAGIITV 302

Query: 333 LDLLRF 338
            D +R 
Sbjct: 303 ADFMRA 308



 Score = 57.6 bits (138), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 26/134 (19%), Positives = 49/134 (36%), Gaps = 21/134 (15%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
               +  V+ G PL +A  +L  +R   + VVD   ++ GIIT  D  R    D+     
Sbjct: 259 MSRELVTVQFGTPLQEAWALLRSRRIKALPVVDRAFRIAGIITVADFMRAAELDVYEGFE 318

Query: 283 ------------------LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQ 324
                               V  +M +N +V      L   + L        + ++ + +
Sbjct: 319 DKLRTLVRTTRSVYASKPEVVGQIMTRNVRVAGMQRRLLDLIPLFGSTGHHHIPILGEGE 378

Query: 325 KAIGIVHFLDLLRF 338
           + +G++   DL+  
Sbjct: 379 RLVGMITQSDLVAA 392


>gi|283769475|ref|ZP_06342371.1| inosine 5-monophosphate dehydrogenase [Bulleidia extructa W1219]
 gi|283103743|gb|EFC05129.1| inosine 5-monophosphate dehydrogenase [Bulleidia extructa W1219]
          Length = 501

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 35/171 (20%), Positives = 62/171 (36%), Gaps = 12/171 (7%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRN--FSENDFYVLHPGGKLGTLFVCAS 221
           K   +      P  SA+MQ    D LAIAL +     F      +      +  +    +
Sbjct: 42  KGENAPLKLNIPMVSAVMQSVSDDRLAIALAKEGGISFIFGSQSISSQADMVERVKNYKA 101

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHK 278
             + S  ++        L D + I  E     + V ++G    KL G++T  D      +
Sbjct: 102 GFVVSDANL---MPTSTLQDLLHIFEETGHHTMPVTEDGTSHGKLLGLVTSRDYR--LSR 156

Query: 279 DLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
              T  V+  M          + T L+ A  ++  H ++ L ++D+ Q   
Sbjct: 157 MEPTTLVKTFMTPFDELVTAPKTTSLSEANDIIWDHKLNTLPIIDENQNLC 207


>gi|116493638|ref|YP_805372.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Lactobacillus casei ATCC 334]
 gi|116103788|gb|ABJ68930.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Lactobacillus casei ATCC 334]
          Length = 417

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  L +AI ++ ++R   + V D+   LKG I   D+     +  +  SV D++  +
Sbjct: 268 ITPGKSLAEAILLMRKRRVDTLLVTDDENHLKGFI---DLESLETRYQSATSVGDIIKTS 324

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +D+LL      + +  +  + VVD  +K +GIV 
Sbjct: 325 IFYVNKDSLLRDTADRILKRGLKYVPVVDHDKKLVGIVT 363



 Score = 59.1 bits (142), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      +  +VE +M+KNP  I     L  A+ L+R+  +  L+V DD     G +  
Sbjct: 246 RLVQARADVTTVEQIMLKNPAAITPGKSLAEAILLMRKRRVDTLLVTDDENHLKGFIDL 304


>gi|269966454|ref|ZP_06180538.1| hypothetical protein VMC_19680 [Vibrio alginolyticus 40B]
 gi|269828911|gb|EEZ83161.1| hypothetical protein VMC_19680 [Vibrio alginolyticus 40B]
          Length = 270

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 20/79 (25%), Positives = 44/79 (55%), Gaps = 3/79 (3%)

Query: 262 KLKGIITEGDI-FRNFHKDLNT-LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMV 319
           +L GI+T+ D+  R   + ++T + V +VM  +   +  +  +  AM  + ++N+  L +
Sbjct: 25  QLLGILTDRDLCIRVLAQGIDTNIPVSEVMSYDVVSLDYNAYVFEAMLTMLRYNVHHLPI 84

Query: 320 VDDCQKAIGIVHFLDLLRF 338
           +   +K IGI+   D++R+
Sbjct: 85  L-KDKKPIGIIGMTDIVRY 102


>gi|229542142|ref|ZP_04431202.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
 gi|229326562|gb|EEN92237.1| glucosamine/fructose-6-phosphate aminotransferase, isomerizing
           [Bacillus coagulans 36D1]
          Length = 600

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 61/301 (20%), Positives = 116/301 (38%), Gaps = 46/301 (15%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKS---GHIGSKLASTLASTGTP 92
           R +      + G+LS      ++ +     R+ I   G S   G +G +L   LA    P
Sbjct: 264 RKIIQAYQDINGKLSVD-SQIIDAVTEAD-RLYIIACGTSYHAGLVGKQLIEKLAK--IP 319

Query: 93  SFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
                ++E    ++ +++   L I +S SG + + +A+L   +      + +T+   S +
Sbjct: 320 VEVHVSSEFV-YNMPLLSEKPLFIFISQSGETADSRAVLVKVKELGYKTLTMTNVPGSTL 378

Query: 153 ACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGK 212
           +  AD  L L   PE     +A T +   Q+A+   LA    +SR FS  DF ++H  G 
Sbjct: 379 SREADYTLLLHAGPEIA---VASTKAYTAQIAVLAILADVAAKSRGFS-EDFDLVHELGL 434

Query: 213 LGTLFV----CASDVMHSGDSIPLVKIGC-----------------PLIDAITILSEK-- 249
           +            ++         V   C                  L +   I +E   
Sbjct: 435 VANAMEVLCGSKEEIEQMAYDYLTVTRNCFFIGRSMDYFVCLEGALKLKEISYIQAEGFA 494

Query: 250 ----RFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIK--NPKVILEDTLLT 303
               + G +A++++G  +  + T+ D+  +   +     V++V+ +  NP VI    L  
Sbjct: 495 GGELKHGTIALIEDGTPVVALATQKDVNWSIRGN-----VKEVVTRGANPCVISMKGLNE 549

Query: 304 V 304
            
Sbjct: 550 E 550


>gi|147919878|ref|YP_686371.1| hypothetical protein RCIX1867 [uncultured methanogenic archaeon
           RC-I]
 gi|110621767|emb|CAJ37045.1| conserved hypothetical CBS domain protein [uncultured methanogenic
           archaeon RC-I]
          Length = 283

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/114 (21%), Positives = 52/114 (45%), Gaps = 9/114 (7%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--------KDLNTLS 284
           V     +  A  ++       +AVVDE  +L+GI++  D+    +        + L+ + 
Sbjct: 15  VSARDNMARARNLMLRNGVSRLAVVDE-GRLRGIVSRKDLGMRLNQSEPQWRRRPLDQVP 73

Query: 285 VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           V+ +M  +P  +     +    + +   ++S L+V  D Q  +GIV   DL+++
Sbjct: 74  VDLIMTPDPVTVEPSDEIQAVARTMLDRDVSSLIVYTDPQGVLGIVTKFDLVKY 127



 Score = 57.2 bits (137), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 25/183 (13%), Positives = 64/183 (34%), Gaps = 6/183 (3%)

Query: 159 VLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNF-SEND--FYVLHPGGKLGT 215
           +++ P    S    +A   + +++  +     +     R   S  D    +     +   
Sbjct: 7   IMSAPVFAVSARDNMARARNLMLRNGVSRLAVVDEGRLRGIVSRKDLGMRLNQSEPQWRR 66

Query: 216 L-FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFR 274
                    +        V+    +      + ++    + V  + Q + GI+T+ D+ +
Sbjct: 67  RPLDQVPVDLIMTPDPVTVEPSDEIQAVARTMLDRDVSSLIVYTDPQGVLGIVTKFDLVK 126

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI--GIVHF 332
            F      L V D+M   P  +     +   + ++ ++N   ++V D   + +  G++  
Sbjct: 127 YFTLVGCPLRVGDMMSGKPPTVSRLHTINSVLDIMAENNTDRVVVTDADNEKVCSGMITL 186

Query: 333 LDL 335
            DL
Sbjct: 187 DDL 189



 Score = 51.8 bits (123), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 24/139 (17%), Positives = 45/139 (32%), Gaps = 28/139 (20%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLK--GIITEGDI---------- 272
                 P V     +   + I++E     V V D   +    G+IT  D+          
Sbjct: 140 MMSGKPPTVSRLHTINSVLDIMAENNTDRVVVTDADNEKVCSGMITLDDLGFVEINPRGG 199

Query: 273 --------------FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLM 318
                          R           EDVM      +   T+   A +++ + +  +L 
Sbjct: 200 KEFKESRRVQPGGPRRYRAYVELPTVAEDVMNSPVIAVQRKTMAEDAAKIMVEKDFDMLP 259

Query: 319 VVDDCQKAIGIVHFLDLLR 337
           V+DD    +G  +  ++L+
Sbjct: 260 VIDD--VLVGQFNMENILK 276



 Score = 43.3 bits (101), Expect = 0.054,   Method: Composition-based stats.
 Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 1/53 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
            SVE++M      +     +  A  L+ ++ +S L VVD+  +  GIV   DL
Sbjct: 2   TSVEEIMSAPVFAVSARDNMARARNLMLRNGVSRLAVVDE-GRLRGIVSRKDL 53


>gi|15618206|ref|NP_224491.1| Mg2+ transporter [Chlamydophila pneumoniae CWL029]
 gi|15835821|ref|NP_300345.1| Mg++ transporter [Chlamydophila pneumoniae J138]
 gi|16752752|ref|NP_445020.1| magnesium transporter [Chlamydophila pneumoniae AR39]
 gi|33241629|ref|NP_876570.1| MgtE [Chlamydophila pneumoniae TW-183]
 gi|4376560|gb|AAD18435.1| Mg++ Transporter (CBS Domain) [Chlamydophila pneumoniae CWL029]
 gi|8163440|gb|AAF73674.1| magnesium transporter [Chlamydophila pneumoniae AR39]
 gi|8978660|dbj|BAA98496.1| Mg++ transporter [Chlamydophila pneumoniae J138]
 gi|33236138|gb|AAP98227.1| MgtE [Chlamydophila pneumoniae TW-183]
 gi|269303161|gb|ACZ33261.1| magnesium transporter [Chlamydophila pneumoniae LPCoLN]
          Length = 470

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 156 METTVKDVSACIRSNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEMSLKQIMN 211

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D      + L+ ++ I+ L VVD+    IG + + D++  
Sbjct: 212 QIEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEA 259



 Score = 40.3 bits (93), Expect = 0.46,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V       + + ++   +   + VVDE   L G IT  D+      D+   ++
Sbjct: 210 MNQIEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEAIE-DIADETI 268

Query: 286 EDVM 289
             + 
Sbjct: 269 ARMA 272


>gi|292900999|ref|YP_003540368.1| phosphosugar-binding RpiR family transcrptional regulator [Erwinia
           amylovora ATCC 49946]
 gi|291200847|emb|CBJ47981.1| putative phosphosugar-binding RpiR-family transcrptional regulator
           [Erwinia amylovora ATCC 49946]
          Length = 283

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQVSPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFAEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|288555750|ref|YP_003427685.1| hypothetical protein BpOF4_13710 [Bacillus pseudofirmus OF4]
 gi|288546910|gb|ADC50793.1| hypothetical protein BpOF4_13710 [Bacillus pseudofirmus OF4]
          Length = 218

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 31/123 (25%), Positives = 51/123 (41%), Gaps = 4/123 (3%)

Query: 204 FYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
           FY    G +L    V    V H      +V+    + DAI  +  +  G + V D+   L
Sbjct: 65  FYTGKTGTELLGEKVKNITVRHYQSRPIVVQESSSVYDAICTMFLEDVGTLFVTDKQTTL 124

Query: 264 KGIITEGDIFRN--FHKDLNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMV 319
            G+++  D+ R     + L ++ V  +M + P   V  ED L+    + L    I  L +
Sbjct: 125 VGVLSRKDLLRASLGKQALESIPVSIIMTRMPNITVCKEDDLIIEVAKKLINKQIDGLPI 184

Query: 320 VDD 322
           V D
Sbjct: 185 VQD 187



 Score = 39.9 bits (92), Expect = 0.59,   Method: Composition-based stats.
 Identities = 13/63 (20%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
             + +  ++V     + P V+ E + +  A+  +   ++  L V D     +G++   DL
Sbjct: 75  LGEKVKNITVRHYQSR-PIVVQESSSVYDAICTMFLEDVGTLFVTDKQTTLVGVLSRKDL 133

Query: 336 LRF 338
           LR 
Sbjct: 134 LRA 136


>gi|242398151|ref|YP_002993575.1| inosine-5'-monophosphate dehydrogenase related [Thermococcus
           sibiricus MM 739]
 gi|242264544|gb|ACS89226.1| inosine-5'-monophosphate dehydrogenase related [Thermococcus
           sibiricus MM 739]
          Length = 139

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI-FRNFHKDL-NTLSVEDVMI 290
           VK    + +A  ++ E   G + VVD G  +    T+ DI  R     L     V ++M 
Sbjct: 22  VKPDDTIQEACRVMVEFDIGSLVVVDNGNVVG-FFTKSDIIRRVIVPGLAYNTPVAEIMS 80

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           K    +  +  L   ++++    I  +++ ++  K +GI    DLL  
Sbjct: 81  KELITVNANVPLKKVLEIMAAKRIKHMLI-EEEGKVVGIFTLSDLLEA 127



 Score = 37.6 bits (86), Expect = 3.0,   Method: Composition-based stats.
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 1/58 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTL 283
               +  V    PL   + I++ KR   + + +E  K+ GI T  D+     + L T 
Sbjct: 79  MSKELITVNANVPLKKVLEIMAAKRIKHMLI-EEEGKVVGIFTLSDLLEASRRKLETA 135


>gi|330507962|ref|YP_004384390.1| CBS domain-containing membrane protein [Methanosaeta concilii GP-6]
 gi|328928770|gb|AEB68572.1| CBS domain containing membrane protein [Methanosaeta concilii GP-6]
          Length = 259

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 14/116 (12%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--KDLNTLS------- 284
                L+ A   + ++  G + VV E  +L GI+TEGD+ +     +DLN  +       
Sbjct: 138 NPNDRLVHARRTILDRDVGRLPVV-EAGRLVGILTEGDVAKALRAFRDLNDTASKQHTRI 196

Query: 285 ----VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
               V DVM  + K +  DT L     ++   NI  L V++  ++  G++    +L
Sbjct: 197 YNILVSDVMTHDVKYVYTDTPLEEVKSIILSDNIGGLPVLNHREEVAGMITRRSIL 252



 Score = 46.8 bits (110), Expect = 0.005,   Method: Composition-based stats.
 Identities = 24/128 (18%), Positives = 49/128 (38%), Gaps = 8/128 (6%)

Query: 211 GKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEG 270
             LG           + DS+  V     ++DA+ +L +     V V  +G+K+ G +   
Sbjct: 59  KSLGMPASSLHVASATQDSVIKVLADMDMLDAMLLLQKT---SVLVAVDGEKILGWVRP- 114

Query: 271 DIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIV 330
                  K   +    + M + P     +  L  A + +   ++  L VV +  + +GI+
Sbjct: 115 --REILEKANVSGLASEAM-RYPLTANPNDRLVHARRTILDRDVGRLPVV-EAGRLVGIL 170

Query: 331 HFLDLLRF 338
              D+ + 
Sbjct: 171 TEGDVAKA 178



 Score = 46.4 bits (109), Expect = 0.006,   Method: Composition-based stats.
 Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           + V+D+M + P  I +   L  A+ ++ ++++  L+V +   K  GI+    + R
Sbjct: 1   MQVKDIMTE-PVTIDKSERLGHALDIMEKNDLRRLLVTNK-GKIGGIITTRQIAR 53



 Score = 36.0 bits (82), Expect = 7.7,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 45/113 (39%), Gaps = 10/113 (8%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------FRN 275
            V         +     L  A+ I+ +     + V ++  K+ GIIT   I       ++
Sbjct: 2   QVKDIMTEPVTIDKSERLGHALDIMEKNDLRRLLVTNK-GKIGGIITTRQIARVLGARKS 60

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                ++L V      +   +L D  +  AM LL++   + ++V  D +K +G
Sbjct: 61  LGMPASSLHVASATQDSVIKVLADMDMLDAMLLLQK---TSVLVAVDGEKILG 110


>gi|300718211|ref|YP_003743014.1| transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
 gi|299064047|emb|CAX61167.1| Transcriptional regulator, RpiR family [Erwinia billingiae Eb661]
          Length = 242

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 28/122 (22%), Positives = 52/122 (42%), Gaps = 5/122 (4%)

Query: 46  QGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEAS-HG 104
             E       AV+ +   + R++  G G SG +G   A   ++ G  S ++       + 
Sbjct: 94  NEEFESLIDQAVKHLVRAE-RIIFVGAGTSGTLGKYGARFFSNVGKFSNYIDDPYYPVNS 152

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
           D+    +D + I+LS SG + E+  +          +I+IT+ + S +A  AD  L+   
Sbjct: 153 DM---YKDAVAIILSVSGETPEILRLASQFSLHQCQVISITNNDNSSLAKMADFNLSYHM 209

Query: 165 EP 166
             
Sbjct: 210 PQ 211


>gi|297560081|ref|YP_003679055.1| hypothetical protein Ndas_1108 [Nocardiopsis dassonvillei subsp.
           dassonvillei DSM 43111]
 gi|296844529|gb|ADH66549.1| CBS domain containing membrane protein [Nocardiopsis dassonvillei
           subsp. dassonvillei DSM 43111]
          Length = 221

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 22/120 (18%), Positives = 41/120 (34%), Gaps = 19/120 (15%)

Query: 236 GCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI------------------FRNFH 277
                +    + +     V VVD G ++ G+++  D+                       
Sbjct: 19  DAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLLLKLADPDPEEGYTGEPFRERLA 78

Query: 278 K-DLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +      +  ++M      +   T    A  L+R+H    L VVD   + +G+V   DLL
Sbjct: 79  RIKSTGTTARELMTSPAVTVTAATAPREAAGLMRRHGFRRLPVVDGDGRLVGLVGRSDLL 138



 Score = 51.1 bits (121), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 282 TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           T +V D+M  +     +D         +R H++S + VVD   + +G+V   DLL
Sbjct: 2   TKTVGDLMTTSVLAARDDAGYKELAAFMRDHHVSAVPVVDGGHRVLGVVSTADLL 56


>gi|191636890|ref|YP_001986056.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|301065200|ref|YP_003787223.1| proline/glycine betaine ABC transporter ATPase [Lactobacillus casei
           str. Zhang]
 gi|190711192|emb|CAQ65198.1| Glycine betaine/carnitine/choline ABC transporter, ATP-binding
           protein [Lactobacillus casei BL23]
 gi|300437607|gb|ADK17373.1| ABC-type proline/glycine betaine transport system, ATPase component
           [Lactobacillus casei str. Zhang]
 gi|327380921|gb|AEA52397.1| Putative ABC transporter ATP/GTP-binding protein [Lactobacillus
           casei LC2W]
 gi|327384093|gb|AEA55567.1| Putative ABC transporter ATP/GTP-binding protein [Lactobacillus
           casei BD-II]
          Length = 417

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/99 (25%), Positives = 48/99 (48%), Gaps = 3/99 (3%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +  G  L +AI ++ ++R   + V D+   LKG I   D+     +  +  SV D++  +
Sbjct: 268 ITPGKSLAEAILLMRKRRVDTLLVTDDENHLKGFI---DLESLETRYQSATSVGDIIKTS 324

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVH 331
              + +D+LL      + +  +  + VVD  +K +GIV 
Sbjct: 325 IFYVNKDSLLRDTADRILKRGLKYVPVVDHDKKLVGIVT 363



 Score = 59.1 bits (142), Expect = 9e-07,   Method: Composition-based stats.
 Identities = 17/59 (28%), Positives = 27/59 (45%)

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
           R      +  +VE +M+KNP  I     L  A+ L+R+  +  L+V DD     G +  
Sbjct: 246 RLVQARADVTTVEQIMLKNPAAITPGKSLAEAILLMRKRRVDTLLVTDDENHLKGFIDL 304


>gi|153854298|ref|ZP_01995597.1| hypothetical protein DORLON_01592 [Dorea longicatena DSM 13814]
 gi|149753073|gb|EDM63004.1| hypothetical protein DORLON_01592 [Dorea longicatena DSM 13814]
          Length = 259

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 25/134 (18%), Positives = 50/134 (37%), Gaps = 9/134 (6%)

Query: 38  LSSLESSLQGELSFQFHCAVE---KIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
           L++++   +   +  F   ++   K+      ++  G+G S  IG   A    + G  SF
Sbjct: 82  LTAVKDFFERVQTQAFAENIQEAVKLLTKASSIIFVGVGNSSFIGKYGARYFNNVGWFSF 141

Query: 95  FVHA--AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVV 152
            +         G           I LS SG +++   +    +R    LI+IT++    +
Sbjct: 142 AIDDPFTPVFRGK----GERTATIALSVSGETEQTLMLAEKLKRRGSSLISITNKANCSL 197

Query: 153 ACHADIVLTLPKEP 166
           A  +D  +      
Sbjct: 198 AKMSDCNINYYVSE 211


>gi|120437441|ref|YP_863127.1| CBS domain-containing protein [Gramella forsetii KT0803]
 gi|117579591|emb|CAL68060.1| protein containing CBS domains [Gramella forsetii KT0803]
          Length = 155

 Score = 63.8 bits (154), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 23/113 (20%), Positives = 49/113 (43%), Gaps = 7/113 (6%)

Query: 234 KIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF------RNFHKDLNTLSVED 287
           +    ++D +  L +       VV+E  +L G+I+EGD        R ++  ++ L+V  
Sbjct: 35  RENENIMDVMEKLIKHGISGGCVVNEKMELLGMISEGDCMKEISDSRYYNMPMSDLTVGK 94

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
            MIK  + I  +  +  A +   +       +V +  + +G +   D+L   +
Sbjct: 95  RMIKKVETIDGNMNVLEAARKFTELKFRRFPIV-ENGRLVGQISQRDVLNAAL 146



 Score = 43.7 bits (102), Expect = 0.044,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 28/55 (50%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           SV+D M  N     E+  +   M+ L +H IS   VV++  + +G++   D ++ 
Sbjct: 22  SVKDYMTVNLVTFRENENIMDVMEKLIKHGISGGCVVNEKMELLGMISEGDCMKE 76


>gi|323479597|gb|ADX79036.1| helix-turn-helix domain, RpiR family protein [Enterococcus faecalis
           62]
          Length = 283

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 38/161 (23%), Positives = 62/161 (38%), Gaps = 11/161 (6%)

Query: 39  SSLESSLQGELSFQF--------HCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTG 90
             +ES L   +   F          A+  +K  + ++ + GIG S      L       G
Sbjct: 98  MKVESLLNATIEDLFYTVDKQALERAIAHVKKAE-KIHLVGIGASSLTTYNLYHKFNRAG 156

Query: 91  TPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKS 150
             + F + +      L   T  D++I +S+SG + E       A+     +I ITS +  
Sbjct: 157 RQAIFNYDSHMMLEFLNYATAQDILITVSYSGLTKEALIACEIAKNRGATVIFITSNDGE 216

Query: 151 VVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAI 191
            V   +D VL +P        G    +S    +AIGD L +
Sbjct: 217 NVRSLSDEVLLVPNNEHLIRVGAI--SSITSSMAIGDVLYL 255


>gi|320582674|gb|EFW96891.1| inosine-5'-monophosphate dehydrogenase IMD2 [Pichia angusta DL-1]
          Length = 523

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/170 (17%), Positives = 59/170 (34%), Gaps = 11/170 (6%)

Query: 173 LAPTTSAIMQLAIGDALAI--ALLESRNFSENDFYVLHPGGKLGTLFVCASDVMHSGDSI 230
             P  S+ M       +AI  ALL       ++         +  +    +  ++   + 
Sbjct: 69  KTPFVSSPMDTVTESNMAIHMALLGGIGIIHHNCTAEEQAEMVRKVKKYENGFINDPVA- 127

Query: 231 PLVKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNFHKDLNTLSVED 287
             +     +     +  +  F    V + G    KL GIIT  D+   FH++ +   V +
Sbjct: 128 --ISPSTTVETVKAMGQQFGFTSFPVTETGKVGGKLVGIITSRDV--QFHEN-DASPVSE 182

Query: 288 VMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +M  +         L     +LR+     L +VD     + ++   DL +
Sbjct: 183 IMTTDLITAKAGISLAEGNDILRKSKKGKLPIVDSEGNLVSMLSRTDLQK 232


>gi|329942847|ref|ZP_08291626.1| magnesium transporter [Chlamydophila psittaci Cal10]
 gi|332287440|ref|YP_004422341.1| magnesium transporter [Chlamydophila psittaci 6BC]
 gi|313848020|emb|CBY17017.1| putative magnesium transporter [Chlamydophila psittaci RD1]
 gi|325506806|gb|ADZ18444.1| magnesium transporter [Chlamydophila psittaci 6BC]
 gi|328815107|gb|EGF85096.1| magnesium transporter [Chlamydophila psittaci Cal10]
          Length = 470

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 156 METTVKDVSACIRNNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEISLKQIMS 211

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D      + L+ ++ I+ L VVD+    IG + + D++  
Sbjct: 212 QVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEA 259



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V       + + ++   +   + VVDE   L G IT  D+      D+   ++
Sbjct: 210 MSQVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEAIE-DIADETI 268

Query: 286 EDVM 289
             + 
Sbjct: 269 ARMA 272


>gi|313884625|ref|ZP_07818383.1| transcriptional repressor CcpN [Eremococcus coleocola
           ACS-139-V-Col8]
 gi|312620135|gb|EFR31566.1| transcriptional repressor CcpN [Eremococcus coleocola
           ACS-139-V-Col8]
          Length = 205

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/169 (20%), Positives = 68/169 (40%), Gaps = 29/169 (17%)

Query: 186 GDALAIALLESRNFSENDFYV---------------------LHPGGKLGTLFVCASDVM 224
           GD +A  L  SR+   +DF +                       P        +  +++M
Sbjct: 22  GDTIAQLLGLSRSTLRSDFAILTMTGILDARPKIGYFYSGLDFQPLFLDKLNHMTVAEIM 81

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN-FHKDLNTL 283
                  ++K    +  AI+ L     G + VVD+ ++L G+++  D+ R   +K   ++
Sbjct: 82  IP---AIIIKQDTSVQMAISHLFLHDAGSLYVVDDNEELVGLVSRKDLLRTVLNKSDVSV 138

Query: 284 SVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKAIG 328
            +  +M +  N  V   +  +  A Q+LR   I  L V+  D  ++ +G
Sbjct: 139 PIAVMMTRWPNIHVTYPNRPVLEAGQMLRDFEIDSLPVLKSDQSKQVVG 187



 Score = 48.0 bits (113), Expect = 0.002,   Method: Composition-based stats.
 Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)

Query: 251 FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLR 310
                ++D   K+    +  D    F   LN ++V ++MI    +I +DT + +A+  L 
Sbjct: 43  LTMTGILDARPKIGYFYSGLDFQPLFLDKLNHMTVAEIMIPA-IIIKQDTSVQMAISHLF 101

Query: 311 QHNISVLMVVDDCQKAIGIVHFLDLLR 337
            H+   L VVDD ++ +G+V   DLLR
Sbjct: 102 LHDAGSLYVVDDNEELVGLVSRKDLLR 128


>gi|153829391|ref|ZP_01982058.1| conserved hypothetical protein [Vibrio cholerae 623-39]
 gi|148875111|gb|EDL73246.1| conserved hypothetical protein [Vibrio cholerae 623-39]
          Length = 169

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/128 (17%), Positives = 41/128 (32%), Gaps = 11/128 (8%)

Query: 214 GTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF 273
                              +     L DA  ++       V +VD  +KL GI+++ D+ 
Sbjct: 16  RKELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLLGIVSQRDLL 75

Query: 274 RNFHKDL----------NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDC 323
                 L              + +VM  +   +     L  +   +++H I  L VV   
Sbjct: 76  AAQESSLQRSAQGDSLAFETPLFEVMHTDVASVAPQAGLKESAIYMQKHKIGCLPVVAKD 135

Query: 324 QKAIGIVH 331
              +GI+ 
Sbjct: 136 -VLVGIIT 142



 Score = 63.4 bits (153), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 3/71 (4%)

Query: 268 TEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
           ++  + R   K+L  + VED+M ++P  +L    L  A  L+   +I  + +VD  +K +
Sbjct: 10  SDDSLRR---KELAMIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDANKKLL 66

Query: 328 GIVHFLDLLRF 338
           GIV   DLL  
Sbjct: 67  GIVSQRDLLAA 77



 Score = 36.0 bits (82), Expect = 8.1,   Method: Composition-based stats.
 Identities = 12/46 (26%), Positives = 21/46 (45%), Gaps = 1/46 (2%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGD 271
               +  V     L ++   + + + GC+ VV +   L GIIT+ D
Sbjct: 101 MHTDVASVAPQAGLKESAIYMQKHKIGCLPVVAKD-VLVGIITDSD 145


>gi|124514509|gb|EAY56022.1| putative Cl-channel, voltage gated [Leptospirillum rubarum]
          Length = 570

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/86 (26%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 254 VAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHN 313
             V+DE + L GII+  DI R   ++   L V DVM+     +  +  +  A+Q + +++
Sbjct: 477 YPVLDEQKALVGIISVYDIDRIPEEEWRKLKVSDVMVTPVITVTREETIQDAVQKMNRYD 536

Query: 314 ISVLMVV--DDCQKAIGIVHFLDLLR 337
           +  L VV   D ++ IG +    + +
Sbjct: 537 LDFLPVVSEKDPKELIGGITRTGIFQ 562


>gi|328914688|gb|AEB55521.1| magnesium transporter [Chlamydophila psittaci 6BC]
          Length = 491

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 177 METTVKDVSACIRNNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEISLKQIMS 232

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D      + L+ ++ I+ L VVD+    IG + + D++  
Sbjct: 233 QVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEA 280



 Score = 40.3 bits (93), Expect = 0.44,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V       + + ++   +   + VVDE   L G IT  D+      D+   ++
Sbjct: 231 MSQVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEAIE-DIADETI 289

Query: 286 EDVM 289
             + 
Sbjct: 290 ARMA 293


>gi|319938379|ref|ZP_08012774.1| hypothetical protein HMPREF9488_03610 [Coprobacillus sp. 29_1]
 gi|319806467|gb|EFW03131.1| hypothetical protein HMPREF9488_03610 [Coprobacillus sp. 29_1]
          Length = 222

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/146 (18%), Positives = 51/146 (34%), Gaps = 3/146 (2%)

Query: 45  LQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHG 104
           LQ + +         I     R+++ G+G S  I   +   L   G  +  V   E    
Sbjct: 78  LQSKYNEYHEQFSYIIHDKSKRIIVFGLGFSAPIAEYMQQRLTLLGYQALCVVHMEMF-- 135

Query: 105 DLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPK 164
                  D ++IV+S+SG +  L  I+  A    +P+I+      S +  ++ + L +  
Sbjct: 136 -SQWFNDDTILIVISYSGKTPRLNEIVETAASNHVPIISFLGNQDSSIFKYSTLPLIIGN 194

Query: 165 EPESCPHGLAPTTSAIMQLAIGDALA 190
                       T     +   + L 
Sbjct: 195 YDSFSHDLNQANTFFGETIIAFETLV 220


>gi|299149113|ref|ZP_07042174.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Bacteroides sp. 3_1_23]
 gi|298512780|gb|EFI36668.1| glutamine-fructose-6-phosphate transaminase (isomerizing)
           [Bacteroides sp. 3_1_23]
          Length = 614

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/174 (21%), Positives = 69/174 (39%), Gaps = 14/174 (8%)

Query: 41  LESSLQGELSFQFHCAV----EKIKAIKGRVVITGIGKSGH---IGSKLASTLASTGTPS 93
           +   +  E       AV    EK+   K R +I   G S H   IG  L  +      P 
Sbjct: 272 MRGRINVEADNVVLSAVIDHREKLLNAK-RFIIVACGTSWHAGLIGKHLIESFCR--IPV 328

Query: 94  FFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
              +A+E  + D  +I   D++I +S SG + +  A +  A+     +  I +   S + 
Sbjct: 329 EVEYASEFRYRD-PVIDGQDVVIAISQSGETADTLAAVELAKSRGAFIYGICNAIGSSIP 387

Query: 154 CHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVL 207
                   +   PE    G+A T +   Q+ +   LA+ L +++   +  +++ 
Sbjct: 388 RATHTGSYIHVGPE---IGVASTKAFTGQVTVLAMLALTLAKAKGTIDEQYFLS 438


>gi|251779697|ref|ZP_04822617.1| nucleotidyl transferase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
 gi|243084012|gb|EES49902.1| nucleotidyl transferase [Clostridium botulinum E1 str. 'BoNT E
           Beluga']
          Length = 347

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 19/76 (25%), Positives = 46/76 (60%), Gaps = 2/76 (2%)

Query: 263 LKGIITEGDIFRNFHKDLN-TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVD 321
           L G++T+GDI R   K+ + + S++++M K+PK +LE        ++++Q  I  + +V+
Sbjct: 37  LIGVVTDGDIRRWILKNGDISKSIDNIMNKSPKYLLETER-DNVKEIMKQFKIEAVPIVN 95

Query: 322 DCQKAIGIVHFLDLLR 337
           +  + + ++ + D+ +
Sbjct: 96  EEIEVVDVIFWNDVYQ 111


>gi|224476672|ref|YP_002634278.1| CBS domain-containing protein [Staphylococcus carnosus subsp.
           carnosus TM300]
 gi|222421279|emb|CAL28093.1| truncated CBS domain protein [Staphylococcus carnosus subsp.
           carnosus TM300]
          Length = 163

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/117 (20%), Positives = 53/117 (45%), Gaps = 8/117 (6%)

Query: 230 IPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKDLNTLSVED 287
             ++K    + +AI  +  +    + VV++     G+ +  D+ R     +D++T+ +  
Sbjct: 40  PIILKSDMSVYEAICTIFLEDVSTLFVVNQNNDFIGVCSRKDLLRASMIGEDIHTMPISV 99

Query: 288 VMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVV--DDCQKA--IGIVHFLDLLRF 338
           +M + P    + E+ LL +A QL+ +  I  + +V   D  K   IG +    + + 
Sbjct: 100 IMTRMPNLTYVKENDLLVLAAQLMIEKEIDSIPIVRGKDNGKLEAIGRISKTTITKL 156


>gi|195402051|ref|XP_002059623.1| GJ14720 [Drosophila virilis]
 gi|194147330|gb|EDW63045.1| GJ14720 [Drosophila virilis]
          Length = 556

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/183 (16%), Positives = 57/183 (31%), Gaps = 8/183 (4%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVC 219
           + L           AP  S+ M       +AIA+           +              
Sbjct: 90  VDLSSPLTKGITLRAPLVSSPMDTVTESEMAIAMALCGGIGI--IHHNCTPEYQALEVHK 147

Query: 220 ASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRN 275
                H     P V      + D +    +  F    V + G    KL G++T  DI  +
Sbjct: 148 VKKYKHGFMRDPSVMSPSNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVTSRDI--D 205

Query: 276 FHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDL 335
           F +    + + D+M            L +A  +L +     L +V+   + + ++   DL
Sbjct: 206 FREHQPEVLLADIMTTELITAPNGITLPMANAILEKSKKGKLPIVNQDGELVAMIARTDL 265

Query: 336 LRF 338
            + 
Sbjct: 266 KKA 268


>gi|62185111|ref|YP_219896.1| putative magnesium transporter [Chlamydophila abortus S26/3]
 gi|62148178|emb|CAH63935.1| putative magnesium transporter [Chlamydophila abortus S26/3]
          Length = 470

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 235 IGCPLIDAITILSEKR----FGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMI 290
           +   + D    +           V V+D   +L+G++T+    R+   +   +S++ +M 
Sbjct: 156 METTVKDVSACIRNNPGIDLTRLVFVLDFKGELQGVVTD----RSLIINPPEISLKQIMS 211

Query: 291 KNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           +    +L D      + L+ ++ I+ L VVD+    IG + + D++  
Sbjct: 212 QVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEA 259



 Score = 40.3 bits (93), Expect = 0.45,   Method: Composition-based stats.
 Identities = 11/64 (17%), Positives = 22/64 (34%), Gaps = 1/64 (1%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSV 285
                  V       + + ++   +   + VVDE   L G IT  D+      D+   ++
Sbjct: 210 MSQVEHKVLPDATREEVVDLVERYKIAALPVVDEENFLIGAITYEDVVEAIE-DIADETI 268

Query: 286 EDVM 289
             + 
Sbjct: 269 ARMA 272


>gi|90021357|ref|YP_527184.1| CBS domain-containing protein [Saccharophagus degradans 2-40]
 gi|89950957|gb|ABD80972.1| CBS domain protein [Saccharophagus degradans 2-40]
          Length = 131

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/118 (19%), Positives = 48/118 (40%), Gaps = 5/118 (4%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN--- 281
           +   +   +     + +AI +L  +      V+D+ + L G I+E D  R    D     
Sbjct: 9   YMDRNPHAINQLASVREAIGVLVNEGITGAPVIDDSKTLVGFISEHDCIRQLLNDAFYYD 68

Query: 282 -TLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            + ++  +M  + K +  DT +    + +         VVD+  K +G++    +LR 
Sbjct: 69  ESAAIGAIMRTDLKSVTPDTSILTIAEAMANGPPKNYPVVDN-GKLVGLISRAHVLRA 125



 Score = 49.1 bits (116), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 30/58 (51%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++++ V D M +NP  I +   +  A+ +L    I+   V+DD +  +G +   D +R
Sbjct: 1   MHSILVRDYMDRNPHAINQLASVREAIGVLVNEGITGAPVIDDSKTLVGFISEHDCIR 58


>gi|315648841|ref|ZP_07901936.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus vortex V453]
 gi|315275809|gb|EFU39161.1| putative signal transduction protein with CBS and DRTGG domains
           [Paenibacillus vortex V453]
          Length = 444

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/126 (20%), Positives = 47/126 (37%), Gaps = 4/126 (3%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
           +    +   D+ H       +K    + +   I+ E       V DE  ++ GI+   D+
Sbjct: 190 IKKKIMLVEDIAHDKPKNHQLKNSVTVQEFKRIIQETGEIRYPVTDEWNRVIGIVGVRDV 249

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
                    +  +E  M +NP      T L  A Q++    I  L +VD  +K +  V  
Sbjct: 250 ----EGLAESQPIEKAMTRNPVTASLKTSLASAAQIMMWEGIDFLPIVDRNRKLLATVTR 305

Query: 333 LDLLRF 338
            ++L  
Sbjct: 306 KEVLGA 311


>gi|302654632|ref|XP_003019118.1| hypothetical protein TRV_06857 [Trichophyton verrucosum HKI 0517]
 gi|291182819|gb|EFE38473.1| hypothetical protein TRV_06857 [Trichophyton verrucosum HKI 0517]
          Length = 573

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 33/183 (18%), Positives = 58/183 (31%), Gaps = 26/183 (14%)

Query: 173 LAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGD 228
             P  S+ M      ++AI +            V+H              V         
Sbjct: 100 NVPLLSSPMDTVTEHSMAIHMALLGGLG-----VIHHNCSAEEQAEMVRKVKRYENGFIL 154

Query: 229 SIPLVKIGCPLIDAITILSEKRFGCVAVVDE--------------GQKLKGIITEGDIFR 274
              ++     + +   +  +  FG   V  +                 L GI+T  DI  
Sbjct: 155 DPVVISPKTTVAEVKELKQKWGFGGFPVTGKLYIYVLFVFYQTPSNDVLVGIVTSRDI-- 212

Query: 275 NFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            FH +L+   V  VM  +       T L  A ++LR      L +VD+    + ++   D
Sbjct: 213 QFHPELSD-PVTAVMTTDLVTAPSGTTLAEANEVLRASKKGKLPIVDEAGNIVSLLSRSD 271

Query: 335 LLR 337
           L++
Sbjct: 272 LMK 274


>gi|271968403|ref|YP_003342599.1| IMP dehydrogenase [Streptosporangium roseum DSM 43021]
 gi|270511578|gb|ACZ89856.1| IMP dehydrogenase [Streptosporangium roseum DSM 43021]
          Length = 479

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/181 (16%), Positives = 57/181 (31%), Gaps = 10/181 (5%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS--ENDFYVLHPGGKLGTLF 217
           L +            P   A M    G  +A  +      +    D     P   +  + 
Sbjct: 31  LAVDLSTNDGTGTTIPLVVANMTAVAGRRMAETVARRGGIAVIPQDI----PIDVVSNVV 86

Query: 218 VCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH 277
                     D+   +     + +A+ +L ++  G + +VD   +  G++TEGD      
Sbjct: 87  SWVKARDLVHDTPLTLTPHDTVGEALNLLPKRAHGAIIIVDWENRPIGVVTEGDC----G 142

Query: 278 KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
                  +  VM  +   +        A   L      +  +VDD  + +GI+     LR
Sbjct: 143 GVDMYTQLSQVMSDHLLTLPAGLDPREAFDRLHGGRHRLAPIVDDDGRLVGILTRTGALR 202

Query: 338 F 338
            
Sbjct: 203 A 203


>gi|50413518|ref|XP_457275.1| DEHA2B07282p [Debaryomyces hansenii CBS767]
 gi|49652940|emb|CAG85276.1| DEHA2B07282p [Debaryomyces hansenii]
          Length = 339

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 9/120 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT--- 282
           +   I    +  P+ID I +L++K    V +VDE  KL  +    D+       +     
Sbjct: 212 TLKDIATCTMDTPVIDVIHLLTQKSVSSVPIVDEQGKLINVYEAVDVLGLVKGGIYNDLV 271

Query: 283 LSVEDVMIKNP------KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           LSV D +++ P           +  L+  M  +R+  +  L VV+D  K + ++   D+L
Sbjct: 272 LSVGDALLRRPEDFEGVHTCTLNDRLSTIMDTIRKSRLHRLFVVNDEGKLVSVITLSDIL 331



 Score = 38.7 bits (89), Expect = 1.4,   Method: Composition-based stats.
 Identities = 19/113 (16%), Positives = 42/113 (37%), Gaps = 22/113 (19%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKDLNTLSVED 287
           +     L +A   + + +   + ++DE +K     +  ++T+  I +    +        
Sbjct: 142 IHPFKSLYEACVKMIDSKARRIPLIDEDEKTHREIVVSVLTQYRILKFVALNCKETK--- 198

Query: 288 VMIKNPK-------------VILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
            M+  P                  DT +   + LL Q ++S + +VD+  K I
Sbjct: 199 -MLLKPIKNLQGLGTLKDIATCTMDTPVIDVIHLLTQKSVSSVPIVDEQGKLI 250


>gi|325661652|ref|ZP_08150276.1| hypothetical protein HMPREF0490_01010 [Lachnospiraceae bacterium
           4_1_37FAA]
 gi|325472179|gb|EGC75393.1| hypothetical protein HMPREF0490_01010 [Lachnospiraceae bacterium
           4_1_37FAA]
          Length = 152

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/121 (21%), Positives = 46/121 (38%), Gaps = 12/121 (9%)

Query: 225 HSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF--HKDLNT 282
                +  V     L   +  +   ++  V V++   K  G ITEGD+      H +L+ 
Sbjct: 8   RPKSDLAYVYDNHTLRQVLETMEHHKYSSVPVLNREGKYVGSITEGDLLWWIKDHANLDL 67

Query: 283 LSVEDV-MIKNPKVILEDTLLTVAMQLLRQHNI------SVLMVVDDCQKAIGIVHFLDL 335
              E++ M +       D     A   +    I      + + VVDD Q  IGI+   ++
Sbjct: 68  KKAENILMTE--VTRRYDYQAVNAGAKMEDL-IDRAMEQNFVPVVDDQQNFIGIITRREI 124

Query: 336 L 336
           +
Sbjct: 125 I 125


>gi|313122420|ref|YP_004038307.1| glutamine--fructose-6-phosphate transaminase [Halogeometricum
           borinquense DSM 11551]
 gi|312296764|gb|ADQ69360.1| glutamine--fructose-6-phosphate transaminase [Halogeometricum
           borinquense DSM 11551]
          Length = 605

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 29/127 (22%), Positives = 52/127 (40%), Gaps = 12/127 (9%)

Query: 67  VVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGMITR----DDLIIVLSWSG 122
           V   G+G S H     +S L+S G P++   A E      G++        L+I ++ SG
Sbjct: 295 VQFVGMGTSYHAAMYASSMLSSRGVPAYAFQAGE-----YGLVCPPVTDGTLVIAVTQSG 349

Query: 123 SSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQ 182
            + +    +  A+      +A+T+   S +    +  L +   PE    G+A T +   Q
Sbjct: 350 ETADTLDAIRRAKSAGADTVAVTNTVGSSITRECEDTLLIRAGPE---IGVAATKTFCSQ 406

Query: 183 LAIGDAL 189
           +     L
Sbjct: 407 VTALSLL 413



 Score = 50.7 bits (120), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 31/155 (20%), Positives = 55/155 (35%), Gaps = 1/155 (0%)

Query: 36  RGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLAS-TGTPSF 94
             LS L   +Q  L      A+ +           G G +     + A      T   + 
Sbjct: 434 EALSRLPGHVQEILDTSVAPALAQEIEDSESYFFIGRGIAHSAALEGALKFKEITYEHAE 493

Query: 95  FVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVAC 154
              A+E  HG L ++T +  +  +      +   + +   +    P+IAITS+  S +A 
Sbjct: 494 GFAASELKHGPLALVTPNTPVFAIFTGFEDEATLSSMKEVQARGAPVIAITSKTDSEIAE 553

Query: 155 HADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDAL 189
            AD VL++P+               ++     D L
Sbjct: 554 FADYVLSIPETHPDVAGIPVSVQLQLVAYHAADLL 588


>gi|256379154|ref|YP_003102814.1| signal transduction protein with CBS domains [Actinosynnema mirum
           DSM 43827]
 gi|255923457|gb|ACU38968.1| putative signal transduction protein with CBS domains
           [Actinosynnema mirum DSM 43827]
          Length = 137

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/124 (21%), Positives = 55/124 (44%), Gaps = 7/124 (5%)

Query: 217 FVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF--- 273
              A ++MH+G     V+    L +A  ++ + + G + +     KLKGIIT+ DI    
Sbjct: 1   MTTAREIMHAGVMC--VQDNQTLEEAAVMMRDMKVGSLPICGSDDKLKGIITDRDIVISC 58

Query: 274 RNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFL 333
                    +    +  +N   +  DT +T  ++ +  + I  + V+ +  + +G+V   
Sbjct: 59  VAAGISPADMRAGQLA-RNLHWVDADTDITDVLETMEVNQIRRIPVL-ENHRLVGMVSES 116

Query: 334 DLLR 337
           DL +
Sbjct: 117 DLAK 120


>gi|195041927|ref|XP_001991340.1| GH12599 [Drosophila grimshawi]
 gi|193901098|gb|EDV99964.1| GH12599 [Drosophila grimshawi]
          Length = 543

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/190 (16%), Positives = 60/190 (31%), Gaps = 22/190 (11%)

Query: 160 LTLPKEPESCPHGLAPTTSAIMQLAIGDALAIAL-------LESRNFSENDFYVLHPGGK 212
           + L           AP  S+ M       +AIA+       +   N +     +      
Sbjct: 77  VDLSSPLTKGISLRAPLVSSPMDTVTESEMAIAMALCGGIGIIHHNCTPEYQAL------ 130

Query: 213 LGTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIIT 268
                       H     P V      + D +    +  F    V + G    KL G++T
Sbjct: 131 ---EVHKVKKYKHGFMRDPSVMSPSNTVGDVLEARRKNGFTGYPVTENGKLGGKLLGMVT 187

Query: 269 EGDIFRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
             DI  +F +    + + D+M            L +A  +L +     L +V+   + + 
Sbjct: 188 SRDI--DFREHQPEILLADIMTTQLITAPNGITLPMANAILEKSKKGKLPIVNQDGELVA 245

Query: 329 IVHFLDLLRF 338
           ++   DL + 
Sbjct: 246 MIARTDLKKA 255


>gi|227874192|ref|ZP_03992395.1| possible transcriptional regulator RpiR [Oribacterium sinus F0268]
 gi|227839980|gb|EEJ50407.1| possible transcriptional regulator RpiR [Oribacterium sinus F0268]
          Length = 314

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 2/150 (1%)

Query: 49  LSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHAAEASHGDLGM 108
           L F     V  +     R+V+ G+G+S      L S L   G P      A        +
Sbjct: 143 LDFDTMQTVADLIHEARRIVVIGVGRSKVTMEALYSRLYRIGYPIMMFSDAHEIVNITSI 202

Query: 109 ITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHADIVLTLPKEPES 168
           + + D++I +S  G S  +      A++  I ++ I+S  +S +A  +D  L    +  +
Sbjct: 203 MEKKDILICVSNFGQSKSVVEGARRAKKRGIQVVGISSIKESPLAKISDYTLFSAYDYNN 262

Query: 169 CPHGLA--PTTSAIMQLAIGDALAIALLES 196
              G    P++  + QL I D L + +   
Sbjct: 263 AQDGNLFDPSSENLAQLVIVDCLYMLVAHK 292


>gi|222107145|ref|YP_002547936.1| transcriptional regulator RpiR family [Agrobacterium vitis S4]
 gi|221738324|gb|ACM39220.1| transcriptional regulator RpiR family [Agrobacterium vitis S4]
          Length = 287

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/177 (20%), Positives = 64/177 (36%), Gaps = 6/177 (3%)

Query: 20  KNSTVQCALRSIIAEKRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIG 79
                  A   I   +  L  +  SL    +       ++I   +        G S  I 
Sbjct: 87  STEPQDVAEDVITKAQNALFMMHRSLD---AVMIEKVADRISRAEMIYAFGSGGNSSMIA 143

Query: 80  SKLASTLASTGTPSFFVHAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSI 139
           S+L + L   G+     +              +D+I+  S+SG + EL      AR   I
Sbjct: 144 SELQNRLFRLGSRVTACNDHHMQLMLTAAARSNDIIVGSSFSGRNLELARCFELARDNGI 203

Query: 140 PLIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLES 196
             IA+T ++ S VA  A++V+ +            PT++    LA+ D +A  +   
Sbjct: 204 TTIALT-QSDSAVAKAAELVVGIDLPEGDNIFR--PTSTRFAYLAMVDVIASLVAYR 257


>gi|222056023|ref|YP_002538385.1| hypothetical protein [Geobacter sp. FRC-32]
 gi|221565312|gb|ACM21284.1| CBS domain containing membrane protein [Geobacter sp. FRC-32]
          Length = 151

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 28/121 (23%)

Query: 244 TILSEKRFGCVAVVDEGQKLKGIITEGDIF------------------------RNFHKD 279
            + ++ R     VV+E   L GI+TE D+                         + F K+
Sbjct: 27  ELFTKHRVSSFPVVNENNHLVGIVTETDLIEQDKSLHIPTVISIFDWVLYLESDKKFEKE 86

Query: 280 LNTL---SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L  +   +V D+  ++   +   T L     ++ +  I  L VV + QK +G+V  +DL+
Sbjct: 87  LKKMTGQTVGDIFSEDVTSVNTSTPLNEVADIMSKRQIHALPVV-EGQKLVGVVSRIDLI 145

Query: 337 R 337
           R
Sbjct: 146 R 146



 Score = 45.3 bits (106), Expect = 0.014,   Method: Composition-based stats.
 Identities = 15/55 (27%), Positives = 27/55 (49%), Gaps = 1/55 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           L+  DVM K+  + +        + +L  +H +S   VV++    +GIV   DL+
Sbjct: 2   LTAADVMTKDNIITVTRETTVRTLAELFTKHRVSSFPVVNENNHLVGIVTETDLI 56



 Score = 37.2 bits (85), Expect = 3.6,   Method: Composition-based stats.
 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 1/44 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF 276
           V    PL +   I+S+++   + VV EGQKL G+++  D+ R+ 
Sbjct: 106 VNTSTPLNEVADIMSKRQIHALPVV-EGQKLVGVVSRIDLIRSM 148


>gi|220924971|ref|YP_002500273.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
 gi|219949578|gb|ACL59970.1| putative signal transduction protein with CBS domains
           [Methylobacterium nodulans ORS 2060]
          Length = 143

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/118 (22%), Positives = 51/118 (43%), Gaps = 4/118 (3%)

Query: 223 VMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD--- 279
           +   G ++  V+    L +A  +L+E+  G + V D G  + GII+E D+ R   +    
Sbjct: 7   LSQKGRTVVTVQPHRTLAEAAELLAERGIGALVVSDAGLTVLGIISERDMIRAIARGGSA 66

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           +    V   M          T +   M+L+       + VV++    +G+V   D+++
Sbjct: 67  VLEHPVSRYMTGRVITCTRSTAIEEVMELMTDGRFRHVPVVEE-GHLVGLVSIGDVVK 123


>gi|110816325|gb|ABG91826.1| FoxH [Sulfolobus metallicus DSM 6482]
          Length = 309

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/125 (20%), Positives = 45/125 (36%), Gaps = 9/125 (7%)

Query: 213 LGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDI 272
                +  S +         V     L +A   +S  + G + V +       I+TE D+
Sbjct: 54  NERARITVSRLKRHMKKPVFVDPSVTLRNAAAKMSTLKIGSLIVGNR------IVTETDL 107

Query: 273 FRNFHKDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHF 332
              +        VE  + KN   I     +  A+ L+ + +I  L V D+    +G+   
Sbjct: 108 LEGWLSRGEEKIVE--ISKNAITIDCRKTVDEALMLMSEKDIGHLPVTDNE-SIVGMFSL 164

Query: 333 LDLLR 337
            D LR
Sbjct: 165 RDALR 169



 Score = 54.9 bits (131), Expect = 2e-05,   Method: Composition-based stats.
 Identities = 24/130 (18%), Positives = 50/130 (38%), Gaps = 17/130 (13%)

Query: 221 SDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFH--- 277
             ++    +   +     + +A+ ++SEK  G + V D  + + G+ +  D  R      
Sbjct: 117 EKIVEISKNAITIDCRKTVDEALMLMSEKDIGHLPVTD-NESIVGMFSLRDALRTVSVTS 175

Query: 278 ---------KDLNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIG 328
                    K  ++ +V    I+ P  IL +     A + +R+     ++V D     IG
Sbjct: 176 FIKGDLRIIKADHSETVGKYAIRAP--ILNEANSVKAFRAMRKWRTKAILVEDKGN--IG 231

Query: 329 IVHFLDLLRF 338
           I+   D+   
Sbjct: 232 IITLRDITNA 241


>gi|312174160|emb|CBX82413.1| putative transcriptional regulator [Erwinia amylovora ATCC
           BAA-2158]
          Length = 283

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQVSPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFAEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|299535816|ref|ZP_07049137.1| YqzB [Lysinibacillus fusiformis ZC1]
 gi|298729016|gb|EFI69570.1| YqzB [Lysinibacillus fusiformis ZC1]
          Length = 210

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 28/124 (22%), Positives = 50/124 (40%), Gaps = 7/124 (5%)

Query: 222 DVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRN--FHKD 279
            V        +V     + DAI  +  +  G + VVD+ + L G+++  D+ R     +D
Sbjct: 79  KVKDFHSGPVVVPETMTVYDAICFMFSEDVGTLFVVDKNEFLTGVLSRKDLLRTSIGTQD 138

Query: 280 LNTLSVEDVMIKNP--KVILEDTLLTVAMQLLRQHNISVLMVVDDCQ---KAIGIVHFLD 334
           LN + V  +M + P          L VA   L +  +  L VV+  +     +G +    
Sbjct: 139 LNKIPVHIIMTRMPNISYCERSDSLIVAANKLIEREVDSLPVVEPQEGGLTIVGRLTKTT 198

Query: 335 LLRF 338
           + R 
Sbjct: 199 ITRA 202



 Score = 45.3 bits (106), Expect = 0.012,   Method: Composition-based stats.
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ L V+D     P V+ E   +  A+  +   ++  L VVD  +   G++   DLLR
Sbjct: 75  IHNLKVKDF-HSGPVVVPETMTVYDAICFMFSEDVGTLFVVDKNEFLTGVLSRKDLLR 131


>gi|258515155|ref|YP_003191377.1| putative sigma54 specific transcriptional regulator
           [Desulfotomaculum acetoxidans DSM 771]
 gi|257778860|gb|ACV62754.1| putative sigma54 specific transcriptional regulator
           [Desulfotomaculum acetoxidans DSM 771]
          Length = 710

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 22/107 (20%), Positives = 43/107 (40%), Gaps = 6/107 (5%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLN-TLSVEDVMIK 291
           +     + + + I  E +     V+ E  KL G+ T+  I+R   K ++    VE +M +
Sbjct: 14  ISPSHKVCEVVNIFIENKIDGAPVL-ENGKLVGLFTKSHIYRAISKGIDMNTKVEALMTR 72

Query: 292 NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                  D      +       +  L VVD+  + +GI+   D+ + 
Sbjct: 73  EILTGYPDDEFGDVVNA----TVPRLPVVDEKGRVVGIITRGDIAKA 115



 Score = 49.5 bits (117), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 283 LSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
           + V ++M  +P  I     +   + +  ++ I    V+ +  K +G+     + R 
Sbjct: 1   MKVREIMTPDPLTISPSHKVCEVVNIFIENKIDGAPVL-ENGKLVGLFTKSHIYRA 55


>gi|325298754|ref|YP_004258671.1| magnesium transporter [Bacteroides salanitronis DSM 18170]
 gi|324318307|gb|ADY36198.1| magnesium transporter [Bacteroides salanitronis DSM 18170]
          Length = 446

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 23/116 (19%), Positives = 52/116 (44%), Gaps = 9/116 (7%)

Query: 226 SGDSIPLVKIGCPLIDAITILSEKRFGC-----VAVVDEGQKLKGIITEGDIFRNFHKDL 280
            G  + +V     + + +  +  +         V VVD+ ++L+G+       +      
Sbjct: 137 MGTEMVIVNENLSMPECLREMRIQAEDMDEIYYVYVVDDDERLRGVFP----LKKMITSP 192

Query: 281 NTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           +   V+ VM K+P  +  DT L   +Q++ ++++  L VVD   + +G +   D++
Sbjct: 193 SVSKVKHVMKKDPISVHVDTPLDEVVQVIEKYDLVALPVVDSIGRLVGRITVDDVM 248


>gi|292489973|ref|YP_003532865.1| putative transcriptional regulator [Erwinia amylovora CFBP1430]
 gi|291555412|emb|CBA23840.1| putative transcriptional regulator [Erwinia amylovora CFBP1430]
          Length = 283

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 26/129 (20%), Positives = 50/129 (38%), Gaps = 5/129 (3%)

Query: 35  KRGLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSF 94
            + L  L   +  E   Q   AV+ +      + + G+ +S  + S L   L      +F
Sbjct: 123 AQALQQLAMQVSPE---QLEKAVKLLDEADN-IYVIGLRRSFSVASYLTYALRHLERRAF 178

Query: 95  FVHA-AEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVA 153
            +          L M+   D++I +S+S  + E   ++    +     IAIT    S +A
Sbjct: 179 LIDGLGGMFAEQLSMVNPKDVVIAISYSPYAREAVELVELGAKRGAQQIAITDSQVSPLA 238

Query: 154 CHADIVLTL 162
             +D+   +
Sbjct: 239 AFSDVCFVV 247


>gi|47095203|ref|ZP_00232815.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|254832344|ref|ZP_05236999.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes
           10403S]
 gi|254899540|ref|ZP_05259464.1| inosine 5-monophosphate dehydrogenase [Listeria monocytogenes
           J0161]
 gi|254913257|ref|ZP_05263269.1| conserved hypothetical protein [Listeria monocytogenes J2818]
 gi|254937638|ref|ZP_05269335.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           F6900]
 gi|47016548|gb|EAL07469.1| inosine-5'-monophosphate dehydrogenase, putative [Listeria
           monocytogenes str. 1/2a F6854]
 gi|258610238|gb|EEW22846.1| inositol-5-monophosphate dehydrogenase [Listeria monocytogenes
           F6900]
 gi|293591257|gb|EFF99591.1| conserved hypothetical protein [Listeria monocytogenes J2818]
          Length = 502

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 40/180 (22%), Positives = 65/180 (36%), Gaps = 16/180 (8%)

Query: 164 KEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDV 223
           K  ES      P  SAIMQ    D + IAL      S    ++      + +     S V
Sbjct: 42  KGEESAITMNIPLVSAIMQAVSDDNMGIALATEGGVS----FIFG-SQSIESEAAMVSRV 96

Query: 224 MHSGDSIPL----VKIGCPLIDAITILSEKRFGCVAVVDEG---QKLKGIITEGDIFRNF 276
            +      +    +     L D + +  +     VAV ++G    KL GI+T  D     
Sbjct: 97  KNHKAGFVISDSNISPDKTLQDILDLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYR--V 154

Query: 277 HKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
            +      V D M          + T L  A  ++  + ++ L +VDD +  + +V   D
Sbjct: 155 TRMSPDEKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNKNLVHMVFRKD 214


>gi|254579120|ref|XP_002495546.1| ZYRO0B13904p [Zygosaccharomyces rouxii]
 gi|238938436|emb|CAR26613.1| ZYRO0B13904p [Zygosaccharomyces rouxii]
          Length = 524

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 34/174 (19%), Positives = 65/174 (37%), Gaps = 18/174 (10%)

Query: 174 APTTSAIMQLAIGDALAIALLESRNFSENDFYVLHPGGKLGTLFVCASDVMH----SGDS 229
           AP  S+ M       +AI +            ++H              V        + 
Sbjct: 68  APFVSSPMDTVTESEMAIHIALLGGIG-----IIHHNCSAEAQAEMVRKVKKYENGFINH 122

Query: 230 IPLVKIGCPLIDAITILSEKRFGC--VAVVDEGQKL----KGIITEGDIFRNFHKDLNTL 283
             ++     + +A  +  +  F    V V+ E  KL     GI+T  DI   F +D N+L
Sbjct: 123 PIVISPDVTVGEAKAMKQQFGFAGFPVTVLTENGKLYSKLIGIVTSRDI--QFVED-NSL 179

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLR 337
           ++ D+M K+     +   L+   ++L+      L +VD     + ++   DL++
Sbjct: 180 TISDIMTKDVVTGSQGITLSQGNEILKSTKKGKLPIVDSKGNLVSMLSRTDLMK 233


>gi|160931848|ref|ZP_02079241.1| hypothetical protein CLOLEP_00679 [Clostridium leptum DSM 753]
 gi|156869185|gb|EDO62557.1| hypothetical protein CLOLEP_00679 [Clostridium leptum DSM 753]
          Length = 227

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/178 (16%), Positives = 61/178 (34%), Gaps = 12/178 (6%)

Query: 37  GLSSLESSLQGELSFQFHCAVEKIKAIKGRVVITGIGKSGHIGSKLASTLASTGTPSFFV 96
            LS ++             A++ I   K +VV  G G+ G         L   G  + + 
Sbjct: 52  ALSEMQQVFDRMDDKDLQPALDAIINAK-KVVCYGAGREGLGLKFFVMRLMHLGKDAHWA 110

Query: 97  HAAEASHGDLGMITRDDLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACHA 156
               A       +   D++ +    G    +  I    ++    ++ +T+   S +   A
Sbjct: 111 WDDTAP-----SVGEGDVVFISCGPGFYSHVVFIAELCKKAGAKIVLVTAVPDSDMGKVA 165

Query: 157 DIVLTLPKEPESCPHGLAPTTSAI------MQLAIGDALAIALLESRNFSENDFYVLH 208
           D+++ LP         L PT   +        + + D ++  L +  N S+ +    H
Sbjct: 166 DVIVHLPAMAYRAHGDLVPTKQPMGNLYEQSAVILFDCMSRMLKQQMNVSDEEMEKRH 223


>gi|126669067|ref|ZP_01740000.1| diguanylate cyclase with PAS/PAC sensor [Marinobacter sp. ELB17]
 gi|126626469|gb|EAZ97133.1| diguanylate cyclase with PAS/PAC sensor [Marinobacter sp. ELB17]
          Length = 590

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 2/108 (1%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNTLSVEDVMIKN 292
           +     L +A   +  K     A++D  +   GI+TE DI R   ++     V  +  + 
Sbjct: 148 ISGEKTLAEAAASMY-KNCAHAAIIDCEKLGLGILTERDIVRLISRNTGNKVVGPLASRP 206

Query: 293 PKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRFGI 340
              + ED  L  A   L    I  L V++D  + IG+V +  +L  G+
Sbjct: 207 LITVHEDEPLIHARDRLMNLRIRNLAVINDDNQVIGLVGYGQML-AGV 253



 Score = 38.3 bits (88), Expect = 1.7,   Method: Composition-based stats.
 Identities = 25/121 (20%), Positives = 44/121 (36%), Gaps = 10/121 (8%)

Query: 220 ASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKD 279
            S +MHSG  +        +  A  +++E+    + ++     L GI TE D       D
Sbjct: 7   VSRLMHSGALLH-CDPDTTIATAAAMMAERSVSSILIIRNDDVL-GIWTERD---ALSID 61

Query: 280 -----LNTLSVEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLD 334
                +    +  VM      +     +  A    R+      +VV+   KA GI+   D
Sbjct: 62  FTSSSIFAQPISLVMSSPVISVPNYMPMQEAAVKFRETGKRHFLVVNADGKAAGILSQTD 121

Query: 335 L 335
           +
Sbjct: 122 M 122


>gi|119494542|ref|ZP_01624688.1| Cl- channel, voltage gated [Lyngbya sp. PCC 8106]
 gi|119452116|gb|EAW33324.1| Cl- channel, voltage gated [Lyngbya sp. PCC 8106]
          Length = 652

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 32/207 (15%), Positives = 72/207 (34%), Gaps = 18/207 (8%)

Query: 141 LIAITSENKSVVACHADIVLTLPKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFS 200
           ++ + +   S V      +L L +   +    L    +  + +A+ D +  A       +
Sbjct: 421 IVGMATVLASSVRAPLTAILLLFEMTRNYLIILPLMVAVGVSIALMDCIQ-AKSSVGGLN 479

Query: 201 ENDFYVLHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEG 260
                +         +            S   +     LI+A   + + +     V++E 
Sbjct: 480 LQQMGMNLAQQNDQEILHKVPISTLMDFSYLALSDSTSLIEAGQKMIQAKCHTALVIEET 539

Query: 261 QKLKGIITEGDIFRNFHK---------------DLNTLSVEDVMIKNPKVILEDTLLTVA 305
           + L G+IT  DI R+  +                   L + ++       +  D  ++ A
Sbjct: 540 KLLVGVITLADIKRHLIQIQSMLSEKAHSEYTLTATNLKIGEICTSEILYVYPDDSVSEA 599

Query: 306 MQLLRQHNISVLMVV--DDCQKAIGIV 330
            + +R   + +L VV  D+ +K IG++
Sbjct: 600 FEQMRVRGLYLLPVVHPDNPRKIIGVL 626


>gi|118586704|ref|ZP_01544142.1| hypothetical transcriptional regulator, LacI family [Oenococcus
           oeni ATCC BAA-1163]
 gi|118432889|gb|EAV39617.1| hypothetical transcriptional regulator, LacI family [Oenococcus
           oeni ATCC BAA-1163]
          Length = 242

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 9/142 (6%)

Query: 42  ESSLQGELSFQFHCAVEKIKAI---KGRVVITGIGKSGHIGSKLASTLASTGTPSFFVHA 98
                  L  Q+   +  IK +      V   GIG SG +    +   A+ G  SF+   
Sbjct: 86  RDFFNRPLLDQYQNTITDIKNVIENSKMVFFFGIGTSGILAEYGSRQFANFGINSFYNKD 145

Query: 99  AEASHGDLGMITRD---DLIIVLSWSGSSDELKAILYYARRFSIPLIAITSENKSVVACH 155
               +    +I +D    ++IVLS SG + E+   +   +     +I+IT+ + S+VA  
Sbjct: 146 ---PYYPFQLIEKDISSAVMIVLSVSGETHEVIKQITSLKNLKCKIISITNTSYSMVAKL 202

Query: 156 ADIVLTLPKEPESCPHGLAPTT 177
           +DI L+     E  P  +  T+
Sbjct: 203 SDINLSYNIGEEVFPDEINATS 224


>gi|57866558|ref|YP_188180.1| magnesium transporter [Staphylococcus epidermidis RP62A]
 gi|57637216|gb|AAW54004.1| magnesium transporter [Staphylococcus epidermidis RP62A]
          Length = 461

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAV-----VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           K   P+ +A+  + E+      +     V+E ++L G+++  D+        N   +EDV
Sbjct: 157 KSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLIVA----ENDAYIEDV 212

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +               QL+R ++   + VVD     +GI+   D+L
Sbjct: 213 MSERVISANVGDDQEDIAQLMRDYDFIAVPVVDYQNHLLGIITIDDIL 260



 Score = 36.0 bits (82), Expect = 7.5,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLL 336
           +   +M      +   T +  A+  +++       I V+  V++ ++ +G++   DL+
Sbjct: 144 TAGGIMTTEFISLKSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLI 201


>gi|171692695|ref|XP_001911272.1| hypothetical protein [Podospora anserina S mat+]
 gi|170946296|emb|CAP73097.1| unnamed protein product [Podospora anserina S mat+]
          Length = 319

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 21/113 (18%), Positives = 48/113 (42%), Gaps = 9/113 (7%)

Query: 235 IGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNF---HKDLNTLSVEDVMIK 291
           +G  ++D I ++ +     V ++D+  ++  +    D+         D  + +V + + +
Sbjct: 193 MGSSVLDVIHLMVKYNISAVPIIDKDNRVLNLFEAVDVIPCIKGGAYDELSATVGEALSR 252

Query: 292 NP------KVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
                       ED  L      +R+  +  L+VVDD  +  GI+   D+L++
Sbjct: 253 RAEEFGGIYTCNEDDRLDAIFDTIRKSRVHRLIVVDDDNRLKGIISLSDILKY 305



 Score = 41.8 bits (97), Expect = 0.15,   Method: Composition-based stats.
 Identities = 18/109 (16%), Positives = 43/109 (39%), Gaps = 14/109 (12%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQK-----LKGIITEGDIFRNFHKD------LN 281
           V    PL +A   + + R   + +VD   +     +  +IT+  I +    +      L 
Sbjct: 114 VHPMRPLYEACRRMLKTRARRIPLVDRDDETGREMVVSVITQYRILKFIAVNNEQYTMLL 173

Query: 282 TLSVEDV---MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAI 327
              V ++     K+       + +   + L+ ++NIS + ++D   + +
Sbjct: 174 KKPVRELGLGTYKDLATATMGSSVLDVIHLMVKYNISAVPIIDKDNRVL 222


>gi|27467616|ref|NP_764253.1| Mg2+ transporter [Staphylococcus epidermidis ATCC 12228]
 gi|242242286|ref|ZP_04796731.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus epidermidis W23144]
 gi|251810370|ref|ZP_04824843.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|282875498|ref|ZP_06284369.1| magnesium transporter [Staphylococcus epidermidis SK135]
 gi|293367011|ref|ZP_06613685.1| MgtE family magnesium transporter [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|27315160|gb|AAO04295.1|AE016746_85 Mg2+ transporter [Staphylococcus epidermidis ATCC 12228]
 gi|242234242|gb|EES36554.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus epidermidis W23144]
 gi|251806107|gb|EES58764.1| MgtE family magnesium (Mg2+)/cobalt (Co2+) transporter-E
           [Staphylococcus epidermidis BCM-HMP0060]
 gi|281295525|gb|EFA88048.1| magnesium transporter [Staphylococcus epidermidis SK135]
 gi|291318866|gb|EFE59238.1| MgtE family magnesium transporter [Staphylococcus epidermidis
           M23864:W2(grey)]
 gi|329729836|gb|EGG66229.1| magnesium transporter [Staphylococcus epidermidis VCU144]
 gi|329733400|gb|EGG69733.1| magnesium transporter [Staphylococcus epidermidis VCU028]
 gi|329738098|gb|EGG74316.1| magnesium transporter [Staphylococcus epidermidis VCU045]
          Length = 461

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 9/108 (8%)

Query: 234 KIGCPLIDAITILSEKRFGCVAV-----VDEGQKLKGIITEGDIFRNFHKDLNTLSVEDV 288
           K   P+ +A+  + E+      +     V+E ++L G+++  D+        N   +EDV
Sbjct: 157 KSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLIVA----ENDAYIEDV 212

Query: 289 MIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           M +               QL+R ++   + VVD     +GI+   D+L
Sbjct: 213 MSERVISANVGDDQEDIAQLMRDYDFIAVPVVDYQNHLLGIITIDDIL 260



 Score = 36.0 bits (82), Expect = 7.6,   Method: Composition-based stats.
 Identities = 9/58 (15%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 284 SVEDVMIKNPKVILEDTLLTVAMQLLRQHN-----ISVLMVVDDCQKAIGIVHFLDLL 336
           +   +M      +   T +  A+  +++       I V+  V++ ++ +G++   DL+
Sbjct: 144 TAGGIMTTEFISLKSTTPVKEALIHVKEQAPDAETIYVIFAVNEDEQLVGVLSLRDLI 201


>gi|84386613|ref|ZP_00989639.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           splendidus 12B01]
 gi|84378419|gb|EAP95276.1| inosine monophosphate dehydrogenase-related protein [Vibrio
           splendidus 12B01]
          Length = 138

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 7/109 (6%)

Query: 235 IGCPLIDAI-TILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHK----DLNTLSVEDVM 289
              PL  A+  ++S    G   V+D+ +++ G ++E D+     K      +T  V D M
Sbjct: 19  PDMPLSLALDRVMSSHHMGG-PVIDDNEQVIGFLSEQDLLEKLVKVSYFCQDTHVVGDCM 77

Query: 290 IKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGIVHFLDLLRF 338
            +    +  D  +     +++        V+D+ +K +GI+   D+LR 
Sbjct: 78  YQEVLSVSPDLSIIELADMMQVGKPKAYPVLDN-KKLVGIITRTDVLRA 125



 Score = 49.9 bits (118), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)

Query: 280 LNTLSVEDVMIKNPKVILEDTLLTVAM-QLLRQHNISVLMVVDDCQKAIGIVHFLDLL 336
           ++++ V+D M         D  L++A+ +++  H++    V+DD ++ IG +   DLL
Sbjct: 1   MHSIKVKDYMTPQVVTFTPDMPLSLALDRVMSSHHMGG-PVIDDNEQVIGFLSEQDLL 57



 Score = 39.1 bits (90), Expect = 0.86,   Method: Composition-based stats.
 Identities = 14/50 (28%), Positives = 23/50 (46%), Gaps = 1/50 (2%)

Query: 233 VKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIFRNFHKDLNT 282
           V     +I+   ++   +     V+D  +KL GIIT  D+ R   K+L  
Sbjct: 84  VSPDLSIIELADMMQVGKPKAYPVLD-NKKLVGIITRTDVLRAIGKNLEE 132


>gi|296086527|emb|CBI32116.3| unnamed protein product [Vitis vinifera]
          Length = 355

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 20/92 (21%), Positives = 46/92 (50%), Gaps = 4/92 (4%)

Query: 232 LVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGIITEGDIF-RNFHKDLN--TLSVEDV 288
           ++  G  + DA  ++S ++   V + D    L GI+ + DI  R   ++L     +V  +
Sbjct: 52  MIPEGITVSDACRMMSARKVDVVLLTDSNAILSGIVIDKDIATRVIVEELRPEQTAVSKI 111

Query: 289 MIKNPKVILEDTLLTVAMQLL-RQHNISVLMV 319
           M ++P ++  D+L   A++ + +   +  ++V
Sbjct: 112 MTRHPILVNSDSLAIEALEKMVQGKRLRSMVV 143


>gi|226947098|ref|YP_002802171.1| HPP domain and CBS domain pair-containing protein [Azotobacter
           vinelandii DJ]
 gi|226722025|gb|ACO81196.1| HPP domain and CBS domain pair-containing protein [Azotobacter
           vinelandii DJ]
          Length = 374

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 37/189 (19%), Positives = 60/189 (31%), Gaps = 14/189 (7%)

Query: 163 PKEPESCPHGLAPTTSAIMQLAIGDALAIALLESRNFSENDF----YVLHPGGKLGTLFV 218
           P+E         PT     + A  DA      E  + +  D      +L   G       
Sbjct: 176 PRENPHQTRDPLPTERLEPRRAALDAALEDFGEYLDITREDLERLVRLLERNGF-RHSLG 234

Query: 219 CASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVD-EGQKLKGIITEGDIFRNFH 277
                      +          DA  +L + R   + V+D   ++L GI+  GD+     
Sbjct: 235 QVVAADIMSRDLRWATPETSFEDAWKLLRDHRLQQLPVIDGASRRLLGIVERGDLLERSR 294

Query: 278 KDLNTLS--------VEDVMIKNPKVILEDTLLTVAMQLLRQHNISVLMVVDDCQKAIGI 329
                 +        +   M     V   DT L   +  L +  +  L VVDD  + +G+
Sbjct: 295 PGFAWPAFGRPARSGIGSAMGAPTVVAHRDTHLAELVLPLSEQGLHCLPVVDDDARLVGL 354

Query: 330 VHFLDLLRF 338
           V   DL+  
Sbjct: 355 VTQTDLIAA 363



 Score = 47.6 bits (112), Expect = 0.003,   Method: Composition-based stats.
 Identities = 18/83 (21%), Positives = 34/83 (40%), Gaps = 3/83 (3%)

Query: 206 VLHPGGKL-GTLFVCASDVMHSGDSIPLV-KIGCPLIDAITILSEKRFGCVAVVDEGQKL 263
              PG           S +  +  +  +V      L + +  LSE+   C+ VVD+  +L
Sbjct: 292 RSRPGFAWPAFGRPARSGIGSAMGAPTVVAHRDTHLAELVLPLSEQGLHCLPVVDDDARL 351

Query: 264 KGIITEGDIFRNFHK-DLNTLSV 285
            G++T+ D+    ++  L  L  
Sbjct: 352 VGLVTQTDLIAALYRLWLKQLPA 374


>gi|329767446|ref|ZP_08258971.1| hypothetical protein HMPREF0428_00668 [Gemella haemolysans M341]
 gi|328836135|gb|EGF85826.1| hypothetical protein HMPREF0428_00668 [Gemella haemolysans M341]
          Length = 205

 Score = 63.8 bits (154), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 7/126 (5%)

Query: 207 LHPGGKLGTLFVCASDVMHSGDSIPLVKIGCPLIDAITILSEKRFGCVAVVDEGQKLKGI 266
             PG       +    V          K      D ++ L     G + +VDE   L G+
Sbjct: 63  FSPGE--QREEIKNKLVKDVMGIAITAKSTANFSDVLSKLFIYDVGTIFIVDENNHLAGV 120

Query: 267 ITEGDIFR-NFHKDLNTLSVEDVMIK--NPKVILEDTLLTVAMQLLRQHNISVLMVV--D 321
            +  D+ + + + D   L +   M +  N   I ED L++ A++ L  H I  L VV  +
Sbjct: 121 TSRKDMLKLSRNADGQNLPIVLAMTRVPNVIYIYEDELVSDALRKLILHEIDCLPVVRDE 180

Query: 322 DCQKAI 327
           D  K I
Sbjct: 181 DGGKVI 186


  Database: nr
    Posted date:  May 22, 2011 12:22 AM
  Number of letters in database: 999,999,966
  Number of sequences in database:  2,987,313
  
  Database: /data/usr2/db/fasta/nr.01
    Posted date:  May 22, 2011 12:30 AM
  Number of letters in database: 999,999,796
  Number of sequences in database:  2,903,041
  
  Database: /data/usr2/db/fasta/nr.02
    Posted date:  May 22, 2011 12:36 AM
  Number of letters in database: 999,999,281
  Number of sequences in database:  2,904,016
  
  Database: /data/usr2/db/fasta/nr.03
    Posted date:  May 22, 2011 12:41 AM
  Number of letters in database: 999,999,960
  Number of sequences in database:  2,935,328
  
  Database: /data/usr2/db/fasta/nr.04
    Posted date:  May 22, 2011 12:46 AM
  Number of letters in database: 842,794,627
  Number of sequences in database:  2,394,679
  
Lambda     K      H
   0.316    0.150    0.428 

Lambda     K      H
   0.267   0.0456    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,535,161,694
Number of Sequences: 14124377
Number of extensions: 308635015
Number of successful extensions: 996964
Number of sequences better than 10.0: 10000
Number of HSP's better than 10.0 without gapping: 22653
Number of HSP's successfully gapped in prelim test: 12749
Number of HSP's that attempted gapping in prelim test: 901373
Number of HSP's gapped (non-prelim): 66053
length of query: 341
length of database: 4,842,793,630
effective HSP length: 139
effective length of query: 202
effective length of database: 2,879,505,227
effective search space: 581660055854
effective search space used: 581660055854
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.4 bits)
S2: 82 (36.0 bits)